#transId geneId source chrom start end strand proteinId geneName transcriptName geneType transcriptType MGP_NODShiLtJ_T0012094.1 MGP_NODShiLtJ_G0010202.1 mouse_genomes_project 1 137592525 137593045 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000438.1 MGP_NODShiLtJ_G0000374.1 mouse_genomes_project 1 40713167 40713513 - TEC TEC MGP_NODShiLtJ_T0000643.1 MGP_NODShiLtJ_G0000577.1 mouse_genomes_project 1 158362069 158365729 - TEC TEC MGP_NODShiLtJ_T0012149.1 MGP_NODShiLtJ_G0010257.1 mouse_genomes_project 1 168370594 168371195 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020304.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83831969 83846975 + MGP_NODShiLtJ_P0020304 Slc11a1 protein_coding protein_coding MGP_NODShiLtJ_T0020305.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83831977 83847272 + Slc11a1 protein_coding retained_intron MGP_NODShiLtJ_T0020306.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83831977 83847285 + MGP_NODShiLtJ_P0020306 Slc11a1 protein_coding protein_coding MGP_NODShiLtJ_T0020307.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83831999 83847271 + Slc11a1 protein_coding retained_intron MGP_NODShiLtJ_T0020308.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83832027 83840622 + Slc11a1 protein_coding processed_transcript MGP_NODShiLtJ_T0020309.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83832346 83833665 + Slc11a1 protein_coding processed_transcript MGP_NODShiLtJ_T0020310.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83833431 83836565 + Slc11a1 protein_coding processed_transcript MGP_NODShiLtJ_T0020311.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83840446 83845393 + Slc11a1 protein_coding retained_intron MGP_NODShiLtJ_T0020312.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83844253 83845054 + Slc11a1 protein_coding retained_intron MGP_NODShiLtJ_T0020313.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83844560 83845393 + Slc11a1 protein_coding processed_transcript MGP_NODShiLtJ_T0020314.1 MGP_NODShiLtJ_G0016015.1 mouse_genomes_project 1 83844819 83846417 + Slc11a1 protein_coding processed_transcript MGP_NODShiLtJ_T0022258.1 MGP_NODShiLtJ_G0016424.1 mouse_genomes_project 1 159291263 159311130 + MGP_NODShiLtJ_P0022258 Zbtb41 protein_coding protein_coding MGP_NODShiLtJ_T0022259.1 MGP_NODShiLtJ_G0016424.1 mouse_genomes_project 1 159291357 159323101 + MGP_NODShiLtJ_P0022259 Zbtb41 protein_coding protein_coding MGP_NODShiLtJ_T0022260.1 MGP_NODShiLtJ_G0016424.1 mouse_genomes_project 1 159292629 159318427 + MGP_NODShiLtJ_P0022260 Zbtb41 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021186.1 MGP_NODShiLtJ_G0016191.1 mouse_genomes_project 1 104095626 104096635 + MGP_NODShiLtJ_P0021186 Olfr1410 protein_coding protein_coding MGP_NODShiLtJ_T0021187.1 MGP_NODShiLtJ_G0016191.1 mouse_genomes_project 1 104095626 104096595 + MGP_NODShiLtJ_P0021187 Olfr1410 protein_coding protein_coding MGP_NODShiLtJ_T0098529.1 MGP_NODShiLtJ_G0036923.1 mouse_genomes_project 1 71274138 71274241 - Gm22281 snRNA snRNA MGP_NODShiLtJ_T0023416.1 MGP_NODShiLtJ_G0016663.1 mouse_genomes_project 1 198181792 198187554 - MGP_NODShiLtJ_P0023416 Fcrl6 protein_coding protein_coding MGP_NODShiLtJ_T0023417.1 MGP_NODShiLtJ_G0016663.1 mouse_genomes_project 1 198182687 198187550 - Fcrl6 protein_coding retained_intron MGP_NODShiLtJ_T0023418.1 MGP_NODShiLtJ_G0016663.1 mouse_genomes_project 1 198183126 198187554 - Fcrl6 protein_coding retained_intron MGP_NODShiLtJ_T0005988.1 MGP_NODShiLtJ_G0005009.1 mouse_genomes_project 1 218593687 218595673 + Gm31373 lincRNA lincRNA MGP_NODShiLtJ_T0011765.1 MGP_NODShiLtJ_G0009873.1 mouse_genomes_project 1 7768255 7769425 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000756.1 MGP_NODShiLtJ_G0000688.1 mouse_genomes_project 1 209477044 209481216 + TEC TEC MGP_NODShiLtJ_T0021347.1 MGP_NODShiLtJ_G0016227.1 mouse_genomes_project 1 107669641 107806311 - MGP_NODShiLtJ_P0021347 St8sia4 protein_coding protein_coding MGP_NODShiLtJ_T0021348.1 MGP_NODShiLtJ_G0016227.1 mouse_genomes_project 1 107717837 107806275 - MGP_NODShiLtJ_P0021348 St8sia4 protein_coding protein_coding MGP_NODShiLtJ_T0021349.1 MGP_NODShiLtJ_G0016227.1 mouse_genomes_project 1 107802704 107806305 - St8sia4 protein_coding retained_intron MGP_NODShiLtJ_T0020101.1 MGP_NODShiLtJ_G0015976.1 mouse_genomes_project 1 73092087 73165644 + MGP_NODShiLtJ_P0020101 Pth2r protein_coding protein_coding MGP_NODShiLtJ_T0020102.1 MGP_NODShiLtJ_G0015976.1 mouse_genomes_project 1 73125964 73213712 + MGP_NODShiLtJ_P0020102 Pth2r protein_coding protein_coding MGP_NODShiLtJ_T0011749.1 MGP_NODShiLtJ_G0009857.1 mouse_genomes_project 1 4780634 4780959 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101475.1 MGP_NODShiLtJ_G0039645.1 mouse_genomes_project 1 78983089 78983177 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011135.1 MGP_NODShiLtJ_G0009268.1 mouse_genomes_project 1 66787650 66787735 + Gm24545 misc_RNA misc_RNA MGP_NODShiLtJ_T0023893.1 MGP_NODShiLtJ_G0016786.1 mouse_genomes_project 1 212594275 212608159 + MGP_NODShiLtJ_P0023893 Slc30a10 protein_coding protein_coding MGP_NODShiLtJ_T0002714.1 MGP_NODShiLtJ_G0002580.1 mouse_genomes_project 1 16014507 16242332 + antisense antisense MGP_NODShiLtJ_T0005708.1 MGP_NODShiLtJ_G0004788.1 mouse_genomes_project 1 78265824 78268853 + Gm28497 lincRNA lincRNA MGP_NODShiLtJ_T0005845.1 MGP_NODShiLtJ_G0004897.1 mouse_genomes_project 1 153123735 153128308 + Gm28441 lincRNA lincRNA MGP_NODShiLtJ_T0021184.1 MGP_NODShiLtJ_G0016189.1 mouse_genomes_project 1 104074974 104076065 + MGP_NODShiLtJ_P0021184 Olfr1412 protein_coding protein_coding MGP_NODShiLtJ_T0020278.1 MGP_NODShiLtJ_G0016011.1 mouse_genomes_project 1 83719898 83724735 - MGP_NODShiLtJ_P0020278 Aamp protein_coding protein_coding MGP_NODShiLtJ_T0020279.1 MGP_NODShiLtJ_G0016011.1 mouse_genomes_project 1 83719904 83724013 - Aamp protein_coding retained_intron MGP_NODShiLtJ_T0020280.1 MGP_NODShiLtJ_G0016011.1 mouse_genomes_project 1 83719904 83724677 - MGP_NODShiLtJ_P0020280 Aamp protein_coding protein_coding MGP_NODShiLtJ_T0020281.1 MGP_NODShiLtJ_G0016011.1 mouse_genomes_project 1 83720991 83723976 - MGP_NODShiLtJ_P0020281 Aamp protein_coding protein_coding MGP_NODShiLtJ_T0020282.1 MGP_NODShiLtJ_G0016011.1 mouse_genomes_project 1 83721118 83723201 - Aamp protein_coding retained_intron MGP_NODShiLtJ_T0020283.1 MGP_NODShiLtJ_G0016011.1 mouse_genomes_project 1 83723254 83724418 - MGP_NODShiLtJ_P0020283 Aamp protein_coding protein_coding MGP_NODShiLtJ_T0021099.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102677294 102702817 + Ube2f protein_coding retained_intron MGP_NODShiLtJ_T0021100.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102677301 102713087 + MGP_NODShiLtJ_P0021100 Ube2f protein_coding protein_coding MGP_NODShiLtJ_T0021101.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102677309 102713372 + MGP_NODShiLtJ_P0021101 Ube2f protein_coding protein_coding MGP_NODShiLtJ_T0021102.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102677327 102717690 + MGP_NODShiLtJ_P0021102 Ube2f protein_coding protein_coding MGP_NODShiLtJ_T0021103.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102677355 102713120 + MGP_NODShiLtJ_P0021103 Ube2f protein_coding protein_coding MGP_NODShiLtJ_T0021104.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102677556 102713274 + MGP_NODShiLtJ_P0021104 Ube2f protein_coding protein_coding MGP_NODShiLtJ_T0021105.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102677646 102692928 + MGP_NODShiLtJ_P0021105 Ube2f protein_coding protein_coding MGP_NODShiLtJ_T0021106.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102692277 102703795 + Ube2f protein_coding retained_intron MGP_NODShiLtJ_T0021107.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102702286 102703903 + Ube2f protein_coding retained_intron MGP_NODShiLtJ_T0021108.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102703448 102712738 + Ube2f protein_coding retained_intron MGP_NODShiLtJ_T0021109.1 MGP_NODShiLtJ_G0016172.1 mouse_genomes_project 1 102711002 102712363 + Ube2f protein_coding retained_intron MGP_NODShiLtJ_T0023458.1 MGP_NODShiLtJ_G0016682.1 mouse_genomes_project 1 199594134 199850702 - MGP_NODShiLtJ_P0023458 Ifi204 protein_coding protein_coding MGP_NODShiLtJ_T0023459.1 MGP_NODShiLtJ_G0016682.1 mouse_genomes_project 1 199607491 199850769 - Ifi204 protein_coding retained_intron MGP_NODShiLtJ_T0000506.1 MGP_NODShiLtJ_G0000442.1 mouse_genomes_project 1 83727537 83727856 - TEC TEC MGP_NODShiLtJ_T0012157.1 MGP_NODShiLtJ_G0010265.1 mouse_genomes_project 1 172261344 172262880 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020738.1 MGP_NODShiLtJ_G0016090.1 mouse_genomes_project 1 93531840 93556577 + Daw1 protein_coding retained_intron MGP_NODShiLtJ_T0020739.1 MGP_NODShiLtJ_G0016090.1 mouse_genomes_project 1 93531850 93590145 + MGP_NODShiLtJ_P0020739 Daw1 protein_coding protein_coding MGP_NODShiLtJ_T0020740.1 MGP_NODShiLtJ_G0016090.1 mouse_genomes_project 1 93531850 93590151 + MGP_NODShiLtJ_P0020740 Daw1 protein_coding protein_coding MGP_NODShiLtJ_T0020741.1 MGP_NODShiLtJ_G0016090.1 mouse_genomes_project 1 93531857 93590147 + MGP_NODShiLtJ_P0020741 Daw1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020742.1 MGP_NODShiLtJ_G0016090.1 mouse_genomes_project 1 93531869 93590151 + MGP_NODShiLtJ_P0020742 Daw1 protein_coding protein_coding MGP_NODShiLtJ_T0021667.1 MGP_NODShiLtJ_G0016297.1 mouse_genomes_project 1 146543695 146701856 - MGP_NODShiLtJ_P0021667 Zranb3 protein_coding protein_coding MGP_NODShiLtJ_T0021668.1 MGP_NODShiLtJ_G0016297.1 mouse_genomes_project 1 146544181 146702395 - MGP_NODShiLtJ_P0021668 Zranb3 protein_coding protein_coding MGP_NODShiLtJ_T0021669.1 MGP_NODShiLtJ_G0016297.1 mouse_genomes_project 1 146555486 146564363 - Zranb3 protein_coding processed_transcript MGP_NODShiLtJ_T0021670.1 MGP_NODShiLtJ_G0016297.1 mouse_genomes_project 1 146578668 146702441 - Zranb3 protein_coding processed_transcript MGP_NODShiLtJ_T0021671.1 MGP_NODShiLtJ_G0016297.1 mouse_genomes_project 1 146588000 146701857 - Zranb3 protein_coding retained_intron MGP_NODShiLtJ_T0021672.1 MGP_NODShiLtJ_G0016297.1 mouse_genomes_project 1 146588387 146611660 - Zranb3 protein_coding processed_transcript MGP_NODShiLtJ_T0021673.1 MGP_NODShiLtJ_G0016297.1 mouse_genomes_project 1 146655882 146701848 - Zranb3 protein_coding retained_intron MGP_NODShiLtJ_T0000504.1 MGP_NODShiLtJ_G0000440.1 mouse_genomes_project 1 81065084 81068605 - TEC TEC MGP_NODShiLtJ_T0005866.1 MGP_NODShiLtJ_G0004914.1 mouse_genomes_project 1 158453229 158498605 - Gm5833 lincRNA lincRNA MGP_NODShiLtJ_T0005867.1 MGP_NODShiLtJ_G0004914.1 mouse_genomes_project 1 158487939 158498593 - Gm5833 lincRNA lincRNA MGP_NODShiLtJ_T0098477.1 MGP_NODShiLtJ_G0036875.1 mouse_genomes_project 1 216640977 216641650 - 2900042K21Rik sense_overlapping sense_overlapping MGP_NODShiLtJ_T0022218.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157799353 157866323 - Ptprc protein_coding retained_intron MGP_NODShiLtJ_T0022219.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157799899 157931438 - MGP_NODShiLtJ_P0022219 Ptprc protein_coding protein_coding MGP_NODShiLtJ_T0022220.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157799905 157931399 - MGP_NODShiLtJ_P0022220 Ptprc protein_coding protein_coding MGP_NODShiLtJ_T0022221.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157799912 157931432 - MGP_NODShiLtJ_P0022221 Ptprc protein_coding protein_coding MGP_NODShiLtJ_T0022222.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157861923 157865355 - Ptprc protein_coding retained_intron MGP_NODShiLtJ_T0022223.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157862145 157931366 - MGP_NODShiLtJ_P0022223 Ptprc protein_coding protein_coding MGP_NODShiLtJ_T0022224.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157867218 157870602 - Ptprc protein_coding retained_intron MGP_NODShiLtJ_T0022225.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157867719 157931432 - MGP_NODShiLtJ_P0022225 Ptprc protein_coding protein_coding MGP_NODShiLtJ_T0022226.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157869354 157931431 - Ptprc protein_coding retained_intron MGP_NODShiLtJ_T0022227.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157877938 157931833 - Ptprc protein_coding retained_intron MGP_NODShiLtJ_T0022228.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157928107 157931321 - Ptprc protein_coding retained_intron MGP_NODShiLtJ_T0022229.1 MGP_NODShiLtJ_G0016417.1 mouse_genomes_project 1 157928874 157931381 - Ptprc protein_coding retained_intron MGP_NODShiLtJ_T0005855.1 MGP_NODShiLtJ_G0004907.1 mouse_genomes_project 1 156160558 156163111 - Platr23 lincRNA lincRNA MGP_NODShiLtJ_T0011993.1 MGP_NODShiLtJ_G0010101.1 mouse_genomes_project 1 89832700 89833178 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098503.1 MGP_NODShiLtJ_G0036897.1 mouse_genomes_project 1 1910443 1910550 + Gm22307 snRNA snRNA MGP_NODShiLtJ_T0020317.1 MGP_NODShiLtJ_G0016017.1 mouse_genomes_project 1 83871608 83898217 + MGP_NODShiLtJ_P0020317 Vil1 protein_coding protein_coding MGP_NODShiLtJ_T0020318.1 MGP_NODShiLtJ_G0016017.1 mouse_genomes_project 1 83881272 83885751 + MGP_NODShiLtJ_P0020318 Vil1 protein_coding protein_coding MGP_NODShiLtJ_T0020319.1 MGP_NODShiLtJ_G0016017.1 mouse_genomes_project 1 83883643 83885744 + Vil1 protein_coding retained_intron MGP_NODShiLtJ_T0020320.1 MGP_NODShiLtJ_G0016017.1 mouse_genomes_project 1 83886418 83888599 + Vil1 protein_coding retained_intron MGP_NODShiLtJ_T0020899.1 MGP_NODShiLtJ_G0016128.1 mouse_genomes_project 1 98018321 98023414 + MGP_NODShiLtJ_P0020899 Prss56 protein_coding protein_coding MGP_NODShiLtJ_T0000583.1 MGP_NODShiLtJ_G0000519.1 mouse_genomes_project 1 141443541 141450383 - TEC TEC MGP_NODShiLtJ_T0021737.1 MGP_NODShiLtJ_G0016311.1 mouse_genomes_project 1 149665577 149673640 + MGP_NODShiLtJ_P0021737 Yod1 protein_coding protein_coding MGP_NODShiLtJ_T0022162.1 MGP_NODShiLtJ_G0016405.1 mouse_genomes_project 1 155493474 155520411 + MGP_NODShiLtJ_P0022162 Tmem9 protein_coding protein_coding MGP_NODShiLtJ_T0022163.1 MGP_NODShiLtJ_G0016405.1 mouse_genomes_project 1 155503246 155521486 + MGP_NODShiLtJ_P0022163 Tmem9 protein_coding protein_coding MGP_NODShiLtJ_T0022164.1 MGP_NODShiLtJ_G0016405.1 mouse_genomes_project 1 155503341 155520436 + MGP_NODShiLtJ_P0022164 Tmem9 protein_coding protein_coding MGP_NODShiLtJ_T0022165.1 MGP_NODShiLtJ_G0016405.1 mouse_genomes_project 1 155513147 155520543 + Tmem9 protein_coding retained_intron MGP_NODShiLtJ_T0022166.1 MGP_NODShiLtJ_G0016405.1 mouse_genomes_project 1 155519411 155520924 + Tmem9 protein_coding processed_transcript MGP_NODShiLtJ_T0023739.1 MGP_NODShiLtJ_G0016753.1 mouse_genomes_project 1 208062246 208108936 - MGP_NODShiLtJ_P0023739 Wdr26 protein_coding protein_coding MGP_NODShiLtJ_T0023740.1 MGP_NODShiLtJ_G0016753.1 mouse_genomes_project 1 208062250 208108821 - MGP_NODShiLtJ_P0023740 Wdr26 protein_coding protein_coding MGP_NODShiLtJ_T0023741.1 MGP_NODShiLtJ_G0016753.1 mouse_genomes_project 1 208067704 208108810 - MGP_NODShiLtJ_P0023741 Wdr26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023742.1 MGP_NODShiLtJ_G0016753.1 mouse_genomes_project 1 208068282 208074874 - MGP_NODShiLtJ_P0023742 Wdr26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023743.1 MGP_NODShiLtJ_G0016753.1 mouse_genomes_project 1 208071014 208074347 - MGP_NODShiLtJ_P0023743 Wdr26 protein_coding protein_coding MGP_NODShiLtJ_T0023744.1 MGP_NODShiLtJ_G0016753.1 mouse_genomes_project 1 208072914 208075004 - Wdr26 protein_coding processed_transcript MGP_NODShiLtJ_T0023745.1 MGP_NODShiLtJ_G0016753.1 mouse_genomes_project 1 208079186 208085800 - Wdr26 protein_coding retained_intron MGP_NODShiLtJ_T0023746.1 MGP_NODShiLtJ_G0016753.1 mouse_genomes_project 1 208092302 208099486 - Wdr26 protein_coding retained_intron MGP_NODShiLtJ_T0101499.1 MGP_NODShiLtJ_G0039669.1 mouse_genomes_project 1 149615063 149630970 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012085.1 MGP_NODShiLtJ_G0010193.1 mouse_genomes_project 1 136136426 136136740 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002838.1 MGP_NODShiLtJ_G0002674.1 mouse_genomes_project 1 151241219 151244516 + Gm29629 antisense antisense MGP_NODShiLtJ_T0009423.1 MGP_NODShiLtJ_G0007556.1 mouse_genomes_project 1 97039959 97040106 - Mir3535 miRNA miRNA MGP_NODShiLtJ_T0000686.1 MGP_NODShiLtJ_G0000620.1 mouse_genomes_project 1 182787293 182790389 - TEC TEC MGP_NODShiLtJ_T0012051.1 MGP_NODShiLtJ_G0010159.1 mouse_genomes_project 1 120110926 120111543 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022459.1 MGP_NODShiLtJ_G0016466.1 mouse_genomes_project 1 176867903 176986468 - MGP_NODShiLtJ_P0022459 Lamc1 protein_coding protein_coding MGP_NODShiLtJ_T0022460.1 MGP_NODShiLtJ_G0016466.1 mouse_genomes_project 1 176867903 176878125 - MGP_NODShiLtJ_P0022460 Lamc1 protein_coding protein_coding MGP_NODShiLtJ_T0022461.1 MGP_NODShiLtJ_G0016466.1 mouse_genomes_project 1 176877741 176878399 - Lamc1 protein_coding retained_intron MGP_NODShiLtJ_T0022462.1 MGP_NODShiLtJ_G0016466.1 mouse_genomes_project 1 176877795 176888041 - MGP_NODShiLtJ_P0022462 Lamc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022463.1 MGP_NODShiLtJ_G0016466.1 mouse_genomes_project 1 176897384 176899228 - Lamc1 protein_coding retained_intron MGP_NODShiLtJ_T0021696.1 MGP_NODShiLtJ_G0016301.1 mouse_genomes_project 1 146969233 146997780 - MGP_NODShiLtJ_P0021696 Mcm6 protein_coding protein_coding MGP_NODShiLtJ_T0021697.1 MGP_NODShiLtJ_G0016301.1 mouse_genomes_project 1 146969236 146997763 - MGP_NODShiLtJ_P0021697 Mcm6 protein_coding protein_coding MGP_NODShiLtJ_T0021698.1 MGP_NODShiLtJ_G0016301.1 mouse_genomes_project 1 146977032 146983210 - Mcm6 protein_coding retained_intron MGP_NODShiLtJ_T0021699.1 MGP_NODShiLtJ_G0016301.1 mouse_genomes_project 1 146978587 146980631 - Mcm6 protein_coding retained_intron MGP_NODShiLtJ_T0000486.1 MGP_NODShiLtJ_G0000422.1 mouse_genomes_project 1 70855651 70856130 - TEC TEC MGP_NODShiLtJ_T0099733.1 MGP_NODShiLtJ_G0038127.1 mouse_genomes_project 1 9406146 9406237 + Gm22963 snoRNA snoRNA MGP_NODShiLtJ_T0002842.1 MGP_NODShiLtJ_G0002678.1 mouse_genomes_project 1 152457312 152476925 - Gm19461 antisense antisense MGP_NODShiLtJ_T0002843.1 MGP_NODShiLtJ_G0002678.1 mouse_genomes_project 1 152458122 152464043 - Gm19461 antisense antisense MGP_NODShiLtJ_T0002844.1 MGP_NODShiLtJ_G0002678.1 mouse_genomes_project 1 152460817 152461207 - Gm19461 antisense antisense MGP_NODShiLtJ_T0002845.1 MGP_NODShiLtJ_G0002678.1 mouse_genomes_project 1 152461197 152463277 - Gm19461 antisense antisense MGP_NODShiLtJ_T0002846.1 MGP_NODShiLtJ_G0002678.1 mouse_genomes_project 1 152463465 152465596 - Gm19461 antisense antisense MGP_NODShiLtJ_T0098245.1 MGP_NODShiLtJ_G0036656.1 mouse_genomes_project 1 190449315 190452390 - Gm37864 sense_intronic sense_intronic MGP_NODShiLtJ_T0011884.1 MGP_NODShiLtJ_G0009992.1 mouse_genomes_project 1 50239879 50245559 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020831.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96732514 96738856 + Psmd1 protein_coding retained_intron MGP_NODShiLtJ_T0020832.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96732514 96739740 + Psmd1 protein_coding processed_transcript MGP_NODShiLtJ_T0020833.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96732746 96802650 + MGP_NODShiLtJ_P0020833 Psmd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020834.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96732746 96808952 + MGP_NODShiLtJ_P0020834 Psmd1 protein_coding protein_coding MGP_NODShiLtJ_T0020835.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96732768 96735790 + Psmd1 protein_coding retained_intron MGP_NODShiLtJ_T0020836.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96732819 96740364 + Psmd1 protein_coding retained_intron MGP_NODShiLtJ_T0020837.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96732998 96744826 + Psmd1 protein_coding processed_transcript MGP_NODShiLtJ_T0020840.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96779998 96802701 + Psmd1 protein_coding processed_transcript MGP_NODShiLtJ_T0020841.1 MGP_NODShiLtJ_G0016111.1 mouse_genomes_project 1 96797816 96802668 + Psmd1 protein_coding retained_intron MGP_NODShiLtJ_T0005609.1 MGP_NODShiLtJ_G0004716.1 mouse_genomes_project 1 29244823 29277214 + lincRNA lincRNA MGP_NODShiLtJ_T0011976.1 MGP_NODShiLtJ_G0010084.1 mouse_genomes_project 1 80693911 80693989 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022878.1 MGP_NODShiLtJ_G0016537.1 mouse_genomes_project 1 187635346 187658876 - MGP_NODShiLtJ_P0022878 Fmo6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022879.1 MGP_NODShiLtJ_G0016537.1 mouse_genomes_project 1 187635518 187658579 - MGP_NODShiLtJ_P0022879 Fmo6 protein_coding protein_coding MGP_NODShiLtJ_T0018609.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4209843 4615245 + MGP_NODShiLtJ_P0018609 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018610.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4209943 4615251 + MGP_NODShiLtJ_P0018610 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018611.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4471795 4615251 + MGP_NODShiLtJ_P0018611 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018612.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4471797 4541862 + MGP_NODShiLtJ_P0018612 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018613.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4471814 4541987 + MGP_NODShiLtJ_P0018613 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018614.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4471845 4613781 + MGP_NODShiLtJ_P0018614 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018615.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4471846 4611727 + MGP_NODShiLtJ_P0018615 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018616.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4477998 4550625 + MGP_NODShiLtJ_P0018616 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018617.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4480703 4615251 + MGP_NODShiLtJ_P0018617 St18 protein_coding protein_coding MGP_NODShiLtJ_T0018618.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4550727 4558351 + MGP_NODShiLtJ_P0018618 St18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018619.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4566908 4585120 + St18 protein_coding processed_transcript MGP_NODShiLtJ_T0018620.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4577173 4600757 + St18 protein_coding processed_transcript MGP_NODShiLtJ_T0018621.1 MGP_NODShiLtJ_G0015688.1 mouse_genomes_project 1 4610252 4613915 + MGP_NODShiLtJ_P0018621 St18 protein_coding protein_coding MGP_NODShiLtJ_T0098540.1 MGP_NODShiLtJ_G0036934.1 mouse_genomes_project 1 83648748 83648852 + Gm25524 snRNA snRNA MGP_NODShiLtJ_T0000582.1 MGP_NODShiLtJ_G0000518.1 mouse_genomes_project 1 141434537 141438573 - TEC TEC MGP_NODShiLtJ_T0020222.1 MGP_NODShiLtJ_G0015994.1 mouse_genomes_project 1 81411709 81468596 - MGP_NODShiLtJ_P0020222 Mreg protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000377.1 MGP_NODShiLtJ_G0000315.1 mouse_genomes_project 1 12197990 12200240 - TEC TEC MGP_NODShiLtJ_T0022870.1 MGP_NODShiLtJ_G0016536.1 mouse_genomes_project 1 187583730 187609193 - MGP_NODShiLtJ_P0022870 Fmo2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022871.1 MGP_NODShiLtJ_G0016536.1 mouse_genomes_project 1 187583730 187609321 - MGP_NODShiLtJ_P0022871 Fmo2 protein_coding protein_coding MGP_NODShiLtJ_T0022872.1 MGP_NODShiLtJ_G0016536.1 mouse_genomes_project 1 187583735 187597126 - Fmo2 protein_coding retained_intron MGP_NODShiLtJ_T0022873.1 MGP_NODShiLtJ_G0016536.1 mouse_genomes_project 1 187585849 187609274 - MGP_NODShiLtJ_P0022873 Fmo2 protein_coding protein_coding MGP_NODShiLtJ_T0022874.1 MGP_NODShiLtJ_G0016536.1 mouse_genomes_project 1 187587452 187590151 - Fmo2 protein_coding processed_transcript MGP_NODShiLtJ_T0022875.1 MGP_NODShiLtJ_G0016536.1 mouse_genomes_project 1 187598178 187609093 - MGP_NODShiLtJ_P0022875 Fmo2 protein_coding protein_coding MGP_NODShiLtJ_T0022876.1 MGP_NODShiLtJ_G0016536.1 mouse_genomes_project 1 187598688 187609335 - Fmo2 protein_coding retained_intron MGP_NODShiLtJ_T0022877.1 MGP_NODShiLtJ_G0016536.1 mouse_genomes_project 1 187608289 187609329 - Fmo2 protein_coding retained_intron MGP_NODShiLtJ_T0005620.1 MGP_NODShiLtJ_G0004726.1 mouse_genomes_project 1 39138028 39139323 + 1110002O04Rik lincRNA lincRNA MGP_NODShiLtJ_T0000542.1 MGP_NODShiLtJ_G0000478.1 mouse_genomes_project 1 97695557 97698191 + TEC TEC MGP_NODShiLtJ_T0005929.1 MGP_NODShiLtJ_G0004963.1 mouse_genomes_project 1 195488775 195489900 + Gm37748 lincRNA lincRNA MGP_NODShiLtJ_T0023122.1 MGP_NODShiLtJ_G0016598.1 mouse_genomes_project 1 195629312 195637421 - MGP_NODShiLtJ_P0023122 Gm7694 protein_coding protein_coding MGP_NODShiLtJ_T0012081.1 MGP_NODShiLtJ_G0010189.1 mouse_genomes_project 1 134787268 134788544 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019411.1 MGP_NODShiLtJ_G0015847.1 mouse_genomes_project 1 47750061 47762031 + MGP_NODShiLtJ_P0019411 1500015O10Rik protein_coding protein_coding MGP_NODShiLtJ_T0005809.1 MGP_NODShiLtJ_G0004868.1 mouse_genomes_project 1 130692334 130770824 - 9330185C12Rik lincRNA lincRNA MGP_NODShiLtJ_T0000600.1 MGP_NODShiLtJ_G0000536.1 mouse_genomes_project 1 146743906 146746645 + TEC TEC MGP_NODShiLtJ_T0011986.1 MGP_NODShiLtJ_G0010094.1 mouse_genomes_project 1 85097789 85098555 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101460.1 MGP_NODShiLtJ_G0039630.1 mouse_genomes_project 1 17379531 17399453 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005815.1 MGP_NODShiLtJ_G0004873.1 mouse_genomes_project 1 137060391 137067077 - 3830432H09Rik lincRNA lincRNA MGP_NODShiLtJ_T0005816.1 MGP_NODShiLtJ_G0004873.1 mouse_genomes_project 1 137061204 137066157 - 3830432H09Rik lincRNA lincRNA MGP_NODShiLtJ_T0000453.1 MGP_NODShiLtJ_G0000389.1 mouse_genomes_project 1 48684502 48690180 + TEC TEC MGP_NODShiLtJ_T0005974.1 MGP_NODShiLtJ_G0004997.1 mouse_genomes_project 1 212490411 212495972 - 4930532G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0012178.1 MGP_NODShiLtJ_G0010286.1 mouse_genomes_project 1 181695716 181696238 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098476.1 MGP_NODShiLtJ_G0036874.1 mouse_genomes_project 1 119852648 119876443 - sense_overlapping sense_overlapping MGP_NODShiLtJ_T0099808.1 MGP_NODShiLtJ_G0038202.1 mouse_genomes_project 1 185118178 185118310 + Gm23528 snoRNA snoRNA MGP_NODShiLtJ_T0018856.1 MGP_NODShiLtJ_G0015733.1 mouse_genomes_project 1 18809552 18872964 + MGP_NODShiLtJ_P0018856 Tfap2d protein_coding protein_coding MGP_NODShiLtJ_T0018857.1 MGP_NODShiLtJ_G0015733.1 mouse_genomes_project 1 18813717 18855393 + Tfap2d protein_coding processed_transcript MGP_NODShiLtJ_T0020497.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84667878 84677130 + MGP_NODShiLtJ_P0020497 Dnajb2 protein_coding protein_coding MGP_NODShiLtJ_T0020498.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84667933 84676246 + MGP_NODShiLtJ_P0020498 Dnajb2 protein_coding protein_coding MGP_NODShiLtJ_T0020499.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84667933 84676246 + MGP_NODShiLtJ_P0020499 Dnajb2 protein_coding protein_coding MGP_NODShiLtJ_T0020500.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84667937 84677134 + MGP_NODShiLtJ_P0020500 Dnajb2 protein_coding protein_coding MGP_NODShiLtJ_T0020501.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84667955 84677132 + MGP_NODShiLtJ_P0020501 Dnajb2 protein_coding protein_coding MGP_NODShiLtJ_T0020502.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84667981 84676497 + MGP_NODShiLtJ_P0020502 Dnajb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020503.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84668024 84677132 + MGP_NODShiLtJ_P0020503 Dnajb2 protein_coding protein_coding MGP_NODShiLtJ_T0020504.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84668082 84670801 + MGP_NODShiLtJ_P0020504 Dnajb2 protein_coding protein_coding MGP_NODShiLtJ_T0020505.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84668240 84669150 + Dnajb2 protein_coding retained_intron MGP_NODShiLtJ_T0020506.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84668543 84668993 + Dnajb2 protein_coding retained_intron MGP_NODShiLtJ_T0020507.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84670391 84672356 + Dnajb2 protein_coding retained_intron MGP_NODShiLtJ_T0020508.1 MGP_NODShiLtJ_G0016047.1 mouse_genomes_project 1 84672843 84676369 + MGP_NODShiLtJ_P0020508 Dnajb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020405.1 MGP_NODShiLtJ_G0016035.1 mouse_genomes_project 1 84457100 84537424 - MGP_NODShiLtJ_P0020405 Nhej1 protein_coding protein_coding MGP_NODShiLtJ_T0020406.1 MGP_NODShiLtJ_G0016035.1 mouse_genomes_project 1 84457655 84552722 - MGP_NODShiLtJ_P0020406 Nhej1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020407.1 MGP_NODShiLtJ_G0016035.1 mouse_genomes_project 1 84552591 84552656 - Nhej1 protein_coding processed_transcript MGP_NODShiLtJ_T0098581.1 MGP_NODShiLtJ_G0036975.1 mouse_genomes_project 1 196426273 196426437 + Gm26110 snRNA snRNA MGP_NODShiLtJ_T0002795.1 MGP_NODShiLtJ_G0002640.1 mouse_genomes_project 1 92702164 92705005 - antisense antisense MGP_NODShiLtJ_T0099761.1 MGP_NODShiLtJ_G0038155.1 mouse_genomes_project 1 66875125 66875212 + Snord70 snoRNA snoRNA MGP_NODShiLtJ_T0021484.1 MGP_NODShiLtJ_G0016262.1 mouse_genomes_project 1 135784433 135796376 + MGP_NODShiLtJ_P0021484 Nifk protein_coding protein_coding MGP_NODShiLtJ_T0021485.1 MGP_NODShiLtJ_G0016262.1 mouse_genomes_project 1 135784448 135795495 + MGP_NODShiLtJ_P0021485 Nifk protein_coding protein_coding MGP_NODShiLtJ_T0021486.1 MGP_NODShiLtJ_G0016262.1 mouse_genomes_project 1 135784747 135791934 + MGP_NODShiLtJ_P0021486 Nifk protein_coding protein_coding MGP_NODShiLtJ_T0020888.1 MGP_NODShiLtJ_G0016124.1 mouse_genomes_project 1 97915717 97918935 - MGP_NODShiLtJ_P0020888 Alppl2 protein_coding protein_coding MGP_NODShiLtJ_T0020889.1 MGP_NODShiLtJ_G0016124.1 mouse_genomes_project 1 97915718 97918952 - MGP_NODShiLtJ_P0020889 Alppl2 protein_coding protein_coding MGP_NODShiLtJ_T0020890.1 MGP_NODShiLtJ_G0016124.1 mouse_genomes_project 1 97917803 97918829 - Alppl2 protein_coding retained_intron MGP_NODShiLtJ_T0005957.1 MGP_NODShiLtJ_G0004986.1 mouse_genomes_project 1 210529018 210529552 + Gm33973 lincRNA lincRNA MGP_NODShiLtJ_T0000435.1 MGP_NODShiLtJ_G0000371.1 mouse_genomes_project 1 39776059 39778218 + TEC TEC MGP_NODShiLtJ_T0012214.1 MGP_NODShiLtJ_G0010322.1 mouse_genomes_project 1 197218130 197218658 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020806.1 MGP_NODShiLtJ_G0016105.1 mouse_genomes_project 1 96422336 96483752 + MGP_NODShiLtJ_P0020806 Cab39 protein_coding protein_coding MGP_NODShiLtJ_T0020807.1 MGP_NODShiLtJ_G0016105.1 mouse_genomes_project 1 96422436 96449016 + MGP_NODShiLtJ_P0020807 Cab39 protein_coding protein_coding MGP_NODShiLtJ_T0020808.1 MGP_NODShiLtJ_G0016105.1 mouse_genomes_project 1 96423363 96469447 + MGP_NODShiLtJ_P0020808 Cab39 protein_coding protein_coding MGP_NODShiLtJ_T0020809.1 MGP_NODShiLtJ_G0016105.1 mouse_genomes_project 1 96423406 96482541 + MGP_NODShiLtJ_P0020809 Cab39 protein_coding protein_coding MGP_NODShiLtJ_T0020810.1 MGP_NODShiLtJ_G0016105.1 mouse_genomes_project 1 96475208 96478199 + Cab39 protein_coding retained_intron MGP_NODShiLtJ_T0000788.1 MGP_NODShiLtJ_G0000719.1 mouse_genomes_project 1 222906836 222909543 + TEC TEC MGP_NODShiLtJ_T0021818.1 MGP_NODShiLtJ_G0016333.1 mouse_genomes_project 1 150898590 150905290 + MGP_NODShiLtJ_P0021818 Rab29 protein_coding protein_coding MGP_NODShiLtJ_T0021819.1 MGP_NODShiLtJ_G0016333.1 mouse_genomes_project 1 150898606 150905438 + MGP_NODShiLtJ_P0021819 Rab29 protein_coding protein_coding MGP_NODShiLtJ_T0021820.1 MGP_NODShiLtJ_G0016333.1 mouse_genomes_project 1 150898877 150905053 + MGP_NODShiLtJ_P0021820 Rab29 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021821.1 MGP_NODShiLtJ_G0016333.1 mouse_genomes_project 1 150899019 150903567 + Rab29 protein_coding retained_intron MGP_NODShiLtJ_T0012021.1 MGP_NODShiLtJ_G0010129.1 mouse_genomes_project 1 102723905 102725244 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022019.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153744540 153746885 + Cyb5r1 protein_coding processed_transcript MGP_NODShiLtJ_T0022020.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153744675 153750633 + MGP_NODShiLtJ_P0022020 Cyb5r1 protein_coding protein_coding MGP_NODShiLtJ_T0022021.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153744675 153750629 + MGP_NODShiLtJ_P0022021 Cyb5r1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022022.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153744889 153746497 + Cyb5r1 protein_coding processed_transcript MGP_NODShiLtJ_T0022023.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153744897 153746489 + Cyb5r1 protein_coding processed_transcript MGP_NODShiLtJ_T0022024.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153744898 153748560 + MGP_NODShiLtJ_P0022024 Cyb5r1 protein_coding protein_coding MGP_NODShiLtJ_T0022025.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153744914 153747761 + Cyb5r1 protein_coding retained_intron MGP_NODShiLtJ_T0022026.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153744922 153748894 + Cyb5r1 protein_coding retained_intron MGP_NODShiLtJ_T0022027.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153745207 153749864 + MGP_NODShiLtJ_P0022027 Cyb5r1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022028.1 MGP_NODShiLtJ_G0016378.1 mouse_genomes_project 1 153745207 153746562 + MGP_NODShiLtJ_P0022028 Cyb5r1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000650.1 MGP_NODShiLtJ_G0000584.1 mouse_genomes_project 1 161815759 161816248 + TEC TEC MGP_NODShiLtJ_T0023943.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216637681 216797143 - MGP_NODShiLtJ_P0023943 Kcnk2 protein_coding protein_coding MGP_NODShiLtJ_T0023944.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216637688 216796783 - MGP_NODShiLtJ_P0023944 Kcnk2 protein_coding protein_coding MGP_NODShiLtJ_T0023945.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216637688 216851774 - MGP_NODShiLtJ_P0023945 Kcnk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023946.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216639495 216851719 - MGP_NODShiLtJ_P0023946 Kcnk2 protein_coding protein_coding MGP_NODShiLtJ_T0023947.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216639504 216851714 - MGP_NODShiLtJ_P0023947 Kcnk2 protein_coding protein_coding MGP_NODShiLtJ_T0023948.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216639541 216796306 - MGP_NODShiLtJ_P0023948 Kcnk2 protein_coding protein_coding MGP_NODShiLtJ_T0023949.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216639541 216796658 - MGP_NODShiLtJ_P0023949 Kcnk2 protein_coding protein_coding MGP_NODShiLtJ_T0023950.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216639776 216645895 - Kcnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0023951.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216639813 216680358 - Kcnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0023952.1 MGP_NODShiLtJ_G0016796.1 mouse_genomes_project 1 216791466 216799930 - Kcnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0021807.1 MGP_NODShiLtJ_G0016330.1 mouse_genomes_project 1 150770053 150797542 + MGP_NODShiLtJ_P0021807 Slc26a9 protein_coding protein_coding MGP_NODShiLtJ_T0021808.1 MGP_NODShiLtJ_G0016330.1 mouse_genomes_project 1 150770069 150790065 + MGP_NODShiLtJ_P0021808 Slc26a9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021809.1 MGP_NODShiLtJ_G0016330.1 mouse_genomes_project 1 150776412 150777117 + Slc26a9 protein_coding retained_intron MGP_NODShiLtJ_T0021810.1 MGP_NODShiLtJ_G0016330.1 mouse_genomes_project 1 150776520 150780009 + MGP_NODShiLtJ_P0021810 Slc26a9 protein_coding protein_coding MGP_NODShiLtJ_T0005928.1 MGP_NODShiLtJ_G0004962.1 mouse_genomes_project 1 194533248 194554613 - Gm37839 lincRNA lincRNA MGP_NODShiLtJ_T0000654.1 MGP_NODShiLtJ_G0000588.1 mouse_genomes_project 1 168467750 168472266 - TEC TEC MGP_NODShiLtJ_T0019504.1 MGP_NODShiLtJ_G0015865.1 mouse_genomes_project 1 51604506 51653118 - MGP_NODShiLtJ_P0019504 Slc39a10 protein_coding protein_coding MGP_NODShiLtJ_T0019505.1 MGP_NODShiLtJ_G0015865.1 mouse_genomes_project 1 51615649 51633986 - Slc39a10 protein_coding retained_intron MGP_NODShiLtJ_T0019506.1 MGP_NODShiLtJ_G0015865.1 mouse_genomes_project 1 51633726 51712240 - MGP_NODShiLtJ_P0019506 Slc39a10 protein_coding protein_coding MGP_NODShiLtJ_T0019507.1 MGP_NODShiLtJ_G0015865.1 mouse_genomes_project 1 51633824 51705045 - MGP_NODShiLtJ_P0019507 Slc39a10 protein_coding protein_coding MGP_NODShiLtJ_T0002960.1 MGP_NODShiLtJ_G0002769.1 mouse_genomes_project 1 222843915 222867831 - Gm16897 antisense antisense MGP_NODShiLtJ_T0101018.1 MGP_NODShiLtJ_G0039401.1 mouse_genomes_project 1 198032846 198050003 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101019.1 MGP_NODShiLtJ_G0039401.1 mouse_genomes_project 1 198049067 198049921 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0023993.1 MGP_NODShiLtJ_G0016804.1 mouse_genomes_project 1 218606827 218612680 - Mfsd7b protein_coding retained_intron MGP_NODShiLtJ_T0023994.1 MGP_NODShiLtJ_G0016804.1 mouse_genomes_project 1 218606827 218627840 - MGP_NODShiLtJ_P0023994 Mfsd7b protein_coding protein_coding MGP_NODShiLtJ_T0023995.1 MGP_NODShiLtJ_G0016804.1 mouse_genomes_project 1 218606829 218627649 - MGP_NODShiLtJ_P0023995 Mfsd7b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023996.1 MGP_NODShiLtJ_G0016804.1 mouse_genomes_project 1 218606830 218609435 - Mfsd7b protein_coding retained_intron MGP_NODShiLtJ_T0023997.1 MGP_NODShiLtJ_G0016804.1 mouse_genomes_project 1 218613748 218616016 - Mfsd7b protein_coding retained_intron MGP_NODShiLtJ_T0023998.1 MGP_NODShiLtJ_G0016804.1 mouse_genomes_project 1 218626590 218627806 - MGP_NODShiLtJ_P0023998 Mfsd7b protein_coding protein_coding MGP_NODShiLtJ_T0000360.1 MGP_NODShiLtJ_G0000298.1 mouse_genomes_project 1 6766632 6767795 - TEC TEC MGP_NODShiLtJ_T0019491.1 MGP_NODShiLtJ_G0015861.1 mouse_genomes_project 1 50306242 50306991 - Gm5269 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0019492.1 MGP_NODShiLtJ_G0015861.1 mouse_genomes_project 1 50306658 50306796 - MGP_NODShiLtJ_P0019492 Gm5269 protein_coding protein_coding MGP_NODShiLtJ_T0005925.1 MGP_NODShiLtJ_G0004960.1 mouse_genomes_project 1 192048476 192051070 - Gm16701 lincRNA lincRNA MGP_NODShiLtJ_T0000675.1 MGP_NODShiLtJ_G0000609.1 mouse_genomes_project 1 180380818 180383381 + TEC TEC MGP_NODShiLtJ_T0021726.1 MGP_NODShiLtJ_G0016309.1 mouse_genomes_project 1 149615011 149664050 - MGP_NODShiLtJ_P0021726 Gm29427 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005630.1 MGP_NODShiLtJ_G0004735.1 mouse_genomes_project 1 43419516 43426024 - 1700066B17Rik lincRNA lincRNA MGP_NODShiLtJ_T0005631.1 MGP_NODShiLtJ_G0004735.1 mouse_genomes_project 1 43422783 43427655 - 1700066B17Rik lincRNA lincRNA MGP_NODShiLtJ_T0005632.1 MGP_NODShiLtJ_G0004735.1 mouse_genomes_project 1 43422788 43427659 - 1700066B17Rik lincRNA lincRNA MGP_NODShiLtJ_T0002742.1 MGP_NODShiLtJ_G0002602.1 mouse_genomes_project 1 42385325 42388822 + Gm37707 antisense antisense MGP_NODShiLtJ_T0000426.1 MGP_NODShiLtJ_G0000362.1 mouse_genomes_project 1 36705631 36707932 - TEC TEC MGP_NODShiLtJ_T0021727.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149636541 149661827 - MGP_NODShiLtJ_P0021727 protein_coding protein_coding MGP_NODShiLtJ_T0021728.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149636548 149639605 - protein_coding retained_intron MGP_NODShiLtJ_T0021729.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149637637 149678523 - MGP_NODShiLtJ_P0021729 protein_coding protein_coding MGP_NODShiLtJ_T0021730.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149638374 149661828 - MGP_NODShiLtJ_P0021730 protein_coding protein_coding MGP_NODShiLtJ_T0021731.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149638374 149661828 - MGP_NODShiLtJ_P0021731 protein_coding protein_coding MGP_NODShiLtJ_T0021732.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149644946 149661827 - MGP_NODShiLtJ_P0021732 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021733.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149644946 149661827 - MGP_NODShiLtJ_P0021733 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021734.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149644946 149661827 - MGP_NODShiLtJ_P0021734 protein_coding protein_coding MGP_NODShiLtJ_T0021735.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149645134 149664064 - MGP_NODShiLtJ_P0021735 protein_coding protein_coding MGP_NODShiLtJ_T0021736.1 MGP_NODShiLtJ_G0016310.1 mouse_genomes_project 1 149654829 149665489 - MGP_NODShiLtJ_P0021736 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011782.1 MGP_NODShiLtJ_G0009890.1 mouse_genomes_project 1 14823089 14823189 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023332.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197639733 197679899 + MGP_NODShiLtJ_P0023332 Copa protein_coding protein_coding MGP_NODShiLtJ_T0023333.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197639847 197651755 + Copa protein_coding retained_intron MGP_NODShiLtJ_T0023334.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197640009 197668535 + MGP_NODShiLtJ_P0023334 Copa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023335.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197640035 197662444 + Copa protein_coding retained_intron MGP_NODShiLtJ_T0023336.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197640036 197679904 + MGP_NODShiLtJ_P0023336 Copa protein_coding protein_coding MGP_NODShiLtJ_T0023337.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197653444 197659467 + Copa protein_coding processed_transcript MGP_NODShiLtJ_T0023338.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197657938 197663975 + MGP_NODShiLtJ_P0023338 Copa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023339.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197669775 197673154 + Copa protein_coding retained_intron MGP_NODShiLtJ_T0023340.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197671922 197679902 + Copa protein_coding retained_intron MGP_NODShiLtJ_T0023341.1 MGP_NODShiLtJ_G0016646.1 mouse_genomes_project 1 197675708 197676947 + Copa protein_coding retained_intron MGP_NODShiLtJ_T0002875.1 MGP_NODShiLtJ_G0002703.1 mouse_genomes_project 1 182718189 182792722 - Gm37679 antisense antisense MGP_NODShiLtJ_T0022006.1 MGP_NODShiLtJ_G0016374.1 mouse_genomes_project 1 153622226 153624786 + MGP_NODShiLtJ_P0022006 Myog protein_coding protein_coding MGP_NODShiLtJ_T0012126.1 MGP_NODShiLtJ_G0010234.1 mouse_genomes_project 1 156046994 156047276 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009455.1 MGP_NODShiLtJ_G0007588.1 mouse_genomes_project 1 186875851 186875961 + Mir199a-2 miRNA miRNA MGP_NODShiLtJ_T0099767.1 MGP_NODShiLtJ_G0038161.1 mouse_genomes_project 1 70762651 70762783 + Snora41 snoRNA snoRNA MGP_NODShiLtJ_T0019251.1 MGP_NODShiLtJ_G0015811.1 mouse_genomes_project 1 41349676 41360115 - MGP_NODShiLtJ_P0019251 Lyg2 protein_coding protein_coding MGP_NODShiLtJ_T0002767.1 MGP_NODShiLtJ_G0002622.1 mouse_genomes_project 1 66689696 66707655 - Gm28411 antisense antisense MGP_NODShiLtJ_T0002769.1 MGP_NODShiLtJ_G0002622.1 mouse_genomes_project 1 66701035 66708388 - Gm28411 antisense antisense MGP_NODShiLtJ_T0005697.1 MGP_NODShiLtJ_G0004778.1 mouse_genomes_project 1 70680131 70689846 + Gm20342 lincRNA lincRNA MGP_NODShiLtJ_T0019465.1 MGP_NODShiLtJ_G0015856.1 mouse_genomes_project 1 48272307 48302846 - MGP_NODShiLtJ_P0019465 Mettl21e protein_coding protein_coding MGP_NODShiLtJ_T0019466.1 MGP_NODShiLtJ_G0015856.1 mouse_genomes_project 1 48274698 48302798 - Mettl21e protein_coding retained_intron MGP_NODShiLtJ_T0020949.1 MGP_NODShiLtJ_G0016137.1 mouse_genomes_project 1 98386366 98487882 + MGP_NODShiLtJ_P0020949 Neu2 protein_coding protein_coding MGP_NODShiLtJ_T0020950.1 MGP_NODShiLtJ_G0016137.1 mouse_genomes_project 1 98456461 98489050 + MGP_NODShiLtJ_P0020950 Neu2 protein_coding protein_coding MGP_NODShiLtJ_T0020951.1 MGP_NODShiLtJ_G0016137.1 mouse_genomes_project 1 98456461 98489033 + MGP_NODShiLtJ_P0020951 Neu2 protein_coding protein_coding MGP_NODShiLtJ_T0020952.1 MGP_NODShiLtJ_G0016137.1 mouse_genomes_project 1 98456480 98487777 + MGP_NODShiLtJ_P0020952 Neu2 protein_coding protein_coding MGP_NODShiLtJ_T0020953.1 MGP_NODShiLtJ_G0016137.1 mouse_genomes_project 1 98468555 98489057 + MGP_NODShiLtJ_P0020953 Neu2 protein_coding protein_coding MGP_NODShiLtJ_T0020954.1 MGP_NODShiLtJ_G0016137.1 mouse_genomes_project 1 98485763 98489033 + MGP_NODShiLtJ_P0020954 Neu2 protein_coding protein_coding MGP_NODShiLtJ_T0020955.1 MGP_NODShiLtJ_G0016137.1 mouse_genomes_project 1 98485763 98489039 + MGP_NODShiLtJ_P0020955 Neu2 protein_coding protein_coding MGP_NODShiLtJ_T0019985.1 MGP_NODShiLtJ_G0015950.1 mouse_genomes_project 1 70510774 70649542 - MGP_NODShiLtJ_P0019985 Ino80d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019986.1 MGP_NODShiLtJ_G0015950.1 mouse_genomes_project 1 70613833 70664567 - MGP_NODShiLtJ_P0019986 Ino80d protein_coding protein_coding MGP_NODShiLtJ_T0019987.1 MGP_NODShiLtJ_G0015950.1 mouse_genomes_project 1 70615985 70619412 - Ino80d protein_coding retained_intron MGP_NODShiLtJ_T0019988.1 MGP_NODShiLtJ_G0015950.1 mouse_genomes_project 1 70618000 70677243 - MGP_NODShiLtJ_P0019988 Ino80d protein_coding protein_coding MGP_NODShiLtJ_T0019989.1 MGP_NODShiLtJ_G0015950.1 mouse_genomes_project 1 70618014 70677164 - MGP_NODShiLtJ_P0019989 Ino80d protein_coding protein_coding MGP_NODShiLtJ_T0000701.1 MGP_NODShiLtJ_G0000635.1 mouse_genomes_project 1 185439034 185442612 + TEC TEC MGP_NODShiLtJ_T0022101.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154834886 154885268 - MGP_NODShiLtJ_P0022101 Ipo9 protein_coding protein_coding MGP_NODShiLtJ_T0022102.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154837045 154885227 - MGP_NODShiLtJ_P0022102 Ipo9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022103.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154837045 154885260 - MGP_NODShiLtJ_P0022103 Ipo9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022104.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154837689 154842482 - MGP_NODShiLtJ_P0022104 Ipo9 protein_coding protein_coding MGP_NODShiLtJ_T0022105.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154838377 154842437 - Ipo9 protein_coding retained_intron MGP_NODShiLtJ_T0022106.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154838859 154842588 - Ipo9 protein_coding retained_intron MGP_NODShiLtJ_T0022107.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154838964 154840138 - Ipo9 protein_coding retained_intron MGP_NODShiLtJ_T0022108.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154842503 154843681 - Ipo9 protein_coding retained_intron MGP_NODShiLtJ_T0022109.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154843324 154857205 - Ipo9 protein_coding processed_transcript MGP_NODShiLtJ_T0022110.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154847982 154857296 - Ipo9 protein_coding retained_intron MGP_NODShiLtJ_T0022111.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154856183 154885202 - MGP_NODShiLtJ_P0022111 Ipo9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022112.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154859856 154860976 - Ipo9 protein_coding retained_intron MGP_NODShiLtJ_T0022113.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154860306 154873843 - Ipo9 protein_coding retained_intron MGP_NODShiLtJ_T0022114.1 MGP_NODShiLtJ_G0016396.1 mouse_genomes_project 1 154861692 154885188 - MGP_NODShiLtJ_P0022114 Ipo9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005787.1 MGP_NODShiLtJ_G0004851.1 mouse_genomes_project 1 108222797 108291304 - lincRNA lincRNA MGP_NODShiLtJ_T0005801.1 MGP_NODShiLtJ_G0004862.1 mouse_genomes_project 1 120984459 120986269 - A530053M12Rik lincRNA lincRNA MGP_NODShiLtJ_T0002895.1 MGP_NODShiLtJ_G0002718.1 mouse_genomes_project 1 191343510 191346357 - 5330438I03Rik antisense antisense MGP_NODShiLtJ_T0011739.1 MGP_NODShiLtJ_G0009847.1 mouse_genomes_project 1 2182114 2184505 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099741.1 MGP_NODShiLtJ_G0038135.1 mouse_genomes_project 1 19286875 19286940 - Gm24633 snoRNA snoRNA MGP_NODShiLtJ_T0009464.1 MGP_NODShiLtJ_G0007597.1 mouse_genomes_project 1 197174828 197174889 - Mir7683 miRNA miRNA MGP_NODShiLtJ_T0002751.1 MGP_NODShiLtJ_G0002610.1 mouse_genomes_project 1 47761413 47763348 - Gm29155 antisense antisense MGP_NODShiLtJ_T0002752.1 MGP_NODShiLtJ_G0002610.1 mouse_genomes_project 1 47763036 47763305 - Gm29155 antisense antisense MGP_NODShiLtJ_T0098566.1 MGP_NODShiLtJ_G0036960.1 mouse_genomes_project 1 156582552 156582612 - Gm23763 snRNA snRNA MGP_NODShiLtJ_T0000672.1 MGP_NODShiLtJ_G0000606.1 mouse_genomes_project 1 179884015 179885220 + TEC TEC MGP_NODShiLtJ_T0018917.1 MGP_NODShiLtJ_G0015751.1 mouse_genomes_project 1 24113289 24171092 + MGP_NODShiLtJ_P0018917 B3gat2 protein_coding protein_coding MGP_NODShiLtJ_T0018918.1 MGP_NODShiLtJ_G0015751.1 mouse_genomes_project 1 24113913 24205597 + MGP_NODShiLtJ_P0018918 B3gat2 protein_coding protein_coding MGP_NODShiLtJ_T0101519.1 MGP_NODShiLtJ_G0039689.1 mouse_genomes_project 1 207847950 207848082 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000529.1 MGP_NODShiLtJ_G0000465.1 mouse_genomes_project 1 93822395 93824066 - TEC TEC MGP_NODShiLtJ_T0023194.1 MGP_NODShiLtJ_G0016616.1 mouse_genomes_project 1 196688165 196689486 + MGP_NODShiLtJ_P0023194 Apoa2 protein_coding protein_coding MGP_NODShiLtJ_T0023195.1 MGP_NODShiLtJ_G0016616.1 mouse_genomes_project 1 196688193 196689485 + MGP_NODShiLtJ_P0023195 Apoa2 protein_coding protein_coding MGP_NODShiLtJ_T0023196.1 MGP_NODShiLtJ_G0016616.1 mouse_genomes_project 1 196688195 196689480 + MGP_NODShiLtJ_P0023196 Apoa2 protein_coding protein_coding MGP_NODShiLtJ_T0023197.1 MGP_NODShiLtJ_G0016616.1 mouse_genomes_project 1 196688202 196689444 + MGP_NODShiLtJ_P0023197 Apoa2 protein_coding protein_coding MGP_NODShiLtJ_T0005678.1 MGP_NODShiLtJ_G0004763.1 mouse_genomes_project 1 64112066 64127505 - BC055402 lincRNA lincRNA MGP_NODShiLtJ_T0011917.1 MGP_NODShiLtJ_G0010025.1 mouse_genomes_project 1 61763721 61764527 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101496.1 MGP_NODShiLtJ_G0039666.1 mouse_genomes_project 1 121990616 122006188 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0021763.1 MGP_NODShiLtJ_G0016321.1 mouse_genomes_project 1 150111201 150122749 - MGP_NODShiLtJ_P0021763 Dyrk3 protein_coding protein_coding MGP_NODShiLtJ_T0021764.1 MGP_NODShiLtJ_G0016321.1 mouse_genomes_project 1 150113621 150122654 - MGP_NODShiLtJ_P0021764 Dyrk3 protein_coding protein_coding MGP_NODShiLtJ_T0005908.1 MGP_NODShiLtJ_G0004946.1 mouse_genomes_project 1 189352591 189354139 + Gm32391 lincRNA lincRNA MGP_NODShiLtJ_T0011894.1 MGP_NODShiLtJ_G0010002.1 mouse_genomes_project 1 54004903 54006391 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000738.1 MGP_NODShiLtJ_G0000672.1 mouse_genomes_project 1 204015439 204016670 - TEC TEC MGP_NODShiLtJ_T0020919.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98178559 98326590 + MGP_NODShiLtJ_P0020919 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020920.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98178585 98324419 + MGP_NODShiLtJ_P0020920 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020921.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98178586 98215217 + Gigyf2 protein_coding processed_transcript MGP_NODShiLtJ_T0020922.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98178589 98288721 + MGP_NODShiLtJ_P0020922 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020923.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98178602 98180564 + Gigyf2 protein_coding retained_intron MGP_NODShiLtJ_T0020924.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98178604 98252746 + Gigyf2 protein_coding processed_transcript MGP_NODShiLtJ_T0020925.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98178622 98297279 + MGP_NODShiLtJ_P0020925 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020926.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98211015 98324419 + MGP_NODShiLtJ_P0020926 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020927.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98211015 98324419 + MGP_NODShiLtJ_P0020927 Gigyf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020928.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98223284 98239688 + Gigyf2 protein_coding retained_intron MGP_NODShiLtJ_T0020929.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98223643 98225138 + Gigyf2 protein_coding retained_intron MGP_NODShiLtJ_T0020930.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98248130 98269169 + Gigyf2 protein_coding processed_transcript MGP_NODShiLtJ_T0020931.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98248151 98268900 + MGP_NODShiLtJ_P0020931 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020934.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98265504 98317294 + MGP_NODShiLtJ_P0020934 Gigyf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020935.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98265563 98269558 + MGP_NODShiLtJ_P0020935 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020936.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98266772 98269468 + MGP_NODShiLtJ_P0020936 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020937.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98266804 98272559 + MGP_NODShiLtJ_P0020937 Gigyf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020938.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98266820 98269223 + MGP_NODShiLtJ_P0020938 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020939.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98269235 98282773 + MGP_NODShiLtJ_P0020939 Gigyf2 protein_coding protein_coding MGP_NODShiLtJ_T0020940.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98282641 98285400 + Gigyf2 protein_coding retained_intron MGP_NODShiLtJ_T0020941.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98296599 98326590 + Gigyf2 protein_coding processed_transcript MGP_NODShiLtJ_T0020942.1 MGP_NODShiLtJ_G0016133.1 mouse_genomes_project 1 98318601 98324482 + Gigyf2 protein_coding retained_intron MGP_NODShiLtJ_T0002731.1 MGP_NODShiLtJ_G0002594.1 mouse_genomes_project 1 40496257 40497249 - Gm37020 antisense antisense MGP_NODShiLtJ_T0012048.1 MGP_NODShiLtJ_G0010156.1 mouse_genomes_project 1 119044425 119045234 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002806.1 MGP_NODShiLtJ_G0002651.1 mouse_genomes_project 1 104055220 104055596 - 1700054K02Rik antisense antisense MGP_NODShiLtJ_T0005676.1 MGP_NODShiLtJ_G0004761.1 mouse_genomes_project 1 63387598 63389651 + Gm28240 lincRNA lincRNA MGP_NODShiLtJ_T0012005.1 MGP_NODShiLtJ_G0010113.1 mouse_genomes_project 1 93530285 93531106 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019059.1 MGP_NODShiLtJ_G0015779.1 mouse_genomes_project 1 37708100 37720343 + MGP_NODShiLtJ_P0019059 Amer3 protein_coding protein_coding MGP_NODShiLtJ_T0020943.1 MGP_NODShiLtJ_G0016135.1 mouse_genomes_project 1 98344573 98349785 + MGP_NODShiLtJ_P0020943 3110079O15Rik protein_coding protein_coding MGP_NODShiLtJ_T0020944.1 MGP_NODShiLtJ_G0016135.1 mouse_genomes_project 1 98346841 98349761 + 3110079O15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0005922.1 MGP_NODShiLtJ_G0004957.1 mouse_genomes_project 1 191124373 191124534 + Gm37923 lincRNA lincRNA MGP_NODShiLtJ_T0012143.1 MGP_NODShiLtJ_G0010251.1 mouse_genomes_project 1 165483610 165485281 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000561.1 MGP_NODShiLtJ_G0000497.1 mouse_genomes_project 1 110324141 110325326 - TEC TEC MGP_NODShiLtJ_T0098576.1 MGP_NODShiLtJ_G0036970.1 mouse_genomes_project 1 190832712 190832819 - Gm23402 snRNA snRNA MGP_NODShiLtJ_T0005851.1 MGP_NODShiLtJ_G0004903.1 mouse_genomes_project 1 155755859 155759047 - Gm37552 lincRNA lincRNA MGP_NODShiLtJ_T0020786.1 MGP_NODShiLtJ_G0016097.1 mouse_genomes_project 1 95685820 95686966 + protein_coding processed_transcript MGP_NODShiLtJ_T0020092.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72973844 72993318 + Pikfyve protein_coding retained_intron MGP_NODShiLtJ_T0020093.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72973850 73036410 + MGP_NODShiLtJ_P0020093 Pikfyve protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020094.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72973854 73015239 + Pikfyve protein_coding retained_intron MGP_NODShiLtJ_T0020095.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72973855 72979710 + Pikfyve protein_coding retained_intron MGP_NODShiLtJ_T0020096.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72973857 72993786 + Pikfyve protein_coding processed_transcript MGP_NODShiLtJ_T0020097.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72973865 73022737 + Pikfyve protein_coding retained_intron MGP_NODShiLtJ_T0020098.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72973874 72979414 + MGP_NODShiLtJ_P0020098 Pikfyve protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020099.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72973880 73088671 + MGP_NODShiLtJ_P0020099 Pikfyve protein_coding protein_coding MGP_NODShiLtJ_T0020100.1 MGP_NODShiLtJ_G0015975.1 mouse_genomes_project 1 72983986 73003863 + Pikfyve protein_coding retained_intron MGP_NODShiLtJ_T0000652.1 MGP_NODShiLtJ_G0000586.1 mouse_genomes_project 1 162077678 162078950 + TEC TEC MGP_NODShiLtJ_T0012173.1 MGP_NODShiLtJ_G0010281.1 mouse_genomes_project 1 179024314 179024896 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000380.1 MGP_NODShiLtJ_G0000318.1 mouse_genomes_project 1 13023809 13027414 - TEC TEC MGP_NODShiLtJ_T0000551.1 MGP_NODShiLtJ_G0000487.1 mouse_genomes_project 1 101871167 101873966 + TEC TEC MGP_NODShiLtJ_T0023848.1 MGP_NODShiLtJ_G0016775.1 mouse_genomes_project 1 211028652 211058482 + MGP_NODShiLtJ_P0023848 Dusp10 protein_coding protein_coding MGP_NODShiLtJ_T0023851.1 MGP_NODShiLtJ_G0016775.1 mouse_genomes_project 1 211054007 211105882 + MGP_NODShiLtJ_P0023851 Dusp10 protein_coding protein_coding MGP_NODShiLtJ_T0020247.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83324791 83556099 - MGP_NODShiLtJ_P0020247 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020248.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83324792 83520272 - MGP_NODShiLtJ_P0020248 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020249.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83324792 83556101 - MGP_NODShiLtJ_P0020249 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020250.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83328465 83343058 - MGP_NODShiLtJ_P0020250 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020251.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83328648 83414896 - MGP_NODShiLtJ_P0020251 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020252.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83328672 83414896 - MGP_NODShiLtJ_P0020252 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020253.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83339689 83355593 - MGP_NODShiLtJ_P0020253 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020254.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83339976 83342762 - Tns1 protein_coding retained_intron MGP_NODShiLtJ_T0020255.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83339976 83345356 - Tns1 protein_coding processed_transcript MGP_NODShiLtJ_T0020256.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83340189 83345050 - Tns1 protein_coding processed_transcript MGP_NODShiLtJ_T0020257.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83367987 83379087 - MGP_NODShiLtJ_P0020257 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020258.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83398254 83404636 - Tns1 protein_coding retained_intron MGP_NODShiLtJ_T0020259.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83407273 83419921 - Tns1 protein_coding retained_intron MGP_NODShiLtJ_T0020260.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83407925 83439726 - Tns1 protein_coding processed_transcript MGP_NODShiLtJ_T0020261.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83409645 83419921 - Tns1 protein_coding processed_transcript MGP_NODShiLtJ_T0020262.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83409750 83423014 - MGP_NODShiLtJ_P0020262 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020263.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83412722 83461725 - MGP_NODShiLtJ_P0020263 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020264.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83414325 83417222 - Tns1 protein_coding retained_intron MGP_NODShiLtJ_T0020265.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83414811 83525753 - MGP_NODShiLtJ_P0020265 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020266.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83416581 83525796 - MGP_NODShiLtJ_P0020266 Tns1 protein_coding protein_coding MGP_NODShiLtJ_T0020267.1 MGP_NODShiLtJ_G0016005.1 mouse_genomes_project 1 83423746 83461749 - Tns1 protein_coding processed_transcript MGP_NODShiLtJ_T0023265.1 MGP_NODShiLtJ_G0016627.1 mouse_genomes_project 1 196832134 196834483 - MGP_NODShiLtJ_P0023265 Klhdc9 protein_coding protein_coding MGP_NODShiLtJ_T0012192.1 MGP_NODShiLtJ_G0010300.1 mouse_genomes_project 1 188888939 188889328 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000459.1 MGP_NODShiLtJ_G0000395.1 mouse_genomes_project 1 58859161 58861033 - TEC TEC MGP_NODShiLtJ_T0005830.1 MGP_NODShiLtJ_G0004883.1 mouse_genomes_project 1 139058925 139063662 - 2210011K15Rik lincRNA lincRNA MGP_NODShiLtJ_T0012004.1 MGP_NODShiLtJ_G0010112.1 mouse_genomes_project 1 93425664 93426036 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021029.1 MGP_NODShiLtJ_G0016155.1 mouse_genomes_project 1 99641170 99660570 + MGP_NODShiLtJ_P0021029 Spp2 protein_coding protein_coding MGP_NODShiLtJ_T0021030.1 MGP_NODShiLtJ_G0016155.1 mouse_genomes_project 1 99641426 99660566 + MGP_NODShiLtJ_P0021030 Spp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000574.1 MGP_NODShiLtJ_G0000510.1 mouse_genomes_project 1 137167507 137168377 - TEC TEC MGP_NODShiLtJ_T0022585.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179958135 180005456 + MGP_NODShiLtJ_P0022585 Tor1aip2 protein_coding protein_coding MGP_NODShiLtJ_T0022586.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179958458 179976371 + MGP_NODShiLtJ_P0022586 Tor1aip2 protein_coding protein_coding MGP_NODShiLtJ_T0022587.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179958504 179982356 + MGP_NODShiLtJ_P0022587 Tor1aip2 protein_coding protein_coding MGP_NODShiLtJ_T0022588.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179958865 179976578 + MGP_NODShiLtJ_P0022588 Tor1aip2 protein_coding protein_coding MGP_NODShiLtJ_T0022589.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179963609 179974511 + Tor1aip2 protein_coding processed_transcript MGP_NODShiLtJ_T0022590.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179963609 180005456 + MGP_NODShiLtJ_P0022590 Tor1aip2 protein_coding protein_coding MGP_NODShiLtJ_T0022591.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179963636 179976578 + MGP_NODShiLtJ_P0022591 Tor1aip2 protein_coding protein_coding MGP_NODShiLtJ_T0022592.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179963636 179976578 + MGP_NODShiLtJ_P0022592 Tor1aip2 protein_coding protein_coding MGP_NODShiLtJ_T0022593.1 MGP_NODShiLtJ_G0016489.1 mouse_genomes_project 1 179987245 180001448 + Tor1aip2 protein_coding retained_intron MGP_NODShiLtJ_T0002918.1 MGP_NODShiLtJ_G0002737.1 mouse_genomes_project 1 205538273 205558352 - Gm16564 antisense antisense MGP_NODShiLtJ_T0012168.1 MGP_NODShiLtJ_G0010276.1 mouse_genomes_project 1 176571004 176571707 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012090.1 MGP_NODShiLtJ_G0010198.1 mouse_genomes_project 1 137375608 137376318 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002908.1 MGP_NODShiLtJ_G0002728.1 mouse_genomes_project 1 197648111 197650874 - Gm37756 antisense antisense MGP_NODShiLtJ_T0011912.1 MGP_NODShiLtJ_G0010020.1 mouse_genomes_project 1 58972293 58972704 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005921.1 MGP_NODShiLtJ_G0004956.1 mouse_genomes_project 1 191033091 191071192 + Gm26665 lincRNA lincRNA MGP_NODShiLtJ_T0097731.1 MGP_NODShiLtJ_G0036143.1 mouse_genomes_project 1 37856133 37857082 + pseudogene pseudogene MGP_NODShiLtJ_T0000715.1 MGP_NODShiLtJ_G0000649.1 mouse_genomes_project 1 190868292 190868854 - TEC TEC MGP_NODShiLtJ_T0012183.1 MGP_NODShiLtJ_G0010291.1 mouse_genomes_project 1 183682974 183683480 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018711.1 MGP_NODShiLtJ_G0015702.1 mouse_genomes_project 1 8587232 8689646 - MGP_NODShiLtJ_P0018711 Arfgef1 protein_coding protein_coding MGP_NODShiLtJ_T0018712.1 MGP_NODShiLtJ_G0015702.1 mouse_genomes_project 1 8588351 8591363 - Arfgef1 protein_coding retained_intron MGP_NODShiLtJ_T0018713.1 MGP_NODShiLtJ_G0015702.1 mouse_genomes_project 1 8597064 8604189 - Arfgef1 protein_coding retained_intron MGP_NODShiLtJ_T0018714.1 MGP_NODShiLtJ_G0015702.1 mouse_genomes_project 1 8606082 8609744 - Arfgef1 protein_coding retained_intron MGP_NODShiLtJ_T0018715.1 MGP_NODShiLtJ_G0015702.1 mouse_genomes_project 1 8610440 8610911 - Arfgef1 protein_coding retained_intron MGP_NODShiLtJ_T0018716.1 MGP_NODShiLtJ_G0015702.1 mouse_genomes_project 1 8624424 8689646 - MGP_NODShiLtJ_P0018716 Arfgef1 protein_coding protein_coding MGP_NODShiLtJ_T0018717.1 MGP_NODShiLtJ_G0015702.1 mouse_genomes_project 1 8662491 8663653 - Arfgef1 protein_coding retained_intron MGP_NODShiLtJ_T0018718.1 MGP_NODShiLtJ_G0015702.1 mouse_genomes_project 1 8662706 8670970 - Arfgef1 protein_coding retained_intron MGP_NODShiLtJ_T0099774.1 MGP_NODShiLtJ_G0038168.1 mouse_genomes_project 1 96756295 96756417 + Gm22786 snoRNA snoRNA MGP_NODShiLtJ_T0098539.1 MGP_NODShiLtJ_G0036933.1 mouse_genomes_project 1 81534312 81534503 + Gm25939 snRNA snRNA MGP_NODShiLtJ_T0021822.1 MGP_NODShiLtJ_G0016334.1 mouse_genomes_project 1 150949070 150975202 + MGP_NODShiLtJ_P0021822 Nucks1 protein_coding protein_coding MGP_NODShiLtJ_T0021823.1 MGP_NODShiLtJ_G0016334.1 mouse_genomes_project 1 150949092 150993249 + MGP_NODShiLtJ_P0021823 Nucks1 protein_coding protein_coding MGP_NODShiLtJ_T0021824.1 MGP_NODShiLtJ_G0016334.1 mouse_genomes_project 1 150971685 150972594 + Nucks1 protein_coding retained_intron MGP_NODShiLtJ_T0009473.1 MGP_NODShiLtJ_G0007606.1 mouse_genomes_project 1 218040354 218040442 - miRNA miRNA MGP_NODShiLtJ_T0009409.1 MGP_NODShiLtJ_G0007542.1 mouse_genomes_project 1 83250104 83250203 - Mir6351 miRNA miRNA MGP_NODShiLtJ_T0018913.1 MGP_NODShiLtJ_G0015750.1 mouse_genomes_project 1 23654044 23672309 - MGP_NODShiLtJ_P0018913 Ogfrl1 protein_coding protein_coding MGP_NODShiLtJ_T0018914.1 MGP_NODShiLtJ_G0015750.1 mouse_genomes_project 1 23657332 23669905 - Ogfrl1 protein_coding retained_intron MGP_NODShiLtJ_T0018915.1 MGP_NODShiLtJ_G0015750.1 mouse_genomes_project 1 23659390 23687219 - MGP_NODShiLtJ_P0018915 Ogfrl1 protein_coding protein_coding MGP_NODShiLtJ_T0018916.1 MGP_NODShiLtJ_G0015750.1 mouse_genomes_project 1 23680935 23687450 - Ogfrl1 protein_coding processed_transcript MGP_NODShiLtJ_T0009471.1 MGP_NODShiLtJ_G0007604.1 mouse_genomes_project 1 212438340 212438407 + Mir194-1 miRNA miRNA MGP_NODShiLtJ_T0002847.1 MGP_NODShiLtJ_G0002679.1 mouse_genomes_project 1 153200102 153209777 + Gm15851 antisense antisense MGP_NODShiLtJ_T0011737.1 MGP_NODShiLtJ_G0009845.1 mouse_genomes_project 1 2104736 2105942 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005790.1 MGP_NODShiLtJ_G0004854.1 mouse_genomes_project 1 110984233 110990891 + 1810006J02Rik lincRNA lincRNA MGP_NODShiLtJ_T0005791.1 MGP_NODShiLtJ_G0004854.1 mouse_genomes_project 1 110984244 110997346 + 1810006J02Rik lincRNA lincRNA MGP_NODShiLtJ_T0009400.1 MGP_NODShiLtJ_G0007533.1 mouse_genomes_project 1 61438003 61438108 + Gm24053 miRNA miRNA MGP_NODShiLtJ_T0099819.1 MGP_NODShiLtJ_G0038213.1 mouse_genomes_project 1 185591242 185591318 + Gm25789 snoRNA snoRNA MGP_NODShiLtJ_T0022370.1 MGP_NODShiLtJ_G0016449.1 mouse_genomes_project 1 173954185 174440244 - MGP_NODShiLtJ_P0022370 Hmcn1 protein_coding protein_coding MGP_NODShiLtJ_T0022371.1 MGP_NODShiLtJ_G0016449.1 mouse_genomes_project 1 173955188 174440244 - MGP_NODShiLtJ_P0022371 Hmcn1 protein_coding protein_coding MGP_NODShiLtJ_T0022372.1 MGP_NODShiLtJ_G0016449.1 mouse_genomes_project 1 173955345 173976514 - MGP_NODShiLtJ_P0022372 Hmcn1 protein_coding protein_coding MGP_NODShiLtJ_T0022373.1 MGP_NODShiLtJ_G0016449.1 mouse_genomes_project 1 173955372 173957266 - Hmcn1 protein_coding retained_intron MGP_NODShiLtJ_T0022374.1 MGP_NODShiLtJ_G0016449.1 mouse_genomes_project 1 173970736 173973917 - Hmcn1 protein_coding processed_transcript MGP_NODShiLtJ_T0022375.1 MGP_NODShiLtJ_G0016449.1 mouse_genomes_project 1 174296882 174440628 - Hmcn1 protein_coding retained_intron MGP_NODShiLtJ_T0011808.1 MGP_NODShiLtJ_G0009916.1 mouse_genomes_project 1 23631378 23632022 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000351.1 MGP_NODShiLtJ_G0000289.1 mouse_genomes_project 1 1709131 1710615 - TEC TEC MGP_NODShiLtJ_T0005768.1 MGP_NODShiLtJ_G0004832.1 mouse_genomes_project 1 100587911 100651879 - Gm28342 lincRNA lincRNA MGP_NODShiLtJ_T0022154.1 MGP_NODShiLtJ_G0016403.1 mouse_genomes_project 1 155348787 155401284 - MGP_NODShiLtJ_P0022154 Pkp1 protein_coding protein_coding MGP_NODShiLtJ_T0022155.1 MGP_NODShiLtJ_G0016403.1 mouse_genomes_project 1 155350342 155401197 - MGP_NODShiLtJ_P0022155 Pkp1 protein_coding protein_coding MGP_NODShiLtJ_T0022156.1 MGP_NODShiLtJ_G0016403.1 mouse_genomes_project 1 155350758 155401219 - MGP_NODShiLtJ_P0022156 Pkp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022157.1 MGP_NODShiLtJ_G0016403.1 mouse_genomes_project 1 155354710 155355668 - Pkp1 protein_coding retained_intron MGP_NODShiLtJ_T0012101.1 MGP_NODShiLtJ_G0010209.1 mouse_genomes_project 1 140748452 140748829 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000368.1 MGP_NODShiLtJ_G0000306.1 mouse_genomes_project 1 9889768 9892807 - TEC TEC MGP_NODShiLtJ_T0000684.1 MGP_NODShiLtJ_G0000618.1 mouse_genomes_project 1 182600313 182603073 + TEC TEC MGP_NODShiLtJ_T0011839.1 MGP_NODShiLtJ_G0009947.1 mouse_genomes_project 1 36895599 36898006 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021517.1 MGP_NODShiLtJ_G0016264.1 mouse_genomes_project 1 136108219 136122783 + Tfcp2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0021518.1 MGP_NODShiLtJ_G0016264.1 mouse_genomes_project 1 136108220 136172604 + MGP_NODShiLtJ_P0021518 Tfcp2l1 protein_coding protein_coding MGP_NODShiLtJ_T0098535.1 MGP_NODShiLtJ_G0036929.1 mouse_genomes_project 1 79656460 79656567 + Gm23422 snRNA snRNA MGP_NODShiLtJ_T0101467.1 MGP_NODShiLtJ_G0039637.1 mouse_genomes_project 1 25061213 25061751 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0019707.1 MGP_NODShiLtJ_G0015903.1 mouse_genomes_project 1 63672593 63863405 - MGP_NODShiLtJ_P0019707 Satb2 protein_coding protein_coding MGP_NODShiLtJ_T0019708.1 MGP_NODShiLtJ_G0015903.1 mouse_genomes_project 1 63672598 63862760 - MGP_NODShiLtJ_P0019708 Satb2 protein_coding protein_coding MGP_NODShiLtJ_T0019709.1 MGP_NODShiLtJ_G0015903.1 mouse_genomes_project 1 63672600 63859720 - MGP_NODShiLtJ_P0019709 Satb2 protein_coding protein_coding MGP_NODShiLtJ_T0019710.1 MGP_NODShiLtJ_G0015903.1 mouse_genomes_project 1 63835954 63859688 - MGP_NODShiLtJ_P0019710 Satb2 protein_coding protein_coding MGP_NODShiLtJ_T0019711.1 MGP_NODShiLtJ_G0015903.1 mouse_genomes_project 1 63859587 63871175 - MGP_NODShiLtJ_P0019711 Satb2 protein_coding protein_coding MGP_NODShiLtJ_T0021529.1 MGP_NODShiLtJ_G0016267.1 mouse_genomes_project 1 136999686 137034097 - MGP_NODShiLtJ_P0021529 Ralb protein_coding protein_coding MGP_NODShiLtJ_T0021530.1 MGP_NODShiLtJ_G0016267.1 mouse_genomes_project 1 137001526 137007435 - MGP_NODShiLtJ_P0021530 Ralb protein_coding protein_coding MGP_NODShiLtJ_T0021531.1 MGP_NODShiLtJ_G0016267.1 mouse_genomes_project 1 137010488 137034097 - Ralb protein_coding retained_intron MGP_NODShiLtJ_T0011678.1 MGP_NODShiLtJ_G0009811.1 mouse_genomes_project 1 122261036 122282486 + MGP_NODShiLtJ_P0011678 polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0011679.1 MGP_NODShiLtJ_G0009811.1 mouse_genomes_project 1 122261060 122284535 + polymorphic_pseudogene processed_transcript MGP_NODShiLtJ_T0011680.1 MGP_NODShiLtJ_G0009811.1 mouse_genomes_project 1 122264404 122282336 + MGP_NODShiLtJ_P0011680 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0020067.1 MGP_NODShiLtJ_G0015966.1 mouse_genomes_project 1 72776336 72798375 - MGP_NODShiLtJ_P0020067 Akr1cl protein_coding protein_coding MGP_NODShiLtJ_T0020068.1 MGP_NODShiLtJ_G0015966.1 mouse_genomes_project 1 72776336 72798387 - MGP_NODShiLtJ_P0020068 Akr1cl protein_coding protein_coding MGP_NODShiLtJ_T0020069.1 MGP_NODShiLtJ_G0015966.1 mouse_genomes_project 1 72779205 72781279 - Akr1cl protein_coding retained_intron MGP_NODShiLtJ_T0020070.1 MGP_NODShiLtJ_G0015966.1 mouse_genomes_project 1 72780803 72798314 - MGP_NODShiLtJ_P0020070 Akr1cl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020071.1 MGP_NODShiLtJ_G0015966.1 mouse_genomes_project 1 72792588 72798360 - Akr1cl protein_coding processed_transcript MGP_NODShiLtJ_T0020072.1 MGP_NODShiLtJ_G0015966.1 mouse_genomes_project 1 72794430 72798376 - Akr1cl protein_coding retained_intron MGP_NODShiLtJ_T0024150.1 MGP_NODShiLtJ_G0016834.1 mouse_genomes_project 1 222479052 222481649 + Plxna2 protein_coding retained_intron MGP_NODShiLtJ_T0024151.1 MGP_NODShiLtJ_G0016834.1 mouse_genomes_project 1 222480606 222687854 + MGP_NODShiLtJ_P0024151 Plxna2 protein_coding protein_coding MGP_NODShiLtJ_T0024152.1 MGP_NODShiLtJ_G0016834.1 mouse_genomes_project 1 222506619 222518690 + Plxna2 protein_coding processed_transcript MGP_NODShiLtJ_T0024153.1 MGP_NODShiLtJ_G0016834.1 mouse_genomes_project 1 222632735 222655281 + MGP_NODShiLtJ_P0024153 Plxna2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024154.1 MGP_NODShiLtJ_G0016834.1 mouse_genomes_project 1 222674248 222683669 + Plxna2 protein_coding retained_intron MGP_NODShiLtJ_T0019092.1 MGP_NODShiLtJ_G0015785.1 mouse_genomes_project 1 39541204 39550048 - MGP_NODShiLtJ_P0019092 Neurl3 protein_coding protein_coding MGP_NODShiLtJ_T0019093.1 MGP_NODShiLtJ_G0015785.1 mouse_genomes_project 1 39545468 39552177 - MGP_NODShiLtJ_P0019093 Neurl3 protein_coding protein_coding MGP_NODShiLtJ_T0021825.1 MGP_NODShiLtJ_G0016335.1 mouse_genomes_project 1 151021551 151042452 + MGP_NODShiLtJ_P0021825 Slc45a3 protein_coding protein_coding MGP_NODShiLtJ_T0021826.1 MGP_NODShiLtJ_G0016335.1 mouse_genomes_project 1 151029221 151042447 + MGP_NODShiLtJ_P0021826 Slc45a3 protein_coding protein_coding MGP_NODShiLtJ_T0021827.1 MGP_NODShiLtJ_G0016335.1 mouse_genomes_project 1 151035331 151036558 + MGP_NODShiLtJ_P0021827 Slc45a3 protein_coding protein_coding MGP_NODShiLtJ_T0021828.1 MGP_NODShiLtJ_G0016335.1 mouse_genomes_project 1 151037576 151041389 + Slc45a3 protein_coding processed_transcript MGP_NODShiLtJ_T0012217.1 MGP_NODShiLtJ_G0010325.1 mouse_genomes_project 1 198368907 198369338 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011934.1 MGP_NODShiLtJ_G0010042.1 mouse_genomes_project 1 66855353 66855738 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000696.1 MGP_NODShiLtJ_G0000630.1 mouse_genomes_project 1 185120628 185122908 - TEC TEC MGP_NODShiLtJ_T0022136.1 MGP_NODShiLtJ_G0016401.1 mouse_genomes_project 1 155294968 155309480 + MGP_NODShiLtJ_P0022136 Lad1 protein_coding protein_coding MGP_NODShiLtJ_T0022137.1 MGP_NODShiLtJ_G0016401.1 mouse_genomes_project 1 155306132 155308845 + Lad1 protein_coding processed_transcript MGP_NODShiLtJ_T0022138.1 MGP_NODShiLtJ_G0016401.1 mouse_genomes_project 1 155306671 155308600 + Lad1 protein_coding processed_transcript MGP_NODShiLtJ_T0000530.1 MGP_NODShiLtJ_G0000466.1 mouse_genomes_project 1 94615201 94616841 - TEC TEC MGP_NODShiLtJ_T0020688.1 MGP_NODShiLtJ_G0016078.1 mouse_genomes_project 1 91151028 91428150 + MGP_NODShiLtJ_P0020688 Nyap2 protein_coding protein_coding MGP_NODShiLtJ_T0020689.1 MGP_NODShiLtJ_G0016078.1 mouse_genomes_project 1 91151277 91428125 + MGP_NODShiLtJ_P0020689 Nyap2 protein_coding protein_coding MGP_NODShiLtJ_T0020690.1 MGP_NODShiLtJ_G0016078.1 mouse_genomes_project 1 91151379 91392420 + MGP_NODShiLtJ_P0020690 Nyap2 protein_coding protein_coding MGP_NODShiLtJ_T0020691.1 MGP_NODShiLtJ_G0016078.1 mouse_genomes_project 1 91151386 91429312 + MGP_NODShiLtJ_P0020691 Nyap2 protein_coding protein_coding MGP_NODShiLtJ_T0020692.1 MGP_NODShiLtJ_G0016078.1 mouse_genomes_project 1 91151645 91489249 + MGP_NODShiLtJ_P0020692 Nyap2 protein_coding protein_coding MGP_NODShiLtJ_T0098582.1 MGP_NODShiLtJ_G0036976.1 mouse_genomes_project 1 196979651 196979767 - Gm24871 snRNA snRNA MGP_NODShiLtJ_T0012248.1 MGP_NODShiLtJ_G0010356.1 mouse_genomes_project 1 218602420 218602846 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000683.1 MGP_NODShiLtJ_G0000617.1 mouse_genomes_project 1 182089336 182352693 + TEC TEC MGP_NODShiLtJ_T0012194.1 MGP_NODShiLtJ_G0010302.1 mouse_genomes_project 1 190492350 190493930 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023647.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206960784 206989020 - MGP_NODShiLtJ_P0023647 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023648.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206960784 206991555 - MGP_NODShiLtJ_P0023648 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023649.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206962565 206991473 - MGP_NODShiLtJ_P0023649 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023650.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206962697 206974178 - MGP_NODShiLtJ_P0023650 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023651.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206962937 206991516 - MGP_NODShiLtJ_P0023651 Coq8a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023652.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206965669 206991496 - MGP_NODShiLtJ_P0023652 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023653.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206965676 206977644 - MGP_NODShiLtJ_P0023653 Coq8a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023654.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206966751 206974469 - Coq8a protein_coding retained_intron MGP_NODShiLtJ_T0023655.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206974553 206991496 - MGP_NODShiLtJ_P0023655 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023656.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206974618 206989018 - MGP_NODShiLtJ_P0023656 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023657.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206974655 206991610 - MGP_NODShiLtJ_P0023657 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023658.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206974682 206978347 - MGP_NODShiLtJ_P0023658 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023659.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206974688 206991507 - MGP_NODShiLtJ_P0023659 Coq8a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023660.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206974691 206989197 - MGP_NODShiLtJ_P0023660 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023661.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206974742 206991507 - MGP_NODShiLtJ_P0023661 Coq8a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023662.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206974794 206997080 - MGP_NODShiLtJ_P0023662 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0023663.1 MGP_NODShiLtJ_G0016735.1 mouse_genomes_project 1 206977719 206991437 - MGP_NODShiLtJ_P0023663 Coq8a protein_coding protein_coding MGP_NODShiLtJ_T0002928.1 MGP_NODShiLtJ_G0002745.1 mouse_genomes_project 1 212437207 212438825 + 2010103J01Rik antisense antisense MGP_NODShiLtJ_T0005785.1 MGP_NODShiLtJ_G0004849.1 mouse_genomes_project 1 104644822 104645987 - Gm28086 lincRNA lincRNA MGP_NODShiLtJ_T0101498.1 MGP_NODShiLtJ_G0039668.1 mouse_genomes_project 1 135172417 135174341 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011139.1 MGP_NODShiLtJ_G0009272.1 mouse_genomes_project 1 84240657 84240750 + Gm27507 misc_RNA misc_RNA MGP_NODShiLtJ_T0019467.1 MGP_NODShiLtJ_G0015857.1 mouse_genomes_project 1 48675797 48931080 + MGP_NODShiLtJ_P0019467 Gulp1 protein_coding protein_coding MGP_NODShiLtJ_T0019468.1 MGP_NODShiLtJ_G0015857.1 mouse_genomes_project 1 48675831 48928006 + Gulp1 protein_coding processed_transcript MGP_NODShiLtJ_T0019469.1 MGP_NODShiLtJ_G0015857.1 mouse_genomes_project 1 48676697 48830636 + MGP_NODShiLtJ_P0019469 Gulp1 protein_coding protein_coding MGP_NODShiLtJ_T0019470.1 MGP_NODShiLtJ_G0015857.1 mouse_genomes_project 1 48804770 48949689 + MGP_NODShiLtJ_P0019470 Gulp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019818.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65793728 65805789 + Cflar protein_coding processed_transcript MGP_NODShiLtJ_T0019819.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65793728 65848475 + Cflar protein_coding processed_transcript MGP_NODShiLtJ_T0019820.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65793730 65827782 + Cflar protein_coding processed_transcript MGP_NODShiLtJ_T0019821.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65793736 65806206 + Cflar protein_coding processed_transcript MGP_NODShiLtJ_T0019822.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65793754 65805792 + Cflar protein_coding processed_transcript MGP_NODShiLtJ_T0019823.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65793764 65811212 + Cflar protein_coding processed_transcript MGP_NODShiLtJ_T0019824.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65805196 65829761 + MGP_NODShiLtJ_P0019824 Cflar protein_coding protein_coding MGP_NODShiLtJ_T0019825.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65805204 65816726 + Cflar protein_coding processed_transcript MGP_NODShiLtJ_T0019826.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65805788 65811220 + Cflar protein_coding retained_intron MGP_NODShiLtJ_T0019827.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65822071 65853002 + MGP_NODShiLtJ_P0019827 Cflar protein_coding protein_coding MGP_NODShiLtJ_T0019828.1 MGP_NODShiLtJ_G0015922.1 mouse_genomes_project 1 65827172 65846587 + Cflar protein_coding processed_transcript MGP_NODShiLtJ_T0000576.1 MGP_NODShiLtJ_G0000512.1 mouse_genomes_project 1 138567358 138570479 + TEC TEC MGP_NODShiLtJ_T0021558.1 MGP_NODShiLtJ_G0016274.1 mouse_genomes_project 1 137692547 137700383 - MGP_NODShiLtJ_P0021558 Tmem37 protein_coding protein_coding MGP_NODShiLtJ_T0009398.1 MGP_NODShiLtJ_G0007531.1 mouse_genomes_project 1 59810191 59810316 - Gm25240 miRNA miRNA MGP_NODShiLtJ_T0011854.1 MGP_NODShiLtJ_G0009962.1 mouse_genomes_project 1 38137023 38137258 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019565.1 MGP_NODShiLtJ_G0015873.1 mouse_genomes_project 1 58653336 58699332 - MGP_NODShiLtJ_P0019565 Nab1 protein_coding protein_coding MGP_NODShiLtJ_T0019566.1 MGP_NODShiLtJ_G0015873.1 mouse_genomes_project 1 58653336 58698948 - MGP_NODShiLtJ_P0019566 Nab1 protein_coding protein_coding MGP_NODShiLtJ_T0019567.1 MGP_NODShiLtJ_G0015873.1 mouse_genomes_project 1 58655256 58689389 - MGP_NODShiLtJ_P0019567 Nab1 protein_coding protein_coding MGP_NODShiLtJ_T0019568.1 MGP_NODShiLtJ_G0015873.1 mouse_genomes_project 1 58655279 58663099 - Nab1 protein_coding retained_intron MGP_NODShiLtJ_T0019569.1 MGP_NODShiLtJ_G0015873.1 mouse_genomes_project 1 58688962 58698963 - Nab1 protein_coding processed_transcript MGP_NODShiLtJ_T0019482.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50193844 50227296 + MGP_NODShiLtJ_P0019482 Wdr75 protein_coding protein_coding MGP_NODShiLtJ_T0019483.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50194127 50227281 + Wdr75 protein_coding retained_intron MGP_NODShiLtJ_T0019484.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50194181 50205261 + Wdr75 protein_coding retained_intron MGP_NODShiLtJ_T0019485.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50194185 50206833 + MGP_NODShiLtJ_P0019485 Wdr75 protein_coding protein_coding MGP_NODShiLtJ_T0019486.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50204894 50227192 + Wdr75 protein_coding processed_transcript MGP_NODShiLtJ_T0019487.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50206590 50208351 + Wdr75 protein_coding processed_transcript MGP_NODShiLtJ_T0019488.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50218357 50227296 + Wdr75 protein_coding retained_intron MGP_NODShiLtJ_T0019489.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50225945 50227190 + Wdr75 protein_coding retained_intron MGP_NODShiLtJ_T0019490.1 MGP_NODShiLtJ_G0015860.1 mouse_genomes_project 1 50226237 50227293 + MGP_NODShiLtJ_P0019490 Wdr75 protein_coding protein_coding MGP_NODShiLtJ_T0000364.1 MGP_NODShiLtJ_G0000302.1 mouse_genomes_project 1 8489901 8490821 - TEC TEC MGP_NODShiLtJ_T0011846.1 MGP_NODShiLtJ_G0009954.1 mouse_genomes_project 1 37748312 37748547 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011796.1 MGP_NODShiLtJ_G0009904.1 mouse_genomes_project 1 19069181 19069653 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022076.1 MGP_NODShiLtJ_G0016389.1 mouse_genomes_project 1 154570705 154581134 + MGP_NODShiLtJ_P0022076 Arl8a protein_coding protein_coding MGP_NODShiLtJ_T0022077.1 MGP_NODShiLtJ_G0016389.1 mouse_genomes_project 1 154571550 154581134 + MGP_NODShiLtJ_P0022077 Arl8a protein_coding protein_coding MGP_NODShiLtJ_T0022078.1 MGP_NODShiLtJ_G0016389.1 mouse_genomes_project 1 154575762 154579144 + Arl8a protein_coding retained_intron MGP_NODShiLtJ_T0022079.1 MGP_NODShiLtJ_G0016389.1 mouse_genomes_project 1 154579030 154580183 + Arl8a protein_coding retained_intron MGP_NODShiLtJ_T0000776.1 MGP_NODShiLtJ_G0000708.1 mouse_genomes_project 1 219774076 219774209 + TEC TEC MGP_NODShiLtJ_T0023240.1 MGP_NODShiLtJ_G0016623.1 mouse_genomes_project 1 196758094 196765240 - MGP_NODShiLtJ_P0023240 Ufc1 protein_coding protein_coding MGP_NODShiLtJ_T0023241.1 MGP_NODShiLtJ_G0016623.1 mouse_genomes_project 1 196758096 196759937 - Ufc1 protein_coding retained_intron MGP_NODShiLtJ_T0023242.1 MGP_NODShiLtJ_G0016623.1 mouse_genomes_project 1 196758225 196765157 - MGP_NODShiLtJ_P0023242 Ufc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023243.1 MGP_NODShiLtJ_G0016623.1 mouse_genomes_project 1 196758243 196765203 - MGP_NODShiLtJ_P0023243 Ufc1 protein_coding protein_coding MGP_NODShiLtJ_T0023244.1 MGP_NODShiLtJ_G0016623.1 mouse_genomes_project 1 196758308 196765156 - Ufc1 protein_coding retained_intron MGP_NODShiLtJ_T0022963.1 MGP_NODShiLtJ_G0016562.1 mouse_genomes_project 1 190317120 190458226 - MGP_NODShiLtJ_P0022963 Dcaf6 protein_coding protein_coding MGP_NODShiLtJ_T0022964.1 MGP_NODShiLtJ_G0016562.1 mouse_genomes_project 1 190317792 190350881 - Dcaf6 protein_coding retained_intron MGP_NODShiLtJ_T0022965.1 MGP_NODShiLtJ_G0016562.1 mouse_genomes_project 1 190349940 190403432 - MGP_NODShiLtJ_P0022965 Dcaf6 protein_coding protein_coding MGP_NODShiLtJ_T0022966.1 MGP_NODShiLtJ_G0016562.1 mouse_genomes_project 1 190350370 190403447 - MGP_NODShiLtJ_P0022966 Dcaf6 protein_coding protein_coding MGP_NODShiLtJ_T0022967.1 MGP_NODShiLtJ_G0016562.1 mouse_genomes_project 1 190373738 190458236 - Dcaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0012133.1 MGP_NODShiLtJ_G0010241.1 mouse_genomes_project 1 158675980 158676203 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020784.1 MGP_NODShiLtJ_G0016096.1 mouse_genomes_project 1 95474800 95505819 - MGP_NODShiLtJ_P0020784 Slc16a14 protein_coding protein_coding MGP_NODShiLtJ_T0020785.1 MGP_NODShiLtJ_G0016096.1 mouse_genomes_project 1 95498822 95505542 - MGP_NODShiLtJ_P0020785 Slc16a14 protein_coding protein_coding MGP_NODShiLtJ_T0021110.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102726645 102751078 + MGP_NODShiLtJ_P0021110 Scly protein_coding protein_coding MGP_NODShiLtJ_T0021111.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102726667 102733262 + Scly protein_coding retained_intron MGP_NODShiLtJ_T0021112.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102726675 102738750 + MGP_NODShiLtJ_P0021112 Scly protein_coding protein_coding MGP_NODShiLtJ_T0021113.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102726676 102739858 + MGP_NODShiLtJ_P0021113 Scly protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021114.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102726677 102741337 + Scly protein_coding retained_intron MGP_NODShiLtJ_T0021115.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102726711 102738716 + MGP_NODShiLtJ_P0021115 Scly protein_coding protein_coding MGP_NODShiLtJ_T0021116.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102726714 102738822 + MGP_NODShiLtJ_P0021116 Scly protein_coding protein_coding MGP_NODShiLtJ_T0021117.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102726734 102735189 + Scly protein_coding processed_transcript MGP_NODShiLtJ_T0021118.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102729686 102732620 + MGP_NODShiLtJ_P0021118 Scly protein_coding protein_coding MGP_NODShiLtJ_T0021119.1 MGP_NODShiLtJ_G0016173.1 mouse_genomes_project 1 102732547 102739879 + MGP_NODShiLtJ_P0021119 Scly protein_coding protein_coding MGP_NODShiLtJ_T0011867.1 MGP_NODShiLtJ_G0009975.1 mouse_genomes_project 1 47420645 47421025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020693.1 MGP_NODShiLtJ_G0016079.1 mouse_genomes_project 1 92527591 92589304 - MGP_NODShiLtJ_P0020693 Irs1 protein_coding protein_coding MGP_NODShiLtJ_T0020590.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84975538 84991301 + MGP_NODShiLtJ_P0020590 Stk11ip protein_coding protein_coding MGP_NODShiLtJ_T0020591.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84975561 84990901 + MGP_NODShiLtJ_P0020591 Stk11ip protein_coding protein_coding MGP_NODShiLtJ_T0020592.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84975800 84990904 + Stk11ip protein_coding retained_intron MGP_NODShiLtJ_T0020593.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84975820 84981082 + Stk11ip protein_coding retained_intron MGP_NODShiLtJ_T0020594.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84982274 84983453 + Stk11ip protein_coding retained_intron MGP_NODShiLtJ_T0020595.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84982609 84990904 + Stk11ip protein_coding retained_intron MGP_NODShiLtJ_T0020596.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84983643 84986306 + Stk11ip protein_coding retained_intron MGP_NODShiLtJ_T0020597.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84986499 84988222 + Stk11ip protein_coding retained_intron MGP_NODShiLtJ_T0020598.1 MGP_NODShiLtJ_G0016059.1 mouse_genomes_project 1 84987006 84987753 + Stk11ip protein_coding processed_transcript MGP_NODShiLtJ_T0009381.1 MGP_NODShiLtJ_G0007514.1 mouse_genomes_project 1 23564795 23564866 + Mir30a miRNA miRNA MGP_NODShiLtJ_T0022233.1 MGP_NODShiLtJ_G0016420.1 mouse_genomes_project 1 158641318 158660896 - MGP_NODShiLtJ_P0022233 Lhx9 protein_coding protein_coding MGP_NODShiLtJ_T0022234.1 MGP_NODShiLtJ_G0016420.1 mouse_genomes_project 1 158641318 158665991 - MGP_NODShiLtJ_P0022234 Lhx9 protein_coding protein_coding MGP_NODShiLtJ_T0022235.1 MGP_NODShiLtJ_G0016420.1 mouse_genomes_project 1 158641318 158666887 - MGP_NODShiLtJ_P0022235 Lhx9 protein_coding protein_coding MGP_NODShiLtJ_T0022236.1 MGP_NODShiLtJ_G0016420.1 mouse_genomes_project 1 158646261 158666079 - MGP_NODShiLtJ_P0022236 Lhx9 protein_coding protein_coding MGP_NODShiLtJ_T0022237.1 MGP_NODShiLtJ_G0016420.1 mouse_genomes_project 1 158648916 158660868 - MGP_NODShiLtJ_P0022237 Lhx9 protein_coding protein_coding MGP_NODShiLtJ_T0022238.1 MGP_NODShiLtJ_G0016420.1 mouse_genomes_project 1 158650231 158652151 - Lhx9 protein_coding retained_intron MGP_NODShiLtJ_T0022239.1 MGP_NODShiLtJ_G0016420.1 mouse_genomes_project 1 158651367 158660893 - MGP_NODShiLtJ_P0022239 Lhx9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011918.1 MGP_NODShiLtJ_G0010026.1 mouse_genomes_project 1 61831741 61832529 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002703.1 MGP_NODShiLtJ_G0002574.1 mouse_genomes_project 1 8134940 8190147 + 1700034P13Rik antisense antisense MGP_NODShiLtJ_T0002704.1 MGP_NODShiLtJ_G0002574.1 mouse_genomes_project 1 8135465 8167143 + 1700034P13Rik antisense antisense MGP_NODShiLtJ_T0002705.1 MGP_NODShiLtJ_G0002574.1 mouse_genomes_project 1 8135571 8166982 + 1700034P13Rik antisense antisense MGP_NODShiLtJ_T0018544.1 MGP_NODShiLtJ_G0015677.1 mouse_genomes_project 1 1858820 1864307 - MGP_NODShiLtJ_P0018544 Sox17 protein_coding protein_coding MGP_NODShiLtJ_T0018545.1 MGP_NODShiLtJ_G0015677.1 mouse_genomes_project 1 1859139 1864651 - MGP_NODShiLtJ_P0018545 Sox17 protein_coding protein_coding MGP_NODShiLtJ_T0018546.1 MGP_NODShiLtJ_G0015677.1 mouse_genomes_project 1 1859279 1865248 - MGP_NODShiLtJ_P0018546 Sox17 protein_coding protein_coding MGP_NODShiLtJ_T0018547.1 MGP_NODShiLtJ_G0015677.1 mouse_genomes_project 1 1859602 1864257 - MGP_NODShiLtJ_P0018547 Sox17 protein_coding protein_coding MGP_NODShiLtJ_T0018548.1 MGP_NODShiLtJ_G0015677.1 mouse_genomes_project 1 1860346 1861494 - Sox17 protein_coding retained_intron MGP_NODShiLtJ_T0018549.1 MGP_NODShiLtJ_G0015677.1 mouse_genomes_project 1 1860347 1864224 - MGP_NODShiLtJ_P0018549 Sox17 protein_coding protein_coding MGP_NODShiLtJ_T0018550.1 MGP_NODShiLtJ_G0015677.1 mouse_genomes_project 1 1860354 1861625 - MGP_NODShiLtJ_P0018550 Sox17 protein_coding protein_coding MGP_NODShiLtJ_T0018551.1 MGP_NODShiLtJ_G0015677.1 mouse_genomes_project 1 1860356 1864290 - MGP_NODShiLtJ_P0018551 Sox17 protein_coding protein_coding MGP_NODShiLtJ_T0023593.1 MGP_NODShiLtJ_G0016725.1 mouse_genomes_project 1 205145852 205339403 + Kif26b protein_coding retained_intron MGP_NODShiLtJ_T0023594.1 MGP_NODShiLtJ_G0016725.1 mouse_genomes_project 1 205145852 205579845 + MGP_NODShiLtJ_P0023594 Kif26b protein_coding protein_coding MGP_NODShiLtJ_T0023595.1 MGP_NODShiLtJ_G0016725.1 mouse_genomes_project 1 205428924 205573501 + MGP_NODShiLtJ_P0023595 Kif26b protein_coding protein_coding MGP_NODShiLtJ_T0099773.1 MGP_NODShiLtJ_G0038167.1 mouse_genomes_project 1 94374567 94374691 + Gm24555 snoRNA snoRNA MGP_NODShiLtJ_T0011768.1 MGP_NODShiLtJ_G0009876.1 mouse_genomes_project 1 7899731 7900741 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018541.1 MGP_NODShiLtJ_G0015675.1 mouse_genomes_project 1 1261709 1444630 - MGP_NODShiLtJ_P0018541 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0099753.1 MGP_NODShiLtJ_G0038147.1 mouse_genomes_project 1 46815047 46815181 - Gm23126 snoRNA snoRNA MGP_NODShiLtJ_T0002766.1 MGP_NODShiLtJ_G0002621.1 mouse_genomes_project 1 66286622 66305784 + Gm29017 antisense antisense MGP_NODShiLtJ_T0019712.1 MGP_NODShiLtJ_G0015904.1 mouse_genomes_project 1 64313374 64322434 + MGP_NODShiLtJ_P0019712 protein_coding protein_coding MGP_NODShiLtJ_T0019713.1 MGP_NODShiLtJ_G0015904.1 mouse_genomes_project 1 64313387 64315917 + protein_coding processed_transcript MGP_NODShiLtJ_T0019714.1 MGP_NODShiLtJ_G0015904.1 mouse_genomes_project 1 64313394 64315833 + protein_coding processed_transcript MGP_NODShiLtJ_T0005666.1 MGP_NODShiLtJ_G0004755.1 mouse_genomes_project 1 57618412 57623649 - Gm17767 lincRNA lincRNA MGP_NODShiLtJ_T0005667.1 MGP_NODShiLtJ_G0004755.1 mouse_genomes_project 1 57620824 57711718 - Gm17767 lincRNA lincRNA MGP_NODShiLtJ_T0000592.1 MGP_NODShiLtJ_G0000528.1 mouse_genomes_project 1 144526089 144527411 - TEC TEC MGP_NODShiLtJ_T0005926.1 MGP_NODShiLtJ_G0004961.1 mouse_genomes_project 1 192352282 192352981 + Gm2453 lincRNA lincRNA MGP_NODShiLtJ_T0005927.1 MGP_NODShiLtJ_G0004961.1 mouse_genomes_project 1 192352698 192357071 + Gm2453 lincRNA lincRNA MGP_NODShiLtJ_T0009404.1 MGP_NODShiLtJ_G0007537.1 mouse_genomes_project 1 70795473 70795599 + Gm27512 miRNA miRNA MGP_NODShiLtJ_T0099813.1 MGP_NODShiLtJ_G0038207.1 mouse_genomes_project 1 185589616 185589676 + Gm23212 snoRNA snoRNA MGP_NODShiLtJ_T0011830.1 MGP_NODShiLtJ_G0009938.1 mouse_genomes_project 1 34121804 34123665 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101468.1 MGP_NODShiLtJ_G0039638.1 mouse_genomes_project 1 33209370 33213092 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101472.1 MGP_NODShiLtJ_G0039642.1 mouse_genomes_project 1 73247558 73247830 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011767.1 MGP_NODShiLtJ_G0009875.1 mouse_genomes_project 1 7899711 7900806 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012115.1 MGP_NODShiLtJ_G0010223.1 mouse_genomes_project 1 148574763 148576442 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000585.1 MGP_NODShiLtJ_G0000521.1 mouse_genomes_project 1 141557910 141561154 - TEC TEC MGP_NODShiLtJ_T0019615.1 MGP_NODShiLtJ_G0015883.1 mouse_genomes_project 1 59596026 59618717 + MGP_NODShiLtJ_P0019615 Gm28778 protein_coding protein_coding MGP_NODShiLtJ_T0098511.1 MGP_NODShiLtJ_G0036905.1 mouse_genomes_project 1 20301319 20301421 - Gm24162 snRNA snRNA MGP_NODShiLtJ_T0021070.1 MGP_NODShiLtJ_G0016166.1 mouse_genomes_project 1 102314639 102356520 + MGP_NODShiLtJ_P0021070 Mlph protein_coding protein_coding MGP_NODShiLtJ_T0021071.1 MGP_NODShiLtJ_G0016166.1 mouse_genomes_project 1 102314662 102356519 + MGP_NODShiLtJ_P0021071 Mlph protein_coding unknown_likely_coding MGP_NODShiLtJ_T0021072.1 MGP_NODShiLtJ_G0016166.1 mouse_genomes_project 1 102327233 102327987 + MGP_NODShiLtJ_P0021072 Mlph protein_coding protein_coding MGP_NODShiLtJ_T0021073.1 MGP_NODShiLtJ_G0016166.1 mouse_genomes_project 1 102343016 102344087 + Mlph protein_coding retained_intron MGP_NODShiLtJ_T0012244.1 MGP_NODShiLtJ_G0010352.1 mouse_genomes_project 1 216717476 216717857 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012088.1 MGP_NODShiLtJ_G0010196.1 mouse_genomes_project 1 136739396 136740198 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098226.1 MGP_NODShiLtJ_G0036638.1 mouse_genomes_project 1 78510225 78512096 - Gm28112 sense_intronic sense_intronic MGP_NODShiLtJ_T0023560.1 MGP_NODShiLtJ_G0016716.1 mouse_genomes_project 1 203323400 203603481 - MGP_NODShiLtJ_P0023560 Akt3 protein_coding protein_coding MGP_NODShiLtJ_T0023561.1 MGP_NODShiLtJ_G0016716.1 mouse_genomes_project 1 203323402 203594906 - MGP_NODShiLtJ_P0023561 Akt3 protein_coding protein_coding MGP_NODShiLtJ_T0002939.1 MGP_NODShiLtJ_G0002755.1 mouse_genomes_project 1 217374666 217379384 + Gm37422 antisense antisense MGP_NODShiLtJ_T0000473.1 MGP_NODShiLtJ_G0000409.1 mouse_genomes_project 1 67154148 67159634 + TEC TEC MGP_NODShiLtJ_T0019301.1 MGP_NODShiLtJ_G0015821.1 mouse_genomes_project 1 42715098 42810477 + MGP_NODShiLtJ_P0019301 Npas2 protein_coding protein_coding MGP_NODShiLtJ_T0019302.1 MGP_NODShiLtJ_G0015821.1 mouse_genomes_project 1 42715579 42893592 + MGP_NODShiLtJ_P0019302 Npas2 protein_coding protein_coding MGP_NODShiLtJ_T0019303.1 MGP_NODShiLtJ_G0015821.1 mouse_genomes_project 1 42869401 42873288 + Npas2 protein_coding processed_transcript MGP_NODShiLtJ_T0021690.1 MGP_NODShiLtJ_G0016299.1 mouse_genomes_project 1 146867872 146884960 + MGP_NODShiLtJ_P0021690 Ubxn4 protein_coding protein_coding MGP_NODShiLtJ_T0021691.1 MGP_NODShiLtJ_G0016299.1 mouse_genomes_project 1 146868070 146911017 + MGP_NODShiLtJ_P0021691 Ubxn4 protein_coding protein_coding MGP_NODShiLtJ_T0021692.1 MGP_NODShiLtJ_G0016299.1 mouse_genomes_project 1 146884928 146904636 + Ubxn4 protein_coding retained_intron MGP_NODShiLtJ_T0021693.1 MGP_NODShiLtJ_G0016299.1 mouse_genomes_project 1 146906096 146908490 + Ubxn4 protein_coding retained_intron MGP_NODShiLtJ_T0099790.1 MGP_NODShiLtJ_G0038184.1 mouse_genomes_project 1 130494648 130494782 - Gm24937 snoRNA snoRNA MGP_NODShiLtJ_T0000770.1 MGP_NODShiLtJ_G0000702.1 mouse_genomes_project 1 216487049 216488588 + TEC TEC MGP_NODShiLtJ_T0011953.1 MGP_NODShiLtJ_G0010061.1 mouse_genomes_project 1 70591269 70591637 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000695.1 MGP_NODShiLtJ_G0000629.1 mouse_genomes_project 1 185069173 185072632 - TEC TEC MGP_NODShiLtJ_T0012234.1 MGP_NODShiLtJ_G0010342.1 mouse_genomes_project 1 209371368 209372361 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000633.1 MGP_NODShiLtJ_G0000568.1 mouse_genomes_project 1 157609120 157613986 + TEC TEC MGP_NODShiLtJ_T0023894.1 MGP_NODShiLtJ_G0016787.1 mouse_genomes_project 1 213269262 213292155 - MGP_NODShiLtJ_P0023894 Lyplal1 protein_coding protein_coding MGP_NODShiLtJ_T0023895.1 MGP_NODShiLtJ_G0016787.1 mouse_genomes_project 1 213270064 213292133 - Lyplal1 protein_coding processed_transcript MGP_NODShiLtJ_T0019040.1 MGP_NODShiLtJ_G0015774.1 mouse_genomes_project 1 37525820 37535308 + MGP_NODShiLtJ_P0019040 Imp4 protein_coding protein_coding MGP_NODShiLtJ_T0019041.1 MGP_NODShiLtJ_G0015774.1 mouse_genomes_project 1 37525867 37528522 + Imp4 protein_coding retained_intron MGP_NODShiLtJ_T0019042.1 MGP_NODShiLtJ_G0015774.1 mouse_genomes_project 1 37525874 37529807 + MGP_NODShiLtJ_P0019042 Imp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019043.1 MGP_NODShiLtJ_G0015774.1 mouse_genomes_project 1 37525874 37530338 + MGP_NODShiLtJ_P0019043 Imp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019044.1 MGP_NODShiLtJ_G0015774.1 mouse_genomes_project 1 37525906 37529978 + Imp4 protein_coding processed_transcript MGP_NODShiLtJ_T0019045.1 MGP_NODShiLtJ_G0015774.1 mouse_genomes_project 1 37525922 37529406 + Imp4 protein_coding processed_transcript MGP_NODShiLtJ_T0019046.1 MGP_NODShiLtJ_G0015774.1 mouse_genomes_project 1 37526010 37530465 + MGP_NODShiLtJ_P0019046 Imp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019047.1 MGP_NODShiLtJ_G0015774.1 mouse_genomes_project 1 37534198 37534890 + Imp4 protein_coding processed_transcript MGP_NODShiLtJ_T0012225.1 MGP_NODShiLtJ_G0010333.1 mouse_genomes_project 1 206228794 206229313 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012130.1 MGP_NODShiLtJ_G0010238.1 mouse_genomes_project 1 157940226 157940710 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011927.1 MGP_NODShiLtJ_G0010035.1 mouse_genomes_project 1 64504706 64507513 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005774.1 MGP_NODShiLtJ_G0004838.1 mouse_genomes_project 1 102043121 102047754 + Gm9991 lincRNA lincRNA MGP_NODShiLtJ_T0009466.1 MGP_NODShiLtJ_G0007599.1 mouse_genomes_project 1 203181197 203181277 + Gm25993 miRNA miRNA MGP_NODShiLtJ_T0000432.1 MGP_NODShiLtJ_G0000368.1 mouse_genomes_project 1 37346830 37348077 - TEC TEC MGP_NODShiLtJ_T0099791.1 MGP_NODShiLtJ_G0038185.1 mouse_genomes_project 1 135934048 135934179 - Gm26080 snoRNA snoRNA MGP_NODShiLtJ_T0020268.1 MGP_NODShiLtJ_G0016006.1 mouse_genomes_project 1 83556772 83581692 + MGP_NODShiLtJ_P0020268 Rufy4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020269.1 MGP_NODShiLtJ_G0016006.1 mouse_genomes_project 1 83557195 83582169 + MGP_NODShiLtJ_P0020269 Rufy4 protein_coding protein_coding MGP_NODShiLtJ_T0022798.1 MGP_NODShiLtJ_G0016523.1 mouse_genomes_project 1 186080427 186094578 + MGP_NODShiLtJ_P0022798 Tnfsf18 protein_coding protein_coding MGP_NODShiLtJ_T0005848.1 MGP_NODShiLtJ_G0004900.1 mouse_genomes_project 1 154008837 154013077 - Gm26783 lincRNA lincRNA MGP_NODShiLtJ_T0022766.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185623564 185640357 + MGP_NODShiLtJ_P0022766 Cenpl protein_coding protein_coding MGP_NODShiLtJ_T0022767.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185623618 185639975 + MGP_NODShiLtJ_P0022767 Cenpl protein_coding protein_coding MGP_NODShiLtJ_T0022768.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185623618 185639975 + MGP_NODShiLtJ_P0022768 Cenpl protein_coding protein_coding MGP_NODShiLtJ_T0022769.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185623743 185639961 + MGP_NODShiLtJ_P0022769 Cenpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022770.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185623801 185639961 + MGP_NODShiLtJ_P0022770 Cenpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022771.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185623817 185640361 + MGP_NODShiLtJ_P0022771 Cenpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022772.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185623836 185636283 + MGP_NODShiLtJ_P0022772 Cenpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022773.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185623867 185639975 + MGP_NODShiLtJ_P0022773 Cenpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022774.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185625256 185625845 + Cenpl protein_coding processed_transcript MGP_NODShiLtJ_T0022775.1 MGP_NODShiLtJ_G0016518.1 mouse_genomes_project 1 185628864 185636194 + Cenpl protein_coding processed_transcript MGP_NODShiLtJ_T0011982.1 MGP_NODShiLtJ_G0010090.1 mouse_genomes_project 1 82874683 82875679 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011804.1 MGP_NODShiLtJ_G0009912.1 mouse_genomes_project 1 22152442 22152994 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000489.1 MGP_NODShiLtJ_G0000425.1 mouse_genomes_project 1 74847227 74850330 - TEC TEC MGP_NODShiLtJ_T0012124.1 MGP_NODShiLtJ_G0010232.1 mouse_genomes_project 1 155347174 155347543 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018641.1 MGP_NODShiLtJ_G0015692.1 mouse_genomes_project 1 7904459 7937104 + MGP_NODShiLtJ_P0018641 Adhfe1 protein_coding protein_coding MGP_NODShiLtJ_T0018642.1 MGP_NODShiLtJ_G0015692.1 mouse_genomes_project 1 7904566 7936036 + MGP_NODShiLtJ_P0018642 Adhfe1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018643.1 MGP_NODShiLtJ_G0015692.1 mouse_genomes_project 1 7904603 7911344 + MGP_NODShiLtJ_P0018643 Adhfe1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018644.1 MGP_NODShiLtJ_G0015692.1 mouse_genomes_project 1 7904618 7913223 + MGP_NODShiLtJ_P0018644 Adhfe1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018645.1 MGP_NODShiLtJ_G0015692.1 mouse_genomes_project 1 7904630 7939803 + MGP_NODShiLtJ_P0018645 Adhfe1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002919.1 MGP_NODShiLtJ_G0002738.1 mouse_genomes_project 1 207055765 207077009 + Gm31728 antisense antisense MGP_NODShiLtJ_T0000419.1 MGP_NODShiLtJ_G0000356.1 mouse_genomes_project 1 35359163 35361574 + TEC TEC MGP_NODShiLtJ_T0019829.1 MGP_NODShiLtJ_G0015923.1 mouse_genomes_project 1 65893559 65941392 + MGP_NODShiLtJ_P0019829 Casp8 protein_coding protein_coding MGP_NODShiLtJ_T0019830.1 MGP_NODShiLtJ_G0015923.1 mouse_genomes_project 1 65893662 65940643 + MGP_NODShiLtJ_P0019830 Casp8 protein_coding protein_coding MGP_NODShiLtJ_T0019831.1 MGP_NODShiLtJ_G0015923.1 mouse_genomes_project 1 65902127 65940897 + MGP_NODShiLtJ_P0019831 Casp8 protein_coding protein_coding MGP_NODShiLtJ_T0019832.1 MGP_NODShiLtJ_G0015923.1 mouse_genomes_project 1 65902278 65940643 + MGP_NODShiLtJ_P0019832 Casp8 protein_coding protein_coding MGP_NODShiLtJ_T0002906.1 MGP_NODShiLtJ_G0002726.1 mouse_genomes_project 1 197167873 197169024 + Gm37787 antisense antisense MGP_NODShiLtJ_T0023849.1 MGP_NODShiLtJ_G0016776.1 mouse_genomes_project 1 211052656 211053928 - 1700056E22Rik protein_coding antisense MGP_NODShiLtJ_T0023850.1 MGP_NODShiLtJ_G0016776.1 mouse_genomes_project 1 211052658 211053625 - MGP_NODShiLtJ_P0023850 1700056E22Rik protein_coding protein_coding MGP_NODShiLtJ_T0101489.1 MGP_NODShiLtJ_G0039659.1 mouse_genomes_project 1 104083152 104083264 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011128.1 MGP_NODShiLtJ_G0009261.1 mouse_genomes_project 1 14933848 14934151 + Gm23259 misc_RNA misc_RNA MGP_NODShiLtJ_T0018843.1 MGP_NODShiLtJ_G0015728.1 mouse_genomes_project 1 16312954 16332846 + MGP_NODShiLtJ_P0018843 Gdap1 protein_coding protein_coding MGP_NODShiLtJ_T0018844.1 MGP_NODShiLtJ_G0015728.1 mouse_genomes_project 1 16312996 16327319 + Gdap1 protein_coding retained_intron MGP_NODShiLtJ_T0018845.1 MGP_NODShiLtJ_G0015728.1 mouse_genomes_project 1 16313060 16330206 + MGP_NODShiLtJ_P0018845 Gdap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018846.1 MGP_NODShiLtJ_G0015728.1 mouse_genomes_project 1 16326944 16330624 + Gdap1 protein_coding retained_intron MGP_NODShiLtJ_T0101503.1 MGP_NODShiLtJ_G0039673.1 mouse_genomes_project 1 185737331 185801208 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012100.1 MGP_NODShiLtJ_G0010208.1 mouse_genomes_project 1 140031733 140032568 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005762.1 MGP_NODShiLtJ_G0004827.1 mouse_genomes_project 1 99798284 99812225 + Gm19589 lincRNA lincRNA MGP_NODShiLtJ_T0019902.1 MGP_NODShiLtJ_G0015935.1 mouse_genomes_project 1 66963121 67085681 + MGP_NODShiLtJ_P0019902 Bmpr2 protein_coding protein_coding MGP_NODShiLtJ_T0019903.1 MGP_NODShiLtJ_G0015935.1 mouse_genomes_project 1 67064017 67068981 + Bmpr2 protein_coding retained_intron MGP_NODShiLtJ_T0022696.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183507413 183526284 + MGP_NODShiLtJ_P0022696 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022697.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183507415 183655185 + MGP_NODShiLtJ_P0022697 protein_coding protein_coding MGP_NODShiLtJ_T0022698.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183507527 183652383 + MGP_NODShiLtJ_P0022698 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022699.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183508554 183526294 + MGP_NODShiLtJ_P0022699 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022700.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183553411 183571555 + protein_coding retained_intron MGP_NODShiLtJ_T0022701.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183614005 183616415 + protein_coding retained_intron MGP_NODShiLtJ_T0022702.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183614016 183632312 + MGP_NODShiLtJ_P0022702 protein_coding protein_coding MGP_NODShiLtJ_T0022703.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183615803 183632391 + protein_coding retained_intron MGP_NODShiLtJ_T0022704.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183628278 183633239 + protein_coding retained_intron MGP_NODShiLtJ_T0022705.1 MGP_NODShiLtJ_G0016507.1 mouse_genomes_project 1 183649900 183652645 + protein_coding retained_intron MGP_NODShiLtJ_T0019452.1 MGP_NODShiLtJ_G0015854.1 mouse_genomes_project 1 48174318 48182825 + MGP_NODShiLtJ_P0019452 Bivm protein_coding protein_coding MGP_NODShiLtJ_T0019453.1 MGP_NODShiLtJ_G0015854.1 mouse_genomes_project 1 48174361 48182588 + Bivm protein_coding processed_transcript MGP_NODShiLtJ_T0019454.1 MGP_NODShiLtJ_G0015854.1 mouse_genomes_project 1 48174523 48201840 + MGP_NODShiLtJ_P0019454 Bivm protein_coding protein_coding MGP_NODShiLtJ_T0019455.1 MGP_NODShiLtJ_G0015854.1 mouse_genomes_project 1 48174869 48182606 + Bivm protein_coding processed_transcript MGP_NODShiLtJ_T0019456.1 MGP_NODShiLtJ_G0015854.1 mouse_genomes_project 1 48175328 48202126 + MGP_NODShiLtJ_P0019456 Bivm protein_coding protein_coding MGP_NODShiLtJ_T0019457.1 MGP_NODShiLtJ_G0015854.1 mouse_genomes_project 1 48175339 48182666 + MGP_NODShiLtJ_P0019457 Bivm protein_coding protein_coding MGP_NODShiLtJ_T0012208.1 MGP_NODShiLtJ_G0010316.1 mouse_genomes_project 1 194864455 194865072 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005777.1 MGP_NODShiLtJ_G0004841.1 mouse_genomes_project 1 102838820 102839971 - 1700020N18Rik lincRNA lincRNA MGP_NODShiLtJ_T0011851.1 MGP_NODShiLtJ_G0009959.1 mouse_genomes_project 1 38068003 38070140 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002883.1 MGP_NODShiLtJ_G0002710.1 mouse_genomes_project 1 186653100 186665448 + 2810442N19Rik antisense antisense MGP_NODShiLtJ_T0002884.1 MGP_NODShiLtJ_G0002710.1 mouse_genomes_project 1 186653303 186665457 + 2810442N19Rik antisense antisense MGP_NODShiLtJ_T0000495.1 MGP_NODShiLtJ_G0000431.1 mouse_genomes_project 1 76224820 76227121 + TEC TEC MGP_NODShiLtJ_T0005729.1 MGP_NODShiLtJ_G0004800.1 mouse_genomes_project 1 82892012 82899424 + Gm29186 lincRNA lincRNA MGP_NODShiLtJ_T0012132.1 MGP_NODShiLtJ_G0010240.1 mouse_genomes_project 1 158506604 158506926 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002723.1 MGP_NODShiLtJ_G0002587.1 mouse_genomes_project 1 21171055 21199203 - Gm28836 antisense antisense MGP_NODShiLtJ_T0018664.1 MGP_NODShiLtJ_G0015697.1 mouse_genomes_project 1 8326313 8361262 + MGP_NODShiLtJ_P0018664 Mcmdc2 protein_coding protein_coding MGP_NODShiLtJ_T0018665.1 MGP_NODShiLtJ_G0015697.1 mouse_genomes_project 1 8326313 8340267 + MGP_NODShiLtJ_P0018665 Mcmdc2 protein_coding protein_coding MGP_NODShiLtJ_T0018666.1 MGP_NODShiLtJ_G0015697.1 mouse_genomes_project 1 8326319 8361251 + MGP_NODShiLtJ_P0018666 Mcmdc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018667.1 MGP_NODShiLtJ_G0015697.1 mouse_genomes_project 1 8326343 8360762 + MGP_NODShiLtJ_P0018667 Mcmdc2 protein_coding protein_coding MGP_NODShiLtJ_T0018668.1 MGP_NODShiLtJ_G0015697.1 mouse_genomes_project 1 8326345 8362392 + MGP_NODShiLtJ_P0018668 Mcmdc2 protein_coding protein_coding MGP_NODShiLtJ_T0018669.1 MGP_NODShiLtJ_G0015697.1 mouse_genomes_project 1 8329001 8339008 + MGP_NODShiLtJ_P0018669 Mcmdc2 protein_coding protein_coding MGP_NODShiLtJ_T0018670.1 MGP_NODShiLtJ_G0015697.1 mouse_genomes_project 1 8351660 8361262 + MGP_NODShiLtJ_P0018670 Mcmdc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000507.1 MGP_NODShiLtJ_G0000443.1 mouse_genomes_project 1 83748963 83751849 + TEC TEC MGP_NODShiLtJ_T0016923.1 MGP_NODShiLtJ_G0014985.1 mouse_genomes_project 1 157594843 157596024 + Gm4258 processed_transcript retained_intron MGP_NODShiLtJ_T0016924.1 MGP_NODShiLtJ_G0014985.1 mouse_genomes_project 1 157594846 157728872 + Gm4258 processed_transcript lincRNA MGP_NODShiLtJ_T0098229.1 MGP_NODShiLtJ_G0036640.1 mouse_genomes_project 1 93070444 93071443 + Gm28941 sense_intronic sense_intronic MGP_NODShiLtJ_T0016872.1 MGP_NODShiLtJ_G0014967.1 mouse_genomes_project 1 48481016 48482655 + Gm28893 processed_transcript processed_transcript MGP_NODShiLtJ_T0019018.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 36970737 37384535 + MGP_NODShiLtJ_P0019018 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019019.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 36970784 37386290 + MGP_NODShiLtJ_P0019019 Dst protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019020.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37070693 37251444 + MGP_NODShiLtJ_P0019020 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019021.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37070695 37212033 + MGP_NODShiLtJ_P0019021 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019022.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37070939 37212034 + MGP_NODShiLtJ_P0019022 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019023.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37070993 37240545 + Dst protein_coding retained_intron MGP_NODShiLtJ_T0019024.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37076622 37385623 + MGP_NODShiLtJ_P0019024 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019025.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37076635 37385625 + MGP_NODShiLtJ_P0019025 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019026.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37076647 37385634 + MGP_NODShiLtJ_P0019026 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019027.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37160283 37191315 + Dst protein_coding retained_intron MGP_NODShiLtJ_T0019028.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37193794 37230207 + Dst protein_coding processed_transcript MGP_NODShiLtJ_T0019029.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37236146 37260548 + MGP_NODShiLtJ_P0019029 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019030.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37236146 37385377 + MGP_NODShiLtJ_P0019030 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019031.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37236146 37269948 + MGP_NODShiLtJ_P0019031 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019032.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37237734 37241246 + Dst protein_coding retained_intron MGP_NODShiLtJ_T0019033.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37255552 37259892 + Dst protein_coding retained_intron MGP_NODShiLtJ_T0019034.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37334801 37385377 + MGP_NODShiLtJ_P0019034 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019035.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37347518 37349239 + Dst protein_coding retained_intron MGP_NODShiLtJ_T0019036.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37370395 37380418 + MGP_NODShiLtJ_P0019036 Dst protein_coding protein_coding MGP_NODShiLtJ_T0019037.1 MGP_NODShiLtJ_G0015772.1 mouse_genomes_project 1 37371386 37383604 + MGP_NODShiLtJ_P0019037 Dst protein_coding protein_coding MGP_NODShiLtJ_T0024037.1 MGP_NODShiLtJ_G0016815.1 mouse_genomes_project 1 219234021 219283477 + MGP_NODShiLtJ_P0024037 Ints7 protein_coding protein_coding MGP_NODShiLtJ_T0024038.1 MGP_NODShiLtJ_G0016815.1 mouse_genomes_project 1 219234112 219269390 + Ints7 protein_coding retained_intron MGP_NODShiLtJ_T0024039.1 MGP_NODShiLtJ_G0016815.1 mouse_genomes_project 1 219234127 219281415 + MGP_NODShiLtJ_P0024039 Ints7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024040.1 MGP_NODShiLtJ_G0016815.1 mouse_genomes_project 1 219234147 219268006 + MGP_NODShiLtJ_P0024040 Ints7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024041.1 MGP_NODShiLtJ_G0016815.1 mouse_genomes_project 1 219234147 219282511 + MGP_NODShiLtJ_P0024041 Ints7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024042.1 MGP_NODShiLtJ_G0016815.1 mouse_genomes_project 1 219234161 219243111 + Ints7 protein_coding retained_intron MGP_NODShiLtJ_T0098501.1 MGP_NODShiLtJ_G0036895.1 mouse_genomes_project 1 233117 233227 + Gm26206 snRNA snRNA MGP_NODShiLtJ_T0099783.1 MGP_NODShiLtJ_G0038177.1 mouse_genomes_project 1 116216055 116216154 - Gm23036 snoRNA snoRNA MGP_NODShiLtJ_T0024133.1 MGP_NODShiLtJ_G0016831.1 mouse_genomes_project 1 220945911 220968601 - MGP_NODShiLtJ_P0024133 Hsd11b1 protein_coding protein_coding MGP_NODShiLtJ_T0024134.1 MGP_NODShiLtJ_G0016831.1 mouse_genomes_project 1 220945959 220967521 - MGP_NODShiLtJ_P0024134 Hsd11b1 protein_coding protein_coding MGP_NODShiLtJ_T0024135.1 MGP_NODShiLtJ_G0016831.1 mouse_genomes_project 1 220945966 220997219 - MGP_NODShiLtJ_P0024135 Hsd11b1 protein_coding protein_coding MGP_NODShiLtJ_T0024136.1 MGP_NODShiLtJ_G0016831.1 mouse_genomes_project 1 220947918 220969532 - MGP_NODShiLtJ_P0024136 Hsd11b1 protein_coding protein_coding MGP_NODShiLtJ_T0024137.1 MGP_NODShiLtJ_G0016831.1 mouse_genomes_project 1 220954462 220966323 - MGP_NODShiLtJ_P0024137 Hsd11b1 protein_coding protein_coding MGP_NODShiLtJ_T0024138.1 MGP_NODShiLtJ_G0016831.1 mouse_genomes_project 1 220962954 220964936 - Hsd11b1 protein_coding retained_intron MGP_NODShiLtJ_T0024139.1 MGP_NODShiLtJ_G0016831.1 mouse_genomes_project 1 220964182 220967347 - Hsd11b1 protein_coding processed_transcript MGP_NODShiLtJ_T0020354.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84061747 84070585 - MGP_NODShiLtJ_P0020354 Rnf25 protein_coding protein_coding MGP_NODShiLtJ_T0020355.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84061747 84070560 - MGP_NODShiLtJ_P0020355 Rnf25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020356.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84061752 84070565 - MGP_NODShiLtJ_P0020356 Rnf25 protein_coding protein_coding MGP_NODShiLtJ_T0020357.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84062221 84062801 - Rnf25 protein_coding retained_intron MGP_NODShiLtJ_T0020358.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84063208 84069752 - MGP_NODShiLtJ_P0020358 Rnf25 protein_coding protein_coding MGP_NODShiLtJ_T0020359.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84063884 84069787 - MGP_NODShiLtJ_P0020359 Rnf25 protein_coding protein_coding MGP_NODShiLtJ_T0020360.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84067552 84070533 - MGP_NODShiLtJ_P0020360 Rnf25 protein_coding protein_coding MGP_NODShiLtJ_T0020361.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84067739 84070582 - Rnf25 protein_coding retained_intron MGP_NODShiLtJ_T0020362.1 MGP_NODShiLtJ_G0016023.1 mouse_genomes_project 1 84067922 84070553 - MGP_NODShiLtJ_P0020362 Rnf25 protein_coding protein_coding MGP_NODShiLtJ_T0099778.1 MGP_NODShiLtJ_G0038172.1 mouse_genomes_project 1 106319730 106319799 - Gm23389 snoRNA snoRNA MGP_NODShiLtJ_T0005995.1 MGP_NODShiLtJ_G0005015.1 mouse_genomes_project 1 220531369 220532443 + 1700065J18Rik lincRNA lincRNA MGP_NODShiLtJ_T0005996.1 MGP_NODShiLtJ_G0005015.1 mouse_genomes_project 1 220531379 220532449 + 1700065J18Rik lincRNA lincRNA MGP_NODShiLtJ_T0000524.1 MGP_NODShiLtJ_G0000460.1 mouse_genomes_project 1 92392256 92395038 + TEC TEC MGP_NODShiLtJ_T0098525.1 MGP_NODShiLtJ_G0036919.1 mouse_genomes_project 1 64407856 64408013 + Gm24014 snRNA snRNA MGP_NODShiLtJ_T0021044.1 MGP_NODShiLtJ_G0016161.1 mouse_genomes_project 1 101276582 101346588 - MGP_NODShiLtJ_P0021044 Asb18 protein_coding protein_coding MGP_NODShiLtJ_T0021045.1 MGP_NODShiLtJ_G0016161.1 mouse_genomes_project 1 101280554 101346677 - MGP_NODShiLtJ_P0021045 Asb18 protein_coding protein_coding MGP_NODShiLtJ_T0021046.1 MGP_NODShiLtJ_G0016161.1 mouse_genomes_project 1 101280641 101346588 - MGP_NODShiLtJ_P0021046 Asb18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021047.1 MGP_NODShiLtJ_G0016161.1 mouse_genomes_project 1 101280642 101346588 - MGP_NODShiLtJ_P0021047 Asb18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022274.1 MGP_NODShiLtJ_G0016430.1 mouse_genomes_project 1 160265591 160266222 - protein_coding retained_intron MGP_NODShiLtJ_T0012043.1 MGP_NODShiLtJ_G0010151.1 mouse_genomes_project 1 115593003 115593239 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021576.1 MGP_NODShiLtJ_G0016279.1 mouse_genomes_project 1 138136689 138168789 - MGP_NODShiLtJ_P0021576 Marco protein_coding protein_coding MGP_NODShiLtJ_T0021577.1 MGP_NODShiLtJ_G0016279.1 mouse_genomes_project 1 138154687 138168521 - MGP_NODShiLtJ_P0021577 Marco protein_coding protein_coding MGP_NODShiLtJ_T0011794.1 MGP_NODShiLtJ_G0009902.1 mouse_genomes_project 1 18734434 18734546 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021385.1 MGP_NODShiLtJ_G0016235.1 mouse_genomes_project 1 113016889 113852123 + MGP_NODShiLtJ_P0021385 Cntnap5b protein_coding protein_coding MGP_NODShiLtJ_T0021386.1 MGP_NODShiLtJ_G0016235.1 mouse_genomes_project 1 113420511 113853216 + MGP_NODShiLtJ_P0021386 Cntnap5b protein_coding protein_coding MGP_NODShiLtJ_T0021387.1 MGP_NODShiLtJ_G0016235.1 mouse_genomes_project 1 113587137 113712177 + Cntnap5b protein_coding processed_transcript MGP_NODShiLtJ_T0000543.1 MGP_NODShiLtJ_G0000479.1 mouse_genomes_project 1 97797440 97798083 + TEC TEC MGP_NODShiLtJ_T0020331.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84009842 84035437 + MGP_NODShiLtJ_P0020331 Plcd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020332.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84009842 84035437 + MGP_NODShiLtJ_P0020332 Plcd4 protein_coding protein_coding MGP_NODShiLtJ_T0020333.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84009842 84035437 + MGP_NODShiLtJ_P0020333 Plcd4 protein_coding protein_coding MGP_NODShiLtJ_T0020334.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84009857 84028238 + Plcd4 protein_coding retained_intron MGP_NODShiLtJ_T0020335.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84009857 84033620 + MGP_NODShiLtJ_P0020335 Plcd4 protein_coding protein_coding MGP_NODShiLtJ_T0020336.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84009857 84033620 + MGP_NODShiLtJ_P0020336 Plcd4 protein_coding protein_coding MGP_NODShiLtJ_T0020337.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84011313 84013225 + Plcd4 protein_coding retained_intron MGP_NODShiLtJ_T0020338.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84011317 84033620 + MGP_NODShiLtJ_P0020338 Plcd4 protein_coding protein_coding MGP_NODShiLtJ_T0020339.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84011317 84033620 + MGP_NODShiLtJ_P0020339 Plcd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020340.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84028058 84032944 + Plcd4 protein_coding processed_transcript MGP_NODShiLtJ_T0020341.1 MGP_NODShiLtJ_G0016020.1 mouse_genomes_project 1 84032079 84033269 + Plcd4 protein_coding retained_intron MGP_NODShiLtJ_T0000692.1 MGP_NODShiLtJ_G0000626.1 mouse_genomes_project 1 184985177 184989931 - TEC TEC MGP_NODShiLtJ_T0005733.1 MGP_NODShiLtJ_G0004803.1 mouse_genomes_project 1 85506365 85508464 - Gm29065 lincRNA lincRNA MGP_NODShiLtJ_T0012120.1 MGP_NODShiLtJ_G0010228.1 mouse_genomes_project 1 151409619 151409976 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099740.1 MGP_NODShiLtJ_G0038134.1 mouse_genomes_project 1 18654620 18654692 - Gm24075 snoRNA snoRNA MGP_NODShiLtJ_T0019367.1 MGP_NODShiLtJ_G0015835.1 mouse_genomes_project 1 44140761 44180439 + MGP_NODShiLtJ_P0019367 Il18rap protein_coding protein_coding MGP_NODShiLtJ_T0019368.1 MGP_NODShiLtJ_G0015835.1 mouse_genomes_project 1 44140804 44167265 + Il18rap protein_coding retained_intron MGP_NODShiLtJ_T0019369.1 MGP_NODShiLtJ_G0015835.1 mouse_genomes_project 1 44140847 44153488 + Il18rap protein_coding retained_intron MGP_NODShiLtJ_T0019370.1 MGP_NODShiLtJ_G0015835.1 mouse_genomes_project 1 44169474 44176637 + Il18rap protein_coding retained_intron MGP_NODShiLtJ_T0000446.1 MGP_NODShiLtJ_G0000382.1 mouse_genomes_project 1 43633658 43637116 - TEC TEC MGP_NODShiLtJ_T0000387.1 MGP_NODShiLtJ_G0000325.1 mouse_genomes_project 1 16057782 16058609 + TEC TEC MGP_NODShiLtJ_T0099771.1 MGP_NODShiLtJ_G0038165.1 mouse_genomes_project 1 75422414 75422543 + Gm26342 snoRNA snoRNA MGP_NODShiLtJ_T0000508.1 MGP_NODShiLtJ_G0000444.1 mouse_genomes_project 1 83965091 83967962 - TEC TEC MGP_NODShiLtJ_T0101500.1 MGP_NODShiLtJ_G0039670.1 mouse_genomes_project 1 150945719 150946454 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0023228.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196751483 196757523 - MGP_NODShiLtJ_P0023228 Usp21 protein_coding protein_coding MGP_NODShiLtJ_T0023229.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196751487 196757456 - MGP_NODShiLtJ_P0023229 Usp21 protein_coding protein_coding MGP_NODShiLtJ_T0023230.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196751496 196752454 - Usp21 protein_coding retained_intron MGP_NODShiLtJ_T0023231.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196751496 196757487 - MGP_NODShiLtJ_P0023231 Usp21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023232.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196751496 196757493 - MGP_NODShiLtJ_P0023232 Usp21 protein_coding protein_coding MGP_NODShiLtJ_T0023233.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196751840 196752714 - Usp21 protein_coding retained_intron MGP_NODShiLtJ_T0023234.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196752346 196754119 - Usp21 protein_coding retained_intron MGP_NODShiLtJ_T0023235.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196752578 196753532 - Usp21 protein_coding retained_intron MGP_NODShiLtJ_T0023236.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196752952 196755146 - Usp21 protein_coding retained_intron MGP_NODShiLtJ_T0023237.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196753066 196756482 - Usp21 protein_coding retained_intron MGP_NODShiLtJ_T0023238.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196753994 196757491 - Usp21 protein_coding retained_intron MGP_NODShiLtJ_T0023239.1 MGP_NODShiLtJ_G0016622.1 mouse_genomes_project 1 196754463 196756338 - MGP_NODShiLtJ_P0023239 Usp21 protein_coding protein_coding MGP_NODShiLtJ_T0009390.1 MGP_NODShiLtJ_G0007523.1 mouse_genomes_project 1 39648114 39648191 - Mir6898 miRNA miRNA MGP_NODShiLtJ_T0020190.1 MGP_NODShiLtJ_G0015990.1 mouse_genomes_project 1 80189815 80268408 - MGP_NODShiLtJ_P0020190 Bard1 protein_coding protein_coding MGP_NODShiLtJ_T0020191.1 MGP_NODShiLtJ_G0015990.1 mouse_genomes_project 1 80194334 80268012 - MGP_NODShiLtJ_P0020191 Bard1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0002930.1 MGP_NODShiLtJ_G0002747.1 mouse_genomes_project 1 213951884 213953214 + Gm29491 antisense antisense MGP_NODShiLtJ_T0020761.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95253200 95397887 - MGP_NODShiLtJ_P0020761 Trip12 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020762.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95253201 95398969 - MGP_NODShiLtJ_P0020762 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0020763.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95253201 95368983 - MGP_NODShiLtJ_P0020763 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0020764.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95256277 95368983 - MGP_NODShiLtJ_P0020764 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0020765.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95256277 95288966 - MGP_NODShiLtJ_P0020765 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0020766.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95256590 95263716 - MGP_NODShiLtJ_P0020766 Trip12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020767.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95258223 95260893 - Trip12 protein_coding retained_intron MGP_NODShiLtJ_T0020768.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95260623 95263787 - Trip12 protein_coding retained_intron MGP_NODShiLtJ_T0020769.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95279528 95294087 - MGP_NODShiLtJ_P0020769 Trip12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020770.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95288846 95290232 - Trip12 protein_coding retained_intron MGP_NODShiLtJ_T0020771.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95288907 95368983 - MGP_NODShiLtJ_P0020771 Trip12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020772.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95294085 95368983 - MGP_NODShiLtJ_P0020772 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0020773.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95296332 95300517 - Trip12 protein_coding retained_intron MGP_NODShiLtJ_T0020774.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95306209 95306974 - Trip12 protein_coding retained_intron MGP_NODShiLtJ_T0020775.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95306245 95347006 - MGP_NODShiLtJ_P0020775 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0020776.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95335862 95337790 - Trip12 protein_coding retained_intron MGP_NODShiLtJ_T0020777.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95336328 95368983 - MGP_NODShiLtJ_P0020777 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0020778.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95347441 95398719 - MGP_NODShiLtJ_P0020778 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0020779.1 MGP_NODShiLtJ_G0016094.1 mouse_genomes_project 1 95347685 95397535 - MGP_NODShiLtJ_P0020779 Trip12 protein_coding protein_coding MGP_NODShiLtJ_T0005959.1 MGP_NODShiLtJ_G0004988.1 mouse_genomes_project 1 210937950 210938776 + Gm38108 lincRNA lincRNA MGP_NODShiLtJ_T0011970.1 MGP_NODShiLtJ_G0010078.1 mouse_genomes_project 1 75817158 75819142 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021760.1 MGP_NODShiLtJ_G0016319.1 mouse_genomes_project 1 149998547 150003675 + MGP_NODShiLtJ_P0021760 Il10 protein_coding protein_coding MGP_NODShiLtJ_T0098562.1 MGP_NODShiLtJ_G0036956.1 mouse_genomes_project 1 151198200 151198316 + Gm26034 snRNA snRNA MGP_NODShiLtJ_T0016926.1 MGP_NODShiLtJ_G0014987.1 mouse_genomes_project 1 173408029 173453254 - processed_transcript antisense MGP_NODShiLtJ_T0016927.1 MGP_NODShiLtJ_G0014987.1 mouse_genomes_project 1 173451617 173453400 - processed_transcript retained_intron MGP_NODShiLtJ_T0022776.1 MGP_NODShiLtJ_G0016519.1 mouse_genomes_project 1 185643473 185689375 - Klhl20 protein_coding retained_intron MGP_NODShiLtJ_T0022777.1 MGP_NODShiLtJ_G0016519.1 mouse_genomes_project 1 185643473 185689375 - MGP_NODShiLtJ_P0022777 Klhl20 protein_coding protein_coding MGP_NODShiLtJ_T0022778.1 MGP_NODShiLtJ_G0016519.1 mouse_genomes_project 1 185643478 185689292 - MGP_NODShiLtJ_P0022778 Klhl20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022779.1 MGP_NODShiLtJ_G0016519.1 mouse_genomes_project 1 185643496 185650723 - MGP_NODShiLtJ_P0022779 Klhl20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022780.1 MGP_NODShiLtJ_G0016519.1 mouse_genomes_project 1 185651543 185689375 - Klhl20 protein_coding retained_intron MGP_NODShiLtJ_T0022781.1 MGP_NODShiLtJ_G0016519.1 mouse_genomes_project 1 185656351 185660587 - Klhl20 protein_coding retained_intron MGP_NODShiLtJ_T0022782.1 MGP_NODShiLtJ_G0016519.1 mouse_genomes_project 1 185664233 185689306 - Klhl20 protein_coding retained_intron MGP_NODShiLtJ_T0022329.1 MGP_NODShiLtJ_G0016443.1 mouse_genomes_project 1 173117477 173229964 - MGP_NODShiLtJ_P0022329 Pla2g4a protein_coding protein_coding MGP_NODShiLtJ_T0022330.1 MGP_NODShiLtJ_G0016443.1 mouse_genomes_project 1 173117488 173216399 - MGP_NODShiLtJ_P0022330 Pla2g4a protein_coding protein_coding MGP_NODShiLtJ_T0022331.1 MGP_NODShiLtJ_G0016443.1 mouse_genomes_project 1 173177368 173271448 - MGP_NODShiLtJ_P0022331 Pla2g4a protein_coding protein_coding MGP_NODShiLtJ_T0022332.1 MGP_NODShiLtJ_G0016443.1 mouse_genomes_project 1 173177408 173194010 - Pla2g4a protein_coding processed_transcript MGP_NODShiLtJ_T0022333.1 MGP_NODShiLtJ_G0016443.1 mouse_genomes_project 1 173212838 173271474 - Pla2g4a protein_coding retained_intron MGP_NODShiLtJ_T0022334.1 MGP_NODShiLtJ_G0016443.1 mouse_genomes_project 1 173229741 173271445 - Pla2g4a protein_coding processed_transcript MGP_NODShiLtJ_T0002809.1 MGP_NODShiLtJ_G0002654.1 mouse_genomes_project 1 104414253 104416640 - 5033417F24Rik antisense antisense MGP_NODShiLtJ_T0021703.1 MGP_NODShiLtJ_G0016303.1 mouse_genomes_project 1 147236989 147241761 - MGP_NODShiLtJ_P0021703 Cxcr4 protein_coding protein_coding MGP_NODShiLtJ_T0021704.1 MGP_NODShiLtJ_G0016303.1 mouse_genomes_project 1 147238590 147241764 - MGP_NODShiLtJ_P0021704 Cxcr4 protein_coding protein_coding MGP_NODShiLtJ_T0000763.1 MGP_NODShiLtJ_G0000695.1 mouse_genomes_project 1 213548241 213549352 + TEC TEC MGP_NODShiLtJ_T0000769.1 MGP_NODShiLtJ_G0000701.1 mouse_genomes_project 1 215518962 215521399 + TEC TEC MGP_NODShiLtJ_T0022018.1 MGP_NODShiLtJ_G0016377.1 mouse_genomes_project 1 153724499 153729529 + MGP_NODShiLtJ_P0022018 4933406M09Rik protein_coding protein_coding MGP_NODShiLtJ_T0011963.1 MGP_NODShiLtJ_G0010071.1 mouse_genomes_project 1 73299444 73299752 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012026.1 MGP_NODShiLtJ_G0010134.1 mouse_genomes_project 1 104836893 104837439 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023576.1 MGP_NODShiLtJ_G0016720.1 mouse_genomes_project 1 204414916 204793613 + MGP_NODShiLtJ_P0023576 Desi2 protein_coding protein_coding MGP_NODShiLtJ_T0023577.1 MGP_NODShiLtJ_G0016720.1 mouse_genomes_project 1 204709941 204795176 + MGP_NODShiLtJ_P0023577 Desi2 protein_coding protein_coding MGP_NODShiLtJ_T0023578.1 MGP_NODShiLtJ_G0016720.1 mouse_genomes_project 1 204710056 204805557 + MGP_NODShiLtJ_P0023578 Desi2 protein_coding protein_coding MGP_NODShiLtJ_T0023579.1 MGP_NODShiLtJ_G0016720.1 mouse_genomes_project 1 204804358 204805551 + MGP_NODShiLtJ_P0023579 Desi2 protein_coding protein_coding MGP_NODShiLtJ_T0012111.1 MGP_NODShiLtJ_G0010219.1 mouse_genomes_project 1 146727740 146728220 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023466.1 MGP_NODShiLtJ_G0016687.1 mouse_genomes_project 1 199957094 199985829 - MGP_NODShiLtJ_P0023466 protein_coding protein_coding MGP_NODShiLtJ_T0011909.1 MGP_NODShiLtJ_G0010017.1 mouse_genomes_project 1 58469538 58470937 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021879.1 MGP_NODShiLtJ_G0016345.1 mouse_genomes_project 1 151612461 151643478 + MGP_NODShiLtJ_P0021879 Rbbp5 protein_coding protein_coding MGP_NODShiLtJ_T0021880.1 MGP_NODShiLtJ_G0016345.1 mouse_genomes_project 1 151612531 151644647 + MGP_NODShiLtJ_P0021880 Rbbp5 protein_coding protein_coding MGP_NODShiLtJ_T0021881.1 MGP_NODShiLtJ_G0016345.1 mouse_genomes_project 1 151612587 151627442 + MGP_NODShiLtJ_P0021881 Rbbp5 protein_coding protein_coding MGP_NODShiLtJ_T0021882.1 MGP_NODShiLtJ_G0016345.1 mouse_genomes_project 1 151612605 151642780 + MGP_NODShiLtJ_P0021882 Rbbp5 protein_coding protein_coding MGP_NODShiLtJ_T0021883.1 MGP_NODShiLtJ_G0016345.1 mouse_genomes_project 1 151612738 151627526 + MGP_NODShiLtJ_P0021883 Rbbp5 protein_coding protein_coding MGP_NODShiLtJ_T0021884.1 MGP_NODShiLtJ_G0016345.1 mouse_genomes_project 1 151642720 151644643 + Rbbp5 protein_coding retained_intron MGP_NODShiLtJ_T0009470.1 MGP_NODShiLtJ_G0007603.1 mouse_genomes_project 1 212361718 212361787 + Mir664 miRNA miRNA MGP_NODShiLtJ_T0005671.1 MGP_NODShiLtJ_G0004758.1 mouse_genomes_project 1 58771545 58782685 - Gm28178 lincRNA lincRNA MGP_NODShiLtJ_T0005920.1 MGP_NODShiLtJ_G0004955.1 mouse_genomes_project 1 190796772 190798074 - Gm36972 lincRNA lincRNA MGP_NODShiLtJ_T0009454.1 MGP_NODShiLtJ_G0007587.1 mouse_genomes_project 1 184667003 184667112 - Mir1927 miRNA miRNA MGP_NODShiLtJ_T0000447.1 MGP_NODShiLtJ_G0000383.1 mouse_genomes_project 1 43680531 43683598 + TEC TEC MGP_NODShiLtJ_T0005714.1 MGP_NODShiLtJ_G0004791.1 mouse_genomes_project 1 81122907 81148963 - Gm28818 lincRNA lincRNA MGP_NODShiLtJ_T0005715.1 MGP_NODShiLtJ_G0004791.1 mouse_genomes_project 1 81126938 81129126 - Gm28818 lincRNA lincRNA MGP_NODShiLtJ_T0018685.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8470054 8471410 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018686.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8470073 8479601 + MGP_NODShiLtJ_P0018686 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018687.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8470284 8586430 + MGP_NODShiLtJ_P0018687 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018688.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8470293 8494650 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018689.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8470316 8491925 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018690.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8470329 8500034 + MGP_NODShiLtJ_P0018690 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018691.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8471834 8491749 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018692.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8471840 8500595 + MGP_NODShiLtJ_P0018692 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018693.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8471840 8500803 + MGP_NODShiLtJ_P0018693 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018694.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8471844 8491735 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018695.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8471852 8500018 + MGP_NODShiLtJ_P0018695 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018696.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8471890 8492870 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018697.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8472222 8491700 + MGP_NODShiLtJ_P0018697 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018698.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8478559 8585807 + MGP_NODShiLtJ_P0018698 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018699.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8489800 8499491 + MGP_NODShiLtJ_P0018699 Cspp1 protein_coding protein_coding MGP_NODShiLtJ_T0018700.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8516951 8521958 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018701.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8520626 8530609 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018702.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8520679 8537601 + MGP_NODShiLtJ_P0018702 Cspp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018703.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8535092 8537663 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018704.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8543127 8555927 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018705.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8551600 8555916 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018706.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8560175 8582986 + MGP_NODShiLtJ_P0018706 Cspp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018707.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8562724 8563991 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018708.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8574750 8578831 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018709.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8578771 8582274 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0018710.1 MGP_NODShiLtJ_G0015701.1 mouse_genomes_project 1 8582782 8585984 + Cspp1 protein_coding retained_intron MGP_NODShiLtJ_T0011758.1 MGP_NODShiLtJ_G0009866.1 mouse_genomes_project 1 5620684 5621563 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002698.1 MGP_NODShiLtJ_G0002571.1 mouse_genomes_project 1 625838 677725 + Gm1992 antisense antisense MGP_NODShiLtJ_T0011874.1 MGP_NODShiLtJ_G0009982.1 mouse_genomes_project 1 48565786 48566095 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012226.1 MGP_NODShiLtJ_G0010334.1 mouse_genomes_project 1 207556479 207556957 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098473.1 MGP_NODShiLtJ_G0036872.1 mouse_genomes_project 1 23300534 23520163 - Gm29506 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0005878.1 MGP_NODShiLtJ_G0004924.1 mouse_genomes_project 1 175292399 175298469 - 2810414N06Rik lincRNA lincRNA MGP_NODShiLtJ_T0098534.1 MGP_NODShiLtJ_G0036928.1 mouse_genomes_project 1 78851464 78851590 - Gm23879 snRNA snRNA MGP_NODShiLtJ_T0021217.1 MGP_NODShiLtJ_G0016199.1 mouse_genomes_project 1 104440251 104453832 + MGP_NODShiLtJ_P0021217 Capn10 protein_coding protein_coding MGP_NODShiLtJ_T0021218.1 MGP_NODShiLtJ_G0016199.1 mouse_genomes_project 1 104440641 104446895 + MGP_NODShiLtJ_P0021218 Capn10 protein_coding protein_coding MGP_NODShiLtJ_T0021219.1 MGP_NODShiLtJ_G0016199.1 mouse_genomes_project 1 104440708 104453820 + MGP_NODShiLtJ_P0021219 Capn10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021220.1 MGP_NODShiLtJ_G0016199.1 mouse_genomes_project 1 104446381 104450994 + MGP_NODShiLtJ_P0021220 Capn10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021221.1 MGP_NODShiLtJ_G0016199.1 mouse_genomes_project 1 104448594 104449635 + Capn10 protein_coding retained_intron MGP_NODShiLtJ_T0021222.1 MGP_NODShiLtJ_G0016199.1 mouse_genomes_project 1 104452443 104452846 + Capn10 protein_coding processed_transcript MGP_NODShiLtJ_T0021223.1 MGP_NODShiLtJ_G0016199.1 mouse_genomes_project 1 104452775 104453481 + Capn10 protein_coding retained_intron MGP_NODShiLtJ_T0021895.1 MGP_NODShiLtJ_G0016348.1 mouse_genomes_project 1 151709564 151845992 - MGP_NODShiLtJ_P0021895 Nfasc protein_coding protein_coding MGP_NODShiLtJ_T0021896.1 MGP_NODShiLtJ_G0016348.1 mouse_genomes_project 1 151714908 151910210 - MGP_NODShiLtJ_P0021896 Nfasc protein_coding protein_coding MGP_NODShiLtJ_T0021897.1 MGP_NODShiLtJ_G0016348.1 mouse_genomes_project 1 151714997 151783435 - MGP_NODShiLtJ_P0021897 Nfasc protein_coding protein_coding MGP_NODShiLtJ_T0021898.1 MGP_NODShiLtJ_G0016348.1 mouse_genomes_project 1 151721692 151733720 - Nfasc protein_coding processed_transcript MGP_NODShiLtJ_T0021899.1 MGP_NODShiLtJ_G0016348.1 mouse_genomes_project 1 151746408 151910244 - MGP_NODShiLtJ_P0021899 Nfasc protein_coding protein_coding MGP_NODShiLtJ_T0021900.1 MGP_NODShiLtJ_G0016348.1 mouse_genomes_project 1 151748206 151751732 - Nfasc protein_coding retained_intron MGP_NODShiLtJ_T0021901.1 MGP_NODShiLtJ_G0016348.1 mouse_genomes_project 1 151765928 151771007 - Nfasc protein_coding retained_intron MGP_NODShiLtJ_T0021902.1 MGP_NODShiLtJ_G0016348.1 mouse_genomes_project 1 151830855 151910225 - Nfasc protein_coding processed_transcript MGP_NODShiLtJ_T0012122.1 MGP_NODShiLtJ_G0010230.1 mouse_genomes_project 1 153338523 153339461 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019765.1 MGP_NODShiLtJ_G0015914.1 mouse_genomes_project 1 65382828 65398774 + MGP_NODShiLtJ_P0019765 Bzw1 protein_coding protein_coding MGP_NODShiLtJ_T0019766.1 MGP_NODShiLtJ_G0015914.1 mouse_genomes_project 1 65382970 65398778 + MGP_NODShiLtJ_P0019766 Bzw1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019767.1 MGP_NODShiLtJ_G0015914.1 mouse_genomes_project 1 65382988 65392872 + MGP_NODShiLtJ_P0019767 Bzw1 protein_coding protein_coding MGP_NODShiLtJ_T0019768.1 MGP_NODShiLtJ_G0015914.1 mouse_genomes_project 1 65383334 65396548 + MGP_NODShiLtJ_P0019768 Bzw1 protein_coding protein_coding MGP_NODShiLtJ_T0023300.1 MGP_NODShiLtJ_G0016637.1 mouse_genomes_project 1 197167919 197181960 - MGP_NODShiLtJ_P0023300 Slamf7 protein_coding protein_coding MGP_NODShiLtJ_T0023301.1 MGP_NODShiLtJ_G0016637.1 mouse_genomes_project 1 197168713 197182040 - MGP_NODShiLtJ_P0023301 Slamf7 protein_coding protein_coding MGP_NODShiLtJ_T0023302.1 MGP_NODShiLtJ_G0016637.1 mouse_genomes_project 1 197169226 197181960 - MGP_NODShiLtJ_P0023302 Slamf7 protein_coding protein_coding MGP_NODShiLtJ_T0098219.1 MGP_NODShiLtJ_G0036631.1 mouse_genomes_project 1 41535862 41536873 - Gm37062 sense_intronic sense_intronic MGP_NODShiLtJ_T0011149.1 MGP_NODShiLtJ_G0009282.1 mouse_genomes_project 1 203091917 203092182 + Gm25288 misc_RNA misc_RNA MGP_NODShiLtJ_T0020162.1 MGP_NODShiLtJ_G0015985.1 mouse_genomes_project 1 75224411 75371007 + MGP_NODShiLtJ_P0020162 Cps1 protein_coding protein_coding MGP_NODShiLtJ_T0000688.1 MGP_NODShiLtJ_G0000622.1 mouse_genomes_project 1 183644694 183645100 - TEC TEC MGP_NODShiLtJ_T0099804.1 MGP_NODShiLtJ_G0038198.1 mouse_genomes_project 1 171046259 171046388 - Gm22966 snoRNA snoRNA MGP_NODShiLtJ_T0019814.1 MGP_NODShiLtJ_G0015921.1 mouse_genomes_project 1 65687566 65760663 - MGP_NODShiLtJ_P0019814 Als2cr12 protein_coding protein_coding MGP_NODShiLtJ_T0019815.1 MGP_NODShiLtJ_G0015921.1 mouse_genomes_project 1 65687566 65765902 - MGP_NODShiLtJ_P0019815 Als2cr12 protein_coding protein_coding MGP_NODShiLtJ_T0019816.1 MGP_NODShiLtJ_G0015921.1 mouse_genomes_project 1 65687809 65760663 - MGP_NODShiLtJ_P0019816 Als2cr12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019817.1 MGP_NODShiLtJ_G0015921.1 mouse_genomes_project 1 65722679 65753826 - Als2cr12 protein_coding retained_intron MGP_NODShiLtJ_T0101493.1 MGP_NODShiLtJ_G0039663.1 mouse_genomes_project 1 117358039 117436536 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002798.1 MGP_NODShiLtJ_G0002643.1 mouse_genomes_project 1 96948524 96978441 - Gm16341 antisense antisense MGP_NODShiLtJ_T0022323.1 MGP_NODShiLtJ_G0016441.1 mouse_genomes_project 1 166112398 166159739 - MGP_NODShiLtJ_P0022323 Rgs18 protein_coding protein_coding MGP_NODShiLtJ_T0012176.1 MGP_NODShiLtJ_G0010284.1 mouse_genomes_project 1 180134042 180134242 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018552.1 MGP_NODShiLtJ_G0015678.1 mouse_genomes_project 1 2186059 2198343 - MGP_NODShiLtJ_P0018552 Mrpl15 protein_coding protein_coding MGP_NODShiLtJ_T0018553.1 MGP_NODShiLtJ_G0015678.1 mouse_genomes_project 1 2186064 2198372 - MGP_NODShiLtJ_P0018553 Mrpl15 protein_coding protein_coding MGP_NODShiLtJ_T0018554.1 MGP_NODShiLtJ_G0015678.1 mouse_genomes_project 1 2187289 2198331 - MGP_NODShiLtJ_P0018554 Mrpl15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018555.1 MGP_NODShiLtJ_G0015678.1 mouse_genomes_project 1 2189230 2198372 - Mrpl15 protein_coding processed_transcript MGP_NODShiLtJ_T0018556.1 MGP_NODShiLtJ_G0015678.1 mouse_genomes_project 1 2192761 2197180 - Mrpl15 protein_coding retained_intron MGP_NODShiLtJ_T0018557.1 MGP_NODShiLtJ_G0015678.1 mouse_genomes_project 1 2194015 2198372 - MGP_NODShiLtJ_P0018557 Mrpl15 protein_coding protein_coding MGP_NODShiLtJ_T0018558.1 MGP_NODShiLtJ_G0015678.1 mouse_genomes_project 1 2196185 2198325 - Mrpl15 protein_coding retained_intron MGP_NODShiLtJ_T0021189.1 MGP_NODShiLtJ_G0016193.1 mouse_genomes_project 1 104128537 104131302 - protein_coding retained_intron MGP_NODShiLtJ_T0021190.1 MGP_NODShiLtJ_G0016193.1 mouse_genomes_project 1 104128537 104133316 - MGP_NODShiLtJ_P0021190 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021191.1 MGP_NODShiLtJ_G0016193.1 mouse_genomes_project 1 104128537 104133378 - MGP_NODShiLtJ_P0021191 protein_coding protein_coding MGP_NODShiLtJ_T0021192.1 MGP_NODShiLtJ_G0016193.1 mouse_genomes_project 1 104128537 104131957 - MGP_NODShiLtJ_P0021192 protein_coding protein_coding MGP_NODShiLtJ_T0021193.1 MGP_NODShiLtJ_G0016193.1 mouse_genomes_project 1 104130762 104133378 - protein_coding retained_intron MGP_NODShiLtJ_T0005587.1 MGP_NODShiLtJ_G0004699.1 mouse_genomes_project 1 8362264 8364425 - Snhg6 lincRNA lincRNA MGP_NODShiLtJ_T0005588.1 MGP_NODShiLtJ_G0004699.1 mouse_genomes_project 1 8362328 8363536 - Snhg6 lincRNA lincRNA MGP_NODShiLtJ_T0005589.1 MGP_NODShiLtJ_G0004699.1 mouse_genomes_project 1 8362330 8364410 - Snhg6 lincRNA lincRNA MGP_NODShiLtJ_T0005590.1 MGP_NODShiLtJ_G0004699.1 mouse_genomes_project 1 8362330 8364424 - Snhg6 lincRNA lincRNA MGP_NODShiLtJ_T0005591.1 MGP_NODShiLtJ_G0004699.1 mouse_genomes_project 1 8362330 8363210 - Snhg6 lincRNA lincRNA MGP_NODShiLtJ_T0020398.1 MGP_NODShiLtJ_G0016032.1 mouse_genomes_project 1 84377753 84382034 - MGP_NODShiLtJ_P0020398 Cryba2 protein_coding protein_coding MGP_NODShiLtJ_T0020399.1 MGP_NODShiLtJ_G0016032.1 mouse_genomes_project 1 84378350 84381783 - MGP_NODShiLtJ_P0020399 Cryba2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005987.1 MGP_NODShiLtJ_G0005008.1 mouse_genomes_project 1 218161914 218173308 + Gm30932 lincRNA lincRNA MGP_NODShiLtJ_T0098592.1 MGP_NODShiLtJ_G0036986.1 mouse_genomes_project 1 208760691 208760785 - Gm23690 snRNA snRNA MGP_NODShiLtJ_T0012032.1 MGP_NODShiLtJ_G0010140.1 mouse_genomes_project 1 111123672 111124656 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020622.1 MGP_NODShiLtJ_G0016064.1 mouse_genomes_project 1 88128846 88202063 - MGP_NODShiLtJ_P0020622 Farsb protein_coding protein_coding MGP_NODShiLtJ_T0020623.1 MGP_NODShiLtJ_G0016064.1 mouse_genomes_project 1 88135939 88202101 - MGP_NODShiLtJ_P0020623 Farsb protein_coding protein_coding MGP_NODShiLtJ_T0020624.1 MGP_NODShiLtJ_G0016064.1 mouse_genomes_project 1 88135956 88202066 - MGP_NODShiLtJ_P0020624 Farsb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020625.1 MGP_NODShiLtJ_G0016064.1 mouse_genomes_project 1 88175527 88202063 - MGP_NODShiLtJ_P0020625 Farsb protein_coding protein_coding MGP_NODShiLtJ_T0020626.1 MGP_NODShiLtJ_G0016064.1 mouse_genomes_project 1 88183717 88201999 - Farsb protein_coding processed_transcript MGP_NODShiLtJ_T0020627.1 MGP_NODShiLtJ_G0016064.1 mouse_genomes_project 1 88185101 88202046 - MGP_NODShiLtJ_P0020627 Farsb protein_coding protein_coding MGP_NODShiLtJ_T0020628.1 MGP_NODShiLtJ_G0016064.1 mouse_genomes_project 1 88191074 88202041 - Farsb protein_coding retained_intron MGP_NODShiLtJ_T0012203.1 MGP_NODShiLtJ_G0010311.1 mouse_genomes_project 1 192248011 192248420 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099797.1 MGP_NODShiLtJ_G0038191.1 mouse_genomes_project 1 152862640 152862773 + Gm23939 snoRNA snoRNA MGP_NODShiLtJ_T0005784.1 MGP_NODShiLtJ_G0004848.1 mouse_genomes_project 1 104257375 104258643 - Gm29482 lincRNA lincRNA MGP_NODShiLtJ_T0002857.1 MGP_NODShiLtJ_G0002689.1 mouse_genomes_project 1 160794803 160899318 - 4930590L20Rik antisense antisense MGP_NODShiLtJ_T0019920.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67336512 67400427 + MGP_NODShiLtJ_P0019920 Carf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019921.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67336529 67347966 + Carf protein_coding retained_intron MGP_NODShiLtJ_T0019922.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67336529 67372489 + MGP_NODShiLtJ_P0019922 Carf protein_coding protein_coding MGP_NODShiLtJ_T0019923.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67340123 67343394 + Carf protein_coding retained_intron MGP_NODShiLtJ_T0019924.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67340300 67400082 + MGP_NODShiLtJ_P0019924 Carf protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019925.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67347006 67400195 + MGP_NODShiLtJ_P0019925 Carf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019926.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67347006 67400195 + MGP_NODShiLtJ_P0019926 Carf protein_coding protein_coding MGP_NODShiLtJ_T0019927.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67387487 67389903 + Carf protein_coding retained_intron MGP_NODShiLtJ_T0019928.1 MGP_NODShiLtJ_G0015939.1 mouse_genomes_project 1 67389139 67397421 + MGP_NODShiLtJ_P0019928 Carf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019310.1 MGP_NODShiLtJ_G0015823.1 mouse_genomes_project 1 42903666 43018119 - MGP_NODShiLtJ_P0019310 Tbc1d8 protein_coding protein_coding MGP_NODShiLtJ_T0019311.1 MGP_NODShiLtJ_G0015823.1 mouse_genomes_project 1 42904041 42904608 - MGP_NODShiLtJ_P0019311 Tbc1d8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019312.1 MGP_NODShiLtJ_G0015823.1 mouse_genomes_project 1 42904470 43018025 - MGP_NODShiLtJ_P0019312 Tbc1d8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019313.1 MGP_NODShiLtJ_G0015823.1 mouse_genomes_project 1 42905490 43018064 - MGP_NODShiLtJ_P0019313 Tbc1d8 protein_coding protein_coding MGP_NODShiLtJ_T0019314.1 MGP_NODShiLtJ_G0015823.1 mouse_genomes_project 1 42923363 42924797 - Tbc1d8 protein_coding retained_intron MGP_NODShiLtJ_T0000783.1 MGP_NODShiLtJ_G0000714.1 mouse_genomes_project 1 222512099 222513933 + TEC TEC MGP_NODShiLtJ_T0009451.1 MGP_NODShiLtJ_G0007584.1 mouse_genomes_project 1 179185346 179185470 + Gm22569 miRNA miRNA MGP_NODShiLtJ_T0002936.1 MGP_NODShiLtJ_G0002753.1 mouse_genomes_project 1 216796381 216797847 + A430027H14Rik antisense antisense MGP_NODShiLtJ_T0002937.1 MGP_NODShiLtJ_G0002753.1 mouse_genomes_project 1 216796934 216797823 + A430027H14Rik antisense antisense MGP_NODShiLtJ_T0020537.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84808473 84867569 + MGP_NODShiLtJ_P0020537 Speg protein_coding protein_coding MGP_NODShiLtJ_T0020538.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84815282 84821532 + MGP_NODShiLtJ_P0020538 Speg protein_coding protein_coding MGP_NODShiLtJ_T0020539.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84815282 84838628 + MGP_NODShiLtJ_P0020539 Speg protein_coding protein_coding MGP_NODShiLtJ_T0020540.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84815294 84816551 + Speg protein_coding retained_intron MGP_NODShiLtJ_T0020541.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84815306 84821082 + MGP_NODShiLtJ_P0020541 Speg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020542.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84816724 84818137 + Speg protein_coding processed_transcript MGP_NODShiLtJ_T0020543.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84817861 84821135 + Speg protein_coding retained_intron MGP_NODShiLtJ_T0020544.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84817989 84825977 + MGP_NODShiLtJ_P0020544 Speg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020545.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84818674 84822291 + Speg protein_coding processed_transcript MGP_NODShiLtJ_T0020546.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84818772 84867553 + MGP_NODShiLtJ_P0020546 Speg protein_coding protein_coding MGP_NODShiLtJ_T0020547.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84834161 84838055 + MGP_NODShiLtJ_P0020547 Speg protein_coding protein_coding MGP_NODShiLtJ_T0020548.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84834597 84838435 + MGP_NODShiLtJ_P0020548 Speg protein_coding protein_coding MGP_NODShiLtJ_T0020549.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84834711 84838627 + MGP_NODShiLtJ_P0020549 Speg protein_coding protein_coding MGP_NODShiLtJ_T0020550.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84835086 84838272 + MGP_NODShiLtJ_P0020550 Speg protein_coding protein_coding MGP_NODShiLtJ_T0020551.1 MGP_NODShiLtJ_G0016052.1 mouse_genomes_project 1 84858959 84862872 + Speg protein_coding retained_intron MGP_NODShiLtJ_T0012129.1 MGP_NODShiLtJ_G0010237.1 mouse_genomes_project 1 156374724 156375373 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000494.1 MGP_NODShiLtJ_G0000430.1 mouse_genomes_project 1 74905375 74910146 - TEC TEC MGP_NODShiLtJ_T0020842.1 MGP_NODShiLtJ_G0016113.1 mouse_genomes_project 1 96803537 96833129 + MGP_NODShiLtJ_P0020842 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021743.1 MGP_NODShiLtJ_G0016314.1 mouse_genomes_project 1 149790795 149816312 + MGP_NODShiLtJ_P0021743 Pigr protein_coding protein_coding MGP_NODShiLtJ_T0021744.1 MGP_NODShiLtJ_G0016314.1 mouse_genomes_project 1 149790999 149808768 + MGP_NODShiLtJ_P0021744 Pigr protein_coding protein_coding MGP_NODShiLtJ_T0021745.1 MGP_NODShiLtJ_G0016314.1 mouse_genomes_project 1 149793121 149808736 + MGP_NODShiLtJ_P0021745 Pigr protein_coding protein_coding MGP_NODShiLtJ_T0098218.1 MGP_NODShiLtJ_G0036630.1 mouse_genomes_project 1 40258800 40261730 - Gm38115 sense_intronic sense_intronic MGP_NODShiLtJ_T0011888.1 MGP_NODShiLtJ_G0009996.1 mouse_genomes_project 1 51032015 51032673 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000718.1 MGP_NODShiLtJ_G0000652.1 mouse_genomes_project 1 193491869 193493569 - TEC TEC MGP_NODShiLtJ_T0000454.1 MGP_NODShiLtJ_G0000390.1 mouse_genomes_project 1 49830932 49837901 - TEC TEC MGP_NODShiLtJ_T0005911.1 MGP_NODShiLtJ_G0004949.1 mouse_genomes_project 1 189564488 189589913 - lincRNA lincRNA MGP_NODShiLtJ_T0011747.1 MGP_NODShiLtJ_G0009855.1 mouse_genomes_project 1 4679965 4680627 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022007.1 MGP_NODShiLtJ_G0016375.1 mouse_genomes_project 1 153629678 153666441 - MGP_NODShiLtJ_P0022007 Ppfia4 protein_coding protein_coding MGP_NODShiLtJ_T0022008.1 MGP_NODShiLtJ_G0016375.1 mouse_genomes_project 1 153629679 153680475 - MGP_NODShiLtJ_P0022008 Ppfia4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022009.1 MGP_NODShiLtJ_G0016375.1 mouse_genomes_project 1 153629679 153660785 - MGP_NODShiLtJ_P0022009 Ppfia4 protein_coding protein_coding MGP_NODShiLtJ_T0022010.1 MGP_NODShiLtJ_G0016375.1 mouse_genomes_project 1 153629680 153637752 - Ppfia4 protein_coding processed_transcript MGP_NODShiLtJ_T0022011.1 MGP_NODShiLtJ_G0016375.1 mouse_genomes_project 1 153629684 153637714 - Ppfia4 protein_coding retained_intron MGP_NODShiLtJ_T0022012.1 MGP_NODShiLtJ_G0016375.1 mouse_genomes_project 1 153631276 153645231 - Ppfia4 protein_coding retained_intron MGP_NODShiLtJ_T0098593.1 MGP_NODShiLtJ_G0036987.1 mouse_genomes_project 1 211643365 211643463 - Gm23349 snRNA snRNA MGP_NODShiLtJ_T0000640.1 MGP_NODShiLtJ_G0000574.1 mouse_genomes_project 1 157916833 157923015 - TEC TEC MGP_NODShiLtJ_T0023751.1 MGP_NODShiLtJ_G0016756.1 mouse_genomes_project 1 208677896 208693639 + protein_coding retained_intron MGP_NODShiLtJ_T0023752.1 MGP_NODShiLtJ_G0016756.1 mouse_genomes_project 1 208679944 208708905 + MGP_NODShiLtJ_P0023752 protein_coding protein_coding MGP_NODShiLtJ_T0023753.1 MGP_NODShiLtJ_G0016756.1 mouse_genomes_project 1 208681648 208685683 + protein_coding processed_transcript MGP_NODShiLtJ_T0005767.1 MGP_NODShiLtJ_G0004831.1 mouse_genomes_project 1 100300682 100306922 + 1700067G17Rik lincRNA lincRNA MGP_NODShiLtJ_T0023473.1 MGP_NODShiLtJ_G0016692.1 mouse_genomes_project 1 200083802 200084750 + MGP_NODShiLtJ_P0023473 Olfr427 protein_coding protein_coding MGP_NODShiLtJ_T0012253.1 MGP_NODShiLtJ_G0010361.1 mouse_genomes_project 1 220509427 220509881 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023502.1 MGP_NODShiLtJ_G0016706.1 mouse_genomes_project 1 201793210 201820942 - MGP_NODShiLtJ_P0023502 Fh1 protein_coding protein_coding MGP_NODShiLtJ_T0023503.1 MGP_NODShiLtJ_G0016706.1 mouse_genomes_project 1 201794212 201797118 - Fh1 protein_coding retained_intron MGP_NODShiLtJ_T0023504.1 MGP_NODShiLtJ_G0016706.1 mouse_genomes_project 1 201794214 201799480 - Fh1 protein_coding retained_intron MGP_NODShiLtJ_T0023505.1 MGP_NODShiLtJ_G0016706.1 mouse_genomes_project 1 201794220 201802547 - MGP_NODShiLtJ_P0023505 Fh1 protein_coding protein_coding MGP_NODShiLtJ_T0023506.1 MGP_NODShiLtJ_G0016706.1 mouse_genomes_project 1 201810084 201820880 - MGP_NODShiLtJ_P0023506 Fh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011681.1 MGP_NODShiLtJ_G0009812.1 mouse_genomes_project 1 200160783 200161833 + MGP_NODShiLtJ_P0011681 Olfr421-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0000773.1 MGP_NODShiLtJ_G0000705.1 mouse_genomes_project 1 218880939 218882786 + TEC TEC MGP_NODShiLtJ_T0097874.1 MGP_NODShiLtJ_G0036286.1 mouse_genomes_project 1 190807750 190807868 - Gm24808 rRNA rRNA MGP_NODShiLtJ_T0023799.1 MGP_NODShiLtJ_G0016765.1 mouse_genomes_project 1 209551358 209601991 + Capn8 protein_coding processed_transcript MGP_NODShiLtJ_T0023800.1 MGP_NODShiLtJ_G0016765.1 mouse_genomes_project 1 209551363 209627755 + MGP_NODShiLtJ_P0023800 Capn8 protein_coding protein_coding MGP_NODShiLtJ_T0023801.1 MGP_NODShiLtJ_G0016765.1 mouse_genomes_project 1 209551389 209627643 + MGP_NODShiLtJ_P0023801 Capn8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023802.1 MGP_NODShiLtJ_G0016765.1 mouse_genomes_project 1 209551412 209632755 + MGP_NODShiLtJ_P0023802 Capn8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019067.1 MGP_NODShiLtJ_G0015781.1 mouse_genomes_project 1 37949779 37981574 - MGP_NODShiLtJ_P0019067 Fam168b protein_coding protein_coding MGP_NODShiLtJ_T0019068.1 MGP_NODShiLtJ_G0015781.1 mouse_genomes_project 1 37949786 37981589 - MGP_NODShiLtJ_P0019068 Fam168b protein_coding protein_coding MGP_NODShiLtJ_T0019069.1 MGP_NODShiLtJ_G0015781.1 mouse_genomes_project 1 37953797 37981488 - MGP_NODShiLtJ_P0019069 Fam168b protein_coding protein_coding MGP_NODShiLtJ_T0019070.1 MGP_NODShiLtJ_G0015781.1 mouse_genomes_project 1 37953914 37981509 - MGP_NODShiLtJ_P0019070 Fam168b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019071.1 MGP_NODShiLtJ_G0015781.1 mouse_genomes_project 1 37954571 37981558 - MGP_NODShiLtJ_P0019071 Fam168b protein_coding protein_coding MGP_NODShiLtJ_T0019072.1 MGP_NODShiLtJ_G0015781.1 mouse_genomes_project 1 37956174 37981537 - Fam168b protein_coding processed_transcript MGP_NODShiLtJ_T0019073.1 MGP_NODShiLtJ_G0015781.1 mouse_genomes_project 1 37956261 37981528 - MGP_NODShiLtJ_P0019073 Fam168b protein_coding protein_coding MGP_NODShiLtJ_T0019074.1 MGP_NODShiLtJ_G0015781.1 mouse_genomes_project 1 37965244 37981589 - Fam168b protein_coding retained_intron MGP_NODShiLtJ_T0018868.1 MGP_NODShiLtJ_G0015736.1 mouse_genomes_project 1 20611817 20616334 + MGP_NODShiLtJ_P0018868 Il17a protein_coding protein_coding MGP_NODShiLtJ_T0011864.1 MGP_NODShiLtJ_G0009972.1 mouse_genomes_project 1 44534550 44535046 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000414.1 MGP_NODShiLtJ_G0000351.1 mouse_genomes_project 1 26497532 26498754 + TEC TEC MGP_NODShiLtJ_T0005976.1 MGP_NODShiLtJ_G0004999.1 mouse_genomes_project 1 212896976 212915693 + Gm38093 lincRNA lincRNA MGP_NODShiLtJ_T0019383.1 MGP_NODShiLtJ_G0015841.1 mouse_genomes_project 1 46796509 46855621 + MGP_NODShiLtJ_P0019383 Mrps9 protein_coding protein_coding MGP_NODShiLtJ_T0019384.1 MGP_NODShiLtJ_G0015841.1 mouse_genomes_project 1 46796511 46849611 + Mrps9 protein_coding processed_transcript MGP_NODShiLtJ_T0019385.1 MGP_NODShiLtJ_G0015841.1 mouse_genomes_project 1 46796511 46851945 + Mrps9 protein_coding processed_transcript MGP_NODShiLtJ_T0019386.1 MGP_NODShiLtJ_G0015841.1 mouse_genomes_project 1 46796520 46832039 + Mrps9 protein_coding retained_intron MGP_NODShiLtJ_T0019387.1 MGP_NODShiLtJ_G0015841.1 mouse_genomes_project 1 46808550 46849060 + Mrps9 protein_coding retained_intron MGP_NODShiLtJ_T0019388.1 MGP_NODShiLtJ_G0015841.1 mouse_genomes_project 1 46837663 46855615 + MGP_NODShiLtJ_P0019388 Mrps9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019389.1 MGP_NODShiLtJ_G0015841.1 mouse_genomes_project 1 46852988 46855615 + Mrps9 protein_coding retained_intron MGP_NODShiLtJ_T0009432.1 MGP_NODShiLtJ_G0007565.1 mouse_genomes_project 1 111465524 111465634 + Gm26134 miRNA miRNA MGP_NODShiLtJ_T0002790.1 MGP_NODShiLtJ_G0002636.1 mouse_genomes_project 1 84704033 84707081 + Gm28902 antisense antisense MGP_NODShiLtJ_T0009469.1 MGP_NODShiLtJ_G0007602.1 mouse_genomes_project 1 211913180 211913262 - Mir1981 miRNA miRNA MGP_NODShiLtJ_T0002867.1 MGP_NODShiLtJ_G0002695.1 mouse_genomes_project 1 175419238 175431841 + Gm28610 antisense antisense MGP_NODShiLtJ_T0023400.1 MGP_NODShiLtJ_G0016659.1 mouse_genomes_project 1 198075682 198081589 + Tagln2 protein_coding retained_intron MGP_NODShiLtJ_T0023401.1 MGP_NODShiLtJ_G0016659.1 mouse_genomes_project 1 198075682 198083033 + MGP_NODShiLtJ_P0023401 Tagln2 protein_coding protein_coding MGP_NODShiLtJ_T0023402.1 MGP_NODShiLtJ_G0016659.1 mouse_genomes_project 1 198075880 198081507 + MGP_NODShiLtJ_P0023402 Tagln2 protein_coding protein_coding MGP_NODShiLtJ_T0023403.1 MGP_NODShiLtJ_G0016659.1 mouse_genomes_project 1 198076904 198082408 + MGP_NODShiLtJ_P0023403 Tagln2 protein_coding protein_coding MGP_NODShiLtJ_T0101474.1 MGP_NODShiLtJ_G0039644.1 mouse_genomes_project 1 73248478 73248646 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000656.1 MGP_NODShiLtJ_G0000590.1 mouse_genomes_project 1 169614546 169615801 - TEC TEC MGP_NODShiLtJ_T0022433.1 MGP_NODShiLtJ_G0016461.1 mouse_genomes_project 1 176370686 176380873 + MGP_NODShiLtJ_P0022433 Arpc5 protein_coding protein_coding MGP_NODShiLtJ_T0022434.1 MGP_NODShiLtJ_G0016461.1 mouse_genomes_project 1 176372662 176378560 + Arpc5 protein_coding retained_intron MGP_NODShiLtJ_T0005610.1 MGP_NODShiLtJ_G0004717.1 mouse_genomes_project 1 33165270 33166674 - Gm9898 lincRNA lincRNA MGP_NODShiLtJ_T0012099.1 MGP_NODShiLtJ_G0010207.1 mouse_genomes_project 1 139761399 139762708 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099825.1 MGP_NODShiLtJ_G0038219.1 mouse_genomes_project 1 198551316 198551439 - Gm26077 snoRNA snoRNA MGP_NODShiLtJ_T0005842.1 MGP_NODShiLtJ_G0004894.1 mouse_genomes_project 1 151398961 151405578 - Gm29630 lincRNA lincRNA MGP_NODShiLtJ_T0098510.1 MGP_NODShiLtJ_G0036904.1 mouse_genomes_project 1 12176661 12176773 - Gm23169 snRNA snRNA MGP_NODShiLtJ_T0011838.1 MGP_NODShiLtJ_G0009946.1 mouse_genomes_project 1 36687828 36688156 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000786.1 MGP_NODShiLtJ_G0000717.1 mouse_genomes_project 1 222597330 222597862 + TEC TEC MGP_NODShiLtJ_T0021919.1 MGP_NODShiLtJ_G0016351.1 mouse_genomes_project 1 152233254 152254811 + MGP_NODShiLtJ_P0021919 Pik3c2b protein_coding protein_coding MGP_NODShiLtJ_T0021920.1 MGP_NODShiLtJ_G0016351.1 mouse_genomes_project 1 152233593 152255619 + Pik3c2b protein_coding retained_intron MGP_NODShiLtJ_T0021921.1 MGP_NODShiLtJ_G0016351.1 mouse_genomes_project 1 152233593 152270907 + Pik3c2b protein_coding retained_intron MGP_NODShiLtJ_T0021922.1 MGP_NODShiLtJ_G0016351.1 mouse_genomes_project 1 152233593 152298406 + MGP_NODShiLtJ_P0021922 Pik3c2b protein_coding protein_coding MGP_NODShiLtJ_T0023620.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206458332 206526119 - MGP_NODShiLtJ_P0023620 Ahctf1 protein_coding protein_coding MGP_NODShiLtJ_T0023621.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206458775 206465848 - MGP_NODShiLtJ_P0023621 Ahctf1 protein_coding protein_coding MGP_NODShiLtJ_T0023622.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206459529 206467019 - Ahctf1 protein_coding retained_intron MGP_NODShiLtJ_T0023623.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206467137 206478702 - MGP_NODShiLtJ_P0023623 Ahctf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023624.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206480975 206486620 - MGP_NODShiLtJ_P0023624 Ahctf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023625.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206489007 206491631 - MGP_NODShiLtJ_P0023625 Ahctf1 protein_coding protein_coding MGP_NODShiLtJ_T0023626.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206515431 206518593 - Ahctf1 protein_coding retained_intron MGP_NODShiLtJ_T0023627.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206521286 206524511 - Ahctf1 protein_coding retained_intron MGP_NODShiLtJ_T0023628.1 MGP_NODShiLtJ_G0016732.1 mouse_genomes_project 1 206521292 206526045 - Ahctf1 protein_coding retained_intron MGP_NODShiLtJ_T0020129.1 MGP_NODShiLtJ_G0015979.1 mouse_genomes_project 1 74507681 74759756 + MGP_NODShiLtJ_P0020129 protein_coding protein_coding MGP_NODShiLtJ_T0020130.1 MGP_NODShiLtJ_G0015979.1 mouse_genomes_project 1 74507728 74556973 + MGP_NODShiLtJ_P0020130 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020131.1 MGP_NODShiLtJ_G0015979.1 mouse_genomes_project 1 74507744 74538028 + protein_coding retained_intron MGP_NODShiLtJ_T0020132.1 MGP_NODShiLtJ_G0015979.1 mouse_genomes_project 1 74507761 74759040 + MGP_NODShiLtJ_P0020132 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020133.1 MGP_NODShiLtJ_G0015979.1 mouse_genomes_project 1 74733205 74733783 + protein_coding retained_intron MGP_NODShiLtJ_T0020134.1 MGP_NODShiLtJ_G0015979.1 mouse_genomes_project 1 74739136 74756535 + MGP_NODShiLtJ_P0020134 protein_coding protein_coding MGP_NODShiLtJ_T0019752.1 MGP_NODShiLtJ_G0015911.1 mouse_genomes_project 1 65085012 65086891 + Aox3 protein_coding retained_intron MGP_NODShiLtJ_T0019753.1 MGP_NODShiLtJ_G0015911.1 mouse_genomes_project 1 65085018 65177108 + MGP_NODShiLtJ_P0019753 Aox3 protein_coding protein_coding MGP_NODShiLtJ_T0019754.1 MGP_NODShiLtJ_G0015911.1 mouse_genomes_project 1 65085020 65094279 + Aox3 protein_coding retained_intron MGP_NODShiLtJ_T0019755.1 MGP_NODShiLtJ_G0015911.1 mouse_genomes_project 1 65085068 65113435 + MGP_NODShiLtJ_P0019755 Aox3 protein_coding protein_coding MGP_NODShiLtJ_T0019756.1 MGP_NODShiLtJ_G0015911.1 mouse_genomes_project 1 65085141 65176633 + MGP_NODShiLtJ_P0019756 Aox3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019757.1 MGP_NODShiLtJ_G0015911.1 mouse_genomes_project 1 65146276 65148900 + Aox3 protein_coding retained_intron MGP_NODShiLtJ_T0097861.1 MGP_NODShiLtJ_G0036273.1 mouse_genomes_project 1 93596288 93596409 - n-R5s214 rRNA rRNA MGP_NODShiLtJ_T0023562.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203803402 203807283 + MGP_NODShiLtJ_P0023562 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0023563.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203803410 203807332 + MGP_NODShiLtJ_P0023563 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0023564.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203804481 203811980 + MGP_NODShiLtJ_P0023564 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0023565.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203804835 203807975 + MGP_NODShiLtJ_P0023565 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0023566.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203804839 203811980 + MGP_NODShiLtJ_P0023566 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0023567.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203804847 203807773 + MGP_NODShiLtJ_P0023567 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0023568.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203804923 203807705 + MGP_NODShiLtJ_P0023568 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0023569.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203805124 203811976 + MGP_NODShiLtJ_P0023569 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0023570.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203805817 203806692 + Zbtb18 protein_coding processed_transcript MGP_NODShiLtJ_T0023571.1 MGP_NODShiLtJ_G0016717.1 mouse_genomes_project 1 203806007 203811980 + MGP_NODShiLtJ_P0023571 Zbtb18 protein_coding protein_coding MGP_NODShiLtJ_T0005744.1 MGP_NODShiLtJ_G0004813.1 mouse_genomes_project 1 90079501 90088079 + 9830004L10Rik lincRNA lincRNA MGP_NODShiLtJ_T0005745.1 MGP_NODShiLtJ_G0004813.1 mouse_genomes_project 1 90083008 90088079 + 9830004L10Rik lincRNA lincRNA MGP_NODShiLtJ_T0005746.1 MGP_NODShiLtJ_G0004813.1 mouse_genomes_project 1 90083030 90088124 + 9830004L10Rik lincRNA lincRNA MGP_NODShiLtJ_T0011914.1 MGP_NODShiLtJ_G0010022.1 mouse_genomes_project 1 59671208 59671531 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020731.1 MGP_NODShiLtJ_G0016087.1 mouse_genomes_project 1 93367765 93393654 - MGP_NODShiLtJ_P0020731 Slc19a3 protein_coding protein_coding MGP_NODShiLtJ_T0020732.1 MGP_NODShiLtJ_G0016087.1 mouse_genomes_project 1 93367766 93375428 - Slc19a3 protein_coding processed_transcript MGP_NODShiLtJ_T0020733.1 MGP_NODShiLtJ_G0016087.1 mouse_genomes_project 1 93369042 93393637 - MGP_NODShiLtJ_P0020733 Slc19a3 protein_coding protein_coding MGP_NODShiLtJ_T0021230.1 MGP_NODShiLtJ_G0016201.1 mouse_genomes_project 1 104518140 104527897 + MGP_NODShiLtJ_P0021230 Aqp12 protein_coding protein_coding MGP_NODShiLtJ_T0000532.1 MGP_NODShiLtJ_G0000468.1 mouse_genomes_project 1 95195084 95200470 - TEC TEC MGP_NODShiLtJ_T0005582.1 MGP_NODShiLtJ_G0004695.1 mouse_genomes_project 1 1970163 1973288 - Gm37323 lincRNA lincRNA MGP_NODShiLtJ_T0000710.1 MGP_NODShiLtJ_G0000644.1 mouse_genomes_project 1 189494426 189497525 + TEC TEC MGP_NODShiLtJ_T0012191.1 MGP_NODShiLtJ_G0010299.1 mouse_genomes_project 1 188542980 188544022 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005654.1 MGP_NODShiLtJ_G0004744.1 mouse_genomes_project 1 46679537 46681707 + Dalir lincRNA lincRNA MGP_NODShiLtJ_T0019846.1 MGP_NODShiLtJ_G0015926.1 mouse_genomes_project 1 66178881 66229091 - MGP_NODShiLtJ_P0019846 Als2cr11 protein_coding protein_coding MGP_NODShiLtJ_T0019847.1 MGP_NODShiLtJ_G0015926.1 mouse_genomes_project 1 66200962 66217819 - Als2cr11 protein_coding processed_transcript MGP_NODShiLtJ_T0005680.1 MGP_NODShiLtJ_G0004765.1 mouse_genomes_project 1 65507099 65514569 + Gm15834 lincRNA lincRNA MGP_NODShiLtJ_T0005681.1 MGP_NODShiLtJ_G0004765.1 mouse_genomes_project 1 65507103 65521669 + Gm15834 lincRNA lincRNA MGP_NODShiLtJ_T0005682.1 MGP_NODShiLtJ_G0004765.1 mouse_genomes_project 1 65507106 65527367 + Gm15834 lincRNA lincRNA MGP_NODShiLtJ_T0000679.1 MGP_NODShiLtJ_G0000613.1 mouse_genomes_project 1 180832601 180837478 - TEC TEC MGP_NODShiLtJ_T0011925.1 MGP_NODShiLtJ_G0010033.1 mouse_genomes_project 1 64318389 64320461 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000586.1 MGP_NODShiLtJ_G0000522.1 mouse_genomes_project 1 141569155 141570650 - TEC TEC MGP_NODShiLtJ_T0012050.1 MGP_NODShiLtJ_G0010158.1 mouse_genomes_project 1 120066685 120066960 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002911.1 MGP_NODShiLtJ_G0002731.1 mouse_genomes_project 1 197888433 197889101 + Gm36937 antisense antisense MGP_NODShiLtJ_T0000404.1 MGP_NODShiLtJ_G0000341.1 mouse_genomes_project 1 26213561 26216407 - TEC TEC MGP_NODShiLtJ_T0012198.1 MGP_NODShiLtJ_G0010306.1 mouse_genomes_project 1 190967336 190969245 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022381.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174883892 174951611 - MGP_NODShiLtJ_P0022381 Swt1 protein_coding protein_coding MGP_NODShiLtJ_T0022382.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174884555 174951592 - MGP_NODShiLtJ_P0022382 Swt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022383.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174886619 174889695 - Swt1 protein_coding retained_intron MGP_NODShiLtJ_T0022384.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174897699 174903815 - Swt1 protein_coding retained_intron MGP_NODShiLtJ_T0022385.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174912195 174924130 - MGP_NODShiLtJ_P0022385 Swt1 protein_coding protein_coding MGP_NODShiLtJ_T0022386.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174922226 174946699 - MGP_NODShiLtJ_P0022386 Swt1 protein_coding protein_coding MGP_NODShiLtJ_T0022387.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174922859 174926853 - Swt1 protein_coding retained_intron MGP_NODShiLtJ_T0022388.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174934119 174935942 - Swt1 protein_coding retained_intron MGP_NODShiLtJ_T0022389.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174939277 174946488 - Swt1 protein_coding retained_intron MGP_NODShiLtJ_T0022390.1 MGP_NODShiLtJ_G0016451.1 mouse_genomes_project 1 174950181 174951611 - Swt1 protein_coding retained_intron MGP_NODShiLtJ_T0011950.1 MGP_NODShiLtJ_G0010058.1 mouse_genomes_project 1 69589776 69590035 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024104.1 MGP_NODShiLtJ_G0016827.1 mouse_genomes_project 1 220876874 220895784 + MGP_NODShiLtJ_P0024104 Irf6 protein_coding protein_coding MGP_NODShiLtJ_T0024105.1 MGP_NODShiLtJ_G0016827.1 mouse_genomes_project 1 220876917 220890629 + Irf6 protein_coding retained_intron MGP_NODShiLtJ_T0024106.1 MGP_NODShiLtJ_G0016827.1 mouse_genomes_project 1 220880428 220887941 + Irf6 protein_coding retained_intron MGP_NODShiLtJ_T0024108.1 MGP_NODShiLtJ_G0016827.1 mouse_genomes_project 1 220892263 220893250 + Irf6 protein_coding retained_intron MGP_NODShiLtJ_T0005605.1 MGP_NODShiLtJ_G0004713.1 mouse_genomes_project 1 23903443 23927494 + Gm28822 lincRNA lincRNA MGP_NODShiLtJ_T0005977.1 MGP_NODShiLtJ_G0005000.1 mouse_genomes_project 1 213354532 213405766 + Gm37134 lincRNA lincRNA MGP_NODShiLtJ_T0023972.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218277089 218509514 - MGP_NODShiLtJ_P0023972 Rps6kc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023973.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218352370 218415315 - MGP_NODShiLtJ_P0023973 Rps6kc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023974.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218352370 218509537 - MGP_NODShiLtJ_P0023974 Rps6kc1 protein_coding protein_coding MGP_NODShiLtJ_T0023975.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218352370 218509505 - MGP_NODShiLtJ_P0023975 Rps6kc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023976.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218375652 218428292 - Rps6kc1 protein_coding retained_intron MGP_NODShiLtJ_T0023977.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218378031 218509501 - Rps6kc1 protein_coding retained_intron MGP_NODShiLtJ_T0023978.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218390169 218391745 - Rps6kc1 protein_coding retained_intron MGP_NODShiLtJ_T0023979.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218463854 218494822 - Rps6kc1 protein_coding processed_transcript MGP_NODShiLtJ_T0023980.1 MGP_NODShiLtJ_G0016801.1 mouse_genomes_project 1 218478241 218509536 - MGP_NODShiLtJ_P0023980 Rps6kc1 protein_coding protein_coding MGP_NODShiLtJ_T0101022.1 MGP_NODShiLtJ_G0039403.1 mouse_genomes_project 1 209528431 209529365 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101023.1 MGP_NODShiLtJ_G0039403.1 mouse_genomes_project 1 209528853 209539895 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0099802.1 MGP_NODShiLtJ_G0038196.1 mouse_genomes_project 1 164999480 164999615 + Gm25663 snoRNA snoRNA MGP_NODShiLtJ_T0005619.1 MGP_NODShiLtJ_G0004725.1 mouse_genomes_project 1 39058045 39060875 + Gm28415 lincRNA lincRNA MGP_NODShiLtJ_T0011903.1 MGP_NODShiLtJ_G0010011.1 mouse_genomes_project 1 56009629 56010382 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099784.1 MGP_NODShiLtJ_G0038178.1 mouse_genomes_project 1 116880450 116880584 - Gm22034 snoRNA snoRNA MGP_NODShiLtJ_T0000731.1 MGP_NODShiLtJ_G0000665.1 mouse_genomes_project 1 203190868 203191591 + TEC TEC MGP_NODShiLtJ_T0002890.1 MGP_NODShiLtJ_G0002714.1 mouse_genomes_project 1 189010017 189012888 - Gm16587 antisense antisense MGP_NODShiLtJ_T0023109.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195448314 195488552 - MGP_NODShiLtJ_P0023109 Uap1 protein_coding protein_coding MGP_NODShiLtJ_T0023110.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195448379 195488541 - MGP_NODShiLtJ_P0023110 Uap1 protein_coding protein_coding MGP_NODShiLtJ_T0023111.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195448380 195488541 - MGP_NODShiLtJ_P0023111 Uap1 protein_coding protein_coding MGP_NODShiLtJ_T0023112.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195448411 195450091 - Uap1 protein_coding retained_intron MGP_NODShiLtJ_T0023113.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195455996 195488387 - Uap1 protein_coding retained_intron MGP_NODShiLtJ_T0023114.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195472600 195473176 - Uap1 protein_coding processed_transcript MGP_NODShiLtJ_T0023115.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195472618 195488361 - Uap1 protein_coding processed_transcript MGP_NODShiLtJ_T0023116.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195477545 195488384 - Uap1 protein_coding retained_intron MGP_NODShiLtJ_T0023117.1 MGP_NODShiLtJ_G0016594.1 mouse_genomes_project 1 195482600 195488481 - Uap1 protein_coding processed_transcript MGP_NODShiLtJ_T0019298.1 MGP_NODShiLtJ_G0015820.1 mouse_genomes_project 1 42492274 42499069 + MGP_NODShiLtJ_P0019298 Pdcl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019299.1 MGP_NODShiLtJ_G0015820.1 mouse_genomes_project 1 42492277 42500435 + MGP_NODShiLtJ_P0019299 Pdcl3 protein_coding protein_coding MGP_NODShiLtJ_T0019300.1 MGP_NODShiLtJ_G0015820.1 mouse_genomes_project 1 42499311 42500798 + Pdcl3 protein_coding retained_intron MGP_NODShiLtJ_T0020866.1 MGP_NODShiLtJ_G0016118.1 mouse_genomes_project 1 97121419 97123143 + MGP_NODShiLtJ_P0020866 1700019O17Rik protein_coding protein_coding MGP_NODShiLtJ_T0005655.1 MGP_NODShiLtJ_G0004745.1 mouse_genomes_project 1 47231999 47290405 - Gm29040 lincRNA lincRNA MGP_NODShiLtJ_T0012131.1 MGP_NODShiLtJ_G0010239.1 mouse_genomes_project 1 158156105 158156256 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016968.1 MGP_NODShiLtJ_G0014997.1 mouse_genomes_project 1 203820171 203822360 + Gm29856 processed_transcript processed_transcript MGP_NODShiLtJ_T0016969.1 MGP_NODShiLtJ_G0014997.1 mouse_genomes_project 1 203821338 203822361 + Gm29856 processed_transcript processed_transcript MGP_NODShiLtJ_T0098168.1 MGP_NODShiLtJ_G0036580.1 mouse_genomes_project 1 98674125 98674397 + Gm25395 scaRNA scaRNA MGP_NODShiLtJ_T0022552.1 MGP_NODShiLtJ_G0016484.1 mouse_genomes_project 1 179439879 179455139 + MGP_NODShiLtJ_P0022552 Acbd6 protein_coding protein_coding MGP_NODShiLtJ_T0022553.1 MGP_NODShiLtJ_G0016484.1 mouse_genomes_project 1 179439881 179582219 + MGP_NODShiLtJ_P0022553 Acbd6 protein_coding protein_coding MGP_NODShiLtJ_T0022554.1 MGP_NODShiLtJ_G0016484.1 mouse_genomes_project 1 179439885 179472554 + MGP_NODShiLtJ_P0022554 Acbd6 protein_coding protein_coding MGP_NODShiLtJ_T0022555.1 MGP_NODShiLtJ_G0016484.1 mouse_genomes_project 1 179444876 179578010 + Acbd6 protein_coding processed_transcript MGP_NODShiLtJ_T0022556.1 MGP_NODShiLtJ_G0016484.1 mouse_genomes_project 1 179449007 179455110 + Acbd6 protein_coding retained_intron MGP_NODShiLtJ_T0022557.1 MGP_NODShiLtJ_G0016484.1 mouse_genomes_project 1 179577905 179579260 + MGP_NODShiLtJ_P0022557 Acbd6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000704.1 MGP_NODShiLtJ_G0000638.1 mouse_genomes_project 1 186322693 186323816 + TEC TEC MGP_NODShiLtJ_T0000370.1 MGP_NODShiLtJ_G0000308.1 mouse_genomes_project 1 10286017 10288142 + TEC TEC MGP_NODShiLtJ_T0098543.1 MGP_NODShiLtJ_G0036937.1 mouse_genomes_project 1 98196908 98197015 - Gm22549 snRNA snRNA MGP_NODShiLtJ_T0005930.1 MGP_NODShiLtJ_G0004964.1 mouse_genomes_project 1 195488977 195491314 - Gm37502 lincRNA lincRNA MGP_NODShiLtJ_T0021756.1 MGP_NODShiLtJ_G0016318.1 mouse_genomes_project 1 149903949 149911344 - MGP_NODShiLtJ_P0021756 Il19 protein_coding protein_coding MGP_NODShiLtJ_T0021757.1 MGP_NODShiLtJ_G0016318.1 mouse_genomes_project 1 149903951 149910484 - MGP_NODShiLtJ_P0021757 Il19 protein_coding protein_coding MGP_NODShiLtJ_T0021758.1 MGP_NODShiLtJ_G0016318.1 mouse_genomes_project 1 149904109 149911358 - MGP_NODShiLtJ_P0021758 Il19 protein_coding protein_coding MGP_NODShiLtJ_T0021759.1 MGP_NODShiLtJ_G0016318.1 mouse_genomes_project 1 149904151 149911316 - MGP_NODShiLtJ_P0021759 Il19 protein_coding protein_coding MGP_NODShiLtJ_T0021401.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120182027 120208474 + 2310035C23Rik protein_coding processed_transcript MGP_NODShiLtJ_T0021402.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120182027 120291145 + MGP_NODShiLtJ_P0021402 2310035C23Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021403.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120182079 120292264 + MGP_NODShiLtJ_P0021403 2310035C23Rik protein_coding protein_coding MGP_NODShiLtJ_T0021404.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120182103 120183317 + 2310035C23Rik protein_coding processed_transcript MGP_NODShiLtJ_T0021405.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120182274 120290696 + MGP_NODShiLtJ_P0021405 2310035C23Rik protein_coding protein_coding MGP_NODShiLtJ_T0021406.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120182607 120275570 + 2310035C23Rik protein_coding retained_intron MGP_NODShiLtJ_T0021407.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120218527 120292259 + MGP_NODShiLtJ_P0021407 2310035C23Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021408.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120228206 120246346 + 2310035C23Rik protein_coding retained_intron MGP_NODShiLtJ_T0021409.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120262718 120271659 + 2310035C23Rik protein_coding retained_intron MGP_NODShiLtJ_T0021410.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120277284 120290598 + 2310035C23Rik protein_coding retained_intron MGP_NODShiLtJ_T0021411.1 MGP_NODShiLtJ_G0016239.1 mouse_genomes_project 1 120278052 120288062 + 2310035C23Rik protein_coding retained_intron MGP_NODShiLtJ_T0021332.1 MGP_NODShiLtJ_G0016220.1 mouse_genomes_project 1 105396487 105398036 + MGP_NODShiLtJ_P0021332 protein_coding protein_coding MGP_NODShiLtJ_T0021333.1 MGP_NODShiLtJ_G0016220.1 mouse_genomes_project 1 105396818 105593950 + MGP_NODShiLtJ_P0021333 protein_coding protein_coding MGP_NODShiLtJ_T0021334.1 MGP_NODShiLtJ_G0016220.1 mouse_genomes_project 1 105396852 105593950 + MGP_NODShiLtJ_P0021334 protein_coding protein_coding MGP_NODShiLtJ_T0021335.1 MGP_NODShiLtJ_G0016220.1 mouse_genomes_project 1 105496946 105501509 + MGP_NODShiLtJ_P0021335 protein_coding protein_coding MGP_NODShiLtJ_T0000743.1 MGP_NODShiLtJ_G0000676.1 mouse_genomes_project 1 206939096 206941767 - TEC TEC MGP_NODShiLtJ_T0009465.1 MGP_NODShiLtJ_G0007598.1 mouse_genomes_project 1 203062815 203062914 - Mir350 miRNA miRNA MGP_NODShiLtJ_T0000513.1 MGP_NODShiLtJ_G0000449.1 mouse_genomes_project 1 88177979 88179458 - TEC TEC MGP_NODShiLtJ_T0019211.1 MGP_NODShiLtJ_G0015804.1 mouse_genomes_project 1 40849227 40857366 + MGP_NODShiLtJ_P0019211 Unc50 protein_coding protein_coding MGP_NODShiLtJ_T0019212.1 MGP_NODShiLtJ_G0015804.1 mouse_genomes_project 1 40849258 40857506 + MGP_NODShiLtJ_P0019212 Unc50 protein_coding protein_coding MGP_NODShiLtJ_T0019213.1 MGP_NODShiLtJ_G0015804.1 mouse_genomes_project 1 40849265 40855861 + MGP_NODShiLtJ_P0019213 Unc50 protein_coding protein_coding MGP_NODShiLtJ_T0019214.1 MGP_NODShiLtJ_G0015804.1 mouse_genomes_project 1 40849274 40855653 + MGP_NODShiLtJ_P0019214 Unc50 protein_coding protein_coding MGP_NODShiLtJ_T0019215.1 MGP_NODShiLtJ_G0015804.1 mouse_genomes_project 1 40849290 40857369 + MGP_NODShiLtJ_P0019215 Unc50 protein_coding protein_coding MGP_NODShiLtJ_T0019216.1 MGP_NODShiLtJ_G0015804.1 mouse_genomes_project 1 40849296 40850643 + MGP_NODShiLtJ_P0019216 Unc50 protein_coding protein_coding MGP_NODShiLtJ_T0019217.1 MGP_NODShiLtJ_G0015804.1 mouse_genomes_project 1 40850432 40855995 + Unc50 protein_coding retained_intron MGP_NODShiLtJ_T0000476.1 MGP_NODShiLtJ_G0000412.1 mouse_genomes_project 1 68101664 68110188 + TEC TEC MGP_NODShiLtJ_T0022926.1 MGP_NODShiLtJ_G0016552.1 mouse_genomes_project 1 189142506 189154738 + MGP_NODShiLtJ_P0022926 Ccdc181 protein_coding protein_coding MGP_NODShiLtJ_T0002839.1 MGP_NODShiLtJ_G0002675.1 mouse_genomes_project 1 151507487 151508869 + Gm15849 antisense antisense MGP_NODShiLtJ_T0023854.1 MGP_NODShiLtJ_G0016778.1 mouse_genomes_project 1 211877705 211902087 - MGP_NODShiLtJ_P0023854 Marc1 protein_coding protein_coding MGP_NODShiLtJ_T0023855.1 MGP_NODShiLtJ_G0016778.1 mouse_genomes_project 1 211878647 211901903 - MGP_NODShiLtJ_P0023855 Marc1 protein_coding protein_coding MGP_NODShiLtJ_T0000573.1 MGP_NODShiLtJ_G0000509.1 mouse_genomes_project 1 128143525 128143927 + TEC TEC MGP_NODShiLtJ_T0000750.1 MGP_NODShiLtJ_G0000683.1 mouse_genomes_project 1 208916610 208919850 - TEC TEC MGP_NODShiLtJ_T0101512.1 MGP_NODShiLtJ_G0039682.1 mouse_genomes_project 1 200029546 200030090 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012212.1 MGP_NODShiLtJ_G0010320.1 mouse_genomes_project 1 196336160 196336455 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023118.1 MGP_NODShiLtJ_G0016595.1 mouse_genomes_project 1 195506984 195529172 - MGP_NODShiLtJ_P0023118 Uhmk1 protein_coding protein_coding MGP_NODShiLtJ_T0023119.1 MGP_NODShiLtJ_G0016595.1 mouse_genomes_project 1 195508096 195529678 - MGP_NODShiLtJ_P0023119 Uhmk1 protein_coding protein_coding MGP_NODShiLtJ_T0000614.1 MGP_NODShiLtJ_G0000550.1 mouse_genomes_project 1 150974986 150975493 - TEC TEC MGP_NODShiLtJ_T0006000.1 MGP_NODShiLtJ_G0005019.1 mouse_genomes_project 1 222880793 222887079 - Gm32250 lincRNA lincRNA MGP_NODShiLtJ_T0000385.1 MGP_NODShiLtJ_G0000323.1 mouse_genomes_project 1 15271765 15274140 - TEC TEC MGP_NODShiLtJ_T0023697.1 MGP_NODShiLtJ_G0016742.1 mouse_genomes_project 1 207562119 207597505 + MGP_NODShiLtJ_P0023697 Acbd3 protein_coding protein_coding MGP_NODShiLtJ_T0023698.1 MGP_NODShiLtJ_G0016742.1 mouse_genomes_project 1 207562178 207599392 + MGP_NODShiLtJ_P0023698 Acbd3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023699.1 MGP_NODShiLtJ_G0016742.1 mouse_genomes_project 1 207565933 207570571 + Acbd3 protein_coding retained_intron MGP_NODShiLtJ_T0023494.1 MGP_NODShiLtJ_G0016705.1 mouse_genomes_project 1 201199166 201677175 - MGP_NODShiLtJ_P0023494 Rgs7 protein_coding protein_coding MGP_NODShiLtJ_T0023495.1 MGP_NODShiLtJ_G0016705.1 mouse_genomes_project 1 201199167 201676951 - MGP_NODShiLtJ_P0023495 Rgs7 protein_coding protein_coding MGP_NODShiLtJ_T0023496.1 MGP_NODShiLtJ_G0016705.1 mouse_genomes_project 1 201199296 201677065 - MGP_NODShiLtJ_P0023496 Rgs7 protein_coding protein_coding MGP_NODShiLtJ_T0023497.1 MGP_NODShiLtJ_G0016705.1 mouse_genomes_project 1 201199813 201675801 - MGP_NODShiLtJ_P0023497 Rgs7 protein_coding protein_coding MGP_NODShiLtJ_T0023498.1 MGP_NODShiLtJ_G0016705.1 mouse_genomes_project 1 201199813 201240092 - MGP_NODShiLtJ_P0023498 Rgs7 protein_coding protein_coding MGP_NODShiLtJ_T0023499.1 MGP_NODShiLtJ_G0016705.1 mouse_genomes_project 1 201199813 201240032 - MGP_NODShiLtJ_P0023499 Rgs7 protein_coding protein_coding MGP_NODShiLtJ_T0023500.1 MGP_NODShiLtJ_G0016705.1 mouse_genomes_project 1 201199814 201223376 - MGP_NODShiLtJ_P0023500 Rgs7 protein_coding protein_coding MGP_NODShiLtJ_T0023501.1 MGP_NODShiLtJ_G0016705.1 mouse_genomes_project 1 201219264 201222896 - Rgs7 protein_coding retained_intron MGP_NODShiLtJ_T0098170.1 MGP_NODShiLtJ_G0036582.1 mouse_genomes_project 1 145895353 145895483 + Gm23370 scaRNA scaRNA MGP_NODShiLtJ_T0000774.1 MGP_NODShiLtJ_G0000706.1 mouse_genomes_project 1 219192368 219193375 - TEC TEC MGP_NODShiLtJ_T0002840.1 MGP_NODShiLtJ_G0002676.1 mouse_genomes_project 1 151897797 151901269 + Gm10538 antisense antisense MGP_NODShiLtJ_T0002917.1 MGP_NODShiLtJ_G0002736.1 mouse_genomes_project 1 204873816 204876880 - antisense antisense MGP_NODShiLtJ_T0019390.1 MGP_NODShiLtJ_G0015842.1 mouse_genomes_project 1 46908500 46910785 + Gpr45 protein_coding processed_transcript MGP_NODShiLtJ_T0019391.1 MGP_NODShiLtJ_G0015842.1 mouse_genomes_project 1 46908591 47006187 + MGP_NODShiLtJ_P0019391 Gpr45 protein_coding protein_coding MGP_NODShiLtJ_T0019392.1 MGP_NODShiLtJ_G0015842.1 mouse_genomes_project 1 46908767 47001906 + Gpr45 protein_coding processed_transcript MGP_NODShiLtJ_T0019393.1 MGP_NODShiLtJ_G0015842.1 mouse_genomes_project 1 46908810 46909507 + Gpr45 protein_coding processed_transcript MGP_NODShiLtJ_T0019394.1 MGP_NODShiLtJ_G0015842.1 mouse_genomes_project 1 47002784 47004332 + MGP_NODShiLtJ_P0019394 Gpr45 protein_coding protein_coding MGP_NODShiLtJ_T0002903.1 MGP_NODShiLtJ_G0002724.1 mouse_genomes_project 1 196369139 196373550 + Gm38204 antisense antisense MGP_NODShiLtJ_T0012138.1 MGP_NODShiLtJ_G0010246.1 mouse_genomes_project 1 161681453 161682015 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009441.1 MGP_NODShiLtJ_G0007574.1 mouse_genomes_project 1 152101810 152101931 - Gm44300 miRNA miRNA MGP_NODShiLtJ_T0012219.1 MGP_NODShiLtJ_G0010327.1 mouse_genomes_project 1 202906932 202909452 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012222.1 MGP_NODShiLtJ_G0010330.1 mouse_genomes_project 1 203614545 203614862 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019990.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70709678 70711044 - Ndufs1 protein_coding retained_intron MGP_NODShiLtJ_T0019991.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70709678 70760470 - MGP_NODShiLtJ_P0019991 Ndufs1 protein_coding protein_coding MGP_NODShiLtJ_T0019992.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70709686 70713863 - Ndufs1 protein_coding retained_intron MGP_NODShiLtJ_T0019993.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70709771 70713531 - MGP_NODShiLtJ_P0019993 Ndufs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019994.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70709817 70760380 - MGP_NODShiLtJ_P0019994 Ndufs1 protein_coding protein_coding MGP_NODShiLtJ_T0019995.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70716528 70760311 - MGP_NODShiLtJ_P0019995 Ndufs1 protein_coding protein_coding MGP_NODShiLtJ_T0019996.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70717765 70720383 - Ndufs1 protein_coding retained_intron MGP_NODShiLtJ_T0019997.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70724223 70760317 - Ndufs1 protein_coding retained_intron MGP_NODShiLtJ_T0019998.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70727398 70760315 - Ndufs1 protein_coding retained_intron MGP_NODShiLtJ_T0019999.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70732331 70760338 - MGP_NODShiLtJ_P0019999 Ndufs1 protein_coding protein_coding MGP_NODShiLtJ_T0020000.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70733503 70760314 - MGP_NODShiLtJ_P0020000 Ndufs1 protein_coding protein_coding MGP_NODShiLtJ_T0020001.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70738863 70760441 - MGP_NODShiLtJ_P0020001 Ndufs1 protein_coding protein_coding MGP_NODShiLtJ_T0020002.1 MGP_NODShiLtJ_G0015951.1 mouse_genomes_project 1 70740203 70760481 - MGP_NODShiLtJ_P0020002 Ndufs1 protein_coding protein_coding MGP_NODShiLtJ_T0005710.1 MGP_NODShiLtJ_G0004790.1 mouse_genomes_project 1 81116951 81120044 + Gm8883 lincRNA lincRNA MGP_NODShiLtJ_T0005711.1 MGP_NODShiLtJ_G0004790.1 mouse_genomes_project 1 81116956 81119575 + Gm8883 lincRNA lincRNA MGP_NODShiLtJ_T0005712.1 MGP_NODShiLtJ_G0004790.1 mouse_genomes_project 1 81117241 81118709 + Gm8883 lincRNA lincRNA MGP_NODShiLtJ_T0005713.1 MGP_NODShiLtJ_G0004790.1 mouse_genomes_project 1 81117342 81119427 + Gm8883 lincRNA lincRNA MGP_NODShiLtJ_T0022992.1 MGP_NODShiLtJ_G0016566.1 mouse_genomes_project 1 190658199 190723965 - MGP_NODShiLtJ_P0022992 Rcsd1 protein_coding protein_coding MGP_NODShiLtJ_T0022993.1 MGP_NODShiLtJ_G0016566.1 mouse_genomes_project 1 190660627 190723927 - MGP_NODShiLtJ_P0022993 Rcsd1 protein_coding protein_coding MGP_NODShiLtJ_T0022994.1 MGP_NODShiLtJ_G0016566.1 mouse_genomes_project 1 190679286 190725272 - MGP_NODShiLtJ_P0022994 Rcsd1 protein_coding protein_coding MGP_NODShiLtJ_T0022995.1 MGP_NODShiLtJ_G0016566.1 mouse_genomes_project 1 190720399 190725605 - Rcsd1 protein_coding retained_intron MGP_NODShiLtJ_T0022996.1 MGP_NODShiLtJ_G0016566.1 mouse_genomes_project 1 190724317 190725636 - Rcsd1 protein_coding processed_transcript MGP_NODShiLtJ_T0011130.1 MGP_NODShiLtJ_G0009263.1 mouse_genomes_project 1 35673737 35674029 + Gm23024 misc_RNA misc_RNA MGP_NODShiLtJ_T0011154.1 MGP_NODShiLtJ_G0009287.1 mouse_genomes_project 1 222732315 222732609 + Gm23885 misc_RNA misc_RNA MGP_NODShiLtJ_T0023367.1 MGP_NODShiLtJ_G0016651.1 mouse_genomes_project 1 197791514 197828032 - MGP_NODShiLtJ_P0023367 Atp1a4 protein_coding protein_coding MGP_NODShiLtJ_T0023368.1 MGP_NODShiLtJ_G0016651.1 mouse_genomes_project 1 197815721 197823562 - Atp1a4 protein_coding processed_transcript MGP_NODShiLtJ_T0012148.1 MGP_NODShiLtJ_G0010256.1 mouse_genomes_project 1 166860364 166860757 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002934.1 MGP_NODShiLtJ_G0002751.1 mouse_genomes_project 1 214926051 214962066 - Gm36388 antisense antisense MGP_NODShiLtJ_T0005967.1 MGP_NODShiLtJ_G0004991.1 mouse_genomes_project 1 211587706 211620825 - 1700112H15Rik lincRNA lincRNA MGP_NODShiLtJ_T0011978.1 MGP_NODShiLtJ_G0010086.1 mouse_genomes_project 1 80923262 80924139 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018960.1 MGP_NODShiLtJ_G0015760.1 mouse_genomes_project 1 30509330 30513497 - MGP_NODShiLtJ_P0018960 Gm597 protein_coding protein_coding MGP_NODShiLtJ_T0000766.1 MGP_NODShiLtJ_G0000698.1 mouse_genomes_project 1 214353616 214356598 - TEC TEC MGP_NODShiLtJ_T0018834.1 MGP_NODShiLtJ_G0015725.1 mouse_genomes_project 1 15762396 15778801 + MGP_NODShiLtJ_P0018834 Tmem70 protein_coding protein_coding MGP_NODShiLtJ_T0018835.1 MGP_NODShiLtJ_G0015725.1 mouse_genomes_project 1 15762399 15777820 + Tmem70 protein_coding processed_transcript MGP_NODShiLtJ_T0018836.1 MGP_NODShiLtJ_G0015725.1 mouse_genomes_project 1 15762399 15778881 + MGP_NODShiLtJ_P0018836 Tmem70 protein_coding protein_coding MGP_NODShiLtJ_T0018837.1 MGP_NODShiLtJ_G0015725.1 mouse_genomes_project 1 15762425 15763001 + Tmem70 protein_coding processed_transcript MGP_NODShiLtJ_T0018878.1 MGP_NODShiLtJ_G0015739.1 mouse_genomes_project 1 20778946 20828267 + MGP_NODShiLtJ_P0018878 Paqr8 protein_coding protein_coding MGP_NODShiLtJ_T0018879.1 MGP_NODShiLtJ_G0015739.1 mouse_genomes_project 1 20805992 20827672 + MGP_NODShiLtJ_P0018879 Paqr8 protein_coding protein_coding MGP_NODShiLtJ_T0018880.1 MGP_NODShiLtJ_G0015739.1 mouse_genomes_project 1 20806026 20824368 + MGP_NODShiLtJ_P0018880 Paqr8 protein_coding protein_coding MGP_NODShiLtJ_T0018881.1 MGP_NODShiLtJ_G0015739.1 mouse_genomes_project 1 20809807 20824375 + MGP_NODShiLtJ_P0018881 Paqr8 protein_coding protein_coding MGP_NODShiLtJ_T0000503.1 MGP_NODShiLtJ_G0000439.1 mouse_genomes_project 1 79624792 79631611 - TEC TEC MGP_NODShiLtJ_T0023319.1 MGP_NODShiLtJ_G0016643.1 mouse_genomes_project 1 197551603 197579921 - MGP_NODShiLtJ_P0023319 Vangl2 protein_coding protein_coding MGP_NODShiLtJ_T0023320.1 MGP_NODShiLtJ_G0016643.1 mouse_genomes_project 1 197551603 197578769 - MGP_NODShiLtJ_P0023320 Vangl2 protein_coding protein_coding MGP_NODShiLtJ_T0023321.1 MGP_NODShiLtJ_G0016643.1 mouse_genomes_project 1 197555946 197578769 - MGP_NODShiLtJ_P0023321 Vangl2 protein_coding protein_coding MGP_NODShiLtJ_T0023322.1 MGP_NODShiLtJ_G0016643.1 mouse_genomes_project 1 197556288 197560533 - Vangl2 protein_coding processed_transcript MGP_NODShiLtJ_T0023323.1 MGP_NODShiLtJ_G0016643.1 mouse_genomes_project 1 197561397 197578183 - MGP_NODShiLtJ_P0023323 Vangl2 protein_coding protein_coding MGP_NODShiLtJ_T0023324.1 MGP_NODShiLtJ_G0016643.1 mouse_genomes_project 1 197561480 197578742 - MGP_NODShiLtJ_P0023324 Vangl2 protein_coding protein_coding MGP_NODShiLtJ_T0018538.1 MGP_NODShiLtJ_G0015674.1 mouse_genomes_project 1 337009 347877 - Xkr4 protein_coding processed_transcript MGP_NODShiLtJ_T0018539.1 MGP_NODShiLtJ_G0015674.1 mouse_genomes_project 1 337632 347165 - Xkr4 protein_coding processed_transcript MGP_NODShiLtJ_T0018540.1 MGP_NODShiLtJ_G0015674.1 mouse_genomes_project 1 346014 864357 - MGP_NODShiLtJ_P0018540 Xkr4 protein_coding protein_coding MGP_NODShiLtJ_T0022080.1 MGP_NODShiLtJ_G0016390.1 mouse_genomes_project 1 154587226 154594680 - MGP_NODShiLtJ_P0022080 Gpr37l1 protein_coding protein_coding MGP_NODShiLtJ_T0101027.1 MGP_NODShiLtJ_G0039406.1 mouse_genomes_project 1 212626550 212638269 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101028.1 MGP_NODShiLtJ_G0039406.1 mouse_genomes_project 1 212637497 212638127 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0011901.1 MGP_NODShiLtJ_G0010009.1 mouse_genomes_project 1 55199906 55200343 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021694.1 MGP_NODShiLtJ_G0016300.1 mouse_genomes_project 1 146916432 146965959 - MGP_NODShiLtJ_P0021694 Lct protein_coding protein_coding MGP_NODShiLtJ_T0021695.1 MGP_NODShiLtJ_G0016300.1 mouse_genomes_project 1 146919247 146923923 - Lct protein_coding retained_intron MGP_NODShiLtJ_T0002776.1 MGP_NODShiLtJ_G0002629.1 mouse_genomes_project 1 78342417 78388768 + Gm29114 antisense antisense MGP_NODShiLtJ_T0012245.1 MGP_NODShiLtJ_G0010353.1 mouse_genomes_project 1 217165647 217165788 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023173.1 MGP_NODShiLtJ_G0016612.1 mouse_genomes_project 1 196606850 196619227 + MGP_NODShiLtJ_P0023173 Mpz protein_coding protein_coding MGP_NODShiLtJ_T0023174.1 MGP_NODShiLtJ_G0016612.1 mouse_genomes_project 1 196611643 196616465 + MGP_NODShiLtJ_P0023174 Mpz protein_coding protein_coding MGP_NODShiLtJ_T0023175.1 MGP_NODShiLtJ_G0016612.1 mouse_genomes_project 1 196615551 196616188 + Mpz protein_coding processed_transcript MGP_NODShiLtJ_T0023176.1 MGP_NODShiLtJ_G0016612.1 mouse_genomes_project 1 196615660 196616203 + Mpz protein_coding processed_transcript MGP_NODShiLtJ_T0019870.1 MGP_NODShiLtJ_G0015930.1 mouse_genomes_project 1 66398839 66496230 + MGP_NODShiLtJ_P0019870 Cdk15 protein_coding protein_coding MGP_NODShiLtJ_T0019871.1 MGP_NODShiLtJ_G0015930.1 mouse_genomes_project 1 66398840 66495623 + MGP_NODShiLtJ_P0019871 Cdk15 protein_coding protein_coding MGP_NODShiLtJ_T0019872.1 MGP_NODShiLtJ_G0015930.1 mouse_genomes_project 1 66399061 66399825 + Cdk15 protein_coding processed_transcript MGP_NODShiLtJ_T0019873.1 MGP_NODShiLtJ_G0015930.1 mouse_genomes_project 1 66446028 66495702 + Cdk15 protein_coding processed_transcript MGP_NODShiLtJ_T0012235.1 MGP_NODShiLtJ_G0010343.1 mouse_genomes_project 1 210273194 210289277 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009462.1 MGP_NODShiLtJ_G0007595.1 mouse_genomes_project 1 196514301 196514363 - Gm27552 miRNA miRNA MGP_NODShiLtJ_T0020663.1 MGP_NODShiLtJ_G0016074.1 mouse_genomes_project 1 89660260 89731419 - MGP_NODShiLtJ_P0020663 Serpine2 protein_coding protein_coding MGP_NODShiLtJ_T0020664.1 MGP_NODShiLtJ_G0016074.1 mouse_genomes_project 1 89662908 89692799 - MGP_NODShiLtJ_P0020664 Serpine2 protein_coding protein_coding MGP_NODShiLtJ_T0020665.1 MGP_NODShiLtJ_G0016074.1 mouse_genomes_project 1 89669531 89734857 - MGP_NODShiLtJ_P0020665 Serpine2 protein_coding protein_coding MGP_NODShiLtJ_T0020666.1 MGP_NODShiLtJ_G0016074.1 mouse_genomes_project 1 89684093 89731419 - Serpine2 protein_coding retained_intron MGP_NODShiLtJ_T0020667.1 MGP_NODShiLtJ_G0016074.1 mouse_genomes_project 1 89688397 89691781 - Serpine2 protein_coding retained_intron MGP_NODShiLtJ_T0020668.1 MGP_NODShiLtJ_G0016074.1 mouse_genomes_project 1 89730229 89731358 - Serpine2 protein_coding retained_intron MGP_NODShiLtJ_T0020403.1 MGP_NODShiLtJ_G0016034.1 mouse_genomes_project 1 84435278 84441660 - MGP_NODShiLtJ_P0020403 Ihh protein_coding protein_coding MGP_NODShiLtJ_T0020404.1 MGP_NODShiLtJ_G0016034.1 mouse_genomes_project 1 84437711 84441430 - Ihh protein_coding retained_intron MGP_NODShiLtJ_T0019552.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58307145 58413256 - MGP_NODShiLtJ_P0019552 protein_coding protein_coding MGP_NODShiLtJ_T0019553.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58309636 58412329 - MGP_NODShiLtJ_P0019553 protein_coding protein_coding MGP_NODShiLtJ_T0019554.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58309823 58350515 - MGP_NODShiLtJ_P0019554 protein_coding protein_coding MGP_NODShiLtJ_T0019555.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58309959 58312671 - protein_coding retained_intron MGP_NODShiLtJ_T0019556.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58309977 58312841 - protein_coding retained_intron MGP_NODShiLtJ_T0019557.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58312142 58350516 - protein_coding retained_intron MGP_NODShiLtJ_T0019558.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58329904 58413265 - MGP_NODShiLtJ_P0019558 protein_coding protein_coding MGP_NODShiLtJ_T0019559.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58346019 58350515 - MGP_NODShiLtJ_P0019559 protein_coding protein_coding MGP_NODShiLtJ_T0019560.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58347806 58360132 - protein_coding retained_intron MGP_NODShiLtJ_T0019561.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58350805 58384115 - protein_coding processed_transcript MGP_NODShiLtJ_T0019562.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58372369 58383054 - protein_coding retained_intron MGP_NODShiLtJ_T0019563.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58375835 58384464 - protein_coding retained_intron MGP_NODShiLtJ_T0019564.1 MGP_NODShiLtJ_G0015872.1 mouse_genomes_project 1 58383038 58412844 - protein_coding processed_transcript MGP_NODShiLtJ_T0011840.1 MGP_NODShiLtJ_G0009948.1 mouse_genomes_project 1 36895601 36898006 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005608.1 MGP_NODShiLtJ_G0004715.1 mouse_genomes_project 1 25540659 25541311 - Gm29414 lincRNA lincRNA MGP_NODShiLtJ_T0021534.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137077683 137186042 - MGP_NODShiLtJ_P0021534 Epb41l5 protein_coding protein_coding MGP_NODShiLtJ_T0021535.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137080776 137186040 - MGP_NODShiLtJ_P0021535 Epb41l5 protein_coding protein_coding MGP_NODShiLtJ_T0021536.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137086880 137136695 - Epb41l5 protein_coding retained_intron MGP_NODShiLtJ_T0021537.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137114552 137116764 - Epb41l5 protein_coding retained_intron MGP_NODShiLtJ_T0021538.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137127100 137186106 - MGP_NODShiLtJ_P0021538 Epb41l5 protein_coding protein_coding MGP_NODShiLtJ_T0021539.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137131463 137185723 - MGP_NODShiLtJ_P0021539 Epb41l5 protein_coding protein_coding MGP_NODShiLtJ_T0021540.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137131831 137135630 - Epb41l5 protein_coding retained_intron MGP_NODShiLtJ_T0021541.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137154422 137171196 - Epb41l5 protein_coding retained_intron MGP_NODShiLtJ_T0021542.1 MGP_NODShiLtJ_G0016269.1 mouse_genomes_project 1 137158716 137185730 - MGP_NODShiLtJ_P0021542 Epb41l5 protein_coding protein_coding MGP_NODShiLtJ_T0005764.1 MGP_NODShiLtJ_G0004829.1 mouse_genomes_project 1 100031207 100032054 + Platr5 lincRNA lincRNA MGP_NODShiLtJ_T0005765.1 MGP_NODShiLtJ_G0004829.1 mouse_genomes_project 1 100031271 100032027 + Platr5 lincRNA lincRNA MGP_NODShiLtJ_T0022636.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180756350 180906171 - MGP_NODShiLtJ_P0022636 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022637.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180758944 180906112 - MGP_NODShiLtJ_P0022637 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022638.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180758944 180906168 - MGP_NODShiLtJ_P0022638 Ralgps2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022639.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180759892 180905956 - MGP_NODShiLtJ_P0022639 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022640.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180760298 180906100 - MGP_NODShiLtJ_P0022640 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022641.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180760304 180906177 - MGP_NODShiLtJ_P0022641 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022642.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180761012 180766288 - Ralgps2 protein_coding retained_intron MGP_NODShiLtJ_T0022643.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180765800 180906195 - MGP_NODShiLtJ_P0022643 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022644.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180769237 180906136 - MGP_NODShiLtJ_P0022644 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022645.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180771593 180906162 - MGP_NODShiLtJ_P0022645 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022646.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180771612 180905387 - MGP_NODShiLtJ_P0022646 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022647.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180781215 180783565 - Ralgps2 protein_coding retained_intron MGP_NODShiLtJ_T0022648.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180781269 180785409 - Ralgps2 protein_coding retained_intron MGP_NODShiLtJ_T0022651.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180848447 180905703 - MGP_NODShiLtJ_P0022651 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0022652.1 MGP_NODShiLtJ_G0016498.1 mouse_genomes_project 1 180863094 180905350 - MGP_NODShiLtJ_P0022652 Ralgps2 protein_coding protein_coding MGP_NODShiLtJ_T0011924.1 MGP_NODShiLtJ_G0010032.1 mouse_genomes_project 1 64215515 64216492 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002879.1 MGP_NODShiLtJ_G0002707.1 mouse_genomes_project 1 185593554 185594349 + Gm37634 antisense antisense MGP_NODShiLtJ_T0012055.1 MGP_NODShiLtJ_G0010163.1 mouse_genomes_project 1 121022151 121022422 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005700.1 MGP_NODShiLtJ_G0004780.1 mouse_genomes_project 1 71655609 71659879 + Gm13749 lincRNA lincRNA MGP_NODShiLtJ_T0000641.1 MGP_NODShiLtJ_G0000575.1 mouse_genomes_project 1 158040774 158041194 + TEC TEC MGP_NODShiLtJ_T0011764.1 MGP_NODShiLtJ_G0009872.1 mouse_genomes_project 1 7756258 7756894 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011865.1 MGP_NODShiLtJ_G0009973.1 mouse_genomes_project 1 45977985 45979030 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000653.1 MGP_NODShiLtJ_G0000587.1 mouse_genomes_project 1 163806418 163806552 + TEC TEC MGP_NODShiLtJ_T0011798.1 MGP_NODShiLtJ_G0009906.1 mouse_genomes_project 1 20299859 20301319 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101481.1 MGP_NODShiLtJ_G0039651.1 mouse_genomes_project 1 99149849 99150693 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0019075.1 MGP_NODShiLtJ_G0015782.1 mouse_genomes_project 1 37988581 38012479 + MGP_NODShiLtJ_P0019075 Plekhb2 protein_coding protein_coding MGP_NODShiLtJ_T0019076.1 MGP_NODShiLtJ_G0015782.1 mouse_genomes_project 1 37988597 38018095 + MGP_NODShiLtJ_P0019076 Plekhb2 protein_coding protein_coding MGP_NODShiLtJ_T0019077.1 MGP_NODShiLtJ_G0015782.1 mouse_genomes_project 1 37990407 38002009 + MGP_NODShiLtJ_P0019077 Plekhb2 protein_coding protein_coding MGP_NODShiLtJ_T0019078.1 MGP_NODShiLtJ_G0015782.1 mouse_genomes_project 1 38016169 38018092 + Plekhb2 protein_coding processed_transcript MGP_NODShiLtJ_T0099748.1 MGP_NODShiLtJ_G0038142.1 mouse_genomes_project 1 38357373 38357502 - Gm25096 snoRNA snoRNA MGP_NODShiLtJ_T0023468.1 MGP_NODShiLtJ_G0016688.1 mouse_genomes_project 1 200017118 200020122 + MGP_NODShiLtJ_P0023468 Olfr433 protein_coding protein_coding MGP_NODShiLtJ_T0023480.1 MGP_NODShiLtJ_G0016698.1 mouse_genomes_project 1 200426914 200428812 - MGP_NODShiLtJ_P0023480 Olfr418 protein_coding protein_coding MGP_NODShiLtJ_T0012206.1 MGP_NODShiLtJ_G0010314.1 mouse_genomes_project 1 194809378 194809962 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000602.1 MGP_NODShiLtJ_G0000538.1 mouse_genomes_project 1 148013925 148016420 + TEC TEC MGP_NODShiLtJ_T0012152.1 MGP_NODShiLtJ_G0010260.1 mouse_genomes_project 1 171485506 171486296 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011862.1 MGP_NODShiLtJ_G0009970.1 mouse_genomes_project 1 42797824 42798107 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099780.1 MGP_NODShiLtJ_G0038174.1 mouse_genomes_project 1 109318512 109318640 + Gm26078 snoRNA snoRNA MGP_NODShiLtJ_T0011967.1 MGP_NODShiLtJ_G0010075.1 mouse_genomes_project 1 74038699 74039111 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005629.1 MGP_NODShiLtJ_G0004734.1 mouse_genomes_project 1 42563518 42573737 - Gm37821 lincRNA lincRNA MGP_NODShiLtJ_T0023386.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198056817 198064595 + MGP_NODShiLtJ_P0023386 Igsf9 protein_coding protein_coding MGP_NODShiLtJ_T0023387.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198057227 198066640 + MGP_NODShiLtJ_P0023387 Igsf9 protein_coding protein_coding MGP_NODShiLtJ_T0023388.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198057234 198064632 + Igsf9 protein_coding processed_transcript MGP_NODShiLtJ_T0023389.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198057243 198073870 + MGP_NODShiLtJ_P0023389 Igsf9 protein_coding protein_coding MGP_NODShiLtJ_T0023390.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198057248 198064815 + Igsf9 protein_coding retained_intron MGP_NODShiLtJ_T0023391.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198057248 198066046 + Igsf9 protein_coding retained_intron MGP_NODShiLtJ_T0023392.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198057259 198073870 + MGP_NODShiLtJ_P0023392 Igsf9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023393.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198057342 198073871 + MGP_NODShiLtJ_P0023393 Igsf9 protein_coding protein_coding MGP_NODShiLtJ_T0023394.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198066085 198066979 + Igsf9 protein_coding retained_intron MGP_NODShiLtJ_T0023395.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198066962 198069866 + MGP_NODShiLtJ_P0023395 Igsf9 protein_coding protein_coding MGP_NODShiLtJ_T0023396.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198068933 198070728 + Igsf9 protein_coding retained_intron MGP_NODShiLtJ_T0023397.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198068960 198070754 + Igsf9 protein_coding retained_intron MGP_NODShiLtJ_T0023398.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198069758 198071216 + Igsf9 protein_coding retained_intron MGP_NODShiLtJ_T0023399.1 MGP_NODShiLtJ_G0016658.1 mouse_genomes_project 1 198072785 198073607 + Igsf9 protein_coding retained_intron MGP_NODShiLtJ_T0000469.1 MGP_NODShiLtJ_G0000405.1 mouse_genomes_project 1 66599593 66601235 - TEC TEC MGP_NODShiLtJ_T0000499.1 MGP_NODShiLtJ_G0000435.1 mouse_genomes_project 1 77311778 77314151 - TEC TEC MGP_NODShiLtJ_T0005840.1 MGP_NODShiLtJ_G0004892.1 mouse_genomes_project 1 151113830 151148660 + Gm26892 lincRNA lincRNA MGP_NODShiLtJ_T0101465.1 MGP_NODShiLtJ_G0039635.1 mouse_genomes_project 1 21251647 21256356 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011990.1 MGP_NODShiLtJ_G0010098.1 mouse_genomes_project 1 89351754 89353109 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011774.1 MGP_NODShiLtJ_G0009882.1 mouse_genomes_project 1 10184481 10184743 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020908.1 MGP_NODShiLtJ_G0016131.1 mouse_genomes_project 1 98054070 98066764 + MGP_NODShiLtJ_P0020908 Eif4e2 protein_coding protein_coding MGP_NODShiLtJ_T0020909.1 MGP_NODShiLtJ_G0016131.1 mouse_genomes_project 1 98054070 98069013 + MGP_NODShiLtJ_P0020909 Eif4e2 protein_coding protein_coding MGP_NODShiLtJ_T0020910.1 MGP_NODShiLtJ_G0016131.1 mouse_genomes_project 1 98054070 98080649 + MGP_NODShiLtJ_P0020910 Eif4e2 protein_coding protein_coding MGP_NODShiLtJ_T0020911.1 MGP_NODShiLtJ_G0016131.1 mouse_genomes_project 1 98054070 98080649 + MGP_NODShiLtJ_P0020911 Eif4e2 protein_coding protein_coding MGP_NODShiLtJ_T0020912.1 MGP_NODShiLtJ_G0016131.1 mouse_genomes_project 1 98054070 98074860 + MGP_NODShiLtJ_P0020912 Eif4e2 protein_coding protein_coding MGP_NODShiLtJ_T0020913.1 MGP_NODShiLtJ_G0016131.1 mouse_genomes_project 1 98054095 98066757 + MGP_NODShiLtJ_P0020913 Eif4e2 protein_coding protein_coding MGP_NODShiLtJ_T0020914.1 MGP_NODShiLtJ_G0016131.1 mouse_genomes_project 1 98054135 98066030 + MGP_NODShiLtJ_P0020914 Eif4e2 protein_coding protein_coding MGP_NODShiLtJ_T0020915.1 MGP_NODShiLtJ_G0016131.1 mouse_genomes_project 1 98054442 98068221 + MGP_NODShiLtJ_P0020915 Eif4e2 protein_coding protein_coding MGP_NODShiLtJ_T0002719.1 MGP_NODShiLtJ_G0002583.1 mouse_genomes_project 1 17022442 17130954 - antisense antisense MGP_NODShiLtJ_T0020342.1 MGP_NODShiLtJ_G0016021.1 mouse_genomes_project 1 84032769 84056373 - MGP_NODShiLtJ_P0020342 Zfp142 protein_coding protein_coding MGP_NODShiLtJ_T0020343.1 MGP_NODShiLtJ_G0016021.1 mouse_genomes_project 1 84034068 84056370 - MGP_NODShiLtJ_P0020343 Zfp142 protein_coding protein_coding MGP_NODShiLtJ_T0020344.1 MGP_NODShiLtJ_G0016021.1 mouse_genomes_project 1 84034144 84056490 - MGP_NODShiLtJ_P0020344 Zfp142 protein_coding protein_coding MGP_NODShiLtJ_T0020345.1 MGP_NODShiLtJ_G0016021.1 mouse_genomes_project 1 84034325 84056591 - MGP_NODShiLtJ_P0020345 Zfp142 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020346.1 MGP_NODShiLtJ_G0016021.1 mouse_genomes_project 1 84034511 84054042 - MGP_NODShiLtJ_P0020346 Zfp142 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020347.1 MGP_NODShiLtJ_G0016021.1 mouse_genomes_project 1 84050603 84056540 - Zfp142 protein_coding retained_intron MGP_NODShiLtJ_T0020348.1 MGP_NODShiLtJ_G0016021.1 mouse_genomes_project 1 84050610 84056297 - Zfp142 protein_coding retained_intron MGP_NODShiLtJ_T0020349.1 MGP_NODShiLtJ_G0016021.1 mouse_genomes_project 1 84053963 84056478 - Zfp142 protein_coding processed_transcript MGP_NODShiLtJ_T0000634.1 MGP_NODShiLtJ_G0000569.1 mouse_genomes_project 1 157627570 157629555 + TEC TEC MGP_NODShiLtJ_T0019963.1 MGP_NODShiLtJ_G0015944.1 mouse_genomes_project 1 68044545 68085503 + Cd28 protein_coding processed_transcript MGP_NODShiLtJ_T0019964.1 MGP_NODShiLtJ_G0015944.1 mouse_genomes_project 1 68068643 68095668 + MGP_NODShiLtJ_P0019964 Cd28 protein_coding protein_coding MGP_NODShiLtJ_T0019965.1 MGP_NODShiLtJ_G0015944.1 mouse_genomes_project 1 68068687 68086965 + Cd28 protein_coding retained_intron MGP_NODShiLtJ_T0021551.1 MGP_NODShiLtJ_G0016271.1 mouse_genomes_project 1 137516606 137521924 - MGP_NODShiLtJ_P0021551 Tmem177 protein_coding protein_coding MGP_NODShiLtJ_T0022888.1 MGP_NODShiLtJ_G0016541.1 mouse_genomes_project 1 188167419 188186219 - MGP_NODShiLtJ_P0022888 Gorab protein_coding protein_coding MGP_NODShiLtJ_T0022889.1 MGP_NODShiLtJ_G0016541.1 mouse_genomes_project 1 188167423 188186206 - MGP_NODShiLtJ_P0022889 Gorab protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022890.1 MGP_NODShiLtJ_G0016541.1 mouse_genomes_project 1 188176964 188186161 - Gorab protein_coding retained_intron MGP_NODShiLtJ_T0097867.1 MGP_NODShiLtJ_G0036279.1 mouse_genomes_project 1 154574377 154574478 - Gm26280 rRNA rRNA MGP_NODShiLtJ_T0016867.1 MGP_NODShiLtJ_G0014964.1 mouse_genomes_project 1 43092254 43096870 - Gm15832 processed_transcript processed_transcript MGP_NODShiLtJ_T0002772.1 MGP_NODShiLtJ_G0002625.1 mouse_genomes_project 1 69632504 69637419 - Pard3bos2 antisense antisense MGP_NODShiLtJ_T0005994.1 MGP_NODShiLtJ_G0005014.1 mouse_genomes_project 1 219147289 219150273 - Gm37432 lincRNA lincRNA MGP_NODShiLtJ_T0021423.1 MGP_NODShiLtJ_G0016243.1 mouse_genomes_project 1 121125771 121313444 - MGP_NODShiLtJ_P0021423 Bcl2 protein_coding protein_coding MGP_NODShiLtJ_T0021424.1 MGP_NODShiLtJ_G0016243.1 mouse_genomes_project 1 121303661 121312349 - MGP_NODShiLtJ_P0021424 Bcl2 protein_coding protein_coding MGP_NODShiLtJ_T0021345.1 MGP_NODShiLtJ_G0016226.1 mouse_genomes_project 1 107335728 107360851 + MGP_NODShiLtJ_P0021345 Fam174a protein_coding protein_coding MGP_NODShiLtJ_T0021346.1 MGP_NODShiLtJ_G0016226.1 mouse_genomes_project 1 107335733 107350074 + MGP_NODShiLtJ_P0021346 Fam174a protein_coding protein_coding MGP_NODShiLtJ_T0019038.1 MGP_NODShiLtJ_G0015773.1 mouse_genomes_project 1 37521261 37525642 - MGP_NODShiLtJ_P0019038 Ccdc115 protein_coding protein_coding MGP_NODShiLtJ_T0019039.1 MGP_NODShiLtJ_G0015773.1 mouse_genomes_project 1 37521269 37523686 - Ccdc115 protein_coding retained_intron MGP_NODShiLtJ_T0009407.1 MGP_NODShiLtJ_G0007540.1 mouse_genomes_project 1 72112251 72112320 + Gm25748 miRNA miRNA MGP_NODShiLtJ_T0023449.1 MGP_NODShiLtJ_G0016678.1 mouse_genomes_project 1 199225391 199251871 - MGP_NODShiLtJ_P0023449 protein_coding protein_coding MGP_NODShiLtJ_T0005975.1 MGP_NODShiLtJ_G0004998.1 mouse_genomes_project 1 212586545 212594995 - Gm2061 lincRNA lincRNA MGP_NODShiLtJ_T0012160.1 MGP_NODShiLtJ_G0010268.1 mouse_genomes_project 1 173940978 173941338 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101510.1 MGP_NODShiLtJ_G0039680.1 mouse_genomes_project 1 199735728 199738170 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000647.1 MGP_NODShiLtJ_G0000581.1 mouse_genomes_project 1 158921058 158925181 - TEC TEC MGP_NODShiLtJ_T0098519.1 MGP_NODShiLtJ_G0036913.1 mouse_genomes_project 1 37046352 37046445 - Gm23792 snRNA snRNA MGP_NODShiLtJ_T0020270.1 MGP_NODShiLtJ_G0016007.1 mouse_genomes_project 1 83587921 83594615 + MGP_NODShiLtJ_P0020270 Cxcr2 protein_coding protein_coding MGP_NODShiLtJ_T0012117.1 MGP_NODShiLtJ_G0010225.1 mouse_genomes_project 1 150216644 150217857 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019000.1 MGP_NODShiLtJ_G0015769.1 mouse_genomes_project 1 36785919 36799168 - MGP_NODShiLtJ_P0019000 Bag2 protein_coding protein_coding MGP_NODShiLtJ_T0019001.1 MGP_NODShiLtJ_G0015769.1 mouse_genomes_project 1 36787173 36789172 - Bag2 protein_coding retained_intron MGP_NODShiLtJ_T0019002.1 MGP_NODShiLtJ_G0015769.1 mouse_genomes_project 1 36787236 36799114 - MGP_NODShiLtJ_P0019002 Bag2 protein_coding protein_coding MGP_NODShiLtJ_T0019003.1 MGP_NODShiLtJ_G0015769.1 mouse_genomes_project 1 36798154 36799100 - Bag2 protein_coding retained_intron MGP_NODShiLtJ_T0000465.1 MGP_NODShiLtJ_G0000401.1 mouse_genomes_project 1 62315107 62316696 + TEC TEC MGP_NODShiLtJ_T0012165.1 MGP_NODShiLtJ_G0010273.1 mouse_genomes_project 1 175690392 175691197 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098527.1 MGP_NODShiLtJ_G0036921.1 mouse_genomes_project 1 68891629 68891732 + Gm25839 snRNA snRNA MGP_NODShiLtJ_T0005983.1 MGP_NODShiLtJ_G0005004.1 mouse_genomes_project 1 214736457 214751337 + Gm37896 lincRNA lincRNA MGP_NODShiLtJ_T0002793.1 MGP_NODShiLtJ_G0002638.1 mouse_genomes_project 1 84826184 84830414 - Gm15178 antisense antisense MGP_NODShiLtJ_T0023290.1 MGP_NODShiLtJ_G0016634.1 mouse_genomes_project 1 196995667 197006005 - MGP_NODShiLtJ_P0023290 protein_coding protein_coding MGP_NODShiLtJ_T0023291.1 MGP_NODShiLtJ_G0016634.1 mouse_genomes_project 1 197000528 197004202 - MGP_NODShiLtJ_P0023291 protein_coding protein_coding MGP_NODShiLtJ_T0021969.1 MGP_NODShiLtJ_G0016363.1 mouse_genomes_project 1 152928212 152933219 - MGP_NODShiLtJ_P0021969 protein_coding protein_coding MGP_NODShiLtJ_T0009436.1 MGP_NODShiLtJ_G0007569.1 mouse_genomes_project 1 133586143 133586215 - Gm23393 miRNA miRNA MGP_NODShiLtJ_T0000533.1 MGP_NODShiLtJ_G0000469.1 mouse_genomes_project 1 95374670 95379370 - TEC TEC MGP_NODShiLtJ_T0020055.1 MGP_NODShiLtJ_G0015963.1 mouse_genomes_project 1 72432698 72470170 + MGP_NODShiLtJ_P0020055 Ccnyl1 protein_coding protein_coding MGP_NODShiLtJ_T0020056.1 MGP_NODShiLtJ_G0015963.1 mouse_genomes_project 1 72433065 72468852 + MGP_NODShiLtJ_P0020056 Ccnyl1 protein_coding protein_coding MGP_NODShiLtJ_T0020057.1 MGP_NODShiLtJ_G0015963.1 mouse_genomes_project 1 72433422 72455720 + MGP_NODShiLtJ_P0020057 Ccnyl1 protein_coding protein_coding MGP_NODShiLtJ_T0020058.1 MGP_NODShiLtJ_G0015963.1 mouse_genomes_project 1 72435496 72470093 + MGP_NODShiLtJ_P0020058 Ccnyl1 protein_coding protein_coding MGP_NODShiLtJ_T0020787.1 MGP_NODShiLtJ_G0016098.1 mouse_genomes_project 1 95686207 95686900 + MGP_NODShiLtJ_P0020787 protein_coding protein_coding MGP_NODShiLtJ_T0022968.1 MGP_NODShiLtJ_G0016563.1 mouse_genomes_project 1 190458397 190463510 + Mpc2 protein_coding retained_intron MGP_NODShiLtJ_T0022969.1 MGP_NODShiLtJ_G0016563.1 mouse_genomes_project 1 190458797 190480162 + MGP_NODShiLtJ_P0022969 Mpc2 protein_coding protein_coding MGP_NODShiLtJ_T0022970.1 MGP_NODShiLtJ_G0016563.1 mouse_genomes_project 1 190458984 190476642 + Mpc2 protein_coding retained_intron MGP_NODShiLtJ_T0022971.1 MGP_NODShiLtJ_G0016563.1 mouse_genomes_project 1 190459125 190480056 + MGP_NODShiLtJ_P0022971 Mpc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022972.1 MGP_NODShiLtJ_G0016563.1 mouse_genomes_project 1 190477089 190480067 + Mpc2 protein_coding processed_transcript MGP_NODShiLtJ_T0000552.1 MGP_NODShiLtJ_G0000488.1 mouse_genomes_project 1 102221944 102223803 - TEC TEC MGP_NODShiLtJ_T0101012.1 MGP_NODShiLtJ_G0039399.1 mouse_genomes_project 1 180788006 180790649 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101013.1 MGP_NODShiLtJ_G0039399.1 mouse_genomes_project 1 180788328 180788655 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0020074.1 MGP_NODShiLtJ_G0015968.1 mouse_genomes_project 1 72836035 72837964 - MGP_NODShiLtJ_P0020074 Crygd protein_coding protein_coding MGP_NODShiLtJ_T0020075.1 MGP_NODShiLtJ_G0015968.1 mouse_genomes_project 1 72836896 72837964 - Crygd protein_coding retained_intron MGP_NODShiLtJ_T0011961.1 MGP_NODShiLtJ_G0010069.1 mouse_genomes_project 1 72792983 72793636 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011889.1 MGP_NODShiLtJ_G0009997.1 mouse_genomes_project 1 51715784 51716080 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020817.1 MGP_NODShiLtJ_G0016108.1 mouse_genomes_project 1 96597993 96621804 - MGP_NODShiLtJ_P0020817 Gpr55 protein_coding protein_coding MGP_NODShiLtJ_T0020192.1 MGP_NODShiLtJ_G0015991.1 mouse_genomes_project 1 80423016 80602770 - MGP_NODShiLtJ_P0020192 Abca12 protein_coding protein_coding MGP_NODShiLtJ_T0020193.1 MGP_NODShiLtJ_G0015991.1 mouse_genomes_project 1 80424025 80552946 - MGP_NODShiLtJ_P0020193 Abca12 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020194.1 MGP_NODShiLtJ_G0015991.1 mouse_genomes_project 1 80424025 80550767 - MGP_NODShiLtJ_P0020194 Abca12 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020195.1 MGP_NODShiLtJ_G0015991.1 mouse_genomes_project 1 80469172 80487167 - Abca12 protein_coding retained_intron MGP_NODShiLtJ_T0020196.1 MGP_NODShiLtJ_G0015991.1 mouse_genomes_project 1 80491901 80602770 - Abca12 protein_coding retained_intron MGP_NODShiLtJ_T0020197.1 MGP_NODShiLtJ_G0015991.1 mouse_genomes_project 1 80513105 80516274 - Abca12 protein_coding retained_intron MGP_NODShiLtJ_T0020198.1 MGP_NODShiLtJ_G0015991.1 mouse_genomes_project 1 80547045 80602756 - Abca12 protein_coding retained_intron MGP_NODShiLtJ_T0022480.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177360395 177412451 + MGP_NODShiLtJ_P0022480 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022481.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177368456 177403227 + MGP_NODShiLtJ_P0022481 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022482.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177371692 177405144 + MGP_NODShiLtJ_P0022482 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022483.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177372352 177404936 + MGP_NODShiLtJ_P0022483 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022484.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177372390 177407694 + MGP_NODShiLtJ_P0022484 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022485.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177372671 177403277 + MGP_NODShiLtJ_P0022485 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022486.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177372735 177403282 + MGP_NODShiLtJ_P0022486 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022487.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177372751 177405105 + MGP_NODShiLtJ_P0022487 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022488.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177372787 177409795 + MGP_NODShiLtJ_P0022488 Rgs8 protein_coding protein_coding MGP_NODShiLtJ_T0022489.1 MGP_NODShiLtJ_G0016470.1 mouse_genomes_project 1 177374564 177377853 + Rgs8 protein_coding processed_transcript MGP_NODShiLtJ_T0021265.1 MGP_NODShiLtJ_G0016209.1 mouse_genomes_project 1 104874623 104906080 + MGP_NODShiLtJ_P0021265 Ppp1r7 protein_coding protein_coding MGP_NODShiLtJ_T0021266.1 MGP_NODShiLtJ_G0016209.1 mouse_genomes_project 1 104875424 104884421 + MGP_NODShiLtJ_P0021266 Ppp1r7 protein_coding protein_coding MGP_NODShiLtJ_T0021267.1 MGP_NODShiLtJ_G0016209.1 mouse_genomes_project 1 104875476 104884352 + MGP_NODShiLtJ_P0021267 Ppp1r7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021415.1 MGP_NODShiLtJ_G0016241.1 mouse_genomes_project 1 120554927 120598583 + MGP_NODShiLtJ_P0021415 Zcchc2 protein_coding protein_coding MGP_NODShiLtJ_T0021416.1 MGP_NODShiLtJ_G0016241.1 mouse_genomes_project 1 120555210 120598576 + MGP_NODShiLtJ_P0021416 Zcchc2 protein_coding protein_coding MGP_NODShiLtJ_T0021417.1 MGP_NODShiLtJ_G0016241.1 mouse_genomes_project 1 120568643 120596957 + MGP_NODShiLtJ_P0021417 Zcchc2 protein_coding protein_coding MGP_NODShiLtJ_T0021418.1 MGP_NODShiLtJ_G0016241.1 mouse_genomes_project 1 120568658 120592010 + MGP_NODShiLtJ_P0021418 Zcchc2 protein_coding protein_coding MGP_NODShiLtJ_T0021419.1 MGP_NODShiLtJ_G0016241.1 mouse_genomes_project 1 120576265 120587780 + MGP_NODShiLtJ_P0021419 Zcchc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011896.1 MGP_NODShiLtJ_G0010004.1 mouse_genomes_project 1 54228154 54229263 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023826.1 MGP_NODShiLtJ_G0016771.1 mouse_genomes_project 1 210291986 210293918 + Aida protein_coding retained_intron MGP_NODShiLtJ_T0023827.1 MGP_NODShiLtJ_G0016771.1 mouse_genomes_project 1 210292723 210299346 + Aida protein_coding processed_transcript MGP_NODShiLtJ_T0023828.1 MGP_NODShiLtJ_G0016771.1 mouse_genomes_project 1 210292915 210317101 + MGP_NODShiLtJ_P0023828 Aida protein_coding protein_coding MGP_NODShiLtJ_T0023829.1 MGP_NODShiLtJ_G0016771.1 mouse_genomes_project 1 210292966 210313477 + MGP_NODShiLtJ_P0023829 Aida protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023830.1 MGP_NODShiLtJ_G0016771.1 mouse_genomes_project 1 210299263 210316828 + Aida protein_coding retained_intron MGP_NODShiLtJ_T0023831.1 MGP_NODShiLtJ_G0016771.1 mouse_genomes_project 1 210300932 210319981 + Aida protein_coding retained_intron MGP_NODShiLtJ_T0023832.1 MGP_NODShiLtJ_G0016771.1 mouse_genomes_project 1 210301072 210313771 + Aida protein_coding retained_intron MGP_NODShiLtJ_T0019327.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485191 43612478 + MGP_NODShiLtJ_P0019327 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019328.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485191 43612478 + MGP_NODShiLtJ_P0019328 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019329.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485448 43486735 + Map4k4 protein_coding retained_intron MGP_NODShiLtJ_T0019330.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485448 43576276 + MGP_NODShiLtJ_P0019330 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019331.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485457 43610922 + MGP_NODShiLtJ_P0019331 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019332.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485457 43610922 + MGP_NODShiLtJ_P0019332 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019333.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485458 43610922 + MGP_NODShiLtJ_P0019333 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019334.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485502 43611137 + MGP_NODShiLtJ_P0019334 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019335.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43485508 43611093 + MGP_NODShiLtJ_P0019335 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019336.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43549778 43569273 + Map4k4 protein_coding processed_transcript MGP_NODShiLtJ_T0019337.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43550473 43562916 + Map4k4 protein_coding processed_transcript MGP_NODShiLtJ_T0019338.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43585702 43586669 + Map4k4 protein_coding retained_intron MGP_NODShiLtJ_T0019339.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43586000 43592454 + MGP_NODShiLtJ_P0019339 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019340.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43586001 43591011 + MGP_NODShiLtJ_P0019340 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019341.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43586784 43596372 + MGP_NODShiLtJ_P0019341 Map4k4 protein_coding protein_coding MGP_NODShiLtJ_T0019342.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43593097 43595034 + Map4k4 protein_coding retained_intron MGP_NODShiLtJ_T0019343.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43599677 43600524 + Map4k4 protein_coding retained_intron MGP_NODShiLtJ_T0019344.1 MGP_NODShiLtJ_G0015829.1 mouse_genomes_project 1 43609395 43610593 + Map4k4 protein_coding retained_intron MGP_NODShiLtJ_T0000369.1 MGP_NODShiLtJ_G0000307.1 mouse_genomes_project 1 9955746 9958217 + TEC TEC MGP_NODShiLtJ_T0022391.1 MGP_NODShiLtJ_G0016452.1 mouse_genomes_project 1 174951697 174967320 + Trmt1l protein_coding retained_intron MGP_NODShiLtJ_T0022392.1 MGP_NODShiLtJ_G0016452.1 mouse_genomes_project 1 174951697 174984783 + MGP_NODShiLtJ_P0022392 Trmt1l protein_coding protein_coding MGP_NODShiLtJ_T0022393.1 MGP_NODShiLtJ_G0016452.1 mouse_genomes_project 1 174951792 174960228 + Trmt1l protein_coding retained_intron MGP_NODShiLtJ_T0022394.1 MGP_NODShiLtJ_G0016452.1 mouse_genomes_project 1 174951797 174974514 + Trmt1l protein_coding retained_intron MGP_NODShiLtJ_T0022395.1 MGP_NODShiLtJ_G0016452.1 mouse_genomes_project 1 174951803 174953791 + Trmt1l protein_coding retained_intron MGP_NODShiLtJ_T0022396.1 MGP_NODShiLtJ_G0016452.1 mouse_genomes_project 1 174951822 174960228 + Trmt1l protein_coding retained_intron MGP_NODShiLtJ_T0022397.1 MGP_NODShiLtJ_G0016452.1 mouse_genomes_project 1 174951861 174984783 + MGP_NODShiLtJ_P0022397 Trmt1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002805.1 MGP_NODShiLtJ_G0002650.1 mouse_genomes_project 1 103249532 103253942 - Gm29100 antisense antisense MGP_NODShiLtJ_T0022863.1 MGP_NODShiLtJ_G0016535.1 mouse_genomes_project 1 187542037 187575249 - MGP_NODShiLtJ_P0022863 Fmo1 protein_coding protein_coding MGP_NODShiLtJ_T0022864.1 MGP_NODShiLtJ_G0016535.1 mouse_genomes_project 1 187542243 187542950 - Fmo1 protein_coding processed_transcript MGP_NODShiLtJ_T0022865.1 MGP_NODShiLtJ_G0016535.1 mouse_genomes_project 1 187542526 187547145 - Fmo1 protein_coding processed_transcript MGP_NODShiLtJ_T0022866.1 MGP_NODShiLtJ_G0016535.1 mouse_genomes_project 1 187544040 187547145 - Fmo1 protein_coding retained_intron MGP_NODShiLtJ_T0022867.1 MGP_NODShiLtJ_G0016535.1 mouse_genomes_project 1 187546277 187567617 - MGP_NODShiLtJ_P0022867 Fmo1 protein_coding protein_coding MGP_NODShiLtJ_T0022868.1 MGP_NODShiLtJ_G0016535.1 mouse_genomes_project 1 187548742 187567475 - MGP_NODShiLtJ_P0022868 Fmo1 protein_coding protein_coding MGP_NODShiLtJ_T0022869.1 MGP_NODShiLtJ_G0016535.1 mouse_genomes_project 1 187548768 187567369 - MGP_NODShiLtJ_P0022869 Fmo1 protein_coding protein_coding MGP_NODShiLtJ_T0012093.1 MGP_NODShiLtJ_G0010201.1 mouse_genomes_project 1 137506267 137506931 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099775.1 MGP_NODShiLtJ_G0038169.1 mouse_genomes_project 1 97039147 97039280 - Snora75 snoRNA snoRNA MGP_NODShiLtJ_T0011789.1 MGP_NODShiLtJ_G0009897.1 mouse_genomes_project 1 16655013 16655499 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002814.1 MGP_NODShiLtJ_G0002659.1 mouse_genomes_project 1 109440279 109480703 + Panct2 antisense antisense MGP_NODShiLtJ_T0002815.1 MGP_NODShiLtJ_G0002659.1 mouse_genomes_project 1 109441374 109450384 + Panct2 antisense antisense MGP_NODShiLtJ_T0002816.1 MGP_NODShiLtJ_G0002659.1 mouse_genomes_project 1 109441386 109447051 + Panct2 antisense antisense MGP_NODShiLtJ_T0020916.1 MGP_NODShiLtJ_G0016132.1 mouse_genomes_project 1 98109222 98159099 + MGP_NODShiLtJ_P0020916 Efhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020917.1 MGP_NODShiLtJ_G0016132.1 mouse_genomes_project 1 98109222 98159102 + MGP_NODShiLtJ_P0020917 Efhd1 protein_coding protein_coding MGP_NODShiLtJ_T0020918.1 MGP_NODShiLtJ_G0016132.1 mouse_genomes_project 1 98157488 98158005 + Efhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0005846.1 MGP_NODShiLtJ_G0004898.1 mouse_genomes_project 1 153260869 153273248 + Gm1627 lincRNA lincRNA MGP_NODShiLtJ_T0009401.1 MGP_NODShiLtJ_G0007534.1 mouse_genomes_project 1 67935611 67935717 - Gm23762 miRNA miRNA MGP_NODShiLtJ_T0021802.1 MGP_NODShiLtJ_G0016329.1 mouse_genomes_project 1 150714447 150740573 + MGP_NODShiLtJ_P0021802 Rab7b protein_coding protein_coding MGP_NODShiLtJ_T0021803.1 MGP_NODShiLtJ_G0016329.1 mouse_genomes_project 1 150714459 150737886 + MGP_NODShiLtJ_P0021803 Rab7b protein_coding protein_coding MGP_NODShiLtJ_T0021804.1 MGP_NODShiLtJ_G0016329.1 mouse_genomes_project 1 150714490 150736798 + MGP_NODShiLtJ_P0021804 Rab7b protein_coding protein_coding MGP_NODShiLtJ_T0021805.1 MGP_NODShiLtJ_G0016329.1 mouse_genomes_project 1 150714518 150736965 + MGP_NODShiLtJ_P0021805 Rab7b protein_coding protein_coding MGP_NODShiLtJ_T0021806.1 MGP_NODShiLtJ_G0016329.1 mouse_genomes_project 1 150722312 150731282 + Rab7b protein_coding processed_transcript MGP_NODShiLtJ_T0020875.1 MGP_NODShiLtJ_G0016121.1 mouse_genomes_project 1 97297218 97324556 + MGP_NODShiLtJ_P0020875 Cops7b protein_coding protein_coding MGP_NODShiLtJ_T0020876.1 MGP_NODShiLtJ_G0016121.1 mouse_genomes_project 1 97297252 97304452 + MGP_NODShiLtJ_P0020876 Cops7b protein_coding protein_coding MGP_NODShiLtJ_T0020877.1 MGP_NODShiLtJ_G0016121.1 mouse_genomes_project 1 97302258 97321661 + MGP_NODShiLtJ_P0020877 Cops7b protein_coding protein_coding MGP_NODShiLtJ_T0020878.1 MGP_NODShiLtJ_G0016121.1 mouse_genomes_project 1 97302289 97321487 + MGP_NODShiLtJ_P0020878 Cops7b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020879.1 MGP_NODShiLtJ_G0016121.1 mouse_genomes_project 1 97302300 97322139 + MGP_NODShiLtJ_P0020879 Cops7b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020880.1 MGP_NODShiLtJ_G0016121.1 mouse_genomes_project 1 97311898 97316325 + Cops7b protein_coding processed_transcript MGP_NODShiLtJ_T0002761.1 MGP_NODShiLtJ_G0002618.1 mouse_genomes_project 1 65232353 65294138 - Gm15759 antisense antisense MGP_NODShiLtJ_T0002869.1 MGP_NODShiLtJ_G0002697.1 mouse_genomes_project 1 177456348 177462120 - Gm28513 antisense antisense MGP_NODShiLtJ_T0019750.1 MGP_NODShiLtJ_G0015910.1 mouse_genomes_project 1 64997590 65077819 + MGP_NODShiLtJ_P0019750 Aox1 protein_coding protein_coding MGP_NODShiLtJ_T0019751.1 MGP_NODShiLtJ_G0015910.1 mouse_genomes_project 1 64997623 65041118 + Aox1 protein_coding retained_intron MGP_NODShiLtJ_T0005818.1 MGP_NODShiLtJ_G0004875.1 mouse_genomes_project 1 138096925 138099576 + 1700012E03Rik lincRNA lincRNA MGP_NODShiLtJ_T0000485.1 MGP_NODShiLtJ_G0000421.1 mouse_genomes_project 1 70355259 70357807 + TEC TEC MGP_NODShiLtJ_T0000597.1 MGP_NODShiLtJ_G0000533.1 mouse_genomes_project 1 146570310 146576290 - TEC TEC MGP_NODShiLtJ_T0023603.1 MGP_NODShiLtJ_G0016727.1 mouse_genomes_project 1 206216076 206236645 - MGP_NODShiLtJ_P0023603 Tfb2m protein_coding protein_coding MGP_NODShiLtJ_T0023605.1 MGP_NODShiLtJ_G0016727.1 mouse_genomes_project 1 206219309 206224045 - Tfb2m protein_coding processed_transcript MGP_NODShiLtJ_T0023606.1 MGP_NODShiLtJ_G0016727.1 mouse_genomes_project 1 206219670 206224075 - Tfb2m protein_coding processed_transcript MGP_NODShiLtJ_T0023607.1 MGP_NODShiLtJ_G0016727.1 mouse_genomes_project 1 206221705 206236595 - Tfb2m protein_coding processed_transcript MGP_NODShiLtJ_T0023608.1 MGP_NODShiLtJ_G0016727.1 mouse_genomes_project 1 206224032 206236270 - Tfb2m protein_coding processed_transcript MGP_NODShiLtJ_T0021304.1 MGP_NODShiLtJ_G0016215.1 mouse_genomes_project 1 105245357 105256687 + MGP_NODShiLtJ_P0021304 Bok protein_coding protein_coding MGP_NODShiLtJ_T0021305.1 MGP_NODShiLtJ_G0016215.1 mouse_genomes_project 1 105245399 105256133 + MGP_NODShiLtJ_P0021305 Bok protein_coding protein_coding MGP_NODShiLtJ_T0021306.1 MGP_NODShiLtJ_G0016215.1 mouse_genomes_project 1 105245960 105255026 + MGP_NODShiLtJ_P0021306 Bok protein_coding protein_coding MGP_NODShiLtJ_T0021307.1 MGP_NODShiLtJ_G0016215.1 mouse_genomes_project 1 105248906 105256392 + MGP_NODShiLtJ_P0021307 Bok protein_coding protein_coding MGP_NODShiLtJ_T0021308.1 MGP_NODShiLtJ_G0016215.1 mouse_genomes_project 1 105254771 105256378 + Bok protein_coding processed_transcript MGP_NODShiLtJ_T0099763.1 MGP_NODShiLtJ_G0038157.1 mouse_genomes_project 1 66889608 66889689 + Gm26287 snoRNA snoRNA MGP_NODShiLtJ_T0022690.1 MGP_NODShiLtJ_G0016506.1 mouse_genomes_project 1 182942268 183215943 - MGP_NODShiLtJ_P0022690 Pappa2 protein_coding protein_coding MGP_NODShiLtJ_T0022691.1 MGP_NODShiLtJ_G0016506.1 mouse_genomes_project 1 183001443 183056960 - MGP_NODShiLtJ_P0022691 Pappa2 protein_coding protein_coding MGP_NODShiLtJ_T0022692.1 MGP_NODShiLtJ_G0016506.1 mouse_genomes_project 1 183056764 183091616 - Pappa2 protein_coding retained_intron MGP_NODShiLtJ_T0022693.1 MGP_NODShiLtJ_G0016506.1 mouse_genomes_project 1 183073843 183083783 - Pappa2 protein_coding processed_transcript MGP_NODShiLtJ_T0022694.1 MGP_NODShiLtJ_G0016506.1 mouse_genomes_project 1 183215651 183217917 - Pappa2 protein_coding processed_transcript MGP_NODShiLtJ_T0022695.1 MGP_NODShiLtJ_G0016506.1 mouse_genomes_project 1 183215702 183238776 - Pappa2 protein_coding processed_transcript MGP_NODShiLtJ_T0018895.1 MGP_NODShiLtJ_G0015747.1 mouse_genomes_project 1 21355169 22076964 - MGP_NODShiLtJ_P0018895 Kcnq5 protein_coding protein_coding MGP_NODShiLtJ_T0018896.1 MGP_NODShiLtJ_G0015747.1 mouse_genomes_project 1 21355174 22076094 - MGP_NODShiLtJ_P0018896 Kcnq5 protein_coding protein_coding MGP_NODShiLtJ_T0018897.1 MGP_NODShiLtJ_G0015747.1 mouse_genomes_project 1 21359056 22075759 - MGP_NODShiLtJ_P0018897 Kcnq5 protein_coding protein_coding MGP_NODShiLtJ_T0018898.1 MGP_NODShiLtJ_G0015747.1 mouse_genomes_project 1 21359056 22075759 - MGP_NODShiLtJ_P0018898 Kcnq5 protein_coding protein_coding MGP_NODShiLtJ_T0018899.1 MGP_NODShiLtJ_G0015747.1 mouse_genomes_project 1 21359056 22075759 - MGP_NODShiLtJ_P0018899 Kcnq5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018900.1 MGP_NODShiLtJ_G0015747.1 mouse_genomes_project 1 21456467 22075817 - Kcnq5 protein_coding retained_intron MGP_NODShiLtJ_T0018901.1 MGP_NODShiLtJ_G0015747.1 mouse_genomes_project 1 21508196 21633509 - MGP_NODShiLtJ_P0018901 Kcnq5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018902.1 MGP_NODShiLtJ_G0015747.1 mouse_genomes_project 1 21595685 21943269 - Kcnq5 protein_coding processed_transcript MGP_NODShiLtJ_T0098548.1 MGP_NODShiLtJ_G0036942.1 mouse_genomes_project 1 110900135 110900242 + Gm24465 snRNA snRNA MGP_NODShiLtJ_T0002745.1 MGP_NODShiLtJ_G0002605.1 mouse_genomes_project 1 44204665 44213380 - Gm35801 antisense antisense MGP_NODShiLtJ_T0002746.1 MGP_NODShiLtJ_G0002605.1 mouse_genomes_project 1 44204685 44213366 - Gm35801 antisense antisense MGP_NODShiLtJ_T0098242.1 MGP_NODShiLtJ_G0036653.1 mouse_genomes_project 1 184695089 184703170 - Gm37529 sense_intronic sense_intronic MGP_NODShiLtJ_T0002787.1 MGP_NODShiLtJ_G0002633.1 mouse_genomes_project 1 84252947 84255406 - Gm29539 antisense antisense MGP_NODShiLtJ_T0011151.1 MGP_NODShiLtJ_G0009284.1 mouse_genomes_project 1 218040270 218040583 - Gm23153 misc_RNA misc_RNA MGP_NODShiLtJ_T0005813.1 MGP_NODShiLtJ_G0004872.1 mouse_genomes_project 1 136835504 136846092 + Gm29455 lincRNA lincRNA MGP_NODShiLtJ_T0005814.1 MGP_NODShiLtJ_G0004872.1 mouse_genomes_project 1 136835546 136895600 + Gm29455 lincRNA lincRNA MGP_NODShiLtJ_T0005684.1 MGP_NODShiLtJ_G0004767.1 mouse_genomes_project 1 66643377 66647622 - Gm26813 lincRNA lincRNA MGP_NODShiLtJ_T0011968.1 MGP_NODShiLtJ_G0010076.1 mouse_genomes_project 1 74867916 74870450 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016896.1 MGP_NODShiLtJ_G0014978.1 mouse_genomes_project 1 101252484 101254113 + D130058E05Rik processed_transcript antisense MGP_NODShiLtJ_T0016897.1 MGP_NODShiLtJ_G0014978.1 mouse_genomes_project 1 101252511 101255540 + D130058E05Rik processed_transcript retained_intron MGP_NODShiLtJ_T0002759.1 MGP_NODShiLtJ_G0002616.1 mouse_genomes_project 1 61948674 61958825 + Gm10561 antisense antisense MGP_NODShiLtJ_T0000345.1 MGP_NODShiLtJ_G0000283.1 mouse_genomes_project 1 500877 503694 - TEC TEC MGP_NODShiLtJ_T0012127.1 MGP_NODShiLtJ_G0010235.1 mouse_genomes_project 1 156363592 156363931 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005737.1 MGP_NODShiLtJ_G0004806.1 mouse_genomes_project 1 86472833 86620340 - Gm816 lincRNA lincRNA MGP_NODShiLtJ_T0000628.1 MGP_NODShiLtJ_G0000563.1 mouse_genomes_project 1 155544331 155546584 + TEC TEC MGP_NODShiLtJ_T0021452.1 MGP_NODShiLtJ_G0016254.1 mouse_genomes_project 1 122241068 122257632 + MGP_NODShiLtJ_P0021452 Serpinb2 protein_coding protein_coding MGP_NODShiLtJ_T0021453.1 MGP_NODShiLtJ_G0016254.1 mouse_genomes_project 1 122241142 122257626 + MGP_NODShiLtJ_P0021453 Serpinb2 protein_coding protein_coding MGP_NODShiLtJ_T0021454.1 MGP_NODShiLtJ_G0016254.1 mouse_genomes_project 1 122252949 122267466 + MGP_NODShiLtJ_P0021454 Serpinb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021455.1 MGP_NODShiLtJ_G0016254.1 mouse_genomes_project 1 122256150 122264569 + MGP_NODShiLtJ_P0021455 Serpinb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021037.1 MGP_NODShiLtJ_G0016159.1 mouse_genomes_project 1 100755405 101218805 + MGP_NODShiLtJ_P0021037 Agap1 protein_coding protein_coding MGP_NODShiLtJ_T0021038.1 MGP_NODShiLtJ_G0016159.1 mouse_genomes_project 1 100755473 101211183 + MGP_NODShiLtJ_P0021038 Agap1 protein_coding protein_coding MGP_NODShiLtJ_T0021039.1 MGP_NODShiLtJ_G0016159.1 mouse_genomes_project 1 100755855 100760538 + Agap1 protein_coding retained_intron MGP_NODShiLtJ_T0021040.1 MGP_NODShiLtJ_G0016159.1 mouse_genomes_project 1 100887175 101216465 + MGP_NODShiLtJ_P0021040 Agap1 protein_coding protein_coding MGP_NODShiLtJ_T0021041.1 MGP_NODShiLtJ_G0016159.1 mouse_genomes_project 1 100887686 101210076 + MGP_NODShiLtJ_P0021041 Agap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012107.1 MGP_NODShiLtJ_G0010215.1 mouse_genomes_project 1 142012999 142013881 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023061.1 MGP_NODShiLtJ_G0016580.1 mouse_genomes_project 1 192280935 192352535 - MGP_NODShiLtJ_P0023061 Uck2 protein_coding protein_coding MGP_NODShiLtJ_T0023062.1 MGP_NODShiLtJ_G0016580.1 mouse_genomes_project 1 192283944 192352099 - MGP_NODShiLtJ_P0023062 Uck2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023063.1 MGP_NODShiLtJ_G0016580.1 mouse_genomes_project 1 192284330 192294937 - MGP_NODShiLtJ_P0023063 Uck2 protein_coding protein_coding MGP_NODShiLtJ_T0023064.1 MGP_NODShiLtJ_G0016580.1 mouse_genomes_project 1 192284435 192302502 - MGP_NODShiLtJ_P0023064 Uck2 protein_coding protein_coding MGP_NODShiLtJ_T0023065.1 MGP_NODShiLtJ_G0016580.1 mouse_genomes_project 1 192287994 192351816 - MGP_NODShiLtJ_P0023065 Uck2 protein_coding protein_coding MGP_NODShiLtJ_T0023066.1 MGP_NODShiLtJ_G0016580.1 mouse_genomes_project 1 192292793 192352093 - MGP_NODShiLtJ_P0023066 Uck2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023067.1 MGP_NODShiLtJ_G0016580.1 mouse_genomes_project 1 192295583 192351922 - Uck2 protein_coding processed_transcript MGP_NODShiLtJ_T0023055.1 MGP_NODShiLtJ_G0016579.1 mouse_genomes_project 1 192051685 192149262 + MGP_NODShiLtJ_P0023055 Fam78b protein_coding protein_coding MGP_NODShiLtJ_T0023056.1 MGP_NODShiLtJ_G0016579.1 mouse_genomes_project 1 192051685 192149262 + MGP_NODShiLtJ_P0023056 Fam78b protein_coding protein_coding MGP_NODShiLtJ_T0023057.1 MGP_NODShiLtJ_G0016579.1 mouse_genomes_project 1 192051700 192147038 + MGP_NODShiLtJ_P0023057 Fam78b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023058.1 MGP_NODShiLtJ_G0016579.1 mouse_genomes_project 1 192051734 192139105 + MGP_NODShiLtJ_P0023058 Fam78b protein_coding protein_coding MGP_NODShiLtJ_T0023059.1 MGP_NODShiLtJ_G0016579.1 mouse_genomes_project 1 192051848 192146685 + MGP_NODShiLtJ_P0023059 Fam78b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023060.1 MGP_NODShiLtJ_G0016579.1 mouse_genomes_project 1 192051857 192148969 + MGP_NODShiLtJ_P0023060 Fam78b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023068.1 MGP_NODShiLtJ_G0016581.1 mouse_genomes_project 1 192389306 192420857 + MGP_NODShiLtJ_P0023068 Tmco1 protein_coding protein_coding MGP_NODShiLtJ_T0023069.1 MGP_NODShiLtJ_G0016581.1 mouse_genomes_project 1 192389598 192420857 + MGP_NODShiLtJ_P0023069 Tmco1 protein_coding protein_coding MGP_NODShiLtJ_T0023070.1 MGP_NODShiLtJ_G0016581.1 mouse_genomes_project 1 192389664 192423986 + MGP_NODShiLtJ_P0023070 Tmco1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023071.1 MGP_NODShiLtJ_G0016581.1 mouse_genomes_project 1 192400221 192420672 + MGP_NODShiLtJ_P0023071 Tmco1 protein_coding protein_coding MGP_NODShiLtJ_T0098235.1 MGP_NODShiLtJ_G0036646.1 mouse_genomes_project 1 157635202 157636447 + Gm26930 sense_intronic sense_intronic MGP_NODShiLtJ_T0000591.1 MGP_NODShiLtJ_G0000527.1 mouse_genomes_project 1 144360013 144362711 - TEC TEC MGP_NODShiLtJ_T0011776.1 MGP_NODShiLtJ_G0009884.1 mouse_genomes_project 1 11306412 11308127 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021075.1 MGP_NODShiLtJ_G0016168.1 mouse_genomes_project 1 102364876 102379102 - MGP_NODShiLtJ_P0021075 Rab17 protein_coding protein_coding MGP_NODShiLtJ_T0021076.1 MGP_NODShiLtJ_G0016168.1 mouse_genomes_project 1 102364878 102377108 - MGP_NODShiLtJ_P0021076 Rab17 protein_coding protein_coding MGP_NODShiLtJ_T0021077.1 MGP_NODShiLtJ_G0016168.1 mouse_genomes_project 1 102365474 102378989 - Rab17 protein_coding processed_transcript MGP_NODShiLtJ_T0021078.1 MGP_NODShiLtJ_G0016168.1 mouse_genomes_project 1 102365597 102377058 - Rab17 protein_coding processed_transcript MGP_NODShiLtJ_T0021079.1 MGP_NODShiLtJ_G0016168.1 mouse_genomes_project 1 102366744 102379085 - MGP_NODShiLtJ_P0021079 Rab17 protein_coding protein_coding MGP_NODShiLtJ_T0011133.1 MGP_NODShiLtJ_G0009266.1 mouse_genomes_project 1 56070604 56070736 - Gm27330 misc_RNA misc_RNA MGP_NODShiLtJ_T0000595.1 MGP_NODShiLtJ_G0000531.1 mouse_genomes_project 1 145825579 145830365 + TEC TEC MGP_NODShiLtJ_T0002940.1 MGP_NODShiLtJ_G0002756.1 mouse_genomes_project 1 217692891 217693855 + Gm28172 antisense antisense MGP_NODShiLtJ_T0023531.1 MGP_NODShiLtJ_G0016712.1 mouse_genomes_project 1 202125204 202127101 + MGP_NODShiLtJ_P0023531 Gm38100 protein_coding protein_coding MGP_NODShiLtJ_T0023532.1 MGP_NODShiLtJ_G0016712.1 mouse_genomes_project 1 202125245 202126574 + MGP_NODShiLtJ_P0023532 Gm38100 protein_coding protein_coding MGP_NODShiLtJ_T0005980.1 MGP_NODShiLtJ_G0005002.1 mouse_genomes_project 1 213987436 213990955 + A430105J06Rik lincRNA lincRNA MGP_NODShiLtJ_T0098541.1 MGP_NODShiLtJ_G0036935.1 mouse_genomes_project 1 87563185 87563349 - Gm26263 snRNA snRNA MGP_NODShiLtJ_T0000488.1 MGP_NODShiLtJ_G0000424.1 mouse_genomes_project 1 74750487 74752222 - TEC TEC MGP_NODShiLtJ_T0012215.1 MGP_NODShiLtJ_G0010323.1 mouse_genomes_project 1 197271571 197272123 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023305.1 MGP_NODShiLtJ_G0016639.1 mouse_genomes_project 1 197310876 197345854 + MGP_NODShiLtJ_P0023305 Slamf1 protein_coding protein_coding MGP_NODShiLtJ_T0023306.1 MGP_NODShiLtJ_G0016639.1 mouse_genomes_project 1 197310904 197339923 + Slamf1 protein_coding retained_intron MGP_NODShiLtJ_T0023307.1 MGP_NODShiLtJ_G0016639.1 mouse_genomes_project 1 197317649 197344294 + MGP_NODShiLtJ_P0023307 Slamf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012252.1 MGP_NODShiLtJ_G0010360.1 mouse_genomes_project 1 219671323 219671555 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021176.1 MGP_NODShiLtJ_G0016186.1 mouse_genomes_project 1 103958851 103959891 - MGP_NODShiLtJ_P0021176 Olfr1416 protein_coding protein_coding MGP_NODShiLtJ_T0021177.1 MGP_NODShiLtJ_G0016186.1 mouse_genomes_project 1 103958851 103964731 - MGP_NODShiLtJ_P0021177 Olfr1416 protein_coding protein_coding MGP_NODShiLtJ_T0020965.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98651366 98667929 + MGP_NODShiLtJ_P0020965 Atg16l1 protein_coding protein_coding MGP_NODShiLtJ_T0020966.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98651509 98692352 + MGP_NODShiLtJ_P0020966 Atg16l1 protein_coding protein_coding MGP_NODShiLtJ_T0020967.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98651552 98665958 + Atg16l1 protein_coding retained_intron MGP_NODShiLtJ_T0020968.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98651572 98684344 + Atg16l1 protein_coding retained_intron MGP_NODShiLtJ_T0020969.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98651572 98692346 + MGP_NODShiLtJ_P0020969 Atg16l1 protein_coding protein_coding MGP_NODShiLtJ_T0020970.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98651582 98692349 + MGP_NODShiLtJ_P0020970 Atg16l1 protein_coding protein_coding MGP_NODShiLtJ_T0020971.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98651584 98692349 + Atg16l1 protein_coding retained_intron MGP_NODShiLtJ_T0020972.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98651589 98664612 + Atg16l1 protein_coding retained_intron MGP_NODShiLtJ_T0020973.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98663529 98672330 + Atg16l1 protein_coding retained_intron MGP_NODShiLtJ_T0020974.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98672752 98676150 + Atg16l1 protein_coding retained_intron MGP_NODShiLtJ_T0020975.1 MGP_NODShiLtJ_G0016139.1 mouse_genomes_project 1 98675649 98686706 + Atg16l1 protein_coding retained_intron MGP_NODShiLtJ_T0000587.1 MGP_NODShiLtJ_G0000523.1 mouse_genomes_project 1 141673860 141678108 - TEC TEC MGP_NODShiLtJ_T0099749.1 MGP_NODShiLtJ_G0038143.1 mouse_genomes_project 1 43061424 43061640 + Gm24826 snoRNA snoRNA MGP_NODShiLtJ_T0000490.1 MGP_NODShiLtJ_G0000426.1 mouse_genomes_project 1 74850886 74853771 - TEC TEC MGP_NODShiLtJ_T0009478.1 MGP_NODShiLtJ_G0007611.1 mouse_genomes_project 1 222930549 222930637 + Mir29c miRNA miRNA MGP_NODShiLtJ_T0009442.1 MGP_NODShiLtJ_G0007575.1 mouse_genomes_project 1 153011601 153011689 - Mir6903 miRNA miRNA MGP_NODShiLtJ_T0011785.1 MGP_NODShiLtJ_G0009893.1 mouse_genomes_project 1 15845727 15846145 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009438.1 MGP_NODShiLtJ_G0007571.1 mouse_genomes_project 1 146821475 146821545 + Mir128-1 miRNA miRNA MGP_NODShiLtJ_T0022269.1 MGP_NODShiLtJ_G0016427.1 mouse_genomes_project 1 159428692 159454261 - MGP_NODShiLtJ_P0022269 Cfhr1 protein_coding protein_coding MGP_NODShiLtJ_T0012201.1 MGP_NODShiLtJ_G0010309.1 mouse_genomes_project 1 191817113 191818708 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021853.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151311076 151381625 + MGP_NODShiLtJ_P0021853 Lemd1 protein_coding protein_coding MGP_NODShiLtJ_T0021854.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151311100 151379780 + MGP_NODShiLtJ_P0021854 Lemd1 protein_coding protein_coding MGP_NODShiLtJ_T0021855.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151311102 151329189 + Lemd1 protein_coding processed_transcript MGP_NODShiLtJ_T0021856.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151320606 151325426 + Lemd1 protein_coding processed_transcript MGP_NODShiLtJ_T0021857.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151323494 151324152 + Lemd1 protein_coding processed_transcript MGP_NODShiLtJ_T0021858.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151348133 151379587 + MGP_NODShiLtJ_P0021858 Lemd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021859.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151348162 151379407 + MGP_NODShiLtJ_P0021859 Lemd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021860.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151350183 151351618 + Lemd1 protein_coding retained_intron MGP_NODShiLtJ_T0021861.1 MGP_NODShiLtJ_G0016339.1 mouse_genomes_project 1 151350183 151379432 + MGP_NODShiLtJ_P0021861 Lemd1 protein_coding protein_coding MGP_NODShiLtJ_T0002909.1 MGP_NODShiLtJ_G0002729.1 mouse_genomes_project 1 197779328 197779988 + Gm17224 antisense antisense MGP_NODShiLtJ_T0012200.1 MGP_NODShiLtJ_G0010308.1 mouse_genomes_project 1 191468593 191468764 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002882.1 MGP_NODShiLtJ_G0002709.1 mouse_genomes_project 1 186615395 186676068 + Gm38304 antisense antisense MGP_NODShiLtJ_T0005936.1 MGP_NODShiLtJ_G0004970.1 mouse_genomes_project 1 202681133 202793525 - lincRNA lincRNA MGP_NODShiLtJ_T0020882.1 MGP_NODShiLtJ_G0016123.1 mouse_genomes_project 1 97431054 97492847 + protein_coding processed_transcript MGP_NODShiLtJ_T0020883.1 MGP_NODShiLtJ_G0016123.1 mouse_genomes_project 1 97431065 97866867 + MGP_NODShiLtJ_P0020883 protein_coding protein_coding MGP_NODShiLtJ_T0020884.1 MGP_NODShiLtJ_G0016123.1 mouse_genomes_project 1 97431074 97649780 + protein_coding retained_intron MGP_NODShiLtJ_T0020885.1 MGP_NODShiLtJ_G0016123.1 mouse_genomes_project 1 97431074 97865967 + MGP_NODShiLtJ_P0020885 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020886.1 MGP_NODShiLtJ_G0016123.1 mouse_genomes_project 1 97431089 97866864 + MGP_NODShiLtJ_P0020886 protein_coding protein_coding MGP_NODShiLtJ_T0020887.1 MGP_NODShiLtJ_G0016123.1 mouse_genomes_project 1 97622618 97623353 + protein_coding retained_intron MGP_NODShiLtJ_T0098595.1 MGP_NODShiLtJ_G0036989.1 mouse_genomes_project 1 219431016 219431120 - Gm22446 snRNA snRNA MGP_NODShiLtJ_T0097872.1 MGP_NODShiLtJ_G0036284.1 mouse_genomes_project 1 178118932 178119052 - n-R5s220 rRNA rRNA MGP_NODShiLtJ_T0021887.1 MGP_NODShiLtJ_G0016347.1 mouse_genomes_project 1 151648415 151663192 - MGP_NODShiLtJ_P0021887 Cntn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021888.1 MGP_NODShiLtJ_G0016347.1 mouse_genomes_project 1 151648415 151654623 - MGP_NODShiLtJ_P0021888 Cntn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021889.1 MGP_NODShiLtJ_G0016347.1 mouse_genomes_project 1 151650760 151683787 - Cntn2 protein_coding retained_intron MGP_NODShiLtJ_T0021890.1 MGP_NODShiLtJ_G0016347.1 mouse_genomes_project 1 151650764 151683836 - MGP_NODShiLtJ_P0021890 Cntn2 protein_coding protein_coding MGP_NODShiLtJ_T0021891.1 MGP_NODShiLtJ_G0016347.1 mouse_genomes_project 1 151650774 151683762 - Cntn2 protein_coding retained_intron MGP_NODShiLtJ_T0021892.1 MGP_NODShiLtJ_G0016347.1 mouse_genomes_project 1 151655986 151658069 - Cntn2 protein_coding retained_intron MGP_NODShiLtJ_T0021893.1 MGP_NODShiLtJ_G0016347.1 mouse_genomes_project 1 151668797 151673683 - MGP_NODShiLtJ_P0021893 Cntn2 protein_coding protein_coding MGP_NODShiLtJ_T0021894.1 MGP_NODShiLtJ_G0016347.1 mouse_genomes_project 1 151673455 151684153 - MGP_NODShiLtJ_P0021894 Cntn2 protein_coding protein_coding MGP_NODShiLtJ_T0023730.1 MGP_NODShiLtJ_G0016751.1 mouse_genomes_project 1 207967546 208032066 - MGP_NODShiLtJ_P0023730 Nvl protein_coding protein_coding MGP_NODShiLtJ_T0023731.1 MGP_NODShiLtJ_G0016751.1 mouse_genomes_project 1 207971833 207973950 - Nvl protein_coding processed_transcript MGP_NODShiLtJ_T0023732.1 MGP_NODShiLtJ_G0016751.1 mouse_genomes_project 1 207973440 207975707 - Nvl protein_coding retained_intron MGP_NODShiLtJ_T0023733.1 MGP_NODShiLtJ_G0016751.1 mouse_genomes_project 1 207976163 207990450 - Nvl protein_coding retained_intron MGP_NODShiLtJ_T0023734.1 MGP_NODShiLtJ_G0016751.1 mouse_genomes_project 1 208024086 208026546 - Nvl protein_coding retained_intron MGP_NODShiLtJ_T0012204.1 MGP_NODShiLtJ_G0010312.1 mouse_genomes_project 1 192369323 192369690 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005945.1 MGP_NODShiLtJ_G0004978.1 mouse_genomes_project 1 207937359 207942640 + lincRNA lincRNA MGP_NODShiLtJ_T0000762.1 MGP_NODShiLtJ_G0000694.1 mouse_genomes_project 1 213359465 213359953 + TEC TEC MGP_NODShiLtJ_T0012184.1 MGP_NODShiLtJ_G0010292.1 mouse_genomes_project 1 183748137 183748347 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098230.1 MGP_NODShiLtJ_G0036641.1 mouse_genomes_project 1 100874103 100881971 + Gm28499 sense_intronic sense_intronic MGP_NODShiLtJ_T0023990.1 MGP_NODShiLtJ_G0016803.1 mouse_genomes_project 1 218547082 218578750 - MGP_NODShiLtJ_P0023990 Vash2 protein_coding protein_coding MGP_NODShiLtJ_T0023991.1 MGP_NODShiLtJ_G0016803.1 mouse_genomes_project 1 218547084 218578456 - MGP_NODShiLtJ_P0023991 Vash2 protein_coding protein_coding MGP_NODShiLtJ_T0023992.1 MGP_NODShiLtJ_G0016803.1 mouse_genomes_project 1 218572355 218578668 - Vash2 protein_coding processed_transcript MGP_NODShiLtJ_T0021015.1 MGP_NODShiLtJ_G0016149.1 mouse_genomes_project 1 99203452 99344396 + MGP_NODShiLtJ_P0021015 Ugt1a2 protein_coding protein_coding MGP_NODShiLtJ_T0009382.1 MGP_NODShiLtJ_G0007515.1 mouse_genomes_project 1 23588540 23588624 + Mir30c-2 miRNA miRNA MGP_NODShiLtJ_T0011878.1 MGP_NODShiLtJ_G0009986.1 mouse_genomes_project 1 49115298 49116043 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011735.1 MGP_NODShiLtJ_G0009843.1 mouse_genomes_project 1 2015354 2016290 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000502.1 MGP_NODShiLtJ_G0000438.1 mouse_genomes_project 1 79283432 79287427 - TEC TEC MGP_NODShiLtJ_T0000627.1 MGP_NODShiLtJ_G0000562.1 mouse_genomes_project 1 155373789 155376485 - TEC TEC MGP_NODShiLtJ_T0000645.1 MGP_NODShiLtJ_G0000579.1 mouse_genomes_project 1 158863356 158866150 + TEC TEC MGP_NODShiLtJ_T0005771.1 MGP_NODShiLtJ_G0004835.1 mouse_genomes_project 1 101603458 101608304 - Gm28721 lincRNA lincRNA MGP_NODShiLtJ_T0000427.1 MGP_NODShiLtJ_G0000363.1 mouse_genomes_project 1 36788445 36788786 + TEC TEC MGP_NODShiLtJ_T0023439.1 MGP_NODShiLtJ_G0016675.1 mouse_genomes_project 1 199079567 199199890 + MGP_NODShiLtJ_P0023439 Aim2 protein_coding protein_coding MGP_NODShiLtJ_T0023440.1 MGP_NODShiLtJ_G0016675.1 mouse_genomes_project 1 199152030 199160473 + Aim2 protein_coding processed_transcript MGP_NODShiLtJ_T0023441.1 MGP_NODShiLtJ_G0016675.1 mouse_genomes_project 1 199153394 199193508 + MGP_NODShiLtJ_P0023441 Aim2 protein_coding protein_coding MGP_NODShiLtJ_T0023442.1 MGP_NODShiLtJ_G0016675.1 mouse_genomes_project 1 199188771 199189396 + MGP_NODShiLtJ_P0023442 Aim2 protein_coding protein_coding MGP_NODShiLtJ_T0023443.1 MGP_NODShiLtJ_G0016675.1 mouse_genomes_project 1 199189154 199195808 + Aim2 protein_coding processed_transcript MGP_NODShiLtJ_T0023444.1 MGP_NODShiLtJ_G0016675.1 mouse_genomes_project 1 199189154 199199882 + MGP_NODShiLtJ_P0023444 Aim2 protein_coding protein_coding MGP_NODShiLtJ_T0023445.1 MGP_NODShiLtJ_G0016675.1 mouse_genomes_project 1 199189288 199189966 + Aim2 protein_coding processed_transcript MGP_NODShiLtJ_T0022410.1 MGP_NODShiLtJ_G0016455.1 mouse_genomes_project 1 175298821 175362046 + MGP_NODShiLtJ_P0022410 Edem3 protein_coding protein_coding MGP_NODShiLtJ_T0022411.1 MGP_NODShiLtJ_G0016455.1 mouse_genomes_project 1 175298824 175365162 + MGP_NODShiLtJ_P0022411 Edem3 protein_coding protein_coding MGP_NODShiLtJ_T0022412.1 MGP_NODShiLtJ_G0016455.1 mouse_genomes_project 1 175298910 175362090 + MGP_NODShiLtJ_P0022412 Edem3 protein_coding protein_coding MGP_NODShiLtJ_T0022413.1 MGP_NODShiLtJ_G0016455.1 mouse_genomes_project 1 175298910 175362090 + MGP_NODShiLtJ_P0022413 Edem3 protein_coding protein_coding MGP_NODShiLtJ_T0023794.1 MGP_NODShiLtJ_G0016764.1 mouse_genomes_project 1 209448522 209499592 - MGP_NODShiLtJ_P0023794 Capn2 protein_coding protein_coding MGP_NODShiLtJ_T0023795.1 MGP_NODShiLtJ_G0016764.1 mouse_genomes_project 1 209451477 209461091 - Capn2 protein_coding retained_intron MGP_NODShiLtJ_T0023796.1 MGP_NODShiLtJ_G0016764.1 mouse_genomes_project 1 209453799 209462778 - Capn2 protein_coding retained_intron MGP_NODShiLtJ_T0023797.1 MGP_NODShiLtJ_G0016764.1 mouse_genomes_project 1 209465149 209475451 - Capn2 protein_coding retained_intron MGP_NODShiLtJ_T0023798.1 MGP_NODShiLtJ_G0016764.1 mouse_genomes_project 1 209465154 209499676 - Capn2 protein_coding retained_intron MGP_NODShiLtJ_T0000637.1 MGP_NODShiLtJ_G0000571.1 mouse_genomes_project 1 157638351 157640503 + TEC TEC MGP_NODShiLtJ_T0000424.1 MGP_NODShiLtJ_G0000361.1 mouse_genomes_project 1 36703541 36704430 + TEC TEC MGP_NODShiLtJ_T0000425.1 MGP_NODShiLtJ_G0000361.1 mouse_genomes_project 1 36703560 36704430 + TEC TEC MGP_NODShiLtJ_T0021062.1 MGP_NODShiLtJ_G0016165.1 mouse_genomes_project 1 102147508 102228641 - MGP_NODShiLtJ_P0021062 Col6a3 protein_coding protein_coding MGP_NODShiLtJ_T0021063.1 MGP_NODShiLtJ_G0016165.1 mouse_genomes_project 1 102147508 102228641 - MGP_NODShiLtJ_P0021063 Col6a3 protein_coding protein_coding MGP_NODShiLtJ_T0021064.1 MGP_NODShiLtJ_G0016165.1 mouse_genomes_project 1 102148459 102228622 - MGP_NODShiLtJ_P0021064 Col6a3 protein_coding protein_coding MGP_NODShiLtJ_T0021065.1 MGP_NODShiLtJ_G0016165.1 mouse_genomes_project 1 102148988 102154815 - Col6a3 protein_coding retained_intron MGP_NODShiLtJ_T0021066.1 MGP_NODShiLtJ_G0016165.1 mouse_genomes_project 1 102173074 102189586 - Col6a3 protein_coding retained_intron MGP_NODShiLtJ_T0021067.1 MGP_NODShiLtJ_G0016165.1 mouse_genomes_project 1 102175493 102176323 - Col6a3 protein_coding retained_intron MGP_NODShiLtJ_T0021068.1 MGP_NODShiLtJ_G0016165.1 mouse_genomes_project 1 102184076 102228598 - MGP_NODShiLtJ_P0021068 Col6a3 protein_coding protein_coding MGP_NODShiLtJ_T0021069.1 MGP_NODShiLtJ_G0016165.1 mouse_genomes_project 1 102205363 102228641 - MGP_NODShiLtJ_P0021069 Col6a3 protein_coding protein_coding MGP_NODShiLtJ_T0005670.1 MGP_NODShiLtJ_G0004757.1 mouse_genomes_project 1 58722278 58785676 + Gm553 lincRNA lincRNA MGP_NODShiLtJ_T0098584.1 MGP_NODShiLtJ_G0036978.1 mouse_genomes_project 1 197274803 197274910 - Gm22950 snRNA snRNA MGP_NODShiLtJ_T0098144.1 MGP_NODShiLtJ_G0036556.1 mouse_genomes_project 1 50168114 50168317 + Gm23984 ribozyme ribozyme MGP_NODShiLtJ_T0020589.1 MGP_NODShiLtJ_G0016058.1 mouse_genomes_project 1 84955736 84959023 + MGP_NODShiLtJ_P0020589 Inha protein_coding protein_coding MGP_NODShiLtJ_T0012211.1 MGP_NODShiLtJ_G0010319.1 mouse_genomes_project 1 196324001 196324337 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011997.1 MGP_NODShiLtJ_G0010105.1 mouse_genomes_project 1 91745552 91749699 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011916.1 MGP_NODShiLtJ_G0010024.1 mouse_genomes_project 1 61218951 61219530 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000612.1 MGP_NODShiLtJ_G0000548.1 mouse_genomes_project 1 150345204 150346586 - TEC TEC MGP_NODShiLtJ_T0000350.1 MGP_NODShiLtJ_G0000288.1 mouse_genomes_project 1 961678 964029 + TEC TEC MGP_NODShiLtJ_T0019606.1 MGP_NODShiLtJ_G0015881.1 mouse_genomes_project 1 59476404 59595934 - MGP_NODShiLtJ_P0019606 Pms1 protein_coding protein_coding MGP_NODShiLtJ_T0019607.1 MGP_NODShiLtJ_G0015881.1 mouse_genomes_project 1 59484298 59595933 - MGP_NODShiLtJ_P0019607 Pms1 protein_coding protein_coding MGP_NODShiLtJ_T0019608.1 MGP_NODShiLtJ_G0015881.1 mouse_genomes_project 1 59550755 59595891 - MGP_NODShiLtJ_P0019608 Pms1 protein_coding protein_coding MGP_NODShiLtJ_T0019609.1 MGP_NODShiLtJ_G0015881.1 mouse_genomes_project 1 59573254 59581292 - MGP_NODShiLtJ_P0019609 Pms1 protein_coding protein_coding MGP_NODShiLtJ_T0019610.1 MGP_NODShiLtJ_G0015881.1 mouse_genomes_project 1 59573276 59595931 - MGP_NODShiLtJ_P0019610 Pms1 protein_coding protein_coding MGP_NODShiLtJ_T0019611.1 MGP_NODShiLtJ_G0015881.1 mouse_genomes_project 1 59580830 59595931 - MGP_NODShiLtJ_P0019611 Pms1 protein_coding protein_coding MGP_NODShiLtJ_T0019612.1 MGP_NODShiLtJ_G0015881.1 mouse_genomes_project 1 59594206 59595931 - Pms1 protein_coding retained_intron MGP_NODShiLtJ_T0009379.1 MGP_NODShiLtJ_G0007512.1 mouse_genomes_project 1 20553329 20553402 + Mir206 miRNA miRNA MGP_NODShiLtJ_T0005704.1 MGP_NODShiLtJ_G0004784.1 mouse_genomes_project 1 72392718 72395538 + Gm29152 lincRNA lincRNA MGP_NODShiLtJ_T0021951.1 MGP_NODShiLtJ_G0016360.1 mouse_genomes_project 1 152865079 152871646 - MGP_NODShiLtJ_P0021951 Snrpe protein_coding protein_coding MGP_NODShiLtJ_T0021952.1 MGP_NODShiLtJ_G0016360.1 mouse_genomes_project 1 152865325 152871476 - MGP_NODShiLtJ_P0021952 Snrpe protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021953.1 MGP_NODShiLtJ_G0016360.1 mouse_genomes_project 1 152867517 152871678 - MGP_NODShiLtJ_P0021953 Snrpe protein_coding protein_coding MGP_NODShiLtJ_T0021954.1 MGP_NODShiLtJ_G0016360.1 mouse_genomes_project 1 152867953 152871354 - MGP_NODShiLtJ_P0021954 Snrpe protein_coding protein_coding MGP_NODShiLtJ_T0021955.1 MGP_NODShiLtJ_G0016360.1 mouse_genomes_project 1 152870293 152871644 - MGP_NODShiLtJ_P0021955 Snrpe protein_coding protein_coding MGP_NODShiLtJ_T0099758.1 MGP_NODShiLtJ_G0038152.1 mouse_genomes_project 1 64361364 64361494 - Gm22371 snoRNA snoRNA MGP_NODShiLtJ_T0002748.1 MGP_NODShiLtJ_G0002607.1 mouse_genomes_project 1 44423138 44438257 + Gm37915 antisense antisense MGP_NODShiLtJ_T0098506.1 MGP_NODShiLtJ_G0036900.1 mouse_genomes_project 1 8245995 8246100 - Gm22607 snRNA snRNA MGP_NODShiLtJ_T0011870.1 MGP_NODShiLtJ_G0009978.1 mouse_genomes_project 1 47942024 47942840 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101504.1 MGP_NODShiLtJ_G0039674.1 mouse_genomes_project 1 195127910 195128114 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000409.1 MGP_NODShiLtJ_G0000346.1 mouse_genomes_project 1 26408402 26422354 - TEC TEC MGP_NODShiLtJ_T0005738.1 MGP_NODShiLtJ_G0004807.1 mouse_genomes_project 1 87152646 87154495 + Gm28386 lincRNA lincRNA MGP_NODShiLtJ_T0000399.1 MGP_NODShiLtJ_G0000336.1 mouse_genomes_project 1 25872076 25875451 - TEC TEC MGP_NODShiLtJ_T0005664.1 MGP_NODShiLtJ_G0004753.1 mouse_genomes_project 1 57284986 57287501 + Gm29325 lincRNA lincRNA MGP_NODShiLtJ_T0011971.1 MGP_NODShiLtJ_G0010079.1 mouse_genomes_project 1 76682376 76682823 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019804.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65526942 65598030 - MGP_NODShiLtJ_P0019804 Fam126b protein_coding protein_coding MGP_NODShiLtJ_T0019805.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65531157 65597973 - MGP_NODShiLtJ_P0019805 Fam126b protein_coding protein_coding MGP_NODShiLtJ_T0019806.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65531879 65574928 - MGP_NODShiLtJ_P0019806 Fam126b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019807.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65533219 65597898 - MGP_NODShiLtJ_P0019807 Fam126b protein_coding protein_coding MGP_NODShiLtJ_T0019808.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65559622 65597982 - MGP_NODShiLtJ_P0019808 Fam126b protein_coding protein_coding MGP_NODShiLtJ_T0019809.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65565288 65597971 - Fam126b protein_coding processed_transcript MGP_NODShiLtJ_T0019810.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65565315 65597984 - Fam126b protein_coding retained_intron MGP_NODShiLtJ_T0019811.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65571404 65574194 - Fam126b protein_coding retained_intron MGP_NODShiLtJ_T0019812.1 MGP_NODShiLtJ_G0015919.1 mouse_genomes_project 1 65574577 65598004 - Fam126b protein_coding retained_intron MGP_NODShiLtJ_T0012058.1 MGP_NODShiLtJ_G0010166.1 mouse_genomes_project 1 122783967 122784153 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000398.1 MGP_NODShiLtJ_G0000335.1 mouse_genomes_project 1 25858122 25859153 - TEC TEC MGP_NODShiLtJ_T0021231.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104531091 104622995 - MGP_NODShiLtJ_P0021231 Kif1a protein_coding protein_coding MGP_NODShiLtJ_T0021232.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104533378 104623004 - MGP_NODShiLtJ_P0021232 Kif1a protein_coding protein_coding MGP_NODShiLtJ_T0021233.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104533567 104623124 - MGP_NODShiLtJ_P0021233 Kif1a protein_coding protein_coding MGP_NODShiLtJ_T0021234.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104533907 104623020 - MGP_NODShiLtJ_P0021234 Kif1a protein_coding protein_coding MGP_NODShiLtJ_T0021235.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104534084 104602772 - MGP_NODShiLtJ_P0021235 Kif1a protein_coding protein_coding MGP_NODShiLtJ_T0021236.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104537948 104540336 - MGP_NODShiLtJ_P0021236 Kif1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021237.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104539120 104542833 - Kif1a protein_coding retained_intron MGP_NODShiLtJ_T0021238.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104554669 104623019 - Kif1a protein_coding processed_transcript MGP_NODShiLtJ_T0021239.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104558124 104570821 - MGP_NODShiLtJ_P0021239 Kif1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021240.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104586482 104589109 - Kif1a protein_coding processed_transcript MGP_NODShiLtJ_T0021241.1 MGP_NODShiLtJ_G0016202.1 mouse_genomes_project 1 104598074 104623007 - MGP_NODShiLtJ_P0021241 Kif1a protein_coding protein_coding MGP_NODShiLtJ_T0023142.1 MGP_NODShiLtJ_G0016604.1 mouse_genomes_project 1 196281556 196282378 + MGP_NODShiLtJ_P0023142 Gm26620 protein_coding protein_coding MGP_NODShiLtJ_T0020148.1 MGP_NODShiLtJ_G0015983.1 mouse_genomes_project 1 75020770 75045829 - MGP_NODShiLtJ_P0020148 Myl1 protein_coding protein_coding MGP_NODShiLtJ_T0020149.1 MGP_NODShiLtJ_G0015983.1 mouse_genomes_project 1 75020770 75032618 - MGP_NODShiLtJ_P0020149 Myl1 protein_coding protein_coding MGP_NODShiLtJ_T0020150.1 MGP_NODShiLtJ_G0015983.1 mouse_genomes_project 1 75020773 75032335 - MGP_NODShiLtJ_P0020150 Myl1 protein_coding protein_coding MGP_NODShiLtJ_T0020151.1 MGP_NODShiLtJ_G0015983.1 mouse_genomes_project 1 75021478 75032331 - Myl1 protein_coding processed_transcript MGP_NODShiLtJ_T0020152.1 MGP_NODShiLtJ_G0015983.1 mouse_genomes_project 1 75022520 75032314 - MGP_NODShiLtJ_P0020152 Myl1 protein_coding protein_coding MGP_NODShiLtJ_T0020153.1 MGP_NODShiLtJ_G0015983.1 mouse_genomes_project 1 75023116 75046070 - MGP_NODShiLtJ_P0020153 Myl1 protein_coding protein_coding MGP_NODShiLtJ_T0020154.1 MGP_NODShiLtJ_G0015983.1 mouse_genomes_project 1 75026402 75031671 - Myl1 protein_coding retained_intron MGP_NODShiLtJ_T0020155.1 MGP_NODShiLtJ_G0015983.1 mouse_genomes_project 1 75045148 75046090 - Myl1 protein_coding retained_intron MGP_NODShiLtJ_T0012041.1 MGP_NODShiLtJ_G0010149.1 mouse_genomes_project 1 114879796 114880514 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022174.1 MGP_NODShiLtJ_G0016408.1 mouse_genomes_project 1 155621549 155669572 + MGP_NODShiLtJ_P0022174 Kif21b protein_coding protein_coding MGP_NODShiLtJ_T0022175.1 MGP_NODShiLtJ_G0016408.1 mouse_genomes_project 1 155621579 155669582 + MGP_NODShiLtJ_P0022175 Kif21b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022176.1 MGP_NODShiLtJ_G0016408.1 mouse_genomes_project 1 155621614 155641618 + Kif21b protein_coding retained_intron MGP_NODShiLtJ_T0022177.1 MGP_NODShiLtJ_G0016408.1 mouse_genomes_project 1 155651935 155656622 + MGP_NODShiLtJ_P0022177 Kif21b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022178.1 MGP_NODShiLtJ_G0016408.1 mouse_genomes_project 1 155654526 155656408 + Kif21b protein_coding retained_intron MGP_NODShiLtJ_T0022179.1 MGP_NODShiLtJ_G0016408.1 mouse_genomes_project 1 155660887 155663873 + Kif21b protein_coding processed_transcript MGP_NODShiLtJ_T0002959.1 MGP_NODShiLtJ_G0002768.1 mouse_genomes_project 1 221037808 221038932 - Gm37650 antisense antisense MGP_NODShiLtJ_T0011841.1 MGP_NODShiLtJ_G0009949.1 mouse_genomes_project 1 37027359 37027693 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019173.1 MGP_NODShiLtJ_G0015799.1 mouse_genomes_project 1 40123257 40286630 - MGP_NODShiLtJ_P0019173 Tmem131 protein_coding protein_coding MGP_NODShiLtJ_T0019174.1 MGP_NODShiLtJ_G0015799.1 mouse_genomes_project 1 40123260 40286925 - MGP_NODShiLtJ_P0019174 Tmem131 protein_coding protein_coding MGP_NODShiLtJ_T0019175.1 MGP_NODShiLtJ_G0015799.1 mouse_genomes_project 1 40132069 40153449 - Tmem131 protein_coding retained_intron MGP_NODShiLtJ_T0019176.1 MGP_NODShiLtJ_G0015799.1 mouse_genomes_project 1 40144926 40146918 - Tmem131 protein_coding retained_intron MGP_NODShiLtJ_T0019177.1 MGP_NODShiLtJ_G0015799.1 mouse_genomes_project 1 40150516 40155628 - MGP_NODShiLtJ_P0019177 Tmem131 protein_coding protein_coding MGP_NODShiLtJ_T0019178.1 MGP_NODShiLtJ_G0015799.1 mouse_genomes_project 1 40152284 40156019 - MGP_NODShiLtJ_P0019178 Tmem131 protein_coding protein_coding MGP_NODShiLtJ_T0019179.1 MGP_NODShiLtJ_G0015799.1 mouse_genomes_project 1 40155526 40161495 - MGP_NODShiLtJ_P0019179 Tmem131 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019180.1 MGP_NODShiLtJ_G0015799.1 mouse_genomes_project 1 40183560 40290740 - MGP_NODShiLtJ_P0019180 Tmem131 protein_coding protein_coding MGP_NODShiLtJ_T0000539.1 MGP_NODShiLtJ_G0000475.1 mouse_genomes_project 1 97600032 97602816 + TEC TEC MGP_NODShiLtJ_T0002800.1 MGP_NODShiLtJ_G0002645.1 mouse_genomes_project 1 97724167 97874368 - Gm28375 antisense antisense MGP_NODShiLtJ_T0019966.1 MGP_NODShiLtJ_G0015945.1 mouse_genomes_project 1 68232650 68271959 + Ctla4 protein_coding processed_transcript MGP_NODShiLtJ_T0019967.1 MGP_NODShiLtJ_G0015945.1 mouse_genomes_project 1 68268270 68275058 + MGP_NODShiLtJ_P0019967 Ctla4 protein_coding protein_coding MGP_NODShiLtJ_T0019968.1 MGP_NODShiLtJ_G0015945.1 mouse_genomes_project 1 68268416 68273994 + MGP_NODShiLtJ_P0019968 Ctla4 protein_coding protein_coding MGP_NODShiLtJ_T0000622.1 MGP_NODShiLtJ_G0000557.1 mouse_genomes_project 1 153806850 153807832 - TEC TEC MGP_NODShiLtJ_T0023485.1 MGP_NODShiLtJ_G0016702.1 mouse_genomes_project 1 200531268 200539716 + MGP_NODShiLtJ_P0023485 Olfr220 protein_coding protein_coding MGP_NODShiLtJ_T0023486.1 MGP_NODShiLtJ_G0016702.1 mouse_genomes_project 1 200538738 200539716 + MGP_NODShiLtJ_P0023486 Olfr220 protein_coding protein_coding MGP_NODShiLtJ_T0000571.1 MGP_NODShiLtJ_G0000507.1 mouse_genomes_project 1 121193619 121195719 - TEC TEC MGP_NODShiLtJ_T0098556.1 MGP_NODShiLtJ_G0036950.1 mouse_genomes_project 1 140406065 140406214 + Gm24547 snRNA snRNA MGP_NODShiLtJ_T0099816.1 MGP_NODShiLtJ_G0038210.1 mouse_genomes_project 1 185590535 185590616 + Snord80 snoRNA snoRNA MGP_NODShiLtJ_T0023791.1 MGP_NODShiLtJ_G0016763.1 mouse_genomes_project 1 209388041 209443677 + MGP_NODShiLtJ_P0023791 Trp53bp2 protein_coding protein_coding MGP_NODShiLtJ_T0023792.1 MGP_NODShiLtJ_G0016763.1 mouse_genomes_project 1 209420912 209443027 + Trp53bp2 protein_coding retained_intron MGP_NODShiLtJ_T0023793.1 MGP_NODShiLtJ_G0016763.1 mouse_genomes_project 1 209424611 209428380 + MGP_NODShiLtJ_P0023793 Trp53bp2 protein_coding protein_coding MGP_NODShiLtJ_T0000625.1 MGP_NODShiLtJ_G0000560.1 mouse_genomes_project 1 154936415 154937429 - TEC TEC MGP_NODShiLtJ_T0011832.1 MGP_NODShiLtJ_G0009940.1 mouse_genomes_project 1 35990092 35992230 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018562.1 MGP_NODShiLtJ_G0015680.1 mouse_genomes_project 1 2223552 2317750 + MGP_NODShiLtJ_P0018562 Gm37988 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023419.1 MGP_NODShiLtJ_G0016664.1 mouse_genomes_project 1 198219295 198221513 - MGP_NODShiLtJ_P0023419 Dusp23 protein_coding protein_coding MGP_NODShiLtJ_T0099827.1 MGP_NODShiLtJ_G0038221.1 mouse_genomes_project 1 213922244 213922379 + Gm26169 snoRNA snoRNA MGP_NODShiLtJ_T0012035.1 MGP_NODShiLtJ_G0010143.1 mouse_genomes_project 1 112831070 112832916 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021145.1 MGP_NODShiLtJ_G0016180.1 mouse_genomes_project 1 102928693 102961974 + MGP_NODShiLtJ_P0021145 Traf3ip1 protein_coding protein_coding MGP_NODShiLtJ_T0021146.1 MGP_NODShiLtJ_G0016180.1 mouse_genomes_project 1 102928740 102963337 + MGP_NODShiLtJ_P0021146 Traf3ip1 protein_coding protein_coding MGP_NODShiLtJ_T0021147.1 MGP_NODShiLtJ_G0016180.1 mouse_genomes_project 1 102952367 102963337 + Traf3ip1 protein_coding retained_intron MGP_NODShiLtJ_T0000659.1 MGP_NODShiLtJ_G0000593.1 mouse_genomes_project 1 172639265 172641935 - TEC TEC MGP_NODShiLtJ_T0000664.1 MGP_NODShiLtJ_G0000598.1 mouse_genomes_project 1 175859782 175860128 - TEC TEC MGP_NODShiLtJ_T0098567.1 MGP_NODShiLtJ_G0036961.1 mouse_genomes_project 1 156830383 156830487 - Gm25609 snRNA snRNA MGP_NODShiLtJ_T0005672.1 MGP_NODShiLtJ_G0004759.1 mouse_genomes_project 1 62707280 62768823 + 9130227L01Rik lincRNA lincRNA MGP_NODShiLtJ_T0005673.1 MGP_NODShiLtJ_G0004759.1 mouse_genomes_project 1 62741682 62769053 + 9130227L01Rik lincRNA lincRNA MGP_NODShiLtJ_T0098557.1 MGP_NODShiLtJ_G0036951.1 mouse_genomes_project 1 142804815 142804919 + Gm25578 snRNA snRNA MGP_NODShiLtJ_T0000383.1 MGP_NODShiLtJ_G0000321.1 mouse_genomes_project 1 14412800 14414333 + TEC TEC MGP_NODShiLtJ_T0024024.1 MGP_NODShiLtJ_G0016813.1 mouse_genomes_project 1 218995152 219040550 - MGP_NODShiLtJ_P0024024 Ppp2r5a protein_coding protein_coding MGP_NODShiLtJ_T0024025.1 MGP_NODShiLtJ_G0016813.1 mouse_genomes_project 1 218998767 219000428 - Ppp2r5a protein_coding retained_intron MGP_NODShiLtJ_T0024026.1 MGP_NODShiLtJ_G0016813.1 mouse_genomes_project 1 219000296 219031490 - Ppp2r5a protein_coding processed_transcript MGP_NODShiLtJ_T0024027.1 MGP_NODShiLtJ_G0016813.1 mouse_genomes_project 1 219000922 219012677 - MGP_NODShiLtJ_P0024027 Ppp2r5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024028.1 MGP_NODShiLtJ_G0016813.1 mouse_genomes_project 1 219005682 219012666 - Ppp2r5a protein_coding retained_intron MGP_NODShiLtJ_T0024029.1 MGP_NODShiLtJ_G0016813.1 mouse_genomes_project 1 219017415 219047384 - Ppp2r5a protein_coding processed_transcript MGP_NODShiLtJ_T0024030.1 MGP_NODShiLtJ_G0016813.1 mouse_genomes_project 1 219045983 219051234 - Ppp2r5a protein_coding retained_intron MGP_NODShiLtJ_T0021350.1 MGP_NODShiLtJ_G0016228.1 mouse_genomes_project 1 109380941 109441325 - MGP_NODShiLtJ_P0021350 Slco4c1 protein_coding protein_coding MGP_NODShiLtJ_T0099800.1 MGP_NODShiLtJ_G0038194.1 mouse_genomes_project 1 157407925 157408041 + Gm22727 snoRNA snoRNA MGP_NODShiLtJ_T0000365.1 MGP_NODShiLtJ_G0000303.1 mouse_genomes_project 1 8650582 8652304 - TEC TEC MGP_NODShiLtJ_T0099822.1 MGP_NODShiLtJ_G0038216.1 mouse_genomes_project 1 190444338 190444423 + Gm24637 snoRNA snoRNA MGP_NODShiLtJ_T0020383.1 MGP_NODShiLtJ_G0016026.1 mouse_genomes_project 1 84185482 84211657 + MGP_NODShiLtJ_P0020383 Cyp27a1 protein_coding protein_coding MGP_NODShiLtJ_T0020384.1 MGP_NODShiLtJ_G0016026.1 mouse_genomes_project 1 84209115 84210481 + Cyp27a1 protein_coding retained_intron MGP_NODShiLtJ_T0020385.1 MGP_NODShiLtJ_G0016026.1 mouse_genomes_project 1 84210573 84211588 + Cyp27a1 protein_coding retained_intron MGP_NODShiLtJ_T0021188.1 MGP_NODShiLtJ_G0016192.1 mouse_genomes_project 1 104107893 104108949 + MGP_NODShiLtJ_P0021188 Olfr12 protein_coding protein_coding MGP_NODShiLtJ_T0005915.1 MGP_NODShiLtJ_G0004952.1 mouse_genomes_project 1 189924009 189925898 + 1700029M03Rik lincRNA lincRNA MGP_NODShiLtJ_T0005916.1 MGP_NODShiLtJ_G0004952.1 mouse_genomes_project 1 189924011 189924491 + 1700029M03Rik lincRNA lincRNA MGP_NODShiLtJ_T0023412.1 MGP_NODShiLtJ_G0016661.1 mouse_genomes_project 1 198134107 198144037 + MGP_NODShiLtJ_P0023412 Vsig8 protein_coding protein_coding MGP_NODShiLtJ_T0023413.1 MGP_NODShiLtJ_G0016661.1 mouse_genomes_project 1 198138943 198144036 + MGP_NODShiLtJ_P0023413 Vsig8 protein_coding protein_coding MGP_NODShiLtJ_T0020629.1 MGP_NODShiLtJ_G0016065.1 mouse_genomes_project 1 88210849 88229483 - MGP_NODShiLtJ_P0020629 BC035947 protein_coding protein_coding MGP_NODShiLtJ_T0020630.1 MGP_NODShiLtJ_G0016065.1 mouse_genomes_project 1 88210852 88217939 - BC035947 protein_coding processed_transcript MGP_NODShiLtJ_T0023026.1 MGP_NODShiLtJ_G0016570.1 mouse_genomes_project 1 191130106 191161495 - MGP_NODShiLtJ_P0023026 Dusp27 protein_coding protein_coding MGP_NODShiLtJ_T0023027.1 MGP_NODShiLtJ_G0016570.1 mouse_genomes_project 1 191130111 191161469 - MGP_NODShiLtJ_P0023027 Dusp27 protein_coding protein_coding MGP_NODShiLtJ_T0099814.1 MGP_NODShiLtJ_G0038208.1 mouse_genomes_project 1 185589918 185589984 + Snord78 snoRNA snoRNA MGP_NODShiLtJ_T0022659.1 MGP_NODShiLtJ_G0016501.1 mouse_genomes_project 1 181139457 181494050 - MGP_NODShiLtJ_P0022659 Rasal2 protein_coding protein_coding MGP_NODShiLtJ_T0022660.1 MGP_NODShiLtJ_G0016501.1 mouse_genomes_project 1 181144809 181493389 - MGP_NODShiLtJ_P0022660 Rasal2 protein_coding protein_coding MGP_NODShiLtJ_T0022661.1 MGP_NODShiLtJ_G0016501.1 mouse_genomes_project 1 181187903 181271790 - MGP_NODShiLtJ_P0022661 Rasal2 protein_coding protein_coding MGP_NODShiLtJ_T0022662.1 MGP_NODShiLtJ_G0016501.1 mouse_genomes_project 1 181188096 181285532 - MGP_NODShiLtJ_P0022662 Rasal2 protein_coding protein_coding MGP_NODShiLtJ_T0022663.1 MGP_NODShiLtJ_G0016501.1 mouse_genomes_project 1 181191031 181193374 - Rasal2 protein_coding processed_transcript MGP_NODShiLtJ_T0022664.1 MGP_NODShiLtJ_G0016501.1 mouse_genomes_project 1 181191031 181256772 - MGP_NODShiLtJ_P0022664 Rasal2 protein_coding protein_coding MGP_NODShiLtJ_T0022665.1 MGP_NODShiLtJ_G0016501.1 mouse_genomes_project 1 181316559 181494050 - Rasal2 protein_coding retained_intron MGP_NODShiLtJ_T0020186.1 MGP_NODShiLtJ_G0015989.1 mouse_genomes_project 1 79838476 80017168 + MGP_NODShiLtJ_P0020186 Vwc2l protein_coding protein_coding MGP_NODShiLtJ_T0020187.1 MGP_NODShiLtJ_G0015989.1 mouse_genomes_project 1 79838513 79846108 + Vwc2l protein_coding retained_intron MGP_NODShiLtJ_T0020188.1 MGP_NODShiLtJ_G0015989.1 mouse_genomes_project 1 79838663 80017153 + MGP_NODShiLtJ_P0020188 Vwc2l protein_coding protein_coding MGP_NODShiLtJ_T0020189.1 MGP_NODShiLtJ_G0015989.1 mouse_genomes_project 1 79838684 80014260 + MGP_NODShiLtJ_P0020189 Vwc2l protein_coding protein_coding MGP_NODShiLtJ_T0020391.1 MGP_NODShiLtJ_G0016028.1 mouse_genomes_project 1 84249897 84264488 + MGP_NODShiLtJ_P0020391 Wnt6 protein_coding protein_coding MGP_NODShiLtJ_T0020392.1 MGP_NODShiLtJ_G0016028.1 mouse_genomes_project 1 84261604 84263768 + Wnt6 protein_coding retained_intron MGP_NODShiLtJ_T0022180.1 MGP_NODShiLtJ_G0016409.1 mouse_genomes_project 1 155673047 155708184 - MGP_NODShiLtJ_P0022180 Mroh3 protein_coding protein_coding MGP_NODShiLtJ_T0022181.1 MGP_NODShiLtJ_G0016409.1 mouse_genomes_project 1 155673225 155682552 - MGP_NODShiLtJ_P0022181 Mroh3 protein_coding protein_coding MGP_NODShiLtJ_T0022182.1 MGP_NODShiLtJ_G0016409.1 mouse_genomes_project 1 155673225 155713929 - MGP_NODShiLtJ_P0022182 Mroh3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022183.1 MGP_NODShiLtJ_G0016409.1 mouse_genomes_project 1 155673235 155674781 - Mroh3 protein_coding retained_intron MGP_NODShiLtJ_T0022184.1 MGP_NODShiLtJ_G0016409.1 mouse_genomes_project 1 155682624 155694194 - MGP_NODShiLtJ_P0022184 Mroh3 protein_coding protein_coding MGP_NODShiLtJ_T0012066.1 MGP_NODShiLtJ_G0010174.1 mouse_genomes_project 1 126229948 126230876 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005810.1 MGP_NODShiLtJ_G0004869.1 mouse_genomes_project 1 135826672 135833987 + Gm28867 lincRNA lincRNA MGP_NODShiLtJ_T0022168.1 MGP_NODShiLtJ_G0016407.1 mouse_genomes_project 1 155539900 155609717 + MGP_NODShiLtJ_P0022168 Cacna1s protein_coding protein_coding MGP_NODShiLtJ_T0022169.1 MGP_NODShiLtJ_G0016407.1 mouse_genomes_project 1 155539934 155609722 + MGP_NODShiLtJ_P0022169 Cacna1s protein_coding protein_coding MGP_NODShiLtJ_T0022170.1 MGP_NODShiLtJ_G0016407.1 mouse_genomes_project 1 155540051 155610009 + MGP_NODShiLtJ_P0022170 Cacna1s protein_coding protein_coding MGP_NODShiLtJ_T0022171.1 MGP_NODShiLtJ_G0016407.1 mouse_genomes_project 1 155560717 155609716 + MGP_NODShiLtJ_P0022171 Cacna1s protein_coding protein_coding MGP_NODShiLtJ_T0022172.1 MGP_NODShiLtJ_G0016407.1 mouse_genomes_project 1 155595542 155602191 + Cacna1s protein_coding retained_intron MGP_NODShiLtJ_T0022173.1 MGP_NODShiLtJ_G0016407.1 mouse_genomes_project 1 155607442 155609716 + Cacna1s protein_coding processed_transcript MGP_NODShiLtJ_T0019715.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64325247 64345137 - MGP_NODShiLtJ_P0019715 Tyw5 protein_coding protein_coding MGP_NODShiLtJ_T0019716.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64325250 64344507 - Tyw5 protein_coding retained_intron MGP_NODShiLtJ_T0019717.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64325250 64344710 - MGP_NODShiLtJ_P0019717 Tyw5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019718.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64325415 64328756 - Tyw5 protein_coding processed_transcript MGP_NODShiLtJ_T0019719.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64325426 64331679 - Tyw5 protein_coding retained_intron MGP_NODShiLtJ_T0019720.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64325676 64344479 - MGP_NODShiLtJ_P0019720 Tyw5 protein_coding protein_coding MGP_NODShiLtJ_T0019721.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64325696 64329723 - Tyw5 protein_coding retained_intron MGP_NODShiLtJ_T0019722.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64328696 64339560 - Tyw5 protein_coding processed_transcript MGP_NODShiLtJ_T0019723.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64329411 64344507 - MGP_NODShiLtJ_P0019723 Tyw5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019724.1 MGP_NODShiLtJ_G0015905.1 mouse_genomes_project 1 64331165 64344573 - Tyw5 protein_coding retained_intron MGP_NODShiLtJ_T0020284.1 MGP_NODShiLtJ_G0016012.1 mouse_genomes_project 1 83724926 83727450 + MGP_NODShiLtJ_P0020284 Pnkd protein_coding protein_coding MGP_NODShiLtJ_T0020285.1 MGP_NODShiLtJ_G0016012.1 mouse_genomes_project 1 83725041 83807009 + MGP_NODShiLtJ_P0020285 Pnkd protein_coding protein_coding MGP_NODShiLtJ_T0020286.1 MGP_NODShiLtJ_G0016012.1 mouse_genomes_project 1 83725046 83726630 + Pnkd protein_coding retained_intron MGP_NODShiLtJ_T0020287.1 MGP_NODShiLtJ_G0016012.1 mouse_genomes_project 1 83725050 83800952 + Pnkd protein_coding retained_intron MGP_NODShiLtJ_T0020288.1 MGP_NODShiLtJ_G0016012.1 mouse_genomes_project 1 83725051 83807019 + MGP_NODShiLtJ_P0020288 Pnkd protein_coding protein_coding MGP_NODShiLtJ_T0020289.1 MGP_NODShiLtJ_G0016012.1 mouse_genomes_project 1 83725773 83727269 + Pnkd protein_coding retained_intron MGP_NODShiLtJ_T0020298.1 MGP_NODShiLtJ_G0016012.1 mouse_genomes_project 1 83781606 83807011 + MGP_NODShiLtJ_P0020298 Pnkd protein_coding protein_coding MGP_NODShiLtJ_T0020299.1 MGP_NODShiLtJ_G0016012.1 mouse_genomes_project 1 83781659 83785242 + Pnkd protein_coding retained_intron MGP_NODShiLtJ_T0019227.1 MGP_NODShiLtJ_G0015807.1 mouse_genomes_project 1 41193862 41307316 - MGP_NODShiLtJ_P0019227 Tsga10 protein_coding protein_coding MGP_NODShiLtJ_T0019228.1 MGP_NODShiLtJ_G0015807.1 mouse_genomes_project 1 41201009 41308688 - MGP_NODShiLtJ_P0019228 Tsga10 protein_coding protein_coding MGP_NODShiLtJ_T0019229.1 MGP_NODShiLtJ_G0015807.1 mouse_genomes_project 1 41201009 41297611 - MGP_NODShiLtJ_P0019229 Tsga10 protein_coding protein_coding MGP_NODShiLtJ_T0019230.1 MGP_NODShiLtJ_G0015807.1 mouse_genomes_project 1 41237399 41297584 - MGP_NODShiLtJ_P0019230 Tsga10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019231.1 MGP_NODShiLtJ_G0015807.1 mouse_genomes_project 1 41271733 41307073 - MGP_NODShiLtJ_P0019231 Tsga10 protein_coding protein_coding MGP_NODShiLtJ_T0019232.1 MGP_NODShiLtJ_G0015807.1 mouse_genomes_project 1 41272765 41307310 - MGP_NODShiLtJ_P0019232 Tsga10 protein_coding protein_coding MGP_NODShiLtJ_T0019233.1 MGP_NODShiLtJ_G0015807.1 mouse_genomes_project 1 41273601 41307310 - MGP_NODShiLtJ_P0019233 Tsga10 protein_coding protein_coding MGP_NODShiLtJ_T0019234.1 MGP_NODShiLtJ_G0015807.1 mouse_genomes_project 1 41281555 41285658 - Tsga10 protein_coding retained_intron MGP_NODShiLtJ_T0018863.1 MGP_NODShiLtJ_G0015735.1 mouse_genomes_project 1 19879860 19962145 - MGP_NODShiLtJ_P0018863 Pkhd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018864.1 MGP_NODShiLtJ_G0015735.1 mouse_genomes_project 1 19879864 20484159 - MGP_NODShiLtJ_P0018864 Pkhd1 protein_coding protein_coding MGP_NODShiLtJ_T0018865.1 MGP_NODShiLtJ_G0015735.1 mouse_genomes_project 1 20229338 20272490 - Pkhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0018866.1 MGP_NODShiLtJ_G0015735.1 mouse_genomes_project 1 20452713 20484159 - Pkhd1 protein_coding retained_intron MGP_NODShiLtJ_T0018867.1 MGP_NODShiLtJ_G0015735.1 mouse_genomes_project 1 20471215 20484135 - Pkhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0019677.1 MGP_NODShiLtJ_G0015895.1 mouse_genomes_project 1 61777012 61788531 - MGP_NODShiLtJ_P0019677 Hspd1 protein_coding protein_coding MGP_NODShiLtJ_T0019678.1 MGP_NODShiLtJ_G0015895.1 mouse_genomes_project 1 61783572 61788750 - MGP_NODShiLtJ_P0019678 Hspd1 protein_coding protein_coding MGP_NODShiLtJ_T0019679.1 MGP_NODShiLtJ_G0015895.1 mouse_genomes_project 1 61785038 61788750 - MGP_NODShiLtJ_P0019679 Hspd1 protein_coding protein_coding MGP_NODShiLtJ_T0002935.1 MGP_NODShiLtJ_G0002752.1 mouse_genomes_project 1 215349378 215351794 - 9330162B11Rik antisense antisense MGP_NODShiLtJ_T0012249.1 MGP_NODShiLtJ_G0010357.1 mouse_genomes_project 1 219055359 219055941 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023452.1 MGP_NODShiLtJ_G0016680.1 mouse_genomes_project 1 199286094 199323478 - MGP_NODShiLtJ_P0023452 protein_coding protein_coding MGP_NODShiLtJ_T0023453.1 MGP_NODShiLtJ_G0016680.1 mouse_genomes_project 1 199287142 199323478 - MGP_NODShiLtJ_P0023453 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023454.1 MGP_NODShiLtJ_G0016680.1 mouse_genomes_project 1 199287142 199323322 - MGP_NODShiLtJ_P0023454 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024019.1 MGP_NODShiLtJ_G0016810.1 mouse_genomes_project 1 218800051 218813113 - MGP_NODShiLtJ_P0024019 Atf3 protein_coding protein_coding MGP_NODShiLtJ_T0024020.1 MGP_NODShiLtJ_G0016810.1 mouse_genomes_project 1 218800051 218849132 - MGP_NODShiLtJ_P0024020 Atf3 protein_coding protein_coding MGP_NODShiLtJ_T0024021.1 MGP_NODShiLtJ_G0016810.1 mouse_genomes_project 1 218801180 218812881 - Atf3 protein_coding processed_transcript MGP_NODShiLtJ_T0002832.1 MGP_NODShiLtJ_G0002670.1 mouse_genomes_project 1 149690657 149691823 - Gm28857 antisense antisense MGP_NODShiLtJ_T0005981.1 MGP_NODShiLtJ_G0005003.1 mouse_genomes_project 1 214195475 214199319 + 1700023G09Rik lincRNA lincRNA MGP_NODShiLtJ_T0005982.1 MGP_NODShiLtJ_G0005003.1 mouse_genomes_project 1 214195504 214198533 + 1700023G09Rik lincRNA lincRNA MGP_NODShiLtJ_T0009430.1 MGP_NODShiLtJ_G0007563.1 mouse_genomes_project 1 104883929 104884057 + Mir6345 miRNA miRNA MGP_NODShiLtJ_T0099794.1 MGP_NODShiLtJ_G0038188.1 mouse_genomes_project 1 145938607 145938716 + Gm23734 snoRNA snoRNA MGP_NODShiLtJ_T0020372.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84132039 84176021 + MGP_NODShiLtJ_P0020372 Ttll4 protein_coding protein_coding MGP_NODShiLtJ_T0020373.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84132044 84157291 + MGP_NODShiLtJ_P0020373 Ttll4 protein_coding protein_coding MGP_NODShiLtJ_T0020374.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84132111 84143572 + Ttll4 protein_coding retained_intron MGP_NODShiLtJ_T0020375.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84132111 84153967 + MGP_NODShiLtJ_P0020375 Ttll4 protein_coding protein_coding MGP_NODShiLtJ_T0020376.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84151073 84170265 + MGP_NODShiLtJ_P0020376 Ttll4 protein_coding protein_coding MGP_NODShiLtJ_T0020377.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84157259 84160562 + Ttll4 protein_coding processed_transcript MGP_NODShiLtJ_T0020378.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84157889 84160584 + Ttll4 protein_coding processed_transcript MGP_NODShiLtJ_T0020379.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84161356 84162612 + Ttll4 protein_coding retained_intron MGP_NODShiLtJ_T0020380.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84162006 84174120 + Ttll4 protein_coding processed_transcript MGP_NODShiLtJ_T0020381.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84167500 84172166 + Ttll4 protein_coding retained_intron MGP_NODShiLtJ_T0020382.1 MGP_NODShiLtJ_G0016025.1 mouse_genomes_project 1 84168021 84170129 + Ttll4 protein_coding processed_transcript MGP_NODShiLtJ_T0002707.1 MGP_NODShiLtJ_G0002576.1 mouse_genomes_project 1 12221207 12232570 + Gm29570 antisense antisense MGP_NODShiLtJ_T0099809.1 MGP_NODShiLtJ_G0038203.1 mouse_genomes_project 1 185395543 185395664 - Gm24988 snoRNA snoRNA MGP_NODShiLtJ_T0023045.1 MGP_NODShiLtJ_G0016575.1 mouse_genomes_project 1 191419704 191445420 - MGP_NODShiLtJ_P0023045 Pogk protein_coding protein_coding MGP_NODShiLtJ_T0023046.1 MGP_NODShiLtJ_G0016575.1 mouse_genomes_project 1 191427323 191445029 - MGP_NODShiLtJ_P0023046 Pogk protein_coding protein_coding MGP_NODShiLtJ_T0023047.1 MGP_NODShiLtJ_G0016575.1 mouse_genomes_project 1 191428709 191445466 - MGP_NODShiLtJ_P0023047 Pogk protein_coding protein_coding MGP_NODShiLtJ_T0023048.1 MGP_NODShiLtJ_G0016575.1 mouse_genomes_project 1 191430492 191445425 - MGP_NODShiLtJ_P0023048 Pogk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023049.1 MGP_NODShiLtJ_G0016575.1 mouse_genomes_project 1 191431263 191445501 - MGP_NODShiLtJ_P0023049 Pogk protein_coding protein_coding MGP_NODShiLtJ_T0023050.1 MGP_NODShiLtJ_G0016575.1 mouse_genomes_project 1 191438987 191444927 - MGP_NODShiLtJ_P0023050 Pogk protein_coding protein_coding MGP_NODShiLtJ_T0020199.1 MGP_NODShiLtJ_G0015992.1 mouse_genomes_project 1 80756694 80779177 + MGP_NODShiLtJ_P0020199 Atic protein_coding protein_coding MGP_NODShiLtJ_T0020200.1 MGP_NODShiLtJ_G0015992.1 mouse_genomes_project 1 80756723 80762743 + Atic protein_coding retained_intron MGP_NODShiLtJ_T0020201.1 MGP_NODShiLtJ_G0015992.1 mouse_genomes_project 1 80756723 80759496 + Atic protein_coding retained_intron MGP_NODShiLtJ_T0020202.1 MGP_NODShiLtJ_G0015992.1 mouse_genomes_project 1 80756723 80772911 + Atic protein_coding retained_intron MGP_NODShiLtJ_T0020203.1 MGP_NODShiLtJ_G0015992.1 mouse_genomes_project 1 80756757 80762743 + Atic protein_coding retained_intron MGP_NODShiLtJ_T0020204.1 MGP_NODShiLtJ_G0015992.1 mouse_genomes_project 1 80768413 80772508 + Atic protein_coding retained_intron MGP_NODShiLtJ_T0002837.1 MGP_NODShiLtJ_G0002673.1 mouse_genomes_project 1 150263105 150267510 + Gm28913 antisense antisense MGP_NODShiLtJ_T0012103.1 MGP_NODShiLtJ_G0010211.1 mouse_genomes_project 1 141242290 141242407 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002833.1 MGP_NODShiLtJ_G0002671.1 mouse_genomes_project 1 149770633 149788196 - Gm15848 antisense antisense MGP_NODShiLtJ_T0002834.1 MGP_NODShiLtJ_G0002671.1 mouse_genomes_project 1 149770859 149784786 - Gm15848 antisense antisense MGP_NODShiLtJ_T0002835.1 MGP_NODShiLtJ_G0002671.1 mouse_genomes_project 1 149781513 149784816 - Gm15848 antisense antisense MGP_NODShiLtJ_T0099756.1 MGP_NODShiLtJ_G0038150.1 mouse_genomes_project 1 58066230 58066352 - Gm27607 snoRNA snoRNA MGP_NODShiLtJ_T0022029.1 MGP_NODShiLtJ_G0016379.1 mouse_genomes_project 1 153754270 153775409 + MGP_NODShiLtJ_P0022029 Adipor1 protein_coding protein_coding MGP_NODShiLtJ_T0022030.1 MGP_NODShiLtJ_G0016379.1 mouse_genomes_project 1 153754348 153775406 + MGP_NODShiLtJ_P0022030 Adipor1 protein_coding protein_coding MGP_NODShiLtJ_T0022031.1 MGP_NODShiLtJ_G0016379.1 mouse_genomes_project 1 153754363 153754833 + Adipor1 protein_coding processed_transcript MGP_NODShiLtJ_T0022032.1 MGP_NODShiLtJ_G0016379.1 mouse_genomes_project 1 153754456 153765821 + Adipor1 protein_coding retained_intron MGP_NODShiLtJ_T0023434.1 MGP_NODShiLtJ_G0016674.1 mouse_genomes_project 1 199061684 199096354 - MGP_NODShiLtJ_P0023434 Cadm3 protein_coding protein_coding MGP_NODShiLtJ_T0023435.1 MGP_NODShiLtJ_G0016674.1 mouse_genomes_project 1 199064438 199096344 - MGP_NODShiLtJ_P0023435 Cadm3 protein_coding protein_coding MGP_NODShiLtJ_T0023436.1 MGP_NODShiLtJ_G0016674.1 mouse_genomes_project 1 199065290 199070385 - Cadm3 protein_coding retained_intron MGP_NODShiLtJ_T0023437.1 MGP_NODShiLtJ_G0016674.1 mouse_genomes_project 1 199070880 199096307 - Cadm3 protein_coding retained_intron MGP_NODShiLtJ_T0023438.1 MGP_NODShiLtJ_G0016674.1 mouse_genomes_project 1 199073276 199096292 - Cadm3 protein_coding retained_intron MGP_NODShiLtJ_T0011148.1 MGP_NODShiLtJ_G0009281.1 mouse_genomes_project 1 198276358 198276685 - Gm22383 misc_RNA misc_RNA MGP_NODShiLtJ_T0000747.1 MGP_NODShiLtJ_G0000680.1 mouse_genomes_project 1 207286785 207290518 - TEC TEC MGP_NODShiLtJ_T0021862.1 MGP_NODShiLtJ_G0016340.1 mouse_genomes_project 1 151351047 151351767 - MGP_NODShiLtJ_P0021862 Gm10188 protein_coding protein_coding MGP_NODShiLtJ_T0000515.1 MGP_NODShiLtJ_G0000451.1 mouse_genomes_project 1 89628388 89630179 + TEC TEC MGP_NODShiLtJ_T0018937.1 MGP_NODShiLtJ_G0015755.1 mouse_genomes_project 1 24569224 24650999 + MGP_NODShiLtJ_P0018937 Col9a1 protein_coding protein_coding MGP_NODShiLtJ_T0018938.1 MGP_NODShiLtJ_G0015755.1 mouse_genomes_project 1 24590241 24650999 + MGP_NODShiLtJ_P0018938 Col9a1 protein_coding protein_coding MGP_NODShiLtJ_T0018939.1 MGP_NODShiLtJ_G0015755.1 mouse_genomes_project 1 24592071 24618165 + Col9a1 protein_coding processed_transcript MGP_NODShiLtJ_T0018940.1 MGP_NODShiLtJ_G0015755.1 mouse_genomes_project 1 24626898 24628337 + Col9a1 protein_coding processed_transcript MGP_NODShiLtJ_T0021245.1 MGP_NODShiLtJ_G0016204.1 mouse_genomes_project 1 104672932 104682533 - MGP_NODShiLtJ_P0021245 2310007B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0021246.1 MGP_NODShiLtJ_G0016204.1 mouse_genomes_project 1 104673166 104682455 - MGP_NODShiLtJ_P0021246 2310007B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0000782.1 MGP_NODShiLtJ_G0000713.1 mouse_genomes_project 1 221252751 221254897 + TEC TEC MGP_NODShiLtJ_T0012210.1 MGP_NODShiLtJ_G0010318.1 mouse_genomes_project 1 194864461 194865070 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020040.1 MGP_NODShiLtJ_G0015960.1 mouse_genomes_project 1 71734710 71833746 - MGP_NODShiLtJ_P0020040 Klf7 protein_coding protein_coding MGP_NODShiLtJ_T0020041.1 MGP_NODShiLtJ_G0015960.1 mouse_genomes_project 1 71750193 71833737 - MGP_NODShiLtJ_P0020041 Klf7 protein_coding protein_coding MGP_NODShiLtJ_T0020042.1 MGP_NODShiLtJ_G0015960.1 mouse_genomes_project 1 71790511 71834534 - MGP_NODShiLtJ_P0020042 Klf7 protein_coding protein_coding MGP_NODShiLtJ_T0012028.1 MGP_NODShiLtJ_G0010136.1 mouse_genomes_project 1 105822587 105823429 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023803.1 MGP_NODShiLtJ_G0016766.1 mouse_genomes_project 1 209749975 209752030 - MGP_NODShiLtJ_P0023803 Ccdc185 protein_coding protein_coding MGP_NODShiLtJ_T0011732.1 MGP_NODShiLtJ_G0009840.1 mouse_genomes_project 1 1559940 1561613 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005877.1 MGP_NODShiLtJ_G0004923.1 mouse_genomes_project 1 175079458 175081158 - Gm28181 lincRNA lincRNA MGP_NODShiLtJ_T0020321.1 MGP_NODShiLtJ_G0016018.1 mouse_genomes_project 1 83898168 83970564 - MGP_NODShiLtJ_P0020321 Usp37 protein_coding protein_coding MGP_NODShiLtJ_T0020322.1 MGP_NODShiLtJ_G0016018.1 mouse_genomes_project 1 83900387 84011238 - MGP_NODShiLtJ_P0020322 Usp37 protein_coding protein_coding MGP_NODShiLtJ_T0020323.1 MGP_NODShiLtJ_G0016018.1 mouse_genomes_project 1 83901768 83931821 - Usp37 protein_coding processed_transcript MGP_NODShiLtJ_T0020324.1 MGP_NODShiLtJ_G0016018.1 mouse_genomes_project 1 83912084 83970546 - Usp37 protein_coding retained_intron MGP_NODShiLtJ_T0020325.1 MGP_NODShiLtJ_G0016018.1 mouse_genomes_project 1 83959648 83970567 - MGP_NODShiLtJ_P0020325 Usp37 protein_coding protein_coding MGP_NODShiLtJ_T0020326.1 MGP_NODShiLtJ_G0016018.1 mouse_genomes_project 1 83964623 83970552 - Usp37 protein_coding retained_intron MGP_NODShiLtJ_T0020327.1 MGP_NODShiLtJ_G0016018.1 mouse_genomes_project 1 83964707 83971044 - Usp37 protein_coding processed_transcript MGP_NODShiLtJ_T0101026.1 MGP_NODShiLtJ_G0039405.1 mouse_genomes_project 1 210202258 210202926 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0002944.1 MGP_NODShiLtJ_G0002759.1 mouse_genomes_project 1 218702640 218703498 - Gm38188 antisense antisense MGP_NODShiLtJ_T0011820.1 MGP_NODShiLtJ_G0009928.1 mouse_genomes_project 1 30247809 30248083 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021143.1 MGP_NODShiLtJ_G0016179.1 mouse_genomes_project 1 102849926 102893976 - MGP_NODShiLtJ_P0021143 Per2 protein_coding protein_coding MGP_NODShiLtJ_T0021144.1 MGP_NODShiLtJ_G0016179.1 mouse_genomes_project 1 102882413 102884547 - Per2 protein_coding processed_transcript MGP_NODShiLtJ_T0019081.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39411143 39520428 - MGP_NODShiLtJ_P0019081 Uggt1 protein_coding protein_coding MGP_NODShiLtJ_T0019082.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39414596 39436926 - Uggt1 protein_coding retained_intron MGP_NODShiLtJ_T0019083.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39414600 39520284 - MGP_NODShiLtJ_P0019083 Uggt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019084.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39417271 39421639 - Uggt1 protein_coding retained_intron MGP_NODShiLtJ_T0019085.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39432861 39445885 - MGP_NODShiLtJ_P0019085 Uggt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019086.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39433340 39456173 - MGP_NODShiLtJ_P0019086 Uggt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019087.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39434493 39436074 - Uggt1 protein_coding retained_intron MGP_NODShiLtJ_T0019088.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39452189 39520230 - Uggt1 protein_coding retained_intron MGP_NODShiLtJ_T0019089.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39459425 39483592 - MGP_NODShiLtJ_P0019089 Uggt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019090.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39469513 39481766 - Uggt1 protein_coding retained_intron MGP_NODShiLtJ_T0019091.1 MGP_NODShiLtJ_G0015784.1 mouse_genomes_project 1 39519761 39520843 - Uggt1 protein_coding retained_intron MGP_NODShiLtJ_T0005606.1 MGP_NODShiLtJ_G0004714.1 mouse_genomes_project 1 25475093 25476861 - Gm28237 lincRNA lincRNA MGP_NODShiLtJ_T0005607.1 MGP_NODShiLtJ_G0004714.1 mouse_genomes_project 1 25475880 25477043 - Gm28237 lincRNA lincRNA MGP_NODShiLtJ_T0000540.1 MGP_NODShiLtJ_G0000476.1 mouse_genomes_project 1 97640629 97642939 + TEC TEC MGP_NODShiLtJ_T0098222.1 MGP_NODShiLtJ_G0036634.1 mouse_genomes_project 1 58003228 58005727 - Gm28323 sense_intronic sense_intronic MGP_NODShiLtJ_T0000491.1 MGP_NODShiLtJ_G0000427.1 mouse_genomes_project 1 74858069 74864123 + TEC TEC MGP_NODShiLtJ_T0098585.1 MGP_NODShiLtJ_G0036979.1 mouse_genomes_project 1 198443531 198443628 - Gm24817 snRNA snRNA MGP_NODShiLtJ_T0021616.1 MGP_NODShiLtJ_G0016287.1 mouse_genomes_project 1 143969340 143980046 + MGP_NODShiLtJ_P0021616 Slc35f5 protein_coding protein_coding MGP_NODShiLtJ_T0021617.1 MGP_NODShiLtJ_G0016287.1 mouse_genomes_project 1 143969761 144007401 + MGP_NODShiLtJ_P0021617 Slc35f5 protein_coding protein_coding MGP_NODShiLtJ_T0021618.1 MGP_NODShiLtJ_G0016287.1 mouse_genomes_project 1 143996093 144006729 + MGP_NODShiLtJ_P0021618 Slc35f5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011818.1 MGP_NODShiLtJ_G0009926.1 mouse_genomes_project 1 29275194 29275848 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002899.1 MGP_NODShiLtJ_G0002722.1 mouse_genomes_project 1 195260924 195263920 + 3110045C21Rik antisense antisense MGP_NODShiLtJ_T0002900.1 MGP_NODShiLtJ_G0002722.1 mouse_genomes_project 1 195260967 195263894 + 3110045C21Rik antisense antisense MGP_NODShiLtJ_T0002774.1 MGP_NODShiLtJ_G0002627.1 mouse_genomes_project 1 70256358 70259741 - Gm29083 antisense antisense MGP_NODShiLtJ_T0012075.1 MGP_NODShiLtJ_G0010183.1 mouse_genomes_project 1 129519912 129522056 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012039.1 MGP_NODShiLtJ_G0010147.1 mouse_genomes_project 1 114085626 114085981 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023572.1 MGP_NODShiLtJ_G0016718.1 mouse_genomes_project 1 204109675 204137799 + MGP_NODShiLtJ_P0023572 1700016C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0019433.1 MGP_NODShiLtJ_G0015851.1 mouse_genomes_project 1 48109632 48115617 - MGP_NODShiLtJ_P0019433 Gm8251 protein_coding protein_coding MGP_NODShiLtJ_T0021626.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144354344 144990198 - MGP_NODShiLtJ_P0021626 Nckap5 protein_coding protein_coding MGP_NODShiLtJ_T0021627.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144354361 145352909 - MGP_NODShiLtJ_P0021627 Nckap5 protein_coding protein_coding MGP_NODShiLtJ_T0021628.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144354361 145352909 - MGP_NODShiLtJ_P0021628 Nckap5 protein_coding protein_coding MGP_NODShiLtJ_T0021629.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144354372 144990013 - MGP_NODShiLtJ_P0021629 Nckap5 protein_coding protein_coding MGP_NODShiLtJ_T0021630.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144355044 144407740 - Nckap5 protein_coding processed_transcript MGP_NODShiLtJ_T0021631.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144355467 144944932 - MGP_NODShiLtJ_P0021631 Nckap5 protein_coding protein_coding MGP_NODShiLtJ_T0021632.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144355684 144467207 - MGP_NODShiLtJ_P0021632 Nckap5 protein_coding protein_coding MGP_NODShiLtJ_T0021633.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144471978 144485814 - Nckap5 protein_coding processed_transcript MGP_NODShiLtJ_T0021634.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144694434 145353076 - MGP_NODShiLtJ_P0021634 Nckap5 protein_coding protein_coding MGP_NODShiLtJ_T0021635.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 144730752 145244707 - MGP_NODShiLtJ_P0021635 Nckap5 protein_coding protein_coding MGP_NODShiLtJ_T0021636.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 145023966 145244695 - Nckap5 protein_coding retained_intron MGP_NODShiLtJ_T0021637.1 MGP_NODShiLtJ_G0016290.1 mouse_genomes_project 1 145027152 145352758 - Nckap5 protein_coding retained_intron MGP_NODShiLtJ_T0099769.1 MGP_NODShiLtJ_G0038163.1 mouse_genomes_project 1 74324098 74324235 + Gm24729 snoRNA snoRNA MGP_NODShiLtJ_T0011811.1 MGP_NODShiLtJ_G0009919.1 mouse_genomes_project 1 25418773 25419971 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011900.1 MGP_NODShiLtJ_G0010008.1 mouse_genomes_project 1 55096945 55097385 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002850.1 MGP_NODShiLtJ_G0002682.1 mouse_genomes_project 1 154576632 154578652 + antisense antisense MGP_NODShiLtJ_T0005970.1 MGP_NODShiLtJ_G0004993.1 mouse_genomes_project 1 211788976 211795469 + 4930488B22Rik lincRNA lincRNA MGP_NODShiLtJ_T0011812.1 MGP_NODShiLtJ_G0009920.1 mouse_genomes_project 1 25524657 25525466 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012102.1 MGP_NODShiLtJ_G0010210.1 mouse_genomes_project 1 141175740 141177038 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021948.1 MGP_NODShiLtJ_G0016359.1 mouse_genomes_project 1 152635655 152675470 - MGP_NODShiLtJ_P0021948 Sox13 protein_coding protein_coding MGP_NODShiLtJ_T0021949.1 MGP_NODShiLtJ_G0016359.1 mouse_genomes_project 1 152635982 152637512 - Sox13 protein_coding retained_intron MGP_NODShiLtJ_T0021950.1 MGP_NODShiLtJ_G0016359.1 mouse_genomes_project 1 152636537 152638420 - Sox13 protein_coding retained_intron MGP_NODShiLtJ_T0000624.1 MGP_NODShiLtJ_G0000559.1 mouse_genomes_project 1 154203395 154211005 - TEC TEC MGP_NODShiLtJ_T0019013.1 MGP_NODShiLtJ_G0015771.1 mouse_genomes_project 1 36912747 36970304 - MGP_NODShiLtJ_P0019013 Bend6 protein_coding protein_coding MGP_NODShiLtJ_T0019014.1 MGP_NODShiLtJ_G0015771.1 mouse_genomes_project 1 36912747 36944964 - MGP_NODShiLtJ_P0019014 Bend6 protein_coding protein_coding MGP_NODShiLtJ_T0019015.1 MGP_NODShiLtJ_G0015771.1 mouse_genomes_project 1 36923376 36944884 - Bend6 protein_coding processed_transcript MGP_NODShiLtJ_T0019016.1 MGP_NODShiLtJ_G0015771.1 mouse_genomes_project 1 36923860 36945246 - Bend6 protein_coding retained_intron MGP_NODShiLtJ_T0019017.1 MGP_NODShiLtJ_G0015771.1 mouse_genomes_project 1 36935167 36944894 - Bend6 protein_coding processed_transcript MGP_NODShiLtJ_T0000733.1 MGP_NODShiLtJ_G0000667.1 mouse_genomes_project 1 203352027 203353559 - TEC TEC MGP_NODShiLtJ_T0000374.1 MGP_NODShiLtJ_G0000312.1 mouse_genomes_project 1 12128738 12129434 - TEC TEC MGP_NODShiLtJ_T0002929.1 MGP_NODShiLtJ_G0002746.1 mouse_genomes_project 1 212567168 212580521 - 9630028B13Rik antisense antisense MGP_NODShiLtJ_T0000439.1 MGP_NODShiLtJ_G0000375.1 mouse_genomes_project 1 40747020 40747554 - TEC TEC MGP_NODShiLtJ_T0019584.1 MGP_NODShiLtJ_G0015876.1 mouse_genomes_project 1 59004151 59035933 - MGP_NODShiLtJ_P0019584 Inpp1 protein_coding protein_coding MGP_NODShiLtJ_T0019585.1 MGP_NODShiLtJ_G0015876.1 mouse_genomes_project 1 59007983 59017810 - MGP_NODShiLtJ_P0019585 Inpp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019586.1 MGP_NODShiLtJ_G0015876.1 mouse_genomes_project 1 59008371 59013370 - Inpp1 protein_coding retained_intron MGP_NODShiLtJ_T0019587.1 MGP_NODShiLtJ_G0015876.1 mouse_genomes_project 1 59012986 59035813 - MGP_NODShiLtJ_P0019587 Inpp1 protein_coding protein_coding MGP_NODShiLtJ_T0019588.1 MGP_NODShiLtJ_G0015876.1 mouse_genomes_project 1 59015300 59035696 - Inpp1 protein_coding retained_intron MGP_NODShiLtJ_T0019589.1 MGP_NODShiLtJ_G0015876.1 mouse_genomes_project 1 59015387 59018693 - MGP_NODShiLtJ_P0019589 Inpp1 protein_coding protein_coding MGP_NODShiLtJ_T0009448.1 MGP_NODShiLtJ_G0007581.1 mouse_genomes_project 1 173395649 173395761 - Gm44329 miRNA miRNA MGP_NODShiLtJ_T0018769.1 MGP_NODShiLtJ_G0015712.1 mouse_genomes_project 1 12530717 12578302 + MGP_NODShiLtJ_P0018769 Xkr9 protein_coding protein_coding MGP_NODShiLtJ_T0011742.1 MGP_NODShiLtJ_G0009850.1 mouse_genomes_project 1 2767034 2768996 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016961.1 MGP_NODShiLtJ_G0014993.1 mouse_genomes_project 1 195222542 195224063 - Gm15852 processed_transcript processed_transcript MGP_NODShiLtJ_T0022299.1 MGP_NODShiLtJ_G0016436.1 mouse_genomes_project 1 164997824 165046135 + MGP_NODShiLtJ_P0022299 Uchl5 protein_coding protein_coding MGP_NODShiLtJ_T0022300.1 MGP_NODShiLtJ_G0016436.1 mouse_genomes_project 1 164997828 165004799 + Uchl5 protein_coding retained_intron MGP_NODShiLtJ_T0022301.1 MGP_NODShiLtJ_G0016436.1 mouse_genomes_project 1 164997833 165046296 + MGP_NODShiLtJ_P0022301 Uchl5 protein_coding protein_coding MGP_NODShiLtJ_T0022302.1 MGP_NODShiLtJ_G0016436.1 mouse_genomes_project 1 164997857 165006581 + Uchl5 protein_coding retained_intron MGP_NODShiLtJ_T0022303.1 MGP_NODShiLtJ_G0016436.1 mouse_genomes_project 1 164997873 165036123 + MGP_NODShiLtJ_P0022303 Uchl5 protein_coding protein_coding MGP_NODShiLtJ_T0022304.1 MGP_NODShiLtJ_G0016436.1 mouse_genomes_project 1 165004181 165016655 + Uchl5 protein_coding retained_intron MGP_NODShiLtJ_T0022305.1 MGP_NODShiLtJ_G0016436.1 mouse_genomes_project 1 165016593 165044755 + MGP_NODShiLtJ_P0022305 Uchl5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098520.1 MGP_NODShiLtJ_G0036914.1 mouse_genomes_project 1 39009732 39009837 + Gm25634 snRNA snRNA MGP_NODShiLtJ_T0099787.1 MGP_NODShiLtJ_G0038181.1 mouse_genomes_project 1 122710198 122710330 + Gm22438 snoRNA snoRNA MGP_NODShiLtJ_T0005985.1 MGP_NODShiLtJ_G0005006.1 mouse_genomes_project 1 217954250 217968636 + Gm29678 lincRNA lincRNA MGP_NODShiLtJ_T0005779.1 MGP_NODShiLtJ_G0004843.1 mouse_genomes_project 1 103049861 103061771 + Gm28380 lincRNA lincRNA MGP_NODShiLtJ_T0021001.1 MGP_NODShiLtJ_G0016143.1 mouse_genomes_project 1 98952698 99341804 + MGP_NODShiLtJ_P0021001 protein_coding protein_coding MGP_NODShiLtJ_T0021002.1 MGP_NODShiLtJ_G0016143.1 mouse_genomes_project 1 98952721 99344403 + MGP_NODShiLtJ_P0021002 protein_coding protein_coding MGP_NODShiLtJ_T0021003.1 MGP_NODShiLtJ_G0016143.1 mouse_genomes_project 1 98952781 99341736 + MGP_NODShiLtJ_P0021003 protein_coding protein_coding MGP_NODShiLtJ_T0023778.1 MGP_NODShiLtJ_G0016759.1 mouse_genomes_project 1 209108369 209116059 + MGP_NODShiLtJ_P0023778 Srp9 protein_coding protein_coding MGP_NODShiLtJ_T0023779.1 MGP_NODShiLtJ_G0016759.1 mouse_genomes_project 1 209108382 209116547 + MGP_NODShiLtJ_P0023779 Srp9 protein_coding protein_coding MGP_NODShiLtJ_T0023780.1 MGP_NODShiLtJ_G0016759.1 mouse_genomes_project 1 209108413 209112721 + Srp9 protein_coding retained_intron MGP_NODShiLtJ_T0023781.1 MGP_NODShiLtJ_G0016759.1 mouse_genomes_project 1 209114888 209115945 + Srp9 protein_coding retained_intron MGP_NODShiLtJ_T0011868.1 MGP_NODShiLtJ_G0009976.1 mouse_genomes_project 1 47804389 47805668 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000709.1 MGP_NODShiLtJ_G0000643.1 mouse_genomes_project 1 189310862 189314966 + TEC TEC MGP_NODShiLtJ_T0018941.1 MGP_NODShiLtJ_G0015756.1 mouse_genomes_project 1 24660880 24870207 - Col19a1 protein_coding processed_transcript MGP_NODShiLtJ_T0018942.1 MGP_NODShiLtJ_G0015756.1 mouse_genomes_project 1 24662984 25029184 - MGP_NODShiLtJ_P0018942 Col19a1 protein_coding protein_coding MGP_NODShiLtJ_T0018943.1 MGP_NODShiLtJ_G0015756.1 mouse_genomes_project 1 24679849 25029123 - MGP_NODShiLtJ_P0018943 Col19a1 protein_coding protein_coding MGP_NODShiLtJ_T0098546.1 MGP_NODShiLtJ_G0036940.1 mouse_genomes_project 1 105378529 105378631 - Gm22089 snRNA snRNA MGP_NODShiLtJ_T0019673.1 MGP_NODShiLtJ_G0015894.1 mouse_genomes_project 1 61750296 61771105 + MGP_NODShiLtJ_P0019673 Coq10b protein_coding protein_coding MGP_NODShiLtJ_T0019674.1 MGP_NODShiLtJ_G0015894.1 mouse_genomes_project 1 61750296 61770356 + MGP_NODShiLtJ_P0019674 Coq10b protein_coding protein_coding MGP_NODShiLtJ_T0019675.1 MGP_NODShiLtJ_G0015894.1 mouse_genomes_project 1 61750395 61751620 + Coq10b protein_coding retained_intron MGP_NODShiLtJ_T0019676.1 MGP_NODShiLtJ_G0015894.1 mouse_genomes_project 1 61757091 61759210 + Coq10b protein_coding retained_intron MGP_NODShiLtJ_T0022097.1 MGP_NODShiLtJ_G0016394.1 mouse_genomes_project 1 154763836 154820549 + MGP_NODShiLtJ_P0022097 Lmod1 protein_coding protein_coding MGP_NODShiLtJ_T0020639.1 MGP_NODShiLtJ_G0016068.1 mouse_genomes_project 1 88389015 88403145 + MGP_NODShiLtJ_P0020639 Utp14b protein_coding protein_coding MGP_NODShiLtJ_T0020640.1 MGP_NODShiLtJ_G0016068.1 mouse_genomes_project 1 88389417 88398562 + MGP_NODShiLtJ_P0020640 Utp14b protein_coding protein_coding MGP_NODShiLtJ_T0101486.1 MGP_NODShiLtJ_G0039656.1 mouse_genomes_project 1 99195059 99195842 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000764.1 MGP_NODShiLtJ_G0000696.1 mouse_genomes_project 1 213958566 213960445 - TEC TEC MGP_NODShiLtJ_T0019304.1 MGP_NODShiLtJ_G0015822.1 mouse_genomes_project 1 42898185 42904086 + MGP_NODShiLtJ_P0019304 Rpl31 protein_coding protein_coding MGP_NODShiLtJ_T0019305.1 MGP_NODShiLtJ_G0015822.1 mouse_genomes_project 1 42898221 42903541 + MGP_NODShiLtJ_P0019305 Rpl31 protein_coding protein_coding MGP_NODShiLtJ_T0019306.1 MGP_NODShiLtJ_G0015822.1 mouse_genomes_project 1 42898272 42903539 + MGP_NODShiLtJ_P0019306 Rpl31 protein_coding protein_coding MGP_NODShiLtJ_T0019307.1 MGP_NODShiLtJ_G0015822.1 mouse_genomes_project 1 42898272 42903540 + MGP_NODShiLtJ_P0019307 Rpl31 protein_coding protein_coding MGP_NODShiLtJ_T0019308.1 MGP_NODShiLtJ_G0015822.1 mouse_genomes_project 1 42898492 42903508 + MGP_NODShiLtJ_P0019308 Rpl31 protein_coding protein_coding MGP_NODShiLtJ_T0019309.1 MGP_NODShiLtJ_G0015822.1 mouse_genomes_project 1 42902024 42903541 + Rpl31 protein_coding retained_intron MGP_NODShiLtJ_T0000689.1 MGP_NODShiLtJ_G0000623.1 mouse_genomes_project 1 183923771 183926008 + TEC TEC MGP_NODShiLtJ_T0002872.1 MGP_NODShiLtJ_G0002700.1 mouse_genomes_project 1 180213020 180214514 + 4930518J20Rik antisense antisense MGP_NODShiLtJ_T0000361.1 MGP_NODShiLtJ_G0000299.1 mouse_genomes_project 1 7438874 7440971 - TEC TEC MGP_NODShiLtJ_T0020004.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760472 70763379 + MGP_NODShiLtJ_P0020004 Eef1b2 protein_coding protein_coding MGP_NODShiLtJ_T0020005.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760776 70763010 + MGP_NODShiLtJ_P0020005 Eef1b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020006.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760777 70763304 + MGP_NODShiLtJ_P0020006 Eef1b2 protein_coding protein_coding MGP_NODShiLtJ_T0020007.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760778 70762157 + Eef1b2 protein_coding processed_transcript MGP_NODShiLtJ_T0020008.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760792 70763270 + MGP_NODShiLtJ_P0020008 Eef1b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020009.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760792 70763216 + MGP_NODShiLtJ_P0020009 Eef1b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020010.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760794 70762071 + Eef1b2 protein_coding processed_transcript MGP_NODShiLtJ_T0020011.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760832 70762527 + MGP_NODShiLtJ_P0020011 Eef1b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020012.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760859 70777058 + MGP_NODShiLtJ_P0020012 Eef1b2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020013.1 MGP_NODShiLtJ_G0015953.1 mouse_genomes_project 1 70760870 70762546 + MGP_NODShiLtJ_P0020013 Eef1b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011791.1 MGP_NODShiLtJ_G0009899.1 mouse_genomes_project 1 17380334 17397314 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021519.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136325046 136548043 - MGP_NODShiLtJ_P0021519 Gli2 protein_coding protein_coding MGP_NODShiLtJ_T0021520.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136339394 136547763 - MGP_NODShiLtJ_P0021520 Gli2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021521.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136339394 136547763 - MGP_NODShiLtJ_P0021521 Gli2 protein_coding protein_coding MGP_NODShiLtJ_T0021522.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136339394 136547763 - MGP_NODShiLtJ_P0021522 Gli2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021523.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136339394 136547763 - MGP_NODShiLtJ_P0021523 Gli2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021524.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136339394 136547763 - MGP_NODShiLtJ_P0021524 Gli2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021525.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136339396 136547763 - MGP_NODShiLtJ_P0021525 Gli2 protein_coding protein_coding MGP_NODShiLtJ_T0021526.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136339396 136547763 - MGP_NODShiLtJ_P0021526 Gli2 protein_coding protein_coding MGP_NODShiLtJ_T0021527.1 MGP_NODShiLtJ_G0016265.1 mouse_genomes_project 1 136360992 136475906 - Gli2 protein_coding processed_transcript MGP_NODShiLtJ_T0005821.1 MGP_NODShiLtJ_G0004877.1 mouse_genomes_project 1 138449287 138454410 + Gm29346 lincRNA lincRNA MGP_NODShiLtJ_T0000705.1 MGP_NODShiLtJ_G0000639.1 mouse_genomes_project 1 186425141 186429901 - TEC TEC MGP_NODShiLtJ_T0011892.1 MGP_NODShiLtJ_G0010000.1 mouse_genomes_project 1 53444596 53445582 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019361.1 MGP_NODShiLtJ_G0015834.1 mouse_genomes_project 1 44090854 44117818 + MGP_NODShiLtJ_P0019361 Il18r1 protein_coding protein_coding MGP_NODShiLtJ_T0019362.1 MGP_NODShiLtJ_G0015834.1 mouse_genomes_project 1 44090978 44117820 + MGP_NODShiLtJ_P0019362 Il18r1 protein_coding protein_coding MGP_NODShiLtJ_T0019363.1 MGP_NODShiLtJ_G0015834.1 mouse_genomes_project 1 44091272 44117818 + MGP_NODShiLtJ_P0019363 Il18r1 protein_coding protein_coding MGP_NODShiLtJ_T0019364.1 MGP_NODShiLtJ_G0015834.1 mouse_genomes_project 1 44091308 44127294 + MGP_NODShiLtJ_P0019364 Il18r1 protein_coding protein_coding MGP_NODShiLtJ_T0019365.1 MGP_NODShiLtJ_G0015834.1 mouse_genomes_project 1 44091308 44127295 + MGP_NODShiLtJ_P0019365 Il18r1 protein_coding protein_coding MGP_NODShiLtJ_T0019366.1 MGP_NODShiLtJ_G0015834.1 mouse_genomes_project 1 44091308 44127274 + MGP_NODShiLtJ_P0019366 Il18r1 protein_coding protein_coding MGP_NODShiLtJ_T0023465.1 MGP_NODShiLtJ_G0016686.1 mouse_genomes_project 1 199900850 199952176 - MGP_NODShiLtJ_P0023465 Ifi202b protein_coding protein_coding MGP_NODShiLtJ_T0023896.1 MGP_NODShiLtJ_G0016788.1 mouse_genomes_project 1 213864732 213952182 - MGP_NODShiLtJ_P0023896 Tgfb2 protein_coding protein_coding MGP_NODShiLtJ_T0023897.1 MGP_NODShiLtJ_G0016788.1 mouse_genomes_project 1 213866158 213951890 - MGP_NODShiLtJ_P0023897 Tgfb2 protein_coding protein_coding MGP_NODShiLtJ_T0023898.1 MGP_NODShiLtJ_G0016788.1 mouse_genomes_project 1 213867520 213892948 - Tgfb2 protein_coding retained_intron MGP_NODShiLtJ_T0023899.1 MGP_NODShiLtJ_G0016788.1 mouse_genomes_project 1 213871962 213893014 - Tgfb2 protein_coding retained_intron MGP_NODShiLtJ_T0023900.1 MGP_NODShiLtJ_G0016788.1 mouse_genomes_project 1 213875838 213912457 - Tgfb2 protein_coding processed_transcript MGP_NODShiLtJ_T0023901.1 MGP_NODShiLtJ_G0016788.1 mouse_genomes_project 1 213936988 213950486 - Tgfb2 protein_coding processed_transcript MGP_NODShiLtJ_T0005716.1 MGP_NODShiLtJ_G0004792.1 mouse_genomes_project 1 81200030 81247951 - 4933417E11Rik lincRNA lincRNA MGP_NODShiLtJ_T0021992.1 MGP_NODShiLtJ_G0016371.1 mouse_genomes_project 1 153500952 153509827 + MGP_NODShiLtJ_P0021992 Chil1 protein_coding protein_coding MGP_NODShiLtJ_T0021993.1 MGP_NODShiLtJ_G0016371.1 mouse_genomes_project 1 153501180 153509820 + MGP_NODShiLtJ_P0021993 Chil1 protein_coding protein_coding MGP_NODShiLtJ_T0021994.1 MGP_NODShiLtJ_G0016371.1 mouse_genomes_project 1 153501180 153509972 + MGP_NODShiLtJ_P0021994 Chil1 protein_coding protein_coding MGP_NODShiLtJ_T0021995.1 MGP_NODShiLtJ_G0016371.1 mouse_genomes_project 1 153501250 153506349 + MGP_NODShiLtJ_P0021995 Chil1 protein_coding protein_coding MGP_NODShiLtJ_T0021996.1 MGP_NODShiLtJ_G0016371.1 mouse_genomes_project 1 153501257 153506359 + MGP_NODShiLtJ_P0021996 Chil1 protein_coding protein_coding MGP_NODShiLtJ_T0021997.1 MGP_NODShiLtJ_G0016371.1 mouse_genomes_project 1 153501258 153506636 + Chil1 protein_coding retained_intron MGP_NODShiLtJ_T0021998.1 MGP_NODShiLtJ_G0016371.1 mouse_genomes_project 1 153502578 153506418 + Chil1 protein_coding retained_intron MGP_NODShiLtJ_T0021999.1 MGP_NODShiLtJ_G0016371.1 mouse_genomes_project 1 153508916 153509818 + Chil1 protein_coding retained_intron MGP_NODShiLtJ_T0101508.1 MGP_NODShiLtJ_G0039678.1 mouse_genomes_project 1 198836279 198837462 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012068.1 MGP_NODShiLtJ_G0010176.1 mouse_genomes_project 1 127523266 127524047 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023422.1 MGP_NODShiLtJ_G0016666.1 mouse_genomes_project 1 198505317 198506398 - MGP_NODShiLtJ_P0023422 Apcs protein_coding protein_coding MGP_NODShiLtJ_T0012196.1 MGP_NODShiLtJ_G0010304.1 mouse_genomes_project 1 190655579 190656369 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005602.1 MGP_NODShiLtJ_G0004710.1 mouse_genomes_project 1 22074121 22076682 + Gm26580 lincRNA lincRNA MGP_NODShiLtJ_T0016965.1 MGP_NODShiLtJ_G0014996.1 mouse_genomes_project 1 198114995 198128884 - 4933439K11Rik processed_transcript lincRNA MGP_NODShiLtJ_T0016966.1 MGP_NODShiLtJ_G0014996.1 mouse_genomes_project 1 198118509 198129021 - 4933439K11Rik processed_transcript lincRNA MGP_NODShiLtJ_T0016967.1 MGP_NODShiLtJ_G0014996.1 mouse_genomes_project 1 198127464 198136312 - 4933439K11Rik processed_transcript antisense MGP_NODShiLtJ_T0005592.1 MGP_NODShiLtJ_G0004700.1 mouse_genomes_project 1 11434614 11435467 - Gm29663 lincRNA lincRNA MGP_NODShiLtJ_T0023866.1 MGP_NODShiLtJ_G0016780.1 mouse_genomes_project 1 211965868 211978246 - MGP_NODShiLtJ_P0023866 C130074G19Rik protein_coding protein_coding MGP_NODShiLtJ_T0011859.1 MGP_NODShiLtJ_G0009967.1 mouse_genomes_project 1 41976234 41976763 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011155.1 MGP_NODShiLtJ_G0009288.1 mouse_genomes_project 1 223189849 223189947 - Gm27940 misc_RNA misc_RNA MGP_NODShiLtJ_T0023717.1 MGP_NODShiLtJ_G0016748.1 mouse_genomes_project 1 207811590 207822250 + MGP_NODShiLtJ_P0023717 Tmem63a protein_coding protein_coding MGP_NODShiLtJ_T0023718.1 MGP_NODShiLtJ_G0016748.1 mouse_genomes_project 1 207811704 207824950 + MGP_NODShiLtJ_P0023718 Tmem63a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023719.1 MGP_NODShiLtJ_G0016748.1 mouse_genomes_project 1 207811705 207846905 + MGP_NODShiLtJ_P0023719 Tmem63a protein_coding protein_coding MGP_NODShiLtJ_T0023720.1 MGP_NODShiLtJ_G0016748.1 mouse_genomes_project 1 207811820 207827228 + MGP_NODShiLtJ_P0023720 Tmem63a protein_coding protein_coding MGP_NODShiLtJ_T0023721.1 MGP_NODShiLtJ_G0016748.1 mouse_genomes_project 1 207813281 207846896 + MGP_NODShiLtJ_P0023721 Tmem63a protein_coding protein_coding MGP_NODShiLtJ_T0023722.1 MGP_NODShiLtJ_G0016748.1 mouse_genomes_project 1 207815152 207815961 + MGP_NODShiLtJ_P0023722 Tmem63a protein_coding protein_coding MGP_NODShiLtJ_T0023723.1 MGP_NODShiLtJ_G0016748.1 mouse_genomes_project 1 207815208 207818091 + MGP_NODShiLtJ_P0023723 Tmem63a protein_coding protein_coding MGP_NODShiLtJ_T0023724.1 MGP_NODShiLtJ_G0016748.1 mouse_genomes_project 1 207831289 207832064 + Tmem63a protein_coding retained_intron MGP_NODShiLtJ_T0012241.1 MGP_NODShiLtJ_G0010349.1 mouse_genomes_project 1 214340092 214340417 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023479.1 MGP_NODShiLtJ_G0016697.1 mouse_genomes_project 1 200261080 200262168 - MGP_NODShiLtJ_P0023479 Olfr419 protein_coding protein_coding MGP_NODShiLtJ_T0000682.1 MGP_NODShiLtJ_G0000616.1 mouse_genomes_project 1 181485777 181488173 - TEC TEC MGP_NODShiLtJ_T0018912.1 MGP_NODShiLtJ_G0015749.1 mouse_genomes_project 1 23372010 23373791 - MGP_NODShiLtJ_P0018912 4933415F23Rik protein_coding protein_coding MGP_NODShiLtJ_T0099821.1 MGP_NODShiLtJ_G0038215.1 mouse_genomes_project 1 187883244 187883366 + Gm22434 snoRNA snoRNA MGP_NODShiLtJ_T0011996.1 MGP_NODShiLtJ_G0010104.1 mouse_genomes_project 1 91010287 91010755 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011902.1 MGP_NODShiLtJ_G0010010.1 mouse_genomes_project 1 55820853 55830632 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098224.1 MGP_NODShiLtJ_G0036636.1 mouse_genomes_project 1 77884072 77899602 - Gm16076 sense_intronic sense_intronic MGP_NODShiLtJ_T0002726.1 MGP_NODShiLtJ_G0002590.1 mouse_genomes_project 1 37707646 37708155 - 1700101I19Rik antisense antisense MGP_NODShiLtJ_T0002727.1 MGP_NODShiLtJ_G0002590.1 mouse_genomes_project 1 37707668 37708057 - 1700101I19Rik antisense antisense MGP_NODShiLtJ_T0002804.1 MGP_NODShiLtJ_G0002649.1 mouse_genomes_project 1 102734844 102751104 - Gm17090 antisense antisense MGP_NODShiLtJ_T0005943.1 MGP_NODShiLtJ_G0004976.1 mouse_genomes_project 1 207611739 207617570 - Gm38293 lincRNA lincRNA MGP_NODShiLtJ_T0011875.1 MGP_NODShiLtJ_G0009983.1 mouse_genomes_project 1 48767407 48767827 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021714.1 MGP_NODShiLtJ_G0016305.1 mouse_genomes_project 1 149284783 149355370 - protein_coding retained_intron MGP_NODShiLtJ_T0021716.1 MGP_NODShiLtJ_G0016305.1 mouse_genomes_project 1 149351678 149397284 - protein_coding retained_intron MGP_NODShiLtJ_T0021717.1 MGP_NODShiLtJ_G0016305.1 mouse_genomes_project 1 149351678 149355985 - MGP_NODShiLtJ_P0021717 protein_coding protein_coding MGP_NODShiLtJ_T0021718.1 MGP_NODShiLtJ_G0016305.1 mouse_genomes_project 1 149368471 149397004 - protein_coding processed_transcript MGP_NODShiLtJ_T0012207.1 MGP_NODShiLtJ_G0010315.1 mouse_genomes_project 1 194815524 194816671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018959.1 MGP_NODShiLtJ_G0015759.1 mouse_genomes_project 1 27572862 27584421 - MGP_NODShiLtJ_P0018959 4931408C20Rik protein_coding protein_coding MGP_NODShiLtJ_T0000669.1 MGP_NODShiLtJ_G0000603.1 mouse_genomes_project 1 177641400 177643968 - TEC TEC MGP_NODShiLtJ_T0023725.1 MGP_NODShiLtJ_G0016749.1 mouse_genomes_project 1 207848002 207869312 - MGP_NODShiLtJ_P0023725 Ephx1 protein_coding protein_coding MGP_NODShiLtJ_T0023726.1 MGP_NODShiLtJ_G0016749.1 mouse_genomes_project 1 207862724 207890572 - MGP_NODShiLtJ_P0023726 Ephx1 protein_coding protein_coding MGP_NODShiLtJ_T0023727.1 MGP_NODShiLtJ_G0016749.1 mouse_genomes_project 1 207862724 207890572 - MGP_NODShiLtJ_P0023727 Ephx1 protein_coding protein_coding MGP_NODShiLtJ_T0023728.1 MGP_NODShiLtJ_G0016749.1 mouse_genomes_project 1 207869290 207893903 - MGP_NODShiLtJ_P0023728 Ephx1 protein_coding protein_coding MGP_NODShiLtJ_T0022809.1 MGP_NODShiLtJ_G0016527.1 mouse_genomes_project 1 186615381 186619631 + MGP_NODShiLtJ_P0022809 Pigc protein_coding protein_coding MGP_NODShiLtJ_T0022810.1 MGP_NODShiLtJ_G0016527.1 mouse_genomes_project 1 186615383 186618526 + MGP_NODShiLtJ_P0022810 Pigc protein_coding protein_coding MGP_NODShiLtJ_T0022811.1 MGP_NODShiLtJ_G0016527.1 mouse_genomes_project 1 186615423 186619630 + MGP_NODShiLtJ_P0022811 Pigc protein_coding protein_coding MGP_NODShiLtJ_T0022812.1 MGP_NODShiLtJ_G0016527.1 mouse_genomes_project 1 186615494 186617068 + MGP_NODShiLtJ_P0022812 Pigc protein_coding protein_coding MGP_NODShiLtJ_T0022813.1 MGP_NODShiLtJ_G0016527.1 mouse_genomes_project 1 186615497 186616727 + MGP_NODShiLtJ_P0022813 Pigc protein_coding protein_coding MGP_NODShiLtJ_T0011817.1 MGP_NODShiLtJ_G0009925.1 mouse_genomes_project 1 28506339 28506756 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012108.1 MGP_NODShiLtJ_G0010216.1 mouse_genomes_project 1 142952854 142953257 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012166.1 MGP_NODShiLtJ_G0010274.1 mouse_genomes_project 1 175997660 175998112 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021565.1 MGP_NODShiLtJ_G0016276.1 mouse_genomes_project 1 137755468 137830053 + MGP_NODShiLtJ_P0021565 3110009E18Rik protein_coding protein_coding MGP_NODShiLtJ_T0021566.1 MGP_NODShiLtJ_G0016276.1 mouse_genomes_project 1 137755476 137830053 + MGP_NODShiLtJ_P0021566 3110009E18Rik protein_coding protein_coding MGP_NODShiLtJ_T0021567.1 MGP_NODShiLtJ_G0016276.1 mouse_genomes_project 1 137755481 137830053 + MGP_NODShiLtJ_P0021567 3110009E18Rik protein_coding protein_coding MGP_NODShiLtJ_T0021568.1 MGP_NODShiLtJ_G0016276.1 mouse_genomes_project 1 137787786 137803376 + 3110009E18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0021569.1 MGP_NODShiLtJ_G0016276.1 mouse_genomes_project 1 137787858 137807426 + MGP_NODShiLtJ_P0021569 3110009E18Rik protein_coding protein_coding MGP_NODShiLtJ_T0021570.1 MGP_NODShiLtJ_G0016276.1 mouse_genomes_project 1 137797750 137812763 + 3110009E18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0012118.1 MGP_NODShiLtJ_G0010226.1 mouse_genomes_project 1 150456055 150456311 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000676.1 MGP_NODShiLtJ_G0000610.1 mouse_genomes_project 1 180513801 180518878 + TEC TEC MGP_NODShiLtJ_T0000406.1 MGP_NODShiLtJ_G0000343.1 mouse_genomes_project 1 26321429 26327861 - TEC TEC MGP_NODShiLtJ_T0101003.1 MGP_NODShiLtJ_G0039395.1 mouse_genomes_project 1 40087012 40087322 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101004.1 MGP_NODShiLtJ_G0039395.1 mouse_genomes_project 1 40087167 40088024 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0020395.1 MGP_NODShiLtJ_G0016031.1 mouse_genomes_project 1 84369568 84373494 - MGP_NODShiLtJ_P0020395 Fev protein_coding protein_coding MGP_NODShiLtJ_T0020396.1 MGP_NODShiLtJ_G0016031.1 mouse_genomes_project 1 84370065 84373397 - MGP_NODShiLtJ_P0020396 Fev protein_coding protein_coding MGP_NODShiLtJ_T0020397.1 MGP_NODShiLtJ_G0016031.1 mouse_genomes_project 1 84370466 84372688 - Fev protein_coding retained_intron MGP_NODShiLtJ_T0019513.1 MGP_NODShiLtJ_G0015868.1 mouse_genomes_project 1 57576236 57589300 - MGP_NODShiLtJ_P0019513 Nabp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019514.1 MGP_NODShiLtJ_G0015868.1 mouse_genomes_project 1 57576381 57588967 - MGP_NODShiLtJ_P0019514 Nabp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019515.1 MGP_NODShiLtJ_G0015868.1 mouse_genomes_project 1 57579065 57589300 - MGP_NODShiLtJ_P0019515 Nabp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019516.1 MGP_NODShiLtJ_G0015868.1 mouse_genomes_project 1 57579863 57589300 - MGP_NODShiLtJ_P0019516 Nabp1 protein_coding protein_coding MGP_NODShiLtJ_T0019517.1 MGP_NODShiLtJ_G0015868.1 mouse_genomes_project 1 57581182 57589300 - MGP_NODShiLtJ_P0019517 Nabp1 protein_coding protein_coding MGP_NODShiLtJ_T0019518.1 MGP_NODShiLtJ_G0015868.1 mouse_genomes_project 1 57581504 57589326 - MGP_NODShiLtJ_P0019518 Nabp1 protein_coding protein_coding MGP_NODShiLtJ_T0019519.1 MGP_NODShiLtJ_G0015868.1 mouse_genomes_project 1 57581517 57589300 - MGP_NODShiLtJ_P0019519 Nabp1 protein_coding protein_coding MGP_NODShiLtJ_T0019520.1 MGP_NODShiLtJ_G0015868.1 mouse_genomes_project 1 57586491 57589300 - Nabp1 protein_coding retained_intron MGP_NODShiLtJ_T0005831.1 MGP_NODShiLtJ_G0004884.1 mouse_genomes_project 1 140050099 140101748 + Gm28590 lincRNA lincRNA MGP_NODShiLtJ_T0012158.1 MGP_NODShiLtJ_G0010266.1 mouse_genomes_project 1 173340236 173342303 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000519.1 MGP_NODShiLtJ_G0000455.1 mouse_genomes_project 1 90235502 90250603 - TEC TEC MGP_NODShiLtJ_T0098514.1 MGP_NODShiLtJ_G0036908.1 mouse_genomes_project 1 34987328 34987435 - Gm25814 snRNA snRNA MGP_NODShiLtJ_T0005628.1 MGP_NODShiLtJ_G0004733.1 mouse_genomes_project 1 41594498 41623060 + Gm5099 lincRNA lincRNA MGP_NODShiLtJ_T0002829.1 MGP_NODShiLtJ_G0002667.1 mouse_genomes_project 1 146549873 146557831 + Gm28800 antisense antisense MGP_NODShiLtJ_T0012097.1 MGP_NODShiLtJ_G0010205.1 mouse_genomes_project 1 139239825 139240290 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012054.1 MGP_NODShiLtJ_G0010162.1 mouse_genomes_project 1 120660453 120661401 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021836.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151097047 151148626 - MGP_NODShiLtJ_P0021836 Mfsd4a protein_coding protein_coding MGP_NODShiLtJ_T0021837.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151097490 151103078 - Mfsd4a protein_coding retained_intron MGP_NODShiLtJ_T0021838.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151100733 151148680 - MGP_NODShiLtJ_P0021838 Mfsd4a protein_coding protein_coding MGP_NODShiLtJ_T0021839.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151100852 151148678 - MGP_NODShiLtJ_P0021839 Mfsd4a protein_coding protein_coding MGP_NODShiLtJ_T0021840.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151100852 151148541 - MGP_NODShiLtJ_P0021840 Mfsd4a protein_coding protein_coding MGP_NODShiLtJ_T0021841.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151100879 151148777 - MGP_NODShiLtJ_P0021841 Mfsd4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021842.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151113800 151148607 - MGP_NODShiLtJ_P0021842 Mfsd4a protein_coding protein_coding MGP_NODShiLtJ_T0021843.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151113809 151148648 - MGP_NODShiLtJ_P0021843 Mfsd4a protein_coding protein_coding MGP_NODShiLtJ_T0021844.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151115843 151118924 - Mfsd4a protein_coding processed_transcript MGP_NODShiLtJ_T0021845.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151115947 151148615 - MGP_NODShiLtJ_P0021845 Mfsd4a protein_coding protein_coding MGP_NODShiLtJ_T0021846.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151117674 151123565 - Mfsd4a protein_coding retained_intron MGP_NODShiLtJ_T0021847.1 MGP_NODShiLtJ_G0016337.1 mouse_genomes_project 1 151123442 151133729 - MGP_NODShiLtJ_P0021847 Mfsd4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002810.1 MGP_NODShiLtJ_G0002655.1 mouse_genomes_project 1 104439401 104456481 - 9430060I03Rik antisense antisense MGP_NODShiLtJ_T0011957.1 MGP_NODShiLtJ_G0010065.1 mouse_genomes_project 1 71538566 71539318 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002721.1 MGP_NODShiLtJ_G0002585.1 mouse_genomes_project 1 20207718 20250428 + 4930486I03Rik antisense antisense MGP_NODShiLtJ_T0000649.1 MGP_NODShiLtJ_G0000583.1 mouse_genomes_project 1 160372572 160375938 + TEC TEC MGP_NODShiLtJ_T0005958.1 MGP_NODShiLtJ_G0004987.1 mouse_genomes_project 1 210743898 210805384 + Gm34068 lincRNA lincRNA MGP_NODShiLtJ_T0012125.1 MGP_NODShiLtJ_G0010233.1 mouse_genomes_project 1 156028120 156028492 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012046.1 MGP_NODShiLtJ_G0010154.1 mouse_genomes_project 1 118853233 118853701 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011893.1 MGP_NODShiLtJ_G0010001.1 mouse_genomes_project 1 53732988 53733201 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021478.1 MGP_NODShiLtJ_G0016261.1 mouse_genomes_project 1 135752048 135772093 - MGP_NODShiLtJ_P0021478 Tsn protein_coding protein_coding MGP_NODShiLtJ_T0021479.1 MGP_NODShiLtJ_G0016261.1 mouse_genomes_project 1 135756919 135770915 - Tsn protein_coding retained_intron MGP_NODShiLtJ_T0021480.1 MGP_NODShiLtJ_G0016261.1 mouse_genomes_project 1 135758159 135770664 - Tsn protein_coding retained_intron MGP_NODShiLtJ_T0021481.1 MGP_NODShiLtJ_G0016261.1 mouse_genomes_project 1 135761837 135772139 - Tsn protein_coding processed_transcript MGP_NODShiLtJ_T0021482.1 MGP_NODShiLtJ_G0016261.1 mouse_genomes_project 1 135769384 135771913 - Tsn protein_coding retained_intron MGP_NODShiLtJ_T0021483.1 MGP_NODShiLtJ_G0016261.1 mouse_genomes_project 1 135771357 135773253 - Tsn protein_coding retained_intron MGP_NODShiLtJ_T0000724.1 MGP_NODShiLtJ_G0000658.1 mouse_genomes_project 1 198088893 198090460 + TEC TEC MGP_NODShiLtJ_T0009428.1 MGP_NODShiLtJ_G0007561.1 mouse_genomes_project 1 104801257 104801319 + Mir6901 miRNA miRNA MGP_NODShiLtJ_T0012231.1 MGP_NODShiLtJ_G0010339.1 mouse_genomes_project 1 208325004 208325297 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018731.1 MGP_NODShiLtJ_G0015705.1 mouse_genomes_project 1 9952940 10600740 + MGP_NODShiLtJ_P0018731 A830018L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0018732.1 MGP_NODShiLtJ_G0015705.1 mouse_genomes_project 1 9952947 10086932 + A830018L16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0018733.1 MGP_NODShiLtJ_G0015705.1 mouse_genomes_project 1 9952947 10105370 + A830018L16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0018734.1 MGP_NODShiLtJ_G0015705.1 mouse_genomes_project 1 9952947 10536331 + MGP_NODShiLtJ_P0018734 A830018L16Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018735.1 MGP_NODShiLtJ_G0015705.1 mouse_genomes_project 1 9953344 10600236 + MGP_NODShiLtJ_P0018735 A830018L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0018736.1 MGP_NODShiLtJ_G0015705.1 mouse_genomes_project 1 9953344 10600236 + MGP_NODShiLtJ_P0018736 A830018L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0018737.1 MGP_NODShiLtJ_G0015705.1 mouse_genomes_project 1 10086893 10181044 + MGP_NODShiLtJ_P0018737 A830018L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0018738.1 MGP_NODShiLtJ_G0015705.1 mouse_genomes_project 1 10147653 10166087 + A830018L16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0022050.1 MGP_NODShiLtJ_G0016384.1 mouse_genomes_project 1 154013233 154119024 + MGP_NODShiLtJ_P0022050 Syt2 protein_coding protein_coding MGP_NODShiLtJ_T0022051.1 MGP_NODShiLtJ_G0016384.1 mouse_genomes_project 1 154013237 154126573 + MGP_NODShiLtJ_P0022051 Syt2 protein_coding protein_coding MGP_NODShiLtJ_T0022052.1 MGP_NODShiLtJ_G0016384.1 mouse_genomes_project 1 154079160 154130301 + MGP_NODShiLtJ_P0022052 Syt2 protein_coding protein_coding MGP_NODShiLtJ_T0022053.1 MGP_NODShiLtJ_G0016384.1 mouse_genomes_project 1 154125739 154139758 + Syt2 protein_coding processed_transcript MGP_NODShiLtJ_T0020179.1 MGP_NODShiLtJ_G0015988.1 mouse_genomes_project 1 78709369 79232878 + Spag16 protein_coding processed_transcript MGP_NODShiLtJ_T0020180.1 MGP_NODShiLtJ_G0015988.1 mouse_genomes_project 1 78709370 79232779 + Spag16 protein_coding processed_transcript MGP_NODShiLtJ_T0020181.1 MGP_NODShiLtJ_G0015988.1 mouse_genomes_project 1 78709387 79837894 + MGP_NODShiLtJ_P0020181 Spag16 protein_coding protein_coding MGP_NODShiLtJ_T0020182.1 MGP_NODShiLtJ_G0015988.1 mouse_genomes_project 1 78709391 78820360 + MGP_NODShiLtJ_P0020182 Spag16 protein_coding protein_coding MGP_NODShiLtJ_T0020183.1 MGP_NODShiLtJ_G0015988.1 mouse_genomes_project 1 78717759 78764624 + Spag16 protein_coding processed_transcript MGP_NODShiLtJ_T0020184.1 MGP_NODShiLtJ_G0015988.1 mouse_genomes_project 1 78841208 79837894 + Spag16 protein_coding processed_transcript MGP_NODShiLtJ_T0020185.1 MGP_NODShiLtJ_G0015988.1 mouse_genomes_project 1 78841235 79248617 + Spag16 protein_coding processed_transcript MGP_NODShiLtJ_T0012013.1 MGP_NODShiLtJ_G0010121.1 mouse_genomes_project 1 97947719 97949237 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098474.1 MGP_NODShiLtJ_G0036873.1 mouse_genomes_project 1 46620730 46669790 + Gm20646 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0098475.1 MGP_NODShiLtJ_G0036873.1 mouse_genomes_project 1 46620730 46673613 + Gm20646 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0011983.1 MGP_NODShiLtJ_G0010091.1 mouse_genomes_project 1 84996164 84996512 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021016.1 MGP_NODShiLtJ_G0016150.1 mouse_genomes_project 1 99207579 99208630 - MGP_NODShiLtJ_P0021016 Dnajb3 protein_coding protein_coding MGP_NODShiLtJ_T0019623.1 MGP_NODShiLtJ_G0015885.1 mouse_genomes_project 1 59627239 59659778 - MGP_NODShiLtJ_P0019623 Gm28551 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002735.1 MGP_NODShiLtJ_G0002597.1 mouse_genomes_project 1 41307557 41314356 + Gm26805 antisense antisense MGP_NODShiLtJ_T0024058.1 MGP_NODShiLtJ_G0016820.1 mouse_genomes_project 1 219675623 219677037 - Traf5 protein_coding retained_intron MGP_NODShiLtJ_T0024059.1 MGP_NODShiLtJ_G0016820.1 mouse_genomes_project 1 219675623 219678391 - MGP_NODShiLtJ_P0024059 Traf5 protein_coding protein_coding MGP_NODShiLtJ_T0024060.1 MGP_NODShiLtJ_G0016820.1 mouse_genomes_project 1 219675848 219701236 - MGP_NODShiLtJ_P0024060 Traf5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024061.1 MGP_NODShiLtJ_G0016820.1 mouse_genomes_project 1 219675848 219725451 - MGP_NODShiLtJ_P0024061 Traf5 protein_coding protein_coding MGP_NODShiLtJ_T0024062.1 MGP_NODShiLtJ_G0016820.1 mouse_genomes_project 1 219685223 219689895 - MGP_NODShiLtJ_P0024062 Traf5 protein_coding protein_coding MGP_NODShiLtJ_T0024063.1 MGP_NODShiLtJ_G0016820.1 mouse_genomes_project 1 219686250 219689895 - Traf5 protein_coding retained_intron MGP_NODShiLtJ_T0000554.1 MGP_NODShiLtJ_G0000490.1 mouse_genomes_project 1 103376815 103380111 + TEC TEC MGP_NODShiLtJ_T0005597.1 MGP_NODShiLtJ_G0004705.1 mouse_genomes_project 1 17809199 17827966 + lincRNA lincRNA MGP_NODShiLtJ_T0002924.1 MGP_NODShiLtJ_G0002742.1 mouse_genomes_project 1 209465428 209475363 + Gm37885 antisense antisense MGP_NODShiLtJ_T0002925.1 MGP_NODShiLtJ_G0002742.1 mouse_genomes_project 1 209472910 209474490 + Gm37885 antisense antisense MGP_NODShiLtJ_T0005612.1 MGP_NODShiLtJ_G0004719.1 mouse_genomes_project 1 33519128 33520629 + Gm28644 lincRNA lincRNA MGP_NODShiLtJ_T0023081.1 MGP_NODShiLtJ_G0016587.1 mouse_genomes_project 1 193265132 193596786 - MGP_NODShiLtJ_P0023081 Pbx1 protein_coding protein_coding MGP_NODShiLtJ_T0023082.1 MGP_NODShiLtJ_G0016587.1 mouse_genomes_project 1 193301050 193596690 - MGP_NODShiLtJ_P0023082 Pbx1 protein_coding protein_coding MGP_NODShiLtJ_T0023083.1 MGP_NODShiLtJ_G0016587.1 mouse_genomes_project 1 193305673 193596543 - MGP_NODShiLtJ_P0023083 Pbx1 protein_coding protein_coding MGP_NODShiLtJ_T0023084.1 MGP_NODShiLtJ_G0016587.1 mouse_genomes_project 1 193305713 193312018 - Pbx1 protein_coding processed_transcript MGP_NODShiLtJ_T0023085.1 MGP_NODShiLtJ_G0016587.1 mouse_genomes_project 1 193306075 193596294 - MGP_NODShiLtJ_P0023085 Pbx1 protein_coding protein_coding MGP_NODShiLtJ_T0023086.1 MGP_NODShiLtJ_G0016587.1 mouse_genomes_project 1 193330741 193596786 - MGP_NODShiLtJ_P0023086 Pbx1 protein_coding protein_coding MGP_NODShiLtJ_T0023087.1 MGP_NODShiLtJ_G0016587.1 mouse_genomes_project 1 193355595 193596450 - Pbx1 protein_coding retained_intron MGP_NODShiLtJ_T0023088.1 MGP_NODShiLtJ_G0016587.1 mouse_genomes_project 1 193587785 193596786 - Pbx1 protein_coding retained_intron MGP_NODShiLtJ_T0009392.1 MGP_NODShiLtJ_G0007525.1 mouse_genomes_project 1 39978225 39978300 + Gm24133 miRNA miRNA MGP_NODShiLtJ_T0020704.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93055656 93083150 + MGP_NODShiLtJ_P0020704 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020705.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93055669 93083160 + MGP_NODShiLtJ_P0020705 Mff protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020706.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93055684 93066271 + Mff protein_coding processed_transcript MGP_NODShiLtJ_T0020707.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93055685 93083147 + MGP_NODShiLtJ_P0020707 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020708.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93055691 93083150 + MGP_NODShiLtJ_P0020708 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020709.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93055700 93067490 + Mff protein_coding retained_intron MGP_NODShiLtJ_T0020710.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93055706 93083110 + MGP_NODShiLtJ_P0020710 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020711.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93055714 93083154 + MGP_NODShiLtJ_P0020711 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020712.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93059995 93083150 + MGP_NODShiLtJ_P0020712 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020713.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93060038 93082389 + MGP_NODShiLtJ_P0020713 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020714.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93060092 93072629 + MGP_NODShiLtJ_P0020714 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020715.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93060092 93081328 + MGP_NODShiLtJ_P0020715 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020716.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93066233 93082920 + MGP_NODShiLtJ_P0020716 Mff protein_coding protein_coding MGP_NODShiLtJ_T0020717.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93072383 93082467 + Mff protein_coding retained_intron MGP_NODShiLtJ_T0020718.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93072722 93076644 + Mff protein_coding retained_intron MGP_NODShiLtJ_T0020719.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93077668 93082648 + Mff protein_coding retained_intron MGP_NODShiLtJ_T0020720.1 MGP_NODShiLtJ_G0016084.1 mouse_genomes_project 1 93079134 93082476 + Mff protein_coding retained_intron MGP_NODShiLtJ_T0000417.1 MGP_NODShiLtJ_G0000354.1 mouse_genomes_project 1 33308304 33313060 - TEC TEC MGP_NODShiLtJ_T0023613.1 MGP_NODShiLtJ_G0016730.1 mouse_genomes_project 1 206353777 206378827 + MGP_NODShiLtJ_P0023613 Sccpdh protein_coding protein_coding MGP_NODShiLtJ_T0023614.1 MGP_NODShiLtJ_G0016730.1 mouse_genomes_project 1 206353777 206378827 + MGP_NODShiLtJ_P0023614 Sccpdh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023615.1 MGP_NODShiLtJ_G0016730.1 mouse_genomes_project 1 206353827 206364083 + Sccpdh protein_coding retained_intron MGP_NODShiLtJ_T0023616.1 MGP_NODShiLtJ_G0016730.1 mouse_genomes_project 1 206371088 206378463 + MGP_NODShiLtJ_P0023616 Sccpdh protein_coding protein_coding MGP_NODShiLtJ_T0023617.1 MGP_NODShiLtJ_G0016730.1 mouse_genomes_project 1 206371117 206376129 + MGP_NODShiLtJ_P0023617 Sccpdh protein_coding protein_coding MGP_NODShiLtJ_T0023618.1 MGP_NODShiLtJ_G0016730.1 mouse_genomes_project 1 206375470 206378471 + Sccpdh protein_coding retained_intron MGP_NODShiLtJ_T0011869.1 MGP_NODShiLtJ_G0009977.1 mouse_genomes_project 1 47926980 47927525 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020470.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642494 84647263 + MGP_NODShiLtJ_P0020470 Stk16 protein_coding protein_coding MGP_NODShiLtJ_T0020471.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642502 84643528 + Stk16 protein_coding retained_intron MGP_NODShiLtJ_T0020472.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642504 84643892 + MGP_NODShiLtJ_P0020472 Stk16 protein_coding protein_coding MGP_NODShiLtJ_T0020473.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642526 84645899 + MGP_NODShiLtJ_P0020473 Stk16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020474.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642530 84643891 + MGP_NODShiLtJ_P0020474 Stk16 protein_coding protein_coding MGP_NODShiLtJ_T0020475.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642532 84645896 + Stk16 protein_coding retained_intron MGP_NODShiLtJ_T0020476.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642536 84644794 + Stk16 protein_coding processed_transcript MGP_NODShiLtJ_T0020477.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642710 84644885 + MGP_NODShiLtJ_P0020477 Stk16 protein_coding protein_coding MGP_NODShiLtJ_T0020478.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84642896 84645608 + MGP_NODShiLtJ_P0020478 Stk16 protein_coding protein_coding MGP_NODShiLtJ_T0020479.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84643618 84644844 + Stk16 protein_coding retained_intron MGP_NODShiLtJ_T0020480.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84643659 84644750 + Stk16 protein_coding retained_intron MGP_NODShiLtJ_T0020481.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84643661 84644062 + Stk16 protein_coding retained_intron MGP_NODShiLtJ_T0020482.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84644055 84644812 + Stk16 protein_coding retained_intron MGP_NODShiLtJ_T0020483.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84644280 84645673 + Stk16 protein_coding processed_transcript MGP_NODShiLtJ_T0020484.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84644288 84645570 + Stk16 protein_coding retained_intron MGP_NODShiLtJ_T0020485.1 MGP_NODShiLtJ_G0016044.1 mouse_genomes_project 1 84644717 84645688 + Stk16 protein_coding retained_intron MGP_NODShiLtJ_T0000402.1 MGP_NODShiLtJ_G0000339.1 mouse_genomes_project 1 25926117 25929872 - TEC TEC MGP_NODShiLtJ_T0020631.1 MGP_NODShiLtJ_G0016066.1 mouse_genomes_project 1 88228315 88247729 + MGP_NODShiLtJ_P0020631 Mogat1 protein_coding protein_coding MGP_NODShiLtJ_T0020632.1 MGP_NODShiLtJ_G0016066.1 mouse_genomes_project 1 88228484 88249269 + MGP_NODShiLtJ_P0020632 Mogat1 protein_coding protein_coding MGP_NODShiLtJ_T0020633.1 MGP_NODShiLtJ_G0016066.1 mouse_genomes_project 1 88228493 88259509 + MGP_NODShiLtJ_P0020633 Mogat1 protein_coding protein_coding MGP_NODShiLtJ_T0020634.1 MGP_NODShiLtJ_G0016066.1 mouse_genomes_project 1 88229136 88242539 + MGP_NODShiLtJ_P0020634 Mogat1 protein_coding protein_coding MGP_NODShiLtJ_T0020635.1 MGP_NODShiLtJ_G0016066.1 mouse_genomes_project 1 88229191 88259511 + MGP_NODShiLtJ_P0020635 Mogat1 protein_coding protein_coding MGP_NODShiLtJ_T0020636.1 MGP_NODShiLtJ_G0016066.1 mouse_genomes_project 1 88258965 88259511 + Mogat1 protein_coding processed_transcript MGP_NODShiLtJ_T0099799.1 MGP_NODShiLtJ_G0038193.1 mouse_genomes_project 1 156992503 156992600 - Gm23534 snoRNA snoRNA MGP_NODShiLtJ_T0023706.1 MGP_NODShiLtJ_G0016744.1 mouse_genomes_project 1 207711565 207732998 + MGP_NODShiLtJ_P0023706 Sde2 protein_coding protein_coding MGP_NODShiLtJ_T0023707.1 MGP_NODShiLtJ_G0016744.1 mouse_genomes_project 1 207711611 207732999 + MGP_NODShiLtJ_P0023707 Sde2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023708.1 MGP_NODShiLtJ_G0016744.1 mouse_genomes_project 1 207726984 207731138 + Sde2 protein_coding retained_intron MGP_NODShiLtJ_T0002722.1 MGP_NODShiLtJ_G0002586.1 mouse_genomes_project 1 20971712 20973347 + Gm28287 antisense antisense MGP_NODShiLtJ_T0020205.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80788235 80857385 - MGP_NODShiLtJ_P0020205 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0020206.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80788238 80857385 - MGP_NODShiLtJ_P0020206 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0020207.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80788238 80857385 - MGP_NODShiLtJ_P0020207 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0020208.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80788238 80857385 - MGP_NODShiLtJ_P0020208 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0020209.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80788239 80857388 - MGP_NODShiLtJ_P0020209 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0020210.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80788239 80857413 - MGP_NODShiLtJ_P0020210 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0020211.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80788239 80857385 - MGP_NODShiLtJ_P0020211 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0020212.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80788241 80812012 - Fn1 protein_coding retained_intron MGP_NODShiLtJ_T0020213.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80789576 80793787 - Fn1 protein_coding retained_intron MGP_NODShiLtJ_T0020214.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80792812 80803034 - MGP_NODShiLtJ_P0020214 Fn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020215.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80801025 80805042 - MGP_NODShiLtJ_P0020215 Fn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020216.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80803052 80805510 - Fn1 protein_coding retained_intron MGP_NODShiLtJ_T0020217.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80806762 80826788 - Fn1 protein_coding retained_intron MGP_NODShiLtJ_T0020218.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80831900 80843721 - MGP_NODShiLtJ_P0020218 Fn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020219.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80845257 80857374 - MGP_NODShiLtJ_P0020219 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0020220.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80846909 80857385 - Fn1 protein_coding retained_intron MGP_NODShiLtJ_T0020221.1 MGP_NODShiLtJ_G0015993.1 mouse_genomes_project 1 80849270 80857385 - MGP_NODShiLtJ_P0020221 Fn1 protein_coding protein_coding MGP_NODShiLtJ_T0011853.1 MGP_NODShiLtJ_G0009961.1 mouse_genomes_project 1 38120321 38120766 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021864.1 MGP_NODShiLtJ_G0016342.1 mouse_genomes_project 1 151441124 151458077 + MGP_NODShiLtJ_P0021864 Nuak2 protein_coding protein_coding MGP_NODShiLtJ_T0021865.1 MGP_NODShiLtJ_G0016342.1 mouse_genomes_project 1 151441124 151458272 + MGP_NODShiLtJ_P0021865 Nuak2 protein_coding protein_coding MGP_NODShiLtJ_T0021866.1 MGP_NODShiLtJ_G0016342.1 mouse_genomes_project 1 151441163 151442735 + Nuak2 protein_coding processed_transcript MGP_NODShiLtJ_T0021867.1 MGP_NODShiLtJ_G0016342.1 mouse_genomes_project 1 151452596 151455231 + Nuak2 protein_coding retained_intron MGP_NODShiLtJ_T0022545.1 MGP_NODShiLtJ_G0016483.1 mouse_genomes_project 1 179127920 179293981 - MGP_NODShiLtJ_P0022545 Xpr1 protein_coding protein_coding MGP_NODShiLtJ_T0022546.1 MGP_NODShiLtJ_G0016483.1 mouse_genomes_project 1 179131201 179294059 - MGP_NODShiLtJ_P0022546 Xpr1 protein_coding protein_coding MGP_NODShiLtJ_T0022547.1 MGP_NODShiLtJ_G0016483.1 mouse_genomes_project 1 179134402 179165150 - Xpr1 protein_coding retained_intron MGP_NODShiLtJ_T0022548.1 MGP_NODShiLtJ_G0016483.1 mouse_genomes_project 1 179134887 179294067 - MGP_NODShiLtJ_P0022548 Xpr1 protein_coding protein_coding MGP_NODShiLtJ_T0022549.1 MGP_NODShiLtJ_G0016483.1 mouse_genomes_project 1 179142844 179145585 - Xpr1 protein_coding retained_intron MGP_NODShiLtJ_T0022550.1 MGP_NODShiLtJ_G0016483.1 mouse_genomes_project 1 179192152 179294047 - Xpr1 protein_coding retained_intron MGP_NODShiLtJ_T0022551.1 MGP_NODShiLtJ_G0016483.1 mouse_genomes_project 1 179254850 179257921 - Xpr1 protein_coding processed_transcript MGP_NODShiLtJ_T0012109.1 MGP_NODShiLtJ_G0010217.1 mouse_genomes_project 1 144085867 144086496 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019907.1 MGP_NODShiLtJ_G0015937.1 mouse_genomes_project 1 67210058 67219462 - Ica1l protein_coding processed_transcript MGP_NODShiLtJ_T0019908.1 MGP_NODShiLtJ_G0015937.1 mouse_genomes_project 1 67217606 67277551 - MGP_NODShiLtJ_P0019908 Ica1l protein_coding protein_coding MGP_NODShiLtJ_T0019909.1 MGP_NODShiLtJ_G0015937.1 mouse_genomes_project 1 67217613 67277586 - MGP_NODShiLtJ_P0019909 Ica1l protein_coding protein_coding MGP_NODShiLtJ_T0019910.1 MGP_NODShiLtJ_G0015937.1 mouse_genomes_project 1 67219660 67260623 - MGP_NODShiLtJ_P0019910 Ica1l protein_coding protein_coding MGP_NODShiLtJ_T0019911.1 MGP_NODShiLtJ_G0015937.1 mouse_genomes_project 1 67247954 67254760 - Ica1l protein_coding retained_intron MGP_NODShiLtJ_T0000789.1 MGP_NODShiLtJ_G0000720.1 mouse_genomes_project 1 222936050 222938331 + TEC TEC MGP_NODShiLtJ_T0020393.1 MGP_NODShiLtJ_G0016029.1 mouse_genomes_project 1 84272633 84287110 + MGP_NODShiLtJ_P0020393 Wnt10a protein_coding protein_coding MGP_NODShiLtJ_T0002734.1 MGP_NODShiLtJ_G0002596.1 mouse_genomes_project 1 41045477 41046591 + 4930556I23Rik antisense antisense MGP_NODShiLtJ_T0019218.1 MGP_NODShiLtJ_G0015805.1 mouse_genomes_project 1 40862085 40962410 - MGP_NODShiLtJ_P0019218 Mgat4a protein_coding protein_coding MGP_NODShiLtJ_T0019219.1 MGP_NODShiLtJ_G0015805.1 mouse_genomes_project 1 40863355 40966966 - MGP_NODShiLtJ_P0019219 Mgat4a protein_coding protein_coding MGP_NODShiLtJ_T0019220.1 MGP_NODShiLtJ_G0015805.1 mouse_genomes_project 1 40883670 40919599 - MGP_NODShiLtJ_P0019220 Mgat4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019221.1 MGP_NODShiLtJ_G0015805.1 mouse_genomes_project 1 40883673 40919561 - MGP_NODShiLtJ_P0019221 Mgat4a protein_coding protein_coding MGP_NODShiLtJ_T0019222.1 MGP_NODShiLtJ_G0015805.1 mouse_genomes_project 1 40919191 40922304 - Mgat4a protein_coding retained_intron MGP_NODShiLtJ_T0019223.1 MGP_NODShiLtJ_G0015805.1 mouse_genomes_project 1 40959227 40962257 - Mgat4a protein_coding retained_intron MGP_NODShiLtJ_T0019162.1 MGP_NODShiLtJ_G0015797.1 mouse_genomes_project 1 40015696 40028386 - MGP_NODShiLtJ_P0019162 Actr1b protein_coding protein_coding MGP_NODShiLtJ_T0019163.1 MGP_NODShiLtJ_G0015797.1 mouse_genomes_project 1 40018795 40019234 - Actr1b protein_coding retained_intron MGP_NODShiLtJ_T0019164.1 MGP_NODShiLtJ_G0015797.1 mouse_genomes_project 1 40020049 40028325 - Actr1b protein_coding retained_intron MGP_NODShiLtJ_T0019165.1 MGP_NODShiLtJ_G0015797.1 mouse_genomes_project 1 40020140 40028056 - MGP_NODShiLtJ_P0019165 Actr1b protein_coding protein_coding MGP_NODShiLtJ_T0019166.1 MGP_NODShiLtJ_G0015797.1 mouse_genomes_project 1 40020161 40033916 - MGP_NODShiLtJ_P0019166 Actr1b protein_coding protein_coding MGP_NODShiLtJ_T0019167.1 MGP_NODShiLtJ_G0015797.1 mouse_genomes_project 1 40020859 40025545 - Actr1b protein_coding retained_intron MGP_NODShiLtJ_T0019168.1 MGP_NODShiLtJ_G0015797.1 mouse_genomes_project 1 40024925 40028297 - Actr1b protein_coding processed_transcript MGP_NODShiLtJ_T0021457.1 MGP_NODShiLtJ_G0016256.1 mouse_genomes_project 1 122342430 122362565 + MGP_NODShiLtJ_P0021457 Serpinb8 protein_coding protein_coding MGP_NODShiLtJ_T0021458.1 MGP_NODShiLtJ_G0016256.1 mouse_genomes_project 1 122342430 122363887 + MGP_NODShiLtJ_P0021458 Serpinb8 protein_coding protein_coding MGP_NODShiLtJ_T0021459.1 MGP_NODShiLtJ_G0016256.1 mouse_genomes_project 1 122342470 122359788 + Serpinb8 protein_coding retained_intron MGP_NODShiLtJ_T0021460.1 MGP_NODShiLtJ_G0016256.1 mouse_genomes_project 1 122359517 122360967 + MGP_NODShiLtJ_P0021460 Serpinb8 protein_coding protein_coding MGP_NODShiLtJ_T0023245.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196801003 196814951 + MGP_NODShiLtJ_P0023245 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0023246.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196801257 196814945 + MGP_NODShiLtJ_P0023246 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0023247.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196801266 196814306 + MGP_NODShiLtJ_P0023247 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0023248.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196801424 196812920 + MGP_NODShiLtJ_P0023248 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0023249.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196801465 196813575 + MGP_NODShiLtJ_P0023249 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0023250.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196802755 196811035 + MGP_NODShiLtJ_P0023250 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0023251.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196803032 196810964 + MGP_NODShiLtJ_P0023251 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0023252.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196804098 196814240 + MGP_NODShiLtJ_P0023252 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0023253.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196809434 196812757 + Dedd protein_coding retained_intron MGP_NODShiLtJ_T0023254.1 MGP_NODShiLtJ_G0016624.1 mouse_genomes_project 1 196810608 196812850 + MGP_NODShiLtJ_P0023254 Dedd protein_coding protein_coding MGP_NODShiLtJ_T0022955.1 MGP_NODShiLtJ_G0016560.1 mouse_genomes_project 1 190197816 190223958 - MGP_NODShiLtJ_P0022955 Tiprl protein_coding protein_coding MGP_NODShiLtJ_T0022956.1 MGP_NODShiLtJ_G0016560.1 mouse_genomes_project 1 190201108 190202055 - Tiprl protein_coding retained_intron MGP_NODShiLtJ_T0022957.1 MGP_NODShiLtJ_G0016560.1 mouse_genomes_project 1 190201252 190224011 - MGP_NODShiLtJ_P0022957 Tiprl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022958.1 MGP_NODShiLtJ_G0016560.1 mouse_genomes_project 1 190208845 190223937 - Tiprl protein_coding processed_transcript MGP_NODShiLtJ_T0022959.1 MGP_NODShiLtJ_G0016560.1 mouse_genomes_project 1 190213630 190223533 - MGP_NODShiLtJ_P0022959 Tiprl protein_coding protein_coding MGP_NODShiLtJ_T0022960.1 MGP_NODShiLtJ_G0016560.1 mouse_genomes_project 1 190214489 190223947 - Tiprl protein_coding processed_transcript MGP_NODShiLtJ_T0101258.1 MGP_NODShiLtJ_G0039542.1 mouse_genomes_project 1 109479083 109595795 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101259.1 MGP_NODShiLtJ_G0039542.1 mouse_genomes_project 1 109508676 109595455 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101514.1 MGP_NODShiLtJ_G0039684.1 mouse_genomes_project 1 200097270 200101641 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011923.1 MGP_NODShiLtJ_G0010031.1 mouse_genomes_project 1 62121435 62122330 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021080.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102408244 102523664 + MGP_NODShiLtJ_P0021080 Lrrfip1 protein_coding protein_coding MGP_NODShiLtJ_T0021081.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102408284 102542372 + MGP_NODShiLtJ_P0021081 Lrrfip1 protein_coding protein_coding MGP_NODShiLtJ_T0021082.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102408286 102548754 + MGP_NODShiLtJ_P0021082 Lrrfip1 protein_coding protein_coding MGP_NODShiLtJ_T0021083.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102467612 102548758 + MGP_NODShiLtJ_P0021083 Lrrfip1 protein_coding protein_coding MGP_NODShiLtJ_T0021084.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102467622 102537134 + MGP_NODShiLtJ_P0021084 Lrrfip1 protein_coding protein_coding MGP_NODShiLtJ_T0021085.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102467675 102548732 + MGP_NODShiLtJ_P0021085 Lrrfip1 protein_coding protein_coding MGP_NODShiLtJ_T0021086.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102467675 102515581 + MGP_NODShiLtJ_P0021086 Lrrfip1 protein_coding protein_coding MGP_NODShiLtJ_T0021087.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102467754 102548101 + MGP_NODShiLtJ_P0021087 Lrrfip1 protein_coding protein_coding MGP_NODShiLtJ_T0021088.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102526259 102536231 + Lrrfip1 protein_coding processed_transcript MGP_NODShiLtJ_T0021089.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102526278 102534168 + Lrrfip1 protein_coding processed_transcript MGP_NODShiLtJ_T0021090.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102539778 102542358 + Lrrfip1 protein_coding processed_transcript MGP_NODShiLtJ_T0021091.1 MGP_NODShiLtJ_G0016169.1 mouse_genomes_project 1 102545212 102547992 + Lrrfip1 protein_coding retained_intron MGP_NODShiLtJ_T0005613.1 MGP_NODShiLtJ_G0004720.1 mouse_genomes_project 1 36198164 36200876 - Gm37591 lincRNA lincRNA MGP_NODShiLtJ_T0012179.1 MGP_NODShiLtJ_G0010287.1 mouse_genomes_project 1 181708152 181708757 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000348.1 MGP_NODShiLtJ_G0000286.1 mouse_genomes_project 1 782699 786824 - TEC TEC MGP_NODShiLtJ_T0022198.1 MGP_NODShiLtJ_G0016413.1 mouse_genomes_project 1 155923426 155925948 + Ddx59 protein_coding retained_intron MGP_NODShiLtJ_T0022199.1 MGP_NODShiLtJ_G0016413.1 mouse_genomes_project 1 155923426 155951043 + MGP_NODShiLtJ_P0022199 Ddx59 protein_coding protein_coding MGP_NODShiLtJ_T0022200.1 MGP_NODShiLtJ_G0016413.1 mouse_genomes_project 1 155941067 155943310 + Ddx59 protein_coding processed_transcript MGP_NODShiLtJ_T0022201.1 MGP_NODShiLtJ_G0016413.1 mouse_genomes_project 1 155943286 155944951 + Ddx59 protein_coding retained_intron MGP_NODShiLtJ_T0098247.1 MGP_NODShiLtJ_G0036658.1 mouse_genomes_project 1 214386226 214389718 - Gm15509 sense_intronic sense_intronic MGP_NODShiLtJ_T0012020.1 MGP_NODShiLtJ_G0010128.1 mouse_genomes_project 1 102594652 102595372 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000565.1 MGP_NODShiLtJ_G0000501.1 mouse_genomes_project 1 119207699 119211599 + TEC TEC MGP_NODShiLtJ_T0020082.1 MGP_NODShiLtJ_G0015973.1 mouse_genomes_project 1 72887318 72907537 - MGP_NODShiLtJ_P0020082 D630023F18Rik protein_coding protein_coding MGP_NODShiLtJ_T0020083.1 MGP_NODShiLtJ_G0015973.1 mouse_genomes_project 1 72889346 72907516 - MGP_NODShiLtJ_P0020083 D630023F18Rik protein_coding protein_coding MGP_NODShiLtJ_T0020084.1 MGP_NODShiLtJ_G0015973.1 mouse_genomes_project 1 72890836 72907437 - MGP_NODShiLtJ_P0020084 D630023F18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024091.1 MGP_NODShiLtJ_G0016825.1 mouse_genomes_project 1 220581166 220752436 - MGP_NODShiLtJ_P0024091 Syt14 protein_coding protein_coding MGP_NODShiLtJ_T0024092.1 MGP_NODShiLtJ_G0016825.1 mouse_genomes_project 1 220585919 220752323 - MGP_NODShiLtJ_P0024092 Syt14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024093.1 MGP_NODShiLtJ_G0016825.1 mouse_genomes_project 1 220587143 220752378 - MGP_NODShiLtJ_P0024093 Syt14 protein_coding protein_coding MGP_NODShiLtJ_T0024094.1 MGP_NODShiLtJ_G0016825.1 mouse_genomes_project 1 220623365 220752305 - Syt14 protein_coding retained_intron MGP_NODShiLtJ_T0022801.1 MGP_NODShiLtJ_G0016525.1 mouse_genomes_project 1 186431847 186521861 - MGP_NODShiLtJ_P0022801 protein_coding protein_coding MGP_NODShiLtJ_T0022802.1 MGP_NODShiLtJ_G0016525.1 mouse_genomes_project 1 186436135 186438458 - protein_coding retained_intron MGP_NODShiLtJ_T0022803.1 MGP_NODShiLtJ_G0016525.1 mouse_genomes_project 1 186449540 186454679 - protein_coding retained_intron MGP_NODShiLtJ_T0022804.1 MGP_NODShiLtJ_G0016525.1 mouse_genomes_project 1 186472691 186485834 - protein_coding processed_transcript MGP_NODShiLtJ_T0022805.1 MGP_NODShiLtJ_G0016525.1 mouse_genomes_project 1 186476322 186485394 - protein_coding retained_intron MGP_NODShiLtJ_T0022806.1 MGP_NODShiLtJ_G0016525.1 mouse_genomes_project 1 186485888 186493493 - MGP_NODShiLtJ_P0022806 protein_coding protein_coding MGP_NODShiLtJ_T0021596.1 MGP_NODShiLtJ_G0016284.1 mouse_genomes_project 1 139273637 139290953 - MGP_NODShiLtJ_P0021596 Ddx18 protein_coding protein_coding MGP_NODShiLtJ_T0021597.1 MGP_NODShiLtJ_G0016284.1 mouse_genomes_project 1 139274783 139279902 - Ddx18 protein_coding retained_intron MGP_NODShiLtJ_T0021598.1 MGP_NODShiLtJ_G0016284.1 mouse_genomes_project 1 139278091 139280968 - MGP_NODShiLtJ_P0021598 Ddx18 protein_coding protein_coding MGP_NODShiLtJ_T0021599.1 MGP_NODShiLtJ_G0016284.1 mouse_genomes_project 1 139287670 139290800 - Ddx18 protein_coding processed_transcript MGP_NODShiLtJ_T0022834.1 MGP_NODShiLtJ_G0016530.1 mouse_genomes_project 1 187258037 187287370 + MGP_NODShiLtJ_P0022834 Vamp4 protein_coding protein_coding MGP_NODShiLtJ_T0022835.1 MGP_NODShiLtJ_G0016530.1 mouse_genomes_project 1 187258149 187269713 + Vamp4 protein_coding retained_intron MGP_NODShiLtJ_T0022836.1 MGP_NODShiLtJ_G0016530.1 mouse_genomes_project 1 187258163 187287369 + MGP_NODShiLtJ_P0022836 Vamp4 protein_coding protein_coding MGP_NODShiLtJ_T0022837.1 MGP_NODShiLtJ_G0016530.1 mouse_genomes_project 1 187258350 187287364 + MGP_NODShiLtJ_P0022837 Vamp4 protein_coding protein_coding MGP_NODShiLtJ_T0022838.1 MGP_NODShiLtJ_G0016530.1 mouse_genomes_project 1 187262343 187283047 + Vamp4 protein_coding processed_transcript MGP_NODShiLtJ_T0005780.1 MGP_NODShiLtJ_G0004844.1 mouse_genomes_project 1 103449598 103453106 + Gm26720 lincRNA lincRNA MGP_NODShiLtJ_T0099743.1 MGP_NODShiLtJ_G0038137.1 mouse_genomes_project 1 20803579 20803710 - Gm24171 snoRNA snoRNA MGP_NODShiLtJ_T0097860.1 MGP_NODShiLtJ_G0036272.1 mouse_genomes_project 1 92957172 92957270 + n-R5s213 rRNA rRNA MGP_NODShiLtJ_T0023101.1 MGP_NODShiLtJ_G0016592.1 mouse_genomes_project 1 195239818 195260757 - MGP_NODShiLtJ_P0023101 Hsd17b7 protein_coding protein_coding MGP_NODShiLtJ_T0023102.1 MGP_NODShiLtJ_G0016592.1 mouse_genomes_project 1 195243137 195257239 - Hsd17b7 protein_coding processed_transcript MGP_NODShiLtJ_T0023103.1 MGP_NODShiLtJ_G0016592.1 mouse_genomes_project 1 195245761 195260757 - MGP_NODShiLtJ_P0023103 Hsd17b7 protein_coding protein_coding MGP_NODShiLtJ_T0023104.1 MGP_NODShiLtJ_G0016592.1 mouse_genomes_project 1 195249689 195257666 - Hsd17b7 protein_coding processed_transcript MGP_NODShiLtJ_T0012096.1 MGP_NODShiLtJ_G0010204.1 mouse_genomes_project 1 139225150 139225369 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011819.1 MGP_NODShiLtJ_G0009927.1 mouse_genomes_project 1 29420492 29422365 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019971.1 MGP_NODShiLtJ_G0015947.1 mouse_genomes_project 1 69069254 69569641 + Pard3b protein_coding processed_transcript MGP_NODShiLtJ_T0019972.1 MGP_NODShiLtJ_G0015947.1 mouse_genomes_project 1 69069254 70185241 + MGP_NODShiLtJ_P0019972 Pard3b protein_coding protein_coding MGP_NODShiLtJ_T0019973.1 MGP_NODShiLtJ_G0015947.1 mouse_genomes_project 1 69069305 69214471 + Pard3b protein_coding retained_intron MGP_NODShiLtJ_T0019974.1 MGP_NODShiLtJ_G0015947.1 mouse_genomes_project 1 69069316 69675596 + Pard3b protein_coding retained_intron MGP_NODShiLtJ_T0019975.1 MGP_NODShiLtJ_G0015947.1 mouse_genomes_project 1 69069673 70180906 + MGP_NODShiLtJ_P0019975 Pard3b protein_coding protein_coding MGP_NODShiLtJ_T0019976.1 MGP_NODShiLtJ_G0015947.1 mouse_genomes_project 1 69069673 70185241 + MGP_NODShiLtJ_P0019976 Pard3b protein_coding protein_coding MGP_NODShiLtJ_T0000751.1 MGP_NODShiLtJ_G0000684.1 mouse_genomes_project 1 208934438 208936663 - TEC TEC MGP_NODShiLtJ_T0019094.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607300 39618766 + MGP_NODShiLtJ_P0019094 Arid5a protein_coding protein_coding MGP_NODShiLtJ_T0019095.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607321 39617851 + Arid5a protein_coding retained_intron MGP_NODShiLtJ_T0019096.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607321 39619450 + Arid5a protein_coding retained_intron MGP_NODShiLtJ_T0019097.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607321 39618777 + Arid5a protein_coding processed_transcript MGP_NODShiLtJ_T0019098.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607321 39623592 + MGP_NODShiLtJ_P0019098 Arid5a protein_coding protein_coding MGP_NODShiLtJ_T0019099.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607321 39620091 + MGP_NODShiLtJ_P0019099 Arid5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019100.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607321 39617005 + MGP_NODShiLtJ_P0019100 Arid5a protein_coding protein_coding MGP_NODShiLtJ_T0019101.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607321 39620634 + MGP_NODShiLtJ_P0019101 Arid5a protein_coding protein_coding MGP_NODShiLtJ_T0019102.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607321 39620089 + MGP_NODShiLtJ_P0019102 Arid5a protein_coding protein_coding MGP_NODShiLtJ_T0019103.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607325 39612334 + Arid5a protein_coding retained_intron MGP_NODShiLtJ_T0019104.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607346 39616141 + Arid5a protein_coding retained_intron MGP_NODShiLtJ_T0019105.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39607400 39622546 + MGP_NODShiLtJ_P0019105 Arid5a protein_coding protein_coding MGP_NODShiLtJ_T0019106.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39615554 39617699 + Arid5a protein_coding retained_intron MGP_NODShiLtJ_T0019107.1 MGP_NODShiLtJ_G0015786.1 mouse_genomes_project 1 39616589 39617695 + Arid5a protein_coding retained_intron MGP_NODShiLtJ_T0012092.1 MGP_NODShiLtJ_G0010200.1 mouse_genomes_project 1 137475476 137475706 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022297.1 MGP_NODShiLtJ_G0016435.1 mouse_genomes_project 1 164970805 164997621 - MGP_NODShiLtJ_P0022297 Trove2 protein_coding protein_coding MGP_NODShiLtJ_T0022298.1 MGP_NODShiLtJ_G0016435.1 mouse_genomes_project 1 164976654 164997475 - Trove2 protein_coding retained_intron MGP_NODShiLtJ_T0000651.1 MGP_NODShiLtJ_G0000585.1 mouse_genomes_project 1 161910618 161913527 - TEC TEC MGP_NODShiLtJ_T0002737.1 MGP_NODShiLtJ_G0002599.1 mouse_genomes_project 1 41706753 41716906 + Gm16150 antisense antisense MGP_NODShiLtJ_T0002738.1 MGP_NODShiLtJ_G0002599.1 mouse_genomes_project 1 41711004 41717969 + Gm16150 antisense antisense MGP_NODShiLtJ_T0012239.1 MGP_NODShiLtJ_G0010347.1 mouse_genomes_project 1 214229715 214231636 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019624.1 MGP_NODShiLtJ_G0015886.1 mouse_genomes_project 1 59651687 59659863 - MGP_NODShiLtJ_P0019624 Asnsd1 protein_coding protein_coding MGP_NODShiLtJ_T0019625.1 MGP_NODShiLtJ_G0015886.1 mouse_genomes_project 1 59651715 59659863 - MGP_NODShiLtJ_P0019625 Asnsd1 protein_coding protein_coding MGP_NODShiLtJ_T0019626.1 MGP_NODShiLtJ_G0015886.1 mouse_genomes_project 1 59654900 59659863 - MGP_NODShiLtJ_P0019626 Asnsd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019627.1 MGP_NODShiLtJ_G0015886.1 mouse_genomes_project 1 59655307 59658386 - MGP_NODShiLtJ_P0019627 Asnsd1 protein_coding protein_coding MGP_NODShiLtJ_T0019628.1 MGP_NODShiLtJ_G0015886.1 mouse_genomes_project 1 59657386 59659681 - Asnsd1 protein_coding retained_intron MGP_NODShiLtJ_T0020051.1 MGP_NODShiLtJ_G0015962.1 mouse_genomes_project 1 72345260 72356784 - MGP_NODShiLtJ_P0020051 Mettl21a protein_coding protein_coding MGP_NODShiLtJ_T0020052.1 MGP_NODShiLtJ_G0015962.1 mouse_genomes_project 1 72345267 72356710 - MGP_NODShiLtJ_P0020052 Mettl21a protein_coding protein_coding MGP_NODShiLtJ_T0020053.1 MGP_NODShiLtJ_G0015962.1 mouse_genomes_project 1 72346743 72355173 - Mettl21a protein_coding processed_transcript MGP_NODShiLtJ_T0020054.1 MGP_NODShiLtJ_G0015962.1 mouse_genomes_project 1 72353743 72356726 - Mettl21a protein_coding processed_transcript MGP_NODShiLtJ_T0000376.1 MGP_NODShiLtJ_G0000314.1 mouse_genomes_project 1 12186296 12190869 - TEC TEC MGP_NODShiLtJ_T0021014.1 MGP_NODShiLtJ_G0016148.1 mouse_genomes_project 1 99169216 99344396 + MGP_NODShiLtJ_P0021014 Ugt1a5 protein_coding protein_coding MGP_NODShiLtJ_T0023804.1 MGP_NODShiLtJ_G0016767.1 mouse_genomes_project 1 209767072 209862512 + MGP_NODShiLtJ_P0023804 Susd4 protein_coding protein_coding MGP_NODShiLtJ_T0023805.1 MGP_NODShiLtJ_G0016767.1 mouse_genomes_project 1 209767224 209904586 + MGP_NODShiLtJ_P0023805 Susd4 protein_coding protein_coding MGP_NODShiLtJ_T0023806.1 MGP_NODShiLtJ_G0016767.1 mouse_genomes_project 1 209767607 209841735 + MGP_NODShiLtJ_P0023806 Susd4 protein_coding protein_coding MGP_NODShiLtJ_T0023807.1 MGP_NODShiLtJ_G0016767.1 mouse_genomes_project 1 209767768 209841761 + MGP_NODShiLtJ_P0023807 Susd4 protein_coding protein_coding MGP_NODShiLtJ_T0023808.1 MGP_NODShiLtJ_G0016767.1 mouse_genomes_project 1 209768107 209905945 + MGP_NODShiLtJ_P0023808 Susd4 protein_coding protein_coding MGP_NODShiLtJ_T0005687.1 MGP_NODShiLtJ_G0004770.1 mouse_genomes_project 1 68671040 68677259 - Gm28083 lincRNA lincRNA MGP_NODShiLtJ_T0009412.1 MGP_NODShiLtJ_G0007545.1 mouse_genomes_project 1 84055240 84055317 - Gm25035 miRNA miRNA MGP_NODShiLtJ_T0019324.1 MGP_NODShiLtJ_G0015827.1 mouse_genomes_project 1 43218166 43281891 - MGP_NODShiLtJ_P0019324 Rfx8 protein_coding protein_coding MGP_NODShiLtJ_T0019325.1 MGP_NODShiLtJ_G0015827.1 mouse_genomes_project 1 43237864 43248771 - Rfx8 protein_coding processed_transcript MGP_NODShiLtJ_T0021700.1 MGP_NODShiLtJ_G0016302.1 mouse_genomes_project 1 147001826 147060221 - MGP_NODShiLtJ_P0021700 Dars protein_coding protein_coding MGP_NODShiLtJ_T0021701.1 MGP_NODShiLtJ_G0016302.1 mouse_genomes_project 1 147014867 147019417 - Dars protein_coding retained_intron MGP_NODShiLtJ_T0021702.1 MGP_NODShiLtJ_G0016302.1 mouse_genomes_project 1 147054506 147060230 - MGP_NODShiLtJ_P0021702 Dars protein_coding protein_coding MGP_NODShiLtJ_T0005997.1 MGP_NODShiLtJ_G0005016.1 mouse_genomes_project 1 220757846 220759275 - Gm31406 lincRNA lincRNA MGP_NODShiLtJ_T0011949.1 MGP_NODShiLtJ_G0010057.1 mouse_genomes_project 1 69459342 69459620 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000670.1 MGP_NODShiLtJ_G0000604.1 mouse_genomes_project 1 179692966 179693201 + TEC TEC MGP_NODShiLtJ_T0018848.1 MGP_NODShiLtJ_G0015730.1 mouse_genomes_project 1 17004991 17049359 + MGP_NODShiLtJ_P0018848 Crispld1 protein_coding protein_coding MGP_NODShiLtJ_T0018849.1 MGP_NODShiLtJ_G0015730.1 mouse_genomes_project 1 17005005 17026853 + MGP_NODShiLtJ_P0018849 Crispld1 protein_coding protein_coding MGP_NODShiLtJ_T0018850.1 MGP_NODShiLtJ_G0015730.1 mouse_genomes_project 1 17005034 17051596 + MGP_NODShiLtJ_P0018850 Crispld1 protein_coding protein_coding MGP_NODShiLtJ_T0097869.1 MGP_NODShiLtJ_G0036281.1 mouse_genomes_project 1 158689938 158690054 - n-R5s217 rRNA rRNA MGP_NODShiLtJ_T0022064.1 MGP_NODShiLtJ_G0016386.1 mouse_genomes_project 1 154363312 154379753 + MGP_NODShiLtJ_P0022064 Ube2t protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022065.1 MGP_NODShiLtJ_G0016386.1 mouse_genomes_project 1 154363407 154379747 + MGP_NODShiLtJ_P0022065 Ube2t protein_coding protein_coding MGP_NODShiLtJ_T0022066.1 MGP_NODShiLtJ_G0016386.1 mouse_genomes_project 1 154363433 154366864 + Ube2t protein_coding retained_intron MGP_NODShiLtJ_T0022067.1 MGP_NODShiLtJ_G0016386.1 mouse_genomes_project 1 154376885 154379744 + MGP_NODShiLtJ_P0022067 Ube2t protein_coding protein_coding MGP_NODShiLtJ_T0022068.1 MGP_NODShiLtJ_G0016386.1 mouse_genomes_project 1 154377538 154378440 + Ube2t protein_coding retained_intron MGP_NODShiLtJ_T0019639.1 MGP_NODShiLtJ_G0015889.1 mouse_genomes_project 1 60865179 60893232 + Ccdc150 protein_coding retained_intron MGP_NODShiLtJ_T0019640.1 MGP_NODShiLtJ_G0015889.1 mouse_genomes_project 1 60865179 60990322 + MGP_NODShiLtJ_P0019640 Ccdc150 protein_coding protein_coding MGP_NODShiLtJ_T0019641.1 MGP_NODShiLtJ_G0015889.1 mouse_genomes_project 1 60865218 60990065 + MGP_NODShiLtJ_P0019641 Ccdc150 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019642.1 MGP_NODShiLtJ_G0015889.1 mouse_genomes_project 1 60948881 60990203 + Ccdc150 protein_coding processed_transcript MGP_NODShiLtJ_T0019643.1 MGP_NODShiLtJ_G0015889.1 mouse_genomes_project 1 60976247 60990198 + Ccdc150 protein_coding retained_intron MGP_NODShiLtJ_T0012031.1 MGP_NODShiLtJ_G0010139.1 mouse_genomes_project 1 109600020 109600984 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098531.1 MGP_NODShiLtJ_G0036925.1 mouse_genomes_project 1 74474650 74474801 + Gm25411 snRNA snRNA MGP_NODShiLtJ_T0097857.1 MGP_NODShiLtJ_G0036269.1 mouse_genomes_project 1 40357054 40357173 + n-R5s210 rRNA rRNA MGP_NODShiLtJ_T0019192.1 MGP_NODShiLtJ_G0015801.1 mouse_genomes_project 1 40591755 40646998 + MGP_NODShiLtJ_P0019192 Cnga3 protein_coding protein_coding MGP_NODShiLtJ_T0019193.1 MGP_NODShiLtJ_G0015801.1 mouse_genomes_project 1 40600427 40672319 + MGP_NODShiLtJ_P0019193 Cnga3 protein_coding protein_coding MGP_NODShiLtJ_T0019194.1 MGP_NODShiLtJ_G0015801.1 mouse_genomes_project 1 40600427 40672319 + MGP_NODShiLtJ_P0019194 Cnga3 protein_coding protein_coding MGP_NODShiLtJ_T0019195.1 MGP_NODShiLtJ_G0015801.1 mouse_genomes_project 1 40601248 40673548 + MGP_NODShiLtJ_P0019195 Cnga3 protein_coding protein_coding MGP_NODShiLtJ_T0012072.1 MGP_NODShiLtJ_G0010180.1 mouse_genomes_project 1 128589810 128593840 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002926.1 MGP_NODShiLtJ_G0002743.1 mouse_genomes_project 1 212020023 212039261 + Gm38251 antisense antisense MGP_NODShiLtJ_T0000403.1 MGP_NODShiLtJ_G0000340.1 mouse_genomes_project 1 25945322 25948577 - TEC TEC MGP_NODShiLtJ_T0022192.1 MGP_NODShiLtJ_G0016412.1 mouse_genomes_project 1 155771330 155852204 - MGP_NODShiLtJ_P0022192 Camsap2 protein_coding protein_coding MGP_NODShiLtJ_T0022193.1 MGP_NODShiLtJ_G0016412.1 mouse_genomes_project 1 155771459 155785073 - MGP_NODShiLtJ_P0022193 Camsap2 protein_coding protein_coding MGP_NODShiLtJ_T0022194.1 MGP_NODShiLtJ_G0016412.1 mouse_genomes_project 1 155772367 155851798 - MGP_NODShiLtJ_P0022194 Camsap2 protein_coding protein_coding MGP_NODShiLtJ_T0022195.1 MGP_NODShiLtJ_G0016412.1 mouse_genomes_project 1 155773937 155851798 - MGP_NODShiLtJ_P0022195 Camsap2 protein_coding protein_coding MGP_NODShiLtJ_T0022196.1 MGP_NODShiLtJ_G0016412.1 mouse_genomes_project 1 155798873 155801766 - Camsap2 protein_coding processed_transcript MGP_NODShiLtJ_T0022197.1 MGP_NODShiLtJ_G0016412.1 mouse_genomes_project 1 155839613 155852190 - Camsap2 protein_coding processed_transcript MGP_NODShiLtJ_T0012008.1 MGP_NODShiLtJ_G0010116.1 mouse_genomes_project 1 94659661 94660207 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021456.1 MGP_NODShiLtJ_G0016255.1 mouse_genomes_project 1 122267495 122282336 + MGP_NODShiLtJ_P0021456 protein_coding protein_coding MGP_NODShiLtJ_T0101461.1 MGP_NODShiLtJ_G0039631.1 mouse_genomes_project 1 17407207 17420353 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098240.1 MGP_NODShiLtJ_G0036651.1 mouse_genomes_project 1 176495268 176497107 - Gm28791 sense_intronic sense_intronic MGP_NODShiLtJ_T0099734.1 MGP_NODShiLtJ_G0038128.1 mouse_genomes_project 1 9628197 9628325 - Gm24173 snoRNA snoRNA MGP_NODShiLtJ_T0011848.1 MGP_NODShiLtJ_G0009956.1 mouse_genomes_project 1 37773871 37774517 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000405.1 MGP_NODShiLtJ_G0000342.1 mouse_genomes_project 1 26297213 26308961 - TEC TEC MGP_NODShiLtJ_T0002749.1 MGP_NODShiLtJ_G0002608.1 mouse_genomes_project 1 47026944 47027814 + Gm28782 antisense antisense MGP_NODShiLtJ_T0000362.1 MGP_NODShiLtJ_G0000300.1 mouse_genomes_project 1 7554433 7557682 + TEC TEC MGP_NODShiLtJ_T0000603.1 MGP_NODShiLtJ_G0000539.1 mouse_genomes_project 1 148100677 148101636 + TEC TEC MGP_NODShiLtJ_T0023273.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196888030 196898230 + MGP_NODShiLtJ_P0023273 Usf1 protein_coding protein_coding MGP_NODShiLtJ_T0023274.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196888030 196897185 + MGP_NODShiLtJ_P0023274 Usf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023275.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196888030 196894397 + MGP_NODShiLtJ_P0023275 Usf1 protein_coding protein_coding MGP_NODShiLtJ_T0023276.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196888043 196893157 + Usf1 protein_coding processed_transcript MGP_NODShiLtJ_T0023277.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196888051 196895534 + Usf1 protein_coding retained_intron MGP_NODShiLtJ_T0023278.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196888091 196893033 + Usf1 protein_coding retained_intron MGP_NODShiLtJ_T0023279.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196888101 196897846 + MGP_NODShiLtJ_P0023279 Usf1 protein_coding protein_coding MGP_NODShiLtJ_T0023280.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196888398 196897832 + MGP_NODShiLtJ_P0023280 Usf1 protein_coding protein_coding MGP_NODShiLtJ_T0023281.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196895507 196896994 + Usf1 protein_coding retained_intron MGP_NODShiLtJ_T0023282.1 MGP_NODShiLtJ_G0016630.1 mouse_genomes_project 1 196895637 196897495 + Usf1 protein_coding retained_intron MGP_NODShiLtJ_T0005726.1 MGP_NODShiLtJ_G0004799.1 mouse_genomes_project 1 82884961 82888499 - C530043A13Rik lincRNA lincRNA MGP_NODShiLtJ_T0005727.1 MGP_NODShiLtJ_G0004799.1 mouse_genomes_project 1 82884963 82888332 - C530043A13Rik lincRNA lincRNA MGP_NODShiLtJ_T0005728.1 MGP_NODShiLtJ_G0004799.1 mouse_genomes_project 1 82886079 82892866 - C530043A13Rik lincRNA lincRNA MGP_NODShiLtJ_T0000604.1 MGP_NODShiLtJ_G0000540.1 mouse_genomes_project 1 148472670 148475365 + TEC TEC MGP_NODShiLtJ_T0011780.1 MGP_NODShiLtJ_G0009888.1 mouse_genomes_project 1 12658828 12660443 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020400.1 MGP_NODShiLtJ_G0016033.1 mouse_genomes_project 1 84392195 84425534 - MGP_NODShiLtJ_P0020400 Ccdc108 protein_coding protein_coding MGP_NODShiLtJ_T0020401.1 MGP_NODShiLtJ_G0016033.1 mouse_genomes_project 1 84412240 84425529 - Ccdc108 protein_coding retained_intron MGP_NODShiLtJ_T0020402.1 MGP_NODShiLtJ_G0016033.1 mouse_genomes_project 1 84413329 84425527 - Ccdc108 protein_coding retained_intron MGP_NODShiLtJ_T0012181.1 MGP_NODShiLtJ_G0010289.1 mouse_genomes_project 1 181728733 181728906 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005808.1 MGP_NODShiLtJ_G0004867.1 mouse_genomes_project 1 129998775 130004826 + lincRNA lincRNA MGP_NODShiLtJ_T0020792.1 MGP_NODShiLtJ_G0016103.1 mouse_genomes_project 1 96257898 96335910 + MGP_NODShiLtJ_P0020792 Sp100 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020793.1 MGP_NODShiLtJ_G0016103.1 mouse_genomes_project 1 96273669 96322322 + MGP_NODShiLtJ_P0020793 Sp100 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020794.1 MGP_NODShiLtJ_G0016103.1 mouse_genomes_project 1 96286721 96335910 + MGP_NODShiLtJ_P0020794 Sp100 protein_coding protein_coding MGP_NODShiLtJ_T0020795.1 MGP_NODShiLtJ_G0016103.1 mouse_genomes_project 1 96296384 96307921 + Sp100 protein_coding processed_transcript MGP_NODShiLtJ_T0020796.1 MGP_NODShiLtJ_G0016103.1 mouse_genomes_project 1 96298270 96304531 + Sp100 protein_coding retained_intron MGP_NODShiLtJ_T0020797.1 MGP_NODShiLtJ_G0016103.1 mouse_genomes_project 1 96319892 96325615 + Sp100 protein_coding retained_intron MGP_NODShiLtJ_T0020798.1 MGP_NODShiLtJ_G0016103.1 mouse_genomes_project 1 96320250 96335338 + MGP_NODShiLtJ_P0020798 Sp100 protein_coding protein_coding MGP_NODShiLtJ_T0020799.1 MGP_NODShiLtJ_G0016103.1 mouse_genomes_project 1 96329375 96333927 + MGP_NODShiLtJ_P0020799 Sp100 protein_coding protein_coding MGP_NODShiLtJ_T0021450.1 MGP_NODShiLtJ_G0016253.1 mouse_genomes_project 1 122112916 122153048 + MGP_NODShiLtJ_P0021450 Serpinb7 protein_coding protein_coding MGP_NODShiLtJ_T0021451.1 MGP_NODShiLtJ_G0016253.1 mouse_genomes_project 1 122138263 122173983 + MGP_NODShiLtJ_P0021451 Serpinb7 protein_coding protein_coding MGP_NODShiLtJ_T0022752.1 MGP_NODShiLtJ_G0016516.1 mouse_genomes_project 1 185551727 185587784 - MGP_NODShiLtJ_P0022752 Zbtb37 protein_coding protein_coding MGP_NODShiLtJ_T0022753.1 MGP_NODShiLtJ_G0016516.1 mouse_genomes_project 1 185557599 185587784 - MGP_NODShiLtJ_P0022753 Zbtb37 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022754.1 MGP_NODShiLtJ_G0016516.1 mouse_genomes_project 1 185557605 185587769 - MGP_NODShiLtJ_P0022754 Zbtb37 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022755.1 MGP_NODShiLtJ_G0016516.1 mouse_genomes_project 1 185566952 185587194 - MGP_NODShiLtJ_P0022755 Zbtb37 protein_coding protein_coding MGP_NODShiLtJ_T0022756.1 MGP_NODShiLtJ_G0016516.1 mouse_genomes_project 1 185568455 185587783 - MGP_NODShiLtJ_P0022756 Zbtb37 protein_coding protein_coding MGP_NODShiLtJ_T0022757.1 MGP_NODShiLtJ_G0016516.1 mouse_genomes_project 1 185568619 185587219 - MGP_NODShiLtJ_P0022757 Zbtb37 protein_coding protein_coding MGP_NODShiLtJ_T0022758.1 MGP_NODShiLtJ_G0016516.1 mouse_genomes_project 1 185585372 185587751 - MGP_NODShiLtJ_P0022758 Zbtb37 protein_coding protein_coding MGP_NODShiLtJ_T0000678.1 MGP_NODShiLtJ_G0000612.1 mouse_genomes_project 1 180809504 180812147 - TEC TEC MGP_NODShiLtJ_T0098233.1 MGP_NODShiLtJ_G0036644.1 mouse_genomes_project 1 150414736 150417138 - Gm29488 sense_intronic sense_intronic MGP_NODShiLtJ_T0011937.1 MGP_NODShiLtJ_G0010045.1 mouse_genomes_project 1 67544602 67544829 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021958.1 MGP_NODShiLtJ_G0016362.1 mouse_genomes_project 1 152881307 152934059 - MGP_NODShiLtJ_P0021958 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021959.1 MGP_NODShiLtJ_G0016362.1 mouse_genomes_project 1 152888915 152934059 - MGP_NODShiLtJ_P0021959 protein_coding protein_coding MGP_NODShiLtJ_T0021575.1 MGP_NODShiLtJ_G0016278.1 mouse_genomes_project 1 137990857 137993448 + MGP_NODShiLtJ_P0021575 C1ql2 protein_coding protein_coding MGP_NODShiLtJ_T0012082.1 MGP_NODShiLtJ_G0010190.1 mouse_genomes_project 1 134999598 135000072 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009396.1 MGP_NODShiLtJ_G0007529.1 mouse_genomes_project 1 49605134 49605275 + miRNA miRNA MGP_NODShiLtJ_T0002755.1 MGP_NODShiLtJ_G0002613.1 mouse_genomes_project 1 57310617 57427866 - 9330175M20Rik antisense antisense MGP_NODShiLtJ_T0019725.1 MGP_NODShiLtJ_G0015906.1 mouse_genomes_project 1 64344363 64357035 + MGP_NODShiLtJ_P0019725 9430016H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0000588.1 MGP_NODShiLtJ_G0000524.1 mouse_genomes_project 1 142044917 142047776 - TEC TEC MGP_NODShiLtJ_T0023539.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203018844 203106393 - MGP_NODShiLtJ_P0023539 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0023540.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203018853 203113964 - MGP_NODShiLtJ_P0023540 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0023541.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203018853 203042714 - MGP_NODShiLtJ_P0023541 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0023542.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203018854 203091571 - MGP_NODShiLtJ_P0023542 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0023543.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203019312 203036263 - Cep170 protein_coding retained_intron MGP_NODShiLtJ_T0023544.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203019350 203043897 - MGP_NODShiLtJ_P0023544 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0023545.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203019552 203091581 - MGP_NODShiLtJ_P0023545 Cep170 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023546.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203021147 203035912 - MGP_NODShiLtJ_P0023546 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0023547.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203021585 203039461 - Cep170 protein_coding processed_transcript MGP_NODShiLtJ_T0023548.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203026480 203029103 - Cep170 protein_coding retained_intron MGP_NODShiLtJ_T0023549.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203063205 203070497 - Cep170 protein_coding retained_intron MGP_NODShiLtJ_T0023550.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203064964 203075726 - MGP_NODShiLtJ_P0023550 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0023551.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203070631 203113964 - MGP_NODShiLtJ_P0023551 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0023552.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203086511 203106399 - Cep170 protein_coding retained_intron MGP_NODShiLtJ_T0023553.1 MGP_NODShiLtJ_G0016714.1 mouse_genomes_project 1 203086588 203106393 - MGP_NODShiLtJ_P0023553 Cep170 protein_coding protein_coding MGP_NODShiLtJ_T0018767.1 MGP_NODShiLtJ_G0015711.1 mouse_genomes_project 1 12485132 12522437 - MGP_NODShiLtJ_P0018767 Lactb2 protein_coding protein_coding MGP_NODShiLtJ_T0018768.1 MGP_NODShiLtJ_G0015711.1 mouse_genomes_project 1 12492052 12500470 - Lactb2 protein_coding retained_intron MGP_NODShiLtJ_T0011895.1 MGP_NODShiLtJ_G0010003.1 mouse_genomes_project 1 54069404 54070335 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022916.1 MGP_NODShiLtJ_G0016549.1 mouse_genomes_project 1 188980120 189017893 + MGP_NODShiLtJ_P0022916 Selp protein_coding protein_coding MGP_NODShiLtJ_T0022917.1 MGP_NODShiLtJ_G0016549.1 mouse_genomes_project 1 189007904 189009378 + Selp protein_coding retained_intron MGP_NODShiLtJ_T0022918.1 MGP_NODShiLtJ_G0016549.1 mouse_genomes_project 1 189008462 189017008 + MGP_NODShiLtJ_P0022918 Selp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022919.1 MGP_NODShiLtJ_G0016549.1 mouse_genomes_project 1 189011287 189017878 + Selp protein_coding retained_intron MGP_NODShiLtJ_T0022920.1 MGP_NODShiLtJ_G0016549.1 mouse_genomes_project 1 189013583 189017021 + Selp protein_coding retained_intron MGP_NODShiLtJ_T0000429.1 MGP_NODShiLtJ_G0000365.1 mouse_genomes_project 1 36986069 36988460 + TEC TEC MGP_NODShiLtJ_T0023124.1 MGP_NODShiLtJ_G0016600.1 mouse_genomes_project 1 195639852 195643162 + MGP_NODShiLtJ_P0023124 1700015E13Rik protein_coding protein_coding MGP_NODShiLtJ_T0009457.1 MGP_NODShiLtJ_G0007590.1 mouse_genomes_project 1 187373908 187373971 - Gm27616 miRNA miRNA MGP_NODShiLtJ_T0022857.1 MGP_NODShiLtJ_G0016534.1 mouse_genomes_project 1 187503938 187526590 - MGP_NODShiLtJ_P0022857 Fmo4 protein_coding protein_coding MGP_NODShiLtJ_T0022858.1 MGP_NODShiLtJ_G0016534.1 mouse_genomes_project 1 187504633 187525467 - MGP_NODShiLtJ_P0022858 Fmo4 protein_coding protein_coding MGP_NODShiLtJ_T0022859.1 MGP_NODShiLtJ_G0016534.1 mouse_genomes_project 1 187516118 187526590 - Fmo4 protein_coding retained_intron MGP_NODShiLtJ_T0022860.1 MGP_NODShiLtJ_G0016534.1 mouse_genomes_project 1 187516875 187521740 - Fmo4 protein_coding retained_intron MGP_NODShiLtJ_T0022861.1 MGP_NODShiLtJ_G0016534.1 mouse_genomes_project 1 187520779 187526844 - MGP_NODShiLtJ_P0022861 Fmo4 protein_coding protein_coding MGP_NODShiLtJ_T0022862.1 MGP_NODShiLtJ_G0016534.1 mouse_genomes_project 1 187521550 187526890 - MGP_NODShiLtJ_P0022862 Fmo4 protein_coding protein_coding MGP_NODShiLtJ_T0000760.1 MGP_NODShiLtJ_G0000692.1 mouse_genomes_project 1 212454792 212457210 + TEC TEC MGP_NODShiLtJ_T0012000.1 MGP_NODShiLtJ_G0010108.1 mouse_genomes_project 1 93108551 93108734 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018671.1 MGP_NODShiLtJ_G0015698.1 mouse_genomes_project 1 8385496 8394911 - MGP_NODShiLtJ_P0018671 Tcf24 protein_coding protein_coding MGP_NODShiLtJ_T0018672.1 MGP_NODShiLtJ_G0015698.1 mouse_genomes_project 1 8385504 8388142 - MGP_NODShiLtJ_P0018672 Tcf24 protein_coding protein_coding MGP_NODShiLtJ_T0022840.1 MGP_NODShiLtJ_G0016532.1 mouse_genomes_project 1 187343086 187352444 - 7420461P10Rik protein_coding processed_transcript MGP_NODShiLtJ_T0022841.1 MGP_NODShiLtJ_G0016532.1 mouse_genomes_project 1 187343086 187353709 - MGP_NODShiLtJ_P0022841 7420461P10Rik protein_coding protein_coding MGP_NODShiLtJ_T0022842.1 MGP_NODShiLtJ_G0016532.1 mouse_genomes_project 1 187343096 187353822 - MGP_NODShiLtJ_P0022842 7420461P10Rik protein_coding protein_coding MGP_NODShiLtJ_T0020300.1 MGP_NODShiLtJ_G0016014.1 mouse_genomes_project 1 83818025 83824978 + MGP_NODShiLtJ_P0020300 Catip protein_coding protein_coding MGP_NODShiLtJ_T0020301.1 MGP_NODShiLtJ_G0016014.1 mouse_genomes_project 1 83818283 83823455 + MGP_NODShiLtJ_P0020301 Catip protein_coding protein_coding MGP_NODShiLtJ_T0020302.1 MGP_NODShiLtJ_G0016014.1 mouse_genomes_project 1 83818359 83824807 + MGP_NODShiLtJ_P0020302 Catip protein_coding protein_coding MGP_NODShiLtJ_T0020303.1 MGP_NODShiLtJ_G0016014.1 mouse_genomes_project 1 83820468 83822397 + Catip protein_coding retained_intron MGP_NODShiLtJ_T0022961.1 MGP_NODShiLtJ_G0016561.1 mouse_genomes_project 1 190263825 190309260 + MGP_NODShiLtJ_P0022961 Gpr161 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022962.1 MGP_NODShiLtJ_G0016561.1 mouse_genomes_project 1 190280283 190309356 + MGP_NODShiLtJ_P0022962 Gpr161 protein_coding protein_coding MGP_NODShiLtJ_T0011787.1 MGP_NODShiLtJ_G0009895.1 mouse_genomes_project 1 16445847 16446226 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011823.1 MGP_NODShiLtJ_G0009931.1 mouse_genomes_project 1 30762371 30762678 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012156.1 MGP_NODShiLtJ_G0010264.1 mouse_genomes_project 1 172059933 172061970 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011974.1 MGP_NODShiLtJ_G0010082.1 mouse_genomes_project 1 80203466 80203845 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000452.1 MGP_NODShiLtJ_G0000388.1 mouse_genomes_project 1 47577787 47579079 + TEC TEC MGP_NODShiLtJ_T0023079.1 MGP_NODShiLtJ_G0016586.1 mouse_genomes_project 1 192818359 192975511 + MGP_NODShiLtJ_P0023079 Lmx1a protein_coding protein_coding MGP_NODShiLtJ_T0023080.1 MGP_NODShiLtJ_G0016586.1 mouse_genomes_project 1 192818679 192975511 + MGP_NODShiLtJ_P0023080 Lmx1a protein_coding protein_coding MGP_NODShiLtJ_T0002885.1 MGP_NODShiLtJ_G0002711.1 mouse_genomes_project 1 186875660 186884307 + Dnm3os antisense antisense MGP_NODShiLtJ_T0002886.1 MGP_NODShiLtJ_G0002711.1 mouse_genomes_project 1 186875660 186884305 + Dnm3os antisense antisense MGP_NODShiLtJ_T0002887.1 MGP_NODShiLtJ_G0002711.1 mouse_genomes_project 1 186875701 186879847 + Dnm3os antisense antisense MGP_NODShiLtJ_T0002849.1 MGP_NODShiLtJ_G0002681.1 mouse_genomes_project 1 154529181 154533384 + Gm10535 antisense antisense MGP_NODShiLtJ_T0101491.1 MGP_NODShiLtJ_G0039661.1 mouse_genomes_project 1 116264597 116364089 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000413.1 MGP_NODShiLtJ_G0000350.1 mouse_genomes_project 1 26491288 26491618 - TEC TEC MGP_NODShiLtJ_T0012104.1 MGP_NODShiLtJ_G0010212.1 mouse_genomes_project 1 141323195 141325828 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018640.1 MGP_NODShiLtJ_G0015691.1 mouse_genomes_project 1 7899601 7903945 + MGP_NODShiLtJ_P0018640 Rrs1 protein_coding protein_coding MGP_NODShiLtJ_T0000744.1 MGP_NODShiLtJ_G0000677.1 mouse_genomes_project 1 207162252 207169621 + TEC TEC MGP_NODShiLtJ_T0000544.1 MGP_NODShiLtJ_G0000480.1 mouse_genomes_project 1 97853514 97856442 + TEC TEC MGP_NODShiLtJ_T0099789.1 MGP_NODShiLtJ_G0038183.1 mouse_genomes_project 1 129071311 129071446 + Gm22331 snoRNA snoRNA MGP_NODShiLtJ_T0018893.1 MGP_NODShiLtJ_G0015745.1 mouse_genomes_project 1 21323033 21326300 + MGP_NODShiLtJ_P0018893 protein_coding protein_coding MGP_NODShiLtJ_T0020653.1 MGP_NODShiLtJ_G0016072.1 mouse_genomes_project 1 89568767 89627441 - MGP_NODShiLtJ_P0020653 Wdfy1 protein_coding protein_coding MGP_NODShiLtJ_T0020654.1 MGP_NODShiLtJ_G0016072.1 mouse_genomes_project 1 89571810 89627410 - MGP_NODShiLtJ_P0020654 Wdfy1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020655.1 MGP_NODShiLtJ_G0016072.1 mouse_genomes_project 1 89585391 89641399 - MGP_NODShiLtJ_P0020655 Wdfy1 protein_coding protein_coding MGP_NODShiLtJ_T0020656.1 MGP_NODShiLtJ_G0016072.1 mouse_genomes_project 1 89586902 89627441 - MGP_NODShiLtJ_P0020656 Wdfy1 protein_coding protein_coding MGP_NODShiLtJ_T0020657.1 MGP_NODShiLtJ_G0016072.1 mouse_genomes_project 1 89586915 89627441 - MGP_NODShiLtJ_P0020657 Wdfy1 protein_coding protein_coding MGP_NODShiLtJ_T0020658.1 MGP_NODShiLtJ_G0016072.1 mouse_genomes_project 1 89587104 89590603 - Wdfy1 protein_coding processed_transcript MGP_NODShiLtJ_T0020659.1 MGP_NODShiLtJ_G0016072.1 mouse_genomes_project 1 89595002 89627393 - Wdfy1 protein_coding retained_intron MGP_NODShiLtJ_T0020660.1 MGP_NODShiLtJ_G0016072.1 mouse_genomes_project 1 89595235 89627719 - MGP_NODShiLtJ_P0020660 Wdfy1 protein_coding protein_coding MGP_NODShiLtJ_T0011803.1 MGP_NODShiLtJ_G0009911.1 mouse_genomes_project 1 21515824 21517835 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005596.1 MGP_NODShiLtJ_G0004704.1 mouse_genomes_project 1 16338439 16343140 + Gm28784 lincRNA lincRNA MGP_NODShiLtJ_T0099742.1 MGP_NODShiLtJ_G0038136.1 mouse_genomes_project 1 20724135 20724267 - Gm24723 snoRNA snoRNA MGP_NODShiLtJ_T0021972.1 MGP_NODShiLtJ_G0016365.1 mouse_genomes_project 1 152979125 153087730 - MGP_NODShiLtJ_P0021972 Atp2b4 protein_coding protein_coding MGP_NODShiLtJ_T0021973.1 MGP_NODShiLtJ_G0016365.1 mouse_genomes_project 1 152983765 153039595 - MGP_NODShiLtJ_P0021973 Atp2b4 protein_coding protein_coding MGP_NODShiLtJ_T0021974.1 MGP_NODShiLtJ_G0016365.1 mouse_genomes_project 1 152983765 153039595 - MGP_NODShiLtJ_P0021974 Atp2b4 protein_coding protein_coding MGP_NODShiLtJ_T0021975.1 MGP_NODShiLtJ_G0016365.1 mouse_genomes_project 1 152987389 153039529 - MGP_NODShiLtJ_P0021975 Atp2b4 protein_coding protein_coding MGP_NODShiLtJ_T0021976.1 MGP_NODShiLtJ_G0016365.1 mouse_genomes_project 1 152997433 153039129 - MGP_NODShiLtJ_P0021976 Atp2b4 protein_coding protein_coding MGP_NODShiLtJ_T0021977.1 MGP_NODShiLtJ_G0016365.1 mouse_genomes_project 1 152999775 153001380 - Atp2b4 protein_coding retained_intron MGP_NODShiLtJ_T0021978.1 MGP_NODShiLtJ_G0016365.1 mouse_genomes_project 1 153039547 153087725 - Atp2b4 protein_coding processed_transcript MGP_NODShiLtJ_T0019782.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65425240 65442096 - MGP_NODShiLtJ_P0019782 Ppil3 protein_coding protein_coding MGP_NODShiLtJ_T0019783.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65425240 65442091 - MGP_NODShiLtJ_P0019783 Ppil3 protein_coding protein_coding MGP_NODShiLtJ_T0019784.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65425243 65442148 - MGP_NODShiLtJ_P0019784 Ppil3 protein_coding protein_coding MGP_NODShiLtJ_T0019785.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65425264 65426429 - Ppil3 protein_coding processed_transcript MGP_NODShiLtJ_T0019786.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65428029 65442031 - MGP_NODShiLtJ_P0019786 Ppil3 protein_coding protein_coding MGP_NODShiLtJ_T0019787.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65428657 65442101 - MGP_NODShiLtJ_P0019787 Ppil3 protein_coding protein_coding MGP_NODShiLtJ_T0019788.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65428661 65442144 - MGP_NODShiLtJ_P0019788 Ppil3 protein_coding protein_coding MGP_NODShiLtJ_T0019789.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65433756 65441838 - Ppil3 protein_coding retained_intron MGP_NODShiLtJ_T0019790.1 MGP_NODShiLtJ_G0015916.1 mouse_genomes_project 1 65434410 65436549 - Ppil3 protein_coding retained_intron MGP_NODShiLtJ_T0005679.1 MGP_NODShiLtJ_G0004764.1 mouse_genomes_project 1 64294222 64313299 - 4930558J18Rik lincRNA lincRNA MGP_NODShiLtJ_T0019356.1 MGP_NODShiLtJ_G0015833.1 mouse_genomes_project 1 44054110 44072966 + MGP_NODShiLtJ_P0019356 Il1rl1 protein_coding protein_coding MGP_NODShiLtJ_T0019357.1 MGP_NODShiLtJ_G0015833.1 mouse_genomes_project 1 44062768 44067650 + MGP_NODShiLtJ_P0019357 Il1rl1 protein_coding protein_coding MGP_NODShiLtJ_T0019358.1 MGP_NODShiLtJ_G0015833.1 mouse_genomes_project 1 44065869 44090718 + MGP_NODShiLtJ_P0019358 Il1rl1 protein_coding protein_coding MGP_NODShiLtJ_T0019359.1 MGP_NODShiLtJ_G0015833.1 mouse_genomes_project 1 44066018 44074391 + MGP_NODShiLtJ_P0019359 Il1rl1 protein_coding protein_coding MGP_NODShiLtJ_T0019360.1 MGP_NODShiLtJ_G0015833.1 mouse_genomes_project 1 44066870 44090700 + MGP_NODShiLtJ_P0019360 Il1rl1 protein_coding protein_coding MGP_NODShiLtJ_T0023289.1 MGP_NODShiLtJ_G0016633.1 mouse_genomes_project 1 196980081 196981353 + MGP_NODShiLtJ_P0023289 Alyref2 protein_coding protein_coding MGP_NODShiLtJ_T0011766.1 MGP_NODShiLtJ_G0009874.1 mouse_genomes_project 1 7849431 7851616 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011981.1 MGP_NODShiLtJ_G0010089.1 mouse_genomes_project 1 82664627 82664961 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020290.1 MGP_NODShiLtJ_G0016013.1 mouse_genomes_project 1 83728242 83745514 - MGP_NODShiLtJ_P0020290 Tmbim1 protein_coding protein_coding MGP_NODShiLtJ_T0020291.1 MGP_NODShiLtJ_G0016013.1 mouse_genomes_project 1 83728246 83745460 - Tmbim1 protein_coding retained_intron MGP_NODShiLtJ_T0020292.1 MGP_NODShiLtJ_G0016013.1 mouse_genomes_project 1 83728246 83735646 - Tmbim1 protein_coding retained_intron MGP_NODShiLtJ_T0020293.1 MGP_NODShiLtJ_G0016013.1 mouse_genomes_project 1 83728248 83745470 - MGP_NODShiLtJ_P0020293 Tmbim1 protein_coding protein_coding MGP_NODShiLtJ_T0020294.1 MGP_NODShiLtJ_G0016013.1 mouse_genomes_project 1 83729295 83731186 - MGP_NODShiLtJ_P0020294 Tmbim1 protein_coding protein_coding MGP_NODShiLtJ_T0020295.1 MGP_NODShiLtJ_G0016013.1 mouse_genomes_project 1 83733528 83745324 - Tmbim1 protein_coding processed_transcript MGP_NODShiLtJ_T0020296.1 MGP_NODShiLtJ_G0016013.1 mouse_genomes_project 1 83733876 83746735 - MGP_NODShiLtJ_P0020296 Tmbim1 protein_coding protein_coding MGP_NODShiLtJ_T0020297.1 MGP_NODShiLtJ_G0016013.1 mouse_genomes_project 1 83733893 83745229 - MGP_NODShiLtJ_P0020297 Tmbim1 protein_coding protein_coding MGP_NODShiLtJ_T0099737.1 MGP_NODShiLtJ_G0038131.1 mouse_genomes_project 1 14750728 14750840 - Gm25227 snoRNA snoRNA MGP_NODShiLtJ_T0002762.1 MGP_NODShiLtJ_G0002619.1 mouse_genomes_project 1 66144179 66188579 + Gm29018 antisense antisense MGP_NODShiLtJ_T0002763.1 MGP_NODShiLtJ_G0002619.1 mouse_genomes_project 1 66163463 66165315 + Gm29018 antisense antisense MGP_NODShiLtJ_T0011980.1 MGP_NODShiLtJ_G0010088.1 mouse_genomes_project 1 81749813 81750342 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022807.1 MGP_NODShiLtJ_G0016526.1 mouse_genomes_project 1 186587329 186626201 - MGP_NODShiLtJ_P0022807 4930558K02Rik protein_coding protein_coding MGP_NODShiLtJ_T0022808.1 MGP_NODShiLtJ_G0016526.1 mouse_genomes_project 1 186587334 186615344 - 4930558K02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0000626.1 MGP_NODShiLtJ_G0000561.1 mouse_genomes_project 1 154979728 154981974 - TEC TEC MGP_NODShiLtJ_T0023186.1 MGP_NODShiLtJ_G0016615.1 mouse_genomes_project 1 196678112 196684618 - MGP_NODShiLtJ_P0023186 Tomm40l protein_coding protein_coding MGP_NODShiLtJ_T0023187.1 MGP_NODShiLtJ_G0016615.1 mouse_genomes_project 1 196679904 196684552 - MGP_NODShiLtJ_P0023187 Tomm40l protein_coding protein_coding MGP_NODShiLtJ_T0023188.1 MGP_NODShiLtJ_G0016615.1 mouse_genomes_project 1 196679904 196684288 - MGP_NODShiLtJ_P0023188 Tomm40l protein_coding protein_coding MGP_NODShiLtJ_T0023189.1 MGP_NODShiLtJ_G0016615.1 mouse_genomes_project 1 196680465 196684555 - MGP_NODShiLtJ_P0023189 Tomm40l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023190.1 MGP_NODShiLtJ_G0016615.1 mouse_genomes_project 1 196682930 196684564 - MGP_NODShiLtJ_P0023190 Tomm40l protein_coding protein_coding MGP_NODShiLtJ_T0023191.1 MGP_NODShiLtJ_G0016615.1 mouse_genomes_project 1 196683001 196684548 - MGP_NODShiLtJ_P0023191 Tomm40l protein_coding protein_coding MGP_NODShiLtJ_T0023192.1 MGP_NODShiLtJ_G0016615.1 mouse_genomes_project 1 196683190 196684536 - Tomm40l protein_coding processed_transcript MGP_NODShiLtJ_T0023193.1 MGP_NODShiLtJ_G0016615.1 mouse_genomes_project 1 196683283 196684600 - Tomm40l protein_coding retained_intron MGP_NODShiLtJ_T0000475.1 MGP_NODShiLtJ_G0000411.1 mouse_genomes_project 1 67913701 67915130 - TEC TEC MGP_NODShiLtJ_T0012038.1 MGP_NODShiLtJ_G0010146.1 mouse_genomes_project 1 114075552 114076219 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012223.1 MGP_NODShiLtJ_G0010331.1 mouse_genomes_project 1 204170211 204170806 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002716.1 MGP_NODShiLtJ_G0002582.1 mouse_genomes_project 1 16938750 17005231 - Gm16070 antisense antisense MGP_NODShiLtJ_T0002717.1 MGP_NODShiLtJ_G0002582.1 mouse_genomes_project 1 16966515 17005593 - Gm16070 antisense antisense MGP_NODShiLtJ_T0002718.1 MGP_NODShiLtJ_G0002582.1 mouse_genomes_project 1 17002930 17005202 - Gm16070 antisense antisense MGP_NODShiLtJ_T0023120.1 MGP_NODShiLtJ_G0016596.1 mouse_genomes_project 1 195551416 195572362 + MGP_NODShiLtJ_P0023120 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098232.1 MGP_NODShiLtJ_G0036643.1 mouse_genomes_project 1 120062559 120063012 - Gm28404 sense_intronic sense_intronic MGP_NODShiLtJ_T0098536.1 MGP_NODShiLtJ_G0036930.1 mouse_genomes_project 1 81491039 81491230 + Gm25360 snRNA snRNA MGP_NODShiLtJ_T0023078.1 MGP_NODShiLtJ_G0016585.1 mouse_genomes_project 1 192721859 192765591 + MGP_NODShiLtJ_P0023078 Rxrg protein_coding protein_coding MGP_NODShiLtJ_T0021674.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146702694 146798442 + R3hdm1 protein_coding retained_intron MGP_NODShiLtJ_T0021675.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146702714 146794444 + MGP_NODShiLtJ_P0021675 R3hdm1 protein_coding protein_coding MGP_NODShiLtJ_T0021676.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146702717 146860854 + MGP_NODShiLtJ_P0021676 R3hdm1 protein_coding protein_coding MGP_NODShiLtJ_T0021677.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146702717 146804162 + MGP_NODShiLtJ_P0021677 R3hdm1 protein_coding protein_coding MGP_NODShiLtJ_T0021678.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146702724 146711475 + R3hdm1 protein_coding retained_intron MGP_NODShiLtJ_T0021679.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146742256 146802211 + MGP_NODShiLtJ_P0021679 R3hdm1 protein_coding protein_coding MGP_NODShiLtJ_T0021680.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146742279 146753625 + MGP_NODShiLtJ_P0021680 R3hdm1 protein_coding protein_coding MGP_NODShiLtJ_T0021681.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146752112 146794497 + MGP_NODShiLtJ_P0021681 R3hdm1 protein_coding protein_coding MGP_NODShiLtJ_T0021682.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146786228 146793456 + R3hdm1 protein_coding retained_intron MGP_NODShiLtJ_T0021683.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146789278 146794432 + R3hdm1 protein_coding retained_intron MGP_NODShiLtJ_T0021684.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146792149 146803962 + R3hdm1 protein_coding retained_intron MGP_NODShiLtJ_T0021685.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146794457 146809504 + MGP_NODShiLtJ_P0021685 R3hdm1 protein_coding protein_coding MGP_NODShiLtJ_T0021686.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146797051 146830347 + MGP_NODShiLtJ_P0021686 R3hdm1 protein_coding protein_coding MGP_NODShiLtJ_T0021687.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146808083 146812544 + R3hdm1 protein_coding retained_intron MGP_NODShiLtJ_T0021688.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146826106 146860853 + R3hdm1 protein_coding retained_intron MGP_NODShiLtJ_T0021689.1 MGP_NODShiLtJ_G0016298.1 mouse_genomes_project 1 146858496 146860854 + R3hdm1 protein_coding retained_intron MGP_NODShiLtJ_T0023476.1 MGP_NODShiLtJ_G0016695.1 mouse_genomes_project 1 200169230 200170276 + MGP_NODShiLtJ_P0023476 Olfr420 protein_coding protein_coding MGP_NODShiLtJ_T0021125.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102805218 102832638 - MGP_NODShiLtJ_P0021125 Ilkap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021126.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102805222 102816823 - MGP_NODShiLtJ_P0021126 Ilkap protein_coding protein_coding MGP_NODShiLtJ_T0021127.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102807188 102832721 - MGP_NODShiLtJ_P0021127 Ilkap protein_coding protein_coding MGP_NODShiLtJ_T0021128.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102807189 102832693 - Ilkap protein_coding retained_intron MGP_NODShiLtJ_T0021129.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102807316 102816770 - MGP_NODShiLtJ_P0021129 Ilkap protein_coding protein_coding MGP_NODShiLtJ_T0021130.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102807368 102810275 - Ilkap protein_coding retained_intron MGP_NODShiLtJ_T0021131.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102807411 102832731 - MGP_NODShiLtJ_P0021131 Ilkap protein_coding protein_coding MGP_NODShiLtJ_T0021132.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102807412 102832739 - MGP_NODShiLtJ_P0021132 Ilkap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021133.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102813235 102832753 - Ilkap protein_coding processed_transcript MGP_NODShiLtJ_T0021134.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102816821 102832723 - MGP_NODShiLtJ_P0021134 Ilkap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021135.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102817451 102821001 - Ilkap protein_coding retained_intron MGP_NODShiLtJ_T0021136.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102817540 102832716 - MGP_NODShiLtJ_P0021136 Ilkap protein_coding protein_coding MGP_NODShiLtJ_T0021137.1 MGP_NODShiLtJ_G0016177.1 mouse_genomes_project 1 102822430 102832732 - Ilkap protein_coding retained_intron MGP_NODShiLtJ_T0009405.1 MGP_NODShiLtJ_G0007538.1 mouse_genomes_project 1 70881904 70882042 - Gm24513 miRNA miRNA MGP_NODShiLtJ_T0000785.1 MGP_NODShiLtJ_G0000716.1 mouse_genomes_project 1 222538763 222542327 + TEC TEC MGP_NODShiLtJ_T0020552.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875634 84884156 + MGP_NODShiLtJ_P0020552 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020553.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875647 84884155 + MGP_NODShiLtJ_P0020553 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020554.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875665 84878562 + MGP_NODShiLtJ_P0020554 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020555.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875671 84881481 + MGP_NODShiLtJ_P0020555 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020556.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875672 84882497 + MGP_NODShiLtJ_P0020556 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020557.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875686 84882591 + MGP_NODShiLtJ_P0020557 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020558.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875688 84880368 + MGP_NODShiLtJ_P0020558 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020559.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875791 84882506 + MGP_NODShiLtJ_P0020559 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020560.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84875817 84878031 + MGP_NODShiLtJ_P0020560 Gmppa protein_coding protein_coding MGP_NODShiLtJ_T0020561.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84876646 84883010 + MGP_NODShiLtJ_P0020561 Gmppa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020562.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84882601 84883914 + Gmppa protein_coding retained_intron MGP_NODShiLtJ_T0020563.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84883147 84884155 + Gmppa protein_coding retained_intron MGP_NODShiLtJ_T0020564.1 MGP_NODShiLtJ_G0016053.1 mouse_genomes_project 1 84883205 84884161 + Gmppa protein_coding retained_intron MGP_NODShiLtJ_T0012202.1 MGP_NODShiLtJ_G0010310.1 mouse_genomes_project 1 191846477 191846789 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019646.1 MGP_NODShiLtJ_G0015891.1 mouse_genomes_project 1 61115262 61209729 - MGP_NODShiLtJ_P0019646 Pgap1 protein_coding protein_coding MGP_NODShiLtJ_T0019647.1 MGP_NODShiLtJ_G0015891.1 mouse_genomes_project 1 61173133 61209731 - Pgap1 protein_coding retained_intron MGP_NODShiLtJ_T0019648.1 MGP_NODShiLtJ_G0015891.1 mouse_genomes_project 1 61176763 61180010 - Pgap1 protein_coding retained_intron MGP_NODShiLtJ_T0019649.1 MGP_NODShiLtJ_G0015891.1 mouse_genomes_project 1 61206649 61209674 - Pgap1 protein_coding retained_intron MGP_NODShiLtJ_T0022624.1 MGP_NODShiLtJ_G0016496.1 mouse_genomes_project 1 180588884 180611853 - MGP_NODShiLtJ_P0022624 Tor3a protein_coding protein_coding MGP_NODShiLtJ_T0022625.1 MGP_NODShiLtJ_G0016496.1 mouse_genomes_project 1 180588884 180611853 - MGP_NODShiLtJ_P0022625 Tor3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022626.1 MGP_NODShiLtJ_G0016496.1 mouse_genomes_project 1 180588884 180611822 - MGP_NODShiLtJ_P0022626 Tor3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022627.1 MGP_NODShiLtJ_G0016496.1 mouse_genomes_project 1 180590290 180611811 - MGP_NODShiLtJ_P0022627 Tor3a protein_coding protein_coding MGP_NODShiLtJ_T0022628.1 MGP_NODShiLtJ_G0016496.1 mouse_genomes_project 1 180590939 180593726 - Tor3a protein_coding processed_transcript MGP_NODShiLtJ_T0022629.1 MGP_NODShiLtJ_G0016496.1 mouse_genomes_project 1 180597166 180604249 - Tor3a protein_coding processed_transcript MGP_NODShiLtJ_T0022630.1 MGP_NODShiLtJ_G0016496.1 mouse_genomes_project 1 180604210 180611832 - MGP_NODShiLtJ_P0022630 Tor3a protein_coding protein_coding MGP_NODShiLtJ_T0005585.1 MGP_NODShiLtJ_G0004697.1 mouse_genomes_project 1 5394535 5421155 + Gm30414 lincRNA lincRNA MGP_NODShiLtJ_T0020418.1 MGP_NODShiLtJ_G0016038.1 mouse_genomes_project 1 84570227 84575365 + MGP_NODShiLtJ_P0020418 Fam134a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020419.1 MGP_NODShiLtJ_G0016038.1 mouse_genomes_project 1 84570235 84575369 + MGP_NODShiLtJ_P0020419 Fam134a protein_coding protein_coding MGP_NODShiLtJ_T0020420.1 MGP_NODShiLtJ_G0016038.1 mouse_genomes_project 1 84570243 84575365 + MGP_NODShiLtJ_P0020420 Fam134a protein_coding protein_coding MGP_NODShiLtJ_T0020421.1 MGP_NODShiLtJ_G0016038.1 mouse_genomes_project 1 84570429 84572120 + MGP_NODShiLtJ_P0020421 Fam134a protein_coding protein_coding MGP_NODShiLtJ_T0020422.1 MGP_NODShiLtJ_G0016038.1 mouse_genomes_project 1 84570614 84575363 + MGP_NODShiLtJ_P0020422 Fam134a protein_coding protein_coding MGP_NODShiLtJ_T0020423.1 MGP_NODShiLtJ_G0016038.1 mouse_genomes_project 1 84570631 84571833 + MGP_NODShiLtJ_P0020423 Fam134a protein_coding protein_coding MGP_NODShiLtJ_T0020424.1 MGP_NODShiLtJ_G0016038.1 mouse_genomes_project 1 84570827 84571565 + Fam134a protein_coding retained_intron MGP_NODShiLtJ_T0020425.1 MGP_NODShiLtJ_G0016038.1 mouse_genomes_project 1 84572759 84573217 + MGP_NODShiLtJ_P0020425 Fam134a protein_coding protein_coding MGP_NODShiLtJ_T0000725.1 MGP_NODShiLtJ_G0000659.1 mouse_genomes_project 1 198486961 198487822 + TEC TEC MGP_NODShiLtJ_T0005706.1 MGP_NODShiLtJ_G0004786.1 mouse_genomes_project 1 76079589 76095589 + Gm15669 lincRNA lincRNA MGP_NODShiLtJ_T0101471.1 MGP_NODShiLtJ_G0039641.1 mouse_genomes_project 1 66124766 66133856 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0021956.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152881296 152934059 - MGP_NODShiLtJ_P0021956 protein_coding protein_coding MGP_NODShiLtJ_T0021957.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152881305 152934121 - MGP_NODShiLtJ_P0021957 protein_coding protein_coding MGP_NODShiLtJ_T0021960.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152893947 152896752 - protein_coding processed_transcript MGP_NODShiLtJ_T0021961.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152896649 152908689 - MGP_NODShiLtJ_P0021961 protein_coding protein_coding MGP_NODShiLtJ_T0021962.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152908402 152934119 - MGP_NODShiLtJ_P0021962 protein_coding protein_coding MGP_NODShiLtJ_T0021963.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152908660 152934099 - MGP_NODShiLtJ_P0021963 protein_coding protein_coding MGP_NODShiLtJ_T0021964.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152909790 152934101 - protein_coding retained_intron MGP_NODShiLtJ_T0021965.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152910081 152934023 - MGP_NODShiLtJ_P0021965 protein_coding protein_coding MGP_NODShiLtJ_T0021966.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152917579 152934022 - protein_coding retained_intron MGP_NODShiLtJ_T0021967.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152917832 152934109 - protein_coding processed_transcript MGP_NODShiLtJ_T0021968.1 MGP_NODShiLtJ_G0016361.1 mouse_genomes_project 1 152927001 152934121 - protein_coding retained_intron MGP_NODShiLtJ_T0000355.1 MGP_NODShiLtJ_G0000293.1 mouse_genomes_project 1 2928492 2930524 + TEC TEC MGP_NODShiLtJ_T0022270.1 MGP_NODShiLtJ_G0016428.1 mouse_genomes_project 1 159507717 159813825 - MGP_NODShiLtJ_P0022270 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022271.1 MGP_NODShiLtJ_G0016428.1 mouse_genomes_project 1 159533313 159813825 - MGP_NODShiLtJ_P0022271 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022272.1 MGP_NODShiLtJ_G0016428.1 mouse_genomes_project 1 159736067 159806991 - MGP_NODShiLtJ_P0022272 protein_coding protein_coding MGP_NODShiLtJ_T0098563.1 MGP_NODShiLtJ_G0036957.1 mouse_genomes_project 1 153612118 153612225 - Gm24517 snRNA snRNA MGP_NODShiLtJ_T0005923.1 MGP_NODShiLtJ_G0004958.1 mouse_genomes_project 1 191413083 191415124 - Gm15853 lincRNA lincRNA MGP_NODShiLtJ_T0023696.1 MGP_NODShiLtJ_G0016741.1 mouse_genomes_project 1 207526573 207530360 - MGP_NODShiLtJ_P0023696 Mixl1 protein_coding protein_coding MGP_NODShiLtJ_T0023177.1 MGP_NODShiLtJ_G0016613.1 mouse_genomes_project 1 196634785 196658650 - MGP_NODShiLtJ_P0023177 Pcp4l1 protein_coding protein_coding MGP_NODShiLtJ_T0011954.1 MGP_NODShiLtJ_G0010062.1 mouse_genomes_project 1 70630519 70630765 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000482.1 MGP_NODShiLtJ_G0000418.1 mouse_genomes_project 1 69139002 69140367 + TEC TEC MGP_NODShiLtJ_T0023481.1 MGP_NODShiLtJ_G0016699.1 mouse_genomes_project 1 200468389 200469319 + MGP_NODShiLtJ_P0023481 Olfr417 protein_coding protein_coding MGP_NODShiLtJ_T0099812.1 MGP_NODShiLtJ_G0038206.1 mouse_genomes_project 1 185588991 185589074 + Gm22357 snoRNA snoRNA MGP_NODShiLtJ_T0011977.1 MGP_NODShiLtJ_G0010085.1 mouse_genomes_project 1 80918760 80919111 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023747.1 MGP_NODShiLtJ_G0016754.1 mouse_genomes_project 1 208271627 208384267 + MGP_NODShiLtJ_P0023747 Cnih3 protein_coding protein_coding MGP_NODShiLtJ_T0023748.1 MGP_NODShiLtJ_G0016754.1 mouse_genomes_project 1 208271629 208385000 + MGP_NODShiLtJ_P0023748 Cnih3 protein_coding protein_coding MGP_NODShiLtJ_T0023749.1 MGP_NODShiLtJ_G0016754.1 mouse_genomes_project 1 208272197 208383645 + MGP_NODShiLtJ_P0023749 Cnih3 protein_coding protein_coding MGP_NODShiLtJ_T0021154.1 MGP_NODShiLtJ_G0016182.1 mouse_genomes_project 1 103252465 103301418 + MGP_NODShiLtJ_P0021154 Twist2 protein_coding protein_coding MGP_NODShiLtJ_T0021155.1 MGP_NODShiLtJ_G0016182.1 mouse_genomes_project 1 103252474 103254999 + MGP_NODShiLtJ_P0021155 Twist2 protein_coding protein_coding MGP_NODShiLtJ_T0099810.1 MGP_NODShiLtJ_G0038204.1 mouse_genomes_project 1 185588328 185588408 + Gm26224 snoRNA snoRNA MGP_NODShiLtJ_T0011942.1 MGP_NODShiLtJ_G0010050.1 mouse_genomes_project 1 68137624 68138451 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000418.1 MGP_NODShiLtJ_G0000355.1 mouse_genomes_project 1 35322384 35325994 + TEC TEC MGP_NODShiLtJ_T0000501.1 MGP_NODShiLtJ_G0000437.1 mouse_genomes_project 1 78640586 78642472 + TEC TEC MGP_NODShiLtJ_T0000635.1 MGP_NODShiLtJ_G0000570.1 mouse_genomes_project 1 157630427 157633447 + TEC TEC MGP_NODShiLtJ_T0000636.1 MGP_NODShiLtJ_G0000570.1 mouse_genomes_project 1 157631346 157633447 + TEC TEC MGP_NODShiLtJ_T0011866.1 MGP_NODShiLtJ_G0009974.1 mouse_genomes_project 1 47256541 47256994 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022093.1 MGP_NODShiLtJ_G0016393.1 mouse_genomes_project 1 154731685 154751306 - MGP_NODShiLtJ_P0022093 Timm17a protein_coding protein_coding MGP_NODShiLtJ_T0022094.1 MGP_NODShiLtJ_G0016393.1 mouse_genomes_project 1 154738512 154747620 - Timm17a protein_coding retained_intron MGP_NODShiLtJ_T0022095.1 MGP_NODShiLtJ_G0016393.1 mouse_genomes_project 1 154741184 154751219 - MGP_NODShiLtJ_P0022095 Timm17a protein_coding protein_coding MGP_NODShiLtJ_T0022096.1 MGP_NODShiLtJ_G0016393.1 mouse_genomes_project 1 154746917 154748899 - MGP_NODShiLtJ_P0022096 Timm17a protein_coding protein_coding MGP_NODShiLtJ_T0022911.1 MGP_NODShiLtJ_G0016547.1 mouse_genomes_project 1 188905303 188919578 + MGP_NODShiLtJ_P0022911 Sele protein_coding protein_coding MGP_NODShiLtJ_T0022891.1 MGP_NODShiLtJ_G0016542.1 mouse_genomes_project 1 188520762 188538644 - MGP_NODShiLtJ_P0022891 Mettl11b protein_coding protein_coding MGP_NODShiLtJ_T0022892.1 MGP_NODShiLtJ_G0016542.1 mouse_genomes_project 1 188521505 188538644 - MGP_NODShiLtJ_P0022892 Mettl11b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019255.1 MGP_NODShiLtJ_G0015813.1 mouse_genomes_project 1 41442706 41454824 - MGP_NODShiLtJ_P0019255 Txndc9 protein_coding protein_coding MGP_NODShiLtJ_T0019256.1 MGP_NODShiLtJ_G0015813.1 mouse_genomes_project 1 41444911 41455402 - MGP_NODShiLtJ_P0019256 Txndc9 protein_coding protein_coding MGP_NODShiLtJ_T0019257.1 MGP_NODShiLtJ_G0015813.1 mouse_genomes_project 1 41444911 41454752 - MGP_NODShiLtJ_P0019257 Txndc9 protein_coding protein_coding MGP_NODShiLtJ_T0019258.1 MGP_NODShiLtJ_G0015813.1 mouse_genomes_project 1 41444913 41454733 - Txndc9 protein_coding retained_intron MGP_NODShiLtJ_T0019259.1 MGP_NODShiLtJ_G0015813.1 mouse_genomes_project 1 41445157 41453363 - MGP_NODShiLtJ_P0019259 Txndc9 protein_coding protein_coding MGP_NODShiLtJ_T0019260.1 MGP_NODShiLtJ_G0015813.1 mouse_genomes_project 1 41445160 41455125 - MGP_NODShiLtJ_P0019260 Txndc9 protein_coding protein_coding MGP_NODShiLtJ_T0019261.1 MGP_NODShiLtJ_G0015813.1 mouse_genomes_project 1 41447775 41454175 - MGP_NODShiLtJ_P0019261 Txndc9 protein_coding protein_coding MGP_NODShiLtJ_T0019262.1 MGP_NODShiLtJ_G0015813.1 mouse_genomes_project 1 41453431 41454771 - Txndc9 protein_coding retained_intron MGP_NODShiLtJ_T0099751.1 MGP_NODShiLtJ_G0038145.1 mouse_genomes_project 1 43093430 43093540 - Snord89 snoRNA snoRNA MGP_NODShiLtJ_T0011153.1 MGP_NODShiLtJ_G0009286.1 mouse_genomes_project 1 220697969 220698258 - Gm23583 misc_RNA misc_RNA MGP_NODShiLtJ_T0023456.1 MGP_NODShiLtJ_G0016681.1 mouse_genomes_project 1 199561939 199587569 - MGP_NODShiLtJ_P0023456 AI607873 protein_coding protein_coding MGP_NODShiLtJ_T0023457.1 MGP_NODShiLtJ_G0016681.1 mouse_genomes_project 1 199562192 199576797 - MGP_NODShiLtJ_P0023457 AI607873 protein_coding protein_coding MGP_NODShiLtJ_T0019404.1 MGP_NODShiLtJ_G0015845.1 mouse_genomes_project 1 47097635 47139308 - MGP_NODShiLtJ_P0019404 Fhl2 protein_coding protein_coding MGP_NODShiLtJ_T0023211.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196739902 196743841 + MGP_NODShiLtJ_P0023211 B4galt3 protein_coding protein_coding MGP_NODShiLtJ_T0023212.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196739906 196741495 + MGP_NODShiLtJ_P0023212 B4galt3 protein_coding protein_coding MGP_NODShiLtJ_T0023213.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196739909 196746437 + MGP_NODShiLtJ_P0023213 B4galt3 protein_coding protein_coding MGP_NODShiLtJ_T0023214.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196739917 196741596 + B4galt3 protein_coding retained_intron MGP_NODShiLtJ_T0023215.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196739937 196746430 + B4galt3 protein_coding retained_intron MGP_NODShiLtJ_T0023216.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196739971 196740923 + B4galt3 protein_coding processed_transcript MGP_NODShiLtJ_T0023217.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196740381 196741198 + B4galt3 protein_coding retained_intron MGP_NODShiLtJ_T0023218.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196741195 196742160 + MGP_NODShiLtJ_P0023218 B4galt3 protein_coding protein_coding MGP_NODShiLtJ_T0023219.1 MGP_NODShiLtJ_G0016620.1 mouse_genomes_project 1 196743069 196746428 + B4galt3 protein_coding retained_intron MGP_NODShiLtJ_T0005611.1 MGP_NODShiLtJ_G0004718.1 mouse_genomes_project 1 33496398 33580902 - lincRNA lincRNA MGP_NODShiLtJ_T0000379.1 MGP_NODShiLtJ_G0000317.1 mouse_genomes_project 1 12718718 12720967 - TEC TEC MGP_NODShiLtJ_T0002898.1 MGP_NODShiLtJ_G0002721.1 mouse_genomes_project 1 193144249 193268235 + Gm20711 antisense antisense MGP_NODShiLtJ_T0000511.1 MGP_NODShiLtJ_G0000447.1 mouse_genomes_project 1 86750346 86754109 - TEC TEC MGP_NODShiLtJ_T0011755.1 MGP_NODShiLtJ_G0009863.1 mouse_genomes_project 1 5307628 5310533 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000430.1 MGP_NODShiLtJ_G0000366.1 mouse_genomes_project 1 37096659 37098299 + TEC TEC MGP_NODShiLtJ_T0021532.1 MGP_NODShiLtJ_G0016268.1 mouse_genomes_project 1 137057071 137059895 + MGP_NODShiLtJ_P0021532 Tmem185b protein_coding protein_coding MGP_NODShiLtJ_T0021533.1 MGP_NODShiLtJ_G0016268.1 mouse_genomes_project 1 137057084 137058141 + Tmem185b protein_coding processed_transcript MGP_NODShiLtJ_T0000464.1 MGP_NODShiLtJ_G0000400.1 mouse_genomes_project 1 61748844 61750639 - TEC TEC MGP_NODShiLtJ_T0005781.1 MGP_NODShiLtJ_G0004845.1 mouse_genomes_project 1 103802176 103807555 + Gm29099 lincRNA lincRNA MGP_NODShiLtJ_T0019769.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65401616 65418247 - Clk1 protein_coding retained_intron MGP_NODShiLtJ_T0019770.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65403423 65404285 - Clk1 protein_coding processed_transcript MGP_NODShiLtJ_T0019771.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65403423 65404861 - Clk1 protein_coding processed_transcript MGP_NODShiLtJ_T0019772.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65403423 65408181 - Clk1 protein_coding retained_intron MGP_NODShiLtJ_T0019773.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65403423 65418247 - MGP_NODShiLtJ_P0019773 Clk1 protein_coding protein_coding MGP_NODShiLtJ_T0019774.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65403423 65418247 - MGP_NODShiLtJ_P0019774 Clk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019775.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65403423 65418247 - MGP_NODShiLtJ_P0019775 Clk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019776.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65403739 65405249 - Clk1 protein_coding processed_transcript MGP_NODShiLtJ_T0019777.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65406013 65412685 - Clk1 protein_coding retained_intron MGP_NODShiLtJ_T0019778.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65406038 65413546 - Clk1 protein_coding retained_intron MGP_NODShiLtJ_T0019779.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65407557 65418247 - Clk1 protein_coding retained_intron MGP_NODShiLtJ_T0019780.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65408325 65408842 - Clk1 protein_coding retained_intron MGP_NODShiLtJ_T0019781.1 MGP_NODShiLtJ_G0015915.1 mouse_genomes_project 1 65413911 65418247 - Clk1 protein_coding retained_intron MGP_NODShiLtJ_T0002831.1 MGP_NODShiLtJ_G0002669.1 mouse_genomes_project 1 149397128 149497249 + antisense antisense MGP_NODShiLtJ_T0023143.1 MGP_NODShiLtJ_G0016605.1 mouse_genomes_project 1 196305356 196312016 - MGP_NODShiLtJ_P0023143 Fcrlb protein_coding protein_coding MGP_NODShiLtJ_T0098504.1 MGP_NODShiLtJ_G0036898.1 mouse_genomes_project 1 2131164 2131267 - Gm25493 snRNA snRNA MGP_NODShiLtJ_T0012230.1 MGP_NODShiLtJ_G0010338.1 mouse_genomes_project 1 208188160 208190007 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005924.1 MGP_NODShiLtJ_G0004959.1 mouse_genomes_project 1 192027752 192049910 - Gm16701 lincRNA lincRNA MGP_NODShiLtJ_T0000363.1 MGP_NODShiLtJ_G0000301.1 mouse_genomes_project 1 8394266 8395646 + TEC TEC MGP_NODShiLtJ_T0000771.1 MGP_NODShiLtJ_G0000703.1 mouse_genomes_project 1 217114150 217115035 - TEC TEC MGP_NODShiLtJ_T0021092.1 MGP_NODShiLtJ_G0016170.1 mouse_genomes_project 1 102568863 102571555 + Rbm44 protein_coding retained_intron MGP_NODShiLtJ_T0021093.1 MGP_NODShiLtJ_G0016170.1 mouse_genomes_project 1 102568875 102576528 + MGP_NODShiLtJ_P0021093 Rbm44 protein_coding protein_coding MGP_NODShiLtJ_T0021094.1 MGP_NODShiLtJ_G0016170.1 mouse_genomes_project 1 102568877 102594019 + MGP_NODShiLtJ_P0021094 Rbm44 protein_coding protein_coding MGP_NODShiLtJ_T0021095.1 MGP_NODShiLtJ_G0016170.1 mouse_genomes_project 1 102591852 102593517 + Rbm44 protein_coding retained_intron MGP_NODShiLtJ_T0020843.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825018 96918278 + Armc9 protein_coding retained_intron MGP_NODShiLtJ_T0020844.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825022 96885521 + Armc9 protein_coding retained_intron MGP_NODShiLtJ_T0020845.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825022 96931779 + Armc9 protein_coding retained_intron MGP_NODShiLtJ_T0020846.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825024 96840670 + Armc9 protein_coding retained_intron MGP_NODShiLtJ_T0020847.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825036 96850400 + Armc9 protein_coding processed_transcript MGP_NODShiLtJ_T0020848.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825036 96949713 + MGP_NODShiLtJ_P0020848 Armc9 protein_coding protein_coding MGP_NODShiLtJ_T0020849.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825037 96835178 + MGP_NODShiLtJ_P0020849 Armc9 protein_coding protein_coding MGP_NODShiLtJ_T0020850.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825048 96951286 + MGP_NODShiLtJ_P0020850 Armc9 protein_coding protein_coding MGP_NODShiLtJ_T0020851.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825053 96924441 + MGP_NODShiLtJ_P0020851 Armc9 protein_coding protein_coding MGP_NODShiLtJ_T0020852.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96825057 96848251 + Armc9 protein_coding retained_intron MGP_NODShiLtJ_T0020853.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96867731 96924344 + MGP_NODShiLtJ_P0020853 Armc9 protein_coding protein_coding MGP_NODShiLtJ_T0020854.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96873837 96924441 + MGP_NODShiLtJ_P0020854 Armc9 protein_coding protein_coding MGP_NODShiLtJ_T0020855.1 MGP_NODShiLtJ_G0016114.1 mouse_genomes_project 1 96916517 96940906 + MGP_NODShiLtJ_P0020855 Armc9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000411.1 MGP_NODShiLtJ_G0000348.1 mouse_genomes_project 1 26461519 26466153 - TEC TEC MGP_NODShiLtJ_T0012221.1 MGP_NODShiLtJ_G0010329.1 mouse_genomes_project 1 203182931 203183768 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023000.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190810607 190895767 + MGP_NODShiLtJ_P0023000 Cd247 protein_coding protein_coding MGP_NODShiLtJ_T0023001.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190810607 190895767 + MGP_NODShiLtJ_P0023001 Cd247 protein_coding protein_coding MGP_NODShiLtJ_T0023002.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190810607 190895767 + MGP_NODShiLtJ_P0023002 Cd247 protein_coding protein_coding MGP_NODShiLtJ_T0023003.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190810615 190886284 + MGP_NODShiLtJ_P0023003 Cd247 protein_coding protein_coding MGP_NODShiLtJ_T0023004.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190810649 190892050 + MGP_NODShiLtJ_P0023004 Cd247 protein_coding protein_coding MGP_NODShiLtJ_T0023005.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190810691 190893708 + MGP_NODShiLtJ_P0023005 Cd247 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023006.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190810691 190894863 + MGP_NODShiLtJ_P0023006 Cd247 protein_coding protein_coding MGP_NODShiLtJ_T0023007.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190882432 190885773 + Cd247 protein_coding retained_intron MGP_NODShiLtJ_T0023008.1 MGP_NODShiLtJ_G0016568.1 mouse_genomes_project 1 190889268 190901891 + Cd247 protein_coding processed_transcript MGP_NODShiLtJ_T0011998.1 MGP_NODShiLtJ_G0010106.1 mouse_genomes_project 1 91974860 91976864 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019602.1 MGP_NODShiLtJ_G0015879.1 mouse_genomes_project 1 59312248 59320953 + MGP_NODShiLtJ_P0019602 Mstn protein_coding protein_coding MGP_NODShiLtJ_T0019603.1 MGP_NODShiLtJ_G0015879.1 mouse_genomes_project 1 59312265 59320919 + MGP_NODShiLtJ_P0019603 Mstn protein_coding protein_coding MGP_NODShiLtJ_T0023308.1 MGP_NODShiLtJ_G0016640.1 mouse_genomes_project 1 197386342 197414984 + Cd84 protein_coding processed_transcript MGP_NODShiLtJ_T0023309.1 MGP_NODShiLtJ_G0016640.1 mouse_genomes_project 1 197387184 197401707 + MGP_NODShiLtJ_P0023309 Cd84 protein_coding protein_coding MGP_NODShiLtJ_T0023310.1 MGP_NODShiLtJ_G0016640.1 mouse_genomes_project 1 197387252 197428110 + MGP_NODShiLtJ_P0023310 Cd84 protein_coding protein_coding MGP_NODShiLtJ_T0020394.1 MGP_NODShiLtJ_G0016030.1 mouse_genomes_project 1 84340847 84343646 + MGP_NODShiLtJ_P0020394 Cdk5r2 protein_coding protein_coding MGP_NODShiLtJ_T0023428.1 MGP_NODShiLtJ_G0016670.1 mouse_genomes_project 1 198898924 198899866 + MGP_NODShiLtJ_P0023428 Olfr218 protein_coding protein_coding MGP_NODShiLtJ_T0009391.1 MGP_NODShiLtJ_G0007524.1 mouse_genomes_project 1 39808625 39808766 + miRNA miRNA MGP_NODShiLtJ_T0020441.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84610046 84622362 - MGP_NODShiLtJ_P0020441 Atg9a protein_coding protein_coding MGP_NODShiLtJ_T0020442.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84610051 84622632 - MGP_NODShiLtJ_P0020442 Atg9a protein_coding protein_coding MGP_NODShiLtJ_T0020443.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84610051 84622359 - MGP_NODShiLtJ_P0020443 Atg9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020444.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84610051 84620818 - MGP_NODShiLtJ_P0020444 Atg9a protein_coding protein_coding MGP_NODShiLtJ_T0020445.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84610052 84622359 - MGP_NODShiLtJ_P0020445 Atg9a protein_coding protein_coding MGP_NODShiLtJ_T0020446.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84613425 84616483 - MGP_NODShiLtJ_P0020446 Atg9a protein_coding protein_coding MGP_NODShiLtJ_T0020447.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84617991 84622161 - Atg9a protein_coding retained_intron MGP_NODShiLtJ_T0020448.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84620203 84622398 - Atg9a protein_coding retained_intron MGP_NODShiLtJ_T0020449.1 MGP_NODShiLtJ_G0016041.1 mouse_genomes_project 1 84620551 84622150 - MGP_NODShiLtJ_P0020449 Atg9a protein_coding protein_coding MGP_NODShiLtJ_T0000639.1 MGP_NODShiLtJ_G0000573.1 mouse_genomes_project 1 157694949 157697258 + TEC TEC MGP_NODShiLtJ_T0002811.1 MGP_NODShiLtJ_G0002656.1 mouse_genomes_project 1 104836163 104847499 + Gm28535 antisense antisense MGP_NODShiLtJ_T0022453.1 MGP_NODShiLtJ_G0016465.1 mouse_genomes_project 1 176765904 176833840 - MGP_NODShiLtJ_P0022453 Lamc2 protein_coding protein_coding MGP_NODShiLtJ_T0022454.1 MGP_NODShiLtJ_G0016465.1 mouse_genomes_project 1 176765904 176833440 - MGP_NODShiLtJ_P0022454 Lamc2 protein_coding protein_coding MGP_NODShiLtJ_T0022455.1 MGP_NODShiLtJ_G0016465.1 mouse_genomes_project 1 176767321 176770402 - Lamc2 protein_coding retained_intron MGP_NODShiLtJ_T0022456.1 MGP_NODShiLtJ_G0016465.1 mouse_genomes_project 1 176769265 176772150 - MGP_NODShiLtJ_P0022456 Lamc2 protein_coding protein_coding MGP_NODShiLtJ_T0022457.1 MGP_NODShiLtJ_G0016465.1 mouse_genomes_project 1 176794007 176795896 - Lamc2 protein_coding retained_intron MGP_NODShiLtJ_T0022458.1 MGP_NODShiLtJ_G0016465.1 mouse_genomes_project 1 176801120 176833840 - Lamc2 protein_coding retained_intron MGP_NODShiLtJ_T0012246.1 MGP_NODShiLtJ_G0010354.1 mouse_genomes_project 1 217320609 217320871 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101261.1 MGP_NODShiLtJ_G0039544.1 mouse_genomes_project 1 195576605 195582707 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101262.1 MGP_NODShiLtJ_G0039544.1 mouse_genomes_project 1 195577944 195578145 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0019955.1 MGP_NODShiLtJ_G0015943.1 mouse_genomes_project 1 67778172 67794570 - MGP_NODShiLtJ_P0019955 protein_coding protein_coding MGP_NODShiLtJ_T0019956.1 MGP_NODShiLtJ_G0015943.1 mouse_genomes_project 1 67778223 67877915 - MGP_NODShiLtJ_P0019956 protein_coding protein_coding MGP_NODShiLtJ_T0019957.1 MGP_NODShiLtJ_G0015943.1 mouse_genomes_project 1 67783308 67841530 - MGP_NODShiLtJ_P0019957 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019958.1 MGP_NODShiLtJ_G0015943.1 mouse_genomes_project 1 67785687 67877919 - MGP_NODShiLtJ_P0019958 protein_coding protein_coding MGP_NODShiLtJ_T0019959.1 MGP_NODShiLtJ_G0015943.1 mouse_genomes_project 1 67788334 67791300 - protein_coding retained_intron MGP_NODShiLtJ_T0019960.1 MGP_NODShiLtJ_G0015943.1 mouse_genomes_project 1 67796622 67798285 - protein_coding retained_intron MGP_NODShiLtJ_T0019961.1 MGP_NODShiLtJ_G0015943.1 mouse_genomes_project 1 67808860 67817219 - protein_coding retained_intron MGP_NODShiLtJ_T0019962.1 MGP_NODShiLtJ_G0015943.1 mouse_genomes_project 1 67833809 67879760 - MGP_NODShiLtJ_P0019962 protein_coding protein_coding MGP_NODShiLtJ_T0098523.1 MGP_NODShiLtJ_G0036917.1 mouse_genomes_project 1 58638350 58638459 - Gm23460 snRNA snRNA MGP_NODShiLtJ_T0011806.1 MGP_NODShiLtJ_G0009914.1 mouse_genomes_project 1 22944231 22945033 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019833.1 MGP_NODShiLtJ_G0015924.1 mouse_genomes_project 1 66034115 66100255 - MGP_NODShiLtJ_P0019833 Trak2 protein_coding protein_coding MGP_NODShiLtJ_T0019834.1 MGP_NODShiLtJ_G0015924.1 mouse_genomes_project 1 66037207 66071980 - MGP_NODShiLtJ_P0019834 Trak2 protein_coding protein_coding MGP_NODShiLtJ_T0019835.1 MGP_NODShiLtJ_G0015924.1 mouse_genomes_project 1 66037375 66041141 - Trak2 protein_coding retained_intron MGP_NODShiLtJ_T0019836.1 MGP_NODShiLtJ_G0015924.1 mouse_genomes_project 1 66053894 66055696 - Trak2 protein_coding processed_transcript MGP_NODShiLtJ_T0019837.1 MGP_NODShiLtJ_G0015924.1 mouse_genomes_project 1 66060731 66100254 - MGP_NODShiLtJ_P0019837 Trak2 protein_coding protein_coding MGP_NODShiLtJ_T0019838.1 MGP_NODShiLtJ_G0015924.1 mouse_genomes_project 1 66071544 66100255 - Trak2 protein_coding retained_intron MGP_NODShiLtJ_T0021578.1 MGP_NODShiLtJ_G0016280.1 mouse_genomes_project 1 138270238 138276847 + MGP_NODShiLtJ_P0021578 En1 protein_coding protein_coding MGP_NODShiLtJ_T0000661.1 MGP_NODShiLtJ_G0000595.1 mouse_genomes_project 1 174553852 174555948 + TEC TEC MGP_NODShiLtJ_T0012012.1 MGP_NODShiLtJ_G0010120.1 mouse_genomes_project 1 97514828 97515250 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023295.1 MGP_NODShiLtJ_G0016636.1 mouse_genomes_project 1 197122929 197141612 - MGP_NODShiLtJ_P0023295 Ly9 protein_coding protein_coding MGP_NODShiLtJ_T0023296.1 MGP_NODShiLtJ_G0016636.1 mouse_genomes_project 1 197122938 197141560 - MGP_NODShiLtJ_P0023296 Ly9 protein_coding protein_coding MGP_NODShiLtJ_T0023297.1 MGP_NODShiLtJ_G0016636.1 mouse_genomes_project 1 197122954 197141536 - MGP_NODShiLtJ_P0023297 Ly9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023298.1 MGP_NODShiLtJ_G0016636.1 mouse_genomes_project 1 197124848 197141531 - MGP_NODShiLtJ_P0023298 Ly9 protein_coding protein_coding MGP_NODShiLtJ_T0023299.1 MGP_NODShiLtJ_G0016636.1 mouse_genomes_project 1 197134496 197141562 - Ly9 protein_coding retained_intron MGP_NODShiLtJ_T0101005.1 MGP_NODShiLtJ_G0039396.1 mouse_genomes_project 1 50447315 50462453 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101006.1 MGP_NODShiLtJ_G0039396.1 mouse_genomes_project 1 50447658 50462421 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101007.1 MGP_NODShiLtJ_G0039396.1 mouse_genomes_project 1 50461614 50462230 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0012139.1 MGP_NODShiLtJ_G0010247.1 mouse_genomes_project 1 163380842 163381457 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019447.1 MGP_NODShiLtJ_G0015853.1 mouse_genomes_project 1 48161896 48174170 - MGP_NODShiLtJ_P0019447 Kdelc1 protein_coding protein_coding MGP_NODShiLtJ_T0019448.1 MGP_NODShiLtJ_G0015853.1 mouse_genomes_project 1 48162235 48174115 - Kdelc1 protein_coding retained_intron MGP_NODShiLtJ_T0019449.1 MGP_NODShiLtJ_G0015853.1 mouse_genomes_project 1 48162237 48174127 - MGP_NODShiLtJ_P0019449 Kdelc1 protein_coding protein_coding MGP_NODShiLtJ_T0019450.1 MGP_NODShiLtJ_G0015853.1 mouse_genomes_project 1 48167452 48174127 - Kdelc1 protein_coding retained_intron MGP_NODShiLtJ_T0019451.1 MGP_NODShiLtJ_G0015853.1 mouse_genomes_project 1 48170152 48174063 - MGP_NODShiLtJ_P0019451 Kdelc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011844.1 MGP_NODShiLtJ_G0009952.1 mouse_genomes_project 1 37658453 37658928 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019058.1 MGP_NODShiLtJ_G0015778.1 mouse_genomes_project 1 37664328 37685105 - MGP_NODShiLtJ_P0019058 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000775.1 MGP_NODShiLtJ_G0000707.1 mouse_genomes_project 1 219257050 219257674 + TEC TEC MGP_NODShiLtJ_T0005898.1 MGP_NODShiLtJ_G0004939.1 mouse_genomes_project 1 184429590 184432841 - 4930562F07Rik lincRNA lincRNA MGP_NODShiLtJ_T0005899.1 MGP_NODShiLtJ_G0004939.1 mouse_genomes_project 1 184429590 184432774 - 4930562F07Rik lincRNA lincRNA MGP_NODShiLtJ_T0005900.1 MGP_NODShiLtJ_G0004939.1 mouse_genomes_project 1 184429825 184432798 - 4930562F07Rik lincRNA lincRNA MGP_NODShiLtJ_T0002896.1 MGP_NODShiLtJ_G0002719.1 mouse_genomes_project 1 191415044 191415699 - Gm15853 antisense antisense MGP_NODShiLtJ_T0021933.1 MGP_NODShiLtJ_G0016354.1 mouse_genomes_project 1 152518766 152533273 + MGP_NODShiLtJ_P0021933 Golt1a protein_coding protein_coding MGP_NODShiLtJ_T0021938.1 MGP_NODShiLtJ_G0016354.1 mouse_genomes_project 1 152518856 152531297 + MGP_NODShiLtJ_P0021938 Golt1a protein_coding protein_coding MGP_NODShiLtJ_T0000521.1 MGP_NODShiLtJ_G0000457.1 mouse_genomes_project 1 90717274 90719141 - TEC TEC MGP_NODShiLtJ_T0023359.1 MGP_NODShiLtJ_G0016649.1 mouse_genomes_project 1 197761852 197771890 - MGP_NODShiLtJ_P0023359 Pea15a protein_coding protein_coding MGP_NODShiLtJ_T0023360.1 MGP_NODShiLtJ_G0016649.1 mouse_genomes_project 1 197761852 197771890 - MGP_NODShiLtJ_P0023360 Pea15a protein_coding protein_coding MGP_NODShiLtJ_T0023361.1 MGP_NODShiLtJ_G0016649.1 mouse_genomes_project 1 197763537 197764937 - Pea15a protein_coding processed_transcript MGP_NODShiLtJ_T0023362.1 MGP_NODShiLtJ_G0016649.1 mouse_genomes_project 1 197764282 197771783 - MGP_NODShiLtJ_P0023362 Pea15a protein_coding protein_coding MGP_NODShiLtJ_T0023363.1 MGP_NODShiLtJ_G0016649.1 mouse_genomes_project 1 197764896 197771890 - Pea15a protein_coding retained_intron MGP_NODShiLtJ_T0000768.1 MGP_NODShiLtJ_G0000700.1 mouse_genomes_project 1 214974276 214974769 - TEC TEC MGP_NODShiLtJ_T0005690.1 MGP_NODShiLtJ_G0004773.1 mouse_genomes_project 1 68860281 68890664 + Gm11588 lincRNA lincRNA MGP_NODShiLtJ_T0012199.1 MGP_NODShiLtJ_G0010307.1 mouse_genomes_project 1 191077089 191077442 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011899.1 MGP_NODShiLtJ_G0010007.1 mouse_genomes_project 1 54970762 54972468 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022602.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180234496 180344066 - MGP_NODShiLtJ_P0022602 Axdnd1 protein_coding protein_coding MGP_NODShiLtJ_T0022603.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180234496 180345916 - MGP_NODShiLtJ_P0022603 Axdnd1 protein_coding protein_coding MGP_NODShiLtJ_T0022604.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180241760 180345184 - MGP_NODShiLtJ_P0022604 Axdnd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022605.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180241760 180344138 - MGP_NODShiLtJ_P0022605 Axdnd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022606.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180271982 180294635 - Axdnd1 protein_coding processed_transcript MGP_NODShiLtJ_T0022607.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180283661 180323913 - Axdnd1 protein_coding processed_transcript MGP_NODShiLtJ_T0022608.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180284254 180322461 - MGP_NODShiLtJ_P0022608 Axdnd1 protein_coding protein_coding MGP_NODShiLtJ_T0022609.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180323965 180327194 - Axdnd1 protein_coding processed_transcript MGP_NODShiLtJ_T0022610.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180344116 180345642 - MGP_NODShiLtJ_P0022610 Axdnd1 protein_coding protein_coding MGP_NODShiLtJ_T0022611.1 MGP_NODShiLtJ_G0016493.1 mouse_genomes_project 1 180344116 180345678 - MGP_NODShiLtJ_P0022611 Axdnd1 protein_coding protein_coding MGP_NODShiLtJ_T0018823.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15734468 15751766 - MGP_NODShiLtJ_P0018823 Tceb1 protein_coding protein_coding MGP_NODShiLtJ_T0018824.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15735509 15751924 - MGP_NODShiLtJ_P0018824 Tceb1 protein_coding protein_coding MGP_NODShiLtJ_T0018825.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15735884 15751900 - MGP_NODShiLtJ_P0018825 Tceb1 protein_coding protein_coding MGP_NODShiLtJ_T0018826.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15735911 15751920 - MGP_NODShiLtJ_P0018826 Tceb1 protein_coding protein_coding MGP_NODShiLtJ_T0018827.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15735933 15751796 - MGP_NODShiLtJ_P0018827 Tceb1 protein_coding protein_coding MGP_NODShiLtJ_T0018828.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15736085 15741868 - MGP_NODShiLtJ_P0018828 Tceb1 protein_coding protein_coding MGP_NODShiLtJ_T0018829.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15736215 15751507 - MGP_NODShiLtJ_P0018829 Tceb1 protein_coding protein_coding MGP_NODShiLtJ_T0018830.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15740660 15751782 - Tceb1 protein_coding retained_intron MGP_NODShiLtJ_T0018831.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15740779 15751797 - Tceb1 protein_coding retained_intron MGP_NODShiLtJ_T0018832.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15741509 15751760 - Tceb1 protein_coding retained_intron MGP_NODShiLtJ_T0018833.1 MGP_NODShiLtJ_G0015724.1 mouse_genomes_project 1 15741564 15751924 - Tceb1 protein_coding retained_intron MGP_NODShiLtJ_T0011773.1 MGP_NODShiLtJ_G0009881.1 mouse_genomes_project 1 9728086 9728695 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023426.1 MGP_NODShiLtJ_G0016669.1 mouse_genomes_project 1 198870020 198871083 - MGP_NODShiLtJ_P0023426 Olfr1406 protein_coding protein_coding MGP_NODShiLtJ_T0023427.1 MGP_NODShiLtJ_G0016669.1 mouse_genomes_project 1 198870747 198880640 - MGP_NODShiLtJ_P0023427 Olfr1406 protein_coding protein_coding MGP_NODShiLtJ_T0020677.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90466829 90752710 - MGP_NODShiLtJ_P0020677 Dock10 protein_coding protein_coding MGP_NODShiLtJ_T0020678.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90466944 90573591 - MGP_NODShiLtJ_P0020678 Dock10 protein_coding protein_coding MGP_NODShiLtJ_T0020679.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90467309 90654566 - MGP_NODShiLtJ_P0020679 Dock10 protein_coding protein_coding MGP_NODShiLtJ_T0020680.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90467397 90497741 - MGP_NODShiLtJ_P0020680 Dock10 protein_coding protein_coding MGP_NODShiLtJ_T0020681.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90467469 90654532 - MGP_NODShiLtJ_P0020681 Dock10 protein_coding protein_coding MGP_NODShiLtJ_T0020682.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90468647 90472080 - Dock10 protein_coding retained_intron MGP_NODShiLtJ_T0020683.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90487059 90488942 - Dock10 protein_coding retained_intron MGP_NODShiLtJ_T0020684.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90560127 90752789 - Dock10 protein_coding retained_intron MGP_NODShiLtJ_T0020685.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90565830 90695725 - MGP_NODShiLtJ_P0020685 Dock10 protein_coding protein_coding MGP_NODShiLtJ_T0020686.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90573358 90654549 - MGP_NODShiLtJ_P0020686 Dock10 protein_coding protein_coding MGP_NODShiLtJ_T0020687.1 MGP_NODShiLtJ_G0016077.1 mouse_genomes_project 1 90630884 90752749 - Dock10 protein_coding retained_intron MGP_NODShiLtJ_T0005756.1 MGP_NODShiLtJ_G0004821.1 mouse_genomes_project 1 96403281 96414086 + 9930111H07Rik lincRNA lincRNA MGP_NODShiLtJ_T0016963.1 MGP_NODShiLtJ_G0014995.1 mouse_genomes_project 1 197215463 197220713 - A630035G10Rik processed_transcript lincRNA MGP_NODShiLtJ_T0016964.1 MGP_NODShiLtJ_G0014995.1 mouse_genomes_project 1 197218899 197220756 - A630035G10Rik processed_transcript retained_intron MGP_NODShiLtJ_T0021122.1 MGP_NODShiLtJ_G0016175.1 mouse_genomes_project 1 102782372 102793774 + MGP_NODShiLtJ_P0021122 Klhl30 protein_coding protein_coding MGP_NODShiLtJ_T0000632.1 MGP_NODShiLtJ_G0000567.1 mouse_genomes_project 1 157494845 157495140 + TEC TEC MGP_NODShiLtJ_T0012119.1 MGP_NODShiLtJ_G0010227.1 mouse_genomes_project 1 150649084 150649466 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012071.1 MGP_NODShiLtJ_G0010179.1 mouse_genomes_project 1 128468158 128473232 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000729.1 MGP_NODShiLtJ_G0000663.1 mouse_genomes_project 1 202417601 202420037 + TEC TEC MGP_NODShiLtJ_T0011860.1 MGP_NODShiLtJ_G0009968.1 mouse_genomes_project 1 42211307 42211809 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012257.1 MGP_NODShiLtJ_G0010365.1 mouse_genomes_project 1 221633289 221634217 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099828.1 MGP_NODShiLtJ_G0038222.1 mouse_genomes_project 1 216001898 216002029 - Gm25095 snoRNA snoRNA MGP_NODShiLtJ_T0020163.1 MGP_NODShiLtJ_G0015986.1 mouse_genomes_project 1 76372094 77900561 - MGP_NODShiLtJ_P0020163 Erbb4 protein_coding protein_coding MGP_NODShiLtJ_T0020164.1 MGP_NODShiLtJ_G0015986.1 mouse_genomes_project 1 76372094 77900864 - MGP_NODShiLtJ_P0020164 Erbb4 protein_coding protein_coding MGP_NODShiLtJ_T0020165.1 MGP_NODShiLtJ_G0015986.1 mouse_genomes_project 1 76379954 77361156 - MGP_NODShiLtJ_P0020165 Erbb4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020166.1 MGP_NODShiLtJ_G0015986.1 mouse_genomes_project 1 76379954 77360564 - MGP_NODShiLtJ_P0020166 Erbb4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020167.1 MGP_NODShiLtJ_G0015986.1 mouse_genomes_project 1 76640409 77900561 - MGP_NODShiLtJ_P0020167 Erbb4 protein_coding protein_coding MGP_NODShiLtJ_T0020168.1 MGP_NODShiLtJ_G0015986.1 mouse_genomes_project 1 76679201 76687430 - Erbb4 protein_coding processed_transcript MGP_NODShiLtJ_T0020169.1 MGP_NODShiLtJ_G0015986.1 mouse_genomes_project 1 76687261 76744056 - Erbb4 protein_coding retained_intron MGP_NODShiLtJ_T0012079.1 MGP_NODShiLtJ_G0010187.1 mouse_genomes_project 1 132243113 132243687 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005887.1 MGP_NODShiLtJ_G0004931.1 mouse_genomes_project 1 178054770 178074774 + 4930532M18Rik lincRNA lincRNA MGP_NODShiLtJ_T0005888.1 MGP_NODShiLtJ_G0004931.1 mouse_genomes_project 1 178057410 178074595 + 4930532M18Rik lincRNA lincRNA MGP_NODShiLtJ_T0005723.1 MGP_NODShiLtJ_G0004797.1 mouse_genomes_project 1 82743007 82759839 - Pinc lincRNA lincRNA MGP_NODShiLtJ_T0005724.1 MGP_NODShiLtJ_G0004797.1 mouse_genomes_project 1 82747549 82759839 - Pinc lincRNA lincRNA MGP_NODShiLtJ_T0023162.1 MGP_NODShiLtJ_G0016610.1 mouse_genomes_project 1 196564590 196582420 + MGP_NODShiLtJ_P0023162 Cfap126 protein_coding protein_coding MGP_NODShiLtJ_T0023163.1 MGP_NODShiLtJ_G0016610.1 mouse_genomes_project 1 196564661 196582370 + MGP_NODShiLtJ_P0023163 Cfap126 protein_coding protein_coding MGP_NODShiLtJ_T0023164.1 MGP_NODShiLtJ_G0016610.1 mouse_genomes_project 1 196575545 196582558 + MGP_NODShiLtJ_P0023164 Cfap126 protein_coding protein_coding MGP_NODShiLtJ_T0023165.1 MGP_NODShiLtJ_G0016610.1 mouse_genomes_project 1 196575548 196577007 + Cfap126 protein_coding processed_transcript MGP_NODShiLtJ_T0023166.1 MGP_NODShiLtJ_G0016610.1 mouse_genomes_project 1 196576529 196581631 + MGP_NODShiLtJ_P0023166 Cfap126 protein_coding protein_coding MGP_NODShiLtJ_T0023167.1 MGP_NODShiLtJ_G0016610.1 mouse_genomes_project 1 196577000 196582533 + MGP_NODShiLtJ_P0023167 Cfap126 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023168.1 MGP_NODShiLtJ_G0016610.1 mouse_genomes_project 1 196577024 196581675 + MGP_NODShiLtJ_P0023168 Cfap126 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023169.1 MGP_NODShiLtJ_G0016610.1 mouse_genomes_project 1 196580665 196582250 + MGP_NODShiLtJ_P0023169 Cfap126 protein_coding protein_coding MGP_NODShiLtJ_T0011952.1 MGP_NODShiLtJ_G0010060.1 mouse_genomes_project 1 70204720 70206305 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023429.1 MGP_NODShiLtJ_G0016671.1 mouse_genomes_project 1 198912606 198913640 + MGP_NODShiLtJ_P0023429 Olfr1404 protein_coding protein_coding MGP_NODShiLtJ_T0011861.1 MGP_NODShiLtJ_G0009969.1 mouse_genomes_project 1 42409622 42410394 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011958.1 MGP_NODShiLtJ_G0010066.1 mouse_genomes_project 1 71862504 71862969 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012240.1 MGP_NODShiLtJ_G0010348.1 mouse_genomes_project 1 214279812 214280410 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019813.1 MGP_NODShiLtJ_G0015920.1 mouse_genomes_project 1 65598090 65608899 + MGP_NODShiLtJ_P0019813 Ndufb3 protein_coding protein_coding MGP_NODShiLtJ_T0011777.1 MGP_NODShiLtJ_G0009885.1 mouse_genomes_project 1 11412074 11412761 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009475.1 MGP_NODShiLtJ_G0007608.1 mouse_genomes_project 1 221268036 221268104 - Mir205 miRNA miRNA MGP_NODShiLtJ_T0098587.1 MGP_NODShiLtJ_G0036981.1 mouse_genomes_project 1 202105905 202106012 + Gm23805 snRNA snRNA MGP_NODShiLtJ_T0098513.1 MGP_NODShiLtJ_G0036907.1 mouse_genomes_project 1 34245055 34245162 - Gm23032 snRNA snRNA MGP_NODShiLtJ_T0009387.1 MGP_NODShiLtJ_G0007520.1 mouse_genomes_project 1 37189406 37189479 + Mir6896 miRNA miRNA MGP_NODShiLtJ_T0099768.1 MGP_NODShiLtJ_G0038162.1 mouse_genomes_project 1 70776079 70776114 + Gm26457 snoRNA snoRNA MGP_NODShiLtJ_T0000392.1 MGP_NODShiLtJ_G0000330.1 mouse_genomes_project 1 21925288 21926826 - TEC TEC MGP_NODShiLtJ_T0000393.1 MGP_NODShiLtJ_G0000331.1 mouse_genomes_project 1 23543131 23543764 - TEC TEC MGP_NODShiLtJ_T0002956.1 MGP_NODShiLtJ_G0002765.1 mouse_genomes_project 1 220544724 220546048 + Gm15867 antisense antisense MGP_NODShiLtJ_T0005998.1 MGP_NODShiLtJ_G0005017.1 mouse_genomes_project 1 221267811 221270824 - 4631405K08Rik lincRNA lincRNA MGP_NODShiLtJ_T0101520.1 MGP_NODShiLtJ_G0039690.1 mouse_genomes_project 1 207895661 207895772 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0022973.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190484129 190580658 + MGP_NODShiLtJ_P0022973 Adcy10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022974.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190484129 190580053 + MGP_NODShiLtJ_P0022974 Adcy10 protein_coding protein_coding MGP_NODShiLtJ_T0022975.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190484129 190581032 + MGP_NODShiLtJ_P0022975 Adcy10 protein_coding protein_coding MGP_NODShiLtJ_T0022976.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190484135 190580052 + MGP_NODShiLtJ_P0022976 Adcy10 protein_coding protein_coding MGP_NODShiLtJ_T0022977.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190484139 190488480 + Adcy10 protein_coding processed_transcript MGP_NODShiLtJ_T0022978.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190484157 190580050 + MGP_NODShiLtJ_P0022978 Adcy10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022979.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190502982 190571976 + MGP_NODShiLtJ_P0022979 Adcy10 protein_coding protein_coding MGP_NODShiLtJ_T0022980.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190509018 190547518 + Adcy10 protein_coding retained_intron MGP_NODShiLtJ_T0022981.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190519682 190521494 + Adcy10 protein_coding retained_intron MGP_NODShiLtJ_T0022982.1 MGP_NODShiLtJ_G0016564.1 mouse_genomes_project 1 190547341 190555540 + Adcy10 protein_coding processed_transcript MGP_NODShiLtJ_T0021337.1 MGP_NODShiLtJ_G0016222.1 mouse_genomes_project 1 105588879 105624069 + protein_coding processed_transcript MGP_NODShiLtJ_T0021338.1 MGP_NODShiLtJ_G0016222.1 mouse_genomes_project 1 105588919 105626024 + MGP_NODShiLtJ_P0021338 protein_coding protein_coding MGP_NODShiLtJ_T0021340.1 MGP_NODShiLtJ_G0016222.1 mouse_genomes_project 1 105589399 105624283 + MGP_NODShiLtJ_P0021340 protein_coding protein_coding MGP_NODShiLtJ_T0020892.1 MGP_NODShiLtJ_G0016126.1 mouse_genomes_project 1 97957051 97959262 + Akp3 protein_coding retained_intron MGP_NODShiLtJ_T0020893.1 MGP_NODShiLtJ_G0016126.1 mouse_genomes_project 1 97957086 97960026 + MGP_NODShiLtJ_P0020893 Akp3 protein_coding protein_coding MGP_NODShiLtJ_T0000479.1 MGP_NODShiLtJ_G0000415.1 mouse_genomes_project 1 68967441 68967723 + TEC TEC MGP_NODShiLtJ_T0099801.1 MGP_NODShiLtJ_G0038195.1 mouse_genomes_project 1 159991862 159992004 + Gm26048 snoRNA snoRNA MGP_NODShiLtJ_T0097864.1 MGP_NODShiLtJ_G0036276.1 mouse_genomes_project 1 101678723 101678830 + Gm27648 rRNA rRNA MGP_NODShiLtJ_T0022759.1 MGP_NODShiLtJ_G0016517.1 mouse_genomes_project 1 185593535 185623510 - MGP_NODShiLtJ_P0022759 Dars2 protein_coding protein_coding MGP_NODShiLtJ_T0022760.1 MGP_NODShiLtJ_G0016517.1 mouse_genomes_project 1 185594124 185623494 - Dars2 protein_coding retained_intron MGP_NODShiLtJ_T0022761.1 MGP_NODShiLtJ_G0016517.1 mouse_genomes_project 1 185594433 185600074 - Dars2 protein_coding processed_transcript MGP_NODShiLtJ_T0022762.1 MGP_NODShiLtJ_G0016517.1 mouse_genomes_project 1 185594439 185623508 - Dars2 protein_coding retained_intron MGP_NODShiLtJ_T0022763.1 MGP_NODShiLtJ_G0016517.1 mouse_genomes_project 1 185598114 185623459 - Dars2 protein_coding retained_intron MGP_NODShiLtJ_T0022764.1 MGP_NODShiLtJ_G0016517.1 mouse_genomes_project 1 185615362 185616393 - Dars2 protein_coding retained_intron MGP_NODShiLtJ_T0022765.1 MGP_NODShiLtJ_G0016517.1 mouse_genomes_project 1 185615721 185623482 - Dars2 protein_coding processed_transcript MGP_NODShiLtJ_T0022337.1 MGP_NODShiLtJ_G0016445.1 mouse_genomes_project 1 173697465 173716888 + MGP_NODShiLtJ_P0022337 Pdc protein_coding protein_coding MGP_NODShiLtJ_T0022338.1 MGP_NODShiLtJ_G0016445.1 mouse_genomes_project 1 173697465 173716887 + MGP_NODShiLtJ_P0022338 Pdc protein_coding protein_coding MGP_NODShiLtJ_T0022339.1 MGP_NODShiLtJ_G0016445.1 mouse_genomes_project 1 173697474 173716304 + MGP_NODShiLtJ_P0022339 Pdc protein_coding protein_coding MGP_NODShiLtJ_T0022340.1 MGP_NODShiLtJ_G0016445.1 mouse_genomes_project 1 173697477 173716885 + MGP_NODShiLtJ_P0022340 Pdc protein_coding protein_coding MGP_NODShiLtJ_T0012205.1 MGP_NODShiLtJ_G0010313.1 mouse_genomes_project 1 194668721 194669063 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006001.1 MGP_NODShiLtJ_G0005020.1 mouse_genomes_project 1 222910970 222911321 - Gm37027 lincRNA lincRNA MGP_NODShiLtJ_T0011940.1 MGP_NODShiLtJ_G0010048.1 mouse_genomes_project 1 68021813 68022879 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000666.1 MGP_NODShiLtJ_G0000600.1 mouse_genomes_project 1 176933608 176936946 - TEC TEC MGP_NODShiLtJ_T0012044.1 MGP_NODShiLtJ_G0010152.1 mouse_genomes_project 1 116273886 116274153 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020867.1 MGP_NODShiLtJ_G0016119.1 mouse_genomes_project 1 97228583 97233422 + MGP_NODShiLtJ_P0020867 protein_coding protein_coding MGP_NODShiLtJ_T0020868.1 MGP_NODShiLtJ_G0016119.1 mouse_genomes_project 1 97228594 97231360 + MGP_NODShiLtJ_P0020868 protein_coding protein_coding MGP_NODShiLtJ_T0020869.1 MGP_NODShiLtJ_G0016119.1 mouse_genomes_project 1 97228598 97231578 + protein_coding processed_transcript MGP_NODShiLtJ_T0099826.1 MGP_NODShiLtJ_G0038220.1 mouse_genomes_project 1 212361650 212361782 + Snora36b snoRNA snoRNA MGP_NODShiLtJ_T0005604.1 MGP_NODShiLtJ_G0004712.1 mouse_genomes_project 1 23590390 23590734 + Gm29107 lincRNA lincRNA MGP_NODShiLtJ_T0022931.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189175294 189326013 + MGP_NODShiLtJ_P0022931 Nme7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022933.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189178856 189325588 + MGP_NODShiLtJ_P0022933 Nme7 protein_coding protein_coding MGP_NODShiLtJ_T0022934.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189178911 189221088 + Nme7 protein_coding processed_transcript MGP_NODShiLtJ_T0022935.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189178932 189184638 + Nme7 protein_coding retained_intron MGP_NODShiLtJ_T0022936.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189179258 189325582 + MGP_NODShiLtJ_P0022936 Nme7 protein_coding protein_coding MGP_NODShiLtJ_T0022937.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189179282 189205021 + Nme7 protein_coding retained_intron MGP_NODShiLtJ_T0022938.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189184349 189219717 + MGP_NODShiLtJ_P0022938 Nme7 protein_coding protein_coding MGP_NODShiLtJ_T0022939.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189217060 189263813 + Nme7 protein_coding retained_intron MGP_NODShiLtJ_T0022940.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189243717 189325524 + Nme7 protein_coding processed_transcript MGP_NODShiLtJ_T0022941.1 MGP_NODShiLtJ_G0016554.1 mouse_genomes_project 1 189243717 189325580 + Nme7 protein_coding processed_transcript MGP_NODShiLtJ_T0012258.1 MGP_NODShiLtJ_G0010366.1 mouse_genomes_project 1 222692011 222692369 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019616.1 MGP_NODShiLtJ_G0015884.1 mouse_genomes_project 1 59614305 59628076 + MGP_NODShiLtJ_P0019616 Osgepl1 protein_coding protein_coding MGP_NODShiLtJ_T0019617.1 MGP_NODShiLtJ_G0015884.1 mouse_genomes_project 1 59614335 59627907 + MGP_NODShiLtJ_P0019617 Osgepl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019618.1 MGP_NODShiLtJ_G0015884.1 mouse_genomes_project 1 59614338 59617314 + Osgepl1 protein_coding processed_transcript MGP_NODShiLtJ_T0019619.1 MGP_NODShiLtJ_G0015884.1 mouse_genomes_project 1 59614338 59619340 + Osgepl1 protein_coding retained_intron MGP_NODShiLtJ_T0019620.1 MGP_NODShiLtJ_G0015884.1 mouse_genomes_project 1 59614344 59625797 + MGP_NODShiLtJ_P0019620 Osgepl1 protein_coding protein_coding MGP_NODShiLtJ_T0019621.1 MGP_NODShiLtJ_G0015884.1 mouse_genomes_project 1 59614354 59627900 + MGP_NODShiLtJ_P0019621 Osgepl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019622.1 MGP_NODShiLtJ_G0015884.1 mouse_genomes_project 1 59620390 59627908 + Osgepl1 protein_coding retained_intron MGP_NODShiLtJ_T0023629.1 MGP_NODShiLtJ_G0016733.1 mouse_genomes_project 1 206525814 206527115 + MGP_NODShiLtJ_P0023629 Gm10518 protein_coding protein_coding MGP_NODShiLtJ_T0000415.1 MGP_NODShiLtJ_G0000352.1 mouse_genomes_project 1 30225314 30229523 + TEC TEC MGP_NODShiLtJ_T0024043.1 MGP_NODShiLtJ_G0016816.1 mouse_genomes_project 1 219384540 219458797 + MGP_NODShiLtJ_P0024043 Lpgat1 protein_coding protein_coding MGP_NODShiLtJ_T0024044.1 MGP_NODShiLtJ_G0016816.1 mouse_genomes_project 1 219384540 219386104 + MGP_NODShiLtJ_P0024044 Lpgat1 protein_coding protein_coding MGP_NODShiLtJ_T0024045.1 MGP_NODShiLtJ_G0016816.1 mouse_genomes_project 1 219384733 219386492 + Lpgat1 protein_coding retained_intron MGP_NODShiLtJ_T0024046.1 MGP_NODShiLtJ_G0016816.1 mouse_genomes_project 1 219385095 219451324 + MGP_NODShiLtJ_P0024046 Lpgat1 protein_coding protein_coding MGP_NODShiLtJ_T0024047.1 MGP_NODShiLtJ_G0016816.1 mouse_genomes_project 1 219385227 219429001 + MGP_NODShiLtJ_P0024047 Lpgat1 protein_coding protein_coding MGP_NODShiLtJ_T0023028.1 MGP_NODShiLtJ_G0016571.1 mouse_genomes_project 1 191163810 191203791 + MGP_NODShiLtJ_P0023028 Gpa33 protein_coding protein_coding MGP_NODShiLtJ_T0023029.1 MGP_NODShiLtJ_G0016571.1 mouse_genomes_project 1 191163912 191194780 + MGP_NODShiLtJ_P0023029 Gpa33 protein_coding protein_coding MGP_NODShiLtJ_T0023030.1 MGP_NODShiLtJ_G0016571.1 mouse_genomes_project 1 191163989 191191176 + Gpa33 protein_coding processed_transcript MGP_NODShiLtJ_T0023031.1 MGP_NODShiLtJ_G0016571.1 mouse_genomes_project 1 191164039 191203790 + MGP_NODShiLtJ_P0023031 Gpa33 protein_coding protein_coding MGP_NODShiLtJ_T0021342.1 MGP_NODShiLtJ_G0016224.1 mouse_genomes_project 1 105644057 105649022 + MGP_NODShiLtJ_P0021342 Neu4 protein_coding protein_coding MGP_NODShiLtJ_T0021343.1 MGP_NODShiLtJ_G0016224.1 mouse_genomes_project 1 105644099 105651939 + MGP_NODShiLtJ_P0021343 Neu4 protein_coding protein_coding MGP_NODShiLtJ_T0011947.1 MGP_NODShiLtJ_G0010055.1 mouse_genomes_project 1 68600362 68601068 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000371.1 MGP_NODShiLtJ_G0000309.1 mouse_genomes_project 1 11884940 11885491 - TEC TEC MGP_NODShiLtJ_T0011891.1 MGP_NODShiLtJ_G0009999.1 mouse_genomes_project 1 52901060 52901887 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098583.1 MGP_NODShiLtJ_G0036977.1 mouse_genomes_project 1 197273575 197273630 - Gm26412 snRNA snRNA MGP_NODShiLtJ_T0018869.1 MGP_NODShiLtJ_G0015737.1 mouse_genomes_project 1 20658882 20666007 - MGP_NODShiLtJ_P0018869 Il17f protein_coding protein_coding MGP_NODShiLtJ_T0018870.1 MGP_NODShiLtJ_G0015737.1 mouse_genomes_project 1 20659415 20661290 - Il17f protein_coding retained_intron MGP_NODShiLtJ_T0018871.1 MGP_NODShiLtJ_G0015737.1 mouse_genomes_project 1 20659519 20672227 - MGP_NODShiLtJ_P0018871 Il17f protein_coding protein_coding MGP_NODShiLtJ_T0018872.1 MGP_NODShiLtJ_G0015737.1 mouse_genomes_project 1 20669212 20672219 - Il17f protein_coding processed_transcript MGP_NODShiLtJ_T0016886.1 MGP_NODShiLtJ_G0014974.1 mouse_genomes_project 1 93023695 93055884 - C430014B12Rik processed_transcript antisense MGP_NODShiLtJ_T0016887.1 MGP_NODShiLtJ_G0014974.1 mouse_genomes_project 1 93050013 93055936 - C430014B12Rik processed_transcript antisense MGP_NODShiLtJ_T0016888.1 MGP_NODShiLtJ_G0014974.1 mouse_genomes_project 1 93051843 93055914 - C430014B12Rik processed_transcript retained_intron MGP_NODShiLtJ_T0011945.1 MGP_NODShiLtJ_G0010053.1 mouse_genomes_project 1 68321324 68321560 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005626.1 MGP_NODShiLtJ_G0004731.1 mouse_genomes_project 1 39632256 39632972 + 4930403P22Rik lincRNA lincRNA MGP_NODShiLtJ_T0024054.1 MGP_NODShiLtJ_G0016819.1 mouse_genomes_project 1 219653714 219665719 + MGP_NODShiLtJ_P0024054 Rd3 protein_coding protein_coding MGP_NODShiLtJ_T0024055.1 MGP_NODShiLtJ_G0016819.1 mouse_genomes_project 1 219653717 219662737 + MGP_NODShiLtJ_P0024055 Rd3 protein_coding protein_coding MGP_NODShiLtJ_T0024056.1 MGP_NODShiLtJ_G0016819.1 mouse_genomes_project 1 219654595 219662736 + MGP_NODShiLtJ_P0024056 Rd3 protein_coding protein_coding MGP_NODShiLtJ_T0024057.1 MGP_NODShiLtJ_G0016819.1 mouse_genomes_project 1 219660514 219662737 + Rd3 protein_coding retained_intron MGP_NODShiLtJ_T0011775.1 MGP_NODShiLtJ_G0009883.1 mouse_genomes_project 1 10773965 10774838 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018579.1 MGP_NODShiLtJ_G0015683.1 mouse_genomes_project 1 2550511 2644632 + MGP_NODShiLtJ_P0018579 Atp6v1h protein_coding protein_coding MGP_NODShiLtJ_T0018580.1 MGP_NODShiLtJ_G0015683.1 mouse_genomes_project 1 2562222 2644821 + MGP_NODShiLtJ_P0018580 Atp6v1h protein_coding protein_coding MGP_NODShiLtJ_T0018581.1 MGP_NODShiLtJ_G0015683.1 mouse_genomes_project 1 2562252 2577693 + MGP_NODShiLtJ_P0018581 Atp6v1h protein_coding protein_coding MGP_NODShiLtJ_T0018582.1 MGP_NODShiLtJ_G0015683.1 mouse_genomes_project 1 2562266 2627225 + Atp6v1h protein_coding retained_intron MGP_NODShiLtJ_T0018583.1 MGP_NODShiLtJ_G0015683.1 mouse_genomes_project 1 2562274 2565922 + Atp6v1h protein_coding retained_intron MGP_NODShiLtJ_T0018584.1 MGP_NODShiLtJ_G0015683.1 mouse_genomes_project 1 2562274 2577624 + MGP_NODShiLtJ_P0018584 Atp6v1h protein_coding protein_coding MGP_NODShiLtJ_T0018585.1 MGP_NODShiLtJ_G0015683.1 mouse_genomes_project 1 2562296 2644711 + MGP_NODShiLtJ_P0018585 Atp6v1h protein_coding protein_coding MGP_NODShiLtJ_T0018586.1 MGP_NODShiLtJ_G0015683.1 mouse_genomes_project 1 2562306 2581743 + Atp6v1h protein_coding retained_intron MGP_NODShiLtJ_T0005955.1 MGP_NODShiLtJ_G0004984.1 mouse_genomes_project 1 209993715 209993869 + Gm38079 lincRNA lincRNA MGP_NODShiLtJ_T0101502.1 MGP_NODShiLtJ_G0039672.1 mouse_genomes_project 1 183480279 183482277 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0023348.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197709616 197759919 + MGP_NODShiLtJ_P0023348 Dcaf8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023349.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197709621 197753388 + Dcaf8 protein_coding retained_intron MGP_NODShiLtJ_T0023350.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197709650 197760631 + MGP_NODShiLtJ_P0023350 Dcaf8 protein_coding protein_coding MGP_NODShiLtJ_T0023351.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197709672 197754615 + Dcaf8 protein_coding retained_intron MGP_NODShiLtJ_T0023352.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197709674 197760590 + MGP_NODShiLtJ_P0023352 Dcaf8 protein_coding protein_coding MGP_NODShiLtJ_T0023353.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197709710 197761513 + MGP_NODShiLtJ_P0023353 Dcaf8 protein_coding protein_coding MGP_NODShiLtJ_T0023354.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197710477 197754615 + Dcaf8 protein_coding retained_intron MGP_NODShiLtJ_T0023355.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197735171 197737465 + Dcaf8 protein_coding retained_intron MGP_NODShiLtJ_T0023356.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197735275 197757389 + MGP_NODShiLtJ_P0023356 Dcaf8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023357.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197742613 197747129 + Dcaf8 protein_coding retained_intron MGP_NODShiLtJ_T0023358.1 MGP_NODShiLtJ_G0016648.1 mouse_genomes_project 1 197752187 197762130 + MGP_NODShiLtJ_P0023358 Dcaf8 protein_coding protein_coding MGP_NODShiLtJ_T0022726.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184587747 184728851 - MGP_NODShiLtJ_P0022726 Rabgap1l protein_coding protein_coding MGP_NODShiLtJ_T0022727.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184594621 184600447 - Rabgap1l protein_coding retained_intron MGP_NODShiLtJ_T0022728.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184595137 184621064 - MGP_NODShiLtJ_P0022728 Rabgap1l protein_coding protein_coding MGP_NODShiLtJ_T0022729.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184595189 184678479 - MGP_NODShiLtJ_P0022729 Rabgap1l protein_coding protein_coding MGP_NODShiLtJ_T0022730.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184595239 184657208 - Rabgap1l protein_coding processed_transcript MGP_NODShiLtJ_T0022731.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184604652 184616345 - Rabgap1l protein_coding retained_intron MGP_NODShiLtJ_T0022732.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184616328 184620379 - Rabgap1l protein_coding processed_transcript MGP_NODShiLtJ_T0022733.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184626191 184680311 - MGP_NODShiLtJ_P0022733 Rabgap1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022734.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184626552 184828933 - MGP_NODShiLtJ_P0022734 Rabgap1l protein_coding protein_coding MGP_NODShiLtJ_T0022735.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184626824 185297709 - MGP_NODShiLtJ_P0022735 Rabgap1l protein_coding protein_coding MGP_NODShiLtJ_T0022736.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184653751 184657395 - Rabgap1l protein_coding processed_transcript MGP_NODShiLtJ_T0022737.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184658474 184664537 - Rabgap1l protein_coding processed_transcript MGP_NODShiLtJ_T0022738.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184661217 184678917 - Rabgap1l protein_coding processed_transcript MGP_NODShiLtJ_T0022739.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 184828665 184846235 - Rabgap1l protein_coding retained_intron MGP_NODShiLtJ_T0022740.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 185147125 185297701 - MGP_NODShiLtJ_P0022740 Rabgap1l protein_coding protein_coding MGP_NODShiLtJ_T0022741.1 MGP_NODShiLtJ_G0016513.1 mouse_genomes_project 1 185220696 185297974 - MGP_NODShiLtJ_P0022741 Rabgap1l protein_coding protein_coding MGP_NODShiLtJ_T0005825.1 MGP_NODShiLtJ_G0004881.1 mouse_genomes_project 1 138785586 138820216 + Celrr lincRNA lincRNA MGP_NODShiLtJ_T0005826.1 MGP_NODShiLtJ_G0004881.1 mouse_genomes_project 1 138785652 138816985 + Celrr lincRNA lincRNA MGP_NODShiLtJ_T0005827.1 MGP_NODShiLtJ_G0004881.1 mouse_genomes_project 1 138785655 138882495 + Celrr lincRNA lincRNA MGP_NODShiLtJ_T0005828.1 MGP_NODShiLtJ_G0004881.1 mouse_genomes_project 1 138785710 138787114 + Celrr lincRNA lincRNA MGP_NODShiLtJ_T0022072.1 MGP_NODShiLtJ_G0016388.1 mouse_genomes_project 1 154555605 154567977 + MGP_NODShiLtJ_P0022072 Ptpn7 protein_coding protein_coding MGP_NODShiLtJ_T0022073.1 MGP_NODShiLtJ_G0016388.1 mouse_genomes_project 1 154555630 154569199 + MGP_NODShiLtJ_P0022073 Ptpn7 protein_coding protein_coding MGP_NODShiLtJ_T0022074.1 MGP_NODShiLtJ_G0016388.1 mouse_genomes_project 1 154556213 154562858 + Ptpn7 protein_coding retained_intron MGP_NODShiLtJ_T0022075.1 MGP_NODShiLtJ_G0016388.1 mouse_genomes_project 1 154556214 154568830 + MGP_NODShiLtJ_P0022075 Ptpn7 protein_coding protein_coding MGP_NODShiLtJ_T0021750.1 MGP_NODShiLtJ_G0016316.1 mouse_genomes_project 1 149848853 149854234 - MGP_NODShiLtJ_P0021750 Il24 protein_coding protein_coding MGP_NODShiLtJ_T0021751.1 MGP_NODShiLtJ_G0016316.1 mouse_genomes_project 1 149848853 149852776 - MGP_NODShiLtJ_P0021751 Il24 protein_coding protein_coding MGP_NODShiLtJ_T0021752.1 MGP_NODShiLtJ_G0016316.1 mouse_genomes_project 1 149849234 149854119 - MGP_NODShiLtJ_P0021752 Il24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021753.1 MGP_NODShiLtJ_G0016316.1 mouse_genomes_project 1 149851566 149854193 - MGP_NODShiLtJ_P0021753 Il24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020749.1 MGP_NODShiLtJ_G0016092.1 mouse_genomes_project 1 94509757 94775413 - MGP_NODShiLtJ_P0020749 Pid1 protein_coding protein_coding MGP_NODShiLtJ_T0020750.1 MGP_NODShiLtJ_G0016092.1 mouse_genomes_project 1 94510692 94838319 - MGP_NODShiLtJ_P0020750 Pid1 protein_coding protein_coding MGP_NODShiLtJ_T0020751.1 MGP_NODShiLtJ_G0016092.1 mouse_genomes_project 1 94511387 94529571 - Pid1 protein_coding processed_transcript MGP_NODShiLtJ_T0020752.1 MGP_NODShiLtJ_G0016092.1 mouse_genomes_project 1 94559754 94775191 - MGP_NODShiLtJ_P0020752 Pid1 protein_coding protein_coding MGP_NODShiLtJ_T0020753.1 MGP_NODShiLtJ_G0016092.1 mouse_genomes_project 1 94593555 94887314 - MGP_NODShiLtJ_P0020753 Pid1 protein_coding protein_coding MGP_NODShiLtJ_T0020754.1 MGP_NODShiLtJ_G0016092.1 mouse_genomes_project 1 94601104 94843537 - MGP_NODShiLtJ_P0020754 Pid1 protein_coding protein_coding MGP_NODShiLtJ_T0020755.1 MGP_NODShiLtJ_G0016092.1 mouse_genomes_project 1 94650828 94775379 - MGP_NODShiLtJ_P0020755 Pid1 protein_coding protein_coding MGP_NODShiLtJ_T0020756.1 MGP_NODShiLtJ_G0016092.1 mouse_genomes_project 1 94773960 94775391 - Pid1 protein_coding retained_intron MGP_NODShiLtJ_T0000354.1 MGP_NODShiLtJ_G0000292.1 mouse_genomes_project 1 2384680 2386795 - TEC TEC MGP_NODShiLtJ_T0098570.1 MGP_NODShiLtJ_G0036964.1 mouse_genomes_project 1 166381575 166381681 - Gm22681 snRNA snRNA MGP_NODShiLtJ_T0002862.1 MGP_NODShiLtJ_G0002693.1 mouse_genomes_project 1 174020454 174068224 + antisense antisense MGP_NODShiLtJ_T0002863.1 MGP_NODShiLtJ_G0002693.1 mouse_genomes_project 1 174020487 174198728 + antisense antisense MGP_NODShiLtJ_T0099745.1 MGP_NODShiLtJ_G0038139.1 mouse_genomes_project 1 24970240 24970377 - Gm26418 snoRNA snoRNA MGP_NODShiLtJ_T0024052.1 MGP_NODShiLtJ_G0016818.1 mouse_genomes_project 1 219590719 219597199 + MGP_NODShiLtJ_P0024052 Slc30a1 protein_coding protein_coding MGP_NODShiLtJ_T0024053.1 MGP_NODShiLtJ_G0016818.1 mouse_genomes_project 1 219591208 219593127 + MGP_NODShiLtJ_P0024053 Slc30a1 protein_coding protein_coding MGP_NODShiLtJ_T0005906.1 MGP_NODShiLtJ_G0004944.1 mouse_genomes_project 1 188410326 188413213 + Gm29500 lincRNA lincRNA MGP_NODShiLtJ_T0002725.1 MGP_NODShiLtJ_G0002589.1 mouse_genomes_project 1 37525480 37530681 - Gm28306 antisense antisense MGP_NODShiLtJ_T0011761.1 MGP_NODShiLtJ_G0009869.1 mouse_genomes_project 1 6973527 6973725 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005776.1 MGP_NODShiLtJ_G0004840.1 mouse_genomes_project 1 102725510 102734158 - Gm26683 lincRNA lincRNA MGP_NODShiLtJ_T0011919.1 MGP_NODShiLtJ_G0010027.1 mouse_genomes_project 1 61839840 61840831 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009467.1 MGP_NODShiLtJ_G0007600.1 mouse_genomes_project 1 204933493 204933614 - Gm27458 miRNA miRNA MGP_NODShiLtJ_T0002781.1 MGP_NODShiLtJ_G0002631.1 mouse_genomes_project 1 82313714 82356903 + 1700027A15Rik antisense antisense MGP_NODShiLtJ_T0002782.1 MGP_NODShiLtJ_G0002631.1 mouse_genomes_project 1 82348627 82357686 + 1700027A15Rik antisense antisense MGP_NODShiLtJ_T0002783.1 MGP_NODShiLtJ_G0002631.1 mouse_genomes_project 1 82348972 82357677 + 1700027A15Rik antisense antisense MGP_NODShiLtJ_T0002784.1 MGP_NODShiLtJ_G0002631.1 mouse_genomes_project 1 82354781 82357678 + 1700027A15Rik antisense antisense MGP_NODShiLtJ_T0002785.1 MGP_NODShiLtJ_G0002631.1 mouse_genomes_project 1 82356747 82357686 + 1700027A15Rik antisense antisense MGP_NODShiLtJ_T0020350.1 MGP_NODShiLtJ_G0016022.1 mouse_genomes_project 1 84056633 84060476 + MGP_NODShiLtJ_P0020350 Bcs1l protein_coding protein_coding MGP_NODShiLtJ_T0020351.1 MGP_NODShiLtJ_G0016022.1 mouse_genomes_project 1 84056644 84060824 + MGP_NODShiLtJ_P0020351 Bcs1l protein_coding protein_coding MGP_NODShiLtJ_T0020352.1 MGP_NODShiLtJ_G0016022.1 mouse_genomes_project 1 84056718 84060541 + MGP_NODShiLtJ_P0020352 Bcs1l protein_coding protein_coding MGP_NODShiLtJ_T0020353.1 MGP_NODShiLtJ_G0016022.1 mouse_genomes_project 1 84058617 84059260 + Bcs1l protein_coding retained_intron MGP_NODShiLtJ_T0020565.1 MGP_NODShiLtJ_G0016054.1 mouse_genomes_project 1 84891417 84918365 + MGP_NODShiLtJ_P0020565 Asic4 protein_coding protein_coding MGP_NODShiLtJ_T0020566.1 MGP_NODShiLtJ_G0016054.1 mouse_genomes_project 1 84891680 84918368 + MGP_NODShiLtJ_P0020566 Asic4 protein_coding protein_coding MGP_NODShiLtJ_T0022522.1 MGP_NODShiLtJ_G0016480.1 mouse_genomes_project 1 178967002 178986448 - MGP_NODShiLtJ_P0022522 Mr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022523.1 MGP_NODShiLtJ_G0016480.1 mouse_genomes_project 1 178967599 178973744 - Mr1 protein_coding retained_intron MGP_NODShiLtJ_T0022524.1 MGP_NODShiLtJ_G0016480.1 mouse_genomes_project 1 178967603 178986427 - MGP_NODShiLtJ_P0022524 Mr1 protein_coding protein_coding MGP_NODShiLtJ_T0022525.1 MGP_NODShiLtJ_G0016480.1 mouse_genomes_project 1 178968556 178986448 - MGP_NODShiLtJ_P0022525 Mr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022526.1 MGP_NODShiLtJ_G0016480.1 mouse_genomes_project 1 178975509 178986458 - Mr1 protein_coding retained_intron MGP_NODShiLtJ_T0023105.1 MGP_NODShiLtJ_G0016593.1 mouse_genomes_project 1 195269528 195343337 - MGP_NODShiLtJ_P0023105 Ddr2 protein_coding protein_coding MGP_NODShiLtJ_T0023106.1 MGP_NODShiLtJ_G0016593.1 mouse_genomes_project 1 195297728 195424275 - MGP_NODShiLtJ_P0023106 Ddr2 protein_coding protein_coding MGP_NODShiLtJ_T0023107.1 MGP_NODShiLtJ_G0016593.1 mouse_genomes_project 1 195343116 195424308 - Ddr2 protein_coding retained_intron MGP_NODShiLtJ_T0023108.1 MGP_NODShiLtJ_G0016593.1 mouse_genomes_project 1 195396501 195416536 - Ddr2 protein_coding processed_transcript MGP_NODShiLtJ_T0023474.1 MGP_NODShiLtJ_G0016693.1 mouse_genomes_project 1 200108430 200109354 - MGP_NODShiLtJ_P0023474 Olfr231 protein_coding protein_coding MGP_NODShiLtJ_T0021604.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143785643 143833860 - MGP_NODShiLtJ_P0021604 Actr3 protein_coding protein_coding MGP_NODShiLtJ_T0021605.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143785644 143833680 - MGP_NODShiLtJ_P0021605 Actr3 protein_coding protein_coding MGP_NODShiLtJ_T0021606.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143788040 143793773 - Actr3 protein_coding retained_intron MGP_NODShiLtJ_T0021607.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143788446 143833614 - MGP_NODShiLtJ_P0021607 Actr3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021608.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143792649 143794477 - Actr3 protein_coding retained_intron MGP_NODShiLtJ_T0021609.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143802025 143805106 - Actr3 protein_coding retained_intron MGP_NODShiLtJ_T0021610.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143802044 143833860 - MGP_NODShiLtJ_P0021610 Actr3 protein_coding protein_coding MGP_NODShiLtJ_T0021611.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143802074 143832809 - MGP_NODShiLtJ_P0021611 Actr3 protein_coding protein_coding MGP_NODShiLtJ_T0021612.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143803456 143833587 - MGP_NODShiLtJ_P0021612 Actr3 protein_coding protein_coding MGP_NODShiLtJ_T0021613.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143803513 143833840 - MGP_NODShiLtJ_P0021613 Actr3 protein_coding protein_coding MGP_NODShiLtJ_T0021614.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143803522 143833603 - MGP_NODShiLtJ_P0021614 Actr3 protein_coding protein_coding MGP_NODShiLtJ_T0021615.1 MGP_NODShiLtJ_G0016286.1 mouse_genomes_project 1 143814219 143833561 - Actr3 protein_coding retained_intron MGP_NODShiLtJ_T0012242.1 MGP_NODShiLtJ_G0010350.1 mouse_genomes_project 1 216252391 216253554 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023905.1 MGP_NODShiLtJ_G0016791.1 mouse_genomes_project 1 214318424 214492527 - MGP_NODShiLtJ_P0023905 Spata17 protein_coding protein_coding MGP_NODShiLtJ_T0023906.1 MGP_NODShiLtJ_G0016791.1 mouse_genomes_project 1 214322191 214492508 - MGP_NODShiLtJ_P0023906 Spata17 protein_coding protein_coding MGP_NODShiLtJ_T0023907.1 MGP_NODShiLtJ_G0016791.1 mouse_genomes_project 1 214377834 214414794 - MGP_NODShiLtJ_P0023907 Spata17 protein_coding protein_coding MGP_NODShiLtJ_T0023908.1 MGP_NODShiLtJ_G0016791.1 mouse_genomes_project 1 214382626 214492499 - MGP_NODShiLtJ_P0023908 Spata17 protein_coding protein_coding MGP_NODShiLtJ_T0023909.1 MGP_NODShiLtJ_G0016791.1 mouse_genomes_project 1 214402639 214414987 - MGP_NODShiLtJ_P0023909 Spata17 protein_coding protein_coding MGP_NODShiLtJ_T0023910.1 MGP_NODShiLtJ_G0016791.1 mouse_genomes_project 1 214402639 214492483 - MGP_NODShiLtJ_P0023910 Spata17 protein_coding protein_coding MGP_NODShiLtJ_T0023911.1 MGP_NODShiLtJ_G0016791.1 mouse_genomes_project 1 214402646 214414974 - Spata17 protein_coding processed_transcript MGP_NODShiLtJ_T0023912.1 MGP_NODShiLtJ_G0016791.1 mouse_genomes_project 1 214461648 214492508 - Spata17 protein_coding processed_transcript MGP_NODShiLtJ_T0005978.1 MGP_NODShiLtJ_G0005001.1 mouse_genomes_project 1 213740955 213790898 - A730004F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0005979.1 MGP_NODShiLtJ_G0005001.1 mouse_genomes_project 1 213740999 213791107 - A730004F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0021351.1 MGP_NODShiLtJ_G0016229.1 mouse_genomes_project 1 109688690 109799344 - MGP_NODShiLtJ_P0021351 protein_coding protein_coding MGP_NODShiLtJ_T0020450.1 MGP_NODShiLtJ_G0016042.1 mouse_genomes_project 1 84622586 84625333 + Ankzf1 protein_coding retained_intron MGP_NODShiLtJ_T0020451.1 MGP_NODShiLtJ_G0016042.1 mouse_genomes_project 1 84622595 84625783 + Ankzf1 protein_coding retained_intron MGP_NODShiLtJ_T0020452.1 MGP_NODShiLtJ_G0016042.1 mouse_genomes_project 1 84622595 84629636 + Ankzf1 protein_coding retained_intron MGP_NODShiLtJ_T0020453.1 MGP_NODShiLtJ_G0016042.1 mouse_genomes_project 1 84622595 84629636 + Ankzf1 protein_coding retained_intron MGP_NODShiLtJ_T0020454.1 MGP_NODShiLtJ_G0016042.1 mouse_genomes_project 1 84622595 84629636 + MGP_NODShiLtJ_P0020454 Ankzf1 protein_coding protein_coding MGP_NODShiLtJ_T0020455.1 MGP_NODShiLtJ_G0016042.1 mouse_genomes_project 1 84622595 84629636 + MGP_NODShiLtJ_P0020455 Ankzf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020456.1 MGP_NODShiLtJ_G0016042.1 mouse_genomes_project 1 84622627 84625783 + MGP_NODShiLtJ_P0020456 Ankzf1 protein_coding protein_coding MGP_NODShiLtJ_T0020457.1 MGP_NODShiLtJ_G0016042.1 mouse_genomes_project 1 84625941 84626905 + Ankzf1 protein_coding retained_intron MGP_NODShiLtJ_T0018770.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13079213 13229279 - MGP_NODShiLtJ_P0018770 Eya1 protein_coding protein_coding MGP_NODShiLtJ_T0018771.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13079217 13229314 - MGP_NODShiLtJ_P0018771 Eya1 protein_coding protein_coding MGP_NODShiLtJ_T0018772.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13079925 13229198 - MGP_NODShiLtJ_P0018772 Eya1 protein_coding protein_coding MGP_NODShiLtJ_T0018773.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13080902 13223627 - MGP_NODShiLtJ_P0018773 Eya1 protein_coding protein_coding MGP_NODShiLtJ_T0018774.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13121656 13145816 - MGP_NODShiLtJ_P0018774 Eya1 protein_coding protein_coding MGP_NODShiLtJ_T0018775.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13170900 13223676 - MGP_NODShiLtJ_P0018775 Eya1 protein_coding protein_coding MGP_NODShiLtJ_T0018776.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13189367 13223685 - MGP_NODShiLtJ_P0018776 Eya1 protein_coding protein_coding MGP_NODShiLtJ_T0018777.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13189435 13228915 - MGP_NODShiLtJ_P0018777 Eya1 protein_coding protein_coding MGP_NODShiLtJ_T0018778.1 MGP_NODShiLtJ_G0015713.1 mouse_genomes_project 1 13220267 13229130 - Eya1 protein_coding retained_intron MGP_NODShiLtJ_T0005838.1 MGP_NODShiLtJ_G0004890.1 mouse_genomes_project 1 149289103 149296452 - Gm15675 lincRNA lincRNA MGP_NODShiLtJ_T0002821.1 MGP_NODShiLtJ_G0002662.1 mouse_genomes_project 1 121129521 121146557 + D630008O14Rik antisense antisense MGP_NODShiLtJ_T0002822.1 MGP_NODShiLtJ_G0002662.1 mouse_genomes_project 1 121129521 121164452 + D630008O14Rik antisense antisense MGP_NODShiLtJ_T0005660.1 MGP_NODShiLtJ_G0004750.1 mouse_genomes_project 1 54751870 54856856 + lincRNA lincRNA MGP_NODShiLtJ_T0005661.1 MGP_NODShiLtJ_G0004750.1 mouse_genomes_project 1 54751870 54854702 + lincRNA lincRNA MGP_NODShiLtJ_T0020611.1 MGP_NODShiLtJ_G0016061.1 mouse_genomes_project 1 86997532 87151351 - MGP_NODShiLtJ_P0020611 Epha4 protein_coding protein_coding MGP_NODShiLtJ_T0020612.1 MGP_NODShiLtJ_G0016061.1 mouse_genomes_project 1 86997536 87151342 - MGP_NODShiLtJ_P0020612 Epha4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020613.1 MGP_NODShiLtJ_G0016061.1 mouse_genomes_project 1 87003476 87151351 - MGP_NODShiLtJ_P0020613 Epha4 protein_coding protein_coding MGP_NODShiLtJ_T0020614.1 MGP_NODShiLtJ_G0016061.1 mouse_genomes_project 1 87003955 87007919 - MGP_NODShiLtJ_P0020614 Epha4 protein_coding protein_coding MGP_NODShiLtJ_T0020615.1 MGP_NODShiLtJ_G0016061.1 mouse_genomes_project 1 87003973 87151342 - MGP_NODShiLtJ_P0020615 Epha4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020616.1 MGP_NODShiLtJ_G0016061.1 mouse_genomes_project 1 87030736 87151348 - Epha4 protein_coding retained_intron MGP_NODShiLtJ_T0020617.1 MGP_NODShiLtJ_G0016061.1 mouse_genomes_project 1 87035072 87151346 - MGP_NODShiLtJ_P0020617 Epha4 protein_coding protein_coding MGP_NODShiLtJ_T0023123.1 MGP_NODShiLtJ_G0016599.1 mouse_genomes_project 1 195633778 195658897 - Nos1ap protein_coding processed_transcript MGP_NODShiLtJ_T0023125.1 MGP_NODShiLtJ_G0016599.1 mouse_genomes_project 1 195648726 195956822 - MGP_NODShiLtJ_P0023125 Nos1ap protein_coding protein_coding MGP_NODShiLtJ_T0023126.1 MGP_NODShiLtJ_G0016599.1 mouse_genomes_project 1 195648766 195652049 - Nos1ap protein_coding retained_intron MGP_NODShiLtJ_T0023127.1 MGP_NODShiLtJ_G0016599.1 mouse_genomes_project 1 195649979 195655607 - Nos1ap protein_coding processed_transcript MGP_NODShiLtJ_T0023128.1 MGP_NODShiLtJ_G0016599.1 mouse_genomes_project 1 195658709 195956325 - MGP_NODShiLtJ_P0023128 Nos1ap protein_coding protein_coding MGP_NODShiLtJ_T0023129.1 MGP_NODShiLtJ_G0016599.1 mouse_genomes_project 1 195658855 195956258 - MGP_NODShiLtJ_P0023129 Nos1ap protein_coding protein_coding MGP_NODShiLtJ_T0023130.1 MGP_NODShiLtJ_G0016599.1 mouse_genomes_project 1 195669335 195811474 - Nos1ap protein_coding processed_transcript MGP_NODShiLtJ_T0023131.1 MGP_NODShiLtJ_G0016599.1 mouse_genomes_project 1 195711488 195956810 - Nos1ap protein_coding retained_intron MGP_NODShiLtJ_T0097859.1 MGP_NODShiLtJ_G0036271.1 mouse_genomes_project 1 86751871 86751965 + Gm25974 rRNA rRNA MGP_NODShiLtJ_T0023292.1 MGP_NODShiLtJ_G0016635.1 mouse_genomes_project 1 197105894 197144721 + MGP_NODShiLtJ_P0023292 Cd244 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023293.1 MGP_NODShiLtJ_G0016635.1 mouse_genomes_project 1 197105894 197119614 + MGP_NODShiLtJ_P0023293 Cd244 protein_coding protein_coding MGP_NODShiLtJ_T0023294.1 MGP_NODShiLtJ_G0016635.1 mouse_genomes_project 1 197111828 197119614 + Cd244 protein_coding retained_intron MGP_NODShiLtJ_T0021656.1 MGP_NODShiLtJ_G0016295.1 mouse_genomes_project 1 146412358 146437150 - MGP_NODShiLtJ_P0021656 Map3k19 protein_coding protein_coding MGP_NODShiLtJ_T0021657.1 MGP_NODShiLtJ_G0016295.1 mouse_genomes_project 1 146412367 146437150 - MGP_NODShiLtJ_P0021657 Map3k19 protein_coding protein_coding MGP_NODShiLtJ_T0021658.1 MGP_NODShiLtJ_G0016295.1 mouse_genomes_project 1 146412367 146437150 - MGP_NODShiLtJ_P0021658 Map3k19 protein_coding protein_coding MGP_NODShiLtJ_T0021659.1 MGP_NODShiLtJ_G0016295.1 mouse_genomes_project 1 146412376 146437150 - MGP_NODShiLtJ_P0021659 Map3k19 protein_coding protein_coding MGP_NODShiLtJ_T0021660.1 MGP_NODShiLtJ_G0016295.1 mouse_genomes_project 1 146412376 146451856 - MGP_NODShiLtJ_P0021660 Map3k19 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000665.1 MGP_NODShiLtJ_G0000599.1 mouse_genomes_project 1 176556363 176556801 + TEC TEC MGP_NODShiLtJ_T0018990.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36756222 36761152 + Rab23 protein_coding processed_transcript MGP_NODShiLtJ_T0018991.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36756222 36764206 + Rab23 protein_coding retained_intron MGP_NODShiLtJ_T0018992.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36756230 36783192 + MGP_NODShiLtJ_P0018992 Rab23 protein_coding protein_coding MGP_NODShiLtJ_T0018993.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36756244 36783185 + MGP_NODShiLtJ_P0018993 Rab23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018994.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36756245 36762791 + Rab23 protein_coding retained_intron MGP_NODShiLtJ_T0018995.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36756473 36773812 + Rab23 protein_coding retained_intron MGP_NODShiLtJ_T0018996.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36756742 36783189 + MGP_NODShiLtJ_P0018996 Rab23 protein_coding protein_coding MGP_NODShiLtJ_T0018997.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36772985 36781339 + Rab23 protein_coding retained_intron MGP_NODShiLtJ_T0018998.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36776080 36779998 + Rab23 protein_coding retained_intron MGP_NODShiLtJ_T0018999.1 MGP_NODShiLtJ_G0015768.1 mouse_genomes_project 1 36778764 36781400 + Rab23 protein_coding retained_intron MGP_NODShiLtJ_T0097873.1 MGP_NODShiLtJ_G0036285.1 mouse_genomes_project 1 186139609 186139727 - Gm25488 rRNA rRNA MGP_NODShiLtJ_T0002836.1 MGP_NODShiLtJ_G0002672.1 mouse_genomes_project 1 150259282 150260329 + Gm28914 antisense antisense MGP_NODShiLtJ_T0000366.1 MGP_NODShiLtJ_G0000304.1 mouse_genomes_project 1 8907867 8910612 - TEC TEC MGP_NODShiLtJ_T0005788.1 MGP_NODShiLtJ_G0004852.1 mouse_genomes_project 1 109031619 109046628 - Gm29601 lincRNA lincRNA MGP_NODShiLtJ_T0022670.1 MGP_NODShiLtJ_G0016503.1 mouse_genomes_project 1 181598906 181665053 + MGP_NODShiLtJ_P0022670 Sec16b protein_coding protein_coding MGP_NODShiLtJ_T0022671.1 MGP_NODShiLtJ_G0016503.1 mouse_genomes_project 1 181598988 181665056 + MGP_NODShiLtJ_P0022671 Sec16b protein_coding protein_coding MGP_NODShiLtJ_T0022672.1 MGP_NODShiLtJ_G0016503.1 mouse_genomes_project 1 181618353 181665053 + MGP_NODShiLtJ_P0022672 Sec16b protein_coding protein_coding MGP_NODShiLtJ_T0022673.1 MGP_NODShiLtJ_G0016503.1 mouse_genomes_project 1 181627274 181657716 + MGP_NODShiLtJ_P0022673 Sec16b protein_coding protein_coding MGP_NODShiLtJ_T0022674.1 MGP_NODShiLtJ_G0016503.1 mouse_genomes_project 1 181632191 181638558 + Sec16b protein_coding retained_intron MGP_NODShiLtJ_T0002747.1 MGP_NODShiLtJ_G0002606.1 mouse_genomes_project 1 44336687 44342980 - Gm37623 antisense antisense MGP_NODShiLtJ_T0005775.1 MGP_NODShiLtJ_G0004839.1 mouse_genomes_project 1 102383899 102384701 - Gm28199 lincRNA lincRNA MGP_NODShiLtJ_T0099818.1 MGP_NODShiLtJ_G0038212.1 mouse_genomes_project 1 185591016 185591093 + Snord47 snoRNA snoRNA MGP_NODShiLtJ_T0018587.1 MGP_NODShiLtJ_G0015684.1 mouse_genomes_project 1 3125960 3128810 + Oprk1 protein_coding retained_intron MGP_NODShiLtJ_T0018588.1 MGP_NODShiLtJ_G0015684.1 mouse_genomes_project 1 3125987 3143697 + MGP_NODShiLtJ_P0018588 Oprk1 protein_coding protein_coding MGP_NODShiLtJ_T0018589.1 MGP_NODShiLtJ_G0015684.1 mouse_genomes_project 1 3126051 3140432 + MGP_NODShiLtJ_P0018589 Oprk1 protein_coding protein_coding MGP_NODShiLtJ_T0018590.1 MGP_NODShiLtJ_G0015684.1 mouse_genomes_project 1 3126435 3141580 + MGP_NODShiLtJ_P0018590 Oprk1 protein_coding protein_coding MGP_NODShiLtJ_T0018591.1 MGP_NODShiLtJ_G0015684.1 mouse_genomes_project 1 3134000 3140719 + Oprk1 protein_coding retained_intron MGP_NODShiLtJ_T0022341.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173742519 173776510 - MGP_NODShiLtJ_P0022341 BC003331 protein_coding protein_coding MGP_NODShiLtJ_T0022342.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173742524 173776485 - MGP_NODShiLtJ_P0022342 BC003331 protein_coding protein_coding MGP_NODShiLtJ_T0022343.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173742524 173776192 - MGP_NODShiLtJ_P0022343 BC003331 protein_coding protein_coding MGP_NODShiLtJ_T0022344.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173743518 173776149 - MGP_NODShiLtJ_P0022344 BC003331 protein_coding protein_coding MGP_NODShiLtJ_T0022345.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173743528 173776173 - MGP_NODShiLtJ_P0022345 BC003331 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022346.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173757878 173765904 - BC003331 protein_coding retained_intron MGP_NODShiLtJ_T0022347.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173758606 173776367 - BC003331 protein_coding processed_transcript MGP_NODShiLtJ_T0022348.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173767711 173776178 - BC003331 protein_coding retained_intron MGP_NODShiLtJ_T0022349.1 MGP_NODShiLtJ_G0016446.1 mouse_genomes_project 1 173771440 173776177 - BC003331 protein_coding retained_intron MGP_NODShiLtJ_T0101024.1 MGP_NODShiLtJ_G0039404.1 mouse_genomes_project 1 210201799 210203174 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101025.1 MGP_NODShiLtJ_G0039404.1 mouse_genomes_project 1 210202184 210203033 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0009380.1 MGP_NODShiLtJ_G0007513.1 mouse_genomes_project 1 20557560 20557679 + Mir133b miRNA miRNA MGP_NODShiLtJ_T0005832.1 MGP_NODShiLtJ_G0004885.1 mouse_genomes_project 1 142820265 143204178 - lincRNA lincRNA MGP_NODShiLtJ_T0005807.1 MGP_NODShiLtJ_G0004866.1 mouse_genomes_project 1 127523038 127586544 - Gm29088 lincRNA lincRNA MGP_NODShiLtJ_T0005603.1 MGP_NODShiLtJ_G0004711.1 mouse_genomes_project 1 23588376 23588775 + Gm27028 lincRNA lincRNA MGP_NODShiLtJ_T0000598.1 MGP_NODShiLtJ_G0000534.1 mouse_genomes_project 1 146696985 146700866 - TEC TEC MGP_NODShiLtJ_T0012141.1 MGP_NODShiLtJ_G0010249.1 mouse_genomes_project 1 163761959 163764983 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016892.1 MGP_NODShiLtJ_G0014976.1 mouse_genomes_project 1 98952703 99343983 - processed_transcript processed_transcript MGP_NODShiLtJ_T0000681.1 MGP_NODShiLtJ_G0000615.1 mouse_genomes_project 1 181434338 181435515 - TEC TEC MGP_NODShiLtJ_T0000484.1 MGP_NODShiLtJ_G0000420.1 mouse_genomes_project 1 69764987 69767505 + TEC TEC MGP_NODShiLtJ_T0020328.1 MGP_NODShiLtJ_G0016019.1 mouse_genomes_project 1 83970818 83996313 + MGP_NODShiLtJ_P0020328 Cnot9 protein_coding protein_coding MGP_NODShiLtJ_T0020329.1 MGP_NODShiLtJ_G0016019.1 mouse_genomes_project 1 83970820 83991750 + Cnot9 protein_coding processed_transcript MGP_NODShiLtJ_T0020330.1 MGP_NODShiLtJ_G0016019.1 mouse_genomes_project 1 83988189 83993648 + Cnot9 protein_coding retained_intron MGP_NODShiLtJ_T0023609.1 MGP_NODShiLtJ_G0016729.1 mouse_genomes_project 1 206236747 206319547 + MGP_NODShiLtJ_P0023609 Cnst protein_coding protein_coding MGP_NODShiLtJ_T0023610.1 MGP_NODShiLtJ_G0016729.1 mouse_genomes_project 1 206236876 206275987 + Cnst protein_coding retained_intron MGP_NODShiLtJ_T0023611.1 MGP_NODShiLtJ_G0016729.1 mouse_genomes_project 1 206236886 206295139 + Cnst protein_coding retained_intron MGP_NODShiLtJ_T0023612.1 MGP_NODShiLtJ_G0016729.1 mouse_genomes_project 1 206286438 206297443 + Cnst protein_coding processed_transcript MGP_NODShiLtJ_T0021298.1 MGP_NODShiLtJ_G0016214.1 mouse_genomes_project 1 105171766 105189119 - MGP_NODShiLtJ_P0021298 Stk25 protein_coding protein_coding MGP_NODShiLtJ_T0021299.1 MGP_NODShiLtJ_G0016214.1 mouse_genomes_project 1 105173915 105189026 - Stk25 protein_coding retained_intron MGP_NODShiLtJ_T0021300.1 MGP_NODShiLtJ_G0016214.1 mouse_genomes_project 1 105174372 105177375 - Stk25 protein_coding retained_intron MGP_NODShiLtJ_T0021301.1 MGP_NODShiLtJ_G0016214.1 mouse_genomes_project 1 105175409 105177802 - Stk25 protein_coding retained_intron MGP_NODShiLtJ_T0021302.1 MGP_NODShiLtJ_G0016214.1 mouse_genomes_project 1 105177863 105188876 - MGP_NODShiLtJ_P0021302 Stk25 protein_coding protein_coding MGP_NODShiLtJ_T0021303.1 MGP_NODShiLtJ_G0016214.1 mouse_genomes_project 1 105179142 105216017 - MGP_NODShiLtJ_P0021303 Stk25 protein_coding protein_coding MGP_NODShiLtJ_T0023880.1 MGP_NODShiLtJ_G0016784.1 mouse_genomes_project 1 212457498 212490014 + MGP_NODShiLtJ_P0023880 Bpnt1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023881.1 MGP_NODShiLtJ_G0016784.1 mouse_genomes_project 1 212457501 212488653 + MGP_NODShiLtJ_P0023881 Bpnt1 protein_coding protein_coding MGP_NODShiLtJ_T0023882.1 MGP_NODShiLtJ_G0016784.1 mouse_genomes_project 1 212457525 212472064 + MGP_NODShiLtJ_P0023882 Bpnt1 protein_coding protein_coding MGP_NODShiLtJ_T0023883.1 MGP_NODShiLtJ_G0016784.1 mouse_genomes_project 1 212457559 212473496 + Bpnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0023312.1 MGP_NODShiLtJ_G0016642.1 mouse_genomes_project 1 197461220 197497812 + MGP_NODShiLtJ_P0023312 Slamf6 protein_coding protein_coding MGP_NODShiLtJ_T0023313.1 MGP_NODShiLtJ_G0016642.1 mouse_genomes_project 1 197461242 197487263 + MGP_NODShiLtJ_P0023313 Slamf6 protein_coding protein_coding MGP_NODShiLtJ_T0023314.1 MGP_NODShiLtJ_G0016642.1 mouse_genomes_project 1 197461387 197462384 + Slamf6 protein_coding retained_intron MGP_NODShiLtJ_T0023315.1 MGP_NODShiLtJ_G0016642.1 mouse_genomes_project 1 197461413 197492497 + MGP_NODShiLtJ_P0023315 Slamf6 protein_coding protein_coding MGP_NODShiLtJ_T0023316.1 MGP_NODShiLtJ_G0016642.1 mouse_genomes_project 1 197463195 197477600 + MGP_NODShiLtJ_P0023316 Slamf6 protein_coding protein_coding MGP_NODShiLtJ_T0023317.1 MGP_NODShiLtJ_G0016642.1 mouse_genomes_project 1 197475017 197477937 + Slamf6 protein_coding retained_intron MGP_NODShiLtJ_T0023318.1 MGP_NODShiLtJ_G0016642.1 mouse_genomes_project 1 197485979 197493292 + Slamf6 protein_coding processed_transcript MGP_NODShiLtJ_T0000593.1 MGP_NODShiLtJ_G0000529.1 mouse_genomes_project 1 144810107 144811148 - TEC TEC MGP_NODShiLtJ_T0012142.1 MGP_NODShiLtJ_G0010250.1 mouse_genomes_project 1 164298304 164299574 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097855.1 MGP_NODShiLtJ_G0036267.1 mouse_genomes_project 1 27994254 27994373 - n-R5s209 rRNA rRNA MGP_NODShiLtJ_T0019412.1 MGP_NODShiLtJ_G0015848.1 mouse_genomes_project 1 47766419 47851018 - MGP_NODShiLtJ_P0019412 Uxs1 protein_coding protein_coding MGP_NODShiLtJ_T0019413.1 MGP_NODShiLtJ_G0015848.1 mouse_genomes_project 1 47769089 47850959 - MGP_NODShiLtJ_P0019413 Uxs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019414.1 MGP_NODShiLtJ_G0015848.1 mouse_genomes_project 1 47784548 47851018 - MGP_NODShiLtJ_P0019414 Uxs1 protein_coding protein_coding MGP_NODShiLtJ_T0019415.1 MGP_NODShiLtJ_G0015848.1 mouse_genomes_project 1 47791296 47850239 - Uxs1 protein_coding processed_transcript MGP_NODShiLtJ_T0019416.1 MGP_NODShiLtJ_G0015848.1 mouse_genomes_project 1 47791296 47850968 - MGP_NODShiLtJ_P0019416 Uxs1 protein_coding protein_coding MGP_NODShiLtJ_T0019417.1 MGP_NODShiLtJ_G0015848.1 mouse_genomes_project 1 47794432 47850980 - Uxs1 protein_coding processed_transcript MGP_NODShiLtJ_T0019418.1 MGP_NODShiLtJ_G0015848.1 mouse_genomes_project 1 47798579 47850980 - MGP_NODShiLtJ_P0019418 Uxs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019419.1 MGP_NODShiLtJ_G0015848.1 mouse_genomes_project 1 47809031 47850992 - MGP_NODShiLtJ_P0019419 Uxs1 protein_coding protein_coding MGP_NODShiLtJ_T0009420.1 MGP_NODShiLtJ_G0007553.1 mouse_genomes_project 1 95231377 95231454 + Mir5126 miRNA miRNA MGP_NODShiLtJ_T0002889.1 MGP_NODShiLtJ_G0002713.1 mouse_genomes_project 1 188059347 188066037 + Gm20471 antisense antisense MGP_NODShiLtJ_T0101518.1 MGP_NODShiLtJ_G0039688.1 mouse_genomes_project 1 203155574 203155734 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012256.1 MGP_NODShiLtJ_G0010364.1 mouse_genomes_project 1 221232770 221233173 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011915.1 MGP_NODShiLtJ_G0010023.1 mouse_genomes_project 1 59672173 59672746 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002801.1 MGP_NODShiLtJ_G0002646.1 mouse_genomes_project 1 98109340 98110034 - Efhd1os antisense antisense MGP_NODShiLtJ_T0002957.1 MGP_NODShiLtJ_G0002766.1 mouse_genomes_project 1 220911052 220916158 + Gm15872 antisense antisense MGP_NODShiLtJ_T0020721.1 MGP_NODShiLtJ_G0016085.1 mouse_genomes_project 1 93087439 93099302 - MGP_NODShiLtJ_P0020721 Tm4sf20 protein_coding protein_coding MGP_NODShiLtJ_T0020722.1 MGP_NODShiLtJ_G0016085.1 mouse_genomes_project 1 93088199 93099302 - Tm4sf20 protein_coding processed_transcript MGP_NODShiLtJ_T0023430.1 MGP_NODShiLtJ_G0016672.1 mouse_genomes_project 1 198918277 198927449 - MGP_NODShiLtJ_P0023430 Fcer1a protein_coding protein_coding MGP_NODShiLtJ_T0000566.1 MGP_NODShiLtJ_G0000502.1 mouse_genomes_project 1 119355705 119358688 + TEC TEC MGP_NODShiLtJ_T0016889.1 MGP_NODShiLtJ_G0014975.1 mouse_genomes_project 1 97048281 97056672 + C130036L24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0016890.1 MGP_NODShiLtJ_G0014975.1 mouse_genomes_project 1 97048291 97063217 + C130036L24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016891.1 MGP_NODShiLtJ_G0014975.1 mouse_genomes_project 1 97048295 97051480 + C130036L24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0098586.1 MGP_NODShiLtJ_G0036980.1 mouse_genomes_project 1 202005876 202006052 + Gm25560 snRNA snRNA MGP_NODShiLtJ_T0012025.1 MGP_NODShiLtJ_G0010133.1 mouse_genomes_project 1 104511201 104514578 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000448.1 MGP_NODShiLtJ_G0000384.1 mouse_genomes_project 1 44215613 44219521 - TEC TEC MGP_NODShiLtJ_T0005757.1 MGP_NODShiLtJ_G0004822.1 mouse_genomes_project 1 96633169 96647520 - Gm28100 lincRNA lincRNA MGP_NODShiLtJ_T0098578.1 MGP_NODShiLtJ_G0036972.1 mouse_genomes_project 1 195057125 195057232 - Gm22114 snRNA snRNA MGP_NODShiLtJ_T0012250.1 MGP_NODShiLtJ_G0010358.1 mouse_genomes_project 1 219133671 219134206 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005989.1 MGP_NODShiLtJ_G0005010.1 mouse_genomes_project 1 218763239 218764597 + Gm38161 lincRNA lincRNA MGP_NODShiLtJ_T0000444.1 MGP_NODShiLtJ_G0000380.1 mouse_genomes_project 1 42496830 42498468 + TEC TEC MGP_NODShiLtJ_T0018747.1 MGP_NODShiLtJ_G0015707.1 mouse_genomes_project 1 11651006 11792313 - MGP_NODShiLtJ_P0018747 Slco5a1 protein_coding protein_coding MGP_NODShiLtJ_T0018748.1 MGP_NODShiLtJ_G0015707.1 mouse_genomes_project 1 11664169 11790636 - MGP_NODShiLtJ_P0018748 Slco5a1 protein_coding protein_coding MGP_NODShiLtJ_T0018749.1 MGP_NODShiLtJ_G0015707.1 mouse_genomes_project 1 11664169 11790636 - MGP_NODShiLtJ_P0018749 Slco5a1 protein_coding protein_coding MGP_NODShiLtJ_T0018750.1 MGP_NODShiLtJ_G0015707.1 mouse_genomes_project 1 11665811 11717394 - Slco5a1 protein_coding processed_transcript MGP_NODShiLtJ_T0018751.1 MGP_NODShiLtJ_G0015707.1 mouse_genomes_project 1 11771362 11790899 - Slco5a1 protein_coding processed_transcript MGP_NODShiLtJ_T0020723.1 MGP_NODShiLtJ_G0016086.1 mouse_genomes_project 1 93176587 93241795 + MGP_NODShiLtJ_P0020723 Agfg1 protein_coding protein_coding MGP_NODShiLtJ_T0020724.1 MGP_NODShiLtJ_G0016086.1 mouse_genomes_project 1 93176601 93236994 + MGP_NODShiLtJ_P0020724 Agfg1 protein_coding protein_coding MGP_NODShiLtJ_T0020725.1 MGP_NODShiLtJ_G0016086.1 mouse_genomes_project 1 93176780 93236994 + MGP_NODShiLtJ_P0020725 Agfg1 protein_coding protein_coding MGP_NODShiLtJ_T0020726.1 MGP_NODShiLtJ_G0016086.1 mouse_genomes_project 1 93176782 93236892 + MGP_NODShiLtJ_P0020726 Agfg1 protein_coding protein_coding MGP_NODShiLtJ_T0020727.1 MGP_NODShiLtJ_G0016086.1 mouse_genomes_project 1 93176785 93236134 + MGP_NODShiLtJ_P0020727 Agfg1 protein_coding protein_coding MGP_NODShiLtJ_T0020728.1 MGP_NODShiLtJ_G0016086.1 mouse_genomes_project 1 93176785 93236288 + MGP_NODShiLtJ_P0020728 Agfg1 protein_coding protein_coding MGP_NODShiLtJ_T0020729.1 MGP_NODShiLtJ_G0016086.1 mouse_genomes_project 1 93176845 93235735 + MGP_NODShiLtJ_P0020729 Agfg1 protein_coding protein_coding MGP_NODShiLtJ_T0020730.1 MGP_NODShiLtJ_G0016086.1 mouse_genomes_project 1 93177184 93219339 + MGP_NODShiLtJ_P0020730 Agfg1 protein_coding protein_coding MGP_NODShiLtJ_T0023867.1 MGP_NODShiLtJ_G0016781.1 mouse_genomes_project 1 211992649 212104321 - MGP_NODShiLtJ_P0023867 Mark1 protein_coding protein_coding MGP_NODShiLtJ_T0023868.1 MGP_NODShiLtJ_G0016781.1 mouse_genomes_project 1 212015371 212104226 - MGP_NODShiLtJ_P0023868 Mark1 protein_coding protein_coding MGP_NODShiLtJ_T0011946.1 MGP_NODShiLtJ_G0010054.1 mouse_genomes_project 1 68516291 68518918 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023676.1 MGP_NODShiLtJ_G0016737.1 mouse_genomes_project 1 207135508 207234818 + MGP_NODShiLtJ_P0023676 Itpkb protein_coding protein_coding MGP_NODShiLtJ_T0023677.1 MGP_NODShiLtJ_G0016737.1 mouse_genomes_project 1 207138889 207143482 + Itpkb protein_coding retained_intron MGP_NODShiLtJ_T0023469.1 MGP_NODShiLtJ_G0016689.1 mouse_genomes_project 1 200027923 200028862 + MGP_NODShiLtJ_P0023469 Olfr432 protein_coding protein_coding MGP_NODShiLtJ_T0021470.1 MGP_NODShiLtJ_G0016258.1 mouse_genomes_project 1 126848711 126928907 - MGP_NODShiLtJ_P0021470 Cdh19 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0021471.1 MGP_NODShiLtJ_G0016258.1 mouse_genomes_project 1 126920581 126975931 - Cdh19 protein_coding processed_transcript MGP_NODShiLtJ_T0012002.1 MGP_NODShiLtJ_G0010110.1 mouse_genomes_project 1 93356405 93359318 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012237.1 MGP_NODShiLtJ_G0010345.1 mouse_genomes_project 1 210663888 210664239 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022983.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190603081 190614533 - MGP_NODShiLtJ_P0022983 Mpzl1 protein_coding protein_coding MGP_NODShiLtJ_T0022984.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190603120 190646185 - MGP_NODShiLtJ_P0022984 Mpzl1 protein_coding protein_coding MGP_NODShiLtJ_T0022985.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190603283 190646065 - MGP_NODShiLtJ_P0022985 Mpzl1 protein_coding protein_coding MGP_NODShiLtJ_T0022986.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190603361 190646210 - MGP_NODShiLtJ_P0022986 Mpzl1 protein_coding protein_coding MGP_NODShiLtJ_T0022987.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190610557 190619358 - Mpzl1 protein_coding processed_transcript MGP_NODShiLtJ_T0022988.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190612965 190614489 - Mpzl1 protein_coding retained_intron MGP_NODShiLtJ_T0022989.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190614379 190622711 - Mpzl1 protein_coding processed_transcript MGP_NODShiLtJ_T0022990.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190614447 190646114 - MGP_NODShiLtJ_P0022990 Mpzl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022991.1 MGP_NODShiLtJ_G0016565.1 mouse_genomes_project 1 190617173 190645757 - Mpzl1 protein_coding processed_transcript MGP_NODShiLtJ_T0012061.1 MGP_NODShiLtJ_G0010169.1 mouse_genomes_project 1 123673567 123673745 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016873.1 MGP_NODShiLtJ_G0014968.1 mouse_genomes_project 1 58216842 58299785 + Gm28177 processed_transcript processed_transcript MGP_NODShiLtJ_T0021988.1 MGP_NODShiLtJ_G0016369.1 mouse_genomes_project 1 153385519 153389484 - MGP_NODShiLtJ_P0021988 Btg2 protein_coding protein_coding MGP_NODShiLtJ_T0000570.1 MGP_NODShiLtJ_G0000506.1 mouse_genomes_project 1 120796221 120801174 + TEC TEC MGP_NODShiLtJ_T0098575.1 MGP_NODShiLtJ_G0036969.1 mouse_genomes_project 1 188184832 188184940 + Gm24940 snRNA snRNA MGP_NODShiLtJ_T0011966.1 MGP_NODShiLtJ_G0010074.1 mouse_genomes_project 1 74019978 74020316 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018802.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15293237 15601962 - MGP_NODShiLtJ_P0018802 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018803.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15293364 15601884 - MGP_NODShiLtJ_P0018803 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018804.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15293367 15601884 - MGP_NODShiLtJ_P0018804 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018805.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15293373 15601962 - MGP_NODShiLtJ_P0018805 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018806.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15293379 15602688 - MGP_NODShiLtJ_P0018806 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018807.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15419014 15601903 - MGP_NODShiLtJ_P0018807 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018808.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15419724 15450541 - Stau2 protein_coding processed_transcript MGP_NODShiLtJ_T0018809.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15419825 15601909 - MGP_NODShiLtJ_P0018809 Stau2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018810.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15421120 15601963 - MGP_NODShiLtJ_P0018810 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018811.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15421224 15601975 - MGP_NODShiLtJ_P0018811 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018812.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15466676 15601926 - MGP_NODShiLtJ_P0018812 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018813.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15516319 15602656 - MGP_NODShiLtJ_P0018813 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018814.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15535323 15601916 - MGP_NODShiLtJ_P0018814 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018815.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15535712 15602597 - MGP_NODShiLtJ_P0018815 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0018816.1 MGP_NODShiLtJ_G0015722.1 mouse_genomes_project 1 15535821 15602596 - MGP_NODShiLtJ_P0018816 Stau2 protein_coding protein_coding MGP_NODShiLtJ_T0012247.1 MGP_NODShiLtJ_G0010355.1 mouse_genomes_project 1 218601590 218601795 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101462.1 MGP_NODShiLtJ_G0039632.1 mouse_genomes_project 1 17682348 17693756 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0020458.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84628484 84629357 - Glb1l protein_coding processed_transcript MGP_NODShiLtJ_T0020459.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84628491 84642435 - MGP_NODShiLtJ_P0020459 Glb1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020460.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84629339 84632518 - Glb1l protein_coding retained_intron MGP_NODShiLtJ_T0020461.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84629595 84642435 - MGP_NODShiLtJ_P0020461 Glb1l protein_coding protein_coding MGP_NODShiLtJ_T0020462.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84629739 84641083 - MGP_NODShiLtJ_P0020462 Glb1l protein_coding protein_coding MGP_NODShiLtJ_T0020463.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84629739 84634236 - MGP_NODShiLtJ_P0020463 Glb1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020464.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84630077 84641151 - Glb1l protein_coding retained_intron MGP_NODShiLtJ_T0020465.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84630341 84632594 - Glb1l protein_coding retained_intron MGP_NODShiLtJ_T0020466.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84632297 84633641 - Glb1l protein_coding retained_intron MGP_NODShiLtJ_T0020467.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84632551 84633169 - Glb1l protein_coding retained_intron MGP_NODShiLtJ_T0020468.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84634064 84642470 - MGP_NODShiLtJ_P0020468 Glb1l protein_coding protein_coding MGP_NODShiLtJ_T0020469.1 MGP_NODShiLtJ_G0016043.1 mouse_genomes_project 1 84639691 84642410 - Glb1l protein_coding retained_intron MGP_NODShiLtJ_T0000620.1 MGP_NODShiLtJ_G0000555.1 mouse_genomes_project 1 153117000 153118676 + TEC TEC MGP_NODShiLtJ_T0022880.1 MGP_NODShiLtJ_G0016538.1 mouse_genomes_project 1 187675653 187711105 - MGP_NODShiLtJ_P0022880 Fmo3 protein_coding protein_coding MGP_NODShiLtJ_T0022881.1 MGP_NODShiLtJ_G0016538.1 mouse_genomes_project 1 187685347 187711106 - Fmo3 protein_coding retained_intron MGP_NODShiLtJ_T0098533.1 MGP_NODShiLtJ_G0036927.1 mouse_genomes_project 1 76835023 76835117 - Gm25542 snRNA snRNA MGP_NODShiLtJ_T0005868.1 MGP_NODShiLtJ_G0004915.1 mouse_genomes_project 1 158687962 158688628 - 1700019P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0005743.1 MGP_NODShiLtJ_G0004812.1 mouse_genomes_project 1 88582388 88583783 + Gm29187 lincRNA lincRNA MGP_NODShiLtJ_T0012182.1 MGP_NODShiLtJ_G0010290.1 mouse_genomes_project 1 183436714 183437197 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000525.1 MGP_NODShiLtJ_G0000461.1 mouse_genomes_project 1 92656164 92658999 + TEC TEC MGP_NODShiLtJ_T0012153.1 MGP_NODShiLtJ_G0010261.1 mouse_genomes_project 1 171916790 171917273 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005656.1 MGP_NODShiLtJ_G0004746.1 mouse_genomes_project 1 47762367 47762979 + Gm29157 lincRNA lincRNA MGP_NODShiLtJ_T0000728.1 MGP_NODShiLtJ_G0000662.1 mouse_genomes_project 1 202253954 202255598 - TEC TEC MGP_NODShiLtJ_T0005913.1 MGP_NODShiLtJ_G0004951.1 mouse_genomes_project 1 189630757 189638983 - Gm36945 lincRNA lincRNA MGP_NODShiLtJ_T0005914.1 MGP_NODShiLtJ_G0004951.1 mouse_genomes_project 1 189630934 189639011 - Gm36945 lincRNA lincRNA MGP_NODShiLtJ_T0011746.1 MGP_NODShiLtJ_G0009854.1 mouse_genomes_project 1 4098303 4098776 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022376.1 MGP_NODShiLtJ_G0016450.1 mouse_genomes_project 1 174860669 174880620 + MGP_NODShiLtJ_P0022376 Ivns1abp protein_coding protein_coding MGP_NODShiLtJ_T0022377.1 MGP_NODShiLtJ_G0016450.1 mouse_genomes_project 1 174860701 174872998 + MGP_NODShiLtJ_P0022377 Ivns1abp protein_coding protein_coding MGP_NODShiLtJ_T0022378.1 MGP_NODShiLtJ_G0016450.1 mouse_genomes_project 1 174860710 174880613 + MGP_NODShiLtJ_P0022378 Ivns1abp protein_coding protein_coding MGP_NODShiLtJ_T0022379.1 MGP_NODShiLtJ_G0016450.1 mouse_genomes_project 1 174860770 174879563 + MGP_NODShiLtJ_P0022379 Ivns1abp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022380.1 MGP_NODShiLtJ_G0016450.1 mouse_genomes_project 1 174877449 174878237 + MGP_NODShiLtJ_P0022380 Ivns1abp protein_coding protein_coding MGP_NODShiLtJ_T0012147.1 MGP_NODShiLtJ_G0010255.1 mouse_genomes_project 1 166688710 166689706 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011816.1 MGP_NODShiLtJ_G0009924.1 mouse_genomes_project 1 27293519 27294170 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005583.1 MGP_NODShiLtJ_G0004696.1 mouse_genomes_project 1 5240047 5279467 - lincRNA lincRNA MGP_NODShiLtJ_T0005584.1 MGP_NODShiLtJ_G0004696.1 mouse_genomes_project 1 5243946 5246632 - lincRNA retained_intron MGP_NODShiLtJ_T0000707.1 MGP_NODShiLtJ_G0000641.1 mouse_genomes_project 1 187872669 187874652 + TEC TEC MGP_NODShiLtJ_T0005621.1 MGP_NODShiLtJ_G0004727.1 mouse_genomes_project 1 39241632 39246046 - Gm37146 lincRNA lincRNA MGP_NODShiLtJ_T0101250.1 MGP_NODShiLtJ_G0039537.1 mouse_genomes_project 1 17440736 17466927 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101251.1 MGP_NODShiLtJ_G0039537.1 mouse_genomes_project 1 17456279 17466406 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0098577.1 MGP_NODShiLtJ_G0036971.1 mouse_genomes_project 1 192443364 192443471 + Gm24182 snRNA snRNA MGP_NODShiLtJ_T0020695.1 MGP_NODShiLtJ_G0016081.1 mouse_genomes_project 1 92615828 92742965 + MGP_NODShiLtJ_P0020695 Rhbdd1 protein_coding protein_coding MGP_NODShiLtJ_T0020696.1 MGP_NODShiLtJ_G0016081.1 mouse_genomes_project 1 92616018 92619105 + Rhbdd1 protein_coding retained_intron MGP_NODShiLtJ_T0020697.1 MGP_NODShiLtJ_G0016081.1 mouse_genomes_project 1 92638715 92742965 + MGP_NODShiLtJ_P0020697 Rhbdd1 protein_coding protein_coding MGP_NODShiLtJ_T0009474.1 MGP_NODShiLtJ_G0007607.1 mouse_genomes_project 1 219676972 219677053 - Mir3473c miRNA miRNA MGP_NODShiLtJ_T0000687.1 MGP_NODShiLtJ_G0000621.1 mouse_genomes_project 1 183511574 183514423 + TEC TEC MGP_NODShiLtJ_T0023533.1 MGP_NODShiLtJ_G0016713.1 mouse_genomes_project 1 202167964 202518873 - MGP_NODShiLtJ_P0023533 Pld5 protein_coding protein_coding MGP_NODShiLtJ_T0023534.1 MGP_NODShiLtJ_G0016713.1 mouse_genomes_project 1 202168065 202518887 - MGP_NODShiLtJ_P0023534 Pld5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023535.1 MGP_NODShiLtJ_G0016713.1 mouse_genomes_project 1 202171945 202452560 - MGP_NODShiLtJ_P0023535 Pld5 protein_coding protein_coding MGP_NODShiLtJ_T0023536.1 MGP_NODShiLtJ_G0016713.1 mouse_genomes_project 1 202213098 202518850 - Pld5 protein_coding retained_intron MGP_NODShiLtJ_T0023537.1 MGP_NODShiLtJ_G0016713.1 mouse_genomes_project 1 202264972 202452459 - Pld5 protein_coding retained_intron MGP_NODShiLtJ_T0023538.1 MGP_NODShiLtJ_G0016713.1 mouse_genomes_project 1 202504377 202518849 - MGP_NODShiLtJ_P0023538 Pld5 protein_coding protein_coding MGP_NODShiLtJ_T0022231.1 MGP_NODShiLtJ_G0016419.1 mouse_genomes_project 1 158276038 158355015 - MGP_NODShiLtJ_P0022231 Nek7 protein_coding protein_coding MGP_NODShiLtJ_T0022232.1 MGP_NODShiLtJ_G0016419.1 mouse_genomes_project 1 158306707 158415298 - Nek7 protein_coding retained_intron MGP_NODShiLtJ_T0002893.1 MGP_NODShiLtJ_G0002716.1 mouse_genomes_project 1 190492719 190494096 - Gm38325 antisense antisense MGP_NODShiLtJ_T0009378.1 MGP_NODShiLtJ_G0007511.1 mouse_genomes_project 1 12100017 12100099 + Gm27881 miRNA miRNA MGP_NODShiLtJ_T0000410.1 MGP_NODShiLtJ_G0000347.1 mouse_genomes_project 1 26439693 26444243 - TEC TEC MGP_NODShiLtJ_T0021868.1 MGP_NODShiLtJ_G0016343.1 mouse_genomes_project 1 151481570 151517559 - MGP_NODShiLtJ_P0021868 Tmcc2 protein_coding protein_coding MGP_NODShiLtJ_T0021869.1 MGP_NODShiLtJ_G0016343.1 mouse_genomes_project 1 151481571 151493142 - Tmcc2 protein_coding retained_intron MGP_NODShiLtJ_T0021870.1 MGP_NODShiLtJ_G0016343.1 mouse_genomes_project 1 151481571 151493143 - MGP_NODShiLtJ_P0021870 Tmcc2 protein_coding protein_coding MGP_NODShiLtJ_T0021871.1 MGP_NODShiLtJ_G0016343.1 mouse_genomes_project 1 151485854 151492328 - Tmcc2 protein_coding processed_transcript MGP_NODShiLtJ_T0021872.1 MGP_NODShiLtJ_G0016343.1 mouse_genomes_project 1 151486281 151490204 - Tmcc2 protein_coding processed_transcript MGP_NODShiLtJ_T0018977.1 MGP_NODShiLtJ_G0015763.1 mouse_genomes_project 1 33624016 33714458 - MGP_NODShiLtJ_P0018977 4931428L18Rik protein_coding protein_coding MGP_NODShiLtJ_T0018978.1 MGP_NODShiLtJ_G0015763.1 mouse_genomes_project 1 33629952 33714518 - MGP_NODShiLtJ_P0018978 4931428L18Rik protein_coding protein_coding MGP_NODShiLtJ_T0018979.1 MGP_NODShiLtJ_G0015763.1 mouse_genomes_project 1 33630505 33714489 - MGP_NODShiLtJ_P0018979 4931428L18Rik protein_coding protein_coding MGP_NODShiLtJ_T0023311.1 MGP_NODShiLtJ_G0016641.1 mouse_genomes_project 1 197436338 197438882 + MGP_NODShiLtJ_P0023311 Gm10521 protein_coding protein_coding MGP_NODShiLtJ_T0101497.1 MGP_NODShiLtJ_G0039667.1 mouse_genomes_project 1 121990617 121992406 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002788.1 MGP_NODShiLtJ_G0002634.1 mouse_genomes_project 1 84392495 84397766 + Gm15841 antisense antisense MGP_NODShiLtJ_T0011788.1 MGP_NODShiLtJ_G0009896.1 mouse_genomes_project 1 16614074 16614546 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020156.1 MGP_NODShiLtJ_G0015984.1 mouse_genomes_project 1 75096496 75136068 - MGP_NODShiLtJ_P0020156 Lancl1 protein_coding protein_coding MGP_NODShiLtJ_T0020157.1 MGP_NODShiLtJ_G0015984.1 mouse_genomes_project 1 75096496 75136061 - MGP_NODShiLtJ_P0020157 Lancl1 protein_coding protein_coding MGP_NODShiLtJ_T0020158.1 MGP_NODShiLtJ_G0015984.1 mouse_genomes_project 1 75100631 75136030 - MGP_NODShiLtJ_P0020158 Lancl1 protein_coding protein_coding MGP_NODShiLtJ_T0020159.1 MGP_NODShiLtJ_G0015984.1 mouse_genomes_project 1 75104270 75118311 - Lancl1 protein_coding processed_transcript MGP_NODShiLtJ_T0020160.1 MGP_NODShiLtJ_G0015984.1 mouse_genomes_project 1 75107197 75136030 - MGP_NODShiLtJ_P0020160 Lancl1 protein_coding protein_coding MGP_NODShiLtJ_T0020161.1 MGP_NODShiLtJ_G0015984.1 mouse_genomes_project 1 75116854 75119463 - Lancl1 protein_coding retained_intron MGP_NODShiLtJ_T0020032.1 MGP_NODShiLtJ_G0015957.1 mouse_genomes_project 1 71403103 71434620 - MGP_NODShiLtJ_P0020032 Mdh1b protein_coding protein_coding MGP_NODShiLtJ_T0000431.1 MGP_NODShiLtJ_G0000367.1 mouse_genomes_project 1 37313766 37315991 + TEC TEC MGP_NODShiLtJ_T0022202.1 MGP_NODShiLtJ_G0016414.1 mouse_genomes_project 1 155978251 156009963 + Kif14 protein_coding retained_intron MGP_NODShiLtJ_T0022203.1 MGP_NODShiLtJ_G0016414.1 mouse_genomes_project 1 155979843 156056342 + MGP_NODShiLtJ_P0022203 Kif14 protein_coding protein_coding MGP_NODShiLtJ_T0022204.1 MGP_NODShiLtJ_G0016414.1 mouse_genomes_project 1 155979843 156051463 + MGP_NODShiLtJ_P0022204 Kif14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022205.1 MGP_NODShiLtJ_G0016414.1 mouse_genomes_project 1 155979866 156056342 + MGP_NODShiLtJ_P0022205 Kif14 protein_coding protein_coding MGP_NODShiLtJ_T0022206.1 MGP_NODShiLtJ_G0016414.1 mouse_genomes_project 1 155980911 155983630 + Kif14 protein_coding retained_intron MGP_NODShiLtJ_T0022207.1 MGP_NODShiLtJ_G0016414.1 mouse_genomes_project 1 155988970 155993411 + Kif14 protein_coding processed_transcript MGP_NODShiLtJ_T0022208.1 MGP_NODShiLtJ_G0016414.1 mouse_genomes_project 1 155988970 155993411 + Kif14 protein_coding processed_transcript MGP_NODShiLtJ_T0022209.1 MGP_NODShiLtJ_G0016414.1 mouse_genomes_project 1 155988970 155993411 + MGP_NODShiLtJ_P0022209 Kif14 protein_coding protein_coding MGP_NODShiLtJ_T0021242.1 MGP_NODShiLtJ_G0016203.1 mouse_genomes_project 1 104656960 104667139 + MGP_NODShiLtJ_P0021242 Agxt protein_coding protein_coding MGP_NODShiLtJ_T0021243.1 MGP_NODShiLtJ_G0016203.1 mouse_genomes_project 1 104657288 104659725 + Agxt protein_coding retained_intron MGP_NODShiLtJ_T0021244.1 MGP_NODShiLtJ_G0016203.1 mouse_genomes_project 1 104661596 104667135 + Agxt protein_coding processed_transcript MGP_NODShiLtJ_T0011801.1 MGP_NODShiLtJ_G0009909.1 mouse_genomes_project 1 21336346 21336573 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022521.1 MGP_NODShiLtJ_G0016479.1 mouse_genomes_project 1 178934670 178937946 - MGP_NODShiLtJ_P0022521 Ier5 protein_coding protein_coding MGP_NODShiLtJ_T0021925.1 MGP_NODShiLtJ_G0016353.1 mouse_genomes_project 1 152452187 152511693 + MGP_NODShiLtJ_P0021925 Plekha6 protein_coding protein_coding MGP_NODShiLtJ_T0021926.1 MGP_NODShiLtJ_G0016353.1 mouse_genomes_project 1 152463931 152507293 + MGP_NODShiLtJ_P0021926 Plekha6 protein_coding protein_coding MGP_NODShiLtJ_T0021927.1 MGP_NODShiLtJ_G0016353.1 mouse_genomes_project 1 152465932 152509474 + MGP_NODShiLtJ_P0021927 Plekha6 protein_coding protein_coding MGP_NODShiLtJ_T0021928.1 MGP_NODShiLtJ_G0016353.1 mouse_genomes_project 1 152476572 152479449 + Plekha6 protein_coding processed_transcript MGP_NODShiLtJ_T0021929.1 MGP_NODShiLtJ_G0016353.1 mouse_genomes_project 1 152481362 152488926 + MGP_NODShiLtJ_P0021929 Plekha6 protein_coding protein_coding MGP_NODShiLtJ_T0021930.1 MGP_NODShiLtJ_G0016353.1 mouse_genomes_project 1 152481368 152493174 + MGP_NODShiLtJ_P0021930 Plekha6 protein_coding protein_coding MGP_NODShiLtJ_T0021931.1 MGP_NODShiLtJ_G0016353.1 mouse_genomes_project 1 152500018 152502494 + Plekha6 protein_coding retained_intron MGP_NODShiLtJ_T0021932.1 MGP_NODShiLtJ_G0016353.1 mouse_genomes_project 1 152506206 152509875 + Plekha6 protein_coding retained_intron MGP_NODShiLtJ_T0018784.1 MGP_NODShiLtJ_G0015716.1 mouse_genomes_project 1 14329098 14778618 + MGP_NODShiLtJ_P0018784 Kcnb2 protein_coding protein_coding MGP_NODShiLtJ_T0018785.1 MGP_NODShiLtJ_G0015716.1 mouse_genomes_project 1 14353769 14789879 + MGP_NODShiLtJ_P0018785 Kcnb2 protein_coding protein_coding MGP_NODShiLtJ_T0009461.1 MGP_NODShiLtJ_G0007594.1 mouse_genomes_project 1 194226320 194226440 - Mir6354 miRNA miRNA MGP_NODShiLtJ_T0005766.1 MGP_NODShiLtJ_G0004830.1 mouse_genomes_project 1 100148050 100156093 - Gm29337 lincRNA lincRNA MGP_NODShiLtJ_T0009395.1 MGP_NODShiLtJ_G0007528.1 mouse_genomes_project 1 47956714 47956824 - Gm24180 miRNA miRNA MGP_NODShiLtJ_T0018817.1 MGP_NODShiLtJ_G0015723.1 mouse_genomes_project 1 15631064 15714757 - MGP_NODShiLtJ_P0018817 Ube2w protein_coding protein_coding MGP_NODShiLtJ_T0018818.1 MGP_NODShiLtJ_G0015723.1 mouse_genomes_project 1 15657698 15681356 - Ube2w protein_coding processed_transcript MGP_NODShiLtJ_T0018819.1 MGP_NODShiLtJ_G0015723.1 mouse_genomes_project 1 15663646 15714934 - MGP_NODShiLtJ_P0018819 Ube2w protein_coding protein_coding MGP_NODShiLtJ_T0018820.1 MGP_NODShiLtJ_G0015723.1 mouse_genomes_project 1 15677893 15714704 - MGP_NODShiLtJ_P0018820 Ube2w protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018821.1 MGP_NODShiLtJ_G0015723.1 mouse_genomes_project 1 15680115 15714729 - Ube2w protein_coding retained_intron MGP_NODShiLtJ_T0018822.1 MGP_NODShiLtJ_G0015723.1 mouse_genomes_project 1 15697716 15714729 - Ube2w protein_coding retained_intron MGP_NODShiLtJ_T0020573.1 MGP_NODShiLtJ_G0016057.1 mouse_genomes_project 1 84923554 84929708 + MGP_NODShiLtJ_P0020573 Tmem198 protein_coding protein_coding MGP_NODShiLtJ_T0020574.1 MGP_NODShiLtJ_G0016057.1 mouse_genomes_project 1 84923598 84926629 + MGP_NODShiLtJ_P0020574 Tmem198 protein_coding protein_coding MGP_NODShiLtJ_T0020575.1 MGP_NODShiLtJ_G0016057.1 mouse_genomes_project 1 84923602 84929720 + MGP_NODShiLtJ_P0020575 Tmem198 protein_coding protein_coding MGP_NODShiLtJ_T0020576.1 MGP_NODShiLtJ_G0016057.1 mouse_genomes_project 1 84923726 84926692 + MGP_NODShiLtJ_P0020576 Tmem198 protein_coding protein_coding MGP_NODShiLtJ_T0022405.1 MGP_NODShiLtJ_G0016454.1 mouse_genomes_project 1 175102334 175182671 + MGP_NODShiLtJ_P0022405 Fam129a protein_coding protein_coding MGP_NODShiLtJ_T0022406.1 MGP_NODShiLtJ_G0016454.1 mouse_genomes_project 1 175102521 175262858 + MGP_NODShiLtJ_P0022406 Fam129a protein_coding protein_coding MGP_NODShiLtJ_T0022407.1 MGP_NODShiLtJ_G0016454.1 mouse_genomes_project 1 175102600 175260261 + MGP_NODShiLtJ_P0022407 Fam129a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022408.1 MGP_NODShiLtJ_G0016454.1 mouse_genomes_project 1 175102644 175230761 + MGP_NODShiLtJ_P0022408 Fam129a protein_coding protein_coding MGP_NODShiLtJ_T0022409.1 MGP_NODShiLtJ_G0016454.1 mouse_genomes_project 1 175216329 175260261 + Fam129a protein_coding processed_transcript MGP_NODShiLtJ_T0000609.1 MGP_NODShiLtJ_G0000545.1 mouse_genomes_project 1 149410264 149412809 + TEC TEC MGP_NODShiLtJ_T0020076.1 MGP_NODShiLtJ_G0015969.1 mouse_genomes_project 1 72847328 72849715 - MGP_NODShiLtJ_P0020076 Crygc protein_coding protein_coding MGP_NODShiLtJ_T0020077.1 MGP_NODShiLtJ_G0015969.1 mouse_genomes_project 1 72847334 72849547 - MGP_NODShiLtJ_P0020077 Crygc protein_coding protein_coding MGP_NODShiLtJ_T0005782.1 MGP_NODShiLtJ_G0004846.1 mouse_genomes_project 1 104072637 104074897 + Gm28479 lincRNA lincRNA MGP_NODShiLtJ_T0023933.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216377374 216424488 - MGP_NODShiLtJ_P0023933 Kctd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023934.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216377374 216424500 - MGP_NODShiLtJ_P0023934 Kctd3 protein_coding protein_coding MGP_NODShiLtJ_T0023935.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216378195 216380550 - Kctd3 protein_coding retained_intron MGP_NODShiLtJ_T0023936.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216378308 216380168 - Kctd3 protein_coding retained_intron MGP_NODShiLtJ_T0023937.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216378420 216394071 - MGP_NODShiLtJ_P0023937 Kctd3 protein_coding protein_coding MGP_NODShiLtJ_T0023938.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216378463 216379667 - Kctd3 protein_coding retained_intron MGP_NODShiLtJ_T0023939.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216379728 216392084 - Kctd3 protein_coding processed_transcript MGP_NODShiLtJ_T0023940.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216394021 216397281 - Kctd3 protein_coding retained_intron MGP_NODShiLtJ_T0023941.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216396271 216424501 - Kctd3 protein_coding retained_intron MGP_NODShiLtJ_T0023942.1 MGP_NODShiLtJ_G0016795.1 mouse_genomes_project 1 216410557 216414376 - Kctd3 protein_coding retained_intron MGP_NODShiLtJ_T0022123.1 MGP_NODShiLtJ_G0016398.1 mouse_genomes_project 1 155187221 155220164 + MGP_NODShiLtJ_P0022123 Csrp1 protein_coding protein_coding MGP_NODShiLtJ_T0022124.1 MGP_NODShiLtJ_G0016398.1 mouse_genomes_project 1 155195528 155220164 + MGP_NODShiLtJ_P0022124 Csrp1 protein_coding protein_coding MGP_NODShiLtJ_T0011126.1 MGP_NODShiLtJ_G0009259.1 mouse_genomes_project 1 8616915 8617155 + Gm26348 misc_RNA misc_RNA MGP_NODShiLtJ_T0023844.1 MGP_NODShiLtJ_G0016774.1 mouse_genomes_project 1 210418834 210419442 + Hhipl2 protein_coding processed_transcript MGP_NODShiLtJ_T0023845.1 MGP_NODShiLtJ_G0016774.1 mouse_genomes_project 1 210418868 210440679 + MGP_NODShiLtJ_P0023845 Hhipl2 protein_coding protein_coding MGP_NODShiLtJ_T0023846.1 MGP_NODShiLtJ_G0016774.1 mouse_genomes_project 1 210419074 210441000 + MGP_NODShiLtJ_P0023846 Hhipl2 protein_coding protein_coding MGP_NODShiLtJ_T0023847.1 MGP_NODShiLtJ_G0016774.1 mouse_genomes_project 1 210419171 210425303 + Hhipl2 protein_coding processed_transcript MGP_NODShiLtJ_T0011825.1 MGP_NODShiLtJ_G0009933.1 mouse_genomes_project 1 32225356 32225978 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005850.1 MGP_NODShiLtJ_G0004902.1 mouse_genomes_project 1 155750856 155753665 + A430034D21Rik lincRNA lincRNA MGP_NODShiLtJ_T0000421.1 MGP_NODShiLtJ_G0000358.1 mouse_genomes_project 1 35657044 35659514 + TEC TEC MGP_NODShiLtJ_T0023053.1 MGP_NODShiLtJ_G0016578.1 mouse_genomes_project 1 191695397 191716408 - MGP_NODShiLtJ_P0023053 Fmo9 protein_coding protein_coding MGP_NODShiLtJ_T0023054.1 MGP_NODShiLtJ_G0016578.1 mouse_genomes_project 1 191696630 191712250 - MGP_NODShiLtJ_P0023054 Fmo9 protein_coding protein_coding MGP_NODShiLtJ_T0023630.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206697778 206957713 + MGP_NODShiLtJ_P0023630 Cdc42bpa protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023631.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206697948 206958703 + MGP_NODShiLtJ_P0023631 Cdc42bpa protein_coding protein_coding MGP_NODShiLtJ_T0023632.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206698061 206961150 + MGP_NODShiLtJ_P0023632 Cdc42bpa protein_coding protein_coding MGP_NODShiLtJ_T0023633.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206698236 206897377 + MGP_NODShiLtJ_P0023633 Cdc42bpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023634.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206701529 206957713 + MGP_NODShiLtJ_P0023634 Cdc42bpa protein_coding protein_coding MGP_NODShiLtJ_T0023635.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206701529 206957713 + MGP_NODShiLtJ_P0023635 Cdc42bpa protein_coding protein_coding MGP_NODShiLtJ_T0023636.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206740970 206803354 + Cdc42bpa protein_coding retained_intron MGP_NODShiLtJ_T0023637.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206860860 206879266 + Cdc42bpa protein_coding retained_intron MGP_NODShiLtJ_T0023638.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206885563 206958135 + MGP_NODShiLtJ_P0023638 Cdc42bpa protein_coding protein_coding MGP_NODShiLtJ_T0023639.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206891436 206904879 + Cdc42bpa protein_coding retained_intron MGP_NODShiLtJ_T0023640.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206893411 206897652 + Cdc42bpa protein_coding retained_intron MGP_NODShiLtJ_T0023641.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206893611 206961149 + MGP_NODShiLtJ_P0023641 Cdc42bpa protein_coding protein_coding MGP_NODShiLtJ_T0023642.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206893684 206944788 + MGP_NODShiLtJ_P0023642 Cdc42bpa protein_coding protein_coding MGP_NODShiLtJ_T0023643.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206896824 206927150 + MGP_NODShiLtJ_P0023643 Cdc42bpa protein_coding protein_coding MGP_NODShiLtJ_T0023644.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206896842 206901793 + Cdc42bpa protein_coding retained_intron MGP_NODShiLtJ_T0023645.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206910433 206928978 + Cdc42bpa protein_coding processed_transcript MGP_NODShiLtJ_T0023646.1 MGP_NODShiLtJ_G0016734.1 mouse_genomes_project 1 206956553 206957841 + Cdc42bpa protein_coding retained_intron MGP_NODShiLtJ_T0022476.1 MGP_NODShiLtJ_G0016469.1 mouse_genomes_project 1 177191293 177250533 - MGP_NODShiLtJ_P0022476 Npl protein_coding protein_coding MGP_NODShiLtJ_T0022477.1 MGP_NODShiLtJ_G0016469.1 mouse_genomes_project 1 177191650 177250250 - MGP_NODShiLtJ_P0022477 Npl protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022478.1 MGP_NODShiLtJ_G0016469.1 mouse_genomes_project 1 177191650 177250211 - MGP_NODShiLtJ_P0022478 Npl protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022479.1 MGP_NODShiLtJ_G0016469.1 mouse_genomes_project 1 177248907 177250197 - Npl protein_coding retained_intron MGP_NODShiLtJ_T0018593.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3869392 3905384 + MGP_NODShiLtJ_P0018593 Rb1cc1 protein_coding protein_coding MGP_NODShiLtJ_T0018594.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3869422 3909441 + MGP_NODShiLtJ_P0018594 Rb1cc1 protein_coding protein_coding MGP_NODShiLtJ_T0018595.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3885658 3959225 + MGP_NODShiLtJ_P0018595 Rb1cc1 protein_coding protein_coding MGP_NODShiLtJ_T0018596.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3885734 3901779 + Rb1cc1 protein_coding retained_intron MGP_NODShiLtJ_T0018597.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3886079 3905083 + MGP_NODShiLtJ_P0018597 Rb1cc1 protein_coding protein_coding MGP_NODShiLtJ_T0018598.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3899076 3932956 + MGP_NODShiLtJ_P0018598 Rb1cc1 protein_coding protein_coding MGP_NODShiLtJ_T0018599.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3911984 3932285 + Rb1cc1 protein_coding retained_intron MGP_NODShiLtJ_T0018600.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3933014 3959440 + MGP_NODShiLtJ_P0018600 Rb1cc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018601.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3933903 3935185 + Rb1cc1 protein_coding processed_transcript MGP_NODShiLtJ_T0018602.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3934021 3950194 + Rb1cc1 protein_coding retained_intron MGP_NODShiLtJ_T0018603.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3945375 3947259 + Rb1cc1 protein_coding retained_intron MGP_NODShiLtJ_T0018604.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3947307 3949298 + Rb1cc1 protein_coding retained_intron MGP_NODShiLtJ_T0018605.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3947337 3959439 + MGP_NODShiLtJ_P0018605 Rb1cc1 protein_coding protein_coding MGP_NODShiLtJ_T0018606.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3949989 3957149 + Rb1cc1 protein_coding retained_intron MGP_NODShiLtJ_T0018607.1 MGP_NODShiLtJ_G0015686.1 mouse_genomes_project 1 3955061 3960570 + Rb1cc1 protein_coding retained_intron MGP_NODShiLtJ_T0021019.1 MGP_NODShiLtJ_G0016153.1 mouse_genomes_project 1 99466593 99482888 - MGP_NODShiLtJ_P0021019 Hjurp protein_coding protein_coding MGP_NODShiLtJ_T0021020.1 MGP_NODShiLtJ_G0016153.1 mouse_genomes_project 1 99469172 99482812 - MGP_NODShiLtJ_P0021020 Hjurp protein_coding protein_coding MGP_NODShiLtJ_T0021021.1 MGP_NODShiLtJ_G0016153.1 mouse_genomes_project 1 99469642 99482724 - MGP_NODShiLtJ_P0021021 Hjurp protein_coding protein_coding MGP_NODShiLtJ_T0021022.1 MGP_NODShiLtJ_G0016153.1 mouse_genomes_project 1 99470804 99474060 - MGP_NODShiLtJ_P0021022 Hjurp protein_coding protein_coding MGP_NODShiLtJ_T0021023.1 MGP_NODShiLtJ_G0016153.1 mouse_genomes_project 1 99474004 99477952 - Hjurp protein_coding retained_intron MGP_NODShiLtJ_T0021024.1 MGP_NODShiLtJ_G0016153.1 mouse_genomes_project 1 99479652 99482834 - Hjurp protein_coding retained_intron MGP_NODShiLtJ_T0000708.1 MGP_NODShiLtJ_G0000642.1 mouse_genomes_project 1 188086648 188088918 - TEC TEC MGP_NODShiLtJ_T0021642.1 MGP_NODShiLtJ_G0016292.1 mouse_genomes_project 1 146057724 146263984 - MGP_NODShiLtJ_P0021642 Tmem163 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021643.1 MGP_NODShiLtJ_G0016292.1 mouse_genomes_project 1 146057736 146263909 - MGP_NODShiLtJ_P0021643 Tmem163 protein_coding protein_coding MGP_NODShiLtJ_T0021644.1 MGP_NODShiLtJ_G0016292.1 mouse_genomes_project 1 146062062 146265438 - MGP_NODShiLtJ_P0021644 Tmem163 protein_coding protein_coding MGP_NODShiLtJ_T0021645.1 MGP_NODShiLtJ_G0016292.1 mouse_genomes_project 1 146062525 146071520 - Tmem163 protein_coding retained_intron MGP_NODShiLtJ_T0021646.1 MGP_NODShiLtJ_G0016292.1 mouse_genomes_project 1 146062709 146115521 - Tmem163 protein_coding processed_transcript MGP_NODShiLtJ_T0023370.1 MGP_NODShiLtJ_G0016653.1 mouse_genomes_project 1 197837488 197863827 - MGP_NODShiLtJ_P0023370 Atp1a2 protein_coding protein_coding MGP_NODShiLtJ_T0023371.1 MGP_NODShiLtJ_G0016653.1 mouse_genomes_project 1 197840355 197863827 - Atp1a2 protein_coding retained_intron MGP_NODShiLtJ_T0023372.1 MGP_NODShiLtJ_G0016653.1 mouse_genomes_project 1 197841709 197842244 - Atp1a2 protein_coding retained_intron MGP_NODShiLtJ_T0023373.1 MGP_NODShiLtJ_G0016653.1 mouse_genomes_project 1 197843863 197863827 - MGP_NODShiLtJ_P0023373 Atp1a2 protein_coding protein_coding MGP_NODShiLtJ_T0023374.1 MGP_NODShiLtJ_G0016653.1 mouse_genomes_project 1 197850024 197863827 - Atp1a2 protein_coding retained_intron MGP_NODShiLtJ_T0024163.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 222998745 223041979 - MGP_NODShiLtJ_P0024163 protein_coding protein_coding MGP_NODShiLtJ_T0024164.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223000022 223041958 - MGP_NODShiLtJ_P0024164 protein_coding protein_coding MGP_NODShiLtJ_T0024165.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223002754 223006400 - protein_coding retained_intron MGP_NODShiLtJ_T0024166.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223002850 223042196 - MGP_NODShiLtJ_P0024166 protein_coding protein_coding MGP_NODShiLtJ_T0024167.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223002856 223028491 - MGP_NODShiLtJ_P0024167 protein_coding protein_coding MGP_NODShiLtJ_T0024168.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223025506 223040097 - protein_coding retained_intron MGP_NODShiLtJ_T0024169.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223025633 223042221 - MGP_NODShiLtJ_P0024169 protein_coding protein_coding MGP_NODShiLtJ_T0024170.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223036545 223042169 - protein_coding retained_intron MGP_NODShiLtJ_T0024171.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223039828 223041965 - MGP_NODShiLtJ_P0024171 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024172.1 MGP_NODShiLtJ_G0016837.1 mouse_genomes_project 1 223040280 223041990 - protein_coding retained_intron MGP_NODShiLtJ_T0005622.1 MGP_NODShiLtJ_G0004728.1 mouse_genomes_project 1 39264739 39272799 - Gm33222 lincRNA lincRNA MGP_NODShiLtJ_T0005623.1 MGP_NODShiLtJ_G0004728.1 mouse_genomes_project 1 39264822 39272745 - Gm33222 lincRNA lincRNA MGP_NODShiLtJ_T0098231.1 MGP_NODShiLtJ_G0036642.1 mouse_genomes_project 1 103273294 103274765 + Gm29101 sense_intronic sense_intronic MGP_NODShiLtJ_T0012019.1 MGP_NODShiLtJ_G0010127.1 mouse_genomes_project 1 100535229 100537289 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009447.1 MGP_NODShiLtJ_G0007580.1 mouse_genomes_project 1 166420972 166421061 - Gm25708 miRNA miRNA MGP_NODShiLtJ_T0005833.1 MGP_NODShiLtJ_G0004886.1 mouse_genomes_project 1 143564643 143573637 - 1700121L03Rik lincRNA lincRNA MGP_NODShiLtJ_T0019874.1 MGP_NODShiLtJ_G0015931.1 mouse_genomes_project 1 66637295 66641825 + MGP_NODShiLtJ_P0019874 Fzd7 protein_coding protein_coding MGP_NODShiLtJ_T0020870.1 MGP_NODShiLtJ_G0016120.1 mouse_genomes_project 1 97253521 97296862 - Pde6d protein_coding retained_intron MGP_NODShiLtJ_T0020871.1 MGP_NODShiLtJ_G0016120.1 mouse_genomes_project 1 97253521 97296862 - MGP_NODShiLtJ_P0020871 Pde6d protein_coding protein_coding MGP_NODShiLtJ_T0020872.1 MGP_NODShiLtJ_G0016120.1 mouse_genomes_project 1 97253549 97296944 - MGP_NODShiLtJ_P0020872 Pde6d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020873.1 MGP_NODShiLtJ_G0016120.1 mouse_genomes_project 1 97254047 97296832 - Pde6d protein_coding processed_transcript MGP_NODShiLtJ_T0020874.1 MGP_NODShiLtJ_G0016120.1 mouse_genomes_project 1 97255919 97296862 - MGP_NODShiLtJ_P0020874 Pde6d protein_coding protein_coding MGP_NODShiLtJ_T0020410.1 MGP_NODShiLtJ_G0016037.1 mouse_genomes_project 1 84562014 84570088 - MGP_NODShiLtJ_P0020410 Cnppd1 protein_coding protein_coding MGP_NODShiLtJ_T0020411.1 MGP_NODShiLtJ_G0016037.1 mouse_genomes_project 1 84563229 84569139 - MGP_NODShiLtJ_P0020411 Cnppd1 protein_coding protein_coding MGP_NODShiLtJ_T0020412.1 MGP_NODShiLtJ_G0016037.1 mouse_genomes_project 1 84563232 84566324 - Cnppd1 protein_coding retained_intron MGP_NODShiLtJ_T0020413.1 MGP_NODShiLtJ_G0016037.1 mouse_genomes_project 1 84563232 84570147 - MGP_NODShiLtJ_P0020413 Cnppd1 protein_coding protein_coding MGP_NODShiLtJ_T0020414.1 MGP_NODShiLtJ_G0016037.1 mouse_genomes_project 1 84564246 84565318 - Cnppd1 protein_coding retained_intron MGP_NODShiLtJ_T0020415.1 MGP_NODShiLtJ_G0016037.1 mouse_genomes_project 1 84564553 84565263 - Cnppd1 protein_coding retained_intron MGP_NODShiLtJ_T0020416.1 MGP_NODShiLtJ_G0016037.1 mouse_genomes_project 1 84566794 84569251 - MGP_NODShiLtJ_P0020416 Cnppd1 protein_coding protein_coding MGP_NODShiLtJ_T0020417.1 MGP_NODShiLtJ_G0016037.1 mouse_genomes_project 1 84567044 84570161 - MGP_NODShiLtJ_P0020417 Cnppd1 protein_coding protein_coding MGP_NODShiLtJ_T0097862.1 MGP_NODShiLtJ_G0036274.1 mouse_genomes_project 1 96300298 96300402 + n-R5s215 rRNA rRNA MGP_NODShiLtJ_T0000596.1 MGP_NODShiLtJ_G0000532.1 mouse_genomes_project 1 145971879 145972422 + TEC TEC MGP_NODShiLtJ_T0019942.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67696993 67775367 + MGP_NODShiLtJ_P0019942 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019943.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67697070 67771294 + MGP_NODShiLtJ_P0019943 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019944.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67697070 67775367 + MGP_NODShiLtJ_P0019944 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019945.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67697109 67773723 + MGP_NODShiLtJ_P0019945 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019946.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67697156 67736054 + Abi2 protein_coding retained_intron MGP_NODShiLtJ_T0019947.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67697170 67738580 + MGP_NODShiLtJ_P0019947 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019948.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67697178 67776156 + MGP_NODShiLtJ_P0019948 Abi2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019949.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67697178 67771364 + MGP_NODShiLtJ_P0019949 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019950.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67697183 67724479 + Abi2 protein_coding retained_intron MGP_NODShiLtJ_T0019951.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67727096 67771964 + MGP_NODShiLtJ_P0019951 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019952.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67727220 67771126 + MGP_NODShiLtJ_P0019952 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019953.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67727225 67771289 + MGP_NODShiLtJ_P0019953 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0019954.1 MGP_NODShiLtJ_G0015942.1 mouse_genomes_project 1 67730220 67771510 + MGP_NODShiLtJ_P0019954 Abi2 protein_coding protein_coding MGP_NODShiLtJ_T0000420.1 MGP_NODShiLtJ_G0000357.1 mouse_genomes_project 1 35437234 35440635 + TEC TEC MGP_NODShiLtJ_T0097856.1 MGP_NODShiLtJ_G0036268.1 mouse_genomes_project 1 33611206 33611344 - Gm27362 rRNA rRNA MGP_NODShiLtJ_T0002873.1 MGP_NODShiLtJ_G0002701.1 mouse_genomes_project 1 180906406 180906765 + 4930439D14Rik antisense antisense MGP_NODShiLtJ_T0098579.1 MGP_NODShiLtJ_G0036973.1 mouse_genomes_project 1 196134594 196134701 - Gm23523 snRNA snRNA MGP_NODShiLtJ_T0011858.1 MGP_NODShiLtJ_G0009966.1 mouse_genomes_project 1 40908138 40909928 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021942.1 MGP_NODShiLtJ_G0016357.1 mouse_genomes_project 1 152562072 152606260 + MGP_NODShiLtJ_P0021942 Ren1 protein_coding protein_coding MGP_NODShiLtJ_T0012169.1 MGP_NODShiLtJ_G0010277.1 mouse_genomes_project 1 176959287 176960239 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019604.1 MGP_NODShiLtJ_G0015880.1 mouse_genomes_project 1 59419413 59474878 - MGP_NODShiLtJ_P0019604 1700019A02Rik protein_coding protein_coding MGP_NODShiLtJ_T0019605.1 MGP_NODShiLtJ_G0015880.1 mouse_genomes_project 1 59419436 59474850 - MGP_NODShiLtJ_P0019605 1700019A02Rik protein_coding protein_coding MGP_NODShiLtJ_T0005950.1 MGP_NODShiLtJ_G0004981.1 mouse_genomes_project 1 208751439 208761975 + lincRNA lincRNA MGP_NODShiLtJ_T0005951.1 MGP_NODShiLtJ_G0004981.1 mouse_genomes_project 1 208756147 208761953 + lincRNA lincRNA MGP_NODShiLtJ_T0005952.1 MGP_NODShiLtJ_G0004981.1 mouse_genomes_project 1 208760542 208763004 + lincRNA lincRNA MGP_NODShiLtJ_T0022464.1 MGP_NODShiLtJ_G0016467.1 mouse_genomes_project 1 177113866 177141327 + MGP_NODShiLtJ_P0022464 Shcbp1l protein_coding protein_coding MGP_NODShiLtJ_T0022465.1 MGP_NODShiLtJ_G0016467.1 mouse_genomes_project 1 177113876 177128599 + MGP_NODShiLtJ_P0022465 Shcbp1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022466.1 MGP_NODShiLtJ_G0016467.1 mouse_genomes_project 1 177134026 177137750 + Shcbp1l protein_coding retained_intron MGP_NODShiLtJ_T0012057.1 MGP_NODShiLtJ_G0010165.1 mouse_genomes_project 1 122772467 122773066 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020891.1 MGP_NODShiLtJ_G0016125.1 mouse_genomes_project 1 97929404 97933009 - MGP_NODShiLtJ_P0020891 Alpi protein_coding protein_coding MGP_NODShiLtJ_T0020273.1 MGP_NODShiLtJ_G0016009.1 mouse_genomes_project 1 83672582 83673386 + MGP_NODShiLtJ_P0020273 Arpc2 protein_coding protein_coding MGP_NODShiLtJ_T0020274.1 MGP_NODShiLtJ_G0016009.1 mouse_genomes_project 1 83672994 83705546 + MGP_NODShiLtJ_P0020274 Arpc2 protein_coding protein_coding MGP_NODShiLtJ_T0020275.1 MGP_NODShiLtJ_G0016009.1 mouse_genomes_project 1 83673014 83705324 + MGP_NODShiLtJ_P0020275 Arpc2 protein_coding protein_coding MGP_NODShiLtJ_T0020276.1 MGP_NODShiLtJ_G0016009.1 mouse_genomes_project 1 83673047 83705325 + MGP_NODShiLtJ_P0020276 Arpc2 protein_coding protein_coding MGP_NODShiLtJ_T0021600.1 MGP_NODShiLtJ_G0016285.1 mouse_genomes_project 1 141386944 142288706 - MGP_NODShiLtJ_P0021600 Dpp10 protein_coding protein_coding MGP_NODShiLtJ_T0021601.1 MGP_NODShiLtJ_G0016285.1 mouse_genomes_project 1 141399092 142288310 - MGP_NODShiLtJ_P0021601 Dpp10 protein_coding protein_coding MGP_NODShiLtJ_T0021602.1 MGP_NODShiLtJ_G0016285.1 mouse_genomes_project 1 141748370 141794316 - Dpp10 protein_coding processed_transcript MGP_NODShiLtJ_T0021603.1 MGP_NODShiLtJ_G0016285.1 mouse_genomes_project 1 141765470 142288402 - Dpp10 protein_coding processed_transcript MGP_NODShiLtJ_T0023077.1 MGP_NODShiLtJ_G0016584.1 mouse_genomes_project 1 192556663 192577593 - MGP_NODShiLtJ_P0023077 Lrrc52 protein_coding protein_coding MGP_NODShiLtJ_T0022350.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173776267 173837665 + MGP_NODShiLtJ_P0022350 Tpr protein_coding protein_coding MGP_NODShiLtJ_T0022351.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173776679 173837785 + MGP_NODShiLtJ_P0022351 Tpr protein_coding protein_coding MGP_NODShiLtJ_T0022352.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173776813 173778925 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022353.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173797733 173799701 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022354.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173800525 173802141 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022355.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173811060 173814675 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022356.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173815685 173827097 + MGP_NODShiLtJ_P0022356 Tpr protein_coding protein_coding MGP_NODShiLtJ_T0022357.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173816746 173827094 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022358.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173823767 173831072 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022359.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173825713 173837777 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022360.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173826978 173837777 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022361.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173833767 173837777 + MGP_NODShiLtJ_P0022361 Tpr protein_coding protein_coding MGP_NODShiLtJ_T0022362.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173835304 173837779 + Tpr protein_coding retained_intron MGP_NODShiLtJ_T0022363.1 MGP_NODShiLtJ_G0016447.1 mouse_genomes_project 1 173836720 173837641 + Tpr protein_coding processed_transcript MGP_NODShiLtJ_T0021201.1 MGP_NODShiLtJ_G0016196.1 mouse_genomes_project 1 104364000 104407486 - MGP_NODShiLtJ_P0021201 Ankmy1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0021202.1 MGP_NODShiLtJ_G0016196.1 mouse_genomes_project 1 104372980 104407809 - MGP_NODShiLtJ_P0021202 Ankmy1 protein_coding protein_coding MGP_NODShiLtJ_T0021203.1 MGP_NODShiLtJ_G0016196.1 mouse_genomes_project 1 104372980 104407809 - MGP_NODShiLtJ_P0021203 Ankmy1 protein_coding protein_coding MGP_NODShiLtJ_T0005992.1 MGP_NODShiLtJ_G0005012.1 mouse_genomes_project 1 218901704 218926321 + Gm37168 lincRNA lincRNA MGP_NODShiLtJ_T0019279.1 MGP_NODShiLtJ_G0015816.1 mouse_genomes_project 1 41642732 42119016 - MGP_NODShiLtJ_P0019279 Aff3 protein_coding protein_coding MGP_NODShiLtJ_T0019280.1 MGP_NODShiLtJ_G0015816.1 mouse_genomes_project 1 41642733 42157410 - MGP_NODShiLtJ_P0019280 Aff3 protein_coding protein_coding MGP_NODShiLtJ_T0019281.1 MGP_NODShiLtJ_G0015816.1 mouse_genomes_project 1 41644861 42118972 - MGP_NODShiLtJ_P0019281 Aff3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019282.1 MGP_NODShiLtJ_G0015816.1 mouse_genomes_project 1 41646703 41663947 - Aff3 protein_coding processed_transcript MGP_NODShiLtJ_T0019283.1 MGP_NODShiLtJ_G0015816.1 mouse_genomes_project 1 41810550 42157410 - Aff3 protein_coding processed_transcript MGP_NODShiLtJ_T0019284.1 MGP_NODShiLtJ_G0015816.1 mouse_genomes_project 1 42024666 42157410 - MGP_NODShiLtJ_P0019284 Aff3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020170.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78378386 78538843 - MGP_NODShiLtJ_P0020170 Ikzf2 protein_coding protein_coding MGP_NODShiLtJ_T0020171.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78378931 78540191 - MGP_NODShiLtJ_P0020171 Ikzf2 protein_coding protein_coding MGP_NODShiLtJ_T0020172.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78379117 78537097 - MGP_NODShiLtJ_P0020172 Ikzf2 protein_coding protein_coding MGP_NODShiLtJ_T0020173.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78379117 78537097 - MGP_NODShiLtJ_P0020173 Ikzf2 protein_coding protein_coding MGP_NODShiLtJ_T0020174.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78379117 78540220 - MGP_NODShiLtJ_P0020174 Ikzf2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020175.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78379117 78537097 - MGP_NODShiLtJ_P0020175 Ikzf2 protein_coding protein_coding MGP_NODShiLtJ_T0020176.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78421836 78538257 - MGP_NODShiLtJ_P0020176 Ikzf2 protein_coding protein_coding MGP_NODShiLtJ_T0020177.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78533386 78537476 - Ikzf2 protein_coding retained_intron MGP_NODShiLtJ_T0020178.1 MGP_NODShiLtJ_G0015987.1 mouse_genomes_project 1 78533387 78540086 - Ikzf2 protein_coding retained_intron MGP_NODShiLtJ_T0005594.1 MGP_NODShiLtJ_G0004702.1 mouse_genomes_project 1 15752433 15757169 + D030040B21Rik lincRNA lincRNA MGP_NODShiLtJ_T0019268.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41511094 41592091 - MGP_NODShiLtJ_P0019268 Rev1 protein_coding protein_coding MGP_NODShiLtJ_T0019269.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41511104 41547802 - Rev1 protein_coding retained_intron MGP_NODShiLtJ_T0019270.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41511608 41512559 - Rev1 protein_coding retained_intron MGP_NODShiLtJ_T0019271.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41514827 41516011 - Rev1 protein_coding retained_intron MGP_NODShiLtJ_T0019272.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41525880 41543351 - MGP_NODShiLtJ_P0019272 Rev1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019273.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41529649 41545222 - MGP_NODShiLtJ_P0019273 Rev1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019274.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41534216 41540929 - Rev1 protein_coding processed_transcript MGP_NODShiLtJ_T0019275.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41538645 41543417 - Rev1 protein_coding retained_intron MGP_NODShiLtJ_T0019276.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41552958 41590725 - MGP_NODShiLtJ_P0019276 Rev1 protein_coding protein_coding MGP_NODShiLtJ_T0019277.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41561071 41590741 - MGP_NODShiLtJ_P0019277 Rev1 protein_coding protein_coding MGP_NODShiLtJ_T0019278.1 MGP_NODShiLtJ_G0015815.1 mouse_genomes_project 1 41569837 41592230 - MGP_NODShiLtJ_P0019278 Rev1 protein_coding protein_coding MGP_NODShiLtJ_T0021589.1 MGP_NODShiLtJ_G0016282.1 mouse_genomes_project 1 139143136 139223093 + MGP_NODShiLtJ_P0021589 Ccdc93 protein_coding protein_coding MGP_NODShiLtJ_T0021590.1 MGP_NODShiLtJ_G0016282.1 mouse_genomes_project 1 139143162 139162268 + Ccdc93 protein_coding retained_intron MGP_NODShiLtJ_T0021591.1 MGP_NODShiLtJ_G0016282.1 mouse_genomes_project 1 139143182 139162961 + Ccdc93 protein_coding processed_transcript MGP_NODShiLtJ_T0021592.1 MGP_NODShiLtJ_G0016282.1 mouse_genomes_project 1 139143195 139157231 + Ccdc93 protein_coding processed_transcript MGP_NODShiLtJ_T0021593.1 MGP_NODShiLtJ_G0016282.1 mouse_genomes_project 1 139143197 139216653 + MGP_NODShiLtJ_P0021593 Ccdc93 protein_coding protein_coding MGP_NODShiLtJ_T0021594.1 MGP_NODShiLtJ_G0016282.1 mouse_genomes_project 1 139206263 139214545 + Ccdc93 protein_coding retained_intron MGP_NODShiLtJ_T0009418.1 MGP_NODShiLtJ_G0007551.1 mouse_genomes_project 1 93176550 93176603 + Gm22396 miRNA miRNA MGP_NODShiLtJ_T0098538.1 MGP_NODShiLtJ_G0036932.1 mouse_genomes_project 1 81517457 81517648 + Gm24497 snRNA snRNA MGP_NODShiLtJ_T0005965.1 MGP_NODShiLtJ_G0004990.1 mouse_genomes_project 1 211421033 211428072 - Gm37712 lincRNA lincRNA MGP_NODShiLtJ_T0002825.1 MGP_NODShiLtJ_G0002664.1 mouse_genomes_project 1 137050994 137057271 - Gm27184 antisense antisense MGP_NODShiLtJ_T0011134.1 MGP_NODShiLtJ_G0009267.1 mouse_genomes_project 1 56475880 56476194 + Gm25843 misc_RNA misc_RNA MGP_NODShiLtJ_T0098551.1 MGP_NODShiLtJ_G0036945.1 mouse_genomes_project 1 122544615 122544722 - Gm24267 snRNA snRNA MGP_NODShiLtJ_T0018753.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 11975585 12217577 - MGP_NODShiLtJ_P0018753 Ncoa2 protein_coding protein_coding MGP_NODShiLtJ_T0018754.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 11975639 12219221 - MGP_NODShiLtJ_P0018754 Ncoa2 protein_coding protein_coding MGP_NODShiLtJ_T0018755.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 11978958 12219221 - MGP_NODShiLtJ_P0018755 Ncoa2 protein_coding protein_coding MGP_NODShiLtJ_T0018756.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 11982229 11983544 - Ncoa2 protein_coding processed_transcript MGP_NODShiLtJ_T0018757.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 11983513 11985423 - Ncoa2 protein_coding retained_intron MGP_NODShiLtJ_T0018758.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 11985344 11987921 - Ncoa2 protein_coding retained_intron MGP_NODShiLtJ_T0018759.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 12003622 12219221 - Ncoa2 protein_coding retained_intron MGP_NODShiLtJ_T0018760.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 12005049 12219167 - Ncoa2 protein_coding retained_intron MGP_NODShiLtJ_T0018761.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 12024062 12217567 - Ncoa2 protein_coding retained_intron MGP_NODShiLtJ_T0018762.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 12026395 12219167 - Ncoa2 protein_coding retained_intron MGP_NODShiLtJ_T0018763.1 MGP_NODShiLtJ_G0015709.1 mouse_genomes_project 1 12031894 12138592 - MGP_NODShiLtJ_P0018763 Ncoa2 protein_coding protein_coding MGP_NODShiLtJ_T0023516.1 MGP_NODShiLtJ_G0016710.1 mouse_genomes_project 1 201896399 201946506 + Wdr64 protein_coding processed_transcript MGP_NODShiLtJ_T0023517.1 MGP_NODShiLtJ_G0016710.1 mouse_genomes_project 1 201896399 202022070 + MGP_NODShiLtJ_P0023517 Wdr64 protein_coding protein_coding MGP_NODShiLtJ_T0023518.1 MGP_NODShiLtJ_G0016710.1 mouse_genomes_project 1 201896399 202022070 + MGP_NODShiLtJ_P0023518 Wdr64 protein_coding protein_coding MGP_NODShiLtJ_T0023519.1 MGP_NODShiLtJ_G0016710.1 mouse_genomes_project 1 201896595 202021702 + MGP_NODShiLtJ_P0023519 Wdr64 protein_coding protein_coding MGP_NODShiLtJ_T0023520.1 MGP_NODShiLtJ_G0016710.1 mouse_genomes_project 1 201973084 202022067 + MGP_NODShiLtJ_P0023520 Wdr64 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000589.1 MGP_NODShiLtJ_G0000525.1 mouse_genomes_project 1 142694531 142698196 - TEC TEC MGP_NODShiLtJ_T0011826.1 MGP_NODShiLtJ_G0009934.1 mouse_genomes_project 1 33237734 33238062 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005917.1 MGP_NODShiLtJ_G0004953.1 mouse_genomes_project 1 190034980 190039069 - 4930568G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0005918.1 MGP_NODShiLtJ_G0004953.1 mouse_genomes_project 1 190037573 190063581 - 4930568G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0011882.1 MGP_NODShiLtJ_G0009990.1 mouse_genomes_project 1 49975664 49976390 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000615.1 MGP_NODShiLtJ_G0000551.1 mouse_genomes_project 1 151199926 151205885 + TEC TEC MGP_NODShiLtJ_T0012112.1 MGP_NODShiLtJ_G0010220.1 mouse_genomes_project 1 147135993 147136581 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011960.1 MGP_NODShiLtJ_G0010068.1 mouse_genomes_project 1 72695572 72695951 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024140.1 MGP_NODShiLtJ_G0016832.1 mouse_genomes_project 1 221005923 221006984 - MGP_NODShiLtJ_P0024140 G0s2 protein_coding protein_coding MGP_NODShiLtJ_T0098558.1 MGP_NODShiLtJ_G0036952.1 mouse_genomes_project 1 147159911 147160016 - Gm25384 snRNA snRNA MGP_NODShiLtJ_T0009435.1 MGP_NODShiLtJ_G0007568.1 mouse_genomes_project 1 121134056 121134192 - Mir3473f miRNA miRNA MGP_NODShiLtJ_T0012137.1 MGP_NODShiLtJ_G0010245.1 mouse_genomes_project 1 159987417 159987838 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022040.1 MGP_NODShiLtJ_G0016382.1 mouse_genomes_project 1 153901104 153909861 - MGP_NODShiLtJ_P0022040 Mgat4e protein_coding protein_coding MGP_NODShiLtJ_T0022041.1 MGP_NODShiLtJ_G0016382.1 mouse_genomes_project 1 153901110 153907170 - MGP_NODShiLtJ_P0022041 Mgat4e protein_coding protein_coding MGP_NODShiLtJ_T0022042.1 MGP_NODShiLtJ_G0016382.1 mouse_genomes_project 1 153901120 153907098 - MGP_NODShiLtJ_P0022042 Mgat4e protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023700.1 MGP_NODShiLtJ_G0016743.1 mouse_genomes_project 1 207648357 207660723 - MGP_NODShiLtJ_P0023700 H3f3a protein_coding protein_coding MGP_NODShiLtJ_T0023701.1 MGP_NODShiLtJ_G0016743.1 mouse_genomes_project 1 207650249 207660625 - MGP_NODShiLtJ_P0023701 H3f3a protein_coding protein_coding MGP_NODShiLtJ_T0023702.1 MGP_NODShiLtJ_G0016743.1 mouse_genomes_project 1 207650249 207661034 - MGP_NODShiLtJ_P0023702 H3f3a protein_coding protein_coding MGP_NODShiLtJ_T0023703.1 MGP_NODShiLtJ_G0016743.1 mouse_genomes_project 1 207656838 207660694 - H3f3a protein_coding retained_intron MGP_NODShiLtJ_T0023704.1 MGP_NODShiLtJ_G0016743.1 mouse_genomes_project 1 207657323 207660694 - MGP_NODShiLtJ_P0023704 H3f3a protein_coding protein_coding MGP_NODShiLtJ_T0023705.1 MGP_NODShiLtJ_G0016743.1 mouse_genomes_project 1 207657331 207660694 - MGP_NODShiLtJ_P0023705 H3f3a protein_coding protein_coding MGP_NODShiLtJ_T0020105.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74176804 74414117 + MGP_NODShiLtJ_P0020105 protein_coding protein_coding MGP_NODShiLtJ_T0020106.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74176844 74480601 + MGP_NODShiLtJ_P0020106 protein_coding protein_coding MGP_NODShiLtJ_T0020107.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74176847 74481148 + MGP_NODShiLtJ_P0020107 protein_coding protein_coding MGP_NODShiLtJ_T0020108.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74176996 74341489 + protein_coding processed_transcript MGP_NODShiLtJ_T0020109.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74177075 74200340 + protein_coding processed_transcript MGP_NODShiLtJ_T0020110.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74267976 74481146 + MGP_NODShiLtJ_P0020110 protein_coding protein_coding MGP_NODShiLtJ_T0020111.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74267991 74481146 + MGP_NODShiLtJ_P0020111 protein_coding protein_coding MGP_NODShiLtJ_T0020112.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74340768 74477759 + MGP_NODShiLtJ_P0020112 protein_coding protein_coding MGP_NODShiLtJ_T0020113.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74340885 74440789 + protein_coding retained_intron MGP_NODShiLtJ_T0020114.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74341047 74414791 + protein_coding retained_intron MGP_NODShiLtJ_T0020115.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74341151 74438142 + MGP_NODShiLtJ_P0020115 protein_coding protein_coding MGP_NODShiLtJ_T0020116.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74398150 74481148 + MGP_NODShiLtJ_P0020116 protein_coding protein_coding MGP_NODShiLtJ_T0020117.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74398153 74481148 + MGP_NODShiLtJ_P0020117 protein_coding protein_coding MGP_NODShiLtJ_T0020118.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74414011 74450196 + MGP_NODShiLtJ_P0020118 protein_coding protein_coding MGP_NODShiLtJ_T0020119.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74414201 74449725 + MGP_NODShiLtJ_P0020119 protein_coding protein_coding MGP_NODShiLtJ_T0020120.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74420439 74478527 + protein_coding processed_transcript MGP_NODShiLtJ_T0020121.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74420472 74451046 + MGP_NODShiLtJ_P0020121 protein_coding protein_coding MGP_NODShiLtJ_T0020122.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74420479 74445073 + protein_coding processed_transcript MGP_NODShiLtJ_T0020123.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74420505 74438231 + protein_coding retained_intron MGP_NODShiLtJ_T0020124.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74452055 74464181 + protein_coding processed_transcript MGP_NODShiLtJ_T0020125.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74452905 74476875 + MGP_NODShiLtJ_P0020125 protein_coding protein_coding MGP_NODShiLtJ_T0020126.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74452905 74476875 + MGP_NODShiLtJ_P0020126 protein_coding protein_coding MGP_NODShiLtJ_T0020127.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74453591 74476852 + MGP_NODShiLtJ_P0020127 protein_coding protein_coding MGP_NODShiLtJ_T0020128.1 MGP_NODShiLtJ_G0015978.1 mouse_genomes_project 1 74472253 74478024 + MGP_NODShiLtJ_P0020128 protein_coding protein_coding MGP_NODShiLtJ_T0005849.1 MGP_NODShiLtJ_G0004901.1 mouse_genomes_project 1 155068342 155152444 - Gm38399 lincRNA lincRNA MGP_NODShiLtJ_T0021661.1 MGP_NODShiLtJ_G0016296.1 mouse_genomes_project 1 146467866 146531985 + MGP_NODShiLtJ_P0021661 Rab3gap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0021662.1 MGP_NODShiLtJ_G0016296.1 mouse_genomes_project 1 146467904 146533241 + MGP_NODShiLtJ_P0021662 Rab3gap1 protein_coding protein_coding MGP_NODShiLtJ_T0021663.1 MGP_NODShiLtJ_G0016296.1 mouse_genomes_project 1 146467933 146492999 + Rab3gap1 protein_coding retained_intron MGP_NODShiLtJ_T0021664.1 MGP_NODShiLtJ_G0016296.1 mouse_genomes_project 1 146489883 146494904 + Rab3gap1 protein_coding retained_intron MGP_NODShiLtJ_T0021665.1 MGP_NODShiLtJ_G0016296.1 mouse_genomes_project 1 146512596 146515807 + Rab3gap1 protein_coding retained_intron MGP_NODShiLtJ_T0021666.1 MGP_NODShiLtJ_G0016296.1 mouse_genomes_project 1 146527592 146532286 + Rab3gap1 protein_coding processed_transcript MGP_NODShiLtJ_T0005665.1 MGP_NODShiLtJ_G0004754.1 mouse_genomes_project 1 57568306 57569306 - 1700072G22Rik lincRNA lincRNA MGP_NODShiLtJ_T0018723.1 MGP_NODShiLtJ_G0015704.1 mouse_genomes_project 1 9477293 9480377 + Prex2 protein_coding retained_intron MGP_NODShiLtJ_T0018724.1 MGP_NODShiLtJ_G0015704.1 mouse_genomes_project 1 9477568 9812576 + MGP_NODShiLtJ_P0018724 Prex2 protein_coding protein_coding MGP_NODShiLtJ_T0018725.1 MGP_NODShiLtJ_G0015704.1 mouse_genomes_project 1 9586971 9643886 + Prex2 protein_coding retained_intron MGP_NODShiLtJ_T0018726.1 MGP_NODShiLtJ_G0015704.1 mouse_genomes_project 1 9634652 9654403 + Prex2 protein_coding retained_intron MGP_NODShiLtJ_T0018729.1 MGP_NODShiLtJ_G0015704.1 mouse_genomes_project 1 9774610 9807488 + MGP_NODShiLtJ_P0018729 Prex2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018730.1 MGP_NODShiLtJ_G0015704.1 mouse_genomes_project 1 9792919 9807687 + MGP_NODShiLtJ_P0018730 Prex2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005793.1 MGP_NODShiLtJ_G0004856.1 mouse_genomes_project 1 111531316 111548488 + Gm7967 lincRNA lincRNA MGP_NODShiLtJ_T0005794.1 MGP_NODShiLtJ_G0004856.1 mouse_genomes_project 1 111531317 111548248 + Gm7967 lincRNA lincRNA MGP_NODShiLtJ_T0000706.1 MGP_NODShiLtJ_G0000640.1 mouse_genomes_project 1 187160457 187162721 + TEC TEC MGP_NODShiLtJ_T0012236.1 MGP_NODShiLtJ_G0010344.1 mouse_genomes_project 1 210369140 210369532 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019319.1 MGP_NODShiLtJ_G0015825.1 mouse_genomes_project 1 43096034 43122244 - MGP_NODShiLtJ_P0019319 Rnf149 protein_coding protein_coding MGP_NODShiLtJ_T0019320.1 MGP_NODShiLtJ_G0015825.1 mouse_genomes_project 1 43097336 43122195 - MGP_NODShiLtJ_P0019320 Rnf149 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019321.1 MGP_NODShiLtJ_G0015825.1 mouse_genomes_project 1 43100466 43103614 - Rnf149 protein_coding retained_intron MGP_NODShiLtJ_T0019322.1 MGP_NODShiLtJ_G0015825.1 mouse_genomes_project 1 43109958 43122142 - MGP_NODShiLtJ_P0019322 Rnf149 protein_coding protein_coding MGP_NODShiLtJ_T0000691.1 MGP_NODShiLtJ_G0000625.1 mouse_genomes_project 1 184686483 184687635 - TEC TEC MGP_NODShiLtJ_T0023132.1 MGP_NODShiLtJ_G0016601.1 mouse_genomes_project 1 196021163 196059392 + MGP_NODShiLtJ_P0023132 Olfml2b protein_coding protein_coding MGP_NODShiLtJ_T0002953.1 MGP_NODShiLtJ_G0002763.1 mouse_genomes_project 1 219725246 219732410 + Gm26879 antisense antisense MGP_NODShiLtJ_T0005871.1 MGP_NODShiLtJ_G0004918.1 mouse_genomes_project 1 172168463 172208499 + lincRNA lincRNA MGP_NODShiLtJ_T0011790.1 MGP_NODShiLtJ_G0009898.1 mouse_genomes_project 1 17344029 17345428 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023475.1 MGP_NODShiLtJ_G0016694.1 mouse_genomes_project 1 200133777 200134724 + MGP_NODShiLtJ_P0023475 Olfr424 protein_coding protein_coding MGP_NODShiLtJ_T0022921.1 MGP_NODShiLtJ_G0016550.1 mouse_genomes_project 1 189019700 189089742 + MGP_NODShiLtJ_P0022921 F5 protein_coding protein_coding MGP_NODShiLtJ_T0011786.1 MGP_NODShiLtJ_G0009894.1 mouse_genomes_project 1 15862120 15876205 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002775.1 MGP_NODShiLtJ_G0002628.1 mouse_genomes_project 1 71790062 71802172 + Gm13748 antisense antisense MGP_NODShiLtJ_T0005616.1 MGP_NODShiLtJ_G0004723.1 mouse_genomes_project 1 37563931 37586843 - lincRNA lincRNA MGP_NODShiLtJ_T0005617.1 MGP_NODShiLtJ_G0004723.1 mouse_genomes_project 1 37576855 37587165 - lincRNA lincRNA MGP_NODShiLtJ_T0016898.1 MGP_NODShiLtJ_G0014979.1 mouse_genomes_project 1 110879448 110883814 - B230216N24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0016899.1 MGP_NODShiLtJ_G0014979.1 mouse_genomes_project 1 110879459 110898073 - B230216N24Rik processed_transcript sense_intronic MGP_NODShiLtJ_T0016900.1 MGP_NODShiLtJ_G0014979.1 mouse_genomes_project 1 110880049 110898107 - B230216N24Rik processed_transcript sense_intronic MGP_NODShiLtJ_T0016901.1 MGP_NODShiLtJ_G0014979.1 mouse_genomes_project 1 110880200 110907965 - B230216N24Rik processed_transcript sense_intronic MGP_NODShiLtJ_T0016902.1 MGP_NODShiLtJ_G0014979.1 mouse_genomes_project 1 110896130 110898068 - B230216N24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0011138.1 MGP_NODShiLtJ_G0009271.1 mouse_genomes_project 1 82744481 82744635 + Gm27315 misc_RNA misc_RNA MGP_NODShiLtJ_T0005701.1 MGP_NODShiLtJ_G0004781.1 mouse_genomes_project 1 71734726 71739842 + Gm26649 lincRNA lincRNA MGP_NODShiLtJ_T0012077.1 MGP_NODShiLtJ_G0010185.1 mouse_genomes_project 1 130313182 130313718 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011843.1 MGP_NODShiLtJ_G0009951.1 mouse_genomes_project 1 37639344 37639637 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098553.1 MGP_NODShiLtJ_G0036947.1 mouse_genomes_project 1 135939834 135939959 - Gm22710 snRNA snRNA MGP_NODShiLtJ_T0002868.1 MGP_NODShiLtJ_G0002696.1 mouse_genomes_project 1 177402617 177404815 - Gm29529 antisense antisense MGP_NODShiLtJ_T0002736.1 MGP_NODShiLtJ_G0002598.1 mouse_genomes_project 1 41377988 41398435 + Gm15457 antisense antisense MGP_NODShiLtJ_T0000580.1 MGP_NODShiLtJ_G0000516.1 mouse_genomes_project 1 140417715 140418833 + TEC TEC MGP_NODShiLtJ_T0023383.1 MGP_NODShiLtJ_G0016655.1 mouse_genomes_project 1 197906678 197939646 + MGP_NODShiLtJ_P0023383 Kcnj10 protein_coding protein_coding MGP_NODShiLtJ_T0021204.1 MGP_NODShiLtJ_G0016197.1 mouse_genomes_project 1 104412856 104414311 + MGP_NODShiLtJ_P0021204 Dusp28 protein_coding protein_coding MGP_NODShiLtJ_T0023580.1 MGP_NODShiLtJ_G0016721.1 mouse_genomes_project 1 204871838 204875044 + Cox20 protein_coding retained_intron MGP_NODShiLtJ_T0023581.1 MGP_NODShiLtJ_G0016721.1 mouse_genomes_project 1 204871838 204875402 + MGP_NODShiLtJ_P0023581 Cox20 protein_coding protein_coding MGP_NODShiLtJ_T0000382.1 MGP_NODShiLtJ_G0000320.1 mouse_genomes_project 1 13756383 13760704 + TEC TEC MGP_NODShiLtJ_T0023470.1 MGP_NODShiLtJ_G0016690.1 mouse_genomes_project 1 200047914 200048868 + MGP_NODShiLtJ_P0023470 Olfr430 protein_coding protein_coding MGP_NODShiLtJ_T0021571.1 MGP_NODShiLtJ_G0016277.1 mouse_genomes_project 1 137832563 137910469 - MGP_NODShiLtJ_P0021571 Steap3 protein_coding protein_coding MGP_NODShiLtJ_T0021572.1 MGP_NODShiLtJ_G0016277.1 mouse_genomes_project 1 137868327 137916297 - MGP_NODShiLtJ_P0021572 Steap3 protein_coding protein_coding MGP_NODShiLtJ_T0021573.1 MGP_NODShiLtJ_G0016277.1 mouse_genomes_project 1 137870589 137915636 - MGP_NODShiLtJ_P0021573 Steap3 protein_coding protein_coding MGP_NODShiLtJ_T0021574.1 MGP_NODShiLtJ_G0016277.1 mouse_genomes_project 1 137871604 137915443 - MGP_NODShiLtJ_P0021574 Steap3 protein_coding protein_coding MGP_NODShiLtJ_T0012084.1 MGP_NODShiLtJ_G0010192.1 mouse_genomes_project 1 135960370 135961358 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098517.1 MGP_NODShiLtJ_G0036911.1 mouse_genomes_project 1 36280368 36280468 + Gm25792 snRNA snRNA MGP_NODShiLtJ_T0099752.1 MGP_NODShiLtJ_G0038146.1 mouse_genomes_project 1 43118582 43118712 - Gm23722 snoRNA snoRNA MGP_NODShiLtJ_T0024155.1 MGP_NODShiLtJ_G0016835.1 mouse_genomes_project 1 222825086 222849438 + MGP_NODShiLtJ_P0024155 Cd34 protein_coding protein_coding MGP_NODShiLtJ_T0024156.1 MGP_NODShiLtJ_G0016835.1 mouse_genomes_project 1 222825142 222849438 + MGP_NODShiLtJ_P0024156 Cd34 protein_coding protein_coding MGP_NODShiLtJ_T0024157.1 MGP_NODShiLtJ_G0016835.1 mouse_genomes_project 1 222825172 222838919 + Cd34 protein_coding retained_intron MGP_NODShiLtJ_T0024158.1 MGP_NODShiLtJ_G0016835.1 mouse_genomes_project 1 222825218 222827497 + Cd34 protein_coding retained_intron MGP_NODShiLtJ_T0024159.1 MGP_NODShiLtJ_G0016835.1 mouse_genomes_project 1 222825262 222846709 + MGP_NODShiLtJ_P0024159 Cd34 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005968.1 MGP_NODShiLtJ_G0004992.1 mouse_genomes_project 1 211679278 211699771 - Gm37800 lincRNA lincRNA MGP_NODShiLtJ_T0005969.1 MGP_NODShiLtJ_G0004992.1 mouse_genomes_project 1 211679916 211688285 - Gm37800 lincRNA lincRNA MGP_NODShiLtJ_T0011150.1 MGP_NODShiLtJ_G0009283.1 mouse_genomes_project 1 211950508 211950783 - Gm23780 misc_RNA misc_RNA MGP_NODShiLtJ_T0016917.1 MGP_NODShiLtJ_G0014983.1 mouse_genomes_project 1 155616362 155621344 - Gm15850 processed_transcript processed_transcript MGP_NODShiLtJ_T0016918.1 MGP_NODShiLtJ_G0014983.1 mouse_genomes_project 1 155617903 155621332 - Gm15850 processed_transcript processed_transcript MGP_NODShiLtJ_T0016919.1 MGP_NODShiLtJ_G0014983.1 mouse_genomes_project 1 155617903 155621332 - Gm15850 processed_transcript processed_transcript MGP_NODShiLtJ_T0016920.1 MGP_NODShiLtJ_G0014983.1 mouse_genomes_project 1 155617903 155621332 - Gm15850 processed_transcript processed_transcript MGP_NODShiLtJ_T0009429.1 MGP_NODShiLtJ_G0007562.1 mouse_genomes_project 1 104877850 104877914 + Mir6902 miRNA miRNA MGP_NODShiLtJ_T0005909.1 MGP_NODShiLtJ_G0004947.1 mouse_genomes_project 1 189409433 189420999 + Gm26685 lincRNA lincRNA MGP_NODShiLtJ_T0023869.1 MGP_NODShiLtJ_G0016782.1 mouse_genomes_project 1 212317216 212409847 + MGP_NODShiLtJ_P0023869 Rab3gap2 protein_coding protein_coding MGP_NODShiLtJ_T0023870.1 MGP_NODShiLtJ_G0016782.1 mouse_genomes_project 1 212317216 212407273 + MGP_NODShiLtJ_P0023870 Rab3gap2 protein_coding protein_coding MGP_NODShiLtJ_T0023871.1 MGP_NODShiLtJ_G0016782.1 mouse_genomes_project 1 212317277 212319553 + Rab3gap2 protein_coding retained_intron MGP_NODShiLtJ_T0023872.1 MGP_NODShiLtJ_G0016782.1 mouse_genomes_project 1 212383844 212409832 + Rab3gap2 protein_coding retained_intron MGP_NODShiLtJ_T0023873.1 MGP_NODShiLtJ_G0016782.1 mouse_genomes_project 1 212384007 212407811 + Rab3gap2 protein_coding retained_intron MGP_NODShiLtJ_T0023874.1 MGP_NODShiLtJ_G0016782.1 mouse_genomes_project 1 212400882 212404783 + Rab3gap2 protein_coding retained_intron MGP_NODShiLtJ_T0012078.1 MGP_NODShiLtJ_G0010186.1 mouse_genomes_project 1 130335914 130336650 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021448.1 MGP_NODShiLtJ_G0016252.1 mouse_genomes_project 1 122078137 122091120 + MGP_NODShiLtJ_P0021448 Serpinb11 protein_coding protein_coding MGP_NODShiLtJ_T0021449.1 MGP_NODShiLtJ_G0016252.1 mouse_genomes_project 1 122078868 122097413 + MGP_NODShiLtJ_P0021449 Serpinb11 protein_coding protein_coding MGP_NODShiLtJ_T0000522.1 MGP_NODShiLtJ_G0000458.1 mouse_genomes_project 1 90738276 90740104 - TEC TEC MGP_NODShiLtJ_T0098515.1 MGP_NODShiLtJ_G0036909.1 mouse_genomes_project 1 35472436 35472499 - Gm24732 snRNA snRNA MGP_NODShiLtJ_T0024022.1 MGP_NODShiLtJ_G0016811.1 mouse_genomes_project 1 218946289 218959144 - MGP_NODShiLtJ_P0024022 Nenf protein_coding protein_coding MGP_NODShiLtJ_T0000470.1 MGP_NODShiLtJ_G0000406.1 mouse_genomes_project 1 66812504 66814376 - TEC TEC MGP_NODShiLtJ_T0011757.1 MGP_NODShiLtJ_G0009865.1 mouse_genomes_project 1 5527284 5529380 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011897.1 MGP_NODShiLtJ_G0010005.1 mouse_genomes_project 1 54662511 54662726 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018873.1 MGP_NODShiLtJ_G0015738.1 mouse_genomes_project 1 20685283 20702762 - MGP_NODShiLtJ_P0018873 Mcm3 protein_coding protein_coding MGP_NODShiLtJ_T0018874.1 MGP_NODShiLtJ_G0015738.1 mouse_genomes_project 1 20685288 20702710 - Mcm3 protein_coding retained_intron MGP_NODShiLtJ_T0018875.1 MGP_NODShiLtJ_G0015738.1 mouse_genomes_project 1 20685321 20686036 - Mcm3 protein_coding retained_intron MGP_NODShiLtJ_T0018876.1 MGP_NODShiLtJ_G0015738.1 mouse_genomes_project 1 20685480 20687232 - Mcm3 protein_coding retained_intron MGP_NODShiLtJ_T0018877.1 MGP_NODShiLtJ_G0015738.1 mouse_genomes_project 1 20686995 20688239 - Mcm3 protein_coding retained_intron MGP_NODShiLtJ_T0011972.1 MGP_NODShiLtJ_G0010080.1 mouse_genomes_project 1 77923814 77924200 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005755.1 MGP_NODShiLtJ_G0004820.1 mouse_genomes_project 1 95777885 96276312 - lincRNA lincRNA MGP_NODShiLtJ_T0002954.1 MGP_NODShiLtJ_G0002764.1 mouse_genomes_project 1 219774283 219790021 + Gm10516 antisense antisense MGP_NODShiLtJ_T0002955.1 MGP_NODShiLtJ_G0002764.1 mouse_genomes_project 1 219774727 219784415 + Gm10516 antisense antisense MGP_NODShiLtJ_T0005934.1 MGP_NODShiLtJ_G0004968.1 mouse_genomes_project 1 201764744 201769385 + Gm36307 lincRNA lincRNA MGP_NODShiLtJ_T0020244.1 MGP_NODShiLtJ_G0016003.1 mouse_genomes_project 1 82175715 82194646 - MGP_NODShiLtJ_P0020244 Igfbp5 protein_coding protein_coding MGP_NODShiLtJ_T0020245.1 MGP_NODShiLtJ_G0016003.1 mouse_genomes_project 1 82175848 82194023 - Igfbp5 protein_coding processed_transcript MGP_NODShiLtJ_T0022666.1 MGP_NODShiLtJ_G0016502.1 mouse_genomes_project 1 181542655 181577021 + MGP_NODShiLtJ_P0022666 BC026585 protein_coding protein_coding MGP_NODShiLtJ_T0022667.1 MGP_NODShiLtJ_G0016502.1 mouse_genomes_project 1 181542674 181576904 + MGP_NODShiLtJ_P0022667 BC026585 protein_coding protein_coding MGP_NODShiLtJ_T0022668.1 MGP_NODShiLtJ_G0016502.1 mouse_genomes_project 1 181548297 181556981 + MGP_NODShiLtJ_P0022668 BC026585 protein_coding protein_coding MGP_NODShiLtJ_T0022669.1 MGP_NODShiLtJ_G0016502.1 mouse_genomes_project 1 181558562 181581031 + MGP_NODShiLtJ_P0022669 BC026585 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000610.1 MGP_NODShiLtJ_G0000546.1 mouse_genomes_project 1 149676413 149678091 - TEC TEC MGP_NODShiLtJ_T0000461.1 MGP_NODShiLtJ_G0000397.1 mouse_genomes_project 1 60751723 60754313 - TEC TEC MGP_NODShiLtJ_T0005874.1 MGP_NODShiLtJ_G0004920.1 mouse_genomes_project 1 173521618 173528221 - Ptgs2os2 lincRNA lincRNA MGP_NODShiLtJ_T0019048.1 MGP_NODShiLtJ_G0015775.1 mouse_genomes_project 1 37546175 37547469 + Ptpn18 protein_coding retained_intron MGP_NODShiLtJ_T0019049.1 MGP_NODShiLtJ_G0015775.1 mouse_genomes_project 1 37546178 37568135 + MGP_NODShiLtJ_P0019049 Ptpn18 protein_coding protein_coding MGP_NODShiLtJ_T0019050.1 MGP_NODShiLtJ_G0015775.1 mouse_genomes_project 1 37546190 37566280 + MGP_NODShiLtJ_P0019050 Ptpn18 protein_coding protein_coding MGP_NODShiLtJ_T0019051.1 MGP_NODShiLtJ_G0015775.1 mouse_genomes_project 1 37546205 37566279 + Ptpn18 protein_coding retained_intron MGP_NODShiLtJ_T0019052.1 MGP_NODShiLtJ_G0015775.1 mouse_genomes_project 1 37549689 37553254 + Ptpn18 protein_coding retained_intron MGP_NODShiLtJ_T0019053.1 MGP_NODShiLtJ_G0015775.1 mouse_genomes_project 1 37567070 37570110 + MGP_NODShiLtJ_P0019053 Ptpn18 protein_coding protein_coding MGP_NODShiLtJ_T0019054.1 MGP_NODShiLtJ_G0015775.1 mouse_genomes_project 1 37568849 37570110 + Ptpn18 protein_coding processed_transcript MGP_NODShiLtJ_T0009458.1 MGP_NODShiLtJ_G0007591.1 mouse_genomes_project 1 190709872 190710015 + Gm44458 miRNA miRNA MGP_NODShiLtJ_T0101511.1 MGP_NODShiLtJ_G0039681.1 mouse_genomes_project 1 199748540 199946596 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012220.1 MGP_NODShiLtJ_G0010328.1 mouse_genomes_project 1 203135622 203135951 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011842.1 MGP_NODShiLtJ_G0009950.1 mouse_genomes_project 1 37446425 37448056 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011881.1 MGP_NODShiLtJ_G0009989.1 mouse_genomes_project 1 49878891 49879864 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000685.1 MGP_NODShiLtJ_G0000619.1 mouse_genomes_project 1 182772684 182775286 + TEC TEC MGP_NODShiLtJ_T0099805.1 MGP_NODShiLtJ_G0038199.1 mouse_genomes_project 1 177128740 177128880 + Gm25588 snoRNA snoRNA MGP_NODShiLtJ_T0005662.1 MGP_NODShiLtJ_G0004751.1 mouse_genomes_project 1 56850315 56852642 + Gm28321 lincRNA lincRNA MGP_NODShiLtJ_T0099781.1 MGP_NODShiLtJ_G0038175.1 mouse_genomes_project 1 113587423 113587555 - Gm23602 snoRNA snoRNA MGP_NODShiLtJ_T0098596.1 MGP_NODShiLtJ_G0036990.1 mouse_genomes_project 1 219444067 219444181 - Gm26203 snRNA snRNA MGP_NODShiLtJ_T0009375.1 MGP_NODShiLtJ_G0007508.1 mouse_genomes_project 1 6710694 6710804 - Gm23358 miRNA miRNA MGP_NODShiLtJ_T0099820.1 MGP_NODShiLtJ_G0038214.1 mouse_genomes_project 1 187808680 187808814 - Gm22671 snoRNA snoRNA MGP_NODShiLtJ_T0101009.1 MGP_NODShiLtJ_G0039398.1 mouse_genomes_project 1 132758881 132777624 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101010.1 MGP_NODShiLtJ_G0039398.1 mouse_genomes_project 1 132759296 132760483 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101011.1 MGP_NODShiLtJ_G0039398.1 mouse_genomes_project 1 132759724 132777629 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0005896.1 MGP_NODShiLtJ_G0004937.1 mouse_genomes_project 1 183397953 183435012 + 4930562F17Rik lincRNA lincRNA MGP_NODShiLtJ_T0022210.1 MGP_NODShiLtJ_G0016415.1 mouse_genomes_project 1 156163361 156168514 + MGP_NODShiLtJ_P0022210 Zfp281 protein_coding protein_coding MGP_NODShiLtJ_T0022211.1 MGP_NODShiLtJ_G0016415.1 mouse_genomes_project 1 156163361 156168514 + MGP_NODShiLtJ_P0022211 Zfp281 protein_coding protein_coding MGP_NODShiLtJ_T0000553.1 MGP_NODShiLtJ_G0000489.1 mouse_genomes_project 1 102254283 102255120 - TEC TEC MGP_NODShiLtJ_T0016881.1 MGP_NODShiLtJ_G0014971.1 mouse_genomes_project 1 72422202 72432903 - 2810408I11Rik processed_transcript antisense MGP_NODShiLtJ_T0016882.1 MGP_NODShiLtJ_G0014971.1 mouse_genomes_project 1 72425615 72432852 - 2810408I11Rik processed_transcript antisense MGP_NODShiLtJ_T0016883.1 MGP_NODShiLtJ_G0014971.1 mouse_genomes_project 1 72431367 72432872 - 2810408I11Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018647.1 MGP_NODShiLtJ_G0015694.1 mouse_genomes_project 1 8042502 8077815 - MGP_NODShiLtJ_P0018647 Mybl1 protein_coding protein_coding MGP_NODShiLtJ_T0018648.1 MGP_NODShiLtJ_G0015694.1 mouse_genomes_project 1 8049622 8053051 - Mybl1 protein_coding retained_intron MGP_NODShiLtJ_T0018649.1 MGP_NODShiLtJ_G0015694.1 mouse_genomes_project 1 8052712 8058366 - Mybl1 protein_coding retained_intron MGP_NODShiLtJ_T0018650.1 MGP_NODShiLtJ_G0015694.1 mouse_genomes_project 1 8056752 8077515 - MGP_NODShiLtJ_P0018650 Mybl1 protein_coding protein_coding MGP_NODShiLtJ_T0101494.1 MGP_NODShiLtJ_G0039664.1 mouse_genomes_project 1 119020214 119021574 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0022797.1 MGP_NODShiLtJ_G0016522.1 mouse_genomes_project 1 185976072 185999015 + MGP_NODShiLtJ_P0022797 Tnfsf4 protein_coding protein_coding MGP_NODShiLtJ_T0016930.1 MGP_NODShiLtJ_G0014989.1 mouse_genomes_project 1 183944570 184022324 + Gm10530 processed_transcript sense_intronic MGP_NODShiLtJ_T0016931.1 MGP_NODShiLtJ_G0014989.1 mouse_genomes_project 1 184019109 184022324 + Gm10530 processed_transcript lincRNA MGP_NODShiLtJ_T0000714.1 MGP_NODShiLtJ_G0000648.1 mouse_genomes_project 1 190593663 190594472 + TEC TEC MGP_NODShiLtJ_T0002958.1 MGP_NODShiLtJ_G0002767.1 mouse_genomes_project 1 220926884 220951325 + 4930570N18Rik antisense antisense MGP_NODShiLtJ_T0097865.1 MGP_NODShiLtJ_G0036277.1 mouse_genomes_project 1 119325589 119325701 - n-R5s216 rRNA rRNA MGP_NODShiLtJ_T0012146.1 MGP_NODShiLtJ_G0010254.1 mouse_genomes_project 1 166669001 166669994 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020146.1 MGP_NODShiLtJ_G0015982.1 mouse_genomes_project 1 74916102 74948362 - MGP_NODShiLtJ_P0020146 Acadl protein_coding protein_coding MGP_NODShiLtJ_T0020147.1 MGP_NODShiLtJ_G0015982.1 mouse_genomes_project 1 74930085 74943435 - Acadl protein_coding processed_transcript MGP_NODShiLtJ_T0101507.1 MGP_NODShiLtJ_G0039677.1 mouse_genomes_project 1 198748908 198749160 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012016.1 MGP_NODShiLtJ_G0010124.1 mouse_genomes_project 1 99996048 99996632 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021156.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103389344 103609900 - MGP_NODShiLtJ_P0021156 Hdac4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0021157.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103389344 103642365 - MGP_NODShiLtJ_P0021157 Hdac4 protein_coding protein_coding MGP_NODShiLtJ_T0021158.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103393313 103610016 - MGP_NODShiLtJ_P0021158 Hdac4 protein_coding protein_coding MGP_NODShiLtJ_T0021159.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103393512 103467356 - Hdac4 protein_coding processed_transcript MGP_NODShiLtJ_T0021160.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103393757 103395411 - Hdac4 protein_coding retained_intron MGP_NODShiLtJ_T0021161.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103415930 103436063 - MGP_NODShiLtJ_P0021161 Hdac4 protein_coding protein_coding MGP_NODShiLtJ_T0021162.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103449598 103453106 - Hdac4 protein_coding retained_intron MGP_NODShiLtJ_T0021163.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103464174 103467361 - Hdac4 protein_coding retained_intron MGP_NODShiLtJ_T0021164.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103489645 103642321 - MGP_NODShiLtJ_P0021164 Hdac4 protein_coding protein_coding MGP_NODShiLtJ_T0021165.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103489656 103575785 - Hdac4 protein_coding processed_transcript MGP_NODShiLtJ_T0021166.1 MGP_NODShiLtJ_G0016183.1 mouse_genomes_project 1 103489740 103575785 - Hdac4 protein_coding processed_transcript MGP_NODShiLtJ_T0022895.1 MGP_NODShiLtJ_G0016544.1 mouse_genomes_project 1 188756159 188782721 + MGP_NODShiLtJ_P0022895 Scyl3 protein_coding protein_coding MGP_NODShiLtJ_T0022896.1 MGP_NODShiLtJ_G0016544.1 mouse_genomes_project 1 188756819 188783145 + MGP_NODShiLtJ_P0022896 Scyl3 protein_coding protein_coding MGP_NODShiLtJ_T0022897.1 MGP_NODShiLtJ_G0016544.1 mouse_genomes_project 1 188756844 188783129 + MGP_NODShiLtJ_P0022897 Scyl3 protein_coding protein_coding MGP_NODShiLtJ_T0022898.1 MGP_NODShiLtJ_G0016544.1 mouse_genomes_project 1 188756859 188783128 + MGP_NODShiLtJ_P0022898 Scyl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022899.1 MGP_NODShiLtJ_G0016544.1 mouse_genomes_project 1 188769133 188783133 + MGP_NODShiLtJ_P0022899 Scyl3 protein_coding protein_coding MGP_NODShiLtJ_T0022900.1 MGP_NODShiLtJ_G0016544.1 mouse_genomes_project 1 188771789 188772863 + Scyl3 protein_coding processed_transcript MGP_NODShiLtJ_T0022902.1 MGP_NODShiLtJ_G0016544.1 mouse_genomes_project 1 188779231 188781821 + Scyl3 protein_coding retained_intron MGP_NODShiLtJ_T0020363.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84070632 84104981 + MGP_NODShiLtJ_P0020363 Stk36 protein_coding protein_coding MGP_NODShiLtJ_T0020364.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84070667 84104978 + Stk36 protein_coding retained_intron MGP_NODShiLtJ_T0020365.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84070690 84102187 + MGP_NODShiLtJ_P0020365 Stk36 protein_coding protein_coding MGP_NODShiLtJ_T0020366.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84070701 84075686 + MGP_NODShiLtJ_P0020366 Stk36 protein_coding protein_coding MGP_NODShiLtJ_T0020367.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84070826 84104130 + MGP_NODShiLtJ_P0020367 Stk36 protein_coding protein_coding MGP_NODShiLtJ_T0020368.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84073370 84078565 + MGP_NODShiLtJ_P0020368 Stk36 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020369.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84090453 84094015 + Stk36 protein_coding retained_intron MGP_NODShiLtJ_T0020370.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84090930 84104173 + Stk36 protein_coding processed_transcript MGP_NODShiLtJ_T0020371.1 MGP_NODShiLtJ_G0016024.1 mouse_genomes_project 1 84094568 84104981 + Stk36 protein_coding retained_intron MGP_NODShiLtJ_T0005786.1 MGP_NODShiLtJ_G0004850.1 mouse_genomes_project 1 107838879 107855685 - 4930598F16Rik lincRNA lincRNA MGP_NODShiLtJ_T0020135.1 MGP_NODShiLtJ_G0015980.1 mouse_genomes_project 1 74761319 74793599 + MGP_NODShiLtJ_P0020135 Rpe protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020136.1 MGP_NODShiLtJ_G0015980.1 mouse_genomes_project 1 74761319 74780629 + MGP_NODShiLtJ_P0020136 Rpe protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020137.1 MGP_NODShiLtJ_G0015980.1 mouse_genomes_project 1 74761319 74793599 + MGP_NODShiLtJ_P0020137 Rpe protein_coding protein_coding MGP_NODShiLtJ_T0020138.1 MGP_NODShiLtJ_G0015980.1 mouse_genomes_project 1 74761319 74793599 + MGP_NODShiLtJ_P0020138 Rpe protein_coding protein_coding MGP_NODShiLtJ_T0020139.1 MGP_NODShiLtJ_G0015980.1 mouse_genomes_project 1 74761395 74783197 + MGP_NODShiLtJ_P0020139 Rpe protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020650.1 MGP_NODShiLtJ_G0016071.1 mouse_genomes_project 1 89468800 89533956 - MGP_NODShiLtJ_P0020650 Ap1s3 protein_coding protein_coding MGP_NODShiLtJ_T0020651.1 MGP_NODShiLtJ_G0016071.1 mouse_genomes_project 1 89470916 89533949 - MGP_NODShiLtJ_P0020651 Ap1s3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020652.1 MGP_NODShiLtJ_G0016071.1 mouse_genomes_project 1 89471257 89533952 - MGP_NODShiLtJ_P0020652 Ap1s3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023460.1 MGP_NODShiLtJ_G0016683.1 mouse_genomes_project 1 199700439 199708543 - protein_coding processed_transcript MGP_NODShiLtJ_T0020229.1 MGP_NODShiLtJ_G0015997.1 mouse_genomes_project 1 81590873 81683852 + MGP_NODShiLtJ_P0020229 Xrcc5 protein_coding protein_coding MGP_NODShiLtJ_T0101464.1 MGP_NODShiLtJ_G0039634.1 mouse_genomes_project 1 21193101 21199769 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011821.1 MGP_NODShiLtJ_G0009929.1 mouse_genomes_project 1 30247811 30248054 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021619.1 MGP_NODShiLtJ_G0016288.1 mouse_genomes_project 1 144094916 144314463 + MGP_NODShiLtJ_P0021619 Gpr39 protein_coding protein_coding MGP_NODShiLtJ_T0021620.1 MGP_NODShiLtJ_G0016288.1 mouse_genomes_project 1 144275247 144313774 + Gpr39 protein_coding processed_transcript MGP_NODShiLtJ_T0021185.1 MGP_NODShiLtJ_G0016190.1 mouse_genomes_project 1 104084282 104085280 + MGP_NODShiLtJ_P0021185 Olfr1411 protein_coding protein_coding MGP_NODShiLtJ_T0011911.1 MGP_NODShiLtJ_G0010019.1 mouse_genomes_project 1 58721615 58722078 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024013.1 MGP_NODShiLtJ_G0016808.1 mouse_genomes_project 1 218722715 218736165 + Batf3 protein_coding processed_transcript MGP_NODShiLtJ_T0024014.1 MGP_NODShiLtJ_G0016808.1 mouse_genomes_project 1 218722748 218736624 + Batf3 protein_coding processed_transcript MGP_NODShiLtJ_T0024015.1 MGP_NODShiLtJ_G0016808.1 mouse_genomes_project 1 218723193 218736622 + MGP_NODShiLtJ_P0024015 Batf3 protein_coding protein_coding MGP_NODShiLtJ_T0024016.1 MGP_NODShiLtJ_G0016808.1 mouse_genomes_project 1 218723246 218736165 + Batf3 protein_coding processed_transcript MGP_NODShiLtJ_T0024017.1 MGP_NODShiLtJ_G0016808.1 mouse_genomes_project 1 218725321 218736588 + Batf3 protein_coding retained_intron MGP_NODShiLtJ_T0021048.1 MGP_NODShiLtJ_G0016162.1 mouse_genomes_project 1 101374175 101494455 - MGP_NODShiLtJ_P0021048 Iqca protein_coding protein_coding MGP_NODShiLtJ_T0021049.1 MGP_NODShiLtJ_G0016162.1 mouse_genomes_project 1 101374178 101427176 - Iqca protein_coding processed_transcript MGP_NODShiLtJ_T0021050.1 MGP_NODShiLtJ_G0016162.1 mouse_genomes_project 1 101374669 101494229 - MGP_NODShiLtJ_P0021050 Iqca protein_coding unknown_likely_coding MGP_NODShiLtJ_T0021051.1 MGP_NODShiLtJ_G0016162.1 mouse_genomes_project 1 101391797 101402830 - MGP_NODShiLtJ_P0021051 Iqca protein_coding protein_coding MGP_NODShiLtJ_T0021052.1 MGP_NODShiLtJ_G0016162.1 mouse_genomes_project 1 101465378 101494455 - Iqca protein_coding processed_transcript MGP_NODShiLtJ_T0023913.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492569 214513669 + Gpatch2 protein_coding processed_transcript MGP_NODShiLtJ_T0023914.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492572 214641934 + MGP_NODShiLtJ_P0023914 Gpatch2 protein_coding protein_coding MGP_NODShiLtJ_T0023915.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492572 214639271 + MGP_NODShiLtJ_P0023915 Gpatch2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023916.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492583 214642206 + MGP_NODShiLtJ_P0023916 Gpatch2 protein_coding protein_coding MGP_NODShiLtJ_T0023917.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492599 214585469 + Gpatch2 protein_coding retained_intron MGP_NODShiLtJ_T0023918.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492605 214512255 + MGP_NODShiLtJ_P0023918 Gpatch2 protein_coding protein_coding MGP_NODShiLtJ_T0023919.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492607 214511739 + MGP_NODShiLtJ_P0023919 Gpatch2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023920.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492685 214516587 + MGP_NODShiLtJ_P0023920 Gpatch2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023921.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214492804 214641230 + MGP_NODShiLtJ_P0023921 Gpatch2 protein_coding protein_coding MGP_NODShiLtJ_T0023922.1 MGP_NODShiLtJ_G0016792.1 mouse_genomes_project 1 214504020 214641934 + MGP_NODShiLtJ_P0023922 Gpatch2 protein_coding protein_coding MGP_NODShiLtJ_T0011807.1 MGP_NODShiLtJ_G0009915.1 mouse_genomes_project 1 23224927 23228733 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101252.1 MGP_NODShiLtJ_G0039538.1 mouse_genomes_project 1 21222828 21234866 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101253.1 MGP_NODShiLtJ_G0039538.1 mouse_genomes_project 1 21223220 21234699 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0019737.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64918580 64933564 - MGP_NODShiLtJ_P0019737 Kctd18 protein_coding protein_coding MGP_NODShiLtJ_T0019738.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64918727 64933608 - MGP_NODShiLtJ_P0019738 Kctd18 protein_coding protein_coding MGP_NODShiLtJ_T0019739.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64918732 64933004 - MGP_NODShiLtJ_P0019739 Kctd18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019740.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64919551 64986636 - MGP_NODShiLtJ_P0019740 Kctd18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019741.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64920059 64933528 - MGP_NODShiLtJ_P0019741 Kctd18 protein_coding protein_coding MGP_NODShiLtJ_T0019742.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64920171 64926927 - Kctd18 protein_coding retained_intron MGP_NODShiLtJ_T0019743.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64920199 64925582 - Kctd18 protein_coding retained_intron MGP_NODShiLtJ_T0019744.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64923533 64933532 - Kctd18 protein_coding retained_intron MGP_NODShiLtJ_T0019745.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64924637 64926461 - Kctd18 protein_coding retained_intron MGP_NODShiLtJ_T0019746.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64927045 64933559 - Kctd18 protein_coding retained_intron MGP_NODShiLtJ_T0019747.1 MGP_NODShiLtJ_G0015908.1 mouse_genomes_project 1 64927081 64933559 - Kctd18 protein_coding retained_intron MGP_NODShiLtJ_T0005954.1 MGP_NODShiLtJ_G0004983.1 mouse_genomes_project 1 209687835 209688334 + Gm37218 lincRNA lincRNA MGP_NODShiLtJ_T0021719.1 MGP_NODShiLtJ_G0016307.1 mouse_genomes_project 1 149514981 149562246 - MGP_NODShiLtJ_P0021719 Zp3r protein_coding protein_coding MGP_NODShiLtJ_T0021720.1 MGP_NODShiLtJ_G0016307.1 mouse_genomes_project 1 149514981 149562246 - MGP_NODShiLtJ_P0021720 Zp3r protein_coding protein_coding MGP_NODShiLtJ_T0021721.1 MGP_NODShiLtJ_G0016307.1 mouse_genomes_project 1 149514984 149562237 - MGP_NODShiLtJ_P0021721 Zp3r protein_coding protein_coding MGP_NODShiLtJ_T0011141.1 MGP_NODShiLtJ_G0009274.1 mouse_genomes_project 1 100996130 100996441 + Gm26037 misc_RNA misc_RNA MGP_NODShiLtJ_T0012136.1 MGP_NODShiLtJ_G0010244.1 mouse_genomes_project 1 158968196 158968971 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019349.1 MGP_NODShiLtJ_G0015831.1 mouse_genomes_project 1 43828908 43923351 + MGP_NODShiLtJ_P0019349 Il1r1 protein_coding protein_coding MGP_NODShiLtJ_T0019350.1 MGP_NODShiLtJ_G0015831.1 mouse_genomes_project 1 43871075 43881659 + Il1r1 protein_coding processed_transcript MGP_NODShiLtJ_T0019351.1 MGP_NODShiLtJ_G0015831.1 mouse_genomes_project 1 43880544 43922265 + MGP_NODShiLtJ_P0019351 Il1r1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000359.1 MGP_NODShiLtJ_G0000297.1 mouse_genomes_project 1 6511442 6514936 - TEC TEC MGP_NODShiLtJ_T0005640.1 MGP_NODShiLtJ_G0004741.1 mouse_genomes_project 1 46152403 46152802 + lincRNA lincRNA MGP_NODShiLtJ_T0011921.1 MGP_NODShiLtJ_G0010029.1 mouse_genomes_project 1 62070803 62071199 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000526.1 MGP_NODShiLtJ_G0000462.1 mouse_genomes_project 1 93138424 93139470 - TEC TEC MGP_NODShiLtJ_T0012187.1 MGP_NODShiLtJ_G0010295.1 mouse_genomes_project 1 186356801 186358391 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099806.1 MGP_NODShiLtJ_G0038200.1 mouse_genomes_project 1 177862936 177863041 - Gm25336 snoRNA snoRNA MGP_NODShiLtJ_T0016928.1 MGP_NODShiLtJ_G0014988.1 mouse_genomes_project 1 177072639 177083294 - processed_transcript processed_transcript MGP_NODShiLtJ_T0016929.1 MGP_NODShiLtJ_G0014988.1 mouse_genomes_project 1 177072639 177075813 - processed_transcript retained_intron MGP_NODShiLtJ_T0005880.1 MGP_NODShiLtJ_G0004926.1 mouse_genomes_project 1 177701293 177703358 + Gm29290 lincRNA lincRNA MGP_NODShiLtJ_T0021196.1 MGP_NODShiLtJ_G0016195.1 mouse_genomes_project 1 104333048 104363586 + MGP_NODShiLtJ_P0021196 Gpc1 protein_coding protein_coding MGP_NODShiLtJ_T0021197.1 MGP_NODShiLtJ_G0016195.1 mouse_genomes_project 1 104333372 104337081 + Gpc1 protein_coding processed_transcript MGP_NODShiLtJ_T0021198.1 MGP_NODShiLtJ_G0016195.1 mouse_genomes_project 1 104354535 104357306 + Gpc1 protein_coding retained_intron MGP_NODShiLtJ_T0021199.1 MGP_NODShiLtJ_G0016195.1 mouse_genomes_project 1 104357899 104360329 + Gpc1 protein_coding retained_intron MGP_NODShiLtJ_T0021200.1 MGP_NODShiLtJ_G0016195.1 mouse_genomes_project 1 104358105 104360402 + Gpc1 protein_coding retained_intron MGP_NODShiLtJ_T0099807.1 MGP_NODShiLtJ_G0038201.1 mouse_genomes_project 1 184324564 184324674 - Gm24719 snoRNA snoRNA MGP_NODShiLtJ_T0011879.1 MGP_NODShiLtJ_G0009987.1 mouse_genomes_project 1 49434948 49435886 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000613.1 MGP_NODShiLtJ_G0000549.1 mouse_genomes_project 1 150956986 150958897 + TEC TEC MGP_NODShiLtJ_T0020003.1 MGP_NODShiLtJ_G0015952.1 mouse_genomes_project 1 70751232 70814674 - MGP_NODShiLtJ_P0020003 Gpr1 protein_coding protein_coding MGP_NODShiLtJ_T0020014.1 MGP_NODShiLtJ_G0015952.1 mouse_genomes_project 1 70806210 70814354 - Gpr1 protein_coding processed_transcript MGP_NODShiLtJ_T0005942.1 MGP_NODShiLtJ_G0004975.1 mouse_genomes_project 1 207323258 207334929 - Gm37267 lincRNA lincRNA MGP_NODShiLtJ_T0002740.1 MGP_NODShiLtJ_G0002601.1 mouse_genomes_project 1 41864868 41875481 + Gm16152 antisense antisense MGP_NODShiLtJ_T0002741.1 MGP_NODShiLtJ_G0002601.1 mouse_genomes_project 1 41870335 41871751 + Gm16152 antisense antisense MGP_NODShiLtJ_T0021923.1 MGP_NODShiLtJ_G0016352.1 mouse_genomes_project 1 152323089 152332419 + MGP_NODShiLtJ_P0021923 Ppp1r15b protein_coding protein_coding MGP_NODShiLtJ_T0021924.1 MGP_NODShiLtJ_G0016352.1 mouse_genomes_project 1 152323290 152332419 + Ppp1r15b protein_coding processed_transcript MGP_NODShiLtJ_T0097868.1 MGP_NODShiLtJ_G0036280.1 mouse_genomes_project 1 157715246 157715366 - Gm23782 rRNA rRNA MGP_NODShiLtJ_T0012047.1 MGP_NODShiLtJ_G0010155.1 mouse_genomes_project 1 118908744 118909812 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011743.1 MGP_NODShiLtJ_G0009851.1 mouse_genomes_project 1 3157392 3157786 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018983.1 MGP_NODShiLtJ_G0015766.1 mouse_genomes_project 1 34942141 35599855 + MGP_NODShiLtJ_P0018983 Khdrbs2 protein_coding protein_coding MGP_NODShiLtJ_T0018984.1 MGP_NODShiLtJ_G0015766.1 mouse_genomes_project 1 34942156 35034475 + MGP_NODShiLtJ_P0018984 Khdrbs2 protein_coding protein_coding MGP_NODShiLtJ_T0018985.1 MGP_NODShiLtJ_G0015766.1 mouse_genomes_project 1 34942175 35157574 + MGP_NODShiLtJ_P0018985 Khdrbs2 protein_coding protein_coding MGP_NODShiLtJ_T0018986.1 MGP_NODShiLtJ_G0015766.1 mouse_genomes_project 1 34942314 35115820 + MGP_NODShiLtJ_P0018986 Khdrbs2 protein_coding protein_coding MGP_NODShiLtJ_T0012052.1 MGP_NODShiLtJ_G0010160.1 mouse_genomes_project 1 120303871 120304101 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099815.1 MGP_NODShiLtJ_G0038209.1 mouse_genomes_project 1 185590290 185590374 + Mir5117 snoRNA snoRNA MGP_NODShiLtJ_T0000673.1 MGP_NODShiLtJ_G0000607.1 mouse_genomes_project 1 179947969 179952728 - TEC TEC MGP_NODShiLtJ_T0022491.1 MGP_NODShiLtJ_G0016472.1 mouse_genomes_project 1 177462299 177475787 + MGP_NODShiLtJ_P0022491 Rnasel protein_coding protein_coding MGP_NODShiLtJ_T0022492.1 MGP_NODShiLtJ_G0016472.1 mouse_genomes_project 1 177465846 177477110 + MGP_NODShiLtJ_P0022492 Rnasel protein_coding protein_coding MGP_NODShiLtJ_T0022493.1 MGP_NODShiLtJ_G0016472.1 mouse_genomes_project 1 177465851 177475851 + MGP_NODShiLtJ_P0022493 Rnasel protein_coding protein_coding MGP_NODShiLtJ_T0022494.1 MGP_NODShiLtJ_G0016472.1 mouse_genomes_project 1 177465867 177475634 + Rnasel protein_coding retained_intron MGP_NODShiLtJ_T0022495.1 MGP_NODShiLtJ_G0016472.1 mouse_genomes_project 1 177470203 177475634 + Rnasel protein_coding processed_transcript MGP_NODShiLtJ_T0024107.1 MGP_NODShiLtJ_G0016828.1 mouse_genomes_project 1 220891806 220901615 + MGP_NODShiLtJ_P0024107 A130010J15Rik protein_coding protein_coding MGP_NODShiLtJ_T0024109.1 MGP_NODShiLtJ_G0016828.1 mouse_genomes_project 1 220897228 220900059 + MGP_NODShiLtJ_P0024109 A130010J15Rik protein_coding protein_coding MGP_NODShiLtJ_T0024110.1 MGP_NODShiLtJ_G0016828.1 mouse_genomes_project 1 220897252 220898592 + MGP_NODShiLtJ_P0024110 A130010J15Rik protein_coding protein_coding MGP_NODShiLtJ_T0024111.1 MGP_NODShiLtJ_G0016828.1 mouse_genomes_project 1 220897337 220901615 + MGP_NODShiLtJ_P0024111 A130010J15Rik protein_coding protein_coding MGP_NODShiLtJ_T0024112.1 MGP_NODShiLtJ_G0016828.1 mouse_genomes_project 1 220897340 220900061 + MGP_NODShiLtJ_P0024112 A130010J15Rik protein_coding protein_coding MGP_NODShiLtJ_T0024113.1 MGP_NODShiLtJ_G0016828.1 mouse_genomes_project 1 220897340 220898187 + MGP_NODShiLtJ_P0024113 A130010J15Rik protein_coding protein_coding MGP_NODShiLtJ_T0024114.1 MGP_NODShiLtJ_G0016828.1 mouse_genomes_project 1 220897346 220898313 + MGP_NODShiLtJ_P0024114 A130010J15Rik protein_coding protein_coding MGP_NODShiLtJ_T0024115.1 MGP_NODShiLtJ_G0016828.1 mouse_genomes_project 1 220897504 220898356 + MGP_NODShiLtJ_P0024115 A130010J15Rik protein_coding protein_coding MGP_NODShiLtJ_T0098537.1 MGP_NODShiLtJ_G0036931.1 mouse_genomes_project 1 81495308 81495499 + Gm23472 snRNA snRNA MGP_NODShiLtJ_T0021271.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104939984 105019215 - MGP_NODShiLtJ_P0021271 Hdlbp protein_coding protein_coding MGP_NODShiLtJ_T0021272.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104941806 104981844 - MGP_NODShiLtJ_P0021272 Hdlbp protein_coding protein_coding MGP_NODShiLtJ_T0021273.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104942046 104976096 - MGP_NODShiLtJ_P0021273 Hdlbp protein_coding protein_coding MGP_NODShiLtJ_T0021274.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104957036 104981806 - MGP_NODShiLtJ_P0021274 Hdlbp protein_coding protein_coding MGP_NODShiLtJ_T0021275.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104962624 104981810 - Hdlbp protein_coding retained_intron MGP_NODShiLtJ_T0021276.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104965491 104976265 - MGP_NODShiLtJ_P0021276 Hdlbp protein_coding protein_coding MGP_NODShiLtJ_T0021277.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104972423 104980733 - MGP_NODShiLtJ_P0021277 Hdlbp protein_coding protein_coding MGP_NODShiLtJ_T0021278.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104972459 105019229 - MGP_NODShiLtJ_P0021278 Hdlbp protein_coding protein_coding MGP_NODShiLtJ_T0021279.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104975601 104981807 - Hdlbp protein_coding retained_intron MGP_NODShiLtJ_T0021280.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 104975991 105018790 - MGP_NODShiLtJ_P0021280 Hdlbp protein_coding protein_coding MGP_NODShiLtJ_T0021281.1 MGP_NODShiLtJ_G0016211.1 mouse_genomes_project 1 105015585 105018793 - Hdlbp protein_coding retained_intron MGP_NODShiLtJ_T0097875.1 MGP_NODShiLtJ_G0036287.1 mouse_genomes_project 1 208790719 208790835 - Gm26004 rRNA rRNA MGP_NODShiLtJ_T0002743.1 MGP_NODShiLtJ_G0002603.1 mouse_genomes_project 1 43201043 43209127 + D930019O06Rik antisense antisense MGP_NODShiLtJ_T0000517.1 MGP_NODShiLtJ_G0000453.1 mouse_genomes_project 1 90158782 90159936 - TEC TEC MGP_NODShiLtJ_T0012105.1 MGP_NODShiLtJ_G0010213.1 mouse_genomes_project 1 141340455 141340689 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002927.1 MGP_NODShiLtJ_G0002744.1 mouse_genomes_project 1 212362456 212367109 - Gm34882 antisense antisense MGP_NODShiLtJ_T0011962.1 MGP_NODShiLtJ_G0010070.1 mouse_genomes_project 1 73266244 73266566 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012029.1 MGP_NODShiLtJ_G0010137.1 mouse_genomes_project 1 107248422 107249270 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011989.1 MGP_NODShiLtJ_G0010097.1 mouse_genomes_project 1 88538433 88540157 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005625.1 MGP_NODShiLtJ_G0004730.1 mouse_genomes_project 1 39403300 39409899 + Gm33280 lincRNA lincRNA MGP_NODShiLtJ_T0021863.1 MGP_NODShiLtJ_G0016341.1 mouse_genomes_project 1 151423790 151432519 + MGP_NODShiLtJ_P0021863 Klhdc8a protein_coding protein_coding MGP_NODShiLtJ_T0002932.1 MGP_NODShiLtJ_G0002749.1 mouse_genomes_project 1 214390490 214393205 + 1700007P06Rik antisense antisense MGP_NODShiLtJ_T0018847.1 MGP_NODShiLtJ_G0015729.1 mouse_genomes_project 1 16849396 16884158 + MGP_NODShiLtJ_P0018847 Pi15 protein_coding protein_coding MGP_NODShiLtJ_T0016852.1 MGP_NODShiLtJ_G0014959.1 mouse_genomes_project 1 7918464 7999674 - 2610203C22Rik processed_transcript antisense MGP_NODShiLtJ_T0016853.1 MGP_NODShiLtJ_G0014959.1 mouse_genomes_project 1 7922321 7999719 - 2610203C22Rik processed_transcript retained_intron MGP_NODShiLtJ_T0016854.1 MGP_NODShiLtJ_G0014959.1 mouse_genomes_project 1 7966458 7999726 - 2610203C22Rik processed_transcript antisense MGP_NODShiLtJ_T0016855.1 MGP_NODShiLtJ_G0014959.1 mouse_genomes_project 1 7967063 7999757 - 2610203C22Rik processed_transcript antisense MGP_NODShiLtJ_T0016856.1 MGP_NODShiLtJ_G0014959.1 mouse_genomes_project 1 7969466 7999746 - 2610203C22Rik processed_transcript antisense MGP_NODShiLtJ_T0021123.1 MGP_NODShiLtJ_G0016176.1 mouse_genomes_project 1 102797787 102805575 + MGP_NODShiLtJ_P0021123 Fam132b protein_coding protein_coding MGP_NODShiLtJ_T0021124.1 MGP_NODShiLtJ_G0016176.1 mouse_genomes_project 1 102802051 102805450 + MGP_NODShiLtJ_P0021124 Fam132b protein_coding protein_coding MGP_NODShiLtJ_T0019079.1 MGP_NODShiLtJ_G0015783.1 mouse_genomes_project 1 39336104 39376494 + MGP_NODShiLtJ_P0019079 Hs6st1 protein_coding protein_coding MGP_NODShiLtJ_T0019080.1 MGP_NODShiLtJ_G0015783.1 mouse_genomes_project 1 39371737 39375028 + Hs6st1 protein_coding retained_intron MGP_NODShiLtJ_T0023928.1 MGP_NODShiLtJ_G0016794.1 mouse_genomes_project 1 215630058 215724438 + Ush2a protein_coding retained_intron MGP_NODShiLtJ_T0023929.1 MGP_NODShiLtJ_G0016794.1 mouse_genomes_project 1 215630070 215826068 + Ush2a protein_coding retained_intron MGP_NODShiLtJ_T0023930.1 MGP_NODShiLtJ_G0016794.1 mouse_genomes_project 1 215631069 216370206 + MGP_NODShiLtJ_P0023930 Ush2a protein_coding protein_coding MGP_NODShiLtJ_T0023931.1 MGP_NODShiLtJ_G0016794.1 mouse_genomes_project 1 215916418 216061744 + Ush2a protein_coding retained_intron MGP_NODShiLtJ_T0023932.1 MGP_NODShiLtJ_G0016794.1 mouse_genomes_project 1 216357627 216370130 + MGP_NODShiLtJ_P0023932 Ush2a protein_coding protein_coding MGP_NODShiLtJ_T0019055.1 MGP_NODShiLtJ_G0015776.1 mouse_genomes_project 1 37601592 37608706 + MGP_NODShiLtJ_P0019055 protein_coding protein_coding MGP_NODShiLtJ_T0019056.1 MGP_NODShiLtJ_G0015776.1 mouse_genomes_project 1 37601603 37603315 + MGP_NODShiLtJ_P0019056 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002720.1 MGP_NODShiLtJ_G0002584.1 mouse_genomes_project 1 18762889 18811371 - Gm15825 antisense antisense MGP_NODShiLtJ_T0023959.1 MGP_NODShiLtJ_G0016798.1 mouse_genomes_project 1 217213393 217333970 + Ptpn14 protein_coding retained_intron MGP_NODShiLtJ_T0023960.1 MGP_NODShiLtJ_G0016798.1 mouse_genomes_project 1 217274894 217366796 + MGP_NODShiLtJ_P0023960 Ptpn14 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023961.1 MGP_NODShiLtJ_G0016798.1 mouse_genomes_project 1 217275106 217345337 + Ptpn14 protein_coding retained_intron MGP_NODShiLtJ_T0023962.1 MGP_NODShiLtJ_G0016798.1 mouse_genomes_project 1 217275142 217363434 + MGP_NODShiLtJ_P0023962 Ptpn14 protein_coding protein_coding MGP_NODShiLtJ_T0023963.1 MGP_NODShiLtJ_G0016798.1 mouse_genomes_project 1 217338403 217345824 + Ptpn14 protein_coding retained_intron MGP_NODShiLtJ_T0023964.1 MGP_NODShiLtJ_G0016798.1 mouse_genomes_project 1 217356008 217356783 + Ptpn14 protein_coding processed_transcript MGP_NODShiLtJ_T0000386.1 MGP_NODShiLtJ_G0000324.1 mouse_genomes_project 1 15714004 15716984 + TEC TEC MGP_NODShiLtJ_T0005990.1 MGP_NODShiLtJ_G0005011.1 mouse_genomes_project 1 218855546 218856928 + D730003I15Rik lincRNA lincRNA MGP_NODShiLtJ_T0005991.1 MGP_NODShiLtJ_G0005011.1 mouse_genomes_project 1 218855566 218857233 + D730003I15Rik lincRNA lincRNA MGP_NODShiLtJ_T0019493.1 MGP_NODShiLtJ_G0015862.1 mouse_genomes_project 1 50327751 50347387 - MGP_NODShiLtJ_P0019493 Slc40a1 protein_coding protein_coding MGP_NODShiLtJ_T0019494.1 MGP_NODShiLtJ_G0015862.1 mouse_genomes_project 1 50334915 50347414 - Slc40a1 protein_coding retained_intron MGP_NODShiLtJ_T0019495.1 MGP_NODShiLtJ_G0015862.1 mouse_genomes_project 1 50338689 50345103 - Slc40a1 protein_coding processed_transcript MGP_NODShiLtJ_T0019496.1 MGP_NODShiLtJ_G0015862.1 mouse_genomes_project 1 50338697 50347055 - Slc40a1 protein_coding processed_transcript MGP_NODShiLtJ_T0019497.1 MGP_NODShiLtJ_G0015862.1 mouse_genomes_project 1 50340986 50348322 - MGP_NODShiLtJ_P0019497 Slc40a1 protein_coding protein_coding MGP_NODShiLtJ_T0019498.1 MGP_NODShiLtJ_G0015862.1 mouse_genomes_project 1 50340986 50348322 - MGP_NODShiLtJ_P0019498 Slc40a1 protein_coding protein_coding MGP_NODShiLtJ_T0019499.1 MGP_NODShiLtJ_G0015862.1 mouse_genomes_project 1 50340986 50348322 - MGP_NODShiLtJ_P0019499 Slc40a1 protein_coding protein_coding MGP_NODShiLtJ_T0019500.1 MGP_NODShiLtJ_G0015862.1 mouse_genomes_project 1 50345524 50348326 - Slc40a1 protein_coding retained_intron MGP_NODShiLtJ_T0098169.1 MGP_NODShiLtJ_G0036581.1 mouse_genomes_project 1 98682700 98682965 + Scarna6 scaRNA scaRNA MGP_NODShiLtJ_T0012023.1 MGP_NODShiLtJ_G0010131.1 mouse_genomes_project 1 102921832 102924128 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021638.1 MGP_NODShiLtJ_G0016291.1 mouse_genomes_project 1 145756711 145952608 + Mgat5 protein_coding retained_intron MGP_NODShiLtJ_T0021639.1 MGP_NODShiLtJ_G0016291.1 mouse_genomes_project 1 145756714 146059501 + MGP_NODShiLtJ_P0021639 Mgat5 protein_coding protein_coding MGP_NODShiLtJ_T0021640.1 MGP_NODShiLtJ_G0016291.1 mouse_genomes_project 1 145756724 145963187 + Mgat5 protein_coding retained_intron MGP_NODShiLtJ_T0021641.1 MGP_NODShiLtJ_G0016291.1 mouse_genomes_project 1 145869377 146054883 + MGP_NODShiLtJ_P0021641 Mgat5 protein_coding protein_coding MGP_NODShiLtJ_T0098505.1 MGP_NODShiLtJ_G0036899.1 mouse_genomes_project 1 7784888 7784991 + Gm24765 snRNA snRNA MGP_NODShiLtJ_T0009399.1 MGP_NODShiLtJ_G0007532.1 mouse_genomes_project 1 60431216 60431288 + Mir7681 miRNA miRNA MGP_NODShiLtJ_T0098512.1 MGP_NODShiLtJ_G0036906.1 mouse_genomes_project 1 25850524 25850631 - Gm22260 snRNA snRNA MGP_NODShiLtJ_T0005707.1 MGP_NODShiLtJ_G0004787.1 mouse_genomes_project 1 76364101 76365622 + Gm15671 lincRNA lincRNA MGP_NODShiLtJ_T0002732.1 MGP_NODShiLtJ_G0002595.1 mouse_genomes_project 1 40745753 40750206 - 4930439A04Rik antisense antisense MGP_NODShiLtJ_T0002733.1 MGP_NODShiLtJ_G0002595.1 mouse_genomes_project 1 40749588 40750222 - 4930439A04Rik antisense antisense MGP_NODShiLtJ_T0021559.1 MGP_NODShiLtJ_G0016275.1 mouse_genomes_project 1 137747608 137755341 - MGP_NODShiLtJ_P0021559 Dbi protein_coding protein_coding MGP_NODShiLtJ_T0021560.1 MGP_NODShiLtJ_G0016275.1 mouse_genomes_project 1 137747612 137755299 - MGP_NODShiLtJ_P0021560 Dbi protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021561.1 MGP_NODShiLtJ_G0016275.1 mouse_genomes_project 1 137747691 137754452 - Dbi protein_coding processed_transcript MGP_NODShiLtJ_T0021562.1 MGP_NODShiLtJ_G0016275.1 mouse_genomes_project 1 137747722 137755219 - MGP_NODShiLtJ_P0021562 Dbi protein_coding protein_coding MGP_NODShiLtJ_T0021563.1 MGP_NODShiLtJ_G0016275.1 mouse_genomes_project 1 137750332 137755329 - Dbi protein_coding retained_intron MGP_NODShiLtJ_T0021564.1 MGP_NODShiLtJ_G0016275.1 mouse_genomes_project 1 137754039 137755296 - Dbi protein_coding retained_intron MGP_NODShiLtJ_T0002813.1 MGP_NODShiLtJ_G0002658.1 mouse_genomes_project 1 105291548 105312084 + Gm10550 antisense antisense MGP_NODShiLtJ_T0002803.1 MGP_NODShiLtJ_G0002648.1 mouse_genomes_project 1 99578208 99583651 - 4930453O03Rik antisense antisense MGP_NODShiLtJ_T0021445.1 MGP_NODShiLtJ_G0016250.1 mouse_genomes_project 1 121954895 121977369 - MGP_NODShiLtJ_P0021445 Serpinb3b protein_coding protein_coding MGP_NODShiLtJ_T0021446.1 MGP_NODShiLtJ_G0016250.1 mouse_genomes_project 1 121954916 121977369 - MGP_NODShiLtJ_P0021446 Serpinb3b protein_coding protein_coding MGP_NODShiLtJ_T0016884.1 MGP_NODShiLtJ_G0014972.1 mouse_genomes_project 1 84336812 84365091 + Gm16582 processed_transcript processed_transcript MGP_NODShiLtJ_T0012017.1 MGP_NODShiLtJ_G0010125.1 mouse_genomes_project 1 100216166 100217395 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011800.1 MGP_NODShiLtJ_G0009908.1 mouse_genomes_project 1 20834229 20835430 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012069.1 MGP_NODShiLtJ_G0010177.1 mouse_genomes_project 1 128223061 128224478 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000572.1 MGP_NODShiLtJ_G0000508.1 mouse_genomes_project 1 126933722 126938944 - TEC TEC MGP_NODShiLtJ_T0000758.1 MGP_NODShiLtJ_G0000690.1 mouse_genomes_project 1 209920350 209923862 + TEC TEC MGP_NODShiLtJ_T0019139.1 MGP_NODShiLtJ_G0015793.1 mouse_genomes_project 1 39843777 39854722 - MGP_NODShiLtJ_P0019139 Ankrd39 protein_coding protein_coding MGP_NODShiLtJ_T0020894.1 MGP_NODShiLtJ_G0016127.1 mouse_genomes_project 1 97981570 97990437 - MGP_NODShiLtJ_P0020894 Ecel1 protein_coding protein_coding MGP_NODShiLtJ_T0020895.1 MGP_NODShiLtJ_G0016127.1 mouse_genomes_project 1 97981573 97988943 - MGP_NODShiLtJ_P0020895 Ecel1 protein_coding protein_coding MGP_NODShiLtJ_T0020896.1 MGP_NODShiLtJ_G0016127.1 mouse_genomes_project 1 97981577 97990081 - MGP_NODShiLtJ_P0020896 Ecel1 protein_coding protein_coding MGP_NODShiLtJ_T0020897.1 MGP_NODShiLtJ_G0016127.1 mouse_genomes_project 1 97981797 97982832 - Ecel1 protein_coding retained_intron MGP_NODShiLtJ_T0020898.1 MGP_NODShiLtJ_G0016127.1 mouse_genomes_project 1 97988938 97989227 - Ecel1 protein_coding processed_transcript MGP_NODShiLtJ_T0012190.1 MGP_NODShiLtJ_G0010298.1 mouse_genomes_project 1 187318908 187319619 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020637.1 MGP_NODShiLtJ_G0016067.1 mouse_genomes_project 1 88388802 88442432 + MGP_NODShiLtJ_P0020637 Acsl3 protein_coding protein_coding MGP_NODShiLtJ_T0020638.1 MGP_NODShiLtJ_G0016067.1 mouse_genomes_project 1 88388860 88441656 + MGP_NODShiLtJ_P0020638 Acsl3 protein_coding protein_coding MGP_NODShiLtJ_T0020641.1 MGP_NODShiLtJ_G0016067.1 mouse_genomes_project 1 88402525 88420825 + MGP_NODShiLtJ_P0020641 Acsl3 protein_coding protein_coding MGP_NODShiLtJ_T0020642.1 MGP_NODShiLtJ_G0016067.1 mouse_genomes_project 1 88411218 88442436 + MGP_NODShiLtJ_P0020642 Acsl3 protein_coding protein_coding MGP_NODShiLtJ_T0020643.1 MGP_NODShiLtJ_G0016067.1 mouse_genomes_project 1 88413526 88425837 + Acsl3 protein_coding retained_intron MGP_NODShiLtJ_T0020644.1 MGP_NODShiLtJ_G0016067.1 mouse_genomes_project 1 88422805 88430216 + Acsl3 protein_coding retained_intron MGP_NODShiLtJ_T0020645.1 MGP_NODShiLtJ_G0016067.1 mouse_genomes_project 1 88429842 88435978 + Acsl3 protein_coding retained_intron MGP_NODShiLtJ_T0020648.1 MGP_NODShiLtJ_G0016070.1 mouse_genomes_project 1 89277644 89283096 - MGP_NODShiLtJ_P0020648 Scg2 protein_coding protein_coding MGP_NODShiLtJ_T0020649.1 MGP_NODShiLtJ_G0016070.1 mouse_genomes_project 1 89277644 89283018 - MGP_NODShiLtJ_P0020649 Scg2 protein_coding protein_coding MGP_NODShiLtJ_T0002807.1 MGP_NODShiLtJ_G0002652.1 mouse_genomes_project 1 104322599 104339300 - Gm29481 antisense antisense MGP_NODShiLtJ_T0011815.1 MGP_NODShiLtJ_G0009923.1 mouse_genomes_project 1 26681397 26681953 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011969.1 MGP_NODShiLtJ_G0010077.1 mouse_genomes_project 1 75052008 75053648 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022191.1 MGP_NODShiLtJ_G0016411.1 mouse_genomes_project 1 155763004 155764081 - MGP_NODShiLtJ_P0022191 Gpr25 protein_coding protein_coding MGP_NODShiLtJ_T0011828.1 MGP_NODShiLtJ_G0009936.1 mouse_genomes_project 1 33766329 33766888 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101492.1 MGP_NODShiLtJ_G0039662.1 mouse_genomes_project 1 117162276 117264744 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0020735.1 MGP_NODShiLtJ_G0016089.1 mouse_genomes_project 1 93486559 93489407 + MGP_NODShiLtJ_P0020735 Ccl20 protein_coding protein_coding MGP_NODShiLtJ_T0020736.1 MGP_NODShiLtJ_G0016089.1 mouse_genomes_project 1 93486567 93489408 + MGP_NODShiLtJ_P0020736 Ccl20 protein_coding protein_coding MGP_NODShiLtJ_T0020737.1 MGP_NODShiLtJ_G0016089.1 mouse_genomes_project 1 93486586 93489408 + MGP_NODShiLtJ_P0020737 Ccl20 protein_coding protein_coding MGP_NODShiLtJ_T0023585.1 MGP_NODShiLtJ_G0016723.1 mouse_genomes_project 1 204877051 204892903 - MGP_NODShiLtJ_P0023585 Hnrnpu protein_coding protein_coding MGP_NODShiLtJ_T0023586.1 MGP_NODShiLtJ_G0016723.1 mouse_genomes_project 1 204877540 204885426 - Hnrnpu protein_coding retained_intron MGP_NODShiLtJ_T0023587.1 MGP_NODShiLtJ_G0016723.1 mouse_genomes_project 1 204886971 204888032 - Hnrnpu protein_coding retained_intron MGP_NODShiLtJ_T0023588.1 MGP_NODShiLtJ_G0016723.1 mouse_genomes_project 1 204887208 204889652 - Hnrnpu protein_coding processed_transcript MGP_NODShiLtJ_T0023589.1 MGP_NODShiLtJ_G0016723.1 mouse_genomes_project 1 204890747 204891511 - Hnrnpu protein_coding retained_intron MGP_NODShiLtJ_T0020030.1 MGP_NODShiLtJ_G0015956.1 mouse_genomes_project 1 71322465 71394188 - MGP_NODShiLtJ_P0020030 Dytn protein_coding protein_coding MGP_NODShiLtJ_T0020031.1 MGP_NODShiLtJ_G0015956.1 mouse_genomes_project 1 71368717 71394171 - Dytn protein_coding retained_intron MGP_NODShiLtJ_T0016932.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185587356 185590466 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016933.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185587541 185591474 + Gas5 processed_transcript lincRNA MGP_NODShiLtJ_T0016934.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185587863 185591470 + Gas5 processed_transcript lincRNA MGP_NODShiLtJ_T0016935.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588001 185591472 + Gas5 processed_transcript lincRNA MGP_NODShiLtJ_T0016936.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588097 185590481 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016937.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588097 185591468 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016938.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588097 185591472 + Gas5 processed_transcript lincRNA MGP_NODShiLtJ_T0016939.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588100 185591469 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016940.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588100 185591474 + Gas5 processed_transcript lincRNA MGP_NODShiLtJ_T0016941.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588100 185589991 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016942.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588100 185591474 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016943.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588101 185591181 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016944.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588102 185590495 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016945.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588106 185589564 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016946.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588112 185591474 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016947.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588118 185591474 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016948.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588120 185591413 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016949.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588122 185591474 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016950.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185588954 185589823 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016951.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185589629 185591474 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016952.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185590222 185591467 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016953.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185590243 185591060 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016954.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185590287 185591470 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016955.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185590652 185591472 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0016956.1 MGP_NODShiLtJ_G0014990.1 mouse_genomes_project 1 185590715 185591474 + Gas5 processed_transcript retained_intron MGP_NODShiLtJ_T0000616.1 MGP_NODShiLtJ_G0000552.1 mouse_genomes_project 1 152121602 152123411 - TEC TEC MGP_NODShiLtJ_T0023135.1 MGP_NODShiLtJ_G0016603.1 mouse_genomes_project 1 196268265 196281949 - MGP_NODShiLtJ_P0023135 Dusp12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023136.1 MGP_NODShiLtJ_G0016603.1 mouse_genomes_project 1 196268951 196281691 - MGP_NODShiLtJ_P0023136 Dusp12 protein_coding protein_coding MGP_NODShiLtJ_T0023137.1 MGP_NODShiLtJ_G0016603.1 mouse_genomes_project 1 196268951 196282032 - MGP_NODShiLtJ_P0023137 Dusp12 protein_coding protein_coding MGP_NODShiLtJ_T0023138.1 MGP_NODShiLtJ_G0016603.1 mouse_genomes_project 1 196268951 196281887 - MGP_NODShiLtJ_P0023138 Dusp12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023139.1 MGP_NODShiLtJ_G0016603.1 mouse_genomes_project 1 196268952 196281899 - MGP_NODShiLtJ_P0023139 Dusp12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023140.1 MGP_NODShiLtJ_G0016603.1 mouse_genomes_project 1 196269283 196281888 - MGP_NODShiLtJ_P0023140 Dusp12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023141.1 MGP_NODShiLtJ_G0016603.1 mouse_genomes_project 1 196275422 196281496 - MGP_NODShiLtJ_P0023141 Dusp12 protein_coding protein_coding MGP_NODShiLtJ_T0000569.1 MGP_NODShiLtJ_G0000505.1 mouse_genomes_project 1 120637385 120640696 - TEC TEC MGP_NODShiLtJ_T0019881.1 MGP_NODShiLtJ_G0015933.1 mouse_genomes_project 1 66745859 66852782 - Sumo1 protein_coding processed_transcript MGP_NODShiLtJ_T0019884.1 MGP_NODShiLtJ_G0015933.1 mouse_genomes_project 1 66806261 66852729 - MGP_NODShiLtJ_P0019884 Sumo1 protein_coding protein_coding MGP_NODShiLtJ_T0019885.1 MGP_NODShiLtJ_G0015933.1 mouse_genomes_project 1 66806309 66852681 - MGP_NODShiLtJ_P0019885 Sumo1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019886.1 MGP_NODShiLtJ_G0015933.1 mouse_genomes_project 1 66810300 66852824 - Sumo1 protein_coding retained_intron MGP_NODShiLtJ_T0000541.1 MGP_NODShiLtJ_G0000477.1 mouse_genomes_project 1 97663029 97664594 + TEC TEC MGP_NODShiLtJ_T0009408.1 MGP_NODShiLtJ_G0007541.1 mouse_genomes_project 1 76309126 76309217 + Gm23189 miRNA miRNA MGP_NODShiLtJ_T0020985.1 MGP_NODShiLtJ_G0016141.1 mouse_genomes_project 1 98769789 98868904 + MGP_NODShiLtJ_P0020985 Dgkd protein_coding protein_coding MGP_NODShiLtJ_T0020986.1 MGP_NODShiLtJ_G0016141.1 mouse_genomes_project 1 98800928 98839269 + Dgkd protein_coding retained_intron MGP_NODShiLtJ_T0020987.1 MGP_NODShiLtJ_G0016141.1 mouse_genomes_project 1 98841428 98845502 + Dgkd protein_coding retained_intron MGP_NODShiLtJ_T0020988.1 MGP_NODShiLtJ_G0016141.1 mouse_genomes_project 1 98855476 98862667 + MGP_NODShiLtJ_P0020988 Dgkd protein_coding protein_coding MGP_NODShiLtJ_T0020989.1 MGP_NODShiLtJ_G0016141.1 mouse_genomes_project 1 98858810 98869594 + MGP_NODShiLtJ_P0020989 Dgkd protein_coding protein_coding MGP_NODShiLtJ_T0020990.1 MGP_NODShiLtJ_G0016141.1 mouse_genomes_project 1 98859696 98864679 + Dgkd protein_coding retained_intron MGP_NODShiLtJ_T0020991.1 MGP_NODShiLtJ_G0016141.1 mouse_genomes_project 1 98862798 98869592 + MGP_NODShiLtJ_P0020991 Dgkd protein_coding protein_coding MGP_NODShiLtJ_T0024064.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219731342 219776307 - MGP_NODShiLtJ_P0024064 Rcor3 protein_coding protein_coding MGP_NODShiLtJ_T0024065.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219731552 219776298 - MGP_NODShiLtJ_P0024065 Rcor3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024066.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219734323 219751067 - MGP_NODShiLtJ_P0024066 Rcor3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024067.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219734526 219776329 - MGP_NODShiLtJ_P0024067 Rcor3 protein_coding protein_coding MGP_NODShiLtJ_T0024068.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219734550 219775278 - MGP_NODShiLtJ_P0024068 Rcor3 protein_coding protein_coding MGP_NODShiLtJ_T0024069.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219734646 219760608 - MGP_NODShiLtJ_P0024069 Rcor3 protein_coding protein_coding MGP_NODShiLtJ_T0024070.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219735127 219776194 - MGP_NODShiLtJ_P0024070 Rcor3 protein_coding protein_coding MGP_NODShiLtJ_T0024071.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219739925 219742591 - Rcor3 protein_coding retained_intron MGP_NODShiLtJ_T0024072.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219765233 219768645 - Rcor3 protein_coding retained_intron MGP_NODShiLtJ_T0024073.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219765377 219775043 - MGP_NODShiLtJ_P0024073 Rcor3 protein_coding protein_coding MGP_NODShiLtJ_T0024074.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219771585 219776302 - Rcor3 protein_coding retained_intron MGP_NODShiLtJ_T0024075.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219773784 219776277 - Rcor3 protein_coding processed_transcript MGP_NODShiLtJ_T0024076.1 MGP_NODShiLtJ_G0016821.1 mouse_genomes_project 1 219774075 219776291 - Rcor3 protein_coding processed_transcript MGP_NODShiLtJ_T0022084.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154696734 154720590 - MGP_NODShiLtJ_P0022084 Rnpep protein_coding protein_coding MGP_NODShiLtJ_T0022085.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154696734 154720590 - MGP_NODShiLtJ_P0022085 Rnpep protein_coding protein_coding MGP_NODShiLtJ_T0022086.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154699227 154701445 - Rnpep protein_coding retained_intron MGP_NODShiLtJ_T0022087.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154701064 154707393 - Rnpep protein_coding processed_transcript MGP_NODShiLtJ_T0022088.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154707304 154710420 - Rnpep protein_coding processed_transcript MGP_NODShiLtJ_T0022089.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154707306 154708688 - Rnpep protein_coding retained_intron MGP_NODShiLtJ_T0022090.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154711525 154713928 - Rnpep protein_coding retained_intron MGP_NODShiLtJ_T0022091.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154713858 154715624 - Rnpep protein_coding retained_intron MGP_NODShiLtJ_T0022092.1 MGP_NODShiLtJ_G0016392.1 mouse_genomes_project 1 154714154 154716427 - Rnpep protein_coding retained_intron MGP_NODShiLtJ_T0002904.1 MGP_NODShiLtJ_G0002725.1 mouse_genomes_project 1 196976055 196980715 - B930036N10Rik antisense antisense MGP_NODShiLtJ_T0002905.1 MGP_NODShiLtJ_G0002725.1 mouse_genomes_project 1 196979412 196980715 - B930036N10Rik antisense antisense MGP_NODShiLtJ_T0019381.1 MGP_NODShiLtJ_G0015839.1 mouse_genomes_project 1 44460588 44526140 + MGP_NODShiLtJ_P0019381 Tmem182 protein_coding protein_coding MGP_NODShiLtJ_T0023782.1 MGP_NODShiLtJ_G0016760.1 mouse_genomes_project 1 209144693 209145869 - MGP_NODShiLtJ_P0023782 Vmn1r1 protein_coding protein_coding MGP_NODShiLtJ_T0005692.1 MGP_NODShiLtJ_G0004775.1 mouse_genomes_project 1 69045772 69050421 - 4930587A21Rik lincRNA lincRNA MGP_NODShiLtJ_T0012233.1 MGP_NODShiLtJ_G0010341.1 mouse_genomes_project 1 209111627 209112411 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023076.1 MGP_NODShiLtJ_G0016583.1 mouse_genomes_project 1 192469556 192493997 - MGP_NODShiLtJ_P0023076 Mgst3 protein_coding protein_coding MGP_NODShiLtJ_T0011814.1 MGP_NODShiLtJ_G0009922.1 mouse_genomes_project 1 26220972 26223409 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000629.1 MGP_NODShiLtJ_G0000564.1 mouse_genomes_project 1 156873019 156874935 + TEC TEC MGP_NODShiLtJ_T0019613.1 MGP_NODShiLtJ_G0015882.1 mouse_genomes_project 1 59596010 59600863 + Ormdl1 protein_coding retained_intron MGP_NODShiLtJ_T0019614.1 MGP_NODShiLtJ_G0015882.1 mouse_genomes_project 1 59596010 59610991 + MGP_NODShiLtJ_P0019614 Ormdl1 protein_coding protein_coding MGP_NODShiLtJ_T0000702.1 MGP_NODShiLtJ_G0000636.1 mouse_genomes_project 1 185534542 185535719 + TEC TEC MGP_NODShiLtJ_T0101478.1 MGP_NODShiLtJ_G0039648.1 mouse_genomes_project 1 97884719 97887690 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0020829.1 MGP_NODShiLtJ_G0016110.1 mouse_genomes_project 1 96710752 96723592 + MGP_NODShiLtJ_P0020829 2810459M11Rik protein_coding protein_coding MGP_NODShiLtJ_T0020830.1 MGP_NODShiLtJ_G0016110.1 mouse_genomes_project 1 96710752 96721489 + MGP_NODShiLtJ_P0020830 2810459M11Rik protein_coding protein_coding MGP_NODShiLtJ_T0002797.1 MGP_NODShiLtJ_G0002642.1 mouse_genomes_project 1 96592922 96597008 - Gm28884 antisense antisense MGP_NODShiLtJ_T0018894.1 MGP_NODShiLtJ_G0015746.1 mouse_genomes_project 1 21339908 21342332 + MGP_NODShiLtJ_P0018894 Khdc1b protein_coding protein_coding MGP_NODShiLtJ_T0002777.1 MGP_NODShiLtJ_G0002630.1 mouse_genomes_project 1 80857049 80861667 + Apol7d antisense antisense MGP_NODShiLtJ_T0002778.1 MGP_NODShiLtJ_G0002630.1 mouse_genomes_project 1 80857100 80867752 + Apol7d antisense antisense MGP_NODShiLtJ_T0002779.1 MGP_NODShiLtJ_G0002630.1 mouse_genomes_project 1 80857547 80868542 + Apol7d antisense antisense MGP_NODShiLtJ_T0002780.1 MGP_NODShiLtJ_G0002630.1 mouse_genomes_project 1 80857551 80861455 + Apol7d antisense antisense MGP_NODShiLtJ_T0099746.1 MGP_NODShiLtJ_G0038140.1 mouse_genomes_project 1 27414456 27414562 + Gm24064 snoRNA snoRNA MGP_NODShiLtJ_T0012010.1 MGP_NODShiLtJ_G0010118.1 mouse_genomes_project 1 97015805 97016640 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021315.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105312503 105339229 + MGP_NODShiLtJ_P0021315 Atg4b protein_coding protein_coding MGP_NODShiLtJ_T0021316.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105315904 105359519 + MGP_NODShiLtJ_P0021316 Atg4b protein_coding protein_coding MGP_NODShiLtJ_T0021317.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105315987 105341834 + MGP_NODShiLtJ_P0021317 Atg4b protein_coding protein_coding MGP_NODShiLtJ_T0021318.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105316034 105353824 + MGP_NODShiLtJ_P0021318 Atg4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021319.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105316044 105357079 + Atg4b protein_coding retained_intron MGP_NODShiLtJ_T0021320.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105316161 105330502 + Atg4b protein_coding processed_transcript MGP_NODShiLtJ_T0021321.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105330478 105338994 + Atg4b protein_coding retained_intron MGP_NODShiLtJ_T0021322.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105353243 105353982 + Atg4b protein_coding retained_intron MGP_NODShiLtJ_T0021323.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105353697 105356777 + MGP_NODShiLtJ_P0021323 Atg4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021324.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105354483 105355481 + Atg4b protein_coding retained_intron MGP_NODShiLtJ_T0021325.1 MGP_NODShiLtJ_G0016217.1 mouse_genomes_project 1 105355118 105356799 + Atg4b protein_coding retained_intron MGP_NODShiLtJ_T0020494.1 MGP_NODShiLtJ_G0016046.1 mouse_genomes_project 1 84651751 84655315 - MGP_NODShiLtJ_P0020494 A630095N17Rik protein_coding protein_coding MGP_NODShiLtJ_T0020495.1 MGP_NODShiLtJ_G0016046.1 mouse_genomes_project 1 84651912 84663564 - MGP_NODShiLtJ_P0020495 A630095N17Rik protein_coding protein_coding MGP_NODShiLtJ_T0020496.1 MGP_NODShiLtJ_G0016046.1 mouse_genomes_project 1 84662336 84663576 - MGP_NODShiLtJ_P0020496 A630095N17Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009477.1 MGP_NODShiLtJ_G0007610.1 mouse_genomes_project 1 222930036 222930117 + Mir29b-2 miRNA miRNA MGP_NODShiLtJ_T0023414.1 MGP_NODShiLtJ_G0016662.1 mouse_genomes_project 1 198162160 198172265 - MGP_NODShiLtJ_P0023414 Slamf8 protein_coding protein_coding MGP_NODShiLtJ_T0023415.1 MGP_NODShiLtJ_G0016662.1 mouse_genomes_project 1 198170675 198172146 - Slamf8 protein_coding retained_intron MGP_NODShiLtJ_T0011987.1 MGP_NODShiLtJ_G0010095.1 mouse_genomes_project 1 85605369 85605769 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101463.1 MGP_NODShiLtJ_G0039633.1 mouse_genomes_project 1 21077576 21086779 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0019128.1 MGP_NODShiLtJ_G0015790.1 mouse_genomes_project 1 39773766 39810816 + MGP_NODShiLtJ_P0019128 Cnnm4 protein_coding protein_coding MGP_NODShiLtJ_T0019129.1 MGP_NODShiLtJ_G0015790.1 mouse_genomes_project 1 39774103 39775475 + Cnnm4 protein_coding retained_intron MGP_NODShiLtJ_T0101506.1 MGP_NODShiLtJ_G0039676.1 mouse_genomes_project 1 198721305 198721605 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0021339.1 MGP_NODShiLtJ_G0016223.1 mouse_genomes_project 1 105589167 105625548 + MGP_NODShiLtJ_P0021339 protein_coding protein_coding MGP_NODShiLtJ_T0021341.1 MGP_NODShiLtJ_G0016223.1 mouse_genomes_project 1 105619761 105626024 + MGP_NODShiLtJ_P0021341 protein_coding protein_coding MGP_NODShiLtJ_T0005763.1 MGP_NODShiLtJ_G0004828.1 mouse_genomes_project 1 99920644 99922463 + Gm29336 lincRNA lincRNA MGP_NODShiLtJ_T0002913.1 MGP_NODShiLtJ_G0002733.1 mouse_genomes_project 1 203223566 203228276 - Gm15423 antisense antisense MGP_NODShiLtJ_T0101487.1 MGP_NODShiLtJ_G0039657.1 mouse_genomes_project 1 104058266 104058449 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098524.1 MGP_NODShiLtJ_G0036918.1 mouse_genomes_project 1 60468526 60468640 - Gm24251 snRNA snRNA MGP_NODShiLtJ_T0000578.1 MGP_NODShiLtJ_G0000514.1 mouse_genomes_project 1 139032009 139035067 + TEC TEC MGP_NODShiLtJ_T0002941.1 MGP_NODShiLtJ_G0002757.1 mouse_genomes_project 1 217694520 217749635 + Prox1os antisense antisense MGP_NODShiLtJ_T0012154.1 MGP_NODShiLtJ_G0010262.1 mouse_genomes_project 1 171919994 171920219 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016857.1 MGP_NODShiLtJ_G0014960.1 mouse_genomes_project 1 37242581 37254918 - Gm26788 processed_transcript antisense MGP_NODShiLtJ_T0016858.1 MGP_NODShiLtJ_G0014960.1 mouse_genomes_project 1 37251675 37255093 - Gm26788 processed_transcript retained_intron MGP_NODShiLtJ_T0098571.1 MGP_NODShiLtJ_G0036965.1 mouse_genomes_project 1 172969759 172969865 - Gm23535 snRNA snRNA MGP_NODShiLtJ_T0098542.1 MGP_NODShiLtJ_G0036936.1 mouse_genomes_project 1 98095061 98095162 + Gm26187 snRNA snRNA MGP_NODShiLtJ_T0020018.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71115557 71271868 + MGP_NODShiLtJ_P0020018 Adam23 protein_coding protein_coding MGP_NODShiLtJ_T0020019.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71115561 71296368 + MGP_NODShiLtJ_P0020019 Adam23 protein_coding protein_coding MGP_NODShiLtJ_T0020020.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71115576 71266159 + Adam23 protein_coding retained_intron MGP_NODShiLtJ_T0020021.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71115601 71225911 + Adam23 protein_coding retained_intron MGP_NODShiLtJ_T0020022.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71115878 71293008 + MGP_NODShiLtJ_P0020022 Adam23 protein_coding protein_coding MGP_NODShiLtJ_T0020023.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71115878 71296368 + MGP_NODShiLtJ_P0020023 Adam23 protein_coding protein_coding MGP_NODShiLtJ_T0020024.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71141921 71239722 + Adam23 protein_coding processed_transcript MGP_NODShiLtJ_T0020025.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71165797 71296368 + Adam23 protein_coding processed_transcript MGP_NODShiLtJ_T0020026.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71230038 71233562 + Adam23 protein_coding retained_intron MGP_NODShiLtJ_T0020027.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71251687 71263975 + Adam23 protein_coding retained_intron MGP_NODShiLtJ_T0020028.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71278886 71282274 + Adam23 protein_coding retained_intron MGP_NODShiLtJ_T0020029.1 MGP_NODShiLtJ_G0015955.1 mouse_genomes_project 1 71285113 71292902 + Adam23 protein_coding retained_intron MGP_NODShiLtJ_T0005852.1 MGP_NODShiLtJ_G0004904.1 mouse_genomes_project 1 156068702 156087255 + Gm37799 lincRNA lincRNA MGP_NODShiLtJ_T0023150.1 MGP_NODShiLtJ_G0016607.1 mouse_genomes_project 1 196353338 196371924 - MGP_NODShiLtJ_P0023150 Fcgr2b protein_coding protein_coding MGP_NODShiLtJ_T0023151.1 MGP_NODShiLtJ_G0016607.1 mouse_genomes_project 1 196356059 196371924 - MGP_NODShiLtJ_P0023151 Fcgr2b protein_coding protein_coding MGP_NODShiLtJ_T0023152.1 MGP_NODShiLtJ_G0016607.1 mouse_genomes_project 1 196356233 196357130 - Fcgr2b protein_coding processed_transcript MGP_NODShiLtJ_T0023153.1 MGP_NODShiLtJ_G0016607.1 mouse_genomes_project 1 196356268 196372360 - MGP_NODShiLtJ_P0023153 Fcgr2b protein_coding protein_coding MGP_NODShiLtJ_T0023154.1 MGP_NODShiLtJ_G0016607.1 mouse_genomes_project 1 196356492 196371924 - MGP_NODShiLtJ_P0023154 Fcgr2b protein_coding protein_coding MGP_NODShiLtJ_T0023155.1 MGP_NODShiLtJ_G0016607.1 mouse_genomes_project 1 196359794 196371924 - Fcgr2b protein_coding retained_intron MGP_NODShiLtJ_T0023156.1 MGP_NODShiLtJ_G0016607.1 mouse_genomes_project 1 196364714 196371924 - Fcgr2b protein_coding retained_intron MGP_NODShiLtJ_T0018752.1 MGP_NODShiLtJ_G0015708.1 mouse_genomes_project 1 11946584 11959926 - MGP_NODShiLtJ_P0018752 Prdm14 protein_coding protein_coding MGP_NODShiLtJ_T0022312.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165503050 165510020 - MGP_NODShiLtJ_P0022312 Rgs1 protein_coding protein_coding MGP_NODShiLtJ_T0022313.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165503997 165509834 - Rgs1 protein_coding retained_intron MGP_NODShiLtJ_T0022314.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165504756 165509838 - MGP_NODShiLtJ_P0022314 Rgs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022315.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165505372 165509838 - MGP_NODShiLtJ_P0022315 Rgs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022316.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165505450 165509806 - MGP_NODShiLtJ_P0022316 Rgs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022317.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165505450 165509836 - MGP_NODShiLtJ_P0022317 Rgs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022318.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165506240 165509837 - MGP_NODShiLtJ_P0022318 Rgs1 protein_coding protein_coding MGP_NODShiLtJ_T0022319.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165508570 165509836 - Rgs1 protein_coding retained_intron MGP_NODShiLtJ_T0022320.1 MGP_NODShiLtJ_G0016439.1 mouse_genomes_project 1 165508573 165509839 - Rgs1 protein_coding retained_intron MGP_NODShiLtJ_T0018592.1 MGP_NODShiLtJ_G0015685.1 mouse_genomes_project 1 3518813 3522505 - MGP_NODShiLtJ_P0018592 Npbwr1 protein_coding protein_coding MGP_NODShiLtJ_T0020856.1 MGP_NODShiLtJ_G0016115.1 mouse_genomes_project 1 96979897 96981773 + B3gnt7 protein_coding retained_intron MGP_NODShiLtJ_T0020857.1 MGP_NODShiLtJ_G0016115.1 mouse_genomes_project 1 96980299 96984371 + MGP_NODShiLtJ_P0020857 B3gnt7 protein_coding protein_coding MGP_NODShiLtJ_T0020858.1 MGP_NODShiLtJ_G0016115.1 mouse_genomes_project 1 96980596 96982915 + MGP_NODShiLtJ_P0020858 B3gnt7 protein_coding protein_coding MGP_NODShiLtJ_T0022675.1 MGP_NODShiLtJ_G0016504.1 mouse_genomes_project 1 182460737 182575050 - MGP_NODShiLtJ_P0022675 Brinp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022676.1 MGP_NODShiLtJ_G0016504.1 mouse_genomes_project 1 182460737 182575147 - MGP_NODShiLtJ_P0022676 Brinp2 protein_coding protein_coding MGP_NODShiLtJ_T0022677.1 MGP_NODShiLtJ_G0016504.1 mouse_genomes_project 1 182516812 182517573 - Brinp2 protein_coding processed_transcript MGP_NODShiLtJ_T0022678.1 MGP_NODShiLtJ_G0016504.1 mouse_genomes_project 1 182571117 182575116 - Brinp2 protein_coding retained_intron MGP_NODShiLtJ_T0021032.1 MGP_NODShiLtJ_G0016157.1 mouse_genomes_project 1 99938915 99969914 - MGP_NODShiLtJ_P0021032 Arl4c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021033.1 MGP_NODShiLtJ_G0016157.1 mouse_genomes_project 1 99938917 99969914 - MGP_NODShiLtJ_P0021033 Arl4c protein_coding protein_coding MGP_NODShiLtJ_T0021034.1 MGP_NODShiLtJ_G0016157.1 mouse_genomes_project 1 99966176 99970259 - MGP_NODShiLtJ_P0021034 Arl4c protein_coding protein_coding MGP_NODShiLtJ_T0018651.1 MGP_NODShiLtJ_G0015695.1 mouse_genomes_project 1 8099133 8135367 - MGP_NODShiLtJ_P0018651 Vcpip1 protein_coding protein_coding MGP_NODShiLtJ_T0012059.1 MGP_NODShiLtJ_G0010167.1 mouse_genomes_project 1 123323234 123324507 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011756.1 MGP_NODShiLtJ_G0009864.1 mouse_genomes_project 1 5510125 5510411 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099824.1 MGP_NODShiLtJ_G0038218.1 mouse_genomes_project 1 196782174 196782265 + Gm25151 snoRNA snoRNA MGP_NODShiLtJ_T0012188.1 MGP_NODShiLtJ_G0010296.1 mouse_genomes_project 1 186437597 186438801 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021438.1 MGP_NODShiLtJ_G0016247.1 mouse_genomes_project 1 121546911 121570512 + MGP_NODShiLtJ_P0021438 Serpinb12 protein_coding protein_coding MGP_NODShiLtJ_T0021439.1 MGP_NODShiLtJ_G0016247.1 mouse_genomes_project 1 121551348 121570512 + MGP_NODShiLtJ_P0021439 Serpinb12 protein_coding protein_coding MGP_NODShiLtJ_T0021440.1 MGP_NODShiLtJ_G0016247.1 mouse_genomes_project 1 121551350 121563890 + Serpinb12 protein_coding retained_intron MGP_NODShiLtJ_T0098574.1 MGP_NODShiLtJ_G0036968.1 mouse_genomes_project 1 175399555 175399688 - Gm25279 snRNA snRNA MGP_NODShiLtJ_T0000668.1 MGP_NODShiLtJ_G0000602.1 mouse_genomes_project 1 177426716 177428636 + TEC TEC MGP_NODShiLtJ_T0098569.1 MGP_NODShiLtJ_G0036963.1 mouse_genomes_project 1 165943116 165943223 - Gm23672 snRNA snRNA MGP_NODShiLtJ_T0005822.1 MGP_NODShiLtJ_G0004878.1 mouse_genomes_project 1 138510268 138532757 + Gm29345 lincRNA lincRNA MGP_NODShiLtJ_T0022712.1 MGP_NODShiLtJ_G0016509.1 mouse_genomes_project 1 184395363 184398810 + 4930523C07Rik protein_coding retained_intron MGP_NODShiLtJ_T0022713.1 MGP_NODShiLtJ_G0016509.1 mouse_genomes_project 1 184395365 184426396 + 4930523C07Rik protein_coding lincRNA MGP_NODShiLtJ_T0022714.1 MGP_NODShiLtJ_G0016509.1 mouse_genomes_project 1 184395365 184435064 + 4930523C07Rik protein_coding lincRNA MGP_NODShiLtJ_T0022715.1 MGP_NODShiLtJ_G0016509.1 mouse_genomes_project 1 184395386 184427638 + 4930523C07Rik protein_coding lincRNA MGP_NODShiLtJ_T0022716.1 MGP_NODShiLtJ_G0016509.1 mouse_genomes_project 1 184395428 184426365 + 4930523C07Rik protein_coding lincRNA MGP_NODShiLtJ_T0022717.1 MGP_NODShiLtJ_G0016509.1 mouse_genomes_project 1 184430017 184430317 + MGP_NODShiLtJ_P0022717 4930523C07Rik protein_coding protein_coding MGP_NODShiLtJ_T0020509.1 MGP_NODShiLtJ_G0016048.1 mouse_genomes_project 1 84678468 84695362 - MGP_NODShiLtJ_P0020509 Ptprn protein_coding protein_coding MGP_NODShiLtJ_T0020510.1 MGP_NODShiLtJ_G0016048.1 mouse_genomes_project 1 84678990 84695276 - MGP_NODShiLtJ_P0020510 Ptprn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020511.1 MGP_NODShiLtJ_G0016048.1 mouse_genomes_project 1 84688007 84689147 - Ptprn protein_coding retained_intron MGP_NODShiLtJ_T0020512.1 MGP_NODShiLtJ_G0016048.1 mouse_genomes_project 1 84689640 84695057 - MGP_NODShiLtJ_P0020512 Ptprn protein_coding protein_coding MGP_NODShiLtJ_T0020513.1 MGP_NODShiLtJ_G0016048.1 mouse_genomes_project 1 84689640 84695199 - MGP_NODShiLtJ_P0020513 Ptprn protein_coding protein_coding MGP_NODShiLtJ_T0020514.1 MGP_NODShiLtJ_G0016048.1 mouse_genomes_project 1 84689708 84695651 - MGP_NODShiLtJ_P0020514 Ptprn protein_coding protein_coding MGP_NODShiLtJ_T0020515.1 MGP_NODShiLtJ_G0016048.1 mouse_genomes_project 1 84689732 84695357 - Ptprn protein_coding processed_transcript MGP_NODShiLtJ_T0000606.1 MGP_NODShiLtJ_G0000542.1 mouse_genomes_project 1 148645495 148647710 + TEC TEC MGP_NODShiLtJ_T0020621.1 MGP_NODShiLtJ_G0016063.1 mouse_genomes_project 1 88015210 88131161 + MGP_NODShiLtJ_P0020621 Sgpp2 protein_coding protein_coding MGP_NODShiLtJ_T0002916.1 MGP_NODShiLtJ_G0002735.1 mouse_genomes_project 1 204865842 204871258 - B230369F24Rik antisense antisense MGP_NODShiLtJ_T0022441.1 MGP_NODShiLtJ_G0016463.1 mouse_genomes_project 1 176448210 176519869 - MGP_NODShiLtJ_P0022441 Smg7 protein_coding protein_coding MGP_NODShiLtJ_T0022442.1 MGP_NODShiLtJ_G0016463.1 mouse_genomes_project 1 176448211 176494913 - MGP_NODShiLtJ_P0022442 Smg7 protein_coding protein_coding MGP_NODShiLtJ_T0022443.1 MGP_NODShiLtJ_G0016463.1 mouse_genomes_project 1 176451035 176519893 - MGP_NODShiLtJ_P0022443 Smg7 protein_coding protein_coding MGP_NODShiLtJ_T0022444.1 MGP_NODShiLtJ_G0016463.1 mouse_genomes_project 1 176457427 176487903 - Smg7 protein_coding processed_transcript MGP_NODShiLtJ_T0022445.1 MGP_NODShiLtJ_G0016463.1 mouse_genomes_project 1 176457449 176462346 - Smg7 protein_coding processed_transcript MGP_NODShiLtJ_T0022446.1 MGP_NODShiLtJ_G0016463.1 mouse_genomes_project 1 176459266 176462261 - Smg7 protein_coding retained_intron MGP_NODShiLtJ_T0000518.1 MGP_NODShiLtJ_G0000454.1 mouse_genomes_project 1 90178244 90179953 - TEC TEC MGP_NODShiLtJ_T0012251.1 MGP_NODShiLtJ_G0010359.1 mouse_genomes_project 1 219465524 219465856 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005722.1 MGP_NODShiLtJ_G0004796.1 mouse_genomes_project 1 82616310 82659342 + Gm29185 lincRNA lincRNA MGP_NODShiLtJ_T0005741.1 MGP_NODShiLtJ_G0004810.1 mouse_genomes_project 1 88342938 88347595 + Gm29611 lincRNA lincRNA MGP_NODShiLtJ_T0020698.1 MGP_NODShiLtJ_G0016082.1 mouse_genomes_project 1 92746011 92900179 - MGP_NODShiLtJ_P0020698 Col4a4 protein_coding protein_coding MGP_NODShiLtJ_T0020699.1 MGP_NODShiLtJ_G0016082.1 mouse_genomes_project 1 92850158 92900122 - Col4a4 protein_coding retained_intron MGP_NODShiLtJ_T0016850.1 MGP_NODShiLtJ_G0014958.1 mouse_genomes_project 1 1864444 1867272 + Gm37587 processed_transcript retained_intron MGP_NODShiLtJ_T0016851.1 MGP_NODShiLtJ_G0014958.1 mouse_genomes_project 1 1865367 1867452 + Gm37587 processed_transcript antisense MGP_NODShiLtJ_T0021224.1 MGP_NODShiLtJ_G0016200.1 mouse_genomes_project 1 104456755 104493405 + MGP_NODShiLtJ_P0021224 Gpr35 protein_coding protein_coding MGP_NODShiLtJ_T0021225.1 MGP_NODShiLtJ_G0016200.1 mouse_genomes_project 1 104462916 104493728 + MGP_NODShiLtJ_P0021225 Gpr35 protein_coding protein_coding MGP_NODShiLtJ_T0021226.1 MGP_NODShiLtJ_G0016200.1 mouse_genomes_project 1 104483840 104496972 + MGP_NODShiLtJ_P0021226 Gpr35 protein_coding protein_coding MGP_NODShiLtJ_T0021227.1 MGP_NODShiLtJ_G0016200.1 mouse_genomes_project 1 104483840 104495763 + MGP_NODShiLtJ_P0021227 Gpr35 protein_coding protein_coding MGP_NODShiLtJ_T0021228.1 MGP_NODShiLtJ_G0016200.1 mouse_genomes_project 1 104486065 104496583 + MGP_NODShiLtJ_P0021228 Gpr35 protein_coding protein_coding MGP_NODShiLtJ_T0021229.1 MGP_NODShiLtJ_G0016200.1 mouse_genomes_project 1 104489640 104497110 + MGP_NODShiLtJ_P0021229 Gpr35 protein_coding protein_coding MGP_NODShiLtJ_T0022814.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186630227 186957012 - MGP_NODShiLtJ_P0022814 Dnm3 protein_coding protein_coding MGP_NODShiLtJ_T0022815.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186630232 186633481 - Dnm3 protein_coding retained_intron MGP_NODShiLtJ_T0022816.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186635056 187160812 - MGP_NODShiLtJ_P0022816 Dnm3 protein_coding protein_coding MGP_NODShiLtJ_T0022817.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186637966 187160812 - MGP_NODShiLtJ_P0022817 Dnm3 protein_coding protein_coding MGP_NODShiLtJ_T0022818.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186639269 186643769 - Dnm3 protein_coding retained_intron MGP_NODShiLtJ_T0022819.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186654253 186956956 - MGP_NODShiLtJ_P0022819 Dnm3 protein_coding protein_coding MGP_NODShiLtJ_T0022820.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186665415 186786596 - Dnm3 protein_coding retained_intron MGP_NODShiLtJ_T0022821.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186933562 186956971 - Dnm3 protein_coding processed_transcript MGP_NODShiLtJ_T0022822.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186943907 186977195 - Dnm3 protein_coding processed_transcript MGP_NODShiLtJ_T0022823.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 186983097 187160790 - Dnm3 protein_coding retained_intron MGP_NODShiLtJ_T0022824.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 187050927 187091485 - Dnm3 protein_coding processed_transcript MGP_NODShiLtJ_T0022825.1 MGP_NODShiLtJ_G0016528.1 mouse_genomes_project 1 187071675 187074154 - Dnm3 protein_coding retained_intron MGP_NODShiLtJ_T0097871.1 MGP_NODShiLtJ_G0036283.1 mouse_genomes_project 1 173131494 173131626 + n-R5s219 rRNA rRNA MGP_NODShiLtJ_T0016874.1 MGP_NODShiLtJ_G0014969.1 mouse_genomes_project 1 63861253 63867756 + 9130024F11Rik processed_transcript antisense MGP_NODShiLtJ_T0016875.1 MGP_NODShiLtJ_G0014969.1 mouse_genomes_project 1 63862379 63864507 + 9130024F11Rik processed_transcript antisense MGP_NODShiLtJ_T0016876.1 MGP_NODShiLtJ_G0014969.1 mouse_genomes_project 1 63862381 63943763 + 9130024F11Rik processed_transcript antisense MGP_NODShiLtJ_T0016877.1 MGP_NODShiLtJ_G0014969.1 mouse_genomes_project 1 63863234 63867752 + 9130024F11Rik processed_transcript TEC MGP_NODShiLtJ_T0016878.1 MGP_NODShiLtJ_G0014969.1 mouse_genomes_project 1 63941641 63951334 + 9130024F11Rik processed_transcript antisense MGP_NODShiLtJ_T0005803.1 MGP_NODShiLtJ_G0004864.1 mouse_genomes_project 1 122445695 122453701 + Gm15389 lincRNA lincRNA MGP_NODShiLtJ_T0000605.1 MGP_NODShiLtJ_G0000541.1 mouse_genomes_project 1 148616809 148620647 + TEC TEC MGP_NODShiLtJ_T0020059.1 MGP_NODShiLtJ_G0015964.1 mouse_genomes_project 1 72478457 72485653 - MGP_NODShiLtJ_P0020059 Fzd5 protein_coding protein_coding MGP_NODShiLtJ_T0020060.1 MGP_NODShiLtJ_G0015964.1 mouse_genomes_project 1 72482370 72485651 - MGP_NODShiLtJ_P0020060 Fzd5 protein_coding protein_coding MGP_NODShiLtJ_T0019929.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67436384 67614225 + MGP_NODShiLtJ_P0019929 Nbeal1 protein_coding protein_coding MGP_NODShiLtJ_T0019930.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67436597 67441678 + Nbeal1 protein_coding retained_intron MGP_NODShiLtJ_T0019931.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67481194 67495195 + MGP_NODShiLtJ_P0019931 Nbeal1 protein_coding protein_coding MGP_NODShiLtJ_T0019932.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67486206 67489680 + Nbeal1 protein_coding retained_intron MGP_NODShiLtJ_T0019933.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67495097 67560020 + Nbeal1 protein_coding retained_intron MGP_NODShiLtJ_T0019934.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67537494 67602508 + MGP_NODShiLtJ_P0019934 Nbeal1 protein_coding protein_coding MGP_NODShiLtJ_T0019935.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67537502 67606608 + MGP_NODShiLtJ_P0019935 Nbeal1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019936.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67543339 67546557 + Nbeal1 protein_coding retained_intron MGP_NODShiLtJ_T0019937.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67556714 67570020 + MGP_NODShiLtJ_P0019937 Nbeal1 protein_coding protein_coding MGP_NODShiLtJ_T0019938.1 MGP_NODShiLtJ_G0015940.1 mouse_genomes_project 1 67561916 67564178 + Nbeal1 protein_coding retained_intron MGP_NODShiLtJ_T0000493.1 MGP_NODShiLtJ_G0000429.1 mouse_genomes_project 1 74895786 74897967 + TEC TEC MGP_NODShiLtJ_T0005795.1 MGP_NODShiLtJ_G0004857.1 mouse_genomes_project 1 114651387 114673725 + Gm20268 lincRNA lincRNA MGP_NODShiLtJ_T0023384.1 MGP_NODShiLtJ_G0016656.1 mouse_genomes_project 1 197942107 197949665 + MGP_NODShiLtJ_P0023384 Pigm protein_coding protein_coding MGP_NODShiLtJ_T0005659.1 MGP_NODShiLtJ_G0004749.1 mouse_genomes_project 1 51997567 52033048 + Gm28826 lincRNA lincRNA MGP_NODShiLtJ_T0020078.1 MGP_NODShiLtJ_G0015970.1 mouse_genomes_project 1 72856038 72858108 - MGP_NODShiLtJ_P0020078 Crygb protein_coding protein_coding MGP_NODShiLtJ_T0011944.1 MGP_NODShiLtJ_G0010052.1 mouse_genomes_project 1 68260119 68260644 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098572.1 MGP_NODShiLtJ_G0036966.1 mouse_genomes_project 1 174534179 174534286 - Gm22756 snRNA snRNA MGP_NODShiLtJ_T0002855.1 MGP_NODShiLtJ_G0002687.1 mouse_genomes_project 1 155762614 155777738 + Gm26781 antisense antisense MGP_NODShiLtJ_T0000779.1 MGP_NODShiLtJ_G0000710.1 mouse_genomes_project 1 220992677 220994898 - TEC TEC MGP_NODShiLtJ_T0020618.1 MGP_NODShiLtJ_G0016062.1 mouse_genomes_project 1 87785893 87892311 - MGP_NODShiLtJ_P0020618 Pax3 protein_coding protein_coding MGP_NODShiLtJ_T0020619.1 MGP_NODShiLtJ_G0016062.1 mouse_genomes_project 1 87785896 87892607 - MGP_NODShiLtJ_P0020619 Pax3 protein_coding protein_coding MGP_NODShiLtJ_T0020620.1 MGP_NODShiLtJ_G0016062.1 mouse_genomes_project 1 87878927 87892586 - Pax3 protein_coding processed_transcript MGP_NODShiLtJ_T0000748.1 MGP_NODShiLtJ_G0000681.1 mouse_genomes_project 1 208304182 208305493 + TEC TEC MGP_NODShiLtJ_T0024001.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218650035 218668029 - MGP_NODShiLtJ_P0024001 Tatdn3 protein_coding protein_coding MGP_NODShiLtJ_T0024002.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218650047 218668001 - MGP_NODShiLtJ_P0024002 Tatdn3 protein_coding protein_coding MGP_NODShiLtJ_T0024003.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218650051 218668002 - MGP_NODShiLtJ_P0024003 Tatdn3 protein_coding protein_coding MGP_NODShiLtJ_T0024004.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218650051 218668001 - MGP_NODShiLtJ_P0024004 Tatdn3 protein_coding protein_coding MGP_NODShiLtJ_T0024005.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218650054 218653991 - Tatdn3 protein_coding retained_intron MGP_NODShiLtJ_T0024006.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218660049 218663939 - Tatdn3 protein_coding retained_intron MGP_NODShiLtJ_T0024007.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218662991 218664534 - Tatdn3 protein_coding retained_intron MGP_NODShiLtJ_T0024008.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218663873 218668001 - Tatdn3 protein_coding retained_intron MGP_NODShiLtJ_T0024009.1 MGP_NODShiLtJ_G0016806.1 mouse_genomes_project 1 218665157 218668001 - Tatdn3 protein_coding retained_intron MGP_NODShiLtJ_T0099782.1 MGP_NODShiLtJ_G0038176.1 mouse_genomes_project 1 115858447 115858579 - Gm24122 snoRNA snoRNA MGP_NODShiLtJ_T0002931.1 MGP_NODShiLtJ_G0002748.1 mouse_genomes_project 1 214235414 214238495 - Gm37912 antisense antisense MGP_NODShiLtJ_T0009431.1 MGP_NODShiLtJ_G0007564.1 mouse_genomes_project 1 108680240 108680350 + Gm22917 miRNA miRNA MGP_NODShiLtJ_T0000353.1 MGP_NODShiLtJ_G0000291.1 mouse_genomes_project 1 2338394 2339505 - TEC TEC MGP_NODShiLtJ_T0000619.1 MGP_NODShiLtJ_G0000554.1 mouse_genomes_project 1 153061100 153064306 - TEC TEC MGP_NODShiLtJ_T0097732.1 MGP_NODShiLtJ_G0036144.1 mouse_genomes_project 1 137057336 137059136 + pseudogene pseudogene MGP_NODShiLtJ_T0019060.1 MGP_NODShiLtJ_G0015780.1 mouse_genomes_project 1 37809549 37949294 + MGP_NODShiLtJ_P0019060 protein_coding protein_coding MGP_NODShiLtJ_T0019061.1 MGP_NODShiLtJ_G0015780.1 mouse_genomes_project 1 37865192 37948384 + MGP_NODShiLtJ_P0019061 protein_coding protein_coding MGP_NODShiLtJ_T0019062.1 MGP_NODShiLtJ_G0015780.1 mouse_genomes_project 1 37884259 37943709 + MGP_NODShiLtJ_P0019062 protein_coding protein_coding MGP_NODShiLtJ_T0019063.1 MGP_NODShiLtJ_G0015780.1 mouse_genomes_project 1 37938329 37949870 + MGP_NODShiLtJ_P0019063 protein_coding protein_coding MGP_NODShiLtJ_T0019064.1 MGP_NODShiLtJ_G0015780.1 mouse_genomes_project 1 37938346 37945782 + protein_coding retained_intron MGP_NODShiLtJ_T0019065.1 MGP_NODShiLtJ_G0015780.1 mouse_genomes_project 1 37938347 37943263 + protein_coding retained_intron MGP_NODShiLtJ_T0019066.1 MGP_NODShiLtJ_G0015780.1 mouse_genomes_project 1 37938366 37945476 + MGP_NODShiLtJ_P0019066 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000765.1 MGP_NODShiLtJ_G0000697.1 mouse_genomes_project 1 214347355 214349623 - TEC TEC MGP_NODShiLtJ_T0005864.1 MGP_NODShiLtJ_G0004912.1 mouse_genomes_project 1 157687679 157693978 + lincRNA lincRNA MGP_NODShiLtJ_T0016925.1 MGP_NODShiLtJ_G0014986.1 mouse_genomes_project 1 158794980 158798575 + Gm37423 processed_transcript retained_intron MGP_NODShiLtJ_T0022912.1 MGP_NODShiLtJ_G0016548.1 mouse_genomes_project 1 188924667 188947033 + MGP_NODShiLtJ_P0022912 Sell protein_coding protein_coding MGP_NODShiLtJ_T0022913.1 MGP_NODShiLtJ_G0016548.1 mouse_genomes_project 1 188924770 188943379 + MGP_NODShiLtJ_P0022913 Sell protein_coding protein_coding MGP_NODShiLtJ_T0022914.1 MGP_NODShiLtJ_G0016548.1 mouse_genomes_project 1 188924874 188942399 + MGP_NODShiLtJ_P0022914 Sell protein_coding protein_coding MGP_NODShiLtJ_T0022915.1 MGP_NODShiLtJ_G0016548.1 mouse_genomes_project 1 188931641 188942703 + MGP_NODShiLtJ_P0022915 Sell protein_coding protein_coding MGP_NODShiLtJ_T0022882.1 MGP_NODShiLtJ_G0016539.1 mouse_genomes_project 1 187773404 187847312 - MGP_NODShiLtJ_P0022882 Mroh9 protein_coding protein_coding MGP_NODShiLtJ_T0012018.1 MGP_NODShiLtJ_G0010126.1 mouse_genomes_project 1 100335062 100335305 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005677.1 MGP_NODShiLtJ_G0004762.1 mouse_genomes_project 1 64027032 64029095 + 1700126A01Rik lincRNA lincRNA MGP_NODShiLtJ_T0005823.1 MGP_NODShiLtJ_G0004879.1 mouse_genomes_project 1 138545627 138555075 - Gm29348 lincRNA lincRNA MGP_NODShiLtJ_T0011784.1 MGP_NODShiLtJ_G0009892.1 mouse_genomes_project 1 15757870 15758553 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000713.1 MGP_NODShiLtJ_G0000647.1 mouse_genomes_project 1 190466439 190467473 + TEC TEC MGP_NODShiLtJ_T0021741.1 MGP_NODShiLtJ_G0016313.1 mouse_genomes_project 1 149761552 149775401 + MGP_NODShiLtJ_P0021741 Fcamr protein_coding protein_coding MGP_NODShiLtJ_T0021742.1 MGP_NODShiLtJ_G0016313.1 mouse_genomes_project 1 149761552 149775369 + MGP_NODShiLtJ_P0021742 Fcamr protein_coding protein_coding MGP_NODShiLtJ_T0011147.1 MGP_NODShiLtJ_G0009280.1 mouse_genomes_project 1 190496928 190497179 - Gm23599 misc_RNA misc_RNA MGP_NODShiLtJ_T0022435.1 MGP_NODShiLtJ_G0016462.1 mouse_genomes_project 1 176407643 176448207 + MGP_NODShiLtJ_P0022435 Ncf2 protein_coding protein_coding MGP_NODShiLtJ_T0022436.1 MGP_NODShiLtJ_G0016462.1 mouse_genomes_project 1 176416168 176435524 + MGP_NODShiLtJ_P0022436 Ncf2 protein_coding protein_coding MGP_NODShiLtJ_T0022437.1 MGP_NODShiLtJ_G0016462.1 mouse_genomes_project 1 176416221 176448206 + MGP_NODShiLtJ_P0022437 Ncf2 protein_coding protein_coding MGP_NODShiLtJ_T0022438.1 MGP_NODShiLtJ_G0016462.1 mouse_genomes_project 1 176416309 176420970 + Ncf2 protein_coding retained_intron MGP_NODShiLtJ_T0022439.1 MGP_NODShiLtJ_G0016462.1 mouse_genomes_project 1 176419221 176435523 + Ncf2 protein_coding retained_intron MGP_NODShiLtJ_T0022440.1 MGP_NODShiLtJ_G0016462.1 mouse_genomes_project 1 176434800 176435716 + Ncf2 protein_coding retained_intron MGP_NODShiLtJ_T0022745.1 MGP_NODShiLtJ_G0016515.1 mouse_genomes_project 1 185525077 185528263 + Serpinc1 protein_coding retained_intron MGP_NODShiLtJ_T0022746.1 MGP_NODShiLtJ_G0016515.1 mouse_genomes_project 1 185525098 185546145 + MGP_NODShiLtJ_P0022746 Serpinc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022747.1 MGP_NODShiLtJ_G0016515.1 mouse_genomes_project 1 185525180 185538448 + MGP_NODShiLtJ_P0022747 Serpinc1 protein_coding protein_coding MGP_NODShiLtJ_T0022748.1 MGP_NODShiLtJ_G0016515.1 mouse_genomes_project 1 185533552 185546174 + MGP_NODShiLtJ_P0022748 Serpinc1 protein_coding protein_coding MGP_NODShiLtJ_T0022749.1 MGP_NODShiLtJ_G0016515.1 mouse_genomes_project 1 185535876 185538538 + Serpinc1 protein_coding retained_intron MGP_NODShiLtJ_T0022750.1 MGP_NODShiLtJ_G0016515.1 mouse_genomes_project 1 185536332 185555964 + MGP_NODShiLtJ_P0022750 Serpinc1 protein_coding protein_coding MGP_NODShiLtJ_T0022751.1 MGP_NODShiLtJ_G0016515.1 mouse_genomes_project 1 185538166 185551269 + MGP_NODShiLtJ_P0022751 Serpinc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023209.1 MGP_NODShiLtJ_G0016619.1 mouse_genomes_project 1 196716952 196727281 + MGP_NODShiLtJ_P0023209 Adamts4 protein_coding protein_coding MGP_NODShiLtJ_T0023210.1 MGP_NODShiLtJ_G0016619.1 mouse_genomes_project 1 196718648 196727281 + MGP_NODShiLtJ_P0023210 Adamts4 protein_coding protein_coding MGP_NODShiLtJ_T0000468.1 MGP_NODShiLtJ_G0000404.1 mouse_genomes_project 1 65895985 65901255 + TEC TEC MGP_NODShiLtJ_T0009394.1 MGP_NODShiLtJ_G0007527.1 mouse_genomes_project 1 47007591 47007676 + Gm24001 miRNA miRNA MGP_NODShiLtJ_T0023965.1 MGP_NODShiLtJ_G0016799.1 mouse_genomes_project 1 217375223 217423460 - MGP_NODShiLtJ_P0023965 Smyd2 protein_coding protein_coding MGP_NODShiLtJ_T0023966.1 MGP_NODShiLtJ_G0016799.1 mouse_genomes_project 1 217375225 217383734 - Smyd2 protein_coding processed_transcript MGP_NODShiLtJ_T0023967.1 MGP_NODShiLtJ_G0016799.1 mouse_genomes_project 1 217375373 217377104 - Smyd2 protein_coding retained_intron MGP_NODShiLtJ_T0023968.1 MGP_NODShiLtJ_G0016799.1 mouse_genomes_project 1 217379777 217423350 - Smyd2 protein_coding retained_intron MGP_NODShiLtJ_T0098220.1 MGP_NODShiLtJ_G0036632.1 mouse_genomes_project 1 57236805 57239082 + Gm28320 sense_intronic sense_intronic MGP_NODShiLtJ_T0011975.1 MGP_NODShiLtJ_G0010083.1 mouse_genomes_project 1 80322448 80323223 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002945.1 MGP_NODShiLtJ_G0002760.1 mouse_genomes_project 1 219497690 219499311 - Gm38037 antisense antisense MGP_NODShiLtJ_T0022426.1 MGP_NODShiLtJ_G0016459.1 mouse_genomes_project 1 176099765 176370450 - MGP_NODShiLtJ_P0022426 Rgl1 protein_coding protein_coding MGP_NODShiLtJ_T0022427.1 MGP_NODShiLtJ_G0016459.1 mouse_genomes_project 1 176099956 176215027 - MGP_NODShiLtJ_P0022427 Rgl1 protein_coding protein_coding MGP_NODShiLtJ_T0022428.1 MGP_NODShiLtJ_G0016459.1 mouse_genomes_project 1 176103410 176370496 - MGP_NODShiLtJ_P0022428 Rgl1 protein_coding protein_coding MGP_NODShiLtJ_T0022429.1 MGP_NODShiLtJ_G0016459.1 mouse_genomes_project 1 176138199 176139736 - Rgl1 protein_coding retained_intron MGP_NODShiLtJ_T0022430.1 MGP_NODShiLtJ_G0016459.1 mouse_genomes_project 1 176144230 176182578 - Rgl1 protein_coding processed_transcript MGP_NODShiLtJ_T0022431.1 MGP_NODShiLtJ_G0016459.1 mouse_genomes_project 1 176144230 176214839 - MGP_NODShiLtJ_P0022431 Rgl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018903.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22441074 23010386 - MGP_NODShiLtJ_P0018903 protein_coding protein_coding MGP_NODShiLtJ_T0018904.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22441074 23010386 - MGP_NODShiLtJ_P0018904 protein_coding protein_coding MGP_NODShiLtJ_T0018905.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22441074 23010386 - MGP_NODShiLtJ_P0018905 protein_coding protein_coding MGP_NODShiLtJ_T0018906.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22441074 23010386 - MGP_NODShiLtJ_P0018906 protein_coding protein_coding MGP_NODShiLtJ_T0018907.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22441074 23010386 - MGP_NODShiLtJ_P0018907 protein_coding protein_coding MGP_NODShiLtJ_T0018908.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22441738 22473929 - MGP_NODShiLtJ_P0018908 protein_coding protein_coding MGP_NODShiLtJ_T0018909.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22443245 23010386 - MGP_NODShiLtJ_P0018909 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018910.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22443245 22613392 - MGP_NODShiLtJ_P0018910 protein_coding protein_coding MGP_NODShiLtJ_T0018911.1 MGP_NODShiLtJ_G0015748.1 mouse_genomes_project 1 22623725 23010386 - MGP_NODShiLtJ_P0018911 protein_coding protein_coding MGP_NODShiLtJ_T0020646.1 MGP_NODShiLtJ_G0016069.1 mouse_genomes_project 1 88577888 88581159 + MGP_NODShiLtJ_P0020646 Kcne4 protein_coding protein_coding MGP_NODShiLtJ_T0020647.1 MGP_NODShiLtJ_G0016069.1 mouse_genomes_project 1 88578057 88581159 + MGP_NODShiLtJ_P0020647 Kcne4 protein_coding protein_coding MGP_NODShiLtJ_T0021336.1 MGP_NODShiLtJ_G0016221.1 mouse_genomes_project 1 105584217 105640744 + MGP_NODShiLtJ_P0021336 protein_coding protein_coding MGP_NODShiLtJ_T0000408.1 MGP_NODShiLtJ_G0000345.1 mouse_genomes_project 1 26381239 26384749 - TEC TEC MGP_NODShiLtJ_T0101469.1 MGP_NODShiLtJ_G0039639.1 mouse_genomes_project 1 58278045 58278933 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0023582.1 MGP_NODShiLtJ_G0016722.1 mouse_genomes_project 1 204875782 204892834 - MGP_NODShiLtJ_P0023582 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023583.1 MGP_NODShiLtJ_G0016722.1 mouse_genomes_project 1 204875842 204885727 - MGP_NODShiLtJ_P0023583 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023584.1 MGP_NODShiLtJ_G0016722.1 mouse_genomes_project 1 204876328 204883746 - MGP_NODShiLtJ_P0023584 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011951.1 MGP_NODShiLtJ_G0010059.1 mouse_genomes_project 1 70200568 70201655 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021006.1 MGP_NODShiLtJ_G0016146.1 mouse_genomes_project 1 99051159 99341804 + MGP_NODShiLtJ_P0021006 protein_coding protein_coding MGP_NODShiLtJ_T0021007.1 MGP_NODShiLtJ_G0016146.1 mouse_genomes_project 1 99051161 99345401 + MGP_NODShiLtJ_P0021007 protein_coding protein_coding MGP_NODShiLtJ_T0021008.1 MGP_NODShiLtJ_G0016146.1 mouse_genomes_project 1 99051211 99343825 + MGP_NODShiLtJ_P0021008 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021009.1 MGP_NODShiLtJ_G0016146.1 mouse_genomes_project 1 99064935 99345401 + MGP_NODShiLtJ_P0021009 protein_coding protein_coding MGP_NODShiLtJ_T0098549.1 MGP_NODShiLtJ_G0036943.1 mouse_genomes_project 1 112023635 112023735 + Gm23434 snRNA snRNA MGP_NODShiLtJ_T0012213.1 MGP_NODShiLtJ_G0010321.1 mouse_genomes_project 1 196837817 196838153 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011922.1 MGP_NODShiLtJ_G0010030.1 mouse_genomes_project 1 62110124 62110472 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023923.1 MGP_NODShiLtJ_G0016793.1 mouse_genomes_project 1 214917910 215389485 + MGP_NODShiLtJ_P0023923 Esrrg protein_coding protein_coding MGP_NODShiLtJ_T0023924.1 MGP_NODShiLtJ_G0016793.1 mouse_genomes_project 1 214918148 215579669 + MGP_NODShiLtJ_P0023924 Esrrg protein_coding protein_coding MGP_NODShiLtJ_T0023925.1 MGP_NODShiLtJ_G0016793.1 mouse_genomes_project 1 214918814 215118999 + Esrrg protein_coding processed_transcript MGP_NODShiLtJ_T0023926.1 MGP_NODShiLtJ_G0016793.1 mouse_genomes_project 1 215336512 215580032 + MGP_NODShiLtJ_P0023926 Esrrg protein_coding protein_coding MGP_NODShiLtJ_T0023927.1 MGP_NODShiLtJ_G0016793.1 mouse_genomes_project 1 215336553 215580031 + MGP_NODShiLtJ_P0023927 Esrrg protein_coding protein_coding MGP_NODShiLtJ_T0099750.1 MGP_NODShiLtJ_G0038144.1 mouse_genomes_project 1 43061424 43061639 + Gm24826 snoRNA snoRNA MGP_NODShiLtJ_T0002715.1 MGP_NODShiLtJ_G0002581.1 mouse_genomes_project 1 16864202 16896509 - Gm28154 antisense antisense MGP_NODShiLtJ_T0005618.1 MGP_NODShiLtJ_G0004724.1 mouse_genomes_project 1 38849598 38877609 - Gm37068 lincRNA lincRNA MGP_NODShiLtJ_T0012083.1 MGP_NODShiLtJ_G0010191.1 mouse_genomes_project 1 135703739 135704902 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098237.1 MGP_NODShiLtJ_G0036648.1 mouse_genomes_project 1 164998194 165001860 + Gm29170 sense_intronic sense_intronic MGP_NODShiLtJ_T0012042.1 MGP_NODShiLtJ_G0010150.1 mouse_genomes_project 1 115424366 115425096 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022033.1 MGP_NODShiLtJ_G0016380.1 mouse_genomes_project 1 153807889 153818924 + Klhl12 protein_coding retained_intron MGP_NODShiLtJ_T0022034.1 MGP_NODShiLtJ_G0016380.1 mouse_genomes_project 1 153807889 153843968 + MGP_NODShiLtJ_P0022034 Klhl12 protein_coding protein_coding MGP_NODShiLtJ_T0022035.1 MGP_NODShiLtJ_G0016380.1 mouse_genomes_project 1 153807889 153844113 + MGP_NODShiLtJ_P0022035 Klhl12 protein_coding protein_coding MGP_NODShiLtJ_T0022036.1 MGP_NODShiLtJ_G0016380.1 mouse_genomes_project 1 153807913 153843968 + MGP_NODShiLtJ_P0022036 Klhl12 protein_coding protein_coding MGP_NODShiLtJ_T0022037.1 MGP_NODShiLtJ_G0016380.1 mouse_genomes_project 1 153820971 153825982 + Klhl12 protein_coding retained_intron MGP_NODShiLtJ_T0022038.1 MGP_NODShiLtJ_G0016380.1 mouse_genomes_project 1 153827391 153838629 + Klhl12 protein_coding retained_intron MGP_NODShiLtJ_T0022595.1 MGP_NODShiLtJ_G0016491.1 mouse_genomes_project 1 180163598 180213196 - MGP_NODShiLtJ_P0022595 Tdrd5 protein_coding protein_coding MGP_NODShiLtJ_T0022596.1 MGP_NODShiLtJ_G0016491.1 mouse_genomes_project 1 180163600 180212880 - MGP_NODShiLtJ_P0022596 Tdrd5 protein_coding protein_coding MGP_NODShiLtJ_T0022597.1 MGP_NODShiLtJ_G0016491.1 mouse_genomes_project 1 180168320 180172088 - Tdrd5 protein_coding processed_transcript MGP_NODShiLtJ_T0022598.1 MGP_NODShiLtJ_G0016491.1 mouse_genomes_project 1 180175586 180182959 - Tdrd5 protein_coding retained_intron MGP_NODShiLtJ_T0022599.1 MGP_NODShiLtJ_G0016491.1 mouse_genomes_project 1 180203966 180213138 - MGP_NODShiLtJ_P0022599 Tdrd5 protein_coding protein_coding MGP_NODShiLtJ_T0009434.1 MGP_NODShiLtJ_G0007567.1 mouse_genomes_project 1 120066835 120066931 + Gm22426 miRNA miRNA MGP_NODShiLtJ_T0005702.1 MGP_NODShiLtJ_G0004782.1 mouse_genomes_project 1 71891404 72019425 - Gm28981 lincRNA lincRNA MGP_NODShiLtJ_T0019375.1 MGP_NODShiLtJ_G0015837.1 mouse_genomes_project 1 44324571 44421027 + MGP_NODShiLtJ_P0019375 Slc9a2 protein_coding protein_coding MGP_NODShiLtJ_T0019376.1 MGP_NODShiLtJ_G0015837.1 mouse_genomes_project 1 44326794 44374247 + MGP_NODShiLtJ_P0019376 Slc9a2 protein_coding protein_coding MGP_NODShiLtJ_T0019377.1 MGP_NODShiLtJ_G0015837.1 mouse_genomes_project 1 44406315 44407631 + Slc9a2 protein_coding retained_intron MGP_NODShiLtJ_T0022167.1 MGP_NODShiLtJ_G0016406.1 mouse_genomes_project 1 155537996 155538563 + MGP_NODShiLtJ_P0022167 Ascl5 protein_coding protein_coding MGP_NODShiLtJ_T0002744.1 MGP_NODShiLtJ_G0002604.1 mouse_genomes_project 1 43667342 43677853 - Gm16894 antisense antisense MGP_NODShiLtJ_T0000623.1 MGP_NODShiLtJ_G0000558.1 mouse_genomes_project 1 154182024 154184115 - TEC TEC MGP_NODShiLtJ_T0019682.1 MGP_NODShiLtJ_G0015897.1 mouse_genomes_project 1 61843677 61867497 + MGP_NODShiLtJ_P0019682 Mob4 protein_coding protein_coding MGP_NODShiLtJ_T0019683.1 MGP_NODShiLtJ_G0015897.1 mouse_genomes_project 1 61843677 61866562 + MGP_NODShiLtJ_P0019683 Mob4 protein_coding protein_coding MGP_NODShiLtJ_T0019684.1 MGP_NODShiLtJ_G0015897.1 mouse_genomes_project 1 61843706 61867496 + Mob4 protein_coding retained_intron MGP_NODShiLtJ_T0019685.1 MGP_NODShiLtJ_G0015897.1 mouse_genomes_project 1 61843728 61865623 + MGP_NODShiLtJ_P0019685 Mob4 protein_coding protein_coding MGP_NODShiLtJ_T0019686.1 MGP_NODShiLtJ_G0015897.1 mouse_genomes_project 1 61843733 61865983 + MGP_NODShiLtJ_P0019686 Mob4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019687.1 MGP_NODShiLtJ_G0015897.1 mouse_genomes_project 1 61843766 61865407 + MGP_NODShiLtJ_P0019687 Mob4 protein_coding protein_coding MGP_NODShiLtJ_T0019688.1 MGP_NODShiLtJ_G0015897.1 mouse_genomes_project 1 61843772 61857271 + Mob4 protein_coding retained_intron MGP_NODShiLtJ_T0019689.1 MGP_NODShiLtJ_G0015897.1 mouse_genomes_project 1 61860243 61861130 + Mob4 protein_coding retained_intron MGP_NODShiLtJ_T0011898.1 MGP_NODShiLtJ_G0010006.1 mouse_genomes_project 1 54735671 54736666 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020976.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98703563 98729270 + Sag protein_coding retained_intron MGP_NODShiLtJ_T0020977.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98703563 98741453 + Sag protein_coding retained_intron MGP_NODShiLtJ_T0020978.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98703563 98741939 + Sag protein_coding retained_intron MGP_NODShiLtJ_T0020979.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98703563 98720140 + Sag protein_coding retained_intron MGP_NODShiLtJ_T0020980.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98703563 98761571 + MGP_NODShiLtJ_P0020980 Sag protein_coding protein_coding MGP_NODShiLtJ_T0020981.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98703563 98761706 + MGP_NODShiLtJ_P0020981 Sag protein_coding protein_coding MGP_NODShiLtJ_T0020982.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98714440 98728629 + Sag protein_coding processed_transcript MGP_NODShiLtJ_T0020983.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98725522 98728639 + Sag protein_coding processed_transcript MGP_NODShiLtJ_T0020984.1 MGP_NODShiLtJ_G0016140.1 mouse_genomes_project 1 98730459 98741957 + Sag protein_coding retained_intron MGP_NODShiLtJ_T0022280.1 MGP_NODShiLtJ_G0016432.1 mouse_genomes_project 1 164801285 164926356 - MGP_NODShiLtJ_P0022280 Cdc73 protein_coding protein_coding MGP_NODShiLtJ_T0022281.1 MGP_NODShiLtJ_G0016432.1 mouse_genomes_project 1 164842463 164845182 - Cdc73 protein_coding retained_intron MGP_NODShiLtJ_T0022282.1 MGP_NODShiLtJ_G0016432.1 mouse_genomes_project 1 164850725 164853780 - Cdc73 protein_coding retained_intron MGP_NODShiLtJ_T0002876.1 MGP_NODShiLtJ_G0002704.1 mouse_genomes_project 1 184277586 184280923 - Gm38039 antisense antisense MGP_NODShiLtJ_T0012080.1 MGP_NODShiLtJ_G0010188.1 mouse_genomes_project 1 133891501 133891901 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012243.1 MGP_NODShiLtJ_G0010351.1 mouse_genomes_project 1 216501514 216504434 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005841.1 MGP_NODShiLtJ_G0004893.1 mouse_genomes_project 1 151320712 151323446 - 1700037F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0002946.1 MGP_NODShiLtJ_G0002761.1 mouse_genomes_project 1 219566544 219582443 - 1700034H15Rik antisense antisense MGP_NODShiLtJ_T0002947.1 MGP_NODShiLtJ_G0002761.1 mouse_genomes_project 1 219570646 219580682 - 1700034H15Rik antisense antisense MGP_NODShiLtJ_T0002948.1 MGP_NODShiLtJ_G0002761.1 mouse_genomes_project 1 219570648 219580809 - 1700034H15Rik antisense antisense MGP_NODShiLtJ_T0002949.1 MGP_NODShiLtJ_G0002761.1 mouse_genomes_project 1 219570837 219583276 - 1700034H15Rik antisense antisense MGP_NODShiLtJ_T0002950.1 MGP_NODShiLtJ_G0002761.1 mouse_genomes_project 1 219574535 219591472 - 1700034H15Rik antisense antisense MGP_NODShiLtJ_T0002951.1 MGP_NODShiLtJ_G0002761.1 mouse_genomes_project 1 219581526 219591480 - 1700034H15Rik antisense antisense MGP_NODShiLtJ_T0000599.1 MGP_NODShiLtJ_G0000535.1 mouse_genomes_project 1 146731318 146733814 + TEC TEC MGP_NODShiLtJ_T0021344.1 MGP_NODShiLtJ_G0016225.1 mouse_genomes_project 1 105661819 105677134 - MGP_NODShiLtJ_P0021344 Pdcd1 protein_coding protein_coding MGP_NODShiLtJ_T0002796.1 MGP_NODShiLtJ_G0002641.1 mouse_genomes_project 1 96193341 96193779 + Gm16094 antisense antisense MGP_NODShiLtJ_T0020992.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98869532 98901210 - MGP_NODShiLtJ_P0020992 Usp40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020993.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98869534 98936228 - MGP_NODShiLtJ_P0020993 Usp40 protein_coding protein_coding MGP_NODShiLtJ_T0020994.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98870858 98936211 - MGP_NODShiLtJ_P0020994 Usp40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020995.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98870858 98936211 - MGP_NODShiLtJ_P0020995 Usp40 protein_coding protein_coding MGP_NODShiLtJ_T0020996.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98874117 98876092 - Usp40 protein_coding retained_intron MGP_NODShiLtJ_T0020997.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98889715 98891892 - Usp40 protein_coding retained_intron MGP_NODShiLtJ_T0020998.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98912085 98936205 - Usp40 protein_coding retained_intron MGP_NODShiLtJ_T0020999.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98933579 98936227 - Usp40 protein_coding retained_intron MGP_NODShiLtJ_T0021000.1 MGP_NODShiLtJ_G0016142.1 mouse_genomes_project 1 98933579 98935906 - Usp40 protein_coding retained_intron MGP_NODShiLtJ_T0022043.1 MGP_NODShiLtJ_G0016383.1 mouse_genomes_project 1 153921496 154001863 + MGP_NODShiLtJ_P0022043 Kdm5b protein_coding protein_coding MGP_NODShiLtJ_T0022044.1 MGP_NODShiLtJ_G0016383.1 mouse_genomes_project 1 153921502 153997398 + MGP_NODShiLtJ_P0022044 Kdm5b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022045.1 MGP_NODShiLtJ_G0016383.1 mouse_genomes_project 1 153921517 153998110 + MGP_NODShiLtJ_P0022045 Kdm5b protein_coding protein_coding MGP_NODShiLtJ_T0022046.1 MGP_NODShiLtJ_G0016383.1 mouse_genomes_project 1 153921532 153973376 + Kdm5b protein_coding retained_intron MGP_NODShiLtJ_T0022047.1 MGP_NODShiLtJ_G0016383.1 mouse_genomes_project 1 153954456 153957167 + Kdm5b protein_coding retained_intron MGP_NODShiLtJ_T0022048.1 MGP_NODShiLtJ_G0016383.1 mouse_genomes_project 1 153988473 153991695 + Kdm5b protein_coding retained_intron MGP_NODShiLtJ_T0022049.1 MGP_NODShiLtJ_G0016383.1 mouse_genomes_project 1 153989391 153993795 + Kdm5b protein_coding retained_intron MGP_NODShiLtJ_T0018884.1 MGP_NODShiLtJ_G0015741.1 mouse_genomes_project 1 20888014 20970802 - MGP_NODShiLtJ_P0018884 Tram2 protein_coding protein_coding MGP_NODShiLtJ_T0018885.1 MGP_NODShiLtJ_G0015741.1 mouse_genomes_project 1 20895997 20934452 - Tram2 protein_coding processed_transcript MGP_NODShiLtJ_T0012001.1 MGP_NODShiLtJ_G0010109.1 mouse_genomes_project 1 93159027 93159418 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020956.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98510749 98525768 + Inpp5d protein_coding retained_intron MGP_NODShiLtJ_T0020957.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98510755 98620298 + MGP_NODShiLtJ_P0020957 Inpp5d protein_coding protein_coding MGP_NODShiLtJ_T0020958.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98510782 98537045 + Inpp5d protein_coding processed_transcript MGP_NODShiLtJ_T0020959.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98510791 98620298 + MGP_NODShiLtJ_P0020959 Inpp5d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020960.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98510792 98619489 + MGP_NODShiLtJ_P0020960 Inpp5d protein_coding protein_coding MGP_NODShiLtJ_T0020961.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98510882 98620305 + MGP_NODShiLtJ_P0020961 Inpp5d protein_coding protein_coding MGP_NODShiLtJ_T0020962.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98511020 98562594 + MGP_NODShiLtJ_P0020962 Inpp5d protein_coding protein_coding MGP_NODShiLtJ_T0020963.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98512069 98562518 + MGP_NODShiLtJ_P0020963 Inpp5d protein_coding protein_coding MGP_NODShiLtJ_T0020964.1 MGP_NODShiLtJ_G0016138.1 mouse_genomes_project 1 98609172 98611945 + Inpp5d protein_coding processed_transcript MGP_NODShiLtJ_T0023762.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208851235 208992546 - MGP_NODShiLtJ_P0023762 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023763.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208859217 208992875 - MGP_NODShiLtJ_P0023763 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023764.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208859276 208992865 - MGP_NODShiLtJ_P0023764 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023765.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208859276 208992865 - MGP_NODShiLtJ_P0023765 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023766.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208860155 208864884 - Enah protein_coding retained_intron MGP_NODShiLtJ_T0023767.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208860309 208863306 - Enah protein_coding retained_intron MGP_NODShiLtJ_T0023768.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208860337 208987229 - MGP_NODShiLtJ_P0023768 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023769.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208860344 208992546 - MGP_NODShiLtJ_P0023769 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023770.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208860344 208992546 - MGP_NODShiLtJ_P0023770 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023771.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208860344 208992546 - MGP_NODShiLtJ_P0023771 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023772.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208860539 208873848 - Enah protein_coding retained_intron MGP_NODShiLtJ_T0023773.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208867187 208869077 - Enah protein_coding retained_intron MGP_NODShiLtJ_T0023774.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208875926 208880213 - MGP_NODShiLtJ_P0023774 Enah protein_coding protein_coding MGP_NODShiLtJ_T0023775.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208879647 208922982 - Enah protein_coding retained_intron MGP_NODShiLtJ_T0023776.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208896601 208903131 - Enah protein_coding retained_intron MGP_NODShiLtJ_T0023777.1 MGP_NODShiLtJ_G0016758.1 mouse_genomes_project 1 208922580 208992561 - Enah protein_coding retained_intron MGP_NODShiLtJ_T0019478.1 MGP_NODShiLtJ_G0015859.1 mouse_genomes_project 1 49667019 49849433 - MGP_NODShiLtJ_P0019478 Col5a2 protein_coding protein_coding MGP_NODShiLtJ_T0019479.1 MGP_NODShiLtJ_G0015859.1 mouse_genomes_project 1 49697449 49702325 - Col5a2 protein_coding retained_intron MGP_NODShiLtJ_T0019480.1 MGP_NODShiLtJ_G0015859.1 mouse_genomes_project 1 49724363 49849433 - Col5a2 protein_coding retained_intron MGP_NODShiLtJ_T0019481.1 MGP_NODShiLtJ_G0015859.1 mouse_genomes_project 1 49733981 49739774 - Col5a2 protein_coding retained_intron MGP_NODShiLtJ_T0019108.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39635203 39669213 - MGP_NODShiLtJ_P0019108 Kansl3 protein_coding protein_coding MGP_NODShiLtJ_T0019109.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39635203 39669189 - MGP_NODShiLtJ_P0019109 Kansl3 protein_coding protein_coding MGP_NODShiLtJ_T0019110.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39637046 39669203 - MGP_NODShiLtJ_P0019110 Kansl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019111.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39637046 39668046 - MGP_NODShiLtJ_P0019111 Kansl3 protein_coding protein_coding MGP_NODShiLtJ_T0019112.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39653845 39668073 - MGP_NODShiLtJ_P0019112 Kansl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019113.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39657285 39669187 - MGP_NODShiLtJ_P0019113 Kansl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019114.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39665659 39668073 - MGP_NODShiLtJ_P0019114 Kansl3 protein_coding protein_coding MGP_NODShiLtJ_T0019115.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39665942 39669189 - Kansl3 protein_coding retained_intron MGP_NODShiLtJ_T0019116.1 MGP_NODShiLtJ_G0015787.1 mouse_genomes_project 1 39667997 39669134 - MGP_NODShiLtJ_P0019116 Kansl3 protein_coding protein_coding MGP_NODShiLtJ_T0019244.1 MGP_NODShiLtJ_G0015810.1 mouse_genomes_project 1 41333428 41341490 + MGP_NODShiLtJ_P0019244 Mrpl30 protein_coding protein_coding MGP_NODShiLtJ_T0019245.1 MGP_NODShiLtJ_G0015810.1 mouse_genomes_project 1 41333483 41341319 + MGP_NODShiLtJ_P0019245 Mrpl30 protein_coding protein_coding MGP_NODShiLtJ_T0019246.1 MGP_NODShiLtJ_G0015810.1 mouse_genomes_project 1 41333484 41336199 + Mrpl30 protein_coding retained_intron MGP_NODShiLtJ_T0019247.1 MGP_NODShiLtJ_G0015810.1 mouse_genomes_project 1 41333494 41336937 + MGP_NODShiLtJ_P0019247 Mrpl30 protein_coding protein_coding MGP_NODShiLtJ_T0019248.1 MGP_NODShiLtJ_G0015810.1 mouse_genomes_project 1 41335885 41341120 + MGP_NODShiLtJ_P0019248 Mrpl30 protein_coding protein_coding MGP_NODShiLtJ_T0019249.1 MGP_NODShiLtJ_G0015810.1 mouse_genomes_project 1 41336887 41341293 + MGP_NODShiLtJ_P0019249 Mrpl30 protein_coding protein_coding MGP_NODShiLtJ_T0019250.1 MGP_NODShiLtJ_G0015810.1 mouse_genomes_project 1 41340210 41341080 + Mrpl30 protein_coding retained_intron MGP_NODShiLtJ_T0000791.1 MGP_NODShiLtJ_G0000722.1 mouse_genomes_project 1 223160828 223163290 - TEC TEC MGP_NODShiLtJ_T0000466.1 MGP_NODShiLtJ_G0000402.1 mouse_genomes_project 1 62741172 62741525 - TEC TEC MGP_NODShiLtJ_T0016903.1 MGP_NODShiLtJ_G0014980.1 mouse_genomes_project 1 151021538 151088765 + Gm29103 processed_transcript processed_transcript MGP_NODShiLtJ_T0011769.1 MGP_NODShiLtJ_G0009877.1 mouse_genomes_project 1 8208837 8209194 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012170.1 MGP_NODShiLtJ_G0010278.1 mouse_genomes_project 1 178132058 178132611 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012185.1 MGP_NODShiLtJ_G0010293.1 mouse_genomes_project 1 185414397 185414862 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012134.1 MGP_NODShiLtJ_G0010242.1 mouse_genomes_project 1 158741071 158741510 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023750.1 MGP_NODShiLtJ_G0016755.1 mouse_genomes_project 1 208433810 208435629 - MGP_NODShiLtJ_P0023750 Ccdc121 protein_coding protein_coding MGP_NODShiLtJ_T0002920.1 MGP_NODShiLtJ_G0002739.1 mouse_genomes_project 1 207580541 207599137 - Gm37768 antisense antisense MGP_NODShiLtJ_T0011964.1 MGP_NODShiLtJ_G0010072.1 mouse_genomes_project 1 73389222 73389996 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098516.1 MGP_NODShiLtJ_G0036910.1 mouse_genomes_project 1 36170838 36170948 + Gm24901 snRNA snRNA MGP_NODShiLtJ_T0000780.1 MGP_NODShiLtJ_G0000711.1 mouse_genomes_project 1 221029212 221031785 + TEC TEC MGP_NODShiLtJ_T0022649.1 MGP_NODShiLtJ_G0016499.1 mouse_genomes_project 1 180791293 180815239 + MGP_NODShiLtJ_P0022649 Angptl1 protein_coding protein_coding MGP_NODShiLtJ_T0022650.1 MGP_NODShiLtJ_G0016499.1 mouse_genomes_project 1 180791678 180798352 + MGP_NODShiLtJ_P0022650 Angptl1 protein_coding protein_coding MGP_NODShiLtJ_T0099798.1 MGP_NODShiLtJ_G0038192.1 mouse_genomes_project 1 153861701 153861827 + Gm25612 snoRNA snoRNA MGP_NODShiLtJ_T0000474.1 MGP_NODShiLtJ_G0000410.1 mouse_genomes_project 1 67632290 67633347 + TEC TEC MGP_NODShiLtJ_T0099811.1 MGP_NODShiLtJ_G0038205.1 mouse_genomes_project 1 185588784 185588846 + Gm22489 snoRNA snoRNA MGP_NODShiLtJ_T0022742.1 MGP_NODShiLtJ_G0016514.1 mouse_genomes_project 1 185427713 185520017 + MGP_NODShiLtJ_P0022742 Rc3h1 protein_coding protein_coding MGP_NODShiLtJ_T0022743.1 MGP_NODShiLtJ_G0016514.1 mouse_genomes_project 1 185458566 185512924 + MGP_NODShiLtJ_P0022743 Rc3h1 protein_coding protein_coding MGP_NODShiLtJ_T0022744.1 MGP_NODShiLtJ_G0016514.1 mouse_genomes_project 1 185492572 185493727 + Rc3h1 protein_coding retained_intron MGP_NODShiLtJ_T0023596.1 MGP_NODShiLtJ_G0016726.1 mouse_genomes_project 1 205592604 206205130 - MGP_NODShiLtJ_P0023596 Smyd3 protein_coding protein_coding MGP_NODShiLtJ_T0023597.1 MGP_NODShiLtJ_G0016726.1 mouse_genomes_project 1 205595690 205919050 - Smyd3 protein_coding processed_transcript MGP_NODShiLtJ_T0023598.1 MGP_NODShiLtJ_G0016726.1 mouse_genomes_project 1 205595795 206050869 - Smyd3 protein_coding processed_transcript MGP_NODShiLtJ_T0023599.1 MGP_NODShiLtJ_G0016726.1 mouse_genomes_project 1 205598762 205631871 - Smyd3 protein_coding processed_transcript MGP_NODShiLtJ_T0023600.1 MGP_NODShiLtJ_G0016726.1 mouse_genomes_project 1 206055015 206083378 - Smyd3 protein_coding processed_transcript MGP_NODShiLtJ_T0023601.1 MGP_NODShiLtJ_G0016726.1 mouse_genomes_project 1 206070931 206205137 - MGP_NODShiLtJ_P0023601 Smyd3 protein_coding protein_coding MGP_NODShiLtJ_T0023602.1 MGP_NODShiLtJ_G0016726.1 mouse_genomes_project 1 206193087 206205101 - MGP_NODShiLtJ_P0023602 Smyd3 protein_coding protein_coding MGP_NODShiLtJ_T0099735.1 MGP_NODShiLtJ_G0038129.1 mouse_genomes_project 1 12641993 12642124 - Gm26273 snoRNA snoRNA MGP_NODShiLtJ_T0005884.1 MGP_NODShiLtJ_G0004929.1 mouse_genomes_project 1 177819009 177905481 - A830008E24Rik lincRNA lincRNA MGP_NODShiLtJ_T0005885.1 MGP_NODShiLtJ_G0004929.1 mouse_genomes_project 1 177829513 177907279 - A830008E24Rik lincRNA lincRNA MGP_NODShiLtJ_T0098547.1 MGP_NODShiLtJ_G0036941.1 mouse_genomes_project 1 109134222 109134329 + Gm26245 snRNA snRNA MGP_NODShiLtJ_T0005817.1 MGP_NODShiLtJ_G0004874.1 mouse_genomes_project 1 137511936 137515610 + Gm28209 lincRNA lincRNA MGP_NODShiLtJ_T0098594.1 MGP_NODShiLtJ_G0036988.1 mouse_genomes_project 1 216145909 216146013 + Gm25269 snRNA snRNA MGP_NODShiLtJ_T0000567.1 MGP_NODShiLtJ_G0000503.1 mouse_genomes_project 1 120234988 120242319 + TEC TEC MGP_NODShiLtJ_T0005598.1 MGP_NODShiLtJ_G0004706.1 mouse_genomes_project 1 18963350 18964391 + Gm28340 lincRNA lincRNA MGP_NODShiLtJ_T0099770.1 MGP_NODShiLtJ_G0038164.1 mouse_genomes_project 1 74951900 74952030 + Gm25832 snoRNA snoRNA MGP_NODShiLtJ_T0000741.1 MGP_NODShiLtJ_G0000674.1 mouse_genomes_project 1 204895677 204897547 + TEC TEC MGP_NODShiLtJ_T0098554.1 MGP_NODShiLtJ_G0036948.1 mouse_genomes_project 1 136169261 136169391 + Gm23497 snRNA snRNA MGP_NODShiLtJ_T0021247.1 MGP_NODShiLtJ_G0016205.1 mouse_genomes_project 1 104690307 104756664 + MGP_NODShiLtJ_P0021247 Crocc2 protein_coding protein_coding MGP_NODShiLtJ_T0011935.1 MGP_NODShiLtJ_G0010043.1 mouse_genomes_project 1 67177315 67179501 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019004.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36802917 36857195 - MGP_NODShiLtJ_P0019004 Zfp451 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019005.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36802917 36857337 - MGP_NODShiLtJ_P0019005 Zfp451 protein_coding protein_coding MGP_NODShiLtJ_T0019006.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36818891 36847107 - MGP_NODShiLtJ_P0019006 Zfp451 protein_coding protein_coding MGP_NODShiLtJ_T0019007.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36820367 36825249 - MGP_NODShiLtJ_P0019007 Zfp451 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019008.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36820500 36857236 - MGP_NODShiLtJ_P0019008 Zfp451 protein_coding protein_coding MGP_NODShiLtJ_T0019009.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36823489 36857021 - Zfp451 protein_coding processed_transcript MGP_NODShiLtJ_T0019010.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36828202 36842469 - Zfp451 protein_coding processed_transcript MGP_NODShiLtJ_T0019011.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36833869 36857380 - MGP_NODShiLtJ_P0019011 Zfp451 protein_coding protein_coding MGP_NODShiLtJ_T0019012.1 MGP_NODShiLtJ_G0015770.1 mouse_genomes_project 1 36856336 36857405 - Zfp451 protein_coding retained_intron MGP_NODShiLtJ_T0000054.1 MGP_NODShiLtJ_G0000043.1 mouse_genomes_project 1 9421468 9422024 + MGP_NODShiLtJ_P0000054 Igkv4-92 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0022513.1 MGP_NODShiLtJ_G0016477.1 mouse_genomes_project 1 178004778 178009281 + MGP_NODShiLtJ_P0022513 Zfp648 protein_coding protein_coding MGP_NODShiLtJ_T0000721.1 MGP_NODShiLtJ_G0000655.1 mouse_genomes_project 1 196827855 196829121 + TEC TEC MGP_NODShiLtJ_T0005797.1 MGP_NODShiLtJ_G0004859.1 mouse_genomes_project 1 119560715 119572957 + Gm29012 lincRNA lincRNA MGP_NODShiLtJ_T0101517.1 MGP_NODShiLtJ_G0039687.1 mouse_genomes_project 1 200473865 200474964 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005944.1 MGP_NODShiLtJ_G0004977.1 mouse_genomes_project 1 207650093 207656590 + Gm17275 lincRNA lincRNA MGP_NODShiLtJ_T0009425.1 MGP_NODShiLtJ_G0007558.1 mouse_genomes_project 1 98942886 98942996 + Gm25198 miRNA miRNA MGP_NODShiLtJ_T0000437.1 MGP_NODShiLtJ_G0000373.1 mouse_genomes_project 1 40267990 40272610 - TEC TEC MGP_NODShiLtJ_T0005593.1 MGP_NODShiLtJ_G0004701.1 mouse_genomes_project 1 11894684 11905788 + Gm29283 lincRNA lincRNA MGP_NODShiLtJ_T0005759.1 MGP_NODShiLtJ_G0004824.1 mouse_genomes_project 1 97976790 97980900 - Gm29374 lincRNA lincRNA MGP_NODShiLtJ_T0011926.1 MGP_NODShiLtJ_G0010034.1 mouse_genomes_project 1 64458714 64459604 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022275.1 MGP_NODShiLtJ_G0016431.1 mouse_genomes_project 1 160348186 160844552 + MGP_NODShiLtJ_P0022275 protein_coding protein_coding MGP_NODShiLtJ_T0022276.1 MGP_NODShiLtJ_G0016431.1 mouse_genomes_project 1 160348198 160844733 + MGP_NODShiLtJ_P0022276 protein_coding protein_coding MGP_NODShiLtJ_T0022277.1 MGP_NODShiLtJ_G0016431.1 mouse_genomes_project 1 160637417 160638433 + protein_coding retained_intron MGP_NODShiLtJ_T0022278.1 MGP_NODShiLtJ_G0016431.1 mouse_genomes_project 1 160637582 160726446 + protein_coding processed_transcript MGP_NODShiLtJ_T0022279.1 MGP_NODShiLtJ_G0016431.1 mouse_genomes_project 1 160719507 160806503 + MGP_NODShiLtJ_P0022279 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020230.1 MGP_NODShiLtJ_G0015998.1 mouse_genomes_project 1 81717159 81834174 - MGP_NODShiLtJ_P0020230 March4 protein_coding protein_coding MGP_NODShiLtJ_T0000601.1 MGP_NODShiLtJ_G0000537.1 mouse_genomes_project 1 146764479 146765794 + TEC TEC MGP_NODShiLtJ_T0005956.1 MGP_NODShiLtJ_G0004985.1 mouse_genomes_project 1 210415093 210415476 + Gm37986 lincRNA lincRNA MGP_NODShiLtJ_T0000412.1 MGP_NODShiLtJ_G0000349.1 mouse_genomes_project 1 26475353 26476369 - TEC TEC MGP_NODShiLtJ_T0022424.1 MGP_NODShiLtJ_G0016458.1 mouse_genomes_project 1 175990418 176093699 + MGP_NODShiLtJ_P0022424 Colgalt2 protein_coding protein_coding MGP_NODShiLtJ_T0022425.1 MGP_NODShiLtJ_G0016458.1 mouse_genomes_project 1 175990418 176092822 + MGP_NODShiLtJ_P0022425 Colgalt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021443.1 MGP_NODShiLtJ_G0016249.1 mouse_genomes_project 1 121685784 121696600 - MGP_NODShiLtJ_P0021443 Serpinb3a protein_coding protein_coding MGP_NODShiLtJ_T0021444.1 MGP_NODShiLtJ_G0016249.1 mouse_genomes_project 1 121685802 121696600 - MGP_NODShiLtJ_P0021444 Serpinb3a protein_coding protein_coding MGP_NODShiLtJ_T0023034.1 MGP_NODShiLtJ_G0016573.1 mouse_genomes_project 1 191290280 191353610 + MGP_NODShiLtJ_P0023034 Ildr2 protein_coding protein_coding MGP_NODShiLtJ_T0023035.1 MGP_NODShiLtJ_G0016573.1 mouse_genomes_project 1 191290334 191348042 + MGP_NODShiLtJ_P0023035 Ildr2 protein_coding protein_coding MGP_NODShiLtJ_T0023036.1 MGP_NODShiLtJ_G0016573.1 mouse_genomes_project 1 191290334 191348042 + MGP_NODShiLtJ_P0023036 Ildr2 protein_coding protein_coding MGP_NODShiLtJ_T0023037.1 MGP_NODShiLtJ_G0016573.1 mouse_genomes_project 1 191290334 191348042 + MGP_NODShiLtJ_P0023037 Ildr2 protein_coding protein_coding MGP_NODShiLtJ_T0023038.1 MGP_NODShiLtJ_G0016573.1 mouse_genomes_project 1 191290334 191348042 + MGP_NODShiLtJ_P0023038 Ildr2 protein_coding protein_coding MGP_NODShiLtJ_T0023039.1 MGP_NODShiLtJ_G0016573.1 mouse_genomes_project 1 191290334 191348042 + MGP_NODShiLtJ_P0023039 Ildr2 protein_coding protein_coding MGP_NODShiLtJ_T0023040.1 MGP_NODShiLtJ_G0016573.1 mouse_genomes_project 1 191290334 191348042 + MGP_NODShiLtJ_P0023040 Ildr2 protein_coding protein_coding MGP_NODShiLtJ_T0012180.1 MGP_NODShiLtJ_G0010288.1 mouse_genomes_project 1 181728044 181728242 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019596.1 MGP_NODShiLtJ_G0015878.1 mouse_genomes_project 1 59153404 59204695 - MGP_NODShiLtJ_P0019596 1700019D03Rik protein_coding protein_coding MGP_NODShiLtJ_T0019597.1 MGP_NODShiLtJ_G0015878.1 mouse_genomes_project 1 59163762 59194757 - MGP_NODShiLtJ_P0019597 1700019D03Rik protein_coding protein_coding MGP_NODShiLtJ_T0019598.1 MGP_NODShiLtJ_G0015878.1 mouse_genomes_project 1 59163762 59194251 - MGP_NODShiLtJ_P0019598 1700019D03Rik protein_coding protein_coding MGP_NODShiLtJ_T0019599.1 MGP_NODShiLtJ_G0015878.1 mouse_genomes_project 1 59167044 59266980 - MGP_NODShiLtJ_P0019599 1700019D03Rik protein_coding protein_coding MGP_NODShiLtJ_T0019600.1 MGP_NODShiLtJ_G0015878.1 mouse_genomes_project 1 59167049 59214884 - MGP_NODShiLtJ_P0019600 1700019D03Rik protein_coding protein_coding MGP_NODShiLtJ_T0019601.1 MGP_NODShiLtJ_G0015878.1 mouse_genomes_project 1 59167059 59236234 - MGP_NODShiLtJ_P0019601 1700019D03Rik protein_coding protein_coding MGP_NODShiLtJ_T0011913.1 MGP_NODShiLtJ_G0010021.1 mouse_genomes_project 1 59101506 59102368 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018719.1 MGP_NODShiLtJ_G0015703.1 mouse_genomes_project 1 8790819 9204427 - MGP_NODShiLtJ_P0018719 Cpa6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018720.1 MGP_NODShiLtJ_G0015703.1 mouse_genomes_project 1 8790826 9204427 - MGP_NODShiLtJ_P0018720 Cpa6 protein_coding protein_coding MGP_NODShiLtJ_T0018721.1 MGP_NODShiLtJ_G0015703.1 mouse_genomes_project 1 8930056 8936919 - Cpa6 protein_coding retained_intron MGP_NODShiLtJ_T0018722.1 MGP_NODShiLtJ_G0015703.1 mouse_genomes_project 1 9064151 9204387 - Cpa6 protein_coding processed_transcript MGP_NODShiLtJ_T0099779.1 MGP_NODShiLtJ_G0038173.1 mouse_genomes_project 1 106995303 106995413 - Gm23181 snoRNA snoRNA MGP_NODShiLtJ_T0020661.1 MGP_NODShiLtJ_G0016073.1 mouse_genomes_project 1 89641273 89646701 + MGP_NODShiLtJ_P0020661 Mrpl44 protein_coding protein_coding MGP_NODShiLtJ_T0020662.1 MGP_NODShiLtJ_G0016073.1 mouse_genomes_project 1 89641371 89643802 + Mrpl44 protein_coding retained_intron MGP_NODShiLtJ_T0011852.1 MGP_NODShiLtJ_G0009960.1 mouse_genomes_project 1 38119884 38120113 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098239.1 MGP_NODShiLtJ_G0036650.1 mouse_genomes_project 1 176331230 176355367 - Gm28792 sense_intronic sense_intronic MGP_NODShiLtJ_T0024077.1 MGP_NODShiLtJ_G0016822.1 mouse_genomes_project 1 219835810 220182617 + MGP_NODShiLtJ_P0024077 Kcnh1 protein_coding protein_coding MGP_NODShiLtJ_T0024078.1 MGP_NODShiLtJ_G0016822.1 mouse_genomes_project 1 219835810 220182617 + MGP_NODShiLtJ_P0024078 Kcnh1 protein_coding protein_coding MGP_NODShiLtJ_T0024079.1 MGP_NODShiLtJ_G0016822.1 mouse_genomes_project 1 220098585 220182617 + MGP_NODShiLtJ_P0024079 Kcnh1 protein_coding protein_coding MGP_NODShiLtJ_T0011856.1 MGP_NODShiLtJ_G0009964.1 mouse_genomes_project 1 39910156 39910501 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022909.1 MGP_NODShiLtJ_G0016546.1 mouse_genomes_project 1 188849604 188852441 + MGP_NODShiLtJ_P0022909 Mettl18 protein_coding protein_coding MGP_NODShiLtJ_T0022910.1 MGP_NODShiLtJ_G0016546.1 mouse_genomes_project 1 188849604 188852441 + MGP_NODShiLtJ_P0022910 Mettl18 protein_coding protein_coding MGP_NODShiLtJ_T0009384.1 MGP_NODShiLtJ_G0007517.1 mouse_genomes_project 1 31388825 31388921 - Gm23785 miRNA miRNA MGP_NODShiLtJ_T0020791.1 MGP_NODShiLtJ_G0016102.1 mouse_genomes_project 1 96191771 96192458 - MGP_NODShiLtJ_P0020791 protein_coding protein_coding MGP_NODShiLtJ_T0005935.1 MGP_NODShiLtJ_G0004969.1 mouse_genomes_project 1 202519787 202523350 + Gm38101 lincRNA lincRNA MGP_NODShiLtJ_T0005879.1 MGP_NODShiLtJ_G0004925.1 mouse_genomes_project 1 177433305 177450633 - C230024C17Rik lincRNA lincRNA MGP_NODShiLtJ_T0023448.1 MGP_NODShiLtJ_G0016677.1 mouse_genomes_project 1 199221580 199253588 - protein_coding retained_intron MGP_NODShiLtJ_T0023450.1 MGP_NODShiLtJ_G0016677.1 mouse_genomes_project 1 199233846 199240463 - MGP_NODShiLtJ_P0023450 protein_coding protein_coding MGP_NODShiLtJ_T0019224.1 MGP_NODShiLtJ_G0015806.1 mouse_genomes_project 1 41042896 41156473 - MGP_NODShiLtJ_P0019224 2010300C02Rik protein_coding protein_coding MGP_NODShiLtJ_T0019225.1 MGP_NODShiLtJ_G0015806.1 mouse_genomes_project 1 41042896 41056402 - MGP_NODShiLtJ_P0019225 2010300C02Rik protein_coding protein_coding MGP_NODShiLtJ_T0019226.1 MGP_NODShiLtJ_G0015806.1 mouse_genomes_project 1 41069815 41156183 - MGP_NODShiLtJ_P0019226 2010300C02Rik protein_coding protein_coding MGP_NODShiLtJ_T0000357.1 MGP_NODShiLtJ_G0000295.1 mouse_genomes_project 1 4615547 4619710 - TEC TEC MGP_NODShiLtJ_T0098550.1 MGP_NODShiLtJ_G0036944.1 mouse_genomes_project 1 120509277 120509384 + Gm26214 snRNA snRNA MGP_NODShiLtJ_T0012224.1 MGP_NODShiLtJ_G0010332.1 mouse_genomes_project 1 205379333 205379807 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005773.1 MGP_NODShiLtJ_G0004837.1 mouse_genomes_project 1 101804098 101805206 - Gm28722 lincRNA lincRNA MGP_NODShiLtJ_T0022600.1 MGP_NODShiLtJ_G0016492.1 mouse_genomes_project 1 180222086 180239153 + MGP_NODShiLtJ_P0022600 Nphs2 protein_coding protein_coding MGP_NODShiLtJ_T0022601.1 MGP_NODShiLtJ_G0016492.1 mouse_genomes_project 1 180222402 180237549 + MGP_NODShiLtJ_P0022601 Nphs2 protein_coding protein_coding MGP_NODShiLtJ_T0005910.1 MGP_NODShiLtJ_G0004948.1 mouse_genomes_project 1 189555307 189563686 + lincRNA lincRNA MGP_NODShiLtJ_T0022283.1 MGP_NODShiLtJ_G0016433.1 mouse_genomes_project 1 164851919 164868233 + MGP_NODShiLtJ_P0022283 B3galt2 protein_coding protein_coding MGP_NODShiLtJ_T0005614.1 MGP_NODShiLtJ_G0004721.1 mouse_genomes_project 1 37408219 37409097 - Gm37958 lincRNA lincRNA MGP_NODShiLtJ_T0005886.1 MGP_NODShiLtJ_G0004930.1 mouse_genomes_project 1 178044714 178057314 - 4930452N14Rik lincRNA lincRNA MGP_NODShiLtJ_T0005986.1 MGP_NODShiLtJ_G0005007.1 mouse_genomes_project 1 217970827 217997284 - Gm30725 lincRNA lincRNA MGP_NODShiLtJ_T0023461.1 MGP_NODShiLtJ_G0016684.1 mouse_genomes_project 1 199752907 199880305 - MGP_NODShiLtJ_P0023461 Mndal protein_coding protein_coding MGP_NODShiLtJ_T0023462.1 MGP_NODShiLtJ_G0016684.1 mouse_genomes_project 1 199752907 199818064 - MGP_NODShiLtJ_P0023462 Mndal protein_coding protein_coding MGP_NODShiLtJ_T0023463.1 MGP_NODShiLtJ_G0016684.1 mouse_genomes_project 1 199752907 199780466 - MGP_NODShiLtJ_P0023463 Mndal protein_coding protein_coding MGP_NODShiLtJ_T0005837.1 MGP_NODShiLtJ_G0004889.1 mouse_genomes_project 1 149150238 149163562 - Gm16081 lincRNA lincRNA MGP_NODShiLtJ_T0019791.1 MGP_NODShiLtJ_G0015917.1 mouse_genomes_project 1 65441812 65461571 + MGP_NODShiLtJ_P0019791 Nif3l1 protein_coding protein_coding MGP_NODShiLtJ_T0019792.1 MGP_NODShiLtJ_G0015917.1 mouse_genomes_project 1 65441928 65481640 + MGP_NODShiLtJ_P0019792 Nif3l1 protein_coding protein_coding MGP_NODShiLtJ_T0019793.1 MGP_NODShiLtJ_G0015917.1 mouse_genomes_project 1 65442289 65447169 + MGP_NODShiLtJ_P0019793 Nif3l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019794.1 MGP_NODShiLtJ_G0015917.1 mouse_genomes_project 1 65442390 65444712 + MGP_NODShiLtJ_P0019794 Nif3l1 protein_coding protein_coding MGP_NODShiLtJ_T0019795.1 MGP_NODShiLtJ_G0015917.1 mouse_genomes_project 1 65444292 65460381 + MGP_NODShiLtJ_P0019795 Nif3l1 protein_coding protein_coding MGP_NODShiLtJ_T0019796.1 MGP_NODShiLtJ_G0015917.1 mouse_genomes_project 1 65445828 65455915 + Nif3l1 protein_coding retained_intron MGP_NODShiLtJ_T0019797.1 MGP_NODShiLtJ_G0015917.1 mouse_genomes_project 1 65451339 65454115 + Nif3l1 protein_coding retained_intron MGP_NODShiLtJ_T0019798.1 MGP_NODShiLtJ_G0015917.1 mouse_genomes_project 1 65455799 65459499 + Nif3l1 protein_coding retained_intron MGP_NODShiLtJ_T0021148.1 MGP_NODShiLtJ_G0016181.1 mouse_genomes_project 1 102976036 102982402 + Asb1 protein_coding processed_transcript MGP_NODShiLtJ_T0021149.1 MGP_NODShiLtJ_G0016181.1 mouse_genomes_project 1 102976201 102990274 + MGP_NODShiLtJ_P0021149 Asb1 protein_coding protein_coding MGP_NODShiLtJ_T0021150.1 MGP_NODShiLtJ_G0016181.1 mouse_genomes_project 1 102976201 102990274 + MGP_NODShiLtJ_P0021150 Asb1 protein_coding protein_coding MGP_NODShiLtJ_T0021151.1 MGP_NODShiLtJ_G0016181.1 mouse_genomes_project 1 102976282 102995109 + MGP_NODShiLtJ_P0021151 Asb1 protein_coding protein_coding MGP_NODShiLtJ_T0021152.1 MGP_NODShiLtJ_G0016181.1 mouse_genomes_project 1 102976549 102988229 + MGP_NODShiLtJ_P0021152 Asb1 protein_coding protein_coding MGP_NODShiLtJ_T0021153.1 MGP_NODShiLtJ_G0016181.1 mouse_genomes_project 1 102976549 102990567 + MGP_NODShiLtJ_P0021153 Asb1 protein_coding protein_coding MGP_NODShiLtJ_T0000630.1 MGP_NODShiLtJ_G0000565.1 mouse_genomes_project 1 156951135 156951544 - TEC TEC MGP_NODShiLtJ_T0020426.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84597844 84600822 + Zfand2b protein_coding retained_intron MGP_NODShiLtJ_T0020427.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84597844 84600826 + MGP_NODShiLtJ_P0020427 Zfand2b protein_coding protein_coding MGP_NODShiLtJ_T0020428.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84597844 84599949 + MGP_NODShiLtJ_P0020428 Zfand2b protein_coding protein_coding MGP_NODShiLtJ_T0020429.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84597853 84600822 + MGP_NODShiLtJ_P0020429 Zfand2b protein_coding protein_coding MGP_NODShiLtJ_T0020430.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84597856 84599089 + Zfand2b protein_coding retained_intron MGP_NODShiLtJ_T0020431.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84597864 84598828 + Zfand2b protein_coding retained_intron MGP_NODShiLtJ_T0020432.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84597899 84599766 + Zfand2b protein_coding retained_intron MGP_NODShiLtJ_T0020433.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84597976 84599884 + Zfand2b protein_coding retained_intron MGP_NODShiLtJ_T0020434.1 MGP_NODShiLtJ_G0016039.1 mouse_genomes_project 1 84598126 84600599 + MGP_NODShiLtJ_P0020434 Zfand2b protein_coding protein_coding MGP_NODShiLtJ_T0000514.1 MGP_NODShiLtJ_G0000450.1 mouse_genomes_project 1 89481604 89483127 - TEC TEC MGP_NODShiLtJ_T0011771.1 MGP_NODShiLtJ_G0009879.1 mouse_genomes_project 1 9172787 9173269 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005948.1 MGP_NODShiLtJ_G0004980.1 mouse_genomes_project 1 208593705 208616480 + lincRNA lincRNA MGP_NODShiLtJ_T0005949.1 MGP_NODShiLtJ_G0004980.1 mouse_genomes_project 1 208593731 208605988 + lincRNA lincRNA MGP_NODShiLtJ_T0011936.1 MGP_NODShiLtJ_G0010044.1 mouse_genomes_project 1 67357944 67363269 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005689.1 MGP_NODShiLtJ_G0004772.1 mouse_genomes_project 1 68789035 68807973 + 9530026F06Rik lincRNA lincRNA MGP_NODShiLtJ_T0020277.1 MGP_NODShiLtJ_G0016010.1 mouse_genomes_project 1 83718608 83719683 + MGP_NODShiLtJ_P0020277 Gpbar1 protein_coding protein_coding MGP_NODShiLtJ_T0023423.1 MGP_NODShiLtJ_G0016667.1 mouse_genomes_project 1 198574778 198576214 + MGP_NODShiLtJ_P0023423 Olfr16 protein_coding protein_coding MGP_NODShiLtJ_T0005905.1 MGP_NODShiLtJ_G0004943.1 mouse_genomes_project 1 188081673 188083504 - Gm26523 lincRNA lincRNA MGP_NODShiLtJ_T0021885.1 MGP_NODShiLtJ_G0016346.1 mouse_genomes_project 1 151645217 151647627 + MGP_NODShiLtJ_P0021885 Tmem81 protein_coding protein_coding MGP_NODShiLtJ_T0021886.1 MGP_NODShiLtJ_G0016346.1 mouse_genomes_project 1 151645876 151647627 + MGP_NODShiLtJ_P0021886 Tmem81 protein_coding protein_coding MGP_NODShiLtJ_T0016921.1 MGP_NODShiLtJ_G0014984.1 mouse_genomes_project 1 155920071 155923675 - 9230116N13Rik processed_transcript antisense MGP_NODShiLtJ_T0016922.1 MGP_NODShiLtJ_G0014984.1 mouse_genomes_project 1 155920998 155923650 - 9230116N13Rik processed_transcript retained_intron MGP_NODShiLtJ_T0019239.1 MGP_NODShiLtJ_G0015809.1 mouse_genomes_project 1 41317768 41333360 - MGP_NODShiLtJ_P0019239 Mitd1 protein_coding protein_coding MGP_NODShiLtJ_T0019240.1 MGP_NODShiLtJ_G0015809.1 mouse_genomes_project 1 41321854 41333364 - MGP_NODShiLtJ_P0019240 Mitd1 protein_coding protein_coding MGP_NODShiLtJ_T0019241.1 MGP_NODShiLtJ_G0015809.1 mouse_genomes_project 1 41321856 41323085 - Mitd1 protein_coding processed_transcript MGP_NODShiLtJ_T0019242.1 MGP_NODShiLtJ_G0015809.1 mouse_genomes_project 1 41321954 41324829 - Mitd1 protein_coding processed_transcript MGP_NODShiLtJ_T0019243.1 MGP_NODShiLtJ_G0015809.1 mouse_genomes_project 1 41324889 41333229 - Mitd1 protein_coding retained_intron MGP_NODShiLtJ_T0012186.1 MGP_NODShiLtJ_G0010294.1 mouse_genomes_project 1 185870802 185871999 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023554.1 MGP_NODShiLtJ_G0016715.1 mouse_genomes_project 1 203114556 203257585 + Sdccag8 protein_coding retained_intron MGP_NODShiLtJ_T0023555.1 MGP_NODShiLtJ_G0016715.1 mouse_genomes_project 1 203114556 203146754 + Sdccag8 protein_coding retained_intron MGP_NODShiLtJ_T0023556.1 MGP_NODShiLtJ_G0016715.1 mouse_genomes_project 1 203114556 203161735 + MGP_NODShiLtJ_P0023556 Sdccag8 protein_coding protein_coding MGP_NODShiLtJ_T0023557.1 MGP_NODShiLtJ_G0016715.1 mouse_genomes_project 1 203114556 203323767 + MGP_NODShiLtJ_P0023557 Sdccag8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023558.1 MGP_NODShiLtJ_G0016715.1 mouse_genomes_project 1 203114556 203323767 + MGP_NODShiLtJ_P0023558 Sdccag8 protein_coding protein_coding MGP_NODShiLtJ_T0023559.1 MGP_NODShiLtJ_G0016715.1 mouse_genomes_project 1 203300838 203323767 + Sdccag8 protein_coding processed_transcript MGP_NODShiLtJ_T0021295.1 MGP_NODShiLtJ_G0016213.1 mouse_genomes_project 1 105056464 105173990 + MGP_NODShiLtJ_P0021295 Farp2 protein_coding protein_coding MGP_NODShiLtJ_T0021296.1 MGP_NODShiLtJ_G0016213.1 mouse_genomes_project 1 105056497 105129543 + MGP_NODShiLtJ_P0021296 Farp2 protein_coding protein_coding MGP_NODShiLtJ_T0021297.1 MGP_NODShiLtJ_G0016213.1 mouse_genomes_project 1 105146558 105173385 + MGP_NODShiLtJ_P0021297 Farp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022324.1 MGP_NODShiLtJ_G0016442.1 mouse_genomes_project 1 168497363 169085511 + MGP_NODShiLtJ_P0022324 Brinp3 protein_coding protein_coding MGP_NODShiLtJ_T0022325.1 MGP_NODShiLtJ_G0016442.1 mouse_genomes_project 1 168500217 168865999 + MGP_NODShiLtJ_P0022325 Brinp3 protein_coding protein_coding MGP_NODShiLtJ_T0022326.1 MGP_NODShiLtJ_G0016442.1 mouse_genomes_project 1 168500290 169085512 + MGP_NODShiLtJ_P0022326 Brinp3 protein_coding protein_coding MGP_NODShiLtJ_T0022327.1 MGP_NODShiLtJ_G0016442.1 mouse_genomes_project 1 168500307 169085506 + MGP_NODShiLtJ_P0022327 Brinp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022328.1 MGP_NODShiLtJ_G0016442.1 mouse_genomes_project 1 168500341 168532434 + Brinp3 protein_coding retained_intron MGP_NODShiLtJ_T0009427.1 MGP_NODShiLtJ_G0007560.1 mouse_genomes_project 1 104351715 104351781 + Mir149 miRNA miRNA MGP_NODShiLtJ_T0022997.1 MGP_NODShiLtJ_G0016567.1 mouse_genomes_project 1 190784809 190796213 + MGP_NODShiLtJ_P0022997 Creg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022998.1 MGP_NODShiLtJ_G0016567.1 mouse_genomes_project 1 190784809 190796213 + MGP_NODShiLtJ_P0022998 Creg1 protein_coding protein_coding MGP_NODShiLtJ_T0022999.1 MGP_NODShiLtJ_G0016567.1 mouse_genomes_project 1 190790412 190794825 + MGP_NODShiLtJ_P0022999 Creg1 protein_coding protein_coding MGP_NODShiLtJ_T0002841.1 MGP_NODShiLtJ_G0002677.1 mouse_genomes_project 1 152237703 152255991 - Gm28609 antisense antisense MGP_NODShiLtJ_T0000700.1 MGP_NODShiLtJ_G0000634.1 mouse_genomes_project 1 185437446 185438313 + TEC TEC MGP_NODShiLtJ_T0018892.1 MGP_NODShiLtJ_G0015744.1 mouse_genomes_project 1 21322981 21326300 + MGP_NODShiLtJ_P0018892 protein_coding protein_coding MGP_NODShiLtJ_T0098241.1 MGP_NODShiLtJ_G0036652.1 mouse_genomes_project 1 177463477 177465447 + sense_intronic sense_intronic MGP_NODShiLtJ_T0020859.1 MGP_NODShiLtJ_G0016116.1 mouse_genomes_project 1 97032696 97048108 - MGP_NODShiLtJ_P0020859 Ncl protein_coding protein_coding MGP_NODShiLtJ_T0020860.1 MGP_NODShiLtJ_G0016116.1 mouse_genomes_project 1 97038473 97048072 - Ncl protein_coding retained_intron MGP_NODShiLtJ_T0020861.1 MGP_NODShiLtJ_G0016116.1 mouse_genomes_project 1 97038474 97039190 - Ncl protein_coding retained_intron MGP_NODShiLtJ_T0020862.1 MGP_NODShiLtJ_G0016116.1 mouse_genomes_project 1 97038542 97040042 - Ncl protein_coding retained_intron MGP_NODShiLtJ_T0020863.1 MGP_NODShiLtJ_G0016116.1 mouse_genomes_project 1 97039079 97040285 - Ncl protein_coding retained_intron MGP_NODShiLtJ_T0020864.1 MGP_NODShiLtJ_G0016116.1 mouse_genomes_project 1 97045290 97047677 - MGP_NODShiLtJ_P0020864 Ncl protein_coding protein_coding MGP_NODShiLtJ_T0019726.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734126 64847256 + MGP_NODShiLtJ_P0019726 Spats2l protein_coding protein_coding MGP_NODShiLtJ_T0019727.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734213 64841208 + Spats2l protein_coding retained_intron MGP_NODShiLtJ_T0019728.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734265 64864733 + MGP_NODShiLtJ_P0019728 Spats2l protein_coding protein_coding MGP_NODShiLtJ_T0019729.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734383 64760386 + Spats2l protein_coding retained_intron MGP_NODShiLtJ_T0019730.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734564 64847324 + MGP_NODShiLtJ_P0019730 Spats2l protein_coding protein_coding MGP_NODShiLtJ_T0019731.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734708 64901441 + MGP_NODShiLtJ_P0019731 Spats2l protein_coding protein_coding MGP_NODShiLtJ_T0019732.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734854 64818121 + Spats2l protein_coding retained_intron MGP_NODShiLtJ_T0019733.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734876 64793063 + Spats2l protein_coding retained_intron MGP_NODShiLtJ_T0019734.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64734881 64759528 + Spats2l protein_coding retained_intron MGP_NODShiLtJ_T0019735.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64757619 64909943 + MGP_NODShiLtJ_P0019735 Spats2l protein_coding protein_coding MGP_NODShiLtJ_T0019736.1 MGP_NODShiLtJ_G0015907.1 mouse_genomes_project 1 64864694 64903794 + Spats2l protein_coding retained_intron MGP_NODShiLtJ_T0000505.1 MGP_NODShiLtJ_G0000441.1 mouse_genomes_project 1 82551945 82554456 - TEC TEC MGP_NODShiLtJ_T0021412.1 MGP_NODShiLtJ_G0016240.1 mouse_genomes_project 1 120331998 120397593 + MGP_NODShiLtJ_P0021412 Tnfrsf11a protein_coding protein_coding MGP_NODShiLtJ_T0021413.1 MGP_NODShiLtJ_G0016240.1 mouse_genomes_project 1 120332030 120365990 + Tnfrsf11a protein_coding retained_intron MGP_NODShiLtJ_T0021414.1 MGP_NODShiLtJ_G0016240.1 mouse_genomes_project 1 120371442 120377437 + Tnfrsf11a protein_coding retained_intron MGP_NODShiLtJ_T0101522.1 MGP_NODShiLtJ_G0039692.1 mouse_genomes_project 1 208356198 208356876 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002853.1 MGP_NODShiLtJ_G0002685.1 mouse_genomes_project 1 155606763 155610009 - Gm37759 antisense antisense MGP_NODShiLtJ_T0019650.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61306511 61309785 - Ankrd44 protein_coding retained_intron MGP_NODShiLtJ_T0019651.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61306511 61601167 - MGP_NODShiLtJ_P0019651 Ankrd44 protein_coding protein_coding MGP_NODShiLtJ_T0019652.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61306513 61601167 - MGP_NODShiLtJ_P0019652 Ankrd44 protein_coding protein_coding MGP_NODShiLtJ_T0019653.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61310268 61318712 - MGP_NODShiLtJ_P0019653 Ankrd44 protein_coding protein_coding MGP_NODShiLtJ_T0019654.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61312840 61431147 - MGP_NODShiLtJ_P0019654 Ankrd44 protein_coding protein_coding MGP_NODShiLtJ_T0019655.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61316072 61355579 - Ankrd44 protein_coding retained_intron MGP_NODShiLtJ_T0019656.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61328218 61387395 - Ankrd44 protein_coding retained_intron MGP_NODShiLtJ_T0019657.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61386886 61388693 - Ankrd44 protein_coding retained_intron MGP_NODShiLtJ_T0019658.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61392284 61399033 - Ankrd44 protein_coding retained_intron MGP_NODShiLtJ_T0019659.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61398690 61601134 - Ankrd44 protein_coding retained_intron MGP_NODShiLtJ_T0019660.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61406379 61433842 - Ankrd44 protein_coding retained_intron MGP_NODShiLtJ_T0019661.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61425667 61436224 - Ankrd44 protein_coding processed_transcript MGP_NODShiLtJ_T0019662.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61425985 61601167 - Ankrd44 protein_coding retained_intron MGP_NODShiLtJ_T0019663.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61428831 61491134 - Ankrd44 protein_coding processed_transcript MGP_NODShiLtJ_T0019664.1 MGP_NODShiLtJ_G0015892.1 mouse_genomes_project 1 61434210 61565069 - MGP_NODShiLtJ_P0019664 Ankrd44 protein_coding protein_coding MGP_NODShiLtJ_T0011772.1 MGP_NODShiLtJ_G0009880.1 mouse_genomes_project 1 9363495 9364254 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009424.1 MGP_NODShiLtJ_G0007557.1 mouse_genomes_project 1 97359076 97359133 - Gm22955 miRNA miRNA MGP_NODShiLtJ_T0019315.1 MGP_NODShiLtJ_G0015824.1 mouse_genomes_project 1 43079657 43091574 + MGP_NODShiLtJ_P0019315 Cnot11 protein_coding protein_coding MGP_NODShiLtJ_T0019316.1 MGP_NODShiLtJ_G0015824.1 mouse_genomes_project 1 43080467 43091558 + MGP_NODShiLtJ_P0019316 Cnot11 protein_coding protein_coding MGP_NODShiLtJ_T0019317.1 MGP_NODShiLtJ_G0015824.1 mouse_genomes_project 1 43082911 43091136 + Cnot11 protein_coding retained_intron MGP_NODShiLtJ_T0019318.1 MGP_NODShiLtJ_G0015824.1 mouse_genomes_project 1 43084700 43090054 + MGP_NODShiLtJ_P0019318 Cnot11 protein_coding protein_coding MGP_NODShiLtJ_T0023590.1 MGP_NODShiLtJ_G0016724.1 mouse_genomes_project 1 204985497 205021918 + Efcab2 protein_coding processed_transcript MGP_NODShiLtJ_T0023591.1 MGP_NODShiLtJ_G0016724.1 mouse_genomes_project 1 204985515 205101017 + MGP_NODShiLtJ_P0023591 Efcab2 protein_coding protein_coding MGP_NODShiLtJ_T0023592.1 MGP_NODShiLtJ_G0016724.1 mouse_genomes_project 1 205034540 205097974 + Efcab2 protein_coding processed_transcript MGP_NODShiLtJ_T0000720.1 MGP_NODShiLtJ_G0000654.1 mouse_genomes_project 1 193846629 193847238 - TEC TEC MGP_NODShiLtJ_T0000500.1 MGP_NODShiLtJ_G0000436.1 mouse_genomes_project 1 77381812 77385054 - TEC TEC MGP_NODShiLtJ_T0011146.1 MGP_NODShiLtJ_G0009279.1 mouse_genomes_project 1 161751416 161751530 + Gm22016 misc_RNA misc_RNA MGP_NODShiLtJ_T0000457.1 MGP_NODShiLtJ_G0000393.1 mouse_genomes_project 1 52535383 52536289 + TEC TEC MGP_NODShiLtJ_T0000450.1 MGP_NODShiLtJ_G0000386.1 mouse_genomes_project 1 46573609 46574285 + TEC TEC MGP_NODShiLtJ_T0002952.1 MGP_NODShiLtJ_G0002762.1 mouse_genomes_project 1 219663180 219668584 - Gm26670 antisense antisense MGP_NODShiLtJ_T0023198.1 MGP_NODShiLtJ_G0016617.1 mouse_genomes_project 1 196693670 196698318 - MGP_NODShiLtJ_P0023198 Fcer1g protein_coding protein_coding MGP_NODShiLtJ_T0023199.1 MGP_NODShiLtJ_G0016617.1 mouse_genomes_project 1 196693678 196698260 - MGP_NODShiLtJ_P0023199 Fcer1g protein_coding protein_coding MGP_NODShiLtJ_T0023200.1 MGP_NODShiLtJ_G0016617.1 mouse_genomes_project 1 196695143 196698292 - Fcer1g protein_coding retained_intron MGP_NODShiLtJ_T0023664.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207027550 207030592 - Psen2 protein_coding processed_transcript MGP_NODShiLtJ_T0023665.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207027550 207055637 - MGP_NODShiLtJ_P0023665 Psen2 protein_coding protein_coding MGP_NODShiLtJ_T0023666.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207027550 207052475 - MGP_NODShiLtJ_P0023666 Psen2 protein_coding protein_coding MGP_NODShiLtJ_T0023667.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207027552 207030095 - Psen2 protein_coding retained_intron MGP_NODShiLtJ_T0023668.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207027552 207045287 - MGP_NODShiLtJ_P0023668 Psen2 protein_coding protein_coding MGP_NODShiLtJ_T0023669.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207027935 207030589 - Psen2 protein_coding processed_transcript MGP_NODShiLtJ_T0023670.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207027989 207047487 - MGP_NODShiLtJ_P0023670 Psen2 protein_coding protein_coding MGP_NODShiLtJ_T0023671.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207027991 207045094 - MGP_NODShiLtJ_P0023671 Psen2 protein_coding protein_coding MGP_NODShiLtJ_T0023672.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207028013 207030552 - Psen2 protein_coding processed_transcript MGP_NODShiLtJ_T0023673.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207033050 207055581 - Psen2 protein_coding retained_intron MGP_NODShiLtJ_T0023674.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207035700 207041444 - Psen2 protein_coding retained_intron MGP_NODShiLtJ_T0023675.1 MGP_NODShiLtJ_G0016736.1 mouse_genomes_project 1 207044974 207062783 - MGP_NODShiLtJ_P0023675 Psen2 protein_coding protein_coding MGP_NODShiLtJ_T0005735.1 MGP_NODShiLtJ_G0004805.1 mouse_genomes_project 1 86027114 86040573 + Gm17751 lincRNA lincRNA MGP_NODShiLtJ_T0005736.1 MGP_NODShiLtJ_G0004805.1 mouse_genomes_project 1 86027114 86039989 + Gm17751 lincRNA lincRNA MGP_NODShiLtJ_T0012086.1 MGP_NODShiLtJ_G0010194.1 mouse_genomes_project 1 136300789 136301108 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021903.1 MGP_NODShiLtJ_G0016349.1 mouse_genomes_project 1 152058395 152118096 + MGP_NODShiLtJ_P0021903 Lrrn2 protein_coding protein_coding MGP_NODShiLtJ_T0021904.1 MGP_NODShiLtJ_G0016349.1 mouse_genomes_project 1 152058477 152115241 + Lrrn2 protein_coding processed_transcript MGP_NODShiLtJ_T0021096.1 MGP_NODShiLtJ_G0016171.1 mouse_genomes_project 1 102604182 102631131 + MGP_NODShiLtJ_P0021096 Ramp1 protein_coding protein_coding MGP_NODShiLtJ_T0021097.1 MGP_NODShiLtJ_G0016171.1 mouse_genomes_project 1 102604402 102631131 + MGP_NODShiLtJ_P0021097 Ramp1 protein_coding protein_coding MGP_NODShiLtJ_T0021098.1 MGP_NODShiLtJ_G0016171.1 mouse_genomes_project 1 102604406 102649460 + MGP_NODShiLtJ_P0021098 Ramp1 protein_coding protein_coding MGP_NODShiLtJ_T0098591.1 MGP_NODShiLtJ_G0036985.1 mouse_genomes_project 1 207684081 207684189 + Gm24836 snRNA snRNA MGP_NODShiLtJ_T0012195.1 MGP_NODShiLtJ_G0010303.1 mouse_genomes_project 1 190621790 190622622 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018673.1 MGP_NODShiLtJ_G0015699.1 mouse_genomes_project 1 8395582 8414969 - MGP_NODShiLtJ_P0018673 Ppp1r42 protein_coding protein_coding MGP_NODShiLtJ_T0018674.1 MGP_NODShiLtJ_G0015699.1 mouse_genomes_project 1 8395582 8434905 - MGP_NODShiLtJ_P0018674 Ppp1r42 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018675.1 MGP_NODShiLtJ_G0015699.1 mouse_genomes_project 1 8395778 8440549 - MGP_NODShiLtJ_P0018675 Ppp1r42 protein_coding protein_coding MGP_NODShiLtJ_T0018676.1 MGP_NODShiLtJ_G0015699.1 mouse_genomes_project 1 8395783 8440546 - MGP_NODShiLtJ_P0018676 Ppp1r42 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018677.1 MGP_NODShiLtJ_G0015699.1 mouse_genomes_project 1 8425385 8440546 - Ppp1r42 protein_coding retained_intron MGP_NODShiLtJ_T0019169.1 MGP_NODShiLtJ_G0015798.1 mouse_genomes_project 1 40083948 40110796 + MGP_NODShiLtJ_P0019169 Zap70 protein_coding protein_coding MGP_NODShiLtJ_T0019170.1 MGP_NODShiLtJ_G0015798.1 mouse_genomes_project 1 40089083 40093178 + MGP_NODShiLtJ_P0019170 Zap70 protein_coding protein_coding MGP_NODShiLtJ_T0019171.1 MGP_NODShiLtJ_G0015798.1 mouse_genomes_project 1 40093102 40094486 + Zap70 protein_coding retained_intron MGP_NODShiLtJ_T0019172.1 MGP_NODShiLtJ_G0015798.1 mouse_genomes_project 1 40101148 40110793 + Zap70 protein_coding retained_intron MGP_NODShiLtJ_T0005932.1 MGP_NODShiLtJ_G0004966.1 mouse_genomes_project 1 196792670 196798233 - Gm20045 lincRNA lincRNA MGP_NODShiLtJ_T0022788.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185806134 185817242 - MGP_NODShiLtJ_P0022788 Prdx6 protein_coding protein_coding MGP_NODShiLtJ_T0022789.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185807037 185817209 - MGP_NODShiLtJ_P0022789 Prdx6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022790.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185807586 185817192 - Prdx6 protein_coding processed_transcript MGP_NODShiLtJ_T0022791.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185807620 185817189 - MGP_NODShiLtJ_P0022791 Prdx6 protein_coding protein_coding MGP_NODShiLtJ_T0022792.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185807657 185817144 - Prdx6 protein_coding processed_transcript MGP_NODShiLtJ_T0022793.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185807830 185816577 - Prdx6 protein_coding processed_transcript MGP_NODShiLtJ_T0022794.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185809633 185817189 - Prdx6 protein_coding processed_transcript MGP_NODShiLtJ_T0022795.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185814627 185817185 - Prdx6 protein_coding retained_intron MGP_NODShiLtJ_T0022796.1 MGP_NODShiLtJ_G0016521.1 mouse_genomes_project 1 185815585 185817185 - Prdx6 protein_coding retained_intron MGP_NODShiLtJ_T0022575.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179920399 179957562 - MGP_NODShiLtJ_P0022575 Tor1aip1 protein_coding protein_coding MGP_NODShiLtJ_T0022576.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179921792 179959160 - MGP_NODShiLtJ_P0022576 Tor1aip1 protein_coding protein_coding MGP_NODShiLtJ_T0022577.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179924655 179959213 - MGP_NODShiLtJ_P0022577 Tor1aip1 protein_coding protein_coding MGP_NODShiLtJ_T0022578.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179925405 179955697 - MGP_NODShiLtJ_P0022578 Tor1aip1 protein_coding protein_coding MGP_NODShiLtJ_T0022579.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179925446 179959213 - MGP_NODShiLtJ_P0022579 Tor1aip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022580.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179925446 179957625 - MGP_NODShiLtJ_P0022580 Tor1aip1 protein_coding protein_coding MGP_NODShiLtJ_T0022581.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179936614 179937895 - Tor1aip1 protein_coding retained_intron MGP_NODShiLtJ_T0022582.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179937499 179958968 - MGP_NODShiLtJ_P0022582 Tor1aip1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022583.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179943271 179958783 - MGP_NODShiLtJ_P0022583 Tor1aip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022584.1 MGP_NODShiLtJ_G0016488.1 mouse_genomes_project 1 179952893 179958880 - Tor1aip1 protein_coding retained_intron MGP_NODShiLtJ_T0019536.1 MGP_NODShiLtJ_G0015870.1 mouse_genomes_project 1 58117356 58249472 + MGP_NODShiLtJ_P0019536 Stat4 protein_coding protein_coding MGP_NODShiLtJ_T0019537.1 MGP_NODShiLtJ_G0015870.1 mouse_genomes_project 1 58139315 58249467 + MGP_NODShiLtJ_P0019537 Stat4 protein_coding protein_coding MGP_NODShiLtJ_T0019538.1 MGP_NODShiLtJ_G0015870.1 mouse_genomes_project 1 58139698 58210251 + Stat4 protein_coding retained_intron MGP_NODShiLtJ_T0019539.1 MGP_NODShiLtJ_G0015870.1 mouse_genomes_project 1 58247731 58249471 + Stat4 protein_coding retained_intron MGP_NODShiLtJ_T0002877.1 MGP_NODShiLtJ_G0002705.1 mouse_genomes_project 1 184633805 184830138 + Gm36975 antisense antisense MGP_NODShiLtJ_T0021647.1 MGP_NODShiLtJ_G0016293.1 mouse_genomes_project 1 146321148 146363779 + MGP_NODShiLtJ_P0021647 Acmsd protein_coding protein_coding MGP_NODShiLtJ_T0021648.1 MGP_NODShiLtJ_G0016293.1 mouse_genomes_project 1 146352620 146363779 + Acmsd protein_coding processed_transcript MGP_NODShiLtJ_T0012006.1 MGP_NODShiLtJ_G0010114.1 mouse_genomes_project 1 93591621 93592462 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002861.1 MGP_NODShiLtJ_G0002692.1 mouse_genomes_project 1 173698729 173724858 - 2310030A07Rik antisense antisense MGP_NODShiLtJ_T0000564.1 MGP_NODShiLtJ_G0000500.1 mouse_genomes_project 1 117825786 117828342 + TEC TEC MGP_NODShiLtJ_T0023754.1 MGP_NODShiLtJ_G0016757.1 mouse_genomes_project 1 208762564 208792642 - MGP_NODShiLtJ_P0023754 Lbr protein_coding protein_coding MGP_NODShiLtJ_T0023755.1 MGP_NODShiLtJ_G0016757.1 mouse_genomes_project 1 208762585 208767733 - Lbr protein_coding retained_intron MGP_NODShiLtJ_T0023756.1 MGP_NODShiLtJ_G0016757.1 mouse_genomes_project 1 208767070 208776732 - MGP_NODShiLtJ_P0023756 Lbr protein_coding protein_coding MGP_NODShiLtJ_T0023757.1 MGP_NODShiLtJ_G0016757.1 mouse_genomes_project 1 208768743 208777000 - Lbr protein_coding retained_intron MGP_NODShiLtJ_T0023758.1 MGP_NODShiLtJ_G0016757.1 mouse_genomes_project 1 208785681 208793310 - MGP_NODShiLtJ_P0023758 Lbr protein_coding protein_coding MGP_NODShiLtJ_T0023759.1 MGP_NODShiLtJ_G0016757.1 mouse_genomes_project 1 208785710 208792624 - MGP_NODShiLtJ_P0023759 Lbr protein_coding protein_coding MGP_NODShiLtJ_T0023760.1 MGP_NODShiLtJ_G0016757.1 mouse_genomes_project 1 208785861 208793123 - MGP_NODShiLtJ_P0023760 Lbr protein_coding protein_coding MGP_NODShiLtJ_T0023761.1 MGP_NODShiLtJ_G0016757.1 mouse_genomes_project 1 208788726 208792589 - MGP_NODShiLtJ_P0023761 Lbr protein_coding protein_coding MGP_NODShiLtJ_T0011855.1 MGP_NODShiLtJ_G0009963.1 mouse_genomes_project 1 39217228 39218132 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012174.1 MGP_NODShiLtJ_G0010282.1 mouse_genomes_project 1 179763737 179763996 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000534.1 MGP_NODShiLtJ_G0000470.1 mouse_genomes_project 1 96790832 96793511 + TEC TEC MGP_NODShiLtJ_T0000749.1 MGP_NODShiLtJ_G0000682.1 mouse_genomes_project 1 208626137 208629950 - TEC TEC MGP_NODShiLtJ_T0101008.1 MGP_NODShiLtJ_G0039397.1 mouse_genomes_project 1 88734454 88734603 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0098243.1 MGP_NODShiLtJ_G0036654.1 mouse_genomes_project 1 185209388 185210028 - Gm37328 sense_intronic sense_intronic MGP_NODShiLtJ_T0000608.1 MGP_NODShiLtJ_G0000544.1 mouse_genomes_project 1 149404506 149406766 + TEC TEC MGP_NODShiLtJ_T0000730.1 MGP_NODShiLtJ_G0000664.1 mouse_genomes_project 1 202621926 202626171 - TEC TEC MGP_NODShiLtJ_T0011142.1 MGP_NODShiLtJ_G0009275.1 mouse_genomes_project 1 110779116 110779428 + Gm25413 misc_RNA misc_RNA MGP_NODShiLtJ_T0023809.1 MGP_NODShiLtJ_G0016768.1 mouse_genomes_project 1 209971232 209993116 + MGP_NODShiLtJ_P0023809 Tlr5 protein_coding protein_coding MGP_NODShiLtJ_T0023810.1 MGP_NODShiLtJ_G0016768.1 mouse_genomes_project 1 209971232 209993463 + MGP_NODShiLtJ_P0023810 Tlr5 protein_coding protein_coding MGP_NODShiLtJ_T0023811.1 MGP_NODShiLtJ_G0016768.1 mouse_genomes_project 1 209971266 209987117 + Tlr5 protein_coding processed_transcript MGP_NODShiLtJ_T0023812.1 MGP_NODShiLtJ_G0016768.1 mouse_genomes_project 1 209971272 209986881 + Tlr5 protein_coding processed_transcript MGP_NODShiLtJ_T0023813.1 MGP_NODShiLtJ_G0016768.1 mouse_genomes_project 1 209989600 209993418 + MGP_NODShiLtJ_P0023813 Tlr5 protein_coding protein_coding MGP_NODShiLtJ_T0019875.1 MGP_NODShiLtJ_G0015932.1 mouse_genomes_project 1 66672187 66796532 + MGP_NODShiLtJ_P0019875 Gm973 protein_coding protein_coding MGP_NODShiLtJ_T0019876.1 MGP_NODShiLtJ_G0015932.1 mouse_genomes_project 1 66681027 66683712 + MGP_NODShiLtJ_P0019876 Gm973 protein_coding protein_coding MGP_NODShiLtJ_T0019877.1 MGP_NODShiLtJ_G0015932.1 mouse_genomes_project 1 66681391 66757406 + MGP_NODShiLtJ_P0019877 Gm973 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019878.1 MGP_NODShiLtJ_G0015932.1 mouse_genomes_project 1 66703099 66715370 + Gm973 protein_coding retained_intron MGP_NODShiLtJ_T0019879.1 MGP_NODShiLtJ_G0015932.1 mouse_genomes_project 1 66707697 66722025 + Gm973 protein_coding processed_transcript MGP_NODShiLtJ_T0019880.1 MGP_NODShiLtJ_G0015932.1 mouse_genomes_project 1 66717170 66725864 + Gm973 protein_coding retained_intron MGP_NODShiLtJ_T0019882.1 MGP_NODShiLtJ_G0015932.1 mouse_genomes_project 1 66779383 66789341 + Gm973 protein_coding processed_transcript MGP_NODShiLtJ_T0019883.1 MGP_NODShiLtJ_G0015932.1 mouse_genomes_project 1 66791420 66798440 + MGP_NODShiLtJ_P0019883 Gm973 protein_coding protein_coding MGP_NODShiLtJ_T0021167.1 MGP_NODShiLtJ_G0016184.1 mouse_genomes_project 1 103917855 103952660 - MGP_NODShiLtJ_P0021167 Ndufa10 protein_coding protein_coding MGP_NODShiLtJ_T0021168.1 MGP_NODShiLtJ_G0016184.1 mouse_genomes_project 1 103918124 103952557 - MGP_NODShiLtJ_P0021168 Ndufa10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021169.1 MGP_NODShiLtJ_G0016184.1 mouse_genomes_project 1 103918687 103939563 - Ndufa10 protein_coding retained_intron MGP_NODShiLtJ_T0021170.1 MGP_NODShiLtJ_G0016184.1 mouse_genomes_project 1 103930898 103941835 - Ndufa10 protein_coding processed_transcript MGP_NODShiLtJ_T0021171.1 MGP_NODShiLtJ_G0016184.1 mouse_genomes_project 1 103941067 103949708 - Ndufa10 protein_coding retained_intron MGP_NODShiLtJ_T0021172.1 MGP_NODShiLtJ_G0016184.1 mouse_genomes_project 1 103941948 103949897 - Ndufa10 protein_coding retained_intron MGP_NODShiLtJ_T0021173.1 MGP_NODShiLtJ_G0016184.1 mouse_genomes_project 1 103946260 103952547 - MGP_NODShiLtJ_P0021173 Ndufa10 protein_coding protein_coding MGP_NODShiLtJ_T0021174.1 MGP_NODShiLtJ_G0016184.1 mouse_genomes_project 1 103951578 103952567 - Ndufa10 protein_coding retained_intron MGP_NODShiLtJ_T0011750.1 MGP_NODShiLtJ_G0009858.1 mouse_genomes_project 1 4797751 4797910 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011941.1 MGP_NODShiLtJ_G0010049.1 mouse_genomes_project 1 68121041 68122384 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098246.1 MGP_NODShiLtJ_G0036657.1 mouse_genomes_project 1 210421260 210423823 + Gm37214 sense_intronic sense_intronic MGP_NODShiLtJ_T0021936.1 MGP_NODShiLtJ_G0016356.1 mouse_genomes_project 1 152518793 152541225 + MGP_NODShiLtJ_P0021936 protein_coding protein_coding MGP_NODShiLtJ_T0021937.1 MGP_NODShiLtJ_G0016356.1 mouse_genomes_project 1 152518793 152541432 + MGP_NODShiLtJ_P0021937 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021939.1 MGP_NODShiLtJ_G0016356.1 mouse_genomes_project 1 152532121 152541432 + MGP_NODShiLtJ_P0021939 protein_coding protein_coding MGP_NODShiLtJ_T0021941.1 MGP_NODShiLtJ_G0016356.1 mouse_genomes_project 1 152538739 152541253 + MGP_NODShiLtJ_P0021941 protein_coding protein_coding MGP_NODShiLtJ_T0019209.1 MGP_NODShiLtJ_G0015803.1 mouse_genomes_project 1 40835449 40849192 - MGP_NODShiLtJ_P0019209 Coa5 protein_coding protein_coding MGP_NODShiLtJ_T0019210.1 MGP_NODShiLtJ_G0015803.1 mouse_genomes_project 1 40847599 40849089 - Coa5 protein_coding retained_intron MGP_NODShiLtJ_T0019130.1 MGP_NODShiLtJ_G0015791.1 mouse_genomes_project 1 39813918 39831441 + MGP_NODShiLtJ_P0019130 Cnnm3 protein_coding protein_coding MGP_NODShiLtJ_T0019131.1 MGP_NODShiLtJ_G0015791.1 mouse_genomes_project 1 39813918 39831441 + MGP_NODShiLtJ_P0019131 Cnnm3 protein_coding protein_coding MGP_NODShiLtJ_T0019132.1 MGP_NODShiLtJ_G0015791.1 mouse_genomes_project 1 39815148 39823639 + Cnnm3 protein_coding retained_intron MGP_NODShiLtJ_T0019133.1 MGP_NODShiLtJ_G0015791.1 mouse_genomes_project 1 39821772 39822778 + Cnnm3 protein_coding retained_intron MGP_NODShiLtJ_T0019134.1 MGP_NODShiLtJ_G0015791.1 mouse_genomes_project 1 39823964 39828804 + Cnnm3 protein_coding retained_intron MGP_NODShiLtJ_T0005844.1 MGP_NODShiLtJ_G0004896.1 mouse_genomes_project 1 152871839 152875836 + Gm26706 lincRNA lincRNA MGP_NODShiLtJ_T0005747.1 MGP_NODShiLtJ_G0004814.1 mouse_genomes_project 1 90125334 90130325 + 2310015K22Rik lincRNA lincRNA MGP_NODShiLtJ_T0099739.1 MGP_NODShiLtJ_G0038133.1 mouse_genomes_project 1 16758758 16758869 + Gm25166 snoRNA snoRNA MGP_NODShiLtJ_T0020788.1 MGP_NODShiLtJ_G0016099.1 mouse_genomes_project 1 95686769 95689849 + MGP_NODShiLtJ_P0020788 Gm10553 protein_coding protein_coding MGP_NODShiLtJ_T0012037.1 MGP_NODShiLtJ_G0010145.1 mouse_genomes_project 1 113996693 113997246 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098532.1 MGP_NODShiLtJ_G0036926.1 mouse_genomes_project 1 74940746 74940806 + Gm27934 snRNA snRNA MGP_NODShiLtJ_T0000581.1 MGP_NODShiLtJ_G0000517.1 mouse_genomes_project 1 140811551 140823951 + TEC TEC MGP_NODShiLtJ_T0020932.1 MGP_NODShiLtJ_G0016134.1 mouse_genomes_project 1 98248176 98256546 - MGP_NODShiLtJ_P0020932 Kcnj13 protein_coding protein_coding MGP_NODShiLtJ_T0020933.1 MGP_NODShiLtJ_G0016134.1 mouse_genomes_project 1 98248815 98251203 - MGP_NODShiLtJ_P0020933 Kcnj13 protein_coding protein_coding MGP_NODShiLtJ_T0011920.1 MGP_NODShiLtJ_G0010028.1 mouse_genomes_project 1 61875558 61875865 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023032.1 MGP_NODShiLtJ_G0016572.1 mouse_genomes_project 1 191233068 191274122 - MGP_NODShiLtJ_P0023032 Mael protein_coding protein_coding MGP_NODShiLtJ_T0023033.1 MGP_NODShiLtJ_G0016572.1 mouse_genomes_project 1 191233252 191274119 - MGP_NODShiLtJ_P0023033 Mael protein_coding protein_coding MGP_NODShiLtJ_T0000378.1 MGP_NODShiLtJ_G0000316.1 mouse_genomes_project 1 12503539 12504758 - TEC TEC MGP_NODShiLtJ_T0019382.1 MGP_NODShiLtJ_G0015840.1 mouse_genomes_project 1 46622639 46630617 + MGP_NODShiLtJ_P0019382 Pou3f3 protein_coding protein_coding MGP_NODShiLtJ_T0011873.1 MGP_NODShiLtJ_G0009981.1 mouse_genomes_project 1 48420572 48421561 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020516.1 MGP_NODShiLtJ_G0016049.1 mouse_genomes_project 1 84703627 84709817 - MGP_NODShiLtJ_P0020516 Resp18 protein_coding protein_coding MGP_NODShiLtJ_T0020517.1 MGP_NODShiLtJ_G0016049.1 mouse_genomes_project 1 84703629 84705692 - Resp18 protein_coding retained_intron MGP_NODShiLtJ_T0020518.1 MGP_NODShiLtJ_G0016049.1 mouse_genomes_project 1 84703739 84709718 - MGP_NODShiLtJ_P0020518 Resp18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020519.1 MGP_NODShiLtJ_G0016049.1 mouse_genomes_project 1 84705498 84709686 - Resp18 protein_coding retained_intron MGP_NODShiLtJ_T0011802.1 MGP_NODShiLtJ_G0009910.1 mouse_genomes_project 1 21346898 21347094 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022081.1 MGP_NODShiLtJ_G0016391.1 mouse_genomes_project 1 154687630 154692625 - MGP_NODShiLtJ_P0022081 Elf3 protein_coding protein_coding MGP_NODShiLtJ_T0022082.1 MGP_NODShiLtJ_G0016391.1 mouse_genomes_project 1 154687634 154692495 - MGP_NODShiLtJ_P0022082 Elf3 protein_coding protein_coding MGP_NODShiLtJ_T0022083.1 MGP_NODShiLtJ_G0016391.1 mouse_genomes_project 1 154690724 154691717 - Elf3 protein_coding retained_intron MGP_NODShiLtJ_T0000697.1 MGP_NODShiLtJ_G0000631.1 mouse_genomes_project 1 185211080 185211507 - TEC TEC MGP_NODShiLtJ_T0000441.1 MGP_NODShiLtJ_G0000377.1 mouse_genomes_project 1 41095325 41097239 + TEC TEC MGP_NODShiLtJ_T0002753.1 MGP_NODShiLtJ_G0002611.1 mouse_genomes_project 1 48862904 48868818 - 4930521E06Rik antisense antisense MGP_NODShiLtJ_T0000381.1 MGP_NODShiLtJ_G0000319.1 mouse_genomes_project 1 13173845 13174284 - TEC TEC MGP_NODShiLtJ_T0005971.1 MGP_NODShiLtJ_G0004994.1 mouse_genomes_project 1 211818180 211821245 + Gm34342 lincRNA lincRNA MGP_NODShiLtJ_T0012089.1 MGP_NODShiLtJ_G0010197.1 mouse_genomes_project 1 137028769 137029162 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011932.1 MGP_NODShiLtJ_G0010040.1 mouse_genomes_project 1 65882663 65883114 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098217.1 MGP_NODShiLtJ_G0036629.1 mouse_genomes_project 1 840379 851765 - Gm19938 sense_intronic sense_intronic MGP_NODShiLtJ_T0000644.1 MGP_NODShiLtJ_G0000578.1 mouse_genomes_project 1 158786410 158788819 - TEC TEC MGP_NODShiLtJ_T0005600.1 MGP_NODShiLtJ_G0004708.1 mouse_genomes_project 1 20717546 20721291 + Gm28065 lincRNA lincRNA MGP_NODShiLtJ_T0012030.1 MGP_NODShiLtJ_G0010138.1 mouse_genomes_project 1 109192126 109192877 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023840.1 MGP_NODShiLtJ_G0016773.1 mouse_genomes_project 1 210387484 210409856 + MGP_NODShiLtJ_P0023840 Taf1a protein_coding protein_coding MGP_NODShiLtJ_T0023841.1 MGP_NODShiLtJ_G0016773.1 mouse_genomes_project 1 210387488 210407516 + MGP_NODShiLtJ_P0023841 Taf1a protein_coding protein_coding MGP_NODShiLtJ_T0023842.1 MGP_NODShiLtJ_G0016773.1 mouse_genomes_project 1 210387528 210409856 + MGP_NODShiLtJ_P0023842 Taf1a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023843.1 MGP_NODShiLtJ_G0016773.1 mouse_genomes_project 1 210409111 210410714 + MGP_NODShiLtJ_P0023843 Taf1a protein_coding protein_coding MGP_NODShiLtJ_T0098589.1 MGP_NODShiLtJ_G0036983.1 mouse_genomes_project 1 204966655 204966761 + Gm24919 snRNA snRNA MGP_NODShiLtJ_T0021428.1 MGP_NODShiLtJ_G0016245.1 mouse_genomes_project 1 121362959 121396874 - MGP_NODShiLtJ_P0021428 Vps4b protein_coding protein_coding MGP_NODShiLtJ_T0021429.1 MGP_NODShiLtJ_G0016245.1 mouse_genomes_project 1 121368318 121396935 - MGP_NODShiLtJ_P0021429 Vps4b protein_coding protein_coding MGP_NODShiLtJ_T0021430.1 MGP_NODShiLtJ_G0016245.1 mouse_genomes_project 1 121376783 121382280 - Vps4b protein_coding retained_intron MGP_NODShiLtJ_T0021431.1 MGP_NODShiLtJ_G0016245.1 mouse_genomes_project 1 121378926 121380110 - Vps4b protein_coding retained_intron MGP_NODShiLtJ_T0021432.1 MGP_NODShiLtJ_G0016245.1 mouse_genomes_project 1 121385289 121389435 - Vps4b protein_coding processed_transcript MGP_NODShiLtJ_T0021433.1 MGP_NODShiLtJ_G0016245.1 mouse_genomes_project 1 121391238 121396784 - Vps4b protein_coding retained_intron MGP_NODShiLtJ_T0002852.1 MGP_NODShiLtJ_G0002684.1 mouse_genomes_project 1 155045082 155060260 + Gm4793 antisense antisense MGP_NODShiLtJ_T0023201.1 MGP_NODShiLtJ_G0016618.1 mouse_genomes_project 1 196698805 196699497 - Ndufs2 protein_coding retained_intron MGP_NODShiLtJ_T0023202.1 MGP_NODShiLtJ_G0016618.1 mouse_genomes_project 1 196698805 196712441 - Ndufs2 protein_coding retained_intron MGP_NODShiLtJ_T0023203.1 MGP_NODShiLtJ_G0016618.1 mouse_genomes_project 1 196698805 196701483 - Ndufs2 protein_coding processed_transcript MGP_NODShiLtJ_T0023204.1 MGP_NODShiLtJ_G0016618.1 mouse_genomes_project 1 196698805 196712441 - MGP_NODShiLtJ_P0023204 Ndufs2 protein_coding protein_coding MGP_NODShiLtJ_T0023205.1 MGP_NODShiLtJ_G0016618.1 mouse_genomes_project 1 196698805 196712441 - MGP_NODShiLtJ_P0023205 Ndufs2 protein_coding protein_coding MGP_NODShiLtJ_T0023206.1 MGP_NODShiLtJ_G0016618.1 mouse_genomes_project 1 196701099 196703999 - Ndufs2 protein_coding processed_transcript MGP_NODShiLtJ_T0023207.1 MGP_NODShiLtJ_G0016618.1 mouse_genomes_project 1 196702474 196717783 - MGP_NODShiLtJ_P0023207 Ndufs2 protein_coding protein_coding MGP_NODShiLtJ_T0023208.1 MGP_NODShiLtJ_G0016618.1 mouse_genomes_project 1 196702692 196717920 - MGP_NODShiLtJ_P0023208 Ndufs2 protein_coding protein_coding MGP_NODShiLtJ_T0012254.1 MGP_NODShiLtJ_G0010362.1 mouse_genomes_project 1 220578385 220578976 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005742.1 MGP_NODShiLtJ_G0004811.1 mouse_genomes_project 1 88550249 89039079 - lincRNA lincRNA MGP_NODShiLtJ_T0005829.1 MGP_NODShiLtJ_G0004882.1 mouse_genomes_project 1 138922215 138925478 + Gm29359 lincRNA lincRNA MGP_NODShiLtJ_T0019263.1 MGP_NODShiLtJ_G0015814.1 mouse_genomes_project 1 41455518 41513888 + MGP_NODShiLtJ_P0019263 Eif5b protein_coding protein_coding MGP_NODShiLtJ_T0019264.1 MGP_NODShiLtJ_G0015814.1 mouse_genomes_project 1 41455637 41510330 + Eif5b protein_coding retained_intron MGP_NODShiLtJ_T0019265.1 MGP_NODShiLtJ_G0015814.1 mouse_genomes_project 1 41500138 41503772 + Eif5b protein_coding retained_intron MGP_NODShiLtJ_T0019266.1 MGP_NODShiLtJ_G0015814.1 mouse_genomes_project 1 41501173 41505008 + Eif5b protein_coding processed_transcript MGP_NODShiLtJ_T0019267.1 MGP_NODShiLtJ_G0015814.1 mouse_genomes_project 1 41502965 41507135 + Eif5b protein_coding retained_intron MGP_NODShiLtJ_T0011845.1 MGP_NODShiLtJ_G0009953.1 mouse_genomes_project 1 37745039 37745462 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000472.1 MGP_NODShiLtJ_G0000408.1 mouse_genomes_project 1 67104197 67110036 - TEC TEC MGP_NODShiLtJ_T0005615.1 MGP_NODShiLtJ_G0004722.1 mouse_genomes_project 1 37511549 37517792 - Gm37233 lincRNA lincRNA MGP_NODShiLtJ_T0098564.1 MGP_NODShiLtJ_G0036958.1 mouse_genomes_project 1 154804980 154805086 - Gm22796 snRNA snRNA MGP_NODShiLtJ_T0005709.1 MGP_NODShiLtJ_G0004789.1 mouse_genomes_project 1 78317784 78321218 - Gm29113 lincRNA lincRNA MGP_NODShiLtJ_T0005937.1 MGP_NODShiLtJ_G0004971.1 mouse_genomes_project 1 203828532 203838090 + Gm37306 lincRNA lincRNA MGP_NODShiLtJ_T0023342.1 MGP_NODShiLtJ_G0016647.1 mouse_genomes_project 1 197685552 197695032 + MGP_NODShiLtJ_P0023342 Pex19 protein_coding protein_coding MGP_NODShiLtJ_T0023343.1 MGP_NODShiLtJ_G0016647.1 mouse_genomes_project 1 197685553 197689795 + Pex19 protein_coding retained_intron MGP_NODShiLtJ_T0023344.1 MGP_NODShiLtJ_G0016647.1 mouse_genomes_project 1 197685559 197696222 + MGP_NODShiLtJ_P0023344 Pex19 protein_coding protein_coding MGP_NODShiLtJ_T0023345.1 MGP_NODShiLtJ_G0016647.1 mouse_genomes_project 1 197685570 197688961 + Pex19 protein_coding retained_intron MGP_NODShiLtJ_T0023346.1 MGP_NODShiLtJ_G0016647.1 mouse_genomes_project 1 197685570 197687688 + Pex19 protein_coding retained_intron MGP_NODShiLtJ_T0023347.1 MGP_NODShiLtJ_G0016647.1 mouse_genomes_project 1 197693707 197694449 + Pex19 protein_coding retained_intron MGP_NODShiLtJ_T0002856.1 MGP_NODShiLtJ_G0002688.1 mouse_genomes_project 1 158308577 158343402 + Gm28501 antisense antisense MGP_NODShiLtJ_T0020435.1 MGP_NODShiLtJ_G0016040.1 mouse_genomes_project 1 84600913 84609586 - MGP_NODShiLtJ_P0020435 Abcb6 protein_coding protein_coding MGP_NODShiLtJ_T0020436.1 MGP_NODShiLtJ_G0016040.1 mouse_genomes_project 1 84600915 84609480 - Abcb6 protein_coding retained_intron MGP_NODShiLtJ_T0020437.1 MGP_NODShiLtJ_G0016040.1 mouse_genomes_project 1 84600954 84602066 - MGP_NODShiLtJ_P0020437 Abcb6 protein_coding protein_coding MGP_NODShiLtJ_T0020438.1 MGP_NODShiLtJ_G0016040.1 mouse_genomes_project 1 84601916 84609480 - Abcb6 protein_coding retained_intron MGP_NODShiLtJ_T0020439.1 MGP_NODShiLtJ_G0016040.1 mouse_genomes_project 1 84604746 84608143 - Abcb6 protein_coding retained_intron MGP_NODShiLtJ_T0020440.1 MGP_NODShiLtJ_G0016040.1 mouse_genomes_project 1 84607103 84609570 - Abcb6 protein_coding retained_intron MGP_NODShiLtJ_T0002914.1 MGP_NODShiLtJ_G0002734.1 mouse_genomes_project 1 203785319 203786066 - Gm26801 antisense antisense MGP_NODShiLtJ_T0002915.1 MGP_NODShiLtJ_G0002734.1 mouse_genomes_project 1 203786028 203803457 - Gm26801 antisense antisense MGP_NODShiLtJ_T0023266.1 MGP_NODShiLtJ_G0016628.1 mouse_genomes_project 1 196846025 196864972 + MGP_NODShiLtJ_P0023266 Nectin4 protein_coding protein_coding MGP_NODShiLtJ_T0023267.1 MGP_NODShiLtJ_G0016628.1 mouse_genomes_project 1 196846278 196865283 + MGP_NODShiLtJ_P0023267 Nectin4 protein_coding protein_coding MGP_NODShiLtJ_T0023268.1 MGP_NODShiLtJ_G0016628.1 mouse_genomes_project 1 196846281 196864970 + MGP_NODShiLtJ_P0023268 Nectin4 protein_coding protein_coding MGP_NODShiLtJ_T0019696.1 MGP_NODShiLtJ_G0015900.1 mouse_genomes_project 1 61972794 62030990 - MGP_NODShiLtJ_P0019696 Boll protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019697.1 MGP_NODShiLtJ_G0015900.1 mouse_genomes_project 1 61995236 62100366 - MGP_NODShiLtJ_P0019697 Boll protein_coding protein_coding MGP_NODShiLtJ_T0019698.1 MGP_NODShiLtJ_G0015900.1 mouse_genomes_project 1 62030880 62102944 - MGP_NODShiLtJ_P0019698 Boll protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019699.1 MGP_NODShiLtJ_G0015900.1 mouse_genomes_project 1 62030880 62102351 - MGP_NODShiLtJ_P0019699 Boll protein_coding protein_coding MGP_NODShiLtJ_T0019700.1 MGP_NODShiLtJ_G0015900.1 mouse_genomes_project 1 62030880 62102944 - MGP_NODShiLtJ_P0019700 Boll protein_coding protein_coding MGP_NODShiLtJ_T0019701.1 MGP_NODShiLtJ_G0015900.1 mouse_genomes_project 1 62082006 62103094 - MGP_NODShiLtJ_P0019701 Boll protein_coding protein_coding MGP_NODShiLtJ_T0019702.1 MGP_NODShiLtJ_G0015900.1 mouse_genomes_project 1 62082115 62102944 - MGP_NODShiLtJ_P0019702 Boll protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019703.1 MGP_NODShiLtJ_G0015900.1 mouse_genomes_project 1 62087005 62100366 - Boll protein_coding processed_transcript MGP_NODShiLtJ_T0002724.1 MGP_NODShiLtJ_G0002588.1 mouse_genomes_project 1 33624816 33638956 + Gm29128 antisense antisense MGP_NODShiLtJ_T0021042.1 MGP_NODShiLtJ_G0016160.1 mouse_genomes_project 1 101250218 101253430 - MGP_NODShiLtJ_P0021042 Gbx2 protein_coding protein_coding MGP_NODShiLtJ_T0021043.1 MGP_NODShiLtJ_G0016160.1 mouse_genomes_project 1 101250228 101251448 - Gbx2 protein_coding retained_intron MGP_NODShiLtJ_T0005931.1 MGP_NODShiLtJ_G0004965.1 mouse_genomes_project 1 196377871 196383936 + Gm10522 lincRNA lincRNA MGP_NODShiLtJ_T0002933.1 MGP_NODShiLtJ_G0002750.1 mouse_genomes_project 1 214634600 214668607 - Gm38155 antisense antisense MGP_NODShiLtJ_T0002888.1 MGP_NODShiLtJ_G0002712.1 mouse_genomes_project 1 187709715 187826036 + Gm37273 antisense antisense MGP_NODShiLtJ_T0021722.1 MGP_NODShiLtJ_G0016308.1 mouse_genomes_project 1 149569116 149606299 - MGP_NODShiLtJ_P0021722 C4bp protein_coding protein_coding MGP_NODShiLtJ_T0021723.1 MGP_NODShiLtJ_G0016308.1 mouse_genomes_project 1 149573173 149584689 - MGP_NODShiLtJ_P0021723 C4bp protein_coding protein_coding MGP_NODShiLtJ_T0021724.1 MGP_NODShiLtJ_G0016308.1 mouse_genomes_project 1 149579363 149606277 - MGP_NODShiLtJ_P0021724 C4bp protein_coding protein_coding MGP_NODShiLtJ_T0021725.1 MGP_NODShiLtJ_G0016308.1 mouse_genomes_project 1 149602421 149606291 - C4bp protein_coding retained_intron MGP_NODShiLtJ_T0005634.1 MGP_NODShiLtJ_G0004737.1 mouse_genomes_project 1 45277172 45290304 - lincRNA lincRNA MGP_NODShiLtJ_T0021447.1 MGP_NODShiLtJ_G0016251.1 mouse_genomes_project 1 121969780 121978090 - MGP_NODShiLtJ_P0021447 Serpinb3c protein_coding protein_coding MGP_NODShiLtJ_T0023326.1 MGP_NODShiLtJ_G0016645.1 mouse_genomes_project 1 197620857 197640000 - MGP_NODShiLtJ_P0023326 Ncstn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023327.1 MGP_NODShiLtJ_G0016645.1 mouse_genomes_project 1 197620857 197640000 - MGP_NODShiLtJ_P0023327 Ncstn protein_coding protein_coding MGP_NODShiLtJ_T0023328.1 MGP_NODShiLtJ_G0016645.1 mouse_genomes_project 1 197620857 197640000 - MGP_NODShiLtJ_P0023328 Ncstn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023329.1 MGP_NODShiLtJ_G0016645.1 mouse_genomes_project 1 197621545 197622910 - Ncstn protein_coding retained_intron MGP_NODShiLtJ_T0023330.1 MGP_NODShiLtJ_G0016645.1 mouse_genomes_project 1 197622715 197626111 - Ncstn protein_coding retained_intron MGP_NODShiLtJ_T0023331.1 MGP_NODShiLtJ_G0016645.1 mouse_genomes_project 1 197637942 197640000 - Ncstn protein_coding retained_intron MGP_NODShiLtJ_T0002754.1 MGP_NODShiLtJ_G0002612.1 mouse_genomes_project 1 57226845 57229719 - Gm28319 antisense antisense MGP_NODShiLtJ_T0000549.1 MGP_NODShiLtJ_G0000485.1 mouse_genomes_project 1 101144829 101146862 + TEC TEC MGP_NODShiLtJ_T0011833.1 MGP_NODShiLtJ_G0009941.1 mouse_genomes_project 1 36073498 36074249 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005862.1 MGP_NODShiLtJ_G0004911.1 mouse_genomes_project 1 157631564 157693300 - Gm26936 lincRNA lincRNA MGP_NODShiLtJ_T0005863.1 MGP_NODShiLtJ_G0004911.1 mouse_genomes_project 1 157683071 157693275 - Gm26936 lincRNA lincRNA MGP_NODShiLtJ_T0023133.1 MGP_NODShiLtJ_G0016602.1 mouse_genomes_project 1 196080285 196263085 - MGP_NODShiLtJ_P0023133 Atf6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023134.1 MGP_NODShiLtJ_G0016602.1 mouse_genomes_project 1 196177966 196180060 - Atf6 protein_coding retained_intron MGP_NODShiLtJ_T0011779.1 MGP_NODShiLtJ_G0009887.1 mouse_genomes_project 1 12252068 12252709 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019630.1 MGP_NODShiLtJ_G0015887.1 mouse_genomes_project 1 60325914 60361693 - MGP_NODShiLtJ_P0019630 Stk17b protein_coding protein_coding MGP_NODShiLtJ_T0019631.1 MGP_NODShiLtJ_G0015887.1 mouse_genomes_project 1 60333003 60335124 - Stk17b protein_coding retained_intron MGP_NODShiLtJ_T0019632.1 MGP_NODShiLtJ_G0015887.1 mouse_genomes_project 1 60333579 60361626 - MGP_NODShiLtJ_P0019632 Stk17b protein_coding protein_coding MGP_NODShiLtJ_T0011744.1 MGP_NODShiLtJ_G0009852.1 mouse_genomes_project 1 3689217 3690300 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021943.1 MGP_NODShiLtJ_G0016358.1 mouse_genomes_project 1 152614423 152632310 + MGP_NODShiLtJ_P0021943 Etnk2 protein_coding protein_coding MGP_NODShiLtJ_T0021944.1 MGP_NODShiLtJ_G0016358.1 mouse_genomes_project 1 152614427 152627097 + Etnk2 protein_coding retained_intron MGP_NODShiLtJ_T0021945.1 MGP_NODShiLtJ_G0016358.1 mouse_genomes_project 1 152616173 152632290 + MGP_NODShiLtJ_P0021945 Etnk2 protein_coding protein_coding MGP_NODShiLtJ_T0021946.1 MGP_NODShiLtJ_G0016358.1 mouse_genomes_project 1 152616605 152621174 + Etnk2 protein_coding retained_intron MGP_NODShiLtJ_T0021947.1 MGP_NODShiLtJ_G0016358.1 mouse_genomes_project 1 152619332 152628954 + Etnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0023404.1 MGP_NODShiLtJ_G0016660.1 mouse_genomes_project 1 198097538 198101148 + Cfap45 protein_coding retained_intron MGP_NODShiLtJ_T0023405.1 MGP_NODShiLtJ_G0016660.1 mouse_genomes_project 1 198097781 198122676 + MGP_NODShiLtJ_P0023405 Cfap45 protein_coding protein_coding MGP_NODShiLtJ_T0023406.1 MGP_NODShiLtJ_G0016660.1 mouse_genomes_project 1 198097873 198109594 + Cfap45 protein_coding retained_intron MGP_NODShiLtJ_T0023407.1 MGP_NODShiLtJ_G0016660.1 mouse_genomes_project 1 198097876 198109488 + MGP_NODShiLtJ_P0023407 Cfap45 protein_coding protein_coding MGP_NODShiLtJ_T0023408.1 MGP_NODShiLtJ_G0016660.1 mouse_genomes_project 1 198097918 198109465 + MGP_NODShiLtJ_P0023408 Cfap45 protein_coding protein_coding MGP_NODShiLtJ_T0023409.1 MGP_NODShiLtJ_G0016660.1 mouse_genomes_project 1 198102967 198109548 + MGP_NODShiLtJ_P0023409 Cfap45 protein_coding protein_coding MGP_NODShiLtJ_T0023410.1 MGP_NODShiLtJ_G0016660.1 mouse_genomes_project 1 198103328 198109548 + MGP_NODShiLtJ_P0023410 Cfap45 protein_coding protein_coding MGP_NODShiLtJ_T0023411.1 MGP_NODShiLtJ_G0016660.1 mouse_genomes_project 1 198114479 198117452 + MGP_NODShiLtJ_P0023411 Cfap45 protein_coding protein_coding MGP_NODShiLtJ_T0011994.1 MGP_NODShiLtJ_G0010102.1 mouse_genomes_project 1 89984030 89984294 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000752.1 MGP_NODShiLtJ_G0000685.1 mouse_genomes_project 1 208953992 208957867 - TEC TEC MGP_NODShiLtJ_T0019235.1 MGP_NODShiLtJ_G0015808.1 mouse_genomes_project 1 41314705 41318311 + MGP_NODShiLtJ_P0019235 Lipt1 protein_coding protein_coding MGP_NODShiLtJ_T0019236.1 MGP_NODShiLtJ_G0015808.1 mouse_genomes_project 1 41315173 41319196 + MGP_NODShiLtJ_P0019236 Lipt1 protein_coding protein_coding MGP_NODShiLtJ_T0019237.1 MGP_NODShiLtJ_G0015808.1 mouse_genomes_project 1 41315341 41318428 + MGP_NODShiLtJ_P0019237 Lipt1 protein_coding protein_coding MGP_NODShiLtJ_T0019238.1 MGP_NODShiLtJ_G0015808.1 mouse_genomes_project 1 41315529 41318522 + MGP_NODShiLtJ_P0019238 Lipt1 protein_coding protein_coding MGP_NODShiLtJ_T0022335.1 MGP_NODShiLtJ_G0016444.1 mouse_genomes_project 1 173453467 173462398 + MGP_NODShiLtJ_P0022335 Ptgs2 protein_coding protein_coding MGP_NODShiLtJ_T0022336.1 MGP_NODShiLtJ_G0016444.1 mouse_genomes_project 1 173453768 173454763 + MGP_NODShiLtJ_P0022336 Ptgs2 protein_coding protein_coding MGP_NODShiLtJ_T0012135.1 MGP_NODShiLtJ_G0010243.1 mouse_genomes_project 1 158810121 158810755 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011745.1 MGP_NODShiLtJ_G0009853.1 mouse_genomes_project 1 4095985 4096611 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099732.1 MGP_NODShiLtJ_G0038126.1 mouse_genomes_project 1 8362774 8362861 - Snord87 snoRNA snoRNA MGP_NODShiLtJ_T0011797.1 MGP_NODShiLtJ_G0009905.1 mouse_genomes_project 1 19080745 19082989 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002897.1 MGP_NODShiLtJ_G0002720.1 mouse_genomes_project 1 192301800 192315323 + Gm37982 antisense antisense MGP_NODShiLtJ_T0022568.1 MGP_NODShiLtJ_G0016487.1 mouse_genomes_project 1 179753199 179883704 - MGP_NODShiLtJ_P0022568 Cep350 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022569.1 MGP_NODShiLtJ_G0016487.1 mouse_genomes_project 1 179753205 179883847 - MGP_NODShiLtJ_P0022569 Cep350 protein_coding protein_coding MGP_NODShiLtJ_T0022570.1 MGP_NODShiLtJ_G0016487.1 mouse_genomes_project 1 179756782 179769663 - Cep350 protein_coding processed_transcript MGP_NODShiLtJ_T0022571.1 MGP_NODShiLtJ_G0016487.1 mouse_genomes_project 1 179771617 179795589 - Cep350 protein_coding processed_transcript MGP_NODShiLtJ_T0022572.1 MGP_NODShiLtJ_G0016487.1 mouse_genomes_project 1 179777013 179794380 - Cep350 protein_coding processed_transcript MGP_NODShiLtJ_T0022573.1 MGP_NODShiLtJ_G0016487.1 mouse_genomes_project 1 179844736 179883482 - MGP_NODShiLtJ_P0022573 Cep350 protein_coding protein_coding MGP_NODShiLtJ_T0022574.1 MGP_NODShiLtJ_G0016487.1 mouse_genomes_project 1 179877336 179883776 - Cep350 protein_coding retained_intron MGP_NODShiLtJ_T0002729.1 MGP_NODShiLtJ_G0002592.1 mouse_genomes_project 1 39375431 39376494 - Gm37335 antisense antisense MGP_NODShiLtJ_T0020814.1 MGP_NODShiLtJ_G0016107.1 mouse_genomes_project 1 96586718 96589990 + MGP_NODShiLtJ_P0020814 4933407L21Rik protein_coding protein_coding MGP_NODShiLtJ_T0020815.1 MGP_NODShiLtJ_G0016107.1 mouse_genomes_project 1 96586962 96600301 + MGP_NODShiLtJ_P0020815 4933407L21Rik protein_coding protein_coding MGP_NODShiLtJ_T0020816.1 MGP_NODShiLtJ_G0016107.1 mouse_genomes_project 1 96587121 96589990 + 4933407L21Rik protein_coding retained_intron MGP_NODShiLtJ_T0005861.1 MGP_NODShiLtJ_G0004910.1 mouse_genomes_project 1 157619797 157624492 - Gm26979 lincRNA lincRNA MGP_NODShiLtJ_T0023493.1 MGP_NODShiLtJ_G0016704.1 mouse_genomes_project 1 200967662 201063765 - MGP_NODShiLtJ_P0023493 Grem2 protein_coding protein_coding MGP_NODShiLtJ_T0098227.1 MGP_NODShiLtJ_G0036639.1 mouse_genomes_project 1 83735553 83737856 + Gm29358 sense_intronic sense_intronic MGP_NODShiLtJ_T0098228.1 MGP_NODShiLtJ_G0036639.1 mouse_genomes_project 1 83735591 83738818 + Gm29358 sense_intronic sense_intronic MGP_NODShiLtJ_T0019508.1 MGP_NODShiLtJ_G0015866.1 mouse_genomes_project 1 56945966 56960183 + Tmeff2 protein_coding processed_transcript MGP_NODShiLtJ_T0019509.1 MGP_NODShiLtJ_G0015866.1 mouse_genomes_project 1 56945966 56962405 + Tmeff2 protein_coding processed_transcript MGP_NODShiLtJ_T0019510.1 MGP_NODShiLtJ_G0015866.1 mouse_genomes_project 1 56956236 57037719 + MGP_NODShiLtJ_P0019510 Tmeff2 protein_coding protein_coding MGP_NODShiLtJ_T0019511.1 MGP_NODShiLtJ_G0015866.1 mouse_genomes_project 1 56977809 57277032 + MGP_NODShiLtJ_P0019511 Tmeff2 protein_coding protein_coding MGP_NODShiLtJ_T0019296.1 MGP_NODShiLtJ_G0015819.1 mouse_genomes_project 1 42446443 42457547 + MGP_NODShiLtJ_P0019296 Nms protein_coding protein_coding MGP_NODShiLtJ_T0019297.1 MGP_NODShiLtJ_G0015819.1 mouse_genomes_project 1 42446497 42455914 + MGP_NODShiLtJ_P0019297 Nms protein_coding protein_coding MGP_NODShiLtJ_T0018790.1 MGP_NODShiLtJ_G0015718.1 mouse_genomes_project 1 14915045 14946899 - MGP_NODShiLtJ_P0018790 Sbspon protein_coding protein_coding MGP_NODShiLtJ_T0011890.1 MGP_NODShiLtJ_G0009998.1 mouse_genomes_project 1 52379611 52380942 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005674.1 MGP_NODShiLtJ_G0004760.1 mouse_genomes_project 1 62819858 62821084 + 1700003I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0005675.1 MGP_NODShiLtJ_G0004760.1 mouse_genomes_project 1 62819903 62821018 + 1700003I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0019887.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66867956 66875933 + Nop58 protein_coding processed_transcript MGP_NODShiLtJ_T0019888.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66867962 66897839 + MGP_NODShiLtJ_P0019888 Nop58 protein_coding protein_coding MGP_NODShiLtJ_T0019889.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66867970 66881365 + MGP_NODShiLtJ_P0019889 Nop58 protein_coding protein_coding MGP_NODShiLtJ_T0019890.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66867988 66875955 + Nop58 protein_coding retained_intron MGP_NODShiLtJ_T0019891.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66867991 66874181 + Nop58 protein_coding retained_intron MGP_NODShiLtJ_T0019892.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66867994 66906409 + MGP_NODShiLtJ_P0019892 Nop58 protein_coding protein_coding MGP_NODShiLtJ_T0019893.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66868006 66881340 + MGP_NODShiLtJ_P0019893 Nop58 protein_coding protein_coding MGP_NODShiLtJ_T0019894.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66868039 66883729 + MGP_NODShiLtJ_P0019894 Nop58 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019895.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66873370 66883693 + Nop58 protein_coding retained_intron MGP_NODShiLtJ_T0019896.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66875635 66889560 + Nop58 protein_coding retained_intron MGP_NODShiLtJ_T0019897.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66881314 66889512 + MGP_NODShiLtJ_P0019897 Nop58 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019898.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66883722 66893349 + MGP_NODShiLtJ_P0019898 Nop58 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019899.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66889509 66895428 + MGP_NODShiLtJ_P0019899 Nop58 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019900.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66889548 66897608 + MGP_NODShiLtJ_P0019900 Nop58 protein_coding protein_coding MGP_NODShiLtJ_T0019901.1 MGP_NODShiLtJ_G0015934.1 mouse_genomes_project 1 66890059 66897609 + MGP_NODShiLtJ_P0019901 Nop58 protein_coding protein_coding MGP_NODShiLtJ_T0019969.1 MGP_NODShiLtJ_G0015946.1 mouse_genomes_project 1 68353642 68372334 + MGP_NODShiLtJ_P0019969 Icos protein_coding protein_coding MGP_NODShiLtJ_T0019970.1 MGP_NODShiLtJ_G0015946.1 mouse_genomes_project 1 68353642 68376837 + MGP_NODShiLtJ_P0019970 Icos protein_coding protein_coding MGP_NODShiLtJ_T0019120.1 MGP_NODShiLtJ_G0015789.1 mouse_genomes_project 1 39720283 39741122 - MGP_NODShiLtJ_P0019120 Lman2l protein_coding protein_coding MGP_NODShiLtJ_T0019121.1 MGP_NODShiLtJ_G0015789.1 mouse_genomes_project 1 39722477 39746725 - MGP_NODShiLtJ_P0019121 Lman2l protein_coding protein_coding MGP_NODShiLtJ_T0019122.1 MGP_NODShiLtJ_G0015789.1 mouse_genomes_project 1 39723598 39743326 - Lman2l protein_coding retained_intron MGP_NODShiLtJ_T0019123.1 MGP_NODShiLtJ_G0015789.1 mouse_genomes_project 1 39723598 39746725 - MGP_NODShiLtJ_P0019123 Lman2l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019124.1 MGP_NODShiLtJ_G0015789.1 mouse_genomes_project 1 39723598 39746725 - MGP_NODShiLtJ_P0019124 Lman2l protein_coding protein_coding MGP_NODShiLtJ_T0019125.1 MGP_NODShiLtJ_G0015789.1 mouse_genomes_project 1 39724918 39728779 - MGP_NODShiLtJ_P0019125 Lman2l protein_coding protein_coding MGP_NODShiLtJ_T0019126.1 MGP_NODShiLtJ_G0015789.1 mouse_genomes_project 1 39728804 39746725 - MGP_NODShiLtJ_P0019126 Lman2l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019127.1 MGP_NODShiLtJ_G0015789.1 mouse_genomes_project 1 39745198 39746711 - Lman2l protein_coding retained_intron MGP_NODShiLtJ_T0024031.1 MGP_NODShiLtJ_G0016814.1 mouse_genomes_project 1 219193842 219233907 - MGP_NODShiLtJ_P0024031 Dtl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024032.1 MGP_NODShiLtJ_G0016814.1 mouse_genomes_project 1 219193851 219233930 - MGP_NODShiLtJ_P0024032 Dtl protein_coding protein_coding MGP_NODShiLtJ_T0024033.1 MGP_NODShiLtJ_G0016814.1 mouse_genomes_project 1 219195586 219233900 - Dtl protein_coding processed_transcript MGP_NODShiLtJ_T0024034.1 MGP_NODShiLtJ_G0016814.1 mouse_genomes_project 1 219207287 219233899 - MGP_NODShiLtJ_P0024034 Dtl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024035.1 MGP_NODShiLtJ_G0016814.1 mouse_genomes_project 1 219218846 219233897 - Dtl protein_coding retained_intron MGP_NODShiLtJ_T0024036.1 MGP_NODShiLtJ_G0016814.1 mouse_genomes_project 1 219229206 219233899 - Dtl protein_coding retained_intron MGP_NODShiLtJ_T0012027.1 MGP_NODShiLtJ_G0010135.1 mouse_genomes_project 1 104955756 104956545 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009456.1 MGP_NODShiLtJ_G0007589.1 mouse_genomes_project 1 186882122 186882232 + Mir214 miRNA miRNA MGP_NODShiLtJ_T0011783.1 MGP_NODShiLtJ_G0009891.1 mouse_genomes_project 1 15098060 15098653 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000487.1 MGP_NODShiLtJ_G0000423.1 mouse_genomes_project 1 72484141 72490040 + TEC TEC MGP_NODShiLtJ_T0000349.1 MGP_NODShiLtJ_G0000287.1 mouse_genomes_project 1 874392 881840 + TEC TEC MGP_NODShiLtJ_T0011928.1 MGP_NODShiLtJ_G0010036.1 mouse_genomes_project 1 65642223 65642575 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020073.1 MGP_NODShiLtJ_G0015967.1 mouse_genomes_project 1 72816401 72820945 - MGP_NODShiLtJ_P0020073 Cryge protein_coding protein_coding MGP_NODShiLtJ_T0022321.1 MGP_NODShiLtJ_G0016440.1 mouse_genomes_project 1 165802139 165876709 - Rgs21 protein_coding processed_transcript MGP_NODShiLtJ_T0022322.1 MGP_NODShiLtJ_G0016440.1 mouse_genomes_project 1 165803659 165861096 - MGP_NODShiLtJ_P0022322 Rgs21 protein_coding protein_coding MGP_NODShiLtJ_T0099786.1 MGP_NODShiLtJ_G0038180.1 mouse_genomes_project 1 122157695 122157826 - Gm24553 snoRNA snoRNA MGP_NODShiLtJ_T0005633.1 MGP_NODShiLtJ_G0004736.1 mouse_genomes_project 1 44869709 44887671 - 4930448I06Rik lincRNA lincRNA MGP_NODShiLtJ_T0000703.1 MGP_NODShiLtJ_G0000637.1 mouse_genomes_project 1 185549813 185550651 - TEC TEC MGP_NODShiLtJ_T0011792.1 MGP_NODShiLtJ_G0009900.1 mouse_genomes_project 1 17748589 17749574 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012164.1 MGP_NODShiLtJ_G0010272.1 mouse_genomes_project 1 175051322 175051563 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000559.1 MGP_NODShiLtJ_G0000495.1 mouse_genomes_project 1 107879516 107881602 + TEC TEC MGP_NODShiLtJ_T0009426.1 MGP_NODShiLtJ_G0007559.1 mouse_genomes_project 1 103943328 103943388 - Mir6900 miRNA miRNA MGP_NODShiLtJ_T0098244.1 MGP_NODShiLtJ_G0036655.1 mouse_genomes_project 1 190216494 190222147 - Gm38190 sense_intronic sense_intronic MGP_NODShiLtJ_T0023420.1 MGP_NODShiLtJ_G0016665.1 mouse_genomes_project 1 198291350 198295069 + MGP_NODShiLtJ_P0023420 Crp protein_coding protein_coding MGP_NODShiLtJ_T0023421.1 MGP_NODShiLtJ_G0016665.1 mouse_genomes_project 1 198291351 198432181 + Crp protein_coding processed_transcript MGP_NODShiLtJ_T0023477.1 MGP_NODShiLtJ_G0016696.1 mouse_genomes_project 1 200186576 200259639 + MGP_NODShiLtJ_P0023477 Spta1 protein_coding protein_coding MGP_NODShiLtJ_T0023478.1 MGP_NODShiLtJ_G0016696.1 mouse_genomes_project 1 200229877 200258728 + Spta1 protein_coding retained_intron MGP_NODShiLtJ_T0012216.1 MGP_NODShiLtJ_G0010324.1 mouse_genomes_project 1 197646672 197647002 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101490.1 MGP_NODShiLtJ_G0039660.1 mouse_genomes_project 1 115943663 115945262 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000443.1 MGP_NODShiLtJ_G0000379.1 mouse_genomes_project 1 42258138 42258642 + TEC TEC MGP_NODShiLtJ_T0011824.1 MGP_NODShiLtJ_G0009932.1 mouse_genomes_project 1 31156651 31157201 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023786.1 MGP_NODShiLtJ_G0016762.1 mouse_genomes_project 1 209291266 209319428 - MGP_NODShiLtJ_P0023786 Fbxo28 protein_coding protein_coding MGP_NODShiLtJ_T0023787.1 MGP_NODShiLtJ_G0016762.1 mouse_genomes_project 1 209293354 209296547 - Fbxo28 protein_coding retained_intron MGP_NODShiLtJ_T0023788.1 MGP_NODShiLtJ_G0016762.1 mouse_genomes_project 1 209294628 209319410 - MGP_NODShiLtJ_P0023788 Fbxo28 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023789.1 MGP_NODShiLtJ_G0016762.1 mouse_genomes_project 1 209295154 209319381 - MGP_NODShiLtJ_P0023789 Fbxo28 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023790.1 MGP_NODShiLtJ_G0016762.1 mouse_genomes_project 1 209295407 209319439 - MGP_NODShiLtJ_P0023790 Fbxo28 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000745.1 MGP_NODShiLtJ_G0000678.1 mouse_genomes_project 1 207178433 207179303 + TEC TEC MGP_NODShiLtJ_T0020486.1 MGP_NODShiLtJ_G0016045.1 mouse_genomes_project 1 84645884 84650951 - MGP_NODShiLtJ_P0020486 Tuba4a protein_coding protein_coding MGP_NODShiLtJ_T0020487.1 MGP_NODShiLtJ_G0016045.1 mouse_genomes_project 1 84646628 84650281 - MGP_NODShiLtJ_P0020487 Tuba4a protein_coding protein_coding MGP_NODShiLtJ_T0020488.1 MGP_NODShiLtJ_G0016045.1 mouse_genomes_project 1 84647268 84649091 - MGP_NODShiLtJ_P0020488 Tuba4a protein_coding protein_coding MGP_NODShiLtJ_T0020489.1 MGP_NODShiLtJ_G0016045.1 mouse_genomes_project 1 84647612 84649071 - MGP_NODShiLtJ_P0020489 Tuba4a protein_coding protein_coding MGP_NODShiLtJ_T0020490.1 MGP_NODShiLtJ_G0016045.1 mouse_genomes_project 1 84648091 84650900 - Tuba4a protein_coding retained_intron MGP_NODShiLtJ_T0020491.1 MGP_NODShiLtJ_G0016045.1 mouse_genomes_project 1 84648513 84651522 - MGP_NODShiLtJ_P0020491 Tuba4a protein_coding protein_coding MGP_NODShiLtJ_T0020492.1 MGP_NODShiLtJ_G0016045.1 mouse_genomes_project 1 84648545 84650545 - MGP_NODShiLtJ_P0020492 Tuba4a protein_coding protein_coding MGP_NODShiLtJ_T0020493.1 MGP_NODShiLtJ_G0016045.1 mouse_genomes_project 1 84648569 84650545 - MGP_NODShiLtJ_P0020493 Tuba4a protein_coding protein_coding MGP_NODShiLtJ_T0020103.1 MGP_NODShiLtJ_G0015977.1 mouse_genomes_project 1 73911543 73913762 + MGP_NODShiLtJ_P0020103 Crygf protein_coding protein_coding MGP_NODShiLtJ_T0020104.1 MGP_NODShiLtJ_G0015977.1 mouse_genomes_project 1 73911561 73913761 + MGP_NODShiLtJ_P0020104 Crygf protein_coding protein_coding MGP_NODShiLtJ_T0020061.1 MGP_NODShiLtJ_G0015965.1 mouse_genomes_project 1 72541017 72718916 - MGP_NODShiLtJ_P0020061 Plekhm3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020062.1 MGP_NODShiLtJ_G0015965.1 mouse_genomes_project 1 72545173 72718916 - MGP_NODShiLtJ_P0020062 Plekhm3 protein_coding protein_coding MGP_NODShiLtJ_T0020063.1 MGP_NODShiLtJ_G0015965.1 mouse_genomes_project 1 72549861 72594419 - Plekhm3 protein_coding processed_transcript MGP_NODShiLtJ_T0020064.1 MGP_NODShiLtJ_G0015965.1 mouse_genomes_project 1 72617868 72688508 - Plekhm3 protein_coding retained_intron MGP_NODShiLtJ_T0020065.1 MGP_NODShiLtJ_G0015965.1 mouse_genomes_project 1 72699188 72718867 - MGP_NODShiLtJ_P0020065 Plekhm3 protein_coding protein_coding MGP_NODShiLtJ_T0020066.1 MGP_NODShiLtJ_G0015965.1 mouse_genomes_project 1 72715255 72718819 - Plekhm3 protein_coding processed_transcript MGP_NODShiLtJ_T0005663.1 MGP_NODShiLtJ_G0004752.1 mouse_genomes_project 1 56950495 56951895 + Gm28322 lincRNA lincRNA MGP_NODShiLtJ_T0012036.1 MGP_NODShiLtJ_G0010144.1 mouse_genomes_project 1 113305385 113305949 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021873.1 MGP_NODShiLtJ_G0016344.1 mouse_genomes_project 1 151548558 151599430 + MGP_NODShiLtJ_P0021873 Dstyk protein_coding protein_coding MGP_NODShiLtJ_T0021874.1 MGP_NODShiLtJ_G0016344.1 mouse_genomes_project 1 151548607 151596567 + MGP_NODShiLtJ_P0021874 Dstyk protein_coding protein_coding MGP_NODShiLtJ_T0021875.1 MGP_NODShiLtJ_G0016344.1 mouse_genomes_project 1 151549380 151564990 + Dstyk protein_coding processed_transcript MGP_NODShiLtJ_T0021876.1 MGP_NODShiLtJ_G0016344.1 mouse_genomes_project 1 151581903 151584117 + MGP_NODShiLtJ_P0021876 Dstyk protein_coding protein_coding MGP_NODShiLtJ_T0021877.1 MGP_NODShiLtJ_G0016344.1 mouse_genomes_project 1 151587091 151590148 + Dstyk protein_coding retained_intron MGP_NODShiLtJ_T0021878.1 MGP_NODShiLtJ_G0016344.1 mouse_genomes_project 1 151594883 151595831 + Dstyk protein_coding retained_intron MGP_NODShiLtJ_T0016957.1 MGP_NODShiLtJ_G0014991.1 mouse_genomes_project 1 189824631 189832758 + Gm20743 processed_transcript lincRNA MGP_NODShiLtJ_T0016958.1 MGP_NODShiLtJ_G0014991.1 mouse_genomes_project 1 189824856 189898230 + Gm20743 processed_transcript antisense MGP_NODShiLtJ_T0011906.1 MGP_NODShiLtJ_G0010014.1 mouse_genomes_project 1 57411132 57412157 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011778.1 MGP_NODShiLtJ_G0009886.1 mouse_genomes_project 1 11887558 11887879 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005635.1 MGP_NODShiLtJ_G0004738.1 mouse_genomes_project 1 45584284 45792243 + Gm29260 lincRNA lincRNA MGP_NODShiLtJ_T0005636.1 MGP_NODShiLtJ_G0004738.1 mouse_genomes_project 1 45763552 45765282 + Gm29260 lincRNA lincRNA MGP_NODShiLtJ_T0019704.1 MGP_NODShiLtJ_G0015901.1 mouse_genomes_project 1 62148646 62524190 + MGP_NODShiLtJ_P0019704 Plcl1 protein_coding protein_coding MGP_NODShiLtJ_T0019705.1 MGP_NODShiLtJ_G0015901.1 mouse_genomes_project 1 62468035 62504470 + Plcl1 protein_coding processed_transcript MGP_NODShiLtJ_T0000638.1 MGP_NODShiLtJ_G0000572.1 mouse_genomes_project 1 157653138 157672672 + TEC TEC MGP_NODShiLtJ_T0020800.1 MGP_NODShiLtJ_G0016104.1 mouse_genomes_project 1 96341446 96363575 - protein_coding processed_transcript MGP_NODShiLtJ_T0020801.1 MGP_NODShiLtJ_G0016104.1 mouse_genomes_project 1 96341446 96406654 - MGP_NODShiLtJ_P0020801 protein_coding protein_coding MGP_NODShiLtJ_T0020802.1 MGP_NODShiLtJ_G0016104.1 mouse_genomes_project 1 96342046 96363623 - MGP_NODShiLtJ_P0020802 protein_coding protein_coding MGP_NODShiLtJ_T0020803.1 MGP_NODShiLtJ_G0016104.1 mouse_genomes_project 1 96342049 96363575 - MGP_NODShiLtJ_P0020803 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020804.1 MGP_NODShiLtJ_G0016104.1 mouse_genomes_project 1 96342447 96363553 - protein_coding processed_transcript MGP_NODShiLtJ_T0020805.1 MGP_NODShiLtJ_G0016104.1 mouse_genomes_project 1 96353211 96363560 - protein_coding processed_transcript MGP_NODShiLtJ_T0018791.1 MGP_NODShiLtJ_G0015719.1 mouse_genomes_project 1 15110959 15127465 - MGP_NODShiLtJ_P0018791 4930444P10Rik protein_coding protein_coding MGP_NODShiLtJ_T0018792.1 MGP_NODShiLtJ_G0015719.1 mouse_genomes_project 1 15110959 15144355 - MGP_NODShiLtJ_P0018792 4930444P10Rik protein_coding protein_coding MGP_NODShiLtJ_T0018793.1 MGP_NODShiLtJ_G0015719.1 mouse_genomes_project 1 15110959 15144355 - MGP_NODShiLtJ_P0018793 4930444P10Rik protein_coding protein_coding MGP_NODShiLtJ_T0000390.1 MGP_NODShiLtJ_G0000328.1 mouse_genomes_project 1 21155464 21157565 + TEC TEC MGP_NODShiLtJ_T0000401.1 MGP_NODShiLtJ_G0000338.1 mouse_genomes_project 1 25904624 25907204 - TEC TEC MGP_NODShiLtJ_T0099765.1 MGP_NODShiLtJ_G0038159.1 mouse_genomes_project 1 70584054 70584168 + Gm24942 snoRNA snoRNA MGP_NODShiLtJ_T0012167.1 MGP_NODShiLtJ_G0010275.1 mouse_genomes_project 1 176329206 176330584 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012063.1 MGP_NODShiLtJ_G0010171.1 mouse_genomes_project 1 124214133 124215260 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002938.1 MGP_NODShiLtJ_G0002754.1 mouse_genomes_project 1 217326524 217330020 - Gm26574 antisense antisense MGP_NODShiLtJ_T0020534.1 MGP_NODShiLtJ_G0016051.1 mouse_genomes_project 1 84793551 84801810 + MGP_NODShiLtJ_P0020534 Des protein_coding protein_coding MGP_NODShiLtJ_T0020535.1 MGP_NODShiLtJ_G0016051.1 mouse_genomes_project 1 84794739 84795614 + Des protein_coding retained_intron MGP_NODShiLtJ_T0020536.1 MGP_NODShiLtJ_G0016051.1 mouse_genomes_project 1 84795240 84796849 + Des protein_coding retained_intron MGP_NODShiLtJ_T0024048.1 MGP_NODShiLtJ_G0016817.1 mouse_genomes_project 1 219498761 219511946 + MGP_NODShiLtJ_P0024048 Nek2 protein_coding protein_coding MGP_NODShiLtJ_T0024049.1 MGP_NODShiLtJ_G0016817.1 mouse_genomes_project 1 219498827 219506669 + Nek2 protein_coding retained_intron MGP_NODShiLtJ_T0024050.1 MGP_NODShiLtJ_G0016817.1 mouse_genomes_project 1 219499499 219504200 + Nek2 protein_coding retained_intron MGP_NODShiLtJ_T0024051.1 MGP_NODShiLtJ_G0016817.1 mouse_genomes_project 1 219505522 219508365 + Nek2 protein_coding processed_transcript MGP_NODShiLtJ_T0023875.1 MGP_NODShiLtJ_G0016783.1 mouse_genomes_project 1 212407813 212454738 - MGP_NODShiLtJ_P0023875 Iars2 protein_coding protein_coding MGP_NODShiLtJ_T0023876.1 MGP_NODShiLtJ_G0016783.1 mouse_genomes_project 1 212408656 212411374 - Iars2 protein_coding processed_transcript MGP_NODShiLtJ_T0023877.1 MGP_NODShiLtJ_G0016783.1 mouse_genomes_project 1 212418137 212454738 - MGP_NODShiLtJ_P0023877 Iars2 protein_coding protein_coding MGP_NODShiLtJ_T0023878.1 MGP_NODShiLtJ_G0016783.1 mouse_genomes_project 1 212436866 212454738 - MGP_NODShiLtJ_P0023878 Iars2 protein_coding protein_coding MGP_NODShiLtJ_T0023879.1 MGP_NODShiLtJ_G0016783.1 mouse_genomes_project 1 212446525 212454738 - Iars2 protein_coding retained_intron MGP_NODShiLtJ_T0005890.1 MGP_NODShiLtJ_G0004933.1 mouse_genomes_project 1 178900328 178920931 - Gm9530 lincRNA lincRNA MGP_NODShiLtJ_T0002860.1 MGP_NODShiLtJ_G0002691.1 mouse_genomes_project 1 168963518 169010739 - antisense antisense MGP_NODShiLtJ_T0012007.1 MGP_NODShiLtJ_G0010115.1 mouse_genomes_project 1 93699195 93699983 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002854.1 MGP_NODShiLtJ_G0002686.1 mouse_genomes_project 1 155717170 155726164 + Gm26568 antisense antisense MGP_NODShiLtJ_T0000735.1 MGP_NODShiLtJ_G0000669.1 mouse_genomes_project 1 203466043 203467336 - TEC TEC MGP_NODShiLtJ_T0000384.1 MGP_NODShiLtJ_G0000322.1 mouse_genomes_project 1 14914514 14917683 + TEC TEC MGP_NODShiLtJ_T0021248.1 MGP_NODShiLtJ_G0016206.1 mouse_genomes_project 1 104761723 104831275 + MGP_NODShiLtJ_P0021248 Sned1 protein_coding protein_coding MGP_NODShiLtJ_T0021249.1 MGP_NODShiLtJ_G0016206.1 mouse_genomes_project 1 104761733 104812229 + Sned1 protein_coding retained_intron MGP_NODShiLtJ_T0021250.1 MGP_NODShiLtJ_G0016206.1 mouse_genomes_project 1 104801139 104810038 + Sned1 protein_coding processed_transcript MGP_NODShiLtJ_T0021251.1 MGP_NODShiLtJ_G0016206.1 mouse_genomes_project 1 104808957 104825990 + MGP_NODShiLtJ_P0021251 Sned1 protein_coding protein_coding MGP_NODShiLtJ_T0021252.1 MGP_NODShiLtJ_G0016206.1 mouse_genomes_project 1 104814564 104826679 + Sned1 protein_coding retained_intron MGP_NODShiLtJ_T0021253.1 MGP_NODShiLtJ_G0016206.1 mouse_genomes_project 1 104825897 104826801 + Sned1 protein_coding retained_intron MGP_NODShiLtJ_T0012255.1 MGP_NODShiLtJ_G0010363.1 mouse_genomes_project 1 220771204 220771319 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020043.1 MGP_NODShiLtJ_G0015961.1 mouse_genomes_project 1 72262486 72336483 + MGP_NODShiLtJ_P0020043 Creb1 protein_coding protein_coding MGP_NODShiLtJ_T0020044.1 MGP_NODShiLtJ_G0015961.1 mouse_genomes_project 1 72262636 72341123 + MGP_NODShiLtJ_P0020044 Creb1 protein_coding protein_coding MGP_NODShiLtJ_T0020045.1 MGP_NODShiLtJ_G0015961.1 mouse_genomes_project 1 72262645 72292704 + Creb1 protein_coding retained_intron MGP_NODShiLtJ_T0020046.1 MGP_NODShiLtJ_G0015961.1 mouse_genomes_project 1 72262650 72315733 + MGP_NODShiLtJ_P0020046 Creb1 protein_coding protein_coding MGP_NODShiLtJ_T0020047.1 MGP_NODShiLtJ_G0015961.1 mouse_genomes_project 1 72262660 72343335 + MGP_NODShiLtJ_P0020047 Creb1 protein_coding protein_coding MGP_NODShiLtJ_T0020048.1 MGP_NODShiLtJ_G0015961.1 mouse_genomes_project 1 72262700 72336255 + MGP_NODShiLtJ_P0020048 Creb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020049.1 MGP_NODShiLtJ_G0015961.1 mouse_genomes_project 1 72295563 72297205 + Creb1 protein_coding retained_intron MGP_NODShiLtJ_T0020050.1 MGP_NODShiLtJ_G0015961.1 mouse_genomes_project 1 72312476 72316666 + Creb1 protein_coding retained_intron MGP_NODShiLtJ_T0012056.1 MGP_NODShiLtJ_G0010164.1 mouse_genomes_project 1 121496914 121497939 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000716.1 MGP_NODShiLtJ_G0000650.1 mouse_genomes_project 1 190869329 190870328 - TEC TEC MGP_NODShiLtJ_T0009433.1 MGP_NODShiLtJ_G0007566.1 mouse_genomes_project 1 114318608 114318717 + Gm25537 miRNA miRNA MGP_NODShiLtJ_T0009388.1 MGP_NODShiLtJ_G0007521.1 mouse_genomes_project 1 37517648 37517727 - Mir5103 miRNA miRNA MGP_NODShiLtJ_T0000712.1 MGP_NODShiLtJ_G0000646.1 mouse_genomes_project 1 190393456 190394793 + TEC TEC MGP_NODShiLtJ_T0020567.1 MGP_NODShiLtJ_G0016055.1 mouse_genomes_project 1 84918593 84923294 - MGP_NODShiLtJ_P0020567 Chpf protein_coding protein_coding MGP_NODShiLtJ_T0020568.1 MGP_NODShiLtJ_G0016055.1 mouse_genomes_project 1 84918599 84923330 - MGP_NODShiLtJ_P0020568 Chpf protein_coding protein_coding MGP_NODShiLtJ_T0020569.1 MGP_NODShiLtJ_G0016055.1 mouse_genomes_project 1 84918600 84922770 - Chpf protein_coding retained_intron MGP_NODShiLtJ_T0020570.1 MGP_NODShiLtJ_G0016055.1 mouse_genomes_project 1 84918600 84923142 - MGP_NODShiLtJ_P0020570 Chpf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020571.1 MGP_NODShiLtJ_G0016055.1 mouse_genomes_project 1 84921533 84923137 - MGP_NODShiLtJ_P0020571 Chpf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021004.1 MGP_NODShiLtJ_G0016144.1 mouse_genomes_project 1 99025620 99344396 + MGP_NODShiLtJ_P0021004 Ugt1a9 protein_coding protein_coding MGP_NODShiLtJ_T0019799.1 MGP_NODShiLtJ_G0015918.1 mouse_genomes_project 1 65460885 65507061 - MGP_NODShiLtJ_P0019799 Orc2 protein_coding protein_coding MGP_NODShiLtJ_T0019800.1 MGP_NODShiLtJ_G0015918.1 mouse_genomes_project 1 65462318 65503368 - MGP_NODShiLtJ_P0019800 Orc2 protein_coding protein_coding MGP_NODShiLtJ_T0019801.1 MGP_NODShiLtJ_G0015918.1 mouse_genomes_project 1 65480134 65481273 - Orc2 protein_coding retained_intron MGP_NODShiLtJ_T0019802.1 MGP_NODShiLtJ_G0015918.1 mouse_genomes_project 1 65484329 65506877 - MGP_NODShiLtJ_P0019802 Orc2 protein_coding protein_coding MGP_NODShiLtJ_T0019803.1 MGP_NODShiLtJ_G0015918.1 mouse_genomes_project 1 65501538 65506907 - MGP_NODShiLtJ_P0019803 Orc2 protein_coding protein_coding MGP_NODShiLtJ_T0022922.1 MGP_NODShiLtJ_G0016551.1 mouse_genomes_project 1 189114378 189131756 + MGP_NODShiLtJ_P0022922 Slc19a2 protein_coding protein_coding MGP_NODShiLtJ_T0022923.1 MGP_NODShiLtJ_G0016551.1 mouse_genomes_project 1 189114387 189131740 + MGP_NODShiLtJ_P0022923 Slc19a2 protein_coding protein_coding MGP_NODShiLtJ_T0022924.1 MGP_NODShiLtJ_G0016551.1 mouse_genomes_project 1 189114585 189129889 + MGP_NODShiLtJ_P0022924 Slc19a2 protein_coding protein_coding MGP_NODShiLtJ_T0022925.1 MGP_NODShiLtJ_G0016551.1 mouse_genomes_project 1 189128723 189129822 + Slc19a2 protein_coding retained_intron MGP_NODShiLtJ_T0016870.1 MGP_NODShiLtJ_G0014966.1 mouse_genomes_project 1 48146767 48165416 - Gm29247 processed_transcript processed_transcript MGP_NODShiLtJ_T0016871.1 MGP_NODShiLtJ_G0014966.1 mouse_genomes_project 1 48146868 48166160 - Gm29247 processed_transcript processed_transcript MGP_NODShiLtJ_T0000734.1 MGP_NODShiLtJ_G0000668.1 mouse_genomes_project 1 203385592 203386893 - TEC TEC MGP_NODShiLtJ_T0023999.1 MGP_NODShiLtJ_G0016805.1 mouse_genomes_project 1 218639597 218647066 + MGP_NODShiLtJ_P0023999 Spata45 protein_coding protein_coding MGP_NODShiLtJ_T0024000.1 MGP_NODShiLtJ_G0016805.1 mouse_genomes_project 1 218639777 218647073 + MGP_NODShiLtJ_P0024000 Spata45 protein_coding protein_coding MGP_NODShiLtJ_T0011827.1 MGP_NODShiLtJ_G0009935.1 mouse_genomes_project 1 33653360 33653585 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002942.1 MGP_NODShiLtJ_G0002758.1 mouse_genomes_project 1 218627031 218627868 + A230020J21Rik antisense antisense MGP_NODShiLtJ_T0002943.1 MGP_NODShiLtJ_G0002758.1 mouse_genomes_project 1 218627032 218631445 + A230020J21Rik antisense antisense MGP_NODShiLtJ_T0098560.1 MGP_NODShiLtJ_G0036954.1 mouse_genomes_project 1 149533907 149534014 - Gm23623 snRNA snRNA MGP_NODShiLtJ_T0011905.1 MGP_NODShiLtJ_G0010013.1 mouse_genomes_project 1 56445058 56445220 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022243.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158789350 158901050 + MGP_NODShiLtJ_P0022243 Dennd1b protein_coding protein_coding MGP_NODShiLtJ_T0022244.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158789624 159018861 + MGP_NODShiLtJ_P0022244 Dennd1b protein_coding protein_coding MGP_NODShiLtJ_T0022245.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158789643 158924125 + MGP_NODShiLtJ_P0022245 Dennd1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022246.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158789784 159021766 + MGP_NODShiLtJ_P0022246 Dennd1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022247.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158794190 159018861 + MGP_NODShiLtJ_P0022247 Dennd1b protein_coding protein_coding MGP_NODShiLtJ_T0022248.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158890498 158893294 + Dennd1b protein_coding retained_intron MGP_NODShiLtJ_T0022249.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158924120 158970621 + Dennd1b protein_coding retained_intron MGP_NODShiLtJ_T0022250.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158960382 159018801 + Dennd1b protein_coding processed_transcript MGP_NODShiLtJ_T0022251.1 MGP_NODShiLtJ_G0016422.1 mouse_genomes_project 1 158967976 159016912 + Dennd1b protein_coding processed_transcript MGP_NODShiLtJ_T0011995.1 MGP_NODShiLtJ_G0010103.1 mouse_genomes_project 1 90322713 90324795 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101257.1 MGP_NODShiLtJ_G0039541.1 mouse_genomes_project 1 95685820 95686966 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0002812.1 MGP_NODShiLtJ_G0002657.1 mouse_genomes_project 1 105188589 105189905 + Gm28536 antisense antisense MGP_NODShiLtJ_T0005641.1 MGP_NODShiLtJ_G0004742.1 mouse_genomes_project 1 46225391 46253276 - Gm28140 lincRNA lincRNA MGP_NODShiLtJ_T0011127.1 MGP_NODShiLtJ_G0009260.1 mouse_genomes_project 1 12816173 12816481 + Gm25491 misc_RNA misc_RNA MGP_NODShiLtJ_T0101473.1 MGP_NODShiLtJ_G0039643.1 mouse_genomes_project 1 73247832 73248512 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000537.1 MGP_NODShiLtJ_G0000473.1 mouse_genomes_project 1 97560811 97567066 + TEC TEC MGP_NODShiLtJ_T0005798.1 MGP_NODShiLtJ_G0004860.1 mouse_genomes_project 1 120543869 120554804 - Gm7160 lincRNA lincRNA MGP_NODShiLtJ_T0005799.1 MGP_NODShiLtJ_G0004860.1 mouse_genomes_project 1 120553756 120554774 - Gm7160 lincRNA lincRNA MGP_NODShiLtJ_T0021259.1 MGP_NODShiLtJ_G0016208.1 mouse_genomes_project 1 104838967 104847604 - Pask protein_coding retained_intron MGP_NODShiLtJ_T0021260.1 MGP_NODShiLtJ_G0016208.1 mouse_genomes_project 1 104838975 104874559 - MGP_NODShiLtJ_P0021260 Pask protein_coding protein_coding MGP_NODShiLtJ_T0021261.1 MGP_NODShiLtJ_G0016208.1 mouse_genomes_project 1 104840035 104843347 - Pask protein_coding retained_intron MGP_NODShiLtJ_T0021262.1 MGP_NODShiLtJ_G0016208.1 mouse_genomes_project 1 104840282 104841542 - Pask protein_coding retained_intron MGP_NODShiLtJ_T0021263.1 MGP_NODShiLtJ_G0016208.1 mouse_genomes_project 1 104848018 104875235 - Pask protein_coding retained_intron MGP_NODShiLtJ_T0021264.1 MGP_NODShiLtJ_G0016208.1 mouse_genomes_project 1 104868353 104875252 - MGP_NODShiLtJ_P0021264 Pask protein_coding protein_coding MGP_NODShiLtJ_T0019345.1 MGP_NODShiLtJ_G0015830.1 mouse_genomes_project 1 43665180 43705176 + MGP_NODShiLtJ_P0019345 Il1r2 protein_coding protein_coding MGP_NODShiLtJ_T0019346.1 MGP_NODShiLtJ_G0015830.1 mouse_genomes_project 1 43676708 43725355 + MGP_NODShiLtJ_P0019346 Il1r2 protein_coding protein_coding MGP_NODShiLtJ_T0019347.1 MGP_NODShiLtJ_G0015830.1 mouse_genomes_project 1 43676802 43725343 + MGP_NODShiLtJ_P0019347 Il1r2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019348.1 MGP_NODShiLtJ_G0015830.1 mouse_genomes_project 1 43677986 43695477 + MGP_NODShiLtJ_P0019348 Il1r2 protein_coding protein_coding MGP_NODShiLtJ_T0022718.1 MGP_NODShiLtJ_G0016510.1 mouse_genomes_project 1 184439881 184513849 - MGP_NODShiLtJ_P0022718 Tnn protein_coding protein_coding MGP_NODShiLtJ_T0022719.1 MGP_NODShiLtJ_G0016510.1 mouse_genomes_project 1 184440820 184508157 - MGP_NODShiLtJ_P0022719 Tnn protein_coding protein_coding MGP_NODShiLtJ_T0019156.1 MGP_NODShiLtJ_G0015796.1 mouse_genomes_project 1 40007691 40009889 + MGP_NODShiLtJ_P0019156 Cox5b protein_coding protein_coding MGP_NODShiLtJ_T0019157.1 MGP_NODShiLtJ_G0015796.1 mouse_genomes_project 1 40007817 40009594 + MGP_NODShiLtJ_P0019157 Cox5b protein_coding protein_coding MGP_NODShiLtJ_T0019158.1 MGP_NODShiLtJ_G0015796.1 mouse_genomes_project 1 40007835 40008758 + Cox5b protein_coding retained_intron MGP_NODShiLtJ_T0019159.1 MGP_NODShiLtJ_G0015796.1 mouse_genomes_project 1 40007849 40008715 + Cox5b protein_coding retained_intron MGP_NODShiLtJ_T0019160.1 MGP_NODShiLtJ_G0015796.1 mouse_genomes_project 1 40007851 40009593 + Cox5b protein_coding processed_transcript MGP_NODShiLtJ_T0019161.1 MGP_NODShiLtJ_G0015796.1 mouse_genomes_project 1 40007895 40009594 + MGP_NODShiLtJ_P0019161 Cox5b protein_coding protein_coding MGP_NODShiLtJ_T0021384.1 MGP_NODShiLtJ_G0016234.1 mouse_genomes_project 1 111282574 111401180 + MGP_NODShiLtJ_P0021384 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098588.1 MGP_NODShiLtJ_G0036982.1 mouse_genomes_project 1 202972367 202972475 + Gm26104 snRNA snRNA MGP_NODShiLtJ_T0101480.1 MGP_NODShiLtJ_G0039650.1 mouse_genomes_project 1 99144462 99144860 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0023464.1 MGP_NODShiLtJ_G0016685.1 mouse_genomes_project 1 199761660 199985787 - protein_coding retained_intron MGP_NODShiLtJ_T0023467.1 MGP_NODShiLtJ_G0016685.1 mouse_genomes_project 1 199957103 199985732 - MGP_NODShiLtJ_P0023467 protein_coding protein_coding MGP_NODShiLtJ_T0021528.1 MGP_NODShiLtJ_G0016266.1 mouse_genomes_project 1 136924966 136931763 - MGP_NODShiLtJ_P0021528 Inhbb protein_coding protein_coding MGP_NODShiLtJ_T0000663.1 MGP_NODShiLtJ_G0000597.1 mouse_genomes_project 1 175023736 175026763 - TEC TEC MGP_NODShiLtJ_T0021010.1 MGP_NODShiLtJ_G0016147.1 mouse_genomes_project 1 99125818 99342820 + protein_coding retained_intron MGP_NODShiLtJ_T0021011.1 MGP_NODShiLtJ_G0016147.1 mouse_genomes_project 1 99125818 99344396 + MGP_NODShiLtJ_P0021011 protein_coding protein_coding MGP_NODShiLtJ_T0021012.1 MGP_NODShiLtJ_G0016147.1 mouse_genomes_project 1 99125884 99341804 + MGP_NODShiLtJ_P0021012 protein_coding protein_coding MGP_NODShiLtJ_T0021013.1 MGP_NODShiLtJ_G0016147.1 mouse_genomes_project 1 99130227 99344396 + MGP_NODShiLtJ_P0021013 protein_coding protein_coding MGP_NODShiLtJ_T0023283.1 MGP_NODShiLtJ_G0016631.1 mouse_genomes_project 1 196897959 196898454 + Tstd1 protein_coding processed_transcript MGP_NODShiLtJ_T0023284.1 MGP_NODShiLtJ_G0016631.1 mouse_genomes_project 1 196898120 196899448 + MGP_NODShiLtJ_P0023284 Tstd1 protein_coding protein_coding MGP_NODShiLtJ_T0023285.1 MGP_NODShiLtJ_G0016631.1 mouse_genomes_project 1 196898815 196899447 + Tstd1 protein_coding retained_intron MGP_NODShiLtJ_T0011849.1 MGP_NODShiLtJ_G0009957.1 mouse_genomes_project 1 37886135 37886283 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019695.1 MGP_NODShiLtJ_G0015899.1 mouse_genomes_project 1 61961307 61972607 + MGP_NODShiLtJ_P0019695 Mars2 protein_coding protein_coding MGP_NODShiLtJ_T0011733.1 MGP_NODShiLtJ_G0009841.1 mouse_genomes_project 1 1904357 1908190 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020818.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96679390 96687244 + Spata3 protein_coding processed_transcript MGP_NODShiLtJ_T0020819.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96681267 96691695 + Spata3 protein_coding processed_transcript MGP_NODShiLtJ_T0020820.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684516 96692405 + MGP_NODShiLtJ_P0020820 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0020821.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684517 96687241 + MGP_NODShiLtJ_P0020821 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0020822.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684520 96687243 + MGP_NODShiLtJ_P0020822 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0020823.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684520 96692405 + MGP_NODShiLtJ_P0020823 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0020824.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684520 96689753 + MGP_NODShiLtJ_P0020824 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0020825.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684527 96692368 + MGP_NODShiLtJ_P0020825 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0020826.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684534 96691709 + MGP_NODShiLtJ_P0020826 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0020827.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684535 96687244 + MGP_NODShiLtJ_P0020827 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0020828.1 MGP_NODShiLtJ_G0016109.1 mouse_genomes_project 1 96684679 96691711 + MGP_NODShiLtJ_P0020828 Spata3 protein_coding protein_coding MGP_NODShiLtJ_T0011831.1 MGP_NODShiLtJ_G0009939.1 mouse_genomes_project 1 34350232 34351065 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019403.1 MGP_NODShiLtJ_G0015844.1 mouse_genomes_project 1 47073095 47090349 + MGP_NODShiLtJ_P0019403 AI597479 protein_coding protein_coding MGP_NODShiLtJ_T0005800.1 MGP_NODShiLtJ_G0004861.1 mouse_genomes_project 1 120721757 120740636 - Gm20753 lincRNA lincRNA MGP_NODShiLtJ_T0000428.1 MGP_NODShiLtJ_G0000364.1 mouse_genomes_project 1 36950888 36952516 - TEC TEC MGP_NODShiLtJ_T0000356.1 MGP_NODShiLtJ_G0000294.1 mouse_genomes_project 1 3440671 3442532 - TEC TEC MGP_NODShiLtJ_T0012087.1 MGP_NODShiLtJ_G0010195.1 mouse_genomes_project 1 136655378 136656358 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002817.1 MGP_NODShiLtJ_G0002660.1 mouse_genomes_project 1 119360787 119361762 - Gm15699 antisense antisense MGP_NODShiLtJ_T0002756.1 MGP_NODShiLtJ_G0002614.1 mouse_genomes_project 1 59483299 59484882 + Gm28777 antisense antisense MGP_NODShiLtJ_T0011985.1 MGP_NODShiLtJ_G0010093.1 mouse_genomes_project 1 85082613 85084457 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000631.1 MGP_NODShiLtJ_G0000566.1 mouse_genomes_project 1 157443844 157449952 - TEC TEC MGP_NODShiLtJ_T0011781.1 MGP_NODShiLtJ_G0009889.1 mouse_genomes_project 1 14822450 14822997 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002910.1 MGP_NODShiLtJ_G0002730.1 mouse_genomes_project 1 197806178 197807178 + Gm37950 antisense antisense MGP_NODShiLtJ_T0019181.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40378245 40434648 + MGP_NODShiLtJ_P0019181 Vwa3b protein_coding protein_coding MGP_NODShiLtJ_T0019182.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40380956 40418728 + MGP_NODShiLtJ_P0019182 Vwa3b protein_coding non_stop_decay MGP_NODShiLtJ_T0019183.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40380968 40434647 + MGP_NODShiLtJ_P0019183 Vwa3b protein_coding protein_coding MGP_NODShiLtJ_T0019184.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40381036 40434377 + MGP_NODShiLtJ_P0019184 Vwa3b protein_coding protein_coding MGP_NODShiLtJ_T0019185.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40387009 40558944 + MGP_NODShiLtJ_P0019185 Vwa3b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019186.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40387055 40559104 + MGP_NODShiLtJ_P0019186 Vwa3b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019187.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40459329 40467890 + Vwa3b protein_coding retained_intron MGP_NODShiLtJ_T0019188.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40459466 40492345 + Vwa3b protein_coding processed_transcript MGP_NODShiLtJ_T0019189.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40499484 40506387 + MGP_NODShiLtJ_P0019189 Vwa3b protein_coding protein_coding MGP_NODShiLtJ_T0019190.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40519980 40559940 + MGP_NODShiLtJ_P0019190 Vwa3b protein_coding protein_coding MGP_NODShiLtJ_T0019191.1 MGP_NODShiLtJ_G0015800.1 mouse_genomes_project 1 40559189 40559948 + Vwa3b protein_coding retained_intron MGP_NODShiLtJ_T0099764.1 MGP_NODShiLtJ_G0038158.1 mouse_genomes_project 1 66890140 66890224 + Snord11 snoRNA snoRNA MGP_NODShiLtJ_T0012155.1 MGP_NODShiLtJ_G0010263.1 mouse_genomes_project 1 171967785 171972666 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002711.1 MGP_NODShiLtJ_G0002579.1 mouse_genomes_project 1 15325032 15339177 + Gm7568 antisense antisense MGP_NODShiLtJ_T0002712.1 MGP_NODShiLtJ_G0002579.1 mouse_genomes_project 1 15325032 15330175 + Gm7568 antisense antisense MGP_NODShiLtJ_T0002713.1 MGP_NODShiLtJ_G0002579.1 mouse_genomes_project 1 15325069 15330171 + Gm7568 antisense antisense MGP_NODShiLtJ_T0000528.1 MGP_NODShiLtJ_G0000464.1 mouse_genomes_project 1 93718096 93719385 - TEC TEC MGP_NODShiLtJ_T0021811.1 MGP_NODShiLtJ_G0016331.1 mouse_genomes_project 1 150826273 150852723 + MGP_NODShiLtJ_P0021811 Pm20d1 protein_coding protein_coding MGP_NODShiLtJ_T0021812.1 MGP_NODShiLtJ_G0016331.1 mouse_genomes_project 1 150826290 150852735 + MGP_NODShiLtJ_P0021812 Pm20d1 protein_coding protein_coding MGP_NODShiLtJ_T0021813.1 MGP_NODShiLtJ_G0016331.1 mouse_genomes_project 1 150841022 150846263 + MGP_NODShiLtJ_P0021813 Pm20d1 protein_coding protein_coding MGP_NODShiLtJ_T0021814.1 MGP_NODShiLtJ_G0016331.1 mouse_genomes_project 1 150841060 150841298 + Pm20d1 protein_coding processed_transcript MGP_NODShiLtJ_T0021326.1 MGP_NODShiLtJ_G0016218.1 mouse_genomes_project 1 105361481 105370874 - MGP_NODShiLtJ_P0021326 Dtymk protein_coding protein_coding MGP_NODShiLtJ_T0021327.1 MGP_NODShiLtJ_G0016218.1 mouse_genomes_project 1 105361629 105367947 - MGP_NODShiLtJ_P0021327 Dtymk protein_coding protein_coding MGP_NODShiLtJ_T0021328.1 MGP_NODShiLtJ_G0016218.1 mouse_genomes_project 1 105367325 105368307 - Dtymk protein_coding processed_transcript MGP_NODShiLtJ_T0021329.1 MGP_NODShiLtJ_G0016218.1 mouse_genomes_project 1 105369003 105370846 - MGP_NODShiLtJ_P0021329 Dtymk protein_coding protein_coding MGP_NODShiLtJ_T0005812.1 MGP_NODShiLtJ_G0004871.1 mouse_genomes_project 1 136809879 136833138 - Gm29456 lincRNA lincRNA MGP_NODShiLtJ_T0000577.1 MGP_NODShiLtJ_G0000513.1 mouse_genomes_project 1 139002719 139003381 - TEC TEC MGP_NODShiLtJ_T0002826.1 MGP_NODShiLtJ_G0002665.1 mouse_genomes_project 1 139204342 139208250 - Gm15392 antisense antisense MGP_NODShiLtJ_T0011991.1 MGP_NODShiLtJ_G0010099.1 mouse_genomes_project 1 89802745 89804564 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005865.1 MGP_NODShiLtJ_G0004913.1 mouse_genomes_project 1 157946320 157951526 - lincRNA lincRNA MGP_NODShiLtJ_T0099772.1 MGP_NODShiLtJ_G0038166.1 mouse_genomes_project 1 89361585 89361711 - Gm24160 snoRNA snoRNA MGP_NODShiLtJ_T0000550.1 MGP_NODShiLtJ_G0000486.1 mouse_genomes_project 1 101573208 101574567 - TEC TEC MGP_NODShiLtJ_T0002789.1 MGP_NODShiLtJ_G0002635.1 mouse_genomes_project 1 84683673 84688577 + Gm28294 antisense antisense MGP_NODShiLtJ_T0002730.1 MGP_NODShiLtJ_G0002593.1 mouse_genomes_project 1 39830737 39831441 - Gm38033 antisense antisense MGP_NODShiLtJ_T0019578.1 MGP_NODShiLtJ_G0015875.1 mouse_genomes_project 1 58862277 58939072 - MGP_NODShiLtJ_P0019578 Mfsd6 protein_coding protein_coding MGP_NODShiLtJ_T0019579.1 MGP_NODShiLtJ_G0015875.1 mouse_genomes_project 1 58862289 58938965 - MGP_NODShiLtJ_P0019579 Mfsd6 protein_coding protein_coding MGP_NODShiLtJ_T0019580.1 MGP_NODShiLtJ_G0015875.1 mouse_genomes_project 1 58863425 58866238 - Mfsd6 protein_coding retained_intron MGP_NODShiLtJ_T0019581.1 MGP_NODShiLtJ_G0015875.1 mouse_genomes_project 1 58865944 58939072 - MGP_NODShiLtJ_P0019581 Mfsd6 protein_coding protein_coding MGP_NODShiLtJ_T0019582.1 MGP_NODShiLtJ_G0015875.1 mouse_genomes_project 1 58866844 58876064 - Mfsd6 protein_coding processed_transcript MGP_NODShiLtJ_T0019583.1 MGP_NODShiLtJ_G0015875.1 mouse_genomes_project 1 58882323 58938968 - Mfsd6 protein_coding retained_intron MGP_NODShiLtJ_T0020223.1 MGP_NODShiLtJ_G0015995.1 mouse_genomes_project 1 81538471 81565608 - MGP_NODShiLtJ_P0020223 Pecr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020224.1 MGP_NODShiLtJ_G0015995.1 mouse_genomes_project 1 81538476 81565662 - MGP_NODShiLtJ_P0020224 Pecr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020225.1 MGP_NODShiLtJ_G0015995.1 mouse_genomes_project 1 81538476 81565663 - MGP_NODShiLtJ_P0020225 Pecr protein_coding protein_coding MGP_NODShiLtJ_T0020226.1 MGP_NODShiLtJ_G0015995.1 mouse_genomes_project 1 81546300 81565608 - MGP_NODShiLtJ_P0020226 Pecr protein_coding protein_coding MGP_NODShiLtJ_T0000497.1 MGP_NODShiLtJ_G0000433.1 mouse_genomes_project 1 77135468 77139015 - TEC TEC MGP_NODShiLtJ_T0021352.1 MGP_NODShiLtJ_G0016230.1 mouse_genomes_project 1 110401062 110464611 - MGP_NODShiLtJ_P0021352 D1Ertd622e protein_coding protein_coding MGP_NODShiLtJ_T0021353.1 MGP_NODShiLtJ_G0016230.1 mouse_genomes_project 1 110444378 110464611 - MGP_NODShiLtJ_P0021353 D1Ertd622e protein_coding protein_coding MGP_NODShiLtJ_T0021354.1 MGP_NODShiLtJ_G0016230.1 mouse_genomes_project 1 110444378 110464213 - MGP_NODShiLtJ_P0021354 D1Ertd622e protein_coding protein_coding MGP_NODShiLtJ_T0021355.1 MGP_NODShiLtJ_G0016230.1 mouse_genomes_project 1 110447673 110464213 - MGP_NODShiLtJ_P0021355 D1Ertd622e protein_coding protein_coding MGP_NODShiLtJ_T0002894.1 MGP_NODShiLtJ_G0002717.1 mouse_genomes_project 1 190872397 190873289 - Gm37469 antisense antisense MGP_NODShiLtJ_T0021543.1 MGP_NODShiLtJ_G0016270.1 mouse_genomes_project 1 137189572 137424716 - MGP_NODShiLtJ_P0021543 Ptpn4 protein_coding protein_coding MGP_NODShiLtJ_T0021544.1 MGP_NODShiLtJ_G0016270.1 mouse_genomes_project 1 137195149 137230169 - MGP_NODShiLtJ_P0021544 Ptpn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021545.1 MGP_NODShiLtJ_G0016270.1 mouse_genomes_project 1 137232190 137424450 - MGP_NODShiLtJ_P0021545 Ptpn4 protein_coding protein_coding MGP_NODShiLtJ_T0021546.1 MGP_NODShiLtJ_G0016270.1 mouse_genomes_project 1 137235213 137305443 - MGP_NODShiLtJ_P0021546 Ptpn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021547.1 MGP_NODShiLtJ_G0016270.1 mouse_genomes_project 1 137262546 137273707 - Ptpn4 protein_coding retained_intron MGP_NODShiLtJ_T0021548.1 MGP_NODShiLtJ_G0016270.1 mouse_genomes_project 1 137286124 137352665 - MGP_NODShiLtJ_P0021548 Ptpn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021549.1 MGP_NODShiLtJ_G0016270.1 mouse_genomes_project 1 137307411 137386339 - MGP_NODShiLtJ_P0021549 Ptpn4 protein_coding protein_coding MGP_NODShiLtJ_T0021550.1 MGP_NODShiLtJ_G0016270.1 mouse_genomes_project 1 137345138 137386359 - MGP_NODShiLtJ_P0021550 Ptpn4 protein_coding protein_coding MGP_NODShiLtJ_T0000372.1 MGP_NODShiLtJ_G0000310.1 mouse_genomes_project 1 12017932 12021500 - TEC TEC MGP_NODShiLtJ_T0005719.1 MGP_NODShiLtJ_G0004795.1 mouse_genomes_project 1 81494827 81545441 + D230017M19Rik lincRNA lincRNA MGP_NODShiLtJ_T0005720.1 MGP_NODShiLtJ_G0004795.1 mouse_genomes_project 1 81517265 81556124 + D230017M19Rik lincRNA lincRNA MGP_NODShiLtJ_T0005721.1 MGP_NODShiLtJ_G0004795.1 mouse_genomes_project 1 81543997 81546483 + D230017M19Rik lincRNA lincRNA MGP_NODShiLtJ_T0101521.1 MGP_NODShiLtJ_G0039691.1 mouse_genomes_project 1 207948070 207957109 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000389.1 MGP_NODShiLtJ_G0000327.1 mouse_genomes_project 1 19884073 19888380 - TEC TEC MGP_NODShiLtJ_T0023729.1 MGP_NODShiLtJ_G0016750.1 mouse_genomes_project 1 207924997 207934467 + MGP_NODShiLtJ_P0023729 9130409I23Rik protein_coding protein_coding MGP_NODShiLtJ_T0000510.1 MGP_NODShiLtJ_G0000446.1 mouse_genomes_project 1 84912612 84914802 - TEC TEC MGP_NODShiLtJ_T0101256.1 MGP_NODShiLtJ_G0039540.1 mouse_genomes_project 1 65940510 65940640 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0012121.1 MGP_NODShiLtJ_G0010229.1 mouse_genomes_project 1 152786246 152787009 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022490.1 MGP_NODShiLtJ_G0016471.1 mouse_genomes_project 1 177453148 177458264 + MGP_NODShiLtJ_P0022490 Rgs16 protein_coding protein_coding MGP_NODShiLtJ_T0021330.1 MGP_NODShiLtJ_G0016219.1 mouse_genomes_project 1 105372942 105393680 + MGP_NODShiLtJ_P0021330 Ing5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021331.1 MGP_NODShiLtJ_G0016219.1 mouse_genomes_project 1 105372962 105393685 + MGP_NODShiLtJ_P0021331 Ing5 protein_coding protein_coding MGP_NODShiLtJ_T0021282.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019403 105042235 + MGP_NODShiLtJ_P0021282 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021283.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019406 105043622 + MGP_NODShiLtJ_P0021283 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021284.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019416 105053381 + MGP_NODShiLtJ_P0021284 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021285.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019434 105040890 + Sept2 protein_coding retained_intron MGP_NODShiLtJ_T0021286.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019448 105040496 + MGP_NODShiLtJ_P0021286 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021287.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019472 105022777 + Sept2 protein_coding retained_intron MGP_NODShiLtJ_T0021288.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019472 105043626 + MGP_NODShiLtJ_P0021288 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021289.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019521 105043651 + MGP_NODShiLtJ_P0021289 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021290.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019633 105042153 + MGP_NODShiLtJ_P0021290 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021291.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019636 105042235 + MGP_NODShiLtJ_P0021291 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021292.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105019886 105043649 + MGP_NODShiLtJ_P0021292 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0021293.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105048309 105050136 + Sept2 protein_coding retained_intron MGP_NODShiLtJ_T0021294.1 MGP_NODShiLtJ_G0016212.1 mouse_genomes_project 1 105048684 105050463 + MGP_NODShiLtJ_P0021294 Sept2 protein_coding protein_coding MGP_NODShiLtJ_T0022594.1 MGP_NODShiLtJ_G0016490.1 mouse_genomes_project 1 180013009 180105960 - MGP_NODShiLtJ_P0022594 Fam163a protein_coding protein_coding MGP_NODShiLtJ_T0019521.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57872165 58042944 - MGP_NODShiLtJ_P0019521 Myo1b protein_coding protein_coding MGP_NODShiLtJ_T0019522.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57872381 58042814 - MGP_NODShiLtJ_P0019522 Myo1b protein_coding protein_coding MGP_NODShiLtJ_T0019523.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57872388 58034138 - MGP_NODShiLtJ_P0019523 Myo1b protein_coding protein_coding MGP_NODShiLtJ_T0019524.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57872393 58042801 - MGP_NODShiLtJ_P0019524 Myo1b protein_coding protein_coding MGP_NODShiLtJ_T0019525.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57883758 57887885 - Myo1b protein_coding retained_intron MGP_NODShiLtJ_T0019526.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57885936 57894285 - Myo1b protein_coding processed_transcript MGP_NODShiLtJ_T0019527.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57886004 57890808 - Myo1b protein_coding retained_intron MGP_NODShiLtJ_T0019528.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57890291 57899861 - Myo1b protein_coding processed_transcript MGP_NODShiLtJ_T0019529.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57899817 57918697 - Myo1b protein_coding processed_transcript MGP_NODShiLtJ_T0019530.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57903157 57905656 - Myo1b protein_coding retained_intron MGP_NODShiLtJ_T0019531.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57920885 58022423 - MGP_NODShiLtJ_P0019531 Myo1b protein_coding protein_coding MGP_NODShiLtJ_T0019532.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57923857 57944818 - Myo1b protein_coding processed_transcript MGP_NODShiLtJ_T0019533.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57934977 58042785 - Myo1b protein_coding retained_intron MGP_NODShiLtJ_T0019534.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57958709 57975396 - Myo1b protein_coding processed_transcript MGP_NODShiLtJ_T0019535.1 MGP_NODShiLtJ_G0015869.1 mouse_genomes_project 1 57990073 58042794 - Myo1b protein_coding retained_intron MGP_NODShiLtJ_T0021370.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110631557 110682863 - MGP_NODShiLtJ_P0021370 Pam protein_coding protein_coding MGP_NODShiLtJ_T0021371.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110660632 110947709 - MGP_NODShiLtJ_P0021371 Pam protein_coding protein_coding MGP_NODShiLtJ_T0021372.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110660633 110947720 - MGP_NODShiLtJ_P0021372 Pam protein_coding protein_coding MGP_NODShiLtJ_T0021373.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110660638 110820075 - MGP_NODShiLtJ_P0021373 Pam protein_coding protein_coding MGP_NODShiLtJ_T0021374.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110661226 110682441 - MGP_NODShiLtJ_P0021374 Pam protein_coding protein_coding MGP_NODShiLtJ_T0021375.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110661486 110676699 - Pam protein_coding retained_intron MGP_NODShiLtJ_T0021376.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110667710 110682933 - Pam protein_coding retained_intron MGP_NODShiLtJ_T0021377.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110679583 110682443 - Pam protein_coding retained_intron MGP_NODShiLtJ_T0021378.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110694949 110707230 - Pam protein_coding retained_intron MGP_NODShiLtJ_T0021379.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110696658 110730790 - MGP_NODShiLtJ_P0021379 Pam protein_coding protein_coding MGP_NODShiLtJ_T0021380.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110776382 110819888 - Pam protein_coding retained_intron MGP_NODShiLtJ_T0021381.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110799185 110820064 - Pam protein_coding processed_transcript MGP_NODShiLtJ_T0021382.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110904274 110908168 - Pam protein_coding retained_intron MGP_NODShiLtJ_T0021383.1 MGP_NODShiLtJ_G0016233.1 mouse_genomes_project 1 110908257 110947734 - Pam protein_coding processed_transcript MGP_NODShiLtJ_T0009403.1 MGP_NODShiLtJ_G0007536.1 mouse_genomes_project 1 70730349 70730436 + Gm24557 miRNA miRNA MGP_NODShiLtJ_T0000590.1 MGP_NODShiLtJ_G0000526.1 mouse_genomes_project 1 143179147 143183167 - TEC TEC MGP_NODShiLtJ_T0000462.1 MGP_NODShiLtJ_G0000398.1 mouse_genomes_project 1 61167459 61169120 - TEC TEC MGP_NODShiLtJ_T0002770.1 MGP_NODShiLtJ_G0002624.1 mouse_genomes_project 1 69212032 69308982 - Pard3bos1 antisense antisense MGP_NODShiLtJ_T0002771.1 MGP_NODShiLtJ_G0002624.1 mouse_genomes_project 1 69235775 69309060 - Pard3bos1 antisense antisense MGP_NODShiLtJ_T0098526.1 MGP_NODShiLtJ_G0036920.1 mouse_genomes_project 1 65465864 65465971 - Gm23966 snRNA snRNA MGP_NODShiLtJ_T0009460.1 MGP_NODShiLtJ_G0007593.1 mouse_genomes_project 1 193661228 193661348 + Mir6348 miRNA miRNA MGP_NODShiLtJ_T0021356.1 MGP_NODShiLtJ_G0016231.1 mouse_genomes_project 1 110504412 110517774 - protein_coding retained_intron MGP_NODShiLtJ_T0021357.1 MGP_NODShiLtJ_G0016231.1 mouse_genomes_project 1 110504412 110605817 - MGP_NODShiLtJ_P0021357 protein_coding protein_coding MGP_NODShiLtJ_T0021358.1 MGP_NODShiLtJ_G0016231.1 mouse_genomes_project 1 110504412 110605817 - MGP_NODShiLtJ_P0021358 protein_coding protein_coding MGP_NODShiLtJ_T0021359.1 MGP_NODShiLtJ_G0016231.1 mouse_genomes_project 1 110509365 110596009 - MGP_NODShiLtJ_P0021359 protein_coding protein_coding MGP_NODShiLtJ_T0021360.1 MGP_NODShiLtJ_G0016231.1 mouse_genomes_project 1 110514058 110519177 - MGP_NODShiLtJ_P0021360 protein_coding protein_coding MGP_NODShiLtJ_T0021361.1 MGP_NODShiLtJ_G0016231.1 mouse_genomes_project 1 110521905 110524438 - protein_coding retained_intron MGP_NODShiLtJ_T0021362.1 MGP_NODShiLtJ_G0016231.1 mouse_genomes_project 1 110559218 110563177 - protein_coding retained_intron MGP_NODShiLtJ_T0000347.1 MGP_NODShiLtJ_G0000285.1 mouse_genomes_project 1 676622 678679 - TEC TEC MGP_NODShiLtJ_T0018608.1 MGP_NODShiLtJ_G0015687.1 mouse_genomes_project 1 4074064 4111483 + MGP_NODShiLtJ_P0018608 Fam150a protein_coding protein_coding MGP_NODShiLtJ_T0022418.1 MGP_NODShiLtJ_G0016457.1 mouse_genomes_project 1 175943999 175975599 - MGP_NODShiLtJ_P0022418 Tsen15 protein_coding protein_coding MGP_NODShiLtJ_T0022419.1 MGP_NODShiLtJ_G0016457.1 mouse_genomes_project 1 175944102 175946481 - Tsen15 protein_coding retained_intron MGP_NODShiLtJ_T0022420.1 MGP_NODShiLtJ_G0016457.1 mouse_genomes_project 1 175944469 175975509 - MGP_NODShiLtJ_P0022420 Tsen15 protein_coding protein_coding MGP_NODShiLtJ_T0022421.1 MGP_NODShiLtJ_G0016457.1 mouse_genomes_project 1 175944476 175958921 - Tsen15 protein_coding retained_intron MGP_NODShiLtJ_T0022422.1 MGP_NODShiLtJ_G0016457.1 mouse_genomes_project 1 175958520 175975605 - Tsen15 protein_coding processed_transcript MGP_NODShiLtJ_T0022423.1 MGP_NODShiLtJ_G0016457.1 mouse_genomes_project 1 175960100 175975537 - Tsen15 protein_coding retained_intron MGP_NODShiLtJ_T0012114.1 MGP_NODShiLtJ_G0010222.1 mouse_genomes_project 1 147414950 147415372 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012144.1 MGP_NODShiLtJ_G0010252.1 mouse_genomes_project 1 165577381 165577786 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002864.1 MGP_NODShiLtJ_G0002694.1 mouse_genomes_project 1 174855833 174860275 - Gm10138 antisense antisense MGP_NODShiLtJ_T0002865.1 MGP_NODShiLtJ_G0002694.1 mouse_genomes_project 1 174858933 174861424 - Gm10138 antisense antisense MGP_NODShiLtJ_T0002866.1 MGP_NODShiLtJ_G0002694.1 mouse_genomes_project 1 174860561 174860929 - Gm10138 antisense pseudogene MGP_NODShiLtJ_T0098507.1 MGP_NODShiLtJ_G0036901.1 mouse_genomes_project 1 8441229 8441333 - Gm24674 snRNA snRNA MGP_NODShiLtJ_T0019252.1 MGP_NODShiLtJ_G0015812.1 mouse_genomes_project 1 41390147 41392414 - Lyg1 protein_coding processed_transcript MGP_NODShiLtJ_T0019253.1 MGP_NODShiLtJ_G0015812.1 mouse_genomes_project 1 41390147 41402049 - MGP_NODShiLtJ_P0019253 Lyg1 protein_coding protein_coding MGP_NODShiLtJ_T0019254.1 MGP_NODShiLtJ_G0015812.1 mouse_genomes_project 1 41390149 41402049 - MGP_NODShiLtJ_P0019254 Lyg1 protein_coding protein_coding MGP_NODShiLtJ_T0000699.1 MGP_NODShiLtJ_G0000633.1 mouse_genomes_project 1 185434107 185436594 + TEC TEC MGP_NODShiLtJ_T0005894.1 MGP_NODShiLtJ_G0004936.1 mouse_genomes_project 1 183226017 183238749 - 1600012P17Rik lincRNA lincRNA MGP_NODShiLtJ_T0005895.1 MGP_NODShiLtJ_G0004936.1 mouse_genomes_project 1 183227924 183238357 - 1600012P17Rik lincRNA lincRNA MGP_NODShiLtJ_T0023687.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207469357 207524218 + MGP_NODShiLtJ_P0023687 Lin9 protein_coding protein_coding MGP_NODShiLtJ_T0023688.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207469541 207524225 + MGP_NODShiLtJ_P0023688 Lin9 protein_coding protein_coding MGP_NODShiLtJ_T0023689.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207469560 207513013 + Lin9 protein_coding retained_intron MGP_NODShiLtJ_T0023690.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207469562 207477401 + Lin9 protein_coding processed_transcript MGP_NODShiLtJ_T0023691.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207469567 207524218 + MGP_NODShiLtJ_P0023691 Lin9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023692.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207469573 207503569 + Lin9 protein_coding retained_intron MGP_NODShiLtJ_T0023693.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207490434 207502621 + MGP_NODShiLtJ_P0023693 Lin9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023694.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207510846 207522455 + Lin9 protein_coding retained_intron MGP_NODShiLtJ_T0023695.1 MGP_NODShiLtJ_G0016740.1 mouse_genomes_project 1 207512273 207524218 + Lin9 protein_coding retained_intron MGP_NODShiLtJ_T0021425.1 MGP_NODShiLtJ_G0016244.1 mouse_genomes_project 1 121319767 121358616 - MGP_NODShiLtJ_P0021425 Kdsr protein_coding protein_coding MGP_NODShiLtJ_T0021426.1 MGP_NODShiLtJ_G0016244.1 mouse_genomes_project 1 121346546 121358588 - Kdsr protein_coding retained_intron MGP_NODShiLtJ_T0021427.1 MGP_NODShiLtJ_G0016244.1 mouse_genomes_project 1 121355990 121358572 - Kdsr protein_coding retained_intron MGP_NODShiLtJ_T0016862.1 MGP_NODShiLtJ_G0014962.1 mouse_genomes_project 1 39865237 39867204 + D430040D24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0016863.1 MGP_NODShiLtJ_G0014962.1 mouse_genomes_project 1 39865895 39873150 + D430040D24Rik processed_transcript antisense MGP_NODShiLtJ_T0005769.1 MGP_NODShiLtJ_G0004833.1 mouse_genomes_project 1 100654119 100705116 - C030007H22Rik lincRNA lincRNA MGP_NODShiLtJ_T0009377.1 MGP_NODShiLtJ_G0007510.1 mouse_genomes_project 1 11152122 11152243 + Mir6341 miRNA miRNA MGP_NODShiLtJ_T0002808.1 MGP_NODShiLtJ_G0002653.1 mouse_genomes_project 1 104343580 104350109 - Gm29480 antisense antisense MGP_NODShiLtJ_T0020015.1 MGP_NODShiLtJ_G0015954.1 mouse_genomes_project 1 70881943 70939896 + MGP_NODShiLtJ_P0020015 protein_coding protein_coding MGP_NODShiLtJ_T0020016.1 MGP_NODShiLtJ_G0015954.1 mouse_genomes_project 1 70881947 70917304 + MGP_NODShiLtJ_P0020016 protein_coding protein_coding MGP_NODShiLtJ_T0020017.1 MGP_NODShiLtJ_G0015954.1 mouse_genomes_project 1 70912187 70939895 + MGP_NODShiLtJ_P0020017 protein_coding protein_coding MGP_NODShiLtJ_T0005739.1 MGP_NODShiLtJ_G0004808.1 mouse_genomes_project 1 87611580 87642111 - Gm28387 lincRNA lincRNA MGP_NODShiLtJ_T0011871.1 MGP_NODShiLtJ_G0009979.1 mouse_genomes_project 1 48068393 48068573 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022947.1 MGP_NODShiLtJ_G0016557.1 mouse_genomes_project 1 189893098 189896982 - MGP_NODShiLtJ_P0022947 Xcl1 protein_coding protein_coding MGP_NODShiLtJ_T0023051.1 MGP_NODShiLtJ_G0016576.1 mouse_genomes_project 1 191518893 191532713 - MGP_NODShiLtJ_P0023051 Gm4846 protein_coding protein_coding MGP_NODShiLtJ_T0000693.1 MGP_NODShiLtJ_G0000627.1 mouse_genomes_project 1 185032961 185034194 - TEC TEC MGP_NODShiLtJ_T0000674.1 MGP_NODShiLtJ_G0000608.1 mouse_genomes_project 1 180199770 180200407 - TEC TEC MGP_NODShiLtJ_T0011731.1 MGP_NODShiLtJ_G0009839.1 mouse_genomes_project 1 387631 388111 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005891.1 MGP_NODShiLtJ_G0004934.1 mouse_genomes_project 1 179401073 179410081 - Gm5532 lincRNA lincRNA MGP_NODShiLtJ_T0005892.1 MGP_NODShiLtJ_G0004934.1 mouse_genomes_project 1 179406939 179410113 - Gm5532 lincRNA lincRNA MGP_NODShiLtJ_T0098522.1 MGP_NODShiLtJ_G0036916.1 mouse_genomes_project 1 53609086 53609207 - Gm23240 snRNA snRNA MGP_NODShiLtJ_T0101505.1 MGP_NODShiLtJ_G0039675.1 mouse_genomes_project 1 198692806 198693665 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009416.1 MGP_NODShiLtJ_G0007549.1 mouse_genomes_project 1 87132006 87132122 - Mir6352 miRNA miRNA MGP_NODShiLtJ_T0000562.1 MGP_NODShiLtJ_G0000498.1 mouse_genomes_project 1 110714953 110716637 - TEC TEC MGP_NODShiLtJ_T0000396.1 MGP_NODShiLtJ_G0000333.1 mouse_genomes_project 1 24481754 24484560 + TEC TEC MGP_NODShiLtJ_T0002880.1 MGP_NODShiLtJ_G0002708.1 mouse_genomes_project 1 185715034 185719792 - 4930469G21Rik antisense antisense MGP_NODShiLtJ_T0002881.1 MGP_NODShiLtJ_G0002708.1 mouse_genomes_project 1 185717319 185719792 - 4930469G21Rik antisense antisense MGP_NODShiLtJ_T0022252.1 MGP_NODShiLtJ_G0016423.1 mouse_genomes_project 1 159041970 159237659 - MGP_NODShiLtJ_P0022252 Crb1 protein_coding protein_coding MGP_NODShiLtJ_T0022253.1 MGP_NODShiLtJ_G0016423.1 mouse_genomes_project 1 159043160 159047175 - Crb1 protein_coding retained_intron MGP_NODShiLtJ_T0022254.1 MGP_NODShiLtJ_G0016423.1 mouse_genomes_project 1 159076575 159237682 - MGP_NODShiLtJ_P0022254 Crb1 protein_coding protein_coding MGP_NODShiLtJ_T0022255.1 MGP_NODShiLtJ_G0016423.1 mouse_genomes_project 1 159092528 159102815 - Crb1 protein_coding retained_intron MGP_NODShiLtJ_T0022256.1 MGP_NODShiLtJ_G0016423.1 mouse_genomes_project 1 159094575 159237623 - MGP_NODShiLtJ_P0022256 Crb1 protein_coding protein_coding MGP_NODShiLtJ_T0022257.1 MGP_NODShiLtJ_G0016423.1 mouse_genomes_project 1 159095652 159182574 - MGP_NODShiLtJ_P0022257 Crb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020811.1 MGP_NODShiLtJ_G0016106.1 mouse_genomes_project 1 96549136 96563525 + MGP_NODShiLtJ_P0020811 Itm2c protein_coding protein_coding MGP_NODShiLtJ_T0020812.1 MGP_NODShiLtJ_G0016106.1 mouse_genomes_project 1 96549474 96563209 + MGP_NODShiLtJ_P0020812 Itm2c protein_coding protein_coding MGP_NODShiLtJ_T0020813.1 MGP_NODShiLtJ_G0016106.1 mouse_genomes_project 1 96561010 96562641 + Itm2c protein_coding retained_intron MGP_NODShiLtJ_T0023269.1 MGP_NODShiLtJ_G0016629.1 mouse_genomes_project 1 196865638 196887031 + Arhgap30 protein_coding retained_intron MGP_NODShiLtJ_T0023270.1 MGP_NODShiLtJ_G0016629.1 mouse_genomes_project 1 196865638 196886973 + Arhgap30 protein_coding retained_intron MGP_NODShiLtJ_T0023271.1 MGP_NODShiLtJ_G0016629.1 mouse_genomes_project 1 196865638 196886973 + MGP_NODShiLtJ_P0023271 Arhgap30 protein_coding protein_coding MGP_NODShiLtJ_T0023272.1 MGP_NODShiLtJ_G0016629.1 mouse_genomes_project 1 196865683 196869500 + Arhgap30 protein_coding retained_intron MGP_NODShiLtJ_T0012232.1 MGP_NODShiLtJ_G0010340.1 mouse_genomes_project 1 209046118 209046535 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011751.1 MGP_NODShiLtJ_G0009859.1 mouse_genomes_project 1 4839813 4841116 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022826.1 MGP_NODShiLtJ_G0016529.1 mouse_genomes_project 1 187217907 187234230 - MGP_NODShiLtJ_P0022826 Mettl13 protein_coding protein_coding MGP_NODShiLtJ_T0022827.1 MGP_NODShiLtJ_G0016529.1 mouse_genomes_project 1 187219459 187234201 - MGP_NODShiLtJ_P0022827 Mettl13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022828.1 MGP_NODShiLtJ_G0016529.1 mouse_genomes_project 1 187221622 187230041 - MGP_NODShiLtJ_P0022828 Mettl13 protein_coding protein_coding MGP_NODShiLtJ_T0022829.1 MGP_NODShiLtJ_G0016529.1 mouse_genomes_project 1 187222923 187233935 - Mettl13 protein_coding processed_transcript MGP_NODShiLtJ_T0022830.1 MGP_NODShiLtJ_G0016529.1 mouse_genomes_project 1 187224700 187232206 - MGP_NODShiLtJ_P0022830 Mettl13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022831.1 MGP_NODShiLtJ_G0016529.1 mouse_genomes_project 1 187227229 187234217 - Mettl13 protein_coding retained_intron MGP_NODShiLtJ_T0022832.1 MGP_NODShiLtJ_G0016529.1 mouse_genomes_project 1 187229363 187234207 - Mettl13 protein_coding retained_intron MGP_NODShiLtJ_T0022833.1 MGP_NODShiLtJ_G0016529.1 mouse_genomes_project 1 187232506 187234208 - Mettl13 protein_coding retained_intron MGP_NODShiLtJ_T0011131.1 MGP_NODShiLtJ_G0009264.1 mouse_genomes_project 1 41421103 41421340 + Gm23409 misc_RNA misc_RNA MGP_NODShiLtJ_T0021799.1 MGP_NODShiLtJ_G0016328.1 mouse_genomes_project 1 150656730 150701316 + MGP_NODShiLtJ_P0021799 Ctse protein_coding protein_coding MGP_NODShiLtJ_T0021800.1 MGP_NODShiLtJ_G0016328.1 mouse_genomes_project 1 150656918 150701314 + MGP_NODShiLtJ_P0021800 Ctse protein_coding protein_coding MGP_NODShiLtJ_T0021801.1 MGP_NODShiLtJ_G0016328.1 mouse_genomes_project 1 150687726 150691262 + Ctse protein_coding retained_intron MGP_NODShiLtJ_T0019939.1 MGP_NODShiLtJ_G0015941.1 mouse_genomes_project 1 67620638 67654974 + Cyp20a1 protein_coding retained_intron MGP_NODShiLtJ_T0019940.1 MGP_NODShiLtJ_G0015941.1 mouse_genomes_project 1 67620638 67671032 + MGP_NODShiLtJ_P0019940 Cyp20a1 protein_coding protein_coding MGP_NODShiLtJ_T0019941.1 MGP_NODShiLtJ_G0015941.1 mouse_genomes_project 1 67620638 67671032 + MGP_NODShiLtJ_P0019941 Cyp20a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022508.1 MGP_NODShiLtJ_G0016476.1 mouse_genomes_project 1 177652962 177662738 + MGP_NODShiLtJ_P0022508 Glul protein_coding protein_coding MGP_NODShiLtJ_T0022509.1 MGP_NODShiLtJ_G0016476.1 mouse_genomes_project 1 177653624 177660155 + MGP_NODShiLtJ_P0022509 Glul protein_coding protein_coding MGP_NODShiLtJ_T0022510.1 MGP_NODShiLtJ_G0016476.1 mouse_genomes_project 1 177654134 177659371 + MGP_NODShiLtJ_P0022510 Glul protein_coding protein_coding MGP_NODShiLtJ_T0022511.1 MGP_NODShiLtJ_G0016476.1 mouse_genomes_project 1 177656812 177660044 + Glul protein_coding processed_transcript MGP_NODShiLtJ_T0022512.1 MGP_NODShiLtJ_G0016476.1 mouse_genomes_project 1 177659057 177660131 + Glul protein_coding retained_intron MGP_NODShiLtJ_T0020881.1 MGP_NODShiLtJ_G0016122.1 mouse_genomes_project 1 97390383 97395748 - MGP_NODShiLtJ_P0020881 Nppc protein_coding protein_coding MGP_NODShiLtJ_T0005637.1 MGP_NODShiLtJ_G0004739.1 mouse_genomes_project 1 46116120 46117503 + Gm9915 lincRNA lincRNA MGP_NODShiLtJ_T0005638.1 MGP_NODShiLtJ_G0004739.1 mouse_genomes_project 1 46116121 46117503 + Gm9915 lincRNA lincRNA MGP_NODShiLtJ_T0005889.1 MGP_NODShiLtJ_G0004932.1 mouse_genomes_project 1 178841803 178894071 - Gm29282 lincRNA lincRNA MGP_NODShiLtJ_T0023096.1 MGP_NODShiLtJ_G0016590.1 mouse_genomes_project 1 194983713 194989928 - MGP_NODShiLtJ_P0023096 Rgs4 protein_coding protein_coding MGP_NODShiLtJ_T0023097.1 MGP_NODShiLtJ_G0016590.1 mouse_genomes_project 1 194983718 194989928 - MGP_NODShiLtJ_P0023097 Rgs4 protein_coding protein_coding MGP_NODShiLtJ_T0023098.1 MGP_NODShiLtJ_G0016590.1 mouse_genomes_project 1 194986071 194989909 - Rgs4 protein_coding retained_intron MGP_NODShiLtJ_T0005601.1 MGP_NODShiLtJ_G0004709.1 mouse_genomes_project 1 20776990 20778814 - 6720483E21Rik lincRNA lincRNA MGP_NODShiLtJ_T0009417.1 MGP_NODShiLtJ_G0007550.1 mouse_genomes_project 1 92422081 92422185 + Mir6344 miRNA miRNA MGP_NODShiLtJ_T0009440.1 MGP_NODShiLtJ_G0007573.1 mouse_genomes_project 1 151317732 151317829 + Mir135b miRNA miRNA MGP_NODShiLtJ_T0022306.1 MGP_NODShiLtJ_G0016437.1 mouse_genomes_project 1 165230996 165235818 - MGP_NODShiLtJ_P0022306 Rgs2 protein_coding protein_coding MGP_NODShiLtJ_T0022307.1 MGP_NODShiLtJ_G0016437.1 mouse_genomes_project 1 165233338 165235792 - MGP_NODShiLtJ_P0022307 Rgs2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022308.1 MGP_NODShiLtJ_G0016437.1 mouse_genomes_project 1 165233541 165235689 - MGP_NODShiLtJ_P0022308 Rgs2 protein_coding protein_coding MGP_NODShiLtJ_T0022309.1 MGP_NODShiLtJ_G0016437.1 mouse_genomes_project 1 165234175 165235778 - Rgs2 protein_coding retained_intron MGP_NODShiLtJ_T0098509.1 MGP_NODShiLtJ_G0036903.1 mouse_genomes_project 1 11099781 11099888 + Gm22633 snRNA snRNA MGP_NODShiLtJ_T0002848.1 MGP_NODShiLtJ_G0002680.1 mouse_genomes_project 1 154219837 154232135 + Gm28892 antisense antisense MGP_NODShiLtJ_T0012074.1 MGP_NODShiLtJ_G0010182.1 mouse_genomes_project 1 128995963 128996632 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011930.1 MGP_NODShiLtJ_G0010038.1 mouse_genomes_project 1 65796291 65797973 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005758.1 MGP_NODShiLtJ_G0004823.1 mouse_genomes_project 1 97927058 97927821 + lincRNA lincRNA MGP_NODShiLtJ_T0002699.1 MGP_NODShiLtJ_G0002572.1 mouse_genomes_project 1 2423543 2438027 + antisense antisense MGP_NODShiLtJ_T0101509.1 MGP_NODShiLtJ_G0039679.1 mouse_genomes_project 1 199549271 199552378 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0021746.1 MGP_NODShiLtJ_G0016315.1 mouse_genomes_project 1 149830605 149847571 + MGP_NODShiLtJ_P0021746 Fcmr protein_coding protein_coding MGP_NODShiLtJ_T0021747.1 MGP_NODShiLtJ_G0016315.1 mouse_genomes_project 1 149830716 149842020 + Fcmr protein_coding processed_transcript MGP_NODShiLtJ_T0021748.1 MGP_NODShiLtJ_G0016315.1 mouse_genomes_project 1 149845057 149847559 + Fcmr protein_coding processed_transcript MGP_NODShiLtJ_T0021749.1 MGP_NODShiLtJ_G0016315.1 mouse_genomes_project 1 149845230 149847570 + Fcmr protein_coding processed_transcript MGP_NODShiLtJ_T0011763.1 MGP_NODShiLtJ_G0009871.1 mouse_genomes_project 1 7710912 7712828 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005919.1 MGP_NODShiLtJ_G0004954.1 mouse_genomes_project 1 190739185 190740428 + Gm37073 lincRNA lincRNA MGP_NODShiLtJ_T0000677.1 MGP_NODShiLtJ_G0000611.1 mouse_genomes_project 1 180616047 180616447 + TEC TEC MGP_NODShiLtJ_T0016859.1 MGP_NODShiLtJ_G0014961.1 mouse_genomes_project 1 37555205 37556614 - processed_transcript retained_intron MGP_NODShiLtJ_T0016860.1 MGP_NODShiLtJ_G0014961.1 mouse_genomes_project 1 37556336 37567499 - processed_transcript antisense MGP_NODShiLtJ_T0016861.1 MGP_NODShiLtJ_G0014961.1 mouse_genomes_project 1 37565871 37567463 - processed_transcript antisense MGP_NODShiLtJ_T0000440.1 MGP_NODShiLtJ_G0000376.1 mouse_genomes_project 1 40906797 40909551 - TEC TEC MGP_NODShiLtJ_T0005824.1 MGP_NODShiLtJ_G0004880.1 mouse_genomes_project 1 138554262 138555597 + Gm29347 lincRNA lincRNA MGP_NODShiLtJ_T0020757.1 MGP_NODShiLtJ_G0016093.1 mouse_genomes_project 1 94892959 95231760 - MGP_NODShiLtJ_P0020757 Dner protein_coding protein_coding MGP_NODShiLtJ_T0020758.1 MGP_NODShiLtJ_G0016093.1 mouse_genomes_project 1 95054416 95231558 - Dner protein_coding retained_intron MGP_NODShiLtJ_T0020759.1 MGP_NODShiLtJ_G0016093.1 mouse_genomes_project 1 95094869 95162862 - MGP_NODShiLtJ_P0020759 Dner protein_coding protein_coding MGP_NODShiLtJ_T0020760.1 MGP_NODShiLtJ_G0016093.1 mouse_genomes_project 1 95097158 95141524 - MGP_NODShiLtJ_P0020760 Dner protein_coding protein_coding MGP_NODShiLtJ_T0099795.1 MGP_NODShiLtJ_G0038189.1 mouse_genomes_project 1 147132205 147132339 + Gm23902 snoRNA snoRNA MGP_NODShiLtJ_T0012045.1 MGP_NODShiLtJ_G0010153.1 mouse_genomes_project 1 118621704 118622011 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009422.1 MGP_NODShiLtJ_G0007555.1 mouse_genomes_project 1 96390535 96390613 + Gm25472 miRNA miRNA MGP_NODShiLtJ_T0005984.1 MGP_NODShiLtJ_G0005005.1 mouse_genomes_project 1 215612608 215624774 + Gm38064 lincRNA lincRNA MGP_NODShiLtJ_T0019405.1 MGP_NODShiLtJ_G0015846.1 mouse_genomes_project 1 47458856 47550059 + MGP_NODShiLtJ_P0019405 Nck2 protein_coding protein_coding MGP_NODShiLtJ_T0019406.1 MGP_NODShiLtJ_G0015846.1 mouse_genomes_project 1 47460028 47478047 + Nck2 protein_coding processed_transcript MGP_NODShiLtJ_T0019407.1 MGP_NODShiLtJ_G0015846.1 mouse_genomes_project 1 47460028 47588024 + MGP_NODShiLtJ_P0019407 Nck2 protein_coding protein_coding MGP_NODShiLtJ_T0019408.1 MGP_NODShiLtJ_G0015846.1 mouse_genomes_project 1 47472456 47478075 + Nck2 protein_coding processed_transcript MGP_NODShiLtJ_T0019409.1 MGP_NODShiLtJ_G0015846.1 mouse_genomes_project 1 47548829 47571580 + MGP_NODShiLtJ_P0019409 Nck2 protein_coding protein_coding MGP_NODShiLtJ_T0019410.1 MGP_NODShiLtJ_G0015846.1 mouse_genomes_project 1 47549995 47586851 + MGP_NODShiLtJ_P0019410 Nck2 protein_coding protein_coding MGP_NODShiLtJ_T0023089.1 MGP_NODShiLtJ_G0016588.1 mouse_genomes_project 1 194715486 194751905 - MGP_NODShiLtJ_P0023089 Nuf2 protein_coding protein_coding MGP_NODShiLtJ_T0023090.1 MGP_NODShiLtJ_G0016588.1 mouse_genomes_project 1 194715862 194751869 - MGP_NODShiLtJ_P0023090 Nuf2 protein_coding protein_coding MGP_NODShiLtJ_T0023091.1 MGP_NODShiLtJ_G0016588.1 mouse_genomes_project 1 194723893 194741418 - MGP_NODShiLtJ_P0023091 Nuf2 protein_coding protein_coding MGP_NODShiLtJ_T0023092.1 MGP_NODShiLtJ_G0016588.1 mouse_genomes_project 1 194729457 194751852 - MGP_NODShiLtJ_P0023092 Nuf2 protein_coding protein_coding MGP_NODShiLtJ_T0023093.1 MGP_NODShiLtJ_G0016588.1 mouse_genomes_project 1 194744057 194751859 - Nuf2 protein_coding retained_intron MGP_NODShiLtJ_T0020227.1 MGP_NODShiLtJ_G0015996.1 mouse_genomes_project 1 81565717 81586557 + MGP_NODShiLtJ_P0020227 Tmem169 protein_coding protein_coding MGP_NODShiLtJ_T0020228.1 MGP_NODShiLtJ_G0015996.1 mouse_genomes_project 1 81565743 81584226 + MGP_NODShiLtJ_P0020228 Tmem169 protein_coding protein_coding MGP_NODShiLtJ_T0099755.1 MGP_NODShiLtJ_G0038149.1 mouse_genomes_project 1 50134284 50134415 + Gm23974 snoRNA snoRNA MGP_NODShiLtJ_T0009446.1 MGP_NODShiLtJ_G0007579.1 mouse_genomes_project 1 157687787 157687867 + Mir181b-1 miRNA miRNA MGP_NODShiLtJ_T0020694.1 MGP_NODShiLtJ_G0016080.1 mouse_genomes_project 1 92527602 92530424 + MGP_NODShiLtJ_P0020694 Gm9747 protein_coding protein_coding MGP_NODShiLtJ_T0012015.1 MGP_NODShiLtJ_G0010123.1 mouse_genomes_project 1 98948749 98951530 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021183.1 MGP_NODShiLtJ_G0016188.1 mouse_genomes_project 1 104055971 104057859 + MGP_NODShiLtJ_P0021183 Olfr1413 protein_coding protein_coding MGP_NODShiLtJ_T0000483.1 MGP_NODShiLtJ_G0000419.1 mouse_genomes_project 1 69257501 69258421 + TEC TEC MGP_NODShiLtJ_T0011988.1 MGP_NODShiLtJ_G0010096.1 mouse_genomes_project 1 87209233 87209525 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018961.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33245504 33318119 - MGP_NODShiLtJ_P0018961 Phf3 protein_coding protein_coding MGP_NODShiLtJ_T0018962.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33245507 33306367 - MGP_NODShiLtJ_P0018962 Phf3 protein_coding protein_coding MGP_NODShiLtJ_T0018963.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33246711 33259259 - MGP_NODShiLtJ_P0018963 Phf3 protein_coding protein_coding MGP_NODShiLtJ_T0018964.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33249355 33252169 - Phf3 protein_coding retained_intron MGP_NODShiLtJ_T0018965.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33260450 33262081 - Phf3 protein_coding retained_intron MGP_NODShiLtJ_T0018966.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33262110 33318229 - Phf3 protein_coding retained_intron MGP_NODShiLtJ_T0018967.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33263833 33318461 - Phf3 protein_coding retained_intron MGP_NODShiLtJ_T0018968.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33268723 33318338 - MGP_NODShiLtJ_P0018968 Phf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018969.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33269554 33272358 - Phf3 protein_coding retained_intron MGP_NODShiLtJ_T0018970.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33272931 33306181 - Phf3 protein_coding processed_transcript MGP_NODShiLtJ_T0018971.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33277926 33279241 - Phf3 protein_coding retained_intron MGP_NODShiLtJ_T0018972.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33279702 33318434 - MGP_NODShiLtJ_P0018972 Phf3 protein_coding protein_coding MGP_NODShiLtJ_T0018973.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33306180 33317786 - MGP_NODShiLtJ_P0018973 Phf3 protein_coding protein_coding MGP_NODShiLtJ_T0018974.1 MGP_NODShiLtJ_G0015761.1 mouse_genomes_project 1 33317188 33318009 - Phf3 protein_coding retained_intron MGP_NODShiLtJ_T0000777.1 MGP_NODShiLtJ_G0000709.1 mouse_genomes_project 1 220522826 220524923 - TEC TEC MGP_NODShiLtJ_T0000778.1 MGP_NODShiLtJ_G0000709.1 mouse_genomes_project 1 220522877 220524428 - TEC TEC MGP_NODShiLtJ_T0021774.1 MGP_NODShiLtJ_G0016323.1 mouse_genomes_project 1 150174066 150197412 - MGP_NODShiLtJ_P0021774 Rassf5 protein_coding protein_coding MGP_NODShiLtJ_T0021775.1 MGP_NODShiLtJ_G0016323.1 mouse_genomes_project 1 150176181 150244906 - MGP_NODShiLtJ_P0021775 Rassf5 protein_coding protein_coding MGP_NODShiLtJ_T0021776.1 MGP_NODShiLtJ_G0016323.1 mouse_genomes_project 1 150206005 150245034 - Rassf5 protein_coding processed_transcript MGP_NODShiLtJ_T0101466.1 MGP_NODShiLtJ_G0039636.1 mouse_genomes_project 1 21328299 21329581 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005869.1 MGP_NODShiLtJ_G0004916.1 mouse_genomes_project 1 159243337 159270276 + 4933436E23Rik lincRNA lincRNA MGP_NODShiLtJ_T0020079.1 MGP_NODShiLtJ_G0015971.1 mouse_genomes_project 1 72883022 72885396 - Cryga protein_coding retained_intron MGP_NODShiLtJ_T0020080.1 MGP_NODShiLtJ_G0015971.1 mouse_genomes_project 1 72883022 72885409 - MGP_NODShiLtJ_P0020080 Cryga protein_coding protein_coding MGP_NODShiLtJ_T0024173.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223047358 223094912 - MGP_NODShiLtJ_P0024173 Cr2 protein_coding protein_coding MGP_NODShiLtJ_T0024174.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223047358 223094913 - MGP_NODShiLtJ_P0024174 Cr2 protein_coding protein_coding MGP_NODShiLtJ_T0024175.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223047364 223072260 - MGP_NODShiLtJ_P0024175 Cr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024176.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223050875 223066746 - Cr2 protein_coding retained_intron MGP_NODShiLtJ_T0024177.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223051219 223064080 - MGP_NODShiLtJ_P0024177 Cr2 protein_coding protein_coding MGP_NODShiLtJ_T0024178.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223051239 223094845 - MGP_NODShiLtJ_P0024178 Cr2 protein_coding protein_coding MGP_NODShiLtJ_T0024179.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223052326 223094807 - MGP_NODShiLtJ_P0024179 Cr2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024180.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223075899 223082627 - Cr2 protein_coding processed_transcript MGP_NODShiLtJ_T0024181.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223078446 223085429 - MGP_NODShiLtJ_P0024181 Cr2 protein_coding protein_coding MGP_NODShiLtJ_T0024182.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223078533 223094912 - Cr2 protein_coding processed_transcript MGP_NODShiLtJ_T0024183.1 MGP_NODShiLtJ_G0016838.1 mouse_genomes_project 1 223084905 223094912 - Cr2 protein_coding processed_transcript MGP_NODShiLtJ_T0000449.1 MGP_NODShiLtJ_G0000385.1 mouse_genomes_project 1 46394081 46397932 + TEC TEC MGP_NODShiLtJ_T0011829.1 MGP_NODShiLtJ_G0009937.1 mouse_genomes_project 1 33773894 33774458 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011959.1 MGP_NODShiLtJ_G0010067.1 mouse_genomes_project 1 72172155 72172373 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020081.1 MGP_NODShiLtJ_G0015972.1 mouse_genomes_project 1 72883252 72903489 - MGP_NODShiLtJ_P0020081 Gm28845 protein_coding protein_coding MGP_NODShiLtJ_T0011741.1 MGP_NODShiLtJ_G0009849.1 mouse_genomes_project 1 2540240 2541828 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021784.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150288629 150539683 - MGP_NODShiLtJ_P0021784 Srgap2 protein_coding protein_coding MGP_NODShiLtJ_T0021785.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150292736 150303832 - MGP_NODShiLtJ_P0021785 Srgap2 protein_coding protein_coding MGP_NODShiLtJ_T0021786.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150298366 150336974 - Srgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0021787.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150298596 150539683 - MGP_NODShiLtJ_P0021787 Srgap2 protein_coding protein_coding MGP_NODShiLtJ_T0021788.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150298597 150313175 - Srgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0021789.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150298599 150348399 - MGP_NODShiLtJ_P0021789 Srgap2 protein_coding protein_coding MGP_NODShiLtJ_T0021790.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150299134 150299759 - Srgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0021791.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150300019 150368781 - MGP_NODShiLtJ_P0021791 Srgap2 protein_coding protein_coding MGP_NODShiLtJ_T0021792.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150322262 150336167 - Srgap2 protein_coding retained_intron MGP_NODShiLtJ_T0021793.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150366742 150539688 - Srgap2 protein_coding retained_intron MGP_NODShiLtJ_T0021794.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150419724 150526029 - MGP_NODShiLtJ_P0021794 Srgap2 protein_coding protein_coding MGP_NODShiLtJ_T0021795.1 MGP_NODShiLtJ_G0016325.1 mouse_genomes_project 1 150444584 150513841 - MGP_NODShiLtJ_P0021795 Srgap2 protein_coding protein_coding MGP_NODShiLtJ_T0019196.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40713680 40764548 + Inpp4a protein_coding processed_transcript MGP_NODShiLtJ_T0019197.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40713706 40827194 + MGP_NODShiLtJ_P0019197 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019198.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40713708 40716582 + Inpp4a protein_coding retained_intron MGP_NODShiLtJ_T0019199.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40713730 40816065 + MGP_NODShiLtJ_P0019199 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019200.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40714123 40824790 + MGP_NODShiLtJ_P0019200 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019201.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40714123 40825234 + MGP_NODShiLtJ_P0019201 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019202.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40773441 40820189 + MGP_NODShiLtJ_P0019202 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019203.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40773441 40824970 + MGP_NODShiLtJ_P0019203 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019204.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40773963 40824760 + MGP_NODShiLtJ_P0019204 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019205.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40785256 40820941 + MGP_NODShiLtJ_P0019205 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019206.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40785256 40820933 + MGP_NODShiLtJ_P0019206 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019207.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40785260 40820938 + MGP_NODShiLtJ_P0019207 Inpp4a protein_coding protein_coding MGP_NODShiLtJ_T0019208.1 MGP_NODShiLtJ_G0015802.1 mouse_genomes_project 1 40794400 40796804 + Inpp4a protein_coding retained_intron MGP_NODShiLtJ_T0005999.1 MGP_NODShiLtJ_G0005018.1 mouse_genomes_project 1 222020413 222031013 - 4930503O07Rik lincRNA lincRNA MGP_NODShiLtJ_T0012161.1 MGP_NODShiLtJ_G0010269.1 mouse_genomes_project 1 174583404 174584329 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022942.1 MGP_NODShiLtJ_G0016555.1 mouse_genomes_project 1 189325396 189348503 - MGP_NODShiLtJ_P0022942 Atp1b1 protein_coding protein_coding MGP_NODShiLtJ_T0022943.1 MGP_NODShiLtJ_G0016555.1 mouse_genomes_project 1 189329795 189333969 - Atp1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0022944.1 MGP_NODShiLtJ_G0016555.1 mouse_genomes_project 1 189329795 189343927 - MGP_NODShiLtJ_P0022944 Atp1b1 protein_coding protein_coding MGP_NODShiLtJ_T0022945.1 MGP_NODShiLtJ_G0016555.1 mouse_genomes_project 1 189343411 189348170 - Atp1b1 protein_coding retained_intron MGP_NODShiLtJ_T0022527.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 178999418 179050922 + MGP_NODShiLtJ_P0022527 Stx6 protein_coding protein_coding MGP_NODShiLtJ_T0022528.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 178999422 179046606 + MGP_NODShiLtJ_P0022528 Stx6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022529.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 178999451 179042917 + MGP_NODShiLtJ_P0022529 Stx6 protein_coding protein_coding MGP_NODShiLtJ_T0022530.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 178999474 179036195 + Stx6 protein_coding processed_transcript MGP_NODShiLtJ_T0022531.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 178999502 179022464 + Stx6 protein_coding retained_intron MGP_NODShiLtJ_T0022532.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 179022361 179057683 + MGP_NODShiLtJ_P0022532 Stx6 protein_coding protein_coding MGP_NODShiLtJ_T0022533.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 179028961 179033020 + Stx6 protein_coding retained_intron MGP_NODShiLtJ_T0022534.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 179032063 179046684 + Stx6 protein_coding retained_intron MGP_NODShiLtJ_T0022535.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 179032507 179038436 + Stx6 protein_coding retained_intron MGP_NODShiLtJ_T0022536.1 MGP_NODShiLtJ_G0016481.1 mouse_genomes_project 1 179039694 179046909 + Stx6 protein_coding processed_transcript MGP_NODShiLtJ_T0011740.1 MGP_NODShiLtJ_G0009848.1 mouse_genomes_project 1 2360314 2360586 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012040.1 MGP_NODShiLtJ_G0010148.1 mouse_genomes_project 1 114859403 114859851 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019680.1 MGP_NODShiLtJ_G0015896.1 mouse_genomes_project 1 61788638 61791815 + MGP_NODShiLtJ_P0019680 Hspe1 protein_coding protein_coding MGP_NODShiLtJ_T0019681.1 MGP_NODShiLtJ_G0015896.1 mouse_genomes_project 1 61788820 61790423 + Hspe1 protein_coding retained_intron MGP_NODShiLtJ_T0023783.1 MGP_NODShiLtJ_G0016761.1 mouse_genomes_project 1 209254280 209261320 - MGP_NODShiLtJ_P0023783 Degs1 protein_coding protein_coding MGP_NODShiLtJ_T0023784.1 MGP_NODShiLtJ_G0016761.1 mouse_genomes_project 1 209257000 209261320 - Degs1 protein_coding retained_intron MGP_NODShiLtJ_T0023785.1 MGP_NODShiLtJ_G0016761.1 mouse_genomes_project 1 209257535 209260740 - MGP_NODShiLtJ_P0023785 Degs1 protein_coding protein_coding MGP_NODShiLtJ_T0022000.1 MGP_NODShiLtJ_G0016372.1 mouse_genomes_project 1 153513224 153521018 + MGP_NODShiLtJ_P0022000 Mybph protein_coding protein_coding MGP_NODShiLtJ_T0022001.1 MGP_NODShiLtJ_G0016372.1 mouse_genomes_project 1 153513233 153521019 + MGP_NODShiLtJ_P0022001 Mybph protein_coding protein_coding MGP_NODShiLtJ_T0101482.1 MGP_NODShiLtJ_G0039652.1 mouse_genomes_project 1 99152605 99152856 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002768.1 MGP_NODShiLtJ_G0002623.1 mouse_genomes_project 1 66691532 66693949 - 1700122D07Rik antisense antisense MGP_NODShiLtJ_T0005854.1 MGP_NODShiLtJ_G0004906.1 mouse_genomes_project 1 156138902 156141338 - 4933409D19Rik lincRNA lincRNA MGP_NODShiLtJ_T0023953.1 MGP_NODShiLtJ_G0016797.1 mouse_genomes_project 1 217115406 217168406 - MGP_NODShiLtJ_P0023953 Cenpf protein_coding protein_coding MGP_NODShiLtJ_T0023954.1 MGP_NODShiLtJ_G0016797.1 mouse_genomes_project 1 217117494 217123655 - MGP_NODShiLtJ_P0023954 Cenpf protein_coding protein_coding MGP_NODShiLtJ_T0023955.1 MGP_NODShiLtJ_G0016797.1 mouse_genomes_project 1 217135944 217168406 - MGP_NODShiLtJ_P0023955 Cenpf protein_coding protein_coding MGP_NODShiLtJ_T0023956.1 MGP_NODShiLtJ_G0016797.1 mouse_genomes_project 1 217146957 217150346 - Cenpf protein_coding retained_intron MGP_NODShiLtJ_T0023957.1 MGP_NODShiLtJ_G0016797.1 mouse_genomes_project 1 217164144 217168355 - MGP_NODShiLtJ_P0023957 Cenpf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023958.1 MGP_NODShiLtJ_G0016797.1 mouse_genomes_project 1 217167379 217168406 - Cenpf protein_coding retained_intron MGP_NODShiLtJ_T0000509.1 MGP_NODShiLtJ_G0000445.1 mouse_genomes_project 1 84444241 84445813 + TEC TEC MGP_NODShiLtJ_T0021761.1 MGP_NODShiLtJ_G0016320.1 mouse_genomes_project 1 150034466 150079275 - MGP_NODShiLtJ_P0021761 Mapkapk2 protein_coding protein_coding MGP_NODShiLtJ_T0021762.1 MGP_NODShiLtJ_G0016320.1 mouse_genomes_project 1 150037655 150053895 - MGP_NODShiLtJ_P0021762 Mapkapk2 protein_coding protein_coding MGP_NODShiLtJ_T0012009.1 MGP_NODShiLtJ_G0010117.1 mouse_genomes_project 1 97007698 97008025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019285.1 MGP_NODShiLtJ_G0015817.1 mouse_genomes_project 1 42286710 42329449 - MGP_NODShiLtJ_P0019285 Lonrf2 protein_coding protein_coding MGP_NODShiLtJ_T0019286.1 MGP_NODShiLtJ_G0015817.1 mouse_genomes_project 1 42287503 42314063 - MGP_NODShiLtJ_P0019286 Lonrf2 protein_coding protein_coding MGP_NODShiLtJ_T0019287.1 MGP_NODShiLtJ_G0015817.1 mouse_genomes_project 1 42327920 42329098 - Lonrf2 protein_coding retained_intron MGP_NODShiLtJ_T0021363.1 MGP_NODShiLtJ_G0016232.1 mouse_genomes_project 1 110605578 110629413 + MGP_NODShiLtJ_P0021363 Gin1 protein_coding protein_coding MGP_NODShiLtJ_T0021364.1 MGP_NODShiLtJ_G0016232.1 mouse_genomes_project 1 110605585 110614615 + MGP_NODShiLtJ_P0021364 Gin1 protein_coding protein_coding MGP_NODShiLtJ_T0021365.1 MGP_NODShiLtJ_G0016232.1 mouse_genomes_project 1 110605603 110630153 + MGP_NODShiLtJ_P0021365 Gin1 protein_coding protein_coding MGP_NODShiLtJ_T0021366.1 MGP_NODShiLtJ_G0016232.1 mouse_genomes_project 1 110605607 110606411 + Gin1 protein_coding processed_transcript MGP_NODShiLtJ_T0021367.1 MGP_NODShiLtJ_G0016232.1 mouse_genomes_project 1 110605616 110629450 + MGP_NODShiLtJ_P0021367 Gin1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021368.1 MGP_NODShiLtJ_G0016232.1 mouse_genomes_project 1 110609164 110612508 + Gin1 protein_coding retained_intron MGP_NODShiLtJ_T0021369.1 MGP_NODShiLtJ_G0016232.1 mouse_genomes_project 1 110613862 110618629 + MGP_NODShiLtJ_P0021369 Gin1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0012209.1 MGP_NODShiLtJ_G0010317.1 mouse_genomes_project 1 194864459 194865024 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005870.1 MGP_NODShiLtJ_G0004917.1 mouse_genomes_project 1 159277122 159282835 + Gm34816 lincRNA lincRNA MGP_NODShiLtJ_T0002750.1 MGP_NODShiLtJ_G0002609.1 mouse_genomes_project 1 47067156 47068404 + 8430432A02Rik antisense antisense MGP_NODShiLtJ_T0023833.1 MGP_NODShiLtJ_G0016772.1 mouse_genomes_project 1 210323101 210343222 - MGP_NODShiLtJ_P0023833 protein_coding protein_coding MGP_NODShiLtJ_T0023834.1 MGP_NODShiLtJ_G0016772.1 mouse_genomes_project 1 210323203 210330963 - MGP_NODShiLtJ_P0023834 protein_coding protein_coding MGP_NODShiLtJ_T0023835.1 MGP_NODShiLtJ_G0016772.1 mouse_genomes_project 1 210323716 210367586 - MGP_NODShiLtJ_P0023835 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023836.1 MGP_NODShiLtJ_G0016772.1 mouse_genomes_project 1 210331948 210335571 - MGP_NODShiLtJ_P0023836 protein_coding protein_coding MGP_NODShiLtJ_T0023837.1 MGP_NODShiLtJ_G0016772.1 mouse_genomes_project 1 210341657 210349034 - protein_coding retained_intron MGP_NODShiLtJ_T0023838.1 MGP_NODShiLtJ_G0016772.1 mouse_genomes_project 1 210342153 210349012 - MGP_NODShiLtJ_P0023838 protein_coding protein_coding MGP_NODShiLtJ_T0023839.1 MGP_NODShiLtJ_G0016772.1 mouse_genomes_project 1 210356391 210367610 - MGP_NODShiLtJ_P0023839 protein_coding protein_coding MGP_NODShiLtJ_T0022158.1 MGP_NODShiLtJ_G0016404.1 mouse_genomes_project 1 155437054 155447606 - MGP_NODShiLtJ_P0022158 Igfn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022159.1 MGP_NODShiLtJ_G0016404.1 mouse_genomes_project 1 155437061 155491667 - MGP_NODShiLtJ_P0022159 Igfn1 protein_coding protein_coding MGP_NODShiLtJ_T0022160.1 MGP_NODShiLtJ_G0016404.1 mouse_genomes_project 1 155437500 155469899 - MGP_NODShiLtJ_P0022160 Igfn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022161.1 MGP_NODShiLtJ_G0016404.1 mouse_genomes_project 1 155438074 155468103 - MGP_NODShiLtJ_P0022161 Igfn1 protein_coding protein_coding MGP_NODShiLtJ_T0022364.1 MGP_NODShiLtJ_G0016448.1 mouse_genomes_project 1 173836895 173853962 - MGP_NODShiLtJ_P0022364 Prg4 protein_coding protein_coding MGP_NODShiLtJ_T0022365.1 MGP_NODShiLtJ_G0016448.1 mouse_genomes_project 1 173837261 173853962 - MGP_NODShiLtJ_P0022365 Prg4 protein_coding protein_coding MGP_NODShiLtJ_T0022366.1 MGP_NODShiLtJ_G0016448.1 mouse_genomes_project 1 173837261 173853962 - MGP_NODShiLtJ_P0022366 Prg4 protein_coding protein_coding MGP_NODShiLtJ_T0022367.1 MGP_NODShiLtJ_G0016448.1 mouse_genomes_project 1 173837665 173854529 - MGP_NODShiLtJ_P0022367 Prg4 protein_coding protein_coding MGP_NODShiLtJ_T0022368.1 MGP_NODShiLtJ_G0016448.1 mouse_genomes_project 1 173844360 173854529 - MGP_NODShiLtJ_P0022368 Prg4 protein_coding protein_coding MGP_NODShiLtJ_T0022369.1 MGP_NODShiLtJ_G0016448.1 mouse_genomes_project 1 173846555 173854529 - MGP_NODShiLtJ_P0022369 Prg4 protein_coding protein_coding MGP_NODShiLtJ_T0016885.1 MGP_NODShiLtJ_G0014973.1 mouse_genomes_project 1 84600927 84615582 - Gm29253 processed_transcript processed_transcript MGP_NODShiLtJ_T0002912.1 MGP_NODShiLtJ_G0002732.1 mouse_genomes_project 1 203039580 203048785 + antisense antisense MGP_NODShiLtJ_T0000545.1 MGP_NODShiLtJ_G0000481.1 mouse_genomes_project 1 98781567 98782388 + TEC TEC MGP_NODShiLtJ_T0005946.1 MGP_NODShiLtJ_G0004979.1 mouse_genomes_project 1 208126747 208129260 + A430110L20Rik lincRNA lincRNA MGP_NODShiLtJ_T0005947.1 MGP_NODShiLtJ_G0004979.1 mouse_genomes_project 1 208126837 208129252 + A430110L20Rik lincRNA lincRNA MGP_NODShiLtJ_T0005703.1 MGP_NODShiLtJ_G0004783.1 mouse_genomes_project 1 72357325 72365574 + Gm28982 lincRNA lincRNA MGP_NODShiLtJ_T0019378.1 MGP_NODShiLtJ_G0015838.1 mouse_genomes_project 1 44423791 44443588 - MGP_NODShiLtJ_P0019378 Mfsd9 protein_coding protein_coding MGP_NODShiLtJ_T0019379.1 MGP_NODShiLtJ_G0015838.1 mouse_genomes_project 1 44423794 44443612 - MGP_NODShiLtJ_P0019379 Mfsd9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019380.1 MGP_NODShiLtJ_G0015838.1 mouse_genomes_project 1 44432913 44443582 - Mfsd9 protein_coding retained_intron MGP_NODShiLtJ_T0011835.1 MGP_NODShiLtJ_G0009943.1 mouse_genomes_project 1 36306196 36307107 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020838.1 MGP_NODShiLtJ_G0016112.1 mouse_genomes_project 1 96768016 96781152 - MGP_NODShiLtJ_P0020838 Htr2b protein_coding protein_coding MGP_NODShiLtJ_T0020839.1 MGP_NODShiLtJ_G0016112.1 mouse_genomes_project 1 96769091 96779854 - MGP_NODShiLtJ_P0020839 Htr2b protein_coding protein_coding MGP_NODShiLtJ_T0005902.1 MGP_NODShiLtJ_G0004941.1 mouse_genomes_project 1 185351913 185352377 + Gm38060 lincRNA lincRNA MGP_NODShiLtJ_T0012140.1 MGP_NODShiLtJ_G0010248.1 mouse_genomes_project 1 163761668 163761963 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009437.1 MGP_NODShiLtJ_G0007570.1 mouse_genomes_project 1 136447278 136447359 + Mir6346 miRNA miRNA MGP_NODShiLtJ_T0012162.1 MGP_NODShiLtJ_G0010270.1 mouse_genomes_project 1 174619171 174620445 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099803.1 MGP_NODShiLtJ_G0038197.1 mouse_genomes_project 1 166829838 166829965 - Gm25460 snoRNA snoRNA MGP_NODShiLtJ_T0021777.1 MGP_NODShiLtJ_G0016324.1 mouse_genomes_project 1 150254118 150265892 - Ikbke protein_coding retained_intron MGP_NODShiLtJ_T0021778.1 MGP_NODShiLtJ_G0016324.1 mouse_genomes_project 1 150254372 150282028 - MGP_NODShiLtJ_P0021778 Ikbke protein_coding protein_coding MGP_NODShiLtJ_T0021779.1 MGP_NODShiLtJ_G0016324.1 mouse_genomes_project 1 150254377 150279335 - MGP_NODShiLtJ_P0021779 Ikbke protein_coding protein_coding MGP_NODShiLtJ_T0021780.1 MGP_NODShiLtJ_G0016324.1 mouse_genomes_project 1 150258795 150267049 - Ikbke protein_coding retained_intron MGP_NODShiLtJ_T0021781.1 MGP_NODShiLtJ_G0016324.1 mouse_genomes_project 1 150263114 150271307 - Ikbke protein_coding retained_intron MGP_NODShiLtJ_T0021782.1 MGP_NODShiLtJ_G0016324.1 mouse_genomes_project 1 150271663 150273304 - Ikbke protein_coding retained_intron MGP_NODShiLtJ_T0021783.1 MGP_NODShiLtJ_G0016324.1 mouse_genomes_project 1 150274553 150279097 - MGP_NODShiLtJ_P0021783 Ikbke protein_coding protein_coding MGP_NODShiLtJ_T0021254.1 MGP_NODShiLtJ_G0016207.1 mouse_genomes_project 1 104829412 104836063 - MGP_NODShiLtJ_P0021254 Mterf4 protein_coding protein_coding MGP_NODShiLtJ_T0021255.1 MGP_NODShiLtJ_G0016207.1 mouse_genomes_project 1 104831414 104836115 - MGP_NODShiLtJ_P0021255 Mterf4 protein_coding protein_coding MGP_NODShiLtJ_T0021256.1 MGP_NODShiLtJ_G0016207.1 mouse_genomes_project 1 104831637 104833103 - Mterf4 protein_coding processed_transcript MGP_NODShiLtJ_T0021257.1 MGP_NODShiLtJ_G0016207.1 mouse_genomes_project 1 104832126 104836064 - MGP_NODShiLtJ_P0021257 Mterf4 protein_coding protein_coding MGP_NODShiLtJ_T0021258.1 MGP_NODShiLtJ_G0016207.1 mouse_genomes_project 1 104833698 104836079 - Mterf4 protein_coding retained_intron MGP_NODShiLtJ_T0022723.1 MGP_NODShiLtJ_G0016512.1 mouse_genomes_project 1 184567780 184581455 - MGP_NODShiLtJ_P0022723 Cacybp protein_coding protein_coding MGP_NODShiLtJ_T0022724.1 MGP_NODShiLtJ_G0016512.1 mouse_genomes_project 1 184574695 184581385 - MGP_NODShiLtJ_P0022724 Cacybp protein_coding protein_coding MGP_NODShiLtJ_T0022725.1 MGP_NODShiLtJ_G0016512.1 mouse_genomes_project 1 184576666 184581306 - Cacybp protein_coding retained_intron MGP_NODShiLtJ_T0012091.1 MGP_NODShiLtJ_G0010199.1 mouse_genomes_project 1 137402825 137403188 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000722.1 MGP_NODShiLtJ_G0000656.1 mouse_genomes_project 1 197226780 197229065 + TEC TEC MGP_NODShiLtJ_T0020085.1 MGP_NODShiLtJ_G0015974.1 mouse_genomes_project 1 72944448 72965242 - MGP_NODShiLtJ_P0020085 Idh1 protein_coding protein_coding MGP_NODShiLtJ_T0020086.1 MGP_NODShiLtJ_G0015974.1 mouse_genomes_project 1 72944450 72973605 - MGP_NODShiLtJ_P0020086 Idh1 protein_coding protein_coding MGP_NODShiLtJ_T0020087.1 MGP_NODShiLtJ_G0015974.1 mouse_genomes_project 1 72952094 72973564 - MGP_NODShiLtJ_P0020087 Idh1 protein_coding protein_coding MGP_NODShiLtJ_T0020088.1 MGP_NODShiLtJ_G0015974.1 mouse_genomes_project 1 72952139 72973626 - MGP_NODShiLtJ_P0020088 Idh1 protein_coding protein_coding MGP_NODShiLtJ_T0020089.1 MGP_NODShiLtJ_G0015974.1 mouse_genomes_project 1 72954511 72961563 - MGP_NODShiLtJ_P0020089 Idh1 protein_coding protein_coding MGP_NODShiLtJ_T0020090.1 MGP_NODShiLtJ_G0015974.1 mouse_genomes_project 1 72957042 72973585 - MGP_NODShiLtJ_P0020090 Idh1 protein_coding protein_coding MGP_NODShiLtJ_T0020091.1 MGP_NODShiLtJ_G0015974.1 mouse_genomes_project 1 72961294 72973605 - MGP_NODShiLtJ_P0020091 Idh1 protein_coding protein_coding MGP_NODShiLtJ_T0009476.1 MGP_NODShiLtJ_G0007609.1 mouse_genomes_project 1 222694270 222694334 + Mir3962 miRNA miRNA MGP_NODShiLtJ_T0022266.1 MGP_NODShiLtJ_G0016426.1 mouse_genomes_project 1 159377773 159403898 + MGP_NODShiLtJ_P0022266 F13b protein_coding protein_coding MGP_NODShiLtJ_T0022267.1 MGP_NODShiLtJ_G0016426.1 mouse_genomes_project 1 159377817 159411331 + MGP_NODShiLtJ_P0022267 F13b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022268.1 MGP_NODShiLtJ_G0016426.1 mouse_genomes_project 1 159395537 159398184 + F13b protein_coding processed_transcript MGP_NODShiLtJ_T0098544.1 MGP_NODShiLtJ_G0036938.1 mouse_genomes_project 1 98277674 98277769 - Gm23504 snRNA snRNA MGP_NODShiLtJ_T0011836.1 MGP_NODShiLtJ_G0009944.1 mouse_genomes_project 1 36381104 36383361 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020743.1 MGP_NODShiLtJ_G0016091.1 mouse_genomes_project 1 93632311 93799874 - MGP_NODShiLtJ_P0020743 Sphkap protein_coding protein_coding MGP_NODShiLtJ_T0020744.1 MGP_NODShiLtJ_G0016091.1 mouse_genomes_project 1 93633618 93799681 - MGP_NODShiLtJ_P0020744 Sphkap protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020745.1 MGP_NODShiLtJ_G0016091.1 mouse_genomes_project 1 93633622 93657824 - MGP_NODShiLtJ_P0020745 Sphkap protein_coding protein_coding MGP_NODShiLtJ_T0020746.1 MGP_NODShiLtJ_G0016091.1 mouse_genomes_project 1 93643927 93799839 - Sphkap protein_coding retained_intron MGP_NODShiLtJ_T0020747.1 MGP_NODShiLtJ_G0016091.1 mouse_genomes_project 1 93725938 93799813 - Sphkap protein_coding retained_intron MGP_NODShiLtJ_T0020748.1 MGP_NODShiLtJ_G0016091.1 mouse_genomes_project 1 93772062 93799839 - Sphkap protein_coding retained_intron MGP_NODShiLtJ_T0101254.1 MGP_NODShiLtJ_G0039539.1 mouse_genomes_project 1 59627938 59636080 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101255.1 MGP_NODShiLtJ_G0039539.1 mouse_genomes_project 1 59627964 59649257 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0021797.1 MGP_NODShiLtJ_G0016327.1 mouse_genomes_project 1 150614763 150628464 + MGP_NODShiLtJ_P0021797 Avpr1b protein_coding protein_coding MGP_NODShiLtJ_T0021798.1 MGP_NODShiLtJ_G0016327.1 mouse_genomes_project 1 150615247 150626218 + MGP_NODShiLtJ_P0021798 Avpr1b protein_coding protein_coding MGP_NODShiLtJ_T0000512.1 MGP_NODShiLtJ_G0000448.1 mouse_genomes_project 1 88083411 88084229 + TEC TEC MGP_NODShiLtJ_T0024116.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220899213 220925173 - MGP_NODShiLtJ_P0024116 Traf3ip3 protein_coding protein_coding MGP_NODShiLtJ_T0024117.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220899254 220925386 - MGP_NODShiLtJ_P0024117 Traf3ip3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024118.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220899264 220925386 - MGP_NODShiLtJ_P0024118 Traf3ip3 protein_coding protein_coding MGP_NODShiLtJ_T0024119.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220903019 220908597 - MGP_NODShiLtJ_P0024119 Traf3ip3 protein_coding protein_coding MGP_NODShiLtJ_T0024120.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220903023 220921661 - Traf3ip3 protein_coding retained_intron MGP_NODShiLtJ_T0024121.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220908352 220918367 - MGP_NODShiLtJ_P0024121 Traf3ip3 protein_coding protein_coding MGP_NODShiLtJ_T0024122.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220908441 220910919 - MGP_NODShiLtJ_P0024122 Traf3ip3 protein_coding protein_coding MGP_NODShiLtJ_T0024123.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220908968 220925294 - Traf3ip3 protein_coding retained_intron MGP_NODShiLtJ_T0024124.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220918144 220925355 - Traf3ip3 protein_coding retained_intron MGP_NODShiLtJ_T0024125.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220918311 220921810 - MGP_NODShiLtJ_P0024125 Traf3ip3 protein_coding protein_coding MGP_NODShiLtJ_T0024126.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220921866 220925337 - Traf3ip3 protein_coding processed_transcript MGP_NODShiLtJ_T0024127.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220921873 220925341 - Traf3ip3 protein_coding processed_transcript MGP_NODShiLtJ_T0024128.1 MGP_NODShiLtJ_G0016829.1 mouse_genomes_project 1 220924734 220925542 - Traf3ip3 protein_coding processed_transcript MGP_NODShiLtJ_T0002871.1 MGP_NODShiLtJ_G0002699.1 mouse_genomes_project 1 179723521 179767876 + Gm37571 antisense antisense MGP_NODShiLtJ_T0009463.1 MGP_NODShiLtJ_G0007596.1 mouse_genomes_project 1 196521603 196521665 - Gm27844 miRNA miRNA MGP_NODShiLtJ_T0011145.1 MGP_NODShiLtJ_G0009278.1 mouse_genomes_project 1 150083839 150084192 - Gm25717 misc_RNA misc_RNA MGP_NODShiLtJ_T0023680.1 MGP_NODShiLtJ_G0016739.1 mouse_genomes_project 1 207388597 207399611 + MGP_NODShiLtJ_P0023680 Parp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023681.1 MGP_NODShiLtJ_G0016739.1 mouse_genomes_project 1 207388602 207422445 + MGP_NODShiLtJ_P0023681 Parp1 protein_coding protein_coding MGP_NODShiLtJ_T0023682.1 MGP_NODShiLtJ_G0016739.1 mouse_genomes_project 1 207388899 207398074 + MGP_NODShiLtJ_P0023682 Parp1 protein_coding protein_coding MGP_NODShiLtJ_T0023683.1 MGP_NODShiLtJ_G0016739.1 mouse_genomes_project 1 207409912 207412096 + Parp1 protein_coding retained_intron MGP_NODShiLtJ_T0023684.1 MGP_NODShiLtJ_G0016739.1 mouse_genomes_project 1 207419415 207421387 + Parp1 protein_coding retained_intron MGP_NODShiLtJ_T0023685.1 MGP_NODShiLtJ_G0016739.1 mouse_genomes_project 1 207420026 207421297 + Parp1 protein_coding retained_intron MGP_NODShiLtJ_T0023686.1 MGP_NODShiLtJ_G0016739.1 mouse_genomes_project 1 207420178 207422443 + MGP_NODShiLtJ_P0023686 Parp1 protein_coding protein_coding MGP_NODShiLtJ_T0000538.1 MGP_NODShiLtJ_G0000474.1 mouse_genomes_project 1 97590764 97594441 + TEC TEC MGP_NODShiLtJ_T0000607.1 MGP_NODShiLtJ_G0000543.1 mouse_genomes_project 1 148758671 148761565 + TEC TEC MGP_NODShiLtJ_T0022185.1 MGP_NODShiLtJ_G0016410.1 mouse_genomes_project 1 155714631 155735384 - MGP_NODShiLtJ_P0022185 5730559C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0022186.1 MGP_NODShiLtJ_G0016410.1 mouse_genomes_project 1 155721370 155731382 - MGP_NODShiLtJ_P0022186 5730559C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0022187.1 MGP_NODShiLtJ_G0016410.1 mouse_genomes_project 1 155721408 155731403 - MGP_NODShiLtJ_P0022187 5730559C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0022188.1 MGP_NODShiLtJ_G0016410.1 mouse_genomes_project 1 155724655 155728755 - 5730559C18Rik protein_coding retained_intron MGP_NODShiLtJ_T0022189.1 MGP_NODShiLtJ_G0016410.1 mouse_genomes_project 1 155727285 155735239 - MGP_NODShiLtJ_P0022189 5730559C18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022190.1 MGP_NODShiLtJ_G0016410.1 mouse_genomes_project 1 155727306 155731112 - MGP_NODShiLtJ_P0022190 5730559C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0098518.1 MGP_NODShiLtJ_G0036912.1 mouse_genomes_project 1 36435730 36435836 + Gm23453 snRNA snRNA MGP_NODShiLtJ_T0005683.1 MGP_NODShiLtJ_G0004766.1 mouse_genomes_project 1 66523712 66536982 + Gm29016 lincRNA lincRNA MGP_NODShiLtJ_T0022069.1 MGP_NODShiLtJ_G0016387.1 mouse_genomes_project 1 154392806 154525247 - MGP_NODShiLtJ_P0022069 Lgr6 protein_coding protein_coding MGP_NODShiLtJ_T0022070.1 MGP_NODShiLtJ_G0016387.1 mouse_genomes_project 1 154392814 154525521 - MGP_NODShiLtJ_P0022070 Lgr6 protein_coding protein_coding MGP_NODShiLtJ_T0022071.1 MGP_NODShiLtJ_G0016387.1 mouse_genomes_project 1 154414454 154434821 - Lgr6 protein_coding processed_transcript MGP_NODShiLtJ_T0101488.1 MGP_NODShiLtJ_G0039658.1 mouse_genomes_project 1 104076639 104076685 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0021552.1 MGP_NODShiLtJ_G0016272.1 mouse_genomes_project 1 137533614 137602572 - MGP_NODShiLtJ_P0021552 Cfap221 protein_coding protein_coding MGP_NODShiLtJ_T0021553.1 MGP_NODShiLtJ_G0016272.1 mouse_genomes_project 1 137533792 137600598 - MGP_NODShiLtJ_P0021553 Cfap221 protein_coding protein_coding MGP_NODShiLtJ_T0021554.1 MGP_NODShiLtJ_G0016272.1 mouse_genomes_project 1 137567669 137602616 - MGP_NODShiLtJ_P0021554 Cfap221 protein_coding protein_coding MGP_NODShiLtJ_T0000732.1 MGP_NODShiLtJ_G0000666.1 mouse_genomes_project 1 203276125 203279268 + TEC TEC MGP_NODShiLtJ_T0020945.1 MGP_NODShiLtJ_G0016136.1 mouse_genomes_project 1 98351182 98386840 - MGP_NODShiLtJ_P0020945 Ngef protein_coding protein_coding MGP_NODShiLtJ_T0020946.1 MGP_NODShiLtJ_G0016136.1 mouse_genomes_project 1 98351182 98456305 - MGP_NODShiLtJ_P0020946 Ngef protein_coding protein_coding MGP_NODShiLtJ_T0020947.1 MGP_NODShiLtJ_G0016136.1 mouse_genomes_project 1 98353033 98360526 - MGP_NODShiLtJ_P0020947 Ngef protein_coding protein_coding MGP_NODShiLtJ_T0020948.1 MGP_NODShiLtJ_G0016136.1 mouse_genomes_project 1 98354077 98360566 - Ngef protein_coding retained_intron MGP_NODShiLtJ_T0011752.1 MGP_NODShiLtJ_G0009860.1 mouse_genomes_project 1 4958456 4958844 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011965.1 MGP_NODShiLtJ_G0010073.1 mouse_genomes_project 1 74019075 74019821 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011810.1 MGP_NODShiLtJ_G0009918.1 mouse_genomes_project 1 24507227 24508094 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023884.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212496147 212544729 + Eprs protein_coding retained_intron MGP_NODShiLtJ_T0023885.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212496147 212566173 + MGP_NODShiLtJ_P0023885 Eprs protein_coding protein_coding MGP_NODShiLtJ_T0023886.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212496161 212500025 + Eprs protein_coding retained_intron MGP_NODShiLtJ_T0023887.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212496235 212511373 + Eprs protein_coding retained_intron MGP_NODShiLtJ_T0023888.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212496287 212516239 + MGP_NODShiLtJ_P0023888 Eprs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023889.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212498540 212507724 + Eprs protein_coding retained_intron MGP_NODShiLtJ_T0023890.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212500641 212513285 + MGP_NODShiLtJ_P0023890 Eprs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023891.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212500648 212508744 + Eprs protein_coding retained_intron MGP_NODShiLtJ_T0023892.1 MGP_NODShiLtJ_G0016785.1 mouse_genomes_project 1 212534420 212538075 + Eprs protein_coding retained_intron MGP_NODShiLtJ_T0005717.1 MGP_NODShiLtJ_G0004793.1 mouse_genomes_project 1 81225863 81283208 - 4930556G22Rik lincRNA lincRNA MGP_NODShiLtJ_T0022783.1 MGP_NODShiLtJ_G0016520.1 mouse_genomes_project 1 185700550 185723780 + MGP_NODShiLtJ_P0022783 Ankrd45 protein_coding protein_coding MGP_NODShiLtJ_T0022784.1 MGP_NODShiLtJ_G0016520.1 mouse_genomes_project 1 185700571 185730894 + MGP_NODShiLtJ_P0022784 Ankrd45 protein_coding protein_coding MGP_NODShiLtJ_T0022785.1 MGP_NODShiLtJ_G0016520.1 mouse_genomes_project 1 185700582 185728235 + MGP_NODShiLtJ_P0022785 Ankrd45 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022786.1 MGP_NODShiLtJ_G0016520.1 mouse_genomes_project 1 185700599 185724699 + MGP_NODShiLtJ_P0022786 Ankrd45 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022787.1 MGP_NODShiLtJ_G0016520.1 mouse_genomes_project 1 185700626 185724676 + MGP_NODShiLtJ_P0022787 Ankrd45 protein_coding protein_coding MGP_NODShiLtJ_T0005685.1 MGP_NODShiLtJ_G0004768.1 mouse_genomes_project 1 68098973 68110561 - lincRNA lincRNA MGP_NODShiLtJ_T0022927.1 MGP_NODShiLtJ_G0016553.1 mouse_genomes_project 1 189156689 189178669 - MGP_NODShiLtJ_P0022927 Blzf1 protein_coding protein_coding MGP_NODShiLtJ_T0022928.1 MGP_NODShiLtJ_G0016553.1 mouse_genomes_project 1 189158275 189178674 - MGP_NODShiLtJ_P0022928 Blzf1 protein_coding protein_coding MGP_NODShiLtJ_T0022929.1 MGP_NODShiLtJ_G0016553.1 mouse_genomes_project 1 189159016 189178674 - MGP_NODShiLtJ_P0022929 Blzf1 protein_coding protein_coding MGP_NODShiLtJ_T0022930.1 MGP_NODShiLtJ_G0016553.1 mouse_genomes_project 1 189170704 189178457 - Blzf1 protein_coding processed_transcript MGP_NODShiLtJ_T0022932.1 MGP_NODShiLtJ_G0016553.1 mouse_genomes_project 1 189176386 189178656 - Blzf1 protein_coding retained_intron MGP_NODShiLtJ_T0000498.1 MGP_NODShiLtJ_G0000434.1 mouse_genomes_project 1 77191117 77192483 - TEC TEC MGP_NODShiLtJ_T0023325.1 MGP_NODShiLtJ_G0016644.1 mouse_genomes_project 1 197605707 197610989 - MGP_NODShiLtJ_P0023325 Nhlh1 protein_coding protein_coding MGP_NODShiLtJ_T0011152.1 MGP_NODShiLtJ_G0009285.1 mouse_genomes_project 1 218826678 218826786 + Gm24748 misc_RNA misc_RNA MGP_NODShiLtJ_T0023424.1 MGP_NODShiLtJ_G0016668.1 mouse_genomes_project 1 198804062 198805649 - MGP_NODShiLtJ_P0023424 Olfr1408 protein_coding protein_coding MGP_NODShiLtJ_T0023425.1 MGP_NODShiLtJ_G0016668.1 mouse_genomes_project 1 198804062 198823288 - MGP_NODShiLtJ_P0023425 Olfr1408 protein_coding protein_coding MGP_NODShiLtJ_T0023431.1 MGP_NODShiLtJ_G0016673.1 mouse_genomes_project 1 199060312 199062179 - Ackr1 protein_coding processed_transcript MGP_NODShiLtJ_T0023432.1 MGP_NODShiLtJ_G0016673.1 mouse_genomes_project 1 199060316 199061931 - MGP_NODShiLtJ_P0023432 Ackr1 protein_coding protein_coding MGP_NODShiLtJ_T0023433.1 MGP_NODShiLtJ_G0016673.1 mouse_genomes_project 1 199060318 199062102 - MGP_NODShiLtJ_P0023433 Ackr1 protein_coding protein_coding MGP_NODShiLtJ_T0000391.1 MGP_NODShiLtJ_G0000329.1 mouse_genomes_project 1 21444791 21447117 - TEC TEC MGP_NODShiLtJ_T0098555.1 MGP_NODShiLtJ_G0036949.1 mouse_genomes_project 1 137061122 137061226 + Gm25322 snRNA snRNA MGP_NODShiLtJ_T0000579.1 MGP_NODShiLtJ_G0000515.1 mouse_genomes_project 1 139431408 139432157 + TEC TEC MGP_NODShiLtJ_T0021984.1 MGP_NODShiLtJ_G0016367.1 mouse_genomes_project 1 153205257 153216379 - MGP_NODShiLtJ_P0021984 Prelp protein_coding protein_coding MGP_NODShiLtJ_T0021985.1 MGP_NODShiLtJ_G0016367.1 mouse_genomes_project 1 153207673 153216376 - Prelp protein_coding processed_transcript MGP_NODShiLtJ_T0000546.1 MGP_NODShiLtJ_G0000482.1 mouse_genomes_project 1 98819805 98822796 + TEC TEC MGP_NODShiLtJ_T0000563.1 MGP_NODShiLtJ_G0000499.1 mouse_genomes_project 1 113099397 113102089 + TEC TEC MGP_NODShiLtJ_T0098521.1 MGP_NODShiLtJ_G0036915.1 mouse_genomes_project 1 50071692 50071799 - Gm23216 snRNA snRNA MGP_NODShiLtJ_T0101485.1 MGP_NODShiLtJ_G0039655.1 mouse_genomes_project 1 99189831 99190689 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011863.1 MGP_NODShiLtJ_G0009971.1 mouse_genomes_project 1 43960834 43961504 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012228.1 MGP_NODShiLtJ_G0010336.1 mouse_genomes_project 1 207926334 207926981 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012151.1 MGP_NODShiLtJ_G0010259.1 mouse_genomes_project 1 171281952 171282251 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098565.1 MGP_NODShiLtJ_G0036959.1 mouse_genomes_project 1 156244239 156244337 + Gm24086 snRNA snRNA MGP_NODShiLtJ_T0009439.1 MGP_NODShiLtJ_G0007572.1 mouse_genomes_project 1 150508118 150508282 - Gm24273 miRNA miRNA MGP_NODShiLtJ_T0009376.1 MGP_NODShiLtJ_G0007509.1 mouse_genomes_project 1 6975066 6975176 + Gm24276 miRNA miRNA MGP_NODShiLtJ_T0000516.1 MGP_NODShiLtJ_G0000452.1 mouse_genomes_project 1 90041231 90043063 - TEC TEC MGP_NODShiLtJ_T0021309.1 MGP_NODShiLtJ_G0016216.1 mouse_genomes_project 1 105262862 105315780 - MGP_NODShiLtJ_P0021309 Thap4 protein_coding protein_coding MGP_NODShiLtJ_T0021310.1 MGP_NODShiLtJ_G0016216.1 mouse_genomes_project 1 105266326 105292371 - MGP_NODShiLtJ_P0021310 Thap4 protein_coding protein_coding MGP_NODShiLtJ_T0021311.1 MGP_NODShiLtJ_G0016216.1 mouse_genomes_project 1 105266329 105315864 - MGP_NODShiLtJ_P0021311 Thap4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021312.1 MGP_NODShiLtJ_G0016216.1 mouse_genomes_project 1 105266330 105275749 - MGP_NODShiLtJ_P0021312 Thap4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021313.1 MGP_NODShiLtJ_G0016216.1 mouse_genomes_project 1 105275546 105310966 - MGP_NODShiLtJ_P0021313 Thap4 protein_coding protein_coding MGP_NODShiLtJ_T0021314.1 MGP_NODShiLtJ_G0016216.1 mouse_genomes_project 1 105285058 105315650 - Thap4 protein_coding retained_intron MGP_NODShiLtJ_T0019665.1 MGP_NODShiLtJ_G0015893.1 mouse_genomes_project 1 61675619 61724747 - MGP_NODShiLtJ_P0019665 Sf3b1 protein_coding protein_coding MGP_NODShiLtJ_T0019666.1 MGP_NODShiLtJ_G0015893.1 mouse_genomes_project 1 61675623 61682077 - Sf3b1 protein_coding retained_intron MGP_NODShiLtJ_T0019667.1 MGP_NODShiLtJ_G0015893.1 mouse_genomes_project 1 61679913 61683505 - Sf3b1 protein_coding retained_intron MGP_NODShiLtJ_T0019668.1 MGP_NODShiLtJ_G0015893.1 mouse_genomes_project 1 61694536 61724730 - Sf3b1 protein_coding retained_intron MGP_NODShiLtJ_T0019669.1 MGP_NODShiLtJ_G0015893.1 mouse_genomes_project 1 61699036 61710221 - Sf3b1 protein_coding retained_intron MGP_NODShiLtJ_T0019670.1 MGP_NODShiLtJ_G0015893.1 mouse_genomes_project 1 61705750 61724660 - MGP_NODShiLtJ_P0019670 Sf3b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019671.1 MGP_NODShiLtJ_G0015893.1 mouse_genomes_project 1 61710828 61724639 - Sf3b1 protein_coding processed_transcript MGP_NODShiLtJ_T0019672.1 MGP_NODShiLtJ_G0015893.1 mouse_genomes_project 1 61710958 61711958 - Sf3b1 protein_coding retained_intron MGP_NODShiLtJ_T0005811.1 MGP_NODShiLtJ_G0004870.1 mouse_genomes_project 1 136552892 136554266 + Gm26831 lincRNA lincRNA MGP_NODShiLtJ_T0098528.1 MGP_NODShiLtJ_G0036922.1 mouse_genomes_project 1 70922555 70922659 - Gm23448 snRNA snRNA MGP_NODShiLtJ_T0098545.1 MGP_NODShiLtJ_G0036939.1 mouse_genomes_project 1 104895874 104895977 + Gm26446 snRNA snRNA MGP_NODShiLtJ_T0022560.1 MGP_NODShiLtJ_G0016486.1 mouse_genomes_project 1 179679872 179683264 - Qsox1 protein_coding retained_intron MGP_NODShiLtJ_T0022561.1 MGP_NODShiLtJ_G0016486.1 mouse_genomes_project 1 179682001 179716859 - MGP_NODShiLtJ_P0022561 Qsox1 protein_coding protein_coding MGP_NODShiLtJ_T0022562.1 MGP_NODShiLtJ_G0016486.1 mouse_genomes_project 1 179682002 179716821 - MGP_NODShiLtJ_P0022562 Qsox1 protein_coding protein_coding MGP_NODShiLtJ_T0022563.1 MGP_NODShiLtJ_G0016486.1 mouse_genomes_project 1 179682005 179716814 - MGP_NODShiLtJ_P0022563 Qsox1 protein_coding protein_coding MGP_NODShiLtJ_T0022564.1 MGP_NODShiLtJ_G0016486.1 mouse_genomes_project 1 179683759 179685835 - Qsox1 protein_coding processed_transcript MGP_NODShiLtJ_T0022565.1 MGP_NODShiLtJ_G0016486.1 mouse_genomes_project 1 179697996 179716790 - Qsox1 protein_coding retained_intron MGP_NODShiLtJ_T0022566.1 MGP_NODShiLtJ_G0016486.1 mouse_genomes_project 1 179698170 179699245 - Qsox1 protein_coding retained_intron MGP_NODShiLtJ_T0022567.1 MGP_NODShiLtJ_G0016486.1 mouse_genomes_project 1 179705298 179716808 - Qsox1 protein_coding retained_intron MGP_NODShiLtJ_T0002901.1 MGP_NODShiLtJ_G0002723.1 mouse_genomes_project 1 195529297 195529996 + 4930500M09Rik antisense antisense MGP_NODShiLtJ_T0002902.1 MGP_NODShiLtJ_G0002723.1 mouse_genomes_project 1 195529297 195530863 + 4930500M09Rik antisense antisense MGP_NODShiLtJ_T0023514.1 MGP_NODShiLtJ_G0016708.1 mouse_genomes_project 1 201859089 201890624 - MGP_NODShiLtJ_P0023514 Opn3 protein_coding protein_coding MGP_NODShiLtJ_T0023619.1 MGP_NODShiLtJ_G0016731.1 mouse_genomes_project 1 206383441 206458624 - MGP_NODShiLtJ_P0023619 Gm1305 protein_coding protein_coding MGP_NODShiLtJ_T0000736.1 MGP_NODShiLtJ_G0000670.1 mouse_genomes_project 1 203505840 203508632 - TEC TEC MGP_NODShiLtJ_T0009411.1 MGP_NODShiLtJ_G0007544.1 mouse_genomes_project 1 83855499 83855584 + Mir26b miRNA miRNA MGP_NODShiLtJ_T0022310.1 MGP_NODShiLtJ_G0016438.1 mouse_genomes_project 1 165389393 165433280 - MGP_NODShiLtJ_P0022310 Rgs13 protein_coding protein_coding MGP_NODShiLtJ_T0022311.1 MGP_NODShiLtJ_G0016438.1 mouse_genomes_project 1 165389406 165433183 - MGP_NODShiLtJ_P0022311 Rgs13 protein_coding protein_coding MGP_NODShiLtJ_T0002874.1 MGP_NODShiLtJ_G0002702.1 mouse_genomes_project 1 181586307 181603927 - Gm15486 antisense antisense MGP_NODShiLtJ_T0021138.1 MGP_NODShiLtJ_G0016178.1 mouse_genomes_project 1 102845428 102847168 - Hes6 protein_coding retained_intron MGP_NODShiLtJ_T0021139.1 MGP_NODShiLtJ_G0016178.1 mouse_genomes_project 1 102845428 102847154 - Hes6 protein_coding retained_intron MGP_NODShiLtJ_T0021140.1 MGP_NODShiLtJ_G0016178.1 mouse_genomes_project 1 102845428 102847168 - MGP_NODShiLtJ_P0021140 Hes6 protein_coding protein_coding MGP_NODShiLtJ_T0021141.1 MGP_NODShiLtJ_G0016178.1 mouse_genomes_project 1 102846232 102847154 - Hes6 protein_coding retained_intron MGP_NODShiLtJ_T0021142.1 MGP_NODShiLtJ_G0016178.1 mouse_genomes_project 1 102846293 102847984 - Hes6 protein_coding processed_transcript MGP_NODShiLtJ_T0000458.1 MGP_NODShiLtJ_G0000394.1 mouse_genomes_project 1 57639744 57642145 - TEC TEC MGP_NODShiLtJ_T0012193.1 MGP_NODShiLtJ_G0010301.1 mouse_genomes_project 1 189391454 189391770 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022612.1 MGP_NODShiLtJ_G0016494.1 mouse_genomes_project 1 180349281 180400244 - MGP_NODShiLtJ_P0022612 Soat1 protein_coding protein_coding MGP_NODShiLtJ_T0022613.1 MGP_NODShiLtJ_G0016494.1 mouse_genomes_project 1 180354534 180392737 - MGP_NODShiLtJ_P0022613 Soat1 protein_coding protein_coding MGP_NODShiLtJ_T0022614.1 MGP_NODShiLtJ_G0016494.1 mouse_genomes_project 1 180355463 180357312 - Soat1 protein_coding retained_intron MGP_NODShiLtJ_T0022615.1 MGP_NODShiLtJ_G0016494.1 mouse_genomes_project 1 180355721 180357758 - Soat1 protein_coding retained_intron MGP_NODShiLtJ_T0022616.1 MGP_NODShiLtJ_G0016494.1 mouse_genomes_project 1 180364863 180400153 - Soat1 protein_coding retained_intron MGP_NODShiLtJ_T0022617.1 MGP_NODShiLtJ_G0016494.1 mouse_genomes_project 1 180365289 180400209 - MGP_NODShiLtJ_P0022617 Soat1 protein_coding protein_coding MGP_NODShiLtJ_T0022618.1 MGP_NODShiLtJ_G0016494.1 mouse_genomes_project 1 180371900 180400110 - Soat1 protein_coding retained_intron MGP_NODShiLtJ_T0022619.1 MGP_NODShiLtJ_G0016494.1 mouse_genomes_project 1 180372133 180400177 - MGP_NODShiLtJ_P0022619 Soat1 protein_coding protein_coding MGP_NODShiLtJ_T0000737.1 MGP_NODShiLtJ_G0000671.1 mouse_genomes_project 1 203572271 203573019 - TEC TEC MGP_NODShiLtJ_T0005691.1 MGP_NODShiLtJ_G0004774.1 mouse_genomes_project 1 68896139 68897217 + Gm28449 lincRNA lincRNA MGP_NODShiLtJ_T0011140.1 MGP_NODShiLtJ_G0009273.1 mouse_genomes_project 1 96414104 96414377 + Gm22906 misc_RNA misc_RNA MGP_NODShiLtJ_T0000742.1 MGP_NODShiLtJ_G0000675.1 mouse_genomes_project 1 206774227 206776766 + TEC TEC MGP_NODShiLtJ_T0019644.1 MGP_NODShiLtJ_G0015890.1 mouse_genomes_project 1 61020722 61080225 - MGP_NODShiLtJ_P0019644 Gtf3c3 protein_coding protein_coding MGP_NODShiLtJ_T0019645.1 MGP_NODShiLtJ_G0015890.1 mouse_genomes_project 1 61052876 61054484 - Gtf3c3 protein_coding retained_intron MGP_NODShiLtJ_T0012218.1 MGP_NODShiLtJ_G0010326.1 mouse_genomes_project 1 202586671 202587188 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101495.1 MGP_NODShiLtJ_G0039665.1 mouse_genomes_project 1 121642447 121646941 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0024129.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 220931792 220933031 + Lamb3 protein_coding retained_intron MGP_NODShiLtJ_T0024130.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 220931818 221093845 + MGP_NODShiLtJ_P0024130 Lamb3 protein_coding protein_coding MGP_NODShiLtJ_T0024131.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 220931825 221074379 + MGP_NODShiLtJ_P0024131 Lamb3 protein_coding protein_coding MGP_NODShiLtJ_T0024132.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 220931843 220985521 + Lamb3 protein_coding processed_transcript MGP_NODShiLtJ_T0024141.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 221018565 221027331 + Lamb3 protein_coding processed_transcript MGP_NODShiLtJ_T0024142.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 221050258 221093845 + MGP_NODShiLtJ_P0024142 Lamb3 protein_coding protein_coding MGP_NODShiLtJ_T0024143.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 221050486 221051759 + Lamb3 protein_coding processed_transcript MGP_NODShiLtJ_T0024144.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 221050508 221093842 + MGP_NODShiLtJ_P0024144 Lamb3 protein_coding protein_coding MGP_NODShiLtJ_T0024145.1 MGP_NODShiLtJ_G0016830.1 mouse_genomes_project 1 221069090 221074378 + Lamb3 protein_coding processed_transcript MGP_NODShiLtJ_T0000358.1 MGP_NODShiLtJ_G0000296.1 mouse_genomes_project 1 4976193 4980223 + TEC TEC MGP_NODShiLtJ_T0016962.1 MGP_NODShiLtJ_G0014994.1 mouse_genomes_project 1 196263040 196276688 + Gm9929 processed_transcript processed_transcript MGP_NODShiLtJ_T0023515.1 MGP_NODShiLtJ_G0016709.1 mouse_genomes_project 1 201879744 201886179 - MGP_NODShiLtJ_P0023515 Chml protein_coding protein_coding MGP_NODShiLtJ_T0005960.1 MGP_NODShiLtJ_G0004989.1 mouse_genomes_project 1 211402666 211436171 + Gm37223 lincRNA lincRNA MGP_NODShiLtJ_T0005961.1 MGP_NODShiLtJ_G0004989.1 mouse_genomes_project 1 211402666 211436200 + Gm37223 lincRNA lincRNA MGP_NODShiLtJ_T0005962.1 MGP_NODShiLtJ_G0004989.1 mouse_genomes_project 1 211402666 211436203 + Gm37223 lincRNA lincRNA MGP_NODShiLtJ_T0005963.1 MGP_NODShiLtJ_G0004989.1 mouse_genomes_project 1 211402670 211439930 + Gm37223 lincRNA lincRNA MGP_NODShiLtJ_T0005964.1 MGP_NODShiLtJ_G0004989.1 mouse_genomes_project 1 211402681 211439958 + Gm37223 lincRNA lincRNA MGP_NODShiLtJ_T0005966.1 MGP_NODShiLtJ_G0004989.1 mouse_genomes_project 1 211428317 211439930 + Gm37223 lincRNA lincRNA MGP_NODShiLtJ_T0098238.1 MGP_NODShiLtJ_G0036649.1 mouse_genomes_project 1 176276839 176281520 - Gm15479 sense_intronic sense_intronic MGP_NODShiLtJ_T0000781.1 MGP_NODShiLtJ_G0000712.1 mouse_genomes_project 1 221118146 221118774 + TEC TEC MGP_NODShiLtJ_T0099776.1 MGP_NODShiLtJ_G0038170.1 mouse_genomes_project 1 97039986 97040066 - Gm24148 snoRNA snoRNA MGP_NODShiLtJ_T0020033.1 MGP_NODShiLtJ_G0015958.1 mouse_genomes_project 1 71434915 71460964 + MGP_NODShiLtJ_P0020033 Fastkd2 protein_coding protein_coding MGP_NODShiLtJ_T0020034.1 MGP_NODShiLtJ_G0015958.1 mouse_genomes_project 1 71434942 71442075 + Fastkd2 protein_coding retained_intron MGP_NODShiLtJ_T0020035.1 MGP_NODShiLtJ_G0015958.1 mouse_genomes_project 1 71434944 71458847 + Fastkd2 protein_coding retained_intron MGP_NODShiLtJ_T0020036.1 MGP_NODShiLtJ_G0015958.1 mouse_genomes_project 1 71441941 71454368 + Fastkd2 protein_coding processed_transcript MGP_NODShiLtJ_T0020037.1 MGP_NODShiLtJ_G0015958.1 mouse_genomes_project 1 71454331 71456586 + Fastkd2 protein_coding retained_intron MGP_NODShiLtJ_T0020038.1 MGP_NODShiLtJ_G0015958.1 mouse_genomes_project 1 71457530 71458774 + Fastkd2 protein_coding processed_transcript MGP_NODShiLtJ_T0005881.1 MGP_NODShiLtJ_G0004927.1 mouse_genomes_project 1 177785244 177788066 - Gm29291 lincRNA lincRNA MGP_NODShiLtJ_T0005882.1 MGP_NODShiLtJ_G0004927.1 mouse_genomes_project 1 177785400 177788070 - Gm29291 lincRNA lincRNA MGP_NODShiLtJ_T0023364.1 MGP_NODShiLtJ_G0016650.1 mouse_genomes_project 1 197776202 197786147 - MGP_NODShiLtJ_P0023364 Casq1 protein_coding protein_coding MGP_NODShiLtJ_T0023365.1 MGP_NODShiLtJ_G0016650.1 mouse_genomes_project 1 197776203 197780263 - Casq1 protein_coding retained_intron MGP_NODShiLtJ_T0023366.1 MGP_NODShiLtJ_G0016650.1 mouse_genomes_project 1 197781448 197785994 - MGP_NODShiLtJ_P0023366 Casq1 protein_coding protein_coding MGP_NODShiLtJ_T0023471.1 MGP_NODShiLtJ_G0016691.1 mouse_genomes_project 1 200063353 200068956 + MGP_NODShiLtJ_P0023471 Olfr429 protein_coding protein_coding MGP_NODShiLtJ_T0023472.1 MGP_NODShiLtJ_G0016691.1 mouse_genomes_project 1 200068013 200068956 + MGP_NODShiLtJ_P0023472 Olfr429 protein_coding protein_coding MGP_NODShiLtJ_T0012227.1 MGP_NODShiLtJ_G0010335.1 mouse_genomes_project 1 207740618 207741067 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099788.1 MGP_NODShiLtJ_G0038182.1 mouse_genomes_project 1 125093753 125093883 - Gm22159 snoRNA snoRNA MGP_NODShiLtJ_T0000531.1 MGP_NODShiLtJ_G0000467.1 mouse_genomes_project 1 94910520 94913440 - TEC TEC MGP_NODShiLtJ_T0019352.1 MGP_NODShiLtJ_G0015832.1 mouse_genomes_project 1 43930777 43935617 + Il1rl2 protein_coding retained_intron MGP_NODShiLtJ_T0019353.1 MGP_NODShiLtJ_G0015832.1 mouse_genomes_project 1 43930794 43972433 + MGP_NODShiLtJ_P0019353 Il1rl2 protein_coding protein_coding MGP_NODShiLtJ_T0019354.1 MGP_NODShiLtJ_G0015832.1 mouse_genomes_project 1 43930857 43974564 + MGP_NODShiLtJ_P0019354 Il1rl2 protein_coding protein_coding MGP_NODShiLtJ_T0019355.1 MGP_NODShiLtJ_G0015832.1 mouse_genomes_project 1 43931778 43935347 + MGP_NODShiLtJ_P0019355 Il1rl2 protein_coding protein_coding MGP_NODShiLtJ_T0000555.1 MGP_NODShiLtJ_G0000491.1 mouse_genomes_project 1 103436548 103442143 + TEC TEC MGP_NODShiLtJ_T0002827.1 MGP_NODShiLtJ_G0002666.1 mouse_genomes_project 1 146349479 146370786 - 2900009J06Rik antisense antisense MGP_NODShiLtJ_T0002828.1 MGP_NODShiLtJ_G0002666.1 mouse_genomes_project 1 146349479 146370824 - 2900009J06Rik antisense antisense MGP_NODShiLtJ_T0099760.1 MGP_NODShiLtJ_G0038154.1 mouse_genomes_project 1 66202130 66202261 + Gm25502 snoRNA snoRNA MGP_NODShiLtJ_T0022414.1 MGP_NODShiLtJ_G0016456.1 mouse_genomes_project 1 175396344 175649307 - MGP_NODShiLtJ_P0022414 1700025G04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022415.1 MGP_NODShiLtJ_G0016456.1 mouse_genomes_project 1 175429315 175649462 - MGP_NODShiLtJ_P0022415 1700025G04Rik protein_coding protein_coding MGP_NODShiLtJ_T0022416.1 MGP_NODShiLtJ_G0016456.1 mouse_genomes_project 1 175437679 175465926 - 1700025G04Rik protein_coding retained_intron MGP_NODShiLtJ_T0022417.1 MGP_NODShiLtJ_G0016456.1 mouse_genomes_project 1 175438016 175612156 - MGP_NODShiLtJ_P0022417 1700025G04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005953.1 MGP_NODShiLtJ_G0004982.1 mouse_genomes_project 1 208801761 208803377 - Gm5533 lincRNA lincRNA MGP_NODShiLtJ_T0099757.1 MGP_NODShiLtJ_G0038151.1 mouse_genomes_project 1 59356563 59356664 + Gm24349 snoRNA snoRNA MGP_NODShiLtJ_T0018928.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24384319 24468910 - MGP_NODShiLtJ_P0018928 Fam135a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018929.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24384319 24403785 - MGP_NODShiLtJ_P0018929 Fam135a protein_coding protein_coding MGP_NODShiLtJ_T0018930.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24384471 24481332 - MGP_NODShiLtJ_P0018930 Fam135a protein_coding protein_coding MGP_NODShiLtJ_T0018931.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24384817 24481320 - MGP_NODShiLtJ_P0018931 Fam135a protein_coding protein_coding MGP_NODShiLtJ_T0018932.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24384830 24406112 - MGP_NODShiLtJ_P0018932 Fam135a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018933.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24384907 24481471 - MGP_NODShiLtJ_P0018933 Fam135a protein_coding protein_coding MGP_NODShiLtJ_T0018934.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24400424 24405476 - MGP_NODShiLtJ_P0018934 Fam135a protein_coding protein_coding MGP_NODShiLtJ_T0018935.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24405747 24481354 - MGP_NODShiLtJ_P0018935 Fam135a protein_coding protein_coding MGP_NODShiLtJ_T0018936.1 MGP_NODShiLtJ_G0015754.1 mouse_genomes_project 1 24429553 24481479 - Fam135a protein_coding retained_intron MGP_NODShiLtJ_T0021848.1 MGP_NODShiLtJ_G0016338.1 mouse_genomes_project 1 151209798 151241400 - MGP_NODShiLtJ_P0021848 Cdk18 protein_coding protein_coding MGP_NODShiLtJ_T0021849.1 MGP_NODShiLtJ_G0016338.1 mouse_genomes_project 1 151212147 151214475 - Cdk18 protein_coding retained_intron MGP_NODShiLtJ_T0021850.1 MGP_NODShiLtJ_G0016338.1 mouse_genomes_project 1 151212325 151241321 - MGP_NODShiLtJ_P0021850 Cdk18 protein_coding protein_coding MGP_NODShiLtJ_T0021851.1 MGP_NODShiLtJ_G0016338.1 mouse_genomes_project 1 151212392 151214252 - MGP_NODShiLtJ_P0021851 Cdk18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021852.1 MGP_NODShiLtJ_G0016338.1 mouse_genomes_project 1 151212495 151213817 - Cdk18 protein_coding retained_intron MGP_NODShiLtJ_T0098580.1 MGP_NODShiLtJ_G0036974.1 mouse_genomes_project 1 196225251 196225358 - Gm25235 snRNA snRNA MGP_NODShiLtJ_T0000557.1 MGP_NODShiLtJ_G0000493.1 mouse_genomes_project 1 105077483 105081032 + TEC TEC MGP_NODShiLtJ_T0000568.1 MGP_NODShiLtJ_G0000504.1 mouse_genomes_project 1 120440511 120443872 - TEC TEC MGP_NODShiLtJ_T0098234.1 MGP_NODShiLtJ_G0036645.1 mouse_genomes_project 1 154863247 154867841 - Gm28277 sense_intronic sense_intronic MGP_NODShiLtJ_T0022620.1 MGP_NODShiLtJ_G0016495.1 mouse_genomes_project 1 180487812 180559426 + MGP_NODShiLtJ_P0022620 Abl2 protein_coding protein_coding MGP_NODShiLtJ_T0022621.1 MGP_NODShiLtJ_G0016495.1 mouse_genomes_project 1 180488013 180584871 + MGP_NODShiLtJ_P0022621 Abl2 protein_coding protein_coding MGP_NODShiLtJ_T0022622.1 MGP_NODShiLtJ_G0016495.1 mouse_genomes_project 1 180488075 180578017 + MGP_NODShiLtJ_P0022622 Abl2 protein_coding protein_coding MGP_NODShiLtJ_T0022623.1 MGP_NODShiLtJ_G0016495.1 mouse_genomes_project 1 180549148 180564217 + MGP_NODShiLtJ_P0022623 Abl2 protein_coding protein_coding MGP_NODShiLtJ_T0005912.1 MGP_NODShiLtJ_G0004950.1 mouse_genomes_project 1 189610835 189639241 + Gm37184 lincRNA lincRNA MGP_NODShiLtJ_T0101014.1 MGP_NODShiLtJ_G0039400.1 mouse_genomes_project 1 181493806 181501649 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101015.1 MGP_NODShiLtJ_G0039400.1 mouse_genomes_project 1 181494094 181501646 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101016.1 MGP_NODShiLtJ_G0039400.1 mouse_genomes_project 1 181494432 181494726 + transcribed_processed_pseudogene TEC MGP_NODShiLtJ_T0101017.1 MGP_NODShiLtJ_G0039400.1 mouse_genomes_project 1 181501314 181501565 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0020903.1 MGP_NODShiLtJ_G0016130.1 mouse_genomes_project 1 98042555 98046195 + MGP_NODShiLtJ_P0020903 Chrng protein_coding protein_coding MGP_NODShiLtJ_T0020904.1 MGP_NODShiLtJ_G0016130.1 mouse_genomes_project 1 98043708 98046194 + MGP_NODShiLtJ_P0020904 Chrng protein_coding protein_coding MGP_NODShiLtJ_T0020905.1 MGP_NODShiLtJ_G0016130.1 mouse_genomes_project 1 98043709 98051957 + MGP_NODShiLtJ_P0020905 Chrng protein_coding protein_coding MGP_NODShiLtJ_T0020906.1 MGP_NODShiLtJ_G0016130.1 mouse_genomes_project 1 98043783 98046194 + MGP_NODShiLtJ_P0020906 Chrng protein_coding protein_coding MGP_NODShiLtJ_T0020907.1 MGP_NODShiLtJ_G0016130.1 mouse_genomes_project 1 98043972 98046494 + Chrng protein_coding retained_intron MGP_NODShiLtJ_T0000492.1 MGP_NODShiLtJ_G0000428.1 mouse_genomes_project 1 74879702 74880841 - TEC TEC MGP_NODShiLtJ_T0011144.1 MGP_NODShiLtJ_G0009277.1 mouse_genomes_project 1 125354750 125355035 + Gm25293 misc_RNA misc_RNA MGP_NODShiLtJ_T0005668.1 MGP_NODShiLtJ_G0004756.1 mouse_genomes_project 1 57817208 57818791 - Gm28055 lincRNA lincRNA MGP_NODShiLtJ_T0005669.1 MGP_NODShiLtJ_G0004756.1 mouse_genomes_project 1 57818015 57869332 - Gm28055 lincRNA lincRNA MGP_NODShiLtJ_T0021979.1 MGP_NODShiLtJ_G0016366.1 mouse_genomes_project 1 153189161 153193290 - Optc protein_coding retained_intron MGP_NODShiLtJ_T0021980.1 MGP_NODShiLtJ_G0016366.1 mouse_genomes_project 1 153189161 153200744 - MGP_NODShiLtJ_P0021980 Optc protein_coding protein_coding MGP_NODShiLtJ_T0021981.1 MGP_NODShiLtJ_G0016366.1 mouse_genomes_project 1 153189162 153201571 - MGP_NODShiLtJ_P0021981 Optc protein_coding protein_coding MGP_NODShiLtJ_T0021982.1 MGP_NODShiLtJ_G0016366.1 mouse_genomes_project 1 153189661 153200698 - MGP_NODShiLtJ_P0021982 Optc protein_coding protein_coding MGP_NODShiLtJ_T0021983.1 MGP_NODShiLtJ_G0016366.1 mouse_genomes_project 1 153192796 153200574 - MGP_NODShiLtJ_P0021983 Optc protein_coding protein_coding MGP_NODShiLtJ_T0012145.1 MGP_NODShiLtJ_G0010253.1 mouse_genomes_project 1 166373520 166374664 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000767.1 MGP_NODShiLtJ_G0000699.1 mouse_genomes_project 1 214514294 214519200 + TEC TEC MGP_NODShiLtJ_T0012067.1 MGP_NODShiLtJ_G0010175.1 mouse_genomes_project 1 126387912 126388725 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000584.1 MGP_NODShiLtJ_G0000520.1 mouse_genomes_project 1 141467644 141469705 - TEC TEC MGP_NODShiLtJ_T0000646.1 MGP_NODShiLtJ_G0000580.1 mouse_genomes_project 1 158907545 158910007 + TEC TEC MGP_NODShiLtJ_T0005938.1 MGP_NODShiLtJ_G0004972.1 mouse_genomes_project 1 203961146 203966650 - Gm37280 lincRNA lincRNA MGP_NODShiLtJ_T0023052.1 MGP_NODShiLtJ_G0016577.1 mouse_genomes_project 1 191653552 191675897 - MGP_NODShiLtJ_P0023052 Gm4847 protein_coding protein_coding MGP_NODShiLtJ_T0022653.1 MGP_NODShiLtJ_G0016500.1 mouse_genomes_project 1 181084104 181093582 - MGP_NODShiLtJ_P0022653 Tex35 protein_coding protein_coding MGP_NODShiLtJ_T0022654.1 MGP_NODShiLtJ_G0016500.1 mouse_genomes_project 1 181084104 181093582 - MGP_NODShiLtJ_P0022654 Tex35 protein_coding protein_coding MGP_NODShiLtJ_T0022655.1 MGP_NODShiLtJ_G0016500.1 mouse_genomes_project 1 181084112 181093581 - MGP_NODShiLtJ_P0022655 Tex35 protein_coding protein_coding MGP_NODShiLtJ_T0022656.1 MGP_NODShiLtJ_G0016500.1 mouse_genomes_project 1 181084119 181093612 - MGP_NODShiLtJ_P0022656 Tex35 protein_coding protein_coding MGP_NODShiLtJ_T0022657.1 MGP_NODShiLtJ_G0016500.1 mouse_genomes_project 1 181084278 181093320 - MGP_NODShiLtJ_P0022657 Tex35 protein_coding protein_coding MGP_NODShiLtJ_T0022658.1 MGP_NODShiLtJ_G0016500.1 mouse_genomes_project 1 181084280 181093577 - MGP_NODShiLtJ_P0022658 Tex35 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099793.1 MGP_NODShiLtJ_G0038187.1 mouse_genomes_project 1 141466334 141466465 - Gm24791 snoRNA snoRNA MGP_NODShiLtJ_T0019148.1 MGP_NODShiLtJ_G0015795.1 mouse_genomes_project 1 39870228 39999391 - MGP_NODShiLtJ_P0019148 Fam178b protein_coding protein_coding MGP_NODShiLtJ_T0019149.1 MGP_NODShiLtJ_G0015795.1 mouse_genomes_project 1 39870232 39901730 - Fam178b protein_coding processed_transcript MGP_NODShiLtJ_T0019150.1 MGP_NODShiLtJ_G0015795.1 mouse_genomes_project 1 39870232 39897715 - Fam178b protein_coding processed_transcript MGP_NODShiLtJ_T0019151.1 MGP_NODShiLtJ_G0015795.1 mouse_genomes_project 1 39870232 39908766 - MGP_NODShiLtJ_P0019151 Fam178b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019152.1 MGP_NODShiLtJ_G0015795.1 mouse_genomes_project 1 39871864 39909309 - MGP_NODShiLtJ_P0019152 Fam178b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019153.1 MGP_NODShiLtJ_G0015795.1 mouse_genomes_project 1 39872403 39896085 - Fam178b protein_coding processed_transcript MGP_NODShiLtJ_T0019154.1 MGP_NODShiLtJ_G0015795.1 mouse_genomes_project 1 39883981 39908787 - Fam178b protein_coding processed_transcript MGP_NODShiLtJ_T0019155.1 MGP_NODShiLtJ_G0015795.1 mouse_genomes_project 1 39908330 39999391 - MGP_NODShiLtJ_P0019155 Fam178b protein_coding protein_coding MGP_NODShiLtJ_T0098559.1 MGP_NODShiLtJ_G0036953.1 mouse_genomes_project 1 147546740 147546851 - Gm23056 snRNA snRNA MGP_NODShiLtJ_T0101260.1 MGP_NODShiLtJ_G0039543.1 mouse_genomes_project 1 110240305 110364761 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0021829.1 MGP_NODShiLtJ_G0016336.1 mouse_genomes_project 1 151079340 151100699 + MGP_NODShiLtJ_P0021829 Elk4 protein_coding protein_coding MGP_NODShiLtJ_T0021830.1 MGP_NODShiLtJ_G0016336.1 mouse_genomes_project 1 151079647 151097903 + MGP_NODShiLtJ_P0021830 Elk4 protein_coding protein_coding MGP_NODShiLtJ_T0021831.1 MGP_NODShiLtJ_G0016336.1 mouse_genomes_project 1 151079870 151088877 + Elk4 protein_coding processed_transcript MGP_NODShiLtJ_T0021832.1 MGP_NODShiLtJ_G0016336.1 mouse_genomes_project 1 151079880 151088735 + Elk4 protein_coding processed_transcript MGP_NODShiLtJ_T0021833.1 MGP_NODShiLtJ_G0016336.1 mouse_genomes_project 1 151080068 151092545 + MGP_NODShiLtJ_P0021833 Elk4 protein_coding protein_coding MGP_NODShiLtJ_T0021834.1 MGP_NODShiLtJ_G0016336.1 mouse_genomes_project 1 151092047 151106622 + MGP_NODShiLtJ_P0021834 Elk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021835.1 MGP_NODShiLtJ_G0016336.1 mouse_genomes_project 1 151092682 151105704 + Elk4 protein_coding processed_transcript MGP_NODShiLtJ_T0021738.1 MGP_NODShiLtJ_G0016312.1 mouse_genomes_project 1 149681245 149695118 + MGP_NODShiLtJ_P0021738 AA986860 protein_coding protein_coding MGP_NODShiLtJ_T0021739.1 MGP_NODShiLtJ_G0016312.1 mouse_genomes_project 1 149681379 149692959 + AA986860 protein_coding processed_transcript MGP_NODShiLtJ_T0021740.1 MGP_NODShiLtJ_G0016312.1 mouse_genomes_project 1 149690767 149695117 + AA986860 protein_coding retained_intron MGP_NODShiLtJ_T0000422.1 MGP_NODShiLtJ_G0000359.1 mouse_genomes_project 1 35928424 35933427 - TEC TEC MGP_NODShiLtJ_T0022467.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177144503 177177822 - MGP_NODShiLtJ_P0022467 Dhx9 protein_coding protein_coding MGP_NODShiLtJ_T0022468.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177144503 177177874 - MGP_NODShiLtJ_P0022468 Dhx9 protein_coding protein_coding MGP_NODShiLtJ_T0022469.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177151350 177177859 - MGP_NODShiLtJ_P0022469 Dhx9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022470.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177151356 177167347 - MGP_NODShiLtJ_P0022470 Dhx9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022471.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177152962 177177865 - MGP_NODShiLtJ_P0022471 Dhx9 protein_coding protein_coding MGP_NODShiLtJ_T0022472.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177161304 177167361 - Dhx9 protein_coding retained_intron MGP_NODShiLtJ_T0022473.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177166046 177177872 - Dhx9 protein_coding retained_intron MGP_NODShiLtJ_T0022474.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177167484 177169740 - Dhx9 protein_coding retained_intron MGP_NODShiLtJ_T0022475.1 MGP_NODShiLtJ_G0016468.1 mouse_genomes_project 1 177172580 177177848 - Dhx9 protein_coding retained_intron MGP_NODShiLtJ_T0005760.1 MGP_NODShiLtJ_G0004825.1 mouse_genomes_project 1 99680126 99699942 - Gm29538 lincRNA lincRNA MGP_NODShiLtJ_T0097858.1 MGP_NODShiLtJ_G0036270.1 mouse_genomes_project 1 83149002 83149128 + Gm25329 rRNA rRNA MGP_NODShiLtJ_T0000790.1 MGP_NODShiLtJ_G0000721.1 mouse_genomes_project 1 222975525 222977780 - TEC TEC MGP_NODShiLtJ_T0101484.1 MGP_NODShiLtJ_G0039654.1 mouse_genomes_project 1 99152620 99153400 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000575.1 MGP_NODShiLtJ_G0000511.1 mouse_genomes_project 1 137372851 137381014 - TEC TEC MGP_NODShiLtJ_T0019057.1 MGP_NODShiLtJ_G0015777.1 mouse_genomes_project 1 37655981 37664674 + MGP_NODShiLtJ_P0019057 Cfc1 protein_coding protein_coding MGP_NODShiLtJ_T0012189.1 MGP_NODShiLtJ_G0010297.1 mouse_genomes_project 1 186979603 186980033 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021017.1 MGP_NODShiLtJ_G0016151.1 mouse_genomes_project 1 99336941 99344396 + MGP_NODShiLtJ_P0021017 Ugt1a1 protein_coding protein_coding MGP_NODShiLtJ_T0000617.1 MGP_NODShiLtJ_G0000553.1 mouse_genomes_project 1 152320644 152323729 - TEC TEC MGP_NODShiLtJ_T0000618.1 MGP_NODShiLtJ_G0000553.1 mouse_genomes_project 1 152323126 152323729 - TEC TEC MGP_NODShiLtJ_T0000434.1 MGP_NODShiLtJ_G0000370.1 mouse_genomes_project 1 39295008 39296380 - TEC TEC MGP_NODShiLtJ_T0000388.1 MGP_NODShiLtJ_G0000326.1 mouse_genomes_project 1 19393518 19395905 + TEC TEC MGP_NODShiLtJ_T0021579.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139006895 139031697 - MGP_NODShiLtJ_P0021579 Insig2 protein_coding protein_coding MGP_NODShiLtJ_T0021580.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139008447 139009871 - Insig2 protein_coding retained_intron MGP_NODShiLtJ_T0021581.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139008478 139031703 - MGP_NODShiLtJ_P0021581 Insig2 protein_coding protein_coding MGP_NODShiLtJ_T0021582.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139009432 139014655 - Insig2 protein_coding retained_intron MGP_NODShiLtJ_T0021583.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139009489 139031675 - MGP_NODShiLtJ_P0021583 Insig2 protein_coding protein_coding MGP_NODShiLtJ_T0021584.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139009789 139025448 - MGP_NODShiLtJ_P0021584 Insig2 protein_coding protein_coding MGP_NODShiLtJ_T0021585.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139014086 139021985 - Insig2 protein_coding retained_intron MGP_NODShiLtJ_T0021586.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139021920 139031592 - MGP_NODShiLtJ_P0021586 Insig2 protein_coding protein_coding MGP_NODShiLtJ_T0021587.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139021990 139031598 - MGP_NODShiLtJ_P0021587 Insig2 protein_coding protein_coding MGP_NODShiLtJ_T0021588.1 MGP_NODShiLtJ_G0016281.1 mouse_genomes_project 1 139022017 139036473 - MGP_NODShiLtJ_P0021588 Insig2 protein_coding protein_coding MGP_NODShiLtJ_T0023604.1 MGP_NODShiLtJ_G0016728.1 mouse_genomes_project 1 206216079 206236604 - MGP_NODShiLtJ_P0023604 protein_coding protein_coding MGP_NODShiLtJ_T0005843.1 MGP_NODShiLtJ_G0004895.1 mouse_genomes_project 1 151467684 151475002 + F730311O21Rik lincRNA lincRNA MGP_NODShiLtJ_T0022432.1 MGP_NODShiLtJ_G0016460.1 mouse_genomes_project 1 176354093 176360972 + MGP_NODShiLtJ_P0022432 Apobec4 protein_coding protein_coding MGP_NODShiLtJ_T0019590.1 MGP_NODShiLtJ_G0015877.1 mouse_genomes_project 1 59069870 59073629 + Hibch protein_coding retained_intron MGP_NODShiLtJ_T0019591.1 MGP_NODShiLtJ_G0015877.1 mouse_genomes_project 1 59069985 59114196 + Hibch protein_coding retained_intron MGP_NODShiLtJ_T0019592.1 MGP_NODShiLtJ_G0015877.1 mouse_genomes_project 1 59070051 59149213 + MGP_NODShiLtJ_P0019592 Hibch protein_coding unknown_likely_coding MGP_NODShiLtJ_T0019593.1 MGP_NODShiLtJ_G0015877.1 mouse_genomes_project 1 59076709 59087573 + Hibch protein_coding processed_transcript MGP_NODShiLtJ_T0019594.1 MGP_NODShiLtJ_G0015877.1 mouse_genomes_project 1 59093697 59128522 + Hibch protein_coding processed_transcript MGP_NODShiLtJ_T0019595.1 MGP_NODShiLtJ_G0015877.1 mouse_genomes_project 1 59129834 59142296 + Hibch protein_coding retained_intron MGP_NODShiLtJ_T0101516.1 MGP_NODShiLtJ_G0039686.1 mouse_genomes_project 1 200179673 200181053 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099738.1 MGP_NODShiLtJ_G0038132.1 mouse_genomes_project 1 14817899 14818031 + Gm25168 snoRNA snoRNA MGP_NODShiLtJ_T0023573.1 MGP_NODShiLtJ_G0016719.1 mouse_genomes_project 1 204144758 204179829 - MGP_NODShiLtJ_P0023573 Adss protein_coding protein_coding MGP_NODShiLtJ_T0023574.1 MGP_NODShiLtJ_G0016719.1 mouse_genomes_project 1 204144972 204150406 - Adss protein_coding retained_intron MGP_NODShiLtJ_T0023575.1 MGP_NODShiLtJ_G0016719.1 mouse_genomes_project 1 204156415 204179819 - Adss protein_coding retained_intron MGP_NODShiLtJ_T0019512.1 MGP_NODShiLtJ_G0015867.1 mouse_genomes_project 1 57380992 57395503 + MGP_NODShiLtJ_P0019512 Sdpr protein_coding protein_coding MGP_NODShiLtJ_T0000394.1 MGP_NODShiLtJ_G0000332.1 mouse_genomes_project 1 24378727 24379117 + TEC TEC MGP_NODShiLtJ_T0000395.1 MGP_NODShiLtJ_G0000332.1 mouse_genomes_project 1 24378729 24379117 + TEC TEC MGP_NODShiLtJ_T0011979.1 MGP_NODShiLtJ_G0010087.1 mouse_genomes_project 1 81339206 81340418 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018982.1 MGP_NODShiLtJ_G0015765.1 mouse_genomes_project 1 33714698 33719736 + MGP_NODShiLtJ_P0018982 Pih1d3 protein_coding protein_coding MGP_NODShiLtJ_T0005586.1 MGP_NODShiLtJ_G0004698.1 mouse_genomes_project 1 8009730 8011053 - Gm29520 lincRNA lincRNA MGP_NODShiLtJ_T0024080.1 MGP_NODShiLtJ_G0016823.1 mouse_genomes_project 1 220169164 220454297 - MGP_NODShiLtJ_P0024080 Hhat protein_coding protein_coding MGP_NODShiLtJ_T0024081.1 MGP_NODShiLtJ_G0016823.1 mouse_genomes_project 1 220185285 220454307 - MGP_NODShiLtJ_P0024081 Hhat protein_coding protein_coding MGP_NODShiLtJ_T0024082.1 MGP_NODShiLtJ_G0016823.1 mouse_genomes_project 1 220215544 220454302 - MGP_NODShiLtJ_P0024082 Hhat protein_coding non_stop_decay MGP_NODShiLtJ_T0024083.1 MGP_NODShiLtJ_G0016823.1 mouse_genomes_project 1 220299996 220407415 - Hhat protein_coding processed_transcript MGP_NODShiLtJ_T0024084.1 MGP_NODShiLtJ_G0016823.1 mouse_genomes_project 1 220327517 220364486 - Hhat protein_coding processed_transcript MGP_NODShiLtJ_T0024085.1 MGP_NODShiLtJ_G0016823.1 mouse_genomes_project 1 220407403 220419779 - Hhat protein_coding processed_transcript MGP_NODShiLtJ_T0024086.1 MGP_NODShiLtJ_G0016823.1 mouse_genomes_project 1 220418909 220454076 - Hhat protein_coding processed_transcript MGP_NODShiLtJ_T0018629.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6416664 7569261 - MGP_NODShiLtJ_P0018629 Sntg1 protein_coding protein_coding MGP_NODShiLtJ_T0018630.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6416664 7568596 - MGP_NODShiLtJ_P0018630 Sntg1 protein_coding protein_coding MGP_NODShiLtJ_T0018631.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6416664 7568887 - MGP_NODShiLtJ_P0018631 Sntg1 protein_coding protein_coding MGP_NODShiLtJ_T0018632.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6417867 7569902 - MGP_NODShiLtJ_P0018632 Sntg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018633.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6418372 6538428 - Sntg1 protein_coding processed_transcript MGP_NODShiLtJ_T0018634.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6418614 6538387 - Sntg1 protein_coding processed_transcript MGP_NODShiLtJ_T0018635.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6418664 6956498 - MGP_NODShiLtJ_P0018635 Sntg1 protein_coding protein_coding MGP_NODShiLtJ_T0018636.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6798720 7569305 - MGP_NODShiLtJ_P0018636 Sntg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018637.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 6925683 7569532 - Sntg1 protein_coding retained_intron MGP_NODShiLtJ_T0018638.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 7153352 7155644 - Sntg1 protein_coding retained_intron MGP_NODShiLtJ_T0018639.1 MGP_NODShiLtJ_G0015690.1 mouse_genomes_project 1 7153352 7568249 - Sntg1 protein_coding processed_transcript MGP_NODShiLtJ_T0024018.1 MGP_NODShiLtJ_G0016809.1 mouse_genomes_project 1 218792332 218794566 - MGP_NODShiLtJ_P0024018 Fam71a protein_coding protein_coding MGP_NODShiLtJ_T0000660.1 MGP_NODShiLtJ_G0000594.1 mouse_genomes_project 1 172642982 172647967 - TEC TEC MGP_NODShiLtJ_T0023969.1 MGP_NODShiLtJ_G0016800.1 mouse_genomes_project 1 217639165 217694941 - MGP_NODShiLtJ_P0023969 Prox1 protein_coding protein_coding MGP_NODShiLtJ_T0023970.1 MGP_NODShiLtJ_G0016800.1 mouse_genomes_project 1 217643579 217693621 - MGP_NODShiLtJ_P0023970 Prox1 protein_coding protein_coding MGP_NODShiLtJ_T0023971.1 MGP_NODShiLtJ_G0016800.1 mouse_genomes_project 1 217644136 217694907 - MGP_NODShiLtJ_P0023971 Prox1 protein_coding protein_coding MGP_NODShiLtJ_T0101513.1 MGP_NODShiLtJ_G0039683.1 mouse_genomes_project 1 200079273 200079739 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0023144.1 MGP_NODShiLtJ_G0016606.1 mouse_genomes_project 1 196316825 196326905 - MGP_NODShiLtJ_P0023144 Fcrla protein_coding protein_coding MGP_NODShiLtJ_T0023145.1 MGP_NODShiLtJ_G0016606.1 mouse_genomes_project 1 196317124 196321098 - MGP_NODShiLtJ_P0023145 Fcrla protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023146.1 MGP_NODShiLtJ_G0016606.1 mouse_genomes_project 1 196317131 196326905 - MGP_NODShiLtJ_P0023146 Fcrla protein_coding protein_coding MGP_NODShiLtJ_T0023147.1 MGP_NODShiLtJ_G0016606.1 mouse_genomes_project 1 196319613 196326877 - MGP_NODShiLtJ_P0023147 Fcrla protein_coding protein_coding MGP_NODShiLtJ_T0023148.1 MGP_NODShiLtJ_G0016606.1 mouse_genomes_project 1 196320326 196326882 - MGP_NODShiLtJ_P0023148 Fcrla protein_coding protein_coding MGP_NODShiLtJ_T0023149.1 MGP_NODShiLtJ_G0016606.1 mouse_genomes_project 1 196320346 196326856 - Fcrla protein_coding processed_transcript MGP_NODShiLtJ_T0021765.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150137560 150156508 + Eif2d protein_coding retained_intron MGP_NODShiLtJ_T0021766.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150137560 150172509 + MGP_NODShiLtJ_P0021766 Eif2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021767.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150137560 150184935 + MGP_NODShiLtJ_P0021767 Eif2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021768.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150137560 150171135 + MGP_NODShiLtJ_P0021768 Eif2d protein_coding protein_coding MGP_NODShiLtJ_T0021769.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150137560 150177269 + MGP_NODShiLtJ_P0021769 Eif2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021770.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150137560 150169896 + MGP_NODShiLtJ_P0021770 Eif2d protein_coding protein_coding MGP_NODShiLtJ_T0021771.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150137560 150177683 + MGP_NODShiLtJ_P0021771 Eif2d protein_coding protein_coding MGP_NODShiLtJ_T0021772.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150137749 150171028 + MGP_NODShiLtJ_P0021772 Eif2d protein_coding unknown_likely_coding MGP_NODShiLtJ_T0021773.1 MGP_NODShiLtJ_G0016322.1 mouse_genomes_project 1 150164035 150169167 + Eif2d protein_coding processed_transcript MGP_NODShiLtJ_T0009410.1 MGP_NODShiLtJ_G0007543.1 mouse_genomes_project 1 83642460 83642527 - Mir1928 miRNA miRNA MGP_NODShiLtJ_T0000787.1 MGP_NODShiLtJ_G0000718.1 mouse_genomes_project 1 222884983 222889106 + TEC TEC MGP_NODShiLtJ_T0020315.1 MGP_NODShiLtJ_G0016016.1 mouse_genomes_project 1 83852703 83858008 + MGP_NODShiLtJ_P0020315 Ctdsp1 protein_coding protein_coding MGP_NODShiLtJ_T0020316.1 MGP_NODShiLtJ_G0016016.1 mouse_genomes_project 1 83853337 83855259 + MGP_NODShiLtJ_P0020316 Ctdsp1 protein_coding protein_coding MGP_NODShiLtJ_T0022002.1 MGP_NODShiLtJ_G0016373.1 mouse_genomes_project 1 153519009 153558250 - MGP_NODShiLtJ_P0022002 Adora1 protein_coding protein_coding MGP_NODShiLtJ_T0022003.1 MGP_NODShiLtJ_G0016373.1 mouse_genomes_project 1 153519011 153559103 - MGP_NODShiLtJ_P0022003 Adora1 protein_coding protein_coding MGP_NODShiLtJ_T0022004.1 MGP_NODShiLtJ_G0016373.1 mouse_genomes_project 1 153521135 153559069 - MGP_NODShiLtJ_P0022004 Adora1 protein_coding protein_coding MGP_NODShiLtJ_T0022005.1 MGP_NODShiLtJ_G0016373.1 mouse_genomes_project 1 153523183 153559036 - MGP_NODShiLtJ_P0022005 Adora1 protein_coding protein_coding MGP_NODShiLtJ_T0022054.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154131815 154356814 - MGP_NODShiLtJ_P0022054 Ppp1r12b protein_coding protein_coding MGP_NODShiLtJ_T0022055.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154132720 154137539 - Ppp1r12b protein_coding processed_transcript MGP_NODShiLtJ_T0022056.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154136250 154232140 - Ppp1r12b protein_coding processed_transcript MGP_NODShiLtJ_T0022057.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154137154 154356725 - MGP_NODShiLtJ_P0022057 Ppp1r12b protein_coding protein_coding MGP_NODShiLtJ_T0022058.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154143094 154356814 - MGP_NODShiLtJ_P0022058 Ppp1r12b protein_coding protein_coding MGP_NODShiLtJ_T0022059.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154157818 154186009 - Ppp1r12b protein_coding retained_intron MGP_NODShiLtJ_T0022060.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154161458 154163839 - Ppp1r12b protein_coding retained_intron MGP_NODShiLtJ_T0022061.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154219758 154221517 - Ppp1r12b protein_coding processed_transcript MGP_NODShiLtJ_T0022062.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154219761 154356802 - Ppp1r12b protein_coding retained_intron MGP_NODShiLtJ_T0022063.1 MGP_NODShiLtJ_G0016385.1 mouse_genomes_project 1 154344177 154356816 - MGP_NODShiLtJ_P0022063 Ppp1r12b protein_coding protein_coding MGP_NODShiLtJ_T0000520.1 MGP_NODShiLtJ_G0000456.1 mouse_genomes_project 1 90655255 90660184 - TEC TEC MGP_NODShiLtJ_T0020240.1 MGP_NODShiLtJ_G0016000.1 mouse_genomes_project 1 81939865 82003445 - MGP_NODShiLtJ_P0020240 Ankar protein_coding protein_coding MGP_NODShiLtJ_T0022504.1 MGP_NODShiLtJ_G0016474.1 mouse_genomes_project 1 177592436 177653227 - MGP_NODShiLtJ_P0022504 Teddm2 protein_coding protein_coding MGP_NODShiLtJ_T0022505.1 MGP_NODShiLtJ_G0016474.1 mouse_genomes_project 1 177592436 177594090 - MGP_NODShiLtJ_P0022505 Teddm2 protein_coding protein_coding MGP_NODShiLtJ_T0022507.1 MGP_NODShiLtJ_G0016474.1 mouse_genomes_project 1 177650123 177653247 - Teddm2 protein_coding retained_intron MGP_NODShiLtJ_T0019763.1 MGP_NODShiLtJ_G0015913.1 mouse_genomes_project 1 65256839 65358235 + MGP_NODShiLtJ_P0019763 Aox2 protein_coding protein_coding MGP_NODShiLtJ_T0019764.1 MGP_NODShiLtJ_G0015913.1 mouse_genomes_project 1 65261032 65353450 + MGP_NODShiLtJ_P0019764 Aox2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023380.1 MGP_NODShiLtJ_G0016654.1 mouse_genomes_project 1 197885923 197894592 - MGP_NODShiLtJ_P0023380 Kcnj9 protein_coding protein_coding MGP_NODShiLtJ_T0023381.1 MGP_NODShiLtJ_G0016654.1 mouse_genomes_project 1 197887523 197894556 - MGP_NODShiLtJ_P0023381 Kcnj9 protein_coding protein_coding MGP_NODShiLtJ_T0023382.1 MGP_NODShiLtJ_G0016654.1 mouse_genomes_project 1 197890579 197893381 - Kcnj9 protein_coding retained_intron MGP_NODShiLtJ_T0022952.1 MGP_NODShiLtJ_G0016559.1 mouse_genomes_project 1 190153497 190173924 - MGP_NODShiLtJ_P0022952 Sft2d2 protein_coding protein_coding MGP_NODShiLtJ_T0022953.1 MGP_NODShiLtJ_G0016559.1 mouse_genomes_project 1 190155030 190173807 - MGP_NODShiLtJ_P0022953 Sft2d2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022954.1 MGP_NODShiLtJ_G0016559.1 mouse_genomes_project 1 190158368 190173803 - MGP_NODShiLtJ_P0022954 Sft2d2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022631.1 MGP_NODShiLtJ_G0016497.1 mouse_genomes_project 1 180616034 180660745 - MGP_NODShiLtJ_P0022631 Fam20b protein_coding protein_coding MGP_NODShiLtJ_T0022632.1 MGP_NODShiLtJ_G0016497.1 mouse_genomes_project 1 180616073 180660759 - MGP_NODShiLtJ_P0022632 Fam20b protein_coding protein_coding MGP_NODShiLtJ_T0022633.1 MGP_NODShiLtJ_G0016497.1 mouse_genomes_project 1 180624513 180638391 - Fam20b protein_coding retained_intron MGP_NODShiLtJ_T0022634.1 MGP_NODShiLtJ_G0016497.1 mouse_genomes_project 1 180638236 180643301 - Fam20b protein_coding processed_transcript MGP_NODShiLtJ_T0022635.1 MGP_NODShiLtJ_G0016497.1 mouse_genomes_project 1 180641146 180658591 - Fam20b protein_coding retained_intron MGP_NODShiLtJ_T0022883.1 MGP_NODShiLtJ_G0016540.1 mouse_genomes_project 1 188023901 188093563 - MGP_NODShiLtJ_P0022883 Prrx1 protein_coding protein_coding MGP_NODShiLtJ_T0022884.1 MGP_NODShiLtJ_G0016540.1 mouse_genomes_project 1 188023901 188093525 - MGP_NODShiLtJ_P0022884 Prrx1 protein_coding protein_coding MGP_NODShiLtJ_T0022885.1 MGP_NODShiLtJ_G0016540.1 mouse_genomes_project 1 188026390 188069176 - Prrx1 protein_coding processed_transcript MGP_NODShiLtJ_T0022886.1 MGP_NODShiLtJ_G0016540.1 mouse_genomes_project 1 188031665 188093521 - MGP_NODShiLtJ_P0022886 Prrx1 protein_coding protein_coding MGP_NODShiLtJ_T0022887.1 MGP_NODShiLtJ_G0016540.1 mouse_genomes_project 1 188061810 188093524 - Prrx1 protein_coding retained_intron MGP_NODShiLtJ_T0005856.1 MGP_NODShiLtJ_G0004908.1 mouse_genomes_project 1 156216237 156234195 + Gm19705 lincRNA lincRNA MGP_NODShiLtJ_T0005857.1 MGP_NODShiLtJ_G0004908.1 mouse_genomes_project 1 156221935 156228194 + Gm19705 lincRNA lincRNA MGP_NODShiLtJ_T0005858.1 MGP_NODShiLtJ_G0004908.1 mouse_genomes_project 1 156228862 156237677 + Gm19705 lincRNA lincRNA MGP_NODShiLtJ_T0005859.1 MGP_NODShiLtJ_G0004908.1 mouse_genomes_project 1 156229095 156237675 + Gm19705 lincRNA lincRNA MGP_NODShiLtJ_T0020408.1 MGP_NODShiLtJ_G0016036.1 mouse_genomes_project 1 84552996 84561351 - MGP_NODShiLtJ_P0020408 Slc23a3 protein_coding protein_coding MGP_NODShiLtJ_T0020409.1 MGP_NODShiLtJ_G0016036.1 mouse_genomes_project 1 84559172 84561007 - Slc23a3 protein_coding retained_intron MGP_NODShiLtJ_T0022720.1 MGP_NODShiLtJ_G0016511.1 mouse_genomes_project 1 184559518 184564124 + MGP_NODShiLtJ_P0022720 Mrps14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022721.1 MGP_NODShiLtJ_G0016511.1 mouse_genomes_project 1 184559518 184567584 + MGP_NODShiLtJ_P0022721 Mrps14 protein_coding protein_coding MGP_NODShiLtJ_T0022722.1 MGP_NODShiLtJ_G0016511.1 mouse_genomes_project 1 184559606 184564116 + MGP_NODShiLtJ_P0022722 Mrps14 protein_coding protein_coding MGP_NODShiLtJ_T0011760.1 MGP_NODShiLtJ_G0009868.1 mouse_genomes_project 1 6536333 6536733 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023157.1 MGP_NODShiLtJ_G0016608.1 mouse_genomes_project 1 196417182 196428153 + MGP_NODShiLtJ_P0023157 Fcgr4 protein_coding protein_coding MGP_NODShiLtJ_T0023715.1 MGP_NODShiLtJ_G0016747.1 mouse_genomes_project 1 207801808 207807647 + MGP_NODShiLtJ_P0023715 Lefty1 protein_coding protein_coding MGP_NODShiLtJ_T0023716.1 MGP_NODShiLtJ_G0016747.1 mouse_genomes_project 1 207804773 207807057 + Lefty1 protein_coding retained_intron MGP_NODShiLtJ_T0023170.1 MGP_NODShiLtJ_G0016611.1 mouse_genomes_project 1 196582755 196606743 - MGP_NODShiLtJ_P0023170 Sdhc protein_coding protein_coding MGP_NODShiLtJ_T0023171.1 MGP_NODShiLtJ_G0016611.1 mouse_genomes_project 1 196584988 196606731 - MGP_NODShiLtJ_P0023171 Sdhc protein_coding protein_coding MGP_NODShiLtJ_T0023172.1 MGP_NODShiLtJ_G0016611.1 mouse_genomes_project 1 196594957 196606728 - MGP_NODShiLtJ_P0023172 Sdhc protein_coding protein_coding MGP_NODShiLtJ_T0005860.1 MGP_NODShiLtJ_G0004909.1 mouse_genomes_project 1 156243076 156280721 + Platr22 lincRNA lincRNA MGP_NODShiLtJ_T0011132.1 MGP_NODShiLtJ_G0009265.1 mouse_genomes_project 1 52709572 52709842 - Gm23829 misc_RNA misc_RNA MGP_NODShiLtJ_T0016959.1 MGP_NODShiLtJ_G0014992.1 mouse_genomes_project 1 190801989 190811294 + Gm16565 processed_transcript sense_overlapping MGP_NODShiLtJ_T0016960.1 MGP_NODShiLtJ_G0014992.1 mouse_genomes_project 1 190802113 190803082 + Gm16565 processed_transcript processed_transcript MGP_NODShiLtJ_T0005772.1 MGP_NODShiLtJ_G0004836.1 mouse_genomes_project 1 101630479 101633934 + Gm28723 lincRNA lincRNA MGP_NODShiLtJ_T0011939.1 MGP_NODShiLtJ_G0010047.1 mouse_genomes_project 1 67845091 67845508 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005903.1 MGP_NODShiLtJ_G0004942.1 mouse_genomes_project 1 186537216 186552736 + Gm31925 lincRNA lincRNA MGP_NODShiLtJ_T0005904.1 MGP_NODShiLtJ_G0004942.1 mouse_genomes_project 1 186543935 186554962 + Gm31925 lincRNA lincRNA MGP_NODShiLtJ_T0019690.1 MGP_NODShiLtJ_G0015898.1 mouse_genomes_project 1 61884944 61949206 - MGP_NODShiLtJ_P0019690 Rftn2 protein_coding protein_coding MGP_NODShiLtJ_T0019691.1 MGP_NODShiLtJ_G0015898.1 mouse_genomes_project 1 61886533 61949206 - MGP_NODShiLtJ_P0019691 Rftn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019692.1 MGP_NODShiLtJ_G0015898.1 mouse_genomes_project 1 61921192 61949206 - MGP_NODShiLtJ_P0019692 Rftn2 protein_coding protein_coding MGP_NODShiLtJ_T0019693.1 MGP_NODShiLtJ_G0015898.1 mouse_genomes_project 1 61923478 61926606 - Rftn2 protein_coding processed_transcript MGP_NODShiLtJ_T0019694.1 MGP_NODShiLtJ_G0015898.1 mouse_genomes_project 1 61946366 61949206 - Rftn2 protein_coding processed_transcript MGP_NODShiLtJ_T0018678.1 MGP_NODShiLtJ_G0015700.1 mouse_genomes_project 1 8456667 8470195 - MGP_NODShiLtJ_P0018678 Cops5 protein_coding protein_coding MGP_NODShiLtJ_T0018679.1 MGP_NODShiLtJ_G0015700.1 mouse_genomes_project 1 8456909 8467196 - MGP_NODShiLtJ_P0018679 Cops5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018680.1 MGP_NODShiLtJ_G0015700.1 mouse_genomes_project 1 8459264 8470009 - MGP_NODShiLtJ_P0018680 Cops5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018681.1 MGP_NODShiLtJ_G0015700.1 mouse_genomes_project 1 8462757 8470217 - MGP_NODShiLtJ_P0018681 Cops5 protein_coding protein_coding MGP_NODShiLtJ_T0018682.1 MGP_NODShiLtJ_G0015700.1 mouse_genomes_project 1 8462987 8470006 - Cops5 protein_coding retained_intron MGP_NODShiLtJ_T0018683.1 MGP_NODShiLtJ_G0015700.1 mouse_genomes_project 1 8465107 8470236 - Cops5 protein_coding retained_intron MGP_NODShiLtJ_T0018684.1 MGP_NODShiLtJ_G0015700.1 mouse_genomes_project 1 8469347 8470013 - Cops5 protein_coding retained_intron MGP_NODShiLtJ_T0101263.1 MGP_NODShiLtJ_G0039545.1 mouse_genomes_project 1 199205133 199208567 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0011738.1 MGP_NODShiLtJ_G0009846.1 mouse_genomes_project 1 2144141 2144772 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000727.1 MGP_NODShiLtJ_G0000661.1 mouse_genomes_project 1 202160169 202162101 - TEC TEC MGP_NODShiLtJ_T0099823.1 MGP_NODShiLtJ_G0038217.1 mouse_genomes_project 1 190576086 190576213 - Gm23208 snoRNA snoRNA MGP_NODShiLtJ_T0005698.1 MGP_NODShiLtJ_G0004779.1 mouse_genomes_project 1 70875527 70881799 - Gm11608 lincRNA lincRNA MGP_NODShiLtJ_T0005699.1 MGP_NODShiLtJ_G0004779.1 mouse_genomes_project 1 70875527 70881794 - Gm11608 lincRNA lincRNA MGP_NODShiLtJ_T0011948.1 MGP_NODShiLtJ_G0010056.1 mouse_genomes_project 1 68969681 68970071 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005834.1 MGP_NODShiLtJ_G0004887.1 mouse_genomes_project 1 143845128 143847958 + Gm28706 lincRNA lincRNA MGP_NODShiLtJ_T0005694.1 MGP_NODShiLtJ_G0004777.1 mouse_genomes_project 1 70671681 70677975 + Ino80dos lincRNA lincRNA MGP_NODShiLtJ_T0005695.1 MGP_NODShiLtJ_G0004777.1 mouse_genomes_project 1 70677485 70726787 + Ino80dos lincRNA lincRNA MGP_NODShiLtJ_T0005696.1 MGP_NODShiLtJ_G0004777.1 mouse_genomes_project 1 70677754 70724786 + Ino80dos lincRNA lincRNA MGP_NODShiLtJ_T0023041.1 MGP_NODShiLtJ_G0016574.1 mouse_genomes_project 1 191414302 191428717 + MGP_NODShiLtJ_P0023041 Tada1 protein_coding protein_coding MGP_NODShiLtJ_T0023042.1 MGP_NODShiLtJ_G0016574.1 mouse_genomes_project 1 191414522 191424011 + Tada1 protein_coding retained_intron MGP_NODShiLtJ_T0023043.1 MGP_NODShiLtJ_G0016574.1 mouse_genomes_project 1 191414529 191419314 + Tada1 protein_coding retained_intron MGP_NODShiLtJ_T0023044.1 MGP_NODShiLtJ_G0016574.1 mouse_genomes_project 1 191414544 191417676 + MGP_NODShiLtJ_P0023044 Tada1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021905.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152137578 152211620 - MGP_NODShiLtJ_P0021905 Mdm4 protein_coding protein_coding MGP_NODShiLtJ_T0021906.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152139747 152150652 - Mdm4 protein_coding processed_transcript MGP_NODShiLtJ_T0021907.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152164003 152211698 - MGP_NODShiLtJ_P0021907 Mdm4 protein_coding protein_coding MGP_NODShiLtJ_T0021908.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152168470 152211630 - MGP_NODShiLtJ_P0021908 Mdm4 protein_coding protein_coding MGP_NODShiLtJ_T0021909.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152169027 152211639 - MGP_NODShiLtJ_P0021909 Mdm4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021910.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152169842 152211636 - MGP_NODShiLtJ_P0021910 Mdm4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021911.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152169969 152211638 - MGP_NODShiLtJ_P0021911 Mdm4 protein_coding protein_coding MGP_NODShiLtJ_T0021912.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152175256 152203612 - Mdm4 protein_coding processed_transcript MGP_NODShiLtJ_T0021913.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152175259 152182757 - Mdm4 protein_coding retained_intron MGP_NODShiLtJ_T0021914.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152178061 152180018 - Mdm4 protein_coding retained_intron MGP_NODShiLtJ_T0021915.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152179766 152182560 - Mdm4 protein_coding retained_intron MGP_NODShiLtJ_T0021916.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152187502 152211612 - Mdm4 protein_coding retained_intron MGP_NODShiLtJ_T0021917.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152187556 152216013 - MGP_NODShiLtJ_P0021917 Mdm4 protein_coding protein_coding MGP_NODShiLtJ_T0021918.1 MGP_NODShiLtJ_G0016350.1 mouse_genomes_project 1 152195807 152211620 - Mdm4 protein_coding retained_intron MGP_NODShiLtJ_T0005839.1 MGP_NODShiLtJ_G0004891.1 mouse_genomes_project 1 149717918 149741936 + Gm28856 lincRNA lincRNA MGP_NODShiLtJ_T0012033.1 MGP_NODShiLtJ_G0010141.1 mouse_genomes_project 1 111128834 111129122 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018559.1 MGP_NODShiLtJ_G0015679.1 mouse_genomes_project 1 2223448 2274940 + MGP_NODShiLtJ_P0018559 Lypla1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018560.1 MGP_NODShiLtJ_G0015679.1 mouse_genomes_project 1 2223483 2272122 + MGP_NODShiLtJ_P0018560 Lypla1 protein_coding protein_coding MGP_NODShiLtJ_T0018561.1 MGP_NODShiLtJ_G0015679.1 mouse_genomes_project 1 2223490 2266669 + MGP_NODShiLtJ_P0018561 Lypla1 protein_coding protein_coding MGP_NODShiLtJ_T0018563.1 MGP_NODShiLtJ_G0015679.1 mouse_genomes_project 1 2223556 2270557 + MGP_NODShiLtJ_P0018563 Lypla1 protein_coding protein_coding MGP_NODShiLtJ_T0018564.1 MGP_NODShiLtJ_G0015679.1 mouse_genomes_project 1 2223558 2266352 + MGP_NODShiLtJ_P0018564 Lypla1 protein_coding protein_coding MGP_NODShiLtJ_T0018565.1 MGP_NODShiLtJ_G0015679.1 mouse_genomes_project 1 2223571 2270735 + MGP_NODShiLtJ_P0018565 Lypla1 protein_coding protein_coding MGP_NODShiLtJ_T0018566.1 MGP_NODShiLtJ_G0015679.1 mouse_genomes_project 1 2223601 2272123 + MGP_NODShiLtJ_P0018566 Lypla1 protein_coding protein_coding MGP_NODShiLtJ_T0018567.1 MGP_NODShiLtJ_G0015679.1 mouse_genomes_project 1 2262287 2268210 + Lypla1 protein_coding retained_intron MGP_NODShiLtJ_T0018882.1 MGP_NODShiLtJ_G0015740.1 mouse_genomes_project 1 20840184 20845011 + Efhc1 protein_coding processed_transcript MGP_NODShiLtJ_T0018883.1 MGP_NODShiLtJ_G0015740.1 mouse_genomes_project 1 20840246 20882535 + MGP_NODShiLtJ_P0018883 Efhc1 protein_coding protein_coding MGP_NODShiLtJ_T0023385.1 MGP_NODShiLtJ_G0016657.1 mouse_genomes_project 1 198050387 198053603 + MGP_NODShiLtJ_P0023385 Slamf9 protein_coding protein_coding MGP_NODShiLtJ_T0012163.1 MGP_NODShiLtJ_G0010271.1 mouse_genomes_project 1 175036887 175037756 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000416.1 MGP_NODShiLtJ_G0000353.1 mouse_genomes_project 1 33282882 33285743 - TEC TEC MGP_NODShiLtJ_T0022212.1 MGP_NODShiLtJ_G0016416.1 mouse_genomes_project 1 156422356 156549369 - MGP_NODShiLtJ_P0022212 Nr5a2 protein_coding protein_coding MGP_NODShiLtJ_T0022213.1 MGP_NODShiLtJ_G0016416.1 mouse_genomes_project 1 156425016 156533600 - MGP_NODShiLtJ_P0022213 Nr5a2 protein_coding protein_coding MGP_NODShiLtJ_T0022214.1 MGP_NODShiLtJ_G0016416.1 mouse_genomes_project 1 156426054 156549301 - MGP_NODShiLtJ_P0022214 Nr5a2 protein_coding protein_coding MGP_NODShiLtJ_T0022215.1 MGP_NODShiLtJ_G0016416.1 mouse_genomes_project 1 156426203 156538162 - MGP_NODShiLtJ_P0022215 Nr5a2 protein_coding protein_coding MGP_NODShiLtJ_T0022216.1 MGP_NODShiLtJ_G0016416.1 mouse_genomes_project 1 156470936 156524621 - Nr5a2 protein_coding retained_intron MGP_NODShiLtJ_T0022217.1 MGP_NODShiLtJ_G0016416.1 mouse_genomes_project 1 156525022 156533211 - MGP_NODShiLtJ_P0022217 Nr5a2 protein_coding protein_coding MGP_NODShiLtJ_T0018926.1 MGP_NODShiLtJ_G0015753.1 mouse_genomes_project 1 24369176 24378879 - MGP_NODShiLtJ_P0018926 Sdhaf4 protein_coding protein_coding MGP_NODShiLtJ_T0018927.1 MGP_NODShiLtJ_G0015753.1 mouse_genomes_project 1 24376183 24378853 - Sdhaf4 protein_coding processed_transcript MGP_NODShiLtJ_T0000477.1 MGP_NODShiLtJ_G0000413.1 mouse_genomes_project 1 68225146 68226545 + TEC TEC MGP_NODShiLtJ_T0005740.1 MGP_NODShiLtJ_G0004809.1 mouse_genomes_project 1 88320121 88337755 - 5730419F03Rik lincRNA lincRNA MGP_NODShiLtJ_T0101479.1 MGP_NODShiLtJ_G0039649.1 mouse_genomes_project 1 98952780 98953629 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011850.1 MGP_NODShiLtJ_G0009958.1 mouse_genomes_project 1 37886483 37887866 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019865.1 MGP_NODShiLtJ_G0015929.1 mouse_genomes_project 1 66299347 66375349 - MGP_NODShiLtJ_P0019865 Als2 protein_coding protein_coding MGP_NODShiLtJ_T0019866.1 MGP_NODShiLtJ_G0015929.1 mouse_genomes_project 1 66300504 66375211 - MGP_NODShiLtJ_P0019866 Als2 protein_coding protein_coding MGP_NODShiLtJ_T0019867.1 MGP_NODShiLtJ_G0015929.1 mouse_genomes_project 1 66328681 66375349 - Als2 protein_coding retained_intron MGP_NODShiLtJ_T0019868.1 MGP_NODShiLtJ_G0015929.1 mouse_genomes_project 1 66353792 66375344 - MGP_NODShiLtJ_P0019868 Als2 protein_coding protein_coding MGP_NODShiLtJ_T0019869.1 MGP_NODShiLtJ_G0015929.1 mouse_genomes_project 1 66354483 66357263 - Als2 protein_coding retained_intron MGP_NODShiLtJ_T0019471.1 MGP_NODShiLtJ_G0015858.1 mouse_genomes_project 1 49604999 49623354 + Col3a1 protein_coding retained_intron MGP_NODShiLtJ_T0019472.1 MGP_NODShiLtJ_G0015858.1 mouse_genomes_project 1 49604999 49649957 + MGP_NODShiLtJ_P0019472 Col3a1 protein_coding protein_coding MGP_NODShiLtJ_T0019473.1 MGP_NODShiLtJ_G0015858.1 mouse_genomes_project 1 49605108 49611133 + Col3a1 protein_coding processed_transcript MGP_NODShiLtJ_T0019474.1 MGP_NODShiLtJ_G0015858.1 mouse_genomes_project 1 49626988 49628300 + Col3a1 protein_coding retained_intron MGP_NODShiLtJ_T0019475.1 MGP_NODShiLtJ_G0015858.1 mouse_genomes_project 1 49634486 49637586 + Col3a1 protein_coding retained_intron MGP_NODShiLtJ_T0019476.1 MGP_NODShiLtJ_G0015858.1 mouse_genomes_project 1 49636054 49640751 + MGP_NODShiLtJ_P0019476 Col3a1 protein_coding protein_coding MGP_NODShiLtJ_T0019477.1 MGP_NODShiLtJ_G0015858.1 mouse_genomes_project 1 49640034 49647843 + MGP_NODShiLtJ_P0019477 Col3a1 protein_coding protein_coding MGP_NODShiLtJ_T0021268.1 MGP_NODShiLtJ_G0016210.1 mouse_genomes_project 1 104906520 104938348 + MGP_NODShiLtJ_P0021268 Ano7 protein_coding protein_coding MGP_NODShiLtJ_T0021269.1 MGP_NODShiLtJ_G0016210.1 mouse_genomes_project 1 104906520 104937444 + MGP_NODShiLtJ_P0021269 Ano7 protein_coding protein_coding MGP_NODShiLtJ_T0021270.1 MGP_NODShiLtJ_G0016210.1 mouse_genomes_project 1 104935901 104937614 + MGP_NODShiLtJ_P0021270 Ano7 protein_coding protein_coding MGP_NODShiLtJ_T0005804.1 MGP_NODShiLtJ_G0004865.1 mouse_genomes_project 1 122741451 122770565 + D830032E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0005805.1 MGP_NODShiLtJ_G0004865.1 mouse_genomes_project 1 122741477 122770578 + D830032E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0005806.1 MGP_NODShiLtJ_G0004865.1 mouse_genomes_project 1 122756478 122856284 + D830032E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0022948.1 MGP_NODShiLtJ_G0016558.1 mouse_genomes_project 1 190116471 190142186 - MGP_NODShiLtJ_P0022948 Tbx19 protein_coding protein_coding MGP_NODShiLtJ_T0022949.1 MGP_NODShiLtJ_G0016558.1 mouse_genomes_project 1 190117505 190129842 - Tbx19 protein_coding processed_transcript MGP_NODShiLtJ_T0022950.1 MGP_NODShiLtJ_G0016558.1 mouse_genomes_project 1 190117563 190135165 - MGP_NODShiLtJ_P0022950 Tbx19 protein_coding protein_coding MGP_NODShiLtJ_T0022951.1 MGP_NODShiLtJ_G0016558.1 mouse_genomes_project 1 190121025 190129527 - Tbx19 protein_coding processed_transcript MGP_NODShiLtJ_T0005658.1 MGP_NODShiLtJ_G0004748.1 mouse_genomes_project 1 51648647 51649595 - Gm28151 lincRNA lincRNA MGP_NODShiLtJ_T0023678.1 MGP_NODShiLtJ_G0016738.1 mouse_genomes_project 1 207242400 207298138 - MGP_NODShiLtJ_P0023678 Stum protein_coding protein_coding MGP_NODShiLtJ_T0023679.1 MGP_NODShiLtJ_G0016738.1 mouse_genomes_project 1 207250845 207298175 - MGP_NODShiLtJ_P0023679 Stum protein_coding protein_coding MGP_NODShiLtJ_T0021715.1 MGP_NODShiLtJ_G0016306.1 mouse_genomes_project 1 149340146 149371425 - MGP_NODShiLtJ_P0021715 protein_coding protein_coding MGP_NODShiLtJ_T0023487.1 MGP_NODShiLtJ_G0016703.1 mouse_genomes_project 1 200588749 200956466 + MGP_NODShiLtJ_P0023487 Fmn2 protein_coding protein_coding MGP_NODShiLtJ_T0023488.1 MGP_NODShiLtJ_G0016703.1 mouse_genomes_project 1 200627183 200676997 + Fmn2 protein_coding processed_transcript MGP_NODShiLtJ_T0023489.1 MGP_NODShiLtJ_G0016703.1 mouse_genomes_project 1 200705547 200711586 + Fmn2 protein_coding processed_transcript MGP_NODShiLtJ_T0023490.1 MGP_NODShiLtJ_G0016703.1 mouse_genomes_project 1 200705548 200809104 + MGP_NODShiLtJ_P0023490 Fmn2 protein_coding protein_coding MGP_NODShiLtJ_T0023491.1 MGP_NODShiLtJ_G0016703.1 mouse_genomes_project 1 200708300 200815674 + Fmn2 protein_coding retained_intron MGP_NODShiLtJ_T0023492.1 MGP_NODShiLtJ_G0016703.1 mouse_genomes_project 1 200825672 200955005 + Fmn2 protein_coding processed_transcript MGP_NODShiLtJ_T0018980.1 MGP_NODShiLtJ_G0015764.1 mouse_genomes_project 1 33664477 33697300 + MGP_NODShiLtJ_P0018980 Lgsn protein_coding protein_coding MGP_NODShiLtJ_T0018981.1 MGP_NODShiLtJ_G0015764.1 mouse_genomes_project 1 33680731 33697300 + MGP_NODShiLtJ_P0018981 Lgsn protein_coding protein_coding MGP_NODShiLtJ_T0098172.1 MGP_NODShiLtJ_G0036584.1 mouse_genomes_project 1 183647563 183647703 + Scarna3a scaRNA scaRNA MGP_NODShiLtJ_T0023709.1 MGP_NODShiLtJ_G0016745.1 mouse_genomes_project 1 207758803 207764799 + MGP_NODShiLtJ_P0023709 Lefty2 protein_coding protein_coding MGP_NODShiLtJ_T0023710.1 MGP_NODShiLtJ_G0016745.1 mouse_genomes_project 1 207760153 207763183 + Lefty2 protein_coding retained_intron MGP_NODShiLtJ_T0019430.1 MGP_NODShiLtJ_G0015850.1 mouse_genomes_project 1 48059331 48069930 - MGP_NODShiLtJ_P0019430 Mettl21c protein_coding protein_coding MGP_NODShiLtJ_T0019431.1 MGP_NODShiLtJ_G0015850.1 mouse_genomes_project 1 48059858 48067392 - Mettl21c protein_coding processed_transcript MGP_NODShiLtJ_T0019432.1 MGP_NODShiLtJ_G0015850.1 mouse_genomes_project 1 48060433 48069958 - Mettl21c protein_coding retained_intron MGP_NODShiLtJ_T0012229.1 MGP_NODShiLtJ_G0010337.1 mouse_genomes_project 1 207971310 207972447 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023902.1 MGP_NODShiLtJ_G0016789.1 mouse_genomes_project 1 213968287 213987399 - MGP_NODShiLtJ_P0023902 Rrp15 protein_coding protein_coding MGP_NODShiLtJ_T0023903.1 MGP_NODShiLtJ_G0016789.1 mouse_genomes_project 1 213968401 213987366 - Rrp15 protein_coding retained_intron MGP_NODShiLtJ_T0005770.1 MGP_NODShiLtJ_G0004834.1 mouse_genomes_project 1 101494681 101502508 + 4930434B07Rik lincRNA lincRNA MGP_NODShiLtJ_T0022447.1 MGP_NODShiLtJ_G0016464.1 mouse_genomes_project 1 176576601 176762310 + MGP_NODShiLtJ_P0022447 Nmnat2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022448.1 MGP_NODShiLtJ_G0016464.1 mouse_genomes_project 1 176576606 176762407 + MGP_NODShiLtJ_P0022448 Nmnat2 protein_coding protein_coding MGP_NODShiLtJ_T0022449.1 MGP_NODShiLtJ_G0016464.1 mouse_genomes_project 1 176576649 176734512 + MGP_NODShiLtJ_P0022449 Nmnat2 protein_coding protein_coding MGP_NODShiLtJ_T0022450.1 MGP_NODShiLtJ_G0016464.1 mouse_genomes_project 1 176576882 176718678 + Nmnat2 protein_coding processed_transcript MGP_NODShiLtJ_T0022451.1 MGP_NODShiLtJ_G0016464.1 mouse_genomes_project 1 176665012 176715982 + Nmnat2 protein_coding retained_intron MGP_NODShiLtJ_T0022452.1 MGP_NODShiLtJ_G0016464.1 mouse_genomes_project 1 176733905 176735021 + Nmnat2 protein_coding processed_transcript MGP_NODShiLtJ_T0012011.1 MGP_NODShiLtJ_G0010119.1 mouse_genomes_project 1 97172535 97172883 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022893.1 MGP_NODShiLtJ_G0016543.1 mouse_genomes_project 1 188598938 188743439 + MGP_NODShiLtJ_P0022893 Kifap3 protein_coding protein_coding MGP_NODShiLtJ_T0022894.1 MGP_NODShiLtJ_G0016543.1 mouse_genomes_project 1 188598938 188743439 + MGP_NODShiLtJ_P0022894 Kifap3 protein_coding protein_coding MGP_NODShiLtJ_T0000680.1 MGP_NODShiLtJ_G0000614.1 mouse_genomes_project 1 181021863 181024192 + TEC TEC MGP_NODShiLtJ_T0000759.1 MGP_NODShiLtJ_G0000691.1 mouse_genomes_project 1 211493787 211494542 + TEC TEC MGP_NODShiLtJ_T0011956.1 MGP_NODShiLtJ_G0010064.1 mouse_genomes_project 1 71379106 71379610 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005897.1 MGP_NODShiLtJ_G0004938.1 mouse_genomes_project 1 184392682 184395313 - Gm37294 lincRNA lincRNA MGP_NODShiLtJ_T0012064.1 MGP_NODShiLtJ_G0010172.1 mouse_genomes_project 1 125020823 125021010 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012095.1 MGP_NODShiLtJ_G0010203.1 mouse_genomes_project 1 138520418 138520628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005876.1 MGP_NODShiLtJ_G0004922.1 mouse_genomes_project 1 174620698 174625040 + C730036E19Rik lincRNA lincRNA MGP_NODShiLtJ_T0020246.1 MGP_NODShiLtJ_G0016004.1 mouse_genomes_project 1 82348010 82348846 - MGP_NODShiLtJ_P0020246 Tnp1 protein_coding protein_coding MGP_NODShiLtJ_T0005751.1 MGP_NODShiLtJ_G0004817.1 mouse_genomes_project 1 93151889 93152425 + Gm28942 lincRNA lincRNA MGP_NODShiLtJ_T0005693.1 MGP_NODShiLtJ_G0004776.1 mouse_genomes_project 1 70368323 70379338 - Gm4208 lincRNA lincRNA MGP_NODShiLtJ_T0018975.1 MGP_NODShiLtJ_G0015762.1 mouse_genomes_project 1 33391119 33402566 - MGP_NODShiLtJ_P0018975 protein_coding protein_coding MGP_NODShiLtJ_T0018976.1 MGP_NODShiLtJ_G0015762.1 mouse_genomes_project 1 33399334 33402383 - MGP_NODShiLtJ_P0018976 protein_coding protein_coding MGP_NODShiLtJ_T0009468.1 MGP_NODShiLtJ_G0007601.1 mouse_genomes_project 1 207407646 207407713 + Mir6904 miRNA miRNA MGP_NODShiLtJ_T0023255.1 MGP_NODShiLtJ_G0016625.1 mouse_genomes_project 1 196810636 196818117 - Nit1 protein_coding retained_intron MGP_NODShiLtJ_T0023256.1 MGP_NODShiLtJ_G0016625.1 mouse_genomes_project 1 196810636 196818263 - MGP_NODShiLtJ_P0023256 Nit1 protein_coding protein_coding MGP_NODShiLtJ_T0023257.1 MGP_NODShiLtJ_G0016625.1 mouse_genomes_project 1 196813195 196818281 - MGP_NODShiLtJ_P0023257 Nit1 protein_coding protein_coding MGP_NODShiLtJ_T0023258.1 MGP_NODShiLtJ_G0016625.1 mouse_genomes_project 1 196813952 196818275 - Nit1 protein_coding retained_intron MGP_NODShiLtJ_T0023259.1 MGP_NODShiLtJ_G0016625.1 mouse_genomes_project 1 196814863 196818280 - MGP_NODShiLtJ_P0023259 Nit1 protein_coding protein_coding MGP_NODShiLtJ_T0023260.1 MGP_NODShiLtJ_G0016625.1 mouse_genomes_project 1 196816396 196818260 - MGP_NODShiLtJ_P0023260 Nit1 protein_coding protein_coding MGP_NODShiLtJ_T0023261.1 MGP_NODShiLtJ_G0016625.1 mouse_genomes_project 1 196816451 196817100 - Nit1 protein_coding retained_intron MGP_NODShiLtJ_T0023262.1 MGP_NODShiLtJ_G0016625.1 mouse_genomes_project 1 196816766 196818280 - MGP_NODShiLtJ_P0023262 Nit1 protein_coding protein_coding MGP_NODShiLtJ_T0019395.1 MGP_NODShiLtJ_G0015843.1 mouse_genomes_project 1 47017886 47073008 - MGP_NODShiLtJ_P0019395 Tgfbrap1 protein_coding protein_coding MGP_NODShiLtJ_T0019396.1 MGP_NODShiLtJ_G0015843.1 mouse_genomes_project 1 47017906 47067298 - MGP_NODShiLtJ_P0019396 Tgfbrap1 protein_coding protein_coding MGP_NODShiLtJ_T0019397.1 MGP_NODShiLtJ_G0015843.1 mouse_genomes_project 1 47025385 47031615 - Tgfbrap1 protein_coding retained_intron MGP_NODShiLtJ_T0019398.1 MGP_NODShiLtJ_G0015843.1 mouse_genomes_project 1 47030572 47067016 - MGP_NODShiLtJ_P0019398 Tgfbrap1 protein_coding protein_coding MGP_NODShiLtJ_T0019399.1 MGP_NODShiLtJ_G0015843.1 mouse_genomes_project 1 47046024 47072994 - MGP_NODShiLtJ_P0019399 Tgfbrap1 protein_coding protein_coding MGP_NODShiLtJ_T0019400.1 MGP_NODShiLtJ_G0015843.1 mouse_genomes_project 1 47048792 47067032 - Tgfbrap1 protein_coding retained_intron MGP_NODShiLtJ_T0019401.1 MGP_NODShiLtJ_G0015843.1 mouse_genomes_project 1 47049033 47073023 - Tgfbrap1 protein_coding retained_intron MGP_NODShiLtJ_T0019402.1 MGP_NODShiLtJ_G0015843.1 mouse_genomes_project 1 47050165 47072750 - MGP_NODShiLtJ_P0019402 Tgfbrap1 protein_coding protein_coding MGP_NODShiLtJ_T0000367.1 MGP_NODShiLtJ_G0000305.1 mouse_genomes_project 1 9277451 9279375 - TEC TEC MGP_NODShiLtJ_T0000397.1 MGP_NODShiLtJ_G0000334.1 mouse_genomes_project 1 25843106 25848692 - TEC TEC MGP_NODShiLtJ_T0021487.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860265 136083434 + MGP_NODShiLtJ_P0021487 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021488.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860265 136083434 + MGP_NODShiLtJ_P0021488 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021489.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860265 136083502 + MGP_NODShiLtJ_P0021489 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021490.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860265 136083434 + MGP_NODShiLtJ_P0021490 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021491.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860551 135983512 + Clasp1 protein_coding retained_intron MGP_NODShiLtJ_T0021492.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860661 136081195 + MGP_NODShiLtJ_P0021492 Clasp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021493.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860670 136081612 + MGP_NODShiLtJ_P0021493 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021494.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860670 136083496 + MGP_NODShiLtJ_P0021494 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021495.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860670 136081612 + MGP_NODShiLtJ_P0021495 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021496.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860671 136081769 + MGP_NODShiLtJ_P0021496 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021497.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860672 135987832 + Clasp1 protein_coding retained_intron MGP_NODShiLtJ_T0021498.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860688 136081195 + MGP_NODShiLtJ_P0021498 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021499.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135860732 136083242 + MGP_NODShiLtJ_P0021499 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021500.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135893255 136083505 + MGP_NODShiLtJ_P0021500 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021501.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135893419 136087618 + MGP_NODShiLtJ_P0021501 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021502.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135893419 136081142 + MGP_NODShiLtJ_P0021502 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021503.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135940281 135978067 + Clasp1 protein_coding retained_intron MGP_NODShiLtJ_T0021504.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135951545 136081129 + Clasp1 protein_coding processed_transcript MGP_NODShiLtJ_T0021505.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135951600 135984195 + Clasp1 protein_coding processed_transcript MGP_NODShiLtJ_T0021506.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135952361 135981689 + Clasp1 protein_coding processed_transcript MGP_NODShiLtJ_T0021507.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135953546 135985212 + MGP_NODShiLtJ_P0021507 Clasp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021508.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135963805 136081167 + MGP_NODShiLtJ_P0021508 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021509.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135990495 136006400 + Clasp1 protein_coding retained_intron MGP_NODShiLtJ_T0021510.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 135992975 136028999 + MGP_NODShiLtJ_P0021510 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021511.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 136012621 136083462 + MGP_NODShiLtJ_P0021511 Clasp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021512.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 136015308 136018033 + Clasp1 protein_coding retained_intron MGP_NODShiLtJ_T0021513.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 136028298 136029018 + Clasp1 protein_coding retained_intron MGP_NODShiLtJ_T0021514.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 136029064 136061591 + MGP_NODShiLtJ_P0021514 Clasp1 protein_coding protein_coding MGP_NODShiLtJ_T0021515.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 136035128 136037220 + Clasp1 protein_coding retained_intron MGP_NODShiLtJ_T0021516.1 MGP_NODShiLtJ_G0016263.1 mouse_genomes_project 1 136078655 136083434 + Clasp1 protein_coding retained_intron MGP_NODShiLtJ_T0005730.1 MGP_NODShiLtJ_G0004801.1 mouse_genomes_project 1 82982393 83259092 - 6030407O03Rik lincRNA lincRNA MGP_NODShiLtJ_T0005731.1 MGP_NODShiLtJ_G0004801.1 mouse_genomes_project 1 82982393 83129385 - 6030407O03Rik lincRNA lincRNA MGP_NODShiLtJ_T0009445.1 MGP_NODShiLtJ_G0007578.1 mouse_genomes_project 1 157687603 157687690 + Mir181a-1 miRNA miRNA MGP_NODShiLtJ_T0018888.1 MGP_NODShiLtJ_G0015743.1 mouse_genomes_project 1 21161332 21186360 + MGP_NODShiLtJ_P0018888 Gsta3 protein_coding protein_coding MGP_NODShiLtJ_T0018889.1 MGP_NODShiLtJ_G0015743.1 mouse_genomes_project 1 21161350 21185720 + MGP_NODShiLtJ_P0018889 Gsta3 protein_coding protein_coding MGP_NODShiLtJ_T0018890.1 MGP_NODShiLtJ_G0015743.1 mouse_genomes_project 1 21161372 21185545 + MGP_NODShiLtJ_P0018890 Gsta3 protein_coding protein_coding MGP_NODShiLtJ_T0018891.1 MGP_NODShiLtJ_G0015743.1 mouse_genomes_project 1 21174217 21177009 + Gsta3 protein_coding retained_intron MGP_NODShiLtJ_T0021053.1 MGP_NODShiLtJ_G0016163.1 mouse_genomes_project 1 101548814 101561586 + MGP_NODShiLtJ_P0021053 Ackr3 protein_coding protein_coding MGP_NODShiLtJ_T0021054.1 MGP_NODShiLtJ_G0016163.1 mouse_genomes_project 1 101548840 101558668 + MGP_NODShiLtJ_P0021054 Ackr3 protein_coding protein_coding MGP_NODShiLtJ_T0018919.1 MGP_NODShiLtJ_G0015752.1 mouse_genomes_project 1 24205255 24270487 - Smap1 protein_coding processed_transcript MGP_NODShiLtJ_T0018920.1 MGP_NODShiLtJ_G0015752.1 mouse_genomes_project 1 24206739 24283093 - MGP_NODShiLtJ_P0018920 Smap1 protein_coding protein_coding MGP_NODShiLtJ_T0018921.1 MGP_NODShiLtJ_G0015752.1 mouse_genomes_project 1 24207292 24208892 - Smap1 protein_coding processed_transcript MGP_NODShiLtJ_T0018922.1 MGP_NODShiLtJ_G0015752.1 mouse_genomes_project 1 24207543 24282931 - MGP_NODShiLtJ_P0018922 Smap1 protein_coding protein_coding MGP_NODShiLtJ_T0018923.1 MGP_NODShiLtJ_G0015752.1 mouse_genomes_project 1 24209394 24230709 - Smap1 protein_coding processed_transcript MGP_NODShiLtJ_T0018924.1 MGP_NODShiLtJ_G0015752.1 mouse_genomes_project 1 24209647 24270454 - Smap1 protein_coding processed_transcript MGP_NODShiLtJ_T0018925.1 MGP_NODShiLtJ_G0015752.1 mouse_genomes_project 1 24209909 24253264 - Smap1 protein_coding retained_intron MGP_NODShiLtJ_T0101477.1 MGP_NODShiLtJ_G0039647.1 mouse_genomes_project 1 88144956 88145217 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0019848.1 MGP_NODShiLtJ_G0015927.1 mouse_genomes_project 1 66234681 66255476 - MGP_NODShiLtJ_P0019848 Tmem237 protein_coding protein_coding MGP_NODShiLtJ_T0019849.1 MGP_NODShiLtJ_G0015927.1 mouse_genomes_project 1 66234688 66255188 - MGP_NODShiLtJ_P0019849 Tmem237 protein_coding protein_coding MGP_NODShiLtJ_T0019850.1 MGP_NODShiLtJ_G0015927.1 mouse_genomes_project 1 66235091 66255759 - MGP_NODShiLtJ_P0019850 Tmem237 protein_coding protein_coding MGP_NODShiLtJ_T0019851.1 MGP_NODShiLtJ_G0015927.1 mouse_genomes_project 1 66242782 66255489 - MGP_NODShiLtJ_P0019851 Tmem237 protein_coding protein_coding MGP_NODShiLtJ_T0019852.1 MGP_NODShiLtJ_G0015927.1 mouse_genomes_project 1 66243371 66249655 - Tmem237 protein_coding retained_intron MGP_NODShiLtJ_T0019853.1 MGP_NODShiLtJ_G0015927.1 mouse_genomes_project 1 66243676 66255785 - MGP_NODShiLtJ_P0019853 Tmem237 protein_coding protein_coding MGP_NODShiLtJ_T0019854.1 MGP_NODShiLtJ_G0015927.1 mouse_genomes_project 1 66245473 66251297 - Tmem237 protein_coding retained_intron MGP_NODShiLtJ_T0012123.1 MGP_NODShiLtJ_G0010231.1 mouse_genomes_project 1 153420427 153423137 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000753.1 MGP_NODShiLtJ_G0000686.1 mouse_genomes_project 1 208977878 208979485 - TEC TEC MGP_NODShiLtJ_T0000648.1 MGP_NODShiLtJ_G0000582.1 mouse_genomes_project 1 158996193 158998824 + TEC TEC MGP_NODShiLtJ_T0012070.1 MGP_NODShiLtJ_G0010178.1 mouse_genomes_project 1 128466523 128467086 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000535.1 MGP_NODShiLtJ_G0000471.1 mouse_genomes_project 1 97294349 97295524 + TEC TEC MGP_NODShiLtJ_T0020140.1 MGP_NODShiLtJ_G0015981.1 mouse_genomes_project 1 74793312 74881254 - MGP_NODShiLtJ_P0020140 Kansl1l protein_coding protein_coding MGP_NODShiLtJ_T0020141.1 MGP_NODShiLtJ_G0015981.1 mouse_genomes_project 1 74793312 74901698 - MGP_NODShiLtJ_P0020141 Kansl1l protein_coding protein_coding MGP_NODShiLtJ_T0020142.1 MGP_NODShiLtJ_G0015981.1 mouse_genomes_project 1 74807832 74887836 - MGP_NODShiLtJ_P0020142 Kansl1l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0020143.1 MGP_NODShiLtJ_G0015981.1 mouse_genomes_project 1 74811841 74901714 - MGP_NODShiLtJ_P0020143 Kansl1l protein_coding protein_coding MGP_NODShiLtJ_T0020144.1 MGP_NODShiLtJ_G0015981.1 mouse_genomes_project 1 74860202 74892328 - Kansl1l protein_coding processed_transcript MGP_NODShiLtJ_T0020145.1 MGP_NODShiLtJ_G0015981.1 mouse_genomes_project 1 74880785 74901698 - Kansl1l protein_coding retained_intron MGP_NODShiLtJ_T0019458.1 MGP_NODShiLtJ_G0015855.1 mouse_genomes_project 1 48205081 48206895 + Ercc5 protein_coding retained_intron MGP_NODShiLtJ_T0019459.1 MGP_NODShiLtJ_G0015855.1 mouse_genomes_project 1 48205184 48246189 + Ercc5 protein_coding retained_intron MGP_NODShiLtJ_T0019460.1 MGP_NODShiLtJ_G0015855.1 mouse_genomes_project 1 48205184 48246189 + MGP_NODShiLtJ_P0019460 Ercc5 protein_coding protein_coding MGP_NODShiLtJ_T0019461.1 MGP_NODShiLtJ_G0015855.1 mouse_genomes_project 1 48205246 48223845 + Ercc5 protein_coding processed_transcript MGP_NODShiLtJ_T0019462.1 MGP_NODShiLtJ_G0015855.1 mouse_genomes_project 1 48205269 48220254 + Ercc5 protein_coding processed_transcript MGP_NODShiLtJ_T0019463.1 MGP_NODShiLtJ_G0015855.1 mouse_genomes_project 1 48218942 48230300 + Ercc5 protein_coding retained_intron MGP_NODShiLtJ_T0019464.1 MGP_NODShiLtJ_G0015855.1 mouse_genomes_project 1 48220828 48230519 + Ercc5 protein_coding retained_intron MGP_NODShiLtJ_T0098597.1 MGP_NODShiLtJ_G0036991.1 mouse_genomes_project 1 220428132 220428248 + Gm22265 snRNA snRNA MGP_NODShiLtJ_T0023711.1 MGP_NODShiLtJ_G0016746.1 mouse_genomes_project 1 207769982 207774282 + MGP_NODShiLtJ_P0023711 Pycr2 protein_coding protein_coding MGP_NODShiLtJ_T0023712.1 MGP_NODShiLtJ_G0016746.1 mouse_genomes_project 1 207769998 207772822 + Pycr2 protein_coding retained_intron MGP_NODShiLtJ_T0023713.1 MGP_NODShiLtJ_G0016746.1 mouse_genomes_project 1 207770012 207774281 + Pycr2 protein_coding retained_intron MGP_NODShiLtJ_T0023714.1 MGP_NODShiLtJ_G0016746.1 mouse_genomes_project 1 207772117 207773105 + Pycr2 protein_coding retained_intron MGP_NODShiLtJ_T0012024.1 MGP_NODShiLtJ_G0010132.1 mouse_genomes_project 1 103907403 103907815 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098225.1 MGP_NODShiLtJ_G0036637.1 mouse_genomes_project 1 78440197 78443684 - Gm29112 sense_intronic sense_intronic MGP_NODShiLtJ_T0011799.1 MGP_NODShiLtJ_G0009907.1 mouse_genomes_project 1 20703776 20704940 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020572.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84923332 84931248 - Obsl1 protein_coding retained_intron MGP_NODShiLtJ_T0020577.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84929839 84955043 - MGP_NODShiLtJ_P0020577 Obsl1 protein_coding protein_coding MGP_NODShiLtJ_T0020578.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84930865 84931817 - Obsl1 protein_coding retained_intron MGP_NODShiLtJ_T0020579.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84931237 84932093 - Obsl1 protein_coding retained_intron MGP_NODShiLtJ_T0020580.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84934547 84954323 - MGP_NODShiLtJ_P0020580 Obsl1 protein_coding protein_coding MGP_NODShiLtJ_T0020581.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84934862 84937081 - MGP_NODShiLtJ_P0020581 Obsl1 protein_coding protein_coding MGP_NODShiLtJ_T0020582.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84934982 84935825 - Obsl1 protein_coding retained_intron MGP_NODShiLtJ_T0020583.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84935371 84936645 - Obsl1 protein_coding processed_transcript MGP_NODShiLtJ_T0020584.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84936408 84937055 - Obsl1 protein_coding retained_intron MGP_NODShiLtJ_T0020585.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84945029 84955043 - MGP_NODShiLtJ_P0020585 Obsl1 protein_coding protein_coding MGP_NODShiLtJ_T0020586.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84945030 84952362 - Obsl1 protein_coding retained_intron MGP_NODShiLtJ_T0020587.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84950363 84955134 - Obsl1 protein_coding retained_intron MGP_NODShiLtJ_T0020588.1 MGP_NODShiLtJ_G0016056.1 mouse_genomes_project 1 84950363 84955043 - Obsl1 protein_coding retained_intron MGP_NODShiLtJ_T0022240.1 MGP_NODShiLtJ_G0016421.1 mouse_genomes_project 1 158671396 158676266 - MGP_NODShiLtJ_P0022240 2310009B15Rik protein_coding protein_coding MGP_NODShiLtJ_T0022241.1 MGP_NODShiLtJ_G0016421.1 mouse_genomes_project 1 158671397 158673764 - 2310009B15Rik protein_coding retained_intron MGP_NODShiLtJ_T0022242.1 MGP_NODShiLtJ_G0016421.1 mouse_genomes_project 1 158671446 158676261 - MGP_NODShiLtJ_P0022242 2310009B15Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022127.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155249353 155256436 + Tnni1 protein_coding processed_transcript MGP_NODShiLtJ_T0022128.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155254399 155280484 + MGP_NODShiLtJ_P0022128 Tnni1 protein_coding protein_coding MGP_NODShiLtJ_T0022129.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155272639 155285870 + MGP_NODShiLtJ_P0022129 Tnni1 protein_coding protein_coding MGP_NODShiLtJ_T0022130.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155272658 155285515 + Tnni1 protein_coding processed_transcript MGP_NODShiLtJ_T0022131.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155272658 155285870 + MGP_NODShiLtJ_P0022131 Tnni1 protein_coding protein_coding MGP_NODShiLtJ_T0022132.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155272748 155285581 + MGP_NODShiLtJ_P0022132 Tnni1 protein_coding protein_coding MGP_NODShiLtJ_T0022133.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155272756 155284619 + MGP_NODShiLtJ_P0022133 Tnni1 protein_coding protein_coding MGP_NODShiLtJ_T0022134.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155273070 155285870 + MGP_NODShiLtJ_P0022134 Tnni1 protein_coding protein_coding MGP_NODShiLtJ_T0022135.1 MGP_NODShiLtJ_G0016400.1 mouse_genomes_project 1 155279917 155284793 + MGP_NODShiLtJ_P0022135 Tnni1 protein_coding protein_coding MGP_NODShiLtJ_T0011880.1 MGP_NODShiLtJ_G0009988.1 mouse_genomes_project 1 49861405 49864816 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011759.1 MGP_NODShiLtJ_G0009867.1 mouse_genomes_project 1 5696638 5698001 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009452.1 MGP_NODShiLtJ_G0007585.1 mouse_genomes_project 1 182739647 182739756 + Mir488 miRNA miRNA MGP_NODShiLtJ_T0009444.1 MGP_NODShiLtJ_G0007577.1 mouse_genomes_project 1 154908105 154908186 - Mir1231 miRNA miRNA MGP_NODShiLtJ_T0011837.1 MGP_NODShiLtJ_G0009945.1 mouse_genomes_project 1 36501639 36502057 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022839.1 MGP_NODShiLtJ_G0016531.1 mouse_genomes_project 1 187329210 187345529 + MGP_NODShiLtJ_P0022839 Myoc protein_coding protein_coding MGP_NODShiLtJ_T0097870.1 MGP_NODShiLtJ_G0036282.1 mouse_genomes_project 1 173001155 173001264 - n-R5s218 rRNA rRNA MGP_NODShiLtJ_T0005642.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46510451 46620614 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005643.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570074 46618937 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005644.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570080 46591366 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005645.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570081 46618962 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005646.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570081 46573563 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005647.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570081 46620631 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005648.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570081 46620631 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005649.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570082 46592047 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005650.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570082 46618902 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005651.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46570259 46591287 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005652.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46591226 46620648 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0005653.1 MGP_NODShiLtJ_G0004743.1 mouse_genomes_project 1 46618835 46620631 - Pantr1 lincRNA lincRNA MGP_NODShiLtJ_T0020231.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81877238 81922523 + Smarcal1 protein_coding retained_intron MGP_NODShiLtJ_T0020232.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81877238 81894252 + Smarcal1 protein_coding retained_intron MGP_NODShiLtJ_T0020233.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81877238 81891126 + Smarcal1 protein_coding retained_intron MGP_NODShiLtJ_T0020234.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81877238 81928739 + MGP_NODShiLtJ_P0020234 Smarcal1 protein_coding protein_coding MGP_NODShiLtJ_T0020235.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81877238 81879979 + MGP_NODShiLtJ_P0020235 Smarcal1 protein_coding protein_coding MGP_NODShiLtJ_T0020236.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81877238 81890686 + MGP_NODShiLtJ_P0020236 Smarcal1 protein_coding protein_coding MGP_NODShiLtJ_T0020237.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81877602 81928739 + MGP_NODShiLtJ_P0020237 Smarcal1 protein_coding protein_coding MGP_NODShiLtJ_T0020238.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81879625 81922523 + Smarcal1 protein_coding retained_intron MGP_NODShiLtJ_T0020239.1 MGP_NODShiLtJ_G0015999.1 mouse_genomes_project 1 81911360 81923906 + Smarcal1 protein_coding retained_intron MGP_NODShiLtJ_T0012197.1 MGP_NODShiLtJ_G0010305.1 mouse_genomes_project 1 190754314 190755376 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021388.1 MGP_NODShiLtJ_G0016236.1 mouse_genomes_project 1 119200121 119443427 + MGP_NODShiLtJ_P0021388 Cdh20 protein_coding protein_coding MGP_NODShiLtJ_T0020039.1 MGP_NODShiLtJ_G0015959.1 mouse_genomes_project 1 71461215 71476163 - MGP_NODShiLtJ_P0020039 4933402D24Rik protein_coding protein_coding MGP_NODShiLtJ_T0018764.1 MGP_NODShiLtJ_G0015710.1 mouse_genomes_project 1 12423236 12448617 - MGP_NODShiLtJ_P0018764 Tram1 protein_coding protein_coding MGP_NODShiLtJ_T0018765.1 MGP_NODShiLtJ_G0015710.1 mouse_genomes_project 1 12434746 12438399 - Tram1 protein_coding retained_intron MGP_NODShiLtJ_T0018766.1 MGP_NODShiLtJ_G0015710.1 mouse_genomes_project 1 12436720 12448601 - MGP_NODShiLtJ_P0018766 Tram1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021476.1 MGP_NODShiLtJ_G0016260.1 mouse_genomes_project 1 132777760 133839603 + MGP_NODShiLtJ_P0021476 Cntnap5a protein_coding protein_coding MGP_NODShiLtJ_T0021477.1 MGP_NODShiLtJ_G0016260.1 mouse_genomes_project 1 132778141 133833044 + MGP_NODShiLtJ_P0021477 Cntnap5a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0099777.1 MGP_NODShiLtJ_G0038171.1 mouse_genomes_project 1 97044239 97044309 - Snord82 snoRNA snoRNA MGP_NODShiLtJ_T0005796.1 MGP_NODShiLtJ_G0004858.1 mouse_genomes_project 1 115605453 115607579 - Gm28187 lincRNA lincRNA MGP_NODShiLtJ_T0022558.1 MGP_NODShiLtJ_G0016485.1 mouse_genomes_project 1 179589625 179637095 - MGP_NODShiLtJ_P0022558 Lhx4 protein_coding protein_coding MGP_NODShiLtJ_T0022559.1 MGP_NODShiLtJ_G0016485.1 mouse_genomes_project 1 179597961 179648417 - MGP_NODShiLtJ_P0022559 Lhx4 protein_coding protein_coding MGP_NODShiLtJ_T0005847.1 MGP_NODShiLtJ_G0004899.1 mouse_genomes_project 1 153777685 153786250 + lincRNA lincRNA MGP_NODShiLtJ_T0020241.1 MGP_NODShiLtJ_G0016001.1 mouse_genomes_project 1 82016369 82018917 + MGP_NODShiLtJ_P0020241 Rpl37a protein_coding protein_coding MGP_NODShiLtJ_T0012073.1 MGP_NODShiLtJ_G0010181.1 mouse_genomes_project 1 128620265 128620930 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012022.1 MGP_NODShiLtJ_G0010130.1 mouse_genomes_project 1 102908809 102909002 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021815.1 MGP_NODShiLtJ_G0016332.1 mouse_genomes_project 1 150859183 150861955 + Slc41a1 protein_coding processed_transcript MGP_NODShiLtJ_T0021816.1 MGP_NODShiLtJ_G0016332.1 mouse_genomes_project 1 150859667 150880851 + MGP_NODShiLtJ_P0021816 Slc41a1 protein_coding protein_coding MGP_NODShiLtJ_T0021817.1 MGP_NODShiLtJ_G0016332.1 mouse_genomes_project 1 150874825 150878615 + Slc41a1 protein_coding retained_intron MGP_NODShiLtJ_T0022125.1 MGP_NODShiLtJ_G0016399.1 mouse_genomes_project 1 155235989 155239015 + MGP_NODShiLtJ_P0022125 Phlda3 protein_coding protein_coding MGP_NODShiLtJ_T0022126.1 MGP_NODShiLtJ_G0016399.1 mouse_genomes_project 1 155237004 155238801 + Phlda3 protein_coding processed_transcript MGP_NODShiLtJ_T0005657.1 MGP_NODShiLtJ_G0004747.1 mouse_genomes_project 1 47765238 47765737 - Gm29156 lincRNA lincRNA MGP_NODShiLtJ_T0020669.1 MGP_NODShiLtJ_G0016075.1 mouse_genomes_project 1 90094331 90112142 - MGP_NODShiLtJ_P0020669 Fam124b protein_coding protein_coding MGP_NODShiLtJ_T0020670.1 MGP_NODShiLtJ_G0016075.1 mouse_genomes_project 1 90095948 90116663 - Fam124b protein_coding processed_transcript MGP_NODShiLtJ_T0012175.1 MGP_NODShiLtJ_G0010283.1 mouse_genomes_project 1 179773233 179773539 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101001.1 MGP_NODShiLtJ_G0039394.1 mouse_genomes_project 1 37503264 37507227 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101002.1 MGP_NODShiLtJ_G0039394.1 mouse_genomes_project 1 37507111 37508908 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0005624.1 MGP_NODShiLtJ_G0004729.1 mouse_genomes_project 1 39272826 39273649 + 4930535G08Rik lincRNA lincRNA MGP_NODShiLtJ_T0000594.1 MGP_NODShiLtJ_G0000530.1 mouse_genomes_project 1 145797117 145798511 + TEC TEC MGP_NODShiLtJ_T0009389.1 MGP_NODShiLtJ_G0007522.1 mouse_genomes_project 1 39415366 39415428 - Mir6897 miRNA miRNA MGP_NODShiLtJ_T0022799.1 MGP_NODShiLtJ_G0016524.1 mouse_genomes_project 1 186393176 186402524 - MGP_NODShiLtJ_P0022799 Fasl protein_coding protein_coding MGP_NODShiLtJ_T0022800.1 MGP_NODShiLtJ_G0016524.1 mouse_genomes_project 1 186393909 186402387 - MGP_NODShiLtJ_P0022800 Fasl protein_coding protein_coding MGP_NODShiLtJ_T0002710.1 MGP_NODShiLtJ_G0002578.1 mouse_genomes_project 1 15293069 15315471 + Gm28095 antisense antisense MGP_NODShiLtJ_T0012060.1 MGP_NODShiLtJ_G0010168.1 mouse_genomes_project 1 123323237 123325706 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023094.1 MGP_NODShiLtJ_G0016589.1 mouse_genomes_project 1 194883093 194925153 + MGP_NODShiLtJ_P0023094 Rgs5 protein_coding protein_coding MGP_NODShiLtJ_T0023095.1 MGP_NODShiLtJ_G0016589.1 mouse_genomes_project 1 194883114 194912329 + MGP_NODShiLtJ_P0023095 Rgs5 protein_coding protein_coding MGP_NODShiLtJ_T0011886.1 MGP_NODShiLtJ_G0009994.1 mouse_genomes_project 1 50437876 50438140 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012128.1 MGP_NODShiLtJ_G0010236.1 mouse_genomes_project 1 156369658 156370134 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021389.1 MGP_NODShiLtJ_G0016237.1 mouse_genomes_project 1 119728261 119825171 - MGP_NODShiLtJ_P0021389 Rnf152 protein_coding protein_coding MGP_NODShiLtJ_T0021390.1 MGP_NODShiLtJ_G0016237.1 mouse_genomes_project 1 119728264 119825211 - MGP_NODShiLtJ_P0021390 Rnf152 protein_coding protein_coding MGP_NODShiLtJ_T0000621.1 MGP_NODShiLtJ_G0000556.1 mouse_genomes_project 1 153407527 153410282 - TEC TEC MGP_NODShiLtJ_T0000433.1 MGP_NODShiLtJ_G0000369.1 mouse_genomes_project 1 37960079 37963110 + TEC TEC MGP_NODShiLtJ_T0022506.1 MGP_NODShiLtJ_G0016475.1 mouse_genomes_project 1 177643401 177646074 + MGP_NODShiLtJ_P0022506 Teddm1a protein_coding protein_coding MGP_NODShiLtJ_T0021649.1 MGP_NODShiLtJ_G0016294.1 mouse_genomes_project 1 146370895 146390370 + Ccnt2 protein_coding retained_intron MGP_NODShiLtJ_T0021650.1 MGP_NODShiLtJ_G0016294.1 mouse_genomes_project 1 146370895 146392581 + Ccnt2 protein_coding retained_intron MGP_NODShiLtJ_T0021651.1 MGP_NODShiLtJ_G0016294.1 mouse_genomes_project 1 146370895 146392581 + Ccnt2 protein_coding retained_intron MGP_NODShiLtJ_T0021652.1 MGP_NODShiLtJ_G0016294.1 mouse_genomes_project 1 146370895 146395189 + Ccnt2 protein_coding retained_intron MGP_NODShiLtJ_T0021653.1 MGP_NODShiLtJ_G0016294.1 mouse_genomes_project 1 146370895 146405198 + MGP_NODShiLtJ_P0021653 Ccnt2 protein_coding protein_coding MGP_NODShiLtJ_T0021654.1 MGP_NODShiLtJ_G0016294.1 mouse_genomes_project 1 146370895 146402960 + MGP_NODShiLtJ_P0021654 Ccnt2 protein_coding protein_coding MGP_NODShiLtJ_T0021655.1 MGP_NODShiLtJ_G0016294.1 mouse_genomes_project 1 146393359 146405198 + Ccnt2 protein_coding processed_transcript MGP_NODShiLtJ_T0000717.1 MGP_NODShiLtJ_G0000651.1 mouse_genomes_project 1 191488750 191489656 - TEC TEC MGP_NODShiLtJ_T0021796.1 MGP_NODShiLtJ_G0016326.1 mouse_genomes_project 1 150540287 150552257 + MGP_NODShiLtJ_P0021796 Fam72a protein_coding protein_coding MGP_NODShiLtJ_T0023263.1 MGP_NODShiLtJ_G0016626.1 mouse_genomes_project 1 196818346 196832951 + MGP_NODShiLtJ_P0023263 Pfdn2 protein_coding protein_coding MGP_NODShiLtJ_T0023264.1 MGP_NODShiLtJ_G0016626.1 mouse_genomes_project 1 196830080 196831661 + Pfdn2 protein_coding processed_transcript MGP_NODShiLtJ_T0097863.1 MGP_NODShiLtJ_G0036275.1 mouse_genomes_project 1 100868681 100868796 + Gm25180 rRNA rRNA MGP_NODShiLtJ_T0023303.1 MGP_NODShiLtJ_G0016638.1 mouse_genomes_project 1 197220784 197243347 + MGP_NODShiLtJ_P0023303 Cd48 protein_coding protein_coding MGP_NODShiLtJ_T0023304.1 MGP_NODShiLtJ_G0016638.1 mouse_genomes_project 1 197220785 197243345 + MGP_NODShiLtJ_P0023304 Cd48 protein_coding protein_coding MGP_NODShiLtJ_T0012049.1 MGP_NODShiLtJ_G0010157.1 mouse_genomes_project 1 119784956 119785282 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000442.1 MGP_NODShiLtJ_G0000378.1 mouse_genomes_project 1 41129738 41131955 - TEC TEC MGP_NODShiLtJ_T0005734.1 MGP_NODShiLtJ_G0004804.1 mouse_genomes_project 1 85955669 86069052 + Gm29069 lincRNA lincRNA MGP_NODShiLtJ_T0022139.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155312490 155328394 + MGP_NODShiLtJ_P0022139 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022140.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155312522 155328394 + MGP_NODShiLtJ_P0022140 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022141.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155312526 155315848 + Tnnt2 protein_coding retained_intron MGP_NODShiLtJ_T0022142.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155312526 155320855 + Tnnt2 protein_coding retained_intron MGP_NODShiLtJ_T0022143.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155312538 155324152 + MGP_NODShiLtJ_P0022143 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022144.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155312546 155328394 + MGP_NODShiLtJ_P0022144 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022145.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155312549 155328394 + MGP_NODShiLtJ_P0022145 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022146.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155316827 155325562 + MGP_NODShiLtJ_P0022146 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022147.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155316985 155328394 + MGP_NODShiLtJ_P0022147 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022148.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155317003 155328394 + MGP_NODShiLtJ_P0022148 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022149.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155317003 155328394 + MGP_NODShiLtJ_P0022149 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022150.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155317003 155328394 + MGP_NODShiLtJ_P0022150 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022151.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155317003 155328394 + MGP_NODShiLtJ_P0022151 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022152.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155317003 155328394 + MGP_NODShiLtJ_P0022152 Tnnt2 protein_coding protein_coding MGP_NODShiLtJ_T0022153.1 MGP_NODShiLtJ_G0016402.1 mouse_genomes_project 1 155325552 155325844 + Tnnt2 protein_coding retained_intron MGP_NODShiLtJ_T0024010.1 MGP_NODShiLtJ_G0016807.1 mouse_genomes_project 1 218668108 218700029 + MGP_NODShiLtJ_P0024010 Nsl1 protein_coding protein_coding MGP_NODShiLtJ_T0024011.1 MGP_NODShiLtJ_G0016807.1 mouse_genomes_project 1 218668120 218701755 + MGP_NODShiLtJ_P0024011 Nsl1 protein_coding protein_coding MGP_NODShiLtJ_T0024012.1 MGP_NODShiLtJ_G0016807.1 mouse_genomes_project 1 218668127 218711330 + MGP_NODShiLtJ_P0024012 Nsl1 protein_coding protein_coding MGP_NODShiLtJ_T0024023.1 MGP_NODShiLtJ_G0016812.1 mouse_genomes_project 1 218968320 218994092 + MGP_NODShiLtJ_P0024023 Tmem206 protein_coding protein_coding MGP_NODShiLtJ_T0009450.1 MGP_NODShiLtJ_G0007583.1 mouse_genomes_project 1 177652944 177653055 + Mir8114 miRNA miRNA MGP_NODShiLtJ_T0005875.1 MGP_NODShiLtJ_G0004921.1 mouse_genomes_project 1 174448234 174451776 + Gm29188 lincRNA lincRNA MGP_NODShiLtJ_T0099744.1 MGP_NODShiLtJ_G0038138.1 mouse_genomes_project 1 23530832 23530953 + Gm24176 snoRNA snoRNA MGP_NODShiLtJ_T0002757.1 MGP_NODShiLtJ_G0002615.1 mouse_genomes_project 1 61346300 61400205 + 4930444A19Rik antisense antisense MGP_NODShiLtJ_T0002758.1 MGP_NODShiLtJ_G0002615.1 mouse_genomes_project 1 61355127 61434943 + 4930444A19Rik antisense antisense MGP_NODShiLtJ_T0000658.1 MGP_NODShiLtJ_G0000592.1 mouse_genomes_project 1 172611023 172612400 - TEC TEC MGP_NODShiLtJ_T0011137.1 MGP_NODShiLtJ_G0009270.1 mouse_genomes_project 1 78814232 78814507 - Gm22665 misc_RNA misc_RNA MGP_NODShiLtJ_T0019288.1 MGP_NODShiLtJ_G0015818.1 mouse_genomes_project 1 42361231 42399378 - MGP_NODShiLtJ_P0019288 Chst10 protein_coding protein_coding MGP_NODShiLtJ_T0019289.1 MGP_NODShiLtJ_G0015818.1 mouse_genomes_project 1 42361231 42399299 - MGP_NODShiLtJ_P0019289 Chst10 protein_coding protein_coding MGP_NODShiLtJ_T0019290.1 MGP_NODShiLtJ_G0015818.1 mouse_genomes_project 1 42361239 42370034 - MGP_NODShiLtJ_P0019290 Chst10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019291.1 MGP_NODShiLtJ_G0015818.1 mouse_genomes_project 1 42361241 42399450 - MGP_NODShiLtJ_P0019291 Chst10 protein_coding protein_coding MGP_NODShiLtJ_T0019292.1 MGP_NODShiLtJ_G0015818.1 mouse_genomes_project 1 42368454 42399442 - MGP_NODShiLtJ_P0019292 Chst10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019293.1 MGP_NODShiLtJ_G0015818.1 mouse_genomes_project 1 42372233 42399423 - MGP_NODShiLtJ_P0019293 Chst10 protein_coding protein_coding MGP_NODShiLtJ_T0019294.1 MGP_NODShiLtJ_G0015818.1 mouse_genomes_project 1 42391339 42399275 - Chst10 protein_coding retained_intron MGP_NODShiLtJ_T0019295.1 MGP_NODShiLtJ_G0015818.1 mouse_genomes_project 1 42391340 42399299 - Chst10 protein_coding retained_intron MGP_NODShiLtJ_T0022679.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182580970 182922301 + MGP_NODShiLtJ_P0022679 Astn1 protein_coding protein_coding MGP_NODShiLtJ_T0022680.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182581001 182922303 + MGP_NODShiLtJ_P0022680 Astn1 protein_coding protein_coding MGP_NODShiLtJ_T0022681.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182581036 182843558 + MGP_NODShiLtJ_P0022681 Astn1 protein_coding protein_coding MGP_NODShiLtJ_T0022682.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182585464 182843026 + MGP_NODShiLtJ_P0022682 Astn1 protein_coding protein_coding MGP_NODShiLtJ_T0022683.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182585477 182910080 + MGP_NODShiLtJ_P0022683 Astn1 protein_coding protein_coding MGP_NODShiLtJ_T0022684.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182743899 182756608 + Astn1 protein_coding processed_transcript MGP_NODShiLtJ_T0022685.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182791130 182830087 + MGP_NODShiLtJ_P0022685 Astn1 protein_coding protein_coding MGP_NODShiLtJ_T0022686.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182829835 182842196 + Astn1 protein_coding retained_intron MGP_NODShiLtJ_T0022687.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182886736 182898149 + MGP_NODShiLtJ_P0022687 Astn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022688.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182886884 182914814 + MGP_NODShiLtJ_P0022688 Astn1 protein_coding protein_coding MGP_NODShiLtJ_T0022689.1 MGP_NODShiLtJ_G0016505.1 mouse_genomes_project 1 182909379 182919054 + Astn1 protein_coding processed_transcript MGP_NODShiLtJ_T0009414.1 MGP_NODShiLtJ_G0007547.1 mouse_genomes_project 1 84641269 84641385 - Gm27943 miRNA miRNA MGP_NODShiLtJ_T0005778.1 MGP_NODShiLtJ_G0004842.1 mouse_genomes_project 1 102917115 102918866 + Gm28382 lincRNA lincRNA MGP_NODShiLtJ_T0000352.1 MGP_NODShiLtJ_G0000290.1 mouse_genomes_project 1 2190922 2192083 - TEC TEC MGP_NODShiLtJ_T0009459.1 MGP_NODShiLtJ_G0007592.1 mouse_genomes_project 1 192357339 192357440 + Mir6347 miRNA miRNA MGP_NODShiLtJ_T0000719.1 MGP_NODShiLtJ_G0000653.1 mouse_genomes_project 1 193507957 193510233 - TEC TEC MGP_NODShiLtJ_T0020520.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84739627 84749498 - MGP_NODShiLtJ_P0020520 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020521.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84739627 84749520 - MGP_NODShiLtJ_P0020521 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020522.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84739671 84748854 - MGP_NODShiLtJ_P0020522 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020523.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84740296 84748806 - MGP_NODShiLtJ_P0020523 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020524.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84740296 84749010 - MGP_NODShiLtJ_P0020524 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020525.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84740914 84745615 - Dnpep protein_coding retained_intron MGP_NODShiLtJ_T0020526.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84744323 84749270 - Dnpep protein_coding retained_intron MGP_NODShiLtJ_T0020527.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84746219 84748664 - MGP_NODShiLtJ_P0020527 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020528.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84746222 84748882 - MGP_NODShiLtJ_P0020528 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020529.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84747057 84749174 - MGP_NODShiLtJ_P0020529 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020530.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84747839 84749308 - MGP_NODShiLtJ_P0020530 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020531.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84748207 84749233 - Dnpep protein_coding retained_intron MGP_NODShiLtJ_T0020532.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84748230 84749925 - MGP_NODShiLtJ_P0020532 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0020533.1 MGP_NODShiLtJ_G0016050.1 mouse_genomes_project 1 84748414 84749243 - MGP_NODShiLtJ_P0020533 Dnpep protein_coding protein_coding MGP_NODShiLtJ_T0011793.1 MGP_NODShiLtJ_G0009901.1 mouse_genomes_project 1 18344445 18345354 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022098.1 MGP_NODShiLtJ_G0016395.1 mouse_genomes_project 1 154823553 154827754 - MGP_NODShiLtJ_P0022098 Shisa4 protein_coding protein_coding MGP_NODShiLtJ_T0022099.1 MGP_NODShiLtJ_G0016395.1 mouse_genomes_project 1 154823556 154825950 - Shisa4 protein_coding retained_intron MGP_NODShiLtJ_T0022100.1 MGP_NODShiLtJ_G0016395.1 mouse_genomes_project 1 154826404 154827594 - Shisa4 protein_coding retained_intron MGP_NODShiLtJ_T0005725.1 MGP_NODShiLtJ_G0004798.1 mouse_genomes_project 1 82751181 82782117 + D530049I02Rik lincRNA lincRNA MGP_NODShiLtJ_T0009393.1 MGP_NODShiLtJ_G0007526.1 mouse_genomes_project 1 42708538 42708635 - Mir6349 miRNA miRNA MGP_NODShiLtJ_T0023521.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202083781 202118348 + MGP_NODShiLtJ_P0023521 Exo1 protein_coding protein_coding MGP_NODShiLtJ_T0023522.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202083994 202090731 + MGP_NODShiLtJ_P0023522 Exo1 protein_coding protein_coding MGP_NODShiLtJ_T0023523.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202083996 202093443 + MGP_NODShiLtJ_P0023523 Exo1 protein_coding protein_coding MGP_NODShiLtJ_T0023524.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202084013 202093465 + MGP_NODShiLtJ_P0023524 Exo1 protein_coding protein_coding MGP_NODShiLtJ_T0023525.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202084379 202093461 + MGP_NODShiLtJ_P0023525 Exo1 protein_coding protein_coding MGP_NODShiLtJ_T0023526.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202094262 202102290 + MGP_NODShiLtJ_P0023526 Exo1 protein_coding protein_coding MGP_NODShiLtJ_T0023527.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202102740 202111443 + MGP_NODShiLtJ_P0023527 Exo1 protein_coding protein_coding MGP_NODShiLtJ_T0023528.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202105595 202111260 + Exo1 protein_coding retained_intron MGP_NODShiLtJ_T0023529.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202105733 202108922 + MGP_NODShiLtJ_P0023529 Exo1 protein_coding protein_coding MGP_NODShiLtJ_T0023530.1 MGP_NODShiLtJ_G0016711.1 mouse_genomes_project 1 202110293 202111455 + Exo1 protein_coding processed_transcript MGP_NODShiLtJ_T0002700.1 MGP_NODShiLtJ_G0002573.1 mouse_genomes_project 1 3873261 3886365 - antisense antisense MGP_NODShiLtJ_T0002701.1 MGP_NODShiLtJ_G0002573.1 mouse_genomes_project 1 3884364 3885662 - antisense antisense MGP_NODShiLtJ_T0002702.1 MGP_NODShiLtJ_G0002573.1 mouse_genomes_project 1 3885683 3886364 - antisense antisense MGP_NODShiLtJ_T0011748.1 MGP_NODShiLtJ_G0009856.1 mouse_genomes_project 1 4704766 4704796 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022514.1 MGP_NODShiLtJ_G0016478.1 mouse_genomes_project 1 178201955 178546762 - MGP_NODShiLtJ_P0022514 Cacna1e protein_coding protein_coding MGP_NODShiLtJ_T0022515.1 MGP_NODShiLtJ_G0016478.1 mouse_genomes_project 1 178203743 178546326 - MGP_NODShiLtJ_P0022515 Cacna1e protein_coding protein_coding MGP_NODShiLtJ_T0022516.1 MGP_NODShiLtJ_G0016478.1 mouse_genomes_project 1 178209614 178546325 - MGP_NODShiLtJ_P0022516 Cacna1e protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022517.1 MGP_NODShiLtJ_G0016478.1 mouse_genomes_project 1 178278937 178286957 - Cacna1e protein_coding retained_intron MGP_NODShiLtJ_T0022518.1 MGP_NODShiLtJ_G0016478.1 mouse_genomes_project 1 178291335 178639248 - Cacna1e protein_coding retained_intron MGP_NODShiLtJ_T0022519.1 MGP_NODShiLtJ_G0016478.1 mouse_genomes_project 1 178519509 178723618 - Cacna1e protein_coding retained_intron MGP_NODShiLtJ_T0022520.1 MGP_NODShiLtJ_G0016478.1 mouse_genomes_project 1 178721282 178723141 - Cacna1e protein_coding retained_intron MGP_NODShiLtJ_T0020790.1 MGP_NODShiLtJ_G0016101.1 mouse_genomes_project 1 95840916 95850742 - MGP_NODShiLtJ_P0020790 protein_coding protein_coding MGP_NODShiLtJ_T0022284.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164936229 164965140 + Glrx2 protein_coding retained_intron MGP_NODShiLtJ_T0022285.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164957392 164965142 + MGP_NODShiLtJ_P0022285 Glrx2 protein_coding protein_coding MGP_NODShiLtJ_T0022286.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164957922 164961117 + Glrx2 protein_coding processed_transcript MGP_NODShiLtJ_T0022287.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164957922 164967764 + MGP_NODShiLtJ_P0022287 Glrx2 protein_coding protein_coding MGP_NODShiLtJ_T0022288.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164957931 164961483 + Glrx2 protein_coding retained_intron MGP_NODShiLtJ_T0022289.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164957975 164961220 + Glrx2 protein_coding processed_transcript MGP_NODShiLtJ_T0022290.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164957980 164965142 + MGP_NODShiLtJ_P0022290 Glrx2 protein_coding protein_coding MGP_NODShiLtJ_T0022291.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164957983 164963978 + MGP_NODShiLtJ_P0022291 Glrx2 protein_coding protein_coding MGP_NODShiLtJ_T0022292.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164958011 164965675 + MGP_NODShiLtJ_P0022292 Glrx2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022293.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164958740 164969694 + MGP_NODShiLtJ_P0022293 Glrx2 protein_coding protein_coding MGP_NODShiLtJ_T0022294.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164961792 164964043 + Glrx2 protein_coding retained_intron MGP_NODShiLtJ_T0022295.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164963363 164965064 + Glrx2 protein_coding retained_intron MGP_NODShiLtJ_T0022296.1 MGP_NODShiLtJ_G0016434.1 mouse_genomes_project 1 164964348 164965141 + Glrx2 protein_coding processed_transcript MGP_NODShiLtJ_T0011933.1 MGP_NODShiLtJ_G0010041.1 mouse_genomes_project 1 66292014 66293397 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099759.1 MGP_NODShiLtJ_G0038153.1 mouse_genomes_project 1 65130074 65130182 - Gm24548 snoRNA snoRNA MGP_NODShiLtJ_T0011885.1 MGP_NODShiLtJ_G0009993.1 mouse_genomes_project 1 50325306 50326482 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005853.1 MGP_NODShiLtJ_G0004905.1 mouse_genomes_project 1 156109591 156112131 - Gm33994 lincRNA lincRNA MGP_NODShiLtJ_T0012014.1 MGP_NODShiLtJ_G0010122.1 mouse_genomes_project 1 98391063 98391186 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021555.1 MGP_NODShiLtJ_G0016273.1 mouse_genomes_project 1 137612186 137688708 + MGP_NODShiLtJ_P0021555 Sctr protein_coding protein_coding MGP_NODShiLtJ_T0021556.1 MGP_NODShiLtJ_G0016273.1 mouse_genomes_project 1 137612326 137688706 + MGP_NODShiLtJ_P0021556 Sctr protein_coding protein_coding MGP_NODShiLtJ_T0021557.1 MGP_NODShiLtJ_G0016273.1 mouse_genomes_project 1 137612549 137688713 + MGP_NODShiLtJ_P0021557 Sctr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0002907.1 MGP_NODShiLtJ_G0002727.1 mouse_genomes_project 1 197452888 197463060 - Gm37065 antisense antisense MGP_NODShiLtJ_T0098573.1 MGP_NODShiLtJ_G0036967.1 mouse_genomes_project 1 174766361 174766452 - Gm24402 snRNA snRNA MGP_NODShiLtJ_T0005753.1 MGP_NODShiLtJ_G0004819.1 mouse_genomes_project 1 94092789 94366318 - 4933436I20Rik lincRNA lincRNA MGP_NODShiLtJ_T0005754.1 MGP_NODShiLtJ_G0004819.1 mouse_genomes_project 1 94295630 94366318 - 4933436I20Rik lincRNA lincRNA MGP_NODShiLtJ_T0011876.1 MGP_NODShiLtJ_G0009984.1 mouse_genomes_project 1 48994872 48995341 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022115.1 MGP_NODShiLtJ_G0016397.1 mouse_genomes_project 1 154889347 155046015 - MGP_NODShiLtJ_P0022115 Nav1 protein_coding protein_coding MGP_NODShiLtJ_T0022116.1 MGP_NODShiLtJ_G0016397.1 mouse_genomes_project 1 154889347 155045665 - MGP_NODShiLtJ_P0022116 Nav1 protein_coding protein_coding MGP_NODShiLtJ_T0022117.1 MGP_NODShiLtJ_G0016397.1 mouse_genomes_project 1 154893482 155069196 - MGP_NODShiLtJ_P0022117 Nav1 protein_coding protein_coding MGP_NODShiLtJ_T0022118.1 MGP_NODShiLtJ_G0016397.1 mouse_genomes_project 1 154905873 154907406 - Nav1 protein_coding retained_intron MGP_NODShiLtJ_T0022119.1 MGP_NODShiLtJ_G0016397.1 mouse_genomes_project 1 154908818 154921976 - MGP_NODShiLtJ_P0022119 Nav1 protein_coding protein_coding MGP_NODShiLtJ_T0022120.1 MGP_NODShiLtJ_G0016397.1 mouse_genomes_project 1 154911275 154914738 - Nav1 protein_coding retained_intron MGP_NODShiLtJ_T0022121.1 MGP_NODShiLtJ_G0016397.1 mouse_genomes_project 1 154911275 154967275 - Nav1 protein_coding retained_intron MGP_NODShiLtJ_T0022122.1 MGP_NODShiLtJ_G0016397.1 mouse_genomes_project 1 154912157 154967342 - Nav1 protein_coding processed_transcript MGP_NODShiLtJ_T0000346.1 MGP_NODShiLtJ_G0000284.1 mouse_genomes_project 1 624229 626538 - TEC TEC MGP_NODShiLtJ_T0000407.1 MGP_NODShiLtJ_G0000344.1 mouse_genomes_project 1 26352554 26369215 - TEC TEC MGP_NODShiLtJ_T0005761.1 MGP_NODShiLtJ_G0004826.1 mouse_genomes_project 1 99697005 99702892 + Gm28888 lincRNA lincRNA MGP_NODShiLtJ_T0011795.1 MGP_NODShiLtJ_G0009903.1 mouse_genomes_project 1 18762446 18762725 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0020700.1 MGP_NODShiLtJ_G0016083.1 mouse_genomes_project 1 92900250 92965003 + Col4a3 protein_coding retained_intron MGP_NODShiLtJ_T0020701.1 MGP_NODShiLtJ_G0016083.1 mouse_genomes_project 1 92900305 93051932 + MGP_NODShiLtJ_P0020701 Col4a3 protein_coding protein_coding MGP_NODShiLtJ_T0020702.1 MGP_NODShiLtJ_G0016083.1 mouse_genomes_project 1 93045433 93049086 + MGP_NODShiLtJ_P0020702 Col4a3 protein_coding protein_coding MGP_NODShiLtJ_T0020703.1 MGP_NODShiLtJ_G0016083.1 mouse_genomes_project 1 93045433 93049005 + MGP_NODShiLtJ_P0020703 Col4a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023981.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218523573 218546411 + MGP_NODShiLtJ_P0023981 Angel2 protein_coding protein_coding MGP_NODShiLtJ_T0023982.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218526952 218537845 + Angel2 protein_coding retained_intron MGP_NODShiLtJ_T0023983.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218526952 218546411 + MGP_NODShiLtJ_P0023983 Angel2 protein_coding protein_coding MGP_NODShiLtJ_T0023984.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218526952 218546411 + MGP_NODShiLtJ_P0023984 Angel2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023985.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218526952 218546411 + MGP_NODShiLtJ_P0023985 Angel2 protein_coding protein_coding MGP_NODShiLtJ_T0023986.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218528364 218537415 + Angel2 protein_coding retained_intron MGP_NODShiLtJ_T0023987.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218532281 218536887 + MGP_NODShiLtJ_P0023987 Angel2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023988.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218536661 218538679 + Angel2 protein_coding retained_intron MGP_NODShiLtJ_T0023989.1 MGP_NODShiLtJ_G0016802.1 mouse_genomes_project 1 218536853 218546411 + Angel2 protein_coding processed_transcript MGP_NODShiLtJ_T0000456.1 MGP_NODShiLtJ_G0000392.1 mouse_genomes_project 1 52315492 52317435 - TEC TEC MGP_NODShiLtJ_T0005939.1 MGP_NODShiLtJ_G0004973.1 mouse_genomes_project 1 204021274 204022676 - 2310043L19Rik lincRNA lincRNA MGP_NODShiLtJ_T0000481.1 MGP_NODShiLtJ_G0000417.1 mouse_genomes_project 1 69110519 69113509 + TEC TEC MGP_NODShiLtJ_T0021005.1 MGP_NODShiLtJ_G0016145.1 mouse_genomes_project 1 99042602 99344403 + MGP_NODShiLtJ_P0021005 Ugt1a8 protein_coding protein_coding MGP_NODShiLtJ_T0002791.1 MGP_NODShiLtJ_G0002637.1 mouse_genomes_project 1 84801442 84808189 - Gm15179 antisense antisense MGP_NODShiLtJ_T0002792.1 MGP_NODShiLtJ_G0002637.1 mouse_genomes_project 1 84801502 84803676 - Gm15179 antisense antisense MGP_NODShiLtJ_T0011754.1 MGP_NODShiLtJ_G0009862.1 mouse_genomes_project 1 5161297 5162309 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024146.1 MGP_NODShiLtJ_G0016833.1 mouse_genomes_project 1 221097541 221121533 - MGP_NODShiLtJ_P0024146 Camk1g protein_coding protein_coding MGP_NODShiLtJ_T0024147.1 MGP_NODShiLtJ_G0016833.1 mouse_genomes_project 1 221097541 221121606 - MGP_NODShiLtJ_P0024147 Camk1g protein_coding protein_coding MGP_NODShiLtJ_T0024148.1 MGP_NODShiLtJ_G0016833.1 mouse_genomes_project 1 221100075 221111085 - MGP_NODShiLtJ_P0024148 Camk1g protein_coding protein_coding MGP_NODShiLtJ_T0024149.1 MGP_NODShiLtJ_G0016833.1 mouse_genomes_project 1 221106106 221121553 - Camk1g protein_coding retained_intron MGP_NODShiLtJ_T0018646.1 MGP_NODShiLtJ_G0015693.1 mouse_genomes_project 1 7967244 7995707 + MGP_NODShiLtJ_P0018646 3110035E14Rik protein_coding protein_coding MGP_NODShiLtJ_T0012113.1 MGP_NODShiLtJ_G0010221.1 mouse_genomes_project 1 147159606 147159914 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011938.1 MGP_NODShiLtJ_G0010046.1 mouse_genomes_project 1 67830265 67830493 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000667.1 MGP_NODShiLtJ_G0000601.1 mouse_genomes_project 1 177132139 177132959 + TEC TEC MGP_NODShiLtJ_T0012159.1 MGP_NODShiLtJ_G0010267.1 mouse_genomes_project 1 173505934 173506536 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022946.1 MGP_NODShiLtJ_G0016556.1 mouse_genomes_project 1 189750036 189781233 + MGP_NODShiLtJ_P0022946 Dpt protein_coding protein_coding MGP_NODShiLtJ_T0000723.1 MGP_NODShiLtJ_G0000657.1 mouse_genomes_project 1 197953810 197956544 - TEC TEC MGP_NODShiLtJ_T0009421.1 MGP_NODShiLtJ_G0007554.1 mouse_genomes_project 1 96378920 96379047 + Mir8096 miRNA miRNA MGP_NODShiLtJ_T0005599.1 MGP_NODShiLtJ_G0004707.1 mouse_genomes_project 1 20553342 20559077 + Gm28653 lincRNA lincRNA MGP_NODShiLtJ_T0009443.1 MGP_NODShiLtJ_G0007576.1 mouse_genomes_project 1 154192616 154192700 + Gm22232 miRNA miRNA MGP_NODShiLtJ_T0000375.1 MGP_NODShiLtJ_G0000313.1 mouse_genomes_project 1 12135912 12137779 - TEC TEC MGP_NODShiLtJ_T0000496.1 MGP_NODShiLtJ_G0000432.1 mouse_genomes_project 1 76476268 76478975 - TEC TEC MGP_NODShiLtJ_T0002858.1 MGP_NODShiLtJ_G0002690.1 mouse_genomes_project 1 168369594 168497555 - antisense antisense MGP_NODShiLtJ_T0002859.1 MGP_NODShiLtJ_G0002690.1 mouse_genomes_project 1 168380198 168497664 - antisense antisense MGP_NODShiLtJ_T0000711.1 MGP_NODShiLtJ_G0000645.1 mouse_genomes_project 1 189834152 189837675 - TEC TEC MGP_NODShiLtJ_T0011809.1 MGP_NODShiLtJ_G0009917.1 mouse_genomes_project 1 23794290 23795278 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019434.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48141916 48157336 - MGP_NODShiLtJ_P0019434 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019435.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48141919 48157383 - MGP_NODShiLtJ_P0019435 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019436.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48142113 48157307 - MGP_NODShiLtJ_P0019436 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019437.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48142113 48157288 - MGP_NODShiLtJ_P0019437 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019438.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48142163 48157368 - MGP_NODShiLtJ_P0019438 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019439.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48142164 48157386 - MGP_NODShiLtJ_P0019439 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019440.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48142170 48156630 - MGP_NODShiLtJ_P0019440 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019441.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48142332 48157378 - MGP_NODShiLtJ_P0019441 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019442.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48143204 48157346 - MGP_NODShiLtJ_P0019442 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019443.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48143320 48156958 - MGP_NODShiLtJ_P0019443 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019444.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48143806 48157359 - MGP_NODShiLtJ_P0019444 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019445.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48143812 48157382 - MGP_NODShiLtJ_P0019445 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0019446.1 MGP_NODShiLtJ_G0015852.1 mouse_genomes_project 1 48143818 48154957 - MGP_NODShiLtJ_P0019446 Tex30 protein_coding protein_coding MGP_NODShiLtJ_T0005732.1 MGP_NODShiLtJ_G0004802.1 mouse_genomes_project 1 83135722 83236882 - Gm29183 lincRNA lincRNA MGP_NODShiLtJ_T0099817.1 MGP_NODShiLtJ_G0038211.1 mouse_genomes_project 1 185590538 185590615 + Snord80 snoRNA snoRNA MGP_NODShiLtJ_T0012171.1 MGP_NODShiLtJ_G0010279.1 mouse_genomes_project 1 178864033 178864244 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098590.1 MGP_NODShiLtJ_G0036984.1 mouse_genomes_project 1 205256092 205256259 + Gm24405 snRNA snRNA MGP_NODShiLtJ_T0000460.1 MGP_NODShiLtJ_G0000396.1 mouse_genomes_project 1 60368363 60369820 + TEC TEC MGP_NODShiLtJ_T0011908.1 MGP_NODShiLtJ_G0010016.1 mouse_genomes_project 1 58067767 58070716 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021074.1 MGP_NODShiLtJ_G0016167.1 mouse_genomes_project 1 102358485 102359405 + MGP_NODShiLtJ_P0021074 Prlh protein_coding protein_coding MGP_NODShiLtJ_T0020789.1 MGP_NODShiLtJ_G0016100.1 mouse_genomes_project 1 95826392 95850758 - MGP_NODShiLtJ_P0020789 protein_coding protein_coding MGP_NODShiLtJ_T0011753.1 MGP_NODShiLtJ_G0009861.1 mouse_genomes_project 1 5018879 5019057 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002706.1 MGP_NODShiLtJ_G0002575.1 mouse_genomes_project 1 8411962 8422723 + Gm15818 antisense antisense MGP_NODShiLtJ_T0009413.1 MGP_NODShiLtJ_G0007546.1 mouse_genomes_project 1 84389607 84389671 - Mir375 miRNA miRNA MGP_NODShiLtJ_T0000754.1 MGP_NODShiLtJ_G0000687.1 mouse_genomes_project 1 209387133 209387891 - TEC TEC MGP_NODShiLtJ_T0000755.1 MGP_NODShiLtJ_G0000687.1 mouse_genomes_project 1 209387488 209387890 - TEC TEC MGP_NODShiLtJ_T0002764.1 MGP_NODShiLtJ_G0002620.1 mouse_genomes_project 1 66255214 66257559 + G730003C15Rik antisense antisense MGP_NODShiLtJ_T0002765.1 MGP_NODShiLtJ_G0002620.1 mouse_genomes_project 1 66255214 66257561 + G730003C15Rik antisense antisense MGP_NODShiLtJ_T0009449.1 MGP_NODShiLtJ_G0007582.1 mouse_genomes_project 1 174966004 174966062 + Mir7682 miRNA miRNA MGP_NODShiLtJ_T0009386.1 MGP_NODShiLtJ_G0007519.1 mouse_genomes_project 1 32300075 32300185 + Gm23771 miRNA miRNA MGP_NODShiLtJ_T0000556.1 MGP_NODShiLtJ_G0000492.1 mouse_genomes_project 1 103480078 103482584 - TEC TEC MGP_NODShiLtJ_T0000611.1 MGP_NODShiLtJ_G0000547.1 mouse_genomes_project 1 150067732 150073601 - TEC TEC MGP_NODShiLtJ_T0021934.1 MGP_NODShiLtJ_G0016355.1 mouse_genomes_project 1 152518793 152541219 + MGP_NODShiLtJ_P0021934 protein_coding protein_coding MGP_NODShiLtJ_T0021935.1 MGP_NODShiLtJ_G0016355.1 mouse_genomes_project 1 152518793 152541253 + MGP_NODShiLtJ_P0021935 protein_coding protein_coding MGP_NODShiLtJ_T0021940.1 MGP_NODShiLtJ_G0016355.1 mouse_genomes_project 1 152534200 152541253 + MGP_NODShiLtJ_P0021940 protein_coding protein_coding MGP_NODShiLtJ_T0021434.1 MGP_NODShiLtJ_G0016246.1 mouse_genomes_project 1 121462885 121492446 + MGP_NODShiLtJ_P0021434 Serpinb5 protein_coding protein_coding MGP_NODShiLtJ_T0021435.1 MGP_NODShiLtJ_G0016246.1 mouse_genomes_project 1 121462886 121489441 + MGP_NODShiLtJ_P0021435 Serpinb5 protein_coding protein_coding MGP_NODShiLtJ_T0021436.1 MGP_NODShiLtJ_G0016246.1 mouse_genomes_project 1 121462915 121492446 + MGP_NODShiLtJ_P0021436 Serpinb5 protein_coding protein_coding MGP_NODShiLtJ_T0021437.1 MGP_NODShiLtJ_G0016246.1 mouse_genomes_project 1 121474992 121492445 + MGP_NODShiLtJ_P0021437 Serpinb5 protein_coding protein_coding MGP_NODShiLtJ_T0018987.1 MGP_NODShiLtJ_G0015767.1 mouse_genomes_project 1 36470481 36703512 - MGP_NODShiLtJ_P0018987 Prim2 protein_coding protein_coding MGP_NODShiLtJ_T0018988.1 MGP_NODShiLtJ_G0015767.1 mouse_genomes_project 1 36497461 36650876 - Prim2 protein_coding retained_intron MGP_NODShiLtJ_T0018989.1 MGP_NODShiLtJ_G0015767.1 mouse_genomes_project 1 36649618 36652066 - Prim2 protein_coding retained_intron MGP_NODShiLtJ_T0011904.1 MGP_NODShiLtJ_G0010012.1 mouse_genomes_project 1 56009630 56010381 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011984.1 MGP_NODShiLtJ_G0010092.1 mouse_genomes_project 1 85022048 85022540 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019978.1 MGP_NODShiLtJ_G0015949.1 mouse_genomes_project 1 70242904 70281790 + Nrp2 protein_coding retained_intron MGP_NODShiLtJ_T0019979.1 MGP_NODShiLtJ_G0015949.1 mouse_genomes_project 1 70242904 70365650 + MGP_NODShiLtJ_P0019979 Nrp2 protein_coding protein_coding MGP_NODShiLtJ_T0019980.1 MGP_NODShiLtJ_G0015949.1 mouse_genomes_project 1 70242904 70365650 + MGP_NODShiLtJ_P0019980 Nrp2 protein_coding protein_coding MGP_NODShiLtJ_T0019981.1 MGP_NODShiLtJ_G0015949.1 mouse_genomes_project 1 70243321 70340743 + MGP_NODShiLtJ_P0019981 Nrp2 protein_coding protein_coding MGP_NODShiLtJ_T0019982.1 MGP_NODShiLtJ_G0015949.1 mouse_genomes_project 1 70243321 70342990 + MGP_NODShiLtJ_P0019982 Nrp2 protein_coding protein_coding MGP_NODShiLtJ_T0019983.1 MGP_NODShiLtJ_G0015949.1 mouse_genomes_project 1 70243321 70365650 + MGP_NODShiLtJ_P0019983 Nrp2 protein_coding protein_coding MGP_NODShiLtJ_T0019984.1 MGP_NODShiLtJ_G0015949.1 mouse_genomes_project 1 70243321 70365650 + MGP_NODShiLtJ_P0019984 Nrp2 protein_coding protein_coding MGP_NODShiLtJ_T0005893.1 MGP_NODShiLtJ_G0004935.1 mouse_genomes_project 1 180944540 181032404 - Gm28694 lincRNA lincRNA MGP_NODShiLtJ_T0011813.1 MGP_NODShiLtJ_G0009921.1 mouse_genomes_project 1 25765895 25766338 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023483.1 MGP_NODShiLtJ_G0016701.1 mouse_genomes_project 1 200509300 200516682 + MGP_NODShiLtJ_P0023483 Olfr414 protein_coding protein_coding MGP_NODShiLtJ_T0023484.1 MGP_NODShiLtJ_G0016701.1 mouse_genomes_project 1 200515560 200516515 + MGP_NODShiLtJ_P0023484 Olfr414 protein_coding protein_coding MGP_NODShiLtJ_T0005993.1 MGP_NODShiLtJ_G0005013.1 mouse_genomes_project 1 219088967 219117406 - Gm32200 lincRNA lincRNA MGP_NODShiLtJ_T0098221.1 MGP_NODShiLtJ_G0036633.1 mouse_genomes_project 1 57972123 57973400 - Gm29453 sense_intronic sense_intronic MGP_NODShiLtJ_T0000344.1 MGP_NODShiLtJ_G0000282.1 mouse_genomes_project 1 199519 200588 + TEC TEC MGP_NODShiLtJ_T0099792.1 MGP_NODShiLtJ_G0038186.1 mouse_genomes_project 1 140448750 140448894 + Gm25771 snoRNA snoRNA MGP_NODShiLtJ_T0000662.1 MGP_NODShiLtJ_G0000596.1 mouse_genomes_project 1 174969014 174971451 + TEC TEC MGP_NODShiLtJ_T0011805.1 MGP_NODShiLtJ_G0009913.1 mouse_genomes_project 1 22388090 22388537 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000527.1 MGP_NODShiLtJ_G0000463.1 mouse_genomes_project 1 93416975 93417944 - TEC TEC MGP_NODShiLtJ_T0000746.1 MGP_NODShiLtJ_G0000679.1 mouse_genomes_project 1 207183104 207186175 + TEC TEC MGP_NODShiLtJ_T0023852.1 MGP_NODShiLtJ_G0016777.1 mouse_genomes_project 1 211803568 211813888 - MGP_NODShiLtJ_P0023852 Hlx protein_coding protein_coding MGP_NODShiLtJ_T0023853.1 MGP_NODShiLtJ_G0016777.1 mouse_genomes_project 1 211803575 211809270 - MGP_NODShiLtJ_P0023853 Hlx protein_coding protein_coding MGP_NODShiLtJ_T0016868.1 MGP_NODShiLtJ_G0014965.1 mouse_genomes_project 1 46634504 46640831 - Pantr2 processed_transcript lincRNA MGP_NODShiLtJ_T0016869.1 MGP_NODShiLtJ_G0014965.1 mouse_genomes_project 1 46634515 46635496 - Pantr2 processed_transcript TEC MGP_NODShiLtJ_T0000690.1 MGP_NODShiLtJ_G0000624.1 mouse_genomes_project 1 184581522 184583396 + TEC TEC MGP_NODShiLtJ_T0021595.1 MGP_NODShiLtJ_G0016283.1 mouse_genomes_project 1 139227412 139248430 - MGP_NODShiLtJ_P0021595 Htr5b protein_coding protein_coding MGP_NODShiLtJ_T0000671.1 MGP_NODShiLtJ_G0000605.1 mouse_genomes_project 1 179790101 179790848 - TEC TEC MGP_NODShiLtJ_T0011847.1 MGP_NODShiLtJ_G0009955.1 mouse_genomes_project 1 37748648 37750044 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0019758.1 MGP_NODShiLtJ_G0015912.1 mouse_genomes_project 1 65186798 65247155 + MGP_NODShiLtJ_P0019758 Aox4 protein_coding protein_coding MGP_NODShiLtJ_T0019759.1 MGP_NODShiLtJ_G0015912.1 mouse_genomes_project 1 65186833 65238643 + Aox4 protein_coding processed_transcript MGP_NODShiLtJ_T0019760.1 MGP_NODShiLtJ_G0015912.1 mouse_genomes_project 1 65186852 65191812 + Aox4 protein_coding processed_transcript MGP_NODShiLtJ_T0019761.1 MGP_NODShiLtJ_G0015912.1 mouse_genomes_project 1 65187619 65189764 + Aox4 protein_coding retained_intron MGP_NODShiLtJ_T0019762.1 MGP_NODShiLtJ_G0015912.1 mouse_genomes_project 1 65217882 65222418 + Aox4 protein_coding retained_intron MGP_NODShiLtJ_T0023814.1 MGP_NODShiLtJ_G0016769.1 mouse_genomes_project 1 210062529 210218126 - MGP_NODShiLtJ_P0023814 Disp1 protein_coding protein_coding MGP_NODShiLtJ_T0023815.1 MGP_NODShiLtJ_G0016769.1 mouse_genomes_project 1 210062529 210135631 - MGP_NODShiLtJ_P0023815 Disp1 protein_coding protein_coding MGP_NODShiLtJ_T0023816.1 MGP_NODShiLtJ_G0016769.1 mouse_genomes_project 1 210062529 210218121 - MGP_NODShiLtJ_P0023816 Disp1 protein_coding protein_coding MGP_NODShiLtJ_T0023817.1 MGP_NODShiLtJ_G0016769.1 mouse_genomes_project 1 210072474 210135701 - Disp1 protein_coding retained_intron MGP_NODShiLtJ_T0023818.1 MGP_NODShiLtJ_G0016769.1 mouse_genomes_project 1 210119805 210218158 - MGP_NODShiLtJ_P0023818 Disp1 protein_coding protein_coding MGP_NODShiLtJ_T0012003.1 MGP_NODShiLtJ_G0010111.1 mouse_genomes_project 1 93370635 93371275 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016904.1 MGP_NODShiLtJ_G0014981.1 mouse_genomes_project 1 151598903 151612142 - 6030442K20Rik processed_transcript antisense MGP_NODShiLtJ_T0016905.1 MGP_NODShiLtJ_G0014981.1 mouse_genomes_project 1 151611155 151612161 - 6030442K20Rik processed_transcript retained_intron MGP_NODShiLtJ_T0000480.1 MGP_NODShiLtJ_G0000416.1 mouse_genomes_project 1 69089122 69091858 + TEC TEC MGP_NODShiLtJ_T0019748.1 MGP_NODShiLtJ_G0015909.1 mouse_genomes_project 1 64962139 64993579 + MGP_NODShiLtJ_P0019748 Sgol2a protein_coding protein_coding MGP_NODShiLtJ_T0019749.1 MGP_NODShiLtJ_G0015909.1 mouse_genomes_project 1 64990395 64993578 + Sgol2a protein_coding retained_intron MGP_NODShiLtJ_T0012065.1 MGP_NODShiLtJ_G0010173.1 mouse_genomes_project 1 126150949 126151487 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018944.1 MGP_NODShiLtJ_G0015757.1 mouse_genomes_project 1 25135123 25170226 + MGP_NODShiLtJ_P0018944 Lmbrd1 protein_coding protein_coding MGP_NODShiLtJ_T0018945.1 MGP_NODShiLtJ_G0015757.1 mouse_genomes_project 1 25135202 25197378 + MGP_NODShiLtJ_P0018945 Lmbrd1 protein_coding protein_coding MGP_NODShiLtJ_T0018946.1 MGP_NODShiLtJ_G0015757.1 mouse_genomes_project 1 25135220 25236114 + MGP_NODShiLtJ_P0018946 Lmbrd1 protein_coding protein_coding MGP_NODShiLtJ_T0018947.1 MGP_NODShiLtJ_G0015757.1 mouse_genomes_project 1 25194125 25211502 + Lmbrd1 protein_coding retained_intron MGP_NODShiLtJ_T0018948.1 MGP_NODShiLtJ_G0015757.1 mouse_genomes_project 1 25211426 25232218 + MGP_NODShiLtJ_P0018948 Lmbrd1 protein_coding protein_coding MGP_NODShiLtJ_T0019323.1 MGP_NODShiLtJ_G0015826.1 mouse_genomes_project 1 43168353 43202342 - MGP_NODShiLtJ_P0019323 Creg2 protein_coding protein_coding MGP_NODShiLtJ_T0000455.1 MGP_NODShiLtJ_G0000391.1 mouse_genomes_project 1 51685938 51689808 - TEC TEC MGP_NODShiLtJ_T0099731.1 MGP_NODShiLtJ_G0038125.1 mouse_genomes_project 1 5091338 5091468 + Gm23274 snoRNA snoRNA MGP_NODShiLtJ_T0000560.1 MGP_NODShiLtJ_G0000496.1 mouse_genomes_project 1 108692843 108695137 + TEC TEC MGP_NODShiLtJ_T0011973.1 MGP_NODShiLtJ_G0010081.1 mouse_genomes_project 1 78197669 78198420 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012053.1 MGP_NODShiLtJ_G0010161.1 mouse_genomes_project 1 120519588 120520122 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002870.1 MGP_NODShiLtJ_G0002698.1 mouse_genomes_project 1 179080862 179082718 + Gm37622 antisense antisense MGP_NODShiLtJ_T0023482.1 MGP_NODShiLtJ_G0016700.1 mouse_genomes_project 1 200485360 200486370 + MGP_NODShiLtJ_P0023482 Olfr248 protein_coding protein_coding MGP_NODShiLtJ_T0009383.1 MGP_NODShiLtJ_G0007516.1 mouse_genomes_project 1 31276888 31276976 + Gm22679 miRNA miRNA MGP_NODShiLtJ_T0009415.1 MGP_NODShiLtJ_G0007548.1 mouse_genomes_project 1 86048095 86048179 + Mir6343 miRNA miRNA MGP_NODShiLtJ_T0002921.1 MGP_NODShiLtJ_G0002740.1 mouse_genomes_project 1 207660866 207663950 + H3f3aos antisense antisense MGP_NODShiLtJ_T0002922.1 MGP_NODShiLtJ_G0002740.1 mouse_genomes_project 1 207660874 207663779 + H3f3aos antisense antisense MGP_NODShiLtJ_T0002878.1 MGP_NODShiLtJ_G0002706.1 mouse_genomes_project 1 185583516 185584391 + Gm37362 antisense antisense MGP_NODShiLtJ_T0000548.1 MGP_NODShiLtJ_G0000484.1 mouse_genomes_project 1 100784279 100786660 + TEC TEC MGP_NODShiLtJ_T0005749.1 MGP_NODShiLtJ_G0004816.1 mouse_genomes_project 1 90409568 90441055 + 1700016L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0005750.1 MGP_NODShiLtJ_G0004816.1 mouse_genomes_project 1 90409576 90445262 + 1700016L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0021441.1 MGP_NODShiLtJ_G0016248.1 mouse_genomes_project 1 121597690 121621318 + MGP_NODShiLtJ_P0021441 Serpinb13 protein_coding protein_coding MGP_NODShiLtJ_T0021442.1 MGP_NODShiLtJ_G0016248.1 mouse_genomes_project 1 121597700 121621021 + MGP_NODShiLtJ_P0021442 Serpinb13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098508.1 MGP_NODShiLtJ_G0036902.1 mouse_genomes_project 1 9018833 9018940 - Gm25253 snRNA snRNA MGP_NODShiLtJ_T0018851.1 MGP_NODShiLtJ_G0015731.1 mouse_genomes_project 1 17530384 17567034 - Crisp4 protein_coding retained_intron MGP_NODShiLtJ_T0018852.1 MGP_NODShiLtJ_G0015731.1 mouse_genomes_project 1 17530384 17567040 - MGP_NODShiLtJ_P0018852 Crisp4 protein_coding protein_coding MGP_NODShiLtJ_T0018853.1 MGP_NODShiLtJ_G0015731.1 mouse_genomes_project 1 17530397 17556457 - MGP_NODShiLtJ_P0018853 Crisp4 protein_coding protein_coding MGP_NODShiLtJ_T0018854.1 MGP_NODShiLtJ_G0015731.1 mouse_genomes_project 1 17530793 17567040 - MGP_NODShiLtJ_P0018854 Crisp4 protein_coding protein_coding MGP_NODShiLtJ_T0000536.1 MGP_NODShiLtJ_G0000472.1 mouse_genomes_project 1 97359725 97361979 + TEC TEC MGP_NODShiLtJ_T0011883.1 MGP_NODShiLtJ_G0009991.1 mouse_genomes_project 1 50163478 50164640 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023507.1 MGP_NODShiLtJ_G0016707.1 mouse_genomes_project 1 201815685 201856680 + MGP_NODShiLtJ_P0023507 Kmo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023508.1 MGP_NODShiLtJ_G0016707.1 mouse_genomes_project 1 201827291 201857571 + MGP_NODShiLtJ_P0023508 Kmo protein_coding protein_coding MGP_NODShiLtJ_T0023509.1 MGP_NODShiLtJ_G0016707.1 mouse_genomes_project 1 201827296 201850787 + Kmo protein_coding retained_intron MGP_NODShiLtJ_T0023510.1 MGP_NODShiLtJ_G0016707.1 mouse_genomes_project 1 201827321 201833939 + Kmo protein_coding processed_transcript MGP_NODShiLtJ_T0023511.1 MGP_NODShiLtJ_G0016707.1 mouse_genomes_project 1 201827475 201858785 + MGP_NODShiLtJ_P0023511 Kmo protein_coding protein_coding MGP_NODShiLtJ_T0023512.1 MGP_NODShiLtJ_G0016707.1 mouse_genomes_project 1 201827515 201857573 + MGP_NODShiLtJ_P0023512 Kmo protein_coding unknown_likely_coding MGP_NODShiLtJ_T0023513.1 MGP_NODShiLtJ_G0016707.1 mouse_genomes_project 1 201827534 201846355 + Kmo protein_coding processed_transcript MGP_NODShiLtJ_T0012177.1 MGP_NODShiLtJ_G0010285.1 mouse_genomes_project 1 181467203 181467605 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0022537.1 MGP_NODShiLtJ_G0016482.1 mouse_genomes_project 1 179061897 179063408 - BC034090 protein_coding retained_intron MGP_NODShiLtJ_T0022538.1 MGP_NODShiLtJ_G0016482.1 mouse_genomes_project 1 179062946 179096226 - MGP_NODShiLtJ_P0022538 BC034090 protein_coding protein_coding MGP_NODShiLtJ_T0022539.1 MGP_NODShiLtJ_G0016482.1 mouse_genomes_project 1 179066947 179074984 - BC034090 protein_coding processed_transcript MGP_NODShiLtJ_T0022540.1 MGP_NODShiLtJ_G0016482.1 mouse_genomes_project 1 179067697 179074733 - BC034090 protein_coding processed_transcript MGP_NODShiLtJ_T0022541.1 MGP_NODShiLtJ_G0016482.1 mouse_genomes_project 1 179075248 179079453 - BC034090 protein_coding processed_transcript MGP_NODShiLtJ_T0022542.1 MGP_NODShiLtJ_G0016482.1 mouse_genomes_project 1 179075598 179082470 - MGP_NODShiLtJ_P0022542 BC034090 protein_coding protein_coding MGP_NODShiLtJ_T0022543.1 MGP_NODShiLtJ_G0016482.1 mouse_genomes_project 1 179075682 179092957 - BC034090 protein_coding retained_intron MGP_NODShiLtJ_T0022544.1 MGP_NODShiLtJ_G0016482.1 mouse_genomes_project 1 179078672 179081463 - BC034090 protein_coding retained_intron MGP_NODShiLtJ_T0000761.1 MGP_NODShiLtJ_G0000693.1 mouse_genomes_project 1 213287037 213287230 - TEC TEC MGP_NODShiLtJ_T0011992.1 MGP_NODShiLtJ_G0010100.1 mouse_genomes_project 1 89802750 89804564 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018794.1 MGP_NODShiLtJ_G0015720.1 mouse_genomes_project 1 15156036 15157387 - Rpl7 protein_coding processed_transcript MGP_NODShiLtJ_T0018795.1 MGP_NODShiLtJ_G0015720.1 mouse_genomes_project 1 15156036 15159964 - MGP_NODShiLtJ_P0018795 Rpl7 protein_coding protein_coding MGP_NODShiLtJ_T0018796.1 MGP_NODShiLtJ_G0015720.1 mouse_genomes_project 1 15156047 15159707 - Rpl7 protein_coding retained_intron MGP_NODShiLtJ_T0018797.1 MGP_NODShiLtJ_G0015720.1 mouse_genomes_project 1 15156269 15158153 - Rpl7 protein_coding retained_intron MGP_NODShiLtJ_T0018798.1 MGP_NODShiLtJ_G0015720.1 mouse_genomes_project 1 15156521 15159532 - MGP_NODShiLtJ_P0018798 Rpl7 protein_coding protein_coding MGP_NODShiLtJ_T0018799.1 MGP_NODShiLtJ_G0015720.1 mouse_genomes_project 1 15157795 15159689 - Rpl7 protein_coding retained_intron MGP_NODShiLtJ_T0099785.1 MGP_NODShiLtJ_G0038179.1 mouse_genomes_project 1 117222572 117222714 - Gm23965 snoRNA snoRNA MGP_NODShiLtJ_T0012098.1 MGP_NODShiLtJ_G0010206.1 mouse_genomes_project 1 139367555 139367738 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098502.1 MGP_NODShiLtJ_G0036896.1 mouse_genomes_project 1 995003 995061 - Gm27396 snRNA snRNA MGP_NODShiLtJ_T0005901.1 MGP_NODShiLtJ_G0004940.1 mouse_genomes_project 1 185303446 185305964 + Gm37083 lincRNA lincRNA MGP_NODShiLtJ_T0018542.1 MGP_NODShiLtJ_G0015676.1 mouse_genomes_project 1 1612568 1758577 - MGP_NODShiLtJ_P0018542 Rp1 protein_coding protein_coding MGP_NODShiLtJ_T0018543.1 MGP_NODShiLtJ_G0015676.1 mouse_genomes_project 1 1688137 1705272 - MGP_NODShiLtJ_P0018543 Rp1 protein_coding protein_coding MGP_NODShiLtJ_T0000784.1 MGP_NODShiLtJ_G0000715.1 mouse_genomes_project 1 222528344 222531733 + TEC TEC MGP_NODShiLtJ_T0022706.1 MGP_NODShiLtJ_G0016508.1 mouse_genomes_project 1 183849048 184280926 + MGP_NODShiLtJ_P0022706 Tnr protein_coding protein_coding MGP_NODShiLtJ_T0022707.1 MGP_NODShiLtJ_G0016508.1 mouse_genomes_project 1 183849120 184076911 + Tnr protein_coding retained_intron MGP_NODShiLtJ_T0022708.1 MGP_NODShiLtJ_G0016508.1 mouse_genomes_project 1 184076625 184273594 + MGP_NODShiLtJ_P0022708 Tnr protein_coding protein_coding MGP_NODShiLtJ_T0022709.1 MGP_NODShiLtJ_G0016508.1 mouse_genomes_project 1 184117002 184197742 + MGP_NODShiLtJ_P0022709 Tnr protein_coding protein_coding MGP_NODShiLtJ_T0022710.1 MGP_NODShiLtJ_G0016508.1 mouse_genomes_project 1 184197446 184275403 + MGP_NODShiLtJ_P0022710 Tnr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022711.1 MGP_NODShiLtJ_G0016508.1 mouse_genomes_project 1 184197796 184211027 + MGP_NODShiLtJ_P0022711 Tnr protein_coding protein_coding MGP_NODShiLtJ_T0005783.1 MGP_NODShiLtJ_G0004847.1 mouse_genomes_project 1 104209116 104212085 - Gm29483 lincRNA lincRNA MGP_NODShiLtJ_T0021420.1 MGP_NODShiLtJ_G0016242.1 mouse_genomes_project 1 120740863 120978532 + MGP_NODShiLtJ_P0021420 Phlpp1 protein_coding protein_coding MGP_NODShiLtJ_T0021421.1 MGP_NODShiLtJ_G0016242.1 mouse_genomes_project 1 120862651 120868648 + Phlpp1 protein_coding retained_intron MGP_NODShiLtJ_T0021422.1 MGP_NODShiLtJ_G0016242.1 mouse_genomes_project 1 120891617 120893381 + Phlpp1 protein_coding processed_transcript MGP_NODShiLtJ_T0011129.1 MGP_NODShiLtJ_G0009262.1 mouse_genomes_project 1 31250766 31250878 - Gm25586 misc_RNA misc_RNA MGP_NODShiLtJ_T0023009.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190889767 190960667 - MGP_NODShiLtJ_P0023009 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023010.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190889767 191032810 - MGP_NODShiLtJ_P0023010 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023011.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900036 190938619 - MGP_NODShiLtJ_P0023011 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023012.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900070 191032754 - MGP_NODShiLtJ_P0023012 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023013.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900070 191032750 - MGP_NODShiLtJ_P0023013 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023014.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900074 190960667 - MGP_NODShiLtJ_P0023014 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023015.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900101 190904774 - MGP_NODShiLtJ_P0023015 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023016.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900197 190916781 - Pou2f1 protein_coding retained_intron MGP_NODShiLtJ_T0023017.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900221 191032761 - MGP_NODShiLtJ_P0023017 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023018.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900295 190960619 - MGP_NODShiLtJ_P0023018 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023019.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190900351 190957283 - MGP_NODShiLtJ_P0023019 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023020.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190904540 190960730 - Pou2f1 protein_coding retained_intron MGP_NODShiLtJ_T0023021.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190904695 190960658 - Pou2f1 protein_coding retained_intron MGP_NODShiLtJ_T0023022.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190915727 191032747 - Pou2f1 protein_coding retained_intron MGP_NODShiLtJ_T0023023.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190936658 191032745 - MGP_NODShiLtJ_P0023023 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0023024.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190955178 191032761 - Pou2f1 protein_coding retained_intron MGP_NODShiLtJ_T0023025.1 MGP_NODShiLtJ_G0016569.1 mouse_genomes_project 1 190957262 191032741 - MGP_NODShiLtJ_P0023025 Pou2f1 protein_coding protein_coding MGP_NODShiLtJ_T0019420.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 47972465 47989120 + Tpp2 protein_coding processed_transcript MGP_NODShiLtJ_T0019421.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 47972825 48052899 + MGP_NODShiLtJ_P0019421 Tpp2 protein_coding protein_coding MGP_NODShiLtJ_T0019422.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 47972832 47998138 + Tpp2 protein_coding retained_intron MGP_NODShiLtJ_T0019423.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 47972833 47998138 + Tpp2 protein_coding retained_intron MGP_NODShiLtJ_T0019424.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 47972833 48052928 + MGP_NODShiLtJ_P0019424 Tpp2 protein_coding protein_coding MGP_NODShiLtJ_T0019425.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 47972851 48039374 + MGP_NODShiLtJ_P0019425 Tpp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019426.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 47972863 48039355 + MGP_NODShiLtJ_P0019426 Tpp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019427.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 48017043 48023552 + MGP_NODShiLtJ_P0019427 Tpp2 protein_coding protein_coding MGP_NODShiLtJ_T0019428.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 48031721 48052928 + MGP_NODShiLtJ_P0019428 Tpp2 protein_coding protein_coding MGP_NODShiLtJ_T0019429.1 MGP_NODShiLtJ_G0015849.1 mouse_genomes_project 1 48049888 48052264 + Tpp2 protein_coding retained_intron MGP_NODShiLtJ_T0022398.1 MGP_NODShiLtJ_G0016453.1 mouse_genomes_project 1 174984625 175003280 - MGP_NODShiLtJ_P0022398 Rnf2 protein_coding protein_coding MGP_NODShiLtJ_T0022399.1 MGP_NODShiLtJ_G0016453.1 mouse_genomes_project 1 174996360 175027982 - MGP_NODShiLtJ_P0022399 Rnf2 protein_coding protein_coding MGP_NODShiLtJ_T0022400.1 MGP_NODShiLtJ_G0016453.1 mouse_genomes_project 1 174996361 175028122 - MGP_NODShiLtJ_P0022400 Rnf2 protein_coding protein_coding MGP_NODShiLtJ_T0022401.1 MGP_NODShiLtJ_G0016453.1 mouse_genomes_project 1 174998081 175028004 - MGP_NODShiLtJ_P0022401 Rnf2 protein_coding protein_coding MGP_NODShiLtJ_T0022402.1 MGP_NODShiLtJ_G0016453.1 mouse_genomes_project 1 174998113 174998992 - Rnf2 protein_coding retained_intron MGP_NODShiLtJ_T0022403.1 MGP_NODShiLtJ_G0016453.1 mouse_genomes_project 1 174998278 175001237 - Rnf2 protein_coding processed_transcript MGP_NODShiLtJ_T0022404.1 MGP_NODShiLtJ_G0016453.1 mouse_genomes_project 1 175004018 175027965 - MGP_NODShiLtJ_P0022404 Rnf2 protein_coding protein_coding MGP_NODShiLtJ_T0005933.1 MGP_NODShiLtJ_G0004967.1 mouse_genomes_project 1 196902301 196919978 - Gm26641 lincRNA lincRNA MGP_NODShiLtJ_T0018949.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25585510 25771913 - MGP_NODShiLtJ_P0018949 protein_coding protein_coding MGP_NODShiLtJ_T0018950.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25585584 26496397 - MGP_NODShiLtJ_P0018950 protein_coding protein_coding MGP_NODShiLtJ_T0018951.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25585584 26496591 - MGP_NODShiLtJ_P0018951 protein_coding protein_coding MGP_NODShiLtJ_T0018952.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25585584 26493045 - MGP_NODShiLtJ_P0018952 protein_coding protein_coding MGP_NODShiLtJ_T0018953.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25585712 26493666 - MGP_NODShiLtJ_P0018953 protein_coding protein_coding MGP_NODShiLtJ_T0018954.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25585725 25772187 - protein_coding retained_intron MGP_NODShiLtJ_T0018955.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25655498 25743822 - protein_coding processed_transcript MGP_NODShiLtJ_T0018956.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25742013 25744794 - protein_coding retained_intron MGP_NODShiLtJ_T0018957.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 25759667 25771914 - protein_coding retained_intron MGP_NODShiLtJ_T0018958.1 MGP_NODShiLtJ_G0015758.1 mouse_genomes_project 1 26084541 26493253 - protein_coding retained_intron MGP_NODShiLtJ_T0101501.1 MGP_NODShiLtJ_G0039671.1 mouse_genomes_project 1 153877525 153881683 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0021472.1 MGP_NODShiLtJ_G0016259.1 mouse_genomes_project 1 128173895 128179961 - Dsel protein_coding processed_transcript MGP_NODShiLtJ_T0021473.1 MGP_NODShiLtJ_G0016259.1 mouse_genomes_project 1 128173899 128180111 - MGP_NODShiLtJ_P0021473 Dsel protein_coding protein_coding MGP_NODShiLtJ_T0021474.1 MGP_NODShiLtJ_G0016259.1 mouse_genomes_project 1 128178516 128180076 - Dsel protein_coding processed_transcript MGP_NODShiLtJ_T0021475.1 MGP_NODShiLtJ_G0016259.1 mouse_genomes_project 1 128179288 128180073 - Dsel protein_coding processed_transcript MGP_NODShiLtJ_T0023158.1 MGP_NODShiLtJ_G0016609.1 mouse_genomes_project 1 196449021 196471321 - Fcgr3 protein_coding retained_intron MGP_NODShiLtJ_T0023159.1 MGP_NODShiLtJ_G0016609.1 mouse_genomes_project 1 196449022 196485792 - MGP_NODShiLtJ_P0023159 Fcgr3 protein_coding protein_coding MGP_NODShiLtJ_T0023160.1 MGP_NODShiLtJ_G0016609.1 mouse_genomes_project 1 196449049 196485792 - MGP_NODShiLtJ_P0023160 Fcgr3 protein_coding protein_coding MGP_NODShiLtJ_T0023161.1 MGP_NODShiLtJ_G0016609.1 mouse_genomes_project 1 196471094 196521956 - MGP_NODShiLtJ_P0023161 Fcgr3 protein_coding protein_coding MGP_NODShiLtJ_T0099754.1 MGP_NODShiLtJ_G0038148.1 mouse_genomes_project 1 47946658 47946783 + Gm26352 snoRNA snoRNA MGP_NODShiLtJ_T0019633.1 MGP_NODShiLtJ_G0015888.1 mouse_genomes_project 1 60386044 60796727 - MGP_NODShiLtJ_P0019633 Hecw2 protein_coding protein_coding MGP_NODShiLtJ_T0019634.1 MGP_NODShiLtJ_G0015888.1 mouse_genomes_project 1 60386050 60797713 - MGP_NODShiLtJ_P0019634 Hecw2 protein_coding protein_coding MGP_NODShiLtJ_T0019635.1 MGP_NODShiLtJ_G0015888.1 mouse_genomes_project 1 60414927 60423019 - Hecw2 protein_coding processed_transcript MGP_NODShiLtJ_T0019636.1 MGP_NODShiLtJ_G0015888.1 mouse_genomes_project 1 60420864 60448245 - Hecw2 protein_coding processed_transcript MGP_NODShiLtJ_T0019637.1 MGP_NODShiLtJ_G0015888.1 mouse_genomes_project 1 60515841 60797713 - MGP_NODShiLtJ_P0019637 Hecw2 protein_coding protein_coding MGP_NODShiLtJ_T0019638.1 MGP_NODShiLtJ_G0015888.1 mouse_genomes_project 1 60527265 60797847 - Hecw2 protein_coding retained_intron MGP_NODShiLtJ_T0021194.1 MGP_NODShiLtJ_G0016194.1 mouse_genomes_project 1 104135610 104140234 - MGP_NODShiLtJ_P0021194 Otos protein_coding protein_coding MGP_NODShiLtJ_T0021195.1 MGP_NODShiLtJ_G0016194.1 mouse_genomes_project 1 104135611 104139647 - Otos protein_coding retained_intron MGP_NODShiLtJ_T0011736.1 MGP_NODShiLtJ_G0009844.1 mouse_genomes_project 1 2100451 2101921 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000657.1 MGP_NODShiLtJ_G0000591.1 mouse_genomes_project 1 169896231 169905062 + TEC TEC MGP_NODShiLtJ_T0022261.1 MGP_NODShiLtJ_G0016425.1 mouse_genomes_project 1 159324815 159370180 + MGP_NODShiLtJ_P0022261 Aspm protein_coding protein_coding MGP_NODShiLtJ_T0022262.1 MGP_NODShiLtJ_G0016425.1 mouse_genomes_project 1 159324816 159348722 + Aspm protein_coding retained_intron MGP_NODShiLtJ_T0022263.1 MGP_NODShiLtJ_G0016425.1 mouse_genomes_project 1 159324818 159370183 + MGP_NODShiLtJ_P0022263 Aspm protein_coding protein_coding MGP_NODShiLtJ_T0022264.1 MGP_NODShiLtJ_G0016425.1 mouse_genomes_project 1 159324862 159327178 + Aspm protein_coding retained_intron MGP_NODShiLtJ_T0022265.1 MGP_NODShiLtJ_G0016425.1 mouse_genomes_project 1 159357918 159363486 + Aspm protein_coding processed_transcript MGP_NODShiLtJ_T0018800.1 MGP_NODShiLtJ_G0015721.1 mouse_genomes_project 1 15161071 15189022 + MGP_NODShiLtJ_P0018800 Rdh10 protein_coding protein_coding MGP_NODShiLtJ_T0018801.1 MGP_NODShiLtJ_G0015721.1 mouse_genomes_project 1 15185758 15187803 + Rdh10 protein_coding retained_intron MGP_NODShiLtJ_T0018841.1 MGP_NODShiLtJ_G0015727.1 mouse_genomes_project 1 16093900 16147957 - MGP_NODShiLtJ_P0018841 Jph1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018842.1 MGP_NODShiLtJ_G0015727.1 mouse_genomes_project 1 16138893 16254748 - MGP_NODShiLtJ_P0018842 Jph1 protein_coding protein_coding MGP_NODShiLtJ_T0002802.1 MGP_NODShiLtJ_G0002647.1 mouse_genomes_project 1 98769849 98770801 - Gm19582 antisense antisense MGP_NODShiLtJ_T0021705.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 148002366 148167144 + Thsd7b protein_coding retained_intron MGP_NODShiLtJ_T0021706.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 148002408 149092547 + MGP_NODShiLtJ_P0021706 Thsd7b protein_coding protein_coding MGP_NODShiLtJ_T0021707.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 148002527 148881560 + MGP_NODShiLtJ_P0021707 Thsd7b protein_coding protein_coding MGP_NODShiLtJ_T0021708.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 148002549 148374019 + Thsd7b protein_coding processed_transcript MGP_NODShiLtJ_T0021709.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 148274600 148374053 + MGP_NODShiLtJ_P0021709 Thsd7b protein_coding protein_coding MGP_NODShiLtJ_T0021710.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 148357443 148360211 + Thsd7b protein_coding retained_intron MGP_NODShiLtJ_T0021711.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 148718589 149046612 + Thsd7b protein_coding processed_transcript MGP_NODShiLtJ_T0021712.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 149017227 149092545 + Thsd7b protein_coding processed_transcript MGP_NODShiLtJ_T0021713.1 MGP_NODShiLtJ_G0016304.1 mouse_genomes_project 1 149017242 149018804 + Thsd7b protein_coding processed_transcript MGP_NODShiLtJ_T0018838.1 MGP_NODShiLtJ_G0015726.1 mouse_genomes_project 1 15787296 15810739 + MGP_NODShiLtJ_P0018838 Ly96 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018839.1 MGP_NODShiLtJ_G0015726.1 mouse_genomes_project 1 15787559 15791465 + Ly96 protein_coding retained_intron MGP_NODShiLtJ_T0018840.1 MGP_NODShiLtJ_G0015726.1 mouse_genomes_project 1 15788018 15810739 + MGP_NODShiLtJ_P0018840 Ly96 protein_coding protein_coding MGP_NODShiLtJ_T0002786.1 MGP_NODShiLtJ_G0002632.1 mouse_genomes_project 1 83721219 83721925 + Gm28364 antisense antisense MGP_NODShiLtJ_T0002773.1 MGP_NODShiLtJ_G0002626.1 mouse_genomes_project 1 69986617 70034099 - Pard3bos3 antisense antisense MGP_NODShiLtJ_T0023286.1 MGP_NODShiLtJ_G0016632.1 mouse_genomes_project 1 196920194 196948033 + MGP_NODShiLtJ_P0023286 F11r protein_coding protein_coding MGP_NODShiLtJ_T0023287.1 MGP_NODShiLtJ_G0016632.1 mouse_genomes_project 1 196920238 196944279 + F11r protein_coding retained_intron MGP_NODShiLtJ_T0023288.1 MGP_NODShiLtJ_G0016632.1 mouse_genomes_project 1 196946284 196947079 + F11r protein_coding retained_intron MGP_NODShiLtJ_T0022843.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187368897 187442856 - MGP_NODShiLtJ_P0022843 Prrc2c protein_coding protein_coding MGP_NODShiLtJ_T0022844.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187368899 187442887 - MGP_NODShiLtJ_P0022844 Prrc2c protein_coding protein_coding MGP_NODShiLtJ_T0022845.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187369957 187405641 - MGP_NODShiLtJ_P0022845 Prrc2c protein_coding protein_coding MGP_NODShiLtJ_T0022846.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187369960 187406067 - MGP_NODShiLtJ_P0022846 Prrc2c protein_coding protein_coding MGP_NODShiLtJ_T0022847.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187371444 187442812 - MGP_NODShiLtJ_P0022847 Prrc2c protein_coding protein_coding MGP_NODShiLtJ_T0022848.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187373152 187442881 - MGP_NODShiLtJ_P0022848 Prrc2c protein_coding protein_coding MGP_NODShiLtJ_T0022849.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187384034 187388316 - Prrc2c protein_coding retained_intron MGP_NODShiLtJ_T0022850.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187411241 187442735 - MGP_NODShiLtJ_P0022850 Prrc2c protein_coding protein_coding MGP_NODShiLtJ_T0022851.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187413676 187414891 - Prrc2c protein_coding retained_intron MGP_NODShiLtJ_T0022852.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187420765 187442828 - Prrc2c protein_coding retained_intron MGP_NODShiLtJ_T0022853.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187421418 187442681 - MGP_NODShiLtJ_P0022853 Prrc2c protein_coding protein_coding MGP_NODShiLtJ_T0022854.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187423779 187425743 - Prrc2c protein_coding retained_intron MGP_NODShiLtJ_T0022855.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187430947 187433052 - Prrc2c protein_coding retained_intron MGP_NODShiLtJ_T0022856.1 MGP_NODShiLtJ_G0016533.1 mouse_genomes_project 1 187432587 187442818 - Prrc2c protein_coding processed_transcript MGP_NODShiLtJ_T0002851.1 MGP_NODShiLtJ_G0002683.1 mouse_genomes_project 1 154682699 154700477 + Gm26642 antisense antisense MGP_NODShiLtJ_T0019570.1 MGP_NODShiLtJ_G0015874.1 mouse_genomes_project 1 58836041 58857271 + MGP_NODShiLtJ_P0019570 Nemp2 protein_coding protein_coding MGP_NODShiLtJ_T0019571.1 MGP_NODShiLtJ_G0015874.1 mouse_genomes_project 1 58836075 58857271 + MGP_NODShiLtJ_P0019571 Nemp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019572.1 MGP_NODShiLtJ_G0015874.1 mouse_genomes_project 1 58836085 58855989 + MGP_NODShiLtJ_P0019572 Nemp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019573.1 MGP_NODShiLtJ_G0015874.1 mouse_genomes_project 1 58836090 58856082 + Nemp2 protein_coding retained_intron MGP_NODShiLtJ_T0019574.1 MGP_NODShiLtJ_G0015874.1 mouse_genomes_project 1 58836135 58856055 + MGP_NODShiLtJ_P0019574 Nemp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019575.1 MGP_NODShiLtJ_G0015874.1 mouse_genomes_project 1 58846869 58857271 + Nemp2 protein_coding retained_intron MGP_NODShiLtJ_T0019576.1 MGP_NODShiLtJ_G0015874.1 mouse_genomes_project 1 58847337 58856009 + Nemp2 protein_coding processed_transcript MGP_NODShiLtJ_T0019577.1 MGP_NODShiLtJ_G0015874.1 mouse_genomes_project 1 58850533 58855380 + Nemp2 protein_coding retained_intron MGP_NODShiLtJ_T0011999.1 MGP_NODShiLtJ_G0010107.1 mouse_genomes_project 1 92038651 92039357 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023819.1 MGP_NODShiLtJ_G0016770.1 mouse_genomes_project 1 210272407 210292389 - MGP_NODShiLtJ_P0023819 Brox protein_coding protein_coding MGP_NODShiLtJ_T0023820.1 MGP_NODShiLtJ_G0016770.1 mouse_genomes_project 1 210278611 210281025 - Brox protein_coding retained_intron MGP_NODShiLtJ_T0023821.1 MGP_NODShiLtJ_G0016770.1 mouse_genomes_project 1 210280968 210287548 - Brox protein_coding retained_intron MGP_NODShiLtJ_T0023822.1 MGP_NODShiLtJ_G0016770.1 mouse_genomes_project 1 210281023 210292625 - MGP_NODShiLtJ_P0023822 Brox protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023823.1 MGP_NODShiLtJ_G0016770.1 mouse_genomes_project 1 210282583 210287115 - Brox protein_coding retained_intron MGP_NODShiLtJ_T0023824.1 MGP_NODShiLtJ_G0016770.1 mouse_genomes_project 1 210285685 210292653 - Brox protein_coding processed_transcript MGP_NODShiLtJ_T0023825.1 MGP_NODShiLtJ_G0016770.1 mouse_genomes_project 1 210286779 210290695 - MGP_NODShiLtJ_P0023825 Brox protein_coding protein_coding MGP_NODShiLtJ_T0012172.1 MGP_NODShiLtJ_G0010280.1 mouse_genomes_project 1 179024312 179024893 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000772.1 MGP_NODShiLtJ_G0000704.1 mouse_genomes_project 1 217410550 217414569 - TEC TEC MGP_NODShiLtJ_T0019540.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262386 58299110 + MGP_NODShiLtJ_P0019540 Stat1 protein_coding protein_coding MGP_NODShiLtJ_T0019541.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262401 58305563 + MGP_NODShiLtJ_P0019541 Stat1 protein_coding protein_coding MGP_NODShiLtJ_T0019542.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262436 58299110 + MGP_NODShiLtJ_P0019542 Stat1 protein_coding protein_coding MGP_NODShiLtJ_T0019543.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262438 58304705 + MGP_NODShiLtJ_P0019543 Stat1 protein_coding protein_coding MGP_NODShiLtJ_T0019544.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262444 58276238 + MGP_NODShiLtJ_P0019544 Stat1 protein_coding protein_coding MGP_NODShiLtJ_T0019545.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262495 58299029 + MGP_NODShiLtJ_P0019545 Stat1 protein_coding protein_coding MGP_NODShiLtJ_T0019546.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262505 58263341 + Stat1 protein_coding retained_intron MGP_NODShiLtJ_T0019547.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262518 58281455 + Stat1 protein_coding retained_intron MGP_NODShiLtJ_T0019548.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58262570 58304428 + MGP_NODShiLtJ_P0019548 Stat1 protein_coding protein_coding MGP_NODShiLtJ_T0019549.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58293699 58295995 + Stat1 protein_coding retained_intron MGP_NODShiLtJ_T0019550.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58293853 58305561 + MGP_NODShiLtJ_P0019550 Stat1 protein_coding protein_coding MGP_NODShiLtJ_T0019551.1 MGP_NODShiLtJ_G0015871.1 mouse_genomes_project 1 58295848 58303258 + MGP_NODShiLtJ_P0019551 Stat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005705.1 MGP_NODShiLtJ_G0004785.1 mouse_genomes_project 1 75407904 75498133 + Gm15668 lincRNA lincRNA MGP_NODShiLtJ_T0005686.1 MGP_NODShiLtJ_G0004769.1 mouse_genomes_project 1 68101150 68132298 + 2310016D23Rik lincRNA lincRNA MGP_NODShiLtJ_T0021754.1 MGP_NODShiLtJ_G0016317.1 mouse_genomes_project 1 149876507 149880174 - MGP_NODShiLtJ_P0021754 Il20 protein_coding protein_coding MGP_NODShiLtJ_T0021755.1 MGP_NODShiLtJ_G0016317.1 mouse_genomes_project 1 149876937 149879949 - MGP_NODShiLtJ_P0021755 Il20 protein_coding protein_coding MGP_NODShiLtJ_T0020242.1 MGP_NODShiLtJ_G0016002.1 mouse_genomes_project 1 82138113 82170249 + MGP_NODShiLtJ_P0020242 Igfbp2 protein_coding protein_coding MGP_NODShiLtJ_T0020243.1 MGP_NODShiLtJ_G0016002.1 mouse_genomes_project 1 82166470 82169919 + Igfbp2 protein_coding retained_intron MGP_NODShiLtJ_T0018786.1 MGP_NODShiLtJ_G0015717.1 mouse_genomes_project 1 14863606 14905705 + MGP_NODShiLtJ_P0018786 Terf1 protein_coding protein_coding MGP_NODShiLtJ_T0018787.1 MGP_NODShiLtJ_G0015717.1 mouse_genomes_project 1 14863617 14883166 + Terf1 protein_coding processed_transcript MGP_NODShiLtJ_T0018788.1 MGP_NODShiLtJ_G0015717.1 mouse_genomes_project 1 14863624 14905123 + MGP_NODShiLtJ_P0018788 Terf1 protein_coding protein_coding MGP_NODShiLtJ_T0018789.1 MGP_NODShiLtJ_G0015717.1 mouse_genomes_project 1 14872691 14883254 + Terf1 protein_coding retained_intron MGP_NODShiLtJ_T0002794.1 MGP_NODShiLtJ_G0002639.1 mouse_genomes_project 1 88030479 88044959 - Gm28410 antisense antisense MGP_NODShiLtJ_T0021989.1 MGP_NODShiLtJ_G0016370.1 mouse_genomes_project 1 153429004 153466119 + MGP_NODShiLtJ_P0021989 Chit1 protein_coding protein_coding MGP_NODShiLtJ_T0021990.1 MGP_NODShiLtJ_G0016370.1 mouse_genomes_project 1 153429004 153466119 + MGP_NODShiLtJ_P0021990 Chit1 protein_coding protein_coding MGP_NODShiLtJ_T0021991.1 MGP_NODShiLtJ_G0016370.1 mouse_genomes_project 1 153453239 153466118 + MGP_NODShiLtJ_P0021991 Chit1 protein_coding protein_coding MGP_NODShiLtJ_T0011136.1 MGP_NODShiLtJ_G0009269.1 mouse_genomes_project 1 70761630 70761806 + Gm27390 misc_RNA misc_RNA MGP_NODShiLtJ_T0009385.1 MGP_NODShiLtJ_G0007518.1 mouse_genomes_project 1 31476685 31476810 + Mir6342 miRNA miRNA MGP_NODShiLtJ_T0011955.1 MGP_NODShiLtJ_G0010063.1 mouse_genomes_project 1 71006947 71007564 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012110.1 MGP_NODShiLtJ_G0010218.1 mouse_genomes_project 1 145593165 145593878 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018783.1 MGP_NODShiLtJ_G0015715.1 mouse_genomes_project 1 13864160 13912579 - MGP_NODShiLtJ_P0018783 Trpa1 protein_coding protein_coding MGP_NODShiLtJ_T0023178.1 MGP_NODShiLtJ_G0016614.1 mouse_genomes_project 1 196676069 196680948 + MGP_NODShiLtJ_P0023178 Nr1i3 protein_coding protein_coding MGP_NODShiLtJ_T0023179.1 MGP_NODShiLtJ_G0016614.1 mouse_genomes_project 1 196676070 196680946 + MGP_NODShiLtJ_P0023179 Nr1i3 protein_coding protein_coding MGP_NODShiLtJ_T0023180.1 MGP_NODShiLtJ_G0016614.1 mouse_genomes_project 1 196676085 196682805 + MGP_NODShiLtJ_P0023180 Nr1i3 protein_coding protein_coding MGP_NODShiLtJ_T0023181.1 MGP_NODShiLtJ_G0016614.1 mouse_genomes_project 1 196676093 196681104 + Nr1i3 protein_coding retained_intron MGP_NODShiLtJ_T0023182.1 MGP_NODShiLtJ_G0016614.1 mouse_genomes_project 1 196676101 196680948 + MGP_NODShiLtJ_P0023182 Nr1i3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0023183.1 MGP_NODShiLtJ_G0016614.1 mouse_genomes_project 1 196676120 196681296 + Nr1i3 protein_coding retained_intron MGP_NODShiLtJ_T0023184.1 MGP_NODShiLtJ_G0016614.1 mouse_genomes_project 1 196676120 196680947 + MGP_NODShiLtJ_P0023184 Nr1i3 protein_coding protein_coding MGP_NODShiLtJ_T0023185.1 MGP_NODShiLtJ_G0016614.1 mouse_genomes_project 1 196676451 196680821 + Nr1i3 protein_coding retained_intron MGP_NODShiLtJ_T0016879.1 MGP_NODShiLtJ_G0014970.1 mouse_genomes_project 1 70797781 70805075 + Platr12 processed_transcript antisense MGP_NODShiLtJ_T0016880.1 MGP_NODShiLtJ_G0014970.1 mouse_genomes_project 1 70798176 70805428 + Platr12 processed_transcript lincRNA MGP_NODShiLtJ_T0000451.1 MGP_NODShiLtJ_G0000387.1 mouse_genomes_project 1 47504449 47506936 + TEC TEC MGP_NODShiLtJ_T0021621.1 MGP_NODShiLtJ_G0016289.1 mouse_genomes_project 1 144308218 144352902 - MGP_NODShiLtJ_P0021621 Lypd1 protein_coding protein_coding MGP_NODShiLtJ_T0021622.1 MGP_NODShiLtJ_G0016289.1 mouse_genomes_project 1 144312884 144352075 - MGP_NODShiLtJ_P0021622 Lypd1 protein_coding protein_coding MGP_NODShiLtJ_T0021623.1 MGP_NODShiLtJ_G0016289.1 mouse_genomes_project 1 144312918 144353653 - MGP_NODShiLtJ_P0021623 Lypd1 protein_coding protein_coding MGP_NODShiLtJ_T0021624.1 MGP_NODShiLtJ_G0016289.1 mouse_genomes_project 1 144313701 144351598 - MGP_NODShiLtJ_P0021624 Lypd1 protein_coding protein_coding MGP_NODShiLtJ_T0021625.1 MGP_NODShiLtJ_G0016289.1 mouse_genomes_project 1 144314119 144353826 - MGP_NODShiLtJ_P0021625 Lypd1 protein_coding protein_coding MGP_NODShiLtJ_T0009419.1 MGP_NODShiLtJ_G0007552.1 mouse_genomes_project 1 94713115 94713228 - Mir6353 miRNA miRNA MGP_NODShiLtJ_T0022496.1 MGP_NODShiLtJ_G0016473.1 mouse_genomes_project 1 177495895 177540721 - MGP_NODShiLtJ_P0022496 Rgsl1 protein_coding protein_coding MGP_NODShiLtJ_T0022497.1 MGP_NODShiLtJ_G0016473.1 mouse_genomes_project 1 177495897 177582976 - MGP_NODShiLtJ_P0022497 Rgsl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022498.1 MGP_NODShiLtJ_G0016473.1 mouse_genomes_project 1 177495900 177582096 - MGP_NODShiLtJ_P0022498 Rgsl1 protein_coding protein_coding MGP_NODShiLtJ_T0022499.1 MGP_NODShiLtJ_G0016473.1 mouse_genomes_project 1 177495906 177562188 - MGP_NODShiLtJ_P0022499 Rgsl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022500.1 MGP_NODShiLtJ_G0016473.1 mouse_genomes_project 1 177498206 177520766 - Rgsl1 protein_coding processed_transcript MGP_NODShiLtJ_T0022501.1 MGP_NODShiLtJ_G0016473.1 mouse_genomes_project 1 177514334 177582088 - MGP_NODShiLtJ_P0022501 Rgsl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022502.1 MGP_NODShiLtJ_G0016473.1 mouse_genomes_project 1 177522616 177553847 - Rgsl1 protein_coding retained_intron MGP_NODShiLtJ_T0022503.1 MGP_NODShiLtJ_G0016473.1 mouse_genomes_project 1 177530440 177546395 - Rgsl1 protein_coding processed_transcript MGP_NODShiLtJ_T0005940.1 MGP_NODShiLtJ_G0004974.1 mouse_genomes_project 1 206999780 207010881 - Gm37336 lincRNA lincRNA MGP_NODShiLtJ_T0005941.1 MGP_NODShiLtJ_G0004974.1 mouse_genomes_project 1 207010478 207010946 - Gm37336 lincRNA lincRNA MGP_NODShiLtJ_T0098561.1 MGP_NODShiLtJ_G0036955.1 mouse_genomes_project 1 150055026 150055120 - Gm25549 snRNA snRNA MGP_NODShiLtJ_T0018739.1 MGP_NODShiLtJ_G0015706.1 mouse_genomes_project 1 11463887 11634038 + MGP_NODShiLtJ_P0018739 Sulf1 protein_coding protein_coding MGP_NODShiLtJ_T0018740.1 MGP_NODShiLtJ_G0015706.1 mouse_genomes_project 1 11494220 11603931 + Sulf1 protein_coding retained_intron MGP_NODShiLtJ_T0018741.1 MGP_NODShiLtJ_G0015706.1 mouse_genomes_project 1 11494273 11644180 + MGP_NODShiLtJ_P0018741 Sulf1 protein_coding protein_coding MGP_NODShiLtJ_T0018742.1 MGP_NODShiLtJ_G0015706.1 mouse_genomes_project 1 11495342 11564717 + MGP_NODShiLtJ_P0018742 Sulf1 protein_coding protein_coding MGP_NODShiLtJ_T0018743.1 MGP_NODShiLtJ_G0015706.1 mouse_genomes_project 1 11503923 11564807 + MGP_NODShiLtJ_P0018743 Sulf1 protein_coding protein_coding MGP_NODShiLtJ_T0018744.1 MGP_NODShiLtJ_G0015706.1 mouse_genomes_project 1 11563610 11566986 + Sulf1 protein_coding retained_intron MGP_NODShiLtJ_T0018745.1 MGP_NODShiLtJ_G0015706.1 mouse_genomes_project 1 11617812 11622282 + Sulf1 protein_coding retained_intron MGP_NODShiLtJ_T0018746.1 MGP_NODShiLtJ_G0015706.1 mouse_genomes_project 1 11624377 11644174 + MGP_NODShiLtJ_P0018746 Sulf1 protein_coding protein_coding MGP_NODShiLtJ_T0020865.1 MGP_NODShiLtJ_G0016117.1 mouse_genomes_project 1 97077039 97080439 - MGP_NODShiLtJ_P0020865 Nmur1 protein_coding protein_coding MGP_NODShiLtJ_T0099747.1 MGP_NODShiLtJ_G0038141.1 mouse_genomes_project 1 33759143 33759270 - Gm26145 snoRNA snoRNA MGP_NODShiLtJ_T0021035.1 MGP_NODShiLtJ_G0016158.1 mouse_genomes_project 1 100359073 100438499 + MGP_NODShiLtJ_P0021035 Sh3bp4 protein_coding protein_coding MGP_NODShiLtJ_T0021036.1 MGP_NODShiLtJ_G0016158.1 mouse_genomes_project 1 100359111 100396231 + Sh3bp4 protein_coding processed_transcript MGP_NODShiLtJ_T0011907.1 MGP_NODShiLtJ_G0010015.1 mouse_genomes_project 1 58065558 58065974 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098530.1 MGP_NODShiLtJ_G0036924.1 mouse_genomes_project 1 72763200 72763356 - Gm24788 snRNA snRNA MGP_NODShiLtJ_T0016893.1 MGP_NODShiLtJ_G0014977.1 mouse_genomes_project 1 100961872 100995237 - 4933400F21Rik processed_transcript antisense MGP_NODShiLtJ_T0016894.1 MGP_NODShiLtJ_G0014977.1 mouse_genomes_project 1 100988833 100995223 - 4933400F21Rik processed_transcript antisense MGP_NODShiLtJ_T0016895.1 MGP_NODShiLtJ_G0014977.1 mouse_genomes_project 1 100992431 100995217 - 4933400F21Rik processed_transcript retained_intron MGP_NODShiLtJ_T0020671.1 MGP_NODShiLtJ_G0016076.1 mouse_genomes_project 1 90168447 90271264 - MGP_NODShiLtJ_P0020671 Cul3 protein_coding protein_coding MGP_NODShiLtJ_T0020672.1 MGP_NODShiLtJ_G0016076.1 mouse_genomes_project 1 90170346 90269510 - MGP_NODShiLtJ_P0020672 Cul3 protein_coding protein_coding MGP_NODShiLtJ_T0020673.1 MGP_NODShiLtJ_G0016076.1 mouse_genomes_project 1 90170470 90180980 - MGP_NODShiLtJ_P0020673 Cul3 protein_coding protein_coding MGP_NODShiLtJ_T0020674.1 MGP_NODShiLtJ_G0016076.1 mouse_genomes_project 1 90170765 90180104 - Cul3 protein_coding retained_intron MGP_NODShiLtJ_T0020675.1 MGP_NODShiLtJ_G0016076.1 mouse_genomes_project 1 90192310 90269506 - MGP_NODShiLtJ_P0020675 Cul3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020676.1 MGP_NODShiLtJ_G0016076.1 mouse_genomes_project 1 90193937 90269478 - MGP_NODShiLtJ_P0020676 Cul3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019706.1 MGP_NODShiLtJ_G0015902.1 mouse_genomes_project 1 63514971 63516363 - MGP_NODShiLtJ_P0019706 Hsfy2 protein_coding protein_coding MGP_NODShiLtJ_T0019904.1 MGP_NODShiLtJ_G0015936.1 mouse_genomes_project 1 67137171 67212927 + MGP_NODShiLtJ_P0019904 Fam117b protein_coding protein_coding MGP_NODShiLtJ_T0019905.1 MGP_NODShiLtJ_G0015936.1 mouse_genomes_project 1 67198177 67209084 + MGP_NODShiLtJ_P0019905 Fam117b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019906.1 MGP_NODShiLtJ_G0015936.1 mouse_genomes_project 1 67206748 67208507 + Fam117b protein_coding retained_intron MGP_NODShiLtJ_T0009397.1 MGP_NODShiLtJ_G0007530.1 mouse_genomes_project 1 52366545 52366650 - Mir6350 miRNA miRNA MGP_NODShiLtJ_T0098171.1 MGP_NODShiLtJ_G0036583.1 mouse_genomes_project 1 145895354 145895483 + Gm23370 scaRNA scaRNA MGP_NODShiLtJ_T0098552.1 MGP_NODShiLtJ_G0036946.1 mouse_genomes_project 1 134950587 134950751 + Gm24030 snRNA snRNA MGP_NODShiLtJ_T0021205.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104416658 104426717 + MGP_NODShiLtJ_P0021205 Rnpepl1 protein_coding protein_coding MGP_NODShiLtJ_T0021206.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104416700 104426448 + Rnpepl1 protein_coding retained_intron MGP_NODShiLtJ_T0021207.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104416728 104419289 + Rnpepl1 protein_coding retained_intron MGP_NODShiLtJ_T0021208.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104416996 104422613 + MGP_NODShiLtJ_P0021208 Rnpepl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021209.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104417084 104421809 + MGP_NODShiLtJ_P0021209 Rnpepl1 protein_coding protein_coding MGP_NODShiLtJ_T0021210.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104421719 104426448 + Rnpepl1 protein_coding retained_intron MGP_NODShiLtJ_T0021211.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104422666 104426448 + MGP_NODShiLtJ_P0021211 Rnpepl1 protein_coding protein_coding MGP_NODShiLtJ_T0021212.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104422680 104425092 + Rnpepl1 protein_coding retained_intron MGP_NODShiLtJ_T0021213.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104422887 104423949 + Rnpepl1 protein_coding retained_intron MGP_NODShiLtJ_T0021214.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104423022 104424941 + MGP_NODShiLtJ_P0021214 Rnpepl1 protein_coding protein_coding MGP_NODShiLtJ_T0021215.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104423291 104425093 + Rnpepl1 protein_coding retained_intron MGP_NODShiLtJ_T0021216.1 MGP_NODShiLtJ_G0016198.1 mouse_genomes_project 1 104425489 104430260 + MGP_NODShiLtJ_P0021216 Rnpepl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0101476.1 MGP_NODShiLtJ_G0039646.1 mouse_genomes_project 1 84937887 84938064 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002739.1 MGP_NODShiLtJ_G0002600.1 mouse_genomes_project 1 41783060 41787089 + Gm16151 antisense antisense MGP_NODShiLtJ_T0018855.1 MGP_NODShiLtJ_G0015732.1 mouse_genomes_project 1 17719126 17720230 - MGP_NODShiLtJ_P0018855 Defb18 protein_coding protein_coding MGP_NODShiLtJ_T0098223.1 MGP_NODShiLtJ_G0036635.1 mouse_genomes_project 1 58911096 58915545 - sense_intronic sense_intronic MGP_NODShiLtJ_T0012106.1 MGP_NODShiLtJ_G0010214.1 mouse_genomes_project 1 141946292 141947485 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101515.1 MGP_NODShiLtJ_G0039685.1 mouse_genomes_project 1 200138914 200139857 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005883.1 MGP_NODShiLtJ_G0004928.1 mouse_genomes_project 1 177808786 177815725 - Gm28286 lincRNA lincRNA MGP_NODShiLtJ_T0022230.1 MGP_NODShiLtJ_G0016418.1 mouse_genomes_project 1 158052720 158068444 + MGP_NODShiLtJ_P0022230 Atp6v1g3 protein_coding protein_coding MGP_NODShiLtJ_T0005639.1 MGP_NODShiLtJ_G0004740.1 mouse_genomes_project 1 46124228 46124691 - Gm29664 lincRNA lincRNA MGP_NODShiLtJ_T0000478.1 MGP_NODShiLtJ_G0000414.1 mouse_genomes_project 1 68365981 68368473 + TEC TEC MGP_NODShiLtJ_T0021461.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125590583 125603735 + MGP_NODShiLtJ_P0021461 Cdh7 protein_coding protein_coding MGP_NODShiLtJ_T0021462.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125590862 125812626 + MGP_NODShiLtJ_P0021462 Cdh7 protein_coding protein_coding MGP_NODShiLtJ_T0021463.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125591133 125603278 + MGP_NODShiLtJ_P0021463 Cdh7 protein_coding protein_coding MGP_NODShiLtJ_T0021464.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125591158 125602337 + MGP_NODShiLtJ_P0021464 Cdh7 protein_coding protein_coding MGP_NODShiLtJ_T0021465.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125591381 125811668 + MGP_NODShiLtJ_P0021465 Cdh7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0021466.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125591433 125608934 + MGP_NODShiLtJ_P0021466 Cdh7 protein_coding protein_coding MGP_NODShiLtJ_T0021467.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125591889 125811474 + MGP_NODShiLtJ_P0021467 Cdh7 protein_coding protein_coding MGP_NODShiLtJ_T0021468.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125601936 125811662 + MGP_NODShiLtJ_P0021468 Cdh7 protein_coding protein_coding MGP_NODShiLtJ_T0021469.1 MGP_NODShiLtJ_G0016257.1 mouse_genomes_project 1 125761766 125810531 + MGP_NODShiLtJ_P0021469 Cdh7 protein_coding protein_coding MGP_NODShiLtJ_T0021970.1 MGP_NODShiLtJ_G0016364.1 mouse_genomes_project 1 152954626 152967222 - MGP_NODShiLtJ_P0021970 Lax1 protein_coding protein_coding MGP_NODShiLtJ_T0021971.1 MGP_NODShiLtJ_G0016364.1 mouse_genomes_project 1 152955996 152967200 - MGP_NODShiLtJ_P0021971 Lax1 protein_coding protein_coding MGP_NODShiLtJ_T0019117.1 MGP_NODShiLtJ_G0015788.1 mouse_genomes_project 1 39672020 39722520 + MGP_NODShiLtJ_P0019117 Fer1l5 protein_coding protein_coding MGP_NODShiLtJ_T0019118.1 MGP_NODShiLtJ_G0015788.1 mouse_genomes_project 1 39685181 39704297 + MGP_NODShiLtJ_P0019118 Fer1l5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019119.1 MGP_NODShiLtJ_G0015788.1 mouse_genomes_project 1 39717300 39722523 + MGP_NODShiLtJ_P0019119 Fer1l5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000463.1 MGP_NODShiLtJ_G0000399.1 mouse_genomes_project 1 61588583 61591339 - TEC TEC MGP_NODShiLtJ_T0099736.1 MGP_NODShiLtJ_G0038130.1 mouse_genomes_project 1 14045723 14045843 - Gm26345 snoRNA snoRNA MGP_NODShiLtJ_T0019326.1 MGP_NODShiLtJ_G0015828.1 mouse_genomes_project 1 43370762 43371940 - MGP_NODShiLtJ_P0019326 Gm3646 protein_coding protein_coding MGP_NODShiLtJ_T0005789.1 MGP_NODShiLtJ_G0004853.1 mouse_genomes_project 1 109129184 109209612 - lincRNA lincRNA MGP_NODShiLtJ_T0011734.1 MGP_NODShiLtJ_G0009842.1 mouse_genomes_project 1 1917872 1918322 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012034.1 MGP_NODShiLtJ_G0010142.1 mouse_genomes_project 1 111723778 111724492 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021391.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 119995248 120176064 - MGP_NODShiLtJ_P0021391 Pign protein_coding protein_coding MGP_NODShiLtJ_T0021392.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 119995252 120181829 - MGP_NODShiLtJ_P0021392 Pign protein_coding protein_coding MGP_NODShiLtJ_T0021393.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 119997972 120064684 - Pign protein_coding processed_transcript MGP_NODShiLtJ_T0021394.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 120040825 120181810 - MGP_NODShiLtJ_P0021394 Pign protein_coding protein_coding MGP_NODShiLtJ_T0021395.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 120045001 120181829 - MGP_NODShiLtJ_P0021395 Pign protein_coding protein_coding MGP_NODShiLtJ_T0021396.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 120163831 120181844 - Pign protein_coding retained_intron MGP_NODShiLtJ_T0021397.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 120163831 120181843 - Pign protein_coding retained_intron MGP_NODShiLtJ_T0021398.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 120163985 120166743 - Pign protein_coding retained_intron MGP_NODShiLtJ_T0021399.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 120175314 120181840 - Pign protein_coding retained_intron MGP_NODShiLtJ_T0021400.1 MGP_NODShiLtJ_G0016238.1 mouse_genomes_project 1 120176233 120181839 - Pign protein_coding retained_intron MGP_NODShiLtJ_T0011929.1 MGP_NODShiLtJ_G0010037.1 mouse_genomes_project 1 65649437 65798111 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099762.1 MGP_NODShiLtJ_G0038156.1 mouse_genomes_project 1 66875775 66875859 + Gm26293 snoRNA snoRNA MGP_NODShiLtJ_T0012116.1 MGP_NODShiLtJ_G0010224.1 mouse_genomes_project 1 149069167 149069576 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002823.1 MGP_NODShiLtJ_G0002663.1 mouse_genomes_project 1 135939345 135939961 - 2900060B14Rik antisense antisense MGP_NODShiLtJ_T0002824.1 MGP_NODShiLtJ_G0002663.1 mouse_genomes_project 1 135939363 135939441 - 2900060B14Rik antisense antisense MGP_NODShiLtJ_T0012238.1 MGP_NODShiLtJ_G0010346.1 mouse_genomes_project 1 210927682 210927829 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0023099.1 MGP_NODShiLtJ_G0016591.1 mouse_genomes_project 1 195218604 195224468 + MGP_NODShiLtJ_P0023099 Ccdc190 protein_coding protein_coding MGP_NODShiLtJ_T0023100.1 MGP_NODShiLtJ_G0016591.1 mouse_genomes_project 1 195219885 195224228 + MGP_NODShiLtJ_P0023100 Ccdc190 protein_coding protein_coding MGP_NODShiLtJ_T0005802.1 MGP_NODShiLtJ_G0004863.1 mouse_genomes_project 1 122102137 122104350 - Gm15391 lincRNA lincRNA MGP_NODShiLtJ_T0000739.1 MGP_NODShiLtJ_G0000673.1 mouse_genomes_project 1 204826007 204826601 - TEC TEC MGP_NODShiLtJ_T0000740.1 MGP_NODShiLtJ_G0000673.1 mouse_genomes_project 1 204826053 204826599 - TEC pseudogene MGP_NODShiLtJ_T0021178.1 MGP_NODShiLtJ_G0016187.1 mouse_genomes_project 1 103970318 103976182 - MGP_NODShiLtJ_P0021178 Olfr1415 protein_coding protein_coding MGP_NODShiLtJ_T0021179.1 MGP_NODShiLtJ_G0016187.1 mouse_genomes_project 1 103970366 103971834 - MGP_NODShiLtJ_P0021179 Olfr1415 protein_coding protein_coding MGP_NODShiLtJ_T0021180.1 MGP_NODShiLtJ_G0016187.1 mouse_genomes_project 1 103970922 103976159 - MGP_NODShiLtJ_P0021180 Olfr1415 protein_coding protein_coding MGP_NODShiLtJ_T0024087.1 MGP_NODShiLtJ_G0016824.1 mouse_genomes_project 1 220534281 220545558 - MGP_NODShiLtJ_P0024087 protein_coding protein_coding MGP_NODShiLtJ_T0024088.1 MGP_NODShiLtJ_G0016824.1 mouse_genomes_project 1 220534282 220541549 - MGP_NODShiLtJ_P0024088 protein_coding protein_coding MGP_NODShiLtJ_T0024089.1 MGP_NODShiLtJ_G0016824.1 mouse_genomes_project 1 220536856 220541549 - MGP_NODShiLtJ_P0024089 protein_coding protein_coding MGP_NODShiLtJ_T0024090.1 MGP_NODShiLtJ_G0016824.1 mouse_genomes_project 1 220544003 220545288 - protein_coding processed_transcript MGP_NODShiLtJ_T0000547.1 MGP_NODShiLtJ_G0000483.1 mouse_genomes_project 1 99917309 99919050 + TEC TEC MGP_NODShiLtJ_T0022039.1 MGP_NODShiLtJ_G0016381.1 mouse_genomes_project 1 153847738 153865138 + MGP_NODShiLtJ_P0022039 Rabif protein_coding protein_coding MGP_NODShiLtJ_T0000726.1 MGP_NODShiLtJ_G0000660.1 mouse_genomes_project 1 201553047 201554857 - TEC TEC MGP_NODShiLtJ_T0019912.1 MGP_NODShiLtJ_G0015938.1 mouse_genomes_project 1 67305544 67336174 - MGP_NODShiLtJ_P0019912 Wdr12 protein_coding protein_coding MGP_NODShiLtJ_T0019913.1 MGP_NODShiLtJ_G0015938.1 mouse_genomes_project 1 67314148 67336911 - MGP_NODShiLtJ_P0019913 Wdr12 protein_coding protein_coding MGP_NODShiLtJ_T0019914.1 MGP_NODShiLtJ_G0015938.1 mouse_genomes_project 1 67314148 67336412 - MGP_NODShiLtJ_P0019914 Wdr12 protein_coding protein_coding MGP_NODShiLtJ_T0019915.1 MGP_NODShiLtJ_G0015938.1 mouse_genomes_project 1 67320317 67322992 - Wdr12 protein_coding retained_intron MGP_NODShiLtJ_T0019916.1 MGP_NODShiLtJ_G0015938.1 mouse_genomes_project 1 67321027 67323169 - Wdr12 protein_coding processed_transcript MGP_NODShiLtJ_T0019917.1 MGP_NODShiLtJ_G0015938.1 mouse_genomes_project 1 67325268 67336401 - MGP_NODShiLtJ_P0019917 Wdr12 protein_coding protein_coding MGP_NODShiLtJ_T0019918.1 MGP_NODShiLtJ_G0015938.1 mouse_genomes_project 1 67325268 67336391 - MGP_NODShiLtJ_P0019918 Wdr12 protein_coding protein_coding MGP_NODShiLtJ_T0019919.1 MGP_NODShiLtJ_G0015938.1 mouse_genomes_project 1 67331245 67335963 - Wdr12 protein_coding retained_intron MGP_NODShiLtJ_T0005718.1 MGP_NODShiLtJ_G0004794.1 mouse_genomes_project 1 81361999 81377412 - Gm4319 lincRNA lincRNA MGP_NODShiLtJ_T0002760.1 MGP_NODShiLtJ_G0002617.1 mouse_genomes_project 1 64872458 64879735 - Gm17234 antisense antisense MGP_NODShiLtJ_T0005627.1 MGP_NODShiLtJ_G0004732.1 mouse_genomes_project 1 40062468 40068507 - Gm33533 lincRNA lincRNA MGP_NODShiLtJ_T0005688.1 MGP_NODShiLtJ_G0004771.1 mouse_genomes_project 1 68710147 68715986 + Gm11587 lincRNA lincRNA MGP_NODShiLtJ_T0011822.1 MGP_NODShiLtJ_G0009930.1 mouse_genomes_project 1 30547126 30549611 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021986.1 MGP_NODShiLtJ_G0016368.1 mouse_genomes_project 1 153343332 153355518 + MGP_NODShiLtJ_P0021986 Fmod protein_coding protein_coding MGP_NODShiLtJ_T0021987.1 MGP_NODShiLtJ_G0016368.1 mouse_genomes_project 1 153343574 153346554 + MGP_NODShiLtJ_P0021987 Fmod protein_coding protein_coding MGP_NODShiLtJ_T0018858.1 MGP_NODShiLtJ_G0015734.1 mouse_genomes_project 1 18924133 18959235 + MGP_NODShiLtJ_P0018858 Tfap2b protein_coding protein_coding MGP_NODShiLtJ_T0018859.1 MGP_NODShiLtJ_G0015734.1 mouse_genomes_project 1 18924183 18958742 + MGP_NODShiLtJ_P0018859 Tfap2b protein_coding protein_coding MGP_NODShiLtJ_T0018860.1 MGP_NODShiLtJ_G0015734.1 mouse_genomes_project 1 18927245 18955287 + MGP_NODShiLtJ_P0018860 Tfap2b protein_coding protein_coding MGP_NODShiLtJ_T0018861.1 MGP_NODShiLtJ_G0015734.1 mouse_genomes_project 1 18927494 18929583 + Tfap2b protein_coding retained_intron MGP_NODShiLtJ_T0018862.1 MGP_NODShiLtJ_G0015734.1 mouse_genomes_project 1 18929019 18934373 + Tfap2b protein_coding retained_intron MGP_NODShiLtJ_T0000558.1 MGP_NODShiLtJ_G0000494.1 mouse_genomes_project 1 107350809 107353845 + TEC TEC MGP_NODShiLtJ_T0011872.1 MGP_NODShiLtJ_G0009980.1 mouse_genomes_project 1 48281834 48284124 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005752.1 MGP_NODShiLtJ_G0004818.1 mouse_genomes_project 1 93396590 93397568 - Krtap28-10 lincRNA lincRNA MGP_NODShiLtJ_T0021018.1 MGP_NODShiLtJ_G0016152.1 mouse_genomes_project 1 99460139 99461830 + MGP_NODShiLtJ_P0021018 protein_coding protein_coding MGP_NODShiLtJ_T0023735.1 MGP_NODShiLtJ_G0016752.1 mouse_genomes_project 1 208039278 208058006 + MGP_NODShiLtJ_P0023735 Cnih4 protein_coding protein_coding MGP_NODShiLtJ_T0023736.1 MGP_NODShiLtJ_G0016752.1 mouse_genomes_project 1 208039280 208058006 + MGP_NODShiLtJ_P0023736 Cnih4 protein_coding protein_coding MGP_NODShiLtJ_T0023737.1 MGP_NODShiLtJ_G0016752.1 mouse_genomes_project 1 208043079 208055393 + Cnih4 protein_coding processed_transcript MGP_NODShiLtJ_T0023738.1 MGP_NODShiLtJ_G0016752.1 mouse_genomes_project 1 208044061 208055361 + Cnih4 protein_coding retained_intron MGP_NODShiLtJ_T0022013.1 MGP_NODShiLtJ_G0016376.1 mouse_genomes_project 1 153681771 153699717 - MGP_NODShiLtJ_P0022013 Tmem183a protein_coding protein_coding MGP_NODShiLtJ_T0022014.1 MGP_NODShiLtJ_G0016376.1 mouse_genomes_project 1 153683356 153699679 - MGP_NODShiLtJ_P0022014 Tmem183a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022015.1 MGP_NODShiLtJ_G0016376.1 mouse_genomes_project 1 153683584 153685706 - Tmem183a protein_coding retained_intron MGP_NODShiLtJ_T0022016.1 MGP_NODShiLtJ_G0016376.1 mouse_genomes_project 1 153690842 153699691 - Tmem183a protein_coding retained_intron MGP_NODShiLtJ_T0022017.1 MGP_NODShiLtJ_G0016376.1 mouse_genomes_project 1 153691108 153699428 - MGP_NODShiLtJ_P0022017 Tmem183a protein_coding protein_coding MGP_NODShiLtJ_T0012150.1 MGP_NODShiLtJ_G0010258.1 mouse_genomes_project 1 170566987 170568686 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098568.1 MGP_NODShiLtJ_G0036962.1 mouse_genomes_project 1 161731175 161731282 + Gm25457 snRNA snRNA MGP_NODShiLtJ_T0019371.1 MGP_NODShiLtJ_G0015836.1 mouse_genomes_project 1 44212798 44269537 + MGP_NODShiLtJ_P0019371 Slc9a4 protein_coding protein_coding MGP_NODShiLtJ_T0019372.1 MGP_NODShiLtJ_G0015836.1 mouse_genomes_project 1 44212921 44218140 + Slc9a4 protein_coding processed_transcript MGP_NODShiLtJ_T0019373.1 MGP_NODShiLtJ_G0015836.1 mouse_genomes_project 1 44235673 44238040 + Slc9a4 protein_coding processed_transcript MGP_NODShiLtJ_T0019374.1 MGP_NODShiLtJ_G0015836.1 mouse_genomes_project 1 44267779 44269228 + Slc9a4 protein_coding retained_intron MGP_NODShiLtJ_T0018652.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8203680 8318552 + MGP_NODShiLtJ_P0018652 Sgk3 protein_coding protein_coding MGP_NODShiLtJ_T0018653.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8203716 8318554 + MGP_NODShiLtJ_P0018653 Sgk3 protein_coding protein_coding MGP_NODShiLtJ_T0018654.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8203716 8318479 + MGP_NODShiLtJ_P0018654 Sgk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018655.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8203731 8240238 + Sgk3 protein_coding retained_intron MGP_NODShiLtJ_T0018656.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8203758 8317327 + MGP_NODShiLtJ_P0018656 Sgk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018657.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8203781 8317717 + MGP_NODShiLtJ_P0018657 Sgk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018658.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8261691 8318552 + MGP_NODShiLtJ_P0018658 Sgk3 protein_coding protein_coding MGP_NODShiLtJ_T0018659.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8261740 8279734 + Sgk3 protein_coding processed_transcript MGP_NODShiLtJ_T0018660.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8261740 8286645 + Sgk3 protein_coding retained_intron MGP_NODShiLtJ_T0018661.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8261816 8317562 + MGP_NODShiLtJ_P0018661 Sgk3 protein_coding protein_coding MGP_NODShiLtJ_T0018662.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8299619 8305365 + Sgk3 protein_coding retained_intron MGP_NODShiLtJ_T0018663.1 MGP_NODShiLtJ_G0015696.1 mouse_genomes_project 1 8313147 8316896 + Sgk3 protein_coding retained_intron MGP_NODShiLtJ_T0023121.1 MGP_NODShiLtJ_G0016597.1 mouse_genomes_project 1 195606254 195618082 + MGP_NODShiLtJ_P0023121 Sh2d1b1 protein_coding protein_coding MGP_NODShiLtJ_T0020386.1 MGP_NODShiLtJ_G0016027.1 mouse_genomes_project 1 84212687 84223395 - MGP_NODShiLtJ_P0020386 Prkag3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020387.1 MGP_NODShiLtJ_G0016027.1 mouse_genomes_project 1 84213974 84223661 - MGP_NODShiLtJ_P0020387 Prkag3 protein_coding protein_coding MGP_NODShiLtJ_T0020388.1 MGP_NODShiLtJ_G0016027.1 mouse_genomes_project 1 84213974 84223017 - MGP_NODShiLtJ_P0020388 Prkag3 protein_coding protein_coding MGP_NODShiLtJ_T0020389.1 MGP_NODShiLtJ_G0016027.1 mouse_genomes_project 1 84215236 84223307 - MGP_NODShiLtJ_P0020389 Prkag3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020390.1 MGP_NODShiLtJ_G0016027.1 mouse_genomes_project 1 84221957 84223344 - MGP_NODShiLtJ_P0020390 Prkag3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020780.1 MGP_NODShiLtJ_G0016095.1 mouse_genomes_project 1 95398293 95467606 + MGP_NODShiLtJ_P0020780 Fbxo36 protein_coding protein_coding MGP_NODShiLtJ_T0020781.1 MGP_NODShiLtJ_G0016095.1 mouse_genomes_project 1 95398305 95467606 + Fbxo36 protein_coding processed_transcript MGP_NODShiLtJ_T0020782.1 MGP_NODShiLtJ_G0016095.1 mouse_genomes_project 1 95430130 95467606 + Fbxo36 protein_coding processed_transcript MGP_NODShiLtJ_T0020783.1 MGP_NODShiLtJ_G0016095.1 mouse_genomes_project 1 95432874 95467606 + Fbxo36 protein_coding processed_transcript MGP_NODShiLtJ_T0101020.1 MGP_NODShiLtJ_G0039402.1 mouse_genomes_project 1 207131614 207135574 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101021.1 MGP_NODShiLtJ_G0039402.1 mouse_genomes_project 1 207131818 207132849 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0023856.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211903841 211936600 - MGP_NODShiLtJ_P0023856 Marc2 protein_coding protein_coding MGP_NODShiLtJ_T0023857.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211904451 211918206 - Marc2 protein_coding processed_transcript MGP_NODShiLtJ_T0023858.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211904455 211913799 - Marc2 protein_coding retained_intron MGP_NODShiLtJ_T0023859.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211904465 211917991 - Marc2 protein_coding processed_transcript MGP_NODShiLtJ_T0023860.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211904467 211910217 - Marc2 protein_coding retained_intron MGP_NODShiLtJ_T0023861.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211904533 211917981 - Marc2 protein_coding processed_transcript MGP_NODShiLtJ_T0023862.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211910009 211936527 - Marc2 protein_coding processed_transcript MGP_NODShiLtJ_T0023863.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211913148 211937170 - MGP_NODShiLtJ_P0023863 Marc2 protein_coding protein_coding MGP_NODShiLtJ_T0023864.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211918508 211936290 - Marc2 protein_coding processed_transcript MGP_NODShiLtJ_T0023865.1 MGP_NODShiLtJ_G0016779.1 mouse_genomes_project 1 211919663 211936566 - Marc2 protein_coding retained_intron MGP_NODShiLtJ_T0020599.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85000219 85016133 + MGP_NODShiLtJ_P0020599 Slc4a3 protein_coding protein_coding MGP_NODShiLtJ_T0020600.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85000282 85001494 + Slc4a3 protein_coding retained_intron MGP_NODShiLtJ_T0020601.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85000448 85002025 + MGP_NODShiLtJ_P0020601 Slc4a3 protein_coding protein_coding MGP_NODShiLtJ_T0020602.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85000482 85012859 + MGP_NODShiLtJ_P0020602 Slc4a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020603.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85000513 85001731 + Slc4a3 protein_coding retained_intron MGP_NODShiLtJ_T0020604.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85000519 85001998 + MGP_NODShiLtJ_P0020604 Slc4a3 protein_coding protein_coding MGP_NODShiLtJ_T0020605.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85000630 85014850 + Slc4a3 protein_coding retained_intron MGP_NODShiLtJ_T0020606.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85000642 85001521 + Slc4a3 protein_coding retained_intron MGP_NODShiLtJ_T0020607.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85003585 85005369 + MGP_NODShiLtJ_P0020607 Slc4a3 protein_coding protein_coding MGP_NODShiLtJ_T0020608.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85003754 85005116 + Slc4a3 protein_coding retained_intron MGP_NODShiLtJ_T0020609.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85004581 85009114 + MGP_NODShiLtJ_P0020609 Slc4a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0020610.1 MGP_NODShiLtJ_G0016060.1 mouse_genomes_project 1 85005695 85007719 + MGP_NODShiLtJ_P0020610 Slc4a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000642.1 MGP_NODShiLtJ_G0000576.1 mouse_genomes_project 1 158345697 158348101 - TEC TEC MGP_NODShiLtJ_T0019839.1 MGP_NODShiLtJ_G0015925.1 mouse_genomes_project 1 66100346 66108857 + Stradb protein_coding retained_intron MGP_NODShiLtJ_T0019840.1 MGP_NODShiLtJ_G0015925.1 mouse_genomes_project 1 66100346 66115223 + Stradb protein_coding retained_intron MGP_NODShiLtJ_T0019841.1 MGP_NODShiLtJ_G0015925.1 mouse_genomes_project 1 66100346 66118937 + MGP_NODShiLtJ_P0019841 Stradb protein_coding protein_coding MGP_NODShiLtJ_T0019842.1 MGP_NODShiLtJ_G0015925.1 mouse_genomes_project 1 66100346 66123167 + MGP_NODShiLtJ_P0019842 Stradb protein_coding protein_coding MGP_NODShiLtJ_T0019843.1 MGP_NODShiLtJ_G0015925.1 mouse_genomes_project 1 66100346 66122574 + MGP_NODShiLtJ_P0019843 Stradb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019844.1 MGP_NODShiLtJ_G0015925.1 mouse_genomes_project 1 66100346 66122449 + MGP_NODShiLtJ_P0019844 Stradb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0019845.1 MGP_NODShiLtJ_G0015925.1 mouse_genomes_project 1 66118406 66121811 + MGP_NODShiLtJ_P0019845 Stradb protein_coding protein_coding MGP_NODShiLtJ_T0000467.1 MGP_NODShiLtJ_G0000403.1 mouse_genomes_project 1 63869327 63871165 + TEC TEC MGP_NODShiLtJ_T0011143.1 MGP_NODShiLtJ_G0009276.1 mouse_genomes_project 1 118875614 118875944 + Gm23537 misc_RNA misc_RNA MGP_NODShiLtJ_T0011910.1 MGP_NODShiLtJ_G0010018.1 mouse_genomes_project 1 58701886 58702882 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0021025.1 MGP_NODShiLtJ_G0016154.1 mouse_genomes_project 1 99482915 99534006 + Trpm8 protein_coding processed_transcript MGP_NODShiLtJ_T0021026.1 MGP_NODShiLtJ_G0016154.1 mouse_genomes_project 1 99521592 99622765 + MGP_NODShiLtJ_P0021026 Trpm8 protein_coding protein_coding MGP_NODShiLtJ_T0021027.1 MGP_NODShiLtJ_G0016154.1 mouse_genomes_project 1 99525272 99623207 + MGP_NODShiLtJ_P0021027 Trpm8 protein_coding protein_coding MGP_NODShiLtJ_T0021028.1 MGP_NODShiLtJ_G0016154.1 mouse_genomes_project 1 99547994 99622765 + MGP_NODShiLtJ_P0021028 Trpm8 protein_coding protein_coding MGP_NODShiLtJ_T0000698.1 MGP_NODShiLtJ_G0000632.1 mouse_genomes_project 1 185242456 185246457 + TEC TEC MGP_NODShiLtJ_T0023220.1 MGP_NODShiLtJ_G0016621.1 mouse_genomes_project 1 196745522 196750725 - Ppox protein_coding retained_intron MGP_NODShiLtJ_T0023221.1 MGP_NODShiLtJ_G0016621.1 mouse_genomes_project 1 196746525 196750725 - Ppox protein_coding retained_intron MGP_NODShiLtJ_T0023222.1 MGP_NODShiLtJ_G0016621.1 mouse_genomes_project 1 196746525 196750725 - MGP_NODShiLtJ_P0023222 Ppox protein_coding protein_coding MGP_NODShiLtJ_T0023223.1 MGP_NODShiLtJ_G0016621.1 mouse_genomes_project 1 196746980 196750298 - MGP_NODShiLtJ_P0023223 Ppox protein_coding protein_coding MGP_NODShiLtJ_T0023224.1 MGP_NODShiLtJ_G0016621.1 mouse_genomes_project 1 196747668 196749365 - Ppox protein_coding retained_intron MGP_NODShiLtJ_T0023225.1 MGP_NODShiLtJ_G0016621.1 mouse_genomes_project 1 196749399 196750060 - Ppox protein_coding processed_transcript MGP_NODShiLtJ_T0023226.1 MGP_NODShiLtJ_G0016621.1 mouse_genomes_project 1 196749646 196750725 - Ppox protein_coding retained_intron MGP_NODShiLtJ_T0023227.1 MGP_NODShiLtJ_G0016621.1 mouse_genomes_project 1 196749902 196750658 - Ppox protein_coding retained_intron MGP_NODShiLtJ_T0011762.1 MGP_NODShiLtJ_G0009870.1 mouse_genomes_project 1 7518650 7519168 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002708.1 MGP_NODShiLtJ_G0002577.1 mouse_genomes_project 1 13719585 13744430 + Gm9947 antisense antisense MGP_NODShiLtJ_T0002709.1 MGP_NODShiLtJ_G0002577.1 mouse_genomes_project 1 13722102 13725022 + Gm9947 antisense antisense MGP_NODShiLtJ_T0002830.1 MGP_NODShiLtJ_G0002668.1 mouse_genomes_project 1 149294608 149297175 + antisense antisense MGP_NODShiLtJ_T0005595.1 MGP_NODShiLtJ_G0004703.1 mouse_genomes_project 1 16285488 16294535 + lincRNA lincRNA MGP_NODShiLtJ_T0000523.1 MGP_NODShiLtJ_G0000459.1 mouse_genomes_project 1 91706453 91708456 - TEC TEC MGP_NODShiLtJ_T0011877.1 MGP_NODShiLtJ_G0009985.1 mouse_genomes_project 1 49040826 49041493 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000471.1 MGP_NODShiLtJ_G0000407.1 mouse_genomes_project 1 67006313 67009761 + TEC TEC MGP_NODShiLtJ_T0020271.1 MGP_NODShiLtJ_G0016008.1 mouse_genomes_project 1 83627817 83630646 - MGP_NODShiLtJ_P0020271 Cxcr1 protein_coding protein_coding MGP_NODShiLtJ_T0020272.1 MGP_NODShiLtJ_G0016008.1 mouse_genomes_project 1 83627817 83629264 - MGP_NODShiLtJ_P0020272 Cxcr1 protein_coding protein_coding MGP_NODShiLtJ_T0011770.1 MGP_NODShiLtJ_G0009878.1 mouse_genomes_project 1 9016789 9018245 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000655.1 MGP_NODShiLtJ_G0000589.1 mouse_genomes_project 1 169350676 169352576 + TEC TEC MGP_NODShiLtJ_T0018779.1 MGP_NODShiLtJ_G0015714.1 mouse_genomes_project 1 13719994 13722639 - MGP_NODShiLtJ_P0018779 Msc protein_coding protein_coding MGP_NODShiLtJ_T0018780.1 MGP_NODShiLtJ_G0015714.1 mouse_genomes_project 1 13720394 13722002 - MGP_NODShiLtJ_P0018780 Msc protein_coding protein_coding MGP_NODShiLtJ_T0018781.1 MGP_NODShiLtJ_G0015714.1 mouse_genomes_project 1 13720583 13721314 - Msc protein_coding retained_intron MGP_NODShiLtJ_T0018782.1 MGP_NODShiLtJ_G0015714.1 mouse_genomes_project 1 13721415 13722641 - Msc protein_coding retained_intron MGP_NODShiLtJ_T0018572.1 MGP_NODShiLtJ_G0015682.1 mouse_genomes_project 1 2342219 2487085 - MGP_NODShiLtJ_P0018572 Rgs20 protein_coding protein_coding MGP_NODShiLtJ_T0018573.1 MGP_NODShiLtJ_G0015682.1 mouse_genomes_project 1 2342219 2550779 - MGP_NODShiLtJ_P0018573 Rgs20 protein_coding protein_coding MGP_NODShiLtJ_T0018574.1 MGP_NODShiLtJ_G0015682.1 mouse_genomes_project 1 2342943 2486272 - MGP_NODShiLtJ_P0018574 Rgs20 protein_coding protein_coding MGP_NODShiLtJ_T0018575.1 MGP_NODShiLtJ_G0015682.1 mouse_genomes_project 1 2343015 2486925 - MGP_NODShiLtJ_P0018575 Rgs20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018576.1 MGP_NODShiLtJ_G0015682.1 mouse_genomes_project 1 2344883 2550776 - MGP_NODShiLtJ_P0018576 Rgs20 protein_coding protein_coding MGP_NODShiLtJ_T0018577.1 MGP_NODShiLtJ_G0015682.1 mouse_genomes_project 1 2355746 2486925 - Rgs20 protein_coding retained_intron MGP_NODShiLtJ_T0018578.1 MGP_NODShiLtJ_G0015682.1 mouse_genomes_project 1 2539959 2550767 - Rgs20 protein_coding processed_transcript MGP_NODShiLtJ_T0005872.1 MGP_NODShiLtJ_G0004919.1 mouse_genomes_project 1 172622984 172661524 - Gm29398 lincRNA lincRNA MGP_NODShiLtJ_T0005873.1 MGP_NODShiLtJ_G0004919.1 mouse_genomes_project 1 172628341 172661523 - Gm29398 lincRNA lincRNA MGP_NODShiLtJ_T0021055.1 MGP_NODShiLtJ_G0016164.1 mouse_genomes_project 1 101965232 101974031 + MGP_NODShiLtJ_P0021055 Cops8 protein_coding protein_coding MGP_NODShiLtJ_T0021056.1 MGP_NODShiLtJ_G0016164.1 mouse_genomes_project 1 101965256 101974902 + Cops8 protein_coding retained_intron MGP_NODShiLtJ_T0021057.1 MGP_NODShiLtJ_G0016164.1 mouse_genomes_project 1 101965258 101973244 + Cops8 protein_coding retained_intron MGP_NODShiLtJ_T0021058.1 MGP_NODShiLtJ_G0016164.1 mouse_genomes_project 1 101965279 101967436 + Cops8 protein_coding retained_intron MGP_NODShiLtJ_T0021059.1 MGP_NODShiLtJ_G0016164.1 mouse_genomes_project 1 101965279 101972815 + Cops8 protein_coding processed_transcript MGP_NODShiLtJ_T0021060.1 MGP_NODShiLtJ_G0016164.1 mouse_genomes_project 1 101971431 101973106 + Cops8 protein_coding retained_intron MGP_NODShiLtJ_T0021061.1 MGP_NODShiLtJ_G0016164.1 mouse_genomes_project 1 101973123 101974171 + Cops8 protein_coding retained_intron MGP_NODShiLtJ_T0011857.1 MGP_NODShiLtJ_G0009965.1 mouse_genomes_project 1 40299734 40300307 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005835.1 MGP_NODShiLtJ_G0004888.1 mouse_genomes_project 1 145394688 145400029 - 4930599A14Rik lincRNA lincRNA MGP_NODShiLtJ_T0005836.1 MGP_NODShiLtJ_G0004888.1 mouse_genomes_project 1 145397219 145400055 - 4930599A14Rik lincRNA lincRNA MGP_NODShiLtJ_T0023072.1 MGP_NODShiLtJ_G0016582.1 mouse_genomes_project 1 192444330 192466123 + MGP_NODShiLtJ_P0023072 Aldh9a1 protein_coding protein_coding MGP_NODShiLtJ_T0023073.1 MGP_NODShiLtJ_G0016582.1 mouse_genomes_project 1 192444575 192449816 + Aldh9a1 protein_coding processed_transcript MGP_NODShiLtJ_T0023074.1 MGP_NODShiLtJ_G0016582.1 mouse_genomes_project 1 192444651 192451218 + Aldh9a1 protein_coding retained_intron MGP_NODShiLtJ_T0023075.1 MGP_NODShiLtJ_G0016582.1 mouse_genomes_project 1 192460804 192465238 + Aldh9a1 protein_coding retained_intron MGP_NODShiLtJ_T0002799.1 MGP_NODShiLtJ_G0002644.1 mouse_genomes_project 1 96980260 96981125 - Gm28626 antisense antisense MGP_NODShiLtJ_T0002728.1 MGP_NODShiLtJ_G0002591.1 mouse_genomes_project 1 37945923 37948463 - Gm38336 antisense antisense MGP_NODShiLtJ_T0021120.1 MGP_NODShiLtJ_G0016174.1 mouse_genomes_project 1 102752081 102779663 + MGP_NODShiLtJ_P0021120 Espnl protein_coding protein_coding MGP_NODShiLtJ_T0021121.1 MGP_NODShiLtJ_G0016174.1 mouse_genomes_project 1 102752139 102777292 + MGP_NODShiLtJ_P0021121 Espnl protein_coding protein_coding MGP_NODShiLtJ_T0016906.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154528719 154529657 - Ptprv processed_transcript retained_intron MGP_NODShiLtJ_T0016907.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154528720 154555500 - Ptprv processed_transcript processed_transcript MGP_NODShiLtJ_T0016908.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154528722 154529529 - Ptprv processed_transcript processed_transcript MGP_NODShiLtJ_T0016909.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154528849 154529810 - Ptprv processed_transcript processed_transcript MGP_NODShiLtJ_T0016910.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154530233 154530682 - Ptprv processed_transcript retained_intron MGP_NODShiLtJ_T0016911.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154530492 154531758 - Ptprv processed_transcript retained_intron MGP_NODShiLtJ_T0016912.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154531386 154532312 - Ptprv processed_transcript processed_transcript MGP_NODShiLtJ_T0016913.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154549386 154555474 - Ptprv processed_transcript processed_transcript MGP_NODShiLtJ_T0016914.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154549404 154551273 - Ptprv processed_transcript retained_intron MGP_NODShiLtJ_T0016915.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154552462 154554070 - Ptprv processed_transcript processed_transcript MGP_NODShiLtJ_T0016916.1 MGP_NODShiLtJ_G0014982.1 mouse_genomes_project 1 154552573 154555449 - Ptprv processed_transcript processed_transcript MGP_NODShiLtJ_T0097866.1 MGP_NODShiLtJ_G0036278.1 mouse_genomes_project 1 136123304 136123421 - Gm22094 rRNA rRNA MGP_NODShiLtJ_T0000436.1 MGP_NODShiLtJ_G0000372.1 mouse_genomes_project 1 40214646 40214789 - TEC TEC MGP_NODShiLtJ_T0000373.1 MGP_NODShiLtJ_G0000311.1 mouse_genomes_project 1 12068853 12070469 - TEC TEC MGP_NODShiLtJ_T0005972.1 MGP_NODShiLtJ_G0004995.1 mouse_genomes_project 1 212195936 212201174 + 4930433J02Rik lincRNA lincRNA MGP_NODShiLtJ_T0000445.1 MGP_NODShiLtJ_G0000381.1 mouse_genomes_project 1 42955653 42956538 - TEC TEC MGP_NODShiLtJ_T0002923.1 MGP_NODShiLtJ_G0002741.1 mouse_genomes_project 1 207822141 207829372 - 2210411M09Rik antisense antisense MGP_NODShiLtJ_T0020734.1 MGP_NODShiLtJ_G0016088.1 mouse_genomes_project 1 93419492 93420484 + MGP_NODShiLtJ_P0020734 Krtap28-13 protein_coding protein_coding MGP_NODShiLtJ_T0099766.1 MGP_NODShiLtJ_G0038160.1 mouse_genomes_project 1 70762324 70762402 + Gm26457 snoRNA snoRNA MGP_NODShiLtJ_T0005748.1 MGP_NODShiLtJ_G0004815.1 mouse_genomes_project 1 90322436 90325861 + Gm29125 lincRNA lincRNA MGP_NODShiLtJ_T0011887.1 MGP_NODShiLtJ_G0009995.1 mouse_genomes_project 1 50461237 50462311 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018886.1 MGP_NODShiLtJ_G0015742.1 mouse_genomes_project 1 21124556 21138951 + MGP_NODShiLtJ_P0018886 Tmem14a protein_coding protein_coding MGP_NODShiLtJ_T0018887.1 MGP_NODShiLtJ_G0015742.1 mouse_genomes_project 1 21124643 21138948 + MGP_NODShiLtJ_P0018887 Tmem14a protein_coding protein_coding MGP_NODShiLtJ_T0000423.1 MGP_NODShiLtJ_G0000360.1 mouse_genomes_project 1 36641249 36645348 - TEC TEC MGP_NODShiLtJ_T0101420.1 MGP_NODShiLtJ_G0039616.1 mouse_genomes_project 1 71604695 71622900 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0002818.1 MGP_NODShiLtJ_G0002661.1 mouse_genomes_project 1 119824507 119831282 + Gm17634 antisense antisense MGP_NODShiLtJ_T0002819.1 MGP_NODShiLtJ_G0002661.1 mouse_genomes_project 1 119825263 119831414 + Gm17634 antisense antisense MGP_NODShiLtJ_T0002820.1 MGP_NODShiLtJ_G0002661.1 mouse_genomes_project 1 119825649 119826013 + Gm17634 antisense antisense MGP_NODShiLtJ_T0000757.1 MGP_NODShiLtJ_G0000689.1 mouse_genomes_project 1 209680063 209682017 + TEC TEC MGP_NODShiLtJ_T0009406.1 MGP_NODShiLtJ_G0007539.1 mouse_genomes_project 1 71750705 71750769 - Mir6899 miRNA miRNA MGP_NODShiLtJ_T0101470.1 MGP_NODShiLtJ_G0039640.1 mouse_genomes_project 1 59651803 59656538 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011834.1 MGP_NODShiLtJ_G0009942.1 mouse_genomes_project 1 36222269 36223962 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005907.1 MGP_NODShiLtJ_G0004945.1 mouse_genomes_project 1 189016457 189020080 - Gm16548 lincRNA lincRNA MGP_NODShiLtJ_T0005973.1 MGP_NODShiLtJ_G0004996.1 mouse_genomes_project 1 212201845 212209390 + Gm37662 lincRNA lincRNA MGP_NODShiLtJ_T0024160.1 MGP_NODShiLtJ_G0016836.1 mouse_genomes_project 1 222929822 222989799 - MGP_NODShiLtJ_P0024160 Cd46 protein_coding protein_coding MGP_NODShiLtJ_T0024161.1 MGP_NODShiLtJ_G0016836.1 mouse_genomes_project 1 222935065 222989775 - MGP_NODShiLtJ_P0024161 Cd46 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024162.1 MGP_NODShiLtJ_G0016836.1 mouse_genomes_project 1 222935088 222979512 - Cd46 protein_coding retained_intron MGP_NODShiLtJ_T0101483.1 MGP_NODShiLtJ_G0039653.1 mouse_genomes_project 1 99152614 99152829 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0020900.1 MGP_NODShiLtJ_G0016129.1 mouse_genomes_project 1 98025615 98026775 + Chrnd protein_coding retained_intron MGP_NODShiLtJ_T0020901.1 MGP_NODShiLtJ_G0016129.1 mouse_genomes_project 1 98025645 98037776 + MGP_NODShiLtJ_P0020901 Chrnd protein_coding protein_coding MGP_NODShiLtJ_T0020902.1 MGP_NODShiLtJ_G0016129.1 mouse_genomes_project 1 98025852 98037775 + MGP_NODShiLtJ_P0020902 Chrnd protein_coding protein_coding MGP_NODShiLtJ_T0011943.1 MGP_NODShiLtJ_G0010051.1 mouse_genomes_project 1 68260119 68260650 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012076.1 MGP_NODShiLtJ_G0010184.1 mouse_genomes_project 1 129616808 129618194 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098236.1 MGP_NODShiLtJ_G0036647.1 mouse_genomes_project 1 158804379 158805847 + 4930596I21Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0009472.1 MGP_NODShiLtJ_G0007605.1 mouse_genomes_project 1 212438602 212438714 + Mir215 miRNA miRNA MGP_NODShiLtJ_T0018622.1 MGP_NODShiLtJ_G0015689.1 mouse_genomes_project 1 4903281 5002279 + MGP_NODShiLtJ_P0018622 Pcmtd1 protein_coding protein_coding MGP_NODShiLtJ_T0018623.1 MGP_NODShiLtJ_G0015689.1 mouse_genomes_project 1 4903407 4988988 + Pcmtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0018624.1 MGP_NODShiLtJ_G0015689.1 mouse_genomes_project 1 4903469 5000771 + Pcmtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0018625.1 MGP_NODShiLtJ_G0015689.1 mouse_genomes_project 1 4975720 4998725 + MGP_NODShiLtJ_P0018625 Pcmtd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018626.1 MGP_NODShiLtJ_G0015689.1 mouse_genomes_project 1 4982952 4991457 + Pcmtd1 protein_coding retained_intron MGP_NODShiLtJ_T0018627.1 MGP_NODShiLtJ_G0015689.1 mouse_genomes_project 1 4988170 5001267 + Pcmtd1 protein_coding retained_intron MGP_NODShiLtJ_T0018628.1 MGP_NODShiLtJ_G0015689.1 mouse_genomes_project 1 4988642 5001308 + Pcmtd1 protein_coding retained_intron MGP_NODShiLtJ_T0009453.1 MGP_NODShiLtJ_G0007586.1 mouse_genomes_project 1 183647638 183647704 + Mir1843b miRNA miRNA MGP_NODShiLtJ_T0019855.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66256299 66295076 - MGP_NODShiLtJ_P0019855 Mpp4 protein_coding protein_coding MGP_NODShiLtJ_T0019856.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66256299 66298044 - MGP_NODShiLtJ_P0019856 Mpp4 protein_coding protein_coding MGP_NODShiLtJ_T0019857.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66256299 66299811 - MGP_NODShiLtJ_P0019857 Mpp4 protein_coding protein_coding MGP_NODShiLtJ_T0019858.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66256300 66298044 - MGP_NODShiLtJ_P0019858 Mpp4 protein_coding protein_coding MGP_NODShiLtJ_T0019859.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66256304 66281321 - Mpp4 protein_coding processed_transcript MGP_NODShiLtJ_T0019860.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66256508 66295069 - MGP_NODShiLtJ_P0019860 Mpp4 protein_coding protein_coding MGP_NODShiLtJ_T0019861.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66256617 66297975 - Mpp4 protein_coding retained_intron MGP_NODShiLtJ_T0019862.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66274690 66287919 - Mpp4 protein_coding retained_intron MGP_NODShiLtJ_T0019863.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66274692 66286210 - Mpp4 protein_coding retained_intron MGP_NODShiLtJ_T0019864.1 MGP_NODShiLtJ_G0015928.1 mouse_genomes_project 1 66283683 66297980 - Mpp4 protein_coding retained_intron MGP_NODShiLtJ_T0016970.1 MGP_NODShiLtJ_G0014998.1 mouse_genomes_project 1 222867243 222914560 + A330023F24Rik processed_transcript lincRNA MGP_NODShiLtJ_T0016971.1 MGP_NODShiLtJ_G0014998.1 mouse_genomes_project 1 222867253 222920442 + A330023F24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0016972.1 MGP_NODShiLtJ_G0014998.1 mouse_genomes_project 1 222910476 222929926 + A330023F24Rik processed_transcript lincRNA MGP_NODShiLtJ_T0016973.1 MGP_NODShiLtJ_G0014998.1 mouse_genomes_project 1 222917122 222930907 + A330023F24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0011931.1 MGP_NODShiLtJ_G0010039.1 mouse_genomes_project 1 65822073 65828848 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005792.1 MGP_NODShiLtJ_G0004855.1 mouse_genomes_project 1 111029056 111045969 + Gm29461 lincRNA lincRNA MGP_NODShiLtJ_T0009402.1 MGP_NODShiLtJ_G0007535.1 mouse_genomes_project 1 70577090 70577195 + Gm44468 miRNA miRNA MGP_NODShiLtJ_T0024095.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220809100 220832865 - MGP_NODShiLtJ_P0024095 Diexf protein_coding protein_coding MGP_NODShiLtJ_T0024096.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220810562 220835747 - MGP_NODShiLtJ_P0024096 Diexf protein_coding protein_coding MGP_NODShiLtJ_T0024097.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220822477 220852682 - MGP_NODShiLtJ_P0024097 Diexf protein_coding protein_coding MGP_NODShiLtJ_T0024098.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220822493 220852654 - MGP_NODShiLtJ_P0024098 Diexf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024099.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220825828 220833568 - Diexf protein_coding retained_intron MGP_NODShiLtJ_T0024100.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220838667 220840661 - Diexf protein_coding retained_intron MGP_NODShiLtJ_T0024101.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220838832 220849494 - Diexf protein_coding processed_transcript MGP_NODShiLtJ_T0024102.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220840231 220852617 - MGP_NODShiLtJ_P0024102 Diexf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024103.1 MGP_NODShiLtJ_G0016826.1 mouse_genomes_project 1 220840249 220842028 - Diexf protein_coding processed_transcript MGP_NODShiLtJ_T0023904.1 MGP_NODShiLtJ_G0016790.1 mouse_genomes_project 1 214238307 214241519 + MGP_NODShiLtJ_P0023904 D1Pas1 protein_coding protein_coding MGP_NODShiLtJ_T0012062.1 MGP_NODShiLtJ_G0010170.1 mouse_genomes_project 1 123880579 123882450 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000400.1 MGP_NODShiLtJ_G0000337.1 mouse_genomes_project 1 25892070 25895502 - TEC TEC MGP_NODShiLtJ_T0000694.1 MGP_NODShiLtJ_G0000628.1 mouse_genomes_project 1 185063436 185065512 - TEC TEC MGP_NODShiLtJ_T0018568.1 MGP_NODShiLtJ_G0015681.1 mouse_genomes_project 1 2284361 2328878 + MGP_NODShiLtJ_P0018568 Tcea1 protein_coding protein_coding MGP_NODShiLtJ_T0018569.1 MGP_NODShiLtJ_G0015681.1 mouse_genomes_project 1 2284461 2327337 + MGP_NODShiLtJ_P0018569 Tcea1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018570.1 MGP_NODShiLtJ_G0015681.1 mouse_genomes_project 1 2284461 2322719 + MGP_NODShiLtJ_P0018570 Tcea1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018571.1 MGP_NODShiLtJ_G0015681.1 mouse_genomes_project 1 2284585 2328882 + MGP_NODShiLtJ_P0018571 Tcea1 protein_coding protein_coding MGP_NODShiLtJ_T0022901.1 MGP_NODShiLtJ_G0016545.1 mouse_genomes_project 1 188774011 188849512 - MGP_NODShiLtJ_P0022901 BC055324 protein_coding protein_coding MGP_NODShiLtJ_T0022903.1 MGP_NODShiLtJ_G0016545.1 mouse_genomes_project 1 188781772 188849512 - MGP_NODShiLtJ_P0022903 BC055324 protein_coding protein_coding MGP_NODShiLtJ_T0022904.1 MGP_NODShiLtJ_G0016545.1 mouse_genomes_project 1 188782293 188793151 - MGP_NODShiLtJ_P0022904 BC055324 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022905.1 MGP_NODShiLtJ_G0016545.1 mouse_genomes_project 1 188783232 188843884 - MGP_NODShiLtJ_P0022905 BC055324 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0022906.1 MGP_NODShiLtJ_G0016545.1 mouse_genomes_project 1 188802670 188807880 - BC055324 protein_coding retained_intron MGP_NODShiLtJ_T0022907.1 MGP_NODShiLtJ_G0016545.1 mouse_genomes_project 1 188840991 188849480 - MGP_NODShiLtJ_P0022907 BC055324 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0022908.1 MGP_NODShiLtJ_G0016545.1 mouse_genomes_project 1 188848970 188849257 - BC055324 protein_coding processed_transcript MGP_NODShiLtJ_T0019140.1 MGP_NODShiLtJ_G0015794.1 mouse_genomes_project 1 39856175 39865886 - MGP_NODShiLtJ_P0019140 Sema4c protein_coding protein_coding MGP_NODShiLtJ_T0019141.1 MGP_NODShiLtJ_G0015794.1 mouse_genomes_project 1 39856178 39865886 - MGP_NODShiLtJ_P0019141 Sema4c protein_coding protein_coding MGP_NODShiLtJ_T0019142.1 MGP_NODShiLtJ_G0015794.1 mouse_genomes_project 1 39856178 39865063 - MGP_NODShiLtJ_P0019142 Sema4c protein_coding protein_coding MGP_NODShiLtJ_T0019143.1 MGP_NODShiLtJ_G0015794.1 mouse_genomes_project 1 39856178 39865094 - MGP_NODShiLtJ_P0019143 Sema4c protein_coding protein_coding MGP_NODShiLtJ_T0019144.1 MGP_NODShiLtJ_G0015794.1 mouse_genomes_project 1 39859262 39860431 - Sema4c protein_coding retained_intron MGP_NODShiLtJ_T0019145.1 MGP_NODShiLtJ_G0015794.1 mouse_genomes_project 1 39860760 39861767 - Sema4c protein_coding retained_intron MGP_NODShiLtJ_T0019146.1 MGP_NODShiLtJ_G0015794.1 mouse_genomes_project 1 39861936 39865071 - MGP_NODShiLtJ_P0019146 Sema4c protein_coding protein_coding MGP_NODShiLtJ_T0019147.1 MGP_NODShiLtJ_G0015794.1 mouse_genomes_project 1 39863468 39865787 - MGP_NODShiLtJ_P0019147 Sema4c protein_coding protein_coding MGP_NODShiLtJ_T0021031.1 MGP_NODShiLtJ_G0016156.1 mouse_genomes_project 1 99738456 99748712 - MGP_NODShiLtJ_P0021031 Glrp1 protein_coding protein_coding MGP_NODShiLtJ_T0002891.1 MGP_NODShiLtJ_G0002715.1 mouse_genomes_project 1 189760841 189772144 - Gm32569 antisense antisense MGP_NODShiLtJ_T0002892.1 MGP_NODShiLtJ_G0002715.1 mouse_genomes_project 1 189760967 189860914 - Gm32569 antisense antisense MGP_NODShiLtJ_T0099796.1 MGP_NODShiLtJ_G0038190.1 mouse_genomes_project 1 151988679 151988800 - Gm22609 snoRNA snoRNA MGP_NODShiLtJ_T0013443.1 MGP_NODShiLtJ_G0011551.1 mouse_genomes_project 2 64621211 64621641 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100397.1 MGP_NODShiLtJ_G0038791.1 mouse_genomes_project 2 146822445 146822513 + Snord110 snoRNA snoRNA MGP_NODShiLtJ_T0011402.1 MGP_NODShiLtJ_G0009535.1 mouse_genomes_project 2 142550589 142550881 - Gm24739 misc_RNA misc_RNA MGP_NODShiLtJ_T0013605.1 MGP_NODShiLtJ_G0011713.1 mouse_genomes_project 2 126350420 126351354 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058000.1 MGP_NODShiLtJ_G0026491.1 mouse_genomes_project 2 171796621 171797319 - MGP_NODShiLtJ_P0058000 Defb25 protein_coding protein_coding MGP_NODShiLtJ_T0007346.1 MGP_NODShiLtJ_G0006015.1 mouse_genomes_project 2 188577145 188584252 - 1200007C13Rik lincRNA lincRNA MGP_NODShiLtJ_T0057740.1 MGP_NODShiLtJ_G0026407.1 mouse_genomes_project 2 162933779 162935092 + MGP_NODShiLtJ_P0057740 Gm561 protein_coding protein_coding MGP_NODShiLtJ_T0011391.1 MGP_NODShiLtJ_G0009524.1 mouse_genomes_project 2 72966763 72967047 + Gm23046 misc_RNA misc_RNA MGP_NODShiLtJ_T0052059.1 MGP_NODShiLtJ_G0025152.1 mouse_genomes_project 2 1677926 1710984 - MGP_NODShiLtJ_P0052059 Prpf18 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052060.1 MGP_NODShiLtJ_G0025152.1 mouse_genomes_project 2 1677926 1711089 - MGP_NODShiLtJ_P0052060 Prpf18 protein_coding protein_coding MGP_NODShiLtJ_T0052061.1 MGP_NODShiLtJ_G0025152.1 mouse_genomes_project 2 1679805 1711109 - Prpf18 protein_coding processed_transcript MGP_NODShiLtJ_T0052062.1 MGP_NODShiLtJ_G0025152.1 mouse_genomes_project 2 1679896 1711116 - MGP_NODShiLtJ_P0052062 Prpf18 protein_coding protein_coding MGP_NODShiLtJ_T0052063.1 MGP_NODShiLtJ_G0025152.1 mouse_genomes_project 2 1696090 1711084 - MGP_NODShiLtJ_P0052063 Prpf18 protein_coding protein_coding MGP_NODShiLtJ_T0052064.1 MGP_NODShiLtJ_G0025152.1 mouse_genomes_project 2 1696114 1711090 - Prpf18 protein_coding processed_transcript MGP_NODShiLtJ_T0052065.1 MGP_NODShiLtJ_G0025152.1 mouse_genomes_project 2 1702689 1711106 - Prpf18 protein_coding processed_transcript MGP_NODShiLtJ_T0004097.1 MGP_NODShiLtJ_G0003619.1 mouse_genomes_project 2 183709421 183753325 - Hnf4aos antisense antisense MGP_NODShiLtJ_T0004098.1 MGP_NODShiLtJ_G0003619.1 mouse_genomes_project 2 183709421 183753325 - Hnf4aos antisense antisense MGP_NODShiLtJ_T0004099.1 MGP_NODShiLtJ_G0003619.1 mouse_genomes_project 2 183709808 183753297 - Hnf4aos antisense antisense MGP_NODShiLtJ_T0007071.1 MGP_NODShiLtJ_G0005795.1 mouse_genomes_project 2 3710941 3717561 + Gm13391 lincRNA lincRNA MGP_NODShiLtJ_T0007072.1 MGP_NODShiLtJ_G0005795.1 mouse_genomes_project 2 3711212 3712053 + Gm13391 lincRNA lincRNA MGP_NODShiLtJ_T0052836.1 MGP_NODShiLtJ_G0025284.1 mouse_genomes_project 2 25086940 25106829 + MGP_NODShiLtJ_P0052836 Abca2 protein_coding protein_coding MGP_NODShiLtJ_T0052837.1 MGP_NODShiLtJ_G0025284.1 mouse_genomes_project 2 25099578 25101188 + Abca2 protein_coding processed_transcript MGP_NODShiLtJ_T0052838.1 MGP_NODShiLtJ_G0025284.1 mouse_genomes_project 2 25101218 25102084 + Abca2 protein_coding processed_transcript MGP_NODShiLtJ_T0052839.1 MGP_NODShiLtJ_G0025284.1 mouse_genomes_project 2 25103432 25105154 + Abca2 protein_coding processed_transcript MGP_NODShiLtJ_T0052840.1 MGP_NODShiLtJ_G0025284.1 mouse_genomes_project 2 25103953 25105356 + Abca2 protein_coding processed_transcript MGP_NODShiLtJ_T0052841.1 MGP_NODShiLtJ_G0025284.1 mouse_genomes_project 2 25104110 25104831 + Abca2 protein_coding processed_transcript MGP_NODShiLtJ_T0052842.1 MGP_NODShiLtJ_G0025284.1 mouse_genomes_project 2 25104131 25104765 + Abca2 protein_coding processed_transcript MGP_NODShiLtJ_T0013722.1 MGP_NODShiLtJ_G0011830.1 mouse_genomes_project 2 176451214 176463213 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059209.1 MGP_NODShiLtJ_G0026753.1 mouse_genomes_project 2 191499073 191513866 - MGP_NODShiLtJ_P0059209 Cyp24a1 protein_coding protein_coding MGP_NODShiLtJ_T0057341.1 MGP_NODShiLtJ_G0026320.1 mouse_genomes_project 2 146963107 146964541 + MGP_NODShiLtJ_P0057341 Tmem239 protein_coding protein_coding MGP_NODShiLtJ_T0100415.1 MGP_NODShiLtJ_G0038809.1 mouse_genomes_project 2 178126639 178126770 - Gm24411 snoRNA snoRNA MGP_NODShiLtJ_T0013548.1 MGP_NODShiLtJ_G0011656.1 mouse_genomes_project 2 102648238 102649496 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055022.1 MGP_NODShiLtJ_G0025673.1 mouse_genomes_project 2 80478912 80504605 + MGP_NODShiLtJ_P0055022 Scrn3 protein_coding protein_coding MGP_NODShiLtJ_T0055023.1 MGP_NODShiLtJ_G0025673.1 mouse_genomes_project 2 80478965 80487635 + MGP_NODShiLtJ_P0055023 Scrn3 protein_coding protein_coding MGP_NODShiLtJ_T0055024.1 MGP_NODShiLtJ_G0025673.1 mouse_genomes_project 2 80478970 80482484 + Scrn3 protein_coding processed_transcript MGP_NODShiLtJ_T0055025.1 MGP_NODShiLtJ_G0025673.1 mouse_genomes_project 2 80478970 80496579 + Scrn3 protein_coding processed_transcript MGP_NODShiLtJ_T0055026.1 MGP_NODShiLtJ_G0025673.1 mouse_genomes_project 2 80478987 80488861 + Scrn3 protein_coding processed_transcript MGP_NODShiLtJ_T0055027.1 MGP_NODShiLtJ_G0025673.1 mouse_genomes_project 2 80486238 80503086 + Scrn3 protein_coding processed_transcript MGP_NODShiLtJ_T0013298.1 MGP_NODShiLtJ_G0011406.1 mouse_genomes_project 2 5656430 5657084 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059097.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122687 188189986 + MGP_NODShiLtJ_P0059097 Slc9a8 protein_coding protein_coding MGP_NODShiLtJ_T0059098.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122696 188189984 + MGP_NODShiLtJ_P0059098 Slc9a8 protein_coding protein_coding MGP_NODShiLtJ_T0059099.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122696 188187622 + MGP_NODShiLtJ_P0059099 Slc9a8 protein_coding protein_coding MGP_NODShiLtJ_T0059100.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122698 188127110 + Slc9a8 protein_coding retained_intron MGP_NODShiLtJ_T0059101.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122705 188150340 + Slc9a8 protein_coding retained_intron MGP_NODShiLtJ_T0059102.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122707 188189985 + Slc9a8 protein_coding processed_transcript MGP_NODShiLtJ_T0059103.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122712 188137875 + Slc9a8 protein_coding retained_intron MGP_NODShiLtJ_T0059104.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122713 188180597 + Slc9a8 protein_coding processed_transcript MGP_NODShiLtJ_T0059105.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188122717 188189985 + Slc9a8 protein_coding processed_transcript MGP_NODShiLtJ_T0059106.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188125094 188180624 + Slc9a8 protein_coding processed_transcript MGP_NODShiLtJ_T0059107.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188154355 188180622 + Slc9a8 protein_coding processed_transcript MGP_NODShiLtJ_T0059108.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188154444 188182021 + Slc9a8 protein_coding processed_transcript MGP_NODShiLtJ_T0059109.1 MGP_NODShiLtJ_G0026730.1 mouse_genomes_project 2 188154544 188189985 + Slc9a8 protein_coding processed_transcript MGP_NODShiLtJ_T0055928.1 MGP_NODShiLtJ_G0025991.1 mouse_genomes_project 2 103374053 103383100 - MGP_NODShiLtJ_P0055928 Mapk8ip1 protein_coding protein_coding MGP_NODShiLtJ_T0055929.1 MGP_NODShiLtJ_G0025991.1 mouse_genomes_project 2 103374057 103392560 - MGP_NODShiLtJ_P0055929 Mapk8ip1 protein_coding protein_coding MGP_NODShiLtJ_T0055930.1 MGP_NODShiLtJ_G0025991.1 mouse_genomes_project 2 103380270 103383101 - Mapk8ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0013687.1 MGP_NODShiLtJ_G0011795.1 mouse_genomes_project 2 165815312 165816288 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059232.1 MGP_NODShiLtJ_G0026763.1 mouse_genomes_project 2 193627848 193662202 + MGP_NODShiLtJ_P0059232 Rtfdc1 protein_coding protein_coding MGP_NODShiLtJ_T0059233.1 MGP_NODShiLtJ_G0026763.1 mouse_genomes_project 2 193627894 193657469 + Rtfdc1 protein_coding retained_intron MGP_NODShiLtJ_T0059236.1 MGP_NODShiLtJ_G0026763.1 mouse_genomes_project 2 193640606 193662202 + Rtfdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057508.1 MGP_NODShiLtJ_G0026355.1 mouse_genomes_project 2 148770994 148867014 - MGP_NODShiLtJ_P0057508 Slc23a2 protein_coding protein_coding MGP_NODShiLtJ_T0057509.1 MGP_NODShiLtJ_G0026355.1 mouse_genomes_project 2 148773912 148775184 - Slc23a2 protein_coding processed_transcript MGP_NODShiLtJ_T0057510.1 MGP_NODShiLtJ_G0026355.1 mouse_genomes_project 2 148779206 148785571 - Slc23a2 protein_coding processed_transcript MGP_NODShiLtJ_T0057511.1 MGP_NODShiLtJ_G0026355.1 mouse_genomes_project 2 148793266 148867014 - Slc23a2 protein_coding processed_transcript MGP_NODShiLtJ_T0057512.1 MGP_NODShiLtJ_G0026355.1 mouse_genomes_project 2 148794038 148796236 - Slc23a2 protein_coding processed_transcript MGP_NODShiLtJ_T0057513.1 MGP_NODShiLtJ_G0026355.1 mouse_genomes_project 2 148807330 148814081 - Slc23a2 protein_coding processed_transcript MGP_NODShiLtJ_T0057514.1 MGP_NODShiLtJ_G0026355.1 mouse_genomes_project 2 148813675 148830845 - MGP_NODShiLtJ_P0057514 Slc23a2 protein_coding protein_coding MGP_NODShiLtJ_T0011414.1 MGP_NODShiLtJ_G0009547.1 mouse_genomes_project 2 187706175 187706364 + Gm27494 misc_RNA misc_RNA MGP_NODShiLtJ_T0003935.1 MGP_NODShiLtJ_G0003504.1 mouse_genomes_project 2 72488752 72494177 + Gm13618 antisense antisense MGP_NODShiLtJ_T0058687.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 180926281 181115121 - MGP_NODShiLtJ_P0058687 Chd6 protein_coding protein_coding MGP_NODShiLtJ_T0058688.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 180939347 180940920 - Chd6 protein_coding processed_transcript MGP_NODShiLtJ_T0058689.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 180939462 180944195 - Chd6 protein_coding processed_transcript MGP_NODShiLtJ_T0058690.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 180960704 180965268 - Chd6 protein_coding retained_intron MGP_NODShiLtJ_T0058691.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 180963406 181115121 - MGP_NODShiLtJ_P0058691 Chd6 protein_coding protein_coding MGP_NODShiLtJ_T0058692.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 180972863 180992812 - Chd6 protein_coding retained_intron MGP_NODShiLtJ_T0058693.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 180992352 181115174 - Chd6 protein_coding retained_intron MGP_NODShiLtJ_T0058694.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 180998410 181002568 - Chd6 protein_coding processed_transcript MGP_NODShiLtJ_T0058695.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 181010169 181013832 - Chd6 protein_coding processed_transcript MGP_NODShiLtJ_T0058696.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 181014122 181037750 - MGP_NODShiLtJ_P0058696 Chd6 protein_coding protein_coding MGP_NODShiLtJ_T0058697.1 MGP_NODShiLtJ_G0026630.1 mouse_genomes_project 2 181019314 181115103 - Chd6 protein_coding retained_intron MGP_NODShiLtJ_T0010285.1 MGP_NODShiLtJ_G0008418.1 mouse_genomes_project 2 27182779 27182879 + Gm24049 miRNA miRNA MGP_NODShiLtJ_T0056993.1 MGP_NODShiLtJ_G0026235.1 mouse_genomes_project 2 138581072 138584824 + MGP_NODShiLtJ_P0056993 AA467197 protein_coding protein_coding MGP_NODShiLtJ_T0056994.1 MGP_NODShiLtJ_G0026235.1 mouse_genomes_project 2 138581937 138585287 + MGP_NODShiLtJ_P0056994 AA467197 protein_coding protein_coding MGP_NODShiLtJ_T0056995.1 MGP_NODShiLtJ_G0026235.1 mouse_genomes_project 2 138582002 138585038 + AA467197 protein_coding processed_transcript MGP_NODShiLtJ_T0056996.1 MGP_NODShiLtJ_G0026235.1 mouse_genomes_project 2 138582002 138585180 + MGP_NODShiLtJ_P0056996 AA467197 protein_coding protein_coding MGP_NODShiLtJ_T0058729.1 MGP_NODShiLtJ_G0026638.1 mouse_genomes_project 2 183279093 183279915 - MGP_NODShiLtJ_P0058729 Gtsf1l protein_coding protein_coding MGP_NODShiLtJ_T0007080.1 MGP_NODShiLtJ_G0005801.1 mouse_genomes_project 2 7380581 7390895 - Gm13218 lincRNA lincRNA MGP_NODShiLtJ_T0055447.1 MGP_NODShiLtJ_G0025782.1 mouse_genomes_project 2 95081749 95092477 + MGP_NODShiLtJ_P0055447 Olfr1032 protein_coding protein_coding MGP_NODShiLtJ_T0097800.1 MGP_NODShiLtJ_G0036212.1 mouse_genomes_project 2 116239106 116239605 + pseudogene pseudogene MGP_NODShiLtJ_T0057495.1 MGP_NODShiLtJ_G0026350.1 mouse_genomes_project 2 148559776 148565826 - MGP_NODShiLtJ_P0057495 Erv3 protein_coding protein_coding MGP_NODShiLtJ_T0010272.1 MGP_NODShiLtJ_G0008405.1 mouse_genomes_project 2 15584174 15584284 - Gm24933 miRNA miRNA MGP_NODShiLtJ_T0100423.1 MGP_NODShiLtJ_G0038817.1 mouse_genomes_project 2 184941072 184941203 + Gm24473 snoRNA snoRNA MGP_NODShiLtJ_T0055599.1 MGP_NODShiLtJ_G0025921.1 mouse_genomes_project 2 99792354 99793272 - MGP_NODShiLtJ_P0055599 Olfr1233 protein_coding protein_coding MGP_NODShiLtJ_T0007376.1 MGP_NODShiLtJ_G0006042.1 mouse_genomes_project 2 201888684 201903890 - B230312C02Rik lincRNA lincRNA MGP_NODShiLtJ_T0057990.1 MGP_NODShiLtJ_G0026482.1 mouse_genomes_project 2 171635432 171640944 - MGP_NODShiLtJ_P0057990 Defb22 protein_coding protein_coding MGP_NODShiLtJ_T0058918.1 MGP_NODShiLtJ_G0026699.1 mouse_genomes_project 2 185238152 185241808 + Pcif1 protein_coding retained_intron MGP_NODShiLtJ_T0058919.1 MGP_NODShiLtJ_G0026699.1 mouse_genomes_project 2 185238213 185253100 + MGP_NODShiLtJ_P0058919 Pcif1 protein_coding protein_coding MGP_NODShiLtJ_T0058920.1 MGP_NODShiLtJ_G0026699.1 mouse_genomes_project 2 185238900 185241719 + Pcif1 protein_coding retained_intron MGP_NODShiLtJ_T0058921.1 MGP_NODShiLtJ_G0026699.1 mouse_genomes_project 2 185242541 185243303 + Pcif1 protein_coding retained_intron MGP_NODShiLtJ_T0010236.1 MGP_NODShiLtJ_G0008369.1 mouse_genomes_project 2 8305924 8306008 + Mir466m miRNA miRNA MGP_NODShiLtJ_T0056069.1 MGP_NODShiLtJ_G0026020.1 mouse_genomes_project 2 115554469 115557603 - MGP_NODShiLtJ_P0056069 Fjx1 protein_coding protein_coding MGP_NODShiLtJ_T0055540.1 MGP_NODShiLtJ_G0025865.1 mouse_genomes_project 2 97992899 97993856 - MGP_NODShiLtJ_P0055540 Olfr74 protein_coding protein_coding MGP_NODShiLtJ_T0004092.1 MGP_NODShiLtJ_G0003615.1 mouse_genomes_project 2 180812972 180862260 - Gm16751 antisense antisense MGP_NODShiLtJ_T0059418.1 MGP_NODShiLtJ_G0026812.1 mouse_genomes_project 2 202113747 202118078 + MGP_NODShiLtJ_P0059418 Mrgbp protein_coding protein_coding MGP_NODShiLtJ_T0059419.1 MGP_NODShiLtJ_G0026812.1 mouse_genomes_project 2 202115155 202118731 + MGP_NODShiLtJ_P0059419 Mrgbp protein_coding protein_coding MGP_NODShiLtJ_T0059420.1 MGP_NODShiLtJ_G0026812.1 mouse_genomes_project 2 202115166 202118748 + Mrgbp protein_coding retained_intron MGP_NODShiLtJ_T0059421.1 MGP_NODShiLtJ_G0026812.1 mouse_genomes_project 2 202115169 202118748 + Mrgbp protein_coding retained_intron MGP_NODShiLtJ_T0059422.1 MGP_NODShiLtJ_G0026812.1 mouse_genomes_project 2 202115175 202118748 + Mrgbp protein_coding retained_intron MGP_NODShiLtJ_T0059423.1 MGP_NODShiLtJ_G0026812.1 mouse_genomes_project 2 202115201 202118748 + Mrgbp protein_coding retained_intron MGP_NODShiLtJ_T0059333.1 MGP_NODShiLtJ_G0026791.1 mouse_genomes_project 2 199463513 199694085 + MGP_NODShiLtJ_P0059333 Phactr3 protein_coding protein_coding MGP_NODShiLtJ_T0059334.1 MGP_NODShiLtJ_G0026791.1 mouse_genomes_project 2 199463717 199692084 + MGP_NODShiLtJ_P0059334 Phactr3 protein_coding protein_coding MGP_NODShiLtJ_T0059335.1 MGP_NODShiLtJ_G0026791.1 mouse_genomes_project 2 199488163 199692089 + MGP_NODShiLtJ_P0059335 Phactr3 protein_coding protein_coding MGP_NODShiLtJ_T0059336.1 MGP_NODShiLtJ_G0026791.1 mouse_genomes_project 2 199521103 199692084 + MGP_NODShiLtJ_P0059336 Phactr3 protein_coding protein_coding MGP_NODShiLtJ_T0059337.1 MGP_NODShiLtJ_G0026791.1 mouse_genomes_project 2 199683148 199687359 + Phactr3 protein_coding retained_intron MGP_NODShiLtJ_T0059338.1 MGP_NODShiLtJ_G0026791.1 mouse_genomes_project 2 199683384 199688423 + Phactr3 protein_coding retained_intron MGP_NODShiLtJ_T0052726.1 MGP_NODShiLtJ_G0025264.1 mouse_genomes_project 2 24860971 24863716 - MGP_NODShiLtJ_P0052726 protein_coding protein_coding MGP_NODShiLtJ_T0052727.1 MGP_NODShiLtJ_G0025264.1 mouse_genomes_project 2 24862536 24863668 - protein_coding processed_transcript MGP_NODShiLtJ_T0058235.1 MGP_NODShiLtJ_G0026553.1 mouse_genomes_project 2 174892903 174897894 + MGP_NODShiLtJ_P0058235 Trp53inp2 protein_coding protein_coding MGP_NODShiLtJ_T0058236.1 MGP_NODShiLtJ_G0026553.1 mouse_genomes_project 2 174893658 174901613 + MGP_NODShiLtJ_P0058236 Trp53inp2 protein_coding protein_coding MGP_NODShiLtJ_T0058237.1 MGP_NODShiLtJ_G0026553.1 mouse_genomes_project 2 174893684 174898518 + MGP_NODShiLtJ_P0058237 Trp53inp2 protein_coding protein_coding MGP_NODShiLtJ_T0058238.1 MGP_NODShiLtJ_G0026553.1 mouse_genomes_project 2 174893704 174897793 + Trp53inp2 protein_coding retained_intron MGP_NODShiLtJ_T0058239.1 MGP_NODShiLtJ_G0026553.1 mouse_genomes_project 2 174894046 174897805 + MGP_NODShiLtJ_P0058239 Trp53inp2 protein_coding protein_coding MGP_NODShiLtJ_T0054493.1 MGP_NODShiLtJ_G0025575.1 mouse_genomes_project 2 57167766 57195281 + Arl6ip6 protein_coding processed_transcript MGP_NODShiLtJ_T0054494.1 MGP_NODShiLtJ_G0025575.1 mouse_genomes_project 2 57168128 57196884 + MGP_NODShiLtJ_P0054494 Arl6ip6 protein_coding protein_coding MGP_NODShiLtJ_T0013539.1 MGP_NODShiLtJ_G0011647.1 mouse_genomes_project 2 97537749 97538206 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013520.1 MGP_NODShiLtJ_G0011628.1 mouse_genomes_project 2 92828931 92829756 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054185.1 MGP_NODShiLtJ_G0025508.1 mouse_genomes_project 2 37213418 37214354 + MGP_NODShiLtJ_P0054185 Olfr345 protein_coding protein_coding MGP_NODShiLtJ_T0010334.1 MGP_NODShiLtJ_G0008467.1 mouse_genomes_project 2 105391402 105391492 - Mir129-2 miRNA miRNA MGP_NODShiLtJ_T0098190.1 MGP_NODShiLtJ_G0036602.1 mouse_genomes_project 2 117239153 117239292 + Gm24644 scaRNA scaRNA MGP_NODShiLtJ_T0011385.1 MGP_NODShiLtJ_G0009518.1 mouse_genomes_project 2 47649325 47649456 + Gm27761 misc_RNA misc_RNA MGP_NODShiLtJ_T0057281.1 MGP_NODShiLtJ_G0026306.1 mouse_genomes_project 2 145969891 146048400 - MGP_NODShiLtJ_P0057281 F830045P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0017766.1 MGP_NODShiLtJ_G0015358.1 mouse_genomes_project 2 186343616 186344967 + BC046401 processed_transcript processed_transcript MGP_NODShiLtJ_T0013327.1 MGP_NODShiLtJ_G0011435.1 mouse_genomes_project 2 17136996 17137407 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055459.1 MGP_NODShiLtJ_G0025794.1 mouse_genomes_project 2 95377810 95378773 - MGP_NODShiLtJ_P0055459 Olfr1048 protein_coding protein_coding MGP_NODShiLtJ_T0058482.1 MGP_NODShiLtJ_G0026587.1 mouse_genomes_project 2 176376728 176383746 + MGP_NODShiLtJ_P0058482 Myl9 protein_coding protein_coding MGP_NODShiLtJ_T0058483.1 MGP_NODShiLtJ_G0026587.1 mouse_genomes_project 2 176376762 176383449 + Myl9 protein_coding processed_transcript MGP_NODShiLtJ_T0058484.1 MGP_NODShiLtJ_G0026587.1 mouse_genomes_project 2 176376765 176382622 + Myl9 protein_coding processed_transcript MGP_NODShiLtJ_T0058485.1 MGP_NODShiLtJ_G0026587.1 mouse_genomes_project 2 176380604 176383252 + Myl9 protein_coding processed_transcript MGP_NODShiLtJ_T0057705.1 MGP_NODShiLtJ_G0026400.1 mouse_genomes_project 2 162610689 162638124 - MGP_NODShiLtJ_P0057705 Ovol2 protein_coding protein_coding MGP_NODShiLtJ_T0057706.1 MGP_NODShiLtJ_G0026400.1 mouse_genomes_project 2 162610689 162638575 - MGP_NODShiLtJ_P0057706 Ovol2 protein_coding protein_coding MGP_NODShiLtJ_T0057707.1 MGP_NODShiLtJ_G0026400.1 mouse_genomes_project 2 162623255 162637755 - Ovol2 protein_coding processed_transcript MGP_NODShiLtJ_T0055083.1 MGP_NODShiLtJ_G0025684.1 mouse_genomes_project 2 81962635 81970130 + Hoxd11 protein_coding processed_transcript MGP_NODShiLtJ_T0055084.1 MGP_NODShiLtJ_G0025684.1 mouse_genomes_project 2 81965401 81967292 + MGP_NODShiLtJ_P0055084 Hoxd11 protein_coding protein_coding MGP_NODShiLtJ_T0056488.1 MGP_NODShiLtJ_G0026135.1 mouse_genomes_project 2 134197969 134202830 - MGP_NODShiLtJ_P0056488 Ankrd63 protein_coding protein_coding MGP_NODShiLtJ_T0055565.1 MGP_NODShiLtJ_G0025888.1 mouse_genomes_project 2 98892592 98893519 - MGP_NODShiLtJ_P0055565 Olfr1195 protein_coding protein_coding MGP_NODShiLtJ_T0055419.1 MGP_NODShiLtJ_G0025757.1 mouse_genomes_project 2 93957066 93960759 + MGP_NODShiLtJ_P0055419 Aplnr protein_coding protein_coding MGP_NODShiLtJ_T0055420.1 MGP_NODShiLtJ_G0025757.1 mouse_genomes_project 2 93958228 93960757 + MGP_NODShiLtJ_P0055420 Aplnr protein_coding protein_coding MGP_NODShiLtJ_T0058929.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185322908 185326256 + MGP_NODShiLtJ_P0058929 Slc12a5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058930.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185322922 185339147 + Slc12a5 protein_coding processed_transcript MGP_NODShiLtJ_T0058931.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185322930 185366745 + MGP_NODShiLtJ_P0058931 Slc12a5 protein_coding protein_coding MGP_NODShiLtJ_T0058932.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185322952 185368880 + MGP_NODShiLtJ_P0058932 Slc12a5 protein_coding protein_coding MGP_NODShiLtJ_T0058933.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185331478 185368889 + MGP_NODShiLtJ_P0058933 Slc12a5 protein_coding protein_coding MGP_NODShiLtJ_T0058934.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185331734 185368885 + MGP_NODShiLtJ_P0058934 Slc12a5 protein_coding protein_coding MGP_NODShiLtJ_T0058935.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185331776 185358553 + MGP_NODShiLtJ_P0058935 Slc12a5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058936.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185350715 185354920 + Slc12a5 protein_coding retained_intron MGP_NODShiLtJ_T0058937.1 MGP_NODShiLtJ_G0026702.1 mouse_genomes_project 2 185365766 185368880 + Slc12a5 protein_coding retained_intron MGP_NODShiLtJ_T0054775.1 MGP_NODShiLtJ_G0025623.1 mouse_genomes_project 2 73957680 74044624 + MGP_NODShiLtJ_P0054775 Xirp2 protein_coding protein_coding MGP_NODShiLtJ_T0054776.1 MGP_NODShiLtJ_G0025623.1 mouse_genomes_project 2 73957680 74044632 + MGP_NODShiLtJ_P0054776 Xirp2 protein_coding protein_coding MGP_NODShiLtJ_T0058995.1 MGP_NODShiLtJ_G0026713.1 mouse_genomes_project 2 185925892 185932177 - MGP_NODShiLtJ_P0058995 Trp53rka protein_coding protein_coding MGP_NODShiLtJ_T0058996.1 MGP_NODShiLtJ_G0026713.1 mouse_genomes_project 2 185927422 185931963 - Trp53rka protein_coding processed_transcript MGP_NODShiLtJ_T0053079.1 MGP_NODShiLtJ_G0025330.1 mouse_genomes_project 2 26334083 26384698 + MGP_NODShiLtJ_P0053079 Gm20532 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007362.1 MGP_NODShiLtJ_G0006029.1 mouse_genomes_project 2 191027176 191036595 - A630075F10Rik lincRNA lincRNA MGP_NODShiLtJ_T0101792.1 MGP_NODShiLtJ_G0039960.1 mouse_genomes_project 2 37485413 37485995 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007160.1 MGP_NODShiLtJ_G0005865.1 mouse_genomes_project 2 73624550 73635645 + Gm1322 lincRNA lincRNA MGP_NODShiLtJ_T0003919.1 MGP_NODShiLtJ_G0003492.1 mouse_genomes_project 2 63368741 63378002 + Gm13546 antisense antisense MGP_NODShiLtJ_T0003920.1 MGP_NODShiLtJ_G0003492.1 mouse_genomes_project 2 63370691 63377276 + Gm13546 antisense antisense MGP_NODShiLtJ_T0055249.1 MGP_NODShiLtJ_G0025719.1 mouse_genomes_project 2 88117799 88120683 + MGP_NODShiLtJ_P0055249 Prdx6b protein_coding protein_coding MGP_NODShiLtJ_T0099124.1 MGP_NODShiLtJ_G0037518.1 mouse_genomes_project 2 132289960 132290095 - Gm25514 snRNA snRNA MGP_NODShiLtJ_T0055550.1 MGP_NODShiLtJ_G0025874.1 mouse_genomes_project 2 98222308 98268748 - MGP_NODShiLtJ_P0055550 Olfr1167 protein_coding protein_coding MGP_NODShiLtJ_T0013318.1 MGP_NODShiLtJ_G0011426.1 mouse_genomes_project 2 13691907 13695944 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013325.1 MGP_NODShiLtJ_G0011433.1 mouse_genomes_project 2 16934940 16935354 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013407.1 MGP_NODShiLtJ_G0011515.1 mouse_genomes_project 2 52231916 52232887 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013351.1 MGP_NODShiLtJ_G0011459.1 mouse_genomes_project 2 25216552 25216792 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052996.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26050939 26079368 + MGP_NODShiLtJ_P0052996 Gpsm1 protein_coding protein_coding MGP_NODShiLtJ_T0052997.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26050969 26079368 + MGP_NODShiLtJ_P0052997 Gpsm1 protein_coding protein_coding MGP_NODShiLtJ_T0052998.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26055119 26079368 + MGP_NODShiLtJ_P0052998 Gpsm1 protein_coding protein_coding MGP_NODShiLtJ_T0052999.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26058937 26079368 + MGP_NODShiLtJ_P0052999 Gpsm1 protein_coding protein_coding MGP_NODShiLtJ_T0053000.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26060679 26063033 + Gpsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053001.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26061190 26071581 + Gpsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053002.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26061380 26071051 + Gpsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053003.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26066780 26079368 + MGP_NODShiLtJ_P0053003 Gpsm1 protein_coding protein_coding MGP_NODShiLtJ_T0053004.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26066823 26071662 + MGP_NODShiLtJ_P0053004 Gpsm1 protein_coding protein_coding MGP_NODShiLtJ_T0053005.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26070561 26076462 + Gpsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053006.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26070578 26075855 + Gpsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053007.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26073419 26078406 + Gpsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053008.1 MGP_NODShiLtJ_G0025320.1 mouse_genomes_project 2 26075368 26078041 + Gpsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0003982.1 MGP_NODShiLtJ_G0003535.1 mouse_genomes_project 2 104475941 104491053 + Gm13807 antisense antisense MGP_NODShiLtJ_T0055481.1 MGP_NODShiLtJ_G0025816.1 mouse_genomes_project 2 96294133 96295126 + MGP_NODShiLtJ_P0055481 Olfr1094 protein_coding protein_coding MGP_NODShiLtJ_T0013339.1 MGP_NODShiLtJ_G0011447.1 mouse_genomes_project 2 20535951 20536586 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003943.1 MGP_NODShiLtJ_G0003511.1 mouse_genomes_project 2 77376690 77454682 - Gad1os antisense antisense MGP_NODShiLtJ_T0003944.1 MGP_NODShiLtJ_G0003511.1 mouse_genomes_project 2 77376997 77378221 - Gad1os antisense antisense MGP_NODShiLtJ_T0001063.1 MGP_NODShiLtJ_G0000989.1 mouse_genomes_project 2 82707281 82707875 - TEC TEC MGP_NODShiLtJ_T0052706.1 MGP_NODShiLtJ_G0025259.1 mouse_genomes_project 2 24818410 24820992 + MGP_NODShiLtJ_P0052706 Nrarp protein_coding protein_coding MGP_NODShiLtJ_T0011406.1 MGP_NODShiLtJ_G0009539.1 mouse_genomes_project 2 163872475 163872800 - Gm22390 misc_RNA misc_RNA MGP_NODShiLtJ_T0058189.1 MGP_NODShiLtJ_G0026544.1 mouse_genomes_project 2 174220581 174221357 - Gm14214 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0058190.1 MGP_NODShiLtJ_G0026544.1 mouse_genomes_project 2 174220581 174221259 - MGP_NODShiLtJ_P0058190 Gm14214 protein_coding protein_coding MGP_NODShiLtJ_T0013606.1 MGP_NODShiLtJ_G0011714.1 mouse_genomes_project 2 126358508 126358664 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013337.1 MGP_NODShiLtJ_G0011445.1 mouse_genomes_project 2 18954073 18955502 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058519.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176738576 176785041 - MGP_NODShiLtJ_P0058519 Samhd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058520.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176738581 176785046 - MGP_NODShiLtJ_P0058520 Samhd1 protein_coding protein_coding MGP_NODShiLtJ_T0058521.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176740515 176784901 - MGP_NODShiLtJ_P0058521 Samhd1 protein_coding protein_coding MGP_NODShiLtJ_T0058522.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176740515 176784874 - MGP_NODShiLtJ_P0058522 Samhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058523.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176742474 176785003 - MGP_NODShiLtJ_P0058523 Samhd1 protein_coding protein_coding MGP_NODShiLtJ_T0058524.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176742808 176754888 - Samhd1 protein_coding retained_intron MGP_NODShiLtJ_T0058525.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176745657 176784987 - MGP_NODShiLtJ_P0058525 Samhd1 protein_coding protein_coding MGP_NODShiLtJ_T0058526.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176753555 176754887 - Samhd1 protein_coding retained_intron MGP_NODShiLtJ_T0058527.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176766599 176784718 - Samhd1 protein_coding retained_intron MGP_NODShiLtJ_T0058528.1 MGP_NODShiLtJ_G0026596.1 mouse_genomes_project 2 176768882 176777093 - Samhd1 protein_coding retained_intron MGP_NODShiLtJ_T0099116.1 MGP_NODShiLtJ_G0037510.1 mouse_genomes_project 2 88445644 88445747 + Gm24461 snRNA snRNA MGP_NODShiLtJ_T0056495.1 MGP_NODShiLtJ_G0026137.1 mouse_genomes_project 2 134257059 134265557 - MGP_NODShiLtJ_P0056495 protein_coding protein_coding MGP_NODShiLtJ_T0056496.1 MGP_NODShiLtJ_G0026137.1 mouse_genomes_project 2 134260393 134265521 - protein_coding retained_intron MGP_NODShiLtJ_T0055562.1 MGP_NODShiLtJ_G0025885.1 mouse_genomes_project 2 98748468 98749407 + MGP_NODShiLtJ_P0055562 Olfr1188 protein_coding protein_coding MGP_NODShiLtJ_T0058084.1 MGP_NODShiLtJ_G0026512.1 mouse_genomes_project 2 172583106 172646675 + MGP_NODShiLtJ_P0058084 Asxl1 protein_coding protein_coding MGP_NODShiLtJ_T0058085.1 MGP_NODShiLtJ_G0026512.1 mouse_genomes_project 2 172583595 172643386 + MGP_NODShiLtJ_P0058085 Asxl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058086.1 MGP_NODShiLtJ_G0026512.1 mouse_genomes_project 2 172584932 172596584 + Asxl1 protein_coding processed_transcript MGP_NODShiLtJ_T0058087.1 MGP_NODShiLtJ_G0026512.1 mouse_genomes_project 2 172585060 172632913 + Asxl1 protein_coding processed_transcript MGP_NODShiLtJ_T0058088.1 MGP_NODShiLtJ_G0026512.1 mouse_genomes_project 2 172634178 172638144 + Asxl1 protein_coding retained_intron MGP_NODShiLtJ_T0013717.1 MGP_NODShiLtJ_G0011825.1 mouse_genomes_project 2 175963121 175963603 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055433.1 MGP_NODShiLtJ_G0025769.1 mouse_genomes_project 2 94747154 94748090 - MGP_NODShiLtJ_P0055433 Olfr1012 protein_coding protein_coding MGP_NODShiLtJ_T0055501.1 MGP_NODShiLtJ_G0025836.1 mouse_genomes_project 2 97172377 97173358 + MGP_NODShiLtJ_P0055501 Olfr1122 protein_coding protein_coding MGP_NODShiLtJ_T0053171.1 MGP_NODShiLtJ_G0025347.1 mouse_genomes_project 2 26844435 26874497 + MGP_NODShiLtJ_P0053171 Adamtsl2 protein_coding protein_coding MGP_NODShiLtJ_T0053172.1 MGP_NODShiLtJ_G0025347.1 mouse_genomes_project 2 26862803 26874491 + Adamtsl2 protein_coding retained_intron MGP_NODShiLtJ_T0053173.1 MGP_NODShiLtJ_G0025347.1 mouse_genomes_project 2 26863551 26864162 + Adamtsl2 protein_coding processed_transcript MGP_NODShiLtJ_T0053174.1 MGP_NODShiLtJ_G0025347.1 mouse_genomes_project 2 26869298 26872922 + Adamtsl2 protein_coding retained_intron MGP_NODShiLtJ_T0053175.1 MGP_NODShiLtJ_G0025347.1 mouse_genomes_project 2 26870174 26874497 + Adamtsl2 protein_coding retained_intron MGP_NODShiLtJ_T0052578.1 MGP_NODShiLtJ_G0025239.1 mouse_genomes_project 2 23455402 23505709 - MGP_NODShiLtJ_P0052578 Hnmt protein_coding protein_coding MGP_NODShiLtJ_T0052579.1 MGP_NODShiLtJ_G0025239.1 mouse_genomes_project 2 23455432 23505395 - MGP_NODShiLtJ_P0052579 Hnmt protein_coding protein_coding MGP_NODShiLtJ_T0052580.1 MGP_NODShiLtJ_G0025239.1 mouse_genomes_project 2 23456017 23505182 - MGP_NODShiLtJ_P0052580 Hnmt protein_coding protein_coding MGP_NODShiLtJ_T0003922.1 MGP_NODShiLtJ_G0003494.1 mouse_genomes_project 2 65650562 65684805 + Gm13571 antisense antisense MGP_NODShiLtJ_T0003923.1 MGP_NODShiLtJ_G0003494.1 mouse_genomes_project 2 65668818 65677416 + Gm13571 antisense antisense MGP_NODShiLtJ_T0003924.1 MGP_NODShiLtJ_G0003495.1 mouse_genomes_project 2 65731854 65732909 + Gm13580 antisense antisense MGP_NODShiLtJ_T0007345.1 MGP_NODShiLtJ_G0006014.1 mouse_genomes_project 2 188526013 188527511 + 9230111E07Rik lincRNA lincRNA MGP_NODShiLtJ_T0013602.1 MGP_NODShiLtJ_G0011710.1 mouse_genomes_project 2 125662275 125667625 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013440.1 MGP_NODShiLtJ_G0011548.1 mouse_genomes_project 2 64148677 64149006 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010249.1 MGP_NODShiLtJ_G0008382.1 mouse_genomes_project 2 8356065 8356137 + Mir466 miRNA miRNA MGP_NODShiLtJ_T0057064.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142117014 142118193 + Galk2 protein_coding processed_transcript MGP_NODShiLtJ_T0057065.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142117039 142243674 + MGP_NODShiLtJ_P0057065 Galk2 protein_coding protein_coding MGP_NODShiLtJ_T0057066.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142117053 142153625 + MGP_NODShiLtJ_P0057066 Galk2 protein_coding protein_coding MGP_NODShiLtJ_T0057067.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142123946 142191971 + MGP_NODShiLtJ_P0057067 Galk2 protein_coding protein_coding MGP_NODShiLtJ_T0057068.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142123946 142242962 + MGP_NODShiLtJ_P0057068 Galk2 protein_coding protein_coding MGP_NODShiLtJ_T0057069.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142124082 142173892 + Galk2 protein_coding processed_transcript MGP_NODShiLtJ_T0057070.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142124089 142156878 + MGP_NODShiLtJ_P0057070 Galk2 protein_coding protein_coding MGP_NODShiLtJ_T0057071.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142124093 142192027 + MGP_NODShiLtJ_P0057071 Galk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057072.1 MGP_NODShiLtJ_G0026252.1 mouse_genomes_project 2 142124107 142210513 + Galk2 protein_coding retained_intron MGP_NODShiLtJ_T0055605.1 MGP_NODShiLtJ_G0025926.1 mouse_genomes_project 2 99963648 99964593 - MGP_NODShiLtJ_P0055605 Olfr1241 protein_coding protein_coding MGP_NODShiLtJ_T0052092.1 MGP_NODShiLtJ_G0025158.1 mouse_genomes_project 2 2125876 2143039 - Optn protein_coding processed_transcript MGP_NODShiLtJ_T0052093.1 MGP_NODShiLtJ_G0025158.1 mouse_genomes_project 2 2125876 2174456 - MGP_NODShiLtJ_P0052093 Optn protein_coding protein_coding MGP_NODShiLtJ_T0052094.1 MGP_NODShiLtJ_G0025158.1 mouse_genomes_project 2 2125878 2174349 - MGP_NODShiLtJ_P0052094 Optn protein_coding protein_coding MGP_NODShiLtJ_T0052095.1 MGP_NODShiLtJ_G0025158.1 mouse_genomes_project 2 2126535 2144333 - Optn protein_coding processed_transcript MGP_NODShiLtJ_T0052096.1 MGP_NODShiLtJ_G0025158.1 mouse_genomes_project 2 2154423 2174462 - Optn protein_coding processed_transcript MGP_NODShiLtJ_T0055529.1 MGP_NODShiLtJ_G0025855.1 mouse_genomes_project 2 97678443 97679379 - MGP_NODShiLtJ_P0055529 Olfr1141 protein_coding protein_coding MGP_NODShiLtJ_T0100388.1 MGP_NODShiLtJ_G0038782.1 mouse_genomes_project 2 121812682 121812813 - Gm23749 snoRNA snoRNA MGP_NODShiLtJ_T0007324.1 MGP_NODShiLtJ_G0005997.1 mouse_genomes_project 2 182828129 182829204 + Gm14246 lincRNA lincRNA MGP_NODShiLtJ_T0001042.1 MGP_NODShiLtJ_G0000968.1 mouse_genomes_project 2 36260256 36263271 - TEC TEC MGP_NODShiLtJ_T0007206.1 MGP_NODShiLtJ_G0005904.1 mouse_genomes_project 2 104528753 104545813 + Gm10804 lincRNA lincRNA MGP_NODShiLtJ_T0007207.1 MGP_NODShiLtJ_G0005904.1 mouse_genomes_project 2 104528754 104532662 + Gm10804 lincRNA lincRNA MGP_NODShiLtJ_T0007208.1 MGP_NODShiLtJ_G0005904.1 mouse_genomes_project 2 104528755 104542340 + Gm10804 lincRNA lincRNA MGP_NODShiLtJ_T0007209.1 MGP_NODShiLtJ_G0005904.1 mouse_genomes_project 2 104544379 104544616 + Gm10804 lincRNA lincRNA MGP_NODShiLtJ_T0099091.1 MGP_NODShiLtJ_G0037485.1 mouse_genomes_project 2 8973450 8973583 - Gm26478 snRNA snRNA MGP_NODShiLtJ_T0099090.1 MGP_NODShiLtJ_G0037484.1 mouse_genomes_project 2 4656677 4656774 + Gm24340 snRNA snRNA MGP_NODShiLtJ_T0054001.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34539992 34761357 - MGP_NODShiLtJ_P0054001 Pbx3 protein_coding protein_coding MGP_NODShiLtJ_T0054002.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34541407 34665369 - Pbx3 protein_coding processed_transcript MGP_NODShiLtJ_T0054003.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34541415 34761357 - MGP_NODShiLtJ_P0054003 Pbx3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054004.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34541415 34761357 - MGP_NODShiLtJ_P0054004 Pbx3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054005.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34545393 34760283 - MGP_NODShiLtJ_P0054005 Pbx3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054006.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34581924 34762572 - MGP_NODShiLtJ_P0054006 Pbx3 protein_coding protein_coding MGP_NODShiLtJ_T0054007.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34592918 34760690 - MGP_NODShiLtJ_P0054007 Pbx3 protein_coding protein_coding MGP_NODShiLtJ_T0054008.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34593045 34760587 - MGP_NODShiLtJ_P0054008 Pbx3 protein_coding protein_coding MGP_NODShiLtJ_T0054009.1 MGP_NODShiLtJ_G0025475.1 mouse_genomes_project 2 34757548 34761229 - Pbx3 protein_coding retained_intron MGP_NODShiLtJ_T0100413.1 MGP_NODShiLtJ_G0038807.1 mouse_genomes_project 2 175184735 175184868 - Gm22334 snoRNA snoRNA MGP_NODShiLtJ_T0055117.1 MGP_NODShiLtJ_G0025697.1 mouse_genomes_project 2 83387982 83391203 - MGP_NODShiLtJ_P0055117 Ttc30a2 protein_coding protein_coding MGP_NODShiLtJ_T0100379.1 MGP_NODShiLtJ_G0038773.1 mouse_genomes_project 2 102510533 102510644 + Snord67 snoRNA snoRNA MGP_NODShiLtJ_T0099115.1 MGP_NODShiLtJ_G0037509.1 mouse_genomes_project 2 87054418 87054520 + Gm22606 snRNA snRNA MGP_NODShiLtJ_T0055051.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81011885 81117796 - MGP_NODShiLtJ_P0055051 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055052.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81011885 81117771 - MGP_NODShiLtJ_P0055052 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055053.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81011885 81117788 - MGP_NODShiLtJ_P0055053 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055054.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81011885 81117693 - MGP_NODShiLtJ_P0055054 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055055.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81011885 81117769 - MGP_NODShiLtJ_P0055055 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055056.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81011896 81117785 - Atf2 protein_coding processed_transcript MGP_NODShiLtJ_T0055057.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81011900 81074981 - MGP_NODShiLtJ_P0055057 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055058.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81013642 81117712 - MGP_NODShiLtJ_P0055058 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055059.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81014198 81074929 - MGP_NODShiLtJ_P0055059 Atf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055060.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81014298 81074907 - MGP_NODShiLtJ_P0055060 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055061.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81028177 81117770 - Atf2 protein_coding processed_transcript MGP_NODShiLtJ_T0055062.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81032553 81117687 - MGP_NODShiLtJ_P0055062 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055063.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81048084 81117785 - Atf2 protein_coding processed_transcript MGP_NODShiLtJ_T0055064.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81048654 81117750 - MGP_NODShiLtJ_P0055064 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055065.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81048655 81117710 - MGP_NODShiLtJ_P0055065 Atf2 protein_coding protein_coding MGP_NODShiLtJ_T0055066.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81048949 81054867 - Atf2 protein_coding processed_transcript MGP_NODShiLtJ_T0055067.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81074566 81117751 - Atf2 protein_coding processed_transcript MGP_NODShiLtJ_T0055068.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81074659 81117785 - Atf2 protein_coding processed_transcript MGP_NODShiLtJ_T0055069.1 MGP_NODShiLtJ_G0025678.1 mouse_genomes_project 2 81087173 81117707 - Atf2 protein_coding processed_transcript MGP_NODShiLtJ_T0054155.1 MGP_NODShiLtJ_G0025496.1 mouse_genomes_project 2 36549835 36563835 - MGP_NODShiLtJ_P0054155 Ndufa8 protein_coding protein_coding MGP_NODShiLtJ_T0017647.1 MGP_NODShiLtJ_G0015302.1 mouse_genomes_project 2 85426791 85428506 - Gm13727 processed_transcript processed_transcript MGP_NODShiLtJ_T0001014.1 MGP_NODShiLtJ_G0000940.1 mouse_genomes_project 2 11112285 11114886 + TEC TEC MGP_NODShiLtJ_T0101802.1 MGP_NODShiLtJ_G0039970.1 mouse_genomes_project 2 94572446 94573391 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0054879.1 MGP_NODShiLtJ_G0025645.1 mouse_genomes_project 2 76894591 77308634 + MGP_NODShiLtJ_P0054879 Myo3b protein_coding protein_coding MGP_NODShiLtJ_T0054880.1 MGP_NODShiLtJ_G0025645.1 mouse_genomes_project 2 76943259 77308637 + MGP_NODShiLtJ_P0054880 Myo3b protein_coding protein_coding MGP_NODShiLtJ_T0054881.1 MGP_NODShiLtJ_G0025645.1 mouse_genomes_project 2 76959916 77051496 + MGP_NODShiLtJ_P0054881 Myo3b protein_coding protein_coding MGP_NODShiLtJ_T0056022.1 MGP_NODShiLtJ_G0026009.1 mouse_genomes_project 2 105452298 105561208 - MGP_NODShiLtJ_P0056022 Ttc17 protein_coding protein_coding MGP_NODShiLtJ_T0056023.1 MGP_NODShiLtJ_G0026009.1 mouse_genomes_project 2 105452300 105561193 - MGP_NODShiLtJ_P0056023 Ttc17 protein_coding protein_coding MGP_NODShiLtJ_T0056024.1 MGP_NODShiLtJ_G0026009.1 mouse_genomes_project 2 105479206 105561202 - MGP_NODShiLtJ_P0056024 Ttc17 protein_coding protein_coding MGP_NODShiLtJ_T0056025.1 MGP_NODShiLtJ_G0026009.1 mouse_genomes_project 2 105505802 105515705 - Ttc17 protein_coding processed_transcript MGP_NODShiLtJ_T0056026.1 MGP_NODShiLtJ_G0026009.1 mouse_genomes_project 2 105532355 105559515 - Ttc17 protein_coding processed_transcript MGP_NODShiLtJ_T0054212.1 MGP_NODShiLtJ_G0025530.1 mouse_genomes_project 2 38082981 38145211 - MGP_NODShiLtJ_P0054212 Rc3h2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054213.1 MGP_NODShiLtJ_G0025530.1 mouse_genomes_project 2 38085839 38145338 - MGP_NODShiLtJ_P0054213 Rc3h2 protein_coding protein_coding MGP_NODShiLtJ_T0054214.1 MGP_NODShiLtJ_G0025530.1 mouse_genomes_project 2 38087466 38088178 - Rc3h2 protein_coding retained_intron MGP_NODShiLtJ_T0054215.1 MGP_NODShiLtJ_G0025530.1 mouse_genomes_project 2 38089757 38093212 - Rc3h2 protein_coding retained_intron MGP_NODShiLtJ_T0054216.1 MGP_NODShiLtJ_G0025530.1 mouse_genomes_project 2 38102622 38104858 - Rc3h2 protein_coding retained_intron MGP_NODShiLtJ_T0054217.1 MGP_NODShiLtJ_G0025530.1 mouse_genomes_project 2 38111384 38117241 - Rc3h2 protein_coding retained_intron MGP_NODShiLtJ_T0054218.1 MGP_NODShiLtJ_G0025530.1 mouse_genomes_project 2 38127365 38132533 - Rc3h2 protein_coding processed_transcript MGP_NODShiLtJ_T0054219.1 MGP_NODShiLtJ_G0025530.1 mouse_genomes_project 2 38131329 38134808 - Rc3h2 protein_coding retained_intron MGP_NODShiLtJ_T0010352.1 MGP_NODShiLtJ_G0008485.1 mouse_genomes_project 2 144316007 144316133 + Gm22411 miRNA miRNA MGP_NODShiLtJ_T0003956.1 MGP_NODShiLtJ_G0003517.1 mouse_genomes_project 2 80522544 80530633 + Gm13703 antisense antisense MGP_NODShiLtJ_T0056898.1 MGP_NODShiLtJ_G0026209.1 mouse_genomes_project 2 137158939 137179469 - MGP_NODShiLtJ_P0056898 Serinc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056906.1 MGP_NODShiLtJ_G0026209.1 mouse_genomes_project 2 137172326 137180420 - MGP_NODShiLtJ_P0056906 Serinc4 protein_coding protein_coding MGP_NODShiLtJ_T0056907.1 MGP_NODShiLtJ_G0026209.1 mouse_genomes_project 2 137172326 137180332 - MGP_NODShiLtJ_P0056907 Serinc4 protein_coding protein_coding MGP_NODShiLtJ_T0056908.1 MGP_NODShiLtJ_G0026209.1 mouse_genomes_project 2 137172338 137179469 - MGP_NODShiLtJ_P0056908 Serinc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056909.1 MGP_NODShiLtJ_G0026209.1 mouse_genomes_project 2 137172396 137179463 - MGP_NODShiLtJ_P0056909 Serinc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056910.1 MGP_NODShiLtJ_G0026209.1 mouse_genomes_project 2 137174443 137176043 - Serinc4 protein_coding retained_intron MGP_NODShiLtJ_T0054777.1 MGP_NODShiLtJ_G0025624.1 mouse_genomes_project 2 74089803 74371944 + B3galt1 protein_coding processed_transcript MGP_NODShiLtJ_T0054778.1 MGP_NODShiLtJ_G0025624.1 mouse_genomes_project 2 74302367 74718444 + MGP_NODShiLtJ_P0054778 B3galt1 protein_coding protein_coding MGP_NODShiLtJ_T0054779.1 MGP_NODShiLtJ_G0025624.1 mouse_genomes_project 2 74706320 74720808 + MGP_NODShiLtJ_P0054779 B3galt1 protein_coding protein_coding MGP_NODShiLtJ_T0054780.1 MGP_NODShiLtJ_G0025624.1 mouse_genomes_project 2 74718006 74722982 + MGP_NODShiLtJ_P0054780 B3galt1 protein_coding protein_coding MGP_NODShiLtJ_T0004104.1 MGP_NODShiLtJ_G0003623.1 mouse_genomes_project 2 184452910 184471908 + A730032A03Rik antisense antisense MGP_NODShiLtJ_T0004105.1 MGP_NODShiLtJ_G0003623.1 mouse_genomes_project 2 184468109 184471908 + A730032A03Rik antisense antisense MGP_NODShiLtJ_T0013693.1 MGP_NODShiLtJ_G0011801.1 mouse_genomes_project 2 168130445 168132163 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056392.1 MGP_NODShiLtJ_G0026113.1 mouse_genomes_project 2 128658791 128673335 - MGP_NODShiLtJ_P0056392 Grem1 protein_coding protein_coding MGP_NODShiLtJ_T0017633.1 MGP_NODShiLtJ_G0015291.1 mouse_genomes_project 2 62311133 62313415 - A930012O16Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017634.1 MGP_NODShiLtJ_G0015291.1 mouse_genomes_project 2 62311133 62313415 - A930012O16Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0010305.1 MGP_NODShiLtJ_G0008438.1 mouse_genomes_project 2 39036524 39036606 - Gm44455 miRNA miRNA MGP_NODShiLtJ_T0017678.1 MGP_NODShiLtJ_G0015319.1 mouse_genomes_project 2 120130870 120131345 - BB218582 processed_transcript processed_transcript MGP_NODShiLtJ_T0017679.1 MGP_NODShiLtJ_G0015319.1 mouse_genomes_project 2 120130873 120138323 - BB218582 processed_transcript processed_transcript MGP_NODShiLtJ_T0017680.1 MGP_NODShiLtJ_G0015319.1 mouse_genomes_project 2 120135166 120138293 - BB218582 processed_transcript processed_transcript MGP_NODShiLtJ_T0013358.1 MGP_NODShiLtJ_G0011466.1 mouse_genomes_project 2 28737525 28737649 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007231.1 MGP_NODShiLtJ_G0005922.1 mouse_genomes_project 2 123018776 123020511 + lincRNA lincRNA MGP_NODShiLtJ_T0013729.1 MGP_NODShiLtJ_G0011837.1 mouse_genomes_project 2 178246479 178246671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013590.1 MGP_NODShiLtJ_G0011698.1 mouse_genomes_project 2 120422503 120422971 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007140.1 MGP_NODShiLtJ_G0005847.1 mouse_genomes_project 2 53425660 53432633 - Gm13480 lincRNA lincRNA MGP_NODShiLtJ_T0054197.1 MGP_NODShiLtJ_G0025519.1 mouse_genomes_project 2 37582114 37583047 - MGP_NODShiLtJ_P0054197 Olfr355 protein_coding protein_coding MGP_NODShiLtJ_T0059410.1 MGP_NODShiLtJ_G0026809.1 mouse_genomes_project 2 201843386 201852951 - MGP_NODShiLtJ_P0059410 Gata5 protein_coding protein_coding MGP_NODShiLtJ_T0013628.1 MGP_NODShiLtJ_G0011736.1 mouse_genomes_project 2 137483348 137484027 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052938.1 MGP_NODShiLtJ_G0025307.1 mouse_genomes_project 2 25460399 25462930 + MGP_NODShiLtJ_P0052938 Lcn3 protein_coding protein_coding MGP_NODShiLtJ_T0099096.1 MGP_NODShiLtJ_G0037490.1 mouse_genomes_project 2 24846591 24846696 + Gm22572 snRNA snRNA MGP_NODShiLtJ_T0057205.1 MGP_NODShiLtJ_G0026284.1 mouse_genomes_project 2 144160667 144213646 - MGP_NODShiLtJ_P0057205 Nphp1 protein_coding protein_coding MGP_NODShiLtJ_T0057206.1 MGP_NODShiLtJ_G0026284.1 mouse_genomes_project 2 144160669 144164461 - Nphp1 protein_coding processed_transcript MGP_NODShiLtJ_T0057207.1 MGP_NODShiLtJ_G0026284.1 mouse_genomes_project 2 144160671 144213689 - MGP_NODShiLtJ_P0057207 Nphp1 protein_coding protein_coding MGP_NODShiLtJ_T0057208.1 MGP_NODShiLtJ_G0026284.1 mouse_genomes_project 2 144165536 144174775 - Nphp1 protein_coding retained_intron MGP_NODShiLtJ_T0055376.1 MGP_NODShiLtJ_G0025747.1 mouse_genomes_project 2 93626885 93638340 - MGP_NODShiLtJ_P0055376 Smtnl1 protein_coding protein_coding MGP_NODShiLtJ_T0057569.1 MGP_NODShiLtJ_G0026369.1 mouse_genomes_project 2 151494080 151557962 - MGP_NODShiLtJ_P0057569 Hao1 protein_coding protein_coding MGP_NODShiLtJ_T0057570.1 MGP_NODShiLtJ_G0026369.1 mouse_genomes_project 2 151528757 151557901 - Hao1 protein_coding processed_transcript MGP_NODShiLtJ_T0052923.1 MGP_NODShiLtJ_G0025299.1 mouse_genomes_project 2 25303437 25306801 - MGP_NODShiLtJ_P0052923 Fcna protein_coding protein_coding MGP_NODShiLtJ_T0052924.1 MGP_NODShiLtJ_G0025299.1 mouse_genomes_project 2 25303736 25306056 - Fcna protein_coding processed_transcript MGP_NODShiLtJ_T0056670.1 MGP_NODShiLtJ_G0026177.1 mouse_genomes_project 2 135784722 135810579 - Pla2g4e protein_coding retained_intron MGP_NODShiLtJ_T0056671.1 MGP_NODShiLtJ_G0026177.1 mouse_genomes_project 2 135784722 135866401 - MGP_NODShiLtJ_P0056671 Pla2g4e protein_coding protein_coding MGP_NODShiLtJ_T0056672.1 MGP_NODShiLtJ_G0026177.1 mouse_genomes_project 2 135790490 135866154 - Pla2g4e protein_coding retained_intron MGP_NODShiLtJ_T0056673.1 MGP_NODShiLtJ_G0026177.1 mouse_genomes_project 2 135808753 135866180 - Pla2g4e protein_coding processed_transcript MGP_NODShiLtJ_T0003942.1 MGP_NODShiLtJ_G0003510.1 mouse_genomes_project 2 76717541 76719954 + Mettl5os antisense antisense MGP_NODShiLtJ_T0100377.1 MGP_NODShiLtJ_G0038771.1 mouse_genomes_project 2 88751068 88751199 + Gm22652 snoRNA snoRNA MGP_NODShiLtJ_T0057951.1 MGP_NODShiLtJ_G0026468.1 mouse_genomes_project 2 171107598 171120321 + MGP_NODShiLtJ_P0057951 Slc52a3 protein_coding protein_coding MGP_NODShiLtJ_T0057952.1 MGP_NODShiLtJ_G0026468.1 mouse_genomes_project 2 171107622 171120322 + MGP_NODShiLtJ_P0057952 Slc52a3 protein_coding protein_coding MGP_NODShiLtJ_T0057953.1 MGP_NODShiLtJ_G0026468.1 mouse_genomes_project 2 171110925 171120286 + MGP_NODShiLtJ_P0057953 Slc52a3 protein_coding protein_coding MGP_NODShiLtJ_T0057954.1 MGP_NODShiLtJ_G0026468.1 mouse_genomes_project 2 171110957 171120310 + MGP_NODShiLtJ_P0057954 Slc52a3 protein_coding protein_coding MGP_NODShiLtJ_T0058200.1 MGP_NODShiLtJ_G0026546.1 mouse_genomes_project 2 174242686 174526328 + MGP_NODShiLtJ_P0058200 a protein_coding protein_coding MGP_NODShiLtJ_T0058207.1 MGP_NODShiLtJ_G0026546.1 mouse_genomes_project 2 174429428 174524260 + a protein_coding processed_transcript MGP_NODShiLtJ_T0058208.1 MGP_NODShiLtJ_G0026546.1 mouse_genomes_project 2 174429467 174529612 + MGP_NODShiLtJ_P0058208 a protein_coding protein_coding MGP_NODShiLtJ_T0058209.1 MGP_NODShiLtJ_G0026546.1 mouse_genomes_project 2 174506611 174529233 + MGP_NODShiLtJ_P0058209 a protein_coding protein_coding MGP_NODShiLtJ_T0058210.1 MGP_NODShiLtJ_G0026546.1 mouse_genomes_project 2 174506670 174529613 + MGP_NODShiLtJ_P0058210 a protein_coding protein_coding MGP_NODShiLtJ_T0058211.1 MGP_NODShiLtJ_G0026546.1 mouse_genomes_project 2 174526215 174529612 + a protein_coding retained_intron MGP_NODShiLtJ_T0055706.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902406 101907840 + MGP_NODShiLtJ_P0055706 Psmc3 protein_coding protein_coding MGP_NODShiLtJ_T0055707.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902452 101914767 + MGP_NODShiLtJ_P0055707 Psmc3 protein_coding protein_coding MGP_NODShiLtJ_T0055708.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902492 101904333 + Psmc3 protein_coding processed_transcript MGP_NODShiLtJ_T0055709.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902497 101907840 + MGP_NODShiLtJ_P0055709 Psmc3 protein_coding protein_coding MGP_NODShiLtJ_T0055710.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902675 101906243 + MGP_NODShiLtJ_P0055710 Psmc3 protein_coding protein_coding MGP_NODShiLtJ_T0055711.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902698 101905394 + MGP_NODShiLtJ_P0055711 Psmc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055712.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902779 101904116 + Psmc3 protein_coding processed_transcript MGP_NODShiLtJ_T0055713.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902875 101903951 + Psmc3 protein_coding processed_transcript MGP_NODShiLtJ_T0055714.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101902970 101904326 + Psmc3 protein_coding processed_transcript MGP_NODShiLtJ_T0055715.1 MGP_NODShiLtJ_G0025963.1 mouse_genomes_project 2 101906506 101907842 + Psmc3 protein_coding processed_transcript MGP_NODShiLtJ_T0057299.1 MGP_NODShiLtJ_G0026309.1 mouse_genomes_project 2 146317702 146346513 + MGP_NODShiLtJ_P0057299 Stk35 protein_coding protein_coding MGP_NODShiLtJ_T0057300.1 MGP_NODShiLtJ_G0026309.1 mouse_genomes_project 2 146317702 146349828 + MGP_NODShiLtJ_P0057300 Stk35 protein_coding protein_coding MGP_NODShiLtJ_T0058876.1 MGP_NODShiLtJ_G0026691.1 mouse_genomes_project 2 185142298 185148954 + MGP_NODShiLtJ_P0058876 Snx21 protein_coding protein_coding MGP_NODShiLtJ_T0058877.1 MGP_NODShiLtJ_G0026691.1 mouse_genomes_project 2 185142466 185150277 + MGP_NODShiLtJ_P0058877 Snx21 protein_coding protein_coding MGP_NODShiLtJ_T0058878.1 MGP_NODShiLtJ_G0026691.1 mouse_genomes_project 2 185142466 185149519 + MGP_NODShiLtJ_P0058878 Snx21 protein_coding protein_coding MGP_NODShiLtJ_T0058879.1 MGP_NODShiLtJ_G0026691.1 mouse_genomes_project 2 185142492 185144108 + MGP_NODShiLtJ_P0058879 Snx21 protein_coding protein_coding MGP_NODShiLtJ_T0058880.1 MGP_NODShiLtJ_G0026691.1 mouse_genomes_project 2 185143269 185149091 + MGP_NODShiLtJ_P0058880 Snx21 protein_coding protein_coding MGP_NODShiLtJ_T0058881.1 MGP_NODShiLtJ_G0026691.1 mouse_genomes_project 2 185146877 185150283 + Snx21 protein_coding retained_intron MGP_NODShiLtJ_T0058882.1 MGP_NODShiLtJ_G0026691.1 mouse_genomes_project 2 185148118 185150275 + Snx21 protein_coding processed_transcript MGP_NODShiLtJ_T0058135.1 MGP_NODShiLtJ_G0026527.1 mouse_genomes_project 2 173515748 173523128 + MGP_NODShiLtJ_P0058135 Bpifa1 protein_coding protein_coding MGP_NODShiLtJ_T0058136.1 MGP_NODShiLtJ_G0026527.1 mouse_genomes_project 2 173515767 173518020 + Bpifa1 protein_coding processed_transcript MGP_NODShiLtJ_T0058137.1 MGP_NODShiLtJ_G0026527.1 mouse_genomes_project 2 173517193 173520591 + Bpifa1 protein_coding processed_transcript MGP_NODShiLtJ_T0100400.1 MGP_NODShiLtJ_G0038794.1 mouse_genomes_project 2 146824636 146824706 + Gm23650 snoRNA snoRNA MGP_NODShiLtJ_T0057875.1 MGP_NODShiLtJ_G0026451.1 mouse_genomes_project 2 169736820 169781497 + MGP_NODShiLtJ_P0057875 Pygb protein_coding protein_coding MGP_NODShiLtJ_T0057876.1 MGP_NODShiLtJ_G0026451.1 mouse_genomes_project 2 169739076 169764423 + Pygb protein_coding processed_transcript MGP_NODShiLtJ_T0057877.1 MGP_NODShiLtJ_G0026451.1 mouse_genomes_project 2 169765748 169768175 + Pygb protein_coding retained_intron MGP_NODShiLtJ_T0057878.1 MGP_NODShiLtJ_G0026451.1 mouse_genomes_project 2 169773360 169778201 + Pygb protein_coding retained_intron MGP_NODShiLtJ_T0057879.1 MGP_NODShiLtJ_G0026451.1 mouse_genomes_project 2 169778115 169780375 + Pygb protein_coding retained_intron MGP_NODShiLtJ_T0013287.1 MGP_NODShiLtJ_G0011395.1 mouse_genomes_project 2 684347 685416 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056373.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127434817 127456177 - Ryr3 protein_coding processed_transcript MGP_NODShiLtJ_T0056374.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127434826 128063987 - MGP_NODShiLtJ_P0056374 Ryr3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056375.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127434842 127854060 - MGP_NODShiLtJ_P0056375 Ryr3 protein_coding protein_coding MGP_NODShiLtJ_T0056376.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127434842 128064048 - MGP_NODShiLtJ_P0056376 Ryr3 protein_coding protein_coding MGP_NODShiLtJ_T0056377.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127435508 128064065 - Ryr3 protein_coding processed_transcript MGP_NODShiLtJ_T0056378.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127440038 127443974 - Ryr3 protein_coding processed_transcript MGP_NODShiLtJ_T0056379.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127675002 127721005 - Ryr3 protein_coding retained_intron MGP_NODShiLtJ_T0056380.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127786085 128064059 - Ryr3 protein_coding retained_intron MGP_NODShiLtJ_T0056381.1 MGP_NODShiLtJ_G0026110.1 mouse_genomes_project 2 127817731 128064090 - Ryr3 protein_coding retained_intron MGP_NODShiLtJ_T0013765.1 MGP_NODShiLtJ_G0011873.1 mouse_genomes_project 2 202874345 202874984 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053395.1 MGP_NODShiLtJ_G0025386.1 mouse_genomes_project 2 29951602 29984785 + MGP_NODShiLtJ_P0053395 Gle1 protein_coding protein_coding MGP_NODShiLtJ_T0053396.1 MGP_NODShiLtJ_G0025386.1 mouse_genomes_project 2 29951604 29955498 + Gle1 protein_coding retained_intron MGP_NODShiLtJ_T0053397.1 MGP_NODShiLtJ_G0025386.1 mouse_genomes_project 2 29951699 29956038 + Gle1 protein_coding retained_intron MGP_NODShiLtJ_T0053398.1 MGP_NODShiLtJ_G0025386.1 mouse_genomes_project 2 29958791 29960217 + Gle1 protein_coding retained_intron MGP_NODShiLtJ_T0053399.1 MGP_NODShiLtJ_G0025386.1 mouse_genomes_project 2 29959154 29961194 + Gle1 protein_coding retained_intron MGP_NODShiLtJ_T0053400.1 MGP_NODShiLtJ_G0025386.1 mouse_genomes_project 2 29965370 29967417 + Gle1 protein_coding retained_intron MGP_NODShiLtJ_T0053401.1 MGP_NODShiLtJ_G0025386.1 mouse_genomes_project 2 29979925 29982631 + Gle1 protein_coding retained_intron MGP_NODShiLtJ_T0007212.1 MGP_NODShiLtJ_G0005906.1 mouse_genomes_project 2 105905010 105906736 - Gm13793 lincRNA lincRNA MGP_NODShiLtJ_T0010258.1 MGP_NODShiLtJ_G0008391.1 mouse_genomes_project 2 8360286 8360383 + Gm26092 miRNA miRNA MGP_NODShiLtJ_T0058652.1 MGP_NODShiLtJ_G0026622.1 mouse_genomes_project 2 180237728 180239957 - MGP_NODShiLtJ_P0058652 Gm826 protein_coding protein_coding MGP_NODShiLtJ_T0058653.1 MGP_NODShiLtJ_G0026622.1 mouse_genomes_project 2 180238079 180262397 - Gm826 protein_coding processed_transcript MGP_NODShiLtJ_T0058654.1 MGP_NODShiLtJ_G0026622.1 mouse_genomes_project 2 180238196 180255701 - MGP_NODShiLtJ_P0058654 Gm826 protein_coding protein_coding MGP_NODShiLtJ_T0013513.1 MGP_NODShiLtJ_G0011621.1 mouse_genomes_project 2 91101284 91101624 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017744.1 MGP_NODShiLtJ_G0015350.1 mouse_genomes_project 2 176307374 176315161 - 4930405A21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017745.1 MGP_NODShiLtJ_G0015350.1 mouse_genomes_project 2 176308786 176315078 - 4930405A21Rik processed_transcript retained_intron MGP_NODShiLtJ_T0004106.1 MGP_NODShiLtJ_G0003624.1 mouse_genomes_project 2 184758486 184759417 - Gm14302 antisense antisense MGP_NODShiLtJ_T0017776.1 MGP_NODShiLtJ_G0015364.1 mouse_genomes_project 2 194270869 194271322 - Gm20490 processed_transcript processed_transcript MGP_NODShiLtJ_T0057914.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170620347 170638604 + Fkbp1a protein_coding processed_transcript MGP_NODShiLtJ_T0057915.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170620356 170637396 + Fkbp1a protein_coding processed_transcript MGP_NODShiLtJ_T0057916.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170620356 170622422 + Fkbp1a protein_coding retained_intron MGP_NODShiLtJ_T0057917.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170620377 170637604 + Fkbp1a protein_coding retained_intron MGP_NODShiLtJ_T0057918.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170620383 170638718 + Fkbp1a protein_coding processed_transcript MGP_NODShiLtJ_T0057919.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170620458 170635238 + Fkbp1a protein_coding processed_transcript MGP_NODShiLtJ_T0057920.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170620461 170639465 + MGP_NODShiLtJ_P0057920 Fkbp1a protein_coding protein_coding MGP_NODShiLtJ_T0057921.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170620490 170638429 + Fkbp1a protein_coding processed_transcript MGP_NODShiLtJ_T0057922.1 MGP_NODShiLtJ_G0026459.1 mouse_genomes_project 2 170623154 170638489 + Fkbp1a protein_coding processed_transcript MGP_NODShiLtJ_T0057460.1 MGP_NODShiLtJ_G0026345.1 mouse_genomes_project 2 147879411 147894392 + MGP_NODShiLtJ_P0057460 Mavs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057461.1 MGP_NODShiLtJ_G0026345.1 mouse_genomes_project 2 147879415 147894395 + MGP_NODShiLtJ_P0057461 Mavs protein_coding protein_coding MGP_NODShiLtJ_T0057462.1 MGP_NODShiLtJ_G0026345.1 mouse_genomes_project 2 147879453 147894395 + MGP_NODShiLtJ_P0057462 Mavs protein_coding protein_coding MGP_NODShiLtJ_T0057463.1 MGP_NODShiLtJ_G0026345.1 mouse_genomes_project 2 147888308 147892035 + Mavs protein_coding processed_transcript MGP_NODShiLtJ_T0013667.1 MGP_NODShiLtJ_G0011775.1 mouse_genomes_project 2 157807128 157807509 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007331.1 MGP_NODShiLtJ_G0006004.1 mouse_genomes_project 2 186492733 186504348 - Gm11464 lincRNA lincRNA MGP_NODShiLtJ_T0055421.1 MGP_NODShiLtJ_G0025758.1 mouse_genomes_project 2 93983057 94016810 - MGP_NODShiLtJ_P0055421 Lrrc55 protein_coding protein_coding MGP_NODShiLtJ_T0055422.1 MGP_NODShiLtJ_G0025758.1 mouse_genomes_project 2 94008189 94016810 - MGP_NODShiLtJ_P0055422 Lrrc55 protein_coding protein_coding MGP_NODShiLtJ_T0013550.1 MGP_NODShiLtJ_G0011658.1 mouse_genomes_project 2 103301340 103302030 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017743.1 MGP_NODShiLtJ_G0015349.1 mouse_genomes_project 2 176197466 176201656 - Gm14169 processed_transcript processed_transcript MGP_NODShiLtJ_T0056160.1 MGP_NODShiLtJ_G0026034.1 mouse_genomes_project 2 117226205 117260920 + MGP_NODShiLtJ_P0056160 Fbxo3 protein_coding protein_coding MGP_NODShiLtJ_T0056161.1 MGP_NODShiLtJ_G0026034.1 mouse_genomes_project 2 117226328 117255203 + MGP_NODShiLtJ_P0056161 Fbxo3 protein_coding protein_coding MGP_NODShiLtJ_T0056162.1 MGP_NODShiLtJ_G0026034.1 mouse_genomes_project 2 117226330 117260683 + MGP_NODShiLtJ_P0056162 Fbxo3 protein_coding protein_coding MGP_NODShiLtJ_T0056163.1 MGP_NODShiLtJ_G0026034.1 mouse_genomes_project 2 117226332 117255170 + Fbxo3 protein_coding processed_transcript MGP_NODShiLtJ_T0056164.1 MGP_NODShiLtJ_G0026034.1 mouse_genomes_project 2 117226344 117255184 + MGP_NODShiLtJ_P0056164 Fbxo3 protein_coding protein_coding MGP_NODShiLtJ_T0056165.1 MGP_NODShiLtJ_G0026034.1 mouse_genomes_project 2 117226347 117253695 + MGP_NODShiLtJ_P0056165 Fbxo3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058107.1 MGP_NODShiLtJ_G0026517.1 mouse_genomes_project 2 173030658 173066552 + MGP_NODShiLtJ_P0058107 Mapre1 protein_coding protein_coding MGP_NODShiLtJ_T0058108.1 MGP_NODShiLtJ_G0026517.1 mouse_genomes_project 2 173030986 173050894 + Mapre1 protein_coding processed_transcript MGP_NODShiLtJ_T0058109.1 MGP_NODShiLtJ_G0026517.1 mouse_genomes_project 2 173034771 173048871 + Mapre1 protein_coding processed_transcript MGP_NODShiLtJ_T0099098.1 MGP_NODShiLtJ_G0037492.1 mouse_genomes_project 2 27335690 27335816 - Gm25541 snRNA snRNA MGP_NODShiLtJ_T0057160.1 MGP_NODShiLtJ_G0026272.1 mouse_genomes_project 2 143666353 143681104 + Stard7 protein_coding processed_transcript MGP_NODShiLtJ_T0057161.1 MGP_NODShiLtJ_G0026272.1 mouse_genomes_project 2 143666717 143696183 + MGP_NODShiLtJ_P0057161 Stard7 protein_coding protein_coding MGP_NODShiLtJ_T0057162.1 MGP_NODShiLtJ_G0026272.1 mouse_genomes_project 2 143666839 143696176 + MGP_NODShiLtJ_P0057162 Stard7 protein_coding protein_coding MGP_NODShiLtJ_T0057163.1 MGP_NODShiLtJ_G0026272.1 mouse_genomes_project 2 143680753 143693086 + Stard7 protein_coding retained_intron MGP_NODShiLtJ_T0057164.1 MGP_NODShiLtJ_G0026272.1 mouse_genomes_project 2 143687246 143694557 + Stard7 protein_coding retained_intron MGP_NODShiLtJ_T0057165.1 MGP_NODShiLtJ_G0026272.1 mouse_genomes_project 2 143689238 143694582 + Stard7 protein_coding processed_transcript MGP_NODShiLtJ_T0057166.1 MGP_NODShiLtJ_G0026272.1 mouse_genomes_project 2 143689240 143694611 + Stard7 protein_coding processed_transcript MGP_NODShiLtJ_T0010246.1 MGP_NODShiLtJ_G0008379.1 mouse_genomes_project 2 8310908 8311007 + Mir466f-3 miRNA miRNA MGP_NODShiLtJ_T0007198.1 MGP_NODShiLtJ_G0005896.1 mouse_genomes_project 2 102104234 102105440 + A330069E16Rik lincRNA lincRNA MGP_NODShiLtJ_T0056279.1 MGP_NODShiLtJ_G0026062.1 mouse_genomes_project 2 123352035 123424213 + MGP_NODShiLtJ_P0056279 Kif18a protein_coding protein_coding MGP_NODShiLtJ_T0056280.1 MGP_NODShiLtJ_G0026062.1 mouse_genomes_project 2 123352123 123371398 + Kif18a protein_coding retained_intron MGP_NODShiLtJ_T0056281.1 MGP_NODShiLtJ_G0026062.1 mouse_genomes_project 2 123352137 123384775 + Kif18a protein_coding retained_intron MGP_NODShiLtJ_T0056282.1 MGP_NODShiLtJ_G0026062.1 mouse_genomes_project 2 123352149 123390345 + Kif18a protein_coding retained_intron MGP_NODShiLtJ_T0056283.1 MGP_NODShiLtJ_G0026062.1 mouse_genomes_project 2 123352166 123371130 + Kif18a protein_coding retained_intron MGP_NODShiLtJ_T0003985.1 MGP_NODShiLtJ_G0003537.1 mouse_genomes_project 2 115143098 115146675 + Gm13920 antisense antisense MGP_NODShiLtJ_T0058024.1 MGP_NODShiLtJ_G0026498.1 mouse_genomes_project 2 172040626 172091067 + MGP_NODShiLtJ_P0058024 Tpx2 protein_coding protein_coding MGP_NODShiLtJ_T0058025.1 MGP_NODShiLtJ_G0026498.1 mouse_genomes_project 2 172040626 172091067 + MGP_NODShiLtJ_P0058025 Tpx2 protein_coding protein_coding MGP_NODShiLtJ_T0058026.1 MGP_NODShiLtJ_G0026498.1 mouse_genomes_project 2 172040640 172090385 + MGP_NODShiLtJ_P0058026 Tpx2 protein_coding protein_coding MGP_NODShiLtJ_T0058027.1 MGP_NODShiLtJ_G0026498.1 mouse_genomes_project 2 172040657 172090385 + MGP_NODShiLtJ_P0058027 Tpx2 protein_coding protein_coding MGP_NODShiLtJ_T0058028.1 MGP_NODShiLtJ_G0026498.1 mouse_genomes_project 2 172040744 172047649 + Tpx2 protein_coding processed_transcript MGP_NODShiLtJ_T0058029.1 MGP_NODShiLtJ_G0026498.1 mouse_genomes_project 2 172064881 172076129 + Tpx2 protein_coding retained_intron MGP_NODShiLtJ_T0058030.1 MGP_NODShiLtJ_G0026498.1 mouse_genomes_project 2 172077598 172079785 + Tpx2 protein_coding retained_intron MGP_NODShiLtJ_T0100356.1 MGP_NODShiLtJ_G0038750.1 mouse_genomes_project 2 33114813 33114941 + Gm24165 snoRNA snoRNA MGP_NODShiLtJ_T0057191.1 MGP_NODShiLtJ_G0026280.1 mouse_genomes_project 2 143981669 143994162 - MGP_NODShiLtJ_P0057191 Zfp661 protein_coding protein_coding MGP_NODShiLtJ_T0057192.1 MGP_NODShiLtJ_G0026280.1 mouse_genomes_project 2 143982540 143991727 - MGP_NODShiLtJ_P0057192 Zfp661 protein_coding protein_coding MGP_NODShiLtJ_T0057193.1 MGP_NODShiLtJ_G0026280.1 mouse_genomes_project 2 143982547 143991735 - MGP_NODShiLtJ_P0057193 Zfp661 protein_coding protein_coding MGP_NODShiLtJ_T0057194.1 MGP_NODShiLtJ_G0026280.1 mouse_genomes_project 2 143983942 143988563 - MGP_NODShiLtJ_P0057194 Zfp661 protein_coding protein_coding MGP_NODShiLtJ_T0013394.1 MGP_NODShiLtJ_G0011502.1 mouse_genomes_project 2 41170253 41170620 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052019.1 MGP_NODShiLtJ_G0025147.1 mouse_genomes_project 2 428092 447306 - MGP_NODShiLtJ_P0052019 Suv39h2 protein_coding protein_coding MGP_NODShiLtJ_T0052020.1 MGP_NODShiLtJ_G0025147.1 mouse_genomes_project 2 429857 447235 - MGP_NODShiLtJ_P0052020 Suv39h2 protein_coding protein_coding MGP_NODShiLtJ_T0052021.1 MGP_NODShiLtJ_G0025147.1 mouse_genomes_project 2 429858 446694 - MGP_NODShiLtJ_P0052021 Suv39h2 protein_coding protein_coding MGP_NODShiLtJ_T0052022.1 MGP_NODShiLtJ_G0025147.1 mouse_genomes_project 2 429880 447244 - MGP_NODShiLtJ_P0052022 Suv39h2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0017584.1 MGP_NODShiLtJ_G0015262.1 mouse_genomes_project 2 8175023 8210540 - Gm13261 processed_transcript processed_transcript MGP_NODShiLtJ_T0007329.1 MGP_NODShiLtJ_G0006002.1 mouse_genomes_project 2 186061191 186061516 - Gm28163 lincRNA lincRNA MGP_NODShiLtJ_T0054064.1 MGP_NODShiLtJ_G0025482.1 mouse_genomes_project 2 35313102 35322098 + Cutal protein_coding retained_intron MGP_NODShiLtJ_T0054065.1 MGP_NODShiLtJ_G0025482.1 mouse_genomes_project 2 35313169 35331642 + MGP_NODShiLtJ_P0054065 Cutal protein_coding protein_coding MGP_NODShiLtJ_T0059049.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187521622 187562500 + Cse1l protein_coding processed_transcript MGP_NODShiLtJ_T0059050.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187521641 187564340 + MGP_NODShiLtJ_P0059050 Cse1l protein_coding protein_coding MGP_NODShiLtJ_T0059051.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187521693 187564052 + MGP_NODShiLtJ_P0059051 Cse1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059052.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187532460 187563744 + MGP_NODShiLtJ_P0059052 Cse1l protein_coding protein_coding MGP_NODShiLtJ_T0059053.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187545063 187563759 + MGP_NODShiLtJ_P0059053 Cse1l protein_coding protein_coding MGP_NODShiLtJ_T0059054.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187545098 187550005 + Cse1l protein_coding retained_intron MGP_NODShiLtJ_T0059055.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187545257 187552722 + Cse1l protein_coding retained_intron MGP_NODShiLtJ_T0059056.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187545301 187555056 + Cse1l protein_coding processed_transcript MGP_NODShiLtJ_T0059057.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187552389 187562803 + Cse1l protein_coding retained_intron MGP_NODShiLtJ_T0059058.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187552416 187559404 + MGP_NODShiLtJ_P0059058 Cse1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059059.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187554727 187559200 + Cse1l protein_coding retained_intron MGP_NODShiLtJ_T0059060.1 MGP_NODShiLtJ_G0026722.1 mouse_genomes_project 2 187558782 187559769 + Cse1l protein_coding retained_intron MGP_NODShiLtJ_T0058990.1 MGP_NODShiLtJ_G0026712.1 mouse_genomes_project 2 185826602 185909872 - MGP_NODShiLtJ_P0058990 Slc13a3 protein_coding protein_coding MGP_NODShiLtJ_T0058991.1 MGP_NODShiLtJ_G0026712.1 mouse_genomes_project 2 185826869 185909872 - MGP_NODShiLtJ_P0058991 Slc13a3 protein_coding protein_coding MGP_NODShiLtJ_T0058992.1 MGP_NODShiLtJ_G0026712.1 mouse_genomes_project 2 185828279 185830634 - Slc13a3 protein_coding retained_intron MGP_NODShiLtJ_T0058993.1 MGP_NODShiLtJ_G0026712.1 mouse_genomes_project 2 185833451 185841879 - Slc13a3 protein_coding retained_intron MGP_NODShiLtJ_T0058994.1 MGP_NODShiLtJ_G0026712.1 mouse_genomes_project 2 185879957 185909841 - Slc13a3 protein_coding retained_intron MGP_NODShiLtJ_T0056199.1 MGP_NODShiLtJ_G0026044.1 mouse_genomes_project 2 118002059 118025308 - MGP_NODShiLtJ_P0056199 Depdc7 protein_coding protein_coding MGP_NODShiLtJ_T0056200.1 MGP_NODShiLtJ_G0026044.1 mouse_genomes_project 2 118002860 118003435 - Depdc7 protein_coding retained_intron MGP_NODShiLtJ_T0056151.1 MGP_NODShiLtJ_G0026033.1 mouse_genomes_project 2 117171349 117226278 - 4931422A03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0056158.1 MGP_NODShiLtJ_G0026033.1 mouse_genomes_project 2 117197036 117226793 - MGP_NODShiLtJ_P0056158 4931422A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0056159.1 MGP_NODShiLtJ_G0026033.1 mouse_genomes_project 2 117224366 117226846 - 4931422A03Rik protein_coding retained_intron MGP_NODShiLtJ_T0057785.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164662157 164959021 - MGP_NODShiLtJ_P0057785 Ralgapa2 protein_coding protein_coding MGP_NODShiLtJ_T0057786.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164666239 164888722 - MGP_NODShiLtJ_P0057786 Ralgapa2 protein_coding protein_coding MGP_NODShiLtJ_T0057787.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164667055 164683489 - Ralgapa2 protein_coding processed_transcript MGP_NODShiLtJ_T0057788.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164670461 164958916 - MGP_NODShiLtJ_P0057788 Ralgapa2 protein_coding protein_coding MGP_NODShiLtJ_T0057789.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164680728 164827458 - MGP_NODShiLtJ_P0057789 Ralgapa2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057790.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164736005 164958916 - MGP_NODShiLtJ_P0057790 Ralgapa2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0057791.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164785507 164848866 - Ralgapa2 protein_coding retained_intron MGP_NODShiLtJ_T0057792.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164847419 164855479 - Ralgapa2 protein_coding retained_intron MGP_NODShiLtJ_T0057793.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164862666 164958928 - Ralgapa2 protein_coding retained_intron MGP_NODShiLtJ_T0057794.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164872678 164959021 - Ralgapa2 protein_coding retained_intron MGP_NODShiLtJ_T0057795.1 MGP_NODShiLtJ_G0026416.1 mouse_genomes_project 2 164927934 164959043 - Ralgapa2 protein_coding retained_intron MGP_NODShiLtJ_T0057137.1 MGP_NODShiLtJ_G0026266.1 mouse_genomes_project 2 143483079 143515578 - MGP_NODShiLtJ_P0057137 Ncaph protein_coding protein_coding MGP_NODShiLtJ_T0057138.1 MGP_NODShiLtJ_G0026266.1 mouse_genomes_project 2 143483097 143496179 - Ncaph protein_coding retained_intron MGP_NODShiLtJ_T0057139.1 MGP_NODShiLtJ_G0026266.1 mouse_genomes_project 2 143483220 143515526 - MGP_NODShiLtJ_P0057139 Ncaph protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057140.1 MGP_NODShiLtJ_G0026266.1 mouse_genomes_project 2 143487890 143498391 - Ncaph protein_coding retained_intron MGP_NODShiLtJ_T0057141.1 MGP_NODShiLtJ_G0026266.1 mouse_genomes_project 2 143502536 143503674 - Ncaph protein_coding retained_intron MGP_NODShiLtJ_T0057142.1 MGP_NODShiLtJ_G0026266.1 mouse_genomes_project 2 143509284 143515521 - Ncaph protein_coding processed_transcript MGP_NODShiLtJ_T0010344.1 MGP_NODShiLtJ_G0008477.1 mouse_genomes_project 2 132548140 132548240 + Mir674 miRNA miRNA MGP_NODShiLtJ_T0055880.1 MGP_NODShiLtJ_G0025986.1 mouse_genomes_project 2 102937150 102982732 - MGP_NODShiLtJ_P0055880 Creb3l1 protein_coding protein_coding MGP_NODShiLtJ_T0054448.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55954022 56004555 + MGP_NODShiLtJ_P0054448 Rif1 protein_coding protein_coding MGP_NODShiLtJ_T0054449.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55954027 56004557 + MGP_NODShiLtJ_P0054449 Rif1 protein_coding protein_coding MGP_NODShiLtJ_T0054450.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55954034 56008822 + MGP_NODShiLtJ_P0054450 Rif1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054451.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55954257 55957242 + Rif1 protein_coding processed_transcript MGP_NODShiLtJ_T0054452.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55970573 55988827 + Rif1 protein_coding processed_transcript MGP_NODShiLtJ_T0054453.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55974138 55979384 + Rif1 protein_coding processed_transcript MGP_NODShiLtJ_T0054454.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55992406 56004229 + Rif1 protein_coding processed_transcript MGP_NODShiLtJ_T0054455.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55992883 56004282 + Rif1 protein_coding processed_transcript MGP_NODShiLtJ_T0054456.1 MGP_NODShiLtJ_G0025568.1 mouse_genomes_project 2 55993555 56004555 + Rif1 protein_coding processed_transcript MGP_NODShiLtJ_T0004086.1 MGP_NODShiLtJ_G0003609.1 mouse_genomes_project 2 175952235 175953305 - Gm14170 antisense antisense MGP_NODShiLtJ_T0017737.1 MGP_NODShiLtJ_G0015346.1 mouse_genomes_project 2 169619280 169620719 + E130215H24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0004138.1 MGP_NODShiLtJ_G0003647.1 mouse_genomes_project 2 202515482 202527791 + Gm14341 antisense antisense MGP_NODShiLtJ_T0013736.1 MGP_NODShiLtJ_G0011844.1 mouse_genomes_project 2 182963381 182963714 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007305.1 MGP_NODShiLtJ_G0005981.1 mouse_genomes_project 2 171875694 171877652 - Gm26841 lincRNA lincRNA MGP_NODShiLtJ_T0055571.1 MGP_NODShiLtJ_G0025894.1 mouse_genomes_project 2 99041674 99045817 + MGP_NODShiLtJ_P0055571 Olfr1201 protein_coding protein_coding MGP_NODShiLtJ_T0007085.1 MGP_NODShiLtJ_G0005806.1 mouse_genomes_project 2 9295767 9299620 + lincRNA lincRNA MGP_NODShiLtJ_T0001057.1 MGP_NODShiLtJ_G0000983.1 mouse_genomes_project 2 75582347 75585564 + TEC TEC MGP_NODShiLtJ_T0010365.1 MGP_NODShiLtJ_G0008498.1 mouse_genomes_project 2 172058391 172058451 + Mir5622 miRNA miRNA MGP_NODShiLtJ_T0101319.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194885352 194970070 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101320.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194886470 194970070 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101321.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194887231 194937747 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101322.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194890937 194970070 - transcribed_unprocessed_pseudogene retained_intron MGP_NODShiLtJ_T0101323.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194891885 194896841 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101324.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194892618 194897392 - transcribed_unprocessed_pseudogene retained_intron MGP_NODShiLtJ_T0101325.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194902180 194970070 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101326.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194902180 194969899 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101327.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194903207 194914893 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101328.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194903221 194970171 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101329.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194914554 194970035 - transcribed_unprocessed_pseudogene retained_intron MGP_NODShiLtJ_T0101330.1 MGP_NODShiLtJ_G0039572.1 mouse_genomes_project 2 194923524 194970066 - transcribed_unprocessed_pseudogene retained_intron MGP_NODShiLtJ_T0054952.1 MGP_NODShiLtJ_G0025659.1 mouse_genomes_project 2 78369818 78370843 - MGP_NODShiLtJ_P0054952 protein_coding protein_coding MGP_NODShiLtJ_T0054953.1 MGP_NODShiLtJ_G0025659.1 mouse_genomes_project 2 78369884 78370577 - protein_coding processed_transcript MGP_NODShiLtJ_T0017720.1 MGP_NODShiLtJ_G0015335.1 mouse_genomes_project 2 145493496 145499151 + Gm14027 processed_transcript processed_transcript MGP_NODShiLtJ_T0057037.1 MGP_NODShiLtJ_G0026242.1 mouse_genomes_project 2 141352810 141369087 + MGP_NODShiLtJ_P0057037 Ctxn2 protein_coding protein_coding MGP_NODShiLtJ_T0059217.1 MGP_NODShiLtJ_G0026755.1 mouse_genomes_project 2 191602880 191627600 - MGP_NODShiLtJ_P0059217 4930470P17Rik protein_coding protein_coding MGP_NODShiLtJ_T0055372.1 MGP_NODShiLtJ_G0025746.1 mouse_genomes_project 2 93610315 93625888 + MGP_NODShiLtJ_P0055372 Ube2l6 protein_coding protein_coding MGP_NODShiLtJ_T0055373.1 MGP_NODShiLtJ_G0025746.1 mouse_genomes_project 2 93610321 93620954 + MGP_NODShiLtJ_P0055373 Ube2l6 protein_coding protein_coding MGP_NODShiLtJ_T0055374.1 MGP_NODShiLtJ_G0025746.1 mouse_genomes_project 2 93617265 93626045 + Ube2l6 protein_coding processed_transcript MGP_NODShiLtJ_T0055375.1 MGP_NODShiLtJ_G0025746.1 mouse_genomes_project 2 93620791 93623748 + Ube2l6 protein_coding retained_intron MGP_NODShiLtJ_T0052111.1 MGP_NODShiLtJ_G0025162.1 mouse_genomes_project 2 3036163 3062811 + MGP_NODShiLtJ_P0052111 Nudt5 protein_coding protein_coding MGP_NODShiLtJ_T0052112.1 MGP_NODShiLtJ_G0025162.1 mouse_genomes_project 2 3036178 3059710 + MGP_NODShiLtJ_P0052112 Nudt5 protein_coding protein_coding MGP_NODShiLtJ_T0052113.1 MGP_NODShiLtJ_G0025162.1 mouse_genomes_project 2 3036397 3048394 + Nudt5 protein_coding retained_intron MGP_NODShiLtJ_T0052114.1 MGP_NODShiLtJ_G0025162.1 mouse_genomes_project 2 3036397 3055422 + MGP_NODShiLtJ_P0052114 Nudt5 protein_coding protein_coding MGP_NODShiLtJ_T0052115.1 MGP_NODShiLtJ_G0025162.1 mouse_genomes_project 2 3036434 3053362 + MGP_NODShiLtJ_P0052115 Nudt5 protein_coding protein_coding MGP_NODShiLtJ_T0052116.1 MGP_NODShiLtJ_G0025162.1 mouse_genomes_project 2 3039279 3052209 + Nudt5 protein_coding processed_transcript MGP_NODShiLtJ_T0017700.1 MGP_NODShiLtJ_G0015329.1 mouse_genomes_project 2 135865991 135866665 - Gm13997 processed_transcript processed_transcript MGP_NODShiLtJ_T0052330.1 MGP_NODShiLtJ_G0025193.1 mouse_genomes_project 2 11404183 11638977 - MGP_NODShiLtJ_P0052330 Cubn protein_coding protein_coding MGP_NODShiLtJ_T0052331.1 MGP_NODShiLtJ_G0025193.1 mouse_genomes_project 2 11561776 11599914 - Cubn protein_coding retained_intron MGP_NODShiLtJ_T0052332.1 MGP_NODShiLtJ_G0025193.1 mouse_genomes_project 2 11600926 11603767 - Cubn protein_coding retained_intron MGP_NODShiLtJ_T0007184.1 MGP_NODShiLtJ_G0005884.1 mouse_genomes_project 2 82498248 82529515 - A330043C09Rik lincRNA lincRNA MGP_NODShiLtJ_T0013537.1 MGP_NODShiLtJ_G0011645.1 mouse_genomes_project 2 97411086 97411936 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057647.1 MGP_NODShiLtJ_G0026386.1 mouse_genomes_project 2 157885805 157921438 + MGP_NODShiLtJ_P0057647 Ndufaf5 protein_coding protein_coding MGP_NODShiLtJ_T0057648.1 MGP_NODShiLtJ_G0026386.1 mouse_genomes_project 2 157885869 157887462 + Ndufaf5 protein_coding retained_intron MGP_NODShiLtJ_T0057649.1 MGP_NODShiLtJ_G0026386.1 mouse_genomes_project 2 157886178 157921381 + Ndufaf5 protein_coding processed_transcript MGP_NODShiLtJ_T0013581.1 MGP_NODShiLtJ_G0011689.1 mouse_genomes_project 2 117091045 117091306 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017726.1 MGP_NODShiLtJ_G0015340.1 mouse_genomes_project 2 147479393 147514791 - A730017L22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017727.1 MGP_NODShiLtJ_G0015340.1 mouse_genomes_project 2 147488167 147514751 - A730017L22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017728.1 MGP_NODShiLtJ_G0015340.1 mouse_genomes_project 2 147492070 147514774 - A730017L22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0003933.1 MGP_NODShiLtJ_G0003502.1 mouse_genomes_project 2 72102602 72110816 - Gm13619 antisense antisense MGP_NODShiLtJ_T0056297.1 MGP_NODShiLtJ_G0026065.1 mouse_genomes_project 2 124096869 124202691 + MGP_NODShiLtJ_P0056297 Lgr4 protein_coding protein_coding MGP_NODShiLtJ_T0056298.1 MGP_NODShiLtJ_G0026065.1 mouse_genomes_project 2 124096869 124202691 + MGP_NODShiLtJ_P0056298 Lgr4 protein_coding protein_coding MGP_NODShiLtJ_T0056299.1 MGP_NODShiLtJ_G0026065.1 mouse_genomes_project 2 124159449 124181565 + Lgr4 protein_coding processed_transcript MGP_NODShiLtJ_T0056300.1 MGP_NODShiLtJ_G0026065.1 mouse_genomes_project 2 124184857 124185790 + Lgr4 protein_coding retained_intron MGP_NODShiLtJ_T0017661.1 MGP_NODShiLtJ_G0015311.1 mouse_genomes_project 2 102057735 102065343 - Gm13783 processed_transcript processed_transcript MGP_NODShiLtJ_T0004100.1 MGP_NODShiLtJ_G0003620.1 mouse_genomes_project 2 183869897 183870848 + 0610039K10Rik antisense antisense MGP_NODShiLtJ_T0004101.1 MGP_NODShiLtJ_G0003620.1 mouse_genomes_project 2 183869897 183870849 + 0610039K10Rik antisense antisense MGP_NODShiLtJ_T0004126.1 MGP_NODShiLtJ_G0003641.1 mouse_genomes_project 2 194363562 194367489 + Ctcflos antisense antisense MGP_NODShiLtJ_T0004127.1 MGP_NODShiLtJ_G0003641.1 mouse_genomes_project 2 194363579 194386861 + Ctcflos antisense antisense MGP_NODShiLtJ_T0004128.1 MGP_NODShiLtJ_G0003641.1 mouse_genomes_project 2 194373857 194383905 + Ctcflos antisense antisense MGP_NODShiLtJ_T0004129.1 MGP_NODShiLtJ_G0003641.1 mouse_genomes_project 2 194378750 194387826 + Ctcflos antisense antisense MGP_NODShiLtJ_T0013338.1 MGP_NODShiLtJ_G0011446.1 mouse_genomes_project 2 19037446 19038245 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007105.1 MGP_NODShiLtJ_G0005820.1 mouse_genomes_project 2 25859077 25860075 + 1810012K08Rik lincRNA lincRNA MGP_NODShiLtJ_T0054199.1 MGP_NODShiLtJ_G0025521.1 mouse_genomes_project 2 37649931 37650858 + MGP_NODShiLtJ_P0054199 Olfr357 protein_coding protein_coding MGP_NODShiLtJ_T0059110.1 MGP_NODShiLtJ_G0026731.1 mouse_genomes_project 2 188194164 188208583 - MGP_NODShiLtJ_P0059110 Spata2 protein_coding protein_coding MGP_NODShiLtJ_T0059111.1 MGP_NODShiLtJ_G0026731.1 mouse_genomes_project 2 188194587 188208541 - MGP_NODShiLtJ_P0059111 Spata2 protein_coding protein_coding MGP_NODShiLtJ_T0059112.1 MGP_NODShiLtJ_G0026731.1 mouse_genomes_project 2 188199429 188200740 - Spata2 protein_coding retained_intron MGP_NODShiLtJ_T0059113.1 MGP_NODShiLtJ_G0026731.1 mouse_genomes_project 2 188200264 188208568 - Spata2 protein_coding processed_transcript MGP_NODShiLtJ_T0059114.1 MGP_NODShiLtJ_G0026731.1 mouse_genomes_project 2 188200315 188208541 - Spata2 protein_coding processed_transcript MGP_NODShiLtJ_T0059115.1 MGP_NODShiLtJ_G0026731.1 mouse_genomes_project 2 188200422 188208574 - Spata2 protein_coding processed_transcript MGP_NODShiLtJ_T0017631.1 MGP_NODShiLtJ_G0015289.1 mouse_genomes_project 2 62196259 62261483 - BB557941 processed_transcript processed_transcript MGP_NODShiLtJ_T0101105.1 MGP_NODShiLtJ_G0039453.1 mouse_genomes_project 2 169248205 169248886 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101106.1 MGP_NODShiLtJ_G0039453.1 mouse_genomes_project 2 169248438 169249190 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0099131.1 MGP_NODShiLtJ_G0037525.1 mouse_genomes_project 2 144526412 144526549 + Gm23101 snRNA snRNA MGP_NODShiLtJ_T0054533.1 MGP_NODShiLtJ_G0025586.1 mouse_genomes_project 2 63704553 63705516 + MGP_NODShiLtJ_P0054533 Gm17409 protein_coding protein_coding MGP_NODShiLtJ_T0013640.1 MGP_NODShiLtJ_G0011748.1 mouse_genomes_project 2 145859973 145860074 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052031.1 MGP_NODShiLtJ_G0025149.1 mouse_genomes_project 2 486045 499496 + MGP_NODShiLtJ_P0052031 Cdnf protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052032.1 MGP_NODShiLtJ_G0025149.1 mouse_genomes_project 2 486060 499329 + Cdnf protein_coding processed_transcript MGP_NODShiLtJ_T0052033.1 MGP_NODShiLtJ_G0025149.1 mouse_genomes_project 2 486095 501883 + MGP_NODShiLtJ_P0052033 Cdnf protein_coding protein_coding MGP_NODShiLtJ_T0052034.1 MGP_NODShiLtJ_G0025149.1 mouse_genomes_project 2 486914 499407 + Cdnf protein_coding processed_transcript MGP_NODShiLtJ_T0054560.1 MGP_NODShiLtJ_G0025591.1 mouse_genomes_project 2 64716886 64738628 + MGP_NODShiLtJ_P0054560 Dapl1 protein_coding protein_coding MGP_NODShiLtJ_T0054561.1 MGP_NODShiLtJ_G0025591.1 mouse_genomes_project 2 64716902 64738628 + Dapl1 protein_coding processed_transcript MGP_NODShiLtJ_T0055530.1 MGP_NODShiLtJ_G0025856.1 mouse_genomes_project 2 97719919 97720870 + MGP_NODShiLtJ_P0055530 Olfr152 protein_coding protein_coding MGP_NODShiLtJ_T0055531.1 MGP_NODShiLtJ_G0025856.1 mouse_genomes_project 2 97719925 97720870 + MGP_NODShiLtJ_P0055531 Olfr152 protein_coding protein_coding MGP_NODShiLtJ_T0053265.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28557191 28594599 + MGP_NODShiLtJ_P0053265 Tsc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053266.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28557200 28616861 + MGP_NODShiLtJ_P0053266 Tsc1 protein_coding protein_coding MGP_NODShiLtJ_T0053267.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28557204 28616868 + MGP_NODShiLtJ_P0053267 Tsc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053268.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28557204 28616861 + MGP_NODShiLtJ_P0053268 Tsc1 protein_coding protein_coding MGP_NODShiLtJ_T0053269.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28557204 28614242 + MGP_NODShiLtJ_P0053269 Tsc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053270.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28557206 28616861 + MGP_NODShiLtJ_P0053270 Tsc1 protein_coding protein_coding MGP_NODShiLtJ_T0053271.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28557213 28595845 + Tsc1 protein_coding retained_intron MGP_NODShiLtJ_T0053272.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28557217 28588309 + Tsc1 protein_coding retained_intron MGP_NODShiLtJ_T0053273.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28577682 28616861 + MGP_NODShiLtJ_P0053273 Tsc1 protein_coding protein_coding MGP_NODShiLtJ_T0053274.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28582482 28586315 + Tsc1 protein_coding retained_intron MGP_NODShiLtJ_T0053275.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28591364 28595279 + Tsc1 protein_coding retained_intron MGP_NODShiLtJ_T0053276.1 MGP_NODShiLtJ_G0025367.1 mouse_genomes_project 2 28594369 28595421 + Tsc1 protein_coding retained_intron MGP_NODShiLtJ_T0017669.1 MGP_NODShiLtJ_G0015315.1 mouse_genomes_project 2 105090386 105093928 + Alkbh3os1 processed_transcript processed_transcript MGP_NODShiLtJ_T0053988.1 MGP_NODShiLtJ_G0025472.1 mouse_genomes_project 2 33769638 33786925 - MGP_NODShiLtJ_P0053988 Zbtb43 protein_coding protein_coding MGP_NODShiLtJ_T0053989.1 MGP_NODShiLtJ_G0025472.1 mouse_genomes_project 2 33769638 33793092 - MGP_NODShiLtJ_P0053989 Zbtb43 protein_coding protein_coding MGP_NODShiLtJ_T0053990.1 MGP_NODShiLtJ_G0025472.1 mouse_genomes_project 2 33772873 33793065 - MGP_NODShiLtJ_P0053990 Zbtb43 protein_coding protein_coding MGP_NODShiLtJ_T0053991.1 MGP_NODShiLtJ_G0025472.1 mouse_genomes_project 2 33773972 33789655 - MGP_NODShiLtJ_P0053991 Zbtb43 protein_coding protein_coding MGP_NODShiLtJ_T0053992.1 MGP_NODShiLtJ_G0025472.1 mouse_genomes_project 2 33774241 33793119 - MGP_NODShiLtJ_P0053992 Zbtb43 protein_coding protein_coding MGP_NODShiLtJ_T0056448.1 MGP_NODShiLtJ_G0026126.1 mouse_genomes_project 2 132649400 132714413 - MGP_NODShiLtJ_P0056448 Rasgrp1 protein_coding protein_coding MGP_NODShiLtJ_T0056449.1 MGP_NODShiLtJ_G0026126.1 mouse_genomes_project 2 132649401 132714289 - MGP_NODShiLtJ_P0056449 Rasgrp1 protein_coding protein_coding MGP_NODShiLtJ_T0056450.1 MGP_NODShiLtJ_G0026126.1 mouse_genomes_project 2 132651951 132714121 - MGP_NODShiLtJ_P0056450 Rasgrp1 protein_coding protein_coding MGP_NODShiLtJ_T0056451.1 MGP_NODShiLtJ_G0026126.1 mouse_genomes_project 2 132651951 132714121 - MGP_NODShiLtJ_P0056451 Rasgrp1 protein_coding protein_coding MGP_NODShiLtJ_T0056452.1 MGP_NODShiLtJ_G0026126.1 mouse_genomes_project 2 132651951 132714121 - MGP_NODShiLtJ_P0056452 Rasgrp1 protein_coding protein_coding MGP_NODShiLtJ_T0056453.1 MGP_NODShiLtJ_G0026126.1 mouse_genomes_project 2 132651951 132714121 - MGP_NODShiLtJ_P0056453 Rasgrp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056454.1 MGP_NODShiLtJ_G0026126.1 mouse_genomes_project 2 132668870 132714337 - Rasgrp1 protein_coding retained_intron MGP_NODShiLtJ_T0055763.1 MGP_NODShiLtJ_G0025968.1 mouse_genomes_project 2 102044475 102056853 - Nr1h3 protein_coding retained_intron MGP_NODShiLtJ_T0055764.1 MGP_NODShiLtJ_G0025968.1 mouse_genomes_project 2 102044475 102056944 - MGP_NODShiLtJ_P0055764 Nr1h3 protein_coding protein_coding MGP_NODShiLtJ_T0055765.1 MGP_NODShiLtJ_G0025968.1 mouse_genomes_project 2 102044475 102056863 - MGP_NODShiLtJ_P0055765 Nr1h3 protein_coding protein_coding MGP_NODShiLtJ_T0055766.1 MGP_NODShiLtJ_G0025968.1 mouse_genomes_project 2 102044506 102056979 - MGP_NODShiLtJ_P0055766 Nr1h3 protein_coding protein_coding MGP_NODShiLtJ_T0055767.1 MGP_NODShiLtJ_G0025968.1 mouse_genomes_project 2 102044506 102056713 - MGP_NODShiLtJ_P0055767 Nr1h3 protein_coding protein_coding MGP_NODShiLtJ_T0055768.1 MGP_NODShiLtJ_G0025968.1 mouse_genomes_project 2 102044620 102054586 - Nr1h3 protein_coding retained_intron MGP_NODShiLtJ_T0055769.1 MGP_NODShiLtJ_G0025968.1 mouse_genomes_project 2 102051966 102052717 - Nr1h3 protein_coding retained_intron MGP_NODShiLtJ_T0055770.1 MGP_NODShiLtJ_G0025968.1 mouse_genomes_project 2 102053872 102065399 - Nr1h3 protein_coding processed_transcript MGP_NODShiLtJ_T0054201.1 MGP_NODShiLtJ_G0025523.1 mouse_genomes_project 2 37739212 37742727 + MGP_NODShiLtJ_P0054201 Olfr360 protein_coding protein_coding MGP_NODShiLtJ_T0054202.1 MGP_NODShiLtJ_G0025523.1 mouse_genomes_project 2 37741773 37742727 + MGP_NODShiLtJ_P0054202 Olfr360 protein_coding protein_coding MGP_NODShiLtJ_T0017649.1 MGP_NODShiLtJ_G0015304.1 mouse_genomes_project 2 93908147 93914261 - processed_transcript processed_transcript MGP_NODShiLtJ_T0003890.1 MGP_NODShiLtJ_G0003468.1 mouse_genomes_project 2 31791722 31798859 - Gm13425 antisense antisense MGP_NODShiLtJ_T0056951.1 MGP_NODShiLtJ_G0026219.1 mouse_genomes_project 2 137829922 137860117 + MGP_NODShiLtJ_P0056951 Eif3j1 protein_coding protein_coding MGP_NODShiLtJ_T0056953.1 MGP_NODShiLtJ_G0026219.1 mouse_genomes_project 2 137830028 137830705 + Eif3j1 protein_coding processed_transcript MGP_NODShiLtJ_T0007130.1 MGP_NODShiLtJ_G0005838.1 mouse_genomes_project 2 37763074 37763951 - Gm13434 lincRNA lincRNA MGP_NODShiLtJ_T0100427.1 MGP_NODShiLtJ_G0038821.1 mouse_genomes_project 2 187709229 187709319 + Snord12 snoRNA snoRNA MGP_NODShiLtJ_T0100344.1 MGP_NODShiLtJ_G0038738.1 mouse_genomes_project 2 20950689 20950812 - Gm24886 snoRNA snoRNA MGP_NODShiLtJ_T0057202.1 MGP_NODShiLtJ_G0026282.1 mouse_genomes_project 2 144046254 144070722 - MGP_NODShiLtJ_P0057202 Mal protein_coding protein_coding MGP_NODShiLtJ_T0057203.1 MGP_NODShiLtJ_G0026282.1 mouse_genomes_project 2 144047902 144070246 - MGP_NODShiLtJ_P0057203 Mal protein_coding protein_coding MGP_NODShiLtJ_T0058989.1 MGP_NODShiLtJ_G0026711.1 mouse_genomes_project 2 185814431 185822019 - MGP_NODShiLtJ_P0058989 Ocstamp protein_coding protein_coding MGP_NODShiLtJ_T0057767.1 MGP_NODShiLtJ_G0026413.1 mouse_genomes_project 2 164330217 164347514 - MGP_NODShiLtJ_P0057767 Crnkl1 protein_coding protein_coding MGP_NODShiLtJ_T0057768.1 MGP_NODShiLtJ_G0026413.1 mouse_genomes_project 2 164342892 164343891 - Crnkl1 protein_coding retained_intron MGP_NODShiLtJ_T0057769.1 MGP_NODShiLtJ_G0026413.1 mouse_genomes_project 2 164344471 164347214 - Crnkl1 protein_coding retained_intron MGP_NODShiLtJ_T0017697.1 MGP_NODShiLtJ_G0015328.1 mouse_genomes_project 2 134863759 134870753 - Gm14207 processed_transcript processed_transcript MGP_NODShiLtJ_T0017698.1 MGP_NODShiLtJ_G0015328.1 mouse_genomes_project 2 134863759 134870102 - Gm14207 processed_transcript processed_transcript MGP_NODShiLtJ_T0017699.1 MGP_NODShiLtJ_G0015328.1 mouse_genomes_project 2 134863912 134870123 - Gm14207 processed_transcript processed_transcript MGP_NODShiLtJ_T0054997.1 MGP_NODShiLtJ_G0025666.1 mouse_genomes_project 2 79340283 79502583 + MGP_NODShiLtJ_P0054997 Zak protein_coding protein_coding MGP_NODShiLtJ_T0054998.1 MGP_NODShiLtJ_G0025666.1 mouse_genomes_project 2 79340374 79466236 + MGP_NODShiLtJ_P0054998 Zak protein_coding protein_coding MGP_NODShiLtJ_T0054999.1 MGP_NODShiLtJ_G0025666.1 mouse_genomes_project 2 79340410 79457976 + Zak protein_coding retained_intron MGP_NODShiLtJ_T0055000.1 MGP_NODShiLtJ_G0025666.1 mouse_genomes_project 2 79340423 79448578 + Zak protein_coding retained_intron MGP_NODShiLtJ_T0055001.1 MGP_NODShiLtJ_G0025666.1 mouse_genomes_project 2 79340440 79422880 + Zak protein_coding retained_intron MGP_NODShiLtJ_T0055002.1 MGP_NODShiLtJ_G0025666.1 mouse_genomes_project 2 79354561 79413659 + MGP_NODShiLtJ_P0055002 Zak protein_coding protein_coding MGP_NODShiLtJ_T0013610.1 MGP_NODShiLtJ_G0011718.1 mouse_genomes_project 2 127183549 127183850 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098017.1 MGP_NODShiLtJ_G0036429.1 mouse_genomes_project 2 186714395 186714500 + Gm22687 rRNA rRNA MGP_NODShiLtJ_T0013755.1 MGP_NODShiLtJ_G0011863.1 mouse_genomes_project 2 193251250 193251865 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058850.1 MGP_NODShiLtJ_G0026677.1 mouse_genomes_project 2 184890521 184902018 - MGP_NODShiLtJ_P0058850 Wfdc6a protein_coding protein_coding MGP_NODShiLtJ_T0058851.1 MGP_NODShiLtJ_G0026677.1 mouse_genomes_project 2 184890521 184901748 - MGP_NODShiLtJ_P0058851 Wfdc6a protein_coding protein_coding MGP_NODShiLtJ_T0052654.1 MGP_NODShiLtJ_G0025253.1 mouse_genomes_project 2 24577154 24588780 + MGP_NODShiLtJ_P0052654 Dph7 protein_coding protein_coding MGP_NODShiLtJ_T0052655.1 MGP_NODShiLtJ_G0025253.1 mouse_genomes_project 2 24577176 24588778 + MGP_NODShiLtJ_P0052655 Dph7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052656.1 MGP_NODShiLtJ_G0025253.1 mouse_genomes_project 2 24577177 24585535 + MGP_NODShiLtJ_P0052656 Dph7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052657.1 MGP_NODShiLtJ_G0025253.1 mouse_genomes_project 2 24577195 24581917 + MGP_NODShiLtJ_P0052657 Dph7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052658.1 MGP_NODShiLtJ_G0025253.1 mouse_genomes_project 2 24577206 24581872 + MGP_NODShiLtJ_P0052658 Dph7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052659.1 MGP_NODShiLtJ_G0025253.1 mouse_genomes_project 2 24577220 24588780 + Dph7 protein_coding retained_intron MGP_NODShiLtJ_T0052660.1 MGP_NODShiLtJ_G0025253.1 mouse_genomes_project 2 24577227 24586288 + MGP_NODShiLtJ_P0052660 Dph7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010250.1 MGP_NODShiLtJ_G0008383.1 mouse_genomes_project 2 8356610 8356733 + Gm22091 miRNA miRNA MGP_NODShiLtJ_T0013437.1 MGP_NODShiLtJ_G0011545.1 mouse_genomes_project 2 62768675 62768852 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007205.1 MGP_NODShiLtJ_G0005903.1 mouse_genomes_project 2 104133966 104146179 - Gm13802 lincRNA lincRNA MGP_NODShiLtJ_T0013505.1 MGP_NODShiLtJ_G0011613.1 mouse_genomes_project 2 88436740 88437425 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053011.1 MGP_NODShiLtJ_G0025322.1 mouse_genomes_project 2 26083306 26090872 - MGP_NODShiLtJ_P0053011 Card9 protein_coding protein_coding MGP_NODShiLtJ_T0053012.1 MGP_NODShiLtJ_G0025322.1 mouse_genomes_project 2 26083317 26083900 - Card9 protein_coding processed_transcript MGP_NODShiLtJ_T0053013.1 MGP_NODShiLtJ_G0025322.1 mouse_genomes_project 2 26083317 26092043 - MGP_NODShiLtJ_P0053013 Card9 protein_coding protein_coding MGP_NODShiLtJ_T0059529.1 MGP_NODShiLtJ_G0026834.1 mouse_genomes_project 2 202890490 202898947 - MGP_NODShiLtJ_P0059529 Stmn3 protein_coding protein_coding MGP_NODShiLtJ_T0100393.1 MGP_NODShiLtJ_G0038787.1 mouse_genomes_project 2 144094895 144094953 + Gm22889 snoRNA snoRNA MGP_NODShiLtJ_T0054188.1 MGP_NODShiLtJ_G0025511.1 mouse_genomes_project 2 37391391 37394576 + MGP_NODShiLtJ_P0054188 Olfr348 protein_coding protein_coding MGP_NODShiLtJ_T0054189.1 MGP_NODShiLtJ_G0025511.1 mouse_genomes_project 2 37393634 37394576 + MGP_NODShiLtJ_P0054189 Olfr348 protein_coding protein_coding MGP_NODShiLtJ_T0053365.1 MGP_NODShiLtJ_G0025384.1 mouse_genomes_project 2 29878617 29880809 + MGP_NODShiLtJ_P0053365 Cercam protein_coding protein_coding MGP_NODShiLtJ_T0053366.1 MGP_NODShiLtJ_G0025384.1 mouse_genomes_project 2 29878947 29894295 + MGP_NODShiLtJ_P0053366 Cercam protein_coding protein_coding MGP_NODShiLtJ_T0053367.1 MGP_NODShiLtJ_G0025384.1 mouse_genomes_project 2 29878997 29880763 + MGP_NODShiLtJ_P0053367 Cercam protein_coding protein_coding MGP_NODShiLtJ_T0053368.1 MGP_NODShiLtJ_G0025384.1 mouse_genomes_project 2 29885043 29888661 + Cercam protein_coding retained_intron MGP_NODShiLtJ_T0053369.1 MGP_NODShiLtJ_G0025384.1 mouse_genomes_project 2 29885588 29892297 + Cercam protein_coding retained_intron MGP_NODShiLtJ_T0004119.1 MGP_NODShiLtJ_G0003634.1 mouse_genomes_project 2 191361794 191388897 + Bcas1os2 antisense antisense MGP_NODShiLtJ_T0052888.1 MGP_NODShiLtJ_G0025292.1 mouse_genomes_project 2 25232960 25237196 + MGP_NODShiLtJ_P0052888 Edf1 protein_coding protein_coding MGP_NODShiLtJ_T0052889.1 MGP_NODShiLtJ_G0025292.1 mouse_genomes_project 2 25232984 25236475 + Edf1 protein_coding processed_transcript MGP_NODShiLtJ_T0052890.1 MGP_NODShiLtJ_G0025292.1 mouse_genomes_project 2 25233010 25236378 + Edf1 protein_coding processed_transcript MGP_NODShiLtJ_T0052891.1 MGP_NODShiLtJ_G0025292.1 mouse_genomes_project 2 25233252 25236975 + Edf1 protein_coding processed_transcript MGP_NODShiLtJ_T0052892.1 MGP_NODShiLtJ_G0025292.1 mouse_genomes_project 2 25235698 25237196 + Edf1 protein_coding processed_transcript MGP_NODShiLtJ_T0003878.1 MGP_NODShiLtJ_G0003458.1 mouse_genomes_project 2 26912472 26929978 - Dbhos antisense antisense MGP_NODShiLtJ_T0011396.1 MGP_NODShiLtJ_G0009529.1 mouse_genomes_project 2 118468581 118468841 - Gm27715 misc_RNA misc_RNA MGP_NODShiLtJ_T0101823.1 MGP_NODShiLtJ_G0039991.1 mouse_genomes_project 2 97826514 97827452 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0058529.1 MGP_NODShiLtJ_G0026597.1 mouse_genomes_project 2 176798598 176879488 - MGP_NODShiLtJ_P0058529 Rbl1 protein_coding protein_coding MGP_NODShiLtJ_T0058530.1 MGP_NODShiLtJ_G0026597.1 mouse_genomes_project 2 176827514 176879510 - Rbl1 protein_coding retained_intron MGP_NODShiLtJ_T0058531.1 MGP_NODShiLtJ_G0026597.1 mouse_genomes_project 2 176832945 176879502 - Rbl1 protein_coding retained_intron MGP_NODShiLtJ_T0058532.1 MGP_NODShiLtJ_G0026597.1 mouse_genomes_project 2 176861743 176865864 - Rbl1 protein_coding retained_intron MGP_NODShiLtJ_T0055361.1 MGP_NODShiLtJ_G0025742.1 mouse_genomes_project 2 93530647 93536672 - MGP_NODShiLtJ_P0055361 Clp1 protein_coding protein_coding MGP_NODShiLtJ_T0055362.1 MGP_NODShiLtJ_G0025742.1 mouse_genomes_project 2 93531534 93536780 - MGP_NODShiLtJ_P0055362 Clp1 protein_coding protein_coding MGP_NODShiLtJ_T0055363.1 MGP_NODShiLtJ_G0025742.1 mouse_genomes_project 2 93531536 93536706 - Clp1 protein_coding processed_transcript MGP_NODShiLtJ_T0052728.1 MGP_NODShiLtJ_G0025265.1 mouse_genomes_project 2 24869444 24875728 - MGP_NODShiLtJ_P0052728 Slc34a3 protein_coding protein_coding MGP_NODShiLtJ_T0052729.1 MGP_NODShiLtJ_G0025265.1 mouse_genomes_project 2 24871328 24874410 - Slc34a3 protein_coding processed_transcript MGP_NODShiLtJ_T0052730.1 MGP_NODShiLtJ_G0025265.1 mouse_genomes_project 2 24872510 24875582 - Slc34a3 protein_coding processed_transcript MGP_NODShiLtJ_T0052731.1 MGP_NODShiLtJ_G0025265.1 mouse_genomes_project 2 24872551 24875575 - Slc34a3 protein_coding processed_transcript MGP_NODShiLtJ_T0052732.1 MGP_NODShiLtJ_G0025265.1 mouse_genomes_project 2 24872556 24875072 - Slc34a3 protein_coding processed_transcript MGP_NODShiLtJ_T0052733.1 MGP_NODShiLtJ_G0025265.1 mouse_genomes_project 2 24872827 24875598 - Slc34a3 protein_coding processed_transcript MGP_NODShiLtJ_T0052734.1 MGP_NODShiLtJ_G0025265.1 mouse_genomes_project 2 24873790 24875552 - Slc34a3 protein_coding processed_transcript MGP_NODShiLtJ_T0017600.1 MGP_NODShiLtJ_G0015271.1 mouse_genomes_project 2 26083769 26103077 + Gm13562 processed_transcript processed_transcript MGP_NODShiLtJ_T0017601.1 MGP_NODShiLtJ_G0015271.1 mouse_genomes_project 2 26096621 26100888 + Gm13562 processed_transcript processed_transcript MGP_NODShiLtJ_T0058240.1 MGP_NODShiLtJ_G0026554.1 mouse_genomes_project 2 174902434 174955824 - MGP_NODShiLtJ_P0058240 Ncoa6 protein_coding protein_coding MGP_NODShiLtJ_T0058241.1 MGP_NODShiLtJ_G0026554.1 mouse_genomes_project 2 174902443 174990902 - MGP_NODShiLtJ_P0058241 Ncoa6 protein_coding protein_coding MGP_NODShiLtJ_T0058242.1 MGP_NODShiLtJ_G0026554.1 mouse_genomes_project 2 174902447 174908457 - Ncoa6 protein_coding retained_intron MGP_NODShiLtJ_T0058243.1 MGP_NODShiLtJ_G0026554.1 mouse_genomes_project 2 174902447 174915892 - Ncoa6 protein_coding retained_intron MGP_NODShiLtJ_T0058244.1 MGP_NODShiLtJ_G0026554.1 mouse_genomes_project 2 174919165 174990990 - MGP_NODShiLtJ_P0058244 Ncoa6 protein_coding protein_coding MGP_NODShiLtJ_T0058245.1 MGP_NODShiLtJ_G0026554.1 mouse_genomes_project 2 174929410 174933951 - Ncoa6 protein_coding processed_transcript MGP_NODShiLtJ_T0058246.1 MGP_NODShiLtJ_G0026554.1 mouse_genomes_project 2 174935323 174955826 - MGP_NODShiLtJ_P0058246 Ncoa6 protein_coding protein_coding MGP_NODShiLtJ_T0058247.1 MGP_NODShiLtJ_G0026554.1 mouse_genomes_project 2 174953054 174990920 - Ncoa6 protein_coding processed_transcript MGP_NODShiLtJ_T0100408.1 MGP_NODShiLtJ_G0038802.1 mouse_genomes_project 2 169836981 169837125 + Gm23598 snoRNA snoRNA MGP_NODShiLtJ_T0054407.1 MGP_NODShiLtJ_G0025558.1 mouse_genomes_project 2 53025920 53157697 + MGP_NODShiLtJ_P0054407 Epc2 protein_coding protein_coding MGP_NODShiLtJ_T0054408.1 MGP_NODShiLtJ_G0025558.1 mouse_genomes_project 2 53131389 53141690 + MGP_NODShiLtJ_P0054408 Epc2 protein_coding protein_coding MGP_NODShiLtJ_T0003998.1 MGP_NODShiLtJ_G0003543.1 mouse_genomes_project 2 124215058 124235674 - Ccdc34os antisense antisense MGP_NODShiLtJ_T0003999.1 MGP_NODShiLtJ_G0003543.1 mouse_genomes_project 2 124215059 124235677 - Ccdc34os antisense antisense MGP_NODShiLtJ_T0053679.1 MGP_NODShiLtJ_G0025426.1 mouse_genomes_project 2 31834321 31850312 + MGP_NODShiLtJ_P0053679 Exosc2 protein_coding protein_coding MGP_NODShiLtJ_T0053680.1 MGP_NODShiLtJ_G0025426.1 mouse_genomes_project 2 31834325 31849496 + Exosc2 protein_coding retained_intron MGP_NODShiLtJ_T0053681.1 MGP_NODShiLtJ_G0025426.1 mouse_genomes_project 2 31834340 31849035 + MGP_NODShiLtJ_P0053681 Exosc2 protein_coding protein_coding MGP_NODShiLtJ_T0053682.1 MGP_NODShiLtJ_G0025426.1 mouse_genomes_project 2 31834349 31844964 + MGP_NODShiLtJ_P0053682 Exosc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053683.1 MGP_NODShiLtJ_G0025426.1 mouse_genomes_project 2 31838028 31845037 + Exosc2 protein_coding processed_transcript MGP_NODShiLtJ_T0053684.1 MGP_NODShiLtJ_G0025426.1 mouse_genomes_project 2 31844787 31849028 + Exosc2 protein_coding retained_intron MGP_NODShiLtJ_T0101826.1 MGP_NODShiLtJ_G0039994.1 mouse_genomes_project 2 98480501 98481437 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059627.1 MGP_NODShiLtJ_G0026847.1 mouse_genomes_project 2 203215120 203219115 - MGP_NODShiLtJ_P0059627 Samd10 protein_coding protein_coding MGP_NODShiLtJ_T0059628.1 MGP_NODShiLtJ_G0026847.1 mouse_genomes_project 2 203215123 203219101 - MGP_NODShiLtJ_P0059628 Samd10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059629.1 MGP_NODShiLtJ_G0026847.1 mouse_genomes_project 2 203216694 203217509 - Samd10 protein_coding retained_intron MGP_NODShiLtJ_T0054869.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76729032 76876705 + MGP_NODShiLtJ_P0054869 Ubr3 protein_coding protein_coding MGP_NODShiLtJ_T0054870.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76729032 76876705 + MGP_NODShiLtJ_P0054870 Ubr3 protein_coding protein_coding MGP_NODShiLtJ_T0054871.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76729089 76776172 + MGP_NODShiLtJ_P0054871 Ubr3 protein_coding protein_coding MGP_NODShiLtJ_T0054872.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76773108 76783410 + Ubr3 protein_coding processed_transcript MGP_NODShiLtJ_T0054873.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76834360 76859156 + MGP_NODShiLtJ_P0054873 Ubr3 protein_coding protein_coding MGP_NODShiLtJ_T0054874.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76841214 76875237 + Ubr3 protein_coding processed_transcript MGP_NODShiLtJ_T0054875.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76848589 76859294 + Ubr3 protein_coding processed_transcript MGP_NODShiLtJ_T0054876.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76858974 76868266 + Ubr3 protein_coding processed_transcript MGP_NODShiLtJ_T0054877.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76872819 76873878 + Ubr3 protein_coding processed_transcript MGP_NODShiLtJ_T0054878.1 MGP_NODShiLtJ_G0025644.1 mouse_genomes_project 2 76873203 76874912 + Ubr3 protein_coding processed_transcript MGP_NODShiLtJ_T0054673.1 MGP_NODShiLtJ_G0025606.1 mouse_genomes_project 2 68108496 68117622 - MGP_NODShiLtJ_P0054673 Gcg protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054674.1 MGP_NODShiLtJ_G0025606.1 mouse_genomes_project 2 68111991 68120711 - MGP_NODShiLtJ_P0054674 Gcg protein_coding protein_coding MGP_NODShiLtJ_T0054675.1 MGP_NODShiLtJ_G0025606.1 mouse_genomes_project 2 68112829 68117744 - Gcg protein_coding processed_transcript MGP_NODShiLtJ_T0101791.1 MGP_NODShiLtJ_G0039959.1 mouse_genomes_project 2 37109738 37110034 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0056334.1 MGP_NODShiLtJ_G0026085.1 mouse_genomes_project 2 126271516 126272455 - MGP_NODShiLtJ_P0056334 protein_coding protein_coding MGP_NODShiLtJ_T0055953.1 MGP_NODShiLtJ_G0025998.1 mouse_genomes_project 2 104257642 104398509 - MGP_NODShiLtJ_P0055953 Tspan18 protein_coding protein_coding MGP_NODShiLtJ_T0055954.1 MGP_NODShiLtJ_G0025998.1 mouse_genomes_project 2 104260047 104286862 - MGP_NODShiLtJ_P0055954 Tspan18 protein_coding protein_coding MGP_NODShiLtJ_T0055955.1 MGP_NODShiLtJ_G0025998.1 mouse_genomes_project 2 104375308 104398527 - Tspan18 protein_coding processed_transcript MGP_NODShiLtJ_T0055956.1 MGP_NODShiLtJ_G0025998.1 mouse_genomes_project 2 104375308 104376561 - Tspan18 protein_coding processed_transcript MGP_NODShiLtJ_T0100380.1 MGP_NODShiLtJ_G0038774.1 mouse_genomes_project 2 105799764 105799895 + Gm24318 snoRNA snoRNA MGP_NODShiLtJ_T0013654.1 MGP_NODShiLtJ_G0011762.1 mouse_genomes_project 2 149431031 149431636 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055584.1 MGP_NODShiLtJ_G0025907.1 mouse_genomes_project 2 99442315 99443251 - MGP_NODShiLtJ_P0055584 Olfr1218 protein_coding protein_coding MGP_NODShiLtJ_T0003929.1 MGP_NODShiLtJ_G0003498.1 mouse_genomes_project 2 68523666 68525221 + Gm13569 antisense antisense MGP_NODShiLtJ_T0055423.1 MGP_NODShiLtJ_G0025759.1 mouse_genomes_project 2 94203566 94215198 - MGP_NODShiLtJ_P0055423 protein_coding protein_coding MGP_NODShiLtJ_T0055627.1 MGP_NODShiLtJ_G0025942.1 mouse_genomes_project 2 100595428 100596585 - MGP_NODShiLtJ_P0055627 Olfr1259 protein_coding protein_coding MGP_NODShiLtJ_T0013572.1 MGP_NODShiLtJ_G0011680.1 mouse_genomes_project 2 115265619 115266085 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054183.1 MGP_NODShiLtJ_G0025506.1 mouse_genomes_project 2 37087142 37088081 + MGP_NODShiLtJ_P0054183 Olfr342 protein_coding protein_coding MGP_NODShiLtJ_T0003916.1 MGP_NODShiLtJ_G0003490.1 mouse_genomes_project 2 47649292 47653821 + Zeb2os antisense antisense MGP_NODShiLtJ_T0003917.1 MGP_NODShiLtJ_G0003490.1 mouse_genomes_project 2 47650421 47653821 + Zeb2os antisense antisense MGP_NODShiLtJ_T0010359.1 MGP_NODShiLtJ_G0008492.1 mouse_genomes_project 2 156230233 156230312 + Mir1952 miRNA miRNA MGP_NODShiLtJ_T0059516.1 MGP_NODShiLtJ_G0026830.1 mouse_genomes_project 2 202774342 202782008 - MGP_NODShiLtJ_P0059516 Srms protein_coding protein_coding MGP_NODShiLtJ_T0013478.1 MGP_NODShiLtJ_G0011586.1 mouse_genomes_project 2 79609706 79610107 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099147.1 MGP_NODShiLtJ_G0037541.1 mouse_genomes_project 2 202238402 202238509 + Gm22502 snRNA snRNA MGP_NODShiLtJ_T0007226.1 MGP_NODShiLtJ_G0005917.1 mouse_genomes_project 2 119031046 119033874 - Paupar lincRNA lincRNA MGP_NODShiLtJ_T0017780.1 MGP_NODShiLtJ_G0015366.1 mouse_genomes_project 2 201459995 201462154 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017781.1 MGP_NODShiLtJ_G0015366.1 mouse_genomes_project 2 201460590 201461128 + processed_transcript processed_transcript MGP_NODShiLtJ_T0013569.1 MGP_NODShiLtJ_G0011677.1 mouse_genomes_project 2 113452361 113453708 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013480.1 MGP_NODShiLtJ_G0011588.1 mouse_genomes_project 2 79709933 79711090 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052471.1 MGP_NODShiLtJ_G0025222.1 mouse_genomes_project 2 18587293 18590126 + MGP_NODShiLtJ_P0052471 Otud1 protein_coding protein_coding MGP_NODShiLtJ_T0001036.1 MGP_NODShiLtJ_G0000962.1 mouse_genomes_project 2 24485808 24491513 - TEC TEC MGP_NODShiLtJ_T0004139.1 MGP_NODShiLtJ_G0003648.1 mouse_genomes_project 2 203197043 203203815 + Uckl1os antisense antisense MGP_NODShiLtJ_T0004140.1 MGP_NODShiLtJ_G0003648.1 mouse_genomes_project 2 203197048 203199390 + Uckl1os antisense antisense MGP_NODShiLtJ_T0004141.1 MGP_NODShiLtJ_G0003648.1 mouse_genomes_project 2 203197081 203199397 + Uckl1os antisense antisense MGP_NODShiLtJ_T0004142.1 MGP_NODShiLtJ_G0003648.1 mouse_genomes_project 2 203198052 203199676 + Uckl1os antisense antisense MGP_NODShiLtJ_T0004143.1 MGP_NODShiLtJ_G0003648.1 mouse_genomes_project 2 203198095 203200850 + Uckl1os antisense antisense MGP_NODShiLtJ_T0004144.1 MGP_NODShiLtJ_G0003648.1 mouse_genomes_project 2 203198161 203199909 + Uckl1os antisense antisense MGP_NODShiLtJ_T0004145.1 MGP_NODShiLtJ_G0003648.1 mouse_genomes_project 2 203200940 203203866 + Uckl1os antisense antisense MGP_NODShiLtJ_T0010387.1 MGP_NODShiLtJ_G0008520.1 mouse_genomes_project 2 195626460 195626542 - Mir298 miRNA miRNA MGP_NODShiLtJ_T0058013.1 MGP_NODShiLtJ_G0026496.1 mouse_genomes_project 2 171937591 171948479 + MGP_NODShiLtJ_P0058013 Cox4i2 protein_coding protein_coding MGP_NODShiLtJ_T0058014.1 MGP_NODShiLtJ_G0026496.1 mouse_genomes_project 2 171938516 171948476 + MGP_NODShiLtJ_P0058014 Cox4i2 protein_coding protein_coding MGP_NODShiLtJ_T0013291.1 MGP_NODShiLtJ_G0011399.1 mouse_genomes_project 2 1908495 1908972 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099129.1 MGP_NODShiLtJ_G0037523.1 mouse_genomes_project 2 141319129 141319236 + Gm22352 snRNA snRNA MGP_NODShiLtJ_T0056872.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137064915 137067362 + MGP_NODShiLtJ_P0056872 Ckmt1 protein_coding protein_coding MGP_NODShiLtJ_T0056873.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137064977 137071034 + MGP_NODShiLtJ_P0056873 Ckmt1 protein_coding protein_coding MGP_NODShiLtJ_T0056874.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137065041 137067099 + MGP_NODShiLtJ_P0056874 Ckmt1 protein_coding protein_coding MGP_NODShiLtJ_T0056875.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137065108 137068288 + MGP_NODShiLtJ_P0056875 Ckmt1 protein_coding protein_coding MGP_NODShiLtJ_T0056876.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137065813 137071034 + MGP_NODShiLtJ_P0056876 Ckmt1 protein_coding protein_coding MGP_NODShiLtJ_T0056877.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137065859 137068285 + MGP_NODShiLtJ_P0056877 Ckmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056878.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137065862 137067683 + Ckmt1 protein_coding retained_intron MGP_NODShiLtJ_T0056879.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137065869 137067927 + MGP_NODShiLtJ_P0056879 Ckmt1 protein_coding protein_coding MGP_NODShiLtJ_T0056880.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137066047 137067341 + MGP_NODShiLtJ_P0056880 Ckmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056881.1 MGP_NODShiLtJ_G0026204.1 mouse_genomes_project 2 137070218 137071033 + Ckmt1 protein_coding retained_intron MGP_NODShiLtJ_T0010316.1 MGP_NODShiLtJ_G0008449.1 mouse_genomes_project 2 74339009 74339107 + Mir6335 miRNA miRNA MGP_NODShiLtJ_T0055344.1 MGP_NODShiLtJ_G0025738.1 mouse_genomes_project 2 93468075 93469631 - MGP_NODShiLtJ_P0055344 2700094K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0055345.1 MGP_NODShiLtJ_G0025738.1 mouse_genomes_project 2 93468081 93469569 - MGP_NODShiLtJ_P0055345 2700094K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0055346.1 MGP_NODShiLtJ_G0025738.1 mouse_genomes_project 2 93468167 93469537 - MGP_NODShiLtJ_P0055346 2700094K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0055347.1 MGP_NODShiLtJ_G0025738.1 mouse_genomes_project 2 93468555 93469558 - MGP_NODShiLtJ_P0055347 2700094K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0055348.1 MGP_NODShiLtJ_G0025738.1 mouse_genomes_project 2 93468810 93469537 - 2700094K13Rik protein_coding retained_intron MGP_NODShiLtJ_T0055349.1 MGP_NODShiLtJ_G0025738.1 mouse_genomes_project 2 93468877 93469515 - MGP_NODShiLtJ_P0055349 2700094K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0010355.1 MGP_NODShiLtJ_G0008488.1 mouse_genomes_project 2 147093709 147093764 - Gm23876 miRNA miRNA MGP_NODShiLtJ_T0053131.1 MGP_NODShiLtJ_G0025339.1 mouse_genomes_project 2 26680720 26684537 + MGP_NODShiLtJ_P0053131 Surf2 protein_coding protein_coding MGP_NODShiLtJ_T0053132.1 MGP_NODShiLtJ_G0025339.1 mouse_genomes_project 2 26680734 26684526 + Surf2 protein_coding processed_transcript MGP_NODShiLtJ_T0053133.1 MGP_NODShiLtJ_G0025339.1 mouse_genomes_project 2 26681022 26684175 + Surf2 protein_coding processed_transcript MGP_NODShiLtJ_T0053134.1 MGP_NODShiLtJ_G0025339.1 mouse_genomes_project 2 26681022 26684520 + Surf2 protein_coding retained_intron MGP_NODShiLtJ_T0053135.1 MGP_NODShiLtJ_G0025339.1 mouse_genomes_project 2 26681166 26684307 + Surf2 protein_coding processed_transcript MGP_NODShiLtJ_T0053136.1 MGP_NODShiLtJ_G0025339.1 mouse_genomes_project 2 26681781 26684189 + Surf2 protein_coding processed_transcript MGP_NODShiLtJ_T0057342.1 MGP_NODShiLtJ_G0026321.1 mouse_genomes_project 2 146973767 146980815 - Pced1a protein_coding processed_transcript MGP_NODShiLtJ_T0057343.1 MGP_NODShiLtJ_G0026321.1 mouse_genomes_project 2 146974203 146980845 - MGP_NODShiLtJ_P0057343 Pced1a protein_coding protein_coding MGP_NODShiLtJ_T0057344.1 MGP_NODShiLtJ_G0026321.1 mouse_genomes_project 2 146974850 146980848 - Pced1a protein_coding processed_transcript MGP_NODShiLtJ_T0057345.1 MGP_NODShiLtJ_G0026321.1 mouse_genomes_project 2 146974874 146980833 - Pced1a protein_coding retained_intron MGP_NODShiLtJ_T0057346.1 MGP_NODShiLtJ_G0026321.1 mouse_genomes_project 2 146975603 146981254 - MGP_NODShiLtJ_P0057346 Pced1a protein_coding protein_coding MGP_NODShiLtJ_T0057347.1 MGP_NODShiLtJ_G0026321.1 mouse_genomes_project 2 146975614 146981268 - Pced1a protein_coding retained_intron MGP_NODShiLtJ_T0057348.1 MGP_NODShiLtJ_G0026321.1 mouse_genomes_project 2 146978460 146980877 - Pced1a protein_coding retained_intron MGP_NODShiLtJ_T0017653.1 MGP_NODShiLtJ_G0015308.1 mouse_genomes_project 2 99002935 99003307 - processed_transcript processed_transcript MGP_NODShiLtJ_T0001025.1 MGP_NODShiLtJ_G0000951.1 mouse_genomes_project 2 12912198 12913607 + TEC TEC MGP_NODShiLtJ_T0004030.1 MGP_NODShiLtJ_G0003567.1 mouse_genomes_project 2 145867095 145872948 + Il1bos antisense antisense MGP_NODShiLtJ_T0004031.1 MGP_NODShiLtJ_G0003567.1 mouse_genomes_project 2 145867100 145872933 + Il1bos antisense antisense MGP_NODShiLtJ_T0004032.1 MGP_NODShiLtJ_G0003567.1 mouse_genomes_project 2 145870328 145872277 + Il1bos antisense antisense MGP_NODShiLtJ_T0059127.1 MGP_NODShiLtJ_G0026736.1 mouse_genomes_project 2 188426833 188428337 + MGP_NODShiLtJ_P0059127 Cebpb protein_coding protein_coding MGP_NODShiLtJ_T0057996.1 MGP_NODShiLtJ_G0026488.1 mouse_genomes_project 2 171749983 171754404 - MGP_NODShiLtJ_P0057996 Defb19 protein_coding protein_coding MGP_NODShiLtJ_T0013593.1 MGP_NODShiLtJ_G0011701.1 mouse_genomes_project 2 120521227 120522064 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013390.1 MGP_NODShiLtJ_G0011498.1 mouse_genomes_project 2 40508138 40508730 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057301.1 MGP_NODShiLtJ_G0026310.1 mouse_genomes_project 2 146538956 146579421 + MGP_NODShiLtJ_P0057301 Tgm3 protein_coding protein_coding MGP_NODShiLtJ_T0010373.1 MGP_NODShiLtJ_G0008506.1 mouse_genomes_project 2 178892254 178892347 + Gm44319 miRNA miRNA MGP_NODShiLtJ_T0059128.1 MGP_NODShiLtJ_G0026737.1 mouse_genomes_project 2 188696075 188739120 + Ptpn1 protein_coding processed_transcript MGP_NODShiLtJ_T0059129.1 MGP_NODShiLtJ_G0026737.1 mouse_genomes_project 2 188696345 188743768 + MGP_NODShiLtJ_P0059129 Ptpn1 protein_coding protein_coding MGP_NODShiLtJ_T0059130.1 MGP_NODShiLtJ_G0026737.1 mouse_genomes_project 2 188696390 188732169 + Ptpn1 protein_coding processed_transcript MGP_NODShiLtJ_T0059131.1 MGP_NODShiLtJ_G0026737.1 mouse_genomes_project 2 188696390 188743768 + Ptpn1 protein_coding processed_transcript MGP_NODShiLtJ_T0059132.1 MGP_NODShiLtJ_G0026737.1 mouse_genomes_project 2 188696413 188728071 + Ptpn1 protein_coding processed_transcript MGP_NODShiLtJ_T0059133.1 MGP_NODShiLtJ_G0026737.1 mouse_genomes_project 2 188696413 188732117 + Ptpn1 protein_coding processed_transcript MGP_NODShiLtJ_T0059134.1 MGP_NODShiLtJ_G0026737.1 mouse_genomes_project 2 188715382 188729451 + Ptpn1 protein_coding processed_transcript MGP_NODShiLtJ_T0004050.1 MGP_NODShiLtJ_G0003579.1 mouse_genomes_project 2 153285939 153289085 + Gm14218 antisense antisense MGP_NODShiLtJ_T0003959.1 MGP_NODShiLtJ_G0003520.1 mouse_genomes_project 2 80763863 80768200 + Chrna1os antisense antisense MGP_NODShiLtJ_T0003960.1 MGP_NODShiLtJ_G0003520.1 mouse_genomes_project 2 80763873 80768221 + Chrna1os antisense antisense MGP_NODShiLtJ_T0059682.1 MGP_NODShiLtJ_G0026856.1 mouse_genomes_project 2 203556133 203558152 + MGP_NODShiLtJ_P0059682 protein_coding protein_coding MGP_NODShiLtJ_T0058157.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173842191 173956661 + MGP_NODShiLtJ_P0058157 Cbfa2t2 protein_coding protein_coding MGP_NODShiLtJ_T0058158.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173842194 173943057 + MGP_NODShiLtJ_P0058158 Cbfa2t2 protein_coding protein_coding MGP_NODShiLtJ_T0058159.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173842205 173956661 + MGP_NODShiLtJ_P0058159 Cbfa2t2 protein_coding protein_coding MGP_NODShiLtJ_T0058160.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173842245 173934493 + MGP_NODShiLtJ_P0058160 Cbfa2t2 protein_coding protein_coding MGP_NODShiLtJ_T0058161.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173842552 173921452 + MGP_NODShiLtJ_P0058161 Cbfa2t2 protein_coding protein_coding MGP_NODShiLtJ_T0058162.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173917074 173956657 + MGP_NODShiLtJ_P0058162 Cbfa2t2 protein_coding protein_coding MGP_NODShiLtJ_T0058163.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173932630 173934721 + Cbfa2t2 protein_coding retained_intron MGP_NODShiLtJ_T0058164.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173940627 173948239 + Cbfa2t2 protein_coding retained_intron MGP_NODShiLtJ_T0058165.1 MGP_NODShiLtJ_G0026535.1 mouse_genomes_project 2 173947678 173952281 + Cbfa2t2 protein_coding retained_intron MGP_NODShiLtJ_T0010354.1 MGP_NODShiLtJ_G0008487.1 mouse_genomes_project 2 146542952 146543069 - Mir6339 miRNA miRNA MGP_NODShiLtJ_T0057167.1 MGP_NODShiLtJ_G0026273.1 mouse_genomes_project 2 143735716 143737934 + MGP_NODShiLtJ_P0057167 Dusp2 protein_coding protein_coding MGP_NODShiLtJ_T0057168.1 MGP_NODShiLtJ_G0026273.1 mouse_genomes_project 2 143736167 143737062 + Dusp2 protein_coding retained_intron MGP_NODShiLtJ_T0056603.1 MGP_NODShiLtJ_G0026167.1 mouse_genomes_project 2 135334049 135342914 - MGP_NODShiLtJ_P0056603 Ltk protein_coding protein_coding MGP_NODShiLtJ_T0056604.1 MGP_NODShiLtJ_G0026167.1 mouse_genomes_project 2 135334051 135341222 - Ltk protein_coding retained_intron MGP_NODShiLtJ_T0056605.1 MGP_NODShiLtJ_G0026167.1 mouse_genomes_project 2 135334051 135342913 - MGP_NODShiLtJ_P0056605 Ltk protein_coding protein_coding MGP_NODShiLtJ_T0056606.1 MGP_NODShiLtJ_G0026167.1 mouse_genomes_project 2 135334055 135343050 - MGP_NODShiLtJ_P0056606 Ltk protein_coding protein_coding MGP_NODShiLtJ_T0056607.1 MGP_NODShiLtJ_G0026167.1 mouse_genomes_project 2 135334057 135341226 - MGP_NODShiLtJ_P0056607 Ltk protein_coding protein_coding MGP_NODShiLtJ_T0056608.1 MGP_NODShiLtJ_G0026167.1 mouse_genomes_project 2 135334059 135341220 - Ltk protein_coding retained_intron MGP_NODShiLtJ_T0056525.1 MGP_NODShiLtJ_G0026144.1 mouse_genomes_project 2 134538910 134552198 - MGP_NODShiLtJ_P0056525 Ccdc32 protein_coding protein_coding MGP_NODShiLtJ_T0056526.1 MGP_NODShiLtJ_G0026144.1 mouse_genomes_project 2 134542847 134552198 - MGP_NODShiLtJ_P0056526 Ccdc32 protein_coding protein_coding MGP_NODShiLtJ_T0056527.1 MGP_NODShiLtJ_G0026144.1 mouse_genomes_project 2 134542918 134552182 - MGP_NODShiLtJ_P0056527 Ccdc32 protein_coding protein_coding MGP_NODShiLtJ_T0058497.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176552283 176628375 - MGP_NODShiLtJ_P0058497 Ndrg3 protein_coding protein_coding MGP_NODShiLtJ_T0058498.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176552283 176628362 - MGP_NODShiLtJ_P0058498 Ndrg3 protein_coding protein_coding MGP_NODShiLtJ_T0058499.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176553341 176575234 - Ndrg3 protein_coding processed_transcript MGP_NODShiLtJ_T0058500.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176553638 176628410 - MGP_NODShiLtJ_P0058500 Ndrg3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058501.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176556090 176561517 - Ndrg3 protein_coding processed_transcript MGP_NODShiLtJ_T0058502.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176560826 176628354 - MGP_NODShiLtJ_P0058502 Ndrg3 protein_coding protein_coding MGP_NODShiLtJ_T0058503.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176566795 176586091 - Ndrg3 protein_coding processed_transcript MGP_NODShiLtJ_T0058504.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176577559 176628319 - Ndrg3 protein_coding processed_transcript MGP_NODShiLtJ_T0058505.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176580958 176628246 - Ndrg3 protein_coding processed_transcript MGP_NODShiLtJ_T0058506.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176589040 176628366 - Ndrg3 protein_coding retained_intron MGP_NODShiLtJ_T0058507.1 MGP_NODShiLtJ_G0026592.1 mouse_genomes_project 2 176602708 176628315 - Ndrg3 protein_coding processed_transcript MGP_NODShiLtJ_T0003835.1 MGP_NODShiLtJ_G0003426.1 mouse_genomes_project 2 2144415 2149396 + 4930551O13Rik antisense antisense MGP_NODShiLtJ_T0010261.1 MGP_NODShiLtJ_G0008394.1 mouse_genomes_project 2 8362274 8362368 + Mir466n miRNA miRNA MGP_NODShiLtJ_T0057643.1 MGP_NODShiLtJ_G0026385.1 mouse_genomes_project 2 157854681 157866804 + MGP_NODShiLtJ_P0057643 Gm17374 protein_coding protein_coding MGP_NODShiLtJ_T0054699.1 MGP_NODShiLtJ_G0025611.1 mouse_genomes_project 2 69988043 70125274 - MGP_NODShiLtJ_P0054699 Fign protein_coding protein_coding MGP_NODShiLtJ_T0054700.1 MGP_NODShiLtJ_G0025611.1 mouse_genomes_project 2 69993837 70125300 - MGP_NODShiLtJ_P0054700 Fign protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054701.1 MGP_NODShiLtJ_G0025611.1 mouse_genomes_project 2 69996943 70125250 - Fign protein_coding processed_transcript MGP_NODShiLtJ_T0054702.1 MGP_NODShiLtJ_G0025611.1 mouse_genomes_project 2 69997112 70125272 - Fign protein_coding processed_transcript MGP_NODShiLtJ_T0057937.1 MGP_NODShiLtJ_G0026463.1 mouse_genomes_project 2 170797708 170803030 + MGP_NODShiLtJ_P0057937 Tmem74b protein_coding protein_coding MGP_NODShiLtJ_T0057938.1 MGP_NODShiLtJ_G0026463.1 mouse_genomes_project 2 170798011 170807786 + MGP_NODShiLtJ_P0057938 Tmem74b protein_coding protein_coding MGP_NODShiLtJ_T0013641.1 MGP_NODShiLtJ_G0011749.1 mouse_genomes_project 2 146266944 146267453 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003861.1 MGP_NODShiLtJ_G0003449.1 mouse_genomes_project 2 24931717 24941191 + Grin1os antisense antisense MGP_NODShiLtJ_T0013286.1 MGP_NODShiLtJ_G0011394.1 mouse_genomes_project 2 674313 675102 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007142.1 MGP_NODShiLtJ_G0005849.1 mouse_genomes_project 2 55015065 55015546 + Gm28639 lincRNA lincRNA MGP_NODShiLtJ_T0010264.1 MGP_NODShiLtJ_G0008397.1 mouse_genomes_project 2 8363424 8363505 + Mir466h miRNA miRNA MGP_NODShiLtJ_T0013379.1 MGP_NODShiLtJ_G0011487.1 mouse_genomes_project 2 38217712 38218482 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058749.1 MGP_NODShiLtJ_G0026644.1 mouse_genomes_project 2 183707930 183718195 + MGP_NODShiLtJ_P0058749 R3hdml protein_coding protein_coding MGP_NODShiLtJ_T0055377.1 MGP_NODShiLtJ_G0025748.1 mouse_genomes_project 2 93642668 93645865 + MGP_NODShiLtJ_P0055377 Timm10 protein_coding protein_coding MGP_NODShiLtJ_T0055378.1 MGP_NODShiLtJ_G0025748.1 mouse_genomes_project 2 93643055 93645765 + MGP_NODShiLtJ_P0055378 Timm10 protein_coding protein_coding MGP_NODShiLtJ_T0053217.1 MGP_NODShiLtJ_G0025355.1 mouse_genomes_project 2 27710627 27876004 + MGP_NODShiLtJ_P0053217 Col5a1 protein_coding protein_coding MGP_NODShiLtJ_T0053218.1 MGP_NODShiLtJ_G0025355.1 mouse_genomes_project 2 27851857 27871431 + MGP_NODShiLtJ_P0053218 Col5a1 protein_coding protein_coding MGP_NODShiLtJ_T0003855.1 MGP_NODShiLtJ_G0003443.1 mouse_genomes_project 2 19323842 19347772 - Gm17171 antisense antisense MGP_NODShiLtJ_T0054610.1 MGP_NODShiLtJ_G0025596.1 mouse_genomes_project 2 65552543 65594067 - MGP_NODShiLtJ_P0054610 Cd302 protein_coding protein_coding MGP_NODShiLtJ_T0054611.1 MGP_NODShiLtJ_G0025596.1 mouse_genomes_project 2 65552543 65593997 - MGP_NODShiLtJ_P0054611 Cd302 protein_coding protein_coding MGP_NODShiLtJ_T0013737.1 MGP_NODShiLtJ_G0011845.1 mouse_genomes_project 2 183066955 183067585 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013544.1 MGP_NODShiLtJ_G0011652.1 mouse_genomes_project 2 102143415 102144952 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013311.1 MGP_NODShiLtJ_G0011419.1 mouse_genomes_project 2 12909408 12911767 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013386.1 MGP_NODShiLtJ_G0011494.1 mouse_genomes_project 2 40134022 40134385 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057959.1 MGP_NODShiLtJ_G0026471.1 mouse_genomes_project 2 171279645 171285190 + MGP_NODShiLtJ_P0057959 Tcf15 protein_coding protein_coding MGP_NODShiLtJ_T0055082.1 MGP_NODShiLtJ_G0025683.1 mouse_genomes_project 2 81958087 81960784 + MGP_NODShiLtJ_P0055082 Hoxd12 protein_coding protein_coding MGP_NODShiLtJ_T0056345.1 MGP_NODShiLtJ_G0026096.1 mouse_genomes_project 2 126812412 126813348 - MGP_NODShiLtJ_P0056345 Olfr1313 protein_coding protein_coding MGP_NODShiLtJ_T0055180.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 84911337 85247464 - MGP_NODShiLtJ_P0055180 Zfp385b protein_coding protein_coding MGP_NODShiLtJ_T0055181.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 84911337 85024002 - MGP_NODShiLtJ_P0055181 Zfp385b protein_coding protein_coding MGP_NODShiLtJ_T0055182.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 84911337 85227700 - MGP_NODShiLtJ_P0055182 Zfp385b protein_coding protein_coding MGP_NODShiLtJ_T0055183.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 84911802 85351328 - MGP_NODShiLtJ_P0055183 Zfp385b protein_coding protein_coding MGP_NODShiLtJ_T0055184.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 84916614 85023998 - Zfp385b protein_coding processed_transcript MGP_NODShiLtJ_T0055185.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 84953140 85227700 - Zfp385b protein_coding processed_transcript MGP_NODShiLtJ_T0055186.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 84973699 85023919 - Zfp385b protein_coding processed_transcript MGP_NODShiLtJ_T0055187.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 85004685 85227807 - Zfp385b protein_coding processed_transcript MGP_NODShiLtJ_T0055188.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 85032352 85351771 - MGP_NODShiLtJ_P0055188 Zfp385b protein_coding protein_coding MGP_NODShiLtJ_T0055189.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 85033103 85073200 - Zfp385b protein_coding processed_transcript MGP_NODShiLtJ_T0055190.1 MGP_NODShiLtJ_G0025710.1 mouse_genomes_project 2 85351748 85355188 - Zfp385b protein_coding processed_transcript MGP_NODShiLtJ_T0017740.1 MGP_NODShiLtJ_G0015348.1 mouse_genomes_project 2 172578326 172583072 - 2500004C02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017741.1 MGP_NODShiLtJ_G0015348.1 mouse_genomes_project 2 172579769 172580486 - 2500004C02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017742.1 MGP_NODShiLtJ_G0015348.1 mouse_genomes_project 2 172579899 172583335 - 2500004C02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0013579.1 MGP_NODShiLtJ_G0011687.1 mouse_genomes_project 2 117047300 117047582 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059478.1 MGP_NODShiLtJ_G0026824.1 mouse_genomes_project 2 202548972 202579614 + MGP_NODShiLtJ_P0059478 Col20a1 protein_coding protein_coding MGP_NODShiLtJ_T0059479.1 MGP_NODShiLtJ_G0026824.1 mouse_genomes_project 2 202548972 202580826 + MGP_NODShiLtJ_P0059479 Col20a1 protein_coding protein_coding MGP_NODShiLtJ_T0059480.1 MGP_NODShiLtJ_G0026824.1 mouse_genomes_project 2 202551504 202579614 + MGP_NODShiLtJ_P0059480 Col20a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059481.1 MGP_NODShiLtJ_G0026824.1 mouse_genomes_project 2 202563747 202566752 + MGP_NODShiLtJ_P0059481 Col20a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059482.1 MGP_NODShiLtJ_G0026824.1 mouse_genomes_project 2 202576545 202580826 + MGP_NODShiLtJ_P0059482 Col20a1 protein_coding protein_coding MGP_NODShiLtJ_T0004073.1 MGP_NODShiLtJ_G0003597.1 mouse_genomes_project 2 171202108 171204070 - AA387200 antisense antisense MGP_NODShiLtJ_T0052406.1 MGP_NODShiLtJ_G0025208.1 mouse_genomes_project 2 16710860 16711402 - MGP_NODShiLtJ_P0052406 H2afb1 protein_coding protein_coding MGP_NODShiLtJ_T0013647.1 MGP_NODShiLtJ_G0011755.1 mouse_genomes_project 2 147602931 147603365 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058922.1 MGP_NODShiLtJ_G0026700.1 mouse_genomes_project 2 185250527 185271767 - MGP_NODShiLtJ_P0058922 Zfp335 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058923.1 MGP_NODShiLtJ_G0026700.1 mouse_genomes_project 2 185250527 185271767 - MGP_NODShiLtJ_P0058923 Zfp335 protein_coding protein_coding MGP_NODShiLtJ_T0058924.1 MGP_NODShiLtJ_G0026700.1 mouse_genomes_project 2 185261407 185267675 - MGP_NODShiLtJ_P0058924 Zfp335 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007074.1 MGP_NODShiLtJ_G0005797.1 mouse_genomes_project 2 4841722 4843073 + Gm28641 lincRNA lincRNA MGP_NODShiLtJ_T0013395.1 MGP_NODShiLtJ_G0011503.1 mouse_genomes_project 2 41321542 41322059 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011405.1 MGP_NODShiLtJ_G0009538.1 mouse_genomes_project 2 160519030 160519334 + Gm23179 misc_RNA misc_RNA MGP_NODShiLtJ_T0017663.1 MGP_NODShiLtJ_G0015313.1 mouse_genomes_project 2 103894357 103955263 - Gm13791 processed_transcript processed_transcript MGP_NODShiLtJ_T0055293.1 MGP_NODShiLtJ_G0025730.1 mouse_genomes_project 2 92457954 92531059 + MGP_NODShiLtJ_P0055293 Fam171b protein_coding protein_coding MGP_NODShiLtJ_T0055294.1 MGP_NODShiLtJ_G0025730.1 mouse_genomes_project 2 92507878 92510256 + Fam171b protein_coding processed_transcript MGP_NODShiLtJ_T0101816.1 MGP_NODShiLtJ_G0039984.1 mouse_genomes_project 2 96065493 96066435 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0056997.1 MGP_NODShiLtJ_G0026236.1 mouse_genomes_project 2 138621583 138648511 - MGP_NODShiLtJ_P0056997 Slc30a4 protein_coding protein_coding MGP_NODShiLtJ_T0056998.1 MGP_NODShiLtJ_G0026236.1 mouse_genomes_project 2 138627841 138648535 - MGP_NODShiLtJ_P0056998 Slc30a4 protein_coding protein_coding MGP_NODShiLtJ_T0057302.1 MGP_NODShiLtJ_G0026311.1 mouse_genomes_project 2 146646135 146693895 + Tgm6 protein_coding processed_transcript MGP_NODShiLtJ_T0057303.1 MGP_NODShiLtJ_G0026311.1 mouse_genomes_project 2 146657786 146693895 + Tgm6 protein_coding processed_transcript MGP_NODShiLtJ_T0057304.1 MGP_NODShiLtJ_G0026311.1 mouse_genomes_project 2 146657786 146693895 + MGP_NODShiLtJ_P0057304 Tgm6 protein_coding protein_coding MGP_NODShiLtJ_T0013720.1 MGP_NODShiLtJ_G0011828.1 mouse_genomes_project 2 176392279 176392871 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057823.1 MGP_NODShiLtJ_G0026428.1 mouse_genomes_project 2 167321030 167363748 - MGP_NODShiLtJ_P0057823 Napb protein_coding protein_coding MGP_NODShiLtJ_T0057824.1 MGP_NODShiLtJ_G0026428.1 mouse_genomes_project 2 167321031 167363694 - MGP_NODShiLtJ_P0057824 Napb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057825.1 MGP_NODShiLtJ_G0026428.1 mouse_genomes_project 2 167334834 167363672 - Napb protein_coding retained_intron MGP_NODShiLtJ_T0058818.1 MGP_NODShiLtJ_G0026668.1 mouse_genomes_project 2 184697889 184709515 + Rbpjl protein_coding retained_intron MGP_NODShiLtJ_T0058819.1 MGP_NODShiLtJ_G0026668.1 mouse_genomes_project 2 184697942 184710179 + MGP_NODShiLtJ_P0058819 Rbpjl protein_coding protein_coding MGP_NODShiLtJ_T0058820.1 MGP_NODShiLtJ_G0026668.1 mouse_genomes_project 2 184697957 184706104 + Rbpjl protein_coding processed_transcript MGP_NODShiLtJ_T0099150.1 MGP_NODShiLtJ_G0037544.1 mouse_genomes_project 2 203122628 203122791 + Gm25184 snRNA snRNA MGP_NODShiLtJ_T0054508.1 MGP_NODShiLtJ_G0025580.1 mouse_genomes_project 2 62312541 62452474 + Gpd2 protein_coding processed_transcript MGP_NODShiLtJ_T0054509.1 MGP_NODShiLtJ_G0025580.1 mouse_genomes_project 2 62312584 62455339 + MGP_NODShiLtJ_P0054509 Gpd2 protein_coding protein_coding MGP_NODShiLtJ_T0054510.1 MGP_NODShiLtJ_G0025580.1 mouse_genomes_project 2 62313203 62455339 + MGP_NODShiLtJ_P0054510 Gpd2 protein_coding protein_coding MGP_NODShiLtJ_T0054511.1 MGP_NODShiLtJ_G0025580.1 mouse_genomes_project 2 62313288 62455339 + MGP_NODShiLtJ_P0054511 Gpd2 protein_coding protein_coding MGP_NODShiLtJ_T0054512.1 MGP_NODShiLtJ_G0025580.1 mouse_genomes_project 2 62319272 62387439 + Gpd2 protein_coding processed_transcript MGP_NODShiLtJ_T0054513.1 MGP_NODShiLtJ_G0025580.1 mouse_genomes_project 2 62340698 62343672 + Gpd2 protein_coding processed_transcript MGP_NODShiLtJ_T0054514.1 MGP_NODShiLtJ_G0025580.1 mouse_genomes_project 2 62342941 62343672 + Gpd2 protein_coding processed_transcript MGP_NODShiLtJ_T0053696.1 MGP_NODShiLtJ_G0025429.1 mouse_genomes_project 2 32003026 32041224 - MGP_NODShiLtJ_P0053696 Fibcd1 protein_coding protein_coding MGP_NODShiLtJ_T0052184.1 MGP_NODShiLtJ_G0025174.1 mouse_genomes_project 2 7736560 7879365 - MGP_NODShiLtJ_P0052184 Taf3 protein_coding protein_coding MGP_NODShiLtJ_T0052185.1 MGP_NODShiLtJ_G0025174.1 mouse_genomes_project 2 7737302 7764795 - Taf3 protein_coding processed_transcript MGP_NODShiLtJ_T0052186.1 MGP_NODShiLtJ_G0025174.1 mouse_genomes_project 2 7738087 7740846 - MGP_NODShiLtJ_P0052186 Taf3 protein_coding protein_coding MGP_NODShiLtJ_T0052187.1 MGP_NODShiLtJ_G0025174.1 mouse_genomes_project 2 7738089 7740420 - MGP_NODShiLtJ_P0052187 Taf3 protein_coding protein_coding MGP_NODShiLtJ_T0054803.1 MGP_NODShiLtJ_G0025629.1 mouse_genomes_project 2 75817189 75877554 + MGP_NODShiLtJ_P0054803 Nostrin protein_coding protein_coding MGP_NODShiLtJ_T0054804.1 MGP_NODShiLtJ_G0025629.1 mouse_genomes_project 2 75866672 75873795 + Nostrin protein_coding processed_transcript MGP_NODShiLtJ_T0057965.1 MGP_NODShiLtJ_G0026473.1 mouse_genomes_project 2 171424925 171447852 + MGP_NODShiLtJ_P0057965 Tbc1d20 protein_coding protein_coding MGP_NODShiLtJ_T0057966.1 MGP_NODShiLtJ_G0026473.1 mouse_genomes_project 2 171424948 171441937 + MGP_NODShiLtJ_P0057966 Tbc1d20 protein_coding protein_coding MGP_NODShiLtJ_T0057967.1 MGP_NODShiLtJ_G0026473.1 mouse_genomes_project 2 171424969 171447852 + Tbc1d20 protein_coding retained_intron MGP_NODShiLtJ_T0057968.1 MGP_NODShiLtJ_G0026473.1 mouse_genomes_project 2 171425277 171442283 + MGP_NODShiLtJ_P0057968 Tbc1d20 protein_coding protein_coding MGP_NODShiLtJ_T0057969.1 MGP_NODShiLtJ_G0026473.1 mouse_genomes_project 2 171442053 171444680 + Tbc1d20 protein_coding retained_intron MGP_NODShiLtJ_T0053789.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32601036 32627663 + MGP_NODShiLtJ_P0053789 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053790.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32612542 32616940 + Ciz1 protein_coding processed_transcript MGP_NODShiLtJ_T0053791.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32612542 32617061 + MGP_NODShiLtJ_P0053791 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053792.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32612593 32619655 + MGP_NODShiLtJ_P0053792 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053793.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32612730 32627669 + MGP_NODShiLtJ_P0053793 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053794.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32612730 32627663 + MGP_NODShiLtJ_P0053794 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053795.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32612885 32630335 + Ciz1 protein_coding retained_intron MGP_NODShiLtJ_T0053796.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32612965 32615384 + Ciz1 protein_coding processed_transcript MGP_NODShiLtJ_T0053797.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32613086 32619856 + MGP_NODShiLtJ_P0053797 Ciz1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053798.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32613288 32614520 + Ciz1 protein_coding retained_intron MGP_NODShiLtJ_T0053799.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32613337 32627669 + MGP_NODShiLtJ_P0053799 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053800.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32613342 32627664 + MGP_NODShiLtJ_P0053800 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053801.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32614877 32617047 + Ciz1 protein_coding retained_intron MGP_NODShiLtJ_T0053802.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32616944 32620826 + MGP_NODShiLtJ_P0053802 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053803.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32617004 32621838 + MGP_NODShiLtJ_P0053803 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053804.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32619594 32621283 + Ciz1 protein_coding processed_transcript MGP_NODShiLtJ_T0053805.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32620441 32624902 + MGP_NODShiLtJ_P0053805 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0053806.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32621367 32623920 + Ciz1 protein_coding retained_intron MGP_NODShiLtJ_T0053807.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32621849 32624364 + Ciz1 protein_coding retained_intron MGP_NODShiLtJ_T0053808.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32623572 32627665 + Ciz1 protein_coding retained_intron MGP_NODShiLtJ_T0053809.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32624471 32625754 + Ciz1 protein_coding retained_intron MGP_NODShiLtJ_T0053810.1 MGP_NODShiLtJ_G0025441.1 mouse_genomes_project 2 32624852 32629591 + MGP_NODShiLtJ_P0053810 Ciz1 protein_coding protein_coding MGP_NODShiLtJ_T0052939.1 MGP_NODShiLtJ_G0025308.1 mouse_genomes_project 2 25471847 25475110 + MGP_NODShiLtJ_P0052939 Lcn11 protein_coding protein_coding MGP_NODShiLtJ_T0052916.1 MGP_NODShiLtJ_G0025298.1 mouse_genomes_project 2 25297459 25299398 - MGP_NODShiLtJ_P0052916 Tmem141 protein_coding protein_coding MGP_NODShiLtJ_T0052917.1 MGP_NODShiLtJ_G0025298.1 mouse_genomes_project 2 25297459 25299378 - MGP_NODShiLtJ_P0052917 Tmem141 protein_coding protein_coding MGP_NODShiLtJ_T0052918.1 MGP_NODShiLtJ_G0025298.1 mouse_genomes_project 2 25297496 25299356 - Tmem141 protein_coding processed_transcript MGP_NODShiLtJ_T0052919.1 MGP_NODShiLtJ_G0025298.1 mouse_genomes_project 2 25297719 25299173 - Tmem141 protein_coding processed_transcript MGP_NODShiLtJ_T0052920.1 MGP_NODShiLtJ_G0025298.1 mouse_genomes_project 2 25298439 25299364 - Tmem141 protein_coding processed_transcript MGP_NODShiLtJ_T0052921.1 MGP_NODShiLtJ_G0025298.1 mouse_genomes_project 2 25298439 25299361 - Tmem141 protein_coding processed_transcript MGP_NODShiLtJ_T0052922.1 MGP_NODShiLtJ_G0025298.1 mouse_genomes_project 2 25298886 25299300 - Tmem141 protein_coding processed_transcript MGP_NODShiLtJ_T0007086.1 MGP_NODShiLtJ_G0005807.1 mouse_genomes_project 2 10776043 10785478 + Gm37565 lincRNA lincRNA MGP_NODShiLtJ_T0057305.1 MGP_NODShiLtJ_G0026312.1 mouse_genomes_project 2 146713633 146721530 - Snrpb protein_coding retained_intron MGP_NODShiLtJ_T0057306.1 MGP_NODShiLtJ_G0026312.1 mouse_genomes_project 2 146713854 146721630 - MGP_NODShiLtJ_P0057306 Snrpb protein_coding protein_coding MGP_NODShiLtJ_T0057307.1 MGP_NODShiLtJ_G0026312.1 mouse_genomes_project 2 146714006 146721630 - MGP_NODShiLtJ_P0057307 Snrpb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057308.1 MGP_NODShiLtJ_G0026312.1 mouse_genomes_project 2 146719078 146721561 - Snrpb protein_coding retained_intron MGP_NODShiLtJ_T0013434.1 MGP_NODShiLtJ_G0011542.1 mouse_genomes_project 2 62295575 62295764 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057042.1 MGP_NODShiLtJ_G0026244.1 mouse_genomes_project 2 141472205 141483526 + MGP_NODShiLtJ_P0057042 Dut protein_coding protein_coding MGP_NODShiLtJ_T0057043.1 MGP_NODShiLtJ_G0026244.1 mouse_genomes_project 2 141472497 141484396 + MGP_NODShiLtJ_P0057043 Dut protein_coding protein_coding MGP_NODShiLtJ_T0057044.1 MGP_NODShiLtJ_G0026244.1 mouse_genomes_project 2 141472915 141474042 + Dut protein_coding processed_transcript MGP_NODShiLtJ_T0101834.1 MGP_NODShiLtJ_G0040002.1 mouse_genomes_project 2 101146076 101197415 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0056271.1 MGP_NODShiLtJ_G0026059.1 mouse_genomes_project 2 120571182 120575890 - MGP_NODShiLtJ_P0056271 Fshb protein_coding protein_coding MGP_NODShiLtJ_T0017683.1 MGP_NODShiLtJ_G0015322.1 mouse_genomes_project 2 128292598 128304126 + Gm13965 processed_transcript processed_transcript MGP_NODShiLtJ_T0054207.1 MGP_NODShiLtJ_G0025528.1 mouse_genomes_project 2 38028634 38029618 + MGP_NODShiLtJ_P0054207 Olfr368 protein_coding protein_coding MGP_NODShiLtJ_T0055435.1 MGP_NODShiLtJ_G0025771.1 mouse_genomes_project 2 94781115 94782054 + MGP_NODShiLtJ_P0055435 Olfr1015 protein_coding protein_coding MGP_NODShiLtJ_T0054198.1 MGP_NODShiLtJ_G0025520.1 mouse_genomes_project 2 37592294 37593242 + MGP_NODShiLtJ_P0054198 Olfr356 protein_coding protein_coding MGP_NODShiLtJ_T0004095.1 MGP_NODShiLtJ_G0003618.1 mouse_genomes_project 2 183687694 183688743 + 2310001K24Rik antisense antisense MGP_NODShiLtJ_T0004096.1 MGP_NODShiLtJ_G0003618.1 mouse_genomes_project 2 183688282 183688741 + 2310001K24Rik antisense antisense MGP_NODShiLtJ_T0054849.1 MGP_NODShiLtJ_G0025639.1 mouse_genomes_project 2 76567734 76609181 - MGP_NODShiLtJ_P0054849 Ccdc173 protein_coding protein_coding MGP_NODShiLtJ_T0054850.1 MGP_NODShiLtJ_G0025639.1 mouse_genomes_project 2 76599266 76600324 - Ccdc173 protein_coding processed_transcript MGP_NODShiLtJ_T0055615.1 MGP_NODShiLtJ_G0025932.1 mouse_genomes_project 2 100255382 100256328 - MGP_NODShiLtJ_P0055615 protein_coding protein_coding MGP_NODShiLtJ_T0059452.1 MGP_NODShiLtJ_G0026820.1 mouse_genomes_project 2 202463820 202481538 - MGP_NODShiLtJ_P0059452 Ythdf1 protein_coding protein_coding MGP_NODShiLtJ_T0059453.1 MGP_NODShiLtJ_G0026820.1 mouse_genomes_project 2 202464816 202481538 - MGP_NODShiLtJ_P0059453 Ythdf1 protein_coding protein_coding MGP_NODShiLtJ_T0059454.1 MGP_NODShiLtJ_G0026820.1 mouse_genomes_project 2 202472558 202480976 - MGP_NODShiLtJ_P0059454 Ythdf1 protein_coding protein_coding MGP_NODShiLtJ_T0100345.1 MGP_NODShiLtJ_G0038739.1 mouse_genomes_project 2 22088186 22088306 + Gm25544 snoRNA snoRNA MGP_NODShiLtJ_T0013575.1 MGP_NODShiLtJ_G0011683.1 mouse_genomes_project 2 116379219 116379646 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057503.1 MGP_NODShiLtJ_G0026354.1 mouse_genomes_project 2 148703280 148745632 - MGP_NODShiLtJ_P0057503 Rassf2 protein_coding protein_coding MGP_NODShiLtJ_T0057504.1 MGP_NODShiLtJ_G0026354.1 mouse_genomes_project 2 148706715 148745833 - MGP_NODShiLtJ_P0057504 Rassf2 protein_coding protein_coding MGP_NODShiLtJ_T0057505.1 MGP_NODShiLtJ_G0026354.1 mouse_genomes_project 2 148716294 148736803 - Rassf2 protein_coding retained_intron MGP_NODShiLtJ_T0057506.1 MGP_NODShiLtJ_G0026354.1 mouse_genomes_project 2 148718575 148745889 - MGP_NODShiLtJ_P0057506 Rassf2 protein_coding protein_coding MGP_NODShiLtJ_T0057507.1 MGP_NODShiLtJ_G0026354.1 mouse_genomes_project 2 148725373 148744797 - MGP_NODShiLtJ_P0057507 Rassf2 protein_coding protein_coding MGP_NODShiLtJ_T0013695.1 MGP_NODShiLtJ_G0011803.1 mouse_genomes_project 2 168994901 168995896 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053975.1 MGP_NODShiLtJ_G0025469.1 mouse_genomes_project 2 33435150 33649937 - MGP_NODShiLtJ_P0053975 Ralgps1 protein_coding protein_coding MGP_NODShiLtJ_T0053976.1 MGP_NODShiLtJ_G0025469.1 mouse_genomes_project 2 33435154 33649937 - MGP_NODShiLtJ_P0053976 Ralgps1 protein_coding protein_coding MGP_NODShiLtJ_T0053977.1 MGP_NODShiLtJ_G0025469.1 mouse_genomes_project 2 33435154 33649937 - MGP_NODShiLtJ_P0053977 Ralgps1 protein_coding protein_coding MGP_NODShiLtJ_T0053978.1 MGP_NODShiLtJ_G0025469.1 mouse_genomes_project 2 33438700 33649937 - MGP_NODShiLtJ_P0053978 Ralgps1 protein_coding protein_coding MGP_NODShiLtJ_T0053979.1 MGP_NODShiLtJ_G0025469.1 mouse_genomes_project 2 33445034 33459878 - Ralgps1 protein_coding processed_transcript MGP_NODShiLtJ_T0053984.1 MGP_NODShiLtJ_G0025469.1 mouse_genomes_project 2 33562703 33649937 - Ralgps1 protein_coding retained_intron MGP_NODShiLtJ_T0054711.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71264234 71428499 - MGP_NODShiLtJ_P0054711 Cobll1 protein_coding protein_coding MGP_NODShiLtJ_T0054712.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71264245 71428499 - MGP_NODShiLtJ_P0054712 Cobll1 protein_coding protein_coding MGP_NODShiLtJ_T0054713.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71264245 71428446 - MGP_NODShiLtJ_P0054713 Cobll1 protein_coding protein_coding MGP_NODShiLtJ_T0054714.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71264245 71428594 - MGP_NODShiLtJ_P0054714 Cobll1 protein_coding protein_coding MGP_NODShiLtJ_T0054715.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71264245 71428499 - MGP_NODShiLtJ_P0054715 Cobll1 protein_coding protein_coding MGP_NODShiLtJ_T0054716.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71275157 71282532 - Cobll1 protein_coding processed_transcript MGP_NODShiLtJ_T0054717.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71306376 71428917 - MGP_NODShiLtJ_P0054717 Cobll1 protein_coding protein_coding MGP_NODShiLtJ_T0054718.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71313980 71428969 - MGP_NODShiLtJ_P0054718 Cobll1 protein_coding protein_coding MGP_NODShiLtJ_T0054719.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71316552 71425012 - Cobll1 protein_coding processed_transcript MGP_NODShiLtJ_T0054720.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71316585 71428446 - MGP_NODShiLtJ_P0054720 Cobll1 protein_coding protein_coding MGP_NODShiLtJ_T0054721.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71329113 71428920 - Cobll1 protein_coding processed_transcript MGP_NODShiLtJ_T0054722.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71331669 71429276 - Cobll1 protein_coding processed_transcript MGP_NODShiLtJ_T0054723.1 MGP_NODShiLtJ_G0025613.1 mouse_genomes_project 2 71331833 71428347 - Cobll1 protein_coding processed_transcript MGP_NODShiLtJ_T0057946.1 MGP_NODShiLtJ_G0026466.1 mouse_genomes_project 2 171023044 171056927 + MGP_NODShiLtJ_P0057946 Angpt4 protein_coding protein_coding MGP_NODShiLtJ_T0055475.1 MGP_NODShiLtJ_G0025810.1 mouse_genomes_project 2 96087081 96088014 - MGP_NODShiLtJ_P0055475 Olfr1086 protein_coding protein_coding MGP_NODShiLtJ_T0013380.1 MGP_NODShiLtJ_G0011488.1 mouse_genomes_project 2 38409127 38409503 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057719.1 MGP_NODShiLtJ_G0026403.1 mouse_genomes_project 2 162794581 162858327 - MGP_NODShiLtJ_P0057719 Dzank1 protein_coding protein_coding MGP_NODShiLtJ_T0057720.1 MGP_NODShiLtJ_G0026403.1 mouse_genomes_project 2 162794583 162858343 - MGP_NODShiLtJ_P0057720 Dzank1 protein_coding protein_coding MGP_NODShiLtJ_T0057721.1 MGP_NODShiLtJ_G0026403.1 mouse_genomes_project 2 162836438 162858293 - Dzank1 protein_coding retained_intron MGP_NODShiLtJ_T0057722.1 MGP_NODShiLtJ_G0026403.1 mouse_genomes_project 2 162852296 162857577 - Dzank1 protein_coding processed_transcript MGP_NODShiLtJ_T0013761.1 MGP_NODShiLtJ_G0011869.1 mouse_genomes_project 2 200676155 200676742 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013620.1 MGP_NODShiLtJ_G0011728.1 mouse_genomes_project 2 135066564 135068141 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003951.1 MGP_NODShiLtJ_G0003515.1 mouse_genomes_project 2 79304373 79308016 - Rapgef4os3 antisense antisense MGP_NODShiLtJ_T0011392.1 MGP_NODShiLtJ_G0009525.1 mouse_genomes_project 2 75133780 75134022 + Gm26321 misc_RNA misc_RNA MGP_NODShiLtJ_T0010240.1 MGP_NODShiLtJ_G0008373.1 mouse_genomes_project 2 8307051 8307148 + Mir669b miRNA miRNA MGP_NODShiLtJ_T0003980.1 MGP_NODShiLtJ_G0003534.1 mouse_genomes_project 2 101279881 101285754 + 4933423P22Rik antisense antisense MGP_NODShiLtJ_T0003981.1 MGP_NODShiLtJ_G0003534.1 mouse_genomes_project 2 101279895 101291326 + 4933423P22Rik antisense antisense MGP_NODShiLtJ_T0059395.1 MGP_NODShiLtJ_G0026805.1 mouse_genomes_project 2 201683642 201686913 - Lama5 protein_coding processed_transcript MGP_NODShiLtJ_T0059396.1 MGP_NODShiLtJ_G0026805.1 mouse_genomes_project 2 201683642 201734828 - MGP_NODShiLtJ_P0059396 Lama5 protein_coding protein_coding MGP_NODShiLtJ_T0059397.1 MGP_NODShiLtJ_G0026805.1 mouse_genomes_project 2 201683723 201684857 - Lama5 protein_coding processed_transcript MGP_NODShiLtJ_T0059398.1 MGP_NODShiLtJ_G0026805.1 mouse_genomes_project 2 201684437 201685673 - Lama5 protein_coding processed_transcript MGP_NODShiLtJ_T0054731.1 MGP_NODShiLtJ_G0025615.1 mouse_genomes_project 2 71678330 71799326 - MGP_NODShiLtJ_P0054731 protein_coding protein_coding MGP_NODShiLtJ_T0054732.1 MGP_NODShiLtJ_G0025615.1 mouse_genomes_project 2 71679465 71799456 - MGP_NODShiLtJ_P0054732 protein_coding protein_coding MGP_NODShiLtJ_T0054733.1 MGP_NODShiLtJ_G0025615.1 mouse_genomes_project 2 71721468 71727958 - protein_coding processed_transcript MGP_NODShiLtJ_T0054734.1 MGP_NODShiLtJ_G0025615.1 mouse_genomes_project 2 71754732 71761742 - MGP_NODShiLtJ_P0054734 protein_coding protein_coding MGP_NODShiLtJ_T0055525.1 MGP_NODShiLtJ_G0025851.1 mouse_genomes_project 2 97603481 97604414 - MGP_NODShiLtJ_P0055525 Olfr1136 protein_coding protein_coding MGP_NODShiLtJ_T0058730.1 MGP_NODShiLtJ_G0026639.1 mouse_genomes_project 2 183404853 183532846 + MGP_NODShiLtJ_P0058730 Tox2 protein_coding protein_coding MGP_NODShiLtJ_T0058731.1 MGP_NODShiLtJ_G0026639.1 mouse_genomes_project 2 183406281 183480161 + MGP_NODShiLtJ_P0058731 Tox2 protein_coding protein_coding MGP_NODShiLtJ_T0058732.1 MGP_NODShiLtJ_G0026639.1 mouse_genomes_project 2 183428464 183531978 + MGP_NODShiLtJ_P0058732 Tox2 protein_coding protein_coding MGP_NODShiLtJ_T0058733.1 MGP_NODShiLtJ_G0026639.1 mouse_genomes_project 2 183428555 183531778 + MGP_NODShiLtJ_P0058733 Tox2 protein_coding protein_coding MGP_NODShiLtJ_T0058734.1 MGP_NODShiLtJ_G0026639.1 mouse_genomes_project 2 183529053 183531778 + MGP_NODShiLtJ_P0058734 Tox2 protein_coding protein_coding MGP_NODShiLtJ_T0054910.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77882345 77982217 - MGP_NODShiLtJ_P0054910 Mettl8 protein_coding protein_coding MGP_NODShiLtJ_T0054911.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77882352 77982241 - MGP_NODShiLtJ_P0054911 Mettl8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054912.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77882352 77982241 - MGP_NODShiLtJ_P0054912 Mettl8 protein_coding protein_coding MGP_NODShiLtJ_T0054913.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77882352 77982241 - MGP_NODShiLtJ_P0054913 Mettl8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054914.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77883952 77891226 - MGP_NODShiLtJ_P0054914 Mettl8 protein_coding protein_coding MGP_NODShiLtJ_T0054915.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77884270 77900073 - MGP_NODShiLtJ_P0054915 Mettl8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054916.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77884831 77893978 - Mettl8 protein_coding retained_intron MGP_NODShiLtJ_T0054917.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77896473 77982230 - MGP_NODShiLtJ_P0054917 Mettl8 protein_coding protein_coding MGP_NODShiLtJ_T0054918.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77898941 77982241 - Mettl8 protein_coding retained_intron MGP_NODShiLtJ_T0054919.1 MGP_NODShiLtJ_G0025652.1 mouse_genomes_project 2 77911227 77944305 - Mettl8 protein_coding retained_intron MGP_NODShiLtJ_T0056960.1 MGP_NODShiLtJ_G0026224.1 mouse_genomes_project 2 137969930 137992085 + MGP_NODShiLtJ_P0056960 Trim69 protein_coding protein_coding MGP_NODShiLtJ_T0056961.1 MGP_NODShiLtJ_G0026224.1 mouse_genomes_project 2 137970032 137992082 + Trim69 protein_coding processed_transcript MGP_NODShiLtJ_T0056274.1 MGP_NODShiLtJ_G0026061.1 mouse_genomes_project 2 123102096 123349588 - MGP_NODShiLtJ_P0056274 Mettl15 protein_coding protein_coding MGP_NODShiLtJ_T0056275.1 MGP_NODShiLtJ_G0026061.1 mouse_genomes_project 2 123102099 123349578 - Mettl15 protein_coding processed_transcript MGP_NODShiLtJ_T0056276.1 MGP_NODShiLtJ_G0026061.1 mouse_genomes_project 2 123154591 123352046 - MGP_NODShiLtJ_P0056276 Mettl15 protein_coding protein_coding MGP_NODShiLtJ_T0056277.1 MGP_NODShiLtJ_G0026061.1 mouse_genomes_project 2 123295258 123352024 - Mettl15 protein_coding retained_intron MGP_NODShiLtJ_T0056278.1 MGP_NODShiLtJ_G0026061.1 mouse_genomes_project 2 123295323 123352000 - Mettl15 protein_coding processed_transcript MGP_NODShiLtJ_T0058868.1 MGP_NODShiLtJ_G0026688.1 mouse_genomes_project 2 185089237 185114515 + MGP_NODShiLtJ_P0058868 Dnttip1 protein_coding protein_coding MGP_NODShiLtJ_T0058869.1 MGP_NODShiLtJ_G0026688.1 mouse_genomes_project 2 185089268 185094808 + MGP_NODShiLtJ_P0058869 Dnttip1 protein_coding protein_coding MGP_NODShiLtJ_T0058870.1 MGP_NODShiLtJ_G0026688.1 mouse_genomes_project 2 185089285 185104972 + MGP_NODShiLtJ_P0058870 Dnttip1 protein_coding protein_coding MGP_NODShiLtJ_T0058871.1 MGP_NODShiLtJ_G0026688.1 mouse_genomes_project 2 185097558 185102971 + Dnttip1 protein_coding retained_intron MGP_NODShiLtJ_T0052526.1 MGP_NODShiLtJ_G0025229.1 mouse_genomes_project 2 21776385 21854954 + MGP_NODShiLtJ_P0052526 Gad2 protein_coding protein_coding MGP_NODShiLtJ_T0052527.1 MGP_NODShiLtJ_G0025229.1 mouse_genomes_project 2 21777537 21785222 + Gad2 protein_coding processed_transcript MGP_NODShiLtJ_T0013542.1 MGP_NODShiLtJ_G0011650.1 mouse_genomes_project 2 99610231 99611038 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010288.1 MGP_NODShiLtJ_G0008421.1 mouse_genomes_project 2 29449265 29449345 - Mir133c miRNA miRNA MGP_NODShiLtJ_T0056045.1 MGP_NODShiLtJ_G0026014.1 mouse_genomes_project 2 114682782 114694024 - MGP_NODShiLtJ_P0056045 Rag1 protein_coding protein_coding MGP_NODShiLtJ_T0007309.1 MGP_NODShiLtJ_G0005984.1 mouse_genomes_project 2 176027475 176030072 - Gm14225 lincRNA lincRNA MGP_NODShiLtJ_T0054225.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38166778 38224649 + MGP_NODShiLtJ_P0054225 Rabgap1 protein_coding protein_coding MGP_NODShiLtJ_T0054226.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38166784 38298366 + MGP_NODShiLtJ_P0054226 Rabgap1 protein_coding protein_coding MGP_NODShiLtJ_T0054227.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38166795 38217256 + Rabgap1 protein_coding retained_intron MGP_NODShiLtJ_T0054228.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38175165 38177318 + Rabgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0054229.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38175774 38204424 + MGP_NODShiLtJ_P0054229 Rabgap1 protein_coding protein_coding MGP_NODShiLtJ_T0054230.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38175774 38276263 + MGP_NODShiLtJ_P0054230 Rabgap1 protein_coding protein_coding MGP_NODShiLtJ_T0054231.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38175796 38298383 + MGP_NODShiLtJ_P0054231 Rabgap1 protein_coding protein_coding MGP_NODShiLtJ_T0054233.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38219902 38223006 + Rabgap1 protein_coding retained_intron MGP_NODShiLtJ_T0054234.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38220990 38239797 + Rabgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0054236.1 MGP_NODShiLtJ_G0025533.1 mouse_genomes_project 2 38247991 38296982 + Rabgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0013461.1 MGP_NODShiLtJ_G0011569.1 mouse_genomes_project 2 72883961 72885124 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055101.1 MGP_NODShiLtJ_G0025692.1 mouse_genomes_project 2 82119231 82201615 + MGP_NODShiLtJ_P0055101 Mtx2 protein_coding protein_coding MGP_NODShiLtJ_T0055102.1 MGP_NODShiLtJ_G0025692.1 mouse_genomes_project 2 82119258 82182271 + Mtx2 protein_coding retained_intron MGP_NODShiLtJ_T0055103.1 MGP_NODShiLtJ_G0025692.1 mouse_genomes_project 2 82182437 82199688 + Mtx2 protein_coding retained_intron MGP_NODShiLtJ_T0052978.1 MGP_NODShiLtJ_G0025315.1 mouse_genomes_project 2 25772566 25810015 - MGP_NODShiLtJ_P0052978 Nacc2 protein_coding protein_coding MGP_NODShiLtJ_T0052979.1 MGP_NODShiLtJ_G0025315.1 mouse_genomes_project 2 25772566 25842634 - MGP_NODShiLtJ_P0052979 Nacc2 protein_coding protein_coding MGP_NODShiLtJ_T0052980.1 MGP_NODShiLtJ_G0025315.1 mouse_genomes_project 2 25778103 25779530 - Nacc2 protein_coding processed_transcript MGP_NODShiLtJ_T0052981.1 MGP_NODShiLtJ_G0025315.1 mouse_genomes_project 2 25781409 25809657 - Nacc2 protein_coding processed_transcript MGP_NODShiLtJ_T0052982.1 MGP_NODShiLtJ_G0025315.1 mouse_genomes_project 2 25781531 25808213 - Nacc2 protein_coding processed_transcript MGP_NODShiLtJ_T0052983.1 MGP_NODShiLtJ_G0025315.1 mouse_genomes_project 2 25807644 25843036 - Nacc2 protein_coding processed_transcript MGP_NODShiLtJ_T0052984.1 MGP_NODShiLtJ_G0025315.1 mouse_genomes_project 2 25807923 25842599 - MGP_NODShiLtJ_P0052984 Nacc2 protein_coding protein_coding MGP_NODShiLtJ_T0052985.1 MGP_NODShiLtJ_G0025315.1 mouse_genomes_project 2 25808165 25842604 - Nacc2 protein_coding processed_transcript MGP_NODShiLtJ_T0099123.1 MGP_NODShiLtJ_G0037517.1 mouse_genomes_project 2 128146872 128147038 + Gm26505 snRNA snRNA MGP_NODShiLtJ_T0056916.1 MGP_NODShiLtJ_G0026212.1 mouse_genomes_project 2 137186214 137200594 - MGP_NODShiLtJ_P0056916 protein_coding protein_coding MGP_NODShiLtJ_T0017777.1 MGP_NODShiLtJ_G0015365.1 mouse_genomes_project 2 196248507 196251114 - Gm14617 processed_transcript retained_intron MGP_NODShiLtJ_T0017778.1 MGP_NODShiLtJ_G0015365.1 mouse_genomes_project 2 196248634 196253618 - Gm14617 processed_transcript lincRNA MGP_NODShiLtJ_T0017779.1 MGP_NODShiLtJ_G0015365.1 mouse_genomes_project 2 196250536 196253495 - Gm14617 processed_transcript lincRNA MGP_NODShiLtJ_T0098295.1 MGP_NODShiLtJ_G0036701.1 mouse_genomes_project 2 317670 320541 - Gm37525 sense_intronic sense_intronic MGP_NODShiLtJ_T0054667.1 MGP_NODShiLtJ_G0025605.1 mouse_genomes_project 2 67943228 68029618 - MGP_NODShiLtJ_P0054667 Dpp4 protein_coding protein_coding MGP_NODShiLtJ_T0054668.1 MGP_NODShiLtJ_G0025605.1 mouse_genomes_project 2 67947582 67959260 - Dpp4 protein_coding retained_intron MGP_NODShiLtJ_T0054669.1 MGP_NODShiLtJ_G0025605.1 mouse_genomes_project 2 67966173 67971626 - Dpp4 protein_coding processed_transcript MGP_NODShiLtJ_T0054670.1 MGP_NODShiLtJ_G0025605.1 mouse_genomes_project 2 67981704 67995238 - Dpp4 protein_coding retained_intron MGP_NODShiLtJ_T0054671.1 MGP_NODShiLtJ_G0025605.1 mouse_genomes_project 2 67991243 68029408 - Dpp4 protein_coding retained_intron MGP_NODShiLtJ_T0054672.1 MGP_NODShiLtJ_G0025605.1 mouse_genomes_project 2 68025088 68029246 - Dpp4 protein_coding processed_transcript MGP_NODShiLtJ_T0101104.1 MGP_NODShiLtJ_G0039452.1 mouse_genomes_project 2 148550287 148550527 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0057746.1 MGP_NODShiLtJ_G0026409.1 mouse_genomes_project 2 163180145 163180905 + MGP_NODShiLtJ_P0057746 Scp2d1 protein_coding protein_coding MGP_NODShiLtJ_T0004068.1 MGP_NODShiLtJ_G0003593.1 mouse_genomes_project 2 170618490 170620111 - Gm14167 antisense antisense MGP_NODShiLtJ_T0007103.1 MGP_NODShiLtJ_G0005819.1 mouse_genomes_project 2 25857357 25861053 - C330006A16Rik lincRNA lincRNA MGP_NODShiLtJ_T0007104.1 MGP_NODShiLtJ_G0005819.1 mouse_genomes_project 2 25858914 25859334 - C330006A16Rik lincRNA lincRNA MGP_NODShiLtJ_T0055504.1 MGP_NODShiLtJ_G0025839.1 mouse_genomes_project 2 97264443 97265421 + MGP_NODShiLtJ_P0055504 Olfr1126 protein_coding protein_coding MGP_NODShiLtJ_T0058744.1 MGP_NODShiLtJ_G0026642.1 mouse_genomes_project 2 183654222 183671068 + MGP_NODShiLtJ_P0058744 Gdap1l1 protein_coding protein_coding MGP_NODShiLtJ_T0058745.1 MGP_NODShiLtJ_G0026642.1 mouse_genomes_project 2 183654224 183670719 + MGP_NODShiLtJ_P0058745 Gdap1l1 protein_coding protein_coding MGP_NODShiLtJ_T0058746.1 MGP_NODShiLtJ_G0026642.1 mouse_genomes_project 2 183654224 183669699 + MGP_NODShiLtJ_P0058746 Gdap1l1 protein_coding protein_coding MGP_NODShiLtJ_T0058747.1 MGP_NODShiLtJ_G0026642.1 mouse_genomes_project 2 183654279 183669541 + MGP_NODShiLtJ_P0058747 Gdap1l1 protein_coding protein_coding MGP_NODShiLtJ_T0004089.1 MGP_NODShiLtJ_G0003612.1 mouse_genomes_project 2 177951743 177955485 + 1700060C20Rik antisense antisense MGP_NODShiLtJ_T0055544.1 MGP_NODShiLtJ_G0025869.1 mouse_genomes_project 2 98081913 98082855 - MGP_NODShiLtJ_P0055544 Olfr73 protein_coding protein_coding MGP_NODShiLtJ_T0056529.1 MGP_NODShiLtJ_G0026146.1 mouse_genomes_project 2 134572506 134634177 + MGP_NODShiLtJ_P0056529 Casc5 protein_coding protein_coding MGP_NODShiLtJ_T0056530.1 MGP_NODShiLtJ_G0026146.1 mouse_genomes_project 2 134572506 134596174 + MGP_NODShiLtJ_P0056530 Casc5 protein_coding protein_coding MGP_NODShiLtJ_T0056531.1 MGP_NODShiLtJ_G0026146.1 mouse_genomes_project 2 134572534 134592872 + MGP_NODShiLtJ_P0056531 Casc5 protein_coding protein_coding MGP_NODShiLtJ_T0056532.1 MGP_NODShiLtJ_G0026146.1 mouse_genomes_project 2 134572537 134600323 + MGP_NODShiLtJ_P0056532 Casc5 protein_coding protein_coding MGP_NODShiLtJ_T0056533.1 MGP_NODShiLtJ_G0026146.1 mouse_genomes_project 2 134582414 134635553 + MGP_NODShiLtJ_P0056533 Casc5 protein_coding protein_coding MGP_NODShiLtJ_T0055480.1 MGP_NODShiLtJ_G0025815.1 mouse_genomes_project 2 96255925 96256912 - MGP_NODShiLtJ_P0055480 protein_coding protein_coding MGP_NODShiLtJ_T0058075.1 MGP_NODShiLtJ_G0026510.1 mouse_genomes_project 2 172466126 172494766 + MGP_NODShiLtJ_P0058075 Pofut1 protein_coding protein_coding MGP_NODShiLtJ_T0058076.1 MGP_NODShiLtJ_G0026510.1 mouse_genomes_project 2 172466134 172490449 + MGP_NODShiLtJ_P0058076 Pofut1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058077.1 MGP_NODShiLtJ_G0026510.1 mouse_genomes_project 2 172466134 172490449 + MGP_NODShiLtJ_P0058077 Pofut1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058078.1 MGP_NODShiLtJ_G0026510.1 mouse_genomes_project 2 172466144 172486472 + MGP_NODShiLtJ_P0058078 Pofut1 protein_coding protein_coding MGP_NODShiLtJ_T0058079.1 MGP_NODShiLtJ_G0026510.1 mouse_genomes_project 2 172466162 172475056 + Pofut1 protein_coding retained_intron MGP_NODShiLtJ_T0058080.1 MGP_NODShiLtJ_G0026510.1 mouse_genomes_project 2 172466171 172491022 + MGP_NODShiLtJ_P0058080 Pofut1 protein_coding protein_coding MGP_NODShiLtJ_T0058081.1 MGP_NODShiLtJ_G0026510.1 mouse_genomes_project 2 172482020 172491805 + MGP_NODShiLtJ_P0058081 Pofut1 protein_coding protein_coding MGP_NODShiLtJ_T0058082.1 MGP_NODShiLtJ_G0026510.1 mouse_genomes_project 2 172482110 172492582 + MGP_NODShiLtJ_P0058082 Pofut1 protein_coding protein_coding MGP_NODShiLtJ_T0054686.1 MGP_NODShiLtJ_G0025608.1 mouse_genomes_project 2 68246575 68303345 - MGP_NODShiLtJ_P0054686 Ifih1 protein_coding protein_coding MGP_NODShiLtJ_T0054687.1 MGP_NODShiLtJ_G0025608.1 mouse_genomes_project 2 68248224 68303287 - MGP_NODShiLtJ_P0054687 Ifih1 protein_coding protein_coding MGP_NODShiLtJ_T0054688.1 MGP_NODShiLtJ_G0025608.1 mouse_genomes_project 2 68258931 68303389 - Ifih1 protein_coding retained_intron MGP_NODShiLtJ_T0054689.1 MGP_NODShiLtJ_G0025608.1 mouse_genomes_project 2 68279955 68293146 - Ifih1 protein_coding processed_transcript MGP_NODShiLtJ_T0054690.1 MGP_NODShiLtJ_G0025608.1 mouse_genomes_project 2 68283999 68303292 - Ifih1 protein_coding retained_intron MGP_NODShiLtJ_T0100410.1 MGP_NODShiLtJ_G0038804.1 mouse_genomes_project 2 170042640 170042776 - Gm24199 snoRNA snoRNA MGP_NODShiLtJ_T0056803.1 MGP_NODShiLtJ_G0026196.1 mouse_genomes_project 2 136800603 136816619 - MGP_NODShiLtJ_P0056803 Tgm7 protein_coding protein_coding MGP_NODShiLtJ_T0052410.1 MGP_NODShiLtJ_G0025210.1 mouse_genomes_project 2 16762421 16766313 - Skida1 protein_coding processed_transcript MGP_NODShiLtJ_T0052411.1 MGP_NODShiLtJ_G0025210.1 mouse_genomes_project 2 16765823 16770790 - MGP_NODShiLtJ_P0052411 Skida1 protein_coding protein_coding MGP_NODShiLtJ_T0052412.1 MGP_NODShiLtJ_G0025210.1 mouse_genomes_project 2 16766993 16770189 - MGP_NODShiLtJ_P0052412 Skida1 protein_coding protein_coding MGP_NODShiLtJ_T0052413.1 MGP_NODShiLtJ_G0025210.1 mouse_genomes_project 2 16769455 16770523 - MGP_NODShiLtJ_P0052413 Skida1 protein_coding protein_coding MGP_NODShiLtJ_T0052414.1 MGP_NODShiLtJ_G0025210.1 mouse_genomes_project 2 16769883 16770770 - MGP_NODShiLtJ_P0052414 Skida1 protein_coding protein_coding MGP_NODShiLtJ_T0004115.1 MGP_NODShiLtJ_G0003630.1 mouse_genomes_project 2 187561488 187562258 + Gm17096 antisense antisense MGP_NODShiLtJ_T0058838.1 MGP_NODShiLtJ_G0026674.1 mouse_genomes_project 2 184803538 184817018 + MGP_NODShiLtJ_P0058838 Pigt protein_coding protein_coding MGP_NODShiLtJ_T0058839.1 MGP_NODShiLtJ_G0026674.1 mouse_genomes_project 2 184803553 184811613 + MGP_NODShiLtJ_P0058839 Pigt protein_coding protein_coding MGP_NODShiLtJ_T0058840.1 MGP_NODShiLtJ_G0026674.1 mouse_genomes_project 2 184803564 184811890 + Pigt protein_coding retained_intron MGP_NODShiLtJ_T0058841.1 MGP_NODShiLtJ_G0026674.1 mouse_genomes_project 2 184803577 184817025 + MGP_NODShiLtJ_P0058841 Pigt protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058842.1 MGP_NODShiLtJ_G0026674.1 mouse_genomes_project 2 184803579 184817018 + MGP_NODShiLtJ_P0058842 Pigt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058843.1 MGP_NODShiLtJ_G0026674.1 mouse_genomes_project 2 184808462 184810152 + Pigt protein_coding retained_intron MGP_NODShiLtJ_T0052943.1 MGP_NODShiLtJ_G0025311.1 mouse_genomes_project 2 25534049 25538303 - MGP_NODShiLtJ_P0052943 Sohlh1 protein_coding protein_coding MGP_NODShiLtJ_T0013374.1 MGP_NODShiLtJ_G0011482.1 mouse_genomes_project 2 37372231 37372804 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017637.1 MGP_NODShiLtJ_G0015293.1 mouse_genomes_project 2 72736548 72750961 + Gm13630 processed_transcript processed_transcript MGP_NODShiLtJ_T0013400.1 MGP_NODShiLtJ_G0011508.1 mouse_genomes_project 2 47884625 47884859 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099127.1 MGP_NODShiLtJ_G0037521.1 mouse_genomes_project 2 136841884 136841990 - Gm23858 snRNA snRNA MGP_NODShiLtJ_T0053219.1 MGP_NODShiLtJ_G0025356.1 mouse_genomes_project 2 27919473 27927976 - MGP_NODShiLtJ_P0053219 Fcnb protein_coding protein_coding MGP_NODShiLtJ_T0053220.1 MGP_NODShiLtJ_G0025356.1 mouse_genomes_project 2 27921186 27927976 - MGP_NODShiLtJ_P0053220 Fcnb protein_coding protein_coding MGP_NODShiLtJ_T0053221.1 MGP_NODShiLtJ_G0025356.1 mouse_genomes_project 2 27922827 27927976 - MGP_NODShiLtJ_P0053221 Fcnb protein_coding protein_coding MGP_NODShiLtJ_T0007083.1 MGP_NODShiLtJ_G0005804.1 mouse_genomes_project 2 9248841 9310607 - 8030442B05Rik lincRNA lincRNA MGP_NODShiLtJ_T0001006.1 MGP_NODShiLtJ_G0000932.1 mouse_genomes_project 2 9273570 9275781 - TEC TEC MGP_NODShiLtJ_T0013335.1 MGP_NODShiLtJ_G0011443.1 mouse_genomes_project 2 18609009 18610361 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052319.1 MGP_NODShiLtJ_G0025191.1 mouse_genomes_project 2 11105860 11114206 - MGP_NODShiLtJ_P0052319 C1ql3 protein_coding protein_coding MGP_NODShiLtJ_T0003832.1 MGP_NODShiLtJ_G0003424.1 mouse_genomes_project 2 1504049 1512287 - Gm13175 antisense antisense MGP_NODShiLtJ_T0007082.1 MGP_NODShiLtJ_G0005803.1 mouse_genomes_project 2 9222086 9226581 - Gm38171 lincRNA lincRNA MGP_NODShiLtJ_T0007325.1 MGP_NODShiLtJ_G0005998.1 mouse_genomes_project 2 183026129 183027218 - Gm14255 lincRNA lincRNA MGP_NODShiLtJ_T0007250.1 MGP_NODShiLtJ_G0005936.1 mouse_genomes_project 2 133236407 133237856 - Gm28183 lincRNA lincRNA MGP_NODShiLtJ_T0056677.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135954164 135995607 - MGP_NODShiLtJ_P0056677 Vps39 protein_coding protein_coding MGP_NODShiLtJ_T0056678.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135954164 135995595 - MGP_NODShiLtJ_P0056678 Vps39 protein_coding protein_coding MGP_NODShiLtJ_T0056679.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135954538 135995591 - Vps39 protein_coding processed_transcript MGP_NODShiLtJ_T0056680.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135955755 135957303 - Vps39 protein_coding retained_intron MGP_NODShiLtJ_T0056681.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135957566 135961237 - Vps39 protein_coding retained_intron MGP_NODShiLtJ_T0056682.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135959599 135995579 - Vps39 protein_coding retained_intron MGP_NODShiLtJ_T0056683.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135963598 135972133 - Vps39 protein_coding retained_intron MGP_NODShiLtJ_T0056684.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135977067 135986634 - Vps39 protein_coding processed_transcript MGP_NODShiLtJ_T0056685.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135985680 135995591 - Vps39 protein_coding processed_transcript MGP_NODShiLtJ_T0056686.1 MGP_NODShiLtJ_G0026180.1 mouse_genomes_project 2 135990884 135995595 - Vps39 protein_coding processed_transcript MGP_NODShiLtJ_T0056309.1 MGP_NODShiLtJ_G0026068.1 mouse_genomes_project 2 124541855 124544122 - MGP_NODShiLtJ_P0056309 Fibin protein_coding protein_coding MGP_NODShiLtJ_T0059436.1 MGP_NODShiLtJ_G0026816.1 mouse_genomes_project 2 202197246 202242685 - MGP_NODShiLtJ_P0059436 Dido1 protein_coding protein_coding MGP_NODShiLtJ_T0059437.1 MGP_NODShiLtJ_G0026816.1 mouse_genomes_project 2 202207600 202250334 - MGP_NODShiLtJ_P0059437 Dido1 protein_coding protein_coding MGP_NODShiLtJ_T0059438.1 MGP_NODShiLtJ_G0026816.1 mouse_genomes_project 2 202207602 202216288 - MGP_NODShiLtJ_P0059438 Dido1 protein_coding protein_coding MGP_NODShiLtJ_T0059439.1 MGP_NODShiLtJ_G0026816.1 mouse_genomes_project 2 202208525 202242685 - MGP_NODShiLtJ_P0059439 Dido1 protein_coding protein_coding MGP_NODShiLtJ_T0059440.1 MGP_NODShiLtJ_G0026816.1 mouse_genomes_project 2 202221389 202250334 - MGP_NODShiLtJ_P0059440 Dido1 protein_coding protein_coding MGP_NODShiLtJ_T0059441.1 MGP_NODShiLtJ_G0026816.1 mouse_genomes_project 2 202221404 202242685 - MGP_NODShiLtJ_P0059441 Dido1 protein_coding protein_coding MGP_NODShiLtJ_T0059442.1 MGP_NODShiLtJ_G0026816.1 mouse_genomes_project 2 202225357 202242327 - Dido1 protein_coding processed_transcript MGP_NODShiLtJ_T0057176.1 MGP_NODShiLtJ_G0026277.1 mouse_genomes_project 2 143837321 143845645 - MGP_NODShiLtJ_P0057176 Fahd2a protein_coding protein_coding MGP_NODShiLtJ_T0057177.1 MGP_NODShiLtJ_G0026277.1 mouse_genomes_project 2 143837322 143845660 - Fahd2a protein_coding retained_intron MGP_NODShiLtJ_T0057178.1 MGP_NODShiLtJ_G0026277.1 mouse_genomes_project 2 143837377 143839426 - Fahd2a protein_coding processed_transcript MGP_NODShiLtJ_T0057179.1 MGP_NODShiLtJ_G0026277.1 mouse_genomes_project 2 143837943 143845652 - Fahd2a protein_coding processed_transcript MGP_NODShiLtJ_T0057180.1 MGP_NODShiLtJ_G0026277.1 mouse_genomes_project 2 143839228 143845575 - Fahd2a protein_coding processed_transcript MGP_NODShiLtJ_T0057181.1 MGP_NODShiLtJ_G0026277.1 mouse_genomes_project 2 143839517 143845611 - Fahd2a protein_coding retained_intron MGP_NODShiLtJ_T0057182.1 MGP_NODShiLtJ_G0026277.1 mouse_genomes_project 2 143841537 143845603 - Fahd2a protein_coding processed_transcript MGP_NODShiLtJ_T0011404.1 MGP_NODShiLtJ_G0009537.1 mouse_genomes_project 2 147291516 147291888 - Gm24893 misc_RNA misc_RNA MGP_NODShiLtJ_T0013499.1 MGP_NODShiLtJ_G0011607.1 mouse_genomes_project 2 86498321 86498489 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052532.1 MGP_NODShiLtJ_G0025231.1 mouse_genomes_project 2 22081322 22099064 + Pdss1 protein_coding processed_transcript MGP_NODShiLtJ_T0052533.1 MGP_NODShiLtJ_G0025231.1 mouse_genomes_project 2 22081322 22131820 + MGP_NODShiLtJ_P0052533 Pdss1 protein_coding protein_coding MGP_NODShiLtJ_T0052534.1 MGP_NODShiLtJ_G0025231.1 mouse_genomes_project 2 22081395 22102578 + MGP_NODShiLtJ_P0052534 Pdss1 protein_coding protein_coding MGP_NODShiLtJ_T0052535.1 MGP_NODShiLtJ_G0025231.1 mouse_genomes_project 2 22081419 22087629 + MGP_NODShiLtJ_P0052535 Pdss1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052536.1 MGP_NODShiLtJ_G0025231.1 mouse_genomes_project 2 22081848 22092623 + MGP_NODShiLtJ_P0052536 Pdss1 protein_coding protein_coding MGP_NODShiLtJ_T0052537.1 MGP_NODShiLtJ_G0025231.1 mouse_genomes_project 2 22125673 22131809 + Pdss1 protein_coding retained_intron MGP_NODShiLtJ_T0052538.1 MGP_NODShiLtJ_G0025231.1 mouse_genomes_project 2 22127109 22131796 + MGP_NODShiLtJ_P0052538 Pdss1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055591.1 MGP_NODShiLtJ_G0025913.1 mouse_genomes_project 2 99579326 99580262 - MGP_NODShiLtJ_P0055591 Olfr1224-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0017618.1 MGP_NODShiLtJ_G0015282.1 mouse_genomes_project 2 32258851 32273766 - Gm16534 processed_transcript processed_transcript MGP_NODShiLtJ_T0017619.1 MGP_NODShiLtJ_G0015282.1 mouse_genomes_project 2 32259646 32274513 - Gm16534 processed_transcript processed_transcript MGP_NODShiLtJ_T0054562.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 64857569 65105391 + MGP_NODShiLtJ_P0054562 Tanc1 protein_coding protein_coding MGP_NODShiLtJ_T0054563.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 64857600 64894930 + Tanc1 protein_coding retained_intron MGP_NODShiLtJ_T0054564.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 64875576 64892480 + Tanc1 protein_coding retained_intron MGP_NODShiLtJ_T0054565.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 64892285 65104963 + MGP_NODShiLtJ_P0054565 Tanc1 protein_coding protein_coding MGP_NODShiLtJ_T0054566.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 64945913 65104971 + MGP_NODShiLtJ_P0054566 Tanc1 protein_coding protein_coding MGP_NODShiLtJ_T0054567.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 64960339 64978385 + Tanc1 protein_coding processed_transcript MGP_NODShiLtJ_T0054568.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 64998009 65079504 + Tanc1 protein_coding retained_intron MGP_NODShiLtJ_T0054569.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 65024533 65027622 + Tanc1 protein_coding processed_transcript MGP_NODShiLtJ_T0054570.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 65037234 65043023 + Tanc1 protein_coding processed_transcript MGP_NODShiLtJ_T0054571.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 65064138 65067575 + Tanc1 protein_coding retained_intron MGP_NODShiLtJ_T0054572.1 MGP_NODShiLtJ_G0025592.1 mouse_genomes_project 2 65101032 65104961 + Tanc1 protein_coding retained_intron MGP_NODShiLtJ_T0052469.1 MGP_NODShiLtJ_G0025221.1 mouse_genomes_project 2 18374512 18473484 - MGP_NODShiLtJ_P0052469 4921504E06Rik protein_coding protein_coding MGP_NODShiLtJ_T0052470.1 MGP_NODShiLtJ_G0025221.1 mouse_genomes_project 2 18409571 18473484 - 4921504E06Rik protein_coding retained_intron MGP_NODShiLtJ_T0013504.1 MGP_NODShiLtJ_G0011612.1 mouse_genomes_project 2 88355687 88355969 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058469.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176201938 176364635 + MGP_NODShiLtJ_P0058469 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058470.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176201938 176364637 + MGP_NODShiLtJ_P0058470 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058471.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176290050 176363453 + MGP_NODShiLtJ_P0058471 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058472.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176290050 176363448 + MGP_NODShiLtJ_P0058472 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058473.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176314823 176348518 + MGP_NODShiLtJ_P0058473 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058474.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176315297 176363229 + Dlgap4 protein_coding retained_intron MGP_NODShiLtJ_T0058475.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176315308 176348759 + MGP_NODShiLtJ_P0058475 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058476.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176315311 176348596 + MGP_NODShiLtJ_P0058476 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058477.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176315313 176363118 + MGP_NODShiLtJ_P0058477 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058478.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176315321 176363177 + MGP_NODShiLtJ_P0058478 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058479.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176315743 176364637 + MGP_NODShiLtJ_P0058479 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058480.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176347761 176364644 + MGP_NODShiLtJ_P0058480 Dlgap4 protein_coding protein_coding MGP_NODShiLtJ_T0058481.1 MGP_NODShiLtJ_G0026586.1 mouse_genomes_project 2 176360201 176363053 + Dlgap4 protein_coding processed_transcript MGP_NODShiLtJ_T0007089.1 MGP_NODShiLtJ_G0005810.1 mouse_genomes_project 2 18254420 18260581 + 4930447M23Rik lincRNA lincRNA MGP_NODShiLtJ_T0007090.1 MGP_NODShiLtJ_G0005810.1 mouse_genomes_project 2 18254941 18262446 + 4930447M23Rik lincRNA lincRNA MGP_NODShiLtJ_T0007091.1 MGP_NODShiLtJ_G0005810.1 mouse_genomes_project 2 18255040 18260315 + 4930447M23Rik lincRNA lincRNA MGP_NODShiLtJ_T0001001.1 MGP_NODShiLtJ_G0000927.1 mouse_genomes_project 2 8892378 8892489 - TEC TEC MGP_NODShiLtJ_T0100412.1 MGP_NODShiLtJ_G0038806.1 mouse_genomes_project 2 170328974 170329110 - snoRNA snoRNA MGP_NODShiLtJ_T0053871.1 MGP_NODShiLtJ_G0025454.1 mouse_genomes_project 2 32916760 32952608 + MGP_NODShiLtJ_P0053871 Eng protein_coding protein_coding MGP_NODShiLtJ_T0053872.1 MGP_NODShiLtJ_G0025454.1 mouse_genomes_project 2 32916760 32953148 + MGP_NODShiLtJ_P0053872 Eng protein_coding protein_coding MGP_NODShiLtJ_T0053873.1 MGP_NODShiLtJ_G0025454.1 mouse_genomes_project 2 32916787 32953159 + MGP_NODShiLtJ_P0053873 Eng protein_coding protein_coding MGP_NODShiLtJ_T0053874.1 MGP_NODShiLtJ_G0025454.1 mouse_genomes_project 2 32917158 32920533 + Eng protein_coding processed_transcript MGP_NODShiLtJ_T0053875.1 MGP_NODShiLtJ_G0025454.1 mouse_genomes_project 2 32942939 32943842 + Eng protein_coding retained_intron MGP_NODShiLtJ_T0053876.1 MGP_NODShiLtJ_G0025454.1 mouse_genomes_project 2 32943462 32951745 + MGP_NODShiLtJ_P0053876 Eng protein_coding protein_coding MGP_NODShiLtJ_T0054045.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35229529 35248873 - Fbxw2 protein_coding processed_transcript MGP_NODShiLtJ_T0054046.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35230193 35252026 - MGP_NODShiLtJ_P0054046 Fbxw2 protein_coding protein_coding MGP_NODShiLtJ_T0054047.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35230353 35249134 - MGP_NODShiLtJ_P0054047 Fbxw2 protein_coding protein_coding MGP_NODShiLtJ_T0054048.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35230354 35252188 - MGP_NODShiLtJ_P0054048 Fbxw2 protein_coding protein_coding MGP_NODShiLtJ_T0054049.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35230356 35252183 - MGP_NODShiLtJ_P0054049 Fbxw2 protein_coding protein_coding MGP_NODShiLtJ_T0054050.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35230356 35252024 - MGP_NODShiLtJ_P0054050 Fbxw2 protein_coding protein_coding MGP_NODShiLtJ_T0054051.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35231268 35252154 - MGP_NODShiLtJ_P0054051 Fbxw2 protein_coding protein_coding MGP_NODShiLtJ_T0054052.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35232293 35233683 - Fbxw2 protein_coding processed_transcript MGP_NODShiLtJ_T0054053.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35236899 35252264 - Fbxw2 protein_coding processed_transcript MGP_NODShiLtJ_T0054054.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35237798 35252120 - Fbxw2 protein_coding processed_transcript MGP_NODShiLtJ_T0054055.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35240328 35252170 - Fbxw2 protein_coding processed_transcript MGP_NODShiLtJ_T0054056.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35247776 35252160 - Fbxw2 protein_coding retained_intron MGP_NODShiLtJ_T0054057.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35248556 35251975 - Fbxw2 protein_coding processed_transcript MGP_NODShiLtJ_T0054058.1 MGP_NODShiLtJ_G0025480.1 mouse_genomes_project 2 35251215 35252168 - Fbxw2 protein_coding processed_transcript MGP_NODShiLtJ_T0055693.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101779468 101830352 + Celf1 protein_coding processed_transcript MGP_NODShiLtJ_T0055694.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101779483 101863840 + MGP_NODShiLtJ_P0055694 Celf1 protein_coding protein_coding MGP_NODShiLtJ_T0055695.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101779544 101842313 + Celf1 protein_coding processed_transcript MGP_NODShiLtJ_T0055696.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101779623 101845185 + Celf1 protein_coding processed_transcript MGP_NODShiLtJ_T0055697.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101780961 101863084 + MGP_NODShiLtJ_P0055697 Celf1 protein_coding protein_coding MGP_NODShiLtJ_T0055698.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101807225 101830414 + Celf1 protein_coding processed_transcript MGP_NODShiLtJ_T0055699.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101830343 101863833 + MGP_NODShiLtJ_P0055699 Celf1 protein_coding protein_coding MGP_NODShiLtJ_T0055700.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101842275 101863840 + MGP_NODShiLtJ_P0055700 Celf1 protein_coding protein_coding MGP_NODShiLtJ_T0055701.1 MGP_NODShiLtJ_G0025961.1 mouse_genomes_project 2 101856836 101857717 + Celf1 protein_coding processed_transcript MGP_NODShiLtJ_T0055522.1 MGP_NODShiLtJ_G0025849.1 mouse_genomes_project 2 97530620 97531547 - MGP_NODShiLtJ_P0055522 Olfr1132 protein_coding protein_coding MGP_NODShiLtJ_T0010299.1 MGP_NODShiLtJ_G0008432.1 mouse_genomes_project 2 32922492 32922578 + Mir1954 miRNA miRNA MGP_NODShiLtJ_T0059411.1 MGP_NODShiLtJ_G0026810.1 mouse_genomes_project 2 201974184 201993855 + MGP_NODShiLtJ_P0059411 Slco4a1 protein_coding protein_coding MGP_NODShiLtJ_T0059412.1 MGP_NODShiLtJ_G0026810.1 mouse_genomes_project 2 201974273 201993833 + Slco4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0059413.1 MGP_NODShiLtJ_G0026810.1 mouse_genomes_project 2 201978933 201993855 + MGP_NODShiLtJ_P0059413 Slco4a1 protein_coding protein_coding MGP_NODShiLtJ_T0059414.1 MGP_NODShiLtJ_G0026810.1 mouse_genomes_project 2 201985039 201986362 + Slco4a1 protein_coding retained_intron MGP_NODShiLtJ_T0059415.1 MGP_NODShiLtJ_G0026810.1 mouse_genomes_project 2 201990418 201993840 + Slco4a1 protein_coding retained_intron MGP_NODShiLtJ_T0057939.1 MGP_NODShiLtJ_G0026464.1 mouse_genomes_project 2 170811444 170841098 - MGP_NODShiLtJ_P0057939 Psmf1 protein_coding protein_coding MGP_NODShiLtJ_T0057940.1 MGP_NODShiLtJ_G0026464.1 mouse_genomes_project 2 170811690 170816625 - Psmf1 protein_coding retained_intron MGP_NODShiLtJ_T0057941.1 MGP_NODShiLtJ_G0026464.1 mouse_genomes_project 2 170811690 170841081 - MGP_NODShiLtJ_P0057941 Psmf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057942.1 MGP_NODShiLtJ_G0026464.1 mouse_genomes_project 2 170813894 170843973 - MGP_NODShiLtJ_P0057942 Psmf1 protein_coding protein_coding MGP_NODShiLtJ_T0057943.1 MGP_NODShiLtJ_G0026464.1 mouse_genomes_project 2 170815114 170828595 - Psmf1 protein_coding retained_intron MGP_NODShiLtJ_T0057944.1 MGP_NODShiLtJ_G0026464.1 mouse_genomes_project 2 170826208 170841081 - Psmf1 protein_coding retained_intron MGP_NODShiLtJ_T0057214.1 MGP_NODShiLtJ_G0026287.1 mouse_genomes_project 2 144262222 144301831 + Acoxl protein_coding processed_transcript MGP_NODShiLtJ_T0057215.1 MGP_NODShiLtJ_G0026287.1 mouse_genomes_project 2 144278730 144564072 + MGP_NODShiLtJ_P0057215 Acoxl protein_coding protein_coding MGP_NODShiLtJ_T0057216.1 MGP_NODShiLtJ_G0026287.1 mouse_genomes_project 2 144332895 144563707 + MGP_NODShiLtJ_P0057216 Acoxl protein_coding protein_coding MGP_NODShiLtJ_T0013414.1 MGP_NODShiLtJ_G0011522.1 mouse_genomes_project 2 54384735 54385147 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004078.1 MGP_NODShiLtJ_G0003602.1 mouse_genomes_project 2 174058737 174061419 - Gm14198 antisense antisense MGP_NODShiLtJ_T0013297.1 MGP_NODShiLtJ_G0011405.1 mouse_genomes_project 2 3348768 3353480 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058212.1 MGP_NODShiLtJ_G0026548.1 mouse_genomes_project 2 174537499 174557820 - MGP_NODShiLtJ_P0058212 Gm4737 protein_coding protein_coding MGP_NODShiLtJ_T0058213.1 MGP_NODShiLtJ_G0026548.1 mouse_genomes_project 2 174539439 174557715 - MGP_NODShiLtJ_P0058213 Gm4737 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058214.1 MGP_NODShiLtJ_G0026548.1 mouse_genomes_project 2 174549118 174557770 - MGP_NODShiLtJ_P0058214 Gm4737 protein_coding protein_coding MGP_NODShiLtJ_T0058215.1 MGP_NODShiLtJ_G0026548.1 mouse_genomes_project 2 174551910 174557770 - Gm4737 protein_coding retained_intron MGP_NODShiLtJ_T0013510.1 MGP_NODShiLtJ_G0011618.1 mouse_genomes_project 2 90358919 90359514 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003965.1 MGP_NODShiLtJ_G0003524.1 mouse_genomes_project 2 81979849 81980672 - Gm28793 antisense antisense MGP_NODShiLtJ_T0058823.1 MGP_NODShiLtJ_G0026670.1 mouse_genomes_project 2 184755895 184759398 + Sys1 protein_coding processed_transcript MGP_NODShiLtJ_T0058824.1 MGP_NODShiLtJ_G0026670.1 mouse_genomes_project 2 184755907 184764609 + MGP_NODShiLtJ_P0058824 Sys1 protein_coding protein_coding MGP_NODShiLtJ_T0058825.1 MGP_NODShiLtJ_G0026670.1 mouse_genomes_project 2 184756019 184759770 + Sys1 protein_coding processed_transcript MGP_NODShiLtJ_T0058827.1 MGP_NODShiLtJ_G0026670.1 mouse_genomes_project 2 184759432 184764605 + MGP_NODShiLtJ_P0058827 Sys1 protein_coding protein_coding MGP_NODShiLtJ_T0058828.1 MGP_NODShiLtJ_G0026670.1 mouse_genomes_project 2 184759461 184774845 + MGP_NODShiLtJ_P0058828 Sys1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058829.1 MGP_NODShiLtJ_G0026670.1 mouse_genomes_project 2 184759514 184780973 + MGP_NODShiLtJ_P0058829 Sys1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058830.1 MGP_NODShiLtJ_G0026670.1 mouse_genomes_project 2 184759770 184774845 + MGP_NODShiLtJ_P0058830 Sys1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058797.1 MGP_NODShiLtJ_G0026658.1 mouse_genomes_project 2 184451627 184458076 - MGP_NODShiLtJ_P0058797 Wfdc5 protein_coding protein_coding MGP_NODShiLtJ_T0058798.1 MGP_NODShiLtJ_G0026658.1 mouse_genomes_project 2 184452793 184457932 - MGP_NODShiLtJ_P0058798 Wfdc5 protein_coding protein_coding MGP_NODShiLtJ_T0001022.1 MGP_NODShiLtJ_G0000948.1 mouse_genomes_project 2 12321615 12325089 + TEC TEC MGP_NODShiLtJ_T0056933.1 MGP_NODShiLtJ_G0026216.1 mouse_genomes_project 2 137642263 137716244 + MGP_NODShiLtJ_P0056933 Casc4 protein_coding protein_coding MGP_NODShiLtJ_T0056934.1 MGP_NODShiLtJ_G0026216.1 mouse_genomes_project 2 137642263 137716244 + MGP_NODShiLtJ_P0056934 Casc4 protein_coding protein_coding MGP_NODShiLtJ_T0056935.1 MGP_NODShiLtJ_G0026216.1 mouse_genomes_project 2 137642422 137678429 + Casc4 protein_coding retained_intron MGP_NODShiLtJ_T0056936.1 MGP_NODShiLtJ_G0026216.1 mouse_genomes_project 2 137642423 137716115 + MGP_NODShiLtJ_P0056936 Casc4 protein_coding protein_coding MGP_NODShiLtJ_T0056937.1 MGP_NODShiLtJ_G0026216.1 mouse_genomes_project 2 137642423 137716116 + MGP_NODShiLtJ_P0056937 Casc4 protein_coding protein_coding MGP_NODShiLtJ_T0056938.1 MGP_NODShiLtJ_G0026216.1 mouse_genomes_project 2 137642772 137713956 + Casc4 protein_coding processed_transcript MGP_NODShiLtJ_T0056939.1 MGP_NODShiLtJ_G0026216.1 mouse_genomes_project 2 137677026 137713921 + MGP_NODShiLtJ_P0056939 Casc4 protein_coding protein_coding MGP_NODShiLtJ_T0058118.1 MGP_NODShiLtJ_G0026521.1 mouse_genomes_project 2 173214352 173226766 + MGP_NODShiLtJ_P0058118 Bpifb6 protein_coding protein_coding MGP_NODShiLtJ_T0058119.1 MGP_NODShiLtJ_G0026521.1 mouse_genomes_project 2 173214359 173220902 + MGP_NODShiLtJ_P0058119 Bpifb6 protein_coding protein_coding MGP_NODShiLtJ_T0053835.1 MGP_NODShiLtJ_G0025447.1 mouse_genomes_project 2 32800365 32835091 + Fam102a protein_coding retained_intron MGP_NODShiLtJ_T0053836.1 MGP_NODShiLtJ_G0025447.1 mouse_genomes_project 2 32800366 32801224 + MGP_NODShiLtJ_P0053836 Fam102a protein_coding protein_coding MGP_NODShiLtJ_T0053837.1 MGP_NODShiLtJ_G0025447.1 mouse_genomes_project 2 32800392 32835097 + MGP_NODShiLtJ_P0053837 Fam102a protein_coding protein_coding MGP_NODShiLtJ_T0053838.1 MGP_NODShiLtJ_G0025447.1 mouse_genomes_project 2 32800766 32823357 + MGP_NODShiLtJ_P0053838 Fam102a protein_coding protein_coding MGP_NODShiLtJ_T0053839.1 MGP_NODShiLtJ_G0025447.1 mouse_genomes_project 2 32805223 32825395 + Fam102a protein_coding processed_transcript MGP_NODShiLtJ_T0013435.1 MGP_NODShiLtJ_G0011543.1 mouse_genomes_project 2 62349029 62353472 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056455.1 MGP_NODShiLtJ_G0026127.1 mouse_genomes_project 2 133569295 133584490 + MGP_NODShiLtJ_P0056455 Thbs1 protein_coding protein_coding MGP_NODShiLtJ_T0056456.1 MGP_NODShiLtJ_G0026127.1 mouse_genomes_project 2 133580299 133581124 + Thbs1 protein_coding processed_transcript MGP_NODShiLtJ_T0052817.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25053320 25062225 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052818.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25054446 25064086 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052819.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25057051 25065396 + MGP_NODShiLtJ_P0052819 Npdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052820.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25057087 25062756 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052821.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25057149 25063755 + MGP_NODShiLtJ_P0052821 Npdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052822.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25057151 25065396 + MGP_NODShiLtJ_P0052822 Npdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052823.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25057174 25064223 + MGP_NODShiLtJ_P0052823 Npdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052824.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25057219 25063019 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052825.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25057428 25063911 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052826.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25058065 25065393 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052827.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25062191 25065396 + MGP_NODShiLtJ_P0052827 Npdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052828.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25063189 25065158 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052829.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25063599 25065390 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052830.1 MGP_NODShiLtJ_G0025282.1 mouse_genomes_project 2 25064773 25065393 + Npdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0013618.1 MGP_NODShiLtJ_G0011726.1 mouse_genomes_project 2 134528105 134528374 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057799.1 MGP_NODShiLtJ_G0026418.1 mouse_genomes_project 2 165524276 165593183 + MGP_NODShiLtJ_P0057799 Xrn2 protein_coding protein_coding MGP_NODShiLtJ_T0057800.1 MGP_NODShiLtJ_G0026418.1 mouse_genomes_project 2 165542048 165552121 + Xrn2 protein_coding retained_intron MGP_NODShiLtJ_T0057801.1 MGP_NODShiLtJ_G0026418.1 mouse_genomes_project 2 165556632 165563297 + Xrn2 protein_coding retained_intron MGP_NODShiLtJ_T0057802.1 MGP_NODShiLtJ_G0026418.1 mouse_genomes_project 2 165576978 165584568 + Xrn2 protein_coding retained_intron MGP_NODShiLtJ_T0013653.1 MGP_NODShiLtJ_G0011761.1 mouse_genomes_project 2 149418475 149418930 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052378.1 MGP_NODShiLtJ_G0025204.1 mouse_genomes_project 2 13329223 13363828 + MGP_NODShiLtJ_P0052378 Arl5b protein_coding protein_coding MGP_NODShiLtJ_T0052380.1 MGP_NODShiLtJ_G0025204.1 mouse_genomes_project 2 13335767 13363832 + MGP_NODShiLtJ_P0052380 Arl5b protein_coding protein_coding MGP_NODShiLtJ_T0052381.1 MGP_NODShiLtJ_G0025204.1 mouse_genomes_project 2 13335814 13357989 + MGP_NODShiLtJ_P0052381 Arl5b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052382.1 MGP_NODShiLtJ_G0025204.1 mouse_genomes_project 2 13335874 13358947 + MGP_NODShiLtJ_P0052382 Arl5b protein_coding protein_coding MGP_NODShiLtJ_T0052383.1 MGP_NODShiLtJ_G0025204.1 mouse_genomes_project 2 13349532 13357999 + MGP_NODShiLtJ_P0052383 Arl5b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052384.1 MGP_NODShiLtJ_G0025204.1 mouse_genomes_project 2 13351355 13354565 + Arl5b protein_coding retained_intron MGP_NODShiLtJ_T0052385.1 MGP_NODShiLtJ_G0025204.1 mouse_genomes_project 2 13356392 13363828 + MGP_NODShiLtJ_P0052385 Arl5b protein_coding protein_coding MGP_NODShiLtJ_T0101839.1 MGP_NODShiLtJ_G0040007.1 mouse_genomes_project 2 137226134 137277320 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0055464.1 MGP_NODShiLtJ_G0025799.1 mouse_genomes_project 2 95519382 95520318 - MGP_NODShiLtJ_P0055464 Olfr1055 protein_coding protein_coding MGP_NODShiLtJ_T0055811.1 MGP_NODShiLtJ_G0025974.1 mouse_genomes_project 2 102365092 102387190 + Lrp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055812.1 MGP_NODShiLtJ_G0025974.1 mouse_genomes_project 2 102365092 102422675 + MGP_NODShiLtJ_P0055812 Lrp4 protein_coding protein_coding MGP_NODShiLtJ_T0055813.1 MGP_NODShiLtJ_G0025974.1 mouse_genomes_project 2 102384158 102388769 + Lrp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055814.1 MGP_NODShiLtJ_G0025974.1 mouse_genomes_project 2 102384221 102386745 + Lrp4 protein_coding processed_transcript MGP_NODShiLtJ_T0101821.1 MGP_NODShiLtJ_G0039989.1 mouse_genomes_project 2 97788144 97789081 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101317.1 MGP_NODShiLtJ_G0039570.1 mouse_genomes_project 2 98354854 98356397 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0007262.1 MGP_NODShiLtJ_G0005946.1 mouse_genomes_project 2 141508548 141509838 - Gm14003 lincRNA lincRNA MGP_NODShiLtJ_T0053101.1 MGP_NODShiLtJ_G0025333.1 mouse_genomes_project 2 26424559 26428168 - MGP_NODShiLtJ_P0053101 Lcn4 protein_coding protein_coding MGP_NODShiLtJ_T0058883.1 MGP_NODShiLtJ_G0026692.1 mouse_genomes_project 2 185149234 185152958 - Acot8 protein_coding retained_intron MGP_NODShiLtJ_T0058884.1 MGP_NODShiLtJ_G0026692.1 mouse_genomes_project 2 185149234 185162166 - MGP_NODShiLtJ_P0058884 Acot8 protein_coding protein_coding MGP_NODShiLtJ_T0058885.1 MGP_NODShiLtJ_G0026692.1 mouse_genomes_project 2 185149234 185162166 - MGP_NODShiLtJ_P0058885 Acot8 protein_coding protein_coding MGP_NODShiLtJ_T0058886.1 MGP_NODShiLtJ_G0026692.1 mouse_genomes_project 2 185152276 185162165 - MGP_NODShiLtJ_P0058886 Acot8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058887.1 MGP_NODShiLtJ_G0026692.1 mouse_genomes_project 2 185156828 185162106 - Acot8 protein_coding retained_intron MGP_NODShiLtJ_T0010295.1 MGP_NODShiLtJ_G0008428.1 mouse_genomes_project 2 32259711 32259774 + Mir7674 miRNA miRNA MGP_NODShiLtJ_T0098308.1 MGP_NODShiLtJ_G0036714.1 mouse_genomes_project 2 152793462 152794435 + Gm14209 sense_intronic sense_intronic MGP_NODShiLtJ_T0052273.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9732973 9733957 + MGP_NODShiLtJ_P0052273 Ankrd16 protein_coding protein_coding MGP_NODShiLtJ_T0052274.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9733588 9754090 + MGP_NODShiLtJ_P0052274 Ankrd16 protein_coding protein_coding MGP_NODShiLtJ_T0052275.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9733621 9754094 + Ankrd16 protein_coding retained_intron MGP_NODShiLtJ_T0052276.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9733624 9754068 + Ankrd16 protein_coding retained_intron MGP_NODShiLtJ_T0052277.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9733661 9754090 + MGP_NODShiLtJ_P0052277 Ankrd16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052278.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9733669 9736366 + Ankrd16 protein_coding retained_intron MGP_NODShiLtJ_T0052279.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9734982 9753533 + MGP_NODShiLtJ_P0052279 Ankrd16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052280.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9738386 9754085 + Ankrd16 protein_coding retained_intron MGP_NODShiLtJ_T0052281.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9738406 9753679 + Ankrd16 protein_coding retained_intron MGP_NODShiLtJ_T0052282.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9739316 9754066 + Ankrd16 protein_coding retained_intron MGP_NODShiLtJ_T0052283.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9739404 9754061 + MGP_NODShiLtJ_P0052283 Ankrd16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052284.1 MGP_NODShiLtJ_G0025187.1 mouse_genomes_project 2 9741245 9753887 + Ankrd16 protein_coding retained_intron MGP_NODShiLtJ_T0057865.1 MGP_NODShiLtJ_G0026448.1 mouse_genomes_project 2 169556670 169620044 - MGP_NODShiLtJ_P0057865 Acss1 protein_coding protein_coding MGP_NODShiLtJ_T0057866.1 MGP_NODShiLtJ_G0026448.1 mouse_genomes_project 2 169566798 169576926 - Acss1 protein_coding processed_transcript MGP_NODShiLtJ_T0057867.1 MGP_NODShiLtJ_G0026448.1 mouse_genomes_project 2 169566878 169576924 - Acss1 protein_coding processed_transcript MGP_NODShiLtJ_T0057868.1 MGP_NODShiLtJ_G0026448.1 mouse_genomes_project 2 169576789 169620289 - Acss1 protein_coding processed_transcript MGP_NODShiLtJ_T0057869.1 MGP_NODShiLtJ_G0026448.1 mouse_genomes_project 2 169609549 169620000 - Acss1 protein_coding retained_intron MGP_NODShiLtJ_T0013644.1 MGP_NODShiLtJ_G0011752.1 mouse_genomes_project 2 147489334 147490602 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007323.1 MGP_NODShiLtJ_G0005996.1 mouse_genomes_project 2 181380121 181381061 + Gm14241 lincRNA lincRNA MGP_NODShiLtJ_T0057840.1 MGP_NODShiLtJ_G0026437.1 mouse_genomes_project 2 167515186 167519055 - MGP_NODShiLtJ_P0057840 Cst3 protein_coding protein_coding MGP_NODShiLtJ_T0057841.1 MGP_NODShiLtJ_G0026437.1 mouse_genomes_project 2 167515934 167518930 - Cst3 protein_coding processed_transcript MGP_NODShiLtJ_T0057842.1 MGP_NODShiLtJ_G0026437.1 mouse_genomes_project 2 167516310 167519171 - MGP_NODShiLtJ_P0057842 Cst3 protein_coding protein_coding MGP_NODShiLtJ_T0007351.1 MGP_NODShiLtJ_G0006020.1 mouse_genomes_project 2 189862510 189863149 + 1700017J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0013549.1 MGP_NODShiLtJ_G0011657.1 mouse_genomes_project 2 103218382 103218715 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003979.1 MGP_NODShiLtJ_G0003533.1 mouse_genomes_project 2 99280654 99293922 - antisense antisense MGP_NODShiLtJ_T0101829.1 MGP_NODShiLtJ_G0039997.1 mouse_genomes_project 2 98859130 98860170 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0053252.1 MGP_NODShiLtJ_G0025364.1 mouse_genomes_project 2 28450658 28458226 - MGP_NODShiLtJ_P0053252 Cel protein_coding protein_coding MGP_NODShiLtJ_T0053253.1 MGP_NODShiLtJ_G0025364.1 mouse_genomes_project 2 28455380 28458267 - Cel protein_coding processed_transcript MGP_NODShiLtJ_T0052993.1 MGP_NODShiLtJ_G0025319.1 mouse_genomes_project 2 25981851 25987649 - MGP_NODShiLtJ_P0052993 C030048H21Rik protein_coding protein_coding MGP_NODShiLtJ_T0007133.1 MGP_NODShiLtJ_G0005841.1 mouse_genomes_project 2 47914454 47964747 + Gm13479 lincRNA lincRNA MGP_NODShiLtJ_T0058554.1 MGP_NODShiLtJ_G0026602.1 mouse_genomes_project 2 177114774 177171952 + MGP_NODShiLtJ_P0058554 Src protein_coding protein_coding MGP_NODShiLtJ_T0058555.1 MGP_NODShiLtJ_G0026602.1 mouse_genomes_project 2 177121773 177154786 + Src protein_coding processed_transcript MGP_NODShiLtJ_T0058556.1 MGP_NODShiLtJ_G0026602.1 mouse_genomes_project 2 177121937 177171979 + MGP_NODShiLtJ_P0058556 Src protein_coding protein_coding MGP_NODShiLtJ_T0058557.1 MGP_NODShiLtJ_G0026602.1 mouse_genomes_project 2 177122049 177158703 + Src protein_coding processed_transcript MGP_NODShiLtJ_T0058558.1 MGP_NODShiLtJ_G0026602.1 mouse_genomes_project 2 177122049 177154685 + Src protein_coding processed_transcript MGP_NODShiLtJ_T0058559.1 MGP_NODShiLtJ_G0026602.1 mouse_genomes_project 2 177122511 177171962 + MGP_NODShiLtJ_P0058559 Src protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058560.1 MGP_NODShiLtJ_G0026602.1 mouse_genomes_project 2 177154749 177171955 + MGP_NODShiLtJ_P0058560 Src protein_coding protein_coding MGP_NODShiLtJ_T0007214.1 MGP_NODShiLtJ_G0005908.1 mouse_genomes_project 2 107224563 107227069 + Gm13799 lincRNA lincRNA MGP_NODShiLtJ_T0007194.1 MGP_NODShiLtJ_G0005892.1 mouse_genomes_project 2 90748037 90767120 - A130030D18Rik lincRNA lincRNA MGP_NODShiLtJ_T0055490.1 MGP_NODShiLtJ_G0025825.1 mouse_genomes_project 2 96671945 96672884 - MGP_NODShiLtJ_P0055490 Olfr1107 protein_coding protein_coding MGP_NODShiLtJ_T0054409.1 MGP_NODShiLtJ_G0025559.1 mouse_genomes_project 2 53230137 53390058 + MGP_NODShiLtJ_P0054409 Kif5c protein_coding protein_coding MGP_NODShiLtJ_T0054410.1 MGP_NODShiLtJ_G0025559.1 mouse_genomes_project 2 53313738 53345545 + MGP_NODShiLtJ_P0054410 Kif5c protein_coding protein_coding MGP_NODShiLtJ_T0054411.1 MGP_NODShiLtJ_G0025559.1 mouse_genomes_project 2 53337860 53350878 + Kif5c protein_coding processed_transcript MGP_NODShiLtJ_T0054412.1 MGP_NODShiLtJ_G0025559.1 mouse_genomes_project 2 53347904 53350869 + Kif5c protein_coding processed_transcript MGP_NODShiLtJ_T0054413.1 MGP_NODShiLtJ_G0025559.1 mouse_genomes_project 2 53359818 53372681 + Kif5c protein_coding processed_transcript MGP_NODShiLtJ_T0054414.1 MGP_NODShiLtJ_G0025559.1 mouse_genomes_project 2 53367483 53374202 + Kif5c protein_coding processed_transcript MGP_NODShiLtJ_T0052740.1 MGP_NODShiLtJ_G0025268.1 mouse_genomes_project 2 24883623 24884766 + MGP_NODShiLtJ_P0052740 Rnf208 protein_coding protein_coding MGP_NODShiLtJ_T0052741.1 MGP_NODShiLtJ_G0025268.1 mouse_genomes_project 2 24884297 24885630 + MGP_NODShiLtJ_P0052741 Rnf208 protein_coding protein_coding MGP_NODShiLtJ_T0052742.1 MGP_NODShiLtJ_G0025268.1 mouse_genomes_project 2 24884306 24885631 + MGP_NODShiLtJ_P0052742 Rnf208 protein_coding protein_coding MGP_NODShiLtJ_T0003860.1 MGP_NODShiLtJ_G0003448.1 mouse_genomes_project 2 24818433 24820992 - Gm38287 antisense antisense MGP_NODShiLtJ_T0010289.1 MGP_NODShiLtJ_G0008422.1 mouse_genomes_project 2 29851993 29852090 - Mir219a-2 miRNA miRNA MGP_NODShiLtJ_T0007228.1 MGP_NODShiLtJ_G0005919.1 mouse_genomes_project 2 119945088 120009248 - Gm14015 lincRNA lincRNA MGP_NODShiLtJ_T0052336.1 MGP_NODShiLtJ_G0025195.1 mouse_genomes_project 2 11742838 11743745 + MGP_NODShiLtJ_P0052336 Vim protein_coding protein_coding MGP_NODShiLtJ_T0052337.1 MGP_NODShiLtJ_G0025195.1 mouse_genomes_project 2 11742863 11751730 + MGP_NODShiLtJ_P0052337 Vim protein_coding protein_coding MGP_NODShiLtJ_T0052338.1 MGP_NODShiLtJ_G0025195.1 mouse_genomes_project 2 11743192 11751729 + MGP_NODShiLtJ_P0052338 Vim protein_coding protein_coding MGP_NODShiLtJ_T0052339.1 MGP_NODShiLtJ_G0025195.1 mouse_genomes_project 2 11743233 11747516 + Vim protein_coding retained_intron MGP_NODShiLtJ_T0052340.1 MGP_NODShiLtJ_G0025195.1 mouse_genomes_project 2 11743434 11746360 + Vim protein_coding retained_intron MGP_NODShiLtJ_T0052341.1 MGP_NODShiLtJ_G0025195.1 mouse_genomes_project 2 11748274 11751382 + Vim protein_coding retained_intron MGP_NODShiLtJ_T0057090.1 MGP_NODShiLtJ_G0026258.1 mouse_genomes_project 2 142929735 142954318 - MGP_NODShiLtJ_P0057090 Hdc protein_coding protein_coding MGP_NODShiLtJ_T0057091.1 MGP_NODShiLtJ_G0026258.1 mouse_genomes_project 2 142930652 142934301 - Hdc protein_coding processed_transcript MGP_NODShiLtJ_T0057092.1 MGP_NODShiLtJ_G0026258.1 mouse_genomes_project 2 142936275 142954301 - Hdc protein_coding retained_intron MGP_NODShiLtJ_T0057093.1 MGP_NODShiLtJ_G0026258.1 mouse_genomes_project 2 142941564 142944877 - Hdc protein_coding processed_transcript MGP_NODShiLtJ_T0057094.1 MGP_NODShiLtJ_G0026258.1 mouse_genomes_project 2 142951809 142954939 - Hdc protein_coding processed_transcript MGP_NODShiLtJ_T0007102.1 MGP_NODShiLtJ_G0005818.1 mouse_genomes_project 2 25250511 25255180 + Gm26702 lincRNA lincRNA MGP_NODShiLtJ_T0004062.1 MGP_NODShiLtJ_G0003587.1 mouse_genomes_project 2 162637887 162639068 + 1700108N11Rik antisense antisense MGP_NODShiLtJ_T0054059.1 MGP_NODShiLtJ_G0025481.1 mouse_genomes_project 2 35280214 35308068 - MGP_NODShiLtJ_P0054059 Psmd5 protein_coding protein_coding MGP_NODShiLtJ_T0054060.1 MGP_NODShiLtJ_G0025481.1 mouse_genomes_project 2 35282642 35308039 - Psmd5 protein_coding retained_intron MGP_NODShiLtJ_T0054061.1 MGP_NODShiLtJ_G0025481.1 mouse_genomes_project 2 35282983 35289482 - MGP_NODShiLtJ_P0054061 Psmd5 protein_coding protein_coding MGP_NODShiLtJ_T0054062.1 MGP_NODShiLtJ_G0025481.1 mouse_genomes_project 2 35304044 35313612 - Psmd5 protein_coding processed_transcript MGP_NODShiLtJ_T0054063.1 MGP_NODShiLtJ_G0025481.1 mouse_genomes_project 2 35308213 35309316 - Psmd5 protein_coding processed_transcript MGP_NODShiLtJ_T0056598.1 MGP_NODShiLtJ_G0026165.1 mouse_genomes_project 2 135251801 135318170 + MGP_NODShiLtJ_P0056598 Rtf1 protein_coding protein_coding MGP_NODShiLtJ_T0056599.1 MGP_NODShiLtJ_G0026165.1 mouse_genomes_project 2 135251830 135270152 + Rtf1 protein_coding processed_transcript MGP_NODShiLtJ_T0056600.1 MGP_NODShiLtJ_G0026165.1 mouse_genomes_project 2 135289338 135290719 + Rtf1 protein_coding retained_intron MGP_NODShiLtJ_T0056601.1 MGP_NODShiLtJ_G0026165.1 mouse_genomes_project 2 135308190 135309153 + Rtf1 protein_coding retained_intron MGP_NODShiLtJ_T0055468.1 MGP_NODShiLtJ_G0025803.1 mouse_genomes_project 2 95652476 95653418 - MGP_NODShiLtJ_P0055468 Olfr1061 protein_coding protein_coding MGP_NODShiLtJ_T0057564.1 MGP_NODShiLtJ_G0026367.1 mouse_genomes_project 2 149685180 149729723 - Fermt1 protein_coding retained_intron MGP_NODShiLtJ_T0057565.1 MGP_NODShiLtJ_G0026367.1 mouse_genomes_project 2 149685180 149730000 - MGP_NODShiLtJ_P0057565 Fermt1 protein_coding protein_coding MGP_NODShiLtJ_T0057566.1 MGP_NODShiLtJ_G0026367.1 mouse_genomes_project 2 149719278 149725263 - Fermt1 protein_coding processed_transcript MGP_NODShiLtJ_T0057567.1 MGP_NODShiLtJ_G0026367.1 mouse_genomes_project 2 149722261 149725129 - Fermt1 protein_coding processed_transcript MGP_NODShiLtJ_T0052591.1 MGP_NODShiLtJ_G0025245.1 mouse_genomes_project 2 23839313 23841938 + MGP_NODShiLtJ_P0052591 Il1f10 protein_coding protein_coding MGP_NODShiLtJ_T0007156.1 MGP_NODShiLtJ_G0005861.1 mouse_genomes_project 2 68072044 68075757 - Gm13564 lincRNA lincRNA MGP_NODShiLtJ_T0007077.1 MGP_NODShiLtJ_G0005800.1 mouse_genomes_project 2 7094783 7154306 + Gm13219 lincRNA lincRNA MGP_NODShiLtJ_T0007078.1 MGP_NODShiLtJ_G0005800.1 mouse_genomes_project 2 7094842 7219442 + Gm13219 lincRNA lincRNA MGP_NODShiLtJ_T0007079.1 MGP_NODShiLtJ_G0005800.1 mouse_genomes_project 2 7094872 7157318 + Gm13219 lincRNA lincRNA MGP_NODShiLtJ_T0013678.1 MGP_NODShiLtJ_G0011786.1 mouse_genomes_project 2 162564757 162565065 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099105.1 MGP_NODShiLtJ_G0037499.1 mouse_genomes_project 2 39916136 39916243 + Gm26127 snRNA snRNA MGP_NODShiLtJ_T0056198.1 MGP_NODShiLtJ_G0026043.1 mouse_genomes_project 2 117994194 117996605 - MGP_NODShiLtJ_P0056198 Pin1rt1 protein_coding protein_coding MGP_NODShiLtJ_T0053644.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31273593 31340539 + MGP_NODShiLtJ_P0053644 Gpr107 protein_coding protein_coding MGP_NODShiLtJ_T0053645.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31273610 31293004 + Gpr107 protein_coding retained_intron MGP_NODShiLtJ_T0053646.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31273628 31315906 + Gpr107 protein_coding retained_intron MGP_NODShiLtJ_T0053647.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31273628 31276842 + Gpr107 protein_coding retained_intron MGP_NODShiLtJ_T0053648.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31296199 31308687 + Gpr107 protein_coding processed_transcript MGP_NODShiLtJ_T0053649.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31309110 31330920 + Gpr107 protein_coding retained_intron MGP_NODShiLtJ_T0053650.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31309440 31312541 + Gpr107 protein_coding processed_transcript MGP_NODShiLtJ_T0053651.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31312559 31331102 + Gpr107 protein_coding retained_intron MGP_NODShiLtJ_T0053652.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31320535 31329469 + Gpr107 protein_coding processed_transcript MGP_NODShiLtJ_T0053653.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31328391 31331823 + Gpr107 protein_coding retained_intron MGP_NODShiLtJ_T0053654.1 MGP_NODShiLtJ_G0025420.1 mouse_genomes_project 2 31331860 31336329 + Gpr107 protein_coding retained_intron MGP_NODShiLtJ_T0056941.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137736624 137812500 + MGP_NODShiLtJ_P0056941 Ctdspl2 protein_coding protein_coding MGP_NODShiLtJ_T0056942.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137737038 137811247 + MGP_NODShiLtJ_P0056942 Ctdspl2 protein_coding protein_coding MGP_NODShiLtJ_T0056943.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137737087 137787338 + Ctdspl2 protein_coding retained_intron MGP_NODShiLtJ_T0056944.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137737107 137811471 + Ctdspl2 protein_coding processed_transcript MGP_NODShiLtJ_T0056945.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137737113 137786967 + Ctdspl2 protein_coding processed_transcript MGP_NODShiLtJ_T0056946.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137737113 137782076 + Ctdspl2 protein_coding retained_intron MGP_NODShiLtJ_T0056947.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137737120 137814181 + MGP_NODShiLtJ_P0056947 Ctdspl2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056948.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137737286 137809585 + MGP_NODShiLtJ_P0056948 Ctdspl2 protein_coding protein_coding MGP_NODShiLtJ_T0056949.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137754483 137812447 + MGP_NODShiLtJ_P0056949 Ctdspl2 protein_coding protein_coding MGP_NODShiLtJ_T0056950.1 MGP_NODShiLtJ_G0026218.1 mouse_genomes_project 2 137766364 137802495 + Ctdspl2 protein_coding retained_intron MGP_NODShiLtJ_T0055091.1 MGP_NODShiLtJ_G0025689.1 mouse_genomes_project 2 81996492 82013418 + Hoxd4 protein_coding processed_transcript MGP_NODShiLtJ_T0055092.1 MGP_NODShiLtJ_G0025689.1 mouse_genomes_project 2 82006534 82013710 + MGP_NODShiLtJ_P0055092 Hoxd4 protein_coding protein_coding MGP_NODShiLtJ_T0055094.1 MGP_NODShiLtJ_G0025689.1 mouse_genomes_project 2 82011629 82013673 + MGP_NODShiLtJ_P0055094 Hoxd4 protein_coding protein_coding MGP_NODShiLtJ_T0013685.1 MGP_NODShiLtJ_G0011793.1 mouse_genomes_project 2 165659079 165659880 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013540.1 MGP_NODShiLtJ_G0011648.1 mouse_genomes_project 2 97874851 97875378 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101824.1 MGP_NODShiLtJ_G0039992.1 mouse_genomes_project 2 98024028 98024920 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101811.1 MGP_NODShiLtJ_G0039979.1 mouse_genomes_project 2 95738926 95739869 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013304.1 MGP_NODShiLtJ_G0011412.1 mouse_genomes_project 2 8766761 8767182 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059403.1 MGP_NODShiLtJ_G0026807.1 mouse_genomes_project 2 201770345 201789062 - MGP_NODShiLtJ_P0059403 Cables2 protein_coding protein_coding MGP_NODShiLtJ_T0059404.1 MGP_NODShiLtJ_G0026807.1 mouse_genomes_project 2 201770348 201789029 - Cables2 protein_coding retained_intron MGP_NODShiLtJ_T0059405.1 MGP_NODShiLtJ_G0026807.1 mouse_genomes_project 2 201773774 201789021 - MGP_NODShiLtJ_P0059405 Cables2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059406.1 MGP_NODShiLtJ_G0026807.1 mouse_genomes_project 2 201774132 201777331 - Cables2 protein_coding retained_intron MGP_NODShiLtJ_T0059407.1 MGP_NODShiLtJ_G0026807.1 mouse_genomes_project 2 201777697 201789062 - Cables2 protein_coding retained_intron MGP_NODShiLtJ_T0059408.1 MGP_NODShiLtJ_G0026807.1 mouse_genomes_project 2 201778420 201789012 - Cables2 protein_coding retained_intron MGP_NODShiLtJ_T0013743.1 MGP_NODShiLtJ_G0011851.1 mouse_genomes_project 2 186467582 186468144 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010284.1 MGP_NODShiLtJ_G0008417.1 mouse_genomes_project 2 26338808 26338866 - Mir126b miRNA miRNA MGP_NODShiLtJ_T0001040.1 MGP_NODShiLtJ_G0000966.1 mouse_genomes_project 2 35740066 35741687 + TEC TEC MGP_NODShiLtJ_T0057901.1 MGP_NODShiLtJ_G0026456.1 mouse_genomes_project 2 169997312 170013047 - MGP_NODShiLtJ_P0057901 protein_coding protein_coding MGP_NODShiLtJ_T0007187.1 MGP_NODShiLtJ_G0005887.1 mouse_genomes_project 2 83113194 83113774 - Gm13656 lincRNA lincRNA MGP_NODShiLtJ_T0058490.1 MGP_NODShiLtJ_G0026589.1 mouse_genomes_project 2 176465665 176466996 - MGP_NODShiLtJ_P0058490 4930518I15Rik protein_coding protein_coding MGP_NODShiLtJ_T0017632.1 MGP_NODShiLtJ_G0015290.1 mouse_genomes_project 2 62261559 62266298 + 4930555B11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0101838.1 MGP_NODShiLtJ_G0040006.1 mouse_genomes_project 2 134825802 134826043 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0053906.1 MGP_NODShiLtJ_G0025459.1 mouse_genomes_project 2 33037300 33056198 - MGP_NODShiLtJ_P0053906 Ttc16 protein_coding protein_coding MGP_NODShiLtJ_T0053915.1 MGP_NODShiLtJ_G0025459.1 mouse_genomes_project 2 33042984 33056399 - MGP_NODShiLtJ_P0053915 Ttc16 protein_coding protein_coding MGP_NODShiLtJ_T0053916.1 MGP_NODShiLtJ_G0025459.1 mouse_genomes_project 2 33043147 33056163 - MGP_NODShiLtJ_P0053916 Ttc16 protein_coding protein_coding MGP_NODShiLtJ_T0053917.1 MGP_NODShiLtJ_G0025459.1 mouse_genomes_project 2 33044935 33056448 - MGP_NODShiLtJ_P0053917 Ttc16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053918.1 MGP_NODShiLtJ_G0025459.1 mouse_genomes_project 2 33053574 33056402 - Ttc16 protein_coding retained_intron MGP_NODShiLtJ_T0053919.1 MGP_NODShiLtJ_G0025459.1 mouse_genomes_project 2 33055321 33056446 - MGP_NODShiLtJ_P0053919 Ttc16 protein_coding protein_coding MGP_NODShiLtJ_T0013296.1 MGP_NODShiLtJ_G0011404.1 mouse_genomes_project 2 2423230 2423455 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007144.1 MGP_NODShiLtJ_G0005851.1 mouse_genomes_project 2 55175743 55177926 - Gm13499 lincRNA lincRNA MGP_NODShiLtJ_T0013532.1 MGP_NODShiLtJ_G0011640.1 mouse_genomes_project 2 97069307 97069539 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058445.1 MGP_NODShiLtJ_G0026583.1 mouse_genomes_project 2 175885520 175948239 + MGP_NODShiLtJ_P0058445 Cnbd2 protein_coding protein_coding MGP_NODShiLtJ_T0058446.1 MGP_NODShiLtJ_G0026583.1 mouse_genomes_project 2 175885799 175913750 + Cnbd2 protein_coding processed_transcript MGP_NODShiLtJ_T0058447.1 MGP_NODShiLtJ_G0026583.1 mouse_genomes_project 2 175885838 175894033 + Cnbd2 protein_coding retained_intron MGP_NODShiLtJ_T0058448.1 MGP_NODShiLtJ_G0026583.1 mouse_genomes_project 2 175885854 175948242 + MGP_NODShiLtJ_P0058448 Cnbd2 protein_coding protein_coding MGP_NODShiLtJ_T0058449.1 MGP_NODShiLtJ_G0026583.1 mouse_genomes_project 2 175908970 175914352 + Cnbd2 protein_coding processed_transcript MGP_NODShiLtJ_T0056656.1 MGP_NODShiLtJ_G0026174.1 mouse_genomes_project 2 135646656 135655191 + protein_coding retained_intron MGP_NODShiLtJ_T0056657.1 MGP_NODShiLtJ_G0026174.1 mouse_genomes_project 2 135646672 135656252 + protein_coding retained_intron MGP_NODShiLtJ_T0056658.1 MGP_NODShiLtJ_G0026174.1 mouse_genomes_project 2 135646672 135655190 + MGP_NODShiLtJ_P0056658 protein_coding protein_coding MGP_NODShiLtJ_T0056659.1 MGP_NODShiLtJ_G0026174.1 mouse_genomes_project 2 135647782 135649357 + protein_coding retained_intron MGP_NODShiLtJ_T0056660.1 MGP_NODShiLtJ_G0026174.1 mouse_genomes_project 2 135652094 135653674 + protein_coding retained_intron MGP_NODShiLtJ_T0056661.1 MGP_NODShiLtJ_G0026174.1 mouse_genomes_project 2 135654195 135654916 + protein_coding retained_intron MGP_NODShiLtJ_T0099104.1 MGP_NODShiLtJ_G0037498.1 mouse_genomes_project 2 39317542 39317650 + Gm25081 snRNA snRNA MGP_NODShiLtJ_T0100351.1 MGP_NODShiLtJ_G0038745.1 mouse_genomes_project 2 26676883 26676954 + Gm24134 snoRNA snoRNA MGP_NODShiLtJ_T0013727.1 MGP_NODShiLtJ_G0011835.1 mouse_genomes_project 2 178176612 178176901 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052791.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 24999805 25003875 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0052792.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 24999816 25003861 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0052793.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 24999819 25000404 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0052794.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 24999819 25003889 - MGP_NODShiLtJ_P0052794 Dpp7 protein_coding protein_coding MGP_NODShiLtJ_T0052795.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 25000683 25003588 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0052796.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 25000889 25003827 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0052797.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 25001997 25003827 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0052798.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 25002526 25003883 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0052799.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 25002971 25003876 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0052800.1 MGP_NODShiLtJ_G0025278.1 mouse_genomes_project 2 25003232 25003862 - Dpp7 protein_coding processed_transcript MGP_NODShiLtJ_T0057217.1 MGP_NODShiLtJ_G0026288.1 mouse_genomes_project 2 144566236 144570214 + Bcl2l11 protein_coding processed_transcript MGP_NODShiLtJ_T0057218.1 MGP_NODShiLtJ_G0026288.1 mouse_genomes_project 2 144566236 144571694 + MGP_NODShiLtJ_P0057218 Bcl2l11 protein_coding protein_coding MGP_NODShiLtJ_T0057219.1 MGP_NODShiLtJ_G0026288.1 mouse_genomes_project 2 144566236 144602284 + MGP_NODShiLtJ_P0057219 Bcl2l11 protein_coding protein_coding MGP_NODShiLtJ_T0057220.1 MGP_NODShiLtJ_G0026288.1 mouse_genomes_project 2 144566237 144603870 + MGP_NODShiLtJ_P0057220 Bcl2l11 protein_coding protein_coding MGP_NODShiLtJ_T0057221.1 MGP_NODShiLtJ_G0026288.1 mouse_genomes_project 2 144566238 144599773 + MGP_NODShiLtJ_P0057221 Bcl2l11 protein_coding protein_coding MGP_NODShiLtJ_T0057222.1 MGP_NODShiLtJ_G0026288.1 mouse_genomes_project 2 144566248 144602551 + MGP_NODShiLtJ_P0057222 Bcl2l11 protein_coding protein_coding MGP_NODShiLtJ_T0057223.1 MGP_NODShiLtJ_G0026288.1 mouse_genomes_project 2 144567773 144570344 + Bcl2l11 protein_coding processed_transcript MGP_NODShiLtJ_T0057224.1 MGP_NODShiLtJ_G0026288.1 mouse_genomes_project 2 144568329 144568936 + Bcl2l11 protein_coding processed_transcript MGP_NODShiLtJ_T0001078.1 MGP_NODShiLtJ_G0001003.1 mouse_genomes_project 2 190920613 190921786 - TEC TEC MGP_NODShiLtJ_T0001079.1 MGP_NODShiLtJ_G0001003.1 mouse_genomes_project 2 190920726 190921586 - TEC TEC MGP_NODShiLtJ_T0004090.1 MGP_NODShiLtJ_G0003613.1 mouse_genomes_project 2 178395344 178396255 - Gm14205 antisense antisense MGP_NODShiLtJ_T0003972.1 MGP_NODShiLtJ_G0003528.1 mouse_genomes_project 2 84965581 84984411 + Gm13944 antisense antisense MGP_NODShiLtJ_T0003973.1 MGP_NODShiLtJ_G0003528.1 mouse_genomes_project 2 84965589 84984756 + Gm13944 antisense antisense MGP_NODShiLtJ_T0052464.1 MGP_NODShiLtJ_G0025219.1 mouse_genomes_project 2 18276437 18288190 + Msrb2 protein_coding processed_transcript MGP_NODShiLtJ_T0052465.1 MGP_NODShiLtJ_G0025219.1 mouse_genomes_project 2 18276633 18302472 + MGP_NODShiLtJ_P0052465 Msrb2 protein_coding protein_coding MGP_NODShiLtJ_T0052466.1 MGP_NODShiLtJ_G0025219.1 mouse_genomes_project 2 18276665 18300816 + Msrb2 protein_coding processed_transcript MGP_NODShiLtJ_T0052467.1 MGP_NODShiLtJ_G0025219.1 mouse_genomes_project 2 18276838 18301760 + Msrb2 protein_coding processed_transcript MGP_NODShiLtJ_T0059515.1 MGP_NODShiLtJ_G0026829.1 mouse_genomes_project 2 202762502 202771570 - MGP_NODShiLtJ_P0059515 Ptk6 protein_coding protein_coding MGP_NODShiLtJ_T0010310.1 MGP_NODShiLtJ_G0008443.1 mouse_genomes_project 2 47559922 47560000 - Mir5129 miRNA miRNA MGP_NODShiLtJ_T0013682.1 MGP_NODShiLtJ_G0011790.1 mouse_genomes_project 2 163902667 163903131 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054896.1 MGP_NODShiLtJ_G0025649.1 mouse_genomes_project 2 77560060 77560921 - MGP_NODShiLtJ_P0054896 Gm26558 protein_coding protein_coding MGP_NODShiLtJ_T0059367.1 MGP_NODShiLtJ_G0026800.1 mouse_genomes_project 2 201542152 201570350 + MGP_NODShiLtJ_P0059367 Ss18l1 protein_coding protein_coding MGP_NODShiLtJ_T0013442.1 MGP_NODShiLtJ_G0011550.1 mouse_genomes_project 2 64356237 64356762 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004094.1 MGP_NODShiLtJ_G0003617.1 mouse_genomes_project 2 183634389 183634956 + 2900093K20Rik antisense antisense MGP_NODShiLtJ_T0010357.1 MGP_NODShiLtJ_G0008490.1 mouse_genomes_project 2 147935303 147935389 + Mir103-2 miRNA miRNA MGP_NODShiLtJ_T0055957.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104493754 104538351 - MGP_NODShiLtJ_P0055957 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0055958.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104493754 104538442 - MGP_NODShiLtJ_P0055958 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0055959.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104493759 104538886 - MGP_NODShiLtJ_P0055959 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0055960.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104493797 104494930 - Cd82 protein_coding processed_transcript MGP_NODShiLtJ_T0055961.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104494472 104528614 - MGP_NODShiLtJ_P0055961 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0055962.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104495299 104538326 - MGP_NODShiLtJ_P0055962 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0055963.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104496469 104528618 - MGP_NODShiLtJ_P0055963 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0055964.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104496469 104537852 - MGP_NODShiLtJ_P0055964 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0055965.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104504744 104539080 - MGP_NODShiLtJ_P0055965 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0055966.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104508069 104538383 - Cd82 protein_coding processed_transcript MGP_NODShiLtJ_T0055967.1 MGP_NODShiLtJ_G0025999.1 mouse_genomes_project 2 104511971 104538852 - MGP_NODShiLtJ_P0055967 Cd82 protein_coding protein_coding MGP_NODShiLtJ_T0010322.1 MGP_NODShiLtJ_G0008455.1 mouse_genomes_project 2 83906366 83906471 + Gm23164 miRNA miRNA MGP_NODShiLtJ_T0003884.1 MGP_NODShiLtJ_G0003463.1 mouse_genomes_project 2 29878176 29879771 - 2600006K01Rik antisense antisense MGP_NODShiLtJ_T0054182.1 MGP_NODShiLtJ_G0025505.1 mouse_genomes_project 2 37009192 37010134 - MGP_NODShiLtJ_P0054182 Olfr341 protein_coding protein_coding MGP_NODShiLtJ_T0011401.1 MGP_NODShiLtJ_G0009534.1 mouse_genomes_project 2 132284112 132284425 + Gm24914 misc_RNA misc_RNA MGP_NODShiLtJ_T0057816.1 MGP_NODShiLtJ_G0026424.1 mouse_genomes_project 2 167030267 167033986 - MGP_NODShiLtJ_P0057816 Thbd protein_coding protein_coding MGP_NODShiLtJ_T0055600.1 MGP_NODShiLtJ_G0025922.1 mouse_genomes_project 2 99817151 99818096 - MGP_NODShiLtJ_P0055600 Olfr1234 protein_coding protein_coding MGP_NODShiLtJ_T0055601.1 MGP_NODShiLtJ_G0025922.1 mouse_genomes_project 2 99817151 99821382 - MGP_NODShiLtJ_P0055601 Olfr1234 protein_coding protein_coding MGP_NODShiLtJ_T0056648.1 MGP_NODShiLtJ_G0026173.1 mouse_genomes_project 2 135640874 135656255 + MGP_NODShiLtJ_P0056648 Gm28042 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056650.1 MGP_NODShiLtJ_G0026173.1 mouse_genomes_project 2 135640885 135656255 + MGP_NODShiLtJ_P0056650 Gm28042 protein_coding protein_coding MGP_NODShiLtJ_T0056651.1 MGP_NODShiLtJ_G0026173.1 mouse_genomes_project 2 135640888 135654821 + MGP_NODShiLtJ_P0056651 Gm28042 protein_coding protein_coding MGP_NODShiLtJ_T0056655.1 MGP_NODShiLtJ_G0026173.1 mouse_genomes_project 2 135645095 135648233 + MGP_NODShiLtJ_P0056655 Gm28042 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057187.1 MGP_NODShiLtJ_G0026279.1 mouse_genomes_project 2 143933470 143948423 - MGP_NODShiLtJ_P0057187 Prom2 protein_coding protein_coding MGP_NODShiLtJ_T0057188.1 MGP_NODShiLtJ_G0026279.1 mouse_genomes_project 2 143933952 143948341 - MGP_NODShiLtJ_P0057188 Prom2 protein_coding protein_coding MGP_NODShiLtJ_T0057189.1 MGP_NODShiLtJ_G0026279.1 mouse_genomes_project 2 143941721 143942153 - Prom2 protein_coding processed_transcript MGP_NODShiLtJ_T0057190.1 MGP_NODShiLtJ_G0026279.1 mouse_genomes_project 2 143947194 143948370 - Prom2 protein_coding retained_intron MGP_NODShiLtJ_T0057014.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140230436 140290484 + Sema6d protein_coding retained_intron MGP_NODShiLtJ_T0057015.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140230436 140851396 + MGP_NODShiLtJ_P0057015 Sema6d protein_coding protein_coding MGP_NODShiLtJ_T0057016.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140290135 140685869 + Sema6d protein_coding processed_transcript MGP_NODShiLtJ_T0057017.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140792137 140846530 + Sema6d protein_coding retained_intron MGP_NODShiLtJ_T0057018.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140792327 140849596 + MGP_NODShiLtJ_P0057018 Sema6d protein_coding protein_coding MGP_NODShiLtJ_T0057019.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140792327 140851396 + MGP_NODShiLtJ_P0057019 Sema6d protein_coding protein_coding MGP_NODShiLtJ_T0057020.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140792327 140851396 + MGP_NODShiLtJ_P0057020 Sema6d protein_coding protein_coding MGP_NODShiLtJ_T0057021.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140792327 140851396 + MGP_NODShiLtJ_P0057021 Sema6d protein_coding protein_coding MGP_NODShiLtJ_T0057022.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140792632 140849596 + MGP_NODShiLtJ_P0057022 Sema6d protein_coding protein_coding MGP_NODShiLtJ_T0057023.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140837059 140848954 + MGP_NODShiLtJ_P0057023 Sema6d protein_coding unknown_likely_coding MGP_NODShiLtJ_T0057024.1 MGP_NODShiLtJ_G0026239.1 mouse_genomes_project 2 140837282 140848954 + MGP_NODShiLtJ_P0057024 Sema6d protein_coding protein_coding MGP_NODShiLtJ_T0055043.1 MGP_NODShiLtJ_G0025676.1 mouse_genomes_project 2 80736170 80755494 - MGP_NODShiLtJ_P0055043 Chrna1 protein_coding protein_coding MGP_NODShiLtJ_T0007114.1 MGP_NODShiLtJ_G0005827.1 mouse_genomes_project 2 30724153 30735579 - Gm14486 lincRNA lincRNA MGP_NODShiLtJ_T0007115.1 MGP_NODShiLtJ_G0005827.1 mouse_genomes_project 2 30724298 30743660 - Gm14486 lincRNA lincRNA MGP_NODShiLtJ_T0100384.1 MGP_NODShiLtJ_G0038778.1 mouse_genomes_project 2 109139556 109139685 - Gm23317 snoRNA snoRNA MGP_NODShiLtJ_T0056987.1 MGP_NODShiLtJ_G0026233.1 mouse_genomes_project 2 138278897 138280442 + protein_coding retained_intron MGP_NODShiLtJ_T0013382.1 MGP_NODShiLtJ_G0011490.1 mouse_genomes_project 2 39327256 39327391 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052801.1 MGP_NODShiLtJ_G0025279.1 mouse_genomes_project 2 25009017 25014825 - MGP_NODShiLtJ_P0052801 Uap1l1 protein_coding protein_coding MGP_NODShiLtJ_T0052802.1 MGP_NODShiLtJ_G0025279.1 mouse_genomes_project 2 25010617 25011861 - Uap1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0052803.1 MGP_NODShiLtJ_G0025279.1 mouse_genomes_project 2 25010618 25012841 - Uap1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0052804.1 MGP_NODShiLtJ_G0025279.1 mouse_genomes_project 2 25010622 25013271 - Uap1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0052805.1 MGP_NODShiLtJ_G0025279.1 mouse_genomes_project 2 25012474 25013800 - Uap1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0052806.1 MGP_NODShiLtJ_G0025279.1 mouse_genomes_project 2 25013260 25014758 - Uap1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0059116.1 MGP_NODShiLtJ_G0026732.1 mouse_genomes_project 2 188208340 188233042 + MGP_NODShiLtJ_P0059116 Rnf114 protein_coding protein_coding MGP_NODShiLtJ_T0059117.1 MGP_NODShiLtJ_G0026732.1 mouse_genomes_project 2 188219008 188233049 + MGP_NODShiLtJ_P0059117 Rnf114 protein_coding protein_coding MGP_NODShiLtJ_T0059118.1 MGP_NODShiLtJ_G0026732.1 mouse_genomes_project 2 188219365 188233040 + MGP_NODShiLtJ_P0059118 Rnf114 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007116.1 MGP_NODShiLtJ_G0005828.1 mouse_genomes_project 2 32790090 32792822 + Gm13412 lincRNA lincRNA MGP_NODShiLtJ_T0052678.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685721 24694248 + MGP_NODShiLtJ_P0052678 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052679.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685739 24691929 + MGP_NODShiLtJ_P0052679 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052680.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685745 24694247 + MGP_NODShiLtJ_P0052680 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052681.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685750 24694248 + MGP_NODShiLtJ_P0052681 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052682.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685769 24688242 + Nsmf protein_coding retained_intron MGP_NODShiLtJ_T0052683.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685773 24686463 + Nsmf protein_coding retained_intron MGP_NODShiLtJ_T0052684.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685779 24694248 + MGP_NODShiLtJ_P0052684 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052685.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685779 24694248 + MGP_NODShiLtJ_P0052685 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052686.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685791 24690423 + MGP_NODShiLtJ_P0052686 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052687.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685801 24694248 + MGP_NODShiLtJ_P0052687 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052688.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685822 24694248 + MGP_NODShiLtJ_P0052688 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052689.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685834 24694248 + MGP_NODShiLtJ_P0052689 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052690.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24685834 24693995 + MGP_NODShiLtJ_P0052690 Nsmf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052691.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24687246 24688714 + Nsmf protein_coding retained_intron MGP_NODShiLtJ_T0052692.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24688513 24694248 + MGP_NODShiLtJ_P0052692 Nsmf protein_coding protein_coding MGP_NODShiLtJ_T0052693.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24688942 24691026 + Nsmf protein_coding retained_intron MGP_NODShiLtJ_T0052694.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24691502 24692474 + Nsmf protein_coding retained_intron MGP_NODShiLtJ_T0052695.1 MGP_NODShiLtJ_G0025256.1 mouse_genomes_project 2 24692195 24693076 + Nsmf protein_coding retained_intron MGP_NODShiLtJ_T0007303.1 MGP_NODShiLtJ_G0005979.1 mouse_genomes_project 2 170847460 170849860 - 4930556L07Rik lincRNA lincRNA MGP_NODShiLtJ_T0013764.1 MGP_NODShiLtJ_G0011872.1 mouse_genomes_project 2 202868076 202874986 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007270.1 MGP_NODShiLtJ_G0005952.1 mouse_genomes_project 2 149160280 149189508 + 4921508D12Rik lincRNA lincRNA MGP_NODShiLtJ_T0055488.1 MGP_NODShiLtJ_G0025823.1 mouse_genomes_project 2 96599761 96600700 - MGP_NODShiLtJ_P0055488 Olfr1105 protein_coding protein_coding MGP_NODShiLtJ_T0007161.1 MGP_NODShiLtJ_G0005866.1 mouse_genomes_project 2 74219730 74229930 - Gm26743 lincRNA lincRNA MGP_NODShiLtJ_T0056202.1 MGP_NODShiLtJ_G0026046.1 mouse_genomes_project 2 118126891 118151360 - MGP_NODShiLtJ_P0056202 Prrg4 protein_coding protein_coding MGP_NODShiLtJ_T0056203.1 MGP_NODShiLtJ_G0026046.1 mouse_genomes_project 2 118135853 118150977 - MGP_NODShiLtJ_P0056203 Prrg4 protein_coding protein_coding MGP_NODShiLtJ_T0101818.1 MGP_NODShiLtJ_G0039986.1 mouse_genomes_project 2 97006687 97009788 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013541.1 MGP_NODShiLtJ_G0011649.1 mouse_genomes_project 2 98768704 98775562 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058774.1 MGP_NODShiLtJ_G0026649.1 mouse_genomes_project 2 183961158 183984812 - MGP_NODShiLtJ_P0058774 Ada protein_coding protein_coding MGP_NODShiLtJ_T0058775.1 MGP_NODShiLtJ_G0026649.1 mouse_genomes_project 2 183964587 183965439 - Ada protein_coding processed_transcript MGP_NODShiLtJ_T0101830.1 MGP_NODShiLtJ_G0039998.1 mouse_genomes_project 2 99843967 99851292 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059641.1 MGP_NODShiLtJ_G0026850.1 mouse_genomes_project 2 203323304 203328889 - MGP_NODShiLtJ_P0059641 Rgs19 protein_coding protein_coding MGP_NODShiLtJ_T0059642.1 MGP_NODShiLtJ_G0026850.1 mouse_genomes_project 2 203323310 203324392 - MGP_NODShiLtJ_P0059642 Rgs19 protein_coding protein_coding MGP_NODShiLtJ_T0059643.1 MGP_NODShiLtJ_G0026850.1 mouse_genomes_project 2 203323313 203328812 - MGP_NODShiLtJ_P0059643 Rgs19 protein_coding protein_coding MGP_NODShiLtJ_T0059644.1 MGP_NODShiLtJ_G0026850.1 mouse_genomes_project 2 203323395 203326709 - MGP_NODShiLtJ_P0059644 Rgs19 protein_coding protein_coding MGP_NODShiLtJ_T0059645.1 MGP_NODShiLtJ_G0026850.1 mouse_genomes_project 2 203323398 203328822 - MGP_NODShiLtJ_P0059645 Rgs19 protein_coding protein_coding MGP_NODShiLtJ_T0059646.1 MGP_NODShiLtJ_G0026850.1 mouse_genomes_project 2 203324226 203328523 - Rgs19 protein_coding processed_transcript MGP_NODShiLtJ_T0059647.1 MGP_NODShiLtJ_G0026850.1 mouse_genomes_project 2 203324311 203328841 - Rgs19 protein_coding processed_transcript MGP_NODShiLtJ_T0059648.1 MGP_NODShiLtJ_G0026850.1 mouse_genomes_project 2 203324553 203328799 - Rgs19 protein_coding processed_transcript MGP_NODShiLtJ_T0007357.1 MGP_NODShiLtJ_G0006025.1 mouse_genomes_project 2 190317125 190323541 + Gm14250 lincRNA lincRNA MGP_NODShiLtJ_T0000997.1 MGP_NODShiLtJ_G0000923.1 mouse_genomes_project 2 3718631 3722064 + TEC TEC MGP_NODShiLtJ_T0059524.1 MGP_NODShiLtJ_G0026833.1 mouse_genomes_project 2 202822526 202870989 - MGP_NODShiLtJ_P0059524 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059525.1 MGP_NODShiLtJ_G0026833.1 mouse_genomes_project 2 202824869 202850780 - MGP_NODShiLtJ_P0059525 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059526.1 MGP_NODShiLtJ_G0026833.1 mouse_genomes_project 2 202825859 202827216 - protein_coding retained_intron MGP_NODShiLtJ_T0059527.1 MGP_NODShiLtJ_G0026833.1 mouse_genomes_project 2 202827002 202870453 - MGP_NODShiLtJ_P0059527 protein_coding protein_coding MGP_NODShiLtJ_T0059528.1 MGP_NODShiLtJ_G0026833.1 mouse_genomes_project 2 202827022 202863945 - MGP_NODShiLtJ_P0059528 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054985.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79018276 79316501 + MGP_NODShiLtJ_P0054985 Rapgef4 protein_coding protein_coding MGP_NODShiLtJ_T0054986.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79018283 79073676 + Rapgef4 protein_coding processed_transcript MGP_NODShiLtJ_T0054987.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79018295 79192056 + Rapgef4 protein_coding processed_transcript MGP_NODShiLtJ_T0054988.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79018323 79315403 + MGP_NODShiLtJ_P0054988 Rapgef4 protein_coding protein_coding MGP_NODShiLtJ_T0054989.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79018323 79316505 + MGP_NODShiLtJ_P0054989 Rapgef4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054990.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79099926 79316499 + MGP_NODShiLtJ_P0054990 Rapgef4 protein_coding protein_coding MGP_NODShiLtJ_T0054991.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79100302 79192231 + Rapgef4 protein_coding processed_transcript MGP_NODShiLtJ_T0054992.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79191468 79252692 + Rapgef4 protein_coding processed_transcript MGP_NODShiLtJ_T0054993.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79191485 79217313 + Rapgef4 protein_coding processed_transcript MGP_NODShiLtJ_T0054994.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79235575 79316499 + Rapgef4 protein_coding processed_transcript MGP_NODShiLtJ_T0054995.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79255238 79264827 + Rapgef4 protein_coding processed_transcript MGP_NODShiLtJ_T0054996.1 MGP_NODShiLtJ_G0025665.1 mouse_genomes_project 2 79301702 79315682 + Rapgef4 protein_coding processed_transcript MGP_NODShiLtJ_T0058216.1 MGP_NODShiLtJ_G0026549.1 mouse_genomes_project 2 174613367 174619098 + Itch protein_coding retained_intron MGP_NODShiLtJ_T0058217.1 MGP_NODShiLtJ_G0026549.1 mouse_genomes_project 2 174613367 174660415 + Itch protein_coding retained_intron MGP_NODShiLtJ_T0058218.1 MGP_NODShiLtJ_G0026549.1 mouse_genomes_project 2 174613367 174717762 + MGP_NODShiLtJ_P0058218 Itch protein_coding protein_coding MGP_NODShiLtJ_T0058219.1 MGP_NODShiLtJ_G0026549.1 mouse_genomes_project 2 174613382 174663835 + Itch protein_coding retained_intron MGP_NODShiLtJ_T0058220.1 MGP_NODShiLtJ_G0026549.1 mouse_genomes_project 2 174613389 174690495 + Itch protein_coding processed_transcript MGP_NODShiLtJ_T0058221.1 MGP_NODShiLtJ_G0026549.1 mouse_genomes_project 2 174613417 174717760 + MGP_NODShiLtJ_P0058221 Itch protein_coding protein_coding MGP_NODShiLtJ_T0058222.1 MGP_NODShiLtJ_G0026549.1 mouse_genomes_project 2 174613419 174704105 + Itch protein_coding retained_intron MGP_NODShiLtJ_T0052201.1 MGP_NODShiLtJ_G0025179.1 mouse_genomes_project 2 8206015 8277487 + MGP_NODShiLtJ_P0052201 Sfmbt2 protein_coding protein_coding MGP_NODShiLtJ_T0052202.1 MGP_NODShiLtJ_G0025179.1 mouse_genomes_project 2 8206016 8277487 + MGP_NODShiLtJ_P0052202 Sfmbt2 protein_coding protein_coding MGP_NODShiLtJ_T0052203.1 MGP_NODShiLtJ_G0025179.1 mouse_genomes_project 2 8206023 8241186 + Sfmbt2 protein_coding processed_transcript MGP_NODShiLtJ_T0052204.1 MGP_NODShiLtJ_G0025179.1 mouse_genomes_project 2 8208781 8277487 + MGP_NODShiLtJ_P0052204 Sfmbt2 protein_coding protein_coding MGP_NODShiLtJ_T0052205.1 MGP_NODShiLtJ_G0025179.1 mouse_genomes_project 2 8208781 8449875 + MGP_NODShiLtJ_P0052205 Sfmbt2 protein_coding protein_coding MGP_NODShiLtJ_T0052206.1 MGP_NODShiLtJ_G0025179.1 mouse_genomes_project 2 8208793 8229837 + Sfmbt2 protein_coding processed_transcript MGP_NODShiLtJ_T0052207.1 MGP_NODShiLtJ_G0025179.1 mouse_genomes_project 2 8208795 8449887 + MGP_NODShiLtJ_P0052207 Sfmbt2 protein_coding protein_coding MGP_NODShiLtJ_T0055624.1 MGP_NODShiLtJ_G0025939.1 mouse_genomes_project 2 100523315 100524331 + MGP_NODShiLtJ_P0055624 Olfr1257 protein_coding protein_coding MGP_NODShiLtJ_T0055798.1 MGP_NODShiLtJ_G0025973.1 mouse_genomes_project 2 102146982 102348747 - MGP_NODShiLtJ_P0055798 1110051M20Rik protein_coding protein_coding MGP_NODShiLtJ_T0055799.1 MGP_NODShiLtJ_G0025973.1 mouse_genomes_project 2 102147396 102348785 - MGP_NODShiLtJ_P0055799 1110051M20Rik protein_coding protein_coding MGP_NODShiLtJ_T0055806.1 MGP_NODShiLtJ_G0025973.1 mouse_genomes_project 2 102164030 102165430 - 1110051M20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0055807.1 MGP_NODShiLtJ_G0025973.1 mouse_genomes_project 2 102187268 102348748 - 1110051M20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0055808.1 MGP_NODShiLtJ_G0025973.1 mouse_genomes_project 2 102274216 102348774 - 1110051M20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0055809.1 MGP_NODShiLtJ_G0025973.1 mouse_genomes_project 2 102322877 102348742 - 1110051M20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0055810.1 MGP_NODShiLtJ_G0025973.1 mouse_genomes_project 2 102322926 102348809 - 1110051M20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0057452.1 MGP_NODShiLtJ_G0026344.1 mouse_genomes_project 2 147851263 147855385 + Ap5s1 protein_coding processed_transcript MGP_NODShiLtJ_T0057453.1 MGP_NODShiLtJ_G0026344.1 mouse_genomes_project 2 147851271 147857709 + MGP_NODShiLtJ_P0057453 Ap5s1 protein_coding protein_coding MGP_NODShiLtJ_T0057454.1 MGP_NODShiLtJ_G0026344.1 mouse_genomes_project 2 147854307 147857975 + Ap5s1 protein_coding processed_transcript MGP_NODShiLtJ_T0057455.1 MGP_NODShiLtJ_G0026344.1 mouse_genomes_project 2 147854334 147857567 + Ap5s1 protein_coding processed_transcript MGP_NODShiLtJ_T0057456.1 MGP_NODShiLtJ_G0026344.1 mouse_genomes_project 2 147854361 147858484 + MGP_NODShiLtJ_P0057456 Ap5s1 protein_coding protein_coding MGP_NODShiLtJ_T0057457.1 MGP_NODShiLtJ_G0026344.1 mouse_genomes_project 2 147854377 147858487 + MGP_NODShiLtJ_P0057457 Ap5s1 protein_coding protein_coding MGP_NODShiLtJ_T0057458.1 MGP_NODShiLtJ_G0026344.1 mouse_genomes_project 2 147854377 147858487 + MGP_NODShiLtJ_P0057458 Ap5s1 protein_coding protein_coding MGP_NODShiLtJ_T0057459.1 MGP_NODShiLtJ_G0026344.1 mouse_genomes_project 2 147854541 147857837 + MGP_NODShiLtJ_P0057459 Ap5s1 protein_coding protein_coding MGP_NODShiLtJ_T0053048.1 MGP_NODShiLtJ_G0025326.1 mouse_genomes_project 2 26132895 26135863 - MGP_NODShiLtJ_P0053048 Inpp5e protein_coding protein_coding MGP_NODShiLtJ_T0053049.1 MGP_NODShiLtJ_G0025326.1 mouse_genomes_project 2 26133433 26146599 - Inpp5e protein_coding processed_transcript MGP_NODShiLtJ_T0053050.1 MGP_NODShiLtJ_G0025326.1 mouse_genomes_project 2 26133676 26146618 - Inpp5e protein_coding processed_transcript MGP_NODShiLtJ_T0053051.1 MGP_NODShiLtJ_G0025326.1 mouse_genomes_project 2 26134218 26146002 - MGP_NODShiLtJ_P0053051 Inpp5e protein_coding protein_coding MGP_NODShiLtJ_T0053052.1 MGP_NODShiLtJ_G0025326.1 mouse_genomes_project 2 26135651 26136868 - Inpp5e protein_coding processed_transcript MGP_NODShiLtJ_T0053053.1 MGP_NODShiLtJ_G0025326.1 mouse_genomes_project 2 26135804 26138598 - MGP_NODShiLtJ_P0053053 Inpp5e protein_coding protein_coding MGP_NODShiLtJ_T0011388.1 MGP_NODShiLtJ_G0009521.1 mouse_genomes_project 2 47653641 47653718 + Gm27645 misc_RNA misc_RNA MGP_NODShiLtJ_T0010244.1 MGP_NODShiLtJ_G0008377.1 mouse_genomes_project 2 8308232 8308330 + Mir669l miRNA miRNA MGP_NODShiLtJ_T0011397.1 MGP_NODShiLtJ_G0009530.1 mouse_genomes_project 2 118468977 118469271 - Gm27538 misc_RNA misc_RNA MGP_NODShiLtJ_T0013312.1 MGP_NODShiLtJ_G0011420.1 mouse_genomes_project 2 12931989 12932324 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099099.1 MGP_NODShiLtJ_G0037493.1 mouse_genomes_project 2 28508204 28508308 + Gm22675 snRNA snRNA MGP_NODShiLtJ_T0011411.1 MGP_NODShiLtJ_G0009544.1 mouse_genomes_project 2 178266573 178266659 + Gm24379 misc_RNA misc_RNA MGP_NODShiLtJ_T0010235.1 MGP_NODShiLtJ_G0008368.1 mouse_genomes_project 2 8305021 8305129 + Gm22677 miRNA miRNA MGP_NODShiLtJ_T0055008.1 MGP_NODShiLtJ_G0025668.1 mouse_genomes_project 2 80047733 80099277 - MGP_NODShiLtJ_P0055008 Sp3 protein_coding protein_coding MGP_NODShiLtJ_T0055009.1 MGP_NODShiLtJ_G0025668.1 mouse_genomes_project 2 80048382 80098287 - Sp3 protein_coding processed_transcript MGP_NODShiLtJ_T0055010.1 MGP_NODShiLtJ_G0025668.1 mouse_genomes_project 2 80050291 80053096 - Sp3 protein_coding processed_transcript MGP_NODShiLtJ_T0055011.1 MGP_NODShiLtJ_G0025668.1 mouse_genomes_project 2 80061102 80087617 - Sp3 protein_coding processed_transcript MGP_NODShiLtJ_T0058655.1 MGP_NODShiLtJ_G0026623.1 mouse_genomes_project 2 180292733 180296072 - MGP_NODShiLtJ_P0058655 Mafb protein_coding protein_coding MGP_NODShiLtJ_T0101840.1 MGP_NODShiLtJ_G0040008.1 mouse_genomes_project 2 137857397 137859751 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007196.1 MGP_NODShiLtJ_G0005894.1 mouse_genomes_project 2 93272538 93301303 - Gm13710 lincRNA lincRNA MGP_NODShiLtJ_T0013625.1 MGP_NODShiLtJ_G0011733.1 mouse_genomes_project 2 137113434 137113667 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055569.1 MGP_NODShiLtJ_G0025892.1 mouse_genomes_project 2 98999872 99003268 - MGP_NODShiLtJ_P0055569 Olfr1199 protein_coding protein_coding MGP_NODShiLtJ_T0059567.1 MGP_NODShiLtJ_G0026838.1 mouse_genomes_project 2 202967128 202970166 + MGP_NODShiLtJ_P0059567 Lime1 protein_coding protein_coding MGP_NODShiLtJ_T0059568.1 MGP_NODShiLtJ_G0026838.1 mouse_genomes_project 2 202968285 202970679 + MGP_NODShiLtJ_P0059568 Lime1 protein_coding protein_coding MGP_NODShiLtJ_T0059569.1 MGP_NODShiLtJ_G0026838.1 mouse_genomes_project 2 202968408 202970605 + Lime1 protein_coding retained_intron MGP_NODShiLtJ_T0059570.1 MGP_NODShiLtJ_G0026838.1 mouse_genomes_project 2 202968408 202970005 + Lime1 protein_coding retained_intron MGP_NODShiLtJ_T0059571.1 MGP_NODShiLtJ_G0026838.1 mouse_genomes_project 2 202968408 202970674 + MGP_NODShiLtJ_P0059571 Lime1 protein_coding protein_coding MGP_NODShiLtJ_T0059572.1 MGP_NODShiLtJ_G0026838.1 mouse_genomes_project 2 202968922 202970679 + MGP_NODShiLtJ_P0059572 Lime1 protein_coding protein_coding MGP_NODShiLtJ_T0059573.1 MGP_NODShiLtJ_G0026838.1 mouse_genomes_project 2 202969536 202970364 + Lime1 protein_coding retained_intron MGP_NODShiLtJ_T0055626.1 MGP_NODShiLtJ_G0025941.1 mouse_genomes_project 2 100595051 100596579 - MGP_NODShiLtJ_P0055626 protein_coding protein_coding MGP_NODShiLtJ_T0054298.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39902101 39954843 - MGP_NODShiLtJ_P0054298 Golga1 protein_coding protein_coding MGP_NODShiLtJ_T0054299.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39902207 39954790 - MGP_NODShiLtJ_P0054299 Golga1 protein_coding protein_coding MGP_NODShiLtJ_T0054300.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39902449 39942317 - MGP_NODShiLtJ_P0054300 Golga1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054301.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39902725 39904353 - Golga1 protein_coding processed_transcript MGP_NODShiLtJ_T0054302.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39903599 39904513 - Golga1 protein_coding retained_intron MGP_NODShiLtJ_T0054303.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39903599 39954790 - MGP_NODShiLtJ_P0054303 Golga1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054304.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39903759 39905508 - MGP_NODShiLtJ_P0054304 Golga1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054305.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39904100 39905188 - Golga1 protein_coding retained_intron MGP_NODShiLtJ_T0054306.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39908675 39954790 - Golga1 protein_coding retained_intron MGP_NODShiLtJ_T0054307.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39930605 39945425 - MGP_NODShiLtJ_P0054307 Golga1 protein_coding protein_coding MGP_NODShiLtJ_T0054308.1 MGP_NODShiLtJ_G0025547.1 mouse_genomes_project 2 39936375 39954787 - Golga1 protein_coding retained_intron MGP_NODShiLtJ_T0057104.1 MGP_NODShiLtJ_G0026260.1 mouse_genomes_project 2 143050863 143105636 + Usp8 protein_coding processed_transcript MGP_NODShiLtJ_T0057105.1 MGP_NODShiLtJ_G0026260.1 mouse_genomes_project 2 143050878 143105685 + MGP_NODShiLtJ_P0057105 Usp8 protein_coding protein_coding MGP_NODShiLtJ_T0057106.1 MGP_NODShiLtJ_G0026260.1 mouse_genomes_project 2 143050895 143105678 + MGP_NODShiLtJ_P0057106 Usp8 protein_coding protein_coding MGP_NODShiLtJ_T0013527.1 MGP_NODShiLtJ_G0011635.1 mouse_genomes_project 2 96856063 96857525 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056035.1 MGP_NODShiLtJ_G0026012.1 mouse_genomes_project 2 114601569 114618488 - MGP_NODShiLtJ_P0056035 B230118H07Rik protein_coding protein_coding MGP_NODShiLtJ_T0056036.1 MGP_NODShiLtJ_G0026012.1 mouse_genomes_project 2 114601634 114673511 - MGP_NODShiLtJ_P0056036 B230118H07Rik protein_coding protein_coding MGP_NODShiLtJ_T0056037.1 MGP_NODShiLtJ_G0026012.1 mouse_genomes_project 2 114601670 114673446 - MGP_NODShiLtJ_P0056037 B230118H07Rik protein_coding protein_coding MGP_NODShiLtJ_T0056038.1 MGP_NODShiLtJ_G0026012.1 mouse_genomes_project 2 114601674 114627279 - B230118H07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0056039.1 MGP_NODShiLtJ_G0026012.1 mouse_genomes_project 2 114618397 114672806 - MGP_NODShiLtJ_P0056039 B230118H07Rik protein_coding protein_coding MGP_NODShiLtJ_T0056040.1 MGP_NODShiLtJ_G0026012.1 mouse_genomes_project 2 114653086 114673513 - B230118H07Rik protein_coding retained_intron MGP_NODShiLtJ_T0056041.1 MGP_NODShiLtJ_G0026012.1 mouse_genomes_project 2 114653612 114664793 - B230118H07Rik protein_coding retained_intron MGP_NODShiLtJ_T0056042.1 MGP_NODShiLtJ_G0026012.1 mouse_genomes_project 2 114654122 114694055 - B230118H07Rik protein_coding retained_intron MGP_NODShiLtJ_T0007165.1 MGP_NODShiLtJ_G0005870.1 mouse_genomes_project 2 78990306 78991636 + Gm13746 lincRNA lincRNA MGP_NODShiLtJ_T0054200.1 MGP_NODShiLtJ_G0025522.1 mouse_genomes_project 2 37658591 37659584 - MGP_NODShiLtJ_P0054200 Olfr358 protein_coding protein_coding MGP_NODShiLtJ_T0001045.1 MGP_NODShiLtJ_G0000971.1 mouse_genomes_project 2 36772282 36774290 - TEC TEC MGP_NODShiLtJ_T0013756.1 MGP_NODShiLtJ_G0011864.1 mouse_genomes_project 2 195328683 195328893 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055388.1 MGP_NODShiLtJ_G0025751.1 mouse_genomes_project 2 93766420 93767670 + MGP_NODShiLtJ_P0055388 Slc43a3 protein_coding protein_coding MGP_NODShiLtJ_T0055389.1 MGP_NODShiLtJ_G0025751.1 mouse_genomes_project 2 93766458 93768167 + MGP_NODShiLtJ_P0055389 Slc43a3 protein_coding protein_coding MGP_NODShiLtJ_T0055390.1 MGP_NODShiLtJ_G0025751.1 mouse_genomes_project 2 93766487 93774430 + MGP_NODShiLtJ_P0055390 Slc43a3 protein_coding protein_coding MGP_NODShiLtJ_T0055391.1 MGP_NODShiLtJ_G0025751.1 mouse_genomes_project 2 93766505 93789411 + MGP_NODShiLtJ_P0055391 Slc43a3 protein_coding protein_coding MGP_NODShiLtJ_T0055392.1 MGP_NODShiLtJ_G0025751.1 mouse_genomes_project 2 93766530 93767517 + Slc43a3 protein_coding processed_transcript MGP_NODShiLtJ_T0055393.1 MGP_NODShiLtJ_G0025751.1 mouse_genomes_project 2 93766727 93777978 + Slc43a3 protein_coding retained_intron MGP_NODShiLtJ_T0054614.1 MGP_NODShiLtJ_G0025598.1 mouse_genomes_project 2 65739146 65878939 - MGP_NODShiLtJ_P0054614 Pla2r1 protein_coding protein_coding MGP_NODShiLtJ_T0054615.1 MGP_NODShiLtJ_G0025598.1 mouse_genomes_project 2 65741628 65746725 - Pla2r1 protein_coding processed_transcript MGP_NODShiLtJ_T0054616.1 MGP_NODShiLtJ_G0025598.1 mouse_genomes_project 2 65763135 65765670 - Pla2r1 protein_coding retained_intron MGP_NODShiLtJ_T0054617.1 MGP_NODShiLtJ_G0025598.1 mouse_genomes_project 2 65773349 65878939 - Pla2r1 protein_coding retained_intron MGP_NODShiLtJ_T0054618.1 MGP_NODShiLtJ_G0025598.1 mouse_genomes_project 2 65774206 65777469 - Pla2r1 protein_coding retained_intron MGP_NODShiLtJ_T0054619.1 MGP_NODShiLtJ_G0025598.1 mouse_genomes_project 2 65857173 65878939 - Pla2r1 protein_coding retained_intron MGP_NODShiLtJ_T0013479.1 MGP_NODShiLtJ_G0011587.1 mouse_genomes_project 2 79636911 79637253 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059683.1 MGP_NODShiLtJ_G0026857.1 mouse_genomes_project 2 203689895 203696473 + MGP_NODShiLtJ_P0059683 Gm14496 protein_coding protein_coding MGP_NODShiLtJ_T0054286.1 MGP_NODShiLtJ_G0025543.1 mouse_genomes_project 2 39807634 39841282 + MGP_NODShiLtJ_P0054286 Olfml2a protein_coding protein_coding MGP_NODShiLtJ_T0001049.1 MGP_NODShiLtJ_G0000975.1 mouse_genomes_project 2 39337868 39342725 + TEC TEC MGP_NODShiLtJ_T0003881.1 MGP_NODShiLtJ_G0003461.1 mouse_genomes_project 2 28457060 28489654 + antisense antisense MGP_NODShiLtJ_T0003882.1 MGP_NODShiLtJ_G0003461.1 mouse_genomes_project 2 28457391 28489936 + antisense antisense MGP_NODShiLtJ_T0052197.1 MGP_NODShiLtJ_G0025177.1 mouse_genomes_project 2 7929882 7965590 - MGP_NODShiLtJ_P0052197 Itih2 protein_coding protein_coding MGP_NODShiLtJ_T0052198.1 MGP_NODShiLtJ_G0025177.1 mouse_genomes_project 2 7944149 7966002 - MGP_NODShiLtJ_P0052198 Itih2 protein_coding protein_coding MGP_NODShiLtJ_T0052199.1 MGP_NODShiLtJ_G0025177.1 mouse_genomes_project 2 7961207 7966323 - MGP_NODShiLtJ_P0052199 Itih2 protein_coding protein_coding MGP_NODShiLtJ_T0010351.1 MGP_NODShiLtJ_G0008484.1 mouse_genomes_project 2 143415410 143415535 + Gm24081 miRNA miRNA MGP_NODShiLtJ_T0056326.1 MGP_NODShiLtJ_G0026077.1 mouse_genomes_project 2 125847027 125848173 + MGP_NODShiLtJ_P0056326 protein_coding protein_coding MGP_NODShiLtJ_T0052785.1 MGP_NODShiLtJ_G0025277.1 mouse_genomes_project 2 24978238 24991018 + MGP_NODShiLtJ_P0052785 Man1b1 protein_coding protein_coding MGP_NODShiLtJ_T0052786.1 MGP_NODShiLtJ_G0025277.1 mouse_genomes_project 2 24978629 24999742 + MGP_NODShiLtJ_P0052786 Man1b1 protein_coding protein_coding MGP_NODShiLtJ_T0052787.1 MGP_NODShiLtJ_G0025277.1 mouse_genomes_project 2 24978662 24992286 + Man1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0052788.1 MGP_NODShiLtJ_G0025277.1 mouse_genomes_project 2 24978673 24984069 + Man1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0052789.1 MGP_NODShiLtJ_G0025277.1 mouse_genomes_project 2 24984012 24993000 + Man1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0052790.1 MGP_NODShiLtJ_G0025277.1 mouse_genomes_project 2 24992734 24993438 + Man1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0013706.1 MGP_NODShiLtJ_G0011814.1 mouse_genomes_project 2 172656818 172657100 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007157.1 MGP_NODShiLtJ_G0005862.1 mouse_genomes_project 2 70469942 70482509 - Gm13575 lincRNA lincRNA MGP_NODShiLtJ_T0059626.1 MGP_NODShiLtJ_G0026846.1 mouse_genomes_project 2 203211837 203240959 + MGP_NODShiLtJ_P0059626 Prpf6 protein_coding protein_coding MGP_NODShiLtJ_T0059630.1 MGP_NODShiLtJ_G0026846.1 mouse_genomes_project 2 203221288 203272411 + Prpf6 protein_coding retained_intron MGP_NODShiLtJ_T0059631.1 MGP_NODShiLtJ_G0026846.1 mouse_genomes_project 2 203221376 203288385 + MGP_NODShiLtJ_P0059631 Prpf6 protein_coding protein_coding MGP_NODShiLtJ_T0013595.1 MGP_NODShiLtJ_G0011703.1 mouse_genomes_project 2 122410764 122411695 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058143.1 MGP_NODShiLtJ_G0026531.1 mouse_genomes_project 2 173625827 173640726 + protein_coding retained_intron MGP_NODShiLtJ_T0058144.1 MGP_NODShiLtJ_G0026531.1 mouse_genomes_project 2 173625827 173700124 + MGP_NODShiLtJ_P0058144 protein_coding protein_coding MGP_NODShiLtJ_T0058145.1 MGP_NODShiLtJ_G0026531.1 mouse_genomes_project 2 173640277 173700124 + protein_coding processed_transcript MGP_NODShiLtJ_T0058888.1 MGP_NODShiLtJ_G0026693.1 mouse_genomes_project 2 185162381 185180940 + MGP_NODShiLtJ_P0058888 Zswim3 protein_coding protein_coding MGP_NODShiLtJ_T0055672.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101679510 101700222 + MGP_NODShiLtJ_P0055672 Mtch2 protein_coding protein_coding MGP_NODShiLtJ_T0055673.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101679533 101698800 + MGP_NODShiLtJ_P0055673 Mtch2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055674.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101679545 101680670 + Mtch2 protein_coding processed_transcript MGP_NODShiLtJ_T0055675.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101679586 101700052 + MGP_NODShiLtJ_P0055675 Mtch2 protein_coding protein_coding MGP_NODShiLtJ_T0055676.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101679608 101685032 + Mtch2 protein_coding retained_intron MGP_NODShiLtJ_T0055677.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101679628 101700052 + MGP_NODShiLtJ_P0055677 Mtch2 protein_coding protein_coding MGP_NODShiLtJ_T0055678.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101679642 101698803 + Mtch2 protein_coding processed_transcript MGP_NODShiLtJ_T0055679.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101685602 101689159 + Mtch2 protein_coding retained_intron MGP_NODShiLtJ_T0055680.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101686237 101690276 + Mtch2 protein_coding retained_intron MGP_NODShiLtJ_T0055681.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101694651 101698883 + Mtch2 protein_coding retained_intron MGP_NODShiLtJ_T0055682.1 MGP_NODShiLtJ_G0025957.1 mouse_genomes_project 2 101696870 101698800 + Mtch2 protein_coding retained_intron MGP_NODShiLtJ_T0052041.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1037011 1196293 + Frmd4a protein_coding processed_transcript MGP_NODShiLtJ_T0052042.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1037028 1041199 + Frmd4a protein_coding retained_intron MGP_NODShiLtJ_T0052043.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1037038 1666152 + MGP_NODShiLtJ_P0052043 Frmd4a protein_coding protein_coding MGP_NODShiLtJ_T0052044.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1179299 1200712 + Frmd4a protein_coding processed_transcript MGP_NODShiLtJ_T0052045.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1179308 1666053 + MGP_NODShiLtJ_P0052045 Frmd4a protein_coding protein_coding MGP_NODShiLtJ_T0052046.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1333903 1623926 + MGP_NODShiLtJ_P0052046 Frmd4a protein_coding protein_coding MGP_NODShiLtJ_T0052047.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1334270 1589331 + Frmd4a protein_coding retained_intron MGP_NODShiLtJ_T0052048.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1334388 1611762 + MGP_NODShiLtJ_P0052048 Frmd4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052049.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1370595 1646803 + MGP_NODShiLtJ_P0052049 Frmd4a protein_coding protein_coding MGP_NODShiLtJ_T0052050.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1430071 1579198 + MGP_NODShiLtJ_P0052050 Frmd4a protein_coding protein_coding MGP_NODShiLtJ_T0052051.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1430073 1477916 + Frmd4a protein_coding retained_intron MGP_NODShiLtJ_T0052052.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1443286 1475768 + Frmd4a protein_coding retained_intron MGP_NODShiLtJ_T0052053.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1443320 1588169 + Frmd4a protein_coding retained_intron MGP_NODShiLtJ_T0052054.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1475093 1660181 + MGP_NODShiLtJ_P0052054 Frmd4a protein_coding protein_coding MGP_NODShiLtJ_T0052055.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1519594 1544510 + Frmd4a protein_coding retained_intron MGP_NODShiLtJ_T0052056.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1611255 1650152 + Frmd4a protein_coding retained_intron MGP_NODShiLtJ_T0052057.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1611276 1639673 + Frmd4a protein_coding retained_intron MGP_NODShiLtJ_T0052058.1 MGP_NODShiLtJ_G0025151.1 mouse_genomes_project 2 1617673 1646839 + MGP_NODShiLtJ_P0052058 Frmd4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013734.1 MGP_NODShiLtJ_G0011842.1 mouse_genomes_project 2 181328309 181328759 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055824.1 MGP_NODShiLtJ_G0025976.1 mouse_genomes_project 2 102549076 102560162 - MGP_NODShiLtJ_P0055824 F2 protein_coding protein_coding MGP_NODShiLtJ_T0055825.1 MGP_NODShiLtJ_G0025976.1 mouse_genomes_project 2 102549085 102560155 - MGP_NODShiLtJ_P0055825 F2 protein_coding protein_coding MGP_NODShiLtJ_T0055826.1 MGP_NODShiLtJ_G0025976.1 mouse_genomes_project 2 102554922 102560143 - F2 protein_coding processed_transcript MGP_NODShiLtJ_T0058804.1 MGP_NODShiLtJ_G0026662.1 mouse_genomes_project 2 184509183 184511737 - MGP_NODShiLtJ_P0058804 Svs2 protein_coding protein_coding MGP_NODShiLtJ_T0058805.1 MGP_NODShiLtJ_G0026662.1 mouse_genomes_project 2 184509782 184511533 - MGP_NODShiLtJ_P0058805 Svs2 protein_coding protein_coding MGP_NODShiLtJ_T0053137.1 MGP_NODShiLtJ_G0025340.1 mouse_genomes_project 2 26684393 26700062 - MGP_NODShiLtJ_P0053137 Surf4 protein_coding protein_coding MGP_NODShiLtJ_T0053138.1 MGP_NODShiLtJ_G0025340.1 mouse_genomes_project 2 26686315 26698288 - MGP_NODShiLtJ_P0053138 Surf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053139.1 MGP_NODShiLtJ_G0025340.1 mouse_genomes_project 2 26689874 26699915 - MGP_NODShiLtJ_P0053139 Surf4 protein_coding protein_coding MGP_NODShiLtJ_T0099141.1 MGP_NODShiLtJ_G0037535.1 mouse_genomes_project 2 172367725 172367828 + Gm25643 snRNA snRNA MGP_NODShiLtJ_T0054447.1 MGP_NODShiLtJ_G0025567.1 mouse_genomes_project 2 55916262 55934868 + MGP_NODShiLtJ_P0054447 Tnfaip6 protein_coding protein_coding MGP_NODShiLtJ_T0007113.1 MGP_NODShiLtJ_G0005826.1 mouse_genomes_project 2 30693057 30754899 + 9330198N18Rik lincRNA lincRNA MGP_NODShiLtJ_T0007379.1 MGP_NODShiLtJ_G0006045.1 mouse_genomes_project 2 202390119 202403546 + Gm14344 lincRNA lincRNA MGP_NODShiLtJ_T0013413.1 MGP_NODShiLtJ_G0011521.1 mouse_genomes_project 2 54240646 54241510 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100425.1 MGP_NODShiLtJ_G0038819.1 mouse_genomes_project 2 187706632 187706725 + Gm25878 snoRNA snoRNA MGP_NODShiLtJ_T0059671.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203481188 203503704 + MGP_NODShiLtJ_P0059671 Pcmtd2 protein_coding protein_coding MGP_NODShiLtJ_T0059672.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203481247 203503689 + MGP_NODShiLtJ_P0059672 Pcmtd2 protein_coding protein_coding MGP_NODShiLtJ_T0059673.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203484194 203491312 + MGP_NODShiLtJ_P0059673 Pcmtd2 protein_coding protein_coding MGP_NODShiLtJ_T0059674.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203485815 203491366 + Pcmtd2 protein_coding retained_intron MGP_NODShiLtJ_T0059675.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203489154 203500734 + MGP_NODShiLtJ_P0059675 Pcmtd2 protein_coding protein_coding MGP_NODShiLtJ_T0059676.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203496353 203500998 + Pcmtd2 protein_coding processed_transcript MGP_NODShiLtJ_T0059677.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203496361 203500873 + Pcmtd2 protein_coding processed_transcript MGP_NODShiLtJ_T0059678.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203496395 203500651 + Pcmtd2 protein_coding processed_transcript MGP_NODShiLtJ_T0059679.1 MGP_NODShiLtJ_G0026854.1 mouse_genomes_project 2 203496958 203500901 + Pcmtd2 protein_coding retained_intron MGP_NODShiLtJ_T0055434.1 MGP_NODShiLtJ_G0025770.1 mouse_genomes_project 2 94767814 94769226 + MGP_NODShiLtJ_P0055434 Olfr1014 protein_coding protein_coding MGP_NODShiLtJ_T0055143.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84142993 84436229 - MGP_NODShiLtJ_P0055143 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055144.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84142997 84436321 - MGP_NODShiLtJ_P0055144 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055145.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84144045 84433941 - MGP_NODShiLtJ_P0055145 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055146.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84144045 84436287 - MGP_NODShiLtJ_P0055146 Ttn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055147.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84257226 84343609 - MGP_NODShiLtJ_P0055147 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055148.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84257260 84321198 - MGP_NODShiLtJ_P0055148 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055149.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84257261 84321198 - MGP_NODShiLtJ_P0055149 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055150.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84257261 84321198 - MGP_NODShiLtJ_P0055150 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055151.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84257261 84321198 - MGP_NODShiLtJ_P0055151 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055152.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84257279 84321198 - MGP_NODShiLtJ_P0055152 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055153.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84267740 84273154 - MGP_NODShiLtJ_P0055153 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055154.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84269138 84290076 - MGP_NODShiLtJ_P0055154 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055155.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84279817 84280629 - MGP_NODShiLtJ_P0055155 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055156.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84284895 84285745 - MGP_NODShiLtJ_P0055156 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055157.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84284895 84287824 - MGP_NODShiLtJ_P0055157 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055158.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84293152 84298619 - MGP_NODShiLtJ_P0055158 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055159.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84300747 84324306 - MGP_NODShiLtJ_P0055159 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055160.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84342434 84343191 - Ttn protein_coding processed_transcript MGP_NODShiLtJ_T0055161.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84370407 84436229 - MGP_NODShiLtJ_P0055161 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055162.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84393254 84395855 - Ttn protein_coding retained_intron MGP_NODShiLtJ_T0055163.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84415401 84436321 - Ttn protein_coding retained_intron MGP_NODShiLtJ_T0055164.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84416207 84436321 - MGP_NODShiLtJ_P0055164 Ttn protein_coding protein_coding MGP_NODShiLtJ_T0055165.1 MGP_NODShiLtJ_G0025707.1 mouse_genomes_project 2 84424206 84436321 - Ttn protein_coding retained_intron MGP_NODShiLtJ_T0059530.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202904162 202941346 + MGP_NODShiLtJ_P0059530 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059531.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202904176 202932188 + Rtel1 protein_coding retained_intron MGP_NODShiLtJ_T0059532.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202904185 202941308 + Rtel1 protein_coding retained_intron MGP_NODShiLtJ_T0059533.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202904185 202941346 + MGP_NODShiLtJ_P0059533 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059534.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202904208 202941346 + MGP_NODShiLtJ_P0059534 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059535.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202904208 202941346 + MGP_NODShiLtJ_P0059535 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059536.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202904208 202941308 + MGP_NODShiLtJ_P0059536 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059537.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202904386 202908118 + MGP_NODShiLtJ_P0059537 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059538.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202913040 202941346 + MGP_NODShiLtJ_P0059538 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059539.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202920007 202931778 + MGP_NODShiLtJ_P0059539 Rtel1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059540.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202924215 202931761 + Rtel1 protein_coding retained_intron MGP_NODShiLtJ_T0059541.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202934184 202934685 + Rtel1 protein_coding retained_intron MGP_NODShiLtJ_T0059542.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202934747 202936793 + Rtel1 protein_coding retained_intron MGP_NODShiLtJ_T0059543.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202934857 202935885 + Rtel1 protein_coding retained_intron MGP_NODShiLtJ_T0059544.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202936811 202940282 + Rtel1 protein_coding retained_intron MGP_NODShiLtJ_T0059545.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202939129 202940543 + Rtel1 protein_coding processed_transcript MGP_NODShiLtJ_T0059546.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202939932 202940747 + Rtel1 protein_coding retained_intron MGP_NODShiLtJ_T0059547.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202940423 202941345 + Rtel1 protein_coding processed_transcript MGP_NODShiLtJ_T0059548.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202940494 202941344 + MGP_NODShiLtJ_P0059548 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059549.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202940699 202941346 + MGP_NODShiLtJ_P0059549 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0059550.1 MGP_NODShiLtJ_G0026835.1 mouse_genomes_project 2 202940699 202941346 + MGP_NODShiLtJ_P0059550 Rtel1 protein_coding protein_coding MGP_NODShiLtJ_T0058662.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180692943 180724145 + MGP_NODShiLtJ_P0058662 Plcg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058663.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180692953 180739242 + MGP_NODShiLtJ_P0058663 Plcg1 protein_coding protein_coding MGP_NODShiLtJ_T0058664.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180693342 180709531 + MGP_NODShiLtJ_P0058664 Plcg1 protein_coding protein_coding MGP_NODShiLtJ_T0058665.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180693376 180724929 + MGP_NODShiLtJ_P0058665 Plcg1 protein_coding protein_coding MGP_NODShiLtJ_T0058666.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180702629 180724149 + Plcg1 protein_coding processed_transcript MGP_NODShiLtJ_T0058668.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180714129 180723798 + Plcg1 protein_coding retained_intron MGP_NODShiLtJ_T0058669.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180714194 180720550 + Plcg1 protein_coding retained_intron MGP_NODShiLtJ_T0058670.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180715709 180716507 + Plcg1 protein_coding retained_intron MGP_NODShiLtJ_T0058671.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180716189 180716812 + Plcg1 protein_coding retained_intron MGP_NODShiLtJ_T0058672.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180716214 180721090 + Plcg1 protein_coding processed_transcript MGP_NODShiLtJ_T0058673.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180716548 180718790 + Plcg1 protein_coding retained_intron MGP_NODShiLtJ_T0058674.1 MGP_NODShiLtJ_G0026626.1 mouse_genomes_project 2 180721760 180723860 + MGP_NODShiLtJ_P0058674 Plcg1 protein_coding protein_coding MGP_NODShiLtJ_T0054774.1 MGP_NODShiLtJ_G0025622.1 mouse_genomes_project 2 73047768 73156135 - MGP_NODShiLtJ_P0054774 Scn7a protein_coding protein_coding MGP_NODShiLtJ_T0011398.1 MGP_NODShiLtJ_G0009531.1 mouse_genomes_project 2 118469863 118469985 - Gm27636 misc_RNA misc_RNA MGP_NODShiLtJ_T0055594.1 MGP_NODShiLtJ_G0025916.1 mouse_genomes_project 2 99652573 99653545 - MGP_NODShiLtJ_P0055594 Olfr1228 protein_coding protein_coding MGP_NODShiLtJ_T0013626.1 MGP_NODShiLtJ_G0011734.1 mouse_genomes_project 2 137219814 137220221 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054612.1 MGP_NODShiLtJ_G0025597.1 mouse_genomes_project 2 65601675 65697750 - MGP_NODShiLtJ_P0054612 Ly75 protein_coding protein_coding MGP_NODShiLtJ_T0054613.1 MGP_NODShiLtJ_G0025597.1 mouse_genomes_project 2 65603332 65697678 - MGP_NODShiLtJ_P0054613 Ly75 protein_coding protein_coding MGP_NODShiLtJ_T0003938.1 MGP_NODShiLtJ_G0003506.1 mouse_genomes_project 2 73786097 73895686 - Gm13599 antisense antisense MGP_NODShiLtJ_T0058433.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175764169 175822437 + MGP_NODShiLtJ_P0058433 Phf20 protein_coding protein_coding MGP_NODShiLtJ_T0058434.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175764345 175883091 + MGP_NODShiLtJ_P0058434 Phf20 protein_coding protein_coding MGP_NODShiLtJ_T0058435.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175764437 175883089 + Phf20 protein_coding processed_transcript MGP_NODShiLtJ_T0058436.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175764457 175790506 + Phf20 protein_coding retained_intron MGP_NODShiLtJ_T0058437.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175764459 175822639 + Phf20 protein_coding retained_intron MGP_NODShiLtJ_T0058438.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175789471 175819952 + Phf20 protein_coding processed_transcript MGP_NODShiLtJ_T0058439.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175831180 175841895 + Phf20 protein_coding processed_transcript MGP_NODShiLtJ_T0058440.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175852606 175862418 + Phf20 protein_coding processed_transcript MGP_NODShiLtJ_T0058441.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175863638 175868498 + Phf20 protein_coding retained_intron MGP_NODShiLtJ_T0058442.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175865922 175868590 + Phf20 protein_coding processed_transcript MGP_NODShiLtJ_T0058443.1 MGP_NODShiLtJ_G0026581.1 mouse_genomes_project 2 175866299 175875456 + Phf20 protein_coding processed_transcript MGP_NODShiLtJ_T0001056.1 MGP_NODShiLtJ_G0000982.1 mouse_genomes_project 2 75567462 75570988 + TEC TEC MGP_NODShiLtJ_T0013614.1 MGP_NODShiLtJ_G0011722.1 mouse_genomes_project 2 130099738 130100632 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013760.1 MGP_NODShiLtJ_G0011868.1 mouse_genomes_project 2 200439902 200440914 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004019.1 MGP_NODShiLtJ_G0003559.1 mouse_genomes_project 2 141431052 141442123 - Gm14002 antisense antisense MGP_NODShiLtJ_T0004103.1 MGP_NODShiLtJ_G0003622.1 mouse_genomes_project 2 184409646 184414370 + Gm11455 antisense antisense MGP_NODShiLtJ_T0001073.1 MGP_NODShiLtJ_G0000998.1 mouse_genomes_project 2 153904751 153905017 + TEC TEC MGP_NODShiLtJ_T0052869.1 MGP_NODShiLtJ_G0025289.1 mouse_genomes_project 2 25163686 25167144 - MGP_NODShiLtJ_P0052869 C8g protein_coding protein_coding MGP_NODShiLtJ_T0052870.1 MGP_NODShiLtJ_G0025289.1 mouse_genomes_project 2 25163686 25165649 - MGP_NODShiLtJ_P0052870 C8g protein_coding protein_coding MGP_NODShiLtJ_T0052871.1 MGP_NODShiLtJ_G0025289.1 mouse_genomes_project 2 25163691 25165291 - C8g protein_coding processed_transcript MGP_NODShiLtJ_T0052872.1 MGP_NODShiLtJ_G0025289.1 mouse_genomes_project 2 25163691 25164538 - C8g protein_coding processed_transcript MGP_NODShiLtJ_T0052873.1 MGP_NODShiLtJ_G0025289.1 mouse_genomes_project 2 25163691 25165271 - C8g protein_coding processed_transcript MGP_NODShiLtJ_T0052874.1 MGP_NODShiLtJ_G0025289.1 mouse_genomes_project 2 25163693 25165279 - C8g protein_coding processed_transcript MGP_NODShiLtJ_T0052875.1 MGP_NODShiLtJ_G0025289.1 mouse_genomes_project 2 25163932 25165150 - C8g protein_coding processed_transcript MGP_NODShiLtJ_T0052940.1 MGP_NODShiLtJ_G0025309.1 mouse_genomes_project 2 25488689 25507650 - MGP_NODShiLtJ_P0052940 Glt6d1 protein_coding protein_coding MGP_NODShiLtJ_T0052941.1 MGP_NODShiLtJ_G0025309.1 mouse_genomes_project 2 25490044 25507633 - Glt6d1 protein_coding processed_transcript MGP_NODShiLtJ_T0054193.1 MGP_NODShiLtJ_G0025515.1 mouse_genomes_project 2 37505109 37506042 - MGP_NODShiLtJ_P0054193 Olfr351 protein_coding protein_coding MGP_NODShiLtJ_T0057403.1 MGP_NODShiLtJ_G0026334.1 mouse_genomes_project 2 147514889 147647986 + MGP_NODShiLtJ_P0057403 Atrn protein_coding protein_coding MGP_NODShiLtJ_T0057404.1 MGP_NODShiLtJ_G0026334.1 mouse_genomes_project 2 147514895 147621997 + Atrn protein_coding retained_intron MGP_NODShiLtJ_T0057405.1 MGP_NODShiLtJ_G0026334.1 mouse_genomes_project 2 147515325 147546877 + Atrn protein_coding retained_intron MGP_NODShiLtJ_T0057406.1 MGP_NODShiLtJ_G0026334.1 mouse_genomes_project 2 147597219 147610205 + Atrn protein_coding retained_intron MGP_NODShiLtJ_T0057407.1 MGP_NODShiLtJ_G0026334.1 mouse_genomes_project 2 147611802 147622025 + Atrn protein_coding retained_intron MGP_NODShiLtJ_T0011376.1 MGP_NODShiLtJ_G0009509.1 mouse_genomes_project 2 6045909 6046200 - Gm24534 misc_RNA misc_RNA MGP_NODShiLtJ_T0013686.1 MGP_NODShiLtJ_G0011794.1 mouse_genomes_project 2 165805521 165806003 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013584.1 MGP_NODShiLtJ_G0011692.1 mouse_genomes_project 2 117856818 117857005 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055777.1 MGP_NODShiLtJ_G0025970.1 mouse_genomes_project 2 102075091 102102590 - Ddb2 protein_coding processed_transcript MGP_NODShiLtJ_T0055778.1 MGP_NODShiLtJ_G0025970.1 mouse_genomes_project 2 102075107 102103996 - Ddb2 protein_coding processed_transcript MGP_NODShiLtJ_T0055779.1 MGP_NODShiLtJ_G0025970.1 mouse_genomes_project 2 102075122 102103974 - MGP_NODShiLtJ_P0055779 Ddb2 protein_coding protein_coding MGP_NODShiLtJ_T0055780.1 MGP_NODShiLtJ_G0025970.1 mouse_genomes_project 2 102075140 102104049 - Ddb2 protein_coding processed_transcript MGP_NODShiLtJ_T0055781.1 MGP_NODShiLtJ_G0025970.1 mouse_genomes_project 2 102075375 102104071 - MGP_NODShiLtJ_P0055781 Ddb2 protein_coding protein_coding MGP_NODShiLtJ_T0058230.1 MGP_NODShiLtJ_G0026552.1 mouse_genomes_project 2 174771999 174795049 - Pigu protein_coding processed_transcript MGP_NODShiLtJ_T0058231.1 MGP_NODShiLtJ_G0026552.1 mouse_genomes_project 2 174771999 174868543 - MGP_NODShiLtJ_P0058231 Pigu protein_coding protein_coding MGP_NODShiLtJ_T0058232.1 MGP_NODShiLtJ_G0026552.1 mouse_genomes_project 2 174772000 174868537 - MGP_NODShiLtJ_P0058232 Pigu protein_coding protein_coding MGP_NODShiLtJ_T0058233.1 MGP_NODShiLtJ_G0026552.1 mouse_genomes_project 2 174795012 174798386 - Pigu protein_coding processed_transcript MGP_NODShiLtJ_T0058234.1 MGP_NODShiLtJ_G0026552.1 mouse_genomes_project 2 174831463 174868532 - Pigu protein_coding retained_intron MGP_NODShiLtJ_T0052990.1 MGP_NODShiLtJ_G0025317.1 mouse_genomes_project 2 25936818 25966028 - MGP_NODShiLtJ_P0052990 Qsox2 protein_coding protein_coding MGP_NODShiLtJ_T0052991.1 MGP_NODShiLtJ_G0025317.1 mouse_genomes_project 2 25936820 25966201 - MGP_NODShiLtJ_P0052991 Qsox2 protein_coding protein_coding MGP_NODShiLtJ_T0003866.1 MGP_NODShiLtJ_G0003451.1 mouse_genomes_project 2 25388010 25389516 - A230005M16Rik antisense antisense MGP_NODShiLtJ_T0003867.1 MGP_NODShiLtJ_G0003451.1 mouse_genomes_project 2 25388667 25390426 - A230005M16Rik antisense antisense MGP_NODShiLtJ_T0017651.1 MGP_NODShiLtJ_G0015306.1 mouse_genomes_project 2 98082489 98101673 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017736.1 MGP_NODShiLtJ_G0015345.1 mouse_genomes_project 2 169544733 169548777 + Gm14123 processed_transcript processed_transcript MGP_NODShiLtJ_T0003910.1 MGP_NODShiLtJ_G0003485.1 mouse_genomes_project 2 39190700 39195101 - Gm13584 antisense antisense MGP_NODShiLtJ_T0052146.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3786655 4710537 - MGP_NODShiLtJ_P0052146 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052147.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3786666 3979509 - MGP_NODShiLtJ_P0052147 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052148.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3786666 4156503 - MGP_NODShiLtJ_P0052148 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052149.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3786666 4156503 - MGP_NODShiLtJ_P0052149 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052150.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3788830 4156503 - MGP_NODShiLtJ_P0052150 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052151.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3790389 4360601 - MGP_NODShiLtJ_P0052151 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052152.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3791768 4156454 - MGP_NODShiLtJ_P0052152 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052153.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3791802 4360541 - MGP_NODShiLtJ_P0052153 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052154.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3791802 3979509 - MGP_NODShiLtJ_P0052154 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052155.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3792596 3979822 - MGP_NODShiLtJ_P0052155 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052156.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3793201 3979507 - MGP_NODShiLtJ_P0052156 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052157.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3793201 3979507 - MGP_NODShiLtJ_P0052157 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052158.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3794479 4156453 - MGP_NODShiLtJ_P0052158 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052159.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3794724 4141497 - MGP_NODShiLtJ_P0052159 Celf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052160.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3794737 3844256 - Celf2 protein_coding processed_transcript MGP_NODShiLtJ_T0052161.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3801754 4710430 - MGP_NODShiLtJ_P0052161 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052162.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3837135 3979509 - Celf2 protein_coding retained_intron MGP_NODShiLtJ_T0052163.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3856885 3870031 - Celf2 protein_coding processed_transcript MGP_NODShiLtJ_T0052164.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3860479 4156135 - Celf2 protein_coding processed_transcript MGP_NODShiLtJ_T0052165.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3869579 4710736 - MGP_NODShiLtJ_P0052165 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052166.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3874089 4156399 - Celf2 protein_coding retained_intron MGP_NODShiLtJ_T0052167.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3877379 3980110 - Celf2 protein_coding retained_intron MGP_NODShiLtJ_T0052168.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3878555 4140872 - MGP_NODShiLtJ_P0052168 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052169.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3916494 4156399 - Celf2 protein_coding retained_intron MGP_NODShiLtJ_T0052170.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3920203 4360506 - MGP_NODShiLtJ_P0052170 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052171.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 3979349 3980103 - MGP_NODShiLtJ_P0052171 Celf2 protein_coding protein_coding MGP_NODShiLtJ_T0052172.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 4354432 4360612 - Celf2 protein_coding processed_transcript MGP_NODShiLtJ_T0052173.1 MGP_NODShiLtJ_G0025170.1 mouse_genomes_project 2 4708610 4817275 - Celf2 protein_coding processed_transcript MGP_NODShiLtJ_T0013551.1 MGP_NODShiLtJ_G0011659.1 mouse_genomes_project 2 103564412 103564824 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101800.1 MGP_NODShiLtJ_G0039968.1 mouse_genomes_project 2 94512657 94513566 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059517.1 MGP_NODShiLtJ_G0026831.1 mouse_genomes_project 2 202789296 202792136 + MGP_NODShiLtJ_P0059517 BC051628 protein_coding protein_coding MGP_NODShiLtJ_T0059518.1 MGP_NODShiLtJ_G0026831.1 mouse_genomes_project 2 202789320 202791731 + MGP_NODShiLtJ_P0059518 BC051628 protein_coding protein_coding MGP_NODShiLtJ_T0004038.1 MGP_NODShiLtJ_G0003573.1 mouse_genomes_project 2 148980135 148989037 + AV099323 antisense antisense MGP_NODShiLtJ_T0052386.1 MGP_NODShiLtJ_G0025205.1 mouse_genomes_project 2 13856563 14794241 + MGP_NODShiLtJ_P0052386 Malrd1 protein_coding protein_coding MGP_NODShiLtJ_T0052387.1 MGP_NODShiLtJ_G0025205.1 mouse_genomes_project 2 14194380 14574517 + MGP_NODShiLtJ_P0052387 Malrd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052070.1 MGP_NODShiLtJ_G0025154.1 mouse_genomes_project 2 1958160 1992699 + MGP_NODShiLtJ_P0052070 Sephs1 protein_coding protein_coding MGP_NODShiLtJ_T0052071.1 MGP_NODShiLtJ_G0025154.1 mouse_genomes_project 2 1958840 1990279 + MGP_NODShiLtJ_P0052071 Sephs1 protein_coding protein_coding MGP_NODShiLtJ_T0052072.1 MGP_NODShiLtJ_G0025154.1 mouse_genomes_project 2 1960652 1965812 + Sephs1 protein_coding processed_transcript MGP_NODShiLtJ_T0052073.1 MGP_NODShiLtJ_G0025154.1 mouse_genomes_project 2 1960979 1987675 + Sephs1 protein_coding processed_transcript MGP_NODShiLtJ_T0055470.1 MGP_NODShiLtJ_G0025805.1 mouse_genomes_project 2 95825440 95826382 + MGP_NODShiLtJ_P0055470 Olfr1076 protein_coding protein_coding MGP_NODShiLtJ_T0003891.1 MGP_NODShiLtJ_G0003469.1 mouse_genomes_project 2 31841136 31860551 - Gm13427 antisense antisense MGP_NODShiLtJ_T0013383.1 MGP_NODShiLtJ_G0011491.1 mouse_genomes_project 2 39628807 39629413 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013557.1 MGP_NODShiLtJ_G0011665.1 mouse_genomes_project 2 107005316 107005455 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053402.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 29990201 30057456 + MGP_NODShiLtJ_P0053402 Sptan1 protein_coding protein_coding MGP_NODShiLtJ_T0053403.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 29990201 30057459 + MGP_NODShiLtJ_P0053403 Sptan1 protein_coding protein_coding MGP_NODShiLtJ_T0053404.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 29990318 30019348 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0053405.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 29990320 29991791 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0053406.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 29990321 30057459 + MGP_NODShiLtJ_P0053406 Sptan1 protein_coding protein_coding MGP_NODShiLtJ_T0053407.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 29990321 30009041 + MGP_NODShiLtJ_P0053407 Sptan1 protein_coding protein_coding MGP_NODShiLtJ_T0053408.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 29990321 30057453 + MGP_NODShiLtJ_P0053408 Sptan1 protein_coding protein_coding MGP_NODShiLtJ_T0053409.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 29990324 30057459 + MGP_NODShiLtJ_P0053409 Sptan1 protein_coding protein_coding MGP_NODShiLtJ_T0053410.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 30003292 30057192 + MGP_NODShiLtJ_P0053410 Sptan1 protein_coding protein_coding MGP_NODShiLtJ_T0053411.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 30017266 30019341 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0053412.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 30027191 30033410 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0053413.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 30029395 30031954 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0053414.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 30047828 30050991 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0053415.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 30053571 30056525 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0053416.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 30053604 30056509 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0053417.1 MGP_NODShiLtJ_G0025387.1 mouse_genomes_project 2 30056316 30057183 + Sptan1 protein_coding retained_intron MGP_NODShiLtJ_T0004064.1 MGP_NODShiLtJ_G0003589.1 mouse_genomes_project 2 164681391 164689272 + A930019D19Rik antisense antisense MGP_NODShiLtJ_T0101787.1 MGP_NODShiLtJ_G0039955.1 mouse_genomes_project 2 36810439 36811345 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001017.1 MGP_NODShiLtJ_G0000943.1 mouse_genomes_project 2 11237633 11239893 - TEC TEC MGP_NODShiLtJ_T0007239.1 MGP_NODShiLtJ_G0005930.1 mouse_genomes_project 2 130671784 130697680 - 3110099E03Rik lincRNA lincRNA MGP_NODShiLtJ_T0007240.1 MGP_NODShiLtJ_G0005930.1 mouse_genomes_project 2 130674455 130716466 - 3110099E03Rik lincRNA lincRNA MGP_NODShiLtJ_T0007241.1 MGP_NODShiLtJ_G0005930.1 mouse_genomes_project 2 130675160 130697686 - 3110099E03Rik lincRNA lincRNA MGP_NODShiLtJ_T0055134.1 MGP_NODShiLtJ_G0025704.1 mouse_genomes_project 2 84086413 84089363 + MGP_NODShiLtJ_P0055134 Dfnb59 protein_coding protein_coding MGP_NODShiLtJ_T0055135.1 MGP_NODShiLtJ_G0025704.1 mouse_genomes_project 2 84086436 84094040 + MGP_NODShiLtJ_P0055135 Dfnb59 protein_coding protein_coding MGP_NODShiLtJ_T0055136.1 MGP_NODShiLtJ_G0025704.1 mouse_genomes_project 2 84088210 84096793 + MGP_NODShiLtJ_P0055136 Dfnb59 protein_coding protein_coding MGP_NODShiLtJ_T0010248.1 MGP_NODShiLtJ_G0008381.1 mouse_genomes_project 2 8352068 8352518 + miRNA miRNA MGP_NODShiLtJ_T0013689.1 MGP_NODShiLtJ_G0011797.1 mouse_genomes_project 2 166198446 166198776 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057229.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145058053 145135942 - MGP_NODShiLtJ_P0057229 Anapc1 protein_coding protein_coding MGP_NODShiLtJ_T0057230.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145063352 145066106 - Anapc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057231.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145065536 145070810 - Anapc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057232.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145070339 145075426 - Anapc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057233.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145071704 145076604 - Anapc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057234.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145076507 145078000 - Anapc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057235.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145090058 145135927 - MGP_NODShiLtJ_P0057235 Anapc1 protein_coding protein_coding MGP_NODShiLtJ_T0057236.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145106421 145111878 - Anapc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057237.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145108300 145112721 - Anapc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057238.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145125771 145135926 - Anapc1 protein_coding processed_transcript MGP_NODShiLtJ_T0057239.1 MGP_NODShiLtJ_G0026291.1 mouse_genomes_project 2 145133599 145135905 - MGP_NODShiLtJ_P0057239 Anapc1 protein_coding protein_coding MGP_NODShiLtJ_T0059281.1 MGP_NODShiLtJ_G0026779.1 mouse_genomes_project 2 195054331 195102159 + MGP_NODShiLtJ_P0059281 Vapb protein_coding protein_coding MGP_NODShiLtJ_T0059282.1 MGP_NODShiLtJ_G0026779.1 mouse_genomes_project 2 195085258 195095932 + Vapb protein_coding processed_transcript MGP_NODShiLtJ_T0053370.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902109 29913996 + MGP_NODShiLtJ_P0053370 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053371.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902122 29905466 + Odf2 protein_coding retained_intron MGP_NODShiLtJ_T0053372.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902608 29938715 + MGP_NODShiLtJ_P0053372 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053373.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902673 29938715 + MGP_NODShiLtJ_P0053373 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053374.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902683 29947276 + MGP_NODShiLtJ_P0053374 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053375.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902683 29947926 + MGP_NODShiLtJ_P0053375 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053376.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902686 29947276 + MGP_NODShiLtJ_P0053376 Odf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053377.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902699 29915165 + Odf2 protein_coding processed_transcript MGP_NODShiLtJ_T0053378.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902703 29915135 + MGP_NODShiLtJ_P0053378 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053379.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902705 29947926 + MGP_NODShiLtJ_P0053379 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053380.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902706 29938715 + MGP_NODShiLtJ_P0053380 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053381.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902713 29914382 + Odf2 protein_coding retained_intron MGP_NODShiLtJ_T0053382.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902722 29916963 + MGP_NODShiLtJ_P0053382 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053383.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902783 29947927 + MGP_NODShiLtJ_P0053383 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053384.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902951 29938715 + MGP_NODShiLtJ_P0053384 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053385.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29902971 29903879 + Odf2 protein_coding processed_transcript MGP_NODShiLtJ_T0053386.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29903031 29938715 + MGP_NODShiLtJ_P0053386 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053387.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29903044 29947276 + MGP_NODShiLtJ_P0053387 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053388.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29903428 29938712 + MGP_NODShiLtJ_P0053388 Odf2 protein_coding protein_coding MGP_NODShiLtJ_T0053389.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29904884 29914010 + Odf2 protein_coding processed_transcript MGP_NODShiLtJ_T0053390.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29916427 29929651 + Odf2 protein_coding processed_transcript MGP_NODShiLtJ_T0053391.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29916458 29930092 + Odf2 protein_coding processed_transcript MGP_NODShiLtJ_T0053392.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29927401 29930055 + Odf2 protein_coding retained_intron MGP_NODShiLtJ_T0053393.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29929171 29933973 + Odf2 protein_coding retained_intron MGP_NODShiLtJ_T0053394.1 MGP_NODShiLtJ_G0025385.1 mouse_genomes_project 2 29941647 29942921 + Odf2 protein_coding retained_intron MGP_NODShiLtJ_T0013753.1 MGP_NODShiLtJ_G0011861.1 mouse_genomes_project 2 191478652 191478958 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059633.1 MGP_NODShiLtJ_G0026849.1 mouse_genomes_project 2 203315200 203322239 + Tcea2 protein_coding retained_intron MGP_NODShiLtJ_T0059634.1 MGP_NODShiLtJ_G0026849.1 mouse_genomes_project 2 203315200 203322963 + MGP_NODShiLtJ_P0059634 Tcea2 protein_coding protein_coding MGP_NODShiLtJ_T0059635.1 MGP_NODShiLtJ_G0026849.1 mouse_genomes_project 2 203316080 203322943 + MGP_NODShiLtJ_P0059635 Tcea2 protein_coding protein_coding MGP_NODShiLtJ_T0059636.1 MGP_NODShiLtJ_G0026849.1 mouse_genomes_project 2 203317775 203322937 + MGP_NODShiLtJ_P0059636 Tcea2 protein_coding protein_coding MGP_NODShiLtJ_T0059637.1 MGP_NODShiLtJ_G0026849.1 mouse_genomes_project 2 203318056 203321184 + Tcea2 protein_coding processed_transcript MGP_NODShiLtJ_T0059638.1 MGP_NODShiLtJ_G0026849.1 mouse_genomes_project 2 203318465 203322803 + Tcea2 protein_coding retained_intron MGP_NODShiLtJ_T0059639.1 MGP_NODShiLtJ_G0026849.1 mouse_genomes_project 2 203318491 203321826 + Tcea2 protein_coding retained_intron MGP_NODShiLtJ_T0059640.1 MGP_NODShiLtJ_G0026849.1 mouse_genomes_project 2 203322407 203322954 + Tcea2 protein_coding processed_transcript MGP_NODShiLtJ_T0010356.1 MGP_NODShiLtJ_G0008489.1 mouse_genomes_project 2 147657970 147658050 - Mir6973b miRNA miRNA MGP_NODShiLtJ_T0007193.1 MGP_NODShiLtJ_G0005891.1 mouse_genomes_project 2 87173480 87180605 + Gm26755 lincRNA lincRNA MGP_NODShiLtJ_T0007153.1 MGP_NODShiLtJ_G0005858.1 mouse_genomes_project 2 65408382 65409106 + Gm13620 lincRNA lincRNA MGP_NODShiLtJ_T0058083.1 MGP_NODShiLtJ_G0026511.1 mouse_genomes_project 2 172517051 172567965 + MGP_NODShiLtJ_P0058083 Kif3b protein_coding protein_coding MGP_NODShiLtJ_T0100350.1 MGP_NODShiLtJ_G0038744.1 mouse_genomes_project 2 26676571 26676645 + Gm22879 snoRNA snoRNA MGP_NODShiLtJ_T0055233.1 MGP_NODShiLtJ_G0025717.1 mouse_genomes_project 2 87459729 87574708 + MGP_NODShiLtJ_P0055233 Ppp1r1c protein_coding protein_coding MGP_NODShiLtJ_T0055234.1 MGP_NODShiLtJ_G0025717.1 mouse_genomes_project 2 87459871 87572947 + MGP_NODShiLtJ_P0055234 Ppp1r1c protein_coding protein_coding MGP_NODShiLtJ_T0055235.1 MGP_NODShiLtJ_G0025717.1 mouse_genomes_project 2 87459872 87580007 + MGP_NODShiLtJ_P0055235 Ppp1r1c protein_coding protein_coding MGP_NODShiLtJ_T0055236.1 MGP_NODShiLtJ_G0025717.1 mouse_genomes_project 2 87460011 87583868 + Ppp1r1c protein_coding processed_transcript MGP_NODShiLtJ_T0055237.1 MGP_NODShiLtJ_G0025717.1 mouse_genomes_project 2 87550140 87573703 + Ppp1r1c protein_coding processed_transcript MGP_NODShiLtJ_T0017701.1 MGP_NODShiLtJ_G0015330.1 mouse_genomes_project 2 136523921 136541630 + AV039307 processed_transcript processed_transcript MGP_NODShiLtJ_T0017702.1 MGP_NODShiLtJ_G0015330.1 mouse_genomes_project 2 136523933 136541764 + AV039307 processed_transcript processed_transcript MGP_NODShiLtJ_T0017703.1 MGP_NODShiLtJ_G0015330.1 mouse_genomes_project 2 136541307 136541631 + AV039307 processed_transcript processed_transcript MGP_NODShiLtJ_T0058581.1 MGP_NODShiLtJ_G0026606.1 mouse_genomes_project 2 177657262 177689827 + MGP_NODShiLtJ_P0058581 Vstm2l protein_coding protein_coding MGP_NODShiLtJ_T0004122.1 MGP_NODShiLtJ_G0003637.1 mouse_genomes_project 2 191599509 191601887 + Gm14637 antisense antisense MGP_NODShiLtJ_T0010255.1 MGP_NODShiLtJ_G0008388.1 mouse_genomes_project 2 8359453 8359549 + Gm23542 miRNA miRNA MGP_NODShiLtJ_T0010278.1 MGP_NODShiLtJ_G0008411.1 mouse_genomes_project 2 24533568 24533694 + Gm22875 miRNA miRNA MGP_NODShiLtJ_T0058146.1 MGP_NODShiLtJ_G0026532.1 mouse_genomes_project 2 173685450 173700126 + MGP_NODShiLtJ_P0058146 protein_coding protein_coding MGP_NODShiLtJ_T0010312.1 MGP_NODShiLtJ_G0008445.1 mouse_genomes_project 2 61769285 61769382 + Mir195b miRNA miRNA MGP_NODShiLtJ_T0007164.1 MGP_NODShiLtJ_G0005869.1 mouse_genomes_project 2 78772201 78774280 - Gm17250 lincRNA lincRNA MGP_NODShiLtJ_T0054517.1 MGP_NODShiLtJ_G0025582.1 mouse_genomes_project 2 63251441 63259211 - MGP_NODShiLtJ_P0054517 Ermn protein_coding protein_coding MGP_NODShiLtJ_T0001015.1 MGP_NODShiLtJ_G0000941.1 mouse_genomes_project 2 11115023 11116636 + TEC TEC MGP_NODShiLtJ_T0010287.1 MGP_NODShiLtJ_G0008420.1 mouse_genomes_project 2 28661399 28661473 + Mir3088 miRNA miRNA MGP_NODShiLtJ_T0052807.1 MGP_NODShiLtJ_G0025280.1 mouse_genomes_project 2 25022914 25028817 + MGP_NODShiLtJ_P0052807 Sapcd2 protein_coding protein_coding MGP_NODShiLtJ_T0052808.1 MGP_NODShiLtJ_G0025280.1 mouse_genomes_project 2 25022923 25027407 + MGP_NODShiLtJ_P0052808 Sapcd2 protein_coding protein_coding MGP_NODShiLtJ_T0052809.1 MGP_NODShiLtJ_G0025280.1 mouse_genomes_project 2 25022927 25027407 + MGP_NODShiLtJ_P0052809 Sapcd2 protein_coding protein_coding MGP_NODShiLtJ_T0052810.1 MGP_NODShiLtJ_G0025280.1 mouse_genomes_project 2 25022953 25025732 + Sapcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0052811.1 MGP_NODShiLtJ_G0025280.1 mouse_genomes_project 2 25025609 25026876 + Sapcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0052812.1 MGP_NODShiLtJ_G0025280.1 mouse_genomes_project 2 25026377 25027381 + Sapcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0052813.1 MGP_NODShiLtJ_G0025280.1 mouse_genomes_project 2 25026563 25027404 + Sapcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0007271.1 MGP_NODShiLtJ_G0005953.1 mouse_genomes_project 2 149230254 149248187 - Gm14095 lincRNA lincRNA MGP_NODShiLtJ_T0100390.1 MGP_NODShiLtJ_G0038784.1 mouse_genomes_project 2 127306042 127306171 + Gm22676 snoRNA snoRNA MGP_NODShiLtJ_T0013754.1 MGP_NODShiLtJ_G0011862.1 mouse_genomes_project 2 192011805 192013082 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010339.1 MGP_NODShiLtJ_G0008472.1 mouse_genomes_project 2 117691348 117691428 - Mir1902 miRNA miRNA MGP_NODShiLtJ_T0013316.1 MGP_NODShiLtJ_G0011424.1 mouse_genomes_project 2 13627584 13628380 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010369.1 MGP_NODShiLtJ_G0008502.1 mouse_genomes_project 2 177272961 177273048 - Gm23134 miRNA miRNA MGP_NODShiLtJ_T0057978.1 MGP_NODShiLtJ_G0026475.1 mouse_genomes_project 2 171471105 171479208 - MGP_NODShiLtJ_P0057978 Trib3 protein_coding protein_coding MGP_NODShiLtJ_T0057979.1 MGP_NODShiLtJ_G0026475.1 mouse_genomes_project 2 171473432 171479164 - Trib3 protein_coding processed_transcript MGP_NODShiLtJ_T0057980.1 MGP_NODShiLtJ_G0026475.1 mouse_genomes_project 2 171478139 171479146 - Trib3 protein_coding retained_intron MGP_NODShiLtJ_T0100369.1 MGP_NODShiLtJ_G0038763.1 mouse_genomes_project 2 62782835 62782986 - Gm25388 snoRNA snoRNA MGP_NODShiLtJ_T0057616.1 MGP_NODShiLtJ_G0026376.1 mouse_genomes_project 2 153940435 154010748 + MGP_NODShiLtJ_P0057616 Snap25 protein_coding protein_coding MGP_NODShiLtJ_T0057617.1 MGP_NODShiLtJ_G0026376.1 mouse_genomes_project 2 153940436 153990758 + Snap25 protein_coding retained_intron MGP_NODShiLtJ_T0057618.1 MGP_NODShiLtJ_G0026376.1 mouse_genomes_project 2 153940460 154009670 + MGP_NODShiLtJ_P0057618 Snap25 protein_coding protein_coding MGP_NODShiLtJ_T0056370.1 MGP_NODShiLtJ_G0026109.1 mouse_genomes_project 2 127296698 127437984 + MGP_NODShiLtJ_P0056370 Aven protein_coding protein_coding MGP_NODShiLtJ_T0056371.1 MGP_NODShiLtJ_G0026109.1 mouse_genomes_project 2 127362603 127433539 + Aven protein_coding processed_transcript MGP_NODShiLtJ_T0056372.1 MGP_NODShiLtJ_G0026109.1 mouse_genomes_project 2 127362955 127434374 + MGP_NODShiLtJ_P0056372 Aven protein_coding protein_coding MGP_NODShiLtJ_T0100340.1 MGP_NODShiLtJ_G0038734.1 mouse_genomes_project 2 7910915 7911043 - Gm23608 snoRNA snoRNA MGP_NODShiLtJ_T0013512.1 MGP_NODShiLtJ_G0011620.1 mouse_genomes_project 2 90976710 90977301 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004136.1 MGP_NODShiLtJ_G0003645.1 mouse_genomes_project 2 201601667 201603257 + Gm17180 antisense antisense MGP_NODShiLtJ_T0100418.1 MGP_NODShiLtJ_G0038812.1 mouse_genomes_project 2 178149812 178149945 + Gm25187 snoRNA snoRNA MGP_NODShiLtJ_T0055619.1 MGP_NODShiLtJ_G0025936.1 mouse_genomes_project 2 100415802 100421471 - MGP_NODShiLtJ_P0055619 Olfr1254 protein_coding protein_coding MGP_NODShiLtJ_T0055620.1 MGP_NODShiLtJ_G0025936.1 mouse_genomes_project 2 100415802 100416747 - MGP_NODShiLtJ_P0055620 Olfr1254 protein_coding protein_coding MGP_NODShiLtJ_T0055452.1 MGP_NODShiLtJ_G0025787.1 mouse_genomes_project 2 95240621 95241563 - MGP_NODShiLtJ_P0055452 protein_coding protein_coding MGP_NODShiLtJ_T0007081.1 MGP_NODShiLtJ_G0005802.1 mouse_genomes_project 2 8917474 8944922 + Gm13264 lincRNA lincRNA MGP_NODShiLtJ_T0054335.1 MGP_NODShiLtJ_G0025551.1 mouse_genomes_project 2 45794686 45802790 + Kynu protein_coding processed_transcript MGP_NODShiLtJ_T0054336.1 MGP_NODShiLtJ_G0025551.1 mouse_genomes_project 2 45794686 45941700 + MGP_NODShiLtJ_P0054336 Kynu protein_coding protein_coding MGP_NODShiLtJ_T0054337.1 MGP_NODShiLtJ_G0025551.1 mouse_genomes_project 2 45794699 45938535 + MGP_NODShiLtJ_P0054337 Kynu protein_coding protein_coding MGP_NODShiLtJ_T0054338.1 MGP_NODShiLtJ_G0025551.1 mouse_genomes_project 2 45794711 45889224 + MGP_NODShiLtJ_P0054338 Kynu protein_coding protein_coding MGP_NODShiLtJ_T0054339.1 MGP_NODShiLtJ_G0025551.1 mouse_genomes_project 2 45842816 45849401 + Kynu protein_coding processed_transcript MGP_NODShiLtJ_T0098192.1 MGP_NODShiLtJ_G0036604.1 mouse_genomes_project 2 120306759 120306882 + Gm22813 scaRNA scaRNA MGP_NODShiLtJ_T0056257.1 MGP_NODShiLtJ_G0026056.1 mouse_genomes_project 2 119395003 119432718 - Dnajc24 protein_coding processed_transcript MGP_NODShiLtJ_T0056258.1 MGP_NODShiLtJ_G0026056.1 mouse_genomes_project 2 119395183 119432727 - MGP_NODShiLtJ_P0056258 Dnajc24 protein_coding protein_coding MGP_NODShiLtJ_T0056259.1 MGP_NODShiLtJ_G0026056.1 mouse_genomes_project 2 119395231 119432657 - Dnajc24 protein_coding processed_transcript MGP_NODShiLtJ_T0056260.1 MGP_NODShiLtJ_G0026056.1 mouse_genomes_project 2 119398658 119431532 - Dnajc24 protein_coding processed_transcript MGP_NODShiLtJ_T0001028.1 MGP_NODShiLtJ_G0000954.1 mouse_genomes_project 2 13216936 13218873 + TEC TEC MGP_NODShiLtJ_T0010327.1 MGP_NODShiLtJ_G0008460.1 mouse_genomes_project 2 102894898 102894959 - Mir6999 miRNA miRNA MGP_NODShiLtJ_T0007348.1 MGP_NODShiLtJ_G0006017.1 mouse_genomes_project 2 188944684 188950192 - Gm14235 lincRNA lincRNA MGP_NODShiLtJ_T0053811.1 MGP_NODShiLtJ_G0025442.1 mouse_genomes_project 2 32626460 32631227 - MGP_NODShiLtJ_P0053811 1110008P14Rik protein_coding protein_coding MGP_NODShiLtJ_T0053812.1 MGP_NODShiLtJ_G0025442.1 mouse_genomes_project 2 32628465 32631303 - MGP_NODShiLtJ_P0053812 1110008P14Rik protein_coding protein_coding MGP_NODShiLtJ_T0007311.1 MGP_NODShiLtJ_G0005986.1 mouse_genomes_project 2 176158238 176164888 + Gm14168 lincRNA lincRNA MGP_NODShiLtJ_T0055441.1 MGP_NODShiLtJ_G0025777.1 mouse_genomes_project 2 94947030 94948014 - MGP_NODShiLtJ_P0055441 Olfr1024 protein_coding protein_coding MGP_NODShiLtJ_T0010294.1 MGP_NODShiLtJ_G0008427.1 mouse_genomes_project 2 31769854 31769918 + Mir6998 miRNA miRNA MGP_NODShiLtJ_T0007373.1 MGP_NODShiLtJ_G0006039.1 mouse_genomes_project 2 196254748 196268159 - Gm14618 lincRNA lincRNA MGP_NODShiLtJ_T0004069.1 MGP_NODShiLtJ_G0003594.1 mouse_genomes_project 2 170775437 170782444 - Tmem74bos antisense antisense MGP_NODShiLtJ_T0004070.1 MGP_NODShiLtJ_G0003594.1 mouse_genomes_project 2 170776979 170782171 - Tmem74bos antisense antisense MGP_NODShiLtJ_T0010309.1 MGP_NODShiLtJ_G0008442.1 mouse_genomes_project 2 44355605 44355735 - Mir6336 miRNA miRNA MGP_NODShiLtJ_T0053887.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32980727 32989970 - MGP_NODShiLtJ_P0053887 Cdk9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053888.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32980727 32989622 - MGP_NODShiLtJ_P0053888 Cdk9 protein_coding protein_coding MGP_NODShiLtJ_T0053889.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32980741 32988013 - Cdk9 protein_coding retained_intron MGP_NODShiLtJ_T0053890.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32982395 32989744 - MGP_NODShiLtJ_P0053890 Cdk9 protein_coding protein_coding MGP_NODShiLtJ_T0053891.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32984307 32990036 - MGP_NODShiLtJ_P0053891 Cdk9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053892.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32985066 32986687 - Cdk9 protein_coding retained_intron MGP_NODShiLtJ_T0053893.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32986497 32987315 - Cdk9 protein_coding retained_intron MGP_NODShiLtJ_T0053894.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32986621 32987468 - Cdk9 protein_coding retained_intron MGP_NODShiLtJ_T0053895.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32986821 32989717 - MGP_NODShiLtJ_P0053895 Cdk9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053896.1 MGP_NODShiLtJ_G0025456.1 mouse_genomes_project 2 32987123 32989219 - MGP_NODShiLtJ_P0053896 Cdk9 protein_coding protein_coding MGP_NODShiLtJ_T0007159.1 MGP_NODShiLtJ_G0005864.1 mouse_genomes_project 2 73607505 73645049 - Gm13598 lincRNA lincRNA MGP_NODShiLtJ_T0101807.1 MGP_NODShiLtJ_G0039975.1 mouse_genomes_project 2 95187937 95188863 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013514.1 MGP_NODShiLtJ_G0011622.1 mouse_genomes_project 2 92012019 92012503 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003894.1 MGP_NODShiLtJ_G0003472.1 mouse_genomes_project 2 32222147 32222848 - Gm13609 antisense antisense MGP_NODShiLtJ_T0007341.1 MGP_NODShiLtJ_G0006012.1 mouse_genomes_project 2 188429095 188468204 + A530013C23Rik lincRNA lincRNA MGP_NODShiLtJ_T0007342.1 MGP_NODShiLtJ_G0006012.1 mouse_genomes_project 2 188429099 188435836 + A530013C23Rik lincRNA lincRNA MGP_NODShiLtJ_T0010338.1 MGP_NODShiLtJ_G0008471.1 mouse_genomes_project 2 117051707 117051803 - Gm22761 miRNA miRNA MGP_NODShiLtJ_T0013604.1 MGP_NODShiLtJ_G0011712.1 mouse_genomes_project 2 126209108 126210047 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010256.1 MGP_NODShiLtJ_G0008389.1 mouse_genomes_project 2 8359750 8359859 + Mir297b miRNA miRNA MGP_NODShiLtJ_T0055446.1 MGP_NODShiLtJ_G0025781.1 mouse_genomes_project 2 95064276 95065287 + MGP_NODShiLtJ_P0055446 Olfr1031 protein_coding protein_coding MGP_NODShiLtJ_T0056335.1 MGP_NODShiLtJ_G0026086.1 mouse_genomes_project 2 126435123 126436062 + MGP_NODShiLtJ_P0056335 Olfr1301 protein_coding protein_coding MGP_NODShiLtJ_T0052023.1 MGP_NODShiLtJ_G0025148.1 mouse_genomes_project 2 455523 485845 - MGP_NODShiLtJ_P0052023 protein_coding protein_coding MGP_NODShiLtJ_T0052024.1 MGP_NODShiLtJ_G0025148.1 mouse_genomes_project 2 455649 456836 - protein_coding retained_intron MGP_NODShiLtJ_T0052025.1 MGP_NODShiLtJ_G0025148.1 mouse_genomes_project 2 457631 458720 - protein_coding retained_intron MGP_NODShiLtJ_T0052026.1 MGP_NODShiLtJ_G0025148.1 mouse_genomes_project 2 463406 465545 - protein_coding retained_intron MGP_NODShiLtJ_T0052027.1 MGP_NODShiLtJ_G0025148.1 mouse_genomes_project 2 467941 470820 - protein_coding retained_intron MGP_NODShiLtJ_T0052028.1 MGP_NODShiLtJ_G0025148.1 mouse_genomes_project 2 472517 485788 - MGP_NODShiLtJ_P0052028 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052029.1 MGP_NODShiLtJ_G0025148.1 mouse_genomes_project 2 474399 485821 - MGP_NODShiLtJ_P0052029 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052030.1 MGP_NODShiLtJ_G0025148.1 mouse_genomes_project 2 483918 485774 - protein_coding retained_intron MGP_NODShiLtJ_T0056609.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135346926 135371342 - MGP_NODShiLtJ_P0056609 Rpap1 protein_coding protein_coding MGP_NODShiLtJ_T0056610.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135347580 135371366 - MGP_NODShiLtJ_P0056610 Rpap1 protein_coding protein_coding MGP_NODShiLtJ_T0056611.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135347581 135371375 - MGP_NODShiLtJ_P0056611 Rpap1 protein_coding protein_coding MGP_NODShiLtJ_T0056612.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135347584 135371338 - MGP_NODShiLtJ_P0056612 Rpap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056613.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135347587 135371358 - MGP_NODShiLtJ_P0056613 Rpap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056614.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135351373 135371357 - Rpap1 protein_coding retained_intron MGP_NODShiLtJ_T0056615.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135362028 135371352 - Rpap1 protein_coding retained_intron MGP_NODShiLtJ_T0056616.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135362242 135364405 - Rpap1 protein_coding retained_intron MGP_NODShiLtJ_T0056617.1 MGP_NODShiLtJ_G0026168.1 mouse_genomes_project 2 135362581 135371367 - Rpap1 protein_coding processed_transcript MGP_NODShiLtJ_T0059680.1 MGP_NODShiLtJ_G0026855.1 mouse_genomes_project 2 203508979 203515473 + MGP_NODShiLtJ_P0059680 Polr3k protein_coding protein_coding MGP_NODShiLtJ_T0059681.1 MGP_NODShiLtJ_G0026855.1 mouse_genomes_project 2 203509002 203510852 + Polr3k protein_coding retained_intron MGP_NODShiLtJ_T0055503.1 MGP_NODShiLtJ_G0025838.1 mouse_genomes_project 2 97223014 97223873 + MGP_NODShiLtJ_P0055503 Olfr1124 protein_coding protein_coding MGP_NODShiLtJ_T0099148.1 MGP_NODShiLtJ_G0037542.1 mouse_genomes_project 2 202749947 202750051 + Gm24892 snRNA snRNA MGP_NODShiLtJ_T0057556.1 MGP_NODShiLtJ_G0026364.1 mouse_genomes_project 2 149588614 149618306 + MGP_NODShiLtJ_P0057556 Mcm8 protein_coding protein_coding MGP_NODShiLtJ_T0057557.1 MGP_NODShiLtJ_G0026364.1 mouse_genomes_project 2 149588614 149618004 + MGP_NODShiLtJ_P0057557 Mcm8 protein_coding protein_coding MGP_NODShiLtJ_T0057558.1 MGP_NODShiLtJ_G0026364.1 mouse_genomes_project 2 149588697 149590499 + Mcm8 protein_coding processed_transcript MGP_NODShiLtJ_T0058294.1 MGP_NODShiLtJ_G0026563.1 mouse_genomes_project 2 175317852 175361432 + MGP_NODShiLtJ_P0058294 Mmp24 protein_coding protein_coding MGP_NODShiLtJ_T0058295.1 MGP_NODShiLtJ_G0026563.1 mouse_genomes_project 2 175350185 175353443 + Mmp24 protein_coding retained_intron MGP_NODShiLtJ_T0004102.1 MGP_NODShiLtJ_G0003621.1 mouse_genomes_project 2 183913861 183924746 - Gm16316 antisense antisense MGP_NODShiLtJ_T0003828.1 MGP_NODShiLtJ_G0003422.1 mouse_genomes_project 2 753052 755244 - Gm13185 antisense antisense MGP_NODShiLtJ_T0055847.1 MGP_NODShiLtJ_G0025980.1 mouse_genomes_project 2 102641647 102643125 + MGP_NODShiLtJ_P0055847 Harbi1 protein_coding protein_coding MGP_NODShiLtJ_T0055848.1 MGP_NODShiLtJ_G0025980.1 mouse_genomes_project 2 102641648 102643523 + MGP_NODShiLtJ_P0055848 Harbi1 protein_coding protein_coding MGP_NODShiLtJ_T0055849.1 MGP_NODShiLtJ_G0025980.1 mouse_genomes_project 2 102641712 102646237 + MGP_NODShiLtJ_P0055849 Harbi1 protein_coding protein_coding MGP_NODShiLtJ_T0055850.1 MGP_NODShiLtJ_G0025980.1 mouse_genomes_project 2 102641717 102653622 + MGP_NODShiLtJ_P0055850 Harbi1 protein_coding protein_coding MGP_NODShiLtJ_T0055851.1 MGP_NODShiLtJ_G0025980.1 mouse_genomes_project 2 102642992 102651364 + MGP_NODShiLtJ_P0055851 Harbi1 protein_coding protein_coding MGP_NODShiLtJ_T0001071.1 MGP_NODShiLtJ_G0000996.1 mouse_genomes_project 2 145681760 145682800 - TEC TEC MGP_NODShiLtJ_T0056393.1 MGP_NODShiLtJ_G0026114.1 mouse_genomes_project 2 128692556 128744086 - MGP_NODShiLtJ_P0056393 Scg5 protein_coding protein_coding MGP_NODShiLtJ_T0056394.1 MGP_NODShiLtJ_G0026114.1 mouse_genomes_project 2 128742304 128743727 - Scg5 protein_coding processed_transcript MGP_NODShiLtJ_T0007137.1 MGP_NODShiLtJ_G0005844.1 mouse_genomes_project 2 48393403 48398228 - Gm13467 lincRNA lincRNA MGP_NODShiLtJ_T0052661.1 MGP_NODShiLtJ_G0025254.1 mouse_genomes_project 2 24590733 24591715 - MGP_NODShiLtJ_P0052661 Mrpl41 protein_coding protein_coding MGP_NODShiLtJ_T0052662.1 MGP_NODShiLtJ_G0025254.1 mouse_genomes_project 2 24591111 24591606 - MGP_NODShiLtJ_P0052662 Mrpl41 protein_coding protein_coding MGP_NODShiLtJ_T0011378.1 MGP_NODShiLtJ_G0009511.1 mouse_genomes_project 2 19593736 19593825 + Gm27446 misc_RNA misc_RNA MGP_NODShiLtJ_T0052899.1 MGP_NODShiLtJ_G0025294.1 mouse_genomes_project 2 25248519 25250314 - MGP_NODShiLtJ_P0052899 Phpt1 protein_coding protein_coding MGP_NODShiLtJ_T0052900.1 MGP_NODShiLtJ_G0025294.1 mouse_genomes_project 2 25248591 25249968 - Phpt1 protein_coding processed_transcript MGP_NODShiLtJ_T0007300.1 MGP_NODShiLtJ_G0005977.1 mouse_genomes_project 2 170172741 170362284 + lincRNA lincRNA MGP_NODShiLtJ_T0058181.1 MGP_NODShiLtJ_G0026541.1 mouse_genomes_project 2 174037680 174038181 - MGP_NODShiLtJ_P0058181 4930519P11Rik protein_coding protein_coding MGP_NODShiLtJ_T0007350.1 MGP_NODShiLtJ_G0006019.1 mouse_genomes_project 2 189095933 189102102 - Gm14262 lincRNA lincRNA MGP_NODShiLtJ_T0053685.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31860457 31870288 + Abl1 protein_coding retained_intron MGP_NODShiLtJ_T0053686.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31860618 31880655 + Abl1 protein_coding processed_transcript MGP_NODShiLtJ_T0053687.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31860632 31990812 + MGP_NODShiLtJ_P0053687 Abl1 protein_coding protein_coding MGP_NODShiLtJ_T0053688.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31860633 31987610 + MGP_NODShiLtJ_P0053688 Abl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053689.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31861546 31965653 + MGP_NODShiLtJ_P0053689 Abl1 protein_coding protein_coding MGP_NODShiLtJ_T0053690.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31861692 31966285 + MGP_NODShiLtJ_P0053690 Abl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053691.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31947200 31991498 + MGP_NODShiLtJ_P0053691 Abl1 protein_coding protein_coding MGP_NODShiLtJ_T0053692.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31947430 31966285 + MGP_NODShiLtJ_P0053692 Abl1 protein_coding protein_coding MGP_NODShiLtJ_T0053693.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31977435 31981833 + Abl1 protein_coding retained_intron MGP_NODShiLtJ_T0053694.1 MGP_NODShiLtJ_G0025427.1 mouse_genomes_project 2 31983916 31985263 + Abl1 protein_coding retained_intron MGP_NODShiLtJ_T0058325.1 MGP_NODShiLtJ_G0026569.1 mouse_genomes_project 2 175493944 175498312 - MGP_NODShiLtJ_P0058325 Gdf5 protein_coding protein_coding MGP_NODShiLtJ_T0007312.1 MGP_NODShiLtJ_G0005987.1 mouse_genomes_project 2 176202680 176203720 - Gm14174 lincRNA lincRNA MGP_NODShiLtJ_T0010374.1 MGP_NODShiLtJ_G0008507.1 mouse_genomes_project 2 180571657 180571783 + Gm23968 miRNA miRNA MGP_NODShiLtJ_T0098193.1 MGP_NODShiLtJ_G0036605.1 mouse_genomes_project 2 176596825 176596961 - Gm27653 scaRNA scaRNA MGP_NODShiLtJ_T0059649.1 MGP_NODShiLtJ_G0026851.1 mouse_genomes_project 2 203331684 203333346 - MGP_NODShiLtJ_P0059649 Lkaaear1 protein_coding protein_coding MGP_NODShiLtJ_T0059650.1 MGP_NODShiLtJ_G0026851.1 mouse_genomes_project 2 203331687 203332308 - MGP_NODShiLtJ_P0059650 Lkaaear1 protein_coding protein_coding MGP_NODShiLtJ_T0055494.1 MGP_NODShiLtJ_G0025829.1 mouse_genomes_project 2 96781280 96782219 - MGP_NODShiLtJ_P0055494 Olfr1111 protein_coding protein_coding MGP_NODShiLtJ_T0056323.1 MGP_NODShiLtJ_G0026074.1 mouse_genomes_project 2 125781929 125782841 - MGP_NODShiLtJ_P0056323 Olfr1277 protein_coding protein_coding MGP_NODShiLtJ_T0058956.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185677957 185679243 - Slc35c2 protein_coding retained_intron MGP_NODShiLtJ_T0058957.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185677957 185689115 - MGP_NODShiLtJ_P0058957 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058958.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185677957 185689187 - MGP_NODShiLtJ_P0058958 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058959.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185677957 185689115 - MGP_NODShiLtJ_P0058959 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058960.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185677957 185689229 - MGP_NODShiLtJ_P0058960 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058961.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185677957 185689184 - MGP_NODShiLtJ_P0058961 Slc35c2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058962.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185678855 185683583 - Slc35c2 protein_coding retained_intron MGP_NODShiLtJ_T0058963.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185679755 185684728 - MGP_NODShiLtJ_P0058963 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058964.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185679791 185684960 - MGP_NODShiLtJ_P0058964 Slc35c2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058965.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185682022 185684960 - MGP_NODShiLtJ_P0058965 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058966.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185682191 185689195 - MGP_NODShiLtJ_P0058966 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058967.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185682191 185689196 - MGP_NODShiLtJ_P0058967 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058968.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185682279 185687912 - MGP_NODShiLtJ_P0058968 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058969.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185682284 185689187 - MGP_NODShiLtJ_P0058969 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0058970.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185682954 185689198 - Slc35c2 protein_coding retained_intron MGP_NODShiLtJ_T0058971.1 MGP_NODShiLtJ_G0026707.1 mouse_genomes_project 2 185684238 185689132 - MGP_NODShiLtJ_P0058971 Slc35c2 protein_coding protein_coding MGP_NODShiLtJ_T0013747.1 MGP_NODShiLtJ_G0011855.1 mouse_genomes_project 2 187743992 187744190 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053073.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26327498 26336830 + MGP_NODShiLtJ_P0053073 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053074.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26328540 26340130 + MGP_NODShiLtJ_P0053074 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053075.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26331347 26340127 + MGP_NODShiLtJ_P0053075 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053076.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26331363 26340128 + MGP_NODShiLtJ_P0053076 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053077.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26331388 26340566 + MGP_NODShiLtJ_P0053077 Egfl7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053078.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26334074 26340127 + MGP_NODShiLtJ_P0053078 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053080.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26334105 26338354 + Egfl7 protein_coding processed_transcript MGP_NODShiLtJ_T0053081.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26334116 26338385 + MGP_NODShiLtJ_P0053081 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053082.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26334133 26337935 + MGP_NODShiLtJ_P0053082 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053083.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26335988 26339889 + MGP_NODShiLtJ_P0053083 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053084.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26336780 26339009 + Egfl7 protein_coding retained_intron MGP_NODShiLtJ_T0053085.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26337965 26338418 + Egfl7 protein_coding retained_intron MGP_NODShiLtJ_T0053086.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26338410 26340122 + MGP_NODShiLtJ_P0053086 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053087.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26338474 26340128 + MGP_NODShiLtJ_P0053087 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053088.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26338879 26340128 + MGP_NODShiLtJ_P0053088 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053089.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26338880 26340128 + MGP_NODShiLtJ_P0053089 Egfl7 protein_coding protein_coding MGP_NODShiLtJ_T0053090.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26338891 26339736 + Egfl7 protein_coding retained_intron MGP_NODShiLtJ_T0053091.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26339468 26340127 + Egfl7 protein_coding processed_transcript MGP_NODShiLtJ_T0053092.1 MGP_NODShiLtJ_G0025329.1 mouse_genomes_project 2 26339592 26340128 + Egfl7 protein_coding retained_intron MGP_NODShiLtJ_T0007339.1 MGP_NODShiLtJ_G0006011.1 mouse_genomes_project 2 187749228 187752261 - lincRNA lincRNA MGP_NODShiLtJ_T0007340.1 MGP_NODShiLtJ_G0006011.1 mouse_genomes_project 2 187750119 187751605 - lincRNA lincRNA MGP_NODShiLtJ_T0099126.1 MGP_NODShiLtJ_G0037520.1 mouse_genomes_project 2 133535315 133535473 - Gm25308 snRNA snRNA MGP_NODShiLtJ_T0007238.1 MGP_NODShiLtJ_G0005929.1 mouse_genomes_project 2 130506687 130509271 + Gm13976 lincRNA lincRNA MGP_NODShiLtJ_T0054496.1 MGP_NODShiLtJ_G0025577.1 mouse_genomes_project 2 58621420 59485666 + MGP_NODShiLtJ_P0054496 protein_coding protein_coding MGP_NODShiLtJ_T0054497.1 MGP_NODShiLtJ_G0025577.1 mouse_genomes_project 2 58621490 59485666 + MGP_NODShiLtJ_P0054497 protein_coding protein_coding MGP_NODShiLtJ_T0054498.1 MGP_NODShiLtJ_G0025577.1 mouse_genomes_project 2 58621490 59485666 + MGP_NODShiLtJ_P0054498 protein_coding protein_coding MGP_NODShiLtJ_T0054499.1 MGP_NODShiLtJ_G0025577.1 mouse_genomes_project 2 58621594 58988856 + MGP_NODShiLtJ_P0054499 protein_coding protein_coding MGP_NODShiLtJ_T0054500.1 MGP_NODShiLtJ_G0025577.1 mouse_genomes_project 2 58754547 59477899 + MGP_NODShiLtJ_P0054500 protein_coding protein_coding MGP_NODShiLtJ_T0003983.1 MGP_NODShiLtJ_G0003536.1 mouse_genomes_project 2 115123746 115153043 + Gm13919 antisense antisense MGP_NODShiLtJ_T0003984.1 MGP_NODShiLtJ_G0003536.1 mouse_genomes_project 2 115123754 115126379 + Gm13919 antisense antisense MGP_NODShiLtJ_T0056550.1 MGP_NODShiLtJ_G0026150.1 mouse_genomes_project 2 134706998 134744160 - MGP_NODShiLtJ_P0056550 Dnajc17 protein_coding protein_coding MGP_NODShiLtJ_T0056551.1 MGP_NODShiLtJ_G0026150.1 mouse_genomes_project 2 134707064 134721053 - MGP_NODShiLtJ_P0056551 Dnajc17 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056553.1 MGP_NODShiLtJ_G0026150.1 mouse_genomes_project 2 134713920 134718153 - Dnajc17 protein_coding processed_transcript MGP_NODShiLtJ_T0056554.1 MGP_NODShiLtJ_G0026150.1 mouse_genomes_project 2 134718190 134744147 - Dnajc17 protein_coding retained_intron MGP_NODShiLtJ_T0013368.1 MGP_NODShiLtJ_G0011476.1 mouse_genomes_project 2 34801772 34802132 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055395.1 MGP_NODShiLtJ_G0025753.1 mouse_genomes_project 2 93820874 93826408 + Prg3 protein_coding processed_transcript MGP_NODShiLtJ_T0055396.1 MGP_NODShiLtJ_G0025753.1 mouse_genomes_project 2 93820874 93826507 + MGP_NODShiLtJ_P0055396 Prg3 protein_coding protein_coding MGP_NODShiLtJ_T0099144.1 MGP_NODShiLtJ_G0037538.1 mouse_genomes_project 2 183730856 183730959 + Gm25881 snRNA snRNA MGP_NODShiLtJ_T0013656.1 MGP_NODShiLtJ_G0011764.1 mouse_genomes_project 2 149767214 149768214 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013562.1 MGP_NODShiLtJ_G0011670.1 mouse_genomes_project 2 110034923 110035412 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013370.1 MGP_NODShiLtJ_G0011478.1 mouse_genomes_project 2 35410393 35410560 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056252.1 MGP_NODShiLtJ_G0026054.1 mouse_genomes_project 2 119077394 119322251 - MGP_NODShiLtJ_P0056252 Elp4 protein_coding protein_coding MGP_NODShiLtJ_T0056253.1 MGP_NODShiLtJ_G0026054.1 mouse_genomes_project 2 119110669 119268573 - MGP_NODShiLtJ_P0056253 Elp4 protein_coding protein_coding MGP_NODShiLtJ_T0056254.1 MGP_NODShiLtJ_G0026054.1 mouse_genomes_project 2 119179045 119207370 - Elp4 protein_coding retained_intron MGP_NODShiLtJ_T0056255.1 MGP_NODShiLtJ_G0026054.1 mouse_genomes_project 2 119268660 119322170 - Elp4 protein_coding processed_transcript MGP_NODShiLtJ_T0059368.1 MGP_NODShiLtJ_G0026801.1 mouse_genomes_project 2 201570721 201585980 + MGP_NODShiLtJ_P0059368 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059369.1 MGP_NODShiLtJ_G0026801.1 mouse_genomes_project 2 201570736 201586101 + protein_coding retained_intron MGP_NODShiLtJ_T0059370.1 MGP_NODShiLtJ_G0026801.1 mouse_genomes_project 2 201570740 201580805 + protein_coding retained_intron MGP_NODShiLtJ_T0059371.1 MGP_NODShiLtJ_G0026801.1 mouse_genomes_project 2 201570740 201586108 + MGP_NODShiLtJ_P0059371 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059372.1 MGP_NODShiLtJ_G0026801.1 mouse_genomes_project 2 201578819 201583082 + protein_coding retained_intron MGP_NODShiLtJ_T0059373.1 MGP_NODShiLtJ_G0026801.1 mouse_genomes_project 2 201583196 201586106 + protein_coding retained_intron MGP_NODShiLtJ_T0057904.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170567854 170587212 + MGP_NODShiLtJ_P0057904 Nsfl1c protein_coding protein_coding MGP_NODShiLtJ_T0057905.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170567861 170583392 + Nsfl1c protein_coding retained_intron MGP_NODShiLtJ_T0057906.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170567962 170577521 + Nsfl1c protein_coding retained_intron MGP_NODShiLtJ_T0057907.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170567965 170587213 + MGP_NODShiLtJ_P0057907 Nsfl1c protein_coding protein_coding MGP_NODShiLtJ_T0057908.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170567976 170588454 + MGP_NODShiLtJ_P0057908 Nsfl1c protein_coding protein_coding MGP_NODShiLtJ_T0057909.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170567983 170579707 + Nsfl1c protein_coding retained_intron MGP_NODShiLtJ_T0057910.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170578610 170585705 + Nsfl1c protein_coding processed_transcript MGP_NODShiLtJ_T0057911.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170579263 170586998 + Nsfl1c protein_coding retained_intron MGP_NODShiLtJ_T0057912.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170580020 170585735 + Nsfl1c protein_coding retained_intron MGP_NODShiLtJ_T0057913.1 MGP_NODShiLtJ_G0026458.1 mouse_genomes_project 2 170585146 170588302 + Nsfl1c protein_coding retained_intron MGP_NODShiLtJ_T0053840.1 MGP_NODShiLtJ_G0025448.1 mouse_genomes_project 2 32836198 32838908 + MGP_NODShiLtJ_P0053840 Dpm2 protein_coding protein_coding MGP_NODShiLtJ_T0053841.1 MGP_NODShiLtJ_G0025448.1 mouse_genomes_project 2 32836198 32838892 + MGP_NODShiLtJ_P0053841 Dpm2 protein_coding protein_coding MGP_NODShiLtJ_T0053842.1 MGP_NODShiLtJ_G0025448.1 mouse_genomes_project 2 32836207 32838410 + Dpm2 protein_coding retained_intron MGP_NODShiLtJ_T0053843.1 MGP_NODShiLtJ_G0025448.1 mouse_genomes_project 2 32837375 32838785 + Dpm2 protein_coding retained_intron MGP_NODShiLtJ_T0003859.1 MGP_NODShiLtJ_G0003447.1 mouse_genomes_project 2 20426374 20456342 - Gm13327 antisense antisense MGP_NODShiLtJ_T0058806.1 MGP_NODShiLtJ_G0026663.1 mouse_genomes_project 2 184553372 184555793 - MGP_NODShiLtJ_P0058806 Svs4 protein_coding protein_coding MGP_NODShiLtJ_T0013726.1 MGP_NODShiLtJ_G0011834.1 mouse_genomes_project 2 176826467 176826827 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004012.1 MGP_NODShiLtJ_G0003552.1 mouse_genomes_project 2 134247071 134250114 + Inafm2 antisense antisense MGP_NODShiLtJ_T0054530.1 MGP_NODShiLtJ_G0025585.1 mouse_genomes_project 2 63608927 63761663 - Acvr1 protein_coding processed_transcript MGP_NODShiLtJ_T0054531.1 MGP_NODShiLtJ_G0025585.1 mouse_genomes_project 2 63675137 63773747 - MGP_NODShiLtJ_P0054531 Acvr1 protein_coding protein_coding MGP_NODShiLtJ_T0054532.1 MGP_NODShiLtJ_G0025585.1 mouse_genomes_project 2 63675146 63812223 - MGP_NODShiLtJ_P0054532 Acvr1 protein_coding protein_coding MGP_NODShiLtJ_T0054534.1 MGP_NODShiLtJ_G0025585.1 mouse_genomes_project 2 63712186 63783894 - MGP_NODShiLtJ_P0054534 Acvr1 protein_coding protein_coding MGP_NODShiLtJ_T0013509.1 MGP_NODShiLtJ_G0011617.1 mouse_genomes_project 2 88819204 88819819 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057464.1 MGP_NODShiLtJ_G0026346.1 mouse_genomes_project 2 147908870 147929789 + Pank2 protein_coding processed_transcript MGP_NODShiLtJ_T0057465.1 MGP_NODShiLtJ_G0026346.1 mouse_genomes_project 2 147908875 147953664 + MGP_NODShiLtJ_P0057465 Pank2 protein_coding protein_coding MGP_NODShiLtJ_T0057466.1 MGP_NODShiLtJ_G0026346.1 mouse_genomes_project 2 147908900 147944539 + MGP_NODShiLtJ_P0057466 Pank2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057467.1 MGP_NODShiLtJ_G0026346.1 mouse_genomes_project 2 147908943 147953662 + MGP_NODShiLtJ_P0057467 Pank2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057468.1 MGP_NODShiLtJ_G0026346.1 mouse_genomes_project 2 147909171 147944382 + MGP_NODShiLtJ_P0057468 Pank2 protein_coding protein_coding MGP_NODShiLtJ_T0057469.1 MGP_NODShiLtJ_G0026346.1 mouse_genomes_project 2 147909214 147944742 + Pank2 protein_coding processed_transcript MGP_NODShiLtJ_T0057470.1 MGP_NODShiLtJ_G0026346.1 mouse_genomes_project 2 147920430 147940474 + MGP_NODShiLtJ_P0057470 Pank2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057471.1 MGP_NODShiLtJ_G0026346.1 mouse_genomes_project 2 147920538 147944359 + MGP_NODShiLtJ_P0057471 Pank2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055509.1 MGP_NODShiLtJ_G0025841.1 mouse_genomes_project 2 97329765 97332434 + Pramel6 protein_coding processed_transcript MGP_NODShiLtJ_T0055510.1 MGP_NODShiLtJ_G0025841.1 mouse_genomes_project 2 97329765 97332425 + Pramel6 protein_coding processed_transcript MGP_NODShiLtJ_T0055511.1 MGP_NODShiLtJ_G0025841.1 mouse_genomes_project 2 97329783 97332605 + Pramel6 protein_coding processed_transcript MGP_NODShiLtJ_T0055512.1 MGP_NODShiLtJ_G0025841.1 mouse_genomes_project 2 97330627 97332518 + Pramel6 protein_coding processed_transcript MGP_NODShiLtJ_T0055513.1 MGP_NODShiLtJ_G0025841.1 mouse_genomes_project 2 97330627 97334078 + MGP_NODShiLtJ_P0055513 Pramel6 protein_coding protein_coding MGP_NODShiLtJ_T0055514.1 MGP_NODShiLtJ_G0025841.1 mouse_genomes_project 2 97331660 97334071 + MGP_NODShiLtJ_P0055514 Pramel6 protein_coding protein_coding MGP_NODShiLtJ_T0013333.1 MGP_NODShiLtJ_G0011441.1 mouse_genomes_project 2 18424400 18424628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007067.1 MGP_NODShiLtJ_G0005792.1 mouse_genomes_project 2 2257641 2364788 - Gm26776 lincRNA lincRNA MGP_NODShiLtJ_T0101849.1 MGP_NODShiLtJ_G0040017.1 mouse_genomes_project 2 195112375 195168895 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059274.1 MGP_NODShiLtJ_G0026776.1 mouse_genomes_project 2 194873283 194882912 - MGP_NODShiLtJ_P0059274 Ankrd60 protein_coding protein_coding MGP_NODShiLtJ_T0059275.1 MGP_NODShiLtJ_G0026776.1 mouse_genomes_project 2 194873321 194882813 - MGP_NODShiLtJ_P0059275 Ankrd60 protein_coding protein_coding MGP_NODShiLtJ_T0059276.1 MGP_NODShiLtJ_G0026776.1 mouse_genomes_project 2 194877002 194882888 - Ankrd60 protein_coding processed_transcript MGP_NODShiLtJ_T0054518.1 MGP_NODShiLtJ_G0025583.1 mouse_genomes_project 2 63332739 63365320 - MGP_NODShiLtJ_P0054518 Cytip protein_coding protein_coding MGP_NODShiLtJ_T0054519.1 MGP_NODShiLtJ_G0025583.1 mouse_genomes_project 2 63337494 63401719 - Cytip protein_coding processed_transcript MGP_NODShiLtJ_T0054520.1 MGP_NODShiLtJ_G0025583.1 mouse_genomes_project 2 63337579 63401729 - Cytip protein_coding processed_transcript MGP_NODShiLtJ_T0054521.1 MGP_NODShiLtJ_G0025583.1 mouse_genomes_project 2 63337711 63361611 - Cytip protein_coding processed_transcript MGP_NODShiLtJ_T0054522.1 MGP_NODShiLtJ_G0025583.1 mouse_genomes_project 2 63351409 63364946 - Cytip protein_coding processed_transcript MGP_NODShiLtJ_T0054523.1 MGP_NODShiLtJ_G0025583.1 mouse_genomes_project 2 63351584 63401730 - Cytip protein_coding processed_transcript MGP_NODShiLtJ_T0054524.1 MGP_NODShiLtJ_G0025583.1 mouse_genomes_project 2 63364802 63401734 - Cytip protein_coding processed_transcript MGP_NODShiLtJ_T0054525.1 MGP_NODShiLtJ_G0025583.1 mouse_genomes_project 2 63364863 63365482 - Cytip protein_coding processed_transcript MGP_NODShiLtJ_T0010283.1 MGP_NODShiLtJ_G0008416.1 mouse_genomes_project 2 26338802 26338875 + Mir126a miRNA miRNA MGP_NODShiLtJ_T0054495.1 MGP_NODShiLtJ_G0025576.1 mouse_genomes_project 2 58171216 58172676 - MGP_NODShiLtJ_P0054495 Rprm protein_coding protein_coding MGP_NODShiLtJ_T0010280.1 MGP_NODShiLtJ_G0008413.1 mouse_genomes_project 2 24691177 24691240 + Mir7664 miRNA miRNA MGP_NODShiLtJ_T0010360.1 MGP_NODShiLtJ_G0008493.1 mouse_genomes_project 2 162967410 162967501 - Gm24823 miRNA miRNA MGP_NODShiLtJ_T0100414.1 MGP_NODShiLtJ_G0038808.1 mouse_genomes_project 2 177444366 177444500 - Gm25407 snoRNA snoRNA MGP_NODShiLtJ_T0004117.1 MGP_NODShiLtJ_G0003632.1 mouse_genomes_project 2 188396623 188403760 + Gm14320 antisense antisense MGP_NODShiLtJ_T0055491.1 MGP_NODShiLtJ_G0025826.1 mouse_genomes_project 2 96701871 96702810 - MGP_NODShiLtJ_P0055491 Olfr1109 protein_coding protein_coding MGP_NODShiLtJ_T0001047.1 MGP_NODShiLtJ_G0000973.1 mouse_genomes_project 2 38808337 38815129 + TEC TEC MGP_NODShiLtJ_T0056975.1 MGP_NODShiLtJ_G0026230.1 mouse_genomes_project 2 138144444 138178492 + MGP_NODShiLtJ_P0056975 Duox1 protein_coding protein_coding MGP_NODShiLtJ_T0057338.1 MGP_NODShiLtJ_G0026319.1 mouse_genomes_project 2 146961888 146962700 + MGP_NODShiLtJ_P0057338 1700020A23Rik protein_coding protein_coding MGP_NODShiLtJ_T0057339.1 MGP_NODShiLtJ_G0026319.1 mouse_genomes_project 2 146961894 146962648 + MGP_NODShiLtJ_P0057339 1700020A23Rik protein_coding protein_coding MGP_NODShiLtJ_T0057340.1 MGP_NODShiLtJ_G0026319.1 mouse_genomes_project 2 146961915 146962704 + MGP_NODShiLtJ_P0057340 1700020A23Rik protein_coding protein_coding MGP_NODShiLtJ_T0054928.1 MGP_NODShiLtJ_G0025654.1 mouse_genomes_project 2 78041876 78069537 + MGP_NODShiLtJ_P0054928 Cybrd1 protein_coding protein_coding MGP_NODShiLtJ_T0057148.1 MGP_NODShiLtJ_G0026269.1 mouse_genomes_project 2 143601681 143616008 + Snrnp200 protein_coding retained_intron MGP_NODShiLtJ_T0057149.1 MGP_NODShiLtJ_G0026269.1 mouse_genomes_project 2 143601694 143634370 + MGP_NODShiLtJ_P0057149 Snrnp200 protein_coding protein_coding MGP_NODShiLtJ_T0057150.1 MGP_NODShiLtJ_G0026269.1 mouse_genomes_project 2 143614985 143618447 + Snrnp200 protein_coding processed_transcript MGP_NODShiLtJ_T0057151.1 MGP_NODShiLtJ_G0026269.1 mouse_genomes_project 2 143630098 143632220 + Snrnp200 protein_coding retained_intron MGP_NODShiLtJ_T0057152.1 MGP_NODShiLtJ_G0026269.1 mouse_genomes_project 2 143631985 143633879 + Snrnp200 protein_coding retained_intron MGP_NODShiLtJ_T0054837.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76507608 76508854 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0054838.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76507868 76563719 + MGP_NODShiLtJ_P0054838 Ppig protein_coding protein_coding MGP_NODShiLtJ_T0054839.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76507917 76531900 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0054840.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76507966 76530934 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0054841.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76508156 76563719 + MGP_NODShiLtJ_P0054841 Ppig protein_coding protein_coding MGP_NODShiLtJ_T0054842.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76508389 76534716 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0054843.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76527822 76534419 + MGP_NODShiLtJ_P0054843 Ppig protein_coding protein_coding MGP_NODShiLtJ_T0054844.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76530353 76551448 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0054845.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76530601 76531653 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0054846.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76530770 76531670 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0054847.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76534284 76551534 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0054848.1 MGP_NODShiLtJ_G0025638.1 mouse_genomes_project 2 76551589 76559263 + Ppig protein_coding processed_transcript MGP_NODShiLtJ_T0057984.1 MGP_NODShiLtJ_G0026478.1 mouse_genomes_project 2 171553328 171557928 - MGP_NODShiLtJ_P0057984 Zcchc3 protein_coding protein_coding MGP_NODShiLtJ_T0003974.1 MGP_NODShiLtJ_G0003529.1 mouse_genomes_project 2 88242938 88248574 + Gm13752 antisense antisense MGP_NODShiLtJ_T0055266.1 MGP_NODShiLtJ_G0025724.1 mouse_genomes_project 2 88516278 88559412 + protein_coding retained_intron MGP_NODShiLtJ_T0055268.1 MGP_NODShiLtJ_G0025724.1 mouse_genomes_project 2 88538828 88559408 + MGP_NODShiLtJ_P0055268 protein_coding protein_coding MGP_NODShiLtJ_T0055269.1 MGP_NODShiLtJ_G0025724.1 mouse_genomes_project 2 88538844 88556493 + MGP_NODShiLtJ_P0055269 protein_coding protein_coding MGP_NODShiLtJ_T0055270.1 MGP_NODShiLtJ_G0025724.1 mouse_genomes_project 2 88539276 88546488 + protein_coding processed_transcript MGP_NODShiLtJ_T0055271.1 MGP_NODShiLtJ_G0025724.1 mouse_genomes_project 2 88544221 88553901 + protein_coding processed_transcript MGP_NODShiLtJ_T0054293.1 MGP_NODShiLtJ_G0025546.1 mouse_genomes_project 2 39889726 39901273 + Arpc5l protein_coding processed_transcript MGP_NODShiLtJ_T0054294.1 MGP_NODShiLtJ_G0025546.1 mouse_genomes_project 2 39892454 39901824 + MGP_NODShiLtJ_P0054294 Arpc5l protein_coding protein_coding MGP_NODShiLtJ_T0054295.1 MGP_NODShiLtJ_G0025546.1 mouse_genomes_project 2 39892519 39899846 + Arpc5l protein_coding processed_transcript MGP_NODShiLtJ_T0054296.1 MGP_NODShiLtJ_G0025546.1 mouse_genomes_project 2 39892535 39901340 + MGP_NODShiLtJ_P0054296 Arpc5l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054297.1 MGP_NODShiLtJ_G0025546.1 mouse_genomes_project 2 39894396 39901824 + Arpc5l protein_coding processed_transcript MGP_NODShiLtJ_T0052082.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2080957 2104572 - MGP_NODShiLtJ_P0052082 Mcm10 protein_coding protein_coding MGP_NODShiLtJ_T0052083.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2081967 2088531 - Mcm10 protein_coding retained_intron MGP_NODShiLtJ_T0052084.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2081967 2094188 - Mcm10 protein_coding retained_intron MGP_NODShiLtJ_T0052085.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2081967 2105024 - MGP_NODShiLtJ_P0052085 Mcm10 protein_coding protein_coding MGP_NODShiLtJ_T0052086.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2082274 2085894 - Mcm10 protein_coding retained_intron MGP_NODShiLtJ_T0052087.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2082503 2087475 - Mcm10 protein_coding retained_intron MGP_NODShiLtJ_T0052088.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2091650 2097729 - Mcm10 protein_coding retained_intron MGP_NODShiLtJ_T0052089.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2096671 2097949 - Mcm10 protein_coding retained_intron MGP_NODShiLtJ_T0052090.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2099140 2104986 - Mcm10 protein_coding processed_transcript MGP_NODShiLtJ_T0052091.1 MGP_NODShiLtJ_G0025157.1 mouse_genomes_project 2 2099627 2104948 - Mcm10 protein_coding retained_intron MGP_NODShiLtJ_T0059432.1 MGP_NODShiLtJ_G0026815.1 mouse_genomes_project 2 202156463 202177042 - MGP_NODShiLtJ_P0059432 Tcfl5 protein_coding protein_coding MGP_NODShiLtJ_T0059433.1 MGP_NODShiLtJ_G0026815.1 mouse_genomes_project 2 202157099 202176665 - MGP_NODShiLtJ_P0059433 Tcfl5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059434.1 MGP_NODShiLtJ_G0026815.1 mouse_genomes_project 2 202169699 202177037 - MGP_NODShiLtJ_P0059434 Tcfl5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059435.1 MGP_NODShiLtJ_G0026815.1 mouse_genomes_project 2 202171911 202176795 - Tcfl5 protein_coding retained_intron MGP_NODShiLtJ_T0057679.1 MGP_NODShiLtJ_G0026393.1 mouse_genomes_project 2 161797218 162081919 + MGP_NODShiLtJ_P0057679 Pcsk2 protein_coding protein_coding MGP_NODShiLtJ_T0057680.1 MGP_NODShiLtJ_G0026393.1 mouse_genomes_project 2 161797333 161829636 + Pcsk2 protein_coding processed_transcript MGP_NODShiLtJ_T0055538.1 MGP_NODShiLtJ_G0025863.1 mouse_genomes_project 2 97963809 97964782 - MGP_NODShiLtJ_P0055538 Olfr1156 protein_coding protein_coding MGP_NODShiLtJ_T0059140.1 MGP_NODShiLtJ_G0026740.1 mouse_genomes_project 2 188981146 189007702 - MGP_NODShiLtJ_P0059140 Adnp protein_coding protein_coding MGP_NODShiLtJ_T0059141.1 MGP_NODShiLtJ_G0026740.1 mouse_genomes_project 2 188981146 189007892 - MGP_NODShiLtJ_P0059141 Adnp protein_coding protein_coding MGP_NODShiLtJ_T0059143.1 MGP_NODShiLtJ_G0026740.1 mouse_genomes_project 2 188985128 189007489 - Adnp protein_coding processed_transcript MGP_NODShiLtJ_T0059144.1 MGP_NODShiLtJ_G0026740.1 mouse_genomes_project 2 189005136 189007489 - Adnp protein_coding retained_intron MGP_NODShiLtJ_T0101799.1 MGP_NODShiLtJ_G0039967.1 mouse_genomes_project 2 94272248 94273135 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0056576.1 MGP_NODShiLtJ_G0026157.1 mouse_genomes_project 2 134870342 134883065 + MGP_NODShiLtJ_P0056576 Dll4 protein_coding protein_coding MGP_NODShiLtJ_T0056577.1 MGP_NODShiLtJ_G0026157.1 mouse_genomes_project 2 134874615 134878372 + Dll4 protein_coding processed_transcript MGP_NODShiLtJ_T0007285.1 MGP_NODShiLtJ_G0005966.1 mouse_genomes_project 2 162471172 162489298 - lincRNA lincRNA MGP_NODShiLtJ_T0007286.1 MGP_NODShiLtJ_G0005966.1 mouse_genomes_project 2 162472337 162479108 - lincRNA lincRNA MGP_NODShiLtJ_T0013723.1 MGP_NODShiLtJ_G0011831.1 mouse_genomes_project 2 176502553 176503097 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058289.1 MGP_NODShiLtJ_G0026561.1 mouse_genomes_project 2 175270156 175270213 - MGP_NODShiLtJ_P0058289 Gm17581 protein_coding protein_coding MGP_NODShiLtJ_T0100366.1 MGP_NODShiLtJ_G0038760.1 mouse_genomes_project 2 57711303 57711412 - Gm23315 snoRNA snoRNA MGP_NODShiLtJ_T0100359.1 MGP_NODShiLtJ_G0038753.1 mouse_genomes_project 2 38117699 38117810 - Snord90 snoRNA snoRNA MGP_NODShiLtJ_T0057550.1 MGP_NODShiLtJ_G0026363.1 mouse_genomes_project 2 149576697 149583110 - Trmt6 protein_coding retained_intron MGP_NODShiLtJ_T0057551.1 MGP_NODShiLtJ_G0026363.1 mouse_genomes_project 2 149576697 149588529 - Trmt6 protein_coding processed_transcript MGP_NODShiLtJ_T0057552.1 MGP_NODShiLtJ_G0026363.1 mouse_genomes_project 2 149576697 149588528 - MGP_NODShiLtJ_P0057552 Trmt6 protein_coding protein_coding MGP_NODShiLtJ_T0057553.1 MGP_NODShiLtJ_G0026363.1 mouse_genomes_project 2 149582891 149588232 - Trmt6 protein_coding processed_transcript MGP_NODShiLtJ_T0057554.1 MGP_NODShiLtJ_G0026363.1 mouse_genomes_project 2 149582916 149584982 - Trmt6 protein_coding processed_transcript MGP_NODShiLtJ_T0057555.1 MGP_NODShiLtJ_G0026363.1 mouse_genomes_project 2 149584241 149588487 - Trmt6 protein_coding processed_transcript MGP_NODShiLtJ_T0010331.1 MGP_NODShiLtJ_G0008464.1 mouse_genomes_project 2 103598584 103598659 + Mir7222 miRNA miRNA MGP_NODShiLtJ_T0010273.1 MGP_NODShiLtJ_G0008406.1 mouse_genomes_project 2 16235721 16235834 + Mir6419 miRNA miRNA MGP_NODShiLtJ_T0052770.1 MGP_NODShiLtJ_G0025275.1 mouse_genomes_project 2 24930412 24931678 + MGP_NODShiLtJ_P0052770 Lrrc26 protein_coding protein_coding MGP_NODShiLtJ_T0101784.1 MGP_NODShiLtJ_G0039952.1 mouse_genomes_project 2 20111002 20213130 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0057107.1 MGP_NODShiLtJ_G0026261.1 mouse_genomes_project 2 143052631 143132112 - MGP_NODShiLtJ_P0057107 Usp50 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057108.1 MGP_NODShiLtJ_G0026261.1 mouse_genomes_project 2 143107427 143116854 - Usp50 protein_coding processed_transcript MGP_NODShiLtJ_T0057109.1 MGP_NODShiLtJ_G0026261.1 mouse_genomes_project 2 143107798 143132118 - MGP_NODShiLtJ_P0057109 Usp50 protein_coding protein_coding MGP_NODShiLtJ_T0057110.1 MGP_NODShiLtJ_G0026261.1 mouse_genomes_project 2 143123163 143132111 - MGP_NODShiLtJ_P0057110 Usp50 protein_coding protein_coding MGP_NODShiLtJ_T0057111.1 MGP_NODShiLtJ_G0026261.1 mouse_genomes_project 2 143126362 143132132 - Usp50 protein_coding retained_intron MGP_NODShiLtJ_T0057049.1 MGP_NODShiLtJ_G0026247.1 mouse_genomes_project 2 141805221 141871610 - MGP_NODShiLtJ_P0057049 Cep152 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0057050.1 MGP_NODShiLtJ_G0026247.1 mouse_genomes_project 2 141805226 141871729 - MGP_NODShiLtJ_P0057050 Cep152 protein_coding protein_coding MGP_NODShiLtJ_T0056369.1 MGP_NODShiLtJ_G0026108.1 mouse_genomes_project 2 127283007 127284606 - MGP_NODShiLtJ_P0056369 Chrm5 protein_coding protein_coding MGP_NODShiLtJ_T0101789.1 MGP_NODShiLtJ_G0039957.1 mouse_genomes_project 2 36844646 36845585 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010242.1 MGP_NODShiLtJ_G0008375.1 mouse_genomes_project 2 8307604 8307725 + Mir669d miRNA miRNA MGP_NODShiLtJ_T0007186.1 MGP_NODShiLtJ_G0005886.1 mouse_genomes_project 2 82819482 82825301 - Gm13660 lincRNA lincRNA MGP_NODShiLtJ_T0011412.1 MGP_NODShiLtJ_G0009545.1 mouse_genomes_project 2 185105070 185105386 + Gm22596 misc_RNA misc_RNA MGP_NODShiLtJ_T0057692.1 MGP_NODShiLtJ_G0026397.1 mouse_genomes_project 2 162323546 162367443 + MGP_NODShiLtJ_P0057692 Banf2 protein_coding protein_coding MGP_NODShiLtJ_T0057693.1 MGP_NODShiLtJ_G0026397.1 mouse_genomes_project 2 162323589 162367443 + MGP_NODShiLtJ_P0057693 Banf2 protein_coding protein_coding MGP_NODShiLtJ_T0054344.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 46965338 47217429 - MGP_NODShiLtJ_P0054344 Gtdc1 protein_coding protein_coding MGP_NODShiLtJ_T0054345.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 46965340 47377978 - MGP_NODShiLtJ_P0054345 Gtdc1 protein_coding protein_coding MGP_NODShiLtJ_T0054346.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 46966056 46973270 - Gtdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0054347.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 46972292 46973637 - Gtdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0054348.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 46978347 47455048 - MGP_NODShiLtJ_P0054348 Gtdc1 protein_coding protein_coding MGP_NODShiLtJ_T0054349.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 47038083 47455151 - Gtdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0054350.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 47040218 47455544 - MGP_NODShiLtJ_P0054350 Gtdc1 protein_coding protein_coding MGP_NODShiLtJ_T0054351.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 47212886 47310622 - Gtdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0054352.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 47255702 47455123 - MGP_NODShiLtJ_P0054352 Gtdc1 protein_coding protein_coding MGP_NODShiLtJ_T0054353.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 47260173 47455121 - Gtdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0054354.1 MGP_NODShiLtJ_G0025553.1 mouse_genomes_project 2 47262638 47455036 - Gtdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0055576.1 MGP_NODShiLtJ_G0025899.1 mouse_genomes_project 2 99279082 99280018 - MGP_NODShiLtJ_P0055576 Olfr1211 protein_coding protein_coding MGP_NODShiLtJ_T0053277.1 MGP_NODShiLtJ_G0025368.1 mouse_genomes_project 2 28617773 28626293 - MGP_NODShiLtJ_P0053277 Spaca9 protein_coding protein_coding MGP_NODShiLtJ_T0053278.1 MGP_NODShiLtJ_G0025368.1 mouse_genomes_project 2 28617777 28626325 - MGP_NODShiLtJ_P0053278 Spaca9 protein_coding protein_coding MGP_NODShiLtJ_T0053279.1 MGP_NODShiLtJ_G0025368.1 mouse_genomes_project 2 28618705 28626369 - Spaca9 protein_coding processed_transcript MGP_NODShiLtJ_T0053280.1 MGP_NODShiLtJ_G0025368.1 mouse_genomes_project 2 28619399 28626316 - Spaca9 protein_coding processed_transcript MGP_NODShiLtJ_T0013508.1 MGP_NODShiLtJ_G0011616.1 mouse_genomes_project 2 88801549 88803103 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059159.1 MGP_NODShiLtJ_G0026745.1 mouse_genomes_project 2 189299927 189414358 - MGP_NODShiLtJ_P0059159 Nfatc2 protein_coding protein_coding MGP_NODShiLtJ_T0059160.1 MGP_NODShiLtJ_G0026745.1 mouse_genomes_project 2 189299927 189414253 - MGP_NODShiLtJ_P0059160 Nfatc2 protein_coding protein_coding MGP_NODShiLtJ_T0059161.1 MGP_NODShiLtJ_G0026745.1 mouse_genomes_project 2 189299930 189376255 - Nfatc2 protein_coding processed_transcript MGP_NODShiLtJ_T0059162.1 MGP_NODShiLtJ_G0026745.1 mouse_genomes_project 2 189341326 189425572 - Nfatc2 protein_coding processed_transcript MGP_NODShiLtJ_T0059163.1 MGP_NODShiLtJ_G0026745.1 mouse_genomes_project 2 189342230 189425597 - MGP_NODShiLtJ_P0059163 Nfatc2 protein_coding protein_coding MGP_NODShiLtJ_T0059164.1 MGP_NODShiLtJ_G0026745.1 mouse_genomes_project 2 189342516 189414184 - MGP_NODShiLtJ_P0059164 Nfatc2 protein_coding protein_coding MGP_NODShiLtJ_T0059165.1 MGP_NODShiLtJ_G0026745.1 mouse_genomes_project 2 189356591 189414324 - Nfatc2 protein_coding retained_intron MGP_NODShiLtJ_T0059166.1 MGP_NODShiLtJ_G0026745.1 mouse_genomes_project 2 189390439 189414358 - Nfatc2 protein_coding retained_intron MGP_NODShiLtJ_T0055438.1 MGP_NODShiLtJ_G0025774.1 mouse_genomes_project 2 94852464 94853397 - MGP_NODShiLtJ_P0055438 Olfr1019 protein_coding protein_coding MGP_NODShiLtJ_T0058685.1 MGP_NODShiLtJ_G0026629.1 mouse_genomes_project 2 180881676 180887557 - MGP_NODShiLtJ_P0058685 Emilin3 protein_coding protein_coding MGP_NODShiLtJ_T0058686.1 MGP_NODShiLtJ_G0026629.1 mouse_genomes_project 2 180881677 180887568 - MGP_NODShiLtJ_P0058686 Emilin3 protein_coding protein_coding MGP_NODShiLtJ_T0099087.1 MGP_NODShiLtJ_G0037481.1 mouse_genomes_project 2 253958 254099 - Gm22005 snRNA snRNA MGP_NODShiLtJ_T0059361.1 MGP_NODShiLtJ_G0026799.1 mouse_genomes_project 2 201535618 201542034 - Psma7 protein_coding retained_intron MGP_NODShiLtJ_T0059362.1 MGP_NODShiLtJ_G0026799.1 mouse_genomes_project 2 201535618 201542072 - MGP_NODShiLtJ_P0059362 Psma7 protein_coding protein_coding MGP_NODShiLtJ_T0059363.1 MGP_NODShiLtJ_G0026799.1 mouse_genomes_project 2 201536517 201537187 - Psma7 protein_coding retained_intron MGP_NODShiLtJ_T0059364.1 MGP_NODShiLtJ_G0026799.1 mouse_genomes_project 2 201537334 201538443 - Psma7 protein_coding retained_intron MGP_NODShiLtJ_T0059365.1 MGP_NODShiLtJ_G0026799.1 mouse_genomes_project 2 201537690 201539767 - Psma7 protein_coding retained_intron MGP_NODShiLtJ_T0059366.1 MGP_NODShiLtJ_G0026799.1 mouse_genomes_project 2 201538917 201542024 - Psma7 protein_coding processed_transcript MGP_NODShiLtJ_T0058154.1 MGP_NODShiLtJ_G0026534.1 mouse_genomes_project 2 173761448 173812612 - MGP_NODShiLtJ_P0058154 Snta1 protein_coding protein_coding MGP_NODShiLtJ_T0058155.1 MGP_NODShiLtJ_G0026534.1 mouse_genomes_project 2 173761448 173812594 - MGP_NODShiLtJ_P0058155 Snta1 protein_coding protein_coding MGP_NODShiLtJ_T0058156.1 MGP_NODShiLtJ_G0026534.1 mouse_genomes_project 2 173803740 173812493 - Snta1 protein_coding processed_transcript MGP_NODShiLtJ_T0100355.1 MGP_NODShiLtJ_G0038749.1 mouse_genomes_project 2 32945205 32945342 + Gm26236 snoRNA snoRNA MGP_NODShiLtJ_T0054273.1 MGP_NODShiLtJ_G0025541.1 mouse_genomes_project 2 39539103 39556812 - MGP_NODShiLtJ_P0054273 Nr5a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054274.1 MGP_NODShiLtJ_G0025541.1 mouse_genomes_project 2 39546399 39556260 - Nr5a1 protein_coding retained_intron MGP_NODShiLtJ_T0055336.1 MGP_NODShiLtJ_G0025736.1 mouse_genomes_project 2 93381552 93476901 - MGP_NODShiLtJ_P0055336 Gm28635 protein_coding protein_coding MGP_NODShiLtJ_T0101096.1 MGP_NODShiLtJ_G0039445.1 mouse_genomes_project 2 24043792 24044378 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0054124.1 MGP_NODShiLtJ_G0025492.1 mouse_genomes_project 2 35840022 35864970 - MGP_NODShiLtJ_P0054124 4930402F06Rik protein_coding protein_coding MGP_NODShiLtJ_T0054125.1 MGP_NODShiLtJ_G0025492.1 mouse_genomes_project 2 35840042 35864852 - MGP_NODShiLtJ_P0054125 4930402F06Rik protein_coding protein_coding MGP_NODShiLtJ_T0057670.1 MGP_NODShiLtJ_G0026390.1 mouse_genomes_project 2 160775093 161077407 - MGP_NODShiLtJ_P0057670 Kif16b protein_coding protein_coding MGP_NODShiLtJ_T0057671.1 MGP_NODShiLtJ_G0026390.1 mouse_genomes_project 2 160776330 160807201 - Kif16b protein_coding retained_intron MGP_NODShiLtJ_T0057672.1 MGP_NODShiLtJ_G0026390.1 mouse_genomes_project 2 160777377 161077247 - MGP_NODShiLtJ_P0057672 Kif16b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013458.1 MGP_NODShiLtJ_G0011566.1 mouse_genomes_project 2 71490481 71491673 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059319.1 MGP_NODShiLtJ_G0026785.1 mouse_genomes_project 2 195798862 195813280 - MGP_NODShiLtJ_P0059319 Ctsz protein_coding protein_coding MGP_NODShiLtJ_T0001055.1 MGP_NODShiLtJ_G0000981.1 mouse_genomes_project 2 74485250 74491179 + TEC TEC MGP_NODShiLtJ_T0055924.1 MGP_NODShiLtJ_G0025990.1 mouse_genomes_project 2 103372915 103373981 + 1700029I15Rik protein_coding retained_intron MGP_NODShiLtJ_T0055925.1 MGP_NODShiLtJ_G0025990.1 mouse_genomes_project 2 103373295 103373981 + MGP_NODShiLtJ_P0055925 1700029I15Rik protein_coding protein_coding MGP_NODShiLtJ_T0055926.1 MGP_NODShiLtJ_G0025990.1 mouse_genomes_project 2 103373295 103376086 + MGP_NODShiLtJ_P0055926 1700029I15Rik protein_coding protein_coding MGP_NODShiLtJ_T0055927.1 MGP_NODShiLtJ_G0025990.1 mouse_genomes_project 2 103373295 103373967 + MGP_NODShiLtJ_P0055927 1700029I15Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004036.1 MGP_NODShiLtJ_G0003571.1 mouse_genomes_project 2 148354882 148426223 - Gm14280 antisense antisense MGP_NODShiLtJ_T0007364.1 MGP_NODShiLtJ_G0006031.1 mouse_genomes_project 2 191686291 191696323 - Gm14264 lincRNA lincRNA MGP_NODShiLtJ_T0003908.1 MGP_NODShiLtJ_G0003483.1 mouse_genomes_project 2 39113858 39115843 + Gm13556 antisense antisense MGP_NODShiLtJ_T0098301.1 MGP_NODShiLtJ_G0036707.1 mouse_genomes_project 2 1351035 1353443 + Gm36988 sense_intronic sense_intronic MGP_NODShiLtJ_T0054469.1 MGP_NODShiLtJ_G0025570.1 mouse_genomes_project 2 56291375 56319048 - MGP_NODShiLtJ_P0054469 Arl5a protein_coding protein_coding MGP_NODShiLtJ_T0057372.1 MGP_NODShiLtJ_G0026330.1 mouse_genomes_project 2 147232643 147233386 - Ddrgk1 protein_coding retained_intron MGP_NODShiLtJ_T0057373.1 MGP_NODShiLtJ_G0026330.1 mouse_genomes_project 2 147232764 147243151 - MGP_NODShiLtJ_P0057373 Ddrgk1 protein_coding protein_coding MGP_NODShiLtJ_T0057374.1 MGP_NODShiLtJ_G0026330.1 mouse_genomes_project 2 147232803 147235942 - Ddrgk1 protein_coding processed_transcript MGP_NODShiLtJ_T0057375.1 MGP_NODShiLtJ_G0026330.1 mouse_genomes_project 2 147232899 147240327 - MGP_NODShiLtJ_P0057375 Ddrgk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057376.1 MGP_NODShiLtJ_G0026330.1 mouse_genomes_project 2 147233807 147242405 - Ddrgk1 protein_coding processed_transcript MGP_NODShiLtJ_T0010323.1 MGP_NODShiLtJ_G0008456.1 mouse_genomes_project 2 84531018 84531100 - Gm44360 miRNA miRNA MGP_NODShiLtJ_T0011382.1 MGP_NODShiLtJ_G0009515.1 mouse_genomes_project 2 34147242 34147612 + Nron misc_RNA misc_RNA MGP_NODShiLtJ_T0007371.1 MGP_NODShiLtJ_G0006037.1 mouse_genomes_project 2 193458743 193461131 + Gm14275 lincRNA lincRNA MGP_NODShiLtJ_T0017639.1 MGP_NODShiLtJ_G0015295.1 mouse_genomes_project 2 76894376 76897867 + Gm13631 processed_transcript processed_transcript MGP_NODShiLtJ_T0056332.1 MGP_NODShiLtJ_G0026083.1 mouse_genomes_project 2 126178728 126179667 - MGP_NODShiLtJ_P0056332 protein_coding protein_coding MGP_NODShiLtJ_T0053996.1 MGP_NODShiLtJ_G0025474.1 mouse_genomes_project 2 34063205 34225734 - MGP_NODShiLtJ_P0053996 Mvb12b protein_coding protein_coding MGP_NODShiLtJ_T0053997.1 MGP_NODShiLtJ_G0025474.1 mouse_genomes_project 2 34119634 34123083 - Mvb12b protein_coding retained_intron MGP_NODShiLtJ_T0053998.1 MGP_NODShiLtJ_G0025474.1 mouse_genomes_project 2 34121491 34224634 - Mvb12b protein_coding processed_transcript MGP_NODShiLtJ_T0053999.1 MGP_NODShiLtJ_G0025474.1 mouse_genomes_project 2 34160191 34224634 - MGP_NODShiLtJ_P0053999 Mvb12b protein_coding protein_coding MGP_NODShiLtJ_T0054000.1 MGP_NODShiLtJ_G0025474.1 mouse_genomes_project 2 34210381 34225271 - Mvb12b protein_coding processed_transcript MGP_NODShiLtJ_T0099108.1 MGP_NODShiLtJ_G0037502.1 mouse_genomes_project 2 57251658 57251764 - Gm25898 snRNA snRNA MGP_NODShiLtJ_T0017706.1 MGP_NODShiLtJ_G0015332.1 mouse_genomes_project 2 138647917 138668493 + 4930417H01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017707.1 MGP_NODShiLtJ_G0015332.1 mouse_genomes_project 2 138648777 138670969 + 4930417H01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017708.1 MGP_NODShiLtJ_G0015332.1 mouse_genomes_project 2 138648779 138668493 + 4930417H01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017709.1 MGP_NODShiLtJ_G0015332.1 mouse_genomes_project 2 138650122 138670970 + 4930417H01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017710.1 MGP_NODShiLtJ_G0015332.1 mouse_genomes_project 2 138650124 138668604 + 4930417H01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017711.1 MGP_NODShiLtJ_G0015332.1 mouse_genomes_project 2 138658613 138671829 + 4930417H01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0057741.1 MGP_NODShiLtJ_G0026408.1 mouse_genomes_project 2 162939620 163123513 + MGP_NODShiLtJ_P0057741 Dtd1 protein_coding protein_coding MGP_NODShiLtJ_T0057742.1 MGP_NODShiLtJ_G0026408.1 mouse_genomes_project 2 162965885 163123195 + Dtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0057743.1 MGP_NODShiLtJ_G0026408.1 mouse_genomes_project 2 163025967 163098900 + Dtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0057744.1 MGP_NODShiLtJ_G0026408.1 mouse_genomes_project 2 163084475 163123249 + Dtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0057745.1 MGP_NODShiLtJ_G0026408.1 mouse_genomes_project 2 163090311 163123030 + Dtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0056534.1 MGP_NODShiLtJ_G0026147.1 mouse_genomes_project 2 134644045 134653005 + MGP_NODShiLtJ_P0056534 Rad51 protein_coding protein_coding MGP_NODShiLtJ_T0056535.1 MGP_NODShiLtJ_G0026147.1 mouse_genomes_project 2 134644059 134669394 + MGP_NODShiLtJ_P0056535 Rad51 protein_coding protein_coding MGP_NODShiLtJ_T0056536.1 MGP_NODShiLtJ_G0026147.1 mouse_genomes_project 2 134644066 134664895 + Rad51 protein_coding retained_intron MGP_NODShiLtJ_T0056537.1 MGP_NODShiLtJ_G0026147.1 mouse_genomes_project 2 134644069 134669142 + MGP_NODShiLtJ_P0056537 Rad51 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056538.1 MGP_NODShiLtJ_G0026147.1 mouse_genomes_project 2 134649969 134651421 + Rad51 protein_coding retained_intron MGP_NODShiLtJ_T0056539.1 MGP_NODShiLtJ_G0026147.1 mouse_genomes_project 2 134652961 134681261 + MGP_NODShiLtJ_P0056539 Rad51 protein_coding protein_coding MGP_NODShiLtJ_T0056540.1 MGP_NODShiLtJ_G0026147.1 mouse_genomes_project 2 134662805 134666565 + Rad51 protein_coding retained_intron MGP_NODShiLtJ_T0056541.1 MGP_NODShiLtJ_G0026147.1 mouse_genomes_project 2 134666271 134667318 + Rad51 protein_coding retained_intron MGP_NODShiLtJ_T0053897.1 MGP_NODShiLtJ_G0025457.1 mouse_genomes_project 2 32999122 33035271 + MGP_NODShiLtJ_P0053897 Sh2d3c protein_coding protein_coding MGP_NODShiLtJ_T0053898.1 MGP_NODShiLtJ_G0025457.1 mouse_genomes_project 2 33006317 33025257 + Sh2d3c protein_coding processed_transcript MGP_NODShiLtJ_T0053899.1 MGP_NODShiLtJ_G0025457.1 mouse_genomes_project 2 33006317 33035787 + MGP_NODShiLtJ_P0053899 Sh2d3c protein_coding protein_coding MGP_NODShiLtJ_T0053902.1 MGP_NODShiLtJ_G0025457.1 mouse_genomes_project 2 33014987 33021734 + Sh2d3c protein_coding processed_transcript MGP_NODShiLtJ_T0053903.1 MGP_NODShiLtJ_G0025457.1 mouse_genomes_project 2 33021902 33027477 + Sh2d3c protein_coding processed_transcript MGP_NODShiLtJ_T0053904.1 MGP_NODShiLtJ_G0025457.1 mouse_genomes_project 2 33021904 33024089 + Sh2d3c protein_coding processed_transcript MGP_NODShiLtJ_T0053905.1 MGP_NODShiLtJ_G0025457.1 mouse_genomes_project 2 33021999 33034848 + MGP_NODShiLtJ_P0053905 Sh2d3c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055486.1 MGP_NODShiLtJ_G0025821.1 mouse_genomes_project 2 96531387 96535206 + MGP_NODShiLtJ_P0055486 Olfr1102 protein_coding protein_coding MGP_NODShiLtJ_T0010270.1 MGP_NODShiLtJ_G0008403.1 mouse_genomes_project 2 8366654 8366779 + Mir669h miRNA miRNA MGP_NODShiLtJ_T0052461.1 MGP_NODShiLtJ_G0025217.1 mouse_genomes_project 2 17873745 17875198 + MGP_NODShiLtJ_P0052461 4930426L09Rik protein_coding protein_coding MGP_NODShiLtJ_T0017672.1 MGP_NODShiLtJ_G0015318.1 mouse_genomes_project 2 117830881 117840623 + Platr14 processed_transcript processed_transcript MGP_NODShiLtJ_T0017673.1 MGP_NODShiLtJ_G0015318.1 mouse_genomes_project 2 117830897 117840620 + Platr14 processed_transcript processed_transcript MGP_NODShiLtJ_T0017674.1 MGP_NODShiLtJ_G0015318.1 mouse_genomes_project 2 117830902 117843996 + Platr14 processed_transcript processed_transcript MGP_NODShiLtJ_T0017675.1 MGP_NODShiLtJ_G0015318.1 mouse_genomes_project 2 117830910 117840696 + Platr14 processed_transcript processed_transcript MGP_NODShiLtJ_T0017676.1 MGP_NODShiLtJ_G0015318.1 mouse_genomes_project 2 117831177 117840617 + Platr14 processed_transcript processed_transcript MGP_NODShiLtJ_T0017677.1 MGP_NODShiLtJ_G0015318.1 mouse_genomes_project 2 117839763 117841399 + Platr14 processed_transcript processed_transcript MGP_NODShiLtJ_T0013746.1 MGP_NODShiLtJ_G0011854.1 mouse_genomes_project 2 187735793 187737203 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058791.1 MGP_NODShiLtJ_G0026656.1 mouse_genomes_project 2 184336069 184353531 + MGP_NODShiLtJ_P0058791 Stk4 protein_coding protein_coding MGP_NODShiLtJ_T0058792.1 MGP_NODShiLtJ_G0026656.1 mouse_genomes_project 2 184340694 184429491 + MGP_NODShiLtJ_P0058792 Stk4 protein_coding protein_coding MGP_NODShiLtJ_T0058793.1 MGP_NODShiLtJ_G0026656.1 mouse_genomes_project 2 184348548 184368403 + Stk4 protein_coding processed_transcript MGP_NODShiLtJ_T0058794.1 MGP_NODShiLtJ_G0026656.1 mouse_genomes_project 2 184372942 184391562 + MGP_NODShiLtJ_P0058794 Stk4 protein_coding protein_coding MGP_NODShiLtJ_T0058795.1 MGP_NODShiLtJ_G0026656.1 mouse_genomes_project 2 184383408 184429491 + MGP_NODShiLtJ_P0058795 Stk4 protein_coding protein_coding MGP_NODShiLtJ_T0052360.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 12836319 12837824 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052361.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 12837516 13264476 + MGP_NODShiLtJ_P0052361 Cacnb2 protein_coding protein_coding MGP_NODShiLtJ_T0052362.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 12838332 13238040 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052363.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 12979926 13264475 + Cacnb2 protein_coding processed_transcript MGP_NODShiLtJ_T0052364.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13011900 13238874 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052365.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13092622 13249200 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052366.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13092688 13262647 + MGP_NODShiLtJ_P0052366 Cacnb2 protein_coding protein_coding MGP_NODShiLtJ_T0052367.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13143434 13249115 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052368.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13143435 13249200 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052369.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13143448 13262585 + MGP_NODShiLtJ_P0052369 Cacnb2 protein_coding protein_coding MGP_NODShiLtJ_T0052370.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13143770 13240709 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052371.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13144200 13168763 + MGP_NODShiLtJ_P0052371 Cacnb2 protein_coding protein_coding MGP_NODShiLtJ_T0052372.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13144527 13242461 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052373.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13144531 13263664 + Cacnb2 protein_coding retained_intron MGP_NODShiLtJ_T0052374.1 MGP_NODShiLtJ_G0025202.1 mouse_genomes_project 2 13237958 13256150 + MGP_NODShiLtJ_P0052374 Cacnb2 protein_coding protein_coding MGP_NODShiLtJ_T0013676.1 MGP_NODShiLtJ_G0011784.1 mouse_genomes_project 2 162156953 162157284 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013332.1 MGP_NODShiLtJ_G0011440.1 mouse_genomes_project 2 17991974 17993372 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013464.1 MGP_NODShiLtJ_G0011572.1 mouse_genomes_project 2 74255129 74255611 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098005.1 MGP_NODShiLtJ_G0036417.1 mouse_genomes_project 2 89562091 89562199 - Gm23900 rRNA rRNA MGP_NODShiLtJ_T0013489.1 MGP_NODShiLtJ_G0011597.1 mouse_genomes_project 2 83010005 83010750 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011413.1 MGP_NODShiLtJ_G0009546.1 mouse_genomes_project 2 187260790 187261137 + Gm25265 misc_RNA misc_RNA MGP_NODShiLtJ_T0054382.1 MGP_NODShiLtJ_G0025555.1 mouse_genomes_project 2 52237212 52350415 + MGP_NODShiLtJ_P0054382 Acvr2a protein_coding protein_coding MGP_NODShiLtJ_T0054383.1 MGP_NODShiLtJ_G0025555.1 mouse_genomes_project 2 52328431 52338288 + Acvr2a protein_coding processed_transcript MGP_NODShiLtJ_T0052862.1 MGP_NODShiLtJ_G0025287.1 mouse_genomes_project 2 25131802 25135133 - MGP_NODShiLtJ_P0052862 Ptgds protein_coding protein_coding MGP_NODShiLtJ_T0052863.1 MGP_NODShiLtJ_G0025287.1 mouse_genomes_project 2 25131802 25134929 - MGP_NODShiLtJ_P0052863 Ptgds protein_coding protein_coding MGP_NODShiLtJ_T0052864.1 MGP_NODShiLtJ_G0025287.1 mouse_genomes_project 2 25131802 25134836 - MGP_NODShiLtJ_P0052864 Ptgds protein_coding protein_coding MGP_NODShiLtJ_T0052865.1 MGP_NODShiLtJ_G0025287.1 mouse_genomes_project 2 25131804 25134470 - Ptgds protein_coding retained_intron MGP_NODShiLtJ_T0052866.1 MGP_NODShiLtJ_G0025287.1 mouse_genomes_project 2 25131805 25134244 - Ptgds protein_coding processed_transcript MGP_NODShiLtJ_T0056267.1 MGP_NODShiLtJ_G0026058.1 mouse_genomes_project 2 120470136 120482761 - MGP_NODShiLtJ_P0056267 Arl14ep protein_coding protein_coding MGP_NODShiLtJ_T0056268.1 MGP_NODShiLtJ_G0026058.1 mouse_genomes_project 2 120472036 120477999 - MGP_NODShiLtJ_P0056268 Arl14ep protein_coding protein_coding MGP_NODShiLtJ_T0056269.1 MGP_NODShiLtJ_G0026058.1 mouse_genomes_project 2 120472798 120476885 - Arl14ep protein_coding retained_intron MGP_NODShiLtJ_T0056270.1 MGP_NODShiLtJ_G0026058.1 mouse_genomes_project 2 120475015 120482734 - Arl14ep protein_coding retained_intron MGP_NODShiLtJ_T0056602.1 MGP_NODShiLtJ_G0026166.1 mouse_genomes_project 2 135325049 135333993 + MGP_NODShiLtJ_P0056602 Itpka protein_coding protein_coding MGP_NODShiLtJ_T0013389.1 MGP_NODShiLtJ_G0011497.1 mouse_genomes_project 2 40477959 40478442 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055731.1 MGP_NODShiLtJ_G0025966.1 mouse_genomes_project 2 101973899 101992463 + MGP_NODShiLtJ_P0055731 Mybpc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055732.1 MGP_NODShiLtJ_G0025966.1 mouse_genomes_project 2 101974093 101992462 + MGP_NODShiLtJ_P0055732 Mybpc3 protein_coding protein_coding MGP_NODShiLtJ_T0055733.1 MGP_NODShiLtJ_G0025966.1 mouse_genomes_project 2 101974093 101992456 + MGP_NODShiLtJ_P0055733 Mybpc3 protein_coding protein_coding MGP_NODShiLtJ_T0055734.1 MGP_NODShiLtJ_G0025966.1 mouse_genomes_project 2 101974093 101992456 + MGP_NODShiLtJ_P0055734 Mybpc3 protein_coding protein_coding MGP_NODShiLtJ_T0013715.1 MGP_NODShiLtJ_G0011823.1 mouse_genomes_project 2 175613513 175614056 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003827.1 MGP_NODShiLtJ_G0003421.1 mouse_genomes_project 2 440887 446821 + Gm13184 antisense antisense MGP_NODShiLtJ_T0013341.1 MGP_NODShiLtJ_G0011449.1 mouse_genomes_project 2 21933795 21934130 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098154.1 MGP_NODShiLtJ_G0036566.1 mouse_genomes_project 2 148079408 148079710 - Gm22902 ribozyme ribozyme MGP_NODShiLtJ_T0007158.1 MGP_NODShiLtJ_G0005863.1 mouse_genomes_project 2 72406181 72476186 + Gm28638 lincRNA lincRNA MGP_NODShiLtJ_T0056171.1 MGP_NODShiLtJ_G0026038.1 mouse_genomes_project 2 117339838 117341819 + MGP_NODShiLtJ_P0056171 A930018P22Rik protein_coding protein_coding MGP_NODShiLtJ_T0013404.1 MGP_NODShiLtJ_G0011512.1 mouse_genomes_project 2 51474094 51474527 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001076.1 MGP_NODShiLtJ_G0001001.1 mouse_genomes_project 2 176453394 176456740 - TEC TEC MGP_NODShiLtJ_T0057073.1 MGP_NODShiLtJ_G0026253.1 mouse_genomes_project 2 142242855 142432667 - MGP_NODShiLtJ_P0057073 Fam227b protein_coding protein_coding MGP_NODShiLtJ_T0057074.1 MGP_NODShiLtJ_G0026253.1 mouse_genomes_project 2 142243002 142425494 - MGP_NODShiLtJ_P0057074 Fam227b protein_coding protein_coding MGP_NODShiLtJ_T0057075.1 MGP_NODShiLtJ_G0026253.1 mouse_genomes_project 2 142243002 142432647 - MGP_NODShiLtJ_P0057075 Fam227b protein_coding protein_coding MGP_NODShiLtJ_T0057076.1 MGP_NODShiLtJ_G0026253.1 mouse_genomes_project 2 142261722 142432667 - Fam227b protein_coding retained_intron MGP_NODShiLtJ_T0013603.1 MGP_NODShiLtJ_G0011711.1 mouse_genomes_project 2 126079638 126141972 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007202.1 MGP_NODShiLtJ_G0005900.1 mouse_genomes_project 2 103483794 103531291 + Gm13814 lincRNA lincRNA MGP_NODShiLtJ_T0055573.1 MGP_NODShiLtJ_G0025896.1 mouse_genomes_project 2 99163695 99166118 + MGP_NODShiLtJ_P0055573 Olfr1206 protein_coding protein_coding MGP_NODShiLtJ_T0101806.1 MGP_NODShiLtJ_G0039974.1 mouse_genomes_project 2 94980976 94982318 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0057125.1 MGP_NODShiLtJ_G0026264.1 mouse_genomes_project 2 143376639 143411132 + Ap4e1 protein_coding retained_intron MGP_NODShiLtJ_T0057126.1 MGP_NODShiLtJ_G0026264.1 mouse_genomes_project 2 143376643 143381536 + Ap4e1 protein_coding retained_intron MGP_NODShiLtJ_T0057127.1 MGP_NODShiLtJ_G0026264.1 mouse_genomes_project 2 143376646 143420662 + MGP_NODShiLtJ_P0057127 Ap4e1 protein_coding protein_coding MGP_NODShiLtJ_T0057128.1 MGP_NODShiLtJ_G0026264.1 mouse_genomes_project 2 143376652 143443745 + MGP_NODShiLtJ_P0057128 Ap4e1 protein_coding protein_coding MGP_NODShiLtJ_T0057129.1 MGP_NODShiLtJ_G0026264.1 mouse_genomes_project 2 143376674 143401103 + MGP_NODShiLtJ_P0057129 Ap4e1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057130.1 MGP_NODShiLtJ_G0026264.1 mouse_genomes_project 2 143376676 143436361 + MGP_NODShiLtJ_P0057130 Ap4e1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057131.1 MGP_NODShiLtJ_G0026264.1 mouse_genomes_project 2 143376676 143422979 + MGP_NODShiLtJ_P0057131 Ap4e1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057132.1 MGP_NODShiLtJ_G0026264.1 mouse_genomes_project 2 143425148 143436190 + MGP_NODShiLtJ_P0057132 Ap4e1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058001.1 MGP_NODShiLtJ_G0026492.1 mouse_genomes_project 2 171801224 171809515 + MGP_NODShiLtJ_P0058001 Rem1 protein_coding protein_coding MGP_NODShiLtJ_T0058002.1 MGP_NODShiLtJ_G0026492.1 mouse_genomes_project 2 171801226 171802578 + MGP_NODShiLtJ_P0058002 Rem1 protein_coding protein_coding MGP_NODShiLtJ_T0058003.1 MGP_NODShiLtJ_G0026492.1 mouse_genomes_project 2 171807237 171809519 + Rem1 protein_coding retained_intron MGP_NODShiLtJ_T0054805.1 MGP_NODShiLtJ_G0025630.1 mouse_genomes_project 2 75882796 75896475 - MGP_NODShiLtJ_P0054805 Spc25 protein_coding protein_coding MGP_NODShiLtJ_T0054806.1 MGP_NODShiLtJ_G0025630.1 mouse_genomes_project 2 75882800 75896713 - MGP_NODShiLtJ_P0054806 Spc25 protein_coding protein_coding MGP_NODShiLtJ_T0054807.1 MGP_NODShiLtJ_G0025630.1 mouse_genomes_project 2 75886056 75895696 - MGP_NODShiLtJ_P0054807 Spc25 protein_coding protein_coding MGP_NODShiLtJ_T0054808.1 MGP_NODShiLtJ_G0025630.1 mouse_genomes_project 2 75886099 75896736 - MGP_NODShiLtJ_P0054808 Spc25 protein_coding protein_coding MGP_NODShiLtJ_T0054809.1 MGP_NODShiLtJ_G0025630.1 mouse_genomes_project 2 75887463 75896679 - Spc25 protein_coding processed_transcript MGP_NODShiLtJ_T0054810.1 MGP_NODShiLtJ_G0025630.1 mouse_genomes_project 2 75888738 75895781 - Spc25 protein_coding processed_transcript MGP_NODShiLtJ_T0054811.1 MGP_NODShiLtJ_G0025630.1 mouse_genomes_project 2 75896193 75896735 - Spc25 protein_coding processed_transcript MGP_NODShiLtJ_T0013627.1 MGP_NODShiLtJ_G0011735.1 mouse_genomes_project 2 137463411 137464372 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099140.1 MGP_NODShiLtJ_G0037534.1 mouse_genomes_project 2 171562060 171562123 + Gm27343 snRNA snRNA MGP_NODShiLtJ_T0010254.1 MGP_NODShiLtJ_G0008387.1 mouse_genomes_project 2 8358874 8358976 + Gm22925 miRNA miRNA MGP_NODShiLtJ_T0013422.1 MGP_NODShiLtJ_G0011530.1 mouse_genomes_project 2 56452837 56453120 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001077.1 MGP_NODShiLtJ_G0001002.1 mouse_genomes_project 2 190559687 190563950 - TEC TEC MGP_NODShiLtJ_T0003851.1 MGP_NODShiLtJ_G0003439.1 mouse_genomes_project 2 16754254 16761379 + Gm13330 antisense antisense MGP_NODShiLtJ_T0053351.1 MGP_NODShiLtJ_G0025381.1 mouse_genomes_project 2 29788465 29798935 + MGP_NODShiLtJ_P0053351 Coq4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053352.1 MGP_NODShiLtJ_G0025381.1 mouse_genomes_project 2 29789192 29797606 + MGP_NODShiLtJ_P0053352 Coq4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053353.1 MGP_NODShiLtJ_G0025381.1 mouse_genomes_project 2 29789231 29798747 + MGP_NODShiLtJ_P0053353 Coq4 protein_coding protein_coding MGP_NODShiLtJ_T0053354.1 MGP_NODShiLtJ_G0025381.1 mouse_genomes_project 2 29789243 29797006 + MGP_NODShiLtJ_P0053354 Coq4 protein_coding protein_coding MGP_NODShiLtJ_T0053355.1 MGP_NODShiLtJ_G0025381.1 mouse_genomes_project 2 29790949 29791611 + Coq4 protein_coding retained_intron MGP_NODShiLtJ_T0053356.1 MGP_NODShiLtJ_G0025381.1 mouse_genomes_project 2 29796568 29797990 + Coq4 protein_coding retained_intron MGP_NODShiLtJ_T0051998.1 MGP_NODShiLtJ_G0025142.1 mouse_genomes_project 2 292019 296955 - MGP_NODShiLtJ_P0051998 Rpp38 protein_coding protein_coding MGP_NODShiLtJ_T0010296.1 MGP_NODShiLtJ_G0008429.1 mouse_genomes_project 2 32395743 32395822 + Gm27805 miRNA miRNA MGP_NODShiLtJ_T0052194.1 MGP_NODShiLtJ_G0025176.1 mouse_genomes_project 2 7915855 7927082 + Kin protein_coding processed_transcript MGP_NODShiLtJ_T0052195.1 MGP_NODShiLtJ_G0025176.1 mouse_genomes_project 2 7915886 7928096 + MGP_NODShiLtJ_P0052195 Kin protein_coding protein_coding MGP_NODShiLtJ_T0052196.1 MGP_NODShiLtJ_G0025176.1 mouse_genomes_project 2 7925559 7927442 + Kin protein_coding processed_transcript MGP_NODShiLtJ_T0056256.1 MGP_NODShiLtJ_G0026055.1 mouse_genomes_project 2 119322324 119392965 + MGP_NODShiLtJ_P0056256 Immp1l protein_coding protein_coding MGP_NODShiLtJ_T0010363.1 MGP_NODShiLtJ_G0008496.1 mouse_genomes_project 2 171078580 171078669 - Mir1953 miRNA miRNA MGP_NODShiLtJ_T0055465.1 MGP_NODShiLtJ_G0025800.1 mouse_genomes_project 2 95538763 95539705 - MGP_NODShiLtJ_P0055465 Olfr1056 protein_coding protein_coding MGP_NODShiLtJ_T0098008.1 MGP_NODShiLtJ_G0036420.1 mouse_genomes_project 2 117524309 117524422 + Gm25554 rRNA rRNA MGP_NODShiLtJ_T0007139.1 MGP_NODShiLtJ_G0005846.1 mouse_genomes_project 2 51371348 51873840 - lincRNA lincRNA MGP_NODShiLtJ_T0053197.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27228222 27258382 - MGP_NODShiLtJ_P0053197 Brd3 protein_coding protein_coding MGP_NODShiLtJ_T0053198.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27228222 27258670 - MGP_NODShiLtJ_P0053198 Brd3 protein_coding protein_coding MGP_NODShiLtJ_T0053199.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27228243 27258657 - MGP_NODShiLtJ_P0053199 Brd3 protein_coding protein_coding MGP_NODShiLtJ_T0053200.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27230479 27246739 - MGP_NODShiLtJ_P0053200 Brd3 protein_coding protein_coding MGP_NODShiLtJ_T0053201.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27231887 27295729 - MGP_NODShiLtJ_P0053201 Brd3 protein_coding protein_coding MGP_NODShiLtJ_T0053202.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27231887 27258638 - MGP_NODShiLtJ_P0053202 Brd3 protein_coding protein_coding MGP_NODShiLtJ_T0053203.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27235612 27258637 - Brd3 protein_coding processed_transcript MGP_NODShiLtJ_T0053204.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27246153 27258591 - MGP_NODShiLtJ_P0053204 Brd3 protein_coding protein_coding MGP_NODShiLtJ_T0053205.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27246514 27247205 - Brd3 protein_coding processed_transcript MGP_NODShiLtJ_T0053206.1 MGP_NODShiLtJ_G0025352.1 mouse_genomes_project 2 27246621 27258165 - Brd3 protein_coding processed_transcript MGP_NODShiLtJ_T0057122.1 MGP_NODShiLtJ_G0026263.1 mouse_genomes_project 2 143254820 143299746 - MGP_NODShiLtJ_P0057122 Sppl2a protein_coding protein_coding MGP_NODShiLtJ_T0057123.1 MGP_NODShiLtJ_G0026263.1 mouse_genomes_project 2 143258719 143284963 - MGP_NODShiLtJ_P0057123 Sppl2a protein_coding protein_coding MGP_NODShiLtJ_T0057124.1 MGP_NODShiLtJ_G0026263.1 mouse_genomes_project 2 143279491 143288297 - Sppl2a protein_coding retained_intron MGP_NODShiLtJ_T0001013.1 MGP_NODShiLtJ_G0000939.1 mouse_genomes_project 2 11106768 11110004 + TEC TEC MGP_NODShiLtJ_T0004121.1 MGP_NODShiLtJ_G0003636.1 mouse_genomes_project 2 191516073 191529104 - Gm16796 antisense antisense MGP_NODShiLtJ_T0013699.1 MGP_NODShiLtJ_G0011807.1 mouse_genomes_project 2 169955771 169956554 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055603.1 MGP_NODShiLtJ_G0025924.1 mouse_genomes_project 2 99881835 99882753 - MGP_NODShiLtJ_P0055603 Olfr1239 protein_coding protein_coding MGP_NODShiLtJ_T0013703.1 MGP_NODShiLtJ_G0011811.1 mouse_genomes_project 2 171617207 171617690 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058801.1 MGP_NODShiLtJ_G0026661.1 mouse_genomes_project 2 184485856 184494025 - MGP_NODShiLtJ_P0058801 Wfdc15b protein_coding protein_coding MGP_NODShiLtJ_T0058802.1 MGP_NODShiLtJ_G0026661.1 mouse_genomes_project 2 184485856 184493996 - MGP_NODShiLtJ_P0058802 Wfdc15b protein_coding protein_coding MGP_NODShiLtJ_T0058803.1 MGP_NODShiLtJ_G0026661.1 mouse_genomes_project 2 184485857 184486986 - MGP_NODShiLtJ_P0058803 Wfdc15b protein_coding protein_coding MGP_NODShiLtJ_T0007141.1 MGP_NODShiLtJ_G0005848.1 mouse_genomes_project 2 54275840 54280185 + Gm13485 lincRNA lincRNA MGP_NODShiLtJ_T0007098.1 MGP_NODShiLtJ_G0005816.1 mouse_genomes_project 2 24756194 24781382 - Gm13387 lincRNA lincRNA MGP_NODShiLtJ_T0007099.1 MGP_NODShiLtJ_G0005816.1 mouse_genomes_project 2 24776876 24781382 - Gm13387 lincRNA lincRNA MGP_NODShiLtJ_T0007100.1 MGP_NODShiLtJ_G0005816.1 mouse_genomes_project 2 24779802 24781309 - Gm13387 lincRNA lincRNA MGP_NODShiLtJ_T0098194.1 MGP_NODShiLtJ_G0036606.1 mouse_genomes_project 2 192388699 192388963 - Gm26489 scaRNA scaRNA MGP_NODShiLtJ_T0058656.1 MGP_NODShiLtJ_G0026624.1 mouse_genomes_project 2 180509531 180564326 - MGP_NODShiLtJ_P0058656 protein_coding protein_coding MGP_NODShiLtJ_T0013402.1 MGP_NODShiLtJ_G0011510.1 mouse_genomes_project 2 48471723 48472722 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056301.1 MGP_NODShiLtJ_G0026066.1 mouse_genomes_project 2 124206254 124230498 + MGP_NODShiLtJ_P0056301 Ccdc34 protein_coding protein_coding MGP_NODShiLtJ_T0056302.1 MGP_NODShiLtJ_G0026066.1 mouse_genomes_project 2 124206399 124350205 + MGP_NODShiLtJ_P0056302 Ccdc34 protein_coding protein_coding MGP_NODShiLtJ_T0056303.1 MGP_NODShiLtJ_G0026066.1 mouse_genomes_project 2 124206417 124230504 + MGP_NODShiLtJ_P0056303 Ccdc34 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056304.1 MGP_NODShiLtJ_G0026066.1 mouse_genomes_project 2 124210410 124226688 + Ccdc34 protein_coding retained_intron MGP_NODShiLtJ_T0056305.1 MGP_NODShiLtJ_G0026066.1 mouse_genomes_project 2 124223451 124230031 + Ccdc34 protein_coding retained_intron MGP_NODShiLtJ_T0056306.1 MGP_NODShiLtJ_G0026066.1 mouse_genomes_project 2 124226319 124229846 + Ccdc34 protein_coding retained_intron MGP_NODShiLtJ_T0059446.1 MGP_NODShiLtJ_G0026818.1 mouse_genomes_project 2 202265862 202285728 + MGP_NODShiLtJ_P0059446 Slc17a9 protein_coding protein_coding MGP_NODShiLtJ_T0059447.1 MGP_NODShiLtJ_G0026818.1 mouse_genomes_project 2 202265978 202275828 + Slc17a9 protein_coding retained_intron MGP_NODShiLtJ_T0059448.1 MGP_NODShiLtJ_G0026818.1 mouse_genomes_project 2 202265999 202278577 + Slc17a9 protein_coding processed_transcript MGP_NODShiLtJ_T0059449.1 MGP_NODShiLtJ_G0026818.1 mouse_genomes_project 2 202277882 202284787 + Slc17a9 protein_coding processed_transcript MGP_NODShiLtJ_T0059450.1 MGP_NODShiLtJ_G0026818.1 mouse_genomes_project 2 202279738 202284865 + Slc17a9 protein_coding retained_intron MGP_NODShiLtJ_T0055604.1 MGP_NODShiLtJ_G0025925.1 mouse_genomes_project 2 99904939 99905884 - MGP_NODShiLtJ_P0055604 Olfr1240 protein_coding protein_coding MGP_NODShiLtJ_T0052901.1 MGP_NODShiLtJ_G0025295.1 mouse_genomes_project 2 25250496 25256815 - MGP_NODShiLtJ_P0052901 Gm996 protein_coding protein_coding MGP_NODShiLtJ_T0052902.1 MGP_NODShiLtJ_G0025295.1 mouse_genomes_project 2 25250510 25256844 - MGP_NODShiLtJ_P0052902 Gm996 protein_coding protein_coding MGP_NODShiLtJ_T0052903.1 MGP_NODShiLtJ_G0025295.1 mouse_genomes_project 2 25252053 25254978 - MGP_NODShiLtJ_P0052903 Gm996 protein_coding protein_coding MGP_NODShiLtJ_T0052904.1 MGP_NODShiLtJ_G0025295.1 mouse_genomes_project 2 25254891 25255344 - MGP_NODShiLtJ_P0052904 Gm996 protein_coding protein_coding MGP_NODShiLtJ_T0010318.1 MGP_NODShiLtJ_G0008451.1 mouse_genomes_project 2 81984091 81984228 - Gm44463 miRNA miRNA MGP_NODShiLtJ_T0054146.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36247038 36493011 - MGP_NODShiLtJ_P0054146 Ttll11 protein_coding protein_coding MGP_NODShiLtJ_T0054147.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36247038 36493011 - MGP_NODShiLtJ_P0054147 Ttll11 protein_coding protein_coding MGP_NODShiLtJ_T0054148.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36247459 36493153 - MGP_NODShiLtJ_P0054148 Ttll11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054149.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36247744 36451018 - MGP_NODShiLtJ_P0054149 Ttll11 protein_coding protein_coding MGP_NODShiLtJ_T0054150.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36281439 36387868 - Ttll11 protein_coding processed_transcript MGP_NODShiLtJ_T0054151.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36395155 36455121 - Ttll11 protein_coding processed_transcript MGP_NODShiLtJ_T0054152.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36408204 36493300 - Ttll11 protein_coding processed_transcript MGP_NODShiLtJ_T0054153.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36408499 36460765 - MGP_NODShiLtJ_P0054153 Ttll11 protein_coding protein_coding MGP_NODShiLtJ_T0054154.1 MGP_NODShiLtJ_G0025495.1 mouse_genomes_project 2 36408519 36462807 - MGP_NODShiLtJ_P0054154 Ttll11 protein_coding protein_coding MGP_NODShiLtJ_T0013622.1 MGP_NODShiLtJ_G0011730.1 mouse_genomes_project 2 135474456 135474791 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055556.1 MGP_NODShiLtJ_G0025880.1 mouse_genomes_project 2 98600584 98601051 - MGP_NODShiLtJ_P0055556 protein_coding protein_coding MGP_NODShiLtJ_T0055500.1 MGP_NODShiLtJ_G0025835.1 mouse_genomes_project 2 97137468 97138413 + MGP_NODShiLtJ_P0055500 Olfr1121 protein_coding protein_coding MGP_NODShiLtJ_T0056340.1 MGP_NODShiLtJ_G0026091.1 mouse_genomes_project 2 126680569 126681532 - MGP_NODShiLtJ_P0056340 Olfr1308 protein_coding protein_coding MGP_NODShiLtJ_T0100404.1 MGP_NODShiLtJ_G0038798.1 mouse_genomes_project 2 162569502 162569740 - Snord17 snoRNA snoRNA MGP_NODShiLtJ_T0055524.1 MGP_NODShiLtJ_G0025850.1 mouse_genomes_project 2 97578465 97579398 - MGP_NODShiLtJ_P0055524 Olfr1135 protein_coding protein_coding MGP_NODShiLtJ_T0010321.1 MGP_NODShiLtJ_G0008454.1 mouse_genomes_project 2 83743483 83743597 + Gm44337 miRNA miRNA MGP_NODShiLtJ_T0100401.1 MGP_NODShiLtJ_G0038795.1 mouse_genomes_project 2 146824955 146825027 + Snord57 snoRNA snoRNA MGP_NODShiLtJ_T0013662.1 MGP_NODShiLtJ_G0011770.1 mouse_genomes_project 2 153972049 153972519 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007358.1 MGP_NODShiLtJ_G0006026.1 mouse_genomes_project 2 190327157 190334698 - 4930529I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0058032.1 MGP_NODShiLtJ_G0026500.1 mouse_genomes_project 2 172133791 172135101 - MGP_NODShiLtJ_P0058032 Foxs1 protein_coding protein_coding MGP_NODShiLtJ_T0055528.1 MGP_NODShiLtJ_G0025854.1 mouse_genomes_project 2 97671179 97672115 + MGP_NODShiLtJ_P0055528 Olfr1140 protein_coding protein_coding MGP_NODShiLtJ_T0059139.1 MGP_NODShiLtJ_G0026739.1 mouse_genomes_project 2 188872140 188892612 + MGP_NODShiLtJ_P0059139 Pard6b protein_coding protein_coding MGP_NODShiLtJ_T0010259.1 MGP_NODShiLtJ_G0008392.1 mouse_genomes_project 2 8360873 8360971 + Mir669m-1 miRNA miRNA MGP_NODShiLtJ_T0055124.1 MGP_NODShiLtJ_G0025702.1 mouse_genomes_project 2 83837745 83839175 + Osbpl6 protein_coding processed_transcript MGP_NODShiLtJ_T0055125.1 MGP_NODShiLtJ_G0025702.1 mouse_genomes_project 2 83837775 84029795 + MGP_NODShiLtJ_P0055125 Osbpl6 protein_coding protein_coding MGP_NODShiLtJ_T0055126.1 MGP_NODShiLtJ_G0025702.1 mouse_genomes_project 2 83837775 84029799 + MGP_NODShiLtJ_P0055126 Osbpl6 protein_coding protein_coding MGP_NODShiLtJ_T0055127.1 MGP_NODShiLtJ_G0025702.1 mouse_genomes_project 2 83837795 84025744 + MGP_NODShiLtJ_P0055127 Osbpl6 protein_coding protein_coding MGP_NODShiLtJ_T0055128.1 MGP_NODShiLtJ_G0025702.1 mouse_genomes_project 2 83837798 83838706 + Osbpl6 protein_coding processed_transcript MGP_NODShiLtJ_T0055129.1 MGP_NODShiLtJ_G0025702.1 mouse_genomes_project 2 83926927 83970007 + Osbpl6 protein_coding processed_transcript MGP_NODShiLtJ_T0055130.1 MGP_NODShiLtJ_G0025702.1 mouse_genomes_project 2 83976839 84025178 + MGP_NODShiLtJ_P0055130 Osbpl6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055131.1 MGP_NODShiLtJ_G0025702.1 mouse_genomes_project 2 83996381 84009430 + Osbpl6 protein_coding processed_transcript MGP_NODShiLtJ_T0007245.1 MGP_NODShiLtJ_G0005933.1 mouse_genomes_project 2 132216865 132229975 + D330050G23Rik lincRNA lincRNA MGP_NODShiLtJ_T0007246.1 MGP_NODShiLtJ_G0005933.1 mouse_genomes_project 2 132216888 132229810 + D330050G23Rik lincRNA lincRNA MGP_NODShiLtJ_T0007247.1 MGP_NODShiLtJ_G0005933.1 mouse_genomes_project 2 132216907 132220838 + D330050G23Rik lincRNA lincRNA MGP_NODShiLtJ_T0055028.1 MGP_NODShiLtJ_G0025674.1 mouse_genomes_project 2 80506782 80554078 - MGP_NODShiLtJ_P0055028 Gpr155 protein_coding protein_coding MGP_NODShiLtJ_T0055029.1 MGP_NODShiLtJ_G0025674.1 mouse_genomes_project 2 80507234 80553918 - MGP_NODShiLtJ_P0055029 Gpr155 protein_coding protein_coding MGP_NODShiLtJ_T0055030.1 MGP_NODShiLtJ_G0025674.1 mouse_genomes_project 2 80508266 80553949 - MGP_NODShiLtJ_P0055030 Gpr155 protein_coding protein_coding MGP_NODShiLtJ_T0055031.1 MGP_NODShiLtJ_G0025674.1 mouse_genomes_project 2 80512923 80528811 - MGP_NODShiLtJ_P0055031 Gpr155 protein_coding protein_coding MGP_NODShiLtJ_T0055032.1 MGP_NODShiLtJ_G0025674.1 mouse_genomes_project 2 80516168 80553904 - Gpr155 protein_coding processed_transcript MGP_NODShiLtJ_T0055033.1 MGP_NODShiLtJ_G0025674.1 mouse_genomes_project 2 80516168 80553904 - Gpr155 protein_coding retained_intron MGP_NODShiLtJ_T0055034.1 MGP_NODShiLtJ_G0025674.1 mouse_genomes_project 2 80528719 80536429 - Gpr155 protein_coding processed_transcript MGP_NODShiLtJ_T0055035.1 MGP_NODShiLtJ_G0025674.1 mouse_genomes_project 2 80548911 80553917 - Gpr155 protein_coding retained_intron MGP_NODShiLtJ_T0010252.1 MGP_NODShiLtJ_G0008385.1 mouse_genomes_project 2 8358247 8358344 + Mir669a-2 miRNA miRNA MGP_NODShiLtJ_T0007275.1 MGP_NODShiLtJ_G0005956.1 mouse_genomes_project 2 150256293 150282025 + A430048G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0052458.1 MGP_NODShiLtJ_G0025216.1 mouse_genomes_project 2 17708027 17873529 - MGP_NODShiLtJ_P0052458 Pip4k2a protein_coding protein_coding MGP_NODShiLtJ_T0052459.1 MGP_NODShiLtJ_G0025216.1 mouse_genomes_project 2 17710147 17731837 - MGP_NODShiLtJ_P0052459 Pip4k2a protein_coding protein_coding MGP_NODShiLtJ_T0052460.1 MGP_NODShiLtJ_G0025216.1 mouse_genomes_project 2 17713273 17771542 - MGP_NODShiLtJ_P0052460 Pip4k2a protein_coding protein_coding MGP_NODShiLtJ_T0101847.1 MGP_NODShiLtJ_G0040015.1 mouse_genomes_project 2 172974902 173019274 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004023.1 MGP_NODShiLtJ_G0003563.1 mouse_genomes_project 2 145203247 145205682 - Gm14011 antisense antisense MGP_NODShiLtJ_T0059145.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189009942 189030883 - MGP_NODShiLtJ_P0059145 protein_coding protein_coding MGP_NODShiLtJ_T0059146.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189011175 189018702 - protein_coding retained_intron MGP_NODShiLtJ_T0059147.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189011175 189031095 - MGP_NODShiLtJ_P0059147 protein_coding protein_coding MGP_NODShiLtJ_T0059148.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189011176 189016847 - protein_coding retained_intron MGP_NODShiLtJ_T0059149.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189011410 189014156 - protein_coding retained_intron MGP_NODShiLtJ_T0059150.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189011436 189030832 - MGP_NODShiLtJ_P0059150 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059151.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189011482 189023836 - protein_coding retained_intron MGP_NODShiLtJ_T0059152.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189012278 189030580 - protein_coding processed_transcript MGP_NODShiLtJ_T0059153.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189018614 189030734 - protein_coding retained_intron MGP_NODShiLtJ_T0059154.1 MGP_NODShiLtJ_G0026742.1 mouse_genomes_project 2 189020475 189030866 - protein_coding retained_intron MGP_NODShiLtJ_T0053093.1 MGP_NODShiLtJ_G0025331.1 mouse_genomes_project 2 26340502 26351606 - Agpat2 protein_coding processed_transcript MGP_NODShiLtJ_T0053094.1 MGP_NODShiLtJ_G0025331.1 mouse_genomes_project 2 26340502 26351727 - MGP_NODShiLtJ_P0053094 Agpat2 protein_coding protein_coding MGP_NODShiLtJ_T0053095.1 MGP_NODShiLtJ_G0025331.1 mouse_genomes_project 2 26341948 26351812 - Agpat2 protein_coding processed_transcript MGP_NODShiLtJ_T0053096.1 MGP_NODShiLtJ_G0025331.1 mouse_genomes_project 2 26343563 26351111 - Agpat2 protein_coding processed_transcript MGP_NODShiLtJ_T0053097.1 MGP_NODShiLtJ_G0025331.1 mouse_genomes_project 2 26343886 26351321 - MGP_NODShiLtJ_P0053097 Agpat2 protein_coding protein_coding MGP_NODShiLtJ_T0013705.1 MGP_NODShiLtJ_G0011813.1 mouse_genomes_project 2 171929166 171929774 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056457.1 MGP_NODShiLtJ_G0026128.1 mouse_genomes_project 2 133664581 133724355 - MGP_NODShiLtJ_P0056457 Fsip1 protein_coding protein_coding MGP_NODShiLtJ_T0056458.1 MGP_NODShiLtJ_G0026128.1 mouse_genomes_project 2 133708856 133724345 - MGP_NODShiLtJ_P0056458 Fsip1 protein_coding protein_coding MGP_NODShiLtJ_T0007222.1 MGP_NODShiLtJ_G0005914.1 mouse_genomes_project 2 116537791 116549636 - BC016548 lincRNA lincRNA MGP_NODShiLtJ_T0007223.1 MGP_NODShiLtJ_G0005914.1 mouse_genomes_project 2 116544570 116549634 - BC016548 lincRNA lincRNA MGP_NODShiLtJ_T0001019.1 MGP_NODShiLtJ_G0000945.1 mouse_genomes_project 2 11367147 11368836 - TEC TEC MGP_NODShiLtJ_T0059551.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202942553 202950572 - MGP_NODShiLtJ_P0059551 Arfrp1 protein_coding protein_coding MGP_NODShiLtJ_T0059552.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202942558 202951217 - MGP_NODShiLtJ_P0059552 Arfrp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059553.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202942614 202944870 - Arfrp1 protein_coding retained_intron MGP_NODShiLtJ_T0059554.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202944044 202951209 - Arfrp1 protein_coding retained_intron MGP_NODShiLtJ_T0059555.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202944157 202951195 - Arfrp1 protein_coding retained_intron MGP_NODShiLtJ_T0059556.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202944231 202950686 - Arfrp1 protein_coding retained_intron MGP_NODShiLtJ_T0059557.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202944438 202951236 - Arfrp1 protein_coding retained_intron MGP_NODShiLtJ_T0059558.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202944444 202951213 - MGP_NODShiLtJ_P0059558 Arfrp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059559.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202946178 202951142 - Arfrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0059560.1 MGP_NODShiLtJ_G0026836.1 mouse_genomes_project 2 202950164 202951226 - Arfrp1 protein_coding retained_intron MGP_NODShiLtJ_T0053190.1 MGP_NODShiLtJ_G0025351.1 mouse_genomes_project 2 27036467 27207985 - MGP_NODShiLtJ_P0053190 Vav2 protein_coding protein_coding MGP_NODShiLtJ_T0053191.1 MGP_NODShiLtJ_G0025351.1 mouse_genomes_project 2 27036467 27207864 - MGP_NODShiLtJ_P0053191 Vav2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053192.1 MGP_NODShiLtJ_G0025351.1 mouse_genomes_project 2 27042818 27054490 - Vav2 protein_coding processed_transcript MGP_NODShiLtJ_T0053193.1 MGP_NODShiLtJ_G0025351.1 mouse_genomes_project 2 27043282 27056028 - Vav2 protein_coding processed_transcript MGP_NODShiLtJ_T0053194.1 MGP_NODShiLtJ_G0025351.1 mouse_genomes_project 2 27043944 27046162 - Vav2 protein_coding processed_transcript MGP_NODShiLtJ_T0053195.1 MGP_NODShiLtJ_G0025351.1 mouse_genomes_project 2 27043944 27046239 - Vav2 protein_coding processed_transcript MGP_NODShiLtJ_T0053196.1 MGP_NODShiLtJ_G0025351.1 mouse_genomes_project 2 27079163 27122937 - Vav2 protein_coding processed_transcript MGP_NODShiLtJ_T0013290.1 MGP_NODShiLtJ_G0011398.1 mouse_genomes_project 2 1761102 1762117 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055548.1 MGP_NODShiLtJ_G0025872.1 mouse_genomes_project 2 98175482 98176463 - MGP_NODShiLtJ_P0055548 Olfr1164 protein_coding protein_coding MGP_NODShiLtJ_T0052942.1 MGP_NODShiLtJ_G0025310.1 mouse_genomes_project 2 25514854 25517239 + MGP_NODShiLtJ_P0052942 Lcn9 protein_coding protein_coding MGP_NODShiLtJ_T0017609.1 MGP_NODShiLtJ_G0015276.1 mouse_genomes_project 2 27859818 27864820 - Gm13372 processed_transcript processed_transcript MGP_NODShiLtJ_T0004047.1 MGP_NODShiLtJ_G0003577.1 mouse_genomes_project 2 152255360 152302358 - 4930545L23Rik antisense antisense MGP_NODShiLtJ_T0056552.1 MGP_NODShiLtJ_G0026151.1 mouse_genomes_project 2 134709055 134712113 + MGP_NODShiLtJ_P0056552 Gm14137 protein_coding protein_coding MGP_NODShiLtJ_T0056742.1 MGP_NODShiLtJ_G0026186.1 mouse_genomes_project 2 136271082 136276374 - MGP_NODShiLtJ_P0056742 Lrrc57 protein_coding protein_coding MGP_NODShiLtJ_T0056743.1 MGP_NODShiLtJ_G0026186.1 mouse_genomes_project 2 136271082 136276209 - MGP_NODShiLtJ_P0056743 Lrrc57 protein_coding protein_coding MGP_NODShiLtJ_T0056744.1 MGP_NODShiLtJ_G0026186.1 mouse_genomes_project 2 136271082 136276364 - MGP_NODShiLtJ_P0056744 Lrrc57 protein_coding protein_coding MGP_NODShiLtJ_T0056745.1 MGP_NODShiLtJ_G0026186.1 mouse_genomes_project 2 136271082 136276169 - MGP_NODShiLtJ_P0056745 Lrrc57 protein_coding protein_coding MGP_NODShiLtJ_T0056746.1 MGP_NODShiLtJ_G0026186.1 mouse_genomes_project 2 136271664 136274826 - MGP_NODShiLtJ_P0056746 Lrrc57 protein_coding protein_coding MGP_NODShiLtJ_T0056747.1 MGP_NODShiLtJ_G0026186.1 mouse_genomes_project 2 136272837 136276362 - MGP_NODShiLtJ_P0056747 Lrrc57 protein_coding protein_coding MGP_NODShiLtJ_T0056748.1 MGP_NODShiLtJ_G0026186.1 mouse_genomes_project 2 136275671 136276156 - Lrrc57 protein_coding retained_intron MGP_NODShiLtJ_T0003902.1 MGP_NODShiLtJ_G0003479.1 mouse_genomes_project 2 34140109 34147877 + Nron antisense antisense MGP_NODShiLtJ_T0003903.1 MGP_NODShiLtJ_G0003479.1 mouse_genomes_project 2 34140121 34146741 + Nron antisense antisense MGP_NODShiLtJ_T0003904.1 MGP_NODShiLtJ_G0003479.1 mouse_genomes_project 2 34140152 34145724 + Nron antisense antisense MGP_NODShiLtJ_T0057999.1 MGP_NODShiLtJ_G0026490.1 mouse_genomes_project 2 171778206 171787642 + MGP_NODShiLtJ_P0057999 Defb36 protein_coding protein_coding MGP_NODShiLtJ_T0098016.1 MGP_NODShiLtJ_G0036428.1 mouse_genomes_project 2 184431370 184431488 - n-R5s207 rRNA rRNA MGP_NODShiLtJ_T0054969.1 MGP_NODShiLtJ_G0025663.1 mouse_genomes_project 2 78769763 78847651 + Itga6 protein_coding processed_transcript MGP_NODShiLtJ_T0054970.1 MGP_NODShiLtJ_G0025663.1 mouse_genomes_project 2 78809841 78848340 + Itga6 protein_coding processed_transcript MGP_NODShiLtJ_T0054971.1 MGP_NODShiLtJ_G0025663.1 mouse_genomes_project 2 78809852 78883680 + MGP_NODShiLtJ_P0054971 Itga6 protein_coding protein_coding MGP_NODShiLtJ_T0054972.1 MGP_NODShiLtJ_G0025663.1 mouse_genomes_project 2 78809890 78883678 + MGP_NODShiLtJ_P0054972 Itga6 protein_coding protein_coding MGP_NODShiLtJ_T0054973.1 MGP_NODShiLtJ_G0025663.1 mouse_genomes_project 2 78810051 78889060 + MGP_NODShiLtJ_P0054973 Itga6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054974.1 MGP_NODShiLtJ_G0025663.1 mouse_genomes_project 2 78854032 78882264 + MGP_NODShiLtJ_P0054974 Itga6 protein_coding protein_coding MGP_NODShiLtJ_T0054975.1 MGP_NODShiLtJ_G0025663.1 mouse_genomes_project 2 78865537 78866480 + Itga6 protein_coding processed_transcript MGP_NODShiLtJ_T0054976.1 MGP_NODShiLtJ_G0025663.1 mouse_genomes_project 2 78876688 78889659 + Itga6 protein_coding processed_transcript MGP_NODShiLtJ_T0057684.1 MGP_NODShiLtJ_G0026396.1 mouse_genomes_project 2 162233791 162240065 - Rrbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0057685.1 MGP_NODShiLtJ_G0026396.1 mouse_genomes_project 2 162233791 162301793 - MGP_NODShiLtJ_P0057685 Rrbp1 protein_coding protein_coding MGP_NODShiLtJ_T0057686.1 MGP_NODShiLtJ_G0026396.1 mouse_genomes_project 2 162234524 162236133 - Rrbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0057687.1 MGP_NODShiLtJ_G0026396.1 mouse_genomes_project 2 162236888 162242966 - Rrbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0057688.1 MGP_NODShiLtJ_G0026396.1 mouse_genomes_project 2 162244166 162245429 - Rrbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0057689.1 MGP_NODShiLtJ_G0026396.1 mouse_genomes_project 2 162250222 162257110 - Rrbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0057690.1 MGP_NODShiLtJ_G0026396.1 mouse_genomes_project 2 162254355 162273646 - Rrbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0057691.1 MGP_NODShiLtJ_G0026396.1 mouse_genomes_project 2 162276333 162301793 - MGP_NODShiLtJ_P0057691 Rrbp1 protein_coding protein_coding MGP_NODShiLtJ_T0011393.1 MGP_NODShiLtJ_G0009526.1 mouse_genomes_project 2 79384949 79385257 + Zakit misc_RNA misc_RNA MGP_NODShiLtJ_T0001065.1 MGP_NODShiLtJ_G0000991.1 mouse_genomes_project 2 107257122 107278402 + TEC TEC MGP_NODShiLtJ_T0057858.1 MGP_NODShiLtJ_G0026443.1 mouse_genomes_project 2 169092615 169107184 + MGP_NODShiLtJ_P0057858 Gm14124 protein_coding protein_coding MGP_NODShiLtJ_T0007335.1 MGP_NODShiLtJ_G0006008.1 mouse_genomes_project 2 186932717 186951062 - Gm14268 lincRNA lincRNA MGP_NODShiLtJ_T0007336.1 MGP_NODShiLtJ_G0006008.1 mouse_genomes_project 2 186933003 186951092 - Gm14268 lincRNA lincRNA MGP_NODShiLtJ_T0100389.1 MGP_NODShiLtJ_G0038783.1 mouse_genomes_project 2 126553973 126554104 + Gm26421 snoRNA snoRNA MGP_NODShiLtJ_T0053663.1 MGP_NODShiLtJ_G0025423.1 mouse_genomes_project 2 31610401 31672475 + MGP_NODShiLtJ_P0053663 protein_coding protein_coding MGP_NODShiLtJ_T0053664.1 MGP_NODShiLtJ_G0025423.1 mouse_genomes_project 2 31610422 31672220 + MGP_NODShiLtJ_P0053664 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053665.1 MGP_NODShiLtJ_G0025423.1 mouse_genomes_project 2 31641561 31661937 + protein_coding retained_intron MGP_NODShiLtJ_T0053666.1 MGP_NODShiLtJ_G0025423.1 mouse_genomes_project 2 31670292 31672334 + protein_coding retained_intron MGP_NODShiLtJ_T0011394.1 MGP_NODShiLtJ_G0009527.1 mouse_genomes_project 2 81030417 81030584 - Gm27421 misc_RNA misc_RNA MGP_NODShiLtJ_T0007278.1 MGP_NODShiLtJ_G0005959.1 mouse_genomes_project 2 152809674 152816583 - Gm14211 lincRNA lincRNA MGP_NODShiLtJ_T0059093.1 MGP_NODShiLtJ_G0026729.1 mouse_genomes_project 2 187983625 188034954 - MGP_NODShiLtJ_P0059093 B4galt5 protein_coding protein_coding MGP_NODShiLtJ_T0059094.1 MGP_NODShiLtJ_G0026729.1 mouse_genomes_project 2 187986503 187991096 - MGP_NODShiLtJ_P0059094 B4galt5 protein_coding protein_coding MGP_NODShiLtJ_T0059095.1 MGP_NODShiLtJ_G0026729.1 mouse_genomes_project 2 187993007 187999366 - B4galt5 protein_coding processed_transcript MGP_NODShiLtJ_T0059096.1 MGP_NODShiLtJ_G0026729.1 mouse_genomes_project 2 187993007 187999411 - B4galt5 protein_coding processed_transcript MGP_NODShiLtJ_T0003930.1 MGP_NODShiLtJ_G0003499.1 mouse_genomes_project 2 71017200 71017525 + antisense antisense MGP_NODShiLtJ_T0059006.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186259134 186371501 - MGP_NODShiLtJ_P0059006 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059007.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186259134 186344106 - MGP_NODShiLtJ_P0059007 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059008.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186259137 186369027 - MGP_NODShiLtJ_P0059008 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059009.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186259137 186369027 - MGP_NODShiLtJ_P0059009 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059010.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186260345 186371522 - MGP_NODShiLtJ_P0059010 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059011.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186260372 186371398 - Zmynd8 protein_coding processed_transcript MGP_NODShiLtJ_T0059012.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186260372 186365205 - MGP_NODShiLtJ_P0059012 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059013.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186260582 186371624 - MGP_NODShiLtJ_P0059013 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059014.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186311155 186362553 - MGP_NODShiLtJ_P0059014 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059015.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186311211 186384582 - MGP_NODShiLtJ_P0059015 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059016.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186317169 186344106 - Zmynd8 protein_coding processed_transcript MGP_NODShiLtJ_T0059017.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186326010 186387634 - MGP_NODShiLtJ_P0059017 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059018.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186328749 186347929 - Zmynd8 protein_coding processed_transcript MGP_NODShiLtJ_T0059019.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186331711 186338085 - Zmynd8 protein_coding processed_transcript MGP_NODShiLtJ_T0059020.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186337995 186363376 - Zmynd8 protein_coding processed_transcript MGP_NODShiLtJ_T0059021.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186337995 186363184 - MGP_NODShiLtJ_P0059021 Zmynd8 protein_coding protein_coding MGP_NODShiLtJ_T0059022.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186337996 186366662 - Zmynd8 protein_coding processed_transcript MGP_NODShiLtJ_T0059023.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186359783 186370959 - Zmynd8 protein_coding processed_transcript MGP_NODShiLtJ_T0059024.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186361646 186370988 - Zmynd8 protein_coding retained_intron MGP_NODShiLtJ_T0059025.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186361924 186362966 - Zmynd8 protein_coding retained_intron MGP_NODShiLtJ_T0059026.1 MGP_NODShiLtJ_G0026717.1 mouse_genomes_project 2 186362032 186371501 - Zmynd8 protein_coding retained_intron MGP_NODShiLtJ_T0052356.1 MGP_NODShiLtJ_G0025200.1 mouse_genomes_project 2 12410691 12526501 + MGP_NODShiLtJ_P0052356 Mrc1 protein_coding protein_coding MGP_NODShiLtJ_T0052357.1 MGP_NODShiLtJ_G0025200.1 mouse_genomes_project 2 12523004 12526371 + Mrc1 protein_coding retained_intron MGP_NODShiLtJ_T0004131.1 MGP_NODShiLtJ_G0003643.1 mouse_genomes_project 2 195474372 195537869 - Gm10714 antisense antisense MGP_NODShiLtJ_T0004132.1 MGP_NODShiLtJ_G0003643.1 mouse_genomes_project 2 195474894 195475223 - Gm10714 antisense antisense MGP_NODShiLtJ_T0007319.1 MGP_NODShiLtJ_G0005992.1 mouse_genomes_project 2 179927780 179953478 + 9130015L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0056337.1 MGP_NODShiLtJ_G0026088.1 mouse_genomes_project 2 126526724 126528042 - MGP_NODShiLtJ_P0056337 Olfr1303 protein_coding protein_coding MGP_NODShiLtJ_T0101820.1 MGP_NODShiLtJ_G0039988.1 mouse_genomes_project 2 97761192 97761505 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013428.1 MGP_NODShiLtJ_G0011536.1 mouse_genomes_project 2 58539689 58540240 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057860.1 MGP_NODShiLtJ_G0026445.1 mouse_genomes_project 2 169101192 169101620 + MGP_NODShiLtJ_P0057860 Gm10130 protein_coding protein_coding MGP_NODShiLtJ_T0055727.1 MGP_NODShiLtJ_G0025965.1 mouse_genomes_project 2 101936026 101970656 + MGP_NODShiLtJ_P0055727 Spi1 protein_coding protein_coding MGP_NODShiLtJ_T0055728.1 MGP_NODShiLtJ_G0025965.1 mouse_genomes_project 2 101936044 101944190 + Spi1 protein_coding processed_transcript MGP_NODShiLtJ_T0055729.1 MGP_NODShiLtJ_G0025965.1 mouse_genomes_project 2 101949975 101972038 + MGP_NODShiLtJ_P0055729 Spi1 protein_coding protein_coding MGP_NODShiLtJ_T0055730.1 MGP_NODShiLtJ_G0025965.1 mouse_genomes_project 2 101950659 101969605 + MGP_NODShiLtJ_P0055730 Spi1 protein_coding protein_coding MGP_NODShiLtJ_T0013519.1 MGP_NODShiLtJ_G0011627.1 mouse_genomes_project 2 92711948 92712319 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011399.1 MGP_NODShiLtJ_G0009532.1 mouse_genomes_project 2 118472059 118472294 - Gm27308 misc_RNA misc_RNA MGP_NODShiLtJ_T0055572.1 MGP_NODShiLtJ_G0025895.1 mouse_genomes_project 2 99097292 99098385 + MGP_NODShiLtJ_P0055572 Olfr1205 protein_coding protein_coding MGP_NODShiLtJ_T0056395.1 MGP_NODShiLtJ_G0026115.1 mouse_genomes_project 2 128746456 128764022 - MGP_NODShiLtJ_P0056395 Arhgap11a protein_coding protein_coding MGP_NODShiLtJ_T0056396.1 MGP_NODShiLtJ_G0026115.1 mouse_genomes_project 2 128746459 128763976 - MGP_NODShiLtJ_P0056396 Arhgap11a protein_coding protein_coding MGP_NODShiLtJ_T0056397.1 MGP_NODShiLtJ_G0026115.1 mouse_genomes_project 2 128746510 128764017 - MGP_NODShiLtJ_P0056397 Arhgap11a protein_coding protein_coding MGP_NODShiLtJ_T0056398.1 MGP_NODShiLtJ_G0026115.1 mouse_genomes_project 2 128747715 128763658 - MGP_NODShiLtJ_P0056398 Arhgap11a protein_coding protein_coding MGP_NODShiLtJ_T0058202.1 MGP_NODShiLtJ_G0026547.1 mouse_genomes_project 2 174325121 174347347 - MGP_NODShiLtJ_P0058202 Eif2s2 protein_coding protein_coding MGP_NODShiLtJ_T0058203.1 MGP_NODShiLtJ_G0026547.1 mouse_genomes_project 2 174325129 174347194 - MGP_NODShiLtJ_P0058203 Eif2s2 protein_coding protein_coding MGP_NODShiLtJ_T0058204.1 MGP_NODShiLtJ_G0026547.1 mouse_genomes_project 2 174338356 174347243 - Eif2s2 protein_coding retained_intron MGP_NODShiLtJ_T0058205.1 MGP_NODShiLtJ_G0026547.1 mouse_genomes_project 2 174338388 174347207 - MGP_NODShiLtJ_P0058205 Eif2s2 protein_coding protein_coding MGP_NODShiLtJ_T0058206.1 MGP_NODShiLtJ_G0026547.1 mouse_genomes_project 2 174338391 174347220 - Eif2s2 protein_coding retained_intron MGP_NODShiLtJ_T0054820.1 MGP_NODShiLtJ_G0025633.1 mouse_genomes_project 2 76100203 76126432 + MGP_NODShiLtJ_P0054820 Dhrs9 protein_coding protein_coding MGP_NODShiLtJ_T0057563.1 MGP_NODShiLtJ_G0026366.1 mouse_genomes_project 2 149643434 149656020 - MGP_NODShiLtJ_P0057563 Lrrn4 protein_coding protein_coding MGP_NODShiLtJ_T0054897.1 MGP_NODShiLtJ_G0025650.1 mouse_genomes_project 2 77560388 77615119 + MGP_NODShiLtJ_P0054897 Gorasp2 protein_coding protein_coding MGP_NODShiLtJ_T0054898.1 MGP_NODShiLtJ_G0025650.1 mouse_genomes_project 2 77560388 77591593 + MGP_NODShiLtJ_P0054898 Gorasp2 protein_coding protein_coding MGP_NODShiLtJ_T0054899.1 MGP_NODShiLtJ_G0025650.1 mouse_genomes_project 2 77560388 77591575 + MGP_NODShiLtJ_P0054899 Gorasp2 protein_coding protein_coding MGP_NODShiLtJ_T0054900.1 MGP_NODShiLtJ_G0025650.1 mouse_genomes_project 2 77560402 77589210 + MGP_NODShiLtJ_P0054900 Gorasp2 protein_coding protein_coding MGP_NODShiLtJ_T0054901.1 MGP_NODShiLtJ_G0025650.1 mouse_genomes_project 2 77561012 77577800 + Gorasp2 protein_coding processed_transcript MGP_NODShiLtJ_T0054902.1 MGP_NODShiLtJ_G0025650.1 mouse_genomes_project 2 77587662 77591571 + Gorasp2 protein_coding processed_transcript MGP_NODShiLtJ_T0055566.1 MGP_NODShiLtJ_G0025889.1 mouse_genomes_project 2 98911847 99011207 - MGP_NODShiLtJ_P0055566 protein_coding protein_coding MGP_NODShiLtJ_T0053143.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26720541 26732973 - MGP_NODShiLtJ_P0053143 Rexo4 protein_coding protein_coding MGP_NODShiLtJ_T0053144.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26720544 26732973 - MGP_NODShiLtJ_P0053144 Rexo4 protein_coding protein_coding MGP_NODShiLtJ_T0053145.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26721195 26723456 - Rexo4 protein_coding processed_transcript MGP_NODShiLtJ_T0053146.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26721297 26722554 - Rexo4 protein_coding processed_transcript MGP_NODShiLtJ_T0053147.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26721410 26732866 - MGP_NODShiLtJ_P0053147 Rexo4 protein_coding protein_coding MGP_NODShiLtJ_T0053148.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26721870 26723189 - Rexo4 protein_coding processed_transcript MGP_NODShiLtJ_T0053149.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26723202 26732865 - Rexo4 protein_coding processed_transcript MGP_NODShiLtJ_T0053150.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26724905 26726874 - Rexo4 protein_coding processed_transcript MGP_NODShiLtJ_T0053151.1 MGP_NODShiLtJ_G0025342.1 mouse_genomes_project 2 26729486 26732911 - Rexo4 protein_coding processed_transcript MGP_NODShiLtJ_T0056708.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136108057 136163692 + Capn3 protein_coding processed_transcript MGP_NODShiLtJ_T0056709.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136108057 136163552 + Capn3 protein_coding processed_transcript MGP_NODShiLtJ_T0056710.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136115719 136163692 + MGP_NODShiLtJ_P0056710 Capn3 protein_coding protein_coding MGP_NODShiLtJ_T0056711.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136115719 136163692 + MGP_NODShiLtJ_P0056711 Capn3 protein_coding protein_coding MGP_NODShiLtJ_T0056712.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136116013 136163692 + MGP_NODShiLtJ_P0056712 Capn3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056713.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136133810 136163692 + MGP_NODShiLtJ_P0056713 Capn3 protein_coding protein_coding MGP_NODShiLtJ_T0056714.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136133812 136163692 + MGP_NODShiLtJ_P0056714 Capn3 protein_coding protein_coding MGP_NODShiLtJ_T0056715.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136133862 136163692 + MGP_NODShiLtJ_P0056715 Capn3 protein_coding protein_coding MGP_NODShiLtJ_T0056716.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136133868 136163293 + Capn3 protein_coding processed_transcript MGP_NODShiLtJ_T0056717.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136133868 136163692 + MGP_NODShiLtJ_P0056717 Capn3 protein_coding protein_coding MGP_NODShiLtJ_T0056718.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136142241 136142516 + Capn3 protein_coding processed_transcript MGP_NODShiLtJ_T0056719.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136159027 136161996 + Capn3 protein_coding processed_transcript MGP_NODShiLtJ_T0056720.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136160011 136161821 + Capn3 protein_coding processed_transcript MGP_NODShiLtJ_T0056721.1 MGP_NODShiLtJ_G0026183.1 mouse_genomes_project 2 136160085 136162174 + Capn3 protein_coding processed_transcript MGP_NODShiLtJ_T0098300.1 MGP_NODShiLtJ_G0036706.1 mouse_genomes_project 2 1241377 1243649 + Gm38348 sense_intronic sense_intronic MGP_NODShiLtJ_T0056555.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134743981 134745903 + Zfyve19 protein_coding processed_transcript MGP_NODShiLtJ_T0056556.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134744376 134745966 + Zfyve19 protein_coding processed_transcript MGP_NODShiLtJ_T0056557.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134744396 134747129 + Zfyve19 protein_coding processed_transcript MGP_NODShiLtJ_T0056558.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134744405 134746507 + Zfyve19 protein_coding retained_intron MGP_NODShiLtJ_T0056559.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134744494 134753176 + MGP_NODShiLtJ_P0056559 Zfyve19 protein_coding protein_coding MGP_NODShiLtJ_T0056560.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134746201 134751011 + Zfyve19 protein_coding retained_intron MGP_NODShiLtJ_T0056561.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134746825 134747083 + Zfyve19 protein_coding processed_transcript MGP_NODShiLtJ_T0056562.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134747004 134751033 + Zfyve19 protein_coding retained_intron MGP_NODShiLtJ_T0056563.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134750577 134752519 + Zfyve19 protein_coding retained_intron MGP_NODShiLtJ_T0056564.1 MGP_NODShiLtJ_G0026152.1 mouse_genomes_project 2 134752386 134753171 + Zfyve19 protein_coding retained_intron MGP_NODShiLtJ_T0058737.1 MGP_NODShiLtJ_G0026641.1 mouse_genomes_project 2 183619539 183634123 - MGP_NODShiLtJ_P0058737 Oser1 protein_coding protein_coding MGP_NODShiLtJ_T0058738.1 MGP_NODShiLtJ_G0026641.1 mouse_genomes_project 2 183619570 183640460 - MGP_NODShiLtJ_P0058738 Oser1 protein_coding protein_coding MGP_NODShiLtJ_T0058739.1 MGP_NODShiLtJ_G0026641.1 mouse_genomes_project 2 183620269 183633739 - Oser1 protein_coding processed_transcript MGP_NODShiLtJ_T0058740.1 MGP_NODShiLtJ_G0026641.1 mouse_genomes_project 2 183620303 183626328 - Oser1 protein_coding processed_transcript MGP_NODShiLtJ_T0058741.1 MGP_NODShiLtJ_G0026641.1 mouse_genomes_project 2 183620598 183640460 - Oser1 protein_coding processed_transcript MGP_NODShiLtJ_T0058742.1 MGP_NODShiLtJ_G0026641.1 mouse_genomes_project 2 183620787 183631770 - MGP_NODShiLtJ_P0058742 Oser1 protein_coding protein_coding MGP_NODShiLtJ_T0058743.1 MGP_NODShiLtJ_G0026641.1 mouse_genomes_project 2 183638639 183640313 - Oser1 protein_coding processed_transcript MGP_NODShiLtJ_T0055429.1 MGP_NODShiLtJ_G0025765.1 mouse_genomes_project 2 94519612 94520557 + MGP_NODShiLtJ_P0055429 Olfr998 protein_coding protein_coding MGP_NODShiLtJ_T0056295.1 MGP_NODShiLtJ_G0026064.1 mouse_genomes_project 2 124070062 124080211 + MGP_NODShiLtJ_P0056295 Lin7c protein_coding protein_coding MGP_NODShiLtJ_T0056296.1 MGP_NODShiLtJ_G0026064.1 mouse_genomes_project 2 124070079 124075944 + Lin7c protein_coding retained_intron MGP_NODShiLtJ_T0099109.1 MGP_NODShiLtJ_G0037503.1 mouse_genomes_project 2 59333580 59333721 + Gm25489 snRNA snRNA MGP_NODShiLtJ_T0058808.1 MGP_NODShiLtJ_G0026665.1 mouse_genomes_project 2 184619314 184622182 + MGP_NODShiLtJ_P0058808 Svs5 protein_coding protein_coding MGP_NODShiLtJ_T0058809.1 MGP_NODShiLtJ_G0026665.1 mouse_genomes_project 2 184621235 184622182 + MGP_NODShiLtJ_P0058809 Svs5 protein_coding protein_coding MGP_NODShiLtJ_T0013469.1 MGP_NODShiLtJ_G0011577.1 mouse_genomes_project 2 76535795 76536228 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013731.1 MGP_NODShiLtJ_G0011839.1 mouse_genomes_project 2 179753309 179754176 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055609.1 MGP_NODShiLtJ_G0025928.1 mouse_genomes_project 2 100061115 100061633 - protein_coding processed_transcript MGP_NODShiLtJ_T0007204.1 MGP_NODShiLtJ_G0005902.1 mouse_genomes_project 2 103764764 103781544 + Gm13816 lincRNA lincRNA MGP_NODShiLtJ_T0056887.1 MGP_NODShiLtJ_G0026206.1 mouse_genomes_project 2 137099778 137121632 - MGP_NODShiLtJ_P0056887 Catsper2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056888.1 MGP_NODShiLtJ_G0026206.1 mouse_genomes_project 2 137099781 137121800 - MGP_NODShiLtJ_P0056888 Catsper2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056889.1 MGP_NODShiLtJ_G0026206.1 mouse_genomes_project 2 137101503 137121815 - MGP_NODShiLtJ_P0056889 Catsper2 protein_coding protein_coding MGP_NODShiLtJ_T0056890.1 MGP_NODShiLtJ_G0026206.1 mouse_genomes_project 2 137101505 137104715 - Catsper2 protein_coding retained_intron MGP_NODShiLtJ_T0056891.1 MGP_NODShiLtJ_G0026206.1 mouse_genomes_project 2 137118418 137120307 - Catsper2 protein_coding retained_intron MGP_NODShiLtJ_T0056675.1 MGP_NODShiLtJ_G0026179.1 mouse_genomes_project 2 135937699 135950092 - Pla2g4f protein_coding retained_intron MGP_NODShiLtJ_T0056676.1 MGP_NODShiLtJ_G0026179.1 mouse_genomes_project 2 135937708 135951897 - MGP_NODShiLtJ_P0056676 Pla2g4f protein_coding protein_coding MGP_NODShiLtJ_T0052129.1 MGP_NODShiLtJ_G0025165.1 mouse_genomes_project 2 3090630 3142799 - MGP_NODShiLtJ_P0052129 Dhtkd1 protein_coding protein_coding MGP_NODShiLtJ_T0052130.1 MGP_NODShiLtJ_G0025165.1 mouse_genomes_project 2 3091291 3142750 - MGP_NODShiLtJ_P0052130 Dhtkd1 protein_coding protein_coding MGP_NODShiLtJ_T0052131.1 MGP_NODShiLtJ_G0025165.1 mouse_genomes_project 2 3098596 3108064 - Dhtkd1 protein_coding processed_transcript MGP_NODShiLtJ_T0099121.1 MGP_NODShiLtJ_G0037515.1 mouse_genomes_project 2 116022042 116022149 + Gm23731 snRNA snRNA MGP_NODShiLtJ_T0004013.1 MGP_NODShiLtJ_G0003553.1 mouse_genomes_project 2 134335749 134339918 - Gm14091 antisense antisense MGP_NODShiLtJ_T0058186.1 MGP_NODShiLtJ_G0026543.1 mouse_genomes_project 2 174085324 174136276 + Chmp4b protein_coding processed_transcript MGP_NODShiLtJ_T0058187.1 MGP_NODShiLtJ_G0026543.1 mouse_genomes_project 2 174092707 174136281 + MGP_NODShiLtJ_P0058187 Chmp4b protein_coding protein_coding MGP_NODShiLtJ_T0058188.1 MGP_NODShiLtJ_G0026543.1 mouse_genomes_project 2 174130417 174135777 + Chmp4b protein_coding retained_intron MGP_NODShiLtJ_T0007337.1 MGP_NODShiLtJ_G0006009.1 mouse_genomes_project 2 187004855 187018504 + 5031425F14Rik lincRNA lincRNA MGP_NODShiLtJ_T0007210.1 MGP_NODShiLtJ_G0005905.1 mouse_genomes_project 2 105402211 105416347 - lincRNA lincRNA MGP_NODShiLtJ_T0007211.1 MGP_NODShiLtJ_G0005905.1 mouse_genomes_project 2 105411274 105416366 - lincRNA lincRNA MGP_NODShiLtJ_T0058698.1 MGP_NODShiLtJ_G0026631.1 mouse_genomes_project 2 181587213 182808674 - MGP_NODShiLtJ_P0058698 Ptprt protein_coding protein_coding MGP_NODShiLtJ_T0058699.1 MGP_NODShiLtJ_G0026631.1 mouse_genomes_project 2 181587213 182808674 - MGP_NODShiLtJ_P0058699 Ptprt protein_coding protein_coding MGP_NODShiLtJ_T0058700.1 MGP_NODShiLtJ_G0026631.1 mouse_genomes_project 2 181591566 182808621 - MGP_NODShiLtJ_P0058700 Ptprt protein_coding protein_coding MGP_NODShiLtJ_T0058701.1 MGP_NODShiLtJ_G0026631.1 mouse_genomes_project 2 181592718 182808674 - MGP_NODShiLtJ_P0058701 Ptprt protein_coding protein_coding MGP_NODShiLtJ_T0058702.1 MGP_NODShiLtJ_G0026631.1 mouse_genomes_project 2 181770722 181891735 - Ptprt protein_coding processed_transcript MGP_NODShiLtJ_T0058703.1 MGP_NODShiLtJ_G0026631.1 mouse_genomes_project 2 182119917 182263894 - Ptprt protein_coding processed_transcript MGP_NODShiLtJ_T0059443.1 MGP_NODShiLtJ_G0026817.1 mouse_genomes_project 2 202250451 202258017 + MGP_NODShiLtJ_P0059443 Gid8 protein_coding protein_coding MGP_NODShiLtJ_T0059444.1 MGP_NODShiLtJ_G0026817.1 mouse_genomes_project 2 202252021 202255074 + Gid8 protein_coding processed_transcript MGP_NODShiLtJ_T0059445.1 MGP_NODShiLtJ_G0026817.1 mouse_genomes_project 2 202252880 202258014 + MGP_NODShiLtJ_P0059445 Gid8 protein_coding protein_coding MGP_NODShiLtJ_T0056976.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179390 138199898 - MGP_NODShiLtJ_P0056976 protein_coding protein_coding MGP_NODShiLtJ_T0056977.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179391 138201985 - MGP_NODShiLtJ_P0056977 protein_coding protein_coding MGP_NODShiLtJ_T0056978.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179626 138202229 - MGP_NODShiLtJ_P0056978 protein_coding protein_coding MGP_NODShiLtJ_T0056979.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179626 138192618 - MGP_NODShiLtJ_P0056979 protein_coding protein_coding MGP_NODShiLtJ_T0056980.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179626 138201899 - MGP_NODShiLtJ_P0056980 protein_coding protein_coding MGP_NODShiLtJ_T0056981.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179697 138191279 - MGP_NODShiLtJ_P0056981 protein_coding protein_coding MGP_NODShiLtJ_T0056982.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179697 138191305 - MGP_NODShiLtJ_P0056982 protein_coding protein_coding MGP_NODShiLtJ_T0056983.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179851 138202199 - MGP_NODShiLtJ_P0056983 protein_coding protein_coding MGP_NODShiLtJ_T0056984.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138179886 138190259 - MGP_NODShiLtJ_P0056984 protein_coding protein_coding MGP_NODShiLtJ_T0056985.1 MGP_NODShiLtJ_G0026231.1 mouse_genomes_project 2 138180002 138187152 - protein_coding retained_intron MGP_NODShiLtJ_T0057266.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145684420 145690980 + MGP_NODShiLtJ_P0057266 Slc20a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0057267.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145684437 145698284 + MGP_NODShiLtJ_P0057267 Slc20a1 protein_coding protein_coding MGP_NODShiLtJ_T0057268.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145684474 145687844 + Slc20a1 protein_coding retained_intron MGP_NODShiLtJ_T0057269.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145684476 145691771 + Slc20a1 protein_coding processed_transcript MGP_NODShiLtJ_T0057270.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145684476 145687842 + Slc20a1 protein_coding retained_intron MGP_NODShiLtJ_T0057271.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145684817 145686482 + MGP_NODShiLtJ_P0057271 Slc20a1 protein_coding protein_coding MGP_NODShiLtJ_T0057272.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145684983 145698277 + MGP_NODShiLtJ_P0057272 Slc20a1 protein_coding protein_coding MGP_NODShiLtJ_T0057273.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145692987 145694926 + Slc20a1 protein_coding retained_intron MGP_NODShiLtJ_T0057274.1 MGP_NODShiLtJ_G0026302.1 mouse_genomes_project 2 145694027 145694694 + Slc20a1 protein_coding retained_intron MGP_NODShiLtJ_T0007199.1 MGP_NODShiLtJ_G0005897.1 mouse_genomes_project 2 102118432 102123686 - Gm17281 lincRNA lincRNA MGP_NODShiLtJ_T0013498.1 MGP_NODShiLtJ_G0011606.1 mouse_genomes_project 2 86277773 86278271 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010298.1 MGP_NODShiLtJ_G0008431.1 mouse_genomes_project 2 32562943 32563053 + Mir199b miRNA miRNA MGP_NODShiLtJ_T0007254.1 MGP_NODShiLtJ_G0005940.1 mouse_genomes_project 2 133741558 133747512 - A930104D05Rik lincRNA lincRNA MGP_NODShiLtJ_T0007255.1 MGP_NODShiLtJ_G0005940.1 mouse_genomes_project 2 133744348 133747344 - A930104D05Rik lincRNA lincRNA MGP_NODShiLtJ_T0013326.1 MGP_NODShiLtJ_G0011434.1 mouse_genomes_project 2 17016809 17017288 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007225.1 MGP_NODShiLtJ_G0005916.1 mouse_genomes_project 2 118842899 118843756 + 4930527A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0052755.1 MGP_NODShiLtJ_G0025270.1 mouse_genomes_project 2 24896806 24897660 + MGP_NODShiLtJ_P0052755 Tmem203 protein_coding protein_coding MGP_NODShiLtJ_T0099132.1 MGP_NODShiLtJ_G0037526.1 mouse_genomes_project 2 145804106 145804257 - Gm25703 snRNA snRNA MGP_NODShiLtJ_T0101785.1 MGP_NODShiLtJ_G0039953.1 mouse_genomes_project 2 23794963 23799825 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0052472.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 18882955 19791603 + MGP_NODShiLtJ_P0052472 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052473.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19312889 19703763 + MGP_NODShiLtJ_P0052473 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052474.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19312889 19858982 + MGP_NODShiLtJ_P0052474 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052475.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19362748 19703629 + MGP_NODShiLtJ_P0052475 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052476.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19539781 19858971 + MGP_NODShiLtJ_P0052476 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052477.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19539781 19858971 + MGP_NODShiLtJ_P0052477 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052478.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19551188 19858332 + MGP_NODShiLtJ_P0052478 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052479.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19551208 19756733 + Etl4 protein_coding retained_intron MGP_NODShiLtJ_T0052480.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19551225 19858983 + MGP_NODShiLtJ_P0052480 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052481.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19580939 19754351 + Etl4 protein_coding processed_transcript MGP_NODShiLtJ_T0052482.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19580981 19704027 + Etl4 protein_coding processed_transcript MGP_NODShiLtJ_T0052483.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19593867 19754441 + Etl4 protein_coding processed_transcript MGP_NODShiLtJ_T0052484.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19758165 19790773 + Etl4 protein_coding processed_transcript MGP_NODShiLtJ_T0052485.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19767438 19851877 + Etl4 protein_coding retained_intron MGP_NODShiLtJ_T0052486.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19767438 19833513 + Etl4 protein_coding retained_intron MGP_NODShiLtJ_T0052487.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19767685 19856637 + MGP_NODShiLtJ_P0052487 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052488.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19782769 19858801 + MGP_NODShiLtJ_P0052488 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052489.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19782769 19859160 + MGP_NODShiLtJ_P0052489 Etl4 protein_coding protein_coding MGP_NODShiLtJ_T0052490.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19847160 19857328 + Etl4 protein_coding processed_transcript MGP_NODShiLtJ_T0052491.1 MGP_NODShiLtJ_G0025223.1 mouse_genomes_project 2 19855900 19858971 + Etl4 protein_coding retained_intron MGP_NODShiLtJ_T0057956.1 MGP_NODShiLtJ_G0026470.1 mouse_genomes_project 2 171234273 171239449 + Srxn1 protein_coding processed_transcript MGP_NODShiLtJ_T0057957.1 MGP_NODShiLtJ_G0026470.1 mouse_genomes_project 2 171234273 171239337 + Srxn1 protein_coding processed_transcript MGP_NODShiLtJ_T0057958.1 MGP_NODShiLtJ_G0026470.1 mouse_genomes_project 2 171234281 171241505 + MGP_NODShiLtJ_P0057958 Srxn1 protein_coding protein_coding MGP_NODShiLtJ_T0100421.1 MGP_NODShiLtJ_G0038815.1 mouse_genomes_project 2 180977814 180977939 + Gm25561 snoRNA snoRNA MGP_NODShiLtJ_T0098307.1 MGP_NODShiLtJ_G0036713.1 mouse_genomes_project 2 146006893 146030388 - Gm14040 sense_intronic sense_intronic MGP_NODShiLtJ_T0056108.1 MGP_NODShiLtJ_G0026027.1 mouse_genomes_project 2 116574978 116622970 + MGP_NODShiLtJ_P0056108 Elf5 protein_coding protein_coding MGP_NODShiLtJ_T0056109.1 MGP_NODShiLtJ_G0026027.1 mouse_genomes_project 2 116575003 116616396 + Elf5 protein_coding retained_intron MGP_NODShiLtJ_T0056110.1 MGP_NODShiLtJ_G0026027.1 mouse_genomes_project 2 116593241 116622973 + MGP_NODShiLtJ_P0056110 Elf5 protein_coding protein_coding MGP_NODShiLtJ_T0056111.1 MGP_NODShiLtJ_G0026027.1 mouse_genomes_project 2 116593305 116620853 + MGP_NODShiLtJ_P0056111 Elf5 protein_coding protein_coding MGP_NODShiLtJ_T0056112.1 MGP_NODShiLtJ_G0026027.1 mouse_genomes_project 2 116594007 116620141 + MGP_NODShiLtJ_P0056112 Elf5 protein_coding protein_coding MGP_NODShiLtJ_T0056113.1 MGP_NODShiLtJ_G0026027.1 mouse_genomes_project 2 116617988 116620125 + Elf5 protein_coding processed_transcript MGP_NODShiLtJ_T0056114.1 MGP_NODShiLtJ_G0026027.1 mouse_genomes_project 2 116619847 116621807 + Elf5 protein_coding processed_transcript MGP_NODShiLtJ_T0010238.1 MGP_NODShiLtJ_G0008371.1 mouse_genomes_project 2 8306490 8306611 + Mir669f miRNA miRNA MGP_NODShiLtJ_T0052174.1 MGP_NODShiLtJ_G0025171.1 mouse_genomes_project 2 7675013 7698720 - MGP_NODShiLtJ_P0052174 Gata3 protein_coding protein_coding MGP_NODShiLtJ_T0052175.1 MGP_NODShiLtJ_G0025171.1 mouse_genomes_project 2 7682544 7693798 - Gata3 protein_coding processed_transcript MGP_NODShiLtJ_T0052176.1 MGP_NODShiLtJ_G0025171.1 mouse_genomes_project 2 7694612 7695525 - Gata3 protein_coding processed_transcript MGP_NODShiLtJ_T0052177.1 MGP_NODShiLtJ_G0025171.1 mouse_genomes_project 2 7694827 7710154 - MGP_NODShiLtJ_P0052177 Gata3 protein_coding protein_coding MGP_NODShiLtJ_T0052178.1 MGP_NODShiLtJ_G0025171.1 mouse_genomes_project 2 7697960 7707904 - Gata3 protein_coding processed_transcript MGP_NODShiLtJ_T0052179.1 MGP_NODShiLtJ_G0025171.1 mouse_genomes_project 2 7698015 7710122 - Gata3 protein_coding processed_transcript MGP_NODShiLtJ_T0101815.1 MGP_NODShiLtJ_G0039983.1 mouse_genomes_project 2 95908026 95908897 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059358.1 MGP_NODShiLtJ_G0026798.1 mouse_genomes_project 2 201524250 201534706 + MGP_NODShiLtJ_P0059358 Lsm14b protein_coding protein_coding MGP_NODShiLtJ_T0059359.1 MGP_NODShiLtJ_G0026798.1 mouse_genomes_project 2 201524449 201534713 + MGP_NODShiLtJ_P0059359 Lsm14b protein_coding protein_coding MGP_NODShiLtJ_T0059360.1 MGP_NODShiLtJ_G0026798.1 mouse_genomes_project 2 201527169 201533049 + Lsm14b protein_coding processed_transcript MGP_NODShiLtJ_T0013385.1 MGP_NODShiLtJ_G0011493.1 mouse_genomes_project 2 40067421 40068147 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055588.1 MGP_NODShiLtJ_G0025911.1 mouse_genomes_project 2 99529670 99530606 - MGP_NODShiLtJ_P0055588 Olfr1222 protein_coding protein_coding MGP_NODShiLtJ_T0055589.1 MGP_NODShiLtJ_G0025911.1 mouse_genomes_project 2 99529955 99530608 - MGP_NODShiLtJ_P0055589 Olfr1222 protein_coding protein_coding MGP_NODShiLtJ_T0013463.1 MGP_NODShiLtJ_G0011571.1 mouse_genomes_project 2 73350569 73351062 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053592.1 MGP_NODShiLtJ_G0025413.1 mouse_genomes_project 2 30915685 30965550 + MGP_NODShiLtJ_P0053592 Prrx2 protein_coding protein_coding MGP_NODShiLtJ_T0053593.1 MGP_NODShiLtJ_G0025413.1 mouse_genomes_project 2 30925768 30965579 + MGP_NODShiLtJ_P0053593 Prrx2 protein_coding protein_coding MGP_NODShiLtJ_T0053594.1 MGP_NODShiLtJ_G0025413.1 mouse_genomes_project 2 30926153 30962981 + Prrx2 protein_coding retained_intron MGP_NODShiLtJ_T0053595.1 MGP_NODShiLtJ_G0025413.1 mouse_genomes_project 2 30963642 30965448 + Prrx2 protein_coding retained_intron MGP_NODShiLtJ_T0059321.1 MGP_NODShiLtJ_G0026787.1 mouse_genomes_project 2 195838033 195841058 - MGP_NODShiLtJ_P0059321 Atp5e protein_coding protein_coding MGP_NODShiLtJ_T0059322.1 MGP_NODShiLtJ_G0026787.1 mouse_genomes_project 2 195838036 195841002 - Atp5e protein_coding retained_intron MGP_NODShiLtJ_T0059323.1 MGP_NODShiLtJ_G0026787.1 mouse_genomes_project 2 195839485 195841042 - Atp5e protein_coding retained_intron MGP_NODShiLtJ_T0056642.1 MGP_NODShiLtJ_G0026171.1 mouse_genomes_project 2 135586814 135640790 + MGP_NODShiLtJ_P0056642 Mapkbp1 protein_coding protein_coding MGP_NODShiLtJ_T0056643.1 MGP_NODShiLtJ_G0026171.1 mouse_genomes_project 2 135587169 135638752 + MGP_NODShiLtJ_P0056643 Mapkbp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056644.1 MGP_NODShiLtJ_G0026171.1 mouse_genomes_project 2 135624977 135626386 + Mapkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0056645.1 MGP_NODShiLtJ_G0026171.1 mouse_genomes_project 2 135626334 135628911 + Mapkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0056646.1 MGP_NODShiLtJ_G0026171.1 mouse_genomes_project 2 135635459 135636433 + Mapkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0052867.1 MGP_NODShiLtJ_G0025288.1 mouse_genomes_project 2 25155895 25158962 - MGP_NODShiLtJ_P0052867 Lcn12 protein_coding protein_coding MGP_NODShiLtJ_T0052868.1 MGP_NODShiLtJ_G0025288.1 mouse_genomes_project 2 25155897 25158484 - MGP_NODShiLtJ_P0052868 Lcn12 protein_coding protein_coding MGP_NODShiLtJ_T0003963.1 MGP_NODShiLtJ_G0003522.1 mouse_genomes_project 2 80838454 80840448 + Chn1os1 antisense antisense MGP_NODShiLtJ_T0055123.1 MGP_NODShiLtJ_G0025701.1 mouse_genomes_project 2 83799750 83813545 + MGP_NODShiLtJ_P0055123 Rbm45 protein_coding protein_coding MGP_NODShiLtJ_T0059280.1 MGP_NODShiLtJ_G0026778.1 mouse_genomes_project 2 195034254 195036939 + MGP_NODShiLtJ_P0059280 1700010B08Rik protein_coding protein_coding MGP_NODShiLtJ_T0053169.1 MGP_NODShiLtJ_G0025346.1 mouse_genomes_project 2 26824852 26837234 - MGP_NODShiLtJ_P0053169 Tmem8c protein_coding protein_coding MGP_NODShiLtJ_T0053170.1 MGP_NODShiLtJ_G0025346.1 mouse_genomes_project 2 26824854 26832925 - MGP_NODShiLtJ_P0053170 Tmem8c protein_coding protein_coding MGP_NODShiLtJ_T0004037.1 MGP_NODShiLtJ_G0003572.1 mouse_genomes_project 2 148866420 148946272 + Gm14051 antisense antisense MGP_NODShiLtJ_T0054290.1 MGP_NODShiLtJ_G0025545.1 mouse_genomes_project 2 39885958 39890003 - MGP_NODShiLtJ_P0054290 Rpl35 protein_coding protein_coding MGP_NODShiLtJ_T0054291.1 MGP_NODShiLtJ_G0025545.1 mouse_genomes_project 2 39885997 39889422 - Rpl35 protein_coding processed_transcript MGP_NODShiLtJ_T0054292.1 MGP_NODShiLtJ_G0025545.1 mouse_genomes_project 2 39888990 39889501 - Rpl35 protein_coding processed_transcript MGP_NODShiLtJ_T0053993.1 MGP_NODShiLtJ_G0025473.1 mouse_genomes_project 2 33892573 33969931 - MGP_NODShiLtJ_P0053993 Lmx1b protein_coding protein_coding MGP_NODShiLtJ_T0053994.1 MGP_NODShiLtJ_G0025473.1 mouse_genomes_project 2 33892884 33970031 - MGP_NODShiLtJ_P0053994 Lmx1b protein_coding protein_coding MGP_NODShiLtJ_T0053995.1 MGP_NODShiLtJ_G0025473.1 mouse_genomes_project 2 33895403 33961731 - Lmx1b protein_coding processed_transcript MGP_NODShiLtJ_T0013721.1 MGP_NODShiLtJ_G0011829.1 mouse_genomes_project 2 176449890 176463216 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057900.1 MGP_NODShiLtJ_G0026455.1 mouse_genomes_project 2 169997296 170013100 - MGP_NODShiLtJ_P0057900 Gm6741 protein_coding protein_coding MGP_NODShiLtJ_T0057902.1 MGP_NODShiLtJ_G0026455.1 mouse_genomes_project 2 169998368 170013059 - Gm6741 protein_coding processed_transcript MGP_NODShiLtJ_T0057903.1 MGP_NODShiLtJ_G0026457.1 mouse_genomes_project 2 170075349 170077396 - MGP_NODShiLtJ_P0057903 protein_coding protein_coding MGP_NODShiLtJ_T0013666.1 MGP_NODShiLtJ_G0011774.1 mouse_genomes_project 2 157761089 157761527 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013675.1 MGP_NODShiLtJ_G0011783.1 mouse_genomes_project 2 162127443 162127871 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054010.1 MGP_NODShiLtJ_G0025476.1 mouse_genomes_project 2 34795555 34893868 + MGP_NODShiLtJ_P0054010 Mapkap1 protein_coding protein_coding MGP_NODShiLtJ_T0054011.1 MGP_NODShiLtJ_G0025476.1 mouse_genomes_project 2 34795653 34823373 + MGP_NODShiLtJ_P0054011 Mapkap1 protein_coding protein_coding MGP_NODShiLtJ_T0054012.1 MGP_NODShiLtJ_G0025476.1 mouse_genomes_project 2 34795656 34872729 + Mapkap1 protein_coding processed_transcript MGP_NODShiLtJ_T0054013.1 MGP_NODShiLtJ_G0025476.1 mouse_genomes_project 2 34795658 35026551 + MGP_NODShiLtJ_P0054013 Mapkap1 protein_coding protein_coding MGP_NODShiLtJ_T0054014.1 MGP_NODShiLtJ_G0025476.1 mouse_genomes_project 2 34795662 35025155 + MGP_NODShiLtJ_P0054014 Mapkap1 protein_coding protein_coding MGP_NODShiLtJ_T0054015.1 MGP_NODShiLtJ_G0025476.1 mouse_genomes_project 2 34832000 34929756 + Mapkap1 protein_coding processed_transcript MGP_NODShiLtJ_T0054016.1 MGP_NODShiLtJ_G0025476.1 mouse_genomes_project 2 34837854 34894025 + MGP_NODShiLtJ_P0054016 Mapkap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054017.1 MGP_NODShiLtJ_G0025476.1 mouse_genomes_project 2 35021190 35025510 + Mapkap1 protein_coding processed_transcript MGP_NODShiLtJ_T0056046.1 MGP_NODShiLtJ_G0026015.1 mouse_genomes_project 2 114723472 114731265 + Traf6 protein_coding processed_transcript MGP_NODShiLtJ_T0056047.1 MGP_NODShiLtJ_G0026015.1 mouse_genomes_project 2 114723483 114746691 + MGP_NODShiLtJ_P0056047 Traf6 protein_coding protein_coding MGP_NODShiLtJ_T0056048.1 MGP_NODShiLtJ_G0026015.1 mouse_genomes_project 2 114729244 114735115 + Traf6 protein_coding processed_transcript MGP_NODShiLtJ_T0058972.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185689390 185724060 - MGP_NODShiLtJ_P0058972 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0058973.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185690514 185698230 - MGP_NODShiLtJ_P0058973 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0058974.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185690514 185729713 - MGP_NODShiLtJ_P0058974 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0058975.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185690514 185729713 - MGP_NODShiLtJ_P0058975 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0058976.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185692471 185729713 - MGP_NODShiLtJ_P0058976 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0058977.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185692476 185720153 - MGP_NODShiLtJ_P0058977 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0058978.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185699531 185717556 - Elmo2 protein_coding processed_transcript MGP_NODShiLtJ_T0058979.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185699920 185713003 - MGP_NODShiLtJ_P0058979 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0058980.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185705946 185712893 - Elmo2 protein_coding retained_intron MGP_NODShiLtJ_T0058981.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185710163 185719601 - MGP_NODShiLtJ_P0058981 Elmo2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058982.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185712930 185719825 - MGP_NODShiLtJ_P0058982 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0058983.1 MGP_NODShiLtJ_G0026708.1 mouse_genomes_project 2 185718921 185729713 - MGP_NODShiLtJ_P0058983 Elmo2 protein_coding protein_coding MGP_NODShiLtJ_T0053102.1 MGP_NODShiLtJ_G0025334.1 mouse_genomes_project 2 26598121 26612898 - MGP_NODShiLtJ_P0053102 Abo protein_coding protein_coding MGP_NODShiLtJ_T0053103.1 MGP_NODShiLtJ_G0025334.1 mouse_genomes_project 2 26598121 26623091 - MGP_NODShiLtJ_P0053103 Abo protein_coding protein_coding MGP_NODShiLtJ_T0004080.1 MGP_NODShiLtJ_G0003604.1 mouse_genomes_project 2 175121154 175122854 + Gssos2 antisense antisense MGP_NODShiLtJ_T0004081.1 MGP_NODShiLtJ_G0003604.1 mouse_genomes_project 2 175121910 175122840 + Gssos2 antisense antisense MGP_NODShiLtJ_T0013497.1 MGP_NODShiLtJ_G0011605.1 mouse_genomes_project 2 86218417 86219618 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007174.1 MGP_NODShiLtJ_G0005876.1 mouse_genomes_project 2 81368587 81369137 + Gm28640 lincRNA lincRNA MGP_NODShiLtJ_T0055356.1 MGP_NODShiLtJ_G0025740.1 mouse_genomes_project 2 93477261 93486818 + MGP_NODShiLtJ_P0055356 Med19 protein_coding protein_coding MGP_NODShiLtJ_T0055357.1 MGP_NODShiLtJ_G0025740.1 mouse_genomes_project 2 93484235 93486102 + Med19 protein_coding processed_transcript MGP_NODShiLtJ_T0010282.1 MGP_NODShiLtJ_G0008415.1 mouse_genomes_project 2 26211490 26211551 - Mir6996 miRNA miRNA MGP_NODShiLtJ_T0013684.1 MGP_NODShiLtJ_G0011792.1 mouse_genomes_project 2 164300688 164301303 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056781.1 MGP_NODShiLtJ_G0026192.1 mouse_genomes_project 2 136675931 136709361 + MGP_NODShiLtJ_P0056781 Tmem62 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056782.1 MGP_NODShiLtJ_G0026192.1 mouse_genomes_project 2 136676213 136709353 + MGP_NODShiLtJ_P0056782 Tmem62 protein_coding protein_coding MGP_NODShiLtJ_T0056783.1 MGP_NODShiLtJ_G0026192.1 mouse_genomes_project 2 136676584 136679455 + Tmem62 protein_coding retained_intron MGP_NODShiLtJ_T0056784.1 MGP_NODShiLtJ_G0026192.1 mouse_genomes_project 2 136679919 136691333 + Tmem62 protein_coding processed_transcript MGP_NODShiLtJ_T0056785.1 MGP_NODShiLtJ_G0026192.1 mouse_genomes_project 2 136683205 136685794 + Tmem62 protein_coding processed_transcript MGP_NODShiLtJ_T0056786.1 MGP_NODShiLtJ_G0026192.1 mouse_genomes_project 2 136697244 136708552 + Tmem62 protein_coding retained_intron MGP_NODShiLtJ_T0010268.1 MGP_NODShiLtJ_G0008401.1 mouse_genomes_project 2 8365836 8365926 + Gm24806 miRNA miRNA MGP_NODShiLtJ_T0007176.1 MGP_NODShiLtJ_G0005878.1 mouse_genomes_project 2 81541245 81550046 - 4930441J16Rik lincRNA lincRNA MGP_NODShiLtJ_T0013310.1 MGP_NODShiLtJ_G0011418.1 mouse_genomes_project 2 10451337 10451737 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058054.1 MGP_NODShiLtJ_G0026504.1 mouse_genomes_project 2 172244585 172269624 + MGP_NODShiLtJ_P0058054 Xkr7 protein_coding protein_coding MGP_NODShiLtJ_T0013587.1 MGP_NODShiLtJ_G0011695.1 mouse_genomes_project 2 118369873 118370295 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098309.1 MGP_NODShiLtJ_G0036715.1 mouse_genomes_project 2 163720249 163763242 + Gm14093 sense_intronic sense_intronic MGP_NODShiLtJ_T0054033.1 MGP_NODShiLtJ_G0025478.1 mouse_genomes_project 2 35194027 35199605 + MGP_NODShiLtJ_P0054033 Hspa5 protein_coding protein_coding MGP_NODShiLtJ_T0054034.1 MGP_NODShiLtJ_G0025478.1 mouse_genomes_project 2 35194152 35198589 + MGP_NODShiLtJ_P0054034 Hspa5 protein_coding protein_coding MGP_NODShiLtJ_T0054035.1 MGP_NODShiLtJ_G0025478.1 mouse_genomes_project 2 35194156 35195365 + MGP_NODShiLtJ_P0054035 Hspa5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054036.1 MGP_NODShiLtJ_G0025478.1 mouse_genomes_project 2 35194638 35196250 + Hspa5 protein_coding retained_intron MGP_NODShiLtJ_T0054037.1 MGP_NODShiLtJ_G0025478.1 mouse_genomes_project 2 35195723 35196391 + Hspa5 protein_coding retained_intron MGP_NODShiLtJ_T0054038.1 MGP_NODShiLtJ_G0025478.1 mouse_genomes_project 2 35196904 35197673 + Hspa5 protein_coding retained_intron MGP_NODShiLtJ_T0056420.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131080146 131291443 - MGP_NODShiLtJ_P0056420 Meis2 protein_coding protein_coding MGP_NODShiLtJ_T0056421.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131080146 131291443 - MGP_NODShiLtJ_P0056421 Meis2 protein_coding protein_coding MGP_NODShiLtJ_T0056422.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131080146 131290646 - MGP_NODShiLtJ_P0056422 Meis2 protein_coding protein_coding MGP_NODShiLtJ_T0056423.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131080146 131290646 - MGP_NODShiLtJ_P0056423 Meis2 protein_coding protein_coding MGP_NODShiLtJ_T0056424.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131080226 131290320 - MGP_NODShiLtJ_P0056424 Meis2 protein_coding protein_coding MGP_NODShiLtJ_T0056425.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131080381 131289792 - MGP_NODShiLtJ_P0056425 Meis2 protein_coding protein_coding MGP_NODShiLtJ_T0056426.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131080984 131090025 - Meis2 protein_coding processed_transcript MGP_NODShiLtJ_T0056427.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131081307 131085940 - Meis2 protein_coding retained_intron MGP_NODShiLtJ_T0056428.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131081353 131264507 - Meis2 protein_coding processed_transcript MGP_NODShiLtJ_T0056429.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131081398 131089936 - Meis2 protein_coding processed_transcript MGP_NODShiLtJ_T0056430.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131081539 131090025 - Meis2 protein_coding processed_transcript MGP_NODShiLtJ_T0056431.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131081948 131090044 - Meis2 protein_coding retained_intron MGP_NODShiLtJ_T0056432.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131083952 131090028 - Meis2 protein_coding processed_transcript MGP_NODShiLtJ_T0056433.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131139029 131273410 - Meis2 protein_coding processed_transcript MGP_NODShiLtJ_T0056434.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131216074 131287808 - Meis2 protein_coding retained_intron MGP_NODShiLtJ_T0056435.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131260210 131272942 - Meis2 protein_coding retained_intron MGP_NODShiLtJ_T0056436.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131272813 131288868 - Meis2 protein_coding processed_transcript MGP_NODShiLtJ_T0056437.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131272813 131287978 - Meis2 protein_coding processed_transcript MGP_NODShiLtJ_T0056438.1 MGP_NODShiLtJ_G0026122.1 mouse_genomes_project 2 131272836 131284287 - Meis2 protein_coding retained_intron MGP_NODShiLtJ_T0004014.1 MGP_NODShiLtJ_G0003554.1 mouse_genomes_project 2 134516606 134520257 + Gm14089 antisense antisense MGP_NODShiLtJ_T0054941.1 MGP_NODShiLtJ_G0025656.1 mouse_genomes_project 2 78202780 78312772 - MGP_NODShiLtJ_P0054941 Slc25a12 protein_coding protein_coding MGP_NODShiLtJ_T0054942.1 MGP_NODShiLtJ_G0025656.1 mouse_genomes_project 2 78207743 78312556 - MGP_NODShiLtJ_P0054942 Slc25a12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054943.1 MGP_NODShiLtJ_G0025656.1 mouse_genomes_project 2 78208130 78231281 - Slc25a12 protein_coding processed_transcript MGP_NODShiLtJ_T0054944.1 MGP_NODShiLtJ_G0025656.1 mouse_genomes_project 2 78213408 78216585 - Slc25a12 protein_coding retained_intron MGP_NODShiLtJ_T0054945.1 MGP_NODShiLtJ_G0025656.1 mouse_genomes_project 2 78249589 78266555 - Slc25a12 protein_coding processed_transcript MGP_NODShiLtJ_T0054946.1 MGP_NODShiLtJ_G0025656.1 mouse_genomes_project 2 78267451 78286300 - Slc25a12 protein_coding processed_transcript MGP_NODShiLtJ_T0054947.1 MGP_NODShiLtJ_G0025656.1 mouse_genomes_project 2 78286157 78290101 - Slc25a12 protein_coding processed_transcript MGP_NODShiLtJ_T0001003.1 MGP_NODShiLtJ_G0000929.1 mouse_genomes_project 2 9086470 9089142 - TEC TEC MGP_NODShiLtJ_T0053947.1 MGP_NODShiLtJ_G0025466.1 mouse_genomes_project 2 33249212 33252574 + MGP_NODShiLtJ_P0053947 Rpl12 protein_coding protein_coding MGP_NODShiLtJ_T0053948.1 MGP_NODShiLtJ_G0025466.1 mouse_genomes_project 2 33249373 33253423 + Rpl12 protein_coding retained_intron MGP_NODShiLtJ_T0053949.1 MGP_NODShiLtJ_G0025466.1 mouse_genomes_project 2 33249382 33252123 + Rpl12 protein_coding retained_intron MGP_NODShiLtJ_T0053950.1 MGP_NODShiLtJ_G0025466.1 mouse_genomes_project 2 33249385 33251016 + Rpl12 protein_coding retained_intron MGP_NODShiLtJ_T0053951.1 MGP_NODShiLtJ_G0025466.1 mouse_genomes_project 2 33249393 33251389 + Rpl12 protein_coding retained_intron MGP_NODShiLtJ_T0053952.1 MGP_NODShiLtJ_G0025466.1 mouse_genomes_project 2 33249393 33252121 + MGP_NODShiLtJ_P0053952 Rpl12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053953.1 MGP_NODShiLtJ_G0025466.1 mouse_genomes_project 2 33249456 33252074 + MGP_NODShiLtJ_P0053953 Rpl12 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053954.1 MGP_NODShiLtJ_G0025466.1 mouse_genomes_project 2 33249919 33251144 + Rpl12 protein_coding retained_intron MGP_NODShiLtJ_T0013751.1 MGP_NODShiLtJ_G0011859.1 mouse_genomes_project 2 189043605 189044035 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013669.1 MGP_NODShiLtJ_G0011777.1 mouse_genomes_project 2 159078110 159078895 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013617.1 MGP_NODShiLtJ_G0011725.1 mouse_genomes_project 2 134081322 134081807 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056801.1 MGP_NODShiLtJ_G0026195.1 mouse_genomes_project 2 136749837 136792975 - MGP_NODShiLtJ_P0056801 Tgm5 protein_coding protein_coding MGP_NODShiLtJ_T0056802.1 MGP_NODShiLtJ_G0026195.1 mouse_genomes_project 2 136778231 136792956 - Tgm5 protein_coding retained_intron MGP_NODShiLtJ_T0100391.1 MGP_NODShiLtJ_G0038785.1 mouse_genomes_project 2 135323541 135323670 - Gm25857 snoRNA snoRNA MGP_NODShiLtJ_T0058191.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242380 174321038 + MGP_NODShiLtJ_P0058191 Raly protein_coding protein_coding MGP_NODShiLtJ_T0058192.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242390 174316202 + MGP_NODShiLtJ_P0058192 Raly protein_coding protein_coding MGP_NODShiLtJ_T0058193.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242394 174321054 + MGP_NODShiLtJ_P0058193 Raly protein_coding protein_coding MGP_NODShiLtJ_T0058194.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242402 174314302 + MGP_NODShiLtJ_P0058194 Raly protein_coding protein_coding MGP_NODShiLtJ_T0058195.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242417 174321037 + MGP_NODShiLtJ_P0058195 Raly protein_coding protein_coding MGP_NODShiLtJ_T0058196.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242441 174321054 + MGP_NODShiLtJ_P0058196 Raly protein_coding protein_coding MGP_NODShiLtJ_T0058197.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242636 174316415 + MGP_NODShiLtJ_P0058197 Raly protein_coding protein_coding MGP_NODShiLtJ_T0058198.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242638 174300835 + Raly protein_coding processed_transcript MGP_NODShiLtJ_T0058199.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242653 174309730 + Raly protein_coding processed_transcript MGP_NODShiLtJ_T0058201.1 MGP_NODShiLtJ_G0026545.1 mouse_genomes_project 2 174242997 174309843 + Raly protein_coding processed_transcript MGP_NODShiLtJ_T0003841.1 MGP_NODShiLtJ_G0003431.1 mouse_genomes_project 2 7697381 7698989 + Gm13256 antisense antisense MGP_NODShiLtJ_T0052905.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25258108 25285984 - MGP_NODShiLtJ_P0052905 Rabl6 protein_coding protein_coding MGP_NODShiLtJ_T0052906.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25259201 25266747 - Rabl6 protein_coding processed_transcript MGP_NODShiLtJ_T0052907.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25259201 25285928 - Rabl6 protein_coding processed_transcript MGP_NODShiLtJ_T0052908.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25259225 25260151 - Rabl6 protein_coding processed_transcript MGP_NODShiLtJ_T0052909.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25260279 25260914 - Rabl6 protein_coding processed_transcript MGP_NODShiLtJ_T0052910.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25260764 25263682 - Rabl6 protein_coding processed_transcript MGP_NODShiLtJ_T0052911.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25263819 25265534 - Rabl6 protein_coding processed_transcript MGP_NODShiLtJ_T0052912.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25263901 25285948 - Rabl6 protein_coding processed_transcript MGP_NODShiLtJ_T0052913.1 MGP_NODShiLtJ_G0025296.1 mouse_genomes_project 2 25273926 25285919 - Rabl6 protein_coding processed_transcript MGP_NODShiLtJ_T0058788.1 MGP_NODShiLtJ_G0026655.1 mouse_genomes_project 2 184316030 184331039 - Tomm34 protein_coding retained_intron MGP_NODShiLtJ_T0058789.1 MGP_NODShiLtJ_G0026655.1 mouse_genomes_project 2 184316030 184336917 - MGP_NODShiLtJ_P0058789 Tomm34 protein_coding protein_coding MGP_NODShiLtJ_T0058790.1 MGP_NODShiLtJ_G0026655.1 mouse_genomes_project 2 184316030 184336850 - MGP_NODShiLtJ_P0058790 Tomm34 protein_coding protein_coding MGP_NODShiLtJ_T0013320.1 MGP_NODShiLtJ_G0011428.1 mouse_genomes_project 2 14407220 14407833 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007289.1 MGP_NODShiLtJ_G0005969.1 mouse_genomes_project 2 165856226 165857749 - Gm14110 lincRNA lincRNA MGP_NODShiLtJ_T0056964.1 MGP_NODShiLtJ_G0026226.1 mouse_genomes_project 2 138054653 138089597 + MGP_NODShiLtJ_P0056964 Sord protein_coding protein_coding MGP_NODShiLtJ_T0057175.1 MGP_NODShiLtJ_G0026276.1 mouse_genomes_project 2 143826318 143837199 + MGP_NODShiLtJ_P0057175 Gpat2 protein_coding protein_coding MGP_NODShiLtJ_T0010390.1 MGP_NODShiLtJ_G0008523.1 mouse_genomes_project 2 201907001 201907078 + Mir1a-1 miRNA miRNA MGP_NODShiLtJ_T0052843.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25119014 25124829 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052844.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25119014 25124077 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052851.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123326 25124194 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052852.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123358 25124971 - MGP_NODShiLtJ_P0052852 BC029214 protein_coding protein_coding MGP_NODShiLtJ_T0052853.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123360 25124949 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052854.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123361 25124156 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052855.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123361 25124541 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052856.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123407 25124885 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052857.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123437 25124842 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052858.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123691 25124908 - MGP_NODShiLtJ_P0052858 BC029214 protein_coding protein_coding MGP_NODShiLtJ_T0052859.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123888 25124900 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052860.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25123904 25124804 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0052861.1 MGP_NODShiLtJ_G0025285.1 mouse_genomes_project 2 25124135 25124825 - BC029214 protein_coding processed_transcript MGP_NODShiLtJ_T0003897.1 MGP_NODShiLtJ_G0003475.1 mouse_genomes_project 2 33156544 33158791 - Gm13523 antisense antisense MGP_NODShiLtJ_T0099102.1 MGP_NODShiLtJ_G0037496.1 mouse_genomes_project 2 35359686 35359790 + Gm24905 snRNA snRNA MGP_NODShiLtJ_T0007243.1 MGP_NODShiLtJ_G0005932.1 mouse_genomes_project 2 131293875 131312495 + G630016G05Rik lincRNA lincRNA MGP_NODShiLtJ_T0007244.1 MGP_NODShiLtJ_G0005932.1 mouse_genomes_project 2 131294561 131312494 + G630016G05Rik lincRNA lincRNA MGP_NODShiLtJ_T0055460.1 MGP_NODShiLtJ_G0025795.1 mouse_genomes_project 2 95396552 95397579 - MGP_NODShiLtJ_P0055460 Olfr1049 protein_coding protein_coding MGP_NODShiLtJ_T0010267.1 MGP_NODShiLtJ_G0008400.1 mouse_genomes_project 2 8365566 8365664 + Mir297a-4 miRNA miRNA MGP_NODShiLtJ_T0055358.1 MGP_NODShiLtJ_G0025741.1 mouse_genomes_project 2 93486572 93522861 - MGP_NODShiLtJ_P0055358 Zdhhc5 protein_coding protein_coding MGP_NODShiLtJ_T0055359.1 MGP_NODShiLtJ_G0025741.1 mouse_genomes_project 2 93518849 93522367 - Zdhhc5 protein_coding processed_transcript MGP_NODShiLtJ_T0055360.1 MGP_NODShiLtJ_G0025741.1 mouse_genomes_project 2 93518998 93522717 - Zdhhc5 protein_coding processed_transcript MGP_NODShiLtJ_T0010306.1 MGP_NODShiLtJ_G0008439.1 mouse_genomes_project 2 39479580 39479706 - Gm27634 miRNA miRNA MGP_NODShiLtJ_T0054039.1 MGP_NODShiLtJ_G0025479.1 mouse_genomes_project 2 35200943 35224681 - MGP_NODShiLtJ_P0054039 Rabepk protein_coding protein_coding MGP_NODShiLtJ_T0054040.1 MGP_NODShiLtJ_G0025479.1 mouse_genomes_project 2 35201274 35224531 - MGP_NODShiLtJ_P0054040 Rabepk protein_coding protein_coding MGP_NODShiLtJ_T0054041.1 MGP_NODShiLtJ_G0025479.1 mouse_genomes_project 2 35201485 35220222 - MGP_NODShiLtJ_P0054041 Rabepk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054042.1 MGP_NODShiLtJ_G0025479.1 mouse_genomes_project 2 35207630 35224777 - MGP_NODShiLtJ_P0054042 Rabepk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054043.1 MGP_NODShiLtJ_G0025479.1 mouse_genomes_project 2 35208022 35224814 - MGP_NODShiLtJ_P0054043 Rabepk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054044.1 MGP_NODShiLtJ_G0025479.1 mouse_genomes_project 2 35208494 35224667 - Rabepk protein_coding retained_intron MGP_NODShiLtJ_T0059313.1 MGP_NODShiLtJ_G0026784.1 mouse_genomes_project 2 195783292 195798872 + MGP_NODShiLtJ_P0059313 Nelfcd protein_coding protein_coding MGP_NODShiLtJ_T0059314.1 MGP_NODShiLtJ_G0026784.1 mouse_genomes_project 2 195783339 195798872 + MGP_NODShiLtJ_P0059314 Nelfcd protein_coding protein_coding MGP_NODShiLtJ_T0059315.1 MGP_NODShiLtJ_G0026784.1 mouse_genomes_project 2 195783368 195793921 + Nelfcd protein_coding processed_transcript MGP_NODShiLtJ_T0059316.1 MGP_NODShiLtJ_G0026784.1 mouse_genomes_project 2 195794640 195796211 + Nelfcd protein_coding retained_intron MGP_NODShiLtJ_T0059317.1 MGP_NODShiLtJ_G0026784.1 mouse_genomes_project 2 195795977 195797242 + Nelfcd protein_coding retained_intron MGP_NODShiLtJ_T0059318.1 MGP_NODShiLtJ_G0026784.1 mouse_genomes_project 2 195797656 195798764 + Nelfcd protein_coding retained_intron MGP_NODShiLtJ_T0013712.1 MGP_NODShiLtJ_G0011820.1 mouse_genomes_project 2 175003971 175004297 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053227.1 MGP_NODShiLtJ_G0025358.1 mouse_genomes_project 2 28335772 28341135 + Ppp1r26 protein_coding processed_transcript MGP_NODShiLtJ_T0053228.1 MGP_NODShiLtJ_G0025358.1 mouse_genomes_project 2 28335838 28341459 + Ppp1r26 protein_coding processed_transcript MGP_NODShiLtJ_T0053229.1 MGP_NODShiLtJ_G0025358.1 mouse_genomes_project 2 28336913 28341295 + Ppp1r26 protein_coding processed_transcript MGP_NODShiLtJ_T0053230.1 MGP_NODShiLtJ_G0025358.1 mouse_genomes_project 2 28336913 28346137 + MGP_NODShiLtJ_P0053230 Ppp1r26 protein_coding protein_coding MGP_NODShiLtJ_T0053231.1 MGP_NODShiLtJ_G0025358.1 mouse_genomes_project 2 28336913 28346134 + MGP_NODShiLtJ_P0053231 Ppp1r26 protein_coding protein_coding MGP_NODShiLtJ_T0056213.1 MGP_NODShiLtJ_G0026049.1 mouse_genomes_project 2 118435649 118437384 + MGP_NODShiLtJ_P0056213 Gm11060 protein_coding protein_coding MGP_NODShiLtJ_T0013674.1 MGP_NODShiLtJ_G0011782.1 mouse_genomes_project 2 161575765 161575915 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098310.1 MGP_NODShiLtJ_G0036716.1 mouse_genomes_project 2 180524498 180526334 + Gm14222 sense_intronic sense_intronic MGP_NODShiLtJ_T0056093.1 MGP_NODShiLtJ_G0026024.1 mouse_genomes_project 2 116158076 116210357 - MGP_NODShiLtJ_P0056093 Pdhx protein_coding protein_coding MGP_NODShiLtJ_T0056094.1 MGP_NODShiLtJ_G0026024.1 mouse_genomes_project 2 116170295 116210179 - MGP_NODShiLtJ_P0056094 Pdhx protein_coding protein_coding MGP_NODShiLtJ_T0056095.1 MGP_NODShiLtJ_G0026024.1 mouse_genomes_project 2 116176536 116210306 - MGP_NODShiLtJ_P0056095 Pdhx protein_coding protein_coding MGP_NODShiLtJ_T0013365.1 MGP_NODShiLtJ_G0011473.1 mouse_genomes_project 2 32660598 32661135 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013571.1 MGP_NODShiLtJ_G0011679.1 mouse_genomes_project 2 115265616 115266098 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010293.1 MGP_NODShiLtJ_G0008426.1 mouse_genomes_project 2 30786514 30786598 + Mir3089 miRNA miRNA MGP_NODShiLtJ_T0013401.1 MGP_NODShiLtJ_G0011509.1 mouse_genomes_project 2 48255453 48255866 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017749.1 MGP_NODShiLtJ_G0015352.1 mouse_genomes_project 2 177876111 177876863 + Gm20412 processed_transcript processed_transcript MGP_NODShiLtJ_T0010297.1 MGP_NODShiLtJ_G0008430.1 mouse_genomes_project 2 32562748 32562827 + Gm23363 miRNA miRNA MGP_NODShiLtJ_T0007279.1 MGP_NODShiLtJ_G0005960.1 mouse_genomes_project 2 152944444 152945427 - Gm14210 lincRNA lincRNA MGP_NODShiLtJ_T0013564.1 MGP_NODShiLtJ_G0011672.1 mouse_genomes_project 2 111049724 111050049 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000998.1 MGP_NODShiLtJ_G0000924.1 mouse_genomes_project 2 4216057 4227251 + TEC TEC MGP_NODShiLtJ_T0013465.1 MGP_NODShiLtJ_G0011573.1 mouse_genomes_project 2 74320747 74320830 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056284.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123799628 123855706 + MGP_NODShiLtJ_P0056284 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056285.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123800825 123855706 + MGP_NODShiLtJ_P0056285 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056286.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123800825 123855706 + MGP_NODShiLtJ_P0056286 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056287.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123800825 123855706 + MGP_NODShiLtJ_P0056287 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056288.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123801960 123855706 + MGP_NODShiLtJ_P0056288 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056289.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123817415 123855706 + MGP_NODShiLtJ_P0056289 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056290.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123818005 123855706 + MGP_NODShiLtJ_P0056290 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056291.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123818521 123855706 + MGP_NODShiLtJ_P0056291 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056292.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123819367 123855706 + MGP_NODShiLtJ_P0056292 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056293.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123819427 123855706 + MGP_NODShiLtJ_P0056293 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0056294.1 MGP_NODShiLtJ_G0026063.1 mouse_genomes_project 2 123838166 123855706 + MGP_NODShiLtJ_P0056294 Bdnf protein_coding protein_coding MGP_NODShiLtJ_T0057051.1 MGP_NODShiLtJ_G0026248.1 mouse_genomes_project 2 141874062 141920555 - MGP_NODShiLtJ_P0057051 Shc4 protein_coding protein_coding MGP_NODShiLtJ_T0057052.1 MGP_NODShiLtJ_G0026248.1 mouse_genomes_project 2 141874062 141971578 - MGP_NODShiLtJ_P0057052 Shc4 protein_coding protein_coding MGP_NODShiLtJ_T0057053.1 MGP_NODShiLtJ_G0026248.1 mouse_genomes_project 2 141875624 141920425 - MGP_NODShiLtJ_P0057053 Shc4 protein_coding protein_coding MGP_NODShiLtJ_T0057055.1 MGP_NODShiLtJ_G0026248.1 mouse_genomes_project 2 141938830 141972339 - Shc4 protein_coding retained_intron MGP_NODShiLtJ_T0007188.1 MGP_NODShiLtJ_G0005888.1 mouse_genomes_project 2 85378486 85380909 + Gm13661 lincRNA lincRNA MGP_NODShiLtJ_T0055585.1 MGP_NODShiLtJ_G0025908.1 mouse_genomes_project 2 99465225 99466210 - MGP_NODShiLtJ_P0055585 protein_coding protein_coding MGP_NODShiLtJ_T0001023.1 MGP_NODShiLtJ_G0000949.1 mouse_genomes_project 2 12366238 12366379 - TEC TEC MGP_NODShiLtJ_T0055581.1 MGP_NODShiLtJ_G0025904.1 mouse_genomes_project 2 99373881 99374820 - MGP_NODShiLtJ_P0055581 Olfr1215 protein_coding protein_coding MGP_NODShiLtJ_T0004021.1 MGP_NODShiLtJ_G0003561.1 mouse_genomes_project 2 143016569 143026451 + Gm27003 antisense antisense MGP_NODShiLtJ_T0059061.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187565481 187631715 - MGP_NODShiLtJ_P0059061 Stau1 protein_coding protein_coding MGP_NODShiLtJ_T0059062.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187566079 187573445 - Stau1 protein_coding retained_intron MGP_NODShiLtJ_T0059063.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187566079 187631702 - MGP_NODShiLtJ_P0059063 Stau1 protein_coding protein_coding MGP_NODShiLtJ_T0059064.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187566079 187631540 - MGP_NODShiLtJ_P0059064 Stau1 protein_coding protein_coding MGP_NODShiLtJ_T0059065.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187566205 187631736 - MGP_NODShiLtJ_P0059065 Stau1 protein_coding protein_coding MGP_NODShiLtJ_T0059066.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187567178 187569164 - Stau1 protein_coding retained_intron MGP_NODShiLtJ_T0059067.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187567224 187596577 - MGP_NODShiLtJ_P0059067 Stau1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059068.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187567626 187568889 - Stau1 protein_coding retained_intron MGP_NODShiLtJ_T0059069.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187570236 187578508 - Stau1 protein_coding retained_intron MGP_NODShiLtJ_T0059070.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187570839 187595302 - Stau1 protein_coding retained_intron MGP_NODShiLtJ_T0059071.1 MGP_NODShiLtJ_G0026723.1 mouse_genomes_project 2 187595367 187610563 - Stau1 protein_coding processed_transcript MGP_NODShiLtJ_T0007295.1 MGP_NODShiLtJ_G0005973.1 mouse_genomes_project 2 168033091 168037956 + Gm14135 lincRNA lincRNA MGP_NODShiLtJ_T0100403.1 MGP_NODShiLtJ_G0038797.1 mouse_genomes_project 2 162565112 162565250 - Gm26165 snoRNA snoRNA MGP_NODShiLtJ_T0053813.1 MGP_NODShiLtJ_G0025443.1 mouse_genomes_project 2 32633990 32637443 - MGP_NODShiLtJ_P0053813 Lcn2 protein_coding protein_coding MGP_NODShiLtJ_T0053814.1 MGP_NODShiLtJ_G0025443.1 mouse_genomes_project 2 32633997 32637087 - Lcn2 protein_coding processed_transcript MGP_NODShiLtJ_T0053815.1 MGP_NODShiLtJ_G0025443.1 mouse_genomes_project 2 32634003 32635364 - Lcn2 protein_coding retained_intron MGP_NODShiLtJ_T0053816.1 MGP_NODShiLtJ_G0025443.1 mouse_genomes_project 2 32634547 32635472 - Lcn2 protein_coding retained_intron MGP_NODShiLtJ_T0053817.1 MGP_NODShiLtJ_G0025443.1 mouse_genomes_project 2 32634809 32637617 - MGP_NODShiLtJ_P0053817 Lcn2 protein_coding protein_coding MGP_NODShiLtJ_T0053818.1 MGP_NODShiLtJ_G0025443.1 mouse_genomes_project 2 32635920 32637124 - Lcn2 protein_coding retained_intron MGP_NODShiLtJ_T0099136.1 MGP_NODShiLtJ_G0037530.1 mouse_genomes_project 2 153163258 153163359 - Gm26227 snRNA snRNA MGP_NODShiLtJ_T0059561.1 MGP_NODShiLtJ_G0026837.1 mouse_genomes_project 2 202950802 202967845 + MGP_NODShiLtJ_P0059561 Zgpat protein_coding protein_coding MGP_NODShiLtJ_T0059562.1 MGP_NODShiLtJ_G0026837.1 mouse_genomes_project 2 202951279 202967833 + MGP_NODShiLtJ_P0059562 Zgpat protein_coding protein_coding MGP_NODShiLtJ_T0059563.1 MGP_NODShiLtJ_G0026837.1 mouse_genomes_project 2 202951297 202970679 + MGP_NODShiLtJ_P0059563 Zgpat protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059564.1 MGP_NODShiLtJ_G0026837.1 mouse_genomes_project 2 202951326 202970677 + Zgpat protein_coding retained_intron MGP_NODShiLtJ_T0059565.1 MGP_NODShiLtJ_G0026837.1 mouse_genomes_project 2 202965444 202966870 + Zgpat protein_coding retained_intron MGP_NODShiLtJ_T0059566.1 MGP_NODShiLtJ_G0026837.1 mouse_genomes_project 2 202966689 202967789 + MGP_NODShiLtJ_P0059566 Zgpat protein_coding protein_coding MGP_NODShiLtJ_T0057817.1 MGP_NODShiLtJ_G0026425.1 mouse_genomes_project 2 167062920 167069830 - MGP_NODShiLtJ_P0057817 Cd93 protein_coding protein_coding MGP_NODShiLtJ_T0001064.1 MGP_NODShiLtJ_G0000990.1 mouse_genomes_project 2 86631482 86776027 + TEC TEC MGP_NODShiLtJ_T0010232.1 MGP_NODShiLtJ_G0008365.1 mouse_genomes_project 2 22699 22806 + Gm27306 miRNA miRNA MGP_NODShiLtJ_T0099092.1 MGP_NODShiLtJ_G0037486.1 mouse_genomes_project 2 16913264 16913369 + Gm25147 snRNA snRNA MGP_NODShiLtJ_T0003856.1 MGP_NODShiLtJ_G0003444.1 mouse_genomes_project 2 19443029 19454413 - Gm13335 antisense antisense MGP_NODShiLtJ_T0052320.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11196345 11399166 - MGP_NODShiLtJ_P0052320 Rsu1 protein_coding protein_coding MGP_NODShiLtJ_T0052321.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11196536 11399248 - MGP_NODShiLtJ_P0052321 Rsu1 protein_coding protein_coding MGP_NODShiLtJ_T0052322.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11196719 11399227 - MGP_NODShiLtJ_P0052322 Rsu1 protein_coding protein_coding MGP_NODShiLtJ_T0052323.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11294077 11399141 - Rsu1 protein_coding retained_intron MGP_NODShiLtJ_T0052324.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11344254 11399166 - Rsu1 protein_coding retained_intron MGP_NODShiLtJ_T0052325.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11345024 11399103 - MGP_NODShiLtJ_P0052325 Rsu1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052326.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11346847 11399054 - Rsu1 protein_coding retained_intron MGP_NODShiLtJ_T0052327.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11347360 11399124 - MGP_NODShiLtJ_P0052327 Rsu1 protein_coding protein_coding MGP_NODShiLtJ_T0052328.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11395293 11399144 - Rsu1 protein_coding retained_intron MGP_NODShiLtJ_T0052329.1 MGP_NODShiLtJ_G0025192.1 mouse_genomes_project 2 11398592 11399129 - Rsu1 protein_coding retained_intron MGP_NODShiLtJ_T0057277.1 MGP_NODShiLtJ_G0026304.1 mouse_genomes_project 2 145786789 145798797 - MGP_NODShiLtJ_P0057277 Il1a protein_coding protein_coding MGP_NODShiLtJ_T0058704.1 MGP_NODShiLtJ_G0026632.1 mouse_genomes_project 2 183087785 183088340 - MGP_NODShiLtJ_P0058704 Cisd3 protein_coding protein_coding MGP_NODShiLtJ_T0101318.1 MGP_NODShiLtJ_G0039571.1 mouse_genomes_project 2 98824903 98825943 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0007119.1 MGP_NODShiLtJ_G0005831.1 mouse_genomes_project 2 34277443 34283773 - Gm13403 lincRNA lincRNA MGP_NODShiLtJ_T0007120.1 MGP_NODShiLtJ_G0005831.1 mouse_genomes_project 2 34279554 34283805 - Gm13403 lincRNA lincRNA MGP_NODShiLtJ_T0055866.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102881752 102917147 - MGP_NODShiLtJ_P0055866 Dgkz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055867.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102881752 102928742 - MGP_NODShiLtJ_P0055867 Dgkz protein_coding protein_coding MGP_NODShiLtJ_T0055868.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102881754 102915217 - MGP_NODShiLtJ_P0055868 Dgkz protein_coding protein_coding MGP_NODShiLtJ_T0055869.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102881755 102900468 - MGP_NODShiLtJ_P0055869 Dgkz protein_coding protein_coding MGP_NODShiLtJ_T0055870.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102881755 102917160 - MGP_NODShiLtJ_P0055870 Dgkz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055871.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102882164 102882861 - Dgkz protein_coding retained_intron MGP_NODShiLtJ_T0055872.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102882312 102883510 - Dgkz protein_coding retained_intron MGP_NODShiLtJ_T0055873.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102882370 102884428 - Dgkz protein_coding retained_intron MGP_NODShiLtJ_T0055874.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102882383 102883440 - Dgkz protein_coding retained_intron MGP_NODShiLtJ_T0055875.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102882709 102884529 - Dgkz protein_coding retained_intron MGP_NODShiLtJ_T0055876.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102884835 102886953 - Dgkz protein_coding processed_transcript MGP_NODShiLtJ_T0055877.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102889682 102900352 - MGP_NODShiLtJ_P0055877 Dgkz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055878.1 MGP_NODShiLtJ_G0025984.1 mouse_genomes_project 2 102891036 102895286 - Dgkz protein_coding processed_transcript MGP_NODShiLtJ_T0054649.1 MGP_NODShiLtJ_G0025602.1 mouse_genomes_project 2 67173700 67282726 + MGP_NODShiLtJ_P0054649 Psmd14 protein_coding protein_coding MGP_NODShiLtJ_T0054650.1 MGP_NODShiLtJ_G0025602.1 mouse_genomes_project 2 67173748 67184381 + Psmd14 protein_coding processed_transcript MGP_NODShiLtJ_T0054651.1 MGP_NODShiLtJ_G0025602.1 mouse_genomes_project 2 67173766 67230531 + Psmd14 protein_coding processed_transcript MGP_NODShiLtJ_T0054652.1 MGP_NODShiLtJ_G0025602.1 mouse_genomes_project 2 67173786 67190583 + Psmd14 protein_coding processed_transcript MGP_NODShiLtJ_T0054653.1 MGP_NODShiLtJ_G0025602.1 mouse_genomes_project 2 67173797 67227003 + Psmd14 protein_coding processed_transcript MGP_NODShiLtJ_T0054654.1 MGP_NODShiLtJ_G0025602.1 mouse_genomes_project 2 67232424 67282403 + Psmd14 protein_coding processed_transcript MGP_NODShiLtJ_T0054655.1 MGP_NODShiLtJ_G0025602.1 mouse_genomes_project 2 67244326 67282424 + Psmd14 protein_coding processed_transcript MGP_NODShiLtJ_T0013598.1 MGP_NODShiLtJ_G0011706.1 mouse_genomes_project 2 123551570 123552056 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057559.1 MGP_NODShiLtJ_G0026365.1 mouse_genomes_project 2 149620749 149639216 + MGP_NODShiLtJ_P0057559 Crls1 protein_coding protein_coding MGP_NODShiLtJ_T0057560.1 MGP_NODShiLtJ_G0026365.1 mouse_genomes_project 2 149620761 149641915 + MGP_NODShiLtJ_P0057560 Crls1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057561.1 MGP_NODShiLtJ_G0026365.1 mouse_genomes_project 2 149620890 149641910 + MGP_NODShiLtJ_P0057561 Crls1 protein_coding protein_coding MGP_NODShiLtJ_T0057562.1 MGP_NODShiLtJ_G0026365.1 mouse_genomes_project 2 149621811 149640968 + MGP_NODShiLtJ_P0057562 Crls1 protein_coding protein_coding MGP_NODShiLtJ_T0054121.1 MGP_NODShiLtJ_G0025490.1 mouse_genomes_project 2 35773662 35796653 - MGP_NODShiLtJ_P0054121 Stom protein_coding protein_coding MGP_NODShiLtJ_T0054122.1 MGP_NODShiLtJ_G0025490.1 mouse_genomes_project 2 35775017 35780182 - Stom protein_coding retained_intron MGP_NODShiLtJ_T0057991.1 MGP_NODShiLtJ_G0026483.1 mouse_genomes_project 2 171661366 171667223 - MGP_NODShiLtJ_P0057991 Defb26 protein_coding protein_coding MGP_NODShiLtJ_T0053303.1 MGP_NODShiLtJ_G0025374.1 mouse_genomes_project 2 29013292 29042559 + MGP_NODShiLtJ_P0053303 Ttf1 protein_coding protein_coding MGP_NODShiLtJ_T0053304.1 MGP_NODShiLtJ_G0025374.1 mouse_genomes_project 2 29013296 29042519 + Ttf1 protein_coding retained_intron MGP_NODShiLtJ_T0053305.1 MGP_NODShiLtJ_G0025374.1 mouse_genomes_project 2 29027694 29036517 + Ttf1 protein_coding retained_intron MGP_NODShiLtJ_T0053306.1 MGP_NODShiLtJ_G0025374.1 mouse_genomes_project 2 29038329 29039613 + Ttf1 protein_coding retained_intron MGP_NODShiLtJ_T0098002.1 MGP_NODShiLtJ_G0036414.1 mouse_genomes_project 2 29433317 29433452 + Gm24976 rRNA rRNA MGP_NODShiLtJ_T0007369.1 MGP_NODShiLtJ_G0006035.1 mouse_genomes_project 2 193131432 193132433 - Gm14272 lincRNA lincRNA MGP_NODShiLtJ_T0017782.1 MGP_NODShiLtJ_G0015367.1 mouse_genomes_project 2 202314060 202323505 - Gm14343 processed_transcript processed_transcript MGP_NODShiLtJ_T0058631.1 MGP_NODShiLtJ_G0026618.1 mouse_genomes_project 2 178410593 178425902 + Actr5 protein_coding retained_intron MGP_NODShiLtJ_T0058632.1 MGP_NODShiLtJ_G0026618.1 mouse_genomes_project 2 178410593 178414863 + Actr5 protein_coding retained_intron MGP_NODShiLtJ_T0058633.1 MGP_NODShiLtJ_G0026618.1 mouse_genomes_project 2 178410593 178425902 + MGP_NODShiLtJ_P0058633 Actr5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058634.1 MGP_NODShiLtJ_G0026618.1 mouse_genomes_project 2 178410593 178425915 + MGP_NODShiLtJ_P0058634 Actr5 protein_coding protein_coding MGP_NODShiLtJ_T0058635.1 MGP_NODShiLtJ_G0026618.1 mouse_genomes_project 2 178417334 178423401 + Actr5 protein_coding processed_transcript MGP_NODShiLtJ_T0054196.1 MGP_NODShiLtJ_G0025518.1 mouse_genomes_project 2 37558074 37559028 + MGP_NODShiLtJ_P0054196 Olfr354 protein_coding protein_coding MGP_NODShiLtJ_T0100373.1 MGP_NODShiLtJ_G0038767.1 mouse_genomes_project 2 71592932 71593046 - Gm24138 snoRNA snoRNA MGP_NODShiLtJ_T0003840.1 MGP_NODShiLtJ_G0003430.1 mouse_genomes_project 2 4155776 4158405 + Gm13389 antisense antisense MGP_NODShiLtJ_T0055090.1 MGP_NODShiLtJ_G0025688.1 mouse_genomes_project 2 81996490 82032835 + MGP_NODShiLtJ_P0055090 Hoxd3 protein_coding protein_coding MGP_NODShiLtJ_T0055095.1 MGP_NODShiLtJ_G0025688.1 mouse_genomes_project 2 82017522 82028778 + MGP_NODShiLtJ_P0055095 Hoxd3 protein_coding protein_coding MGP_NODShiLtJ_T0055096.1 MGP_NODShiLtJ_G0025688.1 mouse_genomes_project 2 82021117 82032479 + MGP_NODShiLtJ_P0055096 Hoxd3 protein_coding protein_coding MGP_NODShiLtJ_T0055097.1 MGP_NODShiLtJ_G0025688.1 mouse_genomes_project 2 82024220 82032464 + MGP_NODShiLtJ_P0055097 Hoxd3 protein_coding protein_coding MGP_NODShiLtJ_T0055098.1 MGP_NODShiLtJ_G0025688.1 mouse_genomes_project 2 82030237 82031160 + MGP_NODShiLtJ_P0055098 Hoxd3 protein_coding protein_coding MGP_NODShiLtJ_T0055099.1 MGP_NODShiLtJ_G0025688.1 mouse_genomes_project 2 82030285 82033006 + Hoxd3 protein_coding retained_intron MGP_NODShiLtJ_T0007134.1 MGP_NODShiLtJ_G0005842.1 mouse_genomes_project 2 48322331 48324137 + 1700019E08Rik lincRNA lincRNA MGP_NODShiLtJ_T0007135.1 MGP_NODShiLtJ_G0005842.1 mouse_genomes_project 2 48322526 48323756 + 1700019E08Rik lincRNA lincRNA MGP_NODShiLtJ_T0013672.1 MGP_NODShiLtJ_G0011780.1 mouse_genomes_project 2 161325385 161326005 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058852.1 MGP_NODShiLtJ_G0026678.1 mouse_genomes_project 2 184904728 184909968 - MGP_NODShiLtJ_P0058852 Eppin protein_coding protein_coding MGP_NODShiLtJ_T0056310.1 MGP_NODShiLtJ_G0026069.1 mouse_genomes_project 2 124821027 124884635 + MGP_NODShiLtJ_P0056310 Slc5a12 protein_coding protein_coding MGP_NODShiLtJ_T0056311.1 MGP_NODShiLtJ_G0026069.1 mouse_genomes_project 2 124821036 124884645 + MGP_NODShiLtJ_P0056311 Slc5a12 protein_coding protein_coding MGP_NODShiLtJ_T0056312.1 MGP_NODShiLtJ_G0026069.1 mouse_genomes_project 2 124821148 124853628 + Slc5a12 protein_coding retained_intron MGP_NODShiLtJ_T0056313.1 MGP_NODShiLtJ_G0026069.1 mouse_genomes_project 2 124821453 124829927 + Slc5a12 protein_coding processed_transcript MGP_NODShiLtJ_T0056314.1 MGP_NODShiLtJ_G0026069.1 mouse_genomes_project 2 124829861 124883450 + Slc5a12 protein_coding processed_transcript MGP_NODShiLtJ_T0100405.1 MGP_NODShiLtJ_G0038799.1 mouse_genomes_project 2 166734679 166734992 + Gm24221 snoRNA snoRNA MGP_NODShiLtJ_T0013344.1 MGP_NODShiLtJ_G0011452.1 mouse_genomes_project 2 22450348 22452001 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057028.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141298433 141302810 - Myef2 protein_coding processed_transcript MGP_NODShiLtJ_T0057029.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141300077 141338996 - MGP_NODShiLtJ_P0057029 Myef2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057030.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141300377 141339027 - MGP_NODShiLtJ_P0057030 Myef2 protein_coding protein_coding MGP_NODShiLtJ_T0057031.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141301550 141339024 - MGP_NODShiLtJ_P0057031 Myef2 protein_coding protein_coding MGP_NODShiLtJ_T0057032.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141301551 141339061 - MGP_NODShiLtJ_P0057032 Myef2 protein_coding protein_coding MGP_NODShiLtJ_T0057033.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141301551 141339062 - MGP_NODShiLtJ_P0057033 Myef2 protein_coding protein_coding MGP_NODShiLtJ_T0057034.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141302632 141332274 - MGP_NODShiLtJ_P0057034 Myef2 protein_coding protein_coding MGP_NODShiLtJ_T0057035.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141309853 141338815 - MGP_NODShiLtJ_P0057035 Myef2 protein_coding protein_coding MGP_NODShiLtJ_T0057036.1 MGP_NODShiLtJ_G0026241.1 mouse_genomes_project 2 141313775 141338976 - Myef2 protein_coding retained_intron MGP_NODShiLtJ_T0057080.1 MGP_NODShiLtJ_G0026255.1 mouse_genomes_project 2 142432914 142446864 + MGP_NODShiLtJ_P0057080 Dtwd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056578.1 MGP_NODShiLtJ_G0026158.1 mouse_genomes_project 2 134898281 134901431 + MGP_NODShiLtJ_P0056578 Chac1 protein_coding protein_coding MGP_NODShiLtJ_T0059201.1 MGP_NODShiLtJ_G0026752.1 mouse_genomes_project 2 191350179 191433837 - MGP_NODShiLtJ_P0059201 Bcas1 protein_coding protein_coding MGP_NODShiLtJ_T0059202.1 MGP_NODShiLtJ_G0026752.1 mouse_genomes_project 2 191352424 191440985 - MGP_NODShiLtJ_P0059202 Bcas1 protein_coding protein_coding MGP_NODShiLtJ_T0059203.1 MGP_NODShiLtJ_G0026752.1 mouse_genomes_project 2 191352577 191440985 - MGP_NODShiLtJ_P0059203 Bcas1 protein_coding protein_coding MGP_NODShiLtJ_T0059204.1 MGP_NODShiLtJ_G0026752.1 mouse_genomes_project 2 191353364 191355174 - Bcas1 protein_coding processed_transcript MGP_NODShiLtJ_T0059205.1 MGP_NODShiLtJ_G0026752.1 mouse_genomes_project 2 191353378 191362548 - Bcas1 protein_coding processed_transcript MGP_NODShiLtJ_T0059206.1 MGP_NODShiLtJ_G0026752.1 mouse_genomes_project 2 191353522 191355229 - Bcas1 protein_coding processed_transcript MGP_NODShiLtJ_T0059207.1 MGP_NODShiLtJ_G0026752.1 mouse_genomes_project 2 191397156 191398189 - Bcas1 protein_coding processed_transcript MGP_NODShiLtJ_T0059208.1 MGP_NODShiLtJ_G0026752.1 mouse_genomes_project 2 191409866 191440985 - Bcas1 protein_coding processed_transcript MGP_NODShiLtJ_T0010277.1 MGP_NODShiLtJ_G0008410.1 mouse_genomes_project 2 21823233 21823328 + Gm23636 miRNA miRNA MGP_NODShiLtJ_T0055543.1 MGP_NODShiLtJ_G0025868.1 mouse_genomes_project 2 98070318 98071284 + MGP_NODShiLtJ_P0055543 Olfr1161 protein_coding protein_coding MGP_NODShiLtJ_T0011380.1 MGP_NODShiLtJ_G0009513.1 mouse_genomes_project 2 23216707 23216882 + Gm26323 misc_RNA misc_RNA MGP_NODShiLtJ_T0058261.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175090419 175122813 - MGP_NODShiLtJ_P0058261 Gss protein_coding protein_coding MGP_NODShiLtJ_T0058262.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175090427 175122717 - MGP_NODShiLtJ_P0058262 Gss protein_coding protein_coding MGP_NODShiLtJ_T0058263.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175090727 175102052 - MGP_NODShiLtJ_P0058263 Gss protein_coding protein_coding MGP_NODShiLtJ_T0058264.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175091449 175103437 - Gss protein_coding retained_intron MGP_NODShiLtJ_T0058267.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175102012 175111738 - MGP_NODShiLtJ_P0058267 Gss protein_coding protein_coding MGP_NODShiLtJ_T0058268.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175105842 175122730 - Gss protein_coding processed_transcript MGP_NODShiLtJ_T0058269.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175106578 175116657 - Gss protein_coding retained_intron MGP_NODShiLtJ_T0058270.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175106649 175122570 - MGP_NODShiLtJ_P0058270 Gss protein_coding protein_coding MGP_NODShiLtJ_T0058271.1 MGP_NODShiLtJ_G0026557.1 mouse_genomes_project 2 175107361 175111730 - Gss protein_coding processed_transcript MGP_NODShiLtJ_T0007108.1 MGP_NODShiLtJ_G0005823.1 mouse_genomes_project 2 27938491 27970723 + F730016J06Rik lincRNA lincRNA MGP_NODShiLtJ_T0007109.1 MGP_NODShiLtJ_G0005823.1 mouse_genomes_project 2 27938497 27956891 + F730016J06Rik lincRNA lincRNA MGP_NODShiLtJ_T0007110.1 MGP_NODShiLtJ_G0005823.1 mouse_genomes_project 2 27961243 27968195 + F730016J06Rik lincRNA lincRNA MGP_NODShiLtJ_T0056180.1 MGP_NODShiLtJ_G0026040.1 mouse_genomes_project 2 117688965 117760680 - MGP_NODShiLtJ_P0056180 Hipk3 protein_coding protein_coding MGP_NODShiLtJ_T0056181.1 MGP_NODShiLtJ_G0026040.1 mouse_genomes_project 2 117692267 117759924 - MGP_NODShiLtJ_P0056181 Hipk3 protein_coding protein_coding MGP_NODShiLtJ_T0056182.1 MGP_NODShiLtJ_G0026040.1 mouse_genomes_project 2 117692341 117760188 - MGP_NODShiLtJ_P0056182 Hipk3 protein_coding protein_coding MGP_NODShiLtJ_T0056183.1 MGP_NODShiLtJ_G0026040.1 mouse_genomes_project 2 117696162 117702305 - Hipk3 protein_coding processed_transcript MGP_NODShiLtJ_T0013583.1 MGP_NODShiLtJ_G0011691.1 mouse_genomes_project 2 117825936 117828379 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053242.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28402222 28437832 + MGP_NODShiLtJ_P0053242 Ralgds protein_coding protein_coding MGP_NODShiLtJ_T0053243.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28402423 28447945 + MGP_NODShiLtJ_P0053243 Ralgds protein_coding protein_coding MGP_NODShiLtJ_T0053244.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28428128 28447930 + MGP_NODShiLtJ_P0053244 Ralgds protein_coding protein_coding MGP_NODShiLtJ_T0053245.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28428315 28447500 + MGP_NODShiLtJ_P0053245 Ralgds protein_coding protein_coding MGP_NODShiLtJ_T0053246.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28428322 28447934 + Ralgds protein_coding retained_intron MGP_NODShiLtJ_T0053247.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28435607 28437784 + Ralgds protein_coding retained_intron MGP_NODShiLtJ_T0053248.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28437214 28439940 + MGP_NODShiLtJ_P0053248 Ralgds protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053249.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28440156 28442084 + Ralgds protein_coding retained_intron MGP_NODShiLtJ_T0053250.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28442413 28443840 + Ralgds protein_coding retained_intron MGP_NODShiLtJ_T0053251.1 MGP_NODShiLtJ_G0025363.1 mouse_genomes_project 2 28443921 28447189 + MGP_NODShiLtJ_P0053251 Ralgds protein_coding protein_coding MGP_NODShiLtJ_T0059386.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201676346 201683556 + MGP_NODShiLtJ_P0059386 Adrm1 protein_coding protein_coding MGP_NODShiLtJ_T0059387.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201676456 201677300 + Adrm1 protein_coding retained_intron MGP_NODShiLtJ_T0059388.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201676467 201683554 + Adrm1 protein_coding retained_intron MGP_NODShiLtJ_T0059389.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201676467 201678142 + Adrm1 protein_coding retained_intron MGP_NODShiLtJ_T0059390.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201676475 201683405 + Adrm1 protein_coding retained_intron MGP_NODShiLtJ_T0059391.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201676520 201683556 + Adrm1 protein_coding processed_transcript MGP_NODShiLtJ_T0059392.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201677014 201683554 + Adrm1 protein_coding retained_intron MGP_NODShiLtJ_T0059393.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201677827 201683557 + MGP_NODShiLtJ_P0059393 Adrm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059394.1 MGP_NODShiLtJ_G0026804.1 mouse_genomes_project 2 201681486 201683552 + Adrm1 protein_coding retained_intron MGP_NODShiLtJ_T0017612.1 MGP_NODShiLtJ_G0015278.1 mouse_genomes_project 2 29741275 29743607 - processed_transcript processed_transcript MGP_NODShiLtJ_T0057732.1 MGP_NODShiLtJ_G0026406.1 mouse_genomes_project 2 162889552 162905553 + MGP_NODShiLtJ_P0057732 Sec23b protein_coding protein_coding MGP_NODShiLtJ_T0057733.1 MGP_NODShiLtJ_G0026406.1 mouse_genomes_project 2 162889579 162930477 + MGP_NODShiLtJ_P0057733 Sec23b protein_coding protein_coding MGP_NODShiLtJ_T0057734.1 MGP_NODShiLtJ_G0026406.1 mouse_genomes_project 2 162889604 162892625 + MGP_NODShiLtJ_P0057734 Sec23b protein_coding protein_coding MGP_NODShiLtJ_T0057735.1 MGP_NODShiLtJ_G0026406.1 mouse_genomes_project 2 162889635 162892734 + Sec23b protein_coding processed_transcript MGP_NODShiLtJ_T0057736.1 MGP_NODShiLtJ_G0026406.1 mouse_genomes_project 2 162889642 162904336 + MGP_NODShiLtJ_P0057736 Sec23b protein_coding protein_coding MGP_NODShiLtJ_T0057737.1 MGP_NODShiLtJ_G0026406.1 mouse_genomes_project 2 162889657 162902178 + MGP_NODShiLtJ_P0057737 Sec23b protein_coding protein_coding MGP_NODShiLtJ_T0057738.1 MGP_NODShiLtJ_G0026406.1 mouse_genomes_project 2 162902424 162930477 + Sec23b protein_coding processed_transcript MGP_NODShiLtJ_T0057739.1 MGP_NODShiLtJ_G0026406.1 mouse_genomes_project 2 162914789 162919677 + Sec23b protein_coding processed_transcript MGP_NODShiLtJ_T0100378.1 MGP_NODShiLtJ_G0038772.1 mouse_genomes_project 2 94310748 94310892 + Gm23716 snoRNA snoRNA MGP_NODShiLtJ_T0053678.1 MGP_NODShiLtJ_G0025425.1 mouse_genomes_project 2 31798306 31814033 + MGP_NODShiLtJ_P0053678 Prdm12 protein_coding protein_coding MGP_NODShiLtJ_T0007332.1 MGP_NODShiLtJ_G0006005.1 mouse_genomes_project 2 186714491 186715561 - Gm11466 lincRNA lincRNA MGP_NODShiLtJ_T0003915.1 MGP_NODShiLtJ_G0003489.1 mouse_genomes_project 2 46413757 46420756 - Arhgap15os antisense antisense MGP_NODShiLtJ_T0013696.1 MGP_NODShiLtJ_G0011804.1 mouse_genomes_project 2 169325629 169326028 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013568.1 MGP_NODShiLtJ_G0011676.1 mouse_genomes_project 2 113384198 113384985 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054457.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56019043 56229119 - MGP_NODShiLtJ_P0054457 Neb protein_coding protein_coding MGP_NODShiLtJ_T0054458.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56019058 56224642 - MGP_NODShiLtJ_P0054458 Neb protein_coding protein_coding MGP_NODShiLtJ_T0054459.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56019058 56110481 - MGP_NODShiLtJ_P0054459 Neb protein_coding protein_coding MGP_NODShiLtJ_T0054460.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56019512 56041489 - Neb protein_coding processed_transcript MGP_NODShiLtJ_T0054461.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56019653 56223989 - MGP_NODShiLtJ_P0054461 Neb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054462.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56019656 56062062 - MGP_NODShiLtJ_P0054462 Neb protein_coding protein_coding MGP_NODShiLtJ_T0054463.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56039914 56047964 - Neb protein_coding processed_transcript MGP_NODShiLtJ_T0054464.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56059224 56061641 - Neb protein_coding processed_transcript MGP_NODShiLtJ_T0054465.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56063493 56079215 - MGP_NODShiLtJ_P0054465 Neb protein_coding protein_coding MGP_NODShiLtJ_T0054466.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56108526 56146590 - MGP_NODShiLtJ_P0054466 Neb protein_coding protein_coding MGP_NODShiLtJ_T0054467.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56209153 56225270 - Neb protein_coding processed_transcript MGP_NODShiLtJ_T0054468.1 MGP_NODShiLtJ_G0025569.1 mouse_genomes_project 2 56218341 56229119 - Neb protein_coding processed_transcript MGP_NODShiLtJ_T0013447.1 MGP_NODShiLtJ_G0011555.1 mouse_genomes_project 2 65418111 65419106 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057818.1 MGP_NODShiLtJ_G0026426.1 mouse_genomes_project 2 167296943 167300351 + MGP_NODShiLtJ_P0057818 Nxt1 protein_coding protein_coding MGP_NODShiLtJ_T0057819.1 MGP_NODShiLtJ_G0026426.1 mouse_genomes_project 2 167296968 167300351 + MGP_NODShiLtJ_P0057819 Nxt1 protein_coding protein_coding MGP_NODShiLtJ_T0054955.1 MGP_NODShiLtJ_G0025660.1 mouse_genomes_project 2 78422436 78510120 + MGP_NODShiLtJ_P0054955 Metap1d protein_coding protein_coding MGP_NODShiLtJ_T0054956.1 MGP_NODShiLtJ_G0025660.1 mouse_genomes_project 2 78422493 78500842 + Metap1d protein_coding processed_transcript MGP_NODShiLtJ_T0054957.1 MGP_NODShiLtJ_G0025660.1 mouse_genomes_project 2 78422511 78510123 + Metap1d protein_coding processed_transcript MGP_NODShiLtJ_T0054958.1 MGP_NODShiLtJ_G0025660.1 mouse_genomes_project 2 78422523 78509715 + Metap1d protein_coding processed_transcript MGP_NODShiLtJ_T0054959.1 MGP_NODShiLtJ_G0025660.1 mouse_genomes_project 2 78495133 78502033 + Metap1d protein_coding processed_transcript MGP_NODShiLtJ_T0054960.1 MGP_NODShiLtJ_G0025660.1 mouse_genomes_project 2 78500298 78501168 + Metap1d protein_coding processed_transcript MGP_NODShiLtJ_T0053877.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32953098 32968139 - MGP_NODShiLtJ_P0053877 Fpgs protein_coding protein_coding MGP_NODShiLtJ_T0053878.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32953099 32968089 - Fpgs protein_coding retained_intron MGP_NODShiLtJ_T0053879.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32953306 32956446 - Fpgs protein_coding retained_intron MGP_NODShiLtJ_T0053880.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32953791 32955494 - Fpgs protein_coding processed_transcript MGP_NODShiLtJ_T0053881.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32956991 32957992 - Fpgs protein_coding retained_intron MGP_NODShiLtJ_T0053882.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32957338 32979101 - MGP_NODShiLtJ_P0053882 Fpgs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053883.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32957503 32958327 - Fpgs protein_coding retained_intron MGP_NODShiLtJ_T0053884.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32957905 32979109 - MGP_NODShiLtJ_P0053884 Fpgs protein_coding protein_coding MGP_NODShiLtJ_T0053885.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32966404 32967198 - Fpgs protein_coding retained_intron MGP_NODShiLtJ_T0053886.1 MGP_NODShiLtJ_G0025455.1 mouse_genomes_project 2 32966666 32978995 - MGP_NODShiLtJ_P0053886 Fpgs protein_coding protein_coding MGP_NODShiLtJ_T0100354.1 MGP_NODShiLtJ_G0038748.1 mouse_genomes_project 2 32450715 32450800 + Gm25632 snoRNA snoRNA MGP_NODShiLtJ_T0057146.1 MGP_NODShiLtJ_G0026268.1 mouse_genomes_project 2 143577171 143601576 - MGP_NODShiLtJ_P0057146 1810024B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0057147.1 MGP_NODShiLtJ_G0026268.1 mouse_genomes_project 2 143595936 143601550 - 1810024B03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0010247.1 MGP_NODShiLtJ_G0008380.1 mouse_genomes_project 2 8351533 8351614 + miRNA miRNA MGP_NODShiLtJ_T0057195.1 MGP_NODShiLtJ_G0026281.1 mouse_genomes_project 2 143994289 144016059 + MGP_NODShiLtJ_P0057195 Mrps5 protein_coding protein_coding MGP_NODShiLtJ_T0057196.1 MGP_NODShiLtJ_G0026281.1 mouse_genomes_project 2 143994486 144013752 + Mrps5 protein_coding retained_intron MGP_NODShiLtJ_T0057197.1 MGP_NODShiLtJ_G0026281.1 mouse_genomes_project 2 143994486 144003125 + Mrps5 protein_coding retained_intron MGP_NODShiLtJ_T0057198.1 MGP_NODShiLtJ_G0026281.1 mouse_genomes_project 2 143997508 144002763 + MGP_NODShiLtJ_P0057198 Mrps5 protein_coding protein_coding MGP_NODShiLtJ_T0057199.1 MGP_NODShiLtJ_G0026281.1 mouse_genomes_project 2 144002740 144005444 + Mrps5 protein_coding retained_intron MGP_NODShiLtJ_T0057200.1 MGP_NODShiLtJ_G0026281.1 mouse_genomes_project 2 144006893 144013085 + Mrps5 protein_coding retained_intron MGP_NODShiLtJ_T0057201.1 MGP_NODShiLtJ_G0026281.1 mouse_genomes_project 2 144007100 144008313 + Mrps5 protein_coding retained_intron MGP_NODShiLtJ_T0007138.1 MGP_NODShiLtJ_G0005845.1 mouse_genomes_project 2 49251189 49279512 - Gm13470 lincRNA lincRNA MGP_NODShiLtJ_T0007163.1 MGP_NODShiLtJ_G0005868.1 mouse_genomes_project 2 78760475 78769545 + Gm13647 lincRNA lincRNA MGP_NODShiLtJ_T0013324.1 MGP_NODShiLtJ_G0011432.1 mouse_genomes_project 2 16712592 16712857 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007372.1 MGP_NODShiLtJ_G0006038.1 mouse_genomes_project 2 194681273 194682428 + Gm14642 lincRNA lincRNA MGP_NODShiLtJ_T0055647.1 MGP_NODShiLtJ_G0025954.1 mouse_genomes_project 2 101488085 101548439 + MGP_NODShiLtJ_P0055647 Nup160 protein_coding protein_coding MGP_NODShiLtJ_T0055648.1 MGP_NODShiLtJ_G0025954.1 mouse_genomes_project 2 101496015 101503881 + Nup160 protein_coding processed_transcript MGP_NODShiLtJ_T0055649.1 MGP_NODShiLtJ_G0025954.1 mouse_genomes_project 2 101500468 101505601 + Nup160 protein_coding processed_transcript MGP_NODShiLtJ_T0055650.1 MGP_NODShiLtJ_G0025954.1 mouse_genomes_project 2 101501457 101513604 + Nup160 protein_coding processed_transcript MGP_NODShiLtJ_T0055651.1 MGP_NODShiLtJ_G0025954.1 mouse_genomes_project 2 101510876 101513206 + Nup160 protein_coding processed_transcript MGP_NODShiLtJ_T0055652.1 MGP_NODShiLtJ_G0025954.1 mouse_genomes_project 2 101528406 101528759 + Nup160 protein_coding processed_transcript MGP_NODShiLtJ_T0055653.1 MGP_NODShiLtJ_G0025954.1 mouse_genomes_project 2 101543775 101546836 + Nup160 protein_coding processed_transcript MGP_NODShiLtJ_T0013451.1 MGP_NODShiLtJ_G0011559.1 mouse_genomes_project 2 66607651 66607942 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101446.1 MGP_NODShiLtJ_G0026839.1 mouse_genomes_project 2 202971300 202974629 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101447.1 MGP_NODShiLtJ_G0026839.1 mouse_genomes_project 2 202971461 202974242 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0013719.1 MGP_NODShiLtJ_G0011827.1 mouse_genomes_project 2 176221120 176221760 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056027.1 MGP_NODShiLtJ_G0026010.1 mouse_genomes_project 2 105566233 105595009 - MGP_NODShiLtJ_P0056027 Api5 protein_coding protein_coding MGP_NODShiLtJ_T0056028.1 MGP_NODShiLtJ_G0026010.1 mouse_genomes_project 2 105573383 105594985 - Api5 protein_coding processed_transcript MGP_NODShiLtJ_T0056029.1 MGP_NODShiLtJ_G0026010.1 mouse_genomes_project 2 105577459 105595153 - Api5 protein_coding retained_intron MGP_NODShiLtJ_T0056030.1 MGP_NODShiLtJ_G0026010.1 mouse_genomes_project 2 105582192 105589003 - Api5 protein_coding processed_transcript MGP_NODShiLtJ_T0055505.1 MGP_NODShiLtJ_G0025840.1 mouse_genomes_project 2 97303282 97306622 - MGP_NODShiLtJ_P0055505 Pramel7 protein_coding protein_coding MGP_NODShiLtJ_T0055506.1 MGP_NODShiLtJ_G0025840.1 mouse_genomes_project 2 97305087 97311941 - Pramel7 protein_coding processed_transcript MGP_NODShiLtJ_T0055507.1 MGP_NODShiLtJ_G0025840.1 mouse_genomes_project 2 97305181 97312942 - Pramel7 protein_coding processed_transcript MGP_NODShiLtJ_T0055508.1 MGP_NODShiLtJ_G0025840.1 mouse_genomes_project 2 97305323 97311950 - Pramel7 protein_coding processed_transcript MGP_NODShiLtJ_T0013515.1 MGP_NODShiLtJ_G0011623.1 mouse_genomes_project 2 92020304 92021006 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007366.1 MGP_NODShiLtJ_G0006033.1 mouse_genomes_project 2 192289854 192292302 + Gm14640 lincRNA lincRNA MGP_NODShiLtJ_T0007267.1 MGP_NODShiLtJ_G0005951.1 mouse_genomes_project 2 145705609 145722237 + A730036I17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007268.1 MGP_NODShiLtJ_G0005951.1 mouse_genomes_project 2 145705668 145719902 + A730036I17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007269.1 MGP_NODShiLtJ_G0005951.1 mouse_genomes_project 2 145714671 145718619 + A730036I17Rik lincRNA lincRNA MGP_NODShiLtJ_T0056184.1 MGP_NODShiLtJ_G0026041.1 mouse_genomes_project 2 117863514 117943728 + MGP_NODShiLtJ_P0056184 Cstf3 protein_coding protein_coding MGP_NODShiLtJ_T0056185.1 MGP_NODShiLtJ_G0026041.1 mouse_genomes_project 2 117863523 117886471 + Cstf3 protein_coding retained_intron MGP_NODShiLtJ_T0056186.1 MGP_NODShiLtJ_G0026041.1 mouse_genomes_project 2 117863606 117884503 + Cstf3 protein_coding retained_intron MGP_NODShiLtJ_T0056187.1 MGP_NODShiLtJ_G0026041.1 mouse_genomes_project 2 117900410 117939088 + MGP_NODShiLtJ_P0056187 Cstf3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056188.1 MGP_NODShiLtJ_G0026041.1 mouse_genomes_project 2 117933807 117941737 + Cstf3 protein_coding processed_transcript MGP_NODShiLtJ_T0056190.1 MGP_NODShiLtJ_G0026041.1 mouse_genomes_project 2 117941434 117942478 + Cstf3 protein_coding processed_transcript MGP_NODShiLtJ_T0056191.1 MGP_NODShiLtJ_G0026041.1 mouse_genomes_project 2 117941964 117943038 + Cstf3 protein_coding processed_transcript MGP_NODShiLtJ_T0059221.1 MGP_NODShiLtJ_G0026759.1 mouse_genomes_project 2 193521103 193532493 + MGP_NODShiLtJ_P0059221 Fam210b protein_coding protein_coding MGP_NODShiLtJ_T0013429.1 MGP_NODShiLtJ_G0011537.1 mouse_genomes_project 2 59714412 59715438 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056794.1 MGP_NODShiLtJ_G0026194.1 mouse_genomes_project 2 136720827 136740346 - MGP_NODShiLtJ_P0056794 Epb42 protein_coding protein_coding MGP_NODShiLtJ_T0056795.1 MGP_NODShiLtJ_G0026194.1 mouse_genomes_project 2 136721155 136730527 - Epb42 protein_coding processed_transcript MGP_NODShiLtJ_T0056796.1 MGP_NODShiLtJ_G0026194.1 mouse_genomes_project 2 136721155 136725741 - Epb42 protein_coding processed_transcript MGP_NODShiLtJ_T0056797.1 MGP_NODShiLtJ_G0026194.1 mouse_genomes_project 2 136722340 136724951 - Epb42 protein_coding retained_intron MGP_NODShiLtJ_T0056798.1 MGP_NODShiLtJ_G0026194.1 mouse_genomes_project 2 136726583 136740109 - MGP_NODShiLtJ_P0056798 Epb42 protein_coding protein_coding MGP_NODShiLtJ_T0056799.1 MGP_NODShiLtJ_G0026194.1 mouse_genomes_project 2 136730973 136739955 - Epb42 protein_coding processed_transcript MGP_NODShiLtJ_T0056800.1 MGP_NODShiLtJ_G0026194.1 mouse_genomes_project 2 136736676 136740019 - Epb42 protein_coding processed_transcript MGP_NODShiLtJ_T0017682.1 MGP_NODShiLtJ_G0015321.1 mouse_genomes_project 2 124081603 124092546 - Platr8 processed_transcript processed_transcript MGP_NODShiLtJ_T0100394.1 MGP_NODShiLtJ_G0038788.1 mouse_genomes_project 2 145234917 145235041 + Gm23172 snoRNA snoRNA MGP_NODShiLtJ_T0058015.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 171965188 172018246 - MGP_NODShiLtJ_P0058015 Bcl2l1 protein_coding protein_coding MGP_NODShiLtJ_T0058016.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 171965193 172017184 - MGP_NODShiLtJ_P0058016 Bcl2l1 protein_coding protein_coding MGP_NODShiLtJ_T0058017.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 171965930 172015041 - Bcl2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0058018.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 172014632 172017159 - MGP_NODShiLtJ_P0058018 Bcl2l1 protein_coding protein_coding MGP_NODShiLtJ_T0058019.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 172014867 172016816 - MGP_NODShiLtJ_P0058019 Bcl2l1 protein_coding protein_coding MGP_NODShiLtJ_T0058020.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 172015932 172017630 - MGP_NODShiLtJ_P0058020 Bcl2l1 protein_coding protein_coding MGP_NODShiLtJ_T0058021.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 172016034 172017170 - MGP_NODShiLtJ_P0058021 Bcl2l1 protein_coding protein_coding MGP_NODShiLtJ_T0058022.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 172016206 172017136 - MGP_NODShiLtJ_P0058022 Bcl2l1 protein_coding protein_coding MGP_NODShiLtJ_T0058023.1 MGP_NODShiLtJ_G0026497.1 mouse_genomes_project 2 172016262 172018228 - MGP_NODShiLtJ_P0058023 Bcl2l1 protein_coding protein_coding MGP_NODShiLtJ_T0003853.1 MGP_NODShiLtJ_G0003441.1 mouse_genomes_project 2 18353303 18358392 - Ptf1aos antisense antisense MGP_NODShiLtJ_T0013609.1 MGP_NODShiLtJ_G0011717.1 mouse_genomes_project 2 126643213 126652025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053477.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307085 30324830 + MGP_NODShiLtJ_P0053477 Phyhd1 protein_coding protein_coding MGP_NODShiLtJ_T0053478.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307411 30324831 + MGP_NODShiLtJ_P0053478 Phyhd1 protein_coding protein_coding MGP_NODShiLtJ_T0053479.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307603 30324830 + MGP_NODShiLtJ_P0053479 Phyhd1 protein_coding protein_coding MGP_NODShiLtJ_T0053480.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307617 30323748 + MGP_NODShiLtJ_P0053480 Phyhd1 protein_coding protein_coding MGP_NODShiLtJ_T0053481.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307701 30322927 + MGP_NODShiLtJ_P0053481 Phyhd1 protein_coding protein_coding MGP_NODShiLtJ_T0053482.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307731 30324819 + MGP_NODShiLtJ_P0053482 Phyhd1 protein_coding protein_coding MGP_NODShiLtJ_T0053483.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307733 30322208 + Phyhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0053484.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307738 30323796 + MGP_NODShiLtJ_P0053484 Phyhd1 protein_coding protein_coding MGP_NODShiLtJ_T0053485.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307745 30324780 + MGP_NODShiLtJ_P0053485 Phyhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053486.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30307745 30324780 + MGP_NODShiLtJ_P0053486 Phyhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053487.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30319684 30324822 + MGP_NODShiLtJ_P0053487 Phyhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053488.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30322312 30324536 + Phyhd1 protein_coding retained_intron MGP_NODShiLtJ_T0053489.1 MGP_NODShiLtJ_G0025399.1 mouse_genomes_project 2 30322359 30323192 + Phyhd1 protein_coding retained_intron MGP_NODShiLtJ_T0058565.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269745 177273105 + MGP_NODShiLtJ_P0058565 Nnat protein_coding protein_coding MGP_NODShiLtJ_T0058566.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269774 177272839 + MGP_NODShiLtJ_P0058566 Nnat protein_coding protein_coding MGP_NODShiLtJ_T0058567.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269777 177273123 + MGP_NODShiLtJ_P0058567 Nnat protein_coding protein_coding MGP_NODShiLtJ_T0058568.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269783 177273105 + MGP_NODShiLtJ_P0058568 Nnat protein_coding protein_coding MGP_NODShiLtJ_T0058569.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269788 177272593 + MGP_NODShiLtJ_P0058569 Nnat protein_coding protein_coding MGP_NODShiLtJ_T0058570.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269790 177271927 + MGP_NODShiLtJ_P0058570 Nnat protein_coding protein_coding MGP_NODShiLtJ_T0058571.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269791 177272383 + MGP_NODShiLtJ_P0058571 Nnat protein_coding protein_coding MGP_NODShiLtJ_T0058572.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269797 177272381 + MGP_NODShiLtJ_P0058572 Nnat protein_coding protein_coding MGP_NODShiLtJ_T0058573.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177269807 177273118 + Nnat protein_coding retained_intron MGP_NODShiLtJ_T0058574.1 MGP_NODShiLtJ_G0026604.1 mouse_genomes_project 2 177271563 177272456 + Nnat protein_coding retained_intron MGP_NODShiLtJ_T0056307.1 MGP_NODShiLtJ_G0026067.1 mouse_genomes_project 2 124430377 124482902 - MGP_NODShiLtJ_P0056307 Bbox1 protein_coding protein_coding MGP_NODShiLtJ_T0056308.1 MGP_NODShiLtJ_G0026067.1 mouse_genomes_project 2 124466893 124491362 - MGP_NODShiLtJ_P0056308 Bbox1 protein_coding protein_coding MGP_NODShiLtJ_T0013418.1 MGP_NODShiLtJ_G0011526.1 mouse_genomes_project 2 55439706 55439941 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099139.1 MGP_NODShiLtJ_G0037533.1 mouse_genomes_project 2 166449441 166449548 - Gm25516 snRNA snRNA MGP_NODShiLtJ_T0013759.1 MGP_NODShiLtJ_G0011867.1 mouse_genomes_project 2 195983900 195984473 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013349.1 MGP_NODShiLtJ_G0011457.1 mouse_genomes_project 2 24171063 24172675 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001027.1 MGP_NODShiLtJ_G0000953.1 mouse_genomes_project 2 12974845 12978638 - TEC TEC MGP_NODShiLtJ_T0055502.1 MGP_NODShiLtJ_G0025837.1 mouse_genomes_project 2 97200134 97201106 + MGP_NODShiLtJ_P0055502 Olfr1123 protein_coding protein_coding MGP_NODShiLtJ_T0053628.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31134796 31262670 - MGP_NODShiLtJ_P0053628 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053629.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31134797 31210570 - MGP_NODShiLtJ_P0053629 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053630.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31134797 31262876 - MGP_NODShiLtJ_P0053630 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053631.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31134798 31262864 - MGP_NODShiLtJ_P0053631 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053632.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31135385 31262825 - MGP_NODShiLtJ_P0053632 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053633.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31136785 31210570 - Fnbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0053634.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31141597 31220373 - MGP_NODShiLtJ_P0053634 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053635.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31141902 31262670 - MGP_NODShiLtJ_P0053635 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053636.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31141913 31262670 - MGP_NODShiLtJ_P0053636 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053637.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31141913 31262670 - MGP_NODShiLtJ_P0053637 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053638.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31141913 31262670 - MGP_NODShiLtJ_P0053638 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053639.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31141994 31164281 - MGP_NODShiLtJ_P0053639 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053640.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31162102 31262807 - MGP_NODShiLtJ_P0053640 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053641.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31164403 31262823 - MGP_NODShiLtJ_P0053641 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053642.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31167758 31231590 - MGP_NODShiLtJ_P0053642 Fnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053643.1 MGP_NODShiLtJ_G0025419.1 mouse_genomes_project 2 31210160 31220471 - Fnbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056166.1 MGP_NODShiLtJ_G0026035.1 mouse_genomes_project 2 117263493 117264792 + MGP_NODShiLtJ_P0056166 Gm10912 protein_coding protein_coding MGP_NODShiLtJ_T0004074.1 MGP_NODShiLtJ_G0003598.1 mouse_genomes_project 2 171717167 171722369 - Gm14161 antisense antisense MGP_NODShiLtJ_T0010234.1 MGP_NODShiLtJ_G0008367.1 mouse_genomes_project 2 8304548 8304669 + Gm22072 miRNA miRNA MGP_NODShiLtJ_T0058832.1 MGP_NODShiLtJ_G0026673.1 mouse_genomes_project 2 184787878 184792540 + MGP_NODShiLtJ_P0058832 Dbndd2 protein_coding protein_coding MGP_NODShiLtJ_T0058833.1 MGP_NODShiLtJ_G0026673.1 mouse_genomes_project 2 184788227 184793048 + MGP_NODShiLtJ_P0058833 Dbndd2 protein_coding protein_coding MGP_NODShiLtJ_T0058834.1 MGP_NODShiLtJ_G0026673.1 mouse_genomes_project 2 184788227 184792540 + MGP_NODShiLtJ_P0058834 Dbndd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058835.1 MGP_NODShiLtJ_G0026673.1 mouse_genomes_project 2 184788253 184791989 + MGP_NODShiLtJ_P0058835 Dbndd2 protein_coding protein_coding MGP_NODShiLtJ_T0058836.1 MGP_NODShiLtJ_G0026673.1 mouse_genomes_project 2 184788649 184795094 + MGP_NODShiLtJ_P0058836 Dbndd2 protein_coding protein_coding MGP_NODShiLtJ_T0058837.1 MGP_NODShiLtJ_G0026673.1 mouse_genomes_project 2 184789593 184792540 + MGP_NODShiLtJ_P0058837 Dbndd2 protein_coding protein_coding MGP_NODShiLtJ_T0053929.1 MGP_NODShiLtJ_G0025464.1 mouse_genomes_project 2 33158903 33211826 + MGP_NODShiLtJ_P0053929 Fam129b protein_coding protein_coding MGP_NODShiLtJ_T0053930.1 MGP_NODShiLtJ_G0025464.1 mouse_genomes_project 2 33179590 33194806 + MGP_NODShiLtJ_P0053930 Fam129b protein_coding protein_coding MGP_NODShiLtJ_T0053931.1 MGP_NODShiLtJ_G0025464.1 mouse_genomes_project 2 33195755 33197435 + Fam129b protein_coding retained_intron MGP_NODShiLtJ_T0053932.1 MGP_NODShiLtJ_G0025464.1 mouse_genomes_project 2 33201285 33207599 + Fam129b protein_coding processed_transcript MGP_NODShiLtJ_T0053933.1 MGP_NODShiLtJ_G0025464.1 mouse_genomes_project 2 33205215 33208681 + Fam129b protein_coding processed_transcript MGP_NODShiLtJ_T0053934.1 MGP_NODShiLtJ_G0025464.1 mouse_genomes_project 2 33208215 33210213 + Fam129b protein_coding processed_transcript MGP_NODShiLtJ_T0013683.1 MGP_NODShiLtJ_G0011791.1 mouse_genomes_project 2 164105874 164106186 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055542.1 MGP_NODShiLtJ_G0025867.1 mouse_genomes_project 2 98038158 98046143 - MGP_NODShiLtJ_P0055542 protein_coding protein_coding MGP_NODShiLtJ_T0013488.1 MGP_NODShiLtJ_G0011596.1 mouse_genomes_project 2 82213029 82213664 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056321.1 MGP_NODShiLtJ_G0026072.1 mouse_genomes_project 2 125716661 125717600 - MGP_NODShiLtJ_P0056321 Olfr1275 protein_coding protein_coding MGP_NODShiLtJ_T0003871.1 MGP_NODShiLtJ_G0003455.1 mouse_genomes_project 2 26115093 26122691 + Gm13563 antisense antisense MGP_NODShiLtJ_T0003872.1 MGP_NODShiLtJ_G0003455.1 mouse_genomes_project 2 26120984 26123227 + Gm13563 antisense antisense MGP_NODShiLtJ_T0003873.1 MGP_NODShiLtJ_G0003455.1 mouse_genomes_project 2 26122889 26125398 + Gm13563 antisense antisense MGP_NODShiLtJ_T0017616.1 MGP_NODShiLtJ_G0015281.1 mouse_genomes_project 2 31267062 31273569 - D330023K18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017617.1 MGP_NODShiLtJ_G0015281.1 mouse_genomes_project 2 31271913 31273569 - D330023K18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0052355.1 MGP_NODShiLtJ_G0025199.1 mouse_genomes_project 2 12348894 12401092 + MGP_NODShiLtJ_P0052355 Tmem236 protein_coding protein_coding MGP_NODShiLtJ_T0056585.1 MGP_NODShiLtJ_G0026161.1 mouse_genomes_project 2 135108193 135152429 + MGP_NODShiLtJ_P0056585 Chp1 protein_coding protein_coding MGP_NODShiLtJ_T0056586.1 MGP_NODShiLtJ_G0026161.1 mouse_genomes_project 2 135108220 135152419 + MGP_NODShiLtJ_P0056586 Chp1 protein_coding protein_coding MGP_NODShiLtJ_T0056587.1 MGP_NODShiLtJ_G0026161.1 mouse_genomes_project 2 135108311 135134907 + Chp1 protein_coding retained_intron MGP_NODShiLtJ_T0056588.1 MGP_NODShiLtJ_G0026161.1 mouse_genomes_project 2 135129758 135150044 + Chp1 protein_coding retained_intron MGP_NODShiLtJ_T0052132.1 MGP_NODShiLtJ_G0025166.1 mouse_genomes_project 2 3151733 3274008 + MGP_NODShiLtJ_P0052132 Upf2 protein_coding protein_coding MGP_NODShiLtJ_T0052133.1 MGP_NODShiLtJ_G0025166.1 mouse_genomes_project 2 3232268 3274003 + MGP_NODShiLtJ_P0052133 Upf2 protein_coding protein_coding MGP_NODShiLtJ_T0052134.1 MGP_NODShiLtJ_G0025166.1 mouse_genomes_project 2 3266715 3272807 + Upf2 protein_coding processed_transcript MGP_NODShiLtJ_T0056322.1 MGP_NODShiLtJ_G0026073.1 mouse_genomes_project 2 125766949 125767888 + MGP_NODShiLtJ_P0056322 Olfr1276 protein_coding protein_coding MGP_NODShiLtJ_T0013397.1 MGP_NODShiLtJ_G0011505.1 mouse_genomes_project 2 42359111 42359464 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054235.1 MGP_NODShiLtJ_G0025535.1 mouse_genomes_project 2 38247804 38248644 + Gpr21 protein_coding processed_transcript MGP_NODShiLtJ_T0054237.1 MGP_NODShiLtJ_G0025535.1 mouse_genomes_project 2 38248098 38252076 + MGP_NODShiLtJ_P0054237 Gpr21 protein_coding protein_coding MGP_NODShiLtJ_T0059382.1 MGP_NODShiLtJ_G0026803.1 mouse_genomes_project 2 201621080 201667535 + MGP_NODShiLtJ_P0059382 Osbpl2 protein_coding protein_coding MGP_NODShiLtJ_T0059383.1 MGP_NODShiLtJ_G0026803.1 mouse_genomes_project 2 201621109 201642106 + Osbpl2 protein_coding processed_transcript MGP_NODShiLtJ_T0059384.1 MGP_NODShiLtJ_G0026803.1 mouse_genomes_project 2 201621178 201664146 + Osbpl2 protein_coding retained_intron MGP_NODShiLtJ_T0059385.1 MGP_NODShiLtJ_G0026803.1 mouse_genomes_project 2 201654387 201656417 + Osbpl2 protein_coding retained_intron MGP_NODShiLtJ_T0013663.1 MGP_NODShiLtJ_G0011771.1 mouse_genomes_project 2 156355001 156355315 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004024.1 MGP_NODShiLtJ_G0003564.1 mouse_genomes_project 2 145641367 145664126 - AI847159 antisense antisense MGP_NODShiLtJ_T0004025.1 MGP_NODShiLtJ_G0003564.1 mouse_genomes_project 2 145661641 145664126 - AI847159 antisense antisense MGP_NODShiLtJ_T0004026.1 MGP_NODShiLtJ_G0003564.1 mouse_genomes_project 2 145661645 145662035 - AI847159 antisense antisense MGP_NODShiLtJ_T0004027.1 MGP_NODShiLtJ_G0003564.1 mouse_genomes_project 2 145661689 145664161 - AI847159 antisense antisense MGP_NODShiLtJ_T0010371.1 MGP_NODShiLtJ_G0008504.1 mouse_genomes_project 2 178425286 178425344 + Mir3474 miRNA miRNA MGP_NODShiLtJ_T0007378.1 MGP_NODShiLtJ_G0006044.1 mouse_genomes_project 2 202383181 202449140 - Gm14342 lincRNA lincRNA MGP_NODShiLtJ_T0055636.1 MGP_NODShiLtJ_G0025947.1 mouse_genomes_project 2 100784533 100834322 - MGP_NODShiLtJ_P0055636 protein_coding protein_coding MGP_NODShiLtJ_T0055579.1 MGP_NODShiLtJ_G0025902.1 mouse_genomes_project 2 99340966 99341902 - MGP_NODShiLtJ_P0055579 protein_coding protein_coding MGP_NODShiLtJ_T0055638.1 MGP_NODShiLtJ_G0025949.1 mouse_genomes_project 2 100848715 100849642 - MGP_NODShiLtJ_P0055638 Olfr32 protein_coding protein_coding MGP_NODShiLtJ_T0058853.1 MGP_NODShiLtJ_G0026679.1 mouse_genomes_project 2 184912829 184929700 - MGP_NODShiLtJ_P0058853 Wfdc8 protein_coding protein_coding MGP_NODShiLtJ_T0058854.1 MGP_NODShiLtJ_G0026679.1 mouse_genomes_project 2 184912837 184929473 - MGP_NODShiLtJ_P0058854 Wfdc8 protein_coding protein_coding MGP_NODShiLtJ_T0058855.1 MGP_NODShiLtJ_G0026679.1 mouse_genomes_project 2 184913583 184929700 - MGP_NODShiLtJ_P0058855 Wfdc8 protein_coding protein_coding MGP_NODShiLtJ_T0054384.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52349969 52402253 - MGP_NODShiLtJ_P0054384 protein_coding protein_coding MGP_NODShiLtJ_T0054385.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52352025 52358401 - protein_coding processed_transcript MGP_NODShiLtJ_T0054386.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52352461 52402208 - protein_coding processed_transcript MGP_NODShiLtJ_T0054387.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52359908 52402211 - protein_coding processed_transcript MGP_NODShiLtJ_T0054388.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52379221 52391912 - protein_coding processed_transcript MGP_NODShiLtJ_T0054389.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52381553 52402211 - MGP_NODShiLtJ_P0054389 protein_coding protein_coding MGP_NODShiLtJ_T0054390.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52386739 52402209 - protein_coding processed_transcript MGP_NODShiLtJ_T0054391.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52387035 52402218 - MGP_NODShiLtJ_P0054391 protein_coding protein_coding MGP_NODShiLtJ_T0054392.1 MGP_NODShiLtJ_G0025556.1 mouse_genomes_project 2 52387106 52403233 - MGP_NODShiLtJ_P0054392 protein_coding protein_coding MGP_NODShiLtJ_T0054825.1 MGP_NODShiLtJ_G0025635.1 mouse_genomes_project 2 76421187 76446477 + MGP_NODShiLtJ_P0054825 Bbs5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054826.1 MGP_NODShiLtJ_G0025635.1 mouse_genomes_project 2 76421224 76446708 + MGP_NODShiLtJ_P0054826 Bbs5 protein_coding protein_coding MGP_NODShiLtJ_T0054827.1 MGP_NODShiLtJ_G0025635.1 mouse_genomes_project 2 76421232 76446708 + MGP_NODShiLtJ_P0054827 Bbs5 protein_coding protein_coding MGP_NODShiLtJ_T0054828.1 MGP_NODShiLtJ_G0025635.1 mouse_genomes_project 2 76421246 76424494 + Bbs5 protein_coding retained_intron MGP_NODShiLtJ_T0054829.1 MGP_NODShiLtJ_G0025635.1 mouse_genomes_project 2 76421269 76429135 + Bbs5 protein_coding retained_intron MGP_NODShiLtJ_T0054830.1 MGP_NODShiLtJ_G0025635.1 mouse_genomes_project 2 76421279 76427979 + Bbs5 protein_coding retained_intron MGP_NODShiLtJ_T0054831.1 MGP_NODShiLtJ_G0025635.1 mouse_genomes_project 2 76430310 76444187 + Bbs5 protein_coding retained_intron MGP_NODShiLtJ_T0056049.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114772480 114866016 - MGP_NODShiLtJ_P0056049 Prr5l protein_coding protein_coding MGP_NODShiLtJ_T0056050.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114772480 114916767 - MGP_NODShiLtJ_P0056050 Prr5l protein_coding protein_coding MGP_NODShiLtJ_T0056051.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114774435 114866017 - MGP_NODShiLtJ_P0056051 Prr5l protein_coding protein_coding MGP_NODShiLtJ_T0056052.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114775443 114865959 - MGP_NODShiLtJ_P0056052 Prr5l protein_coding protein_coding MGP_NODShiLtJ_T0056053.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114800576 114916767 - MGP_NODShiLtJ_P0056053 Prr5l protein_coding protein_coding MGP_NODShiLtJ_T0056054.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114818958 114963456 - MGP_NODShiLtJ_P0056054 Prr5l protein_coding protein_coding MGP_NODShiLtJ_T0056055.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114835813 114866363 - MGP_NODShiLtJ_P0056055 Prr5l protein_coding protein_coding MGP_NODShiLtJ_T0056056.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114835857 114885258 - MGP_NODShiLtJ_P0056056 Prr5l protein_coding protein_coding MGP_NODShiLtJ_T0056057.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114835968 114866042 - Prr5l protein_coding processed_transcript MGP_NODShiLtJ_T0056058.1 MGP_NODShiLtJ_G0026016.1 mouse_genomes_project 2 114908845 114963469 - Prr5l protein_coding processed_transcript MGP_NODShiLtJ_T0010368.1 MGP_NODShiLtJ_G0008501.1 mouse_genomes_project 2 175989338 175989430 - Gm22759 miRNA miRNA MGP_NODShiLtJ_T0098010.1 MGP_NODShiLtJ_G0036422.1 mouse_genomes_project 2 127264410 127264524 - n-R5s202 rRNA rRNA MGP_NODShiLtJ_T0054174.1 MGP_NODShiLtJ_G0025501.1 mouse_genomes_project 2 36753371 36775832 + MGP_NODShiLtJ_P0054174 Ptgs1 protein_coding protein_coding MGP_NODShiLtJ_T0054175.1 MGP_NODShiLtJ_G0025501.1 mouse_genomes_project 2 36753501 36761637 + Ptgs1 protein_coding processed_transcript MGP_NODShiLtJ_T0054176.1 MGP_NODShiLtJ_G0025501.1 mouse_genomes_project 2 36759822 36775829 + Ptgs1 protein_coding processed_transcript MGP_NODShiLtJ_T0054177.1 MGP_NODShiLtJ_G0025501.1 mouse_genomes_project 2 36764286 36765042 + Ptgs1 protein_coding retained_intron MGP_NODShiLtJ_T0054178.1 MGP_NODShiLtJ_G0025501.1 mouse_genomes_project 2 36766048 36768779 + Ptgs1 protein_coding retained_intron MGP_NODShiLtJ_T0013560.1 MGP_NODShiLtJ_G0011668.1 mouse_genomes_project 2 108775751 108776421 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055436.1 MGP_NODShiLtJ_G0025772.1 mouse_genomes_project 2 94801715 94802645 - MGP_NODShiLtJ_P0055436 Olfr1016 protein_coding protein_coding MGP_NODShiLtJ_T0054260.1 MGP_NODShiLtJ_G0025538.1 mouse_genomes_project 2 39170610 39184821 + Lhx2 protein_coding retained_intron MGP_NODShiLtJ_T0054261.1 MGP_NODShiLtJ_G0025538.1 mouse_genomes_project 2 39172218 39185953 + MGP_NODShiLtJ_P0054261 Lhx2 protein_coding protein_coding MGP_NODShiLtJ_T0054262.1 MGP_NODShiLtJ_G0025538.1 mouse_genomes_project 2 39182895 39185759 + MGP_NODShiLtJ_P0054262 Lhx2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054263.1 MGP_NODShiLtJ_G0025538.1 mouse_genomes_project 2 39182901 39200810 + MGP_NODShiLtJ_P0054263 Lhx2 protein_coding protein_coding MGP_NODShiLtJ_T0054264.1 MGP_NODShiLtJ_G0025538.1 mouse_genomes_project 2 39183659 39185701 + MGP_NODShiLtJ_P0054264 Lhx2 protein_coding protein_coding MGP_NODShiLtJ_T0054265.1 MGP_NODShiLtJ_G0025538.1 mouse_genomes_project 2 39184929 39191210 + Lhx2 protein_coding retained_intron MGP_NODShiLtJ_T0053719.1 MGP_NODShiLtJ_G0025433.1 mouse_genomes_project 2 32258820 32297488 - MGP_NODShiLtJ_P0053719 Fam78a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053722.1 MGP_NODShiLtJ_G0025433.1 mouse_genomes_project 2 32276468 32296604 - MGP_NODShiLtJ_P0053722 Fam78a protein_coding protein_coding MGP_NODShiLtJ_T0053723.1 MGP_NODShiLtJ_G0025433.1 mouse_genomes_project 2 32279022 32292173 - Fam78a protein_coding processed_transcript MGP_NODShiLtJ_T0053724.1 MGP_NODShiLtJ_G0025433.1 mouse_genomes_project 2 32296092 32297676 - Fam78a protein_coding processed_transcript MGP_NODShiLtJ_T0054903.1 MGP_NODShiLtJ_G0025651.1 mouse_genomes_project 2 77614889 77733545 - Tlk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054904.1 MGP_NODShiLtJ_G0025651.1 mouse_genomes_project 2 77614889 77733876 - MGP_NODShiLtJ_P0054904 Tlk1 protein_coding protein_coding MGP_NODShiLtJ_T0054905.1 MGP_NODShiLtJ_G0025651.1 mouse_genomes_project 2 77616623 77620707 - Tlk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054906.1 MGP_NODShiLtJ_G0025651.1 mouse_genomes_project 2 77618794 77620387 - Tlk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054907.1 MGP_NODShiLtJ_G0025651.1 mouse_genomes_project 2 77648334 77733471 - Tlk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054908.1 MGP_NODShiLtJ_G0025651.1 mouse_genomes_project 2 77651568 77733459 - Tlk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054909.1 MGP_NODShiLtJ_G0025651.1 mouse_genomes_project 2 77653319 77733376 - Tlk1 protein_coding processed_transcript MGP_NODShiLtJ_T0059457.1 MGP_NODShiLtJ_G0026822.1 mouse_genomes_project 2 202494635 202515718 - MGP_NODShiLtJ_P0059457 Nkain4 protein_coding protein_coding MGP_NODShiLtJ_T0059458.1 MGP_NODShiLtJ_G0026822.1 mouse_genomes_project 2 202494635 202504067 - MGP_NODShiLtJ_P0059458 Nkain4 protein_coding protein_coding MGP_NODShiLtJ_T0059459.1 MGP_NODShiLtJ_G0026822.1 mouse_genomes_project 2 202494635 202515718 - MGP_NODShiLtJ_P0059459 Nkain4 protein_coding protein_coding MGP_NODShiLtJ_T0059460.1 MGP_NODShiLtJ_G0026822.1 mouse_genomes_project 2 202495853 202515639 - MGP_NODShiLtJ_P0059460 Nkain4 protein_coding protein_coding MGP_NODShiLtJ_T0059461.1 MGP_NODShiLtJ_G0026822.1 mouse_genomes_project 2 202497049 202515713 - MGP_NODShiLtJ_P0059461 Nkain4 protein_coding protein_coding MGP_NODShiLtJ_T0059462.1 MGP_NODShiLtJ_G0026822.1 mouse_genomes_project 2 202504153 202515338 - Nkain4 protein_coding processed_transcript MGP_NODShiLtJ_T0059463.1 MGP_NODShiLtJ_G0026822.1 mouse_genomes_project 2 202504730 202510575 - MGP_NODShiLtJ_P0059463 Nkain4 protein_coding protein_coding MGP_NODShiLtJ_T0055036.1 MGP_NODShiLtJ_G0025675.1 mouse_genomes_project 2 80598524 80699672 - MGP_NODShiLtJ_P0055036 Wipf1 protein_coding protein_coding MGP_NODShiLtJ_T0055037.1 MGP_NODShiLtJ_G0025675.1 mouse_genomes_project 2 80598953 80654760 - MGP_NODShiLtJ_P0055037 Wipf1 protein_coding protein_coding MGP_NODShiLtJ_T0055038.1 MGP_NODShiLtJ_G0025675.1 mouse_genomes_project 2 80601061 80623171 - MGP_NODShiLtJ_P0055038 Wipf1 protein_coding protein_coding MGP_NODShiLtJ_T0055039.1 MGP_NODShiLtJ_G0025675.1 mouse_genomes_project 2 80606325 80655466 - MGP_NODShiLtJ_P0055039 Wipf1 protein_coding protein_coding MGP_NODShiLtJ_T0055040.1 MGP_NODShiLtJ_G0025675.1 mouse_genomes_project 2 80613787 80621902 - MGP_NODShiLtJ_P0055040 Wipf1 protein_coding protein_coding MGP_NODShiLtJ_T0055041.1 MGP_NODShiLtJ_G0025675.1 mouse_genomes_project 2 80613847 80699417 - Wipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0055042.1 MGP_NODShiLtJ_G0025675.1 mouse_genomes_project 2 80617267 80699320 - Wipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0058720.1 MGP_NODShiLtJ_G0026636.1 mouse_genomes_project 2 183198132 183229231 + MGP_NODShiLtJ_P0058720 Ift52 protein_coding protein_coding MGP_NODShiLtJ_T0058721.1 MGP_NODShiLtJ_G0026636.1 mouse_genomes_project 2 183198269 183215082 + MGP_NODShiLtJ_P0058721 Ift52 protein_coding protein_coding MGP_NODShiLtJ_T0058722.1 MGP_NODShiLtJ_G0026636.1 mouse_genomes_project 2 183198297 183206009 + Ift52 protein_coding processed_transcript MGP_NODShiLtJ_T0058723.1 MGP_NODShiLtJ_G0026636.1 mouse_genomes_project 2 183204910 183212247 + Ift52 protein_coding processed_transcript MGP_NODShiLtJ_T0007322.1 MGP_NODShiLtJ_G0005995.1 mouse_genomes_project 2 181226272 181226864 - Gm14242 lincRNA lincRNA MGP_NODShiLtJ_T0013710.1 MGP_NODShiLtJ_G0011818.1 mouse_genomes_project 2 174976693 174978084 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004051.1 MGP_NODShiLtJ_G0003580.1 mouse_genomes_project 2 159206898 159213439 - Macrod2os2 antisense antisense MGP_NODShiLtJ_T0004053.1 MGP_NODShiLtJ_G0003580.1 mouse_genomes_project 2 159209212 159209599 - Macrod2os2 antisense antisense MGP_NODShiLtJ_T0055537.1 MGP_NODShiLtJ_G0025862.1 mouse_genomes_project 2 97946854 97947799 - MGP_NODShiLtJ_P0055537 Olfr1155 protein_coding protein_coding MGP_NODShiLtJ_T0055471.1 MGP_NODShiLtJ_G0025806.1 mouse_genomes_project 2 95868971 95869919 - MGP_NODShiLtJ_P0055471 Olfr1079 protein_coding protein_coding MGP_NODShiLtJ_T0058984.1 MGP_NODShiLtJ_G0026709.1 mouse_genomes_project 2 185756010 185774702 - MGP_NODShiLtJ_P0058984 Zfp663 protein_coding protein_coding MGP_NODShiLtJ_T0058985.1 MGP_NODShiLtJ_G0026709.1 mouse_genomes_project 2 185756011 185765515 - MGP_NODShiLtJ_P0058985 Zfp663 protein_coding protein_coding MGP_NODShiLtJ_T0058986.1 MGP_NODShiLtJ_G0026709.1 mouse_genomes_project 2 185758524 185764780 - Zfp663 protein_coding processed_transcript MGP_NODShiLtJ_T0058987.1 MGP_NODShiLtJ_G0026709.1 mouse_genomes_project 2 185758757 185774696 - MGP_NODShiLtJ_P0058987 Zfp663 protein_coding protein_coding MGP_NODShiLtJ_T0054620.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 65943511 66024025 - MGP_NODShiLtJ_P0054620 Itgb6 protein_coding protein_coding MGP_NODShiLtJ_T0054621.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 65945454 66072990 - MGP_NODShiLtJ_P0054621 Itgb6 protein_coding protein_coding MGP_NODShiLtJ_T0054622.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 65949468 66072990 - MGP_NODShiLtJ_P0054622 Itgb6 protein_coding protein_coding MGP_NODShiLtJ_T0054623.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 65950362 66024040 - MGP_NODShiLtJ_P0054623 Itgb6 protein_coding protein_coding MGP_NODShiLtJ_T0054624.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 65986175 66024007 - Itgb6 protein_coding processed_transcript MGP_NODShiLtJ_T0054625.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 66004791 66024068 - Itgb6 protein_coding processed_transcript MGP_NODShiLtJ_T0054626.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 66019561 66024017 - Itgb6 protein_coding processed_transcript MGP_NODShiLtJ_T0054627.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 66024957 66055939 - Itgb6 protein_coding processed_transcript MGP_NODShiLtJ_T0054628.1 MGP_NODShiLtJ_G0025599.1 mouse_genomes_project 2 66043724 66055916 - Itgb6 protein_coding processed_transcript MGP_NODShiLtJ_T0058856.1 MGP_NODShiLtJ_G0026680.1 mouse_genomes_project 2 184955783 184959891 - MGP_NODShiLtJ_P0058856 Wfdc16 protein_coding protein_coding MGP_NODShiLtJ_T0056443.1 MGP_NODShiLtJ_G0026124.1 mouse_genomes_project 2 132465836 132545284 + MGP_NODShiLtJ_P0056443 Spred1 protein_coding protein_coding MGP_NODShiLtJ_T0056444.1 MGP_NODShiLtJ_G0026124.1 mouse_genomes_project 2 132466100 132535853 + MGP_NODShiLtJ_P0056444 Spred1 protein_coding protein_coding MGP_NODShiLtJ_T0007252.1 MGP_NODShiLtJ_G0005938.1 mouse_genomes_project 2 133256851 133344416 + 4930412B13Rik lincRNA lincRNA MGP_NODShiLtJ_T0055590.1 MGP_NODShiLtJ_G0025912.1 mouse_genomes_project 2 99569714 99570650 - MGP_NODShiLtJ_P0055590 Olfr1223 protein_coding protein_coding MGP_NODShiLtJ_T0010340.1 MGP_NODShiLtJ_G0008473.1 mouse_genomes_project 2 119422479 119422604 + Gm22002 miRNA miRNA MGP_NODShiLtJ_T0055483.1 MGP_NODShiLtJ_G0025818.1 mouse_genomes_project 2 96458945 96459884 - MGP_NODShiLtJ_P0055483 Olfr1099 protein_coding protein_coding MGP_NODShiLtJ_T0007264.1 MGP_NODShiLtJ_G0005948.1 mouse_genomes_project 2 144631315 144646668 + Gm14009 lincRNA lincRNA MGP_NODShiLtJ_T0056962.1 MGP_NODShiLtJ_G0026225.1 mouse_genomes_project 2 138003269 138024905 + MGP_NODShiLtJ_P0056962 Terb2 protein_coding protein_coding MGP_NODShiLtJ_T0056963.1 MGP_NODShiLtJ_G0026225.1 mouse_genomes_project 2 138003471 138023471 + Terb2 protein_coding processed_transcript MGP_NODShiLtJ_T0054186.1 MGP_NODShiLtJ_G0025509.1 mouse_genomes_project 2 37296162 37297092 + MGP_NODShiLtJ_P0054186 Olfr346 protein_coding protein_coding MGP_NODShiLtJ_T0059032.1 MGP_NODShiLtJ_G0026719.1 mouse_genomes_project 2 186591323 186676598 - Sulf2 protein_coding processed_transcript MGP_NODShiLtJ_T0059033.1 MGP_NODShiLtJ_G0026719.1 mouse_genomes_project 2 186591843 186593190 - Sulf2 protein_coding retained_intron MGP_NODShiLtJ_T0059034.1 MGP_NODShiLtJ_G0026719.1 mouse_genomes_project 2 186591959 186675829 - MGP_NODShiLtJ_P0059034 Sulf2 protein_coding protein_coding MGP_NODShiLtJ_T0059035.1 MGP_NODShiLtJ_G0026719.1 mouse_genomes_project 2 186591986 186595290 - Sulf2 protein_coding processed_transcript MGP_NODShiLtJ_T0059036.1 MGP_NODShiLtJ_G0026719.1 mouse_genomes_project 2 186610884 186675799 - Sulf2 protein_coding processed_transcript MGP_NODShiLtJ_T0059037.1 MGP_NODShiLtJ_G0026719.1 mouse_genomes_project 2 186652586 186675416 - Sulf2 protein_coding processed_transcript MGP_NODShiLtJ_T0101808.1 MGP_NODShiLtJ_G0039976.1 mouse_genomes_project 2 95227865 95228822 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0056327.1 MGP_NODShiLtJ_G0026078.1 mouse_genomes_project 2 125919513 125920798 + MGP_NODShiLtJ_P0056327 Olfr1283 protein_coding protein_coding MGP_NODShiLtJ_T0013476.1 MGP_NODShiLtJ_G0011584.1 mouse_genomes_project 2 78786385 78786915 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057210.1 MGP_NODShiLtJ_G0026286.1 mouse_genomes_project 2 144218996 144254573 - MGP_NODShiLtJ_P0057210 Bub1 protein_coding protein_coding MGP_NODShiLtJ_T0057211.1 MGP_NODShiLtJ_G0026286.1 mouse_genomes_project 2 144222975 144223738 - Bub1 protein_coding retained_intron MGP_NODShiLtJ_T0057212.1 MGP_NODShiLtJ_G0026286.1 mouse_genomes_project 2 144231374 144235755 - Bub1 protein_coding processed_transcript MGP_NODShiLtJ_T0057213.1 MGP_NODShiLtJ_G0026286.1 mouse_genomes_project 2 144245048 144254512 - Bub1 protein_coding retained_intron MGP_NODShiLtJ_T0055477.1 MGP_NODShiLtJ_G0025812.1 mouse_genomes_project 2 96150699 96151635 - MGP_NODShiLtJ_P0055477 Olfr1089 protein_coding protein_coding MGP_NODShiLtJ_T0055478.1 MGP_NODShiLtJ_G0025813.1 mouse_genomes_project 2 96180268 96181210 - MGP_NODShiLtJ_P0055478 Olfr1090 protein_coding protein_coding MGP_NODShiLtJ_T0017587.1 MGP_NODShiLtJ_G0015264.1 mouse_genomes_project 2 12258602 12261622 - Stamos processed_transcript antisense MGP_NODShiLtJ_T0017588.1 MGP_NODShiLtJ_G0015264.1 mouse_genomes_project 2 12260175 12261536 - Stamos processed_transcript retained_intron MGP_NODShiLtJ_T0055118.1 MGP_NODShiLtJ_G0025698.1 mouse_genomes_project 2 83393844 83396978 - MGP_NODShiLtJ_P0055118 Ttc30a1 protein_coding protein_coding MGP_NODShiLtJ_T0097795.1 MGP_NODShiLtJ_G0036207.1 mouse_genomes_project 2 22081121 22081537 - pseudogene pseudogene MGP_NODShiLtJ_T0055881.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103159487 103352207 + MGP_NODShiLtJ_P0055881 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055882.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103159556 103352213 + MGP_NODShiLtJ_P0055882 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055883.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103159649 103196220 + Phf21a protein_coding processed_transcript MGP_NODShiLtJ_T0055884.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103159657 103351271 + MGP_NODShiLtJ_P0055884 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055885.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103159657 103309456 + MGP_NODShiLtJ_P0055885 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055886.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103159683 103196729 + Phf21a protein_coding retained_intron MGP_NODShiLtJ_T0055887.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103159683 103203716 + MGP_NODShiLtJ_P0055887 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055888.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103161856 103203719 + MGP_NODShiLtJ_P0055888 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055889.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103161880 103351279 + MGP_NODShiLtJ_P0055889 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055890.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103162862 103203731 + MGP_NODShiLtJ_P0055890 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055891.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103194319 103355051 + MGP_NODShiLtJ_P0055891 Phf21a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055892.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103196179 103213753 + MGP_NODShiLtJ_P0055892 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055893.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103203571 103355044 + MGP_NODShiLtJ_P0055893 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055894.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103203571 103355044 + MGP_NODShiLtJ_P0055894 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055895.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103203571 103355044 + MGP_NODShiLtJ_P0055895 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055896.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103203571 103355044 + MGP_NODShiLtJ_P0055896 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055897.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103203688 103355044 + MGP_NODShiLtJ_P0055897 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055898.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103203696 103316291 + MGP_NODShiLtJ_P0055898 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055899.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103213756 103350808 + MGP_NODShiLtJ_P0055899 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055900.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103309615 103321178 + MGP_NODShiLtJ_P0055900 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055901.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103321206 103349555 + MGP_NODShiLtJ_P0055901 Phf21a protein_coding protein_coding MGP_NODShiLtJ_T0055902.1 MGP_NODShiLtJ_G0025987.1 mouse_genomes_project 2 103339288 103347371 + Phf21a protein_coding retained_intron MGP_NODShiLtJ_T0056579.1 MGP_NODShiLtJ_G0026159.1 mouse_genomes_project 2 134920843 135029450 - MGP_NODShiLtJ_P0056579 Ino80 protein_coding protein_coding MGP_NODShiLtJ_T0056580.1 MGP_NODShiLtJ_G0026159.1 mouse_genomes_project 2 134950076 135029376 - MGP_NODShiLtJ_P0056580 Ino80 protein_coding protein_coding MGP_NODShiLtJ_T0056581.1 MGP_NODShiLtJ_G0026159.1 mouse_genomes_project 2 134982492 134990404 - Ino80 protein_coding retained_intron MGP_NODShiLtJ_T0056528.1 MGP_NODShiLtJ_G0026145.1 mouse_genomes_project 2 134557576 134562385 + MGP_NODShiLtJ_P0056528 Rpusd2 protein_coding protein_coding MGP_NODShiLtJ_T0007265.1 MGP_NODShiLtJ_G0005949.1 mouse_genomes_project 2 144679655 144681606 - Gm14012 lincRNA lincRNA MGP_NODShiLtJ_T0057005.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138716781 138764162 + MGP_NODShiLtJ_P0057005 Sqrdl protein_coding protein_coding MGP_NODShiLtJ_T0057006.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138716933 138737780 + MGP_NODShiLtJ_P0057006 Sqrdl protein_coding protein_coding MGP_NODShiLtJ_T0057007.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138716935 138737787 + MGP_NODShiLtJ_P0057007 Sqrdl protein_coding protein_coding MGP_NODShiLtJ_T0057008.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138716953 138720084 + Sqrdl protein_coding processed_transcript MGP_NODShiLtJ_T0057009.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138724387 138755049 + Sqrdl protein_coding retained_intron MGP_NODShiLtJ_T0057010.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138734679 138764146 + MGP_NODShiLtJ_P0057010 Sqrdl protein_coding protein_coding MGP_NODShiLtJ_T0057011.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138737635 138740647 + Sqrdl protein_coding processed_transcript MGP_NODShiLtJ_T0057012.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138737652 138763931 + MGP_NODShiLtJ_P0057012 Sqrdl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057013.1 MGP_NODShiLtJ_G0026238.1 mouse_genomes_project 2 138749969 138764152 + MGP_NODShiLtJ_P0057013 Sqrdl protein_coding protein_coding MGP_NODShiLtJ_T0059399.1 MGP_NODShiLtJ_G0026806.1 mouse_genomes_project 2 201769182 201770251 + MGP_NODShiLtJ_P0059399 Rps21 protein_coding protein_coding MGP_NODShiLtJ_T0059400.1 MGP_NODShiLtJ_G0026806.1 mouse_genomes_project 2 201769184 201770248 + Rps21 protein_coding retained_intron MGP_NODShiLtJ_T0059401.1 MGP_NODShiLtJ_G0026806.1 mouse_genomes_project 2 201769223 201769800 + Rps21 protein_coding retained_intron MGP_NODShiLtJ_T0059402.1 MGP_NODShiLtJ_G0026806.1 mouse_genomes_project 2 201769223 201769949 + Rps21 protein_coding retained_intron MGP_NODShiLtJ_T0052831.1 MGP_NODShiLtJ_G0025283.1 mouse_genomes_project 2 25081479 25083396 + MGP_NODShiLtJ_P0052831 Fut7 protein_coding protein_coding MGP_NODShiLtJ_T0052832.1 MGP_NODShiLtJ_G0025283.1 mouse_genomes_project 2 25081591 25084584 + MGP_NODShiLtJ_P0052832 Fut7 protein_coding protein_coding MGP_NODShiLtJ_T0052833.1 MGP_NODShiLtJ_G0025283.1 mouse_genomes_project 2 25081765 25084587 + MGP_NODShiLtJ_P0052833 Fut7 protein_coding protein_coding MGP_NODShiLtJ_T0052834.1 MGP_NODShiLtJ_G0025283.1 mouse_genomes_project 2 25081906 25084587 + MGP_NODShiLtJ_P0052834 Fut7 protein_coding protein_coding MGP_NODShiLtJ_T0052835.1 MGP_NODShiLtJ_G0025283.1 mouse_genomes_project 2 25082860 25083304 + Fut7 protein_coding processed_transcript MGP_NODShiLtJ_T0052235.1 MGP_NODShiLtJ_G0025182.1 mouse_genomes_project 2 9517315 9534490 - MGP_NODShiLtJ_P0052235 Rbm17 protein_coding protein_coding MGP_NODShiLtJ_T0052236.1 MGP_NODShiLtJ_G0025182.1 mouse_genomes_project 2 9517317 9517869 - Rbm17 protein_coding retained_intron MGP_NODShiLtJ_T0052237.1 MGP_NODShiLtJ_G0025182.1 mouse_genomes_project 2 9517319 9519047 - Rbm17 protein_coding retained_intron MGP_NODShiLtJ_T0052238.1 MGP_NODShiLtJ_G0025182.1 mouse_genomes_project 2 9519269 9520860 - Rbm17 protein_coding retained_intron MGP_NODShiLtJ_T0052239.1 MGP_NODShiLtJ_G0025182.1 mouse_genomes_project 2 9520793 9522737 - Rbm17 protein_coding retained_intron MGP_NODShiLtJ_T0052240.1 MGP_NODShiLtJ_G0025182.1 mouse_genomes_project 2 9528144 9535377 - MGP_NODShiLtJ_P0052240 Rbm17 protein_coding protein_coding MGP_NODShiLtJ_T0055368.1 MGP_NODShiLtJ_G0025744.1 mouse_genomes_project 2 93551563 93553050 - MGP_NODShiLtJ_P0055368 Gm19426 protein_coding protein_coding MGP_NODShiLtJ_T0007162.1 MGP_NODShiLtJ_G0005867.1 mouse_genomes_project 2 78742531 78753927 + Platr26 lincRNA lincRNA MGP_NODShiLtJ_T0052587.1 MGP_NODShiLtJ_G0025244.1 mouse_genomes_project 2 23823387 23827282 + MGP_NODShiLtJ_P0052587 Il1f5 protein_coding protein_coding MGP_NODShiLtJ_T0052588.1 MGP_NODShiLtJ_G0025244.1 mouse_genomes_project 2 23823644 23825452 + Il1f5 protein_coding retained_intron MGP_NODShiLtJ_T0052589.1 MGP_NODShiLtJ_G0025244.1 mouse_genomes_project 2 23823655 23828003 + Il1f5 protein_coding processed_transcript MGP_NODShiLtJ_T0052590.1 MGP_NODShiLtJ_G0025244.1 mouse_genomes_project 2 23823872 23827746 + MGP_NODShiLtJ_P0052590 Il1f5 protein_coding protein_coding MGP_NODShiLtJ_T0013545.1 MGP_NODShiLtJ_G0011653.1 mouse_genomes_project 2 102231337 102231505 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013345.1 MGP_NODShiLtJ_G0011453.1 mouse_genomes_project 2 22859272 22859720 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055489.1 MGP_NODShiLtJ_G0025824.1 mouse_genomes_project 2 96625218 96626157 - MGP_NODShiLtJ_P0055489 Olfr1106 protein_coding protein_coding MGP_NODShiLtJ_T0053339.1 MGP_NODShiLtJ_G0025379.1 mouse_genomes_project 2 29757823 29761749 + Gm13547 protein_coding processed_transcript MGP_NODShiLtJ_T0053341.1 MGP_NODShiLtJ_G0025379.1 mouse_genomes_project 2 29759870 32529334 + MGP_NODShiLtJ_P0053341 Gm13547 protein_coding protein_coding MGP_NODShiLtJ_T0052241.1 MGP_NODShiLtJ_G0025183.1 mouse_genomes_project 2 9558952 9559611 - MGP_NODShiLtJ_P0052241 Gm17490 protein_coding protein_coding MGP_NODShiLtJ_T0053155.1 MGP_NODShiLtJ_G0025344.1 mouse_genomes_project 2 26773094 26780017 + MGP_NODShiLtJ_P0053155 Cacfd1 protein_coding protein_coding MGP_NODShiLtJ_T0053156.1 MGP_NODShiLtJ_G0025344.1 mouse_genomes_project 2 26773094 26780592 + MGP_NODShiLtJ_P0053156 Cacfd1 protein_coding protein_coding MGP_NODShiLtJ_T0053157.1 MGP_NODShiLtJ_G0025344.1 mouse_genomes_project 2 26773094 26784478 + MGP_NODShiLtJ_P0053157 Cacfd1 protein_coding protein_coding MGP_NODShiLtJ_T0053158.1 MGP_NODShiLtJ_G0025344.1 mouse_genomes_project 2 26773094 26784478 + MGP_NODShiLtJ_P0053158 Cacfd1 protein_coding protein_coding MGP_NODShiLtJ_T0053159.1 MGP_NODShiLtJ_G0025344.1 mouse_genomes_project 2 26773181 26781589 + Cacfd1 protein_coding processed_transcript MGP_NODShiLtJ_T0053160.1 MGP_NODShiLtJ_G0025344.1 mouse_genomes_project 2 26773250 26779071 + MGP_NODShiLtJ_P0053160 Cacfd1 protein_coding protein_coding MGP_NODShiLtJ_T0053161.1 MGP_NODShiLtJ_G0025344.1 mouse_genomes_project 2 26773761 26783687 + MGP_NODShiLtJ_P0053161 Cacfd1 protein_coding protein_coding MGP_NODShiLtJ_T0053162.1 MGP_NODShiLtJ_G0025344.1 mouse_genomes_project 2 26778750 26780603 + Cacfd1 protein_coding retained_intron MGP_NODShiLtJ_T0007242.1 MGP_NODShiLtJ_G0005931.1 mouse_genomes_project 2 131292869 131294095 - 2700033N17Rik lincRNA lincRNA MGP_NODShiLtJ_T0059293.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195644795 195702402 + MGP_NODShiLtJ_P0059293 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059294.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195644795 195658121 + MGP_NODShiLtJ_P0059294 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059295.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195645833 195702402 + MGP_NODShiLtJ_P0059295 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059296.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195659085 195710812 + Gnas protein_coding processed_transcript MGP_NODShiLtJ_T0059297.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195659085 195664061 + MGP_NODShiLtJ_P0059297 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059298.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195659085 195711022 + MGP_NODShiLtJ_P0059298 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059299.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195659085 195710812 + MGP_NODShiLtJ_P0059299 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059300.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195659085 195711054 + MGP_NODShiLtJ_P0059300 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059301.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195690873 195709551 + Gnas protein_coding processed_transcript MGP_NODShiLtJ_T0059302.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195691002 195710812 + Gnas protein_coding processed_transcript MGP_NODShiLtJ_T0059303.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195691033 195692248 + Gnas protein_coding processed_transcript MGP_NODShiLtJ_T0059304.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195691060 195702402 + Gnas protein_coding processed_transcript MGP_NODShiLtJ_T0059305.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195691327 195709589 + Gnas protein_coding processed_transcript MGP_NODShiLtJ_T0059306.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195693306 195711054 + MGP_NODShiLtJ_P0059306 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059307.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195693397 195711054 + MGP_NODShiLtJ_P0059307 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059308.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195693587 195702402 + MGP_NODShiLtJ_P0059308 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059309.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195693596 195710698 + MGP_NODShiLtJ_P0059309 Gnas protein_coding protein_coding MGP_NODShiLtJ_T0059311.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195706013 195709719 + Gnas protein_coding retained_intron MGP_NODShiLtJ_T0059312.1 MGP_NODShiLtJ_G0026782.1 mouse_genomes_project 2 195708959 195710038 + Gnas protein_coding retained_intron MGP_NODShiLtJ_T0013645.1 MGP_NODShiLtJ_G0011753.1 mouse_genomes_project 2 147602839 147603427 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056854.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137018073 137062396 - MGP_NODShiLtJ_P0056854 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056855.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137018073 137062393 - MGP_NODShiLtJ_P0056855 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056856.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137018073 137058063 - MGP_NODShiLtJ_P0056856 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056857.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137018390 137058031 - MGP_NODShiLtJ_P0056857 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056858.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137018397 137062459 - MGP_NODShiLtJ_P0056858 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056859.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137029180 137044071 - MGP_NODShiLtJ_P0056859 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056860.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137029215 137041661 - MGP_NODShiLtJ_P0056860 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056861.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137029293 137043641 - MGP_NODShiLtJ_P0056861 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056862.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137035158 137044067 - MGP_NODShiLtJ_P0056862 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0056863.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137035937 137043931 - Ppip5k1 protein_coding retained_intron MGP_NODShiLtJ_T0056864.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137039279 137062140 - Ppip5k1 protein_coding retained_intron MGP_NODShiLtJ_T0056865.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137041401 137048887 - Ppip5k1 protein_coding retained_intron MGP_NODShiLtJ_T0056866.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137047274 137062374 - Ppip5k1 protein_coding retained_intron MGP_NODShiLtJ_T0056867.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137050437 137055840 - MGP_NODShiLtJ_P0056867 Ppip5k1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056868.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137053653 137062393 - Ppip5k1 protein_coding retained_intron MGP_NODShiLtJ_T0056869.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137054072 137062138 - Ppip5k1 protein_coding retained_intron MGP_NODShiLtJ_T0056870.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137055240 137062135 - Ppip5k1 protein_coding retained_intron MGP_NODShiLtJ_T0056871.1 MGP_NODShiLtJ_G0026203.1 mouse_genomes_project 2 137057522 137062347 - MGP_NODShiLtJ_P0056871 Ppip5k1 protein_coding protein_coding MGP_NODShiLtJ_T0059191.1 MGP_NODShiLtJ_G0026750.1 mouse_genomes_project 2 190569724 190871438 + MGP_NODShiLtJ_P0059191 Tshz2 protein_coding protein_coding MGP_NODShiLtJ_T0059192.1 MGP_NODShiLtJ_G0026750.1 mouse_genomes_project 2 190570381 190843362 + MGP_NODShiLtJ_P0059192 Tshz2 protein_coding protein_coding MGP_NODShiLtJ_T0059193.1 MGP_NODShiLtJ_G0026750.1 mouse_genomes_project 2 190839750 191037740 + MGP_NODShiLtJ_P0059193 Tshz2 protein_coding protein_coding MGP_NODShiLtJ_T0059194.1 MGP_NODShiLtJ_G0026750.1 mouse_genomes_project 2 190839750 191037740 + MGP_NODShiLtJ_P0059194 Tshz2 protein_coding protein_coding MGP_NODShiLtJ_T0059195.1 MGP_NODShiLtJ_G0026750.1 mouse_genomes_project 2 190840692 190871438 + MGP_NODShiLtJ_P0059195 Tshz2 protein_coding protein_coding MGP_NODShiLtJ_T0013573.1 MGP_NODShiLtJ_G0011681.1 mouse_genomes_project 2 115301594 115302562 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057435.1 MGP_NODShiLtJ_G0026339.1 mouse_genomes_project 2 147765993 147766712 + MGP_NODShiLtJ_P0057435 Gm11037 protein_coding protein_coding MGP_NODShiLtJ_T0055070.1 MGP_NODShiLtJ_G0025679.1 mouse_genomes_project 2 81136004 81138884 - MGP_NODShiLtJ_P0055070 Atp5g3 protein_coding protein_coding MGP_NODShiLtJ_T0055071.1 MGP_NODShiLtJ_G0025679.1 mouse_genomes_project 2 81136004 81138883 - MGP_NODShiLtJ_P0055071 Atp5g3 protein_coding protein_coding MGP_NODShiLtJ_T0055072.1 MGP_NODShiLtJ_G0025679.1 mouse_genomes_project 2 81136288 81138840 - Atp5g3 protein_coding processed_transcript MGP_NODShiLtJ_T0055073.1 MGP_NODShiLtJ_G0025679.1 mouse_genomes_project 2 81136740 81138017 - Atp5g3 protein_coding processed_transcript MGP_NODShiLtJ_T0055074.1 MGP_NODShiLtJ_G0025679.1 mouse_genomes_project 2 81136875 81138849 - Atp5g3 protein_coding processed_transcript MGP_NODShiLtJ_T0007274.1 MGP_NODShiLtJ_G0005955.1 mouse_genomes_project 2 149745496 149746860 + Gm14102 lincRNA lincRNA MGP_NODShiLtJ_T0010361.1 MGP_NODShiLtJ_G0008494.1 mouse_genomes_project 2 164285934 164286122 + Gm25026 miRNA miRNA MGP_NODShiLtJ_T0013700.1 MGP_NODShiLtJ_G0011808.1 mouse_genomes_project 2 170795170 170795622 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007310.1 MGP_NODShiLtJ_G0005985.1 mouse_genomes_project 2 176034357 176038082 - Gm14224 lincRNA lincRNA MGP_NODShiLtJ_T0057358.1 MGP_NODShiLtJ_G0026323.1 mouse_genomes_project 2 147009473 147116128 + MGP_NODShiLtJ_P0057358 Ptpra protein_coding protein_coding MGP_NODShiLtJ_T0057359.1 MGP_NODShiLtJ_G0026323.1 mouse_genomes_project 2 147009739 147116125 + MGP_NODShiLtJ_P0057359 Ptpra protein_coding protein_coding MGP_NODShiLtJ_T0057360.1 MGP_NODShiLtJ_G0026323.1 mouse_genomes_project 2 147065097 147115570 + MGP_NODShiLtJ_P0057360 Ptpra protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052539.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131626 22240700 - MGP_NODShiLtJ_P0052539 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052540.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131626 22240746 - MGP_NODShiLtJ_P0052540 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052541.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131639 22240746 - MGP_NODShiLtJ_P0052541 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052542.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131861 22240627 - MGP_NODShiLtJ_P0052542 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052543.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131917 22240642 - MGP_NODShiLtJ_P0052543 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052544.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131917 22240692 - MGP_NODShiLtJ_P0052544 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052545.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131917 22240609 - MGP_NODShiLtJ_P0052545 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052546.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131922 22240690 - MGP_NODShiLtJ_P0052546 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052547.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22131922 22240735 - MGP_NODShiLtJ_P0052547 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052548.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22132445 22240645 - MGP_NODShiLtJ_P0052548 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052549.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22132786 22240724 - MGP_NODShiLtJ_P0052549 Abi1 protein_coding protein_coding MGP_NODShiLtJ_T0052550.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22133361 22138536 - Abi1 protein_coding retained_intron MGP_NODShiLtJ_T0052551.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22133365 22142194 - Abi1 protein_coding retained_intron MGP_NODShiLtJ_T0052552.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22138008 22152736 - Abi1 protein_coding retained_intron MGP_NODShiLtJ_T0052553.1 MGP_NODShiLtJ_G0025232.1 mouse_genomes_project 2 22142117 22154495 - Abi1 protein_coding retained_intron MGP_NODShiLtJ_T0052930.1 MGP_NODShiLtJ_G0025302.1 mouse_genomes_project 2 25353575 25358398 + MGP_NODShiLtJ_P0052930 Lcn6 protein_coding protein_coding MGP_NODShiLtJ_T0052931.1 MGP_NODShiLtJ_G0025302.1 mouse_genomes_project 2 25356055 25358395 + MGP_NODShiLtJ_P0052931 Lcn6 protein_coding protein_coding MGP_NODShiLtJ_T0052932.1 MGP_NODShiLtJ_G0025302.1 mouse_genomes_project 2 25356750 25358391 + MGP_NODShiLtJ_P0052932 Lcn6 protein_coding protein_coding MGP_NODShiLtJ_T0052933.1 MGP_NODShiLtJ_G0025302.1 mouse_genomes_project 2 25356902 25358391 + Lcn6 protein_coding processed_transcript MGP_NODShiLtJ_T0013566.1 MGP_NODShiLtJ_G0011674.1 mouse_genomes_project 2 112860456 112860640 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013453.1 MGP_NODShiLtJ_G0011561.1 mouse_genomes_project 2 67478627 67478946 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013646.1 MGP_NODShiLtJ_G0011754.1 mouse_genomes_project 2 147602852 147603422 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055516.1 MGP_NODShiLtJ_G0025843.1 mouse_genomes_project 2 97383226 97384528 - MGP_NODShiLtJ_P0055516 protein_coding protein_coding MGP_NODShiLtJ_T0056459.1 MGP_NODShiLtJ_G0026129.1 mouse_genomes_project 2 133748452 133853783 - MGP_NODShiLtJ_P0056459 Gpr176 protein_coding protein_coding MGP_NODShiLtJ_T0055521.1 MGP_NODShiLtJ_G0025848.1 mouse_genomes_project 2 97524248 97525172 + MGP_NODShiLtJ_P0055521 protein_coding protein_coding MGP_NODShiLtJ_T0013328.1 MGP_NODShiLtJ_G0011436.1 mouse_genomes_project 2 17399596 17399669 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017605.1 MGP_NODShiLtJ_G0015273.1 mouse_genomes_project 2 26197088 26199748 + processed_transcript processed_transcript MGP_NODShiLtJ_T0057997.1 MGP_NODShiLtJ_G0026489.1 mouse_genomes_project 2 171767183 171773409 - Defb45 protein_coding processed_transcript MGP_NODShiLtJ_T0057998.1 MGP_NODShiLtJ_G0026489.1 mouse_genomes_project 2 171767183 171770512 - MGP_NODShiLtJ_P0057998 Defb45 protein_coding protein_coding MGP_NODShiLtJ_T0010325.1 MGP_NODShiLtJ_G0008458.1 mouse_genomes_project 2 93550509 93550573 - Mir130a miRNA miRNA MGP_NODShiLtJ_T0017725.1 MGP_NODShiLtJ_G0015339.1 mouse_genomes_project 2 147105838 147127553 - 4930473A02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0013752.1 MGP_NODShiLtJ_G0011860.1 mouse_genomes_project 2 189240601 189241446 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0051999.1 MGP_NODShiLtJ_G0025143.1 mouse_genomes_project 2 297395 307561 + MGP_NODShiLtJ_P0051999 Acbd7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052000.1 MGP_NODShiLtJ_G0025143.1 mouse_genomes_project 2 301594 307554 + MGP_NODShiLtJ_P0052000 Acbd7 protein_coding protein_coding MGP_NODShiLtJ_T0001075.1 MGP_NODShiLtJ_G0001000.1 mouse_genomes_project 2 175645523 175647196 - TEC TEC MGP_NODShiLtJ_T0058297.1 MGP_NODShiLtJ_G0026565.1 mouse_genomes_project 2 175362890 175369813 - MGP_NODShiLtJ_P0058297 Eif6 protein_coding protein_coding MGP_NODShiLtJ_T0058298.1 MGP_NODShiLtJ_G0026565.1 mouse_genomes_project 2 175362895 175365533 - Eif6 protein_coding processed_transcript MGP_NODShiLtJ_T0058299.1 MGP_NODShiLtJ_G0026565.1 mouse_genomes_project 2 175363091 175369324 - MGP_NODShiLtJ_P0058299 Eif6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058300.1 MGP_NODShiLtJ_G0026565.1 mouse_genomes_project 2 175365889 175369324 - Eif6 protein_coding retained_intron MGP_NODShiLtJ_T0058301.1 MGP_NODShiLtJ_G0026565.1 mouse_genomes_project 2 175365889 175369324 - MGP_NODShiLtJ_P0058301 Eif6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058302.1 MGP_NODShiLtJ_G0026565.1 mouse_genomes_project 2 175366831 175369654 - MGP_NODShiLtJ_P0058302 Eif6 protein_coding protein_coding MGP_NODShiLtJ_T0058303.1 MGP_NODShiLtJ_G0026565.1 mouse_genomes_project 2 175368047 175369551 - MGP_NODShiLtJ_P0058303 Eif6 protein_coding protein_coding MGP_NODShiLtJ_T0100376.1 MGP_NODShiLtJ_G0038770.1 mouse_genomes_project 2 88608561 88608688 + Gm25420 snoRNA snoRNA MGP_NODShiLtJ_T0101788.1 MGP_NODShiLtJ_G0039956.1 mouse_genomes_project 2 36825914 36826853 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0055618.1 MGP_NODShiLtJ_G0025935.1 mouse_genomes_project 2 100330276 100338531 - MGP_NODShiLtJ_P0055618 Olfr1252 protein_coding protein_coding MGP_NODShiLtJ_T0056412.1 MGP_NODShiLtJ_G0026120.1 mouse_genomes_project 2 129478731 129616851 - MGP_NODShiLtJ_P0056412 Dph6 protein_coding protein_coding MGP_NODShiLtJ_T0056413.1 MGP_NODShiLtJ_G0026120.1 mouse_genomes_project 2 129478944 129616885 - MGP_NODShiLtJ_P0056413 Dph6 protein_coding protein_coding MGP_NODShiLtJ_T0056414.1 MGP_NODShiLtJ_G0026120.1 mouse_genomes_project 2 129480507 129507214 - Dph6 protein_coding processed_transcript MGP_NODShiLtJ_T0056415.1 MGP_NODShiLtJ_G0026120.1 mouse_genomes_project 2 129483560 129616960 - Dph6 protein_coding retained_intron MGP_NODShiLtJ_T0056416.1 MGP_NODShiLtJ_G0026120.1 mouse_genomes_project 2 129602184 129616903 - Dph6 protein_coding retained_intron MGP_NODShiLtJ_T0004075.1 MGP_NODShiLtJ_G0003599.1 mouse_genomes_project 2 171831792 171833240 - 1700030C14Rik antisense antisense MGP_NODShiLtJ_T0004020.1 MGP_NODShiLtJ_G0003560.1 mouse_genomes_project 2 141500455 141503093 + A530010F05Rik antisense antisense MGP_NODShiLtJ_T0010245.1 MGP_NODShiLtJ_G0008378.1 mouse_genomes_project 2 8310616 8310697 + Mir669d-2 miRNA miRNA MGP_NODShiLtJ_T0101783.1 MGP_NODShiLtJ_G0039951.1 mouse_genomes_project 2 9889359 9902511 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0055210.1 MGP_NODShiLtJ_G0025713.1 mouse_genomes_project 2 86951044 86953471 + Itga4 protein_coding processed_transcript MGP_NODShiLtJ_T0055211.1 MGP_NODShiLtJ_G0025713.1 mouse_genomes_project 2 86951118 87038443 + MGP_NODShiLtJ_P0055211 Itga4 protein_coding protein_coding MGP_NODShiLtJ_T0055212.1 MGP_NODShiLtJ_G0025713.1 mouse_genomes_project 2 86951190 86971753 + Itga4 protein_coding processed_transcript MGP_NODShiLtJ_T0055213.1 MGP_NODShiLtJ_G0025713.1 mouse_genomes_project 2 86951339 86995233 + Itga4 protein_coding processed_transcript MGP_NODShiLtJ_T0055214.1 MGP_NODShiLtJ_G0025713.1 mouse_genomes_project 2 86951565 86994937 + Itga4 protein_coding processed_transcript MGP_NODShiLtJ_T0057598.1 MGP_NODShiLtJ_G0026373.1 mouse_genomes_project 2 153192016 153200251 + MGP_NODShiLtJ_P0057598 Lamp5 protein_coding protein_coding MGP_NODShiLtJ_T0057599.1 MGP_NODShiLtJ_G0026373.1 mouse_genomes_project 2 153198646 153211615 + MGP_NODShiLtJ_P0057599 Lamp5 protein_coding protein_coding MGP_NODShiLtJ_T0057600.1 MGP_NODShiLtJ_G0026373.1 mouse_genomes_project 2 153198971 153202214 + Lamp5 protein_coding retained_intron MGP_NODShiLtJ_T0057601.1 MGP_NODShiLtJ_G0026373.1 mouse_genomes_project 2 153198971 153199933 + Lamp5 protein_coding processed_transcript MGP_NODShiLtJ_T0057602.1 MGP_NODShiLtJ_G0026373.1 mouse_genomes_project 2 153200150 153211603 + Lamp5 protein_coding processed_transcript MGP_NODShiLtJ_T0013556.1 MGP_NODShiLtJ_G0011664.1 mouse_genomes_project 2 105763694 105764295 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055939.1 MGP_NODShiLtJ_G0025995.1 mouse_genomes_project 2 103956697 103998438 + MGP_NODShiLtJ_P0055939 Syt13 protein_coding protein_coding MGP_NODShiLtJ_T0013412.1 MGP_NODShiLtJ_G0011520.1 mouse_genomes_project 2 54240204 54240383 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058810.1 MGP_NODShiLtJ_G0026666.1 mouse_genomes_project 2 184643152 184645590 - MGP_NODShiLtJ_P0058810 Slpi protein_coding protein_coding MGP_NODShiLtJ_T0058811.1 MGP_NODShiLtJ_G0026666.1 mouse_genomes_project 2 184643244 184645150 - MGP_NODShiLtJ_P0058811 Slpi protein_coding protein_coding MGP_NODShiLtJ_T0058812.1 MGP_NODShiLtJ_G0026666.1 mouse_genomes_project 2 184644677 184683161 - MGP_NODShiLtJ_P0058812 Slpi protein_coding protein_coding MGP_NODShiLtJ_T0007370.1 MGP_NODShiLtJ_G0006036.1 mouse_genomes_project 2 193139089 193147164 - Gm14641 lincRNA lincRNA MGP_NODShiLtJ_T0056349.1 MGP_NODShiLtJ_G0026100.1 mouse_genomes_project 2 127014380 127027397 + MGP_NODShiLtJ_P0056349 Lpcat4 protein_coding protein_coding MGP_NODShiLtJ_T0056350.1 MGP_NODShiLtJ_G0026100.1 mouse_genomes_project 2 127016400 127018979 + Lpcat4 protein_coding processed_transcript MGP_NODShiLtJ_T0056351.1 MGP_NODShiLtJ_G0026100.1 mouse_genomes_project 2 127016889 127017679 + Lpcat4 protein_coding processed_transcript MGP_NODShiLtJ_T0056352.1 MGP_NODShiLtJ_G0026100.1 mouse_genomes_project 2 127019503 127021895 + Lpcat4 protein_coding processed_transcript MGP_NODShiLtJ_T0011410.1 MGP_NODShiLtJ_G0009543.1 mouse_genomes_project 2 176469354 176469600 + Gm27651 misc_RNA misc_RNA MGP_NODShiLtJ_T0098014.1 MGP_NODShiLtJ_G0036426.1 mouse_genomes_project 2 137668567 137668681 - Gm23983 rRNA rRNA MGP_NODShiLtJ_T0056325.1 MGP_NODShiLtJ_G0026076.1 mouse_genomes_project 2 125838018 125838960 + MGP_NODShiLtJ_P0056325 protein_coding protein_coding MGP_NODShiLtJ_T0010314.1 MGP_NODShiLtJ_G0008447.1 mouse_genomes_project 2 71579856 71579961 - Mir6337 miRNA miRNA MGP_NODShiLtJ_T0013742.1 MGP_NODShiLtJ_G0011850.1 mouse_genomes_project 2 186420774 186421371 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017771.1 MGP_NODShiLtJ_G0015361.1 mouse_genomes_project 2 189615603 189617570 + Gm14261 processed_transcript processed_transcript MGP_NODShiLtJ_T0053710.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32178573 32261137 + MGP_NODShiLtJ_P0053710 Nup214 protein_coding protein_coding MGP_NODShiLtJ_T0053711.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32178623 32184125 + Nup214 protein_coding retained_intron MGP_NODShiLtJ_T0053712.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32183940 32195530 + Nup214 protein_coding processed_transcript MGP_NODShiLtJ_T0053713.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32198991 32202868 + Nup214 protein_coding processed_transcript MGP_NODShiLtJ_T0053714.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32202131 32208030 + MGP_NODShiLtJ_P0053714 Nup214 protein_coding protein_coding MGP_NODShiLtJ_T0053715.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32215772 32217146 + Nup214 protein_coding processed_transcript MGP_NODShiLtJ_T0053716.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32230776 32238192 + Nup214 protein_coding processed_transcript MGP_NODShiLtJ_T0053717.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32240445 32263810 + MGP_NODShiLtJ_P0053717 Nup214 protein_coding protein_coding MGP_NODShiLtJ_T0053718.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32250386 32261133 + MGP_NODShiLtJ_P0053718 Nup214 protein_coding protein_coding MGP_NODShiLtJ_T0053720.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32259760 32261620 + Nup214 protein_coding retained_intron MGP_NODShiLtJ_T0053721.1 MGP_NODShiLtJ_G0025432.1 mouse_genomes_project 2 32260457 32261131 + Nup214 protein_coding retained_intron MGP_NODShiLtJ_T0010341.1 MGP_NODShiLtJ_G0008474.1 mouse_genomes_project 2 127417536 127417673 + Gm44374 miRNA miRNA MGP_NODShiLtJ_T0055476.1 MGP_NODShiLtJ_G0025811.1 mouse_genomes_project 2 96103249 96104191 - MGP_NODShiLtJ_P0055476 Olfr1087 protein_coding protein_coding MGP_NODShiLtJ_T0057363.1 MGP_NODShiLtJ_G0026325.1 mouse_genomes_project 2 147139718 147140615 + MGP_NODShiLtJ_P0057363 Oxt protein_coding protein_coding MGP_NODShiLtJ_T0058539.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 176966956 176977432 + Rpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0058540.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 176966998 177014964 + MGP_NODShiLtJ_P0058540 Rpn2 protein_coding protein_coding MGP_NODShiLtJ_T0058541.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 176967085 177014964 + MGP_NODShiLtJ_P0058541 Rpn2 protein_coding protein_coding MGP_NODShiLtJ_T0058542.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 176967365 177014701 + Rpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0058543.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 176967508 176978582 + Rpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0058544.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 176969882 176978463 + Rpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0058545.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 176971453 177014380 + Rpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0058546.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 176982712 176983224 + Rpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0058547.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 177002437 177004095 + Rpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0058548.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 177004063 177011118 + Rpn2 protein_coding retained_intron MGP_NODShiLtJ_T0058549.1 MGP_NODShiLtJ_G0026599.1 mouse_genomes_project 2 177008429 177010807 + Rpn2 protein_coding retained_intron MGP_NODShiLtJ_T0010266.1 MGP_NODShiLtJ_G0008399.1 mouse_genomes_project 2 8364596 8364717 + Mir466l miRNA miRNA MGP_NODShiLtJ_T0055426.1 MGP_NODShiLtJ_G0025762.1 mouse_genomes_project 2 94321902 94322847 - MGP_NODShiLtJ_P0055426 Olfr994 protein_coding protein_coding MGP_NODShiLtJ_T0054676.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68141763 68201629 - MGP_NODShiLtJ_P0054676 Fap protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054677.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68141768 68221688 - MGP_NODShiLtJ_P0054677 Fap protein_coding protein_coding MGP_NODShiLtJ_T0054678.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68141938 68221593 - Fap protein_coding processed_transcript MGP_NODShiLtJ_T0054679.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68141948 68144226 - MGP_NODShiLtJ_P0054679 Fap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054680.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68142009 68221464 - MGP_NODShiLtJ_P0054680 Fap protein_coding protein_coding MGP_NODShiLtJ_T0054681.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68142009 68221464 - MGP_NODShiLtJ_P0054681 Fap protein_coding protein_coding MGP_NODShiLtJ_T0054682.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68142009 68221464 - MGP_NODShiLtJ_P0054682 Fap protein_coding protein_coding MGP_NODShiLtJ_T0054683.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68169148 68208759 - Fap protein_coding retained_intron MGP_NODShiLtJ_T0054684.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68177582 68221536 - Fap protein_coding retained_intron MGP_NODShiLtJ_T0054685.1 MGP_NODShiLtJ_G0025607.1 mouse_genomes_project 2 68193656 68221173 - MGP_NODShiLtJ_P0054685 Fap protein_coding protein_coding MGP_NODShiLtJ_T0058138.1 MGP_NODShiLtJ_G0026528.1 mouse_genomes_project 2 173537379 173543220 + MGP_NODShiLtJ_P0058138 Bpifa5 protein_coding protein_coding MGP_NODShiLtJ_T0003918.1 MGP_NODShiLtJ_G0003491.1 mouse_genomes_project 2 56276341 56278678 + antisense antisense MGP_NODShiLtJ_T0007151.1 MGP_NODShiLtJ_G0005856.1 mouse_genomes_project 2 59899877 59904224 - Gm26794 lincRNA lincRNA MGP_NODShiLtJ_T0013360.1 MGP_NODShiLtJ_G0011468.1 mouse_genomes_project 2 31019548 31019928 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013578.1 MGP_NODShiLtJ_G0011686.1 mouse_genomes_project 2 117026052 117026526 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059509.1 MGP_NODShiLtJ_G0026828.1 mouse_genomes_project 2 202753682 202755207 + MGP_NODShiLtJ_P0059509 Ppdpf protein_coding protein_coding MGP_NODShiLtJ_T0059510.1 MGP_NODShiLtJ_G0026828.1 mouse_genomes_project 2 202753731 202755177 + Ppdpf protein_coding retained_intron MGP_NODShiLtJ_T0059511.1 MGP_NODShiLtJ_G0026828.1 mouse_genomes_project 2 202753771 202754940 + MGP_NODShiLtJ_P0059511 Ppdpf protein_coding protein_coding MGP_NODShiLtJ_T0059512.1 MGP_NODShiLtJ_G0026828.1 mouse_genomes_project 2 202753782 202754940 + Ppdpf protein_coding retained_intron MGP_NODShiLtJ_T0059513.1 MGP_NODShiLtJ_G0026828.1 mouse_genomes_project 2 202753971 202754940 + Ppdpf protein_coding retained_intron MGP_NODShiLtJ_T0059514.1 MGP_NODShiLtJ_G0026828.1 mouse_genomes_project 2 202754349 202754940 + Ppdpf protein_coding retained_intron MGP_NODShiLtJ_T0057633.1 MGP_NODShiLtJ_G0026381.1 mouse_genomes_project 2 157088137 157260494 + MGP_NODShiLtJ_P0057633 Sptlc3 protein_coding protein_coding MGP_NODShiLtJ_T0057634.1 MGP_NODShiLtJ_G0026381.1 mouse_genomes_project 2 157088144 157261112 + MGP_NODShiLtJ_P0057634 Sptlc3 protein_coding protein_coding MGP_NODShiLtJ_T0013655.1 MGP_NODShiLtJ_G0011763.1 mouse_genomes_project 2 149435958 149436929 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100382.1 MGP_NODShiLtJ_G0038776.1 mouse_genomes_project 2 108933746 108933869 + Gm22957 snoRNA snoRNA MGP_NODShiLtJ_T0052449.1 MGP_NODShiLtJ_G0025214.1 mouse_genomes_project 2 17526330 17532201 + MGP_NODShiLtJ_P0052449 Bmi1 protein_coding protein_coding MGP_NODShiLtJ_T0052450.1 MGP_NODShiLtJ_G0025214.1 mouse_genomes_project 2 17528893 17532538 + MGP_NODShiLtJ_P0052450 Bmi1 protein_coding protein_coding MGP_NODShiLtJ_T0052451.1 MGP_NODShiLtJ_G0025214.1 mouse_genomes_project 2 17529503 17531540 + MGP_NODShiLtJ_P0052451 Bmi1 protein_coding protein_coding MGP_NODShiLtJ_T0052452.1 MGP_NODShiLtJ_G0025214.1 mouse_genomes_project 2 17529616 17531366 + MGP_NODShiLtJ_P0052452 Bmi1 protein_coding protein_coding MGP_NODShiLtJ_T0052453.1 MGP_NODShiLtJ_G0025214.1 mouse_genomes_project 2 17530302 17536854 + MGP_NODShiLtJ_P0052453 Bmi1 protein_coding protein_coding MGP_NODShiLtJ_T0053179.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 26957602 27021152 - MGP_NODShiLtJ_P0053179 Sardh protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053180.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 26957604 27005016 - Sardh protein_coding processed_transcript MGP_NODShiLtJ_T0053181.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 26957604 27021173 - MGP_NODShiLtJ_P0053181 Sardh protein_coding protein_coding MGP_NODShiLtJ_T0053182.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 26958408 26961473 - Sardh protein_coding retained_intron MGP_NODShiLtJ_T0053183.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 26958593 26979726 - Sardh protein_coding processed_transcript MGP_NODShiLtJ_T0053184.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 26965895 26988504 - Sardh protein_coding retained_intron MGP_NODShiLtJ_T0053185.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 26980838 26985437 - Sardh protein_coding processed_transcript MGP_NODShiLtJ_T0053186.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 26980874 26997523 - Sardh protein_coding retained_intron MGP_NODShiLtJ_T0053187.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 27013764 27020755 - MGP_NODShiLtJ_P0053187 Sardh protein_coding protein_coding MGP_NODShiLtJ_T0053188.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 27013782 27022244 - MGP_NODShiLtJ_P0053188 Sardh protein_coding protein_coding MGP_NODShiLtJ_T0053189.1 MGP_NODShiLtJ_G0025350.1 mouse_genomes_project 2 27016581 27021321 - MGP_NODShiLtJ_P0053189 Sardh protein_coding protein_coding MGP_NODShiLtJ_T0056031.1 MGP_NODShiLtJ_G0026011.1 mouse_genomes_project 2 107825631 109604506 + MGP_NODShiLtJ_P0056031 Lrrc4c protein_coding protein_coding MGP_NODShiLtJ_T0056032.1 MGP_NODShiLtJ_G0026011.1 mouse_genomes_project 2 107825678 109603823 + MGP_NODShiLtJ_P0056032 Lrrc4c protein_coding protein_coding MGP_NODShiLtJ_T0056033.1 MGP_NODShiLtJ_G0026011.1 mouse_genomes_project 2 109382464 109604504 + MGP_NODShiLtJ_P0056033 Lrrc4c protein_coding protein_coding MGP_NODShiLtJ_T0056034.1 MGP_NODShiLtJ_G0026011.1 mouse_genomes_project 2 109383444 109601903 + MGP_NODShiLtJ_P0056034 Lrrc4c protein_coding protein_coding MGP_NODShiLtJ_T0054222.1 MGP_NODShiLtJ_G0025532.1 mouse_genomes_project 2 38155416 38166621 - MGP_NODShiLtJ_P0054222 Zbtb26 protein_coding protein_coding MGP_NODShiLtJ_T0054223.1 MGP_NODShiLtJ_G0025532.1 mouse_genomes_project 2 38158447 38166620 - MGP_NODShiLtJ_P0054223 Zbtb26 protein_coding protein_coding MGP_NODShiLtJ_T0054224.1 MGP_NODShiLtJ_G0025532.1 mouse_genomes_project 2 38161978 38166635 - Zbtb26 protein_coding processed_transcript MGP_NODShiLtJ_T0013456.1 MGP_NODShiLtJ_G0011564.1 mouse_genomes_project 2 71017788 71018378 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055093.1 MGP_NODShiLtJ_G0025690.1 mouse_genomes_project 2 82011283 82032482 + MGP_NODShiLtJ_P0055093 Gm28230 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007136.1 MGP_NODShiLtJ_G0005843.1 mouse_genomes_project 2 48376932 48399848 + Gm13465 lincRNA lincRNA MGP_NODShiLtJ_T0058601.1 MGP_NODShiLtJ_G0026611.1 mouse_genomes_project 2 178020060 178052134 + MGP_NODShiLtJ_P0058601 Bpi protein_coding protein_coding MGP_NODShiLtJ_T0058602.1 MGP_NODShiLtJ_G0026611.1 mouse_genomes_project 2 178020060 178051998 + MGP_NODShiLtJ_P0058602 Bpi protein_coding protein_coding MGP_NODShiLtJ_T0058603.1 MGP_NODShiLtJ_G0026611.1 mouse_genomes_project 2 178020060 178052137 + MGP_NODShiLtJ_P0058603 Bpi protein_coding protein_coding MGP_NODShiLtJ_T0057369.1 MGP_NODShiLtJ_G0026329.1 mouse_genomes_project 2 147206922 147214096 - MGP_NODShiLtJ_P0057369 Lzts3 protein_coding protein_coding MGP_NODShiLtJ_T0057370.1 MGP_NODShiLtJ_G0026329.1 mouse_genomes_project 2 147206922 147214096 - MGP_NODShiLtJ_P0057370 Lzts3 protein_coding protein_coding MGP_NODShiLtJ_T0057371.1 MGP_NODShiLtJ_G0026329.1 mouse_genomes_project 2 147206925 147219175 - MGP_NODShiLtJ_P0057371 Lzts3 protein_coding protein_coding MGP_NODShiLtJ_T0053513.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30414239 30437021 + MGP_NODShiLtJ_P0053513 Fam73b protein_coding protein_coding MGP_NODShiLtJ_T0053514.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30414251 30418704 + Fam73b protein_coding processed_transcript MGP_NODShiLtJ_T0053515.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30414260 30430375 + MGP_NODShiLtJ_P0053515 Fam73b protein_coding protein_coding MGP_NODShiLtJ_T0053516.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30414272 30419311 + Fam73b protein_coding retained_intron MGP_NODShiLtJ_T0053517.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30414299 30420412 + MGP_NODShiLtJ_P0053517 Fam73b protein_coding protein_coding MGP_NODShiLtJ_T0053518.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30414302 30437019 + MGP_NODShiLtJ_P0053518 Fam73b protein_coding protein_coding MGP_NODShiLtJ_T0053519.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30417701 30419312 + Fam73b protein_coding retained_intron MGP_NODShiLtJ_T0053520.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30418421 30421209 + MGP_NODShiLtJ_P0053520 Fam73b protein_coding protein_coding MGP_NODShiLtJ_T0053521.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30421288 30427940 + Fam73b protein_coding retained_intron MGP_NODShiLtJ_T0053522.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30429515 30433507 + Fam73b protein_coding retained_intron MGP_NODShiLtJ_T0053523.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30433212 30435600 + MGP_NODShiLtJ_P0053523 Fam73b protein_coding protein_coding MGP_NODShiLtJ_T0053524.1 MGP_NODShiLtJ_G0025404.1 mouse_genomes_project 2 30433443 30435706 + MGP_NODShiLtJ_P0053524 Fam73b protein_coding protein_coding MGP_NODShiLtJ_T0013448.1 MGP_NODShiLtJ_G0011556.1 mouse_genomes_project 2 65928495 65929637 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004065.1 MGP_NODShiLtJ_G0003590.1 mouse_genomes_project 2 165702732 165866232 + antisense antisense MGP_NODShiLtJ_T0003846.1 MGP_NODShiLtJ_G0003435.1 mouse_genomes_project 2 11841474 11843393 + Gm37126 antisense antisense MGP_NODShiLtJ_T0013367.1 MGP_NODShiLtJ_G0011475.1 mouse_genomes_project 2 33981807 33982217 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007375.1 MGP_NODShiLtJ_G0006041.1 mouse_genomes_project 2 200860642 200862575 + 4930591A17Rik lincRNA lincRNA MGP_NODShiLtJ_T0055771.1 MGP_NODShiLtJ_G0025969.1 mouse_genomes_project 2 102065449 102071828 + MGP_NODShiLtJ_P0055771 Acp2 protein_coding protein_coding MGP_NODShiLtJ_T0055772.1 MGP_NODShiLtJ_G0025969.1 mouse_genomes_project 2 102065473 102077616 + MGP_NODShiLtJ_P0055772 Acp2 protein_coding protein_coding MGP_NODShiLtJ_T0055773.1 MGP_NODShiLtJ_G0025969.1 mouse_genomes_project 2 102065488 102075662 + Acp2 protein_coding retained_intron MGP_NODShiLtJ_T0055774.1 MGP_NODShiLtJ_G0025969.1 mouse_genomes_project 2 102065488 102068611 + MGP_NODShiLtJ_P0055774 Acp2 protein_coding protein_coding MGP_NODShiLtJ_T0055775.1 MGP_NODShiLtJ_G0025969.1 mouse_genomes_project 2 102065492 102066221 + Acp2 protein_coding processed_transcript MGP_NODShiLtJ_T0055776.1 MGP_NODShiLtJ_G0025969.1 mouse_genomes_project 2 102065556 102074260 + MGP_NODShiLtJ_P0055776 Acp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0057432.1 MGP_NODShiLtJ_G0026338.1 mouse_genomes_project 2 147759027 147778568 + MGP_NODShiLtJ_P0057432 Hspa12b protein_coding protein_coding MGP_NODShiLtJ_T0057433.1 MGP_NODShiLtJ_G0026338.1 mouse_genomes_project 2 147759189 147769832 + MGP_NODShiLtJ_P0057433 Hspa12b protein_coding protein_coding MGP_NODShiLtJ_T0057434.1 MGP_NODShiLtJ_G0026338.1 mouse_genomes_project 2 147759241 147777474 + MGP_NODShiLtJ_P0057434 Hspa12b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013482.1 MGP_NODShiLtJ_G0011590.1 mouse_genomes_project 2 80267914 80268429 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017650.1 MGP_NODShiLtJ_G0015305.1 mouse_genomes_project 2 96748701 96754480 - Gm13734 processed_transcript processed_transcript MGP_NODShiLtJ_T0057891.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169894372 169974283 - MGP_NODShiLtJ_P0057891 Ninl protein_coding protein_coding MGP_NODShiLtJ_T0057892.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169898625 169901242 - Ninl protein_coding processed_transcript MGP_NODShiLtJ_T0057893.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169899128 169913008 - MGP_NODShiLtJ_P0057893 Ninl protein_coding protein_coding MGP_NODShiLtJ_T0057894.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169912706 169914146 - Ninl protein_coding retained_intron MGP_NODShiLtJ_T0057895.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169918729 169931961 - MGP_NODShiLtJ_P0057895 Ninl protein_coding protein_coding MGP_NODShiLtJ_T0057896.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169924283 169932095 - Ninl protein_coding processed_transcript MGP_NODShiLtJ_T0057897.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169924375 169974217 - Ninl protein_coding processed_transcript MGP_NODShiLtJ_T0057898.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169927108 169974261 - Ninl protein_coding processed_transcript MGP_NODShiLtJ_T0057899.1 MGP_NODShiLtJ_G0026454.1 mouse_genomes_project 2 169935002 170013084 - MGP_NODShiLtJ_P0057899 Ninl protein_coding protein_coding MGP_NODShiLtJ_T0055177.1 MGP_NODShiLtJ_G0025709.1 mouse_genomes_project 2 84665994 84725977 - MGP_NODShiLtJ_P0055177 Sestd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055178.1 MGP_NODShiLtJ_G0025709.1 mouse_genomes_project 2 84680939 84683482 - Sestd1 protein_coding processed_transcript MGP_NODShiLtJ_T0055179.1 MGP_NODShiLtJ_G0025709.1 mouse_genomes_project 2 84680941 84762914 - Sestd1 protein_coding processed_transcript MGP_NODShiLtJ_T0013334.1 MGP_NODShiLtJ_G0011442.1 mouse_genomes_project 2 18581787 18581892 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054090.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35559749 35588479 + MGP_NODShiLtJ_P0054090 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054091.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35559749 35635941 + MGP_NODShiLtJ_P0054091 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054092.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35559749 35636653 + MGP_NODShiLtJ_P0054092 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054093.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35559876 35636253 + MGP_NODShiLtJ_P0054093 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054094.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35583739 35605395 + MGP_NODShiLtJ_P0054094 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054095.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35589985 35636653 + MGP_NODShiLtJ_P0054095 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054096.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35589985 35618360 + MGP_NODShiLtJ_P0054096 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054097.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35590009 35605395 + MGP_NODShiLtJ_P0054097 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054098.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35590009 35595437 + MGP_NODShiLtJ_P0054098 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054099.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35602819 35605395 + MGP_NODShiLtJ_P0054099 Cntrl protein_coding protein_coding MGP_NODShiLtJ_T0054100.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35618031 35623531 + MGP_NODShiLtJ_P0054100 Cntrl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054101.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35619454 35623959 + Cntrl protein_coding retained_intron MGP_NODShiLtJ_T0054102.1 MGP_NODShiLtJ_G0025487.1 mouse_genomes_project 2 35633078 35636642 + Cntrl protein_coding retained_intron MGP_NODShiLtJ_T0055971.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104748381 104922985 - MGP_NODShiLtJ_P0055971 Ext2 protein_coding protein_coding MGP_NODShiLtJ_T0055972.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104784745 104923004 - MGP_NODShiLtJ_P0055972 Ext2 protein_coding protein_coding MGP_NODShiLtJ_T0055973.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104785227 104794220 - Ext2 protein_coding retained_intron MGP_NODShiLtJ_T0055974.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104785241 104922981 - MGP_NODShiLtJ_P0055974 Ext2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055975.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104792065 104797733 - MGP_NODShiLtJ_P0055975 Ext2 protein_coding protein_coding MGP_NODShiLtJ_T0055976.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104792648 104793619 - MGP_NODShiLtJ_P0055976 Ext2 protein_coding protein_coding MGP_NODShiLtJ_T0055977.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104806389 104922985 - Ext2 protein_coding processed_transcript MGP_NODShiLtJ_T0055978.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104859292 104895908 - Ext2 protein_coding retained_intron MGP_NODShiLtJ_T0055979.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104906057 104923001 - MGP_NODShiLtJ_P0055979 Ext2 protein_coding protein_coding MGP_NODShiLtJ_T0055980.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104913061 104922981 - Ext2 protein_coding retained_intron MGP_NODShiLtJ_T0055981.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104913486 104922984 - MGP_NODShiLtJ_P0055981 Ext2 protein_coding protein_coding MGP_NODShiLtJ_T0055982.1 MGP_NODShiLtJ_G0026002.1 mouse_genomes_project 2 104913871 104922989 - Ext2 protein_coding processed_transcript MGP_NODShiLtJ_T0055191.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85428197 85501145 - MGP_NODShiLtJ_P0055191 Cwc22 protein_coding protein_coding MGP_NODShiLtJ_T0055192.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85446663 85501340 - MGP_NODShiLtJ_P0055192 Cwc22 protein_coding protein_coding MGP_NODShiLtJ_T0055193.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85446663 85501318 - MGP_NODShiLtJ_P0055193 Cwc22 protein_coding protein_coding MGP_NODShiLtJ_T0055194.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85446776 85501148 - MGP_NODShiLtJ_P0055194 Cwc22 protein_coding protein_coding MGP_NODShiLtJ_T0055195.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85446778 85501318 - MGP_NODShiLtJ_P0055195 Cwc22 protein_coding protein_coding MGP_NODShiLtJ_T0055196.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85458983 85460882 - Cwc22 protein_coding processed_transcript MGP_NODShiLtJ_T0055197.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85470590 85501164 - Cwc22 protein_coding processed_transcript MGP_NODShiLtJ_T0055198.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85480203 85501148 - Cwc22 protein_coding processed_transcript MGP_NODShiLtJ_T0055199.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85483456 85500903 - MGP_NODShiLtJ_P0055199 Cwc22 protein_coding protein_coding MGP_NODShiLtJ_T0055200.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85483542 85501154 - MGP_NODShiLtJ_P0055200 Cwc22 protein_coding protein_coding MGP_NODShiLtJ_T0055201.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85483598 85490830 - Cwc22 protein_coding processed_transcript MGP_NODShiLtJ_T0055202.1 MGP_NODShiLtJ_G0025711.1 mouse_genomes_project 2 85484944 85490888 - Cwc22 protein_coding processed_transcript MGP_NODShiLtJ_T0013303.1 MGP_NODShiLtJ_G0011411.1 mouse_genomes_project 2 8761799 8762610 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054170.1 MGP_NODShiLtJ_G0025500.1 mouse_genomes_project 2 36653781 36710722 + MGP_NODShiLtJ_P0054170 Mrrf protein_coding protein_coding MGP_NODShiLtJ_T0054171.1 MGP_NODShiLtJ_G0025500.1 mouse_genomes_project 2 36653790 36656209 + Mrrf protein_coding retained_intron MGP_NODShiLtJ_T0054172.1 MGP_NODShiLtJ_G0025500.1 mouse_genomes_project 2 36654026 36665058 + MGP_NODShiLtJ_P0054172 Mrrf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054173.1 MGP_NODShiLtJ_G0025500.1 mouse_genomes_project 2 36664241 36676565 + Mrrf protein_coding processed_transcript MGP_NODShiLtJ_T0013336.1 MGP_NODShiLtJ_G0011444.1 mouse_genomes_project 2 18609009 18610366 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055623.1 MGP_NODShiLtJ_G0025938.1 mouse_genomes_project 2 100484340 100485246 - MGP_NODShiLtJ_P0055623 Olfr48 protein_coding protein_coding MGP_NODShiLtJ_T0013378.1 MGP_NODShiLtJ_G0011486.1 mouse_genomes_project 2 37879698 37880721 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013623.1 MGP_NODShiLtJ_G0011731.1 mouse_genomes_project 2 136753303 136754071 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059273.1 MGP_NODShiLtJ_G0026775.1 mouse_genomes_project 2 194826745 194833074 + MGP_NODShiLtJ_P0059273 1700021F07Rik protein_coding protein_coding MGP_NODShiLtJ_T0057747.1 MGP_NODShiLtJ_G0026410.1 mouse_genomes_project 2 163548161 164037724 + MGP_NODShiLtJ_P0057747 Slc24a3 protein_coding protein_coding MGP_NODShiLtJ_T0057748.1 MGP_NODShiLtJ_G0026410.1 mouse_genomes_project 2 163548326 163911421 + Slc24a3 protein_coding processed_transcript MGP_NODShiLtJ_T0057749.1 MGP_NODShiLtJ_G0026410.1 mouse_genomes_project 2 163624852 164037724 + Slc24a3 protein_coding processed_transcript MGP_NODShiLtJ_T0057750.1 MGP_NODShiLtJ_G0026410.1 mouse_genomes_project 2 163627213 164035919 + MGP_NODShiLtJ_P0057750 Slc24a3 protein_coding protein_coding MGP_NODShiLtJ_T0057751.1 MGP_NODShiLtJ_G0026410.1 mouse_genomes_project 2 164001212 164008551 + Slc24a3 protein_coding processed_transcript MGP_NODShiLtJ_T0054660.1 MGP_NODShiLtJ_G0025604.1 mouse_genomes_project 2 67567433 67939893 + MGP_NODShiLtJ_P0054660 Slc4a10 protein_coding protein_coding MGP_NODShiLtJ_T0054661.1 MGP_NODShiLtJ_G0025604.1 mouse_genomes_project 2 67567556 67937986 + Slc4a10 protein_coding processed_transcript MGP_NODShiLtJ_T0054662.1 MGP_NODShiLtJ_G0025604.1 mouse_genomes_project 2 67567556 67939893 + MGP_NODShiLtJ_P0054662 Slc4a10 protein_coding protein_coding MGP_NODShiLtJ_T0054663.1 MGP_NODShiLtJ_G0025604.1 mouse_genomes_project 2 67567616 67939893 + MGP_NODShiLtJ_P0054663 Slc4a10 protein_coding protein_coding MGP_NODShiLtJ_T0054664.1 MGP_NODShiLtJ_G0025604.1 mouse_genomes_project 2 67676606 67692223 + Slc4a10 protein_coding processed_transcript MGP_NODShiLtJ_T0054665.1 MGP_NODShiLtJ_G0025604.1 mouse_genomes_project 2 67859007 67860743 + Slc4a10 protein_coding processed_transcript MGP_NODShiLtJ_T0054666.1 MGP_NODShiLtJ_G0025604.1 mouse_genomes_project 2 67928640 67938540 + Slc4a10 protein_coding processed_transcript MGP_NODShiLtJ_T0057183.1 MGP_NODShiLtJ_G0026278.1 mouse_genomes_project 2 143858868 143928404 - MGP_NODShiLtJ_P0057183 Kcnip3 protein_coding protein_coding MGP_NODShiLtJ_T0057184.1 MGP_NODShiLtJ_G0026278.1 mouse_genomes_project 2 143858868 143928404 - MGP_NODShiLtJ_P0057184 Kcnip3 protein_coding protein_coding MGP_NODShiLtJ_T0057185.1 MGP_NODShiLtJ_G0026278.1 mouse_genomes_project 2 143860498 143888399 - MGP_NODShiLtJ_P0057185 Kcnip3 protein_coding protein_coding MGP_NODShiLtJ_T0057186.1 MGP_NODShiLtJ_G0026278.1 mouse_genomes_project 2 143860600 143929128 - Kcnip3 protein_coding processed_transcript MGP_NODShiLtJ_T0100381.1 MGP_NODShiLtJ_G0038775.1 mouse_genomes_project 2 105974464 105974596 - Gm26396 snoRNA snoRNA MGP_NODShiLtJ_T0054434.1 MGP_NODShiLtJ_G0025564.1 mouse_genomes_project 2 55457264 55458162 + MGP_NODShiLtJ_P0054434 Tas2r134 protein_coding protein_coding MGP_NODShiLtJ_T0058874.1 MGP_NODShiLtJ_G0026690.1 mouse_genomes_project 2 185131836 185134417 - MGP_NODShiLtJ_P0058874 Tnnc2 protein_coding protein_coding MGP_NODShiLtJ_T0058875.1 MGP_NODShiLtJ_G0026690.1 mouse_genomes_project 2 185132619 185134643 - Tnnc2 protein_coding processed_transcript MGP_NODShiLtJ_T0057831.1 MGP_NODShiLtJ_G0026432.1 mouse_genomes_project 2 167418609 167422676 + MGP_NODShiLtJ_P0057831 Cst12 protein_coding protein_coding MGP_NODShiLtJ_T0057832.1 MGP_NODShiLtJ_G0026432.1 mouse_genomes_project 2 167418620 167422795 + MGP_NODShiLtJ_P0057832 Cst12 protein_coding protein_coding MGP_NODShiLtJ_T0056043.1 MGP_NODShiLtJ_G0026013.1 mouse_genomes_project 2 114668466 114677033 + MGP_NODShiLtJ_P0056043 Rag2 protein_coding protein_coding MGP_NODShiLtJ_T0056044.1 MGP_NODShiLtJ_G0026013.1 mouse_genomes_project 2 114668494 114675557 + MGP_NODShiLtJ_P0056044 Rag2 protein_coding protein_coding MGP_NODShiLtJ_T0056882.1 MGP_NODShiLtJ_G0026205.1 mouse_genomes_project 2 137071024 137088279 - MGP_NODShiLtJ_P0056882 Strc protein_coding protein_coding MGP_NODShiLtJ_T0056883.1 MGP_NODShiLtJ_G0026205.1 mouse_genomes_project 2 137075711 137082354 - MGP_NODShiLtJ_P0056883 Strc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056884.1 MGP_NODShiLtJ_G0026205.1 mouse_genomes_project 2 137080213 137082338 - Strc protein_coding processed_transcript MGP_NODShiLtJ_T0056885.1 MGP_NODShiLtJ_G0026205.1 mouse_genomes_project 2 137080292 137082117 - Strc protein_coding retained_intron MGP_NODShiLtJ_T0056886.1 MGP_NODShiLtJ_G0026205.1 mouse_genomes_project 2 137083670 137094270 - Strc protein_coding retained_intron MGP_NODShiLtJ_T0057045.1 MGP_NODShiLtJ_G0026245.1 mouse_genomes_project 2 141526554 141737056 - MGP_NODShiLtJ_P0057045 Fbn1 protein_coding protein_coding MGP_NODShiLtJ_T0057046.1 MGP_NODShiLtJ_G0026245.1 mouse_genomes_project 2 141526587 141738666 - MGP_NODShiLtJ_P0057046 Fbn1 protein_coding protein_coding MGP_NODShiLtJ_T0057047.1 MGP_NODShiLtJ_G0026245.1 mouse_genomes_project 2 141617680 141736743 - Fbn1 protein_coding retained_intron MGP_NODShiLtJ_T0057377.1 MGP_NODShiLtJ_G0026331.1 mouse_genomes_project 2 147245960 147261280 + MGP_NODShiLtJ_P0057377 Itpa protein_coding protein_coding MGP_NODShiLtJ_T0057378.1 MGP_NODShiLtJ_G0026331.1 mouse_genomes_project 2 147246155 147255681 + Itpa protein_coding retained_intron MGP_NODShiLtJ_T0057379.1 MGP_NODShiLtJ_G0026331.1 mouse_genomes_project 2 147246158 147255388 + Itpa protein_coding processed_transcript MGP_NODShiLtJ_T0057380.1 MGP_NODShiLtJ_G0026331.1 mouse_genomes_project 2 147246176 147250446 + Itpa protein_coding retained_intron MGP_NODShiLtJ_T0057381.1 MGP_NODShiLtJ_G0026331.1 mouse_genomes_project 2 147246215 147260698 + Itpa protein_coding processed_transcript MGP_NODShiLtJ_T0057240.1 MGP_NODShiLtJ_G0026292.1 mouse_genomes_project 2 145149265 145259812 + MGP_NODShiLtJ_P0057240 Mertk protein_coding protein_coding MGP_NODShiLtJ_T0057241.1 MGP_NODShiLtJ_G0026292.1 mouse_genomes_project 2 145225526 145259599 + Mertk protein_coding processed_transcript MGP_NODShiLtJ_T0053449.1 MGP_NODShiLtJ_G0025393.1 mouse_genomes_project 2 30173606 30194555 + MGP_NODShiLtJ_P0053449 Tbc1d13 protein_coding protein_coding MGP_NODShiLtJ_T0053450.1 MGP_NODShiLtJ_G0025393.1 mouse_genomes_project 2 30173606 30177158 + MGP_NODShiLtJ_P0053450 Tbc1d13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053451.1 MGP_NODShiLtJ_G0025393.1 mouse_genomes_project 2 30173632 30175014 + Tbc1d13 protein_coding retained_intron MGP_NODShiLtJ_T0053452.1 MGP_NODShiLtJ_G0025393.1 mouse_genomes_project 2 30173651 30177041 + Tbc1d13 protein_coding processed_transcript MGP_NODShiLtJ_T0053453.1 MGP_NODShiLtJ_G0025393.1 mouse_genomes_project 2 30173666 30176538 + MGP_NODShiLtJ_P0053453 Tbc1d13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053454.1 MGP_NODShiLtJ_G0025393.1 mouse_genomes_project 2 30173681 30177375 + Tbc1d13 protein_coding processed_transcript MGP_NODShiLtJ_T0053455.1 MGP_NODShiLtJ_G0025393.1 mouse_genomes_project 2 30176891 30184403 + Tbc1d13 protein_coding processed_transcript MGP_NODShiLtJ_T0053456.1 MGP_NODShiLtJ_G0025393.1 mouse_genomes_project 2 30184157 30188957 + Tbc1d13 protein_coding retained_intron MGP_NODShiLtJ_T0055472.1 MGP_NODShiLtJ_G0025807.1 mouse_genomes_project 2 95936111 95940275 - MGP_NODShiLtJ_P0055472 Olfr1082 protein_coding protein_coding MGP_NODShiLtJ_T0055273.1 MGP_NODShiLtJ_G0025726.1 mouse_genomes_project 2 90268365 90571912 + MGP_NODShiLtJ_P0055273 Zfp804a protein_coding protein_coding MGP_NODShiLtJ_T0058132.1 MGP_NODShiLtJ_G0026526.1 mouse_genomes_project 2 173503278 173511226 + MGP_NODShiLtJ_P0058132 Bpifa3 protein_coding protein_coding MGP_NODShiLtJ_T0058133.1 MGP_NODShiLtJ_G0026526.1 mouse_genomes_project 2 173503278 173511226 + MGP_NODShiLtJ_P0058133 Bpifa3 protein_coding protein_coding MGP_NODShiLtJ_T0058134.1 MGP_NODShiLtJ_G0026526.1 mouse_genomes_project 2 173508418 173510489 + MGP_NODShiLtJ_P0058134 Bpifa3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056489.1 MGP_NODShiLtJ_G0026136.1 mouse_genomes_project 2 134206376 134228633 - MGP_NODShiLtJ_P0056489 Plcb2 protein_coding protein_coding MGP_NODShiLtJ_T0056490.1 MGP_NODShiLtJ_G0026136.1 mouse_genomes_project 2 134206855 134228554 - MGP_NODShiLtJ_P0056490 Plcb2 protein_coding protein_coding MGP_NODShiLtJ_T0056491.1 MGP_NODShiLtJ_G0026136.1 mouse_genomes_project 2 134207039 134210230 - Plcb2 protein_coding retained_intron MGP_NODShiLtJ_T0056492.1 MGP_NODShiLtJ_G0026136.1 mouse_genomes_project 2 134207558 134208601 - Plcb2 protein_coding retained_intron MGP_NODShiLtJ_T0056493.1 MGP_NODShiLtJ_G0026136.1 mouse_genomes_project 2 134209676 134212969 - Plcb2 protein_coding retained_intron MGP_NODShiLtJ_T0056494.1 MGP_NODShiLtJ_G0026136.1 mouse_genomes_project 2 134213097 134228586 - Plcb2 protein_coding retained_intron MGP_NODShiLtJ_T0053596.1 MGP_NODShiLtJ_G0025414.1 mouse_genomes_project 2 30975325 30989148 - MGP_NODShiLtJ_P0053596 Ptges protein_coding protein_coding MGP_NODShiLtJ_T0053597.1 MGP_NODShiLtJ_G0025414.1 mouse_genomes_project 2 30978136 30987640 - Ptges protein_coding processed_transcript MGP_NODShiLtJ_T0053598.1 MGP_NODShiLtJ_G0025414.1 mouse_genomes_project 2 30978150 31025434 - Ptges protein_coding processed_transcript MGP_NODShiLtJ_T0053599.1 MGP_NODShiLtJ_G0025414.1 mouse_genomes_project 2 30978342 30983321 - Ptges protein_coding processed_transcript MGP_NODShiLtJ_T0059234.1 MGP_NODShiLtJ_G0026764.1 mouse_genomes_project 2 193637942 193647099 - MGP_NODShiLtJ_P0059234 Gcnt7 protein_coding protein_coding MGP_NODShiLtJ_T0059235.1 MGP_NODShiLtJ_G0026764.1 mouse_genomes_project 2 193637943 193642372 - MGP_NODShiLtJ_P0059235 Gcnt7 protein_coding protein_coding MGP_NODShiLtJ_T0010367.1 MGP_NODShiLtJ_G0008500.1 mouse_genomes_project 2 175152970 175153049 + Mir499 miRNA miRNA MGP_NODShiLtJ_T0098299.1 MGP_NODShiLtJ_G0036705.1 mouse_genomes_project 2 1207836 1211965 + Gm37107 sense_intronic sense_intronic MGP_NODShiLtJ_T0053261.1 MGP_NODShiLtJ_G0025366.1 mouse_genomes_project 2 28523901 28536423 - MGP_NODShiLtJ_P0053261 Gfi1b protein_coding protein_coding MGP_NODShiLtJ_T0053262.1 MGP_NODShiLtJ_G0025366.1 mouse_genomes_project 2 28523906 28536386 - MGP_NODShiLtJ_P0053262 Gfi1b protein_coding protein_coding MGP_NODShiLtJ_T0053263.1 MGP_NODShiLtJ_G0025366.1 mouse_genomes_project 2 28529229 28529851 - Gfi1b protein_coding processed_transcript MGP_NODShiLtJ_T0053264.1 MGP_NODShiLtJ_G0025366.1 mouse_genomes_project 2 28529236 28536423 - Gfi1b protein_coding processed_transcript MGP_NODShiLtJ_T0055228.1 MGP_NODShiLtJ_G0025716.1 mouse_genomes_project 2 87380167 87424892 + MGP_NODShiLtJ_P0055228 Ssfa2 protein_coding protein_coding MGP_NODShiLtJ_T0055229.1 MGP_NODShiLtJ_G0025716.1 mouse_genomes_project 2 87380241 87424892 + MGP_NODShiLtJ_P0055229 Ssfa2 protein_coding protein_coding MGP_NODShiLtJ_T0055230.1 MGP_NODShiLtJ_G0025716.1 mouse_genomes_project 2 87380270 87424892 + MGP_NODShiLtJ_P0055230 Ssfa2 protein_coding protein_coding MGP_NODShiLtJ_T0055231.1 MGP_NODShiLtJ_G0025716.1 mouse_genomes_project 2 87380276 87381261 + Ssfa2 protein_coding processed_transcript MGP_NODShiLtJ_T0055232.1 MGP_NODShiLtJ_G0025716.1 mouse_genomes_project 2 87384000 87424892 + Ssfa2 protein_coding processed_transcript MGP_NODShiLtJ_T0057251.1 MGP_NODShiLtJ_G0026296.1 mouse_genomes_project 2 145437023 145438160 - MGP_NODShiLtJ_P0057251 Gm10762 protein_coding protein_coding MGP_NODShiLtJ_T0001053.1 MGP_NODShiLtJ_G0000979.1 mouse_genomes_project 2 39725093 39728478 + TEC TEC MGP_NODShiLtJ_T0001033.1 MGP_NODShiLtJ_G0000959.1 mouse_genomes_project 2 22834956 22836474 + TEC TEC MGP_NODShiLtJ_T0013599.1 MGP_NODShiLtJ_G0011707.1 mouse_genomes_project 2 123929715 123930252 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001020.1 MGP_NODShiLtJ_G0000946.1 mouse_genomes_project 2 12207278 12211242 - TEC TEC MGP_NODShiLtJ_T0007258.1 MGP_NODShiLtJ_G0005942.1 mouse_genomes_project 2 136191609 136201553 + Gm26899 lincRNA lincRNA MGP_NODShiLtJ_T0101846.1 MGP_NODShiLtJ_G0040014.1 mouse_genomes_project 2 172445320 172445988 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013295.1 MGP_NODShiLtJ_G0011403.1 mouse_genomes_project 2 2276181 2277007 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059047.1 MGP_NODShiLtJ_G0026721.1 mouse_genomes_project 2 187410286 187512603 + MGP_NODShiLtJ_P0059047 Arfgef2 protein_coding protein_coding MGP_NODShiLtJ_T0059048.1 MGP_NODShiLtJ_G0026721.1 mouse_genomes_project 2 187433738 187459034 + MGP_NODShiLtJ_P0059048 Arfgef2 protein_coding protein_coding MGP_NODShiLtJ_T0056356.1 MGP_NODShiLtJ_G0026104.1 mouse_genomes_project 2 127047214 127200820 + MGP_NODShiLtJ_P0056356 Gm21985 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058395.1 MGP_NODShiLtJ_G0026577.1 mouse_genomes_project 2 175652855 175675092 - MGP_NODShiLtJ_P0058395 Rbm12 protein_coding protein_coding MGP_NODShiLtJ_T0058396.1 MGP_NODShiLtJ_G0026577.1 mouse_genomes_project 2 175652855 175675092 - MGP_NODShiLtJ_P0058396 Rbm12 protein_coding protein_coding MGP_NODShiLtJ_T0058397.1 MGP_NODShiLtJ_G0026577.1 mouse_genomes_project 2 175658412 175675052 - MGP_NODShiLtJ_P0058397 Rbm12 protein_coding protein_coding MGP_NODShiLtJ_T0058398.1 MGP_NODShiLtJ_G0026577.1 mouse_genomes_project 2 175658848 175675114 - MGP_NODShiLtJ_P0058398 Rbm12 protein_coding protein_coding MGP_NODShiLtJ_T0058399.1 MGP_NODShiLtJ_G0026577.1 mouse_genomes_project 2 175658877 175675097 - MGP_NODShiLtJ_P0058399 Rbm12 protein_coding protein_coding MGP_NODShiLtJ_T0055079.1 MGP_NODShiLtJ_G0025681.1 mouse_genomes_project 2 81934014 81941150 - MGP_NODShiLtJ_P0055079 Evx2 protein_coding protein_coding MGP_NODShiLtJ_T0055080.1 MGP_NODShiLtJ_G0025681.1 mouse_genomes_project 2 81937239 81941012 - MGP_NODShiLtJ_P0055080 Evx2 protein_coding protein_coding MGP_NODShiLtJ_T0058781.1 MGP_NODShiLtJ_G0026653.1 mouse_genomes_project 2 184245382 184269583 + MGP_NODShiLtJ_P0058781 Ywhab protein_coding protein_coding MGP_NODShiLtJ_T0058782.1 MGP_NODShiLtJ_G0026653.1 mouse_genomes_project 2 184245925 184266283 + MGP_NODShiLtJ_P0058782 Ywhab protein_coding protein_coding MGP_NODShiLtJ_T0057994.1 MGP_NODShiLtJ_G0026486.1 mouse_genomes_project 2 171739253 171739454 + MGP_NODShiLtJ_P0057994 Gm17416 protein_coding protein_coding MGP_NODShiLtJ_T0057275.1 MGP_NODShiLtJ_G0026303.1 mouse_genomes_project 2 145754915 145784392 - MGP_NODShiLtJ_P0057275 Ckap2l protein_coding protein_coding MGP_NODShiLtJ_T0057276.1 MGP_NODShiLtJ_G0026303.1 mouse_genomes_project 2 145755746 145784370 - MGP_NODShiLtJ_P0057276 Ckap2l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0007147.1 MGP_NODShiLtJ_G0005853.1 mouse_genomes_project 2 55490791 55574604 - Gm13490 lincRNA lincRNA MGP_NODShiLtJ_T0007298.1 MGP_NODShiLtJ_G0005975.1 mouse_genomes_project 2 169672447 169673085 - Gm28450 lincRNA lincRNA MGP_NODShiLtJ_T0100346.1 MGP_NODShiLtJ_G0038740.1 mouse_genomes_project 2 26386906 26387045 - Snhg7 snoRNA snoRNA MGP_NODShiLtJ_T0013577.1 MGP_NODShiLtJ_G0011685.1 mouse_genomes_project 2 117016167 117016899 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010375.1 MGP_NODShiLtJ_G0008508.1 mouse_genomes_project 2 183253404 183253470 + Mir7003 miRNA miRNA MGP_NODShiLtJ_T0007313.1 MGP_NODShiLtJ_G0005988.1 mouse_genomes_project 2 176438857 176445629 - Gm14230 lincRNA lincRNA MGP_NODShiLtJ_T0007314.1 MGP_NODShiLtJ_G0005988.1 mouse_genomes_project 2 176443630 176445701 - Gm14230 lincRNA lincRNA MGP_NODShiLtJ_T0007315.1 MGP_NODShiLtJ_G0005988.1 mouse_genomes_project 2 176444280 176445609 - Gm14230 lincRNA lincRNA MGP_NODShiLtJ_T0101831.1 MGP_NODShiLtJ_G0039999.1 mouse_genomes_project 2 100784533 100785463 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0055369.1 MGP_NODShiLtJ_G0025745.1 mouse_genomes_project 2 93574758 93586312 - MGP_NODShiLtJ_P0055369 Serping1 protein_coding protein_coding MGP_NODShiLtJ_T0055370.1 MGP_NODShiLtJ_G0025745.1 mouse_genomes_project 2 93574877 93586353 - MGP_NODShiLtJ_P0055370 Serping1 protein_coding protein_coding MGP_NODShiLtJ_T0055371.1 MGP_NODShiLtJ_G0025745.1 mouse_genomes_project 2 93583090 93585088 - Serping1 protein_coding processed_transcript MGP_NODShiLtJ_T0013331.1 MGP_NODShiLtJ_G0011439.1 mouse_genomes_project 2 17616855 17618843 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013741.1 MGP_NODShiLtJ_G0011849.1 mouse_genomes_project 2 186129525 186129886 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101102.1 MGP_NODShiLtJ_G0039450.1 mouse_genomes_project 2 126730907 126732032 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0053963.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33273889 33381505 - MGP_NODShiLtJ_P0053963 Garnl3 protein_coding protein_coding MGP_NODShiLtJ_T0053964.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33274039 33380630 - MGP_NODShiLtJ_P0053964 Garnl3 protein_coding protein_coding MGP_NODShiLtJ_T0053965.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33274321 33432249 - MGP_NODShiLtJ_P0053965 Garnl3 protein_coding protein_coding MGP_NODShiLtJ_T0053966.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33294518 33298215 - Garnl3 protein_coding retained_intron MGP_NODShiLtJ_T0053967.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33298814 33404046 - Garnl3 protein_coding processed_transcript MGP_NODShiLtJ_T0053968.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33305000 33324530 - MGP_NODShiLtJ_P0053968 Garnl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053969.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33309091 33316949 - Garnl3 protein_coding retained_intron MGP_NODShiLtJ_T0053970.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33338652 33381052 - Garnl3 protein_coding processed_transcript MGP_NODShiLtJ_T0053971.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33346217 33380819 - Garnl3 protein_coding processed_transcript MGP_NODShiLtJ_T0053972.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33346222 33433384 - MGP_NODShiLtJ_P0053972 Garnl3 protein_coding protein_coding MGP_NODShiLtJ_T0053973.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33346224 33433388 - MGP_NODShiLtJ_P0053973 Garnl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053974.1 MGP_NODShiLtJ_G0025468.1 mouse_genomes_project 2 33346269 33432342 - MGP_NODShiLtJ_P0053974 Garnl3 protein_coding protein_coding MGP_NODShiLtJ_T0057258.1 MGP_NODShiLtJ_G0026300.1 mouse_genomes_project 2 145581283 145610811 + MGP_NODShiLtJ_P0057258 Polr1b protein_coding protein_coding MGP_NODShiLtJ_T0057259.1 MGP_NODShiLtJ_G0026300.1 mouse_genomes_project 2 145581315 145602881 + MGP_NODShiLtJ_P0057259 Polr1b protein_coding protein_coding MGP_NODShiLtJ_T0057260.1 MGP_NODShiLtJ_G0026300.1 mouse_genomes_project 2 145597784 145600602 + Polr1b protein_coding processed_transcript MGP_NODShiLtJ_T0057261.1 MGP_NODShiLtJ_G0026300.1 mouse_genomes_project 2 145600766 145605272 + Polr1b protein_coding processed_transcript MGP_NODShiLtJ_T0057262.1 MGP_NODShiLtJ_G0026300.1 mouse_genomes_project 2 145603849 145605972 + Polr1b protein_coding processed_transcript MGP_NODShiLtJ_T0098012.1 MGP_NODShiLtJ_G0036424.1 mouse_genomes_project 2 135202164 135202283 + n-R5s204 rRNA rRNA MGP_NODShiLtJ_T0056497.1 MGP_NODShiLtJ_G0026138.1 mouse_genomes_project 2 134275623 134280858 + MGP_NODShiLtJ_P0056497 Phgr1 protein_coding protein_coding MGP_NODShiLtJ_T0056498.1 MGP_NODShiLtJ_G0026138.1 mouse_genomes_project 2 134275623 134280859 + MGP_NODShiLtJ_P0056498 Phgr1 protein_coding protein_coding MGP_NODShiLtJ_T0056959.1 MGP_NODShiLtJ_G0026223.1 mouse_genomes_project 2 137955706 137961096 + MGP_NODShiLtJ_P0056959 B2m protein_coding protein_coding MGP_NODShiLtJ_T0058780.1 MGP_NODShiLtJ_G0026652.1 mouse_genomes_project 2 184098982 184162921 - MGP_NODShiLtJ_P0058780 Rims4 protein_coding protein_coding MGP_NODShiLtJ_T0010332.1 MGP_NODShiLtJ_G0008465.1 mouse_genomes_project 2 104496571 104496650 - Mir7001 miRNA miRNA MGP_NODShiLtJ_T0055458.1 MGP_NODShiLtJ_G0025793.1 mouse_genomes_project 2 95369793 95370753 - MGP_NODShiLtJ_P0055458 Olfr1047 protein_coding protein_coding MGP_NODShiLtJ_T0010286.1 MGP_NODShiLtJ_G0008419.1 mouse_genomes_project 2 27233163 27233245 - Mir7578 miRNA miRNA MGP_NODShiLtJ_T0099135.1 MGP_NODShiLtJ_G0037529.1 mouse_genomes_project 2 150457814 150457921 - Gm25258 snRNA snRNA MGP_NODShiLtJ_T0052182.1 MGP_NODShiLtJ_G0025173.1 mouse_genomes_project 2 7703160 7709660 - 9230102O04Rik protein_coding processed_transcript MGP_NODShiLtJ_T0052183.1 MGP_NODShiLtJ_G0025173.1 mouse_genomes_project 2 7703161 7704113 - MGP_NODShiLtJ_P0052183 9230102O04Rik protein_coding protein_coding MGP_NODShiLtJ_T0055567.1 MGP_NODShiLtJ_G0025890.1 mouse_genomes_project 2 98917766 98920482 - MGP_NODShiLtJ_P0055567 protein_coding protein_coding MGP_NODShiLtJ_T0007284.1 MGP_NODShiLtJ_G0005965.1 mouse_genomes_project 2 155955746 156025070 + Gm14061 lincRNA lincRNA MGP_NODShiLtJ_T0055439.1 MGP_NODShiLtJ_G0025775.1 mouse_genomes_project 2 94898020 94898968 + MGP_NODShiLtJ_P0055439 Olfr1022 protein_coding protein_coding MGP_NODShiLtJ_T0013493.1 MGP_NODShiLtJ_G0011601.1 mouse_genomes_project 2 84737068 84737482 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052066.1 MGP_NODShiLtJ_G0025153.1 mouse_genomes_project 2 1780348 1864534 + MGP_NODShiLtJ_P0052066 Bend7 protein_coding protein_coding MGP_NODShiLtJ_T0052067.1 MGP_NODShiLtJ_G0025153.1 mouse_genomes_project 2 1780351 1852900 + MGP_NODShiLtJ_P0052067 Bend7 protein_coding protein_coding MGP_NODShiLtJ_T0052068.1 MGP_NODShiLtJ_G0025153.1 mouse_genomes_project 2 1781280 1864896 + MGP_NODShiLtJ_P0052068 Bend7 protein_coding protein_coding MGP_NODShiLtJ_T0052069.1 MGP_NODShiLtJ_G0025153.1 mouse_genomes_project 2 1814908 1866113 + Bend7 protein_coding processed_transcript MGP_NODShiLtJ_T0007152.1 MGP_NODShiLtJ_G0005857.1 mouse_genomes_project 2 65315349 65317046 + Gm13572 lincRNA lincRNA MGP_NODShiLtJ_T0055499.1 MGP_NODShiLtJ_G0025834.1 mouse_genomes_project 2 97105474 97106419 + MGP_NODShiLtJ_P0055499 Olfr1120 protein_coding protein_coding MGP_NODShiLtJ_T0010377.1 MGP_NODShiLtJ_G0008510.1 mouse_genomes_project 2 184643395 184643466 - Mir7678 miRNA miRNA MGP_NODShiLtJ_T0003843.1 MGP_NODShiLtJ_G0003433.1 mouse_genomes_project 2 9448712 9458656 + Gm10851 antisense antisense MGP_NODShiLtJ_T0058004.1 MGP_NODShiLtJ_G0026493.1 mouse_genomes_project 2 171849500 171889623 + MGP_NODShiLtJ_P0058004 H13 protein_coding protein_coding MGP_NODShiLtJ_T0058005.1 MGP_NODShiLtJ_G0026493.1 mouse_genomes_project 2 171849525 171864431 + H13 protein_coding retained_intron MGP_NODShiLtJ_T0058006.1 MGP_NODShiLtJ_G0026493.1 mouse_genomes_project 2 171849527 171885996 + MGP_NODShiLtJ_P0058006 H13 protein_coding protein_coding MGP_NODShiLtJ_T0058007.1 MGP_NODShiLtJ_G0026493.1 mouse_genomes_project 2 171849527 171867691 + MGP_NODShiLtJ_P0058007 H13 protein_coding protein_coding MGP_NODShiLtJ_T0058008.1 MGP_NODShiLtJ_G0026493.1 mouse_genomes_project 2 171849573 171885088 + MGP_NODShiLtJ_P0058008 H13 protein_coding protein_coding MGP_NODShiLtJ_T0058010.1 MGP_NODShiLtJ_G0026493.1 mouse_genomes_project 2 171872828 171877201 + H13 protein_coding retained_intron MGP_NODShiLtJ_T0003896.1 MGP_NODShiLtJ_G0003474.1 mouse_genomes_project 2 33128658 33130641 + Gm13524 antisense antisense MGP_NODShiLtJ_T0001061.1 MGP_NODShiLtJ_G0000987.1 mouse_genomes_project 2 75695849 75699623 + TEC TEC MGP_NODShiLtJ_T0054194.1 MGP_NODShiLtJ_G0025516.1 mouse_genomes_project 2 37516180 37517128 + MGP_NODShiLtJ_P0054194 Olfr352 protein_coding protein_coding MGP_NODShiLtJ_T0013381.1 MGP_NODShiLtJ_G0011489.1 mouse_genomes_project 2 38425660 38426456 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053549.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30468959 30502704 + MGP_NODShiLtJ_P0053549 Ptpa protein_coding protein_coding MGP_NODShiLtJ_T0053550.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30469051 30502705 + MGP_NODShiLtJ_P0053550 Ptpa protein_coding protein_coding MGP_NODShiLtJ_T0053551.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30469057 30485773 + MGP_NODShiLtJ_P0053551 Ptpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053552.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30469062 30502516 + MGP_NODShiLtJ_P0053552 Ptpa protein_coding protein_coding MGP_NODShiLtJ_T0053553.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30469116 30502703 + Ptpa protein_coding retained_intron MGP_NODShiLtJ_T0053554.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30469222 30482146 + Ptpa protein_coding processed_transcript MGP_NODShiLtJ_T0053555.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30482097 30491797 + Ptpa protein_coding retained_intron MGP_NODShiLtJ_T0053556.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30491924 30501849 + MGP_NODShiLtJ_P0053556 Ptpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053557.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30495446 30502030 + MGP_NODShiLtJ_P0053557 Ptpa protein_coding protein_coding MGP_NODShiLtJ_T0053558.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30496328 30501704 + MGP_NODShiLtJ_P0053558 Ptpa protein_coding protein_coding MGP_NODShiLtJ_T0053559.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30496812 30501798 + Ptpa protein_coding processed_transcript MGP_NODShiLtJ_T0053560.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30500553 30501973 + Ptpa protein_coding processed_transcript MGP_NODShiLtJ_T0053561.1 MGP_NODShiLtJ_G0025407.1 mouse_genomes_project 2 30500613 30501674 + Ptpa protein_coding processed_transcript MGP_NODShiLtJ_T0055397.1 MGP_NODShiLtJ_G0025754.1 mouse_genomes_project 2 93831322 93871927 - MGP_NODShiLtJ_P0055397 P2rx3 protein_coding protein_coding MGP_NODShiLtJ_T0055398.1 MGP_NODShiLtJ_G0025754.1 mouse_genomes_project 2 93831523 93869787 - MGP_NODShiLtJ_P0055398 P2rx3 protein_coding protein_coding MGP_NODShiLtJ_T0055399.1 MGP_NODShiLtJ_G0025754.1 mouse_genomes_project 2 93831693 93871558 - MGP_NODShiLtJ_P0055399 P2rx3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055400.1 MGP_NODShiLtJ_G0025754.1 mouse_genomes_project 2 93858616 93867774 - P2rx3 protein_coding processed_transcript MGP_NODShiLtJ_T0055401.1 MGP_NODShiLtJ_G0025754.1 mouse_genomes_project 2 93866517 93867658 - P2rx3 protein_coding processed_transcript MGP_NODShiLtJ_T0056364.1 MGP_NODShiLtJ_G0026105.1 mouse_genomes_project 2 127153607 127158682 - MGP_NODShiLtJ_P0056364 Emc4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056365.1 MGP_NODShiLtJ_G0026105.1 mouse_genomes_project 2 127154081 127158309 - Emc4 protein_coding processed_transcript MGP_NODShiLtJ_T0004083.1 MGP_NODShiLtJ_G0003606.1 mouse_genomes_project 2 175123567 175124478 - Gm14257 antisense antisense MGP_NODShiLtJ_T0053104.1 MGP_NODShiLtJ_G0025335.1 mouse_genomes_project 2 26652129 26656071 - Surf6 protein_coding processed_transcript MGP_NODShiLtJ_T0053105.1 MGP_NODShiLtJ_G0025335.1 mouse_genomes_project 2 26652426 26655633 - Surf6 protein_coding processed_transcript MGP_NODShiLtJ_T0053106.1 MGP_NODShiLtJ_G0025335.1 mouse_genomes_project 2 26652490 26663776 - Surf6 protein_coding processed_transcript MGP_NODShiLtJ_T0053107.1 MGP_NODShiLtJ_G0025335.1 mouse_genomes_project 2 26653894 26667230 - MGP_NODShiLtJ_P0053107 Surf6 protein_coding protein_coding MGP_NODShiLtJ_T0053108.1 MGP_NODShiLtJ_G0025335.1 mouse_genomes_project 2 26654231 26667201 - MGP_NODShiLtJ_P0053108 Surf6 protein_coding protein_coding MGP_NODShiLtJ_T0053109.1 MGP_NODShiLtJ_G0025335.1 mouse_genomes_project 2 26656134 26667141 - Surf6 protein_coding processed_transcript MGP_NODShiLtJ_T0053110.1 MGP_NODShiLtJ_G0025335.1 mouse_genomes_project 2 26663444 26664119 - Surf6 protein_coding processed_transcript MGP_NODShiLtJ_T0056787.1 MGP_NODShiLtJ_G0026193.1 mouse_genomes_project 2 136709938 136716634 + MGP_NODShiLtJ_P0056787 Ccndbp1 protein_coding protein_coding MGP_NODShiLtJ_T0056788.1 MGP_NODShiLtJ_G0026193.1 mouse_genomes_project 2 136709973 136714450 + Ccndbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056789.1 MGP_NODShiLtJ_G0026193.1 mouse_genomes_project 2 136709978 136718011 + MGP_NODShiLtJ_P0056789 Ccndbp1 protein_coding protein_coding MGP_NODShiLtJ_T0056790.1 MGP_NODShiLtJ_G0026193.1 mouse_genomes_project 2 136710016 136718395 + MGP_NODShiLtJ_P0056790 Ccndbp1 protein_coding protein_coding MGP_NODShiLtJ_T0056791.1 MGP_NODShiLtJ_G0026193.1 mouse_genomes_project 2 136710210 136712081 + Ccndbp1 protein_coding retained_intron MGP_NODShiLtJ_T0056792.1 MGP_NODShiLtJ_G0026193.1 mouse_genomes_project 2 136712556 136713258 + Ccndbp1 protein_coding retained_intron MGP_NODShiLtJ_T0056793.1 MGP_NODShiLtJ_G0026193.1 mouse_genomes_project 2 136713992 136714462 + Ccndbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0053140.1 MGP_NODShiLtJ_G0025341.1 mouse_genomes_project 2 26700180 26709288 + MGP_NODShiLtJ_P0053140 Stkld1 protein_coding protein_coding MGP_NODShiLtJ_T0053141.1 MGP_NODShiLtJ_G0025341.1 mouse_genomes_project 2 26700202 26719786 + MGP_NODShiLtJ_P0053141 Stkld1 protein_coding protein_coding MGP_NODShiLtJ_T0053142.1 MGP_NODShiLtJ_G0025341.1 mouse_genomes_project 2 26701456 26719681 + MGP_NODShiLtJ_P0053142 Stkld1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059135.1 MGP_NODShiLtJ_G0026738.1 mouse_genomes_project 2 188744546 188776850 - Fam65c protein_coding processed_transcript MGP_NODShiLtJ_T0059136.1 MGP_NODShiLtJ_G0026738.1 mouse_genomes_project 2 188744548 188776850 - MGP_NODShiLtJ_P0059136 Fam65c protein_coding protein_coding MGP_NODShiLtJ_T0059137.1 MGP_NODShiLtJ_G0026738.1 mouse_genomes_project 2 188750414 188752097 - Fam65c protein_coding retained_intron MGP_NODShiLtJ_T0059138.1 MGP_NODShiLtJ_G0026738.1 mouse_genomes_project 2 188754244 188756790 - Fam65c protein_coding retained_intron MGP_NODShiLtJ_T0057472.1 MGP_NODShiLtJ_G0026347.1 mouse_genomes_project 2 147946114 148012257 - MGP_NODShiLtJ_P0057472 Rnf24 protein_coding protein_coding MGP_NODShiLtJ_T0057473.1 MGP_NODShiLtJ_G0026347.1 mouse_genomes_project 2 147946115 147975044 - MGP_NODShiLtJ_P0057473 Rnf24 protein_coding protein_coding MGP_NODShiLtJ_T0057474.1 MGP_NODShiLtJ_G0026347.1 mouse_genomes_project 2 147946117 147990616 - MGP_NODShiLtJ_P0057474 Rnf24 protein_coding protein_coding MGP_NODShiLtJ_T0057475.1 MGP_NODShiLtJ_G0026347.1 mouse_genomes_project 2 147957121 148012238 - MGP_NODShiLtJ_P0057475 Rnf24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057476.1 MGP_NODShiLtJ_G0026347.1 mouse_genomes_project 2 147974286 148012268 - Rnf24 protein_coding retained_intron MGP_NODShiLtJ_T0007235.1 MGP_NODShiLtJ_G0005926.1 mouse_genomes_project 2 129904317 130336019 - lincRNA lincRNA MGP_NODShiLtJ_T0053587.1 MGP_NODShiLtJ_G0025412.1 mouse_genomes_project 2 30901265 30906584 - Asb6 protein_coding retained_intron MGP_NODShiLtJ_T0053588.1 MGP_NODShiLtJ_G0025412.1 mouse_genomes_project 2 30901265 30908663 - MGP_NODShiLtJ_P0053588 Asb6 protein_coding protein_coding MGP_NODShiLtJ_T0053589.1 MGP_NODShiLtJ_G0025412.1 mouse_genomes_project 2 30902638 30906595 - MGP_NODShiLtJ_P0053589 Asb6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053590.1 MGP_NODShiLtJ_G0025412.1 mouse_genomes_project 2 30903324 30906621 - Asb6 protein_coding retained_intron MGP_NODShiLtJ_T0053591.1 MGP_NODShiLtJ_G0025412.1 mouse_genomes_project 2 30903789 30905824 - Asb6 protein_coding retained_intron MGP_NODShiLtJ_T0055166.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84465775 84654557 - MGP_NODShiLtJ_P0055166 Ccdc141 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055167.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84465778 84643575 - MGP_NODShiLtJ_P0055167 Ccdc141 protein_coding protein_coding MGP_NODShiLtJ_T0055168.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84467472 84475831 - MGP_NODShiLtJ_P0055168 Ccdc141 protein_coding protein_coding MGP_NODShiLtJ_T0055169.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84470964 84478610 - Ccdc141 protein_coding processed_transcript MGP_NODShiLtJ_T0055170.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84479300 84486563 - Ccdc141 protein_coding retained_intron MGP_NODShiLtJ_T0055171.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84486560 84500862 - Ccdc141 protein_coding retained_intron MGP_NODShiLtJ_T0055172.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84486560 84501512 - MGP_NODShiLtJ_P0055172 Ccdc141 protein_coding protein_coding MGP_NODShiLtJ_T0055173.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84501752 84643576 - Ccdc141 protein_coding retained_intron MGP_NODShiLtJ_T0055174.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84531508 84643550 - Ccdc141 protein_coding retained_intron MGP_NODShiLtJ_T0055175.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84604716 84643540 - MGP_NODShiLtJ_P0055175 Ccdc141 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055176.1 MGP_NODShiLtJ_G0025708.1 mouse_genomes_project 2 84634919 84643516 - MGP_NODShiLtJ_P0055176 Ccdc141 protein_coding protein_coding MGP_NODShiLtJ_T0056115.1 MGP_NODShiLtJ_G0026028.1 mouse_genomes_project 2 116625832 116657059 - MGP_NODShiLtJ_P0056115 Cat protein_coding protein_coding MGP_NODShiLtJ_T0056116.1 MGP_NODShiLtJ_G0026028.1 mouse_genomes_project 2 116626578 116657024 - MGP_NODShiLtJ_P0056116 Cat protein_coding protein_coding MGP_NODShiLtJ_T0059345.1 MGP_NODShiLtJ_G0026795.1 mouse_genomes_project 2 199824517 199878527 + MGP_NODShiLtJ_P0059345 Cdh26 protein_coding protein_coding MGP_NODShiLtJ_T0059346.1 MGP_NODShiLtJ_G0026795.1 mouse_genomes_project 2 199824593 199878529 + MGP_NODShiLtJ_P0059346 Cdh26 protein_coding protein_coding MGP_NODShiLtJ_T0059347.1 MGP_NODShiLtJ_G0026795.1 mouse_genomes_project 2 199849031 199856396 + Cdh26 protein_coding retained_intron MGP_NODShiLtJ_T0052285.1 MGP_NODShiLtJ_G0025188.1 mouse_genomes_project 2 10110796 10314603 - MGP_NODShiLtJ_P0052285 Itga8 protein_coding protein_coding MGP_NODShiLtJ_T0052286.1 MGP_NODShiLtJ_G0025188.1 mouse_genomes_project 2 10111642 10314573 - MGP_NODShiLtJ_P0052286 Itga8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052287.1 MGP_NODShiLtJ_G0025188.1 mouse_genomes_project 2 10113233 10135602 - MGP_NODShiLtJ_P0052287 Itga8 protein_coding protein_coding MGP_NODShiLtJ_T0052288.1 MGP_NODShiLtJ_G0025188.1 mouse_genomes_project 2 10188827 10199491 - Itga8 protein_coding retained_intron MGP_NODShiLtJ_T0052289.1 MGP_NODShiLtJ_G0025188.1 mouse_genomes_project 2 10227118 10252154 - Itga8 protein_coding processed_transcript MGP_NODShiLtJ_T0052290.1 MGP_NODShiLtJ_G0025188.1 mouse_genomes_project 2 10259512 10314603 - Itga8 protein_coding retained_intron MGP_NODShiLtJ_T0052291.1 MGP_NODShiLtJ_G0025188.1 mouse_genomes_project 2 10299767 10314269 - Itga8 protein_coding processed_transcript MGP_NODShiLtJ_T0054157.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36596874 36619044 - MGP_NODShiLtJ_P0054157 Lhx6 protein_coding protein_coding MGP_NODShiLtJ_T0054158.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36596874 36619044 - MGP_NODShiLtJ_P0054158 Lhx6 protein_coding protein_coding MGP_NODShiLtJ_T0054159.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36596874 36620254 - MGP_NODShiLtJ_P0054159 Lhx6 protein_coding protein_coding MGP_NODShiLtJ_T0054160.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36596874 36620391 - MGP_NODShiLtJ_P0054160 Lhx6 protein_coding protein_coding MGP_NODShiLtJ_T0054161.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36596875 36620391 - MGP_NODShiLtJ_P0054161 Lhx6 protein_coding protein_coding MGP_NODShiLtJ_T0054162.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36598608 36609198 - MGP_NODShiLtJ_P0054162 Lhx6 protein_coding protein_coding MGP_NODShiLtJ_T0054163.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36598611 36619874 - MGP_NODShiLtJ_P0054163 Lhx6 protein_coding protein_coding MGP_NODShiLtJ_T0054164.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36609149 36618576 - Lhx6 protein_coding retained_intron MGP_NODShiLtJ_T0054165.1 MGP_NODShiLtJ_G0025498.1 mouse_genomes_project 2 36616309 36620238 - Lhx6 protein_coding processed_transcript MGP_NODShiLtJ_T0013427.1 MGP_NODShiLtJ_G0011535.1 mouse_genomes_project 2 58421478 58422953 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057808.1 MGP_NODShiLtJ_G0026421.1 mouse_genomes_project 2 165895891 165901847 + MGP_NODShiLtJ_P0057808 Pax1 protein_coding protein_coding MGP_NODShiLtJ_T0057809.1 MGP_NODShiLtJ_G0026421.1 mouse_genomes_project 2 165898962 165908322 + MGP_NODShiLtJ_P0057809 Pax1 protein_coding protein_coding MGP_NODShiLtJ_T0057810.1 MGP_NODShiLtJ_G0026421.1 mouse_genomes_project 2 165902249 165927719 + Pax1 protein_coding retained_intron MGP_NODShiLtJ_T0003975.1 MGP_NODShiLtJ_G0003530.1 mouse_genomes_project 2 92328815 92329275 - Gm13686 antisense antisense MGP_NODShiLtJ_T0052001.1 MGP_NODShiLtJ_G0025144.1 mouse_genomes_project 2 308542 333497 - MGP_NODShiLtJ_P0052001 Olah protein_coding protein_coding MGP_NODShiLtJ_T0052002.1 MGP_NODShiLtJ_G0025144.1 mouse_genomes_project 2 308547 365011 - MGP_NODShiLtJ_P0052002 Olah protein_coding protein_coding MGP_NODShiLtJ_T0052003.1 MGP_NODShiLtJ_G0025144.1 mouse_genomes_project 2 308577 333475 - MGP_NODShiLtJ_P0052003 Olah protein_coding protein_coding MGP_NODShiLtJ_T0013384.1 MGP_NODShiLtJ_G0011492.1 mouse_genomes_project 2 39815065 39815652 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101793.1 MGP_NODShiLtJ_G0039961.1 mouse_genomes_project 2 37675045 37675989 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004011.1 MGP_NODShiLtJ_G0003551.1 mouse_genomes_project 2 133780869 133784114 + 1700054M17Rik antisense antisense MGP_NODShiLtJ_T0003877.1 MGP_NODShiLtJ_G0003457.1 mouse_genomes_project 2 26800639 26804197 + Gm13398 antisense antisense MGP_NODShiLtJ_T0056573.1 MGP_NODShiLtJ_G0026156.1 mouse_genomes_project 2 134830436 134837292 + Vps18 protein_coding retained_intron MGP_NODShiLtJ_T0056574.1 MGP_NODShiLtJ_G0026156.1 mouse_genomes_project 2 134830438 134840201 + MGP_NODShiLtJ_P0056574 Vps18 protein_coding protein_coding MGP_NODShiLtJ_T0056575.1 MGP_NODShiLtJ_G0026156.1 mouse_genomes_project 2 134830483 134840074 + Vps18 protein_coding processed_transcript MGP_NODShiLtJ_T0053422.1 MGP_NODShiLtJ_G0025389.1 mouse_genomes_project 2 30090185 30105368 + MGP_NODShiLtJ_P0053422 Set protein_coding protein_coding MGP_NODShiLtJ_T0053423.1 MGP_NODShiLtJ_G0025389.1 mouse_genomes_project 2 30094873 30104622 + MGP_NODShiLtJ_P0053423 Set protein_coding protein_coding MGP_NODShiLtJ_T0053424.1 MGP_NODShiLtJ_G0025389.1 mouse_genomes_project 2 30095720 30106183 + Set protein_coding processed_transcript MGP_NODShiLtJ_T0053425.1 MGP_NODShiLtJ_G0025389.1 mouse_genomes_project 2 30101885 30106007 + MGP_NODShiLtJ_P0053425 Set protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053426.1 MGP_NODShiLtJ_G0025389.1 mouse_genomes_project 2 30102257 30104695 + Set protein_coding processed_transcript MGP_NODShiLtJ_T0053427.1 MGP_NODShiLtJ_G0025389.1 mouse_genomes_project 2 30105234 30106374 + Set protein_coding processed_transcript MGP_NODShiLtJ_T0053009.1 MGP_NODShiLtJ_G0025321.1 mouse_genomes_project 2 26079251 26083231 - Dnlz protein_coding processed_transcript MGP_NODShiLtJ_T0053010.1 MGP_NODShiLtJ_G0025321.1 mouse_genomes_project 2 26079251 26083241 - MGP_NODShiLtJ_P0053010 Dnlz protein_coding protein_coding MGP_NODShiLtJ_T0004071.1 MGP_NODShiLtJ_G0003595.1 mouse_genomes_project 2 170979017 170980658 - Rspo4os antisense antisense MGP_NODShiLtJ_T0013321.1 MGP_NODShiLtJ_G0011429.1 mouse_genomes_project 2 15607802 15608813 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013635.1 MGP_NODShiLtJ_G0011743.1 mouse_genomes_project 2 144105532 144107375 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100409.1 MGP_NODShiLtJ_G0038803.1 mouse_genomes_project 2 170034646 170034775 + Gm22187 snoRNA snoRNA MGP_NODShiLtJ_T0055081.1 MGP_NODShiLtJ_G0025682.1 mouse_genomes_project 2 81951377 81954665 + MGP_NODShiLtJ_P0055081 Hoxd13 protein_coding protein_coding MGP_NODShiLtJ_T0057173.1 MGP_NODShiLtJ_G0026275.1 mouse_genomes_project 2 143762729 143766747 + MGP_NODShiLtJ_P0057173 Adra2b protein_coding protein_coding MGP_NODShiLtJ_T0057174.1 MGP_NODShiLtJ_G0026275.1 mouse_genomes_project 2 143762807 143766747 + MGP_NODShiLtJ_P0057174 Adra2b protein_coding protein_coding MGP_NODShiLtJ_T0055578.1 MGP_NODShiLtJ_G0025901.1 mouse_genomes_project 2 99340884 99350888 - MGP_NODShiLtJ_P0055578 protein_coding protein_coding MGP_NODShiLtJ_T0059090.1 MGP_NODShiLtJ_G0026728.1 mouse_genomes_project 2 187848292 187908717 - MGP_NODShiLtJ_P0059090 Ptgis protein_coding protein_coding MGP_NODShiLtJ_T0059091.1 MGP_NODShiLtJ_G0026728.1 mouse_genomes_project 2 187862636 187908732 - MGP_NODShiLtJ_P0059091 Ptgis protein_coding protein_coding MGP_NODShiLtJ_T0059092.1 MGP_NODShiLtJ_G0026728.1 mouse_genomes_project 2 187866289 187868184 - Ptgis protein_coding retained_intron MGP_NODShiLtJ_T0013305.1 MGP_NODShiLtJ_G0011413.1 mouse_genomes_project 2 8828070 8828908 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052437.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17517863 17524720 + MGP_NODShiLtJ_P0052437 Commd3 protein_coding protein_coding MGP_NODShiLtJ_T0052438.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17517902 17524721 + MGP_NODShiLtJ_P0052438 Commd3 protein_coding protein_coding MGP_NODShiLtJ_T0052439.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17517912 17523183 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052440.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17517914 17523126 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052441.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17517915 17523003 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052442.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17518002 17522891 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052443.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17522148 17522888 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052444.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17522451 17524418 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052445.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17522575 17524471 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052446.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17522837 17524413 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052447.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17522914 17523496 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0052448.1 MGP_NODShiLtJ_G0025213.1 mouse_genomes_project 2 17523139 17523991 + Commd3 protein_coding processed_transcript MGP_NODShiLtJ_T0100402.1 MGP_NODShiLtJ_G0038796.1 mouse_genomes_project 2 160954459 160954575 + Gm22310 snoRNA snoRNA MGP_NODShiLtJ_T0007068.1 MGP_NODShiLtJ_G0005793.1 mouse_genomes_project 2 3352392 3359593 + Gm10857 lincRNA lincRNA MGP_NODShiLtJ_T0007069.1 MGP_NODShiLtJ_G0005793.1 mouse_genomes_project 2 3352406 3359538 + Gm10857 lincRNA lincRNA MGP_NODShiLtJ_T0055462.1 MGP_NODShiLtJ_G0025797.1 mouse_genomes_project 2 95489863 95490805 - MGP_NODShiLtJ_P0055462 Olfr1053 protein_coding protein_coding MGP_NODShiLtJ_T0059581.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106389 203125194 + MGP_NODShiLtJ_P0059581 Tpd52l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059582.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106411 203118377 + Tpd52l2 protein_coding processed_transcript MGP_NODShiLtJ_T0059583.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106412 203128045 + MGP_NODShiLtJ_P0059583 Tpd52l2 protein_coding protein_coding MGP_NODShiLtJ_T0059584.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106428 203127450 + MGP_NODShiLtJ_P0059584 Tpd52l2 protein_coding protein_coding MGP_NODShiLtJ_T0059585.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106430 203125205 + MGP_NODShiLtJ_P0059585 Tpd52l2 protein_coding protein_coding MGP_NODShiLtJ_T0059586.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106434 203128041 + MGP_NODShiLtJ_P0059586 Tpd52l2 protein_coding protein_coding MGP_NODShiLtJ_T0059587.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106446 203126335 + MGP_NODShiLtJ_P0059587 Tpd52l2 protein_coding protein_coding MGP_NODShiLtJ_T0059588.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106476 203111800 + Tpd52l2 protein_coding retained_intron MGP_NODShiLtJ_T0059589.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203106478 203125466 + MGP_NODShiLtJ_P0059589 Tpd52l2 protein_coding protein_coding MGP_NODShiLtJ_T0059590.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203109092 203123135 + MGP_NODShiLtJ_P0059590 Tpd52l2 protein_coding protein_coding MGP_NODShiLtJ_T0059591.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203109113 203112396 + Tpd52l2 protein_coding retained_intron MGP_NODShiLtJ_T0059592.1 MGP_NODShiLtJ_G0026842.1 mouse_genomes_project 2 203122656 203125412 + Tpd52l2 protein_coding retained_intron MGP_NODShiLtJ_T0056003.1 MGP_NODShiLtJ_G0026005.1 mouse_genomes_project 2 105069394 105070634 - MGP_NODShiLtJ_P0056003 protein_coding protein_coding MGP_NODShiLtJ_T0056004.1 MGP_NODShiLtJ_G0026005.1 mouse_genomes_project 2 105069400 105070786 - MGP_NODShiLtJ_P0056004 protein_coding protein_coding MGP_NODShiLtJ_T0013634.1 MGP_NODShiLtJ_G0011742.1 mouse_genomes_project 2 144012063 144013083 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013704.1 MGP_NODShiLtJ_G0011812.1 mouse_genomes_project 2 171784094 171784311 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055547.1 MGP_NODShiLtJ_G0025871.1 mouse_genomes_project 2 98146650 98147601 - MGP_NODShiLtJ_P0055547 Olfr1163 protein_coding protein_coding MGP_NODShiLtJ_T0054515.1 MGP_NODShiLtJ_G0025581.1 mouse_genomes_project 2 63202909 63252197 + MGP_NODShiLtJ_P0054515 Galnt5 protein_coding protein_coding MGP_NODShiLtJ_T0054516.1 MGP_NODShiLtJ_G0025581.1 mouse_genomes_project 2 63202909 63244049 + MGP_NODShiLtJ_P0054516 Galnt5 protein_coding protein_coding MGP_NODShiLtJ_T0004113.1 MGP_NODShiLtJ_G0003628.1 mouse_genomes_project 2 185878119 185886253 + Gm14437 antisense antisense MGP_NODShiLtJ_T0013565.1 MGP_NODShiLtJ_G0011673.1 mouse_genomes_project 2 112245418 112246046 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052142.1 MGP_NODShiLtJ_G0025169.1 mouse_genomes_project 2 3549260 3684818 + MGP_NODShiLtJ_P0052142 Usp6nl protein_coding protein_coding MGP_NODShiLtJ_T0052143.1 MGP_NODShiLtJ_G0025169.1 mouse_genomes_project 2 3550128 3659440 + Usp6nl protein_coding processed_transcript MGP_NODShiLtJ_T0052144.1 MGP_NODShiLtJ_G0025169.1 mouse_genomes_project 2 3581969 3681922 + MGP_NODShiLtJ_P0052144 Usp6nl protein_coding protein_coding MGP_NODShiLtJ_T0052145.1 MGP_NODShiLtJ_G0025169.1 mouse_genomes_project 2 3659349 3663263 + Usp6nl protein_coding processed_transcript MGP_NODShiLtJ_T0013363.1 MGP_NODShiLtJ_G0011471.1 mouse_genomes_project 2 32189227 32190633 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101782.1 MGP_NODShiLtJ_G0039950.1 mouse_genomes_project 2 6722490 6724469 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0057871.1 MGP_NODShiLtJ_G0026450.1 mouse_genomes_project 2 169695709 169720982 + MGP_NODShiLtJ_P0057871 Entpd6 protein_coding protein_coding MGP_NODShiLtJ_T0057872.1 MGP_NODShiLtJ_G0026450.1 mouse_genomes_project 2 169695748 169712629 + Entpd6 protein_coding retained_intron MGP_NODShiLtJ_T0057873.1 MGP_NODShiLtJ_G0026450.1 mouse_genomes_project 2 169695759 169713100 + Entpd6 protein_coding processed_transcript MGP_NODShiLtJ_T0057874.1 MGP_NODShiLtJ_G0026450.1 mouse_genomes_project 2 169695838 169701203 + Entpd6 protein_coding processed_transcript MGP_NODShiLtJ_T0013521.1 MGP_NODShiLtJ_G0011629.1 mouse_genomes_project 2 94099565 94099786 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054246.1 MGP_NODShiLtJ_G0025536.1 mouse_genomes_project 2 38539508 38563017 + MGP_NODShiLtJ_P0054246 Crb2 protein_coding protein_coding MGP_NODShiLtJ_T0054247.1 MGP_NODShiLtJ_G0025536.1 mouse_genomes_project 2 38555054 38557407 + MGP_NODShiLtJ_P0054247 Crb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054248.1 MGP_NODShiLtJ_G0025536.1 mouse_genomes_project 2 38559074 38560530 + Crb2 protein_coding processed_transcript MGP_NODShiLtJ_T0059123.1 MGP_NODShiLtJ_G0026735.1 mouse_genomes_project 2 188376097 188395208 - MGP_NODShiLtJ_P0059123 protein_coding protein_coding MGP_NODShiLtJ_T0059124.1 MGP_NODShiLtJ_G0026735.1 mouse_genomes_project 2 188376652 188427741 - protein_coding processed_transcript MGP_NODShiLtJ_T0059125.1 MGP_NODShiLtJ_G0026735.1 mouse_genomes_project 2 188377160 188378711 - protein_coding retained_intron MGP_NODShiLtJ_T0059126.1 MGP_NODShiLtJ_G0026735.1 mouse_genomes_project 2 188387718 188395206 - protein_coding retained_intron MGP_NODShiLtJ_T0013748.1 MGP_NODShiLtJ_G0011856.1 mouse_genomes_project 2 187970524 187970883 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003945.1 MGP_NODShiLtJ_G0003512.1 mouse_genomes_project 2 77391242 77396970 - Erich2os antisense antisense MGP_NODShiLtJ_T0053492.1 MGP_NODShiLtJ_G0025402.1 mouse_genomes_project 2 30329078 30389444 + MGP_NODShiLtJ_P0053492 protein_coding protein_coding MGP_NODShiLtJ_T0053493.1 MGP_NODShiLtJ_G0025402.1 mouse_genomes_project 2 30329078 30350221 + MGP_NODShiLtJ_P0053493 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053494.1 MGP_NODShiLtJ_G0025402.1 mouse_genomes_project 2 30329098 30346582 + protein_coding processed_transcript MGP_NODShiLtJ_T0053495.1 MGP_NODShiLtJ_G0025402.1 mouse_genomes_project 2 30329105 30346300 + MGP_NODShiLtJ_P0053495 protein_coding protein_coding MGP_NODShiLtJ_T0053496.1 MGP_NODShiLtJ_G0025402.1 mouse_genomes_project 2 30329108 30346299 + MGP_NODShiLtJ_P0053496 protein_coding protein_coding MGP_NODShiLtJ_T0053497.1 MGP_NODShiLtJ_G0025402.1 mouse_genomes_project 2 30329110 30371853 + protein_coding retained_intron MGP_NODShiLtJ_T0053498.1 MGP_NODShiLtJ_G0025402.1 mouse_genomes_project 2 30388117 30389323 + protein_coding retained_intron MGP_NODShiLtJ_T0057252.1 MGP_NODShiLtJ_G0026297.1 mouse_genomes_project 2 145437836 145495108 + MGP_NODShiLtJ_P0057252 Zc3h6 protein_coding protein_coding MGP_NODShiLtJ_T0057253.1 MGP_NODShiLtJ_G0026297.1 mouse_genomes_project 2 145437843 145464883 + MGP_NODShiLtJ_P0057253 Zc3h6 protein_coding protein_coding MGP_NODShiLtJ_T0013629.1 MGP_NODShiLtJ_G0011737.1 mouse_genomes_project 2 138026435 138026781 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004055.1 MGP_NODShiLtJ_G0003583.1 mouse_genomes_project 2 161785567 161798900 - Pcsk2os1 antisense antisense MGP_NODShiLtJ_T0004056.1 MGP_NODShiLtJ_G0003583.1 mouse_genomes_project 2 161788059 161796063 - Pcsk2os1 antisense antisense MGP_NODShiLtJ_T0017775.1 MGP_NODShiLtJ_G0015363.1 mouse_genomes_project 2 193609920 193627853 - Gm14455 processed_transcript processed_transcript MGP_NODShiLtJ_T0058326.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175511413 175541456 + Cep250 protein_coding retained_intron MGP_NODShiLtJ_T0058327.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175511518 175555078 + MGP_NODShiLtJ_P0058327 Cep250 protein_coding protein_coding MGP_NODShiLtJ_T0058328.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175511518 175553346 + MGP_NODShiLtJ_P0058328 Cep250 protein_coding protein_coding MGP_NODShiLtJ_T0058329.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175511518 175555078 + MGP_NODShiLtJ_P0058329 Cep250 protein_coding protein_coding MGP_NODShiLtJ_T0058330.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175511532 175529365 + MGP_NODShiLtJ_P0058330 Cep250 protein_coding protein_coding MGP_NODShiLtJ_T0058331.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175511554 175522875 + MGP_NODShiLtJ_P0058331 Cep250 protein_coding protein_coding MGP_NODShiLtJ_T0058333.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175531299 175555078 + Cep250 protein_coding retained_intron MGP_NODShiLtJ_T0058334.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175534417 175536305 + Cep250 protein_coding retained_intron MGP_NODShiLtJ_T0058335.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175540725 175544422 + MGP_NODShiLtJ_P0058335 Cep250 protein_coding protein_coding MGP_NODShiLtJ_T0058336.1 MGP_NODShiLtJ_G0026570.1 mouse_genomes_project 2 175540757 175545415 + MGP_NODShiLtJ_P0058336 Cep250 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097794.1 MGP_NODShiLtJ_G0036206.1 mouse_genomes_project 2 12837200 12837822 - pseudogene pseudogene MGP_NODShiLtJ_T0055527.1 MGP_NODShiLtJ_G0025853.1 mouse_genomes_project 2 97655560 97657609 - MGP_NODShiLtJ_P0055527 Olfr1138 protein_coding protein_coding MGP_NODShiLtJ_T0007123.1 MGP_NODShiLtJ_G0005834.1 mouse_genomes_project 2 34460646 34474713 - Gm38389 lincRNA lincRNA MGP_NODShiLtJ_T0003966.1 MGP_NODShiLtJ_G0003525.1 mouse_genomes_project 2 81986333 81996618 - Hoxd3os1 antisense antisense MGP_NODShiLtJ_T0003967.1 MGP_NODShiLtJ_G0003525.1 mouse_genomes_project 2 81993918 81997090 - Hoxd3os1 antisense antisense MGP_NODShiLtJ_T0003968.1 MGP_NODShiLtJ_G0003525.1 mouse_genomes_project 2 81994068 82000557 - Hoxd3os1 antisense antisense MGP_NODShiLtJ_T0003969.1 MGP_NODShiLtJ_G0003525.1 mouse_genomes_project 2 81997689 82000691 - Hoxd3os1 antisense antisense MGP_NODShiLtJ_T0003964.1 MGP_NODShiLtJ_G0003523.1 mouse_genomes_project 2 81846871 81852330 + antisense antisense MGP_NODShiLtJ_T0010326.1 MGP_NODShiLtJ_G0008459.1 mouse_genomes_project 2 102310499 102311260 - miRNA miRNA MGP_NODShiLtJ_T0053725.1 MGP_NODShiLtJ_G0025434.1 mouse_genomes_project 2 32308240 32326288 + MGP_NODShiLtJ_P0053725 Plpp7 protein_coding protein_coding MGP_NODShiLtJ_T0053726.1 MGP_NODShiLtJ_G0025434.1 mouse_genomes_project 2 32308277 32325594 + MGP_NODShiLtJ_P0053726 Plpp7 protein_coding protein_coding MGP_NODShiLtJ_T0053727.1 MGP_NODShiLtJ_G0025434.1 mouse_genomes_project 2 32308867 32326276 + MGP_NODShiLtJ_P0053727 Plpp7 protein_coding protein_coding MGP_NODShiLtJ_T0013441.1 MGP_NODShiLtJ_G0011549.1 mouse_genomes_project 2 64212372 64213159 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054882.1 MGP_NODShiLtJ_G0025646.1 mouse_genomes_project 2 77361712 77364480 + MGP_NODShiLtJ_P0054882 Sp5 protein_coding protein_coding MGP_NODShiLtJ_T0059226.1 MGP_NODShiLtJ_G0026761.1 mouse_genomes_project 2 193547420 193552810 + MGP_NODShiLtJ_P0059226 Cstf1 protein_coding protein_coding MGP_NODShiLtJ_T0059227.1 MGP_NODShiLtJ_G0026761.1 mouse_genomes_project 2 193547473 193559188 + MGP_NODShiLtJ_P0059227 Cstf1 protein_coding protein_coding MGP_NODShiLtJ_T0007266.1 MGP_NODShiLtJ_G0005950.1 mouse_genomes_project 2 144872291 144873202 + Gm14010 lincRNA lincRNA MGP_NODShiLtJ_T0007306.1 MGP_NODShiLtJ_G0005982.1 mouse_genomes_project 2 174167871 174169171 - Gm14216 lincRNA lincRNA MGP_NODShiLtJ_T0007307.1 MGP_NODShiLtJ_G0005982.1 mouse_genomes_project 2 174167889 174187226 - Gm14216 lincRNA lincRNA MGP_NODShiLtJ_T0098296.1 MGP_NODShiLtJ_G0036702.1 mouse_genomes_project 2 1112935 1116285 + Gm10862 sense_intronic sense_intronic MGP_NODShiLtJ_T0053536.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30453394 30468692 - MGP_NODShiLtJ_P0053536 Crat protein_coding protein_coding MGP_NODShiLtJ_T0053537.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30453399 30459604 - Crat protein_coding processed_transcript MGP_NODShiLtJ_T0053538.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30454024 30468734 - MGP_NODShiLtJ_P0053538 Crat protein_coding protein_coding MGP_NODShiLtJ_T0053539.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30455421 30458212 - MGP_NODShiLtJ_P0053539 Crat protein_coding protein_coding MGP_NODShiLtJ_T0053540.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30455501 30468445 - MGP_NODShiLtJ_P0053540 Crat protein_coding protein_coding MGP_NODShiLtJ_T0053541.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30455560 30457885 - MGP_NODShiLtJ_P0053541 Crat protein_coding protein_coding MGP_NODShiLtJ_T0053542.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30460994 30468229 - MGP_NODShiLtJ_P0053542 Crat protein_coding protein_coding MGP_NODShiLtJ_T0053543.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30461039 30468469 - MGP_NODShiLtJ_P0053543 Crat protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053544.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30465969 30467260 - Crat protein_coding processed_transcript MGP_NODShiLtJ_T0053545.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30466065 30468439 - MGP_NODShiLtJ_P0053545 Crat protein_coding protein_coding MGP_NODShiLtJ_T0053546.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30466086 30468254 - MGP_NODShiLtJ_P0053546 Crat protein_coding protein_coding MGP_NODShiLtJ_T0053547.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30466980 30468521 - Crat protein_coding processed_transcript MGP_NODShiLtJ_T0053548.1 MGP_NODShiLtJ_G0025406.1 mouse_genomes_project 2 30467515 30468328 - MGP_NODShiLtJ_P0053548 Crat protein_coding protein_coding MGP_NODShiLtJ_T0007149.1 MGP_NODShiLtJ_G0005855.1 mouse_genomes_project 2 59873176 59886807 + Gm14033 lincRNA lincRNA MGP_NODShiLtJ_T0007150.1 MGP_NODShiLtJ_G0005855.1 mouse_genomes_project 2 59873201 59899799 + Gm14033 lincRNA lincRNA MGP_NODShiLtJ_T0053565.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870005 30878866 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053566.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870537 30876941 - MGP_NODShiLtJ_P0053566 1700001O22Rik protein_coding protein_coding MGP_NODShiLtJ_T0053567.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870704 30871901 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053568.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870799 30878892 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053569.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870802 30878875 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053570.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870809 30876235 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053571.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870816 30878888 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053572.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870840 30878874 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053573.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870893 30878875 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053574.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30870910 30872112 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053575.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30871344 30878875 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053576.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30871418 30878875 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053577.1 MGP_NODShiLtJ_G0025410.1 mouse_genomes_project 2 30872490 30878854 - 1700001O22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0057960.1 MGP_NODShiLtJ_G0026472.1 mouse_genomes_project 2 171358166 171411439 + MGP_NODShiLtJ_P0057960 Gm10031 protein_coding protein_coding MGP_NODShiLtJ_T0057961.1 MGP_NODShiLtJ_G0026472.1 mouse_genomes_project 2 171358203 171402931 + Gm10031 protein_coding retained_intron MGP_NODShiLtJ_T0057962.1 MGP_NODShiLtJ_G0026472.1 mouse_genomes_project 2 171358223 171396832 + MGP_NODShiLtJ_P0057962 Gm10031 protein_coding protein_coding MGP_NODShiLtJ_T0057963.1 MGP_NODShiLtJ_G0026472.1 mouse_genomes_project 2 171358235 171393427 + MGP_NODShiLtJ_P0057963 Gm10031 protein_coding protein_coding MGP_NODShiLtJ_T0057964.1 MGP_NODShiLtJ_G0026472.1 mouse_genomes_project 2 171358240 171388850 + Gm10031 protein_coding retained_intron MGP_NODShiLtJ_T0055519.1 MGP_NODShiLtJ_G0025846.1 mouse_genomes_project 2 97499346 97500249 + MGP_NODShiLtJ_P0055519 Olfr1129 protein_coding protein_coding MGP_NODShiLtJ_T0052663.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24592649 24685424 + MGP_NODShiLtJ_P0052663 Pnpla7 protein_coding protein_coding MGP_NODShiLtJ_T0052664.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24592689 24685424 + MGP_NODShiLtJ_P0052664 Pnpla7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052665.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24592704 24598310 + MGP_NODShiLtJ_P0052665 Pnpla7 protein_coding protein_coding MGP_NODShiLtJ_T0052666.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24592705 24614008 + MGP_NODShiLtJ_P0052666 Pnpla7 protein_coding protein_coding MGP_NODShiLtJ_T0052667.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24592717 24596378 + Pnpla7 protein_coding processed_transcript MGP_NODShiLtJ_T0052668.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24592764 24668439 + Pnpla7 protein_coding retained_intron MGP_NODShiLtJ_T0052669.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24598390 24604232 + Pnpla7 protein_coding processed_transcript MGP_NODShiLtJ_T0052670.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24614362 24617378 + Pnpla7 protein_coding retained_intron MGP_NODShiLtJ_T0052671.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24614854 24637494 + MGP_NODShiLtJ_P0052671 Pnpla7 protein_coding protein_coding MGP_NODShiLtJ_T0052672.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24668594 24685424 + Pnpla7 protein_coding retained_intron MGP_NODShiLtJ_T0052673.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24682718 24683457 + Pnpla7 protein_coding retained_intron MGP_NODShiLtJ_T0052674.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24683032 24685135 + MGP_NODShiLtJ_P0052674 Pnpla7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052675.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24683087 24683703 + Pnpla7 protein_coding retained_intron MGP_NODShiLtJ_T0052676.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24683274 24684218 + Pnpla7 protein_coding retained_intron MGP_NODShiLtJ_T0052677.1 MGP_NODShiLtJ_G0025255.1 mouse_genomes_project 2 24684520 24685222 + Pnpla7 protein_coding retained_intron MGP_NODShiLtJ_T0055449.1 MGP_NODShiLtJ_G0025784.1 mouse_genomes_project 2 95149195 95157725 + MGP_NODShiLtJ_P0055449 protein_coding protein_coding MGP_NODShiLtJ_T0056542.1 MGP_NODShiLtJ_G0026148.1 mouse_genomes_project 2 134669105 134690837 - MGP_NODShiLtJ_P0056542 Rmdn3 protein_coding protein_coding MGP_NODShiLtJ_T0056543.1 MGP_NODShiLtJ_G0026148.1 mouse_genomes_project 2 134671159 134672980 - Rmdn3 protein_coding retained_intron MGP_NODShiLtJ_T0056544.1 MGP_NODShiLtJ_G0026148.1 mouse_genomes_project 2 134674522 134681252 - Rmdn3 protein_coding retained_intron MGP_NODShiLtJ_T0056545.1 MGP_NODShiLtJ_G0026148.1 mouse_genomes_project 2 134679970 134681261 - Rmdn3 protein_coding retained_intron MGP_NODShiLtJ_T0056546.1 MGP_NODShiLtJ_G0026148.1 mouse_genomes_project 2 134687840 134690627 - MGP_NODShiLtJ_P0056546 Rmdn3 protein_coding protein_coding MGP_NODShiLtJ_T0056547.1 MGP_NODShiLtJ_G0026148.1 mouse_genomes_project 2 134687870 134690751 - MGP_NODShiLtJ_P0056547 Rmdn3 protein_coding protein_coding MGP_NODShiLtJ_T0056548.1 MGP_NODShiLtJ_G0026148.1 mouse_genomes_project 2 134687880 134690767 - MGP_NODShiLtJ_P0056548 Rmdn3 protein_coding protein_coding MGP_NODShiLtJ_T0004046.1 MGP_NODShiLtJ_G0003576.1 mouse_genomes_project 2 149620072 149621330 - Gm14104 antisense antisense MGP_NODShiLtJ_T0057535.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149278099 149330065 - MGP_NODShiLtJ_P0057535 Gpcpd1 protein_coding protein_coding MGP_NODShiLtJ_T0057536.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149278106 149291111 - Gpcpd1 protein_coding retained_intron MGP_NODShiLtJ_T0057537.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149278106 149330062 - MGP_NODShiLtJ_P0057537 Gpcpd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057538.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149278106 149330075 - MGP_NODShiLtJ_P0057538 Gpcpd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057539.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149278106 149330005 - MGP_NODShiLtJ_P0057539 Gpcpd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057540.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149283176 149287207 - MGP_NODShiLtJ_P0057540 Gpcpd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057541.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149300443 149330014 - MGP_NODShiLtJ_P0057541 Gpcpd1 protein_coding protein_coding MGP_NODShiLtJ_T0057542.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149304274 149339556 - MGP_NODShiLtJ_P0057542 Gpcpd1 protein_coding protein_coding MGP_NODShiLtJ_T0057543.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149304386 149330044 - Gpcpd1 protein_coding processed_transcript MGP_NODShiLtJ_T0057544.1 MGP_NODShiLtJ_G0026360.1 mouse_genomes_project 2 149316159 149330073 - Gpcpd1 protein_coding processed_transcript MGP_NODShiLtJ_T0099119.1 MGP_NODShiLtJ_G0037513.1 mouse_genomes_project 2 94921238 94921418 - Gm24037 snRNA snRNA MGP_NODShiLtJ_T0017733.1 MGP_NODShiLtJ_G0015343.1 mouse_genomes_project 2 156787646 157303205 - processed_transcript processed_transcript MGP_NODShiLtJ_T0056471.1 MGP_NODShiLtJ_G0026132.1 mouse_genomes_project 2 134016847 134039553 - MGP_NODShiLtJ_P0056471 Bmf protein_coding protein_coding MGP_NODShiLtJ_T0056472.1 MGP_NODShiLtJ_G0026132.1 mouse_genomes_project 2 134018322 134037421 - MGP_NODShiLtJ_P0056472 Bmf protein_coding protein_coding MGP_NODShiLtJ_T0056473.1 MGP_NODShiLtJ_G0026132.1 mouse_genomes_project 2 134020060 134034450 - Bmf protein_coding processed_transcript MGP_NODShiLtJ_T0056474.1 MGP_NODShiLtJ_G0026132.1 mouse_genomes_project 2 134020141 134035178 - Bmf protein_coding processed_transcript MGP_NODShiLtJ_T0056475.1 MGP_NODShiLtJ_G0026132.1 mouse_genomes_project 2 134020508 134039528 - Bmf protein_coding processed_transcript MGP_NODShiLtJ_T0056476.1 MGP_NODShiLtJ_G0026132.1 mouse_genomes_project 2 134035045 134036889 - Bmf protein_coding processed_transcript MGP_NODShiLtJ_T0056477.1 MGP_NODShiLtJ_G0026132.1 mouse_genomes_project 2 134035097 134037461 - Bmf protein_coding processed_transcript MGP_NODShiLtJ_T0056478.1 MGP_NODShiLtJ_G0026132.1 mouse_genomes_project 2 134036770 134039541 - Bmf protein_coding processed_transcript MGP_NODShiLtJ_T0058037.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172165898 172220001 + MGP_NODShiLtJ_P0058037 Ttll9 protein_coding protein_coding MGP_NODShiLtJ_T0058038.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172165919 172214036 + MGP_NODShiLtJ_P0058038 Ttll9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058039.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172165919 172214029 + MGP_NODShiLtJ_P0058039 Ttll9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058040.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172165919 172214080 + MGP_NODShiLtJ_P0058040 Ttll9 protein_coding protein_coding MGP_NODShiLtJ_T0058041.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172165924 172219633 + MGP_NODShiLtJ_P0058041 Ttll9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058042.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172175737 172220001 + MGP_NODShiLtJ_P0058042 Ttll9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058043.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172177023 172188010 + MGP_NODShiLtJ_P0058043 Ttll9 protein_coding protein_coding MGP_NODShiLtJ_T0058044.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172193066 172204310 + Ttll9 protein_coding retained_intron MGP_NODShiLtJ_T0058045.1 MGP_NODShiLtJ_G0026502.1 mouse_genomes_project 2 172213630 172221133 + Ttll9 protein_coding retained_intron MGP_NODShiLtJ_T0099145.1 MGP_NODShiLtJ_G0037539.1 mouse_genomes_project 2 184918278 184918385 + Gm25512 snRNA snRNA MGP_NODShiLtJ_T0053849.1 MGP_NODShiLtJ_G0025451.1 mouse_genomes_project 2 32852418 32865187 + MGP_NODShiLtJ_P0053849 St6galnac4 protein_coding protein_coding MGP_NODShiLtJ_T0053850.1 MGP_NODShiLtJ_G0025451.1 mouse_genomes_project 2 32852462 32859599 + St6galnac4 protein_coding retained_intron MGP_NODShiLtJ_T0053851.1 MGP_NODShiLtJ_G0025451.1 mouse_genomes_project 2 32852904 32863025 + St6galnac4 protein_coding retained_intron MGP_NODShiLtJ_T0053852.1 MGP_NODShiLtJ_G0025451.1 mouse_genomes_project 2 32852948 32864399 + MGP_NODShiLtJ_P0053852 St6galnac4 protein_coding protein_coding MGP_NODShiLtJ_T0053853.1 MGP_NODShiLtJ_G0025451.1 mouse_genomes_project 2 32859599 32862513 + MGP_NODShiLtJ_P0053853 St6galnac4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057444.1 MGP_NODShiLtJ_G0026342.1 mouse_genomes_project 2 147809420 147814307 - MGP_NODShiLtJ_P0057444 Cenpb protein_coding protein_coding MGP_NODShiLtJ_T0052561.1 MGP_NODShiLtJ_G0025234.1 mouse_genomes_project 2 22342858 22397568 - MGP_NODShiLtJ_P0052561 Mastl protein_coding protein_coding MGP_NODShiLtJ_T0052562.1 MGP_NODShiLtJ_G0025234.1 mouse_genomes_project 2 22378252 22397441 - Mastl protein_coding processed_transcript MGP_NODShiLtJ_T0007132.1 MGP_NODShiLtJ_G0005840.1 mouse_genomes_project 2 47700556 47713446 + Gm28643 lincRNA lincRNA MGP_NODShiLtJ_T0007172.1 MGP_NODShiLtJ_G0005874.1 mouse_genomes_project 2 81118152 81126007 + Gm10822 lincRNA lincRNA MGP_NODShiLtJ_T0100422.1 MGP_NODShiLtJ_G0038816.1 mouse_genomes_project 2 182910827 182910953 + Gm22936 snoRNA snoRNA MGP_NODShiLtJ_T0007251.1 MGP_NODShiLtJ_G0005937.1 mouse_genomes_project 2 133242042 133248223 - Gm13985 lincRNA lincRNA MGP_NODShiLtJ_T0056989.1 MGP_NODShiLtJ_G0026234.1 mouse_genomes_project 2 138517990 138534349 - MGP_NODShiLtJ_P0056989 Gatm protein_coding protein_coding MGP_NODShiLtJ_T0056990.1 MGP_NODShiLtJ_G0026234.1 mouse_genomes_project 2 138518888 138521910 - Gatm protein_coding processed_transcript MGP_NODShiLtJ_T0056991.1 MGP_NODShiLtJ_G0026234.1 mouse_genomes_project 2 138519005 138522188 - Gatm protein_coding retained_intron MGP_NODShiLtJ_T0098297.1 MGP_NODShiLtJ_G0036703.1 mouse_genomes_project 2 1125696 1128756 + Gm38085 sense_intronic sense_intronic MGP_NODShiLtJ_T0052214.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9397959 9484805 - MGP_NODShiLtJ_P0052214 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052215.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9398317 9428569 - MGP_NODShiLtJ_P0052215 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052216.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9398350 9428569 - MGP_NODShiLtJ_P0052216 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052217.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9398352 9428569 - MGP_NODShiLtJ_P0052217 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052218.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9398352 9484650 - MGP_NODShiLtJ_P0052218 Pfkfb3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052219.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9398354 9424855 - Pfkfb3 protein_coding processed_transcript MGP_NODShiLtJ_T0052220.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9400933 9428569 - MGP_NODShiLtJ_P0052220 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052221.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9400933 9428168 - MGP_NODShiLtJ_P0052221 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052222.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9400933 9428569 - MGP_NODShiLtJ_P0052222 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052223.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9400933 9428569 - MGP_NODShiLtJ_P0052223 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052224.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9402290 9428558 - MGP_NODShiLtJ_P0052224 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052225.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9402290 9428558 - MGP_NODShiLtJ_P0052225 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052226.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9404481 9428569 - MGP_NODShiLtJ_P0052226 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052227.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9404493 9428569 - MGP_NODShiLtJ_P0052227 Pfkfb3 protein_coding protein_coding MGP_NODShiLtJ_T0052228.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9406389 9428543 - Pfkfb3 protein_coding retained_intron MGP_NODShiLtJ_T0052229.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9407499 9408601 - Pfkfb3 protein_coding retained_intron MGP_NODShiLtJ_T0052230.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9416828 9428485 - Pfkfb3 protein_coding processed_transcript MGP_NODShiLtJ_T0052231.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9418788 9428265 - Pfkfb3 protein_coding retained_intron MGP_NODShiLtJ_T0052232.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9419088 9424821 - Pfkfb3 protein_coding processed_transcript MGP_NODShiLtJ_T0052233.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9419115 9427764 - Pfkfb3 protein_coding retained_intron MGP_NODShiLtJ_T0052234.1 MGP_NODShiLtJ_G0025181.1 mouse_genomes_project 2 9420384 9427331 - Pfkfb3 protein_coding processed_transcript MGP_NODShiLtJ_T0053232.1 MGP_NODShiLtJ_G0025359.1 mouse_genomes_project 2 28354852 28358704 - 1700007K13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053233.1 MGP_NODShiLtJ_G0025359.1 mouse_genomes_project 2 28354852 28359184 - MGP_NODShiLtJ_P0053233 1700007K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0053234.1 MGP_NODShiLtJ_G0025359.1 mouse_genomes_project 2 28355199 28359168 - MGP_NODShiLtJ_P0053234 1700007K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0013619.1 MGP_NODShiLtJ_G0011727.1 mouse_genomes_project 2 134721867 134722617 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055595.1 MGP_NODShiLtJ_G0025917.1 mouse_genomes_project 2 99681979 99682955 - MGP_NODShiLtJ_P0055595 Olfr1229 protein_coding protein_coding MGP_NODShiLtJ_T0057387.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147296481 147442472 - MGP_NODShiLtJ_P0057387 4930402H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057388.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147298082 147306795 - MGP_NODShiLtJ_P0057388 4930402H24Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057389.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147299550 147319842 - MGP_NODShiLtJ_P0057389 4930402H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057390.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147306704 147320109 - 4930402H24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0057391.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147327471 147330454 - 4930402H24Rik protein_coding retained_intron MGP_NODShiLtJ_T0057392.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147329950 147352622 - 4930402H24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0057393.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147329961 147367092 - MGP_NODShiLtJ_P0057393 4930402H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057394.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147340646 147442558 - 4930402H24Rik protein_coding retained_intron MGP_NODShiLtJ_T0057395.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147373609 147374687 - 4930402H24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0057396.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147373806 147410969 - 4930402H24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0057397.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147379545 147442537 - 4930402H24Rik protein_coding retained_intron MGP_NODShiLtJ_T0057398.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147404160 147414356 - 4930402H24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0057399.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147406118 147442571 - MGP_NODShiLtJ_P0057399 4930402H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057400.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147410936 147442563 - MGP_NODShiLtJ_P0057400 4930402H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057401.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147410971 147442560 - MGP_NODShiLtJ_P0057401 4930402H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057402.1 MGP_NODShiLtJ_G0026333.1 mouse_genomes_project 2 147412925 147514801 - MGP_NODShiLtJ_P0057402 4930402H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0017693.1 MGP_NODShiLtJ_G0015325.1 mouse_genomes_project 2 129616422 129669959 + Gm13972 processed_transcript processed_transcript MGP_NODShiLtJ_T0007367.1 MGP_NODShiLtJ_G0006034.1 mouse_genomes_project 2 192310231 192315148 + 1700007M16Rik lincRNA lincRNA MGP_NODShiLtJ_T0059342.1 MGP_NODShiLtJ_G0026793.1 mouse_genomes_project 2 199799590 199803917 - MGP_NODShiLtJ_P0059342 Ppp1r3d protein_coding protein_coding MGP_NODShiLtJ_T0059289.1 MGP_NODShiLtJ_G0026781.1 mouse_genomes_project 2 195459672 195472405 + MGP_NODShiLtJ_P0059289 Npepl1 protein_coding protein_coding MGP_NODShiLtJ_T0059290.1 MGP_NODShiLtJ_G0026781.1 mouse_genomes_project 2 195460477 195469715 + MGP_NODShiLtJ_P0059290 Npepl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059291.1 MGP_NODShiLtJ_G0026781.1 mouse_genomes_project 2 195460503 195472035 + Npepl1 protein_coding retained_intron MGP_NODShiLtJ_T0059292.1 MGP_NODShiLtJ_G0026781.1 mouse_genomes_project 2 195460896 195465426 + Npepl1 protein_coding retained_intron MGP_NODShiLtJ_T0052554.1 MGP_NODShiLtJ_G0025233.1 mouse_genomes_project 2 22292469 22341763 + MGP_NODShiLtJ_P0052554 Acbd5 protein_coding protein_coding MGP_NODShiLtJ_T0052555.1 MGP_NODShiLtJ_G0025233.1 mouse_genomes_project 2 22292502 22341763 + MGP_NODShiLtJ_P0052555 Acbd5 protein_coding protein_coding MGP_NODShiLtJ_T0052556.1 MGP_NODShiLtJ_G0025233.1 mouse_genomes_project 2 22292536 22300949 + MGP_NODShiLtJ_P0052556 Acbd5 protein_coding protein_coding MGP_NODShiLtJ_T0052557.1 MGP_NODShiLtJ_G0025233.1 mouse_genomes_project 2 22293369 22341761 + MGP_NODShiLtJ_P0052557 Acbd5 protein_coding protein_coding MGP_NODShiLtJ_T0052558.1 MGP_NODShiLtJ_G0025233.1 mouse_genomes_project 2 22293373 22341763 + MGP_NODShiLtJ_P0052558 Acbd5 protein_coding protein_coding MGP_NODShiLtJ_T0052559.1 MGP_NODShiLtJ_G0025233.1 mouse_genomes_project 2 22293628 22313263 + MGP_NODShiLtJ_P0052559 Acbd5 protein_coding protein_coding MGP_NODShiLtJ_T0052560.1 MGP_NODShiLtJ_G0025233.1 mouse_genomes_project 2 22293845 22342569 + MGP_NODShiLtJ_P0052560 Acbd5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013637.1 MGP_NODShiLtJ_G0011745.1 mouse_genomes_project 2 145032041 145032315 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055552.1 MGP_NODShiLtJ_G0025876.1 mouse_genomes_project 2 98304760 98305699 + MGP_NODShiLtJ_P0055552 Olfr1168 protein_coding protein_coding MGP_NODShiLtJ_T0057683.1 MGP_NODShiLtJ_G0026395.1 mouse_genomes_project 2 162201113 162229721 + MGP_NODShiLtJ_P0057683 Dstn protein_coding protein_coding MGP_NODShiLtJ_T0003848.1 MGP_NODShiLtJ_G0003437.1 mouse_genomes_project 2 12982544 13012251 - Gm13269 antisense antisense MGP_NODShiLtJ_T0003849.1 MGP_NODShiLtJ_G0003437.1 mouse_genomes_project 2 12982544 13015796 - Gm13269 antisense antisense MGP_NODShiLtJ_T0011416.1 MGP_NODShiLtJ_G0009549.1 mouse_genomes_project 2 195656296 195656418 + Gm27869 misc_RNA misc_RNA MGP_NODShiLtJ_T0003899.1 MGP_NODShiLtJ_G0003477.1 mouse_genomes_project 2 33766147 33768559 + Gm13536 antisense antisense MGP_NODShiLtJ_T0054883.1 MGP_NODShiLtJ_G0025647.1 mouse_genomes_project 2 77396589 77430432 + MGP_NODShiLtJ_P0054883 Erich2 protein_coding protein_coding MGP_NODShiLtJ_T0054884.1 MGP_NODShiLtJ_G0025647.1 mouse_genomes_project 2 77396601 77430432 + MGP_NODShiLtJ_P0054884 Erich2 protein_coding protein_coding MGP_NODShiLtJ_T0054885.1 MGP_NODShiLtJ_G0025647.1 mouse_genomes_project 2 77397230 77426690 + Erich2 protein_coding retained_intron MGP_NODShiLtJ_T0054886.1 MGP_NODShiLtJ_G0025647.1 mouse_genomes_project 2 77397230 77411751 + Erich2 protein_coding retained_intron MGP_NODShiLtJ_T0054887.1 MGP_NODShiLtJ_G0025647.1 mouse_genomes_project 2 77397267 77417087 + MGP_NODShiLtJ_P0054887 Erich2 protein_coding protein_coding MGP_NODShiLtJ_T0099112.1 MGP_NODShiLtJ_G0037506.1 mouse_genomes_project 2 78478929 78479033 + Gm23253 snRNA snRNA MGP_NODShiLtJ_T0007117.1 MGP_NODShiLtJ_G0005829.1 mouse_genomes_project 2 33816150 33829348 + Gm13530 lincRNA lincRNA MGP_NODShiLtJ_T0007112.1 MGP_NODShiLtJ_G0005825.1 mouse_genomes_project 2 30596133 30600354 + Gm14487 lincRNA lincRNA MGP_NODShiLtJ_T0059283.1 MGP_NODShiLtJ_G0026780.1 mouse_genomes_project 2 195422544 195439557 + MGP_NODShiLtJ_P0059283 Stx16 protein_coding protein_coding MGP_NODShiLtJ_T0059284.1 MGP_NODShiLtJ_G0026780.1 mouse_genomes_project 2 195422554 195437858 + MGP_NODShiLtJ_P0059284 Stx16 protein_coding protein_coding MGP_NODShiLtJ_T0059285.1 MGP_NODShiLtJ_G0026780.1 mouse_genomes_project 2 195422558 195440650 + MGP_NODShiLtJ_P0059285 Stx16 protein_coding protein_coding MGP_NODShiLtJ_T0059286.1 MGP_NODShiLtJ_G0026780.1 mouse_genomes_project 2 195423158 195446928 + MGP_NODShiLtJ_P0059286 Stx16 protein_coding protein_coding MGP_NODShiLtJ_T0059287.1 MGP_NODShiLtJ_G0026780.1 mouse_genomes_project 2 195423294 195446927 + MGP_NODShiLtJ_P0059287 Stx16 protein_coding protein_coding MGP_NODShiLtJ_T0059288.1 MGP_NODShiLtJ_G0026780.1 mouse_genomes_project 2 195423302 195444092 + MGP_NODShiLtJ_P0059288 Stx16 protein_coding protein_coding MGP_NODShiLtJ_T0013642.1 MGP_NODShiLtJ_G0011750.1 mouse_genomes_project 2 146633756 146635076 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007259.1 MGP_NODShiLtJ_G0005943.1 mouse_genomes_project 2 140265121 140275310 - 4930517E11Rik lincRNA lincRNA MGP_NODShiLtJ_T0100387.1 MGP_NODShiLtJ_G0038781.1 mouse_genomes_project 2 121589185 121589317 - Gm23439 snoRNA snoRNA MGP_NODShiLtJ_T0053207.1 MGP_NODShiLtJ_G0025353.1 mouse_genomes_project 2 27307888 27315566 + Wdr5 protein_coding processed_transcript MGP_NODShiLtJ_T0053208.1 MGP_NODShiLtJ_G0025353.1 mouse_genomes_project 2 27307888 27332193 + MGP_NODShiLtJ_P0053208 Wdr5 protein_coding protein_coding MGP_NODShiLtJ_T0053209.1 MGP_NODShiLtJ_G0025353.1 mouse_genomes_project 2 27314673 27330701 + MGP_NODShiLtJ_P0053209 Wdr5 protein_coding protein_coding MGP_NODShiLtJ_T0053210.1 MGP_NODShiLtJ_G0025353.1 mouse_genomes_project 2 27323816 27329013 + Wdr5 protein_coding processed_transcript MGP_NODShiLtJ_T0007261.1 MGP_NODShiLtJ_G0005945.1 mouse_genomes_project 2 140903439 140905868 + Gm13994 lincRNA lincRNA MGP_NODShiLtJ_T0053900.1 MGP_NODShiLtJ_G0025458.1 mouse_genomes_project 2 33012326 33014585 - 6330409D20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0053901.1 MGP_NODShiLtJ_G0025458.1 mouse_genomes_project 2 33012326 33021429 - MGP_NODShiLtJ_P0053901 6330409D20Rik protein_coding protein_coding MGP_NODShiLtJ_T0013417.1 MGP_NODShiLtJ_G0011525.1 mouse_genomes_project 2 55367353 55368456 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100420.1 MGP_NODShiLtJ_G0038814.1 mouse_genomes_project 2 178968019 178968151 + Gm25090 snoRNA snoRNA MGP_NODShiLtJ_T0059374.1 MGP_NODShiLtJ_G0026802.1 mouse_genomes_project 2 201601219 201606243 - MGP_NODShiLtJ_P0059374 Hrh3 protein_coding protein_coding MGP_NODShiLtJ_T0059375.1 MGP_NODShiLtJ_G0026802.1 mouse_genomes_project 2 201601405 201605906 - MGP_NODShiLtJ_P0059375 Hrh3 protein_coding protein_coding MGP_NODShiLtJ_T0059376.1 MGP_NODShiLtJ_G0026802.1 mouse_genomes_project 2 201601632 201605906 - MGP_NODShiLtJ_P0059376 Hrh3 protein_coding protein_coding MGP_NODShiLtJ_T0059377.1 MGP_NODShiLtJ_G0026802.1 mouse_genomes_project 2 201601632 201605906 - MGP_NODShiLtJ_P0059377 Hrh3 protein_coding protein_coding MGP_NODShiLtJ_T0059378.1 MGP_NODShiLtJ_G0026802.1 mouse_genomes_project 2 201602033 201605929 - MGP_NODShiLtJ_P0059378 Hrh3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059379.1 MGP_NODShiLtJ_G0026802.1 mouse_genomes_project 2 201602250 201605906 - MGP_NODShiLtJ_P0059379 Hrh3 protein_coding protein_coding MGP_NODShiLtJ_T0059380.1 MGP_NODShiLtJ_G0026802.1 mouse_genomes_project 2 201602250 201605906 - MGP_NODShiLtJ_P0059380 Hrh3 protein_coding protein_coding MGP_NODShiLtJ_T0059381.1 MGP_NODShiLtJ_G0026802.1 mouse_genomes_project 2 201602738 201605090 - Hrh3 protein_coding retained_intron MGP_NODShiLtJ_T0055364.1 MGP_NODShiLtJ_G0025743.1 mouse_genomes_project 2 93543450 93548048 + MGP_NODShiLtJ_P0055364 Ypel4 protein_coding protein_coding MGP_NODShiLtJ_T0055365.1 MGP_NODShiLtJ_G0025743.1 mouse_genomes_project 2 93543490 93548048 + MGP_NODShiLtJ_P0055365 Ypel4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055366.1 MGP_NODShiLtJ_G0025743.1 mouse_genomes_project 2 93543515 93545019 + Ypel4 protein_coding processed_transcript MGP_NODShiLtJ_T0055367.1 MGP_NODShiLtJ_G0025743.1 mouse_genomes_project 2 93543619 93548042 + Ypel4 protein_coding retained_intron MGP_NODShiLtJ_T0058170.1 MGP_NODShiLtJ_G0026537.1 mouse_genomes_project 2 173964389 173968448 + 1700003F12Rik protein_coding retained_intron MGP_NODShiLtJ_T0058172.1 MGP_NODShiLtJ_G0026537.1 mouse_genomes_project 2 173967517 173968633 + MGP_NODShiLtJ_P0058172 1700003F12Rik protein_coding protein_coding MGP_NODShiLtJ_T0058173.1 MGP_NODShiLtJ_G0026537.1 mouse_genomes_project 2 173967556 173968633 + MGP_NODShiLtJ_P0058173 1700003F12Rik protein_coding protein_coding MGP_NODShiLtJ_T0054821.1 MGP_NODShiLtJ_G0025634.1 mouse_genomes_project 2 76149583 76357684 - MGP_NODShiLtJ_P0054821 Lrp2 protein_coding protein_coding MGP_NODShiLtJ_T0054822.1 MGP_NODShiLtJ_G0025634.1 mouse_genomes_project 2 76234989 76357648 - MGP_NODShiLtJ_P0054822 Lrp2 protein_coding protein_coding MGP_NODShiLtJ_T0054823.1 MGP_NODShiLtJ_G0025634.1 mouse_genomes_project 2 76236408 76237932 - Lrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0054824.1 MGP_NODShiLtJ_G0025634.1 mouse_genomes_project 2 76257289 76357648 - MGP_NODShiLtJ_P0054824 Lrp2 protein_coding protein_coding MGP_NODShiLtJ_T0013457.1 MGP_NODShiLtJ_G0011565.1 mouse_genomes_project 2 71470566 71471575 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054271.1 MGP_NODShiLtJ_G0025540.1 mouse_genomes_project 2 39425386 39488064 - MGP_NODShiLtJ_P0054271 Psmb7 protein_coding protein_coding MGP_NODShiLtJ_T0054272.1 MGP_NODShiLtJ_G0025540.1 mouse_genomes_project 2 39450552 39487897 - Psmb7 protein_coding retained_intron MGP_NODShiLtJ_T0010379.1 MGP_NODShiLtJ_G0008512.1 mouse_genomes_project 2 188852326 188852404 - Gm24327 miRNA miRNA MGP_NODShiLtJ_T0013375.1 MGP_NODShiLtJ_G0011483.1 mouse_genomes_project 2 37560261 37560757 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101833.1 MGP_NODShiLtJ_G0040001.1 mouse_genomes_project 2 101041385 101042310 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0056618.1 MGP_NODShiLtJ_G0026169.1 mouse_genomes_project 2 135385779 135406164 + MGP_NODShiLtJ_P0056618 Tyro3 protein_coding protein_coding MGP_NODShiLtJ_T0056619.1 MGP_NODShiLtJ_G0026169.1 mouse_genomes_project 2 135387277 135393694 + Tyro3 protein_coding processed_transcript MGP_NODShiLtJ_T0056620.1 MGP_NODShiLtJ_G0026169.1 mouse_genomes_project 2 135387365 135391379 + Tyro3 protein_coding processed_transcript MGP_NODShiLtJ_T0056621.1 MGP_NODShiLtJ_G0026169.1 mouse_genomes_project 2 135387552 135406164 + MGP_NODShiLtJ_P0056621 Tyro3 protein_coding protein_coding MGP_NODShiLtJ_T0056622.1 MGP_NODShiLtJ_G0026169.1 mouse_genomes_project 2 135389151 135391337 + Tyro3 protein_coding processed_transcript MGP_NODShiLtJ_T0056623.1 MGP_NODShiLtJ_G0026169.1 mouse_genomes_project 2 135391130 135396037 + Tyro3 protein_coding retained_intron MGP_NODShiLtJ_T0056624.1 MGP_NODShiLtJ_G0026169.1 mouse_genomes_project 2 135397253 135406151 + Tyro3 protein_coding retained_intron MGP_NODShiLtJ_T0056625.1 MGP_NODShiLtJ_G0026169.1 mouse_genomes_project 2 135398889 135400435 + Tyro3 protein_coding retained_intron MGP_NODShiLtJ_T0007232.1 MGP_NODShiLtJ_G0005923.1 mouse_genomes_project 2 125453232 125460754 - Gm13942 lincRNA lincRNA MGP_NODShiLtJ_T0007213.1 MGP_NODShiLtJ_G0005907.1 mouse_genomes_project 2 106632063 106642063 + lincRNA lincRNA MGP_NODShiLtJ_T0055628.1 MGP_NODShiLtJ_G0025943.1 mouse_genomes_project 2 100641269 100644307 + MGP_NODShiLtJ_P0055628 Olfr1260 protein_coding protein_coding MGP_NODShiLtJ_T0055629.1 MGP_NODShiLtJ_G0025943.1 mouse_genomes_project 2 100641279 100643737 + MGP_NODShiLtJ_P0055629 Olfr1260 protein_coding protein_coding MGP_NODShiLtJ_T0055630.1 MGP_NODShiLtJ_G0025943.1 mouse_genomes_project 2 100641285 100643794 + Olfr1260 protein_coding processed_transcript MGP_NODShiLtJ_T0055631.1 MGP_NODShiLtJ_G0025943.1 mouse_genomes_project 2 100643374 100644307 + MGP_NODShiLtJ_P0055631 Olfr1260 protein_coding protein_coding MGP_NODShiLtJ_T0001051.1 MGP_NODShiLtJ_G0000977.1 mouse_genomes_project 2 39609096 39609760 - TEC TEC MGP_NODShiLtJ_T0004017.1 MGP_NODShiLtJ_G0003557.1 mouse_genomes_project 2 137641073 137642011 - Gm14019 antisense antisense MGP_NODShiLtJ_T0056333.1 MGP_NODShiLtJ_G0026084.1 mouse_genomes_project 2 126245101 126246040 - MGP_NODShiLtJ_P0056333 Olfr1297 protein_coding protein_coding MGP_NODShiLtJ_T0053163.1 MGP_NODShiLtJ_G0025345.1 mouse_genomes_project 2 26784751 26791311 - Slc2a6 protein_coding processed_transcript MGP_NODShiLtJ_T0053164.1 MGP_NODShiLtJ_G0025345.1 mouse_genomes_project 2 26784751 26791335 - Slc2a6 protein_coding processed_transcript MGP_NODShiLtJ_T0053165.1 MGP_NODShiLtJ_G0025345.1 mouse_genomes_project 2 26784751 26791298 - MGP_NODShiLtJ_P0053165 Slc2a6 protein_coding protein_coding MGP_NODShiLtJ_T0053166.1 MGP_NODShiLtJ_G0025345.1 mouse_genomes_project 2 26784751 26791387 - MGP_NODShiLtJ_P0053166 Slc2a6 protein_coding protein_coding MGP_NODShiLtJ_T0053167.1 MGP_NODShiLtJ_G0025345.1 mouse_genomes_project 2 26787456 26789380 - Slc2a6 protein_coding processed_transcript MGP_NODShiLtJ_T0053168.1 MGP_NODShiLtJ_G0025345.1 mouse_genomes_project 2 26789476 26791380 - MGP_NODShiLtJ_P0053168 Slc2a6 protein_coding protein_coding MGP_NODShiLtJ_T0052292.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10365386 10449163 - Fam188a protein_coding processed_transcript MGP_NODShiLtJ_T0052293.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10365386 10449163 - MGP_NODShiLtJ_P0052293 Fam188a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052294.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10365386 10449150 - MGP_NODShiLtJ_P0052294 Fam188a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052295.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10365386 10449185 - MGP_NODShiLtJ_P0052295 Fam188a protein_coding protein_coding MGP_NODShiLtJ_T0052296.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10365386 10449159 - MGP_NODShiLtJ_P0052296 Fam188a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052297.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10365389 10449167 - MGP_NODShiLtJ_P0052297 Fam188a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052298.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10365734 10374961 - MGP_NODShiLtJ_P0052298 Fam188a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052299.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10366020 10424516 - Fam188a protein_coding retained_intron MGP_NODShiLtJ_T0052300.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10366068 10449003 - Fam188a protein_coding processed_transcript MGP_NODShiLtJ_T0052301.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10369032 10449125 - MGP_NODShiLtJ_P0052301 Fam188a protein_coding protein_coding MGP_NODShiLtJ_T0052302.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10374834 10449146 - Fam188a protein_coding retained_intron MGP_NODShiLtJ_T0052303.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10382425 10384270 - Fam188a protein_coding retained_intron MGP_NODShiLtJ_T0052304.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10382594 10449164 - MGP_NODShiLtJ_P0052304 Fam188a protein_coding protein_coding MGP_NODShiLtJ_T0052305.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10407830 10408665 - Fam188a protein_coding retained_intron MGP_NODShiLtJ_T0052306.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10408531 10436439 - MGP_NODShiLtJ_P0052306 Fam188a protein_coding protein_coding MGP_NODShiLtJ_T0052307.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10427079 10449156 - Fam188a protein_coding retained_intron MGP_NODShiLtJ_T0052308.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10427464 10436578 - Fam188a protein_coding retained_intron MGP_NODShiLtJ_T0052309.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10428479 10449106 - MGP_NODShiLtJ_P0052309 Fam188a protein_coding protein_coding MGP_NODShiLtJ_T0052310.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10428490 10448964 - MGP_NODShiLtJ_P0052310 Fam188a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052311.1 MGP_NODShiLtJ_G0025189.1 mouse_genomes_project 2 10431418 10432150 - Fam188a protein_coding processed_transcript MGP_NODShiLtJ_T0054220.1 MGP_NODShiLtJ_G0025531.1 mouse_genomes_project 2 38147833 38154148 - MGP_NODShiLtJ_P0054220 Zbtb6 protein_coding protein_coding MGP_NODShiLtJ_T0054221.1 MGP_NODShiLtJ_G0025531.1 mouse_genomes_project 2 38147836 38166671 - MGP_NODShiLtJ_P0054221 Zbtb6 protein_coding protein_coding MGP_NODShiLtJ_T0053562.1 MGP_NODShiLtJ_G0025408.1 mouse_genomes_project 2 30529300 30533394 - MGP_NODShiLtJ_P0053562 Ier5l protein_coding protein_coding MGP_NODShiLtJ_T0007155.1 MGP_NODShiLtJ_G0005860.1 mouse_genomes_project 2 68056042 68060305 - Gm13565 lincRNA lincRNA MGP_NODShiLtJ_T0059424.1 MGP_NODShiLtJ_G0026813.1 mouse_genomes_project 2 202121454 202128046 + MGP_NODShiLtJ_P0059424 Ogfr protein_coding protein_coding MGP_NODShiLtJ_T0059425.1 MGP_NODShiLtJ_G0026813.1 mouse_genomes_project 2 202121671 202126059 + Ogfr protein_coding retained_intron MGP_NODShiLtJ_T0013424.1 MGP_NODShiLtJ_G0011532.1 mouse_genomes_project 2 57385252 57386231 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013405.1 MGP_NODShiLtJ_G0011513.1 mouse_genomes_project 2 51698664 51698916 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007111.1 MGP_NODShiLtJ_G0005824.1 mouse_genomes_project 2 28171484 28183298 - Gm13373 lincRNA lincRNA MGP_NODShiLtJ_T0004093.1 MGP_NODShiLtJ_G0003616.1 mouse_genomes_project 2 182530611 182533741 + Ptprtos antisense antisense MGP_NODShiLtJ_T0100368.1 MGP_NODShiLtJ_G0038762.1 mouse_genomes_project 2 58819521 58819660 - Gm24549 snoRNA snoRNA MGP_NODShiLtJ_T0004022.1 MGP_NODShiLtJ_G0003562.1 mouse_genomes_project 2 144109024 144119039 + Gm14244 antisense antisense MGP_NODShiLtJ_T0059593.1 MGP_NODShiLtJ_G0026843.1 mouse_genomes_project 2 203130565 203168687 + MGP_NODShiLtJ_P0059593 Dnajc5 protein_coding protein_coding MGP_NODShiLtJ_T0059594.1 MGP_NODShiLtJ_G0026843.1 mouse_genomes_project 2 203130606 203165788 + MGP_NODShiLtJ_P0059594 Dnajc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059595.1 MGP_NODShiLtJ_G0026843.1 mouse_genomes_project 2 203130631 203165786 + MGP_NODShiLtJ_P0059595 Dnajc5 protein_coding protein_coding MGP_NODShiLtJ_T0059596.1 MGP_NODShiLtJ_G0026843.1 mouse_genomes_project 2 203130892 203162326 + MGP_NODShiLtJ_P0059596 Dnajc5 protein_coding protein_coding MGP_NODShiLtJ_T0059597.1 MGP_NODShiLtJ_G0026843.1 mouse_genomes_project 2 203131027 203163144 + MGP_NODShiLtJ_P0059597 Dnajc5 protein_coding protein_coding MGP_NODShiLtJ_T0059598.1 MGP_NODShiLtJ_G0026843.1 mouse_genomes_project 2 203162879 203163812 + Dnajc5 protein_coding processed_transcript MGP_NODShiLtJ_T0057981.1 MGP_NODShiLtJ_G0026476.1 mouse_genomes_project 2 171504127 171512040 - MGP_NODShiLtJ_P0057981 Nrsn2 protein_coding protein_coding MGP_NODShiLtJ_T0004130.1 MGP_NODShiLtJ_G0003642.1 mouse_genomes_project 2 194542624 194544355 + Pmepa1os antisense antisense MGP_NODShiLtJ_T0004082.1 MGP_NODShiLtJ_G0003605.1 mouse_genomes_project 2 175122321 175124956 + Gssos1 antisense antisense MGP_NODShiLtJ_T0054204.1 MGP_NODShiLtJ_G0025525.1 mouse_genomes_project 2 37784102 37785056 - MGP_NODShiLtJ_P0054204 Olfr362 protein_coding protein_coding MGP_NODShiLtJ_T0052845.1 MGP_NODShiLtJ_G0025286.1 mouse_genomes_project 2 25120711 25122550 + Clic3 protein_coding processed_transcript MGP_NODShiLtJ_T0052846.1 MGP_NODShiLtJ_G0025286.1 mouse_genomes_project 2 25120711 25122650 + MGP_NODShiLtJ_P0052846 Clic3 protein_coding protein_coding MGP_NODShiLtJ_T0052847.1 MGP_NODShiLtJ_G0025286.1 mouse_genomes_project 2 25120722 25122650 + MGP_NODShiLtJ_P0052847 Clic3 protein_coding protein_coding MGP_NODShiLtJ_T0052848.1 MGP_NODShiLtJ_G0025286.1 mouse_genomes_project 2 25120764 25122650 + Clic3 protein_coding processed_transcript MGP_NODShiLtJ_T0052849.1 MGP_NODShiLtJ_G0025286.1 mouse_genomes_project 2 25120770 25122557 + Clic3 protein_coding processed_transcript MGP_NODShiLtJ_T0052850.1 MGP_NODShiLtJ_G0025286.1 mouse_genomes_project 2 25121509 25122089 + Clic3 protein_coding processed_transcript MGP_NODShiLtJ_T0011379.1 MGP_NODShiLtJ_G0009512.1 mouse_genomes_project 2 20276420 20276597 - Gm23007 misc_RNA misc_RNA MGP_NODShiLtJ_T0058223.1 MGP_NODShiLtJ_G0026550.1 mouse_genomes_project 2 174732373 174746980 + Dynlrb1 protein_coding processed_transcript MGP_NODShiLtJ_T0058224.1 MGP_NODShiLtJ_G0026550.1 mouse_genomes_project 2 174732375 174746985 + MGP_NODShiLtJ_P0058224 Dynlrb1 protein_coding protein_coding MGP_NODShiLtJ_T0058225.1 MGP_NODShiLtJ_G0026550.1 mouse_genomes_project 2 174732448 174746843 + MGP_NODShiLtJ_P0058225 Dynlrb1 protein_coding protein_coding MGP_NODShiLtJ_T0058226.1 MGP_NODShiLtJ_G0026550.1 mouse_genomes_project 2 174732651 174746788 + Dynlrb1 protein_coding processed_transcript MGP_NODShiLtJ_T0004035.1 MGP_NODShiLtJ_G0003570.1 mouse_genomes_project 2 148246979 148248545 + Gm14285 antisense antisense MGP_NODShiLtJ_T0099143.1 MGP_NODShiLtJ_G0037537.1 mouse_genomes_project 2 182974106 182974264 - Gm24478 snRNA snRNA MGP_NODShiLtJ_T0057225.1 MGP_NODShiLtJ_G0026289.1 mouse_genomes_project 2 144902198 144903452 + MGP_NODShiLtJ_P0057225 protein_coding protein_coding MGP_NODShiLtJ_T0013530.1 MGP_NODShiLtJ_G0011638.1 mouse_genomes_project 2 97048267 97048682 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056208.1 MGP_NODShiLtJ_G0026048.1 mouse_genomes_project 2 118334975 118343939 - Eif3m protein_coding retained_intron MGP_NODShiLtJ_T0056209.1 MGP_NODShiLtJ_G0026048.1 mouse_genomes_project 2 118334975 118354783 - MGP_NODShiLtJ_P0056209 Eif3m protein_coding protein_coding MGP_NODShiLtJ_T0056210.1 MGP_NODShiLtJ_G0026048.1 mouse_genomes_project 2 118334978 118343491 - MGP_NODShiLtJ_P0056210 Eif3m protein_coding protein_coding MGP_NODShiLtJ_T0056211.1 MGP_NODShiLtJ_G0026048.1 mouse_genomes_project 2 118335008 118354746 - MGP_NODShiLtJ_P0056211 Eif3m protein_coding protein_coding MGP_NODShiLtJ_T0007349.1 MGP_NODShiLtJ_G0006018.1 mouse_genomes_project 2 188949261 188951172 - E130018N17Rik lincRNA lincRNA MGP_NODShiLtJ_T0013473.1 MGP_NODShiLtJ_G0011581.1 mouse_genomes_project 2 77512053 77512302 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003900.1 MGP_NODShiLtJ_G0003478.1 mouse_genomes_project 2 33970619 33972020 + C130021I20Rik antisense antisense MGP_NODShiLtJ_T0003901.1 MGP_NODShiLtJ_G0003478.1 mouse_genomes_project 2 33970757 33975785 + C130021I20Rik antisense antisense MGP_NODShiLtJ_T0007237.1 MGP_NODShiLtJ_G0005928.1 mouse_genomes_project 2 130485044 130506583 - 4930528P14Rik lincRNA lincRNA MGP_NODShiLtJ_T0013462.1 MGP_NODShiLtJ_G0011570.1 mouse_genomes_project 2 73254973 73256487 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053281.1 MGP_NODShiLtJ_G0025369.1 mouse_genomes_project 2 28626805 28746499 + MGP_NODShiLtJ_P0053281 Ak8 protein_coding protein_coding MGP_NODShiLtJ_T0053282.1 MGP_NODShiLtJ_G0025369.1 mouse_genomes_project 2 28626832 28744290 + MGP_NODShiLtJ_P0053282 Ak8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053283.1 MGP_NODShiLtJ_G0025369.1 mouse_genomes_project 2 28626848 28662566 + Ak8 protein_coding processed_transcript MGP_NODShiLtJ_T0053284.1 MGP_NODShiLtJ_G0025369.1 mouse_genomes_project 2 28670371 28688262 + Ak8 protein_coding processed_transcript MGP_NODShiLtJ_T0055257.1 MGP_NODShiLtJ_G0025722.1 mouse_genomes_project 2 88356977 88472521 - MGP_NODShiLtJ_P0055257 Nckap1 protein_coding protein_coding MGP_NODShiLtJ_T0055258.1 MGP_NODShiLtJ_G0025722.1 mouse_genomes_project 2 88356983 88472637 - MGP_NODShiLtJ_P0055258 Nckap1 protein_coding protein_coding MGP_NODShiLtJ_T0055259.1 MGP_NODShiLtJ_G0025722.1 mouse_genomes_project 2 88388983 88408377 - Nckap1 protein_coding processed_transcript MGP_NODShiLtJ_T0055260.1 MGP_NODShiLtJ_G0025722.1 mouse_genomes_project 2 88432138 88442099 - Nckap1 protein_coding processed_transcript MGP_NODShiLtJ_T0055261.1 MGP_NODShiLtJ_G0025722.1 mouse_genomes_project 2 88435963 88441819 - Nckap1 protein_coding processed_transcript MGP_NODShiLtJ_T0099094.1 MGP_NODShiLtJ_G0037488.1 mouse_genomes_project 2 24631513 24631620 - Gm25518 snRNA snRNA MGP_NODShiLtJ_T0003921.1 MGP_NODShiLtJ_G0003493.1 mouse_genomes_project 2 63487841 63499828 + Gm13544 antisense antisense MGP_NODShiLtJ_T0055402.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93871698 93881602 + MGP_NODShiLtJ_P0055402 Ssrp1 protein_coding protein_coding MGP_NODShiLtJ_T0055403.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93871915 93881599 + MGP_NODShiLtJ_P0055403 Ssrp1 protein_coding protein_coding MGP_NODShiLtJ_T0055404.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93871917 93873738 + Ssrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055405.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93871919 93880265 + MGP_NODShiLtJ_P0055405 Ssrp1 protein_coding protein_coding MGP_NODShiLtJ_T0055406.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93871997 93874922 + Ssrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055407.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93874578 93875489 + Ssrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055408.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93875640 93876791 + Ssrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055409.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93879743 93881211 + Ssrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055410.1 MGP_NODShiLtJ_G0025755.1 mouse_genomes_project 2 93879847 93880778 + Ssrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055431.1 MGP_NODShiLtJ_G0025767.1 mouse_genomes_project 2 94649980 94650922 + MGP_NODShiLtJ_P0055431 Olfr1008 protein_coding protein_coding MGP_NODShiLtJ_T0054424.1 MGP_NODShiLtJ_G0025562.1 mouse_genomes_project 2 53939691 53957204 - Mmadhc protein_coding processed_transcript MGP_NODShiLtJ_T0054425.1 MGP_NODShiLtJ_G0025562.1 mouse_genomes_project 2 53939691 53957226 - MGP_NODShiLtJ_P0054425 Mmadhc protein_coding protein_coding MGP_NODShiLtJ_T0054426.1 MGP_NODShiLtJ_G0025562.1 mouse_genomes_project 2 53940160 53957196 - Mmadhc protein_coding processed_transcript MGP_NODShiLtJ_T0054427.1 MGP_NODShiLtJ_G0025562.1 mouse_genomes_project 2 53940951 53957190 - MGP_NODShiLtJ_P0054427 Mmadhc protein_coding protein_coding MGP_NODShiLtJ_T0054428.1 MGP_NODShiLtJ_G0025562.1 mouse_genomes_project 2 53940964 53956932 - Mmadhc protein_coding processed_transcript MGP_NODShiLtJ_T0054429.1 MGP_NODShiLtJ_G0025562.1 mouse_genomes_project 2 53940976 53949738 - Mmadhc protein_coding processed_transcript MGP_NODShiLtJ_T0054430.1 MGP_NODShiLtJ_G0025562.1 mouse_genomes_project 2 53948391 53957185 - Mmadhc protein_coding processed_transcript MGP_NODShiLtJ_T0054431.1 MGP_NODShiLtJ_G0025562.1 mouse_genomes_project 2 53948404 53957310 - MGP_NODShiLtJ_P0054431 Mmadhc protein_coding protein_coding MGP_NODShiLtJ_T0055575.1 MGP_NODShiLtJ_G0025898.1 mouse_genomes_project 2 99255746 99256679 - MGP_NODShiLtJ_P0055575 Olfr1209 protein_coding protein_coding MGP_NODShiLtJ_T0013547.1 MGP_NODShiLtJ_G0011655.1 mouse_genomes_project 2 102566977 102567215 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056751.1 MGP_NODShiLtJ_G0026188.1 mouse_genomes_project 2 136300891 136355309 + MGP_NODShiLtJ_P0056751 protein_coding protein_coding MGP_NODShiLtJ_T0056752.1 MGP_NODShiLtJ_G0026188.1 mouse_genomes_project 2 136300989 136393229 + MGP_NODShiLtJ_P0056752 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056753.1 MGP_NODShiLtJ_G0026188.1 mouse_genomes_project 2 136300989 136393472 + MGP_NODShiLtJ_P0056753 protein_coding protein_coding MGP_NODShiLtJ_T0056754.1 MGP_NODShiLtJ_G0026188.1 mouse_genomes_project 2 136358944 136393472 + MGP_NODShiLtJ_P0056754 protein_coding protein_coding MGP_NODShiLtJ_T0056755.1 MGP_NODShiLtJ_G0026188.1 mouse_genomes_project 2 136376492 136393222 + MGP_NODShiLtJ_P0056755 protein_coding protein_coding MGP_NODShiLtJ_T0056756.1 MGP_NODShiLtJ_G0026188.1 mouse_genomes_project 2 136379743 136409992 + MGP_NODShiLtJ_P0056756 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056757.1 MGP_NODShiLtJ_G0026188.1 mouse_genomes_project 2 136391103 136393270 + protein_coding retained_intron MGP_NODShiLtJ_T0056758.1 MGP_NODShiLtJ_G0026188.1 mouse_genomes_project 2 136392657 136407462 + protein_coding processed_transcript MGP_NODShiLtJ_T0013766.1 MGP_NODShiLtJ_G0011874.1 mouse_genomes_project 2 203360687 203361588 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055277.1 MGP_NODShiLtJ_G0025728.1 mouse_genomes_project 2 92256130 92277173 + MGP_NODShiLtJ_P0055277 Zc3h15 protein_coding protein_coding MGP_NODShiLtJ_T0055278.1 MGP_NODShiLtJ_G0025728.1 mouse_genomes_project 2 92256176 92271447 + Zc3h15 protein_coding processed_transcript MGP_NODShiLtJ_T0055279.1 MGP_NODShiLtJ_G0025728.1 mouse_genomes_project 2 92256232 92265247 + Zc3h15 protein_coding processed_transcript MGP_NODShiLtJ_T0055280.1 MGP_NODShiLtJ_G0025728.1 mouse_genomes_project 2 92256318 92273298 + Zc3h15 protein_coding processed_transcript MGP_NODShiLtJ_T0055281.1 MGP_NODShiLtJ_G0025728.1 mouse_genomes_project 2 92256348 92278979 + MGP_NODShiLtJ_P0055281 Zc3h15 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055282.1 MGP_NODShiLtJ_G0025728.1 mouse_genomes_project 2 92269763 92271211 + Zc3h15 protein_coding processed_transcript MGP_NODShiLtJ_T0055283.1 MGP_NODShiLtJ_G0025728.1 mouse_genomes_project 2 92270256 92276292 + Zc3h15 protein_coding processed_transcript MGP_NODShiLtJ_T0056460.1 MGP_NODShiLtJ_G0026130.1 mouse_genomes_project 2 133871536 133911375 + MGP_NODShiLtJ_P0056460 Eif2ak4 protein_coding protein_coding MGP_NODShiLtJ_T0056461.1 MGP_NODShiLtJ_G0026130.1 mouse_genomes_project 2 133871627 133959165 + MGP_NODShiLtJ_P0056461 Eif2ak4 protein_coding protein_coding MGP_NODShiLtJ_T0056462.1 MGP_NODShiLtJ_G0026130.1 mouse_genomes_project 2 133871765 133959339 + MGP_NODShiLtJ_P0056462 Eif2ak4 protein_coding protein_coding MGP_NODShiLtJ_T0056463.1 MGP_NODShiLtJ_G0026130.1 mouse_genomes_project 2 133872030 133959337 + MGP_NODShiLtJ_P0056463 Eif2ak4 protein_coding protein_coding MGP_NODShiLtJ_T0056464.1 MGP_NODShiLtJ_G0026130.1 mouse_genomes_project 2 133872030 133959336 + MGP_NODShiLtJ_P0056464 Eif2ak4 protein_coding protein_coding MGP_NODShiLtJ_T0056465.1 MGP_NODShiLtJ_G0026130.1 mouse_genomes_project 2 133922147 133935618 + MGP_NODShiLtJ_P0056465 Eif2ak4 protein_coding protein_coding MGP_NODShiLtJ_T0056466.1 MGP_NODShiLtJ_G0026130.1 mouse_genomes_project 2 133940446 133946171 + Eif2ak4 protein_coding processed_transcript MGP_NODShiLtJ_T0058060.1 MGP_NODShiLtJ_G0026506.1 mouse_genomes_project 2 172317444 172362644 + MGP_NODShiLtJ_P0058060 Hck protein_coding protein_coding MGP_NODShiLtJ_T0058061.1 MGP_NODShiLtJ_G0026506.1 mouse_genomes_project 2 172317444 172362646 + MGP_NODShiLtJ_P0058061 Hck protein_coding protein_coding MGP_NODShiLtJ_T0052388.1 MGP_NODShiLtJ_G0025206.1 mouse_genomes_project 2 14895857 15371049 + MGP_NODShiLtJ_P0052388 Plxdc2 protein_coding protein_coding MGP_NODShiLtJ_T0052389.1 MGP_NODShiLtJ_G0025206.1 mouse_genomes_project 2 14896440 15366899 + MGP_NODShiLtJ_P0052389 Plxdc2 protein_coding protein_coding MGP_NODShiLtJ_T0052390.1 MGP_NODShiLtJ_G0025206.1 mouse_genomes_project 2 14896670 15367067 + MGP_NODShiLtJ_P0052390 Plxdc2 protein_coding protein_coding MGP_NODShiLtJ_T0052391.1 MGP_NODShiLtJ_G0025206.1 mouse_genomes_project 2 15221689 15366900 + Plxdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0013293.1 MGP_NODShiLtJ_G0011401.1 mouse_genomes_project 2 2042915 2043140 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007301.1 MGP_NODShiLtJ_G0005978.1 mouse_genomes_project 2 170178366 170361454 + lincRNA lincRNA MGP_NODShiLtJ_T0007302.1 MGP_NODShiLtJ_G0005978.1 mouse_genomes_project 2 170178479 170361439 + lincRNA lincRNA MGP_NODShiLtJ_T0059155.1 MGP_NODShiLtJ_G0026743.1 mouse_genomes_project 2 189031125 189033135 + MGP_NODShiLtJ_P0059155 Mocs3 protein_coding protein_coding MGP_NODShiLtJ_T0057982.1 MGP_NODShiLtJ_G0026477.1 mouse_genomes_project 2 171533622 171538194 - MGP_NODShiLtJ_P0057982 Sox12 protein_coding protein_coding MGP_NODShiLtJ_T0057983.1 MGP_NODShiLtJ_G0026477.1 mouse_genomes_project 2 171533625 171538177 - MGP_NODShiLtJ_P0057983 Sox12 protein_coding protein_coding MGP_NODShiLtJ_T0007334.1 MGP_NODShiLtJ_G0006007.1 mouse_genomes_project 2 186811379 186840864 + Gm11468 lincRNA lincRNA MGP_NODShiLtJ_T0007191.1 MGP_NODShiLtJ_G0005890.1 mouse_genomes_project 2 85808441 85901670 + Gm14461 lincRNA lincRNA MGP_NODShiLtJ_T0007192.1 MGP_NODShiLtJ_G0005890.1 mouse_genomes_project 2 85901131 85901440 + Gm14461 lincRNA lincRNA MGP_NODShiLtJ_T0055498.1 MGP_NODShiLtJ_G0025833.1 mouse_genomes_project 2 97052811 97053735 + MGP_NODShiLtJ_P0055498 Olfr1118 protein_coding protein_coding MGP_NODShiLtJ_T0098189.1 MGP_NODShiLtJ_G0036601.1 mouse_genomes_project 2 55311042 55311172 - Gm23505 scaRNA scaRNA MGP_NODShiLtJ_T0058296.1 MGP_NODShiLtJ_G0026564.1 mouse_genomes_project 2 175360795 175362483 - MGP_NODShiLtJ_P0058296 BC029722 protein_coding protein_coding MGP_NODShiLtJ_T0004084.1 MGP_NODShiLtJ_G0003607.1 mouse_genomes_project 2 175369675 175370839 + Gm16098 antisense antisense MGP_NODShiLtJ_T0013354.1 MGP_NODShiLtJ_G0011462.1 mouse_genomes_project 2 26304053 26304622 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055432.1 MGP_NODShiLtJ_G0025768.1 mouse_genomes_project 2 94694062 94695007 + MGP_NODShiLtJ_P0055432 Olfr1009 protein_coding protein_coding MGP_NODShiLtJ_T0057804.1 MGP_NODShiLtJ_G0026420.1 mouse_genomes_project 2 165696291 165705644 - MGP_NODShiLtJ_P0057804 Nkx2-2 protein_coding protein_coding MGP_NODShiLtJ_T0057805.1 MGP_NODShiLtJ_G0026420.1 mouse_genomes_project 2 165701729 165705948 - MGP_NODShiLtJ_P0057805 Nkx2-2 protein_coding protein_coding MGP_NODShiLtJ_T0057806.1 MGP_NODShiLtJ_G0026420.1 mouse_genomes_project 2 165705848 165715002 - Nkx2-2 protein_coding processed_transcript MGP_NODShiLtJ_T0057807.1 MGP_NODShiLtJ_G0026420.1 mouse_genomes_project 2 165705925 165715001 - Nkx2-2 protein_coding processed_transcript MGP_NODShiLtJ_T0056439.1 MGP_NODShiLtJ_G0026123.1 mouse_genomes_project 2 132194241 132207688 + MGP_NODShiLtJ_P0056439 Tmco5 protein_coding protein_coding MGP_NODShiLtJ_T0056440.1 MGP_NODShiLtJ_G0026123.1 mouse_genomes_project 2 132194244 132207644 + MGP_NODShiLtJ_P0056440 Tmco5 protein_coding protein_coding MGP_NODShiLtJ_T0056441.1 MGP_NODShiLtJ_G0026123.1 mouse_genomes_project 2 132194258 132208001 + MGP_NODShiLtJ_P0056441 Tmco5 protein_coding protein_coding MGP_NODShiLtJ_T0056442.1 MGP_NODShiLtJ_G0026123.1 mouse_genomes_project 2 132203697 132208001 + Tmco5 protein_coding processed_transcript MGP_NODShiLtJ_T0057887.1 MGP_NODShiLtJ_G0026453.1 mouse_genomes_project 2 169858646 169885766 + Gins1 protein_coding processed_transcript MGP_NODShiLtJ_T0057888.1 MGP_NODShiLtJ_G0026453.1 mouse_genomes_project 2 169867645 169891141 + MGP_NODShiLtJ_P0057888 Gins1 protein_coding protein_coding MGP_NODShiLtJ_T0057889.1 MGP_NODShiLtJ_G0026453.1 mouse_genomes_project 2 169867668 169885960 + Gins1 protein_coding processed_transcript MGP_NODShiLtJ_T0057890.1 MGP_NODShiLtJ_G0026453.1 mouse_genomes_project 2 169872415 169887403 + Gins1 protein_coding processed_transcript MGP_NODShiLtJ_T0010346.1 MGP_NODShiLtJ_G0008479.1 mouse_genomes_project 2 136676565 136676642 - Gm44325 miRNA miRNA MGP_NODShiLtJ_T0057248.1 MGP_NODShiLtJ_G0026294.1 mouse_genomes_project 2 145327465 145364228 + MGP_NODShiLtJ_P0057248 Fbln7 protein_coding protein_coding MGP_NODShiLtJ_T0057249.1 MGP_NODShiLtJ_G0026294.1 mouse_genomes_project 2 145328410 145364224 + MGP_NODShiLtJ_P0057249 Fbln7 protein_coding protein_coding MGP_NODShiLtJ_T0003842.1 MGP_NODShiLtJ_G0003432.1 mouse_genomes_project 2 7728200 7736690 + Gm13262 antisense antisense MGP_NODShiLtJ_T0058614.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178183706 178277964 + MGP_NODShiLtJ_P0058614 Ralgapb protein_coding protein_coding MGP_NODShiLtJ_T0058615.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178183711 178277964 + MGP_NODShiLtJ_P0058615 Ralgapb protein_coding protein_coding MGP_NODShiLtJ_T0058616.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178183734 178202977 + Ralgapb protein_coding retained_intron MGP_NODShiLtJ_T0058617.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178183737 178215262 + Ralgapb protein_coding retained_intron MGP_NODShiLtJ_T0058618.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178183740 178219638 + Ralgapb protein_coding processed_transcript MGP_NODShiLtJ_T0058619.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178183809 178276371 + MGP_NODShiLtJ_P0058619 Ralgapb protein_coding protein_coding MGP_NODShiLtJ_T0058620.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178183960 178194726 + MGP_NODShiLtJ_P0058620 Ralgapb protein_coding protein_coding MGP_NODShiLtJ_T0058621.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178212169 178277964 + MGP_NODShiLtJ_P0058621 Ralgapb protein_coding protein_coding MGP_NODShiLtJ_T0058622.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178243225 178252400 + Ralgapb protein_coding retained_intron MGP_NODShiLtJ_T0058623.1 MGP_NODShiLtJ_G0026614.1 mouse_genomes_project 2 178256707 178263689 + Ralgapb protein_coding processed_transcript MGP_NODShiLtJ_T0056341.1 MGP_NODShiLtJ_G0026092.1 mouse_genomes_project 2 126701934 126702897 - MGP_NODShiLtJ_P0056341 Olfr1309 protein_coding protein_coding MGP_NODShiLtJ_T0098305.1 MGP_NODShiLtJ_G0036711.1 mouse_genomes_project 2 63951955 63977438 + Gm13558 sense_intronic sense_intronic MGP_NODShiLtJ_T0058400.1 MGP_NODShiLtJ_G0026578.1 mouse_genomes_project 2 175682703 175708767 - MGP_NODShiLtJ_P0058400 Nfs1 protein_coding protein_coding MGP_NODShiLtJ_T0058401.1 MGP_NODShiLtJ_G0026578.1 mouse_genomes_project 2 175682714 175704673 - MGP_NODShiLtJ_P0058401 Nfs1 protein_coding protein_coding MGP_NODShiLtJ_T0058402.1 MGP_NODShiLtJ_G0026578.1 mouse_genomes_project 2 175703350 175708734 - Nfs1 protein_coding retained_intron MGP_NODShiLtJ_T0058403.1 MGP_NODShiLtJ_G0026578.1 mouse_genomes_project 2 175706495 175708761 - MGP_NODShiLtJ_P0058403 Nfs1 protein_coding protein_coding MGP_NODShiLtJ_T0054184.1 MGP_NODShiLtJ_G0025507.1 mouse_genomes_project 2 37133817 37134747 + MGP_NODShiLtJ_P0054184 Olfr344 protein_coding protein_coding MGP_NODShiLtJ_T0101837.1 MGP_NODShiLtJ_G0040005.1 mouse_genomes_project 2 123577291 123601872 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013485.1 MGP_NODShiLtJ_G0011593.1 mouse_genomes_project 2 81004480 81004744 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055564.1 MGP_NODShiLtJ_G0025887.1 mouse_genomes_project 2 98849411 98850624 + MGP_NODShiLtJ_P0055564 Olfr1193 protein_coding protein_coding MGP_NODShiLtJ_T0054324.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 41731983 44638220 - MGP_NODShiLtJ_P0054324 protein_coding protein_coding MGP_NODShiLtJ_T0054325.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 41732269 41939052 - MGP_NODShiLtJ_P0054325 protein_coding protein_coding MGP_NODShiLtJ_T0054326.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 41736553 42104446 - MGP_NODShiLtJ_P0054326 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054327.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 41747195 41866221 - MGP_NODShiLtJ_P0054327 protein_coding protein_coding MGP_NODShiLtJ_T0054328.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 41894571 41935930 - protein_coding retained_intron MGP_NODShiLtJ_T0054329.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 42081359 43420533 - MGP_NODShiLtJ_P0054329 protein_coding protein_coding MGP_NODShiLtJ_T0054330.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 42718361 44637652 - MGP_NODShiLtJ_P0054330 protein_coding protein_coding MGP_NODShiLtJ_T0054331.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 43031966 44637668 - protein_coding retained_intron MGP_NODShiLtJ_T0054332.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 43843657 44637521 - MGP_NODShiLtJ_P0054332 protein_coding protein_coding MGP_NODShiLtJ_T0054333.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 44165808 44637851 - protein_coding retained_intron MGP_NODShiLtJ_T0054334.1 MGP_NODShiLtJ_G0025550.1 mouse_genomes_project 2 44634477 44637610 - MGP_NODShiLtJ_P0054334 protein_coding protein_coding MGP_NODShiLtJ_T0017623.1 MGP_NODShiLtJ_G0015285.1 mouse_genomes_project 2 36722360 36724269 + Gm13429 processed_transcript processed_transcript MGP_NODShiLtJ_T0017624.1 MGP_NODShiLtJ_G0015285.1 mouse_genomes_project 2 36722831 36732904 + Gm13429 processed_transcript processed_transcript MGP_NODShiLtJ_T0017625.1 MGP_NODShiLtJ_G0015285.1 mouse_genomes_project 2 36730772 36732903 + Gm13429 processed_transcript processed_transcript MGP_NODShiLtJ_T0053285.1 MGP_NODShiLtJ_G0025370.1 mouse_genomes_project 2 28756618 28776192 - MGP_NODShiLtJ_P0053285 Gtf3c4 protein_coding protein_coding MGP_NODShiLtJ_T0053286.1 MGP_NODShiLtJ_G0025370.1 mouse_genomes_project 2 28756624 28776118 - MGP_NODShiLtJ_P0053286 Gtf3c4 protein_coding protein_coding MGP_NODShiLtJ_T0053287.1 MGP_NODShiLtJ_G0025370.1 mouse_genomes_project 2 28771035 28776118 - Gtf3c4 protein_coding processed_transcript MGP_NODShiLtJ_T0053288.1 MGP_NODShiLtJ_G0025370.1 mouse_genomes_project 2 28771135 28776184 - Gtf3c4 protein_coding processed_transcript MGP_NODShiLtJ_T0052583.1 MGP_NODShiLtJ_G0025241.1 mouse_genomes_project 2 23631932 23645689 + MGP_NODShiLtJ_P0052583 Il1f8 protein_coding protein_coding MGP_NODShiLtJ_T0004002.1 MGP_NODShiLtJ_G0003546.1 mouse_genomes_project 2 128398406 128401763 - Gm13964 antisense antisense MGP_NODShiLtJ_T0003986.1 MGP_NODShiLtJ_G0003538.1 mouse_genomes_project 2 115852520 115861373 - Gm13872 antisense antisense MGP_NODShiLtJ_T0003987.1 MGP_NODShiLtJ_G0003538.1 mouse_genomes_project 2 115858264 115861360 - Gm13872 antisense antisense MGP_NODShiLtJ_T0003988.1 MGP_NODShiLtJ_G0003538.1 mouse_genomes_project 2 115859251 115861374 - Gm13872 antisense antisense MGP_NODShiLtJ_T0013612.1 MGP_NODShiLtJ_G0011720.1 mouse_genomes_project 2 128266186 128266711 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013563.1 MGP_NODShiLtJ_G0011671.1 mouse_genomes_project 2 110617179 110617351 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053418.1 MGP_NODShiLtJ_G0025388.1 mouse_genomes_project 2 30057553 30077564 - MGP_NODShiLtJ_P0053418 Wdr34 protein_coding protein_coding MGP_NODShiLtJ_T0053419.1 MGP_NODShiLtJ_G0025388.1 mouse_genomes_project 2 30057919 30058513 - Wdr34 protein_coding retained_intron MGP_NODShiLtJ_T0053420.1 MGP_NODShiLtJ_G0025388.1 mouse_genomes_project 2 30059801 30061054 - Wdr34 protein_coding retained_intron MGP_NODShiLtJ_T0053421.1 MGP_NODShiLtJ_G0025388.1 mouse_genomes_project 2 30075860 30077544 - Wdr34 protein_coding processed_transcript MGP_NODShiLtJ_T0057169.1 MGP_NODShiLtJ_G0026274.1 mouse_genomes_project 2 143738186 143757165 + MGP_NODShiLtJ_P0057169 Astl protein_coding protein_coding MGP_NODShiLtJ_T0057170.1 MGP_NODShiLtJ_G0026274.1 mouse_genomes_project 2 143741157 143757164 + MGP_NODShiLtJ_P0057170 Astl protein_coding protein_coding MGP_NODShiLtJ_T0057171.1 MGP_NODShiLtJ_G0026274.1 mouse_genomes_project 2 143741171 143757163 + MGP_NODShiLtJ_P0057171 Astl protein_coding protein_coding MGP_NODShiLtJ_T0057172.1 MGP_NODShiLtJ_G0026274.1 mouse_genomes_project 2 143741445 143749690 + MGP_NODShiLtJ_P0057172 Astl protein_coding protein_coding MGP_NODShiLtJ_T0007227.1 MGP_NODShiLtJ_G0005918.1 mouse_genomes_project 2 119469379 119471407 - Gm29053 lincRNA lincRNA MGP_NODShiLtJ_T0099138.1 MGP_NODShiLtJ_G0037532.1 mouse_genomes_project 2 158227822 158227929 - Gm23846 snRNA snRNA MGP_NODShiLtJ_T0054656.1 MGP_NODShiLtJ_G0025603.1 mouse_genomes_project 2 67285279 67286904 + Tbr1 protein_coding processed_transcript MGP_NODShiLtJ_T0054657.1 MGP_NODShiLtJ_G0025603.1 mouse_genomes_project 2 67286798 67297624 + MGP_NODShiLtJ_P0054657 Tbr1 protein_coding protein_coding MGP_NODShiLtJ_T0054658.1 MGP_NODShiLtJ_G0025603.1 mouse_genomes_project 2 67288607 67296041 + MGP_NODShiLtJ_P0054658 Tbr1 protein_coding protein_coding MGP_NODShiLtJ_T0054659.1 MGP_NODShiLtJ_G0025603.1 mouse_genomes_project 2 67288618 67295311 + Tbr1 protein_coding processed_transcript MGP_NODShiLtJ_T0011417.1 MGP_NODShiLtJ_G0009550.1 mouse_genomes_project 2 195656562 195656687 + Gm27849 misc_RNA misc_RNA MGP_NODShiLtJ_T0007229.1 MGP_NODShiLtJ_G0005920.1 mouse_genomes_project 2 120061062 120067111 - Gm14014 lincRNA lincRNA MGP_NODShiLtJ_T0052425.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16953783 16982163 - MGP_NODShiLtJ_P0052425 Dnajc1 protein_coding protein_coding MGP_NODShiLtJ_T0052426.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16965911 17209238 - MGP_NODShiLtJ_P0052426 Dnajc1 protein_coding protein_coding MGP_NODShiLtJ_T0052427.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16968807 16979508 - Dnajc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052428.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16976354 17209257 - MGP_NODShiLtJ_P0052428 Dnajc1 protein_coding protein_coding MGP_NODShiLtJ_T0052429.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16979740 17209069 - MGP_NODShiLtJ_P0052429 Dnajc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052430.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16979740 17208847 - MGP_NODShiLtJ_P0052430 Dnajc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052431.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16979760 17208848 - MGP_NODShiLtJ_P0052431 Dnajc1 protein_coding protein_coding MGP_NODShiLtJ_T0052432.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16979862 17208927 - MGP_NODShiLtJ_P0052432 Dnajc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052433.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 16982136 17099014 - MGP_NODShiLtJ_P0052433 Dnajc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052434.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 17098708 17102355 - Dnajc1 protein_coding retained_intron MGP_NODShiLtJ_T0052435.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 17100681 17209251 - Dnajc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052436.1 MGP_NODShiLtJ_G0025212.1 mouse_genomes_project 2 17110624 17209257 - Dnajc1 protein_coding retained_intron MGP_NODShiLtJ_T0013543.1 MGP_NODShiLtJ_G0011651.1 mouse_genomes_project 2 101876127 101876472 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013350.1 MGP_NODShiLtJ_G0011458.1 mouse_genomes_project 2 24257516 24258162 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055492.1 MGP_NODShiLtJ_G0025827.1 mouse_genomes_project 2 96716816 96717755 - MGP_NODShiLtJ_P0055492 Olfr259 protein_coding protein_coding MGP_NODShiLtJ_T0000999.1 MGP_NODShiLtJ_G0000925.1 mouse_genomes_project 2 7425060 7425756 - TEC TEC MGP_NODShiLtJ_T0100392.1 MGP_NODShiLtJ_G0038786.1 mouse_genomes_project 2 136705594 136705808 + Gm22865 snoRNA snoRNA MGP_NODShiLtJ_T0003952.1 MGP_NODShiLtJ_G0003516.1 mouse_genomes_project 2 80098424 80108480 + Sp3os antisense antisense MGP_NODShiLtJ_T0003953.1 MGP_NODShiLtJ_G0003516.1 mouse_genomes_project 2 80098424 80108245 + Sp3os antisense antisense MGP_NODShiLtJ_T0003954.1 MGP_NODShiLtJ_G0003516.1 mouse_genomes_project 2 80098516 80108349 + Sp3os antisense antisense MGP_NODShiLtJ_T0003955.1 MGP_NODShiLtJ_G0003516.1 mouse_genomes_project 2 80107043 80108410 + Sp3os antisense antisense MGP_NODShiLtJ_T0058582.1 MGP_NODShiLtJ_G0026607.1 mouse_genomes_project 2 177730694 177778263 - MGP_NODShiLtJ_P0058582 Tti1 protein_coding protein_coding MGP_NODShiLtJ_T0058583.1 MGP_NODShiLtJ_G0026607.1 mouse_genomes_project 2 177730703 177758224 - MGP_NODShiLtJ_P0058583 Tti1 protein_coding protein_coding MGP_NODShiLtJ_T0058584.1 MGP_NODShiLtJ_G0026607.1 mouse_genomes_project 2 177744170 177756074 - Tti1 protein_coding processed_transcript MGP_NODShiLtJ_T0058585.1 MGP_NODShiLtJ_G0026607.1 mouse_genomes_project 2 177757631 177761084 - MGP_NODShiLtJ_P0058585 Tti1 protein_coding protein_coding MGP_NODShiLtJ_T0052934.1 MGP_NODShiLtJ_G0025303.1 mouse_genomes_project 2 25359515 25362878 + MGP_NODShiLtJ_P0052934 Lcn10 protein_coding protein_coding MGP_NODShiLtJ_T0056647.1 MGP_NODShiLtJ_G0026172.1 mouse_genomes_project 2 135640864 135645834 + MGP_NODShiLtJ_P0056647 Jmjd7 protein_coding protein_coding MGP_NODShiLtJ_T0056649.1 MGP_NODShiLtJ_G0026172.1 mouse_genomes_project 2 135640885 135643778 + MGP_NODShiLtJ_P0056649 Jmjd7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056652.1 MGP_NODShiLtJ_G0026172.1 mouse_genomes_project 2 135640897 135645116 + Jmjd7 protein_coding processed_transcript MGP_NODShiLtJ_T0056653.1 MGP_NODShiLtJ_G0026172.1 mouse_genomes_project 2 135640938 135644633 + Jmjd7 protein_coding processed_transcript MGP_NODShiLtJ_T0056654.1 MGP_NODShiLtJ_G0026172.1 mouse_genomes_project 2 135640975 135643625 + MGP_NODShiLtJ_P0056654 Jmjd7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056201.1 MGP_NODShiLtJ_G0026045.1 mouse_genomes_project 2 118039615 118110701 - MGP_NODShiLtJ_P0056201 Qser1 protein_coding protein_coding MGP_NODShiLtJ_T0013317.1 MGP_NODShiLtJ_G0011425.1 mouse_genomes_project 2 13677119 13678089 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007234.1 MGP_NODShiLtJ_G0005925.1 mouse_genomes_project 2 129839307 130108786 + lincRNA lincRNA MGP_NODShiLtJ_T0052010.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 395847 433395 + MGP_NODShiLtJ_P0052010 Dclre1c protein_coding protein_coding MGP_NODShiLtJ_T0052011.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 395847 436405 + MGP_NODShiLtJ_P0052011 Dclre1c protein_coding protein_coding MGP_NODShiLtJ_T0052012.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 395866 409445 + Dclre1c protein_coding processed_transcript MGP_NODShiLtJ_T0052013.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 395866 426370 + MGP_NODShiLtJ_P0052013 Dclre1c protein_coding protein_coding MGP_NODShiLtJ_T0052014.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 395881 409483 + Dclre1c protein_coding processed_transcript MGP_NODShiLtJ_T0052015.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 395881 433387 + MGP_NODShiLtJ_P0052015 Dclre1c protein_coding protein_coding MGP_NODShiLtJ_T0052016.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 395918 414484 + Dclre1c protein_coding retained_intron MGP_NODShiLtJ_T0052017.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 413106 431205 + MGP_NODShiLtJ_P0052017 Dclre1c protein_coding protein_coding MGP_NODShiLtJ_T0052018.1 MGP_NODShiLtJ_G0025146.1 mouse_genomes_project 2 425226 426145 + Dclre1c protein_coding processed_transcript MGP_NODShiLtJ_T0011407.1 MGP_NODShiLtJ_G0009540.1 mouse_genomes_project 2 165773568 165773892 - Gm22261 misc_RNA misc_RNA MGP_NODShiLtJ_T0098306.1 MGP_NODShiLtJ_G0036712.1 mouse_genomes_project 2 129948102 129949121 + Gm28492 sense_intronic sense_intronic MGP_NODShiLtJ_T0056338.1 MGP_NODShiLtJ_G0026089.1 mouse_genomes_project 2 126600723 126601662 - MGP_NODShiLtJ_P0056338 Olfr1305 protein_coding protein_coding MGP_NODShiLtJ_T0058073.1 MGP_NODShiLtJ_G0026509.1 mouse_genomes_project 2 172448757 172466020 - MGP_NODShiLtJ_P0058073 Plagl2 protein_coding protein_coding MGP_NODShiLtJ_T0058074.1 MGP_NODShiLtJ_G0026509.1 mouse_genomes_project 2 172448770 172461078 - MGP_NODShiLtJ_P0058074 Plagl2 protein_coding protein_coding MGP_NODShiLtJ_T0003958.1 MGP_NODShiLtJ_G0003519.1 mouse_genomes_project 2 80590823 80598057 + Gm13707 antisense antisense MGP_NODShiLtJ_T0055141.1 MGP_NODShiLtJ_G0025706.1 mouse_genomes_project 2 84114335 84135843 + MGP_NODShiLtJ_P0055141 Plekha3 protein_coding protein_coding MGP_NODShiLtJ_T0055142.1 MGP_NODShiLtJ_G0025706.1 mouse_genomes_project 2 84128868 84131779 + Plekha3 protein_coding processed_transcript MGP_NODShiLtJ_T0057635.1 MGP_NODShiLtJ_G0026382.1 mouse_genomes_project 2 157303668 157400885 + MGP_NODShiLtJ_P0057635 Ism1 protein_coding protein_coding MGP_NODShiLtJ_T0057636.1 MGP_NODShiLtJ_G0026382.1 mouse_genomes_project 2 157303668 157400886 + MGP_NODShiLtJ_P0057636 Ism1 protein_coding protein_coding MGP_NODShiLtJ_T0007253.1 MGP_NODShiLtJ_G0005939.1 mouse_genomes_project 2 133580810 133581407 - Gm29233 lincRNA lincRNA MGP_NODShiLtJ_T0056804.1 MGP_NODShiLtJ_G0026197.1 mouse_genomes_project 2 136835136 136846970 - MGP_NODShiLtJ_P0056804 Lcmt2 protein_coding protein_coding MGP_NODShiLtJ_T0056805.1 MGP_NODShiLtJ_G0026197.1 mouse_genomes_project 2 136844189 136847245 - MGP_NODShiLtJ_P0056805 Lcmt2 protein_coding protein_coding MGP_NODShiLtJ_T0055075.1 MGP_NODShiLtJ_G0025680.1 mouse_genomes_project 2 81748173 81764687 - Lnpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0055076.1 MGP_NODShiLtJ_G0025680.1 mouse_genomes_project 2 81749165 81846727 - Lnpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0055077.1 MGP_NODShiLtJ_G0025680.1 mouse_genomes_project 2 81751166 81785620 - MGP_NODShiLtJ_P0055077 Lnpk1 protein_coding protein_coding MGP_NODShiLtJ_T0055078.1 MGP_NODShiLtJ_G0025680.1 mouse_genomes_project 2 81789835 81790269 - Lnpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0013343.1 MGP_NODShiLtJ_G0011451.1 mouse_genomes_project 2 22215173 22215710 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055487.1 MGP_NODShiLtJ_G0025822.1 mouse_genomes_project 2 96569149 96570082 - MGP_NODShiLtJ_P0055487 Olfr1104 protein_coding protein_coding MGP_NODShiLtJ_T0010269.1 MGP_NODShiLtJ_G0008402.1 mouse_genomes_project 2 8366103 8366230 + Mir669i miRNA miRNA MGP_NODShiLtJ_T0100347.1 MGP_NODShiLtJ_G0038741.1 mouse_genomes_project 2 26386907 26387034 - Snora43 snoRNA snoRNA MGP_NODShiLtJ_T0100343.1 MGP_NODShiLtJ_G0038737.1 mouse_genomes_project 2 18912560 18912651 + Gm25859 snoRNA snoRNA MGP_NODShiLtJ_T0010389.1 MGP_NODShiLtJ_G0008522.1 mouse_genomes_project 2 201769341 201769417 + Mir3091 miRNA miRNA MGP_NODShiLtJ_T0057702.1 MGP_NODShiLtJ_G0026399.1 mouse_genomes_project 2 162574186 162584030 + MGP_NODShiLtJ_P0057702 Mgme1 protein_coding protein_coding MGP_NODShiLtJ_T0057703.1 MGP_NODShiLtJ_G0026399.1 mouse_genomes_project 2 162574423 162584741 + MGP_NODShiLtJ_P0057703 Mgme1 protein_coding protein_coding MGP_NODShiLtJ_T0057704.1 MGP_NODShiLtJ_G0026399.1 mouse_genomes_project 2 162574464 162584030 + MGP_NODShiLtJ_P0057704 Mgme1 protein_coding protein_coding MGP_NODShiLtJ_T0055861.1 MGP_NODShiLtJ_G0025982.1 mouse_genomes_project 2 102876178 102877618 + MGP_NODShiLtJ_P0055861 Chrm4 protein_coding protein_coding MGP_NODShiLtJ_T0007328.1 MGP_NODShiLtJ_G0006001.1 mouse_genomes_project 2 184862049 184871239 + Gm14317 lincRNA lincRNA MGP_NODShiLtJ_T0055577.1 MGP_NODShiLtJ_G0025900.1 mouse_genomes_project 2 99331342 99332278 + MGP_NODShiLtJ_P0055577 Olfr1212 protein_coding protein_coding MGP_NODShiLtJ_T0007333.1 MGP_NODShiLtJ_G0006006.1 mouse_genomes_project 2 186732842 186734240 - Gm11467 lincRNA lincRNA MGP_NODShiLtJ_T0052814.1 MGP_NODShiLtJ_G0025281.1 mouse_genomes_project 2 25049843 25055299 + MGP_NODShiLtJ_P0052814 Entpd2 protein_coding protein_coding MGP_NODShiLtJ_T0052815.1 MGP_NODShiLtJ_G0025281.1 mouse_genomes_project 2 25049885 25055270 + Entpd2 protein_coding processed_transcript MGP_NODShiLtJ_T0052816.1 MGP_NODShiLtJ_G0025281.1 mouse_genomes_project 2 25052722 25053821 + Entpd2 protein_coding processed_transcript MGP_NODShiLtJ_T0013670.1 MGP_NODShiLtJ_G0011778.1 mouse_genomes_project 2 159935986 159936374 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054752.1 MGP_NODShiLtJ_G0025618.1 mouse_genomes_project 2 72358503 72405859 - MGP_NODShiLtJ_P0054752 Galnt3 protein_coding protein_coding MGP_NODShiLtJ_T0054753.1 MGP_NODShiLtJ_G0025618.1 mouse_genomes_project 2 72361018 72372956 - Galnt3 protein_coding processed_transcript MGP_NODShiLtJ_T0054754.1 MGP_NODShiLtJ_G0025618.1 mouse_genomes_project 2 72368895 72371803 - Galnt3 protein_coding processed_transcript MGP_NODShiLtJ_T0054755.1 MGP_NODShiLtJ_G0025618.1 mouse_genomes_project 2 72373372 72380238 - Galnt3 protein_coding processed_transcript MGP_NODShiLtJ_T0003895.1 MGP_NODShiLtJ_G0003473.1 mouse_genomes_project 2 32457659 32461260 - Gm13610 antisense antisense MGP_NODShiLtJ_T0056189.1 MGP_NODShiLtJ_G0026042.1 mouse_genomes_project 2 117935564 117961977 - Tcp11l1 protein_coding processed_transcript MGP_NODShiLtJ_T0056192.1 MGP_NODShiLtJ_G0026042.1 mouse_genomes_project 2 117955669 117992422 - MGP_NODShiLtJ_P0056192 Tcp11l1 protein_coding protein_coding MGP_NODShiLtJ_T0056193.1 MGP_NODShiLtJ_G0026042.1 mouse_genomes_project 2 117957631 117992428 - MGP_NODShiLtJ_P0056193 Tcp11l1 protein_coding protein_coding MGP_NODShiLtJ_T0056194.1 MGP_NODShiLtJ_G0026042.1 mouse_genomes_project 2 117962489 117992435 - Tcp11l1 protein_coding retained_intron MGP_NODShiLtJ_T0056195.1 MGP_NODShiLtJ_G0026042.1 mouse_genomes_project 2 117977947 117986802 - Tcp11l1 protein_coding processed_transcript MGP_NODShiLtJ_T0056196.1 MGP_NODShiLtJ_G0026042.1 mouse_genomes_project 2 117979491 117992359 - Tcp11l1 protein_coding processed_transcript MGP_NODShiLtJ_T0056197.1 MGP_NODShiLtJ_G0026042.1 mouse_genomes_project 2 117985284 117992432 - Tcp11l1 protein_coding processed_transcript MGP_NODShiLtJ_T0058285.1 MGP_NODShiLtJ_G0026560.1 mouse_genomes_project 2 175235715 175264001 - MGP_NODShiLtJ_P0058285 Edem2 protein_coding protein_coding MGP_NODShiLtJ_T0058286.1 MGP_NODShiLtJ_G0026560.1 mouse_genomes_project 2 175239761 175247327 - Edem2 protein_coding processed_transcript MGP_NODShiLtJ_T0058287.1 MGP_NODShiLtJ_G0026560.1 mouse_genomes_project 2 175242598 175245001 - Edem2 protein_coding retained_intron MGP_NODShiLtJ_T0058288.1 MGP_NODShiLtJ_G0026560.1 mouse_genomes_project 2 175243014 175250389 - Edem2 protein_coding retained_intron MGP_NODShiLtJ_T0099122.1 MGP_NODShiLtJ_G0037516.1 mouse_genomes_project 2 124400220 124400327 + Gm22997 snRNA snRNA MGP_NODShiLtJ_T0010348.1 MGP_NODShiLtJ_G0008481.1 mouse_genomes_project 2 137830018 137830086 + Gm27325 miRNA miRNA MGP_NODShiLtJ_T0053457.1 MGP_NODShiLtJ_G0025394.1 mouse_genomes_project 2 30217748 30220325 + MGP_NODShiLtJ_P0053457 Endog protein_coding protein_coding MGP_NODShiLtJ_T0013664.1 MGP_NODShiLtJ_G0011772.1 mouse_genomes_project 2 156957672 156958181 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053772.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545343 32602018 - MGP_NODShiLtJ_P0053772 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053773.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545343 32601970 - MGP_NODShiLtJ_P0053773 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053774.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545343 32601963 - MGP_NODShiLtJ_P0053774 Dnm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053775.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545343 32601982 - MGP_NODShiLtJ_P0053775 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053776.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545343 32601943 - MGP_NODShiLtJ_P0053776 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053777.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545343 32601964 - MGP_NODShiLtJ_P0053777 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053778.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545350 32601914 - MGP_NODShiLtJ_P0053778 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053779.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545369 32565053 - MGP_NODShiLtJ_P0053779 Dnm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053780.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545713 32601950 - MGP_NODShiLtJ_P0053780 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053781.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32545796 32547508 - Dnm1 protein_coding retained_intron MGP_NODShiLtJ_T0053782.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32546347 32549796 - MGP_NODShiLtJ_P0053782 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053783.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32546351 32601982 - MGP_NODShiLtJ_P0053783 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053784.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32546722 32549766 - MGP_NODShiLtJ_P0053784 Dnm1 protein_coding protein_coding MGP_NODShiLtJ_T0053785.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32547135 32549762 - MGP_NODShiLtJ_P0053785 Dnm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053786.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32549099 32561815 - Dnm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053787.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32549114 32549950 - Dnm1 protein_coding retained_intron MGP_NODShiLtJ_T0053788.1 MGP_NODShiLtJ_G0025440.1 mouse_genomes_project 2 32588700 32601931 - MGP_NODShiLtJ_P0053788 Dnm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013665.1 MGP_NODShiLtJ_G0011773.1 mouse_genomes_project 2 157518050 157518478 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054187.1 MGP_NODShiLtJ_G0025510.1 mouse_genomes_project 2 37348399 37349338 + MGP_NODShiLtJ_P0054187 Olfr347 protein_coding protein_coding MGP_NODShiLtJ_T0013716.1 MGP_NODShiLtJ_G0011824.1 mouse_genomes_project 2 175923589 175924136 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057709.1 MGP_NODShiLtJ_G0026402.1 mouse_genomes_project 2 162685484 162690205 + MGP_NODShiLtJ_P0057709 Pet117 protein_coding protein_coding MGP_NODShiLtJ_T0057985.1 MGP_NODShiLtJ_G0026479.1 mouse_genomes_project 2 171558487 171589966 + MGP_NODShiLtJ_P0057985 6820408C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0057986.1 MGP_NODShiLtJ_G0026479.1 mouse_genomes_project 2 171573536 171589965 + MGP_NODShiLtJ_P0057986 6820408C15Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057987.1 MGP_NODShiLtJ_G0026479.1 mouse_genomes_project 2 171573563 171585257 + MGP_NODShiLtJ_P0057987 6820408C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0013709.1 MGP_NODShiLtJ_G0011817.1 mouse_genomes_project 2 174686448 174687077 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013701.1 MGP_NODShiLtJ_G0011809.1 mouse_genomes_project 2 170910649 170911787 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013553.1 MGP_NODShiLtJ_G0011661.1 mouse_genomes_project 2 104894488 104894999 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052200.1 MGP_NODShiLtJ_G0025178.1 mouse_genomes_project 2 7988445 8087339 + MGP_NODShiLtJ_P0052200 Itih5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053235.1 MGP_NODShiLtJ_G0025360.1 mouse_genomes_project 2 28360917 28364030 + MGP_NODShiLtJ_P0053235 Mrps2 protein_coding protein_coding MGP_NODShiLtJ_T0053236.1 MGP_NODShiLtJ_G0025360.1 mouse_genomes_project 2 28360933 28364017 + Mrps2 protein_coding processed_transcript MGP_NODShiLtJ_T0053237.1 MGP_NODShiLtJ_G0025360.1 mouse_genomes_project 2 28360941 28364017 + Mrps2 protein_coding processed_transcript MGP_NODShiLtJ_T0051993.1 MGP_NODShiLtJ_G0025140.1 mouse_genomes_project 2 64782 186466 + MGP_NODShiLtJ_P0051993 Fam171a1 protein_coding protein_coding MGP_NODShiLtJ_T0051994.1 MGP_NODShiLtJ_G0025140.1 mouse_genomes_project 2 64911 186463 + MGP_NODShiLtJ_P0051994 Fam171a1 protein_coding protein_coding MGP_NODShiLtJ_T0054866.1 MGP_NODShiLtJ_G0025643.1 mouse_genomes_project 2 76700328 76717429 - MGP_NODShiLtJ_P0054866 Mettl5 protein_coding protein_coding MGP_NODShiLtJ_T0054867.1 MGP_NODShiLtJ_G0025643.1 mouse_genomes_project 2 76700344 76717411 - MGP_NODShiLtJ_P0054867 Mettl5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054868.1 MGP_NODShiLtJ_G0025643.1 mouse_genomes_project 2 76709513 76717418 - Mettl5 protein_coding retained_intron MGP_NODShiLtJ_T0052707.1 MGP_NODShiLtJ_G0025260.1 mouse_genomes_project 2 24830587 24834508 - MGP_NODShiLtJ_P0052707 Tor4a protein_coding protein_coding MGP_NODShiLtJ_T0052708.1 MGP_NODShiLtJ_G0025260.1 mouse_genomes_project 2 24832678 24834381 - MGP_NODShiLtJ_P0052708 Tor4a protein_coding protein_coding MGP_NODShiLtJ_T0052709.1 MGP_NODShiLtJ_G0025260.1 mouse_genomes_project 2 24833413 24834393 - MGP_NODShiLtJ_P0052709 Tor4a protein_coding protein_coding MGP_NODShiLtJ_T0058988.1 MGP_NODShiLtJ_G0026710.1 mouse_genomes_project 2 185794940 185808926 - MGP_NODShiLtJ_P0058988 Zfp334 protein_coding protein_coding MGP_NODShiLtJ_T0017620.1 MGP_NODShiLtJ_G0015283.1 mouse_genomes_project 2 35355216 35359451 + Gm13448 processed_transcript processed_transcript MGP_NODShiLtJ_T0059616.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203200802 203212773 - MGP_NODShiLtJ_P0059616 Zfp512b protein_coding protein_coding MGP_NODShiLtJ_T0059617.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203200804 203210890 - MGP_NODShiLtJ_P0059617 Zfp512b protein_coding protein_coding MGP_NODShiLtJ_T0059618.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203203285 203205099 - Zfp512b protein_coding retained_intron MGP_NODShiLtJ_T0059619.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203203873 203205005 - MGP_NODShiLtJ_P0059619 Zfp512b protein_coding protein_coding MGP_NODShiLtJ_T0059620.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203203879 203205057 - MGP_NODShiLtJ_P0059620 Zfp512b protein_coding protein_coding MGP_NODShiLtJ_T0059621.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203205416 203207616 - Zfp512b protein_coding retained_intron MGP_NODShiLtJ_T0059622.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203205812 203208710 - MGP_NODShiLtJ_P0059622 Zfp512b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059623.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203208036 203209257 - Zfp512b protein_coding processed_transcript MGP_NODShiLtJ_T0059624.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203209993 203212728 - Zfp512b protein_coding processed_transcript MGP_NODShiLtJ_T0059625.1 MGP_NODShiLtJ_G0026845.1 mouse_genomes_project 2 203210492 203212773 - MGP_NODShiLtJ_P0059625 Zfp512b protein_coding protein_coding MGP_NODShiLtJ_T0001012.1 MGP_NODShiLtJ_G0000938.1 mouse_genomes_project 2 10411471 10416815 - TEC TEC MGP_NODShiLtJ_T0055833.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102575209 102599089 + MGP_NODShiLtJ_P0055833 Arhgap1 protein_coding protein_coding MGP_NODShiLtJ_T0055834.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102575467 102599089 + MGP_NODShiLtJ_P0055834 Arhgap1 protein_coding protein_coding MGP_NODShiLtJ_T0055835.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102575571 102599089 + MGP_NODShiLtJ_P0055835 Arhgap1 protein_coding protein_coding MGP_NODShiLtJ_T0055836.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102576847 102579880 + Arhgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0055837.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102576847 102579882 + Arhgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0055838.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102577096 102593568 + Arhgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0055839.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102578557 102599065 + MGP_NODShiLtJ_P0055839 Arhgap1 protein_coding protein_coding MGP_NODShiLtJ_T0055840.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102593775 102598124 + Arhgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0055841.1 MGP_NODShiLtJ_G0025978.1 mouse_genomes_project 2 102595190 102596307 + Arhgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0099146.1 MGP_NODShiLtJ_G0037540.1 mouse_genomes_project 2 187360455 187360558 + Gm24477 snRNA snRNA MGP_NODShiLtJ_T0058408.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175711814 175745825 - MGP_NODShiLtJ_P0058408 Rbm39 protein_coding protein_coding MGP_NODShiLtJ_T0058409.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175711821 175745167 - MGP_NODShiLtJ_P0058409 Rbm39 protein_coding protein_coding MGP_NODShiLtJ_T0058410.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175711824 175745754 - MGP_NODShiLtJ_P0058410 Rbm39 protein_coding protein_coding MGP_NODShiLtJ_T0058411.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175711824 175745736 - MGP_NODShiLtJ_P0058411 Rbm39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058412.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175712515 175745771 - MGP_NODShiLtJ_P0058412 Rbm39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058413.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175712515 175745763 - MGP_NODShiLtJ_P0058413 Rbm39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058414.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175713810 175729232 - MGP_NODShiLtJ_P0058414 Rbm39 protein_coding protein_coding MGP_NODShiLtJ_T0058415.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175726281 175745729 - MGP_NODShiLtJ_P0058415 Rbm39 protein_coding protein_coding MGP_NODShiLtJ_T0058416.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175726283 175729521 - Rbm39 protein_coding retained_intron MGP_NODShiLtJ_T0058417.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175727265 175734667 - Rbm39 protein_coding processed_transcript MGP_NODShiLtJ_T0058418.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175728295 175733578 - Rbm39 protein_coding retained_intron MGP_NODShiLtJ_T0058419.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175729114 175745746 - MGP_NODShiLtJ_P0058419 Rbm39 protein_coding protein_coding MGP_NODShiLtJ_T0058420.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175729228 175738529 - Rbm39 protein_coding processed_transcript MGP_NODShiLtJ_T0058421.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175732968 175743318 - Rbm39 protein_coding retained_intron MGP_NODShiLtJ_T0058422.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175735263 175742967 - Rbm39 protein_coding processed_transcript MGP_NODShiLtJ_T0058423.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175738400 175745748 - MGP_NODShiLtJ_P0058423 Rbm39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058424.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175738499 175745734 - MGP_NODShiLtJ_P0058424 Rbm39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058425.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175738521 175743488 - Rbm39 protein_coding retained_intron MGP_NODShiLtJ_T0058426.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175740270 175745499 - MGP_NODShiLtJ_P0058426 Rbm39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058427.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175740274 175745743 - MGP_NODShiLtJ_P0058427 Rbm39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058428.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175740359 175745825 - MGP_NODShiLtJ_P0058428 Rbm39 protein_coding protein_coding MGP_NODShiLtJ_T0058429.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175742744 175745783 - Rbm39 protein_coding retained_intron MGP_NODShiLtJ_T0058430.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175742944 175745736 - MGP_NODShiLtJ_P0058430 Rbm39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058431.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175744145 175745799 - Rbm39 protein_coding retained_intron MGP_NODShiLtJ_T0058432.1 MGP_NODShiLtJ_G0026580.1 mouse_genomes_project 2 175744147 175745732 - Rbm39 protein_coding retained_intron MGP_NODShiLtJ_T0017602.1 MGP_NODShiLtJ_G0015272.1 mouse_genomes_project 2 26185661 26200811 + 0610009E02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017603.1 MGP_NODShiLtJ_G0015272.1 mouse_genomes_project 2 26185889 26199427 + 0610009E02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017604.1 MGP_NODShiLtJ_G0015272.1 mouse_genomes_project 2 26185907 26200822 + 0610009E02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0011383.1 MGP_NODShiLtJ_G0009516.1 mouse_genomes_project 2 36602280 36602423 - Gm27953 misc_RNA misc_RNA MGP_NODShiLtJ_T0055520.1 MGP_NODShiLtJ_G0025847.1 mouse_genomes_project 2 97524248 97525178 + MGP_NODShiLtJ_P0055520 protein_coding protein_coding MGP_NODShiLtJ_T0099100.1 MGP_NODShiLtJ_G0037494.1 mouse_genomes_project 2 29947607 29947704 - Gm23865 snRNA snRNA MGP_NODShiLtJ_T0100352.1 MGP_NODShiLtJ_G0038746.1 mouse_genomes_project 2 31313481 31313605 + Gm22516 snoRNA snoRNA MGP_NODShiLtJ_T0055634.1 MGP_NODShiLtJ_G0025946.1 mouse_genomes_project 2 100729157 100730066 - MGP_NODShiLtJ_P0055634 Olfr140 protein_coding protein_coding MGP_NODShiLtJ_T0055635.1 MGP_NODShiLtJ_G0025946.1 mouse_genomes_project 2 100729157 100760725 - MGP_NODShiLtJ_P0055635 Olfr140 protein_coding protein_coding MGP_NODShiLtJ_T0053907.1 MGP_NODShiLtJ_G0025460.1 mouse_genomes_project 2 33037508 33043051 + MGP_NODShiLtJ_P0053907 Tor2a protein_coding protein_coding MGP_NODShiLtJ_T0053908.1 MGP_NODShiLtJ_G0025460.1 mouse_genomes_project 2 33037519 33042746 + MGP_NODShiLtJ_P0053908 Tor2a protein_coding protein_coding MGP_NODShiLtJ_T0053909.1 MGP_NODShiLtJ_G0025460.1 mouse_genomes_project 2 33037529 33042537 + MGP_NODShiLtJ_P0053909 Tor2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053910.1 MGP_NODShiLtJ_G0025460.1 mouse_genomes_project 2 33037534 33043051 + MGP_NODShiLtJ_P0053910 Tor2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053911.1 MGP_NODShiLtJ_G0025460.1 mouse_genomes_project 2 33037550 33043049 + Tor2a protein_coding retained_intron MGP_NODShiLtJ_T0053912.1 MGP_NODShiLtJ_G0025460.1 mouse_genomes_project 2 33037565 33038258 + Tor2a protein_coding processed_transcript MGP_NODShiLtJ_T0053913.1 MGP_NODShiLtJ_G0025460.1 mouse_genomes_project 2 33037593 33042401 + MGP_NODShiLtJ_P0053913 Tor2a protein_coding protein_coding MGP_NODShiLtJ_T0053914.1 MGP_NODShiLtJ_G0025460.1 mouse_genomes_project 2 33040568 33042596 + Tor2a protein_coding retained_intron MGP_NODShiLtJ_T0057650.1 MGP_NODShiLtJ_G0026387.1 mouse_genomes_project 2 157957324 158135513 - MGP_NODShiLtJ_P0057650 Sel1l2 protein_coding protein_coding MGP_NODShiLtJ_T0057651.1 MGP_NODShiLtJ_G0026387.1 mouse_genomes_project 2 158034361 158036786 - Sel1l2 protein_coding processed_transcript MGP_NODShiLtJ_T0057652.1 MGP_NODShiLtJ_G0026387.1 mouse_genomes_project 2 158034366 158135515 - MGP_NODShiLtJ_P0057652 Sel1l2 protein_coding protein_coding MGP_NODShiLtJ_T0003941.1 MGP_NODShiLtJ_G0003509.1 mouse_genomes_project 2 75942029 75977378 + Gm13613 antisense antisense MGP_NODShiLtJ_T0058705.1 MGP_NODShiLtJ_G0026633.1 mouse_genomes_project 2 183103776 183107458 + Srsf6 protein_coding retained_intron MGP_NODShiLtJ_T0058706.1 MGP_NODShiLtJ_G0026633.1 mouse_genomes_project 2 183103776 183109371 + MGP_NODShiLtJ_P0058706 Srsf6 protein_coding protein_coding MGP_NODShiLtJ_T0058707.1 MGP_NODShiLtJ_G0026633.1 mouse_genomes_project 2 183103810 183107276 + MGP_NODShiLtJ_P0058707 Srsf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058708.1 MGP_NODShiLtJ_G0026633.1 mouse_genomes_project 2 183103909 183105758 + MGP_NODShiLtJ_P0058708 Srsf6 protein_coding protein_coding MGP_NODShiLtJ_T0013362.1 MGP_NODShiLtJ_G0011470.1 mouse_genomes_project 2 31818656 31820736 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052944.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25560495 25613816 + MGP_NODShiLtJ_P0052944 Kcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0052945.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25560556 25585713 + Kcnt1 protein_coding retained_intron MGP_NODShiLtJ_T0052946.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25560615 25612888 + MGP_NODShiLtJ_P0052946 Kcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0052947.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25560729 25612888 + MGP_NODShiLtJ_P0052947 Kcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0052948.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25574554 25614334 + MGP_NODShiLtJ_P0052948 Kcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0052949.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25574628 25591946 + Kcnt1 protein_coding retained_intron MGP_NODShiLtJ_T0052950.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25574634 25613382 + MGP_NODShiLtJ_P0052950 Kcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0052951.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25574641 25613851 + Kcnt1 protein_coding retained_intron MGP_NODShiLtJ_T0052952.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25574644 25615044 + MGP_NODShiLtJ_P0052952 Kcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0052953.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25574652 25612888 + MGP_NODShiLtJ_P0052953 Kcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0052954.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25591113 25613363 + Kcnt1 protein_coding retained_intron MGP_NODShiLtJ_T0052955.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25597661 25600166 + MGP_NODShiLtJ_P0052955 Kcnt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052956.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25600272 25606680 + MGP_NODShiLtJ_P0052956 Kcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0052957.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25604833 25613694 + Kcnt1 protein_coding retained_intron MGP_NODShiLtJ_T0052958.1 MGP_NODShiLtJ_G0025312.1 mouse_genomes_project 2 25607664 25613011 + Kcnt1 protein_coding retained_intron MGP_NODShiLtJ_T0055440.1 MGP_NODShiLtJ_G0025776.1 mouse_genomes_project 2 94922928 94923864 + MGP_NODShiLtJ_P0055440 Olfr1023 protein_coding protein_coding MGP_NODShiLtJ_T0052626.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24375416 24488063 - MGP_NODShiLtJ_P0052626 Ehmt1 protein_coding protein_coding MGP_NODShiLtJ_T0052627.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24375764 24518834 - MGP_NODShiLtJ_P0052627 Ehmt1 protein_coding protein_coding MGP_NODShiLtJ_T0052628.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24375764 24392694 - MGP_NODShiLtJ_P0052628 Ehmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052629.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24375764 24518834 - MGP_NODShiLtJ_P0052629 Ehmt1 protein_coding protein_coding MGP_NODShiLtJ_T0052630.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24376571 24518876 - MGP_NODShiLtJ_P0052630 Ehmt1 protein_coding protein_coding MGP_NODShiLtJ_T0052631.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24391571 24412898 - Ehmt1 protein_coding retained_intron MGP_NODShiLtJ_T0052632.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24392608 24429165 - MGP_NODShiLtJ_P0052632 Ehmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052633.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24392666 24393621 - Ehmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0052634.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24410834 24518850 - MGP_NODShiLtJ_P0052634 Ehmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052635.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24412478 24443508 - MGP_NODShiLtJ_P0052635 Ehmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052636.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24424675 24518839 - Ehmt1 protein_coding retained_intron MGP_NODShiLtJ_T0052637.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24437600 24469963 - MGP_NODShiLtJ_P0052637 Ehmt1 protein_coding protein_coding MGP_NODShiLtJ_T0052638.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24455189 24480024 - MGP_NODShiLtJ_P0052638 Ehmt1 protein_coding protein_coding MGP_NODShiLtJ_T0052639.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24455258 24518867 - MGP_NODShiLtJ_P0052639 Ehmt1 protein_coding protein_coding MGP_NODShiLtJ_T0052640.1 MGP_NODShiLtJ_G0025250.1 mouse_genomes_project 2 24455855 24518858 - MGP_NODShiLtJ_P0052640 Ehmt1 protein_coding protein_coding MGP_NODShiLtJ_T0013740.1 MGP_NODShiLtJ_G0011848.1 mouse_genomes_project 2 184964003 184964259 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007217.1 MGP_NODShiLtJ_G0005911.1 mouse_genomes_project 2 116318276 116323378 + Gm13874 lincRNA lincRNA MGP_NODShiLtJ_T0007218.1 MGP_NODShiLtJ_G0005911.1 mouse_genomes_project 2 116318660 116323378 + Gm13874 lincRNA lincRNA MGP_NODShiLtJ_T0007219.1 MGP_NODShiLtJ_G0005911.1 mouse_genomes_project 2 116322711 116328725 + Gm13874 lincRNA lincRNA MGP_NODShiLtJ_T0013454.1 MGP_NODShiLtJ_G0011562.1 mouse_genomes_project 2 68327509 68329097 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052358.1 MGP_NODShiLtJ_G0025201.1 mouse_genomes_project 2 12598949 12722376 + MGP_NODShiLtJ_P0052358 Slc39a12 protein_coding protein_coding MGP_NODShiLtJ_T0052359.1 MGP_NODShiLtJ_G0025201.1 mouse_genomes_project 2 12599139 12600167 + MGP_NODShiLtJ_P0052359 Slc39a12 protein_coding protein_coding MGP_NODShiLtJ_T0007294.1 MGP_NODShiLtJ_G0005972.1 mouse_genomes_project 2 167089693 167100078 + Gm14120 lincRNA lincRNA MGP_NODShiLtJ_T0052937.1 MGP_NODShiLtJ_G0025306.1 mouse_genomes_project 2 25419894 25422970 + MGP_NODShiLtJ_P0052937 Obp2b protein_coding protein_coding MGP_NODShiLtJ_T0013691.1 MGP_NODShiLtJ_G0011799.1 mouse_genomes_project 2 166651777 166652271 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052584.1 MGP_NODShiLtJ_G0025242.1 mouse_genomes_project 2 23706489 23723935 + MGP_NODShiLtJ_P0052584 Il1f9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0001000.1 MGP_NODShiLtJ_G0000926.1 mouse_genomes_project 2 7878802 7880484 + TEC TEC MGP_NODShiLtJ_T0059343.1 MGP_NODShiLtJ_G0026794.1 mouse_genomes_project 2 199803968 199818464 + MGP_NODShiLtJ_P0059343 Fam217b protein_coding protein_coding MGP_NODShiLtJ_T0059344.1 MGP_NODShiLtJ_G0026794.1 mouse_genomes_project 2 199804026 199814137 + Fam217b protein_coding processed_transcript MGP_NODShiLtJ_T0057846.1 MGP_NODShiLtJ_G0026439.1 mouse_genomes_project 2 168692898 168775416 + MGP_NODShiLtJ_P0057846 Syndig1 protein_coding protein_coding MGP_NODShiLtJ_T0057848.1 MGP_NODShiLtJ_G0026439.1 mouse_genomes_project 2 168694475 168884082 + MGP_NODShiLtJ_P0057848 Syndig1 protein_coding protein_coding MGP_NODShiLtJ_T0057849.1 MGP_NODShiLtJ_G0026439.1 mouse_genomes_project 2 168694556 168775457 + MGP_NODShiLtJ_P0057849 Syndig1 protein_coding protein_coding MGP_NODShiLtJ_T0057850.1 MGP_NODShiLtJ_G0026439.1 mouse_genomes_project 2 168694588 168775453 + MGP_NODShiLtJ_P0057850 Syndig1 protein_coding protein_coding MGP_NODShiLtJ_T0057851.1 MGP_NODShiLtJ_G0026439.1 mouse_genomes_project 2 168694609 168775583 + MGP_NODShiLtJ_P0057851 Syndig1 protein_coding protein_coding MGP_NODShiLtJ_T0057852.1 MGP_NODShiLtJ_G0026439.1 mouse_genomes_project 2 168771715 168884082 + MGP_NODShiLtJ_P0057852 Syndig1 protein_coding protein_coding MGP_NODShiLtJ_T0055518.1 MGP_NODShiLtJ_G0025845.1 mouse_genomes_project 2 97383313 97552033 - MGP_NODShiLtJ_P0055518 protein_coding protein_coding MGP_NODShiLtJ_T0052743.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24886189 24896751 - MGP_NODShiLtJ_P0052743 Ndor1 protein_coding protein_coding MGP_NODShiLtJ_T0052744.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24886230 24896754 - MGP_NODShiLtJ_P0052744 Ndor1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052745.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24886937 24889354 - Ndor1 protein_coding processed_transcript MGP_NODShiLtJ_T0052746.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24888596 24896777 - MGP_NODShiLtJ_P0052746 Ndor1 protein_coding protein_coding MGP_NODShiLtJ_T0052747.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24888795 24896754 - MGP_NODShiLtJ_P0052747 Ndor1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052748.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24888954 24889839 - Ndor1 protein_coding retained_intron MGP_NODShiLtJ_T0052749.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24890839 24896714 - MGP_NODShiLtJ_P0052749 Ndor1 protein_coding protein_coding MGP_NODShiLtJ_T0052750.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24890867 24891710 - Ndor1 protein_coding retained_intron MGP_NODShiLtJ_T0052751.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24891491 24896784 - MGP_NODShiLtJ_P0052751 Ndor1 protein_coding protein_coding MGP_NODShiLtJ_T0052752.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24891542 24896736 - Ndor1 protein_coding processed_transcript MGP_NODShiLtJ_T0052753.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24892855 24896629 - Ndor1 protein_coding retained_intron MGP_NODShiLtJ_T0052754.1 MGP_NODShiLtJ_G0025269.1 mouse_genomes_project 2 24893115 24897390 - MGP_NODShiLtJ_P0052754 Ndor1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055227.1 MGP_NODShiLtJ_G0025715.1 mouse_genomes_project 2 87171617 87176247 - MGP_NODShiLtJ_P0055227 Neurod1 protein_coding protein_coding MGP_NODShiLtJ_T0099095.1 MGP_NODShiLtJ_G0037489.1 mouse_genomes_project 2 24660444 24660548 - Gm24875 snRNA snRNA MGP_NODShiLtJ_T0056117.1 MGP_NODShiLtJ_G0026029.1 mouse_genomes_project 2 116752427 116909333 + MGP_NODShiLtJ_P0056117 Abtb2 protein_coding protein_coding MGP_NODShiLtJ_T0056118.1 MGP_NODShiLtJ_G0026029.1 mouse_genomes_project 2 116905944 116908127 + Abtb2 protein_coding processed_transcript MGP_NODShiLtJ_T0056119.1 MGP_NODShiLtJ_G0026029.1 mouse_genomes_project 2 116905990 116909333 + Abtb2 protein_coding processed_transcript MGP_NODShiLtJ_T0052935.1 MGP_NODShiLtJ_G0025304.1 mouse_genomes_project 2 25380889 25385487 + MGP_NODShiLtJ_P0052935 Obp2a protein_coding protein_coding MGP_NODShiLtJ_T0099093.1 MGP_NODShiLtJ_G0037487.1 mouse_genomes_project 2 19302367 19302474 + Gm23970 snRNA snRNA MGP_NODShiLtJ_T0013697.1 MGP_NODShiLtJ_G0011805.1 mouse_genomes_project 2 169893404 169893743 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098003.1 MGP_NODShiLtJ_G0036415.1 mouse_genomes_project 2 67280631 67280748 + Gm25966 rRNA rRNA MGP_NODShiLtJ_T0017626.1 MGP_NODShiLtJ_G0015286.1 mouse_genomes_project 2 39516742 39520752 + Gm13587 processed_transcript processed_transcript MGP_NODShiLtJ_T0013694.1 MGP_NODShiLtJ_G0011802.1 mouse_genomes_project 2 168173124 168173844 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007182.1 MGP_NODShiLtJ_G0005882.1 mouse_genomes_project 2 82038997 82039640 + Gm14426 lincRNA lincRNA MGP_NODShiLtJ_T0056382.1 MGP_NODShiLtJ_G0026111.1 mouse_genomes_project 2 128143329 128162784 + MGP_NODShiLtJ_P0056382 Tmco5b protein_coding protein_coding MGP_NODShiLtJ_T0013289.1 MGP_NODShiLtJ_G0011397.1 mouse_genomes_project 2 1102498 1103062 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003995.1 MGP_NODShiLtJ_G0003541.1 mouse_genomes_project 2 118909760 119043679 - Pax6os1 antisense antisense MGP_NODShiLtJ_T0003996.1 MGP_NODShiLtJ_G0003541.1 mouse_genomes_project 2 118910600 119043629 - Pax6os1 antisense antisense MGP_NODShiLtJ_T0003906.1 MGP_NODShiLtJ_G0003481.1 mouse_genomes_project 2 35440105 35459498 + Gm13449 antisense antisense MGP_NODShiLtJ_T0054249.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38562904 39115927 - MGP_NODShiLtJ_P0054249 Dennd1a protein_coding protein_coding MGP_NODShiLtJ_T0054250.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38564985 38619243 - MGP_NODShiLtJ_P0054250 Dennd1a protein_coding protein_coding MGP_NODShiLtJ_T0054251.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38583730 39115942 - MGP_NODShiLtJ_P0054251 Dennd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054252.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38711588 39115929 - MGP_NODShiLtJ_P0054252 Dennd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054253.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38711633 39115740 - MGP_NODShiLtJ_P0054253 Dennd1a protein_coding protein_coding MGP_NODShiLtJ_T0054254.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38803808 38968732 - Dennd1a protein_coding retained_intron MGP_NODShiLtJ_T0054255.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38825578 39115910 - MGP_NODShiLtJ_P0054255 Dennd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054256.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38916744 39115770 - MGP_NODShiLtJ_P0054256 Dennd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054257.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38961041 39068497 - Dennd1a protein_coding retained_intron MGP_NODShiLtJ_T0054258.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 38965522 38970470 - Dennd1a protein_coding retained_intron MGP_NODShiLtJ_T0054259.1 MGP_NODShiLtJ_G0025537.1 mouse_genomes_project 2 39059558 39115766 - Dennd1a protein_coding retained_intron MGP_NODShiLtJ_T0056214.1 MGP_NODShiLtJ_G0026050.1 mouse_genomes_project 2 118473368 118522995 + MGP_NODShiLtJ_P0056214 Wt1 protein_coding protein_coding MGP_NODShiLtJ_T0056215.1 MGP_NODShiLtJ_G0026050.1 mouse_genomes_project 2 118473835 118521726 + MGP_NODShiLtJ_P0056215 Wt1 protein_coding protein_coding MGP_NODShiLtJ_T0056216.1 MGP_NODShiLtJ_G0026050.1 mouse_genomes_project 2 118473840 118521728 + MGP_NODShiLtJ_P0056216 Wt1 protein_coding protein_coding MGP_NODShiLtJ_T0056217.1 MGP_NODShiLtJ_G0026050.1 mouse_genomes_project 2 118473840 118521649 + MGP_NODShiLtJ_P0056217 Wt1 protein_coding protein_coding MGP_NODShiLtJ_T0056218.1 MGP_NODShiLtJ_G0026050.1 mouse_genomes_project 2 118477633 118482071 + Wt1 protein_coding retained_intron MGP_NODShiLtJ_T0056219.1 MGP_NODShiLtJ_G0026050.1 mouse_genomes_project 2 118477716 118522995 + MGP_NODShiLtJ_P0056219 Wt1 protein_coding protein_coding MGP_NODShiLtJ_T0056220.1 MGP_NODShiLtJ_G0026050.1 mouse_genomes_project 2 118477716 118522999 + MGP_NODShiLtJ_P0056220 Wt1 protein_coding protein_coding MGP_NODShiLtJ_T0056221.1 MGP_NODShiLtJ_G0026050.1 mouse_genomes_project 2 118512205 118519395 + Wt1 protein_coding retained_intron MGP_NODShiLtJ_T0058120.1 MGP_NODShiLtJ_G0026522.1 mouse_genomes_project 2 173232256 173247152 + MGP_NODShiLtJ_P0058120 Bpifb3 protein_coding protein_coding MGP_NODShiLtJ_T0058121.1 MGP_NODShiLtJ_G0026522.1 mouse_genomes_project 2 173232420 173247149 + MGP_NODShiLtJ_P0058121 Bpifb3 protein_coding protein_coding MGP_NODShiLtJ_T0056892.1 MGP_NODShiLtJ_G0026207.1 mouse_genomes_project 2 137121797 137158549 + MGP_NODShiLtJ_P0056892 Pdia3 protein_coding protein_coding MGP_NODShiLtJ_T0056893.1 MGP_NODShiLtJ_G0026207.1 mouse_genomes_project 2 137121905 137136271 + Pdia3 protein_coding processed_transcript MGP_NODShiLtJ_T0056894.1 MGP_NODShiLtJ_G0026207.1 mouse_genomes_project 2 137122130 137145095 + MGP_NODShiLtJ_P0056894 Pdia3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056895.1 MGP_NODShiLtJ_G0026207.1 mouse_genomes_project 2 137136299 137143542 + Pdia3 protein_coding retained_intron MGP_NODShiLtJ_T0013613.1 MGP_NODShiLtJ_G0011721.1 mouse_genomes_project 2 129680120 129680902 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055606.1 MGP_NODShiLtJ_G0025927.1 mouse_genomes_project 2 99996425 99997478 - MGP_NODShiLtJ_P0055606 Olfr1242 protein_coding protein_coding MGP_NODShiLtJ_T0055607.1 MGP_NODShiLtJ_G0025927.1 mouse_genomes_project 2 99996521 100003846 - MGP_NODShiLtJ_P0055607 Olfr1242 protein_coding protein_coding MGP_NODShiLtJ_T0055608.1 MGP_NODShiLtJ_G0025927.1 mouse_genomes_project 2 99997151 100003336 - Olfr1242 protein_coding processed_transcript MGP_NODShiLtJ_T0059000.1 MGP_NODShiLtJ_G0026716.1 mouse_genomes_project 2 186054799 186244282 + MGP_NODShiLtJ_P0059000 Eya2 protein_coding protein_coding MGP_NODShiLtJ_T0059001.1 MGP_NODShiLtJ_G0026716.1 mouse_genomes_project 2 186118609 186244290 + MGP_NODShiLtJ_P0059001 Eya2 protein_coding protein_coding MGP_NODShiLtJ_T0059002.1 MGP_NODShiLtJ_G0026716.1 mouse_genomes_project 2 186118629 186181930 + Eya2 protein_coding processed_transcript MGP_NODShiLtJ_T0059003.1 MGP_NODShiLtJ_G0026716.1 mouse_genomes_project 2 186178591 186238557 + Eya2 protein_coding processed_transcript MGP_NODShiLtJ_T0059004.1 MGP_NODShiLtJ_G0026716.1 mouse_genomes_project 2 186234094 186239416 + Eya2 protein_coding processed_transcript MGP_NODShiLtJ_T0059005.1 MGP_NODShiLtJ_G0026716.1 mouse_genomes_project 2 186241623 186243829 + Eya2 protein_coding processed_transcript MGP_NODShiLtJ_T0055716.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101910189 101922095 - MGP_NODShiLtJ_P0055716 Slc39a13 protein_coding protein_coding MGP_NODShiLtJ_T0055717.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101910189 101921907 - MGP_NODShiLtJ_P0055717 Slc39a13 protein_coding protein_coding MGP_NODShiLtJ_T0055718.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101911271 101921961 - MGP_NODShiLtJ_P0055718 Slc39a13 protein_coding protein_coding MGP_NODShiLtJ_T0055719.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101911519 101913844 - Slc39a13 protein_coding processed_transcript MGP_NODShiLtJ_T0055720.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101911522 101912784 - Slc39a13 protein_coding processed_transcript MGP_NODShiLtJ_T0055721.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101911802 101921976 - Slc39a13 protein_coding processed_transcript MGP_NODShiLtJ_T0055722.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101913038 101914574 - Slc39a13 protein_coding processed_transcript MGP_NODShiLtJ_T0055723.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101913978 101921917 - Slc39a13 protein_coding processed_transcript MGP_NODShiLtJ_T0055724.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101914443 101921865 - MGP_NODShiLtJ_P0055724 Slc39a13 protein_coding protein_coding MGP_NODShiLtJ_T0055725.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101920108 101920549 - Slc39a13 protein_coding processed_transcript MGP_NODShiLtJ_T0055726.1 MGP_NODShiLtJ_G0025964.1 mouse_genomes_project 2 101920795 101921917 - Slc39a13 protein_coding processed_transcript MGP_NODShiLtJ_T0059237.1 MGP_NODShiLtJ_G0026765.1 mouse_genomes_project 2 193664682 193666494 + MGP_NODShiLtJ_P0059237 Fam209 protein_coding protein_coding MGP_NODShiLtJ_T0013306.1 MGP_NODShiLtJ_G0011414.1 mouse_genomes_project 2 8979764 8980698 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013484.1 MGP_NODShiLtJ_G0011592.1 mouse_genomes_project 2 80331757 80332102 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055568.1 MGP_NODShiLtJ_G0025891.1 mouse_genomes_project 2 98976203 98977130 - MGP_NODShiLtJ_P0055568 Olfr1198 protein_coding protein_coding MGP_NODShiLtJ_T0010370.1 MGP_NODShiLtJ_G0008503.1 mouse_genomes_project 2 178005476 178005538 - Mir7685 miRNA miRNA MGP_NODShiLtJ_T0056167.1 MGP_NODShiLtJ_G0026036.1 mouse_genomes_project 2 117267862 117284690 + MGP_NODShiLtJ_P0056167 Cd59b protein_coding protein_coding MGP_NODShiLtJ_T0056168.1 MGP_NODShiLtJ_G0026036.1 mouse_genomes_project 2 117270900 117284831 + MGP_NODShiLtJ_P0056168 Cd59b protein_coding protein_coding MGP_NODShiLtJ_T0007272.1 MGP_NODShiLtJ_G0005954.1 mouse_genomes_project 2 149350026 149409294 + AU019990 lincRNA lincRNA MGP_NODShiLtJ_T0007273.1 MGP_NODShiLtJ_G0005954.1 mouse_genomes_project 2 149350026 149406382 + AU019990 lincRNA lincRNA MGP_NODShiLtJ_T0055797.1 MGP_NODShiLtJ_G0025972.1 mouse_genomes_project 2 102134126 102160822 + MGP_NODShiLtJ_P0055797 Arfgap2 protein_coding protein_coding MGP_NODShiLtJ_T0055800.1 MGP_NODShiLtJ_G0025972.1 mouse_genomes_project 2 102149538 102160822 + MGP_NODShiLtJ_P0055800 Arfgap2 protein_coding protein_coding MGP_NODShiLtJ_T0055801.1 MGP_NODShiLtJ_G0025972.1 mouse_genomes_project 2 102149569 102150792 + Arfgap2 protein_coding retained_intron MGP_NODShiLtJ_T0055802.1 MGP_NODShiLtJ_G0025972.1 mouse_genomes_project 2 102149579 102152990 + Arfgap2 protein_coding retained_intron MGP_NODShiLtJ_T0055803.1 MGP_NODShiLtJ_G0025972.1 mouse_genomes_project 2 102149947 102151634 + Arfgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0055804.1 MGP_NODShiLtJ_G0025972.1 mouse_genomes_project 2 102153579 102157895 + Arfgap2 protein_coding retained_intron MGP_NODShiLtJ_T0055805.1 MGP_NODShiLtJ_G0025972.1 mouse_genomes_project 2 102154329 102158413 + Arfgap2 protein_coding retained_intron MGP_NODShiLtJ_T0013535.1 MGP_NODShiLtJ_G0011643.1 mouse_genomes_project 2 97348027 97348437 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101437.1 MGP_NODShiLtJ_G0039625.1 mouse_genomes_project 2 119432790 119471538 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101438.1 MGP_NODShiLtJ_G0039625.1 mouse_genomes_project 2 119469134 119859885 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0101439.1 MGP_NODShiLtJ_G0039625.1 mouse_genomes_project 2 119678385 119859885 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101440.1 MGP_NODShiLtJ_G0039625.1 mouse_genomes_project 2 119682763 119803964 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101441.1 MGP_NODShiLtJ_G0039625.1 mouse_genomes_project 2 119857948 119880242 + unitary_pseudogene retained_intron MGP_NODShiLtJ_T0054123.1 MGP_NODShiLtJ_G0025491.1 mouse_genomes_project 2 35814876 35831653 - MGP_NODShiLtJ_P0054123 4930568D16Rik protein_coding protein_coding MGP_NODShiLtJ_T0059078.1 MGP_NODShiLtJ_G0026725.1 mouse_genomes_project 2 187678043 187706175 - MGP_NODShiLtJ_P0059078 Znfx1 protein_coding protein_coding MGP_NODShiLtJ_T0059079.1 MGP_NODShiLtJ_G0026725.1 mouse_genomes_project 2 187678049 187685746 - MGP_NODShiLtJ_P0059079 Znfx1 protein_coding protein_coding MGP_NODShiLtJ_T0059080.1 MGP_NODShiLtJ_G0026725.1 mouse_genomes_project 2 187686364 187703498 - MGP_NODShiLtJ_P0059080 Znfx1 protein_coding protein_coding MGP_NODShiLtJ_T0059081.1 MGP_NODShiLtJ_G0026725.1 mouse_genomes_project 2 187686449 187705789 - MGP_NODShiLtJ_P0059081 Znfx1 protein_coding protein_coding MGP_NODShiLtJ_T0059082.1 MGP_NODShiLtJ_G0026725.1 mouse_genomes_project 2 187691597 187705712 - Znfx1 protein_coding retained_intron MGP_NODShiLtJ_T0055455.1 MGP_NODShiLtJ_G0025790.1 mouse_genomes_project 2 95277481 95278426 - MGP_NODShiLtJ_P0055455 Olfr1044 protein_coding protein_coding MGP_NODShiLtJ_T0001007.1 MGP_NODShiLtJ_G0000933.1 mouse_genomes_project 2 9294551 9295672 - TEC TEC MGP_NODShiLtJ_T0058755.1 MGP_NODShiLtJ_G0026646.1 mouse_genomes_project 2 183822360 183838859 + MGP_NODShiLtJ_P0058755 Ttpal protein_coding protein_coding MGP_NODShiLtJ_T0058756.1 MGP_NODShiLtJ_G0026646.1 mouse_genomes_project 2 183822368 183836347 + MGP_NODShiLtJ_P0058756 Ttpal protein_coding protein_coding MGP_NODShiLtJ_T0058757.1 MGP_NODShiLtJ_G0026646.1 mouse_genomes_project 2 183822395 183832700 + Ttpal protein_coding retained_intron MGP_NODShiLtJ_T0058758.1 MGP_NODShiLtJ_G0026646.1 mouse_genomes_project 2 183822395 183827326 + MGP_NODShiLtJ_P0058758 Ttpal protein_coding protein_coding MGP_NODShiLtJ_T0058759.1 MGP_NODShiLtJ_G0026646.1 mouse_genomes_project 2 183822397 183838860 + MGP_NODShiLtJ_P0058759 Ttpal protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058760.1 MGP_NODShiLtJ_G0026646.1 mouse_genomes_project 2 183822609 183831744 + MGP_NODShiLtJ_P0058760 Ttpal protein_coding protein_coding MGP_NODShiLtJ_T0058761.1 MGP_NODShiLtJ_G0026646.1 mouse_genomes_project 2 183831366 183835273 + Ttpal protein_coding retained_intron MGP_NODShiLtJ_T0013357.1 MGP_NODShiLtJ_G0011465.1 mouse_genomes_project 2 28722303 28722523 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054961.1 MGP_NODShiLtJ_G0025661.1 mouse_genomes_project 2 78513046 78518916 + MGP_NODShiLtJ_P0054961 Dlx1 protein_coding protein_coding MGP_NODShiLtJ_T0054962.1 MGP_NODShiLtJ_G0025661.1 mouse_genomes_project 2 78513616 78514999 + MGP_NODShiLtJ_P0054962 Dlx1 protein_coding protein_coding MGP_NODShiLtJ_T0054963.1 MGP_NODShiLtJ_G0025661.1 mouse_genomes_project 2 78514034 78515165 + MGP_NODShiLtJ_P0054963 Dlx1 protein_coding protein_coding MGP_NODShiLtJ_T0054964.1 MGP_NODShiLtJ_G0025661.1 mouse_genomes_project 2 78514786 78517461 + MGP_NODShiLtJ_P0054964 Dlx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054965.1 MGP_NODShiLtJ_G0025661.1 mouse_genomes_project 2 78514880 78518917 + Dlx1 protein_coding retained_intron MGP_NODShiLtJ_T0054966.1 MGP_NODShiLtJ_G0025661.1 mouse_genomes_project 2 78515713 78517630 + Dlx1 protein_coding retained_intron MGP_NODShiLtJ_T0100370.1 MGP_NODShiLtJ_G0038764.1 mouse_genomes_project 2 66673185 66673317 + Gm26422 snoRNA snoRNA MGP_NODShiLtJ_T0010382.1 MGP_NODShiLtJ_G0008515.1 mouse_genomes_project 2 189954504 189954625 + Gm26469 miRNA miRNA MGP_NODShiLtJ_T0058553.1 MGP_NODShiLtJ_G0026601.1 mouse_genomes_project 2 177059636 177091198 + MGP_NODShiLtJ_P0058553 Manbal protein_coding protein_coding MGP_NODShiLtJ_T0058598.1 MGP_NODShiLtJ_G0026610.1 mouse_genomes_project 2 177942282 177990587 - MGP_NODShiLtJ_P0058598 D630003M21Rik protein_coding protein_coding MGP_NODShiLtJ_T0058599.1 MGP_NODShiLtJ_G0026610.1 mouse_genomes_project 2 177945908 177990587 - MGP_NODShiLtJ_P0058599 D630003M21Rik protein_coding protein_coding MGP_NODShiLtJ_T0058600.1 MGP_NODShiLtJ_G0026610.1 mouse_genomes_project 2 177955486 177990587 - MGP_NODShiLtJ_P0058600 D630003M21Rik protein_coding protein_coding MGP_NODShiLtJ_T0017722.1 MGP_NODShiLtJ_G0015337.1 mouse_genomes_project 2 145692625 145713060 - 9830144P21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017723.1 MGP_NODShiLtJ_G0015337.1 mouse_genomes_project 2 145710805 145717227 - 9830144P21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0056354.1 MGP_NODShiLtJ_G0026102.1 mouse_genomes_project 2 127042824 127044170 + MGP_NODShiLtJ_P0056354 Nop10 protein_coding protein_coding MGP_NODShiLtJ_T0054393.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52402484 52805546 + MGP_NODShiLtJ_P0054393 Mbd5 protein_coding protein_coding MGP_NODShiLtJ_T0054394.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52402494 52613033 + Mbd5 protein_coding processed_transcript MGP_NODShiLtJ_T0054395.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52402499 52873859 + MGP_NODShiLtJ_P0054395 Mbd5 protein_coding protein_coding MGP_NODShiLtJ_T0054396.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52402938 52504852 + Mbd5 protein_coding processed_transcript MGP_NODShiLtJ_T0054397.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52403041 52612897 + Mbd5 protein_coding processed_transcript MGP_NODShiLtJ_T0054398.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52403119 52790611 + Mbd5 protein_coding processed_transcript MGP_NODShiLtJ_T0054399.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52403125 52553603 + Mbd5 protein_coding processed_transcript MGP_NODShiLtJ_T0054400.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52791022 52877888 + MGP_NODShiLtJ_P0054400 Mbd5 protein_coding protein_coding MGP_NODShiLtJ_T0054401.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52791223 52820379 + MGP_NODShiLtJ_P0054401 Mbd5 protein_coding protein_coding MGP_NODShiLtJ_T0054402.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52800923 52873885 + MGP_NODShiLtJ_P0054402 Mbd5 protein_coding protein_coding MGP_NODShiLtJ_T0054403.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52820483 52883603 + MGP_NODShiLtJ_P0054403 Mbd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054404.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52828550 52873539 + MGP_NODShiLtJ_P0054404 Mbd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054405.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52828551 52873550 + MGP_NODShiLtJ_P0054405 Mbd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054406.1 MGP_NODShiLtJ_G0025557.1 mouse_genomes_project 2 52828699 52873773 + MGP_NODShiLtJ_P0054406 Mbd5 protein_coding protein_coding MGP_NODShiLtJ_T0001050.1 MGP_NODShiLtJ_G0000976.1 mouse_genomes_project 2 39372811 39375409 - TEC TEC MGP_NODShiLtJ_T0013517.1 MGP_NODShiLtJ_G0011625.1 mouse_genomes_project 2 92173208 92173349 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013403.1 MGP_NODShiLtJ_G0011511.1 mouse_genomes_project 2 49238012 49238362 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100424.1 MGP_NODShiLtJ_G0038818.1 mouse_genomes_project 2 185669383 185669514 - Gm25569 snoRNA snoRNA MGP_NODShiLtJ_T0056831.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136901735 136920389 - Trp53bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056832.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136903293 136978922 - MGP_NODShiLtJ_P0056832 Trp53bp1 protein_coding protein_coding MGP_NODShiLtJ_T0056833.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136903293 136978988 - MGP_NODShiLtJ_P0056833 Trp53bp1 protein_coding protein_coding MGP_NODShiLtJ_T0056834.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136906684 136945612 - MGP_NODShiLtJ_P0056834 Trp53bp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056835.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136908072 136913408 - Trp53bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056836.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136911127 136916175 - MGP_NODShiLtJ_P0056836 Trp53bp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056837.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136913507 136916991 - Trp53bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056838.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136916836 136929614 - MGP_NODShiLtJ_P0056838 Trp53bp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056839.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136917261 136929605 - Trp53bp1 protein_coding retained_intron MGP_NODShiLtJ_T0056840.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136919715 136926825 - Trp53bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056841.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136924313 136929752 - Trp53bp1 protein_coding retained_intron MGP_NODShiLtJ_T0056842.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136924549 136978902 - MGP_NODShiLtJ_P0056842 Trp53bp1 protein_coding protein_coding MGP_NODShiLtJ_T0056843.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136938026 136945295 - MGP_NODShiLtJ_P0056843 Trp53bp1 protein_coding protein_coding MGP_NODShiLtJ_T0056844.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136941697 136945427 - Trp53bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056845.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136946429 136961360 - MGP_NODShiLtJ_P0056845 Trp53bp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056846.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136965846 136978950 - Trp53bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056847.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136968060 136977867 - Trp53bp1 protein_coding retained_intron MGP_NODShiLtJ_T0056848.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136974893 136978942 - Trp53bp1 protein_coding retained_intron MGP_NODShiLtJ_T0056849.1 MGP_NODShiLtJ_G0026201.1 mouse_genomes_project 2 136977210 136978951 - Trp53bp1 protein_coding retained_intron MGP_NODShiLtJ_T0059156.1 MGP_NODShiLtJ_G0026744.1 mouse_genomes_project 2 189064111 189087843 - MGP_NODShiLtJ_P0059156 Kcng1 protein_coding protein_coding MGP_NODShiLtJ_T0059157.1 MGP_NODShiLtJ_G0026744.1 mouse_genomes_project 2 189065692 189075152 - MGP_NODShiLtJ_P0059157 Kcng1 protein_coding protein_coding MGP_NODShiLtJ_T0059158.1 MGP_NODShiLtJ_G0026744.1 mouse_genomes_project 2 189074919 189088498 - MGP_NODShiLtJ_P0059158 Kcng1 protein_coding protein_coding MGP_NODShiLtJ_T0007380.1 MGP_NODShiLtJ_G0006046.1 mouse_genomes_project 2 202401188 202403678 + lincRNA lincRNA MGP_NODShiLtJ_T0010342.1 MGP_NODShiLtJ_G0008475.1 mouse_genomes_project 2 129084717 129084772 - Mir7002 miRNA miRNA MGP_NODShiLtJ_T0001032.1 MGP_NODShiLtJ_G0000958.1 mouse_genomes_project 2 13861886 13863627 + TEC TEC MGP_NODShiLtJ_T0055535.1 MGP_NODShiLtJ_G0025860.1 mouse_genomes_project 2 97866031 97866964 + MGP_NODShiLtJ_P0055535 Olfr1152 protein_coding protein_coding MGP_NODShiLtJ_T0100399.1 MGP_NODShiLtJ_G0038793.1 mouse_genomes_project 2 146824134 146824220 + Gm23187 snoRNA snoRNA MGP_NODShiLtJ_T0057955.1 MGP_NODShiLtJ_G0026469.1 mouse_genomes_project 2 171210472 171224730 + MGP_NODShiLtJ_P0057955 Scrt2 protein_coding protein_coding MGP_NODShiLtJ_T0004088.1 MGP_NODShiLtJ_G0003611.1 mouse_genomes_project 2 177823046 177846871 - 2010009K17Rik antisense antisense MGP_NODShiLtJ_T0004087.1 MGP_NODShiLtJ_G0003610.1 mouse_genomes_project 2 177252998 177254203 - Gm14286 antisense antisense MGP_NODShiLtJ_T0007215.1 MGP_NODShiLtJ_G0005909.1 mouse_genomes_project 2 108760947 108892424 - lincRNA lincRNA MGP_NODShiLtJ_T0055852.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102664113 102867791 + MGP_NODShiLtJ_P0055852 Ambra1 protein_coding protein_coding MGP_NODShiLtJ_T0055853.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102664117 102867790 + MGP_NODShiLtJ_P0055853 Ambra1 protein_coding protein_coding MGP_NODShiLtJ_T0055854.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102664161 102750462 + Ambra1 protein_coding processed_transcript MGP_NODShiLtJ_T0055855.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102664161 102750462 + Ambra1 protein_coding processed_transcript MGP_NODShiLtJ_T0055856.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102664163 102867790 + MGP_NODShiLtJ_P0055856 Ambra1 protein_coding protein_coding MGP_NODShiLtJ_T0055857.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102664204 102867791 + MGP_NODShiLtJ_P0055857 Ambra1 protein_coding protein_coding MGP_NODShiLtJ_T0055858.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102702930 102867791 + MGP_NODShiLtJ_P0055858 Ambra1 protein_coding protein_coding MGP_NODShiLtJ_T0055859.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102709621 102766067 + Ambra1 protein_coding processed_transcript MGP_NODShiLtJ_T0055860.1 MGP_NODShiLtJ_G0025981.1 mouse_genomes_project 2 102751160 102766900 + Ambra1 protein_coding processed_transcript MGP_NODShiLtJ_T0054287.1 MGP_NODShiLtJ_G0025544.1 mouse_genomes_project 2 39881854 39890547 + MGP_NODShiLtJ_P0054287 Wdr38 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054288.1 MGP_NODShiLtJ_G0025544.1 mouse_genomes_project 2 39882697 39885961 + MGP_NODShiLtJ_P0054288 Wdr38 protein_coding protein_coding MGP_NODShiLtJ_T0054289.1 MGP_NODShiLtJ_G0025544.1 mouse_genomes_project 2 39882710 39884653 + Wdr38 protein_coding processed_transcript MGP_NODShiLtJ_T0100385.1 MGP_NODShiLtJ_G0038779.1 mouse_genomes_project 2 117459852 117459982 - Gm22501 snoRNA snoRNA MGP_NODShiLtJ_T0052592.1 MGP_NODShiLtJ_G0025246.1 mouse_genomes_project 2 23887375 23904374 + MGP_NODShiLtJ_P0052592 Il1rn protein_coding protein_coding MGP_NODShiLtJ_T0052593.1 MGP_NODShiLtJ_G0025246.1 mouse_genomes_project 2 23887378 23889932 + Il1rn protein_coding retained_intron MGP_NODShiLtJ_T0052594.1 MGP_NODShiLtJ_G0025246.1 mouse_genomes_project 2 23887378 23902337 + MGP_NODShiLtJ_P0052594 Il1rn protein_coding protein_coding MGP_NODShiLtJ_T0052595.1 MGP_NODShiLtJ_G0025246.1 mouse_genomes_project 2 23897054 23902687 + MGP_NODShiLtJ_P0052595 Il1rn protein_coding protein_coding MGP_NODShiLtJ_T0052596.1 MGP_NODShiLtJ_G0025246.1 mouse_genomes_project 2 23897076 23903816 + MGP_NODShiLtJ_P0052596 Il1rn protein_coding protein_coding MGP_NODShiLtJ_T0052597.1 MGP_NODShiLtJ_G0025246.1 mouse_genomes_project 2 23897114 23899234 + Il1rn protein_coding processed_transcript MGP_NODShiLtJ_T0013346.1 MGP_NODShiLtJ_G0011454.1 mouse_genomes_project 2 23058614 23059518 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057568.1 MGP_NODShiLtJ_G0026368.1 mouse_genomes_project 2 150388757 150411077 + MGP_NODShiLtJ_P0057568 Bmp2 protein_coding protein_coding MGP_NODShiLtJ_T0058938.1 MGP_NODShiLtJ_G0026703.1 mouse_genomes_project 2 185369514 185409129 - MGP_NODShiLtJ_P0058938 Ncoa5 protein_coding protein_coding MGP_NODShiLtJ_T0058939.1 MGP_NODShiLtJ_G0026703.1 mouse_genomes_project 2 185369517 185409079 - MGP_NODShiLtJ_P0058939 Ncoa5 protein_coding protein_coding MGP_NODShiLtJ_T0058940.1 MGP_NODShiLtJ_G0026703.1 mouse_genomes_project 2 185369520 185409050 - MGP_NODShiLtJ_P0058940 Ncoa5 protein_coding protein_coding MGP_NODShiLtJ_T0058941.1 MGP_NODShiLtJ_G0026703.1 mouse_genomes_project 2 185371831 185373814 - Ncoa5 protein_coding retained_intron MGP_NODShiLtJ_T0058942.1 MGP_NODShiLtJ_G0026703.1 mouse_genomes_project 2 185381764 185409065 - Ncoa5 protein_coding retained_intron MGP_NODShiLtJ_T0058943.1 MGP_NODShiLtJ_G0026703.1 mouse_genomes_project 2 185387491 185409091 - MGP_NODShiLtJ_P0058943 Ncoa5 protein_coding protein_coding MGP_NODShiLtJ_T0058944.1 MGP_NODShiLtJ_G0026703.1 mouse_genomes_project 2 185397159 185397701 - Ncoa5 protein_coding processed_transcript MGP_NODShiLtJ_T0058945.1 MGP_NODShiLtJ_G0026703.1 mouse_genomes_project 2 185397429 185409049 - Ncoa5 protein_coding retained_intron MGP_NODShiLtJ_T0013586.1 MGP_NODShiLtJ_G0011694.1 mouse_genomes_project 2 118181569 118181896 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056567.1 MGP_NODShiLtJ_G0026154.1 mouse_genomes_project 2 134774646 134788005 + MGP_NODShiLtJ_P0056567 Spint1 protein_coding protein_coding MGP_NODShiLtJ_T0056568.1 MGP_NODShiLtJ_G0026154.1 mouse_genomes_project 2 134774761 134787686 + MGP_NODShiLtJ_P0056568 Spint1 protein_coding protein_coding MGP_NODShiLtJ_T0056569.1 MGP_NODShiLtJ_G0026154.1 mouse_genomes_project 2 134774837 134788018 + MGP_NODShiLtJ_P0056569 Spint1 protein_coding protein_coding MGP_NODShiLtJ_T0056570.1 MGP_NODShiLtJ_G0026154.1 mouse_genomes_project 2 134784858 134787393 + Spint1 protein_coding retained_intron MGP_NODShiLtJ_T0056571.1 MGP_NODShiLtJ_G0026154.1 mouse_genomes_project 2 134786695 134787540 + Spint1 protein_coding retained_intron MGP_NODShiLtJ_T0013486.1 MGP_NODShiLtJ_G0011594.1 mouse_genomes_project 2 81190315 81191316 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001066.1 MGP_NODShiLtJ_G0000992.1 mouse_genomes_project 2 116519844 116523249 - TEC TEC MGP_NODShiLtJ_T0017638.1 MGP_NODShiLtJ_G0015294.1 mouse_genomes_project 2 76700542 76701308 - Gm13625 processed_transcript processed_transcript MGP_NODShiLtJ_T0010350.1 MGP_NODShiLtJ_G0008483.1 mouse_genomes_project 2 143266683 143266819 - Mir3473g miRNA miRNA MGP_NODShiLtJ_T0101817.1 MGP_NODShiLtJ_G0039985.1 mouse_genomes_project 2 96545552 96546491 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013355.1 MGP_NODShiLtJ_G0011463.1 mouse_genomes_project 2 26468623 26469318 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017759.1 MGP_NODShiLtJ_G0015354.1 mouse_genomes_project 2 178378957 178395094 - Gm14204 processed_transcript processed_transcript MGP_NODShiLtJ_T0017760.1 MGP_NODShiLtJ_G0015354.1 mouse_genomes_project 2 178381654 178395158 - Gm14204 processed_transcript processed_transcript MGP_NODShiLtJ_T0017761.1 MGP_NODShiLtJ_G0015354.1 mouse_genomes_project 2 178386512 178395041 - Gm14204 processed_transcript processed_transcript MGP_NODShiLtJ_T0017762.1 MGP_NODShiLtJ_G0015354.1 mouse_genomes_project 2 178386651 178395025 - Gm14204 processed_transcript processed_transcript MGP_NODShiLtJ_T0013744.1 MGP_NODShiLtJ_G0011852.1 mouse_genomes_project 2 187068158 187068654 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058139.1 MGP_NODShiLtJ_G0026529.1 mouse_genomes_project 2 173559082 173588919 + MGP_NODShiLtJ_P0058139 Bpifb1 protein_coding protein_coding MGP_NODShiLtJ_T0058140.1 MGP_NODShiLtJ_G0026529.1 mouse_genomes_project 2 173559087 173588892 + Bpifb1 protein_coding retained_intron MGP_NODShiLtJ_T0058141.1 MGP_NODShiLtJ_G0026529.1 mouse_genomes_project 2 173568005 173588893 + MGP_NODShiLtJ_P0058141 Bpifb1 protein_coding protein_coding MGP_NODShiLtJ_T0013393.1 MGP_NODShiLtJ_G0011501.1 mouse_genomes_project 2 41169008 41169443 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055940.1 MGP_NODShiLtJ_G0025996.1 mouse_genomes_project 2 104007479 104093610 - MGP_NODShiLtJ_P0055940 Prdm11 protein_coding protein_coding MGP_NODShiLtJ_T0055941.1 MGP_NODShiLtJ_G0025996.1 mouse_genomes_project 2 104018507 104094183 - MGP_NODShiLtJ_P0055941 Prdm11 protein_coding protein_coding MGP_NODShiLtJ_T0055942.1 MGP_NODShiLtJ_G0025996.1 mouse_genomes_project 2 104029696 104060117 - MGP_NODShiLtJ_P0055942 Prdm11 protein_coding protein_coding MGP_NODShiLtJ_T0055943.1 MGP_NODShiLtJ_G0025996.1 mouse_genomes_project 2 104054580 104059281 - Prdm11 protein_coding processed_transcript MGP_NODShiLtJ_T0055944.1 MGP_NODShiLtJ_G0025996.1 mouse_genomes_project 2 104057997 104094206 - MGP_NODShiLtJ_P0055944 Prdm11 protein_coding protein_coding MGP_NODShiLtJ_T0013387.1 MGP_NODShiLtJ_G0011495.1 mouse_genomes_project 2 40157167 40157483 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013439.1 MGP_NODShiLtJ_G0011547.1 mouse_genomes_project 2 63982654 63983517 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055639.1 MGP_NODShiLtJ_G0025950.1 mouse_genomes_project 2 100866277 100867192 - MGP_NODShiLtJ_P0055639 Olfr1270 protein_coding protein_coding MGP_NODShiLtJ_T0099151.1 MGP_NODShiLtJ_G0037545.1 mouse_genomes_project 2 203295027 203295134 + Gm25879 snRNA snRNA MGP_NODShiLtJ_T0057296.1 MGP_NODShiLtJ_G0026308.1 mouse_genomes_project 2 146200909 146214177 - MGP_NODShiLtJ_P0057296 Pdyn protein_coding protein_coding MGP_NODShiLtJ_T0057297.1 MGP_NODShiLtJ_G0026308.1 mouse_genomes_project 2 146202840 146213002 - MGP_NODShiLtJ_P0057297 Pdyn protein_coding protein_coding MGP_NODShiLtJ_T0057298.1 MGP_NODShiLtJ_G0026308.1 mouse_genomes_project 2 146212329 146214188 - Pdyn protein_coding retained_intron MGP_NODShiLtJ_T0013507.1 MGP_NODShiLtJ_G0011615.1 mouse_genomes_project 2 88765376 88766504 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058324.1 MGP_NODShiLtJ_G0026568.1 mouse_genomes_project 2 175493649 175495676 + MGP_NODShiLtJ_P0058324 Gm15557 protein_coding protein_coding MGP_NODShiLtJ_T0057923.1 MGP_NODShiLtJ_G0026460.1 mouse_genomes_project 2 170652682 170670041 + MGP_NODShiLtJ_P0057923 Sdcbp2 protein_coding protein_coding MGP_NODShiLtJ_T0007088.1 MGP_NODShiLtJ_G0005809.1 mouse_genomes_project 2 17660711 17663294 - Carlr lincRNA lincRNA MGP_NODShiLtJ_T0059599.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203187708 203200668 - MGP_NODShiLtJ_P0059599 Uckl1 protein_coding protein_coding MGP_NODShiLtJ_T0059600.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203187712 203188951 - MGP_NODShiLtJ_P0059600 Uckl1 protein_coding protein_coding MGP_NODShiLtJ_T0059601.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203187715 203188361 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0059602.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203187726 203200672 - MGP_NODShiLtJ_P0059602 Uckl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059603.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203187728 203188445 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0059604.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203187794 203191104 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0059605.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203188177 203191691 - MGP_NODShiLtJ_P0059605 Uckl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059606.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203188216 203191691 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0059607.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203188327 203189939 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0059608.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203188413 203191700 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0059609.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203188569 203193040 - Uckl1 protein_coding processed_transcript MGP_NODShiLtJ_T0059610.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203188924 203190722 - Uckl1 protein_coding processed_transcript MGP_NODShiLtJ_T0059611.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203190888 203193064 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0059612.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203191816 203203588 - MGP_NODShiLtJ_P0059612 Uckl1 protein_coding protein_coding MGP_NODShiLtJ_T0059613.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203191861 203193398 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0059614.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203191872 203197516 - MGP_NODShiLtJ_P0059614 Uckl1 protein_coding protein_coding MGP_NODShiLtJ_T0059615.1 MGP_NODShiLtJ_G0026844.1 mouse_genomes_project 2 203192848 203200678 - Uckl1 protein_coding retained_intron MGP_NODShiLtJ_T0053607.1 MGP_NODShiLtJ_G0025416.1 mouse_genomes_project 2 31062061 31069368 - MGP_NODShiLtJ_P0053607 Tor1a protein_coding protein_coding MGP_NODShiLtJ_T0053608.1 MGP_NODShiLtJ_G0025416.1 mouse_genomes_project 2 31062114 31069307 - Tor1a protein_coding retained_intron MGP_NODShiLtJ_T0053609.1 MGP_NODShiLtJ_G0025416.1 mouse_genomes_project 2 31062446 31065283 - Tor1a protein_coding retained_intron MGP_NODShiLtJ_T0053610.1 MGP_NODShiLtJ_G0025416.1 mouse_genomes_project 2 31062487 31065310 - Tor1a protein_coding retained_intron MGP_NODShiLtJ_T0053611.1 MGP_NODShiLtJ_G0025416.1 mouse_genomes_project 2 31068345 31069323 - Tor1a protein_coding retained_intron MGP_NODShiLtJ_T0057681.1 MGP_NODShiLtJ_G0026394.1 mouse_genomes_project 2 162092128 162134968 - MGP_NODShiLtJ_P0057681 Bfsp1 protein_coding protein_coding MGP_NODShiLtJ_T0057682.1 MGP_NODShiLtJ_G0026394.1 mouse_genomes_project 2 162092128 162134738 - MGP_NODShiLtJ_P0057682 Bfsp1 protein_coding protein_coding MGP_NODShiLtJ_T0057153.1 MGP_NODShiLtJ_G0026270.1 mouse_genomes_project 2 143634377 143641546 - MGP_NODShiLtJ_P0057153 Ciao1 protein_coding protein_coding MGP_NODShiLtJ_T0057154.1 MGP_NODShiLtJ_G0026270.1 mouse_genomes_project 2 143636784 143639972 - Ciao1 protein_coding retained_intron MGP_NODShiLtJ_T0057155.1 MGP_NODShiLtJ_G0026270.1 mouse_genomes_project 2 143636911 143641546 - MGP_NODShiLtJ_P0057155 Ciao1 protein_coding protein_coding MGP_NODShiLtJ_T0057156.1 MGP_NODShiLtJ_G0026270.1 mouse_genomes_project 2 143639781 143641546 - MGP_NODShiLtJ_P0057156 Ciao1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054018.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35077748 35177249 - MGP_NODShiLtJ_P0054018 Gapvd1 protein_coding protein_coding MGP_NODShiLtJ_T0054019.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35080143 35175336 - MGP_NODShiLtJ_P0054019 Gapvd1 protein_coding protein_coding MGP_NODShiLtJ_T0054020.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35080143 35175336 - MGP_NODShiLtJ_P0054020 Gapvd1 protein_coding protein_coding MGP_NODShiLtJ_T0054021.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35080641 35112499 - MGP_NODShiLtJ_P0054021 Gapvd1 protein_coding protein_coding MGP_NODShiLtJ_T0054022.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35081052 35086506 - MGP_NODShiLtJ_P0054022 Gapvd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054023.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35081195 35175238 - MGP_NODShiLtJ_P0054023 Gapvd1 protein_coding protein_coding MGP_NODShiLtJ_T0054024.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35098967 35112759 - Gapvd1 protein_coding processed_transcript MGP_NODShiLtJ_T0054025.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35103951 35109228 - Gapvd1 protein_coding retained_intron MGP_NODShiLtJ_T0054026.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35107998 35144123 - MGP_NODShiLtJ_P0054026 Gapvd1 protein_coding protein_coding MGP_NODShiLtJ_T0054027.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35108019 35144026 - MGP_NODShiLtJ_P0054027 Gapvd1 protein_coding protein_coding MGP_NODShiLtJ_T0054028.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35112415 35122520 - MGP_NODShiLtJ_P0054028 Gapvd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054029.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35112459 35122635 - Gapvd1 protein_coding processed_transcript MGP_NODShiLtJ_T0054030.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35119529 35123031 - Gapvd1 protein_coding retained_intron MGP_NODShiLtJ_T0054031.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35140597 35175200 - Gapvd1 protein_coding retained_intron MGP_NODShiLtJ_T0054032.1 MGP_NODShiLtJ_G0025477.1 mouse_genomes_project 2 35144096 35175186 - MGP_NODShiLtJ_P0054032 Gapvd1 protein_coding protein_coding MGP_NODShiLtJ_T0098303.1 MGP_NODShiLtJ_G0036709.1 mouse_genomes_project 2 4226640 4227873 - Gm10115 sense_intronic sense_intronic MGP_NODShiLtJ_T0013503.1 MGP_NODShiLtJ_G0011611.1 mouse_genomes_project 2 87947590 87948413 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010364.1 MGP_NODShiLtJ_G0008497.1 mouse_genomes_project 2 171956192 171956294 - Gm23802 miRNA miRNA MGP_NODShiLtJ_T0059196.1 MGP_NODShiLtJ_G0026751.1 mouse_genomes_project 2 191077065 191100587 - MGP_NODShiLtJ_P0059196 Zfp217 protein_coding protein_coding MGP_NODShiLtJ_T0059197.1 MGP_NODShiLtJ_G0026751.1 mouse_genomes_project 2 191077068 191112759 - MGP_NODShiLtJ_P0059197 Zfp217 protein_coding protein_coding MGP_NODShiLtJ_T0059198.1 MGP_NODShiLtJ_G0026751.1 mouse_genomes_project 2 191088754 191100587 - Zfp217 protein_coding processed_transcript MGP_NODShiLtJ_T0059199.1 MGP_NODShiLtJ_G0026751.1 mouse_genomes_project 2 191089040 191103228 - Zfp217 protein_coding processed_transcript MGP_NODShiLtJ_T0059200.1 MGP_NODShiLtJ_G0026751.1 mouse_genomes_project 2 191089140 191120324 - Zfp217 protein_coding processed_transcript MGP_NODShiLtJ_T0100341.1 MGP_NODShiLtJ_G0038735.1 mouse_genomes_project 2 8893332 8893461 - Gm23877 snoRNA snoRNA MGP_NODShiLtJ_T0055549.1 MGP_NODShiLtJ_G0025873.1 mouse_genomes_project 2 98222276 98222873 - MGP_NODShiLtJ_P0055549 protein_coding protein_coding MGP_NODShiLtJ_T0057837.1 MGP_NODShiLtJ_G0026435.1 mouse_genomes_project 2 167466979 167470564 + MGP_NODShiLtJ_P0057837 Cst9 protein_coding protein_coding MGP_NODShiLtJ_T0100364.1 MGP_NODShiLtJ_G0038758.1 mouse_genomes_project 2 49476546 49476663 - Gm25264 snoRNA snoRNA MGP_NODShiLtJ_T0101103.1 MGP_NODShiLtJ_G0039451.1 mouse_genomes_project 2 147401853 147404406 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0059142.1 MGP_NODShiLtJ_G0026741.1 mouse_genomes_project 2 188981146 189030868 - MGP_NODShiLtJ_P0059142 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0101313.1 MGP_NODShiLtJ_G0039567.1 mouse_genomes_project 2 37953618 37958365 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101314.1 MGP_NODShiLtJ_G0039567.1 mouse_genomes_project 2 37957933 37958878 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0057571.1 MGP_NODShiLtJ_G0026370.1 mouse_genomes_project 2 151607407 151662035 - MGP_NODShiLtJ_P0057571 Tmx4 protein_coding protein_coding MGP_NODShiLtJ_T0057572.1 MGP_NODShiLtJ_G0026370.1 mouse_genomes_project 2 151612221 151662022 - Tmx4 protein_coding processed_transcript MGP_NODShiLtJ_T0057573.1 MGP_NODShiLtJ_G0026370.1 mouse_genomes_project 2 151619680 151661931 - MGP_NODShiLtJ_P0057573 Tmx4 protein_coding protein_coding MGP_NODShiLtJ_T0057574.1 MGP_NODShiLtJ_G0026370.1 mouse_genomes_project 2 151656471 151661980 - MGP_NODShiLtJ_P0057574 Tmx4 protein_coding protein_coding MGP_NODShiLtJ_T0010337.1 MGP_NODShiLtJ_G0008470.1 mouse_genomes_project 2 117047455 117047551 + Gm22757 miRNA miRNA MGP_NODShiLtJ_T0013738.1 MGP_NODShiLtJ_G0011846.1 mouse_genomes_project 2 183075975 183076665 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058594.1 MGP_NODShiLtJ_G0026609.1 mouse_genomes_project 2 177875359 177905265 - MGP_NODShiLtJ_P0058594 Tgm2 protein_coding protein_coding MGP_NODShiLtJ_T0058595.1 MGP_NODShiLtJ_G0026609.1 mouse_genomes_project 2 177886284 177905222 - MGP_NODShiLtJ_P0058595 Tgm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058596.1 MGP_NODShiLtJ_G0026609.1 mouse_genomes_project 2 177889320 177905195 - Tgm2 protein_coding retained_intron MGP_NODShiLtJ_T0058597.1 MGP_NODShiLtJ_G0026609.1 mouse_genomes_project 2 177893262 177898665 - Tgm2 protein_coding processed_transcript MGP_NODShiLtJ_T0055935.1 MGP_NODShiLtJ_G0025993.1 mouse_genomes_project 2 103447102 103454146 - MGP_NODShiLtJ_P0055935 Slc35c1 protein_coding protein_coding MGP_NODShiLtJ_T0055936.1 MGP_NODShiLtJ_G0025993.1 mouse_genomes_project 2 103447105 103454890 - MGP_NODShiLtJ_P0055936 Slc35c1 protein_coding protein_coding MGP_NODShiLtJ_T0055937.1 MGP_NODShiLtJ_G0025993.1 mouse_genomes_project 2 103453037 103454061 - MGP_NODShiLtJ_P0055937 Slc35c1 protein_coding protein_coding MGP_NODShiLtJ_T0013356.1 MGP_NODShiLtJ_G0011464.1 mouse_genomes_project 2 26798038 26798916 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059246.1 MGP_NODShiLtJ_G0026768.1 mouse_genomes_project 2 194222233 194238061 + Spo11 protein_coding retained_intron MGP_NODShiLtJ_T0059247.1 MGP_NODShiLtJ_G0026768.1 mouse_genomes_project 2 194224347 194238055 + MGP_NODShiLtJ_P0059247 Spo11 protein_coding protein_coding MGP_NODShiLtJ_T0059248.1 MGP_NODShiLtJ_G0026768.1 mouse_genomes_project 2 194224354 194238057 + MGP_NODShiLtJ_P0059248 Spo11 protein_coding protein_coding MGP_NODShiLtJ_T0059249.1 MGP_NODShiLtJ_G0026768.1 mouse_genomes_project 2 194224354 194238066 + MGP_NODShiLtJ_P0059249 Spo11 protein_coding protein_coding MGP_NODShiLtJ_T0059250.1 MGP_NODShiLtJ_G0026768.1 mouse_genomes_project 2 194230348 194236532 + Spo11 protein_coding processed_transcript MGP_NODShiLtJ_T0007087.1 MGP_NODShiLtJ_G0005808.1 mouse_genomes_project 2 15811938 15815683 - Gm13322 lincRNA lincRNA MGP_NODShiLtJ_T0013455.1 MGP_NODShiLtJ_G0011563.1 mouse_genomes_project 2 70696247 70697025 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052771.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931678 24962109 - MGP_NODShiLtJ_P0052771 Grin1 protein_coding protein_coding MGP_NODShiLtJ_T0052772.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931678 24962134 - MGP_NODShiLtJ_P0052772 Grin1 protein_coding protein_coding MGP_NODShiLtJ_T0052773.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931678 24962109 - MGP_NODShiLtJ_P0052773 Grin1 protein_coding protein_coding MGP_NODShiLtJ_T0052774.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931678 24962109 - MGP_NODShiLtJ_P0052774 Grin1 protein_coding protein_coding MGP_NODShiLtJ_T0052775.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931678 24962109 - MGP_NODShiLtJ_P0052775 Grin1 protein_coding protein_coding MGP_NODShiLtJ_T0052776.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931678 24962134 - MGP_NODShiLtJ_P0052776 Grin1 protein_coding protein_coding MGP_NODShiLtJ_T0052777.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931678 24962201 - MGP_NODShiLtJ_P0052777 Grin1 protein_coding protein_coding MGP_NODShiLtJ_T0052778.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931678 24962134 - MGP_NODShiLtJ_P0052778 Grin1 protein_coding protein_coding MGP_NODShiLtJ_T0052779.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24931854 24946798 - Grin1 protein_coding processed_transcript MGP_NODShiLtJ_T0052780.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24932555 24937177 - Grin1 protein_coding processed_transcript MGP_NODShiLtJ_T0052781.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24946493 24948114 - Grin1 protein_coding processed_transcript MGP_NODShiLtJ_T0052782.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24946596 24948411 - Grin1 protein_coding processed_transcript MGP_NODShiLtJ_T0052783.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24953814 24962140 - Grin1 protein_coding processed_transcript MGP_NODShiLtJ_T0052784.1 MGP_NODShiLtJ_G0025276.1 mouse_genomes_project 2 24957414 24962177 - Grin1 protein_coding processed_transcript MGP_NODShiLtJ_T0010262.1 MGP_NODShiLtJ_G0008395.1 mouse_genomes_project 2 8362833 8362929 + Mir669o miRNA miRNA MGP_NODShiLtJ_T0101801.1 MGP_NODShiLtJ_G0039969.1 mouse_genomes_project 2 94532581 94533511 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0052208.1 MGP_NODShiLtJ_G0025180.1 mouse_genomes_project 2 9065667 9164980 + Prkcq protein_coding retained_intron MGP_NODShiLtJ_T0052209.1 MGP_NODShiLtJ_G0025180.1 mouse_genomes_project 2 9065865 9187049 + Prkcq protein_coding retained_intron MGP_NODShiLtJ_T0052210.1 MGP_NODShiLtJ_G0025180.1 mouse_genomes_project 2 9120397 9204220 + MGP_NODShiLtJ_P0052210 Prkcq protein_coding protein_coding MGP_NODShiLtJ_T0052211.1 MGP_NODShiLtJ_G0025180.1 mouse_genomes_project 2 9124297 9203110 + MGP_NODShiLtJ_P0052211 Prkcq protein_coding protein_coding MGP_NODShiLtJ_T0052212.1 MGP_NODShiLtJ_G0025180.1 mouse_genomes_project 2 9147844 9155658 + Prkcq protein_coding retained_intron MGP_NODShiLtJ_T0052213.1 MGP_NODShiLtJ_G0025180.1 mouse_genomes_project 2 9151302 9203689 + Prkcq protein_coding processed_transcript MGP_NODShiLtJ_T0054735.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71856347 72000271 + MGP_NODShiLtJ_P0054735 Scn2a1 protein_coding protein_coding MGP_NODShiLtJ_T0054736.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71856347 71928189 + MGP_NODShiLtJ_P0054736 Scn2a1 protein_coding protein_coding MGP_NODShiLtJ_T0054737.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71856387 71858841 + Scn2a1 protein_coding retained_intron MGP_NODShiLtJ_T0054738.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71905529 71908619 + Scn2a1 protein_coding retained_intron MGP_NODShiLtJ_T0054739.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71905605 71997200 + MGP_NODShiLtJ_P0054739 Scn2a1 protein_coding protein_coding MGP_NODShiLtJ_T0054740.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71907266 72000271 + MGP_NODShiLtJ_P0054740 Scn2a1 protein_coding protein_coding MGP_NODShiLtJ_T0054741.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71919106 71920693 + Scn2a1 protein_coding retained_intron MGP_NODShiLtJ_T0054742.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71957838 71968726 + MGP_NODShiLtJ_P0054742 Scn2a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054743.1 MGP_NODShiLtJ_G0025616.1 mouse_genomes_project 2 71957861 71968677 + MGP_NODShiLtJ_P0054743 Scn2a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013621.1 MGP_NODShiLtJ_G0011729.1 mouse_genomes_project 2 135246065 135246451 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057282.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146107658 146124811 + Sirpa protein_coding processed_transcript MGP_NODShiLtJ_T0057283.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146107662 146124814 + Sirpa protein_coding processed_transcript MGP_NODShiLtJ_T0057284.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146107662 146130206 + MGP_NODShiLtJ_P0057284 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057285.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146107662 146146170 + MGP_NODShiLtJ_P0057285 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057286.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146107662 146146170 + MGP_NODShiLtJ_P0057286 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057287.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146107688 146125003 + Sirpa protein_coding processed_transcript MGP_NODShiLtJ_T0057288.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146107737 146146178 + MGP_NODShiLtJ_P0057288 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057289.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146108018 146146170 + MGP_NODShiLtJ_P0057289 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057290.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146108028 146146178 + MGP_NODShiLtJ_P0057290 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057291.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146108379 146146178 + MGP_NODShiLtJ_P0057291 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057292.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146108386 146144539 + Sirpa protein_coding processed_transcript MGP_NODShiLtJ_T0057293.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146108392 146144247 + MGP_NODShiLtJ_P0057293 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057294.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146108437 146144134 + MGP_NODShiLtJ_P0057294 Sirpa protein_coding protein_coding MGP_NODShiLtJ_T0057295.1 MGP_NODShiLtJ_G0026307.1 mouse_genomes_project 2 146134631 146141988 + Sirpa protein_coding retained_intron MGP_NODShiLtJ_T0007065.1 MGP_NODShiLtJ_G0005790.1 mouse_genomes_project 2 948372 951686 - Gm13191 lincRNA lincRNA MGP_NODShiLtJ_T0004123.1 MGP_NODShiLtJ_G0003638.1 mouse_genomes_project 2 193188456 193192253 + Gm14271 antisense antisense MGP_NODShiLtJ_T0099125.1 MGP_NODShiLtJ_G0037519.1 mouse_genomes_project 2 132614737 132614901 + Gm25189 snRNA snRNA MGP_NODShiLtJ_T0004079.1 MGP_NODShiLtJ_G0003603.1 mouse_genomes_project 2 175074195 175084105 - Acss2os antisense antisense MGP_NODShiLtJ_T0007070.1 MGP_NODShiLtJ_G0005794.1 mouse_genomes_project 2 3478126 3479462 - Gm13383 lincRNA lincRNA MGP_NODShiLtJ_T0013561.1 MGP_NODShiLtJ_G0011669.1 mouse_genomes_project 2 108822905 108824306 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055602.1 MGP_NODShiLtJ_G0025923.1 mouse_genomes_project 2 99869957 99870905 - MGP_NODShiLtJ_P0055602 Olfr1238 protein_coding protein_coding MGP_NODShiLtJ_T0003889.1 MGP_NODShiLtJ_G0003467.1 mouse_genomes_project 2 31331231 31333110 - Gm13405 antisense antisense MGP_NODShiLtJ_T0058122.1 MGP_NODShiLtJ_G0026523.1 mouse_genomes_project 2 173252360 173257772 + Bpifb4 protein_coding retained_intron MGP_NODShiLtJ_T0058123.1 MGP_NODShiLtJ_G0026523.1 mouse_genomes_project 2 173252369 173279628 + MGP_NODShiLtJ_P0058123 Bpifb4 protein_coding protein_coding MGP_NODShiLtJ_T0058124.1 MGP_NODShiLtJ_G0026523.1 mouse_genomes_project 2 173256032 173279391 + MGP_NODShiLtJ_P0058124 Bpifb4 protein_coding protein_coding MGP_NODShiLtJ_T0058125.1 MGP_NODShiLtJ_G0026523.1 mouse_genomes_project 2 173257438 173259998 + Bpifb4 protein_coding retained_intron MGP_NODShiLtJ_T0058126.1 MGP_NODShiLtJ_G0026523.1 mouse_genomes_project 2 173259083 173279391 + MGP_NODShiLtJ_P0058126 Bpifb4 protein_coding protein_coding MGP_NODShiLtJ_T0099134.1 MGP_NODShiLtJ_G0037528.1 mouse_genomes_project 2 150145622 150145681 + Gm27449 snRNA snRNA MGP_NODShiLtJ_T0057947.1 MGP_NODShiLtJ_G0026467.1 mouse_genomes_project 2 171080449 171091295 - MGP_NODShiLtJ_P0057947 Fam110a protein_coding protein_coding MGP_NODShiLtJ_T0057948.1 MGP_NODShiLtJ_G0026467.1 mouse_genomes_project 2 171080449 171084980 - MGP_NODShiLtJ_P0057948 Fam110a protein_coding protein_coding MGP_NODShiLtJ_T0057949.1 MGP_NODShiLtJ_G0026467.1 mouse_genomes_project 2 171080449 171085011 - MGP_NODShiLtJ_P0057949 Fam110a protein_coding protein_coding MGP_NODShiLtJ_T0057950.1 MGP_NODShiLtJ_G0026467.1 mouse_genomes_project 2 171080788 171084439 - MGP_NODShiLtJ_P0057950 Fam110a protein_coding protein_coding MGP_NODShiLtJ_T0059426.1 MGP_NODShiLtJ_G0026814.1 mouse_genomes_project 2 202130029 202156697 + MGP_NODShiLtJ_P0059426 Col9a3 protein_coding protein_coding MGP_NODShiLtJ_T0059427.1 MGP_NODShiLtJ_G0026814.1 mouse_genomes_project 2 202130461 202156693 + MGP_NODShiLtJ_P0059427 Col9a3 protein_coding protein_coding MGP_NODShiLtJ_T0059428.1 MGP_NODShiLtJ_G0026814.1 mouse_genomes_project 2 202131045 202139396 + Col9a3 protein_coding retained_intron MGP_NODShiLtJ_T0059429.1 MGP_NODShiLtJ_G0026814.1 mouse_genomes_project 2 202136803 202147038 + Col9a3 protein_coding retained_intron MGP_NODShiLtJ_T0059430.1 MGP_NODShiLtJ_G0026814.1 mouse_genomes_project 2 202147739 202155806 + Col9a3 protein_coding retained_intron MGP_NODShiLtJ_T0059431.1 MGP_NODShiLtJ_G0026814.1 mouse_genomes_project 2 202149892 202156110 + Col9a3 protein_coding retained_intron MGP_NODShiLtJ_T0055842.1 MGP_NODShiLtJ_G0025979.1 mouse_genomes_project 2 102602971 102641373 - MGP_NODShiLtJ_P0055842 Atg13 protein_coding protein_coding MGP_NODShiLtJ_T0055843.1 MGP_NODShiLtJ_G0025979.1 mouse_genomes_project 2 102602972 102641316 - MGP_NODShiLtJ_P0055843 Atg13 protein_coding protein_coding MGP_NODShiLtJ_T0055844.1 MGP_NODShiLtJ_G0025979.1 mouse_genomes_project 2 102604671 102610550 - Atg13 protein_coding processed_transcript MGP_NODShiLtJ_T0055845.1 MGP_NODShiLtJ_G0025979.1 mouse_genomes_project 2 102607758 102613573 - Atg13 protein_coding processed_transcript MGP_NODShiLtJ_T0055846.1 MGP_NODShiLtJ_G0025979.1 mouse_genomes_project 2 102617151 102636539 - Atg13 protein_coding processed_transcript MGP_NODShiLtJ_T0053436.1 MGP_NODShiLtJ_G0025391.1 mouse_genomes_project 2 30125864 30127940 - Zdhhc12 protein_coding processed_transcript MGP_NODShiLtJ_T0053437.1 MGP_NODShiLtJ_G0025391.1 mouse_genomes_project 2 30125864 30128569 - MGP_NODShiLtJ_P0053437 Zdhhc12 protein_coding protein_coding MGP_NODShiLtJ_T0053438.1 MGP_NODShiLtJ_G0025391.1 mouse_genomes_project 2 30125871 30128556 - MGP_NODShiLtJ_P0053438 Zdhhc12 protein_coding protein_coding MGP_NODShiLtJ_T0053439.1 MGP_NODShiLtJ_G0025391.1 mouse_genomes_project 2 30126251 30128537 - Zdhhc12 protein_coding retained_intron MGP_NODShiLtJ_T0101812.1 MGP_NODShiLtJ_G0039980.1 mouse_genomes_project 2 95800340 95801227 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0052392.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 15989278 16408370 - MGP_NODShiLtJ_P0052392 protein_coding protein_coding MGP_NODShiLtJ_T0052393.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 15989423 16126782 - MGP_NODShiLtJ_P0052393 protein_coding protein_coding MGP_NODShiLtJ_T0052394.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 15994063 16010869 - protein_coding processed_transcript MGP_NODShiLtJ_T0052395.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 15994063 16121812 - MGP_NODShiLtJ_P0052395 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052396.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 15996124 16195669 - MGP_NODShiLtJ_P0052396 protein_coding protein_coding MGP_NODShiLtJ_T0052397.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16026344 16044472 - protein_coding processed_transcript MGP_NODShiLtJ_T0052398.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16027991 16044515 - protein_coding processed_transcript MGP_NODShiLtJ_T0052399.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16028248 16044541 - MGP_NODShiLtJ_P0052399 protein_coding protein_coding MGP_NODShiLtJ_T0052400.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16030968 16044502 - protein_coding processed_transcript MGP_NODShiLtJ_T0052401.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16046435 16128338 - MGP_NODShiLtJ_P0052401 protein_coding protein_coding MGP_NODShiLtJ_T0052402.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16046438 16128340 - MGP_NODShiLtJ_P0052402 protein_coding protein_coding MGP_NODShiLtJ_T0052403.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16050501 16121895 - MGP_NODShiLtJ_P0052403 protein_coding protein_coding MGP_NODShiLtJ_T0052404.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16091015 16194013 - protein_coding processed_transcript MGP_NODShiLtJ_T0052405.1 MGP_NODShiLtJ_G0025207.1 mouse_genomes_project 2 16404712 16408791 - protein_coding processed_transcript MGP_NODShiLtJ_T0013615.1 MGP_NODShiLtJ_G0011723.1 mouse_genomes_project 2 132607384 132607943 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058179.1 MGP_NODShiLtJ_G0026540.1 mouse_genomes_project 2 174008767 174027736 - MGP_NODShiLtJ_P0058179 Pxmp4 protein_coding protein_coding MGP_NODShiLtJ_T0058180.1 MGP_NODShiLtJ_G0026540.1 mouse_genomes_project 2 174019067 174027716 - MGP_NODShiLtJ_P0058180 Pxmp4 protein_coding protein_coding MGP_NODShiLtJ_T0100407.1 MGP_NODShiLtJ_G0038801.1 mouse_genomes_project 2 168407343 168407435 - Gm24551 snoRNA snoRNA MGP_NODShiLtJ_T0010345.1 MGP_NODShiLtJ_G0008478.1 mouse_genomes_project 2 135630824 135630887 + Mir7665 miRNA miRNA MGP_NODShiLtJ_T0058586.1 MGP_NODShiLtJ_G0026608.1 mouse_genomes_project 2 177778326 177830882 + MGP_NODShiLtJ_P0058586 Rprd1b protein_coding protein_coding MGP_NODShiLtJ_T0058587.1 MGP_NODShiLtJ_G0026608.1 mouse_genomes_project 2 177778337 177798539 + Rprd1b protein_coding retained_intron MGP_NODShiLtJ_T0058588.1 MGP_NODShiLtJ_G0026608.1 mouse_genomes_project 2 177778521 177830882 + Rprd1b protein_coding processed_transcript MGP_NODShiLtJ_T0058589.1 MGP_NODShiLtJ_G0026608.1 mouse_genomes_project 2 177778530 177830882 + MGP_NODShiLtJ_P0058589 Rprd1b protein_coding protein_coding MGP_NODShiLtJ_T0058590.1 MGP_NODShiLtJ_G0026608.1 mouse_genomes_project 2 177778550 177830882 + MGP_NODShiLtJ_P0058590 Rprd1b protein_coding protein_coding MGP_NODShiLtJ_T0058591.1 MGP_NODShiLtJ_G0026608.1 mouse_genomes_project 2 177778628 177891238 + MGP_NODShiLtJ_P0058591 Rprd1b protein_coding protein_coding MGP_NODShiLtJ_T0058592.1 MGP_NODShiLtJ_G0026608.1 mouse_genomes_project 2 177793251 177827748 + MGP_NODShiLtJ_P0058592 Rprd1b protein_coding protein_coding MGP_NODShiLtJ_T0058593.1 MGP_NODShiLtJ_G0026608.1 mouse_genomes_project 2 177797787 177823190 + MGP_NODShiLtJ_P0058593 Rprd1b protein_coding protein_coding MGP_NODShiLtJ_T0055301.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93199861 93245159 - MGP_NODShiLtJ_P0055301 Tfpi protein_coding protein_coding MGP_NODShiLtJ_T0055302.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93199861 93246655 - MGP_NODShiLtJ_P0055302 Tfpi protein_coding protein_coding MGP_NODShiLtJ_T0055303.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93199866 93203398 - Tfpi protein_coding processed_transcript MGP_NODShiLtJ_T0055304.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93199866 93245549 - MGP_NODShiLtJ_P0055304 Tfpi protein_coding protein_coding MGP_NODShiLtJ_T0055305.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93208931 93248129 - MGP_NODShiLtJ_P0055305 Tfpi protein_coding protein_coding MGP_NODShiLtJ_T0055306.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93208931 93248141 - MGP_NODShiLtJ_P0055306 Tfpi protein_coding protein_coding MGP_NODShiLtJ_T0055307.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93208931 93248114 - MGP_NODShiLtJ_P0055307 Tfpi protein_coding protein_coding MGP_NODShiLtJ_T0055308.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93208931 93228657 - MGP_NODShiLtJ_P0055308 Tfpi protein_coding protein_coding MGP_NODShiLtJ_T0055309.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93209514 93245178 - MGP_NODShiLtJ_P0055309 Tfpi protein_coding protein_coding MGP_NODShiLtJ_T0055310.1 MGP_NODShiLtJ_G0025734.1 mouse_genomes_project 2 93212860 93245174 - Tfpi protein_coding processed_transcript MGP_NODShiLtJ_T0004018.1 MGP_NODShiLtJ_G0003558.1 mouse_genomes_project 2 138683670 138689186 - Bloc1s6os antisense antisense MGP_NODShiLtJ_T0004125.1 MGP_NODShiLtJ_G0003640.1 mouse_genomes_project 2 194274050 194282944 - Gm14453 antisense antisense MGP_NODShiLtJ_T0003905.1 MGP_NODShiLtJ_G0003480.1 mouse_genomes_project 2 34663575 34685404 + C79798 antisense antisense MGP_NODShiLtJ_T0013347.1 MGP_NODShiLtJ_G0011455.1 mouse_genomes_project 2 23693422 23694881 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059451.1 MGP_NODShiLtJ_G0026819.1 mouse_genomes_project 2 202322482 202325002 - MGP_NODShiLtJ_P0059451 Bhlhe23 protein_coding protein_coding MGP_NODShiLtJ_T0058464.1 MGP_NODShiLtJ_G0026585.1 mouse_genomes_project 2 176132982 176154586 + MGP_NODShiLtJ_P0058464 Aar2 protein_coding protein_coding MGP_NODShiLtJ_T0058465.1 MGP_NODShiLtJ_G0026585.1 mouse_genomes_project 2 176132994 176155403 + MGP_NODShiLtJ_P0058465 Aar2 protein_coding protein_coding MGP_NODShiLtJ_T0058466.1 MGP_NODShiLtJ_G0026585.1 mouse_genomes_project 2 176133006 176136099 + Aar2 protein_coding processed_transcript MGP_NODShiLtJ_T0058467.1 MGP_NODShiLtJ_G0026585.1 mouse_genomes_project 2 176133008 176136480 + MGP_NODShiLtJ_P0058467 Aar2 protein_coding protein_coding MGP_NODShiLtJ_T0058468.1 MGP_NODShiLtJ_G0026585.1 mouse_genomes_project 2 176133022 176136233 + MGP_NODShiLtJ_P0058468 Aar2 protein_coding protein_coding MGP_NODShiLtJ_T0013300.1 MGP_NODShiLtJ_G0011408.1 mouse_genomes_project 2 7002634 7003064 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054526.1 MGP_NODShiLtJ_G0025584.1 mouse_genomes_project 2 63484099 63574117 - MGP_NODShiLtJ_P0054526 Acvr1c protein_coding protein_coding MGP_NODShiLtJ_T0054527.1 MGP_NODShiLtJ_G0025584.1 mouse_genomes_project 2 63484099 63574117 - MGP_NODShiLtJ_P0054527 Acvr1c protein_coding protein_coding MGP_NODShiLtJ_T0054528.1 MGP_NODShiLtJ_G0025584.1 mouse_genomes_project 2 63484282 63574045 - MGP_NODShiLtJ_P0054528 Acvr1c protein_coding protein_coding MGP_NODShiLtJ_T0054529.1 MGP_NODShiLtJ_G0025584.1 mouse_genomes_project 2 63509709 63542003 - MGP_NODShiLtJ_P0054529 Acvr1c protein_coding protein_coding MGP_NODShiLtJ_T0007073.1 MGP_NODShiLtJ_G0005796.1 mouse_genomes_project 2 4354432 4360612 + Gm26565 lincRNA lincRNA MGP_NODShiLtJ_T0099110.1 MGP_NODShiLtJ_G0037504.1 mouse_genomes_project 2 69320677 69320784 - Gm23503 snRNA snRNA MGP_NODShiLtJ_T0053474.1 MGP_NODShiLtJ_G0025397.1 mouse_genomes_project 2 30278600 30304666 + MGP_NODShiLtJ_P0053474 Gm28035 protein_coding protein_coding MGP_NODShiLtJ_T0053475.1 MGP_NODShiLtJ_G0025397.1 mouse_genomes_project 2 30278607 30304671 + MGP_NODShiLtJ_P0053475 Gm28035 protein_coding protein_coding MGP_NODShiLtJ_T0017642.1 MGP_NODShiLtJ_G0015297.1 mouse_genomes_project 2 78774043 78783951 + Gm13662 processed_transcript processed_transcript MGP_NODShiLtJ_T0052914.1 MGP_NODShiLtJ_G0025297.1 mouse_genomes_project 2 25286097 25295079 - MGP_NODShiLtJ_P0052914 Ccdc183 protein_coding protein_coding MGP_NODShiLtJ_T0052915.1 MGP_NODShiLtJ_G0025297.1 mouse_genomes_project 2 25286155 25295060 - Ccdc183 protein_coding processed_transcript MGP_NODShiLtJ_T0004004.1 MGP_NODShiLtJ_G0003548.1 mouse_genomes_project 2 128979565 128989246 + C130080G10Rik antisense antisense MGP_NODShiLtJ_T0004005.1 MGP_NODShiLtJ_G0003548.1 mouse_genomes_project 2 128979626 128989223 + C130080G10Rik antisense antisense MGP_NODShiLtJ_T0004006.1 MGP_NODShiLtJ_G0003548.1 mouse_genomes_project 2 128980472 128988725 + C130080G10Rik antisense antisense MGP_NODShiLtJ_T0004007.1 MGP_NODShiLtJ_G0003548.1 mouse_genomes_project 2 128981556 128989031 + C130080G10Rik antisense antisense MGP_NODShiLtJ_T0004008.1 MGP_NODShiLtJ_G0003548.1 mouse_genomes_project 2 128981581 128993905 + C130080G10Rik antisense antisense MGP_NODShiLtJ_T0003912.1 MGP_NODShiLtJ_G0003487.1 mouse_genomes_project 2 39681420 39698780 + Nr6a1os antisense antisense MGP_NODShiLtJ_T0003913.1 MGP_NODShiLtJ_G0003487.1 mouse_genomes_project 2 39681500 39715275 + Nr6a1os antisense antisense MGP_NODShiLtJ_T0001074.1 MGP_NODShiLtJ_G0000999.1 mouse_genomes_project 2 167534989 167535355 - TEC TEC MGP_NODShiLtJ_T0053920.1 MGP_NODShiLtJ_G0025461.1 mouse_genomes_project 2 33056600 33058412 + MGP_NODShiLtJ_P0053920 Ptrh1 protein_coding protein_coding MGP_NODShiLtJ_T0053921.1 MGP_NODShiLtJ_G0025461.1 mouse_genomes_project 2 33056630 33057570 + Ptrh1 protein_coding processed_transcript MGP_NODShiLtJ_T0053922.1 MGP_NODShiLtJ_G0025461.1 mouse_genomes_project 2 33056679 33058264 + Ptrh1 protein_coding retained_intron MGP_NODShiLtJ_T0057859.1 MGP_NODShiLtJ_G0026444.1 mouse_genomes_project 2 169092615 169106789 + MGP_NODShiLtJ_P0057859 Gm14139 protein_coding protein_coding MGP_NODShiLtJ_T0013702.1 MGP_NODShiLtJ_G0011810.1 mouse_genomes_project 2 171605100 171605408 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055238.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87602455 87944600 - MGP_NODShiLtJ_P0055238 Pde1a protein_coding protein_coding MGP_NODShiLtJ_T0055239.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87602456 87944495 - MGP_NODShiLtJ_P0055239 Pde1a protein_coding protein_coding MGP_NODShiLtJ_T0055240.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87602458 87944495 - MGP_NODShiLtJ_P0055240 Pde1a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055241.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87602464 87944600 - MGP_NODShiLtJ_P0055241 Pde1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055242.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87604551 87945119 - MGP_NODShiLtJ_P0055242 Pde1a protein_coding protein_coding MGP_NODShiLtJ_T0055243.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87624511 87692842 - MGP_NODShiLtJ_P0055243 Pde1a protein_coding protein_coding MGP_NODShiLtJ_T0055244.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87624511 87692808 - MGP_NODShiLtJ_P0055244 Pde1a protein_coding protein_coding MGP_NODShiLtJ_T0055245.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87624511 87692842 - MGP_NODShiLtJ_P0055245 Pde1a protein_coding protein_coding MGP_NODShiLtJ_T0055246.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87631239 87714372 - MGP_NODShiLtJ_P0055246 Pde1a protein_coding protein_coding MGP_NODShiLtJ_T0055247.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87690404 87834051 - Pde1a protein_coding processed_transcript MGP_NODShiLtJ_T0055248.1 MGP_NODShiLtJ_G0025718.1 mouse_genomes_project 2 87698671 87945119 - Pde1a protein_coding processed_transcript MGP_NODShiLtJ_T0098018.1 MGP_NODShiLtJ_G0036430.1 mouse_genomes_project 2 187232692 187232808 - Gm23152 rRNA rRNA MGP_NODShiLtJ_T0055815.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102439347 102544467 + MGP_NODShiLtJ_P0055815 Ckap5 protein_coding protein_coding MGP_NODShiLtJ_T0055816.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102439563 102468389 + Ckap5 protein_coding processed_transcript MGP_NODShiLtJ_T0055817.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102459347 102478186 + Ckap5 protein_coding retained_intron MGP_NODShiLtJ_T0055818.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102459349 102544465 + MGP_NODShiLtJ_P0055818 Ckap5 protein_coding protein_coding MGP_NODShiLtJ_T0055819.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102459349 102544465 + MGP_NODShiLtJ_P0055819 Ckap5 protein_coding protein_coding MGP_NODShiLtJ_T0055820.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102459360 102544466 + MGP_NODShiLtJ_P0055820 Ckap5 protein_coding protein_coding MGP_NODShiLtJ_T0055821.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102468264 102478189 + Ckap5 protein_coding retained_intron MGP_NODShiLtJ_T0055822.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102509228 102523195 + Ckap5 protein_coding processed_transcript MGP_NODShiLtJ_T0055823.1 MGP_NODShiLtJ_G0025975.1 mouse_genomes_project 2 102510551 102515152 + Ckap5 protein_coding retained_intron MGP_NODShiLtJ_T0055945.1 MGP_NODShiLtJ_G0025997.1 mouse_genomes_project 2 104242327 104254802 + MGP_NODShiLtJ_P0055945 Trp53i11 protein_coding protein_coding MGP_NODShiLtJ_T0055946.1 MGP_NODShiLtJ_G0025997.1 mouse_genomes_project 2 104242327 104257642 + MGP_NODShiLtJ_P0055946 Trp53i11 protein_coding protein_coding MGP_NODShiLtJ_T0055947.1 MGP_NODShiLtJ_G0025997.1 mouse_genomes_project 2 104242340 104255332 + Trp53i11 protein_coding processed_transcript MGP_NODShiLtJ_T0055948.1 MGP_NODShiLtJ_G0025997.1 mouse_genomes_project 2 104242340 104256191 + Trp53i11 protein_coding processed_transcript MGP_NODShiLtJ_T0055949.1 MGP_NODShiLtJ_G0025997.1 mouse_genomes_project 2 104242363 104257632 + MGP_NODShiLtJ_P0055949 Trp53i11 protein_coding protein_coding MGP_NODShiLtJ_T0055950.1 MGP_NODShiLtJ_G0025997.1 mouse_genomes_project 2 104242449 104244342 + Trp53i11 protein_coding processed_transcript MGP_NODShiLtJ_T0055951.1 MGP_NODShiLtJ_G0025997.1 mouse_genomes_project 2 104243970 104257640 + Trp53i11 protein_coding processed_transcript MGP_NODShiLtJ_T0055952.1 MGP_NODShiLtJ_G0025997.1 mouse_genomes_project 2 104254801 104256481 + Trp53i11 protein_coding processed_transcript MGP_NODShiLtJ_T0052077.1 MGP_NODShiLtJ_G0025156.1 mouse_genomes_project 2 2066865 2076998 + MGP_NODShiLtJ_P0052077 Ucma protein_coding protein_coding MGP_NODShiLtJ_T0052078.1 MGP_NODShiLtJ_G0025156.1 mouse_genomes_project 2 2066868 2072570 + Ucma protein_coding processed_transcript MGP_NODShiLtJ_T0052079.1 MGP_NODShiLtJ_G0025156.1 mouse_genomes_project 2 2066894 2076990 + MGP_NODShiLtJ_P0052079 Ucma protein_coding protein_coding MGP_NODShiLtJ_T0052080.1 MGP_NODShiLtJ_G0025156.1 mouse_genomes_project 2 2066924 2076995 + MGP_NODShiLtJ_P0052080 Ucma protein_coding protein_coding MGP_NODShiLtJ_T0052081.1 MGP_NODShiLtJ_G0025156.1 mouse_genomes_project 2 2066927 2076895 + MGP_NODShiLtJ_P0052081 Ucma protein_coding protein_coding MGP_NODShiLtJ_T0056400.1 MGP_NODShiLtJ_G0026117.1 mouse_genomes_project 2 128972508 128978115 - MGP_NODShiLtJ_P0056400 Actc1 protein_coding protein_coding MGP_NODShiLtJ_T0056401.1 MGP_NODShiLtJ_G0026117.1 mouse_genomes_project 2 128977137 128978782 - MGP_NODShiLtJ_P0056401 Actc1 protein_coding protein_coding MGP_NODShiLtJ_T0052180.1 MGP_NODShiLtJ_G0025172.1 mouse_genomes_project 2 7701371 7704041 + MGP_NODShiLtJ_P0052180 4930412O13Rik protein_coding protein_coding MGP_NODShiLtJ_T0052181.1 MGP_NODShiLtJ_G0025172.1 mouse_genomes_project 2 7702755 7703455 + MGP_NODShiLtJ_P0052181 4930412O13Rik protein_coding protein_coding MGP_NODShiLtJ_T0101848.1 MGP_NODShiLtJ_G0040016.1 mouse_genomes_project 2 176500984 176538924 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004120.1 MGP_NODShiLtJ_G0003635.1 mouse_genomes_project 2 191417438 191420386 + Bcas1os1 antisense antisense MGP_NODShiLtJ_T0054816.1 MGP_NODShiLtJ_G0025632.1 mouse_genomes_project 2 75932012 76067920 - MGP_NODShiLtJ_P0054816 Abcb11 protein_coding protein_coding MGP_NODShiLtJ_T0054817.1 MGP_NODShiLtJ_G0025632.1 mouse_genomes_project 2 75932019 76067922 - MGP_NODShiLtJ_P0054817 Abcb11 protein_coding protein_coding MGP_NODShiLtJ_T0054818.1 MGP_NODShiLtJ_G0025632.1 mouse_genomes_project 2 75932019 76067906 - MGP_NODShiLtJ_P0054818 Abcb11 protein_coding protein_coding MGP_NODShiLtJ_T0054819.1 MGP_NODShiLtJ_G0025632.1 mouse_genomes_project 2 75932040 75932809 - Abcb11 protein_coding processed_transcript MGP_NODShiLtJ_T0057254.1 MGP_NODShiLtJ_G0026298.1 mouse_genomes_project 2 145516798 145526795 - MGP_NODShiLtJ_P0057254 protein_coding protein_coding MGP_NODShiLtJ_T0059324.1 MGP_NODShiLtJ_G0026788.1 mouse_genomes_project 2 195842055 195850864 - MGP_NODShiLtJ_P0059324 Slmo2 protein_coding protein_coding MGP_NODShiLtJ_T0059325.1 MGP_NODShiLtJ_G0026788.1 mouse_genomes_project 2 195842660 195850935 - MGP_NODShiLtJ_P0059325 Slmo2 protein_coding protein_coding MGP_NODShiLtJ_T0059326.1 MGP_NODShiLtJ_G0026788.1 mouse_genomes_project 2 195847174 195850892 - Slmo2 protein_coding retained_intron MGP_NODShiLtJ_T0059327.1 MGP_NODShiLtJ_G0026788.1 mouse_genomes_project 2 195847383 195850932 - MGP_NODShiLtJ_P0059327 Slmo2 protein_coding protein_coding MGP_NODShiLtJ_T0057833.1 MGP_NODShiLtJ_G0026433.1 mouse_genomes_project 2 167428079 167434942 + MGP_NODShiLtJ_P0057833 Cst8 protein_coding protein_coding MGP_NODShiLtJ_T0057834.1 MGP_NODShiLtJ_G0026433.1 mouse_genomes_project 2 167428128 167434942 + MGP_NODShiLtJ_P0057834 Cst8 protein_coding protein_coding MGP_NODShiLtJ_T0057835.1 MGP_NODShiLtJ_G0026433.1 mouse_genomes_project 2 167428197 167434942 + Cst8 protein_coding processed_transcript MGP_NODShiLtJ_T0055596.1 MGP_NODShiLtJ_G0025918.1 mouse_genomes_project 2 99704154 99705072 - MGP_NODShiLtJ_P0055596 Olfr1230 protein_coding protein_coding MGP_NODShiLtJ_T0053738.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32461467 32480970 + MGP_NODShiLtJ_P0053738 Pomt1 protein_coding protein_coding MGP_NODShiLtJ_T0053739.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32461520 32462578 + Pomt1 protein_coding retained_intron MGP_NODShiLtJ_T0053740.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32461549 32469954 + Pomt1 protein_coding retained_intron MGP_NODShiLtJ_T0053741.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32461562 32480966 + Pomt1 protein_coding retained_intron MGP_NODShiLtJ_T0053742.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32461914 32469579 + MGP_NODShiLtJ_P0053742 Pomt1 protein_coding protein_coding MGP_NODShiLtJ_T0053743.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32462216 32469669 + MGP_NODShiLtJ_P0053743 Pomt1 protein_coding protein_coding MGP_NODShiLtJ_T0053744.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32470315 32476866 + MGP_NODShiLtJ_P0053744 Pomt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053745.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32471246 32474648 + Pomt1 protein_coding retained_intron MGP_NODShiLtJ_T0053746.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32473529 32477728 + Pomt1 protein_coding retained_intron MGP_NODShiLtJ_T0053747.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32474619 32479750 + MGP_NODShiLtJ_P0053747 Pomt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053748.1 MGP_NODShiLtJ_G0025436.1 mouse_genomes_project 2 32477229 32478649 + Pomt1 protein_coding retained_intron MGP_NODShiLtJ_T0098304.1 MGP_NODShiLtJ_G0036710.1 mouse_genomes_project 2 19979295 19989728 - Gm13380 sense_intronic sense_intronic MGP_NODShiLtJ_T0052135.1 MGP_NODShiLtJ_G0025167.1 mouse_genomes_project 2 3313081 3346772 - MGP_NODShiLtJ_P0052135 Proser2 protein_coding protein_coding MGP_NODShiLtJ_T0052136.1 MGP_NODShiLtJ_G0025167.1 mouse_genomes_project 2 3315500 3346707 - MGP_NODShiLtJ_P0052136 Proser2 protein_coding protein_coding MGP_NODShiLtJ_T0052137.1 MGP_NODShiLtJ_G0025167.1 mouse_genomes_project 2 3316664 3346700 - MGP_NODShiLtJ_P0052137 Proser2 protein_coding protein_coding MGP_NODShiLtJ_T0052138.1 MGP_NODShiLtJ_G0025167.1 mouse_genomes_project 2 3341372 3346742 - Proser2 protein_coding processed_transcript MGP_NODShiLtJ_T0058508.1 MGP_NODShiLtJ_G0026593.1 mouse_genomes_project 2 176631593 176644991 - MGP_NODShiLtJ_P0058508 Dsn1 protein_coding protein_coding MGP_NODShiLtJ_T0058509.1 MGP_NODShiLtJ_G0026593.1 mouse_genomes_project 2 176631605 176645070 - MGP_NODShiLtJ_P0058509 Dsn1 protein_coding protein_coding MGP_NODShiLtJ_T0058510.1 MGP_NODShiLtJ_G0026593.1 mouse_genomes_project 2 176634052 176644946 - MGP_NODShiLtJ_P0058510 Dsn1 protein_coding protein_coding MGP_NODShiLtJ_T0058511.1 MGP_NODShiLtJ_G0026593.1 mouse_genomes_project 2 176638013 176641172 - Dsn1 protein_coding retained_intron MGP_NODShiLtJ_T0058512.1 MGP_NODShiLtJ_G0026593.1 mouse_genomes_project 2 176640655 176644217 - MGP_NODShiLtJ_P0058512 Dsn1 protein_coding protein_coding MGP_NODShiLtJ_T0058513.1 MGP_NODShiLtJ_G0026593.1 mouse_genomes_project 2 176643235 176644490 - MGP_NODShiLtJ_P0058513 Dsn1 protein_coding protein_coding MGP_NODShiLtJ_T0059220.1 MGP_NODShiLtJ_G0026758.1 mouse_genomes_project 2 193416870 193419497 + MGP_NODShiLtJ_P0059220 Mc3r protein_coding protein_coding MGP_NODShiLtJ_T0055539.1 MGP_NODShiLtJ_G0025864.1 mouse_genomes_project 2 97976317 97977256 - MGP_NODShiLtJ_P0055539 Olfr1157 protein_coding protein_coding MGP_NODShiLtJ_T0057637.1 MGP_NODShiLtJ_G0026383.1 mouse_genomes_project 2 157483897 157747330 - MGP_NODShiLtJ_P0057637 Tasp1 protein_coding protein_coding MGP_NODShiLtJ_T0057638.1 MGP_NODShiLtJ_G0026383.1 mouse_genomes_project 2 157483897 157747305 - MGP_NODShiLtJ_P0057638 Tasp1 protein_coding protein_coding MGP_NODShiLtJ_T0057639.1 MGP_NODShiLtJ_G0026383.1 mouse_genomes_project 2 157483897 157747350 - MGP_NODShiLtJ_P0057639 Tasp1 protein_coding protein_coding MGP_NODShiLtJ_T0057640.1 MGP_NODShiLtJ_G0026383.1 mouse_genomes_project 2 157646765 157721850 - Tasp1 protein_coding retained_intron MGP_NODShiLtJ_T0011409.1 MGP_NODShiLtJ_G0009542.1 mouse_genomes_project 2 175962486 175962702 + Gm22316 misc_RNA misc_RNA MGP_NODShiLtJ_T0017681.1 MGP_NODShiLtJ_G0015320.1 mouse_genomes_project 2 123798097 123799025 + Gm20638 processed_transcript processed_transcript MGP_NODShiLtJ_T0053357.1 MGP_NODShiLtJ_G0025382.1 mouse_genomes_project 2 29806566 29821968 + MGP_NODShiLtJ_P0053357 Slc27a4 protein_coding protein_coding MGP_NODShiLtJ_T0053358.1 MGP_NODShiLtJ_G0025382.1 mouse_genomes_project 2 29810930 29815349 + Slc27a4 protein_coding processed_transcript MGP_NODShiLtJ_T0100398.1 MGP_NODShiLtJ_G0038792.1 mouse_genomes_project 2 146823176 146823309 + Gm24451 snoRNA snoRNA MGP_NODShiLtJ_T0013671.1 MGP_NODShiLtJ_G0011779.1 mouse_genomes_project 2 160728853 160729783 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007290.1 MGP_NODShiLtJ_G0005970.1 mouse_genomes_project 2 166270316 166278239 + A530006G24Rik lincRNA lincRNA MGP_NODShiLtJ_T0100358.1 MGP_NODShiLtJ_G0038752.1 mouse_genomes_project 2 33515278 33515415 - Gm23546 snoRNA snoRNA MGP_NODShiLtJ_T0055106.1 MGP_NODShiLtJ_G0025694.1 mouse_genomes_project 2 83056977 83087103 - MGP_NODShiLtJ_P0055106 Nfe2l2 protein_coding protein_coding MGP_NODShiLtJ_T0055107.1 MGP_NODShiLtJ_G0025694.1 mouse_genomes_project 2 83072416 83086951 - Nfe2l2 protein_coding processed_transcript MGP_NODShiLtJ_T0052936.1 MGP_NODShiLtJ_G0025305.1 mouse_genomes_project 2 25388899 25389882 + MGP_NODShiLtJ_P0052936 Bmyc protein_coding protein_coding MGP_NODShiLtJ_T0059277.1 MGP_NODShiLtJ_G0026777.1 mouse_genomes_project 2 194970290 195021351 + MGP_NODShiLtJ_P0059277 Rab22a protein_coding protein_coding MGP_NODShiLtJ_T0059278.1 MGP_NODShiLtJ_G0026777.1 mouse_genomes_project 2 194970290 195021323 + MGP_NODShiLtJ_P0059278 Rab22a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059279.1 MGP_NODShiLtJ_G0026777.1 mouse_genomes_project 2 194970386 195015162 + MGP_NODShiLtJ_P0059279 Rab22a protein_coding protein_coding MGP_NODShiLtJ_T0056952.1 MGP_NODShiLtJ_G0026220.1 mouse_genomes_project 2 137829999 137857149 + MGP_NODShiLtJ_P0056952 Eif3j2 protein_coding protein_coding MGP_NODShiLtJ_T0055545.1 MGP_NODShiLtJ_G0025870.1 mouse_genomes_project 2 98116031 98116976 - MGP_NODShiLtJ_P0055545 protein_coding protein_coding MGP_NODShiLtJ_T0055546.1 MGP_NODShiLtJ_G0025870.1 mouse_genomes_project 2 98116031 98117466 - MGP_NODShiLtJ_P0055546 protein_coding protein_coding MGP_NODShiLtJ_T0056806.1 MGP_NODShiLtJ_G0026198.1 mouse_genomes_project 2 136847019 136854093 + Adal protein_coding retained_intron MGP_NODShiLtJ_T0056807.1 MGP_NODShiLtJ_G0026198.1 mouse_genomes_project 2 136847030 136865768 + MGP_NODShiLtJ_P0056807 Adal protein_coding protein_coding MGP_NODShiLtJ_T0056808.1 MGP_NODShiLtJ_G0026198.1 mouse_genomes_project 2 136847035 136854091 + Adal protein_coding retained_intron MGP_NODShiLtJ_T0056809.1 MGP_NODShiLtJ_G0026198.1 mouse_genomes_project 2 136847044 136859417 + Adal protein_coding processed_transcript MGP_NODShiLtJ_T0056810.1 MGP_NODShiLtJ_G0026198.1 mouse_genomes_project 2 136847090 136864679 + MGP_NODShiLtJ_P0056810 Adal protein_coding protein_coding MGP_NODShiLtJ_T0056811.1 MGP_NODShiLtJ_G0026198.1 mouse_genomes_project 2 136847112 136859605 + Adal protein_coding retained_intron MGP_NODShiLtJ_T0056812.1 MGP_NODShiLtJ_G0026198.1 mouse_genomes_project 2 136847387 136864637 + MGP_NODShiLtJ_P0056812 Adal protein_coding protein_coding MGP_NODShiLtJ_T0056813.1 MGP_NODShiLtJ_G0026198.1 mouse_genomes_project 2 136859180 136865429 + Adal protein_coding retained_intron MGP_NODShiLtJ_T0052462.1 MGP_NODShiLtJ_G0025218.1 mouse_genomes_project 2 18102332 18218120 + MGP_NODShiLtJ_P0052462 Armc3 protein_coding protein_coding MGP_NODShiLtJ_T0052463.1 MGP_NODShiLtJ_G0025218.1 mouse_genomes_project 2 18102332 18218120 + MGP_NODShiLtJ_P0052463 Armc3 protein_coding protein_coding MGP_NODShiLtJ_T0056399.1 MGP_NODShiLtJ_G0026116.1 mouse_genomes_project 2 128932906 128936927 - MGP_NODShiLtJ_P0056399 Gjd2 protein_coding protein_coding MGP_NODShiLtJ_T0057530.1 MGP_NODShiLtJ_G0026359.1 mouse_genomes_project 2 149067121 149120851 - MGP_NODShiLtJ_P0057530 Prokr2 protein_coding protein_coding MGP_NODShiLtJ_T0057531.1 MGP_NODShiLtJ_G0026359.1 mouse_genomes_project 2 149105124 149120849 - MGP_NODShiLtJ_P0057531 Prokr2 protein_coding protein_coding MGP_NODShiLtJ_T0057532.1 MGP_NODShiLtJ_G0026359.1 mouse_genomes_project 2 149105124 149120824 - MGP_NODShiLtJ_P0057532 Prokr2 protein_coding protein_coding MGP_NODShiLtJ_T0057533.1 MGP_NODShiLtJ_G0026359.1 mouse_genomes_project 2 149105968 149120871 - MGP_NODShiLtJ_P0057533 Prokr2 protein_coding protein_coding MGP_NODShiLtJ_T0057534.1 MGP_NODShiLtJ_G0026359.1 mouse_genomes_project 2 149116355 149120845 - MGP_NODShiLtJ_P0057534 Prokr2 protein_coding protein_coding MGP_NODShiLtJ_T0059632.1 MGP_NODShiLtJ_G0026848.1 mouse_genomes_project 2 203303629 203305434 - MGP_NODShiLtJ_P0059632 Sox18 protein_coding protein_coding MGP_NODShiLtJ_T0100362.1 MGP_NODShiLtJ_G0038756.1 mouse_genomes_project 2 44862879 44863011 + Gm24350 snoRNA snoRNA MGP_NODShiLtJ_T0053238.1 MGP_NODShiLtJ_G0025361.1 mouse_genomes_project 2 28385997 28392375 + Gbgt1 protein_coding processed_transcript MGP_NODShiLtJ_T0053239.1 MGP_NODShiLtJ_G0025361.1 mouse_genomes_project 2 28385997 28394528 + MGP_NODShiLtJ_P0053239 Gbgt1 protein_coding protein_coding MGP_NODShiLtJ_T0053240.1 MGP_NODShiLtJ_G0025361.1 mouse_genomes_project 2 28386852 28394528 + MGP_NODShiLtJ_P0053240 Gbgt1 protein_coding protein_coding MGP_NODShiLtJ_T0053499.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30389986 30407018 - MGP_NODShiLtJ_P0053499 Sh3glb2 protein_coding protein_coding MGP_NODShiLtJ_T0053500.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30389986 30407094 - MGP_NODShiLtJ_P0053500 Sh3glb2 protein_coding protein_coding MGP_NODShiLtJ_T0053501.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30389988 30407067 - MGP_NODShiLtJ_P0053501 Sh3glb2 protein_coding protein_coding MGP_NODShiLtJ_T0053502.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30389988 30407043 - MGP_NODShiLtJ_P0053502 Sh3glb2 protein_coding protein_coding MGP_NODShiLtJ_T0053503.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30389988 30407110 - MGP_NODShiLtJ_P0053503 Sh3glb2 protein_coding protein_coding MGP_NODShiLtJ_T0053504.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30390312 30407083 - Sh3glb2 protein_coding retained_intron MGP_NODShiLtJ_T0053505.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30390318 30391279 - Sh3glb2 protein_coding processed_transcript MGP_NODShiLtJ_T0053506.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30390997 30407115 - Sh3glb2 protein_coding processed_transcript MGP_NODShiLtJ_T0053507.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30391063 30392834 - Sh3glb2 protein_coding retained_intron MGP_NODShiLtJ_T0053508.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30391285 30392765 - Sh3glb2 protein_coding retained_intron MGP_NODShiLtJ_T0053509.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30393245 30403143 - Sh3glb2 protein_coding retained_intron MGP_NODShiLtJ_T0053510.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30393267 30402658 - Sh3glb2 protein_coding retained_intron MGP_NODShiLtJ_T0053511.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30394660 30407023 - Sh3glb2 protein_coding processed_transcript MGP_NODShiLtJ_T0053512.1 MGP_NODShiLtJ_G0025403.1 mouse_genomes_project 2 30394917 30407038 - Sh3glb2 protein_coding retained_intron MGP_NODShiLtJ_T0056336.1 MGP_NODShiLtJ_G0026087.1 mouse_genomes_project 2 126478811 126479759 + MGP_NODShiLtJ_P0056336 Olfr1302 protein_coding protein_coding MGP_NODShiLtJ_T0013471.1 MGP_NODShiLtJ_G0011579.1 mouse_genomes_project 2 76619711 76620173 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013659.1 MGP_NODShiLtJ_G0011767.1 mouse_genomes_project 2 151761122 151761435 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057496.1 MGP_NODShiLtJ_G0026351.1 mouse_genomes_project 2 148632523 148648025 + MGP_NODShiLtJ_P0057496 Prnp protein_coding protein_coding MGP_NODShiLtJ_T0057048.1 MGP_NODShiLtJ_G0026246.1 mouse_genomes_project 2 141735776 141738554 + MGP_NODShiLtJ_P0057048 Gm9913 protein_coding protein_coding MGP_NODShiLtJ_T0013661.1 MGP_NODShiLtJ_G0011769.1 mouse_genomes_project 2 153596456 153597160 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004061.1 MGP_NODShiLtJ_G0003586.1 mouse_genomes_project 2 162546033 162547642 + 4930444E06Rik antisense antisense MGP_NODShiLtJ_T0058275.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175165193 175225572 - MGP_NODShiLtJ_P0058275 Trpc4ap protein_coding protein_coding MGP_NODShiLtJ_T0058276.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175165230 175225520 - MGP_NODShiLtJ_P0058276 Trpc4ap protein_coding protein_coding MGP_NODShiLtJ_T0058277.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175165667 175168665 - Trpc4ap protein_coding processed_transcript MGP_NODShiLtJ_T0058278.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175166518 175168711 - Trpc4ap protein_coding retained_intron MGP_NODShiLtJ_T0058279.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175169904 175206219 - Trpc4ap protein_coding retained_intron MGP_NODShiLtJ_T0058280.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175169911 175171465 - Trpc4ap protein_coding retained_intron MGP_NODShiLtJ_T0058281.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175174541 175196078 - Trpc4ap protein_coding retained_intron MGP_NODShiLtJ_T0058282.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175184947 175225570 - Trpc4ap protein_coding retained_intron MGP_NODShiLtJ_T0058283.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175198145 175200779 - Trpc4ap protein_coding retained_intron MGP_NODShiLtJ_T0058284.1 MGP_NODShiLtJ_G0026559.1 mouse_genomes_project 2 175206224 175225311 - Trpc4ap protein_coding processed_transcript MGP_NODShiLtJ_T0007377.1 MGP_NODShiLtJ_G0006043.1 mouse_genomes_project 2 202368432 202377049 - Gm14340 lincRNA lincRNA MGP_NODShiLtJ_T0058889.1 MGP_NODShiLtJ_G0026694.1 mouse_genomes_project 2 185181495 185185681 + MGP_NODShiLtJ_P0058889 Zswim1 protein_coding protein_coding MGP_NODShiLtJ_T0058890.1 MGP_NODShiLtJ_G0026694.1 mouse_genomes_project 2 185181822 185184078 + MGP_NODShiLtJ_P0058890 Zswim1 protein_coding protein_coding MGP_NODShiLtJ_T0055586.1 MGP_NODShiLtJ_G0025909.1 mouse_genomes_project 2 99497602 99498538 - MGP_NODShiLtJ_P0055586 Olfr1220 protein_coding protein_coding MGP_NODShiLtJ_T0011395.1 MGP_NODShiLtJ_G0009528.1 mouse_genomes_project 2 86168343 86168573 - Gm23149 misc_RNA misc_RNA MGP_NODShiLtJ_T0059119.1 MGP_NODShiLtJ_G0026733.1 mouse_genomes_project 2 188255862 188260568 + MGP_NODShiLtJ_P0059119 Snai1 protein_coding protein_coding MGP_NODShiLtJ_T0013591.1 MGP_NODShiLtJ_G0011699.1 mouse_genomes_project 2 120431108 120431714 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013529.1 MGP_NODShiLtJ_G0011637.1 mouse_genomes_project 2 96976851 96977386 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013523.1 MGP_NODShiLtJ_G0011631.1 mouse_genomes_project 2 94816930 94817126 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056940.1 MGP_NODShiLtJ_G0026217.1 mouse_genomes_project 2 137733163 137736716 - MGP_NODShiLtJ_P0056940 protein_coding protein_coding MGP_NODShiLtJ_T0001029.1 MGP_NODShiLtJ_G0000955.1 mouse_genomes_project 2 13243239 13244565 + TEC TEC MGP_NODShiLtJ_T0003880.1 MGP_NODShiLtJ_G0003460.1 mouse_genomes_project 2 27103715 27108310 + AA645442 antisense antisense MGP_NODShiLtJ_T0054488.1 MGP_NODShiLtJ_G0025574.1 mouse_genomes_project 2 57102251 57167284 - MGP_NODShiLtJ_P0054488 Prpf40a protein_coding protein_coding MGP_NODShiLtJ_T0054489.1 MGP_NODShiLtJ_G0025574.1 mouse_genomes_project 2 57106717 57114113 - Prpf40a protein_coding processed_transcript MGP_NODShiLtJ_T0054490.1 MGP_NODShiLtJ_G0025574.1 mouse_genomes_project 2 57122336 57167343 - MGP_NODShiLtJ_P0054490 Prpf40a protein_coding protein_coding MGP_NODShiLtJ_T0054491.1 MGP_NODShiLtJ_G0025574.1 mouse_genomes_project 2 57142212 57167263 - Prpf40a protein_coding processed_transcript MGP_NODShiLtJ_T0054492.1 MGP_NODShiLtJ_G0025574.1 mouse_genomes_project 2 57147759 57167284 - Prpf40a protein_coding processed_transcript MGP_NODShiLtJ_T0007356.1 MGP_NODShiLtJ_G0006024.1 mouse_genomes_project 2 190153074 190155828 + 9430093N23Rik lincRNA lincRNA MGP_NODShiLtJ_T0059575.1 MGP_NODShiLtJ_G0026840.1 mouse_genomes_project 2 202974804 203053891 - MGP_NODShiLtJ_P0059575 Zbtb46 protein_coding protein_coding MGP_NODShiLtJ_T0059576.1 MGP_NODShiLtJ_G0026840.1 mouse_genomes_project 2 202977928 203012386 - MGP_NODShiLtJ_P0059576 Zbtb46 protein_coding protein_coding MGP_NODShiLtJ_T0059577.1 MGP_NODShiLtJ_G0026840.1 mouse_genomes_project 2 202998546 203053891 - MGP_NODShiLtJ_P0059577 Zbtb46 protein_coding protein_coding MGP_NODShiLtJ_T0059578.1 MGP_NODShiLtJ_G0026840.1 mouse_genomes_project 2 203009551 203053891 - Zbtb46 protein_coding retained_intron MGP_NODShiLtJ_T0059579.1 MGP_NODShiLtJ_G0026840.1 mouse_genomes_project 2 203012225 203053874 - MGP_NODShiLtJ_P0059579 Zbtb46 protein_coding protein_coding MGP_NODShiLtJ_T0055474.1 MGP_NODShiLtJ_G0025809.1 mouse_genomes_project 2 95959854 95962380 - MGP_NODShiLtJ_P0055474 Olfr1085 protein_coding protein_coding MGP_NODShiLtJ_T0052492.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19901183 20028424 - MGP_NODShiLtJ_P0052492 Arhgap21 protein_coding protein_coding MGP_NODShiLtJ_T0052493.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19901183 20027264 - MGP_NODShiLtJ_P0052493 Arhgap21 protein_coding protein_coding MGP_NODShiLtJ_T0052494.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19901204 20027263 - MGP_NODShiLtJ_P0052494 Arhgap21 protein_coding protein_coding MGP_NODShiLtJ_T0052495.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19901858 20028069 - MGP_NODShiLtJ_P0052495 Arhgap21 protein_coding protein_coding MGP_NODShiLtJ_T0052496.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19903216 19906512 - Arhgap21 protein_coding retained_intron MGP_NODShiLtJ_T0052497.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19903307 19938336 - MGP_NODShiLtJ_P0052497 Arhgap21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052498.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19903508 19913153 - Arhgap21 protein_coding retained_intron MGP_NODShiLtJ_T0052499.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19903644 19907896 - Arhgap21 protein_coding retained_intron MGP_NODShiLtJ_T0052500.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19906305 19908970 - Arhgap21 protein_coding processed_transcript MGP_NODShiLtJ_T0052501.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19906306 19913146 - Arhgap21 protein_coding processed_transcript MGP_NODShiLtJ_T0052502.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19912179 19924464 - MGP_NODShiLtJ_P0052502 Arhgap21 protein_coding protein_coding MGP_NODShiLtJ_T0052503.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19912693 19914367 - Arhgap21 protein_coding retained_intron MGP_NODShiLtJ_T0052504.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19941464 19972123 - Arhgap21 protein_coding processed_transcript MGP_NODShiLtJ_T0052505.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19945006 20002938 - MGP_NODShiLtJ_P0052505 Arhgap21 protein_coding protein_coding MGP_NODShiLtJ_T0052506.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 19972228 20028168 - MGP_NODShiLtJ_P0052506 Arhgap21 protein_coding protein_coding MGP_NODShiLtJ_T0052507.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 20027140 20028027 - Arhgap21 protein_coding processed_transcript MGP_NODShiLtJ_T0052508.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 20027165 20028375 - Arhgap21 protein_coding processed_transcript MGP_NODShiLtJ_T0052509.1 MGP_NODShiLtJ_G0025224.1 mouse_genomes_project 2 20027232 20028423 - Arhgap21 protein_coding processed_transcript MGP_NODShiLtJ_T0058550.1 MGP_NODShiLtJ_G0026600.1 mouse_genomes_project 2 177018137 177038177 - Ghrh protein_coding processed_transcript MGP_NODShiLtJ_T0058551.1 MGP_NODShiLtJ_G0026600.1 mouse_genomes_project 2 177018137 177036379 - MGP_NODShiLtJ_P0058551 Ghrh protein_coding protein_coding MGP_NODShiLtJ_T0058552.1 MGP_NODShiLtJ_G0026600.1 mouse_genomes_project 2 177018137 177027112 - MGP_NODShiLtJ_P0058552 Ghrh protein_coding protein_coding MGP_NODShiLtJ_T0057242.1 MGP_NODShiLtJ_G0026293.1 mouse_genomes_project 2 145281008 145318894 + MGP_NODShiLtJ_P0057242 Tmem87b protein_coding protein_coding MGP_NODShiLtJ_T0057243.1 MGP_NODShiLtJ_G0026293.1 mouse_genomes_project 2 145281229 145315978 + MGP_NODShiLtJ_P0057243 Tmem87b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0057244.1 MGP_NODShiLtJ_G0026293.1 mouse_genomes_project 2 145281274 145316427 + MGP_NODShiLtJ_P0057244 Tmem87b protein_coding protein_coding MGP_NODShiLtJ_T0057245.1 MGP_NODShiLtJ_G0026293.1 mouse_genomes_project 2 145295383 145314951 + Tmem87b protein_coding processed_transcript MGP_NODShiLtJ_T0057246.1 MGP_NODShiLtJ_G0026293.1 mouse_genomes_project 2 145304913 145314360 + Tmem87b protein_coding retained_intron MGP_NODShiLtJ_T0057247.1 MGP_NODShiLtJ_G0026293.1 mouse_genomes_project 2 145314594 145316046 + Tmem87b protein_coding processed_transcript MGP_NODShiLtJ_T0007316.1 MGP_NODShiLtJ_G0005989.1 mouse_genomes_project 2 177317843 177319580 - Platr27 lincRNA lincRNA MGP_NODShiLtJ_T0007171.1 MGP_NODShiLtJ_G0005873.1 mouse_genomes_project 2 80628700 80646599 + Gm13708 lincRNA lincRNA MGP_NODShiLtJ_T0052117.1 MGP_NODShiLtJ_G0025163.1 mouse_genomes_project 2 3053053 3053908 - Gm13199 protein_coding processed_transcript MGP_NODShiLtJ_T0052118.1 MGP_NODShiLtJ_G0025163.1 mouse_genomes_project 2 3053054 3053897 - MGP_NODShiLtJ_P0052118 Gm13199 protein_coding protein_coding MGP_NODShiLtJ_T0053761.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32519562 32529938 + MGP_NODShiLtJ_P0053761 Golga2 protein_coding protein_coding MGP_NODShiLtJ_T0053762.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32520431 32544794 + MGP_NODShiLtJ_P0053762 Golga2 protein_coding protein_coding MGP_NODShiLtJ_T0053763.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32520491 32544785 + MGP_NODShiLtJ_P0053763 Golga2 protein_coding protein_coding MGP_NODShiLtJ_T0053764.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32520504 32529401 + Golga2 protein_coding retained_intron MGP_NODShiLtJ_T0053765.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32520511 32539833 + MGP_NODShiLtJ_P0053765 Golga2 protein_coding protein_coding MGP_NODShiLtJ_T0053766.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32520524 32544786 + MGP_NODShiLtJ_P0053766 Golga2 protein_coding protein_coding MGP_NODShiLtJ_T0053767.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32520529 32531472 + MGP_NODShiLtJ_P0053767 Golga2 protein_coding protein_coding MGP_NODShiLtJ_T0053768.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32520533 32539074 + MGP_NODShiLtJ_P0053768 Golga2 protein_coding protein_coding MGP_NODShiLtJ_T0053769.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32529230 32544783 + Golga2 protein_coding retained_intron MGP_NODShiLtJ_T0053770.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32530950 32531433 + Golga2 protein_coding retained_intron MGP_NODShiLtJ_T0053771.1 MGP_NODShiLtJ_G0025439.1 mouse_genomes_project 2 32538084 32539823 + Golga2 protein_coding retained_intron MGP_NODShiLtJ_T0017581.1 MGP_NODShiLtJ_G0015261.1 mouse_genomes_project 2 1319356 1334498 - Gm13187 processed_transcript processed_transcript MGP_NODShiLtJ_T0017582.1 MGP_NODShiLtJ_G0015261.1 mouse_genomes_project 2 1322920 1334553 - Gm13187 processed_transcript processed_transcript MGP_NODShiLtJ_T0017583.1 MGP_NODShiLtJ_G0015261.1 mouse_genomes_project 2 1333896 1334553 - Gm13187 processed_transcript processed_transcript MGP_NODShiLtJ_T0057829.1 MGP_NODShiLtJ_G0026430.1 mouse_genomes_project 2 167396835 167399751 - MGP_NODShiLtJ_P0057829 Cst11 protein_coding protein_coding MGP_NODShiLtJ_T0056346.1 MGP_NODShiLtJ_G0026097.1 mouse_genomes_project 2 126826431 126827370 - MGP_NODShiLtJ_P0056346 Olfr1314 protein_coding protein_coding MGP_NODShiLtJ_T0058486.1 MGP_NODShiLtJ_G0026588.1 mouse_genomes_project 2 176445815 176464333 + MGP_NODShiLtJ_P0058486 Tgif2 protein_coding protein_coding MGP_NODShiLtJ_T0058487.1 MGP_NODShiLtJ_G0026588.1 mouse_genomes_project 2 176446705 176454699 + MGP_NODShiLtJ_P0058487 Tgif2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058488.1 MGP_NODShiLtJ_G0026588.1 mouse_genomes_project 2 176456980 176462759 + Tgif2 protein_coding processed_transcript MGP_NODShiLtJ_T0058489.1 MGP_NODShiLtJ_G0026588.1 mouse_genomes_project 2 176457860 176463113 + Tgif2 protein_coding processed_transcript MGP_NODShiLtJ_T0055559.1 MGP_NODShiLtJ_G0025883.1 mouse_genomes_project 2 98709278 98710190 + MGP_NODShiLtJ_P0055559 Olfr1186 protein_coding protein_coding MGP_NODShiLtJ_T0059464.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202528203 202543410 + MGP_NODShiLtJ_P0059464 Arfgap1 protein_coding protein_coding MGP_NODShiLtJ_T0059465.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202528212 202543478 + MGP_NODShiLtJ_P0059465 Arfgap1 protein_coding protein_coding MGP_NODShiLtJ_T0059466.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202528223 202542652 + MGP_NODShiLtJ_P0059466 Arfgap1 protein_coding protein_coding MGP_NODShiLtJ_T0059467.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202528243 202543412 + Arfgap1 protein_coding retained_intron MGP_NODShiLtJ_T0059468.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202528245 202543398 + Arfgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0059469.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202528255 202543412 + MGP_NODShiLtJ_P0059469 Arfgap1 protein_coding protein_coding MGP_NODShiLtJ_T0059470.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202528257 202533901 + Arfgap1 protein_coding retained_intron MGP_NODShiLtJ_T0059471.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202528278 202543263 + MGP_NODShiLtJ_P0059471 Arfgap1 protein_coding protein_coding MGP_NODShiLtJ_T0059472.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202532011 202542425 + MGP_NODShiLtJ_P0059472 Arfgap1 protein_coding protein_coding MGP_NODShiLtJ_T0059473.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202532026 202542322 + MGP_NODShiLtJ_P0059473 Arfgap1 protein_coding protein_coding MGP_NODShiLtJ_T0059474.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202534457 202537706 + Arfgap1 protein_coding retained_intron MGP_NODShiLtJ_T0059475.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202534474 202538994 + Arfgap1 protein_coding retained_intron MGP_NODShiLtJ_T0059476.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202534802 202538478 + Arfgap1 protein_coding retained_intron MGP_NODShiLtJ_T0059477.1 MGP_NODShiLtJ_G0026823.1 mouse_genomes_project 2 202541300 202542349 + Arfgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0054724.1 MGP_NODShiLtJ_G0025614.1 mouse_genomes_project 2 71513710 71579587 - MGP_NODShiLtJ_P0054724 Slc38a11 protein_coding protein_coding MGP_NODShiLtJ_T0054725.1 MGP_NODShiLtJ_G0025614.1 mouse_genomes_project 2 71513792 71579024 - MGP_NODShiLtJ_P0054725 Slc38a11 protein_coding protein_coding MGP_NODShiLtJ_T0054726.1 MGP_NODShiLtJ_G0025614.1 mouse_genomes_project 2 71513847 71579480 - MGP_NODShiLtJ_P0054726 Slc38a11 protein_coding protein_coding MGP_NODShiLtJ_T0054727.1 MGP_NODShiLtJ_G0025614.1 mouse_genomes_project 2 71521014 71579595 - MGP_NODShiLtJ_P0054727 Slc38a11 protein_coding protein_coding MGP_NODShiLtJ_T0054728.1 MGP_NODShiLtJ_G0025614.1 mouse_genomes_project 2 71565808 71579595 - Slc38a11 protein_coding processed_transcript MGP_NODShiLtJ_T0054729.1 MGP_NODShiLtJ_G0025614.1 mouse_genomes_project 2 71566372 71579561 - MGP_NODShiLtJ_P0054729 Slc38a11 protein_coding protein_coding MGP_NODShiLtJ_T0054730.1 MGP_NODShiLtJ_G0025614.1 mouse_genomes_project 2 71570365 71579591 - Slc38a11 protein_coding processed_transcript MGP_NODShiLtJ_T0013708.1 MGP_NODShiLtJ_G0011816.1 mouse_genomes_project 2 174326368 174347116 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052764.1 MGP_NODShiLtJ_G0025273.1 mouse_genomes_project 2 24912956 24926413 + MGP_NODShiLtJ_P0052764 Anapc2 protein_coding protein_coding MGP_NODShiLtJ_T0052765.1 MGP_NODShiLtJ_G0025273.1 mouse_genomes_project 2 24913061 24916838 + Anapc2 protein_coding processed_transcript MGP_NODShiLtJ_T0052766.1 MGP_NODShiLtJ_G0025273.1 mouse_genomes_project 2 24913944 24918872 + MGP_NODShiLtJ_P0052766 Anapc2 protein_coding protein_coding MGP_NODShiLtJ_T0052767.1 MGP_NODShiLtJ_G0025273.1 mouse_genomes_project 2 24919459 24920920 + Anapc2 protein_coding processed_transcript MGP_NODShiLtJ_T0017627.1 MGP_NODShiLtJ_G0015287.1 mouse_genomes_project 2 53957318 54067277 + Gm13483 processed_transcript processed_transcript MGP_NODShiLtJ_T0017628.1 MGP_NODShiLtJ_G0015287.1 mouse_genomes_project 2 53957372 54146808 + Gm13483 processed_transcript processed_transcript MGP_NODShiLtJ_T0013477.1 MGP_NODShiLtJ_G0011585.1 mouse_genomes_project 2 79418283 79418579 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058657.1 MGP_NODShiLtJ_G0026625.1 mouse_genomes_project 2 180592124 180683972 + MGP_NODShiLtJ_P0058657 Top1 protein_coding protein_coding MGP_NODShiLtJ_T0058658.1 MGP_NODShiLtJ_G0026625.1 mouse_genomes_project 2 180592216 180596344 + Top1 protein_coding processed_transcript MGP_NODShiLtJ_T0058659.1 MGP_NODShiLtJ_G0026625.1 mouse_genomes_project 2 180618235 180633026 + Top1 protein_coding retained_intron MGP_NODShiLtJ_T0058660.1 MGP_NODShiLtJ_G0026625.1 mouse_genomes_project 2 180663393 180664930 + Top1 protein_coding processed_transcript MGP_NODShiLtJ_T0058661.1 MGP_NODShiLtJ_G0026625.1 mouse_genomes_project 2 180678694 180682592 + Top1 protein_coding retained_intron MGP_NODShiLtJ_T0052704.1 MGP_NODShiLtJ_G0025258.1 mouse_genomes_project 2 24718859 24728342 - MGP_NODShiLtJ_P0052704 Noxa1 protein_coding protein_coding MGP_NODShiLtJ_T0052705.1 MGP_NODShiLtJ_G0025258.1 mouse_genomes_project 2 24718859 24728324 - MGP_NODShiLtJ_P0052705 Noxa1 protein_coding protein_coding MGP_NODShiLtJ_T0013608.1 MGP_NODShiLtJ_G0011716.1 mouse_genomes_project 2 126571945 126582139 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101803.1 MGP_NODShiLtJ_G0039971.1 mouse_genomes_project 2 94589736 94590462 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007224.1 MGP_NODShiLtJ_G0005915.1 mouse_genomes_project 2 117116608 117123788 + Gm13881 lincRNA lincRNA MGP_NODShiLtJ_T0056344.1 MGP_NODShiLtJ_G0026095.1 mouse_genomes_project 2 126782729 126783683 - MGP_NODShiLtJ_P0056344 Olfr1312 protein_coding protein_coding MGP_NODShiLtJ_T0013596.1 MGP_NODShiLtJ_G0011704.1 mouse_genomes_project 2 122419136 122419396 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100428.1 MGP_NODShiLtJ_G0038822.1 mouse_genomes_project 2 189154381 189154518 + Gm22704 snoRNA snoRNA MGP_NODShiLtJ_T0057515.1 MGP_NODShiLtJ_G0026356.1 mouse_genomes_project 2 148965488 148974610 - MGP_NODShiLtJ_P0057515 Tmem230 protein_coding protein_coding MGP_NODShiLtJ_T0057516.1 MGP_NODShiLtJ_G0026356.1 mouse_genomes_project 2 148965488 148974572 - MGP_NODShiLtJ_P0057516 Tmem230 protein_coding protein_coding MGP_NODShiLtJ_T0057517.1 MGP_NODShiLtJ_G0026356.1 mouse_genomes_project 2 148965488 148974453 - MGP_NODShiLtJ_P0057517 Tmem230 protein_coding protein_coding MGP_NODShiLtJ_T0057518.1 MGP_NODShiLtJ_G0026356.1 mouse_genomes_project 2 148965490 148974591 - MGP_NODShiLtJ_P0057518 Tmem230 protein_coding protein_coding MGP_NODShiLtJ_T0057519.1 MGP_NODShiLtJ_G0026356.1 mouse_genomes_project 2 148972118 148974562 - Tmem230 protein_coding processed_transcript MGP_NODShiLtJ_T0057520.1 MGP_NODShiLtJ_G0026356.1 mouse_genomes_project 2 148972650 148974559 - Tmem230 protein_coding retained_intron MGP_NODShiLtJ_T0052415.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16779303 16974993 + MGP_NODShiLtJ_P0052415 Mllt10 protein_coding protein_coding MGP_NODShiLtJ_T0052416.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16787155 16859934 + Mllt10 protein_coding processed_transcript MGP_NODShiLtJ_T0052417.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16787445 16864466 + Mllt10 protein_coding processed_transcript MGP_NODShiLtJ_T0052418.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16787448 16970534 + MGP_NODShiLtJ_P0052418 Mllt10 protein_coding protein_coding MGP_NODShiLtJ_T0052419.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16787566 16861398 + Mllt10 protein_coding processed_transcript MGP_NODShiLtJ_T0052420.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16787595 16842202 + Mllt10 protein_coding processed_transcript MGP_NODShiLtJ_T0052421.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16787602 16788017 + Mllt10 protein_coding processed_transcript MGP_NODShiLtJ_T0052422.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16820974 16970376 + MGP_NODShiLtJ_P0052422 Mllt10 protein_coding protein_coding MGP_NODShiLtJ_T0052423.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16861294 16914168 + Mllt10 protein_coding processed_transcript MGP_NODShiLtJ_T0052424.1 MGP_NODShiLtJ_G0025211.1 mouse_genomes_project 2 16926064 16943090 + Mllt10 protein_coding processed_transcript MGP_NODShiLtJ_T0013431.1 MGP_NODShiLtJ_G0011539.1 mouse_genomes_project 2 60648121 60650381 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058609.1 MGP_NODShiLtJ_G0026613.1 mouse_genomes_project 2 178147228 178159166 + MGP_NODShiLtJ_P0058609 Snhg11 protein_coding protein_coding MGP_NODShiLtJ_T0058610.1 MGP_NODShiLtJ_G0026613.1 mouse_genomes_project 2 178147251 178148797 + Snhg11 protein_coding retained_intron MGP_NODShiLtJ_T0058611.1 MGP_NODShiLtJ_G0026613.1 mouse_genomes_project 2 178147288 178154609 + MGP_NODShiLtJ_P0058611 Snhg11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058612.1 MGP_NODShiLtJ_G0026613.1 mouse_genomes_project 2 178147305 178150653 + Snhg11 protein_coding retained_intron MGP_NODShiLtJ_T0058613.1 MGP_NODShiLtJ_G0026613.1 mouse_genomes_project 2 178147315 178152653 + MGP_NODShiLtJ_P0058613 Snhg11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057077.1 MGP_NODShiLtJ_G0026254.1 mouse_genomes_project 2 142296126 142297573 + Fgf7 protein_coding processed_transcript MGP_NODShiLtJ_T0057078.1 MGP_NODShiLtJ_G0026254.1 mouse_genomes_project 2 142296126 142363374 + MGP_NODShiLtJ_P0057078 Fgf7 protein_coding protein_coding MGP_NODShiLtJ_T0057079.1 MGP_NODShiLtJ_G0026254.1 mouse_genomes_project 2 142296441 142362710 + MGP_NODShiLtJ_P0057079 Fgf7 protein_coding protein_coding MGP_NODShiLtJ_T0013410.1 MGP_NODShiLtJ_G0011518.1 mouse_genomes_project 2 53291440 53291918 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055087.1 MGP_NODShiLtJ_G0025687.1 mouse_genomes_project 2 81987700 81990722 + MGP_NODShiLtJ_P0055087 Hoxd8 protein_coding protein_coding MGP_NODShiLtJ_T0055088.1 MGP_NODShiLtJ_G0025687.1 mouse_genomes_project 2 81987990 81991843 + MGP_NODShiLtJ_P0055088 Hoxd8 protein_coding protein_coding MGP_NODShiLtJ_T0055089.1 MGP_NODShiLtJ_G0025687.1 mouse_genomes_project 2 81988236 81991217 + MGP_NODShiLtJ_P0055089 Hoxd8 protein_coding protein_coding MGP_NODShiLtJ_T0013534.1 MGP_NODShiLtJ_G0011642.1 mouse_genomes_project 2 97179230 97180388 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052653.1 MGP_NODShiLtJ_G0025252.1 mouse_genomes_project 2 24563087 24576834 + MGP_NODShiLtJ_P0052653 Zmynd19 protein_coding protein_coding MGP_NODShiLtJ_T0013757.1 MGP_NODShiLtJ_G0011865.1 mouse_genomes_project 2 195392215 195392870 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004009.1 MGP_NODShiLtJ_G0003549.1 mouse_genomes_project 2 130745476 130772020 - Gm13977 antisense antisense MGP_NODShiLtJ_T0055534.1 MGP_NODShiLtJ_G0025859.1 mouse_genomes_project 2 97826514 97827460 + MGP_NODShiLtJ_P0055534 protein_coding protein_coding MGP_NODShiLtJ_T0056674.1 MGP_NODShiLtJ_G0026178.1 mouse_genomes_project 2 135886465 135910558 - MGP_NODShiLtJ_P0056674 Pla2g4d protein_coding protein_coding MGP_NODShiLtJ_T0052572.1 MGP_NODShiLtJ_G0025237.1 mouse_genomes_project 2 22601714 22720166 + MGP_NODShiLtJ_P0052572 Nxph2 protein_coding protein_coding MGP_NODShiLtJ_T0013490.1 MGP_NODShiLtJ_G0011598.1 mouse_genomes_project 2 83220990 83221756 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013391.1 MGP_NODShiLtJ_G0011499.1 mouse_genomes_project 2 40526489 40527586 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055122.1 MGP_NODShiLtJ_G0025700.1 mouse_genomes_project 2 83784921 83791081 - MGP_NODShiLtJ_P0055122 Cyct protein_coding protein_coding MGP_NODShiLtJ_T0054135.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36040897 36223088 + MGP_NODShiLtJ_P0054135 Dab2ip protein_coding protein_coding MGP_NODShiLtJ_T0054136.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36065442 36223086 + MGP_NODShiLtJ_P0054136 Dab2ip protein_coding protein_coding MGP_NODShiLtJ_T0054137.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36105875 36223086 + MGP_NODShiLtJ_P0054137 Dab2ip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054138.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36106015 36218695 + MGP_NODShiLtJ_P0054138 Dab2ip protein_coding protein_coding MGP_NODShiLtJ_T0054139.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36106054 36223086 + MGP_NODShiLtJ_P0054139 Dab2ip protein_coding protein_coding MGP_NODShiLtJ_T0054140.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36150714 36199267 + Dab2ip protein_coding retained_intron MGP_NODShiLtJ_T0054141.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36151961 36223088 + MGP_NODShiLtJ_P0054141 Dab2ip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054142.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36152039 36200353 + Dab2ip protein_coding processed_transcript MGP_NODShiLtJ_T0054143.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36182433 36223086 + MGP_NODShiLtJ_P0054143 Dab2ip protein_coding protein_coding MGP_NODShiLtJ_T0054144.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36182772 36219417 + MGP_NODShiLtJ_P0054144 Dab2ip protein_coding protein_coding MGP_NODShiLtJ_T0054145.1 MGP_NODShiLtJ_G0025494.1 mouse_genomes_project 2 36200746 36223088 + MGP_NODShiLtJ_P0054145 Dab2ip protein_coding protein_coding MGP_NODShiLtJ_T0013500.1 MGP_NODShiLtJ_G0011608.1 mouse_genomes_project 2 86686187 86686638 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017654.1 MGP_NODShiLtJ_G0015309.1 mouse_genomes_project 2 101743380 101754669 - Ptpmt1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017655.1 MGP_NODShiLtJ_G0015309.1 mouse_genomes_project 2 101745377 101754862 - Ptpmt1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017656.1 MGP_NODShiLtJ_G0015309.1 mouse_genomes_project 2 101745377 101755070 - Ptpmt1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017657.1 MGP_NODShiLtJ_G0015309.1 mouse_genomes_project 2 101745658 101754407 - Ptpmt1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017658.1 MGP_NODShiLtJ_G0015309.1 mouse_genomes_project 2 101748702 101754480 - Ptpmt1 processed_transcript processed_transcript MGP_NODShiLtJ_T0056318.1 MGP_NODShiLtJ_G0026071.1 mouse_genomes_project 2 124970127 125009102 + MGP_NODShiLtJ_P0056318 Muc15 protein_coding protein_coding MGP_NODShiLtJ_T0056319.1 MGP_NODShiLtJ_G0026071.1 mouse_genomes_project 2 124970398 125009102 + MGP_NODShiLtJ_P0056319 Muc15 protein_coding protein_coding MGP_NODShiLtJ_T0056320.1 MGP_NODShiLtJ_G0026071.1 mouse_genomes_project 2 124970435 125007172 + MGP_NODShiLtJ_P0056320 Muc15 protein_coding protein_coding MGP_NODShiLtJ_T0053121.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26677734 26679113 - Surf1 protein_coding retained_intron MGP_NODShiLtJ_T0053122.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26677736 26680654 - MGP_NODShiLtJ_P0053122 Surf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053123.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26677736 26680822 - MGP_NODShiLtJ_P0053123 Surf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053124.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26677736 26680884 - MGP_NODShiLtJ_P0053124 Surf1 protein_coding protein_coding MGP_NODShiLtJ_T0053125.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26677930 26680674 - MGP_NODShiLtJ_P0053125 Surf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053126.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26677930 26680699 - MGP_NODShiLtJ_P0053126 Surf1 protein_coding protein_coding MGP_NODShiLtJ_T0053127.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26678584 26680665 - Surf1 protein_coding retained_intron MGP_NODShiLtJ_T0053128.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26678828 26679846 - Surf1 protein_coding retained_intron MGP_NODShiLtJ_T0053129.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26679211 26680686 - MGP_NODShiLtJ_P0053129 Surf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053130.1 MGP_NODShiLtJ_G0025338.1 mouse_genomes_project 2 26679810 26680699 - MGP_NODShiLtJ_P0053130 Surf1 protein_coding protein_coding MGP_NODShiLtJ_T0101442.1 MGP_NODShiLtJ_G0039626.1 mouse_genomes_project 2 162783344 162791821 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101443.1 MGP_NODShiLtJ_G0039626.1 mouse_genomes_project 2 162788421 162827927 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101444.1 MGP_NODShiLtJ_G0039626.1 mouse_genomes_project 2 162788486 162790752 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0101445.1 MGP_NODShiLtJ_G0039626.1 mouse_genomes_project 2 162789202 162790759 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0017589.1 MGP_NODShiLtJ_G0015265.1 mouse_genomes_project 2 12743547 12766546 + Gm13266 processed_transcript retained_intron MGP_NODShiLtJ_T0017590.1 MGP_NODShiLtJ_G0015265.1 mouse_genomes_project 2 12743547 12773570 + Gm13266 processed_transcript lincRNA MGP_NODShiLtJ_T0017591.1 MGP_NODShiLtJ_G0015265.1 mouse_genomes_project 2 12743555 12766366 + Gm13266 processed_transcript lincRNA MGP_NODShiLtJ_T0100353.1 MGP_NODShiLtJ_G0038747.1 mouse_genomes_project 2 32447032 32447117 + Gm22192 snoRNA snoRNA MGP_NODShiLtJ_T0013371.1 MGP_NODShiLtJ_G0011479.1 mouse_genomes_project 2 35962051 35962573 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054191.1 MGP_NODShiLtJ_G0025513.1 mouse_genomes_project 2 37437521 37438463 - MGP_NODShiLtJ_P0054191 Olfr3 protein_coding protein_coding MGP_NODShiLtJ_T0052242.1 MGP_NODShiLtJ_G0025184.1 mouse_genomes_project 2 9578222 9634379 + MGP_NODShiLtJ_P0052242 Il2ra protein_coding protein_coding MGP_NODShiLtJ_T0052243.1 MGP_NODShiLtJ_G0025184.1 mouse_genomes_project 2 9578264 9584160 + MGP_NODShiLtJ_P0052243 Il2ra protein_coding protein_coding MGP_NODShiLtJ_T0052244.1 MGP_NODShiLtJ_G0025184.1 mouse_genomes_project 2 9617619 9618121 + Il2ra protein_coding retained_intron MGP_NODShiLtJ_T0056329.1 MGP_NODShiLtJ_G0026080.1 mouse_genomes_project 2 126073805 126074744 + MGP_NODShiLtJ_P0056329 Olfr1288 protein_coding protein_coding MGP_NODShiLtJ_T0004010.1 MGP_NODShiLtJ_G0003550.1 mouse_genomes_project 2 132149959 132192729 - Gm13990 antisense antisense MGP_NODShiLtJ_T0017686.1 MGP_NODShiLtJ_G0015324.1 mouse_genomes_project 2 128936909 128951350 + A530058N18Rik processed_transcript antisense MGP_NODShiLtJ_T0017687.1 MGP_NODShiLtJ_G0015324.1 mouse_genomes_project 2 128937017 128955642 + A530058N18Rik processed_transcript antisense MGP_NODShiLtJ_T0017688.1 MGP_NODShiLtJ_G0015324.1 mouse_genomes_project 2 128937018 128954934 + A530058N18Rik processed_transcript antisense MGP_NODShiLtJ_T0017689.1 MGP_NODShiLtJ_G0015324.1 mouse_genomes_project 2 128937020 128955455 + A530058N18Rik processed_transcript antisense MGP_NODShiLtJ_T0017690.1 MGP_NODShiLtJ_G0015324.1 mouse_genomes_project 2 128937033 128943975 + A530058N18Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017691.1 MGP_NODShiLtJ_G0015324.1 mouse_genomes_project 2 128937051 128940817 + A530058N18Rik processed_transcript antisense MGP_NODShiLtJ_T0017692.1 MGP_NODShiLtJ_G0015324.1 mouse_genomes_project 2 128937052 128954802 + A530058N18Rik processed_transcript antisense MGP_NODShiLtJ_T0056896.1 MGP_NODShiLtJ_G0026208.1 mouse_genomes_project 2 137158890 137164169 - MGP_NODShiLtJ_P0056896 Ell3 protein_coding protein_coding MGP_NODShiLtJ_T0056897.1 MGP_NODShiLtJ_G0026208.1 mouse_genomes_project 2 137158907 137162483 - MGP_NODShiLtJ_P0056897 Ell3 protein_coding protein_coding MGP_NODShiLtJ_T0056899.1 MGP_NODShiLtJ_G0026208.1 mouse_genomes_project 2 137159860 137161033 - Ell3 protein_coding retained_intron MGP_NODShiLtJ_T0017738.1 MGP_NODShiLtJ_G0015347.1 mouse_genomes_project 2 171480817 171510689 + Gm14164 processed_transcript processed_transcript MGP_NODShiLtJ_T0017739.1 MGP_NODShiLtJ_G0015347.1 mouse_genomes_project 2 171510111 171510513 + Gm14164 processed_transcript processed_transcript MGP_NODShiLtJ_T0013600.1 MGP_NODShiLtJ_G0011708.1 mouse_genomes_project 2 124391372 124392357 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054860.1 MGP_NODShiLtJ_G0025642.1 mouse_genomes_project 2 76690691 76700917 + MGP_NODShiLtJ_P0054860 Ssb protein_coding protein_coding MGP_NODShiLtJ_T0054861.1 MGP_NODShiLtJ_G0025642.1 mouse_genomes_project 2 76690691 76700977 + MGP_NODShiLtJ_P0054861 Ssb protein_coding protein_coding MGP_NODShiLtJ_T0054862.1 MGP_NODShiLtJ_G0025642.1 mouse_genomes_project 2 76690752 76700641 + MGP_NODShiLtJ_P0054862 Ssb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054863.1 MGP_NODShiLtJ_G0025642.1 mouse_genomes_project 2 76690815 76696679 + MGP_NODShiLtJ_P0054863 Ssb protein_coding protein_coding MGP_NODShiLtJ_T0054864.1 MGP_NODShiLtJ_G0025642.1 mouse_genomes_project 2 76692418 76698278 + Ssb protein_coding processed_transcript MGP_NODShiLtJ_T0054865.1 MGP_NODShiLtJ_G0025642.1 mouse_genomes_project 2 76697906 76700641 + MGP_NODShiLtJ_P0054865 Ssb protein_coding protein_coding MGP_NODShiLtJ_T0056169.1 MGP_NODShiLtJ_G0026037.1 mouse_genomes_project 2 117296056 117325532 + MGP_NODShiLtJ_P0056169 Cd59a protein_coding protein_coding MGP_NODShiLtJ_T0056170.1 MGP_NODShiLtJ_G0026037.1 mouse_genomes_project 2 117296095 117323111 + Cd59a protein_coding processed_transcript MGP_NODShiLtJ_T0007148.1 MGP_NODShiLtJ_G0005854.1 mouse_genomes_project 2 56801197 56804979 - Gm26603 lincRNA lincRNA MGP_NODShiLtJ_T0013624.1 MGP_NODShiLtJ_G0011732.1 mouse_genomes_project 2 137108428 137108675 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055551.1 MGP_NODShiLtJ_G0025875.1 mouse_genomes_project 2 98222308 98223259 - MGP_NODShiLtJ_P0055551 Olfr1166 protein_coding protein_coding MGP_NODShiLtJ_T0055517.1 MGP_NODShiLtJ_G0025844.1 mouse_genomes_project 2 97383268 97557342 - MGP_NODShiLtJ_P0055517 protein_coding protein_coding MGP_NODShiLtJ_T0055523.1 MGP_NODShiLtJ_G0025844.1 mouse_genomes_project 2 97551199 97557342 - protein_coding processed_transcript MGP_NODShiLtJ_T0056366.1 MGP_NODShiLtJ_G0026106.1 mouse_genomes_project 2 127173712 127208876 + MGP_NODShiLtJ_P0056366 Katnbl1 protein_coding protein_coding MGP_NODShiLtJ_T0056367.1 MGP_NODShiLtJ_G0026106.1 mouse_genomes_project 2 127173727 127202116 + Katnbl1 protein_coding retained_intron MGP_NODShiLtJ_T0001026.1 MGP_NODShiLtJ_G0000952.1 mouse_genomes_project 2 12953459 12956133 + TEC TEC MGP_NODShiLtJ_T0099088.1 MGP_NODShiLtJ_G0037482.1 mouse_genomes_project 2 1418255 1418362 - Gm23691 snRNA snRNA MGP_NODShiLtJ_T0052710.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24837677 24849425 - MGP_NODShiLtJ_P0052710 Nelfb protein_coding protein_coding MGP_NODShiLtJ_T0052711.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24837678 24849425 - MGP_NODShiLtJ_P0052711 Nelfb protein_coding protein_coding MGP_NODShiLtJ_T0052712.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24837681 24849317 - Nelfb protein_coding retained_intron MGP_NODShiLtJ_T0052713.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24838003 24841760 - Nelfb protein_coding retained_intron MGP_NODShiLtJ_T0052714.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24838650 24841888 - MGP_NODShiLtJ_P0052714 Nelfb protein_coding protein_coding MGP_NODShiLtJ_T0052715.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24839119 24841568 - Nelfb protein_coding retained_intron MGP_NODShiLtJ_T0052716.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24841857 24848662 - MGP_NODShiLtJ_P0052716 Nelfb protein_coding protein_coding MGP_NODShiLtJ_T0052717.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24841917 24848010 - Nelfb protein_coding processed_transcript MGP_NODShiLtJ_T0052718.1 MGP_NODShiLtJ_G0025261.1 mouse_genomes_project 2 24843135 24848636 - Nelfb protein_coding retained_intron MGP_NODShiLtJ_T0017765.1 MGP_NODShiLtJ_G0015357.1 mouse_genomes_project 2 182808689 182815853 + 9430021M05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0056006.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105090902 105095135 - Alkbh3 protein_coding processed_transcript MGP_NODShiLtJ_T0056007.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105090902 105095166 - Alkbh3 protein_coding processed_transcript MGP_NODShiLtJ_T0056008.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105090902 105122048 - MGP_NODShiLtJ_P0056008 Alkbh3 protein_coding protein_coding MGP_NODShiLtJ_T0056009.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105090981 105091979 - Alkbh3 protein_coding processed_transcript MGP_NODShiLtJ_T0056010.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105090989 105121971 - MGP_NODShiLtJ_P0056010 Alkbh3 protein_coding protein_coding MGP_NODShiLtJ_T0056011.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105106491 105121672 - Alkbh3 protein_coding processed_transcript MGP_NODShiLtJ_T0056012.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105106560 105115438 - Alkbh3 protein_coding processed_transcript MGP_NODShiLtJ_T0056013.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105106560 105121995 - MGP_NODShiLtJ_P0056013 Alkbh3 protein_coding protein_coding MGP_NODShiLtJ_T0056014.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105116024 105121995 - Alkbh3 protein_coding processed_transcript MGP_NODShiLtJ_T0056015.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105116494 105121993 - Alkbh3 protein_coding processed_transcript MGP_NODShiLtJ_T0056016.1 MGP_NODShiLtJ_G0026007.1 mouse_genomes_project 2 105118287 105121993 - Alkbh3 protein_coding processed_transcript MGP_NODShiLtJ_T0007355.1 MGP_NODShiLtJ_G0006023.1 mouse_genomes_project 2 189999682 190003644 + Gm14258 lincRNA lincRNA MGP_NODShiLtJ_T0055683.1 MGP_NODShiLtJ_G0025958.1 mouse_genomes_project 2 101719179 101723844 + MGP_NODShiLtJ_P0055683 C1qtnf4 protein_coding protein_coding MGP_NODShiLtJ_T0013352.1 MGP_NODShiLtJ_G0011460.1 mouse_genomes_project 2 25228412 25228653 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013711.1 MGP_NODShiLtJ_G0011819.1 mouse_genomes_project 2 174977531 174977846 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013495.1 MGP_NODShiLtJ_G0011603.1 mouse_genomes_project 2 84816357 84816963 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055587.1 MGP_NODShiLtJ_G0025910.1 mouse_genomes_project 2 99511819 99512755 - MGP_NODShiLtJ_P0055587 Olfr1221 protein_coding protein_coding MGP_NODShiLtJ_T0013436.1 MGP_NODShiLtJ_G0011544.1 mouse_genomes_project 2 62520962 62521505 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059320.1 MGP_NODShiLtJ_G0026786.1 mouse_genomes_project 2 195827690 195834852 + MGP_NODShiLtJ_P0059320 Tubb1 protein_coding protein_coding MGP_NODShiLtJ_T0057880.1 MGP_NODShiLtJ_G0026452.1 mouse_genomes_project 2 169782238 169792315 - Abhd12 protein_coding processed_transcript MGP_NODShiLtJ_T0057881.1 MGP_NODShiLtJ_G0026452.1 mouse_genomes_project 2 169782238 169857986 - MGP_NODShiLtJ_P0057881 Abhd12 protein_coding protein_coding MGP_NODShiLtJ_T0057882.1 MGP_NODShiLtJ_G0026452.1 mouse_genomes_project 2 169782262 169857976 - MGP_NODShiLtJ_P0057882 Abhd12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057883.1 MGP_NODShiLtJ_G0026452.1 mouse_genomes_project 2 169782861 169789451 - MGP_NODShiLtJ_P0057883 Abhd12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057884.1 MGP_NODShiLtJ_G0026452.1 mouse_genomes_project 2 169787097 169857907 - Abhd12 protein_coding processed_transcript MGP_NODShiLtJ_T0057885.1 MGP_NODShiLtJ_G0026452.1 mouse_genomes_project 2 169792767 169802722 - Abhd12 protein_coding retained_intron MGP_NODShiLtJ_T0057886.1 MGP_NODShiLtJ_G0026452.1 mouse_genomes_project 2 169797612 169857892 - MGP_NODShiLtJ_P0057886 Abhd12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055430.1 MGP_NODShiLtJ_G0025766.1 mouse_genomes_project 2 94595596 94613360 - MGP_NODShiLtJ_P0055430 Olfr1002 protein_coding protein_coding MGP_NODShiLtJ_T0098298.1 MGP_NODShiLtJ_G0036704.1 mouse_genomes_project 2 1162230 1165874 + Gm37814 sense_intronic sense_intronic MGP_NODShiLtJ_T0054441.1 MGP_NODShiLtJ_G0025566.1 mouse_genomes_project 2 55806587 55835041 - MGP_NODShiLtJ_P0054441 Nmi protein_coding protein_coding MGP_NODShiLtJ_T0054442.1 MGP_NODShiLtJ_G0025566.1 mouse_genomes_project 2 55806601 55834823 - MGP_NODShiLtJ_P0054442 Nmi protein_coding protein_coding MGP_NODShiLtJ_T0054443.1 MGP_NODShiLtJ_G0025566.1 mouse_genomes_project 2 55806605 55834835 - MGP_NODShiLtJ_P0054443 Nmi protein_coding protein_coding MGP_NODShiLtJ_T0054444.1 MGP_NODShiLtJ_G0025566.1 mouse_genomes_project 2 55806625 55810683 - MGP_NODShiLtJ_P0054444 Nmi protein_coding protein_coding MGP_NODShiLtJ_T0054445.1 MGP_NODShiLtJ_G0025566.1 mouse_genomes_project 2 55816734 55835298 - MGP_NODShiLtJ_P0054445 Nmi protein_coding protein_coding MGP_NODShiLtJ_T0054446.1 MGP_NODShiLtJ_G0025566.1 mouse_genomes_project 2 55821014 55834791 - Nmi protein_coding retained_intron MGP_NODShiLtJ_T0004028.1 MGP_NODShiLtJ_G0003565.1 mouse_genomes_project 2 145666270 145667745 - Gm14029 antisense antisense MGP_NODShiLtJ_T0013284.1 MGP_NODShiLtJ_G0011392.1 mouse_genomes_project 2 17224 17740 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055496.1 MGP_NODShiLtJ_G0025831.1 mouse_genomes_project 2 96942806 96960683 + MGP_NODShiLtJ_P0055496 Olfr1115 protein_coding protein_coding MGP_NODShiLtJ_T0054767.1 MGP_NODShiLtJ_G0025621.1 mouse_genomes_project 2 72815792 73004515 - MGP_NODShiLtJ_P0054767 Scn9a protein_coding protein_coding MGP_NODShiLtJ_T0054768.1 MGP_NODShiLtJ_G0025621.1 mouse_genomes_project 2 72815792 73004515 - MGP_NODShiLtJ_P0054768 Scn9a protein_coding protein_coding MGP_NODShiLtJ_T0054769.1 MGP_NODShiLtJ_G0025621.1 mouse_genomes_project 2 72819997 73004216 - MGP_NODShiLtJ_P0054769 Scn9a protein_coding protein_coding MGP_NODShiLtJ_T0054770.1 MGP_NODShiLtJ_G0025621.1 mouse_genomes_project 2 72819997 73004216 - MGP_NODShiLtJ_P0054770 Scn9a protein_coding protein_coding MGP_NODShiLtJ_T0054771.1 MGP_NODShiLtJ_G0025621.1 mouse_genomes_project 2 72821019 73004216 - MGP_NODShiLtJ_P0054771 Scn9a protein_coding protein_coding MGP_NODShiLtJ_T0054772.1 MGP_NODShiLtJ_G0025621.1 mouse_genomes_project 2 72897980 72901141 - Scn9a protein_coding retained_intron MGP_NODShiLtJ_T0054773.1 MGP_NODShiLtJ_G0025621.1 mouse_genomes_project 2 72925848 73004525 - Scn9a protein_coding retained_intron MGP_NODShiLtJ_T0007330.1 MGP_NODShiLtJ_G0006003.1 mouse_genomes_project 2 186487725 186497756 - Platr29 lincRNA lincRNA MGP_NODShiLtJ_T0054851.1 MGP_NODShiLtJ_G0025640.1 mouse_genomes_project 2 76609228 76616455 + MGP_NODShiLtJ_P0054851 Phospho2 protein_coding protein_coding MGP_NODShiLtJ_T0054852.1 MGP_NODShiLtJ_G0025640.1 mouse_genomes_project 2 76609241 76618025 + MGP_NODShiLtJ_P0054852 Phospho2 protein_coding protein_coding MGP_NODShiLtJ_T0054853.1 MGP_NODShiLtJ_G0025640.1 mouse_genomes_project 2 76609255 76618025 + MGP_NODShiLtJ_P0054853 Phospho2 protein_coding protein_coding MGP_NODShiLtJ_T0054854.1 MGP_NODShiLtJ_G0025640.1 mouse_genomes_project 2 76609265 76613252 + Phospho2 protein_coding processed_transcript MGP_NODShiLtJ_T0054855.1 MGP_NODShiLtJ_G0025640.1 mouse_genomes_project 2 76609317 76620565 + Phospho2 protein_coding processed_transcript MGP_NODShiLtJ_T0054856.1 MGP_NODShiLtJ_G0025640.1 mouse_genomes_project 2 76611752 76618024 + MGP_NODShiLtJ_P0054856 Phospho2 protein_coding protein_coding MGP_NODShiLtJ_T0056017.1 MGP_NODShiLtJ_G0026008.1 mouse_genomes_project 2 105145627 105180646 - Hsd17b12 protein_coding processed_transcript MGP_NODShiLtJ_T0056018.1 MGP_NODShiLtJ_G0026008.1 mouse_genomes_project 2 105145627 105278328 - MGP_NODShiLtJ_P0056018 Hsd17b12 protein_coding protein_coding MGP_NODShiLtJ_T0056019.1 MGP_NODShiLtJ_G0026008.1 mouse_genomes_project 2 105145640 105278272 - Hsd17b12 protein_coding processed_transcript MGP_NODShiLtJ_T0056020.1 MGP_NODShiLtJ_G0026008.1 mouse_genomes_project 2 105146460 105180941 - Hsd17b12 protein_coding processed_transcript MGP_NODShiLtJ_T0056021.1 MGP_NODShiLtJ_G0026008.1 mouse_genomes_project 2 105233212 105278256 - Hsd17b12 protein_coding processed_transcript MGP_NODShiLtJ_T0052581.1 MGP_NODShiLtJ_G0025240.1 mouse_genomes_project 2 23543509 23569261 - MGP_NODShiLtJ_P0052581 Tbpl2 protein_coding protein_coding MGP_NODShiLtJ_T0052582.1 MGP_NODShiLtJ_G0025240.1 mouse_genomes_project 2 23543703 23569198 - MGP_NODShiLtJ_P0052582 Tbpl2 protein_coding protein_coding MGP_NODShiLtJ_T0100386.1 MGP_NODShiLtJ_G0038780.1 mouse_genomes_project 2 117852161 117852293 + Gm22439 snoRNA snoRNA MGP_NODShiLtJ_T0057157.1 MGP_NODShiLtJ_G0026271.1 mouse_genomes_project 2 143641833 143655079 + MGP_NODShiLtJ_P0057157 Tmem127 protein_coding protein_coding MGP_NODShiLtJ_T0057158.1 MGP_NODShiLtJ_G0026271.1 mouse_genomes_project 2 143641894 143651101 + MGP_NODShiLtJ_P0057158 Tmem127 protein_coding protein_coding MGP_NODShiLtJ_T0057159.1 MGP_NODShiLtJ_G0026271.1 mouse_genomes_project 2 143641898 143651473 + MGP_NODShiLtJ_P0057159 Tmem127 protein_coding protein_coding MGP_NODShiLtJ_T0011381.1 MGP_NODShiLtJ_G0009514.1 mouse_genomes_project 2 24180311 24180636 + Gm25455 misc_RNA misc_RNA MGP_NODShiLtJ_T0013411.1 MGP_NODShiLtJ_G0011519.1 mouse_genomes_project 2 54115905 54116187 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055612.1 MGP_NODShiLtJ_G0025931.1 mouse_genomes_project 2 100168736 100169681 - MGP_NODShiLtJ_P0055612 Olfr1247 protein_coding protein_coding MGP_NODShiLtJ_T0055613.1 MGP_NODShiLtJ_G0025931.1 mouse_genomes_project 2 100168736 100173645 - MGP_NODShiLtJ_P0055613 Olfr1247 protein_coding protein_coding MGP_NODShiLtJ_T0055614.1 MGP_NODShiLtJ_G0025931.1 mouse_genomes_project 2 100169437 100171226 - MGP_NODShiLtJ_P0055614 Olfr1247 protein_coding protein_coding MGP_NODShiLtJ_T0056749.1 MGP_NODShiLtJ_G0026187.1 mouse_genomes_project 2 136276236 136289067 + MGP_NODShiLtJ_P0056749 Haus2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056750.1 MGP_NODShiLtJ_G0026187.1 mouse_genomes_project 2 136276306 136288379 + MGP_NODShiLtJ_P0056750 Haus2 protein_coding protein_coding MGP_NODShiLtJ_T0098007.1 MGP_NODShiLtJ_G0036419.1 mouse_genomes_project 2 104457170 104457273 - Gm23380 rRNA rRNA MGP_NODShiLtJ_T0003844.1 MGP_NODShiLtJ_G0003434.1 mouse_genomes_project 2 10313628 10324097 + E030013I19Rik antisense antisense MGP_NODShiLtJ_T0003845.1 MGP_NODShiLtJ_G0003434.1 mouse_genomes_project 2 10313999 10325112 + E030013I19Rik antisense antisense MGP_NODShiLtJ_T0004114.1 MGP_NODShiLtJ_G0003629.1 mouse_genomes_project 2 186366784 186368805 + Gm11465 antisense antisense MGP_NODShiLtJ_T0054208.1 MGP_NODShiLtJ_G0025529.1 mouse_genomes_project 2 38040586 38058001 - MGP_NODShiLtJ_P0054208 Pdcl protein_coding protein_coding MGP_NODShiLtJ_T0054209.1 MGP_NODShiLtJ_G0025529.1 mouse_genomes_project 2 38042320 38057922 - MGP_NODShiLtJ_P0054209 Pdcl protein_coding protein_coding MGP_NODShiLtJ_T0054210.1 MGP_NODShiLtJ_G0025529.1 mouse_genomes_project 2 38043715 38057858 - MGP_NODShiLtJ_P0054210 Pdcl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054211.1 MGP_NODShiLtJ_G0025529.1 mouse_genomes_project 2 38043754 38057865 - MGP_NODShiLtJ_P0054211 Pdcl protein_coding protein_coding MGP_NODShiLtJ_T0056582.1 MGP_NODShiLtJ_G0026160.1 mouse_genomes_project 2 135075480 135108127 - MGP_NODShiLtJ_P0056582 Exd1 protein_coding protein_coding MGP_NODShiLtJ_T0056583.1 MGP_NODShiLtJ_G0026160.1 mouse_genomes_project 2 135075486 135102175 - MGP_NODShiLtJ_P0056583 Exd1 protein_coding protein_coding MGP_NODShiLtJ_T0056584.1 MGP_NODShiLtJ_G0026160.1 mouse_genomes_project 2 135099513 135107694 - MGP_NODShiLtJ_P0056584 Exd1 protein_coding protein_coding MGP_NODShiLtJ_T0056383.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128200981 128629072 + MGP_NODShiLtJ_P0056383 Fmn1 protein_coding protein_coding MGP_NODShiLtJ_T0056384.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128201016 128395773 + Fmn1 protein_coding processed_transcript MGP_NODShiLtJ_T0056385.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128201027 128622168 + MGP_NODShiLtJ_P0056385 Fmn1 protein_coding protein_coding MGP_NODShiLtJ_T0056386.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128241810 128621919 + MGP_NODShiLtJ_P0056386 Fmn1 protein_coding protein_coding MGP_NODShiLtJ_T0056387.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128335789 128622168 + MGP_NODShiLtJ_P0056387 Fmn1 protein_coding protein_coding MGP_NODShiLtJ_T0056388.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128595871 128603946 + Fmn1 protein_coding processed_transcript MGP_NODShiLtJ_T0056389.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128595886 128622047 + Fmn1 protein_coding processed_transcript MGP_NODShiLtJ_T0056390.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128595886 128622165 + Fmn1 protein_coding processed_transcript MGP_NODShiLtJ_T0056391.1 MGP_NODShiLtJ_G0026112.1 mouse_genomes_project 2 128620983 128622043 + Fmn1 protein_coding processed_transcript MGP_NODShiLtJ_T0056958.1 MGP_NODShiLtJ_G0026222.1 mouse_genomes_project 2 137925931 138003187 - MGP_NODShiLtJ_P0056958 Patl2 protein_coding protein_coding MGP_NODShiLtJ_T0013589.1 MGP_NODShiLtJ_G0011697.1 mouse_genomes_project 2 119723291 119723561 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054504.1 MGP_NODShiLtJ_G0025579.1 mouse_genomes_project 2 62174859 62183045 - MGP_NODShiLtJ_P0054504 Nr4a2 protein_coding protein_coding MGP_NODShiLtJ_T0054505.1 MGP_NODShiLtJ_G0025579.1 mouse_genomes_project 2 62174863 62192866 - MGP_NODShiLtJ_P0054505 Nr4a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054506.1 MGP_NODShiLtJ_G0025579.1 mouse_genomes_project 2 62180060 62183094 - Nr4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0054507.1 MGP_NODShiLtJ_G0025579.1 mouse_genomes_project 2 62181048 62182429 - Nr4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0058174.1 MGP_NODShiLtJ_G0026538.1 mouse_genomes_project 2 173970409 173971910 + MGP_NODShiLtJ_P0058174 Actl10 protein_coding protein_coding MGP_NODShiLtJ_T0007076.1 MGP_NODShiLtJ_G0005799.1 mouse_genomes_project 2 6921401 6934211 + lincRNA lincRNA MGP_NODShiLtJ_T0052959.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25631261 25679942 - MGP_NODShiLtJ_P0052959 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052960.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25633545 25696660 - MGP_NODShiLtJ_P0052960 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052961.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25633751 25639381 - protein_coding processed_transcript MGP_NODShiLtJ_T0052962.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25633762 25638434 - protein_coding processed_transcript MGP_NODShiLtJ_T0052963.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25644002 25696783 - MGP_NODShiLtJ_P0052963 protein_coding protein_coding MGP_NODShiLtJ_T0052964.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25650799 25680071 - MGP_NODShiLtJ_P0052964 protein_coding protein_coding MGP_NODShiLtJ_T0052965.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25650818 25677996 - MGP_NODShiLtJ_P0052965 protein_coding protein_coding MGP_NODShiLtJ_T0052966.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25650992 25679979 - MGP_NODShiLtJ_P0052966 protein_coding protein_coding MGP_NODShiLtJ_T0052967.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25666499 25696930 - MGP_NODShiLtJ_P0052967 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052968.1 MGP_NODShiLtJ_G0025313.1 mouse_genomes_project 2 25677989 25696778 - MGP_NODShiLtJ_P0052968 protein_coding protein_coding MGP_NODShiLtJ_T0099114.1 MGP_NODShiLtJ_G0037508.1 mouse_genomes_project 2 83068204 83068303 - Gm24996 snRNA snRNA MGP_NODShiLtJ_T0010324.1 MGP_NODShiLtJ_G0008457.1 mouse_genomes_project 2 88528159 88528245 - Mir684-1 miRNA miRNA MGP_NODShiLtJ_T0057752.1 MGP_NODShiLtJ_G0026411.1 mouse_genomes_project 2 164190675 164229640 + MGP_NODShiLtJ_P0057752 Rin2 protein_coding protein_coding MGP_NODShiLtJ_T0057753.1 MGP_NODShiLtJ_G0026411.1 mouse_genomes_project 2 164191921 164295268 + MGP_NODShiLtJ_P0057753 Rin2 protein_coding protein_coding MGP_NODShiLtJ_T0057754.1 MGP_NODShiLtJ_G0026411.1 mouse_genomes_project 2 164192057 164295268 + MGP_NODShiLtJ_P0057754 Rin2 protein_coding protein_coding MGP_NODShiLtJ_T0057755.1 MGP_NODShiLtJ_G0026411.1 mouse_genomes_project 2 164192103 164230042 + MGP_NODShiLtJ_P0057755 Rin2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057756.1 MGP_NODShiLtJ_G0026411.1 mouse_genomes_project 2 164229487 164252163 + Rin2 protein_coding processed_transcript MGP_NODShiLtJ_T0057757.1 MGP_NODShiLtJ_G0026411.1 mouse_genomes_project 2 164229626 164252432 + Rin2 protein_coding processed_transcript MGP_NODShiLtJ_T0057758.1 MGP_NODShiLtJ_G0026411.1 mouse_genomes_project 2 164270400 164286623 + Rin2 protein_coding processed_transcript MGP_NODShiLtJ_T0100429.1 MGP_NODShiLtJ_G0038823.1 mouse_genomes_project 2 189752595 189752724 - Gm25214 snoRNA snoRNA MGP_NODShiLtJ_T0010276.1 MGP_NODShiLtJ_G0008409.1 mouse_genomes_project 2 21810137 21810205 + Mir3967 miRNA miRNA MGP_NODShiLtJ_T0057335.1 MGP_NODShiLtJ_G0026317.1 mouse_genomes_project 2 146947427 146954224 - MGP_NODShiLtJ_P0057335 Cpxm1 protein_coding protein_coding MGP_NODShiLtJ_T0057336.1 MGP_NODShiLtJ_G0026317.1 mouse_genomes_project 2 146947428 146949928 - Cpxm1 protein_coding retained_intron MGP_NODShiLtJ_T0003879.1 MGP_NODShiLtJ_G0003459.1 mouse_genomes_project 2 26958593 27007031 + Sardhos antisense antisense MGP_NODShiLtJ_T0056549.1 MGP_NODShiLtJ_G0026149.1 mouse_genomes_project 2 134702588 134706889 + MGP_NODShiLtJ_P0056549 Gchfr protein_coding protein_coding MGP_NODShiLtJ_T0101819.1 MGP_NODShiLtJ_G0039987.1 mouse_genomes_project 2 97353875 97354733 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0097798.1 MGP_NODShiLtJ_G0036210.1 mouse_genomes_project 2 102869454 102869855 - pseudogene pseudogene MGP_NODShiLtJ_T0053819.1 MGP_NODShiLtJ_G0025444.1 mouse_genomes_project 2 32647692 32660328 + MGP_NODShiLtJ_P0053819 Ptges2 protein_coding protein_coding MGP_NODShiLtJ_T0053820.1 MGP_NODShiLtJ_G0025444.1 mouse_genomes_project 2 32648236 32655587 + MGP_NODShiLtJ_P0053820 Ptges2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053821.1 MGP_NODShiLtJ_G0025444.1 mouse_genomes_project 2 32650932 32656140 + Ptges2 protein_coding retained_intron MGP_NODShiLtJ_T0017585.1 MGP_NODShiLtJ_G0015263.1 mouse_genomes_project 2 11399433 11459432 + Gm13270 processed_transcript antisense MGP_NODShiLtJ_T0017586.1 MGP_NODShiLtJ_G0015263.1 mouse_genomes_project 2 11399434 11402229 + Gm13270 processed_transcript retained_intron MGP_NODShiLtJ_T0058055.1 MGP_NODShiLtJ_G0026505.1 mouse_genomes_project 2 172279900 172297205 + Ccm2l protein_coding processed_transcript MGP_NODShiLtJ_T0058056.1 MGP_NODShiLtJ_G0026505.1 mouse_genomes_project 2 172279929 172285089 + Ccm2l protein_coding processed_transcript MGP_NODShiLtJ_T0058057.1 MGP_NODShiLtJ_G0026505.1 mouse_genomes_project 2 172279943 172284918 + MGP_NODShiLtJ_P0058057 Ccm2l protein_coding protein_coding MGP_NODShiLtJ_T0058058.1 MGP_NODShiLtJ_G0026505.1 mouse_genomes_project 2 172279947 172297205 + MGP_NODShiLtJ_P0058058 Ccm2l protein_coding protein_coding MGP_NODShiLtJ_T0058059.1 MGP_NODShiLtJ_G0026505.1 mouse_genomes_project 2 172279952 172297205 + MGP_NODShiLtJ_P0058059 Ccm2l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055203.1 MGP_NODShiLtJ_G0025712.1 mouse_genomes_project 2 86521154 86524119 + MGP_NODShiLtJ_P0055203 Ube2e3 protein_coding protein_coding MGP_NODShiLtJ_T0055204.1 MGP_NODShiLtJ_G0025712.1 mouse_genomes_project 2 86521214 86570114 + MGP_NODShiLtJ_P0055204 Ube2e3 protein_coding protein_coding MGP_NODShiLtJ_T0055205.1 MGP_NODShiLtJ_G0025712.1 mouse_genomes_project 2 86522566 86580602 + MGP_NODShiLtJ_P0055205 Ube2e3 protein_coding protein_coding MGP_NODShiLtJ_T0055206.1 MGP_NODShiLtJ_G0025712.1 mouse_genomes_project 2 86522747 86570926 + Ube2e3 protein_coding retained_intron MGP_NODShiLtJ_T0055207.1 MGP_NODShiLtJ_G0025712.1 mouse_genomes_project 2 86522841 86526300 + Ube2e3 protein_coding retained_intron MGP_NODShiLtJ_T0055208.1 MGP_NODShiLtJ_G0025712.1 mouse_genomes_project 2 86523189 86579606 + MGP_NODShiLtJ_P0055208 Ube2e3 protein_coding protein_coding MGP_NODShiLtJ_T0055209.1 MGP_NODShiLtJ_G0025712.1 mouse_genomes_project 2 86577701 86579361 + Ube2e3 protein_coding retained_intron MGP_NODShiLtJ_T0013288.1 MGP_NODShiLtJ_G0011396.1 mouse_genomes_project 2 1070310 1071607 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003868.1 MGP_NODShiLtJ_G0003452.1 mouse_genomes_project 2 25479447 25481853 + antisense antisense MGP_NODShiLtJ_T0011403.1 MGP_NODShiLtJ_G0009536.1 mouse_genomes_project 2 143877829 143878121 - Gm22613 misc_RNA misc_RNA MGP_NODShiLtJ_T0003838.1 MGP_NODShiLtJ_G0003428.1 mouse_genomes_project 2 3414851 3548205 + A230108P19Rik antisense antisense MGP_NODShiLtJ_T0007287.1 MGP_NODShiLtJ_G0005967.1 mouse_genomes_project 2 165003430 165007676 + 4933406D12Rik lincRNA lincRNA MGP_NODShiLtJ_T0007175.1 MGP_NODShiLtJ_G0005877.1 mouse_genomes_project 2 81375000 81391066 + Gm13667 lincRNA lincRNA MGP_NODShiLtJ_T0055262.1 MGP_NODShiLtJ_G0025723.1 mouse_genomes_project 2 88516087 88530624 + MGP_NODShiLtJ_P0055262 Dusp19 protein_coding protein_coding MGP_NODShiLtJ_T0055263.1 MGP_NODShiLtJ_G0025723.1 mouse_genomes_project 2 88516142 88530693 + Dusp19 protein_coding processed_transcript MGP_NODShiLtJ_T0055264.1 MGP_NODShiLtJ_G0025723.1 mouse_genomes_project 2 88516268 88529766 + Dusp19 protein_coding processed_transcript MGP_NODShiLtJ_T0055265.1 MGP_NODShiLtJ_G0025723.1 mouse_genomes_project 2 88516273 88523308 + Dusp19 protein_coding processed_transcript MGP_NODShiLtJ_T0055267.1 MGP_NODShiLtJ_G0025723.1 mouse_genomes_project 2 88516308 88531324 + Dusp19 protein_coding processed_transcript MGP_NODShiLtJ_T0051995.1 MGP_NODShiLtJ_G0025141.1 mouse_genomes_project 2 245830 289788 + MGP_NODShiLtJ_P0051995 Nmt2 protein_coding protein_coding MGP_NODShiLtJ_T0051996.1 MGP_NODShiLtJ_G0025141.1 mouse_genomes_project 2 245854 270208 + Nmt2 protein_coding processed_transcript MGP_NODShiLtJ_T0051997.1 MGP_NODShiLtJ_G0025141.1 mouse_genomes_project 2 245870 291950 + MGP_NODShiLtJ_P0051997 Nmt2 protein_coding protein_coding MGP_NODShiLtJ_T0052035.1 MGP_NODShiLtJ_G0025150.1 mouse_genomes_project 2 606185 777592 + MGP_NODShiLtJ_P0052035 Fam107b protein_coding protein_coding MGP_NODShiLtJ_T0052036.1 MGP_NODShiLtJ_G0025150.1 mouse_genomes_project 2 712384 779947 + MGP_NODShiLtJ_P0052036 Fam107b protein_coding protein_coding MGP_NODShiLtJ_T0052037.1 MGP_NODShiLtJ_G0025150.1 mouse_genomes_project 2 712404 777726 + MGP_NODShiLtJ_P0052037 Fam107b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052038.1 MGP_NODShiLtJ_G0025150.1 mouse_genomes_project 2 768647 770911 + MGP_NODShiLtJ_P0052038 Fam107b protein_coding protein_coding MGP_NODShiLtJ_T0052039.1 MGP_NODShiLtJ_G0025150.1 mouse_genomes_project 2 768673 779945 + MGP_NODShiLtJ_P0052039 Fam107b protein_coding protein_coding MGP_NODShiLtJ_T0052040.1 MGP_NODShiLtJ_G0025150.1 mouse_genomes_project 2 771885 777430 + MGP_NODShiLtJ_P0052040 Fam107b protein_coding protein_coding MGP_NODShiLtJ_T0058253.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175043364 175089985 + MGP_NODShiLtJ_P0058253 Acss2 protein_coding protein_coding MGP_NODShiLtJ_T0058254.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175043449 175051605 + Acss2 protein_coding retained_intron MGP_NODShiLtJ_T0058255.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175043473 175114796 + MGP_NODShiLtJ_P0058255 Acss2 protein_coding protein_coding MGP_NODShiLtJ_T0058256.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175043485 175079572 + Acss2 protein_coding retained_intron MGP_NODShiLtJ_T0058257.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175043523 175089319 + MGP_NODShiLtJ_P0058257 Acss2 protein_coding protein_coding MGP_NODShiLtJ_T0058258.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175043523 175089319 + MGP_NODShiLtJ_P0058258 Acss2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058259.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175076404 175077042 + Acss2 protein_coding retained_intron MGP_NODShiLtJ_T0058260.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175076415 175084539 + MGP_NODShiLtJ_P0058260 Acss2 protein_coding protein_coding MGP_NODShiLtJ_T0058265.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175097624 175114338 + Acss2 protein_coding processed_transcript MGP_NODShiLtJ_T0058266.1 MGP_NODShiLtJ_G0026556.1 mouse_genomes_project 2 175101909 175106037 + Acss2 protein_coding retained_intron MGP_NODShiLtJ_T0058561.1 MGP_NODShiLtJ_G0026603.1 mouse_genomes_project 2 177266030 177276962 - MGP_NODShiLtJ_P0058561 Blcap protein_coding protein_coding MGP_NODShiLtJ_T0058562.1 MGP_NODShiLtJ_G0026603.1 mouse_genomes_project 2 177266030 177276938 - MGP_NODShiLtJ_P0058562 Blcap protein_coding protein_coding MGP_NODShiLtJ_T0058563.1 MGP_NODShiLtJ_G0026603.1 mouse_genomes_project 2 177267769 177284258 - MGP_NODShiLtJ_P0058563 Blcap protein_coding protein_coding MGP_NODShiLtJ_T0058564.1 MGP_NODShiLtJ_G0026603.1 mouse_genomes_project 2 177267855 177269675 - Blcap protein_coding processed_transcript MGP_NODShiLtJ_T0058575.1 MGP_NODShiLtJ_G0026603.1 mouse_genomes_project 2 177276191 177276932 - Blcap protein_coding processed_transcript MGP_NODShiLtJ_T0058576.1 MGP_NODShiLtJ_G0026603.1 mouse_genomes_project 2 177277475 177284258 - Blcap protein_coding processed_transcript MGP_NODShiLtJ_T0052520.1 MGP_NODShiLtJ_G0025228.1 mouse_genomes_project 2 21417485 21771017 + MGP_NODShiLtJ_P0052520 Myo3a protein_coding protein_coding MGP_NODShiLtJ_T0052521.1 MGP_NODShiLtJ_G0025228.1 mouse_genomes_project 2 21417487 21511736 + Myo3a protein_coding processed_transcript MGP_NODShiLtJ_T0052522.1 MGP_NODShiLtJ_G0025228.1 mouse_genomes_project 2 21417487 21501063 + Myo3a protein_coding processed_transcript MGP_NODShiLtJ_T0052523.1 MGP_NODShiLtJ_G0025228.1 mouse_genomes_project 2 21446675 21651012 + MGP_NODShiLtJ_P0052523 Myo3a protein_coding protein_coding MGP_NODShiLtJ_T0052524.1 MGP_NODShiLtJ_G0025228.1 mouse_genomes_project 2 21700070 21771012 + MGP_NODShiLtJ_P0052524 Myo3a protein_coding protein_coding MGP_NODShiLtJ_T0052525.1 MGP_NODShiLtJ_G0025228.1 mouse_genomes_project 2 21727990 21755453 + Myo3a protein_coding processed_transcript MGP_NODShiLtJ_T0058667.1 MGP_NODShiLtJ_G0026627.1 mouse_genomes_project 2 180710350 180846505 - Zhx3 protein_coding processed_transcript MGP_NODShiLtJ_T0058675.1 MGP_NODShiLtJ_G0026627.1 mouse_genomes_project 2 180726827 180846079 - MGP_NODShiLtJ_P0058675 Zhx3 protein_coding protein_coding MGP_NODShiLtJ_T0058676.1 MGP_NODShiLtJ_G0026627.1 mouse_genomes_project 2 180727424 180832833 - MGP_NODShiLtJ_P0058676 Zhx3 protein_coding protein_coding MGP_NODShiLtJ_T0058677.1 MGP_NODShiLtJ_G0026627.1 mouse_genomes_project 2 180732086 180846497 - MGP_NODShiLtJ_P0058677 Zhx3 protein_coding protein_coding MGP_NODShiLtJ_T0058678.1 MGP_NODShiLtJ_G0026627.1 mouse_genomes_project 2 180745385 180846336 - MGP_NODShiLtJ_P0058678 Zhx3 protein_coding protein_coding MGP_NODShiLtJ_T0058679.1 MGP_NODShiLtJ_G0026627.1 mouse_genomes_project 2 180745422 180846497 - MGP_NODShiLtJ_P0058679 Zhx3 protein_coding protein_coding MGP_NODShiLtJ_T0001044.1 MGP_NODShiLtJ_G0000970.1 mouse_genomes_project 2 36581041 36584213 - TEC TEC MGP_NODShiLtJ_T0013616.1 MGP_NODShiLtJ_G0011724.1 mouse_genomes_project 2 133966698 133967563 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053293.1 MGP_NODShiLtJ_G0025372.1 mouse_genomes_project 2 28843370 28852139 - MGP_NODShiLtJ_P0053293 Barhl1 protein_coding protein_coding MGP_NODShiLtJ_T0053294.1 MGP_NODShiLtJ_G0025372.1 mouse_genomes_project 2 28843375 28848187 - Barhl1 protein_coding processed_transcript MGP_NODShiLtJ_T0053295.1 MGP_NODShiLtJ_G0025372.1 mouse_genomes_project 2 28844660 28852152 - MGP_NODShiLtJ_P0053295 Barhl1 protein_coding protein_coding MGP_NODShiLtJ_T0053296.1 MGP_NODShiLtJ_G0025372.1 mouse_genomes_project 2 28844660 28852363 - MGP_NODShiLtJ_P0053296 Barhl1 protein_coding protein_coding MGP_NODShiLtJ_T0053297.1 MGP_NODShiLtJ_G0025372.1 mouse_genomes_project 2 28845331 28851232 - Barhl1 protein_coding processed_transcript MGP_NODShiLtJ_T0057337.1 MGP_NODShiLtJ_G0026318.1 mouse_genomes_project 2 146961868 146964895 + MGP_NODShiLtJ_P0057337 Gm28372 protein_coding protein_coding MGP_NODShiLtJ_T0011387.1 MGP_NODShiLtJ_G0009520.1 mouse_genomes_project 2 47651474 47653151 + Gm27404 misc_RNA misc_RNA MGP_NODShiLtJ_T0011386.1 MGP_NODShiLtJ_G0009519.1 mouse_genomes_project 2 47650649 47650710 + Gm27676 misc_RNA misc_RNA MGP_NODShiLtJ_T0053333.1 MGP_NODShiLtJ_G0025378.1 mouse_genomes_project 2 29605440 29736734 + MGP_NODShiLtJ_P0053333 Rapgef1 protein_coding protein_coding MGP_NODShiLtJ_T0053334.1 MGP_NODShiLtJ_G0025378.1 mouse_genomes_project 2 29605469 29737334 + MGP_NODShiLtJ_P0053334 Rapgef1 protein_coding protein_coding MGP_NODShiLtJ_T0053335.1 MGP_NODShiLtJ_G0025378.1 mouse_genomes_project 2 29606788 29734698 + MGP_NODShiLtJ_P0053335 Rapgef1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053336.1 MGP_NODShiLtJ_G0025378.1 mouse_genomes_project 2 29606842 29736733 + MGP_NODShiLtJ_P0053336 Rapgef1 protein_coding protein_coding MGP_NODShiLtJ_T0053337.1 MGP_NODShiLtJ_G0025378.1 mouse_genomes_project 2 29727128 29732219 + Rapgef1 protein_coding processed_transcript MGP_NODShiLtJ_T0053338.1 MGP_NODShiLtJ_G0025378.1 mouse_genomes_project 2 29728908 29730573 + Rapgef1 protein_coding retained_intron MGP_NODShiLtJ_T0052004.1 MGP_NODShiLtJ_G0025145.1 mouse_genomes_project 2 376847 394365 - MGP_NODShiLtJ_P0052004 Meig1 protein_coding protein_coding MGP_NODShiLtJ_T0052005.1 MGP_NODShiLtJ_G0025145.1 mouse_genomes_project 2 376847 390736 - MGP_NODShiLtJ_P0052005 Meig1 protein_coding protein_coding MGP_NODShiLtJ_T0052006.1 MGP_NODShiLtJ_G0025145.1 mouse_genomes_project 2 376850 390758 - MGP_NODShiLtJ_P0052006 Meig1 protein_coding protein_coding MGP_NODShiLtJ_T0052007.1 MGP_NODShiLtJ_G0025145.1 mouse_genomes_project 2 376851 390846 - MGP_NODShiLtJ_P0052007 Meig1 protein_coding protein_coding MGP_NODShiLtJ_T0052008.1 MGP_NODShiLtJ_G0025145.1 mouse_genomes_project 2 376914 390298 - MGP_NODShiLtJ_P0052008 Meig1 protein_coding protein_coding MGP_NODShiLtJ_T0052009.1 MGP_NODShiLtJ_G0025145.1 mouse_genomes_project 2 377071 394311 - MGP_NODShiLtJ_P0052009 Meig1 protein_coding protein_coding MGP_NODShiLtJ_T0013420.1 MGP_NODShiLtJ_G0011528.1 mouse_genomes_project 2 55795842 55796379 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013758.1 MGP_NODShiLtJ_G0011866.1 mouse_genomes_project 2 195816516 195816877 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058859.1 MGP_NODShiLtJ_G0026682.1 mouse_genomes_project 2 184976920 184978243 + MGP_NODShiLtJ_P0058859 Wfdc10 protein_coding protein_coding MGP_NODShiLtJ_T0056513.1 MGP_NODShiLtJ_G0026141.1 mouse_genomes_project 2 134367462 134391318 + MGP_NODShiLtJ_P0056513 Ivd protein_coding protein_coding MGP_NODShiLtJ_T0056514.1 MGP_NODShiLtJ_G0026141.1 mouse_genomes_project 2 134377295 134378200 + Ivd protein_coding processed_transcript MGP_NODShiLtJ_T0056515.1 MGP_NODShiLtJ_G0026141.1 mouse_genomes_project 2 134378225 134382894 + Ivd protein_coding processed_transcript MGP_NODShiLtJ_T0056516.1 MGP_NODShiLtJ_G0026141.1 mouse_genomes_project 2 134378705 134380701 + Ivd protein_coding retained_intron MGP_NODShiLtJ_T0056517.1 MGP_NODShiLtJ_G0026141.1 mouse_genomes_project 2 134380246 134388937 + Ivd protein_coding processed_transcript MGP_NODShiLtJ_T0056518.1 MGP_NODShiLtJ_G0026141.1 mouse_genomes_project 2 134381638 134389372 + Ivd protein_coding processed_transcript MGP_NODShiLtJ_T0056519.1 MGP_NODShiLtJ_G0026141.1 mouse_genomes_project 2 134382367 134385023 + Ivd protein_coding processed_transcript MGP_NODShiLtJ_T0056402.1 MGP_NODShiLtJ_G0026118.1 mouse_genomes_project 2 129033865 129109680 - MGP_NODShiLtJ_P0056402 Aqr protein_coding protein_coding MGP_NODShiLtJ_T0056403.1 MGP_NODShiLtJ_G0026118.1 mouse_genomes_project 2 129037854 129109618 - MGP_NODShiLtJ_P0056403 Aqr protein_coding protein_coding MGP_NODShiLtJ_T0056404.1 MGP_NODShiLtJ_G0026118.1 mouse_genomes_project 2 129044809 129051935 - Aqr protein_coding processed_transcript MGP_NODShiLtJ_T0056405.1 MGP_NODShiLtJ_G0026118.1 mouse_genomes_project 2 129067200 129075347 - Aqr protein_coding processed_transcript MGP_NODShiLtJ_T0056406.1 MGP_NODShiLtJ_G0026118.1 mouse_genomes_project 2 129067581 129109587 - Aqr protein_coding processed_transcript MGP_NODShiLtJ_T0056407.1 MGP_NODShiLtJ_G0026118.1 mouse_genomes_project 2 129086921 129109679 - Aqr protein_coding processed_transcript MGP_NODShiLtJ_T0056408.1 MGP_NODShiLtJ_G0026118.1 mouse_genomes_project 2 129092783 129109679 - Aqr protein_coding processed_transcript MGP_NODShiLtJ_T0056409.1 MGP_NODShiLtJ_G0026118.1 mouse_genomes_project 2 129104200 129109757 - Aqr protein_coding processed_transcript MGP_NODShiLtJ_T0010275.1 MGP_NODShiLtJ_G0008408.1 mouse_genomes_project 2 18850446 18850522 + Gm44457 miRNA miRNA MGP_NODShiLtJ_T0056261.1 MGP_NODShiLtJ_G0026057.1 mouse_genomes_project 2 120183541 120371175 + MGP_NODShiLtJ_P0056261 Mpped2 protein_coding protein_coding MGP_NODShiLtJ_T0056262.1 MGP_NODShiLtJ_G0026057.1 mouse_genomes_project 2 120185493 120240797 + MGP_NODShiLtJ_P0056262 Mpped2 protein_coding protein_coding MGP_NODShiLtJ_T0056263.1 MGP_NODShiLtJ_G0026057.1 mouse_genomes_project 2 120185874 120370025 + MGP_NODShiLtJ_P0056263 Mpped2 protein_coding protein_coding MGP_NODShiLtJ_T0056264.1 MGP_NODShiLtJ_G0026057.1 mouse_genomes_project 2 120185896 120279846 + Mpped2 protein_coding processed_transcript MGP_NODShiLtJ_T0056265.1 MGP_NODShiLtJ_G0026057.1 mouse_genomes_project 2 120186127 120369854 + MGP_NODShiLtJ_P0056265 Mpped2 protein_coding protein_coding MGP_NODShiLtJ_T0056266.1 MGP_NODShiLtJ_G0026057.1 mouse_genomes_project 2 120226503 120279965 + Mpped2 protein_coding processed_transcript MGP_NODShiLtJ_T0101100.1 MGP_NODShiLtJ_G0039448.1 mouse_genomes_project 2 82168851 82169457 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0013487.1 MGP_NODShiLtJ_G0011595.1 mouse_genomes_project 2 81912698 81913157 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003833.1 MGP_NODShiLtJ_G0003425.1 mouse_genomes_project 2 1637517 1638781 - Gm13179 antisense antisense MGP_NODShiLtJ_T0003834.1 MGP_NODShiLtJ_G0003425.1 mouse_genomes_project 2 1637821 1638781 - Gm13179 antisense antisense MGP_NODShiLtJ_T0010343.1 MGP_NODShiLtJ_G0008476.1 mouse_genomes_project 2 130832700 130832789 + Mir1951 miRNA miRNA MGP_NODShiLtJ_T0055735.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102044233 - MGP_NODShiLtJ_P0055735 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055736.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102044233 - MGP_NODShiLtJ_P0055736 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055737.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102044233 - MGP_NODShiLtJ_P0055737 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055738.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102043311 - MGP_NODShiLtJ_P0055738 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055739.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102043271 - MGP_NODShiLtJ_P0055739 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055740.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102039729 - MGP_NODShiLtJ_P0055740 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055741.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102044233 - MGP_NODShiLtJ_P0055741 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055742.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102039725 - MGP_NODShiLtJ_P0055742 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055743.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102039734 - MGP_NODShiLtJ_P0055743 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055744.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102044233 - MGP_NODShiLtJ_P0055744 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055745.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102043312 - MGP_NODShiLtJ_P0055745 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055746.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993305 102039723 - MGP_NODShiLtJ_P0055746 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055747.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993306 102044233 - Madd protein_coding processed_transcript MGP_NODShiLtJ_T0055748.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993306 102044233 - Madd protein_coding processed_transcript MGP_NODShiLtJ_T0055749.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993306 102044233 - Madd protein_coding processed_transcript MGP_NODShiLtJ_T0055750.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993306 102044233 - Madd protein_coding processed_transcript MGP_NODShiLtJ_T0055751.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993306 102044233 - Madd protein_coding processed_transcript MGP_NODShiLtJ_T0055752.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101993306 102044233 - MGP_NODShiLtJ_P0055752 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055753.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 101994281 101995188 - Madd protein_coding retained_intron MGP_NODShiLtJ_T0055754.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102000501 102014442 - Madd protein_coding retained_intron MGP_NODShiLtJ_T0055755.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102000730 102010621 - Madd protein_coding retained_intron MGP_NODShiLtJ_T0055756.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102010276 102014286 - Madd protein_coding retained_intron MGP_NODShiLtJ_T0055757.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102015048 102019826 - Madd protein_coding retained_intron MGP_NODShiLtJ_T0055758.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102020514 102043449 - Madd protein_coding retained_intron MGP_NODShiLtJ_T0055759.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102020861 102043470 - MGP_NODShiLtJ_P0055759 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055760.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102027275 102036305 - MGP_NODShiLtJ_P0055760 Madd protein_coding protein_coding MGP_NODShiLtJ_T0055761.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102038047 102044252 - Madd protein_coding retained_intron MGP_NODShiLtJ_T0055762.1 MGP_NODShiLtJ_G0025967.1 mouse_genomes_project 2 102038856 102043462 - Madd protein_coding processed_transcript MGP_NODShiLtJ_T0098013.1 MGP_NODShiLtJ_G0036425.1 mouse_genomes_project 2 136309760 136309885 - n-R5s205 rRNA rRNA MGP_NODShiLtJ_T0056774.1 MGP_NODShiLtJ_G0026191.1 mouse_genomes_project 2 136535275 136669046 - MGP_NODShiLtJ_P0056774 Ubr1 protein_coding protein_coding MGP_NODShiLtJ_T0056775.1 MGP_NODShiLtJ_G0026191.1 mouse_genomes_project 2 136537579 136549713 - Ubr1 protein_coding processed_transcript MGP_NODShiLtJ_T0056776.1 MGP_NODShiLtJ_G0026191.1 mouse_genomes_project 2 136551236 136568336 - Ubr1 protein_coding processed_transcript MGP_NODShiLtJ_T0056777.1 MGP_NODShiLtJ_G0026191.1 mouse_genomes_project 2 136579993 136600812 - Ubr1 protein_coding processed_transcript MGP_NODShiLtJ_T0056778.1 MGP_NODShiLtJ_G0026191.1 mouse_genomes_project 2 136610290 136622986 - Ubr1 protein_coding processed_transcript MGP_NODShiLtJ_T0056779.1 MGP_NODShiLtJ_G0026191.1 mouse_genomes_project 2 136638045 136668944 - Ubr1 protein_coding retained_intron MGP_NODShiLtJ_T0056780.1 MGP_NODShiLtJ_G0026191.1 mouse_genomes_project 2 136660586 136669023 - Ubr1 protein_coding retained_intron MGP_NODShiLtJ_T0058953.1 MGP_NODShiLtJ_G0026705.1 mouse_genomes_project 2 185458544 185473703 - MGP_NODShiLtJ_P0058953 1700025C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0056005.1 MGP_NODShiLtJ_G0026006.1 mouse_genomes_project 2 105070401 105106668 - MGP_NODShiLtJ_P0056005 Gm27027 protein_coding protein_coding MGP_NODShiLtJ_T0001037.1 MGP_NODShiLtJ_G0000963.1 mouse_genomes_project 2 32747234 32751396 + TEC TEC MGP_NODShiLtJ_T0054756.1 MGP_NODShiLtJ_G0025619.1 mouse_genomes_project 2 72485232 72566442 - MGP_NODShiLtJ_P0054756 Ttc21b protein_coding protein_coding MGP_NODShiLtJ_T0054757.1 MGP_NODShiLtJ_G0025619.1 mouse_genomes_project 2 72520730 72544147 - Ttc21b protein_coding retained_intron MGP_NODShiLtJ_T0054758.1 MGP_NODShiLtJ_G0025619.1 mouse_genomes_project 2 72539000 72559327 - Ttc21b protein_coding retained_intron MGP_NODShiLtJ_T0099133.1 MGP_NODShiLtJ_G0037527.1 mouse_genomes_project 2 149482915 149483018 + Gm22245 snRNA snRNA MGP_NODShiLtJ_T0017596.1 MGP_NODShiLtJ_G0015269.1 mouse_genomes_project 2 23997992 24049490 + Gm13415 processed_transcript antisense MGP_NODShiLtJ_T0017597.1 MGP_NODShiLtJ_G0015269.1 mouse_genomes_project 2 24000409 24022787 + Gm13415 processed_transcript antisense MGP_NODShiLtJ_T0017598.1 MGP_NODShiLtJ_G0015269.1 mouse_genomes_project 2 24000423 24002839 + Gm13415 processed_transcript retained_intron MGP_NODShiLtJ_T0101796.1 MGP_NODShiLtJ_G0039964.1 mouse_genomes_project 2 40334786 40339856 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013364.1 MGP_NODShiLtJ_G0011472.1 mouse_genomes_project 2 32502039 32502357 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057630.1 MGP_NODShiLtJ_G0026380.1 mouse_genomes_project 2 155624488 155910190 + Btbd3 protein_coding processed_transcript MGP_NODShiLtJ_T0057631.1 MGP_NODShiLtJ_G0026380.1 mouse_genomes_project 2 155624496 155955647 + Btbd3 protein_coding processed_transcript MGP_NODShiLtJ_T0057632.1 MGP_NODShiLtJ_G0026380.1 mouse_genomes_project 2 155647721 155656239 + MGP_NODShiLtJ_P0057632 Btbd3 protein_coding protein_coding MGP_NODShiLtJ_T0056591.1 MGP_NODShiLtJ_G0026163.1 mouse_genomes_project 2 135188894 135222352 + MGP_NODShiLtJ_P0056591 Nusap1 protein_coding protein_coding MGP_NODShiLtJ_T0056592.1 MGP_NODShiLtJ_G0026163.1 mouse_genomes_project 2 135189290 135207782 + Nusap1 protein_coding processed_transcript MGP_NODShiLtJ_T0056593.1 MGP_NODShiLtJ_G0026163.1 mouse_genomes_project 2 135189313 135224138 + MGP_NODShiLtJ_P0056593 Nusap1 protein_coding protein_coding MGP_NODShiLtJ_T0056594.1 MGP_NODShiLtJ_G0026163.1 mouse_genomes_project 2 135189325 135201550 + Nusap1 protein_coding processed_transcript MGP_NODShiLtJ_T0010279.1 MGP_NODShiLtJ_G0008412.1 mouse_genomes_project 2 24686475 24686542 - Gm24328 miRNA miRNA MGP_NODShiLtJ_T0054476.1 MGP_NODShiLtJ_G0025572.1 mouse_genomes_project 2 56617676 56670548 - MGP_NODShiLtJ_P0054476 Stam2 protein_coding protein_coding MGP_NODShiLtJ_T0054477.1 MGP_NODShiLtJ_G0025572.1 mouse_genomes_project 2 56628302 56670629 - MGP_NODShiLtJ_P0054477 Stam2 protein_coding protein_coding MGP_NODShiLtJ_T0054478.1 MGP_NODShiLtJ_G0025572.1 mouse_genomes_project 2 56638199 56670528 - Stam2 protein_coding retained_intron MGP_NODShiLtJ_T0054479.1 MGP_NODShiLtJ_G0025572.1 mouse_genomes_project 2 56638481 56670538 - MGP_NODShiLtJ_P0054479 Stam2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054480.1 MGP_NODShiLtJ_G0025572.1 mouse_genomes_project 2 56646614 56670504 - MGP_NODShiLtJ_P0054480 Stam2 protein_coding protein_coding MGP_NODShiLtJ_T0010307.1 MGP_NODShiLtJ_G0008440.1 mouse_genomes_project 2 39715639 39715715 + Mir181a-2 miRNA miRNA MGP_NODShiLtJ_T0007216.1 MGP_NODShiLtJ_G0005910.1 mouse_genomes_project 2 114949870 114963698 + Gm13905 lincRNA lincRNA MGP_NODShiLtJ_T0013329.1 MGP_NODShiLtJ_G0011437.1 mouse_genomes_project 2 17483068 17483384 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010393.1 MGP_NODShiLtJ_G0008526.1 mouse_genomes_project 2 203207869 203207938 - Mir7006 miRNA miRNA MGP_NODShiLtJ_T0055641.1 MGP_NODShiLtJ_G0025951.1 mouse_genomes_project 2 100972350 100973337 - MGP_NODShiLtJ_P0055641 Olfr142 protein_coding protein_coding MGP_NODShiLtJ_T0055003.1 MGP_NODShiLtJ_G0025667.1 mouse_genomes_project 2 79536409 79548860 + MGP_NODShiLtJ_P0055003 Cdca7 protein_coding protein_coding MGP_NODShiLtJ_T0055004.1 MGP_NODShiLtJ_G0025667.1 mouse_genomes_project 2 79536503 79542748 + MGP_NODShiLtJ_P0055004 Cdca7 protein_coding protein_coding MGP_NODShiLtJ_T0055005.1 MGP_NODShiLtJ_G0025667.1 mouse_genomes_project 2 79536640 79542111 + Cdca7 protein_coding processed_transcript MGP_NODShiLtJ_T0055006.1 MGP_NODShiLtJ_G0025667.1 mouse_genomes_project 2 79543814 79544994 + Cdca7 protein_coding processed_transcript MGP_NODShiLtJ_T0055007.1 MGP_NODShiLtJ_G0025667.1 mouse_genomes_project 2 79545357 79548169 + Cdca7 protein_coding processed_transcript MGP_NODShiLtJ_T0056073.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115772699 115908176 + MGP_NODShiLtJ_P0056073 Slc1a2 protein_coding protein_coding MGP_NODShiLtJ_T0056074.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115773263 115850576 + Slc1a2 protein_coding processed_transcript MGP_NODShiLtJ_T0056075.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115773298 115850573 + Slc1a2 protein_coding processed_transcript MGP_NODShiLtJ_T0056076.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115773321 115893954 + MGP_NODShiLtJ_P0056076 Slc1a2 protein_coding protein_coding MGP_NODShiLtJ_T0056077.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115789258 115850573 + Slc1a2 protein_coding processed_transcript MGP_NODShiLtJ_T0056078.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115820956 115854490 + MGP_NODShiLtJ_P0056078 Slc1a2 protein_coding protein_coding MGP_NODShiLtJ_T0056079.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115821038 115899155 + MGP_NODShiLtJ_P0056079 Slc1a2 protein_coding protein_coding MGP_NODShiLtJ_T0056080.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115821038 115893963 + MGP_NODShiLtJ_P0056080 Slc1a2 protein_coding protein_coding MGP_NODShiLtJ_T0056081.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115833595 115850569 + Slc1a2 protein_coding processed_transcript MGP_NODShiLtJ_T0056082.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115870501 115893441 + MGP_NODShiLtJ_P0056082 Slc1a2 protein_coding protein_coding MGP_NODShiLtJ_T0056083.1 MGP_NODShiLtJ_G0026022.1 mouse_genomes_project 2 115875770 115898969 + MGP_NODShiLtJ_P0056083 Slc1a2 protein_coding protein_coding MGP_NODShiLtJ_T0100375.1 MGP_NODShiLtJ_G0038769.1 mouse_genomes_project 2 79037567 79037694 - Gm26408 snoRNA snoRNA MGP_NODShiLtJ_T0007125.1 MGP_NODShiLtJ_G0005835.1 mouse_genomes_project 2 35683492 35685213 + Gm13605 lincRNA lincRNA MGP_NODShiLtJ_T0101835.1 MGP_NODShiLtJ_G0040003.1 mouse_genomes_project 2 101226346 101239533 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0057619.1 MGP_NODShiLtJ_G0026377.1 mouse_genomes_project 2 154096820 154114302 - MGP_NODShiLtJ_P0057619 Mkks protein_coding protein_coding MGP_NODShiLtJ_T0057620.1 MGP_NODShiLtJ_G0026377.1 mouse_genomes_project 2 154096820 154114309 - MGP_NODShiLtJ_P0057620 Mkks protein_coding protein_coding MGP_NODShiLtJ_T0057621.1 MGP_NODShiLtJ_G0026377.1 mouse_genomes_project 2 154103680 154114074 - MGP_NODShiLtJ_P0057621 Mkks protein_coding protein_coding MGP_NODShiLtJ_T0011418.1 MGP_NODShiLtJ_G0009551.1 mouse_genomes_project 2 202391478 202391596 + Gm22842 misc_RNA misc_RNA MGP_NODShiLtJ_T0052986.1 MGP_NODShiLtJ_G0025316.1 mouse_genomes_project 2 25927907 25935985 - MGP_NODShiLtJ_P0052986 Lhx3 protein_coding protein_coding MGP_NODShiLtJ_T0052987.1 MGP_NODShiLtJ_G0025316.1 mouse_genomes_project 2 25927911 25930562 - Lhx3 protein_coding retained_intron MGP_NODShiLtJ_T0052988.1 MGP_NODShiLtJ_G0025316.1 mouse_genomes_project 2 25927911 25934271 - MGP_NODShiLtJ_P0052988 Lhx3 protein_coding protein_coding MGP_NODShiLtJ_T0052989.1 MGP_NODShiLtJ_G0025316.1 mouse_genomes_project 2 25930171 25931137 - Lhx3 protein_coding retained_intron MGP_NODShiLtJ_T0054812.1 MGP_NODShiLtJ_G0025631.1 mouse_genomes_project 2 75903988 75920461 + G6pc2 protein_coding processed_transcript MGP_NODShiLtJ_T0054813.1 MGP_NODShiLtJ_G0025631.1 mouse_genomes_project 2 75913738 75921619 + MGP_NODShiLtJ_P0054813 G6pc2 protein_coding protein_coding MGP_NODShiLtJ_T0054814.1 MGP_NODShiLtJ_G0025631.1 mouse_genomes_project 2 75913765 75921619 + MGP_NODShiLtJ_P0054814 G6pc2 protein_coding protein_coding MGP_NODShiLtJ_T0054815.1 MGP_NODShiLtJ_G0025631.1 mouse_genomes_project 2 75913795 75920613 + G6pc2 protein_coding processed_transcript MGP_NODShiLtJ_T0056918.1 MGP_NODShiLtJ_G0026214.1 mouse_genomes_project 2 137200683 137280822 + Wdr76 protein_coding retained_intron MGP_NODShiLtJ_T0056919.1 MGP_NODShiLtJ_G0026214.1 mouse_genomes_project 2 137250222 137290649 + MGP_NODShiLtJ_P0056919 Wdr76 protein_coding protein_coding MGP_NODShiLtJ_T0056920.1 MGP_NODShiLtJ_G0026214.1 mouse_genomes_project 2 137250247 137292487 + MGP_NODShiLtJ_P0056920 Wdr76 protein_coding protein_coding MGP_NODShiLtJ_T0054832.1 MGP_NODShiLtJ_G0025636.1 mouse_genomes_project 2 76450180 76465035 + MGP_NODShiLtJ_P0054832 Klhl41 protein_coding protein_coding MGP_NODShiLtJ_T0007131.1 MGP_NODShiLtJ_G0005839.1 mouse_genomes_project 2 39254985 39293042 + Gm13589 lincRNA lincRNA MGP_NODShiLtJ_T0007092.1 MGP_NODShiLtJ_G0005811.1 mouse_genomes_project 2 18608469 18617926 - Gm13346 lincRNA lincRNA MGP_NODShiLtJ_T0013426.1 MGP_NODShiLtJ_G0011534.1 mouse_genomes_project 2 58377937 58378754 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055385.1 MGP_NODShiLtJ_G0025750.1 mouse_genomes_project 2 93691165 93705886 - MGP_NODShiLtJ_P0055385 Rtn4rl2 protein_coding protein_coding MGP_NODShiLtJ_T0055386.1 MGP_NODShiLtJ_G0025750.1 mouse_genomes_project 2 93691187 93705868 - MGP_NODShiLtJ_P0055386 Rtn4rl2 protein_coding protein_coding MGP_NODShiLtJ_T0055387.1 MGP_NODShiLtJ_G0025750.1 mouse_genomes_project 2 93699757 93705652 - Rtn4rl2 protein_coding processed_transcript MGP_NODShiLtJ_T0052263.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9686246 9687325 - Fbxo18 protein_coding processed_transcript MGP_NODShiLtJ_T0052264.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9686248 9732680 - MGP_NODShiLtJ_P0052264 Fbxo18 protein_coding protein_coding MGP_NODShiLtJ_T0052265.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9687340 9692871 - Fbxo18 protein_coding retained_intron MGP_NODShiLtJ_T0052266.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9691491 9732605 - Fbxo18 protein_coding retained_intron MGP_NODShiLtJ_T0052267.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9692078 9707655 - MGP_NODShiLtJ_P0052267 Fbxo18 protein_coding protein_coding MGP_NODShiLtJ_T0052268.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9693096 9695408 - Fbxo18 protein_coding retained_intron MGP_NODShiLtJ_T0052269.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9695317 9708572 - Fbxo18 protein_coding retained_intron MGP_NODShiLtJ_T0052270.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9713030 9732648 - Fbxo18 protein_coding processed_transcript MGP_NODShiLtJ_T0052271.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9714323 9732646 - Fbxo18 protein_coding processed_transcript MGP_NODShiLtJ_T0052272.1 MGP_NODShiLtJ_G0025186.1 mouse_genomes_project 2 9717593 9732605 - Fbxo18 protein_coding processed_transcript MGP_NODShiLtJ_T0053700.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32153004 32177580 + MGP_NODShiLtJ_P0053700 Aif1l protein_coding protein_coding MGP_NODShiLtJ_T0053701.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32153139 32173890 + MGP_NODShiLtJ_P0053701 Aif1l protein_coding protein_coding MGP_NODShiLtJ_T0053702.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32153199 32175370 + MGP_NODShiLtJ_P0053702 Aif1l protein_coding protein_coding MGP_NODShiLtJ_T0053703.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32153328 32173893 + Aif1l protein_coding retained_intron MGP_NODShiLtJ_T0053704.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32153382 32175476 + Aif1l protein_coding retained_intron MGP_NODShiLtJ_T0053705.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32163221 32175162 + Aif1l protein_coding processed_transcript MGP_NODShiLtJ_T0053706.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32164202 32173889 + Aif1l protein_coding processed_transcript MGP_NODShiLtJ_T0053707.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32164792 32175086 + Aif1l protein_coding retained_intron MGP_NODShiLtJ_T0053708.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32167453 32175133 + Aif1l protein_coding processed_transcript MGP_NODShiLtJ_T0053709.1 MGP_NODShiLtJ_G0025431.1 mouse_genomes_project 2 32173462 32175293 + Aif1l protein_coding retained_intron MGP_NODShiLtJ_T0001034.1 MGP_NODShiLtJ_G0000960.1 mouse_genomes_project 2 23765559 23767343 + TEC TEC MGP_NODShiLtJ_T0004124.1 MGP_NODShiLtJ_G0003639.1 mouse_genomes_project 2 193498944 193514202 + Gm14273 antisense antisense MGP_NODShiLtJ_T0056733.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136228574 136268110 + MGP_NODShiLtJ_P0056733 Snap23 protein_coding protein_coding MGP_NODShiLtJ_T0056734.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136228594 136268110 + MGP_NODShiLtJ_P0056734 Snap23 protein_coding protein_coding MGP_NODShiLtJ_T0056735.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136228600 136268110 + MGP_NODShiLtJ_P0056735 Snap23 protein_coding protein_coding MGP_NODShiLtJ_T0056736.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136228624 136262695 + MGP_NODShiLtJ_P0056736 Snap23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056737.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136228626 136249612 + Snap23 protein_coding retained_intron MGP_NODShiLtJ_T0056738.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136228626 136250933 + MGP_NODShiLtJ_P0056738 Snap23 protein_coding protein_coding MGP_NODShiLtJ_T0056739.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136228641 136262608 + MGP_NODShiLtJ_P0056739 Snap23 protein_coding protein_coding MGP_NODShiLtJ_T0056740.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136250906 136261327 + Snap23 protein_coding retained_intron MGP_NODShiLtJ_T0056741.1 MGP_NODShiLtJ_G0026185.1 mouse_genomes_project 2 136256437 136262690 + Snap23 protein_coding processed_transcript MGP_NODShiLtJ_T0013307.1 MGP_NODShiLtJ_G0011415.1 mouse_genomes_project 2 8987873 8989327 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003932.1 MGP_NODShiLtJ_G0003501.1 mouse_genomes_project 2 71738622 71741947 + Gm13595 antisense antisense MGP_NODShiLtJ_T0057255.1 MGP_NODShiLtJ_G0026299.1 mouse_genomes_project 2 145544583 145575563 + MGP_NODShiLtJ_P0057255 Ttl protein_coding protein_coding MGP_NODShiLtJ_T0057256.1 MGP_NODShiLtJ_G0026299.1 mouse_genomes_project 2 145544626 145546747 + Ttl protein_coding processed_transcript MGP_NODShiLtJ_T0057257.1 MGP_NODShiLtJ_G0026299.1 mouse_genomes_project 2 145554703 145569018 + MGP_NODShiLtJ_P0057257 Ttl protein_coding protein_coding MGP_NODShiLtJ_T0013309.1 MGP_NODShiLtJ_G0011417.1 mouse_genomes_project 2 9539757 9541021 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100426.1 MGP_NODShiLtJ_G0038820.1 mouse_genomes_project 2 187708951 187709040 + Gm23201 snoRNA snoRNA MGP_NODShiLtJ_T0055563.1 MGP_NODShiLtJ_G0025886.1 mouse_genomes_project 2 98792115 98793036 + MGP_NODShiLtJ_P0055563 Olfr1189 protein_coding protein_coding MGP_NODShiLtJ_T0054948.1 MGP_NODShiLtJ_G0025657.1 mouse_genomes_project 2 78344610 78404817 + MGP_NODShiLtJ_P0054948 Hat1 protein_coding protein_coding MGP_NODShiLtJ_T0054949.1 MGP_NODShiLtJ_G0025657.1 mouse_genomes_project 2 78344912 78404817 + MGP_NODShiLtJ_P0054949 Hat1 protein_coding protein_coding MGP_NODShiLtJ_T0054950.1 MGP_NODShiLtJ_G0025657.1 mouse_genomes_project 2 78362118 78369911 + Hat1 protein_coding processed_transcript MGP_NODShiLtJ_T0054954.1 MGP_NODShiLtJ_G0025657.1 mouse_genomes_project 2 78381997 78402015 + Hat1 protein_coding processed_transcript MGP_NODShiLtJ_T0053042.1 MGP_NODShiLtJ_G0025325.1 mouse_genomes_project 2 26125718 26133502 + MGP_NODShiLtJ_P0053042 Pmpca protein_coding protein_coding MGP_NODShiLtJ_T0053043.1 MGP_NODShiLtJ_G0025325.1 mouse_genomes_project 2 26125727 26130321 + MGP_NODShiLtJ_P0053043 Pmpca protein_coding protein_coding MGP_NODShiLtJ_T0053044.1 MGP_NODShiLtJ_G0025325.1 mouse_genomes_project 2 26125733 26126675 + Pmpca protein_coding processed_transcript MGP_NODShiLtJ_T0053045.1 MGP_NODShiLtJ_G0025325.1 mouse_genomes_project 2 26125733 26126582 + Pmpca protein_coding processed_transcript MGP_NODShiLtJ_T0053046.1 MGP_NODShiLtJ_G0025325.1 mouse_genomes_project 2 26125735 26128346 + Pmpca protein_coding processed_transcript MGP_NODShiLtJ_T0053047.1 MGP_NODShiLtJ_G0025325.1 mouse_genomes_project 2 26127306 26128778 + Pmpca protein_coding processed_transcript MGP_NODShiLtJ_T0053466.1 MGP_NODShiLtJ_G0025396.1 mouse_genomes_project 2 30233346 30253986 - MGP_NODShiLtJ_P0053466 Kyat1 protein_coding protein_coding MGP_NODShiLtJ_T0053467.1 MGP_NODShiLtJ_G0025396.1 mouse_genomes_project 2 30233348 30253955 - Kyat1 protein_coding processed_transcript MGP_NODShiLtJ_T0053468.1 MGP_NODShiLtJ_G0025396.1 mouse_genomes_project 2 30233348 30253914 - MGP_NODShiLtJ_P0053468 Kyat1 protein_coding protein_coding MGP_NODShiLtJ_T0053469.1 MGP_NODShiLtJ_G0025396.1 mouse_genomes_project 2 30233353 30246436 - MGP_NODShiLtJ_P0053469 Kyat1 protein_coding protein_coding MGP_NODShiLtJ_T0053470.1 MGP_NODShiLtJ_G0025396.1 mouse_genomes_project 2 30233353 30253940 - MGP_NODShiLtJ_P0053470 Kyat1 protein_coding protein_coding MGP_NODShiLtJ_T0053471.1 MGP_NODShiLtJ_G0025396.1 mouse_genomes_project 2 30233490 30242331 - MGP_NODShiLtJ_P0053471 Kyat1 protein_coding protein_coding MGP_NODShiLtJ_T0053472.1 MGP_NODShiLtJ_G0025396.1 mouse_genomes_project 2 30233490 30242331 - MGP_NODShiLtJ_P0053472 Kyat1 protein_coding protein_coding MGP_NODShiLtJ_T0053473.1 MGP_NODShiLtJ_G0025396.1 mouse_genomes_project 2 30239344 30253928 - Kyat1 protein_coding processed_transcript MGP_NODShiLtJ_T0013639.1 MGP_NODShiLtJ_G0011747.1 mouse_genomes_project 2 145423703 145424182 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007195.1 MGP_NODShiLtJ_G0005893.1 mouse_genomes_project 2 91668991 91700761 - Gm28675 lincRNA lincRNA MGP_NODShiLtJ_T0013399.1 MGP_NODShiLtJ_G0011507.1 mouse_genomes_project 2 47259710 47262397 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055467.1 MGP_NODShiLtJ_G0025802.1 mouse_genomes_project 2 95642691 95643574 - MGP_NODShiLtJ_P0055467 protein_coding protein_coding MGP_NODShiLtJ_T0055250.1 MGP_NODShiLtJ_G0025720.1 mouse_genomes_project 2 88148704 88158044 + Dnajc10 protein_coding processed_transcript MGP_NODShiLtJ_T0055251.1 MGP_NODShiLtJ_G0025720.1 mouse_genomes_project 2 88148704 88187441 + MGP_NODShiLtJ_P0055251 Dnajc10 protein_coding protein_coding MGP_NODShiLtJ_T0055252.1 MGP_NODShiLtJ_G0025720.1 mouse_genomes_project 2 88164533 88167068 + Dnajc10 protein_coding processed_transcript MGP_NODShiLtJ_T0055253.1 MGP_NODShiLtJ_G0025720.1 mouse_genomes_project 2 88166967 88174242 + Dnajc10 protein_coding processed_transcript MGP_NODShiLtJ_T0055254.1 MGP_NODShiLtJ_G0025720.1 mouse_genomes_project 2 88181052 88184343 + Dnajc10 protein_coding processed_transcript MGP_NODShiLtJ_T0007183.1 MGP_NODShiLtJ_G0005883.1 mouse_genomes_project 2 82471291 82487664 - Gm13652 lincRNA lincRNA MGP_NODShiLtJ_T0058177.1 MGP_NODShiLtJ_G0026539.1 mouse_genomes_project 2 173978035 173988376 - MGP_NODShiLtJ_P0058177 E2f1 protein_coding protein_coding MGP_NODShiLtJ_T0058178.1 MGP_NODShiLtJ_G0026539.1 mouse_genomes_project 2 173978262 173988204 - MGP_NODShiLtJ_P0058178 E2f1 protein_coding protein_coding MGP_NODShiLtJ_T0056272.1 MGP_NODShiLtJ_G0026060.1 mouse_genomes_project 2 120828496 120836348 + MGP_NODShiLtJ_P0056272 Kcna4 protein_coding protein_coding MGP_NODShiLtJ_T0056273.1 MGP_NODShiLtJ_G0026060.1 mouse_genomes_project 2 120829251 120832317 + Kcna4 protein_coding processed_transcript MGP_NODShiLtJ_T0099130.1 MGP_NODShiLtJ_G0037524.1 mouse_genomes_project 2 142972299 142972448 - Gm23753 snRNA snRNA MGP_NODShiLtJ_T0058821.1 MGP_NODShiLtJ_G0026669.1 mouse_genomes_project 2 184720956 184742093 - MGP_NODShiLtJ_P0058821 Sdc4 protein_coding protein_coding MGP_NODShiLtJ_T0058822.1 MGP_NODShiLtJ_G0026669.1 mouse_genomes_project 2 184722610 184742794 - Sdc4 protein_coding processed_transcript MGP_NODShiLtJ_T0013294.1 MGP_NODShiLtJ_G0011402.1 mouse_genomes_project 2 2048153 2049373 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053695.1 MGP_NODShiLtJ_G0025428.1 mouse_genomes_project 2 31994431 32000318 - MGP_NODShiLtJ_P0053695 Qrfp protein_coding protein_coding MGP_NODShiLtJ_T0013314.1 MGP_NODShiLtJ_G0011422.1 mouse_genomes_project 2 12966908 12967899 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013554.1 MGP_NODShiLtJ_G0011662.1 mouse_genomes_project 2 105049510 105050090 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058290.1 MGP_NODShiLtJ_G0026562.1 mouse_genomes_project 2 175293782 175298092 + MGP_NODShiLtJ_P0058290 Procr protein_coding protein_coding MGP_NODShiLtJ_T0058291.1 MGP_NODShiLtJ_G0026562.1 mouse_genomes_project 2 175293788 175296950 + MGP_NODShiLtJ_P0058291 Procr protein_coding protein_coding MGP_NODShiLtJ_T0058292.1 MGP_NODShiLtJ_G0026562.1 mouse_genomes_project 2 175293815 175296417 + Procr protein_coding retained_intron MGP_NODShiLtJ_T0058293.1 MGP_NODShiLtJ_G0026562.1 mouse_genomes_project 2 175294008 175298089 + Procr protein_coding processed_transcript MGP_NODShiLtJ_T0056339.1 MGP_NODShiLtJ_G0026090.1 mouse_genomes_project 2 126629626 126630723 - MGP_NODShiLtJ_P0056339 Olfr1307 protein_coding protein_coding MGP_NODShiLtJ_T0058864.1 MGP_NODShiLtJ_G0026686.1 mouse_genomes_project 2 185055279 185057983 + MGP_NODShiLtJ_P0058864 Spint5 protein_coding protein_coding MGP_NODShiLtJ_T0058865.1 MGP_NODShiLtJ_G0026686.1 mouse_genomes_project 2 185055279 185057983 + MGP_NODShiLtJ_P0058865 Spint5 protein_coding protein_coding MGP_NODShiLtJ_T0057759.1 MGP_NODShiLtJ_G0026412.1 mouse_genomes_project 2 164314850 164329155 + MGP_NODShiLtJ_P0057759 Naa20 protein_coding protein_coding MGP_NODShiLtJ_T0057760.1 MGP_NODShiLtJ_G0026412.1 mouse_genomes_project 2 164314862 164327237 + MGP_NODShiLtJ_P0057760 Naa20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057761.1 MGP_NODShiLtJ_G0026412.1 mouse_genomes_project 2 164314866 164327243 + MGP_NODShiLtJ_P0057761 Naa20 protein_coding protein_coding MGP_NODShiLtJ_T0057762.1 MGP_NODShiLtJ_G0026412.1 mouse_genomes_project 2 164314871 164327317 + MGP_NODShiLtJ_P0057762 Naa20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057763.1 MGP_NODShiLtJ_G0026412.1 mouse_genomes_project 2 164314903 164322075 + MGP_NODShiLtJ_P0057763 Naa20 protein_coding protein_coding MGP_NODShiLtJ_T0057764.1 MGP_NODShiLtJ_G0026412.1 mouse_genomes_project 2 164314906 164323680 + Naa20 protein_coding retained_intron MGP_NODShiLtJ_T0057765.1 MGP_NODShiLtJ_G0026412.1 mouse_genomes_project 2 164314919 164328013 + MGP_NODShiLtJ_P0057765 Naa20 protein_coding protein_coding MGP_NODShiLtJ_T0057766.1 MGP_NODShiLtJ_G0026412.1 mouse_genomes_project 2 164323570 164327420 + Naa20 protein_coding retained_intron MGP_NODShiLtJ_T0053054.1 MGP_NODShiLtJ_G0025327.1 mouse_genomes_project 2 26146845 26185180 - MGP_NODShiLtJ_P0053054 Sec16a protein_coding protein_coding MGP_NODShiLtJ_T0053055.1 MGP_NODShiLtJ_G0025327.1 mouse_genomes_project 2 26146845 26168339 - MGP_NODShiLtJ_P0053055 Sec16a protein_coding protein_coding MGP_NODShiLtJ_T0053056.1 MGP_NODShiLtJ_G0025327.1 mouse_genomes_project 2 26146847 26185182 - MGP_NODShiLtJ_P0053056 Sec16a protein_coding protein_coding MGP_NODShiLtJ_T0053057.1 MGP_NODShiLtJ_G0025327.1 mouse_genomes_project 2 26147703 26151879 - Sec16a protein_coding processed_transcript MGP_NODShiLtJ_T0053058.1 MGP_NODShiLtJ_G0025327.1 mouse_genomes_project 2 26148133 26155057 - Sec16a protein_coding processed_transcript MGP_NODShiLtJ_T0053059.1 MGP_NODShiLtJ_G0025327.1 mouse_genomes_project 2 26153205 26158583 - Sec16a protein_coding processed_transcript MGP_NODShiLtJ_T0053060.1 MGP_NODShiLtJ_G0025327.1 mouse_genomes_project 2 26174801 26179721 - MGP_NODShiLtJ_P0053060 Sec16a protein_coding protein_coding MGP_NODShiLtJ_T0053061.1 MGP_NODShiLtJ_G0025327.1 mouse_genomes_project 2 26181929 26185166 - Sec16a protein_coding processed_transcript MGP_NODShiLtJ_T0100367.1 MGP_NODShiLtJ_G0038761.1 mouse_genomes_project 2 58190372 58190505 + Gm22298 snoRNA snoRNA MGP_NODShiLtJ_T0017763.1 MGP_NODShiLtJ_G0015355.1 mouse_genomes_project 2 179851019 179887800 + 4933416E03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099111.1 MGP_NODShiLtJ_G0037505.1 mouse_genomes_project 2 78417222 78417323 - Gm23166 snRNA snRNA MGP_NODShiLtJ_T0058630.1 MGP_NODShiLtJ_G0026617.1 mouse_genomes_project 2 178395201 178400183 + MGP_NODShiLtJ_P0058630 Slc32a1 protein_coding protein_coding MGP_NODShiLtJ_T0055931.1 MGP_NODShiLtJ_G0025992.1 mouse_genomes_project 2 103397567 103427959 - MGP_NODShiLtJ_P0055931 Cry2 protein_coding protein_coding MGP_NODShiLtJ_T0055932.1 MGP_NODShiLtJ_G0025992.1 mouse_genomes_project 2 103405181 103427952 - MGP_NODShiLtJ_P0055932 Cry2 protein_coding protein_coding MGP_NODShiLtJ_T0055933.1 MGP_NODShiLtJ_G0025992.1 mouse_genomes_project 2 103419075 103427952 - Cry2 protein_coding processed_transcript MGP_NODShiLtJ_T0055934.1 MGP_NODShiLtJ_G0025992.1 mouse_genomes_project 2 103420825 103426310 - Cry2 protein_coding processed_transcript MGP_NODShiLtJ_T0098487.1 MGP_NODShiLtJ_G0036883.1 mouse_genomes_project 2 202544875 202549711 + 9230112E08Rik sense_overlapping sense_overlapping MGP_NODShiLtJ_T0098488.1 MGP_NODShiLtJ_G0036883.1 mouse_genomes_project 2 202545182 202546545 + 9230112E08Rik sense_overlapping sense_overlapping MGP_NODShiLtJ_T0010391.1 MGP_NODShiLtJ_G0008524.1 mouse_genomes_project 2 201916295 201916399 + Mir133a-2 miRNA miRNA MGP_NODShiLtJ_T0003852.1 MGP_NODShiLtJ_G0003440.1 mouse_genomes_project 2 18340651 18343532 - Gm13344 antisense antisense MGP_NODShiLtJ_T0059251.1 MGP_NODShiLtJ_G0026769.1 mouse_genomes_project 2 194247440 194264112 + MGP_NODShiLtJ_P0059251 Rae1 protein_coding protein_coding MGP_NODShiLtJ_T0059252.1 MGP_NODShiLtJ_G0026769.1 mouse_genomes_project 2 194247447 194257808 + MGP_NODShiLtJ_P0059252 Rae1 protein_coding protein_coding MGP_NODShiLtJ_T0059253.1 MGP_NODShiLtJ_G0026769.1 mouse_genomes_project 2 194254991 194257807 + Rae1 protein_coding retained_intron MGP_NODShiLtJ_T0059254.1 MGP_NODShiLtJ_G0026769.1 mouse_genomes_project 2 194260023 194261182 + Rae1 protein_coding retained_intron MGP_NODShiLtJ_T0059255.1 MGP_NODShiLtJ_G0026769.1 mouse_genomes_project 2 194260821 194263800 + Rae1 protein_coding retained_intron MGP_NODShiLtJ_T0003862.1 MGP_NODShiLtJ_G0003450.1 mouse_genomes_project 2 25285354 25310549 + Fcnaos antisense antisense MGP_NODShiLtJ_T0003863.1 MGP_NODShiLtJ_G0003450.1 mouse_genomes_project 2 25293409 25310549 + Fcnaos antisense antisense MGP_NODShiLtJ_T0003864.1 MGP_NODShiLtJ_G0003450.1 mouse_genomes_project 2 25306440 25310550 + Fcnaos antisense antisense MGP_NODShiLtJ_T0003865.1 MGP_NODShiLtJ_G0003450.1 mouse_genomes_project 2 25309434 25310552 + Fcnaos antisense antisense MGP_NODShiLtJ_T0055617.1 MGP_NODShiLtJ_G0025934.1 mouse_genomes_project 2 100330184 100330901 - MGP_NODShiLtJ_P0055617 protein_coding protein_coding MGP_NODShiLtJ_T0013570.1 MGP_NODShiLtJ_G0011678.1 mouse_genomes_project 2 114609773 114611613 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007249.1 MGP_NODShiLtJ_G0005935.1 mouse_genomes_project 2 132791308 132794658 - Gm13982 lincRNA lincRNA MGP_NODShiLtJ_T0055920.1 MGP_NODShiLtJ_G0025989.1 mouse_genomes_project 2 103365053 103371594 + Pex16 protein_coding processed_transcript MGP_NODShiLtJ_T0055921.1 MGP_NODShiLtJ_G0025989.1 mouse_genomes_project 2 103365683 103371595 + MGP_NODShiLtJ_P0055921 Pex16 protein_coding protein_coding MGP_NODShiLtJ_T0055922.1 MGP_NODShiLtJ_G0025989.1 mouse_genomes_project 2 103365870 103369699 + Pex16 protein_coding processed_transcript MGP_NODShiLtJ_T0055923.1 MGP_NODShiLtJ_G0025989.1 mouse_genomes_project 2 103365936 103367081 + Pex16 protein_coding processed_transcript MGP_NODShiLtJ_T0059508.1 MGP_NODShiLtJ_G0026827.1 mouse_genomes_project 2 202713759 202723737 - MGP_NODShiLtJ_P0059508 Eef1a2 protein_coding protein_coding MGP_NODShiLtJ_T0013559.1 MGP_NODShiLtJ_G0011667.1 mouse_genomes_project 2 107573747 107573907 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053563.1 MGP_NODShiLtJ_G0025409.1 mouse_genomes_project 2 30657593 30672668 + MGP_NODShiLtJ_P0053563 Cstad protein_coding protein_coding MGP_NODShiLtJ_T0053564.1 MGP_NODShiLtJ_G0025409.1 mouse_genomes_project 2 30668863 30671942 + Cstad protein_coding processed_transcript MGP_NODShiLtJ_T0057622.1 MGP_NODShiLtJ_G0026378.1 mouse_genomes_project 2 154114137 154309819 + MGP_NODShiLtJ_P0057622 Slx4ip protein_coding protein_coding MGP_NODShiLtJ_T0057623.1 MGP_NODShiLtJ_G0026378.1 mouse_genomes_project 2 154114420 154239371 + MGP_NODShiLtJ_P0057623 Slx4ip protein_coding protein_coding MGP_NODShiLtJ_T0057624.1 MGP_NODShiLtJ_G0026378.1 mouse_genomes_project 2 154114527 154313042 + Slx4ip protein_coding processed_transcript MGP_NODShiLtJ_T0057625.1 MGP_NODShiLtJ_G0026378.1 mouse_genomes_project 2 154115085 154307599 + Slx4ip protein_coding processed_transcript MGP_NODShiLtJ_T0057626.1 MGP_NODShiLtJ_G0026378.1 mouse_genomes_project 2 154115085 154313042 + MGP_NODShiLtJ_P0057626 Slx4ip protein_coding protein_coding MGP_NODShiLtJ_T0057627.1 MGP_NODShiLtJ_G0026378.1 mouse_genomes_project 2 154129170 154309948 + MGP_NODShiLtJ_P0057627 Slx4ip protein_coding protein_coding MGP_NODShiLtJ_T0099097.1 MGP_NODShiLtJ_G0037491.1 mouse_genomes_project 2 24986114 24986209 + Gm25220 snRNA snRNA MGP_NODShiLtJ_T0007101.1 MGP_NODShiLtJ_G0005817.1 mouse_genomes_project 2 24973602 24978472 - AA543186 lincRNA lincRNA MGP_NODShiLtJ_T0007281.1 MGP_NODShiLtJ_G0005962.1 mouse_genomes_project 2 154557017 154600054 + Gm14055 lincRNA lincRNA MGP_NODShiLtJ_T0056070.1 MGP_NODShiLtJ_G0026021.1 mouse_genomes_project 2 115667088 115756519 + MGP_NODShiLtJ_P0056070 Pamr1 protein_coding protein_coding MGP_NODShiLtJ_T0056071.1 MGP_NODShiLtJ_G0026021.1 mouse_genomes_project 2 115667225 115748034 + Pamr1 protein_coding retained_intron MGP_NODShiLtJ_T0056072.1 MGP_NODShiLtJ_G0026021.1 mouse_genomes_project 2 115748410 115754258 + Pamr1 protein_coding retained_intron MGP_NODShiLtJ_T0013470.1 MGP_NODShiLtJ_G0011578.1 mouse_genomes_project 2 76581791 76582416 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013450.1 MGP_NODShiLtJ_G0011558.1 mouse_genomes_project 2 66394890 66395510 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057924.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170670584 170719140 - MGP_NODShiLtJ_P0057924 Snph protein_coding protein_coding MGP_NODShiLtJ_T0057925.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170670584 170719164 - MGP_NODShiLtJ_P0057925 Snph protein_coding protein_coding MGP_NODShiLtJ_T0057926.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170670599 170719158 - MGP_NODShiLtJ_P0057926 Snph protein_coding protein_coding MGP_NODShiLtJ_T0057927.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170671766 170719184 - MGP_NODShiLtJ_P0057927 Snph protein_coding protein_coding MGP_NODShiLtJ_T0057928.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170677203 170719062 - MGP_NODShiLtJ_P0057928 Snph protein_coding protein_coding MGP_NODShiLtJ_T0057929.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170680864 170719117 - Snph protein_coding retained_intron MGP_NODShiLtJ_T0057930.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170681027 170719131 - MGP_NODShiLtJ_P0057930 Snph protein_coding protein_coding MGP_NODShiLtJ_T0057931.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170681044 170719152 - MGP_NODShiLtJ_P0057931 Snph protein_coding protein_coding MGP_NODShiLtJ_T0057932.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170681252 170719164 - Snph protein_coding processed_transcript MGP_NODShiLtJ_T0057933.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170700754 170719158 - Snph protein_coding processed_transcript MGP_NODShiLtJ_T0057934.1 MGP_NODShiLtJ_G0026461.1 mouse_genomes_project 2 170718323 170719144 - Snph protein_coding retained_intron MGP_NODShiLtJ_T0058355.1 MGP_NODShiLtJ_G0026573.1 mouse_genomes_project 2 175576336 175610638 - MGP_NODShiLtJ_P0058355 Fer1l4 protein_coding protein_coding MGP_NODShiLtJ_T0058356.1 MGP_NODShiLtJ_G0026573.1 mouse_genomes_project 2 175576337 175582084 - Fer1l4 protein_coding retained_intron MGP_NODShiLtJ_T0058357.1 MGP_NODShiLtJ_G0026573.1 mouse_genomes_project 2 175576338 175594365 - Fer1l4 protein_coding retained_intron MGP_NODShiLtJ_T0058358.1 MGP_NODShiLtJ_G0026573.1 mouse_genomes_project 2 175587105 175589160 - MGP_NODShiLtJ_P0058358 Fer1l4 protein_coding protein_coding MGP_NODShiLtJ_T0058359.1 MGP_NODShiLtJ_G0026573.1 mouse_genomes_project 2 175587254 175589162 - Fer1l4 protein_coding retained_intron MGP_NODShiLtJ_T0058360.1 MGP_NODShiLtJ_G0026573.1 mouse_genomes_project 2 175592739 175595100 - MGP_NODShiLtJ_P0058360 Fer1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013452.1 MGP_NODShiLtJ_G0011560.1 mouse_genomes_project 2 67166336 67167035 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056348.1 MGP_NODShiLtJ_G0026099.1 mouse_genomes_project 2 126917066 126917681 + MGP_NODShiLtJ_P0056348 protein_coding protein_coding MGP_NODShiLtJ_T0017599.1 MGP_NODShiLtJ_G0015270.1 mouse_genomes_project 2 25478770 25489481 - Gm13538 processed_transcript processed_transcript MGP_NODShiLtJ_T0101794.1 MGP_NODShiLtJ_G0039962.1 mouse_genomes_project 2 37785664 37785918 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0057445.1 MGP_NODShiLtJ_G0026343.1 mouse_genomes_project 2 147821190 147842681 + MGP_NODShiLtJ_P0057445 Cdc25b protein_coding protein_coding MGP_NODShiLtJ_T0057446.1 MGP_NODShiLtJ_G0026343.1 mouse_genomes_project 2 147821199 147842683 + MGP_NODShiLtJ_P0057446 Cdc25b protein_coding protein_coding MGP_NODShiLtJ_T0057447.1 MGP_NODShiLtJ_G0026343.1 mouse_genomes_project 2 147822399 147826148 + Cdc25b protein_coding retained_intron MGP_NODShiLtJ_T0057448.1 MGP_NODShiLtJ_G0026343.1 mouse_genomes_project 2 147825579 147826332 + Cdc25b protein_coding retained_intron MGP_NODShiLtJ_T0057449.1 MGP_NODShiLtJ_G0026343.1 mouse_genomes_project 2 147825972 147827622 + Cdc25b protein_coding retained_intron MGP_NODShiLtJ_T0057450.1 MGP_NODShiLtJ_G0026343.1 mouse_genomes_project 2 147826042 147827509 + Cdc25b protein_coding retained_intron MGP_NODShiLtJ_T0057451.1 MGP_NODShiLtJ_G0026343.1 mouse_genomes_project 2 147827103 147828636 + Cdc25b protein_coding retained_intron MGP_NODShiLtJ_T0100357.1 MGP_NODShiLtJ_G0038751.1 mouse_genomes_project 2 33251368 33251498 + Snora65 snoRNA snoRNA MGP_NODShiLtJ_T0013677.1 MGP_NODShiLtJ_G0011785.1 mouse_genomes_project 2 162160077 162160410 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010349.1 MGP_NODShiLtJ_G0008482.1 mouse_genomes_project 2 138584897 138584976 + Mir147 miRNA miRNA MGP_NODShiLtJ_T0054156.1 MGP_NODShiLtJ_G0025497.1 mouse_genomes_project 2 36563886 36594640 + MGP_NODShiLtJ_P0054156 Morn5 protein_coding protein_coding MGP_NODShiLtJ_T0001046.1 MGP_NODShiLtJ_G0000972.1 mouse_genomes_project 2 38796520 38800470 - TEC TEC MGP_NODShiLtJ_T0013762.1 MGP_NODShiLtJ_G0011870.1 mouse_genomes_project 2 200808985 200809736 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055580.1 MGP_NODShiLtJ_G0025903.1 mouse_genomes_project 2 99358509 99359445 - MGP_NODShiLtJ_P0055580 Olfr1214 protein_coding protein_coding MGP_NODShiLtJ_T0055995.1 MGP_NODShiLtJ_G0026004.1 mouse_genomes_project 2 104952675 104967519 - MGP_NODShiLtJ_P0055995 Accsl protein_coding protein_coding MGP_NODShiLtJ_T0055996.1 MGP_NODShiLtJ_G0026004.1 mouse_genomes_project 2 104952676 104954336 - MGP_NODShiLtJ_P0055996 Accsl protein_coding protein_coding MGP_NODShiLtJ_T0055997.1 MGP_NODShiLtJ_G0026004.1 mouse_genomes_project 2 104952681 104954048 - Accsl protein_coding processed_transcript MGP_NODShiLtJ_T0055998.1 MGP_NODShiLtJ_G0026004.1 mouse_genomes_project 2 104958359 104962112 - Accsl protein_coding processed_transcript MGP_NODShiLtJ_T0055999.1 MGP_NODShiLtJ_G0026004.1 mouse_genomes_project 2 104959073 104967519 - Accsl protein_coding processed_transcript MGP_NODShiLtJ_T0056000.1 MGP_NODShiLtJ_G0026004.1 mouse_genomes_project 2 104963170 104967434 - MGP_NODShiLtJ_P0056000 Accsl protein_coding protein_coding MGP_NODShiLtJ_T0056001.1 MGP_NODShiLtJ_G0026004.1 mouse_genomes_project 2 104963170 104967444 - MGP_NODShiLtJ_P0056001 Accsl protein_coding protein_coding MGP_NODShiLtJ_T0056002.1 MGP_NODShiLtJ_G0026004.1 mouse_genomes_project 2 104963322 104967055 - Accsl protein_coding processed_transcript MGP_NODShiLtJ_T0057641.1 MGP_NODShiLtJ_G0026384.1 mouse_genomes_project 2 157816969 157885721 - MGP_NODShiLtJ_P0057641 Esf1 protein_coding protein_coding MGP_NODShiLtJ_T0057642.1 MGP_NODShiLtJ_G0026384.1 mouse_genomes_project 2 157851439 157868660 - Esf1 protein_coding retained_intron MGP_NODShiLtJ_T0057644.1 MGP_NODShiLtJ_G0026384.1 mouse_genomes_project 2 157870245 157875619 - Esf1 protein_coding retained_intron MGP_NODShiLtJ_T0057645.1 MGP_NODShiLtJ_G0026384.1 mouse_genomes_project 2 157870280 157873100 - Esf1 protein_coding retained_intron MGP_NODShiLtJ_T0057646.1 MGP_NODShiLtJ_G0026384.1 mouse_genomes_project 2 157874499 157875619 - Esf1 protein_coding retained_intron MGP_NODShiLtJ_T0055100.1 MGP_NODShiLtJ_G0025691.1 mouse_genomes_project 2 82047551 82049753 + MGP_NODShiLtJ_P0055100 Hoxd1 protein_coding protein_coding MGP_NODShiLtJ_T0010353.1 MGP_NODShiLtJ_G0008486.1 mouse_genomes_project 2 145392774 145392888 - Gm22859 miRNA miRNA MGP_NODShiLtJ_T0010237.1 MGP_NODShiLtJ_G0008370.1 mouse_genomes_project 2 8306205 8306299 + Mir466f-1 miRNA miRNA MGP_NODShiLtJ_T0058807.1 MGP_NODShiLtJ_G0026664.1 mouse_genomes_project 2 184594335 184596038 + MGP_NODShiLtJ_P0058807 Svs6 protein_coding protein_coding MGP_NODShiLtJ_T0013302.1 MGP_NODShiLtJ_G0011410.1 mouse_genomes_project 2 7925475 7927780 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058491.1 MGP_NODShiLtJ_G0026590.1 mouse_genomes_project 2 176472843 176483312 + MGP_NODShiLtJ_P0058491 1110008F13Rik protein_coding protein_coding MGP_NODShiLtJ_T0058492.1 MGP_NODShiLtJ_G0026590.1 mouse_genomes_project 2 176472854 176483147 + 1110008F13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0058493.1 MGP_NODShiLtJ_G0026590.1 mouse_genomes_project 2 176472860 176476703 + 1110008F13Rik protein_coding retained_intron MGP_NODShiLtJ_T0058495.1 MGP_NODShiLtJ_G0026590.1 mouse_genomes_project 2 176482290 176483145 + 1110008F13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0058860.1 MGP_NODShiLtJ_G0026683.1 mouse_genomes_project 2 184983810 184996843 - MGP_NODShiLtJ_P0058860 Wfdc11 protein_coding protein_coding MGP_NODShiLtJ_T0058861.1 MGP_NODShiLtJ_G0026683.1 mouse_genomes_project 2 184983953 184986454 - MGP_NODShiLtJ_P0058861 Wfdc11 protein_coding protein_coding MGP_NODShiLtJ_T0013301.1 MGP_NODShiLtJ_G0011409.1 mouse_genomes_project 2 7365205 7365713 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013585.1 MGP_NODShiLtJ_G0011693.1 mouse_genomes_project 2 118114118 118115301 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097801.1 MGP_NODShiLtJ_G0036213.1 mouse_genomes_project 2 124820158 124820367 - pseudogene pseudogene MGP_NODShiLtJ_T0057826.1 MGP_NODShiLtJ_G0026429.1 mouse_genomes_project 2 167379625 167384713 + MGP_NODShiLtJ_P0057826 Cstl1 protein_coding protein_coding MGP_NODShiLtJ_T0057827.1 MGP_NODShiLtJ_G0026429.1 mouse_genomes_project 2 167379628 167384658 + MGP_NODShiLtJ_P0057827 Cstl1 protein_coding protein_coding MGP_NODShiLtJ_T0057828.1 MGP_NODShiLtJ_G0026429.1 mouse_genomes_project 2 167379663 167384658 + MGP_NODShiLtJ_P0057828 Cstl1 protein_coding protein_coding MGP_NODShiLtJ_T0055968.1 MGP_NODShiLtJ_G0026000.1 mouse_genomes_project 2 104645479 104647962 + MGP_NODShiLtJ_P0055968 Gm10803 protein_coding protein_coding MGP_NODShiLtJ_T0055350.1 MGP_NODShiLtJ_G0025739.1 mouse_genomes_project 2 93470176 93477688 - MGP_NODShiLtJ_P0055350 Tmx2 protein_coding protein_coding MGP_NODShiLtJ_T0055351.1 MGP_NODShiLtJ_G0025739.1 mouse_genomes_project 2 93470176 93476978 - MGP_NODShiLtJ_P0055351 Tmx2 protein_coding protein_coding MGP_NODShiLtJ_T0055352.1 MGP_NODShiLtJ_G0025739.1 mouse_genomes_project 2 93470177 93476916 - MGP_NODShiLtJ_P0055352 Tmx2 protein_coding protein_coding MGP_NODShiLtJ_T0055353.1 MGP_NODShiLtJ_G0025739.1 mouse_genomes_project 2 93471123 93476909 - Tmx2 protein_coding processed_transcript MGP_NODShiLtJ_T0055354.1 MGP_NODShiLtJ_G0025739.1 mouse_genomes_project 2 93471201 93476903 - Tmx2 protein_coding processed_transcript MGP_NODShiLtJ_T0055355.1 MGP_NODShiLtJ_G0025739.1 mouse_genomes_project 2 93474965 93478000 - MGP_NODShiLtJ_P0055355 Tmx2 protein_coding protein_coding MGP_NODShiLtJ_T0057815.1 MGP_NODShiLtJ_G0026423.1 mouse_genomes_project 2 167021239 167022663 + MGP_NODShiLtJ_P0057815 Sstr4 protein_coding protein_coding MGP_NODShiLtJ_T0054180.1 MGP_NODShiLtJ_G0025503.1 mouse_genomes_project 2 36945695 36946625 + MGP_NODShiLtJ_P0054180 Olfr339 protein_coding protein_coding MGP_NODShiLtJ_T0055108.1 MGP_NODShiLtJ_G0025695.1 mouse_genomes_project 2 83231119 83342572 + MGP_NODShiLtJ_P0055108 protein_coding protein_coding MGP_NODShiLtJ_T0055109.1 MGP_NODShiLtJ_G0025695.1 mouse_genomes_project 2 83231131 83302949 + MGP_NODShiLtJ_P0055109 protein_coding protein_coding MGP_NODShiLtJ_T0055110.1 MGP_NODShiLtJ_G0025695.1 mouse_genomes_project 2 83231233 83337066 + MGP_NODShiLtJ_P0055110 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055111.1 MGP_NODShiLtJ_G0025695.1 mouse_genomes_project 2 83231447 83337101 + MGP_NODShiLtJ_P0055111 protein_coding protein_coding MGP_NODShiLtJ_T0055112.1 MGP_NODShiLtJ_G0025695.1 mouse_genomes_project 2 83272328 83283086 + MGP_NODShiLtJ_P0055112 protein_coding protein_coding MGP_NODShiLtJ_T0055113.1 MGP_NODShiLtJ_G0025695.1 mouse_genomes_project 2 83277874 83297206 + protein_coding processed_transcript MGP_NODShiLtJ_T0055114.1 MGP_NODShiLtJ_G0025695.1 mouse_genomes_project 2 83300939 83337171 + MGP_NODShiLtJ_P0055114 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055115.1 MGP_NODShiLtJ_G0025695.1 mouse_genomes_project 2 83319678 83322178 + protein_coding retained_intron MGP_NODShiLtJ_T0054789.1 MGP_NODShiLtJ_G0025626.1 mouse_genomes_project 2 75238693 75271754 + MGP_NODShiLtJ_P0054789 4933409G03Rik protein_coding protein_coding MGP_NODShiLtJ_T0054790.1 MGP_NODShiLtJ_G0025626.1 mouse_genomes_project 2 75248922 75274420 + MGP_NODShiLtJ_P0054790 4933409G03Rik protein_coding protein_coding MGP_NODShiLtJ_T0101099.1 MGP_NODShiLtJ_G0039447.1 mouse_genomes_project 2 56667418 56667803 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0057416.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147670042 147673488 - Adam33 protein_coding retained_intron MGP_NODShiLtJ_T0057417.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147670268 147683303 - MGP_NODShiLtJ_P0057417 Adam33 protein_coding protein_coding MGP_NODShiLtJ_T0057418.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147670276 147683058 - Adam33 protein_coding retained_intron MGP_NODShiLtJ_T0057419.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147670314 147675813 - MGP_NODShiLtJ_P0057419 Adam33 protein_coding protein_coding MGP_NODShiLtJ_T0057420.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147670326 147683034 - MGP_NODShiLtJ_P0057420 Adam33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057421.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147670560 147683303 - MGP_NODShiLtJ_P0057421 Adam33 protein_coding protein_coding MGP_NODShiLtJ_T0057422.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147670561 147675927 - Adam33 protein_coding retained_intron MGP_NODShiLtJ_T0057423.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147672493 147673978 - MGP_NODShiLtJ_P0057423 Adam33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057424.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147672541 147673968 - Adam33 protein_coding processed_transcript MGP_NODShiLtJ_T0057425.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147672672 147673511 - Adam33 protein_coding processed_transcript MGP_NODShiLtJ_T0057426.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147672973 147673981 - Adam33 protein_coding retained_intron MGP_NODShiLtJ_T0057427.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147676991 147683002 - MGP_NODShiLtJ_P0057427 Adam33 protein_coding protein_coding MGP_NODShiLtJ_T0057428.1 MGP_NODShiLtJ_G0026336.1 mouse_genomes_project 2 147681510 147683032 - Adam33 protein_coding retained_intron MGP_NODShiLtJ_T0013502.1 MGP_NODShiLtJ_G0011610.1 mouse_genomes_project 2 87065911 87066442 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055473.1 MGP_NODShiLtJ_G0025808.1 mouse_genomes_project 2 95936586 95940188 - MGP_NODShiLtJ_P0055473 protein_coding protein_coding MGP_NODShiLtJ_T0052573.1 MGP_NODShiLtJ_G0025238.1 mouse_genomes_project 2 22849468 22921333 - MGP_NODShiLtJ_P0052573 protein_coding protein_coding MGP_NODShiLtJ_T0052574.1 MGP_NODShiLtJ_G0025238.1 mouse_genomes_project 2 22861104 22921307 - MGP_NODShiLtJ_P0052574 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052575.1 MGP_NODShiLtJ_G0025238.1 mouse_genomes_project 2 22861702 22921207 - MGP_NODShiLtJ_P0052575 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052576.1 MGP_NODShiLtJ_G0025238.1 mouse_genomes_project 2 22861966 22866971 - protein_coding retained_intron MGP_NODShiLtJ_T0052577.1 MGP_NODShiLtJ_G0025238.1 mouse_genomes_project 2 22891210 22921335 - MGP_NODShiLtJ_P0052577 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100374.1 MGP_NODShiLtJ_G0038768.1 mouse_genomes_project 2 73916694 73916826 + Gm23328 snoRNA snoRNA MGP_NODShiLtJ_T0054435.1 MGP_NODShiLtJ_G0025565.1 mouse_genomes_project 2 55781280 55792720 - MGP_NODShiLtJ_P0054435 Rbm43 protein_coding protein_coding MGP_NODShiLtJ_T0054436.1 MGP_NODShiLtJ_G0025565.1 mouse_genomes_project 2 55781280 55792876 - MGP_NODShiLtJ_P0054436 Rbm43 protein_coding protein_coding MGP_NODShiLtJ_T0054437.1 MGP_NODShiLtJ_G0025565.1 mouse_genomes_project 2 55781283 55792357 - MGP_NODShiLtJ_P0054437 Rbm43 protein_coding protein_coding MGP_NODShiLtJ_T0054438.1 MGP_NODShiLtJ_G0025565.1 mouse_genomes_project 2 55782214 55783844 - Rbm43 protein_coding processed_transcript MGP_NODShiLtJ_T0054439.1 MGP_NODShiLtJ_G0025565.1 mouse_genomes_project 2 55782479 55791110 - Rbm43 protein_coding processed_transcript MGP_NODShiLtJ_T0054440.1 MGP_NODShiLtJ_G0025565.1 mouse_genomes_project 2 55782698 55792387 - Rbm43 protein_coding processed_transcript MGP_NODShiLtJ_T0055137.1 MGP_NODShiLtJ_G0025705.1 mouse_genomes_project 2 84102019 84112083 - MGP_NODShiLtJ_P0055137 Fkbp7 protein_coding protein_coding MGP_NODShiLtJ_T0055138.1 MGP_NODShiLtJ_G0025705.1 mouse_genomes_project 2 84102038 84104219 - Fkbp7 protein_coding processed_transcript MGP_NODShiLtJ_T0055139.1 MGP_NODShiLtJ_G0025705.1 mouse_genomes_project 2 84104682 84112129 - MGP_NODShiLtJ_P0055139 Fkbp7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055140.1 MGP_NODShiLtJ_G0025705.1 mouse_genomes_project 2 84110374 84112098 - Fkbp7 protein_coding retained_intron MGP_NODShiLtJ_T0057311.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146821385 146827984 + protein_coding retained_intron MGP_NODShiLtJ_T0057312.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146821387 146825863 + protein_coding retained_intron MGP_NODShiLtJ_T0057313.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146821396 146824477 + MGP_NODShiLtJ_P0057313 protein_coding protein_coding MGP_NODShiLtJ_T0057314.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146821415 146825381 + MGP_NODShiLtJ_P0057314 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0057315.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146821433 146823038 + MGP_NODShiLtJ_P0057315 protein_coding protein_coding MGP_NODShiLtJ_T0057316.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146821772 146822636 + protein_coding retained_intron MGP_NODShiLtJ_T0057317.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146822735 146823206 + protein_coding retained_intron MGP_NODShiLtJ_T0057318.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146823098 146825863 + MGP_NODShiLtJ_P0057318 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057319.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146823239 146824510 + protein_coding retained_intron MGP_NODShiLtJ_T0057320.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146823414 146824895 + protein_coding retained_intron MGP_NODShiLtJ_T0057321.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146823536 146824899 + MGP_NODShiLtJ_P0057321 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057322.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146823604 146824222 + protein_coding retained_intron MGP_NODShiLtJ_T0057323.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146824161 146825414 + protein_coding retained_intron MGP_NODShiLtJ_T0057324.1 MGP_NODShiLtJ_G0026314.1 mouse_genomes_project 2 146824254 146825181 + MGP_NODShiLtJ_P0057324 protein_coding protein_coding MGP_NODShiLtJ_T0059263.1 MGP_NODShiLtJ_G0026772.1 mouse_genomes_project 2 194408268 194414524 + MGP_NODShiLtJ_P0059263 Pck1 protein_coding protein_coding MGP_NODShiLtJ_T0059264.1 MGP_NODShiLtJ_G0026772.1 mouse_genomes_project 2 194408293 194410030 + Pck1 protein_coding processed_transcript MGP_NODShiLtJ_T0059265.1 MGP_NODShiLtJ_G0026772.1 mouse_genomes_project 2 194408293 194409680 + Pck1 protein_coding retained_intron MGP_NODShiLtJ_T0059266.1 MGP_NODShiLtJ_G0026772.1 mouse_genomes_project 2 194408302 194414522 + Pck1 protein_coding retained_intron MGP_NODShiLtJ_T0056722.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136166320 136201567 - MGP_NODShiLtJ_P0056722 Zfp106 protein_coding protein_coding MGP_NODShiLtJ_T0056723.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136166794 136223889 - MGP_NODShiLtJ_P0056723 Zfp106 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056724.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136167037 136171585 - Zfp106 protein_coding retained_intron MGP_NODShiLtJ_T0056725.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136177604 136179363 - Zfp106 protein_coding retained_intron MGP_NODShiLtJ_T0056726.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136181535 136183462 - MGP_NODShiLtJ_P0056726 Zfp106 protein_coding protein_coding MGP_NODShiLtJ_T0056727.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136185112 136223890 - Zfp106 protein_coding retained_intron MGP_NODShiLtJ_T0056728.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136185575 136187375 - Zfp106 protein_coding retained_intron MGP_NODShiLtJ_T0056729.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136187199 136190915 - MGP_NODShiLtJ_P0056729 Zfp106 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056730.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136190742 136223919 - MGP_NODShiLtJ_P0056730 Zfp106 protein_coding protein_coding MGP_NODShiLtJ_T0056731.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136193992 136213683 - MGP_NODShiLtJ_P0056731 Zfp106 protein_coding protein_coding MGP_NODShiLtJ_T0056732.1 MGP_NODShiLtJ_G0026184.1 mouse_genomes_project 2 136194125 136223910 - Zfp106 protein_coding processed_transcript MGP_NODShiLtJ_T0100371.1 MGP_NODShiLtJ_G0038765.1 mouse_genomes_project 2 66900353 66900482 + Gm22338 snoRNA snoRNA MGP_NODShiLtJ_T0052585.1 MGP_NODShiLtJ_G0025243.1 mouse_genomes_project 2 23748791 23759388 + MGP_NODShiLtJ_P0052585 Il1f6 protein_coding protein_coding MGP_NODShiLtJ_T0052586.1 MGP_NODShiLtJ_G0025243.1 mouse_genomes_project 2 23748878 23759211 + Il1f6 protein_coding processed_transcript MGP_NODShiLtJ_T0100419.1 MGP_NODShiLtJ_G0038813.1 mouse_genomes_project 2 178151124 178151257 + Gm25129 snoRNA snoRNA MGP_NODShiLtJ_T0003925.1 MGP_NODShiLtJ_G0003496.1 mouse_genomes_project 2 65876396 65879554 + Gm13583 antisense antisense MGP_NODShiLtJ_T0003926.1 MGP_NODShiLtJ_G0003496.1 mouse_genomes_project 2 65876398 65876521 + Gm13583 antisense antisense MGP_NODShiLtJ_T0003927.1 MGP_NODShiLtJ_G0003496.1 mouse_genomes_project 2 65877985 65878905 + Gm13583 antisense antisense MGP_NODShiLtJ_T0004015.1 MGP_NODShiLtJ_G0003555.1 mouse_genomes_project 2 135638229 135640835 - Gm13999 antisense antisense MGP_NODShiLtJ_T0056626.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135494095 135582594 + MGP_NODShiLtJ_P0056626 Mga protein_coding protein_coding MGP_NODShiLtJ_T0056627.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135494095 135582594 + MGP_NODShiLtJ_P0056627 Mga protein_coding protein_coding MGP_NODShiLtJ_T0056628.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135494095 135579246 + MGP_NODShiLtJ_P0056628 Mga protein_coding protein_coding MGP_NODShiLtJ_T0056629.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135494095 135582594 + MGP_NODShiLtJ_P0056629 Mga protein_coding protein_coding MGP_NODShiLtJ_T0056630.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135494099 135517069 + Mga protein_coding retained_intron MGP_NODShiLtJ_T0056631.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135494115 135527063 + Mga protein_coding processed_transcript MGP_NODShiLtJ_T0056632.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135494143 135575969 + MGP_NODShiLtJ_P0056632 Mga protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056633.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135494172 135571846 + MGP_NODShiLtJ_P0056633 Mga protein_coding protein_coding MGP_NODShiLtJ_T0056634.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135520758 135524460 + Mga protein_coding retained_intron MGP_NODShiLtJ_T0056635.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135536755 135540926 + Mga protein_coding processed_transcript MGP_NODShiLtJ_T0056636.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135536924 135553177 + Mga protein_coding processed_transcript MGP_NODShiLtJ_T0056637.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135537019 135548261 + Mga protein_coding processed_transcript MGP_NODShiLtJ_T0056638.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135547970 135554661 + Mga protein_coding processed_transcript MGP_NODShiLtJ_T0056639.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135548474 135554454 + Mga protein_coding processed_transcript MGP_NODShiLtJ_T0056640.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135569370 135576369 + Mga protein_coding processed_transcript MGP_NODShiLtJ_T0056641.1 MGP_NODShiLtJ_G0026170.1 mouse_genomes_project 2 135571456 135573274 + Mga protein_coding retained_intron MGP_NODShiLtJ_T0057583.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 152781186 152870153 + Plcb4 protein_coding processed_transcript MGP_NODShiLtJ_T0057584.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 152782666 153012042 + Plcb4 protein_coding retained_intron MGP_NODShiLtJ_T0057585.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 152782666 152870240 + Plcb4 protein_coding processed_transcript MGP_NODShiLtJ_T0057586.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 152782673 153122091 + MGP_NODShiLtJ_P0057586 Plcb4 protein_coding protein_coding MGP_NODShiLtJ_T0057587.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 152869231 153045413 + Plcb4 protein_coding retained_intron MGP_NODShiLtJ_T0057588.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 152869231 153153172 + MGP_NODShiLtJ_P0057588 Plcb4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057589.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 152893005 153043334 + Plcb4 protein_coding processed_transcript MGP_NODShiLtJ_T0057590.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 152938049 153152971 + MGP_NODShiLtJ_P0057590 Plcb4 protein_coding protein_coding MGP_NODShiLtJ_T0057591.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 153006028 153154503 + MGP_NODShiLtJ_P0057591 Plcb4 protein_coding protein_coding MGP_NODShiLtJ_T0057592.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 153021914 153078425 + Plcb4 protein_coding processed_transcript MGP_NODShiLtJ_T0057593.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 153081191 153089472 + Plcb4 protein_coding processed_transcript MGP_NODShiLtJ_T0057594.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 153085589 153089425 + Plcb4 protein_coding processed_transcript MGP_NODShiLtJ_T0057595.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 153122106 153127249 + Plcb4 protein_coding processed_transcript MGP_NODShiLtJ_T0057596.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 153126928 153154494 + MGP_NODShiLtJ_P0057596 Plcb4 protein_coding protein_coding MGP_NODShiLtJ_T0057597.1 MGP_NODShiLtJ_G0026372.1 mouse_genomes_project 2 153147132 153147946 + Plcb4 protein_coding processed_transcript MGP_NODShiLtJ_T0007203.1 MGP_NODShiLtJ_G0005901.1 mouse_genomes_project 2 103531175 103544199 - Gm13817 lincRNA lincRNA MGP_NODShiLtJ_T0052969.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25714070 25723448 - Ubac1 protein_coding processed_transcript MGP_NODShiLtJ_T0052970.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25714070 25737467 - MGP_NODShiLtJ_P0052970 Ubac1 protein_coding protein_coding MGP_NODShiLtJ_T0052971.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25714333 25724751 - Ubac1 protein_coding processed_transcript MGP_NODShiLtJ_T0052972.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25720931 25732032 - MGP_NODShiLtJ_P0052972 Ubac1 protein_coding protein_coding MGP_NODShiLtJ_T0052973.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25722054 25737252 - MGP_NODShiLtJ_P0052973 Ubac1 protein_coding protein_coding MGP_NODShiLtJ_T0052974.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25724422 25726673 - Ubac1 protein_coding processed_transcript MGP_NODShiLtJ_T0052975.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25726254 25733198 - Ubac1 protein_coding processed_transcript MGP_NODShiLtJ_T0052976.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25730631 25737286 - Ubac1 protein_coding processed_transcript MGP_NODShiLtJ_T0052977.1 MGP_NODShiLtJ_G0025314.1 mouse_genomes_project 2 25731684 25737322 - Ubac1 protein_coding processed_transcript MGP_NODShiLtJ_T0013472.1 MGP_NODShiLtJ_G0011580.1 mouse_genomes_project 2 76619711 76620087 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053600.1 MGP_NODShiLtJ_G0025415.1 mouse_genomes_project 2 31054394 31060451 + MGP_NODShiLtJ_P0053600 Tor1b protein_coding protein_coding MGP_NODShiLtJ_T0053601.1 MGP_NODShiLtJ_G0025415.1 mouse_genomes_project 2 31054414 31060447 + Tor1b protein_coding retained_intron MGP_NODShiLtJ_T0053602.1 MGP_NODShiLtJ_G0025415.1 mouse_genomes_project 2 31054426 31057930 + MGP_NODShiLtJ_P0053602 Tor1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053603.1 MGP_NODShiLtJ_G0025415.1 mouse_genomes_project 2 31054607 31058421 + Tor1b protein_coding retained_intron MGP_NODShiLtJ_T0053604.1 MGP_NODShiLtJ_G0025415.1 mouse_genomes_project 2 31054622 31060448 + MGP_NODShiLtJ_P0053604 Tor1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053605.1 MGP_NODShiLtJ_G0025415.1 mouse_genomes_project 2 31055187 31058309 + MGP_NODShiLtJ_P0053605 Tor1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053606.1 MGP_NODShiLtJ_G0025415.1 mouse_genomes_project 2 31056688 31058548 + Tor1b protein_coding processed_transcript MGP_NODShiLtJ_T0004112.1 MGP_NODShiLtJ_G0003627.1 mouse_genomes_project 2 185548279 185552836 + Gm14397 antisense antisense MGP_NODShiLtJ_T0007177.1 MGP_NODShiLtJ_G0005879.1 mouse_genomes_project 2 81978605 81980447 + Gm14396 lincRNA lincRNA MGP_NODShiLtJ_T0007178.1 MGP_NODShiLtJ_G0005879.1 mouse_genomes_project 2 81978686 81980447 + Gm14396 lincRNA lincRNA MGP_NODShiLtJ_T0058863.1 MGP_NODShiLtJ_G0026685.1 mouse_genomes_project 2 185033772 185037723 + MGP_NODShiLtJ_P0058863 Spint4 protein_coding protein_coding MGP_NODShiLtJ_T0056222.1 MGP_NODShiLtJ_G0026051.1 mouse_genomes_project 2 118575607 118737915 + MGP_NODShiLtJ_P0056222 Them7 protein_coding protein_coding MGP_NODShiLtJ_T0056223.1 MGP_NODShiLtJ_G0026051.1 mouse_genomes_project 2 118575629 118737154 + Them7 protein_coding processed_transcript MGP_NODShiLtJ_T0013481.1 MGP_NODShiLtJ_G0011589.1 mouse_genomes_project 2 80072596 80072893 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056063.1 MGP_NODShiLtJ_G0026018.1 mouse_genomes_project 2 115031083 115277720 - MGP_NODShiLtJ_P0056063 Ldlrad3 protein_coding protein_coding MGP_NODShiLtJ_T0056064.1 MGP_NODShiLtJ_G0026018.1 mouse_genomes_project 2 115031083 115277693 - MGP_NODShiLtJ_P0056064 Ldlrad3 protein_coding protein_coding MGP_NODShiLtJ_T0056065.1 MGP_NODShiLtJ_G0026018.1 mouse_genomes_project 2 115200211 115227199 - Ldlrad3 protein_coding processed_transcript MGP_NODShiLtJ_T0013285.1 MGP_NODShiLtJ_G0011393.1 mouse_genomes_project 2 509789 510105 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101845.1 MGP_NODShiLtJ_G0040013.1 mouse_genomes_project 2 167589228 167593196 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0052513.1 MGP_NODShiLtJ_G0025226.1 mouse_genomes_project 2 20285337 20294598 + MGP_NODShiLtJ_P0052513 Thnsl1 protein_coding protein_coding MGP_NODShiLtJ_T0052514.1 MGP_NODShiLtJ_G0025226.1 mouse_genomes_project 2 20285352 20293965 + MGP_NODShiLtJ_P0052514 Thnsl1 protein_coding protein_coding MGP_NODShiLtJ_T0052515.1 MGP_NODShiLtJ_G0025226.1 mouse_genomes_project 2 20285372 20292868 + MGP_NODShiLtJ_P0052515 Thnsl1 protein_coding protein_coding MGP_NODShiLtJ_T0052516.1 MGP_NODShiLtJ_G0025226.1 mouse_genomes_project 2 20285386 20291131 + MGP_NODShiLtJ_P0052516 Thnsl1 protein_coding protein_coding MGP_NODShiLtJ_T0052517.1 MGP_NODShiLtJ_G0025226.1 mouse_genomes_project 2 20285400 20293897 + MGP_NODShiLtJ_P0052517 Thnsl1 protein_coding protein_coding MGP_NODShiLtJ_T0059178.1 MGP_NODShiLtJ_G0026747.1 mouse_genomes_project 2 189584418 189616663 - MGP_NODShiLtJ_P0059178 Sall4 protein_coding protein_coding MGP_NODShiLtJ_T0059179.1 MGP_NODShiLtJ_G0026747.1 mouse_genomes_project 2 189584418 189616663 - MGP_NODShiLtJ_P0059179 Sall4 protein_coding protein_coding MGP_NODShiLtJ_T0059180.1 MGP_NODShiLtJ_G0026747.1 mouse_genomes_project 2 189584418 189616491 - MGP_NODShiLtJ_P0059180 Sall4 protein_coding protein_coding MGP_NODShiLtJ_T0059181.1 MGP_NODShiLtJ_G0026747.1 mouse_genomes_project 2 189590993 189592022 - MGP_NODShiLtJ_P0059181 Sall4 protein_coding protein_coding MGP_NODShiLtJ_T0059182.1 MGP_NODShiLtJ_G0026747.1 mouse_genomes_project 2 189592259 189614708 - MGP_NODShiLtJ_P0059182 Sall4 protein_coding protein_coding MGP_NODShiLtJ_T0059183.1 MGP_NODShiLtJ_G0026747.1 mouse_genomes_project 2 189592692 189617405 - Sall4 protein_coding processed_transcript MGP_NODShiLtJ_T0059184.1 MGP_NODShiLtJ_G0026747.1 mouse_genomes_project 2 189592831 189616579 - Sall4 protein_coding processed_transcript MGP_NODShiLtJ_T0052641.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24524612 24536337 - MGP_NODShiLtJ_P0052641 Arrdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052642.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24524612 24536248 - MGP_NODShiLtJ_P0052642 Arrdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052643.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24524615 24536230 - Arrdc1 protein_coding retained_intron MGP_NODShiLtJ_T0052644.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24525249 24536252 - MGP_NODShiLtJ_P0052644 Arrdc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052645.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24525315 24536230 - Arrdc1 protein_coding retained_intron MGP_NODShiLtJ_T0052646.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24525418 24536227 - MGP_NODShiLtJ_P0052646 Arrdc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052647.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24525443 24526461 - Arrdc1 protein_coding retained_intron MGP_NODShiLtJ_T0052648.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24525583 24536259 - MGP_NODShiLtJ_P0052648 Arrdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052649.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24525932 24527164 - Arrdc1 protein_coding retained_intron MGP_NODShiLtJ_T0052650.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24526172 24536139 - MGP_NODShiLtJ_P0052650 Arrdc1 protein_coding protein_coding MGP_NODShiLtJ_T0052651.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24526255 24527392 - Arrdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0052652.1 MGP_NODShiLtJ_G0025251.1 mouse_genomes_project 2 24526544 24536273 - Arrdc1 protein_coding retained_intron MGP_NODShiLtJ_T0013449.1 MGP_NODShiLtJ_G0011557.1 mouse_genomes_project 2 65941267 65941514 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058147.1 MGP_NODShiLtJ_G0026533.1 mouse_genomes_project 2 173725983 173758148 - MGP_NODShiLtJ_P0058147 Cdk5rap1 protein_coding protein_coding MGP_NODShiLtJ_T0058148.1 MGP_NODShiLtJ_G0026533.1 mouse_genomes_project 2 173725989 173757857 - MGP_NODShiLtJ_P0058148 Cdk5rap1 protein_coding protein_coding MGP_NODShiLtJ_T0058149.1 MGP_NODShiLtJ_G0026533.1 mouse_genomes_project 2 173732894 173757899 - Cdk5rap1 protein_coding processed_transcript MGP_NODShiLtJ_T0058150.1 MGP_NODShiLtJ_G0026533.1 mouse_genomes_project 2 173741151 173744889 - Cdk5rap1 protein_coding retained_intron MGP_NODShiLtJ_T0058151.1 MGP_NODShiLtJ_G0026533.1 mouse_genomes_project 2 173746543 173757869 - MGP_NODShiLtJ_P0058151 Cdk5rap1 protein_coding protein_coding MGP_NODShiLtJ_T0058152.1 MGP_NODShiLtJ_G0026533.1 mouse_genomes_project 2 173750990 173755935 - Cdk5rap1 protein_coding processed_transcript MGP_NODShiLtJ_T0058153.1 MGP_NODShiLtJ_G0026533.1 mouse_genomes_project 2 173755827 173757829 - Cdk5rap1 protein_coding processed_transcript MGP_NODShiLtJ_T0058872.1 MGP_NODShiLtJ_G0026689.1 mouse_genomes_project 2 185125014 185128024 + MGP_NODShiLtJ_P0058872 Ube2c protein_coding protein_coding MGP_NODShiLtJ_T0058873.1 MGP_NODShiLtJ_G0026689.1 mouse_genomes_project 2 185125019 185133498 + MGP_NODShiLtJ_P0058873 Ube2c protein_coding protein_coding MGP_NODShiLtJ_T0010233.1 MGP_NODShiLtJ_G0008366.1 mouse_genomes_project 2 6972577 6972654 - Gm23963 miRNA miRNA MGP_NODShiLtJ_T0054470.1 MGP_NODShiLtJ_G0025571.1 mouse_genomes_project 2 56322162 56599684 - MGP_NODShiLtJ_P0054470 Cacnb4 protein_coding protein_coding MGP_NODShiLtJ_T0054471.1 MGP_NODShiLtJ_G0025571.1 mouse_genomes_project 2 56322162 56459431 - MGP_NODShiLtJ_P0054471 Cacnb4 protein_coding protein_coding MGP_NODShiLtJ_T0054472.1 MGP_NODShiLtJ_G0025571.1 mouse_genomes_project 2 56322162 56599921 - MGP_NODShiLtJ_P0054472 Cacnb4 protein_coding protein_coding MGP_NODShiLtJ_T0054473.1 MGP_NODShiLtJ_G0025571.1 mouse_genomes_project 2 56322162 56459438 - MGP_NODShiLtJ_P0054473 Cacnb4 protein_coding protein_coding MGP_NODShiLtJ_T0054474.1 MGP_NODShiLtJ_G0025571.1 mouse_genomes_project 2 56457054 56457577 - Cacnb4 protein_coding processed_transcript MGP_NODShiLtJ_T0054475.1 MGP_NODShiLtJ_G0025571.1 mouse_genomes_project 2 56598891 56599246 - Cacnb4 protein_coding processed_transcript MGP_NODShiLtJ_T0004059.1 MGP_NODShiLtJ_G0003585.1 mouse_genomes_project 2 162352619 162362288 - Banf2os antisense antisense MGP_NODShiLtJ_T0004060.1 MGP_NODShiLtJ_G0003585.1 mouse_genomes_project 2 162353046 162362265 - Banf2os antisense antisense MGP_NODShiLtJ_T0055311.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055311 protein_coding protein_coding MGP_NODShiLtJ_T0055312.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055312 protein_coding protein_coding MGP_NODShiLtJ_T0055313.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055313 protein_coding protein_coding MGP_NODShiLtJ_T0055314.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055314 protein_coding protein_coding MGP_NODShiLtJ_T0055315.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055315 protein_coding protein_coding MGP_NODShiLtJ_T0055316.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055316 protein_coding protein_coding MGP_NODShiLtJ_T0055317.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055317 protein_coding protein_coding MGP_NODShiLtJ_T0055318.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055318 protein_coding protein_coding MGP_NODShiLtJ_T0055319.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055319 protein_coding protein_coding MGP_NODShiLtJ_T0055320.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380184 93460513 - MGP_NODShiLtJ_P0055320 protein_coding protein_coding MGP_NODShiLtJ_T0055321.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380186 93460513 - MGP_NODShiLtJ_P0055321 protein_coding protein_coding MGP_NODShiLtJ_T0055322.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380186 93460513 - MGP_NODShiLtJ_P0055322 protein_coding protein_coding MGP_NODShiLtJ_T0055323.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380186 93460513 - MGP_NODShiLtJ_P0055323 protein_coding protein_coding MGP_NODShiLtJ_T0055324.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380186 93460444 - MGP_NODShiLtJ_P0055324 protein_coding protein_coding MGP_NODShiLtJ_T0055325.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380186 93460513 - MGP_NODShiLtJ_P0055325 protein_coding protein_coding MGP_NODShiLtJ_T0055326.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380186 93460513 - MGP_NODShiLtJ_P0055326 protein_coding protein_coding MGP_NODShiLtJ_T0055327.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380186 93460513 - MGP_NODShiLtJ_P0055327 protein_coding protein_coding MGP_NODShiLtJ_T0055328.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380186 93460513 - MGP_NODShiLtJ_P0055328 protein_coding protein_coding MGP_NODShiLtJ_T0055329.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380213 93460513 - MGP_NODShiLtJ_P0055329 protein_coding protein_coding MGP_NODShiLtJ_T0055330.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380894 93460508 - MGP_NODShiLtJ_P0055330 protein_coding protein_coding MGP_NODShiLtJ_T0055331.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380894 93460508 - MGP_NODShiLtJ_P0055331 protein_coding protein_coding MGP_NODShiLtJ_T0055332.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380896 93460308 - protein_coding processed_transcript MGP_NODShiLtJ_T0055333.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380896 93459223 - MGP_NODShiLtJ_P0055333 protein_coding protein_coding MGP_NODShiLtJ_T0055334.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380896 93460533 - MGP_NODShiLtJ_P0055334 protein_coding protein_coding MGP_NODShiLtJ_T0055335.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93380896 93460278 - MGP_NODShiLtJ_P0055335 protein_coding protein_coding MGP_NODShiLtJ_T0055337.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93382646 93389811 - protein_coding processed_transcript MGP_NODShiLtJ_T0055338.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93382742 93389831 - protein_coding processed_transcript MGP_NODShiLtJ_T0055339.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93389120 93392742 - protein_coding processed_transcript MGP_NODShiLtJ_T0055340.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93404532 93422147 - protein_coding processed_transcript MGP_NODShiLtJ_T0055341.1 MGP_NODShiLtJ_G0025735.1 mouse_genomes_project 2 93404571 93458294 - protein_coding processed_transcript MGP_NODShiLtJ_T0101828.1 MGP_NODShiLtJ_G0039996.1 mouse_genomes_project 2 98849506 98850570 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010388.1 MGP_NODShiLtJ_G0008521.1 mouse_genomes_project 2 201687024 201687093 - Mir7005 miRNA miRNA MGP_NODShiLtJ_T0001038.1 MGP_NODShiLtJ_G0000964.1 mouse_genomes_project 2 33287477 33292211 - TEC TEC MGP_NODShiLtJ_T0058724.1 MGP_NODShiLtJ_G0026637.1 mouse_genomes_project 2 183239005 183276748 + MGP_NODShiLtJ_P0058724 Mybl2 protein_coding protein_coding MGP_NODShiLtJ_T0058725.1 MGP_NODShiLtJ_G0026637.1 mouse_genomes_project 2 183244572 183249789 + Mybl2 protein_coding processed_transcript MGP_NODShiLtJ_T0058726.1 MGP_NODShiLtJ_G0026637.1 mouse_genomes_project 2 183253526 183261235 + Mybl2 protein_coding retained_intron MGP_NODShiLtJ_T0058727.1 MGP_NODShiLtJ_G0026637.1 mouse_genomes_project 2 183262836 183273922 + MGP_NODShiLtJ_P0058727 Mybl2 protein_coding protein_coding MGP_NODShiLtJ_T0058728.1 MGP_NODShiLtJ_G0026637.1 mouse_genomes_project 2 183263244 183271993 + Mybl2 protein_coding retained_intron MGP_NODShiLtJ_T0007347.1 MGP_NODShiLtJ_G0006016.1 mouse_genomes_project 2 188611640 188615598 + Gm14319 lincRNA lincRNA MGP_NODShiLtJ_T0057521.1 MGP_NODShiLtJ_G0026357.1 mouse_genomes_project 2 148975977 148980093 - MGP_NODShiLtJ_P0057521 protein_coding protein_coding MGP_NODShiLtJ_T0057522.1 MGP_NODShiLtJ_G0026357.1 mouse_genomes_project 2 148976689 148979375 - protein_coding processed_transcript MGP_NODShiLtJ_T0057523.1 MGP_NODShiLtJ_G0026357.1 mouse_genomes_project 2 148978109 148979746 - protein_coding retained_intron MGP_NODShiLtJ_T0057524.1 MGP_NODShiLtJ_G0026357.1 mouse_genomes_project 2 148978209 148979381 - protein_coding retained_intron MGP_NODShiLtJ_T0017614.1 MGP_NODShiLtJ_G0015280.1 mouse_genomes_project 2 30778542 30785362 - Gm14488 processed_transcript processed_transcript MGP_NODShiLtJ_T0017615.1 MGP_NODShiLtJ_G0015280.1 mouse_genomes_project 2 30778545 30782439 - Gm14488 processed_transcript retained_intron MGP_NODShiLtJ_T0007360.1 MGP_NODShiLtJ_G0006028.1 mouse_genomes_project 2 190570351 190843361 - lincRNA lincRNA MGP_NODShiLtJ_T0007361.1 MGP_NODShiLtJ_G0006028.1 mouse_genomes_project 2 190570381 190843361 - lincRNA lincRNA MGP_NODShiLtJ_T0056986.1 MGP_NODShiLtJ_G0026232.1 mouse_genomes_project 2 138273985 138332393 + MGP_NODShiLtJ_P0056986 Slc28a2 protein_coding protein_coding MGP_NODShiLtJ_T0056988.1 MGP_NODShiLtJ_G0026232.1 mouse_genomes_project 2 138328010 138417749 + Slc28a2 protein_coding processed_transcript MGP_NODShiLtJ_T0101804.1 MGP_NODShiLtJ_G0039972.1 mouse_genomes_project 2 94593392 94593970 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004107.1 MGP_NODShiLtJ_G0003625.1 mouse_genomes_project 2 185097661 185124736 - antisense antisense MGP_NODShiLtJ_T0004108.1 MGP_NODShiLtJ_G0003625.1 mouse_genomes_project 2 185097671 185124741 - antisense antisense MGP_NODShiLtJ_T0004109.1 MGP_NODShiLtJ_G0003625.1 mouse_genomes_project 2 185097683 185124783 - antisense antisense MGP_NODShiLtJ_T0017724.1 MGP_NODShiLtJ_G0015338.1 mouse_genomes_project 2 145784549 145796232 + Gm14023 processed_transcript processed_transcript MGP_NODShiLtJ_T0059267.1 MGP_NODShiLtJ_G0026773.1 mouse_genomes_project 2 194467401 194479715 - MGP_NODShiLtJ_P0059267 Zbp1 protein_coding protein_coding MGP_NODShiLtJ_T0059268.1 MGP_NODShiLtJ_G0026773.1 mouse_genomes_project 2 194467404 194479689 - Zbp1 protein_coding retained_intron MGP_NODShiLtJ_T0059269.1 MGP_NODShiLtJ_G0026773.1 mouse_genomes_project 2 194474524 194479702 - MGP_NODShiLtJ_P0059269 Zbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053834.1 MGP_NODShiLtJ_G0025446.1 mouse_genomes_project 2 32705542 32712039 + MGP_NODShiLtJ_P0053834 Naif1 protein_coding protein_coding MGP_NODShiLtJ_T0017664.1 MGP_NODShiLtJ_G0015314.1 mouse_genomes_project 2 104073324 104080258 + 4631405J19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017665.1 MGP_NODShiLtJ_G0015314.1 mouse_genomes_project 2 104073324 104080258 + 4631405J19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017666.1 MGP_NODShiLtJ_G0015314.1 mouse_genomes_project 2 104074716 104080285 + 4631405J19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017667.1 MGP_NODShiLtJ_G0015314.1 mouse_genomes_project 2 104074717 104078555 + 4631405J19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017668.1 MGP_NODShiLtJ_G0015314.1 mouse_genomes_project 2 104075812 104092771 + 4631405J19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0055553.1 MGP_NODShiLtJ_G0025877.1 mouse_genomes_project 2 98473294 98474242 + MGP_NODShiLtJ_P0055553 Olfr1176 protein_coding protein_coding MGP_NODShiLtJ_T0013373.1 MGP_NODShiLtJ_G0011481.1 mouse_genomes_project 2 36654730 36655095 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058450.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176000004 176127839 + MGP_NODShiLtJ_P0058450 Epb41l1 protein_coding protein_coding MGP_NODShiLtJ_T0058451.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176000143 176127839 + MGP_NODShiLtJ_P0058451 Epb41l1 protein_coding protein_coding MGP_NODShiLtJ_T0058452.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176000147 176085988 + Epb41l1 protein_coding processed_transcript MGP_NODShiLtJ_T0058453.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176000179 176107471 + MGP_NODShiLtJ_P0058453 Epb41l1 protein_coding protein_coding MGP_NODShiLtJ_T0058454.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176000196 176127839 + MGP_NODShiLtJ_P0058454 Epb41l1 protein_coding protein_coding MGP_NODShiLtJ_T0058455.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176000207 176127839 + MGP_NODShiLtJ_P0058455 Epb41l1 protein_coding protein_coding MGP_NODShiLtJ_T0058456.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176057992 176083231 + Epb41l1 protein_coding processed_transcript MGP_NODShiLtJ_T0058457.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176058279 176127839 + MGP_NODShiLtJ_P0058457 Epb41l1 protein_coding protein_coding MGP_NODShiLtJ_T0058458.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176058325 176127839 + MGP_NODShiLtJ_P0058458 Epb41l1 protein_coding protein_coding MGP_NODShiLtJ_T0058459.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176077448 176127839 + MGP_NODShiLtJ_P0058459 Epb41l1 protein_coding protein_coding MGP_NODShiLtJ_T0058460.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176077463 176127845 + MGP_NODShiLtJ_P0058460 Epb41l1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058461.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176089955 176098959 + Epb41l1 protein_coding processed_transcript MGP_NODShiLtJ_T0058462.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176118178 176124644 + Epb41l1 protein_coding retained_intron MGP_NODShiLtJ_T0058463.1 MGP_NODShiLtJ_G0026584.1 mouse_genomes_project 2 176122021 176124984 + Epb41l1 protein_coding processed_transcript MGP_NODShiLtJ_T0101786.1 MGP_NODShiLtJ_G0039954.1 mouse_genomes_project 2 35264362 35265127 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003847.1 MGP_NODShiLtJ_G0003436.1 mouse_genomes_project 2 12952628 12980433 - Gm10848 antisense antisense MGP_NODShiLtJ_T0013432.1 MGP_NODShiLtJ_G0011540.1 mouse_genomes_project 2 60754817 60755050 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058116.1 MGP_NODShiLtJ_G0026520.1 mouse_genomes_project 2 173190170 173209228 + MGP_NODShiLtJ_P0058116 Bpifb2 protein_coding protein_coding MGP_NODShiLtJ_T0058117.1 MGP_NODShiLtJ_G0026520.1 mouse_genomes_project 2 173190200 173191511 + Bpifb2 protein_coding retained_intron MGP_NODShiLtJ_T0058404.1 MGP_NODShiLtJ_G0026579.1 mouse_genomes_project 2 175708619 175710374 + MGP_NODShiLtJ_P0058404 Romo1 protein_coding protein_coding MGP_NODShiLtJ_T0058405.1 MGP_NODShiLtJ_G0026579.1 mouse_genomes_project 2 175708813 175710371 + MGP_NODShiLtJ_P0058405 Romo1 protein_coding protein_coding MGP_NODShiLtJ_T0058406.1 MGP_NODShiLtJ_G0026579.1 mouse_genomes_project 2 175708817 175710360 + MGP_NODShiLtJ_P0058406 Romo1 protein_coding protein_coding MGP_NODShiLtJ_T0058407.1 MGP_NODShiLtJ_G0026579.1 mouse_genomes_project 2 175708820 175710371 + MGP_NODShiLtJ_P0058407 Romo1 protein_coding protein_coding MGP_NODShiLtJ_T0056968.1 MGP_NODShiLtJ_G0026229.1 mouse_genomes_project 2 138131070 138135728 - MGP_NODShiLtJ_P0056968 Duoxa1 protein_coding protein_coding MGP_NODShiLtJ_T0056969.1 MGP_NODShiLtJ_G0026229.1 mouse_genomes_project 2 138132429 138142467 - MGP_NODShiLtJ_P0056969 Duoxa1 protein_coding protein_coding MGP_NODShiLtJ_T0056970.1 MGP_NODShiLtJ_G0026229.1 mouse_genomes_project 2 138132432 138134591 - Duoxa1 protein_coding processed_transcript MGP_NODShiLtJ_T0056971.1 MGP_NODShiLtJ_G0026229.1 mouse_genomes_project 2 138132624 138135706 - MGP_NODShiLtJ_P0056971 Duoxa1 protein_coding protein_coding MGP_NODShiLtJ_T0056972.1 MGP_NODShiLtJ_G0026229.1 mouse_genomes_project 2 138133648 138142504 - MGP_NODShiLtJ_P0056972 Duoxa1 protein_coding protein_coding MGP_NODShiLtJ_T0056973.1 MGP_NODShiLtJ_G0026229.1 mouse_genomes_project 2 138134094 138142418 - MGP_NODShiLtJ_P0056973 Duoxa1 protein_coding protein_coding MGP_NODShiLtJ_T0056974.1 MGP_NODShiLtJ_G0026229.1 mouse_genomes_project 2 138134473 138142425 - MGP_NODShiLtJ_P0056974 Duoxa1 protein_coding protein_coding MGP_NODShiLtJ_T0054340.1 MGP_NODShiLtJ_G0025552.1 mouse_genomes_project 2 46016932 46778547 + MGP_NODShiLtJ_P0054340 Arhgap15 protein_coding protein_coding MGP_NODShiLtJ_T0054341.1 MGP_NODShiLtJ_G0025552.1 mouse_genomes_project 2 46016942 46769613 + MGP_NODShiLtJ_P0054341 Arhgap15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054342.1 MGP_NODShiLtJ_G0025552.1 mouse_genomes_project 2 46016978 46769617 + MGP_NODShiLtJ_P0054342 Arhgap15 protein_coding protein_coding MGP_NODShiLtJ_T0054343.1 MGP_NODShiLtJ_G0025552.1 mouse_genomes_project 2 46420472 46503855 + Arhgap15 protein_coding processed_transcript MGP_NODShiLtJ_T0053697.1 MGP_NODShiLtJ_G0025430.1 mouse_genomes_project 2 32084146 32148178 + MGP_NODShiLtJ_P0053697 Lamc3 protein_coding protein_coding MGP_NODShiLtJ_T0053698.1 MGP_NODShiLtJ_G0025430.1 mouse_genomes_project 2 32084199 32149471 + MGP_NODShiLtJ_P0053698 Lamc3 protein_coding protein_coding MGP_NODShiLtJ_T0053699.1 MGP_NODShiLtJ_G0025430.1 mouse_genomes_project 2 32124766 32125405 + Lamc3 protein_coding processed_transcript MGP_NODShiLtJ_T0056589.1 MGP_NODShiLtJ_G0026162.1 mouse_genomes_project 2 135179477 135189066 - Oip5 protein_coding retained_intron MGP_NODShiLtJ_T0056590.1 MGP_NODShiLtJ_G0026162.1 mouse_genomes_project 2 135179922 135189066 - MGP_NODShiLtJ_P0056590 Oip5 protein_coding protein_coding MGP_NODShiLtJ_T0055274.1 MGP_NODShiLtJ_G0025727.1 mouse_genomes_project 2 91455603 91559174 + MGP_NODShiLtJ_P0055274 protein_coding protein_coding MGP_NODShiLtJ_T0055275.1 MGP_NODShiLtJ_G0025727.1 mouse_genomes_project 2 91462137 91479740 + MGP_NODShiLtJ_P0055275 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055276.1 MGP_NODShiLtJ_G0025727.1 mouse_genomes_project 2 91509482 91559174 + MGP_NODShiLtJ_P0055276 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099149.1 MGP_NODShiLtJ_G0037543.1 mouse_genomes_project 2 203013932 203014035 - Gm22708 snRNA snRNA MGP_NODShiLtJ_T0054085.1 MGP_NODShiLtJ_G0025486.1 mouse_genomes_project 2 35534767 35550910 - MGP_NODShiLtJ_P0054085 AI182371 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054086.1 MGP_NODShiLtJ_G0025486.1 mouse_genomes_project 2 35536332 35550942 - MGP_NODShiLtJ_P0054086 AI182371 protein_coding protein_coding MGP_NODShiLtJ_T0054087.1 MGP_NODShiLtJ_G0025486.1 mouse_genomes_project 2 35539235 35550941 - MGP_NODShiLtJ_P0054087 AI182371 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054088.1 MGP_NODShiLtJ_G0025486.1 mouse_genomes_project 2 35539576 35546373 - AI182371 protein_coding processed_transcript MGP_NODShiLtJ_T0054089.1 MGP_NODShiLtJ_G0025486.1 mouse_genomes_project 2 35542285 35551800 - AI182371 protein_coding processed_transcript MGP_NODShiLtJ_T0003909.1 MGP_NODShiLtJ_G0003484.1 mouse_genomes_project 2 39178484 39179444 - Gm27197 antisense antisense MGP_NODShiLtJ_T0001054.1 MGP_NODShiLtJ_G0000980.1 mouse_genomes_project 2 40092550 40096030 - TEC TEC MGP_NODShiLtJ_T0056368.1 MGP_NODShiLtJ_G0026107.1 mouse_genomes_project 2 127244028 127274451 + MGP_NODShiLtJ_P0056368 Emc7 protein_coding protein_coding MGP_NODShiLtJ_T0059409.1 MGP_NODShiLtJ_G0026808.1 mouse_genomes_project 2 201793207 201805454 - MGP_NODShiLtJ_P0059409 Rbbp8nl protein_coding protein_coding MGP_NODShiLtJ_T0010260.1 MGP_NODShiLtJ_G0008393.1 mouse_genomes_project 2 8361967 8362065 + Mir669m-2 miRNA miRNA MGP_NODShiLtJ_T0055574.1 MGP_NODShiLtJ_G0025897.1 mouse_genomes_project 2 99228663 99229590 - MGP_NODShiLtJ_P0055574 Olfr1208 protein_coding protein_coding MGP_NODShiLtJ_T0010304.1 MGP_NODShiLtJ_G0008437.1 mouse_genomes_project 2 33672869 33672922 - Gm25998 miRNA miRNA MGP_NODShiLtJ_T0100361.1 MGP_NODShiLtJ_G0038755.1 mouse_genomes_project 2 44862879 44863012 + Gm24350 snoRNA snoRNA MGP_NODShiLtJ_T0098302.1 MGP_NODShiLtJ_G0036708.1 mouse_genomes_project 2 4207982 4210523 - Gm10855 sense_intronic sense_intronic MGP_NODShiLtJ_T0055493.1 MGP_NODShiLtJ_G0025828.1 mouse_genomes_project 2 96748141 96749080 - MGP_NODShiLtJ_P0055493 Olfr1110 protein_coding protein_coding MGP_NODShiLtJ_T0013359.1 MGP_NODShiLtJ_G0011467.1 mouse_genomes_project 2 29472267 29472558 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059167.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189458951 189571837 - MGP_NODShiLtJ_P0059167 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0059168.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189458951 189582472 - MGP_NODShiLtJ_P0059168 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0059169.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189458951 189580757 - MGP_NODShiLtJ_P0059169 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0059170.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189458951 189580919 - MGP_NODShiLtJ_P0059170 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0059171.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189458976 189580921 - MGP_NODShiLtJ_P0059171 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0059172.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189486897 189495970 - Atp9a protein_coding processed_transcript MGP_NODShiLtJ_T0059173.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189492670 189580757 - Atp9a protein_coding retained_intron MGP_NODShiLtJ_T0059174.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189523786 189582714 - MGP_NODShiLtJ_P0059174 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0059175.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189523794 189582748 - MGP_NODShiLtJ_P0059175 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0059176.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189539796 189550266 - MGP_NODShiLtJ_P0059176 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0059177.1 MGP_NODShiLtJ_G0026746.1 mouse_genomes_project 2 189539863 189550315 - MGP_NODShiLtJ_P0059177 Atp9a protein_coding protein_coding MGP_NODShiLtJ_T0013516.1 MGP_NODShiLtJ_G0011624.1 mouse_genomes_project 2 92064316 92064526 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013438.1 MGP_NODShiLtJ_G0011546.1 mouse_genomes_project 2 63558710 63559192 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013323.1 MGP_NODShiLtJ_G0011431.1 mouse_genomes_project 2 16486888 16488039 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017729.1 MGP_NODShiLtJ_G0015341.1 mouse_genomes_project 2 147946595 147954311 + processed_transcript processed_transcript MGP_NODShiLtJ_T0059185.1 MGP_NODShiLtJ_G0026748.1 mouse_genomes_project 2 189763791 189833199 - MGP_NODShiLtJ_P0059185 Zfp64 protein_coding protein_coding MGP_NODShiLtJ_T0059186.1 MGP_NODShiLtJ_G0026748.1 mouse_genomes_project 2 189781605 189787369 - MGP_NODShiLtJ_P0059186 Zfp64 protein_coding protein_coding MGP_NODShiLtJ_T0059187.1 MGP_NODShiLtJ_G0026748.1 mouse_genomes_project 2 189802072 189832884 - MGP_NODShiLtJ_P0059187 Zfp64 protein_coding protein_coding MGP_NODShiLtJ_T0059188.1 MGP_NODShiLtJ_G0026748.1 mouse_genomes_project 2 189812650 189832901 - MGP_NODShiLtJ_P0059188 Zfp64 protein_coding protein_coding MGP_NODShiLtJ_T0059189.1 MGP_NODShiLtJ_G0026748.1 mouse_genomes_project 2 189828105 189832878 - Zfp64 protein_coding retained_intron MGP_NODShiLtJ_T0059228.1 MGP_NODShiLtJ_G0026762.1 mouse_genomes_project 2 193574582 193613671 + MGP_NODShiLtJ_P0059228 Cass4 protein_coding protein_coding MGP_NODShiLtJ_T0059229.1 MGP_NODShiLtJ_G0026762.1 mouse_genomes_project 2 193574609 193618700 + MGP_NODShiLtJ_P0059229 Cass4 protein_coding protein_coding MGP_NODShiLtJ_T0059230.1 MGP_NODShiLtJ_G0026762.1 mouse_genomes_project 2 193574688 193617803 + MGP_NODShiLtJ_P0059230 Cass4 protein_coding protein_coding MGP_NODShiLtJ_T0059231.1 MGP_NODShiLtJ_G0026762.1 mouse_genomes_project 2 193574758 193617586 + MGP_NODShiLtJ_P0059231 Cass4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054629.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66101182 66322781 - MGP_NODShiLtJ_P0054629 Rbms1 protein_coding protein_coding MGP_NODShiLtJ_T0054630.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66104160 66239742 - MGP_NODShiLtJ_P0054630 Rbms1 protein_coding protein_coding MGP_NODShiLtJ_T0054631.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66104911 66239774 - MGP_NODShiLtJ_P0054631 Rbms1 protein_coding protein_coding MGP_NODShiLtJ_T0054632.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66105696 66114457 - Rbms1 protein_coding processed_transcript MGP_NODShiLtJ_T0054633.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66107551 66133910 - Rbms1 protein_coding processed_transcript MGP_NODShiLtJ_T0054634.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66199651 66246350 - Rbms1 protein_coding processed_transcript MGP_NODShiLtJ_T0054635.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66199651 66247325 - Rbms1 protein_coding processed_transcript MGP_NODShiLtJ_T0054636.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66246506 66246803 - Rbms1 protein_coding processed_transcript MGP_NODShiLtJ_T0054637.1 MGP_NODShiLtJ_G0025600.1 mouse_genomes_project 2 66246718 66247291 - Rbms1 protein_coding processed_transcript MGP_NODShiLtJ_T0017659.1 MGP_NODShiLtJ_G0015310.1 mouse_genomes_project 2 101891784 101902316 - Gm13778 processed_transcript processed_transcript MGP_NODShiLtJ_T0017660.1 MGP_NODShiLtJ_G0015310.1 mouse_genomes_project 2 101892087 101902331 - Gm13778 processed_transcript processed_transcript MGP_NODShiLtJ_T0001069.1 MGP_NODShiLtJ_G0000995.1 mouse_genomes_project 2 143665580 143666190 - TEC TEC MGP_NODShiLtJ_T0001070.1 MGP_NODShiLtJ_G0000995.1 mouse_genomes_project 2 143665844 143666168 - TEC TEC MGP_NODShiLtJ_T0101813.1 MGP_NODShiLtJ_G0039981.1 mouse_genomes_project 2 95855174 95856116 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0055827.1 MGP_NODShiLtJ_G0025977.1 mouse_genomes_project 2 102568963 102575129 - MGP_NODShiLtJ_P0055827 Zfp408 protein_coding protein_coding MGP_NODShiLtJ_T0055828.1 MGP_NODShiLtJ_G0025977.1 mouse_genomes_project 2 102568983 102575141 - MGP_NODShiLtJ_P0055828 Zfp408 protein_coding protein_coding MGP_NODShiLtJ_T0055829.1 MGP_NODShiLtJ_G0025977.1 mouse_genomes_project 2 102571585 102573543 - Zfp408 protein_coding retained_intron MGP_NODShiLtJ_T0055830.1 MGP_NODShiLtJ_G0025977.1 mouse_genomes_project 2 102572975 102575109 - MGP_NODShiLtJ_P0055830 Zfp408 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055831.1 MGP_NODShiLtJ_G0025977.1 mouse_genomes_project 2 102573323 102575093 - Zfp408 protein_coding processed_transcript MGP_NODShiLtJ_T0055832.1 MGP_NODShiLtJ_G0025977.1 mouse_genomes_project 2 102574285 102575110 - Zfp408 protein_coding processed_transcript MGP_NODShiLtJ_T0013728.1 MGP_NODShiLtJ_G0011836.1 mouse_genomes_project 2 178180365 178180676 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017635.1 MGP_NODShiLtJ_G0015292.1 mouse_genomes_project 2 64607305 64611486 - 5330411J11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017636.1 MGP_NODShiLtJ_G0015292.1 mouse_genomes_project 2 64608596 64612275 - 5330411J11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0013315.1 MGP_NODShiLtJ_G0011423.1 mouse_genomes_project 2 13409748 13410832 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055463.1 MGP_NODShiLtJ_G0025798.1 mouse_genomes_project 2 95510467 95511406 - MGP_NODShiLtJ_P0055463 Olfr1054 protein_coding protein_coding MGP_NODShiLtJ_T0059038.1 MGP_NODShiLtJ_G0026720.1 mouse_genomes_project 2 187141335 187295752 - MGP_NODShiLtJ_P0059038 Prex1 protein_coding protein_coding MGP_NODShiLtJ_T0059039.1 MGP_NODShiLtJ_G0026720.1 mouse_genomes_project 2 187141963 187157214 - MGP_NODShiLtJ_P0059039 Prex1 protein_coding protein_coding MGP_NODShiLtJ_T0059040.1 MGP_NODShiLtJ_G0026720.1 mouse_genomes_project 2 187143314 187147975 - Prex1 protein_coding processed_transcript MGP_NODShiLtJ_T0059041.1 MGP_NODShiLtJ_G0026720.1 mouse_genomes_project 2 187175014 187178424 - Prex1 protein_coding retained_intron MGP_NODShiLtJ_T0059042.1 MGP_NODShiLtJ_G0026720.1 mouse_genomes_project 2 187209852 187284426 - Prex1 protein_coding processed_transcript MGP_NODShiLtJ_T0059043.1 MGP_NODShiLtJ_G0026720.1 mouse_genomes_project 2 187220832 187295825 - Prex1 protein_coding retained_intron MGP_NODShiLtJ_T0059044.1 MGP_NODShiLtJ_G0026720.1 mouse_genomes_project 2 187221045 187295636 - Prex1 protein_coding retained_intron MGP_NODShiLtJ_T0056814.1 MGP_NODShiLtJ_G0026199.1 mouse_genomes_project 2 136869328 136879675 - MGP_NODShiLtJ_P0056814 Zscan29 protein_coding protein_coding MGP_NODShiLtJ_T0056815.1 MGP_NODShiLtJ_G0026199.1 mouse_genomes_project 2 136869328 136878674 - MGP_NODShiLtJ_P0056815 Zscan29 protein_coding protein_coding MGP_NODShiLtJ_T0056816.1 MGP_NODShiLtJ_G0026199.1 mouse_genomes_project 2 136870114 136873065 - Zscan29 protein_coding retained_intron MGP_NODShiLtJ_T0013444.1 MGP_NODShiLtJ_G0011552.1 mouse_genomes_project 2 64624116 64626043 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053298.1 MGP_NODShiLtJ_G0025373.1 mouse_genomes_project 2 28864084 29006896 - MGP_NODShiLtJ_P0053298 Cfap77 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053299.1 MGP_NODShiLtJ_G0025373.1 mouse_genomes_project 2 28864088 29006911 - MGP_NODShiLtJ_P0053299 Cfap77 protein_coding protein_coding MGP_NODShiLtJ_T0053300.1 MGP_NODShiLtJ_G0025373.1 mouse_genomes_project 2 28864880 28985191 - Cfap77 protein_coding processed_transcript MGP_NODShiLtJ_T0053301.1 MGP_NODShiLtJ_G0025373.1 mouse_genomes_project 2 28894466 29006938 - MGP_NODShiLtJ_P0053301 Cfap77 protein_coding protein_coding MGP_NODShiLtJ_T0053302.1 MGP_NODShiLtJ_G0025373.1 mouse_genomes_project 2 29003768 29006931 - Cfap77 protein_coding processed_transcript MGP_NODShiLtJ_T0057664.1 MGP_NODShiLtJ_G0026389.1 mouse_genomes_project 2 158466297 158487199 - Flrt3 protein_coding processed_transcript MGP_NODShiLtJ_T0057665.1 MGP_NODShiLtJ_G0026389.1 mouse_genomes_project 2 158473612 158487218 - MGP_NODShiLtJ_P0057665 Flrt3 protein_coding protein_coding MGP_NODShiLtJ_T0057666.1 MGP_NODShiLtJ_G0026389.1 mouse_genomes_project 2 158474736 158487149 - MGP_NODShiLtJ_P0057666 Flrt3 protein_coding protein_coding MGP_NODShiLtJ_T0053525.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445177 30453453 + MGP_NODShiLtJ_P0053525 Dolpp1 protein_coding protein_coding MGP_NODShiLtJ_T0053526.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445339 30453451 + MGP_NODShiLtJ_P0053526 Dolpp1 protein_coding protein_coding MGP_NODShiLtJ_T0053527.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445339 30453451 + MGP_NODShiLtJ_P0053527 Dolpp1 protein_coding protein_coding MGP_NODShiLtJ_T0053528.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445351 30450239 + Dolpp1 protein_coding retained_intron MGP_NODShiLtJ_T0053529.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445353 30448835 + Dolpp1 protein_coding retained_intron MGP_NODShiLtJ_T0053530.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445362 30453452 + MGP_NODShiLtJ_P0053530 Dolpp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053531.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445363 30449080 + Dolpp1 protein_coding retained_intron MGP_NODShiLtJ_T0053532.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445368 30452608 + MGP_NODShiLtJ_P0053532 Dolpp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053533.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30445377 30450737 + Dolpp1 protein_coding retained_intron MGP_NODShiLtJ_T0053534.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30448521 30453451 + Dolpp1 protein_coding processed_transcript MGP_NODShiLtJ_T0053535.1 MGP_NODShiLtJ_G0025405.1 mouse_genomes_project 2 30450344 30452912 + Dolpp1 protein_coding processed_transcript MGP_NODShiLtJ_T0056565.1 MGP_NODShiLtJ_G0026153.1 mouse_genomes_project 2 134754240 134767153 - MGP_NODShiLtJ_P0056565 Ppp1r14d protein_coding protein_coding MGP_NODShiLtJ_T0056566.1 MGP_NODShiLtJ_G0026153.1 mouse_genomes_project 2 134754261 134767112 - MGP_NODShiLtJ_P0056566 Ppp1r14d protein_coding protein_coding MGP_NODShiLtJ_T0013392.1 MGP_NODShiLtJ_G0011500.1 mouse_genomes_project 2 40608221 40608341 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004133.1 MGP_NODShiLtJ_G0003644.1 mouse_genomes_project 2 195641710 195656662 - Nespas antisense antisense MGP_NODShiLtJ_T0004134.1 MGP_NODShiLtJ_G0003644.1 mouse_genomes_project 2 195642667 195656615 - Nespas antisense antisense MGP_NODShiLtJ_T0004135.1 MGP_NODShiLtJ_G0003644.1 mouse_genomes_project 2 195644828 195645911 - Nespas antisense antisense MGP_NODShiLtJ_T0058494.1 MGP_NODShiLtJ_G0026591.1 mouse_genomes_project 2 176482205 176499176 - MGP_NODShiLtJ_P0058494 Sla2 protein_coding protein_coding MGP_NODShiLtJ_T0058496.1 MGP_NODShiLtJ_G0026591.1 mouse_genomes_project 2 176482670 176499290 - MGP_NODShiLtJ_P0058496 Sla2 protein_coding protein_coding MGP_NODShiLtJ_T0004118.1 MGP_NODShiLtJ_G0003633.1 mouse_genomes_project 2 188776760 188777738 + Gm14236 antisense antisense MGP_NODShiLtJ_T0003931.1 MGP_NODShiLtJ_G0003500.1 mouse_genomes_project 2 71428628 71429548 + Gm13594 antisense antisense MGP_NODShiLtJ_T0056999.1 MGP_NODShiLtJ_G0026237.1 mouse_genomes_project 2 138689384 138700711 + MGP_NODShiLtJ_P0056999 Bloc1s6 protein_coding protein_coding MGP_NODShiLtJ_T0057000.1 MGP_NODShiLtJ_G0026237.1 mouse_genomes_project 2 138689394 138697213 + Bloc1s6 protein_coding processed_transcript MGP_NODShiLtJ_T0057001.1 MGP_NODShiLtJ_G0026237.1 mouse_genomes_project 2 138689400 138699334 + Bloc1s6 protein_coding processed_transcript MGP_NODShiLtJ_T0057002.1 MGP_NODShiLtJ_G0026237.1 mouse_genomes_project 2 138689408 138690038 + Bloc1s6 protein_coding processed_transcript MGP_NODShiLtJ_T0057003.1 MGP_NODShiLtJ_G0026237.1 mouse_genomes_project 2 138689411 138697279 + Bloc1s6 protein_coding processed_transcript MGP_NODShiLtJ_T0057004.1 MGP_NODShiLtJ_G0026237.1 mouse_genomes_project 2 138689440 138698239 + Bloc1s6 protein_coding processed_transcript MGP_NODShiLtJ_T0056520.1 MGP_NODShiLtJ_G0026142.1 mouse_genomes_project 2 134410536 134427992 + MGP_NODShiLtJ_P0056520 Bahd1 protein_coding protein_coding MGP_NODShiLtJ_T0056521.1 MGP_NODShiLtJ_G0026142.1 mouse_genomes_project 2 134412991 134437454 + MGP_NODShiLtJ_P0056521 Bahd1 protein_coding protein_coding MGP_NODShiLtJ_T0056522.1 MGP_NODShiLtJ_G0026142.1 mouse_genomes_project 2 134413154 134437445 + MGP_NODShiLtJ_P0056522 Bahd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054691.1 MGP_NODShiLtJ_G0025609.1 mouse_genomes_project 2 68321072 68355287 + MGP_NODShiLtJ_P0054691 Gca protein_coding protein_coding MGP_NODShiLtJ_T0054692.1 MGP_NODShiLtJ_G0025609.1 mouse_genomes_project 2 68345185 68350135 + Gca protein_coding processed_transcript MGP_NODShiLtJ_T0056100.1 MGP_NODShiLtJ_G0026026.1 mouse_genomes_project 2 116414074 116453855 - MGP_NODShiLtJ_P0056100 Ehf protein_coding protein_coding MGP_NODShiLtJ_T0056101.1 MGP_NODShiLtJ_G0026026.1 mouse_genomes_project 2 116414666 116453743 - MGP_NODShiLtJ_P0056101 Ehf protein_coding protein_coding MGP_NODShiLtJ_T0056102.1 MGP_NODShiLtJ_G0026026.1 mouse_genomes_project 2 116417154 116434347 - MGP_NODShiLtJ_P0056102 Ehf protein_coding protein_coding MGP_NODShiLtJ_T0056103.1 MGP_NODShiLtJ_G0026026.1 mouse_genomes_project 2 116417351 116424895 - Ehf protein_coding retained_intron MGP_NODShiLtJ_T0056104.1 MGP_NODShiLtJ_G0026026.1 mouse_genomes_project 2 116417719 116450140 - MGP_NODShiLtJ_P0056104 Ehf protein_coding protein_coding MGP_NODShiLtJ_T0056105.1 MGP_NODShiLtJ_G0026026.1 mouse_genomes_project 2 116424746 116441532 - MGP_NODShiLtJ_P0056105 Ehf protein_coding protein_coding MGP_NODShiLtJ_T0056106.1 MGP_NODShiLtJ_G0026026.1 mouse_genomes_project 2 116427436 116453497 - MGP_NODShiLtJ_P0056106 Ehf protein_coding protein_coding MGP_NODShiLtJ_T0056107.1 MGP_NODShiLtJ_G0026026.1 mouse_genomes_project 2 116429741 116453744 - Ehf protein_coding retained_intron MGP_NODShiLtJ_T0013688.1 MGP_NODShiLtJ_G0011796.1 mouse_genomes_project 2 165937584 165937893 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101315.1 MGP_NODShiLtJ_G0039568.1 mouse_genomes_project 2 39515363 39532746 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101827.1 MGP_NODShiLtJ_G0039995.1 mouse_genomes_project 2 98673957 98674869 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013494.1 MGP_NODShiLtJ_G0011602.1 mouse_genomes_project 2 84777918 84779364 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057811.1 MGP_NODShiLtJ_G0026422.1 mouse_genomes_project 2 166621262 166624333 - MGP_NODShiLtJ_P0057811 Foxa2 protein_coding protein_coding MGP_NODShiLtJ_T0057812.1 MGP_NODShiLtJ_G0026422.1 mouse_genomes_project 2 166621262 166625452 - MGP_NODShiLtJ_P0057812 Foxa2 protein_coding protein_coding MGP_NODShiLtJ_T0057813.1 MGP_NODShiLtJ_G0026422.1 mouse_genomes_project 2 166621927 166625379 - MGP_NODShiLtJ_P0057813 Foxa2 protein_coding protein_coding MGP_NODShiLtJ_T0057814.1 MGP_NODShiLtJ_G0026422.1 mouse_genomes_project 2 166622625 166623849 - Foxa2 protein_coding processed_transcript MGP_NODShiLtJ_T0058248.1 MGP_NODShiLtJ_G0026555.1 mouse_genomes_project 2 175013641 175039755 - MGP_NODShiLtJ_P0058248 Ggt7 protein_coding protein_coding MGP_NODShiLtJ_T0058249.1 MGP_NODShiLtJ_G0026555.1 mouse_genomes_project 2 175018223 175022659 - Ggt7 protein_coding retained_intron MGP_NODShiLtJ_T0058250.1 MGP_NODShiLtJ_G0026555.1 mouse_genomes_project 2 175019292 175027192 - Ggt7 protein_coding retained_intron MGP_NODShiLtJ_T0058251.1 MGP_NODShiLtJ_G0026555.1 mouse_genomes_project 2 175024259 175030995 - MGP_NODShiLtJ_P0058251 Ggt7 protein_coding protein_coding MGP_NODShiLtJ_T0058252.1 MGP_NODShiLtJ_G0026555.1 mouse_genomes_project 2 175028820 175043654 - MGP_NODShiLtJ_P0058252 Ggt7 protein_coding protein_coding MGP_NODShiLtJ_T0013713.1 MGP_NODShiLtJ_G0011821.1 mouse_genomes_project 2 175069881 175070172 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052563.1 MGP_NODShiLtJ_G0025235.1 mouse_genomes_project 2 22397912 22447576 + MGP_NODShiLtJ_P0052563 Yme1l1 protein_coding protein_coding MGP_NODShiLtJ_T0052564.1 MGP_NODShiLtJ_G0025235.1 mouse_genomes_project 2 22398061 22418662 + Yme1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0052565.1 MGP_NODShiLtJ_G0025235.1 mouse_genomes_project 2 22398071 22402191 + Yme1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0052566.1 MGP_NODShiLtJ_G0025235.1 mouse_genomes_project 2 22398242 22445469 + MGP_NODShiLtJ_P0052566 Yme1l1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052567.1 MGP_NODShiLtJ_G0025235.1 mouse_genomes_project 2 22398376 22406172 + Yme1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0052568.1 MGP_NODShiLtJ_G0025235.1 mouse_genomes_project 2 22409967 22415190 + Yme1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0052569.1 MGP_NODShiLtJ_G0025235.1 mouse_genomes_project 2 22440133 22442370 + Yme1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0057349.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 146980905 146997879 + Vps16 protein_coding retained_intron MGP_NODShiLtJ_T0057350.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 146980931 147003695 + MGP_NODShiLtJ_P0057350 Vps16 protein_coding protein_coding MGP_NODShiLtJ_T0057351.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 146980931 146999343 + MGP_NODShiLtJ_P0057351 Vps16 protein_coding protein_coding MGP_NODShiLtJ_T0057352.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 146980970 146999722 + Vps16 protein_coding processed_transcript MGP_NODShiLtJ_T0057353.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 146997061 146998493 + Vps16 protein_coding retained_intron MGP_NODShiLtJ_T0057354.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 146999055 147001131 + Vps16 protein_coding retained_intron MGP_NODShiLtJ_T0057355.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 146999747 147000733 + Vps16 protein_coding retained_intron MGP_NODShiLtJ_T0057356.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 147001033 147002825 + Vps16 protein_coding retained_intron MGP_NODShiLtJ_T0057357.1 MGP_NODShiLtJ_G0026322.1 mouse_genomes_project 2 147002592 147003160 + Vps16 protein_coding retained_intron MGP_NODShiLtJ_T0054601.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65508782 65549762 + MGP_NODShiLtJ_P0054601 March7 protein_coding protein_coding MGP_NODShiLtJ_T0054602.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65508808 65551227 + March7 protein_coding processed_transcript MGP_NODShiLtJ_T0054603.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65508968 65547998 + MGP_NODShiLtJ_P0054603 March7 protein_coding protein_coding MGP_NODShiLtJ_T0054604.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65523603 65547982 + MGP_NODShiLtJ_P0054604 March7 protein_coding protein_coding MGP_NODShiLtJ_T0054605.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65531734 65534530 + March7 protein_coding processed_transcript MGP_NODShiLtJ_T0054606.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65536746 65547982 + MGP_NODShiLtJ_P0054606 March7 protein_coding protein_coding MGP_NODShiLtJ_T0054607.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65536880 65543126 + March7 protein_coding processed_transcript MGP_NODShiLtJ_T0054608.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65543061 65547980 + March7 protein_coding processed_transcript MGP_NODShiLtJ_T0054609.1 MGP_NODShiLtJ_G0025595.1 mouse_genomes_project 2 65547367 65547982 + March7 protein_coding processed_transcript MGP_NODShiLtJ_T0003883.1 MGP_NODShiLtJ_G0003462.1 mouse_genomes_project 2 29322605 29370100 - Gm13402 antisense antisense MGP_NODShiLtJ_T0056204.1 MGP_NODShiLtJ_G0026047.1 mouse_genomes_project 2 118174439 118276526 + MGP_NODShiLtJ_P0056204 Ccdc73 protein_coding protein_coding MGP_NODShiLtJ_T0056205.1 MGP_NODShiLtJ_G0026047.1 mouse_genomes_project 2 118193563 118335057 + MGP_NODShiLtJ_P0056205 Ccdc73 protein_coding protein_coding MGP_NODShiLtJ_T0056206.1 MGP_NODShiLtJ_G0026047.1 mouse_genomes_project 2 118215680 118324215 + MGP_NODShiLtJ_P0056206 Ccdc73 protein_coding protein_coding MGP_NODShiLtJ_T0056207.1 MGP_NODShiLtJ_G0026047.1 mouse_genomes_project 2 118327658 118355555 + MGP_NODShiLtJ_P0056207 Ccdc73 protein_coding protein_coding MGP_NODShiLtJ_T0056212.1 MGP_NODShiLtJ_G0026047.1 mouse_genomes_project 2 118354823 118355608 + Ccdc73 protein_coding processed_transcript MGP_NODShiLtJ_T0013690.1 MGP_NODShiLtJ_G0011798.1 mouse_genomes_project 2 166225784 166226222 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057443.1 MGP_NODShiLtJ_G0026341.1 mouse_genomes_project 2 147805921 147808912 - MGP_NODShiLtJ_P0057443 Spef1 protein_coding protein_coding MGP_NODShiLtJ_T0059027.1 MGP_NODShiLtJ_G0026718.1 mouse_genomes_project 2 186504466 186586523 + MGP_NODShiLtJ_P0059027 Ncoa3 protein_coding protein_coding MGP_NODShiLtJ_T0059028.1 MGP_NODShiLtJ_G0026718.1 mouse_genomes_project 2 186504467 186590416 + MGP_NODShiLtJ_P0059028 Ncoa3 protein_coding protein_coding MGP_NODShiLtJ_T0059029.1 MGP_NODShiLtJ_G0026718.1 mouse_genomes_project 2 186562782 186567240 + Ncoa3 protein_coding processed_transcript MGP_NODShiLtJ_T0059030.1 MGP_NODShiLtJ_G0026718.1 mouse_genomes_project 2 186575718 186581278 + Ncoa3 protein_coding retained_intron MGP_NODShiLtJ_T0059031.1 MGP_NODShiLtJ_G0026718.1 mouse_genomes_project 2 186582514 186585256 + Ncoa3 protein_coding retained_intron MGP_NODShiLtJ_T0058514.1 MGP_NODShiLtJ_G0026594.1 mouse_genomes_project 2 176653369 176719464 - MGP_NODShiLtJ_P0058514 Soga1 protein_coding protein_coding MGP_NODShiLtJ_T0058515.1 MGP_NODShiLtJ_G0026594.1 mouse_genomes_project 2 176658428 176665040 - Soga1 protein_coding processed_transcript MGP_NODShiLtJ_T0058516.1 MGP_NODShiLtJ_G0026594.1 mouse_genomes_project 2 176676460 176679654 - Soga1 protein_coding processed_transcript MGP_NODShiLtJ_T0057853.1 MGP_NODShiLtJ_G0026441.1 mouse_genomes_project 2 168998703 169027812 - MGP_NODShiLtJ_P0057853 Zfp120 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057854.1 MGP_NODShiLtJ_G0026441.1 mouse_genomes_project 2 168998703 169027842 - MGP_NODShiLtJ_P0057854 Zfp120 protein_coding protein_coding MGP_NODShiLtJ_T0057855.1 MGP_NODShiLtJ_G0026441.1 mouse_genomes_project 2 168998703 169027812 - MGP_NODShiLtJ_P0057855 Zfp120 protein_coding protein_coding MGP_NODShiLtJ_T0057856.1 MGP_NODShiLtJ_G0026441.1 mouse_genomes_project 2 169003948 169027790 - Zfp120 protein_coding processed_transcript MGP_NODShiLtJ_T0052724.1 MGP_NODShiLtJ_G0025263.1 mouse_genomes_project 2 24857556 24861049 + MGP_NODShiLtJ_P0052724 Fam166a protein_coding protein_coding MGP_NODShiLtJ_T0052725.1 MGP_NODShiLtJ_G0025263.1 mouse_genomes_project 2 24860169 24861049 + Fam166a protein_coding processed_transcript MGP_NODShiLtJ_T0059218.1 MGP_NODShiLtJ_G0026756.1 mouse_genomes_project 2 191774612 191931054 + MGP_NODShiLtJ_P0059218 Dok5 protein_coding protein_coding MGP_NODShiLtJ_T0013460.1 MGP_NODShiLtJ_G0011568.1 mouse_genomes_project 2 72772471 72772843 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010281.1 MGP_NODShiLtJ_G0008414.1 mouse_genomes_project 2 25101049 25101105 + Mir3087 miRNA miRNA MGP_NODShiLtJ_T0055643.1 MGP_NODShiLtJ_G0025953.1 mouse_genomes_project 2 101226324 101227445 - Ptprj protein_coding processed_transcript MGP_NODShiLtJ_T0055644.1 MGP_NODShiLtJ_G0025953.1 mouse_genomes_project 2 101226326 101279816 - MGP_NODShiLtJ_P0055644 Ptprj protein_coding protein_coding MGP_NODShiLtJ_T0055645.1 MGP_NODShiLtJ_G0025953.1 mouse_genomes_project 2 101230202 101271994 - MGP_NODShiLtJ_P0055645 Ptprj protein_coding protein_coding MGP_NODShiLtJ_T0055646.1 MGP_NODShiLtJ_G0025953.1 mouse_genomes_project 2 101230202 101391482 - MGP_NODShiLtJ_P0055646 Ptprj protein_coding protein_coding MGP_NODShiLtJ_T0013633.1 MGP_NODShiLtJ_G0011741.1 mouse_genomes_project 2 143975512 143976362 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056483.1 MGP_NODShiLtJ_G0026134.1 mouse_genomes_project 2 134160867 134196826 + MGP_NODShiLtJ_P0056483 Pak6 protein_coding protein_coding MGP_NODShiLtJ_T0056484.1 MGP_NODShiLtJ_G0026134.1 mouse_genomes_project 2 134161326 134162518 + Pak6 protein_coding retained_intron MGP_NODShiLtJ_T0056485.1 MGP_NODShiLtJ_G0026134.1 mouse_genomes_project 2 134161628 134175744 + Pak6 protein_coding processed_transcript MGP_NODShiLtJ_T0056486.1 MGP_NODShiLtJ_G0026134.1 mouse_genomes_project 2 134175202 134196824 + MGP_NODShiLtJ_P0056486 Pak6 protein_coding protein_coding MGP_NODShiLtJ_T0056487.1 MGP_NODShiLtJ_G0026134.1 mouse_genomes_project 2 134175236 134196029 + Pak6 protein_coding retained_intron MGP_NODShiLtJ_T0010253.1 MGP_NODShiLtJ_G0008386.1 mouse_genomes_project 2 8358544 8358647 + Gm22239 miRNA miRNA MGP_NODShiLtJ_T0017764.1 MGP_NODShiLtJ_G0015356.1 mouse_genomes_project 2 181577231 181577554 - Gm29229 processed_transcript processed_transcript MGP_NODShiLtJ_T0053749.1 MGP_NODShiLtJ_G0025437.1 mouse_genomes_project 2 32480966 32488242 - MGP_NODShiLtJ_P0053749 Uck1 protein_coding protein_coding MGP_NODShiLtJ_T0053750.1 MGP_NODShiLtJ_G0025437.1 mouse_genomes_project 2 32481245 32484752 - Uck1 protein_coding retained_intron MGP_NODShiLtJ_T0053751.1 MGP_NODShiLtJ_G0025437.1 mouse_genomes_project 2 32484351 32487727 - MGP_NODShiLtJ_P0053751 Uck1 protein_coding protein_coding MGP_NODShiLtJ_T0053752.1 MGP_NODShiLtJ_G0025437.1 mouse_genomes_project 2 32485929 32487716 - Uck1 protein_coding retained_intron MGP_NODShiLtJ_T0053753.1 MGP_NODShiLtJ_G0025437.1 mouse_genomes_project 2 32486178 32488144 - Uck1 protein_coding retained_intron MGP_NODShiLtJ_T0017610.1 MGP_NODShiLtJ_G0015277.1 mouse_genomes_project 2 29212127 29220014 - 6530402F18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017611.1 MGP_NODShiLtJ_G0015277.1 mouse_genomes_project 2 29217930 29220027 - 6530402F18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0010378.1 MGP_NODShiLtJ_G0008511.1 mouse_genomes_project 2 188377788 188377884 - Gm22355 miRNA miRNA MGP_NODShiLtJ_T0007318.1 MGP_NODShiLtJ_G0005991.1 mouse_genomes_project 2 179813101 179851055 - Gm14223 lincRNA lincRNA MGP_NODShiLtJ_T0055484.1 MGP_NODShiLtJ_G0025819.1 mouse_genomes_project 2 96498841 96499807 - MGP_NODShiLtJ_P0055484 Olfr1100 protein_coding protein_coding MGP_NODShiLtJ_T0053098.1 MGP_NODShiLtJ_G0025332.1 mouse_genomes_project 2 26377520 26385561 + MGP_NODShiLtJ_P0053098 Fam69b protein_coding protein_coding MGP_NODShiLtJ_T0053099.1 MGP_NODShiLtJ_G0025332.1 mouse_genomes_project 2 26377557 26382071 + Fam69b protein_coding processed_transcript MGP_NODShiLtJ_T0053100.1 MGP_NODShiLtJ_G0025332.1 mouse_genomes_project 2 26383266 26384089 + Fam69b protein_coding processed_transcript MGP_NODShiLtJ_T0059328.1 MGP_NODShiLtJ_G0026789.1 mouse_genomes_project 2 196047012 196117120 + MGP_NODShiLtJ_P0059328 Zfp831 protein_coding protein_coding MGP_NODShiLtJ_T0057054.1 MGP_NODShiLtJ_G0026249.1 mouse_genomes_project 2 141920017 141921708 + MGP_NODShiLtJ_P0057054 Eid1 protein_coding protein_coding MGP_NODShiLtJ_T0056499.1 MGP_NODShiLtJ_G0026139.1 mouse_genomes_project 2 134282395 134317664 + MGP_NODShiLtJ_P0056499 Disp2 protein_coding protein_coding MGP_NODShiLtJ_T0056500.1 MGP_NODShiLtJ_G0026139.1 mouse_genomes_project 2 134282398 134299948 + MGP_NODShiLtJ_P0056500 Disp2 protein_coding protein_coding MGP_NODShiLtJ_T0056501.1 MGP_NODShiLtJ_G0026139.1 mouse_genomes_project 2 134282415 134317783 + MGP_NODShiLtJ_P0056501 Disp2 protein_coding protein_coding MGP_NODShiLtJ_T0056502.1 MGP_NODShiLtJ_G0026139.1 mouse_genomes_project 2 134282418 134294819 + MGP_NODShiLtJ_P0056502 Disp2 protein_coding protein_coding MGP_NODShiLtJ_T0056503.1 MGP_NODShiLtJ_G0026139.1 mouse_genomes_project 2 134282435 134294818 + Disp2 protein_coding retained_intron MGP_NODShiLtJ_T0010303.1 MGP_NODShiLtJ_G0008436.1 mouse_genomes_project 2 32989859 32989932 - Mir3960 miRNA miRNA MGP_NODShiLtJ_T0056921.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137293153 137581038 - MGP_NODShiLtJ_P0056921 Frmd5 protein_coding protein_coding MGP_NODShiLtJ_T0056922.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137293153 137534607 - MGP_NODShiLtJ_P0056922 Frmd5 protein_coding protein_coding MGP_NODShiLtJ_T0056923.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137293153 137335582 - MGP_NODShiLtJ_P0056923 Frmd5 protein_coding protein_coding MGP_NODShiLtJ_T0056924.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137295362 137303143 - MGP_NODShiLtJ_P0056924 Frmd5 protein_coding protein_coding MGP_NODShiLtJ_T0056925.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137295920 137534607 - MGP_NODShiLtJ_P0056925 Frmd5 protein_coding protein_coding MGP_NODShiLtJ_T0056926.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137295922 137580974 - MGP_NODShiLtJ_P0056926 Frmd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056927.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137295923 137580943 - MGP_NODShiLtJ_P0056927 Frmd5 protein_coding protein_coding MGP_NODShiLtJ_T0056928.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137296271 137580782 - MGP_NODShiLtJ_P0056928 Frmd5 protein_coding protein_coding MGP_NODShiLtJ_T0056929.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137296664 137306148 - Frmd5 protein_coding processed_transcript MGP_NODShiLtJ_T0056930.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137308772 137581008 - Frmd5 protein_coding retained_intron MGP_NODShiLtJ_T0056931.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137316327 137580823 - MGP_NODShiLtJ_P0056931 Frmd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056932.1 MGP_NODShiLtJ_G0026215.1 mouse_genomes_project 2 137316379 137333154 - Frmd5 protein_coding processed_transcript MGP_NODShiLtJ_T0058717.1 MGP_NODShiLtJ_G0026635.1 mouse_genomes_project 2 183165295 183194618 + MGP_NODShiLtJ_P0058717 Sgk2 protein_coding protein_coding MGP_NODShiLtJ_T0058718.1 MGP_NODShiLtJ_G0026635.1 mouse_genomes_project 2 183165467 183194617 + MGP_NODShiLtJ_P0058718 Sgk2 protein_coding protein_coding MGP_NODShiLtJ_T0058719.1 MGP_NODShiLtJ_G0026635.1 mouse_genomes_project 2 183176481 183185203 + Sgk2 protein_coding retained_intron MGP_NODShiLtJ_T0058332.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175528198 175565228 - MGP_NODShiLtJ_P0058332 6430550D23Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058337.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175557754 175561769 - MGP_NODShiLtJ_P0058337 6430550D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0058338.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175557921 175565244 - 6430550D23Rik protein_coding retained_intron MGP_NODShiLtJ_T0058339.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175559800 175565243 - MGP_NODShiLtJ_P0058339 6430550D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0058340.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175560484 175565240 - MGP_NODShiLtJ_P0058340 6430550D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0058341.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175560577 175565298 - MGP_NODShiLtJ_P0058341 6430550D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0058342.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175560664 175561769 - MGP_NODShiLtJ_P0058342 6430550D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0058343.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175560707 175561478 - MGP_NODShiLtJ_P0058343 6430550D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0058344.1 MGP_NODShiLtJ_G0026571.1 mouse_genomes_project 2 175560739 175561478 - MGP_NODShiLtJ_P0058344 6430550D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0100348.1 MGP_NODShiLtJ_G0038742.1 mouse_genomes_project 2 26388249 26388381 - Snora17 snoRNA snoRNA MGP_NODShiLtJ_T0052342.1 MGP_NODShiLtJ_G0025196.1 mouse_genomes_project 2 11824151 11975481 - MGP_NODShiLtJ_P0052342 St8sia6 protein_coding protein_coding MGP_NODShiLtJ_T0052343.1 MGP_NODShiLtJ_G0025196.1 mouse_genomes_project 2 11831182 11974710 - St8sia6 protein_coding processed_transcript MGP_NODShiLtJ_T0057525.1 MGP_NODShiLtJ_G0026358.1 mouse_genomes_project 2 148990833 149023342 + MGP_NODShiLtJ_P0057525 Cds2 protein_coding protein_coding MGP_NODShiLtJ_T0057526.1 MGP_NODShiLtJ_G0026358.1 mouse_genomes_project 2 148990932 149024442 + MGP_NODShiLtJ_P0057526 Cds2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057527.1 MGP_NODShiLtJ_G0026358.1 mouse_genomes_project 2 148991135 149032423 + MGP_NODShiLtJ_P0057527 Cds2 protein_coding protein_coding MGP_NODShiLtJ_T0057528.1 MGP_NODShiLtJ_G0026358.1 mouse_genomes_project 2 149013382 149022770 + MGP_NODShiLtJ_P0057528 Cds2 protein_coding protein_coding MGP_NODShiLtJ_T0057529.1 MGP_NODShiLtJ_G0026358.1 mouse_genomes_project 2 149028462 149032466 + MGP_NODShiLtJ_P0057529 Cds2 protein_coding protein_coding MGP_NODShiLtJ_T0055485.1 MGP_NODShiLtJ_G0025820.1 mouse_genomes_project 2 96516357 96517290 - MGP_NODShiLtJ_P0055485 Olfr1101 protein_coding protein_coding MGP_NODShiLtJ_T0101841.1 MGP_NODShiLtJ_G0040009.1 mouse_genomes_project 2 138278913 138279189 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0055482.1 MGP_NODShiLtJ_G0025817.1 mouse_genomes_project 2 96310294 96312234 - MGP_NODShiLtJ_P0055482 protein_coding protein_coding MGP_NODShiLtJ_T0010257.1 MGP_NODShiLtJ_G0008390.1 mouse_genomes_project 2 8360050 8360146 + Mir466d miRNA miRNA MGP_NODShiLtJ_T0057992.1 MGP_NODShiLtJ_G0026484.1 mouse_genomes_project 2 171682647 171685834 + MGP_NODShiLtJ_P0057992 Defb28 protein_coding protein_coding MGP_NODShiLtJ_T0055428.1 MGP_NODShiLtJ_G0025764.1 mouse_genomes_project 2 94386970 94425599 - MGP_NODShiLtJ_P0055428 4833423E24Rik protein_coding protein_coding MGP_NODShiLtJ_T0054781.1 MGP_NODShiLtJ_G0025625.1 mouse_genomes_project 2 74824425 75122052 - MGP_NODShiLtJ_P0054781 Stk39 protein_coding protein_coding MGP_NODShiLtJ_T0054782.1 MGP_NODShiLtJ_G0025625.1 mouse_genomes_project 2 74824428 74997403 - Stk39 protein_coding retained_intron MGP_NODShiLtJ_T0054783.1 MGP_NODShiLtJ_G0025625.1 mouse_genomes_project 2 74825720 74838387 - Stk39 protein_coding processed_transcript MGP_NODShiLtJ_T0054784.1 MGP_NODShiLtJ_G0025625.1 mouse_genomes_project 2 74825720 74869656 - Stk39 protein_coding processed_transcript MGP_NODShiLtJ_T0054785.1 MGP_NODShiLtJ_G0025625.1 mouse_genomes_project 2 74825720 74869661 - Stk39 protein_coding processed_transcript MGP_NODShiLtJ_T0054786.1 MGP_NODShiLtJ_G0025625.1 mouse_genomes_project 2 74825726 74869634 - Stk39 protein_coding processed_transcript MGP_NODShiLtJ_T0054787.1 MGP_NODShiLtJ_G0025625.1 mouse_genomes_project 2 74889874 75121724 - Stk39 protein_coding retained_intron MGP_NODShiLtJ_T0054788.1 MGP_NODShiLtJ_G0025625.1 mouse_genomes_project 2 74989888 75022016 - Stk39 protein_coding processed_transcript MGP_NODShiLtJ_T0003850.1 MGP_NODShiLtJ_G0003438.1 mouse_genomes_project 2 16231267 16232206 + Gm13324 antisense antisense MGP_NODShiLtJ_T0013658.1 MGP_NODShiLtJ_G0011766.1 mouse_genomes_project 2 150002155 150002765 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013714.1 MGP_NODShiLtJ_G0011822.1 mouse_genomes_project 2 175073540 175074002 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058444.1 MGP_NODShiLtJ_G0026582.1 mouse_genomes_project 2 175885068 175885926 - MGP_NODShiLtJ_P0058444 Scand1 protein_coding protein_coding MGP_NODShiLtJ_T0057970.1 MGP_NODShiLtJ_G0026474.1 mouse_genomes_project 2 171450201 171456683 - Rbck1 protein_coding retained_intron MGP_NODShiLtJ_T0057971.1 MGP_NODShiLtJ_G0026474.1 mouse_genomes_project 2 171450201 171466109 - MGP_NODShiLtJ_P0057971 Rbck1 protein_coding protein_coding MGP_NODShiLtJ_T0057972.1 MGP_NODShiLtJ_G0026474.1 mouse_genomes_project 2 171450201 171466350 - MGP_NODShiLtJ_P0057972 Rbck1 protein_coding protein_coding MGP_NODShiLtJ_T0057973.1 MGP_NODShiLtJ_G0026474.1 mouse_genomes_project 2 171452029 171457184 - Rbck1 protein_coding retained_intron MGP_NODShiLtJ_T0057974.1 MGP_NODShiLtJ_G0026474.1 mouse_genomes_project 2 171452497 171458050 - MGP_NODShiLtJ_P0057974 Rbck1 protein_coding protein_coding MGP_NODShiLtJ_T0057975.1 MGP_NODShiLtJ_G0026474.1 mouse_genomes_project 2 171456623 171458302 - Rbck1 protein_coding retained_intron MGP_NODShiLtJ_T0057976.1 MGP_NODShiLtJ_G0026474.1 mouse_genomes_project 2 171458225 171461549 - Rbck1 protein_coding processed_transcript MGP_NODShiLtJ_T0057977.1 MGP_NODShiLtJ_G0026474.1 mouse_genomes_project 2 171460094 171466081 - Rbck1 protein_coding processed_transcript MGP_NODShiLtJ_T0054586.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65164171 65283941 - MGP_NODShiLtJ_P0054586 Baz2b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054587.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65164175 65408984 - MGP_NODShiLtJ_P0054587 Baz2b protein_coding protein_coding MGP_NODShiLtJ_T0054588.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65164257 65279716 - MGP_NODShiLtJ_P0054588 Baz2b protein_coding protein_coding MGP_NODShiLtJ_T0054589.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65168001 65178381 - MGP_NODShiLtJ_P0054589 Baz2b protein_coding protein_coding MGP_NODShiLtJ_T0054590.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65180024 65190723 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054591.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65183648 65187343 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054592.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65191512 65218673 - MGP_NODShiLtJ_P0054592 Baz2b protein_coding protein_coding MGP_NODShiLtJ_T0054593.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65223938 65230585 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054594.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65250977 65409027 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054595.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65256634 65371250 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054596.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65278077 65408879 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054597.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65356823 65508735 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054598.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65504072 65508697 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054599.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65504539 65508086 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0054600.1 MGP_NODShiLtJ_G0025594.1 mouse_genomes_project 2 65504540 65508644 - Baz2b protein_coding processed_transcript MGP_NODShiLtJ_T0013660.1 MGP_NODShiLtJ_G0011768.1 mouse_genomes_project 2 153592417 153593059 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017662.1 MGP_NODShiLtJ_G0015312.1 mouse_genomes_project 2 103402813 103426226 + D930015M05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0001067.1 MGP_NODShiLtJ_G0000993.1 mouse_genomes_project 2 131301759 131302692 - TEC TEC MGP_NODShiLtJ_T0013538.1 MGP_NODShiLtJ_G0011646.1 mouse_genomes_project 2 97414207 97414931 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013467.1 MGP_NODShiLtJ_G0011575.1 mouse_genomes_project 2 75502934 75503324 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054791.1 MGP_NODShiLtJ_G0025627.1 mouse_genomes_project 2 75330870 75363148 + MGP_NODShiLtJ_P0054791 protein_coding protein_coding MGP_NODShiLtJ_T0054792.1 MGP_NODShiLtJ_G0025627.1 mouse_genomes_project 2 75332268 75417612 + MGP_NODShiLtJ_P0054792 protein_coding protein_coding MGP_NODShiLtJ_T0054793.1 MGP_NODShiLtJ_G0025627.1 mouse_genomes_project 2 75332297 75351360 + protein_coding processed_transcript MGP_NODShiLtJ_T0054794.1 MGP_NODShiLtJ_G0025627.1 mouse_genomes_project 2 75339196 75417610 + MGP_NODShiLtJ_P0054794 protein_coding protein_coding MGP_NODShiLtJ_T0054795.1 MGP_NODShiLtJ_G0025627.1 mouse_genomes_project 2 75391657 75392673 + protein_coding retained_intron MGP_NODShiLtJ_T0013292.1 MGP_NODShiLtJ_G0011400.1 mouse_genomes_project 2 2032678 2032989 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055570.1 MGP_NODShiLtJ_G0025893.1 mouse_genomes_project 2 99010196 99011207 - MGP_NODShiLtJ_P0055570 Olfr1200 protein_coding protein_coding MGP_NODShiLtJ_T0100396.1 MGP_NODShiLtJ_G0038790.1 mouse_genomes_project 2 146619455 146619584 + Gm24665 snoRNA snoRNA MGP_NODShiLtJ_T0057209.1 MGP_NODShiLtJ_G0026285.1 mouse_genomes_project 2 144216179 144217281 - MGP_NODShiLtJ_P0057209 1500011K16Rik protein_coding protein_coding MGP_NODShiLtJ_T0003978.1 MGP_NODShiLtJ_G0003532.1 mouse_genomes_project 2 94017042 94018956 + Gm13716 antisense antisense MGP_NODShiLtJ_T0101107.1 MGP_NODShiLtJ_G0039454.1 mouse_genomes_project 2 179883859 179884307 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0057499.1 MGP_NODShiLtJ_G0026353.1 mouse_genomes_project 2 148662021 148667294 + MGP_NODShiLtJ_P0057499 Prnd protein_coding protein_coding MGP_NODShiLtJ_T0057500.1 MGP_NODShiLtJ_G0026353.1 mouse_genomes_project 2 148662022 148667294 + MGP_NODShiLtJ_P0057500 Prnd protein_coding protein_coding MGP_NODShiLtJ_T0057501.1 MGP_NODShiLtJ_G0026353.1 mouse_genomes_project 2 148662022 148667294 + MGP_NODShiLtJ_P0057501 Prnd protein_coding protein_coding MGP_NODShiLtJ_T0057502.1 MGP_NODShiLtJ_G0026353.1 mouse_genomes_project 2 148662197 148667294 + MGP_NODShiLtJ_P0057502 Prnd protein_coding protein_coding MGP_NODShiLtJ_T0054179.1 MGP_NODShiLtJ_G0025502.1 mouse_genomes_project 2 36897343 36898264 + MGP_NODShiLtJ_P0054179 Olfr338 protein_coding protein_coding MGP_NODShiLtJ_T0013518.1 MGP_NODShiLtJ_G0011626.1 mouse_genomes_project 2 92380824 92382077 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010372.1 MGP_NODShiLtJ_G0008505.1 mouse_genomes_project 2 178535669 178535795 + Gm26141 miRNA miRNA MGP_NODShiLtJ_T0099142.1 MGP_NODShiLtJ_G0037536.1 mouse_genomes_project 2 177460609 177460708 + Gm23463 snRNA snRNA MGP_NODShiLtJ_T0054888.1 MGP_NODShiLtJ_G0025648.1 mouse_genomes_project 2 77443588 77458555 + MGP_NODShiLtJ_P0054888 Gad1 protein_coding protein_coding MGP_NODShiLtJ_T0054889.1 MGP_NODShiLtJ_G0025648.1 mouse_genomes_project 2 77453368 77495435 + MGP_NODShiLtJ_P0054889 Gad1 protein_coding protein_coding MGP_NODShiLtJ_T0054890.1 MGP_NODShiLtJ_G0025648.1 mouse_genomes_project 2 77453368 77478472 + MGP_NODShiLtJ_P0054890 Gad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054891.1 MGP_NODShiLtJ_G0025648.1 mouse_genomes_project 2 77453489 77468463 + Gad1 protein_coding retained_intron MGP_NODShiLtJ_T0054892.1 MGP_NODShiLtJ_G0025648.1 mouse_genomes_project 2 77453522 77475936 + MGP_NODShiLtJ_P0054892 Gad1 protein_coding protein_coding MGP_NODShiLtJ_T0054893.1 MGP_NODShiLtJ_G0025648.1 mouse_genomes_project 2 77454223 77476457 + MGP_NODShiLtJ_P0054893 Gad1 protein_coding protein_coding MGP_NODShiLtJ_T0054894.1 MGP_NODShiLtJ_G0025648.1 mouse_genomes_project 2 77454766 77477282 + MGP_NODShiLtJ_P0054894 Gad1 protein_coding protein_coding MGP_NODShiLtJ_T0054895.1 MGP_NODShiLtJ_G0025648.1 mouse_genomes_project 2 77457700 77495433 + Gad1 protein_coding processed_transcript MGP_NODShiLtJ_T0055411.1 MGP_NODShiLtJ_G0025756.1 mouse_genomes_project 2 93882514 93886627 + Tnks1bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055412.1 MGP_NODShiLtJ_G0025756.1 mouse_genomes_project 2 93882547 93907580 + Tnks1bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055413.1 MGP_NODShiLtJ_G0025756.1 mouse_genomes_project 2 93882588 93898618 + MGP_NODShiLtJ_P0055413 Tnks1bp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055414.1 MGP_NODShiLtJ_G0025756.1 mouse_genomes_project 2 93884954 93886545 + Tnks1bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055415.1 MGP_NODShiLtJ_G0025756.1 mouse_genomes_project 2 93884954 93907584 + MGP_NODShiLtJ_P0055415 Tnks1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0055416.1 MGP_NODShiLtJ_G0025756.1 mouse_genomes_project 2 93885102 93907574 + Tnks1bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055417.1 MGP_NODShiLtJ_G0025756.1 mouse_genomes_project 2 93885387 93893098 + Tnks1bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0055418.1 MGP_NODShiLtJ_G0025756.1 mouse_genomes_project 2 93892699 93907584 + MGP_NODShiLtJ_P0055418 Tnks1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0003836.1 MGP_NODShiLtJ_G0003427.1 mouse_genomes_project 2 3090025 3094245 + Gm13267 antisense antisense MGP_NODShiLtJ_T0003837.1 MGP_NODShiLtJ_G0003427.1 mouse_genomes_project 2 3090115 3092998 + Gm13267 antisense antisense MGP_NODShiLtJ_T0052518.1 MGP_NODShiLtJ_G0025227.1 mouse_genomes_project 2 20454772 20992685 + MGP_NODShiLtJ_P0052518 Gpr158 protein_coding protein_coding MGP_NODShiLtJ_T0052519.1 MGP_NODShiLtJ_G0025227.1 mouse_genomes_project 2 20454797 20971756 + Gpr158 protein_coding retained_intron MGP_NODShiLtJ_T0058998.1 MGP_NODShiLtJ_G0026715.1 mouse_genomes_project 2 185942628 185958324 + MGP_NODShiLtJ_P0058998 Slc2a10 protein_coding protein_coding MGP_NODShiLtJ_T0058999.1 MGP_NODShiLtJ_G0026715.1 mouse_genomes_project 2 185947681 185953189 + Slc2a10 protein_coding processed_transcript MGP_NODShiLtJ_T0052760.1 MGP_NODShiLtJ_G0025272.1 mouse_genomes_project 2 24911517 24912889 - Ssna1 protein_coding processed_transcript MGP_NODShiLtJ_T0052761.1 MGP_NODShiLtJ_G0025272.1 mouse_genomes_project 2 24911517 24912895 - MGP_NODShiLtJ_P0052761 Ssna1 protein_coding protein_coding MGP_NODShiLtJ_T0052762.1 MGP_NODShiLtJ_G0025272.1 mouse_genomes_project 2 24911564 24912917 - Ssna1 protein_coding processed_transcript MGP_NODShiLtJ_T0052763.1 MGP_NODShiLtJ_G0025272.1 mouse_genomes_project 2 24912184 24912883 - Ssna1 protein_coding processed_transcript MGP_NODShiLtJ_T0057226.1 MGP_NODShiLtJ_G0026290.1 mouse_genomes_project 2 145035354 145039186 + MGP_NODShiLtJ_P0057226 protein_coding protein_coding MGP_NODShiLtJ_T0057227.1 MGP_NODShiLtJ_G0026290.1 mouse_genomes_project 2 145035417 145043784 + MGP_NODShiLtJ_P0057227 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057228.1 MGP_NODShiLtJ_G0026290.1 mouse_genomes_project 2 145039506 145042163 + MGP_NODShiLtJ_P0057228 protein_coding protein_coding MGP_NODShiLtJ_T0055448.1 MGP_NODShiLtJ_G0025783.1 mouse_genomes_project 2 95118241 95119375 + MGP_NODShiLtJ_P0055448 Olfr1033 protein_coding protein_coding MGP_NODShiLtJ_T0013681.1 MGP_NODShiLtJ_G0011789.1 mouse_genomes_project 2 163297371 163298192 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003940.1 MGP_NODShiLtJ_G0003508.1 mouse_genomes_project 2 75125867 75127537 + Gm13596 antisense antisense MGP_NODShiLtJ_T0057628.1 MGP_NODShiLtJ_G0026379.1 mouse_genomes_project 2 154322569 154360417 - MGP_NODShiLtJ_P0057628 Jag1 protein_coding protein_coding MGP_NODShiLtJ_T0057629.1 MGP_NODShiLtJ_G0026379.1 mouse_genomes_project 2 154324862 154327920 - Jag1 protein_coding retained_intron MGP_NODShiLtJ_T0055013.1 MGP_NODShiLtJ_G0025670.1 mouse_genomes_project 2 80242767 80374475 - MGP_NODShiLtJ_P0055013 Ola1 protein_coding protein_coding MGP_NODShiLtJ_T0055014.1 MGP_NODShiLtJ_G0025670.1 mouse_genomes_project 2 80243166 80374454 - Ola1 protein_coding processed_transcript MGP_NODShiLtJ_T0055015.1 MGP_NODShiLtJ_G0025670.1 mouse_genomes_project 2 80243168 80372988 - MGP_NODShiLtJ_P0055015 Ola1 protein_coding protein_coding MGP_NODShiLtJ_T0055016.1 MGP_NODShiLtJ_G0025670.1 mouse_genomes_project 2 80289227 80374361 - MGP_NODShiLtJ_P0055016 Ola1 protein_coding protein_coding MGP_NODShiLtJ_T0055017.1 MGP_NODShiLtJ_G0025670.1 mouse_genomes_project 2 80357770 80374440 - Ola1 protein_coding processed_transcript MGP_NODShiLtJ_T0055018.1 MGP_NODShiLtJ_G0025670.1 mouse_genomes_project 2 80372898 80378952 - Ola1 protein_coding processed_transcript MGP_NODShiLtJ_T0007282.1 MGP_NODShiLtJ_G0005963.1 mouse_genomes_project 2 154964314 155143694 + Gm14064 lincRNA lincRNA MGP_NODShiLtJ_T0058783.1 MGP_NODShiLtJ_G0026654.1 mouse_genomes_project 2 184279058 184311018 + MGP_NODShiLtJ_P0058783 Pabpc1l protein_coding protein_coding MGP_NODShiLtJ_T0058784.1 MGP_NODShiLtJ_G0026654.1 mouse_genomes_project 2 184284649 184298599 + Pabpc1l protein_coding processed_transcript MGP_NODShiLtJ_T0058785.1 MGP_NODShiLtJ_G0026654.1 mouse_genomes_project 2 184291223 184298826 + Pabpc1l protein_coding processed_transcript MGP_NODShiLtJ_T0058786.1 MGP_NODShiLtJ_G0026654.1 mouse_genomes_project 2 184305397 184311018 + Pabpc1l protein_coding processed_transcript MGP_NODShiLtJ_T0058787.1 MGP_NODShiLtJ_G0026654.1 mouse_genomes_project 2 184308454 184310647 + Pabpc1l protein_coding processed_transcript MGP_NODShiLtJ_T0001043.1 MGP_NODShiLtJ_G0000969.1 mouse_genomes_project 2 36347598 36350586 + TEC TEC MGP_NODShiLtJ_T0058272.1 MGP_NODShiLtJ_G0026558.1 mouse_genomes_project 2 175141221 175165230 + MGP_NODShiLtJ_P0058272 Myh7b protein_coding protein_coding MGP_NODShiLtJ_T0058273.1 MGP_NODShiLtJ_G0026558.1 mouse_genomes_project 2 175159167 175161304 + Myh7b protein_coding processed_transcript MGP_NODShiLtJ_T0058274.1 MGP_NODShiLtJ_G0026558.1 mouse_genomes_project 2 175164373 175165126 + Myh7b protein_coding retained_intron MGP_NODShiLtJ_T0013483.1 MGP_NODShiLtJ_G0011591.1 mouse_genomes_project 2 80283631 80284430 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057730.1 MGP_NODShiLtJ_G0026405.1 mouse_genomes_project 2 162875588 162884193 - MGP_NODShiLtJ_P0057730 Rbbp9 protein_coding protein_coding MGP_NODShiLtJ_T0057731.1 MGP_NODShiLtJ_G0026405.1 mouse_genomes_project 2 162877144 162884114 - Rbbp9 protein_coding processed_transcript MGP_NODShiLtJ_T0013673.1 MGP_NODShiLtJ_G0011781.1 mouse_genomes_project 2 161347650 161348451 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059354.1 MGP_NODShiLtJ_G0026797.1 mouse_genomes_project 2 201389278 201459789 - MGP_NODShiLtJ_P0059354 Taf4 protein_coding protein_coding MGP_NODShiLtJ_T0059355.1 MGP_NODShiLtJ_G0026797.1 mouse_genomes_project 2 201390565 201456571 - MGP_NODShiLtJ_P0059355 Taf4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059356.1 MGP_NODShiLtJ_G0026797.1 mouse_genomes_project 2 201399115 201400098 - Taf4 protein_coding processed_transcript MGP_NODShiLtJ_T0059357.1 MGP_NODShiLtJ_G0026797.1 mouse_genomes_project 2 201399893 201408097 - Taf4 protein_coding processed_transcript MGP_NODShiLtJ_T0003946.1 MGP_NODShiLtJ_G0003513.1 mouse_genomes_project 2 78501334 78512871 - Dlx1as antisense antisense MGP_NODShiLtJ_T0003947.1 MGP_NODShiLtJ_G0003513.1 mouse_genomes_project 2 78508935 78512879 - Dlx1as antisense antisense MGP_NODShiLtJ_T0003948.1 MGP_NODShiLtJ_G0003513.1 mouse_genomes_project 2 78512790 78522743 - Dlx1as antisense antisense MGP_NODShiLtJ_T0003949.1 MGP_NODShiLtJ_G0003513.1 mouse_genomes_project 2 78517724 78522824 - Dlx1as antisense antisense MGP_NODShiLtJ_T0054181.1 MGP_NODShiLtJ_G0025504.1 mouse_genomes_project 2 36973425 36974364 + MGP_NODShiLtJ_P0054181 Olfr340 protein_coding protein_coding MGP_NODShiLtJ_T0057549.1 MGP_NODShiLtJ_G0026362.1 mouse_genomes_project 2 149550447 149566674 + MGP_NODShiLtJ_P0057549 Chgb protein_coding protein_coding MGP_NODShiLtJ_T0007066.1 MGP_NODShiLtJ_G0005791.1 mouse_genomes_project 2 1161026 1170678 + Gm13189 lincRNA lincRNA MGP_NODShiLtJ_T0007143.1 MGP_NODShiLtJ_G0005850.1 mouse_genomes_project 2 55041719 55098829 + Gm13497 lincRNA lincRNA MGP_NODShiLtJ_T0013745.1 MGP_NODShiLtJ_G0011853.1 mouse_genomes_project 2 187646263 187648302 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058095.1 MGP_NODShiLtJ_G0026515.1 mouse_genomes_project 2 172883591 172900799 - MGP_NODShiLtJ_P0058095 Commd7 protein_coding protein_coding MGP_NODShiLtJ_T0058096.1 MGP_NODShiLtJ_G0026515.1 mouse_genomes_project 2 172885383 172900749 - Commd7 protein_coding retained_intron MGP_NODShiLtJ_T0058097.1 MGP_NODShiLtJ_G0026515.1 mouse_genomes_project 2 172885383 172900758 - MGP_NODShiLtJ_P0058097 Commd7 protein_coding protein_coding MGP_NODShiLtJ_T0055782.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102123644 102129252 + MGP_NODShiLtJ_P0055782 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055783.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102123805 102124819 + Pacsin3 protein_coding retained_intron MGP_NODShiLtJ_T0055784.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102123834 102128224 + MGP_NODShiLtJ_P0055784 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055785.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102123852 102133832 + MGP_NODShiLtJ_P0055785 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055786.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102124503 102128929 + MGP_NODShiLtJ_P0055786 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055787.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102124503 102133831 + MGP_NODShiLtJ_P0055787 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055788.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102124503 102133832 + MGP_NODShiLtJ_P0055788 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055789.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102124528 102129018 + MGP_NODShiLtJ_P0055789 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055790.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102125019 102133832 + MGP_NODShiLtJ_P0055790 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055791.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102125025 102128984 + MGP_NODShiLtJ_P0055791 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055792.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102126888 102127912 + Pacsin3 protein_coding processed_transcript MGP_NODShiLtJ_T0055793.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102127511 102129281 + MGP_NODShiLtJ_P0055793 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0055794.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102128487 102129352 + Pacsin3 protein_coding retained_intron MGP_NODShiLtJ_T0055795.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102132065 102132686 + Pacsin3 protein_coding retained_intron MGP_NODShiLtJ_T0055796.1 MGP_NODShiLtJ_G0025971.1 mouse_genomes_project 2 102132258 102133512 + MGP_NODShiLtJ_P0055796 Pacsin3 protein_coding protein_coding MGP_NODShiLtJ_T0058946.1 MGP_NODShiLtJ_G0026704.1 mouse_genomes_project 2 185431859 185441421 + MGP_NODShiLtJ_P0058946 Cd40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058947.1 MGP_NODShiLtJ_G0026704.1 mouse_genomes_project 2 185431859 185451614 + MGP_NODShiLtJ_P0058947 Cd40 protein_coding protein_coding MGP_NODShiLtJ_T0058948.1 MGP_NODShiLtJ_G0026704.1 mouse_genomes_project 2 185431868 185450317 + MGP_NODShiLtJ_P0058948 Cd40 protein_coding protein_coding MGP_NODShiLtJ_T0058949.1 MGP_NODShiLtJ_G0026704.1 mouse_genomes_project 2 185431912 185449440 + MGP_NODShiLtJ_P0058949 Cd40 protein_coding protein_coding MGP_NODShiLtJ_T0058950.1 MGP_NODShiLtJ_G0026704.1 mouse_genomes_project 2 185431913 185441478 + MGP_NODShiLtJ_P0058950 Cd40 protein_coding protein_coding MGP_NODShiLtJ_T0058951.1 MGP_NODShiLtJ_G0026704.1 mouse_genomes_project 2 185431936 185449662 + MGP_NODShiLtJ_P0058951 Cd40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058952.1 MGP_NODShiLtJ_G0026704.1 mouse_genomes_project 2 185441373 185445390 + Cd40 protein_coding retained_intron MGP_NODShiLtJ_T0058891.1 MGP_NODShiLtJ_G0026695.1 mouse_genomes_project 2 185185198 185187338 - Spata25 protein_coding processed_transcript MGP_NODShiLtJ_T0058892.1 MGP_NODShiLtJ_G0026695.1 mouse_genomes_project 2 185186191 185187347 - MGP_NODShiLtJ_P0058892 Spata25 protein_coding protein_coding MGP_NODShiLtJ_T0007299.1 MGP_NODShiLtJ_G0005976.1 mouse_genomes_project 2 169694946 169698741 - Gm26681 lincRNA lincRNA MGP_NODShiLtJ_T0057694.1 MGP_NODShiLtJ_G0026398.1 mouse_genomes_project 2 162552953 162574430 - MGP_NODShiLtJ_P0057694 Snx5 protein_coding protein_coding MGP_NODShiLtJ_T0057695.1 MGP_NODShiLtJ_G0026398.1 mouse_genomes_project 2 162552953 162574096 - MGP_NODShiLtJ_P0057695 Snx5 protein_coding protein_coding MGP_NODShiLtJ_T0057696.1 MGP_NODShiLtJ_G0026398.1 mouse_genomes_project 2 162553894 162557418 - Snx5 protein_coding processed_transcript MGP_NODShiLtJ_T0057697.1 MGP_NODShiLtJ_G0026398.1 mouse_genomes_project 2 162553946 162556390 - Snx5 protein_coding processed_transcript MGP_NODShiLtJ_T0057698.1 MGP_NODShiLtJ_G0026398.1 mouse_genomes_project 2 162557437 162559116 - Snx5 protein_coding processed_transcript MGP_NODShiLtJ_T0057699.1 MGP_NODShiLtJ_G0026398.1 mouse_genomes_project 2 162558403 162559095 - Snx5 protein_coding processed_transcript MGP_NODShiLtJ_T0057700.1 MGP_NODShiLtJ_G0026398.1 mouse_genomes_project 2 162558506 162564286 - Snx5 protein_coding processed_transcript MGP_NODShiLtJ_T0057701.1 MGP_NODShiLtJ_G0026398.1 mouse_genomes_project 2 162572977 162574308 - Snx5 protein_coding processed_transcript MGP_NODShiLtJ_T0058893.1 MGP_NODShiLtJ_G0026696.1 mouse_genomes_project 2 185189554 185192279 - MGP_NODShiLtJ_P0058893 Neurl2 protein_coding protein_coding MGP_NODShiLtJ_T0053925.1 MGP_NODShiLtJ_G0025463.1 mouse_genomes_project 2 33068398 33129718 - MGP_NODShiLtJ_P0053925 Stxbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053926.1 MGP_NODShiLtJ_G0025463.1 mouse_genomes_project 2 33068403 33097973 - Stxbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0053927.1 MGP_NODShiLtJ_G0025463.1 mouse_genomes_project 2 33068757 33129675 - MGP_NODShiLtJ_P0053927 Stxbp1 protein_coding protein_coding MGP_NODShiLtJ_T0053928.1 MGP_NODShiLtJ_G0025463.1 mouse_genomes_project 2 33097296 33098379 - Stxbp1 protein_coding retained_intron MGP_NODShiLtJ_T0058127.1 MGP_NODShiLtJ_G0026524.1 mouse_genomes_project 2 173292260 173318309 + MGP_NODShiLtJ_P0058127 Bpifa6 protein_coding protein_coding MGP_NODShiLtJ_T0004116.1 MGP_NODShiLtJ_G0003631.1 mouse_genomes_project 2 187861305 187862529 + Gm14291 antisense antisense MGP_NODShiLtJ_T0054126.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35867938 35902931 - MGP_NODShiLtJ_P0054126 Ggta1 protein_coding protein_coding MGP_NODShiLtJ_T0054127.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35867938 35938404 - MGP_NODShiLtJ_P0054127 Ggta1 protein_coding protein_coding MGP_NODShiLtJ_T0054128.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35867942 35938587 - MGP_NODShiLtJ_P0054128 Ggta1 protein_coding protein_coding MGP_NODShiLtJ_T0054129.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35867942 35938387 - MGP_NODShiLtJ_P0054129 Ggta1 protein_coding protein_coding MGP_NODShiLtJ_T0054130.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35869868 35892492 - MGP_NODShiLtJ_P0054130 Ggta1 protein_coding protein_coding MGP_NODShiLtJ_T0054131.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35869868 35892492 - MGP_NODShiLtJ_P0054131 Ggta1 protein_coding protein_coding MGP_NODShiLtJ_T0054132.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35877070 35912387 - MGP_NODShiLtJ_P0054132 Ggta1 protein_coding protein_coding MGP_NODShiLtJ_T0054133.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35892493 35916115 - Ggta1 protein_coding processed_transcript MGP_NODShiLtJ_T0054134.1 MGP_NODShiLtJ_G0025493.1 mouse_genomes_project 2 35902811 35941024 - Ggta1 protein_coding processed_transcript MGP_NODShiLtJ_T0055427.1 MGP_NODShiLtJ_G0025763.1 mouse_genomes_project 2 94333539 94334710 - MGP_NODShiLtJ_P0055427 Olfr995 protein_coding protein_coding MGP_NODShiLtJ_T0013501.1 MGP_NODShiLtJ_G0011609.1 mouse_genomes_project 2 86708961 86709163 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007338.1 MGP_NODShiLtJ_G0006010.1 mouse_genomes_project 2 187069986 187074661 - Gm14267 lincRNA lincRNA MGP_NODShiLtJ_T0053616.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31086984 31132175 + MGP_NODShiLtJ_P0053616 Usp20 protein_coding protein_coding MGP_NODShiLtJ_T0053617.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31087039 31088940 + Usp20 protein_coding retained_intron MGP_NODShiLtJ_T0053618.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31087068 31116187 + MGP_NODShiLtJ_P0053618 Usp20 protein_coding protein_coding MGP_NODShiLtJ_T0053619.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31087102 31111538 + MGP_NODShiLtJ_P0053619 Usp20 protein_coding protein_coding MGP_NODShiLtJ_T0053620.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31087134 31107723 + MGP_NODShiLtJ_P0053620 Usp20 protein_coding protein_coding MGP_NODShiLtJ_T0053621.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31103454 31111207 + MGP_NODShiLtJ_P0053621 Usp20 protein_coding protein_coding MGP_NODShiLtJ_T0053622.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31103555 31111538 + MGP_NODShiLtJ_P0053622 Usp20 protein_coding protein_coding MGP_NODShiLtJ_T0053623.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31103841 31132171 + MGP_NODShiLtJ_P0053623 Usp20 protein_coding protein_coding MGP_NODShiLtJ_T0053624.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31103847 31114988 + Usp20 protein_coding processed_transcript MGP_NODShiLtJ_T0053625.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31106486 31115017 + MGP_NODShiLtJ_P0053625 Usp20 protein_coding protein_coding MGP_NODShiLtJ_T0053626.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31111149 31112315 + Usp20 protein_coding retained_intron MGP_NODShiLtJ_T0053627.1 MGP_NODShiLtJ_G0025418.1 mouse_genomes_project 2 31128407 31129970 + Usp20 protein_coding retained_intron MGP_NODShiLtJ_T0053578.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30885405 30901202 + MGP_NODShiLtJ_P0053578 Ntmt1 protein_coding protein_coding MGP_NODShiLtJ_T0053579.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30885520 30901186 + MGP_NODShiLtJ_P0053579 Ntmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053580.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30885521 30900554 + MGP_NODShiLtJ_P0053580 Ntmt1 protein_coding protein_coding MGP_NODShiLtJ_T0053581.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30885536 30893512 + Ntmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0053582.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30885573 30893976 + Ntmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0053583.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30885692 30900721 + MGP_NODShiLtJ_P0053583 Ntmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053584.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30885769 30897798 + MGP_NODShiLtJ_P0053584 Ntmt1 protein_coding protein_coding MGP_NODShiLtJ_T0053585.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30895245 30897918 + MGP_NODShiLtJ_P0053585 Ntmt1 protein_coding protein_coding MGP_NODShiLtJ_T0053586.1 MGP_NODShiLtJ_G0025411.1 mouse_genomes_project 2 30896951 30900728 + MGP_NODShiLtJ_P0053586 Ntmt1 protein_coding protein_coding MGP_NODShiLtJ_T0013730.1 MGP_NODShiLtJ_G0011838.1 mouse_genomes_project 2 179658560 179659092 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057095.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142965236 143016222 - MGP_NODShiLtJ_P0057095 Gabpb1 protein_coding protein_coding MGP_NODShiLtJ_T0057096.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142966707 143016156 - MGP_NODShiLtJ_P0057096 Gabpb1 protein_coding protein_coding MGP_NODShiLtJ_T0057097.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142966709 143016198 - MGP_NODShiLtJ_P0057097 Gabpb1 protein_coding protein_coding MGP_NODShiLtJ_T0057098.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142976406 143016991 - MGP_NODShiLtJ_P0057098 Gabpb1 protein_coding protein_coding MGP_NODShiLtJ_T0057099.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142976791 143016140 - MGP_NODShiLtJ_P0057099 Gabpb1 protein_coding protein_coding MGP_NODShiLtJ_T0057100.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142985517 143016246 - MGP_NODShiLtJ_P0057100 Gabpb1 protein_coding protein_coding MGP_NODShiLtJ_T0057101.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142990095 143015993 - Gabpb1 protein_coding processed_transcript MGP_NODShiLtJ_T0057102.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142991384 143016006 - MGP_NODShiLtJ_P0057102 Gabpb1 protein_coding protein_coding MGP_NODShiLtJ_T0057103.1 MGP_NODShiLtJ_G0026259.1 mouse_genomes_project 2 142991461 143003321 - MGP_NODShiLtJ_P0057103 Gabpb1 protein_coding protein_coding MGP_NODShiLtJ_T0059256.1 MGP_NODShiLtJ_G0026770.1 mouse_genomes_project 2 194270265 194282277 + MGP_NODShiLtJ_P0059256 Rbm38 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059257.1 MGP_NODShiLtJ_G0026770.1 mouse_genomes_project 2 194270279 194283092 + Rbm38 protein_coding retained_intron MGP_NODShiLtJ_T0059258.1 MGP_NODShiLtJ_G0026770.1 mouse_genomes_project 2 194270406 194282173 + MGP_NODShiLtJ_P0059258 Rbm38 protein_coding protein_coding MGP_NODShiLtJ_T0059259.1 MGP_NODShiLtJ_G0026770.1 mouse_genomes_project 2 194270477 194282014 + MGP_NODShiLtJ_P0059259 Rbm38 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059260.1 MGP_NODShiLtJ_G0026770.1 mouse_genomes_project 2 194270804 194282073 + MGP_NODShiLtJ_P0059260 Rbm38 protein_coding protein_coding MGP_NODShiLtJ_T0059261.1 MGP_NODShiLtJ_G0026770.1 mouse_genomes_project 2 194271415 194283064 + Rbm38 protein_coding retained_intron MGP_NODShiLtJ_T0057935.1 MGP_NODShiLtJ_G0026462.1 mouse_genomes_project 2 170734580 170765176 - MGP_NODShiLtJ_P0057935 Rad21l protein_coding protein_coding MGP_NODShiLtJ_T0057936.1 MGP_NODShiLtJ_G0026462.1 mouse_genomes_project 2 170734580 170765176 - MGP_NODShiLtJ_P0057936 Rad21l protein_coding protein_coding MGP_NODShiLtJ_T0001004.1 MGP_NODShiLtJ_G0000930.1 mouse_genomes_project 2 9124732 9127297 + TEC TEC MGP_NODShiLtJ_T0058627.1 MGP_NODShiLtJ_G0026616.1 mouse_genomes_project 2 178291698 178331257 + MGP_NODShiLtJ_P0058627 Arhgap40 protein_coding protein_coding MGP_NODShiLtJ_T0058628.1 MGP_NODShiLtJ_G0026616.1 mouse_genomes_project 2 178291698 178331402 + MGP_NODShiLtJ_P0058628 Arhgap40 protein_coding protein_coding MGP_NODShiLtJ_T0058629.1 MGP_NODShiLtJ_G0026616.1 mouse_genomes_project 2 178322397 178331402 + Arhgap40 protein_coding retained_intron MGP_NODShiLtJ_T0013468.1 MGP_NODShiLtJ_G0011576.1 mouse_genomes_project 2 76042639 76043143 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054103.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35638035 35659860 - MGP_NODShiLtJ_P0054103 Rab14 protein_coding protein_coding MGP_NODShiLtJ_T0054104.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35638035 35659860 - MGP_NODShiLtJ_P0054104 Rab14 protein_coding protein_coding MGP_NODShiLtJ_T0054105.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35640562 35642484 - Rab14 protein_coding processed_transcript MGP_NODShiLtJ_T0054106.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35641623 35642582 - Rab14 protein_coding processed_transcript MGP_NODShiLtJ_T0054107.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35642036 35659712 - Rab14 protein_coding retained_intron MGP_NODShiLtJ_T0054108.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35644718 35651099 - Rab14 protein_coding processed_transcript MGP_NODShiLtJ_T0054109.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35646139 35649858 - Rab14 protein_coding retained_intron MGP_NODShiLtJ_T0054110.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35648333 35659529 - Rab14 protein_coding processed_transcript MGP_NODShiLtJ_T0054111.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35649956 35651279 - Rab14 protein_coding processed_transcript MGP_NODShiLtJ_T0054112.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35654614 35659722 - Rab14 protein_coding retained_intron MGP_NODShiLtJ_T0054113.1 MGP_NODShiLtJ_G0025488.1 mouse_genomes_project 2 35658524 35659718 - Rab14 protein_coding processed_transcript MGP_NODShiLtJ_T0101842.1 MGP_NODShiLtJ_G0040010.1 mouse_genomes_project 2 145876943 145878069 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0054203.1 MGP_NODShiLtJ_G0025524.1 mouse_genomes_project 2 37760199 37761168 - MGP_NODShiLtJ_P0054203 Olfr361 protein_coding protein_coding MGP_NODShiLtJ_T0055633.1 MGP_NODShiLtJ_G0025945.1 mouse_genomes_project 2 100696879 100697806 - MGP_NODShiLtJ_P0055633 Olfr1264 protein_coding protein_coding MGP_NODShiLtJ_T0054206.1 MGP_NODShiLtJ_G0025527.1 mouse_genomes_project 2 37894160 37895090 + MGP_NODShiLtJ_P0054206 Olfr366 protein_coding protein_coding MGP_NODShiLtJ_T0055444.1 MGP_NODShiLtJ_G0025779.1 mouse_genomes_project 2 94970334 94971368 + MGP_NODShiLtJ_P0055444 Olfr1026 protein_coding protein_coding MGP_NODShiLtJ_T0055342.1 MGP_NODShiLtJ_G0025737.1 mouse_genomes_project 2 93438767 93441154 + Btbd18 protein_coding processed_transcript MGP_NODShiLtJ_T0055343.1 MGP_NODShiLtJ_G0025737.1 mouse_genomes_project 2 93439234 93467641 + MGP_NODShiLtJ_P0055343 Btbd18 protein_coding protein_coding MGP_NODShiLtJ_T0003907.1 MGP_NODShiLtJ_G0003482.1 mouse_genomes_project 2 36321060 36325256 + 9030204H09Rik antisense antisense MGP_NODShiLtJ_T0013340.1 MGP_NODShiLtJ_G0011448.1 mouse_genomes_project 2 21878486 21878847 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010384.1 MGP_NODShiLtJ_G0008517.1 mouse_genomes_project 2 195015037 195015156 - Mir6340 miRNA miRNA MGP_NODShiLtJ_T0010366.1 MGP_NODShiLtJ_G0008499.1 mouse_genomes_project 2 174867929 174868038 + Mir695 miRNA miRNA MGP_NODShiLtJ_T0013492.1 MGP_NODShiLtJ_G0011600.1 mouse_genomes_project 2 84737068 84737433 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053062.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26199334 26246442 - MGP_NODShiLtJ_P0053062 Notch1 protein_coding protein_coding MGP_NODShiLtJ_T0053063.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26203649 26204179 - Notch1 protein_coding processed_transcript MGP_NODShiLtJ_T0053064.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26206902 26209045 - Notch1 protein_coding processed_transcript MGP_NODShiLtJ_T0053065.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26206902 26208086 - Notch1 protein_coding processed_transcript MGP_NODShiLtJ_T0053066.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26206902 26207799 - Notch1 protein_coding processed_transcript MGP_NODShiLtJ_T0053067.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26206902 26208226 - Notch1 protein_coding processed_transcript MGP_NODShiLtJ_T0053068.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26206902 26207595 - Notch1 protein_coding processed_transcript MGP_NODShiLtJ_T0053069.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26209974 26211181 - Notch1 protein_coding processed_transcript MGP_NODShiLtJ_T0053070.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26211256 26211930 - Notch1 protein_coding processed_transcript MGP_NODShiLtJ_T0053071.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26212707 26259173 - MGP_NODShiLtJ_P0053071 Notch1 protein_coding protein_coding MGP_NODShiLtJ_T0053072.1 MGP_NODShiLtJ_G0025328.1 mouse_genomes_project 2 26240774 26246444 - Notch1 protein_coding retained_intron MGP_NODShiLtJ_T0013725.1 MGP_NODShiLtJ_G0011833.1 mouse_genomes_project 2 176630501 176631221 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052097.1 MGP_NODShiLtJ_G0025159.1 mouse_genomes_project 2 2257668 2364802 + MGP_NODShiLtJ_P0052097 Ccdc3 protein_coding protein_coding MGP_NODShiLtJ_T0007248.1 MGP_NODShiLtJ_G0005934.1 mouse_genomes_project 2 132294497 132298360 - Gm29340 lincRNA lincRNA MGP_NODShiLtJ_T0003888.1 MGP_NODShiLtJ_G0003466.1 mouse_genomes_project 2 30879023 30885009 + antisense antisense MGP_NODShiLtJ_T0013377.1 MGP_NODShiLtJ_G0011485.1 mouse_genomes_project 2 37749235 37756668 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001016.1 MGP_NODShiLtJ_G0000942.1 mouse_genomes_project 2 11143505 11147470 + TEC TEC MGP_NODShiLtJ_T0056504.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134320362 134343497 + MGP_NODShiLtJ_P0056504 Knstrn protein_coding protein_coding MGP_NODShiLtJ_T0056505.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134320591 134340045 + MGP_NODShiLtJ_P0056505 Knstrn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056506.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134320591 134339977 + MGP_NODShiLtJ_P0056506 Knstrn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056507.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134320592 134339954 + MGP_NODShiLtJ_P0056507 Knstrn protein_coding protein_coding MGP_NODShiLtJ_T0056508.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134320613 134340438 + MGP_NODShiLtJ_P0056508 Knstrn protein_coding protein_coding MGP_NODShiLtJ_T0056509.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134320636 134336836 + MGP_NODShiLtJ_P0056509 Knstrn protein_coding protein_coding MGP_NODShiLtJ_T0056510.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134320655 134339864 + MGP_NODShiLtJ_P0056510 Knstrn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056511.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134337433 134342944 + MGP_NODShiLtJ_P0056511 Knstrn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056512.1 MGP_NODShiLtJ_G0026140.1 mouse_genomes_project 2 134339870 134362250 + MGP_NODShiLtJ_P0056512 Knstrn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052510.1 MGP_NODShiLtJ_G0025225.1 mouse_genomes_project 2 20258583 20284979 - MGP_NODShiLtJ_P0052510 Enkur protein_coding protein_coding MGP_NODShiLtJ_T0052511.1 MGP_NODShiLtJ_G0025225.1 mouse_genomes_project 2 20272856 20284853 - Enkur protein_coding processed_transcript MGP_NODShiLtJ_T0052512.1 MGP_NODShiLtJ_G0025225.1 mouse_genomes_project 2 20275188 20284966 - Enkur protein_coding processed_transcript MGP_NODShiLtJ_T0058762.1 MGP_NODShiLtJ_G0026647.1 mouse_genomes_project 2 183843113 183870179 - MGP_NODShiLtJ_P0058762 Serinc3 protein_coding protein_coding MGP_NODShiLtJ_T0058763.1 MGP_NODShiLtJ_G0026647.1 mouse_genomes_project 2 183843152 183870084 - MGP_NODShiLtJ_P0058763 Serinc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058764.1 MGP_NODShiLtJ_G0026647.1 mouse_genomes_project 2 183861179 183870173 - Serinc3 protein_coding processed_transcript MGP_NODShiLtJ_T0010347.1 MGP_NODShiLtJ_G0008480.1 mouse_genomes_project 2 137171819 137171920 - Gm22953 miRNA miRNA MGP_NODShiLtJ_T0054543.1 MGP_NODShiLtJ_G0025589.1 mouse_genomes_project 2 64110121 64156578 + MGP_NODShiLtJ_P0054543 Gm11099 protein_coding protein_coding MGP_NODShiLtJ_T0052885.1 MGP_NODShiLtJ_G0025291.1 mouse_genomes_project 2 25188736 25220030 - MGP_NODShiLtJ_P0052885 Traf2 protein_coding protein_coding MGP_NODShiLtJ_T0052886.1 MGP_NODShiLtJ_G0025291.1 mouse_genomes_project 2 25189619 25212215 - Traf2 protein_coding retained_intron MGP_NODShiLtJ_T0052887.1 MGP_NODShiLtJ_G0025291.1 mouse_genomes_project 2 25189619 25220000 - MGP_NODShiLtJ_P0052887 Traf2 protein_coding protein_coding MGP_NODShiLtJ_T0017730.1 MGP_NODShiLtJ_G0015342.1 mouse_genomes_project 2 148523049 148552603 - 5330413P13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017731.1 MGP_NODShiLtJ_G0015342.1 mouse_genomes_project 2 148548566 148552608 - 5330413P13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017732.1 MGP_NODShiLtJ_G0015342.1 mouse_genomes_project 2 148548783 148552571 - 5330413P13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0057603.1 MGP_NODShiLtJ_G0026374.1 mouse_genomes_project 2 153223855 153581306 - MGP_NODShiLtJ_P0057603 Pak7 protein_coding protein_coding MGP_NODShiLtJ_T0057604.1 MGP_NODShiLtJ_G0026374.1 mouse_genomes_project 2 153224997 153581328 - MGP_NODShiLtJ_P0057604 Pak7 protein_coding protein_coding MGP_NODShiLtJ_T0057605.1 MGP_NODShiLtJ_G0026374.1 mouse_genomes_project 2 153452814 153581335 - Pak7 protein_coding retained_intron MGP_NODShiLtJ_T0013582.1 MGP_NODShiLtJ_G0011690.1 mouse_genomes_project 2 117806039 117807045 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055610.1 MGP_NODShiLtJ_G0025929.1 mouse_genomes_project 2 100115205 100116129 - MGP_NODShiLtJ_P0055610 Olfr1245 protein_coding protein_coding MGP_NODShiLtJ_T0010239.1 MGP_NODShiLtJ_G0008372.1 mouse_genomes_project 2 8306756 8306875 + Mir669e miRNA miRNA MGP_NODShiLtJ_T0056096.1 MGP_NODShiLtJ_G0026025.1 mouse_genomes_project 2 116210518 116229843 + MGP_NODShiLtJ_P0056096 Apip protein_coding protein_coding MGP_NODShiLtJ_T0056097.1 MGP_NODShiLtJ_G0026025.1 mouse_genomes_project 2 116210538 116229830 + Apip protein_coding processed_transcript MGP_NODShiLtJ_T0056098.1 MGP_NODShiLtJ_G0026025.1 mouse_genomes_project 2 116219786 116228989 + Apip protein_coding processed_transcript MGP_NODShiLtJ_T0056099.1 MGP_NODShiLtJ_G0026025.1 mouse_genomes_project 2 116229034 116229837 + Apip protein_coding processed_transcript MGP_NODShiLtJ_T0058925.1 MGP_NODShiLtJ_G0026701.1 mouse_genomes_project 2 185302213 185311088 + MGP_NODShiLtJ_P0058925 Mmp9 protein_coding protein_coding MGP_NODShiLtJ_T0058926.1 MGP_NODShiLtJ_G0026701.1 mouse_genomes_project 2 185310413 185318058 + MGP_NODShiLtJ_P0058926 Mmp9 protein_coding protein_coding MGP_NODShiLtJ_T0058927.1 MGP_NODShiLtJ_G0026701.1 mouse_genomes_project 2 185312894 185313461 + Mmp9 protein_coding retained_intron MGP_NODShiLtJ_T0058928.1 MGP_NODShiLtJ_G0026701.1 mouse_genomes_project 2 185316593 185318058 + Mmp9 protein_coding processed_transcript MGP_NODShiLtJ_T0057365.1 MGP_NODShiLtJ_G0026327.1 mouse_genomes_project 2 147154332 147202795 - MGP_NODShiLtJ_P0057365 protein_coding protein_coding MGP_NODShiLtJ_T0057366.1 MGP_NODShiLtJ_G0026327.1 mouse_genomes_project 2 147166427 147202784 - MGP_NODShiLtJ_P0057366 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055515.1 MGP_NODShiLtJ_G0025842.1 mouse_genomes_project 2 97382982 97384161 - MGP_NODShiLtJ_P0055515 protein_coding protein_coding MGP_NODShiLtJ_T0057056.1 MGP_NODShiLtJ_G0026250.1 mouse_genomes_project 2 141986070 142035609 - MGP_NODShiLtJ_P0057056 Secisbp2l protein_coding protein_coding MGP_NODShiLtJ_T0057057.1 MGP_NODShiLtJ_G0026250.1 mouse_genomes_project 2 141993754 142009293 - MGP_NODShiLtJ_P0057057 Secisbp2l protein_coding protein_coding MGP_NODShiLtJ_T0057058.1 MGP_NODShiLtJ_G0026250.1 mouse_genomes_project 2 141999360 142001246 - Secisbp2l protein_coding retained_intron MGP_NODShiLtJ_T0057278.1 MGP_NODShiLtJ_G0026305.1 mouse_genomes_project 2 145861768 145868339 - MGP_NODShiLtJ_P0057278 Il1b protein_coding protein_coding MGP_NODShiLtJ_T0057279.1 MGP_NODShiLtJ_G0026305.1 mouse_genomes_project 2 145862320 145864550 - Il1b protein_coding processed_transcript MGP_NODShiLtJ_T0057280.1 MGP_NODShiLtJ_G0026305.1 mouse_genomes_project 2 145866927 145868339 - Il1b protein_coding retained_intron MGP_NODShiLtJ_T0013636.1 MGP_NODShiLtJ_G0011744.1 mouse_genomes_project 2 144996107 144997088 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056328.1 MGP_NODShiLtJ_G0026079.1 mouse_genomes_project 2 125926246 125927182 + MGP_NODShiLtJ_P0056328 protein_coding protein_coding MGP_NODShiLtJ_T0007320.1 MGP_NODShiLtJ_G0005993.1 mouse_genomes_project 2 180902091 180903199 - Gm14228 lincRNA lincRNA MGP_NODShiLtJ_T0055616.1 MGP_NODShiLtJ_G0025933.1 mouse_genomes_project 2 100255382 100256328 - MGP_NODShiLtJ_P0055616 Olfr1251 protein_coding protein_coding MGP_NODShiLtJ_T0054759.1 MGP_NODShiLtJ_G0025620.1 mouse_genomes_project 2 72581658 72628431 - MGP_NODShiLtJ_P0054759 Scn1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054760.1 MGP_NODShiLtJ_G0025620.1 mouse_genomes_project 2 72581661 72737053 - MGP_NODShiLtJ_P0054760 Scn1a protein_coding protein_coding MGP_NODShiLtJ_T0054761.1 MGP_NODShiLtJ_G0025620.1 mouse_genomes_project 2 72581662 72765603 - MGP_NODShiLtJ_P0054761 Scn1a protein_coding protein_coding MGP_NODShiLtJ_T0054762.1 MGP_NODShiLtJ_G0025620.1 mouse_genomes_project 2 72581664 72664577 - MGP_NODShiLtJ_P0054762 Scn1a protein_coding protein_coding MGP_NODShiLtJ_T0054763.1 MGP_NODShiLtJ_G0025620.1 mouse_genomes_project 2 72583765 72664559 - MGP_NODShiLtJ_P0054763 Scn1a protein_coding protein_coding MGP_NODShiLtJ_T0054764.1 MGP_NODShiLtJ_G0025620.1 mouse_genomes_project 2 72583772 72628624 - MGP_NODShiLtJ_P0054764 Scn1a protein_coding protein_coding MGP_NODShiLtJ_T0054765.1 MGP_NODShiLtJ_G0025620.1 mouse_genomes_project 2 72639070 72765606 - MGP_NODShiLtJ_P0054765 Scn1a protein_coding protein_coding MGP_NODShiLtJ_T0054766.1 MGP_NODShiLtJ_G0025620.1 mouse_genomes_project 2 72661763 72765580 - Scn1a protein_coding retained_intron MGP_NODShiLtJ_T0059662.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203398911 203469670 + MGP_NODShiLtJ_P0059662 Myt1 protein_coding protein_coding MGP_NODShiLtJ_T0059663.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203398975 203467308 + MGP_NODShiLtJ_P0059663 Myt1 protein_coding protein_coding MGP_NODShiLtJ_T0059664.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203402608 203436426 + Myt1 protein_coding processed_transcript MGP_NODShiLtJ_T0059665.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203402882 203446262 + MGP_NODShiLtJ_P0059665 Myt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059666.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203421632 203456865 + MGP_NODShiLtJ_P0059666 Myt1 protein_coding protein_coding MGP_NODShiLtJ_T0059667.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203436840 203469605 + Myt1 protein_coding retained_intron MGP_NODShiLtJ_T0059668.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203438131 203447793 + Myt1 protein_coding processed_transcript MGP_NODShiLtJ_T0059669.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203452450 203461351 + MGP_NODShiLtJ_P0059669 Myt1 protein_coding protein_coding MGP_NODShiLtJ_T0059670.1 MGP_NODShiLtJ_G0026853.1 mouse_genomes_project 2 203460810 203463249 + Myt1 protein_coding retained_intron MGP_NODShiLtJ_T0007291.1 MGP_NODShiLtJ_G0005971.1 mouse_genomes_project 2 166515694 166549748 - 9030622O22Rik lincRNA lincRNA MGP_NODShiLtJ_T0007292.1 MGP_NODShiLtJ_G0005971.1 mouse_genomes_project 2 166546286 166617338 - 9030622O22Rik lincRNA lincRNA MGP_NODShiLtJ_T0007293.1 MGP_NODShiLtJ_G0005971.1 mouse_genomes_project 2 166546440 166615407 - 9030622O22Rik lincRNA lincRNA MGP_NODShiLtJ_T0010380.1 MGP_NODShiLtJ_G0008513.1 mouse_genomes_project 2 188978318 188978413 - Gm24561 miRNA miRNA MGP_NODShiLtJ_T0013588.1 MGP_NODShiLtJ_G0011696.1 mouse_genomes_project 2 119445013 119445169 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057838.1 MGP_NODShiLtJ_G0026436.1 mouse_genomes_project 2 167479638 167486574 - MGP_NODShiLtJ_P0057838 9230104L09Rik protein_coding protein_coding MGP_NODShiLtJ_T0057839.1 MGP_NODShiLtJ_G0026436.1 mouse_genomes_project 2 167479831 167504828 - 9230104L09Rik protein_coding processed_transcript MGP_NODShiLtJ_T0055533.1 MGP_NODShiLtJ_G0025858.1 mouse_genomes_project 2 97741878 97742856 + MGP_NODShiLtJ_P0055533 Olfr1145 protein_coding protein_coding MGP_NODShiLtJ_T0101843.1 MGP_NODShiLtJ_G0040011.1 mouse_genomes_project 2 156289378 156289963 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098011.1 MGP_NODShiLtJ_G0036423.1 mouse_genomes_project 2 133830181 133830275 + Gm22651 rRNA rRNA MGP_NODShiLtJ_T0010328.1 MGP_NODShiLtJ_G0008461.1 mouse_genomes_project 2 103168374 103168472 + Mir1955 miRNA miRNA MGP_NODShiLtJ_T0001035.1 MGP_NODShiLtJ_G0000961.1 mouse_genomes_project 2 24466978 24468776 - TEC TEC MGP_NODShiLtJ_T0007167.1 MGP_NODShiLtJ_G0005872.1 mouse_genomes_project 2 79838235 79911266 - 6430710C18Rik lincRNA lincRNA MGP_NODShiLtJ_T0007168.1 MGP_NODShiLtJ_G0005872.1 mouse_genomes_project 2 79838894 79843257 - 6430710C18Rik lincRNA lincRNA MGP_NODShiLtJ_T0007169.1 MGP_NODShiLtJ_G0005872.1 mouse_genomes_project 2 79882155 79911311 - 6430710C18Rik lincRNA lincRNA MGP_NODShiLtJ_T0007170.1 MGP_NODShiLtJ_G0005872.1 mouse_genomes_project 2 79882472 79897632 - 6430710C18Rik lincRNA lincRNA MGP_NODShiLtJ_T0059244.1 MGP_NODShiLtJ_G0026767.1 mouse_genomes_project 2 194109762 194184215 - MGP_NODShiLtJ_P0059244 Bmp7 protein_coding protein_coding MGP_NODShiLtJ_T0059245.1 MGP_NODShiLtJ_G0026767.1 mouse_genomes_project 2 194160117 194183986 - Bmp7 protein_coding retained_intron MGP_NODShiLtJ_T0057477.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173197 148204334 + MGP_NODShiLtJ_P0057477 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057478.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173465 148209303 + MGP_NODShiLtJ_P0057478 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057479.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173624 148204373 + MGP_NODShiLtJ_P0057479 Smox protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057480.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173644 148209292 + Smox protein_coding retained_intron MGP_NODShiLtJ_T0057481.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173644 148209292 + MGP_NODShiLtJ_P0057481 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057482.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173644 148209292 + MGP_NODShiLtJ_P0057482 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057483.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173644 148209292 + MGP_NODShiLtJ_P0057483 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057484.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173644 148209292 + MGP_NODShiLtJ_P0057484 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057485.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173644 148209292 + MGP_NODShiLtJ_P0057485 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057486.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173644 148209292 + MGP_NODShiLtJ_P0057486 Smox protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057487.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173644 148209292 + MGP_NODShiLtJ_P0057487 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057488.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173665 148210042 + MGP_NODShiLtJ_P0057488 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057489.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173694 148209287 + MGP_NODShiLtJ_P0057489 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057490.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148173965 148196198 + MGP_NODShiLtJ_P0057490 Smox protein_coding protein_coding MGP_NODShiLtJ_T0057491.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148192972 148196235 + Smox protein_coding processed_transcript MGP_NODShiLtJ_T0057492.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148204276 148208999 + MGP_NODShiLtJ_P0057492 Smox protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057493.1 MGP_NODShiLtJ_G0026348.1 mouse_genomes_project 2 148206018 148209261 + Smox protein_coding retained_intron MGP_NODShiLtJ_T0001060.1 MGP_NODShiLtJ_G0000986.1 mouse_genomes_project 2 75690601 75691466 + TEC TEC MGP_NODShiLtJ_T0100406.1 MGP_NODShiLtJ_G0038800.1 mouse_genomes_project 2 167243011 167243123 + Gm25866 snoRNA snoRNA MGP_NODShiLtJ_T0013506.1 MGP_NODShiLtJ_G0011614.1 mouse_genomes_project 2 88499522 88500130 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053307.1 MGP_NODShiLtJ_G0025375.1 mouse_genomes_project 2 29080859 29088844 + MGP_NODShiLtJ_P0053307 Setx protein_coding protein_coding MGP_NODShiLtJ_T0053308.1 MGP_NODShiLtJ_G0025375.1 mouse_genomes_project 2 29081670 29145188 + MGP_NODShiLtJ_P0053308 Setx protein_coding protein_coding MGP_NODShiLtJ_T0053309.1 MGP_NODShiLtJ_G0025375.1 mouse_genomes_project 2 29082564 29089048 + Setx protein_coding retained_intron MGP_NODShiLtJ_T0053310.1 MGP_NODShiLtJ_G0025375.1 mouse_genomes_project 2 29116228 29122248 + Setx protein_coding processed_transcript MGP_NODShiLtJ_T0053311.1 MGP_NODShiLtJ_G0025375.1 mouse_genomes_project 2 29123943 29142257 + MGP_NODShiLtJ_P0053311 Setx protein_coding protein_coding MGP_NODShiLtJ_T0053985.1 MGP_NODShiLtJ_G0025471.1 mouse_genomes_project 2 33716038 33747813 - MGP_NODShiLtJ_P0053985 Zbtb34 protein_coding protein_coding MGP_NODShiLtJ_T0053986.1 MGP_NODShiLtJ_G0025471.1 mouse_genomes_project 2 33716038 33744711 - MGP_NODShiLtJ_P0053986 Zbtb34 protein_coding protein_coding MGP_NODShiLtJ_T0053987.1 MGP_NODShiLtJ_G0025471.1 mouse_genomes_project 2 33721835 33747806 - Zbtb34 protein_coding processed_transcript MGP_NODShiLtJ_T0003857.1 MGP_NODShiLtJ_G0003445.1 mouse_genomes_project 2 19754180 19758089 - Gm13362 antisense antisense MGP_NODShiLtJ_T0013668.1 MGP_NODShiLtJ_G0011776.1 mouse_genomes_project 2 158856625 158857112 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013652.1 MGP_NODShiLtJ_G0011760.1 mouse_genomes_project 2 148625451 148626325 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003939.1 MGP_NODShiLtJ_G0003507.1 mouse_genomes_project 2 74005821 74033486 - Gm13601 antisense antisense MGP_NODShiLtJ_T0055466.1 MGP_NODShiLtJ_G0025801.1 mouse_genomes_project 2 95601583 95602591 - MGP_NODShiLtJ_P0055466 Olfr1058 protein_coding protein_coding MGP_NODShiLtJ_T0058954.1 MGP_NODShiLtJ_G0026706.1 mouse_genomes_project 2 185499296 185631750 - MGP_NODShiLtJ_P0058954 Cdh22 protein_coding protein_coding MGP_NODShiLtJ_T0058955.1 MGP_NODShiLtJ_G0026706.1 mouse_genomes_project 2 185500116 185572276 - MGP_NODShiLtJ_P0058955 Cdh22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054195.1 MGP_NODShiLtJ_G0025517.1 mouse_genomes_project 2 37539708 37540644 - MGP_NODShiLtJ_P0054195 Olfr353 protein_coding protein_coding MGP_NODShiLtJ_T0013533.1 MGP_NODShiLtJ_G0011641.1 mouse_genomes_project 2 97076450 97077393 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100365.1 MGP_NODShiLtJ_G0038759.1 mouse_genomes_project 2 52970582 52970703 - Gm25215 snoRNA snoRNA MGP_NODShiLtJ_T0101316.1 MGP_NODShiLtJ_G0039569.1 mouse_genomes_project 2 96360873 96361820 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0058345.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175565365 175575477 + MGP_NODShiLtJ_P0058345 Ergic3 protein_coding protein_coding MGP_NODShiLtJ_T0058346.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175565426 175575477 + MGP_NODShiLtJ_P0058346 Ergic3 protein_coding protein_coding MGP_NODShiLtJ_T0058347.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175565543 175568543 + Ergic3 protein_coding retained_intron MGP_NODShiLtJ_T0058348.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175565939 175574836 + MGP_NODShiLtJ_P0058348 Ergic3 protein_coding protein_coding MGP_NODShiLtJ_T0058349.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175567758 175575285 + MGP_NODShiLtJ_P0058349 Ergic3 protein_coding protein_coding MGP_NODShiLtJ_T0058350.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175573706 175575348 + Ergic3 protein_coding processed_transcript MGP_NODShiLtJ_T0058351.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175574412 175575294 + Ergic3 protein_coding processed_transcript MGP_NODShiLtJ_T0058352.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175574691 175575477 + Ergic3 protein_coding retained_intron MGP_NODShiLtJ_T0058353.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175574743 175575477 + Ergic3 protein_coding retained_intron MGP_NODShiLtJ_T0058354.1 MGP_NODShiLtJ_G0026572.1 mouse_genomes_project 2 175574845 175575475 + Ergic3 protein_coding retained_intron MGP_NODShiLtJ_T0099137.1 MGP_NODShiLtJ_G0037531.1 mouse_genomes_project 2 157206247 157206351 + Gm27385 snRNA snRNA MGP_NODShiLtJ_T0004091.1 MGP_NODShiLtJ_G0003614.1 mouse_genomes_project 2 180705569 180713552 - Gm27206 antisense antisense MGP_NODShiLtJ_T0001030.1 MGP_NODShiLtJ_G0000956.1 mouse_genomes_project 2 13311619 13314003 - TEC TEC MGP_NODShiLtJ_T0055903.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103355423 103361364 - MGP_NODShiLtJ_P0055903 Gyltl1b protein_coding protein_coding MGP_NODShiLtJ_T0055904.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103355423 103361435 - MGP_NODShiLtJ_P0055904 Gyltl1b protein_coding protein_coding MGP_NODShiLtJ_T0055905.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103355424 103361414 - Gyltl1b protein_coding retained_intron MGP_NODShiLtJ_T0055906.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103355428 103361396 - MGP_NODShiLtJ_P0055906 Gyltl1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055907.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103355429 103361389 - MGP_NODShiLtJ_P0055907 Gyltl1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055908.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103355437 103361406 - MGP_NODShiLtJ_P0055908 Gyltl1b protein_coding protein_coding MGP_NODShiLtJ_T0055909.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103355437 103362345 - MGP_NODShiLtJ_P0055909 Gyltl1b protein_coding protein_coding MGP_NODShiLtJ_T0055910.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103355448 103361411 - MGP_NODShiLtJ_P0055910 Gyltl1b protein_coding protein_coding MGP_NODShiLtJ_T0055911.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103356169 103356899 - Gyltl1b protein_coding retained_intron MGP_NODShiLtJ_T0055912.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103356352 103357154 - Gyltl1b protein_coding retained_intron MGP_NODShiLtJ_T0055913.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103357395 103359852 - Gyltl1b protein_coding retained_intron MGP_NODShiLtJ_T0055914.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103357691 103360039 - Gyltl1b protein_coding processed_transcript MGP_NODShiLtJ_T0055915.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103357764 103360451 - Gyltl1b protein_coding retained_intron MGP_NODShiLtJ_T0055916.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103358446 103361411 - Gyltl1b protein_coding retained_intron MGP_NODShiLtJ_T0055917.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103360083 103361396 - Gyltl1b protein_coding retained_intron MGP_NODShiLtJ_T0055918.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103360312 103365247 - MGP_NODShiLtJ_P0055918 Gyltl1b protein_coding protein_coding MGP_NODShiLtJ_T0055919.1 MGP_NODShiLtJ_G0025988.1 mouse_genomes_project 2 103360362 103362323 - Gyltl1b protein_coding retained_intron MGP_NODShiLtJ_T0056445.1 MGP_NODShiLtJ_G0026125.1 mouse_genomes_project 2 132616986 132627506 + Fam98b protein_coding retained_intron MGP_NODShiLtJ_T0056446.1 MGP_NODShiLtJ_G0026125.1 mouse_genomes_project 2 132616986 132640738 + MGP_NODShiLtJ_P0056446 Fam98b protein_coding protein_coding MGP_NODShiLtJ_T0056447.1 MGP_NODShiLtJ_G0026125.1 mouse_genomes_project 2 132626043 132627504 + Fam98b protein_coding processed_transcript MGP_NODShiLtJ_T0055879.1 MGP_NODShiLtJ_G0025985.1 mouse_genomes_project 2 102895731 102897696 + MGP_NODShiLtJ_P0055879 Gm9821 protein_coding protein_coding MGP_NODShiLtJ_T0007127.1 MGP_NODShiLtJ_G0005837.1 mouse_genomes_project 2 36736776 36737502 + Gm13431 lincRNA lincRNA MGP_NODShiLtJ_T0007128.1 MGP_NODShiLtJ_G0005837.1 mouse_genomes_project 2 36736824 36745881 + Gm13431 lincRNA lincRNA MGP_NODShiLtJ_T0007129.1 MGP_NODShiLtJ_G0005837.1 mouse_genomes_project 2 36741091 36745813 + Gm13431 lincRNA lincRNA MGP_NODShiLtJ_T0010290.1 MGP_NODShiLtJ_G0008423.1 mouse_genomes_project 2 29852009 29852074 + Mir219b miRNA miRNA MGP_NODShiLtJ_T0001024.1 MGP_NODShiLtJ_G0000950.1 mouse_genomes_project 2 12844420 12847041 + TEC TEC MGP_NODShiLtJ_T0057847.1 MGP_NODShiLtJ_G0026440.1 mouse_genomes_project 2 168694211 168694901 - MGP_NODShiLtJ_P0057847 C530025M09Rik protein_coding protein_coding MGP_NODShiLtJ_T0053222.1 MGP_NODShiLtJ_G0025357.1 mouse_genomes_project 2 28037810 28059133 + Olfm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053223.1 MGP_NODShiLtJ_G0025357.1 mouse_genomes_project 2 28037810 28076375 + MGP_NODShiLtJ_P0053223 Olfm1 protein_coding protein_coding MGP_NODShiLtJ_T0053224.1 MGP_NODShiLtJ_G0025357.1 mouse_genomes_project 2 28037911 28076649 + MGP_NODShiLtJ_P0053224 Olfm1 protein_coding protein_coding MGP_NODShiLtJ_T0053225.1 MGP_NODShiLtJ_G0025357.1 mouse_genomes_project 2 28050377 28059133 + MGP_NODShiLtJ_P0053225 Olfm1 protein_coding protein_coding MGP_NODShiLtJ_T0053226.1 MGP_NODShiLtJ_G0025357.1 mouse_genomes_project 2 28050377 28076649 + MGP_NODShiLtJ_P0053226 Olfm1 protein_coding protein_coding MGP_NODShiLtJ_T0052102.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 2980616 3036309 - MGP_NODShiLtJ_P0052102 Cdc123 protein_coding protein_coding MGP_NODShiLtJ_T0052103.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 2980987 2984924 - Cdc123 protein_coding processed_transcript MGP_NODShiLtJ_T0052104.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 2984686 2990706 - Cdc123 protein_coding retained_intron MGP_NODShiLtJ_T0052105.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 2991163 2999781 - Cdc123 protein_coding processed_transcript MGP_NODShiLtJ_T0052106.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 2991282 3022649 - Cdc123 protein_coding retained_intron MGP_NODShiLtJ_T0052107.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 2998513 3023144 - MGP_NODShiLtJ_P0052107 Cdc123 protein_coding protein_coding MGP_NODShiLtJ_T0052108.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 2999676 3036086 - Cdc123 protein_coding retained_intron MGP_NODShiLtJ_T0052109.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 3009066 3011061 - Cdc123 protein_coding retained_intron MGP_NODShiLtJ_T0052110.1 MGP_NODShiLtJ_G0025161.1 mouse_genomes_project 2 3010757 3035996 - Cdc123 protein_coding processed_transcript MGP_NODShiLtJ_T0052119.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3061902 3089948 - MGP_NODShiLtJ_P0052119 Sec61a2 protein_coding protein_coding MGP_NODShiLtJ_T0052120.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3061944 3089850 - MGP_NODShiLtJ_P0052120 Sec61a2 protein_coding protein_coding MGP_NODShiLtJ_T0052121.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3062510 3067376 - MGP_NODShiLtJ_P0052121 Sec61a2 protein_coding protein_coding MGP_NODShiLtJ_T0052122.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3062908 3065712 - Sec61a2 protein_coding processed_transcript MGP_NODShiLtJ_T0052123.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3064326 3065206 - Sec61a2 protein_coding processed_transcript MGP_NODShiLtJ_T0052124.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3064713 3067940 - Sec61a2 protein_coding processed_transcript MGP_NODShiLtJ_T0052125.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3067321 3068906 - Sec61a2 protein_coding processed_transcript MGP_NODShiLtJ_T0052126.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3067389 3069287 - Sec61a2 protein_coding processed_transcript MGP_NODShiLtJ_T0052127.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3068770 3089835 - MGP_NODShiLtJ_P0052127 Sec61a2 protein_coding protein_coding MGP_NODShiLtJ_T0052128.1 MGP_NODShiLtJ_G0025164.1 mouse_genomes_project 2 3073542 3089850 - Sec61a2 protein_coding retained_intron MGP_NODShiLtJ_T0013632.1 MGP_NODShiLtJ_G0011740.1 mouse_genomes_project 2 143226904 143227730 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001058.1 MGP_NODShiLtJ_G0000984.1 mouse_genomes_project 2 75634622 75636128 + TEC TEC MGP_NODShiLtJ_T0003898.1 MGP_NODShiLtJ_G0003476.1 mouse_genomes_project 2 33479607 33483582 + Gm13528 antisense antisense MGP_NODShiLtJ_T0056817.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136879203 136892967 + Tubgcp4 protein_coding processed_transcript MGP_NODShiLtJ_T0056818.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136879717 136907204 + MGP_NODShiLtJ_P0056818 Tubgcp4 protein_coding protein_coding MGP_NODShiLtJ_T0056819.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136879758 136907203 + MGP_NODShiLtJ_P0056819 Tubgcp4 protein_coding protein_coding MGP_NODShiLtJ_T0056820.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136879764 136907204 + MGP_NODShiLtJ_P0056820 Tubgcp4 protein_coding protein_coding MGP_NODShiLtJ_T0056821.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136879789 136907203 + Tubgcp4 protein_coding retained_intron MGP_NODShiLtJ_T0056822.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136879795 136884314 + Tubgcp4 protein_coding processed_transcript MGP_NODShiLtJ_T0056823.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136879817 136902667 + MGP_NODShiLtJ_P0056823 Tubgcp4 protein_coding protein_coding MGP_NODShiLtJ_T0056824.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136879842 136893010 + Tubgcp4 protein_coding processed_transcript MGP_NODShiLtJ_T0056825.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136880131 136895251 + Tubgcp4 protein_coding retained_intron MGP_NODShiLtJ_T0056826.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136882059 136893013 + Tubgcp4 protein_coding processed_transcript MGP_NODShiLtJ_T0056827.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136892149 136893340 + Tubgcp4 protein_coding retained_intron MGP_NODShiLtJ_T0056828.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136895891 136905483 + Tubgcp4 protein_coding retained_intron MGP_NODShiLtJ_T0056829.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136896622 136900868 + Tubgcp4 protein_coding retained_intron MGP_NODShiLtJ_T0056830.1 MGP_NODShiLtJ_G0026200.1 mouse_genomes_project 2 136900401 136904682 + Tubgcp4 protein_coding retained_intron MGP_NODShiLtJ_T0055456.1 MGP_NODShiLtJ_G0025791.1 mouse_genomes_project 2 95296944 95297904 - MGP_NODShiLtJ_P0055456 Olfr52 protein_coding protein_coding MGP_NODShiLtJ_T0056331.1 MGP_NODShiLtJ_G0026082.1 mouse_genomes_project 2 126106860 126107887 - MGP_NODShiLtJ_P0056331 Olfr1290 protein_coding protein_coding MGP_NODShiLtJ_T0007097.1 MGP_NODShiLtJ_G0005815.1 mouse_genomes_project 2 24115476 24141814 - Gm13417 lincRNA lincRNA MGP_NODShiLtJ_T0059519.1 MGP_NODShiLtJ_G0026832.1 mouse_genomes_project 2 202796896 202811935 - MGP_NODShiLtJ_P0059519 Helz2 protein_coding protein_coding MGP_NODShiLtJ_T0059520.1 MGP_NODShiLtJ_G0026832.1 mouse_genomes_project 2 202796897 202811933 - MGP_NODShiLtJ_P0059520 Helz2 protein_coding protein_coding MGP_NODShiLtJ_T0059521.1 MGP_NODShiLtJ_G0026832.1 mouse_genomes_project 2 202796900 202811871 - MGP_NODShiLtJ_P0059521 Helz2 protein_coding protein_coding MGP_NODShiLtJ_T0059522.1 MGP_NODShiLtJ_G0026832.1 mouse_genomes_project 2 202796903 202805662 - Helz2 protein_coding retained_intron MGP_NODShiLtJ_T0059523.1 MGP_NODShiLtJ_G0026832.1 mouse_genomes_project 2 202807064 202811933 - Helz2 protein_coding retained_intron MGP_NODShiLtJ_T0054535.1 MGP_NODShiLtJ_G0025587.1 mouse_genomes_project 2 63812672 63887685 + Upp2 protein_coding processed_transcript MGP_NODShiLtJ_T0054536.1 MGP_NODShiLtJ_G0025587.1 mouse_genomes_project 2 63812692 63834203 + Upp2 protein_coding processed_transcript MGP_NODShiLtJ_T0054537.1 MGP_NODShiLtJ_G0025587.1 mouse_genomes_project 2 63812761 64039883 + MGP_NODShiLtJ_P0054537 Upp2 protein_coding protein_coding MGP_NODShiLtJ_T0054538.1 MGP_NODShiLtJ_G0025587.1 mouse_genomes_project 2 63996945 64038154 + MGP_NODShiLtJ_P0054538 Upp2 protein_coding protein_coding MGP_NODShiLtJ_T0054539.1 MGP_NODShiLtJ_G0025587.1 mouse_genomes_project 2 63997183 64037580 + MGP_NODShiLtJ_P0054539 Upp2 protein_coding protein_coding MGP_NODShiLtJ_T0054540.1 MGP_NODShiLtJ_G0025587.1 mouse_genomes_project 2 64010751 64037214 + Upp2 protein_coding processed_transcript MGP_NODShiLtJ_T0058577.1 MGP_NODShiLtJ_G0026605.1 mouse_genomes_project 2 177472647 177629818 + MGP_NODShiLtJ_P0058577 Ctnnbl1 protein_coding protein_coding MGP_NODShiLtJ_T0058578.1 MGP_NODShiLtJ_G0026605.1 mouse_genomes_project 2 177526517 177544832 + Ctnnbl1 protein_coding processed_transcript MGP_NODShiLtJ_T0058579.1 MGP_NODShiLtJ_G0026605.1 mouse_genomes_project 2 177527933 177556578 + Ctnnbl1 protein_coding processed_transcript MGP_NODShiLtJ_T0058580.1 MGP_NODShiLtJ_G0026605.1 mouse_genomes_project 2 177527966 177574673 + Ctnnbl1 protein_coding processed_transcript MGP_NODShiLtJ_T0004001.1 MGP_NODShiLtJ_G0003545.1 mouse_genomes_project 2 128335406 128337030 - Gm13966 antisense antisense MGP_NODShiLtJ_T0054266.1 MGP_NODShiLtJ_G0025539.1 mouse_genomes_project 2 39350857 39431956 + MGP_NODShiLtJ_P0054266 Nek6 protein_coding protein_coding MGP_NODShiLtJ_T0054267.1 MGP_NODShiLtJ_G0025539.1 mouse_genomes_project 2 39350882 39424826 + MGP_NODShiLtJ_P0054267 Nek6 protein_coding protein_coding MGP_NODShiLtJ_T0054268.1 MGP_NODShiLtJ_G0025539.1 mouse_genomes_project 2 39351028 39423117 + MGP_NODShiLtJ_P0054268 Nek6 protein_coding protein_coding MGP_NODShiLtJ_T0054269.1 MGP_NODShiLtJ_G0025539.1 mouse_genomes_project 2 39353795 39397526 + MGP_NODShiLtJ_P0054269 Nek6 protein_coding protein_coding MGP_NODShiLtJ_T0054270.1 MGP_NODShiLtJ_G0025539.1 mouse_genomes_project 2 39353840 39400606 + MGP_NODShiLtJ_P0054270 Nek6 protein_coding protein_coding MGP_NODShiLtJ_T0013466.1 MGP_NODShiLtJ_G0011574.1 mouse_genomes_project 2 74681272 74681811 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100349.1 MGP_NODShiLtJ_G0038743.1 mouse_genomes_project 2 26675614 26675688 + Gm23969 snoRNA snoRNA MGP_NODShiLtJ_T0058765.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183882829 183958333 + Pkig protein_coding retained_intron MGP_NODShiLtJ_T0058766.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183882829 183960733 + MGP_NODShiLtJ_P0058766 Pkig protein_coding protein_coding MGP_NODShiLtJ_T0058767.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183882842 183960729 + MGP_NODShiLtJ_P0058767 Pkig protein_coding protein_coding MGP_NODShiLtJ_T0058768.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183882858 183960263 + MGP_NODShiLtJ_P0058768 Pkig protein_coding protein_coding MGP_NODShiLtJ_T0058769.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183882901 183955773 + MGP_NODShiLtJ_P0058769 Pkig protein_coding protein_coding MGP_NODShiLtJ_T0058770.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183882920 183960366 + MGP_NODShiLtJ_P0058770 Pkig protein_coding protein_coding MGP_NODShiLtJ_T0058771.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183882923 183960093 + MGP_NODShiLtJ_P0058771 Pkig protein_coding protein_coding MGP_NODShiLtJ_T0058772.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183885942 183960048 + MGP_NODShiLtJ_P0058772 Pkig protein_coding protein_coding MGP_NODShiLtJ_T0058773.1 MGP_NODShiLtJ_G0026648.1 mouse_genomes_project 2 183926504 183960727 + MGP_NODShiLtJ_P0058773 Pkig protein_coding protein_coding MGP_NODShiLtJ_T0057993.1 MGP_NODShiLtJ_G0026485.1 mouse_genomes_project 2 171706148 171707533 - MGP_NODShiLtJ_P0057993 Defb29 protein_coding protein_coding MGP_NODShiLtJ_T0017644.1 MGP_NODShiLtJ_G0015299.1 mouse_genomes_project 2 81966567 81977280 + Gm28309 processed_transcript processed_transcript MGP_NODShiLtJ_T0007126.1 MGP_NODShiLtJ_G0005836.1 mouse_genomes_project 2 35983219 35985779 + Gm35202 lincRNA lincRNA MGP_NODShiLtJ_T0013475.1 MGP_NODShiLtJ_G0011583.1 mouse_genomes_project 2 78370491 78372835 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010271.1 MGP_NODShiLtJ_G0008404.1 mouse_genomes_project 2 12445700 12445779 + Mir511 miRNA miRNA MGP_NODShiLtJ_T0011377.1 MGP_NODShiLtJ_G0009510.1 mouse_genomes_project 2 11355056 11355243 + Gm27540 misc_RNA misc_RNA MGP_NODShiLtJ_T0013528.1 MGP_NODShiLtJ_G0011636.1 mouse_genomes_project 2 96927466 96943801 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013415.1 MGP_NODShiLtJ_G0011523.1 mouse_genomes_project 2 54678663 54680535 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007353.1 MGP_NODShiLtJ_G0006022.1 mouse_genomes_project 2 189907128 189908489 + Gm9873 lincRNA lincRNA MGP_NODShiLtJ_T0007354.1 MGP_NODShiLtJ_G0006022.1 mouse_genomes_project 2 189907373 189908470 + Gm9873 lincRNA lincRNA MGP_NODShiLtJ_T0007326.1 MGP_NODShiLtJ_G0005999.1 mouse_genomes_project 2 183315520 183338385 + Gm11454 lincRNA lincRNA MGP_NODShiLtJ_T0057081.1 MGP_NODShiLtJ_G0026256.1 mouse_genomes_project 2 142609807 142819334 - MGP_NODShiLtJ_P0057081 Atp8b4 protein_coding protein_coding MGP_NODShiLtJ_T0057082.1 MGP_NODShiLtJ_G0026256.1 mouse_genomes_project 2 142611370 142811070 - MGP_NODShiLtJ_P0057082 Atp8b4 protein_coding protein_coding MGP_NODShiLtJ_T0057083.1 MGP_NODShiLtJ_G0026256.1 mouse_genomes_project 2 142674565 142811050 - Atp8b4 protein_coding retained_intron MGP_NODShiLtJ_T0057084.1 MGP_NODShiLtJ_G0026256.1 mouse_genomes_project 2 142674611 142819476 - MGP_NODShiLtJ_P0057084 Atp8b4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057085.1 MGP_NODShiLtJ_G0026256.1 mouse_genomes_project 2 142700699 142820161 - MGP_NODShiLtJ_P0057085 Atp8b4 protein_coding protein_coding MGP_NODShiLtJ_T0007296.1 MGP_NODShiLtJ_G0005974.1 mouse_genomes_project 2 168605065 168661443 - Gm14133 lincRNA lincRNA MGP_NODShiLtJ_T0007297.1 MGP_NODShiLtJ_G0005974.1 mouse_genomes_project 2 168615546 168661486 - Gm14133 lincRNA lincRNA MGP_NODShiLtJ_T0101797.1 MGP_NODShiLtJ_G0039965.1 mouse_genomes_project 2 77102221 77104395 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003870.1 MGP_NODShiLtJ_G0003454.1 mouse_genomes_project 2 25934397 25936979 + Gm27196 antisense antisense MGP_NODShiLtJ_T0013567.1 MGP_NODShiLtJ_G0011675.1 mouse_genomes_project 2 113281122 113281378 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017770.1 MGP_NODShiLtJ_G0015360.1 mouse_genomes_project 2 188271146 188338268 + Gm11476 processed_transcript processed_transcript MGP_NODShiLtJ_T0004039.1 MGP_NODShiLtJ_G0003574.1 mouse_genomes_project 2 149237672 149261294 + 1700026D11Rik antisense antisense MGP_NODShiLtJ_T0004040.1 MGP_NODShiLtJ_G0003574.1 mouse_genomes_project 2 149237754 149262927 + 1700026D11Rik antisense antisense MGP_NODShiLtJ_T0004041.1 MGP_NODShiLtJ_G0003574.1 mouse_genomes_project 2 149237754 149261335 + 1700026D11Rik antisense antisense MGP_NODShiLtJ_T0004042.1 MGP_NODShiLtJ_G0003574.1 mouse_genomes_project 2 149237766 149273082 + 1700026D11Rik antisense antisense MGP_NODShiLtJ_T0004043.1 MGP_NODShiLtJ_G0003574.1 mouse_genomes_project 2 149237782 149261295 + 1700026D11Rik antisense antisense MGP_NODShiLtJ_T0004044.1 MGP_NODShiLtJ_G0003574.1 mouse_genomes_project 2 149237782 149272883 + 1700026D11Rik antisense antisense MGP_NODShiLtJ_T0013416.1 MGP_NODShiLtJ_G0011524.1 mouse_genomes_project 2 55027681 55028505 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017621.1 MGP_NODShiLtJ_G0015284.1 mouse_genomes_project 2 36032177 36041334 - Gm13446 processed_transcript processed_transcript MGP_NODShiLtJ_T0017622.1 MGP_NODShiLtJ_G0015284.1 mouse_genomes_project 2 36037488 36041117 - Gm13446 processed_transcript processed_transcript MGP_NODShiLtJ_T0004076.1 MGP_NODShiLtJ_G0003600.1 mouse_genomes_project 2 172193622 172195260 - Gm14199 antisense antisense MGP_NODShiLtJ_T0010265.1 MGP_NODShiLtJ_G0008398.1 mouse_genomes_project 2 8364319 8364421 + Mir297a-3 miRNA miRNA MGP_NODShiLtJ_T0013308.1 MGP_NODShiLtJ_G0011416.1 mouse_genomes_project 2 9334588 9335585 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058604.1 MGP_NODShiLtJ_G0026612.1 mouse_genomes_project 2 178071372 178086144 + Lbp protein_coding processed_transcript MGP_NODShiLtJ_T0058605.1 MGP_NODShiLtJ_G0026612.1 mouse_genomes_project 2 178071372 178075403 + MGP_NODShiLtJ_P0058605 Lbp protein_coding protein_coding MGP_NODShiLtJ_T0058606.1 MGP_NODShiLtJ_G0026612.1 mouse_genomes_project 2 178071372 178099034 + MGP_NODShiLtJ_P0058606 Lbp protein_coding protein_coding MGP_NODShiLtJ_T0058607.1 MGP_NODShiLtJ_G0026612.1 mouse_genomes_project 2 178071491 178083788 + Lbp protein_coding retained_intron MGP_NODShiLtJ_T0058608.1 MGP_NODShiLtJ_G0026612.1 mouse_genomes_project 2 178079360 178089825 + MGP_NODShiLtJ_P0058608 Lbp protein_coding protein_coding MGP_NODShiLtJ_T0054796.1 MGP_NODShiLtJ_G0025628.1 mouse_genomes_project 2 75534947 75794105 + MGP_NODShiLtJ_P0054796 Cers6 protein_coding protein_coding MGP_NODShiLtJ_T0054797.1 MGP_NODShiLtJ_G0025628.1 mouse_genomes_project 2 75534948 75536231 + Cers6 protein_coding retained_intron MGP_NODShiLtJ_T0054798.1 MGP_NODShiLtJ_G0025628.1 mouse_genomes_project 2 75534956 75750052 + Cers6 protein_coding retained_intron MGP_NODShiLtJ_T0054799.1 MGP_NODShiLtJ_G0025628.1 mouse_genomes_project 2 75534976 75606233 + Cers6 protein_coding retained_intron MGP_NODShiLtJ_T0054800.1 MGP_NODShiLtJ_G0025628.1 mouse_genomes_project 2 75535092 75788542 + MGP_NODShiLtJ_P0054800 Cers6 protein_coding protein_coding MGP_NODShiLtJ_T0054801.1 MGP_NODShiLtJ_G0025628.1 mouse_genomes_project 2 75619505 75729567 + Cers6 protein_coding retained_intron MGP_NODShiLtJ_T0054802.1 MGP_NODShiLtJ_G0025628.1 mouse_genomes_project 2 75632316 75729923 + Cers6 protein_coding retained_intron MGP_NODShiLtJ_T0004003.1 MGP_NODShiLtJ_G0003547.1 mouse_genomes_project 2 128601851 128620863 - 4930533B01Rik antisense antisense MGP_NODShiLtJ_T0059238.1 MGP_NODShiLtJ_G0026766.1 mouse_genomes_project 2 193753294 193765971 + MGP_NODShiLtJ_P0059238 Tfap2c protein_coding protein_coding MGP_NODShiLtJ_T0059239.1 MGP_NODShiLtJ_G0026766.1 mouse_genomes_project 2 193754354 193765886 + Tfap2c protein_coding processed_transcript MGP_NODShiLtJ_T0059240.1 MGP_NODShiLtJ_G0026766.1 mouse_genomes_project 2 193754465 193763504 + Tfap2c protein_coding processed_transcript MGP_NODShiLtJ_T0059241.1 MGP_NODShiLtJ_G0026766.1 mouse_genomes_project 2 193754483 193765968 + MGP_NODShiLtJ_P0059241 Tfap2c protein_coding protein_coding MGP_NODShiLtJ_T0059242.1 MGP_NODShiLtJ_G0026766.1 mouse_genomes_project 2 193754692 193765968 + MGP_NODShiLtJ_P0059242 Tfap2c protein_coding protein_coding MGP_NODShiLtJ_T0059243.1 MGP_NODShiLtJ_G0026766.1 mouse_genomes_project 2 193755817 193757220 + Tfap2c protein_coding processed_transcript MGP_NODShiLtJ_T0055453.1 MGP_NODShiLtJ_G0025788.1 mouse_genomes_project 2 95254468 95255410 - MGP_NODShiLtJ_P0055453 Olfr1042 protein_coding protein_coding MGP_NODShiLtJ_T0054114.1 MGP_NODShiLtJ_G0025489.1 mouse_genomes_project 2 35716245 35767567 + MGP_NODShiLtJ_P0054114 Gsn protein_coding protein_coding MGP_NODShiLtJ_T0054115.1 MGP_NODShiLtJ_G0025489.1 mouse_genomes_project 2 35716249 35762928 + MGP_NODShiLtJ_P0054115 Gsn protein_coding protein_coding MGP_NODShiLtJ_T0054116.1 MGP_NODShiLtJ_G0025489.1 mouse_genomes_project 2 35716261 35753246 + MGP_NODShiLtJ_P0054116 Gsn protein_coding protein_coding MGP_NODShiLtJ_T0054117.1 MGP_NODShiLtJ_G0025489.1 mouse_genomes_project 2 35716274 35753244 + MGP_NODShiLtJ_P0054117 Gsn protein_coding protein_coding MGP_NODShiLtJ_T0054118.1 MGP_NODShiLtJ_G0025489.1 mouse_genomes_project 2 35716314 35750124 + MGP_NODShiLtJ_P0054118 Gsn protein_coding protein_coding MGP_NODShiLtJ_T0054119.1 MGP_NODShiLtJ_G0025489.1 mouse_genomes_project 2 35742056 35767569 + MGP_NODShiLtJ_P0054119 Gsn protein_coding protein_coding MGP_NODShiLtJ_T0054120.1 MGP_NODShiLtJ_G0025489.1 mouse_genomes_project 2 35742189 35744702 + Gsn protein_coding retained_intron MGP_NODShiLtJ_T0058227.1 MGP_NODShiLtJ_G0026551.1 mouse_genomes_project 2 174770048 174771830 + MGP_NODShiLtJ_P0058227 Map1lc3a protein_coding protein_coding MGP_NODShiLtJ_T0058228.1 MGP_NODShiLtJ_G0026551.1 mouse_genomes_project 2 174770294 174771827 + Map1lc3a protein_coding processed_transcript MGP_NODShiLtJ_T0058229.1 MGP_NODShiLtJ_G0026551.1 mouse_genomes_project 2 174770640 174771825 + Map1lc3a protein_coding processed_transcript MGP_NODShiLtJ_T0007106.1 MGP_NODShiLtJ_G0005821.1 mouse_genomes_project 2 25914421 25919371 - Gm13553 lincRNA lincRNA MGP_NODShiLtJ_T0013750.1 MGP_NODShiLtJ_G0011858.1 mouse_genomes_project 2 188318908 188319384 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013511.1 MGP_NODShiLtJ_G0011619.1 mouse_genomes_project 2 90927734 90928263 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001018.1 MGP_NODShiLtJ_G0000944.1 mouse_genomes_project 2 11287085 11288958 - TEC TEC MGP_NODShiLtJ_T0058142.1 MGP_NODShiLtJ_G0026530.1 mouse_genomes_project 2 173592286 173609939 + MGP_NODShiLtJ_P0058142 Bpifb5 protein_coding protein_coding MGP_NODShiLtJ_T0055454.1 MGP_NODShiLtJ_G0025789.1 mouse_genomes_project 2 95258227 95259172 - MGP_NODShiLtJ_P0055454 Olfr1043 protein_coding protein_coding MGP_NODShiLtJ_T0017648.1 MGP_NODShiLtJ_G0015303.1 mouse_genomes_project 2 92374552 92398625 - Gm13684 processed_transcript processed_transcript MGP_NODShiLtJ_T0007263.1 MGP_NODShiLtJ_G0005947.1 mouse_genomes_project 2 142841216 142880452 - Gm26697 lincRNA lincRNA MGP_NODShiLtJ_T0004085.1 MGP_NODShiLtJ_G0003608.1 mouse_genomes_project 2 175907434 175914467 - Gm14252 antisense antisense MGP_NODShiLtJ_T0052737.1 MGP_NODShiLtJ_G0025267.1 mouse_genomes_project 2 24880187 24881358 - MGP_NODShiLtJ_P0052737 Cysrt1 protein_coding protein_coding MGP_NODShiLtJ_T0052738.1 MGP_NODShiLtJ_G0025267.1 mouse_genomes_project 2 24880358 24881267 - MGP_NODShiLtJ_P0052738 Cysrt1 protein_coding protein_coding MGP_NODShiLtJ_T0052739.1 MGP_NODShiLtJ_G0025267.1 mouse_genomes_project 2 24880526 24883821 - MGP_NODShiLtJ_P0052739 Cysrt1 protein_coding protein_coding MGP_NODShiLtJ_T0054501.1 MGP_NODShiLtJ_G0025578.1 mouse_genomes_project 2 59902333 60124241 + MGP_NODShiLtJ_P0054501 Kcnj3 protein_coding protein_coding MGP_NODShiLtJ_T0054502.1 MGP_NODShiLtJ_G0025578.1 mouse_genomes_project 2 59903519 60121165 + MGP_NODShiLtJ_P0054502 Kcnj3 protein_coding protein_coding MGP_NODShiLtJ_T0054503.1 MGP_NODShiLtJ_G0025578.1 mouse_genomes_project 2 59903528 60124236 + MGP_NODShiLtJ_P0054503 Kcnj3 protein_coding protein_coding MGP_NODShiLtJ_T0056315.1 MGP_NODShiLtJ_G0026070.1 mouse_genomes_project 2 124892761 125280423 - MGP_NODShiLtJ_P0056315 Ano3 protein_coding protein_coding MGP_NODShiLtJ_T0056316.1 MGP_NODShiLtJ_G0026070.1 mouse_genomes_project 2 124932576 125279862 - Ano3 protein_coding retained_intron MGP_NODShiLtJ_T0056317.1 MGP_NODShiLtJ_G0026070.1 mouse_genomes_project 2 124962059 125029655 - MGP_NODShiLtJ_P0056317 Ano3 protein_coding protein_coding MGP_NODShiLtJ_T0058517.1 MGP_NODShiLtJ_G0026595.1 mouse_genomes_project 2 176727791 176738003 + MGP_NODShiLtJ_P0058517 Tldc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058518.1 MGP_NODShiLtJ_G0026595.1 mouse_genomes_project 2 176729503 176737533 + MGP_NODShiLtJ_P0058518 Tldc2 protein_coding protein_coding MGP_NODShiLtJ_T0054071.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35381267 35403821 - MGP_NODShiLtJ_P0054071 Traf1 protein_coding protein_coding MGP_NODShiLtJ_T0054072.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35382769 35407241 - MGP_NODShiLtJ_P0054072 Traf1 protein_coding protein_coding MGP_NODShiLtJ_T0054073.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35382771 35407428 - MGP_NODShiLtJ_P0054073 Traf1 protein_coding protein_coding MGP_NODShiLtJ_T0054074.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35388258 35407238 - Traf1 protein_coding processed_transcript MGP_NODShiLtJ_T0054075.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35401730 35403794 - MGP_NODShiLtJ_P0054075 Traf1 protein_coding protein_coding MGP_NODShiLtJ_T0054076.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35401839 35403819 - Traf1 protein_coding retained_intron MGP_NODShiLtJ_T0054077.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35401851 35404563 - Traf1 protein_coding processed_transcript MGP_NODShiLtJ_T0054078.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35403204 35407253 - Traf1 protein_coding retained_intron MGP_NODShiLtJ_T0054079.1 MGP_NODShiLtJ_G0025484.1 mouse_genomes_project 2 35403809 35407218 - Traf1 protein_coding processed_transcript MGP_NODShiLtJ_T0059219.1 MGP_NODShiLtJ_G0026757.1 mouse_genomes_project 2 193178158 193185397 - MGP_NODShiLtJ_P0059219 Cbln4 protein_coding protein_coding MGP_NODShiLtJ_T0052346.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12261785 12321430 + MGP_NODShiLtJ_P0052346 Stam protein_coding protein_coding MGP_NODShiLtJ_T0052347.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12261795 12298282 + Stam protein_coding processed_transcript MGP_NODShiLtJ_T0052348.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12261876 12313973 + MGP_NODShiLtJ_P0052348 Stam protein_coding protein_coding MGP_NODShiLtJ_T0052349.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12261909 12317148 + MGP_NODShiLtJ_P0052349 Stam protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052350.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12262114 12298742 + MGP_NODShiLtJ_P0052350 Stam protein_coding protein_coding MGP_NODShiLtJ_T0052351.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12298033 12298837 + Stam protein_coding retained_intron MGP_NODShiLtJ_T0052352.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12298715 12301059 + Stam protein_coding processed_transcript MGP_NODShiLtJ_T0052353.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12300512 12308790 + Stam protein_coding retained_intron MGP_NODShiLtJ_T0052354.1 MGP_NODShiLtJ_G0025198.1 mouse_genomes_project 2 12303790 12308732 + Stam protein_coding retained_intron MGP_NODShiLtJ_T0058799.1 MGP_NODShiLtJ_G0026659.1 mouse_genomes_project 2 184464578 184465957 - MGP_NODShiLtJ_P0058799 Wfdc12 protein_coding protein_coding MGP_NODShiLtJ_T0058800.1 MGP_NODShiLtJ_G0026660.1 mouse_genomes_project 2 184474204 184475472 - MGP_NODShiLtJ_P0058800 Wfdc15a protein_coding protein_coding MGP_NODShiLtJ_T0013425.1 MGP_NODShiLtJ_G0011533.1 mouse_genomes_project 2 57536155 57537140 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055085.1 MGP_NODShiLtJ_G0025685.1 mouse_genomes_project 2 81975037 81978191 + MGP_NODShiLtJ_P0055085 Hoxd10 protein_coding protein_coding MGP_NODShiLtJ_T0057361.1 MGP_NODShiLtJ_G0026324.1 mouse_genomes_project 2 147127545 147129190 + Mrps26 protein_coding retained_intron MGP_NODShiLtJ_T0057362.1 MGP_NODShiLtJ_G0026324.1 mouse_genomes_project 2 147127545 147132275 + MGP_NODShiLtJ_P0057362 Mrps26 protein_coding protein_coding MGP_NODShiLtJ_T0013611.1 MGP_NODShiLtJ_G0011719.1 mouse_genomes_project 2 127203748 127207013 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101810.1 MGP_NODShiLtJ_G0039978.1 mouse_genomes_project 2 95601594 95602591 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0058641.1 MGP_NODShiLtJ_G0026620.1 mouse_genomes_project 2 178566263 178584808 + MGP_NODShiLtJ_P0058641 Fam83d protein_coding protein_coding MGP_NODShiLtJ_T0058642.1 MGP_NODShiLtJ_G0026620.1 mouse_genomes_project 2 178579578 178584808 + Fam83d protein_coding retained_intron MGP_NODShiLtJ_T0054205.1 MGP_NODShiLtJ_G0025526.1 mouse_genomes_project 2 37873682 37874914 + MGP_NODShiLtJ_P0054205 protein_coding protein_coding MGP_NODShiLtJ_T0052926.1 MGP_NODShiLtJ_G0025301.1 mouse_genomes_project 2 25336600 25340150 + MGP_NODShiLtJ_P0052926 Lcn5 protein_coding protein_coding MGP_NODShiLtJ_T0052927.1 MGP_NODShiLtJ_G0025301.1 mouse_genomes_project 2 25336603 25340294 + MGP_NODShiLtJ_P0052927 Lcn5 protein_coding protein_coding MGP_NODShiLtJ_T0052928.1 MGP_NODShiLtJ_G0025301.1 mouse_genomes_project 2 25336603 25340626 + MGP_NODShiLtJ_P0052928 Lcn5 protein_coding protein_coding MGP_NODShiLtJ_T0052929.1 MGP_NODShiLtJ_G0025301.1 mouse_genomes_project 2 25339570 25340290 + Lcn5 protein_coding processed_transcript MGP_NODShiLtJ_T0013558.1 MGP_NODShiLtJ_G0011666.1 mouse_genomes_project 2 107045164 107045284 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058089.1 MGP_NODShiLtJ_G0026513.1 mouse_genomes_project 2 172650123 172783148 - MGP_NODShiLtJ_P0058089 Nol4l protein_coding protein_coding MGP_NODShiLtJ_T0058090.1 MGP_NODShiLtJ_G0026513.1 mouse_genomes_project 2 172661406 172695103 - Nol4l protein_coding processed_transcript MGP_NODShiLtJ_T0058091.1 MGP_NODShiLtJ_G0026513.1 mouse_genomes_project 2 172703896 172734194 - Nol4l protein_coding processed_transcript MGP_NODShiLtJ_T0058092.1 MGP_NODShiLtJ_G0026513.1 mouse_genomes_project 2 172709771 172742812 - Nol4l protein_coding processed_transcript MGP_NODShiLtJ_T0058093.1 MGP_NODShiLtJ_G0026513.1 mouse_genomes_project 2 172713626 172730307 - Nol4l protein_coding processed_transcript MGP_NODShiLtJ_T0013369.1 MGP_NODShiLtJ_G0011477.1 mouse_genomes_project 2 34829833 34830089 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053490.1 MGP_NODShiLtJ_G0025400.1 mouse_genomes_project 2 30323724 30343573 + MGP_NODShiLtJ_P0053490 protein_coding protein_coding MGP_NODShiLtJ_T0058849.1 MGP_NODShiLtJ_G0026676.1 mouse_genomes_project 2 184881279 184884552 - MGP_NODShiLtJ_P0058849 Spint3 protein_coding protein_coding MGP_NODShiLtJ_T0057309.1 MGP_NODShiLtJ_G0026313.1 mouse_genomes_project 2 146738993 146811363 + MGP_NODShiLtJ_P0057309 Tmc2 protein_coding protein_coding MGP_NODShiLtJ_T0057310.1 MGP_NODShiLtJ_G0026313.1 mouse_genomes_project 2 146740342 146811135 + MGP_NODShiLtJ_P0057310 Tmc2 protein_coding protein_coding MGP_NODShiLtJ_T0059072.1 MGP_NODShiLtJ_G0026724.1 mouse_genomes_project 2 187655499 187677198 + MGP_NODShiLtJ_P0059072 Ddx27 protein_coding protein_coding MGP_NODShiLtJ_T0059073.1 MGP_NODShiLtJ_G0026724.1 mouse_genomes_project 2 187655616 187667775 + MGP_NODShiLtJ_P0059073 Ddx27 protein_coding protein_coding MGP_NODShiLtJ_T0059074.1 MGP_NODShiLtJ_G0026724.1 mouse_genomes_project 2 187655616 187666495 + MGP_NODShiLtJ_P0059074 Ddx27 protein_coding protein_coding MGP_NODShiLtJ_T0059075.1 MGP_NODShiLtJ_G0026724.1 mouse_genomes_project 2 187668162 187669824 + Ddx27 protein_coding retained_intron MGP_NODShiLtJ_T0059076.1 MGP_NODShiLtJ_G0026724.1 mouse_genomes_project 2 187669503 187670252 + Ddx27 protein_coding retained_intron MGP_NODShiLtJ_T0059077.1 MGP_NODShiLtJ_G0026724.1 mouse_genomes_project 2 187676097 187677154 + Ddx27 protein_coding retained_intron MGP_NODShiLtJ_T0055479.1 MGP_NODShiLtJ_G0025814.1 mouse_genomes_project 2 96220310 96221279 + MGP_NODShiLtJ_P0055479 Olfr1093 protein_coding protein_coding MGP_NODShiLtJ_T0003991.1 MGP_NODShiLtJ_G0003540.1 mouse_genomes_project 2 118419185 118433449 - Wt1os antisense antisense MGP_NODShiLtJ_T0003992.1 MGP_NODShiLtJ_G0003540.1 mouse_genomes_project 2 118419508 118473350 - Wt1os antisense antisense MGP_NODShiLtJ_T0003993.1 MGP_NODShiLtJ_G0003540.1 mouse_genomes_project 2 118420558 118420759 - Wt1os antisense antisense MGP_NODShiLtJ_T0003994.1 MGP_NODShiLtJ_G0003540.1 mouse_genomes_project 2 118437253 118473243 - Wt1os antisense antisense MGP_NODShiLtJ_T0007236.1 MGP_NODShiLtJ_G0005927.1 mouse_genomes_project 2 130230193 130232430 + Gm28493 lincRNA lincRNA MGP_NODShiLtJ_T0052768.1 MGP_NODShiLtJ_G0025274.1 mouse_genomes_project 2 24928642 24929685 + MGP_NODShiLtJ_P0052768 Tmem210 protein_coding protein_coding MGP_NODShiLtJ_T0052769.1 MGP_NODShiLtJ_G0025274.1 mouse_genomes_project 2 24928698 24929687 + Tmem210 protein_coding processed_transcript MGP_NODShiLtJ_T0007308.1 MGP_NODShiLtJ_G0005983.1 mouse_genomes_project 2 174581614 174583904 - 2310005A03Rik lincRNA lincRNA MGP_NODShiLtJ_T0053667.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31730126 31774828 + MGP_NODShiLtJ_P0053667 Fubp3 protein_coding protein_coding MGP_NODShiLtJ_T0053668.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31730268 31752730 + MGP_NODShiLtJ_P0053668 Fubp3 protein_coding protein_coding MGP_NODShiLtJ_T0053669.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31730269 31742379 + Fubp3 protein_coding retained_intron MGP_NODShiLtJ_T0053670.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31730291 31756021 + MGP_NODShiLtJ_P0053670 Fubp3 protein_coding protein_coding MGP_NODShiLtJ_T0053671.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31730294 31774821 + MGP_NODShiLtJ_P0053671 Fubp3 protein_coding protein_coding MGP_NODShiLtJ_T0053672.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31730304 31756007 + MGP_NODShiLtJ_P0053672 Fubp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053673.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31760729 31770541 + MGP_NODShiLtJ_P0053673 Fubp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053674.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31762164 31773366 + MGP_NODShiLtJ_P0053674 Fubp3 protein_coding protein_coding MGP_NODShiLtJ_T0053675.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31769964 31774018 + MGP_NODShiLtJ_P0053675 Fubp3 protein_coding protein_coding MGP_NODShiLtJ_T0053676.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31772194 31774820 + MGP_NODShiLtJ_P0053676 Fubp3 protein_coding protein_coding MGP_NODShiLtJ_T0053677.1 MGP_NODShiLtJ_G0025424.1 mouse_genomes_project 2 31772612 31774822 + Fubp3 protein_coding retained_intron MGP_NODShiLtJ_T0054066.1 MGP_NODShiLtJ_G0025483.1 mouse_genomes_project 2 35335298 35356322 - MGP_NODShiLtJ_P0054066 Phf19 protein_coding protein_coding MGP_NODShiLtJ_T0054067.1 MGP_NODShiLtJ_G0025483.1 mouse_genomes_project 2 35335325 35345692 - Phf19 protein_coding processed_transcript MGP_NODShiLtJ_T0054068.1 MGP_NODShiLtJ_G0025483.1 mouse_genomes_project 2 35339623 35346447 - Phf19 protein_coding processed_transcript MGP_NODShiLtJ_T0054069.1 MGP_NODShiLtJ_G0025483.1 mouse_genomes_project 2 35340510 35356372 - Phf19 protein_coding retained_intron MGP_NODShiLtJ_T0054070.1 MGP_NODShiLtJ_G0025483.1 mouse_genomes_project 2 35349446 35356363 - MGP_NODShiLtJ_P0054070 Phf19 protein_coding protein_coding MGP_NODShiLtJ_T0100417.1 MGP_NODShiLtJ_G0038811.1 mouse_genomes_project 2 178130012 178130144 - Gm23925 snoRNA snoRNA MGP_NODShiLtJ_T0055044.1 MGP_NODShiLtJ_G0025677.1 mouse_genomes_project 2 80792031 80840116 - MGP_NODShiLtJ_P0055044 Chn1 protein_coding protein_coding MGP_NODShiLtJ_T0055045.1 MGP_NODShiLtJ_G0025677.1 mouse_genomes_project 2 80792039 80962303 - MGP_NODShiLtJ_P0055045 Chn1 protein_coding protein_coding MGP_NODShiLtJ_T0055046.1 MGP_NODShiLtJ_G0025677.1 mouse_genomes_project 2 80792039 80962303 - MGP_NODShiLtJ_P0055046 Chn1 protein_coding protein_coding MGP_NODShiLtJ_T0055047.1 MGP_NODShiLtJ_G0025677.1 mouse_genomes_project 2 80794463 80906824 - MGP_NODShiLtJ_P0055047 Chn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055048.1 MGP_NODShiLtJ_G0025677.1 mouse_genomes_project 2 80807244 80835243 - MGP_NODShiLtJ_P0055048 Chn1 protein_coding protein_coding MGP_NODShiLtJ_T0055049.1 MGP_NODShiLtJ_G0025677.1 mouse_genomes_project 2 80807962 80962283 - MGP_NODShiLtJ_P0055049 Chn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055050.1 MGP_NODShiLtJ_G0025677.1 mouse_genomes_project 2 80861036 80961998 - MGP_NODShiLtJ_P0055050 Chn1 protein_coding protein_coding MGP_NODShiLtJ_T0003970.1 MGP_NODShiLtJ_G0003526.1 mouse_genomes_project 2 82488707 82679154 + 2600014E21Rik antisense antisense MGP_NODShiLtJ_T0057843.1 MGP_NODShiLtJ_G0026438.1 mouse_genomes_project 2 168227660 168231203 + MGP_NODShiLtJ_P0057843 Cst10 protein_coding protein_coding MGP_NODShiLtJ_T0057844.1 MGP_NODShiLtJ_G0026438.1 mouse_genomes_project 2 168227852 168231203 + MGP_NODShiLtJ_P0057844 Cst10 protein_coding protein_coding MGP_NODShiLtJ_T0057845.1 MGP_NODShiLtJ_G0026438.1 mouse_genomes_project 2 168227936 168231203 + MGP_NODShiLtJ_P0057845 Cst10 protein_coding protein_coding MGP_NODShiLtJ_T0056911.1 MGP_NODShiLtJ_G0026211.1 mouse_genomes_project 2 137175579 137182146 + MGP_NODShiLtJ_P0056911 Hypk protein_coding protein_coding MGP_NODShiLtJ_T0056912.1 MGP_NODShiLtJ_G0026211.1 mouse_genomes_project 2 137180331 137182072 + Hypk protein_coding retained_intron MGP_NODShiLtJ_T0056913.1 MGP_NODShiLtJ_G0026211.1 mouse_genomes_project 2 137180601 137182308 + MGP_NODShiLtJ_P0056913 Hypk protein_coding protein_coding MGP_NODShiLtJ_T0056914.1 MGP_NODShiLtJ_G0026211.1 mouse_genomes_project 2 137180762 137181945 + Hypk protein_coding retained_intron MGP_NODShiLtJ_T0056915.1 MGP_NODShiLtJ_G0026211.1 mouse_genomes_project 2 137180772 137181999 + Hypk protein_coding processed_transcript MGP_NODShiLtJ_T0013594.1 MGP_NODShiLtJ_G0011702.1 mouse_genomes_project 2 122252170 122252798 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056324.1 MGP_NODShiLtJ_G0026075.1 mouse_genomes_project 2 125800926 125804868 + MGP_NODShiLtJ_P0056324 Olfr1278 protein_coding protein_coding MGP_NODShiLtJ_T0056523.1 MGP_NODShiLtJ_G0026143.1 mouse_genomes_project 2 134439411 134441501 + MGP_NODShiLtJ_P0056523 Chst14 protein_coding protein_coding MGP_NODShiLtJ_T0056524.1 MGP_NODShiLtJ_G0026143.1 mouse_genomes_project 2 134439429 134441495 + MGP_NODShiLtJ_P0056524 Chst14 protein_coding protein_coding MGP_NODShiLtJ_T0057606.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153699738 153713443 + Ankef1 protein_coding processed_transcript MGP_NODShiLtJ_T0057607.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153699783 153704576 + Ankef1 protein_coding processed_transcript MGP_NODShiLtJ_T0057608.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153699819 153753371 + MGP_NODShiLtJ_P0057608 Ankef1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057609.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153700009 153712142 + Ankef1 protein_coding processed_transcript MGP_NODShiLtJ_T0057610.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153713442 153758587 + MGP_NODShiLtJ_P0057610 Ankef1 protein_coding protein_coding MGP_NODShiLtJ_T0057611.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153713446 153752146 + MGP_NODShiLtJ_P0057611 Ankef1 protein_coding protein_coding MGP_NODShiLtJ_T0057612.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153734295 153764850 + MGP_NODShiLtJ_P0057612 Ankef1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057613.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153734363 153758724 + MGP_NODShiLtJ_P0057613 Ankef1 protein_coding protein_coding MGP_NODShiLtJ_T0057614.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153754901 153755697 + Ankef1 protein_coding processed_transcript MGP_NODShiLtJ_T0057615.1 MGP_NODShiLtJ_G0026375.1 mouse_genomes_project 2 153754916 153758647 + Ankef1 protein_coding processed_transcript MGP_NODShiLtJ_T0010376.1 MGP_NODShiLtJ_G0008509.1 mouse_genomes_project 2 183284957 183285082 + Gm22174 miRNA miRNA MGP_NODShiLtJ_T0059455.1 MGP_NODShiLtJ_G0026821.1 mouse_genomes_project 2 202488879 202493871 + Birc7 protein_coding retained_intron MGP_NODShiLtJ_T0059456.1 MGP_NODShiLtJ_G0026821.1 mouse_genomes_project 2 202488879 202493874 + MGP_NODShiLtJ_P0059456 Birc7 protein_coding protein_coding MGP_NODShiLtJ_T0101101.1 MGP_NODShiLtJ_G0039449.1 mouse_genomes_project 2 118910754 118911144 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0059222.1 MGP_NODShiLtJ_G0026760.1 mouse_genomes_project 2 193532933 193547275 - MGP_NODShiLtJ_P0059222 Aurka protein_coding protein_coding MGP_NODShiLtJ_T0059223.1 MGP_NODShiLtJ_G0026760.1 mouse_genomes_project 2 193532939 193547246 - MGP_NODShiLtJ_P0059223 Aurka protein_coding protein_coding MGP_NODShiLtJ_T0059224.1 MGP_NODShiLtJ_G0026760.1 mouse_genomes_project 2 193533909 193539873 - Aurka protein_coding retained_intron MGP_NODShiLtJ_T0059225.1 MGP_NODShiLtJ_G0026760.1 mouse_genomes_project 2 193543290 193547261 - Aurka protein_coding retained_intron MGP_NODShiLtJ_T0059089.1 MGP_NODShiLtJ_G0026727.1 mouse_genomes_project 2 187753812 187844343 - MGP_NODShiLtJ_P0059089 Kcnb1 protein_coding protein_coding MGP_NODShiLtJ_T0003950.1 MGP_NODShiLtJ_G0003514.1 mouse_genomes_project 2 79281581 79289183 - Rapgef4os2 antisense antisense MGP_NODShiLtJ_T0101809.1 MGP_NODShiLtJ_G0039977.1 mouse_genomes_project 2 95350120 95413887 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0054638.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67012012 67107776 + MGP_NODShiLtJ_P0054638 Tank protein_coding protein_coding MGP_NODShiLtJ_T0054639.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67012013 67107776 + MGP_NODShiLtJ_P0054639 Tank protein_coding protein_coding MGP_NODShiLtJ_T0054640.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67012038 67107695 + Tank protein_coding processed_transcript MGP_NODShiLtJ_T0054641.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67012038 67096581 + Tank protein_coding processed_transcript MGP_NODShiLtJ_T0054642.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67039184 67107776 + MGP_NODShiLtJ_P0054642 Tank protein_coding protein_coding MGP_NODShiLtJ_T0054643.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67039204 67107776 + MGP_NODShiLtJ_P0054643 Tank protein_coding protein_coding MGP_NODShiLtJ_T0054644.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67039243 67104074 + MGP_NODShiLtJ_P0054644 Tank protein_coding protein_coding MGP_NODShiLtJ_T0054645.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67039271 67064617 + Tank protein_coding processed_transcript MGP_NODShiLtJ_T0054646.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67039272 67107695 + Tank protein_coding processed_transcript MGP_NODShiLtJ_T0054647.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67077429 67098465 + Tank protein_coding processed_transcript MGP_NODShiLtJ_T0054648.1 MGP_NODShiLtJ_G0025601.1 mouse_genomes_project 2 67096504 67102252 + Tank protein_coding processed_transcript MGP_NODShiLtJ_T0011384.1 MGP_NODShiLtJ_G0009517.1 mouse_genomes_project 2 41745223 41745393 - Gm27348 misc_RNA misc_RNA MGP_NODShiLtJ_T0058166.1 MGP_NODShiLtJ_G0026536.1 mouse_genomes_project 2 173961703 173977480 - MGP_NODShiLtJ_P0058166 Necab3 protein_coding protein_coding MGP_NODShiLtJ_T0058167.1 MGP_NODShiLtJ_G0026536.1 mouse_genomes_project 2 173961703 173977495 - MGP_NODShiLtJ_P0058167 Necab3 protein_coding protein_coding MGP_NODShiLtJ_T0058168.1 MGP_NODShiLtJ_G0026536.1 mouse_genomes_project 2 173962349 173964099 - Necab3 protein_coding retained_intron MGP_NODShiLtJ_T0058169.1 MGP_NODShiLtJ_G0026536.1 mouse_genomes_project 2 173964350 173977519 - MGP_NODShiLtJ_P0058169 Necab3 protein_coding protein_coding MGP_NODShiLtJ_T0058171.1 MGP_NODShiLtJ_G0026536.1 mouse_genomes_project 2 173964445 173977473 - Necab3 protein_coding processed_transcript MGP_NODShiLtJ_T0058175.1 MGP_NODShiLtJ_G0026536.1 mouse_genomes_project 2 173972919 173977481 - Necab3 protein_coding retained_intron MGP_NODShiLtJ_T0058176.1 MGP_NODShiLtJ_G0026536.1 mouse_genomes_project 2 173973297 173975908 - Necab3 protein_coding retained_intron MGP_NODShiLtJ_T0058844.1 MGP_NODShiLtJ_G0026675.1 mouse_genomes_project 2 184874004 184875141 + Wfdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0058845.1 MGP_NODShiLtJ_G0026675.1 mouse_genomes_project 2 184874170 184880099 + MGP_NODShiLtJ_P0058845 Wfdc2 protein_coding protein_coding MGP_NODShiLtJ_T0058846.1 MGP_NODShiLtJ_G0026675.1 mouse_genomes_project 2 184874290 184880099 + MGP_NODShiLtJ_P0058846 Wfdc2 protein_coding protein_coding MGP_NODShiLtJ_T0058847.1 MGP_NODShiLtJ_G0026675.1 mouse_genomes_project 2 184874305 184880099 + MGP_NODShiLtJ_P0058847 Wfdc2 protein_coding protein_coding MGP_NODShiLtJ_T0058848.1 MGP_NODShiLtJ_G0026675.1 mouse_genomes_project 2 184874610 184875774 + MGP_NODShiLtJ_P0058848 Wfdc2 protein_coding protein_coding MGP_NODShiLtJ_T0017594.1 MGP_NODShiLtJ_G0015268.1 mouse_genomes_project 2 18363495 18364819 + 1810010K12Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017595.1 MGP_NODShiLtJ_G0015268.1 mouse_genomes_project 2 18364137 18366663 + 1810010K12Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0058750.1 MGP_NODShiLtJ_G0026645.1 mouse_genomes_project 2 183722390 183766776 + MGP_NODShiLtJ_P0058750 Hnf4a protein_coding protein_coding MGP_NODShiLtJ_T0058751.1 MGP_NODShiLtJ_G0026645.1 mouse_genomes_project 2 183759545 183777171 + Hnf4a protein_coding processed_transcript MGP_NODShiLtJ_T0058752.1 MGP_NODShiLtJ_G0026645.1 mouse_genomes_project 2 183759911 183791993 + MGP_NODShiLtJ_P0058752 Hnf4a protein_coding protein_coding MGP_NODShiLtJ_T0058753.1 MGP_NODShiLtJ_G0026645.1 mouse_genomes_project 2 183759912 183791988 + MGP_NODShiLtJ_P0058753 Hnf4a protein_coding protein_coding MGP_NODShiLtJ_T0058754.1 MGP_NODShiLtJ_G0026645.1 mouse_genomes_project 2 183762806 183777170 + MGP_NODShiLtJ_P0058754 Hnf4a protein_coding protein_coding MGP_NODShiLtJ_T0013648.1 MGP_NODShiLtJ_G0011756.1 mouse_genomes_project 2 147983799 147984078 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056768.1 MGP_NODShiLtJ_G0026190.1 mouse_genomes_project 2 136410920 136523821 - MGP_NODShiLtJ_P0056768 Ttbk2 protein_coding protein_coding MGP_NODShiLtJ_T0056769.1 MGP_NODShiLtJ_G0026190.1 mouse_genomes_project 2 136410920 136523635 - MGP_NODShiLtJ_P0056769 Ttbk2 protein_coding protein_coding MGP_NODShiLtJ_T0056770.1 MGP_NODShiLtJ_G0026190.1 mouse_genomes_project 2 136410920 136523621 - MGP_NODShiLtJ_P0056770 Ttbk2 protein_coding protein_coding MGP_NODShiLtJ_T0056771.1 MGP_NODShiLtJ_G0026190.1 mouse_genomes_project 2 136423764 136523605 - MGP_NODShiLtJ_P0056771 Ttbk2 protein_coding protein_coding MGP_NODShiLtJ_T0056772.1 MGP_NODShiLtJ_G0026190.1 mouse_genomes_project 2 136428987 136523579 - MGP_NODShiLtJ_P0056772 Ttbk2 protein_coding protein_coding MGP_NODShiLtJ_T0056773.1 MGP_NODShiLtJ_G0026190.1 mouse_genomes_project 2 136471591 136523652 - Ttbk2 protein_coding processed_transcript MGP_NODShiLtJ_T0059190.1 MGP_NODShiLtJ_G0026749.1 mouse_genomes_project 2 190515474 190521525 - MGP_NODShiLtJ_P0059190 Gm11011 protein_coding protein_coding MGP_NODShiLtJ_T0055597.1 MGP_NODShiLtJ_G0025919.1 mouse_genomes_project 2 99715544 99716486 - MGP_NODShiLtJ_P0055597 Olfr1231 protein_coding protein_coding MGP_NODShiLtJ_T0059270.1 MGP_NODShiLtJ_G0026774.1 mouse_genomes_project 2 194485224 194542460 - MGP_NODShiLtJ_P0059270 Pmepa1 protein_coding protein_coding MGP_NODShiLtJ_T0059271.1 MGP_NODShiLtJ_G0026774.1 mouse_genomes_project 2 194488812 194542116 - MGP_NODShiLtJ_P0059271 Pmepa1 protein_coding protein_coding MGP_NODShiLtJ_T0059272.1 MGP_NODShiLtJ_G0026774.1 mouse_genomes_project 2 194488977 194495495 - Pmepa1 protein_coding retained_intron MGP_NODShiLtJ_T0007181.1 MGP_NODShiLtJ_G0005881.1 mouse_genomes_project 2 82037226 82038287 + Gm14424 lincRNA lincRNA MGP_NODShiLtJ_T0054232.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38212320 38394130 - MGP_NODShiLtJ_P0054232 Strbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054238.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38301795 38394196 - MGP_NODShiLtJ_P0054238 Strbp protein_coding protein_coding MGP_NODShiLtJ_T0054239.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38301948 38325910 - Strbp protein_coding processed_transcript MGP_NODShiLtJ_T0054240.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38311517 38318482 - MGP_NODShiLtJ_P0054240 Strbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054241.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38315134 38463473 - MGP_NODShiLtJ_P0054241 Strbp protein_coding protein_coding MGP_NODShiLtJ_T0054242.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38371683 38463546 - Strbp protein_coding processed_transcript MGP_NODShiLtJ_T0054243.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38372787 38407892 - MGP_NODShiLtJ_P0054243 Strbp protein_coding protein_coding MGP_NODShiLtJ_T0054244.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38378979 38464057 - MGP_NODShiLtJ_P0054244 Strbp protein_coding protein_coding MGP_NODShiLtJ_T0054245.1 MGP_NODShiLtJ_G0025534.1 mouse_genomes_project 2 38394030 38463347 - Strbp protein_coding processed_transcript MGP_NODShiLtJ_T0100363.1 MGP_NODShiLtJ_G0038757.1 mouse_genomes_project 2 49098019 49098142 + Gm23072 snoRNA snoRNA MGP_NODShiLtJ_T0007321.1 MGP_NODShiLtJ_G0005994.1 mouse_genomes_project 2 181196554 181239117 + Gm14243 lincRNA lincRNA MGP_NODShiLtJ_T0017613.1 MGP_NODShiLtJ_G0015279.1 mouse_genomes_project 2 30348556 30369153 - Gm14471 processed_transcript processed_transcript MGP_NODShiLtJ_T0057382.1 MGP_NODShiLtJ_G0026332.1 mouse_genomes_project 2 147263774 147268230 - Slc4a11 protein_coding retained_intron MGP_NODShiLtJ_T0057383.1 MGP_NODShiLtJ_G0026332.1 mouse_genomes_project 2 147263774 147281510 - MGP_NODShiLtJ_P0057383 Slc4a11 protein_coding protein_coding MGP_NODShiLtJ_T0057384.1 MGP_NODShiLtJ_G0026332.1 mouse_genomes_project 2 147266240 147281460 - Slc4a11 protein_coding retained_intron MGP_NODShiLtJ_T0057385.1 MGP_NODShiLtJ_G0026332.1 mouse_genomes_project 2 147273120 147274270 - Slc4a11 protein_coding retained_intron MGP_NODShiLtJ_T0057386.1 MGP_NODShiLtJ_G0026332.1 mouse_genomes_project 2 147273836 147281460 - MGP_NODShiLtJ_P0057386 Slc4a11 protein_coding protein_coding MGP_NODShiLtJ_T0058182.1 MGP_NODShiLtJ_G0026542.1 mouse_genomes_project 2 174038040 174079687 + MGP_NODShiLtJ_P0058182 Zfp341 protein_coding protein_coding MGP_NODShiLtJ_T0058183.1 MGP_NODShiLtJ_G0026542.1 mouse_genomes_project 2 174038099 174079644 + MGP_NODShiLtJ_P0058183 Zfp341 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058184.1 MGP_NODShiLtJ_G0026542.1 mouse_genomes_project 2 174038113 174079644 + MGP_NODShiLtJ_P0058184 Zfp341 protein_coding protein_coding MGP_NODShiLtJ_T0058185.1 MGP_NODShiLtJ_G0026542.1 mouse_genomes_project 2 174038115 174079675 + MGP_NODShiLtJ_P0058185 Zfp341 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052696.1 MGP_NODShiLtJ_G0025257.1 mouse_genomes_project 2 24713496 24715308 + Entpd8 protein_coding retained_intron MGP_NODShiLtJ_T0052697.1 MGP_NODShiLtJ_G0025257.1 mouse_genomes_project 2 24713514 24718909 + MGP_NODShiLtJ_P0052697 Entpd8 protein_coding protein_coding MGP_NODShiLtJ_T0052698.1 MGP_NODShiLtJ_G0025257.1 mouse_genomes_project 2 24713517 24718909 + MGP_NODShiLtJ_P0052698 Entpd8 protein_coding protein_coding MGP_NODShiLtJ_T0052699.1 MGP_NODShiLtJ_G0025257.1 mouse_genomes_project 2 24713701 24718908 + Entpd8 protein_coding retained_intron MGP_NODShiLtJ_T0052700.1 MGP_NODShiLtJ_G0025257.1 mouse_genomes_project 2 24715003 24718345 + Entpd8 protein_coding retained_intron MGP_NODShiLtJ_T0052701.1 MGP_NODShiLtJ_G0025257.1 mouse_genomes_project 2 24715010 24718909 + MGP_NODShiLtJ_P0052701 Entpd8 protein_coding protein_coding MGP_NODShiLtJ_T0052702.1 MGP_NODShiLtJ_G0025257.1 mouse_genomes_project 2 24715225 24716927 + MGP_NODShiLtJ_P0052702 Entpd8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052703.1 MGP_NODShiLtJ_G0025257.1 mouse_genomes_project 2 24717869 24718767 + Entpd8 protein_coding retained_intron MGP_NODShiLtJ_T0101097.1 MGP_NODShiLtJ_G0039446.1 mouse_genomes_project 2 40070943 40075693 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101098.1 MGP_NODShiLtJ_G0039446.1 mouse_genomes_project 2 40074674 40075447 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0017608.1 MGP_NODShiLtJ_G0015275.1 mouse_genomes_project 2 27707024 27711255 - 2810430I11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0001041.1 MGP_NODShiLtJ_G0000967.1 mouse_genomes_project 2 35906618 35907609 - TEC TEC MGP_NODShiLtJ_T0055284.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92359930 92395715 + Itgav protein_coding retained_intron MGP_NODShiLtJ_T0055285.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92359930 92451690 + MGP_NODShiLtJ_P0055285 Itgav protein_coding protein_coding MGP_NODShiLtJ_T0055286.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92359985 92384285 + MGP_NODShiLtJ_P0055286 Itgav protein_coding protein_coding MGP_NODShiLtJ_T0055287.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92359990 92377509 + Itgav protein_coding processed_transcript MGP_NODShiLtJ_T0055288.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92359999 92384713 + Itgav protein_coding retained_intron MGP_NODShiLtJ_T0055289.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92360060 92361323 + Itgav protein_coding processed_transcript MGP_NODShiLtJ_T0055290.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92360088 92451690 + MGP_NODShiLtJ_P0055290 Itgav protein_coding protein_coding MGP_NODShiLtJ_T0055291.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92446873 92449009 + MGP_NODShiLtJ_P0055291 Itgav protein_coding protein_coding MGP_NODShiLtJ_T0055292.1 MGP_NODShiLtJ_G0025729.1 mouse_genomes_project 2 92447944 92451690 + MGP_NODShiLtJ_P0055292 Itgav protein_coding protein_coding MGP_NODShiLtJ_T0057861.1 MGP_NODShiLtJ_G0026446.1 mouse_genomes_project 2 169507429 169515916 + MGP_NODShiLtJ_P0057861 Cst7 protein_coding protein_coding MGP_NODShiLtJ_T0053754.1 MGP_NODShiLtJ_G0025438.1 mouse_genomes_project 2 32510994 32520247 - MGP_NODShiLtJ_P0053754 Swi5 protein_coding protein_coding MGP_NODShiLtJ_T0053755.1 MGP_NODShiLtJ_G0025438.1 mouse_genomes_project 2 32510994 32515043 - MGP_NODShiLtJ_P0053755 Swi5 protein_coding protein_coding MGP_NODShiLtJ_T0053756.1 MGP_NODShiLtJ_G0025438.1 mouse_genomes_project 2 32510994 32520114 - MGP_NODShiLtJ_P0053756 Swi5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053757.1 MGP_NODShiLtJ_G0025438.1 mouse_genomes_project 2 32510994 32520184 - MGP_NODShiLtJ_P0053757 Swi5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053758.1 MGP_NODShiLtJ_G0025438.1 mouse_genomes_project 2 32510994 32520254 - MGP_NODShiLtJ_P0053758 Swi5 protein_coding protein_coding MGP_NODShiLtJ_T0053759.1 MGP_NODShiLtJ_G0025438.1 mouse_genomes_project 2 32511096 32520248 - MGP_NODShiLtJ_P0053759 Swi5 protein_coding protein_coding MGP_NODShiLtJ_T0053760.1 MGP_NODShiLtJ_G0025438.1 mouse_genomes_project 2 32515459 32520210 - Swi5 protein_coding retained_intron MGP_NODShiLtJ_T0055938.1 MGP_NODShiLtJ_G0025994.1 mouse_genomes_project 2 103611020 103626564 + MGP_NODShiLtJ_P0055938 Chst1 protein_coding protein_coding MGP_NODShiLtJ_T0017721.1 MGP_NODShiLtJ_G0015336.1 mouse_genomes_project 2 145539583 145544328 - Gm14022 processed_transcript processed_transcript MGP_NODShiLtJ_T0007122.1 MGP_NODShiLtJ_G0005833.1 mouse_genomes_project 2 34361662 34471006 - C230014O12Rik lincRNA lincRNA MGP_NODShiLtJ_T0007124.1 MGP_NODShiLtJ_G0005833.1 mouse_genomes_project 2 34463306 34471012 - C230014O12Rik lincRNA lincRNA MGP_NODShiLtJ_T0057429.1 MGP_NODShiLtJ_G0026337.1 mouse_genomes_project 2 147690175 147707605 - MGP_NODShiLtJ_P0057429 Siglec1 protein_coding protein_coding MGP_NODShiLtJ_T0057430.1 MGP_NODShiLtJ_G0026337.1 mouse_genomes_project 2 147693009 147707605 - MGP_NODShiLtJ_P0057430 Siglec1 protein_coding protein_coding MGP_NODShiLtJ_T0057431.1 MGP_NODShiLtJ_G0026337.1 mouse_genomes_project 2 147704414 147707605 - MGP_NODShiLtJ_P0057431 Siglec1 protein_coding protein_coding MGP_NODShiLtJ_T0100372.1 MGP_NODShiLtJ_G0038766.1 mouse_genomes_project 2 68516998 68517134 - Gm22020 snoRNA snoRNA MGP_NODShiLtJ_T0013526.1 MGP_NODShiLtJ_G0011634.1 mouse_genomes_project 2 96806260 96811868 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100383.1 MGP_NODShiLtJ_G0038777.1 mouse_genomes_project 2 109109426 109109555 + Gm22313 snoRNA snoRNA MGP_NODShiLtJ_T0056595.1 MGP_NODShiLtJ_G0026164.1 mouse_genomes_project 2 135223608 135239813 - MGP_NODShiLtJ_P0056595 Ndufaf1 protein_coding protein_coding MGP_NODShiLtJ_T0056596.1 MGP_NODShiLtJ_G0026164.1 mouse_genomes_project 2 135236672 135239795 - Ndufaf1 protein_coding processed_transcript MGP_NODShiLtJ_T0056597.1 MGP_NODShiLtJ_G0026164.1 mouse_genomes_project 2 135236852 135239810 - Ndufaf1 protein_coding processed_transcript MGP_NODShiLtJ_T0052570.1 MGP_NODShiLtJ_G0025236.1 mouse_genomes_project 2 22455793 22521324 + MGP_NODShiLtJ_P0052570 4931423N10Rik protein_coding protein_coding MGP_NODShiLtJ_T0052571.1 MGP_NODShiLtJ_G0025236.1 mouse_genomes_project 2 22455814 22518857 + MGP_NODShiLtJ_P0052571 4931423N10Rik protein_coding protein_coding MGP_NODShiLtJ_T0004110.1 MGP_NODShiLtJ_G0003626.1 mouse_genomes_project 2 185271363 185279820 + Zfp335os antisense antisense MGP_NODShiLtJ_T0004111.1 MGP_NODShiLtJ_G0003626.1 mouse_genomes_project 2 185273951 185279430 + Zfp335os antisense antisense MGP_NODShiLtJ_T0055642.1 MGP_NODShiLtJ_G0025952.1 mouse_genomes_project 2 101020419 101021346 - MGP_NODShiLtJ_P0055642 Olfr1272 protein_coding protein_coding MGP_NODShiLtJ_T0057494.1 MGP_NODShiLtJ_G0026349.1 mouse_genomes_project 2 148231240 148247649 - MGP_NODShiLtJ_P0057494 Adra1d protein_coding protein_coding MGP_NODShiLtJ_T0013597.1 MGP_NODShiLtJ_G0011705.1 mouse_genomes_project 2 122628402 122629393 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057857.1 MGP_NODShiLtJ_G0026442.1 mouse_genomes_project 2 169092615 169107184 + MGP_NODShiLtJ_P0057857 protein_coding protein_coding MGP_NODShiLtJ_T0055536.1 MGP_NODShiLtJ_G0025861.1 mouse_genomes_project 2 97918910 97920196 - MGP_NODShiLtJ_P0055536 Olfr1154 protein_coding protein_coding MGP_NODShiLtJ_T0058748.1 MGP_NODShiLtJ_G0026643.1 mouse_genomes_project 2 183682116 183688367 - MGP_NODShiLtJ_P0058748 Fitm2 protein_coding protein_coding MGP_NODShiLtJ_T0003887.1 MGP_NODShiLtJ_G0003465.1 mouse_genomes_project 2 30466636 30468259 + Gm16323 antisense antisense MGP_NODShiLtJ_T0058098.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172920151 172965104 + MGP_NODShiLtJ_P0058098 Dnmt3b protein_coding protein_coding MGP_NODShiLtJ_T0058099.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172920151 172965104 + MGP_NODShiLtJ_P0058099 Dnmt3b protein_coding protein_coding MGP_NODShiLtJ_T0058100.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172920154 172965104 + MGP_NODShiLtJ_P0058100 Dnmt3b protein_coding protein_coding MGP_NODShiLtJ_T0058101.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172920154 172965104 + MGP_NODShiLtJ_P0058101 Dnmt3b protein_coding protein_coding MGP_NODShiLtJ_T0058102.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172920155 172965100 + MGP_NODShiLtJ_P0058102 Dnmt3b protein_coding protein_coding MGP_NODShiLtJ_T0058103.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172920318 172964691 + MGP_NODShiLtJ_P0058103 Dnmt3b protein_coding protein_coding MGP_NODShiLtJ_T0058104.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172920376 172965109 + MGP_NODShiLtJ_P0058104 Dnmt3b protein_coding protein_coding MGP_NODShiLtJ_T0058105.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172936729 172938901 + Dnmt3b protein_coding retained_intron MGP_NODShiLtJ_T0058106.1 MGP_NODShiLtJ_G0026516.1 mouse_genomes_project 2 172940317 172941367 + Dnmt3b protein_coding retained_intron MGP_NODShiLtJ_T0010251.1 MGP_NODShiLtJ_G0008384.1 mouse_genomes_project 2 8357095 8357195 + miRNA miRNA MGP_NODShiLtJ_T0056353.1 MGP_NODShiLtJ_G0026101.1 mouse_genomes_project 2 127028233 127040202 - MGP_NODShiLtJ_P0056353 Nutm1 protein_coding protein_coding MGP_NODShiLtJ_T0059310.1 MGP_NODShiLtJ_G0026783.1 mouse_genomes_project 2 195693619 195711022 - MGP_NODShiLtJ_P0059310 Gm20721 protein_coding protein_coding MGP_NODShiLtJ_T0058636.1 MGP_NODShiLtJ_G0026619.1 mouse_genomes_project 2 178457186 178556957 + Ppp1r16b protein_coding retained_intron MGP_NODShiLtJ_T0058637.1 MGP_NODShiLtJ_G0026619.1 mouse_genomes_project 2 178457186 178564505 + MGP_NODShiLtJ_P0058637 Ppp1r16b protein_coding protein_coding MGP_NODShiLtJ_T0058638.1 MGP_NODShiLtJ_G0026619.1 mouse_genomes_project 2 178458521 178564505 + MGP_NODShiLtJ_P0058638 Ppp1r16b protein_coding protein_coding MGP_NODShiLtJ_T0058639.1 MGP_NODShiLtJ_G0026619.1 mouse_genomes_project 2 178458907 178564505 + MGP_NODShiLtJ_P0058639 Ppp1r16b protein_coding protein_coding MGP_NODShiLtJ_T0058640.1 MGP_NODShiLtJ_G0026619.1 mouse_genomes_project 2 178489669 178564505 + MGP_NODShiLtJ_P0058640 Ppp1r16b protein_coding protein_coding MGP_NODShiLtJ_T0017593.1 MGP_NODShiLtJ_G0015267.1 mouse_genomes_project 2 17600623 17619986 - Gm20539 processed_transcript processed_transcript MGP_NODShiLtJ_T0055437.1 MGP_NODShiLtJ_G0025773.1 mouse_genomes_project 2 94831301 94832237 + MGP_NODShiLtJ_P0055437 Olfr1018 protein_coding protein_coding MGP_NODShiLtJ_T0056666.1 MGP_NODShiLtJ_G0026176.1 mouse_genomes_project 2 135702936 135771291 - MGP_NODShiLtJ_P0056666 Ehd4 protein_coding protein_coding MGP_NODShiLtJ_T0056667.1 MGP_NODShiLtJ_G0026176.1 mouse_genomes_project 2 135718825 135746285 - Ehd4 protein_coding processed_transcript MGP_NODShiLtJ_T0056668.1 MGP_NODShiLtJ_G0026176.1 mouse_genomes_project 2 135719010 135754134 - Ehd4 protein_coding processed_transcript MGP_NODShiLtJ_T0056669.1 MGP_NODShiLtJ_G0026176.1 mouse_genomes_project 2 135738966 135771144 - Ehd4 protein_coding processed_transcript MGP_NODShiLtJ_T0099118.1 MGP_NODShiLtJ_G0037512.1 mouse_genomes_project 2 93510985 93511086 + Gm27942 snRNA snRNA MGP_NODShiLtJ_T0013679.1 MGP_NODShiLtJ_G0011787.1 mouse_genomes_project 2 162667587 162667990 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056330.1 MGP_NODShiLtJ_G0026081.1 mouse_genomes_project 2 126079680 126080577 + MGP_NODShiLtJ_P0056330 Olfr1289 protein_coding protein_coding MGP_NODShiLtJ_T0100411.1 MGP_NODShiLtJ_G0038805.1 mouse_genomes_project 2 170160372 170160508 + snoRNA snoRNA MGP_NODShiLtJ_T0013433.1 MGP_NODShiLtJ_G0011541.1 mouse_genomes_project 2 62145531 62146221 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013522.1 MGP_NODShiLtJ_G0011630.1 mouse_genomes_project 2 94740795 94741727 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007166.1 MGP_NODShiLtJ_G0005871.1 mouse_genomes_project 2 79791345 79821868 + 8430437L04Rik lincRNA lincRNA MGP_NODShiLtJ_T0013423.1 MGP_NODShiLtJ_G0011531.1 mouse_genomes_project 2 56535091 56535547 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098015.1 MGP_NODShiLtJ_G0036427.1 mouse_genomes_project 2 163735893 163735987 + Gm22731 rRNA rRNA MGP_NODShiLtJ_T0013366.1 MGP_NODShiLtJ_G0011474.1 mouse_genomes_project 2 33628980 33629247 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098006.1 MGP_NODShiLtJ_G0036418.1 mouse_genomes_project 2 93506385 93506498 - n-R5s200 rRNA rRNA MGP_NODShiLtJ_T0053844.1 MGP_NODShiLtJ_G0025449.1 mouse_genomes_project 2 32839512 32841013 - MGP_NODShiLtJ_P0053844 9430097D07Rik protein_coding protein_coding MGP_NODShiLtJ_T0059083.1 MGP_NODShiLtJ_G0026726.1 mouse_genomes_project 2 187706093 187709816 + protein_coding antisense MGP_NODShiLtJ_T0059084.1 MGP_NODShiLtJ_G0026726.1 mouse_genomes_project 2 187706093 187709815 + MGP_NODShiLtJ_P0059084 protein_coding protein_coding MGP_NODShiLtJ_T0059085.1 MGP_NODShiLtJ_G0026726.1 mouse_genomes_project 2 187706094 187709528 + protein_coding retained_intron MGP_NODShiLtJ_T0059086.1 MGP_NODShiLtJ_G0026726.1 mouse_genomes_project 2 187706380 187709336 + protein_coding retained_intron MGP_NODShiLtJ_T0059087.1 MGP_NODShiLtJ_G0026726.1 mouse_genomes_project 2 187706382 187709676 + protein_coding retained_intron MGP_NODShiLtJ_T0059088.1 MGP_NODShiLtJ_G0026726.1 mouse_genomes_project 2 187706808 187709816 + protein_coding retained_intron MGP_NODShiLtJ_T0010320.1 MGP_NODShiLtJ_G0008453.1 mouse_genomes_project 2 83033970 83034044 + Gm24574 miRNA miRNA MGP_NODShiLtJ_T0013680.1 MGP_NODShiLtJ_G0011788.1 mouse_genomes_project 2 163112147 163114401 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054857.1 MGP_NODShiLtJ_G0025641.1 mouse_genomes_project 2 76645578 76647959 + Klhl23 protein_coding processed_transcript MGP_NODShiLtJ_T0054858.1 MGP_NODShiLtJ_G0025641.1 mouse_genomes_project 2 76646004 76661946 + MGP_NODShiLtJ_P0054858 Klhl23 protein_coding protein_coding MGP_NODShiLtJ_T0054859.1 MGP_NODShiLtJ_G0025641.1 mouse_genomes_project 2 76647989 76649880 + Klhl23 protein_coding processed_transcript MGP_NODShiLtJ_T0057545.1 MGP_NODShiLtJ_G0026361.1 mouse_genomes_project 2 149446533 149520234 + MGP_NODShiLtJ_P0057545 1110034G24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057546.1 MGP_NODShiLtJ_G0026361.1 mouse_genomes_project 2 149449759 149519682 + MGP_NODShiLtJ_P0057546 1110034G24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057547.1 MGP_NODShiLtJ_G0026361.1 mouse_genomes_project 2 149449885 149520234 + MGP_NODShiLtJ_P0057547 1110034G24Rik protein_coding protein_coding MGP_NODShiLtJ_T0057548.1 MGP_NODShiLtJ_G0026361.1 mouse_genomes_project 2 149459738 149519761 + 1110034G24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0055019.1 MGP_NODShiLtJ_G0025671.1 mouse_genomes_project 2 80435498 80441045 + MGP_NODShiLtJ_P0055019 Sp9 protein_coding protein_coding MGP_NODShiLtJ_T0101798.1 MGP_NODShiLtJ_G0039966.1 mouse_genomes_project 2 93976913 93979438 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001010.1 MGP_NODShiLtJ_G0000936.1 mouse_genomes_project 2 10375176 10376580 - TEC TEC MGP_NODShiLtJ_T0053728.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32373627 32459415 + MGP_NODShiLtJ_P0053728 Prrc2b protein_coding protein_coding MGP_NODShiLtJ_T0053729.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32373693 32459400 + MGP_NODShiLtJ_P0053729 Prrc2b protein_coding protein_coding MGP_NODShiLtJ_T0053730.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32406788 32456038 + MGP_NODShiLtJ_P0053730 Prrc2b protein_coding protein_coding MGP_NODShiLtJ_T0053731.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32431446 32444721 + Prrc2b protein_coding processed_transcript MGP_NODShiLtJ_T0053732.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32437260 32444380 + MGP_NODShiLtJ_P0053732 Prrc2b protein_coding protein_coding MGP_NODShiLtJ_T0053733.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32441140 32444675 + MGP_NODShiLtJ_P0053733 Prrc2b protein_coding protein_coding MGP_NODShiLtJ_T0053734.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32442274 32444219 + Prrc2b protein_coding processed_transcript MGP_NODShiLtJ_T0053735.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32442342 32446430 + Prrc2b protein_coding processed_transcript MGP_NODShiLtJ_T0053736.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32444592 32447382 + Prrc2b protein_coding processed_transcript MGP_NODShiLtJ_T0053737.1 MGP_NODShiLtJ_G0025435.1 mouse_genomes_project 2 32444830 32446498 + Prrc2b protein_coding processed_transcript MGP_NODShiLtJ_T0013536.1 MGP_NODShiLtJ_G0011644.1 mouse_genomes_project 2 97397232 97397525 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007220.1 MGP_NODShiLtJ_G0005912.1 mouse_genomes_project 2 116352145 116356294 - Gm13869 lincRNA lincRNA MGP_NODShiLtJ_T0097797.1 MGP_NODShiLtJ_G0036209.1 mouse_genomes_project 2 101754453 101754726 + pseudogene pseudogene MGP_NODShiLtJ_T0004054.1 MGP_NODShiLtJ_G0003582.1 mouse_genomes_project 2 161078708 161079316 + Kif16bos antisense antisense MGP_NODShiLtJ_T0101844.1 MGP_NODShiLtJ_G0040012.1 mouse_genomes_project 2 156670469 156670698 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0055497.1 MGP_NODShiLtJ_G0025832.1 mouse_genomes_project 2 96986152 96987148 + MGP_NODShiLtJ_P0055497 Olfr1116 protein_coding protein_coding MGP_NODShiLtJ_T0007352.1 MGP_NODShiLtJ_G0006021.1 mouse_genomes_project 2 189872005 189872813 - Gm14260 lincRNA lincRNA MGP_NODShiLtJ_T0055554.1 MGP_NODShiLtJ_G0025878.1 mouse_genomes_project 2 98538344 98539316 + MGP_NODShiLtJ_P0055554 Olfr1178 protein_coding protein_coding MGP_NODShiLtJ_T0007283.1 MGP_NODShiLtJ_G0005964.1 mouse_genomes_project 2 155194903 155201689 - Gm14062 lincRNA lincRNA MGP_NODShiLtJ_T0058680.1 MGP_NODShiLtJ_G0026628.1 mouse_genomes_project 2 180854933 180881237 + MGP_NODShiLtJ_P0058680 Lpin3 protein_coding protein_coding MGP_NODShiLtJ_T0058681.1 MGP_NODShiLtJ_G0026628.1 mouse_genomes_project 2 180862339 180881242 + MGP_NODShiLtJ_P0058681 Lpin3 protein_coding protein_coding MGP_NODShiLtJ_T0058682.1 MGP_NODShiLtJ_G0026628.1 mouse_genomes_project 2 180862339 180881242 + MGP_NODShiLtJ_P0058682 Lpin3 protein_coding protein_coding MGP_NODShiLtJ_T0058683.1 MGP_NODShiLtJ_G0026628.1 mouse_genomes_project 2 180862402 180881032 + MGP_NODShiLtJ_P0058683 Lpin3 protein_coding protein_coding MGP_NODShiLtJ_T0058684.1 MGP_NODShiLtJ_G0026628.1 mouse_genomes_project 2 180876788 180878977 + Lpin3 protein_coding processed_transcript MGP_NODShiLtJ_T0052992.1 MGP_NODShiLtJ_G0025318.1 mouse_genomes_project 2 25973541 26033587 - MGP_NODShiLtJ_P0052992 Ccdc187 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052994.1 MGP_NODShiLtJ_G0025318.1 mouse_genomes_project 2 26005130 26029217 - MGP_NODShiLtJ_P0052994 Ccdc187 protein_coding protein_coding MGP_NODShiLtJ_T0052995.1 MGP_NODShiLtJ_G0025318.1 mouse_genomes_project 2 26015547 26022359 - MGP_NODShiLtJ_P0052995 Ccdc187 protein_coding protein_coding MGP_NODShiLtJ_T0056347.1 MGP_NODShiLtJ_G0026098.1 mouse_genomes_project 2 126845464 126849200 - MGP_NODShiLtJ_P0056347 protein_coding protein_coding MGP_NODShiLtJ_T0057820.1 MGP_NODShiLtJ_G0026427.1 mouse_genomes_project 2 167306710 167319997 + MGP_NODShiLtJ_P0057820 Gzf1 protein_coding protein_coding MGP_NODShiLtJ_T0057821.1 MGP_NODShiLtJ_G0026427.1 mouse_genomes_project 2 167306898 167309740 + MGP_NODShiLtJ_P0057821 Gzf1 protein_coding protein_coding MGP_NODShiLtJ_T0057822.1 MGP_NODShiLtJ_G0026427.1 mouse_genomes_project 2 167310302 167317261 + Gzf1 protein_coding processed_transcript MGP_NODShiLtJ_T0055526.1 MGP_NODShiLtJ_G0025852.1 mouse_genomes_project 2 97623314 97624247 - MGP_NODShiLtJ_P0055526 Olfr1137 protein_coding protein_coding MGP_NODShiLtJ_T0001059.1 MGP_NODShiLtJ_G0000985.1 mouse_genomes_project 2 75665985 75669996 + TEC TEC MGP_NODShiLtJ_T0058813.1 MGP_NODShiLtJ_G0026667.1 mouse_genomes_project 2 184683458 184699363 - MGP_NODShiLtJ_P0058813 Matn4 protein_coding protein_coding MGP_NODShiLtJ_T0058814.1 MGP_NODShiLtJ_G0026667.1 mouse_genomes_project 2 184683458 184699365 - MGP_NODShiLtJ_P0058814 Matn4 protein_coding protein_coding MGP_NODShiLtJ_T0058815.1 MGP_NODShiLtJ_G0026667.1 mouse_genomes_project 2 184683458 184699911 - MGP_NODShiLtJ_P0058815 Matn4 protein_coding protein_coding MGP_NODShiLtJ_T0058816.1 MGP_NODShiLtJ_G0026667.1 mouse_genomes_project 2 184683458 184699363 - MGP_NODShiLtJ_P0058816 Matn4 protein_coding protein_coding MGP_NODShiLtJ_T0058817.1 MGP_NODShiLtJ_G0026667.1 mouse_genomes_project 2 184688124 184699364 - Matn4 protein_coding retained_intron MGP_NODShiLtJ_T0057575.1 MGP_NODShiLtJ_G0026371.1 mouse_genomes_project 2 151830400 152591945 + MGP_NODShiLtJ_P0057575 Plcb1 protein_coding protein_coding MGP_NODShiLtJ_T0057576.1 MGP_NODShiLtJ_G0026371.1 mouse_genomes_project 2 151830492 152591956 + MGP_NODShiLtJ_P0057576 Plcb1 protein_coding protein_coding MGP_NODShiLtJ_T0057577.1 MGP_NODShiLtJ_G0026371.1 mouse_genomes_project 2 151830508 152051013 + Plcb1 protein_coding retained_intron MGP_NODShiLtJ_T0057578.1 MGP_NODShiLtJ_G0026371.1 mouse_genomes_project 2 151830562 152343068 + Plcb1 protein_coding retained_intron MGP_NODShiLtJ_T0057579.1 MGP_NODShiLtJ_G0026371.1 mouse_genomes_project 2 151830863 152502025 + MGP_NODShiLtJ_P0057579 Plcb1 protein_coding protein_coding MGP_NODShiLtJ_T0057580.1 MGP_NODShiLtJ_G0026371.1 mouse_genomes_project 2 152309543 152350672 + Plcb1 protein_coding processed_transcript MGP_NODShiLtJ_T0057581.1 MGP_NODShiLtJ_G0026371.1 mouse_genomes_project 2 152309590 152350677 + MGP_NODShiLtJ_P0057581 Plcb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057582.1 MGP_NODShiLtJ_G0026371.1 mouse_genomes_project 2 152337711 152343957 + Plcb1 protein_coding processed_transcript MGP_NODShiLtJ_T0013574.1 MGP_NODShiLtJ_G0011682.1 mouse_genomes_project 2 115408064 115408358 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017750.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178123915 178127059 - Snhg17 processed_transcript lincRNA MGP_NODShiLtJ_T0017751.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178125522 178131726 - Snhg17 processed_transcript lincRNA MGP_NODShiLtJ_T0017752.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178125980 178131735 - Snhg17 processed_transcript lincRNA MGP_NODShiLtJ_T0017753.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178125980 178131796 - Snhg17 processed_transcript lincRNA MGP_NODShiLtJ_T0017754.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178125980 178131738 - Snhg17 processed_transcript retained_intron MGP_NODShiLtJ_T0017755.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178126000 178131729 - Snhg17 processed_transcript retained_intron MGP_NODShiLtJ_T0017756.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178126237 178128679 - Snhg17 processed_transcript lincRNA MGP_NODShiLtJ_T0017757.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178129453 178131691 - Snhg17 processed_transcript lincRNA MGP_NODShiLtJ_T0017758.1 MGP_NODShiLtJ_G0015353.1 mouse_genomes_project 2 178131082 178131758 - Snhg17 processed_transcript lincRNA MGP_NODShiLtJ_T0013388.1 MGP_NODShiLtJ_G0011496.1 mouse_genomes_project 2 40199922 40200687 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056172.1 MGP_NODShiLtJ_G0026039.1 mouse_genomes_project 2 117363629 117670849 - MGP_NODShiLtJ_P0056172 D430041D05Rik protein_coding protein_coding MGP_NODShiLtJ_T0056173.1 MGP_NODShiLtJ_G0026039.1 mouse_genomes_project 2 117367604 117462303 - D430041D05Rik protein_coding retained_intron MGP_NODShiLtJ_T0056174.1 MGP_NODShiLtJ_G0026039.1 mouse_genomes_project 2 117369327 117492580 - MGP_NODShiLtJ_P0056174 D430041D05Rik protein_coding protein_coding MGP_NODShiLtJ_T0056175.1 MGP_NODShiLtJ_G0026039.1 mouse_genomes_project 2 117372724 117385097 - D430041D05Rik protein_coding retained_intron MGP_NODShiLtJ_T0056176.1 MGP_NODShiLtJ_G0026039.1 mouse_genomes_project 2 117412596 117472995 - D430041D05Rik protein_coding retained_intron MGP_NODShiLtJ_T0056177.1 MGP_NODShiLtJ_G0026039.1 mouse_genomes_project 2 117436413 117491746 - D430041D05Rik protein_coding retained_intron MGP_NODShiLtJ_T0056178.1 MGP_NODShiLtJ_G0026039.1 mouse_genomes_project 2 117488886 117670507 - MGP_NODShiLtJ_P0056178 D430041D05Rik protein_coding protein_coding MGP_NODShiLtJ_T0056179.1 MGP_NODShiLtJ_G0026039.1 mouse_genomes_project 2 117489179 117670508 - MGP_NODShiLtJ_P0056179 D430041D05Rik protein_coding protein_coding MGP_NODShiLtJ_T0100342.1 MGP_NODShiLtJ_G0038736.1 mouse_genomes_project 2 18623314 18623446 + Gm24670 snoRNA snoRNA MGP_NODShiLtJ_T0059488.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202638938 202699537 - MGP_NODShiLtJ_P0059488 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059489.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202638939 202699659 - MGP_NODShiLtJ_P0059489 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059490.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202638939 202699745 - MGP_NODShiLtJ_P0059490 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059491.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202638946 202699572 - MGP_NODShiLtJ_P0059491 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059492.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202638948 202699622 - MGP_NODShiLtJ_P0059492 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059493.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202638948 202699622 - MGP_NODShiLtJ_P0059493 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059494.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202638948 202699622 - MGP_NODShiLtJ_P0059494 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059495.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202638948 202699622 - MGP_NODShiLtJ_P0059495 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059496.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202643861 202678037 - MGP_NODShiLtJ_P0059496 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059497.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202644261 202699576 - MGP_NODShiLtJ_P0059497 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059498.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202645765 202673110 - MGP_NODShiLtJ_P0059498 Kcnq2 protein_coding protein_coding MGP_NODShiLtJ_T0059499.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202645815 202658784 - Kcnq2 protein_coding processed_transcript MGP_NODShiLtJ_T0059500.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202647944 202664161 - Kcnq2 protein_coding retained_intron MGP_NODShiLtJ_T0059501.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202649340 202699622 - Kcnq2 protein_coding retained_intron MGP_NODShiLtJ_T0059502.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202659603 202699622 - Kcnq2 protein_coding retained_intron MGP_NODShiLtJ_T0059503.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202659828 202699622 - Kcnq2 protein_coding retained_intron MGP_NODShiLtJ_T0059504.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202671797 202699622 - Kcnq2 protein_coding processed_transcript MGP_NODShiLtJ_T0059505.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202671797 202699688 - Kcnq2 protein_coding retained_intron MGP_NODShiLtJ_T0059506.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202671797 202699622 - Kcnq2 protein_coding retained_intron MGP_NODShiLtJ_T0059507.1 MGP_NODShiLtJ_G0026826.1 mouse_genomes_project 2 202671797 202699622 - Kcnq2 protein_coding retained_intron MGP_NODShiLtJ_T0098004.1 MGP_NODShiLtJ_G0036416.1 mouse_genomes_project 2 82266650 82266750 - n-R5s198 rRNA rRNA MGP_NODShiLtJ_T0054693.1 MGP_NODShiLtJ_G0025610.1 mouse_genomes_project 2 68354591 68995430 - MGP_NODShiLtJ_P0054693 Kcnh7 protein_coding protein_coding MGP_NODShiLtJ_T0054694.1 MGP_NODShiLtJ_G0025610.1 mouse_genomes_project 2 68364127 68627557 - MGP_NODShiLtJ_P0054694 Kcnh7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054695.1 MGP_NODShiLtJ_G0025610.1 mouse_genomes_project 2 68364127 68600300 - MGP_NODShiLtJ_P0054695 Kcnh7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054696.1 MGP_NODShiLtJ_G0025610.1 mouse_genomes_project 2 68473528 68995439 - MGP_NODShiLtJ_P0054696 Kcnh7 protein_coding protein_coding MGP_NODShiLtJ_T0054697.1 MGP_NODShiLtJ_G0025610.1 mouse_genomes_project 2 68473603 68995322 - MGP_NODShiLtJ_P0054697 Kcnh7 protein_coding protein_coding MGP_NODShiLtJ_T0054698.1 MGP_NODShiLtJ_G0025610.1 mouse_genomes_project 2 68991625 68995414 - Kcnh7 protein_coding processed_transcript MGP_NODShiLtJ_T0055621.1 MGP_NODShiLtJ_G0025937.1 mouse_genomes_project 2 100473478 100479431 - MGP_NODShiLtJ_P0055621 Olfr1256 protein_coding protein_coding MGP_NODShiLtJ_T0055622.1 MGP_NODShiLtJ_G0025937.1 mouse_genomes_project 2 100473478 100474399 - MGP_NODShiLtJ_P0055622 Olfr1256 protein_coding protein_coding MGP_NODShiLtJ_T0010329.1 MGP_NODShiLtJ_G0008462.1 mouse_genomes_project 2 103377761 103377824 - Mir7000 miRNA miRNA MGP_NODShiLtJ_T0057143.1 MGP_NODShiLtJ_G0026267.1 mouse_genomes_project 2 143521231 143525911 - MGP_NODShiLtJ_P0057143 Itpripl1 protein_coding protein_coding MGP_NODShiLtJ_T0057144.1 MGP_NODShiLtJ_G0026267.1 mouse_genomes_project 2 143522877 143525775 - MGP_NODShiLtJ_P0057144 Itpripl1 protein_coding protein_coding MGP_NODShiLtJ_T0057145.1 MGP_NODShiLtJ_G0026267.1 mouse_genomes_project 2 143522997 143525059 - MGP_NODShiLtJ_P0057145 Itpripl1 protein_coding protein_coding MGP_NODShiLtJ_T0003869.1 MGP_NODShiLtJ_G0003453.1 mouse_genomes_project 2 25776049 25777315 + Gm13554 antisense antisense MGP_NODShiLtJ_T0003874.1 MGP_NODShiLtJ_G0003456.1 mouse_genomes_project 2 26389871 26395505 + Snhg7os antisense antisense MGP_NODShiLtJ_T0003875.1 MGP_NODShiLtJ_G0003456.1 mouse_genomes_project 2 26392714 26395505 + Snhg7os antisense antisense MGP_NODShiLtJ_T0003876.1 MGP_NODShiLtJ_G0003456.1 mouse_genomes_project 2 26392906 26395505 + Snhg7os antisense antisense MGP_NODShiLtJ_T0013398.1 MGP_NODShiLtJ_G0011506.1 mouse_genomes_project 2 43947269 43947502 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007359.1 MGP_NODShiLtJ_G0006027.1 mouse_genomes_project 2 190410660 190434895 + Gm14249 lincRNA lincRNA MGP_NODShiLtJ_T0013353.1 MGP_NODShiLtJ_G0011461.1 mouse_genomes_project 2 25710074 25710711 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059651.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203351661 203357631 + MGP_NODShiLtJ_P0059651 Oprl1 protein_coding protein_coding MGP_NODShiLtJ_T0059652.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203351687 203357621 + MGP_NODShiLtJ_P0059652 Oprl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059653.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203351691 203355236 + MGP_NODShiLtJ_P0059653 Oprl1 protein_coding protein_coding MGP_NODShiLtJ_T0059654.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203351712 203357620 + MGP_NODShiLtJ_P0059654 Oprl1 protein_coding protein_coding MGP_NODShiLtJ_T0059655.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203351728 203357618 + MGP_NODShiLtJ_P0059655 Oprl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059656.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203351739 203357620 + Oprl1 protein_coding processed_transcript MGP_NODShiLtJ_T0059657.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203351746 203353024 + Oprl1 protein_coding processed_transcript MGP_NODShiLtJ_T0059658.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203351993 203357618 + MGP_NODShiLtJ_P0059658 Oprl1 protein_coding protein_coding MGP_NODShiLtJ_T0059659.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203352238 203355997 + MGP_NODShiLtJ_P0059659 Oprl1 protein_coding protein_coding MGP_NODShiLtJ_T0059660.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203352347 203356018 + MGP_NODShiLtJ_P0059660 Oprl1 protein_coding protein_coding MGP_NODShiLtJ_T0059661.1 MGP_NODShiLtJ_G0026852.1 mouse_genomes_project 2 203352348 203356018 + MGP_NODShiLtJ_P0059661 Oprl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055012.1 MGP_NODShiLtJ_G0025669.1 mouse_genomes_project 2 80088698 80106519 - MGP_NODShiLtJ_P0055012 Gm11084 protein_coding protein_coding MGP_NODShiLtJ_T0010330.1 MGP_NODShiLtJ_G0008463.1 mouse_genomes_project 2 103596188 103596260 + Mir7221 miRNA miRNA MGP_NODShiLtJ_T0053476.1 MGP_NODShiLtJ_G0025398.1 mouse_genomes_project 2 30281453 30324830 + MGP_NODShiLtJ_P0053476 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055451.1 MGP_NODShiLtJ_G0025786.1 mouse_genomes_project 2 95240603 95241563 - MGP_NODShiLtJ_P0055451 protein_coding protein_coding MGP_NODShiLtJ_T0057989.1 MGP_NODShiLtJ_G0026481.1 mouse_genomes_project 2 171626848 171629721 + MGP_NODShiLtJ_P0057989 Defb20 protein_coding protein_coding MGP_NODShiLtJ_T0010319.1 MGP_NODShiLtJ_G0008452.1 mouse_genomes_project 2 82010625 82010693 + Mir10b miRNA miRNA MGP_NODShiLtJ_T0003854.1 MGP_NODShiLtJ_G0003442.1 mouse_genomes_project 2 18559180 18562132 - Gm13348 antisense antisense MGP_NODShiLtJ_T0054080.1 MGP_NODShiLtJ_G0025485.1 mouse_genomes_project 2 35429015 35512609 - MGP_NODShiLtJ_P0054080 protein_coding protein_coding MGP_NODShiLtJ_T0054081.1 MGP_NODShiLtJ_G0025485.1 mouse_genomes_project 2 35429387 35466458 - MGP_NODShiLtJ_P0054081 protein_coding protein_coding MGP_NODShiLtJ_T0054082.1 MGP_NODShiLtJ_G0025485.1 mouse_genomes_project 2 35437437 35439465 - protein_coding processed_transcript MGP_NODShiLtJ_T0054083.1 MGP_NODShiLtJ_G0025485.1 mouse_genomes_project 2 35437531 35446914 - protein_coding retained_intron MGP_NODShiLtJ_T0054084.1 MGP_NODShiLtJ_G0025485.1 mouse_genomes_project 2 35441096 35452390 - protein_coding processed_transcript MGP_NODShiLtJ_T0053491.1 MGP_NODShiLtJ_G0025401.1 mouse_genomes_project 2 30326912 30329016 - MGP_NODShiLtJ_P0053491 Dolk protein_coding protein_coding MGP_NODShiLtJ_T0056224.1 MGP_NODShiLtJ_G0026052.1 mouse_genomes_project 2 118748454 118761483 - MGP_NODShiLtJ_P0056224 Rcn1 protein_coding protein_coding MGP_NODShiLtJ_T0056225.1 MGP_NODShiLtJ_G0026052.1 mouse_genomes_project 2 118749092 118757512 - Rcn1 protein_coding retained_intron MGP_NODShiLtJ_T0007200.1 MGP_NODShiLtJ_G0005898.1 mouse_genomes_project 2 103005596 103060326 - lincRNA lincRNA MGP_NODShiLtJ_T0013491.1 MGP_NODShiLtJ_G0011599.1 mouse_genomes_project 2 84737068 84737501 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058776.1 MGP_NODShiLtJ_G0026650.1 mouse_genomes_project 2 184056681 184064841 + Wisp2 protein_coding processed_transcript MGP_NODShiLtJ_T0058777.1 MGP_NODShiLtJ_G0026650.1 mouse_genomes_project 2 184056709 184068969 + MGP_NODShiLtJ_P0058777 Wisp2 protein_coding protein_coding MGP_NODShiLtJ_T0056342.1 MGP_NODShiLtJ_G0026093.1 mouse_genomes_project 2 126737466 126738405 - MGP_NODShiLtJ_P0056342 protein_coding protein_coding MGP_NODShiLtJ_T0004048.1 MGP_NODShiLtJ_G0003578.1 mouse_genomes_project 2 152418723 152702200 - 9630028H03Rik antisense antisense MGP_NODShiLtJ_T0004049.1 MGP_NODShiLtJ_G0003578.1 mouse_genomes_project 2 152699145 152701912 - 9630028H03Rik antisense antisense MGP_NODShiLtJ_T0055295.1 MGP_NODShiLtJ_G0025731.1 mouse_genomes_project 2 92567730 92601939 - MGP_NODShiLtJ_P0055295 Zswim2 protein_coding protein_coding MGP_NODShiLtJ_T0055296.1 MGP_NODShiLtJ_G0025731.1 mouse_genomes_project 2 92569420 92601941 - MGP_NODShiLtJ_P0055296 Zswim2 protein_coding protein_coding MGP_NODShiLtJ_T0055297.1 MGP_NODShiLtJ_G0025731.1 mouse_genomes_project 2 92575575 92578349 - Zswim2 protein_coding processed_transcript MGP_NODShiLtJ_T0013732.1 MGP_NODShiLtJ_G0011840.1 mouse_genomes_project 2 180817749 180818607 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054481.1 MGP_NODShiLtJ_G0025573.1 mouse_genomes_project 2 56799334 57101350 + MGP_NODShiLtJ_P0054481 Fmnl2 protein_coding protein_coding MGP_NODShiLtJ_T0054482.1 MGP_NODShiLtJ_G0025573.1 mouse_genomes_project 2 56799342 57099428 + MGP_NODShiLtJ_P0054482 Fmnl2 protein_coding protein_coding MGP_NODShiLtJ_T0054483.1 MGP_NODShiLtJ_G0025573.1 mouse_genomes_project 2 56799342 57101751 + MGP_NODShiLtJ_P0054483 Fmnl2 protein_coding protein_coding MGP_NODShiLtJ_T0054484.1 MGP_NODShiLtJ_G0025573.1 mouse_genomes_project 2 56799617 57101357 + MGP_NODShiLtJ_P0054484 Fmnl2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054485.1 MGP_NODShiLtJ_G0025573.1 mouse_genomes_project 2 57081062 57101350 + MGP_NODShiLtJ_P0054485 Fmnl2 protein_coding protein_coding MGP_NODShiLtJ_T0054486.1 MGP_NODShiLtJ_G0025573.1 mouse_genomes_project 2 57087866 57101350 + MGP_NODShiLtJ_P0054486 Fmnl2 protein_coding protein_coding MGP_NODShiLtJ_T0054487.1 MGP_NODShiLtJ_G0025573.1 mouse_genomes_project 2 57093567 57099753 + MGP_NODShiLtJ_P0054487 Fmnl2 protein_coding protein_coding MGP_NODShiLtJ_T0059580.1 MGP_NODShiLtJ_G0026841.1 mouse_genomes_project 2 203102093 203103868 + MGP_NODShiLtJ_P0059580 Abhd16b protein_coding protein_coding MGP_NODShiLtJ_T0003971.1 MGP_NODShiLtJ_G0003527.1 mouse_genomes_project 2 84161792 84228375 + Gm13938 antisense antisense MGP_NODShiLtJ_T0055558.1 MGP_NODShiLtJ_G0025882.1 mouse_genomes_project 2 98653880 98654876 + MGP_NODShiLtJ_P0055558 Olfr1184 protein_coding protein_coding MGP_NODShiLtJ_T0013319.1 MGP_NODShiLtJ_G0011427.1 mouse_genomes_project 2 13793977 13794407 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013524.1 MGP_NODShiLtJ_G0011632.1 mouse_genomes_project 2 95502652 95505581 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052245.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648086 9677983 + MGP_NODShiLtJ_P0052245 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052246.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648125 9677291 + Il15ra protein_coding processed_transcript MGP_NODShiLtJ_T0052247.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648145 9677628 + MGP_NODShiLtJ_P0052247 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052248.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648165 9677634 + MGP_NODShiLtJ_P0052248 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052249.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648171 9662289 + Il15ra protein_coding retained_intron MGP_NODShiLtJ_T0052250.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648183 9677634 + Il15ra protein_coding processed_transcript MGP_NODShiLtJ_T0052251.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648239 9677648 + MGP_NODShiLtJ_P0052251 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052252.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648348 9677067 + Il15ra protein_coding processed_transcript MGP_NODShiLtJ_T0052253.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648508 9663828 + MGP_NODShiLtJ_P0052253 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052254.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648555 9664115 + Il15ra protein_coding retained_intron MGP_NODShiLtJ_T0052255.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648573 9677652 + MGP_NODShiLtJ_P0052255 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052256.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648606 9677983 + MGP_NODShiLtJ_P0052256 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052257.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648606 9677067 + MGP_NODShiLtJ_P0052257 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052258.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648607 9677067 + MGP_NODShiLtJ_P0052258 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052259.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9648644 9676915 + MGP_NODShiLtJ_P0052259 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052260.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9662049 9664009 + Il15ra protein_coding retained_intron MGP_NODShiLtJ_T0052261.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9662153 9677083 + MGP_NODShiLtJ_P0052261 Il15ra protein_coding protein_coding MGP_NODShiLtJ_T0052262.1 MGP_NODShiLtJ_G0025185.1 mouse_genomes_project 2 9666886 9677634 + Il15ra protein_coding retained_intron MGP_NODShiLtJ_T0056687.1 MGP_NODShiLtJ_G0026181.1 mouse_genomes_project 2 135999151 136050588 - MGP_NODShiLtJ_P0056687 Tmem87a protein_coding protein_coding MGP_NODShiLtJ_T0056688.1 MGP_NODShiLtJ_G0026181.1 mouse_genomes_project 2 135999151 136050608 - MGP_NODShiLtJ_P0056688 Tmem87a protein_coding protein_coding MGP_NODShiLtJ_T0056689.1 MGP_NODShiLtJ_G0026181.1 mouse_genomes_project 2 135999155 136050614 - Tmem87a protein_coding processed_transcript MGP_NODShiLtJ_T0056690.1 MGP_NODShiLtJ_G0026181.1 mouse_genomes_project 2 135999790 136050596 - Tmem87a protein_coding processed_transcript MGP_NODShiLtJ_T0056691.1 MGP_NODShiLtJ_G0026181.1 mouse_genomes_project 2 136008700 136050597 - MGP_NODShiLtJ_P0056691 Tmem87a protein_coding protein_coding MGP_NODShiLtJ_T0056692.1 MGP_NODShiLtJ_G0026181.1 mouse_genomes_project 2 136025443 136050632 - Tmem87a protein_coding processed_transcript MGP_NODShiLtJ_T0056693.1 MGP_NODShiLtJ_G0026181.1 mouse_genomes_project 2 136025957 136050600 - Tmem87a protein_coding retained_intron MGP_NODShiLtJ_T0004045.1 MGP_NODShiLtJ_G0003575.1 mouse_genomes_project 2 149455380 149460143 - Gm14097 antisense antisense MGP_NODShiLtJ_T0055457.1 MGP_NODShiLtJ_G0025792.1 mouse_genomes_project 2 95313152 95314100 - MGP_NODShiLtJ_P0055457 Olfr1045 protein_coding protein_coding MGP_NODShiLtJ_T0058709.1 MGP_NODShiLtJ_G0026634.1 mouse_genomes_project 2 183116982 183147390 + L3mbtl1 protein_coding retained_intron MGP_NODShiLtJ_T0058710.1 MGP_NODShiLtJ_G0026634.1 mouse_genomes_project 2 183116984 183149779 + MGP_NODShiLtJ_P0058710 L3mbtl1 protein_coding protein_coding MGP_NODShiLtJ_T0058711.1 MGP_NODShiLtJ_G0026634.1 mouse_genomes_project 2 183116985 183121979 + L3mbtl1 protein_coding processed_transcript MGP_NODShiLtJ_T0058712.1 MGP_NODShiLtJ_G0026634.1 mouse_genomes_project 2 183116985 183121979 + MGP_NODShiLtJ_P0058712 L3mbtl1 protein_coding protein_coding MGP_NODShiLtJ_T0058713.1 MGP_NODShiLtJ_G0026634.1 mouse_genomes_project 2 183117010 183120337 + L3mbtl1 protein_coding processed_transcript MGP_NODShiLtJ_T0058714.1 MGP_NODShiLtJ_G0026634.1 mouse_genomes_project 2 183120280 183146905 + MGP_NODShiLtJ_P0058714 L3mbtl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058715.1 MGP_NODShiLtJ_G0026634.1 mouse_genomes_project 2 183121096 183122631 + L3mbtl1 protein_coding processed_transcript MGP_NODShiLtJ_T0058716.1 MGP_NODShiLtJ_G0026634.1 mouse_genomes_project 2 183121096 183122631 + MGP_NODShiLtJ_P0058716 L3mbtl1 protein_coding protein_coding MGP_NODShiLtJ_T0097799.1 MGP_NODShiLtJ_G0036211.1 mouse_genomes_project 2 105069963 105070712 - pseudogene pseudogene MGP_NODShiLtJ_T0059416.1 MGP_NODShiLtJ_G0026811.1 mouse_genomes_project 2 202020042 202071898 + MGP_NODShiLtJ_P0059416 Ntsr1 protein_coding protein_coding MGP_NODShiLtJ_T0059417.1 MGP_NODShiLtJ_G0026811.1 mouse_genomes_project 2 202020293 202071137 + MGP_NODShiLtJ_P0059417 Ntsr1 protein_coding protein_coding MGP_NODShiLtJ_T0056149.1 MGP_NODShiLtJ_G0026032.1 mouse_genomes_project 2 117162837 117185410 + MGP_NODShiLtJ_P0056149 Lmo2 protein_coding protein_coding MGP_NODShiLtJ_T0056150.1 MGP_NODShiLtJ_G0026032.1 mouse_genomes_project 2 117162846 117186238 + MGP_NODShiLtJ_P0056150 Lmo2 protein_coding protein_coding MGP_NODShiLtJ_T0056152.1 MGP_NODShiLtJ_G0026032.1 mouse_genomes_project 2 117173890 117185452 + MGP_NODShiLtJ_P0056152 Lmo2 protein_coding protein_coding MGP_NODShiLtJ_T0056153.1 MGP_NODShiLtJ_G0026032.1 mouse_genomes_project 2 117174491 117186215 + MGP_NODShiLtJ_P0056153 Lmo2 protein_coding protein_coding MGP_NODShiLtJ_T0056154.1 MGP_NODShiLtJ_G0026032.1 mouse_genomes_project 2 117174503 117180504 + MGP_NODShiLtJ_P0056154 Lmo2 protein_coding protein_coding MGP_NODShiLtJ_T0056155.1 MGP_NODShiLtJ_G0026032.1 mouse_genomes_project 2 117174585 117186234 + MGP_NODShiLtJ_P0056155 Lmo2 protein_coding protein_coding MGP_NODShiLtJ_T0056156.1 MGP_NODShiLtJ_G0026032.1 mouse_genomes_project 2 117174606 117186199 + MGP_NODShiLtJ_P0056156 Lmo2 protein_coding protein_coding MGP_NODShiLtJ_T0056157.1 MGP_NODShiLtJ_G0026032.1 mouse_genomes_project 2 117175541 117185276 + Lmo2 protein_coding processed_transcript MGP_NODShiLtJ_T0017640.1 MGP_NODShiLtJ_G0015296.1 mouse_genomes_project 2 78771635 78774318 + Gm13663 processed_transcript processed_transcript MGP_NODShiLtJ_T0017641.1 MGP_NODShiLtJ_G0015296.1 mouse_genomes_project 2 78772592 78774278 + Gm13663 processed_transcript processed_transcript MGP_NODShiLtJ_T0054319.1 MGP_NODShiLtJ_G0025549.1 mouse_genomes_project 2 40108332 40145682 - MGP_NODShiLtJ_P0054319 Ppp6c protein_coding protein_coding MGP_NODShiLtJ_T0054320.1 MGP_NODShiLtJ_G0025549.1 mouse_genomes_project 2 40111594 40145513 - MGP_NODShiLtJ_P0054320 Ppp6c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054321.1 MGP_NODShiLtJ_G0025549.1 mouse_genomes_project 2 40111637 40145551 - MGP_NODShiLtJ_P0054321 Ppp6c protein_coding protein_coding MGP_NODShiLtJ_T0054322.1 MGP_NODShiLtJ_G0025549.1 mouse_genomes_project 2 40112201 40144636 - MGP_NODShiLtJ_P0054322 Ppp6c protein_coding protein_coding MGP_NODShiLtJ_T0054323.1 MGP_NODShiLtJ_G0025549.1 mouse_genomes_project 2 40112357 40115746 - Ppp6c protein_coding processed_transcript MGP_NODShiLtJ_T0004067.1 MGP_NODShiLtJ_G0003592.1 mouse_genomes_project 2 165895494 165896376 - AI646519 antisense antisense MGP_NODShiLtJ_T0056572.1 MGP_NODShiLtJ_G0026155.1 mouse_genomes_project 2 134808368 134810440 - MGP_NODShiLtJ_P0056572 Rhov protein_coding protein_coding MGP_NODShiLtJ_T0058094.1 MGP_NODShiLtJ_G0026514.1 mouse_genomes_project 2 172744497 172745443 + MGP_NODShiLtJ_P0058094 4930404H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0007374.1 MGP_NODShiLtJ_G0006040.1 mouse_genomes_project 2 196271089 196281328 + Gm14616 lincRNA lincRNA MGP_NODShiLtJ_T0052312.1 MGP_NODShiLtJ_G0025190.1 mouse_genomes_project 2 11023472 11103571 + MGP_NODShiLtJ_P0052312 Pter protein_coding protein_coding MGP_NODShiLtJ_T0052313.1 MGP_NODShiLtJ_G0025190.1 mouse_genomes_project 2 11023493 11081295 + Pter protein_coding processed_transcript MGP_NODShiLtJ_T0052314.1 MGP_NODShiLtJ_G0025190.1 mouse_genomes_project 2 11023500 11103572 + MGP_NODShiLtJ_P0052314 Pter protein_coding protein_coding MGP_NODShiLtJ_T0052315.1 MGP_NODShiLtJ_G0025190.1 mouse_genomes_project 2 11023523 11105859 + MGP_NODShiLtJ_P0052315 Pter protein_coding protein_coding MGP_NODShiLtJ_T0052316.1 MGP_NODShiLtJ_G0025190.1 mouse_genomes_project 2 11023531 11104205 + MGP_NODShiLtJ_P0052316 Pter protein_coding protein_coding MGP_NODShiLtJ_T0052317.1 MGP_NODShiLtJ_G0025190.1 mouse_genomes_project 2 11023532 11082662 + Pter protein_coding processed_transcript MGP_NODShiLtJ_T0052318.1 MGP_NODShiLtJ_G0025190.1 mouse_genomes_project 2 11078704 11104271 + Pter protein_coding retained_intron MGP_NODShiLtJ_T0059262.1 MGP_NODShiLtJ_G0026771.1 mouse_genomes_project 2 194344923 194373645 - MGP_NODShiLtJ_P0059262 Ctcfl protein_coding protein_coding MGP_NODShiLtJ_T0013692.1 MGP_NODShiLtJ_G0011800.1 mouse_genomes_project 2 167041075 167041310 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010243.1 MGP_NODShiLtJ_G0008376.1 mouse_genomes_project 2 8307936 8308030 + Mir466f-2 miRNA miRNA MGP_NODShiLtJ_T0056479.1 MGP_NODShiLtJ_G0026133.1 mouse_genomes_project 2 134085304 134134415 + MGP_NODShiLtJ_P0056479 Bub1b protein_coding protein_coding MGP_NODShiLtJ_T0056480.1 MGP_NODShiLtJ_G0026133.1 mouse_genomes_project 2 134087914 134099433 + Bub1b protein_coding retained_intron MGP_NODShiLtJ_T0056481.1 MGP_NODShiLtJ_G0026133.1 mouse_genomes_project 2 134119943 134121177 + Bub1b protein_coding retained_intron MGP_NODShiLtJ_T0056482.1 MGP_NODShiLtJ_G0026133.1 mouse_genomes_project 2 134120884 134129572 + Bub1b protein_coding retained_intron MGP_NODShiLtJ_T0001039.1 MGP_NODShiLtJ_G0000965.1 mouse_genomes_project 2 33943970 33944249 + TEC TEC MGP_NODShiLtJ_T0013531.1 MGP_NODShiLtJ_G0011639.1 mouse_genomes_project 2 97048274 97048681 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055684.1 MGP_NODShiLtJ_G0025959.1 mouse_genomes_project 2 101727959 101732087 - Ndufs3 protein_coding processed_transcript MGP_NODShiLtJ_T0055685.1 MGP_NODShiLtJ_G0025959.1 mouse_genomes_project 2 101727959 101739446 - MGP_NODShiLtJ_P0055685 Ndufs3 protein_coding protein_coding MGP_NODShiLtJ_T0055686.1 MGP_NODShiLtJ_G0025959.1 mouse_genomes_project 2 101731444 101739261 - Ndufs3 protein_coding processed_transcript MGP_NODShiLtJ_T0055687.1 MGP_NODShiLtJ_G0025959.1 mouse_genomes_project 2 101738441 101739321 - Ndufs3 protein_coding processed_transcript MGP_NODShiLtJ_T0001002.1 MGP_NODShiLtJ_G0000928.1 mouse_genomes_project 2 9075841 9076770 + TEC TEC MGP_NODShiLtJ_T0057770.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164347283 164376686 + MGP_NODShiLtJ_P0057770 protein_coding protein_coding MGP_NODShiLtJ_T0057771.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164347283 164453770 + MGP_NODShiLtJ_P0057771 protein_coding protein_coding MGP_NODShiLtJ_T0057772.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164347304 164378680 + MGP_NODShiLtJ_P0057772 protein_coding protein_coding MGP_NODShiLtJ_T0057773.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164347304 164375914 + MGP_NODShiLtJ_P0057773 protein_coding protein_coding MGP_NODShiLtJ_T0057774.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164347307 164375769 + MGP_NODShiLtJ_P0057774 protein_coding protein_coding MGP_NODShiLtJ_T0057775.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164347313 164627544 + MGP_NODShiLtJ_P0057775 protein_coding protein_coding MGP_NODShiLtJ_T0057776.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164347315 164366120 + MGP_NODShiLtJ_P0057776 protein_coding protein_coding MGP_NODShiLtJ_T0057777.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164452195 164506945 + protein_coding processed_transcript MGP_NODShiLtJ_T0057778.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164456013 164541880 + protein_coding retained_intron MGP_NODShiLtJ_T0057779.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164456145 164542011 + MGP_NODShiLtJ_P0057779 protein_coding protein_coding MGP_NODShiLtJ_T0057780.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164457948 164627540 + protein_coding processed_transcript MGP_NODShiLtJ_T0057781.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164560622 164627463 + protein_coding processed_transcript MGP_NODShiLtJ_T0057782.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164626803 164627540 + protein_coding processed_transcript MGP_NODShiLtJ_T0057783.1 MGP_NODShiLtJ_G0026414.1 mouse_genomes_project 2 164627115 164627298 + MGP_NODShiLtJ_P0057783 protein_coding protein_coding MGP_NODShiLtJ_T0057836.1 MGP_NODShiLtJ_G0026434.1 mouse_genomes_project 2 167452144 167462527 + MGP_NODShiLtJ_P0057836 Cst13 protein_coding protein_coding MGP_NODShiLtJ_T0053028.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26116369 26125684 - MGP_NODShiLtJ_P0053028 Sdccag3 protein_coding protein_coding MGP_NODShiLtJ_T0053029.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26116369 26125696 - MGP_NODShiLtJ_P0053029 Sdccag3 protein_coding protein_coding MGP_NODShiLtJ_T0053030.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26116369 26125677 - MGP_NODShiLtJ_P0053030 Sdccag3 protein_coding protein_coding MGP_NODShiLtJ_T0053031.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26116369 26125671 - MGP_NODShiLtJ_P0053031 Sdccag3 protein_coding protein_coding MGP_NODShiLtJ_T0053032.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26116370 26123014 - Sdccag3 protein_coding processed_transcript MGP_NODShiLtJ_T0053033.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26118987 26120646 - Sdccag3 protein_coding processed_transcript MGP_NODShiLtJ_T0053034.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26118996 26121042 - Sdccag3 protein_coding processed_transcript MGP_NODShiLtJ_T0053035.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26119030 26125341 - MGP_NODShiLtJ_P0053035 Sdccag3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053036.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26122087 26125663 - Sdccag3 protein_coding processed_transcript MGP_NODShiLtJ_T0053037.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26122087 26125686 - Sdccag3 protein_coding processed_transcript MGP_NODShiLtJ_T0053038.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26122445 26125675 - Sdccag3 protein_coding processed_transcript MGP_NODShiLtJ_T0053039.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26122537 26125074 - MGP_NODShiLtJ_P0053039 Sdccag3 protein_coding protein_coding MGP_NODShiLtJ_T0053040.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26122558 26125647 - Sdccag3 protein_coding processed_transcript MGP_NODShiLtJ_T0053041.1 MGP_NODShiLtJ_G0025324.1 mouse_genomes_project 2 26122988 26125545 - Sdccag3 protein_coding processed_transcript MGP_NODShiLtJ_T0052074.1 MGP_NODShiLtJ_G0025155.1 mouse_genomes_project 2 2002088 2029235 + MGP_NODShiLtJ_P0052074 Phyh protein_coding protein_coding MGP_NODShiLtJ_T0052075.1 MGP_NODShiLtJ_G0025155.1 mouse_genomes_project 2 2002149 2015939 + Phyh protein_coding processed_transcript MGP_NODShiLtJ_T0052076.1 MGP_NODShiLtJ_G0025155.1 mouse_genomes_project 2 2027987 2028848 + Phyh protein_coding processed_transcript MGP_NODShiLtJ_T0017684.1 MGP_NODShiLtJ_G0015323.1 mouse_genomes_project 2 128936870 128998307 + A530058N18Rik processed_transcript antisense MGP_NODShiLtJ_T0017685.1 MGP_NODShiLtJ_G0015323.1 mouse_genomes_project 2 128936874 128989281 + A530058N18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0056967.1 MGP_NODShiLtJ_G0026228.1 mouse_genomes_project 2 138127790 138131766 + MGP_NODShiLtJ_P0056967 Duoxa2 protein_coding protein_coding MGP_NODShiLtJ_T0055592.1 MGP_NODShiLtJ_G0025914.1 mouse_genomes_project 2 99595825 99597812 - MGP_NODShiLtJ_P0055592 Olfr1225 protein_coding protein_coding MGP_NODShiLtJ_T0055215.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87035872 87043903 - MGP_NODShiLtJ_P0055215 Cerkl protein_coding protein_coding MGP_NODShiLtJ_T0055216.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87037085 87142293 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055217.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87037835 87038998 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055218.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87037863 87142230 - MGP_NODShiLtJ_P0055218 Cerkl protein_coding protein_coding MGP_NODShiLtJ_T0055219.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87037925 87142246 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055220.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87037925 87142230 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055221.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87037927 87142336 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055222.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87043868 87176281 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055223.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87049302 87078747 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055224.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87060844 87078772 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055225.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87095848 87099478 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0055226.1 MGP_NODShiLtJ_G0025714.1 mouse_genomes_project 2 87097183 87102634 - Cerkl protein_coding processed_transcript MGP_NODShiLtJ_T0058796.1 MGP_NODShiLtJ_G0026657.1 mouse_genomes_project 2 184438926 184446432 - MGP_NODShiLtJ_P0058796 Kcns1 protein_coding protein_coding MGP_NODShiLtJ_T0055445.1 MGP_NODShiLtJ_G0025780.1 mouse_genomes_project 2 95056034 95056991 + MGP_NODShiLtJ_P0055445 Olfr1030 protein_coding protein_coding MGP_NODShiLtJ_T0056343.1 MGP_NODShiLtJ_G0026094.1 mouse_genomes_project 2 126756157 126757096 - MGP_NODShiLtJ_P0056343 protein_coding protein_coding MGP_NODShiLtJ_T0099106.1 MGP_NODShiLtJ_G0037500.1 mouse_genomes_project 2 46813404 46813513 + Gm22867 snRNA snRNA MGP_NODShiLtJ_T0058113.1 MGP_NODShiLtJ_G0026519.1 mouse_genomes_project 2 173157940 173186901 - MGP_NODShiLtJ_P0058113 Sun5 protein_coding protein_coding MGP_NODShiLtJ_T0058114.1 MGP_NODShiLtJ_G0026519.1 mouse_genomes_project 2 173166504 173186901 - Sun5 protein_coding processed_transcript MGP_NODShiLtJ_T0058115.1 MGP_NODShiLtJ_G0026519.1 mouse_genomes_project 2 173181197 173186901 - Sun5 protein_coding processed_transcript MGP_NODShiLtJ_T0003976.1 MGP_NODShiLtJ_G0003531.1 mouse_genomes_project 2 93981572 94013444 + Gm13713 antisense antisense MGP_NODShiLtJ_T0003977.1 MGP_NODShiLtJ_G0003531.1 mouse_genomes_project 2 93981572 93994944 + Gm13713 antisense antisense MGP_NODShiLtJ_T0013430.1 MGP_NODShiLtJ_G0011538.1 mouse_genomes_project 2 60377654 60387251 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057497.1 MGP_NODShiLtJ_G0026352.1 mouse_genomes_project 2 148632552 148667294 + MGP_NODShiLtJ_P0057497 Prn protein_coding protein_coding MGP_NODShiLtJ_T0057498.1 MGP_NODShiLtJ_G0026352.1 mouse_genomes_project 2 148632552 148667294 + MGP_NODShiLtJ_P0057498 Prn protein_coding protein_coding MGP_NODShiLtJ_T0007084.1 MGP_NODShiLtJ_G0005805.1 mouse_genomes_project 2 9249963 9254587 + Gm13293 lincRNA lincRNA MGP_NODShiLtJ_T0056066.1 MGP_NODShiLtJ_G0026019.1 mouse_genomes_project 2 115396288 115502081 - MGP_NODShiLtJ_P0056066 Trim44 protein_coding protein_coding MGP_NODShiLtJ_T0056067.1 MGP_NODShiLtJ_G0026019.1 mouse_genomes_project 2 115400663 115501438 - MGP_NODShiLtJ_P0056067 Trim44 protein_coding protein_coding MGP_NODShiLtJ_T0056068.1 MGP_NODShiLtJ_G0026019.1 mouse_genomes_project 2 115455844 115508980 - MGP_NODShiLtJ_P0056068 Trim44 protein_coding protein_coding MGP_NODShiLtJ_T0013607.1 MGP_NODShiLtJ_G0011715.1 mouse_genomes_project 2 126415426 126419169 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098153.1 MGP_NODShiLtJ_G0036565.1 mouse_genomes_project 2 120623275 120623545 - Gm24885 ribozyme ribozyme MGP_NODShiLtJ_T0057367.1 MGP_NODShiLtJ_G0026328.1 mouse_genomes_project 2 147183240 147202784 - MGP_NODShiLtJ_P0057367 Fastkd5 protein_coding protein_coding MGP_NODShiLtJ_T0057368.1 MGP_NODShiLtJ_G0026328.1 mouse_genomes_project 2 147183242 147202770 - MGP_NODShiLtJ_P0057368 Fastkd5 protein_coding protein_coding MGP_NODShiLtJ_T0013630.1 MGP_NODShiLtJ_G0011738.1 mouse_genomes_project 2 138349498 138350091 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053612.1 MGP_NODShiLtJ_G0025417.1 mouse_genomes_project 2 31070267 31086566 - MGP_NODShiLtJ_P0053612 BC005624 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053613.1 MGP_NODShiLtJ_G0025417.1 mouse_genomes_project 2 31075631 31086647 - MGP_NODShiLtJ_P0053613 BC005624 protein_coding protein_coding MGP_NODShiLtJ_T0053614.1 MGP_NODShiLtJ_G0025417.1 mouse_genomes_project 2 31079360 31085212 - BC005624 protein_coding retained_intron MGP_NODShiLtJ_T0053615.1 MGP_NODShiLtJ_G0025417.1 mouse_genomes_project 2 31085608 31086907 - BC005624 protein_coding retained_intron MGP_NODShiLtJ_T0055132.1 MGP_NODShiLtJ_G0025703.1 mouse_genomes_project 2 84066179 84084989 - MGP_NODShiLtJ_P0055132 Prkra protein_coding protein_coding MGP_NODShiLtJ_T0055133.1 MGP_NODShiLtJ_G0025703.1 mouse_genomes_project 2 84073773 84077710 - Prkra protein_coding processed_transcript MGP_NODShiLtJ_T0058062.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172373830 172422597 + Tm9sf4 protein_coding processed_transcript MGP_NODShiLtJ_T0058063.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172373830 172428183 + MGP_NODShiLtJ_P0058063 Tm9sf4 protein_coding protein_coding MGP_NODShiLtJ_T0058064.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172374068 172404894 + Tm9sf4 protein_coding processed_transcript MGP_NODShiLtJ_T0058065.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172374075 172409397 + Tm9sf4 protein_coding retained_intron MGP_NODShiLtJ_T0058066.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172406257 172408046 + Tm9sf4 protein_coding retained_intron MGP_NODShiLtJ_T0058067.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172406784 172417803 + Tm9sf4 protein_coding processed_transcript MGP_NODShiLtJ_T0058068.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172410205 172421637 + Tm9sf4 protein_coding processed_transcript MGP_NODShiLtJ_T0058069.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172411392 172415967 + Tm9sf4 protein_coding processed_transcript MGP_NODShiLtJ_T0058070.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172417299 172428183 + Tm9sf4 protein_coding retained_intron MGP_NODShiLtJ_T0058071.1 MGP_NODShiLtJ_G0026507.1 mouse_genomes_project 2 172419889 172428183 + Tm9sf4 protein_coding retained_intron MGP_NODShiLtJ_T0003885.1 MGP_NODShiLtJ_G0003464.1 mouse_genomes_project 2 30277680 30279110 - 1700084E18Rik antisense antisense MGP_NODShiLtJ_T0003886.1 MGP_NODShiLtJ_G0003464.1 mouse_genomes_project 2 30278378 30279110 - 1700084E18Rik antisense pseudogene MGP_NODShiLtJ_T0052735.1 MGP_NODShiLtJ_G0025266.1 mouse_genomes_project 2 24875839 24878157 - MGP_NODShiLtJ_P0052735 Rnf224 protein_coding protein_coding MGP_NODShiLtJ_T0052736.1 MGP_NODShiLtJ_G0025266.1 mouse_genomes_project 2 24876346 24878053 - MGP_NODShiLtJ_P0052736 Rnf224 protein_coding protein_coding MGP_NODShiLtJ_T0010335.1 MGP_NODShiLtJ_G0008468.1 mouse_genomes_project 2 105391416 105391481 + Mir129b miRNA miRNA MGP_NODShiLtJ_T0013555.1 MGP_NODShiLtJ_G0011663.1 mouse_genomes_project 2 105539251 105539848 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004016.1 MGP_NODShiLtJ_G0003556.1 mouse_genomes_project 2 137001225 137003537 - Gm14978 antisense antisense MGP_NODShiLtJ_T0052468.1 MGP_NODShiLtJ_G0025220.1 mouse_genomes_project 2 18357380 18359210 + MGP_NODShiLtJ_P0052468 Ptf1a protein_coding protein_coding MGP_NODShiLtJ_T0100360.1 MGP_NODShiLtJ_G0038754.1 mouse_genomes_project 2 41338828 41338954 + Gm24467 snoRNA snoRNA MGP_NODShiLtJ_T0054920.1 MGP_NODShiLtJ_G0025653.1 mouse_genomes_project 2 77981985 78008017 + MGP_NODShiLtJ_P0054920 Dcaf17 protein_coding protein_coding MGP_NODShiLtJ_T0054921.1 MGP_NODShiLtJ_G0025653.1 mouse_genomes_project 2 77982401 78018648 + MGP_NODShiLtJ_P0054921 Dcaf17 protein_coding protein_coding MGP_NODShiLtJ_T0054922.1 MGP_NODShiLtJ_G0025653.1 mouse_genomes_project 2 77982415 77998638 + MGP_NODShiLtJ_P0054922 Dcaf17 protein_coding protein_coding MGP_NODShiLtJ_T0054923.1 MGP_NODShiLtJ_G0025653.1 mouse_genomes_project 2 77982438 78021930 + MGP_NODShiLtJ_P0054923 Dcaf17 protein_coding protein_coding MGP_NODShiLtJ_T0054924.1 MGP_NODShiLtJ_G0025653.1 mouse_genomes_project 2 77982441 78003929 + MGP_NODShiLtJ_P0054924 Dcaf17 protein_coding protein_coding MGP_NODShiLtJ_T0054925.1 MGP_NODShiLtJ_G0025653.1 mouse_genomes_project 2 77982503 78013074 + MGP_NODShiLtJ_P0054925 Dcaf17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054926.1 MGP_NODShiLtJ_G0025653.1 mouse_genomes_project 2 77982509 78010043 + MGP_NODShiLtJ_P0054926 Dcaf17 protein_coding protein_coding MGP_NODShiLtJ_T0054927.1 MGP_NODShiLtJ_G0025653.1 mouse_genomes_project 2 77995794 78002522 + Dcaf17 protein_coding processed_transcript MGP_NODShiLtJ_T0057870.1 MGP_NODShiLtJ_G0026449.1 mouse_genomes_project 2 169635542 169644198 - MGP_NODShiLtJ_P0057870 Vsx1 protein_coding protein_coding MGP_NODShiLtJ_T0052188.1 MGP_NODShiLtJ_G0025175.1 mouse_genomes_project 2 7887314 7915773 - MGP_NODShiLtJ_P0052188 Atp5c1 protein_coding protein_coding MGP_NODShiLtJ_T0052189.1 MGP_NODShiLtJ_G0025175.1 mouse_genomes_project 2 7887314 7915707 - MGP_NODShiLtJ_P0052189 Atp5c1 protein_coding protein_coding MGP_NODShiLtJ_T0052190.1 MGP_NODShiLtJ_G0025175.1 mouse_genomes_project 2 7890871 7915666 - MGP_NODShiLtJ_P0052190 Atp5c1 protein_coding protein_coding MGP_NODShiLtJ_T0052191.1 MGP_NODShiLtJ_G0025175.1 mouse_genomes_project 2 7898600 7915122 - MGP_NODShiLtJ_P0052191 Atp5c1 protein_coding protein_coding MGP_NODShiLtJ_T0052192.1 MGP_NODShiLtJ_G0025175.1 mouse_genomes_project 2 7898744 7915439 - MGP_NODShiLtJ_P0052192 Atp5c1 protein_coding protein_coding MGP_NODShiLtJ_T0052193.1 MGP_NODShiLtJ_G0025175.1 mouse_genomes_project 2 7899426 7915318 - MGP_NODShiLtJ_P0052193 Atp5c1 protein_coding protein_coding MGP_NODShiLtJ_T0099113.1 MGP_NODShiLtJ_G0037507.1 mouse_genomes_project 2 81905500 81905607 + Gm22975 snRNA snRNA MGP_NODShiLtJ_T0055298.1 MGP_NODShiLtJ_G0025732.1 mouse_genomes_project 2 92660780 92665363 + MGP_NODShiLtJ_P0055298 Gm13693 protein_coding protein_coding MGP_NODShiLtJ_T0053312.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29159358 29215146 - MGP_NODShiLtJ_P0053312 Ntng2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053313.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29159611 29215120 - MGP_NODShiLtJ_P0053313 Ntng2 protein_coding protein_coding MGP_NODShiLtJ_T0053314.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29159638 29215061 - MGP_NODShiLtJ_P0053314 Ntng2 protein_coding protein_coding MGP_NODShiLtJ_T0053315.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29159638 29215061 - MGP_NODShiLtJ_P0053315 Ntng2 protein_coding protein_coding MGP_NODShiLtJ_T0053316.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29159638 29215061 - MGP_NODShiLtJ_P0053316 Ntng2 protein_coding protein_coding MGP_NODShiLtJ_T0053317.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29163285 29168854 - Ntng2 protein_coding processed_transcript MGP_NODShiLtJ_T0053318.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29163458 29169752 - Ntng2 protein_coding processed_transcript MGP_NODShiLtJ_T0053319.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29165391 29168854 - Ntng2 protein_coding processed_transcript MGP_NODShiLtJ_T0053320.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29165505 29169752 - Ntng2 protein_coding processed_transcript MGP_NODShiLtJ_T0053321.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29168651 29220026 - MGP_NODShiLtJ_P0053321 Ntng2 protein_coding protein_coding MGP_NODShiLtJ_T0053322.1 MGP_NODShiLtJ_G0025376.1 mouse_genomes_project 2 29196588 29215153 - Ntng2 protein_coding processed_transcript MGP_NODShiLtJ_T0057325.1 MGP_NODShiLtJ_G0026315.1 mouse_genomes_project 2 146827981 146833230 - MGP_NODShiLtJ_P0057325 Idh3b protein_coding protein_coding MGP_NODShiLtJ_T0057326.1 MGP_NODShiLtJ_G0026315.1 mouse_genomes_project 2 146827984 146829223 - MGP_NODShiLtJ_P0057326 Idh3b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057327.1 MGP_NODShiLtJ_G0026315.1 mouse_genomes_project 2 146830816 146833117 - Idh3b protein_coding retained_intron MGP_NODShiLtJ_T0057328.1 MGP_NODShiLtJ_G0026315.1 mouse_genomes_project 2 146832345 146833098 - Idh3b protein_coding retained_intron MGP_NODShiLtJ_T0054275.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39568393 39802010 - MGP_NODShiLtJ_P0054275 Nr6a1 protein_coding protein_coding MGP_NODShiLtJ_T0054276.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39568397 39799349 - MGP_NODShiLtJ_P0054276 Nr6a1 protein_coding protein_coding MGP_NODShiLtJ_T0054277.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39568397 39635823 - MGP_NODShiLtJ_P0054277 Nr6a1 protein_coding protein_coding MGP_NODShiLtJ_T0054278.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39586961 39589829 - Nr6a1 protein_coding processed_transcript MGP_NODShiLtJ_T0054279.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39588091 39592322 - Nr6a1 protein_coding processed_transcript MGP_NODShiLtJ_T0054280.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39588499 39635828 - MGP_NODShiLtJ_P0054280 Nr6a1 protein_coding protein_coding MGP_NODShiLtJ_T0054281.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39589788 39636419 - Nr6a1 protein_coding processed_transcript MGP_NODShiLtJ_T0054282.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39589907 39799407 - MGP_NODShiLtJ_P0054282 Nr6a1 protein_coding protein_coding MGP_NODShiLtJ_T0054283.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39591805 39635777 - Nr6a1 protein_coding processed_transcript MGP_NODShiLtJ_T0054284.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39592321 39614839 - Nr6a1 protein_coding retained_intron MGP_NODShiLtJ_T0054285.1 MGP_NODShiLtJ_G0025542.1 mouse_genomes_project 2 39633228 39635777 - Nr6a1 protein_coding processed_transcript MGP_NODShiLtJ_T0054545.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64369004 64574665 + MGP_NODShiLtJ_P0054545 Pkp4 protein_coding protein_coding MGP_NODShiLtJ_T0054546.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64369004 64574666 + MGP_NODShiLtJ_P0054546 Pkp4 protein_coding protein_coding MGP_NODShiLtJ_T0054547.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64370628 64574285 + MGP_NODShiLtJ_P0054547 Pkp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054548.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64370628 64557044 + MGP_NODShiLtJ_P0054548 Pkp4 protein_coding protein_coding MGP_NODShiLtJ_T0054549.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64370648 64574669 + MGP_NODShiLtJ_P0054549 Pkp4 protein_coding protein_coding MGP_NODShiLtJ_T0054550.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64370660 64522535 + Pkp4 protein_coding processed_transcript MGP_NODShiLtJ_T0054551.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64370683 64557047 + MGP_NODShiLtJ_P0054551 Pkp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054552.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64371567 64426405 + Pkp4 protein_coding processed_transcript MGP_NODShiLtJ_T0054553.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64371567 64522767 + MGP_NODShiLtJ_P0054553 Pkp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054554.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64410299 64426420 + Pkp4 protein_coding processed_transcript MGP_NODShiLtJ_T0054555.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64426056 64574668 + MGP_NODShiLtJ_P0054555 Pkp4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054556.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64441122 64574666 + MGP_NODShiLtJ_P0054556 Pkp4 protein_coding protein_coding MGP_NODShiLtJ_T0054557.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64481561 64525638 + Pkp4 protein_coding processed_transcript MGP_NODShiLtJ_T0054558.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64541085 64574666 + Pkp4 protein_coding processed_transcript MGP_NODShiLtJ_T0054559.1 MGP_NODShiLtJ_G0025590.1 mouse_genomes_project 2 64560367 64566427 + Pkp4 protein_coding processed_transcript MGP_NODShiLtJ_T0010362.1 MGP_NODShiLtJ_G0008495.1 mouse_genomes_project 2 166631625 166631704 + Gm27420 miRNA miRNA MGP_NODShiLtJ_T0055969.1 MGP_NODShiLtJ_G0026001.1 mouse_genomes_project 2 104729725 104769561 + MGP_NODShiLtJ_P0055969 Alx4 protein_coding protein_coding MGP_NODShiLtJ_T0055970.1 MGP_NODShiLtJ_G0026001.1 mouse_genomes_project 2 104729729 104769561 + MGP_NODShiLtJ_P0055970 Alx4 protein_coding protein_coding MGP_NODShiLtJ_T0055425.1 MGP_NODShiLtJ_G0025761.1 mouse_genomes_project 2 94297053 94303383 - MGP_NODShiLtJ_P0055425 Olfr993 protein_coding protein_coding MGP_NODShiLtJ_T0058072.1 MGP_NODShiLtJ_G0026508.1 mouse_genomes_project 2 172443377 172446450 - MGP_NODShiLtJ_P0058072 Tspyl3 protein_coding protein_coding MGP_NODShiLtJ_T0055583.1 MGP_NODShiLtJ_G0025906.1 mouse_genomes_project 2 99401519 99402434 - MGP_NODShiLtJ_P0055583 Olfr1217 protein_coding protein_coding MGP_NODShiLtJ_T0007145.1 MGP_NODShiLtJ_G0005852.1 mouse_genomes_project 2 55239518 55259795 - 1700057H21Rik lincRNA lincRNA MGP_NODShiLtJ_T0007146.1 MGP_NODShiLtJ_G0005852.1 mouse_genomes_project 2 55239584 55258948 - 1700057H21Rik lincRNA lincRNA MGP_NODShiLtJ_T0013459.1 MGP_NODShiLtJ_G0011567.1 mouse_genomes_project 2 72443125 72443347 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013718.1 MGP_NODShiLtJ_G0011826.1 mouse_genomes_project 2 175989316 175989580 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013299.1 MGP_NODShiLtJ_G0011407.1 mouse_genomes_project 2 6236245 6236792 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056120.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116912125 116953086 - MGP_NODShiLtJ_P0056120 Nat10 protein_coding protein_coding MGP_NODShiLtJ_T0056121.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116912129 116953057 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056122.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116912129 116953057 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056123.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116912129 116953013 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056124.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116912530 116915299 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056125.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116912796 116953020 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056126.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116922692 116925364 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056127.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116922887 116924130 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056128.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116925209 116934460 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056129.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116929629 116953086 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056130.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116941171 116952742 - MGP_NODShiLtJ_P0056130 Nat10 protein_coding protein_coding MGP_NODShiLtJ_T0056131.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116943935 116953077 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056132.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116947938 116953011 - Nat10 protein_coding retained_intron MGP_NODShiLtJ_T0056133.1 MGP_NODShiLtJ_G0026030.1 mouse_genomes_project 2 116948075 116950344 - MGP_NODShiLtJ_P0056133 Nat10 protein_coding protein_coding MGP_NODShiLtJ_T0013348.1 MGP_NODShiLtJ_G0011456.1 mouse_genomes_project 2 24056684 24059419 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003839.1 MGP_NODShiLtJ_G0003429.1 mouse_genomes_project 2 3670213 3674461 - Gm13388 antisense antisense MGP_NODShiLtJ_T0055424.1 MGP_NODShiLtJ_G0025760.1 mouse_genomes_project 2 94283972 94284902 - MGP_NODShiLtJ_P0055424 Olfr992 protein_coding protein_coding MGP_NODShiLtJ_T0007107.1 MGP_NODShiLtJ_G0005822.1 mouse_genomes_project 2 27935042 27936525 - Gm13371 lincRNA lincRNA MGP_NODShiLtJ_T0054967.1 MGP_NODShiLtJ_G0025662.1 mouse_genomes_project 2 78528442 78531788 - MGP_NODShiLtJ_P0054967 Dlx2 protein_coding protein_coding MGP_NODShiLtJ_T0054968.1 MGP_NODShiLtJ_G0025662.1 mouse_genomes_project 2 78529899 78530984 - Dlx2 protein_coding retained_intron MGP_NODShiLtJ_T0052333.1 MGP_NODShiLtJ_G0025194.1 mouse_genomes_project 2 11658841 11710101 - MGP_NODShiLtJ_P0052333 Trdmt1 protein_coding protein_coding MGP_NODShiLtJ_T0052334.1 MGP_NODShiLtJ_G0025194.1 mouse_genomes_project 2 11669245 11710083 - Trdmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0052335.1 MGP_NODShiLtJ_G0025194.1 mouse_genomes_project 2 11675243 11710096 - MGP_NODShiLtJ_P0052335 Trdmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007230.1 MGP_NODShiLtJ_G0005921.1 mouse_genomes_project 2 121931143 122039925 - Gm13912 lincRNA lincRNA MGP_NODShiLtJ_T0057038.1 MGP_NODShiLtJ_G0026243.1 mouse_genomes_project 2 141375206 141455640 + MGP_NODShiLtJ_P0057038 Slc12a1 protein_coding protein_coding MGP_NODShiLtJ_T0057039.1 MGP_NODShiLtJ_G0026243.1 mouse_genomes_project 2 141375281 141389725 + Slc12a1 protein_coding retained_intron MGP_NODShiLtJ_T0057040.1 MGP_NODShiLtJ_G0026243.1 mouse_genomes_project 2 141375301 141455637 + MGP_NODShiLtJ_P0057040 Slc12a1 protein_coding protein_coding MGP_NODShiLtJ_T0057041.1 MGP_NODShiLtJ_G0026243.1 mouse_genomes_project 2 141375301 141455640 + MGP_NODShiLtJ_P0057041 Slc12a1 protein_coding protein_coding MGP_NODShiLtJ_T0011389.1 MGP_NODShiLtJ_G0009522.1 mouse_genomes_project 2 47832912 47833113 + Vis1 misc_RNA misc_RNA MGP_NODShiLtJ_T0013739.1 MGP_NODShiLtJ_G0011847.1 mouse_genomes_project 2 183158827 183161234 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013330.1 MGP_NODShiLtJ_G0011438.1 mouse_genomes_project 2 17493108 17493370 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055532.1 MGP_NODShiLtJ_G0025857.1 mouse_genomes_project 2 97740072 97741017 + MGP_NODShiLtJ_P0055532 Olfr1143 protein_coding protein_coding MGP_NODShiLtJ_T0057673.1 MGP_NODShiLtJ_G0026391.1 mouse_genomes_project 2 161247410 161257224 + MGP_NODShiLtJ_P0057673 Snrpb2 protein_coding protein_coding MGP_NODShiLtJ_T0057674.1 MGP_NODShiLtJ_G0026391.1 mouse_genomes_project 2 161247432 161250106 + Snrpb2 protein_coding retained_intron MGP_NODShiLtJ_T0057675.1 MGP_NODShiLtJ_G0026391.1 mouse_genomes_project 2 161247502 161253795 + MGP_NODShiLtJ_P0057675 Snrpb2 protein_coding protein_coding MGP_NODShiLtJ_T0057676.1 MGP_NODShiLtJ_G0026391.1 mouse_genomes_project 2 161248773 161253795 + Snrpb2 protein_coding retained_intron MGP_NODShiLtJ_T0057677.1 MGP_NODShiLtJ_G0026391.1 mouse_genomes_project 2 161252544 161257224 + Snrpb2 protein_coding retained_intron MGP_NODShiLtJ_T0003989.1 MGP_NODShiLtJ_G0003539.1 mouse_genomes_project 2 117490433 117510418 + Gm13883 antisense antisense MGP_NODShiLtJ_T0003990.1 MGP_NODShiLtJ_G0003539.1 mouse_genomes_project 2 117490433 117494292 + Gm13883 antisense antisense MGP_NODShiLtJ_T0017772.1 MGP_NODShiLtJ_G0015362.1 mouse_genomes_project 2 193099406 193105267 - 1700028P15Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017773.1 MGP_NODShiLtJ_G0015362.1 mouse_genomes_project 2 193100713 193104600 - 1700028P15Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017774.1 MGP_NODShiLtJ_G0015362.1 mouse_genomes_project 2 193100714 193105292 - 1700028P15Rik processed_transcript retained_intron MGP_NODShiLtJ_T0010333.1 MGP_NODShiLtJ_G0008466.1 mouse_genomes_project 2 105306548 105306652 - Gm23630 miRNA miRNA MGP_NODShiLtJ_T0056850.1 MGP_NODShiLtJ_G0026202.1 mouse_genomes_project 2 136997112 137018331 + MGP_NODShiLtJ_P0056850 Map1a protein_coding protein_coding MGP_NODShiLtJ_T0056851.1 MGP_NODShiLtJ_G0026202.1 mouse_genomes_project 2 136997282 136998586 + Map1a protein_coding processed_transcript MGP_NODShiLtJ_T0056852.1 MGP_NODShiLtJ_G0026202.1 mouse_genomes_project 2 137002982 137016931 + MGP_NODShiLtJ_P0056852 Map1a protein_coding protein_coding MGP_NODShiLtJ_T0056853.1 MGP_NODShiLtJ_G0026202.1 mouse_genomes_project 2 137002991 137015114 + Map1a protein_coding processed_transcript MGP_NODShiLtJ_T0054415.1 MGP_NODShiLtJ_G0025560.1 mouse_genomes_project 2 53403346 53576944 + MGP_NODShiLtJ_P0054415 Lypd6b protein_coding protein_coding MGP_NODShiLtJ_T0054416.1 MGP_NODShiLtJ_G0025560.1 mouse_genomes_project 2 53403389 53558089 + Lypd6b protein_coding processed_transcript MGP_NODShiLtJ_T0054417.1 MGP_NODShiLtJ_G0025560.1 mouse_genomes_project 2 53463149 53569642 + Lypd6b protein_coding processed_transcript MGP_NODShiLtJ_T0054418.1 MGP_NODShiLtJ_G0025560.1 mouse_genomes_project 2 53557994 53576944 + MGP_NODShiLtJ_P0054418 Lypd6b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053177.1 MGP_NODShiLtJ_G0025349.1 mouse_genomes_project 2 26932509 26952412 + MGP_NODShiLtJ_P0053177 Dbh protein_coding protein_coding MGP_NODShiLtJ_T0053178.1 MGP_NODShiLtJ_G0025349.1 mouse_genomes_project 2 26946304 26946584 + Dbh protein_coding processed_transcript MGP_NODShiLtJ_T0017629.1 MGP_NODShiLtJ_G0015288.1 mouse_genomes_project 2 56319158 56328706 + A430018G15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017630.1 MGP_NODShiLtJ_G0015288.1 mouse_genomes_project 2 56319158 56325716 + A430018G15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017696.1 MGP_NODShiLtJ_G0015327.1 mouse_genomes_project 2 133720636 133750772 - Gm29232 processed_transcript processed_transcript MGP_NODShiLtJ_T0013406.1 MGP_NODShiLtJ_G0011514.1 mouse_genomes_project 2 51797815 51798129 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054166.1 MGP_NODShiLtJ_G0025499.1 mouse_genomes_project 2 36632268 36651640 - MGP_NODShiLtJ_P0054166 Rbm18 protein_coding protein_coding MGP_NODShiLtJ_T0054167.1 MGP_NODShiLtJ_G0025499.1 mouse_genomes_project 2 36633789 36653969 - MGP_NODShiLtJ_P0054167 Rbm18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054168.1 MGP_NODShiLtJ_G0025499.1 mouse_genomes_project 2 36633964 36654008 - MGP_NODShiLtJ_P0054168 Rbm18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054169.1 MGP_NODShiLtJ_G0025499.1 mouse_genomes_project 2 36642035 36654004 - Rbm18 protein_coding retained_intron MGP_NODShiLtJ_T0054432.1 MGP_NODShiLtJ_G0025563.1 mouse_genomes_project 2 54917642 54939394 - MGP_NODShiLtJ_P0054432 Rnd3 protein_coding protein_coding MGP_NODShiLtJ_T0054433.1 MGP_NODShiLtJ_G0025563.1 mouse_genomes_project 2 54924351 54939608 - Rnd3 protein_coding retained_intron MGP_NODShiLtJ_T0052528.1 MGP_NODShiLtJ_G0025230.1 mouse_genomes_project 2 21945145 22012666 + Apbb1ip protein_coding processed_transcript MGP_NODShiLtJ_T0052529.1 MGP_NODShiLtJ_G0025230.1 mouse_genomes_project 2 21945145 22059958 + MGP_NODShiLtJ_P0052529 Apbb1ip protein_coding protein_coding MGP_NODShiLtJ_T0052530.1 MGP_NODShiLtJ_G0025230.1 mouse_genomes_project 2 21945441 22033892 + Apbb1ip protein_coding processed_transcript MGP_NODShiLtJ_T0052531.1 MGP_NODShiLtJ_G0025230.1 mouse_genomes_project 2 21945496 22005115 + Apbb1ip protein_coding retained_intron MGP_NODShiLtJ_T0013342.1 MGP_NODShiLtJ_G0011450.1 mouse_genomes_project 2 22099657 22100197 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0054951.1 MGP_NODShiLtJ_G0025658.1 mouse_genomes_project 2 78363626 78368209 - MGP_NODShiLtJ_P0054951 protein_coding protein_coding MGP_NODShiLtJ_T0013322.1 MGP_NODShiLtJ_G0011430.1 mouse_genomes_project 2 15801073 15801879 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057862.1 MGP_NODShiLtJ_G0026447.1 mouse_genomes_project 2 169520074 169547091 - MGP_NODShiLtJ_P0057862 Apmap protein_coding protein_coding MGP_NODShiLtJ_T0057863.1 MGP_NODShiLtJ_G0026447.1 mouse_genomes_project 2 169524107 169538761 - Apmap protein_coding processed_transcript MGP_NODShiLtJ_T0057864.1 MGP_NODShiLtJ_G0026447.1 mouse_genomes_project 2 169532146 169547068 - Apmap protein_coding processed_transcript MGP_NODShiLtJ_T0057678.1 MGP_NODShiLtJ_G0026392.1 mouse_genomes_project 2 161262843 161266080 + MGP_NODShiLtJ_P0057678 Otor protein_coding protein_coding MGP_NODShiLtJ_T0001021.1 MGP_NODShiLtJ_G0000947.1 mouse_genomes_project 2 12224380 12226979 - TEC TEC MGP_NODShiLtJ_T0001009.1 MGP_NODShiLtJ_G0000935.1 mouse_genomes_project 2 9621037 9621458 + TEC TEC MGP_NODShiLtJ_T0053176.1 MGP_NODShiLtJ_G0025348.1 mouse_genomes_project 2 26875897 26910066 - MGP_NODShiLtJ_P0053176 Fam163b protein_coding protein_coding MGP_NODShiLtJ_T0007365.1 MGP_NODShiLtJ_G0006032.1 mouse_genomes_project 2 192266722 192349094 + Gm14266 lincRNA lincRNA MGP_NODShiLtJ_T0007368.1 MGP_NODShiLtJ_G0006032.1 mouse_genomes_project 2 192330068 192351252 + Gm14266 lincRNA lincRNA MGP_NODShiLtJ_T0055582.1 MGP_NODShiLtJ_G0025905.1 mouse_genomes_project 2 99390897 99391833 - MGP_NODShiLtJ_P0055582 Olfr1216 protein_coding protein_coding MGP_NODShiLtJ_T0007118.1 MGP_NODShiLtJ_G0005830.1 mouse_genomes_project 2 34049729 34052264 - 9430024E24Rik lincRNA lincRNA MGP_NODShiLtJ_T0001068.1 MGP_NODShiLtJ_G0000994.1 mouse_genomes_project 2 133487767 133490743 + TEC TEC MGP_NODShiLtJ_T0058831.1 MGP_NODShiLtJ_G0026672.1 mouse_genomes_project 2 184769396 184774102 - MGP_NODShiLtJ_P0058831 Trp53tg5 protein_coding protein_coding MGP_NODShiLtJ_T0059210.1 MGP_NODShiLtJ_G0026754.1 mouse_genomes_project 2 191513148 191537294 + MGP_NODShiLtJ_P0059210 Pfdn4 protein_coding protein_coding MGP_NODShiLtJ_T0059211.1 MGP_NODShiLtJ_G0026754.1 mouse_genomes_project 2 191528415 191537350 + MGP_NODShiLtJ_P0059211 Pfdn4 protein_coding protein_coding MGP_NODShiLtJ_T0059212.1 MGP_NODShiLtJ_G0026754.1 mouse_genomes_project 2 191528625 191537089 + MGP_NODShiLtJ_P0059212 Pfdn4 protein_coding protein_coding MGP_NODShiLtJ_T0059213.1 MGP_NODShiLtJ_G0026754.1 mouse_genomes_project 2 191528700 191537350 + MGP_NODShiLtJ_P0059213 Pfdn4 protein_coding protein_coding MGP_NODShiLtJ_T0059214.1 MGP_NODShiLtJ_G0026754.1 mouse_genomes_project 2 191528740 191536939 + MGP_NODShiLtJ_P0059214 Pfdn4 protein_coding protein_coding MGP_NODShiLtJ_T0059215.1 MGP_NODShiLtJ_G0026754.1 mouse_genomes_project 2 191529882 191536946 + MGP_NODShiLtJ_P0059215 Pfdn4 protein_coding protein_coding MGP_NODShiLtJ_T0059216.1 MGP_NODShiLtJ_G0026754.1 mouse_genomes_project 2 191533123 191534861 + MGP_NODShiLtJ_P0059216 Pfdn4 protein_coding protein_coding MGP_NODShiLtJ_T0053359.1 MGP_NODShiLtJ_G0025383.1 mouse_genomes_project 2 29824520 29849508 + Urm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053360.1 MGP_NODShiLtJ_G0025383.1 mouse_genomes_project 2 29831860 29849737 + Urm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053361.1 MGP_NODShiLtJ_G0025383.1 mouse_genomes_project 2 29831860 29851365 + MGP_NODShiLtJ_P0053361 Urm1 protein_coding protein_coding MGP_NODShiLtJ_T0053362.1 MGP_NODShiLtJ_G0025383.1 mouse_genomes_project 2 29831879 29849784 + Urm1 protein_coding processed_transcript MGP_NODShiLtJ_T0053363.1 MGP_NODShiLtJ_G0025383.1 mouse_genomes_project 2 29831913 29839170 + Urm1 protein_coding retained_intron MGP_NODShiLtJ_T0053364.1 MGP_NODShiLtJ_G0025383.1 mouse_genomes_project 2 29848010 29850427 + Urm1 protein_coding retained_intron MGP_NODShiLtJ_T0058033.1 MGP_NODShiLtJ_G0026501.1 mouse_genomes_project 2 172144407 172154821 - MGP_NODShiLtJ_P0058033 Dusp15 protein_coding protein_coding MGP_NODShiLtJ_T0058034.1 MGP_NODShiLtJ_G0026501.1 mouse_genomes_project 2 172144434 172147968 - Dusp15 protein_coding retained_intron MGP_NODShiLtJ_T0058035.1 MGP_NODShiLtJ_G0026501.1 mouse_genomes_project 2 172148344 172154947 - MGP_NODShiLtJ_P0058035 Dusp15 protein_coding protein_coding MGP_NODShiLtJ_T0058036.1 MGP_NODShiLtJ_G0026501.1 mouse_genomes_project 2 172148388 172155063 - MGP_NODShiLtJ_P0058036 Dusp15 protein_coding protein_coding MGP_NODShiLtJ_T0057133.1 MGP_NODShiLtJ_G0026265.1 mouse_genomes_project 2 143446500 143466116 + Blvra protein_coding retained_intron MGP_NODShiLtJ_T0057134.1 MGP_NODShiLtJ_G0026265.1 mouse_genomes_project 2 143446502 143475315 + MGP_NODShiLtJ_P0057134 Blvra protein_coding protein_coding MGP_NODShiLtJ_T0057135.1 MGP_NODShiLtJ_G0026265.1 mouse_genomes_project 2 143446528 143465665 + MGP_NODShiLtJ_P0057135 Blvra protein_coding protein_coding MGP_NODShiLtJ_T0057136.1 MGP_NODShiLtJ_G0026265.1 mouse_genomes_project 2 143456567 143470369 + MGP_NODShiLtJ_P0057136 Blvra protein_coding protein_coding MGP_NODShiLtJ_T0057112.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143141553 143238407 - MGP_NODShiLtJ_P0057112 Trpm7 protein_coding protein_coding MGP_NODShiLtJ_T0057113.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143141560 143145513 - Trpm7 protein_coding retained_intron MGP_NODShiLtJ_T0057114.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143142803 143152513 - Trpm7 protein_coding retained_intron MGP_NODShiLtJ_T0057115.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143142874 143147823 - MGP_NODShiLtJ_P0057115 Trpm7 protein_coding protein_coding MGP_NODShiLtJ_T0057116.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143146970 143147806 - Trpm7 protein_coding retained_intron MGP_NODShiLtJ_T0057117.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143147259 143154947 - Trpm7 protein_coding processed_transcript MGP_NODShiLtJ_T0057118.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143163600 143168916 - Trpm7 protein_coding retained_intron MGP_NODShiLtJ_T0057119.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143181844 143186431 - Trpm7 protein_coding retained_intron MGP_NODShiLtJ_T0057120.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143183417 143238617 - Trpm7 protein_coding retained_intron MGP_NODShiLtJ_T0057121.1 MGP_NODShiLtJ_G0026262.1 mouse_genomes_project 2 143183420 143186770 - Trpm7 protein_coding retained_intron MGP_NODShiLtJ_T0058778.1 MGP_NODShiLtJ_G0026651.1 mouse_genomes_project 2 184092585 184098174 + MGP_NODShiLtJ_P0058778 Kcnk15 protein_coding protein_coding MGP_NODShiLtJ_T0058779.1 MGP_NODShiLtJ_G0026651.1 mouse_genomes_project 2 184092667 184098978 + MGP_NODShiLtJ_P0058779 Kcnk15 protein_coding protein_coding MGP_NODShiLtJ_T0057436.1 MGP_NODShiLtJ_G0026340.1 mouse_genomes_project 2 147778570 147794273 - MGP_NODShiLtJ_P0057436 1700037H04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057437.1 MGP_NODShiLtJ_G0026340.1 mouse_genomes_project 2 147778571 147781275 - 1700037H04Rik protein_coding retained_intron MGP_NODShiLtJ_T0057438.1 MGP_NODShiLtJ_G0026340.1 mouse_genomes_project 2 147778571 147794259 - MGP_NODShiLtJ_P0057438 1700037H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0057439.1 MGP_NODShiLtJ_G0026340.1 mouse_genomes_project 2 147779040 147794263 - MGP_NODShiLtJ_P0057439 1700037H04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057440.1 MGP_NODShiLtJ_G0026340.1 mouse_genomes_project 2 147779050 147794320 - MGP_NODShiLtJ_P0057440 1700037H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0057441.1 MGP_NODShiLtJ_G0026340.1 mouse_genomes_project 2 147779407 147794281 - MGP_NODShiLtJ_P0057441 1700037H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0057442.1 MGP_NODShiLtJ_G0026340.1 mouse_genomes_project 2 147780527 147794281 - 1700037H04Rik protein_coding processed_transcript MGP_NODShiLtJ_T0054355.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47515333 47657122 - MGP_NODShiLtJ_P0054355 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054356.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47520472 47648671 - MGP_NODShiLtJ_P0054356 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054357.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47520472 47651441 - MGP_NODShiLtJ_P0054357 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054358.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47521789 47651164 - MGP_NODShiLtJ_P0054358 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054359.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47521855 47648444 - MGP_NODShiLtJ_P0054359 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054360.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47521896 47651052 - MGP_NODShiLtJ_P0054360 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054361.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47531349 47648608 - MGP_NODShiLtJ_P0054361 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054362.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47536238 47649329 - MGP_NODShiLtJ_P0054362 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054363.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47536263 47559738 - MGP_NODShiLtJ_P0054363 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054364.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47536329 47648400 - MGP_NODShiLtJ_P0054364 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054365.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47537228 47591193 - Zeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0054366.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47537230 47649311 - MGP_NODShiLtJ_P0054366 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054367.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47544861 47649231 - Zeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0054368.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47553740 47651430 - MGP_NODShiLtJ_P0054368 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054369.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47557720 47651251 - Zeb2 protein_coding retained_intron MGP_NODShiLtJ_T0054370.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47557727 47651407 - Zeb2 protein_coding retained_intron MGP_NODShiLtJ_T0054371.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47559726 47648783 - MGP_NODShiLtJ_P0054371 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054372.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47559811 47651446 - MGP_NODShiLtJ_P0054372 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054373.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47559882 47648910 - MGP_NODShiLtJ_P0054373 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054374.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47632912 47648889 - MGP_NODShiLtJ_P0054374 Zeb2 protein_coding protein_coding MGP_NODShiLtJ_T0054375.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47642239 47651410 - Zeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0054376.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47642239 47648643 - Zeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0054377.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47642239 47651378 - Zeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0054378.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47643466 47648232 - Zeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0054379.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47644327 47648640 - Zeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0054380.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47644686 47651163 - Zeb2 protein_coding retained_intron MGP_NODShiLtJ_T0054381.1 MGP_NODShiLtJ_G0025554.1 mouse_genomes_project 2 47648244 47653244 - Zeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0017592.1 MGP_NODShiLtJ_G0015266.1 mouse_genomes_project 2 16778259 16780680 - 1810059C17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0053935.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33211787 33248909 - MGP_NODShiLtJ_P0053935 Lrsam1 protein_coding protein_coding MGP_NODShiLtJ_T0053936.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33211791 33249268 - MGP_NODShiLtJ_P0053936 Lrsam1 protein_coding protein_coding MGP_NODShiLtJ_T0053937.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33216162 33229520 - MGP_NODShiLtJ_P0053937 Lrsam1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053938.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33222415 33225370 - Lrsam1 protein_coding retained_intron MGP_NODShiLtJ_T0053939.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33241874 33249253 - MGP_NODShiLtJ_P0053939 Lrsam1 protein_coding protein_coding MGP_NODShiLtJ_T0053940.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33241876 33249246 - MGP_NODShiLtJ_P0053940 Lrsam1 protein_coding protein_coding MGP_NODShiLtJ_T0053941.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33241889 33247560 - MGP_NODShiLtJ_P0053941 Lrsam1 protein_coding protein_coding MGP_NODShiLtJ_T0053942.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33241893 33248905 - MGP_NODShiLtJ_P0053942 Lrsam1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053943.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33244902 33249247 - MGP_NODShiLtJ_P0053943 Lrsam1 protein_coding protein_coding MGP_NODShiLtJ_T0053944.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33244909 33249247 - MGP_NODShiLtJ_P0053944 Lrsam1 protein_coding protein_coding MGP_NODShiLtJ_T0053945.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33247900 33249254 - Lrsam1 protein_coding processed_transcript MGP_NODShiLtJ_T0053946.1 MGP_NODShiLtJ_G0025465.1 mouse_genomes_project 2 33248727 33249260 - Lrsam1 protein_coding processed_transcript MGP_NODShiLtJ_T0013474.1 MGP_NODShiLtJ_G0011582.1 mouse_genomes_project 2 77769889 77770787 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053980.1 MGP_NODShiLtJ_G0025470.1 mouse_genomes_project 2 33519542 33551202 + MGP_NODShiLtJ_P0053980 Angptl2 protein_coding protein_coding MGP_NODShiLtJ_T0053981.1 MGP_NODShiLtJ_G0025470.1 mouse_genomes_project 2 33519546 33548004 + Angptl2 protein_coding retained_intron MGP_NODShiLtJ_T0053982.1 MGP_NODShiLtJ_G0025470.1 mouse_genomes_project 2 33519571 33533617 + Angptl2 protein_coding retained_intron MGP_NODShiLtJ_T0053983.1 MGP_NODShiLtJ_G0025470.1 mouse_genomes_project 2 33519590 33545878 + MGP_NODShiLtJ_P0053983 Angptl2 protein_coding protein_coding MGP_NODShiLtJ_T0017646.1 MGP_NODShiLtJ_G0015301.1 mouse_genomes_project 2 83164080 83169185 + Gm13657 processed_transcript processed_transcript MGP_NODShiLtJ_T0053655.1 MGP_NODShiLtJ_G0025421.1 mouse_genomes_project 2 31377355 31429671 + MGP_NODShiLtJ_P0053655 Ncs1 protein_coding protein_coding MGP_NODShiLtJ_T0053656.1 MGP_NODShiLtJ_G0025421.1 mouse_genomes_project 2 31377698 31426014 + MGP_NODShiLtJ_P0053656 Ncs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052925.1 MGP_NODShiLtJ_G0025300.1 mouse_genomes_project 2 25331768 25334866 + MGP_NODShiLtJ_P0052925 Lcn8 protein_coding protein_coding MGP_NODShiLtJ_T0057329.1 MGP_NODShiLtJ_G0026316.1 mouse_genomes_project 2 146843866 146923621 + MGP_NODShiLtJ_P0057329 Ebf4 protein_coding protein_coding MGP_NODShiLtJ_T0057330.1 MGP_NODShiLtJ_G0026316.1 mouse_genomes_project 2 146844636 146923621 + Ebf4 protein_coding retained_intron MGP_NODShiLtJ_T0057331.1 MGP_NODShiLtJ_G0026316.1 mouse_genomes_project 2 146844636 146923621 + MGP_NODShiLtJ_P0057331 Ebf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057332.1 MGP_NODShiLtJ_G0026316.1 mouse_genomes_project 2 146844636 146923621 + MGP_NODShiLtJ_P0057332 Ebf4 protein_coding protein_coding MGP_NODShiLtJ_T0057333.1 MGP_NODShiLtJ_G0026316.1 mouse_genomes_project 2 146844636 146923621 + MGP_NODShiLtJ_P0057333 Ebf4 protein_coding protein_coding MGP_NODShiLtJ_T0057334.1 MGP_NODShiLtJ_G0026316.1 mouse_genomes_project 2 146844636 146923621 + MGP_NODShiLtJ_P0057334 Ebf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099120.1 MGP_NODShiLtJ_G0037514.1 mouse_genomes_project 2 102062723 102062829 + Gm23390 snRNA snRNA MGP_NODShiLtJ_T0007277.1 MGP_NODShiLtJ_G0005958.1 mouse_genomes_project 2 152771226 152774241 + Platr3 lincRNA lincRNA MGP_NODShiLtJ_T0053923.1 MGP_NODShiLtJ_G0025462.1 mouse_genomes_project 2 33058195 33065227 - MGP_NODShiLtJ_P0053923 Cfap157 protein_coding protein_coding MGP_NODShiLtJ_T0053924.1 MGP_NODShiLtJ_G0025462.1 mouse_genomes_project 2 33059029 33059945 - Cfap157 protein_coding retained_intron MGP_NODShiLtJ_T0053241.1 MGP_NODShiLtJ_G0025362.1 mouse_genomes_project 2 28395207 28395584 + MGP_NODShiLtJ_P0053241 protein_coding protein_coding MGP_NODShiLtJ_T0001031.1 MGP_NODShiLtJ_G0000957.1 mouse_genomes_project 2 13338106 13340867 + TEC TEC MGP_NODShiLtJ_T0007233.1 MGP_NODShiLtJ_G0005924.1 mouse_genomes_project 2 129220506 129221768 - Gm29234 lincRNA lincRNA MGP_NODShiLtJ_T0056965.1 MGP_NODShiLtJ_G0026227.1 mouse_genomes_project 2 138105275 138127160 - MGP_NODShiLtJ_P0056965 Duox2 protein_coding protein_coding MGP_NODShiLtJ_T0056966.1 MGP_NODShiLtJ_G0026227.1 mouse_genomes_project 2 138110378 138113260 - Duox2 protein_coding processed_transcript MGP_NODShiLtJ_T0099101.1 MGP_NODShiLtJ_G0037495.1 mouse_genomes_project 2 32858792 32858897 - Gm23369 snRNA snRNA MGP_NODShiLtJ_T0001008.1 MGP_NODShiLtJ_G0000934.1 mouse_genomes_project 2 9460415 9462518 - TEC TEC MGP_NODShiLtJ_T0058046.1 MGP_NODShiLtJ_G0026503.1 mouse_genomes_project 2 172221541 172228201 - MGP_NODShiLtJ_P0058046 Pdrg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058047.1 MGP_NODShiLtJ_G0026503.1 mouse_genomes_project 2 172221541 172228201 - MGP_NODShiLtJ_P0058047 Pdrg1 protein_coding protein_coding MGP_NODShiLtJ_T0058048.1 MGP_NODShiLtJ_G0026503.1 mouse_genomes_project 2 172222121 172225253 - Pdrg1 protein_coding retained_intron MGP_NODShiLtJ_T0058049.1 MGP_NODShiLtJ_G0026503.1 mouse_genomes_project 2 172222946 172228140 - MGP_NODShiLtJ_P0058049 Pdrg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058050.1 MGP_NODShiLtJ_G0026503.1 mouse_genomes_project 2 172224975 172228120 - Pdrg1 protein_coding retained_intron MGP_NODShiLtJ_T0058051.1 MGP_NODShiLtJ_G0026503.1 mouse_genomes_project 2 172225145 172228136 - MGP_NODShiLtJ_P0058051 Pdrg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058052.1 MGP_NODShiLtJ_G0026503.1 mouse_genomes_project 2 172226113 172228151 - Pdrg1 protein_coding retained_intron MGP_NODShiLtJ_T0058053.1 MGP_NODShiLtJ_G0026503.1 mouse_genomes_project 2 172226777 172228116 - Pdrg1 protein_coding processed_transcript MGP_NODShiLtJ_T0058624.1 MGP_NODShiLtJ_G0026615.1 mouse_genomes_project 2 178281322 178286903 + MGP_NODShiLtJ_P0058624 Adig protein_coding protein_coding MGP_NODShiLtJ_T0058625.1 MGP_NODShiLtJ_G0026615.1 mouse_genomes_project 2 178281363 178286903 + MGP_NODShiLtJ_P0058625 Adig protein_coding protein_coding MGP_NODShiLtJ_T0058626.1 MGP_NODShiLtJ_G0026615.1 mouse_genomes_project 2 178281449 178284614 + Adig protein_coding processed_transcript MGP_NODShiLtJ_T0007343.1 MGP_NODShiLtJ_G0006013.1 mouse_genomes_project 2 188521427 188526530 + Gm14321 lincRNA lincRNA MGP_NODShiLtJ_T0007344.1 MGP_NODShiLtJ_G0006013.1 mouse_genomes_project 2 188521496 188526087 + Gm14321 lincRNA lincRNA MGP_NODShiLtJ_T0098009.1 MGP_NODShiLtJ_G0036421.1 mouse_genomes_project 2 119426752 119426868 + n-R5s201 rRNA rRNA MGP_NODShiLtJ_T0010358.1 MGP_NODShiLtJ_G0008491.1 mouse_genomes_project 2 150412899 150412986 + Mir3090 miRNA miRNA MGP_NODShiLtJ_T0055469.1 MGP_NODShiLtJ_G0025804.1 mouse_genomes_project 2 95792956 95793925 - MGP_NODShiLtJ_P0055469 Olfr228 protein_coding protein_coding MGP_NODShiLtJ_T0007197.1 MGP_NODShiLtJ_G0005895.1 mouse_genomes_project 2 94063382 94074291 + Gm13715 lincRNA lincRNA MGP_NODShiLtJ_T0057364.1 MGP_NODShiLtJ_G0026326.1 mouse_genomes_project 2 147144974 147146909 - MGP_NODShiLtJ_P0057364 Avp protein_coding protein_coding MGP_NODShiLtJ_T0052719.1 MGP_NODShiLtJ_G0025262.1 mouse_genomes_project 2 24850143 24851588 - Stpg3 protein_coding processed_transcript MGP_NODShiLtJ_T0052720.1 MGP_NODShiLtJ_G0025262.1 mouse_genomes_project 2 24850144 24852568 - Stpg3 protein_coding processed_transcript MGP_NODShiLtJ_T0052721.1 MGP_NODShiLtJ_G0025262.1 mouse_genomes_project 2 24850495 24852567 - MGP_NODShiLtJ_P0052721 Stpg3 protein_coding protein_coding MGP_NODShiLtJ_T0052722.1 MGP_NODShiLtJ_G0025262.1 mouse_genomes_project 2 24850698 24852574 - MGP_NODShiLtJ_P0052722 Stpg3 protein_coding protein_coding MGP_NODShiLtJ_T0052723.1 MGP_NODShiLtJ_G0025262.1 mouse_genomes_project 2 24850854 24852528 - Stpg3 protein_coding processed_transcript MGP_NODShiLtJ_T0010386.1 MGP_NODShiLtJ_G0008519.1 mouse_genomes_project 2 195626003 195626082 - Mir296 miRNA miRNA MGP_NODShiLtJ_T0059483.1 MGP_NODShiLtJ_G0026825.1 mouse_genomes_project 2 202581665 202602360 - MGP_NODShiLtJ_P0059483 Chrna4 protein_coding protein_coding MGP_NODShiLtJ_T0059484.1 MGP_NODShiLtJ_G0026825.1 mouse_genomes_project 2 202581666 202591616 - MGP_NODShiLtJ_P0059484 Chrna4 protein_coding protein_coding MGP_NODShiLtJ_T0059485.1 MGP_NODShiLtJ_G0026825.1 mouse_genomes_project 2 202585598 202602590 - MGP_NODShiLtJ_P0059485 Chrna4 protein_coding protein_coding MGP_NODShiLtJ_T0059486.1 MGP_NODShiLtJ_G0026825.1 mouse_genomes_project 2 202592712 202602510 - Chrna4 protein_coding processed_transcript MGP_NODShiLtJ_T0059487.1 MGP_NODShiLtJ_G0026825.1 mouse_genomes_project 2 202597311 202606848 - MGP_NODShiLtJ_P0059487 Chrna4 protein_coding protein_coding MGP_NODShiLtJ_T0053014.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26093889 26112910 - MGP_NODShiLtJ_P0053014 Snapc4 protein_coding protein_coding MGP_NODShiLtJ_T0053015.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26093891 26096149 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053016.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26093898 26112914 - MGP_NODShiLtJ_P0053016 Snapc4 protein_coding protein_coding MGP_NODShiLtJ_T0053017.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26093900 26112893 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053018.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26097738 26098895 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053019.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26100581 26104756 - MGP_NODShiLtJ_P0053019 Snapc4 protein_coding protein_coding MGP_NODShiLtJ_T0053020.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26100610 26104736 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053021.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26100631 26102267 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053022.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26101108 26105253 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053023.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26101957 26104480 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053024.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26101957 26112896 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053025.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26104686 26105863 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053026.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26108762 26112914 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0053027.1 MGP_NODShiLtJ_G0025323.1 mouse_genomes_project 2 26109467 26112887 - Snapc4 protein_coding processed_transcript MGP_NODShiLtJ_T0013372.1 MGP_NODShiLtJ_G0011480.1 mouse_genomes_project 2 35969880 35970187 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052876.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25165785 25170914 + MGP_NODShiLtJ_P0052876 Fbxw5 protein_coding protein_coding MGP_NODShiLtJ_T0052877.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25166240 25168975 + Fbxw5 protein_coding processed_transcript MGP_NODShiLtJ_T0052878.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25166242 25169238 + Fbxw5 protein_coding processed_transcript MGP_NODShiLtJ_T0052879.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25166283 25168611 + Fbxw5 protein_coding processed_transcript MGP_NODShiLtJ_T0052880.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25166303 25169029 + Fbxw5 protein_coding processed_transcript MGP_NODShiLtJ_T0052881.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25167982 25169009 + Fbxw5 protein_coding processed_transcript MGP_NODShiLtJ_T0052882.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25168462 25169225 + Fbxw5 protein_coding processed_transcript MGP_NODShiLtJ_T0052883.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25168650 25170259 + MGP_NODShiLtJ_P0052883 Fbxw5 protein_coding protein_coding MGP_NODShiLtJ_T0052884.1 MGP_NODShiLtJ_G0025290.1 mouse_genomes_project 2 25169331 25170370 + Fbxw5 protein_coding processed_transcript MGP_NODShiLtJ_T0017767.1 MGP_NODShiLtJ_G0015359.1 mouse_genomes_project 2 187844245 187848747 + 1110018N20Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017768.1 MGP_NODShiLtJ_G0015359.1 mouse_genomes_project 2 187844700 187849013 + 1110018N20Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017769.1 MGP_NODShiLtJ_G0015359.1 mouse_genomes_project 2 187845254 187849296 + 1110018N20Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0007075.1 MGP_NODShiLtJ_G0005798.1 mouse_genomes_project 2 5088272 5161895 - Gm13211 lincRNA lincRNA MGP_NODShiLtJ_T0004057.1 MGP_NODShiLtJ_G0003584.1 mouse_genomes_project 2 162007748 162054142 - Pcsk2os2 antisense antisense MGP_NODShiLtJ_T0004058.1 MGP_NODShiLtJ_G0003584.1 mouse_genomes_project 2 162009329 162061792 - Pcsk2os2 antisense antisense MGP_NODShiLtJ_T0007280.1 MGP_NODShiLtJ_G0005961.1 mouse_genomes_project 2 154454242 154454992 + Gm28214 lincRNA lincRNA MGP_NODShiLtJ_T0052098.1 MGP_NODShiLtJ_G0025160.1 mouse_genomes_project 2 2445754 2890643 - MGP_NODShiLtJ_P0052098 Camk1d protein_coding protein_coding MGP_NODShiLtJ_T0052099.1 MGP_NODShiLtJ_G0025160.1 mouse_genomes_project 2 2451184 2858815 - MGP_NODShiLtJ_P0052099 Camk1d protein_coding protein_coding MGP_NODShiLtJ_T0052100.1 MGP_NODShiLtJ_G0025160.1 mouse_genomes_project 2 2610803 2859169 - Camk1d protein_coding processed_transcript MGP_NODShiLtJ_T0052101.1 MGP_NODShiLtJ_G0025160.1 mouse_genomes_project 2 2732857 2890631 - Camk1d protein_coding processed_transcript MGP_NODShiLtJ_T0056467.1 MGP_NODShiLtJ_G0026131.1 mouse_genomes_project 2 133959955 133963080 - MGP_NODShiLtJ_P0056467 Srp14 protein_coding protein_coding MGP_NODShiLtJ_T0056468.1 MGP_NODShiLtJ_G0026131.1 mouse_genomes_project 2 133959956 133962207 - Srp14 protein_coding processed_transcript MGP_NODShiLtJ_T0056469.1 MGP_NODShiLtJ_G0026131.1 mouse_genomes_project 2 133959966 133963017 - Srp14 protein_coding processed_transcript MGP_NODShiLtJ_T0056470.1 MGP_NODShiLtJ_G0026131.1 mouse_genomes_project 2 133961888 133963004 - MGP_NODShiLtJ_P0056470 Srp14 protein_coding protein_coding MGP_NODShiLtJ_T0001005.1 MGP_NODShiLtJ_G0000931.1 mouse_genomes_project 2 9243312 9244201 + TEC TEC MGP_NODShiLtJ_T0004029.1 MGP_NODShiLtJ_G0003566.1 mouse_genomes_project 2 145733666 145755234 + Gm14024 antisense antisense MGP_NODShiLtJ_T0057995.1 MGP_NODShiLtJ_G0026487.1 mouse_genomes_project 2 171744303 171746503 + MGP_NODShiLtJ_P0057995 Defb21 protein_coding protein_coding MGP_NODShiLtJ_T0003957.1 MGP_NODShiLtJ_G0003518.1 mouse_genomes_project 2 80537208 80546803 + Gm13709 antisense antisense MGP_NODShiLtJ_T0055379.1 MGP_NODShiLtJ_G0025749.1 mouse_genomes_project 2 93656325 93681002 + MGP_NODShiLtJ_P0055379 Slc43a1 protein_coding protein_coding MGP_NODShiLtJ_T0055380.1 MGP_NODShiLtJ_G0025749.1 mouse_genomes_project 2 93656870 93667608 + MGP_NODShiLtJ_P0055380 Slc43a1 protein_coding protein_coding MGP_NODShiLtJ_T0055381.1 MGP_NODShiLtJ_G0025749.1 mouse_genomes_project 2 93656883 93681010 + MGP_NODShiLtJ_P0055381 Slc43a1 protein_coding protein_coding MGP_NODShiLtJ_T0055382.1 MGP_NODShiLtJ_G0025749.1 mouse_genomes_project 2 93656892 93679812 + Slc43a1 protein_coding retained_intron MGP_NODShiLtJ_T0055383.1 MGP_NODShiLtJ_G0025749.1 mouse_genomes_project 2 93657674 93681005 + MGP_NODShiLtJ_P0055383 Slc43a1 protein_coding protein_coding MGP_NODShiLtJ_T0055384.1 MGP_NODShiLtJ_G0025749.1 mouse_genomes_project 2 93658100 93681018 + MGP_NODShiLtJ_P0055384 Slc43a1 protein_coding protein_coding MGP_NODShiLtJ_T0011390.1 MGP_NODShiLtJ_G0009523.1 mouse_genomes_project 2 53532862 53532972 - Gm25223 misc_RNA misc_RNA MGP_NODShiLtJ_T0057059.1 MGP_NODShiLtJ_G0026251.1 mouse_genomes_project 2 142085660 142117045 - MGP_NODShiLtJ_P0057059 Cops2 protein_coding protein_coding MGP_NODShiLtJ_T0057060.1 MGP_NODShiLtJ_G0026251.1 mouse_genomes_project 2 142086955 142116945 - MGP_NODShiLtJ_P0057060 Cops2 protein_coding protein_coding MGP_NODShiLtJ_T0057061.1 MGP_NODShiLtJ_G0026251.1 mouse_genomes_project 2 142086958 142117045 - MGP_NODShiLtJ_P0057061 Cops2 protein_coding protein_coding MGP_NODShiLtJ_T0057062.1 MGP_NODShiLtJ_G0026251.1 mouse_genomes_project 2 142099965 142116902 - Cops2 protein_coding processed_transcript MGP_NODShiLtJ_T0057063.1 MGP_NODShiLtJ_G0026251.1 mouse_genomes_project 2 142107661 142116969 - Cops2 protein_coding processed_transcript MGP_NODShiLtJ_T0055625.1 MGP_NODShiLtJ_G0025940.1 mouse_genomes_project 2 100582907 100583843 + MGP_NODShiLtJ_P0055625 Olfr1258 protein_coding protein_coding MGP_NODShiLtJ_T0056134.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116954737 117003273 - MGP_NODShiLtJ_P0056134 Caprin1 protein_coding protein_coding MGP_NODShiLtJ_T0056135.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116956814 117002728 - MGP_NODShiLtJ_P0056135 Caprin1 protein_coding protein_coding MGP_NODShiLtJ_T0056136.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116958903 116964578 - MGP_NODShiLtJ_P0056136 Caprin1 protein_coding protein_coding MGP_NODShiLtJ_T0056137.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116959608 116963590 - MGP_NODShiLtJ_P0056137 Caprin1 protein_coding protein_coding MGP_NODShiLtJ_T0056138.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116960246 116964481 - Caprin1 protein_coding retained_intron MGP_NODShiLtJ_T0056139.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116963507 116966069 - Caprin1 protein_coding retained_intron MGP_NODShiLtJ_T0056140.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116964545 116965509 - Caprin1 protein_coding processed_transcript MGP_NODShiLtJ_T0056141.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116964794 116971157 - MGP_NODShiLtJ_P0056141 Caprin1 protein_coding protein_coding MGP_NODShiLtJ_T0056142.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116964797 116967806 - Caprin1 protein_coding retained_intron MGP_NODShiLtJ_T0056143.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116965268 116967452 - Caprin1 protein_coding processed_transcript MGP_NODShiLtJ_T0056144.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116969760 117002557 - Caprin1 protein_coding processed_transcript MGP_NODShiLtJ_T0056145.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116971312 117002168 - Caprin1 protein_coding processed_transcript MGP_NODShiLtJ_T0056146.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116977291 117002597 - Caprin1 protein_coding retained_intron MGP_NODShiLtJ_T0056147.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 116977689 117002492 - Caprin1 protein_coding processed_transcript MGP_NODShiLtJ_T0056148.1 MGP_NODShiLtJ_G0026031.1 mouse_genomes_project 2 117002075 117003223 - Caprin1 protein_coding retained_intron MGP_NODShiLtJ_T0054929.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141492 78193506 + MGP_NODShiLtJ_P0054929 Dync1i2 protein_coding protein_coding MGP_NODShiLtJ_T0054930.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141527 78193502 + MGP_NODShiLtJ_P0054930 Dync1i2 protein_coding protein_coding MGP_NODShiLtJ_T0054931.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141527 78193511 + MGP_NODShiLtJ_P0054931 Dync1i2 protein_coding protein_coding MGP_NODShiLtJ_T0054932.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141544 78193499 + MGP_NODShiLtJ_P0054932 Dync1i2 protein_coding protein_coding MGP_NODShiLtJ_T0054933.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141592 78177514 + Dync1i2 protein_coding processed_transcript MGP_NODShiLtJ_T0054934.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141620 78193511 + MGP_NODShiLtJ_P0054934 Dync1i2 protein_coding protein_coding MGP_NODShiLtJ_T0054935.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141758 78193505 + MGP_NODShiLtJ_P0054935 Dync1i2 protein_coding protein_coding MGP_NODShiLtJ_T0054936.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141770 78193067 + MGP_NODShiLtJ_P0054936 Dync1i2 protein_coding protein_coding MGP_NODShiLtJ_T0054937.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141778 78193511 + MGP_NODShiLtJ_P0054937 Dync1i2 protein_coding protein_coding MGP_NODShiLtJ_T0054938.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78141790 78160799 + Dync1i2 protein_coding retained_intron MGP_NODShiLtJ_T0054939.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78165387 78190551 + Dync1i2 protein_coding retained_intron MGP_NODShiLtJ_T0054940.1 MGP_NODShiLtJ_G0025655.1 mouse_genomes_project 2 78190752 78193266 + Dync1i2 protein_coding retained_intron MGP_NODShiLtJ_T0004137.1 MGP_NODShiLtJ_G0003646.1 mouse_genomes_project 2 201851108 201858996 + Gata5os antisense antisense MGP_NODShiLtJ_T0010308.1 MGP_NODShiLtJ_G0008441.1 mouse_genomes_project 2 39716734 39716823 + Mir181b-2 miRNA miRNA MGP_NODShiLtJ_T0054419.1 MGP_NODShiLtJ_G0025561.1 mouse_genomes_project 2 53703320 53836202 + MGP_NODShiLtJ_P0054419 Lypd6 protein_coding protein_coding MGP_NODShiLtJ_T0054420.1 MGP_NODShiLtJ_G0025561.1 mouse_genomes_project 2 53703353 53833303 + MGP_NODShiLtJ_P0054420 Lypd6 protein_coding protein_coding MGP_NODShiLtJ_T0054421.1 MGP_NODShiLtJ_G0025561.1 mouse_genomes_project 2 53703355 53836197 + MGP_NODShiLtJ_P0054421 Lypd6 protein_coding protein_coding MGP_NODShiLtJ_T0054422.1 MGP_NODShiLtJ_G0025561.1 mouse_genomes_project 2 53767304 53836196 + MGP_NODShiLtJ_P0054422 Lypd6 protein_coding protein_coding MGP_NODShiLtJ_T0054423.1 MGP_NODShiLtJ_G0025561.1 mouse_genomes_project 2 53806828 53814928 + MGP_NODShiLtJ_P0054423 Lypd6 protein_coding protein_coding MGP_NODShiLtJ_T0055442.1 MGP_NODShiLtJ_G0025778.1 mouse_genomes_project 2 94964833 94965869 + MGP_NODShiLtJ_P0055442 Olfr1025-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0055443.1 MGP_NODShiLtJ_G0025778.1 mouse_genomes_project 2 94964833 94965887 + MGP_NODShiLtJ_P0055443 Olfr1025-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0004063.1 MGP_NODShiLtJ_G0003588.1 mouse_genomes_project 2 163944246 163948577 - Gm14092 antisense antisense MGP_NODShiLtJ_T0013525.1 MGP_NODShiLtJ_G0011633.1 mouse_genomes_project 2 96736772 96737307 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056900.1 MGP_NODShiLtJ_G0026210.1 mouse_genomes_project 2 137170325 137175710 + MGP_NODShiLtJ_P0056900 Serf2 protein_coding protein_coding MGP_NODShiLtJ_T0056901.1 MGP_NODShiLtJ_G0026210.1 mouse_genomes_project 2 137170498 137175295 + Serf2 protein_coding retained_intron MGP_NODShiLtJ_T0056902.1 MGP_NODShiLtJ_G0026210.1 mouse_genomes_project 2 137170508 137172440 + MGP_NODShiLtJ_P0056902 Serf2 protein_coding protein_coding MGP_NODShiLtJ_T0056903.1 MGP_NODShiLtJ_G0026210.1 mouse_genomes_project 2 137170513 137172204 + MGP_NODShiLtJ_P0056903 Serf2 protein_coding protein_coding MGP_NODShiLtJ_T0056904.1 MGP_NODShiLtJ_G0026210.1 mouse_genomes_project 2 137170542 137181952 + MGP_NODShiLtJ_P0056904 Serf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056905.1 MGP_NODShiLtJ_G0026210.1 mouse_genomes_project 2 137170542 137181950 + MGP_NODShiLtJ_P0056905 Serf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013396.1 MGP_NODShiLtJ_G0011504.1 mouse_genomes_project 2 42309867 42310831 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057830.1 MGP_NODShiLtJ_G0026431.1 mouse_genomes_project 2 167409971 167415189 + MGP_NODShiLtJ_P0057830 8030411F24Rik protein_coding protein_coding MGP_NODShiLtJ_T0056917.1 MGP_NODShiLtJ_G0026213.1 mouse_genomes_project 2 137188471 137200470 - MGP_NODShiLtJ_P0056917 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0007363.1 MGP_NODShiLtJ_G0006030.1 mouse_genomes_project 2 191174528 191176133 - Gm17619 lincRNA lincRNA MGP_NODShiLtJ_T0017712.1 MGP_NODShiLtJ_G0015333.1 mouse_genomes_project 2 141339757 141350445 - Gm14004 processed_transcript processed_transcript MGP_NODShiLtJ_T0052139.1 MGP_NODShiLtJ_G0025168.1 mouse_genomes_project 2 3410065 3433394 - MGP_NODShiLtJ_P0052139 Echdc3 protein_coding protein_coding MGP_NODShiLtJ_T0052140.1 MGP_NODShiLtJ_G0025168.1 mouse_genomes_project 2 3411109 3417805 - Echdc3 protein_coding processed_transcript MGP_NODShiLtJ_T0052141.1 MGP_NODShiLtJ_G0025168.1 mouse_genomes_project 2 3426367 3433340 - Echdc3 protein_coding retained_intron MGP_NODShiLtJ_T0017704.1 MGP_NODShiLtJ_G0015331.1 mouse_genomes_project 2 138556482 138558609 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017705.1 MGP_NODShiLtJ_G0015331.1 mouse_genomes_project 2 138556503 138577051 + processed_transcript processed_transcript MGP_NODShiLtJ_T0013409.1 MGP_NODShiLtJ_G0011517.1 mouse_genomes_project 2 52885618 52886393 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007256.1 MGP_NODShiLtJ_G0005941.1 mouse_genomes_project 2 135160418 135167609 + 1700020I14Rik lincRNA lincRNA MGP_NODShiLtJ_T0007257.1 MGP_NODShiLtJ_G0005941.1 mouse_genomes_project 2 135160424 135175911 + 1700020I14Rik lincRNA lincRNA MGP_NODShiLtJ_T0053440.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30132203 30164585 - MGP_NODShiLtJ_P0053440 Zer1 protein_coding protein_coding MGP_NODShiLtJ_T0053441.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30132203 30164457 - MGP_NODShiLtJ_P0053441 Zer1 protein_coding protein_coding MGP_NODShiLtJ_T0053442.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30139032 30141003 - Zer1 protein_coding retained_intron MGP_NODShiLtJ_T0053443.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30139688 30141972 - Zer1 protein_coding retained_intron MGP_NODShiLtJ_T0053444.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30144538 30164588 - Zer1 protein_coding retained_intron MGP_NODShiLtJ_T0053445.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30144799 30164582 - Zer1 protein_coding retained_intron MGP_NODShiLtJ_T0053446.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30146030 30150771 - Zer1 protein_coding retained_intron MGP_NODShiLtJ_T0053447.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30146407 30146873 - Zer1 protein_coding processed_transcript MGP_NODShiLtJ_T0053448.1 MGP_NODShiLtJ_G0025392.1 mouse_genomes_project 2 30146745 30147773 - Zer1 protein_coding retained_intron MGP_NODShiLtJ_T0059348.1 MGP_NODShiLtJ_G0026796.1 mouse_genomes_project 2 200886885 201372821 + MGP_NODShiLtJ_P0059348 Cdh4 protein_coding protein_coding MGP_NODShiLtJ_T0059349.1 MGP_NODShiLtJ_G0026796.1 mouse_genomes_project 2 200887076 201317866 + MGP_NODShiLtJ_P0059349 Cdh4 protein_coding protein_coding MGP_NODShiLtJ_T0059350.1 MGP_NODShiLtJ_G0026796.1 mouse_genomes_project 2 200888661 201246533 + Cdh4 protein_coding processed_transcript MGP_NODShiLtJ_T0059351.1 MGP_NODShiLtJ_G0026796.1 mouse_genomes_project 2 201242153 201265880 + Cdh4 protein_coding processed_transcript MGP_NODShiLtJ_T0059352.1 MGP_NODShiLtJ_G0026796.1 mouse_genomes_project 2 201367323 201369589 + Cdh4 protein_coding retained_intron MGP_NODShiLtJ_T0059353.1 MGP_NODShiLtJ_G0026796.1 mouse_genomes_project 2 201367348 201368133 + MGP_NODShiLtJ_P0059353 Cdh4 protein_coding protein_coding MGP_NODShiLtJ_T0054977.1 MGP_NODShiLtJ_G0025664.1 mouse_genomes_project 2 78908936 78940114 + MGP_NODShiLtJ_P0054977 Pdk1 protein_coding protein_coding MGP_NODShiLtJ_T0054978.1 MGP_NODShiLtJ_G0025664.1 mouse_genomes_project 2 78909032 78920109 + Pdk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054979.1 MGP_NODShiLtJ_G0025664.1 mouse_genomes_project 2 78909038 78922531 + Pdk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054980.1 MGP_NODShiLtJ_G0025664.1 mouse_genomes_project 2 78909058 78938223 + Pdk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054981.1 MGP_NODShiLtJ_G0025664.1 mouse_genomes_project 2 78909257 78920360 + Pdk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054982.1 MGP_NODShiLtJ_G0025664.1 mouse_genomes_project 2 78909449 78925184 + Pdk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054983.1 MGP_NODShiLtJ_G0025664.1 mouse_genomes_project 2 78910799 78919788 + Pdk1 protein_coding processed_transcript MGP_NODShiLtJ_T0054984.1 MGP_NODShiLtJ_G0025664.1 mouse_genomes_project 2 78923647 78932709 + Pdk1 protein_coding processed_transcript MGP_NODShiLtJ_T0052344.1 MGP_NODShiLtJ_G0025197.1 mouse_genomes_project 2 12025350 12244465 - MGP_NODShiLtJ_P0052344 Hacd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052345.1 MGP_NODShiLtJ_G0025197.1 mouse_genomes_project 2 12218021 12244296 - MGP_NODShiLtJ_P0052345 Hacd1 protein_coding protein_coding MGP_NODShiLtJ_T0057025.1 MGP_NODShiLtJ_G0026240.1 mouse_genomes_project 2 141281922 141302487 + MGP_NODShiLtJ_P0057025 Slc24a5 protein_coding protein_coding MGP_NODShiLtJ_T0057026.1 MGP_NODShiLtJ_G0026240.1 mouse_genomes_project 2 141283040 141297032 + Slc24a5 protein_coding processed_transcript MGP_NODShiLtJ_T0057027.1 MGP_NODShiLtJ_G0026240.1 mouse_genomes_project 2 141294156 141296885 + Slc24a5 protein_coding retained_intron MGP_NODShiLtJ_T0055555.1 MGP_NODShiLtJ_G0025879.1 mouse_genomes_project 2 98561435 98562359 - MGP_NODShiLtJ_P0055555 Olfr1179 protein_coding protein_coding MGP_NODShiLtJ_T0007093.1 MGP_NODShiLtJ_G0005812.1 mouse_genomes_project 2 20166931 20190470 + Gm13376 lincRNA lincRNA MGP_NODShiLtJ_T0054703.1 MGP_NODShiLtJ_G0025612.1 mouse_genomes_project 2 71064378 71069107 - Grb14 protein_coding processed_transcript MGP_NODShiLtJ_T0054704.1 MGP_NODShiLtJ_G0025612.1 mouse_genomes_project 2 71064378 71071403 - MGP_NODShiLtJ_P0054704 Grb14 protein_coding protein_coding MGP_NODShiLtJ_T0054705.1 MGP_NODShiLtJ_G0025612.1 mouse_genomes_project 2 71064378 71197579 - MGP_NODShiLtJ_P0054705 Grb14 protein_coding protein_coding MGP_NODShiLtJ_T0054706.1 MGP_NODShiLtJ_G0025612.1 mouse_genomes_project 2 71064378 71071328 - MGP_NODShiLtJ_P0054706 Grb14 protein_coding protein_coding MGP_NODShiLtJ_T0054707.1 MGP_NODShiLtJ_G0025612.1 mouse_genomes_project 2 71083654 71090499 - Grb14 protein_coding processed_transcript MGP_NODShiLtJ_T0054708.1 MGP_NODShiLtJ_G0025612.1 mouse_genomes_project 2 71085120 71135254 - MGP_NODShiLtJ_P0054708 Grb14 protein_coding protein_coding MGP_NODShiLtJ_T0054709.1 MGP_NODShiLtJ_G0025612.1 mouse_genomes_project 2 71092339 71135231 - Grb14 protein_coding processed_transcript MGP_NODShiLtJ_T0054710.1 MGP_NODShiLtJ_G0025612.1 mouse_genomes_project 2 71197464 71200207 - Grb14 protein_coding processed_transcript MGP_NODShiLtJ_T0007327.1 MGP_NODShiLtJ_G0006000.1 mouse_genomes_project 2 183348629 183353323 - Gm14254 lincRNA lincRNA MGP_NODShiLtJ_T0058911.1 MGP_NODShiLtJ_G0026698.1 mouse_genomes_project 2 185198157 185216316 - MGP_NODShiLtJ_P0058911 Pltp protein_coding protein_coding MGP_NODShiLtJ_T0058912.1 MGP_NODShiLtJ_G0026698.1 mouse_genomes_project 2 185198157 185216394 - MGP_NODShiLtJ_P0058912 Pltp protein_coding protein_coding MGP_NODShiLtJ_T0058913.1 MGP_NODShiLtJ_G0026698.1 mouse_genomes_project 2 185198157 185216225 - MGP_NODShiLtJ_P0058913 Pltp protein_coding protein_coding MGP_NODShiLtJ_T0058914.1 MGP_NODShiLtJ_G0026698.1 mouse_genomes_project 2 185205617 185215479 - Pltp protein_coding retained_intron MGP_NODShiLtJ_T0058915.1 MGP_NODShiLtJ_G0026698.1 mouse_genomes_project 2 185211156 185216309 - Pltp protein_coding processed_transcript MGP_NODShiLtJ_T0058916.1 MGP_NODShiLtJ_G0026698.1 mouse_genomes_project 2 185211293 185216303 - MGP_NODShiLtJ_P0058916 Pltp protein_coding protein_coding MGP_NODShiLtJ_T0058917.1 MGP_NODShiLtJ_G0026698.1 mouse_genomes_project 2 185213004 185216313 - MGP_NODShiLtJ_P0058917 Pltp protein_coding protein_coding MGP_NODShiLtJ_T0055450.1 MGP_NODShiLtJ_G0025785.1 mouse_genomes_project 2 95177625 95186766 + MGP_NODShiLtJ_P0055450 protein_coding protein_coding MGP_NODShiLtJ_T0007221.1 MGP_NODShiLtJ_G0005913.1 mouse_genomes_project 2 116495012 116532913 - A930006I01Rik lincRNA lincRNA MGP_NODShiLtJ_T0010315.1 MGP_NODShiLtJ_G0008448.1 mouse_genomes_project 2 74218158 74218218 + Mir7224 miRNA miRNA MGP_NODShiLtJ_T0010381.1 MGP_NODShiLtJ_G0008514.1 mouse_genomes_project 2 189465207 189465271 - Mir7004 miRNA miRNA MGP_NODShiLtJ_T0007094.1 MGP_NODShiLtJ_G0005813.1 mouse_genomes_project 2 21927436 21933325 + 1700092C17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007095.1 MGP_NODShiLtJ_G0005813.1 mouse_genomes_project 2 21933023 21933293 + 1700092C17Rik lincRNA lincRNA MGP_NODShiLtJ_T0013496.1 MGP_NODShiLtJ_G0011604.1 mouse_genomes_project 2 85510149 85510943 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013749.1 MGP_NODShiLtJ_G0011857.1 mouse_genomes_project 2 188251539 188251816 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013445.1 MGP_NODShiLtJ_G0011553.1 mouse_genomes_project 2 65264799 65265193 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007288.1 MGP_NODShiLtJ_G0005968.1 mouse_genomes_project 2 165335037 165346460 - Gm14114 lincRNA lincRNA MGP_NODShiLtJ_T0011408.1 MGP_NODShiLtJ_G0009541.1 mouse_genomes_project 2 165836787 165837245 + Nkx2-2os misc_RNA misc_RNA MGP_NODShiLtJ_T0017643.1 MGP_NODShiLtJ_G0015298.1 mouse_genomes_project 2 80554475 80589419 + D230022J07Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017606.1 MGP_NODShiLtJ_G0015274.1 mouse_genomes_project 2 27336311 27339255 + Gm13421 processed_transcript processed_transcript MGP_NODShiLtJ_T0017607.1 MGP_NODShiLtJ_G0015274.1 mouse_genomes_project 2 27336314 27339077 + Gm13421 processed_transcript processed_transcript MGP_NODShiLtJ_T0053340.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29759533 29788621 - MGP_NODShiLtJ_P0053340 Trub2 protein_coding protein_coding MGP_NODShiLtJ_T0053342.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29776051 29788633 - MGP_NODShiLtJ_P0053342 Trub2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053343.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29777477 29789475 - MGP_NODShiLtJ_P0053343 Trub2 protein_coding protein_coding MGP_NODShiLtJ_T0053344.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29778700 29788607 - MGP_NODShiLtJ_P0053344 Trub2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053345.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29778769 29788595 - MGP_NODShiLtJ_P0053345 Trub2 protein_coding protein_coding MGP_NODShiLtJ_T0053346.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29779606 29788644 - MGP_NODShiLtJ_P0053346 Trub2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053347.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29779765 29783319 - Trub2 protein_coding retained_intron MGP_NODShiLtJ_T0053348.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29780220 29783173 - Trub2 protein_coding retained_intron MGP_NODShiLtJ_T0053349.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29784195 29788603 - Trub2 protein_coding retained_intron MGP_NODShiLtJ_T0053350.1 MGP_NODShiLtJ_G0025380.1 mouse_genomes_project 2 29785896 29788606 - Trub2 protein_coding retained_intron MGP_NODShiLtJ_T0010385.1 MGP_NODShiLtJ_G0008518.1 mouse_genomes_project 2 195605966 195606034 + Gm27591 miRNA miRNA MGP_NODShiLtJ_T0010263.1 MGP_NODShiLtJ_G0008396.1 mouse_genomes_project 2 8363128 8363208 + Mir466g miRNA miRNA MGP_NODShiLtJ_T0013707.1 MGP_NODShiLtJ_G0011815.1 mouse_genomes_project 2 174157379 174157600 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100395.1 MGP_NODShiLtJ_G0038789.1 mouse_genomes_project 2 146602583 146602670 + Gm22424 snoRNA snoRNA MGP_NODShiLtJ_T0099117.1 MGP_NODShiLtJ_G0037511.1 mouse_genomes_project 2 88901027 88901134 - Gm23452 snRNA snRNA MGP_NODShiLtJ_T0057945.1 MGP_NODShiLtJ_G0026465.1 mouse_genomes_project 2 170956461 170989006 + MGP_NODShiLtJ_P0057945 Rspo4 protein_coding protein_coding MGP_NODShiLtJ_T0053955.1 MGP_NODShiLtJ_G0025467.1 mouse_genomes_project 2 33260661 33269726 - Slc2a8 protein_coding retained_intron MGP_NODShiLtJ_T0053956.1 MGP_NODShiLtJ_G0025467.1 mouse_genomes_project 2 33260661 33269740 - MGP_NODShiLtJ_P0053956 Slc2a8 protein_coding protein_coding MGP_NODShiLtJ_T0053957.1 MGP_NODShiLtJ_G0025467.1 mouse_genomes_project 2 33261256 33269675 - MGP_NODShiLtJ_P0053957 Slc2a8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053958.1 MGP_NODShiLtJ_G0025467.1 mouse_genomes_project 2 33261256 33269675 - MGP_NODShiLtJ_P0053958 Slc2a8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053959.1 MGP_NODShiLtJ_G0025467.1 mouse_genomes_project 2 33261256 33269675 - MGP_NODShiLtJ_P0053959 Slc2a8 protein_coding protein_coding MGP_NODShiLtJ_T0053960.1 MGP_NODShiLtJ_G0025467.1 mouse_genomes_project 2 33263598 33269729 - MGP_NODShiLtJ_P0053960 Slc2a8 protein_coding protein_coding MGP_NODShiLtJ_T0053961.1 MGP_NODShiLtJ_G0025467.1 mouse_genomes_project 2 33264582 33269677 - Slc2a8 protein_coding retained_intron MGP_NODShiLtJ_T0053962.1 MGP_NODShiLtJ_G0025467.1 mouse_genomes_project 2 33269143 33269741 - Slc2a8 protein_coding processed_transcript MGP_NODShiLtJ_T0098191.1 MGP_NODShiLtJ_G0036603.1 mouse_genomes_project 2 120306758 120306882 + Gm22813 scaRNA scaRNA MGP_NODShiLtJ_T0058735.1 MGP_NODShiLtJ_G0026640.1 mouse_genomes_project 2 183545784 183611667 - MGP_NODShiLtJ_P0058735 Jph2 protein_coding protein_coding MGP_NODShiLtJ_T0058736.1 MGP_NODShiLtJ_G0026640.1 mouse_genomes_project 2 183545784 183611711 - MGP_NODShiLtJ_P0058736 Jph2 protein_coding protein_coding MGP_NODShiLtJ_T0055862.1 MGP_NODShiLtJ_G0025983.1 mouse_genomes_project 2 102878739 102880619 - MGP_NODShiLtJ_P0055862 Mdk protein_coding protein_coding MGP_NODShiLtJ_T0055863.1 MGP_NODShiLtJ_G0025983.1 mouse_genomes_project 2 102878762 102881222 - MGP_NODShiLtJ_P0055863 Mdk protein_coding protein_coding MGP_NODShiLtJ_T0055864.1 MGP_NODShiLtJ_G0025983.1 mouse_genomes_project 2 102878762 102880708 - MGP_NODShiLtJ_P0055864 Mdk protein_coding protein_coding MGP_NODShiLtJ_T0055865.1 MGP_NODShiLtJ_G0025983.1 mouse_genomes_project 2 102878900 102880630 - MGP_NODShiLtJ_P0055865 Mdk protein_coding protein_coding MGP_NODShiLtJ_T0013580.1 MGP_NODShiLtJ_G0011688.1 mouse_genomes_project 2 117051704 117051946 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013576.1 MGP_NODShiLtJ_G0011684.1 mouse_genomes_project 2 116729012 116729442 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055495.1 MGP_NODShiLtJ_G0025830.1 mouse_genomes_project 2 96842213 96843170 + MGP_NODShiLtJ_P0055495 Olfr1112 protein_coding protein_coding MGP_NODShiLtJ_T0058533.1 MGP_NODShiLtJ_G0026598.1 mouse_genomes_project 2 176883519 176966771 - MGP_NODShiLtJ_P0058533 Mroh8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0058534.1 MGP_NODShiLtJ_G0026598.1 mouse_genomes_project 2 176883525 176967489 - MGP_NODShiLtJ_P0058534 Mroh8 protein_coding protein_coding MGP_NODShiLtJ_T0058535.1 MGP_NODShiLtJ_G0026598.1 mouse_genomes_project 2 176899824 176901238 - Mroh8 protein_coding processed_transcript MGP_NODShiLtJ_T0058536.1 MGP_NODShiLtJ_G0026598.1 mouse_genomes_project 2 176922141 176967229 - Mroh8 protein_coding processed_transcript MGP_NODShiLtJ_T0058537.1 MGP_NODShiLtJ_G0026598.1 mouse_genomes_project 2 176938122 176942105 - Mroh8 protein_coding processed_transcript MGP_NODShiLtJ_T0058538.1 MGP_NODShiLtJ_G0026598.1 mouse_genomes_project 2 176952095 176967489 - Mroh8 protein_coding processed_transcript MGP_NODShiLtJ_T0055541.1 MGP_NODShiLtJ_G0025866.1 mouse_genomes_project 2 98037965 98046187 - MGP_NODShiLtJ_P0055541 protein_coding protein_coding MGP_NODShiLtJ_T0013733.1 MGP_NODShiLtJ_G0011841.1 mouse_genomes_project 2 181288927 181289931 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056417.1 MGP_NODShiLtJ_G0026121.1 mouse_genomes_project 2 130772180 130980357 + MGP_NODShiLtJ_P0056417 BC052040 protein_coding protein_coding MGP_NODShiLtJ_T0056418.1 MGP_NODShiLtJ_G0026121.1 mouse_genomes_project 2 130772197 130980357 + MGP_NODShiLtJ_P0056418 BC052040 protein_coding protein_coding MGP_NODShiLtJ_T0056419.1 MGP_NODShiLtJ_G0026121.1 mouse_genomes_project 2 130772265 130834631 + BC052040 protein_coding processed_transcript MGP_NODShiLtJ_T0013592.1 MGP_NODShiLtJ_G0011700.1 mouse_genomes_project 2 120508958 120509456 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013376.1 MGP_NODShiLtJ_G0011484.1 mouse_genomes_project 2 37704747 37705156 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0056954.1 MGP_NODShiLtJ_G0026221.1 mouse_genomes_project 2 137857037 137924263 - MGP_NODShiLtJ_P0056954 Spg11 protein_coding protein_coding MGP_NODShiLtJ_T0056955.1 MGP_NODShiLtJ_G0026221.1 mouse_genomes_project 2 137857478 137924191 - MGP_NODShiLtJ_P0056955 Spg11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0056956.1 MGP_NODShiLtJ_G0026221.1 mouse_genomes_project 2 137895902 137924173 - Spg11 protein_coding processed_transcript MGP_NODShiLtJ_T0056957.1 MGP_NODShiLtJ_G0026221.1 mouse_genomes_project 2 137910799 137924252 - Spg11 protein_coding processed_transcript MGP_NODShiLtJ_T0058031.1 MGP_NODShiLtJ_G0026499.1 mouse_genomes_project 2 172108678 172123520 + MGP_NODShiLtJ_P0058031 Mylk2 protein_coding protein_coding MGP_NODShiLtJ_T0055654.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101557486 101598863 + MGP_NODShiLtJ_P0055654 Fnbp4 protein_coding protein_coding MGP_NODShiLtJ_T0055655.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101557720 101593185 + Fnbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055656.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101566928 101574089 + Fnbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055657.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101574238 101580410 + Fnbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055658.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101575041 101584481 + Fnbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055659.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101580097 101584702 + Fnbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055660.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101584730 101593079 + Fnbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055661.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101585287 101593168 + Fnbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0055662.1 MGP_NODShiLtJ_G0025955.1 mouse_genomes_project 2 101592252 101593076 + Fnbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0101814.1 MGP_NODShiLtJ_G0039982.1 mouse_genomes_project 2 95859064 95860601 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007201.1 MGP_NODShiLtJ_G0005899.1 mouse_genomes_project 2 103018136 103022515 - 2900072N19Rik lincRNA lincRNA MGP_NODShiLtJ_T0001062.1 MGP_NODShiLtJ_G0000988.1 mouse_genomes_project 2 77411276 77411997 - TEC TEC MGP_NODShiLtJ_T0017734.1 MGP_NODShiLtJ_G0015344.1 mouse_genomes_project 2 164078679 164119451 + BC039771 processed_transcript processed_transcript MGP_NODShiLtJ_T0017735.1 MGP_NODShiLtJ_G0015344.1 mouse_genomes_project 2 164105655 164159291 + BC039771 processed_transcript processed_transcript MGP_NODShiLtJ_T0007173.1 MGP_NODShiLtJ_G0005875.1 mouse_genomes_project 2 81338058 81339171 - A630050E04Rik lincRNA lincRNA MGP_NODShiLtJ_T0010302.1 MGP_NODShiLtJ_G0008435.1 mouse_genomes_project 2 32989766 32989848 - Mir2861 miRNA miRNA MGP_NODShiLtJ_T0058894.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185191695 185198659 + MGP_NODShiLtJ_P0058894 Ctsa protein_coding protein_coding MGP_NODShiLtJ_T0058895.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185191695 185199712 + MGP_NODShiLtJ_P0058895 Ctsa protein_coding protein_coding MGP_NODShiLtJ_T0058896.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185191709 185192582 + Ctsa protein_coding processed_transcript MGP_NODShiLtJ_T0058897.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185191723 185199712 + MGP_NODShiLtJ_P0058897 Ctsa protein_coding protein_coding MGP_NODShiLtJ_T0058898.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185191731 185192885 + MGP_NODShiLtJ_P0058898 Ctsa protein_coding protein_coding MGP_NODShiLtJ_T0058899.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185191748 185192602 + Ctsa protein_coding processed_transcript MGP_NODShiLtJ_T0058900.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185191748 185194514 + MGP_NODShiLtJ_P0058900 Ctsa protein_coding protein_coding MGP_NODShiLtJ_T0058901.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185192629 185193244 + Ctsa protein_coding retained_intron MGP_NODShiLtJ_T0058902.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185192637 185195611 + MGP_NODShiLtJ_P0058902 Ctsa protein_coding protein_coding MGP_NODShiLtJ_T0058903.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185192669 185193697 + Ctsa protein_coding retained_intron MGP_NODShiLtJ_T0058904.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185192680 185195086 + MGP_NODShiLtJ_P0058904 Ctsa protein_coding protein_coding MGP_NODShiLtJ_T0058905.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185192852 185194016 + Ctsa protein_coding retained_intron MGP_NODShiLtJ_T0058906.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185192852 185195644 + Ctsa protein_coding retained_intron MGP_NODShiLtJ_T0058907.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185192895 185195081 + Ctsa protein_coding retained_intron MGP_NODShiLtJ_T0058908.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185193132 185194544 + Ctsa protein_coding processed_transcript MGP_NODShiLtJ_T0058909.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185193295 185194292 + Ctsa protein_coding retained_intron MGP_NODShiLtJ_T0058910.1 MGP_NODShiLtJ_G0026697.1 mouse_genomes_project 2 185195790 185196300 + Ctsa protein_coding retained_intron MGP_NODShiLtJ_T0011400.1 MGP_NODShiLtJ_G0009533.1 mouse_genomes_project 2 129218433 129218751 + Gm25103 misc_RNA misc_RNA MGP_NODShiLtJ_T0003928.1 MGP_NODShiLtJ_G0003497.1 mouse_genomes_project 2 67970989 68104258 + Gm13561 antisense antisense MGP_NODShiLtJ_T0056084.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115930541 116027677 - MGP_NODShiLtJ_P0056084 Cd44 protein_coding protein_coding MGP_NODShiLtJ_T0056085.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115930541 116027717 - MGP_NODShiLtJ_P0056085 Cd44 protein_coding protein_coding MGP_NODShiLtJ_T0056086.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115931933 116027547 - MGP_NODShiLtJ_P0056086 Cd44 protein_coding protein_coding MGP_NODShiLtJ_T0056087.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115931952 116027562 - MGP_NODShiLtJ_P0056087 Cd44 protein_coding protein_coding MGP_NODShiLtJ_T0056088.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115933501 116027421 - MGP_NODShiLtJ_P0056088 Cd44 protein_coding protein_coding MGP_NODShiLtJ_T0056089.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115933501 116027402 - MGP_NODShiLtJ_P0056089 Cd44 protein_coding protein_coding MGP_NODShiLtJ_T0056090.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115933511 116027402 - MGP_NODShiLtJ_P0056090 Cd44 protein_coding protein_coding MGP_NODShiLtJ_T0056091.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115933514 116027398 - MGP_NODShiLtJ_P0056091 Cd44 protein_coding protein_coding MGP_NODShiLtJ_T0056092.1 MGP_NODShiLtJ_G0026023.1 mouse_genomes_project 2 115973820 116027510 - Cd44 protein_coding retained_intron MGP_NODShiLtJ_T0003934.1 MGP_NODShiLtJ_G0003503.1 mouse_genomes_project 2 72203510 72214415 - Gm13617 antisense antisense MGP_NODShiLtJ_T0055020.1 MGP_NODShiLtJ_G0025672.1 mouse_genomes_project 2 80446678 80479013 - MGP_NODShiLtJ_P0055020 Cir1 protein_coding protein_coding MGP_NODShiLtJ_T0055021.1 MGP_NODShiLtJ_G0025672.1 mouse_genomes_project 2 80472230 80478878 - Cir1 protein_coding processed_transcript MGP_NODShiLtJ_T0053458.1 MGP_NODShiLtJ_G0025395.1 mouse_genomes_project 2 30219708 30224685 - D2Wsu81e protein_coding retained_intron MGP_NODShiLtJ_T0053459.1 MGP_NODShiLtJ_G0025395.1 mouse_genomes_project 2 30219708 30224698 - D2Wsu81e protein_coding retained_intron MGP_NODShiLtJ_T0053460.1 MGP_NODShiLtJ_G0025395.1 mouse_genomes_project 2 30219723 30223761 - D2Wsu81e protein_coding retained_intron MGP_NODShiLtJ_T0053461.1 MGP_NODShiLtJ_G0025395.1 mouse_genomes_project 2 30219726 30224240 - D2Wsu81e protein_coding retained_intron MGP_NODShiLtJ_T0053462.1 MGP_NODShiLtJ_G0025395.1 mouse_genomes_project 2 30219726 30224706 - MGP_NODShiLtJ_P0053462 D2Wsu81e protein_coding protein_coding MGP_NODShiLtJ_T0053463.1 MGP_NODShiLtJ_G0025395.1 mouse_genomes_project 2 30219728 30224715 - D2Wsu81e protein_coding retained_intron MGP_NODShiLtJ_T0053464.1 MGP_NODShiLtJ_G0025395.1 mouse_genomes_project 2 30221186 30224221 - D2Wsu81e protein_coding processed_transcript MGP_NODShiLtJ_T0053465.1 MGP_NODShiLtJ_G0025395.1 mouse_genomes_project 2 30222618 30224711 - D2Wsu81e protein_coding retained_intron MGP_NODShiLtJ_T0056410.1 MGP_NODShiLtJ_G0026119.1 mouse_genomes_project 2 129120793 129128757 - MGP_NODShiLtJ_P0056410 Zfp770 protein_coding protein_coding MGP_NODShiLtJ_T0056411.1 MGP_NODShiLtJ_G0026119.1 mouse_genomes_project 2 129125846 129128728 - Zfp770 protein_coding processed_transcript MGP_NODShiLtJ_T0057784.1 MGP_NODShiLtJ_G0026415.1 mouse_genomes_project 2 164636151 164640780 + MGP_NODShiLtJ_P0057784 Insm1 protein_coding protein_coding MGP_NODShiLtJ_T0013657.1 MGP_NODShiLtJ_G0011765.1 mouse_genomes_project 2 149836835 149837201 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058369.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175632734 175675071 - MGP_NODShiLtJ_P0058369 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058370.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175632737 175675024 - Cpne1 protein_coding retained_intron MGP_NODShiLtJ_T0058371.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175632737 175675075 - MGP_NODShiLtJ_P0058371 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058374.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175632739 175675079 - MGP_NODShiLtJ_P0058374 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058375.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175634230 175635193 - Cpne1 protein_coding processed_transcript MGP_NODShiLtJ_T0058376.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175634252 175675037 - MGP_NODShiLtJ_P0058376 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058377.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175634286 175637150 - MGP_NODShiLtJ_P0058377 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058378.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175634291 175637175 - Cpne1 protein_coding retained_intron MGP_NODShiLtJ_T0058379.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175634405 175675040 - MGP_NODShiLtJ_P0058379 Cpne1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058380.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175634410 175639058 - MGP_NODShiLtJ_P0058380 Cpne1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058381.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175634995 175637450 - Cpne1 protein_coding retained_intron MGP_NODShiLtJ_T0058382.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175635098 175675101 - MGP_NODShiLtJ_P0058382 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058383.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175638296 175675045 - MGP_NODShiLtJ_P0058383 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058384.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175638317 175639489 - Cpne1 protein_coding retained_intron MGP_NODShiLtJ_T0058385.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175639064 175675095 - MGP_NODShiLtJ_P0058385 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058386.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175639471 175675045 - MGP_NODShiLtJ_P0058386 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058387.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175639797 175674999 - MGP_NODShiLtJ_P0058387 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0058388.1 MGP_NODShiLtJ_G0026575.1 mouse_genomes_project 2 175639808 175665756 - MGP_NODShiLtJ_P0058388 Cpne1 protein_coding protein_coding MGP_NODShiLtJ_T0056694.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136050414 136072023 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056695.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136050719 136067864 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056696.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136050720 136109309 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056697.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136050728 136072788 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056698.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136050742 136112963 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056699.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136050832 136067862 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056700.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136050856 136064030 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056701.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136051286 136113809 + MGP_NODShiLtJ_P0056701 Ganc protein_coding protein_coding MGP_NODShiLtJ_T0056702.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136051292 136062733 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056703.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136051498 136112974 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056704.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136052644 136112336 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056705.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136059979 136086035 + Ganc protein_coding retained_intron MGP_NODShiLtJ_T0056706.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136071864 136080280 + Ganc protein_coding processed_transcript MGP_NODShiLtJ_T0056707.1 MGP_NODShiLtJ_G0026182.1 mouse_genomes_project 2 136104578 136112458 + Ganc protein_coding retained_intron MGP_NODShiLtJ_T0059120.1 MGP_NODShiLtJ_G0026734.1 mouse_genomes_project 2 188338060 188365533 - MGP_NODShiLtJ_P0059120 Ube2v1 protein_coding protein_coding MGP_NODShiLtJ_T0059121.1 MGP_NODShiLtJ_G0026734.1 mouse_genomes_project 2 188340505 188365417 - MGP_NODShiLtJ_P0059121 Ube2v1 protein_coding protein_coding MGP_NODShiLtJ_T0059122.1 MGP_NODShiLtJ_G0026734.1 mouse_genomes_project 2 188347940 188365420 - Ube2v1 protein_coding retained_intron MGP_NODShiLtJ_T0057803.1 MGP_NODShiLtJ_G0026419.1 mouse_genomes_project 2 165599132 165601259 - MGP_NODShiLtJ_P0057803 Nkx2-4 protein_coding protein_coding MGP_NODShiLtJ_T0053865.1 MGP_NODShiLtJ_G0025453.1 mouse_genomes_project 2 32890764 32904037 + MGP_NODShiLtJ_P0053865 Ak1 protein_coding protein_coding MGP_NODShiLtJ_T0053866.1 MGP_NODShiLtJ_G0025453.1 mouse_genomes_project 2 32894441 32904033 + MGP_NODShiLtJ_P0053866 Ak1 protein_coding protein_coding MGP_NODShiLtJ_T0053867.1 MGP_NODShiLtJ_G0025453.1 mouse_genomes_project 2 32894442 32900153 + MGP_NODShiLtJ_P0053867 Ak1 protein_coding protein_coding MGP_NODShiLtJ_T0053868.1 MGP_NODShiLtJ_G0025453.1 mouse_genomes_project 2 32897377 32900116 + MGP_NODShiLtJ_P0053868 Ak1 protein_coding protein_coding MGP_NODShiLtJ_T0053869.1 MGP_NODShiLtJ_G0025453.1 mouse_genomes_project 2 32898491 32904031 + MGP_NODShiLtJ_P0053869 Ak1 protein_coding protein_coding MGP_NODShiLtJ_T0053870.1 MGP_NODShiLtJ_G0025453.1 mouse_genomes_project 2 32898508 32902379 + Ak1 protein_coding retained_intron MGP_NODShiLtJ_T0058862.1 MGP_NODShiLtJ_G0026684.1 mouse_genomes_project 2 185014653 185017266 + MGP_NODShiLtJ_P0058862 Wfdc13 protein_coding protein_coding MGP_NODShiLtJ_T0057796.1 MGP_NODShiLtJ_G0026417.1 mouse_genomes_project 2 165363445 165482347 + MGP_NODShiLtJ_P0057796 Kiz protein_coding protein_coding MGP_NODShiLtJ_T0057797.1 MGP_NODShiLtJ_G0026417.1 mouse_genomes_project 2 165363490 165396793 + MGP_NODShiLtJ_P0057797 Kiz protein_coding protein_coding MGP_NODShiLtJ_T0057798.1 MGP_NODShiLtJ_G0026417.1 mouse_genomes_project 2 165464030 165482342 + Kiz protein_coding retained_intron MGP_NODShiLtJ_T0017671.1 MGP_NODShiLtJ_G0015317.1 mouse_genomes_project 2 117010070 117015904 - 4930547E08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0001011.1 MGP_NODShiLtJ_G0000937.1 mouse_genomes_project 2 10392425 10395488 - TEC TEC MGP_NODShiLtJ_T0007185.1 MGP_NODShiLtJ_G0005885.1 mouse_genomes_project 2 82796515 82804639 + Gm13658 lincRNA lincRNA MGP_NODShiLtJ_T0017694.1 MGP_NODShiLtJ_G0015326.1 mouse_genomes_project 2 133287380 133568623 - Gm13986 processed_transcript processed_transcript MGP_NODShiLtJ_T0017695.1 MGP_NODShiLtJ_G0015326.1 mouse_genomes_project 2 133527410 133568512 - Gm13986 processed_transcript processed_transcript MGP_NODShiLtJ_T0007189.1 MGP_NODShiLtJ_G0005889.1 mouse_genomes_project 2 85601264 85622822 + lincRNA lincRNA MGP_NODShiLtJ_T0007190.1 MGP_NODShiLtJ_G0005889.1 mouse_genomes_project 2 85601310 85751599 + lincRNA lincRNA MGP_NODShiLtJ_T0053845.1 MGP_NODShiLtJ_G0025450.1 mouse_genomes_project 2 32840125 32841136 + Pip5kl1 protein_coding processed_transcript MGP_NODShiLtJ_T0053846.1 MGP_NODShiLtJ_G0025450.1 mouse_genomes_project 2 32841046 32849106 + MGP_NODShiLtJ_P0053846 Pip5kl1 protein_coding protein_coding MGP_NODShiLtJ_T0053847.1 MGP_NODShiLtJ_G0025450.1 mouse_genomes_project 2 32841171 32849095 + MGP_NODShiLtJ_P0053847 Pip5kl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053848.1 MGP_NODShiLtJ_G0025450.1 mouse_genomes_project 2 32845250 32849096 + Pip5kl1 protein_coding retained_intron MGP_NODShiLtJ_T0053211.1 MGP_NODShiLtJ_G0025354.1 mouse_genomes_project 2 27481135 27551194 + MGP_NODShiLtJ_P0053211 Rxra protein_coding protein_coding MGP_NODShiLtJ_T0053212.1 MGP_NODShiLtJ_G0025354.1 mouse_genomes_project 2 27517761 27569474 + MGP_NODShiLtJ_P0053212 Rxra protein_coding protein_coding MGP_NODShiLtJ_T0053213.1 MGP_NODShiLtJ_G0025354.1 mouse_genomes_project 2 27519052 27569474 + MGP_NODShiLtJ_P0053213 Rxra protein_coding protein_coding MGP_NODShiLtJ_T0053214.1 MGP_NODShiLtJ_G0025354.1 mouse_genomes_project 2 27546594 27572237 + MGP_NODShiLtJ_P0053214 Rxra protein_coding protein_coding MGP_NODShiLtJ_T0053215.1 MGP_NODShiLtJ_G0025354.1 mouse_genomes_project 2 27546594 27570708 + MGP_NODShiLtJ_P0053215 Rxra protein_coding protein_coding MGP_NODShiLtJ_T0053216.1 MGP_NODShiLtJ_G0025354.1 mouse_genomes_project 2 27549496 27557962 + Rxra protein_coding processed_transcript MGP_NODShiLtJ_T0010336.1 MGP_NODShiLtJ_G0008469.1 mouse_genomes_project 2 105411608 105411708 - Mir670 miRNA miRNA MGP_NODShiLtJ_T0055983.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104926828 104945536 - MGP_NODShiLtJ_P0055983 Accs protein_coding protein_coding MGP_NODShiLtJ_T0055984.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104928806 104945274 - MGP_NODShiLtJ_P0055984 Accs protein_coding protein_coding MGP_NODShiLtJ_T0055985.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104928806 104945394 - MGP_NODShiLtJ_P0055985 Accs protein_coding protein_coding MGP_NODShiLtJ_T0055986.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104929356 104932680 - Accs protein_coding retained_intron MGP_NODShiLtJ_T0055987.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104930387 104945538 - Accs protein_coding retained_intron MGP_NODShiLtJ_T0055988.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104931379 104943526 - MGP_NODShiLtJ_P0055988 Accs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055989.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104932513 104935589 - Accs protein_coding retained_intron MGP_NODShiLtJ_T0055990.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104934600 104935702 - Accs protein_coding retained_intron MGP_NODShiLtJ_T0055991.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104935889 104945411 - MGP_NODShiLtJ_P0055991 Accs protein_coding protein_coding MGP_NODShiLtJ_T0055992.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104936118 104945534 - Accs protein_coding retained_intron MGP_NODShiLtJ_T0055993.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104936129 104945534 - Accs protein_coding retained_intron MGP_NODShiLtJ_T0055994.1 MGP_NODShiLtJ_G0026003.1 mouse_genomes_project 2 104940653 104941381 - Accs protein_coding processed_transcript MGP_NODShiLtJ_T0001052.1 MGP_NODShiLtJ_G0000978.1 mouse_genomes_project 2 39715882 39717885 - TEC TEC MGP_NODShiLtJ_T0052616.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24182833 24347225 - MGP_NODShiLtJ_P0052616 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0052617.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24182840 24347202 - MGP_NODShiLtJ_P0052617 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0052618.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24185321 24347120 - MGP_NODShiLtJ_P0052618 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0052619.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24185325 24186481 - MGP_NODShiLtJ_P0052619 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0052620.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24185516 24347120 - MGP_NODShiLtJ_P0052620 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0052621.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24185516 24347120 - MGP_NODShiLtJ_P0052621 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0052622.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24186937 24197268 - MGP_NODShiLtJ_P0052622 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0052623.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24188878 24217567 - MGP_NODShiLtJ_P0052623 Cacna1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052624.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24201930 24211317 - MGP_NODShiLtJ_P0052624 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0052625.1 MGP_NODShiLtJ_G0025249.1 mouse_genomes_project 2 24262315 24268684 - MGP_NODShiLtJ_P0052625 Cacna1b protein_coding protein_coding MGP_NODShiLtJ_T0057653.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141114 160529999 + MGP_NODShiLtJ_P0057653 Macrod2 protein_coding protein_coding MGP_NODShiLtJ_T0057654.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141161 160529999 + MGP_NODShiLtJ_P0057654 Macrod2 protein_coding protein_coding MGP_NODShiLtJ_T0057655.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141161 158524736 + MGP_NODShiLtJ_P0057655 Macrod2 protein_coding protein_coding MGP_NODShiLtJ_T0057656.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141235 158206052 + MGP_NODShiLtJ_P0057656 Macrod2 protein_coding protein_coding MGP_NODShiLtJ_T0057657.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141238 158678328 + Macrod2 protein_coding retained_intron MGP_NODShiLtJ_T0057658.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141240 160521431 + MGP_NODShiLtJ_P0057658 Macrod2 protein_coding protein_coding MGP_NODShiLtJ_T0057659.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141240 158206055 + MGP_NODShiLtJ_P0057659 Macrod2 protein_coding protein_coding MGP_NODShiLtJ_T0057660.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141247 158305630 + Macrod2 protein_coding processed_transcript MGP_NODShiLtJ_T0057661.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141261 158459285 + Macrod2 protein_coding processed_transcript MGP_NODShiLtJ_T0057662.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141265 158203600 + Macrod2 protein_coding processed_transcript MGP_NODShiLtJ_T0057663.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158141400 158203600 + MGP_NODShiLtJ_P0057663 Macrod2 protein_coding protein_coding MGP_NODShiLtJ_T0057667.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 158936875 159103679 + Macrod2 protein_coding processed_transcript MGP_NODShiLtJ_T0057668.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 159586093 160529999 + Macrod2 protein_coding processed_transcript MGP_NODShiLtJ_T0057669.1 MGP_NODShiLtJ_G0026388.1 mouse_genomes_project 2 160311125 160364328 + MGP_NODShiLtJ_P0057669 Macrod2 protein_coding protein_coding MGP_NODShiLtJ_T0058361.1 MGP_NODShiLtJ_G0026574.1 mouse_genomes_project 2 175625167 175629476 + Spag4 protein_coding retained_intron MGP_NODShiLtJ_T0058362.1 MGP_NODShiLtJ_G0026574.1 mouse_genomes_project 2 175625190 175630600 + Spag4 protein_coding retained_intron MGP_NODShiLtJ_T0058363.1 MGP_NODShiLtJ_G0026574.1 mouse_genomes_project 2 175625219 175629199 + Spag4 protein_coding retained_intron MGP_NODShiLtJ_T0058364.1 MGP_NODShiLtJ_G0026574.1 mouse_genomes_project 2 175625236 175629476 + MGP_NODShiLtJ_P0058364 Spag4 protein_coding protein_coding MGP_NODShiLtJ_T0058365.1 MGP_NODShiLtJ_G0026574.1 mouse_genomes_project 2 175625429 175627300 + MGP_NODShiLtJ_P0058365 Spag4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058366.1 MGP_NODShiLtJ_G0026574.1 mouse_genomes_project 2 175625545 175627507 + MGP_NODShiLtJ_P0058366 Spag4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058367.1 MGP_NODShiLtJ_G0026574.1 mouse_genomes_project 2 175625734 175628015 + MGP_NODShiLtJ_P0058367 Spag4 protein_coding protein_coding MGP_NODShiLtJ_T0058368.1 MGP_NODShiLtJ_G0026574.1 mouse_genomes_project 2 175626727 175629353 + Spag4 protein_coding processed_transcript MGP_NODShiLtJ_T0007260.1 MGP_NODShiLtJ_G0005944.1 mouse_genomes_project 2 140366084 140371327 - 4930583P06Rik lincRNA lincRNA MGP_NODShiLtJ_T0007121.1 MGP_NODShiLtJ_G0005832.1 mouse_genomes_project 2 34322837 34324915 + Gm13404 lincRNA lincRNA MGP_NODShiLtJ_T0058305.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175392377 175482731 - Uqcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0058306.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175392377 175482731 - MGP_NODShiLtJ_P0058306 Uqcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058307.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175392379 175482714 - MGP_NODShiLtJ_P0058307 Uqcc1 protein_coding protein_coding MGP_NODShiLtJ_T0058308.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175392379 175482707 - MGP_NODShiLtJ_P0058308 Uqcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058309.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175392404 175482981 - MGP_NODShiLtJ_P0058309 Uqcc1 protein_coding protein_coding MGP_NODShiLtJ_T0058310.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175393420 175482689 - MGP_NODShiLtJ_P0058310 Uqcc1 protein_coding protein_coding MGP_NODShiLtJ_T0058311.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175393657 175397173 - Uqcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0058312.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175393714 175482715 - MGP_NODShiLtJ_P0058312 Uqcc1 protein_coding protein_coding MGP_NODShiLtJ_T0058313.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175393733 175482981 - MGP_NODShiLtJ_P0058313 Uqcc1 protein_coding protein_coding MGP_NODShiLtJ_T0058314.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175393924 175482703 - MGP_NODShiLtJ_P0058314 Uqcc1 protein_coding protein_coding MGP_NODShiLtJ_T0058315.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175396383 175482934 - Uqcc1 protein_coding retained_intron MGP_NODShiLtJ_T0058316.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175396847 175482714 - MGP_NODShiLtJ_P0058316 Uqcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058317.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175403310 175482721 - Uqcc1 protein_coding retained_intron MGP_NODShiLtJ_T0058318.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175416498 175482727 - Uqcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0058319.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175433623 175482731 - MGP_NODShiLtJ_P0058319 Uqcc1 protein_coding protein_coding MGP_NODShiLtJ_T0058320.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175433635 175464171 - Uqcc1 protein_coding retained_intron MGP_NODShiLtJ_T0058321.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175433642 175482947 - Uqcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0058322.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175461535 175482717 - Uqcc1 protein_coding retained_intron MGP_NODShiLtJ_T0058323.1 MGP_NODShiLtJ_G0026567.1 mouse_genomes_project 2 175462930 175482721 - MGP_NODShiLtJ_P0058323 Uqcc1 protein_coding protein_coding MGP_NODShiLtJ_T0101825.1 MGP_NODShiLtJ_G0039993.1 mouse_genomes_project 2 98189272 98190223 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0057250.1 MGP_NODShiLtJ_G0026295.1 mouse_genomes_project 2 145393463 145414022 - MGP_NODShiLtJ_P0057250 Zc3h8 protein_coding protein_coding MGP_NODShiLtJ_T0010291.1 MGP_NODShiLtJ_G0008424.1 mouse_genomes_project 2 30021260 30021331 + Mir6997 miRNA miRNA MGP_NODShiLtJ_T0059329.1 MGP_NODShiLtJ_G0026790.1 mouse_genomes_project 2 196170908 196194272 + MGP_NODShiLtJ_P0059329 Edn3 protein_coding protein_coding MGP_NODShiLtJ_T0059330.1 MGP_NODShiLtJ_G0026790.1 mouse_genomes_project 2 196171088 196192210 + MGP_NODShiLtJ_P0059330 Edn3 protein_coding protein_coding MGP_NODShiLtJ_T0059331.1 MGP_NODShiLtJ_G0026790.1 mouse_genomes_project 2 196171341 196192815 + Edn3 protein_coding retained_intron MGP_NODShiLtJ_T0059332.1 MGP_NODShiLtJ_G0026790.1 mouse_genomes_project 2 196180211 196192770 + Edn3 protein_coding processed_transcript MGP_NODShiLtJ_T0101832.1 MGP_NODShiLtJ_G0040000.1 mouse_genomes_project 2 100814531 100815456 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001072.1 MGP_NODShiLtJ_G0000997.1 mouse_genomes_project 2 145682925 145684868 - TEC TEC MGP_NODShiLtJ_T0054192.1 MGP_NODShiLtJ_G0025514.1 mouse_genomes_project 2 37492541 37493480 + MGP_NODShiLtJ_P0054192 Olfr350 protein_coding protein_coding MGP_NODShiLtJ_T0013446.1 MGP_NODShiLtJ_G0011554.1 mouse_genomes_project 2 65380416 65380725 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007179.1 MGP_NODShiLtJ_G0005880.1 mouse_genomes_project 2 82032985 82035070 - Haglr lincRNA lincRNA MGP_NODShiLtJ_T0007180.1 MGP_NODShiLtJ_G0005880.1 mouse_genomes_project 2 82034996 82047468 - Haglr lincRNA lincRNA MGP_NODShiLtJ_T0052893.1 MGP_NODShiLtJ_G0025293.1 mouse_genomes_project 2 25238228 25246420 - MGP_NODShiLtJ_P0052893 Mamdc4 protein_coding protein_coding MGP_NODShiLtJ_T0052894.1 MGP_NODShiLtJ_G0025293.1 mouse_genomes_project 2 25238250 25246462 - MGP_NODShiLtJ_P0052894 Mamdc4 protein_coding protein_coding MGP_NODShiLtJ_T0052895.1 MGP_NODShiLtJ_G0025293.1 mouse_genomes_project 2 25238423 25245358 - MGP_NODShiLtJ_P0052895 Mamdc4 protein_coding protein_coding MGP_NODShiLtJ_T0052896.1 MGP_NODShiLtJ_G0025293.1 mouse_genomes_project 2 25243561 25244589 - Mamdc4 protein_coding processed_transcript MGP_NODShiLtJ_T0052897.1 MGP_NODShiLtJ_G0025293.1 mouse_genomes_project 2 25243605 25244219 - Mamdc4 protein_coding processed_transcript MGP_NODShiLtJ_T0052898.1 MGP_NODShiLtJ_G0025293.1 mouse_genomes_project 2 25245277 25249935 - Mamdc4 protein_coding processed_transcript MGP_NODShiLtJ_T0007096.1 MGP_NODShiLtJ_G0005814.1 mouse_genomes_project 2 23870980 23871513 + Gm13411 lincRNA lincRNA MGP_NODShiLtJ_T0013361.1 MGP_NODShiLtJ_G0011469.1 mouse_genomes_project 2 31709209 31710004 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007381.1 MGP_NODShiLtJ_G0006047.1 mouse_genomes_project 2 202453575 202454691 + Gm27032 lincRNA lincRNA MGP_NODShiLtJ_T0055593.1 MGP_NODShiLtJ_G0025915.1 mouse_genomes_project 2 99626000 99626944 - MGP_NODShiLtJ_P0055593 Olfr1226 protein_coding protein_coding MGP_NODShiLtJ_T0007064.1 MGP_NODShiLtJ_G0005789.1 mouse_genomes_project 2 869022 900186 + Gm13180 lincRNA lincRNA MGP_NODShiLtJ_T0052608.1 MGP_NODShiLtJ_G0025248.1 mouse_genomes_project 2 23977373 24034885 - MGP_NODShiLtJ_P0052608 Pax8 protein_coding protein_coding MGP_NODShiLtJ_T0052609.1 MGP_NODShiLtJ_G0025248.1 mouse_genomes_project 2 23978207 23979896 - Pax8 protein_coding retained_intron MGP_NODShiLtJ_T0052610.1 MGP_NODShiLtJ_G0025248.1 mouse_genomes_project 2 23978333 24034383 - MGP_NODShiLtJ_P0052610 Pax8 protein_coding protein_coding MGP_NODShiLtJ_T0052611.1 MGP_NODShiLtJ_G0025248.1 mouse_genomes_project 2 23978344 24034850 - MGP_NODShiLtJ_P0052611 Pax8 protein_coding protein_coding MGP_NODShiLtJ_T0052612.1 MGP_NODShiLtJ_G0025248.1 mouse_genomes_project 2 23986318 24034860 - MGP_NODShiLtJ_P0052612 Pax8 protein_coding protein_coding MGP_NODShiLtJ_T0052613.1 MGP_NODShiLtJ_G0025248.1 mouse_genomes_project 2 23998751 24034501 - MGP_NODShiLtJ_P0052613 Pax8 protein_coding protein_coding MGP_NODShiLtJ_T0052614.1 MGP_NODShiLtJ_G0025248.1 mouse_genomes_project 2 24000572 24003475 - Pax8 protein_coding processed_transcript MGP_NODShiLtJ_T0052615.1 MGP_NODShiLtJ_G0025248.1 mouse_genomes_project 2 24031210 24034860 - Pax8 protein_coding retained_intron MGP_NODShiLtJ_T0054309.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 39955515 40104713 - MGP_NODShiLtJ_P0054309 Scai protein_coding protein_coding MGP_NODShiLtJ_T0054310.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 39977411 40104684 - MGP_NODShiLtJ_P0054310 Scai protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054311.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 39977653 40104671 - MGP_NODShiLtJ_P0054311 Scai protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054312.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 39977718 40003187 - MGP_NODShiLtJ_P0054312 Scai protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054313.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 39982603 40104709 - MGP_NODShiLtJ_P0054313 Scai protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054314.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 40005195 40104713 - Scai protein_coding retained_intron MGP_NODShiLtJ_T0054315.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 40007264 40104709 - Scai protein_coding retained_intron MGP_NODShiLtJ_T0054316.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 40010491 40012546 - Scai protein_coding retained_intron MGP_NODShiLtJ_T0054317.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 40010640 40027447 - Scai protein_coding retained_intron MGP_NODShiLtJ_T0054318.1 MGP_NODShiLtJ_G0025548.1 mouse_genomes_project 2 40043832 40104707 - MGP_NODShiLtJ_P0054318 Scai protein_coding protein_coding MGP_NODShiLtJ_T0013643.1 MGP_NODShiLtJ_G0011751.1 mouse_genomes_project 2 146957072 146957904 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055663.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101600568 101642727 + MGP_NODShiLtJ_P0055663 Agbl2 protein_coding protein_coding MGP_NODShiLtJ_T0055664.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101600568 101663406 + MGP_NODShiLtJ_P0055664 Agbl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0055665.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101600569 101636151 + MGP_NODShiLtJ_P0055665 Agbl2 protein_coding protein_coding MGP_NODShiLtJ_T0055666.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101600585 101641714 + MGP_NODShiLtJ_P0055666 Agbl2 protein_coding protein_coding MGP_NODShiLtJ_T0055667.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101601059 101639751 + MGP_NODShiLtJ_P0055667 Agbl2 protein_coding protein_coding MGP_NODShiLtJ_T0055668.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101601086 101658218 + Agbl2 protein_coding processed_transcript MGP_NODShiLtJ_T0055669.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101601394 101641714 + MGP_NODShiLtJ_P0055669 Agbl2 protein_coding protein_coding MGP_NODShiLtJ_T0055670.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101601847 101640995 + MGP_NODShiLtJ_P0055670 Agbl2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0055671.1 MGP_NODShiLtJ_G0025956.1 mouse_genomes_project 2 101601881 101619422 + Agbl2 protein_coding processed_transcript MGP_NODShiLtJ_T0013735.1 MGP_NODShiLtJ_G0011843.1 mouse_genomes_project 2 181541045 181543038 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0052598.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23921150 23950192 + MGP_NODShiLtJ_P0052598 Psd4 protein_coding protein_coding MGP_NODShiLtJ_T0052599.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23921180 23970888 + MGP_NODShiLtJ_P0052599 Psd4 protein_coding protein_coding MGP_NODShiLtJ_T0052600.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23941265 23964663 + MGP_NODShiLtJ_P0052600 Psd4 protein_coding protein_coding MGP_NODShiLtJ_T0052601.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23941268 23950345 + MGP_NODShiLtJ_P0052601 Psd4 protein_coding protein_coding MGP_NODShiLtJ_T0052602.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23941269 23953254 + Psd4 protein_coding processed_transcript MGP_NODShiLtJ_T0052603.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23941286 23950239 + MGP_NODShiLtJ_P0052603 Psd4 protein_coding protein_coding MGP_NODShiLtJ_T0052604.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23942502 23950525 + MGP_NODShiLtJ_P0052604 Psd4 protein_coding protein_coding MGP_NODShiLtJ_T0052605.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23942550 23964134 + MGP_NODShiLtJ_P0052605 Psd4 protein_coding protein_coding MGP_NODShiLtJ_T0052606.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23956969 23959186 + MGP_NODShiLtJ_P0052606 Psd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0052607.1 MGP_NODShiLtJ_G0025247.1 mouse_genomes_project 2 23961562 23962941 + Psd4 protein_coding retained_intron MGP_NODShiLtJ_T0052756.1 MGP_NODShiLtJ_G0025271.1 mouse_genomes_project 2 24903098 24910364 + MGP_NODShiLtJ_P0052756 Tprn protein_coding protein_coding MGP_NODShiLtJ_T0052757.1 MGP_NODShiLtJ_G0025271.1 mouse_genomes_project 2 24904721 24910035 + Tprn protein_coding processed_transcript MGP_NODShiLtJ_T0052758.1 MGP_NODShiLtJ_G0025271.1 mouse_genomes_project 2 24908040 24909650 + Tprn protein_coding processed_transcript MGP_NODShiLtJ_T0052759.1 MGP_NODShiLtJ_G0025271.1 mouse_genomes_project 2 24909414 24909994 + Tprn protein_coding processed_transcript MGP_NODShiLtJ_T0013698.1 MGP_NODShiLtJ_G0011806.1 mouse_genomes_project 2 169906624 169907107 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013638.1 MGP_NODShiLtJ_G0011746.1 mouse_genomes_project 2 145054934 145055144 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010392.1 MGP_NODShiLtJ_G0008525.1 mouse_genomes_project 2 202453510 202453578 + Mir124a-3 miRNA miRNA MGP_NODShiLtJ_T0055557.1 MGP_NODShiLtJ_G0025881.1 mouse_genomes_project 2 98622750 98623662 + MGP_NODShiLtJ_P0055557 Olfr1183 protein_coding protein_coding MGP_NODShiLtJ_T0055560.1 MGP_NODShiLtJ_G0025884.1 mouse_genomes_project 2 98724887 98725274 - MGP_NODShiLtJ_P0055560 Olfr1187-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0055561.1 MGP_NODShiLtJ_G0025884.1 mouse_genomes_project 2 98724890 98725193 - MGP_NODShiLtJ_P0055561 Olfr1187-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0055461.1 MGP_NODShiLtJ_G0025796.1 mouse_genomes_project 2 95464534 95465473 + MGP_NODShiLtJ_P0055461 Olfr1052 protein_coding protein_coding MGP_NODShiLtJ_T0056059.1 MGP_NODShiLtJ_G0026017.1 mouse_genomes_project 2 114966673 114977427 + Commd9 protein_coding processed_transcript MGP_NODShiLtJ_T0056060.1 MGP_NODShiLtJ_G0026017.1 mouse_genomes_project 2 114966679 114982133 + MGP_NODShiLtJ_P0056060 Commd9 protein_coding protein_coding MGP_NODShiLtJ_T0056061.1 MGP_NODShiLtJ_G0026017.1 mouse_genomes_project 2 114966686 114977693 + Commd9 protein_coding retained_intron MGP_NODShiLtJ_T0056062.1 MGP_NODShiLtJ_G0026017.1 mouse_genomes_project 2 114966689 114975886 + Commd9 protein_coding retained_intron MGP_NODShiLtJ_T0003914.1 MGP_NODShiLtJ_G0003488.1 mouse_genomes_project 2 39881091 39882637 - Gm13496 antisense antisense MGP_NODShiLtJ_T0099128.1 MGP_NODShiLtJ_G0037522.1 mouse_genomes_project 2 138219654 138219808 - Gm24409 snRNA snRNA MGP_NODShiLtJ_T0003911.1 MGP_NODShiLtJ_G0003486.1 mouse_genomes_project 2 39557743 39565662 + Nr5a1os antisense antisense MGP_NODShiLtJ_T0052454.1 MGP_NODShiLtJ_G0025215.1 mouse_genomes_project 2 17544242 17549095 + protein_coding processed_transcript MGP_NODShiLtJ_T0052455.1 MGP_NODShiLtJ_G0025215.1 mouse_genomes_project 2 17544262 17549248 + protein_coding processed_transcript MGP_NODShiLtJ_T0052456.1 MGP_NODShiLtJ_G0025215.1 mouse_genomes_project 2 17545163 17607420 + MGP_NODShiLtJ_P0052456 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0052457.1 MGP_NODShiLtJ_G0025215.1 mouse_genomes_project 2 17549294 17589239 + MGP_NODShiLtJ_P0052457 protein_coding protein_coding MGP_NODShiLtJ_T0056355.1 MGP_NODShiLtJ_G0026103.1 mouse_genomes_project 2 127046725 127149405 + MGP_NODShiLtJ_P0056355 Slc12a6 protein_coding protein_coding MGP_NODShiLtJ_T0056357.1 MGP_NODShiLtJ_G0026103.1 mouse_genomes_project 2 127047642 127146307 + MGP_NODShiLtJ_P0056357 Slc12a6 protein_coding protein_coding MGP_NODShiLtJ_T0056358.1 MGP_NODShiLtJ_G0026103.1 mouse_genomes_project 2 127047719 127153434 + MGP_NODShiLtJ_P0056358 Slc12a6 protein_coding protein_coding MGP_NODShiLtJ_T0056359.1 MGP_NODShiLtJ_G0026103.1 mouse_genomes_project 2 127066552 127153434 + MGP_NODShiLtJ_P0056359 Slc12a6 protein_coding protein_coding MGP_NODShiLtJ_T0056360.1 MGP_NODShiLtJ_G0026103.1 mouse_genomes_project 2 127137209 127141916 + Slc12a6 protein_coding processed_transcript MGP_NODShiLtJ_T0056361.1 MGP_NODShiLtJ_G0026103.1 mouse_genomes_project 2 127142803 127144516 + Slc12a6 protein_coding processed_transcript MGP_NODShiLtJ_T0056362.1 MGP_NODShiLtJ_G0026103.1 mouse_genomes_project 2 127144479 127147165 + Slc12a6 protein_coding processed_transcript MGP_NODShiLtJ_T0056363.1 MGP_NODShiLtJ_G0026103.1 mouse_genomes_project 2 127146472 127153441 + Slc12a6 protein_coding retained_intron MGP_NODShiLtJ_T0004052.1 MGP_NODShiLtJ_G0003581.1 mouse_genomes_project 2 159207659 159274319 - Macrod2os1 antisense antisense MGP_NODShiLtJ_T0057708.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162685476 162689877 + Csrp2bp protein_coding processed_transcript MGP_NODShiLtJ_T0057710.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162685489 162724013 + MGP_NODShiLtJ_P0057710 Csrp2bp protein_coding protein_coding MGP_NODShiLtJ_T0057711.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162690286 162710681 + MGP_NODShiLtJ_P0057711 Csrp2bp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0057712.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162691870 162706668 + Csrp2bp protein_coding processed_transcript MGP_NODShiLtJ_T0057713.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162692335 162718046 + Csrp2bp protein_coding processed_transcript MGP_NODShiLtJ_T0057714.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162706385 162710746 + Csrp2bp protein_coding retained_intron MGP_NODShiLtJ_T0057715.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162706399 162710727 + Csrp2bp protein_coding processed_transcript MGP_NODShiLtJ_T0057716.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162719619 162724892 + Csrp2bp protein_coding retained_intron MGP_NODShiLtJ_T0057717.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162719819 162721626 + MGP_NODShiLtJ_P0057717 Csrp2bp protein_coding protein_coding MGP_NODShiLtJ_T0057718.1 MGP_NODShiLtJ_G0026401.1 mouse_genomes_project 2 162721350 162724893 + MGP_NODShiLtJ_P0057718 Csrp2bp protein_coding protein_coding MGP_NODShiLtJ_T0099089.1 MGP_NODShiLtJ_G0037483.1 mouse_genomes_project 2 2396550 2396737 - Gm23118 snRNA snRNA MGP_NODShiLtJ_T0055116.1 MGP_NODShiLtJ_G0025696.1 mouse_genomes_project 2 83347074 83349811 - MGP_NODShiLtJ_P0055116 Ttc30b protein_coding protein_coding MGP_NODShiLtJ_T0004034.1 MGP_NODShiLtJ_G0003569.1 mouse_genomes_project 2 147793775 147805581 + Gm14232 antisense antisense MGP_NODShiLtJ_T0055255.1 MGP_NODShiLtJ_G0025721.1 mouse_genomes_project 2 88260067 88299226 - MGP_NODShiLtJ_P0055255 Frzb protein_coding protein_coding MGP_NODShiLtJ_T0055256.1 MGP_NODShiLtJ_G0025721.1 mouse_genomes_project 2 88261210 88289412 - Frzb protein_coding processed_transcript MGP_NODShiLtJ_T0007304.1 MGP_NODShiLtJ_G0005980.1 mouse_genomes_project 2 170942630 170945673 + Gm14155 lincRNA lincRNA MGP_NODShiLtJ_T0058128.1 MGP_NODShiLtJ_G0026525.1 mouse_genomes_project 2 173326089 173333902 + MGP_NODShiLtJ_P0058128 Bpifa2 protein_coding protein_coding MGP_NODShiLtJ_T0058129.1 MGP_NODShiLtJ_G0026525.1 mouse_genomes_project 2 173326100 173332257 + MGP_NODShiLtJ_P0058129 Bpifa2 protein_coding protein_coding MGP_NODShiLtJ_T0058130.1 MGP_NODShiLtJ_G0026525.1 mouse_genomes_project 2 173331526 173333428 + Bpifa2 protein_coding retained_intron MGP_NODShiLtJ_T0058131.1 MGP_NODShiLtJ_G0026525.1 mouse_genomes_project 2 173332408 173333899 + Bpifa2 protein_coding retained_intron MGP_NODShiLtJ_T0057086.1 MGP_NODShiLtJ_G0026257.1 mouse_genomes_project 2 142879196 142921315 + MGP_NODShiLtJ_P0057086 Slc27a2 protein_coding protein_coding MGP_NODShiLtJ_T0057087.1 MGP_NODShiLtJ_G0026257.1 mouse_genomes_project 2 142880379 142892491 + Slc27a2 protein_coding processed_transcript MGP_NODShiLtJ_T0057088.1 MGP_NODShiLtJ_G0026257.1 mouse_genomes_project 2 142882917 142921007 + MGP_NODShiLtJ_P0057088 Slc27a2 protein_coding protein_coding MGP_NODShiLtJ_T0057089.1 MGP_NODShiLtJ_G0026257.1 mouse_genomes_project 2 142892565 142903209 + Slc27a2 protein_coding processed_transcript MGP_NODShiLtJ_T0054833.1 MGP_NODShiLtJ_G0025637.1 mouse_genomes_project 2 76467619 76494380 - MGP_NODShiLtJ_P0054833 Fastkd1 protein_coding protein_coding MGP_NODShiLtJ_T0054834.1 MGP_NODShiLtJ_G0025637.1 mouse_genomes_project 2 76467741 76494232 - MGP_NODShiLtJ_P0054834 Fastkd1 protein_coding protein_coding MGP_NODShiLtJ_T0054835.1 MGP_NODShiLtJ_G0025637.1 mouse_genomes_project 2 76486869 76496556 - Fastkd1 protein_coding retained_intron MGP_NODShiLtJ_T0054836.1 MGP_NODShiLtJ_G0025637.1 mouse_genomes_project 2 76491537 76496574 - Fastkd1 protein_coding retained_intron MGP_NODShiLtJ_T0003892.1 MGP_NODShiLtJ_G0003470.1 mouse_genomes_project 2 32083789 32089269 - Gm13441 antisense antisense MGP_NODShiLtJ_T0058372.1 MGP_NODShiLtJ_G0026576.1 mouse_genomes_project 2 175632737 175675037 - MGP_NODShiLtJ_P0058372 Gm28036 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058373.1 MGP_NODShiLtJ_G0026576.1 mouse_genomes_project 2 175632737 175659013 - MGP_NODShiLtJ_P0058373 Gm28036 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058389.1 MGP_NODShiLtJ_G0026576.1 mouse_genomes_project 2 175639826 175687067 - MGP_NODShiLtJ_P0058389 Gm28036 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058390.1 MGP_NODShiLtJ_G0026576.1 mouse_genomes_project 2 175639826 175687067 - MGP_NODShiLtJ_P0058390 Gm28036 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058391.1 MGP_NODShiLtJ_G0026576.1 mouse_genomes_project 2 175639826 175687067 - MGP_NODShiLtJ_P0058391 Gm28036 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058392.1 MGP_NODShiLtJ_G0026576.1 mouse_genomes_project 2 175639988 175675062 - MGP_NODShiLtJ_P0058392 Gm28036 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058393.1 MGP_NODShiLtJ_G0026576.1 mouse_genomes_project 2 175639994 175657856 - MGP_NODShiLtJ_P0058393 Gm28036 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0058394.1 MGP_NODShiLtJ_G0026576.1 mouse_genomes_project 2 175640321 175675067 - MGP_NODShiLtJ_P0058394 Gm28036 protein_coding protein_coding MGP_NODShiLtJ_T0055632.1 MGP_NODShiLtJ_G0025944.1 mouse_genomes_project 2 100678436 100681068 + MGP_NODShiLtJ_P0055632 Olfr1261 protein_coding protein_coding MGP_NODShiLtJ_T0054744.1 MGP_NODShiLtJ_G0025617.1 mouse_genomes_project 2 72093858 72306925 + MGP_NODShiLtJ_P0054744 Csrnp3 protein_coding protein_coding MGP_NODShiLtJ_T0054745.1 MGP_NODShiLtJ_G0025617.1 mouse_genomes_project 2 72093933 72301016 + MGP_NODShiLtJ_P0054745 Csrnp3 protein_coding protein_coding MGP_NODShiLtJ_T0054746.1 MGP_NODShiLtJ_G0025617.1 mouse_genomes_project 2 72093936 72131602 + Csrnp3 protein_coding retained_intron MGP_NODShiLtJ_T0054747.1 MGP_NODShiLtJ_G0025617.1 mouse_genomes_project 2 72093946 72298689 + MGP_NODShiLtJ_P0054747 Csrnp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0054748.1 MGP_NODShiLtJ_G0025617.1 mouse_genomes_project 2 72110793 72209389 + Csrnp3 protein_coding retained_intron MGP_NODShiLtJ_T0054749.1 MGP_NODShiLtJ_G0025617.1 mouse_genomes_project 2 72188278 72299356 + MGP_NODShiLtJ_P0054749 Csrnp3 protein_coding protein_coding MGP_NODShiLtJ_T0054750.1 MGP_NODShiLtJ_G0025617.1 mouse_genomes_project 2 72189691 72298894 + MGP_NODShiLtJ_P0054750 Csrnp3 protein_coding protein_coding MGP_NODShiLtJ_T0054751.1 MGP_NODShiLtJ_G0025617.1 mouse_genomes_project 2 72208898 72298463 + MGP_NODShiLtJ_P0054751 Csrnp3 protein_coding protein_coding MGP_NODShiLtJ_T0017746.1 MGP_NODShiLtJ_G0015351.1 mouse_genomes_project 2 176450051 176472679 - 5430405H02Rik processed_transcript antisense MGP_NODShiLtJ_T0017747.1 MGP_NODShiLtJ_G0015351.1 mouse_genomes_project 2 176459454 176472610 - 5430405H02Rik processed_transcript antisense MGP_NODShiLtJ_T0017748.1 MGP_NODShiLtJ_G0015351.1 mouse_genomes_project 2 176459454 176472661 - 5430405H02Rik processed_transcript antisense MGP_NODShiLtJ_T0004066.1 MGP_NODShiLtJ_G0003591.1 mouse_genomes_project 2 165706962 165707960 + 6430503K07Rik antisense antisense MGP_NODShiLtJ_T0013408.1 MGP_NODShiLtJ_G0011516.1 mouse_genomes_project 2 52706103 52706532 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053323.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29319593 29499810 + MGP_NODShiLtJ_P0053323 Med27 protein_coding protein_coding MGP_NODShiLtJ_T0053324.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29319607 29452482 + MGP_NODShiLtJ_P0053324 Med27 protein_coding protein_coding MGP_NODShiLtJ_T0053325.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29351492 29484477 + MGP_NODShiLtJ_P0053325 Med27 protein_coding protein_coding MGP_NODShiLtJ_T0053326.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29351492 29474374 + MGP_NODShiLtJ_P0053326 Med27 protein_coding protein_coding MGP_NODShiLtJ_T0053327.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29352166 29474271 + MGP_NODShiLtJ_P0053327 Med27 protein_coding protein_coding MGP_NODShiLtJ_T0053328.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29352185 29499572 + MGP_NODShiLtJ_P0053328 Med27 protein_coding protein_coding MGP_NODShiLtJ_T0053329.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29352257 29451670 + MGP_NODShiLtJ_P0053329 Med27 protein_coding protein_coding MGP_NODShiLtJ_T0053330.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29364984 29497868 + Med27 protein_coding processed_transcript MGP_NODShiLtJ_T0053331.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29470566 29474596 + Med27 protein_coding retained_intron MGP_NODShiLtJ_T0053332.1 MGP_NODShiLtJ_G0025377.1 mouse_genomes_project 2 29478937 29499698 + Med27 protein_coding processed_transcript MGP_NODShiLtJ_T0003997.1 MGP_NODShiLtJ_G0003542.1 mouse_genomes_project 2 119087165 119088265 + Gm13954 antisense antisense MGP_NODShiLtJ_T0010241.1 MGP_NODShiLtJ_G0008374.1 mouse_genomes_project 2 8307330 8307434 + Gm23578 miRNA miRNA MGP_NODShiLtJ_T0053822.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32668659 32706508 - MGP_NODShiLtJ_P0053822 Slc25a25 protein_coding protein_coding MGP_NODShiLtJ_T0053823.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32668659 32686187 - MGP_NODShiLtJ_P0053823 Slc25a25 protein_coding protein_coding MGP_NODShiLtJ_T0053824.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32668662 32706531 - MGP_NODShiLtJ_P0053824 Slc25a25 protein_coding protein_coding MGP_NODShiLtJ_T0053825.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32669142 32685820 - MGP_NODShiLtJ_P0053825 Slc25a25 protein_coding protein_coding MGP_NODShiLtJ_T0053826.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32669232 32678178 - MGP_NODShiLtJ_P0053826 Slc25a25 protein_coding protein_coding MGP_NODShiLtJ_T0053827.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32670381 32670744 - Slc25a25 protein_coding retained_intron MGP_NODShiLtJ_T0053828.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32671264 32674623 - Slc25a25 protein_coding retained_intron MGP_NODShiLtJ_T0053829.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32671344 32672003 - Slc25a25 protein_coding retained_intron MGP_NODShiLtJ_T0053830.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32671590 32686173 - MGP_NODShiLtJ_P0053830 Slc25a25 protein_coding protein_coding MGP_NODShiLtJ_T0053831.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32673220 32676153 - MGP_NODShiLtJ_P0053831 Slc25a25 protein_coding protein_coding MGP_NODShiLtJ_T0053832.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32673302 32686172 - MGP_NODShiLtJ_P0053832 Slc25a25 protein_coding protein_coding MGP_NODShiLtJ_T0053833.1 MGP_NODShiLtJ_G0025445.1 mouse_genomes_project 2 32682416 32686237 - Slc25a25 protein_coding retained_intron MGP_NODShiLtJ_T0010383.1 MGP_NODShiLtJ_G0008516.1 mouse_genomes_project 2 194104940 194105018 - Gm22773 miRNA miRNA MGP_NODShiLtJ_T0057988.1 MGP_NODShiLtJ_G0026480.1 mouse_genomes_project 2 171606373 171613344 - MGP_NODShiLtJ_P0057988 Defb23 protein_coding protein_coding MGP_NODShiLtJ_T0017713.1 MGP_NODShiLtJ_G0015334.1 mouse_genomes_project 2 144637299 144877777 - Gm14005 processed_transcript processed_transcript MGP_NODShiLtJ_T0017714.1 MGP_NODShiLtJ_G0015334.1 mouse_genomes_project 2 144743380 144877960 - Gm14005 processed_transcript processed_transcript MGP_NODShiLtJ_T0017715.1 MGP_NODShiLtJ_G0015334.1 mouse_genomes_project 2 144760316 144877986 - Gm14005 processed_transcript processed_transcript MGP_NODShiLtJ_T0017716.1 MGP_NODShiLtJ_G0015334.1 mouse_genomes_project 2 144760492 144877807 - Gm14005 processed_transcript processed_transcript MGP_NODShiLtJ_T0017717.1 MGP_NODShiLtJ_G0015334.1 mouse_genomes_project 2 144790125 144877877 - Gm14005 processed_transcript processed_transcript MGP_NODShiLtJ_T0017718.1 MGP_NODShiLtJ_G0015334.1 mouse_genomes_project 2 144816679 144877823 - Gm14005 processed_transcript processed_transcript MGP_NODShiLtJ_T0017719.1 MGP_NODShiLtJ_G0015334.1 mouse_genomes_project 2 144816680 144877530 - Gm14005 processed_transcript processed_transcript MGP_NODShiLtJ_T0004000.1 MGP_NODShiLtJ_G0003544.1 mouse_genomes_project 2 128278953 128335820 - Gm13963 antisense antisense MGP_NODShiLtJ_T0010313.1 MGP_NODShiLtJ_G0008446.1 mouse_genomes_project 2 67228008 67228092 - Gm22403 miRNA miRNA MGP_NODShiLtJ_T0013724.1 MGP_NODShiLtJ_G0011832.1 mouse_genomes_project 2 176506979 176507216 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013601.1 MGP_NODShiLtJ_G0011709.1 mouse_genomes_project 2 124617262 124619697 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013546.1 MGP_NODShiLtJ_G0011654.1 mouse_genomes_project 2 102436163 102436468 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0057263.1 MGP_NODShiLtJ_G0026301.1 mouse_genomes_project 2 145613905 145618336 + MGP_NODShiLtJ_P0057263 Chchd5 protein_coding protein_coding MGP_NODShiLtJ_T0057264.1 MGP_NODShiLtJ_G0026301.1 mouse_genomes_project 2 145614009 145618215 + Chchd5 protein_coding processed_transcript MGP_NODShiLtJ_T0057265.1 MGP_NODShiLtJ_G0026301.1 mouse_genomes_project 2 145614055 145617682 + Chchd5 protein_coding retained_intron MGP_NODShiLtJ_T0099103.1 MGP_NODShiLtJ_G0037497.1 mouse_genomes_project 2 37966854 37966961 + Gm22306 snRNA snRNA MGP_NODShiLtJ_T0058304.1 MGP_NODShiLtJ_G0026566.1 mouse_genomes_project 2 175370433 175377853 - MGP_NODShiLtJ_P0058304 Fam83c protein_coding protein_coding MGP_NODShiLtJ_T0017645.1 MGP_NODShiLtJ_G0015300.1 mouse_genomes_project 2 83087231 83092494 + E030042O20Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0100416.1 MGP_NODShiLtJ_G0038810.1 mouse_genomes_project 2 178128574 178128687 - Gm26003 snoRNA snoRNA MGP_NODShiLtJ_T0058009.1 MGP_NODShiLtJ_G0026494.1 mouse_genomes_project 2 171868024 171868941 + MGP_NODShiLtJ_P0058009 Mcts2 protein_coding protein_coding MGP_NODShiLtJ_T0011415.1 MGP_NODShiLtJ_G0009548.1 mouse_genomes_project 2 195647083 195647147 + Gm27899 misc_RNA misc_RNA MGP_NODShiLtJ_T0055598.1 MGP_NODShiLtJ_G0025920.1 mouse_genomes_project 2 99765244 99766180 - MGP_NODShiLtJ_P0055598 Olfr1232 protein_coding protein_coding MGP_NODShiLtJ_T0101822.1 MGP_NODShiLtJ_G0039990.1 mouse_genomes_project 2 97826512 97827454 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0057408.1 MGP_NODShiLtJ_G0026335.1 mouse_genomes_project 2 147657283 147660740 - MGP_NODShiLtJ_P0057408 Gfra4 protein_coding protein_coding MGP_NODShiLtJ_T0057409.1 MGP_NODShiLtJ_G0026335.1 mouse_genomes_project 2 147657290 147659109 - Gfra4 protein_coding retained_intron MGP_NODShiLtJ_T0057410.1 MGP_NODShiLtJ_G0026335.1 mouse_genomes_project 2 147657291 147659163 - Gfra4 protein_coding retained_intron MGP_NODShiLtJ_T0057411.1 MGP_NODShiLtJ_G0026335.1 mouse_genomes_project 2 147657827 147660334 - MGP_NODShiLtJ_P0057411 Gfra4 protein_coding protein_coding MGP_NODShiLtJ_T0057412.1 MGP_NODShiLtJ_G0026335.1 mouse_genomes_project 2 147657859 147660334 - MGP_NODShiLtJ_P0057412 Gfra4 protein_coding protein_coding MGP_NODShiLtJ_T0057413.1 MGP_NODShiLtJ_G0026335.1 mouse_genomes_project 2 147657859 147660740 - MGP_NODShiLtJ_P0057413 Gfra4 protein_coding protein_coding MGP_NODShiLtJ_T0057414.1 MGP_NODShiLtJ_G0026335.1 mouse_genomes_project 2 147658883 147660740 - MGP_NODShiLtJ_P0057414 Gfra4 protein_coding protein_coding MGP_NODShiLtJ_T0057415.1 MGP_NODShiLtJ_G0026335.1 mouse_genomes_project 2 147658883 147660334 - MGP_NODShiLtJ_P0057415 Gfra4 protein_coding protein_coding MGP_NODShiLtJ_T0101805.1 MGP_NODShiLtJ_G0039973.1 mouse_genomes_project 2 94811418 94812106 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017670.1 MGP_NODShiLtJ_G0015316.1 mouse_genomes_project 2 105560664 105566193 + 2810002D19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0010317.1 MGP_NODShiLtJ_G0008450.1 mouse_genomes_project 2 80066902 80067027 - Gm25960 miRNA miRNA MGP_NODShiLtJ_T0058011.1 MGP_NODShiLtJ_G0026495.1 mouse_genomes_project 2 171919739 171920899 + MGP_NODShiLtJ_P0058011 Id1 protein_coding protein_coding MGP_NODShiLtJ_T0058012.1 MGP_NODShiLtJ_G0026495.1 mouse_genomes_project 2 171919739 171920899 + MGP_NODShiLtJ_P0058012 Id1 protein_coding protein_coding MGP_NODShiLtJ_T0013763.1 MGP_NODShiLtJ_G0011871.1 mouse_genomes_project 2 201478864 201479273 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0058826.1 MGP_NODShiLtJ_G0026671.1 mouse_genomes_project 2 184759428 184792533 + MGP_NODShiLtJ_P0058826 Gm20458 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0056759.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136393551 136409614 - MGP_NODShiLtJ_P0056759 Cdan1 protein_coding protein_coding MGP_NODShiLtJ_T0056760.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136393907 136409615 - MGP_NODShiLtJ_P0056760 Cdan1 protein_coding protein_coding MGP_NODShiLtJ_T0056761.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136395571 136523343 - Cdan1 protein_coding processed_transcript MGP_NODShiLtJ_T0056762.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136396006 136397898 - Cdan1 protein_coding processed_transcript MGP_NODShiLtJ_T0056763.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136400497 136402552 - Cdan1 protein_coding retained_intron MGP_NODShiLtJ_T0056764.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136403707 136406074 - Cdan1 protein_coding retained_intron MGP_NODShiLtJ_T0056765.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136406014 136406735 - Cdan1 protein_coding retained_intron MGP_NODShiLtJ_T0056766.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136406724 136409603 - Cdan1 protein_coding processed_transcript MGP_NODShiLtJ_T0056767.1 MGP_NODShiLtJ_G0026189.1 mouse_genomes_project 2 136408038 136409587 - Cdan1 protein_coding processed_transcript MGP_NODShiLtJ_T0013651.1 MGP_NODShiLtJ_G0011759.1 mouse_genomes_project 2 148551342 148552636 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010292.1 MGP_NODShiLtJ_G0008425.1 mouse_genomes_project 2 30417682 30417778 + miRNA miRNA MGP_NODShiLtJ_T0053152.1 MGP_NODShiLtJ_G0025343.1 mouse_genomes_project 2 26742832 26767555 + MGP_NODShiLtJ_P0053152 Adamts13 protein_coding protein_coding MGP_NODShiLtJ_T0053153.1 MGP_NODShiLtJ_G0025343.1 mouse_genomes_project 2 26742909 26772797 + MGP_NODShiLtJ_P0053153 Adamts13 protein_coding protein_coding MGP_NODShiLtJ_T0053154.1 MGP_NODShiLtJ_G0025343.1 mouse_genomes_project 2 26769803 26772614 + Adamts13 protein_coding processed_transcript MGP_NODShiLtJ_T0013552.1 MGP_NODShiLtJ_G0011660.1 mouse_genomes_project 2 103914600 103915023 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053111.1 MGP_NODShiLtJ_G0025336.1 mouse_genomes_project 2 26669615 26675031 - MGP_NODShiLtJ_P0053111 Med22 protein_coding protein_coding MGP_NODShiLtJ_T0053112.1 MGP_NODShiLtJ_G0025336.1 mouse_genomes_project 2 26669941 26674923 - MGP_NODShiLtJ_P0053112 Med22 protein_coding protein_coding MGP_NODShiLtJ_T0053113.1 MGP_NODShiLtJ_G0025336.1 mouse_genomes_project 2 26672462 26674932 - MGP_NODShiLtJ_P0053113 Med22 protein_coding protein_coding MGP_NODShiLtJ_T0053114.1 MGP_NODShiLtJ_G0025337.1 mouse_genomes_project 2 26675117 26677672 + MGP_NODShiLtJ_P0053114 Rpl7a protein_coding protein_coding MGP_NODShiLtJ_T0053115.1 MGP_NODShiLtJ_G0025337.1 mouse_genomes_project 2 26675170 26677411 + Rpl7a protein_coding processed_transcript MGP_NODShiLtJ_T0053116.1 MGP_NODShiLtJ_G0025337.1 mouse_genomes_project 2 26675174 26677672 + Rpl7a protein_coding processed_transcript MGP_NODShiLtJ_T0053117.1 MGP_NODShiLtJ_G0025337.1 mouse_genomes_project 2 26675359 26677672 + Rpl7a protein_coding processed_transcript MGP_NODShiLtJ_T0053118.1 MGP_NODShiLtJ_G0025337.1 mouse_genomes_project 2 26676545 26677672 + Rpl7a protein_coding processed_transcript MGP_NODShiLtJ_T0053119.1 MGP_NODShiLtJ_G0025337.1 mouse_genomes_project 2 26676972 26677672 + Rpl7a protein_coding processed_transcript MGP_NODShiLtJ_T0053120.1 MGP_NODShiLtJ_G0025337.1 mouse_genomes_project 2 26677024 26677566 + Rpl7a protein_coding processed_transcript MGP_NODShiLtJ_T0053254.1 MGP_NODShiLtJ_G0025365.1 mouse_genomes_project 2 28464690 28496525 - MGP_NODShiLtJ_P0053254 Gtf3c5 protein_coding protein_coding MGP_NODShiLtJ_T0053255.1 MGP_NODShiLtJ_G0025365.1 mouse_genomes_project 2 28464690 28496435 - MGP_NODShiLtJ_P0053255 Gtf3c5 protein_coding protein_coding MGP_NODShiLtJ_T0053256.1 MGP_NODShiLtJ_G0025365.1 mouse_genomes_project 2 28467135 28474825 - Gtf3c5 protein_coding retained_intron MGP_NODShiLtJ_T0053257.1 MGP_NODShiLtJ_G0025365.1 mouse_genomes_project 2 28475883 28482245 - Gtf3c5 protein_coding retained_intron MGP_NODShiLtJ_T0053258.1 MGP_NODShiLtJ_G0025365.1 mouse_genomes_project 2 28492319 28496513 - Gtf3c5 protein_coding retained_intron MGP_NODShiLtJ_T0053259.1 MGP_NODShiLtJ_G0025365.1 mouse_genomes_project 2 28492852 28496234 - MGP_NODShiLtJ_P0053259 Gtf3c5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053260.1 MGP_NODShiLtJ_G0025365.1 mouse_genomes_project 2 28496250 28496997 - Gtf3c5 protein_coding processed_transcript MGP_NODShiLtJ_T0052407.1 MGP_NODShiLtJ_G0025209.1 mouse_genomes_project 2 16746923 16759483 - MGP_NODShiLtJ_P0052407 A930004D18Rik protein_coding protein_coding MGP_NODShiLtJ_T0052408.1 MGP_NODShiLtJ_G0025209.1 mouse_genomes_project 2 16749656 16750491 - A930004D18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0052409.1 MGP_NODShiLtJ_G0025209.1 mouse_genomes_project 2 16749704 16750602 - A930004D18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0003858.1 MGP_NODShiLtJ_G0003446.1 mouse_genomes_project 2 20028596 20029540 + Gm13375 antisense antisense MGP_NODShiLtJ_T0098001.1 MGP_NODShiLtJ_G0036413.1 mouse_genomes_project 2 20248943 20249074 + Gm25368 rRNA rRNA MGP_NODShiLtJ_T0003961.1 MGP_NODShiLtJ_G0003521.1 mouse_genomes_project 2 80777523 80799064 + Chn1os3 antisense antisense MGP_NODShiLtJ_T0003962.1 MGP_NODShiLtJ_G0003521.1 mouse_genomes_project 2 80777821 80780198 + Chn1os3 antisense antisense MGP_NODShiLtJ_T0054573.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65111381 65147459 - MGP_NODShiLtJ_P0054573 Wdsub1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0054574.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65111384 65147389 - MGP_NODShiLtJ_P0054574 Wdsub1 protein_coding protein_coding MGP_NODShiLtJ_T0054575.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65114289 65147352 - MGP_NODShiLtJ_P0054575 Wdsub1 protein_coding protein_coding MGP_NODShiLtJ_T0054576.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65120908 65122311 - Wdsub1 protein_coding processed_transcript MGP_NODShiLtJ_T0054577.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65120917 65121265 - Wdsub1 protein_coding processed_transcript MGP_NODShiLtJ_T0054578.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65121145 65141629 - MGP_NODShiLtJ_P0054578 Wdsub1 protein_coding protein_coding MGP_NODShiLtJ_T0054579.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65121272 65123146 - Wdsub1 protein_coding processed_transcript MGP_NODShiLtJ_T0054580.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65122257 65147362 - Wdsub1 protein_coding processed_transcript MGP_NODShiLtJ_T0054581.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65135047 65142959 - MGP_NODShiLtJ_P0054581 Wdsub1 protein_coding protein_coding MGP_NODShiLtJ_T0054582.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65137781 65143141 - Wdsub1 protein_coding processed_transcript MGP_NODShiLtJ_T0054583.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65141453 65147391 - MGP_NODShiLtJ_P0054583 Wdsub1 protein_coding protein_coding MGP_NODShiLtJ_T0054584.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65141454 65147379 - MGP_NODShiLtJ_P0054584 Wdsub1 protein_coding protein_coding MGP_NODShiLtJ_T0054585.1 MGP_NODShiLtJ_G0025593.1 mouse_genomes_project 2 65143126 65147396 - Wdsub1 protein_coding processed_transcript MGP_NODShiLtJ_T0010301.1 MGP_NODShiLtJ_G0008434.1 mouse_genomes_project 2 32958119 32958256 - Mir8093 miRNA miRNA MGP_NODShiLtJ_T0003829.1 MGP_NODShiLtJ_G0003423.1 mouse_genomes_project 2 1155310 1164388 - 1700080N15Rik antisense antisense MGP_NODShiLtJ_T0003830.1 MGP_NODShiLtJ_G0003423.1 mouse_genomes_project 2 1155312 1164388 - 1700080N15Rik antisense antisense MGP_NODShiLtJ_T0003831.1 MGP_NODShiLtJ_G0003423.1 mouse_genomes_project 2 1158720 1164386 - 1700080N15Rik antisense antisense MGP_NODShiLtJ_T0007154.1 MGP_NODShiLtJ_G0005859.1 mouse_genomes_project 2 66323964 66334702 - Gm13582 lincRNA lincRNA MGP_NODShiLtJ_T0013649.1 MGP_NODShiLtJ_G0011757.1 mouse_genomes_project 2 148080662 148080987 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055086.1 MGP_NODShiLtJ_G0025686.1 mouse_genomes_project 2 81980812 81983294 + MGP_NODShiLtJ_P0055086 Hoxd9 protein_coding protein_coding MGP_NODShiLtJ_T0053428.1 MGP_NODShiLtJ_G0025390.1 mouse_genomes_project 2 30112552 30115994 + MGP_NODShiLtJ_P0053428 Pkn3 protein_coding protein_coding MGP_NODShiLtJ_T0053429.1 MGP_NODShiLtJ_G0025390.1 mouse_genomes_project 2 30112611 30125934 + Pkn3 protein_coding retained_intron MGP_NODShiLtJ_T0053430.1 MGP_NODShiLtJ_G0025390.1 mouse_genomes_project 2 30113081 30114851 + MGP_NODShiLtJ_P0053430 Pkn3 protein_coding protein_coding MGP_NODShiLtJ_T0053431.1 MGP_NODShiLtJ_G0025390.1 mouse_genomes_project 2 30113452 30125940 + MGP_NODShiLtJ_P0053431 Pkn3 protein_coding protein_coding MGP_NODShiLtJ_T0053432.1 MGP_NODShiLtJ_G0025390.1 mouse_genomes_project 2 30113566 30120528 + Pkn3 protein_coding retained_intron MGP_NODShiLtJ_T0053433.1 MGP_NODShiLtJ_G0025390.1 mouse_genomes_project 2 30113622 30125943 + Pkn3 protein_coding retained_intron MGP_NODShiLtJ_T0053434.1 MGP_NODShiLtJ_G0025390.1 mouse_genomes_project 2 30115719 30118090 + Pkn3 protein_coding retained_intron MGP_NODShiLtJ_T0053435.1 MGP_NODShiLtJ_G0025390.1 mouse_genomes_project 2 30119628 30122017 + Pkn3 protein_coding retained_intron MGP_NODShiLtJ_T0055688.1 MGP_NODShiLtJ_G0025960.1 mouse_genomes_project 2 101739358 101745226 + MGP_NODShiLtJ_P0055688 Kbtbd4 protein_coding protein_coding MGP_NODShiLtJ_T0055689.1 MGP_NODShiLtJ_G0025960.1 mouse_genomes_project 2 101739361 101745226 + MGP_NODShiLtJ_P0055689 Kbtbd4 protein_coding protein_coding MGP_NODShiLtJ_T0055690.1 MGP_NODShiLtJ_G0025960.1 mouse_genomes_project 2 101739387 101740239 + Kbtbd4 protein_coding processed_transcript MGP_NODShiLtJ_T0055691.1 MGP_NODShiLtJ_G0025960.1 mouse_genomes_project 2 101739696 101740675 + Kbtbd4 protein_coding processed_transcript MGP_NODShiLtJ_T0055692.1 MGP_NODShiLtJ_G0025960.1 mouse_genomes_project 2 101743828 101746291 + Kbtbd4 protein_coding processed_transcript MGP_NODShiLtJ_T0057204.1 MGP_NODShiLtJ_G0026283.1 mouse_genomes_project 2 144123610 144150823 - MGP_NODShiLtJ_P0057204 Mall protein_coding protein_coding MGP_NODShiLtJ_T0097796.1 MGP_NODShiLtJ_G0036208.1 mouse_genomes_project 2 29734705 29735036 - pseudogene pseudogene MGP_NODShiLtJ_T0054190.1 MGP_NODShiLtJ_G0025512.1 mouse_genomes_project 2 37401734 37402673 + MGP_NODShiLtJ_P0054190 Olfr50 protein_coding protein_coding MGP_NODShiLtJ_T0013631.1 MGP_NODShiLtJ_G0011739.1 mouse_genomes_project 2 141295028 141295128 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0053289.1 MGP_NODShiLtJ_G0025371.1 mouse_genomes_project 2 28776237 28783343 + Ddx31 protein_coding processed_transcript MGP_NODShiLtJ_T0053290.1 MGP_NODShiLtJ_G0025371.1 mouse_genomes_project 2 28776290 28841263 + MGP_NODShiLtJ_P0053290 Ddx31 protein_coding protein_coding MGP_NODShiLtJ_T0053291.1 MGP_NODShiLtJ_G0025371.1 mouse_genomes_project 2 28780733 28792059 + Ddx31 protein_coding processed_transcript MGP_NODShiLtJ_T0053292.1 MGP_NODShiLtJ_G0025371.1 mouse_genomes_project 2 28792968 28795905 + Ddx31 protein_coding processed_transcript MGP_NODShiLtJ_T0058643.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178592986 178664675 + MGP_NODShiLtJ_P0058643 Dhx35 protein_coding protein_coding MGP_NODShiLtJ_T0058644.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178592986 178664675 + MGP_NODShiLtJ_P0058644 Dhx35 protein_coding protein_coding MGP_NODShiLtJ_T0058645.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178593041 178664675 + Dhx35 protein_coding processed_transcript MGP_NODShiLtJ_T0058646.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178593044 178650032 + Dhx35 protein_coding retained_intron MGP_NODShiLtJ_T0058647.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178593064 178632696 + MGP_NODShiLtJ_P0058647 Dhx35 protein_coding protein_coding MGP_NODShiLtJ_T0058648.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178593070 178621516 + Dhx35 protein_coding processed_transcript MGP_NODShiLtJ_T0058649.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178594102 178599702 + Dhx35 protein_coding processed_transcript MGP_NODShiLtJ_T0058650.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178630527 178638058 + Dhx35 protein_coding processed_transcript MGP_NODShiLtJ_T0058651.1 MGP_NODShiLtJ_G0026621.1 mouse_genomes_project 2 178653706 178663829 + Dhx35 protein_coding processed_transcript MGP_NODShiLtJ_T0007276.1 MGP_NODShiLtJ_G0005957.1 mouse_genomes_project 2 150291780 150294447 + Gm14100 lincRNA lincRNA MGP_NODShiLtJ_T0010274.1 MGP_NODShiLtJ_G0008407.1 mouse_genomes_project 2 16781912 16781970 + Mir7655 miRNA miRNA MGP_NODShiLtJ_T0001048.1 MGP_NODShiLtJ_G0000974.1 mouse_genomes_project 2 38893964 38896831 - TEC TEC MGP_NODShiLtJ_T0003936.1 MGP_NODShiLtJ_G0003505.1 mouse_genomes_project 2 72765645 72903993 + Gm13629 antisense antisense MGP_NODShiLtJ_T0003937.1 MGP_NODShiLtJ_G0003505.1 mouse_genomes_project 2 72765661 72860128 + Gm13629 antisense antisense MGP_NODShiLtJ_T0101795.1 MGP_NODShiLtJ_G0039963.1 mouse_genomes_project 2 39856287 39860706 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059339.1 MGP_NODShiLtJ_G0026792.1 mouse_genomes_project 2 199705714 199796099 - MGP_NODShiLtJ_P0059339 protein_coding protein_coding MGP_NODShiLtJ_T0059340.1 MGP_NODShiLtJ_G0026792.1 mouse_genomes_project 2 199707336 199759639 - protein_coding processed_transcript MGP_NODShiLtJ_T0059341.1 MGP_NODShiLtJ_G0026792.1 mouse_genomes_project 2 199754224 199759979 - protein_coding retained_intron MGP_NODShiLtJ_T0004077.1 MGP_NODShiLtJ_G0003601.1 mouse_genomes_project 2 172919390 172920988 - Dnmt3bos antisense antisense MGP_NODShiLtJ_T0013313.1 MGP_NODShiLtJ_G0011421.1 mouse_genomes_project 2 12937668 12938047 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055272.1 MGP_NODShiLtJ_G0025725.1 mouse_genomes_project 2 88556326 88559408 + MGP_NODShiLtJ_P0055272 protein_coding protein_coding MGP_NODShiLtJ_T0101836.1 MGP_NODShiLtJ_G0040004.1 mouse_genomes_project 2 120641621 120641814 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0055702.1 MGP_NODShiLtJ_G0025962.1 mouse_genomes_project 2 101882485 101893422 + MGP_NODShiLtJ_P0055702 Rapsn protein_coding protein_coding MGP_NODShiLtJ_T0055703.1 MGP_NODShiLtJ_G0025962.1 mouse_genomes_project 2 101882492 101893419 + MGP_NODShiLtJ_P0055703 Rapsn protein_coding protein_coding MGP_NODShiLtJ_T0055704.1 MGP_NODShiLtJ_G0025962.1 mouse_genomes_project 2 101882506 101893422 + MGP_NODShiLtJ_P0055704 Rapsn protein_coding protein_coding MGP_NODShiLtJ_T0055705.1 MGP_NODShiLtJ_G0025962.1 mouse_genomes_project 2 101890481 101893173 + Rapsn protein_coding retained_intron MGP_NODShiLtJ_T0056226.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119042248 119073732 + MGP_NODShiLtJ_P0056226 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056227.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119042248 119073732 + MGP_NODShiLtJ_P0056227 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056228.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119042268 119072749 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056229.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119042283 119059929 + MGP_NODShiLtJ_P0056229 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056230.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119045271 119073610 + MGP_NODShiLtJ_P0056230 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056231.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119047355 119049322 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056232.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119048554 119049475 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056233.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119048636 119049268 + Pax6 protein_coding retained_intron MGP_NODShiLtJ_T0056234.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119048636 119073610 + MGP_NODShiLtJ_P0056234 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056235.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119048878 119073712 + MGP_NODShiLtJ_P0056235 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056236.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119048958 119073729 + MGP_NODShiLtJ_P0056236 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056237.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119048972 119073439 + MGP_NODShiLtJ_P0056237 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056238.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119049630 119073439 + MGP_NODShiLtJ_P0056238 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056239.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119049631 119073729 + MGP_NODShiLtJ_P0056239 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056240.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119053104 119061854 + MGP_NODShiLtJ_P0056240 Pax6 protein_coding protein_coding MGP_NODShiLtJ_T0056241.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119054664 119068413 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056242.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119056547 119061041 + Pax6 protein_coding retained_intron MGP_NODShiLtJ_T0056243.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119057298 119068424 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056244.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119057343 119068456 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056245.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119057370 119072640 + Pax6 protein_coding retained_intron MGP_NODShiLtJ_T0056246.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119057372 119067915 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056247.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119057382 119068434 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056248.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119057472 119067886 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056249.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119059812 119061002 + Pax6 protein_coding retained_intron MGP_NODShiLtJ_T0056250.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119061380 119073732 + Pax6 protein_coding processed_transcript MGP_NODShiLtJ_T0056251.1 MGP_NODShiLtJ_G0026053.1 mouse_genomes_project 2 119068673 119069316 + Pax6 protein_coding retained_intron MGP_NODShiLtJ_T0055611.1 MGP_NODShiLtJ_G0025930.1 mouse_genomes_project 2 100129271 100130216 - MGP_NODShiLtJ_P0055611 Olfr1246 protein_coding protein_coding MGP_NODShiLtJ_T0010300.1 MGP_NODShiLtJ_G0008433.1 mouse_genomes_project 2 32945204 32945269 + miRNA miRNA MGP_NODShiLtJ_T0013650.1 MGP_NODShiLtJ_G0011758.1 mouse_genomes_project 2 148129502 148130019 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099107.1 MGP_NODShiLtJ_G0037501.1 mouse_genomes_project 2 51793977 51794097 - Gm25338 snRNA snRNA MGP_NODShiLtJ_T0003893.1 MGP_NODShiLtJ_G0003471.1 mouse_genomes_project 2 32164563 32166732 - antisense antisense MGP_NODShiLtJ_T0053657.1 MGP_NODShiLtJ_G0025422.1 mouse_genomes_project 2 31447915 31599650 + MGP_NODShiLtJ_P0053657 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0053658.1 MGP_NODShiLtJ_G0025422.1 mouse_genomes_project 2 31447915 31599648 + MGP_NODShiLtJ_P0053658 protein_coding protein_coding MGP_NODShiLtJ_T0053659.1 MGP_NODShiLtJ_G0025422.1 mouse_genomes_project 2 31536395 31543249 + MGP_NODShiLtJ_P0053659 protein_coding protein_coding MGP_NODShiLtJ_T0053660.1 MGP_NODShiLtJ_G0025422.1 mouse_genomes_project 2 31575321 31599633 + protein_coding retained_intron MGP_NODShiLtJ_T0053661.1 MGP_NODShiLtJ_G0025422.1 mouse_genomes_project 2 31585407 31599647 + protein_coding processed_transcript MGP_NODShiLtJ_T0053662.1 MGP_NODShiLtJ_G0025422.1 mouse_genomes_project 2 31593144 31596947 + protein_coding retained_intron MGP_NODShiLtJ_T0057723.1 MGP_NODShiLtJ_G0026404.1 mouse_genomes_project 2 162858646 162875319 + MGP_NODShiLtJ_P0057723 Polr3f protein_coding protein_coding MGP_NODShiLtJ_T0057724.1 MGP_NODShiLtJ_G0026404.1 mouse_genomes_project 2 162858670 162861624 + Polr3f protein_coding processed_transcript MGP_NODShiLtJ_T0057725.1 MGP_NODShiLtJ_G0026404.1 mouse_genomes_project 2 162858676 162868497 + MGP_NODShiLtJ_P0057725 Polr3f protein_coding protein_coding MGP_NODShiLtJ_T0057726.1 MGP_NODShiLtJ_G0026404.1 mouse_genomes_project 2 162858708 162868014 + Polr3f protein_coding processed_transcript MGP_NODShiLtJ_T0057727.1 MGP_NODShiLtJ_G0026404.1 mouse_genomes_project 2 162864110 162872118 + Polr3f protein_coding processed_transcript MGP_NODShiLtJ_T0057728.1 MGP_NODShiLtJ_G0026404.1 mouse_genomes_project 2 162869264 162869952 + Polr3f protein_coding processed_transcript MGP_NODShiLtJ_T0057729.1 MGP_NODShiLtJ_G0026404.1 mouse_genomes_project 2 162869499 162872218 + Polr3f protein_coding processed_transcript MGP_NODShiLtJ_T0055119.1 MGP_NODShiLtJ_G0025699.1 mouse_genomes_project 2 83404117 83421052 - MGP_NODShiLtJ_P0055119 Pde11a protein_coding protein_coding MGP_NODShiLtJ_T0055120.1 MGP_NODShiLtJ_G0025699.1 mouse_genomes_project 2 83404875 83769077 - MGP_NODShiLtJ_P0055120 Pde11a protein_coding protein_coding MGP_NODShiLtJ_T0055121.1 MGP_NODShiLtJ_G0025699.1 mouse_genomes_project 2 83446951 83643748 - MGP_NODShiLtJ_P0055121 Pde11a protein_coding protein_coding MGP_NODShiLtJ_T0013421.1 MGP_NODShiLtJ_G0011529.1 mouse_genomes_project 2 56251628 56252464 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013419.1 MGP_NODShiLtJ_G0011527.1 mouse_genomes_project 2 55674202 55674867 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0055394.1 MGP_NODShiLtJ_G0025752.1 mouse_genomes_project 2 93813126 93816296 + MGP_NODShiLtJ_P0055394 Prg2 protein_coding protein_coding MGP_NODShiLtJ_T0017652.1 MGP_NODShiLtJ_G0015307.1 mouse_genomes_project 2 98821032 98825336 + Gm13759 processed_transcript processed_transcript MGP_NODShiLtJ_T0007317.1 MGP_NODShiLtJ_G0005990.1 mouse_genomes_project 2 178130011 178130143 - Gm23925 lincRNA lincRNA MGP_NODShiLtJ_T0101790.1 MGP_NODShiLtJ_G0039958.1 mouse_genomes_project 2 36858023 36858476 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004033.1 MGP_NODShiLtJ_G0003568.1 mouse_genomes_project 2 146078982 146080006 - Gm14041 antisense antisense MGP_NODShiLtJ_T0010311.1 MGP_NODShiLtJ_G0008444.1 mouse_genomes_project 2 56173155 56173305 + Gm22095 miRNA miRNA MGP_NODShiLtJ_T0053854.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32865197 32888541 + MGP_NODShiLtJ_P0053854 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0053855.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32865214 32887605 + MGP_NODShiLtJ_P0053855 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0053856.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32874540 32889824 + MGP_NODShiLtJ_P0053856 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0053857.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32874572 32889817 + MGP_NODShiLtJ_P0053857 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0053858.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32874586 32889817 + MGP_NODShiLtJ_P0053858 St6galnac6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0053859.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32875615 32889815 + MGP_NODShiLtJ_P0053859 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0053860.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32875629 32885846 + St6galnac6 protein_coding retained_intron MGP_NODShiLtJ_T0053861.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32876008 32889815 + MGP_NODShiLtJ_P0053861 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0053862.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32876261 32879895 + MGP_NODShiLtJ_P0053862 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0053863.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32876557 32883075 + MGP_NODShiLtJ_P0053863 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0053864.1 MGP_NODShiLtJ_G0025452.1 mouse_genomes_project 2 32876587 32883095 + MGP_NODShiLtJ_P0053864 St6galnac6 protein_coding protein_coding MGP_NODShiLtJ_T0004072.1 MGP_NODShiLtJ_G0003596.1 mouse_genomes_project 2 171058119 171061218 - Gm14154 antisense antisense MGP_NODShiLtJ_T0058857.1 MGP_NODShiLtJ_G0026681.1 mouse_genomes_project 2 184970500 184977458 - MGP_NODShiLtJ_P0058857 Wfdc9 protein_coding protein_coding MGP_NODShiLtJ_T0058858.1 MGP_NODShiLtJ_G0026681.1 mouse_genomes_project 2 184970656 184972633 - MGP_NODShiLtJ_P0058858 Wfdc9 protein_coding protein_coding MGP_NODShiLtJ_T0095885.1 MGP_NODShiLtJ_G0035602.1 mouse_genomes_project X 76167074 76189990 + MGP_NODShiLtJ_P0095885 Abcd1 protein_coding protein_coding MGP_NODShiLtJ_T0095886.1 MGP_NODShiLtJ_G0035602.1 mouse_genomes_project X 76167217 76182791 + MGP_NODShiLtJ_P0095886 Abcd1 protein_coding protein_coding MGP_NODShiLtJ_T0095025.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2560315 2563825 + Tfe3 protein_coding retained_intron MGP_NODShiLtJ_T0095026.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2560341 2564521 + Tfe3 protein_coding processed_transcript MGP_NODShiLtJ_T0095027.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2560419 2572953 + MGP_NODShiLtJ_P0095027 Tfe3 protein_coding protein_coding MGP_NODShiLtJ_T0095028.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2560450 2572953 + MGP_NODShiLtJ_P0095028 Tfe3 protein_coding protein_coding MGP_NODShiLtJ_T0095029.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2560452 2572955 + Tfe3 protein_coding retained_intron MGP_NODShiLtJ_T0095030.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2560522 2572956 + MGP_NODShiLtJ_P0095030 Tfe3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095031.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2560700 2572943 + MGP_NODShiLtJ_P0095031 Tfe3 protein_coding protein_coding MGP_NODShiLtJ_T0095032.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2561698 2564546 + MGP_NODShiLtJ_P0095032 Tfe3 protein_coding protein_coding MGP_NODShiLtJ_T0095033.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2562407 2572951 + Tfe3 protein_coding retained_intron MGP_NODShiLtJ_T0095034.1 MGP_NODShiLtJ_G0035319.1 mouse_genomes_project X 2567181 2569074 + Tfe3 protein_coding retained_intron MGP_NODShiLtJ_T0096977.1 MGP_NODShiLtJ_G0035895.1 mouse_genomes_project X 149951866 149988867 + MGP_NODShiLtJ_P0096977 Fam199x protein_coding protein_coding MGP_NODShiLtJ_T0011079.1 MGP_NODShiLtJ_G0009212.1 mouse_genomes_project X 100449917 100449981 + Mir7673 miRNA miRNA MGP_NODShiLtJ_T0095848.1 MGP_NODShiLtJ_G0035592.1 mouse_genomes_project X 75755266 75771711 + MGP_NODShiLtJ_P0095848 Zfp275 protein_coding protein_coding MGP_NODShiLtJ_T0095849.1 MGP_NODShiLtJ_G0035592.1 mouse_genomes_project X 75757086 75764469 + Zfp275 protein_coding retained_intron MGP_NODShiLtJ_T0095597.1 MGP_NODShiLtJ_G0035498.1 mouse_genomes_project X 49981667 50035703 - MGP_NODShiLtJ_P0095597 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095598.1 MGP_NODShiLtJ_G0035498.1 mouse_genomes_project X 49983225 50034949 - MGP_NODShiLtJ_P0095598 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095617.1 MGP_NODShiLtJ_G0035505.1 mouse_genomes_project X 51518579 51859562 - MGP_NODShiLtJ_P0095617 Gpc3 protein_coding protein_coding MGP_NODShiLtJ_T0095618.1 MGP_NODShiLtJ_G0035505.1 mouse_genomes_project X 51630863 51859591 - MGP_NODShiLtJ_P0095618 Gpc3 protein_coding protein_coding MGP_NODShiLtJ_T0096228.1 MGP_NODShiLtJ_G0035658.1 mouse_genomes_project X 80815420 80953422 + MGP_NODShiLtJ_P0096228 protein_coding protein_coding MGP_NODShiLtJ_T0098122.1 MGP_NODShiLtJ_G0036534.1 mouse_genomes_project X 14344720 14344839 - n-R5s5 rRNA rRNA MGP_NODShiLtJ_T0097043.1 MGP_NODShiLtJ_G0035916.1 mouse_genomes_project X 153926642 153938165 + Prps1 protein_coding processed_transcript MGP_NODShiLtJ_T0097044.1 MGP_NODShiLtJ_G0035916.1 mouse_genomes_project X 153926642 153948855 + MGP_NODShiLtJ_P0097044 Prps1 protein_coding protein_coding MGP_NODShiLtJ_T0016097.1 MGP_NODShiLtJ_G0014205.1 mouse_genomes_project X 8002296 8002404 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095277.1 MGP_NODShiLtJ_G0035393.1 mouse_genomes_project X 16948307 16973240 + MGP_NODShiLtJ_P0095277 Uba1 protein_coding protein_coding MGP_NODShiLtJ_T0095278.1 MGP_NODShiLtJ_G0035393.1 mouse_genomes_project X 16948402 16960440 + Uba1 protein_coding processed_transcript MGP_NODShiLtJ_T0095279.1 MGP_NODShiLtJ_G0035393.1 mouse_genomes_project X 16949408 16959354 + Uba1 protein_coding processed_transcript MGP_NODShiLtJ_T0095280.1 MGP_NODShiLtJ_G0035393.1 mouse_genomes_project X 16953034 16973240 + MGP_NODShiLtJ_P0095280 Uba1 protein_coding protein_coding MGP_NODShiLtJ_T0095281.1 MGP_NODShiLtJ_G0035393.1 mouse_genomes_project X 16968213 16971261 + Uba1 protein_coding processed_transcript MGP_NODShiLtJ_T0095282.1 MGP_NODShiLtJ_G0035393.1 mouse_genomes_project X 16970655 16972266 + Uba1 protein_coding processed_transcript MGP_NODShiLtJ_T0016321.1 MGP_NODShiLtJ_G0014429.1 mouse_genomes_project X 80176508 80177036 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096238.1 MGP_NODShiLtJ_G0035664.1 mouse_genomes_project X 82431684 82729117 - MGP_NODShiLtJ_P0096238 Gm7173 protein_coding protein_coding MGP_NODShiLtJ_T0096239.1 MGP_NODShiLtJ_G0035664.1 mouse_genomes_project X 82685839 82729117 - MGP_NODShiLtJ_P0096239 Gm7173 protein_coding protein_coding MGP_NODShiLtJ_T0016424.1 MGP_NODShiLtJ_G0014532.1 mouse_genomes_project X 104747223 104749108 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011095.1 MGP_NODShiLtJ_G0009228.1 mouse_genomes_project X 142613317 142613427 - Gm26209 miRNA miRNA MGP_NODShiLtJ_T0096272.1 MGP_NODShiLtJ_G0035673.1 mouse_genomes_project X 90463940 90468740 + MGP_NODShiLtJ_P0096272 Samt3 protein_coding protein_coding MGP_NODShiLtJ_T0016741.1 MGP_NODShiLtJ_G0014849.1 mouse_genomes_project X 174655301 174656186 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096842.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233277 147237223 + MGP_NODShiLtJ_P0096842 Armcx1 protein_coding protein_coding MGP_NODShiLtJ_T0096843.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233284 147237232 + MGP_NODShiLtJ_P0096843 Armcx1 protein_coding protein_coding MGP_NODShiLtJ_T0096844.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233302 147234628 + Armcx1 protein_coding processed_transcript MGP_NODShiLtJ_T0096845.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233302 147237225 + MGP_NODShiLtJ_P0096845 Armcx1 protein_coding protein_coding MGP_NODShiLtJ_T0096846.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233303 147237232 + MGP_NODShiLtJ_P0096846 Armcx1 protein_coding protein_coding MGP_NODShiLtJ_T0096847.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233317 147234818 + Armcx1 protein_coding processed_transcript MGP_NODShiLtJ_T0096848.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233317 147234343 + Armcx1 protein_coding processed_transcript MGP_NODShiLtJ_T0096849.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233327 147237223 + MGP_NODShiLtJ_P0096849 Armcx1 protein_coding protein_coding MGP_NODShiLtJ_T0096850.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147233334 147237232 + MGP_NODShiLtJ_P0096850 Armcx1 protein_coding protein_coding MGP_NODShiLtJ_T0096851.1 MGP_NODShiLtJ_G0035853.1 mouse_genomes_project X 147234571 147235830 + Armcx1 protein_coding processed_transcript MGP_NODShiLtJ_T0016092.1 MGP_NODShiLtJ_G0014200.1 mouse_genomes_project X 7159009 7159208 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016488.1 MGP_NODShiLtJ_G0014596.1 mouse_genomes_project X 113383330 113384171 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096542.1 MGP_NODShiLtJ_G0035745.1 mouse_genomes_project X 108931753 108936800 + MGP_NODShiLtJ_P0096542 protein_coding protein_coding MGP_NODShiLtJ_T0096543.1 MGP_NODShiLtJ_G0035745.1 mouse_genomes_project X 108931783 108936802 + protein_coding processed_transcript MGP_NODShiLtJ_T0096544.1 MGP_NODShiLtJ_G0035745.1 mouse_genomes_project X 108934832 108936804 + MGP_NODShiLtJ_P0096544 protein_coding protein_coding MGP_NODShiLtJ_T0096803.1 MGP_NODShiLtJ_G0035840.1 mouse_genomes_project X 146657728 146679180 + MGP_NODShiLtJ_P0096803 Arl13a protein_coding protein_coding MGP_NODShiLtJ_T0011101.1 MGP_NODShiLtJ_G0009234.1 mouse_genomes_project X 153766879 153766944 + Mir3475 miRNA miRNA MGP_NODShiLtJ_T0016478.1 MGP_NODShiLtJ_G0014586.1 mouse_genomes_project X 112588311 112588830 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096551.1 MGP_NODShiLtJ_G0035747.1 mouse_genomes_project X 109238715 109243368 - MGP_NODShiLtJ_P0096551 Rgag4 protein_coding protein_coding MGP_NODShiLtJ_T0096552.1 MGP_NODShiLtJ_G0035747.1 mouse_genomes_project X 109238715 109243476 - MGP_NODShiLtJ_P0096552 Rgag4 protein_coding protein_coding MGP_NODShiLtJ_T0096553.1 MGP_NODShiLtJ_G0035747.1 mouse_genomes_project X 109238905 109239772 - Rgag4 protein_coding processed_transcript MGP_NODShiLtJ_T0016228.1 MGP_NODShiLtJ_G0014336.1 mouse_genomes_project X 58578660 58580091 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016369.1 MGP_NODShiLtJ_G0014477.1 mouse_genomes_project X 94004852 94005044 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016190.1 MGP_NODShiLtJ_G0014298.1 mouse_genomes_project X 46512726 46516367 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096284.1 MGP_NODShiLtJ_G0035682.1 mouse_genomes_project X 98404103 98404784 + MGP_NODShiLtJ_P0096284 Gm5941 protein_coding protein_coding MGP_NODShiLtJ_T0099711.1 MGP_NODShiLtJ_G0038105.1 mouse_genomes_project X 159698043 159698141 - Gm27659 snRNA snRNA MGP_NODShiLtJ_T0097530.1 MGP_NODShiLtJ_G0036035.1 mouse_genomes_project X 181460784 181461843 - MGP_NODShiLtJ_P0097530 Gm17604 protein_coding protein_coding MGP_NODShiLtJ_T0016140.1 MGP_NODShiLtJ_G0014248.1 mouse_genomes_project X 20116062 20116512 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100948.1 MGP_NODShiLtJ_G0039342.1 mouse_genomes_project X 76275304 76275369 + Gm23615 snoRNA snoRNA MGP_NODShiLtJ_T0102281.1 MGP_NODShiLtJ_G0040447.1 mouse_genomes_project X 166826607 166827993 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016723.1 MGP_NODShiLtJ_G0014831.1 mouse_genomes_project X 172029244 172030214 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016342.1 MGP_NODShiLtJ_G0014450.1 mouse_genomes_project X 84778801 84779524 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097045.1 MGP_NODShiLtJ_G0035917.1 mouse_genomes_project X 154021171 154024309 - Tsc22d3 protein_coding processed_transcript MGP_NODShiLtJ_T0097046.1 MGP_NODShiLtJ_G0035917.1 mouse_genomes_project X 154021171 154024829 - MGP_NODShiLtJ_P0097046 Tsc22d3 protein_coding protein_coding MGP_NODShiLtJ_T0097047.1 MGP_NODShiLtJ_G0035917.1 mouse_genomes_project X 154021180 154024742 - Tsc22d3 protein_coding retained_intron MGP_NODShiLtJ_T0097048.1 MGP_NODShiLtJ_G0035917.1 mouse_genomes_project X 154021902 154085322 - MGP_NODShiLtJ_P0097048 Tsc22d3 protein_coding protein_coding MGP_NODShiLtJ_T0097049.1 MGP_NODShiLtJ_G0035917.1 mouse_genomes_project X 154021991 154029998 - MGP_NODShiLtJ_P0097049 Tsc22d3 protein_coding protein_coding MGP_NODShiLtJ_T0097050.1 MGP_NODShiLtJ_G0035917.1 mouse_genomes_project X 154024743 154030189 - Tsc22d3 protein_coding processed_transcript MGP_NODShiLtJ_T0011065.1 MGP_NODShiLtJ_G0009198.1 mouse_genomes_project X 69585737 69585815 - Mir547 miRNA miRNA MGP_NODShiLtJ_T0009340.1 MGP_NODShiLtJ_G0007482.1 mouse_genomes_project X 127353377 127353746 + Gm28579 lincRNA lincRNA MGP_NODShiLtJ_T0101232.1 MGP_NODShiLtJ_G0039526.1 mouse_genomes_project X 111260405 111261034 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101233.1 MGP_NODShiLtJ_G0039526.1 mouse_genomes_project X 111260509 111260905 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0016627.1 MGP_NODShiLtJ_G0014735.1 mouse_genomes_project X 150051850 150055092 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096528.1 MGP_NODShiLtJ_G0035742.1 mouse_genomes_project X 108630530 108705518 + MGP_NODShiLtJ_P0096528 Taf1 protein_coding protein_coding MGP_NODShiLtJ_T0096529.1 MGP_NODShiLtJ_G0035742.1 mouse_genomes_project X 108630537 108708439 + MGP_NODShiLtJ_P0096529 Taf1 protein_coding protein_coding MGP_NODShiLtJ_T0096530.1 MGP_NODShiLtJ_G0035742.1 mouse_genomes_project X 108630555 108705518 + MGP_NODShiLtJ_P0096530 Taf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096531.1 MGP_NODShiLtJ_G0035742.1 mouse_genomes_project X 108630555 108649400 + MGP_NODShiLtJ_P0096531 Taf1 protein_coding protein_coding MGP_NODShiLtJ_T0096532.1 MGP_NODShiLtJ_G0035742.1 mouse_genomes_project X 108656510 108705518 + Taf1 protein_coding retained_intron MGP_NODShiLtJ_T0096533.1 MGP_NODShiLtJ_G0035742.1 mouse_genomes_project X 108695030 108705055 + Taf1 protein_coding processed_transcript MGP_NODShiLtJ_T0016208.1 MGP_NODShiLtJ_G0014316.1 mouse_genomes_project X 52153022 52154420 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095523.1 MGP_NODShiLtJ_G0035475.1 mouse_genomes_project X 46922983 46952710 + MGP_NODShiLtJ_P0095523 Xpnpep2 protein_coding protein_coding MGP_NODShiLtJ_T0095524.1 MGP_NODShiLtJ_G0035475.1 mouse_genomes_project X 46923177 46949746 + MGP_NODShiLtJ_P0095524 Xpnpep2 protein_coding protein_coding MGP_NODShiLtJ_T0095525.1 MGP_NODShiLtJ_G0035475.1 mouse_genomes_project X 46923179 46926415 + Xpnpep2 protein_coding processed_transcript MGP_NODShiLtJ_T0095526.1 MGP_NODShiLtJ_G0035475.1 mouse_genomes_project X 46923187 46952399 + MGP_NODShiLtJ_P0095526 Xpnpep2 protein_coding protein_coding MGP_NODShiLtJ_T0095527.1 MGP_NODShiLtJ_G0035475.1 mouse_genomes_project X 46943480 46946882 + Xpnpep2 protein_coding processed_transcript MGP_NODShiLtJ_T0016419.1 MGP_NODShiLtJ_G0014527.1 mouse_genomes_project X 103496402 103496937 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016500.1 MGP_NODShiLtJ_G0014608.1 mouse_genomes_project X 115192439 115192910 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016173.1 MGP_NODShiLtJ_G0014281.1 mouse_genomes_project X 41281250 41281908 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016240.1 MGP_NODShiLtJ_G0014348.1 mouse_genomes_project X 61095789 61096245 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009320.1 MGP_NODShiLtJ_G0007475.1 mouse_genomes_project X 107743768 107752540 + Gm14902 lincRNA lincRNA MGP_NODShiLtJ_T0095345.1 MGP_NODShiLtJ_G0035412.1 mouse_genomes_project X 20669838 20694398 + MGP_NODShiLtJ_P0095345 Gm4907 protein_coding protein_coding MGP_NODShiLtJ_T0095346.1 MGP_NODShiLtJ_G0035412.1 mouse_genomes_project X 20679789 20694288 + MGP_NODShiLtJ_P0095346 Gm4907 protein_coding protein_coding MGP_NODShiLtJ_T0016783.1 MGP_NODShiLtJ_G0014891.1 mouse_genomes_project X 184797911 184798380 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016529.1 MGP_NODShiLtJ_G0014637.1 mouse_genomes_project X 122185842 122187622 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016587.1 MGP_NODShiLtJ_G0014695.1 mouse_genomes_project X 142044234 142045494 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095234.1 MGP_NODShiLtJ_G0035375.1 mouse_genomes_project X 9681379 9681900 + MGP_NODShiLtJ_P0095234 Gm14501 protein_coding protein_coding MGP_NODShiLtJ_T0016061.1 MGP_NODShiLtJ_G0014169.1 mouse_genomes_project X 727564 728638 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096672.1 MGP_NODShiLtJ_G0035786.1 mouse_genomes_project X 114422628 114587625 + MGP_NODShiLtJ_P0096672 Gm5127 protein_coding protein_coding MGP_NODShiLtJ_T0096673.1 MGP_NODShiLtJ_G0035786.1 mouse_genomes_project X 114422628 114586930 + MGP_NODShiLtJ_P0096673 Gm5127 protein_coding protein_coding MGP_NODShiLtJ_T0009285.1 MGP_NODShiLtJ_G0007449.1 mouse_genomes_project X 10328703 10376149 + Gm14505 lincRNA lincRNA MGP_NODShiLtJ_T0016229.1 MGP_NODShiLtJ_G0014337.1 mouse_genomes_project X 58651708 58652170 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009362.1 MGP_NODShiLtJ_G0007497.1 mouse_genomes_project X 183460413 183467203 - Gm15230 lincRNA lincRNA MGP_NODShiLtJ_T0016473.1 MGP_NODShiLtJ_G0014581.1 mouse_genomes_project X 111397789 111398803 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095308.1 MGP_NODShiLtJ_G0035398.1 mouse_genomes_project X 17182678 17187246 + MGP_NODShiLtJ_P0095308 Timp1 protein_coding protein_coding MGP_NODShiLtJ_T0095309.1 MGP_NODShiLtJ_G0035398.1 mouse_genomes_project X 17182733 17187248 + MGP_NODShiLtJ_P0095309 Timp1 protein_coding protein_coding MGP_NODShiLtJ_T0016495.1 MGP_NODShiLtJ_G0014603.1 mouse_genomes_project X 114509023 114510379 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095243.1 MGP_NODShiLtJ_G0035380.1 mouse_genomes_project X 12732104 12761997 - MGP_NODShiLtJ_P0095243 Ndp protein_coding protein_coding MGP_NODShiLtJ_T0095546.1 MGP_NODShiLtJ_G0035481.1 mouse_genomes_project X 47354009 47394269 - Aifm1 protein_coding retained_intron MGP_NODShiLtJ_T0095547.1 MGP_NODShiLtJ_G0035481.1 mouse_genomes_project X 47354009 47394402 - MGP_NODShiLtJ_P0095547 Aifm1 protein_coding protein_coding MGP_NODShiLtJ_T0095548.1 MGP_NODShiLtJ_G0035481.1 mouse_genomes_project X 47354009 47394406 - MGP_NODShiLtJ_P0095548 Aifm1 protein_coding protein_coding MGP_NODShiLtJ_T0095549.1 MGP_NODShiLtJ_G0035481.1 mouse_genomes_project X 47354010 47361966 - Aifm1 protein_coding processed_transcript MGP_NODShiLtJ_T0095550.1 MGP_NODShiLtJ_G0035481.1 mouse_genomes_project X 47364527 47365588 - Aifm1 protein_coding processed_transcript MGP_NODShiLtJ_T0009321.1 MGP_NODShiLtJ_G0007476.1 mouse_genomes_project X 110912284 110918821 - Xist lincRNA lincRNA MGP_NODShiLtJ_T0009322.1 MGP_NODShiLtJ_G0007476.1 mouse_genomes_project X 110912661 110935792 - Xist lincRNA lincRNA MGP_NODShiLtJ_T0009323.1 MGP_NODShiLtJ_G0007476.1 mouse_genomes_project X 110920967 110921919 - Xist lincRNA lincRNA MGP_NODShiLtJ_T0016206.1 MGP_NODShiLtJ_G0014314.1 mouse_genomes_project X 52037889 52038212 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095681.1 MGP_NODShiLtJ_G0035532.1 mouse_genomes_project X 56920224 56943383 + MGP_NODShiLtJ_P0095681 Vgll1 protein_coding protein_coding MGP_NODShiLtJ_T0095682.1 MGP_NODShiLtJ_G0035532.1 mouse_genomes_project X 56921429 56942372 + MGP_NODShiLtJ_P0095682 Vgll1 protein_coding protein_coding MGP_NODShiLtJ_T0095683.1 MGP_NODShiLtJ_G0035532.1 mouse_genomes_project X 56921491 56943383 + MGP_NODShiLtJ_P0095683 Vgll1 protein_coding protein_coding MGP_NODShiLtJ_T0095684.1 MGP_NODShiLtJ_G0035532.1 mouse_genomes_project X 56935232 56938951 + MGP_NODShiLtJ_P0095684 Vgll1 protein_coding protein_coding MGP_NODShiLtJ_T0100982.1 MGP_NODShiLtJ_G0039376.1 mouse_genomes_project X 171922064 171922161 - Gm23404 snoRNA snoRNA MGP_NODShiLtJ_T0099697.1 MGP_NODShiLtJ_G0038091.1 mouse_genomes_project X 117340763 117340930 - Gm23322 snRNA snRNA MGP_NODShiLtJ_T0016086.1 MGP_NODShiLtJ_G0014194.1 mouse_genomes_project X 5892880 5893313 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016164.1 MGP_NODShiLtJ_G0014272.1 mouse_genomes_project X 38363642 38364753 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011657.1 MGP_NODShiLtJ_G0009790.1 mouse_genomes_project X 111070193 111070264 + Gm27798 misc_RNA misc_RNA MGP_NODShiLtJ_T0097561.1 MGP_NODShiLtJ_G0036043.1 mouse_genomes_project X 183110256 183175226 - MGP_NODShiLtJ_P0097561 Egfl6 protein_coding protein_coding MGP_NODShiLtJ_T0011075.1 MGP_NODShiLtJ_G0009208.1 mouse_genomes_project X 76793809 76793888 - Mir7091 miRNA miRNA MGP_NODShiLtJ_T0016777.1 MGP_NODShiLtJ_G0014885.1 mouse_genomes_project X 183070350 183071176 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097350.1 MGP_NODShiLtJ_G0035990.1 mouse_genomes_project X 173057950 173108871 - MGP_NODShiLtJ_P0097350 Sms protein_coding protein_coding MGP_NODShiLtJ_T0097351.1 MGP_NODShiLtJ_G0035990.1 mouse_genomes_project X 173059791 173108650 - MGP_NODShiLtJ_P0097351 Sms protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097352.1 MGP_NODShiLtJ_G0035990.1 mouse_genomes_project X 173071300 173076268 - Sms protein_coding retained_intron MGP_NODShiLtJ_T0097353.1 MGP_NODShiLtJ_G0035990.1 mouse_genomes_project X 173074280 173108628 - Sms protein_coding retained_intron MGP_NODShiLtJ_T0097354.1 MGP_NODShiLtJ_G0035990.1 mouse_genomes_project X 173081260 173107974 - MGP_NODShiLtJ_P0097354 Sms protein_coding protein_coding MGP_NODShiLtJ_T0102271.1 MGP_NODShiLtJ_G0040437.1 mouse_genomes_project X 110113702 110151613 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095599.1 MGP_NODShiLtJ_G0035499.1 mouse_genomes_project X 50101843 50121048 - MGP_NODShiLtJ_P0095599 Rap2c protein_coding protein_coding MGP_NODShiLtJ_T0009345.1 MGP_NODShiLtJ_G0007487.1 mouse_genomes_project X 154290988 154316734 + Eif2c5 lincRNA lincRNA MGP_NODShiLtJ_T0096747.1 MGP_NODShiLtJ_G0035816.1 mouse_genomes_project X 124200140 124201014 + MGP_NODShiLtJ_P0096747 Ube2dnl1 protein_coding protein_coding MGP_NODShiLtJ_T0016434.1 MGP_NODShiLtJ_G0014542.1 mouse_genomes_project X 107580729 107581129 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005507.1 MGP_NODShiLtJ_G0004640.1 mouse_genomes_project X 2853202 2906686 + antisense antisense MGP_NODShiLtJ_T0005508.1 MGP_NODShiLtJ_G0004640.1 mouse_genomes_project X 2882111 2894269 + antisense antisense MGP_NODShiLtJ_T0005509.1 MGP_NODShiLtJ_G0004640.1 mouse_genomes_project X 2882187 2907404 + antisense antisense MGP_NODShiLtJ_T0005510.1 MGP_NODShiLtJ_G0004640.1 mouse_genomes_project X 2882267 2909064 + antisense antisense MGP_NODShiLtJ_T0005511.1 MGP_NODShiLtJ_G0004640.1 mouse_genomes_project X 2884539 2907401 + antisense antisense MGP_NODShiLtJ_T0016493.1 MGP_NODShiLtJ_G0014601.1 mouse_genomes_project X 114462150 114462443 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011092.1 MGP_NODShiLtJ_G0009225.1 mouse_genomes_project X 113055389 113055487 - Mir325 miRNA miRNA MGP_NODShiLtJ_T0016515.1 MGP_NODShiLtJ_G0014623.1 mouse_genomes_project X 120659785 120660430 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016484.1 MGP_NODShiLtJ_G0014592.1 mouse_genomes_project X 112999691 113000428 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097060.1 MGP_NODShiLtJ_G0035921.1 mouse_genomes_project X 154476342 154484593 - MGP_NODShiLtJ_P0097060 Psmd10 protein_coding protein_coding MGP_NODShiLtJ_T0096592.1 MGP_NODShiLtJ_G0035761.1 mouse_genomes_project X 110759535 110768729 + MGP_NODShiLtJ_P0096592 Cdx4 protein_coding protein_coding MGP_NODShiLtJ_T0005504.1 MGP_NODShiLtJ_G0004638.1 mouse_genomes_project X 2340391 2347871 + Ppp1r3fos antisense antisense MGP_NODShiLtJ_T0005505.1 MGP_NODShiLtJ_G0004638.1 mouse_genomes_project X 2341283 2345273 + Ppp1r3fos antisense antisense MGP_NODShiLtJ_T0099660.1 MGP_NODShiLtJ_G0038054.1 mouse_genomes_project X 18970930 18971033 + Gm25812 snRNA snRNA MGP_NODShiLtJ_T0095734.1 MGP_NODShiLtJ_G0035552.1 mouse_genomes_project X 65068899 65076102 - MGP_NODShiLtJ_P0095734 Slitrk4 protein_coding protein_coding MGP_NODShiLtJ_T0095735.1 MGP_NODShiLtJ_G0035552.1 mouse_genomes_project X 65071850 65074945 - MGP_NODShiLtJ_P0095735 Slitrk4 protein_coding protein_coding MGP_NODShiLtJ_T0016511.1 MGP_NODShiLtJ_G0014619.1 mouse_genomes_project X 118360584 118362136 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016158.1 MGP_NODShiLtJ_G0014266.1 mouse_genomes_project X 36911511 36912081 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095261.1 MGP_NODShiLtJ_G0035388.1 mouse_genomes_project X 16616905 16665966 + MGP_NODShiLtJ_P0095261 Rp2 protein_coding protein_coding MGP_NODShiLtJ_T0095262.1 MGP_NODShiLtJ_G0035388.1 mouse_genomes_project X 16616999 16671520 + MGP_NODShiLtJ_P0095262 Rp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095263.1 MGP_NODShiLtJ_G0035388.1 mouse_genomes_project X 16617043 16671497 + MGP_NODShiLtJ_P0095263 Rp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096326.1 MGP_NODShiLtJ_G0035694.1 mouse_genomes_project X 100754383 100761053 - MGP_NODShiLtJ_P0096326 Maged1 protein_coding protein_coding MGP_NODShiLtJ_T0096327.1 MGP_NODShiLtJ_G0035694.1 mouse_genomes_project X 100754385 100756745 - Maged1 protein_coding retained_intron MGP_NODShiLtJ_T0096328.1 MGP_NODShiLtJ_G0035694.1 mouse_genomes_project X 100754385 100760900 - Maged1 protein_coding retained_intron MGP_NODShiLtJ_T0096329.1 MGP_NODShiLtJ_G0035694.1 mouse_genomes_project X 100754385 100756474 - Maged1 protein_coding retained_intron MGP_NODShiLtJ_T0096330.1 MGP_NODShiLtJ_G0035694.1 mouse_genomes_project X 100754991 100756794 - Maged1 protein_coding retained_intron MGP_NODShiLtJ_T0096331.1 MGP_NODShiLtJ_G0035694.1 mouse_genomes_project X 100756584 100757736 - Maged1 protein_coding retained_intron MGP_NODShiLtJ_T0096332.1 MGP_NODShiLtJ_G0035694.1 mouse_genomes_project X 100759403 100760913 - Maged1 protein_coding retained_intron MGP_NODShiLtJ_T0096282.1 MGP_NODShiLtJ_G0035680.1 mouse_genomes_project X 97414890 97418365 + MGP_NODShiLtJ_P0096282 Gm14781 protein_coding protein_coding MGP_NODShiLtJ_T0011046.1 MGP_NODShiLtJ_G0009179.1 mouse_genomes_project X 61373797 61373892 + Gm24396 miRNA miRNA MGP_NODShiLtJ_T0016143.1 MGP_NODShiLtJ_G0014251.1 mouse_genomes_project X 33049887 33050262 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016201.1 MGP_NODShiLtJ_G0014309.1 mouse_genomes_project X 50359392 50360509 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097013.1 MGP_NODShiLtJ_G0035909.1 mouse_genomes_project X 153178425 153181212 - MGP_NODShiLtJ_P0097013 Ripply1 protein_coding protein_coding MGP_NODShiLtJ_T0011093.1 MGP_NODShiLtJ_G0009226.1 mouse_genomes_project X 114082902 114083012 + Mir6382 miRNA miRNA MGP_NODShiLtJ_T0096247.1 MGP_NODShiLtJ_G0035668.1 mouse_genomes_project X 87383570 87384817 - MGP_NODShiLtJ_P0096247 Tsga8 protein_coding protein_coding MGP_NODShiLtJ_T0097527.1 MGP_NODShiLtJ_G0036034.1 mouse_genomes_project X 181436236 181454287 + MGP_NODShiLtJ_P0097527 Fancb protein_coding protein_coding MGP_NODShiLtJ_T0097528.1 MGP_NODShiLtJ_G0036034.1 mouse_genomes_project X 181436236 181454287 + MGP_NODShiLtJ_P0097528 Fancb protein_coding protein_coding MGP_NODShiLtJ_T0097529.1 MGP_NODShiLtJ_G0036034.1 mouse_genomes_project X 181436356 181454290 + MGP_NODShiLtJ_P0097529 Fancb protein_coding protein_coding MGP_NODShiLtJ_T0016513.1 MGP_NODShiLtJ_G0014621.1 mouse_genomes_project X 119158248 119159392 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100957.1 MGP_NODShiLtJ_G0039351.1 mouse_genomes_project X 99193792 99193875 + Gm24123 snoRNA snoRNA MGP_NODShiLtJ_T0016289.1 MGP_NODShiLtJ_G0014397.1 mouse_genomes_project X 72735780 72736125 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096600.1 MGP_NODShiLtJ_G0035767.1 mouse_genomes_project X 111466519 111493092 - MGP_NODShiLtJ_P0096600 Rlim protein_coding protein_coding MGP_NODShiLtJ_T0096601.1 MGP_NODShiLtJ_G0035767.1 mouse_genomes_project X 111466519 111493092 - MGP_NODShiLtJ_P0096601 Rlim protein_coding protein_coding MGP_NODShiLtJ_T0096602.1 MGP_NODShiLtJ_G0035767.1 mouse_genomes_project X 111489602 111493092 - Rlim protein_coding retained_intron MGP_NODShiLtJ_T0018505.1 MGP_NODShiLtJ_G0015655.1 mouse_genomes_project X 147605934 147619319 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018506.1 MGP_NODShiLtJ_G0015655.1 mouse_genomes_project X 147606733 147627914 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018507.1 MGP_NODShiLtJ_G0015655.1 mouse_genomes_project X 147611106 147619773 - processed_transcript processed_transcript MGP_NODShiLtJ_T0100933.1 MGP_NODShiLtJ_G0039327.1 mouse_genomes_project X 1962311 1962387 + Gm26401 snoRNA snoRNA MGP_NODShiLtJ_T0016328.1 MGP_NODShiLtJ_G0014436.1 mouse_genomes_project X 81407831 81413299 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016479.1 MGP_NODShiLtJ_G0014587.1 mouse_genomes_project X 112588332 112588830 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016361.1 MGP_NODShiLtJ_G0014469.1 mouse_genomes_project X 91359318 91359628 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097294.1 MGP_NODShiLtJ_G0035968.1 mouse_genomes_project X 167425527 167607363 - MGP_NODShiLtJ_P0097294 Shroom2 protein_coding protein_coding MGP_NODShiLtJ_T0097295.1 MGP_NODShiLtJ_G0035968.1 mouse_genomes_project X 167426010 167470406 - Shroom2 protein_coding processed_transcript MGP_NODShiLtJ_T0097296.1 MGP_NODShiLtJ_G0035968.1 mouse_genomes_project X 167426010 167607367 - MGP_NODShiLtJ_P0097296 Shroom2 protein_coding protein_coding MGP_NODShiLtJ_T0097297.1 MGP_NODShiLtJ_G0035968.1 mouse_genomes_project X 167428546 167503616 - Shroom2 protein_coding processed_transcript MGP_NODShiLtJ_T0097298.1 MGP_NODShiLtJ_G0035968.1 mouse_genomes_project X 167434832 167469787 - Shroom2 protein_coding processed_transcript MGP_NODShiLtJ_T0097299.1 MGP_NODShiLtJ_G0035968.1 mouse_genomes_project X 167435041 167469973 - Shroom2 protein_coding processed_transcript MGP_NODShiLtJ_T0096578.1 MGP_NODShiLtJ_G0035754.1 mouse_genomes_project X 109917679 109918425 - MGP_NODShiLtJ_P0096578 Gm9112 protein_coding protein_coding MGP_NODShiLtJ_T0016410.1 MGP_NODShiLtJ_G0014518.1 mouse_genomes_project X 101316636 101317881 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099661.1 MGP_NODShiLtJ_G0038055.1 mouse_genomes_project X 19459572 19459682 + Gm26131 snRNA snRNA MGP_NODShiLtJ_T0016710.1 MGP_NODShiLtJ_G0014818.1 mouse_genomes_project X 168457506 168457891 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009313.1 MGP_NODShiLtJ_G0007469.1 mouse_genomes_project X 90211843 90213614 + Gm14762 lincRNA lincRNA MGP_NODShiLtJ_T0009314.1 MGP_NODShiLtJ_G0007469.1 mouse_genomes_project X 90212612 90220759 + Gm14762 lincRNA lincRNA MGP_NODShiLtJ_T0009296.1 MGP_NODShiLtJ_G0007456.1 mouse_genomes_project X 35401661 35407687 + Gm7598 lincRNA lincRNA MGP_NODShiLtJ_T0096285.1 MGP_NODShiLtJ_G0035683.1 mouse_genomes_project X 99186238 99186932 + MGP_NODShiLtJ_P0096285 1700084M14Rik protein_coding protein_coding MGP_NODShiLtJ_T0016165.1 MGP_NODShiLtJ_G0014273.1 mouse_genomes_project X 38907758 38908014 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016083.1 MGP_NODShiLtJ_G0014191.1 mouse_genomes_project X 4049757 4050583 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016118.1 MGP_NODShiLtJ_G0014226.1 mouse_genomes_project X 15027096 15027502 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097505.1 MGP_NODShiLtJ_G0036029.1 mouse_genomes_project X 180742692 180775551 + MGP_NODShiLtJ_P0097505 Vegfd protein_coding protein_coding MGP_NODShiLtJ_T0097506.1 MGP_NODShiLtJ_G0036029.1 mouse_genomes_project X 180761926 180771475 + Vegfd protein_coding retained_intron MGP_NODShiLtJ_T0097307.1 MGP_NODShiLtJ_G0035973.1 mouse_genomes_project X 168059620 168095528 + MGP_NODShiLtJ_P0097307 Rragb protein_coding protein_coding MGP_NODShiLtJ_T0097308.1 MGP_NODShiLtJ_G0035973.1 mouse_genomes_project X 168059626 168076329 + MGP_NODShiLtJ_P0097308 Rragb protein_coding protein_coding MGP_NODShiLtJ_T0100949.1 MGP_NODShiLtJ_G0039343.1 mouse_genomes_project X 76789904 76790041 + Snora70 snoRNA snoRNA MGP_NODShiLtJ_T0016767.1 MGP_NODShiLtJ_G0014875.1 mouse_genomes_project X 179749538 179750968 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016226.1 MGP_NODShiLtJ_G0014334.1 mouse_genomes_project X 58356014 58356431 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096693.1 MGP_NODShiLtJ_G0035794.1 mouse_genomes_project X 115917677 115999498 + MGP_NODShiLtJ_P0096693 protein_coding protein_coding MGP_NODShiLtJ_T0096694.1 MGP_NODShiLtJ_G0035794.1 mouse_genomes_project X 115917772 115999339 + MGP_NODShiLtJ_P0096694 protein_coding protein_coding MGP_NODShiLtJ_T0009319.1 MGP_NODShiLtJ_G0007474.1 mouse_genomes_project X 106279101 106289501 - Gm14809 lincRNA lincRNA MGP_NODShiLtJ_T0095616.1 MGP_NODShiLtJ_G0035504.1 mouse_genomes_project X 51278319 51398145 - MGP_NODShiLtJ_P0095616 Gpc4 protein_coding protein_coding MGP_NODShiLtJ_T0016693.1 MGP_NODShiLtJ_G0014801.1 mouse_genomes_project X 165192418 165193067 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101214.1 MGP_NODShiLtJ_G0039514.1 mouse_genomes_project X 2946264 2947084 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0097130.1 MGP_NODShiLtJ_G0035942.1 mouse_genomes_project X 159272623 159346515 - MGP_NODShiLtJ_P0097130 Lhfpl1 protein_coding protein_coding MGP_NODShiLtJ_T0097131.1 MGP_NODShiLtJ_G0035942.1 mouse_genomes_project X 159338482 159346654 - MGP_NODShiLtJ_P0097131 Lhfpl1 protein_coding protein_coding MGP_NODShiLtJ_T0016510.1 MGP_NODShiLtJ_G0014618.1 mouse_genomes_project X 117757231 117759445 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096913.1 MGP_NODShiLtJ_G0035876.1 mouse_genomes_project X 149037451 149038062 - MGP_NODShiLtJ_P0096913 Bex1 protein_coding protein_coding MGP_NODShiLtJ_T0096914.1 MGP_NODShiLtJ_G0035876.1 mouse_genomes_project X 149038022 149038447 - Bex1 protein_coding retained_intron MGP_NODShiLtJ_T0095642.1 MGP_NODShiLtJ_G0035520.1 mouse_genomes_project X 53159906 53162253 - MGP_NODShiLtJ_P0095642 Zfp36l3 protein_coding protein_coding MGP_NODShiLtJ_T0095253.1 MGP_NODShiLtJ_G0035385.1 mouse_genomes_project X 14441516 14490461 - 4930578C19Rik protein_coding processed_transcript MGP_NODShiLtJ_T0095254.1 MGP_NODShiLtJ_G0035385.1 mouse_genomes_project X 14445062 14490435 - MGP_NODShiLtJ_P0095254 4930578C19Rik protein_coding protein_coding MGP_NODShiLtJ_T0011061.1 MGP_NODShiLtJ_G0009194.1 mouse_genomes_project X 68151373 68151452 - Mir465b-2 miRNA miRNA MGP_NODShiLtJ_T0016255.1 MGP_NODShiLtJ_G0014363.1 mouse_genomes_project X 63217981 63218467 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102263.1 MGP_NODShiLtJ_G0040429.1 mouse_genomes_project X 101005176 101007390 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099685.1 MGP_NODShiLtJ_G0038079.1 mouse_genomes_project X 98889711 98889816 + Gm25332 snRNA snRNA MGP_NODShiLtJ_T0016105.1 MGP_NODShiLtJ_G0014213.1 mouse_genomes_project X 9382804 9385029 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096183.1 MGP_NODShiLtJ_G0035640.1 mouse_genomes_project X 77826877 77848282 - MGP_NODShiLtJ_P0096183 Smim9 protein_coding protein_coding MGP_NODShiLtJ_T0096184.1 MGP_NODShiLtJ_G0035640.1 mouse_genomes_project X 77827055 77846149 - MGP_NODShiLtJ_P0096184 Smim9 protein_coding protein_coding MGP_NODShiLtJ_T0096185.1 MGP_NODShiLtJ_G0035640.1 mouse_genomes_project X 77832073 77848299 - Smim9 protein_coding processed_transcript MGP_NODShiLtJ_T0095497.1 MGP_NODShiLtJ_G0035466.1 mouse_genomes_project X 40214656 40952891 - MGP_NODShiLtJ_P0095497 Tenm1 protein_coding protein_coding MGP_NODShiLtJ_T0095498.1 MGP_NODShiLtJ_G0035466.1 mouse_genomes_project X 40214656 40952870 - MGP_NODShiLtJ_P0095498 Tenm1 protein_coding protein_coding MGP_NODShiLtJ_T0095499.1 MGP_NODShiLtJ_G0035466.1 mouse_genomes_project X 40219181 41095339 - MGP_NODShiLtJ_P0095499 Tenm1 protein_coding protein_coding MGP_NODShiLtJ_T0095500.1 MGP_NODShiLtJ_G0035466.1 mouse_genomes_project X 40549552 41300480 - Tenm1 protein_coding retained_intron MGP_NODShiLtJ_T0095501.1 MGP_NODShiLtJ_G0035466.1 mouse_genomes_project X 40645906 41300603 - Tenm1 protein_coding retained_intron MGP_NODShiLtJ_T0097274.1 MGP_NODShiLtJ_G0035963.1 mouse_genomes_project X 166868138 166953020 + MGP_NODShiLtJ_P0097274 Iqsec2 protein_coding protein_coding MGP_NODShiLtJ_T0097275.1 MGP_NODShiLtJ_G0035963.1 mouse_genomes_project X 166868142 166953021 + MGP_NODShiLtJ_P0097275 Iqsec2 protein_coding protein_coding MGP_NODShiLtJ_T0097276.1 MGP_NODShiLtJ_G0035963.1 mouse_genomes_project X 166905692 166931717 + Iqsec2 protein_coding processed_transcript MGP_NODShiLtJ_T0097277.1 MGP_NODShiLtJ_G0035963.1 mouse_genomes_project X 166905692 166921311 + Iqsec2 protein_coding processed_transcript MGP_NODShiLtJ_T0097278.1 MGP_NODShiLtJ_G0035963.1 mouse_genomes_project X 166905692 166921311 + Iqsec2 protein_coding processed_transcript MGP_NODShiLtJ_T0097279.1 MGP_NODShiLtJ_G0035963.1 mouse_genomes_project X 166930723 166951672 + MGP_NODShiLtJ_P0097279 Iqsec2 protein_coding protein_coding MGP_NODShiLtJ_T0011670.1 MGP_NODShiLtJ_G0009803.1 mouse_genomes_project X 154133066 154133368 - Gm22025 misc_RNA misc_RNA MGP_NODShiLtJ_T0095245.1 MGP_NODShiLtJ_G0035382.1 mouse_genomes_project X 13471519 13485242 - Fundc1 protein_coding processed_transcript MGP_NODShiLtJ_T0095246.1 MGP_NODShiLtJ_G0035382.1 mouse_genomes_project X 13471519 13485871 - MGP_NODShiLtJ_P0095246 Fundc1 protein_coding protein_coding MGP_NODShiLtJ_T0095247.1 MGP_NODShiLtJ_G0035382.1 mouse_genomes_project X 13471555 13485919 - MGP_NODShiLtJ_P0095247 Fundc1 protein_coding protein_coding MGP_NODShiLtJ_T0016429.1 MGP_NODShiLtJ_G0014537.1 mouse_genomes_project X 106582848 106583142 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016245.1 MGP_NODShiLtJ_G0014353.1 mouse_genomes_project X 61915031 61915466 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096689.1 MGP_NODShiLtJ_G0035791.1 mouse_genomes_project X 115404628 115410407 - MGP_NODShiLtJ_P0096689 Itm2a protein_coding protein_coding MGP_NODShiLtJ_T0095824.1 MGP_NODShiLtJ_G0035579.1 mouse_genomes_project X 74510842 74529632 - MGP_NODShiLtJ_P0095824 Gabre protein_coding protein_coding MGP_NODShiLtJ_T0095825.1 MGP_NODShiLtJ_G0035579.1 mouse_genomes_project X 74516213 74524611 - Gabre protein_coding processed_transcript MGP_NODShiLtJ_T0095826.1 MGP_NODShiLtJ_G0035579.1 mouse_genomes_project X 74523815 74529632 - Gabre protein_coding retained_intron MGP_NODShiLtJ_T0102285.1 MGP_NODShiLtJ_G0040451.1 mouse_genomes_project X 169674127 169674920 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011035.1 MGP_NODShiLtJ_G0009168.1 mouse_genomes_project X 52362305 52362387 - Mir450b miRNA miRNA MGP_NODShiLtJ_T0011091.1 MGP_NODShiLtJ_G0009224.1 mouse_genomes_project X 113016232 113016320 - Mir384 miRNA miRNA MGP_NODShiLtJ_T0095398.1 MGP_NODShiLtJ_G0035435.1 mouse_genomes_project X 34102964 34104658 - MGP_NODShiLtJ_P0095398 Gm9 protein_coding protein_coding MGP_NODShiLtJ_T0016782.1 MGP_NODShiLtJ_G0014890.1 mouse_genomes_project X 184698792 184699512 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016560.1 MGP_NODShiLtJ_G0014668.1 mouse_genomes_project X 128715313 128716422 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016771.1 MGP_NODShiLtJ_G0014879.1 mouse_genomes_project X 181305161 181305438 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096745.1 MGP_NODShiLtJ_G0035815.1 mouse_genomes_project X 123676806 123783066 + MGP_NODShiLtJ_P0096745 Klhl4 protein_coding protein_coding MGP_NODShiLtJ_T0096746.1 MGP_NODShiLtJ_G0035815.1 mouse_genomes_project X 123676897 123782662 + MGP_NODShiLtJ_P0096746 Klhl4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095840.1 MGP_NODShiLtJ_G0035586.1 mouse_genomes_project X 75364094 75366855 - MGP_NODShiLtJ_P0095840 Pnma5 protein_coding protein_coding MGP_NODShiLtJ_T0095841.1 MGP_NODShiLtJ_G0035586.1 mouse_genomes_project X 75364101 75365855 - MGP_NODShiLtJ_P0095841 Pnma5 protein_coding protein_coding MGP_NODShiLtJ_T0095842.1 MGP_NODShiLtJ_G0035586.1 mouse_genomes_project X 75364432 75366855 - MGP_NODShiLtJ_P0095842 Pnma5 protein_coding protein_coding MGP_NODShiLtJ_T0099652.1 MGP_NODShiLtJ_G0038046.1 mouse_genomes_project X 9449686 9449777 - Gm25552 snRNA snRNA MGP_NODShiLtJ_T0095147.1 MGP_NODShiLtJ_G0035348.1 mouse_genomes_project X 4032445 4033293 + MGP_NODShiLtJ_P0095147 protein_coding protein_coding MGP_NODShiLtJ_T0011077.1 MGP_NODShiLtJ_G0009210.1 mouse_genomes_project X 82028427 82028519 - Gm23556 miRNA miRNA MGP_NODShiLtJ_T0016055.1 MGP_NODShiLtJ_G0014163.1 mouse_genomes_project X 234440 236067 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097596.1 MGP_NODShiLtJ_G0036052.1 mouse_genomes_project X 186077732 186162255 - MGP_NODShiLtJ_P0097596 Hccs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097597.1 MGP_NODShiLtJ_G0036052.1 mouse_genomes_project X 186153412 186162163 - MGP_NODShiLtJ_P0097597 Hccs protein_coding protein_coding MGP_NODShiLtJ_T0097598.1 MGP_NODShiLtJ_G0036052.1 mouse_genomes_project X 186153412 186162177 - MGP_NODShiLtJ_P0097598 Hccs protein_coding protein_coding MGP_NODShiLtJ_T0016096.1 MGP_NODShiLtJ_G0014204.1 mouse_genomes_project X 7982903 7983263 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096930.1 MGP_NODShiLtJ_G0035883.1 mouse_genomes_project X 149512175 149517738 + MGP_NODShiLtJ_P0096930 Tceal5 protein_coding protein_coding MGP_NODShiLtJ_T0009286.1 MGP_NODShiLtJ_G0007450.1 mouse_genomes_project X 11640595 11661419 - Drr1 lincRNA lincRNA MGP_NODShiLtJ_T0009287.1 MGP_NODShiLtJ_G0007450.1 mouse_genomes_project X 11640595 11643238 - Drr1 lincRNA lincRNA MGP_NODShiLtJ_T0096130.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76917936 76959904 + MGP_NODShiLtJ_P0096130 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096131.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76917937 76978829 + MGP_NODShiLtJ_P0096131 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096132.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76917937 76978829 + MGP_NODShiLtJ_P0096132 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096133.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76917973 76965799 + MGP_NODShiLtJ_P0096133 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096137.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76950444 76965861 + MGP_NODShiLtJ_P0096137 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096138.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76950514 76973792 + MGP_NODShiLtJ_P0096138 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096139.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76950522 76978829 + MGP_NODShiLtJ_P0096139 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096140.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76950522 76978905 + MGP_NODShiLtJ_P0096140 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096141.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76950543 76974151 + MGP_NODShiLtJ_P0096141 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096142.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76950548 76958779 + MGP_NODShiLtJ_P0096142 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096144.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76953812 76963081 + MGP_NODShiLtJ_P0096144 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096145.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76955191 76969252 + MGP_NODShiLtJ_P0096145 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096146.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76955225 76978829 + MGP_NODShiLtJ_P0096146 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096147.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76955581 76975337 + MGP_NODShiLtJ_P0096147 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096148.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76955614 76976571 + MGP_NODShiLtJ_P0096148 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096149.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76955632 76959266 + Ikbkg protein_coding retained_intron MGP_NODShiLtJ_T0096150.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76955673 76969749 + MGP_NODShiLtJ_P0096150 Ikbkg protein_coding protein_coding MGP_NODShiLtJ_T0096151.1 MGP_NODShiLtJ_G0035632.1 mouse_genomes_project X 76964797 76973274 + Ikbkg protein_coding processed_transcript MGP_NODShiLtJ_T0016080.1 MGP_NODShiLtJ_G0014188.1 mouse_genomes_project X 3980832 3982921 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094941.1 MGP_NODShiLtJ_G0035297.1 mouse_genomes_project X 738006 740207 - MGP_NODShiLtJ_P0094941 AU022751 protein_coding protein_coding MGP_NODShiLtJ_T0094942.1 MGP_NODShiLtJ_G0035297.1 mouse_genomes_project X 738006 740207 - MGP_NODShiLtJ_P0094942 AU022751 protein_coding protein_coding MGP_NODShiLtJ_T0096810.1 MGP_NODShiLtJ_G0035843.1 mouse_genomes_project X 146785780 146842325 + MGP_NODShiLtJ_P0096810 Cenpi protein_coding protein_coding MGP_NODShiLtJ_T0096811.1 MGP_NODShiLtJ_G0035843.1 mouse_genomes_project X 146785851 146842322 + MGP_NODShiLtJ_P0096811 Cenpi protein_coding protein_coding MGP_NODShiLtJ_T0096812.1 MGP_NODShiLtJ_G0035843.1 mouse_genomes_project X 146785895 146787947 + MGP_NODShiLtJ_P0096812 Cenpi protein_coding protein_coding MGP_NODShiLtJ_T0096813.1 MGP_NODShiLtJ_G0035843.1 mouse_genomes_project X 146789620 146823225 + Cenpi protein_coding processed_transcript MGP_NODShiLtJ_T0096814.1 MGP_NODShiLtJ_G0035843.1 mouse_genomes_project X 146824894 146842323 + Cenpi protein_coding processed_transcript MGP_NODShiLtJ_T0016522.1 MGP_NODShiLtJ_G0014630.1 mouse_genomes_project X 121643230 121643393 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016390.1 MGP_NODShiLtJ_G0014498.1 mouse_genomes_project X 98528717 98530281 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097335.1 MGP_NODShiLtJ_G0035985.1 mouse_genomes_project X 170456208 170457347 + Acot9 protein_coding processed_transcript MGP_NODShiLtJ_T0097336.1 MGP_NODShiLtJ_G0035985.1 mouse_genomes_project X 170456208 170498119 + MGP_NODShiLtJ_P0097336 Acot9 protein_coding protein_coding MGP_NODShiLtJ_T0097337.1 MGP_NODShiLtJ_G0035985.1 mouse_genomes_project X 170456270 170498111 + MGP_NODShiLtJ_P0097337 Acot9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097338.1 MGP_NODShiLtJ_G0035985.1 mouse_genomes_project X 170492030 170497378 + Acot9 protein_coding retained_intron MGP_NODShiLtJ_T0016248.1 MGP_NODShiLtJ_G0014356.1 mouse_genomes_project X 62182183 62183249 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016669.1 MGP_NODShiLtJ_G0014777.1 mouse_genomes_project X 158065727 158066037 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016179.1 MGP_NODShiLtJ_G0014287.1 mouse_genomes_project X 42635084 42635479 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100972.1 MGP_NODShiLtJ_G0039366.1 mouse_genomes_project X 144728949 144729080 - Gm23768 snoRNA snoRNA MGP_NODShiLtJ_T0096394.1 MGP_NODShiLtJ_G0035712.1 mouse_genomes_project X 105771854 105782281 + MGP_NODShiLtJ_P0096394 Yipf6 protein_coding protein_coding MGP_NODShiLtJ_T0096395.1 MGP_NODShiLtJ_G0035712.1 mouse_genomes_project X 105772831 105780785 + MGP_NODShiLtJ_P0096395 Yipf6 protein_coding protein_coding MGP_NODShiLtJ_T0096396.1 MGP_NODShiLtJ_G0035712.1 mouse_genomes_project X 105772859 105775440 + MGP_NODShiLtJ_P0096396 Yipf6 protein_coding protein_coding MGP_NODShiLtJ_T0096397.1 MGP_NODShiLtJ_G0035712.1 mouse_genomes_project X 105773319 105782056 + Yipf6 protein_coding retained_intron MGP_NODShiLtJ_T0096398.1 MGP_NODShiLtJ_G0035712.1 mouse_genomes_project X 105773319 105786166 + MGP_NODShiLtJ_P0096398 Yipf6 protein_coding protein_coding MGP_NODShiLtJ_T0096399.1 MGP_NODShiLtJ_G0035712.1 mouse_genomes_project X 105773765 105781185 + Yipf6 protein_coding retained_intron MGP_NODShiLtJ_T0005539.1 MGP_NODShiLtJ_G0004664.1 mouse_genomes_project X 106331503 106333232 + Gm14808 antisense antisense MGP_NODShiLtJ_T0097077.1 MGP_NODShiLtJ_G0035929.1 mouse_genomes_project X 155844249 155869219 + MGP_NODShiLtJ_P0097077 Nxt2 protein_coding protein_coding MGP_NODShiLtJ_T0097078.1 MGP_NODShiLtJ_G0035929.1 mouse_genomes_project X 155845843 155855621 + Nxt2 protein_coding retained_intron MGP_NODShiLtJ_T0097079.1 MGP_NODShiLtJ_G0035929.1 mouse_genomes_project X 155845983 155867934 + MGP_NODShiLtJ_P0097079 Nxt2 protein_coding protein_coding MGP_NODShiLtJ_T0096369.1 MGP_NODShiLtJ_G0035705.1 mouse_genomes_project X 102773800 102986461 - MGP_NODShiLtJ_P0096369 Hsf3 protein_coding protein_coding MGP_NODShiLtJ_T0016371.1 MGP_NODShiLtJ_G0014479.1 mouse_genomes_project X 94289101 94289374 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094971.1 MGP_NODShiLtJ_G0035308.1 mouse_genomes_project X 2361618 2373260 - MGP_NODShiLtJ_P0094971 Ccdc22 protein_coding protein_coding MGP_NODShiLtJ_T0094972.1 MGP_NODShiLtJ_G0035308.1 mouse_genomes_project X 2361619 2365089 - Ccdc22 protein_coding retained_intron MGP_NODShiLtJ_T0095270.1 MGP_NODShiLtJ_G0035392.1 mouse_genomes_project X 16903397 16939656 + MGP_NODShiLtJ_P0095270 Rbm10 protein_coding protein_coding MGP_NODShiLtJ_T0095271.1 MGP_NODShiLtJ_G0035392.1 mouse_genomes_project X 16903516 16939669 + MGP_NODShiLtJ_P0095271 Rbm10 protein_coding protein_coding MGP_NODShiLtJ_T0095272.1 MGP_NODShiLtJ_G0035392.1 mouse_genomes_project X 16903677 16939669 + MGP_NODShiLtJ_P0095272 Rbm10 protein_coding protein_coding MGP_NODShiLtJ_T0095273.1 MGP_NODShiLtJ_G0035392.1 mouse_genomes_project X 16903679 16937964 + Rbm10 protein_coding processed_transcript MGP_NODShiLtJ_T0095274.1 MGP_NODShiLtJ_G0035392.1 mouse_genomes_project X 16905992 16939452 + MGP_NODShiLtJ_P0095274 Rbm10 protein_coding protein_coding MGP_NODShiLtJ_T0095275.1 MGP_NODShiLtJ_G0035392.1 mouse_genomes_project X 16905992 16939452 + MGP_NODShiLtJ_P0095275 Rbm10 protein_coding protein_coding MGP_NODShiLtJ_T0095276.1 MGP_NODShiLtJ_G0035392.1 mouse_genomes_project X 16905992 16939452 + MGP_NODShiLtJ_P0095276 Rbm10 protein_coding protein_coding MGP_NODShiLtJ_T0016530.1 MGP_NODShiLtJ_G0014638.1 mouse_genomes_project X 123134758 123136327 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095731.1 MGP_NODShiLtJ_G0035550.1 mouse_genomes_project X 64928711 64929506 - MGP_NODShiLtJ_P0095731 Gm6760 protein_coding protein_coding MGP_NODShiLtJ_T0095852.1 MGP_NODShiLtJ_G0035594.1 mouse_genomes_project X 75855276 75856916 - MGP_NODShiLtJ_P0095852 Trex2 protein_coding protein_coding MGP_NODShiLtJ_T0095142.1 MGP_NODShiLtJ_G0035343.1 mouse_genomes_project X 3561524 3564826 - MGP_NODShiLtJ_P0095142 protein_coding protein_coding MGP_NODShiLtJ_T0016518.1 MGP_NODShiLtJ_G0014626.1 mouse_genomes_project X 121160345 121160617 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009334.1 MGP_NODShiLtJ_G0007479.1 mouse_genomes_project X 113020232 113068091 - 5330434G04Rik lincRNA lincRNA MGP_NODShiLtJ_T0009335.1 MGP_NODShiLtJ_G0007479.1 mouse_genomes_project X 113022310 113068091 - 5330434G04Rik lincRNA lincRNA MGP_NODShiLtJ_T0009336.1 MGP_NODShiLtJ_G0007479.1 mouse_genomes_project X 113049301 113068069 - 5330434G04Rik lincRNA lincRNA MGP_NODShiLtJ_T0009337.1 MGP_NODShiLtJ_G0007479.1 mouse_genomes_project X 113051969 113064229 - 5330434G04Rik lincRNA lincRNA MGP_NODShiLtJ_T0016373.1 MGP_NODShiLtJ_G0014481.1 mouse_genomes_project X 94421624 94423105 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016126.1 MGP_NODShiLtJ_G0014234.1 mouse_genomes_project X 16636243 16637315 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016474.1 MGP_NODShiLtJ_G0014582.1 mouse_genomes_project X 111431465 111432915 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100980.1 MGP_NODShiLtJ_G0039374.1 mouse_genomes_project X 166213294 166213400 - Gm24460 snoRNA snoRNA MGP_NODShiLtJ_T0011086.1 MGP_NODShiLtJ_G0009219.1 mouse_genomes_project X 111047200 111047276 - Mir421 miRNA miRNA MGP_NODShiLtJ_T0016219.1 MGP_NODShiLtJ_G0014327.1 mouse_genomes_project X 57483770 57484016 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096989.1 MGP_NODShiLtJ_G0035900.1 mouse_genomes_project X 152387935 152395475 - MGP_NODShiLtJ_P0096989 Serpina7 protein_coding protein_coding MGP_NODShiLtJ_T0096990.1 MGP_NODShiLtJ_G0035900.1 mouse_genomes_project X 152387935 152395477 - MGP_NODShiLtJ_P0096990 Serpina7 protein_coding protein_coding MGP_NODShiLtJ_T0096991.1 MGP_NODShiLtJ_G0035900.1 mouse_genomes_project X 152393745 152395496 - MGP_NODShiLtJ_P0096991 Serpina7 protein_coding protein_coding MGP_NODShiLtJ_T0016383.1 MGP_NODShiLtJ_G0014491.1 mouse_genomes_project X 97008166 97008541 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016634.1 MGP_NODShiLtJ_G0014742.1 mouse_genomes_project X 152519650 152520360 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095715.1 MGP_NODShiLtJ_G0035541.1 mouse_genomes_project X 60095529 60128368 + MGP_NODShiLtJ_P0095715 F9 protein_coding protein_coding MGP_NODShiLtJ_T0016384.1 MGP_NODShiLtJ_G0014492.1 mouse_genomes_project X 97321194 97321582 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016666.1 MGP_NODShiLtJ_G0014774.1 mouse_genomes_project X 156895136 156896166 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096501.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108490868 108507328 - MGP_NODShiLtJ_P0096501 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096502.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108490868 108506394 - MGP_NODShiLtJ_P0096502 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096503.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108490868 108507195 - MGP_NODShiLtJ_P0096503 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096504.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108490868 108506278 - MGP_NODShiLtJ_P0096504 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096505.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108492463 108496219 - Zmym3 protein_coding processed_transcript MGP_NODShiLtJ_T0096506.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108499728 108501399 - Zmym3 protein_coding retained_intron MGP_NODShiLtJ_T0096507.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108500680 108503957 - Zmym3 protein_coding processed_transcript MGP_NODShiLtJ_T0096508.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108500988 108501646 - Zmym3 protein_coding retained_intron MGP_NODShiLtJ_T0096509.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108501408 108503856 - Zmym3 protein_coding retained_intron MGP_NODShiLtJ_T0096510.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108501409 108506289 - MGP_NODShiLtJ_P0096510 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096511.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108501412 108507164 - MGP_NODShiLtJ_P0096511 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096512.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108501412 108506321 - MGP_NODShiLtJ_P0096512 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096513.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108501417 108506696 - MGP_NODShiLtJ_P0096513 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096514.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108501437 108506844 - MGP_NODShiLtJ_P0096514 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0096515.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108501494 108503853 - Zmym3 protein_coding retained_intron MGP_NODShiLtJ_T0096516.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108502666 108506309 - Zmym3 protein_coding processed_transcript MGP_NODShiLtJ_T0096517.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108502753 108504170 - Zmym3 protein_coding retained_intron MGP_NODShiLtJ_T0096518.1 MGP_NODShiLtJ_G0035739.1 mouse_genomes_project X 108502862 108506340 - MGP_NODShiLtJ_P0096518 Zmym3 protein_coding protein_coding MGP_NODShiLtJ_T0016546.1 MGP_NODShiLtJ_G0014654.1 mouse_genomes_project X 126556436 126556739 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095483.1 MGP_NODShiLtJ_G0035463.1 mouse_genomes_project X 39782723 39927701 + MGP_NODShiLtJ_P0095483 protein_coding protein_coding MGP_NODShiLtJ_T0095484.1 MGP_NODShiLtJ_G0035463.1 mouse_genomes_project X 39782817 39927691 + MGP_NODShiLtJ_P0095484 protein_coding protein_coding MGP_NODShiLtJ_T0095485.1 MGP_NODShiLtJ_G0035463.1 mouse_genomes_project X 39782946 39855672 + protein_coding retained_intron MGP_NODShiLtJ_T0095486.1 MGP_NODShiLtJ_G0035463.1 mouse_genomes_project X 39783088 39848200 + MGP_NODShiLtJ_P0095486 protein_coding protein_coding MGP_NODShiLtJ_T0095487.1 MGP_NODShiLtJ_G0035463.1 mouse_genomes_project X 39783559 39854411 + protein_coding processed_transcript MGP_NODShiLtJ_T0095488.1 MGP_NODShiLtJ_G0035463.1 mouse_genomes_project X 39783897 39927701 + MGP_NODShiLtJ_P0095488 protein_coding protein_coding MGP_NODShiLtJ_T0095489.1 MGP_NODShiLtJ_G0035463.1 mouse_genomes_project X 39784210 39848203 + MGP_NODShiLtJ_P0095489 protein_coding protein_coding MGP_NODShiLtJ_T0095490.1 MGP_NODShiLtJ_G0035463.1 mouse_genomes_project X 39785376 39865014 + MGP_NODShiLtJ_P0095490 protein_coding protein_coding MGP_NODShiLtJ_T0016393.1 MGP_NODShiLtJ_G0014501.1 mouse_genomes_project X 100044104 100044375 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011082.1 MGP_NODShiLtJ_G0009215.1 mouse_genomes_project X 105546509 105546607 - Gm27554 miRNA miRNA MGP_NODShiLtJ_T0011011.1 MGP_NODShiLtJ_G0009144.1 mouse_genomes_project X 8215878 8215972 - Gm25063 miRNA miRNA MGP_NODShiLtJ_T0011052.1 MGP_NODShiLtJ_G0009185.1 mouse_genomes_project X 68105262 68105333 - Mir741 miRNA miRNA MGP_NODShiLtJ_T0016209.1 MGP_NODShiLtJ_G0014317.1 mouse_genomes_project X 52649202 52649836 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016705.1 MGP_NODShiLtJ_G0014813.1 mouse_genomes_project X 167361555 167362081 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095431.1 MGP_NODShiLtJ_G0035453.1 mouse_genomes_project X 35323230 35379515 - MGP_NODShiLtJ_P0095431 Lamp2 protein_coding protein_coding MGP_NODShiLtJ_T0095432.1 MGP_NODShiLtJ_G0035453.1 mouse_genomes_project X 35326936 35379515 - MGP_NODShiLtJ_P0095432 Lamp2 protein_coding protein_coding MGP_NODShiLtJ_T0095433.1 MGP_NODShiLtJ_G0035453.1 mouse_genomes_project X 35339428 35379515 - MGP_NODShiLtJ_P0095433 Lamp2 protein_coding protein_coding MGP_NODShiLtJ_T0095434.1 MGP_NODShiLtJ_G0035453.1 mouse_genomes_project X 35349803 35366219 - Lamp2 protein_coding retained_intron MGP_NODShiLtJ_T0095435.1 MGP_NODShiLtJ_G0035453.1 mouse_genomes_project X 35375943 35379475 - Lamp2 protein_coding processed_transcript MGP_NODShiLtJ_T0098132.1 MGP_NODShiLtJ_G0036544.1 mouse_genomes_project X 114670960 114671065 + Gm23821 rRNA rRNA MGP_NODShiLtJ_T0095741.1 MGP_NODShiLtJ_G0035557.1 mouse_genomes_project X 69501099 69502686 - MGP_NODShiLtJ_P0095741 4933436I01Rik protein_coding protein_coding MGP_NODShiLtJ_T0016531.1 MGP_NODShiLtJ_G0014639.1 mouse_genomes_project X 123147254 123148605 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099706.1 MGP_NODShiLtJ_G0038100.1 mouse_genomes_project X 146980879 146980986 + Gm23124 snRNA snRNA MGP_NODShiLtJ_T0002430.1 MGP_NODShiLtJ_G0002339.1 mouse_genomes_project X 111050705 111055386 - TEC TEC MGP_NODShiLtJ_T0016650.1 MGP_NODShiLtJ_G0014758.1 mouse_genomes_project X 155439175 155440148 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096660.1 MGP_NODShiLtJ_G0035783.1 mouse_genomes_project X 113953063 113967059 - MGP_NODShiLtJ_P0096660 Taf9b protein_coding protein_coding MGP_NODShiLtJ_T0096661.1 MGP_NODShiLtJ_G0035783.1 mouse_genomes_project X 113953063 113965802 - MGP_NODShiLtJ_P0096661 Taf9b protein_coding protein_coding MGP_NODShiLtJ_T0096662.1 MGP_NODShiLtJ_G0035783.1 mouse_genomes_project X 113964240 113966651 - MGP_NODShiLtJ_P0096662 Taf9b protein_coding protein_coding MGP_NODShiLtJ_T0018471.1 MGP_NODShiLtJ_G0015645.1 mouse_genomes_project X 61344758 61349105 + C230004F18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018472.1 MGP_NODShiLtJ_G0015645.1 mouse_genomes_project X 61344758 61367849 + C230004F18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018473.1 MGP_NODShiLtJ_G0015645.1 mouse_genomes_project X 61344758 61406688 + C230004F18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018474.1 MGP_NODShiLtJ_G0015645.1 mouse_genomes_project X 61344758 61363281 + C230004F18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018475.1 MGP_NODShiLtJ_G0015645.1 mouse_genomes_project X 61344770 61406688 + C230004F18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0009341.1 MGP_NODShiLtJ_G0007483.1 mouse_genomes_project X 129919943 129921654 - Gm14929 lincRNA lincRNA MGP_NODShiLtJ_T0096856.1 MGP_NODShiLtJ_G0035855.1 mouse_genomes_project X 147282903 147295216 + MGP_NODShiLtJ_P0096856 protein_coding protein_coding MGP_NODShiLtJ_T0011674.1 MGP_NODShiLtJ_G0009807.1 mouse_genomes_project X 178869139 178869440 + Gm22257 misc_RNA misc_RNA MGP_NODShiLtJ_T0016108.1 MGP_NODShiLtJ_G0014216.1 mouse_genomes_project X 10970438 10970755 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097451.1 MGP_NODShiLtJ_G0036013.1 mouse_genomes_project X 178954419 178969878 + MGP_NODShiLtJ_P0097451 Rbbp7 protein_coding protein_coding MGP_NODShiLtJ_T0097452.1 MGP_NODShiLtJ_G0036013.1 mouse_genomes_project X 178954649 178973518 + MGP_NODShiLtJ_P0097452 Rbbp7 protein_coding protein_coding MGP_NODShiLtJ_T0097453.1 MGP_NODShiLtJ_G0036013.1 mouse_genomes_project X 178955049 178966213 + MGP_NODShiLtJ_P0097453 Rbbp7 protein_coding protein_coding MGP_NODShiLtJ_T0097454.1 MGP_NODShiLtJ_G0036013.1 mouse_genomes_project X 178968560 178973000 + MGP_NODShiLtJ_P0097454 Rbbp7 protein_coding protein_coding MGP_NODShiLtJ_T0011008.1 MGP_NODShiLtJ_G0009141.1 mouse_genomes_project X 1980495 1980563 - Mir188 miRNA miRNA MGP_NODShiLtJ_T0096841.1 MGP_NODShiLtJ_G0035852.1 mouse_genomes_project X 147196871 147207110 + MGP_NODShiLtJ_P0096841 Armcx4 protein_coding protein_coding MGP_NODShiLtJ_T0096704.1 MGP_NODShiLtJ_G0035799.1 mouse_genomes_project X 117435041 117504011 + MGP_NODShiLtJ_P0096704 Sh3bgrl protein_coding protein_coding MGP_NODShiLtJ_T0096705.1 MGP_NODShiLtJ_G0035799.1 mouse_genomes_project X 117435185 117544483 + Sh3bgrl protein_coding processed_transcript MGP_NODShiLtJ_T0096706.1 MGP_NODShiLtJ_G0035799.1 mouse_genomes_project X 117453775 117495876 + Sh3bgrl protein_coding processed_transcript MGP_NODShiLtJ_T0016765.1 MGP_NODShiLtJ_G0014873.1 mouse_genomes_project X 179523378 179523844 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016461.1 MGP_NODShiLtJ_G0014569.1 mouse_genomes_project X 110776030 110776454 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102253.1 MGP_NODShiLtJ_G0040419.1 mouse_genomes_project X 80815475 80951515 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0097073.1 MGP_NODShiLtJ_G0035927.1 mouse_genomes_project X 155443119 155444919 - Gm15294 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0097074.1 MGP_NODShiLtJ_G0035927.1 mouse_genomes_project X 155444188 155444554 - MGP_NODShiLtJ_P0097074 Gm15294 protein_coding protein_coding MGP_NODShiLtJ_T0096412.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884509 107255237 + Eda protein_coding retained_intron MGP_NODShiLtJ_T0096413.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884509 107367646 + MGP_NODShiLtJ_P0096413 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096414.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884509 107367644 + MGP_NODShiLtJ_P0096414 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096415.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884509 107367644 + MGP_NODShiLtJ_P0096415 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096416.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884509 107367643 + MGP_NODShiLtJ_P0096416 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096417.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884509 107367646 + MGP_NODShiLtJ_P0096417 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096418.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884509 107367643 + MGP_NODShiLtJ_P0096418 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096419.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884509 107367644 + MGP_NODShiLtJ_P0096419 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096420.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884684 107362696 + MGP_NODShiLtJ_P0096420 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096421.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 106884684 107364040 + MGP_NODShiLtJ_P0096421 Eda protein_coding protein_coding MGP_NODShiLtJ_T0096422.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 107350801 107361322 + Eda protein_coding processed_transcript MGP_NODShiLtJ_T0096423.1 MGP_NODShiLtJ_G0035717.1 mouse_genomes_project X 107354128 107361920 + Eda protein_coding processed_transcript MGP_NODShiLtJ_T0097177.1 MGP_NODShiLtJ_G0035950.1 mouse_genomes_project X 165084871 165120202 + MGP_NODShiLtJ_P0097177 Pfkfb1 protein_coding protein_coding MGP_NODShiLtJ_T0097178.1 MGP_NODShiLtJ_G0035950.1 mouse_genomes_project X 165084898 165114354 + Pfkfb1 protein_coding processed_transcript MGP_NODShiLtJ_T0097179.1 MGP_NODShiLtJ_G0035950.1 mouse_genomes_project X 165086563 165145717 + MGP_NODShiLtJ_P0097179 Pfkfb1 protein_coding protein_coding MGP_NODShiLtJ_T0097180.1 MGP_NODShiLtJ_G0035950.1 mouse_genomes_project X 165091121 165145717 + MGP_NODShiLtJ_P0097180 Pfkfb1 protein_coding protein_coding MGP_NODShiLtJ_T0097181.1 MGP_NODShiLtJ_G0035950.1 mouse_genomes_project X 165091251 165145696 + Pfkfb1 protein_coding retained_intron MGP_NODShiLtJ_T0097182.1 MGP_NODShiLtJ_G0035950.1 mouse_genomes_project X 165115355 165119725 + Pfkfb1 protein_coding processed_transcript MGP_NODShiLtJ_T0097183.1 MGP_NODShiLtJ_G0035950.1 mouse_genomes_project X 165120359 165143816 + Pfkfb1 protein_coding processed_transcript MGP_NODShiLtJ_T0016114.1 MGP_NODShiLtJ_G0014222.1 mouse_genomes_project X 12386032 12387207 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097128.1 MGP_NODShiLtJ_G0035941.1 mouse_genomes_project X 158581095 159084617 + MGP_NODShiLtJ_P0097128 Zcchc16 protein_coding protein_coding MGP_NODShiLtJ_T0097129.1 MGP_NODShiLtJ_G0035941.1 mouse_genomes_project X 159081706 159083464 + MGP_NODShiLtJ_P0097129 Zcchc16 protein_coding protein_coding MGP_NODShiLtJ_T0016452.1 MGP_NODShiLtJ_G0014560.1 mouse_genomes_project X 110383764 110385072 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016456.1 MGP_NODShiLtJ_G0014564.1 mouse_genomes_project X 110465824 110466030 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097475.1 MGP_NODShiLtJ_G0036019.1 mouse_genomes_project X 180072071 180073262 - MGP_NODShiLtJ_P0097475 Rnf138rt1 protein_coding protein_coding MGP_NODShiLtJ_T0097440.1 MGP_NODShiLtJ_G0036009.1 mouse_genomes_project X 177223138 177323156 + MGP_NODShiLtJ_P0097440 Scml2 protein_coding protein_coding MGP_NODShiLtJ_T0097441.1 MGP_NODShiLtJ_G0036009.1 mouse_genomes_project X 177303094 177307866 + Scml2 protein_coding processed_transcript MGP_NODShiLtJ_T0096279.1 MGP_NODShiLtJ_G0035677.1 mouse_genomes_project X 95166645 95169871 + MGP_NODShiLtJ_P0096279 4932429P05Rik protein_coding protein_coding MGP_NODShiLtJ_T0011097.1 MGP_NODShiLtJ_G0009230.1 mouse_genomes_project X 147284272 147284373 + Mir7093 miRNA miRNA MGP_NODShiLtJ_T0016224.1 MGP_NODShiLtJ_G0014332.1 mouse_genomes_project X 58117187 58117511 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005514.1 MGP_NODShiLtJ_G0004642.1 mouse_genomes_project X 5916567 5917805 - Gm14493 antisense antisense MGP_NODShiLtJ_T0016654.1 MGP_NODShiLtJ_G0014762.1 mouse_genomes_project X 155439846 155440102 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095368.1 MGP_NODShiLtJ_G0035422.1 mouse_genomes_project X 33602442 33636739 + MGP_NODShiLtJ_P0095368 Slc25a43 protein_coding protein_coding MGP_NODShiLtJ_T0095369.1 MGP_NODShiLtJ_G0035422.1 mouse_genomes_project X 33602494 33635822 + Slc25a43 protein_coding processed_transcript MGP_NODShiLtJ_T0095146.1 MGP_NODShiLtJ_G0035347.1 mouse_genomes_project X 4012450 4033293 + MGP_NODShiLtJ_P0095146 protein_coding protein_coding MGP_NODShiLtJ_T0009343.1 MGP_NODShiLtJ_G0007485.1 mouse_genomes_project X 146106445 146126495 + Gm26851 lincRNA lincRNA MGP_NODShiLtJ_T0016512.1 MGP_NODShiLtJ_G0014620.1 mouse_genomes_project X 118906760 118909166 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096237.1 MGP_NODShiLtJ_G0035663.1 mouse_genomes_project X 81813455 81815085 + MGP_NODShiLtJ_P0096237 Fam47c protein_coding protein_coding MGP_NODShiLtJ_T0016274.1 MGP_NODShiLtJ_G0014382.1 mouse_genomes_project X 69609291 69609594 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016608.1 MGP_NODShiLtJ_G0014716.1 mouse_genomes_project X 147371890 147372753 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016566.1 MGP_NODShiLtJ_G0014674.1 mouse_genomes_project X 130662229 130662683 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016162.1 MGP_NODShiLtJ_G0014270.1 mouse_genomes_project X 37975125 37975685 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096591.1 MGP_NODShiLtJ_G0035760.1 mouse_genomes_project X 110570370 110572835 - MGP_NODShiLtJ_P0096591 Nap1l2 protein_coding protein_coding MGP_NODShiLtJ_T0097089.1 MGP_NODShiLtJ_G0035935.1 mouse_genomes_project X 156996644 157120192 - MGP_NODShiLtJ_P0097089 Chrdl1 protein_coding protein_coding MGP_NODShiLtJ_T0097090.1 MGP_NODShiLtJ_G0035935.1 mouse_genomes_project X 156996654 157124387 - MGP_NODShiLtJ_P0097090 Chrdl1 protein_coding protein_coding MGP_NODShiLtJ_T0097091.1 MGP_NODShiLtJ_G0035935.1 mouse_genomes_project X 157008055 157123999 - MGP_NODShiLtJ_P0097091 Chrdl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097092.1 MGP_NODShiLtJ_G0035935.1 mouse_genomes_project X 157008063 157124309 - MGP_NODShiLtJ_P0097092 Chrdl1 protein_coding protein_coding MGP_NODShiLtJ_T0097093.1 MGP_NODShiLtJ_G0035935.1 mouse_genomes_project X 157008065 157124021 - MGP_NODShiLtJ_P0097093 Chrdl1 protein_coding protein_coding MGP_NODShiLtJ_T0102262.1 MGP_NODShiLtJ_G0040428.1 mouse_genomes_project X 97930166 97931210 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011653.1 MGP_NODShiLtJ_G0009786.1 mouse_genomes_project X 110913373 110913441 - Gm27733 misc_RNA misc_RNA MGP_NODShiLtJ_T0016715.1 MGP_NODShiLtJ_G0014823.1 mouse_genomes_project X 169906921 169908660 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011647.1 MGP_NODShiLtJ_G0009780.1 mouse_genomes_project X 67715031 67715296 + Gm23028 misc_RNA misc_RNA MGP_NODShiLtJ_T0016657.1 MGP_NODShiLtJ_G0014765.1 mouse_genomes_project X 155667357 155667717 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016637.1 MGP_NODShiLtJ_G0014745.1 mouse_genomes_project X 153057242 153058488 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016064.1 MGP_NODShiLtJ_G0014172.1 mouse_genomes_project X 2280577 2280991 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102280.1 MGP_NODShiLtJ_G0040446.1 mouse_genomes_project X 162218219 162218547 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100941.1 MGP_NODShiLtJ_G0039335.1 mouse_genomes_project X 51047900 51048017 + Gm22539 snoRNA snoRNA MGP_NODShiLtJ_T0097427.1 MGP_NODShiLtJ_G0036005.1 mouse_genomes_project X 176627477 176744065 - MGP_NODShiLtJ_P0097427 Ppef1 protein_coding protein_coding MGP_NODShiLtJ_T0097428.1 MGP_NODShiLtJ_G0036005.1 mouse_genomes_project X 176650051 176756603 - MGP_NODShiLtJ_P0097428 Ppef1 protein_coding protein_coding MGP_NODShiLtJ_T0097429.1 MGP_NODShiLtJ_G0036005.1 mouse_genomes_project X 176712626 176744029 - MGP_NODShiLtJ_P0097429 Ppef1 protein_coding protein_coding MGP_NODShiLtJ_T0100979.1 MGP_NODShiLtJ_G0039373.1 mouse_genomes_project X 165342654 165342782 - Gm24907 snoRNA snoRNA MGP_NODShiLtJ_T0016742.1 MGP_NODShiLtJ_G0014850.1 mouse_genomes_project X 174938461 174939179 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095835.1 MGP_NODShiLtJ_G0035584.1 mouse_genomes_project X 75251389 75278764 + MGP_NODShiLtJ_P0095835 Nsdhl protein_coding protein_coding MGP_NODShiLtJ_T0095836.1 MGP_NODShiLtJ_G0035584.1 mouse_genomes_project X 75263303 75273902 + Nsdhl protein_coding retained_intron MGP_NODShiLtJ_T0016272.1 MGP_NODShiLtJ_G0014380.1 mouse_genomes_project X 69186288 69190062 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016115.1 MGP_NODShiLtJ_G0014223.1 mouse_genomes_project X 13149432 13151765 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094962.1 MGP_NODShiLtJ_G0035306.1 mouse_genomes_project X 2324128 2341075 - MGP_NODShiLtJ_P0094962 Ppp1r3f protein_coding protein_coding MGP_NODShiLtJ_T0094963.1 MGP_NODShiLtJ_G0035306.1 mouse_genomes_project X 2325788 2341040 - MGP_NODShiLtJ_P0094963 Ppp1r3f protein_coding protein_coding MGP_NODShiLtJ_T0094964.1 MGP_NODShiLtJ_G0035306.1 mouse_genomes_project X 2326058 2331045 - Ppp1r3f protein_coding processed_transcript MGP_NODShiLtJ_T0094965.1 MGP_NODShiLtJ_G0035306.1 mouse_genomes_project X 2327079 2339635 - MGP_NODShiLtJ_P0094965 Ppp1r3f protein_coding protein_coding MGP_NODShiLtJ_T0094966.1 MGP_NODShiLtJ_G0035306.1 mouse_genomes_project X 2329077 2331076 - Ppp1r3f protein_coding processed_transcript MGP_NODShiLtJ_T0095620.1 MGP_NODShiLtJ_G0035507.1 mouse_genomes_project X 52209871 52259354 + MGP_NODShiLtJ_P0095620 Phf6 protein_coding protein_coding MGP_NODShiLtJ_T0095621.1 MGP_NODShiLtJ_G0035507.1 mouse_genomes_project X 52209874 52250996 + MGP_NODShiLtJ_P0095621 Phf6 protein_coding protein_coding MGP_NODShiLtJ_T0095730.1 MGP_NODShiLtJ_G0035549.1 mouse_genomes_project X 62953316 62954138 + MGP_NODShiLtJ_P0095730 4931400O07Rik protein_coding protein_coding MGP_NODShiLtJ_T0011663.1 MGP_NODShiLtJ_G0009796.1 mouse_genomes_project X 140722495 140722773 - Gm22225 misc_RNA misc_RNA MGP_NODShiLtJ_T0097009.1 MGP_NODShiLtJ_G0035907.1 mouse_genomes_project X 153065994 153141907 + MGP_NODShiLtJ_P0097009 Tbc1d8b protein_coding protein_coding MGP_NODShiLtJ_T0097012.1 MGP_NODShiLtJ_G0035907.1 mouse_genomes_project X 153122512 153132630 + Tbc1d8b protein_coding processed_transcript MGP_NODShiLtJ_T0016234.1 MGP_NODShiLtJ_G0014342.1 mouse_genomes_project X 60684515 60685346 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016544.1 MGP_NODShiLtJ_G0014652.1 mouse_genomes_project X 125269629 125270483 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016698.1 MGP_NODShiLtJ_G0014806.1 mouse_genomes_project X 165752790 165753175 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011017.1 MGP_NODShiLtJ_G0009150.1 mouse_genomes_project X 17175636 17175693 - Mir5617 miRNA miRNA MGP_NODShiLtJ_T0100955.1 MGP_NODShiLtJ_G0039349.1 mouse_genomes_project X 86146671 86146808 - Gm24706 snoRNA snoRNA MGP_NODShiLtJ_T0096474.1 MGP_NODShiLtJ_G0035732.1 mouse_genomes_project X 108326564 108332931 + MGP_NODShiLtJ_P0096474 Foxo4 protein_coding protein_coding MGP_NODShiLtJ_T0096475.1 MGP_NODShiLtJ_G0035732.1 mouse_genomes_project X 108326603 108328472 + Foxo4 protein_coding processed_transcript MGP_NODShiLtJ_T0096476.1 MGP_NODShiLtJ_G0035732.1 mouse_genomes_project X 108326857 108331270 + MGP_NODShiLtJ_P0096476 Foxo4 protein_coding protein_coding MGP_NODShiLtJ_T0016476.1 MGP_NODShiLtJ_G0014584.1 mouse_genomes_project X 111949346 111949811 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096597.1 MGP_NODShiLtJ_G0035766.1 mouse_genomes_project X 111191281 111323750 - MGP_NODShiLtJ_P0096597 Slc16a2 protein_coding protein_coding MGP_NODShiLtJ_T0096598.1 MGP_NODShiLtJ_G0035766.1 mouse_genomes_project X 111193736 111200340 - Slc16a2 protein_coding retained_intron MGP_NODShiLtJ_T0096599.1 MGP_NODShiLtJ_G0035766.1 mouse_genomes_project X 111200269 111227998 - Slc16a2 protein_coding processed_transcript MGP_NODShiLtJ_T0095559.1 MGP_NODShiLtJ_G0035484.1 mouse_genomes_project X 47511764 47519389 + Slc25a14 protein_coding processed_transcript MGP_NODShiLtJ_T0095560.1 MGP_NODShiLtJ_G0035484.1 mouse_genomes_project X 47511929 47552318 + MGP_NODShiLtJ_P0095560 Slc25a14 protein_coding protein_coding MGP_NODShiLtJ_T0095561.1 MGP_NODShiLtJ_G0035484.1 mouse_genomes_project X 47511929 47552318 + MGP_NODShiLtJ_P0095561 Slc25a14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095562.1 MGP_NODShiLtJ_G0035484.1 mouse_genomes_project X 47511929 47552318 + MGP_NODShiLtJ_P0095562 Slc25a14 protein_coding protein_coding MGP_NODShiLtJ_T0095563.1 MGP_NODShiLtJ_G0035484.1 mouse_genomes_project X 47512100 47542262 + Slc25a14 protein_coding processed_transcript MGP_NODShiLtJ_T0095564.1 MGP_NODShiLtJ_G0035484.1 mouse_genomes_project X 47512116 47552318 + MGP_NODShiLtJ_P0095564 Slc25a14 protein_coding protein_coding MGP_NODShiLtJ_T0095565.1 MGP_NODShiLtJ_G0035484.1 mouse_genomes_project X 47512171 47525118 + Slc25a14 protein_coding retained_intron MGP_NODShiLtJ_T0095566.1 MGP_NODShiLtJ_G0035484.1 mouse_genomes_project X 47512313 47552316 + MGP_NODShiLtJ_P0095566 Slc25a14 protein_coding protein_coding MGP_NODShiLtJ_T0095637.1 MGP_NODShiLtJ_G0035515.1 mouse_genomes_project X 52987326 52987727 + MGP_NODShiLtJ_P0095637 Cxx1c protein_coding protein_coding MGP_NODShiLtJ_T0016611.1 MGP_NODShiLtJ_G0014719.1 mouse_genomes_project X 147843925 147844671 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096949.1 MGP_NODShiLtJ_G0035886.1 mouse_genomes_project X 149610308 149630911 - MGP_NODShiLtJ_P0096949 Glra4 protein_coding protein_coding MGP_NODShiLtJ_T0096950.1 MGP_NODShiLtJ_G0035886.1 mouse_genomes_project X 149619644 149630911 - Glra4 protein_coding retained_intron MGP_NODShiLtJ_T0016145.1 MGP_NODShiLtJ_G0014253.1 mouse_genomes_project X 33149606 33150102 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098136.1 MGP_NODShiLtJ_G0036548.1 mouse_genomes_project X 167037609 167037759 + n-R5s15 rRNA rRNA MGP_NODShiLtJ_T0016422.1 MGP_NODShiLtJ_G0014530.1 mouse_genomes_project X 103766256 103767524 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016197.1 MGP_NODShiLtJ_G0014305.1 mouse_genomes_project X 49408538 49409542 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095352.1 MGP_NODShiLtJ_G0035415.1 mouse_genomes_project X 32940677 33002286 + MGP_NODShiLtJ_P0095352 Il13ra1 protein_coding protein_coding MGP_NODShiLtJ_T0016753.1 MGP_NODShiLtJ_G0014861.1 mouse_genomes_project X 176737084 176737214 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016757.1 MGP_NODShiLtJ_G0014865.1 mouse_genomes_project X 178758242 178758696 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016174.1 MGP_NODShiLtJ_G0014282.1 mouse_genomes_project X 41372883 41373055 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095796.1 MGP_NODShiLtJ_G0035570.1 mouse_genomes_project X 73563347 73642691 - MGP_NODShiLtJ_P0095796 Cd99l2 protein_coding protein_coding MGP_NODShiLtJ_T0095797.1 MGP_NODShiLtJ_G0035570.1 mouse_genomes_project X 73563347 73642691 - MGP_NODShiLtJ_P0095797 Cd99l2 protein_coding protein_coding MGP_NODShiLtJ_T0095798.1 MGP_NODShiLtJ_G0035570.1 mouse_genomes_project X 73563347 73642487 - MGP_NODShiLtJ_P0095798 Cd99l2 protein_coding protein_coding MGP_NODShiLtJ_T0095799.1 MGP_NODShiLtJ_G0035570.1 mouse_genomes_project X 73565909 73642691 - MGP_NODShiLtJ_P0095799 Cd99l2 protein_coding protein_coding MGP_NODShiLtJ_T0095800.1 MGP_NODShiLtJ_G0035570.1 mouse_genomes_project X 73583595 73642491 - Cd99l2 protein_coding retained_intron MGP_NODShiLtJ_T0095801.1 MGP_NODShiLtJ_G0035570.1 mouse_genomes_project X 73641740 73642447 - Cd99l2 protein_coding processed_transcript MGP_NODShiLtJ_T0095754.1 MGP_NODShiLtJ_G0035560.1 mouse_genomes_project X 70493683 70546573 + MGP_NODShiLtJ_P0095754 Fmr1nb protein_coding protein_coding MGP_NODShiLtJ_T0095755.1 MGP_NODShiLtJ_G0035560.1 mouse_genomes_project X 70493725 70546573 + MGP_NODShiLtJ_P0095755 Fmr1nb protein_coding protein_coding MGP_NODShiLtJ_T0095756.1 MGP_NODShiLtJ_G0035560.1 mouse_genomes_project X 70493778 70546573 + MGP_NODShiLtJ_P0095756 Fmr1nb protein_coding protein_coding MGP_NODShiLtJ_T0095757.1 MGP_NODShiLtJ_G0035560.1 mouse_genomes_project X 70495659 70546448 + MGP_NODShiLtJ_P0095757 Fmr1nb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096868.1 MGP_NODShiLtJ_G0035858.1 mouse_genomes_project X 147543041 147590158 - MGP_NODShiLtJ_P0096868 Zmat1 protein_coding protein_coding MGP_NODShiLtJ_T0096869.1 MGP_NODShiLtJ_G0035858.1 mouse_genomes_project X 147543044 147590182 - MGP_NODShiLtJ_P0096869 Zmat1 protein_coding protein_coding MGP_NODShiLtJ_T0096870.1 MGP_NODShiLtJ_G0035858.1 mouse_genomes_project X 147544446 147550163 - Zmat1 protein_coding retained_intron MGP_NODShiLtJ_T0095380.1 MGP_NODShiLtJ_G0035426.1 mouse_genomes_project X 33768860 33785116 - MGP_NODShiLtJ_P0095380 Nkrf protein_coding protein_coding MGP_NODShiLtJ_T0011102.1 MGP_NODShiLtJ_G0009235.1 mouse_genomes_project X 156427916 156428014 + Mir652 miRNA miRNA MGP_NODShiLtJ_T0095153.1 MGP_NODShiLtJ_G0035354.1 mouse_genomes_project X 4276135 4325534 + MGP_NODShiLtJ_P0095153 protein_coding protein_coding MGP_NODShiLtJ_T0016141.1 MGP_NODShiLtJ_G0014249.1 mouse_genomes_project X 20631614 20632830 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098164.1 MGP_NODShiLtJ_G0036576.1 mouse_genomes_project X 85866400 85866619 + Gm26174 ribozyme ribozyme MGP_NODShiLtJ_T0095772.1 MGP_NODShiLtJ_G0035567.1 mouse_genomes_project X 73147757 73269961 + MGP_NODShiLtJ_P0095772 Mamld1 protein_coding protein_coding MGP_NODShiLtJ_T0095773.1 MGP_NODShiLtJ_G0035567.1 mouse_genomes_project X 73147757 73271300 + MGP_NODShiLtJ_P0095773 Mamld1 protein_coding protein_coding MGP_NODShiLtJ_T0096712.1 MGP_NODShiLtJ_G0035805.1 mouse_genomes_project X 120137382 120212481 - MGP_NODShiLtJ_P0096712 protein_coding protein_coding MGP_NODShiLtJ_T0096713.1 MGP_NODShiLtJ_G0035805.1 mouse_genomes_project X 120137414 120190984 - MGP_NODShiLtJ_P0096713 protein_coding protein_coding MGP_NODShiLtJ_T0096714.1 MGP_NODShiLtJ_G0035805.1 mouse_genomes_project X 120138320 120282669 - MGP_NODShiLtJ_P0096714 protein_coding protein_coding MGP_NODShiLtJ_T0096715.1 MGP_NODShiLtJ_G0035805.1 mouse_genomes_project X 120145307 120189660 - MGP_NODShiLtJ_P0096715 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096716.1 MGP_NODShiLtJ_G0035805.1 mouse_genomes_project X 120145384 120290434 - MGP_NODShiLtJ_P0096716 protein_coding protein_coding MGP_NODShiLtJ_T0096717.1 MGP_NODShiLtJ_G0035805.1 mouse_genomes_project X 120158044 120290446 - MGP_NODShiLtJ_P0096717 protein_coding protein_coding MGP_NODShiLtJ_T0096718.1 MGP_NODShiLtJ_G0035805.1 mouse_genomes_project X 120172117 120288829 - MGP_NODShiLtJ_P0096718 protein_coding protein_coding MGP_NODShiLtJ_T0096919.1 MGP_NODShiLtJ_G0035879.1 mouse_genomes_project X 149092751 149094275 + MGP_NODShiLtJ_P0096919 Ngfrap1 protein_coding protein_coding MGP_NODShiLtJ_T0096920.1 MGP_NODShiLtJ_G0035879.1 mouse_genomes_project X 149092759 149094275 + MGP_NODShiLtJ_P0096920 Ngfrap1 protein_coding protein_coding MGP_NODShiLtJ_T0096921.1 MGP_NODShiLtJ_G0035879.1 mouse_genomes_project X 149092803 149094261 + MGP_NODShiLtJ_P0096921 Ngfrap1 protein_coding protein_coding MGP_NODShiLtJ_T0096922.1 MGP_NODShiLtJ_G0035879.1 mouse_genomes_project X 149093243 149094215 + MGP_NODShiLtJ_P0096922 Ngfrap1 protein_coding protein_coding MGP_NODShiLtJ_T0016490.1 MGP_NODShiLtJ_G0014598.1 mouse_genomes_project X 113914023 113914636 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095182.1 MGP_NODShiLtJ_G0035363.1 mouse_genomes_project X 5649813 5767541 + Tspan7 protein_coding retained_intron MGP_NODShiLtJ_T0095183.1 MGP_NODShiLtJ_G0035363.1 mouse_genomes_project X 5649813 5767541 + MGP_NODShiLtJ_P0095183 Tspan7 protein_coding protein_coding MGP_NODShiLtJ_T0095184.1 MGP_NODShiLtJ_G0035363.1 mouse_genomes_project X 5649813 5767541 + MGP_NODShiLtJ_P0095184 Tspan7 protein_coding protein_coding MGP_NODShiLtJ_T0011021.1 MGP_NODShiLtJ_G0009154.1 mouse_genomes_project X 35694378 35694444 - Gm25642 miRNA miRNA MGP_NODShiLtJ_T0016469.1 MGP_NODShiLtJ_G0014577.1 mouse_genomes_project X 111169964 111170283 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016166.1 MGP_NODShiLtJ_G0014274.1 mouse_genomes_project X 39244578 39244962 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098141.1 MGP_NODShiLtJ_G0036553.1 mouse_genomes_project X 180487317 180487438 + n-R5s18 rRNA rRNA MGP_NODShiLtJ_T0018509.1 MGP_NODShiLtJ_G0015657.1 mouse_genomes_project X 148179666 148256664 + processed_transcript processed_transcript MGP_NODShiLtJ_T0011029.1 MGP_NODShiLtJ_G0009162.1 mouse_genomes_project X 51992110 51992185 - Mir363 miRNA miRNA MGP_NODShiLtJ_T0005515.1 MGP_NODShiLtJ_G0004643.1 mouse_genomes_project X 33684219 33687134 + Gm14549 antisense antisense MGP_NODShiLtJ_T0095237.1 MGP_NODShiLtJ_G0035377.1 mouse_genomes_project X 12385817 12388494 + MGP_NODShiLtJ_P0095237 protein_coding protein_coding MGP_NODShiLtJ_T0016247.1 MGP_NODShiLtJ_G0014355.1 mouse_genomes_project X 62127466 62128118 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095116.1 MGP_NODShiLtJ_G0035338.1 mouse_genomes_project X 2996502 3018223 - MGP_NODShiLtJ_P0095116 Tbc1d25 protein_coding protein_coding MGP_NODShiLtJ_T0095117.1 MGP_NODShiLtJ_G0035338.1 mouse_genomes_project X 2996502 3018223 - MGP_NODShiLtJ_P0095117 Tbc1d25 protein_coding protein_coding MGP_NODShiLtJ_T0095118.1 MGP_NODShiLtJ_G0035338.1 mouse_genomes_project X 2996513 3018000 - Tbc1d25 protein_coding retained_intron MGP_NODShiLtJ_T0095119.1 MGP_NODShiLtJ_G0035338.1 mouse_genomes_project X 2996735 3017911 - MGP_NODShiLtJ_P0095119 Tbc1d25 protein_coding protein_coding MGP_NODShiLtJ_T0096367.1 MGP_NODShiLtJ_G0035704.1 mouse_genomes_project X 102717420 102753911 - MGP_NODShiLtJ_P0096367 Vsig4 protein_coding protein_coding MGP_NODShiLtJ_T0096368.1 MGP_NODShiLtJ_G0035704.1 mouse_genomes_project X 102720167 102753885 - Vsig4 protein_coding processed_transcript MGP_NODShiLtJ_T0095738.1 MGP_NODShiLtJ_G0035555.1 mouse_genomes_project X 67940753 67949511 + MGP_NODShiLtJ_P0095738 Slitrk2 protein_coding protein_coding MGP_NODShiLtJ_T0095739.1 MGP_NODShiLtJ_G0035555.1 mouse_genomes_project X 67944509 67947991 + MGP_NODShiLtJ_P0095739 Slitrk2 protein_coding protein_coding MGP_NODShiLtJ_T0096379.1 MGP_NODShiLtJ_G0035708.1 mouse_genomes_project X 103651565 103661064 + MGP_NODShiLtJ_P0096379 Pgr15l protein_coding protein_coding MGP_NODShiLtJ_T0096964.1 MGP_NODShiLtJ_G0035893.1 mouse_genomes_project X 149884389 149888099 + MGP_NODShiLtJ_P0096964 Zcchc18 protein_coding protein_coding MGP_NODShiLtJ_T0096965.1 MGP_NODShiLtJ_G0035893.1 mouse_genomes_project X 149884393 149887837 + MGP_NODShiLtJ_P0096965 Zcchc18 protein_coding protein_coding MGP_NODShiLtJ_T0096966.1 MGP_NODShiLtJ_G0035893.1 mouse_genomes_project X 149884532 149890193 + MGP_NODShiLtJ_P0096966 Zcchc18 protein_coding protein_coding MGP_NODShiLtJ_T0016584.1 MGP_NODShiLtJ_G0014692.1 mouse_genomes_project X 140962029 140963031 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016552.1 MGP_NODShiLtJ_G0014660.1 mouse_genomes_project X 127583094 127585085 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095700.1 MGP_NODShiLtJ_G0035538.1 mouse_genomes_project X 57908109 57916739 + MGP_NODShiLtJ_P0095700 Zic3 protein_coding protein_coding MGP_NODShiLtJ_T0095701.1 MGP_NODShiLtJ_G0035538.1 mouse_genomes_project X 57915936 57930121 + MGP_NODShiLtJ_P0095701 Zic3 protein_coding protein_coding MGP_NODShiLtJ_T0095702.1 MGP_NODShiLtJ_G0035538.1 mouse_genomes_project X 57916289 57930121 + MGP_NODShiLtJ_P0095702 Zic3 protein_coding protein_coding MGP_NODShiLtJ_T0095703.1 MGP_NODShiLtJ_G0035538.1 mouse_genomes_project X 57916300 57936951 + MGP_NODShiLtJ_P0095703 Zic3 protein_coding protein_coding MGP_NODShiLtJ_T0011045.1 MGP_NODShiLtJ_G0009178.1 mouse_genomes_project X 60519428 60519518 - Mir505 miRNA miRNA MGP_NODShiLtJ_T0016068.1 MGP_NODShiLtJ_G0014176.1 mouse_genomes_project X 2541777 2542062 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016063.1 MGP_NODShiLtJ_G0014171.1 mouse_genomes_project X 1869878 1870309 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096645.1 MGP_NODShiLtJ_G0035778.1 mouse_genomes_project X 113680541 113730563 - MGP_NODShiLtJ_P0096645 Magt1 protein_coding protein_coding MGP_NODShiLtJ_T0096646.1 MGP_NODShiLtJ_G0035778.1 mouse_genomes_project X 113680541 113730570 - MGP_NODShiLtJ_P0096646 Magt1 protein_coding protein_coding MGP_NODShiLtJ_T0096647.1 MGP_NODShiLtJ_G0035778.1 mouse_genomes_project X 113682899 113730450 - MGP_NODShiLtJ_P0096647 Magt1 protein_coding protein_coding MGP_NODShiLtJ_T0096648.1 MGP_NODShiLtJ_G0035778.1 mouse_genomes_project X 113690295 113730444 - MGP_NODShiLtJ_P0096648 Magt1 protein_coding protein_coding MGP_NODShiLtJ_T0096336.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101372910 101535588 - MGP_NODShiLtJ_P0096336 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096337.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101372913 101502844 - MGP_NODShiLtJ_P0096337 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096338.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101372919 101502946 - MGP_NODShiLtJ_P0096338 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096339.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101374241 101535919 - MGP_NODShiLtJ_P0096339 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096340.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101375499 101535907 - MGP_NODShiLtJ_P0096340 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096341.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101375530 101535942 - MGP_NODShiLtJ_P0096341 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096342.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101375579 101410749 - MGP_NODShiLtJ_P0096342 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096343.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101375894 101380489 - MGP_NODShiLtJ_P0096343 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096344.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101375895 101384856 - MGP_NODShiLtJ_P0096344 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096345.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101376031 101502057 - MGP_NODShiLtJ_P0096345 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096346.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101377780 101535591 - MGP_NODShiLtJ_P0096346 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096347.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101405502 101502285 - MGP_NODShiLtJ_P0096347 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096348.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101410588 101535538 - MGP_NODShiLtJ_P0096348 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096349.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101431360 101502999 - MGP_NODShiLtJ_P0096349 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0096350.1 MGP_NODShiLtJ_G0035697.1 mouse_genomes_project X 101443531 101502898 - MGP_NODShiLtJ_P0096350 Arhgef9 protein_coding protein_coding MGP_NODShiLtJ_T0011053.1 MGP_NODShiLtJ_G0009186.1 mouse_genomes_project X 68107613 68107688 - Mir463 miRNA miRNA MGP_NODShiLtJ_T0095460.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39357056 39513653 - MGP_NODShiLtJ_P0095460 protein_coding protein_coding MGP_NODShiLtJ_T0095461.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39357056 39390196 - MGP_NODShiLtJ_P0095461 protein_coding protein_coding MGP_NODShiLtJ_T0095462.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39359170 39390570 - MGP_NODShiLtJ_P0095462 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095463.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39359544 39375064 - MGP_NODShiLtJ_P0095463 protein_coding protein_coding MGP_NODShiLtJ_T0095464.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39370865 39375552 - MGP_NODShiLtJ_P0095464 protein_coding protein_coding MGP_NODShiLtJ_T0095465.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39370877 39375216 - MGP_NODShiLtJ_P0095465 protein_coding protein_coding MGP_NODShiLtJ_T0095466.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39372049 39389665 - protein_coding processed_transcript MGP_NODShiLtJ_T0095467.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39387011 39390272 - protein_coding retained_intron MGP_NODShiLtJ_T0095468.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39390147 39438482 - protein_coding processed_transcript MGP_NODShiLtJ_T0095469.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39390543 39408480 - protein_coding retained_intron MGP_NODShiLtJ_T0095470.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39400151 39408622 - protein_coding retained_intron MGP_NODShiLtJ_T0095471.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39462914 39523347 - MGP_NODShiLtJ_P0095471 protein_coding protein_coding MGP_NODShiLtJ_T0095472.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39462918 39499568 - MGP_NODShiLtJ_P0095472 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095473.1 MGP_NODShiLtJ_G0035461.1 mouse_genomes_project X 39482256 39501023 - protein_coding retained_intron MGP_NODShiLtJ_T0009293.1 MGP_NODShiLtJ_G0007453.1 mouse_genomes_project X 17702760 17731347 - Gm6938 lincRNA lincRNA MGP_NODShiLtJ_T0016653.1 MGP_NODShiLtJ_G0014761.1 mouse_genomes_project X 155439845 155440112 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016525.1 MGP_NODShiLtJ_G0014633.1 mouse_genomes_project X 121697974 121698449 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016297.1 MGP_NODShiLtJ_G0014405.1 mouse_genomes_project X 76495507 76496308 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096271.1 MGP_NODShiLtJ_G0035672.1 mouse_genomes_project X 90264943 90291608 + MGP_NODShiLtJ_P0096271 5430427O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0096186.1 MGP_NODShiLtJ_G0035641.1 mouse_genomes_project X 77862013 78084876 - MGP_NODShiLtJ_P0096186 protein_coding protein_coding MGP_NODShiLtJ_T0096187.1 MGP_NODShiLtJ_G0035641.1 mouse_genomes_project X 77862017 78082601 - MGP_NODShiLtJ_P0096187 protein_coding protein_coding MGP_NODShiLtJ_T0096188.1 MGP_NODShiLtJ_G0035641.1 mouse_genomes_project X 77929361 77972502 - MGP_NODShiLtJ_P0096188 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096189.1 MGP_NODShiLtJ_G0035641.1 mouse_genomes_project X 78025332 78085183 - MGP_NODShiLtJ_P0096189 protein_coding protein_coding MGP_NODShiLtJ_T0096190.1 MGP_NODShiLtJ_G0035641.1 mouse_genomes_project X 78059876 78084851 - MGP_NODShiLtJ_P0096190 protein_coding protein_coding MGP_NODShiLtJ_T0100978.1 MGP_NODShiLtJ_G0039372.1 mouse_genomes_project X 161943659 161943788 - Gm25107 snoRNA snoRNA MGP_NODShiLtJ_T0016435.1 MGP_NODShiLtJ_G0014543.1 mouse_genomes_project X 108116038 108116321 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016312.1 MGP_NODShiLtJ_G0014420.1 mouse_genomes_project X 78705650 78706962 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016237.1 MGP_NODShiLtJ_G0014345.1 mouse_genomes_project X 60849122 60849916 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097205.1 MGP_NODShiLtJ_G0035953.1 mouse_genomes_project X 165543408 165583071 - MGP_NODShiLtJ_P0097205 Gnl3l protein_coding protein_coding MGP_NODShiLtJ_T0097206.1 MGP_NODShiLtJ_G0035953.1 mouse_genomes_project X 165543408 165583071 - MGP_NODShiLtJ_P0097206 Gnl3l protein_coding protein_coding MGP_NODShiLtJ_T0097207.1 MGP_NODShiLtJ_G0035953.1 mouse_genomes_project X 165549481 165555582 - Gnl3l protein_coding retained_intron MGP_NODShiLtJ_T0097208.1 MGP_NODShiLtJ_G0035953.1 mouse_genomes_project X 165558524 165561313 - Gnl3l protein_coding retained_intron MGP_NODShiLtJ_T0097209.1 MGP_NODShiLtJ_G0035953.1 mouse_genomes_project X 165558894 165583071 - MGP_NODShiLtJ_P0097209 Gnl3l protein_coding protein_coding MGP_NODShiLtJ_T0097210.1 MGP_NODShiLtJ_G0035953.1 mouse_genomes_project X 165563742 165583071 - MGP_NODShiLtJ_P0097210 Gnl3l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097211.1 MGP_NODShiLtJ_G0035953.1 mouse_genomes_project X 165563786 165583071 - MGP_NODShiLtJ_P0097211 Gnl3l protein_coding protein_coding MGP_NODShiLtJ_T0096656.1 MGP_NODShiLtJ_G0035781.1 mouse_genomes_project X 113875434 113875853 + Tlr13 protein_coding retained_intron MGP_NODShiLtJ_T0096657.1 MGP_NODShiLtJ_G0035781.1 mouse_genomes_project X 113875459 113893863 + MGP_NODShiLtJ_P0096657 Tlr13 protein_coding protein_coding MGP_NODShiLtJ_T0101241.1 MGP_NODShiLtJ_G0039532.1 mouse_genomes_project X 149889762 149890058 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0016447.1 MGP_NODShiLtJ_G0014555.1 mouse_genomes_project X 109396235 109396592 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097291.1 MGP_NODShiLtJ_G0035966.1 mouse_genomes_project X 167075139 167100646 - MGP_NODShiLtJ_P0097291 Gpr173 protein_coding protein_coding MGP_NODShiLtJ_T0097292.1 MGP_NODShiLtJ_G0035966.1 mouse_genomes_project X 167098957 167100646 - Gpr173 protein_coding processed_transcript MGP_NODShiLtJ_T0016599.1 MGP_NODShiLtJ_G0014707.1 mouse_genomes_project X 145409595 145411218 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016411.1 MGP_NODShiLtJ_G0014519.1 mouse_genomes_project X 101557807 101559894 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096722.1 MGP_NODShiLtJ_G0035808.1 mouse_genomes_project X 121094929 121099735 + MGP_NODShiLtJ_P0096722 4933403O08Rik protein_coding protein_coding MGP_NODShiLtJ_T0096723.1 MGP_NODShiLtJ_G0035808.1 mouse_genomes_project X 121096356 121099735 + MGP_NODShiLtJ_P0096723 4933403O08Rik protein_coding protein_coding MGP_NODShiLtJ_T0096724.1 MGP_NODShiLtJ_G0035808.1 mouse_genomes_project X 121096465 121099662 + MGP_NODShiLtJ_P0096724 4933403O08Rik protein_coding protein_coding MGP_NODShiLtJ_T0096364.1 MGP_NODShiLtJ_G0035703.1 mouse_genomes_project X 102555127 102630295 + MGP_NODShiLtJ_P0096364 Msn protein_coding protein_coding MGP_NODShiLtJ_T0096365.1 MGP_NODShiLtJ_G0035703.1 mouse_genomes_project X 102555142 102614947 + Msn protein_coding processed_transcript MGP_NODShiLtJ_T0096366.1 MGP_NODShiLtJ_G0035703.1 mouse_genomes_project X 102555182 102612867 + Msn protein_coding processed_transcript MGP_NODShiLtJ_T0016470.1 MGP_NODShiLtJ_G0014578.1 mouse_genomes_project X 111174015 111174733 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016628.1 MGP_NODShiLtJ_G0014736.1 mouse_genomes_project X 150057778 150058534 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016101.1 MGP_NODShiLtJ_G0014209.1 mouse_genomes_project X 8634850 8636077 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016683.1 MGP_NODShiLtJ_G0014791.1 mouse_genomes_project X 160157427 160157794 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095698.1 MGP_NODShiLtJ_G0035536.1 mouse_genomes_project X 57261673 57348227 + MGP_NODShiLtJ_P0095698 Gm364 protein_coding protein_coding MGP_NODShiLtJ_T0002432.1 MGP_NODShiLtJ_G0002341.1 mouse_genomes_project X 139678449 139680313 + TEC TEC MGP_NODShiLtJ_T0095567.1 MGP_NODShiLtJ_G0035485.1 mouse_genomes_project X 47558001 47565475 - MGP_NODShiLtJ_P0095567 Gpr119 protein_coding protein_coding MGP_NODShiLtJ_T0095828.1 MGP_NODShiLtJ_G0035581.1 mouse_genomes_project X 74714923 74946266 - MGP_NODShiLtJ_P0095828 Gabra3 protein_coding protein_coding MGP_NODShiLtJ_T0095829.1 MGP_NODShiLtJ_G0035581.1 mouse_genomes_project X 74716817 74947273 - MGP_NODShiLtJ_P0095829 Gabra3 protein_coding protein_coding MGP_NODShiLtJ_T0011049.1 MGP_NODShiLtJ_G0009182.1 mouse_genomes_project X 68086732 68086797 - Mir742 miRNA miRNA MGP_NODShiLtJ_T0096822.1 MGP_NODShiLtJ_G0035845.1 mouse_genomes_project X 146942633 146960126 - MGP_NODShiLtJ_P0096822 Taf7l protein_coding protein_coding MGP_NODShiLtJ_T0096823.1 MGP_NODShiLtJ_G0035845.1 mouse_genomes_project X 146943073 146957514 - MGP_NODShiLtJ_P0096823 Taf7l protein_coding protein_coding MGP_NODShiLtJ_T0096824.1 MGP_NODShiLtJ_G0035845.1 mouse_genomes_project X 146952395 146957509 - Taf7l protein_coding processed_transcript MGP_NODShiLtJ_T0096227.1 MGP_NODShiLtJ_G0035657.1 mouse_genomes_project X 80815420 80952351 + MGP_NODShiLtJ_P0096227 protein_coding protein_coding MGP_NODShiLtJ_T0101215.1 MGP_NODShiLtJ_G0039515.1 mouse_genomes_project X 5543474 5545412 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101216.1 MGP_NODShiLtJ_G0039515.1 mouse_genomes_project X 5544816 5545307 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0018480.1 MGP_NODShiLtJ_G0015650.1 mouse_genomes_project X 109448004 109565237 + Gm14858 processed_transcript processed_transcript MGP_NODShiLtJ_T0018481.1 MGP_NODShiLtJ_G0015650.1 mouse_genomes_project X 109448133 109453516 + Gm14858 processed_transcript processed_transcript MGP_NODShiLtJ_T0097414.1 MGP_NODShiLtJ_G0036003.1 mouse_genomes_project X 176363930 176445041 + Adgrg2 protein_coding retained_intron MGP_NODShiLtJ_T0097415.1 MGP_NODShiLtJ_G0036003.1 mouse_genomes_project X 176363930 176454537 + MGP_NODShiLtJ_P0097415 Adgrg2 protein_coding protein_coding MGP_NODShiLtJ_T0097416.1 MGP_NODShiLtJ_G0036003.1 mouse_genomes_project X 176398685 176483108 + MGP_NODShiLtJ_P0097416 Adgrg2 protein_coding protein_coding MGP_NODShiLtJ_T0097417.1 MGP_NODShiLtJ_G0036003.1 mouse_genomes_project X 176407160 176483357 + MGP_NODShiLtJ_P0097417 Adgrg2 protein_coding protein_coding MGP_NODShiLtJ_T0096649.1 MGP_NODShiLtJ_G0035779.1 mouse_genomes_project X 113736864 113746038 + MGP_NODShiLtJ_P0096649 Cox7b protein_coding protein_coding MGP_NODShiLtJ_T0096650.1 MGP_NODShiLtJ_G0035779.1 mouse_genomes_project X 113736880 113737294 + Cox7b protein_coding processed_transcript MGP_NODShiLtJ_T0096651.1 MGP_NODShiLtJ_G0035779.1 mouse_genomes_project X 113742978 113745546 + Cox7b protein_coding retained_intron MGP_NODShiLtJ_T0016156.1 MGP_NODShiLtJ_G0014264.1 mouse_genomes_project X 36494416 36494823 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102249.1 MGP_NODShiLtJ_G0040415.1 mouse_genomes_project X 77508206 77508344 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102232.1 MGP_NODShiLtJ_G0040398.1 mouse_genomes_project X 3279513 3518243 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0097532.1 MGP_NODShiLtJ_G0036037.1 mouse_genomes_project X 182748550 182767598 + MGP_NODShiLtJ_P0097532 Gemin8 protein_coding protein_coding MGP_NODShiLtJ_T0097533.1 MGP_NODShiLtJ_G0036037.1 mouse_genomes_project X 182748550 182768306 + MGP_NODShiLtJ_P0097533 Gemin8 protein_coding protein_coding MGP_NODShiLtJ_T0097534.1 MGP_NODShiLtJ_G0036037.1 mouse_genomes_project X 182748588 182767614 + MGP_NODShiLtJ_P0097534 Gemin8 protein_coding protein_coding MGP_NODShiLtJ_T0097535.1 MGP_NODShiLtJ_G0036037.1 mouse_genomes_project X 182748591 182768304 + MGP_NODShiLtJ_P0097535 Gemin8 protein_coding protein_coding MGP_NODShiLtJ_T0097536.1 MGP_NODShiLtJ_G0036037.1 mouse_genomes_project X 182756215 182758581 + MGP_NODShiLtJ_P0097536 Gemin8 protein_coding protein_coding MGP_NODShiLtJ_T0097537.1 MGP_NODShiLtJ_G0036037.1 mouse_genomes_project X 182756237 182767136 + MGP_NODShiLtJ_P0097537 Gemin8 protein_coding protein_coding MGP_NODShiLtJ_T0096106.1 MGP_NODShiLtJ_G0035628.1 mouse_genomes_project X 76873020 76875339 - MGP_NODShiLtJ_P0096106 Lage3 protein_coding protein_coding MGP_NODShiLtJ_T0096107.1 MGP_NODShiLtJ_G0035628.1 mouse_genomes_project X 76873905 76875363 - MGP_NODShiLtJ_P0096107 Lage3 protein_coding protein_coding MGP_NODShiLtJ_T0096108.1 MGP_NODShiLtJ_G0035628.1 mouse_genomes_project X 76873906 76875320 - MGP_NODShiLtJ_P0096108 Lage3 protein_coding protein_coding MGP_NODShiLtJ_T0096804.1 MGP_NODShiLtJ_G0035841.1 mouse_genomes_project X 146693969 146750336 - MGP_NODShiLtJ_P0096804 Trmt2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096805.1 MGP_NODShiLtJ_G0035841.1 mouse_genomes_project X 146694725 146750336 - MGP_NODShiLtJ_P0096805 Trmt2b protein_coding protein_coding MGP_NODShiLtJ_T0096806.1 MGP_NODShiLtJ_G0035841.1 mouse_genomes_project X 146694726 146750281 - Trmt2b protein_coding retained_intron MGP_NODShiLtJ_T0096807.1 MGP_NODShiLtJ_G0035841.1 mouse_genomes_project X 146694730 146750274 - MGP_NODShiLtJ_P0096807 Trmt2b protein_coding protein_coding MGP_NODShiLtJ_T0096808.1 MGP_NODShiLtJ_G0035841.1 mouse_genomes_project X 146734791 146750338 - MGP_NODShiLtJ_P0096808 Trmt2b protein_coding protein_coding MGP_NODShiLtJ_T0096698.1 MGP_NODShiLtJ_G0035797.1 mouse_genomes_project X 117001815 117135009 - MGP_NODShiLtJ_P0096698 protein_coding protein_coding MGP_NODShiLtJ_T0096699.1 MGP_NODShiLtJ_G0035797.1 mouse_genomes_project X 117011266 117135033 - MGP_NODShiLtJ_P0096699 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096700.1 MGP_NODShiLtJ_G0035797.1 mouse_genomes_project X 117011266 117135033 - MGP_NODShiLtJ_P0096700 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096701.1 MGP_NODShiLtJ_G0035797.1 mouse_genomes_project X 117088506 117135001 - protein_coding retained_intron MGP_NODShiLtJ_T0096702.1 MGP_NODShiLtJ_G0035797.1 mouse_genomes_project X 117119737 117135007 - MGP_NODShiLtJ_P0096702 protein_coding protein_coding MGP_NODShiLtJ_T0016403.1 MGP_NODShiLtJ_G0014511.1 mouse_genomes_project X 100783404 100783813 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096596.1 MGP_NODShiLtJ_G0035765.1 mouse_genomes_project X 111109841 111110926 + MGP_NODShiLtJ_P0096596 Zcchc13 protein_coding protein_coding MGP_NODShiLtJ_T0016763.1 MGP_NODShiLtJ_G0014871.1 mouse_genomes_project X 179110155 179110555 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016152.1 MGP_NODShiLtJ_G0014260.1 mouse_genomes_project X 35841147 35842705 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016375.1 MGP_NODShiLtJ_G0014483.1 mouse_genomes_project X 94772577 94773085 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016535.1 MGP_NODShiLtJ_G0014643.1 mouse_genomes_project X 124050514 124050953 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016298.1 MGP_NODShiLtJ_G0014406.1 mouse_genomes_project X 76798426 76798642 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016281.1 MGP_NODShiLtJ_G0014389.1 mouse_genomes_project X 70517764 70517992 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016135.1 MGP_NODShiLtJ_G0014243.1 mouse_genomes_project X 18727032 18727386 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016440.1 MGP_NODShiLtJ_G0014548.1 mouse_genomes_project X 108896163 108896670 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016423.1 MGP_NODShiLtJ_G0014531.1 mouse_genomes_project X 104537926 104538653 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016085.1 MGP_NODShiLtJ_G0014193.1 mouse_genomes_project X 5871007 5871473 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097104.1 MGP_NODShiLtJ_G0035937.1 mouse_genomes_project X 157593260 157619281 - MGP_NODShiLtJ_P0097104 Capn6 protein_coding protein_coding MGP_NODShiLtJ_T0097105.1 MGP_NODShiLtJ_G0035937.1 mouse_genomes_project X 157607897 157619199 - Capn6 protein_coding retained_intron MGP_NODShiLtJ_T0096752.1 MGP_NODShiLtJ_G0035821.1 mouse_genomes_project X 128484085 128485115 - MGP_NODShiLtJ_P0096752 Tgif2lx1 protein_coding protein_coding MGP_NODShiLtJ_T0011117.1 MGP_NODShiLtJ_G0009250.1 mouse_genomes_project X 179087909 179087987 - Mir3473a miRNA miRNA MGP_NODShiLtJ_T0097513.1 MGP_NODShiLtJ_G0036031.1 mouse_genomes_project X 180811165 180834562 + MGP_NODShiLtJ_P0097513 Asb11 protein_coding protein_coding MGP_NODShiLtJ_T0097514.1 MGP_NODShiLtJ_G0036031.1 mouse_genomes_project X 180811181 180821169 + Asb11 protein_coding retained_intron MGP_NODShiLtJ_T0097515.1 MGP_NODShiLtJ_G0036031.1 mouse_genomes_project X 180812229 180834556 + MGP_NODShiLtJ_P0097515 Asb11 protein_coding protein_coding MGP_NODShiLtJ_T0099690.1 MGP_NODShiLtJ_G0038084.1 mouse_genomes_project X 109060642 109060737 - Gm25828 snRNA snRNA MGP_NODShiLtJ_T0011652.1 MGP_NODShiLtJ_G0009785.1 mouse_genomes_project X 107752539 107752867 + Gm22160 misc_RNA misc_RNA MGP_NODShiLtJ_T0096424.1 MGP_NODShiLtJ_G0035718.1 mouse_genomes_project X 107369669 107379415 - MGP_NODShiLtJ_P0096424 Awat2 protein_coding protein_coding MGP_NODShiLtJ_T0011042.1 MGP_NODShiLtJ_G0009175.1 mouse_genomes_project X 56361456 56361519 - Mir5116 miRNA miRNA MGP_NODShiLtJ_T0016327.1 MGP_NODShiLtJ_G0014435.1 mouse_genomes_project X 81389084 81389574 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099691.1 MGP_NODShiLtJ_G0038085.1 mouse_genomes_project X 111519354 111519461 - Gm23378 snRNA snRNA MGP_NODShiLtJ_T0016462.1 MGP_NODShiLtJ_G0014570.1 mouse_genomes_project X 110939508 110939963 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097286.1 MGP_NODShiLtJ_G0035965.1 mouse_genomes_project X 167068392 167073966 - Tspyl2 protein_coding retained_intron MGP_NODShiLtJ_T0097287.1 MGP_NODShiLtJ_G0035965.1 mouse_genomes_project X 167068392 167073966 - Tspyl2 protein_coding retained_intron MGP_NODShiLtJ_T0097288.1 MGP_NODShiLtJ_G0035965.1 mouse_genomes_project X 167068395 167073966 - MGP_NODShiLtJ_P0097288 Tspyl2 protein_coding protein_coding MGP_NODShiLtJ_T0097289.1 MGP_NODShiLtJ_G0035965.1 mouse_genomes_project X 167070841 167073385 - MGP_NODShiLtJ_P0097289 Tspyl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097290.1 MGP_NODShiLtJ_G0035965.1 mouse_genomes_project X 167071805 167073342 - Tspyl2 protein_coding retained_intron MGP_NODShiLtJ_T0016406.1 MGP_NODShiLtJ_G0014514.1 mouse_genomes_project X 100942892 100944510 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016720.1 MGP_NODShiLtJ_G0014828.1 mouse_genomes_project X 170711391 170711961 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016547.1 MGP_NODShiLtJ_G0014655.1 mouse_genomes_project X 126575048 126575438 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099687.1 MGP_NODShiLtJ_G0038081.1 mouse_genomes_project X 108061985 108062048 + Gm24577 snRNA snRNA MGP_NODShiLtJ_T0097578.1 MGP_NODShiLtJ_G0036048.1 mouse_genomes_project X 184098118 184855317 - MGP_NODShiLtJ_P0097578 Frmpd4 protein_coding protein_coding MGP_NODShiLtJ_T0097579.1 MGP_NODShiLtJ_G0036048.1 mouse_genomes_project X 184098118 185334804 - MGP_NODShiLtJ_P0097579 Frmpd4 protein_coding protein_coding MGP_NODShiLtJ_T0097580.1 MGP_NODShiLtJ_G0036048.1 mouse_genomes_project X 184098122 184595291 - MGP_NODShiLtJ_P0097580 Frmpd4 protein_coding protein_coding MGP_NODShiLtJ_T0097581.1 MGP_NODShiLtJ_G0036048.1 mouse_genomes_project X 184103303 184402546 - MGP_NODShiLtJ_P0097581 Frmpd4 protein_coding protein_coding MGP_NODShiLtJ_T0018465.1 MGP_NODShiLtJ_G0015643.1 mouse_genomes_project X 52369348 52371494 - C430049B03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018466.1 MGP_NODShiLtJ_G0015643.1 mouse_genomes_project X 52369509 52371464 - C430049B03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018467.1 MGP_NODShiLtJ_G0015643.1 mouse_genomes_project X 52370072 52371492 - C430049B03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018468.1 MGP_NODShiLtJ_G0015643.1 mouse_genomes_project X 52370496 52371494 - C430049B03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099701.1 MGP_NODShiLtJ_G0038095.1 mouse_genomes_project X 124749757 124749881 - Gm25366 snRNA snRNA MGP_NODShiLtJ_T0016747.1 MGP_NODShiLtJ_G0014855.1 mouse_genomes_project X 175964515 175964913 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095980.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76503498 76513499 - MGP_NODShiLtJ_P0095980 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095981.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76503502 76513496 - MGP_NODShiLtJ_P0095981 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095982.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76503510 76513496 - MGP_NODShiLtJ_P0095982 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095983.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76503510 76513496 - MGP_NODShiLtJ_P0095983 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095984.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76504384 76513407 - Irak1 protein_coding retained_intron MGP_NODShiLtJ_T0095985.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76504384 76513407 - Irak1 protein_coding retained_intron MGP_NODShiLtJ_T0095986.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76504549 76513494 - MGP_NODShiLtJ_P0095986 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095987.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76504936 76507913 - MGP_NODShiLtJ_P0095987 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095988.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76504950 76509520 - MGP_NODShiLtJ_P0095988 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095989.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76505018 76513326 - MGP_NODShiLtJ_P0095989 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095990.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76505018 76513326 - MGP_NODShiLtJ_P0095990 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095991.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76506126 76510567 - MGP_NODShiLtJ_P0095991 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095992.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76506708 76512075 - MGP_NODShiLtJ_P0095992 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095993.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76510578 76512230 - Irak1 protein_coding retained_intron MGP_NODShiLtJ_T0095994.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76510578 76512670 - MGP_NODShiLtJ_P0095994 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095995.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76511765 76512752 - MGP_NODShiLtJ_P0095995 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095996.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76511807 76512523 - MGP_NODShiLtJ_P0095996 Irak1 protein_coding protein_coding MGP_NODShiLtJ_T0095997.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76511816 76513308 - Irak1 protein_coding processed_transcript MGP_NODShiLtJ_T0095998.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76512196 76513389 - Irak1 protein_coding retained_intron MGP_NODShiLtJ_T0095999.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76512211 76512957 - Irak1 protein_coding retained_intron MGP_NODShiLtJ_T0096000.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76512324 76513089 - Irak1 protein_coding processed_transcript MGP_NODShiLtJ_T0096001.1 MGP_NODShiLtJ_G0035614.1 mouse_genomes_project X 76512673 76513412 - Irak1 protein_coding retained_intron MGP_NODShiLtJ_T0016212.1 MGP_NODShiLtJ_G0014320.1 mouse_genomes_project X 53148767 53148968 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016395.1 MGP_NODShiLtJ_G0014503.1 mouse_genomes_project X 100110267 100110769 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096356.1 MGP_NODShiLtJ_G0035701.1 mouse_genomes_project X 102118642 102348414 + Zc3h12b protein_coding processed_transcript MGP_NODShiLtJ_T0096357.1 MGP_NODShiLtJ_G0035701.1 mouse_genomes_project X 102315448 102351626 + MGP_NODShiLtJ_P0096357 Zc3h12b protein_coding protein_coding MGP_NODShiLtJ_T0096358.1 MGP_NODShiLtJ_G0035701.1 mouse_genomes_project X 102321960 102356293 + MGP_NODShiLtJ_P0096358 Zc3h12b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096871.1 MGP_NODShiLtJ_G0035859.1 mouse_genomes_project X 147921640 147937709 + MGP_NODShiLtJ_P0096871 protein_coding protein_coding MGP_NODShiLtJ_T0102279.1 MGP_NODShiLtJ_G0040445.1 mouse_genomes_project X 162205295 162207210 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016311.1 MGP_NODShiLtJ_G0014419.1 mouse_genomes_project X 78189011 78189409 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095185.1 MGP_NODShiLtJ_G0035364.1 mouse_genomes_project X 5914107 5915543 + Mid1ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0095186.1 MGP_NODShiLtJ_G0035364.1 mouse_genomes_project X 5914113 5917479 + MGP_NODShiLtJ_P0095186 Mid1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0095187.1 MGP_NODShiLtJ_G0035364.1 mouse_genomes_project X 5916484 5918785 + MGP_NODShiLtJ_P0095187 Mid1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0095188.1 MGP_NODShiLtJ_G0035364.1 mouse_genomes_project X 5916484 5918785 + MGP_NODShiLtJ_P0095188 Mid1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0095189.1 MGP_NODShiLtJ_G0035364.1 mouse_genomes_project X 5916562 5917479 + MGP_NODShiLtJ_P0095189 Mid1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0094943.1 MGP_NODShiLtJ_G0035298.1 mouse_genomes_project X 841132 851070 - MGP_NODShiLtJ_P0094943 Nudt10 protein_coding protein_coding MGP_NODShiLtJ_T0102265.1 MGP_NODShiLtJ_G0040431.1 mouse_genomes_project X 109970232 109972884 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011019.1 MGP_NODShiLtJ_G0009152.1 mouse_genomes_project X 33231525 33231662 - Gm44485 miRNA miRNA MGP_NODShiLtJ_T0016553.1 MGP_NODShiLtJ_G0014661.1 mouse_genomes_project X 127769864 127771965 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016633.1 MGP_NODShiLtJ_G0014741.1 mouse_genomes_project X 151940436 151943085 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016304.1 MGP_NODShiLtJ_G0014412.1 mouse_genomes_project X 77232188 77415751 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016685.1 MGP_NODShiLtJ_G0014793.1 mouse_genomes_project X 160739242 160739740 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095823.1 MGP_NODShiLtJ_G0035578.1 mouse_genomes_project X 74470176 74471124 + MGP_NODShiLtJ_P0095823 Magea4 protein_coding protein_coding MGP_NODShiLtJ_T0016183.1 MGP_NODShiLtJ_G0014291.1 mouse_genomes_project X 43977845 43980295 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016349.1 MGP_NODShiLtJ_G0014457.1 mouse_genomes_project X 89113120 89113432 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096593.1 MGP_NODShiLtJ_G0035762.1 mouse_genomes_project X 110794255 110836866 + MGP_NODShiLtJ_P0096593 Chic1 protein_coding protein_coding MGP_NODShiLtJ_T0016161.1 MGP_NODShiLtJ_G0014269.1 mouse_genomes_project X 37146094 37147546 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096762.1 MGP_NODShiLtJ_G0035825.1 mouse_genomes_project X 133063394 133066160 - MGP_NODShiLtJ_P0096762 Nap1l3 protein_coding protein_coding MGP_NODShiLtJ_T0102274.1 MGP_NODShiLtJ_G0040440.1 mouse_genomes_project X 114111328 114117697 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099677.1 MGP_NODShiLtJ_G0038071.1 mouse_genomes_project X 62329121 62329228 + Gm25412 snRNA snRNA MGP_NODShiLtJ_T0016594.1 MGP_NODShiLtJ_G0014702.1 mouse_genomes_project X 143822017 143824599 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100971.1 MGP_NODShiLtJ_G0039365.1 mouse_genomes_project X 144684818 144684942 + Gm26406 snoRNA snoRNA MGP_NODShiLtJ_T0016271.1 MGP_NODShiLtJ_G0014379.1 mouse_genomes_project X 68564417 68565035 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097268.1 MGP_NODShiLtJ_G0035962.1 mouse_genomes_project X 166726951 166746411 + MGP_NODShiLtJ_P0097268 Smc1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097269.1 MGP_NODShiLtJ_G0035962.1 mouse_genomes_project X 166726951 166777728 + MGP_NODShiLtJ_P0097269 Smc1a protein_coding protein_coding MGP_NODShiLtJ_T0097270.1 MGP_NODShiLtJ_G0035962.1 mouse_genomes_project X 166746645 166748257 + Smc1a protein_coding retained_intron MGP_NODShiLtJ_T0097271.1 MGP_NODShiLtJ_G0035962.1 mouse_genomes_project X 166761664 166762972 + Smc1a protein_coding retained_intron MGP_NODShiLtJ_T0097272.1 MGP_NODShiLtJ_G0035962.1 mouse_genomes_project X 166773500 166774542 + Smc1a protein_coding retained_intron MGP_NODShiLtJ_T0097273.1 MGP_NODShiLtJ_G0035962.1 mouse_genomes_project X 166774108 166774814 + Smc1a protein_coding retained_intron MGP_NODShiLtJ_T0095568.1 MGP_NODShiLtJ_G0035486.1 mouse_genomes_project X 47586520 47602079 + MGP_NODShiLtJ_P0095568 Rbmx2 protein_coding protein_coding MGP_NODShiLtJ_T0095569.1 MGP_NODShiLtJ_G0035486.1 mouse_genomes_project X 47597782 47600422 + Rbmx2 protein_coding processed_transcript MGP_NODShiLtJ_T0016508.1 MGP_NODShiLtJ_G0014616.1 mouse_genomes_project X 117325992 117326804 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102238.1 MGP_NODShiLtJ_G0040404.1 mouse_genomes_project X 34721948 34722958 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005556.1 MGP_NODShiLtJ_G0004676.1 mouse_genomes_project X 185836207 185918773 - Gm15261 antisense antisense MGP_NODShiLtJ_T0016451.1 MGP_NODShiLtJ_G0014559.1 mouse_genomes_project X 110376261 110376509 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005544.1 MGP_NODShiLtJ_G0004668.1 mouse_genomes_project X 155269561 155270887 + Gm15295 antisense antisense MGP_NODShiLtJ_T0011023.1 MGP_NODShiLtJ_G0009156.1 mouse_genomes_project X 39210849 39210934 + Gm22413 miRNA miRNA MGP_NODShiLtJ_T0016082.1 MGP_NODShiLtJ_G0014190.1 mouse_genomes_project X 4049753 4050585 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095165.1 MGP_NODShiLtJ_G0035359.1 mouse_genomes_project X 4945387 5073358 + MGP_NODShiLtJ_P0095165 Sytl5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095166.1 MGP_NODShiLtJ_G0035359.1 mouse_genomes_project X 4950504 5068488 + MGP_NODShiLtJ_P0095166 Sytl5 protein_coding protein_coding MGP_NODShiLtJ_T0095197.1 MGP_NODShiLtJ_G0035366.1 mouse_genomes_project X 7893990 7902771 + Atp6ap2 protein_coding retained_intron MGP_NODShiLtJ_T0095198.1 MGP_NODShiLtJ_G0035366.1 mouse_genomes_project X 7893990 7935099 + MGP_NODShiLtJ_P0095198 Atp6ap2 protein_coding protein_coding MGP_NODShiLtJ_T0009344.1 MGP_NODShiLtJ_G0007486.1 mouse_genomes_project X 153630237 153732767 - Gm15046 lincRNA lincRNA MGP_NODShiLtJ_T0100958.1 MGP_NODShiLtJ_G0039352.1 mouse_genomes_project X 99282517 99282650 + Gm23454 snoRNA snoRNA MGP_NODShiLtJ_T0016074.1 MGP_NODShiLtJ_G0014182.1 mouse_genomes_project X 3808721 3810194 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096826.1 MGP_NODShiLtJ_G0035847.1 mouse_genomes_project X 147023824 147025006 - MGP_NODShiLtJ_P0096826 Gm9797 protein_coding protein_coding MGP_NODShiLtJ_T0016257.1 MGP_NODShiLtJ_G0014365.1 mouse_genomes_project X 63647796 63648709 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016408.1 MGP_NODShiLtJ_G0014516.1 mouse_genomes_project X 101056802 101057502 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011660.1 MGP_NODShiLtJ_G0009793.1 mouse_genomes_project X 111100967 111101172 + Gm27321 misc_RNA misc_RNA MGP_NODShiLtJ_T0016644.1 MGP_NODShiLtJ_G0014752.1 mouse_genomes_project X 154733643 154734004 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097321.1 MGP_NODShiLtJ_G0035979.1 mouse_genomes_project X 168799939 168801225 + MGP_NODShiLtJ_P0097321 Spin2c protein_coding protein_coding MGP_NODShiLtJ_T0097322.1 MGP_NODShiLtJ_G0035979.1 mouse_genomes_project X 168799955 168801238 + MGP_NODShiLtJ_P0097322 Spin2c protein_coding protein_coding MGP_NODShiLtJ_T0097323.1 MGP_NODShiLtJ_G0035979.1 mouse_genomes_project X 168800007 168801958 + MGP_NODShiLtJ_P0097323 Spin2c protein_coding protein_coding MGP_NODShiLtJ_T0100968.1 MGP_NODShiLtJ_G0039362.1 mouse_genomes_project X 137924829 137924952 + Gm23586 snoRNA snoRNA MGP_NODShiLtJ_T0016622.1 MGP_NODShiLtJ_G0014730.1 mouse_genomes_project X 149767884 149768342 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016709.1 MGP_NODShiLtJ_G0014817.1 mouse_genomes_project X 168340379 168341360 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016213.1 MGP_NODShiLtJ_G0014321.1 mouse_genomes_project X 53158694 53158988 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095076.1 MGP_NODShiLtJ_G0035329.1 mouse_genomes_project X 2722692 2727278 + MGP_NODShiLtJ_P0095076 Pcsk1n protein_coding protein_coding MGP_NODShiLtJ_T0096273.1 MGP_NODShiLtJ_G0035674.1 mouse_genomes_project X 90647989 90656467 + MGP_NODShiLtJ_P0096273 Nr0b1 protein_coding protein_coding MGP_NODShiLtJ_T0016359.1 MGP_NODShiLtJ_G0014467.1 mouse_genomes_project X 90782284 90784038 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099688.1 MGP_NODShiLtJ_G0038082.1 mouse_genomes_project X 108062060 108062124 + Gm27510 snRNA snRNA MGP_NODShiLtJ_T0016507.1 MGP_NODShiLtJ_G0014615.1 mouse_genomes_project X 117208512 117208668 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016471.1 MGP_NODShiLtJ_G0014579.1 mouse_genomes_project X 111260509 111260995 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016296.1 MGP_NODShiLtJ_G0014404.1 mouse_genomes_project X 75814938 75817212 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096983.1 MGP_NODShiLtJ_G0035898.1 mouse_genomes_project X 151284965 151286381 - MGP_NODShiLtJ_P0096983 Tex13a protein_coding protein_coding MGP_NODShiLtJ_T0016752.1 MGP_NODShiLtJ_G0014860.1 mouse_genomes_project X 176736784 176737067 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096993.1 MGP_NODShiLtJ_G0035902.1 mouse_genomes_project X 152491446 152493228 + MGP_NODShiLtJ_P0096993 4933428M09Rik protein_coding protein_coding MGP_NODShiLtJ_T0095645.1 MGP_NODShiLtJ_G0035522.1 mouse_genomes_project X 56084432 56107318 + MGP_NODShiLtJ_P0095645 Zfp449 protein_coding protein_coding MGP_NODShiLtJ_T0095543.1 MGP_NODShiLtJ_G0035480.1 mouse_genomes_project X 47280483 47328429 - MGP_NODShiLtJ_P0095543 Elf4 protein_coding protein_coding MGP_NODShiLtJ_T0095544.1 MGP_NODShiLtJ_G0035480.1 mouse_genomes_project X 47280486 47337398 - MGP_NODShiLtJ_P0095544 Elf4 protein_coding protein_coding MGP_NODShiLtJ_T0095545.1 MGP_NODShiLtJ_G0035480.1 mouse_genomes_project X 47286089 47337398 - MGP_NODShiLtJ_P0095545 Elf4 protein_coding protein_coding MGP_NODShiLtJ_T0005516.1 MGP_NODShiLtJ_G0004644.1 mouse_genomes_project X 33793872 33795024 + Gm15008 antisense antisense MGP_NODShiLtJ_T0016222.1 MGP_NODShiLtJ_G0014330.1 mouse_genomes_project X 57607489 57608480 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016689.1 MGP_NODShiLtJ_G0014797.1 mouse_genomes_project X 161266158 161269679 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011115.1 MGP_NODShiLtJ_G0009248.1 mouse_genomes_project X 166618800 166618883 + Mirlet7f-2 miRNA miRNA MGP_NODShiLtJ_T0096430.1 MGP_NODShiLtJ_G0035722.1 mouse_genomes_project X 107561223 107568506 + MGP_NODShiLtJ_P0096430 Awat1 protein_coding protein_coding MGP_NODShiLtJ_T0096280.1 MGP_NODShiLtJ_G0035678.1 mouse_genomes_project X 95379926 95384982 - MGP_NODShiLtJ_P0096280 4930415L06Rik protein_coding protein_coding MGP_NODShiLtJ_T0016401.1 MGP_NODShiLtJ_G0014509.1 mouse_genomes_project X 100615979 100616597 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097327.1 MGP_NODShiLtJ_G0035983.1 mouse_genomes_project X 170070319 170072970 - MGP_NODShiLtJ_P0097327 protein_coding protein_coding MGP_NODShiLtJ_T0016697.1 MGP_NODShiLtJ_G0014805.1 mouse_genomes_project X 165743666 165744026 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099680.1 MGP_NODShiLtJ_G0038074.1 mouse_genomes_project X 77654575 77654682 - Gm25629 snRNA snRNA MGP_NODShiLtJ_T0011044.1 MGP_NODShiLtJ_G0009177.1 mouse_genomes_project X 59753719 59753819 - Gm44500 miRNA miRNA MGP_NODShiLtJ_T0011080.1 MGP_NODShiLtJ_G0009213.1 mouse_genomes_project X 100587120 100587230 - Gm44477 miRNA miRNA MGP_NODShiLtJ_T0096674.1 MGP_NODShiLtJ_G0035787.1 mouse_genomes_project X 114732321 114735888 - MGP_NODShiLtJ_P0096674 Zcchc5 protein_coding protein_coding MGP_NODShiLtJ_T0016402.1 MGP_NODShiLtJ_G0014510.1 mouse_genomes_project X 100773253 100773860 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097517.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181391400 181436020 - MGP_NODShiLtJ_P0097517 Mospd2 protein_coding protein_coding MGP_NODShiLtJ_T0097518.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181392464 181435942 - MGP_NODShiLtJ_P0097518 Mospd2 protein_coding protein_coding MGP_NODShiLtJ_T0097519.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181394355 181435980 - MGP_NODShiLtJ_P0097519 Mospd2 protein_coding protein_coding MGP_NODShiLtJ_T0097520.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181394701 181435868 - MGP_NODShiLtJ_P0097520 Mospd2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097521.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181411059 181435973 - Mospd2 protein_coding retained_intron MGP_NODShiLtJ_T0097522.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181411064 181435973 - Mospd2 protein_coding retained_intron MGP_NODShiLtJ_T0097523.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181416756 181435970 - Mospd2 protein_coding retained_intron MGP_NODShiLtJ_T0097524.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181420525 181435972 - Mospd2 protein_coding retained_intron MGP_NODShiLtJ_T0097525.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181420851 181435988 - Mospd2 protein_coding processed_transcript MGP_NODShiLtJ_T0097526.1 MGP_NODShiLtJ_G0036033.1 mouse_genomes_project X 181435305 181435967 - Mospd2 protein_coding retained_intron MGP_NODShiLtJ_T0016389.1 MGP_NODShiLtJ_G0014497.1 mouse_genomes_project X 98323950 98324126 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011054.1 MGP_NODShiLtJ_G0009187.1 mouse_genomes_project X 68108920 68108998 - Mir880 miRNA miRNA MGP_NODShiLtJ_T0016397.1 MGP_NODShiLtJ_G0014505.1 mouse_genomes_project X 100496025 100496973 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016448.1 MGP_NODShiLtJ_G0014556.1 mouse_genomes_project X 109858385 109859790 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096595.1 MGP_NODShiLtJ_G0035764.1 mouse_genomes_project X 110868875 110934283 + MGP_NODShiLtJ_P0096595 Gm26992 protein_coding protein_coding MGP_NODShiLtJ_T0016194.1 MGP_NODShiLtJ_G0014302.1 mouse_genomes_project X 48094046 48094446 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099704.1 MGP_NODShiLtJ_G0038098.1 mouse_genomes_project X 139075430 139075537 - Gm25061 snRNA snRNA MGP_NODShiLtJ_T0095401.1 MGP_NODShiLtJ_G0035438.1 mouse_genomes_project X 34546127 34588499 - MGP_NODShiLtJ_P0095401 protein_coding protein_coding MGP_NODShiLtJ_T0095370.1 MGP_NODShiLtJ_G0035423.1 mouse_genomes_project X 33659465 33660712 + protein_coding retained_intron MGP_NODShiLtJ_T0095167.1 MGP_NODShiLtJ_G0035360.1 mouse_genomes_project X 5112550 5206120 - MGP_NODShiLtJ_P0095167 Srpx protein_coding protein_coding MGP_NODShiLtJ_T0095168.1 MGP_NODShiLtJ_G0035360.1 mouse_genomes_project X 5113129 5206147 - MGP_NODShiLtJ_P0095168 Srpx protein_coding protein_coding MGP_NODShiLtJ_T0095169.1 MGP_NODShiLtJ_G0035360.1 mouse_genomes_project X 5113480 5206043 - MGP_NODShiLtJ_P0095169 Srpx protein_coding protein_coding MGP_NODShiLtJ_T0095170.1 MGP_NODShiLtJ_G0035360.1 mouse_genomes_project X 5155920 5206114 - Srpx protein_coding processed_transcript MGP_NODShiLtJ_T0016664.1 MGP_NODShiLtJ_G0014772.1 mouse_genomes_project X 156301981 156302392 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098133.1 MGP_NODShiLtJ_G0036545.1 mouse_genomes_project X 149099900 149100019 + n-R5s12 rRNA rRNA MGP_NODShiLtJ_T0097343.1 MGP_NODShiLtJ_G0035987.1 mouse_genomes_project X 170824280 170885053 - MGP_NODShiLtJ_P0097343 Ptchd1 protein_coding protein_coding MGP_NODShiLtJ_T0097344.1 MGP_NODShiLtJ_G0035987.1 mouse_genomes_project X 170824366 170884846 - MGP_NODShiLtJ_P0097344 Ptchd1 protein_coding protein_coding MGP_NODShiLtJ_T0097345.1 MGP_NODShiLtJ_G0035987.1 mouse_genomes_project X 170840396 170885506 - Ptchd1 protein_coding processed_transcript MGP_NODShiLtJ_T0095508.1 MGP_NODShiLtJ_G0035472.1 mouse_genomes_project X 46596615 46689660 - MGP_NODShiLtJ_P0095508 Smarca1 protein_coding protein_coding MGP_NODShiLtJ_T0095509.1 MGP_NODShiLtJ_G0035472.1 mouse_genomes_project X 46596617 46689660 - MGP_NODShiLtJ_P0095509 Smarca1 protein_coding protein_coding MGP_NODShiLtJ_T0095510.1 MGP_NODShiLtJ_G0035472.1 mouse_genomes_project X 46596880 46689693 - MGP_NODShiLtJ_P0095510 Smarca1 protein_coding protein_coding MGP_NODShiLtJ_T0095511.1 MGP_NODShiLtJ_G0035472.1 mouse_genomes_project X 46599445 46689537 - MGP_NODShiLtJ_P0095511 Smarca1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095512.1 MGP_NODShiLtJ_G0035472.1 mouse_genomes_project X 46635292 46689537 - MGP_NODShiLtJ_P0095512 Smarca1 protein_coding protein_coding MGP_NODShiLtJ_T0095513.1 MGP_NODShiLtJ_G0035472.1 mouse_genomes_project X 46684285 46690082 - MGP_NODShiLtJ_P0095513 Smarca1 protein_coding protein_coding MGP_NODShiLtJ_T0095514.1 MGP_NODShiLtJ_G0035472.1 mouse_genomes_project X 46686954 46690115 - Smarca1 protein_coding processed_transcript MGP_NODShiLtJ_T0097444.1 MGP_NODShiLtJ_G0036011.1 mouse_genomes_project X 177951785 178313857 - MGP_NODShiLtJ_P0097444 Nhs protein_coding protein_coding MGP_NODShiLtJ_T0097445.1 MGP_NODShiLtJ_G0036011.1 mouse_genomes_project X 177954851 178313515 - MGP_NODShiLtJ_P0097445 Nhs protein_coding protein_coding MGP_NODShiLtJ_T0016454.1 MGP_NODShiLtJ_G0014562.1 mouse_genomes_project X 110395916 110396429 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100944.1 MGP_NODShiLtJ_G0039338.1 mouse_genomes_project X 69090964 69091073 - Gm26276 snoRNA snoRNA MGP_NODShiLtJ_T0096815.1 MGP_NODShiLtJ_G0035844.1 mouse_genomes_project X 146883377 146939097 + MGP_NODShiLtJ_P0096815 Drp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096816.1 MGP_NODShiLtJ_G0035844.1 mouse_genomes_project X 146883614 146935226 + MGP_NODShiLtJ_P0096816 Drp2 protein_coding protein_coding MGP_NODShiLtJ_T0096817.1 MGP_NODShiLtJ_G0035844.1 mouse_genomes_project X 146883666 146939089 + MGP_NODShiLtJ_P0096817 Drp2 protein_coding protein_coding MGP_NODShiLtJ_T0096818.1 MGP_NODShiLtJ_G0035844.1 mouse_genomes_project X 146883666 146936132 + MGP_NODShiLtJ_P0096818 Drp2 protein_coding protein_coding MGP_NODShiLtJ_T0096819.1 MGP_NODShiLtJ_G0035844.1 mouse_genomes_project X 146883679 146935533 + MGP_NODShiLtJ_P0096819 Drp2 protein_coding protein_coding MGP_NODShiLtJ_T0096820.1 MGP_NODShiLtJ_G0035844.1 mouse_genomes_project X 146905051 146917941 + Drp2 protein_coding processed_transcript MGP_NODShiLtJ_T0096821.1 MGP_NODShiLtJ_G0035844.1 mouse_genomes_project X 146905105 146935926 + Drp2 protein_coding retained_intron MGP_NODShiLtJ_T0096383.1 MGP_NODShiLtJ_G0035710.1 mouse_genomes_project X 104895191 105106596 + MGP_NODShiLtJ_P0096383 Ar protein_coding protein_coding MGP_NODShiLtJ_T0016244.1 MGP_NODShiLtJ_G0014352.1 mouse_genomes_project X 61751355 61752198 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099669.1 MGP_NODShiLtJ_G0038063.1 mouse_genomes_project X 47166453 47166557 + Gm22528 snRNA snRNA MGP_NODShiLtJ_T0095150.1 MGP_NODShiLtJ_G0035351.1 mouse_genomes_project X 4077375 4079156 + MGP_NODShiLtJ_P0095150 4930402K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0095347.1 MGP_NODShiLtJ_G0035413.1 mouse_genomes_project X 20749860 20751093 - MGP_NODShiLtJ_P0095347 Gm4985 protein_coding protein_coding MGP_NODShiLtJ_T0011058.1 MGP_NODShiLtJ_G0009191.1 mouse_genomes_project X 68123022 68123097 - Mir470 miRNA miRNA MGP_NODShiLtJ_T0102273.1 MGP_NODShiLtJ_G0040439.1 mouse_genomes_project X 114078283 114082802 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095353.1 MGP_NODShiLtJ_G0035416.1 mouse_genomes_project X 33030861 33034582 + MGP_NODShiLtJ_P0095353 Zcchc12 protein_coding protein_coding MGP_NODShiLtJ_T0095354.1 MGP_NODShiLtJ_G0035416.1 mouse_genomes_project X 33030903 33034590 + MGP_NODShiLtJ_P0095354 Zcchc12 protein_coding protein_coding MGP_NODShiLtJ_T0095355.1 MGP_NODShiLtJ_G0035416.1 mouse_genomes_project X 33030916 33034589 + MGP_NODShiLtJ_P0095355 Zcchc12 protein_coding protein_coding MGP_NODShiLtJ_T0095356.1 MGP_NODShiLtJ_G0035416.1 mouse_genomes_project X 33030943 33034589 + MGP_NODShiLtJ_P0095356 Zcchc12 protein_coding protein_coding MGP_NODShiLtJ_T0096428.1 MGP_NODShiLtJ_G0035721.1 mouse_genomes_project X 107511304 107532683 + Dgat2l6 protein_coding retained_intron MGP_NODShiLtJ_T0096429.1 MGP_NODShiLtJ_G0035721.1 mouse_genomes_project X 107511307 107532936 + MGP_NODShiLtJ_P0096429 Dgat2l6 protein_coding protein_coding MGP_NODShiLtJ_T0097293.1 MGP_NODShiLtJ_G0035967.1 mouse_genomes_project X 167359625 167360261 + MGP_NODShiLtJ_P0097293 Cldn34a protein_coding protein_coding MGP_NODShiLtJ_T0097228.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166172148 166307186 + MGP_NODShiLtJ_P0097228 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097229.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166172148 166247299 + MGP_NODShiLtJ_P0097229 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097230.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166172148 166298952 + MGP_NODShiLtJ_P0097230 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097231.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166172645 166271493 + MGP_NODShiLtJ_P0097231 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097232.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166172657 166298952 + MGP_NODShiLtJ_P0097232 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097233.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166172663 166307188 + MGP_NODShiLtJ_P0097233 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097234.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166172663 166260934 + MGP_NODShiLtJ_P0097234 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097235.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166173836 166226788 + MGP_NODShiLtJ_P0097235 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097236.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166230055 166232279 + Phf8 protein_coding retained_intron MGP_NODShiLtJ_T0097237.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166242513 166252327 + MGP_NODShiLtJ_P0097237 Phf8 protein_coding protein_coding MGP_NODShiLtJ_T0097238.1 MGP_NODShiLtJ_G0035958.1 mouse_genomes_project X 166303145 166307188 + Phf8 protein_coding retained_intron MGP_NODShiLtJ_T0016770.1 MGP_NODShiLtJ_G0014878.1 mouse_genomes_project X 180840487 180843159 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101242.1 MGP_NODShiLtJ_G0039533.1 mouse_genomes_project X 164690683 164703581 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101243.1 MGP_NODShiLtJ_G0039533.1 mouse_genomes_project X 164693618 164700895 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0099694.1 MGP_NODShiLtJ_G0038088.1 mouse_genomes_project X 113560693 113560805 + Gm23656 snRNA snRNA MGP_NODShiLtJ_T0011094.1 MGP_NODShiLtJ_G0009227.1 mouse_genomes_project X 122023039 122023109 - Mir361 miRNA miRNA MGP_NODShiLtJ_T0016649.1 MGP_NODShiLtJ_G0014757.1 mouse_genomes_project X 155327377 155327860 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016562.1 MGP_NODShiLtJ_G0014670.1 mouse_genomes_project X 130194392 130195682 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100945.1 MGP_NODShiLtJ_G0039339.1 mouse_genomes_project X 70249932 70250058 + Gm22332 snoRNA snoRNA MGP_NODShiLtJ_T0016722.1 MGP_NODShiLtJ_G0014830.1 mouse_genomes_project X 171243565 171244472 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016609.1 MGP_NODShiLtJ_G0014717.1 mouse_genomes_project X 147371891 147372753 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002435.1 MGP_NODShiLtJ_G0002344.1 mouse_genomes_project X 167028677 167030153 - TEC TEC MGP_NODShiLtJ_T0016590.1 MGP_NODShiLtJ_G0014698.1 mouse_genomes_project X 142240906 142241348 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009349.1 MGP_NODShiLtJ_G0007490.1 mouse_genomes_project X 165396143 165396684 - Gm27191 lincRNA lincRNA MGP_NODShiLtJ_T0016366.1 MGP_NODShiLtJ_G0014474.1 mouse_genomes_project X 93593076 93593387 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011041.1 MGP_NODShiLtJ_G0009174.1 mouse_genomes_project X 52368556 52368651 - Mir322 miRNA miRNA MGP_NODShiLtJ_T0098125.1 MGP_NODShiLtJ_G0036537.1 mouse_genomes_project X 70718331 70718452 - n-R5s7 rRNA rRNA MGP_NODShiLtJ_T0016310.1 MGP_NODShiLtJ_G0014418.1 mouse_genomes_project X 78166922 78167570 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097195.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165341165 165349123 - MGP_NODShiLtJ_P0097195 Maged2 protein_coding protein_coding MGP_NODShiLtJ_T0097196.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165341216 165347746 - Maged2 protein_coding retained_intron MGP_NODShiLtJ_T0097197.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165341216 165348485 - MGP_NODShiLtJ_P0097197 Maged2 protein_coding protein_coding MGP_NODShiLtJ_T0097198.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165341219 165349047 - MGP_NODShiLtJ_P0097198 Maged2 protein_coding protein_coding MGP_NODShiLtJ_T0097199.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165341512 165347493 - MGP_NODShiLtJ_P0097199 Maged2 protein_coding protein_coding MGP_NODShiLtJ_T0097200.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165345653 165347856 - MGP_NODShiLtJ_P0097200 Maged2 protein_coding protein_coding MGP_NODShiLtJ_T0097201.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165345670 165347932 - MGP_NODShiLtJ_P0097201 Maged2 protein_coding protein_coding MGP_NODShiLtJ_T0097202.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165345879 165347241 - Maged2 protein_coding processed_transcript MGP_NODShiLtJ_T0097203.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165345917 165349059 - MGP_NODShiLtJ_P0097203 Maged2 protein_coding protein_coding MGP_NODShiLtJ_T0097204.1 MGP_NODShiLtJ_G0035952.1 mouse_genomes_project X 165346654 165347736 - MGP_NODShiLtJ_P0097204 Maged2 protein_coding protein_coding MGP_NODShiLtJ_T0016703.1 MGP_NODShiLtJ_G0014811.1 mouse_genomes_project X 166465505 166465892 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016168.1 MGP_NODShiLtJ_G0014276.1 mouse_genomes_project X 39519088 39519754 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096038.1 MGP_NODShiLtJ_G0035621.1 mouse_genomes_project X 76786883 76790184 + protein_coding processed_transcript MGP_NODShiLtJ_T0096039.1 MGP_NODShiLtJ_G0035621.1 mouse_genomes_project X 76786981 76789644 + protein_coding retained_intron MGP_NODShiLtJ_T0096040.1 MGP_NODShiLtJ_G0035621.1 mouse_genomes_project X 76787011 76790346 + protein_coding retained_intron MGP_NODShiLtJ_T0096041.1 MGP_NODShiLtJ_G0035621.1 mouse_genomes_project X 76787434 76790462 + protein_coding retained_intron MGP_NODShiLtJ_T0096042.1 MGP_NODShiLtJ_G0035621.1 mouse_genomes_project X 76787467 76789664 + protein_coding retained_intron MGP_NODShiLtJ_T0096043.1 MGP_NODShiLtJ_G0035621.1 mouse_genomes_project X 76787768 76789834 + protein_coding retained_intron MGP_NODShiLtJ_T0096044.1 MGP_NODShiLtJ_G0035621.1 mouse_genomes_project X 76787862 76790227 + protein_coding retained_intron MGP_NODShiLtJ_T0005545.1 MGP_NODShiLtJ_G0004669.1 mouse_genomes_project X 165917614 165974938 - A230072E10Rik antisense antisense MGP_NODShiLtJ_T0005546.1 MGP_NODShiLtJ_G0004669.1 mouse_genomes_project X 165918864 165938628 - A230072E10Rik antisense antisense MGP_NODShiLtJ_T0005547.1 MGP_NODShiLtJ_G0004669.1 mouse_genomes_project X 165918864 165924931 - A230072E10Rik antisense antisense MGP_NODShiLtJ_T0005548.1 MGP_NODShiLtJ_G0004669.1 mouse_genomes_project X 165940555 165971971 - A230072E10Rik antisense antisense MGP_NODShiLtJ_T0018479.1 MGP_NODShiLtJ_G0015649.1 mouse_genomes_project X 108370022 108395515 + Gm21986 processed_transcript processed_transcript MGP_NODShiLtJ_T0096444.1 MGP_NODShiLtJ_G0035726.1 mouse_genomes_project X 107622808 107728615 + MGP_NODShiLtJ_P0096444 Kif4 protein_coding protein_coding MGP_NODShiLtJ_T0096445.1 MGP_NODShiLtJ_G0035726.1 mouse_genomes_project X 107631200 107633548 + Kif4 protein_coding retained_intron MGP_NODShiLtJ_T0096446.1 MGP_NODShiLtJ_G0035726.1 mouse_genomes_project X 107712600 107726051 + Kif4 protein_coding processed_transcript MGP_NODShiLtJ_T0018444.1 MGP_NODShiLtJ_G0015637.1 mouse_genomes_project X 8098955 8164424 + Gm14634 processed_transcript processed_transcript MGP_NODShiLtJ_T0018445.1 MGP_NODShiLtJ_G0015637.1 mouse_genomes_project X 8099221 8161151 + Gm14634 processed_transcript processed_transcript MGP_NODShiLtJ_T0095409.1 MGP_NODShiLtJ_G0035444.1 mouse_genomes_project X 34873689 34886937 - protein_coding unprocessed_pseudogene MGP_NODShiLtJ_T0095413.1 MGP_NODShiLtJ_G0035444.1 mouse_genomes_project X 34874392 34886937 - MGP_NODShiLtJ_P0095413 protein_coding protein_coding MGP_NODShiLtJ_T0096154.1 MGP_NODShiLtJ_G0035636.1 mouse_genomes_project X 77197510 77207185 - MGP_NODShiLtJ_P0096154 Gm5936 protein_coding protein_coding MGP_NODShiLtJ_T0016593.1 MGP_NODShiLtJ_G0014701.1 mouse_genomes_project X 143458523 143460912 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097309.1 MGP_NODShiLtJ_G0035974.1 mouse_genomes_project X 168163165 168306891 + MGP_NODShiLtJ_P0097309 Klf8 protein_coding protein_coding MGP_NODShiLtJ_T0097310.1 MGP_NODShiLtJ_G0035974.1 mouse_genomes_project X 168163447 168331731 + MGP_NODShiLtJ_P0097310 Klf8 protein_coding protein_coding MGP_NODShiLtJ_T0097311.1 MGP_NODShiLtJ_G0035974.1 mouse_genomes_project X 168294559 168331396 + MGP_NODShiLtJ_P0097311 Klf8 protein_coding protein_coding MGP_NODShiLtJ_T0011033.1 MGP_NODShiLtJ_G0009166.1 mouse_genomes_project X 51992748 51992831 - Mir18b miRNA miRNA MGP_NODShiLtJ_T0099674.1 MGP_NODShiLtJ_G0038068.1 mouse_genomes_project X 58286949 58287056 - Gm25851 snRNA snRNA MGP_NODShiLtJ_T0016388.1 MGP_NODShiLtJ_G0014496.1 mouse_genomes_project X 97698073 97700315 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100942.1 MGP_NODShiLtJ_G0039336.1 mouse_genomes_project X 57243245 57243316 - Snord61 snoRNA snoRNA MGP_NODShiLtJ_T0096352.1 MGP_NODShiLtJ_G0035699.1 mouse_genomes_project X 101847103 101854752 - MGP_NODShiLtJ_P0096352 Asb12 protein_coding protein_coding MGP_NODShiLtJ_T0016442.1 MGP_NODShiLtJ_G0014550.1 mouse_genomes_project X 108917817 108918697 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016499.1 MGP_NODShiLtJ_G0014607.1 mouse_genomes_project X 115120964 115121849 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016356.1 MGP_NODShiLtJ_G0014464.1 mouse_genomes_project X 90173531 90173968 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016455.1 MGP_NODShiLtJ_G0014563.1 mouse_genomes_project X 110420585 110421330 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005526.1 MGP_NODShiLtJ_G0004653.1 mouse_genomes_project X 71220839 71225513 - Gm14705 antisense antisense MGP_NODShiLtJ_T0005527.1 MGP_NODShiLtJ_G0004653.1 mouse_genomes_project X 71222201 71224585 - Gm14705 antisense antisense MGP_NODShiLtJ_T0096827.1 MGP_NODShiLtJ_G0035848.1 mouse_genomes_project X 147032350 147079869 - MGP_NODShiLtJ_P0096827 Btk protein_coding protein_coding MGP_NODShiLtJ_T0096828.1 MGP_NODShiLtJ_G0035848.1 mouse_genomes_project X 147032384 147079857 - MGP_NODShiLtJ_P0096828 Btk protein_coding protein_coding MGP_NODShiLtJ_T0096829.1 MGP_NODShiLtJ_G0035848.1 mouse_genomes_project X 147040264 147079869 - Btk protein_coding retained_intron MGP_NODShiLtJ_T0096830.1 MGP_NODShiLtJ_G0035848.1 mouse_genomes_project X 147063247 147079202 - Btk protein_coding processed_transcript MGP_NODShiLtJ_T0096831.1 MGP_NODShiLtJ_G0035848.1 mouse_genomes_project X 147068431 147080299 - Btk protein_coding processed_transcript MGP_NODShiLtJ_T0005536.1 MGP_NODShiLtJ_G0004662.1 mouse_genomes_project X 101848350 101938504 + antisense antisense MGP_NODShiLtJ_T0016656.1 MGP_NODShiLtJ_G0014764.1 mouse_genomes_project X 155627893 155628151 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095393.1 MGP_NODShiLtJ_G0035431.1 mouse_genomes_project X 34016369 34040393 + MGP_NODShiLtJ_P0095393 Nkap protein_coding protein_coding MGP_NODShiLtJ_T0095394.1 MGP_NODShiLtJ_G0035431.1 mouse_genomes_project X 34025923 34031273 + Nkap protein_coding retained_intron MGP_NODShiLtJ_T0011090.1 MGP_NODShiLtJ_G0009223.1 mouse_genomes_project X 111644696 111644796 - Mir672 miRNA miRNA MGP_NODShiLtJ_T0099724.1 MGP_NODShiLtJ_G0038118.1 mouse_genomes_project X 185339338 185339450 - Gm23197 snRNA snRNA MGP_NODShiLtJ_T0097312.1 MGP_NODShiLtJ_G0035975.1 mouse_genomes_project X 168446745 168450090 + MGP_NODShiLtJ_P0097312 Ubqln2 protein_coding protein_coding MGP_NODShiLtJ_T0095295.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17098737 17173008 + MGP_NODShiLtJ_P0095295 Araf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095296.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17160104 17173030 + MGP_NODShiLtJ_P0095296 Araf protein_coding protein_coding MGP_NODShiLtJ_T0095297.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17160125 17168021 + Araf protein_coding retained_intron MGP_NODShiLtJ_T0095298.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17160127 17164268 + MGP_NODShiLtJ_P0095298 Araf protein_coding protein_coding MGP_NODShiLtJ_T0095299.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17160136 17165924 + Araf protein_coding processed_transcript MGP_NODShiLtJ_T0095300.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17160139 17164253 + MGP_NODShiLtJ_P0095300 Araf protein_coding protein_coding MGP_NODShiLtJ_T0095301.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17160143 17163081 + Araf protein_coding retained_intron MGP_NODShiLtJ_T0095302.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17160150 17164814 + MGP_NODShiLtJ_P0095302 Araf protein_coding protein_coding MGP_NODShiLtJ_T0095303.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17162493 17163578 + Araf protein_coding retained_intron MGP_NODShiLtJ_T0095304.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17164781 17174378 + MGP_NODShiLtJ_P0095304 Araf protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095305.1 MGP_NODShiLtJ_G0035396.1 mouse_genomes_project X 17170233 17172719 + MGP_NODShiLtJ_P0095305 Araf protein_coding protein_coding MGP_NODShiLtJ_T0097490.1 MGP_NODShiLtJ_G0036024.1 mouse_genomes_project X 180412065 180421771 - MGP_NODShiLtJ_P0097490 protein_coding protein_coding MGP_NODShiLtJ_T0097491.1 MGP_NODShiLtJ_G0036024.1 mouse_genomes_project X 180412065 180421800 - MGP_NODShiLtJ_P0097491 protein_coding protein_coding MGP_NODShiLtJ_T0097492.1 MGP_NODShiLtJ_G0036024.1 mouse_genomes_project X 180417536 180422143 - MGP_NODShiLtJ_P0097492 protein_coding protein_coding MGP_NODShiLtJ_T0096768.1 MGP_NODShiLtJ_G0035831.1 mouse_genomes_project X 141214799 142116479 + MGP_NODShiLtJ_P0096768 protein_coding protein_coding MGP_NODShiLtJ_T0096769.1 MGP_NODShiLtJ_G0035831.1 mouse_genomes_project X 141214853 141957200 + protein_coding retained_intron MGP_NODShiLtJ_T0096770.1 MGP_NODShiLtJ_G0035831.1 mouse_genomes_project X 141214862 142111871 + MGP_NODShiLtJ_P0096770 protein_coding protein_coding MGP_NODShiLtJ_T0096771.1 MGP_NODShiLtJ_G0035831.1 mouse_genomes_project X 141214881 141956873 + protein_coding retained_intron MGP_NODShiLtJ_T0096772.1 MGP_NODShiLtJ_G0035831.1 mouse_genomes_project X 141215033 142116482 + MGP_NODShiLtJ_P0096772 protein_coding protein_coding MGP_NODShiLtJ_T0011072.1 MGP_NODShiLtJ_G0009205.1 mouse_genomes_project X 75318441 75318507 + Mir2137 miRNA miRNA MGP_NODShiLtJ_T0096707.1 MGP_NODShiLtJ_G0035800.1 mouse_genomes_project X 117541450 117545188 + MGP_NODShiLtJ_P0096707 protein_coding protein_coding MGP_NODShiLtJ_T0016106.1 MGP_NODShiLtJ_G0014214.1 mouse_genomes_project X 9768913 9769779 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016439.1 MGP_NODShiLtJ_G0014547.1 mouse_genomes_project X 108833459 108833985 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018503.1 MGP_NODShiLtJ_G0015653.1 mouse_genomes_project X 146344211 146346722 - 4930570D08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016394.1 MGP_NODShiLtJ_G0014502.1 mouse_genomes_project X 100102097 100103737 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095244.1 MGP_NODShiLtJ_G0035381.1 mouse_genomes_project X 13005678 13219565 - MGP_NODShiLtJ_P0095244 Efhc2 protein_coding protein_coding MGP_NODShiLtJ_T0101226.1 MGP_NODShiLtJ_G0039522.1 mouse_genomes_project X 75199068 75199967 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101227.1 MGP_NODShiLtJ_G0039522.1 mouse_genomes_project X 75199068 75199800 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0005531.1 MGP_NODShiLtJ_G0004657.1 mouse_genomes_project X 78278267 78278975 + Gm15384 antisense antisense MGP_NODShiLtJ_T0016217.1 MGP_NODShiLtJ_G0014325.1 mouse_genomes_project X 55466468 55467348 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095774.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73326800 73433423 + MGP_NODShiLtJ_P0095774 Mtm1 protein_coding protein_coding MGP_NODShiLtJ_T0095775.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73330979 73433423 + MGP_NODShiLtJ_P0095775 Mtm1 protein_coding protein_coding MGP_NODShiLtJ_T0095776.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73330979 73433423 + MGP_NODShiLtJ_P0095776 Mtm1 protein_coding protein_coding MGP_NODShiLtJ_T0095777.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73330979 73375245 + MGP_NODShiLtJ_P0095777 Mtm1 protein_coding protein_coding MGP_NODShiLtJ_T0095778.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73331001 73433416 + MGP_NODShiLtJ_P0095778 Mtm1 protein_coding protein_coding MGP_NODShiLtJ_T0095779.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73331004 73416146 + Mtm1 protein_coding retained_intron MGP_NODShiLtJ_T0095780.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73331009 73414867 + Mtm1 protein_coding retained_intron MGP_NODShiLtJ_T0095781.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73331012 73433393 + MGP_NODShiLtJ_P0095781 Mtm1 protein_coding protein_coding MGP_NODShiLtJ_T0095782.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73331032 73428441 + Mtm1 protein_coding retained_intron MGP_NODShiLtJ_T0095783.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73331055 73433393 + MGP_NODShiLtJ_P0095783 Mtm1 protein_coding protein_coding MGP_NODShiLtJ_T0095784.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73331058 73352625 + Mtm1 protein_coding retained_intron MGP_NODShiLtJ_T0095785.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73331058 73370174 + Mtm1 protein_coding retained_intron MGP_NODShiLtJ_T0095786.1 MGP_NODShiLtJ_G0035568.1 mouse_genomes_project X 73418653 73433819 + Mtm1 protein_coding retained_intron MGP_NODShiLtJ_T0016660.1 MGP_NODShiLtJ_G0014768.1 mouse_genomes_project X 156063245 156063736 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016362.1 MGP_NODShiLtJ_G0014470.1 mouse_genomes_project X 92617463 92618341 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009338.1 MGP_NODShiLtJ_G0007480.1 mouse_genomes_project X 121894706 121926321 - Gm14936 lincRNA lincRNA MGP_NODShiLtJ_T0095390.1 MGP_NODShiLtJ_G0035430.1 mouse_genomes_project X 33981174 33999640 - MGP_NODShiLtJ_P0095390 Upf3b protein_coding protein_coding MGP_NODShiLtJ_T0095391.1 MGP_NODShiLtJ_G0035430.1 mouse_genomes_project X 33985172 33993883 - MGP_NODShiLtJ_P0095391 Upf3b protein_coding protein_coding MGP_NODShiLtJ_T0095392.1 MGP_NODShiLtJ_G0035430.1 mouse_genomes_project X 33986946 33999640 - Upf3b protein_coding processed_transcript MGP_NODShiLtJ_T0096765.1 MGP_NODShiLtJ_G0035828.1 mouse_genomes_project X 138494372 138495978 + MGP_NODShiLtJ_P0096765 4921511C20Rik protein_coding protein_coding MGP_NODShiLtJ_T0099719.1 MGP_NODShiLtJ_G0038113.1 mouse_genomes_project X 178268385 178268489 + Gm23794 snRNA snRNA MGP_NODShiLtJ_T0100975.1 MGP_NODShiLtJ_G0039369.1 mouse_genomes_project X 156148521 156148647 - Gm25915 snoRNA snoRNA MGP_NODShiLtJ_T0011070.1 MGP_NODShiLtJ_G0009203.1 mouse_genomes_project X 74879888 74879995 - Mir767 miRNA miRNA MGP_NODShiLtJ_T0095843.1 MGP_NODShiLtJ_G0035587.1 mouse_genomes_project X 75397478 75400900 + MGP_NODShiLtJ_P0095843 Pnma3 protein_coding protein_coding MGP_NODShiLtJ_T0016687.1 MGP_NODShiLtJ_G0014795.1 mouse_genomes_project X 160927850 160928327 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096754.1 MGP_NODShiLtJ_G0035823.1 mouse_genomes_project X 130567157 131324832 + MGP_NODShiLtJ_P0096754 Pcdh11x protein_coding protein_coding MGP_NODShiLtJ_T0096755.1 MGP_NODShiLtJ_G0035823.1 mouse_genomes_project X 130567157 131324832 + MGP_NODShiLtJ_P0096755 Pcdh11x protein_coding protein_coding MGP_NODShiLtJ_T0096756.1 MGP_NODShiLtJ_G0035823.1 mouse_genomes_project X 130567225 130569370 + Pcdh11x protein_coding retained_intron MGP_NODShiLtJ_T0096757.1 MGP_NODShiLtJ_G0035823.1 mouse_genomes_project X 130567301 131324832 + MGP_NODShiLtJ_P0096757 Pcdh11x protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096759.1 MGP_NODShiLtJ_G0035823.1 mouse_genomes_project X 130654038 130702396 + MGP_NODShiLtJ_P0096759 Pcdh11x protein_coding protein_coding MGP_NODShiLtJ_T0096760.1 MGP_NODShiLtJ_G0035823.1 mouse_genomes_project X 130695534 131324832 + MGP_NODShiLtJ_P0096760 Pcdh11x protein_coding protein_coding MGP_NODShiLtJ_T0096761.1 MGP_NODShiLtJ_G0035823.1 mouse_genomes_project X 130695534 131324830 + MGP_NODShiLtJ_P0096761 Pcdh11x protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094960.1 MGP_NODShiLtJ_G0035305.1 mouse_genomes_project X 2125940 2130475 - MGP_NODShiLtJ_P0094960 Usp27x protein_coding protein_coding MGP_NODShiLtJ_T0094961.1 MGP_NODShiLtJ_G0035305.1 mouse_genomes_project X 2127257 2130479 - MGP_NODShiLtJ_P0094961 Usp27x protein_coding protein_coding MGP_NODShiLtJ_T0095097.1 MGP_NODShiLtJ_G0035335.1 mouse_genomes_project X 2915899 2927077 - MGP_NODShiLtJ_P0095097 Was protein_coding protein_coding MGP_NODShiLtJ_T0095098.1 MGP_NODShiLtJ_G0035335.1 mouse_genomes_project X 2922970 2925344 - Was protein_coding retained_intron MGP_NODShiLtJ_T0095762.1 MGP_NODShiLtJ_G0035562.1 mouse_genomes_project X 71908832 71909511 + MGP_NODShiLtJ_P0095762 Gm6812 protein_coding protein_coding MGP_NODShiLtJ_T0016662.1 MGP_NODShiLtJ_G0014770.1 mouse_genomes_project X 156085335 156085545 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095235.1 MGP_NODShiLtJ_G0035376.1 mouse_genomes_project X 12285141 12285962 + MGP_NODShiLtJ_P0095235 Cypt1 protein_coding protein_coding MGP_NODShiLtJ_T0095236.1 MGP_NODShiLtJ_G0035376.1 mouse_genomes_project X 12285144 12285961 + MGP_NODShiLtJ_P0095236 Cypt1 protein_coding protein_coding MGP_NODShiLtJ_T0016385.1 MGP_NODShiLtJ_G0014493.1 mouse_genomes_project X 97322511 97323460 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016278.1 MGP_NODShiLtJ_G0014386.1 mouse_genomes_project X 70307377 70307725 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096084.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76824906 76833817 + MGP_NODShiLtJ_P0096084 Gdi1 protein_coding protein_coding MGP_NODShiLtJ_T0096085.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76824920 76833815 + Gdi1 protein_coding retained_intron MGP_NODShiLtJ_T0096086.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76825164 76828796 + Gdi1 protein_coding processed_transcript MGP_NODShiLtJ_T0096087.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76825175 76833813 + Gdi1 protein_coding retained_intron MGP_NODShiLtJ_T0096088.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76825221 76828933 + MGP_NODShiLtJ_P0096088 Gdi1 protein_coding protein_coding MGP_NODShiLtJ_T0096089.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76825736 76828974 + Gdi1 protein_coding processed_transcript MGP_NODShiLtJ_T0096090.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76828937 76831514 + Gdi1 protein_coding retained_intron MGP_NODShiLtJ_T0096091.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76830944 76833103 + MGP_NODShiLtJ_P0096091 Gdi1 protein_coding protein_coding MGP_NODShiLtJ_T0096092.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76831798 76832883 + Gdi1 protein_coding processed_transcript MGP_NODShiLtJ_T0096093.1 MGP_NODShiLtJ_G0035625.1 mouse_genomes_project X 76832327 76832980 + Gdi1 protein_coding processed_transcript MGP_NODShiLtJ_T0100943.1 MGP_NODShiLtJ_G0039337.1 mouse_genomes_project X 65326983 65327057 + Gm24598 snoRNA snoRNA MGP_NODShiLtJ_T0095016.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2521005 2540429 - MGP_NODShiLtJ_P0095016 Ccdc120 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095017.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2521014 2530622 - MGP_NODShiLtJ_P0095017 Ccdc120 protein_coding protein_coding MGP_NODShiLtJ_T0095018.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2527244 2529491 - MGP_NODShiLtJ_P0095018 Ccdc120 protein_coding protein_coding MGP_NODShiLtJ_T0095019.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2527500 2530589 - Ccdc120 protein_coding processed_transcript MGP_NODShiLtJ_T0095020.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2527514 2529512 - Ccdc120 protein_coding processed_transcript MGP_NODShiLtJ_T0095021.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2527525 2530605 - Ccdc120 protein_coding processed_transcript MGP_NODShiLtJ_T0095022.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2527652 2529488 - Ccdc120 protein_coding processed_transcript MGP_NODShiLtJ_T0095023.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2527742 2540553 - Ccdc120 protein_coding processed_transcript MGP_NODShiLtJ_T0095024.1 MGP_NODShiLtJ_G0035318.1 mouse_genomes_project X 2527795 2540545 - Ccdc120 protein_coding processed_transcript MGP_NODShiLtJ_T0100985.1 MGP_NODShiLtJ_G0039379.1 mouse_genomes_project X 174146624 174146775 + Gm22522 snoRNA snoRNA MGP_NODShiLtJ_T0016265.1 MGP_NODShiLtJ_G0014373.1 mouse_genomes_project X 67133727 67135855 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016762.1 MGP_NODShiLtJ_G0014870.1 mouse_genomes_project X 179051025 179051467 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098135.1 MGP_NODShiLtJ_G0036547.1 mouse_genomes_project X 166691401 166691508 + n-R5s14 rRNA rRNA MGP_NODShiLtJ_T0095844.1 MGP_NODShiLtJ_G0035588.1 mouse_genomes_project X 75426004 75436521 - MGP_NODShiLtJ_P0095844 protein_coding protein_coding MGP_NODShiLtJ_T0011669.1 MGP_NODShiLtJ_G0009802.1 mouse_genomes_project X 153032607 153032931 - Gm24380 misc_RNA misc_RNA MGP_NODShiLtJ_T0016775.1 MGP_NODShiLtJ_G0014883.1 mouse_genomes_project X 182783590 182783989 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016464.1 MGP_NODShiLtJ_G0014572.1 mouse_genomes_project X 110963452 110964230 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016636.1 MGP_NODShiLtJ_G0014744.1 mouse_genomes_project X 152702132 152703918 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011677.1 MGP_NODShiLtJ_G0009810.1 mouse_genomes_project X 186125782 186125951 + Gm27980 misc_RNA misc_RNA MGP_NODShiLtJ_T0016318.1 MGP_NODShiLtJ_G0014426.1 mouse_genomes_project X 79800910 79801165 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095654.1 MGP_NODShiLtJ_G0035525.1 mouse_genomes_project X 56359116 56371674 - MGP_NODShiLtJ_P0095654 Mmgt1 protein_coding protein_coding MGP_NODShiLtJ_T0016404.1 MGP_NODShiLtJ_G0014512.1 mouse_genomes_project X 100839732 100840210 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095306.1 MGP_NODShiLtJ_G0035397.1 mouse_genomes_project X 17173021 17244018 - MGP_NODShiLtJ_P0095306 Syn1 protein_coding protein_coding MGP_NODShiLtJ_T0095307.1 MGP_NODShiLtJ_G0035397.1 mouse_genomes_project X 17173025 17243932 - MGP_NODShiLtJ_P0095307 Syn1 protein_coding protein_coding MGP_NODShiLtJ_T0095332.1 MGP_NODShiLtJ_G0035406.1 mouse_genomes_project X 17525347 17534944 - MGP_NODShiLtJ_P0095332 Gm21876 protein_coding protein_coding MGP_NODShiLtJ_T0016604.1 MGP_NODShiLtJ_G0014712.1 mouse_genomes_project X 147102573 147103751 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098123.1 MGP_NODShiLtJ_G0036535.1 mouse_genomes_project X 18160801 18160880 + Gm25553 rRNA rRNA MGP_NODShiLtJ_T0095758.1 MGP_NODShiLtJ_G0035561.1 mouse_genomes_project X 71224537 71816737 + MGP_NODShiLtJ_P0095758 Aff2 protein_coding protein_coding MGP_NODShiLtJ_T0095759.1 MGP_NODShiLtJ_G0035561.1 mouse_genomes_project X 71224748 71442746 + Aff2 protein_coding processed_transcript MGP_NODShiLtJ_T0095760.1 MGP_NODShiLtJ_G0035561.1 mouse_genomes_project X 71224943 71713482 + Aff2 protein_coding processed_transcript MGP_NODShiLtJ_T0095761.1 MGP_NODShiLtJ_G0035561.1 mouse_genomes_project X 71805377 71815476 + Aff2 protein_coding retained_intron MGP_NODShiLtJ_T0096283.1 MGP_NODShiLtJ_G0035681.1 mouse_genomes_project X 97955085 97956656 - MGP_NODShiLtJ_P0096283 Mageb18 protein_coding protein_coding MGP_NODShiLtJ_T0095655.1 MGP_NODShiLtJ_G0035526.1 mouse_genomes_project X 56383362 56409316 + MGP_NODShiLtJ_P0095655 Slc9a6 protein_coding protein_coding MGP_NODShiLtJ_T0095656.1 MGP_NODShiLtJ_G0035526.1 mouse_genomes_project X 56383380 56439417 + MGP_NODShiLtJ_P0095656 Slc9a6 protein_coding protein_coding MGP_NODShiLtJ_T0095657.1 MGP_NODShiLtJ_G0035526.1 mouse_genomes_project X 56383422 56439028 + MGP_NODShiLtJ_P0095657 Slc9a6 protein_coding protein_coding MGP_NODShiLtJ_T0095658.1 MGP_NODShiLtJ_G0035526.1 mouse_genomes_project X 56433431 56439016 + Slc9a6 protein_coding retained_intron MGP_NODShiLtJ_T0016744.1 MGP_NODShiLtJ_G0014852.1 mouse_genomes_project X 175296508 175296772 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095446.1 MGP_NODShiLtJ_G0035456.1 mouse_genomes_project X 35579385 35583688 - MGP_NODShiLtJ_P0095446 C1galt1c1 protein_coding protein_coding MGP_NODShiLtJ_T0009339.1 MGP_NODShiLtJ_G0007481.1 mouse_genomes_project X 124223466 124225077 + 4930555B12Rik lincRNA lincRNA MGP_NODShiLtJ_T0100981.1 MGP_NODShiLtJ_G0039375.1 mouse_genomes_project X 170329309 170329441 + Gm25429 snoRNA snoRNA MGP_NODShiLtJ_T0016625.1 MGP_NODShiLtJ_G0014733.1 mouse_genomes_project X 149889762 149890058 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096571.1 MGP_NODShiLtJ_G0035753.1 mouse_genomes_project X 109713402 109846818 - MGP_NODShiLtJ_P0096571 Phka1 protein_coding protein_coding MGP_NODShiLtJ_T0096572.1 MGP_NODShiLtJ_G0035753.1 mouse_genomes_project X 109713402 109846818 - MGP_NODShiLtJ_P0096572 Phka1 protein_coding protein_coding MGP_NODShiLtJ_T0096573.1 MGP_NODShiLtJ_G0035753.1 mouse_genomes_project X 109713402 109846818 - MGP_NODShiLtJ_P0096573 Phka1 protein_coding protein_coding MGP_NODShiLtJ_T0096574.1 MGP_NODShiLtJ_G0035753.1 mouse_genomes_project X 109713402 109846818 - MGP_NODShiLtJ_P0096574 Phka1 protein_coding protein_coding MGP_NODShiLtJ_T0096575.1 MGP_NODShiLtJ_G0035753.1 mouse_genomes_project X 109713402 109846818 - MGP_NODShiLtJ_P0096575 Phka1 protein_coding protein_coding MGP_NODShiLtJ_T0096576.1 MGP_NODShiLtJ_G0035753.1 mouse_genomes_project X 109713402 109846818 - MGP_NODShiLtJ_P0096576 Phka1 protein_coding protein_coding MGP_NODShiLtJ_T0096577.1 MGP_NODShiLtJ_G0035753.1 mouse_genomes_project X 109756178 109846818 - Phka1 protein_coding retained_intron MGP_NODShiLtJ_T0095451.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 38951039 39168592 + Gria3 protein_coding retained_intron MGP_NODShiLtJ_T0095452.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 38951357 39233847 + MGP_NODShiLtJ_P0095452 Gria3 protein_coding protein_coding MGP_NODShiLtJ_T0095453.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 38951495 39235863 + MGP_NODShiLtJ_P0095453 Gria3 protein_coding protein_coding MGP_NODShiLtJ_T0095454.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 38951589 39233854 + Gria3 protein_coding retained_intron MGP_NODShiLtJ_T0095455.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 38951627 39235860 + MGP_NODShiLtJ_P0095455 Gria3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095456.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 38951673 39169047 + Gria3 protein_coding retained_intron MGP_NODShiLtJ_T0095457.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 38951756 39229739 + MGP_NODShiLtJ_P0095457 Gria3 protein_coding protein_coding MGP_NODShiLtJ_T0095458.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 38952931 39029126 + MGP_NODShiLtJ_P0095458 Gria3 protein_coding protein_coding MGP_NODShiLtJ_T0095459.1 MGP_NODShiLtJ_G0035460.1 mouse_genomes_project X 39165689 39176755 + Gria3 protein_coding retained_intron MGP_NODShiLtJ_T0011007.1 MGP_NODShiLtJ_G0009140.1 mouse_genomes_project X 1974520 1974585 - Mir362 miRNA miRNA MGP_NODShiLtJ_T0016116.1 MGP_NODShiLtJ_G0014224.1 mouse_genomes_project X 13580426 13582281 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098134.1 MGP_NODShiLtJ_G0036546.1 mouse_genomes_project X 166457886 166458005 + n-R5s13 rRNA rRNA MGP_NODShiLtJ_T0096221.1 MGP_NODShiLtJ_G0035654.1 mouse_genomes_project X 80422519 80587607 + MGP_NODShiLtJ_P0096221 Tbl1x protein_coding protein_coding MGP_NODShiLtJ_T0096222.1 MGP_NODShiLtJ_G0035654.1 mouse_genomes_project X 80422720 80584367 + Tbl1x protein_coding retained_intron MGP_NODShiLtJ_T0011067.1 MGP_NODShiLtJ_G0009200.1 mouse_genomes_project X 73684520 73684612 - Gm23945 miRNA miRNA MGP_NODShiLtJ_T0016103.1 MGP_NODShiLtJ_G0014211.1 mouse_genomes_project X 8783218 8784031 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095091.1 MGP_NODShiLtJ_G0035333.1 mouse_genomes_project X 2811528 2828628 - MGP_NODShiLtJ_P0095091 Glod5 protein_coding protein_coding MGP_NODShiLtJ_T0016178.1 MGP_NODShiLtJ_G0014286.1 mouse_genomes_project X 42455428 42456633 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095361.1 MGP_NODShiLtJ_G0035419.1 mouse_genomes_project X 33281852 33288007 - Gm14569 protein_coding processed_transcript MGP_NODShiLtJ_T0095362.1 MGP_NODShiLtJ_G0035419.1 mouse_genomes_project X 33281852 33284932 - Gm14569 protein_coding processed_transcript MGP_NODShiLtJ_T0095363.1 MGP_NODShiLtJ_G0035419.1 mouse_genomes_project X 33281852 33344093 - MGP_NODShiLtJ_P0095363 Gm14569 protein_coding protein_coding MGP_NODShiLtJ_T0095364.1 MGP_NODShiLtJ_G0035419.1 mouse_genomes_project X 33297152 33334891 - Gm14569 protein_coding processed_transcript MGP_NODShiLtJ_T0016341.1 MGP_NODShiLtJ_G0014449.1 mouse_genomes_project X 84392240 84392373 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011119.1 MGP_NODShiLtJ_G0009252.1 mouse_genomes_project X 183640651 183640760 - Gm22368 miRNA miRNA MGP_NODShiLtJ_T0016268.1 MGP_NODShiLtJ_G0014376.1 mouse_genomes_project X 68336180 68337617 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095867.1 MGP_NODShiLtJ_G0035598.1 mouse_genomes_project X 76075908 76080004 + MGP_NODShiLtJ_P0095867 Dusp9 protein_coding protein_coding MGP_NODShiLtJ_T0005512.1 MGP_NODShiLtJ_G0004641.1 mouse_genomes_project X 2987458 2989995 + Rbm3os antisense antisense MGP_NODShiLtJ_T0005513.1 MGP_NODShiLtJ_G0004641.1 mouse_genomes_project X 2987947 2989707 + Rbm3os antisense antisense MGP_NODShiLtJ_T0011105.1 MGP_NODShiLtJ_G0009238.1 mouse_genomes_project X 158986069 158986140 + Mir3472 miRNA miRNA MGP_NODShiLtJ_T0011100.1 MGP_NODShiLtJ_G0009233.1 mouse_genomes_project X 148998482 148998598 + Mir6383 miRNA miRNA MGP_NODShiLtJ_T0011057.1 MGP_NODShiLtJ_G0009190.1 mouse_genomes_project X 68119130 68119207 - Mir871 miRNA miRNA MGP_NODShiLtJ_T0016280.1 MGP_NODShiLtJ_G0014388.1 mouse_genomes_project X 70336586 70337801 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016307.1 MGP_NODShiLtJ_G0014415.1 mouse_genomes_project X 77827847 77828054 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016550.1 MGP_NODShiLtJ_G0014658.1 mouse_genomes_project X 127341433 127343126 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016571.1 MGP_NODShiLtJ_G0014679.1 mouse_genomes_project X 132377198 132385530 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096852.1 MGP_NODShiLtJ_G0035854.1 mouse_genomes_project X 147274608 147277588 - MGP_NODShiLtJ_P0096852 Armcx6 protein_coding protein_coding MGP_NODShiLtJ_T0096853.1 MGP_NODShiLtJ_G0035854.1 mouse_genomes_project X 147274610 147277674 - MGP_NODShiLtJ_P0096853 Armcx6 protein_coding protein_coding MGP_NODShiLtJ_T0096854.1 MGP_NODShiLtJ_G0035854.1 mouse_genomes_project X 147276226 147277604 - Armcx6 protein_coding processed_transcript MGP_NODShiLtJ_T0096855.1 MGP_NODShiLtJ_G0035854.1 mouse_genomes_project X 147276406 147277618 - Armcx6 protein_coding processed_transcript MGP_NODShiLtJ_T0016425.1 MGP_NODShiLtJ_G0014533.1 mouse_genomes_project X 105293117 105293605 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018476.1 MGP_NODShiLtJ_G0015646.1 mouse_genomes_project X 76260841 76263221 + Gm14817 processed_transcript processed_transcript MGP_NODShiLtJ_T0096561.1 MGP_NODShiLtJ_G0035751.1 mouse_genomes_project X 109442868 109447664 - MGP_NODShiLtJ_P0096561 Cited1 protein_coding protein_coding MGP_NODShiLtJ_T0096562.1 MGP_NODShiLtJ_G0035751.1 mouse_genomes_project X 109442891 109447335 - MGP_NODShiLtJ_P0096562 Cited1 protein_coding protein_coding MGP_NODShiLtJ_T0096563.1 MGP_NODShiLtJ_G0035751.1 mouse_genomes_project X 109443201 109446429 - MGP_NODShiLtJ_P0096563 Cited1 protein_coding protein_coding MGP_NODShiLtJ_T0096564.1 MGP_NODShiLtJ_G0035751.1 mouse_genomes_project X 109443308 109446258 - MGP_NODShiLtJ_P0096564 Cited1 protein_coding protein_coding MGP_NODShiLtJ_T0096565.1 MGP_NODShiLtJ_G0035751.1 mouse_genomes_project X 109443373 109447401 - MGP_NODShiLtJ_P0096565 Cited1 protein_coding protein_coding MGP_NODShiLtJ_T0016202.1 MGP_NODShiLtJ_G0014310.1 mouse_genomes_project X 50359392 50360492 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016431.1 MGP_NODShiLtJ_G0014539.1 mouse_genomes_project X 107066218 107066540 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096728.1 MGP_NODShiLtJ_G0035810.1 mouse_genomes_project X 121237964 121262648 - MGP_NODShiLtJ_P0096728 Satl1 protein_coding protein_coding MGP_NODShiLtJ_T0096729.1 MGP_NODShiLtJ_G0035810.1 mouse_genomes_project X 121237966 121263605 - MGP_NODShiLtJ_P0096729 Satl1 protein_coding protein_coding MGP_NODShiLtJ_T0016438.1 MGP_NODShiLtJ_G0014546.1 mouse_genomes_project X 108614846 108616107 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016751.1 MGP_NODShiLtJ_G0014859.1 mouse_genomes_project X 176315421 176317137 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011027.1 MGP_NODShiLtJ_G0009160.1 mouse_genomes_project X 51621296 51621357 - Mir6384 miRNA miRNA MGP_NODShiLtJ_T0005552.1 MGP_NODShiLtJ_G0004672.1 mouse_genomes_project X 176474249 176486488 - Gm15241 antisense antisense MGP_NODShiLtJ_T0095248.1 MGP_NODShiLtJ_G0035383.1 mouse_genomes_project X 14077571 14078416 + MGP_NODShiLtJ_P0095248 Dusp21 protein_coding protein_coding MGP_NODShiLtJ_T0102264.1 MGP_NODShiLtJ_G0040430.1 mouse_genomes_project X 102025406 102025941 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099713.1 MGP_NODShiLtJ_G0038107.1 mouse_genomes_project X 165868244 165868348 - Gm26441 snRNA snRNA MGP_NODShiLtJ_T0097328.1 MGP_NODShiLtJ_G0035984.1 mouse_genomes_project X 170411470 170414783 - MGP_NODShiLtJ_P0097328 Sat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097329.1 MGP_NODShiLtJ_G0035984.1 mouse_genomes_project X 170411470 170414783 - MGP_NODShiLtJ_P0097329 Sat1 protein_coding protein_coding MGP_NODShiLtJ_T0097330.1 MGP_NODShiLtJ_G0035984.1 mouse_genomes_project X 170411644 170414666 - Sat1 protein_coding retained_intron MGP_NODShiLtJ_T0097331.1 MGP_NODShiLtJ_G0035984.1 mouse_genomes_project X 170411644 170413238 - Sat1 protein_coding retained_intron MGP_NODShiLtJ_T0097332.1 MGP_NODShiLtJ_G0035984.1 mouse_genomes_project X 170411644 170412398 - Sat1 protein_coding retained_intron MGP_NODShiLtJ_T0097333.1 MGP_NODShiLtJ_G0035984.1 mouse_genomes_project X 170411653 170414679 - MGP_NODShiLtJ_P0097333 Sat1 protein_coding protein_coding MGP_NODShiLtJ_T0097334.1 MGP_NODShiLtJ_G0035984.1 mouse_genomes_project X 170413788 170414661 - Sat1 protein_coding retained_intron MGP_NODShiLtJ_T0095416.1 MGP_NODShiLtJ_G0035448.1 mouse_genomes_project X 34976912 34983827 - MGP_NODShiLtJ_P0095416 Rhox12 protein_coding protein_coding MGP_NODShiLtJ_T0095417.1 MGP_NODShiLtJ_G0035448.1 mouse_genomes_project X 34977013 34981360 - MGP_NODShiLtJ_P0095417 Rhox12 protein_coding protein_coding MGP_NODShiLtJ_T0095418.1 MGP_NODShiLtJ_G0035448.1 mouse_genomes_project X 34978412 34983707 - MGP_NODShiLtJ_P0095418 Rhox12 protein_coding protein_coding MGP_NODShiLtJ_T0016483.1 MGP_NODShiLtJ_G0014591.1 mouse_genomes_project X 112791750 112792777 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095360.1 MGP_NODShiLtJ_G0035418.1 mouse_genomes_project X 33261464 33262643 + MGP_NODShiLtJ_P0095360 protein_coding protein_coding MGP_NODShiLtJ_T0016738.1 MGP_NODShiLtJ_G0014846.1 mouse_genomes_project X 174022251 174022825 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097383.1 MGP_NODShiLtJ_G0035997.1 mouse_genomes_project X 175261296 175265677 + Eif1ax protein_coding retained_intron MGP_NODShiLtJ_T0097384.1 MGP_NODShiLtJ_G0035997.1 mouse_genomes_project X 175261296 175280284 + MGP_NODShiLtJ_P0097384 Eif1ax protein_coding protein_coding MGP_NODShiLtJ_T0097410.1 MGP_NODShiLtJ_G0036002.1 mouse_genomes_project X 176074165 176090407 - MGP_NODShiLtJ_P0097410 Pdha1 protein_coding protein_coding MGP_NODShiLtJ_T0097411.1 MGP_NODShiLtJ_G0036002.1 mouse_genomes_project X 176079272 176080947 - Pdha1 protein_coding retained_intron MGP_NODShiLtJ_T0097412.1 MGP_NODShiLtJ_G0036002.1 mouse_genomes_project X 176081269 176090303 - Pdha1 protein_coding retained_intron MGP_NODShiLtJ_T0097413.1 MGP_NODShiLtJ_G0036002.1 mouse_genomes_project X 176088887 176090350 - Pdha1 protein_coding processed_transcript MGP_NODShiLtJ_T0099681.1 MGP_NODShiLtJ_G0038075.1 mouse_genomes_project X 78308435 78308599 - Gm25421 snRNA snRNA MGP_NODShiLtJ_T0016573.1 MGP_NODShiLtJ_G0014681.1 mouse_genomes_project X 132506972 132507674 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016081.1 MGP_NODShiLtJ_G0014189.1 mouse_genomes_project X 4037217 4038149 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097216.1 MGP_NODShiLtJ_G0035955.1 mouse_genomes_project X 165665592 165675540 - MGP_NODShiLtJ_P0097216 Tsr2 protein_coding protein_coding MGP_NODShiLtJ_T0097217.1 MGP_NODShiLtJ_G0035955.1 mouse_genomes_project X 165665593 165675540 - MGP_NODShiLtJ_P0097217 Tsr2 protein_coding protein_coding MGP_NODShiLtJ_T0097218.1 MGP_NODShiLtJ_G0035955.1 mouse_genomes_project X 165667979 165675540 - MGP_NODShiLtJ_P0097218 Tsr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097219.1 MGP_NODShiLtJ_G0035955.1 mouse_genomes_project X 165668190 165675520 - Tsr2 protein_coding processed_transcript MGP_NODShiLtJ_T0016273.1 MGP_NODShiLtJ_G0014381.1 mouse_genomes_project X 69255424 69255987 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016588.1 MGP_NODShiLtJ_G0014696.1 mouse_genomes_project X 142163128 142163804 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002429.1 MGP_NODShiLtJ_G0002338.1 mouse_genomes_project X 75825991 75827247 + TEC TEC MGP_NODShiLtJ_T0016671.1 MGP_NODShiLtJ_G0014779.1 mouse_genomes_project X 158118559 158121167 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096617.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113474592 113635670 - MGP_NODShiLtJ_P0096617 Atrx protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096618.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113474596 113635698 - MGP_NODShiLtJ_P0096618 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096619.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113477398 113479032 - Atrx protein_coding retained_intron MGP_NODShiLtJ_T0096620.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113478731 113480781 - Atrx protein_coding retained_intron MGP_NODShiLtJ_T0096621.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113495141 113505490 - MGP_NODShiLtJ_P0096621 Atrx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096622.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113495167 113509011 - Atrx protein_coding processed_transcript MGP_NODShiLtJ_T0096623.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113505508 113517639 - MGP_NODShiLtJ_P0096623 Atrx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096624.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113517391 113525676 - Atrx protein_coding retained_intron MGP_NODShiLtJ_T0096625.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113517746 113525860 - Atrx protein_coding retained_intron MGP_NODShiLtJ_T0096626.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113525286 113530729 - Atrx protein_coding retained_intron MGP_NODShiLtJ_T0096627.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113525639 113530441 - Atrx protein_coding retained_intron MGP_NODShiLtJ_T0096628.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113530351 113562134 - Atrx protein_coding retained_intron MGP_NODShiLtJ_T0096629.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113530917 113562465 - MGP_NODShiLtJ_P0096629 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096630.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113535525 113579416 - MGP_NODShiLtJ_P0096630 Atrx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096631.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113547245 113562175 - MGP_NODShiLtJ_P0096631 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096632.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113561999 113635661 - MGP_NODShiLtJ_P0096632 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096633.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113563377 113635637 - MGP_NODShiLtJ_P0096633 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096634.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113563829 113635665 - MGP_NODShiLtJ_P0096634 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096635.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113563829 113635645 - MGP_NODShiLtJ_P0096635 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096636.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113564109 113635662 - MGP_NODShiLtJ_P0096636 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096637.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113564310 113635654 - MGP_NODShiLtJ_P0096637 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096638.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113564349 113635642 - MGP_NODShiLtJ_P0096638 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096639.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113565238 113567257 - Atrx protein_coding retained_intron MGP_NODShiLtJ_T0096640.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113565258 113635533 - MGP_NODShiLtJ_P0096640 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096641.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113568824 113633155 - MGP_NODShiLtJ_P0096641 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096642.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113575948 113635598 - MGP_NODShiLtJ_P0096642 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096643.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113579373 113635692 - MGP_NODShiLtJ_P0096643 Atrx protein_coding protein_coding MGP_NODShiLtJ_T0096644.1 MGP_NODShiLtJ_G0035777.1 mouse_genomes_project X 113593112 113635641 - Atrx protein_coding processed_transcript MGP_NODShiLtJ_T0011099.1 MGP_NODShiLtJ_G0009232.1 mouse_genomes_project X 148512525 148512629 - Mir1970 miRNA miRNA MGP_NODShiLtJ_T0099699.1 MGP_NODShiLtJ_G0038093.1 mouse_genomes_project X 119259255 119259446 - Gm26108 snRNA snRNA MGP_NODShiLtJ_T0095607.1 MGP_NODShiLtJ_G0035501.1 mouse_genomes_project X 50548637 50868585 - MGP_NODShiLtJ_P0095607 Hs6st2 protein_coding protein_coding MGP_NODShiLtJ_T0095608.1 MGP_NODShiLtJ_G0035501.1 mouse_genomes_project X 50548637 50868738 - MGP_NODShiLtJ_P0095608 Hs6st2 protein_coding protein_coding MGP_NODShiLtJ_T0095609.1 MGP_NODShiLtJ_G0035501.1 mouse_genomes_project X 50863664 50868230 - Hs6st2 protein_coding retained_intron MGP_NODShiLtJ_T0095610.1 MGP_NODShiLtJ_G0035501.1 mouse_genomes_project X 50866873 50867447 - Hs6st2 protein_coding processed_transcript MGP_NODShiLtJ_T0095611.1 MGP_NODShiLtJ_G0035501.1 mouse_genomes_project X 50867059 50867968 - Hs6st2 protein_coding processed_transcript MGP_NODShiLtJ_T0016581.1 MGP_NODShiLtJ_G0014689.1 mouse_genomes_project X 138002081 138002445 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095805.1 MGP_NODShiLtJ_G0035572.1 mouse_genomes_project X 73827374 73833885 + MGP_NODShiLtJ_P0095805 Gpr50 protein_coding protein_coding MGP_NODShiLtJ_T0095806.1 MGP_NODShiLtJ_G0035572.1 mouse_genomes_project X 73827673 73832020 + Gpr50 protein_coding processed_transcript MGP_NODShiLtJ_T0095807.1 MGP_NODShiLtJ_G0035572.1 mouse_genomes_project X 73827673 73832020 + Gpr50 protein_coding processed_transcript MGP_NODShiLtJ_T0095330.1 MGP_NODShiLtJ_G0035405.1 mouse_genomes_project X 17454878 17460251 + MGP_NODShiLtJ_P0095330 Ssxa1 protein_coding protein_coding MGP_NODShiLtJ_T0095331.1 MGP_NODShiLtJ_G0035405.1 mouse_genomes_project X 17457430 17460251 + MGP_NODShiLtJ_P0095331 Ssxa1 protein_coding protein_coding MGP_NODShiLtJ_T0016100.1 MGP_NODShiLtJ_G0014208.1 mouse_genomes_project X 8296266 8296623 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097132.1 MGP_NODShiLtJ_G0035943.1 mouse_genomes_project X 159451338 159513463 - MGP_NODShiLtJ_P0097132 Amot protein_coding protein_coding MGP_NODShiLtJ_T0097133.1 MGP_NODShiLtJ_G0035943.1 mouse_genomes_project X 159451341 159513536 - MGP_NODShiLtJ_P0097133 Amot protein_coding protein_coding MGP_NODShiLtJ_T0097134.1 MGP_NODShiLtJ_G0035943.1 mouse_genomes_project X 159456780 159495504 - MGP_NODShiLtJ_P0097134 Amot protein_coding protein_coding MGP_NODShiLtJ_T0097135.1 MGP_NODShiLtJ_G0035943.1 mouse_genomes_project X 159464687 159466848 - Amot protein_coding retained_intron MGP_NODShiLtJ_T0097136.1 MGP_NODShiLtJ_G0035943.1 mouse_genomes_project X 159484117 159513573 - MGP_NODShiLtJ_P0097136 Amot protein_coding protein_coding MGP_NODShiLtJ_T0102287.1 MGP_NODShiLtJ_G0040453.1 mouse_genomes_project X 176270486 176270779 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016694.1 MGP_NODShiLtJ_G0014802.1 mouse_genomes_project X 165212978 165213573 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016467.1 MGP_NODShiLtJ_G0014575.1 mouse_genomes_project X 111072022 111072588 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095326.1 MGP_NODShiLtJ_G0035404.1 mouse_genomes_project X 17415998 17429064 - MGP_NODShiLtJ_P0095326 Zfp300 protein_coding protein_coding MGP_NODShiLtJ_T0095327.1 MGP_NODShiLtJ_G0035404.1 mouse_genomes_project X 17419615 17429080 - MGP_NODShiLtJ_P0095327 Zfp300 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095328.1 MGP_NODShiLtJ_G0035404.1 mouse_genomes_project X 17421971 17428821 - Zfp300 protein_coding retained_intron MGP_NODShiLtJ_T0095329.1 MGP_NODShiLtJ_G0035404.1 mouse_genomes_project X 17422279 17429362 - Zfp300 protein_coding processed_transcript MGP_NODShiLtJ_T0095074.1 MGP_NODShiLtJ_G0035327.1 mouse_genomes_project X 2709721 2709873 - MGP_NODShiLtJ_P0095074 protein_coding protein_coding MGP_NODShiLtJ_T0016597.1 MGP_NODShiLtJ_G0014705.1 mouse_genomes_project X 145150046 145151098 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096967.1 MGP_NODShiLtJ_G0035894.1 mouse_genomes_project X 149889762 149890058 + MGP_NODShiLtJ_P0096967 Vma21-ps protein_coding protein_coding MGP_NODShiLtJ_T0016620.1 MGP_NODShiLtJ_G0014728.1 mouse_genomes_project X 149553016 149553423 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095726.1 MGP_NODShiLtJ_G0035546.1 mouse_genomes_project X 61420124 61421529 - MGP_NODShiLtJ_P0095726 protein_coding protein_coding MGP_NODShiLtJ_T0016260.1 MGP_NODShiLtJ_G0014368.1 mouse_genomes_project X 64824315 64824668 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016677.1 MGP_NODShiLtJ_G0014785.1 mouse_genomes_project X 159615744 159616209 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011676.1 MGP_NODShiLtJ_G0009809.1 mouse_genomes_project X 179307092 179307348 - Gm23501 misc_RNA misc_RNA MGP_NODShiLtJ_T0096994.1 MGP_NODShiLtJ_G0035903.1 mouse_genomes_project X 152529877 152556886 + MGP_NODShiLtJ_P0096994 Mum1l1 protein_coding protein_coding MGP_NODShiLtJ_T0096995.1 MGP_NODShiLtJ_G0035903.1 mouse_genomes_project X 152529877 152560244 + MGP_NODShiLtJ_P0096995 Mum1l1 protein_coding protein_coding MGP_NODShiLtJ_T0096996.1 MGP_NODShiLtJ_G0035903.1 mouse_genomes_project X 152529879 152560246 + MGP_NODShiLtJ_P0096996 Mum1l1 protein_coding protein_coding MGP_NODShiLtJ_T0096997.1 MGP_NODShiLtJ_G0035903.1 mouse_genomes_project X 152529943 152533121 + Mum1l1 protein_coding retained_intron MGP_NODShiLtJ_T0096998.1 MGP_NODShiLtJ_G0035903.1 mouse_genomes_project X 152537001 152560246 + MGP_NODShiLtJ_P0096998 Mum1l1 protein_coding protein_coding MGP_NODShiLtJ_T0096999.1 MGP_NODShiLtJ_G0035903.1 mouse_genomes_project X 152537001 152560246 + MGP_NODShiLtJ_P0096999 Mum1l1 protein_coding protein_coding MGP_NODShiLtJ_T0097000.1 MGP_NODShiLtJ_G0035903.1 mouse_genomes_project X 152537001 152556713 + MGP_NODShiLtJ_P0097000 Mum1l1 protein_coding protein_coding MGP_NODShiLtJ_T0097001.1 MGP_NODShiLtJ_G0035903.1 mouse_genomes_project X 152537001 152556952 + MGP_NODShiLtJ_P0097001 Mum1l1 protein_coding protein_coding MGP_NODShiLtJ_T0095249.1 MGP_NODShiLtJ_G0035384.1 mouse_genomes_project X 14098572 14272436 + MGP_NODShiLtJ_P0095249 Kdm6a protein_coding protein_coding MGP_NODShiLtJ_T0095250.1 MGP_NODShiLtJ_G0035384.1 mouse_genomes_project X 14098572 14272436 + MGP_NODShiLtJ_P0095250 Kdm6a protein_coding protein_coding MGP_NODShiLtJ_T0095251.1 MGP_NODShiLtJ_G0035384.1 mouse_genomes_project X 14098645 14237324 + Kdm6a protein_coding retained_intron MGP_NODShiLtJ_T0095252.1 MGP_NODShiLtJ_G0035384.1 mouse_genomes_project X 14264331 14271185 + Kdm6a protein_coding retained_intron MGP_NODShiLtJ_T0097538.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182818035 182976947 + MGP_NODShiLtJ_P0097538 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097539.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182818096 182976947 + MGP_NODShiLtJ_P0097539 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097540.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182818096 182976947 + MGP_NODShiLtJ_P0097540 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097541.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931711 182976947 + MGP_NODShiLtJ_P0097541 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097542.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931711 182971960 + MGP_NODShiLtJ_P0097542 Gpm6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097543.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931711 182976947 + MGP_NODShiLtJ_P0097543 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097544.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931711 182976947 + MGP_NODShiLtJ_P0097544 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097545.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931711 182976947 + MGP_NODShiLtJ_P0097545 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097546.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931711 182971960 + MGP_NODShiLtJ_P0097546 Gpm6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097547.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931711 182976947 + MGP_NODShiLtJ_P0097547 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097548.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931711 182976947 + MGP_NODShiLtJ_P0097548 Gpm6b protein_coding protein_coding MGP_NODShiLtJ_T0097549.1 MGP_NODShiLtJ_G0036038.1 mouse_genomes_project X 182931861 182961247 + Gpm6b protein_coding retained_intron MGP_NODShiLtJ_T0095813.1 MGP_NODShiLtJ_G0035574.1 mouse_genomes_project X 74157499 74176512 + MGP_NODShiLtJ_P0095813 Gm1141 protein_coding protein_coding MGP_NODShiLtJ_T0095814.1 MGP_NODShiLtJ_G0035574.1 mouse_genomes_project X 74164014 74172567 + MGP_NODShiLtJ_P0095814 Gm1141 protein_coding protein_coding MGP_NODShiLtJ_T0096097.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76850805 76853983 + Plxna3 protein_coding processed_transcript MGP_NODShiLtJ_T0096098.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76850805 76866412 + MGP_NODShiLtJ_P0096098 Plxna3 protein_coding protein_coding MGP_NODShiLtJ_T0096099.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76854196 76866406 + Plxna3 protein_coding retained_intron MGP_NODShiLtJ_T0096100.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76855485 76856443 + Plxna3 protein_coding retained_intron MGP_NODShiLtJ_T0096101.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76856065 76857562 + Plxna3 protein_coding retained_intron MGP_NODShiLtJ_T0096102.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76856971 76858059 + Plxna3 protein_coding retained_intron MGP_NODShiLtJ_T0096103.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76859988 76861039 + Plxna3 protein_coding retained_intron MGP_NODShiLtJ_T0096104.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76860071 76860882 + Plxna3 protein_coding retained_intron MGP_NODShiLtJ_T0096105.1 MGP_NODShiLtJ_G0035627.1 mouse_genomes_project X 76863309 76865668 + Plxna3 protein_coding retained_intron MGP_NODShiLtJ_T0016602.1 MGP_NODShiLtJ_G0014710.1 mouse_genomes_project X 146509053 146510682 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011066.1 MGP_NODShiLtJ_G0009199.1 mouse_genomes_project X 69612411 69612486 - Mir509 miRNA miRNA MGP_NODShiLtJ_T0016539.1 MGP_NODShiLtJ_G0014647.1 mouse_genomes_project X 124643935 124647039 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016233.1 MGP_NODShiLtJ_G0014341.1 mouse_genomes_project X 60148976 60149572 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095873.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76122857 76132211 + MGP_NODShiLtJ_P0095873 Slc6a8 protein_coding protein_coding MGP_NODShiLtJ_T0095874.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76123410 76130996 + MGP_NODShiLtJ_P0095874 Slc6a8 protein_coding protein_coding MGP_NODShiLtJ_T0095875.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76123492 76132214 + MGP_NODShiLtJ_P0095875 Slc6a8 protein_coding protein_coding MGP_NODShiLtJ_T0095876.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76123622 76127030 + Slc6a8 protein_coding retained_intron MGP_NODShiLtJ_T0095877.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76125210 76127049 + MGP_NODShiLtJ_P0095877 Slc6a8 protein_coding protein_coding MGP_NODShiLtJ_T0095878.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76126550 76132211 + MGP_NODShiLtJ_P0095878 Slc6a8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095879.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76126763 76129473 + Slc6a8 protein_coding retained_intron MGP_NODShiLtJ_T0095880.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76127858 76130805 + Slc6a8 protein_coding retained_intron MGP_NODShiLtJ_T0095881.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76128582 76129704 + Slc6a8 protein_coding processed_transcript MGP_NODShiLtJ_T0095882.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76128597 76129620 + Slc6a8 protein_coding retained_intron MGP_NODShiLtJ_T0095883.1 MGP_NODShiLtJ_G0035600.1 mouse_genomes_project X 76128597 76129707 + Slc6a8 protein_coding retained_intron MGP_NODShiLtJ_T0095641.1 MGP_NODShiLtJ_G0035519.1 mouse_genomes_project X 53129849 53144217 - MGP_NODShiLtJ_P0095641 1700013H16Rik protein_coding protein_coding MGP_NODShiLtJ_T0016150.1 MGP_NODShiLtJ_G0014258.1 mouse_genomes_project X 35318807 35319202 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096333.1 MGP_NODShiLtJ_G0035695.1 mouse_genomes_project X 100899424 100901915 + MGP_NODShiLtJ_P0096333 Gspt2 protein_coding protein_coding MGP_NODShiLtJ_T0096334.1 MGP_NODShiLtJ_G0035695.1 mouse_genomes_project X 100899431 100906600 + MGP_NODShiLtJ_P0096334 Gspt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100987.1 MGP_NODShiLtJ_G0039381.1 mouse_genomes_project X 178939664 178939783 + Gm23786 snoRNA snoRNA MGP_NODShiLtJ_T0016648.1 MGP_NODShiLtJ_G0014756.1 mouse_genomes_project X 155199678 155199978 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016516.1 MGP_NODShiLtJ_G0014624.1 mouse_genomes_project X 120691201 120691749 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016254.1 MGP_NODShiLtJ_G0014362.1 mouse_genomes_project X 63171092 63171574 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096767.1 MGP_NODShiLtJ_G0035830.1 mouse_genomes_project X 139678449 139680313 + MGP_NODShiLtJ_P0096767 Rbm31y protein_coding protein_coding MGP_NODShiLtJ_T0095639.1 MGP_NODShiLtJ_G0035517.1 mouse_genomes_project X 53052766 53053614 - MGP_NODShiLtJ_P0095639 Cxx1b protein_coding protein_coding MGP_NODShiLtJ_T0095727.1 MGP_NODShiLtJ_G0035547.1 mouse_genomes_project X 62026256 62027715 + MGP_NODShiLtJ_P0095727 Ldoc1 protein_coding protein_coding MGP_NODShiLtJ_T0016324.1 MGP_NODShiLtJ_G0014432.1 mouse_genomes_project X 80695747 80696516 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096447.1 MGP_NODShiLtJ_G0035727.1 mouse_genomes_project X 107731455 107734058 + Gdpd2 protein_coding processed_transcript MGP_NODShiLtJ_T0096448.1 MGP_NODShiLtJ_G0035727.1 mouse_genomes_project X 107731520 107736823 + Gdpd2 protein_coding retained_intron MGP_NODShiLtJ_T0096449.1 MGP_NODShiLtJ_G0035727.1 mouse_genomes_project X 107731524 107740504 + MGP_NODShiLtJ_P0096449 Gdpd2 protein_coding protein_coding MGP_NODShiLtJ_T0096450.1 MGP_NODShiLtJ_G0035727.1 mouse_genomes_project X 107731768 107740504 + MGP_NODShiLtJ_P0096450 Gdpd2 protein_coding protein_coding MGP_NODShiLtJ_T0096451.1 MGP_NODShiLtJ_G0035727.1 mouse_genomes_project X 107737949 107740505 + Gdpd2 protein_coding retained_intron MGP_NODShiLtJ_T0099658.1 MGP_NODShiLtJ_G0038052.1 mouse_genomes_project X 16899595 16899768 - Gm23628 snRNA snRNA MGP_NODShiLtJ_T0016574.1 MGP_NODShiLtJ_G0014682.1 mouse_genomes_project X 132716164 132717721 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016232.1 MGP_NODShiLtJ_G0014340.1 mouse_genomes_project X 60143052 60144171 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097455.1 MGP_NODShiLtJ_G0036014.1 mouse_genomes_project X 178985659 179008625 - MGP_NODShiLtJ_P0097455 protein_coding protein_coding MGP_NODShiLtJ_T0097456.1 MGP_NODShiLtJ_G0036014.1 mouse_genomes_project X 178985660 179028291 - MGP_NODShiLtJ_P0097456 protein_coding protein_coding MGP_NODShiLtJ_T0097457.1 MGP_NODShiLtJ_G0036014.1 mouse_genomes_project X 179026896 179028291 - protein_coding processed_transcript MGP_NODShiLtJ_T0016595.1 MGP_NODShiLtJ_G0014703.1 mouse_genomes_project X 144251889 144252791 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099668.1 MGP_NODShiLtJ_G0038062.1 mouse_genomes_project X 47062808 47062967 + Gm24038 snRNA snRNA MGP_NODShiLtJ_T0096440.1 MGP_NODShiLtJ_G0035725.1 mouse_genomes_project X 107619954 107623010 - Pdzd11 protein_coding retained_intron MGP_NODShiLtJ_T0096441.1 MGP_NODShiLtJ_G0035725.1 mouse_genomes_project X 107619957 107623640 - MGP_NODShiLtJ_P0096441 Pdzd11 protein_coding protein_coding MGP_NODShiLtJ_T0096442.1 MGP_NODShiLtJ_G0035725.1 mouse_genomes_project X 107619979 107623007 - MGP_NODShiLtJ_P0096442 Pdzd11 protein_coding protein_coding MGP_NODShiLtJ_T0096443.1 MGP_NODShiLtJ_G0035725.1 mouse_genomes_project X 107620448 107623343 - Pdzd11 protein_coding processed_transcript MGP_NODShiLtJ_T0095190.1 MGP_NODShiLtJ_G0035365.1 mouse_genomes_project X 7301903 7348316 - MGP_NODShiLtJ_P0095190 Bcor protein_coding protein_coding MGP_NODShiLtJ_T0095191.1 MGP_NODShiLtJ_G0035365.1 mouse_genomes_project X 7301903 7348316 - MGP_NODShiLtJ_P0095191 Bcor protein_coding protein_coding MGP_NODShiLtJ_T0095192.1 MGP_NODShiLtJ_G0035365.1 mouse_genomes_project X 7301903 7348316 - MGP_NODShiLtJ_P0095192 Bcor protein_coding protein_coding MGP_NODShiLtJ_T0095193.1 MGP_NODShiLtJ_G0035365.1 mouse_genomes_project X 7301903 7348316 - MGP_NODShiLtJ_P0095193 Bcor protein_coding protein_coding MGP_NODShiLtJ_T0095194.1 MGP_NODShiLtJ_G0035365.1 mouse_genomes_project X 7301906 7437497 - MGP_NODShiLtJ_P0095194 Bcor protein_coding protein_coding MGP_NODShiLtJ_T0095195.1 MGP_NODShiLtJ_G0035365.1 mouse_genomes_project X 7324135 7403489 - MGP_NODShiLtJ_P0095195 Bcor protein_coding protein_coding MGP_NODShiLtJ_T0095196.1 MGP_NODShiLtJ_G0035365.1 mouse_genomes_project X 7324225 7403439 - MGP_NODShiLtJ_P0095196 Bcor protein_coding protein_coding MGP_NODShiLtJ_T0016283.1 MGP_NODShiLtJ_G0014391.1 mouse_genomes_project X 72461679 72462627 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011110.1 MGP_NODShiLtJ_G0009243.1 mouse_genomes_project X 161430076 161430174 + Mir1298 miRNA miRNA MGP_NODShiLtJ_T0096477.1 MGP_NODShiLtJ_G0035733.1 mouse_genomes_project X 108333433 108336033 - Gm614 protein_coding processed_transcript MGP_NODShiLtJ_T0096478.1 MGP_NODShiLtJ_G0035733.1 mouse_genomes_project X 108333433 108336050 - MGP_NODShiLtJ_P0096478 Gm614 protein_coding protein_coding MGP_NODShiLtJ_T0095552.1 MGP_NODShiLtJ_G0035483.1 mouse_genomes_project X 47422668 47476620 - MGP_NODShiLtJ_P0095552 Zfp280c protein_coding protein_coding MGP_NODShiLtJ_T0095553.1 MGP_NODShiLtJ_G0035483.1 mouse_genomes_project X 47422668 47473729 - MGP_NODShiLtJ_P0095553 Zfp280c protein_coding protein_coding MGP_NODShiLtJ_T0095554.1 MGP_NODShiLtJ_G0035483.1 mouse_genomes_project X 47422668 47476699 - MGP_NODShiLtJ_P0095554 Zfp280c protein_coding protein_coding MGP_NODShiLtJ_T0095555.1 MGP_NODShiLtJ_G0035483.1 mouse_genomes_project X 47422669 47473357 - MGP_NODShiLtJ_P0095555 Zfp280c protein_coding protein_coding MGP_NODShiLtJ_T0095556.1 MGP_NODShiLtJ_G0035483.1 mouse_genomes_project X 47423800 47424747 - Zfp280c protein_coding retained_intron MGP_NODShiLtJ_T0095557.1 MGP_NODShiLtJ_G0035483.1 mouse_genomes_project X 47459545 47476638 - Zfp280c protein_coding processed_transcript MGP_NODShiLtJ_T0095558.1 MGP_NODShiLtJ_G0035483.1 mouse_genomes_project X 47467690 47476751 - Zfp280c protein_coding processed_transcript MGP_NODShiLtJ_T0016743.1 MGP_NODShiLtJ_G0014851.1 mouse_genomes_project X 174953390 174955954 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016598.1 MGP_NODShiLtJ_G0014706.1 mouse_genomes_project X 145332251 145333039 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100959.1 MGP_NODShiLtJ_G0039353.1 mouse_genomes_project X 100650831 100650941 - Gm24595 snoRNA snoRNA MGP_NODShiLtJ_T0102239.1 MGP_NODShiLtJ_G0040405.1 mouse_genomes_project X 34797101 34801888 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016332.1 MGP_NODShiLtJ_G0014440.1 mouse_genomes_project X 81751238 81752222 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099662.1 MGP_NODShiLtJ_G0038056.1 mouse_genomes_project X 33214937 33215041 + Gm25047 snRNA snRNA MGP_NODShiLtJ_T0016216.1 MGP_NODShiLtJ_G0014324.1 mouse_genomes_project X 53719913 53720090 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016761.1 MGP_NODShiLtJ_G0014869.1 mouse_genomes_project X 179050040 179050726 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095884.1 MGP_NODShiLtJ_G0035601.1 mouse_genomes_project X 76135879 76166653 - MGP_NODShiLtJ_P0095884 Bcap31 protein_coding protein_coding MGP_NODShiLtJ_T0096796.1 MGP_NODShiLtJ_G0035838.1 mouse_genomes_project X 146546765 146574233 - MGP_NODShiLtJ_P0096796 Nox1 protein_coding protein_coding MGP_NODShiLtJ_T0096797.1 MGP_NODShiLtJ_G0035838.1 mouse_genomes_project X 146547398 146574144 - MGP_NODShiLtJ_P0096797 Nox1 protein_coding protein_coding MGP_NODShiLtJ_T0096798.1 MGP_NODShiLtJ_G0035838.1 mouse_genomes_project X 146547490 146574087 - MGP_NODShiLtJ_P0096798 Nox1 protein_coding protein_coding MGP_NODShiLtJ_T0096799.1 MGP_NODShiLtJ_G0035838.1 mouse_genomes_project X 146568700 146693587 - MGP_NODShiLtJ_P0096799 Nox1 protein_coding protein_coding MGP_NODShiLtJ_T0096800.1 MGP_NODShiLtJ_G0035838.1 mouse_genomes_project X 146568700 146602307 - MGP_NODShiLtJ_P0096800 Nox1 protein_coding protein_coding MGP_NODShiLtJ_T0016615.1 MGP_NODShiLtJ_G0014723.1 mouse_genomes_project X 149383785 149384230 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097163.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165015271 165086487 - MGP_NODShiLtJ_P0097163 Apex2 protein_coding protein_coding MGP_NODShiLtJ_T0097164.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165017095 165084725 - MGP_NODShiLtJ_P0097164 Apex2 protein_coding protein_coding MGP_NODShiLtJ_T0097169.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165065528 165086487 - MGP_NODShiLtJ_P0097169 Apex2 protein_coding protein_coding MGP_NODShiLtJ_T0097170.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165068173 165084728 - Apex2 protein_coding retained_intron MGP_NODShiLtJ_T0097171.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165068174 165086511 - Apex2 protein_coding processed_transcript MGP_NODShiLtJ_T0097172.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165068174 165084739 - MGP_NODShiLtJ_P0097172 Apex2 protein_coding protein_coding MGP_NODShiLtJ_T0097173.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165068174 165084792 - MGP_NODShiLtJ_P0097173 Apex2 protein_coding protein_coding MGP_NODShiLtJ_T0097174.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165069125 165082877 - Apex2 protein_coding processed_transcript MGP_NODShiLtJ_T0097175.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165069215 165084714 - MGP_NODShiLtJ_P0097175 Apex2 protein_coding protein_coding MGP_NODShiLtJ_T0097176.1 MGP_NODShiLtJ_G0035948.1 mouse_genomes_project X 165080802 165084724 - MGP_NODShiLtJ_P0097176 Apex2 protein_coding protein_coding MGP_NODShiLtJ_T0095725.1 MGP_NODShiLtJ_G0035545.1 mouse_genomes_project X 61069224 61071289 - MGP_NODShiLtJ_P0095725 Sox3 protein_coding protein_coding MGP_NODShiLtJ_T0011015.1 MGP_NODShiLtJ_G0009148.1 mouse_genomes_project X 15249696 15249775 - Mir222 miRNA miRNA MGP_NODShiLtJ_T0095815.1 MGP_NODShiLtJ_G0035575.1 mouse_genomes_project X 74201886 74205914 + MGP_NODShiLtJ_P0095815 Prrg3 protein_coding protein_coding MGP_NODShiLtJ_T0095816.1 MGP_NODShiLtJ_G0035575.1 mouse_genomes_project X 74201887 74209359 + MGP_NODShiLtJ_P0095816 Prrg3 protein_coding protein_coding MGP_NODShiLtJ_T0095817.1 MGP_NODShiLtJ_G0035575.1 mouse_genomes_project X 74202244 74211977 + MGP_NODShiLtJ_P0095817 Prrg3 protein_coding protein_coding MGP_NODShiLtJ_T0016623.1 MGP_NODShiLtJ_G0014731.1 mouse_genomes_project X 149794283 149794701 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016569.1 MGP_NODShiLtJ_G0014677.1 mouse_genomes_project X 131771945 131773383 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095846.1 MGP_NODShiLtJ_G0035590.1 mouse_genomes_project X 75605432 75618610 - MGP_NODShiLtJ_P0095846 protein_coding protein_coding MGP_NODShiLtJ_T0095837.1 MGP_NODShiLtJ_G0035585.1 mouse_genomes_project X 75313556 75360591 + MGP_NODShiLtJ_P0095837 Zfp185 protein_coding protein_coding MGP_NODShiLtJ_T0095838.1 MGP_NODShiLtJ_G0035585.1 mouse_genomes_project X 75313577 75360591 + MGP_NODShiLtJ_P0095838 Zfp185 protein_coding protein_coding MGP_NODShiLtJ_T0095839.1 MGP_NODShiLtJ_G0035585.1 mouse_genomes_project X 75314470 75323787 + MGP_NODShiLtJ_P0095839 Zfp185 protein_coding protein_coding MGP_NODShiLtJ_T0009328.1 MGP_NODShiLtJ_G0007478.1 mouse_genomes_project X 111035186 111101171 - Ftx lincRNA lincRNA MGP_NODShiLtJ_T0009329.1 MGP_NODShiLtJ_G0007478.1 mouse_genomes_project X 111037176 111091337 - Ftx lincRNA lincRNA MGP_NODShiLtJ_T0009330.1 MGP_NODShiLtJ_G0007478.1 mouse_genomes_project X 111043847 111101080 - Ftx lincRNA lincRNA MGP_NODShiLtJ_T0009331.1 MGP_NODShiLtJ_G0007478.1 mouse_genomes_project X 111043847 111091297 - Ftx lincRNA lincRNA MGP_NODShiLtJ_T0009332.1 MGP_NODShiLtJ_G0007478.1 mouse_genomes_project X 111081804 111101171 - Ftx lincRNA lincRNA MGP_NODShiLtJ_T0009333.1 MGP_NODShiLtJ_G0007478.1 mouse_genomes_project X 111081857 111099896 - Ftx lincRNA lincRNA MGP_NODShiLtJ_T0095528.1 MGP_NODShiLtJ_G0035476.1 mouse_genomes_project X 46962154 46977279 + MGP_NODShiLtJ_P0095528 Sash3 protein_coding protein_coding MGP_NODShiLtJ_T0095914.1 MGP_NODShiLtJ_G0035607.1 mouse_genomes_project X 76258985 76292057 - MGP_NODShiLtJ_P0095914 Pdzd4 protein_coding protein_coding MGP_NODShiLtJ_T0095915.1 MGP_NODShiLtJ_G0035607.1 mouse_genomes_project X 76258985 76292057 - MGP_NODShiLtJ_P0095915 Pdzd4 protein_coding protein_coding MGP_NODShiLtJ_T0016477.1 MGP_NODShiLtJ_G0014585.1 mouse_genomes_project X 112361668 112362062 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096886.1 MGP_NODShiLtJ_G0035866.1 mouse_genomes_project X 148367141 148408275 - MGP_NODShiLtJ_P0096886 Tcp11x2 protein_coding protein_coding MGP_NODShiLtJ_T0095149.1 MGP_NODShiLtJ_G0035350.1 mouse_genomes_project X 4032460 4033301 + MGP_NODShiLtJ_P0095149 protein_coding protein_coding MGP_NODShiLtJ_T0099712.1 MGP_NODShiLtJ_G0038106.1 mouse_genomes_project X 160462476 160462536 - Gm26151 snRNA snRNA MGP_NODShiLtJ_T0016441.1 MGP_NODShiLtJ_G0014549.1 mouse_genomes_project X 108896163 108896686 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096583.1 MGP_NODShiLtJ_G0035757.1 mouse_genomes_project X 110085200 110089020 + MGP_NODShiLtJ_P0096583 Dmrtc1c1 protein_coding protein_coding MGP_NODShiLtJ_T0096585.1 MGP_NODShiLtJ_G0035757.1 mouse_genomes_project X 110085982 110091702 + MGP_NODShiLtJ_P0096585 Dmrtc1c1 protein_coding protein_coding MGP_NODShiLtJ_T0016421.1 MGP_NODShiLtJ_G0014529.1 mouse_genomes_project X 103630832 103631637 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097372.1 MGP_NODShiLtJ_G0035995.1 mouse_genomes_project X 173458636 173776804 - MGP_NODShiLtJ_P0097372 Cnksr2 protein_coding protein_coding MGP_NODShiLtJ_T0097373.1 MGP_NODShiLtJ_G0035995.1 mouse_genomes_project X 173476813 173776349 - MGP_NODShiLtJ_P0097373 Cnksr2 protein_coding protein_coding MGP_NODShiLtJ_T0096370.1 MGP_NODShiLtJ_G0035706.1 mouse_genomes_project X 102985536 103124236 + MGP_NODShiLtJ_P0096370 Heph protein_coding protein_coding MGP_NODShiLtJ_T0096371.1 MGP_NODShiLtJ_G0035706.1 mouse_genomes_project X 102986550 103079985 + MGP_NODShiLtJ_P0096371 Heph protein_coding protein_coding MGP_NODShiLtJ_T0096372.1 MGP_NODShiLtJ_G0035706.1 mouse_genomes_project X 102986567 103124233 + MGP_NODShiLtJ_P0096372 Heph protein_coding protein_coding MGP_NODShiLtJ_T0096373.1 MGP_NODShiLtJ_G0035706.1 mouse_genomes_project X 102986605 103012926 + Heph protein_coding retained_intron MGP_NODShiLtJ_T0096374.1 MGP_NODShiLtJ_G0035706.1 mouse_genomes_project X 102986605 103026239 + Heph protein_coding retained_intron MGP_NODShiLtJ_T0016151.1 MGP_NODShiLtJ_G0014259.1 mouse_genomes_project X 35705148 35705442 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016076.1 MGP_NODShiLtJ_G0014184.1 mouse_genomes_project X 3868038 3868632 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096555.1 MGP_NODShiLtJ_G0035748.1 mouse_genomes_project X 109296604 109305169 + MGP_NODShiLtJ_P0096555 Pin4 protein_coding protein_coding MGP_NODShiLtJ_T0096556.1 MGP_NODShiLtJ_G0035748.1 mouse_genomes_project X 109296726 109305166 + Pin4 protein_coding processed_transcript MGP_NODShiLtJ_T0096293.1 MGP_NODShiLtJ_G0035686.1 mouse_genomes_project X 99750947 99850571 + MGP_NODShiLtJ_P0096293 Pcyt1b protein_coding protein_coding MGP_NODShiLtJ_T0096294.1 MGP_NODShiLtJ_G0035686.1 mouse_genomes_project X 99780216 99850571 + MGP_NODShiLtJ_P0096294 Pcyt1b protein_coding protein_coding MGP_NODShiLtJ_T0096295.1 MGP_NODShiLtJ_G0035686.1 mouse_genomes_project X 99832181 99835476 + Pcyt1b protein_coding processed_transcript MGP_NODShiLtJ_T0096259.1 MGP_NODShiLtJ_G0035670.1 mouse_genomes_project X 89920186 89970851 + MGP_NODShiLtJ_P0096259 protein_coding protein_coding MGP_NODShiLtJ_T0096260.1 MGP_NODShiLtJ_G0035670.1 mouse_genomes_project X 89920191 89921778 + protein_coding processed_transcript MGP_NODShiLtJ_T0096261.1 MGP_NODShiLtJ_G0035670.1 mouse_genomes_project X 89920281 89991985 + MGP_NODShiLtJ_P0096261 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096262.1 MGP_NODShiLtJ_G0035670.1 mouse_genomes_project X 89920302 89970641 + MGP_NODShiLtJ_P0096262 protein_coding protein_coding MGP_NODShiLtJ_T0016521.1 MGP_NODShiLtJ_G0014629.1 mouse_genomes_project X 121523149 121524057 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096545.1 MGP_NODShiLtJ_G0035746.1 mouse_genomes_project X 108996862 109100836 + Nhsl2 protein_coding processed_transcript MGP_NODShiLtJ_T0096546.1 MGP_NODShiLtJ_G0035746.1 mouse_genomes_project X 108996862 109248448 + MGP_NODShiLtJ_P0096546 Nhsl2 protein_coding protein_coding MGP_NODShiLtJ_T0096547.1 MGP_NODShiLtJ_G0035746.1 mouse_genomes_project X 108996862 109264706 + MGP_NODShiLtJ_P0096547 Nhsl2 protein_coding protein_coding MGP_NODShiLtJ_T0096548.1 MGP_NODShiLtJ_G0035746.1 mouse_genomes_project X 109112997 109250053 + Nhsl2 protein_coding processed_transcript MGP_NODShiLtJ_T0096549.1 MGP_NODShiLtJ_G0035746.1 mouse_genomes_project X 109158624 109250028 + MGP_NODShiLtJ_P0096549 Nhsl2 protein_coding protein_coding MGP_NODShiLtJ_T0096550.1 MGP_NODShiLtJ_G0035746.1 mouse_genomes_project X 109208651 109244138 + Nhsl2 protein_coding processed_transcript MGP_NODShiLtJ_T0096554.1 MGP_NODShiLtJ_G0035746.1 mouse_genomes_project X 109245113 109252472 + Nhsl2 protein_coding processed_transcript MGP_NODShiLtJ_T0095312.1 MGP_NODShiLtJ_G0035400.1 mouse_genomes_project X 17256401 17273519 - MGP_NODShiLtJ_P0095312 Elk1 protein_coding protein_coding MGP_NODShiLtJ_T0095313.1 MGP_NODShiLtJ_G0035400.1 mouse_genomes_project X 17262727 17273519 - Elk1 protein_coding retained_intron MGP_NODShiLtJ_T0095515.1 MGP_NODShiLtJ_G0035473.1 mouse_genomes_project X 46717645 46771964 + MGP_NODShiLtJ_P0095515 Ocrl protein_coding protein_coding MGP_NODShiLtJ_T0095516.1 MGP_NODShiLtJ_G0035473.1 mouse_genomes_project X 46717696 46763168 + MGP_NODShiLtJ_P0095516 Ocrl protein_coding protein_coding MGP_NODShiLtJ_T0095517.1 MGP_NODShiLtJ_G0035473.1 mouse_genomes_project X 46717713 46763151 + Ocrl protein_coding processed_transcript MGP_NODShiLtJ_T0095518.1 MGP_NODShiLtJ_G0035473.1 mouse_genomes_project X 46717725 46720838 + Ocrl protein_coding retained_intron MGP_NODShiLtJ_T0095519.1 MGP_NODShiLtJ_G0035473.1 mouse_genomes_project X 46718224 46769680 + MGP_NODShiLtJ_P0095519 Ocrl protein_coding protein_coding MGP_NODShiLtJ_T0095520.1 MGP_NODShiLtJ_G0035473.1 mouse_genomes_project X 46735842 46736985 + Ocrl protein_coding retained_intron MGP_NODShiLtJ_T0095521.1 MGP_NODShiLtJ_G0035473.1 mouse_genomes_project X 46744052 46754549 + MGP_NODShiLtJ_P0095521 Ocrl protein_coding protein_coding MGP_NODShiLtJ_T0016667.1 MGP_NODShiLtJ_G0014775.1 mouse_genomes_project X 157948161 157951523 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099705.1 MGP_NODShiLtJ_G0038099.1 mouse_genomes_project X 140031979 140032087 + Gm24522 snRNA snRNA MGP_NODShiLtJ_T0095678.1 MGP_NODShiLtJ_G0035531.1 mouse_genomes_project X 56869768 56873392 + MGP_NODShiLtJ_P0095678 Htatsf1 protein_coding protein_coding MGP_NODShiLtJ_T0095679.1 MGP_NODShiLtJ_G0035531.1 mouse_genomes_project X 56869800 56883370 + MGP_NODShiLtJ_P0095679 Htatsf1 protein_coding protein_coding MGP_NODShiLtJ_T0095680.1 MGP_NODShiLtJ_G0035531.1 mouse_genomes_project X 56870083 56873390 + Htatsf1 protein_coding retained_intron MGP_NODShiLtJ_T0016643.1 MGP_NODShiLtJ_G0014751.1 mouse_genomes_project X 154319047 154321586 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016527.1 MGP_NODShiLtJ_G0014635.1 mouse_genomes_project X 121874772 121875715 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100965.1 MGP_NODShiLtJ_G0039359.1 mouse_genomes_project X 129681158 129681274 - Gm26182 snoRNA snoRNA MGP_NODShiLtJ_T0016491.1 MGP_NODShiLtJ_G0014599.1 mouse_genomes_project X 114053796 114056981 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016347.1 MGP_NODShiLtJ_G0014455.1 mouse_genomes_project X 86565611 86566620 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016227.1 MGP_NODShiLtJ_G0014335.1 mouse_genomes_project X 58577238 58578641 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016121.1 MGP_NODShiLtJ_G0014229.1 mouse_genomes_project X 15911262 15911659 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102248.1 MGP_NODShiLtJ_G0040414.1 mouse_genomes_project X 77377323 77378190 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0097106.1 MGP_NODShiLtJ_G0035938.1 mouse_genomes_project X 157648147 157731997 - MGP_NODShiLtJ_P0097106 Dcx protein_coding protein_coding MGP_NODShiLtJ_T0097107.1 MGP_NODShiLtJ_G0035938.1 mouse_genomes_project X 157653327 157731890 - MGP_NODShiLtJ_P0097107 Dcx protein_coding protein_coding MGP_NODShiLtJ_T0097108.1 MGP_NODShiLtJ_G0035938.1 mouse_genomes_project X 157654398 157731810 - MGP_NODShiLtJ_P0097108 Dcx protein_coding protein_coding MGP_NODShiLtJ_T0097109.1 MGP_NODShiLtJ_G0035938.1 mouse_genomes_project X 157656079 157731905 - MGP_NODShiLtJ_P0097109 Dcx protein_coding protein_coding MGP_NODShiLtJ_T0097110.1 MGP_NODShiLtJ_G0035938.1 mouse_genomes_project X 157663598 157731736 - Dcx protein_coding retained_intron MGP_NODShiLtJ_T0097111.1 MGP_NODShiLtJ_G0035938.1 mouse_genomes_project X 157668114 157731805 - Dcx protein_coding retained_intron MGP_NODShiLtJ_T0095374.1 MGP_NODShiLtJ_G0035425.1 mouse_genomes_project X 33752387 33752959 + Ube2a protein_coding processed_transcript MGP_NODShiLtJ_T0095375.1 MGP_NODShiLtJ_G0035425.1 mouse_genomes_project X 33752818 33753855 + Ube2a protein_coding retained_intron MGP_NODShiLtJ_T0095376.1 MGP_NODShiLtJ_G0035425.1 mouse_genomes_project X 33752818 33763507 + MGP_NODShiLtJ_P0095376 Ube2a protein_coding protein_coding MGP_NODShiLtJ_T0095377.1 MGP_NODShiLtJ_G0035425.1 mouse_genomes_project X 33752828 33764181 + MGP_NODShiLtJ_P0095377 Ube2a protein_coding protein_coding MGP_NODShiLtJ_T0095378.1 MGP_NODShiLtJ_G0035425.1 mouse_genomes_project X 33752973 33763397 + MGP_NODShiLtJ_P0095378 Ube2a protein_coding protein_coding MGP_NODShiLtJ_T0095379.1 MGP_NODShiLtJ_G0035425.1 mouse_genomes_project X 33761723 33763512 + Ube2a protein_coding retained_intron MGP_NODShiLtJ_T0097034.1 MGP_NODShiLtJ_G0035913.1 mouse_genomes_project X 153438110 153487457 - MGP_NODShiLtJ_P0097034 Nup62cl protein_coding protein_coding MGP_NODShiLtJ_T0097035.1 MGP_NODShiLtJ_G0035913.1 mouse_genomes_project X 153453370 153497994 - MGP_NODShiLtJ_P0097035 Nup62cl protein_coding protein_coding MGP_NODShiLtJ_T0097036.1 MGP_NODShiLtJ_G0035913.1 mouse_genomes_project X 153463474 153498413 - MGP_NODShiLtJ_P0097036 Nup62cl protein_coding protein_coding MGP_NODShiLtJ_T0097037.1 MGP_NODShiLtJ_G0035913.1 mouse_genomes_project X 153464074 153498281 - MGP_NODShiLtJ_P0097037 Nup62cl protein_coding protein_coding MGP_NODShiLtJ_T0097038.1 MGP_NODShiLtJ_G0035913.1 mouse_genomes_project X 153470655 153498252 - MGP_NODShiLtJ_P0097038 Nup62cl protein_coding protein_coding MGP_NODShiLtJ_T0016413.1 MGP_NODShiLtJ_G0014521.1 mouse_genomes_project X 101753662 101755772 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016093.1 MGP_NODShiLtJ_G0014201.1 mouse_genomes_project X 7247340 7247570 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095154.1 MGP_NODShiLtJ_G0035355.1 mouse_genomes_project X 4461076 4496135 - MGP_NODShiLtJ_P0095154 Cybb protein_coding protein_coding MGP_NODShiLtJ_T0095155.1 MGP_NODShiLtJ_G0035355.1 mouse_genomes_project X 4473753 4496080 - MGP_NODShiLtJ_P0095155 Cybb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095156.1 MGP_NODShiLtJ_G0035355.1 mouse_genomes_project X 4476209 4478362 - Cybb protein_coding retained_intron MGP_NODShiLtJ_T0095157.1 MGP_NODShiLtJ_G0035355.1 mouse_genomes_project X 4483846 4515978 - MGP_NODShiLtJ_P0095157 Cybb protein_coding protein_coding MGP_NODShiLtJ_T0095158.1 MGP_NODShiLtJ_G0035355.1 mouse_genomes_project X 4491798 4496081 - Cybb protein_coding retained_intron MGP_NODShiLtJ_T0096425.1 MGP_NODShiLtJ_G0035719.1 mouse_genomes_project X 107397453 107398326 + MGP_NODShiLtJ_P0096425 Otud6a protein_coding protein_coding MGP_NODShiLtJ_T0016711.1 MGP_NODShiLtJ_G0014819.1 mouse_genomes_project X 168630299 168631065 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097220.1 MGP_NODShiLtJ_G0035956.1 mouse_genomes_project X 165803370 165942414 + MGP_NODShiLtJ_P0097220 protein_coding protein_coding MGP_NODShiLtJ_T0097221.1 MGP_NODShiLtJ_G0035956.1 mouse_genomes_project X 165803370 165942414 + MGP_NODShiLtJ_P0097221 protein_coding protein_coding MGP_NODShiLtJ_T0097222.1 MGP_NODShiLtJ_G0035956.1 mouse_genomes_project X 165803432 165942356 + MGP_NODShiLtJ_P0097222 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097223.1 MGP_NODShiLtJ_G0035956.1 mouse_genomes_project X 165803432 165945533 + MGP_NODShiLtJ_P0097223 protein_coding protein_coding MGP_NODShiLtJ_T0097224.1 MGP_NODShiLtJ_G0035956.1 mouse_genomes_project X 165813114 165836750 + protein_coding processed_transcript MGP_NODShiLtJ_T0097225.1 MGP_NODShiLtJ_G0035956.1 mouse_genomes_project X 165920159 165947328 + protein_coding processed_transcript MGP_NODShiLtJ_T0016330.1 MGP_NODShiLtJ_G0014438.1 mouse_genomes_project X 81688040 81688412 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096915.1 MGP_NODShiLtJ_G0035877.1 mouse_genomes_project X 149038257 149048397 + MGP_NODShiLtJ_P0096915 Tceal7 protein_coding protein_coding MGP_NODShiLtJ_T0096916.1 MGP_NODShiLtJ_G0035877.1 mouse_genomes_project X 149047050 149049110 + MGP_NODShiLtJ_P0096916 Tceal7 protein_coding protein_coding MGP_NODShiLtJ_T0016104.1 MGP_NODShiLtJ_G0014212.1 mouse_genomes_project X 8904647 8905183 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098119.1 MGP_NODShiLtJ_G0036531.1 mouse_genomes_project X 765227 765346 + n-R5s2 rRNA rRNA MGP_NODShiLtJ_T0098163.1 MGP_NODShiLtJ_G0036575.1 mouse_genomes_project X 59088683 59088915 - Gm26351 ribozyme ribozyme MGP_NODShiLtJ_T0016629.1 MGP_NODShiLtJ_G0014737.1 mouse_genomes_project X 150136945 150138896 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016639.1 MGP_NODShiLtJ_G0014747.1 mouse_genomes_project X 153307808 153309290 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096534.1 MGP_NODShiLtJ_G0035743.1 mouse_genomes_project X 108754392 108806835 + MGP_NODShiLtJ_P0096534 Ogt protein_coding protein_coding MGP_NODShiLtJ_T0096535.1 MGP_NODShiLtJ_G0035743.1 mouse_genomes_project X 108754394 108767116 + Ogt protein_coding retained_intron MGP_NODShiLtJ_T0096536.1 MGP_NODShiLtJ_G0035743.1 mouse_genomes_project X 108754396 108808246 + MGP_NODShiLtJ_P0096536 Ogt protein_coding protein_coding MGP_NODShiLtJ_T0096537.1 MGP_NODShiLtJ_G0035743.1 mouse_genomes_project X 108754426 108768557 + Ogt protein_coding processed_transcript MGP_NODShiLtJ_T0096538.1 MGP_NODShiLtJ_G0035743.1 mouse_genomes_project X 108754440 108768825 + Ogt protein_coding retained_intron MGP_NODShiLtJ_T0096539.1 MGP_NODShiLtJ_G0035743.1 mouse_genomes_project X 108754472 108767133 + Ogt protein_coding retained_intron MGP_NODShiLtJ_T0096540.1 MGP_NODShiLtJ_G0035743.1 mouse_genomes_project X 108769583 108807053 + Ogt protein_coding processed_transcript MGP_NODShiLtJ_T0096905.1 MGP_NODShiLtJ_G0035872.1 mouse_genomes_project X 148868000 148869145 - MGP_NODShiLtJ_P0096905 Bex2 protein_coding protein_coding MGP_NODShiLtJ_T0011673.1 MGP_NODShiLtJ_G0009806.1 mouse_genomes_project X 178478047 178478321 - Gm23867 misc_RNA misc_RNA MGP_NODShiLtJ_T0016605.1 MGP_NODShiLtJ_G0014713.1 mouse_genomes_project X 147191872 147192230 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096173.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77786847 77809997 - MGP_NODShiLtJ_P0096173 Mpp1 protein_coding protein_coding MGP_NODShiLtJ_T0096174.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77787762 77809825 - MGP_NODShiLtJ_P0096174 Mpp1 protein_coding protein_coding MGP_NODShiLtJ_T0096175.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77788830 77809930 - MGP_NODShiLtJ_P0096175 Mpp1 protein_coding protein_coding MGP_NODShiLtJ_T0096176.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77789467 77809835 - MGP_NODShiLtJ_P0096176 Mpp1 protein_coding protein_coding MGP_NODShiLtJ_T0096177.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77790679 77809835 - Mpp1 protein_coding processed_transcript MGP_NODShiLtJ_T0096178.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77792949 77794962 - Mpp1 protein_coding retained_intron MGP_NODShiLtJ_T0096179.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77793175 77809835 - MGP_NODShiLtJ_P0096179 Mpp1 protein_coding protein_coding MGP_NODShiLtJ_T0096180.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77798585 77809835 - MGP_NODShiLtJ_P0096180 Mpp1 protein_coding protein_coding MGP_NODShiLtJ_T0096181.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77801983 77809967 - Mpp1 protein_coding retained_intron MGP_NODShiLtJ_T0096182.1 MGP_NODShiLtJ_G0035639.1 mouse_genomes_project X 77804806 77809934 - MGP_NODShiLtJ_P0096182 Mpp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097144.1 MGP_NODShiLtJ_G0035946.1 mouse_genomes_project X 161929689 161973382 - MGP_NODShiLtJ_P0097144 Lrch2 protein_coding protein_coding MGP_NODShiLtJ_T0097145.1 MGP_NODShiLtJ_G0035946.1 mouse_genomes_project X 161929694 162024669 - MGP_NODShiLtJ_P0097145 Lrch2 protein_coding protein_coding MGP_NODShiLtJ_T0097146.1 MGP_NODShiLtJ_G0035946.1 mouse_genomes_project X 161929701 161957017 - Lrch2 protein_coding retained_intron MGP_NODShiLtJ_T0097147.1 MGP_NODShiLtJ_G0035946.1 mouse_genomes_project X 161929701 162024576 - MGP_NODShiLtJ_P0097147 Lrch2 protein_coding protein_coding MGP_NODShiLtJ_T0097148.1 MGP_NODShiLtJ_G0035946.1 mouse_genomes_project X 161932171 161984177 - MGP_NODShiLtJ_P0097148 Lrch2 protein_coding protein_coding MGP_NODShiLtJ_T0097149.1 MGP_NODShiLtJ_G0035946.1 mouse_genomes_project X 161932315 162042160 - MGP_NODShiLtJ_P0097149 Lrch2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097150.1 MGP_NODShiLtJ_G0035946.1 mouse_genomes_project X 161941986 161963610 - Lrch2 protein_coding processed_transcript MGP_NODShiLtJ_T0016335.1 MGP_NODShiLtJ_G0014443.1 mouse_genomes_project X 82143600 82143822 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016372.1 MGP_NODShiLtJ_G0014480.1 mouse_genomes_project X 94395280 94396239 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011064.1 MGP_NODShiLtJ_G0009197.1 mouse_genomes_project X 69585459 69585525 - Mir201 miRNA miRNA MGP_NODShiLtJ_T0096498.1 MGP_NODShiLtJ_G0035738.1 mouse_genomes_project X 108460295 108470665 + MGP_NODShiLtJ_P0096498 Gjb1 protein_coding protein_coding MGP_NODShiLtJ_T0096499.1 MGP_NODShiLtJ_G0035738.1 mouse_genomes_project X 108461190 108470665 + MGP_NODShiLtJ_P0096499 Gjb1 protein_coding protein_coding MGP_NODShiLtJ_T0096500.1 MGP_NODShiLtJ_G0035738.1 mouse_genomes_project X 108468771 108470665 + MGP_NODShiLtJ_P0096500 Gjb1 protein_coding protein_coding MGP_NODShiLtJ_T0100946.1 MGP_NODShiLtJ_G0039340.1 mouse_genomes_project X 72782161 72782293 + Gm22785 snoRNA snoRNA MGP_NODShiLtJ_T0016618.1 MGP_NODShiLtJ_G0014726.1 mouse_genomes_project X 149387482 149388604 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016071.1 MGP_NODShiLtJ_G0014179.1 mouse_genomes_project X 2854569 2855437 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016480.1 MGP_NODShiLtJ_G0014588.1 mouse_genomes_project X 112588332 112588827 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016708.1 MGP_NODShiLtJ_G0014816.1 mouse_genomes_project X 168146509 168146783 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095581.1 MGP_NODShiLtJ_G0035490.1 mouse_genomes_project X 48652434 48653394 + MGP_NODShiLtJ_P0095581 Olfr1320 protein_coding protein_coding MGP_NODShiLtJ_T0096323.1 MGP_NODShiLtJ_G0035693.1 mouse_genomes_project X 100555421 100604941 + MGP_NODShiLtJ_P0096323 Apoo protein_coding protein_coding MGP_NODShiLtJ_T0096324.1 MGP_NODShiLtJ_G0035693.1 mouse_genomes_project X 100555421 100610395 + MGP_NODShiLtJ_P0096324 Apoo protein_coding protein_coding MGP_NODShiLtJ_T0096325.1 MGP_NODShiLtJ_G0035693.1 mouse_genomes_project X 100555421 100604918 + MGP_NODShiLtJ_P0096325 Apoo protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098127.1 MGP_NODShiLtJ_G0036539.1 mouse_genomes_project X 79662227 79662335 - Gm26041 rRNA rRNA MGP_NODShiLtJ_T0097002.1 MGP_NODShiLtJ_G0035904.1 mouse_genomes_project X 152676202 152680553 + MGP_NODShiLtJ_P0097002 Trap1a protein_coding protein_coding MGP_NODShiLtJ_T0016449.1 MGP_NODShiLtJ_G0014557.1 mouse_genomes_project X 109860472 109861066 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102236.1 MGP_NODShiLtJ_G0040402.1 mouse_genomes_project X 32599418 32614892 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095449.1 MGP_NODShiLtJ_G0035458.1 mouse_genomes_project X 36347780 36348574 + MGP_NODShiLtJ_P0095449 Cypt14 protein_coding protein_coding MGP_NODShiLtJ_T0016205.1 MGP_NODShiLtJ_G0014313.1 mouse_genomes_project X 51041221 51041754 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096678.1 MGP_NODShiLtJ_G0035789.1 mouse_genomes_project X 115087353 115115110 + MGP_NODShiLtJ_P0096678 A630033H20Rik protein_coding protein_coding MGP_NODShiLtJ_T0096679.1 MGP_NODShiLtJ_G0035789.1 mouse_genomes_project X 115087353 115118624 + MGP_NODShiLtJ_P0096679 A630033H20Rik protein_coding protein_coding MGP_NODShiLtJ_T0096680.1 MGP_NODShiLtJ_G0035789.1 mouse_genomes_project X 115087880 115115136 + MGP_NODShiLtJ_P0096680 A630033H20Rik protein_coding protein_coding MGP_NODShiLtJ_T0096681.1 MGP_NODShiLtJ_G0035789.1 mouse_genomes_project X 115087880 115118624 + MGP_NODShiLtJ_P0096681 A630033H20Rik protein_coding protein_coding MGP_NODShiLtJ_T0096682.1 MGP_NODShiLtJ_G0035789.1 mouse_genomes_project X 115088024 115114856 + MGP_NODShiLtJ_P0096682 A630033H20Rik protein_coding protein_coding MGP_NODShiLtJ_T0096683.1 MGP_NODShiLtJ_G0035789.1 mouse_genomes_project X 115088041 115118620 + MGP_NODShiLtJ_P0096683 A630033H20Rik protein_coding protein_coding MGP_NODShiLtJ_T0016739.1 MGP_NODShiLtJ_G0014847.1 mouse_genomes_project X 174072101 174072678 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095671.1 MGP_NODShiLtJ_G0035529.1 mouse_genomes_project X 56667749 56784331 + MGP_NODShiLtJ_P0095671 protein_coding protein_coding MGP_NODShiLtJ_T0095672.1 MGP_NODShiLtJ_G0035529.1 mouse_genomes_project X 56670289 56784363 + MGP_NODShiLtJ_P0095672 protein_coding protein_coding MGP_NODShiLtJ_T0095673.1 MGP_NODShiLtJ_G0035529.1 mouse_genomes_project X 56685986 56806377 + MGP_NODShiLtJ_P0095673 protein_coding protein_coding MGP_NODShiLtJ_T0095674.1 MGP_NODShiLtJ_G0035529.1 mouse_genomes_project X 56706665 56707196 + MGP_NODShiLtJ_P0095674 protein_coding protein_coding MGP_NODShiLtJ_T0095675.1 MGP_NODShiLtJ_G0035529.1 mouse_genomes_project X 56758150 56784346 + MGP_NODShiLtJ_P0095675 protein_coding protein_coding MGP_NODShiLtJ_T0095676.1 MGP_NODShiLtJ_G0035529.1 mouse_genomes_project X 56762960 56784353 + MGP_NODShiLtJ_P0095676 protein_coding protein_coding MGP_NODShiLtJ_T0099672.1 MGP_NODShiLtJ_G0038066.1 mouse_genomes_project X 56543362 56543468 + Gm23258 snRNA snRNA MGP_NODShiLtJ_T0011014.1 MGP_NODShiLtJ_G0009147.1 mouse_genomes_project X 15249097 15249192 - Mir221 miRNA miRNA MGP_NODShiLtJ_T0011026.1 MGP_NODShiLtJ_G0009159.1 mouse_genomes_project X 50359625 50359705 - Gm23417 miRNA miRNA MGP_NODShiLtJ_T0016153.1 MGP_NODShiLtJ_G0014261.1 mouse_genomes_project X 36070163 36071110 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096838.1 MGP_NODShiLtJ_G0035850.1 mouse_genomes_project X 147084877 147097678 - MGP_NODShiLtJ_P0096838 Gla protein_coding protein_coding MGP_NODShiLtJ_T0096839.1 MGP_NODShiLtJ_G0035850.1 mouse_genomes_project X 147091841 147096853 - MGP_NODShiLtJ_P0096839 Gla protein_coding protein_coding MGP_NODShiLtJ_T0095633.1 MGP_NODShiLtJ_G0035512.1 mouse_genomes_project X 52680836 52706814 - MGP_NODShiLtJ_P0095633 Mospd1 protein_coding protein_coding MGP_NODShiLtJ_T0095634.1 MGP_NODShiLtJ_G0035512.1 mouse_genomes_project X 52680836 52706829 - MGP_NODShiLtJ_P0095634 Mospd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096670.1 MGP_NODShiLtJ_G0035785.1 mouse_genomes_project X 114413726 114447787 - MGP_NODShiLtJ_P0096670 Cysltr1 protein_coding protein_coding MGP_NODShiLtJ_T0096671.1 MGP_NODShiLtJ_G0035785.1 mouse_genomes_project X 114417265 114420306 - MGP_NODShiLtJ_P0096671 Cysltr1 protein_coding protein_coding MGP_NODShiLtJ_T0096753.1 MGP_NODShiLtJ_G0035822.1 mouse_genomes_project X 130132624 130135594 + MGP_NODShiLtJ_P0096753 Pabpc5 protein_coding protein_coding MGP_NODShiLtJ_T0016661.1 MGP_NODShiLtJ_G0014769.1 mouse_genomes_project X 156069596 156069810 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097432.1 MGP_NODShiLtJ_G0036007.1 mouse_genomes_project X 176792546 176969292 - MGP_NODShiLtJ_P0097432 Cdkl5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097433.1 MGP_NODShiLtJ_G0036007.1 mouse_genomes_project X 176792546 176969259 - MGP_NODShiLtJ_P0097433 Cdkl5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097434.1 MGP_NODShiLtJ_G0036007.1 mouse_genomes_project X 176813608 177040797 - MGP_NODShiLtJ_P0097434 Cdkl5 protein_coding protein_coding MGP_NODShiLtJ_T0097436.1 MGP_NODShiLtJ_G0036007.1 mouse_genomes_project X 176829485 176849097 - Cdkl5 protein_coding processed_transcript MGP_NODShiLtJ_T0097437.1 MGP_NODShiLtJ_G0036007.1 mouse_genomes_project X 176831726 176969259 - MGP_NODShiLtJ_P0097437 Cdkl5 protein_coding protein_coding MGP_NODShiLtJ_T0097438.1 MGP_NODShiLtJ_G0036007.1 mouse_genomes_project X 176882003 176885564 - Cdkl5 protein_coding retained_intron MGP_NODShiLtJ_T0016642.1 MGP_NODShiLtJ_G0014750.1 mouse_genomes_project X 154106317 154106771 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016070.1 MGP_NODShiLtJ_G0014178.1 mouse_genomes_project X 2852724 2853153 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095423.1 MGP_NODShiLtJ_G0035451.1 mouse_genomes_project X 35085382 35144261 - MGP_NODShiLtJ_P0095423 Tmem255a protein_coding protein_coding MGP_NODShiLtJ_T0095424.1 MGP_NODShiLtJ_G0035451.1 mouse_genomes_project X 35086115 35144271 - Tmem255a protein_coding retained_intron MGP_NODShiLtJ_T0095425.1 MGP_NODShiLtJ_G0035451.1 mouse_genomes_project X 35086115 35144271 - MGP_NODShiLtJ_P0095425 Tmem255a protein_coding protein_coding MGP_NODShiLtJ_T0095426.1 MGP_NODShiLtJ_G0035451.1 mouse_genomes_project X 35086115 35144271 - MGP_NODShiLtJ_P0095426 Tmem255a protein_coding protein_coding MGP_NODShiLtJ_T0095427.1 MGP_NODShiLtJ_G0035451.1 mouse_genomes_project X 35088301 35144133 - MGP_NODShiLtJ_P0095427 Tmem255a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095428.1 MGP_NODShiLtJ_G0035451.1 mouse_genomes_project X 35106153 35144233 - Tmem255a protein_coding processed_transcript MGP_NODShiLtJ_T0011005.1 MGP_NODShiLtJ_G0009138.1 mouse_genomes_project X 1970220 1970312 - Mir500 miRNA miRNA MGP_NODShiLtJ_T0016731.1 MGP_NODShiLtJ_G0014839.1 mouse_genomes_project X 173238811 173238943 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099715.1 MGP_NODShiLtJ_G0038109.1 mouse_genomes_project X 168544732 168544839 - Gm25793 snRNA snRNA MGP_NODShiLtJ_T0095591.1 MGP_NODShiLtJ_G0035495.1 mouse_genomes_project X 49359585 49362190 - MGP_NODShiLtJ_P0095591 protein_coding protein_coding MGP_NODShiLtJ_T0016682.1 MGP_NODShiLtJ_G0014790.1 mouse_genomes_project X 160070016 160070851 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016308.1 MGP_NODShiLtJ_G0014416.1 mouse_genomes_project X 77842607 77844206 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016128.1 MGP_NODShiLtJ_G0014236.1 mouse_genomes_project X 16733549 16733745 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016672.1 MGP_NODShiLtJ_G0014780.1 mouse_genomes_project X 158168568 158168898 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016215.1 MGP_NODShiLtJ_G0014323.1 mouse_genomes_project X 53680684 53680975 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095669.1 MGP_NODShiLtJ_G0035528.1 mouse_genomes_project X 56590949 56619110 - MGP_NODShiLtJ_P0095669 Mtap7d3 protein_coding protein_coding MGP_NODShiLtJ_T0095670.1 MGP_NODShiLtJ_G0035528.1 mouse_genomes_project X 56604441 56619098 - MGP_NODShiLtJ_P0095670 Mtap7d3 protein_coding protein_coding MGP_NODShiLtJ_T0016235.1 MGP_NODShiLtJ_G0014343.1 mouse_genomes_project X 60719005 60720938 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099678.1 MGP_NODShiLtJ_G0038072.1 mouse_genomes_project X 65783782 65783888 + Gm26111 snRNA snRNA MGP_NODShiLtJ_T0016647.1 MGP_NODShiLtJ_G0014755.1 mouse_genomes_project X 155137558 155138068 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016293.1 MGP_NODShiLtJ_G0014401.1 mouse_genomes_project X 73915804 73916019 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095916.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76324555 76341249 - MGP_NODShiLtJ_P0095916 L1cam protein_coding protein_coding MGP_NODShiLtJ_T0095917.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76324731 76352735 - MGP_NODShiLtJ_P0095917 L1cam protein_coding protein_coding MGP_NODShiLtJ_T0095918.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76325440 76341148 - MGP_NODShiLtJ_P0095918 L1cam protein_coding protein_coding MGP_NODShiLtJ_T0095919.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76325667 76327163 - L1cam protein_coding retained_intron MGP_NODShiLtJ_T0095920.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76325773 76327531 - MGP_NODShiLtJ_P0095920 L1cam protein_coding protein_coding MGP_NODShiLtJ_T0095921.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76327193 76328433 - L1cam protein_coding retained_intron MGP_NODShiLtJ_T0095922.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76327447 76328183 - L1cam protein_coding retained_intron MGP_NODShiLtJ_T0095923.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76328250 76329402 - L1cam protein_coding retained_intron MGP_NODShiLtJ_T0095924.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76329841 76330924 - L1cam protein_coding retained_intron MGP_NODShiLtJ_T0095925.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76330194 76331892 - MGP_NODShiLtJ_P0095925 L1cam protein_coding protein_coding MGP_NODShiLtJ_T0095926.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76334481 76352696 - L1cam protein_coding retained_intron MGP_NODShiLtJ_T0095927.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76337030 76368236 - L1cam protein_coding processed_transcript MGP_NODShiLtJ_T0095928.1 MGP_NODShiLtJ_G0035608.1 mouse_genomes_project X 76337107 76341639 - MGP_NODShiLtJ_P0095928 L1cam protein_coding protein_coding MGP_NODShiLtJ_T0097516.1 MGP_NODShiLtJ_G0036032.1 mouse_genomes_project X 180887626 180931612 + MGP_NODShiLtJ_P0097516 Asb9 protein_coding protein_coding MGP_NODShiLtJ_T0096923.1 MGP_NODShiLtJ_G0035880.1 mouse_genomes_project X 149349675 149365076 + MGP_NODShiLtJ_P0096923 Kir3dl2 protein_coding protein_coding MGP_NODShiLtJ_T0016613.1 MGP_NODShiLtJ_G0014721.1 mouse_genomes_project X 148467091 148468912 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016732.1 MGP_NODShiLtJ_G0014840.1 mouse_genomes_project X 173246911 173247344 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016446.1 MGP_NODShiLtJ_G0014554.1 mouse_genomes_project X 109362082 109362546 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016378.1 MGP_NODShiLtJ_G0014486.1 mouse_genomes_project X 95319158 95319408 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016745.1 MGP_NODShiLtJ_G0014853.1 mouse_genomes_project X 175494100 175494376 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102235.1 MGP_NODShiLtJ_G0040401.1 mouse_genomes_project X 4103584 4104097 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095575.1 MGP_NODShiLtJ_G0035489.1 mouse_genomes_project X 48417688 48450807 + MGP_NODShiLtJ_P0095575 Arhgap36 protein_coding protein_coding MGP_NODShiLtJ_T0095576.1 MGP_NODShiLtJ_G0035489.1 mouse_genomes_project X 48424288 48454542 + MGP_NODShiLtJ_P0095576 Arhgap36 protein_coding protein_coding MGP_NODShiLtJ_T0095577.1 MGP_NODShiLtJ_G0035489.1 mouse_genomes_project X 48424415 48454540 + MGP_NODShiLtJ_P0095577 Arhgap36 protein_coding protein_coding MGP_NODShiLtJ_T0095578.1 MGP_NODShiLtJ_G0035489.1 mouse_genomes_project X 48438918 48454540 + MGP_NODShiLtJ_P0095578 Arhgap36 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095579.1 MGP_NODShiLtJ_G0035489.1 mouse_genomes_project X 48439477 48449548 + Arhgap36 protein_coding processed_transcript MGP_NODShiLtJ_T0095580.1 MGP_NODShiLtJ_G0035489.1 mouse_genomes_project X 48448174 48449753 + Arhgap36 protein_coding processed_transcript MGP_NODShiLtJ_T0102275.1 MGP_NODShiLtJ_G0040441.1 mouse_genomes_project X 114140086 114177185 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016734.1 MGP_NODShiLtJ_G0014842.1 mouse_genomes_project X 173301791 173302125 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016699.1 MGP_NODShiLtJ_G0014807.1 mouse_genomes_project X 166150640 166150796 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096033.1 MGP_NODShiLtJ_G0035620.1 mouse_genomes_project X 76764936 76768135 + MGP_NODShiLtJ_P0096033 Emd protein_coding protein_coding MGP_NODShiLtJ_T0096034.1 MGP_NODShiLtJ_G0035620.1 mouse_genomes_project X 76765001 76767609 + MGP_NODShiLtJ_P0096034 Emd protein_coding protein_coding MGP_NODShiLtJ_T0096035.1 MGP_NODShiLtJ_G0035620.1 mouse_genomes_project X 76765010 76765935 + Emd protein_coding processed_transcript MGP_NODShiLtJ_T0096036.1 MGP_NODShiLtJ_G0035620.1 mouse_genomes_project X 76765059 76772683 + MGP_NODShiLtJ_P0096036 Emd protein_coding protein_coding MGP_NODShiLtJ_T0096037.1 MGP_NODShiLtJ_G0035620.1 mouse_genomes_project X 76765065 76767571 + MGP_NODShiLtJ_P0096037 Emd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0016123.1 MGP_NODShiLtJ_G0014231.1 mouse_genomes_project X 16050262 16050478 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094940.1 MGP_NODShiLtJ_G0035296.1 mouse_genomes_project X 701919 709399 + MGP_NODShiLtJ_P0094940 Nudt11 protein_coding protein_coding MGP_NODShiLtJ_T0099650.1 MGP_NODShiLtJ_G0038044.1 mouse_genomes_project X 4330102 4330260 + Gm25728 snRNA snRNA MGP_NODShiLtJ_T0099709.1 MGP_NODShiLtJ_G0038103.1 mouse_genomes_project X 154179013 154179120 + Gm23199 snRNA snRNA MGP_NODShiLtJ_T0011085.1 MGP_NODShiLtJ_G0009218.1 mouse_genomes_project X 109450903 109450999 - Gm26318 miRNA miRNA MGP_NODShiLtJ_T0095736.1 MGP_NODShiLtJ_G0035553.1 mouse_genomes_project X 66044440 66045811 + MGP_NODShiLtJ_P0095736 Ctag2 protein_coding protein_coding MGP_NODShiLtJ_T0005549.1 MGP_NODShiLtJ_G0004670.1 mouse_genomes_project X 170884516 170885089 + Gm15156 antisense antisense MGP_NODShiLtJ_T0018511.1 MGP_NODShiLtJ_G0015659.1 mouse_genomes_project X 149593026 149610816 + BC065397 processed_transcript processed_transcript MGP_NODShiLtJ_T0018512.1 MGP_NODShiLtJ_G0015659.1 mouse_genomes_project X 149593048 149612515 + BC065397 processed_transcript processed_transcript MGP_NODShiLtJ_T0018513.1 MGP_NODShiLtJ_G0015659.1 mouse_genomes_project X 149593060 149595795 + BC065397 processed_transcript processed_transcript MGP_NODShiLtJ_T0018514.1 MGP_NODShiLtJ_G0015659.1 mouse_genomes_project X 149593090 149610794 + BC065397 processed_transcript processed_transcript MGP_NODShiLtJ_T0018515.1 MGP_NODShiLtJ_G0015659.1 mouse_genomes_project X 149594196 149654302 + BC065397 processed_transcript processed_transcript MGP_NODShiLtJ_T0018516.1 MGP_NODShiLtJ_G0015659.1 mouse_genomes_project X 149594620 149610831 + BC065397 processed_transcript processed_transcript MGP_NODShiLtJ_T0018517.1 MGP_NODShiLtJ_G0015659.1 mouse_genomes_project X 149618246 149654311 + BC065397 processed_transcript processed_transcript MGP_NODShiLtJ_T0016292.1 MGP_NODShiLtJ_G0014400.1 mouse_genomes_project X 73649175 73649480 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011672.1 MGP_NODShiLtJ_G0009805.1 mouse_genomes_project X 167785696 167786006 - Gm26035 misc_RNA misc_RNA MGP_NODShiLtJ_T0096992.1 MGP_NODShiLtJ_G0035901.1 mouse_genomes_project X 152396502 152403758 + MGP_NODShiLtJ_P0096992 4930513O06Rik protein_coding protein_coding MGP_NODShiLtJ_T0095138.1 MGP_NODShiLtJ_G0035342.1 mouse_genomes_project X 3125954 3128980 + MGP_NODShiLtJ_P0095138 Slc38a5 protein_coding protein_coding MGP_NODShiLtJ_T0095139.1 MGP_NODShiLtJ_G0035342.1 mouse_genomes_project X 3125972 3136223 + MGP_NODShiLtJ_P0095139 Slc38a5 protein_coding protein_coding MGP_NODShiLtJ_T0095140.1 MGP_NODShiLtJ_G0035342.1 mouse_genomes_project X 3127483 3136223 + MGP_NODShiLtJ_P0095140 Slc38a5 protein_coding protein_coding MGP_NODShiLtJ_T0095141.1 MGP_NODShiLtJ_G0035342.1 mouse_genomes_project X 3127737 3136218 + MGP_NODShiLtJ_P0095141 Slc38a5 protein_coding protein_coding MGP_NODShiLtJ_T0101414.1 MGP_NODShiLtJ_G0039612.1 mouse_genomes_project X 165365005 165405273 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101415.1 MGP_NODShiLtJ_G0039612.1 mouse_genomes_project X 165397271 165399495 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101416.1 MGP_NODShiLtJ_G0039612.1 mouse_genomes_project X 165400884 165405386 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0016769.1 MGP_NODShiLtJ_G0014877.1 mouse_genomes_project X 180320763 180320939 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011055.1 MGP_NODShiLtJ_G0009188.1 mouse_genomes_project X 68109898 68109976 - Mir878 miRNA miRNA MGP_NODShiLtJ_T0009305.1 MGP_NODShiLtJ_G0007462.1 mouse_genomes_project X 61236294 61282671 + Gm14664 lincRNA lincRNA MGP_NODShiLtJ_T0016131.1 MGP_NODShiLtJ_G0014239.1 mouse_genomes_project X 17234110 17234309 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016405.1 MGP_NODShiLtJ_G0014513.1 mouse_genomes_project X 100872444 100872770 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096134.1 MGP_NODShiLtJ_G0035633.1 mouse_genomes_project X 76934132 76955105 - MGP_NODShiLtJ_P0096134 G6pdx protein_coding protein_coding MGP_NODShiLtJ_T0096135.1 MGP_NODShiLtJ_G0035633.1 mouse_genomes_project X 76935508 76954787 - MGP_NODShiLtJ_P0096135 G6pdx protein_coding protein_coding MGP_NODShiLtJ_T0096136.1 MGP_NODShiLtJ_G0035633.1 mouse_genomes_project X 76938453 76954760 - G6pdx protein_coding processed_transcript MGP_NODShiLtJ_T0096143.1 MGP_NODShiLtJ_G0035633.1 mouse_genomes_project X 76953597 76954791 - G6pdx protein_coding retained_intron MGP_NODShiLtJ_T0016344.1 MGP_NODShiLtJ_G0014452.1 mouse_genomes_project X 86146304 86146590 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096152.1 MGP_NODShiLtJ_G0035634.1 mouse_genomes_project X 77124898 77125834 - MGP_NODShiLtJ_P0096152 Olfr1326-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0098129.1 MGP_NODShiLtJ_G0036541.1 mouse_genomes_project X 90914622 90914741 - n-R5s10 rRNA rRNA MGP_NODShiLtJ_T0016503.1 MGP_NODShiLtJ_G0014611.1 mouse_genomes_project X 115412924 115413239 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095551.1 MGP_NODShiLtJ_G0035482.1 mouse_genomes_project X 47400113 47411060 + MGP_NODShiLtJ_P0095551 Rab33a protein_coding protein_coding MGP_NODShiLtJ_T0018525.1 MGP_NODShiLtJ_G0015662.1 mouse_genomes_project X 167924604 167971056 + 9530051G07Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0009318.1 MGP_NODShiLtJ_G0007473.1 mouse_genomes_project X 106274861 106315212 - Gm14812 lincRNA lincRNA MGP_NODShiLtJ_T0097315.1 MGP_NODShiLtJ_G0035977.1 mouse_genomes_project X 168661112 168672334 - MGP_NODShiLtJ_P0097315 Kctd12b protein_coding protein_coding MGP_NODShiLtJ_T0097316.1 MGP_NODShiLtJ_G0035977.1 mouse_genomes_project X 168661112 168672223 - MGP_NODShiLtJ_P0097316 Kctd12b protein_coding protein_coding MGP_NODShiLtJ_T0016267.1 MGP_NODShiLtJ_G0014375.1 mouse_genomes_project X 68061839 68063032 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016294.1 MGP_NODShiLtJ_G0014402.1 mouse_genomes_project X 74986808 74987144 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016253.1 MGP_NODShiLtJ_G0014361.1 mouse_genomes_project X 62821418 62824545 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016295.1 MGP_NODShiLtJ_G0014403.1 mouse_genomes_project X 75698564 75698996 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102286.1 MGP_NODShiLtJ_G0040452.1 mouse_genomes_project X 174945950 174952461 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095341.1 MGP_NODShiLtJ_G0035411.1 mouse_genomes_project X 20439538 20511681 + protein_coding retained_intron MGP_NODShiLtJ_T0095342.1 MGP_NODShiLtJ_G0035411.1 mouse_genomes_project X 20439620 20518005 + MGP_NODShiLtJ_P0095342 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095343.1 MGP_NODShiLtJ_G0035411.1 mouse_genomes_project X 20439924 20560723 + MGP_NODShiLtJ_P0095343 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095344.1 MGP_NODShiLtJ_G0035411.1 mouse_genomes_project X 20536373 20542418 + protein_coding retained_intron MGP_NODShiLtJ_T0095429.1 MGP_NODShiLtJ_G0035452.1 mouse_genomes_project X 35225163 35246677 + MGP_NODShiLtJ_P0095429 Atp1b4 protein_coding protein_coding MGP_NODShiLtJ_T0095430.1 MGP_NODShiLtJ_G0035452.1 mouse_genomes_project X 35225163 35246677 + MGP_NODShiLtJ_P0095430 Atp1b4 protein_coding protein_coding MGP_NODShiLtJ_T0018452.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49597250 49606885 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018453.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49597250 49712334 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018454.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49597257 49604873 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018455.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49600143 49614040 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018456.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49600352 49603030 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018457.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49601661 49647470 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018458.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49695028 49712376 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018459.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49703523 49712384 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018460.1 MGP_NODShiLtJ_G0015641.1 mouse_genomes_project X 49703523 49712394 - processed_transcript processed_transcript MGP_NODShiLtJ_T0016724.1 MGP_NODShiLtJ_G0014832.1 mouse_genomes_project X 172184407 172184876 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016730.1 MGP_NODShiLtJ_G0014838.1 mouse_genomes_project X 173238493 173238628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096608.1 MGP_NODShiLtJ_G0035770.1 mouse_genomes_project X 112074369 112101681 + MGP_NODShiLtJ_P0096608 Uprt protein_coding protein_coding MGP_NODShiLtJ_T0095239.1 MGP_NODShiLtJ_G0035379.1 mouse_genomes_project X 12512212 12640372 - MGP_NODShiLtJ_P0095239 Maob protein_coding protein_coding MGP_NODShiLtJ_T0095240.1 MGP_NODShiLtJ_G0035379.1 mouse_genomes_project X 12512969 12640281 - MGP_NODShiLtJ_P0095240 Maob protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095241.1 MGP_NODShiLtJ_G0035379.1 mouse_genomes_project X 12521727 12640281 - MGP_NODShiLtJ_P0095241 Maob protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095242.1 MGP_NODShiLtJ_G0035379.1 mouse_genomes_project X 12544916 12640326 - MGP_NODShiLtJ_P0095242 Maob protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095685.1 MGP_NODShiLtJ_G0035533.1 mouse_genomes_project X 57058437 57069992 + MGP_NODShiLtJ_P0095685 Cd40lg protein_coding protein_coding MGP_NODShiLtJ_T0096784.1 MGP_NODShiLtJ_G0035836.1 mouse_genomes_project X 146380199 146432217 - MGP_NODShiLtJ_P0096784 Sytl4 protein_coding protein_coding MGP_NODShiLtJ_T0096785.1 MGP_NODShiLtJ_G0035836.1 mouse_genomes_project X 146391592 146432285 - MGP_NODShiLtJ_P0096785 Sytl4 protein_coding protein_coding MGP_NODShiLtJ_T0096786.1 MGP_NODShiLtJ_G0035836.1 mouse_genomes_project X 146395450 146411443 - Sytl4 protein_coding processed_transcript MGP_NODShiLtJ_T0096787.1 MGP_NODShiLtJ_G0035836.1 mouse_genomes_project X 146397498 146432282 - MGP_NODShiLtJ_P0096787 Sytl4 protein_coding protein_coding MGP_NODShiLtJ_T0011659.1 MGP_NODShiLtJ_G0009792.1 mouse_genomes_project X 111080574 111080701 + Gm27285 misc_RNA misc_RNA MGP_NODShiLtJ_T0005543.1 MGP_NODShiLtJ_G0004667.1 mouse_genomes_project X 110879654 110937532 + Tsix antisense antisense MGP_NODShiLtJ_T0016236.1 MGP_NODShiLtJ_G0014344.1 mouse_genomes_project X 60761041 60761483 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016084.1 MGP_NODShiLtJ_G0014192.1 mouse_genomes_project X 4363472 4363845 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016182.1 MGP_NODShiLtJ_G0014290.1 mouse_genomes_project X 43907029 43907854 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097531.1 MGP_NODShiLtJ_G0036036.1 mouse_genomes_project X 181630341 181874102 - MGP_NODShiLtJ_P0097531 Glra2 protein_coding protein_coding MGP_NODShiLtJ_T0101244.1 MGP_NODShiLtJ_G0039534.1 mouse_genomes_project X 186216582 186218277 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0096384.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105343534 105721066 - MGP_NODShiLtJ_P0096384 Ophn1 protein_coding protein_coding MGP_NODShiLtJ_T0096385.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105348470 105720862 - MGP_NODShiLtJ_P0096385 Ophn1 protein_coding protein_coding MGP_NODShiLtJ_T0096386.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105348476 105368441 - MGP_NODShiLtJ_P0096386 Ophn1 protein_coding protein_coding MGP_NODShiLtJ_T0096387.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105353788 105368387 - Ophn1 protein_coding processed_transcript MGP_NODShiLtJ_T0096388.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105530858 105721106 - Ophn1 protein_coding retained_intron MGP_NODShiLtJ_T0096389.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105531086 105721066 - Ophn1 protein_coding retained_intron MGP_NODShiLtJ_T0096390.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105552390 105721066 - MGP_NODShiLtJ_P0096390 Ophn1 protein_coding protein_coding MGP_NODShiLtJ_T0096391.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105626545 105720690 - Ophn1 protein_coding retained_intron MGP_NODShiLtJ_T0096392.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105703570 105720465 - Ophn1 protein_coding processed_transcript MGP_NODShiLtJ_T0096393.1 MGP_NODShiLtJ_G0035711.1 mouse_genomes_project X 105717860 105720706 - Ophn1 protein_coding retained_intron MGP_NODShiLtJ_T0095077.1 MGP_NODShiLtJ_G0035330.1 mouse_genomes_project X 2727143 2731511 - MGP_NODShiLtJ_P0095077 Eras protein_coding protein_coding MGP_NODShiLtJ_T0016561.1 MGP_NODShiLtJ_G0014669.1 mouse_genomes_project X 129567088 129567826 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016396.1 MGP_NODShiLtJ_G0014504.1 mouse_genomes_project X 100145811 100146578 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016148.1 MGP_NODShiLtJ_G0014256.1 mouse_genomes_project X 33712355 33712512 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016149.1 MGP_NODShiLtJ_G0014257.1 mouse_genomes_project X 33923814 33925537 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016058.1 MGP_NODShiLtJ_G0014166.1 mouse_genomes_project X 505315 507139 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016428.1 MGP_NODShiLtJ_G0014536.1 mouse_genomes_project X 105926601 105927603 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009351.1 MGP_NODShiLtJ_G0007492.1 mouse_genomes_project X 167032343 167059145 - Kantr lincRNA lincRNA MGP_NODShiLtJ_T0009352.1 MGP_NODShiLtJ_G0007492.1 mouse_genomes_project X 167032495 167059145 - Kantr lincRNA lincRNA MGP_NODShiLtJ_T0009353.1 MGP_NODShiLtJ_G0007492.1 mouse_genomes_project X 167032495 167059145 - Kantr lincRNA lincRNA MGP_NODShiLtJ_T0009354.1 MGP_NODShiLtJ_G0007492.1 mouse_genomes_project X 167032572 167059113 - Kantr lincRNA lincRNA MGP_NODShiLtJ_T0009355.1 MGP_NODShiLtJ_G0007492.1 mouse_genomes_project X 167046949 167049674 - Kantr lincRNA lincRNA MGP_NODShiLtJ_T0009356.1 MGP_NODShiLtJ_G0007492.1 mouse_genomes_project X 167047045 167059120 - Kantr lincRNA lincRNA MGP_NODShiLtJ_T0009357.1 MGP_NODShiLtJ_G0007492.1 mouse_genomes_project X 167051459 167059120 - Kantr lincRNA lincRNA MGP_NODShiLtJ_T0100953.1 MGP_NODShiLtJ_G0039347.1 mouse_genomes_project X 79714396 79714535 + Gm23280 snoRNA snoRNA MGP_NODShiLtJ_T0016231.1 MGP_NODShiLtJ_G0014339.1 mouse_genomes_project X 59940663 59941720 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016632.1 MGP_NODShiLtJ_G0014740.1 mouse_genomes_project X 151671052 151672295 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102278.1 MGP_NODShiLtJ_G0040444.1 mouse_genomes_project X 149322735 149324650 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100977.1 MGP_NODShiLtJ_G0039371.1 mouse_genomes_project X 161345414 161345542 + Snora35 snoRNA snoRNA MGP_NODShiLtJ_T0011666.1 MGP_NODShiLtJ_G0009799.1 mouse_genomes_project X 149555953 149556246 + Gm23068 misc_RNA misc_RNA MGP_NODShiLtJ_T0096582.1 MGP_NODShiLtJ_G0035756.1 mouse_genomes_project X 110084722 110091702 + MGP_NODShiLtJ_P0096582 protein_coding protein_coding MGP_NODShiLtJ_T0096584.1 MGP_NODShiLtJ_G0035756.1 mouse_genomes_project X 110085982 110087676 + MGP_NODShiLtJ_P0096584 protein_coding protein_coding MGP_NODShiLtJ_T0096890.1 MGP_NODShiLtJ_G0035869.1 mouse_genomes_project X 148464647 148469237 + MGP_NODShiLtJ_P0096890 Armcx5 protein_coding protein_coding MGP_NODShiLtJ_T0096895.1 MGP_NODShiLtJ_G0035869.1 mouse_genomes_project X 148464649 148467321 + Armcx5 protein_coding retained_intron MGP_NODShiLtJ_T0018446.1 MGP_NODShiLtJ_G0015638.1 mouse_genomes_project X 8404608 8407800 + 5730405O15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018447.1 MGP_NODShiLtJ_G0015638.1 mouse_genomes_project X 8404644 8407887 + 5730405O15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0097550.1 MGP_NODShiLtJ_G0036039.1 mouse_genomes_project X 182977991 183023095 - MGP_NODShiLtJ_P0097550 Ofd1 protein_coding protein_coding MGP_NODShiLtJ_T0095217.1 MGP_NODShiLtJ_G0035371.1 mouse_genomes_project X 8880317 8903463 + MGP_NODShiLtJ_P0095217 Nyx protein_coding protein_coding MGP_NODShiLtJ_T0016066.1 MGP_NODShiLtJ_G0014174.1 mouse_genomes_project X 2312583 2312878 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097326.1 MGP_NODShiLtJ_G0035982.1 mouse_genomes_project X 169674127 169674920 - MGP_NODShiLtJ_P0097326 Samt2 protein_coding protein_coding MGP_NODShiLtJ_T0016322.1 MGP_NODShiLtJ_G0014430.1 mouse_genomes_project X 80600151 80600751 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016580.1 MGP_NODShiLtJ_G0014688.1 mouse_genomes_project X 137986197 137986452 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095397.1 MGP_NODShiLtJ_G0035434.1 mouse_genomes_project X 34081517 34082740 + MGP_NODShiLtJ_P0095397 Rnf113a1 protein_coding protein_coding MGP_NODShiLtJ_T0011028.1 MGP_NODShiLtJ_G0009161.1 mouse_genomes_project X 51665795 51665904 - Mir717 miRNA miRNA MGP_NODShiLtJ_T0097300.1 MGP_NODShiLtJ_G0035969.1 mouse_genomes_project X 167623466 167637404 + Gpr143 protein_coding processed_transcript MGP_NODShiLtJ_T0097301.1 MGP_NODShiLtJ_G0035969.1 mouse_genomes_project X 167623531 167651590 + MGP_NODShiLtJ_P0097301 Gpr143 protein_coding protein_coding MGP_NODShiLtJ_T0097302.1 MGP_NODShiLtJ_G0035969.1 mouse_genomes_project X 167623563 167632279 + Gpr143 protein_coding retained_intron MGP_NODShiLtJ_T0011106.1 MGP_NODShiLtJ_G0009239.1 mouse_genomes_project X 161350363 161350468 + Gm22650 miRNA miRNA MGP_NODShiLtJ_T0100950.1 MGP_NODShiLtJ_G0039344.1 mouse_genomes_project X 77189093 77189228 + Gm26417 snoRNA snoRNA MGP_NODShiLtJ_T0016459.1 MGP_NODShiLtJ_G0014567.1 mouse_genomes_project X 110733822 110734888 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096840.1 MGP_NODShiLtJ_G0035851.1 mouse_genomes_project X 147097823 147103791 + MGP_NODShiLtJ_P0096840 protein_coding protein_coding MGP_NODShiLtJ_T0016537.1 MGP_NODShiLtJ_G0014645.1 mouse_genomes_project X 124259612 124260071 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016069.1 MGP_NODShiLtJ_G0014177.1 mouse_genomes_project X 2754415 2755128 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016089.1 MGP_NODShiLtJ_G0014197.1 mouse_genomes_project X 6832022 6832238 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016337.1 MGP_NODShiLtJ_G0014445.1 mouse_genomes_project X 83392609 83393311 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096609.1 MGP_NODShiLtJ_G0035771.1 mouse_genomes_project X 112131289 112280520 - MGP_NODShiLtJ_P0096609 Zdhhc15 protein_coding protein_coding MGP_NODShiLtJ_T0095419.1 MGP_NODShiLtJ_G0035449.1 mouse_genomes_project X 34994132 35005749 + MGP_NODShiLtJ_P0095419 Rhox13 protein_coding protein_coding MGP_NODShiLtJ_T0095593.1 MGP_NODShiLtJ_G0035497.1 mouse_genomes_project X 49926849 49980765 + MGP_NODShiLtJ_P0095593 Stk26 protein_coding protein_coding MGP_NODShiLtJ_T0095594.1 MGP_NODShiLtJ_G0035497.1 mouse_genomes_project X 49927243 49967474 + Stk26 protein_coding retained_intron MGP_NODShiLtJ_T0095595.1 MGP_NODShiLtJ_G0035497.1 mouse_genomes_project X 49927243 49980765 + MGP_NODShiLtJ_P0095595 Stk26 protein_coding protein_coding MGP_NODShiLtJ_T0095596.1 MGP_NODShiLtJ_G0035497.1 mouse_genomes_project X 49965787 49979248 + Stk26 protein_coding retained_intron MGP_NODShiLtJ_T0011051.1 MGP_NODShiLtJ_G0009184.1 mouse_genomes_project X 68101072 68101139 - Mir471 miRNA miRNA MGP_NODShiLtJ_T0016133.1 MGP_NODShiLtJ_G0014241.1 mouse_genomes_project X 17914902 17916315 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095740.1 MGP_NODShiLtJ_G0035556.1 mouse_genomes_project X 69219838 69233232 + MGP_NODShiLtJ_P0095740 protein_coding protein_coding MGP_NODShiLtJ_T0011664.1 MGP_NODShiLtJ_G0009797.1 mouse_genomes_project X 144880675 144880878 + Gm22143 misc_RNA misc_RNA MGP_NODShiLtJ_T0011043.1 MGP_NODShiLtJ_G0009176.1 mouse_genomes_project X 59106878 59106957 - Mir504 miRNA miRNA MGP_NODShiLtJ_T0096730.1 MGP_NODShiLtJ_G0035811.1 mouse_genomes_project X 121358247 121416243 + MGP_NODShiLtJ_P0096730 2010106E10Rik protein_coding protein_coding MGP_NODShiLtJ_T0096731.1 MGP_NODShiLtJ_G0035811.1 mouse_genomes_project X 121358248 121416233 + MGP_NODShiLtJ_P0096731 2010106E10Rik protein_coding protein_coding MGP_NODShiLtJ_T0099721.1 MGP_NODShiLtJ_G0038115.1 mouse_genomes_project X 179651637 179651757 - Gm26007 snRNA snRNA MGP_NODShiLtJ_T0016132.1 MGP_NODShiLtJ_G0014240.1 mouse_genomes_project X 17493049 17493846 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095619.1 MGP_NODShiLtJ_G0035506.1 mouse_genomes_project X 52045798 52054059 + MGP_NODShiLtJ_P0095619 Ccdc160 protein_coding protein_coding MGP_NODShiLtJ_T0005528.1 MGP_NODShiLtJ_G0004654.1 mouse_genomes_project X 71897953 72154894 - antisense antisense MGP_NODShiLtJ_T0095366.1 MGP_NODShiLtJ_G0035421.1 mouse_genomes_project X 33474772 33513680 - MGP_NODShiLtJ_P0095366 Akap17b protein_coding protein_coding MGP_NODShiLtJ_T0095367.1 MGP_NODShiLtJ_G0035421.1 mouse_genomes_project X 33478337 33513381 - MGP_NODShiLtJ_P0095367 Akap17b protein_coding protein_coding MGP_NODShiLtJ_T0016436.1 MGP_NODShiLtJ_G0014544.1 mouse_genomes_project X 108309105 108309374 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016433.1 MGP_NODShiLtJ_G0014541.1 mouse_genomes_project X 107297896 107299051 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016188.1 MGP_NODShiLtJ_G0014296.1 mouse_genomes_project X 46156081 46157047 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096959.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149867981 149931771 - MGP_NODShiLtJ_P0096959 Slc25a53 protein_coding protein_coding MGP_NODShiLtJ_T0096960.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149867987 149931749 - MGP_NODShiLtJ_P0096960 Slc25a53 protein_coding protein_coding MGP_NODShiLtJ_T0096961.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149867987 149884267 - MGP_NODShiLtJ_P0096961 Slc25a53 protein_coding protein_coding MGP_NODShiLtJ_T0096962.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149870273 149884292 - MGP_NODShiLtJ_P0096962 Slc25a53 protein_coding protein_coding MGP_NODShiLtJ_T0096963.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149870415 149884324 - MGP_NODShiLtJ_P0096963 Slc25a53 protein_coding protein_coding MGP_NODShiLtJ_T0096968.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149892738 149923548 - Slc25a53 protein_coding retained_intron MGP_NODShiLtJ_T0096969.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149892775 149931773 - Slc25a53 protein_coding processed_transcript MGP_NODShiLtJ_T0096970.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149894502 149931503 - Slc25a53 protein_coding processed_transcript MGP_NODShiLtJ_T0096971.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149894503 149931743 - Slc25a53 protein_coding processed_transcript MGP_NODShiLtJ_T0096972.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149895271 149910789 - Slc25a53 protein_coding processed_transcript MGP_NODShiLtJ_T0096973.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149908302 149931770 - Slc25a53 protein_coding processed_transcript MGP_NODShiLtJ_T0096974.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149923470 149931495 - Slc25a53 protein_coding processed_transcript MGP_NODShiLtJ_T0096975.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149925263 149931773 - Slc25a53 protein_coding retained_intron MGP_NODShiLtJ_T0096976.1 MGP_NODShiLtJ_G0035892.1 mouse_genomes_project X 149925872 149931479 - Slc25a53 protein_coding processed_transcript MGP_NODShiLtJ_T0016641.1 MGP_NODShiLtJ_G0014749.1 mouse_genomes_project X 153907520 153908349 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005533.1 MGP_NODShiLtJ_G0004659.1 mouse_genomes_project X 79070592 79071176 - Gm14707 antisense antisense MGP_NODShiLtJ_T0016261.1 MGP_NODShiLtJ_G0014369.1 mouse_genomes_project X 65718932 65719790 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016313.1 MGP_NODShiLtJ_G0014421.1 mouse_genomes_project X 78780627 78781065 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097409.1 MGP_NODShiLtJ_G0036001.1 mouse_genomes_project X 175916132 176075308 + MGP_NODShiLtJ_P0097409 protein_coding protein_coding MGP_NODShiLtJ_T0016387.1 MGP_NODShiLtJ_G0014495.1 mouse_genomes_project X 97666002 97666197 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016579.1 MGP_NODShiLtJ_G0014687.1 mouse_genomes_project X 137930506 137932543 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018477.1 MGP_NODShiLtJ_G0015647.1 mouse_genomes_project X 78437932 78440633 - processed_transcript processed_transcript MGP_NODShiLtJ_T0095765.1 MGP_NODShiLtJ_G0035564.1 mouse_genomes_project X 72419670 72423210 + MGP_NODShiLtJ_P0095765 1110012L19Rik protein_coding protein_coding MGP_NODShiLtJ_T0016095.1 MGP_NODShiLtJ_G0014203.1 mouse_genomes_project X 7753825 7754247 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096320.1 MGP_NODShiLtJ_G0035692.1 mouse_genomes_project X 100543374 100555045 - MGP_NODShiLtJ_P0096320 Fam90a1b protein_coding protein_coding MGP_NODShiLtJ_T0096321.1 MGP_NODShiLtJ_G0035692.1 mouse_genomes_project X 100544193 100554039 - MGP_NODShiLtJ_P0096321 Fam90a1b protein_coding protein_coding MGP_NODShiLtJ_T0096322.1 MGP_NODShiLtJ_G0035692.1 mouse_genomes_project X 100545477 100554318 - MGP_NODShiLtJ_P0096322 Fam90a1b protein_coding protein_coding MGP_NODShiLtJ_T0097280.1 MGP_NODShiLtJ_G0035964.1 mouse_genomes_project X 166963869 167006843 + MGP_NODShiLtJ_P0097280 Kdm5c protein_coding protein_coding MGP_NODShiLtJ_T0097281.1 MGP_NODShiLtJ_G0035964.1 mouse_genomes_project X 166964078 167007608 + MGP_NODShiLtJ_P0097281 Kdm5c protein_coding protein_coding MGP_NODShiLtJ_T0097282.1 MGP_NODShiLtJ_G0035964.1 mouse_genomes_project X 166964103 166977583 + Kdm5c protein_coding retained_intron MGP_NODShiLtJ_T0097283.1 MGP_NODShiLtJ_G0035964.1 mouse_genomes_project X 166964121 167006847 + MGP_NODShiLtJ_P0097283 Kdm5c protein_coding protein_coding MGP_NODShiLtJ_T0097284.1 MGP_NODShiLtJ_G0035964.1 mouse_genomes_project X 167002880 167004631 + MGP_NODShiLtJ_P0097284 Kdm5c protein_coding protein_coding MGP_NODShiLtJ_T0097285.1 MGP_NODShiLtJ_G0035964.1 mouse_genomes_project X 167004987 167006471 + MGP_NODShiLtJ_P0097285 Kdm5c protein_coding protein_coding MGP_NODShiLtJ_T0016450.1 MGP_NODShiLtJ_G0014558.1 mouse_genomes_project X 110338062 110338820 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095441.1 MGP_NODShiLtJ_G0035455.1 mouse_genomes_project X 35542507 35557372 + Mcts1 protein_coding processed_transcript MGP_NODShiLtJ_T0095442.1 MGP_NODShiLtJ_G0035455.1 mouse_genomes_project X 35542584 35558965 + MGP_NODShiLtJ_P0095442 Mcts1 protein_coding protein_coding MGP_NODShiLtJ_T0095443.1 MGP_NODShiLtJ_G0035455.1 mouse_genomes_project X 35543228 35551020 + Mcts1 protein_coding processed_transcript MGP_NODShiLtJ_T0095444.1 MGP_NODShiLtJ_G0035455.1 mouse_genomes_project X 35554261 35558965 + Mcts1 protein_coding processed_transcript MGP_NODShiLtJ_T0095445.1 MGP_NODShiLtJ_G0035455.1 mouse_genomes_project X 35555341 35558939 + Mcts1 protein_coding processed_transcript MGP_NODShiLtJ_T0095686.1 MGP_NODShiLtJ_G0035534.1 mouse_genomes_project X 57077189 57087324 - Arhgef6 protein_coding retained_intron MGP_NODShiLtJ_T0095687.1 MGP_NODShiLtJ_G0035534.1 mouse_genomes_project X 57077189 57188520 - MGP_NODShiLtJ_P0095687 Arhgef6 protein_coding protein_coding MGP_NODShiLtJ_T0095688.1 MGP_NODShiLtJ_G0035534.1 mouse_genomes_project X 57079144 57128794 - MGP_NODShiLtJ_P0095688 Arhgef6 protein_coding protein_coding MGP_NODShiLtJ_T0095689.1 MGP_NODShiLtJ_G0035534.1 mouse_genomes_project X 57085664 57098113 - MGP_NODShiLtJ_P0095689 Arhgef6 protein_coding protein_coding MGP_NODShiLtJ_T0095690.1 MGP_NODShiLtJ_G0035534.1 mouse_genomes_project X 57095754 57175537 - MGP_NODShiLtJ_P0095690 Arhgef6 protein_coding protein_coding MGP_NODShiLtJ_T0095691.1 MGP_NODShiLtJ_G0035534.1 mouse_genomes_project X 57119442 57175539 - Arhgef6 protein_coding retained_intron MGP_NODShiLtJ_T0095692.1 MGP_NODShiLtJ_G0035534.1 mouse_genomes_project X 57147757 57150091 - Arhgef6 protein_coding processed_transcript MGP_NODShiLtJ_T0095693.1 MGP_NODShiLtJ_G0035534.1 mouse_genomes_project X 57185694 57188297 - Arhgef6 protein_coding retained_intron MGP_NODShiLtJ_T0009366.1 MGP_NODShiLtJ_G0007499.1 mouse_genomes_project X 183704089 183719872 - Gm15232 lincRNA lincRNA MGP_NODShiLtJ_T0097339.1 MGP_NODShiLtJ_G0035986.1 mouse_genomes_project X 170530721 170548123 - MGP_NODShiLtJ_P0097339 Prdx4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097340.1 MGP_NODShiLtJ_G0035986.1 mouse_genomes_project X 170530722 170548228 - MGP_NODShiLtJ_P0097340 Prdx4 protein_coding protein_coding MGP_NODShiLtJ_T0097341.1 MGP_NODShiLtJ_G0035986.1 mouse_genomes_project X 170537053 170550561 - MGP_NODShiLtJ_P0097341 Prdx4 protein_coding protein_coding MGP_NODShiLtJ_T0097342.1 MGP_NODShiLtJ_G0035986.1 mouse_genomes_project X 170546551 170548235 - Prdx4 protein_coding processed_transcript MGP_NODShiLtJ_T0096652.1 MGP_NODShiLtJ_G0035780.1 mouse_genomes_project X 113750863 113858105 + MGP_NODShiLtJ_P0096652 Atp7a protein_coding protein_coding MGP_NODShiLtJ_T0096653.1 MGP_NODShiLtJ_G0035780.1 mouse_genomes_project X 113750909 113858114 + MGP_NODShiLtJ_P0096653 Atp7a protein_coding protein_coding MGP_NODShiLtJ_T0096654.1 MGP_NODShiLtJ_G0035780.1 mouse_genomes_project X 113841030 113851765 + Atp7a protein_coding processed_transcript MGP_NODShiLtJ_T0096655.1 MGP_NODShiLtJ_G0035780.1 mouse_genomes_project X 113848692 113855633 + Atp7a protein_coding retained_intron MGP_NODShiLtJ_T0095035.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2587645 2619326 + MGP_NODShiLtJ_P0095035 Gripap1 protein_coding protein_coding MGP_NODShiLtJ_T0095036.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2587874 2611238 + MGP_NODShiLtJ_P0095036 Gripap1 protein_coding protein_coding MGP_NODShiLtJ_T0095037.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2587875 2619322 + MGP_NODShiLtJ_P0095037 Gripap1 protein_coding protein_coding MGP_NODShiLtJ_T0095038.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2587886 2592429 + Gripap1 protein_coding retained_intron MGP_NODShiLtJ_T0095039.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2587888 2619322 + MGP_NODShiLtJ_P0095039 Gripap1 protein_coding protein_coding MGP_NODShiLtJ_T0095040.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2587892 2611238 + MGP_NODShiLtJ_P0095040 Gripap1 protein_coding protein_coding MGP_NODShiLtJ_T0095041.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2587898 2618715 + Gripap1 protein_coding processed_transcript MGP_NODShiLtJ_T0095042.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2596123 2608494 + Gripap1 protein_coding retained_intron MGP_NODShiLtJ_T0095043.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2607925 2608474 + Gripap1 protein_coding processed_transcript MGP_NODShiLtJ_T0095044.1 MGP_NODShiLtJ_G0035320.1 mouse_genomes_project X 2617677 2619322 + Gripap1 protein_coding retained_intron MGP_NODShiLtJ_T0016175.1 MGP_NODShiLtJ_G0014283.1 mouse_genomes_project X 41516457 41516740 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098215.1 MGP_NODShiLtJ_G0036627.1 mouse_genomes_project X 102611744 102611880 - Gm24718 scaRNA scaRNA MGP_NODShiLtJ_T0016670.1 MGP_NODShiLtJ_G0014778.1 mouse_genomes_project X 158107350 158107506 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011081.1 MGP_NODShiLtJ_G0009214.1 mouse_genomes_project X 102713073 102713183 + Mir223 miRNA miRNA MGP_NODShiLtJ_T0011040.1 MGP_NODShiLtJ_G0009173.1 mouse_genomes_project X 52368285 52368356 - Mir503 miRNA miRNA MGP_NODShiLtJ_T0009310.1 MGP_NODShiLtJ_G0007466.1 mouse_genomes_project X 75308036 75308558 + Gm14684 lincRNA lincRNA MGP_NODShiLtJ_T0095529.1 MGP_NODShiLtJ_G0035477.1 mouse_genomes_project X 46988513 47034805 - MGP_NODShiLtJ_P0095529 Zdhhc9 protein_coding protein_coding MGP_NODShiLtJ_T0095530.1 MGP_NODShiLtJ_G0035477.1 mouse_genomes_project X 46988513 47034614 - MGP_NODShiLtJ_P0095530 Zdhhc9 protein_coding protein_coding MGP_NODShiLtJ_T0095531.1 MGP_NODShiLtJ_G0035477.1 mouse_genomes_project X 47005007 47034592 - Zdhhc9 protein_coding retained_intron MGP_NODShiLtJ_T0095532.1 MGP_NODShiLtJ_G0035477.1 mouse_genomes_project X 47015965 47034529 - Zdhhc9 protein_coding retained_intron MGP_NODShiLtJ_T0095533.1 MGP_NODShiLtJ_G0035477.1 mouse_genomes_project X 47027651 47034255 - Zdhhc9 protein_coding processed_transcript MGP_NODShiLtJ_T0095534.1 MGP_NODShiLtJ_G0035477.1 mouse_genomes_project X 47032594 47034585 - Zdhhc9 protein_coding processed_transcript MGP_NODShiLtJ_T0099663.1 MGP_NODShiLtJ_G0038057.1 mouse_genomes_project X 33268325 33268423 - Gm22364 snRNA snRNA MGP_NODShiLtJ_T0097067.1 MGP_NODShiLtJ_G0035924.1 mouse_genomes_project X 154958430 155234397 + MGP_NODShiLtJ_P0097067 Col4a5 protein_coding protein_coding MGP_NODShiLtJ_T0097068.1 MGP_NODShiLtJ_G0035924.1 mouse_genomes_project X 154958455 155234343 + MGP_NODShiLtJ_P0097068 Col4a5 protein_coding protein_coding MGP_NODShiLtJ_T0097069.1 MGP_NODShiLtJ_G0035924.1 mouse_genomes_project X 154958780 155220471 + MGP_NODShiLtJ_P0097069 Col4a5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097070.1 MGP_NODShiLtJ_G0035924.1 mouse_genomes_project X 155171080 155207421 + Col4a5 protein_coding processed_transcript MGP_NODShiLtJ_T0011113.1 MGP_NODShiLtJ_G0009246.1 mouse_genomes_project X 165044062 165044123 - Mir3620 miRNA miRNA MGP_NODShiLtJ_T0097558.1 MGP_NODShiLtJ_G0036042.1 mouse_genomes_project X 183084757 183096508 - MGP_NODShiLtJ_P0097558 Tceanc protein_coding protein_coding MGP_NODShiLtJ_T0097559.1 MGP_NODShiLtJ_G0036042.1 mouse_genomes_project X 183087271 183088351 - MGP_NODShiLtJ_P0097559 Tceanc protein_coding protein_coding MGP_NODShiLtJ_T0097560.1 MGP_NODShiLtJ_G0036042.1 mouse_genomes_project X 183088245 183105823 - MGP_NODShiLtJ_P0097560 Tceanc protein_coding protein_coding MGP_NODShiLtJ_T0016167.1 MGP_NODShiLtJ_G0014275.1 mouse_genomes_project X 39291588 39292895 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016728.1 MGP_NODShiLtJ_G0014836.1 mouse_genomes_project X 173042431 173043342 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016358.1 MGP_NODShiLtJ_G0014466.1 mouse_genomes_project X 90448871 90449385 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016603.1 MGP_NODShiLtJ_G0014711.1 mouse_genomes_project X 147042925 147043291 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016727.1 MGP_NODShiLtJ_G0014835.1 mouse_genomes_project X 172972968 172974014 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097374.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175061518 175252482 + MGP_NODShiLtJ_P0097374 Rps6ka3 protein_coding protein_coding MGP_NODShiLtJ_T0097375.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175118142 175180252 + MGP_NODShiLtJ_P0097375 Rps6ka3 protein_coding protein_coding MGP_NODShiLtJ_T0097376.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175118157 175256224 + MGP_NODShiLtJ_P0097376 Rps6ka3 protein_coding protein_coding MGP_NODShiLtJ_T0097377.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175118224 175195882 + MGP_NODShiLtJ_P0097377 Rps6ka3 protein_coding protein_coding MGP_NODShiLtJ_T0097378.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175118425 175195972 + MGP_NODShiLtJ_P0097378 Rps6ka3 protein_coding protein_coding MGP_NODShiLtJ_T0097379.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175140266 175194393 + MGP_NODShiLtJ_P0097379 Rps6ka3 protein_coding protein_coding MGP_NODShiLtJ_T0097380.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175171395 175198385 + MGP_NODShiLtJ_P0097380 Rps6ka3 protein_coding protein_coding MGP_NODShiLtJ_T0097381.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175250300 175251485 + Rps6ka3 protein_coding processed_transcript MGP_NODShiLtJ_T0097382.1 MGP_NODShiLtJ_G0035996.1 mouse_genomes_project X 175250385 175251720 + Rps6ka3 protein_coding retained_intron MGP_NODShiLtJ_T0016290.1 MGP_NODShiLtJ_G0014398.1 mouse_genomes_project X 72855007 72855612 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095802.1 MGP_NODShiLtJ_G0035571.1 mouse_genomes_project X 73713777 73717765 + MGP_NODShiLtJ_P0095802 Hmgb3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095803.1 MGP_NODShiLtJ_G0035571.1 mouse_genomes_project X 73714737 73717065 + MGP_NODShiLtJ_P0095803 Hmgb3 protein_coding protein_coding MGP_NODShiLtJ_T0095804.1 MGP_NODShiLtJ_G0035571.1 mouse_genomes_project X 73715574 73717064 + Hmgb3 protein_coding retained_intron MGP_NODShiLtJ_T0011087.1 MGP_NODShiLtJ_G0009220.1 mouse_genomes_project X 111047339 111047434 - Mir374b miRNA miRNA MGP_NODShiLtJ_T0102283.1 MGP_NODShiLtJ_G0040449.1 mouse_genomes_project X 169222354 169222837 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0097080.1 MGP_NODShiLtJ_G0035930.1 mouse_genomes_project X 155941966 155943509 - MGP_NODShiLtJ_P0097080 Kcne1l protein_coding protein_coding MGP_NODShiLtJ_T0096018.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76724888 76754179 - MGP_NODShiLtJ_P0096018 Flna protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096019.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76724888 76759427 - MGP_NODShiLtJ_P0096019 Flna protein_coding protein_coding MGP_NODShiLtJ_T0096020.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76724890 76754315 - MGP_NODShiLtJ_P0096020 Flna protein_coding protein_coding MGP_NODShiLtJ_T0096021.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76724968 76754336 - MGP_NODShiLtJ_P0096021 Flna protein_coding protein_coding MGP_NODShiLtJ_T0096022.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76725216 76754145 - MGP_NODShiLtJ_P0096022 Flna protein_coding protein_coding MGP_NODShiLtJ_T0096023.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76726237 76727907 - Flna protein_coding processed_transcript MGP_NODShiLtJ_T0096024.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76726261 76728217 - Flna protein_coding retained_intron MGP_NODShiLtJ_T0096025.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76727875 76729048 - Flna protein_coding retained_intron MGP_NODShiLtJ_T0096026.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76728299 76729917 - MGP_NODShiLtJ_P0096026 Flna protein_coding protein_coding MGP_NODShiLtJ_T0096027.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76728664 76729396 - Flna protein_coding retained_intron MGP_NODShiLtJ_T0096028.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76729279 76730491 - MGP_NODShiLtJ_P0096028 Flna protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096029.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76729513 76730227 - Flna protein_coding retained_intron MGP_NODShiLtJ_T0096030.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76729807 76731998 - MGP_NODShiLtJ_P0096030 Flna protein_coding protein_coding MGP_NODShiLtJ_T0096031.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76732123 76737391 - Flna protein_coding processed_transcript MGP_NODShiLtJ_T0096032.1 MGP_NODShiLtJ_G0035619.1 mouse_genomes_project X 76737509 76745697 - Flna protein_coding processed_transcript MGP_NODShiLtJ_T0016555.1 MGP_NODShiLtJ_G0014663.1 mouse_genomes_project X 127786089 127786293 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101225.1 MGP_NODShiLtJ_G0039521.1 mouse_genomes_project X 53512147 53512383 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0099702.1 MGP_NODShiLtJ_G0038096.1 mouse_genomes_project X 125915595 125915759 + Gm24624 snRNA snRNA MGP_NODShiLtJ_T0096460.1 MGP_NODShiLtJ_G0035729.1 mouse_genomes_project X 107848520 108116696 - MGP_NODShiLtJ_P0096460 protein_coding protein_coding MGP_NODShiLtJ_T0096461.1 MGP_NODShiLtJ_G0035729.1 mouse_genomes_project X 107848520 108116668 - MGP_NODShiLtJ_P0096461 protein_coding protein_coding MGP_NODShiLtJ_T0096462.1 MGP_NODShiLtJ_G0035729.1 mouse_genomes_project X 107906655 108116696 - MGP_NODShiLtJ_P0096462 protein_coding protein_coding MGP_NODShiLtJ_T0097239.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166483458 166485628 + Huwe1 protein_coding processed_transcript MGP_NODShiLtJ_T0097240.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166484248 166487876 + Huwe1 protein_coding processed_transcript MGP_NODShiLtJ_T0097241.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166484679 166490225 + Huwe1 protein_coding processed_transcript MGP_NODShiLtJ_T0097243.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166486625 166490225 + Huwe1 protein_coding processed_transcript MGP_NODShiLtJ_T0097244.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166486691 166546985 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097245.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166486691 166641894 + MGP_NODShiLtJ_P0097245 Huwe1 protein_coding protein_coding MGP_NODShiLtJ_T0097246.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166486711 166561137 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097247.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166486711 166576048 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097249.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166487026 166541372 + Huwe1 protein_coding processed_transcript MGP_NODShiLtJ_T0097250.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166487026 166575395 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097251.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166519224 166641896 + MGP_NODShiLtJ_P0097251 Huwe1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097252.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166533846 166641894 + MGP_NODShiLtJ_P0097252 Huwe1 protein_coding protein_coding MGP_NODShiLtJ_T0097253.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166560757 166596188 + MGP_NODShiLtJ_P0097253 Huwe1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097254.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166567792 166577193 + MGP_NODShiLtJ_P0097254 Huwe1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097255.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166586226 166586941 + Huwe1 protein_coding processed_transcript MGP_NODShiLtJ_T0097256.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166611459 166616383 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097257.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166615310 166616855 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097258.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166615310 166616658 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097259.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166627739 166629070 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097260.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166627800 166630191 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0097261.1 MGP_NODShiLtJ_G0035959.1 mouse_genomes_project X 166630715 166634221 + Huwe1 protein_coding retained_intron MGP_NODShiLtJ_T0096353.1 MGP_NODShiLtJ_G0035700.1 mouse_genomes_project X 102035397 102061269 - MGP_NODShiLtJ_P0096353 Zc4h2 protein_coding protein_coding MGP_NODShiLtJ_T0096354.1 MGP_NODShiLtJ_G0035700.1 mouse_genomes_project X 102035400 102061244 - MGP_NODShiLtJ_P0096354 Zc4h2 protein_coding protein_coding MGP_NODShiLtJ_T0096355.1 MGP_NODShiLtJ_G0035700.1 mouse_genomes_project X 102035403 102061370 - MGP_NODShiLtJ_P0096355 Zc4h2 protein_coding protein_coding MGP_NODShiLtJ_T0095407.1 MGP_NODShiLtJ_G0035442.1 mouse_genomes_project X 34729253 34733144 - MGP_NODShiLtJ_P0095407 Rhox8 protein_coding protein_coding MGP_NODShiLtJ_T0016458.1 MGP_NODShiLtJ_G0014566.1 mouse_genomes_project X 110715492 110717296 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016665.1 MGP_NODShiLtJ_G0014773.1 mouse_genomes_project X 156472870 156473333 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016285.1 MGP_NODShiLtJ_G0014393.1 mouse_genomes_project X 72474099 72475511 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096788.1 MGP_NODShiLtJ_G0035837.1 mouse_genomes_project X 146515452 146546391 + MGP_NODShiLtJ_P0096788 Cstf2 protein_coding protein_coding MGP_NODShiLtJ_T0096789.1 MGP_NODShiLtJ_G0035837.1 mouse_genomes_project X 146515462 146547164 + MGP_NODShiLtJ_P0096789 Cstf2 protein_coding protein_coding MGP_NODShiLtJ_T0096790.1 MGP_NODShiLtJ_G0035837.1 mouse_genomes_project X 146515480 146531989 + MGP_NODShiLtJ_P0096790 Cstf2 protein_coding protein_coding MGP_NODShiLtJ_T0096791.1 MGP_NODShiLtJ_G0035837.1 mouse_genomes_project X 146515576 146517762 + Cstf2 protein_coding processed_transcript MGP_NODShiLtJ_T0096792.1 MGP_NODShiLtJ_G0035837.1 mouse_genomes_project X 146515599 146547164 + Cstf2 protein_coding retained_intron MGP_NODShiLtJ_T0096793.1 MGP_NODShiLtJ_G0035837.1 mouse_genomes_project X 146515599 146518899 + MGP_NODShiLtJ_P0096793 Cstf2 protein_coding protein_coding MGP_NODShiLtJ_T0096794.1 MGP_NODShiLtJ_G0035837.1 mouse_genomes_project X 146518662 146530399 + MGP_NODShiLtJ_P0096794 Cstf2 protein_coding protein_coding MGP_NODShiLtJ_T0096795.1 MGP_NODShiLtJ_G0035837.1 mouse_genomes_project X 146522526 146530436 + MGP_NODShiLtJ_P0096795 Cstf2 protein_coding protein_coding MGP_NODShiLtJ_T0096289.1 MGP_NODShiLtJ_G0035685.1 mouse_genomes_project X 99344704 99725514 - MGP_NODShiLtJ_P0096289 Pola1 protein_coding protein_coding MGP_NODShiLtJ_T0096290.1 MGP_NODShiLtJ_G0035685.1 mouse_genomes_project X 99556184 99567536 - Pola1 protein_coding processed_transcript MGP_NODShiLtJ_T0096291.1 MGP_NODShiLtJ_G0035685.1 mouse_genomes_project X 99715527 99725502 - Pola1 protein_coding retained_intron MGP_NODShiLtJ_T0096292.1 MGP_NODShiLtJ_G0035685.1 mouse_genomes_project X 99715696 99725474 - Pola1 protein_coding processed_transcript MGP_NODShiLtJ_T0016786.1 MGP_NODShiLtJ_G0014894.1 mouse_genomes_project X 185555851 185556251 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095622.1 MGP_NODShiLtJ_G0035508.1 mouse_genomes_project X 52300126 52334123 + MGP_NODShiLtJ_P0095622 Hprt protein_coding protein_coding MGP_NODShiLtJ_T0094996.1 MGP_NODShiLtJ_G0035313.1 mouse_genomes_project X 2438526 2440361 - MGP_NODShiLtJ_P0094996 Gm6169 protein_coding protein_coding MGP_NODShiLtJ_T0095056.1 MGP_NODShiLtJ_G0035323.1 mouse_genomes_project X 2679116 2681175 + Pim2 protein_coding retained_intron MGP_NODShiLtJ_T0095057.1 MGP_NODShiLtJ_G0035323.1 mouse_genomes_project X 2679156 2684285 + MGP_NODShiLtJ_P0095057 Pim2 protein_coding protein_coding MGP_NODShiLtJ_T0095058.1 MGP_NODShiLtJ_G0035323.1 mouse_genomes_project X 2679160 2684281 + MGP_NODShiLtJ_P0095058 Pim2 protein_coding protein_coding MGP_NODShiLtJ_T0095059.1 MGP_NODShiLtJ_G0035323.1 mouse_genomes_project X 2679472 2682255 + Pim2 protein_coding processed_transcript MGP_NODShiLtJ_T0011074.1 MGP_NODShiLtJ_G0009207.1 mouse_genomes_project X 76513429 76513517 - Mir718 miRNA miRNA MGP_NODShiLtJ_T0096758.1 MGP_NODShiLtJ_G0035824.1 mouse_genomes_project X 130596445 130596793 - MGP_NODShiLtJ_P0096758 Gm14920 protein_coding protein_coding MGP_NODShiLtJ_T0011109.1 MGP_NODShiLtJ_G0009242.1 mouse_genomes_project X 161368446 161368533 + Mir1912 miRNA miRNA MGP_NODShiLtJ_T0016326.1 MGP_NODShiLtJ_G0014434.1 mouse_genomes_project X 81356140 81356453 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011654.1 MGP_NODShiLtJ_G0009787.1 mouse_genomes_project X 110921824 110921950 - Gm27927 misc_RNA misc_RNA MGP_NODShiLtJ_T0095151.1 MGP_NODShiLtJ_G0035352.1 mouse_genomes_project X 4206150 4271669 + MGP_NODShiLtJ_P0095151 Lancl3 protein_coding protein_coding MGP_NODShiLtJ_T0016688.1 MGP_NODShiLtJ_G0014796.1 mouse_genomes_project X 160931350 160932319 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011675.1 MGP_NODShiLtJ_G0009808.1 mouse_genomes_project X 178874508 178874823 + Gm25557 misc_RNA misc_RNA MGP_NODShiLtJ_T0016463.1 MGP_NODShiLtJ_G0014571.1 mouse_genomes_project X 110944322 110944723 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096002.1 MGP_NODShiLtJ_G0035615.1 mouse_genomes_project X 76516172 76576776 - MGP_NODShiLtJ_P0096002 Mecp2 protein_coding protein_coding MGP_NODShiLtJ_T0096003.1 MGP_NODShiLtJ_G0035615.1 mouse_genomes_project X 76516408 76571140 - MGP_NODShiLtJ_P0096003 Mecp2 protein_coding protein_coding MGP_NODShiLtJ_T0096004.1 MGP_NODShiLtJ_G0035615.1 mouse_genomes_project X 76524842 76576797 - MGP_NODShiLtJ_P0096004 Mecp2 protein_coding protein_coding MGP_NODShiLtJ_T0096005.1 MGP_NODShiLtJ_G0035615.1 mouse_genomes_project X 76524843 76576719 - MGP_NODShiLtJ_P0096005 Mecp2 protein_coding protein_coding MGP_NODShiLtJ_T0096006.1 MGP_NODShiLtJ_G0035615.1 mouse_genomes_project X 76525224 76576717 - MGP_NODShiLtJ_P0096006 Mecp2 protein_coding protein_coding MGP_NODShiLtJ_T0096007.1 MGP_NODShiLtJ_G0035615.1 mouse_genomes_project X 76572139 76576704 - Mecp2 protein_coding retained_intron MGP_NODShiLtJ_T0016287.1 MGP_NODShiLtJ_G0014395.1 mouse_genomes_project X 72678126 72678671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097582.1 MGP_NODShiLtJ_G0036049.1 mouse_genomes_project X 185413057 185436011 - MGP_NODShiLtJ_P0097582 Msl3 protein_coding protein_coding MGP_NODShiLtJ_T0097583.1 MGP_NODShiLtJ_G0036049.1 mouse_genomes_project X 185415919 185420810 - Msl3 protein_coding retained_intron MGP_NODShiLtJ_T0097584.1 MGP_NODShiLtJ_G0036049.1 mouse_genomes_project X 185420481 185434701 - Msl3 protein_coding retained_intron MGP_NODShiLtJ_T0095396.1 MGP_NODShiLtJ_G0035433.1 mouse_genomes_project X 34077871 34081436 - MGP_NODShiLtJ_P0095396 Ndufa1 protein_coding protein_coding MGP_NODShiLtJ_T0095092.1 MGP_NODShiLtJ_G0035334.1 mouse_genomes_project X 2895615 2909205 - MGP_NODShiLtJ_P0095092 Suv39h1 protein_coding protein_coding MGP_NODShiLtJ_T0095093.1 MGP_NODShiLtJ_G0035334.1 mouse_genomes_project X 2895870 2909066 - Suv39h1 protein_coding retained_intron MGP_NODShiLtJ_T0095094.1 MGP_NODShiLtJ_G0035334.1 mouse_genomes_project X 2895879 2908703 - MGP_NODShiLtJ_P0095094 Suv39h1 protein_coding protein_coding MGP_NODShiLtJ_T0095095.1 MGP_NODShiLtJ_G0035334.1 mouse_genomes_project X 2901853 2909174 - MGP_NODShiLtJ_P0095095 Suv39h1 protein_coding protein_coding MGP_NODShiLtJ_T0095096.1 MGP_NODShiLtJ_G0035334.1 mouse_genomes_project X 2904873 2908758 - Suv39h1 protein_coding retained_intron MGP_NODShiLtJ_T0016645.1 MGP_NODShiLtJ_G0014753.1 mouse_genomes_project X 154813515 154814297 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016352.1 MGP_NODShiLtJ_G0014460.1 mouse_genomes_project X 89756662 89756988 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099676.1 MGP_NODShiLtJ_G0038070.1 mouse_genomes_project X 60369816 60369923 + Gm22287 snRNA snRNA MGP_NODShiLtJ_T0097184.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165147142 165160895 - MGP_NODShiLtJ_P0097184 Tro protein_coding protein_coding MGP_NODShiLtJ_T0097185.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165147142 165160748 - MGP_NODShiLtJ_P0097185 Tro protein_coding protein_coding MGP_NODShiLtJ_T0097186.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165147146 165160711 - MGP_NODShiLtJ_P0097186 Tro protein_coding protein_coding MGP_NODShiLtJ_T0097187.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165147146 165160711 - MGP_NODShiLtJ_P0097187 Tro protein_coding protein_coding MGP_NODShiLtJ_T0097188.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165147146 165160748 - MGP_NODShiLtJ_P0097188 Tro protein_coding protein_coding MGP_NODShiLtJ_T0097189.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165147264 165158121 - MGP_NODShiLtJ_P0097189 Tro protein_coding protein_coding MGP_NODShiLtJ_T0097190.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165151525 165153885 - Tro protein_coding retained_intron MGP_NODShiLtJ_T0097191.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165151678 165160711 - MGP_NODShiLtJ_P0097191 Tro protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097192.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165151802 165153934 - Tro protein_coding retained_intron MGP_NODShiLtJ_T0097193.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165153518 165155061 - Tro protein_coding retained_intron MGP_NODShiLtJ_T0097194.1 MGP_NODShiLtJ_G0035951.1 mouse_genomes_project X 165155599 165160684 - MGP_NODShiLtJ_P0097194 Tro protein_coding protein_coding MGP_NODShiLtJ_T0096277.1 MGP_NODShiLtJ_G0035676.1 mouse_genomes_project X 94755842 94762773 - MGP_NODShiLtJ_P0096277 Pet2 protein_coding protein_coding MGP_NODShiLtJ_T0096278.1 MGP_NODShiLtJ_G0035676.1 mouse_genomes_project X 94755842 94762773 - MGP_NODShiLtJ_P0096278 Pet2 protein_coding protein_coding MGP_NODShiLtJ_T0016193.1 MGP_NODShiLtJ_G0014301.1 mouse_genomes_project X 48087923 48088272 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016684.1 MGP_NODShiLtJ_G0014792.1 mouse_genomes_project X 160196829 160197913 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016764.1 MGP_NODShiLtJ_G0014872.1 mouse_genomes_project X 179457552 179458039 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095694.1 MGP_NODShiLtJ_G0035535.1 mouse_genomes_project X 57235311 57244778 - MGP_NODShiLtJ_P0095694 Rbmx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095695.1 MGP_NODShiLtJ_G0035535.1 mouse_genomes_project X 57237810 57244833 - MGP_NODShiLtJ_P0095695 Rbmx protein_coding protein_coding MGP_NODShiLtJ_T0095696.1 MGP_NODShiLtJ_G0035535.1 mouse_genomes_project X 57238863 57244776 - MGP_NODShiLtJ_P0095696 Rbmx protein_coding protein_coding MGP_NODShiLtJ_T0095697.1 MGP_NODShiLtJ_G0035535.1 mouse_genomes_project X 57241928 57244594 - MGP_NODShiLtJ_P0095697 Rbmx protein_coding protein_coding MGP_NODShiLtJ_T0016284.1 MGP_NODShiLtJ_G0014392.1 mouse_genomes_project X 72461703 72462627 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096281.1 MGP_NODShiLtJ_G0035679.1 mouse_genomes_project X 96495882 96496875 + MGP_NODShiLtJ_P0096281 Gm44 protein_coding protein_coding MGP_NODShiLtJ_T0099651.1 MGP_NODShiLtJ_G0038045.1 mouse_genomes_project X 7090181 7090288 + Gm26314 snRNA snRNA MGP_NODShiLtJ_T0016177.1 MGP_NODShiLtJ_G0014285.1 mouse_genomes_project X 41780233 41780868 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016534.1 MGP_NODShiLtJ_G0014642.1 mouse_genomes_project X 123693817 123695178 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100989.1 MGP_NODShiLtJ_G0039383.1 mouse_genomes_project X 183990875 183990993 - Gm26368 snoRNA snoRNA MGP_NODShiLtJ_T0097081.1 MGP_NODShiLtJ_G0035931.1 mouse_genomes_project X 155955177 156046660 - MGP_NODShiLtJ_P0097081 Acsl4 protein_coding protein_coding MGP_NODShiLtJ_T0097082.1 MGP_NODShiLtJ_G0035931.1 mouse_genomes_project X 155958818 155966948 - Acsl4 protein_coding processed_transcript MGP_NODShiLtJ_T0097083.1 MGP_NODShiLtJ_G0035931.1 mouse_genomes_project X 155958824 156046660 - MGP_NODShiLtJ_P0097083 Acsl4 protein_coding protein_coding MGP_NODShiLtJ_T0016392.1 MGP_NODShiLtJ_G0014500.1 mouse_genomes_project X 99732733 99733004 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100974.1 MGP_NODShiLtJ_G0039368.1 mouse_genomes_project X 150083785 150083904 + Gm23679 snoRNA snoRNA MGP_NODShiLtJ_T0095264.1 MGP_NODShiLtJ_G0035389.1 mouse_genomes_project X 16692726 16796108 + MGP_NODShiLtJ_P0095264 Jade3 protein_coding protein_coding MGP_NODShiLtJ_T0095265.1 MGP_NODShiLtJ_G0035389.1 mouse_genomes_project X 16692809 16796114 + MGP_NODShiLtJ_P0095265 Jade3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095266.1 MGP_NODShiLtJ_G0035389.1 mouse_genomes_project X 16692826 16770152 + Jade3 protein_coding retained_intron MGP_NODShiLtJ_T0095267.1 MGP_NODShiLtJ_G0035389.1 mouse_genomes_project X 16734586 16794065 + MGP_NODShiLtJ_P0095267 Jade3 protein_coding protein_coding MGP_NODShiLtJ_T0016696.1 MGP_NODShiLtJ_G0014804.1 mouse_genomes_project X 165568936 165569595 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095143.1 MGP_NODShiLtJ_G0035344.1 mouse_genomes_project X 3730630 3749535 + MGP_NODShiLtJ_P0095143 protein_coding protein_coding MGP_NODShiLtJ_T0095635.1 MGP_NODShiLtJ_G0035513.1 mouse_genomes_project X 52772777 52781816 + MGP_NODShiLtJ_P0095635 Etd protein_coding protein_coding MGP_NODShiLtJ_T0100934.1 MGP_NODShiLtJ_G0039328.1 mouse_genomes_project X 2312911 2313044 - Gm23082 snoRNA snoRNA MGP_NODShiLtJ_T0095974.1 MGP_NODShiLtJ_G0035613.1 mouse_genomes_project X 76419856 76443409 - MGP_NODShiLtJ_P0095974 Hcfc1 protein_coding protein_coding MGP_NODShiLtJ_T0095975.1 MGP_NODShiLtJ_G0035613.1 mouse_genomes_project X 76419859 76426315 - MGP_NODShiLtJ_P0095975 Hcfc1 protein_coding protein_coding MGP_NODShiLtJ_T0095976.1 MGP_NODShiLtJ_G0035613.1 mouse_genomes_project X 76419861 76443403 - MGP_NODShiLtJ_P0095976 Hcfc1 protein_coding protein_coding MGP_NODShiLtJ_T0095977.1 MGP_NODShiLtJ_G0035613.1 mouse_genomes_project X 76422385 76424497 - Hcfc1 protein_coding retained_intron MGP_NODShiLtJ_T0095978.1 MGP_NODShiLtJ_G0035613.1 mouse_genomes_project X 76424259 76425411 - Hcfc1 protein_coding processed_transcript MGP_NODShiLtJ_T0095979.1 MGP_NODShiLtJ_G0035613.1 mouse_genomes_project X 76432180 76434489 - Hcfc1 protein_coding processed_transcript MGP_NODShiLtJ_T0016592.1 MGP_NODShiLtJ_G0014700.1 mouse_genomes_project X 142988275 142989585 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095504.1 MGP_NODShiLtJ_G0035469.1 mouse_genomes_project X 42997664 43001292 - MGP_NODShiLtJ_P0095504 Dcaf12l1 protein_coding protein_coding MGP_NODShiLtJ_T0095505.1 MGP_NODShiLtJ_G0035469.1 mouse_genomes_project X 42997664 43001256 - MGP_NODShiLtJ_P0095505 Dcaf12l1 protein_coding protein_coding MGP_NODShiLtJ_T0099692.1 MGP_NODShiLtJ_G0038086.1 mouse_genomes_project X 112668383 112668494 - Gm22090 snRNA snRNA MGP_NODShiLtJ_T0099716.1 MGP_NODShiLtJ_G0038110.1 mouse_genomes_project X 168894613 168894713 - Gm25895 snRNA snRNA MGP_NODShiLtJ_T0016203.1 MGP_NODShiLtJ_G0014311.1 mouse_genomes_project X 50380278 50380967 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096663.1 MGP_NODShiLtJ_G0035784.1 mouse_genomes_project X 114117683 114258279 - Fndc3c1 protein_coding retained_intron MGP_NODShiLtJ_T0096664.1 MGP_NODShiLtJ_G0035784.1 mouse_genomes_project X 114233081 114318505 - MGP_NODShiLtJ_P0096664 Fndc3c1 protein_coding protein_coding MGP_NODShiLtJ_T0096665.1 MGP_NODShiLtJ_G0035784.1 mouse_genomes_project X 114245606 114252622 - Fndc3c1 protein_coding retained_intron MGP_NODShiLtJ_T0096666.1 MGP_NODShiLtJ_G0035784.1 mouse_genomes_project X 114245613 114254129 - Fndc3c1 protein_coding processed_transcript MGP_NODShiLtJ_T0096667.1 MGP_NODShiLtJ_G0035784.1 mouse_genomes_project X 114273341 114318253 - MGP_NODShiLtJ_P0096667 Fndc3c1 protein_coding protein_coding MGP_NODShiLtJ_T0096668.1 MGP_NODShiLtJ_G0035784.1 mouse_genomes_project X 114298521 114318128 - MGP_NODShiLtJ_P0096668 Fndc3c1 protein_coding protein_coding MGP_NODShiLtJ_T0096669.1 MGP_NODShiLtJ_G0035784.1 mouse_genomes_project X 114298533 114318632 - MGP_NODShiLtJ_P0096669 Fndc3c1 protein_coding protein_coding MGP_NODShiLtJ_T0011016.1 MGP_NODShiLtJ_G0009149.1 mouse_genomes_project X 17131271 17131349 - Gm24824 miRNA miRNA MGP_NODShiLtJ_T0096697.1 MGP_NODShiLtJ_G0035796.1 mouse_genomes_project X 116922344 116923232 - MGP_NODShiLtJ_P0096697 Gm379 protein_coding protein_coding MGP_NODShiLtJ_T0016695.1 MGP_NODShiLtJ_G0014803.1 mouse_genomes_project X 165476598 165478138 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016309.1 MGP_NODShiLtJ_G0014417.1 mouse_genomes_project X 77956827 77958756 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096658.1 MGP_NODShiLtJ_G0035782.1 mouse_genomes_project X 113927358 113948201 + MGP_NODShiLtJ_P0096658 protein_coding protein_coding MGP_NODShiLtJ_T0096659.1 MGP_NODShiLtJ_G0035782.1 mouse_genomes_project X 113927453 113948068 + MGP_NODShiLtJ_P0096659 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096558.1 MGP_NODShiLtJ_G0035750.1 mouse_genomes_project X 109368829 109375490 - MGP_NODShiLtJ_P0096558 Rps4x protein_coding protein_coding MGP_NODShiLtJ_T0096559.1 MGP_NODShiLtJ_G0035750.1 mouse_genomes_project X 109369844 109371519 - Rps4x protein_coding retained_intron MGP_NODShiLtJ_T0096560.1 MGP_NODShiLtJ_G0035750.1 mouse_genomes_project X 109372950 109375432 - Rps4x protein_coding retained_intron MGP_NODShiLtJ_T0101219.1 MGP_NODShiLtJ_G0039517.1 mouse_genomes_project X 17759652 17763418 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101220.1 MGP_NODShiLtJ_G0039517.1 mouse_genomes_project X 17759727 17761810 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0016740.1 MGP_NODShiLtJ_G0014848.1 mouse_genomes_project X 174302725 174303304 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099654.1 MGP_NODShiLtJ_G0038048.1 mouse_genomes_project X 11383129 11383236 - Gm25207 snRNA snRNA MGP_NODShiLtJ_T0016432.1 MGP_NODShiLtJ_G0014540.1 mouse_genomes_project X 107288240 107289378 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016651.1 MGP_NODShiLtJ_G0014759.1 mouse_genomes_project X 155439842 155440115 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016702.1 MGP_NODShiLtJ_G0014810.1 mouse_genomes_project X 166440917 166441633 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097565.1 MGP_NODShiLtJ_G0036045.1 mouse_genomes_project X 183862889 183884557 - MGP_NODShiLtJ_P0097565 Tlr8 protein_coding protein_coding MGP_NODShiLtJ_T0097566.1 MGP_NODShiLtJ_G0036045.1 mouse_genomes_project X 183862925 183884059 - MGP_NODShiLtJ_P0097566 Tlr8 protein_coding protein_coding MGP_NODShiLtJ_T0097567.1 MGP_NODShiLtJ_G0036045.1 mouse_genomes_project X 183865012 183884570 - Tlr8 protein_coding processed_transcript MGP_NODShiLtJ_T0097568.1 MGP_NODShiLtJ_G0036045.1 mouse_genomes_project X 183865736 183884600 - MGP_NODShiLtJ_P0097568 Tlr8 protein_coding protein_coding MGP_NODShiLtJ_T0097569.1 MGP_NODShiLtJ_G0036045.1 mouse_genomes_project X 183879623 183884555 - Tlr8 protein_coding processed_transcript MGP_NODShiLtJ_T0018510.1 MGP_NODShiLtJ_G0015658.1 mouse_genomes_project X 148915372 148926766 + 5730412P04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0009361.1 MGP_NODShiLtJ_G0007496.1 mouse_genomes_project X 183260316 183290864 + Gm1720 lincRNA lincRNA MGP_NODShiLtJ_T0016416.1 MGP_NODShiLtJ_G0014524.1 mouse_genomes_project X 102870233 102875102 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095570.1 MGP_NODShiLtJ_G0035487.1 mouse_genomes_project X 47747686 47778218 - MGP_NODShiLtJ_P0095570 Gm595 protein_coding protein_coding MGP_NODShiLtJ_T0005540.1 MGP_NODShiLtJ_G0004665.1 mouse_genomes_project X 108932859 108937204 + antisense antisense MGP_NODShiLtJ_T0005541.1 MGP_NODShiLtJ_G0004665.1 mouse_genomes_project X 108934832 108936804 + antisense antisense MGP_NODShiLtJ_T0016087.1 MGP_NODShiLtJ_G0014195.1 mouse_genomes_project X 6226036 6226529 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016678.1 MGP_NODShiLtJ_G0014786.1 mouse_genomes_project X 159674613 159675561 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011116.1 MGP_NODShiLtJ_G0009249.1 mouse_genomes_project X 166619672 166619780 + Mir98 miRNA miRNA MGP_NODShiLtJ_T0016706.1 MGP_NODShiLtJ_G0014814.1 mouse_genomes_project X 167764309 167765415 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016241.1 MGP_NODShiLtJ_G0014349.1 mouse_genomes_project X 61160681 61161406 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009283.1 MGP_NODShiLtJ_G0007448.1 mouse_genomes_project X 8629550 8631193 - 2010308F09Rik lincRNA lincRNA MGP_NODShiLtJ_T0009284.1 MGP_NODShiLtJ_G0007448.1 mouse_genomes_project X 8629593 8644237 - 2010308F09Rik lincRNA lincRNA MGP_NODShiLtJ_T0097212.1 MGP_NODShiLtJ_G0035954.1 mouse_genomes_project X 165622741 165668020 + MGP_NODShiLtJ_P0097212 Fgd1 protein_coding protein_coding MGP_NODShiLtJ_T0097213.1 MGP_NODShiLtJ_G0035954.1 mouse_genomes_project X 165623761 165668020 + MGP_NODShiLtJ_P0097213 Fgd1 protein_coding protein_coding MGP_NODShiLtJ_T0097214.1 MGP_NODShiLtJ_G0035954.1 mouse_genomes_project X 165644659 165646945 + Fgd1 protein_coding retained_intron MGP_NODShiLtJ_T0097215.1 MGP_NODShiLtJ_G0035954.1 mouse_genomes_project X 165664608 165665680 + Fgd1 protein_coding retained_intron MGP_NODShiLtJ_T0016110.1 MGP_NODShiLtJ_G0014218.1 mouse_genomes_project X 11182406 11182743 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094939.1 MGP_NODShiLtJ_G0035295.1 mouse_genomes_project X 87662 89853 - MGP_NODShiLtJ_P0094939 Mycs protein_coding protein_coding MGP_NODShiLtJ_T0097165.1 MGP_NODShiLtJ_G0035949.1 mouse_genomes_project X 165044052 165067305 + MGP_NODShiLtJ_P0097165 Alas2 protein_coding protein_coding MGP_NODShiLtJ_T0097166.1 MGP_NODShiLtJ_G0035949.1 mouse_genomes_project X 165044136 165067289 + MGP_NODShiLtJ_P0097166 Alas2 protein_coding protein_coding MGP_NODShiLtJ_T0097167.1 MGP_NODShiLtJ_G0035949.1 mouse_genomes_project X 165050714 165054341 + Alas2 protein_coding retained_intron MGP_NODShiLtJ_T0097168.1 MGP_NODShiLtJ_G0035949.1 mouse_genomes_project X 165063056 165067289 + Alas2 protein_coding processed_transcript MGP_NODShiLtJ_T0009358.1 MGP_NODShiLtJ_G0007493.1 mouse_genomes_project X 177355175 177376255 + lincRNA lincRNA MGP_NODShiLtJ_T0016756.1 MGP_NODShiLtJ_G0014864.1 mouse_genomes_project X 178515237 178517863 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097304.1 MGP_NODShiLtJ_G0035971.1 mouse_genomes_project X 167922726 167924551 - MGP_NODShiLtJ_P0097304 Mageh1 protein_coding protein_coding MGP_NODShiLtJ_T0096739.1 MGP_NODShiLtJ_G0035814.1 mouse_genomes_project X 122273472 122941606 + MGP_NODShiLtJ_P0096739 Dach2 protein_coding protein_coding MGP_NODShiLtJ_T0096740.1 MGP_NODShiLtJ_G0035814.1 mouse_genomes_project X 122273484 122936797 + MGP_NODShiLtJ_P0096740 Dach2 protein_coding protein_coding MGP_NODShiLtJ_T0096741.1 MGP_NODShiLtJ_G0035814.1 mouse_genomes_project X 122273538 122940978 + MGP_NODShiLtJ_P0096741 Dach2 protein_coding protein_coding MGP_NODShiLtJ_T0096742.1 MGP_NODShiLtJ_G0035814.1 mouse_genomes_project X 122274219 122941339 + MGP_NODShiLtJ_P0096742 Dach2 protein_coding protein_coding MGP_NODShiLtJ_T0096743.1 MGP_NODShiLtJ_G0035814.1 mouse_genomes_project X 122274219 122939066 + MGP_NODShiLtJ_P0096743 Dach2 protein_coding protein_coding MGP_NODShiLtJ_T0096744.1 MGP_NODShiLtJ_G0035814.1 mouse_genomes_project X 122778662 122939066 + Dach2 protein_coding processed_transcript MGP_NODShiLtJ_T0096978.1 MGP_NODShiLtJ_G0035896.1 mouse_genomes_project X 150035791 150042219 - MGP_NODShiLtJ_P0096978 Esx1 protein_coding protein_coding MGP_NODShiLtJ_T0096979.1 MGP_NODShiLtJ_G0035896.1 mouse_genomes_project X 150035791 150042374 - MGP_NODShiLtJ_P0096979 Esx1 protein_coding protein_coding MGP_NODShiLtJ_T0016437.1 MGP_NODShiLtJ_G0014545.1 mouse_genomes_project X 108574500 108574712 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016768.1 MGP_NODShiLtJ_G0014876.1 mouse_genomes_project X 180092409 180092625 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095827.1 MGP_NODShiLtJ_G0035580.1 mouse_genomes_project X 74653968 74658957 - MGP_NODShiLtJ_P0095827 Magea10 protein_coding protein_coding MGP_NODShiLtJ_T0009295.1 MGP_NODShiLtJ_G0007455.1 mouse_genomes_project X 33684219 33687119 - Mdrl lincRNA lincRNA MGP_NODShiLtJ_T0098216.1 MGP_NODShiLtJ_G0036628.1 mouse_genomes_project X 124767838 124768219 + Gm27414 scaRNA scaRNA MGP_NODShiLtJ_T0095337.1 MGP_NODShiLtJ_G0035410.1 mouse_genomes_project X 19878585 19971021 - MGP_NODShiLtJ_P0095337 Klhl13 protein_coding protein_coding MGP_NODShiLtJ_T0095338.1 MGP_NODShiLtJ_G0035410.1 mouse_genomes_project X 19878593 19970929 - MGP_NODShiLtJ_P0095338 Klhl13 protein_coding protein_coding MGP_NODShiLtJ_T0095339.1 MGP_NODShiLtJ_G0035410.1 mouse_genomes_project X 19878594 19950831 - MGP_NODShiLtJ_P0095339 Klhl13 protein_coding protein_coding MGP_NODShiLtJ_T0095340.1 MGP_NODShiLtJ_G0035410.1 mouse_genomes_project X 19899672 19984901 - Klhl13 protein_coding processed_transcript MGP_NODShiLtJ_T0101221.1 MGP_NODShiLtJ_G0039518.1 mouse_genomes_project X 19009291 19010054 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101222.1 MGP_NODShiLtJ_G0039518.1 mouse_genomes_project X 19009388 19009997 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0095506.1 MGP_NODShiLtJ_G0035470.1 mouse_genomes_project X 43401791 43403679 + MGP_NODShiLtJ_P0095506 Prr32 protein_coding protein_coding MGP_NODShiLtJ_T0016681.1 MGP_NODShiLtJ_G0014789.1 mouse_genomes_project X 160067319 160067871 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098142.1 MGP_NODShiLtJ_G0036554.1 mouse_genomes_project X 184600047 184600157 + Gm24772 rRNA rRNA MGP_NODShiLtJ_T0097363.1 MGP_NODShiLtJ_G0035993.1 mouse_genomes_project X 173340667 173393538 + MGP_NODShiLtJ_P0097363 Smpx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097364.1 MGP_NODShiLtJ_G0035993.1 mouse_genomes_project X 173340667 173344770 + MGP_NODShiLtJ_P0097364 Smpx protein_coding protein_coding MGP_NODShiLtJ_T0097365.1 MGP_NODShiLtJ_G0035993.1 mouse_genomes_project X 173340730 173393536 + MGP_NODShiLtJ_P0097365 Smpx protein_coding protein_coding MGP_NODShiLtJ_T0097366.1 MGP_NODShiLtJ_G0035993.1 mouse_genomes_project X 173340884 173393536 + MGP_NODShiLtJ_P0097366 Smpx protein_coding protein_coding MGP_NODShiLtJ_T0097367.1 MGP_NODShiLtJ_G0035993.1 mouse_genomes_project X 173341017 173393161 + MGP_NODShiLtJ_P0097367 Smpx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097368.1 MGP_NODShiLtJ_G0035993.1 mouse_genomes_project X 173344355 173393188 + MGP_NODShiLtJ_P0097368 Smpx protein_coding protein_coding MGP_NODShiLtJ_T0097369.1 MGP_NODShiLtJ_G0035993.1 mouse_genomes_project X 173357216 173393158 + Smpx protein_coding retained_intron MGP_NODShiLtJ_T0097370.1 MGP_NODShiLtJ_G0035993.1 mouse_genomes_project X 173363358 173393230 + Smpx protein_coding retained_intron MGP_NODShiLtJ_T0005554.1 MGP_NODShiLtJ_G0004674.1 mouse_genomes_project X 178046849 178047404 + Gm15202 antisense antisense MGP_NODShiLtJ_T0018469.1 MGP_NODShiLtJ_G0015644.1 mouse_genomes_project X 53082372 53083723 - processed_transcript TEC MGP_NODShiLtJ_T0018470.1 MGP_NODShiLtJ_G0015644.1 mouse_genomes_project X 53083383 53092731 - processed_transcript lincRNA MGP_NODShiLtJ_T0096933.1 MGP_NODShiLtJ_G0035884.1 mouse_genomes_project X 149559756 149563248 + MGP_NODShiLtJ_P0096933 Tceal1 protein_coding protein_coding MGP_NODShiLtJ_T0016673.1 MGP_NODShiLtJ_G0014781.1 mouse_genomes_project X 158370794 158372168 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099723.1 MGP_NODShiLtJ_G0038117.1 mouse_genomes_project X 182297082 182297189 - Gm22062 snRNA snRNA MGP_NODShiLtJ_T0097487.1 MGP_NODShiLtJ_G0036022.1 mouse_genomes_project X 180317172 180374700 - MGP_NODShiLtJ_P0097487 Car5b protein_coding protein_coding MGP_NODShiLtJ_T0097488.1 MGP_NODShiLtJ_G0036022.1 mouse_genomes_project X 180355605 180374684 - Car5b protein_coding retained_intron MGP_NODShiLtJ_T0016354.1 MGP_NODShiLtJ_G0014462.1 mouse_genomes_project X 90162991 90163358 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096708.1 MGP_NODShiLtJ_G0035801.1 mouse_genomes_project X 118360541 118362355 + MGP_NODShiLtJ_P0096708 protein_coding protein_coding MGP_NODShiLtJ_T0016386.1 MGP_NODShiLtJ_G0014494.1 mouse_genomes_project X 97331475 97332622 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095320.1 MGP_NODShiLtJ_G0035402.1 mouse_genomes_project X 17355260 17391856 - MGP_NODShiLtJ_P0095320 Zfp182 protein_coding protein_coding MGP_NODShiLtJ_T0095321.1 MGP_NODShiLtJ_G0035402.1 mouse_genomes_project X 17355264 17391905 - MGP_NODShiLtJ_P0095321 Zfp182 protein_coding protein_coding MGP_NODShiLtJ_T0095322.1 MGP_NODShiLtJ_G0035402.1 mouse_genomes_project X 17355910 17391839 - MGP_NODShiLtJ_P0095322 Zfp182 protein_coding protein_coding MGP_NODShiLtJ_T0095323.1 MGP_NODShiLtJ_G0035402.1 mouse_genomes_project X 17357910 17392169 - Zfp182 protein_coding processed_transcript MGP_NODShiLtJ_T0095324.1 MGP_NODShiLtJ_G0035402.1 mouse_genomes_project X 17387471 17391896 - Zfp182 protein_coding processed_transcript MGP_NODShiLtJ_T0016102.1 MGP_NODShiLtJ_G0014210.1 mouse_genomes_project X 8707114 8710073 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011022.1 MGP_NODShiLtJ_G0009155.1 mouse_genomes_project X 37109744 37109815 - Gm26194 miRNA miRNA MGP_NODShiLtJ_T0016721.1 MGP_NODShiLtJ_G0014829.1 mouse_genomes_project X 170742964 170743852 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100969.1 MGP_NODShiLtJ_G0039363.1 mouse_genomes_project X 140552815 140552947 - Gm26029 snoRNA snoRNA MGP_NODShiLtJ_T0016526.1 MGP_NODShiLtJ_G0014634.1 mouse_genomes_project X 121866093 121866301 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097355.1 MGP_NODShiLtJ_G0035991.1 mouse_genomes_project X 173157818 173195745 - Mbtps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097356.1 MGP_NODShiLtJ_G0035991.1 mouse_genomes_project X 173170960 173232018 - MGP_NODShiLtJ_P0097356 Mbtps2 protein_coding protein_coding MGP_NODShiLtJ_T0097357.1 MGP_NODShiLtJ_G0035991.1 mouse_genomes_project X 173191836 173231953 - MGP_NODShiLtJ_P0097357 Mbtps2 protein_coding protein_coding MGP_NODShiLtJ_T0097358.1 MGP_NODShiLtJ_G0035991.1 mouse_genomes_project X 173191837 173231953 - MGP_NODShiLtJ_P0097358 Mbtps2 protein_coding protein_coding MGP_NODShiLtJ_T0097360.1 MGP_NODShiLtJ_G0035991.1 mouse_genomes_project X 173199784 173231954 - Mbtps2 protein_coding retained_intron MGP_NODShiLtJ_T0097361.1 MGP_NODShiLtJ_G0035991.1 mouse_genomes_project X 173201515 173231982 - MGP_NODShiLtJ_P0097361 Mbtps2 protein_coding protein_coding MGP_NODShiLtJ_T0097362.1 MGP_NODShiLtJ_G0035991.1 mouse_genomes_project X 173222074 173231946 - Mbtps2 protein_coding retained_intron MGP_NODShiLtJ_T0101224.1 MGP_NODShiLtJ_G0039520.1 mouse_genomes_project X 34549566 34550017 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0016468.1 MGP_NODShiLtJ_G0014576.1 mouse_genomes_project X 111124757 111125930 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005523.1 MGP_NODShiLtJ_G0004650.1 mouse_genomes_project X 57045494 57050694 + Gm14718 antisense antisense MGP_NODShiLtJ_T0016759.1 MGP_NODShiLtJ_G0014867.1 mouse_genomes_project X 178878472 178879114 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011071.1 MGP_NODShiLtJ_G0009204.1 mouse_genomes_project X 74881058 74881138 - Mir105 miRNA miRNA MGP_NODShiLtJ_T0096764.1 MGP_NODShiLtJ_G0035827.1 mouse_genomes_project X 138089493 138096766 + MGP_NODShiLtJ_P0096764 Gm382 protein_coding protein_coding MGP_NODShiLtJ_T0097051.1 MGP_NODShiLtJ_G0035918.1 mouse_genomes_project X 154157637 154178026 + MGP_NODShiLtJ_P0097051 Mid2 protein_coding protein_coding MGP_NODShiLtJ_T0097052.1 MGP_NODShiLtJ_G0035918.1 mouse_genomes_project X 154157994 154282749 + MGP_NODShiLtJ_P0097052 Mid2 protein_coding protein_coding MGP_NODShiLtJ_T0097053.1 MGP_NODShiLtJ_G0035918.1 mouse_genomes_project X 154158110 154279029 + MGP_NODShiLtJ_P0097053 Mid2 protein_coding protein_coding MGP_NODShiLtJ_T0097054.1 MGP_NODShiLtJ_G0035918.1 mouse_genomes_project X 154177345 154282749 + MGP_NODShiLtJ_P0097054 Mid2 protein_coding protein_coding MGP_NODShiLtJ_T0097055.1 MGP_NODShiLtJ_G0035918.1 mouse_genomes_project X 154262806 154265941 + Mid2 protein_coding retained_intron MGP_NODShiLtJ_T0016746.1 MGP_NODShiLtJ_G0014854.1 mouse_genomes_project X 175497928 175498491 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016320.1 MGP_NODShiLtJ_G0014428.1 mouse_genomes_project X 80173678 80174659 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096243.1 MGP_NODShiLtJ_G0035666.1 mouse_genomes_project X 84957550 84992680 - MGP_NODShiLtJ_P0096243 4930595M18Rik protein_coding protein_coding MGP_NODShiLtJ_T0096205.1 MGP_NODShiLtJ_G0035646.1 mouse_genomes_project X 78235623 78245700 + MGP_NODShiLtJ_P0096205 Vbp1 protein_coding protein_coding MGP_NODShiLtJ_T0096206.1 MGP_NODShiLtJ_G0035646.1 mouse_genomes_project X 78235623 78265502 + MGP_NODShiLtJ_P0096206 Vbp1 protein_coding protein_coding MGP_NODShiLtJ_T0096207.1 MGP_NODShiLtJ_G0035646.1 mouse_genomes_project X 78235641 78242976 + Vbp1 protein_coding retained_intron MGP_NODShiLtJ_T0095896.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76233336 76241271 - Idh3g protein_coding retained_intron MGP_NODShiLtJ_T0095897.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76233336 76241271 - MGP_NODShiLtJ_P0095897 Idh3g protein_coding protein_coding MGP_NODShiLtJ_T0095898.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76233416 76235271 - Idh3g protein_coding retained_intron MGP_NODShiLtJ_T0095899.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76234043 76235070 - Idh3g protein_coding retained_intron MGP_NODShiLtJ_T0095900.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76234409 76235186 - Idh3g protein_coding retained_intron MGP_NODShiLtJ_T0095901.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76234447 76240996 - Idh3g protein_coding processed_transcript MGP_NODShiLtJ_T0095902.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76234794 76236081 - Idh3g protein_coding retained_intron MGP_NODShiLtJ_T0095903.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76234961 76236593 - Idh3g protein_coding retained_intron MGP_NODShiLtJ_T0095904.1 MGP_NODShiLtJ_G0035605.1 mouse_genomes_project X 76235352 76236742 - Idh3g protein_coding processed_transcript MGP_NODShiLtJ_T0016570.1 MGP_NODShiLtJ_G0014678.1 mouse_genomes_project X 131869460 131870107 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016191.1 MGP_NODShiLtJ_G0014299.1 mouse_genomes_project X 47169701 47170049 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016365.1 MGP_NODShiLtJ_G0014473.1 mouse_genomes_project X 93583816 93584158 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097389.1 MGP_NODShiLtJ_G0035999.1 mouse_genomes_project X 175423666 175459435 + MGP_NODShiLtJ_P0097389 A830080D01Rik protein_coding protein_coding MGP_NODShiLtJ_T0097390.1 MGP_NODShiLtJ_G0035999.1 mouse_genomes_project X 175435833 175503998 + MGP_NODShiLtJ_P0097390 A830080D01Rik protein_coding protein_coding MGP_NODShiLtJ_T0097391.1 MGP_NODShiLtJ_G0035999.1 mouse_genomes_project X 175435843 175502267 + MGP_NODShiLtJ_P0097391 A830080D01Rik protein_coding protein_coding MGP_NODShiLtJ_T0097392.1 MGP_NODShiLtJ_G0035999.1 mouse_genomes_project X 175449668 175459485 + MGP_NODShiLtJ_P0097392 A830080D01Rik protein_coding protein_coding MGP_NODShiLtJ_T0097393.1 MGP_NODShiLtJ_G0035999.1 mouse_genomes_project X 175475321 175503119 + A830080D01Rik protein_coding processed_transcript MGP_NODShiLtJ_T0097394.1 MGP_NODShiLtJ_G0035999.1 mouse_genomes_project X 175476010 175483570 + A830080D01Rik protein_coding retained_intron MGP_NODShiLtJ_T0096470.1 MGP_NODShiLtJ_G0035731.1 mouse_genomes_project X 108158525 108292320 - MGP_NODShiLtJ_P0096470 Snx12 protein_coding protein_coding MGP_NODShiLtJ_T0096471.1 MGP_NODShiLtJ_G0035731.1 mouse_genomes_project X 108281741 108292330 - MGP_NODShiLtJ_P0096471 Snx12 protein_coding protein_coding MGP_NODShiLtJ_T0096472.1 MGP_NODShiLtJ_G0035731.1 mouse_genomes_project X 108281741 108292316 - MGP_NODShiLtJ_P0096472 Snx12 protein_coding protein_coding MGP_NODShiLtJ_T0096473.1 MGP_NODShiLtJ_G0035731.1 mouse_genomes_project X 108283253 108284306 - Snx12 protein_coding processed_transcript MGP_NODShiLtJ_T0097072.1 MGP_NODShiLtJ_G0035926.1 mouse_genomes_project X 155439175 155440210 - MGP_NODShiLtJ_P0097072 protein_coding protein_coding MGP_NODShiLtJ_T0097458.1 MGP_NODShiLtJ_G0036015.1 mouse_genomes_project X 179066947 179101615 - MGP_NODShiLtJ_P0097458 Syap1 protein_coding protein_coding MGP_NODShiLtJ_T0097459.1 MGP_NODShiLtJ_G0036015.1 mouse_genomes_project X 179067799 179074403 - Syap1 protein_coding retained_intron MGP_NODShiLtJ_T0097027.1 MGP_NODShiLtJ_G0035912.1 mouse_genomes_project X 153304385 153428115 - MGP_NODShiLtJ_P0097027 Rbm41 protein_coding protein_coding MGP_NODShiLtJ_T0097028.1 MGP_NODShiLtJ_G0035912.1 mouse_genomes_project X 153378353 153428077 - MGP_NODShiLtJ_P0097028 Rbm41 protein_coding protein_coding MGP_NODShiLtJ_T0097029.1 MGP_NODShiLtJ_G0035912.1 mouse_genomes_project X 153378385 153428062 - MGP_NODShiLtJ_P0097029 Rbm41 protein_coding protein_coding MGP_NODShiLtJ_T0097030.1 MGP_NODShiLtJ_G0035912.1 mouse_genomes_project X 153379216 153428071 - MGP_NODShiLtJ_P0097030 Rbm41 protein_coding protein_coding MGP_NODShiLtJ_T0097031.1 MGP_NODShiLtJ_G0035912.1 mouse_genomes_project X 153395704 153423604 - Rbm41 protein_coding retained_intron MGP_NODShiLtJ_T0097032.1 MGP_NODShiLtJ_G0035912.1 mouse_genomes_project X 153396515 153428056 - Rbm41 protein_coding processed_transcript MGP_NODShiLtJ_T0097033.1 MGP_NODShiLtJ_G0035912.1 mouse_genomes_project X 153421878 153428086 - Rbm41 protein_coding retained_intron MGP_NODShiLtJ_T0097075.1 MGP_NODShiLtJ_G0035928.1 mouse_genomes_project X 155690594 155813649 - MGP_NODShiLtJ_P0097075 Gucy2f protein_coding protein_coding MGP_NODShiLtJ_T0097076.1 MGP_NODShiLtJ_G0035928.1 mouse_genomes_project X 155695052 155806572 - MGP_NODShiLtJ_P0097076 Gucy2f protein_coding unknown_likely_coding MGP_NODShiLtJ_T0011111.1 MGP_NODShiLtJ_G0009244.1 mouse_genomes_project X 161481177 161481315 + Gm24627 miRNA miRNA MGP_NODShiLtJ_T0097346.1 MGP_NODShiLtJ_G0035988.1 mouse_genomes_project X 170886433 171156065 + Gm15155 protein_coding processed_transcript MGP_NODShiLtJ_T0097347.1 MGP_NODShiLtJ_G0035988.1 mouse_genomes_project X 170886467 171787359 + MGP_NODShiLtJ_P0097347 Gm15155 protein_coding protein_coding MGP_NODShiLtJ_T0099717.1 MGP_NODShiLtJ_G0038111.1 mouse_genomes_project X 169818481 169818589 + Gm22359 snRNA snRNA MGP_NODShiLtJ_T0016475.1 MGP_NODShiLtJ_G0014583.1 mouse_genomes_project X 111519047 111519319 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096109.1 MGP_NODShiLtJ_G0035629.1 mouse_genomes_project X 76887545 76890501 - MGP_NODShiLtJ_P0096109 Ubl4a protein_coding protein_coding MGP_NODShiLtJ_T0096110.1 MGP_NODShiLtJ_G0035629.1 mouse_genomes_project X 76887546 76890386 - Ubl4a protein_coding processed_transcript MGP_NODShiLtJ_T0096111.1 MGP_NODShiLtJ_G0035629.1 mouse_genomes_project X 76889099 76890294 - MGP_NODShiLtJ_P0096111 Ubl4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096112.1 MGP_NODShiLtJ_G0035629.1 mouse_genomes_project X 76889137 76890324 - Ubl4a protein_coding retained_intron MGP_NODShiLtJ_T0096113.1 MGP_NODShiLtJ_G0035629.1 mouse_genomes_project X 76889292 76895043 - MGP_NODShiLtJ_P0096113 Ubl4a protein_coding protein_coding MGP_NODShiLtJ_T0096114.1 MGP_NODShiLtJ_G0035629.1 mouse_genomes_project X 76889570 76890341 - Ubl4a protein_coding retained_intron MGP_NODShiLtJ_T0096115.1 MGP_NODShiLtJ_G0035629.1 mouse_genomes_project X 76889624 76890331 - Ubl4a protein_coding processed_transcript MGP_NODShiLtJ_T0016368.1 MGP_NODShiLtJ_G0014476.1 mouse_genomes_project X 93918589 93918847 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097493.1 MGP_NODShiLtJ_G0036025.1 mouse_genomes_project X 180435182 180468729 + MGP_NODShiLtJ_P0097493 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097494.1 MGP_NODShiLtJ_G0036025.1 mouse_genomes_project X 180438406 180468591 + MGP_NODShiLtJ_P0097494 protein_coding protein_coding MGP_NODShiLtJ_T0016719.1 MGP_NODShiLtJ_G0014827.1 mouse_genomes_project X 170506005 170507556 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095171.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5155920 5333051 - MGP_NODShiLtJ_P0095171 Rpgr protein_coding protein_coding MGP_NODShiLtJ_T0095172.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5254869 5333051 - MGP_NODShiLtJ_P0095172 Rpgr protein_coding protein_coding MGP_NODShiLtJ_T0095173.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5254869 5332584 - MGP_NODShiLtJ_P0095173 Rpgr protein_coding protein_coding MGP_NODShiLtJ_T0095174.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5254869 5333051 - MGP_NODShiLtJ_P0095174 Rpgr protein_coding protein_coding MGP_NODShiLtJ_T0095175.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5255327 5332824 - MGP_NODShiLtJ_P0095175 Rpgr protein_coding protein_coding MGP_NODShiLtJ_T0095176.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5258118 5333051 - MGP_NODShiLtJ_P0095176 Rpgr protein_coding protein_coding MGP_NODShiLtJ_T0095177.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5278911 5332889 - Rpgr protein_coding retained_intron MGP_NODShiLtJ_T0095178.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5323130 5332864 - Rpgr protein_coding retained_intron MGP_NODShiLtJ_T0095179.1 MGP_NODShiLtJ_G0035361.1 mouse_genomes_project X 5329678 5332613 - Rpgr protein_coding processed_transcript MGP_NODShiLtJ_T0098130.1 MGP_NODShiLtJ_G0036542.1 mouse_genomes_project X 110073435 110073536 + Gm26152 rRNA rRNA MGP_NODShiLtJ_T0016334.1 MGP_NODShiLtJ_G0014442.1 mouse_genomes_project X 81957715 81960589 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095864.1 MGP_NODShiLtJ_G0035597.1 mouse_genomes_project X 75931127 76001146 + MGP_NODShiLtJ_P0095864 Atp2b3 protein_coding protein_coding MGP_NODShiLtJ_T0095865.1 MGP_NODShiLtJ_G0035597.1 mouse_genomes_project X 75931127 75988355 + MGP_NODShiLtJ_P0095865 Atp2b3 protein_coding protein_coding MGP_NODShiLtJ_T0095866.1 MGP_NODShiLtJ_G0035597.1 mouse_genomes_project X 75931127 76001146 + MGP_NODShiLtJ_P0095866 Atp2b3 protein_coding protein_coding MGP_NODShiLtJ_T0098214.1 MGP_NODShiLtJ_G0036626.1 mouse_genomes_project X 99662423 99662561 - Gm23557 scaRNA scaRNA MGP_NODShiLtJ_T0016714.1 MGP_NODShiLtJ_G0014822.1 mouse_genomes_project X 169514986 169515633 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102282.1 MGP_NODShiLtJ_G0040448.1 mouse_genomes_project X 168032205 168032883 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016583.1 MGP_NODShiLtJ_G0014691.1 mouse_genomes_project X 139563811 139564475 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096400.1 MGP_NODShiLtJ_G0035713.1 mouse_genomes_project X 105847382 105913931 + MGP_NODShiLtJ_P0096400 Stard8 protein_coding protein_coding MGP_NODShiLtJ_T0096401.1 MGP_NODShiLtJ_G0035713.1 mouse_genomes_project X 105888481 105923038 + MGP_NODShiLtJ_P0096401 Stard8 protein_coding protein_coding MGP_NODShiLtJ_T0096402.1 MGP_NODShiLtJ_G0035713.1 mouse_genomes_project X 105889885 105914082 + Stard8 protein_coding processed_transcript MGP_NODShiLtJ_T0096403.1 MGP_NODShiLtJ_G0035713.1 mouse_genomes_project X 105916918 105918755 + Stard8 protein_coding processed_transcript MGP_NODShiLtJ_T0097017.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153221550 153285616 - MGP_NODShiLtJ_P0097017 Morc4 protein_coding protein_coding MGP_NODShiLtJ_T0097018.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153221816 153260053 - MGP_NODShiLtJ_P0097018 Morc4 protein_coding protein_coding MGP_NODShiLtJ_T0097019.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153221822 153285639 - MGP_NODShiLtJ_P0097019 Morc4 protein_coding protein_coding MGP_NODShiLtJ_T0097020.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153224149 153237836 - Morc4 protein_coding retained_intron MGP_NODShiLtJ_T0097021.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153238205 153257123 - MGP_NODShiLtJ_P0097021 Morc4 protein_coding protein_coding MGP_NODShiLtJ_T0097022.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153258510 153285587 - Morc4 protein_coding retained_intron MGP_NODShiLtJ_T0097023.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153258517 153285584 - Morc4 protein_coding processed_transcript MGP_NODShiLtJ_T0097024.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153260924 153285372 - Morc4 protein_coding retained_intron MGP_NODShiLtJ_T0097025.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153260958 153285335 - MGP_NODShiLtJ_P0097025 Morc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097026.1 MGP_NODShiLtJ_G0035911.1 mouse_genomes_project X 153261072 153285161 - MGP_NODShiLtJ_P0097026 Morc4 protein_coding protein_coding MGP_NODShiLtJ_T0016315.1 MGP_NODShiLtJ_G0014423.1 mouse_genomes_project X 79205445 79205749 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097071.1 MGP_NODShiLtJ_G0035925.1 mouse_genomes_project X 155245762 155269987 - MGP_NODShiLtJ_P0097071 Irs4 protein_coding protein_coding MGP_NODShiLtJ_T0095436.1 MGP_NODShiLtJ_G0035454.1 mouse_genomes_project X 35461960 35528704 - MGP_NODShiLtJ_P0095436 Cul4b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095437.1 MGP_NODShiLtJ_G0035454.1 mouse_genomes_project X 35463622 35495793 - MGP_NODShiLtJ_P0095437 Cul4b protein_coding protein_coding MGP_NODShiLtJ_T0095438.1 MGP_NODShiLtJ_G0035454.1 mouse_genomes_project X 35463622 35518076 - MGP_NODShiLtJ_P0095438 Cul4b protein_coding protein_coding MGP_NODShiLtJ_T0095439.1 MGP_NODShiLtJ_G0035454.1 mouse_genomes_project X 35463918 35495930 - MGP_NODShiLtJ_P0095439 Cul4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095440.1 MGP_NODShiLtJ_G0035454.1 mouse_genomes_project X 35463922 35518063 - MGP_NODShiLtJ_P0095440 Cul4b protein_coding protein_coding MGP_NODShiLtJ_T0016691.1 MGP_NODShiLtJ_G0014799.1 mouse_genomes_project X 164926852 164927131 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102252.1 MGP_NODShiLtJ_G0040418.1 mouse_genomes_project X 80672040 80676118 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011013.1 MGP_NODShiLtJ_G0009146.1 mouse_genomes_project X 11409102 11409166 + Gm22464 miRNA miRNA MGP_NODShiLtJ_T0016129.1 MGP_NODShiLtJ_G0014237.1 mouse_genomes_project X 16804963 16806290 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096074.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76816910 76824630 + MGP_NODShiLtJ_P0096074 Atp6ap1 protein_coding protein_coding MGP_NODShiLtJ_T0096075.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76816956 76822283 + MGP_NODShiLtJ_P0096075 Atp6ap1 protein_coding protein_coding MGP_NODShiLtJ_T0096076.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76816975 76823339 + MGP_NODShiLtJ_P0096076 Atp6ap1 protein_coding protein_coding MGP_NODShiLtJ_T0096077.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76816976 76824598 + MGP_NODShiLtJ_P0096077 Atp6ap1 protein_coding protein_coding MGP_NODShiLtJ_T0096078.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76816990 76821267 + Atp6ap1 protein_coding retained_intron MGP_NODShiLtJ_T0096079.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76817046 76823372 + MGP_NODShiLtJ_P0096079 Atp6ap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096080.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76817075 76822423 + MGP_NODShiLtJ_P0096080 Atp6ap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096081.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76821832 76823142 + Atp6ap1 protein_coding processed_transcript MGP_NODShiLtJ_T0096082.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76822461 76823922 + Atp6ap1 protein_coding retained_intron MGP_NODShiLtJ_T0096083.1 MGP_NODShiLtJ_G0035624.1 mouse_genomes_project X 76823397 76823924 + MGP_NODShiLtJ_P0096083 Atp6ap1 protein_coding protein_coding MGP_NODShiLtJ_T0102261.1 MGP_NODShiLtJ_G0040427.1 mouse_genomes_project X 97669216 97917936 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016346.1 MGP_NODShiLtJ_G0014454.1 mouse_genomes_project X 86482333 86483135 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096116.1 MGP_NODShiLtJ_G0035630.1 mouse_genomes_project X 76891044 76892839 - MGP_NODShiLtJ_P0096116 Slc10a3 protein_coding protein_coding MGP_NODShiLtJ_T0096117.1 MGP_NODShiLtJ_G0035630.1 mouse_genomes_project X 76891044 76895071 - MGP_NODShiLtJ_P0096117 Slc10a3 protein_coding protein_coding MGP_NODShiLtJ_T0096118.1 MGP_NODShiLtJ_G0035630.1 mouse_genomes_project X 76891044 76895130 - MGP_NODShiLtJ_P0096118 Slc10a3 protein_coding protein_coding MGP_NODShiLtJ_T0096119.1 MGP_NODShiLtJ_G0035630.1 mouse_genomes_project X 76891044 76895174 - MGP_NODShiLtJ_P0096119 Slc10a3 protein_coding protein_coding MGP_NODShiLtJ_T0016088.1 MGP_NODShiLtJ_G0014196.1 mouse_genomes_project X 6445531 6446160 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096051.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76801700 76802704 + Taz protein_coding processed_transcript MGP_NODShiLtJ_T0096052.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76801700 76802654 + Taz protein_coding processed_transcript MGP_NODShiLtJ_T0096053.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76801736 76810143 + MGP_NODShiLtJ_P0096053 Taz protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096054.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802485 76809940 + MGP_NODShiLtJ_P0096054 Taz protein_coding protein_coding MGP_NODShiLtJ_T0096055.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802538 76805676 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096056.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802538 76807824 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096057.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802538 76809937 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096058.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802538 76809937 + MGP_NODShiLtJ_P0096058 Taz protein_coding protein_coding MGP_NODShiLtJ_T0096059.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802548 76808068 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096060.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802548 76808493 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096061.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802550 76809937 + MGP_NODShiLtJ_P0096061 Taz protein_coding protein_coding MGP_NODShiLtJ_T0096062.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802554 76803758 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096063.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802560 76808947 + MGP_NODShiLtJ_P0096063 Taz protein_coding protein_coding MGP_NODShiLtJ_T0096064.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802577 76804103 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096065.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802709 76808633 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096066.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802796 76809189 + MGP_NODShiLtJ_P0096066 Taz protein_coding protein_coding MGP_NODShiLtJ_T0096067.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76802870 76809274 + MGP_NODShiLtJ_P0096067 Taz protein_coding protein_coding MGP_NODShiLtJ_T0096068.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76803725 76809137 + MGP_NODShiLtJ_P0096068 Taz protein_coding protein_coding MGP_NODShiLtJ_T0096069.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76807453 76808398 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0096070.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76807808 76809523 + MGP_NODShiLtJ_P0096070 Taz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096071.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76807860 76809677 + MGP_NODShiLtJ_P0096071 Taz protein_coding protein_coding MGP_NODShiLtJ_T0096072.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76808450 76809520 + MGP_NODShiLtJ_P0096072 Taz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096073.1 MGP_NODShiLtJ_G0035623.1 mouse_genomes_project X 76808461 76809470 + Taz protein_coding retained_intron MGP_NODShiLtJ_T0018498.1 MGP_NODShiLtJ_G0015652.1 mouse_genomes_project X 117135220 117293595 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018499.1 MGP_NODShiLtJ_G0015652.1 mouse_genomes_project X 117135306 117140351 + processed_transcript retained_intron MGP_NODShiLtJ_T0018500.1 MGP_NODShiLtJ_G0015652.1 mouse_genomes_project X 117135321 117179375 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018501.1 MGP_NODShiLtJ_G0015652.1 mouse_genomes_project X 117135337 117179579 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018502.1 MGP_NODShiLtJ_G0015652.1 mouse_genomes_project X 117218143 117295082 + processed_transcript processed_transcript MGP_NODShiLtJ_T0095808.1 MGP_NODShiLtJ_G0035573.1 mouse_genomes_project X 74030417 74039403 + MGP_NODShiLtJ_P0095808 Vma21 protein_coding protein_coding MGP_NODShiLtJ_T0095809.1 MGP_NODShiLtJ_G0035573.1 mouse_genomes_project X 74031251 74039403 + MGP_NODShiLtJ_P0095809 Vma21 protein_coding protein_coding MGP_NODShiLtJ_T0095810.1 MGP_NODShiLtJ_G0035573.1 mouse_genomes_project X 74031283 74057489 + Vma21 protein_coding processed_transcript MGP_NODShiLtJ_T0095811.1 MGP_NODShiLtJ_G0035573.1 mouse_genomes_project X 74031283 74039403 + MGP_NODShiLtJ_P0095811 Vma21 protein_coding protein_coding MGP_NODShiLtJ_T0095812.1 MGP_NODShiLtJ_G0035573.1 mouse_genomes_project X 74031306 74035478 + Vma21 protein_coding processed_transcript MGP_NODShiLtJ_T0095256.1 MGP_NODShiLtJ_G0035387.1 mouse_genomes_project X 16284409 16407728 - MGP_NODShiLtJ_P0095256 Slc9a7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095257.1 MGP_NODShiLtJ_G0035387.1 mouse_genomes_project X 16288628 16513195 - MGP_NODShiLtJ_P0095257 Slc9a7 protein_coding protein_coding MGP_NODShiLtJ_T0095258.1 MGP_NODShiLtJ_G0035387.1 mouse_genomes_project X 16301836 16513174 - Slc9a7 protein_coding retained_intron MGP_NODShiLtJ_T0095259.1 MGP_NODShiLtJ_G0035387.1 mouse_genomes_project X 16335994 16513158 - MGP_NODShiLtJ_P0095259 Slc9a7 protein_coding protein_coding MGP_NODShiLtJ_T0095260.1 MGP_NODShiLtJ_G0035387.1 mouse_genomes_project X 16355177 16513195 - Slc9a7 protein_coding retained_intron MGP_NODShiLtJ_T0016157.1 MGP_NODShiLtJ_G0014265.1 mouse_genomes_project X 36844546 36844937 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100963.1 MGP_NODShiLtJ_G0039357.1 mouse_genomes_project X 122986152 122986276 - Gm23985 snoRNA snoRNA MGP_NODShiLtJ_T0096980.1 MGP_NODShiLtJ_G0035897.1 mouse_genomes_project X 150502796 152061464 + MGP_NODShiLtJ_P0096980 Il1rapl2 protein_coding protein_coding MGP_NODShiLtJ_T0096981.1 MGP_NODShiLtJ_G0035897.1 mouse_genomes_project X 150503207 151653359 + Il1rapl2 protein_coding retained_intron MGP_NODShiLtJ_T0096982.1 MGP_NODShiLtJ_G0035897.1 mouse_genomes_project X 150597083 152061165 + MGP_NODShiLtJ_P0096982 Il1rapl2 protein_coding protein_coding MGP_NODShiLtJ_T0016251.1 MGP_NODShiLtJ_G0014359.1 mouse_genomes_project X 62633399 62633901 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002428.1 MGP_NODShiLtJ_G0002337.1 mouse_genomes_project X 39781394 39783587 - TEC TEC MGP_NODShiLtJ_T0016614.1 MGP_NODShiLtJ_G0014722.1 mouse_genomes_project X 148758547 148759267 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095205.1 MGP_NODShiLtJ_G0035369.1 mouse_genomes_project X 8435606 8511135 + MGP_NODShiLtJ_P0095205 Usp9x protein_coding protein_coding MGP_NODShiLtJ_T0095206.1 MGP_NODShiLtJ_G0035369.1 mouse_genomes_project X 8435622 8509847 + Usp9x protein_coding retained_intron MGP_NODShiLtJ_T0095207.1 MGP_NODShiLtJ_G0035369.1 mouse_genomes_project X 8435622 8564300 + MGP_NODShiLtJ_P0095207 Usp9x protein_coding protein_coding MGP_NODShiLtJ_T0095208.1 MGP_NODShiLtJ_G0035369.1 mouse_genomes_project X 8500116 8510919 + MGP_NODShiLtJ_P0095208 Usp9x protein_coding protein_coding MGP_NODShiLtJ_T0095209.1 MGP_NODShiLtJ_G0035369.1 mouse_genomes_project X 8517017 8521624 + Usp9x protein_coding retained_intron MGP_NODShiLtJ_T0095210.1 MGP_NODShiLtJ_G0035369.1 mouse_genomes_project X 8517284 8522836 + Usp9x protein_coding retained_intron MGP_NODShiLtJ_T0095211.1 MGP_NODShiLtJ_G0035369.1 mouse_genomes_project X 8552735 8560870 + MGP_NODShiLtJ_P0095211 Usp9x protein_coding protein_coding MGP_NODShiLtJ_T0016540.1 MGP_NODShiLtJ_G0014648.1 mouse_genomes_project X 124807997 124808630 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016585.1 MGP_NODShiLtJ_G0014693.1 mouse_genomes_project X 140991974 140992760 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009347.1 MGP_NODShiLtJ_G0007489.1 mouse_genomes_project X 164793688 164816675 - Gm15104 lincRNA lincRNA MGP_NODShiLtJ_T0009348.1 MGP_NODShiLtJ_G0007489.1 mouse_genomes_project X 164794038 164794452 - Gm15104 lincRNA lincRNA MGP_NODShiLtJ_T0011096.1 MGP_NODShiLtJ_G0009229.1 mouse_genomes_project X 146531441 146531523 + Mir3112 miRNA miRNA MGP_NODShiLtJ_T0011668.1 MGP_NODShiLtJ_G0009801.1 mouse_genomes_project X 151208986 151209245 - Gm24675 misc_RNA misc_RNA MGP_NODShiLtJ_T0096586.1 MGP_NODShiLtJ_G0035758.1 mouse_genomes_project X 110111951 110153171 + MGP_NODShiLtJ_P0096586 1700031F05Rik protein_coding protein_coding MGP_NODShiLtJ_T0096225.1 MGP_NODShiLtJ_G0035656.1 mouse_genomes_project X 80785767 80804286 - MGP_NODShiLtJ_P0096225 Pbsn protein_coding protein_coding MGP_NODShiLtJ_T0096226.1 MGP_NODShiLtJ_G0035656.1 mouse_genomes_project X 80785768 80804193 - MGP_NODShiLtJ_P0096226 Pbsn protein_coding protein_coding MGP_NODShiLtJ_T0016498.1 MGP_NODShiLtJ_G0014606.1 mouse_genomes_project X 114715721 114716013 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005517.1 MGP_NODShiLtJ_G0004645.1 mouse_genomes_project X 44821871 44912794 - antisense antisense MGP_NODShiLtJ_T0096825.1 MGP_NODShiLtJ_G0035846.1 mouse_genomes_project X 147023821 147031880 - MGP_NODShiLtJ_P0096825 protein_coding protein_coding MGP_NODShiLtJ_T0016379.1 MGP_NODShiLtJ_G0014487.1 mouse_genomes_project X 95562794 95563550 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096432.1 MGP_NODShiLtJ_G0035724.1 mouse_genomes_project X 107602457 107615460 + MGP_NODShiLtJ_P0096432 Arr3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096433.1 MGP_NODShiLtJ_G0035724.1 mouse_genomes_project X 107602461 107615566 + MGP_NODShiLtJ_P0096433 Arr3 protein_coding protein_coding MGP_NODShiLtJ_T0096434.1 MGP_NODShiLtJ_G0035724.1 mouse_genomes_project X 107602487 107610702 + Arr3 protein_coding retained_intron MGP_NODShiLtJ_T0096435.1 MGP_NODShiLtJ_G0035724.1 mouse_genomes_project X 107602508 107610142 + Arr3 protein_coding retained_intron MGP_NODShiLtJ_T0096436.1 MGP_NODShiLtJ_G0035724.1 mouse_genomes_project X 107602519 107610910 + Arr3 protein_coding retained_intron MGP_NODShiLtJ_T0096437.1 MGP_NODShiLtJ_G0035724.1 mouse_genomes_project X 107602526 107615566 + Arr3 protein_coding retained_intron MGP_NODShiLtJ_T0096438.1 MGP_NODShiLtJ_G0035724.1 mouse_genomes_project X 107602611 107609012 + MGP_NODShiLtJ_P0096438 Arr3 protein_coding protein_coding MGP_NODShiLtJ_T0096439.1 MGP_NODShiLtJ_G0035724.1 mouse_genomes_project X 107608906 107611509 + Arr3 protein_coding retained_intron MGP_NODShiLtJ_T0016754.1 MGP_NODShiLtJ_G0014862.1 mouse_genomes_project X 177340360 177340964 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016750.1 MGP_NODShiLtJ_G0014858.1 mouse_genomes_project X 176278823 176279305 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016189.1 MGP_NODShiLtJ_G0014297.1 mouse_genomes_project X 46237981 46238986 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016223.1 MGP_NODShiLtJ_G0014331.1 mouse_genomes_project X 57617368 57617954 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095003.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2496969 2501242 + MGP_NODShiLtJ_P0095003 Wdr45 protein_coding protein_coding MGP_NODShiLtJ_T0095004.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2497236 2502931 + MGP_NODShiLtJ_P0095004 Wdr45 protein_coding protein_coding MGP_NODShiLtJ_T0095005.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2497246 2503123 + MGP_NODShiLtJ_P0095005 Wdr45 protein_coding protein_coding MGP_NODShiLtJ_T0095006.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2497246 2501242 + MGP_NODShiLtJ_P0095006 Wdr45 protein_coding protein_coding MGP_NODShiLtJ_T0095007.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2497351 2499237 + MGP_NODShiLtJ_P0095007 Wdr45 protein_coding protein_coding MGP_NODShiLtJ_T0095008.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2497353 2501226 + MGP_NODShiLtJ_P0095008 Wdr45 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095009.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2497358 2501241 + MGP_NODShiLtJ_P0095009 Wdr45 protein_coding protein_coding MGP_NODShiLtJ_T0095010.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2497729 2501282 + Wdr45 protein_coding processed_transcript MGP_NODShiLtJ_T0095011.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2498276 2500977 + MGP_NODShiLtJ_P0095011 Wdr45 protein_coding protein_coding MGP_NODShiLtJ_T0095012.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2498490 2500830 + Wdr45 protein_coding processed_transcript MGP_NODShiLtJ_T0095013.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2498811 2503135 + MGP_NODShiLtJ_P0095013 Wdr45 protein_coding protein_coding MGP_NODShiLtJ_T0095014.1 MGP_NODShiLtJ_G0035316.1 mouse_genomes_project X 2501522 2502440 + Wdr45 protein_coding processed_transcript MGP_NODShiLtJ_T0016624.1 MGP_NODShiLtJ_G0014732.1 mouse_genomes_project X 149799640 149800762 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016060.1 MGP_NODShiLtJ_G0014168.1 mouse_genomes_project X 630919 631159 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095582.1 MGP_NODShiLtJ_G0035491.1 mouse_genomes_project X 48699944 48700904 - MGP_NODShiLtJ_P0095582 Olfr1321 protein_coding protein_coding MGP_NODShiLtJ_T0097064.1 MGP_NODShiLtJ_G0035923.1 mouse_genomes_project X 154588717 154957122 - MGP_NODShiLtJ_P0097064 Col4a6 protein_coding protein_coding MGP_NODShiLtJ_T0097065.1 MGP_NODShiLtJ_G0035923.1 mouse_genomes_project X 154610313 154631722 - Col4a6 protein_coding processed_transcript MGP_NODShiLtJ_T0097066.1 MGP_NODShiLtJ_G0035923.1 mouse_genomes_project X 154613881 154616762 - Col4a6 protein_coding retained_intron MGP_NODShiLtJ_T0097385.1 MGP_NODShiLtJ_G0035998.1 mouse_genomes_project X 175300882 175399265 + MGP_NODShiLtJ_P0097385 Map7d2 protein_coding protein_coding MGP_NODShiLtJ_T0097386.1 MGP_NODShiLtJ_G0035998.1 mouse_genomes_project X 175335172 175391312 + MGP_NODShiLtJ_P0097386 Map7d2 protein_coding protein_coding MGP_NODShiLtJ_T0097387.1 MGP_NODShiLtJ_G0035998.1 mouse_genomes_project X 175349052 175387632 + MGP_NODShiLtJ_P0097387 Map7d2 protein_coding protein_coding MGP_NODShiLtJ_T0097388.1 MGP_NODShiLtJ_G0035998.1 mouse_genomes_project X 175349064 175368249 + MGP_NODShiLtJ_P0097388 Map7d2 protein_coding protein_coding MGP_NODShiLtJ_T0016631.1 MGP_NODShiLtJ_G0014739.1 mouse_genomes_project X 151120304 151120511 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095929.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76363572 76384719 - MGP_NODShiLtJ_P0095929 Arhgap4 protein_coding protein_coding MGP_NODShiLtJ_T0095934.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366482 76384713 - MGP_NODShiLtJ_P0095934 Arhgap4 protein_coding protein_coding MGP_NODShiLtJ_T0095935.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366488 76384679 - MGP_NODShiLtJ_P0095935 Arhgap4 protein_coding protein_coding MGP_NODShiLtJ_T0095936.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366662 76384654 - Arhgap4 protein_coding retained_intron MGP_NODShiLtJ_T0095937.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366662 76384654 - Arhgap4 protein_coding retained_intron MGP_NODShiLtJ_T0095938.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366662 76384654 - Arhgap4 protein_coding retained_intron MGP_NODShiLtJ_T0095939.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366662 76384654 - Arhgap4 protein_coding retained_intron MGP_NODShiLtJ_T0095940.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366662 76384654 - Arhgap4 protein_coding retained_intron MGP_NODShiLtJ_T0095941.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366662 76384654 - MGP_NODShiLtJ_P0095941 Arhgap4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095942.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366662 76384654 - MGP_NODShiLtJ_P0095942 Arhgap4 protein_coding protein_coding MGP_NODShiLtJ_T0095943.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366668 76384654 - MGP_NODShiLtJ_P0095943 Arhgap4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095944.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76366806 76384612 - MGP_NODShiLtJ_P0095944 Arhgap4 protein_coding protein_coding MGP_NODShiLtJ_T0095945.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76368541 76369557 - Arhgap4 protein_coding processed_transcript MGP_NODShiLtJ_T0095946.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76368944 76370197 - MGP_NODShiLtJ_P0095946 Arhgap4 protein_coding protein_coding MGP_NODShiLtJ_T0095947.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76369001 76371757 - MGP_NODShiLtJ_P0095947 Arhgap4 protein_coding protein_coding MGP_NODShiLtJ_T0095948.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76371443 76395222 - Arhgap4 protein_coding retained_intron MGP_NODShiLtJ_T0095949.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76371447 76372869 - Arhgap4 protein_coding processed_transcript MGP_NODShiLtJ_T0095950.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76372239 76379041 - MGP_NODShiLtJ_P0095950 Arhgap4 protein_coding protein_coding MGP_NODShiLtJ_T0095951.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76379769 76384681 - Arhgap4 protein_coding processed_transcript MGP_NODShiLtJ_T0095952.1 MGP_NODShiLtJ_G0035609.1 mouse_genomes_project X 76380162 76384676 - MGP_NODShiLtJ_P0095952 Arhgap4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0016785.1 MGP_NODShiLtJ_G0014893.1 mouse_genomes_project X 185303366 185303699 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095415.1 MGP_NODShiLtJ_G0035447.1 mouse_genomes_project X 34944800 34954401 - MGP_NODShiLtJ_P0095415 Rhox11 protein_coding protein_coding MGP_NODShiLtJ_T0095335.1 MGP_NODShiLtJ_G0035408.1 mouse_genomes_project X 18159772 18207359 + MGP_NODShiLtJ_P0095335 Slc6a14 protein_coding protein_coding MGP_NODShiLtJ_T0016548.1 MGP_NODShiLtJ_G0014656.1 mouse_genomes_project X 127049431 127049699 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099710.1 MGP_NODShiLtJ_G0038104.1 mouse_genomes_project X 159135566 159135723 + Gm25097 snRNA snRNA MGP_NODShiLtJ_T0011050.1 MGP_NODShiLtJ_G0009183.1 mouse_genomes_project X 68087117 68087193 - Mir883a miRNA miRNA MGP_NODShiLtJ_T0094948.1 MGP_NODShiLtJ_G0035301.1 mouse_genomes_project X 1525469 1658867 + MGP_NODShiLtJ_P0094948 Dgkk protein_coding protein_coding MGP_NODShiLtJ_T0094949.1 MGP_NODShiLtJ_G0035301.1 mouse_genomes_project X 1561674 1658877 + MGP_NODShiLtJ_P0094949 Dgkk protein_coding protein_coding MGP_NODShiLtJ_T0016472.1 MGP_NODShiLtJ_G0014580.1 mouse_genomes_project X 111276004 111276312 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096406.1 MGP_NODShiLtJ_G0035715.1 mouse_genomes_project X 106338212 106343718 - MGP_NODShiLtJ_P0096406 Pja1 protein_coding protein_coding MGP_NODShiLtJ_T0096407.1 MGP_NODShiLtJ_G0035715.1 mouse_genomes_project X 106338216 106343162 - MGP_NODShiLtJ_P0096407 Pja1 protein_coding protein_coding MGP_NODShiLtJ_T0096408.1 MGP_NODShiLtJ_G0035715.1 mouse_genomes_project X 106338246 106343210 - MGP_NODShiLtJ_P0096408 Pja1 protein_coding protein_coding MGP_NODShiLtJ_T0096409.1 MGP_NODShiLtJ_G0035715.1 mouse_genomes_project X 106338593 106343167 - MGP_NODShiLtJ_P0096409 Pja1 protein_coding protein_coding MGP_NODShiLtJ_T0096410.1 MGP_NODShiLtJ_G0035715.1 mouse_genomes_project X 106338625 106343147 - MGP_NODShiLtJ_P0096410 Pja1 protein_coding protein_coding MGP_NODShiLtJ_T0100990.1 MGP_NODShiLtJ_G0039384.1 mouse_genomes_project X 186597876 186597995 - Gm25651 snoRNA snoRNA MGP_NODShiLtJ_T0016675.1 MGP_NODShiLtJ_G0014783.1 mouse_genomes_project X 159210297 159210931 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016279.1 MGP_NODShiLtJ_G0014387.1 mouse_genomes_project X 70336543 70337801 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097585.1 MGP_NODShiLtJ_G0036050.1 mouse_genomes_project X 185578523 186135209 + MGP_NODShiLtJ_P0097585 Arhgap6 protein_coding protein_coding MGP_NODShiLtJ_T0097586.1 MGP_NODShiLtJ_G0036050.1 mouse_genomes_project X 185835146 186079067 + Arhgap6 protein_coding retained_intron MGP_NODShiLtJ_T0097587.1 MGP_NODShiLtJ_G0036050.1 mouse_genomes_project X 185835146 186082615 + MGP_NODShiLtJ_P0097587 Arhgap6 protein_coding protein_coding MGP_NODShiLtJ_T0097588.1 MGP_NODShiLtJ_G0036050.1 mouse_genomes_project X 185835146 186089550 + MGP_NODShiLtJ_P0097588 Arhgap6 protein_coding protein_coding MGP_NODShiLtJ_T0097589.1 MGP_NODShiLtJ_G0036050.1 mouse_genomes_project X 185835146 186135209 + MGP_NODShiLtJ_P0097589 Arhgap6 protein_coding protein_coding MGP_NODShiLtJ_T0097590.1 MGP_NODShiLtJ_G0036050.1 mouse_genomes_project X 185835146 186135209 + MGP_NODShiLtJ_P0097590 Arhgap6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097591.1 MGP_NODShiLtJ_G0036050.1 mouse_genomes_project X 185915397 186135209 + MGP_NODShiLtJ_P0097591 Arhgap6 protein_coding protein_coding MGP_NODShiLtJ_T0097595.1 MGP_NODShiLtJ_G0036050.1 mouse_genomes_project X 186034575 186125885 + MGP_NODShiLtJ_P0097595 Arhgap6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0016426.1 MGP_NODShiLtJ_G0014534.1 mouse_genomes_project X 105332761 105333247 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095109.1 MGP_NODShiLtJ_G0035337.1 mouse_genomes_project X 2980566 2982800 - Rbm3 protein_coding processed_transcript MGP_NODShiLtJ_T0095110.1 MGP_NODShiLtJ_G0035337.1 mouse_genomes_project X 2980569 2987727 - MGP_NODShiLtJ_P0095110 Rbm3 protein_coding protein_coding MGP_NODShiLtJ_T0095111.1 MGP_NODShiLtJ_G0035337.1 mouse_genomes_project X 2982375 2987709 - MGP_NODShiLtJ_P0095111 Rbm3 protein_coding protein_coding MGP_NODShiLtJ_T0095112.1 MGP_NODShiLtJ_G0035337.1 mouse_genomes_project X 2984252 2987727 - MGP_NODShiLtJ_P0095112 Rbm3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095113.1 MGP_NODShiLtJ_G0035337.1 mouse_genomes_project X 2984475 2987752 - Rbm3 protein_coding retained_intron MGP_NODShiLtJ_T0095114.1 MGP_NODShiLtJ_G0035337.1 mouse_genomes_project X 2984496 2987761 - MGP_NODShiLtJ_P0095114 Rbm3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095115.1 MGP_NODShiLtJ_G0035337.1 mouse_genomes_project X 2986503 2987789 - Rbm3 protein_coding retained_intron MGP_NODShiLtJ_T0016576.1 MGP_NODShiLtJ_G0014684.1 mouse_genomes_project X 133148434 133148737 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095399.1 MGP_NODShiLtJ_G0035436.1 mouse_genomes_project X 34107420 34123484 - MGP_NODShiLtJ_P0095399 Rhox1 protein_coding protein_coding MGP_NODShiLtJ_T0095060.1 MGP_NODShiLtJ_G0035324.1 mouse_genomes_project X 2684892 2695299 + MGP_NODShiLtJ_P0095060 Slc35a2 protein_coding protein_coding MGP_NODShiLtJ_T0095061.1 MGP_NODShiLtJ_G0035324.1 mouse_genomes_project X 2685096 2695271 + MGP_NODShiLtJ_P0095061 Slc35a2 protein_coding protein_coding MGP_NODShiLtJ_T0095062.1 MGP_NODShiLtJ_G0035324.1 mouse_genomes_project X 2685176 2694834 + MGP_NODShiLtJ_P0095062 Slc35a2 protein_coding protein_coding MGP_NODShiLtJ_T0095063.1 MGP_NODShiLtJ_G0035324.1 mouse_genomes_project X 2685231 2695269 + MGP_NODShiLtJ_P0095063 Slc35a2 protein_coding protein_coding MGP_NODShiLtJ_T0095064.1 MGP_NODShiLtJ_G0035324.1 mouse_genomes_project X 2686689 2695267 + MGP_NODShiLtJ_P0095064 Slc35a2 protein_coding protein_coding MGP_NODShiLtJ_T0095065.1 MGP_NODShiLtJ_G0035324.1 mouse_genomes_project X 2693819 2695271 + Slc35a2 protein_coding processed_transcript MGP_NODShiLtJ_T0016136.1 MGP_NODShiLtJ_G0014244.1 mouse_genomes_project X 18753401 18755370 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100960.1 MGP_NODShiLtJ_G0039354.1 mouse_genomes_project X 108203729 108203849 - Gm24061 snoRNA snoRNA MGP_NODShiLtJ_T0097006.1 MGP_NODShiLtJ_G0035906.1 mouse_genomes_project X 152922745 153052402 + MGP_NODShiLtJ_P0097006 Rnf128 protein_coding protein_coding MGP_NODShiLtJ_T0097007.1 MGP_NODShiLtJ_G0035906.1 mouse_genomes_project X 152973147 153052409 + MGP_NODShiLtJ_P0097007 Rnf128 protein_coding protein_coding MGP_NODShiLtJ_T0097008.1 MGP_NODShiLtJ_G0035906.1 mouse_genomes_project X 152973894 153051005 + Rnf128 protein_coding processed_transcript MGP_NODShiLtJ_T0016523.1 MGP_NODShiLtJ_G0014631.1 mouse_genomes_project X 121643381 121645005 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095522.1 MGP_NODShiLtJ_G0035474.1 mouse_genomes_project X 46836165 46845763 - MGP_NODShiLtJ_P0095522 Apln protein_coding protein_coding MGP_NODShiLtJ_T0011048.1 MGP_NODShiLtJ_G0009181.1 mouse_genomes_project X 68079818 68079895 - Mir743b miRNA miRNA MGP_NODShiLtJ_T0016214.1 MGP_NODShiLtJ_G0014322.1 mouse_genomes_project X 53274614 53275341 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009350.1 MGP_NODShiLtJ_G0007491.1 mouse_genomes_project X 165756614 165759605 + Gm15138 lincRNA lincRNA MGP_NODShiLtJ_T0016725.1 MGP_NODShiLtJ_G0014833.1 mouse_genomes_project X 172299439 172299722 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016091.1 MGP_NODShiLtJ_G0014199.1 mouse_genomes_project X 7106962 7107403 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016187.1 MGP_NODShiLtJ_G0014295.1 mouse_genomes_project X 46149489 46150391 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099695.1 MGP_NODShiLtJ_G0038089.1 mouse_genomes_project X 114427058 114427220 - Gm24622 snRNA snRNA MGP_NODShiLtJ_T0016199.1 MGP_NODShiLtJ_G0014307.1 mouse_genomes_project X 50152999 50153856 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016621.1 MGP_NODShiLtJ_G0014729.1 mouse_genomes_project X 149584920 149585258 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016345.1 MGP_NODShiLtJ_G0014453.1 mouse_genomes_project X 86206041 86207191 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098126.1 MGP_NODShiLtJ_G0036538.1 mouse_genomes_project X 73241122 73241240 + n-R5s8 rRNA rRNA MGP_NODShiLtJ_T0095845.1 MGP_NODShiLtJ_G0035589.1 mouse_genomes_project X 75576400 75578905 + MGP_NODShiLtJ_P0095845 F8a protein_coding protein_coding MGP_NODShiLtJ_T0097439.1 MGP_NODShiLtJ_G0036008.1 mouse_genomes_project X 176938469 176943406 - MGP_NODShiLtJ_P0097439 Gja6 protein_coding protein_coding MGP_NODShiLtJ_T0097418.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176488784 176520293 + MGP_NODShiLtJ_P0097418 Phka2 protein_coding protein_coding MGP_NODShiLtJ_T0097419.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176489046 176522330 + Phka2 protein_coding retained_intron MGP_NODShiLtJ_T0097420.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176489046 176596179 + MGP_NODShiLtJ_P0097420 Phka2 protein_coding protein_coding MGP_NODShiLtJ_T0097421.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176489077 176548725 + MGP_NODShiLtJ_P0097421 Phka2 protein_coding protein_coding MGP_NODShiLtJ_T0097422.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176489424 176580580 + MGP_NODShiLtJ_P0097422 Phka2 protein_coding protein_coding MGP_NODShiLtJ_T0097423.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176515864 176531269 + Phka2 protein_coding processed_transcript MGP_NODShiLtJ_T0097424.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176515874 176531264 + Phka2 protein_coding processed_transcript MGP_NODShiLtJ_T0097425.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176523413 176580612 + Phka2 protein_coding processed_transcript MGP_NODShiLtJ_T0097426.1 MGP_NODShiLtJ_G0036004.1 mouse_genomes_project X 176547556 176552519 + Phka2 protein_coding processed_transcript MGP_NODShiLtJ_T0009342.1 MGP_NODShiLtJ_G0007484.1 mouse_genomes_project X 140446475 140449315 + lincRNA lincRNA MGP_NODShiLtJ_T0095218.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8932316 9231609 - MGP_NODShiLtJ_P0095218 Cask protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095219.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8932320 9296242 - MGP_NODShiLtJ_P0095219 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095220.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8932320 9231590 - MGP_NODShiLtJ_P0095220 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095221.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8932320 9296279 - MGP_NODShiLtJ_P0095221 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095222.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8936611 9296257 - MGP_NODShiLtJ_P0095222 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095223.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8937062 8942049 - MGP_NODShiLtJ_P0095223 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095224.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8937360 8952946 - MGP_NODShiLtJ_P0095224 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095225.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8948616 8976163 - MGP_NODShiLtJ_P0095225 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095226.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8971014 9296279 - Cask protein_coding retained_intron MGP_NODShiLtJ_T0095227.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 8987913 9104342 - MGP_NODShiLtJ_P0095227 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095228.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 9054338 9295789 - MGP_NODShiLtJ_P0095228 Cask protein_coding protein_coding MGP_NODShiLtJ_T0095232.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 9147990 9301068 - Cask protein_coding processed_transcript MGP_NODShiLtJ_T0095233.1 MGP_NODShiLtJ_G0035372.1 mouse_genomes_project X 9295790 9296436 - Cask protein_coding processed_transcript MGP_NODShiLtJ_T0005525.1 MGP_NODShiLtJ_G0004652.1 mouse_genomes_project X 61071511 61086489 + antisense antisense MGP_NODShiLtJ_T0011034.1 MGP_NODShiLtJ_G0009167.1 mouse_genomes_project X 51992920 51992985 - Mir106a miRNA miRNA MGP_NODShiLtJ_T0102284.1 MGP_NODShiLtJ_G0040450.1 mouse_genomes_project X 169286479 169289495 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016400.1 MGP_NODShiLtJ_G0014508.1 mouse_genomes_project X 100515214 100515915 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097507.1 MGP_NODShiLtJ_G0036030.1 mouse_genomes_project X 180793733 180807853 + MGP_NODShiLtJ_P0097507 Piga protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097508.1 MGP_NODShiLtJ_G0036030.1 mouse_genomes_project X 180793733 180807848 + MGP_NODShiLtJ_P0097508 Piga protein_coding protein_coding MGP_NODShiLtJ_T0097509.1 MGP_NODShiLtJ_G0036030.1 mouse_genomes_project X 180793758 180807846 + MGP_NODShiLtJ_P0097509 Piga protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097510.1 MGP_NODShiLtJ_G0036030.1 mouse_genomes_project X 180793849 180807850 + MGP_NODShiLtJ_P0097510 Piga protein_coding protein_coding MGP_NODShiLtJ_T0097511.1 MGP_NODShiLtJ_G0036030.1 mouse_genomes_project X 180796526 180805915 + MGP_NODShiLtJ_P0097511 Piga protein_coding protein_coding MGP_NODShiLtJ_T0097512.1 MGP_NODShiLtJ_G0036030.1 mouse_genomes_project X 180799456 180806002 + Piga protein_coding retained_intron MGP_NODShiLtJ_T0096719.1 MGP_NODShiLtJ_G0035806.1 mouse_genomes_project X 120328635 120487265 - MGP_NODShiLtJ_P0096719 Hdx protein_coding protein_coding MGP_NODShiLtJ_T0097495.1 MGP_NODShiLtJ_G0036026.1 mouse_genomes_project X 180495400 180548453 + MGP_NODShiLtJ_P0097495 Ace2 protein_coding protein_coding MGP_NODShiLtJ_T0097496.1 MGP_NODShiLtJ_G0036026.1 mouse_genomes_project X 180496546 180548453 + MGP_NODShiLtJ_P0097496 Ace2 protein_coding protein_coding MGP_NODShiLtJ_T0097497.1 MGP_NODShiLtJ_G0036026.1 mouse_genomes_project X 180520242 180545857 + MGP_NODShiLtJ_P0097497 Ace2 protein_coding protein_coding MGP_NODShiLtJ_T0102258.1 MGP_NODShiLtJ_G0040424.1 mouse_genomes_project X 90906712 90907753 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095589.1 MGP_NODShiLtJ_G0035493.1 mouse_genomes_project X 48900258 48901191 - MGP_NODShiLtJ_P0095589 Olfr1322 protein_coding protein_coding MGP_NODShiLtJ_T0097313.1 MGP_NODShiLtJ_G0035976.1 mouse_genomes_project X 168525405 168526236 + MGP_NODShiLtJ_P0097313 Cypt3 protein_coding protein_coding MGP_NODShiLtJ_T0097314.1 MGP_NODShiLtJ_G0035976.1 mouse_genomes_project X 168525405 168526242 + MGP_NODShiLtJ_P0097314 Cypt3 protein_coding protein_coding MGP_NODShiLtJ_T0096675.1 MGP_NODShiLtJ_G0035788.1 mouse_genomes_project X 115008517 115029940 + MGP_NODShiLtJ_P0096675 P2ry10 protein_coding protein_coding MGP_NODShiLtJ_T0096676.1 MGP_NODShiLtJ_G0035788.1 mouse_genomes_project X 115009259 115029944 + MGP_NODShiLtJ_P0096676 P2ry10 protein_coding protein_coding MGP_NODShiLtJ_T0096677.1 MGP_NODShiLtJ_G0035788.1 mouse_genomes_project X 115009303 115029944 + MGP_NODShiLtJ_P0096677 P2ry10 protein_coding protein_coding MGP_NODShiLtJ_T0016111.1 MGP_NODShiLtJ_G0014219.1 mouse_genomes_project X 12025748 12026135 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097489.1 MGP_NODShiLtJ_G0036023.1 mouse_genomes_project X 180412062 180417787 - MGP_NODShiLtJ_P0097489 protein_coding protein_coding MGP_NODShiLtJ_T0096692.1 MGP_NODShiLtJ_G0035793.1 mouse_genomes_project X 115888358 115917535 - MGP_NODShiLtJ_P0096692 protein_coding protein_coding MGP_NODShiLtJ_T0011006.1 MGP_NODShiLtJ_G0009139.1 mouse_genomes_project X 1973781 1973890 - Mir501 miRNA miRNA MGP_NODShiLtJ_T0096887.1 MGP_NODShiLtJ_G0035867.1 mouse_genomes_project X 148434951 148442454 - MGP_NODShiLtJ_P0096887 protein_coding protein_coding MGP_NODShiLtJ_T0096888.1 MGP_NODShiLtJ_G0035867.1 mouse_genomes_project X 148434951 148436958 - MGP_NODShiLtJ_P0096888 protein_coding protein_coding MGP_NODShiLtJ_T0095767.1 MGP_NODShiLtJ_G0035566.1 mouse_genomes_project X 72511923 72534602 - MGP_NODShiLtJ_P0095767 Tmem185a protein_coding protein_coding MGP_NODShiLtJ_T0095768.1 MGP_NODShiLtJ_G0035566.1 mouse_genomes_project X 72513129 72534602 - MGP_NODShiLtJ_P0095768 Tmem185a protein_coding protein_coding MGP_NODShiLtJ_T0095769.1 MGP_NODShiLtJ_G0035566.1 mouse_genomes_project X 72513224 72527601 - Tmem185a protein_coding processed_transcript MGP_NODShiLtJ_T0095770.1 MGP_NODShiLtJ_G0035566.1 mouse_genomes_project X 72515093 72534564 - Tmem185a protein_coding processed_transcript MGP_NODShiLtJ_T0016130.1 MGP_NODShiLtJ_G0014238.1 mouse_genomes_project X 17153666 17154036 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016078.1 MGP_NODShiLtJ_G0014186.1 mouse_genomes_project X 3948161 3949212 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096232.1 MGP_NODShiLtJ_G0035662.1 mouse_genomes_project X 81493623 81630260 - protein_coding retained_intron MGP_NODShiLtJ_T0096233.1 MGP_NODShiLtJ_G0035662.1 mouse_genomes_project X 81493640 81630374 - protein_coding retained_intron MGP_NODShiLtJ_T0096234.1 MGP_NODShiLtJ_G0035662.1 mouse_genomes_project X 81496716 81630372 - MGP_NODShiLtJ_P0096234 protein_coding protein_coding MGP_NODShiLtJ_T0096235.1 MGP_NODShiLtJ_G0035662.1 mouse_genomes_project X 81556129 81630369 - protein_coding retained_intron MGP_NODShiLtJ_T0096236.1 MGP_NODShiLtJ_G0035662.1 mouse_genomes_project X 81559162 81630368 - protein_coding retained_intron MGP_NODShiLtJ_T0096711.1 MGP_NODShiLtJ_G0035804.1 mouse_genomes_project X 119944166 119944520 + MGP_NODShiLtJ_P0096711 Gm10112 protein_coding protein_coding MGP_NODShiLtJ_T0011089.1 MGP_NODShiLtJ_G0009222.1 mouse_genomes_project X 111595000 111595091 + Gm24993 miRNA miRNA MGP_NODShiLtJ_T0096541.1 MGP_NODShiLtJ_G0035744.1 mouse_genomes_project X 108855027 108857762 - MGP_NODShiLtJ_P0096541 Cxcr3 protein_coding protein_coding MGP_NODShiLtJ_T0016192.1 MGP_NODShiLtJ_G0014300.1 mouse_genomes_project X 47794955 47795252 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095450.1 MGP_NODShiLtJ_G0035459.1 mouse_genomes_project X 36980356 36981154 - MGP_NODShiLtJ_P0095450 Cypt15 protein_coding protein_coding MGP_NODShiLtJ_T0016776.1 MGP_NODShiLtJ_G0014884.1 mouse_genomes_project X 183066968 183068366 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102269.1 MGP_NODShiLtJ_G0040435.1 mouse_genomes_project X 110101116 110125770 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016343.1 MGP_NODShiLtJ_G0014451.1 mouse_genomes_project X 85467835 85472524 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095212.1 MGP_NODShiLtJ_G0035370.1 mouse_genomes_project X 8684441 8697886 + MGP_NODShiLtJ_P0095212 Ddx3x protein_coding protein_coding MGP_NODShiLtJ_T0095213.1 MGP_NODShiLtJ_G0035370.1 mouse_genomes_project X 8684493 8695494 + Ddx3x protein_coding processed_transcript MGP_NODShiLtJ_T0095214.1 MGP_NODShiLtJ_G0035370.1 mouse_genomes_project X 8684503 8691344 + Ddx3x protein_coding retained_intron MGP_NODShiLtJ_T0095215.1 MGP_NODShiLtJ_G0035370.1 mouse_genomes_project X 8690755 8692324 + Ddx3x protein_coding retained_intron MGP_NODShiLtJ_T0095216.1 MGP_NODShiLtJ_G0035370.1 mouse_genomes_project X 8691256 8693387 + Ddx3x protein_coding retained_intron MGP_NODShiLtJ_T0096610.1 MGP_NODShiLtJ_G0035772.1 mouse_genomes_project X 112477334 112479650 - MGP_NODShiLtJ_P0096610 Magee2 protein_coding protein_coding MGP_NODShiLtJ_T0096231.1 MGP_NODShiLtJ_G0035661.1 mouse_genomes_project X 81369200 81370686 + MGP_NODShiLtJ_P0096231 4930480E11Rik protein_coding protein_coding MGP_NODShiLtJ_T0096201.1 MGP_NODShiLtJ_G0035645.1 mouse_genomes_project X 78119279 78156110 + MGP_NODShiLtJ_P0096201 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096202.1 MGP_NODShiLtJ_G0035645.1 mouse_genomes_project X 78119287 78156135 + protein_coding retained_intron MGP_NODShiLtJ_T0096203.1 MGP_NODShiLtJ_G0035645.1 mouse_genomes_project X 78119303 78139101 + MGP_NODShiLtJ_P0096203 protein_coding protein_coding MGP_NODShiLtJ_T0096204.1 MGP_NODShiLtJ_G0035645.1 mouse_genomes_project X 78119894 78136585 + MGP_NODShiLtJ_P0096204 protein_coding protein_coding MGP_NODShiLtJ_T0095120.1 MGP_NODShiLtJ_G0035339.1 mouse_genomes_project X 3028982 3037937 - MGP_NODShiLtJ_P0095120 Ebp protein_coding protein_coding MGP_NODShiLtJ_T0095121.1 MGP_NODShiLtJ_G0035339.1 mouse_genomes_project X 3028984 3030826 - Ebp protein_coding retained_intron MGP_NODShiLtJ_T0095122.1 MGP_NODShiLtJ_G0035339.1 mouse_genomes_project X 3030399 3037825 - MGP_NODShiLtJ_P0095122 Ebp protein_coding protein_coding MGP_NODShiLtJ_T0095123.1 MGP_NODShiLtJ_G0035339.1 mouse_genomes_project X 3032884 3037323 - Ebp protein_coding retained_intron MGP_NODShiLtJ_T0016170.1 MGP_NODShiLtJ_G0014278.1 mouse_genomes_project X 39756975 39759461 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005530.1 MGP_NODShiLtJ_G0004656.1 mouse_genomes_project X 75820530 75831376 - Gm26726 antisense antisense MGP_NODShiLtJ_T0016610.1 MGP_NODShiLtJ_G0014718.1 mouse_genomes_project X 147467910 147468543 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016288.1 MGP_NODShiLtJ_G0014396.1 mouse_genomes_project X 72705908 72706284 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095728.1 MGP_NODShiLtJ_G0035548.1 mouse_genomes_project X 62725718 62734296 + MGP_NODShiLtJ_P0095728 4933402E13Rik protein_coding protein_coding MGP_NODShiLtJ_T0095729.1 MGP_NODShiLtJ_G0035548.1 mouse_genomes_project X 62729359 62734296 + MGP_NODShiLtJ_P0095729 4933402E13Rik protein_coding protein_coding MGP_NODShiLtJ_T0095238.1 MGP_NODShiLtJ_G0035378.1 mouse_genomes_project X 12399898 12486910 + MGP_NODShiLtJ_P0095238 Maoa protein_coding protein_coding MGP_NODShiLtJ_T0097151.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164892471 164936521 - MGP_NODShiLtJ_P0097151 Tmem29 protein_coding protein_coding MGP_NODShiLtJ_T0097152.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164892471 164954579 - MGP_NODShiLtJ_P0097152 Tmem29 protein_coding protein_coding MGP_NODShiLtJ_T0097153.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164893493 164954579 - Tmem29 protein_coding processed_transcript MGP_NODShiLtJ_T0097154.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164903226 164954583 - Tmem29 protein_coding processed_transcript MGP_NODShiLtJ_T0097155.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164903226 164936490 - Tmem29 protein_coding processed_transcript MGP_NODShiLtJ_T0097156.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164903232 164936289 - MGP_NODShiLtJ_P0097156 Tmem29 protein_coding protein_coding MGP_NODShiLtJ_T0097157.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164903568 164954583 - Tmem29 protein_coding processed_transcript MGP_NODShiLtJ_T0097158.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164903754 164930861 - Tmem29 protein_coding processed_transcript MGP_NODShiLtJ_T0097159.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164903819 164936289 - Tmem29 protein_coding processed_transcript MGP_NODShiLtJ_T0097160.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164911610 164954583 - Tmem29 protein_coding retained_intron MGP_NODShiLtJ_T0097161.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164932487 164936547 - Tmem29 protein_coding processed_transcript MGP_NODShiLtJ_T0097162.1 MGP_NODShiLtJ_G0035947.1 mouse_genomes_project X 164933292 164936173 - Tmem29 protein_coding processed_transcript MGP_NODShiLtJ_T0016617.1 MGP_NODShiLtJ_G0014725.1 mouse_genomes_project X 149387479 149388529 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096864.1 MGP_NODShiLtJ_G0035857.1 mouse_genomes_project X 147507575 147524459 - Nxf2 protein_coding retained_intron MGP_NODShiLtJ_T0096865.1 MGP_NODShiLtJ_G0035857.1 mouse_genomes_project X 147507577 147535872 - MGP_NODShiLtJ_P0096865 Nxf2 protein_coding protein_coding MGP_NODShiLtJ_T0096866.1 MGP_NODShiLtJ_G0035857.1 mouse_genomes_project X 147507577 147535872 - MGP_NODShiLtJ_P0096866 Nxf2 protein_coding protein_coding MGP_NODShiLtJ_T0096867.1 MGP_NODShiLtJ_G0035857.1 mouse_genomes_project X 147507577 147535014 - MGP_NODShiLtJ_P0096867 Nxf2 protein_coding protein_coding MGP_NODShiLtJ_T0096984.1 MGP_NODShiLtJ_G0035899.1 mouse_genomes_project X 152154368 152290854 + MGP_NODShiLtJ_P0096984 Nrk protein_coding protein_coding MGP_NODShiLtJ_T0096985.1 MGP_NODShiLtJ_G0035899.1 mouse_genomes_project X 152154369 152235672 + Nrk protein_coding processed_transcript MGP_NODShiLtJ_T0096986.1 MGP_NODShiLtJ_G0035899.1 mouse_genomes_project X 152154369 152292294 + MGP_NODShiLtJ_P0096986 Nrk protein_coding protein_coding MGP_NODShiLtJ_T0096987.1 MGP_NODShiLtJ_G0035899.1 mouse_genomes_project X 152154369 152291566 + MGP_NODShiLtJ_P0096987 Nrk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096988.1 MGP_NODShiLtJ_G0035899.1 mouse_genomes_project X 152252617 152259201 + Nrk protein_coding retained_intron MGP_NODShiLtJ_T0016238.1 MGP_NODShiLtJ_G0014346.1 mouse_genomes_project X 60875671 60876731 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016784.1 MGP_NODShiLtJ_G0014892.1 mouse_genomes_project X 185110584 185110979 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096614.1 MGP_NODShiLtJ_G0035774.1 mouse_genomes_project X 112768649 112772199 + MGP_NODShiLtJ_P0096614 Magee1 protein_coding protein_coding MGP_NODShiLtJ_T0096308.1 MGP_NODShiLtJ_G0035690.1 mouse_genomes_project X 100328250 100366000 - MGP_NODShiLtJ_P0096308 Eif2s3x protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096309.1 MGP_NODShiLtJ_G0035690.1 mouse_genomes_project X 100328252 100366076 - MGP_NODShiLtJ_P0096309 Eif2s3x protein_coding protein_coding MGP_NODShiLtJ_T0096310.1 MGP_NODShiLtJ_G0035690.1 mouse_genomes_project X 100341838 100366018 - MGP_NODShiLtJ_P0096310 Eif2s3x protein_coding protein_coding MGP_NODShiLtJ_T0096311.1 MGP_NODShiLtJ_G0035690.1 mouse_genomes_project X 100345080 100366229 - Eif2s3x protein_coding processed_transcript MGP_NODShiLtJ_T0016176.1 MGP_NODShiLtJ_G0014284.1 mouse_genomes_project X 41644473 41645191 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018448.1 MGP_NODShiLtJ_G0015639.1 mouse_genomes_project X 15259784 15269590 - Gm14636 processed_transcript processed_transcript MGP_NODShiLtJ_T0018449.1 MGP_NODShiLtJ_G0015639.1 mouse_genomes_project X 15264411 15269599 - Gm14636 processed_transcript processed_transcript MGP_NODShiLtJ_T0095868.1 MGP_NODShiLtJ_G0035599.1 mouse_genomes_project X 76093726 76097457 - MGP_NODShiLtJ_P0095868 Pnck protein_coding protein_coding MGP_NODShiLtJ_T0095869.1 MGP_NODShiLtJ_G0035599.1 mouse_genomes_project X 76093726 76097561 - MGP_NODShiLtJ_P0095869 Pnck protein_coding protein_coding MGP_NODShiLtJ_T0095870.1 MGP_NODShiLtJ_G0035599.1 mouse_genomes_project X 76093727 76097850 - MGP_NODShiLtJ_P0095870 Pnck protein_coding protein_coding MGP_NODShiLtJ_T0095871.1 MGP_NODShiLtJ_G0035599.1 mouse_genomes_project X 76093983 76095564 - Pnck protein_coding retained_intron MGP_NODShiLtJ_T0095872.1 MGP_NODShiLtJ_G0035599.1 mouse_genomes_project X 76095008 76097166 - MGP_NODShiLtJ_P0095872 Pnck protein_coding protein_coding MGP_NODShiLtJ_T0011118.1 MGP_NODShiLtJ_G0009251.1 mouse_genomes_project X 183565273 183565401 + Gm44376 miRNA miRNA MGP_NODShiLtJ_T0011103.1 MGP_NODShiLtJ_G0009236.1 mouse_genomes_project X 156666864 156666959 - Gm44351 miRNA miRNA MGP_NODShiLtJ_T0016543.1 MGP_NODShiLtJ_G0014651.1 mouse_genomes_project X 125091032 125091423 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016073.1 MGP_NODShiLtJ_G0014181.1 mouse_genomes_project X 2879226 2879397 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016591.1 MGP_NODShiLtJ_G0014699.1 mouse_genomes_project X 142760970 142770846 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016415.1 MGP_NODShiLtJ_G0014523.1 mouse_genomes_project X 102686823 102690725 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099718.1 MGP_NODShiLtJ_G0038112.1 mouse_genomes_project X 172602411 172602575 + Gm22666 snRNA snRNA MGP_NODShiLtJ_T0016252.1 MGP_NODShiLtJ_G0014360.1 mouse_genomes_project X 62686333 62687433 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016749.1 MGP_NODShiLtJ_G0014857.1 mouse_genomes_project X 176250053 176250316 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095614.1 MGP_NODShiLtJ_G0035503.1 mouse_genomes_project X 51189504 51193582 - MGP_NODShiLtJ_P0095614 1700080O16Rik protein_coding protein_coding MGP_NODShiLtJ_T0095615.1 MGP_NODShiLtJ_G0035503.1 mouse_genomes_project X 51189701 51191857 - MGP_NODShiLtJ_P0095615 1700080O16Rik protein_coding protein_coding MGP_NODShiLtJ_T0095348.1 MGP_NODShiLtJ_G0035414.1 mouse_genomes_project X 32681119 32903841 + MGP_NODShiLtJ_P0095348 Dock11 protein_coding protein_coding MGP_NODShiLtJ_T0095349.1 MGP_NODShiLtJ_G0035414.1 mouse_genomes_project X 32741296 32903835 + MGP_NODShiLtJ_P0095349 Dock11 protein_coding protein_coding MGP_NODShiLtJ_T0095350.1 MGP_NODShiLtJ_G0035414.1 mouse_genomes_project X 32776492 32786610 + Dock11 protein_coding retained_intron MGP_NODShiLtJ_T0095351.1 MGP_NODShiLtJ_G0035414.1 mouse_genomes_project X 32859050 32903506 + MGP_NODShiLtJ_P0095351 Dock11 protein_coding protein_coding MGP_NODShiLtJ_T0016333.1 MGP_NODShiLtJ_G0014441.1 mouse_genomes_project X 81865806 81866915 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099673.1 MGP_NODShiLtJ_G0038067.1 mouse_genomes_project X 57870737 57870844 + Gm25023 snRNA snRNA MGP_NODShiLtJ_T0016184.1 MGP_NODShiLtJ_G0014292.1 mouse_genomes_project X 44244395 44244630 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016370.1 MGP_NODShiLtJ_G0014478.1 mouse_genomes_project X 94012246 94013368 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016072.1 MGP_NODShiLtJ_G0014180.1 mouse_genomes_project X 2859144 2871980 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005529.1 MGP_NODShiLtJ_G0004655.1 mouse_genomes_project X 73583973 73615312 + Gm16189 antisense antisense MGP_NODShiLtJ_T0016652.1 MGP_NODShiLtJ_G0014760.1 mouse_genomes_project X 155439844 155440115 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096191.1 MGP_NODShiLtJ_G0035642.1 mouse_genomes_project X 78084958 78099067 + MGP_NODShiLtJ_P0096191 Fundc2 protein_coding protein_coding MGP_NODShiLtJ_T0096192.1 MGP_NODShiLtJ_G0035642.1 mouse_genomes_project X 78084989 78089930 + Fundc2 protein_coding retained_intron MGP_NODShiLtJ_T0096193.1 MGP_NODShiLtJ_G0035642.1 mouse_genomes_project X 78089556 78096997 + Fundc2 protein_coding processed_transcript MGP_NODShiLtJ_T0016099.1 MGP_NODShiLtJ_G0014207.1 mouse_genomes_project X 8285927 8287184 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095539.1 MGP_NODShiLtJ_G0035479.1 mouse_genomes_project X 47209402 47229675 + Bcorl1 protein_coding processed_transcript MGP_NODShiLtJ_T0095540.1 MGP_NODShiLtJ_G0035479.1 mouse_genomes_project X 47211050 47273059 + MGP_NODShiLtJ_P0095540 Bcorl1 protein_coding protein_coding MGP_NODShiLtJ_T0095541.1 MGP_NODShiLtJ_G0035479.1 mouse_genomes_project X 47228788 47246296 + MGP_NODShiLtJ_P0095541 Bcorl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095542.1 MGP_NODShiLtJ_G0035479.1 mouse_genomes_project X 47236503 47251133 + MGP_NODShiLtJ_P0095542 Bcorl1 protein_coding protein_coding MGP_NODShiLtJ_T0016062.1 MGP_NODShiLtJ_G0014170.1 mouse_genomes_project X 727564 728074 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102241.1 MGP_NODShiLtJ_G0040407.1 mouse_genomes_project X 45126518 45127289 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095414.1 MGP_NODShiLtJ_G0035446.1 mouse_genomes_project X 34933666 34940220 + MGP_NODShiLtJ_P0095414 Rhox10 protein_coding protein_coding MGP_NODShiLtJ_T0016122.1 MGP_NODShiLtJ_G0014230.1 mouse_genomes_project X 15944679 15945012 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095405.1 MGP_NODShiLtJ_G0035441.1 mouse_genomes_project X 34674079 34677254 + MGP_NODShiLtJ_P0095405 protein_coding protein_coding MGP_NODShiLtJ_T0095406.1 MGP_NODShiLtJ_G0035441.1 mouse_genomes_project X 34674145 34677254 + MGP_NODShiLtJ_P0095406 protein_coding protein_coding MGP_NODShiLtJ_T0095200.1 MGP_NODShiLtJ_G0035368.1 mouse_genomes_project X 8007002 8098751 - MGP_NODShiLtJ_P0095200 Med14 protein_coding protein_coding MGP_NODShiLtJ_T0095201.1 MGP_NODShiLtJ_G0035368.1 mouse_genomes_project X 8011892 8048958 - MGP_NODShiLtJ_P0095201 Med14 protein_coding protein_coding MGP_NODShiLtJ_T0095202.1 MGP_NODShiLtJ_G0035368.1 mouse_genomes_project X 8012606 8098751 - Med14 protein_coding retained_intron MGP_NODShiLtJ_T0095203.1 MGP_NODShiLtJ_G0035368.1 mouse_genomes_project X 8039232 8046775 - Med14 protein_coding retained_intron MGP_NODShiLtJ_T0095204.1 MGP_NODShiLtJ_G0035368.1 mouse_genomes_project X 8041988 8098751 - MGP_NODShiLtJ_P0095204 Med14 protein_coding protein_coding MGP_NODShiLtJ_T0005524.1 MGP_NODShiLtJ_G0004651.1 mouse_genomes_project X 60699935 60972360 + antisense antisense MGP_NODShiLtJ_T0102268.1 MGP_NODShiLtJ_G0040434.1 mouse_genomes_project X 110101115 110125783 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016465.1 MGP_NODShiLtJ_G0014573.1 mouse_genomes_project X 110977960 110978389 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100935.1 MGP_NODShiLtJ_G0039329.1 mouse_genomes_project X 17911190 17911321 - Gm22592 snoRNA snoRNA MGP_NODShiLtJ_T0096380.1 MGP_NODShiLtJ_G0035709.1 mouse_genomes_project X 103957713 104009412 - MGP_NODShiLtJ_P0096380 Eda2r protein_coding protein_coding MGP_NODShiLtJ_T0096381.1 MGP_NODShiLtJ_G0035709.1 mouse_genomes_project X 103961011 104009346 - MGP_NODShiLtJ_P0096381 Eda2r protein_coding protein_coding MGP_NODShiLtJ_T0096382.1 MGP_NODShiLtJ_G0035709.1 mouse_genomes_project X 103961664 104009412 - Eda2r protein_coding retained_intron MGP_NODShiLtJ_T0096695.1 MGP_NODShiLtJ_G0035795.1 mouse_genomes_project X 116085556 116088258 - MGP_NODShiLtJ_P0096695 Gm732 protein_coding protein_coding MGP_NODShiLtJ_T0096696.1 MGP_NODShiLtJ_G0035795.1 mouse_genomes_project X 116086697 116088287 - MGP_NODShiLtJ_P0096696 Gm732 protein_coding protein_coding MGP_NODShiLtJ_T0016575.1 MGP_NODShiLtJ_G0014683.1 mouse_genomes_project X 132870508 132870804 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016418.1 MGP_NODShiLtJ_G0014526.1 mouse_genomes_project X 103445644 103448009 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016367.1 MGP_NODShiLtJ_G0014475.1 mouse_genomes_project X 93838547 93839018 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016589.1 MGP_NODShiLtJ_G0014697.1 mouse_genomes_project X 142189785 142190573 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011083.1 MGP_NODShiLtJ_G0009216.1 mouse_genomes_project X 107346746 107346835 + Mir676 miRNA miRNA MGP_NODShiLtJ_T0095075.1 MGP_NODShiLtJ_G0035328.1 mouse_genomes_project X 2712445 2712831 + MGP_NODShiLtJ_P0095075 protein_coding protein_coding MGP_NODShiLtJ_T0096801.1 MGP_NODShiLtJ_G0035839.1 mouse_genomes_project X 146613605 146627365 - MGP_NODShiLtJ_P0096801 Xkrx protein_coding protein_coding MGP_NODShiLtJ_T0096802.1 MGP_NODShiLtJ_G0035839.1 mouse_genomes_project X 146615672 146627513 - Xkrx protein_coding processed_transcript MGP_NODShiLtJ_T0016417.1 MGP_NODShiLtJ_G0014525.1 mouse_genomes_project X 103097193 103098901 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011030.1 MGP_NODShiLtJ_G0009163.1 mouse_genomes_project X 51992255 51992346 - Mir92-2 miRNA miRNA MGP_NODShiLtJ_T0097460.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179116634 179205539 + MGP_NODShiLtJ_P0097460 Ctps2 protein_coding protein_coding MGP_NODShiLtJ_T0097461.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179116641 179136875 + Ctps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097462.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179116641 179136550 + Ctps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097463.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179117001 179259834 + MGP_NODShiLtJ_P0097463 Ctps2 protein_coding protein_coding MGP_NODShiLtJ_T0097464.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179117028 179260017 + MGP_NODShiLtJ_P0097464 Ctps2 protein_coding protein_coding MGP_NODShiLtJ_T0097465.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179117165 179260010 + MGP_NODShiLtJ_P0097465 Ctps2 protein_coding protein_coding MGP_NODShiLtJ_T0097466.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179117181 179118967 + Ctps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097467.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179117266 179259834 + MGP_NODShiLtJ_P0097467 Ctps2 protein_coding protein_coding MGP_NODShiLtJ_T0097468.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179117567 179137746 + Ctps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097469.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179145036 179152806 + Ctps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097470.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179157246 179202204 + Ctps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097471.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179157627 179157917 + Ctps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097472.1 MGP_NODShiLtJ_G0036016.1 mouse_genomes_project X 179157733 179262058 + MGP_NODShiLtJ_P0097472 Ctps2 protein_coding protein_coding MGP_NODShiLtJ_T0095742.1 MGP_NODShiLtJ_G0035558.1 mouse_genomes_project X 70336611 70338404 + MGP_NODShiLtJ_P0095742 protein_coding protein_coding MGP_NODShiLtJ_T0016243.1 MGP_NODShiLtJ_G0014351.1 mouse_genomes_project X 61660288 61660845 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016246.1 MGP_NODShiLtJ_G0014354.1 mouse_genomes_project X 61916415 61916993 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096480.1 MGP_NODShiLtJ_G0035735.1 mouse_genomes_project X 108336435 108340286 - MGP_NODShiLtJ_P0096480 Il2rg protein_coding protein_coding MGP_NODShiLtJ_T0096481.1 MGP_NODShiLtJ_G0035735.1 mouse_genomes_project X 108336995 108339465 - MGP_NODShiLtJ_P0096481 Il2rg protein_coding protein_coding MGP_NODShiLtJ_T0096482.1 MGP_NODShiLtJ_G0035735.1 mouse_genomes_project X 108338696 108340221 - Il2rg protein_coding retained_intron MGP_NODShiLtJ_T0096483.1 MGP_NODShiLtJ_G0035735.1 mouse_genomes_project X 108339226 108340189 - Il2rg protein_coding processed_transcript MGP_NODShiLtJ_T0016533.1 MGP_NODShiLtJ_G0014641.1 mouse_genomes_project X 123329711 123330450 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011645.1 MGP_NODShiLtJ_G0009778.1 mouse_genomes_project X 49044599 49044894 + Gm23385 misc_RNA misc_RNA MGP_NODShiLtJ_T0016256.1 MGP_NODShiLtJ_G0014364.1 mouse_genomes_project X 63420735 63420957 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016291.1 MGP_NODShiLtJ_G0014399.1 mouse_genomes_project X 73069060 73069691 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095066.1 MGP_NODShiLtJ_G0035325.1 mouse_genomes_project X 2695325 2700083 - MGP_NODShiLtJ_P0095066 Pqbp1 protein_coding protein_coding MGP_NODShiLtJ_T0095067.1 MGP_NODShiLtJ_G0035325.1 mouse_genomes_project X 2695389 2699793 - MGP_NODShiLtJ_P0095067 Pqbp1 protein_coding protein_coding MGP_NODShiLtJ_T0095068.1 MGP_NODShiLtJ_G0035325.1 mouse_genomes_project X 2695517 2700013 - MGP_NODShiLtJ_P0095068 Pqbp1 protein_coding protein_coding MGP_NODShiLtJ_T0095069.1 MGP_NODShiLtJ_G0035325.1 mouse_genomes_project X 2695600 2699814 - MGP_NODShiLtJ_P0095069 Pqbp1 protein_coding protein_coding MGP_NODShiLtJ_T0095070.1 MGP_NODShiLtJ_G0035325.1 mouse_genomes_project X 2696700 2699710 - MGP_NODShiLtJ_P0095070 Pqbp1 protein_coding protein_coding MGP_NODShiLtJ_T0016601.1 MGP_NODShiLtJ_G0014709.1 mouse_genomes_project X 145779432 145780168 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016492.1 MGP_NODShiLtJ_G0014600.1 mouse_genomes_project X 114461952 114462825 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096901.1 MGP_NODShiLtJ_G0035871.1 mouse_genomes_project X 148643953 148649181 + MGP_NODShiLtJ_P0096901 Bhlhb9 protein_coding protein_coding MGP_NODShiLtJ_T0096902.1 MGP_NODShiLtJ_G0035871.1 mouse_genomes_project X 148643955 148649184 + MGP_NODShiLtJ_P0096902 Bhlhb9 protein_coding protein_coding MGP_NODShiLtJ_T0096903.1 MGP_NODShiLtJ_G0035871.1 mouse_genomes_project X 148643955 148647429 + MGP_NODShiLtJ_P0096903 Bhlhb9 protein_coding protein_coding MGP_NODShiLtJ_T0096904.1 MGP_NODShiLtJ_G0035871.1 mouse_genomes_project X 148644085 148645573 + Bhlhb9 protein_coding retained_intron MGP_NODShiLtJ_T0096735.1 MGP_NODShiLtJ_G0035813.1 mouse_genomes_project X 121984618 122187430 - MGP_NODShiLtJ_P0096735 Chm protein_coding protein_coding MGP_NODShiLtJ_T0096736.1 MGP_NODShiLtJ_G0035813.1 mouse_genomes_project X 121987406 121991816 - Chm protein_coding processed_transcript MGP_NODShiLtJ_T0096737.1 MGP_NODShiLtJ_G0035813.1 mouse_genomes_project X 122010051 122142030 - Chm protein_coding processed_transcript MGP_NODShiLtJ_T0096738.1 MGP_NODShiLtJ_G0035813.1 mouse_genomes_project X 122067366 122142030 - Chm protein_coding processed_transcript MGP_NODShiLtJ_T0096690.1 MGP_NODShiLtJ_G0035792.1 mouse_genomes_project X 115734300 115746380 + MGP_NODShiLtJ_P0096690 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096691.1 MGP_NODShiLtJ_G0035792.1 mouse_genomes_project X 115744221 115758587 + MGP_NODShiLtJ_P0096691 protein_coding protein_coding MGP_NODShiLtJ_T0011073.1 MGP_NODShiLtJ_G0009206.1 mouse_genomes_project X 76513108 76513179 - Mir5132 miRNA miRNA MGP_NODShiLtJ_T0098139.1 MGP_NODShiLtJ_G0036551.1 mouse_genomes_project X 175338552 175338661 + Gm23806 rRNA rRNA MGP_NODShiLtJ_T0096783.1 MGP_NODShiLtJ_G0035835.1 mouse_genomes_project X 146352477 146375636 + MGP_NODShiLtJ_P0096783 Srpx2 protein_coding protein_coding MGP_NODShiLtJ_T0016277.1 MGP_NODShiLtJ_G0014385.1 mouse_genomes_project X 70174866 70175872 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096773.1 MGP_NODShiLtJ_G0035832.1 mouse_genomes_project X 145988001 146107653 - MGP_NODShiLtJ_P0096773 Pcdh19 protein_coding protein_coding MGP_NODShiLtJ_T0096774.1 MGP_NODShiLtJ_G0035832.1 mouse_genomes_project X 145988016 146105930 - MGP_NODShiLtJ_P0096774 Pcdh19 protein_coding protein_coding MGP_NODShiLtJ_T0096775.1 MGP_NODShiLtJ_G0035832.1 mouse_genomes_project X 145988020 146104559 - MGP_NODShiLtJ_P0096775 Pcdh19 protein_coding protein_coding MGP_NODShiLtJ_T0096776.1 MGP_NODShiLtJ_G0035832.1 mouse_genomes_project X 145988021 145993153 - MGP_NODShiLtJ_P0096776 Pcdh19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096777.1 MGP_NODShiLtJ_G0035832.1 mouse_genomes_project X 146100013 146103657 - Pcdh19 protein_coding processed_transcript MGP_NODShiLtJ_T0096924.1 MGP_NODShiLtJ_G0035881.1 mouse_genomes_project X 149438261 149513471 + MGP_NODShiLtJ_P0096924 protein_coding protein_coding MGP_NODShiLtJ_T0096925.1 MGP_NODShiLtJ_G0035881.1 mouse_genomes_project X 149438263 149513327 + MGP_NODShiLtJ_P0096925 protein_coding protein_coding MGP_NODShiLtJ_T0096926.1 MGP_NODShiLtJ_G0035881.1 mouse_genomes_project X 149438267 149497148 + protein_coding processed_transcript MGP_NODShiLtJ_T0096927.1 MGP_NODShiLtJ_G0035881.1 mouse_genomes_project X 149438274 149497711 + protein_coding processed_transcript MGP_NODShiLtJ_T0096928.1 MGP_NODShiLtJ_G0035881.1 mouse_genomes_project X 149512151 149517734 + MGP_NODShiLtJ_P0096928 protein_coding protein_coding MGP_NODShiLtJ_T0096931.1 MGP_NODShiLtJ_G0035881.1 mouse_genomes_project X 149512179 149517730 + MGP_NODShiLtJ_P0096931 protein_coding protein_coding MGP_NODShiLtJ_T0096932.1 MGP_NODShiLtJ_G0035881.1 mouse_genomes_project X 149512387 149513751 + MGP_NODShiLtJ_P0096932 protein_coding protein_coding MGP_NODShiLtJ_T0005553.1 MGP_NODShiLtJ_G0004673.1 mouse_genomes_project X 176520017 176526156 - Gm15243 antisense antisense MGP_NODShiLtJ_T0016778.1 MGP_NODShiLtJ_G0014886.1 mouse_genomes_project X 183542715 183543162 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016567.1 MGP_NODShiLtJ_G0014675.1 mouse_genomes_project X 130753019 130753671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100970.1 MGP_NODShiLtJ_G0039364.1 mouse_genomes_project X 142646401 142646530 - Gm25170 snoRNA snoRNA MGP_NODShiLtJ_T0011662.1 MGP_NODShiLtJ_G0009795.1 mouse_genomes_project X 138511351 138511626 + Gm22636 misc_RNA misc_RNA MGP_NODShiLtJ_T0095131.1 MGP_NODShiLtJ_G0035341.1 mouse_genomes_project X 3088745 3107236 - MGP_NODShiLtJ_P0095131 Ftsj1 protein_coding protein_coding MGP_NODShiLtJ_T0095132.1 MGP_NODShiLtJ_G0035341.1 mouse_genomes_project X 3090499 3107140 - MGP_NODShiLtJ_P0095132 Ftsj1 protein_coding protein_coding MGP_NODShiLtJ_T0095133.1 MGP_NODShiLtJ_G0035341.1 mouse_genomes_project X 3090499 3107225 - MGP_NODShiLtJ_P0095133 Ftsj1 protein_coding protein_coding MGP_NODShiLtJ_T0095134.1 MGP_NODShiLtJ_G0035341.1 mouse_genomes_project X 3099370 3107038 - Ftsj1 protein_coding retained_intron MGP_NODShiLtJ_T0095135.1 MGP_NODShiLtJ_G0035341.1 mouse_genomes_project X 3099664 3101065 - MGP_NODShiLtJ_P0095135 Ftsj1 protein_coding protein_coding MGP_NODShiLtJ_T0095136.1 MGP_NODShiLtJ_G0035341.1 mouse_genomes_project X 3099695 3100555 - Ftsj1 protein_coding processed_transcript MGP_NODShiLtJ_T0095137.1 MGP_NODShiLtJ_G0035341.1 mouse_genomes_project X 3103230 3107193 - Ftsj1 protein_coding retained_intron MGP_NODShiLtJ_T0016735.1 MGP_NODShiLtJ_G0014843.1 mouse_genomes_project X 173305749 173305970 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097592.1 MGP_NODShiLtJ_G0036051.1 mouse_genomes_project X 185982599 185993875 - MGP_NODShiLtJ_P0097592 Amelx protein_coding protein_coding MGP_NODShiLtJ_T0097593.1 MGP_NODShiLtJ_G0036051.1 mouse_genomes_project X 185986848 185993875 - MGP_NODShiLtJ_P0097593 Amelx protein_coding protein_coding MGP_NODShiLtJ_T0097594.1 MGP_NODShiLtJ_G0036051.1 mouse_genomes_project X 185986848 185993875 - MGP_NODShiLtJ_P0097594 Amelx protein_coding protein_coding MGP_NODShiLtJ_T0099656.1 MGP_NODShiLtJ_G0038050.1 mouse_genomes_project X 15468984 15469091 + Gm22783 snRNA snRNA MGP_NODShiLtJ_T0016112.1 MGP_NODShiLtJ_G0014220.1 mouse_genomes_project X 12130832 12131084 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016680.1 MGP_NODShiLtJ_G0014788.1 mouse_genomes_project X 159879904 159880722 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095600.1 MGP_NODShiLtJ_G0035500.1 mouse_genomes_project X 50235608 50346344 - MGP_NODShiLtJ_P0095600 Mbnl3 protein_coding protein_coding MGP_NODShiLtJ_T0095601.1 MGP_NODShiLtJ_G0035500.1 mouse_genomes_project X 50238421 50346502 - MGP_NODShiLtJ_P0095601 Mbnl3 protein_coding protein_coding MGP_NODShiLtJ_T0095602.1 MGP_NODShiLtJ_G0035500.1 mouse_genomes_project X 50238421 50277072 - MGP_NODShiLtJ_P0095602 Mbnl3 protein_coding protein_coding MGP_NODShiLtJ_T0095603.1 MGP_NODShiLtJ_G0035500.1 mouse_genomes_project X 50238793 50247778 - Mbnl3 protein_coding retained_intron MGP_NODShiLtJ_T0095604.1 MGP_NODShiLtJ_G0035500.1 mouse_genomes_project X 50238830 50295854 - MGP_NODShiLtJ_P0095604 Mbnl3 protein_coding protein_coding MGP_NODShiLtJ_T0095605.1 MGP_NODShiLtJ_G0035500.1 mouse_genomes_project X 50239226 50268711 - Mbnl3 protein_coding processed_transcript MGP_NODShiLtJ_T0095606.1 MGP_NODShiLtJ_G0035500.1 mouse_genomes_project X 50295596 50347044 - Mbnl3 protein_coding processed_transcript MGP_NODShiLtJ_T0095231.1 MGP_NODShiLtJ_G0035374.1 mouse_genomes_project X 9086816 9094193 + MGP_NODShiLtJ_P0095231 Gpr82 protein_coding protein_coding MGP_NODShiLtJ_T0016340.1 MGP_NODShiLtJ_G0014448.1 mouse_genomes_project X 84092280 84092505 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016270.1 MGP_NODShiLtJ_G0014378.1 mouse_genomes_project X 68340960 68341480 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016155.1 MGP_NODShiLtJ_G0014263.1 mouse_genomes_project X 36185453 36185774 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016242.1 MGP_NODShiLtJ_G0014350.1 mouse_genomes_project X 61317945 61319098 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016430.1 MGP_NODShiLtJ_G0014538.1 mouse_genomes_project X 106709074 106710267 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009363.1 MGP_NODShiLtJ_G0007498.1 mouse_genomes_project X 183674870 183682035 - Gm8817 lincRNA lincRNA MGP_NODShiLtJ_T0009364.1 MGP_NODShiLtJ_G0007498.1 mouse_genomes_project X 183675012 183682035 - Gm8817 lincRNA lincRNA MGP_NODShiLtJ_T0009365.1 MGP_NODShiLtJ_G0007498.1 mouse_genomes_project X 183675228 183680044 - Gm8817 lincRNA lincRNA MGP_NODShiLtJ_T0016377.1 MGP_NODShiLtJ_G0014485.1 mouse_genomes_project X 95224623 95229458 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016316.1 MGP_NODShiLtJ_G0014424.1 mouse_genomes_project X 79512202 79512919 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016269.1 MGP_NODShiLtJ_G0014377.1 mouse_genomes_project X 68340957 68341481 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016460.1 MGP_NODShiLtJ_G0014568.1 mouse_genomes_project X 110757251 110757706 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016225.1 MGP_NODShiLtJ_G0014333.1 mouse_genomes_project X 58154058 58154738 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095905.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76241396 76245132 + MGP_NODShiLtJ_P0095905 Ssr4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095906.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76241401 76245198 + MGP_NODShiLtJ_P0095906 Ssr4 protein_coding protein_coding MGP_NODShiLtJ_T0095907.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76241435 76245200 + MGP_NODShiLtJ_P0095907 Ssr4 protein_coding protein_coding MGP_NODShiLtJ_T0095908.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76241555 76243466 + Ssr4 protein_coding retained_intron MGP_NODShiLtJ_T0095909.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76241557 76244706 + Ssr4 protein_coding retained_intron MGP_NODShiLtJ_T0095910.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76241557 76245200 + Ssr4 protein_coding retained_intron MGP_NODShiLtJ_T0095911.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76241597 76245185 + Ssr4 protein_coding retained_intron MGP_NODShiLtJ_T0095912.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76241638 76244537 + Ssr4 protein_coding retained_intron MGP_NODShiLtJ_T0095913.1 MGP_NODShiLtJ_G0035606.1 mouse_genomes_project X 76243217 76245204 + Ssr4 protein_coding retained_intron MGP_NODShiLtJ_T0011038.1 MGP_NODShiLtJ_G0009171.1 mouse_genomes_project X 52363718 52363803 - Mir542 miRNA miRNA MGP_NODShiLtJ_T0095964.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76395472 76405764 - MGP_NODShiLtJ_P0095964 Renbp protein_coding protein_coding MGP_NODShiLtJ_T0095965.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76395472 76405706 - MGP_NODShiLtJ_P0095965 Renbp protein_coding protein_coding MGP_NODShiLtJ_T0095966.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76395473 76400436 - Renbp protein_coding retained_intron MGP_NODShiLtJ_T0095967.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76395474 76405731 - Renbp protein_coding retained_intron MGP_NODShiLtJ_T0095968.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76395490 76405670 - MGP_NODShiLtJ_P0095968 Renbp protein_coding protein_coding MGP_NODShiLtJ_T0095969.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76399297 76404043 - Renbp protein_coding processed_transcript MGP_NODShiLtJ_T0095970.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76400301 76402244 - Renbp protein_coding retained_intron MGP_NODShiLtJ_T0095971.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76402402 76405655 - Renbp protein_coding retained_intron MGP_NODShiLtJ_T0095972.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76404055 76405659 - MGP_NODShiLtJ_P0095972 Renbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095973.1 MGP_NODShiLtJ_G0035612.1 mouse_genomes_project X 76404502 76405666 - Renbp protein_coding retained_intron MGP_NODShiLtJ_T0016180.1 MGP_NODShiLtJ_G0014288.1 mouse_genomes_project X 42701479 42701819 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016733.1 MGP_NODShiLtJ_G0014841.1 mouse_genomes_project X 173288466 173289062 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016198.1 MGP_NODShiLtJ_G0014306.1 mouse_genomes_project X 49583450 49583833 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016221.1 MGP_NODShiLtJ_G0014329.1 mouse_genomes_project X 57598927 57600935 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095704.1 MGP_NODShiLtJ_G0035539.1 mouse_genomes_project X 58874896 58887073 + MGP_NODShiLtJ_P0095704 4930550L24Rik protein_coding protein_coding MGP_NODShiLtJ_T0095705.1 MGP_NODShiLtJ_G0035539.1 mouse_genomes_project X 58876999 58887073 + MGP_NODShiLtJ_P0095705 4930550L24Rik protein_coding protein_coding MGP_NODShiLtJ_T0016538.1 MGP_NODShiLtJ_G0014646.1 mouse_genomes_project X 124310625 124311084 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095930.1 MGP_NODShiLtJ_G0035610.1 mouse_genomes_project X 76364232 76366559 + MGP_NODShiLtJ_P0095930 Avpr2 protein_coding protein_coding MGP_NODShiLtJ_T0095931.1 MGP_NODShiLtJ_G0035610.1 mouse_genomes_project X 76364233 76365552 + Avpr2 protein_coding processed_transcript MGP_NODShiLtJ_T0095932.1 MGP_NODShiLtJ_G0035610.1 mouse_genomes_project X 76364240 76367633 + MGP_NODShiLtJ_P0095932 Avpr2 protein_coding protein_coding MGP_NODShiLtJ_T0095933.1 MGP_NODShiLtJ_G0035610.1 mouse_genomes_project X 76364244 76366328 + MGP_NODShiLtJ_P0095933 Avpr2 protein_coding protein_coding MGP_NODShiLtJ_T0096335.1 MGP_NODShiLtJ_G0035696.1 mouse_genomes_project X 101005070 101012170 + MGP_NODShiLtJ_P0096335 Zxdb protein_coding protein_coding MGP_NODShiLtJ_T0016517.1 MGP_NODShiLtJ_G0014625.1 mouse_genomes_project X 120839797 120840530 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016075.1 MGP_NODShiLtJ_G0014183.1 mouse_genomes_project X 3847843 3849340 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102257.1 MGP_NODShiLtJ_G0040423.1 mouse_genomes_project X 90876853 90877885 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016348.1 MGP_NODShiLtJ_G0014456.1 mouse_genomes_project X 88092377 88092809 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009315.1 MGP_NODShiLtJ_G0007470.1 mouse_genomes_project X 96838041 96838665 + Gm14773 lincRNA lincRNA MGP_NODShiLtJ_T0099700.1 MGP_NODShiLtJ_G0038094.1 mouse_genomes_project X 122317652 122317778 - Gm24831 snRNA snRNA MGP_NODShiLtJ_T0094998.1 MGP_NODShiLtJ_G0035314.1 mouse_genomes_project X 2444272 2453307 - Magix protein_coding processed_transcript MGP_NODShiLtJ_T0094999.1 MGP_NODShiLtJ_G0035314.1 mouse_genomes_project X 2445734 2453145 - MGP_NODShiLtJ_P0094999 Magix protein_coding protein_coding MGP_NODShiLtJ_T0096161.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77769617 77786892 + MGP_NODShiLtJ_P0096161 protein_coding protein_coding MGP_NODShiLtJ_T0096162.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77769816 77776304 + MGP_NODShiLtJ_P0096162 protein_coding protein_coding MGP_NODShiLtJ_T0096163.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77769849 77772651 + MGP_NODShiLtJ_P0096163 protein_coding protein_coding MGP_NODShiLtJ_T0096164.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77769862 77772561 + protein_coding retained_intron MGP_NODShiLtJ_T0096165.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77769864 77772711 + protein_coding processed_transcript MGP_NODShiLtJ_T0096166.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77769878 77776226 + MGP_NODShiLtJ_P0096166 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096167.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77770309 77772583 + protein_coding retained_intron MGP_NODShiLtJ_T0096168.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77773681 77784351 + protein_coding retained_intron MGP_NODShiLtJ_T0096169.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77773816 77785383 + MGP_NODShiLtJ_P0096169 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096170.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77774022 77782858 + protein_coding processed_transcript MGP_NODShiLtJ_T0096171.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77774694 77782906 + protein_coding processed_transcript MGP_NODShiLtJ_T0096172.1 MGP_NODShiLtJ_G0035638.1 mouse_genomes_project X 77783088 77785416 + protein_coding retained_intron MGP_NODShiLtJ_T0016160.1 MGP_NODShiLtJ_G0014268.1 mouse_genomes_project X 37138759 37139430 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016363.1 MGP_NODShiLtJ_G0014471.1 mouse_genomes_project X 92744280 92745291 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097303.1 MGP_NODShiLtJ_G0035970.1 mouse_genomes_project X 167873414 167876362 + MGP_NODShiLtJ_P0097303 Usp51 protein_coding protein_coding MGP_NODShiLtJ_T0095818.1 MGP_NODShiLtJ_G0035576.1 mouse_genomes_project X 74212240 74229411 + MGP_NODShiLtJ_P0095818 Fate1 protein_coding protein_coding MGP_NODShiLtJ_T0095819.1 MGP_NODShiLtJ_G0035576.1 mouse_genomes_project X 74221942 74229411 + MGP_NODShiLtJ_P0095819 Fate1 protein_coding protein_coding MGP_NODShiLtJ_T0095820.1 MGP_NODShiLtJ_G0035576.1 mouse_genomes_project X 74223569 74229133 + Fate1 protein_coding processed_transcript MGP_NODShiLtJ_T0096611.1 MGP_NODShiLtJ_G0035773.1 mouse_genomes_project X 112727400 112732831 + MGP_NODShiLtJ_P0096611 Pbdc1 protein_coding protein_coding MGP_NODShiLtJ_T0096612.1 MGP_NODShiLtJ_G0035773.1 mouse_genomes_project X 112727405 112765362 + MGP_NODShiLtJ_P0096612 Pbdc1 protein_coding protein_coding MGP_NODShiLtJ_T0096613.1 MGP_NODShiLtJ_G0035773.1 mouse_genomes_project X 112727419 112730805 + Pbdc1 protein_coding retained_intron MGP_NODShiLtJ_T0005534.1 MGP_NODShiLtJ_G0004660.1 mouse_genomes_project X 90114240 90120358 + Gm14764 antisense antisense MGP_NODShiLtJ_T0100954.1 MGP_NODShiLtJ_G0039348.1 mouse_genomes_project X 81594802 81594936 - Gm22843 snoRNA snoRNA MGP_NODShiLtJ_T0096750.1 MGP_NODShiLtJ_G0035819.1 mouse_genomes_project X 126022945 126062234 + MGP_NODShiLtJ_P0096750 Cpxcr1 protein_coding protein_coding MGP_NODShiLtJ_T0016317.1 MGP_NODShiLtJ_G0014425.1 mouse_genomes_project X 79617345 79618034 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100983.1 MGP_NODShiLtJ_G0039377.1 mouse_genomes_project X 172892432 172892564 - Gm25795 snoRNA snoRNA MGP_NODShiLtJ_T0016124.1 MGP_NODShiLtJ_G0014232.1 mouse_genomes_project X 16075583 16076046 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095357.1 MGP_NODShiLtJ_G0035417.1 mouse_genomes_project X 33177524 33191690 + Lonrf3 protein_coding retained_intron MGP_NODShiLtJ_T0095358.1 MGP_NODShiLtJ_G0035417.1 mouse_genomes_project X 33177524 33213380 + MGP_NODShiLtJ_P0095358 Lonrf3 protein_coding protein_coding MGP_NODShiLtJ_T0095359.1 MGP_NODShiLtJ_G0035417.1 mouse_genomes_project X 33178387 33190833 + MGP_NODShiLtJ_P0095359 Lonrf3 protein_coding protein_coding MGP_NODShiLtJ_T0101240.1 MGP_NODShiLtJ_G0039531.1 mouse_genomes_project X 149653858 149654180 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0096304.1 MGP_NODShiLtJ_G0035689.1 mouse_genomes_project X 100216574 100258272 - MGP_NODShiLtJ_P0096304 protein_coding protein_coding MGP_NODShiLtJ_T0096305.1 MGP_NODShiLtJ_G0035689.1 mouse_genomes_project X 100232559 100258006 - MGP_NODShiLtJ_P0096305 protein_coding protein_coding MGP_NODShiLtJ_T0096306.1 MGP_NODShiLtJ_G0035689.1 mouse_genomes_project X 100233057 100258624 - protein_coding processed_transcript MGP_NODShiLtJ_T0096307.1 MGP_NODShiLtJ_G0035689.1 mouse_genomes_project X 100248933 100258029 - protein_coding retained_intron MGP_NODShiLtJ_T0002433.1 MGP_NODShiLtJ_G0002342.1 mouse_genomes_project X 139678968 139680033 + TEC TEC MGP_NODShiLtJ_T0096452.1 MGP_NODShiLtJ_G0035728.1 mouse_genomes_project X 107769504 107827319 + MGP_NODShiLtJ_P0096452 Dlg3 protein_coding protein_coding MGP_NODShiLtJ_T0096453.1 MGP_NODShiLtJ_G0035728.1 mouse_genomes_project X 107769505 107827321 + MGP_NODShiLtJ_P0096453 Dlg3 protein_coding protein_coding MGP_NODShiLtJ_T0096454.1 MGP_NODShiLtJ_G0035728.1 mouse_genomes_project X 107769531 107827321 + MGP_NODShiLtJ_P0096454 Dlg3 protein_coding protein_coding MGP_NODShiLtJ_T0096455.1 MGP_NODShiLtJ_G0035728.1 mouse_genomes_project X 107769777 107827323 + Dlg3 protein_coding retained_intron MGP_NODShiLtJ_T0096456.1 MGP_NODShiLtJ_G0035728.1 mouse_genomes_project X 107776692 107827321 + MGP_NODShiLtJ_P0096456 Dlg3 protein_coding protein_coding MGP_NODShiLtJ_T0096457.1 MGP_NODShiLtJ_G0035728.1 mouse_genomes_project X 107781112 107827321 + Dlg3 protein_coding processed_transcript MGP_NODShiLtJ_T0096458.1 MGP_NODShiLtJ_G0035728.1 mouse_genomes_project X 107803881 107815526 + Dlg3 protein_coding processed_transcript MGP_NODShiLtJ_T0096459.1 MGP_NODShiLtJ_G0035728.1 mouse_genomes_project X 107816912 107823743 + Dlg3 protein_coding processed_transcript MGP_NODShiLtJ_T0095640.1 MGP_NODShiLtJ_G0035518.1 mouse_genomes_project X 53111720 53125390 + MGP_NODShiLtJ_P0095640 4930502E18Rik protein_coding protein_coding MGP_NODShiLtJ_T0011648.1 MGP_NODShiLtJ_G0009781.1 mouse_genomes_project X 70387106 70387162 + Gm27979 misc_RNA misc_RNA MGP_NODShiLtJ_T0011107.1 MGP_NODShiLtJ_G0009240.1 mouse_genomes_project X 161358375 161358483 + Mir764 miRNA miRNA MGP_NODShiLtJ_T0096223.1 MGP_NODShiLtJ_G0035655.1 mouse_genomes_project X 80699781 80739835 - MGP_NODShiLtJ_P0096223 Prkx protein_coding protein_coding MGP_NODShiLtJ_T0096224.1 MGP_NODShiLtJ_G0035655.1 mouse_genomes_project X 80711161 80737727 - MGP_NODShiLtJ_P0096224 Prkx protein_coding protein_coding MGP_NODShiLtJ_T0097039.1 MGP_NODShiLtJ_G0035914.1 mouse_genomes_project X 153498579 153549472 + MGP_NODShiLtJ_P0097039 Pih1h3b protein_coding protein_coding MGP_NODShiLtJ_T0101234.1 MGP_NODShiLtJ_G0039527.1 mouse_genomes_project X 112588311 112588877 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101235.1 MGP_NODShiLtJ_G0039527.1 mouse_genomes_project X 112588332 112588827 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0016489.1 MGP_NODShiLtJ_G0014597.1 mouse_genomes_project X 113411066 113411453 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011009.1 MGP_NODShiLtJ_G0009142.1 mouse_genomes_project X 1980910 1981006 - Mir532 miRNA miRNA MGP_NODShiLtJ_T0095856.1 MGP_NODShiLtJ_G0035596.1 mouse_genomes_project X 75910249 75919848 + Bgn protein_coding processed_transcript MGP_NODShiLtJ_T0095857.1 MGP_NODShiLtJ_G0035596.1 mouse_genomes_project X 75910249 75922790 + MGP_NODShiLtJ_P0095857 Bgn protein_coding protein_coding MGP_NODShiLtJ_T0095858.1 MGP_NODShiLtJ_G0035596.1 mouse_genomes_project X 75910270 75919500 + Bgn protein_coding retained_intron MGP_NODShiLtJ_T0095859.1 MGP_NODShiLtJ_G0035596.1 mouse_genomes_project X 75910280 75912945 + Bgn protein_coding retained_intron MGP_NODShiLtJ_T0095860.1 MGP_NODShiLtJ_G0035596.1 mouse_genomes_project X 75910282 75922786 + MGP_NODShiLtJ_P0095860 Bgn protein_coding protein_coding MGP_NODShiLtJ_T0095861.1 MGP_NODShiLtJ_G0035596.1 mouse_genomes_project X 75910286 75919484 + Bgn protein_coding retained_intron MGP_NODShiLtJ_T0095862.1 MGP_NODShiLtJ_G0035596.1 mouse_genomes_project X 75919158 75920412 + Bgn protein_coding processed_transcript MGP_NODShiLtJ_T0095863.1 MGP_NODShiLtJ_G0035596.1 mouse_genomes_project X 75921758 75922783 + Bgn protein_coding processed_transcript MGP_NODShiLtJ_T0016640.1 MGP_NODShiLtJ_G0014748.1 mouse_genomes_project X 153526387 153527368 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016572.1 MGP_NODShiLtJ_G0014680.1 mouse_genomes_project X 132470497 132471615 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016059.1 MGP_NODShiLtJ_G0014167.1 mouse_genomes_project X 505318 507139 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097599.1 MGP_NODShiLtJ_G0036053.1 mouse_genomes_project X 186680728 186684495 - MGP_NODShiLtJ_P0097599 4933400A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0097600.1 MGP_NODShiLtJ_G0036053.1 mouse_genomes_project X 186680849 186684538 - MGP_NODShiLtJ_P0097600 4933400A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0097601.1 MGP_NODShiLtJ_G0036053.1 mouse_genomes_project X 186680896 186684460 - MGP_NODShiLtJ_P0097601 4933400A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0099689.1 MGP_NODShiLtJ_G0038083.1 mouse_genomes_project X 108314436 108314570 + Gm22472 snRNA snRNA MGP_NODShiLtJ_T0096263.1 MGP_NODShiLtJ_G0035671.1 mouse_genomes_project X 90069380 90148766 - MGP_NODShiLtJ_P0096263 Gk protein_coding protein_coding MGP_NODShiLtJ_T0096264.1 MGP_NODShiLtJ_G0035671.1 mouse_genomes_project X 90069380 90148753 - MGP_NODShiLtJ_P0096264 Gk protein_coding protein_coding MGP_NODShiLtJ_T0096265.1 MGP_NODShiLtJ_G0035671.1 mouse_genomes_project X 90069380 90148948 - MGP_NODShiLtJ_P0096265 Gk protein_coding protein_coding MGP_NODShiLtJ_T0096266.1 MGP_NODShiLtJ_G0035671.1 mouse_genomes_project X 90069380 90148782 - MGP_NODShiLtJ_P0096266 Gk protein_coding protein_coding MGP_NODShiLtJ_T0096267.1 MGP_NODShiLtJ_G0035671.1 mouse_genomes_project X 90074766 90080609 - Gk protein_coding processed_transcript MGP_NODShiLtJ_T0096268.1 MGP_NODShiLtJ_G0035671.1 mouse_genomes_project X 90080528 90082592 - Gk protein_coding retained_intron MGP_NODShiLtJ_T0096269.1 MGP_NODShiLtJ_G0035671.1 mouse_genomes_project X 90080825 90107503 - Gk protein_coding retained_intron MGP_NODShiLtJ_T0096270.1 MGP_NODShiLtJ_G0035671.1 mouse_genomes_project X 90129395 90134069 - Gk protein_coding retained_intron MGP_NODShiLtJ_T0099708.1 MGP_NODShiLtJ_G0038102.1 mouse_genomes_project X 151529593 151529698 - Gm23958 snRNA snRNA MGP_NODShiLtJ_T0097854.1 MGP_NODShiLtJ_G0036266.1 mouse_genomes_project X 50359392 50360499 - pseudogene pseudogene MGP_NODShiLtJ_T0009306.1 MGP_NODShiLtJ_G0007463.1 mouse_genomes_project X 63004644 63032486 - lincRNA lincRNA MGP_NODShiLtJ_T0009307.1 MGP_NODShiLtJ_G0007463.1 mouse_genomes_project X 63004644 63010030 - lincRNA lincRNA MGP_NODShiLtJ_T0097305.1 MGP_NODShiLtJ_G0035972.1 mouse_genomes_project X 168038994 168053048 + MGP_NODShiLtJ_P0097305 Foxr2 protein_coding protein_coding MGP_NODShiLtJ_T0097306.1 MGP_NODShiLtJ_G0035972.1 mouse_genomes_project X 168047101 168053048 + MGP_NODShiLtJ_P0097306 Foxr2 protein_coding protein_coding MGP_NODShiLtJ_T0016127.1 MGP_NODShiLtJ_G0014235.1 mouse_genomes_project X 16645876 16646669 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094967.1 MGP_NODShiLtJ_G0035307.1 mouse_genomes_project X 2346531 2363053 + MGP_NODShiLtJ_P0094967 Foxp3 protein_coding protein_coding MGP_NODShiLtJ_T0094968.1 MGP_NODShiLtJ_G0035307.1 mouse_genomes_project X 2346548 2363044 + MGP_NODShiLtJ_P0094968 Foxp3 protein_coding protein_coding MGP_NODShiLtJ_T0094969.1 MGP_NODShiLtJ_G0035307.1 mouse_genomes_project X 2347338 2363044 + MGP_NODShiLtJ_P0094969 Foxp3 protein_coding protein_coding MGP_NODShiLtJ_T0094970.1 MGP_NODShiLtJ_G0035307.1 mouse_genomes_project X 2353096 2363053 + MGP_NODShiLtJ_P0094970 Foxp3 protein_coding protein_coding MGP_NODShiLtJ_T0095699.1 MGP_NODShiLtJ_G0035537.1 mouse_genomes_project X 57356870 57365050 - MGP_NODShiLtJ_P0095699 Gpr101 protein_coding protein_coding MGP_NODShiLtJ_T0100988.1 MGP_NODShiLtJ_G0039382.1 mouse_genomes_project X 180657954 180658084 + Gm22023 snoRNA snoRNA MGP_NODShiLtJ_T0009303.1 MGP_NODShiLtJ_G0007461.1 mouse_genomes_project X 56051763 56054845 + 1600025M17Rik lincRNA lincRNA MGP_NODShiLtJ_T0009304.1 MGP_NODShiLtJ_G0007461.1 mouse_genomes_project X 56051821 56053705 + 1600025M17Rik lincRNA lincRNA MGP_NODShiLtJ_T0095386.1 MGP_NODShiLtJ_G0035428.1 mouse_genomes_project X 33937057 33938631 + MGP_NODShiLtJ_P0095386 Sowahd protein_coding protein_coding MGP_NODShiLtJ_T0094952.1 MGP_NODShiLtJ_G0035303.1 mouse_genomes_project X 1792656 1803124 + MGP_NODShiLtJ_P0094952 Akap4 protein_coding protein_coding MGP_NODShiLtJ_T0094953.1 MGP_NODShiLtJ_G0035303.1 mouse_genomes_project X 1792657 1803119 + MGP_NODShiLtJ_P0094953 Akap4 protein_coding protein_coding MGP_NODShiLtJ_T0094954.1 MGP_NODShiLtJ_G0035303.1 mouse_genomes_project X 1793350 1803106 + MGP_NODShiLtJ_P0094954 Akap4 protein_coding protein_coding MGP_NODShiLtJ_T0097325.1 MGP_NODShiLtJ_G0035981.1 mouse_genomes_project X 169575871 169578559 + MGP_NODShiLtJ_P0097325 Samt4 protein_coding protein_coding MGP_NODShiLtJ_T0016250.1 MGP_NODShiLtJ_G0014358.1 mouse_genomes_project X 62546673 62547903 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102255.1 MGP_NODShiLtJ_G0040421.1 mouse_genomes_project X 90829898 90830931 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102267.1 MGP_NODShiLtJ_G0040433.1 mouse_genomes_project X 110101115 110125770 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095047.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2640854 2641499 + Otud5 protein_coding processed_transcript MGP_NODShiLtJ_T0095048.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2641321 2677481 + MGP_NODShiLtJ_P0095048 Otud5 protein_coding protein_coding MGP_NODShiLtJ_T0095049.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2641346 2675715 + MGP_NODShiLtJ_P0095049 Otud5 protein_coding protein_coding MGP_NODShiLtJ_T0095050.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2641546 2676140 + MGP_NODShiLtJ_P0095050 Otud5 protein_coding protein_coding MGP_NODShiLtJ_T0095051.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2641572 2676145 + MGP_NODShiLtJ_P0095051 Otud5 protein_coding protein_coding MGP_NODShiLtJ_T0095052.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2641606 2677475 + MGP_NODShiLtJ_P0095052 Otud5 protein_coding protein_coding MGP_NODShiLtJ_T0095053.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2642095 2676139 + Otud5 protein_coding retained_intron MGP_NODShiLtJ_T0095054.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2642096 2668819 + Otud5 protein_coding retained_intron MGP_NODShiLtJ_T0095055.1 MGP_NODShiLtJ_G0035322.1 mouse_genomes_project X 2655552 2668419 + Otud5 protein_coding retained_intron MGP_NODShiLtJ_T0011088.1 MGP_NODShiLtJ_G0009221.1 mouse_genomes_project X 111047364 111047413 + Mir374c miRNA miRNA MGP_NODShiLtJ_T0016057.1 MGP_NODShiLtJ_G0014165.1 mouse_genomes_project X 325133 326590 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097058.1 MGP_NODShiLtJ_G0035920.1 mouse_genomes_project X 154429689 154467747 + MGP_NODShiLtJ_P0097058 Vsig1 protein_coding protein_coding MGP_NODShiLtJ_T0097059.1 MGP_NODShiLtJ_G0035920.1 mouse_genomes_project X 154448270 154466492 + Vsig1 protein_coding processed_transcript MGP_NODShiLtJ_T0016374.1 MGP_NODShiLtJ_G0014482.1 mouse_genomes_project X 94745803 94746144 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011068.1 MGP_NODShiLtJ_G0009201.1 mouse_genomes_project X 74515876 74515958 - Mir224 miRNA miRNA MGP_NODShiLtJ_T0016519.1 MGP_NODShiLtJ_G0014627.1 mouse_genomes_project X 121328072 121331943 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009368.1 MGP_NODShiLtJ_G0007501.1 mouse_genomes_project X 186300813 186327860 + Gm15245 lincRNA lincRNA MGP_NODShiLtJ_T0016113.1 MGP_NODShiLtJ_G0014221.1 mouse_genomes_project X 12385894 12388489 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011056.1 MGP_NODShiLtJ_G0009189.1 mouse_genomes_project X 68110334 68110412 - Mir881 miRNA miRNA MGP_NODShiLtJ_T0016414.1 MGP_NODShiLtJ_G0014522.1 mouse_genomes_project X 102655675 102656113 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011018.1 MGP_NODShiLtJ_G0009151.1 mouse_genomes_project X 20773393 20773495 + Gm25299 miRNA miRNA MGP_NODShiLtJ_T0016364.1 MGP_NODShiLtJ_G0014472.1 mouse_genomes_project X 93164363 93164899 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095000.1 MGP_NODShiLtJ_G0035315.1 mouse_genomes_project X 2472017 2485063 + MGP_NODShiLtJ_P0095000 Gpkow protein_coding protein_coding MGP_NODShiLtJ_T0095001.1 MGP_NODShiLtJ_G0035315.1 mouse_genomes_project X 2478404 2482912 + MGP_NODShiLtJ_P0095001 Gpkow protein_coding protein_coding MGP_NODShiLtJ_T0095002.1 MGP_NODShiLtJ_G0035315.1 mouse_genomes_project X 2480746 2483101 + Gpkow protein_coding retained_intron MGP_NODShiLtJ_T0016729.1 MGP_NODShiLtJ_G0014837.1 mouse_genomes_project X 173163154 173163851 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102234.1 MGP_NODShiLtJ_G0040400.1 mouse_genomes_project X 4032597 4033125 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095659.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56515333 56586438 + MGP_NODShiLtJ_P0095659 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095660.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56515411 56586430 + MGP_NODShiLtJ_P0095660 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095661.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56517235 56585327 + MGP_NODShiLtJ_P0095661 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095662.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56572544 56586432 + MGP_NODShiLtJ_P0095662 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095663.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56572830 56586432 + MGP_NODShiLtJ_P0095663 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095664.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56572837 56585680 + MGP_NODShiLtJ_P0095664 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095665.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56572926 56582297 + MGP_NODShiLtJ_P0095665 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095666.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56579625 56583758 + MGP_NODShiLtJ_P0095666 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095667.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56580816 56582347 + MGP_NODShiLtJ_P0095667 Fhl1 protein_coding protein_coding MGP_NODShiLtJ_T0095668.1 MGP_NODShiLtJ_G0035527.1 mouse_genomes_project X 56581089 56582835 + Fhl1 protein_coding processed_transcript MGP_NODShiLtJ_T0016559.1 MGP_NODShiLtJ_G0014667.1 mouse_genomes_project X 128193103 128194908 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016704.1 MGP_NODShiLtJ_G0014812.1 mouse_genomes_project X 167331748 167332656 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102246.1 MGP_NODShiLtJ_G0040412.1 mouse_genomes_project X 67223559 67223922 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016171.1 MGP_NODShiLtJ_G0014279.1 mouse_genomes_project X 40005389 40005557 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016300.1 MGP_NODShiLtJ_G0014408.1 mouse_genomes_project X 77039697 77040085 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102272.1 MGP_NODShiLtJ_G0040438.1 mouse_genomes_project X 110263311 110264048 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009309.1 MGP_NODShiLtJ_G0007465.1 mouse_genomes_project X 70377777 70388655 - Fmr1os lincRNA lincRNA MGP_NODShiLtJ_T0011667.1 MGP_NODShiLtJ_G0009800.1 mouse_genomes_project X 150783391 150783676 - Gm25393 misc_RNA misc_RNA MGP_NODShiLtJ_T0096431.1 MGP_NODShiLtJ_G0035723.1 mouse_genomes_project X 107585910 107590742 - MGP_NODShiLtJ_P0096431 P2ry4 protein_coding protein_coding MGP_NODShiLtJ_T0011114.1 MGP_NODShiLtJ_G0009247.1 mouse_genomes_project X 166560152 166560228 + Mir3113 miRNA miRNA MGP_NODShiLtJ_T0016557.1 MGP_NODShiLtJ_G0014665.1 mouse_genomes_project X 127806326 127806530 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095045.1 MGP_NODShiLtJ_G0035321.1 mouse_genomes_project X 2621047 2637084 + MGP_NODShiLtJ_P0095045 Kcnd1 protein_coding protein_coding MGP_NODShiLtJ_T0095046.1 MGP_NODShiLtJ_G0035321.1 mouse_genomes_project X 2621065 2622026 + Kcnd1 protein_coding processed_transcript MGP_NODShiLtJ_T0018527.1 MGP_NODShiLtJ_G0015664.1 mouse_genomes_project X 186162504 186206092 + Gm15246 processed_transcript processed_transcript MGP_NODShiLtJ_T0018528.1 MGP_NODShiLtJ_G0015664.1 mouse_genomes_project X 186162504 186216584 + Gm15246 processed_transcript processed_transcript MGP_NODShiLtJ_T0095381.1 MGP_NODShiLtJ_G0035427.1 mouse_genomes_project X 33794364 33876595 - MGP_NODShiLtJ_P0095381 Sept6 protein_coding protein_coding MGP_NODShiLtJ_T0095382.1 MGP_NODShiLtJ_G0035427.1 mouse_genomes_project X 33796484 33876595 - MGP_NODShiLtJ_P0095382 Sept6 protein_coding protein_coding MGP_NODShiLtJ_T0095383.1 MGP_NODShiLtJ_G0035427.1 mouse_genomes_project X 33798069 33876595 - MGP_NODShiLtJ_P0095383 Sept6 protein_coding protein_coding MGP_NODShiLtJ_T0095384.1 MGP_NODShiLtJ_G0035427.1 mouse_genomes_project X 33853511 33879119 - MGP_NODShiLtJ_P0095384 Sept6 protein_coding protein_coding MGP_NODShiLtJ_T0095385.1 MGP_NODShiLtJ_G0035427.1 mouse_genomes_project X 33858817 33876430 - Sept6 protein_coding retained_intron MGP_NODShiLtJ_T0095291.1 MGP_NODShiLtJ_G0035395.1 mouse_genomes_project X 16996346 17013594 + MGP_NODShiLtJ_P0095291 Usp11 protein_coding protein_coding MGP_NODShiLtJ_T0095292.1 MGP_NODShiLtJ_G0035395.1 mouse_genomes_project X 16996374 17006429 + Usp11 protein_coding processed_transcript MGP_NODShiLtJ_T0095293.1 MGP_NODShiLtJ_G0035395.1 mouse_genomes_project X 16996400 17010740 + Usp11 protein_coding retained_intron MGP_NODShiLtJ_T0095294.1 MGP_NODShiLtJ_G0035395.1 mouse_genomes_project X 17005100 17013592 + Usp11 protein_coding retained_intron MGP_NODShiLtJ_T0016496.1 MGP_NODShiLtJ_G0014604.1 mouse_genomes_project X 114640266 114640484 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018442.1 MGP_NODShiLtJ_G0015635.1 mouse_genomes_project X 2325438 2373125 - Gm36995 processed_transcript retained_intron MGP_NODShiLtJ_T0096748.1 MGP_NODShiLtJ_G0035817.1 mouse_genomes_project X 124202799 124203728 + MGP_NODShiLtJ_P0096748 Ube2dnl2 protein_coding protein_coding MGP_NODShiLtJ_T0016353.1 MGP_NODShiLtJ_G0014461.1 mouse_genomes_project X 90084571 90085157 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016712.1 MGP_NODShiLtJ_G0014820.1 mouse_genomes_project X 168755685 168755965 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095719.1 MGP_NODShiLtJ_G0035543.1 mouse_genomes_project X 60334610 60739521 - MGP_NODShiLtJ_P0095719 Atp11c protein_coding protein_coding MGP_NODShiLtJ_T0095720.1 MGP_NODShiLtJ_G0035543.1 mouse_genomes_project X 60334613 60531036 - MGP_NODShiLtJ_P0095720 Atp11c protein_coding protein_coding MGP_NODShiLtJ_T0095721.1 MGP_NODShiLtJ_G0035543.1 mouse_genomes_project X 60334613 60531036 - MGP_NODShiLtJ_P0095721 Atp11c protein_coding protein_coding MGP_NODShiLtJ_T0095722.1 MGP_NODShiLtJ_G0035543.1 mouse_genomes_project X 60336943 60382599 - Atp11c protein_coding processed_transcript MGP_NODShiLtJ_T0095723.1 MGP_NODShiLtJ_G0035543.1 mouse_genomes_project X 60346721 60739521 - Atp11c protein_coding processed_transcript MGP_NODShiLtJ_T0097088.1 MGP_NODShiLtJ_G0035934.1 mouse_genomes_project X 156809261 156813959 + MGP_NODShiLtJ_P0097088 Rgag1 protein_coding protein_coding MGP_NODShiLtJ_T0016563.1 MGP_NODShiLtJ_G0014671.1 mouse_genomes_project X 130382614 130383470 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096094.1 MGP_NODShiLtJ_G0035626.1 mouse_genomes_project X 76834990 76841909 + MGP_NODShiLtJ_P0096094 Fam50a protein_coding protein_coding MGP_NODShiLtJ_T0096095.1 MGP_NODShiLtJ_G0035626.1 mouse_genomes_project X 76835083 76841894 + Fam50a protein_coding retained_intron MGP_NODShiLtJ_T0096096.1 MGP_NODShiLtJ_G0035626.1 mouse_genomes_project X 76839197 76839695 + Fam50a protein_coding retained_intron MGP_NODShiLtJ_T0097500.1 MGP_NODShiLtJ_G0036028.1 mouse_genomes_project X 180641335 180738436 + MGP_NODShiLtJ_P0097500 Pir protein_coding protein_coding MGP_NODShiLtJ_T0097501.1 MGP_NODShiLtJ_G0036028.1 mouse_genomes_project X 180641395 180742326 + MGP_NODShiLtJ_P0097501 Pir protein_coding protein_coding MGP_NODShiLtJ_T0097502.1 MGP_NODShiLtJ_G0036028.1 mouse_genomes_project X 180641475 180643839 + Pir protein_coding retained_intron MGP_NODShiLtJ_T0097503.1 MGP_NODShiLtJ_G0036028.1 mouse_genomes_project X 180641511 180719269 + Pir protein_coding retained_intron MGP_NODShiLtJ_T0097504.1 MGP_NODShiLtJ_G0036028.1 mouse_genomes_project X 180641537 180688146 + Pir protein_coding processed_transcript MGP_NODShiLtJ_T0016391.1 MGP_NODShiLtJ_G0014499.1 mouse_genomes_project X 99615429 99618166 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016509.1 MGP_NODShiLtJ_G0014617.1 mouse_genomes_project X 117462204 117463088 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016409.1 MGP_NODShiLtJ_G0014517.1 mouse_genomes_project X 101075973 101076603 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095078.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2733018 2751638 - MGP_NODShiLtJ_P0095078 Hdac6 protein_coding protein_coding MGP_NODShiLtJ_T0095079.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2733020 2751638 - MGP_NODShiLtJ_P0095079 Hdac6 protein_coding protein_coding MGP_NODShiLtJ_T0095080.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2733022 2751587 - Hdac6 protein_coding retained_intron MGP_NODShiLtJ_T0095081.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2734257 2751638 - MGP_NODShiLtJ_P0095081 Hdac6 protein_coding protein_coding MGP_NODShiLtJ_T0095082.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2734453 2737384 - Hdac6 protein_coding retained_intron MGP_NODShiLtJ_T0095083.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2741083 2742433 - Hdac6 protein_coding retained_intron MGP_NODShiLtJ_T0095084.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2741190 2743725 - Hdac6 protein_coding retained_intron MGP_NODShiLtJ_T0095085.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2747145 2750908 - Hdac6 protein_coding retained_intron MGP_NODShiLtJ_T0095086.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2747169 2751302 - MGP_NODShiLtJ_P0095086 Hdac6 protein_coding protein_coding MGP_NODShiLtJ_T0095087.1 MGP_NODShiLtJ_G0035331.1 mouse_genomes_project X 2750740 2751516 - MGP_NODShiLtJ_P0095087 Hdac6 protein_coding protein_coding MGP_NODShiLtJ_T0100966.1 MGP_NODShiLtJ_G0039360.1 mouse_genomes_project X 131436465 131436593 + Gm22590 snoRNA snoRNA MGP_NODShiLtJ_T0095853.1 MGP_NODShiLtJ_G0035595.1 mouse_genomes_project X 75858886 75886134 - MGP_NODShiLtJ_P0095853 Haus7 protein_coding protein_coding MGP_NODShiLtJ_T0095854.1 MGP_NODShiLtJ_G0035595.1 mouse_genomes_project X 75858886 75886134 - MGP_NODShiLtJ_P0095854 Haus7 protein_coding protein_coding MGP_NODShiLtJ_T0095855.1 MGP_NODShiLtJ_G0035595.1 mouse_genomes_project X 75858888 75869668 - Haus7 protein_coding processed_transcript MGP_NODShiLtJ_T0016453.1 MGP_NODShiLtJ_G0014561.1 mouse_genomes_project X 110395859 110396549 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098120.1 MGP_NODShiLtJ_G0036532.1 mouse_genomes_project X 5679637 5679746 + Gm25885 rRNA rRNA MGP_NODShiLtJ_T0096566.1 MGP_NODShiLtJ_G0035752.1 mouse_genomes_project X 109481296 109704212 - MGP_NODShiLtJ_P0096566 Hdac8 protein_coding protein_coding MGP_NODShiLtJ_T0096567.1 MGP_NODShiLtJ_G0035752.1 mouse_genomes_project X 109606656 109703934 - MGP_NODShiLtJ_P0096567 Hdac8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096568.1 MGP_NODShiLtJ_G0035752.1 mouse_genomes_project X 109608611 109703999 - Hdac8 protein_coding processed_transcript MGP_NODShiLtJ_T0096569.1 MGP_NODShiLtJ_G0035752.1 mouse_genomes_project X 109615902 109704198 - Hdac8 protein_coding processed_transcript MGP_NODShiLtJ_T0096570.1 MGP_NODShiLtJ_G0035752.1 mouse_genomes_project X 109697014 109703594 - Hdac8 protein_coding retained_intron MGP_NODShiLtJ_T0016398.1 MGP_NODShiLtJ_G0014506.1 mouse_genomes_project X 100496115 100496968 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016564.1 MGP_NODShiLtJ_G0014672.1 mouse_genomes_project X 130451349 130451826 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098213.1 MGP_NODShiLtJ_G0036625.1 mouse_genomes_project X 32632487 32632762 + Gm25624 scaRNA scaRNA MGP_NODShiLtJ_T0016520.1 MGP_NODShiLtJ_G0014628.1 mouse_genomes_project X 121333909 121335536 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095164.1 MGP_NODShiLtJ_G0035358.1 mouse_genomes_project X 4908779 4909332 + MGP_NODShiLtJ_P0095164 4930557A04Rik protein_coding protein_coding MGP_NODShiLtJ_T0094994.1 MGP_NODShiLtJ_G0035312.1 mouse_genomes_project X 2437670 2442453 - Plp2 protein_coding retained_intron MGP_NODShiLtJ_T0094995.1 MGP_NODShiLtJ_G0035312.1 mouse_genomes_project X 2437670 2442471 - MGP_NODShiLtJ_P0094995 Plp2 protein_coding protein_coding MGP_NODShiLtJ_T0094997.1 MGP_NODShiLtJ_G0035312.1 mouse_genomes_project X 2440411 2442394 - Plp2 protein_coding retained_intron MGP_NODShiLtJ_T0016532.1 MGP_NODShiLtJ_G0014640.1 mouse_genomes_project X 123165643 123172058 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011646.1 MGP_NODShiLtJ_G0009779.1 mouse_genomes_project X 52640444 52640751 + Gm23718 misc_RNA misc_RNA MGP_NODShiLtJ_T0097317.1 MGP_NODShiLtJ_G0035978.1 mouse_genomes_project X 168700212 168718994 + MGP_NODShiLtJ_P0097317 2210013O21Rik protein_coding protein_coding MGP_NODShiLtJ_T0097318.1 MGP_NODShiLtJ_G0035978.1 mouse_genomes_project X 168700232 168719650 + MGP_NODShiLtJ_P0097318 2210013O21Rik protein_coding protein_coding MGP_NODShiLtJ_T0097319.1 MGP_NODShiLtJ_G0035978.1 mouse_genomes_project X 168700249 168705811 + MGP_NODShiLtJ_P0097319 2210013O21Rik protein_coding protein_coding MGP_NODShiLtJ_T0097320.1 MGP_NODShiLtJ_G0035978.1 mouse_genomes_project X 168700561 168718852 + 2210013O21Rik protein_coding processed_transcript MGP_NODShiLtJ_T0011012.1 MGP_NODShiLtJ_G0009145.1 mouse_genomes_project X 9078930 9078999 + Gm25246 miRNA miRNA MGP_NODShiLtJ_T0016200.1 MGP_NODShiLtJ_G0014308.1 mouse_genomes_project X 50353026 50353463 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016275.1 MGP_NODShiLtJ_G0014383.1 mouse_genomes_project X 69983878 69984244 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099667.1 MGP_NODShiLtJ_G0038061.1 mouse_genomes_project X 44257042 44257149 - Gm25078 snRNA snRNA MGP_NODShiLtJ_T0016716.1 MGP_NODShiLtJ_G0014824.1 mouse_genomes_project X 170341695 170342055 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016351.1 MGP_NODShiLtJ_G0014459.1 mouse_genomes_project X 89555841 89556956 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009294.1 MGP_NODShiLtJ_G0007454.1 mouse_genomes_project X 17759652 17763418 - Gm26593 lincRNA lincRNA MGP_NODShiLtJ_T0102244.1 MGP_NODShiLtJ_G0040410.1 mouse_genomes_project X 55813436 55819682 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011060.1 MGP_NODShiLtJ_G0009193.1 mouse_genomes_project X 68144568 68144649 - Mir465c-2 miRNA miRNA MGP_NODShiLtJ_T0095638.1 MGP_NODShiLtJ_G0035516.1 mouse_genomes_project X 53026958 53032375 - MGP_NODShiLtJ_P0095638 protein_coding protein_coding MGP_NODShiLtJ_T0096749.1 MGP_NODShiLtJ_G0035818.1 mouse_genomes_project X 125728815 125729162 + MGP_NODShiLtJ_P0096749 protein_coding protein_coding MGP_NODShiLtJ_T0016717.1 MGP_NODShiLtJ_G0014825.1 mouse_genomes_project X 170371066 170371696 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016692.1 MGP_NODShiLtJ_G0014800.1 mouse_genomes_project X 164958978 164961409 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096809.1 MGP_NODShiLtJ_G0035842.1 mouse_genomes_project X 146771737 146783557 + MGP_NODShiLtJ_P0096809 Tmem35a protein_coding protein_coding MGP_NODShiLtJ_T0095420.1 MGP_NODShiLtJ_G0035450.1 mouse_genomes_project X 35077404 35085856 + MGP_NODShiLtJ_P0095420 Zbtb33 protein_coding protein_coding MGP_NODShiLtJ_T0095421.1 MGP_NODShiLtJ_G0035450.1 mouse_genomes_project X 35077423 35082296 + MGP_NODShiLtJ_P0095421 Zbtb33 protein_coding protein_coding MGP_NODShiLtJ_T0095422.1 MGP_NODShiLtJ_G0035450.1 mouse_genomes_project X 35077445 35081680 + MGP_NODShiLtJ_P0095422 Zbtb33 protein_coding protein_coding MGP_NODShiLtJ_T0011098.1 MGP_NODShiLtJ_G0009231.1 mouse_genomes_project X 148468630 148468684 + Mir7646 miRNA miRNA MGP_NODShiLtJ_T0016578.1 MGP_NODShiLtJ_G0014686.1 mouse_genomes_project X 137563815 137564318 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016713.1 MGP_NODShiLtJ_G0014821.1 mouse_genomes_project X 169267624 169268223 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016663.1 MGP_NODShiLtJ_G0014771.1 mouse_genomes_project X 156200873 156201406 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016497.1 MGP_NODShiLtJ_G0014605.1 mouse_genomes_project X 114640669 114641075 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016146.1 MGP_NODShiLtJ_G0014254.1 mouse_genomes_project X 33227281 33227575 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099649.1 MGP_NODShiLtJ_G0038043.1 mouse_genomes_project X 2919295 2919397 + Gm22083 snRNA snRNA MGP_NODShiLtJ_T0018526.1 MGP_NODShiLtJ_G0015663.1 mouse_genomes_project X 178923190 178924726 - Gm15201 processed_transcript processed_transcript MGP_NODShiLtJ_T0016502.1 MGP_NODShiLtJ_G0014610.1 mouse_genomes_project X 115323561 115324588 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009367.1 MGP_NODShiLtJ_G0007500.1 mouse_genomes_project X 183789596 183796723 + Gm15228 lincRNA lincRNA MGP_NODShiLtJ_T0016117.1 MGP_NODShiLtJ_G0014225.1 mouse_genomes_project X 14368853 14369010 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096359.1 MGP_NODShiLtJ_G0035702.1 mouse_genomes_project X 102358990 102399786 - MGP_NODShiLtJ_P0096359 Las1l protein_coding protein_coding MGP_NODShiLtJ_T0096360.1 MGP_NODShiLtJ_G0035702.1 mouse_genomes_project X 102358990 102399786 - MGP_NODShiLtJ_P0096360 Las1l protein_coding protein_coding MGP_NODShiLtJ_T0096361.1 MGP_NODShiLtJ_G0035702.1 mouse_genomes_project X 102364379 102399759 - Las1l protein_coding retained_intron MGP_NODShiLtJ_T0096362.1 MGP_NODShiLtJ_G0035702.1 mouse_genomes_project X 102377532 102381654 - Las1l protein_coding processed_transcript MGP_NODShiLtJ_T0096363.1 MGP_NODShiLtJ_G0035702.1 mouse_genomes_project X 102380030 102399835 - Las1l protein_coding retained_intron MGP_NODShiLtJ_T0096955.1 MGP_NODShiLtJ_G0035888.1 mouse_genomes_project X 149715029 149732883 - MGP_NODShiLtJ_P0096955 Rab9b protein_coding protein_coding MGP_NODShiLtJ_T0011658.1 MGP_NODShiLtJ_G0009791.1 mouse_genomes_project X 111079476 111079569 + Gm27987 misc_RNA misc_RNA MGP_NODShiLtJ_T0099664.1 MGP_NODShiLtJ_G0038058.1 mouse_genomes_project X 33948441 33948550 - Gm26099 snRNA snRNA MGP_NODShiLtJ_T0016090.1 MGP_NODShiLtJ_G0014198.1 mouse_genomes_project X 6916108 6916231 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009311.1 MGP_NODShiLtJ_G0007467.1 mouse_genomes_project X 78706566 78722834 - Gm14715 lincRNA lincRNA MGP_NODShiLtJ_T0096606.1 MGP_NODShiLtJ_G0035769.1 mouse_genomes_project X 111834582 111982956 - MGP_NODShiLtJ_P0096606 Abcb7 protein_coding protein_coding MGP_NODShiLtJ_T0096607.1 MGP_NODShiLtJ_G0035769.1 mouse_genomes_project X 111908619 111982966 - Abcb7 protein_coding retained_intron MGP_NODShiLtJ_T0016239.1 MGP_NODShiLtJ_G0014347.1 mouse_genomes_project X 60984275 60984850 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096909.1 MGP_NODShiLtJ_G0035875.1 mouse_genomes_project X 148984286 148987548 - MGP_NODShiLtJ_P0096909 Tceal8 protein_coding protein_coding MGP_NODShiLtJ_T0096910.1 MGP_NODShiLtJ_G0035875.1 mouse_genomes_project X 148985383 148987639 - MGP_NODShiLtJ_P0096910 Tceal8 protein_coding protein_coding MGP_NODShiLtJ_T0096911.1 MGP_NODShiLtJ_G0035875.1 mouse_genomes_project X 148986187 148987513 - MGP_NODShiLtJ_P0096911 Tceal8 protein_coding protein_coding MGP_NODShiLtJ_T0096912.1 MGP_NODShiLtJ_G0035875.1 mouse_genomes_project X 148986291 148987498 - MGP_NODShiLtJ_P0096912 Tceal8 protein_coding protein_coding MGP_NODShiLtJ_T0016120.1 MGP_NODShiLtJ_G0014228.1 mouse_genomes_project X 15500369 15500865 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096008.1 MGP_NODShiLtJ_G0035616.1 mouse_genomes_project X 76620480 76647865 + MGP_NODShiLtJ_P0096008 Opn1mw protein_coding protein_coding MGP_NODShiLtJ_T0096009.1 MGP_NODShiLtJ_G0035616.1 mouse_genomes_project X 76620482 76647856 + MGP_NODShiLtJ_P0096009 Opn1mw protein_coding protein_coding MGP_NODShiLtJ_T0096010.1 MGP_NODShiLtJ_G0035616.1 mouse_genomes_project X 76620497 76639562 + Opn1mw protein_coding processed_transcript MGP_NODShiLtJ_T0096011.1 MGP_NODShiLtJ_G0035616.1 mouse_genomes_project X 76633911 76647861 + Opn1mw protein_coding processed_transcript MGP_NODShiLtJ_T0096012.1 MGP_NODShiLtJ_G0035616.1 mouse_genomes_project X 76633932 76635875 + Opn1mw protein_coding processed_transcript MGP_NODShiLtJ_T0096013.1 MGP_NODShiLtJ_G0035616.1 mouse_genomes_project X 76634429 76647861 + MGP_NODShiLtJ_P0096013 Opn1mw protein_coding protein_coding MGP_NODShiLtJ_T0005555.1 MGP_NODShiLtJ_G0004675.1 mouse_genomes_project X 183988166 183991117 + Gm15239 antisense antisense MGP_NODShiLtJ_T0095636.1 MGP_NODShiLtJ_G0035514.1 mouse_genomes_project X 52918004 52919863 - MGP_NODShiLtJ_P0095636 Gm14597 protein_coding protein_coding MGP_NODShiLtJ_T0005522.1 MGP_NODShiLtJ_G0004649.1 mouse_genomes_project X 56113695 56116866 - Gm2155 antisense antisense MGP_NODShiLtJ_T0016259.1 MGP_NODShiLtJ_G0014367.1 mouse_genomes_project X 64045622 64045924 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016565.1 MGP_NODShiLtJ_G0014673.1 mouse_genomes_project X 130637260 130637513 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005519.1 MGP_NODShiLtJ_G0004647.1 mouse_genomes_project X 51543437 51581885 + Gm14582 antisense antisense MGP_NODShiLtJ_T0099684.1 MGP_NODShiLtJ_G0038078.1 mouse_genomes_project X 93337892 93337999 + Gm25006 snRNA snRNA MGP_NODShiLtJ_T0011031.1 MGP_NODShiLtJ_G0009164.1 mouse_genomes_project X 51992400 51992484 - Mir19b-2 miRNA miRNA MGP_NODShiLtJ_T0009359.1 MGP_NODShiLtJ_G0007494.1 mouse_genomes_project X 177931922 177933776 - Scml1 lincRNA lincRNA MGP_NODShiLtJ_T0016556.1 MGP_NODShiLtJ_G0014664.1 mouse_genomes_project X 127787183 127792018 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096884.1 MGP_NODShiLtJ_G0035865.1 mouse_genomes_project X 148325332 148340323 - MGP_NODShiLtJ_P0096884 Prame protein_coding protein_coding MGP_NODShiLtJ_T0096885.1 MGP_NODShiLtJ_G0035865.1 mouse_genomes_project X 148325474 148328136 - MGP_NODShiLtJ_P0096885 Prame protein_coding protein_coding MGP_NODShiLtJ_T0016282.1 MGP_NODShiLtJ_G0014390.1 mouse_genomes_project X 70688797 70689653 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016196.1 MGP_NODShiLtJ_G0014304.1 mouse_genomes_project X 48966898 48967571 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016147.1 MGP_NODShiLtJ_G0014255.1 mouse_genomes_project X 33534736 33535533 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016690.1 MGP_NODShiLtJ_G0014798.1 mouse_genomes_project X 164854140 164854344 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097479.1 MGP_NODShiLtJ_G0036021.1 mouse_genomes_project X 180272975 180296398 - MGP_NODShiLtJ_P0097479 Zrsr2 protein_coding protein_coding MGP_NODShiLtJ_T0097480.1 MGP_NODShiLtJ_G0036021.1 mouse_genomes_project X 180276873 180288025 - Zrsr2 protein_coding retained_intron MGP_NODShiLtJ_T0097481.1 MGP_NODShiLtJ_G0036021.1 mouse_genomes_project X 180277776 180281285 - Zrsr2 protein_coding retained_intron MGP_NODShiLtJ_T0097482.1 MGP_NODShiLtJ_G0036021.1 mouse_genomes_project X 180286747 180288267 - Zrsr2 protein_coding retained_intron MGP_NODShiLtJ_T0097483.1 MGP_NODShiLtJ_G0036021.1 mouse_genomes_project X 180288194 180296407 - MGP_NODShiLtJ_P0097483 Zrsr2 protein_coding protein_coding MGP_NODShiLtJ_T0097484.1 MGP_NODShiLtJ_G0036021.1 mouse_genomes_project X 180291399 180295971 - Zrsr2 protein_coding processed_transcript MGP_NODShiLtJ_T0097485.1 MGP_NODShiLtJ_G0036021.1 mouse_genomes_project X 180291448 180296361 - MGP_NODShiLtJ_P0097485 Zrsr2 protein_coding protein_coding MGP_NODShiLtJ_T0097486.1 MGP_NODShiLtJ_G0036021.1 mouse_genomes_project X 180294280 180296470 - MGP_NODShiLtJ_P0097486 Zrsr2 protein_coding protein_coding MGP_NODShiLtJ_T0016262.1 MGP_NODShiLtJ_G0014370.1 mouse_genomes_project X 65829723 65831103 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005550.1 MGP_NODShiLtJ_G0004671.1 mouse_genomes_project X 173398378 173433114 - Gm15169 antisense antisense MGP_NODShiLtJ_T0005551.1 MGP_NODShiLtJ_G0004671.1 mouse_genomes_project X 173419180 173433107 - Gm15169 antisense antisense MGP_NODShiLtJ_T0096375.1 MGP_NODShiLtJ_G0035707.1 mouse_genomes_project X 103263268 103266352 + Gpr165 protein_coding retained_intron MGP_NODShiLtJ_T0096376.1 MGP_NODShiLtJ_G0035707.1 mouse_genomes_project X 103263319 103269316 + MGP_NODShiLtJ_P0096376 Gpr165 protein_coding protein_coding MGP_NODShiLtJ_T0096377.1 MGP_NODShiLtJ_G0035707.1 mouse_genomes_project X 103263340 103265617 + Gpr165 protein_coding retained_intron MGP_NODShiLtJ_T0096378.1 MGP_NODShiLtJ_G0035707.1 mouse_genomes_project X 103264028 103269210 + Gpr165 protein_coding retained_intron MGP_NODShiLtJ_T0102240.1 MGP_NODShiLtJ_G0040406.1 mouse_genomes_project X 34963226 34963459 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016582.1 MGP_NODShiLtJ_G0014690.1 mouse_genomes_project X 139284647 139287442 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096951.1 MGP_NODShiLtJ_G0035887.1 mouse_genomes_project X 149673558 149694428 + MGP_NODShiLtJ_P0096951 Plp1 protein_coding protein_coding MGP_NODShiLtJ_T0096952.1 MGP_NODShiLtJ_G0035887.1 mouse_genomes_project X 149673677 149692493 + MGP_NODShiLtJ_P0096952 Plp1 protein_coding protein_coding MGP_NODShiLtJ_T0096953.1 MGP_NODShiLtJ_G0035887.1 mouse_genomes_project X 149684203 149685634 + Plp1 protein_coding retained_intron MGP_NODShiLtJ_T0096954.1 MGP_NODShiLtJ_G0035887.1 mouse_genomes_project X 149686292 149689457 + Plp1 protein_coding retained_intron MGP_NODShiLtJ_T0016094.1 MGP_NODShiLtJ_G0014202.1 mouse_genomes_project X 7458598 7458948 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099683.1 MGP_NODShiLtJ_G0038077.1 mouse_genomes_project X 85877223 85877323 + Gm22686 snRNA snRNA MGP_NODShiLtJ_T0100937.1 MGP_NODShiLtJ_G0039331.1 mouse_genomes_project X 33972404 33972535 - Snora69 snoRNA snoRNA MGP_NODShiLtJ_T0101231.1 MGP_NODShiLtJ_G0039525.1 mouse_genomes_project X 110992066 110993762 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0096732.1 MGP_NODShiLtJ_G0035812.1 mouse_genomes_project X 121456774 121482707 + protein_coding retained_intron MGP_NODShiLtJ_T0096733.1 MGP_NODShiLtJ_G0035812.1 mouse_genomes_project X 121460364 121491002 + MGP_NODShiLtJ_P0096733 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0096734.1 MGP_NODShiLtJ_G0035812.1 mouse_genomes_project X 121474605 121489356 + MGP_NODShiLtJ_P0096734 protein_coding protein_coding MGP_NODShiLtJ_T0005532.1 MGP_NODShiLtJ_G0004658.1 mouse_genomes_project X 78303082 78304901 + Gm15063 antisense antisense MGP_NODShiLtJ_T0011037.1 MGP_NODShiLtJ_G0009170.1 mouse_genomes_project X 52362607 52362676 - Mir450-2 miRNA miRNA MGP_NODShiLtJ_T0100938.1 MGP_NODShiLtJ_G0039332.1 mouse_genomes_project X 34415467 34415610 + Gm26494 snoRNA snoRNA MGP_NODShiLtJ_T0097446.1 MGP_NODShiLtJ_G0036012.1 mouse_genomes_project X 178580545 178745173 - MGP_NODShiLtJ_P0097446 Reps2 protein_coding protein_coding MGP_NODShiLtJ_T0097447.1 MGP_NODShiLtJ_G0036012.1 mouse_genomes_project X 178580545 178830343 - MGP_NODShiLtJ_P0097447 Reps2 protein_coding protein_coding MGP_NODShiLtJ_T0097448.1 MGP_NODShiLtJ_G0036012.1 mouse_genomes_project X 178580545 178830391 - MGP_NODShiLtJ_P0097448 Reps2 protein_coding protein_coding MGP_NODShiLtJ_T0097449.1 MGP_NODShiLtJ_G0036012.1 mouse_genomes_project X 178702775 178745271 - Reps2 protein_coding processed_transcript MGP_NODShiLtJ_T0097450.1 MGP_NODShiLtJ_G0036012.1 mouse_genomes_project X 178724445 178731401 - Reps2 protein_coding retained_intron MGP_NODShiLtJ_T0016376.1 MGP_NODShiLtJ_G0014484.1 mouse_genomes_project X 94789503 94790224 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095283.1 MGP_NODShiLtJ_G0035394.1 mouse_genomes_project X 16979092 16991019 + MGP_NODShiLtJ_P0095283 Cdk16 protein_coding protein_coding MGP_NODShiLtJ_T0095284.1 MGP_NODShiLtJ_G0035394.1 mouse_genomes_project X 16979137 16985501 + Cdk16 protein_coding processed_transcript MGP_NODShiLtJ_T0095285.1 MGP_NODShiLtJ_G0035394.1 mouse_genomes_project X 16979556 16991019 + MGP_NODShiLtJ_P0095285 Cdk16 protein_coding protein_coding MGP_NODShiLtJ_T0095286.1 MGP_NODShiLtJ_G0035394.1 mouse_genomes_project X 16985421 16987424 + Cdk16 protein_coding retained_intron MGP_NODShiLtJ_T0095287.1 MGP_NODShiLtJ_G0035394.1 mouse_genomes_project X 16986999 16987624 + Cdk16 protein_coding retained_intron MGP_NODShiLtJ_T0095288.1 MGP_NODShiLtJ_G0035394.1 mouse_genomes_project X 16987156 16988347 + Cdk16 protein_coding retained_intron MGP_NODShiLtJ_T0095289.1 MGP_NODShiLtJ_G0035394.1 mouse_genomes_project X 16987543 16988306 + Cdk16 protein_coding retained_intron MGP_NODShiLtJ_T0095290.1 MGP_NODShiLtJ_G0035394.1 mouse_genomes_project X 16987583 16990938 + Cdk16 protein_coding processed_transcript MGP_NODShiLtJ_T0016338.1 MGP_NODShiLtJ_G0014446.1 mouse_genomes_project X 83557183 83557342 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011656.1 MGP_NODShiLtJ_G0009789.1 mouse_genomes_project X 110948256 110948379 + Gm27875 misc_RNA misc_RNA MGP_NODShiLtJ_T0096404.1 MGP_NODShiLtJ_G0035714.1 mouse_genomes_project X 105995817 106008655 + MGP_NODShiLtJ_P0096404 Efnb1 protein_coding protein_coding MGP_NODShiLtJ_T0096405.1 MGP_NODShiLtJ_G0035714.1 mouse_genomes_project X 105997814 106006896 + Efnb1 protein_coding processed_transcript MGP_NODShiLtJ_T0095199.1 MGP_NODShiLtJ_G0035367.1 mouse_genomes_project X 7985479 8005302 - MGP_NODShiLtJ_P0095199 1810030O07Rik protein_coding protein_coding MGP_NODShiLtJ_T0016536.1 MGP_NODShiLtJ_G0014644.1 mouse_genomes_project X 124150486 124150693 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096703.1 MGP_NODShiLtJ_G0035798.1 mouse_genomes_project X 117328883 117344471 - MGP_NODShiLtJ_P0096703 Hmgn5 protein_coding protein_coding MGP_NODShiLtJ_T0016646.1 MGP_NODShiLtJ_G0014754.1 mouse_genomes_project X 154907287 154907503 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011112.1 MGP_NODShiLtJ_G0009245.1 mouse_genomes_project X 161573321 161573433 + Mir448 miRNA miRNA MGP_NODShiLtJ_T0096889.1 MGP_NODShiLtJ_G0035868.1 mouse_genomes_project X 148464647 148484553 + Gprasp1 protein_coding processed_transcript MGP_NODShiLtJ_T0096891.1 MGP_NODShiLtJ_G0035868.1 mouse_genomes_project X 148464647 148538302 + MGP_NODShiLtJ_P0096891 Gprasp1 protein_coding protein_coding MGP_NODShiLtJ_T0096892.1 MGP_NODShiLtJ_G0035868.1 mouse_genomes_project X 148464647 148538302 + MGP_NODShiLtJ_P0096892 Gprasp1 protein_coding protein_coding MGP_NODShiLtJ_T0096893.1 MGP_NODShiLtJ_G0035868.1 mouse_genomes_project X 148464647 148538302 + MGP_NODShiLtJ_P0096893 Gprasp1 protein_coding protein_coding MGP_NODShiLtJ_T0096894.1 MGP_NODShiLtJ_G0035868.1 mouse_genomes_project X 148464649 148507299 + Gprasp1 protein_coding processed_transcript MGP_NODShiLtJ_T0096898.1 MGP_NODShiLtJ_G0035868.1 mouse_genomes_project X 148529666 148538294 + MGP_NODShiLtJ_P0096898 Gprasp1 protein_coding protein_coding MGP_NODShiLtJ_T0095325.1 MGP_NODShiLtJ_G0035403.1 mouse_genomes_project X 17398259 17403332 + MGP_NODShiLtJ_P0095325 Spaca5 protein_coding protein_coding MGP_NODShiLtJ_T0100986.1 MGP_NODShiLtJ_G0039380.1 mouse_genomes_project X 178939662 178939783 + Gm23786 snoRNA snoRNA MGP_NODShiLtJ_T0016542.1 MGP_NODShiLtJ_G0014650.1 mouse_genomes_project X 124954939 124956731 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016336.1 MGP_NODShiLtJ_G0014444.1 mouse_genomes_project X 83200401 83201244 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018450.1 MGP_NODShiLtJ_G0015640.1 mouse_genomes_project X 17284594 17310743 + A230072C01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018451.1 MGP_NODShiLtJ_G0015640.1 mouse_genomes_project X 17285024 17310757 + A230072C01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0095474.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39684324 39697160 + Xiap protein_coding processed_transcript MGP_NODShiLtJ_T0095475.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39692473 39738466 + MGP_NODShiLtJ_P0095475 Xiap protein_coding protein_coding MGP_NODShiLtJ_T0095476.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39692518 39723368 + MGP_NODShiLtJ_P0095476 Xiap protein_coding protein_coding MGP_NODShiLtJ_T0095477.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39692555 39733626 + Xiap protein_coding processed_transcript MGP_NODShiLtJ_T0095478.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39692920 39738466 + MGP_NODShiLtJ_P0095478 Xiap protein_coding protein_coding MGP_NODShiLtJ_T0095479.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39692932 39697160 + Xiap protein_coding processed_transcript MGP_NODShiLtJ_T0095480.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39693277 39738466 + Xiap protein_coding processed_transcript MGP_NODShiLtJ_T0095481.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39695847 39738466 + MGP_NODShiLtJ_P0095481 Xiap protein_coding protein_coding MGP_NODShiLtJ_T0095482.1 MGP_NODShiLtJ_G0035462.1 mouse_genomes_project X 39722539 39738466 + MGP_NODShiLtJ_P0095482 Xiap protein_coding protein_coding MGP_NODShiLtJ_T0095592.1 MGP_NODShiLtJ_G0035496.1 mouse_genomes_project X 49462894 49463893 - MGP_NODShiLtJ_P0095592 Olfr1324 protein_coding protein_coding MGP_NODShiLtJ_T0096194.1 MGP_NODShiLtJ_G0035643.1 mouse_genomes_project X 78107453 78119153 - MGP_NODShiLtJ_P0096194 Cmc4 protein_coding protein_coding MGP_NODShiLtJ_T0096195.1 MGP_NODShiLtJ_G0035643.1 mouse_genomes_project X 78107633 78119172 - MGP_NODShiLtJ_P0096195 Cmc4 protein_coding protein_coding MGP_NODShiLtJ_T0096196.1 MGP_NODShiLtJ_G0035643.1 mouse_genomes_project X 78107677 78112519 - MGP_NODShiLtJ_P0096196 Cmc4 protein_coding protein_coding MGP_NODShiLtJ_T0097498.1 MGP_NODShiLtJ_G0036027.1 mouse_genomes_project X 180552874 180630517 - MGP_NODShiLtJ_P0097498 Bmx protein_coding protein_coding MGP_NODShiLtJ_T0097499.1 MGP_NODShiLtJ_G0036027.1 mouse_genomes_project X 180553387 180622705 - MGP_NODShiLtJ_P0097499 Bmx protein_coding protein_coding MGP_NODShiLtJ_T0016558.1 MGP_NODShiLtJ_G0014666.1 mouse_genomes_project X 128081007 128081358 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009299.1 MGP_NODShiLtJ_G0007459.1 mouse_genomes_project X 48265947 48302668 - Gm14696 lincRNA lincRNA MGP_NODShiLtJ_T0095887.1 MGP_NODShiLtJ_G0035603.1 mouse_genomes_project X 76211449 76226888 + Plxnb3 protein_coding retained_intron MGP_NODShiLtJ_T0095888.1 MGP_NODShiLtJ_G0035603.1 mouse_genomes_project X 76211449 76226888 + Plxnb3 protein_coding retained_intron MGP_NODShiLtJ_T0095889.1 MGP_NODShiLtJ_G0035603.1 mouse_genomes_project X 76211449 76226888 + Plxnb3 protein_coding retained_intron MGP_NODShiLtJ_T0095890.1 MGP_NODShiLtJ_G0035603.1 mouse_genomes_project X 76211458 76226888 + MGP_NODShiLtJ_P0095890 Plxnb3 protein_coding protein_coding MGP_NODShiLtJ_T0095891.1 MGP_NODShiLtJ_G0035603.1 mouse_genomes_project X 76219903 76224037 + Plxnb3 protein_coding retained_intron MGP_NODShiLtJ_T0009308.1 MGP_NODShiLtJ_G0007464.1 mouse_genomes_project X 68936516 68936825 + lincRNA lincRNA MGP_NODShiLtJ_T0016781.1 MGP_NODShiLtJ_G0014889.1 mouse_genomes_project X 184455204 184456500 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016186.1 MGP_NODShiLtJ_G0014294.1 mouse_genomes_project X 45041984 45042392 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016420.1 MGP_NODShiLtJ_G0014528.1 mouse_genomes_project X 103538910 103539302 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005542.1 MGP_NODShiLtJ_G0004666.1 mouse_genomes_project X 110821980 110823193 - Gm26952 antisense antisense MGP_NODShiLtJ_T0095159.1 MGP_NODShiLtJ_G0035356.1 mouse_genomes_project X 4687252 4696770 - MGP_NODShiLtJ_P0095159 Dynlt3 protein_coding protein_coding MGP_NODShiLtJ_T0095160.1 MGP_NODShiLtJ_G0035356.1 mouse_genomes_project X 4689782 4693397 - Dynlt3 protein_coding processed_transcript MGP_NODShiLtJ_T0095161.1 MGP_NODShiLtJ_G0035356.1 mouse_genomes_project X 4690058 4696770 - Dynlt3 protein_coding processed_transcript MGP_NODShiLtJ_T0095162.1 MGP_NODShiLtJ_G0035356.1 mouse_genomes_project X 4690120 4691140 - Dynlt3 protein_coding processed_transcript MGP_NODShiLtJ_T0102243.1 MGP_NODShiLtJ_G0040409.1 mouse_genomes_project X 55541655 55854447 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0096244.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 86784130 87389630 + protein_coding retained_intron MGP_NODShiLtJ_T0096245.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 86784163 89517485 + MGP_NODShiLtJ_P0096245 protein_coding protein_coding MGP_NODShiLtJ_T0096246.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 86875388 87690218 + protein_coding retained_intron MGP_NODShiLtJ_T0096248.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 87932147 87932753 + protein_coding processed_transcript MGP_NODShiLtJ_T0096249.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 88111447 88380811 + protein_coding processed_transcript MGP_NODShiLtJ_T0096250.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 88754673 89434668 + protein_coding retained_intron MGP_NODShiLtJ_T0096251.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 88976154 89248712 + protein_coding retained_intron MGP_NODShiLtJ_T0096252.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 89326332 89333635 + protein_coding retained_intron MGP_NODShiLtJ_T0096253.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 89326356 89430418 + protein_coding retained_intron MGP_NODShiLtJ_T0096254.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 89326359 89434666 + protein_coding retained_intron MGP_NODShiLtJ_T0096255.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 89326450 89515421 + MGP_NODShiLtJ_P0096255 protein_coding protein_coding MGP_NODShiLtJ_T0096256.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 89326450 89513178 + MGP_NODShiLtJ_P0096256 protein_coding protein_coding MGP_NODShiLtJ_T0096257.1 MGP_NODShiLtJ_G0035667.1 mouse_genomes_project X 89472448 89513517 + protein_coding processed_transcript MGP_NODShiLtJ_T0016258.1 MGP_NODShiLtJ_G0014366.1 mouse_genomes_project X 63847794 63849623 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095706.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59068068 59175258 - MGP_NODShiLtJ_P0095706 Fgf13 protein_coding protein_coding MGP_NODShiLtJ_T0095707.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59068068 59596398 - MGP_NODShiLtJ_P0095707 Fgf13 protein_coding protein_coding MGP_NODShiLtJ_T0095708.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59068068 59143629 - MGP_NODShiLtJ_P0095708 Fgf13 protein_coding protein_coding MGP_NODShiLtJ_T0095709.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59069397 59142408 - Fgf13 protein_coding processed_transcript MGP_NODShiLtJ_T0095710.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59141070 59142356 - Fgf13 protein_coding processed_transcript MGP_NODShiLtJ_T0095711.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59141073 59595799 - MGP_NODShiLtJ_P0095711 Fgf13 protein_coding protein_coding MGP_NODShiLtJ_T0095712.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59262056 59596398 - MGP_NODShiLtJ_P0095712 Fgf13 protein_coding protein_coding MGP_NODShiLtJ_T0095713.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59262133 59596148 - MGP_NODShiLtJ_P0095713 Fgf13 protein_coding protein_coding MGP_NODShiLtJ_T0095714.1 MGP_NODShiLtJ_G0035540.1 mouse_genomes_project X 59595140 59596375 - Fgf13 protein_coding retained_intron MGP_NODShiLtJ_T0016185.1 MGP_NODShiLtJ_G0014293.1 mouse_genomes_project X 44680384 44681917 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016137.1 MGP_NODShiLtJ_G0014245.1 mouse_genomes_project X 18843946 18844421 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016737.1 MGP_NODShiLtJ_G0014845.1 mouse_genomes_project X 173935924 173940665 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095763.1 MGP_NODShiLtJ_G0035563.1 mouse_genomes_project X 72366730 72395059 - MGP_NODShiLtJ_P0095763 Ids protein_coding protein_coding MGP_NODShiLtJ_T0095764.1 MGP_NODShiLtJ_G0035563.1 mouse_genomes_project X 72375461 72391065 - MGP_NODShiLtJ_P0095764 Ids protein_coding protein_coding MGP_NODShiLtJ_T0016381.1 MGP_NODShiLtJ_G0014489.1 mouse_genomes_project X 96975439 96978316 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018438.1 MGP_NODShiLtJ_G0015634.1 mouse_genomes_project X 2168874 2178239 - 2010204K13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018439.1 MGP_NODShiLtJ_G0015634.1 mouse_genomes_project X 2169144 2169883 - 2010204K13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018440.1 MGP_NODShiLtJ_G0015634.1 mouse_genomes_project X 2169160 2180143 - 2010204K13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018441.1 MGP_NODShiLtJ_G0015634.1 mouse_genomes_project X 2169163 2206372 - 2010204K13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0100951.1 MGP_NODShiLtJ_G0039345.1 mouse_genomes_project X 77775165 77775283 + Gm25520 snoRNA snoRNA MGP_NODShiLtJ_T0009297.1 MGP_NODShiLtJ_G0007457.1 mouse_genomes_project X 35655664 35682822 - Gm14565 lincRNA lincRNA MGP_NODShiLtJ_T0095255.1 MGP_NODShiLtJ_G0035386.1 mouse_genomes_project X 16240421 16280395 + MGP_NODShiLtJ_P0095255 Chst7 protein_coding protein_coding MGP_NODShiLtJ_T0097112.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158165923 158232218 + MGP_NODShiLtJ_P0097112 Alg13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097113.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158165926 158171793 + MGP_NODShiLtJ_P0097113 Alg13 protein_coding protein_coding MGP_NODShiLtJ_T0097114.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158165926 158191740 + MGP_NODShiLtJ_P0097114 Alg13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097115.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158165941 158232218 + MGP_NODShiLtJ_P0097115 Alg13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097116.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158165946 158171664 + Alg13 protein_coding processed_transcript MGP_NODShiLtJ_T0097117.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158165946 158232223 + MGP_NODShiLtJ_P0097117 Alg13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097118.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158165964 158171773 + MGP_NODShiLtJ_P0097118 Alg13 protein_coding protein_coding MGP_NODShiLtJ_T0097119.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158187887 158191007 + Alg13 protein_coding processed_transcript MGP_NODShiLtJ_T0097120.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158188147 158232221 + MGP_NODShiLtJ_P0097120 Alg13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097121.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158188512 158195368 + Alg13 protein_coding retained_intron MGP_NODShiLtJ_T0097122.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158191010 158232223 + Alg13 protein_coding processed_transcript MGP_NODShiLtJ_T0097123.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158192441 158198593 + Alg13 protein_coding retained_intron MGP_NODShiLtJ_T0097124.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158199675 158232223 + Alg13 protein_coding processed_transcript MGP_NODShiLtJ_T0097125.1 MGP_NODShiLtJ_G0035939.1 mouse_genomes_project X 158209986 158226790 + Alg13 protein_coding processed_transcript MGP_NODShiLtJ_T0095612.1 MGP_NODShiLtJ_G0035502.1 mouse_genomes_project X 50946366 50995246 - MGP_NODShiLtJ_P0095612 Usp26 protein_coding protein_coding MGP_NODShiLtJ_T0095613.1 MGP_NODShiLtJ_G0035502.1 mouse_genomes_project X 50946366 50995157 - MGP_NODShiLtJ_P0095613 Usp26 protein_coding protein_coding MGP_NODShiLtJ_T0016276.1 MGP_NODShiLtJ_G0014384.1 mouse_genomes_project X 69987515 69988128 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097010.1 MGP_NODShiLtJ_G0035908.1 mouse_genomes_project X 153097581 153098578 - MGP_NODShiLtJ_P0097010 Gm15013 protein_coding protein_coding MGP_NODShiLtJ_T0097011.1 MGP_NODShiLtJ_G0035908.1 mouse_genomes_project X 153097663 153098464 - Gm15013 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0005506.1 MGP_NODShiLtJ_G0004639.1 mouse_genomes_project X 2419770 2426992 - Gm14703 antisense antisense MGP_NODShiLtJ_T0016718.1 MGP_NODShiLtJ_G0014826.1 mouse_genomes_project X 170379171 170379873 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102256.1 MGP_NODShiLtJ_G0040422.1 mouse_genomes_project X 90847803 90848829 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102242.1 MGP_NODShiLtJ_G0040408.1 mouse_genomes_project X 55493727 55520272 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101229.1 MGP_NODShiLtJ_G0039524.1 mouse_genomes_project X 94289114 94289557 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101230.1 MGP_NODShiLtJ_G0039524.1 mouse_genomes_project X 94289167 94289374 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0016549.1 MGP_NODShiLtJ_G0014657.1 mouse_genomes_project X 127183751 127184844 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096615.1 MGP_NODShiLtJ_G0035775.1 mouse_genomes_project X 113186787 113187655 + MGP_NODShiLtJ_P0096615 Cypt2 protein_coding protein_coding MGP_NODShiLtJ_T0005537.1 MGP_NODShiLtJ_G0004663.1 mouse_genomes_project X 102710182 102713893 + F630028O10Rik antisense antisense MGP_NODShiLtJ_T0005538.1 MGP_NODShiLtJ_G0004663.1 mouse_genomes_project X 102710222 102713893 + F630028O10Rik antisense antisense MGP_NODShiLtJ_T0016494.1 MGP_NODShiLtJ_G0014602.1 mouse_genomes_project X 114499274 114499781 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011651.1 MGP_NODShiLtJ_G0009784.1 mouse_genomes_project X 92988734 92989018 - Gm24812 misc_RNA misc_RNA MGP_NODShiLtJ_T0097576.1 MGP_NODShiLtJ_G0036047.1 mouse_genomes_project X 183971457 184011425 - MGP_NODShiLtJ_P0097576 Prps2 protein_coding protein_coding MGP_NODShiLtJ_T0097577.1 MGP_NODShiLtJ_G0036047.1 mouse_genomes_project X 183999116 184011386 - Prps2 protein_coding processed_transcript MGP_NODShiLtJ_T0016163.1 MGP_NODShiLtJ_G0014271.1 mouse_genomes_project X 38009100 38009379 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097551.1 MGP_NODShiLtJ_G0036040.1 mouse_genomes_project X 183022964 183037128 + MGP_NODShiLtJ_P0097551 Trappc2 protein_coding protein_coding MGP_NODShiLtJ_T0097552.1 MGP_NODShiLtJ_G0036040.1 mouse_genomes_project X 183023166 183035965 + Trappc2 protein_coding retained_intron MGP_NODShiLtJ_T0097553.1 MGP_NODShiLtJ_G0036040.1 mouse_genomes_project X 183023166 183037126 + MGP_NODShiLtJ_P0097553 Trappc2 protein_coding protein_coding MGP_NODShiLtJ_T0097554.1 MGP_NODShiLtJ_G0036040.1 mouse_genomes_project X 183027693 183037128 + MGP_NODShiLtJ_P0097554 Trappc2 protein_coding protein_coding MGP_NODShiLtJ_T0016302.1 MGP_NODShiLtJ_G0014410.1 mouse_genomes_project X 77044515 77044986 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100961.1 MGP_NODShiLtJ_G0039355.1 mouse_genomes_project X 111588318 111588456 - Gm22266 snoRNA snoRNA MGP_NODShiLtJ_T0102260.1 MGP_NODShiLtJ_G0040426.1 mouse_genomes_project X 97409171 97410090 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011665.1 MGP_NODShiLtJ_G0009798.1 mouse_genomes_project X 145745052 145745389 - Gm22552 misc_RNA misc_RNA MGP_NODShiLtJ_T0094955.1 MGP_NODShiLtJ_G0035304.1 mouse_genomes_project X 1881835 1917887 - MGP_NODShiLtJ_P0094955 Clcn5 protein_coding protein_coding MGP_NODShiLtJ_T0094956.1 MGP_NODShiLtJ_G0035304.1 mouse_genomes_project X 1887497 2063101 - MGP_NODShiLtJ_P0094956 Clcn5 protein_coding protein_coding MGP_NODShiLtJ_T0094957.1 MGP_NODShiLtJ_G0035304.1 mouse_genomes_project X 1888205 1917846 - Clcn5 protein_coding retained_intron MGP_NODShiLtJ_T0094958.1 MGP_NODShiLtJ_G0035304.1 mouse_genomes_project X 1899228 2063226 - MGP_NODShiLtJ_P0094958 Clcn5 protein_coding protein_coding MGP_NODShiLtJ_T0094959.1 MGP_NODShiLtJ_G0035304.1 mouse_genomes_project X 1945143 2063038 - Clcn5 protein_coding processed_transcript MGP_NODShiLtJ_T0016301.1 MGP_NODShiLtJ_G0014409.1 mouse_genomes_project X 77044452 77045037 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100962.1 MGP_NODShiLtJ_G0039356.1 mouse_genomes_project X 112234953 112235060 + Gm22430 snoRNA snoRNA MGP_NODShiLtJ_T0094950.1 MGP_NODShiLtJ_G0035302.1 mouse_genomes_project X 1694984 1753588 - MGP_NODShiLtJ_P0094950 Ccnb3 protein_coding protein_coding MGP_NODShiLtJ_T0094951.1 MGP_NODShiLtJ_G0035302.1 mouse_genomes_project X 1694984 1765251 - MGP_NODShiLtJ_P0094951 Ccnb3 protein_coding protein_coding MGP_NODShiLtJ_T0099653.1 MGP_NODShiLtJ_G0038047.1 mouse_genomes_project X 9802939 9803130 - Gm25202 snRNA snRNA MGP_NODShiLtJ_T0096426.1 MGP_NODShiLtJ_G0035720.1 mouse_genomes_project X 107480527 107502519 + MGP_NODShiLtJ_P0096426 Igbp1 protein_coding protein_coding MGP_NODShiLtJ_T0096427.1 MGP_NODShiLtJ_G0035720.1 mouse_genomes_project X 107480591 107485639 + Igbp1 protein_coding retained_intron MGP_NODShiLtJ_T0102259.1 MGP_NODShiLtJ_G0040425.1 mouse_genomes_project X 94616840 94617894 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095830.1 MGP_NODShiLtJ_G0035582.1 mouse_genomes_project X 75147549 75164975 + MGP_NODShiLtJ_P0095830 Gabrq protein_coding protein_coding MGP_NODShiLtJ_T0095831.1 MGP_NODShiLtJ_G0035582.1 mouse_genomes_project X 75147807 75160916 + MGP_NODShiLtJ_P0095831 Gabrq protein_coding protein_coding MGP_NODShiLtJ_T0016487.1 MGP_NODShiLtJ_G0014595.1 mouse_genomes_project X 113370233 113370425 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095832.1 MGP_NODShiLtJ_G0035583.1 mouse_genomes_project X 75246537 75249690 - MGP_NODShiLtJ_P0095832 Cetn2 protein_coding protein_coding MGP_NODShiLtJ_T0095833.1 MGP_NODShiLtJ_G0035583.1 mouse_genomes_project X 75247037 75251149 - MGP_NODShiLtJ_P0095833 Cetn2 protein_coding protein_coding MGP_NODShiLtJ_T0095834.1 MGP_NODShiLtJ_G0035583.1 mouse_genomes_project X 75247741 75251117 - MGP_NODShiLtJ_P0095834 Cetn2 protein_coding protein_coding MGP_NODShiLtJ_T0011039.1 MGP_NODShiLtJ_G0009172.1 mouse_genomes_project X 52367556 52367654 - Mir351 miRNA miRNA MGP_NODShiLtJ_T0096493.1 MGP_NODShiLtJ_G0035737.1 mouse_genomes_project X 108373327 108394429 + MGP_NODShiLtJ_P0096493 Nlgn3 protein_coding protein_coding MGP_NODShiLtJ_T0096494.1 MGP_NODShiLtJ_G0035737.1 mouse_genomes_project X 108373340 108392842 + MGP_NODShiLtJ_P0096494 Nlgn3 protein_coding protein_coding MGP_NODShiLtJ_T0096495.1 MGP_NODShiLtJ_G0035737.1 mouse_genomes_project X 108373359 108401460 + MGP_NODShiLtJ_P0096495 Nlgn3 protein_coding protein_coding MGP_NODShiLtJ_T0096496.1 MGP_NODShiLtJ_G0035737.1 mouse_genomes_project X 108374639 108376240 + Nlgn3 protein_coding processed_transcript MGP_NODShiLtJ_T0096497.1 MGP_NODShiLtJ_G0035737.1 mouse_genomes_project X 108388562 108392318 + Nlgn3 protein_coding processed_transcript MGP_NODShiLtJ_T0099671.1 MGP_NODShiLtJ_G0038065.1 mouse_genomes_project X 56507169 56507334 + Gm26312 snRNA snRNA MGP_NODShiLtJ_T0016263.1 MGP_NODShiLtJ_G0014371.1 mouse_genomes_project X 65930165 65931068 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095402.1 MGP_NODShiLtJ_G0035439.1 mouse_genomes_project X 34546127 34588482 - MGP_NODShiLtJ_P0095402 protein_coding protein_coding MGP_NODShiLtJ_T0016674.1 MGP_NODShiLtJ_G0014782.1 mouse_genomes_project X 158771263 158771864 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016119.1 MGP_NODShiLtJ_G0014227.1 mouse_genomes_project X 15043937 15044554 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096872.1 MGP_NODShiLtJ_G0035860.1 mouse_genomes_project X 148015423 148024947 + MGP_NODShiLtJ_P0096872 protein_coding protein_coding MGP_NODShiLtJ_T0011063.1 MGP_NODShiLtJ_G0009196.1 mouse_genomes_project X 68155697 68155760 - Mir465d miRNA miRNA MGP_NODShiLtJ_T0095099.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2964818 2974381 - MGP_NODShiLtJ_P0095099 Wdr13 protein_coding protein_coding MGP_NODShiLtJ_T0095100.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2964820 2974431 - MGP_NODShiLtJ_P0095100 Wdr13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095101.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2964841 2974343 - MGP_NODShiLtJ_P0095101 Wdr13 protein_coding protein_coding MGP_NODShiLtJ_T0095102.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2966821 2974396 - MGP_NODShiLtJ_P0095102 Wdr13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095103.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2966925 2974393 - MGP_NODShiLtJ_P0095103 Wdr13 protein_coding protein_coding MGP_NODShiLtJ_T0095104.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2967218 2970092 - Wdr13 protein_coding retained_intron MGP_NODShiLtJ_T0095105.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2969608 2974392 - Wdr13 protein_coding processed_transcript MGP_NODShiLtJ_T0095106.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2970715 2974418 - MGP_NODShiLtJ_P0095106 Wdr13 protein_coding protein_coding MGP_NODShiLtJ_T0095107.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2971292 2974086 - Wdr13 protein_coding retained_intron MGP_NODShiLtJ_T0095108.1 MGP_NODShiLtJ_G0035336.1 mouse_genomes_project X 2973691 2974465 - Wdr13 protein_coding processed_transcript MGP_NODShiLtJ_T0101228.1 MGP_NODShiLtJ_G0039523.1 mouse_genomes_project X 76772709 76773038 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0094973.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2374825 2402892 + MGP_NODShiLtJ_P0094973 Cacna1f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094974.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2374840 2385843 + Cacna1f protein_coding retained_intron MGP_NODShiLtJ_T0094975.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2374841 2402895 + MGP_NODShiLtJ_P0094975 Cacna1f protein_coding protein_coding MGP_NODShiLtJ_T0094976.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2374862 2386857 + MGP_NODShiLtJ_P0094976 Cacna1f protein_coding protein_coding MGP_NODShiLtJ_T0094977.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2374871 2402895 + MGP_NODShiLtJ_P0094977 Cacna1f protein_coding protein_coding MGP_NODShiLtJ_T0094978.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2374886 2402893 + Cacna1f protein_coding retained_intron MGP_NODShiLtJ_T0094979.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2393941 2395651 + Cacna1f protein_coding retained_intron MGP_NODShiLtJ_T0094980.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2394904 2398203 + MGP_NODShiLtJ_P0094980 Cacna1f protein_coding protein_coding MGP_NODShiLtJ_T0094981.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2394904 2397950 + MGP_NODShiLtJ_P0094981 Cacna1f protein_coding protein_coding MGP_NODShiLtJ_T0094982.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2395898 2397466 + Cacna1f protein_coding retained_intron MGP_NODShiLtJ_T0094983.1 MGP_NODShiLtJ_G0035309.1 mouse_genomes_project X 2398979 2400688 + Cacna1f protein_coding retained_intron MGP_NODShiLtJ_T0018478.1 MGP_NODShiLtJ_G0015648.1 mouse_genomes_project X 107738592 107743605 - Gm14866 processed_transcript processed_transcript MGP_NODShiLtJ_T0095630.1 MGP_NODShiLtJ_G0035511.1 mouse_genomes_project X 52602713 52635691 + MGP_NODShiLtJ_P0095630 Fam122c protein_coding protein_coding MGP_NODShiLtJ_T0095631.1 MGP_NODShiLtJ_G0035511.1 mouse_genomes_project X 52602713 52667212 + MGP_NODShiLtJ_P0095631 Fam122c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095632.1 MGP_NODShiLtJ_G0035511.1 mouse_genomes_project X 52602722 52667212 + MGP_NODShiLtJ_P0095632 Fam122c protein_coding protein_coding MGP_NODShiLtJ_T0101236.1 MGP_NODShiLtJ_G0039528.1 mouse_genomes_project X 115575426 115576645 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101237.1 MGP_NODShiLtJ_G0039528.1 mouse_genomes_project X 115575435 115576590 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0096045.1 MGP_NODShiLtJ_G0035622.1 mouse_genomes_project X 76792999 76801525 - MGP_NODShiLtJ_P0096045 Dnase1l1 protein_coding protein_coding MGP_NODShiLtJ_T0096046.1 MGP_NODShiLtJ_G0035622.1 mouse_genomes_project X 76793000 76802126 - MGP_NODShiLtJ_P0096046 Dnase1l1 protein_coding protein_coding MGP_NODShiLtJ_T0096047.1 MGP_NODShiLtJ_G0035622.1 mouse_genomes_project X 76793101 76801387 - MGP_NODShiLtJ_P0096047 Dnase1l1 protein_coding protein_coding MGP_NODShiLtJ_T0096048.1 MGP_NODShiLtJ_G0035622.1 mouse_genomes_project X 76793755 76801464 - MGP_NODShiLtJ_P0096048 Dnase1l1 protein_coding protein_coding MGP_NODShiLtJ_T0096049.1 MGP_NODShiLtJ_G0035622.1 mouse_genomes_project X 76794150 76796615 - Dnase1l1 protein_coding retained_intron MGP_NODShiLtJ_T0096050.1 MGP_NODShiLtJ_G0035622.1 mouse_genomes_project X 76796553 76801415 - Dnase1l1 protein_coding retained_intron MGP_NODShiLtJ_T0016323.1 MGP_NODShiLtJ_G0014431.1 mouse_genomes_project X 80641505 80642699 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096603.1 MGP_NODShiLtJ_G0035768.1 mouse_genomes_project X 111595743 111737077 - MGP_NODShiLtJ_P0096603 C77370 protein_coding protein_coding MGP_NODShiLtJ_T0096604.1 MGP_NODShiLtJ_G0035768.1 mouse_genomes_project X 111595744 111737009 - MGP_NODShiLtJ_P0096604 C77370 protein_coding protein_coding MGP_NODShiLtJ_T0096605.1 MGP_NODShiLtJ_G0035768.1 mouse_genomes_project X 111603887 111737036 - MGP_NODShiLtJ_P0096605 C77370 protein_coding protein_coding MGP_NODShiLtJ_T0016399.1 MGP_NODShiLtJ_G0014507.1 mouse_genomes_project X 100501691 100502592 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102233.1 MGP_NODShiLtJ_G0040399.1 mouse_genomes_project X 3748868 3748981 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0095336.1 MGP_NODShiLtJ_G0035409.1 mouse_genomes_project X 18210180 18211838 - MGP_NODShiLtJ_P0095336 Gm28269 protein_coding protein_coding MGP_NODShiLtJ_T0097324.1 MGP_NODShiLtJ_G0035980.1 mouse_genomes_project X 169402238 169407533 - MGP_NODShiLtJ_P0097324 4930524N10Rik protein_coding protein_coding MGP_NODShiLtJ_T0096751.1 MGP_NODShiLtJ_G0035820.1 mouse_genomes_project X 126305630 126305978 + MGP_NODShiLtJ_P0096751 H2afb2 protein_coding protein_coding MGP_NODShiLtJ_T0016726.1 MGP_NODShiLtJ_G0014834.1 mouse_genomes_project X 172562660 172563962 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094990.1 MGP_NODShiLtJ_G0035311.1 mouse_genomes_project X 2427192 2437897 + MGP_NODShiLtJ_P0094990 Prickle3 protein_coding protein_coding MGP_NODShiLtJ_T0094991.1 MGP_NODShiLtJ_G0035311.1 mouse_genomes_project X 2427205 2430864 + Prickle3 protein_coding retained_intron MGP_NODShiLtJ_T0094992.1 MGP_NODShiLtJ_G0035311.1 mouse_genomes_project X 2432490 2437631 + Prickle3 protein_coding retained_intron MGP_NODShiLtJ_T0094993.1 MGP_NODShiLtJ_G0035311.1 mouse_genomes_project X 2435795 2436835 + Prickle3 protein_coding retained_intron MGP_NODShiLtJ_T0096479.1 MGP_NODShiLtJ_G0035734.1 mouse_genomes_project X 108333462 108341054 - MGP_NODShiLtJ_P0096479 Gm20489 protein_coding protein_coding MGP_NODShiLtJ_T0095071.1 MGP_NODShiLtJ_G0035326.1 mouse_genomes_project X 2700170 2710389 + MGP_NODShiLtJ_P0095071 Timm17b protein_coding protein_coding MGP_NODShiLtJ_T0095072.1 MGP_NODShiLtJ_G0035326.1 mouse_genomes_project X 2700484 2708360 + MGP_NODShiLtJ_P0095072 Timm17b protein_coding protein_coding MGP_NODShiLtJ_T0095073.1 MGP_NODShiLtJ_G0035326.1 mouse_genomes_project X 2708143 2709000 + Timm17b protein_coding retained_intron MGP_NODShiLtJ_T0099696.1 MGP_NODShiLtJ_G0038090.1 mouse_genomes_project X 114517521 114517628 - Gm24491 snRNA snRNA MGP_NODShiLtJ_T0098128.1 MGP_NODShiLtJ_G0036540.1 mouse_genomes_project X 87223956 87224073 + n-R5s9 rRNA rRNA MGP_NODShiLtJ_T0011671.1 MGP_NODShiLtJ_G0009804.1 mouse_genomes_project X 158741781 158742103 + Gm26024 misc_RNA misc_RNA MGP_NODShiLtJ_T0016305.1 MGP_NODShiLtJ_G0014413.1 mouse_genomes_project X 77373849 77374233 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016065.1 MGP_NODShiLtJ_G0014173.1 mouse_genomes_project X 2301112 2301675 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102276.1 MGP_NODShiLtJ_G0040442.1 mouse_genomes_project X 147874200 147877562 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0096351.1 MGP_NODShiLtJ_G0035698.1 mouse_genomes_project X 101797501 101818397 - MGP_NODShiLtJ_P0096351 Amer1 protein_coding protein_coding MGP_NODShiLtJ_T0098165.1 MGP_NODShiLtJ_G0036577.1 mouse_genomes_project X 167726327 167726568 + Gm24687 ribozyme ribozyme MGP_NODShiLtJ_T0016195.1 MGP_NODShiLtJ_G0014303.1 mouse_genomes_project X 48533756 48534015 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102237.1 MGP_NODShiLtJ_G0040403.1 mouse_genomes_project X 34622206 34622717 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016382.1 MGP_NODShiLtJ_G0014490.1 mouse_genomes_project X 97005754 97006778 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096153.1 MGP_NODShiLtJ_G0035635.1 mouse_genomes_project X 77160875 77161823 + MGP_NODShiLtJ_P0096153 Olfr1325 protein_coding protein_coding MGP_NODShiLtJ_T0102254.1 MGP_NODShiLtJ_G0040420.1 mouse_genomes_project X 81033929 81040902 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0097226.1 MGP_NODShiLtJ_G0035957.1 mouse_genomes_project X 165974266 166129971 + Fam120c protein_coding retained_intron MGP_NODShiLtJ_T0097227.1 MGP_NODShiLtJ_G0035957.1 mouse_genomes_project X 165974266 166129971 + MGP_NODShiLtJ_P0097227 Fam120c protein_coding protein_coding MGP_NODShiLtJ_T0002434.1 MGP_NODShiLtJ_G0002343.1 mouse_genomes_project X 147271273 147272692 - TEC TEC MGP_NODShiLtJ_T0011025.1 MGP_NODShiLtJ_G0009158.1 mouse_genomes_project X 47534053 47534172 + Gm27828 miRNA miRNA MGP_NODShiLtJ_T0097570.1 MGP_NODShiLtJ_G0036046.1 mouse_genomes_project X 183925688 183952546 - MGP_NODShiLtJ_P0097570 Tlr7 protein_coding protein_coding MGP_NODShiLtJ_T0097571.1 MGP_NODShiLtJ_G0036046.1 mouse_genomes_project X 183925690 183952576 - MGP_NODShiLtJ_P0097571 Tlr7 protein_coding protein_coding MGP_NODShiLtJ_T0097572.1 MGP_NODShiLtJ_G0036046.1 mouse_genomes_project X 183925973 183952515 - MGP_NODShiLtJ_P0097572 Tlr7 protein_coding protein_coding MGP_NODShiLtJ_T0097573.1 MGP_NODShiLtJ_G0036046.1 mouse_genomes_project X 183929101 183952509 - MGP_NODShiLtJ_P0097573 Tlr7 protein_coding protein_coding MGP_NODShiLtJ_T0097574.1 MGP_NODShiLtJ_G0036046.1 mouse_genomes_project X 183929115 183952528 - MGP_NODShiLtJ_P0097574 Tlr7 protein_coding protein_coding MGP_NODShiLtJ_T0097575.1 MGP_NODShiLtJ_G0036046.1 mouse_genomes_project X 183939690 183952461 - Tlr7 protein_coding processed_transcript MGP_NODShiLtJ_T0095447.1 MGP_NODShiLtJ_G0035457.1 mouse_genomes_project X 35712980 35902488 + MGP_NODShiLtJ_P0095447 6030498E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0095448.1 MGP_NODShiLtJ_G0035457.1 mouse_genomes_project X 35898175 35899647 + MGP_NODShiLtJ_P0095448 6030498E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0096240.1 MGP_NODShiLtJ_G0035665.1 mouse_genomes_project X 84533986 84572571 + Tmem47 protein_coding processed_transcript MGP_NODShiLtJ_T0096241.1 MGP_NODShiLtJ_G0035665.1 mouse_genomes_project X 84533993 84573526 + MGP_NODShiLtJ_P0096241 Tmem47 protein_coding protein_coding MGP_NODShiLtJ_T0096242.1 MGP_NODShiLtJ_G0035665.1 mouse_genomes_project X 84534004 84587985 + MGP_NODShiLtJ_P0096242 Tmem47 protein_coding protein_coding MGP_NODShiLtJ_T0095400.1 MGP_NODShiLtJ_G0035437.1 mouse_genomes_project X 34284823 34335117 + MGP_NODShiLtJ_P0095400 protein_coding protein_coding MGP_NODShiLtJ_T0016686.1 MGP_NODShiLtJ_G0014794.1 mouse_genomes_project X 160854500 160855708 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096763.1 MGP_NODShiLtJ_G0035826.1 mouse_genomes_project X 137814433 137817822 - MGP_NODShiLtJ_P0096763 4932411N23Rik protein_coding protein_coding MGP_NODShiLtJ_T0016780.1 MGP_NODShiLtJ_G0014888.1 mouse_genomes_project X 184069571 184070114 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018518.1 MGP_NODShiLtJ_G0015660.1 mouse_genomes_project X 152562136 152700435 - Platr21 processed_transcript processed_transcript MGP_NODShiLtJ_T0018519.1 MGP_NODShiLtJ_G0015660.1 mouse_genomes_project X 152691155 152701403 - Platr21 processed_transcript processed_transcript MGP_NODShiLtJ_T0100967.1 MGP_NODShiLtJ_G0039361.1 mouse_genomes_project X 132266772 132266908 + Gm23277 snoRNA snoRNA MGP_NODShiLtJ_T0095850.1 MGP_NODShiLtJ_G0035593.1 mouse_genomes_project X 75831035 75848568 + MGP_NODShiLtJ_P0095850 Zfp92 protein_coding protein_coding MGP_NODShiLtJ_T0095851.1 MGP_NODShiLtJ_G0035593.1 mouse_genomes_project X 75831499 75849955 + MGP_NODShiLtJ_P0095851 Zfp92 protein_coding protein_coding MGP_NODShiLtJ_T0097084.1 MGP_NODShiLtJ_G0035932.1 mouse_genomes_project X 156365446 156535447 + MGP_NODShiLtJ_P0097084 Tmem164 protein_coding protein_coding MGP_NODShiLtJ_T0097085.1 MGP_NODShiLtJ_G0035932.1 mouse_genomes_project X 156366963 156468280 + Tmem164 protein_coding retained_intron MGP_NODShiLtJ_T0097086.1 MGP_NODShiLtJ_G0035932.1 mouse_genomes_project X 156467982 156540569 + MGP_NODShiLtJ_P0097086 Tmem164 protein_coding protein_coding MGP_NODShiLtJ_T0018461.1 MGP_NODShiLtJ_G0015642.1 mouse_genomes_project X 51992980 51995011 - Kis2 processed_transcript processed_transcript MGP_NODShiLtJ_T0018462.1 MGP_NODShiLtJ_G0015642.1 mouse_genomes_project X 51992980 51995011 - Kis2 processed_transcript processed_transcript MGP_NODShiLtJ_T0018463.1 MGP_NODShiLtJ_G0015642.1 mouse_genomes_project X 51992980 51995011 - Kis2 processed_transcript processed_transcript MGP_NODShiLtJ_T0018464.1 MGP_NODShiLtJ_G0015642.1 mouse_genomes_project X 51992982 51995378 - Kis2 processed_transcript processed_transcript MGP_NODShiLtJ_T0095410.1 MGP_NODShiLtJ_G0035445.1 mouse_genomes_project X 34874304 34908903 - protein_coding transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0095411.1 MGP_NODShiLtJ_G0035445.1 mouse_genomes_project X 34874304 34908903 - MGP_NODShiLtJ_P0095411 protein_coding protein_coding MGP_NODShiLtJ_T0095412.1 MGP_NODShiLtJ_G0035445.1 mouse_genomes_project X 34874387 34903580 - protein_coding processed_transcript MGP_NODShiLtJ_T0016444.1 MGP_NODShiLtJ_G0014552.1 mouse_genomes_project X 109283746 109284384 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016779.1 MGP_NODShiLtJ_G0014887.1 mouse_genomes_project X 183640664 183641199 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096286.1 MGP_NODShiLtJ_G0035684.1 mouse_genomes_project X 99325394 99327332 + Arx protein_coding retained_intron MGP_NODShiLtJ_T0096287.1 MGP_NODShiLtJ_G0035684.1 mouse_genomes_project X 99325445 99338313 + MGP_NODShiLtJ_P0096287 Arx protein_coding protein_coding MGP_NODShiLtJ_T0096288.1 MGP_NODShiLtJ_G0035684.1 mouse_genomes_project X 99325459 99338018 + MGP_NODShiLtJ_P0096288 Arx protein_coding protein_coding MGP_NODShiLtJ_T0099714.1 MGP_NODShiLtJ_G0038108.1 mouse_genomes_project X 166027351 166027501 + Gm22248 snRNA snRNA MGP_NODShiLtJ_T0099698.1 MGP_NODShiLtJ_G0038092.1 mouse_genomes_project X 117360142 117360249 - Gm25797 snRNA snRNA MGP_NODShiLtJ_T0016331.1 MGP_NODShiLtJ_G0014439.1 mouse_genomes_project X 81719878 81721456 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097359.1 MGP_NODShiLtJ_G0035992.1 mouse_genomes_project X 173192009 173195725 - MGP_NODShiLtJ_P0097359 Yy2 protein_coding protein_coding MGP_NODShiLtJ_T0096016.1 MGP_NODShiLtJ_G0035618.1 mouse_genomes_project X 76676121 76711096 + MGP_NODShiLtJ_P0096016 Tktl1 protein_coding protein_coding MGP_NODShiLtJ_T0096017.1 MGP_NODShiLtJ_G0035618.1 mouse_genomes_project X 76676152 76697206 + MGP_NODShiLtJ_P0096017 Tktl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0016755.1 MGP_NODShiLtJ_G0014863.1 mouse_genomes_project X 177576156 177577075 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016138.1 MGP_NODShiLtJ_G0014246.1 mouse_genomes_project X 18979256 18979799 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016056.1 MGP_NODShiLtJ_G0014164.1 mouse_genomes_project X 324490 327877 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097142.1 MGP_NODShiLtJ_G0035945.1 mouse_genomes_project X 161847503 161892571 - MGP_NODShiLtJ_P0097142 Il13ra2 protein_coding protein_coding MGP_NODShiLtJ_T0097143.1 MGP_NODShiLtJ_G0035945.1 mouse_genomes_project X 161847505 161868202 - MGP_NODShiLtJ_P0097143 Il13ra2 protein_coding protein_coding MGP_NODShiLtJ_T0016107.1 MGP_NODShiLtJ_G0014215.1 mouse_genomes_project X 10524816 10525693 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099693.1 MGP_NODShiLtJ_G0038087.1 mouse_genomes_project X 113496954 113497137 + Gm26020 snRNA snRNA MGP_NODShiLtJ_T0096463.1 MGP_NODShiLtJ_G0035730.1 mouse_genomes_project X 108135618 108141806 - Slc7a3 protein_coding retained_intron MGP_NODShiLtJ_T0096464.1 MGP_NODShiLtJ_G0035730.1 mouse_genomes_project X 108135629 108141753 - MGP_NODShiLtJ_P0096464 Slc7a3 protein_coding protein_coding MGP_NODShiLtJ_T0096465.1 MGP_NODShiLtJ_G0035730.1 mouse_genomes_project X 108135630 108143150 - MGP_NODShiLtJ_P0096465 Slc7a3 protein_coding protein_coding MGP_NODShiLtJ_T0096466.1 MGP_NODShiLtJ_G0035730.1 mouse_genomes_project X 108135630 108141773 - MGP_NODShiLtJ_P0096466 Slc7a3 protein_coding protein_coding MGP_NODShiLtJ_T0096467.1 MGP_NODShiLtJ_G0035730.1 mouse_genomes_project X 108136214 108140582 - Slc7a3 protein_coding processed_transcript MGP_NODShiLtJ_T0096468.1 MGP_NODShiLtJ_G0035730.1 mouse_genomes_project X 108137978 108138642 - Slc7a3 protein_coding retained_intron MGP_NODShiLtJ_T0096469.1 MGP_NODShiLtJ_G0035730.1 mouse_genomes_project X 108138166 108138868 - Slc7a3 protein_coding retained_intron MGP_NODShiLtJ_T0098138.1 MGP_NODShiLtJ_G0036550.1 mouse_genomes_project X 173272423 173272517 - Gm23381 rRNA rRNA MGP_NODShiLtJ_T0095269.1 MGP_NODShiLtJ_G0035391.1 mouse_genomes_project X 16901220 16903514 - MGP_NODShiLtJ_P0095269 Ndufb11 protein_coding protein_coding MGP_NODShiLtJ_T0011084.1 MGP_NODShiLtJ_G0009217.1 mouse_genomes_project X 109168271 109168375 - Gm27843 miRNA miRNA MGP_NODShiLtJ_T0016766.1 MGP_NODShiLtJ_G0014874.1 mouse_genomes_project X 179592145 179592615 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011661.1 MGP_NODShiLtJ_G0009794.1 mouse_genomes_project X 117455028 117455320 - Gm26415 misc_RNA misc_RNA MGP_NODShiLtJ_T0096917.1 MGP_NODShiLtJ_G0035878.1 mouse_genomes_project X 149067875 149069735 + MGP_NODShiLtJ_P0096917 Wbp5 protein_coding protein_coding MGP_NODShiLtJ_T0096918.1 MGP_NODShiLtJ_G0035878.1 mouse_genomes_project X 149068479 149069735 + MGP_NODShiLtJ_P0096918 Wbp5 protein_coding protein_coding MGP_NODShiLtJ_T0096779.1 MGP_NODShiLtJ_G0035834.1 mouse_genomes_project X 146336572 146343930 - MGP_NODShiLtJ_P0096779 Tspan6 protein_coding protein_coding MGP_NODShiLtJ_T0096780.1 MGP_NODShiLtJ_G0035834.1 mouse_genomes_project X 146338206 146343795 - MGP_NODShiLtJ_P0096780 Tspan6 protein_coding protein_coding MGP_NODShiLtJ_T0096781.1 MGP_NODShiLtJ_G0035834.1 mouse_genomes_project X 146340025 146343795 - MGP_NODShiLtJ_P0096781 Tspan6 protein_coding protein_coding MGP_NODShiLtJ_T0096782.1 MGP_NODShiLtJ_G0035834.1 mouse_genomes_project X 146342222 146343614 - Tspan6 protein_coding processed_transcript MGP_NODShiLtJ_T0095403.1 MGP_NODShiLtJ_G0035440.1 mouse_genomes_project X 34651458 34655493 + MGP_NODShiLtJ_P0095403 Rhox5 protein_coding protein_coding MGP_NODShiLtJ_T0095404.1 MGP_NODShiLtJ_G0035440.1 mouse_genomes_project X 34651467 34655381 + MGP_NODShiLtJ_P0095404 Rhox5 protein_coding protein_coding MGP_NODShiLtJ_T0095395.1 MGP_NODShiLtJ_G0035432.1 mouse_genomes_project X 34040344 34058515 - MGP_NODShiLtJ_P0095395 Akap14 protein_coding protein_coding MGP_NODShiLtJ_T0102266.1 MGP_NODShiLtJ_G0040432.1 mouse_genomes_project X 110064060 110066616 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0096014.1 MGP_NODShiLtJ_G0035617.1 mouse_genomes_project X 76648049 76664305 - MGP_NODShiLtJ_P0096014 Tex28 protein_coding protein_coding MGP_NODShiLtJ_T0096015.1 MGP_NODShiLtJ_G0035617.1 mouse_genomes_project X 76648049 76664305 - MGP_NODShiLtJ_P0096015 Tex28 protein_coding protein_coding MGP_NODShiLtJ_T0096908.1 MGP_NODShiLtJ_G0035874.1 mouse_genomes_project X 148954430 148955878 + MGP_NODShiLtJ_P0096908 protein_coding protein_coding MGP_NODShiLtJ_T0099666.1 MGP_NODShiLtJ_G0038060.1 mouse_genomes_project X 41070503 41070693 + Gm24763 snRNA snRNA MGP_NODShiLtJ_T0011059.1 MGP_NODShiLtJ_G0009192.1 mouse_genomes_project X 68141297 68141378 - Mir465c-1 miRNA miRNA MGP_NODShiLtJ_T0096120.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76909351 76917919 - MGP_NODShiLtJ_P0096120 Fam3a protein_coding protein_coding MGP_NODShiLtJ_T0096121.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76909393 76917750 - MGP_NODShiLtJ_P0096121 Fam3a protein_coding protein_coding MGP_NODShiLtJ_T0096122.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76909393 76917650 - MGP_NODShiLtJ_P0096122 Fam3a protein_coding protein_coding MGP_NODShiLtJ_T0096123.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76909836 76917829 - MGP_NODShiLtJ_P0096123 Fam3a protein_coding protein_coding MGP_NODShiLtJ_T0096124.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76909934 76917750 - MGP_NODShiLtJ_P0096124 Fam3a protein_coding protein_coding MGP_NODShiLtJ_T0096125.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76911054 76917902 - MGP_NODShiLtJ_P0096125 Fam3a protein_coding protein_coding MGP_NODShiLtJ_T0096126.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76911264 76917750 - MGP_NODShiLtJ_P0096126 Fam3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096127.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76911488 76912388 - Fam3a protein_coding retained_intron MGP_NODShiLtJ_T0096128.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76911544 76917397 - MGP_NODShiLtJ_P0096128 Fam3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096129.1 MGP_NODShiLtJ_G0035631.1 mouse_genomes_project X 76911544 76917334 - MGP_NODShiLtJ_P0096129 Fam3a protein_coding protein_coding MGP_NODShiLtJ_T0016286.1 MGP_NODShiLtJ_G0014394.1 mouse_genomes_project X 72628773 72629266 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095743.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70388796 70437861 + MGP_NODShiLtJ_P0095743 Fmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095744.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70388837 70426583 + Fmr1 protein_coding retained_intron MGP_NODShiLtJ_T0095745.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70388837 70390360 + Fmr1 protein_coding processed_transcript MGP_NODShiLtJ_T0095746.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70388879 70437861 + MGP_NODShiLtJ_P0095746 Fmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095747.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70388997 70437861 + MGP_NODShiLtJ_P0095747 Fmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095748.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70389057 70437861 + MGP_NODShiLtJ_P0095748 Fmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095749.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70389057 70437861 + MGP_NODShiLtJ_P0095749 Fmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095750.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70389066 70437861 + MGP_NODShiLtJ_P0095750 Fmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095751.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70412768 70425880 + Fmr1 protein_coding retained_intron MGP_NODShiLtJ_T0095752.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70415596 70416270 + Fmr1 protein_coding retained_intron MGP_NODShiLtJ_T0095753.1 MGP_NODShiLtJ_G0035559.1 mouse_genomes_project X 70430868 70432358 + Fmr1 protein_coding retained_intron MGP_NODShiLtJ_T0096934.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149584148 149592864 - MGP_NODShiLtJ_P0096934 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096935.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149584148 149587113 - MGP_NODShiLtJ_P0096935 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096936.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149584159 149592557 - MGP_NODShiLtJ_P0096936 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096937.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149584159 149587114 - MGP_NODShiLtJ_P0096937 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096938.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149584159 149592557 - MGP_NODShiLtJ_P0096938 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096939.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149584159 149592360 - MGP_NODShiLtJ_P0096939 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096940.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149584159 149594139 - MGP_NODShiLtJ_P0096940 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096941.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149585041 149592554 - MGP_NODShiLtJ_P0096941 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096942.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149585070 149594082 - MGP_NODShiLtJ_P0096942 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096943.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149585160 149592360 - MGP_NODShiLtJ_P0096943 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096944.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149585480 149594110 - MGP_NODShiLtJ_P0096944 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096945.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149585506 149591693 - MGP_NODShiLtJ_P0096945 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096946.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149585508 149594139 - MGP_NODShiLtJ_P0096946 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096947.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149585636 149591689 - MGP_NODShiLtJ_P0096947 Morf4l2 protein_coding protein_coding MGP_NODShiLtJ_T0096948.1 MGP_NODShiLtJ_G0035885.1 mouse_genomes_project X 149586804 149592481 - Morf4l2 protein_coding processed_transcript MGP_NODShiLtJ_T0096956.1 MGP_NODShiLtJ_G0035889.1 mouse_genomes_project X 149797884 149798936 + MGP_NODShiLtJ_P0096956 H2bfm protein_coding protein_coding MGP_NODShiLtJ_T0005518.1 MGP_NODShiLtJ_G0004646.1 mouse_genomes_project X 48289547 48401741 - Gm14697 antisense antisense MGP_NODShiLtJ_T0016109.1 MGP_NODShiLtJ_G0014217.1 mouse_genomes_project X 11180437 11180979 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101223.1 MGP_NODShiLtJ_G0039519.1 mouse_genomes_project X 20077091 20077649 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0016306.1 MGP_NODShiLtJ_G0014414.1 mouse_genomes_project X 77668829 77669845 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095333.1 MGP_NODShiLtJ_G0035407.1 mouse_genomes_project X 17893806 17898427 + MGP_NODShiLtJ_P0095333 Agtr2 protein_coding protein_coding MGP_NODShiLtJ_T0095334.1 MGP_NODShiLtJ_G0035407.1 mouse_genomes_project X 17893984 17895566 + Agtr2 protein_coding processed_transcript MGP_NODShiLtJ_T0016210.1 MGP_NODShiLtJ_G0014318.1 mouse_genomes_project X 52995426 52995986 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097371.1 MGP_NODShiLtJ_G0035994.1 mouse_genomes_project X 173455635 173457570 + MGP_NODShiLtJ_P0097371 Klhl34 protein_coding protein_coding MGP_NODShiLtJ_T0016679.1 MGP_NODShiLtJ_G0014787.1 mouse_genomes_project X 159792308 159792766 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011004.1 MGP_NODShiLtJ_G0009137.1 mouse_genomes_project X 727820 727900 + Gm27360 miRNA miRNA MGP_NODShiLtJ_T0016505.1 MGP_NODShiLtJ_G0014613.1 mouse_genomes_project X 116591523 116593621 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016655.1 MGP_NODShiLtJ_G0014763.1 mouse_genomes_project X 155583427 155585574 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016606.1 MGP_NODShiLtJ_G0014714.1 mouse_genomes_project X 147251694 147255949 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016481.1 MGP_NODShiLtJ_G0014589.1 mouse_genomes_project X 112675369 112676150 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016172.1 MGP_NODShiLtJ_G0014280.1 mouse_genomes_project X 40634664 40635055 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016299.1 MGP_NODShiLtJ_G0014407.1 mouse_genomes_project X 77021383 77022216 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011062.1 MGP_NODShiLtJ_G0009195.1 mouse_genomes_project X 68155690 68155764 - Mir465 miRNA miRNA MGP_NODShiLtJ_T0016568.1 MGP_NODShiLtJ_G0014676.1 mouse_genomes_project X 131376977 131378151 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016445.1 MGP_NODShiLtJ_G0014553.1 mouse_genomes_project X 109362072 109362546 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011036.1 MGP_NODShiLtJ_G0009169.1 mouse_genomes_project X 52362462 52362553 - Mir450-1 miRNA miRNA MGP_NODShiLtJ_T0097262.1 MGP_NODShiLtJ_G0035960.1 mouse_genomes_project X 166709407 166714983 + MGP_NODShiLtJ_P0097262 Hsd17b10 protein_coding protein_coding MGP_NODShiLtJ_T0097263.1 MGP_NODShiLtJ_G0035960.1 mouse_genomes_project X 166709407 166714983 + MGP_NODShiLtJ_P0097263 Hsd17b10 protein_coding protein_coding MGP_NODShiLtJ_T0097264.1 MGP_NODShiLtJ_G0035960.1 mouse_genomes_project X 166709711 166714983 + Hsd17b10 protein_coding processed_transcript MGP_NODShiLtJ_T0097265.1 MGP_NODShiLtJ_G0035960.1 mouse_genomes_project X 166713937 166714983 + Hsd17b10 protein_coding retained_intron MGP_NODShiLtJ_T0097094.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157273816 157588046 + MGP_NODShiLtJ_P0097094 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097095.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157273923 157551223 + MGP_NODShiLtJ_P0097095 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097096.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157438251 157588046 + MGP_NODShiLtJ_P0097096 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097097.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157438334 157469412 + MGP_NODShiLtJ_P0097097 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097098.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157438352 157494976 + MGP_NODShiLtJ_P0097098 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097099.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157438487 157513808 + MGP_NODShiLtJ_P0097099 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097100.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157438540 157588046 + MGP_NODShiLtJ_P0097100 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097101.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157439703 157588046 + MGP_NODShiLtJ_P0097101 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097102.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157439703 157588046 + MGP_NODShiLtJ_P0097102 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0097103.1 MGP_NODShiLtJ_G0035936.1 mouse_genomes_project X 157469313 157588050 + MGP_NODShiLtJ_P0097103 Pak3 protein_coding protein_coding MGP_NODShiLtJ_T0096957.1 MGP_NODShiLtJ_G0035890.1 mouse_genomes_project X 149840838 149852547 - MGP_NODShiLtJ_P0096957 protein_coding protein_coding MGP_NODShiLtJ_T0016264.1 MGP_NODShiLtJ_G0014372.1 mouse_genomes_project X 66080623 66080873 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096484.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108347451 108371649 + MGP_NODShiLtJ_P0096484 Med12 protein_coding protein_coding MGP_NODShiLtJ_T0096485.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108347650 108371649 + MGP_NODShiLtJ_P0096485 Med12 protein_coding protein_coding MGP_NODShiLtJ_T0096486.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108347681 108371649 + MGP_NODShiLtJ_P0096486 Med12 protein_coding protein_coding MGP_NODShiLtJ_T0096487.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108347681 108371649 + MGP_NODShiLtJ_P0096487 Med12 protein_coding protein_coding MGP_NODShiLtJ_T0096488.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108356879 108358341 + Med12 protein_coding retained_intron MGP_NODShiLtJ_T0096489.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108357369 108358112 + Med12 protein_coding processed_transcript MGP_NODShiLtJ_T0096490.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108360207 108371649 + Med12 protein_coding retained_intron MGP_NODShiLtJ_T0096491.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108367317 108370251 + Med12 protein_coding processed_transcript MGP_NODShiLtJ_T0096492.1 MGP_NODShiLtJ_G0035736.1 mouse_genomes_project X 108370752 108371571 + Med12 protein_coding processed_transcript MGP_NODShiLtJ_T0009316.1 MGP_NODShiLtJ_G0007471.1 mouse_genomes_project X 99186212 99186932 + BC061195 lincRNA lincRNA MGP_NODShiLtJ_T0095571.1 MGP_NODShiLtJ_G0035488.1 mouse_genomes_project X 47914895 48118418 - MGP_NODShiLtJ_P0095571 Enox2 protein_coding protein_coding MGP_NODShiLtJ_T0095572.1 MGP_NODShiLtJ_G0035488.1 mouse_genomes_project X 47972519 48244889 - Enox2 protein_coding processed_transcript MGP_NODShiLtJ_T0095573.1 MGP_NODShiLtJ_G0035488.1 mouse_genomes_project X 47975736 48244842 - Enox2 protein_coding processed_transcript MGP_NODShiLtJ_T0095574.1 MGP_NODShiLtJ_G0035488.1 mouse_genomes_project X 47980033 48244872 - Enox2 protein_coding processed_transcript MGP_NODShiLtJ_T0011649.1 MGP_NODShiLtJ_G0009782.1 mouse_genomes_project X 70388740 70388868 + Gm27838 misc_RNA misc_RNA MGP_NODShiLtJ_T0018482.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112679980 112716292 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018483.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112681591 112716242 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018484.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112681600 112716238 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018485.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112683639 112716320 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018486.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112684186 112716320 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018487.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112685444 112716283 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018488.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112686056 112716239 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018489.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112686588 112716251 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018490.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112686786 112716231 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018491.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112686861 112716304 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018492.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112709042 112716300 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018493.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112714060 112716290 - 5530601H04Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018494.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112715307 112727057 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018495.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112721991 112722757 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018496.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112722211 112727254 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018497.1 MGP_NODShiLtJ_G0015651.1 mouse_genomes_project X 112724224 112727081 - 5530601H04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016772.1 MGP_NODShiLtJ_G0014880.1 mouse_genomes_project X 182259350 182259729 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016668.1 MGP_NODShiLtJ_G0014776.1 mouse_genomes_project X 158061577 158062400 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095590.1 MGP_NODShiLtJ_G0035494.1 mouse_genomes_project X 49029164 49030094 - MGP_NODShiLtJ_P0095590 Olfr1323 protein_coding protein_coding MGP_NODShiLtJ_T0099675.1 MGP_NODShiLtJ_G0038069.1 mouse_genomes_project X 59199923 59200017 + Gm26487 snRNA snRNA MGP_NODShiLtJ_T0096258.1 MGP_NODShiLtJ_G0035669.1 mouse_genomes_project X 89564821 89588899 + MGP_NODShiLtJ_P0096258 Fthl17a protein_coding protein_coding MGP_NODShiLtJ_T0101238.1 MGP_NODShiLtJ_G0039529.1 mouse_genomes_project X 139678455 139679097 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0097087.1 MGP_NODShiLtJ_G0035933.1 mouse_genomes_project X 156550396 156670990 - MGP_NODShiLtJ_P0097087 Ammecr1 protein_coding protein_coding MGP_NODShiLtJ_T0095015.1 MGP_NODShiLtJ_G0035317.1 mouse_genomes_project X 2503379 2520367 + MGP_NODShiLtJ_P0095015 Praf2 protein_coding protein_coding MGP_NODShiLtJ_T0095535.1 MGP_NODShiLtJ_G0035478.1 mouse_genomes_project X 47102541 47148446 + MGP_NODShiLtJ_P0095535 Utp14a protein_coding protein_coding MGP_NODShiLtJ_T0095536.1 MGP_NODShiLtJ_G0035478.1 mouse_genomes_project X 47102576 47115724 + Utp14a protein_coding processed_transcript MGP_NODShiLtJ_T0095537.1 MGP_NODShiLtJ_G0035478.1 mouse_genomes_project X 47102597 47128054 + Utp14a protein_coding processed_transcript MGP_NODShiLtJ_T0095538.1 MGP_NODShiLtJ_G0035478.1 mouse_genomes_project X 47102622 47148445 + MGP_NODShiLtJ_P0095538 Utp14a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095507.1 MGP_NODShiLtJ_G0035471.1 mouse_genomes_project X 44912889 44914228 + MGP_NODShiLtJ_P0095507 Actrt1 protein_coding protein_coding MGP_NODShiLtJ_T0095491.1 MGP_NODShiLtJ_G0035464.1 mouse_genomes_project X 40163754 40165588 + MGP_NODShiLtJ_P0095491 Gm43337 protein_coding protein_coding MGP_NODShiLtJ_T0100936.1 MGP_NODShiLtJ_G0039330.1 mouse_genomes_project X 33636155 33636242 + Gm23613 snoRNA snoRNA MGP_NODShiLtJ_T0016701.1 MGP_NODShiLtJ_G0014809.1 mouse_genomes_project X 166435799 166435976 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016139.1 MGP_NODShiLtJ_G0014247.1 mouse_genomes_project X 18986436 18986920 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100964.1 MGP_NODShiLtJ_G0039358.1 mouse_genomes_project X 126392818 126392933 + Gm24438 snoRNA snoRNA MGP_NODShiLtJ_T0016545.1 MGP_NODShiLtJ_G0014653.1 mouse_genomes_project X 125728815 125729150 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016207.1 MGP_NODShiLtJ_G0014315.1 mouse_genomes_project X 52152473 52152964 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099665.1 MGP_NODShiLtJ_G0038059.1 mouse_genomes_project X 36307687 36307792 - Gm26437 snRNA snRNA MGP_NODShiLtJ_T0096587.1 MGP_NODShiLtJ_G0035759.1 mouse_genomes_project X 110234625 110238289 - MGP_NODShiLtJ_P0096587 Dmrtc1a protein_coding protein_coding MGP_NODShiLtJ_T0096588.1 MGP_NODShiLtJ_G0035759.1 mouse_genomes_project X 110234631 110237889 - MGP_NODShiLtJ_P0096588 Dmrtc1a protein_coding protein_coding MGP_NODShiLtJ_T0096589.1 MGP_NODShiLtJ_G0035759.1 mouse_genomes_project X 110234631 110238289 - MGP_NODShiLtJ_P0096589 Dmrtc1a protein_coding protein_coding MGP_NODShiLtJ_T0096590.1 MGP_NODShiLtJ_G0035759.1 mouse_genomes_project X 110234631 110237978 - MGP_NODShiLtJ_P0096590 Dmrtc1a protein_coding protein_coding MGP_NODShiLtJ_T0100956.1 MGP_NODShiLtJ_G0039350.1 mouse_genomes_project X 86489401 86489533 - Gm24470 snoRNA snoRNA MGP_NODShiLtJ_T0097442.1 MGP_NODShiLtJ_G0036010.1 mouse_genomes_project X 177824106 177892247 + MGP_NODShiLtJ_P0097442 Rai2 protein_coding protein_coding MGP_NODShiLtJ_T0097443.1 MGP_NODShiLtJ_G0036010.1 mouse_genomes_project X 177824664 177892249 + MGP_NODShiLtJ_P0097443 Rai2 protein_coding protein_coding MGP_NODShiLtJ_T0096878.1 MGP_NODShiLtJ_G0035864.1 mouse_genomes_project X 148292439 148302804 - MGP_NODShiLtJ_P0096878 Nxf7 protein_coding protein_coding MGP_NODShiLtJ_T0096879.1 MGP_NODShiLtJ_G0035864.1 mouse_genomes_project X 148292439 148312502 - MGP_NODShiLtJ_P0096879 Nxf7 protein_coding protein_coding MGP_NODShiLtJ_T0096880.1 MGP_NODShiLtJ_G0035864.1 mouse_genomes_project X 148292641 148307614 - MGP_NODShiLtJ_P0096880 Nxf7 protein_coding protein_coding MGP_NODShiLtJ_T0096881.1 MGP_NODShiLtJ_G0035864.1 mouse_genomes_project X 148297250 148299004 - Nxf7 protein_coding retained_intron MGP_NODShiLtJ_T0096882.1 MGP_NODShiLtJ_G0035864.1 mouse_genomes_project X 148302167 148312483 - MGP_NODShiLtJ_P0096882 Nxf7 protein_coding protein_coding MGP_NODShiLtJ_T0096883.1 MGP_NODShiLtJ_G0035864.1 mouse_genomes_project X 148302350 148310432 - MGP_NODShiLtJ_P0096883 Nxf7 protein_coding protein_coding MGP_NODShiLtJ_T0096875.1 MGP_NODShiLtJ_G0035863.1 mouse_genomes_project X 148154825 148164434 + MGP_NODShiLtJ_P0096875 protein_coding protein_coding MGP_NODShiLtJ_T0016612.1 MGP_NODShiLtJ_G0014720.1 mouse_genomes_project X 148328324 148329066 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095408.1 MGP_NODShiLtJ_G0035443.1 mouse_genomes_project X 34753648 34756922 - MGP_NODShiLtJ_P0095408 protein_coding protein_coding MGP_NODShiLtJ_T0095268.1 MGP_NODShiLtJ_G0035390.1 mouse_genomes_project X 16827043 16840315 + MGP_NODShiLtJ_P0095268 Rgn protein_coding protein_coding MGP_NODShiLtJ_T0095953.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76390228 76393218 - Naa10 protein_coding processed_transcript MGP_NODShiLtJ_T0095954.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76390228 76395296 - MGP_NODShiLtJ_P0095954 Naa10 protein_coding protein_coding MGP_NODShiLtJ_T0095955.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76390251 76395236 - MGP_NODShiLtJ_P0095955 Naa10 protein_coding protein_coding MGP_NODShiLtJ_T0095956.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76390275 76395184 - MGP_NODShiLtJ_P0095956 Naa10 protein_coding protein_coding MGP_NODShiLtJ_T0095957.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76390435 76395246 - MGP_NODShiLtJ_P0095957 Naa10 protein_coding protein_coding MGP_NODShiLtJ_T0095958.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76390447 76393260 - Naa10 protein_coding processed_transcript MGP_NODShiLtJ_T0095959.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76390829 76395180 - MGP_NODShiLtJ_P0095959 Naa10 protein_coding protein_coding MGP_NODShiLtJ_T0095960.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76391216 76393818 - Naa10 protein_coding retained_intron MGP_NODShiLtJ_T0095961.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76391424 76395258 - Naa10 protein_coding retained_intron MGP_NODShiLtJ_T0095962.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76394328 76395207 - Naa10 protein_coding retained_intron MGP_NODShiLtJ_T0095963.1 MGP_NODShiLtJ_G0035611.1 mouse_genomes_project X 76394464 76395204 - Naa10 protein_coding retained_intron MGP_NODShiLtJ_T0011650.1 MGP_NODShiLtJ_G0009783.1 mouse_genomes_project X 86729195 86729298 - Gm23671 misc_RNA misc_RNA MGP_NODShiLtJ_T0098137.1 MGP_NODShiLtJ_G0036549.1 mouse_genomes_project X 170787946 170788065 + n-R5s16 rRNA rRNA MGP_NODShiLtJ_T0016144.1 MGP_NODShiLtJ_G0014252.1 mouse_genomes_project X 33050751 33051357 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095180.1 MGP_NODShiLtJ_G0035362.1 mouse_genomes_project X 5374539 5447979 + MGP_NODShiLtJ_P0095180 Otc protein_coding protein_coding MGP_NODShiLtJ_T0095181.1 MGP_NODShiLtJ_G0035362.1 mouse_genomes_project X 5374601 5443210 + MGP_NODShiLtJ_P0095181 Otc protein_coding protein_coding MGP_NODShiLtJ_T0016329.1 MGP_NODShiLtJ_G0014437.1 mouse_genomes_project X 81417192 81418264 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095583.1 MGP_NODShiLtJ_G0035492.1 mouse_genomes_project X 48781656 48787436 - MGP_NODShiLtJ_P0095583 protein_coding protein_coding MGP_NODShiLtJ_T0095584.1 MGP_NODShiLtJ_G0035492.1 mouse_genomes_project X 48781656 48798447 - MGP_NODShiLtJ_P0095584 protein_coding protein_coding MGP_NODShiLtJ_T0095585.1 MGP_NODShiLtJ_G0035492.1 mouse_genomes_project X 48781665 48798578 - MGP_NODShiLtJ_P0095585 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0095586.1 MGP_NODShiLtJ_G0035492.1 mouse_genomes_project X 48785534 48796063 - MGP_NODShiLtJ_P0095586 protein_coding protein_coding MGP_NODShiLtJ_T0095587.1 MGP_NODShiLtJ_G0035492.1 mouse_genomes_project X 48793664 48798447 - MGP_NODShiLtJ_P0095587 protein_coding protein_coding MGP_NODShiLtJ_T0095588.1 MGP_NODShiLtJ_G0035492.1 mouse_genomes_project X 48795643 48798433 - protein_coding processed_transcript MGP_NODShiLtJ_T0016626.1 MGP_NODShiLtJ_G0014734.1 mouse_genomes_project X 150033903 150034501 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095314.1 MGP_NODShiLtJ_G0035401.1 mouse_genomes_project X 17264728 17284902 - Uxt protein_coding processed_transcript MGP_NODShiLtJ_T0095315.1 MGP_NODShiLtJ_G0035401.1 mouse_genomes_project X 17274572 17284928 - MGP_NODShiLtJ_P0095315 Uxt protein_coding protein_coding MGP_NODShiLtJ_T0095316.1 MGP_NODShiLtJ_G0035401.1 mouse_genomes_project X 17274833 17284826 - Uxt protein_coding retained_intron MGP_NODShiLtJ_T0095317.1 MGP_NODShiLtJ_G0035401.1 mouse_genomes_project X 17274839 17284911 - Uxt protein_coding processed_transcript MGP_NODShiLtJ_T0095318.1 MGP_NODShiLtJ_G0035401.1 mouse_genomes_project X 17281972 17284897 - Uxt protein_coding retained_intron MGP_NODShiLtJ_T0095319.1 MGP_NODShiLtJ_G0035401.1 mouse_genomes_project X 17284327 17284885 - Uxt protein_coding processed_transcript MGP_NODShiLtJ_T0096526.1 MGP_NODShiLtJ_G0035741.1 mouse_genomes_project X 108539637 108544091 + MGP_NODShiLtJ_P0096526 Itgb1bp2 protein_coding protein_coding MGP_NODShiLtJ_T0096527.1 MGP_NODShiLtJ_G0035741.1 mouse_genomes_project X 108542660 108543694 + Itgb1bp2 protein_coding retained_intron MGP_NODShiLtJ_T0016482.1 MGP_NODShiLtJ_G0014590.1 mouse_genomes_project X 112791682 112792777 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095163.1 MGP_NODShiLtJ_G0035357.1 mouse_genomes_project X 4906004 4906585 + MGP_NODShiLtJ_P0095163 Hypm protein_coding protein_coding MGP_NODShiLtJ_T0016773.1 MGP_NODShiLtJ_G0014881.1 mouse_genomes_project X 182585495 182585883 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095892.1 MGP_NODShiLtJ_G0035604.1 mouse_genomes_project X 76228778 76233299 + Srpk3 protein_coding retained_intron MGP_NODShiLtJ_T0095893.1 MGP_NODShiLtJ_G0035604.1 mouse_genomes_project X 76228778 76233299 + MGP_NODShiLtJ_P0095893 Srpk3 protein_coding protein_coding MGP_NODShiLtJ_T0095894.1 MGP_NODShiLtJ_G0035604.1 mouse_genomes_project X 76232318 76232976 + Srpk3 protein_coding retained_intron MGP_NODShiLtJ_T0095895.1 MGP_NODShiLtJ_G0035604.1 mouse_genomes_project X 76232351 76233102 + Srpk3 protein_coding retained_intron MGP_NODShiLtJ_T0102277.1 MGP_NODShiLtJ_G0040443.1 mouse_genomes_project X 148108171 148260583 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0096230.1 MGP_NODShiLtJ_G0035660.1 mouse_genomes_project X 81196285 81201673 + MGP_NODShiLtJ_P0096230 protein_coding protein_coding MGP_NODShiLtJ_T0016181.1 MGP_NODShiLtJ_G0014289.1 mouse_genomes_project X 43800974 43802129 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096906.1 MGP_NODShiLtJ_G0035873.1 mouse_genomes_project X 148874101 148888288 - MGP_NODShiLtJ_P0096906 Nxf3 protein_coding protein_coding MGP_NODShiLtJ_T0096907.1 MGP_NODShiLtJ_G0035873.1 mouse_genomes_project X 148881613 148888275 - MGP_NODShiLtJ_P0096907 Nxf3 protein_coding protein_coding MGP_NODShiLtJ_T0009317.1 MGP_NODShiLtJ_G0007472.1 mouse_genomes_project X 102142732 102143360 - 1700010D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0096299.1 MGP_NODShiLtJ_G0035688.1 mouse_genomes_project X 100088972 100096427 + MGP_NODShiLtJ_P0096299 AU015836 protein_coding protein_coding MGP_NODShiLtJ_T0096300.1 MGP_NODShiLtJ_G0035688.1 mouse_genomes_project X 100088987 100096427 + MGP_NODShiLtJ_P0096300 AU015836 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096301.1 MGP_NODShiLtJ_G0035688.1 mouse_genomes_project X 100088995 100089972 + MGP_NODShiLtJ_P0096301 AU015836 protein_coding protein_coding MGP_NODShiLtJ_T0096302.1 MGP_NODShiLtJ_G0035688.1 mouse_genomes_project X 100089955 100092620 + AU015836 protein_coding processed_transcript MGP_NODShiLtJ_T0096303.1 MGP_NODShiLtJ_G0035688.1 mouse_genomes_project X 100090109 100096028 + MGP_NODShiLtJ_P0096303 AU015836 protein_coding protein_coding MGP_NODShiLtJ_T0097014.1 MGP_NODShiLtJ_G0035910.1 mouse_genomes_project X 153199392 153209957 + MGP_NODShiLtJ_P0097014 Cldn2 protein_coding protein_coding MGP_NODShiLtJ_T0097015.1 MGP_NODShiLtJ_G0035910.1 mouse_genomes_project X 153201348 153207284 + MGP_NODShiLtJ_P0097015 Cldn2 protein_coding protein_coding MGP_NODShiLtJ_T0097016.1 MGP_NODShiLtJ_G0035910.1 mouse_genomes_project X 153204642 153207672 + MGP_NODShiLtJ_P0097016 Cldn2 protein_coding protein_coding MGP_NODShiLtJ_T0016319.1 MGP_NODShiLtJ_G0014427.1 mouse_genomes_project X 79872827 79873266 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095152.1 MGP_NODShiLtJ_G0035353.1 mouse_genomes_project X 4255068 4261049 - MGP_NODShiLtJ_P0095152 Gm14862 protein_coding protein_coding MGP_NODShiLtJ_T0100947.1 MGP_NODShiLtJ_G0039341.1 mouse_genomes_project X 76207033 76207156 + Gm25226 snoRNA snoRNA MGP_NODShiLtJ_T0097476.1 MGP_NODShiLtJ_G0036020.1 mouse_genomes_project X 180234097 180271199 + MGP_NODShiLtJ_P0097476 Ap1s2 protein_coding protein_coding MGP_NODShiLtJ_T0097477.1 MGP_NODShiLtJ_G0036020.1 mouse_genomes_project X 180234222 180270892 + MGP_NODShiLtJ_P0097477 Ap1s2 protein_coding protein_coding MGP_NODShiLtJ_T0097478.1 MGP_NODShiLtJ_G0036020.1 mouse_genomes_project X 180236481 180270889 + MGP_NODShiLtJ_P0097478 Ap1s2 protein_coding protein_coding MGP_NODShiLtJ_T0095787.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73506724 73530545 + MGP_NODShiLtJ_P0095787 Mtmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095788.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73506724 73562484 + MGP_NODShiLtJ_P0095788 Mtmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095789.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73506901 73536068 + MGP_NODShiLtJ_P0095789 Mtmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095790.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73514631 73530523 + MGP_NODShiLtJ_P0095790 Mtmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095791.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73514631 73530523 + MGP_NODShiLtJ_P0095791 Mtmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095792.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73514631 73530523 + MGP_NODShiLtJ_P0095792 Mtmr1 protein_coding protein_coding MGP_NODShiLtJ_T0095793.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73532965 73534357 + Mtmr1 protein_coding retained_intron MGP_NODShiLtJ_T0095794.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73533466 73534698 + Mtmr1 protein_coding retained_intron MGP_NODShiLtJ_T0095795.1 MGP_NODShiLtJ_G0035569.1 mouse_genomes_project X 73535761 73561951 + Mtmr1 protein_coding retained_intron MGP_NODShiLtJ_T0095124.1 MGP_NODShiLtJ_G0035340.1 mouse_genomes_project X 3038272 3050949 - MGP_NODShiLtJ_P0095124 Porcn protein_coding protein_coding MGP_NODShiLtJ_T0095125.1 MGP_NODShiLtJ_G0035340.1 mouse_genomes_project X 3038273 3050915 - MGP_NODShiLtJ_P0095125 Porcn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095126.1 MGP_NODShiLtJ_G0035340.1 mouse_genomes_project X 3038274 3050925 - MGP_NODShiLtJ_P0095126 Porcn protein_coding protein_coding MGP_NODShiLtJ_T0095127.1 MGP_NODShiLtJ_G0035340.1 mouse_genomes_project X 3038274 3050925 - MGP_NODShiLtJ_P0095127 Porcn protein_coding protein_coding MGP_NODShiLtJ_T0095128.1 MGP_NODShiLtJ_G0035340.1 mouse_genomes_project X 3038274 3050925 - MGP_NODShiLtJ_P0095128 Porcn protein_coding protein_coding MGP_NODShiLtJ_T0095129.1 MGP_NODShiLtJ_G0035340.1 mouse_genomes_project X 3038277 3050921 - MGP_NODShiLtJ_P0095129 Porcn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095130.1 MGP_NODShiLtJ_G0035340.1 mouse_genomes_project X 3047861 3050937 - Porcn protein_coding retained_intron MGP_NODShiLtJ_T0016169.1 MGP_NODShiLtJ_G0014277.1 mouse_genomes_project X 39525927 39526500 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095387.1 MGP_NODShiLtJ_G0035429.1 mouse_genomes_project X 33972012 33974895 - MGP_NODShiLtJ_P0095387 Rpl39 protein_coding protein_coding MGP_NODShiLtJ_T0095388.1 MGP_NODShiLtJ_G0035429.1 mouse_genomes_project X 33973135 33974659 - Rpl39 protein_coding retained_intron MGP_NODShiLtJ_T0095389.1 MGP_NODShiLtJ_G0035429.1 mouse_genomes_project X 33974029 33974649 - Rpl39 protein_coding retained_intron MGP_NODShiLtJ_T0016266.1 MGP_NODShiLtJ_G0014374.1 mouse_genomes_project X 67237791 67238049 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016357.1 MGP_NODShiLtJ_G0014465.1 mouse_genomes_project X 90207950 90208212 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016249.1 MGP_NODShiLtJ_G0014357.1 mouse_genomes_project X 62394927 62395917 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016504.1 MGP_NODShiLtJ_G0014612.1 mouse_genomes_project X 116199070 116203881 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016506.1 MGP_NODShiLtJ_G0014614.1 mouse_genomes_project X 116646909 116649789 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016339.1 MGP_NODShiLtJ_G0014447.1 mouse_genomes_project X 83756697 83757382 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100939.1 MGP_NODShiLtJ_G0039333.1 mouse_genomes_project X 34594039 34594182 - snoRNA snoRNA MGP_NODShiLtJ_T0016154.1 MGP_NODShiLtJ_G0014262.1 mouse_genomes_project X 36077662 36077918 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018437.1 MGP_NODShiLtJ_G0015633.1 mouse_genomes_project X 2130573 2132693 + Gm14379 processed_transcript processed_transcript MGP_NODShiLtJ_T0098124.1 MGP_NODShiLtJ_G0036536.1 mouse_genomes_project X 48892753 48892841 + n-R5s6 rRNA rRNA MGP_NODShiLtJ_T0011020.1 MGP_NODShiLtJ_G0009153.1 mouse_genomes_project X 35100099 35100179 + Mir3110 miRNA miRNA MGP_NODShiLtJ_T0094945.1 MGP_NODShiLtJ_G0035300.1 mouse_genomes_project X 1089500 1353163 + MGP_NODShiLtJ_P0094945 Shroom4 protein_coding protein_coding MGP_NODShiLtJ_T0094946.1 MGP_NODShiLtJ_G0035300.1 mouse_genomes_project X 1115577 1299118 + MGP_NODShiLtJ_P0094946 Shroom4 protein_coding protein_coding MGP_NODShiLtJ_T0094947.1 MGP_NODShiLtJ_G0035300.1 mouse_genomes_project X 1292863 1356776 + MGP_NODShiLtJ_P0094947 Shroom4 protein_coding protein_coding MGP_NODShiLtJ_T0016514.1 MGP_NODShiLtJ_G0014622.1 mouse_genomes_project X 119244571 119247200 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099670.1 MGP_NODShiLtJ_G0038064.1 mouse_genomes_project X 47174648 47174749 + Gm22612 snRNA snRNA MGP_NODShiLtJ_T0095821.1 MGP_NODShiLtJ_G0035577.1 mouse_genomes_project X 74232215 74251408 + MGP_NODShiLtJ_P0095821 Cnga2 protein_coding protein_coding MGP_NODShiLtJ_T0095822.1 MGP_NODShiLtJ_G0035577.1 mouse_genomes_project X 74232221 74242773 + Cnga2 protein_coding processed_transcript MGP_NODShiLtJ_T0009281.1 MGP_NODShiLtJ_G0007447.1 mouse_genomes_project X 7633378 7648579 - Gm14635 lincRNA lincRNA MGP_NODShiLtJ_T0009282.1 MGP_NODShiLtJ_G0007447.1 mouse_genomes_project X 7634233 7638819 - Gm14635 lincRNA lincRNA MGP_NODShiLtJ_T0016577.1 MGP_NODShiLtJ_G0014685.1 mouse_genomes_project X 137161293 137161956 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096557.1 MGP_NODShiLtJ_G0035749.1 mouse_genomes_project X 109320791 109335269 - MGP_NODShiLtJ_P0096557 Ercc6l protein_coding protein_coding MGP_NODShiLtJ_T0016134.1 MGP_NODShiLtJ_G0014242.1 mouse_genomes_project X 18044221 18044602 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016630.1 MGP_NODShiLtJ_G0014738.1 mouse_genomes_project X 150580935 150584370 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016204.1 MGP_NODShiLtJ_G0014312.1 mouse_genomes_project X 50808035 50808233 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011010.1 MGP_NODShiLtJ_G0009143.1 mouse_genomes_project X 2604774 2604895 + Mir1198 miRNA miRNA MGP_NODShiLtJ_T0097562.1 MGP_NODShiLtJ_G0036044.1 mouse_genomes_project X 183832425 183834645 - MGP_NODShiLtJ_P0097562 Tmsb4x protein_coding protein_coding MGP_NODShiLtJ_T0097563.1 MGP_NODShiLtJ_G0036044.1 mouse_genomes_project X 183832427 183834479 - MGP_NODShiLtJ_P0097563 Tmsb4x protein_coding protein_coding MGP_NODShiLtJ_T0097564.1 MGP_NODShiLtJ_G0036044.1 mouse_genomes_project X 183832624 183834156 - MGP_NODShiLtJ_P0097564 Tmsb4x protein_coding protein_coding MGP_NODShiLtJ_T0099707.1 MGP_NODShiLtJ_G0038101.1 mouse_genomes_project X 151392069 151392176 - Gm22057 snRNA snRNA MGP_NODShiLtJ_T0095677.1 MGP_NODShiLtJ_G0035530.1 mouse_genomes_project X 56858450 56864142 + MGP_NODShiLtJ_P0095677 Brs3 protein_coding protein_coding MGP_NODShiLtJ_T0016586.1 MGP_NODShiLtJ_G0014694.1 mouse_genomes_project X 141060916 141061239 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099703.1 MGP_NODShiLtJ_G0038097.1 mouse_genomes_project X 138414556 138414661 + Gm22139 snRNA snRNA MGP_NODShiLtJ_T0011078.1 MGP_NODShiLtJ_G0009211.1 mouse_genomes_project X 89935131 89935214 + Gm44378 miRNA miRNA MGP_NODShiLtJ_T0100984.1 MGP_NODShiLtJ_G0039378.1 mouse_genomes_project X 173043619 173043755 + Gm24281 snoRNA snoRNA MGP_NODShiLtJ_T0096217.1 MGP_NODShiLtJ_G0035651.1 mouse_genomes_project X 79083449 79087358 + MGP_NODShiLtJ_P0096217 protein_coding protein_coding MGP_NODShiLtJ_T0011655.1 MGP_NODShiLtJ_G0009788.1 mouse_genomes_project X 110933523 110933604 + Gm27520 misc_RNA misc_RNA MGP_NODShiLtJ_T0097003.1 MGP_NODShiLtJ_G0035905.1 mouse_genomes_project X 152833958 152916487 + MGP_NODShiLtJ_P0097003 D330045A20Rik protein_coding protein_coding MGP_NODShiLtJ_T0097004.1 MGP_NODShiLtJ_G0035905.1 mouse_genomes_project X 152833962 152850345 + D330045A20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0097005.1 MGP_NODShiLtJ_G0035905.1 mouse_genomes_project X 152833962 152916487 + MGP_NODShiLtJ_P0097005 D330045A20Rik protein_coding protein_coding MGP_NODShiLtJ_T0096229.1 MGP_NODShiLtJ_G0035659.1 mouse_genomes_project X 81196245 81201673 + MGP_NODShiLtJ_P0096229 Gm14743 protein_coding protein_coding MGP_NODShiLtJ_T0096832.1 MGP_NODShiLtJ_G0035849.1 mouse_genomes_project X 147082382 147084785 + MGP_NODShiLtJ_P0096832 Rpl36a protein_coding protein_coding MGP_NODShiLtJ_T0096833.1 MGP_NODShiLtJ_G0035849.1 mouse_genomes_project X 147082417 147084791 + Rpl36a protein_coding retained_intron MGP_NODShiLtJ_T0096834.1 MGP_NODShiLtJ_G0035849.1 mouse_genomes_project X 147082418 147084791 + MGP_NODShiLtJ_P0096834 Rpl36a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0096835.1 MGP_NODShiLtJ_G0035849.1 mouse_genomes_project X 147082429 147084762 + Rpl36a protein_coding retained_intron MGP_NODShiLtJ_T0096836.1 MGP_NODShiLtJ_G0035849.1 mouse_genomes_project X 147082818 147083745 + Rpl36a protein_coding retained_intron MGP_NODShiLtJ_T0096837.1 MGP_NODShiLtJ_G0035849.1 mouse_genomes_project X 147083809 147084725 + Rpl36a protein_coding retained_intron MGP_NODShiLtJ_T0016748.1 MGP_NODShiLtJ_G0014856.1 mouse_genomes_project X 175979081 175979578 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097137.1 MGP_NODShiLtJ_G0035944.1 mouse_genomes_project X 161304986 161444133 + Htr2c protein_coding retained_intron MGP_NODShiLtJ_T0097138.1 MGP_NODShiLtJ_G0035944.1 mouse_genomes_project X 161304986 161339945 + Htr2c protein_coding retained_intron MGP_NODShiLtJ_T0097139.1 MGP_NODShiLtJ_G0035944.1 mouse_genomes_project X 161305103 161437161 + Htr2c protein_coding processed_transcript MGP_NODShiLtJ_T0097140.1 MGP_NODShiLtJ_G0035944.1 mouse_genomes_project X 161305496 161600797 + MGP_NODShiLtJ_P0097140 Htr2c protein_coding protein_coding MGP_NODShiLtJ_T0097141.1 MGP_NODShiLtJ_G0035944.1 mouse_genomes_project X 161434999 161614614 + MGP_NODShiLtJ_P0097141 Htr2c protein_coding protein_coding MGP_NODShiLtJ_T0016658.1 MGP_NODShiLtJ_G0014766.1 mouse_genomes_project X 155826879 155827821 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100940.1 MGP_NODShiLtJ_G0039334.1 mouse_genomes_project X 40364191 40364321 - Gm23705 snoRNA snoRNA MGP_NODShiLtJ_T0016607.1 MGP_NODShiLtJ_G0014715.1 mouse_genomes_project X 147371845 147372751 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011104.1 MGP_NODShiLtJ_G0009237.1 mouse_genomes_project X 157619086 157619211 - miRNA miRNA MGP_NODShiLtJ_T0016230.1 MGP_NODShiLtJ_G0014338.1 mouse_genomes_project X 59206013 59206689 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016736.1 MGP_NODShiLtJ_G0014844.1 mouse_genomes_project X 173906901 173907988 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096594.1 MGP_NODShiLtJ_G0035763.1 mouse_genomes_project X 110860600 110871446 + MGP_NODShiLtJ_P0096594 Tsx protein_coding protein_coding MGP_NODShiLtJ_T0096709.1 MGP_NODShiLtJ_G0035802.1 mouse_genomes_project X 119526638 119529554 + MGP_NODShiLtJ_P0096709 Pou3f4 protein_coding protein_coding MGP_NODShiLtJ_T0009324.1 MGP_NODShiLtJ_G0007477.1 mouse_genomes_project X 110948240 110961107 + Jpx lincRNA lincRNA MGP_NODShiLtJ_T0009325.1 MGP_NODShiLtJ_G0007477.1 mouse_genomes_project X 110948259 110949303 + Jpx lincRNA lincRNA MGP_NODShiLtJ_T0009326.1 MGP_NODShiLtJ_G0007477.1 mouse_genomes_project X 110948452 110957914 + Jpx lincRNA lincRNA MGP_NODShiLtJ_T0009327.1 MGP_NODShiLtJ_G0007477.1 mouse_genomes_project X 110948477 110957635 + Jpx lincRNA lincRNA MGP_NODShiLtJ_T0096616.1 MGP_NODShiLtJ_G0035776.1 mouse_genomes_project X 113440228 113450887 + MGP_NODShiLtJ_P0096616 Fgf16 protein_coding protein_coding MGP_NODShiLtJ_T0097056.1 MGP_NODShiLtJ_G0035919.1 mouse_genomes_project X 154329741 154334870 - MGP_NODShiLtJ_P0097056 Tex13 protein_coding protein_coding MGP_NODShiLtJ_T0097057.1 MGP_NODShiLtJ_G0035919.1 mouse_genomes_project X 154330702 154332289 - Tex13 protein_coding retained_intron MGP_NODShiLtJ_T0100952.1 MGP_NODShiLtJ_G0039346.1 mouse_genomes_project X 78675292 78675419 + Gm23320 snoRNA snoRNA MGP_NODShiLtJ_T0016486.1 MGP_NODShiLtJ_G0014594.1 mouse_genomes_project X 113248711 113248949 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100976.1 MGP_NODShiLtJ_G0039370.1 mouse_genomes_project X 157147674 157147803 + Gm23325 snoRNA snoRNA MGP_NODShiLtJ_T0002431.1 MGP_NODShiLtJ_G0002340.1 mouse_genomes_project X 111268958 111270970 - TEC TEC MGP_NODShiLtJ_T0016125.1 MGP_NODShiLtJ_G0014233.1 mouse_genomes_project X 16588801 16589207 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096197.1 MGP_NODShiLtJ_G0035644.1 mouse_genomes_project X 78113050 78119131 - MGP_NODShiLtJ_P0096197 Mtcp1 protein_coding protein_coding MGP_NODShiLtJ_T0096198.1 MGP_NODShiLtJ_G0035644.1 mouse_genomes_project X 78113256 78119006 - Mtcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0096199.1 MGP_NODShiLtJ_G0035644.1 mouse_genomes_project X 78113383 78119176 - MGP_NODShiLtJ_P0096199 Mtcp1 protein_coding protein_coding MGP_NODShiLtJ_T0096200.1 MGP_NODShiLtJ_G0035644.1 mouse_genomes_project X 78115761 78119156 - Mtcp1 protein_coding retained_intron MGP_NODShiLtJ_T0016220.1 MGP_NODShiLtJ_G0014328.1 mouse_genomes_project X 57518854 57520030 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097126.1 MGP_NODShiLtJ_G0035940.1 mouse_genomes_project X 158240458 158578460 - MGP_NODShiLtJ_P0097126 Trpc5 protein_coding protein_coding MGP_NODShiLtJ_T0097127.1 MGP_NODShiLtJ_G0035940.1 mouse_genomes_project X 158279979 158578283 - Trpc5 protein_coding retained_intron MGP_NODShiLtJ_T0099682.1 MGP_NODShiLtJ_G0038076.1 mouse_genomes_project X 80495791 80495964 + Gm23121 snRNA snRNA MGP_NODShiLtJ_T0095229.1 MGP_NODShiLtJ_G0035373.1 mouse_genomes_project X 9060147 9069692 + MGP_NODShiLtJ_P0095229 Gpr34 protein_coding protein_coding MGP_NODShiLtJ_T0095230.1 MGP_NODShiLtJ_G0035373.1 mouse_genomes_project X 9060827 9069694 + MGP_NODShiLtJ_P0095230 Gpr34 protein_coding protein_coding MGP_NODShiLtJ_T0011644.1 MGP_NODShiLtJ_G0009777.1 mouse_genomes_project X 33961527 33961798 - Gm24809 misc_RNA misc_RNA MGP_NODShiLtJ_T0096857.1 MGP_NODShiLtJ_G0035856.1 mouse_genomes_project X 147344910 147348291 - MGP_NODShiLtJ_P0096857 Armcx2 protein_coding protein_coding MGP_NODShiLtJ_T0096858.1 MGP_NODShiLtJ_G0035856.1 mouse_genomes_project X 147344912 147349987 - MGP_NODShiLtJ_P0096858 Armcx2 protein_coding protein_coding MGP_NODShiLtJ_T0096859.1 MGP_NODShiLtJ_G0035856.1 mouse_genomes_project X 147344912 147349762 - MGP_NODShiLtJ_P0096859 Armcx2 protein_coding protein_coding MGP_NODShiLtJ_T0096860.1 MGP_NODShiLtJ_G0035856.1 mouse_genomes_project X 147344912 147349987 - MGP_NODShiLtJ_P0096860 Armcx2 protein_coding protein_coding MGP_NODShiLtJ_T0096861.1 MGP_NODShiLtJ_G0035856.1 mouse_genomes_project X 147347250 147348277 - Armcx2 protein_coding processed_transcript MGP_NODShiLtJ_T0096862.1 MGP_NODShiLtJ_G0035856.1 mouse_genomes_project X 147348025 147348708 - Armcx2 protein_coding processed_transcript MGP_NODShiLtJ_T0096863.1 MGP_NODShiLtJ_G0035856.1 mouse_genomes_project X 147348652 147349727 - Armcx2 protein_coding processed_transcript MGP_NODShiLtJ_T0095643.1 MGP_NODShiLtJ_G0035521.1 mouse_genomes_project X 55897291 55923686 - MGP_NODShiLtJ_P0095643 Gm773 protein_coding protein_coding MGP_NODShiLtJ_T0095644.1 MGP_NODShiLtJ_G0035521.1 mouse_genomes_project X 55907166 55923686 - Gm773 protein_coding processed_transcript MGP_NODShiLtJ_T0016635.1 MGP_NODShiLtJ_G0014743.1 mouse_genomes_project X 152581835 152583063 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101452.1 MGP_NODShiLtJ_G0039628.1 mouse_genomes_project X 110563060 110669051 - unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101453.1 MGP_NODShiLtJ_G0039628.1 mouse_genomes_project X 110628606 110748730 - unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101454.1 MGP_NODShiLtJ_G0039628.1 mouse_genomes_project X 110628606 110669051 - unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0101455.1 MGP_NODShiLtJ_G0039628.1 mouse_genomes_project X 110628672 110665471 - unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101456.1 MGP_NODShiLtJ_G0039628.1 mouse_genomes_project X 110629962 110669043 - unitary_pseudogene retained_intron MGP_NODShiLtJ_T0101457.1 MGP_NODShiLtJ_G0039628.1 mouse_genomes_project X 110631502 110726848 - unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101458.1 MGP_NODShiLtJ_G0039628.1 mouse_genomes_project X 110631513 110716404 - unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0099657.1 MGP_NODShiLtJ_G0038051.1 mouse_genomes_project X 15944414 15944521 - Gm23678 snRNA snRNA MGP_NODShiLtJ_T0099655.1 MGP_NODShiLtJ_G0038049.1 mouse_genomes_project X 13225438 13225542 + Gm22294 snRNA snRNA MGP_NODShiLtJ_T0097473.1 MGP_NODShiLtJ_G0036017.1 mouse_genomes_project X 179189052 179191657 - MGP_NODShiLtJ_P0097473 S100g protein_coding protein_coding MGP_NODShiLtJ_T0016676.1 MGP_NODShiLtJ_G0014784.1 mouse_genomes_project X 159252052 159252748 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095724.1 MGP_NODShiLtJ_G0035544.1 mouse_genomes_project X 60567136 60674893 - MGP_NODShiLtJ_P0095724 Gm7073 protein_coding protein_coding MGP_NODShiLtJ_T0098121.1 MGP_NODShiLtJ_G0036533.1 mouse_genomes_project X 8616539 8616651 - n-R5s3 rRNA rRNA MGP_NODShiLtJ_T0101239.1 MGP_NODShiLtJ_G0039530.1 mouse_genomes_project X 142189864 142190573 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0099659.1 MGP_NODShiLtJ_G0038053.1 mouse_genomes_project X 17101256 17101361 - Gm26065 snRNA snRNA MGP_NODShiLtJ_T0096710.1 MGP_NODShiLtJ_G0035803.1 mouse_genomes_project X 119886152 119900270 + MGP_NODShiLtJ_P0096710 protein_coding protein_coding MGP_NODShiLtJ_T0094944.1 MGP_NODShiLtJ_G0035299.1 mouse_genomes_project X 1001238 1007853 - MGP_NODShiLtJ_P0094944 Bmp15 protein_coding protein_coding MGP_NODShiLtJ_T0016079.1 MGP_NODShiLtJ_G0014187.1 mouse_genomes_project X 3972964 3973625 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016355.1 MGP_NODShiLtJ_G0014463.1 mouse_genomes_project X 90166889 90167318 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096929.1 MGP_NODShiLtJ_G0035882.1 mouse_genomes_project X 149512168 149517732 + MGP_NODShiLtJ_P0096929 protein_coding protein_coding MGP_NODShiLtJ_T0009360.1 MGP_NODShiLtJ_G0007495.1 mouse_genomes_project X 183211075 183214515 - Gm15226 lincRNA lincRNA MGP_NODShiLtJ_T0011076.1 MGP_NODShiLtJ_G0009209.1 mouse_genomes_project X 76839091 76839159 + Mir7092 miRNA miRNA MGP_NODShiLtJ_T0096958.1 MGP_NODShiLtJ_G0035891.1 mouse_genomes_project X 149840838 149858469 - MGP_NODShiLtJ_P0096958 protein_coding protein_coding MGP_NODShiLtJ_T0009298.1 MGP_NODShiLtJ_G0007458.1 mouse_genomes_project X 45053439 45416663 - lincRNA lincRNA MGP_NODShiLtJ_T0011032.1 MGP_NODShiLtJ_G0009165.1 mouse_genomes_project X 51992530 51992610 - Mir20b miRNA miRNA MGP_NODShiLtJ_T0011069.1 MGP_NODShiLtJ_G0009202.1 mouse_genomes_project X 74517070 74517155 - Mir452 miRNA miRNA MGP_NODShiLtJ_T0099679.1 MGP_NODShiLtJ_G0038073.1 mouse_genomes_project X 74903218 74903325 + Gm23461 snRNA snRNA MGP_NODShiLtJ_T0005535.1 MGP_NODShiLtJ_G0004661.1 mouse_genomes_project X 100150779 100233690 + Gm14798 antisense antisense MGP_NODShiLtJ_T0096220.1 MGP_NODShiLtJ_G0035653.1 mouse_genomes_project X 79462882 79484253 - MGP_NODShiLtJ_P0096220 Cldn34d protein_coding protein_coding MGP_NODShiLtJ_T0095144.1 MGP_NODShiLtJ_G0035345.1 mouse_genomes_project X 3732486 3749535 + MGP_NODShiLtJ_P0095144 protein_coding protein_coding MGP_NODShiLtJ_T0016638.1 MGP_NODShiLtJ_G0014746.1 mouse_genomes_project X 153193565 153193671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096778.1 MGP_NODShiLtJ_G0035833.1 mouse_genomes_project X 146302998 146317711 + MGP_NODShiLtJ_P0096778 Tnmd protein_coding protein_coding MGP_NODShiLtJ_T0011108.1 MGP_NODShiLtJ_G0009241.1 mouse_genomes_project X 161367322 161367408 + Mir1264 miRNA miRNA MGP_NODShiLtJ_T0096274.1 MGP_NODShiLtJ_G0035675.1 mouse_genomes_project X 91295867 93257489 - MGP_NODShiLtJ_P0096274 Il1rapl1 protein_coding protein_coding MGP_NODShiLtJ_T0096275.1 MGP_NODShiLtJ_G0035675.1 mouse_genomes_project X 91303823 92969368 - MGP_NODShiLtJ_P0096275 Il1rapl1 protein_coding protein_coding MGP_NODShiLtJ_T0096276.1 MGP_NODShiLtJ_G0035675.1 mouse_genomes_project X 91326552 93257489 - MGP_NODShiLtJ_P0096276 Il1rapl1 protein_coding protein_coding MGP_NODShiLtJ_T0095732.1 MGP_NODShiLtJ_G0035551.1 mouse_genomes_project X 64953920 64959151 + MGP_NODShiLtJ_P0095732 3830417A13Rik protein_coding protein_coding MGP_NODShiLtJ_T0095733.1 MGP_NODShiLtJ_G0035551.1 mouse_genomes_project X 64954720 64957880 + MGP_NODShiLtJ_P0095733 3830417A13Rik protein_coding protein_coding MGP_NODShiLtJ_T0016427.1 MGP_NODShiLtJ_G0014535.1 mouse_genomes_project X 105800284 105800679 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096766.1 MGP_NODShiLtJ_G0035829.1 mouse_genomes_project X 138856962 138871414 - MGP_NODShiLtJ_P0096766 Cldn34c4 protein_coding protein_coding MGP_NODShiLtJ_T0016524.1 MGP_NODShiLtJ_G0014632.1 mouse_genomes_project X 121668457 121669436 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099722.1 MGP_NODShiLtJ_G0038116.1 mouse_genomes_project X 180640035 180640141 - Gm25367 snRNA snRNA MGP_NODShiLtJ_T0016501.1 MGP_NODShiLtJ_G0014609.1 mouse_genomes_project X 115240832 115241780 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009290.1 MGP_NODShiLtJ_G0007452.1 mouse_genomes_project X 17569571 17584831 - 4930453H23Rik lincRNA lincRNA MGP_NODShiLtJ_T0009291.1 MGP_NODShiLtJ_G0007452.1 mouse_genomes_project X 17570048 17570306 - 4930453H23Rik lincRNA lincRNA MGP_NODShiLtJ_T0009292.1 MGP_NODShiLtJ_G0007452.1 mouse_genomes_project X 17581575 17584729 - 4930453H23Rik lincRNA lincRNA MGP_NODShiLtJ_T0096208.1 MGP_NODShiLtJ_G0035647.1 mouse_genomes_project X 78301676 78307867 - MGP_NODShiLtJ_P0096208 Rab39b protein_coding protein_coding MGP_NODShiLtJ_T0016314.1 MGP_NODShiLtJ_G0014422.1 mouse_genomes_project X 79150545 79151317 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096519.1 MGP_NODShiLtJ_G0035740.1 mouse_genomes_project X 108516970 108527476 + MGP_NODShiLtJ_P0096519 protein_coding protein_coding MGP_NODShiLtJ_T0096520.1 MGP_NODShiLtJ_G0035740.1 mouse_genomes_project X 108517207 108539141 + MGP_NODShiLtJ_P0096520 protein_coding protein_coding MGP_NODShiLtJ_T0096521.1 MGP_NODShiLtJ_G0035740.1 mouse_genomes_project X 108517387 108532074 + protein_coding retained_intron MGP_NODShiLtJ_T0096522.1 MGP_NODShiLtJ_G0035740.1 mouse_genomes_project X 108532233 108534089 + protein_coding retained_intron MGP_NODShiLtJ_T0096523.1 MGP_NODShiLtJ_G0035740.1 mouse_genomes_project X 108533063 108537660 + protein_coding retained_intron MGP_NODShiLtJ_T0096524.1 MGP_NODShiLtJ_G0035740.1 mouse_genomes_project X 108534490 108537461 + protein_coding processed_transcript MGP_NODShiLtJ_T0096525.1 MGP_NODShiLtJ_G0035740.1 mouse_genomes_project X 108535580 108537576 + protein_coding retained_intron MGP_NODShiLtJ_T0095088.1 MGP_NODShiLtJ_G0035332.1 mouse_genomes_project X 2763604 2773067 - MGP_NODShiLtJ_P0095088 Gata1 protein_coding protein_coding MGP_NODShiLtJ_T0095089.1 MGP_NODShiLtJ_G0035332.1 mouse_genomes_project X 2767622 2783373 - MGP_NODShiLtJ_P0095089 Gata1 protein_coding protein_coding MGP_NODShiLtJ_T0095090.1 MGP_NODShiLtJ_G0035332.1 mouse_genomes_project X 2768211 2769364 - MGP_NODShiLtJ_P0095090 Gata1 protein_coding protein_coding MGP_NODShiLtJ_T0016528.1 MGP_NODShiLtJ_G0014636.1 mouse_genomes_project X 121965601 121979687 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097266.1 MGP_NODShiLtJ_G0035961.1 mouse_genomes_project X 166715122 166726819 - MGP_NODShiLtJ_P0097266 Ribc1 protein_coding protein_coding MGP_NODShiLtJ_T0097267.1 MGP_NODShiLtJ_G0035961.1 mouse_genomes_project X 166720109 166726794 - Ribc1 protein_coding processed_transcript MGP_NODShiLtJ_T0102247.1 MGP_NODShiLtJ_G0040413.1 mouse_genomes_project X 72428011 72428851 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0096296.1 MGP_NODShiLtJ_G0035687.1 mouse_genomes_project X 99865226 99937620 - MGP_NODShiLtJ_P0096296 Pdk3 protein_coding protein_coding MGP_NODShiLtJ_T0096297.1 MGP_NODShiLtJ_G0035687.1 mouse_genomes_project X 99865715 99869740 - Pdk3 protein_coding processed_transcript MGP_NODShiLtJ_T0096298.1 MGP_NODShiLtJ_G0035687.1 mouse_genomes_project X 99882190 99889366 - Pdk3 protein_coding processed_transcript MGP_NODShiLtJ_T0016700.1 MGP_NODShiLtJ_G0014808.1 mouse_genomes_project X 166336273 166337188 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095737.1 MGP_NODShiLtJ_G0035554.1 mouse_genomes_project X 67554767 67555631 - MGP_NODShiLtJ_P0095737 4930447F04Rik protein_coding protein_coding MGP_NODShiLtJ_T0095310.1 MGP_NODShiLtJ_G0035399.1 mouse_genomes_project X 17248467 17254569 - MGP_NODShiLtJ_P0095310 Cfp protein_coding protein_coding MGP_NODShiLtJ_T0095311.1 MGP_NODShiLtJ_G0035399.1 mouse_genomes_project X 17248664 17250628 - Cfp protein_coding processed_transcript MGP_NODShiLtJ_T0016067.1 MGP_NODShiLtJ_G0014175.1 mouse_genomes_project X 2460592 2460996 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102251.1 MGP_NODShiLtJ_G0040417.1 mouse_genomes_project X 79194439 79195399 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016485.1 MGP_NODShiLtJ_G0014593.1 mouse_genomes_project X 113159633 113160724 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016466.1 MGP_NODShiLtJ_G0014574.1 mouse_genomes_project X 110996915 110997140 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096218.1 MGP_NODShiLtJ_G0035652.1 mouse_genomes_project X 79244225 79248850 + MGP_NODShiLtJ_P0096218 Cldn34b4 protein_coding protein_coding MGP_NODShiLtJ_T0096219.1 MGP_NODShiLtJ_G0035652.1 mouse_genomes_project X 79244327 79248759 + MGP_NODShiLtJ_P0096219 Cldn34b4 protein_coding protein_coding MGP_NODShiLtJ_T0018520.1 MGP_NODShiLtJ_G0015661.1 mouse_genomes_project X 167100514 167166559 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018521.1 MGP_NODShiLtJ_G0015661.1 mouse_genomes_project X 167100969 167166559 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018522.1 MGP_NODShiLtJ_G0015661.1 mouse_genomes_project X 167100969 167142694 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018523.1 MGP_NODShiLtJ_G0015661.1 mouse_genomes_project X 167101783 167118651 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018524.1 MGP_NODShiLtJ_G0015661.1 mouse_genomes_project X 167142244 167166559 + processed_transcript processed_transcript MGP_NODShiLtJ_T0097430.1 MGP_NODShiLtJ_G0036006.1 mouse_genomes_project X 176788861 176829998 + MGP_NODShiLtJ_P0097430 Rs1 protein_coding protein_coding MGP_NODShiLtJ_T0097431.1 MGP_NODShiLtJ_G0036006.1 mouse_genomes_project X 176789028 176824321 + MGP_NODShiLtJ_P0097431 Rs1 protein_coding protein_coding MGP_NODShiLtJ_T0097435.1 MGP_NODShiLtJ_G0036006.1 mouse_genomes_project X 176820795 176824816 + Rs1 protein_coding processed_transcript MGP_NODShiLtJ_T0009280.1 MGP_NODShiLtJ_G0007446.1 mouse_genomes_project X 5905444 5916337 - Gm10489 lincRNA lincRNA MGP_NODShiLtJ_T0095148.1 MGP_NODShiLtJ_G0035349.1 mouse_genomes_project X 4032460 4033293 + MGP_NODShiLtJ_P0095148 protein_coding protein_coding MGP_NODShiLtJ_T0095503.1 MGP_NODShiLtJ_G0035468.1 mouse_genomes_project X 42522915 42525743 - MGP_NODShiLtJ_P0095503 Dcaf12l2 protein_coding protein_coding MGP_NODShiLtJ_T0011047.1 MGP_NODShiLtJ_G0009180.1 mouse_genomes_project X 68079319 68079381 - Mir743 miRNA miRNA MGP_NODShiLtJ_T0100973.1 MGP_NODShiLtJ_G0039367.1 mouse_genomes_project X 150000010 150000125 - Gm25770 snoRNA snoRNA MGP_NODShiLtJ_T0097555.1 MGP_NODShiLtJ_G0036041.1 mouse_genomes_project X 183041240 183064614 - MGP_NODShiLtJ_P0097555 Rab9 protein_coding protein_coding MGP_NODShiLtJ_T0097556.1 MGP_NODShiLtJ_G0036041.1 mouse_genomes_project X 183041737 183064393 - MGP_NODShiLtJ_P0097556 Rab9 protein_coding protein_coding MGP_NODShiLtJ_T0097557.1 MGP_NODShiLtJ_G0036041.1 mouse_genomes_project X 183042122 183060242 - MGP_NODShiLtJ_P0097557 Rab9 protein_coding protein_coding MGP_NODShiLtJ_T0009312.1 MGP_NODShiLtJ_G0007468.1 mouse_genomes_project X 84533982 84536416 - Gm26775 lincRNA lincRNA MGP_NODShiLtJ_T0005520.1 MGP_NODShiLtJ_G0004648.1 mouse_genomes_project X 51820657 51864681 + A630012P03Rik antisense antisense MGP_NODShiLtJ_T0005521.1 MGP_NODShiLtJ_G0004648.1 mouse_genomes_project X 51820657 51864681 + A630012P03Rik antisense antisense MGP_NODShiLtJ_T0016619.1 MGP_NODShiLtJ_G0014727.1 mouse_genomes_project X 149418391 149419020 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095653.1 MGP_NODShiLtJ_G0035524.1 mouse_genomes_project X 56309178 56314714 - MGP_NODShiLtJ_P0095653 Gm648 protein_coding protein_coding MGP_NODShiLtJ_T0098131.1 MGP_NODShiLtJ_G0036543.1 mouse_genomes_project X 110158432 110158533 + Gm24509 rRNA rRNA MGP_NODShiLtJ_T0016360.1 MGP_NODShiLtJ_G0014468.1 mouse_genomes_project X 90818297 90820937 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095626.1 MGP_NODShiLtJ_G0035510.1 mouse_genomes_project X 52570555 52599310 - MGP_NODShiLtJ_P0095626 Fam122b protein_coding protein_coding MGP_NODShiLtJ_T0095627.1 MGP_NODShiLtJ_G0035510.1 mouse_genomes_project X 52570565 52598525 - MGP_NODShiLtJ_P0095627 Fam122b protein_coding protein_coding MGP_NODShiLtJ_T0095628.1 MGP_NODShiLtJ_G0035510.1 mouse_genomes_project X 52572545 52599303 - MGP_NODShiLtJ_P0095628 Fam122b protein_coding protein_coding MGP_NODShiLtJ_T0095629.1 MGP_NODShiLtJ_G0035510.1 mouse_genomes_project X 52573663 52599310 - Fam122b protein_coding processed_transcript MGP_NODShiLtJ_T0102270.1 MGP_NODShiLtJ_G0040436.1 mouse_genomes_project X 110113702 110151613 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016211.1 MGP_NODShiLtJ_G0014319.1 mouse_genomes_project X 53017804 53018434 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009300.1 MGP_NODShiLtJ_G0007460.1 mouse_genomes_project X 52365495 52366917 - Gm28730 lincRNA lincRNA MGP_NODShiLtJ_T0009301.1 MGP_NODShiLtJ_G0007460.1 mouse_genomes_project X 52365503 52366901 - Gm28730 lincRNA lincRNA MGP_NODShiLtJ_T0009302.1 MGP_NODShiLtJ_G0007460.1 mouse_genomes_project X 52365608 52367461 - Gm28730 lincRNA lincRNA MGP_NODShiLtJ_T0095646.1 MGP_NODShiLtJ_G0035523.1 mouse_genomes_project X 56210662 56271032 + Ddx26b protein_coding processed_transcript MGP_NODShiLtJ_T0095647.1 MGP_NODShiLtJ_G0035523.1 mouse_genomes_project X 56210682 56271031 + MGP_NODShiLtJ_P0095647 Ddx26b protein_coding protein_coding MGP_NODShiLtJ_T0095648.1 MGP_NODShiLtJ_G0035523.1 mouse_genomes_project X 56210685 56258920 + MGP_NODShiLtJ_P0095648 Ddx26b protein_coding protein_coding MGP_NODShiLtJ_T0095649.1 MGP_NODShiLtJ_G0035523.1 mouse_genomes_project X 56210690 56271035 + MGP_NODShiLtJ_P0095649 Ddx26b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0095650.1 MGP_NODShiLtJ_G0035523.1 mouse_genomes_project X 56210690 56271032 + MGP_NODShiLtJ_P0095650 Ddx26b protein_coding protein_coding MGP_NODShiLtJ_T0095651.1 MGP_NODShiLtJ_G0035523.1 mouse_genomes_project X 56242591 56271030 + MGP_NODShiLtJ_P0095651 Ddx26b protein_coding protein_coding MGP_NODShiLtJ_T0095652.1 MGP_NODShiLtJ_G0035523.1 mouse_genomes_project X 56268266 56270877 + MGP_NODShiLtJ_P0095652 Ddx26b protein_coding protein_coding MGP_NODShiLtJ_T0016596.1 MGP_NODShiLtJ_G0014704.1 mouse_genomes_project X 144271941 144272884 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016760.1 MGP_NODShiLtJ_G0014868.1 mouse_genomes_project X 178975682 179028137 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097474.1 MGP_NODShiLtJ_G0036018.1 mouse_genomes_project X 179794560 179836989 - MGP_NODShiLtJ_P0097474 Grpr protein_coding protein_coding MGP_NODShiLtJ_T0101217.1 MGP_NODShiLtJ_G0039516.1 mouse_genomes_project X 10692406 10693288 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101218.1 MGP_NODShiLtJ_G0039516.1 mouse_genomes_project X 10692653 10693202 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0016218.1 MGP_NODShiLtJ_G0014326.1 mouse_genomes_project X 55503400 55503967 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096215.1 MGP_NODShiLtJ_G0035649.1 mouse_genomes_project X 79083441 79087356 + MGP_NODShiLtJ_P0096215 protein_coding protein_coding MGP_NODShiLtJ_T0016303.1 MGP_NODShiLtJ_G0014411.1 mouse_genomes_project X 77121075 77121824 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102245.1 MGP_NODShiLtJ_G0040411.1 mouse_genomes_project X 57529505 57529649 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099720.1 MGP_NODShiLtJ_G0038114.1 mouse_genomes_project X 179397453 179397560 - Gm22746 snRNA snRNA MGP_NODShiLtJ_T0016600.1 MGP_NODShiLtJ_G0014708.1 mouse_genomes_project X 145536111 145537146 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016457.1 MGP_NODShiLtJ_G0014565.1 mouse_genomes_project X 110636730 110637249 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098140.1 MGP_NODShiLtJ_G0036552.1 mouse_genomes_project X 178393403 178393531 + Gm27490 rRNA rRNA MGP_NODShiLtJ_T0096216.1 MGP_NODShiLtJ_G0035650.1 mouse_genomes_project X 79083448 79087358 + MGP_NODShiLtJ_P0096216 protein_coding protein_coding MGP_NODShiLtJ_T0096411.1 MGP_NODShiLtJ_G0035716.1 mouse_genomes_project X 106734827 106762996 + MGP_NODShiLtJ_P0096411 Tmem28 protein_coding protein_coding MGP_NODShiLtJ_T0094984.1 MGP_NODShiLtJ_G0035310.1 mouse_genomes_project X 2406164 2423238 + MGP_NODShiLtJ_P0094984 Syp protein_coding protein_coding MGP_NODShiLtJ_T0094985.1 MGP_NODShiLtJ_G0035310.1 mouse_genomes_project X 2406331 2414971 + Syp protein_coding retained_intron MGP_NODShiLtJ_T0094986.1 MGP_NODShiLtJ_G0035310.1 mouse_genomes_project X 2406415 2411899 + MGP_NODShiLtJ_P0094986 Syp protein_coding protein_coding MGP_NODShiLtJ_T0094987.1 MGP_NODShiLtJ_G0035310.1 mouse_genomes_project X 2406998 2411888 + Syp protein_coding processed_transcript MGP_NODShiLtJ_T0094988.1 MGP_NODShiLtJ_G0035310.1 mouse_genomes_project X 2407454 2411847 + Syp protein_coding retained_intron MGP_NODShiLtJ_T0094989.1 MGP_NODShiLtJ_G0035310.1 mouse_genomes_project X 2411513 2412638 + Syp protein_coding retained_intron MGP_NODShiLtJ_T0009346.1 MGP_NODShiLtJ_G0007488.1 mouse_genomes_project X 157961061 157973834 + lincRNA lincRNA MGP_NODShiLtJ_T0016380.1 MGP_NODShiLtJ_G0014488.1 mouse_genomes_project X 96330786 96331303 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016616.1 MGP_NODShiLtJ_G0014724.1 mouse_genomes_project X 149387117 149388605 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016774.1 MGP_NODShiLtJ_G0014882.1 mouse_genomes_project X 182626622 182628630 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016098.1 MGP_NODShiLtJ_G0014206.1 mouse_genomes_project X 8262840 8263523 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016142.1 MGP_NODShiLtJ_G0014250.1 mouse_genomes_project X 32595847 32597080 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095145.1 MGP_NODShiLtJ_G0035346.1 mouse_genomes_project X 3816558 3819140 + MGP_NODShiLtJ_P0095145 B630019K06Rik protein_coding protein_coding MGP_NODShiLtJ_T0016758.1 MGP_NODShiLtJ_G0014866.1 mouse_genomes_project X 178859300 178859766 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096720.1 MGP_NODShiLtJ_G0035807.1 mouse_genomes_project X 120932456 120971329 + MGP_NODShiLtJ_P0096720 Tex16 protein_coding protein_coding MGP_NODShiLtJ_T0096721.1 MGP_NODShiLtJ_G0035807.1 mouse_genomes_project X 120932480 120971329 + MGP_NODShiLtJ_P0096721 Tex16 protein_coding protein_coding MGP_NODShiLtJ_T0011024.1 MGP_NODShiLtJ_G0009157.1 mouse_genomes_project X 39554789 39554916 + Gm44490 miRNA miRNA MGP_NODShiLtJ_T0016659.1 MGP_NODShiLtJ_G0014767.1 mouse_genomes_project X 155832814 155833072 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096684.1 MGP_NODShiLtJ_G0035790.1 mouse_genomes_project X 115214037 115269784 + MGP_NODShiLtJ_P0096684 Gpr174 protein_coding protein_coding MGP_NODShiLtJ_T0096685.1 MGP_NODShiLtJ_G0035790.1 mouse_genomes_project X 115214131 115269247 + MGP_NODShiLtJ_P0096685 Gpr174 protein_coding protein_coding MGP_NODShiLtJ_T0096686.1 MGP_NODShiLtJ_G0035790.1 mouse_genomes_project X 115214451 115269247 + MGP_NODShiLtJ_P0096686 Gpr174 protein_coding protein_coding MGP_NODShiLtJ_T0096687.1 MGP_NODShiLtJ_G0035790.1 mouse_genomes_project X 115230017 115259462 + Gpr174 protein_coding processed_transcript MGP_NODShiLtJ_T0096688.1 MGP_NODShiLtJ_G0035790.1 mouse_genomes_project X 115245448 115259593 + Gpr174 protein_coding processed_transcript MGP_NODShiLtJ_T0095371.1 MGP_NODShiLtJ_G0035424.1 mouse_genomes_project X 33712876 33732293 - C330007P06Rik protein_coding retained_intron MGP_NODShiLtJ_T0095372.1 MGP_NODShiLtJ_G0035424.1 mouse_genomes_project X 33726380 33741950 - MGP_NODShiLtJ_P0095372 C330007P06Rik protein_coding protein_coding MGP_NODShiLtJ_T0095373.1 MGP_NODShiLtJ_G0035424.1 mouse_genomes_project X 33726415 33741948 - C330007P06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0095716.1 MGP_NODShiLtJ_G0035542.1 mouse_genomes_project X 60153927 60293294 - MGP_NODShiLtJ_P0095716 Mcf2 protein_coding protein_coding MGP_NODShiLtJ_T0095717.1 MGP_NODShiLtJ_G0035542.1 mouse_genomes_project X 60153927 60252824 - MGP_NODShiLtJ_P0095717 Mcf2 protein_coding protein_coding MGP_NODShiLtJ_T0095718.1 MGP_NODShiLtJ_G0035542.1 mouse_genomes_project X 60153930 60252767 - MGP_NODShiLtJ_P0095718 Mcf2 protein_coding protein_coding MGP_NODShiLtJ_T0016350.1 MGP_NODShiLtJ_G0014458.1 mouse_genomes_project X 89549422 89549625 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016443.1 MGP_NODShiLtJ_G0014551.1 mouse_genomes_project X 108938610 108939491 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016554.1 MGP_NODShiLtJ_G0014662.1 mouse_genomes_project X 127785516 127785962 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095365.1 MGP_NODShiLtJ_G0035420.1 mouse_genomes_project X 33462803 33472538 + MGP_NODShiLtJ_P0095365 Pgrmc1 protein_coding protein_coding MGP_NODShiLtJ_T0098499.1 MGP_NODShiLtJ_G0036893.1 mouse_genomes_project X 678395 757385 - Gm26618 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0016541.1 MGP_NODShiLtJ_G0014649.1 mouse_genomes_project X 124820064 124821267 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097040.1 MGP_NODShiLtJ_G0035915.1 mouse_genomes_project X 153792503 153900021 + MGP_NODShiLtJ_P0097040 Frmpd3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097041.1 MGP_NODShiLtJ_G0035915.1 mouse_genomes_project X 153825403 153858604 + MGP_NODShiLtJ_P0097041 Frmpd3 protein_coding protein_coding MGP_NODShiLtJ_T0097042.1 MGP_NODShiLtJ_G0035915.1 mouse_genomes_project X 153842974 153859249 + MGP_NODShiLtJ_P0097042 Frmpd3 protein_coding protein_coding MGP_NODShiLtJ_T0016325.1 MGP_NODShiLtJ_G0014433.1 mouse_genomes_project X 80997495 80997741 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096725.1 MGP_NODShiLtJ_G0035809.1 mouse_genomes_project X 121169393 121231966 + MGP_NODShiLtJ_P0096725 Apool protein_coding protein_coding MGP_NODShiLtJ_T0096726.1 MGP_NODShiLtJ_G0035809.1 mouse_genomes_project X 121169407 121204560 + Apool protein_coding retained_intron MGP_NODShiLtJ_T0096727.1 MGP_NODShiLtJ_G0035809.1 mouse_genomes_project X 121169425 121231641 + MGP_NODShiLtJ_P0096727 Apool protein_coding protein_coding MGP_NODShiLtJ_T0097348.1 MGP_NODShiLtJ_G0035989.1 mouse_genomes_project X 172741563 173015258 - MGP_NODShiLtJ_P0097348 Phex protein_coding protein_coding MGP_NODShiLtJ_T0097349.1 MGP_NODShiLtJ_G0035989.1 mouse_genomes_project X 172808289 173015814 - MGP_NODShiLtJ_P0097349 Phex protein_coding protein_coding MGP_NODShiLtJ_T0018508.1 MGP_NODShiLtJ_G0015656.1 mouse_genomes_project X 148179666 148256664 + processed_transcript processed_transcript MGP_NODShiLtJ_T0016707.1 MGP_NODShiLtJ_G0014815.1 mouse_genomes_project X 168031075 168031607 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0095623.1 MGP_NODShiLtJ_G0035509.1 mouse_genomes_project X 52384932 52567252 - MGP_NODShiLtJ_P0095623 Plac1 protein_coding protein_coding MGP_NODShiLtJ_T0095624.1 MGP_NODShiLtJ_G0035509.1 mouse_genomes_project X 52384933 52432955 - MGP_NODShiLtJ_P0095624 Plac1 protein_coding protein_coding MGP_NODShiLtJ_T0095625.1 MGP_NODShiLtJ_G0035509.1 mouse_genomes_project X 52385109 52533376 - MGP_NODShiLtJ_P0095625 Plac1 protein_coding protein_coding MGP_NODShiLtJ_T0018504.1 MGP_NODShiLtJ_G0015654.1 mouse_genomes_project X 147194914 147196815 - B230119M05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016159.1 MGP_NODShiLtJ_G0014267.1 mouse_genomes_project X 37138324 37138753 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016551.1 MGP_NODShiLtJ_G0014659.1 mouse_genomes_project X 127527570 127528559 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0096579.1 MGP_NODShiLtJ_G0035755.1 mouse_genomes_project X 109918654 109925232 + MGP_NODShiLtJ_P0096579 protein_coding protein_coding MGP_NODShiLtJ_T0096580.1 MGP_NODShiLtJ_G0035755.1 mouse_genomes_project X 109921894 109925232 + MGP_NODShiLtJ_P0096580 protein_coding protein_coding MGP_NODShiLtJ_T0096581.1 MGP_NODShiLtJ_G0035755.1 mouse_genomes_project X 109921894 109925232 + MGP_NODShiLtJ_P0096581 protein_coding protein_coding MGP_NODShiLtJ_T0097395.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175532616 175903636 + MGP_NODShiLtJ_P0097395 Sh3kbp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097396.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175532789 175905782 + MGP_NODShiLtJ_P0097396 Sh3kbp1 protein_coding protein_coding MGP_NODShiLtJ_T0097397.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175533057 175842605 + Sh3kbp1 protein_coding retained_intron MGP_NODShiLtJ_T0097398.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175607156 175785789 + MGP_NODShiLtJ_P0097398 Sh3kbp1 protein_coding protein_coding MGP_NODShiLtJ_T0097399.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175618432 175901878 + MGP_NODShiLtJ_P0097399 Sh3kbp1 protein_coding protein_coding MGP_NODShiLtJ_T0097400.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175618432 175901576 + MGP_NODShiLtJ_P0097400 Sh3kbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097401.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175757165 175903373 + MGP_NODShiLtJ_P0097401 Sh3kbp1 protein_coding protein_coding MGP_NODShiLtJ_T0097402.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175757178 175901878 + MGP_NODShiLtJ_P0097402 Sh3kbp1 protein_coding protein_coding MGP_NODShiLtJ_T0097403.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175757659 175903625 + Sh3kbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0097404.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175841378 175901030 + MGP_NODShiLtJ_P0097404 Sh3kbp1 protein_coding protein_coding MGP_NODShiLtJ_T0097405.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175866451 175899663 + Sh3kbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0097406.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175867447 175903626 + Sh3kbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0097407.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175867666 175901878 + Sh3kbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0097408.1 MGP_NODShiLtJ_G0036000.1 mouse_genomes_project X 175867772 175900901 + Sh3kbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0096209.1 MGP_NODShiLtJ_G0035648.1 mouse_genomes_project X 78561768 78662016 - MGP_NODShiLtJ_P0096209 Pls3 protein_coding protein_coding MGP_NODShiLtJ_T0096210.1 MGP_NODShiLtJ_G0035648.1 mouse_genomes_project X 78561777 78607602 - MGP_NODShiLtJ_P0096210 Pls3 protein_coding protein_coding MGP_NODShiLtJ_T0096211.1 MGP_NODShiLtJ_G0035648.1 mouse_genomes_project X 78561777 78661412 - MGP_NODShiLtJ_P0096211 Pls3 protein_coding protein_coding MGP_NODShiLtJ_T0096212.1 MGP_NODShiLtJ_G0035648.1 mouse_genomes_project X 78561782 78624732 - MGP_NODShiLtJ_P0096212 Pls3 protein_coding protein_coding MGP_NODShiLtJ_T0096213.1 MGP_NODShiLtJ_G0035648.1 mouse_genomes_project X 78562885 78624854 - MGP_NODShiLtJ_P0096213 Pls3 protein_coding protein_coding MGP_NODShiLtJ_T0096214.1 MGP_NODShiLtJ_G0035648.1 mouse_genomes_project X 78660251 78661933 - Pls3 protein_coding processed_transcript MGP_NODShiLtJ_T0099686.1 MGP_NODShiLtJ_G0038080.1 mouse_genomes_project X 105640345 105640452 + Gm26000 snRNA snRNA MGP_NODShiLtJ_T0096312.1 MGP_NODShiLtJ_G0035691.1 mouse_genomes_project X 100392099 100395658 + Klhl15 protein_coding processed_transcript MGP_NODShiLtJ_T0096313.1 MGP_NODShiLtJ_G0035691.1 mouse_genomes_project X 100392104 100416955 + MGP_NODShiLtJ_P0096313 Klhl15 protein_coding protein_coding MGP_NODShiLtJ_T0096314.1 MGP_NODShiLtJ_G0035691.1 mouse_genomes_project X 100392427 100418278 + MGP_NODShiLtJ_P0096314 Klhl15 protein_coding protein_coding MGP_NODShiLtJ_T0096315.1 MGP_NODShiLtJ_G0035691.1 mouse_genomes_project X 100392430 100448859 + MGP_NODShiLtJ_P0096315 Klhl15 protein_coding protein_coding MGP_NODShiLtJ_T0096316.1 MGP_NODShiLtJ_G0035691.1 mouse_genomes_project X 100392490 100448088 + Klhl15 protein_coding retained_intron MGP_NODShiLtJ_T0096317.1 MGP_NODShiLtJ_G0035691.1 mouse_genomes_project X 100392490 100418282 + MGP_NODShiLtJ_P0096317 Klhl15 protein_coding protein_coding MGP_NODShiLtJ_T0096318.1 MGP_NODShiLtJ_G0035691.1 mouse_genomes_project X 100392811 100448853 + MGP_NODShiLtJ_P0096318 Klhl15 protein_coding protein_coding MGP_NODShiLtJ_T0096319.1 MGP_NODShiLtJ_G0035691.1 mouse_genomes_project X 100393311 100453416 + MGP_NODShiLtJ_P0096319 Klhl15 protein_coding protein_coding MGP_NODShiLtJ_T0102250.1 MGP_NODShiLtJ_G0040416.1 mouse_genomes_project X 77622848 77622986 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0018443.1 MGP_NODShiLtJ_G0015636.1 mouse_genomes_project X 2934212 2947672 + Gm6787 processed_transcript processed_transcript MGP_NODShiLtJ_T0095502.1 MGP_NODShiLtJ_G0035467.1 mouse_genomes_project X 41517870 41520243 + MGP_NODShiLtJ_P0095502 Gm362 protein_coding protein_coding MGP_NODShiLtJ_T0016407.1 MGP_NODShiLtJ_G0014515.1 mouse_genomes_project X 101054443 101055859 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016077.1 MGP_NODShiLtJ_G0014185.1 mouse_genomes_project X 3918670 3920711 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016412.1 MGP_NODShiLtJ_G0014520.1 mouse_genomes_project X 101610133 101611116 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060945.1 MGP_NODShiLtJ_G0027133.1 mouse_genomes_project 3 91615986 91684002 + MGP_NODShiLtJ_P0060945 Fam198b protein_coding protein_coding MGP_NODShiLtJ_T0060946.1 MGP_NODShiLtJ_G0027133.1 mouse_genomes_project 3 91616050 91671365 + MGP_NODShiLtJ_P0060946 Fam198b protein_coding protein_coding MGP_NODShiLtJ_T0060947.1 MGP_NODShiLtJ_G0027133.1 mouse_genomes_project 3 91616384 91617614 + MGP_NODShiLtJ_P0060947 Fam198b protein_coding protein_coding MGP_NODShiLtJ_T0060948.1 MGP_NODShiLtJ_G0027133.1 mouse_genomes_project 3 91617300 91684002 + MGP_NODShiLtJ_P0060948 Fam198b protein_coding protein_coding MGP_NODShiLtJ_T0060949.1 MGP_NODShiLtJ_G0027133.1 mouse_genomes_project 3 91617426 91621022 + Fam198b protein_coding retained_intron MGP_NODShiLtJ_T0099189.1 MGP_NODShiLtJ_G0037583.1 mouse_genomes_project 3 98673141 98673252 + Gm23025 snRNA snRNA MGP_NODShiLtJ_T0061843.1 MGP_NODShiLtJ_G0027345.1 mouse_genomes_project 3 106610828 106611342 + MGP_NODShiLtJ_P0061843 protein_coding protein_coding MGP_NODShiLtJ_T0014012.1 MGP_NODShiLtJ_G0012120.1 mouse_genomes_project 3 89708292 89709232 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014081.1 MGP_NODShiLtJ_G0012189.1 mouse_genomes_project 3 113368064 113368319 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001295.1 MGP_NODShiLtJ_G0001216.1 mouse_genomes_project 3 146585225 146587803 - TEC TEC MGP_NODShiLtJ_T0013879.1 MGP_NODShiLtJ_G0011987.1 mouse_genomes_project 3 40590502 40591164 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061782.1 MGP_NODShiLtJ_G0027294.1 mouse_genomes_project 3 103851442 103855800 + MGP_NODShiLtJ_P0061782 S100a7a protein_coding protein_coding MGP_NODShiLtJ_T0061755.1 MGP_NODShiLtJ_G0027286.1 mouse_genomes_project 3 103704239 103705613 + MGP_NODShiLtJ_P0061755 S100a14 protein_coding protein_coding MGP_NODShiLtJ_T0061756.1 MGP_NODShiLtJ_G0027286.1 mouse_genomes_project 3 103704250 103706220 + MGP_NODShiLtJ_P0061756 S100a14 protein_coding protein_coding MGP_NODShiLtJ_T0061757.1 MGP_NODShiLtJ_G0027286.1 mouse_genomes_project 3 103704253 103706220 + MGP_NODShiLtJ_P0061757 S100a14 protein_coding protein_coding MGP_NODShiLtJ_T0061758.1 MGP_NODShiLtJ_G0027286.1 mouse_genomes_project 3 103704255 103706209 + S100a14 protein_coding retained_intron MGP_NODShiLtJ_T0011432.1 MGP_NODShiLtJ_G0009565.1 mouse_genomes_project 3 90472245 90472588 + Gm24749 misc_RNA misc_RNA MGP_NODShiLtJ_T0001199.1 MGP_NODShiLtJ_G0001120.1 mouse_genomes_project 3 66431585 66433116 + TEC TEC MGP_NODShiLtJ_T0013911.1 MGP_NODShiLtJ_G0012019.1 mouse_genomes_project 3 55646366 55646928 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060804.1 MGP_NODShiLtJ_G0027100.1 mouse_genomes_project 3 76398013 77189508 + MGP_NODShiLtJ_P0060804 Gm21949 protein_coding protein_coding MGP_NODShiLtJ_T0061825.1 MGP_NODShiLtJ_G0027328.1 mouse_genomes_project 3 106275711 106277418 - MGP_NODShiLtJ_P0061825 Lce1a2 protein_coding protein_coding MGP_NODShiLtJ_T0100436.1 MGP_NODShiLtJ_G0038830.1 mouse_genomes_project 3 17520777 17520921 - Gm24963 snoRNA snoRNA MGP_NODShiLtJ_T0098339.1 MGP_NODShiLtJ_G0036744.1 mouse_genomes_project 3 118325459 118327499 + Gm43061 sense_intronic sense_intronic MGP_NODShiLtJ_T0101333.1 MGP_NODShiLtJ_G0039574.1 mouse_genomes_project 3 65908894 65912509 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101334.1 MGP_NODShiLtJ_G0039574.1 mouse_genomes_project 3 65910629 65934537 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0004325.1 MGP_NODShiLtJ_G0003772.1 mouse_genomes_project 3 156114582 156117038 - 4930539J05Rik antisense antisense MGP_NODShiLtJ_T0004326.1 MGP_NODShiLtJ_G0003772.1 mouse_genomes_project 3 156114599 156116133 - 4930539J05Rik antisense antisense MGP_NODShiLtJ_T0061823.1 MGP_NODShiLtJ_G0027326.1 mouse_genomes_project 3 106245972 106247740 - MGP_NODShiLtJ_P0061823 Lce1a1 protein_coding protein_coding MGP_NODShiLtJ_T0060462.1 MGP_NODShiLtJ_G0027018.1 mouse_genomes_project 3 59904920 59924248 + MGP_NODShiLtJ_P0060462 Proser1 protein_coding protein_coding MGP_NODShiLtJ_T0060463.1 MGP_NODShiLtJ_G0027018.1 mouse_genomes_project 3 59905061 59906001 + Proser1 protein_coding retained_intron MGP_NODShiLtJ_T0060464.1 MGP_NODShiLtJ_G0027018.1 mouse_genomes_project 3 59905186 59915467 + Proser1 protein_coding retained_intron MGP_NODShiLtJ_T0060465.1 MGP_NODShiLtJ_G0027018.1 mouse_genomes_project 3 59920620 59922413 + Proser1 protein_coding retained_intron MGP_NODShiLtJ_T0007421.1 MGP_NODShiLtJ_G0006075.1 mouse_genomes_project 3 24687102 24756899 + 4930412E21Rik lincRNA lincRNA MGP_NODShiLtJ_T0101875.1 MGP_NODShiLtJ_G0040043.1 mouse_genomes_project 3 104058523 104060406 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014245.1 MGP_NODShiLtJ_G0012353.1 mouse_genomes_project 3 175245148 175245626 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099166.1 MGP_NODShiLtJ_G0037560.1 mouse_genomes_project 3 55804265 55804372 + Gm23096 snRNA snRNA MGP_NODShiLtJ_T0060490.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302723 61328367 + MGP_NODShiLtJ_P0060490 Supt20 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060491.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302728 61341937 + MGP_NODShiLtJ_P0060491 Supt20 protein_coding protein_coding MGP_NODShiLtJ_T0060492.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302744 61342063 + MGP_NODShiLtJ_P0060492 Supt20 protein_coding protein_coding MGP_NODShiLtJ_T0060493.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302744 61342063 + MGP_NODShiLtJ_P0060493 Supt20 protein_coding protein_coding MGP_NODShiLtJ_T0060494.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302746 61342067 + MGP_NODShiLtJ_P0060494 Supt20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060495.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302756 61318734 + MGP_NODShiLtJ_P0060495 Supt20 protein_coding protein_coding MGP_NODShiLtJ_T0060496.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302779 61324604 + Supt20 protein_coding retained_intron MGP_NODShiLtJ_T0060497.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302779 61305134 + Supt20 protein_coding retained_intron MGP_NODShiLtJ_T0060498.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302779 61306098 + Supt20 protein_coding retained_intron MGP_NODShiLtJ_T0060499.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61302783 61318965 + MGP_NODShiLtJ_P0060499 Supt20 protein_coding protein_coding MGP_NODShiLtJ_T0060500.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61303026 61328687 + MGP_NODShiLtJ_P0060500 Supt20 protein_coding protein_coding MGP_NODShiLtJ_T0060501.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61303034 61342064 + MGP_NODShiLtJ_P0060501 Supt20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060502.1 MGP_NODShiLtJ_G0027024.1 mouse_genomes_project 3 61324089 61326202 + Supt20 protein_coding retained_intron MGP_NODShiLtJ_T0014165.1 MGP_NODShiLtJ_G0012273.1 mouse_genomes_project 3 141634653 141635113 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007684.1 MGP_NODShiLtJ_G0006281.1 mouse_genomes_project 3 165717262 165719181 + Gm42706 lincRNA lincRNA MGP_NODShiLtJ_T0007612.1 MGP_NODShiLtJ_G0006223.1 mouse_genomes_project 3 136037512 136043401 + 4921521D15Rik lincRNA lincRNA MGP_NODShiLtJ_T0014047.1 MGP_NODShiLtJ_G0012155.1 mouse_genomes_project 3 105832023 105832160 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062413.1 MGP_NODShiLtJ_G0027481.1 mouse_genomes_project 3 114526692 114602145 + Spag17 protein_coding processed_transcript MGP_NODShiLtJ_T0062414.1 MGP_NODShiLtJ_G0027481.1 mouse_genomes_project 3 114526703 114812525 + MGP_NODShiLtJ_P0062414 Spag17 protein_coding protein_coding MGP_NODShiLtJ_T0062415.1 MGP_NODShiLtJ_G0027481.1 mouse_genomes_project 3 114677529 114683313 + Spag17 protein_coding retained_intron MGP_NODShiLtJ_T0062416.1 MGP_NODShiLtJ_G0027481.1 mouse_genomes_project 3 114683256 114695623 + Spag17 protein_coding retained_intron MGP_NODShiLtJ_T0060302.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43992684 44013299 + MGP_NODShiLtJ_P0060302 Plk4 protein_coding protein_coding MGP_NODShiLtJ_T0060303.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43992693 44001623 + Plk4 protein_coding retained_intron MGP_NODShiLtJ_T0060304.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43992707 43994289 + Plk4 protein_coding retained_intron MGP_NODShiLtJ_T0060305.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43992707 44010805 + MGP_NODShiLtJ_P0060305 Plk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060306.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43992715 43998709 + Plk4 protein_coding retained_intron MGP_NODShiLtJ_T0060307.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43992719 44013299 + MGP_NODShiLtJ_P0060307 Plk4 protein_coding protein_coding MGP_NODShiLtJ_T0060308.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43992919 44010677 + MGP_NODShiLtJ_P0060308 Plk4 protein_coding protein_coding MGP_NODShiLtJ_T0060309.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43993446 43997657 + MGP_NODShiLtJ_P0060309 Plk4 protein_coding protein_coding MGP_NODShiLtJ_T0060310.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 43994128 43994710 + Plk4 protein_coding retained_intron MGP_NODShiLtJ_T0060311.1 MGP_NODShiLtJ_G0026993.1 mouse_genomes_project 3 44006997 44013298 + MGP_NODShiLtJ_P0060311 Plk4 protein_coding protein_coding MGP_NODShiLtJ_T0101114.1 MGP_NODShiLtJ_G0039458.1 mouse_genomes_project 3 73743427 73765763 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101115.1 MGP_NODShiLtJ_G0039458.1 mouse_genomes_project 3 73744861 73745335 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101116.1 MGP_NODShiLtJ_G0039458.1 mouse_genomes_project 3 73751536 73766950 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101117.1 MGP_NODShiLtJ_G0039458.1 mouse_genomes_project 3 73765067 73766792 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101118.1 MGP_NODShiLtJ_G0039458.1 mouse_genomes_project 3 73765101 73766958 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0063665.1 MGP_NODShiLtJ_G0027736.1 mouse_genomes_project 3 159018617 159038071 - MGP_NODShiLtJ_P0063665 Gm5105 protein_coding protein_coding MGP_NODShiLtJ_T0001329.1 MGP_NODShiLtJ_G0001249.1 mouse_genomes_project 3 156103569 156106263 - TEC TEC MGP_NODShiLtJ_T0061795.1 MGP_NODShiLtJ_G0027303.1 mouse_genomes_project 3 105623831 105631557 - MGP_NODShiLtJ_P0061795 Lelp1 protein_coding protein_coding MGP_NODShiLtJ_T0099178.1 MGP_NODShiLtJ_G0037572.1 mouse_genomes_project 3 73763296 73763389 + Gm22279 snRNA snRNA MGP_NODShiLtJ_T0060002.1 MGP_NODShiLtJ_G0026939.1 mouse_genomes_project 3 33012670 33034300 - MGP_NODShiLtJ_P0060002 Lrrc31 protein_coding protein_coding MGP_NODShiLtJ_T0060003.1 MGP_NODShiLtJ_G0026939.1 mouse_genomes_project 3 33016289 33034313 - MGP_NODShiLtJ_P0060003 Lrrc31 protein_coding protein_coding MGP_NODShiLtJ_T0060004.1 MGP_NODShiLtJ_G0026939.1 mouse_genomes_project 3 33032416 33034238 - Lrrc31 protein_coding retained_intron MGP_NODShiLtJ_T0060005.1 MGP_NODShiLtJ_G0026939.1 mouse_genomes_project 3 33032591 33034280 - Lrrc31 protein_coding processed_transcript MGP_NODShiLtJ_T0014147.1 MGP_NODShiLtJ_G0012255.1 mouse_genomes_project 3 134697931 134698316 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001339.1 MGP_NODShiLtJ_G0001259.1 mouse_genomes_project 3 165580138 165586679 + TEC TEC MGP_NODShiLtJ_T0013956.1 MGP_NODShiLtJ_G0012064.1 mouse_genomes_project 3 68880849 68881344 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063807.1 MGP_NODShiLtJ_G0027766.1 mouse_genomes_project 3 166678003 166717891 - MGP_NODShiLtJ_P0063807 Sh3glb1 protein_coding protein_coding MGP_NODShiLtJ_T0063808.1 MGP_NODShiLtJ_G0027766.1 mouse_genomes_project 3 166679220 166695256 - MGP_NODShiLtJ_P0063808 Sh3glb1 protein_coding protein_coding MGP_NODShiLtJ_T0063809.1 MGP_NODShiLtJ_G0027766.1 mouse_genomes_project 3 166681236 166718104 - MGP_NODShiLtJ_P0063809 Sh3glb1 protein_coding protein_coding MGP_NODShiLtJ_T0063810.1 MGP_NODShiLtJ_G0027766.1 mouse_genomes_project 3 166683873 166718116 - MGP_NODShiLtJ_P0063810 Sh3glb1 protein_coding protein_coding MGP_NODShiLtJ_T0063811.1 MGP_NODShiLtJ_G0027766.1 mouse_genomes_project 3 166686375 166717986 - MGP_NODShiLtJ_P0063811 Sh3glb1 protein_coding protein_coding MGP_NODShiLtJ_T0063812.1 MGP_NODShiLtJ_G0027766.1 mouse_genomes_project 3 166689770 166704414 - MGP_NODShiLtJ_P0063812 Sh3glb1 protein_coding protein_coding MGP_NODShiLtJ_T0001185.1 MGP_NODShiLtJ_G0001106.1 mouse_genomes_project 3 59954263 59955454 + TEC TEC MGP_NODShiLtJ_T0001117.1 MGP_NODShiLtJ_G0001040.1 mouse_genomes_project 3 36657257 36658331 - TEC TEC MGP_NODShiLtJ_T0001253.1 MGP_NODShiLtJ_G0001174.1 mouse_genomes_project 3 122129993 122134586 + TEC TEC MGP_NODShiLtJ_T0004311.1 MGP_NODShiLtJ_G0003761.1 mouse_genomes_project 3 146786228 146793084 + Gm16958 antisense antisense MGP_NODShiLtJ_T0004312.1 MGP_NODShiLtJ_G0003761.1 mouse_genomes_project 3 146786262 146792113 + Gm16958 antisense antisense MGP_NODShiLtJ_T0062378.1 MGP_NODShiLtJ_G0027464.1 mouse_genomes_project 3 112399697 112490051 + Notch2 protein_coding retained_intron MGP_NODShiLtJ_T0062379.1 MGP_NODShiLtJ_G0027464.1 mouse_genomes_project 3 112399708 112543392 + MGP_NODShiLtJ_P0062379 Notch2 protein_coding protein_coding MGP_NODShiLtJ_T0101128.1 MGP_NODShiLtJ_G0039464.1 mouse_genomes_project 3 147134195 147135191 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0062786.1 MGP_NODShiLtJ_G0027569.1 mouse_genomes_project 3 123134900 123136450 - Strip1 protein_coding retained_intron MGP_NODShiLtJ_T0062787.1 MGP_NODShiLtJ_G0027569.1 mouse_genomes_project 3 123134900 123154063 - MGP_NODShiLtJ_P0062787 Strip1 protein_coding protein_coding MGP_NODShiLtJ_T0062788.1 MGP_NODShiLtJ_G0027569.1 mouse_genomes_project 3 123134903 123149213 - Strip1 protein_coding processed_transcript MGP_NODShiLtJ_T0062789.1 MGP_NODShiLtJ_G0027569.1 mouse_genomes_project 3 123139262 123142444 - Strip1 protein_coding processed_transcript MGP_NODShiLtJ_T0062790.1 MGP_NODShiLtJ_G0027569.1 mouse_genomes_project 3 123142820 123154063 - Strip1 protein_coding retained_intron MGP_NODShiLtJ_T0062027.1 MGP_NODShiLtJ_G0027388.1 mouse_genomes_project 3 109126492 109132732 + MGP_NODShiLtJ_P0062027 Gm9726 protein_coding protein_coding MGP_NODShiLtJ_T0099227.1 MGP_NODShiLtJ_G0037621.1 mouse_genomes_project 3 158659251 158659356 + Gm25080 snRNA snRNA MGP_NODShiLtJ_T0013799.1 MGP_NODShiLtJ_G0011907.1 mouse_genomes_project 3 9786475 9787229 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063544.1 MGP_NODShiLtJ_G0027714.1 mouse_genomes_project 3 154709103 154735190 + protein_coding processed_transcript MGP_NODShiLtJ_T0063545.1 MGP_NODShiLtJ_G0027714.1 mouse_genomes_project 3 154709110 154737731 + MGP_NODShiLtJ_P0063545 protein_coding protein_coding MGP_NODShiLtJ_T0063546.1 MGP_NODShiLtJ_G0027714.1 mouse_genomes_project 3 154709114 154711004 + protein_coding retained_intron MGP_NODShiLtJ_T0063547.1 MGP_NODShiLtJ_G0027714.1 mouse_genomes_project 3 154709439 154733801 + MGP_NODShiLtJ_P0063547 protein_coding protein_coding MGP_NODShiLtJ_T0063548.1 MGP_NODShiLtJ_G0027714.1 mouse_genomes_project 3 154714350 154720668 + protein_coding retained_intron MGP_NODShiLtJ_T0062373.1 MGP_NODShiLtJ_G0027463.1 mouse_genomes_project 3 112282185 112304315 + MGP_NODShiLtJ_P0062373 Sec22b protein_coding protein_coding MGP_NODShiLtJ_T0062374.1 MGP_NODShiLtJ_G0027463.1 mouse_genomes_project 3 112282211 112302887 + MGP_NODShiLtJ_P0062374 Sec22b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062375.1 MGP_NODShiLtJ_G0027463.1 mouse_genomes_project 3 112282220 112288669 + MGP_NODShiLtJ_P0062375 Sec22b protein_coding protein_coding MGP_NODShiLtJ_T0062376.1 MGP_NODShiLtJ_G0027463.1 mouse_genomes_project 3 112282222 112296213 + MGP_NODShiLtJ_P0062376 Sec22b protein_coding protein_coding MGP_NODShiLtJ_T0062377.1 MGP_NODShiLtJ_G0027463.1 mouse_genomes_project 3 112287958 112288669 + Sec22b protein_coding processed_transcript MGP_NODShiLtJ_T0004157.1 MGP_NODShiLtJ_G0003657.1 mouse_genomes_project 3 33137260 33138231 - 4933429H19Rik antisense antisense MGP_NODShiLtJ_T0004158.1 MGP_NODShiLtJ_G0003657.1 mouse_genomes_project 3 33137804 33138227 - 4933429H19Rik antisense antisense MGP_NODShiLtJ_T0059881.1 MGP_NODShiLtJ_G0026917.1 mouse_genomes_project 3 21145304 21200820 - MGP_NODShiLtJ_P0059881 Agtr1b protein_coding protein_coding MGP_NODShiLtJ_T0059882.1 MGP_NODShiLtJ_G0026917.1 mouse_genomes_project 3 21145866 21200767 - MGP_NODShiLtJ_P0059882 Agtr1b protein_coding protein_coding MGP_NODShiLtJ_T0059749.1 MGP_NODShiLtJ_G0026880.1 mouse_genomes_project 3 8965263 8984747 - MGP_NODShiLtJ_P0059749 Impa1 protein_coding protein_coding MGP_NODShiLtJ_T0059750.1 MGP_NODShiLtJ_G0026880.1 mouse_genomes_project 3 8967261 8984747 - MGP_NODShiLtJ_P0059750 Impa1 protein_coding protein_coding MGP_NODShiLtJ_T0059751.1 MGP_NODShiLtJ_G0026880.1 mouse_genomes_project 3 8968425 8969960 - Impa1 protein_coding retained_intron MGP_NODShiLtJ_T0059752.1 MGP_NODShiLtJ_G0026880.1 mouse_genomes_project 3 8968493 8984942 - MGP_NODShiLtJ_P0059752 Impa1 protein_coding protein_coding MGP_NODShiLtJ_T0059754.1 MGP_NODShiLtJ_G0026880.1 mouse_genomes_project 3 8979489 8984440 - MGP_NODShiLtJ_P0059754 Impa1 protein_coding protein_coding MGP_NODShiLtJ_T0098156.1 MGP_NODShiLtJ_G0036568.1 mouse_genomes_project 3 23275466 23275756 + Rprl2 ribozyme ribozyme MGP_NODShiLtJ_T0013974.1 MGP_NODShiLtJ_G0012082.1 mouse_genomes_project 3 75219791 75220580 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001085.1 MGP_NODShiLtJ_G0001008.1 mouse_genomes_project 3 8883797 8884294 + TEC TEC MGP_NODShiLtJ_T0061672.1 MGP_NODShiLtJ_G0027269.1 mouse_genomes_project 3 103193987 103335482 + MGP_NODShiLtJ_P0061672 Nup210l protein_coding protein_coding MGP_NODShiLtJ_T0061673.1 MGP_NODShiLtJ_G0027269.1 mouse_genomes_project 3 103193989 103335513 + MGP_NODShiLtJ_P0061673 Nup210l protein_coding protein_coding MGP_NODShiLtJ_T0064083.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177364745 177369770 - MGP_NODShiLtJ_P0064083 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064084.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177364747 177370468 - MGP_NODShiLtJ_P0064084 Rabggtb protein_coding protein_coding MGP_NODShiLtJ_T0064085.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177364747 177369604 - MGP_NODShiLtJ_P0064085 Rabggtb protein_coding protein_coding MGP_NODShiLtJ_T0064086.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177364749 177370386 - MGP_NODShiLtJ_P0064086 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064087.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177364751 177370452 - MGP_NODShiLtJ_P0064087 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064088.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177364912 177369540 - MGP_NODShiLtJ_P0064088 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064089.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177365030 177369540 - MGP_NODShiLtJ_P0064089 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064090.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177365030 177369540 - MGP_NODShiLtJ_P0064090 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064091.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177365030 177369540 - MGP_NODShiLtJ_P0064091 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064092.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177365533 177369492 - MGP_NODShiLtJ_P0064092 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064093.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177366872 177370414 - MGP_NODShiLtJ_P0064093 Rabggtb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064094.1 MGP_NODShiLtJ_G0027815.1 mouse_genomes_project 3 177369444 177370390 - Rabggtb protein_coding processed_transcript MGP_NODShiLtJ_T0013818.1 MGP_NODShiLtJ_G0011926.1 mouse_genomes_project 3 15965863 15966924 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007695.1 MGP_NODShiLtJ_G0006290.1 mouse_genomes_project 3 169459502 169491403 + Gm29771 lincRNA lincRNA MGP_NODShiLtJ_T0062603.1 MGP_NODShiLtJ_G0027520.1 mouse_genomes_project 3 118969554 119023069 + MGP_NODShiLtJ_P0062603 Rsbn1 protein_coding protein_coding MGP_NODShiLtJ_T0062604.1 MGP_NODShiLtJ_G0027520.1 mouse_genomes_project 3 118969585 119023092 + MGP_NODShiLtJ_P0062604 Rsbn1 protein_coding protein_coding MGP_NODShiLtJ_T0062605.1 MGP_NODShiLtJ_G0027520.1 mouse_genomes_project 3 118970001 119020326 + MGP_NODShiLtJ_P0062605 Rsbn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062606.1 MGP_NODShiLtJ_G0027520.1 mouse_genomes_project 3 118983063 119016591 + MGP_NODShiLtJ_P0062606 Rsbn1 protein_coding protein_coding MGP_NODShiLtJ_T0061137.1 MGP_NODShiLtJ_G0027181.1 mouse_genomes_project 3 100432673 100444316 - MGP_NODShiLtJ_P0061137 Lrrc71 protein_coding protein_coding MGP_NODShiLtJ_T0061138.1 MGP_NODShiLtJ_G0027181.1 mouse_genomes_project 3 100433645 100444318 - Lrrc71 protein_coding retained_intron MGP_NODShiLtJ_T0061139.1 MGP_NODShiLtJ_G0027181.1 mouse_genomes_project 3 100433696 100434323 - Lrrc71 protein_coding processed_transcript MGP_NODShiLtJ_T0061140.1 MGP_NODShiLtJ_G0027181.1 mouse_genomes_project 3 100434736 100436797 - MGP_NODShiLtJ_P0061140 Lrrc71 protein_coding protein_coding MGP_NODShiLtJ_T0061141.1 MGP_NODShiLtJ_G0027181.1 mouse_genomes_project 3 100434831 100444157 - MGP_NODShiLtJ_P0061141 Lrrc71 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061142.1 MGP_NODShiLtJ_G0027181.1 mouse_genomes_project 3 100440977 100444287 - Lrrc71 protein_coding retained_intron MGP_NODShiLtJ_T0004201.1 MGP_NODShiLtJ_G0003689.1 mouse_genomes_project 3 73334686 73516688 - antisense antisense MGP_NODShiLtJ_T0004202.1 MGP_NODShiLtJ_G0003689.1 mouse_genomes_project 3 73508301 73516660 - antisense antisense MGP_NODShiLtJ_T0001337.1 MGP_NODShiLtJ_G0001257.1 mouse_genomes_project 3 160034839 160036615 - TEC TEC MGP_NODShiLtJ_T0017802.1 MGP_NODShiLtJ_G0015370.1 mouse_genomes_project 3 49818142 49969455 - processed_transcript lincRNA MGP_NODShiLtJ_T0017803.1 MGP_NODShiLtJ_G0015370.1 mouse_genomes_project 3 49819055 49954128 - processed_transcript lincRNA MGP_NODShiLtJ_T0017804.1 MGP_NODShiLtJ_G0015370.1 mouse_genomes_project 3 49888192 49969400 - processed_transcript retained_intron MGP_NODShiLtJ_T0001250.1 MGP_NODShiLtJ_G0001171.1 mouse_genomes_project 3 119856703 119861141 + TEC TEC MGP_NODShiLtJ_T0004231.1 MGP_NODShiLtJ_G0003711.1 mouse_genomes_project 3 105601632 105607758 + Gm43735 antisense antisense MGP_NODShiLtJ_T0063610.1 MGP_NODShiLtJ_G0027724.1 mouse_genomes_project 3 156532161 156604613 + MGP_NODShiLtJ_P0063610 Slc39a8 protein_coding protein_coding MGP_NODShiLtJ_T0063611.1 MGP_NODShiLtJ_G0027724.1 mouse_genomes_project 3 156532536 156575441 + Slc39a8 protein_coding retained_intron MGP_NODShiLtJ_T0063612.1 MGP_NODShiLtJ_G0027724.1 mouse_genomes_project 3 156532539 156604793 + MGP_NODShiLtJ_P0063612 Slc39a8 protein_coding protein_coding MGP_NODShiLtJ_T0063613.1 MGP_NODShiLtJ_G0027724.1 mouse_genomes_project 3 156532646 156604791 + MGP_NODShiLtJ_P0063613 Slc39a8 protein_coding protein_coding MGP_NODShiLtJ_T0063614.1 MGP_NODShiLtJ_G0027724.1 mouse_genomes_project 3 156532946 156604605 + MGP_NODShiLtJ_P0063614 Slc39a8 protein_coding protein_coding MGP_NODShiLtJ_T0063615.1 MGP_NODShiLtJ_G0027724.1 mouse_genomes_project 3 156600372 156604787 + Slc39a8 protein_coding retained_intron MGP_NODShiLtJ_T0101871.1 MGP_NODShiLtJ_G0040039.1 mouse_genomes_project 3 101660158 101743645 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0061460.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194061 102199411 - MGP_NODShiLtJ_P0061460 Mtx1 protein_coding protein_coding MGP_NODShiLtJ_T0061461.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194066 102195317 - MGP_NODShiLtJ_P0061461 Mtx1 protein_coding protein_coding MGP_NODShiLtJ_T0061462.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194067 102194645 - Mtx1 protein_coding retained_intron MGP_NODShiLtJ_T0061463.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194067 102195075 - Mtx1 protein_coding processed_transcript MGP_NODShiLtJ_T0061464.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194067 102199338 - MGP_NODShiLtJ_P0061464 Mtx1 protein_coding protein_coding MGP_NODShiLtJ_T0061465.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194069 102195102 - MGP_NODShiLtJ_P0061465 Mtx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061466.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194072 102198888 - MGP_NODShiLtJ_P0061466 Mtx1 protein_coding protein_coding MGP_NODShiLtJ_T0061467.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194187 102198874 - MGP_NODShiLtJ_P0061467 Mtx1 protein_coding protein_coding MGP_NODShiLtJ_T0061468.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194193 102198821 - MGP_NODShiLtJ_P0061468 Mtx1 protein_coding protein_coding MGP_NODShiLtJ_T0061469.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194308 102198893 - MGP_NODShiLtJ_P0061469 Mtx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061470.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194336 102213939 - MGP_NODShiLtJ_P0061470 Mtx1 protein_coding protein_coding MGP_NODShiLtJ_T0061471.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194394 102195817 - Mtx1 protein_coding retained_intron MGP_NODShiLtJ_T0061472.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194626 102195704 - Mtx1 protein_coding retained_intron MGP_NODShiLtJ_T0061473.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102194725 102198843 - Mtx1 protein_coding retained_intron MGP_NODShiLtJ_T0061474.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102195012 102198866 - MGP_NODShiLtJ_P0061474 Mtx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061475.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102195240 102198858 - Mtx1 protein_coding retained_intron MGP_NODShiLtJ_T0061476.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102195656 102198807 - MGP_NODShiLtJ_P0061476 Mtx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061483.1 MGP_NODShiLtJ_G0027237.1 mouse_genomes_project 3 102210995 102213975 - Mtx1 protein_coding processed_transcript MGP_NODShiLtJ_T0001215.1 MGP_NODShiLtJ_G0001136.1 mouse_genomes_project 3 86473847 86474360 - TEC TEC MGP_NODShiLtJ_T0098352.1 MGP_NODShiLtJ_G0036757.1 mouse_genomes_project 3 119247608 119248320 - C030032O16Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0061720.1 MGP_NODShiLtJ_G0027279.1 mouse_genomes_project 3 103548376 103594203 - MGP_NODShiLtJ_P0061720 Ints3 protein_coding protein_coding MGP_NODShiLtJ_T0061721.1 MGP_NODShiLtJ_G0027279.1 mouse_genomes_project 3 103548384 103594429 - MGP_NODShiLtJ_P0061721 Ints3 protein_coding protein_coding MGP_NODShiLtJ_T0061722.1 MGP_NODShiLtJ_G0027279.1 mouse_genomes_project 3 103549064 103560261 - Ints3 protein_coding retained_intron MGP_NODShiLtJ_T0061723.1 MGP_NODShiLtJ_G0027279.1 mouse_genomes_project 3 103549064 103594513 - MGP_NODShiLtJ_P0061723 Ints3 protein_coding protein_coding MGP_NODShiLtJ_T0061724.1 MGP_NODShiLtJ_G0027279.1 mouse_genomes_project 3 103551355 103557822 - Ints3 protein_coding retained_intron MGP_NODShiLtJ_T0061725.1 MGP_NODShiLtJ_G0027279.1 mouse_genomes_project 3 103558151 103559721 - Ints3 protein_coding retained_intron MGP_NODShiLtJ_T0061726.1 MGP_NODShiLtJ_G0027279.1 mouse_genomes_project 3 103564995 103594522 - Ints3 protein_coding retained_intron MGP_NODShiLtJ_T0062997.1 MGP_NODShiLtJ_G0027614.1 mouse_genomes_project 3 130562606 130588843 - MGP_NODShiLtJ_P0062997 Amy1 protein_coding protein_coding MGP_NODShiLtJ_T0062998.1 MGP_NODShiLtJ_G0027614.1 mouse_genomes_project 3 130565633 130585806 - MGP_NODShiLtJ_P0062998 Amy1 protein_coding protein_coding MGP_NODShiLtJ_T0062999.1 MGP_NODShiLtJ_G0027614.1 mouse_genomes_project 3 130565829 130572395 - Amy1 protein_coding retained_intron MGP_NODShiLtJ_T0063000.1 MGP_NODShiLtJ_G0027614.1 mouse_genomes_project 3 130573065 130585316 - MGP_NODShiLtJ_P0063000 Amy1 protein_coding protein_coding MGP_NODShiLtJ_T0001139.1 MGP_NODShiLtJ_G0001062.1 mouse_genomes_project 3 44236532 44237455 - TEC TEC MGP_NODShiLtJ_T0061770.1 MGP_NODShiLtJ_G0027289.1 mouse_genomes_project 3 103774875 103776137 + MGP_NODShiLtJ_P0061770 S100a2 protein_coding protein_coding MGP_NODShiLtJ_T0101890.1 MGP_NODShiLtJ_G0040058.1 mouse_genomes_project 3 113364698 113378060 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017814.1 MGP_NODShiLtJ_G0015375.1 mouse_genomes_project 3 94854443 94857324 - Gm29999 processed_transcript retained_intron MGP_NODShiLtJ_T0017815.1 MGP_NODShiLtJ_G0015375.1 mouse_genomes_project 3 94854589 94859853 - Gm29999 processed_transcript lincRNA MGP_NODShiLtJ_T0001348.1 MGP_NODShiLtJ_G0001268.1 mouse_genomes_project 3 175564479 175568603 - TEC TEC MGP_NODShiLtJ_T0014209.1 MGP_NODShiLtJ_G0012317.1 mouse_genomes_project 3 156811652 156813786 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014190.1 MGP_NODShiLtJ_G0012298.1 mouse_genomes_project 3 151481107 151481302 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101855.1 MGP_NODShiLtJ_G0040023.1 mouse_genomes_project 3 66680620 66680885 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0061829.1 MGP_NODShiLtJ_G0027332.1 mouse_genomes_project 3 106328078 106329774 - MGP_NODShiLtJ_P0061829 Lce1f protein_coding protein_coding MGP_NODShiLtJ_T0060048.1 MGP_NODShiLtJ_G0026949.1 mouse_genomes_project 3 34789161 34821399 - MGP_NODShiLtJ_P0060048 Zmat3 protein_coding protein_coding MGP_NODShiLtJ_T0060049.1 MGP_NODShiLtJ_G0026949.1 mouse_genomes_project 3 34789165 34821341 - MGP_NODShiLtJ_P0060049 Zmat3 protein_coding protein_coding MGP_NODShiLtJ_T0060050.1 MGP_NODShiLtJ_G0026949.1 mouse_genomes_project 3 34816788 34821181 - MGP_NODShiLtJ_P0060050 Zmat3 protein_coding protein_coding MGP_NODShiLtJ_T0060051.1 MGP_NODShiLtJ_G0026949.1 mouse_genomes_project 3 34817908 34821735 - Zmat3 protein_coding retained_intron MGP_NODShiLtJ_T0062320.1 MGP_NODShiLtJ_G0027452.1 mouse_genomes_project 3 111126529 111164887 - MGP_NODShiLtJ_P0062320 Gpr89 protein_coding protein_coding MGP_NODShiLtJ_T0062321.1 MGP_NODShiLtJ_G0027452.1 mouse_genomes_project 3 111126839 111152476 - Gpr89 protein_coding processed_transcript MGP_NODShiLtJ_T0062322.1 MGP_NODShiLtJ_G0027452.1 mouse_genomes_project 3 111129734 111135888 - Gpr89 protein_coding retained_intron MGP_NODShiLtJ_T0062323.1 MGP_NODShiLtJ_G0027452.1 mouse_genomes_project 3 111140273 111158098 - Gpr89 protein_coding processed_transcript MGP_NODShiLtJ_T0062324.1 MGP_NODShiLtJ_G0027452.1 mouse_genomes_project 3 111142176 111156987 - Gpr89 protein_coding processed_transcript MGP_NODShiLtJ_T0062325.1 MGP_NODShiLtJ_G0027452.1 mouse_genomes_project 3 111142176 111164853 - MGP_NODShiLtJ_P0062325 Gpr89 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100472.1 MGP_NODShiLtJ_G0038866.1 mouse_genomes_project 3 103087048 103087184 - Gm24608 snoRNA snoRNA MGP_NODShiLtJ_T0063055.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134412287 134448487 - MGP_NODShiLtJ_P0063055 Trmt13 protein_coding protein_coding MGP_NODShiLtJ_T0063056.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134412288 134426029 - MGP_NODShiLtJ_P0063056 Trmt13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063057.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134412289 134426053 - MGP_NODShiLtJ_P0063057 Trmt13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063058.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134412530 134414671 - Trmt13 protein_coding processed_transcript MGP_NODShiLtJ_T0063059.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134415318 134426080 - Trmt13 protein_coding retained_intron MGP_NODShiLtJ_T0063060.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134417006 134425878 - MGP_NODShiLtJ_P0063060 Trmt13 protein_coding protein_coding MGP_NODShiLtJ_T0063061.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134420762 134425861 - MGP_NODShiLtJ_P0063061 Trmt13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063062.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134423182 134425994 - Trmt13 protein_coding retained_intron MGP_NODShiLtJ_T0063063.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134425151 134426031 - MGP_NODShiLtJ_P0063063 Trmt13 protein_coding protein_coding MGP_NODShiLtJ_T0063068.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134426586 134448021 - Trmt13 protein_coding processed_transcript MGP_NODShiLtJ_T0063070.1 MGP_NODShiLtJ_G0027628.1 mouse_genomes_project 3 134447439 134448308 - Trmt13 protein_coding retained_intron MGP_NODShiLtJ_T0062174.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109946935 109972691 - MGP_NODShiLtJ_P0062174 Prpf3 protein_coding protein_coding MGP_NODShiLtJ_T0062175.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109947400 109952482 - MGP_NODShiLtJ_P0062175 Prpf3 protein_coding protein_coding MGP_NODShiLtJ_T0062176.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109947429 109966171 - Prpf3 protein_coding retained_intron MGP_NODShiLtJ_T0062177.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109947433 109949621 - Prpf3 protein_coding retained_intron MGP_NODShiLtJ_T0062178.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109947433 109972559 - MGP_NODShiLtJ_P0062178 Prpf3 protein_coding protein_coding MGP_NODShiLtJ_T0062179.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109953294 109961764 - Prpf3 protein_coding processed_transcript MGP_NODShiLtJ_T0062180.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109960402 109962773 - Prpf3 protein_coding retained_intron MGP_NODShiLtJ_T0062181.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109964039 109970228 - MGP_NODShiLtJ_P0062181 Prpf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062182.1 MGP_NODShiLtJ_G0027413.1 mouse_genomes_project 3 109966132 109972587 - Prpf3 protein_coding retained_intron MGP_NODShiLtJ_T0061812.1 MGP_NODShiLtJ_G0027317.1 mouse_genomes_project 3 105999448 106001961 - MGP_NODShiLtJ_P0061812 Sprr3 protein_coding protein_coding MGP_NODShiLtJ_T0061794.1 MGP_NODShiLtJ_G0027302.1 mouse_genomes_project 3 105610604 105612331 - MGP_NODShiLtJ_P0061794 Prr9 protein_coding protein_coding MGP_NODShiLtJ_T0007603.1 MGP_NODShiLtJ_G0006215.1 mouse_genomes_project 3 128244884 128551481 + lincRNA lincRNA MGP_NODShiLtJ_T0007468.1 MGP_NODShiLtJ_G0006112.1 mouse_genomes_project 3 44772201 44779406 - Gm43733 lincRNA lincRNA MGP_NODShiLtJ_T0007469.1 MGP_NODShiLtJ_G0006112.1 mouse_genomes_project 3 44773158 44779436 - Gm43733 lincRNA lincRNA MGP_NODShiLtJ_T0007470.1 MGP_NODShiLtJ_G0006112.1 mouse_genomes_project 3 44773241 44774172 - Gm43733 lincRNA lincRNA MGP_NODShiLtJ_T0061589.1 MGP_NODShiLtJ_G0027261.1 mouse_genomes_project 3 102791533 102808421 + MGP_NODShiLtJ_P0061589 Ube2q1 protein_coding protein_coding MGP_NODShiLtJ_T0061590.1 MGP_NODShiLtJ_G0027261.1 mouse_genomes_project 3 102797993 102808413 + MGP_NODShiLtJ_P0061590 Ube2q1 protein_coding protein_coding MGP_NODShiLtJ_T0061591.1 MGP_NODShiLtJ_G0027261.1 mouse_genomes_project 3 102798272 102801832 + Ube2q1 protein_coding retained_intron MGP_NODShiLtJ_T0013775.1 MGP_NODShiLtJ_G0011883.1 mouse_genomes_project 3 2386382 2387348 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001304.1 MGP_NODShiLtJ_G0001225.1 mouse_genomes_project 3 147032312 147035948 - TEC TEC MGP_NODShiLtJ_T0060006.1 MGP_NODShiLtJ_G0026940.1 mouse_genomes_project 3 33088554 33110597 + MGP_NODShiLtJ_P0060006 Samd7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060007.1 MGP_NODShiLtJ_G0026940.1 mouse_genomes_project 3 33088601 33110605 + MGP_NODShiLtJ_P0060007 Samd7 protein_coding protein_coding MGP_NODShiLtJ_T0060008.1 MGP_NODShiLtJ_G0026940.1 mouse_genomes_project 3 33093309 33108926 + MGP_NODShiLtJ_P0060008 Samd7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060009.1 MGP_NODShiLtJ_G0026940.1 mouse_genomes_project 3 33098931 33100172 + Samd7 protein_coding retained_intron MGP_NODShiLtJ_T0059684.1 MGP_NODShiLtJ_G0026858.1 mouse_genomes_project 3 550499 729759 + MGP_NODShiLtJ_P0059684 Hnf4g protein_coding protein_coding MGP_NODShiLtJ_T0059685.1 MGP_NODShiLtJ_G0026858.1 mouse_genomes_project 3 697358 729967 + MGP_NODShiLtJ_P0059685 Hnf4g protein_coding protein_coding MGP_NODShiLtJ_T0062134.1 MGP_NODShiLtJ_G0027409.1 mouse_genomes_project 3 109753566 109768595 - MGP_NODShiLtJ_P0062134 Adamtsl4 protein_coding protein_coding MGP_NODShiLtJ_T0062135.1 MGP_NODShiLtJ_G0027409.1 mouse_genomes_project 3 109753569 109768536 - MGP_NODShiLtJ_P0062135 Adamtsl4 protein_coding protein_coding MGP_NODShiLtJ_T0062136.1 MGP_NODShiLtJ_G0027409.1 mouse_genomes_project 3 109754115 109754517 - Adamtsl4 protein_coding processed_transcript MGP_NODShiLtJ_T0062137.1 MGP_NODShiLtJ_G0027409.1 mouse_genomes_project 3 109757870 109758943 - Adamtsl4 protein_coding processed_transcript MGP_NODShiLtJ_T0062138.1 MGP_NODShiLtJ_G0027409.1 mouse_genomes_project 3 109765271 109768543 - MGP_NODShiLtJ_P0062138 Adamtsl4 protein_coding protein_coding MGP_NODShiLtJ_T0060749.1 MGP_NODShiLtJ_G0027087.1 mouse_genomes_project 3 73922124 73943057 + MGP_NODShiLtJ_P0060749 Lekr1 protein_coding protein_coding MGP_NODShiLtJ_T0060750.1 MGP_NODShiLtJ_G0027087.1 mouse_genomes_project 3 73922131 73941102 + Lekr1 protein_coding processed_transcript MGP_NODShiLtJ_T0060751.1 MGP_NODShiLtJ_G0027087.1 mouse_genomes_project 3 73922142 74004000 + Lekr1 protein_coding processed_transcript MGP_NODShiLtJ_T0060752.1 MGP_NODShiLtJ_G0027087.1 mouse_genomes_project 3 73922164 73924341 + Lekr1 protein_coding retained_intron MGP_NODShiLtJ_T0060753.1 MGP_NODShiLtJ_G0027087.1 mouse_genomes_project 3 73922178 74035382 + Lekr1 protein_coding processed_transcript MGP_NODShiLtJ_T0060754.1 MGP_NODShiLtJ_G0027087.1 mouse_genomes_project 3 73922213 73992857 + Lekr1 protein_coding processed_transcript MGP_NODShiLtJ_T0060755.1 MGP_NODShiLtJ_G0027087.1 mouse_genomes_project 3 73940930 74096517 + Lekr1 protein_coding processed_transcript MGP_NODShiLtJ_T0017840.1 MGP_NODShiLtJ_G0015387.1 mouse_genomes_project 3 124796802 124799165 - Gm43223 processed_transcript lincRNA MGP_NODShiLtJ_T0017841.1 MGP_NODShiLtJ_G0015387.1 mouse_genomes_project 3 124796811 124798943 - Gm43223 processed_transcript processed_transcript MGP_NODShiLtJ_T0010426.1 MGP_NODShiLtJ_G0008559.1 mouse_genomes_project 3 101382218 101382300 - Mir1905 miRNA miRNA MGP_NODShiLtJ_T0014219.1 MGP_NODShiLtJ_G0012327.1 mouse_genomes_project 3 159678646 159678835 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013821.1 MGP_NODShiLtJ_G0011929.1 mouse_genomes_project 3 17550825 17552164 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100445.1 MGP_NODShiLtJ_G0038839.1 mouse_genomes_project 3 44685823 44685948 - Gm25487 snoRNA snoRNA MGP_NODShiLtJ_T0001183.1 MGP_NODShiLtJ_G0001104.1 mouse_genomes_project 3 59535774 59536230 + TEC TEC MGP_NODShiLtJ_T0007566.1 MGP_NODShiLtJ_G0006184.1 mouse_genomes_project 3 110513095 110524317 - lincRNA lincRNA MGP_NODShiLtJ_T0099179.1 MGP_NODShiLtJ_G0037573.1 mouse_genomes_project 3 74033575 74033682 - Gm25755 snRNA snRNA MGP_NODShiLtJ_T0007589.1 MGP_NODShiLtJ_G0006204.1 mouse_genomes_project 3 120958516 120959763 - Gm43848 lincRNA lincRNA MGP_NODShiLtJ_T0062827.1 MGP_NODShiLtJ_G0027578.1 mouse_genomes_project 3 123521864 123526454 - MGP_NODShiLtJ_P0062827 Gstm2 protein_coding protein_coding MGP_NODShiLtJ_T0062828.1 MGP_NODShiLtJ_G0027578.1 mouse_genomes_project 3 123525121 123526482 - Gstm2 protein_coding retained_intron MGP_NODShiLtJ_T0062829.1 MGP_NODShiLtJ_G0027578.1 mouse_genomes_project 3 123525542 123526482 - Gstm2 protein_coding retained_intron MGP_NODShiLtJ_T0062703.1 MGP_NODShiLtJ_G0027543.1 mouse_genomes_project 3 121241786 121255415 + MGP_NODShiLtJ_P0062703 Ovgp1 protein_coding protein_coding MGP_NODShiLtJ_T0062704.1 MGP_NODShiLtJ_G0027543.1 mouse_genomes_project 3 121242158 121254149 + MGP_NODShiLtJ_P0062704 Ovgp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062705.1 MGP_NODShiLtJ_G0027543.1 mouse_genomes_project 3 121245356 121248240 + Ovgp1 protein_coding retained_intron MGP_NODShiLtJ_T0062706.1 MGP_NODShiLtJ_G0027543.1 mouse_genomes_project 3 121248215 121252853 + Ovgp1 protein_coding processed_transcript MGP_NODShiLtJ_T0004229.1 MGP_NODShiLtJ_G0003709.1 mouse_genomes_project 3 102971078 102972216 + Gm42809 antisense antisense MGP_NODShiLtJ_T0007641.1 MGP_NODShiLtJ_G0006243.1 mouse_genomes_project 3 150943869 150945309 + Gm36520 lincRNA lincRNA MGP_NODShiLtJ_T0062405.1 MGP_NODShiLtJ_G0027478.1 mouse_genomes_project 3 113397522 113417839 - MGP_NODShiLtJ_P0062405 Hao2 protein_coding protein_coding MGP_NODShiLtJ_T0063990.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175522994 175550611 + MGP_NODShiLtJ_P0063990 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0063991.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175523045 175533450 + MGP_NODShiLtJ_P0063991 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0063992.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175523054 175546763 + MGP_NODShiLtJ_P0063992 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0063993.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175523064 175537817 + MGP_NODShiLtJ_P0063993 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0063994.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175523070 175546762 + MGP_NODShiLtJ_P0063994 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0063995.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175523086 175532666 + MGP_NODShiLtJ_P0063995 Fubp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063996.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175523091 175549759 + MGP_NODShiLtJ_P0063996 Fubp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063997.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175523091 175546762 + MGP_NODShiLtJ_P0063997 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0063998.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175523093 175550611 + MGP_NODShiLtJ_P0063998 Fubp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063999.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175530381 175531455 + Fubp1 protein_coding retained_intron MGP_NODShiLtJ_T0064000.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175534313 175537085 + MGP_NODShiLtJ_P0064000 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0064001.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175534835 175535931 + Fubp1 protein_coding retained_intron MGP_NODShiLtJ_T0064002.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175536248 175546763 + MGP_NODShiLtJ_P0064002 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0064003.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175536261 175546780 + MGP_NODShiLtJ_P0064003 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0064004.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175536271 175549825 + MGP_NODShiLtJ_P0064004 Fubp1 protein_coding protein_coding MGP_NODShiLtJ_T0064005.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175537678 175549410 + Fubp1 protein_coding retained_intron MGP_NODShiLtJ_T0064006.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175538821 175541190 + Fubp1 protein_coding retained_intron MGP_NODShiLtJ_T0064007.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175540255 175545301 + Fubp1 protein_coding retained_intron MGP_NODShiLtJ_T0064008.1 MGP_NODShiLtJ_G0027804.1 mouse_genomes_project 3 175540783 175546499 + Fubp1 protein_coding retained_intron MGP_NODShiLtJ_T0013878.1 MGP_NODShiLtJ_G0011986.1 mouse_genomes_project 3 40590499 40591164 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061862.1 MGP_NODShiLtJ_G0027357.1 mouse_genomes_project 3 107274030 107283600 + MGP_NODShiLtJ_P0061862 S100a10 protein_coding protein_coding MGP_NODShiLtJ_T0061863.1 MGP_NODShiLtJ_G0027357.1 mouse_genomes_project 3 107274113 107280473 + S100a10 protein_coding retained_intron MGP_NODShiLtJ_T0061864.1 MGP_NODShiLtJ_G0027357.1 mouse_genomes_project 3 107279694 107283407 + MGP_NODShiLtJ_P0061864 S100a10 protein_coding protein_coding MGP_NODShiLtJ_T0007654.1 MGP_NODShiLtJ_G0006255.1 mouse_genomes_project 3 157236051 157251401 - 1700030L20Rik lincRNA lincRNA MGP_NODShiLtJ_T0063428.1 MGP_NODShiLtJ_G0027692.1 mouse_genomes_project 3 149906846 149920258 + MGP_NODShiLtJ_P0063428 Casp6 protein_coding protein_coding MGP_NODShiLtJ_T0063429.1 MGP_NODShiLtJ_G0027692.1 mouse_genomes_project 3 149906879 149914898 + Casp6 protein_coding processed_transcript MGP_NODShiLtJ_T0063430.1 MGP_NODShiLtJ_G0027692.1 mouse_genomes_project 3 149906922 149910837 + Casp6 protein_coding retained_intron MGP_NODShiLtJ_T0063431.1 MGP_NODShiLtJ_G0027692.1 mouse_genomes_project 3 149916615 149919756 + Casp6 protein_coding retained_intron MGP_NODShiLtJ_T0060656.1 MGP_NODShiLtJ_G0027062.1 mouse_genomes_project 3 67151360 67167089 + MGP_NODShiLtJ_P0060656 protein_coding protein_coding MGP_NODShiLtJ_T0013905.1 MGP_NODShiLtJ_G0012013.1 mouse_genomes_project 3 52267066 52268069 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004305.1 MGP_NODShiLtJ_G0003756.1 mouse_genomes_project 3 141625352 141693428 - 4933405D12Rik antisense antisense MGP_NODShiLtJ_T0004306.1 MGP_NODShiLtJ_G0003756.1 mouse_genomes_project 3 141643841 141693428 - 4933405D12Rik antisense antisense MGP_NODShiLtJ_T0007387.1 MGP_NODShiLtJ_G0006052.1 mouse_genomes_project 3 7220227 7223558 - C230057A21Rik lincRNA lincRNA MGP_NODShiLtJ_T0007388.1 MGP_NODShiLtJ_G0006052.1 mouse_genomes_project 3 7220422 7223718 - C230057A21Rik lincRNA lincRNA MGP_NODShiLtJ_T0099225.1 MGP_NODShiLtJ_G0037619.1 mouse_genomes_project 3 153197947 153198054 + Gm23196 snRNA snRNA MGP_NODShiLtJ_T0062468.1 MGP_NODShiLtJ_G0027496.1 mouse_genomes_project 3 116843315 116847956 + MGP_NODShiLtJ_P0062468 Nhlh2 protein_coding protein_coding MGP_NODShiLtJ_T0062469.1 MGP_NODShiLtJ_G0027496.1 mouse_genomes_project 3 116843385 116848731 + MGP_NODShiLtJ_P0062469 Nhlh2 protein_coding protein_coding MGP_NODShiLtJ_T0062470.1 MGP_NODShiLtJ_G0027496.1 mouse_genomes_project 3 116843394 116847745 + MGP_NODShiLtJ_P0062470 Nhlh2 protein_coding protein_coding MGP_NODShiLtJ_T0063185.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140739911 140881027 + MGP_NODShiLtJ_P0063185 Abca4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063186.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140739981 140881253 + MGP_NODShiLtJ_P0063186 Abca4 protein_coding protein_coding MGP_NODShiLtJ_T0063187.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140743059 140796987 + Abca4 protein_coding processed_transcript MGP_NODShiLtJ_T0063188.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140771733 140785924 + Abca4 protein_coding processed_transcript MGP_NODShiLtJ_T0063189.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140819330 140828664 + Abca4 protein_coding retained_intron MGP_NODShiLtJ_T0063190.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140821044 140826491 + Abca4 protein_coding retained_intron MGP_NODShiLtJ_T0063191.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140832070 140881255 + MGP_NODShiLtJ_P0063191 Abca4 protein_coding protein_coding MGP_NODShiLtJ_T0063192.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140861796 140864979 + Abca4 protein_coding retained_intron MGP_NODShiLtJ_T0063193.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140864477 140871542 + Abca4 protein_coding retained_intron MGP_NODShiLtJ_T0063194.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140871181 140872209 + Abca4 protein_coding processed_transcript MGP_NODShiLtJ_T0063195.1 MGP_NODShiLtJ_G0027651.1 mouse_genomes_project 3 140874214 140881317 + Abca4 protein_coding retained_intron MGP_NODShiLtJ_T0001225.1 MGP_NODShiLtJ_G0001146.1 mouse_genomes_project 3 97586970 97589106 - TEC TEC MGP_NODShiLtJ_T0007534.1 MGP_NODShiLtJ_G0006164.1 mouse_genomes_project 3 97805027 97838571 - Gm42813 lincRNA lincRNA MGP_NODShiLtJ_T0001230.1 MGP_NODShiLtJ_G0001151.1 mouse_genomes_project 3 103462601 103468306 + TEC TEC MGP_NODShiLtJ_T0062715.1 MGP_NODShiLtJ_G0027547.1 mouse_genomes_project 3 121439285 121534836 - MGP_NODShiLtJ_P0062715 Chil3 protein_coding protein_coding MGP_NODShiLtJ_T0062716.1 MGP_NODShiLtJ_G0027547.1 mouse_genomes_project 3 121440328 121442186 - MGP_NODShiLtJ_P0062716 Chil3 protein_coding protein_coding MGP_NODShiLtJ_T0013786.1 MGP_NODShiLtJ_G0011894.1 mouse_genomes_project 3 6640252 6642104 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060917.1 MGP_NODShiLtJ_G0027127.1 mouse_genomes_project 3 91149088 91264314 - MGP_NODShiLtJ_P0060917 Fnip2 protein_coding protein_coding MGP_NODShiLtJ_T0060918.1 MGP_NODShiLtJ_G0027127.1 mouse_genomes_project 3 91150021 91159338 - Fnip2 protein_coding retained_intron MGP_NODShiLtJ_T0060919.1 MGP_NODShiLtJ_G0027127.1 mouse_genomes_project 3 91152428 91264200 - MGP_NODShiLtJ_P0060919 Fnip2 protein_coding protein_coding MGP_NODShiLtJ_T0060920.1 MGP_NODShiLtJ_G0027127.1 mouse_genomes_project 3 91152727 91194063 - Fnip2 protein_coding retained_intron MGP_NODShiLtJ_T0060921.1 MGP_NODShiLtJ_G0027127.1 mouse_genomes_project 3 91197768 91209325 - Fnip2 protein_coding processed_transcript MGP_NODShiLtJ_T0060922.1 MGP_NODShiLtJ_G0027127.1 mouse_genomes_project 3 91199312 91264197 - Fnip2 protein_coding retained_intron MGP_NODShiLtJ_T0100433.1 MGP_NODShiLtJ_G0038827.1 mouse_genomes_project 3 7160454 7160573 - Gm23670 snoRNA snoRNA MGP_NODShiLtJ_T0007435.1 MGP_NODShiLtJ_G0006088.1 mouse_genomes_project 3 37201126 37208358 - Gm42695 lincRNA lincRNA MGP_NODShiLtJ_T0064164.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 181948264 182013408 + MGP_NODShiLtJ_P0064164 Ankrd13c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064165.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 181948439 182010014 + MGP_NODShiLtJ_P0064165 Ankrd13c protein_coding protein_coding MGP_NODShiLtJ_T0064166.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 181948439 182014015 + MGP_NODShiLtJ_P0064166 Ankrd13c protein_coding protein_coding MGP_NODShiLtJ_T0064167.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 181948491 182010934 + Ankrd13c protein_coding retained_intron MGP_NODShiLtJ_T0064168.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 181991021 181998835 + Ankrd13c protein_coding retained_intron MGP_NODShiLtJ_T0064169.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 181995083 182008103 + Ankrd13c protein_coding retained_intron MGP_NODShiLtJ_T0064170.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 181997725 182005224 + Ankrd13c protein_coding processed_transcript MGP_NODShiLtJ_T0064171.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 181998303 182005194 + Ankrd13c protein_coding retained_intron MGP_NODShiLtJ_T0064172.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 182002625 182007201 + Ankrd13c protein_coding retained_intron MGP_NODShiLtJ_T0064173.1 MGP_NODShiLtJ_G0027829.1 mouse_genomes_project 3 182003502 182005240 + Ankrd13c protein_coding retained_intron MGP_NODShiLtJ_T0001369.1 MGP_NODShiLtJ_G0001289.1 mouse_genomes_project 3 182189029 182190389 + TEC TEC MGP_NODShiLtJ_T0007580.1 MGP_NODShiLtJ_G0006197.1 mouse_genomes_project 3 117122872 117316461 + A230001M10Rik lincRNA lincRNA MGP_NODShiLtJ_T0007581.1 MGP_NODShiLtJ_G0006197.1 mouse_genomes_project 3 117122989 117149250 + A230001M10Rik lincRNA lincRNA MGP_NODShiLtJ_T0007582.1 MGP_NODShiLtJ_G0006197.1 mouse_genomes_project 3 117123306 117148455 + A230001M10Rik lincRNA lincRNA MGP_NODShiLtJ_T0001222.1 MGP_NODShiLtJ_G0001143.1 mouse_genomes_project 3 91888716 91891603 + TEC TEC MGP_NODShiLtJ_T0064210.1 MGP_NODShiLtJ_G0027835.1 mouse_genomes_project 3 184193885 184309946 + MGP_NODShiLtJ_P0064210 Wls protein_coding protein_coding MGP_NODShiLtJ_T0064211.1 MGP_NODShiLtJ_G0027835.1 mouse_genomes_project 3 184193950 184312591 + MGP_NODShiLtJ_P0064211 Wls protein_coding protein_coding MGP_NODShiLtJ_T0064212.1 MGP_NODShiLtJ_G0027835.1 mouse_genomes_project 3 184193952 184271809 + Wls protein_coding retained_intron MGP_NODShiLtJ_T0064213.1 MGP_NODShiLtJ_G0027835.1 mouse_genomes_project 3 184193952 184272784 + Wls protein_coding retained_intron MGP_NODShiLtJ_T0064214.1 MGP_NODShiLtJ_G0027835.1 mouse_genomes_project 3 184193952 184308826 + MGP_NODShiLtJ_P0064214 Wls protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064215.1 MGP_NODShiLtJ_G0027835.1 mouse_genomes_project 3 184194123 184233710 + Wls protein_coding retained_intron MGP_NODShiLtJ_T0064216.1 MGP_NODShiLtJ_G0027835.1 mouse_genomes_project 3 184205508 184209312 + Wls protein_coding retained_intron MGP_NODShiLtJ_T0061940.1 MGP_NODShiLtJ_G0027377.1 mouse_genomes_project 3 108712173 108738130 - MGP_NODShiLtJ_P0061940 Cgn protein_coding protein_coding MGP_NODShiLtJ_T0061941.1 MGP_NODShiLtJ_G0027377.1 mouse_genomes_project 3 108712173 108738159 - MGP_NODShiLtJ_P0061941 Cgn protein_coding protein_coding MGP_NODShiLtJ_T0061942.1 MGP_NODShiLtJ_G0027377.1 mouse_genomes_project 3 108726896 108738134 - MGP_NODShiLtJ_P0061942 Cgn protein_coding protein_coding MGP_NODShiLtJ_T0061943.1 MGP_NODShiLtJ_G0027377.1 mouse_genomes_project 3 108726896 108738118 - MGP_NODShiLtJ_P0061943 Cgn protein_coding protein_coding MGP_NODShiLtJ_T0013968.1 MGP_NODShiLtJ_G0012076.1 mouse_genomes_project 3 74267873 74270460 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013884.1 MGP_NODShiLtJ_G0011992.1 mouse_genomes_project 3 41635912 41636447 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061088.1 MGP_NODShiLtJ_G0027169.1 mouse_genomes_project 3 98708534 99107452 + MGP_NODShiLtJ_P0061088 Lrba protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061089.1 MGP_NODShiLtJ_G0027169.1 mouse_genomes_project 3 98708981 99384044 + MGP_NODShiLtJ_P0061089 Lrba protein_coding protein_coding MGP_NODShiLtJ_T0061090.1 MGP_NODShiLtJ_G0027169.1 mouse_genomes_project 3 98708981 99337861 + MGP_NODShiLtJ_P0061090 Lrba protein_coding protein_coding MGP_NODShiLtJ_T0061091.1 MGP_NODShiLtJ_G0027169.1 mouse_genomes_project 3 98708981 99377467 + MGP_NODShiLtJ_P0061091 Lrba protein_coding protein_coding MGP_NODShiLtJ_T0061092.1 MGP_NODShiLtJ_G0027169.1 mouse_genomes_project 3 98859827 98861165 + Lrba protein_coding retained_intron MGP_NODShiLtJ_T0061093.1 MGP_NODShiLtJ_G0027169.1 mouse_genomes_project 3 99106140 99185143 + Lrba protein_coding retained_intron MGP_NODShiLtJ_T0061096.1 MGP_NODShiLtJ_G0027169.1 mouse_genomes_project 3 99112310 99200432 + Lrba protein_coding retained_intron MGP_NODShiLtJ_T0061097.1 MGP_NODShiLtJ_G0027169.1 mouse_genomes_project 3 99113771 99384047 + MGP_NODShiLtJ_P0061097 Lrba protein_coding protein_coding MGP_NODShiLtJ_T0013900.1 MGP_NODShiLtJ_G0012008.1 mouse_genomes_project 3 50395555 50395916 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060579.1 MGP_NODShiLtJ_G0027040.1 mouse_genomes_project 3 64322629 64340389 + MGP_NODShiLtJ_P0060579 Tm4sf4 protein_coding protein_coding MGP_NODShiLtJ_T0004165.1 MGP_NODShiLtJ_G0003662.1 mouse_genomes_project 3 35532291 35601122 + 4930419G24Rik antisense antisense MGP_NODShiLtJ_T0001234.1 MGP_NODShiLtJ_G0001155.1 mouse_genomes_project 3 107099112 107100311 + TEC TEC MGP_NODShiLtJ_T0001306.1 MGP_NODShiLtJ_G0001227.1 mouse_genomes_project 3 147413398 147415377 - TEC TEC MGP_NODShiLtJ_T0062398.1 MGP_NODShiLtJ_G0027474.1 mouse_genomes_project 3 113235485 113320640 - MGP_NODShiLtJ_P0062398 Hsd3b3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062401.1 MGP_NODShiLtJ_G0027474.1 mouse_genomes_project 3 113236102 113326315 - Hsd3b3 protein_coding processed_transcript MGP_NODShiLtJ_T0059905.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29029421 29093219 - MGP_NODShiLtJ_P0059905 Ect2 protein_coding protein_coding MGP_NODShiLtJ_T0059906.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29029421 29093236 - MGP_NODShiLtJ_P0059906 Ect2 protein_coding protein_coding MGP_NODShiLtJ_T0059907.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29029422 29093212 - MGP_NODShiLtJ_P0059907 Ect2 protein_coding protein_coding MGP_NODShiLtJ_T0059908.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29029425 29093208 - MGP_NODShiLtJ_P0059908 Ect2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059909.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29031273 29050840 - MGP_NODShiLtJ_P0059909 Ect2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059910.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29050884 29058246 - Ect2 protein_coding retained_intron MGP_NODShiLtJ_T0059911.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29057431 29093170 - Ect2 protein_coding retained_intron MGP_NODShiLtJ_T0059912.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29067013 29074752 - Ect2 protein_coding retained_intron MGP_NODShiLtJ_T0059913.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29084308 29086559 - Ect2 protein_coding retained_intron MGP_NODShiLtJ_T0059914.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29084378 29093212 - MGP_NODShiLtJ_P0059914 Ect2 protein_coding protein_coding MGP_NODShiLtJ_T0059915.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29085326 29093186 - MGP_NODShiLtJ_P0059915 Ect2 protein_coding protein_coding MGP_NODShiLtJ_T0059916.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29085342 29093168 - MGP_NODShiLtJ_P0059916 Ect2 protein_coding protein_coding MGP_NODShiLtJ_T0059917.1 MGP_NODShiLtJ_G0026922.1 mouse_genomes_project 3 29085386 29093140 - MGP_NODShiLtJ_P0059917 Ect2 protein_coding protein_coding MGP_NODShiLtJ_T0063487.1 MGP_NODShiLtJ_G0027703.1 mouse_genomes_project 3 151604733 151686373 + MGP_NODShiLtJ_P0063487 Papss1 protein_coding protein_coding MGP_NODShiLtJ_T0063488.1 MGP_NODShiLtJ_G0027703.1 mouse_genomes_project 3 151604830 151686372 + MGP_NODShiLtJ_P0063488 Papss1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063489.1 MGP_NODShiLtJ_G0027703.1 mouse_genomes_project 3 151604861 151686372 + MGP_NODShiLtJ_P0063489 Papss1 protein_coding protein_coding MGP_NODShiLtJ_T0063490.1 MGP_NODShiLtJ_G0027703.1 mouse_genomes_project 3 151604864 151686373 + MGP_NODShiLtJ_P0063490 Papss1 protein_coding protein_coding MGP_NODShiLtJ_T0063491.1 MGP_NODShiLtJ_G0027703.1 mouse_genomes_project 3 151604900 151624219 + MGP_NODShiLtJ_P0063491 Papss1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098332.1 MGP_NODShiLtJ_G0036737.1 mouse_genomes_project 3 116201227 116203486 + sense_intronic sense_intronic MGP_NODShiLtJ_T0007720.1 MGP_NODShiLtJ_G0006307.1 mouse_genomes_project 3 179790355 179797015 - Gm42947 lincRNA lincRNA MGP_NODShiLtJ_T0064140.1 MGP_NODShiLtJ_G0027824.1 mouse_genomes_project 3 178638379 178647603 + Lrriq3 protein_coding retained_intron MGP_NODShiLtJ_T0064141.1 MGP_NODShiLtJ_G0027824.1 mouse_genomes_project 3 178638379 178743813 + MGP_NODShiLtJ_P0064141 Lrriq3 protein_coding protein_coding MGP_NODShiLtJ_T0064142.1 MGP_NODShiLtJ_G0027824.1 mouse_genomes_project 3 178638483 178731655 + MGP_NODShiLtJ_P0064142 Lrriq3 protein_coding protein_coding MGP_NODShiLtJ_T0064143.1 MGP_NODShiLtJ_G0027824.1 mouse_genomes_project 3 178638533 178685543 + MGP_NODShiLtJ_P0064143 Lrriq3 protein_coding protein_coding MGP_NODShiLtJ_T0063817.1 MGP_NODShiLtJ_G0027769.1 mouse_genomes_project 3 166878203 166911001 - MGP_NODShiLtJ_P0063817 Clca3b protein_coding protein_coding MGP_NODShiLtJ_T0017812.1 MGP_NODShiLtJ_G0015374.1 mouse_genomes_project 3 94036915 94044578 - Gm9989 processed_transcript lincRNA MGP_NODShiLtJ_T0017813.1 MGP_NODShiLtJ_G0015374.1 mouse_genomes_project 3 94041447 94044643 - Gm9989 processed_transcript retained_intron MGP_NODShiLtJ_T0014039.1 MGP_NODShiLtJ_G0012147.1 mouse_genomes_project 3 102080900 102081153 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064009.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175551336 175581853 - MGP_NODShiLtJ_P0064009 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064010.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175551336 175582404 - MGP_NODShiLtJ_P0064010 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064011.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175552030 175571127 - MGP_NODShiLtJ_P0064011 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064012.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175552083 175562715 - MGP_NODShiLtJ_P0064012 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064013.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175552115 175571127 - MGP_NODShiLtJ_P0064013 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064014.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175552716 175559276 - Nexn protein_coding processed_transcript MGP_NODShiLtJ_T0064015.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175557204 175558587 - Nexn protein_coding retained_intron MGP_NODShiLtJ_T0064016.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175558420 175581854 - MGP_NODShiLtJ_P0064016 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064017.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175558476 175571181 - MGP_NODShiLtJ_P0064017 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064018.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175562471 175562915 - Nexn protein_coding retained_intron MGP_NODShiLtJ_T0064019.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175562482 175581881 - MGP_NODShiLtJ_P0064019 Nexn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064020.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175562513 175579592 - MGP_NODShiLtJ_P0064020 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064021.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175562531 175577621 - MGP_NODShiLtJ_P0064021 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064022.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175562633 175578616 - MGP_NODShiLtJ_P0064022 Nexn protein_coding protein_coding MGP_NODShiLtJ_T0064023.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175568316 175582436 - Nexn protein_coding retained_intron MGP_NODShiLtJ_T0064024.1 MGP_NODShiLtJ_G0027805.1 mouse_genomes_project 3 175568529 175568898 - Nexn protein_coding retained_intron MGP_NODShiLtJ_T0001097.1 MGP_NODShiLtJ_G0001020.1 mouse_genomes_project 3 29516739 29517968 + TEC TEC MGP_NODShiLtJ_T0004184.1 MGP_NODShiLtJ_G0003676.1 mouse_genomes_project 3 58612813 58613814 - Gm20402 antisense antisense MGP_NODShiLtJ_T0063813.1 MGP_NODShiLtJ_G0027767.1 mouse_genomes_project 3 166728170 166738132 - MGP_NODShiLtJ_P0063813 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0062274.1 MGP_NODShiLtJ_G0027443.1 mouse_genomes_project 3 110871212 110888839 + MGP_NODShiLtJ_P0062274 Gm42957 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007535.1 MGP_NODShiLtJ_G0006165.1 mouse_genomes_project 3 97969366 97978440 - Gm42812 lincRNA lincRNA MGP_NODShiLtJ_T0062864.1 MGP_NODShiLtJ_G0027587.1 mouse_genomes_project 3 123776260 123786092 - MGP_NODShiLtJ_P0062864 Atxn7l2 protein_coding protein_coding MGP_NODShiLtJ_T0062865.1 MGP_NODShiLtJ_G0027587.1 mouse_genomes_project 3 123776266 123782613 - Atxn7l2 protein_coding retained_intron MGP_NODShiLtJ_T0062866.1 MGP_NODShiLtJ_G0027587.1 mouse_genomes_project 3 123776397 123784480 - MGP_NODShiLtJ_P0062866 Atxn7l2 protein_coding protein_coding MGP_NODShiLtJ_T0062867.1 MGP_NODShiLtJ_G0027587.1 mouse_genomes_project 3 123781120 123783610 - MGP_NODShiLtJ_P0062867 Atxn7l2 protein_coding protein_coding MGP_NODShiLtJ_T0062868.1 MGP_NODShiLtJ_G0027587.1 mouse_genomes_project 3 123783014 123784507 - Atxn7l2 protein_coding processed_transcript MGP_NODShiLtJ_T0007532.1 MGP_NODShiLtJ_G0006162.1 mouse_genomes_project 3 95831927 95852418 - 1700028M03Rik lincRNA lincRNA MGP_NODShiLtJ_T0064068.1 MGP_NODShiLtJ_G0027812.1 mouse_genomes_project 3 176597388 177159172 - MGP_NODShiLtJ_P0064068 St6galnac3 protein_coding protein_coding MGP_NODShiLtJ_T0064069.1 MGP_NODShiLtJ_G0027812.1 mouse_genomes_project 3 176604487 176630191 - MGP_NODShiLtJ_P0064069 St6galnac3 protein_coding protein_coding MGP_NODShiLtJ_T0064070.1 MGP_NODShiLtJ_G0027812.1 mouse_genomes_project 3 176605738 177159111 - MGP_NODShiLtJ_P0064070 St6galnac3 protein_coding protein_coding MGP_NODShiLtJ_T0064071.1 MGP_NODShiLtJ_G0027812.1 mouse_genomes_project 3 176927174 176928040 - St6galnac3 protein_coding retained_intron MGP_NODShiLtJ_T0064072.1 MGP_NODShiLtJ_G0027812.1 mouse_genomes_project 3 176927429 177154994 - St6galnac3 protein_coding retained_intron MGP_NODShiLtJ_T0061979.1 MGP_NODShiLtJ_G0027381.1 mouse_genomes_project 3 108948232 108980175 + MGP_NODShiLtJ_P0061979 Pi4kb protein_coding protein_coding MGP_NODShiLtJ_T0061980.1 MGP_NODShiLtJ_G0027381.1 mouse_genomes_project 3 108948332 108979494 + MGP_NODShiLtJ_P0061980 Pi4kb protein_coding protein_coding MGP_NODShiLtJ_T0061981.1 MGP_NODShiLtJ_G0027381.1 mouse_genomes_project 3 108948377 108979490 + MGP_NODShiLtJ_P0061981 Pi4kb protein_coding protein_coding MGP_NODShiLtJ_T0061982.1 MGP_NODShiLtJ_G0027381.1 mouse_genomes_project 3 108949617 108980113 + MGP_NODShiLtJ_P0061982 Pi4kb protein_coding protein_coding MGP_NODShiLtJ_T0061983.1 MGP_NODShiLtJ_G0027381.1 mouse_genomes_project 3 108949644 108969291 + MGP_NODShiLtJ_P0061983 Pi4kb protein_coding protein_coding MGP_NODShiLtJ_T0061984.1 MGP_NODShiLtJ_G0027381.1 mouse_genomes_project 3 108972275 108979523 + MGP_NODShiLtJ_P0061984 Pi4kb protein_coding protein_coding MGP_NODShiLtJ_T0061985.1 MGP_NODShiLtJ_G0027381.1 mouse_genomes_project 3 108977657 108979591 + Pi4kb protein_coding processed_transcript MGP_NODShiLtJ_T0013814.1 MGP_NODShiLtJ_G0011922.1 mouse_genomes_project 3 14520576 14520865 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063445.1 MGP_NODShiLtJ_G0027695.1 mouse_genomes_project 3 150166973 150228368 + Col25a1 protein_coding processed_transcript MGP_NODShiLtJ_T0063446.1 MGP_NODShiLtJ_G0027695.1 mouse_genomes_project 3 150226376 150608430 + Col25a1 protein_coding retained_intron MGP_NODShiLtJ_T0063447.1 MGP_NODShiLtJ_G0027695.1 mouse_genomes_project 3 150226376 150654837 + MGP_NODShiLtJ_P0063447 Col25a1 protein_coding protein_coding MGP_NODShiLtJ_T0063448.1 MGP_NODShiLtJ_G0027695.1 mouse_genomes_project 3 150226376 150659582 + MGP_NODShiLtJ_P0063448 Col25a1 protein_coding protein_coding MGP_NODShiLtJ_T0063449.1 MGP_NODShiLtJ_G0027695.1 mouse_genomes_project 3 150226376 150656026 + MGP_NODShiLtJ_P0063449 Col25a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063450.1 MGP_NODShiLtJ_G0027695.1 mouse_genomes_project 3 150226969 150659592 + MGP_NODShiLtJ_P0063450 Col25a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063451.1 MGP_NODShiLtJ_G0027695.1 mouse_genomes_project 3 150542301 150545004 + Col25a1 protein_coding retained_intron MGP_NODShiLtJ_T0013988.1 MGP_NODShiLtJ_G0012096.1 mouse_genomes_project 3 78819760 78820034 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014067.1 MGP_NODShiLtJ_G0012175.1 mouse_genomes_project 3 109500819 109501171 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099223.1 MGP_NODShiLtJ_G0037617.1 mouse_genomes_project 3 152182057 152182164 - Gm22421 snRNA snRNA MGP_NODShiLtJ_T0013952.1 MGP_NODShiLtJ_G0012060.1 mouse_genomes_project 3 68192969 68193127 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004214.1 MGP_NODShiLtJ_G0003698.1 mouse_genomes_project 3 96076067 96093513 - Gm26771 antisense antisense MGP_NODShiLtJ_T0060396.1 MGP_NODShiLtJ_G0027005.1 mouse_genomes_project 3 57493391 57523694 + MGP_NODShiLtJ_P0060396 Noct protein_coding protein_coding MGP_NODShiLtJ_T0060397.1 MGP_NODShiLtJ_G0027005.1 mouse_genomes_project 3 57493414 57523681 + MGP_NODShiLtJ_P0060397 Noct protein_coding protein_coding MGP_NODShiLtJ_T0060398.1 MGP_NODShiLtJ_G0027005.1 mouse_genomes_project 3 57517370 57523681 + MGP_NODShiLtJ_P0060398 Noct protein_coding protein_coding MGP_NODShiLtJ_T0062690.1 MGP_NODShiLtJ_G0027540.1 mouse_genomes_project 3 121189663 121197968 - MGP_NODShiLtJ_P0062690 I830077J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0062691.1 MGP_NODShiLtJ_G0027540.1 mouse_genomes_project 3 121191716 121193316 - MGP_NODShiLtJ_P0062691 I830077J02Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062692.1 MGP_NODShiLtJ_G0027540.1 mouse_genomes_project 3 121193002 121197920 - I830077J02Rik protein_coding retained_intron MGP_NODShiLtJ_T0061169.1 MGP_NODShiLtJ_G0027187.1 mouse_genomes_project 3 100617595 100627121 + MGP_NODShiLtJ_P0061169 Hdgf protein_coding protein_coding MGP_NODShiLtJ_T0061170.1 MGP_NODShiLtJ_G0027187.1 mouse_genomes_project 3 100618023 100625637 + MGP_NODShiLtJ_P0061170 Hdgf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061171.1 MGP_NODShiLtJ_G0027187.1 mouse_genomes_project 3 100618505 100625154 + Hdgf protein_coding processed_transcript MGP_NODShiLtJ_T0061172.1 MGP_NODShiLtJ_G0027187.1 mouse_genomes_project 3 100621020 100625170 + Hdgf protein_coding processed_transcript MGP_NODShiLtJ_T0061173.1 MGP_NODShiLtJ_G0027187.1 mouse_genomes_project 3 100624948 100625765 + Hdgf protein_coding retained_intron MGP_NODShiLtJ_T0062296.1 MGP_NODShiLtJ_G0027447.1 mouse_genomes_project 3 110948550 110951031 - MGP_NODShiLtJ_P0062296 Nudt17 protein_coding protein_coding MGP_NODShiLtJ_T0062297.1 MGP_NODShiLtJ_G0027447.1 mouse_genomes_project 3 110948551 110949727 - Nudt17 protein_coding retained_intron MGP_NODShiLtJ_T0062298.1 MGP_NODShiLtJ_G0027447.1 mouse_genomes_project 3 110948552 110951046 - MGP_NODShiLtJ_P0062298 Nudt17 protein_coding protein_coding MGP_NODShiLtJ_T0062299.1 MGP_NODShiLtJ_G0027447.1 mouse_genomes_project 3 110948651 110951023 - MGP_NODShiLtJ_P0062299 Nudt17 protein_coding protein_coding MGP_NODShiLtJ_T0001237.1 MGP_NODShiLtJ_G0001158.1 mouse_genomes_project 3 109714616 109716359 + TEC TEC MGP_NODShiLtJ_T0063073.1 MGP_NODShiLtJ_G0027630.1 mouse_genomes_project 3 134466200 134499074 - MGP_NODShiLtJ_P0063073 Mfsd14a protein_coding protein_coding MGP_NODShiLtJ_T0063074.1 MGP_NODShiLtJ_G0027630.1 mouse_genomes_project 3 134467660 134471540 - Mfsd14a protein_coding retained_intron MGP_NODShiLtJ_T0063075.1 MGP_NODShiLtJ_G0027630.1 mouse_genomes_project 3 134476366 134480795 - Mfsd14a protein_coding retained_intron MGP_NODShiLtJ_T0063077.1 MGP_NODShiLtJ_G0027630.1 mouse_genomes_project 3 134483180 134498888 - Mfsd14a protein_coding retained_intron MGP_NODShiLtJ_T0063078.1 MGP_NODShiLtJ_G0027630.1 mouse_genomes_project 3 134485940 134499007 - Mfsd14a protein_coding retained_intron MGP_NODShiLtJ_T0061192.1 MGP_NODShiLtJ_G0027190.1 mouse_genomes_project 3 100641673 100651924 + MGP_NODShiLtJ_P0061192 Isg20l2 protein_coding protein_coding MGP_NODShiLtJ_T0061112.1 MGP_NODShiLtJ_G0027175.1 mouse_genomes_project 3 99902470 99916343 - MGP_NODShiLtJ_P0061112 Fcrls protein_coding protein_coding MGP_NODShiLtJ_T0061113.1 MGP_NODShiLtJ_G0027175.1 mouse_genomes_project 3 99911675 99916482 - MGP_NODShiLtJ_P0061113 Fcrls protein_coding protein_coding MGP_NODShiLtJ_T0001244.1 MGP_NODShiLtJ_G0001165.1 mouse_genomes_project 3 111554995 111556184 - TEC TEC MGP_NODShiLtJ_T0061927.1 MGP_NODShiLtJ_G0027373.1 mouse_genomes_project 3 108513157 108565701 - MGP_NODShiLtJ_P0061927 Tuft1 protein_coding protein_coding MGP_NODShiLtJ_T0061928.1 MGP_NODShiLtJ_G0027373.1 mouse_genomes_project 3 108513159 108565702 - MGP_NODShiLtJ_P0061928 Tuft1 protein_coding protein_coding MGP_NODShiLtJ_T0061929.1 MGP_NODShiLtJ_G0027373.1 mouse_genomes_project 3 108513396 108565630 - MGP_NODShiLtJ_P0061929 Tuft1 protein_coding protein_coding MGP_NODShiLtJ_T0061930.1 MGP_NODShiLtJ_G0027373.1 mouse_genomes_project 3 108514568 108515772 - Tuft1 protein_coding retained_intron MGP_NODShiLtJ_T0061931.1 MGP_NODShiLtJ_G0027373.1 mouse_genomes_project 3 108523881 108565630 - MGP_NODShiLtJ_P0061931 Tuft1 protein_coding protein_coding MGP_NODShiLtJ_T0061932.1 MGP_NODShiLtJ_G0027373.1 mouse_genomes_project 3 108536751 108565633 - MGP_NODShiLtJ_P0061932 Tuft1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014256.1 MGP_NODShiLtJ_G0012364.1 mouse_genomes_project 3 181381683 181382453 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061954.1 MGP_NODShiLtJ_G0027379.1 mouse_genomes_project 3 108841147 108844020 - MGP_NODShiLtJ_P0061954 Psmb4 protein_coding protein_coding MGP_NODShiLtJ_T0061955.1 MGP_NODShiLtJ_G0027379.1 mouse_genomes_project 3 108841376 108841898 - Psmb4 protein_coding retained_intron MGP_NODShiLtJ_T0061956.1 MGP_NODShiLtJ_G0027379.1 mouse_genomes_project 3 108841955 108843921 - Psmb4 protein_coding retained_intron MGP_NODShiLtJ_T0061957.1 MGP_NODShiLtJ_G0027379.1 mouse_genomes_project 3 108841974 108843804 - Psmb4 protein_coding retained_intron MGP_NODShiLtJ_T0061958.1 MGP_NODShiLtJ_G0027379.1 mouse_genomes_project 3 108842364 108843013 - Psmb4 protein_coding retained_intron MGP_NODShiLtJ_T0004221.1 MGP_NODShiLtJ_G0003703.1 mouse_genomes_project 3 101546941 101549646 - antisense antisense MGP_NODShiLtJ_T0010433.1 MGP_NODShiLtJ_G0008566.1 mouse_genomes_project 3 107140690 107140799 - Gm22752 miRNA miRNA MGP_NODShiLtJ_T0013795.1 MGP_NODShiLtJ_G0011903.1 mouse_genomes_project 3 8582558 8583372 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101852.1 MGP_NODShiLtJ_G0040020.1 mouse_genomes_project 3 14673187 14695826 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100480.1 MGP_NODShiLtJ_G0038874.1 mouse_genomes_project 3 118399649 118399751 + Gm25009 snoRNA snoRNA MGP_NODShiLtJ_T0061397.1 MGP_NODShiLtJ_G0027227.1 mouse_genomes_project 3 101895239 102041811 + MGP_NODShiLtJ_P0061397 Ash1l protein_coding protein_coding MGP_NODShiLtJ_T0061399.1 MGP_NODShiLtJ_G0027227.1 mouse_genomes_project 3 101913806 102041809 + MGP_NODShiLtJ_P0061399 Ash1l protein_coding protein_coding MGP_NODShiLtJ_T0061400.1 MGP_NODShiLtJ_G0027227.1 mouse_genomes_project 3 101975971 101981057 + Ash1l protein_coding retained_intron MGP_NODShiLtJ_T0061401.1 MGP_NODShiLtJ_G0027227.1 mouse_genomes_project 3 102015055 102018040 + Ash1l protein_coding retained_intron MGP_NODShiLtJ_T0013914.1 MGP_NODShiLtJ_G0012022.1 mouse_genomes_project 3 55788027 55788447 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014032.1 MGP_NODShiLtJ_G0012140.1 mouse_genomes_project 3 99543858 99544154 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001270.1 MGP_NODShiLtJ_G0001191.1 mouse_genomes_project 3 139783046 139785668 + TEC TEC MGP_NODShiLtJ_T0001367.1 MGP_NODShiLtJ_G0001287.1 mouse_genomes_project 3 181980825 181985236 + TEC TEC MGP_NODShiLtJ_T0060520.1 MGP_NODShiLtJ_G0027029.1 mouse_genomes_project 3 61432070 61436747 - MGP_NODShiLtJ_P0060520 Rfxap protein_coding protein_coding MGP_NODShiLtJ_T0060521.1 MGP_NODShiLtJ_G0027029.1 mouse_genomes_project 3 61433175 61434723 - Rfxap protein_coding processed_transcript MGP_NODShiLtJ_T0060522.1 MGP_NODShiLtJ_G0027029.1 mouse_genomes_project 3 61434730 61436376 - Rfxap protein_coding processed_transcript MGP_NODShiLtJ_T0001211.1 MGP_NODShiLtJ_G0001132.1 mouse_genomes_project 3 77705176 77710913 - TEC TEC MGP_NODShiLtJ_T0007443.1 MGP_NODShiLtJ_G0006095.1 mouse_genomes_project 3 39339861 39347740 - Gm11548 lincRNA lincRNA MGP_NODShiLtJ_T0060210.1 MGP_NODShiLtJ_G0026977.1 mouse_genomes_project 3 39468750 39546119 - MGP_NODShiLtJ_P0060210 Trpc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060211.1 MGP_NODShiLtJ_G0026977.1 mouse_genomes_project 3 39468756 39546307 - MGP_NODShiLtJ_P0060211 Trpc3 protein_coding protein_coding MGP_NODShiLtJ_T0060212.1 MGP_NODShiLtJ_G0026977.1 mouse_genomes_project 3 39468837 39469639 - Trpc3 protein_coding processed_transcript MGP_NODShiLtJ_T0060213.1 MGP_NODShiLtJ_G0026977.1 mouse_genomes_project 3 39468837 39469617 - Trpc3 protein_coding processed_transcript MGP_NODShiLtJ_T0060214.1 MGP_NODShiLtJ_G0026977.1 mouse_genomes_project 3 39486020 39488268 - Trpc3 protein_coding retained_intron MGP_NODShiLtJ_T0060215.1 MGP_NODShiLtJ_G0026977.1 mouse_genomes_project 3 39522895 39546307 - Trpc3 protein_coding retained_intron MGP_NODShiLtJ_T0014155.1 MGP_NODShiLtJ_G0012263.1 mouse_genomes_project 3 138486963 138487771 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007459.1 MGP_NODShiLtJ_G0006107.1 mouse_genomes_project 3 44407860 44417476 - Gm42784 lincRNA lincRNA MGP_NODShiLtJ_T0063483.1 MGP_NODShiLtJ_G0027702.1 mouse_genomes_project 3 151437713 151462982 - MGP_NODShiLtJ_P0063483 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063484.1 MGP_NODShiLtJ_G0027702.1 mouse_genomes_project 3 151461585 151464416 - MGP_NODShiLtJ_P0063484 protein_coding protein_coding MGP_NODShiLtJ_T0063485.1 MGP_NODShiLtJ_G0027702.1 mouse_genomes_project 3 151461644 151529326 - MGP_NODShiLtJ_P0063485 protein_coding protein_coding MGP_NODShiLtJ_T0063486.1 MGP_NODShiLtJ_G0027702.1 mouse_genomes_project 3 151461709 151530258 - protein_coding processed_transcript MGP_NODShiLtJ_T0063287.1 MGP_NODShiLtJ_G0027671.1 mouse_genomes_project 3 145295297 145394495 - MGP_NODShiLtJ_P0063287 Ugt8a protein_coding protein_coding MGP_NODShiLtJ_T0063288.1 MGP_NODShiLtJ_G0027671.1 mouse_genomes_project 3 145297093 145366445 - MGP_NODShiLtJ_P0063288 Ugt8a protein_coding protein_coding MGP_NODShiLtJ_T0063289.1 MGP_NODShiLtJ_G0027671.1 mouse_genomes_project 3 145363044 145394427 - Ugt8a protein_coding retained_intron MGP_NODShiLtJ_T0061094.1 MGP_NODShiLtJ_G0027170.1 mouse_genomes_project 3 99111314 99113839 - MGP_NODShiLtJ_P0061094 Mab21l2 protein_coding protein_coding MGP_NODShiLtJ_T0061095.1 MGP_NODShiLtJ_G0027170.1 mouse_genomes_project 3 99111605 99114185 - Mab21l2 protein_coding processed_pseudogene MGP_NODShiLtJ_T0014026.1 MGP_NODShiLtJ_G0012134.1 mouse_genomes_project 3 98368380 98368855 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062679.1 MGP_NODShiLtJ_G0027537.1 mouse_genomes_project 3 120959882 121053156 - MGP_NODShiLtJ_P0062679 Rap1a protein_coding protein_coding MGP_NODShiLtJ_T0063079.1 MGP_NODShiLtJ_G0027632.1 mouse_genomes_project 3 134505853 134552480 - MGP_NODShiLtJ_P0063079 Slc35a3 protein_coding protein_coding MGP_NODShiLtJ_T0063080.1 MGP_NODShiLtJ_G0027632.1 mouse_genomes_project 3 134510253 134552061 - MGP_NODShiLtJ_P0063080 Slc35a3 protein_coding protein_coding MGP_NODShiLtJ_T0063081.1 MGP_NODShiLtJ_G0027632.1 mouse_genomes_project 3 134510769 134513536 - Slc35a3 protein_coding processed_transcript MGP_NODShiLtJ_T0063082.1 MGP_NODShiLtJ_G0027632.1 mouse_genomes_project 3 134518272 134551672 - MGP_NODShiLtJ_P0063082 Slc35a3 protein_coding protein_coding MGP_NODShiLtJ_T0063083.1 MGP_NODShiLtJ_G0027632.1 mouse_genomes_project 3 134518407 134552042 - MGP_NODShiLtJ_P0063083 Slc35a3 protein_coding protein_coding MGP_NODShiLtJ_T0063084.1 MGP_NODShiLtJ_G0027632.1 mouse_genomes_project 3 134529250 134552087 - Slc35a3 protein_coding retained_intron MGP_NODShiLtJ_T0063085.1 MGP_NODShiLtJ_G0027632.1 mouse_genomes_project 3 134533358 134552654 - MGP_NODShiLtJ_P0063085 Slc35a3 protein_coding protein_coding MGP_NODShiLtJ_T0061552.1 MGP_NODShiLtJ_G0027253.1 mouse_genomes_project 3 102415769 102418651 - MGP_NODShiLtJ_P0061552 Cks1b protein_coding protein_coding MGP_NODShiLtJ_T0061553.1 MGP_NODShiLtJ_G0027253.1 mouse_genomes_project 3 102415854 102418285 - MGP_NODShiLtJ_P0061553 Cks1b protein_coding protein_coding MGP_NODShiLtJ_T0061554.1 MGP_NODShiLtJ_G0027253.1 mouse_genomes_project 3 102416141 102418487 - MGP_NODShiLtJ_P0061554 Cks1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004321.1 MGP_NODShiLtJ_G0003769.1 mouse_genomes_project 3 151420255 151434287 + 4930534D22Rik antisense antisense MGP_NODShiLtJ_T0061816.1 MGP_NODShiLtJ_G0027321.1 mouse_genomes_project 3 106114889 106117749 - MGP_NODShiLtJ_P0061816 Ivl protein_coding protein_coding MGP_NODShiLtJ_T0007415.1 MGP_NODShiLtJ_G0006069.1 mouse_genomes_project 3 21364970 21368077 - Gm31466 lincRNA lincRNA MGP_NODShiLtJ_T0061994.1 MGP_NODShiLtJ_G0027383.1 mouse_genomes_project 3 109008518 109021118 - MGP_NODShiLtJ_P0061994 Psmd4 protein_coding protein_coding MGP_NODShiLtJ_T0061995.1 MGP_NODShiLtJ_G0027383.1 mouse_genomes_project 3 109008521 109021056 - MGP_NODShiLtJ_P0061995 Psmd4 protein_coding protein_coding MGP_NODShiLtJ_T0061996.1 MGP_NODShiLtJ_G0027383.1 mouse_genomes_project 3 109008528 109011092 - MGP_NODShiLtJ_P0061996 Psmd4 protein_coding protein_coding MGP_NODShiLtJ_T0061997.1 MGP_NODShiLtJ_G0027383.1 mouse_genomes_project 3 109008529 109021052 - Psmd4 protein_coding retained_intron MGP_NODShiLtJ_T0061998.1 MGP_NODShiLtJ_G0027383.1 mouse_genomes_project 3 109008529 109021047 - MGP_NODShiLtJ_P0061998 Psmd4 protein_coding protein_coding MGP_NODShiLtJ_T0061999.1 MGP_NODShiLtJ_G0027383.1 mouse_genomes_project 3 109008747 109021049 - Psmd4 protein_coding retained_intron MGP_NODShiLtJ_T0062000.1 MGP_NODShiLtJ_G0027383.1 mouse_genomes_project 3 109008752 109009741 - Psmd4 protein_coding retained_intron MGP_NODShiLtJ_T0062001.1 MGP_NODShiLtJ_G0027383.1 mouse_genomes_project 3 109011647 109021054 - Psmd4 protein_coding processed_transcript MGP_NODShiLtJ_T0007613.1 MGP_NODShiLtJ_G0006224.1 mouse_genomes_project 3 136597754 136598982 + Gm9916 lincRNA lincRNA MGP_NODShiLtJ_T0063110.1 MGP_NODShiLtJ_G0027639.1 mouse_genomes_project 3 135818143 135922060 - MGP_NODShiLtJ_P0063110 Snx7 protein_coding protein_coding MGP_NODShiLtJ_T0063111.1 MGP_NODShiLtJ_G0027639.1 mouse_genomes_project 3 135818408 135922133 - MGP_NODShiLtJ_P0063111 Snx7 protein_coding protein_coding MGP_NODShiLtJ_T0063112.1 MGP_NODShiLtJ_G0027639.1 mouse_genomes_project 3 135821235 135891479 - MGP_NODShiLtJ_P0063112 Snx7 protein_coding protein_coding MGP_NODShiLtJ_T0063113.1 MGP_NODShiLtJ_G0027639.1 mouse_genomes_project 3 135821361 135921945 - MGP_NODShiLtJ_P0063113 Snx7 protein_coding protein_coding MGP_NODShiLtJ_T0063114.1 MGP_NODShiLtJ_G0027639.1 mouse_genomes_project 3 135869592 135873801 - Snx7 protein_coding retained_intron MGP_NODShiLtJ_T0061532.1 MGP_NODShiLtJ_G0027248.1 mouse_genomes_project 3 102342917 102360395 - MGP_NODShiLtJ_P0061532 Dcst1 protein_coding protein_coding MGP_NODShiLtJ_T0061533.1 MGP_NODShiLtJ_G0027248.1 mouse_genomes_project 3 102343721 102348240 - Dcst1 protein_coding retained_intron MGP_NODShiLtJ_T0061534.1 MGP_NODShiLtJ_G0027248.1 mouse_genomes_project 3 102345413 102348210 - Dcst1 protein_coding processed_transcript MGP_NODShiLtJ_T0061535.1 MGP_NODShiLtJ_G0027248.1 mouse_genomes_project 3 102346321 102347592 - Dcst1 protein_coding retained_intron MGP_NODShiLtJ_T0061536.1 MGP_NODShiLtJ_G0027248.1 mouse_genomes_project 3 102350202 102359198 - Dcst1 protein_coding retained_intron MGP_NODShiLtJ_T0061537.1 MGP_NODShiLtJ_G0027248.1 mouse_genomes_project 3 102350287 102359199 - Dcst1 protein_coding retained_intron MGP_NODShiLtJ_T0098342.1 MGP_NODShiLtJ_G0036747.1 mouse_genomes_project 3 118817469 118818535 - Gm43387 sense_intronic sense_intronic MGP_NODShiLtJ_T0062445.1 MGP_NODShiLtJ_G0027489.1 mouse_genomes_project 3 115752153 115791312 - MGP_NODShiLtJ_P0062445 Cd101 protein_coding protein_coding MGP_NODShiLtJ_T0062446.1 MGP_NODShiLtJ_G0027489.1 mouse_genomes_project 3 115752156 115783412 - MGP_NODShiLtJ_P0062446 Cd101 protein_coding protein_coding MGP_NODShiLtJ_T0059796.1 MGP_NODShiLtJ_G0026894.1 mouse_genomes_project 3 14811580 14823483 + MGP_NODShiLtJ_P0059796 Car2 protein_coding protein_coding MGP_NODShiLtJ_T0059797.1 MGP_NODShiLtJ_G0026894.1 mouse_genomes_project 3 14811735 14829119 + MGP_NODShiLtJ_P0059797 Car2 protein_coding protein_coding MGP_NODShiLtJ_T0059798.1 MGP_NODShiLtJ_G0026894.1 mouse_genomes_project 3 14811946 14813874 + Car2 protein_coding retained_intron MGP_NODShiLtJ_T0014112.1 MGP_NODShiLtJ_G0012220.1 mouse_genomes_project 3 121351024 121351340 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004272.1 MGP_NODShiLtJ_G0003738.1 mouse_genomes_project 3 120653077 120664573 - Kcnd3os antisense antisense MGP_NODShiLtJ_T0004273.1 MGP_NODShiLtJ_G0003738.1 mouse_genomes_project 3 120660980 120665650 - Kcnd3os antisense antisense MGP_NODShiLtJ_T0063389.1 MGP_NODShiLtJ_G0027684.1 mouse_genomes_project 3 149199560 149268700 - MGP_NODShiLtJ_P0063389 Enpep protein_coding protein_coding MGP_NODShiLtJ_T0063390.1 MGP_NODShiLtJ_G0027684.1 mouse_genomes_project 3 149200662 149268244 - MGP_NODShiLtJ_P0063390 Enpep protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063391.1 MGP_NODShiLtJ_G0027684.1 mouse_genomes_project 3 149207771 149213413 - Enpep protein_coding retained_intron MGP_NODShiLtJ_T0063392.1 MGP_NODShiLtJ_G0027684.1 mouse_genomes_project 3 149207942 149243099 - MGP_NODShiLtJ_P0063392 Enpep protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063393.1 MGP_NODShiLtJ_G0027684.1 mouse_genomes_project 3 149232661 149268700 - Enpep protein_coding retained_intron MGP_NODShiLtJ_T0007512.1 MGP_NODShiLtJ_G0006146.1 mouse_genomes_project 3 84322471 84344812 - lincRNA lincRNA MGP_NODShiLtJ_T0014146.1 MGP_NODShiLtJ_G0012254.1 mouse_genomes_project 3 134347470 134347912 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001278.1 MGP_NODShiLtJ_G0001199.1 mouse_genomes_project 3 141786253 141790698 + TEC TEC MGP_NODShiLtJ_T0017816.1 MGP_NODShiLtJ_G0015376.1 mouse_genomes_project 3 100955312 100958171 + AW047730 processed_transcript processed_transcript MGP_NODShiLtJ_T0017817.1 MGP_NODShiLtJ_G0015376.1 mouse_genomes_project 3 100955324 100958171 + AW047730 processed_transcript processed_transcript MGP_NODShiLtJ_T0101878.1 MGP_NODShiLtJ_G0040046.1 mouse_genomes_project 3 107421715 107422813 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014154.1 MGP_NODShiLtJ_G0012262.1 mouse_genomes_project 3 138243455 138243633 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004179.1 MGP_NODShiLtJ_G0003671.1 mouse_genomes_project 3 42115845 42116925 - Gm43539 antisense antisense MGP_NODShiLtJ_T0013770.1 MGP_NODShiLtJ_G0011878.1 mouse_genomes_project 3 948969 949743 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061613.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070211 103074094 - MGP_NODShiLtJ_P0061613 Hax1 protein_coding protein_coding MGP_NODShiLtJ_T0061614.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070218 103074063 - MGP_NODShiLtJ_P0061614 Hax1 protein_coding protein_coding MGP_NODShiLtJ_T0061615.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070221 103070876 - Hax1 protein_coding retained_intron MGP_NODShiLtJ_T0061616.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070221 103074074 - MGP_NODShiLtJ_P0061616 Hax1 protein_coding protein_coding MGP_NODShiLtJ_T0061617.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070221 103071262 - MGP_NODShiLtJ_P0061617 Hax1 protein_coding protein_coding MGP_NODShiLtJ_T0061618.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070222 103074083 - Hax1 protein_coding retained_intron MGP_NODShiLtJ_T0061619.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070359 103074017 - MGP_NODShiLtJ_P0061619 Hax1 protein_coding protein_coding MGP_NODShiLtJ_T0061620.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070390 103073786 - MGP_NODShiLtJ_P0061620 Hax1 protein_coding protein_coding MGP_NODShiLtJ_T0061621.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070553 103071328 - Hax1 protein_coding retained_intron MGP_NODShiLtJ_T0061622.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103070816 103074077 - MGP_NODShiLtJ_P0061622 Hax1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061623.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103072604 103074177 - Hax1 protein_coding retained_intron MGP_NODShiLtJ_T0061624.1 MGP_NODShiLtJ_G0027265.1 mouse_genomes_project 3 103072854 103073759 - MGP_NODShiLtJ_P0061624 Hax1 protein_coding protein_coding MGP_NODShiLtJ_T0007463.1 MGP_NODShiLtJ_G0006110.1 mouse_genomes_project 3 44726568 44730877 - Gm42434 lincRNA lincRNA MGP_NODShiLtJ_T0007464.1 MGP_NODShiLtJ_G0006110.1 mouse_genomes_project 3 44730752 44731383 - Gm42434 lincRNA lincRNA MGP_NODShiLtJ_T0062243.1 MGP_NODShiLtJ_G0027427.1 mouse_genomes_project 3 110367339 110369048 + MGP_NODShiLtJ_P0062243 Hist2h2ab protein_coding protein_coding MGP_NODShiLtJ_T0004233.1 MGP_NODShiLtJ_G0003713.1 mouse_genomes_project 3 108281203 108291174 - Gm43401 antisense antisense MGP_NODShiLtJ_T0062264.1 MGP_NODShiLtJ_G0027439.1 mouse_genomes_project 3 110798387 110802507 + MGP_NODShiLtJ_P0062264 Ankrd34a protein_coding protein_coding MGP_NODShiLtJ_T0004314.1 MGP_NODShiLtJ_G0003763.1 mouse_genomes_project 3 147560950 147562684 + Gm43653 antisense antisense MGP_NODShiLtJ_T0013802.1 MGP_NODShiLtJ_G0011910.1 mouse_genomes_project 3 11570122 11570489 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007426.1 MGP_NODShiLtJ_G0006080.1 mouse_genomes_project 3 32882556 32883942 - lincRNA lincRNA MGP_NODShiLtJ_T0014089.1 MGP_NODShiLtJ_G0012197.1 mouse_genomes_project 3 115400375 115400666 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017834.1 MGP_NODShiLtJ_G0015385.1 mouse_genomes_project 3 121836688 121840630 - 2010016I18Rik processed_transcript antisense MGP_NODShiLtJ_T0017835.1 MGP_NODShiLtJ_G0015385.1 mouse_genomes_project 3 121836706 121838545 - 2010016I18Rik processed_transcript antisense MGP_NODShiLtJ_T0017836.1 MGP_NODShiLtJ_G0015385.1 mouse_genomes_project 3 121836719 121838144 - 2010016I18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017837.1 MGP_NODShiLtJ_G0015385.1 mouse_genomes_project 3 121836719 121838172 - 2010016I18Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017838.1 MGP_NODShiLtJ_G0015385.1 mouse_genomes_project 3 121838780 121840565 - 2010016I18Rik processed_transcript retained_intron MGP_NODShiLtJ_T0064149.1 MGP_NODShiLtJ_G0027826.1 mouse_genomes_project 3 181506175 181520362 + MGP_NODShiLtJ_P0064149 Zranb2 protein_coding protein_coding MGP_NODShiLtJ_T0064150.1 MGP_NODShiLtJ_G0027826.1 mouse_genomes_project 3 181506374 181520288 + MGP_NODShiLtJ_P0064150 Zranb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064151.1 MGP_NODShiLtJ_G0027826.1 mouse_genomes_project 3 181506374 181520288 + MGP_NODShiLtJ_P0064151 Zranb2 protein_coding protein_coding MGP_NODShiLtJ_T0064152.1 MGP_NODShiLtJ_G0027826.1 mouse_genomes_project 3 181506391 181515160 + MGP_NODShiLtJ_P0064152 Zranb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064153.1 MGP_NODShiLtJ_G0027826.1 mouse_genomes_project 3 181506403 181520328 + MGP_NODShiLtJ_P0064153 Zranb2 protein_coding protein_coding MGP_NODShiLtJ_T0064154.1 MGP_NODShiLtJ_G0027826.1 mouse_genomes_project 3 181506440 181518875 + Zranb2 protein_coding retained_intron MGP_NODShiLtJ_T0064155.1 MGP_NODShiLtJ_G0027826.1 mouse_genomes_project 3 181511008 181513724 + Zranb2 protein_coding retained_intron MGP_NODShiLtJ_T0064156.1 MGP_NODShiLtJ_G0027826.1 mouse_genomes_project 3 181512609 181518755 + MGP_NODShiLtJ_P0064156 Zranb2 protein_coding protein_coding MGP_NODShiLtJ_T0098370.1 MGP_NODShiLtJ_G0036775.1 mouse_genomes_project 3 138226051 138229290 - Gm42664 sense_intronic sense_intronic MGP_NODShiLtJ_T0059962.1 MGP_NODShiLtJ_G0026932.1 mouse_genomes_project 3 30889395 30906157 + protein_coding retained_intron MGP_NODShiLtJ_T0059963.1 MGP_NODShiLtJ_G0026932.1 mouse_genomes_project 3 30889452 30896667 + protein_coding processed_transcript MGP_NODShiLtJ_T0059964.1 MGP_NODShiLtJ_G0026932.1 mouse_genomes_project 3 30889484 30897261 + protein_coding processed_transcript MGP_NODShiLtJ_T0059965.1 MGP_NODShiLtJ_G0026932.1 mouse_genomes_project 3 30896465 30906158 + protein_coding retained_intron MGP_NODShiLtJ_T0014006.1 MGP_NODShiLtJ_G0012114.1 mouse_genomes_project 3 88981137 88982408 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001137.1 MGP_NODShiLtJ_G0001060.1 mouse_genomes_project 3 44068127 44069090 - TEC TEC MGP_NODShiLtJ_T0017872.1 MGP_NODShiLtJ_G0015397.1 mouse_genomes_project 3 171628330 171630277 + Gm43572 processed_transcript processed_transcript MGP_NODShiLtJ_T0017871.1 MGP_NODShiLtJ_G0015396.1 mouse_genomes_project 3 170635297 170639948 + processed_transcript processed_transcript MGP_NODShiLtJ_T0007495.1 MGP_NODShiLtJ_G0006132.1 mouse_genomes_project 3 65147266 65170789 - 1700007F19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007432.1 MGP_NODShiLtJ_G0006085.1 mouse_genomes_project 3 37042235 37043903 + Gm43208 lincRNA lincRNA MGP_NODShiLtJ_T0061813.1 MGP_NODShiLtJ_G0027318.1 mouse_genomes_project 3 106030297 106032241 - MGP_NODShiLtJ_P0061813 Sprr1a protein_coding protein_coding MGP_NODShiLtJ_T0001355.1 MGP_NODShiLtJ_G0001275.1 mouse_genomes_project 3 176890858 176891769 - TEC TEC MGP_NODShiLtJ_T0014131.1 MGP_NODShiLtJ_G0012239.1 mouse_genomes_project 3 128721661 128721962 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014090.1 MGP_NODShiLtJ_G0012198.1 mouse_genomes_project 3 115709022 115709520 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062754.1 MGP_NODShiLtJ_G0027555.1 mouse_genomes_project 3 122238042 122239069 - MGP_NODShiLtJ_P0062754 Olfr266 protein_coding protein_coding MGP_NODShiLtJ_T0060582.1 MGP_NODShiLtJ_G0027042.1 mouse_genomes_project 3 64557596 64566161 - MGP_NODShiLtJ_P0060582 Commd2 protein_coding protein_coding MGP_NODShiLtJ_T0060583.1 MGP_NODShiLtJ_G0027042.1 mouse_genomes_project 3 64559606 64566154 - MGP_NODShiLtJ_P0060583 Commd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060584.1 MGP_NODShiLtJ_G0027042.1 mouse_genomes_project 3 64565547 64566161 - Commd2 protein_coding retained_intron MGP_NODShiLtJ_T0014234.1 MGP_NODShiLtJ_G0012342.1 mouse_genomes_project 3 166724962 166725487 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001282.1 MGP_NODShiLtJ_G0001203.1 mouse_genomes_project 3 142540431 142543475 - TEC TEC MGP_NODShiLtJ_T0063436.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 149998308 150089691 - MGP_NODShiLtJ_P0063436 Sec24b protein_coding protein_coding MGP_NODShiLtJ_T0063437.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 149998993 150000071 - Sec24b protein_coding retained_intron MGP_NODShiLtJ_T0063438.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 149999162 149999833 - Sec24b protein_coding processed_transcript MGP_NODShiLtJ_T0063439.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 150004029 150005773 - Sec24b protein_coding retained_intron MGP_NODShiLtJ_T0063440.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 150005687 150058317 - MGP_NODShiLtJ_P0063440 Sec24b protein_coding protein_coding MGP_NODShiLtJ_T0063441.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 150023553 150058287 - Sec24b protein_coding retained_intron MGP_NODShiLtJ_T0063442.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 150023579 150058593 - MGP_NODShiLtJ_P0063442 Sec24b protein_coding protein_coding MGP_NODShiLtJ_T0063443.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 150025952 150048805 - Sec24b protein_coding retained_intron MGP_NODShiLtJ_T0063444.1 MGP_NODShiLtJ_G0027694.1 mouse_genomes_project 3 150058709 150090337 - Sec24b protein_coding processed_transcript MGP_NODShiLtJ_T0063719.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 159982295 160141057 - MGP_NODShiLtJ_P0063719 Rap1gds1 protein_coding protein_coding MGP_NODShiLtJ_T0063720.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 159982299 160140993 - MGP_NODShiLtJ_P0063720 Rap1gds1 protein_coding protein_coding MGP_NODShiLtJ_T0063721.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 159982303 160140926 - MGP_NODShiLtJ_P0063721 Rap1gds1 protein_coding protein_coding MGP_NODShiLtJ_T0063722.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 159997021 160140996 - MGP_NODShiLtJ_P0063722 Rap1gds1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063723.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 159997024 160141004 - MGP_NODShiLtJ_P0063723 Rap1gds1 protein_coding protein_coding MGP_NODShiLtJ_T0063724.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 160014214 160042837 - Rap1gds1 protein_coding retained_intron MGP_NODShiLtJ_T0063725.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 160077387 160141049 - Rap1gds1 protein_coding retained_intron MGP_NODShiLtJ_T0063726.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 160084692 160140654 - Rap1gds1 protein_coding processed_transcript MGP_NODShiLtJ_T0063727.1 MGP_NODShiLtJ_G0027749.1 mouse_genomes_project 3 160113604 160140996 - Rap1gds1 protein_coding retained_intron MGP_NODShiLtJ_T0001289.1 MGP_NODShiLtJ_G0001210.1 mouse_genomes_project 3 146219095 146222660 + TEC TEC MGP_NODShiLtJ_T0063503.1 MGP_NODShiLtJ_G0027707.1 mouse_genomes_project 3 152918873 153091631 + MGP_NODShiLtJ_P0063503 Tbck protein_coding protein_coding MGP_NODShiLtJ_T0063504.1 MGP_NODShiLtJ_G0027707.1 mouse_genomes_project 3 152918897 152943884 + Tbck protein_coding retained_intron MGP_NODShiLtJ_T0063505.1 MGP_NODShiLtJ_G0027707.1 mouse_genomes_project 3 152918929 153051753 + Tbck protein_coding processed_transcript MGP_NODShiLtJ_T0063506.1 MGP_NODShiLtJ_G0027707.1 mouse_genomes_project 3 153041828 153088527 + Tbck protein_coding processed_transcript MGP_NODShiLtJ_T0004338.1 MGP_NODShiLtJ_G0003779.1 mouse_genomes_project 3 163103430 163111701 - Gm15688 antisense antisense MGP_NODShiLtJ_T0004234.1 MGP_NODShiLtJ_G0003714.1 mouse_genomes_project 3 108929972 108932933 - B230398E01Rik antisense antisense MGP_NODShiLtJ_T0014027.1 MGP_NODShiLtJ_G0012135.1 mouse_genomes_project 3 98369520 98369808 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014203.1 MGP_NODShiLtJ_G0012311.1 mouse_genomes_project 3 155870438 155870863 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007565.1 MGP_NODShiLtJ_G0006183.1 mouse_genomes_project 3 110508606 110525647 + lincRNA lincRNA MGP_NODShiLtJ_T0101879.1 MGP_NODShiLtJ_G0040047.1 mouse_genomes_project 3 107945746 107946370 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007579.1 MGP_NODShiLtJ_G0006196.1 mouse_genomes_project 3 117108022 117108618 + Gm43241 lincRNA lincRNA MGP_NODShiLtJ_T0013833.1 MGP_NODShiLtJ_G0011941.1 mouse_genomes_project 3 20678410 20678970 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060021.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33254268 33329461 - MGP_NODShiLtJ_P0060021 Phc3 protein_coding protein_coding MGP_NODShiLtJ_T0060022.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33254421 33329465 - MGP_NODShiLtJ_P0060022 Phc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060023.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33261681 33329465 - MGP_NODShiLtJ_P0060023 Phc3 protein_coding protein_coding MGP_NODShiLtJ_T0060024.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33261882 33329465 - MGP_NODShiLtJ_P0060024 Phc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060025.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33262208 33329459 - MGP_NODShiLtJ_P0060025 Phc3 protein_coding protein_coding MGP_NODShiLtJ_T0060026.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33262208 33329459 - MGP_NODShiLtJ_P0060026 Phc3 protein_coding protein_coding MGP_NODShiLtJ_T0060027.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33262208 33329459 - MGP_NODShiLtJ_P0060027 Phc3 protein_coding protein_coding MGP_NODShiLtJ_T0060028.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33277586 33289972 - Phc3 protein_coding retained_intron MGP_NODShiLtJ_T0060029.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33285494 33329475 - MGP_NODShiLtJ_P0060029 Phc3 protein_coding protein_coding MGP_NODShiLtJ_T0060030.1 MGP_NODShiLtJ_G0026943.1 mouse_genomes_project 3 33318457 33326000 - Phc3 protein_coding retained_intron MGP_NODShiLtJ_T0061268.1 MGP_NODShiLtJ_G0027207.1 mouse_genomes_project 3 101136667 101152573 + MGP_NODShiLtJ_P0061268 Paqr6 protein_coding protein_coding MGP_NODShiLtJ_T0061269.1 MGP_NODShiLtJ_G0027207.1 mouse_genomes_project 3 101136669 101139321 + Paqr6 protein_coding processed_transcript MGP_NODShiLtJ_T0061270.1 MGP_NODShiLtJ_G0027207.1 mouse_genomes_project 3 101136671 101137881 + Paqr6 protein_coding retained_intron MGP_NODShiLtJ_T0061271.1 MGP_NODShiLtJ_G0027207.1 mouse_genomes_project 3 101137131 101148246 + MGP_NODShiLtJ_P0061271 Paqr6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0004185.1 MGP_NODShiLtJ_G0003677.1 mouse_genomes_project 3 59460189 59463360 - Gm42901 antisense antisense MGP_NODShiLtJ_T0062753.1 MGP_NODShiLtJ_G0027554.1 mouse_genomes_project 3 122166036 122204746 - MGP_NODShiLtJ_P0062753 Cd53 protein_coding protein_coding MGP_NODShiLtJ_T0014172.1 MGP_NODShiLtJ_G0012280.1 mouse_genomes_project 3 143240578 143240825 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062383.1 MGP_NODShiLtJ_G0027467.1 mouse_genomes_project 3 112684598 112710473 + MGP_NODShiLtJ_P0062383 Hmgcs2 protein_coding protein_coding MGP_NODShiLtJ_T0062384.1 MGP_NODShiLtJ_G0027467.1 mouse_genomes_project 3 112684598 112710479 + MGP_NODShiLtJ_P0062384 Hmgcs2 protein_coding protein_coding MGP_NODShiLtJ_T0010438.1 MGP_NODShiLtJ_G0008571.1 mouse_genomes_project 3 112053051 112053105 - Mir7225 miRNA miRNA MGP_NODShiLtJ_T0007706.1 MGP_NODShiLtJ_G0006298.1 mouse_genomes_project 3 173534269 173539925 + Gm43470 lincRNA lincRNA MGP_NODShiLtJ_T0007707.1 MGP_NODShiLtJ_G0006298.1 mouse_genomes_project 3 173534348 173563377 + Gm43470 lincRNA lincRNA MGP_NODShiLtJ_T0060146.1 MGP_NODShiLtJ_G0026965.1 mouse_genomes_project 3 38522334 38524240 + Atp11b protein_coding retained_intron MGP_NODShiLtJ_T0060147.1 MGP_NODShiLtJ_G0026965.1 mouse_genomes_project 3 38522362 38602885 + Atp11b protein_coding processed_transcript MGP_NODShiLtJ_T0060148.1 MGP_NODShiLtJ_G0026965.1 mouse_genomes_project 3 38522362 38632397 + Atp11b protein_coding retained_intron MGP_NODShiLtJ_T0060149.1 MGP_NODShiLtJ_G0026965.1 mouse_genomes_project 3 38522362 38632397 + MGP_NODShiLtJ_P0060149 Atp11b protein_coding protein_coding MGP_NODShiLtJ_T0060150.1 MGP_NODShiLtJ_G0026965.1 mouse_genomes_project 3 38560384 38579951 + MGP_NODShiLtJ_P0060150 Atp11b protein_coding protein_coding MGP_NODShiLtJ_T0060151.1 MGP_NODShiLtJ_G0026965.1 mouse_genomes_project 3 38561875 38632397 + MGP_NODShiLtJ_P0060151 Atp11b protein_coding protein_coding MGP_NODShiLtJ_T0060152.1 MGP_NODShiLtJ_G0026965.1 mouse_genomes_project 3 38580824 38583264 + Atp11b protein_coding processed_transcript MGP_NODShiLtJ_T0060153.1 MGP_NODShiLtJ_G0026965.1 mouse_genomes_project 3 38613371 38632397 + Atp11b protein_coding retained_intron MGP_NODShiLtJ_T0061986.1 MGP_NODShiLtJ_G0027382.1 mouse_genomes_project 3 108979921 108985139 - protein_coding retained_intron MGP_NODShiLtJ_T0061987.1 MGP_NODShiLtJ_G0027382.1 mouse_genomes_project 3 108980162 108988708 - MGP_NODShiLtJ_P0061987 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061988.1 MGP_NODShiLtJ_G0027382.1 mouse_genomes_project 3 108980163 108988556 - protein_coding retained_intron MGP_NODShiLtJ_T0061989.1 MGP_NODShiLtJ_G0027382.1 mouse_genomes_project 3 108980163 108988737 - protein_coding retained_intron MGP_NODShiLtJ_T0061990.1 MGP_NODShiLtJ_G0027382.1 mouse_genomes_project 3 108980168 108988770 - MGP_NODShiLtJ_P0061990 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061991.1 MGP_NODShiLtJ_G0027382.1 mouse_genomes_project 3 108985171 108988781 - MGP_NODShiLtJ_P0061991 protein_coding protein_coding MGP_NODShiLtJ_T0061992.1 MGP_NODShiLtJ_G0027382.1 mouse_genomes_project 3 108985300 108988557 - MGP_NODShiLtJ_P0061992 protein_coding protein_coding MGP_NODShiLtJ_T0061993.1 MGP_NODShiLtJ_G0027382.1 mouse_genomes_project 3 108985505 108988551 - MGP_NODShiLtJ_P0061993 protein_coding protein_coding MGP_NODShiLtJ_T0014163.1 MGP_NODShiLtJ_G0012271.1 mouse_genomes_project 3 140885845 140888603 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014159.1 MGP_NODShiLtJ_G0012267.1 mouse_genomes_project 3 140018011 140018432 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007461.1 MGP_NODShiLtJ_G0006109.1 mouse_genomes_project 3 44586079 44601064 + Gm30852 lincRNA lincRNA MGP_NODShiLtJ_T0007462.1 MGP_NODShiLtJ_G0006109.1 mouse_genomes_project 3 44599558 44631149 + Gm30852 lincRNA lincRNA MGP_NODShiLtJ_T0062403.1 MGP_NODShiLtJ_G0027477.1 mouse_genomes_project 3 113374096 113383267 - MGP_NODShiLtJ_P0062403 protein_coding protein_coding MGP_NODShiLtJ_T0062404.1 MGP_NODShiLtJ_G0027477.1 mouse_genomes_project 3 113374098 113383267 - MGP_NODShiLtJ_P0062404 protein_coding protein_coding MGP_NODShiLtJ_T0062306.1 MGP_NODShiLtJ_G0027449.1 mouse_genomes_project 3 110970637 111043983 + MGP_NODShiLtJ_P0062306 Rnf115 protein_coding protein_coding MGP_NODShiLtJ_T0062307.1 MGP_NODShiLtJ_G0027449.1 mouse_genomes_project 3 110970645 111044469 + MGP_NODShiLtJ_P0062307 Rnf115 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062308.1 MGP_NODShiLtJ_G0027449.1 mouse_genomes_project 3 110970782 111039632 + MGP_NODShiLtJ_P0062308 Rnf115 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062309.1 MGP_NODShiLtJ_G0027449.1 mouse_genomes_project 3 110970812 111033358 + Rnf115 protein_coding processed_transcript MGP_NODShiLtJ_T0061013.1 MGP_NODShiLtJ_G0027152.1 mouse_genomes_project 3 96143463 96148959 - MGP_NODShiLtJ_P0061013 Tlr2 protein_coding protein_coding MGP_NODShiLtJ_T0098353.1 MGP_NODShiLtJ_G0036758.1 mouse_genomes_project 3 119259493 119262771 - sense_intronic sense_intronic MGP_NODShiLtJ_T0013953.1 MGP_NODShiLtJ_G0012061.1 mouse_genomes_project 3 68231762 68232332 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004206.1 MGP_NODShiLtJ_G0003693.1 mouse_genomes_project 3 90884312 90926977 + 4921511C10Rik antisense antisense MGP_NODShiLtJ_T0007465.1 MGP_NODShiLtJ_G0006111.1 mouse_genomes_project 3 44733015 44737468 - Platr4 lincRNA lincRNA MGP_NODShiLtJ_T0007466.1 MGP_NODShiLtJ_G0006111.1 mouse_genomes_project 3 44736670 44742182 - Platr4 lincRNA lincRNA MGP_NODShiLtJ_T0007467.1 MGP_NODShiLtJ_G0006111.1 mouse_genomes_project 3 44737795 44742184 - Platr4 lincRNA lincRNA MGP_NODShiLtJ_T0007594.1 MGP_NODShiLtJ_G0006207.1 mouse_genomes_project 3 122491730 122520767 + lincRNA lincRNA MGP_NODShiLtJ_T0007475.1 MGP_NODShiLtJ_G0006117.1 mouse_genomes_project 3 57661084 57670343 + Gm5103 lincRNA lincRNA MGP_NODShiLtJ_T0007476.1 MGP_NODShiLtJ_G0006117.1 mouse_genomes_project 3 57661136 57670350 + Gm5103 lincRNA lincRNA MGP_NODShiLtJ_T0098021.1 MGP_NODShiLtJ_G0036433.1 mouse_genomes_project 3 27207959 27208067 + Gm22832 rRNA rRNA MGP_NODShiLtJ_T0098028.1 MGP_NODShiLtJ_G0036440.1 mouse_genomes_project 3 147428454 147428551 + Gm23279 rRNA rRNA MGP_NODShiLtJ_T0004292.1 MGP_NODShiLtJ_G0003745.1 mouse_genomes_project 3 124327224 124330956 + Gm27244 antisense antisense MGP_NODShiLtJ_T0063076.1 MGP_NODShiLtJ_G0027631.1 mouse_genomes_project 3 134476968 134518428 - MGP_NODShiLtJ_P0063076 Gm43191 protein_coding protein_coding MGP_NODShiLtJ_T0014188.1 MGP_NODShiLtJ_G0012296.1 mouse_genomes_project 3 151011509 151013146 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004161.1 MGP_NODShiLtJ_G0003659.1 mouse_genomes_project 3 34976520 34977062 - Gm37592 antisense antisense MGP_NODShiLtJ_T0004322.1 MGP_NODShiLtJ_G0003770.1 mouse_genomes_project 3 153889156 153932868 + Gm42567 antisense antisense MGP_NODShiLtJ_T0007557.1 MGP_NODShiLtJ_G0006175.1 mouse_genomes_project 3 106478021 106478408 - Gm38201 lincRNA lincRNA MGP_NODShiLtJ_T0062835.1 MGP_NODShiLtJ_G0027580.1 mouse_genomes_project 3 123601327 123605595 - MGP_NODShiLtJ_P0062835 Gstm4 protein_coding protein_coding MGP_NODShiLtJ_T0007578.1 MGP_NODShiLtJ_G0006195.1 mouse_genomes_project 3 116559980 116561805 + Gm43134 lincRNA lincRNA MGP_NODShiLtJ_T0004192.1 MGP_NODShiLtJ_G0003682.1 mouse_genomes_project 3 62606324 62665086 + Gm43376 antisense antisense MGP_NODShiLtJ_T0004193.1 MGP_NODShiLtJ_G0003682.1 mouse_genomes_project 3 62606395 62608282 + Gm43376 antisense antisense MGP_NODShiLtJ_T0101858.1 MGP_NODShiLtJ_G0040026.1 mouse_genomes_project 3 66791045 66817267 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007661.1 MGP_NODShiLtJ_G0006262.1 mouse_genomes_project 3 158963578 158980963 + Gm19708 lincRNA lincRNA MGP_NODShiLtJ_T0060737.1 MGP_NODShiLtJ_G0027083.1 mouse_genomes_project 3 72470395 72515500 - MGP_NODShiLtJ_P0060737 protein_coding protein_coding MGP_NODShiLtJ_T0060738.1 MGP_NODShiLtJ_G0027083.1 mouse_genomes_project 3 72492901 73009931 - protein_coding retained_intron MGP_NODShiLtJ_T0061842.1 MGP_NODShiLtJ_G0027344.1 mouse_genomes_project 3 106610828 106611268 + MGP_NODShiLtJ_P0061842 protein_coding protein_coding MGP_NODShiLtJ_T0007524.1 MGP_NODShiLtJ_G0006155.1 mouse_genomes_project 3 92973526 92974347 + Gm42476 lincRNA lincRNA MGP_NODShiLtJ_T0014189.1 MGP_NODShiLtJ_G0012297.1 mouse_genomes_project 3 151400763 151401777 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063983.1 MGP_NODShiLtJ_G0027803.1 mouse_genomes_project 3 175486488 175522852 - Dnajb4 protein_coding processed_transcript MGP_NODShiLtJ_T0063984.1 MGP_NODShiLtJ_G0027803.1 mouse_genomes_project 3 175491932 175502570 - MGP_NODShiLtJ_P0063984 Dnajb4 protein_coding protein_coding MGP_NODShiLtJ_T0063985.1 MGP_NODShiLtJ_G0027803.1 mouse_genomes_project 3 175491959 175522656 - MGP_NODShiLtJ_P0063985 Dnajb4 protein_coding protein_coding MGP_NODShiLtJ_T0063986.1 MGP_NODShiLtJ_G0027803.1 mouse_genomes_project 3 175493058 175522592 - MGP_NODShiLtJ_P0063986 Dnajb4 protein_coding protein_coding MGP_NODShiLtJ_T0063987.1 MGP_NODShiLtJ_G0027803.1 mouse_genomes_project 3 175502101 175522630 - Dnajb4 protein_coding processed_transcript MGP_NODShiLtJ_T0063988.1 MGP_NODShiLtJ_G0027803.1 mouse_genomes_project 3 175502287 175522630 - MGP_NODShiLtJ_P0063988 Dnajb4 protein_coding protein_coding MGP_NODShiLtJ_T0063989.1 MGP_NODShiLtJ_G0027803.1 mouse_genomes_project 3 175516985 175522875 - Dnajb4 protein_coding retained_intron MGP_NODShiLtJ_T0013912.1 MGP_NODShiLtJ_G0012020.1 mouse_genomes_project 3 55748618 55748933 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001263.1 MGP_NODShiLtJ_G0001184.1 mouse_genomes_project 3 134356781 134357220 + TEC TEC MGP_NODShiLtJ_T0062246.1 MGP_NODShiLtJ_G0027430.1 mouse_genomes_project 3 110388350 110388895 - MGP_NODShiLtJ_P0062246 Hist2h2aa2 protein_coding protein_coding MGP_NODShiLtJ_T0017863.1 MGP_NODShiLtJ_G0015393.1 mouse_genomes_project 3 147871081 147992284 - D030025E07Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017864.1 MGP_NODShiLtJ_G0015393.1 mouse_genomes_project 3 147878265 147888828 - D030025E07Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017865.1 MGP_NODShiLtJ_G0015393.1 mouse_genomes_project 3 147878642 147992287 - D030025E07Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017866.1 MGP_NODShiLtJ_G0015393.1 mouse_genomes_project 3 147902567 147992234 - D030025E07Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017867.1 MGP_NODShiLtJ_G0015393.1 mouse_genomes_project 3 147955167 147992273 - D030025E07Rik processed_transcript lincRNA MGP_NODShiLtJ_T0013947.1 MGP_NODShiLtJ_G0012055.1 mouse_genomes_project 3 66926076 66926190 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059958.1 MGP_NODShiLtJ_G0026930.1 mouse_genomes_project 3 30770490 30807243 + MGP_NODShiLtJ_P0059958 Slc2a2 protein_coding protein_coding MGP_NODShiLtJ_T0059959.1 MGP_NODShiLtJ_G0026930.1 mouse_genomes_project 3 30770604 30801575 + MGP_NODShiLtJ_P0059959 Slc2a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059960.1 MGP_NODShiLtJ_G0026930.1 mouse_genomes_project 3 30795842 30802424 + Slc2a2 protein_coding retained_intron MGP_NODShiLtJ_T0010458.1 MGP_NODShiLtJ_G0008591.1 mouse_genomes_project 3 157650333 157650450 - Gm44327 miRNA miRNA MGP_NODShiLtJ_T0013870.1 MGP_NODShiLtJ_G0011978.1 mouse_genomes_project 3 39382258 39382956 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060800.1 MGP_NODShiLtJ_G0027097.1 mouse_genomes_project 3 75940838 75981923 - MGP_NODShiLtJ_P0060800 Rarres1 protein_coding protein_coding MGP_NODShiLtJ_T0063819.1 MGP_NODShiLtJ_G0027771.1 mouse_genomes_project 3 167082934 167108563 - MGP_NODShiLtJ_P0063819 Clca4a protein_coding protein_coding MGP_NODShiLtJ_T0007680.1 MGP_NODShiLtJ_G0006278.1 mouse_genomes_project 3 165586035 165587812 + Gm42704 lincRNA lincRNA MGP_NODShiLtJ_T0059772.1 MGP_NODShiLtJ_G0026887.1 mouse_genomes_project 3 14334191 14384038 + MGP_NODShiLtJ_P0059772 Slc7a12 protein_coding protein_coding MGP_NODShiLtJ_T0059773.1 MGP_NODShiLtJ_G0026887.1 mouse_genomes_project 3 14334194 14383205 + MGP_NODShiLtJ_P0059773 Slc7a12 protein_coding protein_coding MGP_NODShiLtJ_T0059774.1 MGP_NODShiLtJ_G0026887.1 mouse_genomes_project 3 14334267 14383205 + MGP_NODShiLtJ_P0059774 Slc7a12 protein_coding protein_coding MGP_NODShiLtJ_T0061817.1 MGP_NODShiLtJ_G0027322.1 mouse_genomes_project 3 106149521 106159514 + MGP_NODShiLtJ_P0061817 Iigp1 protein_coding protein_coding MGP_NODShiLtJ_T0061860.1 MGP_NODShiLtJ_G0027355.1 mouse_genomes_project 3 107176783 107180018 + MGP_NODShiLtJ_P0061860 Tchhl1 protein_coding protein_coding MGP_NODShiLtJ_T0007701.1 MGP_NODShiLtJ_G0006295.1 mouse_genomes_project 3 171948739 172124927 - Gm30382 lincRNA lincRNA MGP_NODShiLtJ_T0007702.1 MGP_NODShiLtJ_G0006295.1 mouse_genomes_project 3 171949197 171991705 - Gm30382 lincRNA lincRNA MGP_NODShiLtJ_T0007704.1 MGP_NODShiLtJ_G0006295.1 mouse_genomes_project 3 171980184 172124952 - Gm30382 lincRNA lincRNA MGP_NODShiLtJ_T0062630.1 MGP_NODShiLtJ_G0027524.1 mouse_genomes_project 3 119777812 119800531 + MGP_NODShiLtJ_P0062630 Slc16a1 protein_coding protein_coding MGP_NODShiLtJ_T0062347.1 MGP_NODShiLtJ_G0027457.1 mouse_genomes_project 3 111714046 111747459 - MGP_NODShiLtJ_P0062347 Olfr1402 protein_coding protein_coding MGP_NODShiLtJ_T0063858.1 MGP_NODShiLtJ_G0027779.1 mouse_genomes_project 3 168175652 168178020 + Bcl10 protein_coding retained_intron MGP_NODShiLtJ_T0063859.1 MGP_NODShiLtJ_G0027779.1 mouse_genomes_project 3 168177110 168188060 + MGP_NODShiLtJ_P0063859 Bcl10 protein_coding protein_coding MGP_NODShiLtJ_T0063860.1 MGP_NODShiLtJ_G0027779.1 mouse_genomes_project 3 168177205 168180780 + Bcl10 protein_coding processed_transcript MGP_NODShiLtJ_T0061899.1 MGP_NODShiLtJ_G0027369.1 mouse_genomes_project 3 108333645 108337169 + Mrpl9 protein_coding retained_intron MGP_NODShiLtJ_T0061900.1 MGP_NODShiLtJ_G0027369.1 mouse_genomes_project 3 108333652 108339036 + MGP_NODShiLtJ_P0061900 Mrpl9 protein_coding protein_coding MGP_NODShiLtJ_T0061901.1 MGP_NODShiLtJ_G0027369.1 mouse_genomes_project 3 108333664 108342111 + MGP_NODShiLtJ_P0061901 Mrpl9 protein_coding protein_coding MGP_NODShiLtJ_T0060998.1 MGP_NODShiLtJ_G0027145.1 mouse_genomes_project 3 95121848 95133910 - MGP_NODShiLtJ_P0060998 Lrat protein_coding protein_coding MGP_NODShiLtJ_T0014228.1 MGP_NODShiLtJ_G0012336.1 mouse_genomes_project 3 163897185 163897525 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061592.1 MGP_NODShiLtJ_G0027262.1 mouse_genomes_project 3 102868614 102898535 + MGP_NODShiLtJ_P0061592 She protein_coding protein_coding MGP_NODShiLtJ_T0061593.1 MGP_NODShiLtJ_G0027262.1 mouse_genomes_project 3 102875536 102877186 + She protein_coding retained_intron MGP_NODShiLtJ_T0001330.1 MGP_NODShiLtJ_G0001250.1 mouse_genomes_project 3 156106493 156114262 - TEC TEC MGP_NODShiLtJ_T0061231.1 MGP_NODShiLtJ_G0027201.1 mouse_genomes_project 3 100998014 101048077 - MGP_NODShiLtJ_P0061231 Gm38392 protein_coding protein_coding MGP_NODShiLtJ_T0061232.1 MGP_NODShiLtJ_G0027201.1 mouse_genomes_project 3 100999829 101048077 - MGP_NODShiLtJ_P0061232 Gm38392 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013865.1 MGP_NODShiLtJ_G0011973.1 mouse_genomes_project 3 38642758 38644462 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100487.1 MGP_NODShiLtJ_G0038881.1 mouse_genomes_project 3 133814838 133814970 - Gm26344 snoRNA snoRNA MGP_NODShiLtJ_T0062198.1 MGP_NODShiLtJ_G0027417.1 mouse_genomes_project 3 110016378 110020958 + MGP_NODShiLtJ_P0062198 Aph1a protein_coding protein_coding MGP_NODShiLtJ_T0014248.1 MGP_NODShiLtJ_G0012356.1 mouse_genomes_project 3 175460623 175461293 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014235.1 MGP_NODShiLtJ_G0012343.1 mouse_genomes_project 3 166724962 166725529 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007520.1 MGP_NODShiLtJ_G0006151.1 mouse_genomes_project 3 91264709 91269337 + 4930589L23Rik lincRNA lincRNA MGP_NODShiLtJ_T0061689.1 MGP_NODShiLtJ_G0027273.1 mouse_genomes_project 3 103365225 103371342 - MGP_NODShiLtJ_P0061689 Creb3l4 protein_coding protein_coding MGP_NODShiLtJ_T0061690.1 MGP_NODShiLtJ_G0027273.1 mouse_genomes_project 3 103365295 103370973 - MGP_NODShiLtJ_P0061690 Creb3l4 protein_coding protein_coding MGP_NODShiLtJ_T0014004.1 MGP_NODShiLtJ_G0012112.1 mouse_genomes_project 3 87907227 87907566 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001138.1 MGP_NODShiLtJ_G0001061.1 mouse_genomes_project 3 44233451 44237107 + TEC TEC MGP_NODShiLtJ_T0062272.1 MGP_NODShiLtJ_G0027442.1 mouse_genomes_project 3 110871114 110881104 + Pex11b protein_coding processed_transcript MGP_NODShiLtJ_T0062273.1 MGP_NODShiLtJ_G0027442.1 mouse_genomes_project 3 110871168 110881104 + MGP_NODShiLtJ_P0062273 Pex11b protein_coding protein_coding MGP_NODShiLtJ_T0062275.1 MGP_NODShiLtJ_G0027442.1 mouse_genomes_project 3 110871238 110879771 + MGP_NODShiLtJ_P0062275 Pex11b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062276.1 MGP_NODShiLtJ_G0027442.1 mouse_genomes_project 3 110871391 110872692 + Pex11b protein_coding retained_intron MGP_NODShiLtJ_T0062277.1 MGP_NODShiLtJ_G0027442.1 mouse_genomes_project 3 110871410 110880464 + MGP_NODShiLtJ_P0062277 Pex11b protein_coding protein_coding MGP_NODShiLtJ_T0062278.1 MGP_NODShiLtJ_G0027442.1 mouse_genomes_project 3 110871571 110880464 + MGP_NODShiLtJ_P0062278 Pex11b protein_coding protein_coding MGP_NODShiLtJ_T0062279.1 MGP_NODShiLtJ_G0027442.1 mouse_genomes_project 3 110872791 110879538 + Pex11b protein_coding retained_intron MGP_NODShiLtJ_T0014123.1 MGP_NODShiLtJ_G0012231.1 mouse_genomes_project 3 124867856 124868721 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004349.1 MGP_NODShiLtJ_G0003788.1 mouse_genomes_project 3 176036735 176052711 + AI115009 antisense antisense MGP_NODShiLtJ_T0013784.1 MGP_NODShiLtJ_G0011892.1 mouse_genomes_project 3 5669589 5670622 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004293.1 MGP_NODShiLtJ_G0003746.1 mouse_genomes_project 3 124668922 124670993 + Gm43221 antisense antisense MGP_NODShiLtJ_T0014205.1 MGP_NODShiLtJ_G0012313.1 mouse_genomes_project 3 156215454 156216013 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001357.1 MGP_NODShiLtJ_G0001277.1 mouse_genomes_project 3 177744463 177746439 - TEC TEC MGP_NODShiLtJ_T0060443.1 MGP_NODShiLtJ_G0027013.1 mouse_genomes_project 3 57994694 58120584 - MGP_NODShiLtJ_P0060443 Maml3 protein_coding protein_coding MGP_NODShiLtJ_T0060444.1 MGP_NODShiLtJ_G0027013.1 mouse_genomes_project 3 57994694 58440231 - MGP_NODShiLtJ_P0060444 Maml3 protein_coding protein_coding MGP_NODShiLtJ_T0060445.1 MGP_NODShiLtJ_G0027013.1 mouse_genomes_project 3 58118426 58120622 - Maml3 protein_coding retained_intron MGP_NODShiLtJ_T0001371.1 MGP_NODShiLtJ_G0001291.1 mouse_genomes_project 3 182322470 182327867 + TEC TEC MGP_NODShiLtJ_T0001133.1 MGP_NODShiLtJ_G0001056.1 mouse_genomes_project 3 40856007 40857274 + TEC TEC MGP_NODShiLtJ_T0064073.1 MGP_NODShiLtJ_G0027813.1 mouse_genomes_project 3 177294500 177306298 + MGP_NODShiLtJ_P0064073 Asb17 protein_coding protein_coding MGP_NODShiLtJ_T0064074.1 MGP_NODShiLtJ_G0027813.1 mouse_genomes_project 3 177294557 177304827 + MGP_NODShiLtJ_P0064074 Asb17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100443.1 MGP_NODShiLtJ_G0038837.1 mouse_genomes_project 3 41023661 41023792 - Gm22899 snoRNA snoRNA MGP_NODShiLtJ_T0061801.1 MGP_NODShiLtJ_G0027307.1 mouse_genomes_project 3 105827788 105829227 + MGP_NODShiLtJ_P0061801 Sprr2b protein_coding protein_coding MGP_NODShiLtJ_T0099199.1 MGP_NODShiLtJ_G0037593.1 mouse_genomes_project 3 103727438 103727544 + Gm24593 snRNA snRNA MGP_NODShiLtJ_T0062617.1 MGP_NODShiLtJ_G0027522.1 mouse_genomes_project 3 119069187 119325194 - MGP_NODShiLtJ_P0062617 protein_coding protein_coding MGP_NODShiLtJ_T0062618.1 MGP_NODShiLtJ_G0027522.1 mouse_genomes_project 3 119069556 119324923 - MGP_NODShiLtJ_P0062618 protein_coding protein_coding MGP_NODShiLtJ_T0062619.1 MGP_NODShiLtJ_G0027522.1 mouse_genomes_project 3 119072400 119325058 - MGP_NODShiLtJ_P0062619 protein_coding protein_coding MGP_NODShiLtJ_T0062620.1 MGP_NODShiLtJ_G0027522.1 mouse_genomes_project 3 119132168 119133973 - protein_coding retained_intron MGP_NODShiLtJ_T0007698.1 MGP_NODShiLtJ_G0006293.1 mouse_genomes_project 3 170030536 170049309 - Gm36888 lincRNA lincRNA MGP_NODShiLtJ_T0061386.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101867078 101868986 - Dap3 protein_coding retained_intron MGP_NODShiLtJ_T0061387.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101867078 101893371 - MGP_NODShiLtJ_P0061387 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061388.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101867205 101874429 - MGP_NODShiLtJ_P0061388 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061389.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101867241 101874462 - MGP_NODShiLtJ_P0061389 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061390.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101867271 101893290 - MGP_NODShiLtJ_P0061390 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061391.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101871917 101893718 - MGP_NODShiLtJ_P0061391 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061392.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101871951 101895726 - MGP_NODShiLtJ_P0061392 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061393.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101872886 101893691 - MGP_NODShiLtJ_P0061393 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061394.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101872934 101893326 - MGP_NODShiLtJ_P0061394 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061395.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101877022 101881941 - MGP_NODShiLtJ_P0061395 Dap3 protein_coding protein_coding MGP_NODShiLtJ_T0061396.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101892472 101895655 - Dap3 protein_coding processed_transcript MGP_NODShiLtJ_T0061398.1 MGP_NODShiLtJ_G0027226.1 mouse_genomes_project 3 101895261 101895727 - Dap3 protein_coding processed_transcript MGP_NODShiLtJ_T0007382.1 MGP_NODShiLtJ_G0006048.1 mouse_genomes_project 3 2271875 2273139 + lincRNA lincRNA MGP_NODShiLtJ_T0017860.1 MGP_NODShiLtJ_G0015392.1 mouse_genomes_project 3 142351583 142352436 - Snhg8 processed_transcript lincRNA MGP_NODShiLtJ_T0017861.1 MGP_NODShiLtJ_G0015392.1 mouse_genomes_project 3 142351586 142352362 - Snhg8 processed_transcript retained_intron MGP_NODShiLtJ_T0017862.1 MGP_NODShiLtJ_G0015392.1 mouse_genomes_project 3 142351588 142352365 - Snhg8 processed_transcript lincRNA MGP_NODShiLtJ_T0001368.1 MGP_NODShiLtJ_G0001288.1 mouse_genomes_project 3 182040478 182042949 - TEC TEC MGP_NODShiLtJ_T0001102.1 MGP_NODShiLtJ_G0001025.1 mouse_genomes_project 3 32533721 32535838 - TEC TEC MGP_NODShiLtJ_T0061208.1 MGP_NODShiLtJ_G0027195.1 mouse_genomes_project 3 100778352 100793756 + MGP_NODShiLtJ_P0061208 Gpatch4 protein_coding protein_coding MGP_NODShiLtJ_T0061209.1 MGP_NODShiLtJ_G0027195.1 mouse_genomes_project 3 100778352 100793753 + MGP_NODShiLtJ_P0061209 Gpatch4 protein_coding protein_coding MGP_NODShiLtJ_T0061210.1 MGP_NODShiLtJ_G0027195.1 mouse_genomes_project 3 100778353 100792423 + Gpatch4 protein_coding retained_intron MGP_NODShiLtJ_T0061211.1 MGP_NODShiLtJ_G0027195.1 mouse_genomes_project 3 100778368 100792963 + MGP_NODShiLtJ_P0061211 Gpatch4 protein_coding protein_coding MGP_NODShiLtJ_T0061212.1 MGP_NODShiLtJ_G0027195.1 mouse_genomes_project 3 100778372 100793739 + MGP_NODShiLtJ_P0061212 Gpatch4 protein_coding protein_coding MGP_NODShiLtJ_T0061738.1 MGP_NODShiLtJ_G0027282.1 mouse_genomes_project 3 103661166 103663689 - Snapin protein_coding retained_intron MGP_NODShiLtJ_T0061739.1 MGP_NODShiLtJ_G0027282.1 mouse_genomes_project 3 103661174 103664294 - MGP_NODShiLtJ_P0061739 Snapin protein_coding protein_coding MGP_NODShiLtJ_T0061740.1 MGP_NODShiLtJ_G0027282.1 mouse_genomes_project 3 103661510 103664254 - MGP_NODShiLtJ_P0061740 Snapin protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061741.1 MGP_NODShiLtJ_G0027282.1 mouse_genomes_project 3 103661513 103664285 - MGP_NODShiLtJ_P0061741 Snapin protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061742.1 MGP_NODShiLtJ_G0027282.1 mouse_genomes_project 3 103662260 103664053 - Snapin protein_coding retained_intron MGP_NODShiLtJ_T0063971.1 MGP_NODShiLtJ_G0027801.1 mouse_genomes_project 3 175053668 175110015 - MGP_NODShiLtJ_P0063971 Ptgfr protein_coding protein_coding MGP_NODShiLtJ_T0063972.1 MGP_NODShiLtJ_G0027801.1 mouse_genomes_project 3 175058486 175108408 - MGP_NODShiLtJ_P0063972 Ptgfr protein_coding protein_coding MGP_NODShiLtJ_T0063973.1 MGP_NODShiLtJ_G0027801.1 mouse_genomes_project 3 175058862 175106540 - Ptgfr protein_coding processed_transcript MGP_NODShiLtJ_T0098023.1 MGP_NODShiLtJ_G0036435.1 mouse_genomes_project 3 42813074 42813193 - n-R5s195 rRNA rRNA MGP_NODShiLtJ_T0062651.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120031263 120033718 + St7l protein_coding retained_intron MGP_NODShiLtJ_T0062652.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120031761 120102879 + MGP_NODShiLtJ_P0062652 St7l protein_coding protein_coding MGP_NODShiLtJ_T0062653.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120031761 120106077 + MGP_NODShiLtJ_P0062653 St7l protein_coding protein_coding MGP_NODShiLtJ_T0062654.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120032325 120103783 + MGP_NODShiLtJ_P0062654 St7l protein_coding protein_coding MGP_NODShiLtJ_T0062655.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120032329 120103907 + MGP_NODShiLtJ_P0062655 St7l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062656.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120032338 120059492 + MGP_NODShiLtJ_P0062656 St7l protein_coding protein_coding MGP_NODShiLtJ_T0062657.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120032371 120059424 + St7l protein_coding processed_transcript MGP_NODShiLtJ_T0062658.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120039300 120095520 + MGP_NODShiLtJ_P0062658 St7l protein_coding protein_coding MGP_NODShiLtJ_T0062659.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120039323 120051774 + St7l protein_coding processed_transcript MGP_NODShiLtJ_T0062660.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120051605 120095508 + MGP_NODShiLtJ_P0062660 St7l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062661.1 MGP_NODShiLtJ_G0027530.1 mouse_genomes_project 3 120059009 120067538 + St7l protein_coding retained_intron MGP_NODShiLtJ_T0014110.1 MGP_NODShiLtJ_G0012218.1 mouse_genomes_project 3 121298630 121299059 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099212.1 MGP_NODShiLtJ_G0037606.1 mouse_genomes_project 3 119732620 119732702 - Gm26091 snRNA snRNA MGP_NODShiLtJ_T0010435.1 MGP_NODShiLtJ_G0008568.1 mouse_genomes_project 3 109132273 109132400 - Mir8099-1 miRNA miRNA MGP_NODShiLtJ_T0007553.1 MGP_NODShiLtJ_G0006172.1 mouse_genomes_project 3 103074156 103076787 + Gm19710 lincRNA lincRNA MGP_NODShiLtJ_T0007554.1 MGP_NODShiLtJ_G0006172.1 mouse_genomes_project 3 103076576 103098087 + Gm19710 lincRNA lincRNA MGP_NODShiLtJ_T0100469.1 MGP_NODShiLtJ_G0038863.1 mouse_genomes_project 3 100253495 100253615 - Gm25167 snoRNA snoRNA MGP_NODShiLtJ_T0063166.1 MGP_NODShiLtJ_G0027648.1 mouse_genomes_project 3 140384555 140396416 + MGP_NODShiLtJ_P0063166 F3 protein_coding protein_coding MGP_NODShiLtJ_T0063167.1 MGP_NODShiLtJ_G0027648.1 mouse_genomes_project 3 140384588 140390864 + F3 protein_coding processed_transcript MGP_NODShiLtJ_T0063168.1 MGP_NODShiLtJ_G0027648.1 mouse_genomes_project 3 140390651 140393534 + F3 protein_coding retained_intron MGP_NODShiLtJ_T0063169.1 MGP_NODShiLtJ_G0027648.1 mouse_genomes_project 3 140390875 140396416 + MGP_NODShiLtJ_P0063169 F3 protein_coding protein_coding MGP_NODShiLtJ_T0060806.1 MGP_NODShiLtJ_G0027101.1 mouse_genomes_project 3 76589618 77189506 + MGP_NODShiLtJ_P0060806 Schip1 protein_coding protein_coding MGP_NODShiLtJ_T0060807.1 MGP_NODShiLtJ_G0027101.1 mouse_genomes_project 3 76589618 77189506 + MGP_NODShiLtJ_P0060807 Schip1 protein_coding protein_coding MGP_NODShiLtJ_T0060808.1 MGP_NODShiLtJ_G0027101.1 mouse_genomes_project 3 77023136 77189523 + MGP_NODShiLtJ_P0060808 Schip1 protein_coding protein_coding MGP_NODShiLtJ_T0060809.1 MGP_NODShiLtJ_G0027101.1 mouse_genomes_project 3 77053018 77180631 + MGP_NODShiLtJ_P0060809 Schip1 protein_coding protein_coding MGP_NODShiLtJ_T0060810.1 MGP_NODShiLtJ_G0027101.1 mouse_genomes_project 3 77053735 77189505 + MGP_NODShiLtJ_P0060810 Schip1 protein_coding protein_coding MGP_NODShiLtJ_T0060811.1 MGP_NODShiLtJ_G0027101.1 mouse_genomes_project 3 77131778 77189506 + MGP_NODShiLtJ_P0060811 Schip1 protein_coding protein_coding MGP_NODShiLtJ_T0060812.1 MGP_NODShiLtJ_G0027101.1 mouse_genomes_project 3 77145013 77189506 + MGP_NODShiLtJ_P0060812 Schip1 protein_coding protein_coding MGP_NODShiLtJ_T0060813.1 MGP_NODShiLtJ_G0027101.1 mouse_genomes_project 3 77157020 77159007 + Schip1 protein_coding retained_intron MGP_NODShiLtJ_T0007645.1 MGP_NODShiLtJ_G0006247.1 mouse_genomes_project 3 153092144 153129965 - Gm29811 lincRNA lincRNA MGP_NODShiLtJ_T0099217.1 MGP_NODShiLtJ_G0037611.1 mouse_genomes_project 3 134247173 134247349 - Gm22361 snRNA snRNA MGP_NODShiLtJ_T0063014.1 MGP_NODShiLtJ_G0027618.1 mouse_genomes_project 3 133437653 133442318 - MGP_NODShiLtJ_P0063014 S1pr1 protein_coding protein_coding MGP_NODShiLtJ_T0014238.1 MGP_NODShiLtJ_G0012346.1 mouse_genomes_project 3 167980420 167980860 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013780.1 MGP_NODShiLtJ_G0011888.1 mouse_genomes_project 3 4658682 4658941 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004204.1 MGP_NODShiLtJ_G0003691.1 mouse_genomes_project 3 74094475 74139069 - Gm37359 antisense antisense MGP_NODShiLtJ_T0007699.1 MGP_NODShiLtJ_G0006294.1 mouse_genomes_project 3 171871195 171875275 - Gm10287 lincRNA lincRNA MGP_NODShiLtJ_T0007700.1 MGP_NODShiLtJ_G0006294.1 mouse_genomes_project 3 171871201 171875275 - Gm10287 lincRNA lincRNA MGP_NODShiLtJ_T0063053.1 MGP_NODShiLtJ_G0027627.1 mouse_genomes_project 3 134392773 134404337 + Lrrc39 protein_coding retained_intron MGP_NODShiLtJ_T0063054.1 MGP_NODShiLtJ_G0027627.1 mouse_genomes_project 3 134392778 134414329 + MGP_NODShiLtJ_P0063054 Lrrc39 protein_coding protein_coding MGP_NODShiLtJ_T0014231.1 MGP_NODShiLtJ_G0012339.1 mouse_genomes_project 3 164496377 164497438 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061285.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101274756 101293615 - MGP_NODShiLtJ_P0061285 Sema4a protein_coding protein_coding MGP_NODShiLtJ_T0061286.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101274759 101279937 - Sema4a protein_coding retained_intron MGP_NODShiLtJ_T0061287.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101274759 101287427 - Sema4a protein_coding retained_intron MGP_NODShiLtJ_T0061288.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101274759 101288837 - Sema4a protein_coding retained_intron MGP_NODShiLtJ_T0061289.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101288482 101290249 - MGP_NODShiLtJ_P0061289 Sema4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061290.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101288620 101290584 - Sema4a protein_coding retained_intron MGP_NODShiLtJ_T0061291.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101288833 101294112 - MGP_NODShiLtJ_P0061291 Sema4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061292.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101288895 101297899 - MGP_NODShiLtJ_P0061292 Sema4a protein_coding protein_coding MGP_NODShiLtJ_T0061293.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101289366 101297828 - MGP_NODShiLtJ_P0061293 Sema4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061294.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101289383 101297674 - MGP_NODShiLtJ_P0061294 Sema4a protein_coding protein_coding MGP_NODShiLtJ_T0061295.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101290841 101294103 - MGP_NODShiLtJ_P0061295 Sema4a protein_coding protein_coding MGP_NODShiLtJ_T0061296.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101291628 101293640 - Sema4a protein_coding retained_intron MGP_NODShiLtJ_T0061297.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101291886 101295213 - MGP_NODShiLtJ_P0061297 Sema4a protein_coding protein_coding MGP_NODShiLtJ_T0061298.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101293562 101295234 - MGP_NODShiLtJ_P0061298 Sema4a protein_coding protein_coding MGP_NODShiLtJ_T0061299.1 MGP_NODShiLtJ_G0027212.1 mouse_genomes_project 3 101294522 101295234 - Sema4a protein_coding processed_transcript MGP_NODShiLtJ_T0001100.1 MGP_NODShiLtJ_G0001023.1 mouse_genomes_project 3 31398878 31400243 + TEC TEC MGP_NODShiLtJ_T0004346.1 MGP_NODShiLtJ_G0003786.1 mouse_genomes_project 3 171611403 171626866 + Gm43573 antisense antisense MGP_NODShiLtJ_T0063432.1 MGP_NODShiLtJ_G0027693.1 mouse_genomes_project 3 149921093 149980416 - MGP_NODShiLtJ_P0063432 Ccdc109b protein_coding protein_coding MGP_NODShiLtJ_T0063433.1 MGP_NODShiLtJ_G0027693.1 mouse_genomes_project 3 149921108 149980258 - MGP_NODShiLtJ_P0063433 Ccdc109b protein_coding protein_coding MGP_NODShiLtJ_T0063434.1 MGP_NODShiLtJ_G0027693.1 mouse_genomes_project 3 149923216 149980199 - MGP_NODShiLtJ_P0063434 Ccdc109b protein_coding protein_coding MGP_NODShiLtJ_T0063435.1 MGP_NODShiLtJ_G0027693.1 mouse_genomes_project 3 149933680 149980334 - MGP_NODShiLtJ_P0063435 Ccdc109b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004148.1 MGP_NODShiLtJ_G0003651.1 mouse_genomes_project 3 15525412 15526580 + Gm37468 antisense antisense MGP_NODShiLtJ_T0063164.1 MGP_NODShiLtJ_G0027647.1 mouse_genomes_project 3 140329615 140342859 + MGP_NODShiLtJ_P0063164 4930432M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0063165.1 MGP_NODShiLtJ_G0027647.1 mouse_genomes_project 3 140330170 140342712 + MGP_NODShiLtJ_P0063165 4930432M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0001317.1 MGP_NODShiLtJ_G0001237.1 mouse_genomes_project 3 150651815 150654654 + TEC TEC MGP_NODShiLtJ_T0007436.1 MGP_NODShiLtJ_G0006089.1 mouse_genomes_project 3 37241801 37245531 - Gm43207 lincRNA lincRNA MGP_NODShiLtJ_T0063050.1 MGP_NODShiLtJ_G0027626.1 mouse_genomes_project 3 134329210 134368250 + MGP_NODShiLtJ_P0063050 Dbt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063051.1 MGP_NODShiLtJ_G0027626.1 mouse_genomes_project 3 134329223 134379071 + MGP_NODShiLtJ_P0063051 Dbt protein_coding protein_coding MGP_NODShiLtJ_T0063052.1 MGP_NODShiLtJ_G0027626.1 mouse_genomes_project 3 134337696 134359525 + Dbt protein_coding retained_intron MGP_NODShiLtJ_T0001207.1 MGP_NODShiLtJ_G0001128.1 mouse_genomes_project 3 74249083 74251100 + TEC TEC MGP_NODShiLtJ_T0061594.1 MGP_NODShiLtJ_G0027263.1 mouse_genomes_project 3 102905501 102971359 - MGP_NODShiLtJ_P0061594 Il6ra protein_coding protein_coding MGP_NODShiLtJ_T0061595.1 MGP_NODShiLtJ_G0027263.1 mouse_genomes_project 3 102912170 102971325 - MGP_NODShiLtJ_P0061595 Il6ra protein_coding protein_coding MGP_NODShiLtJ_T0014173.1 MGP_NODShiLtJ_G0012281.1 mouse_genomes_project 3 143617704 143618350 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014156.1 MGP_NODShiLtJ_G0012264.1 mouse_genomes_project 3 139794417 139795412 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014116.1 MGP_NODShiLtJ_G0012224.1 mouse_genomes_project 3 123456475 123456623 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007383.1 MGP_NODShiLtJ_G0006049.1 mouse_genomes_project 3 2615546 2621638 + Gm17308 lincRNA lincRNA MGP_NODShiLtJ_T0062283.1 MGP_NODShiLtJ_G0027445.1 mouse_genomes_project 3 110906542 110929764 + MGP_NODShiLtJ_P0062283 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062284.1 MGP_NODShiLtJ_G0027445.1 mouse_genomes_project 3 110906626 110929794 + MGP_NODShiLtJ_P0062284 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062285.1 MGP_NODShiLtJ_G0027445.1 mouse_genomes_project 3 110918785 110921917 + protein_coding processed_transcript MGP_NODShiLtJ_T0004215.1 MGP_NODShiLtJ_G0003699.1 mouse_genomes_project 3 97720580 97733580 + 1700036G14Rik antisense antisense MGP_NODShiLtJ_T0013829.1 MGP_NODShiLtJ_G0011937.1 mouse_genomes_project 3 20307238 20307528 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013906.1 MGP_NODShiLtJ_G0012014.1 mouse_genomes_project 3 52494538 52495004 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001356.1 MGP_NODShiLtJ_G0001276.1 mouse_genomes_project 3 177623671 177625920 + TEC TEC MGP_NODShiLtJ_T0013886.1 MGP_NODShiLtJ_G0011994.1 mouse_genomes_project 3 42344263 42344549 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062699.1 MGP_NODShiLtJ_G0027542.1 mouse_genomes_project 3 121227583 121234168 + Wdr77 protein_coding retained_intron MGP_NODShiLtJ_T0062700.1 MGP_NODShiLtJ_G0027542.1 mouse_genomes_project 3 121227589 121238113 + MGP_NODShiLtJ_P0062700 Wdr77 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062701.1 MGP_NODShiLtJ_G0027542.1 mouse_genomes_project 3 121227659 121240848 + MGP_NODShiLtJ_P0062701 Wdr77 protein_coding protein_coding MGP_NODShiLtJ_T0062702.1 MGP_NODShiLtJ_G0027542.1 mouse_genomes_project 3 121232524 121233627 + Wdr77 protein_coding retained_intron MGP_NODShiLtJ_T0014202.1 MGP_NODShiLtJ_G0012310.1 mouse_genomes_project 3 155828291 155828967 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013819.1 MGP_NODShiLtJ_G0011927.1 mouse_genomes_project 3 16143872 16144047 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063133.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139770003 139786086 - MGP_NODShiLtJ_P0063133 Rwdd3 protein_coding protein_coding MGP_NODShiLtJ_T0063134.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139770005 139771426 - Rwdd3 protein_coding retained_intron MGP_NODShiLtJ_T0063135.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139770448 139773416 - MGP_NODShiLtJ_P0063135 Rwdd3 protein_coding protein_coding MGP_NODShiLtJ_T0063136.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139770451 139786079 - MGP_NODShiLtJ_P0063136 Rwdd3 protein_coding protein_coding MGP_NODShiLtJ_T0063137.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139770470 139786085 - MGP_NODShiLtJ_P0063137 Rwdd3 protein_coding protein_coding MGP_NODShiLtJ_T0063138.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139770544 139786085 - MGP_NODShiLtJ_P0063138 Rwdd3 protein_coding protein_coding MGP_NODShiLtJ_T0063139.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139770883 139786086 - MGP_NODShiLtJ_P0063139 Rwdd3 protein_coding protein_coding MGP_NODShiLtJ_T0063140.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139772604 139786086 - Rwdd3 protein_coding retained_intron MGP_NODShiLtJ_T0063141.1 MGP_NODShiLtJ_G0027642.1 mouse_genomes_project 3 139783560 139786085 - Rwdd3 protein_coding retained_intron MGP_NODShiLtJ_T0063513.1 MGP_NODShiLtJ_G0027709.1 mouse_genomes_project 3 153242438 153372740 - MGP_NODShiLtJ_P0063513 Gstcd protein_coding protein_coding MGP_NODShiLtJ_T0063514.1 MGP_NODShiLtJ_G0027709.1 mouse_genomes_project 3 153244365 153372948 - MGP_NODShiLtJ_P0063514 Gstcd protein_coding protein_coding MGP_NODShiLtJ_T0063515.1 MGP_NODShiLtJ_G0027709.1 mouse_genomes_project 3 153258479 153268286 - Gstcd protein_coding retained_intron MGP_NODShiLtJ_T0063516.1 MGP_NODShiLtJ_G0027709.1 mouse_genomes_project 3 153261439 153372662 - Gstcd protein_coding processed_transcript MGP_NODShiLtJ_T0063517.1 MGP_NODShiLtJ_G0027709.1 mouse_genomes_project 3 153360156 153372693 - Gstcd protein_coding retained_intron MGP_NODShiLtJ_T0063518.1 MGP_NODShiLtJ_G0027709.1 mouse_genomes_project 3 153360308 153362012 - Gstcd protein_coding retained_intron MGP_NODShiLtJ_T0013963.1 MGP_NODShiLtJ_G0012071.1 mouse_genomes_project 3 71832090 71832380 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014170.1 MGP_NODShiLtJ_G0012278.1 mouse_genomes_project 3 142619103 142619704 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013868.1 MGP_NODShiLtJ_G0011976.1 mouse_genomes_project 3 39221013 39221512 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060468.1 MGP_NODShiLtJ_G0027020.1 mouse_genomes_project 3 59959230 60132987 - MGP_NODShiLtJ_P0060468 Frem2 protein_coding protein_coding MGP_NODShiLtJ_T0060469.1 MGP_NODShiLtJ_G0027020.1 mouse_genomes_project 3 59962104 59994295 - Frem2 protein_coding processed_transcript MGP_NODShiLtJ_T0060470.1 MGP_NODShiLtJ_G0027020.1 mouse_genomes_project 3 59962208 59971037 - Frem2 protein_coding retained_intron MGP_NODShiLtJ_T0060471.1 MGP_NODShiLtJ_G0027020.1 mouse_genomes_project 3 60121334 60127862 - Frem2 protein_coding retained_intron MGP_NODShiLtJ_T0004350.1 MGP_NODShiLtJ_G0003789.1 mouse_genomes_project 3 176306266 176307426 + Gm16213 antisense antisense MGP_NODShiLtJ_T0014118.1 MGP_NODShiLtJ_G0012226.1 mouse_genomes_project 3 123540438 123540841 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101897.1 MGP_NODShiLtJ_G0040065.1 mouse_genomes_project 3 123589327 123591089 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059836.1 MGP_NODShiLtJ_G0026909.1 mouse_genomes_project 3 20385227 20434681 + MGP_NODShiLtJ_P0059836 Trim55 protein_coding protein_coding MGP_NODShiLtJ_T0059837.1 MGP_NODShiLtJ_G0026909.1 mouse_genomes_project 3 20385261 20390842 + Trim55 protein_coding processed_transcript MGP_NODShiLtJ_T0098363.1 MGP_NODShiLtJ_G0036768.1 mouse_genomes_project 3 120133453 120134385 - Gm43846 sense_intronic sense_intronic MGP_NODShiLtJ_T0061071.1 MGP_NODShiLtJ_G0027164.1 mouse_genomes_project 3 98085019 98098946 - Fam160a1 protein_coding retained_intron MGP_NODShiLtJ_T0061072.1 MGP_NODShiLtJ_G0027164.1 mouse_genomes_project 3 98085021 98267347 - MGP_NODShiLtJ_P0061072 Fam160a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061073.1 MGP_NODShiLtJ_G0027164.1 mouse_genomes_project 3 98085021 98183192 - MGP_NODShiLtJ_P0061073 Fam160a1 protein_coding protein_coding MGP_NODShiLtJ_T0061074.1 MGP_NODShiLtJ_G0027164.1 mouse_genomes_project 3 98085023 98177806 - MGP_NODShiLtJ_P0061074 Fam160a1 protein_coding protein_coding MGP_NODShiLtJ_T0060294.1 MGP_NODShiLtJ_G0026992.1 mouse_genomes_project 3 43910260 43935581 + MGP_NODShiLtJ_P0060294 Hspa4l protein_coding protein_coding MGP_NODShiLtJ_T0060295.1 MGP_NODShiLtJ_G0026992.1 mouse_genomes_project 3 43923443 43961263 + MGP_NODShiLtJ_P0060295 Hspa4l protein_coding protein_coding MGP_NODShiLtJ_T0060296.1 MGP_NODShiLtJ_G0026992.1 mouse_genomes_project 3 43923491 43988769 + MGP_NODShiLtJ_P0060296 Hspa4l protein_coding protein_coding MGP_NODShiLtJ_T0060297.1 MGP_NODShiLtJ_G0026992.1 mouse_genomes_project 3 43923545 43940567 + MGP_NODShiLtJ_P0060297 Hspa4l protein_coding protein_coding MGP_NODShiLtJ_T0060298.1 MGP_NODShiLtJ_G0026992.1 mouse_genomes_project 3 43923644 43937108 + Hspa4l protein_coding retained_intron MGP_NODShiLtJ_T0060299.1 MGP_NODShiLtJ_G0026992.1 mouse_genomes_project 3 43923929 43970728 + MGP_NODShiLtJ_P0060299 Hspa4l protein_coding protein_coding MGP_NODShiLtJ_T0060300.1 MGP_NODShiLtJ_G0026992.1 mouse_genomes_project 3 43952310 43961505 + Hspa4l protein_coding retained_intron MGP_NODShiLtJ_T0060301.1 MGP_NODShiLtJ_G0026992.1 mouse_genomes_project 3 43965150 43967961 + Hspa4l protein_coding retained_intron MGP_NODShiLtJ_T0059745.1 MGP_NODShiLtJ_G0026879.1 mouse_genomes_project 3 8889387 8953699 - MGP_NODShiLtJ_P0059745 Fabp12 protein_coding protein_coding MGP_NODShiLtJ_T0059746.1 MGP_NODShiLtJ_G0026879.1 mouse_genomes_project 3 8891096 8906557 - MGP_NODShiLtJ_P0059746 Fabp12 protein_coding protein_coding MGP_NODShiLtJ_T0059747.1 MGP_NODShiLtJ_G0026879.1 mouse_genomes_project 3 8891096 8906530 - MGP_NODShiLtJ_P0059747 Fabp12 protein_coding protein_coding MGP_NODShiLtJ_T0059748.1 MGP_NODShiLtJ_G0026879.1 mouse_genomes_project 3 8891129 8953690 - MGP_NODShiLtJ_P0059748 Fabp12 protein_coding protein_coding MGP_NODShiLtJ_T0004217.1 MGP_NODShiLtJ_G0003701.1 mouse_genomes_project 3 100923844 100931414 - 1700113A16Rik antisense antisense MGP_NODShiLtJ_T0004218.1 MGP_NODShiLtJ_G0003701.1 mouse_genomes_project 3 100923844 100931321 - 1700113A16Rik antisense antisense MGP_NODShiLtJ_T0004219.1 MGP_NODShiLtJ_G0003701.1 mouse_genomes_project 3 100924297 100931335 - 1700113A16Rik antisense antisense MGP_NODShiLtJ_T0063757.1 MGP_NODShiLtJ_G0027756.1 mouse_genomes_project 3 164295868 164319992 + MGP_NODShiLtJ_P0063757 Gbp7 protein_coding protein_coding MGP_NODShiLtJ_T0004146.1 MGP_NODShiLtJ_G0003649.1 mouse_genomes_project 3 2722527 2794571 - antisense antisense MGP_NODShiLtJ_T0060252.1 MGP_NODShiLtJ_G0026982.1 mouse_genomes_project 3 40256912 40268417 + MGP_NODShiLtJ_P0060252 Bbs12 protein_coding protein_coding MGP_NODShiLtJ_T0060253.1 MGP_NODShiLtJ_G0026982.1 mouse_genomes_project 3 40256914 40268420 + MGP_NODShiLtJ_P0060253 Bbs12 protein_coding protein_coding MGP_NODShiLtJ_T0013857.1 MGP_NODShiLtJ_G0011965.1 mouse_genomes_project 3 34710576 34711348 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059738.1 MGP_NODShiLtJ_G0026875.1 mouse_genomes_project 3 8818157 8822236 - MGP_NODShiLtJ_P0059738 Pmp2 protein_coding protein_coding MGP_NODShiLtJ_T0017839.1 MGP_NODShiLtJ_G0015386.1 mouse_genomes_project 3 123964463 123971151 - Gm12522 processed_transcript processed_transcript MGP_NODShiLtJ_T0062052.1 MGP_NODShiLtJ_G0027393.1 mouse_genomes_project 3 109216197 109227180 - MGP_NODShiLtJ_P0062052 Mllt11 protein_coding protein_coding MGP_NODShiLtJ_T0062053.1 MGP_NODShiLtJ_G0027393.1 mouse_genomes_project 3 109217095 109230691 - MGP_NODShiLtJ_P0062053 Mllt11 protein_coding protein_coding MGP_NODShiLtJ_T0062054.1 MGP_NODShiLtJ_G0027393.1 mouse_genomes_project 3 109217105 109230694 - MGP_NODShiLtJ_P0062054 Mllt11 protein_coding protein_coding MGP_NODShiLtJ_T0062055.1 MGP_NODShiLtJ_G0027393.1 mouse_genomes_project 3 109226588 109228997 - Mllt11 protein_coding processed_transcript MGP_NODShiLtJ_T0062059.1 MGP_NODShiLtJ_G0027393.1 mouse_genomes_project 3 109227548 109228923 - Mllt11 protein_coding processed_transcript MGP_NODShiLtJ_T0062014.1 MGP_NODShiLtJ_G0027386.1 mouse_genomes_project 3 109114813 109119655 + MGP_NODShiLtJ_P0062014 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062015.1 MGP_NODShiLtJ_G0027386.1 mouse_genomes_project 3 109114949 109118092 + MGP_NODShiLtJ_P0062015 protein_coding protein_coding MGP_NODShiLtJ_T0062016.1 MGP_NODShiLtJ_G0027386.1 mouse_genomes_project 3 109116677 109119186 + protein_coding retained_intron MGP_NODShiLtJ_T0062017.1 MGP_NODShiLtJ_G0027386.1 mouse_genomes_project 3 109117608 109118305 + protein_coding processed_transcript MGP_NODShiLtJ_T0062018.1 MGP_NODShiLtJ_G0027386.1 mouse_genomes_project 3 109118091 109119650 + protein_coding retained_intron MGP_NODShiLtJ_T0001328.1 MGP_NODShiLtJ_G0001248.1 mouse_genomes_project 3 153972544 153983452 - TEC TEC MGP_NODShiLtJ_T0100486.1 MGP_NODShiLtJ_G0038880.1 mouse_genomes_project 3 133082404 133082536 + Gm22337 snoRNA snoRNA MGP_NODShiLtJ_T0060421.1 MGP_NODShiLtJ_G0027009.1 mouse_genomes_project 3 57705292 57771203 + Naa15 protein_coding processed_transcript MGP_NODShiLtJ_T0060422.1 MGP_NODShiLtJ_G0027009.1 mouse_genomes_project 3 57705319 57772433 + MGP_NODShiLtJ_P0060422 Naa15 protein_coding protein_coding MGP_NODShiLtJ_T0060423.1 MGP_NODShiLtJ_G0027009.1 mouse_genomes_project 3 57705610 57741692 + MGP_NODShiLtJ_P0060423 Naa15 protein_coding protein_coding MGP_NODShiLtJ_T0060424.1 MGP_NODShiLtJ_G0027009.1 mouse_genomes_project 3 57739991 57742720 + Naa15 protein_coding retained_intron MGP_NODShiLtJ_T0060425.1 MGP_NODShiLtJ_G0027009.1 mouse_genomes_project 3 57740980 57747376 + MGP_NODShiLtJ_P0060425 Naa15 protein_coding protein_coding MGP_NODShiLtJ_T0060426.1 MGP_NODShiLtJ_G0027009.1 mouse_genomes_project 3 57758388 57761963 + Naa15 protein_coding retained_intron MGP_NODShiLtJ_T0060427.1 MGP_NODShiLtJ_G0027009.1 mouse_genomes_project 3 57759380 57761699 + Naa15 protein_coding retained_intron MGP_NODShiLtJ_T0060428.1 MGP_NODShiLtJ_G0027009.1 mouse_genomes_project 3 57768778 57771851 + Naa15 protein_coding retained_intron MGP_NODShiLtJ_T0061108.1 MGP_NODShiLtJ_G0027173.1 mouse_genomes_project 3 99618641 99621296 - MGP_NODShiLtJ_P0061108 protein_coding protein_coding MGP_NODShiLtJ_T0014167.1 MGP_NODShiLtJ_G0012275.1 mouse_genomes_project 3 141854464 141854888 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098323.1 MGP_NODShiLtJ_G0036728.1 mouse_genomes_project 3 113704643 113708980 + Gm43024 sense_intronic sense_intronic MGP_NODShiLtJ_T0059697.1 MGP_NODShiLtJ_G0026861.1 mouse_genomes_project 3 3457384 3457872 + MGP_NODShiLtJ_P0059697 Gm8797 protein_coding protein_coding MGP_NODShiLtJ_T0060475.1 MGP_NODShiLtJ_G0027022.1 mouse_genomes_project 3 60698671 60727051 + Trpc4 protein_coding processed_transcript MGP_NODShiLtJ_T0060476.1 MGP_NODShiLtJ_G0027022.1 mouse_genomes_project 3 60698693 60887602 + MGP_NODShiLtJ_P0060476 Trpc4 protein_coding protein_coding MGP_NODShiLtJ_T0060477.1 MGP_NODShiLtJ_G0027022.1 mouse_genomes_project 3 60698702 60827536 + Trpc4 protein_coding retained_intron MGP_NODShiLtJ_T0060478.1 MGP_NODShiLtJ_G0027022.1 mouse_genomes_project 3 60698740 60887598 + MGP_NODShiLtJ_P0060478 Trpc4 protein_coding protein_coding MGP_NODShiLtJ_T0060479.1 MGP_NODShiLtJ_G0027022.1 mouse_genomes_project 3 60699009 60784032 + Trpc4 protein_coding retained_intron MGP_NODShiLtJ_T0060480.1 MGP_NODShiLtJ_G0027022.1 mouse_genomes_project 3 60699251 60887546 + MGP_NODShiLtJ_P0060480 Trpc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062453.1 MGP_NODShiLtJ_G0027492.1 mouse_genomes_project 3 116165314 116167772 + Igsf3 protein_coding retained_intron MGP_NODShiLtJ_T0062454.1 MGP_NODShiLtJ_G0027492.1 mouse_genomes_project 3 116165314 116256013 + MGP_NODShiLtJ_P0062454 Igsf3 protein_coding protein_coding MGP_NODShiLtJ_T0062455.1 MGP_NODShiLtJ_G0027492.1 mouse_genomes_project 3 116166569 116253098 + MGP_NODShiLtJ_P0062455 Igsf3 protein_coding protein_coding MGP_NODShiLtJ_T0100447.1 MGP_NODShiLtJ_G0038841.1 mouse_genomes_project 3 52441027 52441165 + Gm23891 snoRNA snoRNA MGP_NODShiLtJ_T0001169.1 MGP_NODShiLtJ_G0001091.1 mouse_genomes_project 3 58194829 58196041 - TEC TEC MGP_NODShiLtJ_T0060154.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38677122 38720724 - MGP_NODShiLtJ_P0060154 Dcun1d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060155.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38677843 38720675 - MGP_NODShiLtJ_P0060155 Dcun1d1 protein_coding protein_coding MGP_NODShiLtJ_T0060156.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38677869 38707102 - MGP_NODShiLtJ_P0060156 Dcun1d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060157.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38679872 38720245 - MGP_NODShiLtJ_P0060157 Dcun1d1 protein_coding protein_coding MGP_NODShiLtJ_T0060158.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38679936 38695823 - Dcun1d1 protein_coding processed_transcript MGP_NODShiLtJ_T0060159.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38695121 38720703 - Dcun1d1 protein_coding processed_transcript MGP_NODShiLtJ_T0060160.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38702059 38720712 - Dcun1d1 protein_coding retained_intron MGP_NODShiLtJ_T0060161.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38704911 38717666 - MGP_NODShiLtJ_P0060161 Dcun1d1 protein_coding protein_coding MGP_NODShiLtJ_T0060162.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38704914 38725321 - MGP_NODShiLtJ_P0060162 Dcun1d1 protein_coding protein_coding MGP_NODShiLtJ_T0060163.1 MGP_NODShiLtJ_G0026966.1 mouse_genomes_project 3 38715630 38719369 - Dcun1d1 protein_coding retained_intron MGP_NODShiLtJ_T0062726.1 MGP_NODShiLtJ_G0027551.1 mouse_genomes_project 3 121858034 121925207 - MGP_NODShiLtJ_P0062726 Cept1 protein_coding protein_coding MGP_NODShiLtJ_T0062727.1 MGP_NODShiLtJ_G0027551.1 mouse_genomes_project 3 121858807 121924987 - MGP_NODShiLtJ_P0062727 Cept1 protein_coding protein_coding MGP_NODShiLtJ_T0062728.1 MGP_NODShiLtJ_G0027551.1 mouse_genomes_project 3 121858807 121925136 - MGP_NODShiLtJ_P0062728 Cept1 protein_coding protein_coding MGP_NODShiLtJ_T0062729.1 MGP_NODShiLtJ_G0027551.1 mouse_genomes_project 3 121861078 121925104 - MGP_NODShiLtJ_P0062729 Cept1 protein_coding protein_coding MGP_NODShiLtJ_T0062730.1 MGP_NODShiLtJ_G0027551.1 mouse_genomes_project 3 121881478 121925148 - MGP_NODShiLtJ_P0062730 Cept1 protein_coding protein_coding MGP_NODShiLtJ_T0062731.1 MGP_NODShiLtJ_G0027551.1 mouse_genomes_project 3 121893643 121925123 - MGP_NODShiLtJ_P0062731 Cept1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062732.1 MGP_NODShiLtJ_G0027551.1 mouse_genomes_project 3 121903349 121924997 - MGP_NODShiLtJ_P0062732 Cept1 protein_coding protein_coding MGP_NODShiLtJ_T0014063.1 MGP_NODShiLtJ_G0012171.1 mouse_genomes_project 3 108680957 108681330 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061437.1 MGP_NODShiLtJ_G0027234.1 mouse_genomes_project 3 102152172 102157465 + MGP_NODShiLtJ_P0061437 Scamp3 protein_coding protein_coding MGP_NODShiLtJ_T0061438.1 MGP_NODShiLtJ_G0027234.1 mouse_genomes_project 3 102152189 102157465 + MGP_NODShiLtJ_P0061438 Scamp3 protein_coding protein_coding MGP_NODShiLtJ_T0061439.1 MGP_NODShiLtJ_G0027234.1 mouse_genomes_project 3 102152195 102154365 + Scamp3 protein_coding retained_intron MGP_NODShiLtJ_T0061440.1 MGP_NODShiLtJ_G0027234.1 mouse_genomes_project 3 102152219 102157463 + MGP_NODShiLtJ_P0061440 Scamp3 protein_coding protein_coding MGP_NODShiLtJ_T0061441.1 MGP_NODShiLtJ_G0027234.1 mouse_genomes_project 3 102152230 102154152 + Scamp3 protein_coding retained_intron MGP_NODShiLtJ_T0061442.1 MGP_NODShiLtJ_G0027234.1 mouse_genomes_project 3 102152236 102154364 + Scamp3 protein_coding retained_intron MGP_NODShiLtJ_T0061443.1 MGP_NODShiLtJ_G0027234.1 mouse_genomes_project 3 102152320 102155976 + Scamp3 protein_coding retained_intron MGP_NODShiLtJ_T0061444.1 MGP_NODShiLtJ_G0027234.1 mouse_genomes_project 3 102152457 102155085 + Scamp3 protein_coding retained_intron MGP_NODShiLtJ_T0004180.1 MGP_NODShiLtJ_G0003672.1 mouse_genomes_project 3 44819499 44821954 - antisense antisense MGP_NODShiLtJ_T0001144.1 MGP_NODShiLtJ_G0001067.1 mouse_genomes_project 3 50043845 50047773 + TEC TEC MGP_NODShiLtJ_T0063345.1 MGP_NODShiLtJ_G0027675.1 mouse_genomes_project 3 147198060 147216617 - MGP_NODShiLtJ_P0063345 Larp7 protein_coding protein_coding MGP_NODShiLtJ_T0063346.1 MGP_NODShiLtJ_G0027675.1 mouse_genomes_project 3 147206239 147209620 - Larp7 protein_coding retained_intron MGP_NODShiLtJ_T0063348.1 MGP_NODShiLtJ_G0027675.1 mouse_genomes_project 3 147208543 147216465 - Larp7 protein_coding retained_intron MGP_NODShiLtJ_T0063349.1 MGP_NODShiLtJ_G0027675.1 mouse_genomes_project 3 147209216 147216615 - MGP_NODShiLtJ_P0063349 Larp7 protein_coding protein_coding MGP_NODShiLtJ_T0014211.1 MGP_NODShiLtJ_G0012319.1 mouse_genomes_project 3 157139882 157140041 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061759.1 MGP_NODShiLtJ_G0027287.1 mouse_genomes_project 3 103715245 103721152 + MGP_NODShiLtJ_P0061759 S100a16 protein_coding protein_coding MGP_NODShiLtJ_T0061760.1 MGP_NODShiLtJ_G0027287.1 mouse_genomes_project 3 103715306 103721018 + MGP_NODShiLtJ_P0061760 S100a16 protein_coding protein_coding MGP_NODShiLtJ_T0061761.1 MGP_NODShiLtJ_G0027287.1 mouse_genomes_project 3 103715316 103720739 + S100a16 protein_coding processed_transcript MGP_NODShiLtJ_T0061762.1 MGP_NODShiLtJ_G0027287.1 mouse_genomes_project 3 103716876 103720931 + MGP_NODShiLtJ_P0061762 S100a16 protein_coding protein_coding MGP_NODShiLtJ_T0061763.1 MGP_NODShiLtJ_G0027287.1 mouse_genomes_project 3 103717279 103720433 + MGP_NODShiLtJ_P0061763 S100a16 protein_coding protein_coding MGP_NODShiLtJ_T0061764.1 MGP_NODShiLtJ_G0027287.1 mouse_genomes_project 3 103719143 103720752 + MGP_NODShiLtJ_P0061764 S100a16 protein_coding protein_coding MGP_NODShiLtJ_T0061765.1 MGP_NODShiLtJ_G0027287.1 mouse_genomes_project 3 103719146 103720866 + MGP_NODShiLtJ_P0061765 S100a16 protein_coding protein_coding MGP_NODShiLtJ_T0061766.1 MGP_NODShiLtJ_G0027287.1 mouse_genomes_project 3 103719158 103721155 + MGP_NODShiLtJ_P0061766 S100a16 protein_coding protein_coding MGP_NODShiLtJ_T0014101.1 MGP_NODShiLtJ_G0012209.1 mouse_genomes_project 3 118160209 118160964 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061839.1 MGP_NODShiLtJ_G0027341.1 mouse_genomes_project 3 106504667 106506525 - MGP_NODShiLtJ_P0061839 2310050C09Rik protein_coding protein_coding MGP_NODShiLtJ_T0007500.1 MGP_NODShiLtJ_G0006135.1 mouse_genomes_project 3 71347183 71367904 + Gm34240 lincRNA lincRNA MGP_NODShiLtJ_T0062495.1 MGP_NODShiLtJ_G0027502.1 mouse_genomes_project 3 117905549 117931393 - MGP_NODShiLtJ_P0062495 Nr1h5 protein_coding protein_coding MGP_NODShiLtJ_T0062496.1 MGP_NODShiLtJ_G0027502.1 mouse_genomes_project 3 117906758 117924571 - MGP_NODShiLtJ_P0062496 Nr1h5 protein_coding protein_coding MGP_NODShiLtJ_T0062497.1 MGP_NODShiLtJ_G0027502.1 mouse_genomes_project 3 117906758 117924571 - MGP_NODShiLtJ_P0062497 Nr1h5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062498.1 MGP_NODShiLtJ_G0027502.1 mouse_genomes_project 3 117906758 117924571 - MGP_NODShiLtJ_P0062498 Nr1h5 protein_coding protein_coding MGP_NODShiLtJ_T0062499.1 MGP_NODShiLtJ_G0027502.1 mouse_genomes_project 3 117906758 117924571 - MGP_NODShiLtJ_P0062499 Nr1h5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001146.1 MGP_NODShiLtJ_G0001069.1 mouse_genomes_project 3 52530388 52533111 - TEC TEC MGP_NODShiLtJ_T0063452.1 MGP_NODShiLtJ_G0027696.1 mouse_genomes_project 3 150682711 150701168 + MGP_NODShiLtJ_P0063452 Etnppl protein_coding protein_coding MGP_NODShiLtJ_T0063453.1 MGP_NODShiLtJ_G0027696.1 mouse_genomes_project 3 150682832 150703877 + MGP_NODShiLtJ_P0063453 Etnppl protein_coding protein_coding MGP_NODShiLtJ_T0063454.1 MGP_NODShiLtJ_G0027696.1 mouse_genomes_project 3 150682835 150687912 + Etnppl protein_coding retained_intron MGP_NODShiLtJ_T0063455.1 MGP_NODShiLtJ_G0027696.1 mouse_genomes_project 3 150682862 150687952 + Etnppl protein_coding retained_intron MGP_NODShiLtJ_T0063456.1 MGP_NODShiLtJ_G0027696.1 mouse_genomes_project 3 150682957 150701036 + MGP_NODShiLtJ_P0063456 Etnppl protein_coding protein_coding MGP_NODShiLtJ_T0063457.1 MGP_NODShiLtJ_G0027696.1 mouse_genomes_project 3 150692818 150696023 + MGP_NODShiLtJ_P0063457 Etnppl protein_coding protein_coding MGP_NODShiLtJ_T0014028.1 MGP_NODShiLtJ_G0012136.1 mouse_genomes_project 3 98629233 98629666 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007446.1 MGP_NODShiLtJ_G0006098.1 mouse_genomes_project 3 40604821 40606186 + 4930594O21Rik lincRNA lincRNA MGP_NODShiLtJ_T0007447.1 MGP_NODShiLtJ_G0006098.1 mouse_genomes_project 3 40604831 40605736 + 4930594O21Rik lincRNA lincRNA MGP_NODShiLtJ_T0100453.1 MGP_NODShiLtJ_G0038847.1 mouse_genomes_project 3 63910458 63910588 + Gm22269 snoRNA snoRNA MGP_NODShiLtJ_T0063262.1 MGP_NODShiLtJ_G0027665.1 mouse_genomes_project 3 142291163 142350629 + MGP_NODShiLtJ_P0063262 Prss12 protein_coding protein_coding MGP_NODShiLtJ_T0013938.1 MGP_NODShiLtJ_G0012046.1 mouse_genomes_project 3 64769760 64770256 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013945.1 MGP_NODShiLtJ_G0012053.1 mouse_genomes_project 3 66604872 66606684 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060125.1 MGP_NODShiLtJ_G0026961.1 mouse_genomes_project 3 36395537 36432356 - MGP_NODShiLtJ_P0060125 Ccdc39 protein_coding protein_coding MGP_NODShiLtJ_T0060126.1 MGP_NODShiLtJ_G0026961.1 mouse_genomes_project 3 36395847 36399447 - Ccdc39 protein_coding retained_intron MGP_NODShiLtJ_T0060127.1 MGP_NODShiLtJ_G0026961.1 mouse_genomes_project 3 36403543 36432356 - Ccdc39 protein_coding retained_intron MGP_NODShiLtJ_T0060128.1 MGP_NODShiLtJ_G0026961.1 mouse_genomes_project 3 36405082 36432120 - Ccdc39 protein_coding retained_intron MGP_NODShiLtJ_T0060129.1 MGP_NODShiLtJ_G0026961.1 mouse_genomes_project 3 36410971 36412926 - Ccdc39 protein_coding retained_intron MGP_NODShiLtJ_T0060130.1 MGP_NODShiLtJ_G0026961.1 mouse_genomes_project 3 36425312 36432365 - Ccdc39 protein_coding retained_intron MGP_NODShiLtJ_T0099177.1 MGP_NODShiLtJ_G0037571.1 mouse_genomes_project 3 71690862 71690960 + Gm23500 snRNA snRNA MGP_NODShiLtJ_T0061180.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100634178 100641487 - Rrnad1 protein_coding retained_intron MGP_NODShiLtJ_T0061181.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100634178 100641487 - MGP_NODShiLtJ_P0061181 Rrnad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061182.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100634484 100641504 - MGP_NODShiLtJ_P0061182 Rrnad1 protein_coding protein_coding MGP_NODShiLtJ_T0061183.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100634893 100640721 - Rrnad1 protein_coding retained_intron MGP_NODShiLtJ_T0061184.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100635235 100639618 - MGP_NODShiLtJ_P0061184 Rrnad1 protein_coding protein_coding MGP_NODShiLtJ_T0061185.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100635236 100636853 - Rrnad1 protein_coding processed_transcript MGP_NODShiLtJ_T0061186.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100635240 100641504 - Rrnad1 protein_coding retained_intron MGP_NODShiLtJ_T0061187.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100635240 100642077 - Rrnad1 protein_coding retained_intron MGP_NODShiLtJ_T0061188.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100635360 100641943 - MGP_NODShiLtJ_P0061188 Rrnad1 protein_coding protein_coding MGP_NODShiLtJ_T0061189.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100636630 100638452 - Rrnad1 protein_coding retained_intron MGP_NODShiLtJ_T0061190.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100636803 100639068 - Rrnad1 protein_coding processed_transcript MGP_NODShiLtJ_T0061191.1 MGP_NODShiLtJ_G0027189.1 mouse_genomes_project 3 100636833 100641498 - MGP_NODShiLtJ_P0061191 Rrnad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098322.1 MGP_NODShiLtJ_G0036727.1 mouse_genomes_project 3 112691158 112694244 + Gm43189 sense_intronic sense_intronic MGP_NODShiLtJ_T0063891.1 MGP_NODShiLtJ_G0027787.1 mouse_genomes_project 3 168773542 168776683 + Ctbs protein_coding retained_intron MGP_NODShiLtJ_T0063892.1 MGP_NODShiLtJ_G0027787.1 mouse_genomes_project 3 168774217 168791302 + MGP_NODShiLtJ_P0063892 Ctbs protein_coding protein_coding MGP_NODShiLtJ_T0063893.1 MGP_NODShiLtJ_G0027787.1 mouse_genomes_project 3 168774225 168781085 + MGP_NODShiLtJ_P0063893 Ctbs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063894.1 MGP_NODShiLtJ_G0027787.1 mouse_genomes_project 3 168774240 168791224 + MGP_NODShiLtJ_P0063894 Ctbs protein_coding protein_coding MGP_NODShiLtJ_T0014095.1 MGP_NODShiLtJ_G0012203.1 mouse_genomes_project 3 116916015 116916710 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014075.1 MGP_NODShiLtJ_G0012183.1 mouse_genomes_project 3 110639920 110641037 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013832.1 MGP_NODShiLtJ_G0011940.1 mouse_genomes_project 3 20515019 20515402 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062002.1 MGP_NODShiLtJ_G0027384.1 mouse_genomes_project 3 109044198 109096112 - MGP_NODShiLtJ_P0062002 Pip5k1a protein_coding protein_coding MGP_NODShiLtJ_T0062003.1 MGP_NODShiLtJ_G0027384.1 mouse_genomes_project 3 109044211 109096167 - MGP_NODShiLtJ_P0062003 Pip5k1a protein_coding protein_coding MGP_NODShiLtJ_T0062004.1 MGP_NODShiLtJ_G0027384.1 mouse_genomes_project 3 109044213 109096093 - MGP_NODShiLtJ_P0062004 Pip5k1a protein_coding protein_coding MGP_NODShiLtJ_T0062005.1 MGP_NODShiLtJ_G0027384.1 mouse_genomes_project 3 109044237 109096016 - MGP_NODShiLtJ_P0062005 Pip5k1a protein_coding protein_coding MGP_NODShiLtJ_T0062006.1 MGP_NODShiLtJ_G0027384.1 mouse_genomes_project 3 109057464 109066233 - Pip5k1a protein_coding processed_transcript MGP_NODShiLtJ_T0062007.1 MGP_NODShiLtJ_G0027384.1 mouse_genomes_project 3 109065821 109070942 - Pip5k1a protein_coding retained_intron MGP_NODShiLtJ_T0062008.1 MGP_NODShiLtJ_G0027384.1 mouse_genomes_project 3 109086397 109096060 - Pip5k1a protein_coding processed_transcript MGP_NODShiLtJ_T0014096.1 MGP_NODShiLtJ_G0012204.1 mouse_genomes_project 3 117256313 117256781 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007671.1 MGP_NODShiLtJ_G0006270.1 mouse_genomes_project 3 164970620 165030912 + Gm43614 lincRNA lincRNA MGP_NODShiLtJ_T0060882.1 MGP_NODShiLtJ_G0027120.1 mouse_genomes_project 3 86002763 86207508 - MGP_NODShiLtJ_P0060882 Wdr49 protein_coding protein_coding MGP_NODShiLtJ_T0060883.1 MGP_NODShiLtJ_G0027120.1 mouse_genomes_project 3 86002763 86207837 - MGP_NODShiLtJ_P0060883 Wdr49 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060884.1 MGP_NODShiLtJ_G0027120.1 mouse_genomes_project 3 86127693 86177997 - MGP_NODShiLtJ_P0060884 Wdr49 protein_coding protein_coding MGP_NODShiLtJ_T0060885.1 MGP_NODShiLtJ_G0027120.1 mouse_genomes_project 3 86127693 86207509 - MGP_NODShiLtJ_P0060885 Wdr49 protein_coding protein_coding MGP_NODShiLtJ_T0060886.1 MGP_NODShiLtJ_G0027120.1 mouse_genomes_project 3 86205173 86207924 - Wdr49 protein_coding retained_intron MGP_NODShiLtJ_T0059918.1 MGP_NODShiLtJ_G0026923.1 mouse_genomes_project 3 29120977 29183228 + MGP_NODShiLtJ_P0059918 Nceh1 protein_coding protein_coding MGP_NODShiLtJ_T0059919.1 MGP_NODShiLtJ_G0026923.1 mouse_genomes_project 3 29121016 29164582 + Nceh1 protein_coding retained_intron MGP_NODShiLtJ_T0059920.1 MGP_NODShiLtJ_G0026923.1 mouse_genomes_project 3 29121016 29224073 + MGP_NODShiLtJ_P0059920 Nceh1 protein_coding protein_coding MGP_NODShiLtJ_T0059921.1 MGP_NODShiLtJ_G0026923.1 mouse_genomes_project 3 29121016 29161098 + MGP_NODShiLtJ_P0059921 Nceh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059922.1 MGP_NODShiLtJ_G0026923.1 mouse_genomes_project 3 29126453 29177854 + Nceh1 protein_coding processed_transcript MGP_NODShiLtJ_T0007425.1 MGP_NODShiLtJ_G0006079.1 mouse_genomes_project 3 32160543 32198818 + Mannr lincRNA lincRNA MGP_NODShiLtJ_T0007568.1 MGP_NODShiLtJ_G0006185.1 mouse_genomes_project 3 110578210 110579075 - 4930477E14Rik lincRNA lincRNA MGP_NODShiLtJ_T0004225.1 MGP_NODShiLtJ_G0003707.1 mouse_genomes_project 3 102330537 102340523 + 4731419I09Rik antisense antisense MGP_NODShiLtJ_T0013987.1 MGP_NODShiLtJ_G0012095.1 mouse_genomes_project 3 78758004 78758731 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060686.1 MGP_NODShiLtJ_G0027067.1 mouse_genomes_project 3 68916517 68923427 + MGP_NODShiLtJ_P0060686 Rap2b protein_coding protein_coding MGP_NODShiLtJ_T0014251.1 MGP_NODShiLtJ_G0012359.1 mouse_genomes_project 3 177184693 177184986 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014022.1 MGP_NODShiLtJ_G0012130.1 mouse_genomes_project 3 95984616 95985269 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014041.1 MGP_NODShiLtJ_G0012149.1 mouse_genomes_project 3 103848866 103849019 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099192.1 MGP_NODShiLtJ_G0037586.1 mouse_genomes_project 3 99541237 99541397 + Gm23376 snRNA snRNA MGP_NODShiLtJ_T0001161.1 MGP_NODShiLtJ_G0001084.1 mouse_genomes_project 3 57789199 57792400 + TEC TEC MGP_NODShiLtJ_T0060519.1 MGP_NODShiLtJ_G0027028.1 mouse_genomes_project 3 61373511 61430213 + MGP_NODShiLtJ_P0060519 Smad9 protein_coding protein_coding MGP_NODShiLtJ_T0060870.1 MGP_NODShiLtJ_G0027116.1 mouse_genomes_project 3 82886678 82898003 - MGP_NODShiLtJ_P0060870 Slitrk3 protein_coding protein_coding MGP_NODShiLtJ_T0060871.1 MGP_NODShiLtJ_G0027116.1 mouse_genomes_project 3 82887543 82898863 - MGP_NODShiLtJ_P0060871 Slitrk3 protein_coding protein_coding MGP_NODShiLtJ_T0014048.1 MGP_NODShiLtJ_G0012156.1 mouse_genomes_project 3 105841658 105841959 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061107.1 MGP_NODShiLtJ_G0027172.1 mouse_genomes_project 3 99598996 99609507 + MGP_NODShiLtJ_P0061107 protein_coding protein_coding MGP_NODShiLtJ_T0100454.1 MGP_NODShiLtJ_G0038848.1 mouse_genomes_project 3 72359808 72359966 - Gm23897 snoRNA snoRNA MGP_NODShiLtJ_T0014152.1 MGP_NODShiLtJ_G0012260.1 mouse_genomes_project 3 135174159 135174802 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014078.1 MGP_NODShiLtJ_G0012186.1 mouse_genomes_project 3 112582970 112584107 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101880.1 MGP_NODShiLtJ_G0040048.1 mouse_genomes_project 3 107945752 107946373 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014162.1 MGP_NODShiLtJ_G0012270.1 mouse_genomes_project 3 140851603 140852016 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099183.1 MGP_NODShiLtJ_G0037577.1 mouse_genomes_project 3 90864892 90864996 + Gm24150 snRNA snRNA MGP_NODShiLtJ_T0001227.1 MGP_NODShiLtJ_G0001148.1 mouse_genomes_project 3 100764725 100766993 + TEC TEC MGP_NODShiLtJ_T0014121.1 MGP_NODShiLtJ_G0012229.1 mouse_genomes_project 3 124039575 124039954 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060288.1 MGP_NODShiLtJ_G0026989.1 mouse_genomes_project 3 41984279 42119229 + MGP_NODShiLtJ_P0060288 Fat4 protein_coding protein_coding MGP_NODShiLtJ_T0060289.1 MGP_NODShiLtJ_G0026989.1 mouse_genomes_project 3 41988281 42053472 + Fat4 protein_coding retained_intron MGP_NODShiLtJ_T0007597.1 MGP_NODShiLtJ_G0006209.1 mouse_genomes_project 3 123346751 123359969 - Gm36211 lincRNA lincRNA MGP_NODShiLtJ_T0062030.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155261 109159343 + Sema6c protein_coding processed_transcript MGP_NODShiLtJ_T0062031.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155298 109159228 + Sema6c protein_coding processed_transcript MGP_NODShiLtJ_T0062032.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155298 109163131 + MGP_NODShiLtJ_P0062032 Sema6c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062033.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155298 109168436 + MGP_NODShiLtJ_P0062033 Sema6c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062034.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155305 109159282 + MGP_NODShiLtJ_P0062034 Sema6c protein_coding protein_coding MGP_NODShiLtJ_T0062035.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155309 109168807 + Sema6c protein_coding retained_intron MGP_NODShiLtJ_T0062036.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155309 109168807 + MGP_NODShiLtJ_P0062036 Sema6c protein_coding protein_coding MGP_NODShiLtJ_T0062037.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155309 109168807 + MGP_NODShiLtJ_P0062037 Sema6c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062038.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109155309 109168807 + MGP_NODShiLtJ_P0062038 Sema6c protein_coding protein_coding MGP_NODShiLtJ_T0062039.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109159106 109168807 + MGP_NODShiLtJ_P0062039 Sema6c protein_coding protein_coding MGP_NODShiLtJ_T0062040.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109159106 109168645 + MGP_NODShiLtJ_P0062040 Sema6c protein_coding protein_coding MGP_NODShiLtJ_T0062041.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109159174 109168099 + MGP_NODShiLtJ_P0062041 Sema6c protein_coding protein_coding MGP_NODShiLtJ_T0062042.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109162996 109164923 + Sema6c protein_coding processed_transcript MGP_NODShiLtJ_T0062043.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109165105 109166678 + Sema6c protein_coding retained_intron MGP_NODShiLtJ_T0062044.1 MGP_NODShiLtJ_G0027391.1 mouse_genomes_project 3 109165587 109166759 + Sema6c protein_coding retained_intron MGP_NODShiLtJ_T0062064.1 MGP_NODShiLtJ_G0027396.1 mouse_genomes_project 3 109239792 109250549 - MGP_NODShiLtJ_P0062064 Bnipl protein_coding protein_coding MGP_NODShiLtJ_T0062065.1 MGP_NODShiLtJ_G0027396.1 mouse_genomes_project 3 109239816 109250405 - MGP_NODShiLtJ_P0062065 Bnipl protein_coding protein_coding MGP_NODShiLtJ_T0062066.1 MGP_NODShiLtJ_G0027396.1 mouse_genomes_project 3 109240346 109250492 - MGP_NODShiLtJ_P0062066 Bnipl protein_coding protein_coding MGP_NODShiLtJ_T0062067.1 MGP_NODShiLtJ_G0027396.1 mouse_genomes_project 3 109242439 109250504 - MGP_NODShiLtJ_P0062067 Bnipl protein_coding protein_coding MGP_NODShiLtJ_T0062068.1 MGP_NODShiLtJ_G0027396.1 mouse_genomes_project 3 109244594 109247935 - Bnipl protein_coding retained_intron MGP_NODShiLtJ_T0059925.1 MGP_NODShiLtJ_G0026925.1 mouse_genomes_project 3 29322091 29328750 + MGP_NODShiLtJ_P0059925 Ghsr protein_coding protein_coding MGP_NODShiLtJ_T0062911.1 MGP_NODShiLtJ_G0027598.1 mouse_genomes_project 3 124183911 124195934 + Taf13 protein_coding processed_transcript MGP_NODShiLtJ_T0062912.1 MGP_NODShiLtJ_G0027598.1 mouse_genomes_project 3 124183912 124197406 + Taf13 protein_coding processed_transcript MGP_NODShiLtJ_T0062913.1 MGP_NODShiLtJ_G0027598.1 mouse_genomes_project 3 124183912 124198559 + MGP_NODShiLtJ_P0062913 Taf13 protein_coding protein_coding MGP_NODShiLtJ_T0062914.1 MGP_NODShiLtJ_G0027598.1 mouse_genomes_project 3 124183924 124185516 + Taf13 protein_coding retained_intron MGP_NODShiLtJ_T0062120.1 MGP_NODShiLtJ_G0027406.1 mouse_genomes_project 3 109660629 109690949 + MGP_NODShiLtJ_P0062120 Golph3l protein_coding protein_coding MGP_NODShiLtJ_T0062121.1 MGP_NODShiLtJ_G0027406.1 mouse_genomes_project 3 109660629 109690949 + MGP_NODShiLtJ_P0062121 Golph3l protein_coding protein_coding MGP_NODShiLtJ_T0062122.1 MGP_NODShiLtJ_G0027406.1 mouse_genomes_project 3 109660629 109690944 + MGP_NODShiLtJ_P0062122 Golph3l protein_coding protein_coding MGP_NODShiLtJ_T0062123.1 MGP_NODShiLtJ_G0027406.1 mouse_genomes_project 3 109660664 109689266 + MGP_NODShiLtJ_P0062123 Golph3l protein_coding protein_coding MGP_NODShiLtJ_T0062124.1 MGP_NODShiLtJ_G0027406.1 mouse_genomes_project 3 109660664 109690943 + MGP_NODShiLtJ_P0062124 Golph3l protein_coding protein_coding MGP_NODShiLtJ_T0062125.1 MGP_NODShiLtJ_G0027406.1 mouse_genomes_project 3 109660669 109690942 + MGP_NODShiLtJ_P0062125 Golph3l protein_coding protein_coding MGP_NODShiLtJ_T0062126.1 MGP_NODShiLtJ_G0027406.1 mouse_genomes_project 3 109660676 109690943 + MGP_NODShiLtJ_P0062126 Golph3l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062127.1 MGP_NODShiLtJ_G0027406.1 mouse_genomes_project 3 109660685 109689197 + MGP_NODShiLtJ_P0062127 Golph3l protein_coding protein_coding MGP_NODShiLtJ_T0060616.1 MGP_NODShiLtJ_G0027049.1 mouse_genomes_project 3 65644699 65655392 + MGP_NODShiLtJ_P0060616 Selt protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059791.1 MGP_NODShiLtJ_G0026892.1 mouse_genomes_project 3 14669546 14696001 - MGP_NODShiLtJ_P0059791 Car1 protein_coding protein_coding MGP_NODShiLtJ_T0059792.1 MGP_NODShiLtJ_G0026892.1 mouse_genomes_project 3 14669547 14696002 - MGP_NODShiLtJ_P0059792 Car1 protein_coding protein_coding MGP_NODShiLtJ_T0101894.1 MGP_NODShiLtJ_G0040062.1 mouse_genomes_project 3 121930883 121931314 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010441.1 MGP_NODShiLtJ_G0008574.1 mouse_genomes_project 3 124179697 124179771 - Gm22860 miRNA miRNA MGP_NODShiLtJ_T0063396.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149646826 149731557 - MGP_NODShiLtJ_P0063396 Egf protein_coding protein_coding MGP_NODShiLtJ_T0063397.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149646839 149699566 - MGP_NODShiLtJ_P0063397 Egf protein_coding protein_coding MGP_NODShiLtJ_T0063398.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149646841 149699556 - MGP_NODShiLtJ_P0063398 Egf protein_coding protein_coding MGP_NODShiLtJ_T0063399.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149647598 149650826 - Egf protein_coding retained_intron MGP_NODShiLtJ_T0063400.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149655530 149664475 - Egf protein_coding retained_intron MGP_NODShiLtJ_T0063401.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149663756 149666668 - Egf protein_coding retained_intron MGP_NODShiLtJ_T0063402.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149670851 149699565 - MGP_NODShiLtJ_P0063402 Egf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063403.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149709926 149731557 - Egf protein_coding retained_intron MGP_NODShiLtJ_T0063404.1 MGP_NODShiLtJ_G0027686.1 mouse_genomes_project 3 149711398 149731557 - Egf protein_coding processed_transcript MGP_NODShiLtJ_T0014176.1 MGP_NODShiLtJ_G0012284.1 mouse_genomes_project 3 145991396 145991604 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014061.1 MGP_NODShiLtJ_G0012169.1 mouse_genomes_project 3 108344082 108344873 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014237.1 MGP_NODShiLtJ_G0012345.1 mouse_genomes_project 3 166909410 166910047 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060115.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36366313 36389005 + MGP_NODShiLtJ_P0060115 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060116.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36368894 36399756 + MGP_NODShiLtJ_P0060116 protein_coding protein_coding MGP_NODShiLtJ_T0060117.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36369237 36369933 + protein_coding retained_intron MGP_NODShiLtJ_T0060118.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36369253 36389018 + MGP_NODShiLtJ_P0060118 protein_coding protein_coding MGP_NODShiLtJ_T0060119.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36369275 36392468 + MGP_NODShiLtJ_P0060119 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060120.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36369275 36397667 + MGP_NODShiLtJ_P0060120 protein_coding protein_coding MGP_NODShiLtJ_T0060121.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36369313 36392735 + MGP_NODShiLtJ_P0060121 protein_coding protein_coding MGP_NODShiLtJ_T0060122.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36369325 36387390 + MGP_NODShiLtJ_P0060122 protein_coding protein_coding MGP_NODShiLtJ_T0060123.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36369341 36386856 + MGP_NODShiLtJ_P0060123 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060124.1 MGP_NODShiLtJ_G0026960.1 mouse_genomes_project 3 36382432 36383008 + protein_coding retained_intron MGP_NODShiLtJ_T0060608.1 MGP_NODShiLtJ_G0027047.1 mouse_genomes_project 3 65580567 65586648 - MGP_NODShiLtJ_P0060608 Serp1 protein_coding protein_coding MGP_NODShiLtJ_T0013871.1 MGP_NODShiLtJ_G0011979.1 mouse_genomes_project 3 39552017 39552269 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001300.1 MGP_NODShiLtJ_G0001221.1 mouse_genomes_project 3 146807307 146812151 - TEC TEC MGP_NODShiLtJ_T0001088.1 MGP_NODShiLtJ_G0001011.1 mouse_genomes_project 3 9525087 9526772 - TEC TEC MGP_NODShiLtJ_T0010446.1 MGP_NODShiLtJ_G0008579.1 mouse_genomes_project 3 136597705 136597815 + Gm24155 miRNA miRNA MGP_NODShiLtJ_T0013843.1 MGP_NODShiLtJ_G0011951.1 mouse_genomes_project 3 24535842 24536218 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060895.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86675329 86764148 - MGP_NODShiLtJ_P0060895 Golim4 protein_coding protein_coding MGP_NODShiLtJ_T0060896.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86676915 86764168 - MGP_NODShiLtJ_P0060896 Golim4 protein_coding protein_coding MGP_NODShiLtJ_T0060897.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86677211 86681970 - Golim4 protein_coding retained_intron MGP_NODShiLtJ_T0060898.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86679549 86764156 - MGP_NODShiLtJ_P0060898 Golim4 protein_coding protein_coding MGP_NODShiLtJ_T0060899.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86689734 86695677 - Golim4 protein_coding retained_intron MGP_NODShiLtJ_T0060900.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86697392 86705870 - MGP_NODShiLtJ_P0060900 Golim4 protein_coding protein_coding MGP_NODShiLtJ_T0060901.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86702650 86764127 - Golim4 protein_coding retained_intron MGP_NODShiLtJ_T0060902.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86713295 86763869 - Golim4 protein_coding retained_intron MGP_NODShiLtJ_T0060903.1 MGP_NODShiLtJ_G0027123.1 mouse_genomes_project 3 86762334 86764150 - Golim4 protein_coding retained_intron MGP_NODShiLtJ_T0062877.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123971248 123975590 + MGP_NODShiLtJ_P0062877 Psrc1 protein_coding protein_coding MGP_NODShiLtJ_T0062878.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123971260 123972818 + Psrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0062879.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123971261 123974012 + Psrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0062880.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123971268 123975642 + MGP_NODShiLtJ_P0062880 Psrc1 protein_coding protein_coding MGP_NODShiLtJ_T0062881.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123971288 123973793 + Psrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0062882.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123971325 123972819 + MGP_NODShiLtJ_P0062882 Psrc1 protein_coding protein_coding MGP_NODShiLtJ_T0062883.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123971346 123974032 + Psrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0062884.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123971803 123973354 + Psrc1 protein_coding retained_intron MGP_NODShiLtJ_T0062885.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123972263 123974283 + Psrc1 protein_coding retained_intron MGP_NODShiLtJ_T0062886.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123972266 123974114 + Psrc1 protein_coding retained_intron MGP_NODShiLtJ_T0062887.1 MGP_NODShiLtJ_G0027592.1 mouse_genomes_project 3 123973474 123974122 + Psrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0001361.1 MGP_NODShiLtJ_G0001281.1 mouse_genomes_project 3 180596267 180599406 + TEC TEC MGP_NODShiLtJ_T0014164.1 MGP_NODShiLtJ_G0012272.1 mouse_genomes_project 3 141366270 141366757 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007501.1 MGP_NODShiLtJ_G0006136.1 mouse_genomes_project 3 71391427 71394195 - lincRNA lincRNA MGP_NODShiLtJ_T0004149.1 MGP_NODShiLtJ_G0003652.1 mouse_genomes_project 3 19922690 19936822 + Gm16093 antisense antisense MGP_NODShiLtJ_T0013852.1 MGP_NODShiLtJ_G0011960.1 mouse_genomes_project 3 32019083 32019222 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062128.1 MGP_NODShiLtJ_G0027407.1 mouse_genomes_project 3 109700141 109701139 + Ensa protein_coding TEC MGP_NODShiLtJ_T0062129.1 MGP_NODShiLtJ_G0027407.1 mouse_genomes_project 3 109700159 109707251 + MGP_NODShiLtJ_P0062129 Ensa protein_coding protein_coding MGP_NODShiLtJ_T0062130.1 MGP_NODShiLtJ_G0027407.1 mouse_genomes_project 3 109700168 109707251 + MGP_NODShiLtJ_P0062130 Ensa protein_coding protein_coding MGP_NODShiLtJ_T0062131.1 MGP_NODShiLtJ_G0027407.1 mouse_genomes_project 3 109700174 109702683 + Ensa protein_coding retained_intron MGP_NODShiLtJ_T0001366.1 MGP_NODShiLtJ_G0001286.1 mouse_genomes_project 3 181889017 181891248 - TEC TEC MGP_NODShiLtJ_T0001324.1 MGP_NODShiLtJ_G0001244.1 mouse_genomes_project 3 153019277 153021244 + TEC TEC MGP_NODShiLtJ_T0007411.1 MGP_NODShiLtJ_G0006066.1 mouse_genomes_project 3 19033538 19045842 - 4930433B08Rik lincRNA lincRNA MGP_NODShiLtJ_T0099222.1 MGP_NODShiLtJ_G0037616.1 mouse_genomes_project 3 152000387 152000481 + Gm26103 snRNA snRNA MGP_NODShiLtJ_T0061792.1 MGP_NODShiLtJ_G0027300.1 mouse_genomes_project 3 105482578 105494862 + MGP_NODShiLtJ_P0061792 protein_coding protein_coding MGP_NODShiLtJ_T0014102.1 MGP_NODShiLtJ_G0012210.1 mouse_genomes_project 3 118234925 118235214 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059898.1 MGP_NODShiLtJ_G0026920.1 mouse_genomes_project 3 27062926 28193009 - MGP_NODShiLtJ_P0059898 Nlgn1 protein_coding protein_coding MGP_NODShiLtJ_T0059899.1 MGP_NODShiLtJ_G0026920.1 mouse_genomes_project 3 27069580 27926259 - MGP_NODShiLtJ_P0059899 Nlgn1 protein_coding protein_coding MGP_NODShiLtJ_T0059900.1 MGP_NODShiLtJ_G0026920.1 mouse_genomes_project 3 27069580 27926259 - MGP_NODShiLtJ_P0059900 Nlgn1 protein_coding protein_coding MGP_NODShiLtJ_T0059901.1 MGP_NODShiLtJ_G0026920.1 mouse_genomes_project 3 27071200 27950562 - MGP_NODShiLtJ_P0059901 Nlgn1 protein_coding protein_coding MGP_NODShiLtJ_T0059902.1 MGP_NODShiLtJ_G0026920.1 mouse_genomes_project 3 27924194 28192419 - Nlgn1 protein_coding retained_intron MGP_NODShiLtJ_T0062248.1 MGP_NODShiLtJ_G0027432.1 mouse_genomes_project 3 110419034 110419415 + MGP_NODShiLtJ_P0062248 Hist2h2bb protein_coding protein_coding MGP_NODShiLtJ_T0063224.1 MGP_NODShiLtJ_G0027657.1 mouse_genomes_project 3 141658065 141663048 + MGP_NODShiLtJ_P0063224 Fabp2 protein_coding protein_coding MGP_NODShiLtJ_T0007683.1 MGP_NODShiLtJ_G0006280.1 mouse_genomes_project 3 165689205 165780159 + Gm42705 lincRNA lincRNA MGP_NODShiLtJ_T0062357.1 MGP_NODShiLtJ_G0027460.1 mouse_genomes_project 3 112018466 112031057 + MGP_NODShiLtJ_P0062357 Prkab2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062358.1 MGP_NODShiLtJ_G0027460.1 mouse_genomes_project 3 112018485 112034059 + MGP_NODShiLtJ_P0062358 Prkab2 protein_coding protein_coding MGP_NODShiLtJ_T0062359.1 MGP_NODShiLtJ_G0027460.1 mouse_genomes_project 3 112018487 112031191 + MGP_NODShiLtJ_P0062359 Prkab2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062360.1 MGP_NODShiLtJ_G0027460.1 mouse_genomes_project 3 112026787 112033353 + Prkab2 protein_coding retained_intron MGP_NODShiLtJ_T0062361.1 MGP_NODShiLtJ_G0027460.1 mouse_genomes_project 3 112027597 112033329 + Prkab2 protein_coding retained_intron MGP_NODShiLtJ_T0062362.1 MGP_NODShiLtJ_G0027460.1 mouse_genomes_project 3 112030455 112031306 + Prkab2 protein_coding processed_transcript MGP_NODShiLtJ_T0007595.1 MGP_NODShiLtJ_G0006208.1 mouse_genomes_project 3 122560326 122568747 + A930002I21Rik lincRNA lincRNA MGP_NODShiLtJ_T0007596.1 MGP_NODShiLtJ_G0006208.1 mouse_genomes_project 3 122560328 122567566 + A930002I21Rik lincRNA lincRNA MGP_NODShiLtJ_T0004190.1 MGP_NODShiLtJ_G0003681.1 mouse_genomes_project 3 62069713 62095362 - Gm42609 antisense antisense MGP_NODShiLtJ_T0004191.1 MGP_NODShiLtJ_G0003681.1 mouse_genomes_project 3 62072535 62093264 - Gm42609 antisense antisense MGP_NODShiLtJ_T0060640.1 MGP_NODShiLtJ_G0027056.1 mouse_genomes_project 3 66332824 66334016 - Gpr87 protein_coding retained_intron MGP_NODShiLtJ_T0060641.1 MGP_NODShiLtJ_G0027056.1 mouse_genomes_project 3 66332824 66349043 - MGP_NODShiLtJ_P0060641 Gpr87 protein_coding protein_coding MGP_NODShiLtJ_T0060642.1 MGP_NODShiLtJ_G0027056.1 mouse_genomes_project 3 66332907 66333987 - MGP_NODShiLtJ_P0060642 Gpr87 protein_coding protein_coding MGP_NODShiLtJ_T0014100.1 MGP_NODShiLtJ_G0012208.1 mouse_genomes_project 3 117813892 117814181 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062149.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109840128 109851110 - Tars2 protein_coding retained_intron MGP_NODShiLtJ_T0062150.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109840128 109854954 - MGP_NODShiLtJ_P0062150 Tars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062151.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109840128 109854981 - MGP_NODShiLtJ_P0062151 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0062152.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109840128 109854990 - MGP_NODShiLtJ_P0062152 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0062153.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109840128 109854970 - MGP_NODShiLtJ_P0062153 Tars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062154.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109840128 109854990 - MGP_NODShiLtJ_P0062154 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0062155.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109840171 109842300 - Tars2 protein_coding processed_transcript MGP_NODShiLtJ_T0062156.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109844008 109855002 - MGP_NODShiLtJ_P0062156 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0062157.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109845941 109848690 - Tars2 protein_coding processed_transcript MGP_NODShiLtJ_T0062158.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109847672 109854990 - MGP_NODShiLtJ_P0062158 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0062159.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109847706 109854957 - MGP_NODShiLtJ_P0062159 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0062160.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109848709 109854990 - MGP_NODShiLtJ_P0062160 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0062161.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109848732 109854474 - Tars2 protein_coding processed_transcript MGP_NODShiLtJ_T0062162.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109848734 109854968 - MGP_NODShiLtJ_P0062162 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0062163.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109850370 109851110 - Tars2 protein_coding retained_intron MGP_NODShiLtJ_T0062164.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109850496 109854936 - Tars2 protein_coding processed_transcript MGP_NODShiLtJ_T0062165.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109850831 109854591 - Tars2 protein_coding retained_intron MGP_NODShiLtJ_T0062166.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109850895 109854968 - MGP_NODShiLtJ_P0062166 Tars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062167.1 MGP_NODShiLtJ_G0027411.1 mouse_genomes_project 3 109854924 109860314 - MGP_NODShiLtJ_P0062167 Tars2 protein_coding protein_coding MGP_NODShiLtJ_T0007631.1 MGP_NODShiLtJ_G0006235.1 mouse_genomes_project 3 147648148 147692465 + 9830132P13Rik lincRNA lincRNA MGP_NODShiLtJ_T0014139.1 MGP_NODShiLtJ_G0012247.1 mouse_genomes_project 3 130801273 130801531 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004313.1 MGP_NODShiLtJ_G0003762.1 mouse_genomes_project 3 147219495 147220829 - Gm43729 antisense antisense MGP_NODShiLtJ_T0013966.1 MGP_NODShiLtJ_G0012074.1 mouse_genomes_project 3 74211318 74211742 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061840.1 MGP_NODShiLtJ_G0027342.1 mouse_genomes_project 3 106563011 106563955 - MGP_NODShiLtJ_P0061840 Lce3a protein_coding protein_coding MGP_NODShiLtJ_T0014252.1 MGP_NODShiLtJ_G0012360.1 mouse_genomes_project 3 177610474 177610925 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099211.1 MGP_NODShiLtJ_G0037605.1 mouse_genomes_project 3 119174876 119174978 + Gm23830 snRNA snRNA MGP_NODShiLtJ_T0061539.1 MGP_NODShiLtJ_G0027250.1 mouse_genomes_project 3 102372702 102382243 - MGP_NODShiLtJ_P0061539 Zbtb7b protein_coding protein_coding MGP_NODShiLtJ_T0061540.1 MGP_NODShiLtJ_G0027250.1 mouse_genomes_project 3 102372702 102388400 - MGP_NODShiLtJ_P0061540 Zbtb7b protein_coding protein_coding MGP_NODShiLtJ_T0061541.1 MGP_NODShiLtJ_G0027250.1 mouse_genomes_project 3 102372702 102387165 - MGP_NODShiLtJ_P0061541 Zbtb7b protein_coding protein_coding MGP_NODShiLtJ_T0061542.1 MGP_NODShiLtJ_G0027250.1 mouse_genomes_project 3 102372702 102382725 - MGP_NODShiLtJ_P0061542 Zbtb7b protein_coding protein_coding MGP_NODShiLtJ_T0061543.1 MGP_NODShiLtJ_G0027250.1 mouse_genomes_project 3 102376196 102389740 - MGP_NODShiLtJ_P0061543 Zbtb7b protein_coding protein_coding MGP_NODShiLtJ_T0061544.1 MGP_NODShiLtJ_G0027250.1 mouse_genomes_project 3 102376480 102389697 - MGP_NODShiLtJ_P0061544 Zbtb7b protein_coding protein_coding MGP_NODShiLtJ_T0061545.1 MGP_NODShiLtJ_G0027250.1 mouse_genomes_project 3 102387609 102390838 - Zbtb7b protein_coding processed_transcript MGP_NODShiLtJ_T0101868.1 MGP_NODShiLtJ_G0040036.1 mouse_genomes_project 3 101138960 101148243 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001333.1 MGP_NODShiLtJ_G0001253.1 mouse_genomes_project 3 156588282 156592129 + TEC TEC MGP_NODShiLtJ_T0004170.1 MGP_NODShiLtJ_G0003665.1 mouse_genomes_project 3 38788670 38796650 + Mccc1os antisense antisense MGP_NODShiLtJ_T0004171.1 MGP_NODShiLtJ_G0003665.1 mouse_genomes_project 3 38788750 38799077 + Mccc1os antisense antisense MGP_NODShiLtJ_T0004172.1 MGP_NODShiLtJ_G0003665.1 mouse_genomes_project 3 38789272 38815806 + Mccc1os antisense antisense MGP_NODShiLtJ_T0062062.1 MGP_NODShiLtJ_G0027395.1 mouse_genomes_project 3 109235442 109240120 - MGP_NODShiLtJ_P0062062 Gm128 protein_coding protein_coding MGP_NODShiLtJ_T0062063.1 MGP_NODShiLtJ_G0027395.1 mouse_genomes_project 3 109235629 109240120 - MGP_NODShiLtJ_P0062063 Gm128 protein_coding protein_coding MGP_NODShiLtJ_T0007602.1 MGP_NODShiLtJ_G0006214.1 mouse_genomes_project 3 124744914 124746741 - 4930408K08Rik lincRNA lincRNA MGP_NODShiLtJ_T0101853.1 MGP_NODShiLtJ_G0040021.1 mouse_genomes_project 3 22569729 22571428 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0063458.1 MGP_NODShiLtJ_G0027697.1 mouse_genomes_project 3 150763117 150776697 - MGP_NODShiLtJ_P0063458 Ostc protein_coding protein_coding MGP_NODShiLtJ_T0063459.1 MGP_NODShiLtJ_G0027697.1 mouse_genomes_project 3 150763124 150763825 - Ostc protein_coding retained_intron MGP_NODShiLtJ_T0063460.1 MGP_NODShiLtJ_G0027697.1 mouse_genomes_project 3 150774969 150776669 - Ostc protein_coding retained_intron MGP_NODShiLtJ_T0060852.1 MGP_NODShiLtJ_G0027110.1 mouse_genomes_project 3 77922266 78185993 + MGP_NODShiLtJ_P0060852 Ppm1l protein_coding protein_coding MGP_NODShiLtJ_T0060853.1 MGP_NODShiLtJ_G0027110.1 mouse_genomes_project 3 78118280 78119042 + Ppm1l protein_coding retained_intron MGP_NODShiLtJ_T0060854.1 MGP_NODShiLtJ_G0027110.1 mouse_genomes_project 3 78167554 78178109 + Ppm1l protein_coding processed_transcript MGP_NODShiLtJ_T0060855.1 MGP_NODShiLtJ_G0027110.1 mouse_genomes_project 3 78174188 78178290 + Ppm1l protein_coding retained_intron MGP_NODShiLtJ_T0098026.1 MGP_NODShiLtJ_G0036438.1 mouse_genomes_project 3 101847530 101847650 + n-R5s197 rRNA rRNA MGP_NODShiLtJ_T0001246.1 MGP_NODShiLtJ_G0001167.1 mouse_genomes_project 3 111961853 111965738 + TEC TEC MGP_NODShiLtJ_T0059810.1 MGP_NODShiLtJ_G0026902.1 mouse_genomes_project 3 18577049 18774158 - MGP_NODShiLtJ_P0059810 Cyp7b1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059878.1 MGP_NODShiLtJ_G0026916.1 mouse_genomes_project 3 21041944 21074290 - MGP_NODShiLtJ_P0059878 Cpb1 protein_coding protein_coding MGP_NODShiLtJ_T0059879.1 MGP_NODShiLtJ_G0026916.1 mouse_genomes_project 3 21044213 21046910 - Cpb1 protein_coding retained_intron MGP_NODShiLtJ_T0059880.1 MGP_NODShiLtJ_G0026916.1 mouse_genomes_project 3 21061117 21064148 - Cpb1 protein_coding processed_transcript MGP_NODShiLtJ_T0001312.1 MGP_NODShiLtJ_G0001232.1 mouse_genomes_project 3 149291073 149292175 + TEC TEC MGP_NODShiLtJ_T0013979.1 MGP_NODShiLtJ_G0012087.1 mouse_genomes_project 3 76875381 76875962 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061939.1 MGP_NODShiLtJ_G0027376.1 mouse_genomes_project 3 108680971 108681460 + MGP_NODShiLtJ_P0061939 Gm10972 protein_coding protein_coding MGP_NODShiLtJ_T0014148.1 MGP_NODShiLtJ_G0012256.1 mouse_genomes_project 3 134700298 134700688 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061874.1 MGP_NODShiLtJ_G0027363.1 mouse_genomes_project 3 108229110 108234355 + MGP_NODShiLtJ_P0061874 Them5 protein_coding protein_coding MGP_NODShiLtJ_T0061875.1 MGP_NODShiLtJ_G0027363.1 mouse_genomes_project 3 108229270 108234353 + MGP_NODShiLtJ_P0061875 Them5 protein_coding protein_coding MGP_NODShiLtJ_T0101857.1 MGP_NODShiLtJ_G0040025.1 mouse_genomes_project 3 66791043 66817267 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014153.1 MGP_NODShiLtJ_G0012261.1 mouse_genomes_project 3 135944335 135944777 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059734.1 MGP_NODShiLtJ_G0026873.1 mouse_genomes_project 3 8626226 8631343 + MGP_NODShiLtJ_P0059734 Fabp5 protein_coding protein_coding MGP_NODShiLtJ_T0059735.1 MGP_NODShiLtJ_G0026873.1 mouse_genomes_project 3 8626283 8631071 + Fabp5 protein_coding retained_intron MGP_NODShiLtJ_T0059736.1 MGP_NODShiLtJ_G0026873.1 mouse_genomes_project 3 8626318 8631352 + MGP_NODShiLtJ_P0059736 Fabp5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0007499.1 MGP_NODShiLtJ_G0006134.1 mouse_genomes_project 3 68256701 68264623 + Gm38326 lincRNA lincRNA MGP_NODShiLtJ_T0059966.1 MGP_NODShiLtJ_G0026933.1 mouse_genomes_project 3 31241842 31327555 + MGP_NODShiLtJ_P0059966 Egfem1 protein_coding protein_coding MGP_NODShiLtJ_T0059967.1 MGP_NODShiLtJ_G0026933.1 mouse_genomes_project 3 31242119 31806763 + MGP_NODShiLtJ_P0059967 Egfem1 protein_coding protein_coding MGP_NODShiLtJ_T0059968.1 MGP_NODShiLtJ_G0026933.1 mouse_genomes_project 3 31242383 31907189 + Egfem1 protein_coding retained_intron MGP_NODShiLtJ_T0059969.1 MGP_NODShiLtJ_G0026933.1 mouse_genomes_project 3 31242539 31923679 + MGP_NODShiLtJ_P0059969 Egfem1 protein_coding protein_coding MGP_NODShiLtJ_T0059970.1 MGP_NODShiLtJ_G0026933.1 mouse_genomes_project 3 31242577 31922980 + MGP_NODShiLtJ_P0059970 Egfem1 protein_coding protein_coding MGP_NODShiLtJ_T0059971.1 MGP_NODShiLtJ_G0026933.1 mouse_genomes_project 3 31663964 31883015 + Egfem1 protein_coding processed_transcript MGP_NODShiLtJ_T0059972.1 MGP_NODShiLtJ_G0026933.1 mouse_genomes_project 3 31725081 31923518 + MGP_NODShiLtJ_P0059972 Egfem1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0059973.1 MGP_NODShiLtJ_G0026933.1 mouse_genomes_project 3 31725106 31906296 + MGP_NODShiLtJ_P0059973 Egfem1 protein_coding protein_coding MGP_NODShiLtJ_T0062836.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123638737 123650231 - Ampd2 protein_coding retained_intron MGP_NODShiLtJ_T0062837.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123638737 123651303 - MGP_NODShiLtJ_P0062837 Ampd2 protein_coding protein_coding MGP_NODShiLtJ_T0062838.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123638739 123651327 - MGP_NODShiLtJ_P0062838 Ampd2 protein_coding protein_coding MGP_NODShiLtJ_T0062839.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123638762 123650075 - MGP_NODShiLtJ_P0062839 Ampd2 protein_coding protein_coding MGP_NODShiLtJ_T0062840.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123639419 123640146 - Ampd2 protein_coding retained_intron MGP_NODShiLtJ_T0062841.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123640039 123641108 - Ampd2 protein_coding retained_intron MGP_NODShiLtJ_T0062842.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123641288 123642571 - Ampd2 protein_coding retained_intron MGP_NODShiLtJ_T0062843.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123643143 123644385 - Ampd2 protein_coding retained_intron MGP_NODShiLtJ_T0062844.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123643307 123645294 - Ampd2 protein_coding retained_intron MGP_NODShiLtJ_T0062845.1 MGP_NODShiLtJ_G0027581.1 mouse_genomes_project 3 123644597 123650071 - Ampd2 protein_coding retained_intron MGP_NODShiLtJ_T0014258.1 MGP_NODShiLtJ_G0012366.1 mouse_genomes_project 3 181882539 181882949 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010451.1 MGP_NODShiLtJ_G0008584.1 mouse_genomes_project 3 147207568 147207637 + Mir302a miRNA miRNA MGP_NODShiLtJ_T0007564.1 MGP_NODShiLtJ_G0006182.1 mouse_genomes_project 3 110508606 110525704 + lincRNA lincRNA MGP_NODShiLtJ_T0007567.1 MGP_NODShiLtJ_G0006182.1 mouse_genomes_project 3 110514395 110525703 + lincRNA lincRNA MGP_NODShiLtJ_T0062286.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110937780 110948446 + MGP_NODShiLtJ_P0062286 Pias3 protein_coding protein_coding MGP_NODShiLtJ_T0062287.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110937838 110947958 + MGP_NODShiLtJ_P0062287 Pias3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062288.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110938471 110941071 + MGP_NODShiLtJ_P0062288 Pias3 protein_coding protein_coding MGP_NODShiLtJ_T0062289.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110938478 110948554 + MGP_NODShiLtJ_P0062289 Pias3 protein_coding protein_coding MGP_NODShiLtJ_T0062290.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110938512 110948457 + MGP_NODShiLtJ_P0062290 Pias3 protein_coding protein_coding MGP_NODShiLtJ_T0062291.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110938528 110941362 + Pias3 protein_coding retained_intron MGP_NODShiLtJ_T0062292.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110938589 110943071 + MGP_NODShiLtJ_P0062292 Pias3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062293.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110941857 110946304 + Pias3 protein_coding retained_intron MGP_NODShiLtJ_T0062294.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110942732 110946369 + Pias3 protein_coding retained_intron MGP_NODShiLtJ_T0062295.1 MGP_NODShiLtJ_G0027446.1 mouse_genomes_project 3 110946648 110947617 + MGP_NODShiLtJ_P0062295 Pias3 protein_coding protein_coding MGP_NODShiLtJ_T0017827.1 MGP_NODShiLtJ_G0015381.1 mouse_genomes_project 3 115128841 115131302 + 4930406D18Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017828.1 MGP_NODShiLtJ_G0015381.1 mouse_genomes_project 3 115128875 115141013 + 4930406D18Rik processed_transcript lincRNA MGP_NODShiLtJ_T0061445.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102157842 102159378 + MGP_NODShiLtJ_P0061445 Fam189b protein_coding protein_coding MGP_NODShiLtJ_T0061446.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102157902 102164802 + MGP_NODShiLtJ_P0061446 Fam189b protein_coding protein_coding MGP_NODShiLtJ_T0061447.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102157903 102164800 + MGP_NODShiLtJ_P0061447 Fam189b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061448.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102158279 102164801 + MGP_NODShiLtJ_P0061448 Fam189b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061449.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102158332 102164799 + MGP_NODShiLtJ_P0061449 Fam189b protein_coding protein_coding MGP_NODShiLtJ_T0061450.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102158340 102164806 + MGP_NODShiLtJ_P0061450 Fam189b protein_coding protein_coding MGP_NODShiLtJ_T0061451.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102158928 102160468 + Fam189b protein_coding retained_intron MGP_NODShiLtJ_T0061452.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102162886 102163988 + Fam189b protein_coding retained_intron MGP_NODShiLtJ_T0061453.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102163444 102163987 + Fam189b protein_coding retained_intron MGP_NODShiLtJ_T0061454.1 MGP_NODShiLtJ_G0027235.1 mouse_genomes_project 3 102163494 102164291 + Fam189b protein_coding processed_transcript MGP_NODShiLtJ_T0014008.1 MGP_NODShiLtJ_G0012116.1 mouse_genomes_project 3 89478562 89479974 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062915.1 MGP_NODShiLtJ_G0027599.1 mouse_genomes_project 3 124206671 124261955 + MGP_NODShiLtJ_P0062915 Wdr47 protein_coding protein_coding MGP_NODShiLtJ_T0062916.1 MGP_NODShiLtJ_G0027599.1 mouse_genomes_project 3 124206744 124234937 + MGP_NODShiLtJ_P0062916 Wdr47 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062917.1 MGP_NODShiLtJ_G0027599.1 mouse_genomes_project 3 124206781 124230724 + Wdr47 protein_coding retained_intron MGP_NODShiLtJ_T0062918.1 MGP_NODShiLtJ_G0027599.1 mouse_genomes_project 3 124235133 124240960 + Wdr47 protein_coding processed_transcript MGP_NODShiLtJ_T0062919.1 MGP_NODShiLtJ_G0027599.1 mouse_genomes_project 3 124235514 124243848 + Wdr47 protein_coding retained_intron MGP_NODShiLtJ_T0062920.1 MGP_NODShiLtJ_G0027599.1 mouse_genomes_project 3 124239629 124249442 + Wdr47 protein_coding processed_transcript MGP_NODShiLtJ_T0062921.1 MGP_NODShiLtJ_G0027599.1 mouse_genomes_project 3 124243496 124254158 + Wdr47 protein_coding retained_intron MGP_NODShiLtJ_T0017823.1 MGP_NODShiLtJ_G0015379.1 mouse_genomes_project 3 108988957 108990409 + 4930481B07Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017824.1 MGP_NODShiLtJ_G0015379.1 mouse_genomes_project 3 108989581 108993483 + 4930481B07Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0062633.1 MGP_NODShiLtJ_G0027526.1 mouse_genomes_project 3 119938987 119943950 + MGP_NODShiLtJ_P0062633 Ppm1j protein_coding protein_coding MGP_NODShiLtJ_T0062634.1 MGP_NODShiLtJ_G0027526.1 mouse_genomes_project 3 119943540 119943950 + Ppm1j protein_coding retained_intron MGP_NODShiLtJ_T0059855.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20762598 20804434 - MGP_NODShiLtJ_P0059855 Hps3 protein_coding protein_coding MGP_NODShiLtJ_T0059856.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20762604 20804399 - Hps3 protein_coding retained_intron MGP_NODShiLtJ_T0059857.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20764804 20783440 - Hps3 protein_coding processed_transcript MGP_NODShiLtJ_T0059858.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20764807 20804421 - MGP_NODShiLtJ_P0059858 Hps3 protein_coding protein_coding MGP_NODShiLtJ_T0059859.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20770978 20782246 - Hps3 protein_coding processed_transcript MGP_NODShiLtJ_T0059860.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20780543 20804421 - Hps3 protein_coding retained_intron MGP_NODShiLtJ_T0059861.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20781838 20804413 - Hps3 protein_coding retained_intron MGP_NODShiLtJ_T0059862.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20784265 20804421 - Hps3 protein_coding retained_intron MGP_NODShiLtJ_T0059863.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20784530 20804415 - Hps3 protein_coding processed_transcript MGP_NODShiLtJ_T0059864.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20785673 20804413 - Hps3 protein_coding retained_intron MGP_NODShiLtJ_T0059865.1 MGP_NODShiLtJ_G0026912.1 mouse_genomes_project 3 20803946 20804421 - Hps3 protein_coding processed_transcript MGP_NODShiLtJ_T0062635.1 MGP_NODShiLtJ_G0027527.1 mouse_genomes_project 3 119946923 119952394 + MGP_NODShiLtJ_P0062635 Rhoc protein_coding protein_coding MGP_NODShiLtJ_T0062636.1 MGP_NODShiLtJ_G0027527.1 mouse_genomes_project 3 119947159 119950909 + MGP_NODShiLtJ_P0062636 Rhoc protein_coding protein_coding MGP_NODShiLtJ_T0062637.1 MGP_NODShiLtJ_G0027527.1 mouse_genomes_project 3 119949914 119950812 + Rhoc protein_coding retained_intron MGP_NODShiLtJ_T0014086.1 MGP_NODShiLtJ_G0012194.1 mouse_genomes_project 3 114137145 114137800 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060857.1 MGP_NODShiLtJ_G0027112.1 mouse_genomes_project 3 78378692 78381168 + Nmd3 protein_coding retained_intron MGP_NODShiLtJ_T0060858.1 MGP_NODShiLtJ_G0027112.1 mouse_genomes_project 3 78378692 78418873 + MGP_NODShiLtJ_P0060858 Nmd3 protein_coding protein_coding MGP_NODShiLtJ_T0060859.1 MGP_NODShiLtJ_G0027112.1 mouse_genomes_project 3 78378739 78393248 + MGP_NODShiLtJ_P0060859 Nmd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060860.1 MGP_NODShiLtJ_G0027112.1 mouse_genomes_project 3 78378790 78387074 + MGP_NODShiLtJ_P0060860 Nmd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060861.1 MGP_NODShiLtJ_G0027112.1 mouse_genomes_project 3 78378797 78388514 + Nmd3 protein_coding retained_intron MGP_NODShiLtJ_T0060862.1 MGP_NODShiLtJ_G0027112.1 mouse_genomes_project 3 78378962 78382949 + MGP_NODShiLtJ_P0060862 Nmd3 protein_coding protein_coding MGP_NODShiLtJ_T0060863.1 MGP_NODShiLtJ_G0027112.1 mouse_genomes_project 3 78380949 78397964 + Nmd3 protein_coding retained_intron MGP_NODShiLtJ_T0060864.1 MGP_NODShiLtJ_G0027112.1 mouse_genomes_project 3 78407302 78409939 + Nmd3 protein_coding retained_intron MGP_NODShiLtJ_T0060399.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57524769 57616849 - MGP_NODShiLtJ_P0060399 Elf2 protein_coding protein_coding MGP_NODShiLtJ_T0060400.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57527279 57599004 - MGP_NODShiLtJ_P0060400 Elf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060401.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57527280 57616830 - MGP_NODShiLtJ_P0060401 Elf2 protein_coding protein_coding MGP_NODShiLtJ_T0060402.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57527712 57549303 - MGP_NODShiLtJ_P0060402 Elf2 protein_coding protein_coding MGP_NODShiLtJ_T0060403.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57527714 57549463 - MGP_NODShiLtJ_P0060403 Elf2 protein_coding protein_coding MGP_NODShiLtJ_T0060404.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57527714 57549402 - MGP_NODShiLtJ_P0060404 Elf2 protein_coding protein_coding MGP_NODShiLtJ_T0060405.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57527734 57598962 - MGP_NODShiLtJ_P0060405 Elf2 protein_coding protein_coding MGP_NODShiLtJ_T0060406.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57530734 57532291 - Elf2 protein_coding retained_intron MGP_NODShiLtJ_T0060407.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57536913 57616844 - MGP_NODShiLtJ_P0060407 Elf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060408.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57536913 57549256 - MGP_NODShiLtJ_P0060408 Elf2 protein_coding protein_coding MGP_NODShiLtJ_T0060409.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57536929 57616747 - Elf2 protein_coding processed_transcript MGP_NODShiLtJ_T0060410.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57536929 57549312 - MGP_NODShiLtJ_P0060410 Elf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060411.1 MGP_NODShiLtJ_G0027006.1 mouse_genomes_project 3 57537093 57549332 - MGP_NODShiLtJ_P0060411 Elf2 protein_coding protein_coding MGP_NODShiLtJ_T0014104.1 MGP_NODShiLtJ_G0012212.1 mouse_genomes_project 3 118957896 118958361 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059799.1 MGP_NODShiLtJ_G0026895.1 mouse_genomes_project 3 15250784 15288401 - MGP_NODShiLtJ_P0059799 Gm9733 protein_coding protein_coding MGP_NODShiLtJ_T0100501.1 MGP_NODShiLtJ_G0038895.1 mouse_genomes_project 3 170902630 170902762 - Gm23131 snoRNA snoRNA MGP_NODShiLtJ_T0062733.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925202 121955030 + MGP_NODShiLtJ_P0062733 Dram2 protein_coding protein_coding MGP_NODShiLtJ_T0062734.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925231 121945204 + Dram2 protein_coding retained_intron MGP_NODShiLtJ_T0062735.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925235 121932691 + MGP_NODShiLtJ_P0062735 Dram2 protein_coding protein_coding MGP_NODShiLtJ_T0062736.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925268 121953759 + MGP_NODShiLtJ_P0062736 Dram2 protein_coding protein_coding MGP_NODShiLtJ_T0062737.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925274 121945045 + Dram2 protein_coding retained_intron MGP_NODShiLtJ_T0062738.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925276 121953759 + MGP_NODShiLtJ_P0062738 Dram2 protein_coding protein_coding MGP_NODShiLtJ_T0062739.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925281 121949601 + MGP_NODShiLtJ_P0062739 Dram2 protein_coding protein_coding MGP_NODShiLtJ_T0062740.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925281 121932659 + MGP_NODShiLtJ_P0062740 Dram2 protein_coding protein_coding MGP_NODShiLtJ_T0062741.1 MGP_NODShiLtJ_G0027552.1 mouse_genomes_project 3 121925285 121949538 + MGP_NODShiLtJ_P0062741 Dram2 protein_coding protein_coding MGP_NODShiLtJ_T0064206.1 MGP_NODShiLtJ_G0027833.1 mouse_genomes_project 3 183808629 183859205 + MGP_NODShiLtJ_P0064206 protein_coding protein_coding MGP_NODShiLtJ_T0060585.1 MGP_NODShiLtJ_G0027043.1 mouse_genomes_project 3 64572227 64608500 - MGP_NODShiLtJ_P0060585 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060586.1 MGP_NODShiLtJ_G0027043.1 mouse_genomes_project 3 64572271 64608047 - MGP_NODShiLtJ_P0060586 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060587.1 MGP_NODShiLtJ_G0027043.1 mouse_genomes_project 3 64579705 64608236 - MGP_NODShiLtJ_P0060587 protein_coding protein_coding MGP_NODShiLtJ_T0060588.1 MGP_NODShiLtJ_G0027043.1 mouse_genomes_project 3 64586644 64608238 - MGP_NODShiLtJ_P0060588 protein_coding protein_coding MGP_NODShiLtJ_T0062327.1 MGP_NODShiLtJ_G0027454.1 mouse_genomes_project 3 111173106 111186691 - MGP_NODShiLtJ_P0062327 Gja8 protein_coding protein_coding MGP_NODShiLtJ_T0004196.1 MGP_NODShiLtJ_G0003685.1 mouse_genomes_project 3 68532927 68535075 - Gm37035 antisense antisense MGP_NODShiLtJ_T0062102.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109473964 109531831 + Arnt protein_coding retained_intron MGP_NODShiLtJ_T0062103.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109473964 109535775 + MGP_NODShiLtJ_P0062103 Arnt protein_coding protein_coding MGP_NODShiLtJ_T0062104.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109473966 109537439 + MGP_NODShiLtJ_P0062104 Arnt protein_coding protein_coding MGP_NODShiLtJ_T0062105.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109473980 109537436 + MGP_NODShiLtJ_P0062105 Arnt protein_coding protein_coding MGP_NODShiLtJ_T0062106.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109474004 109535779 + MGP_NODShiLtJ_P0062106 Arnt protein_coding protein_coding MGP_NODShiLtJ_T0062107.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109474004 109500501 + MGP_NODShiLtJ_P0062107 Arnt protein_coding protein_coding MGP_NODShiLtJ_T0062108.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109474095 109532898 + Arnt protein_coding retained_intron MGP_NODShiLtJ_T0062109.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109505911 109535775 + Arnt protein_coding retained_intron MGP_NODShiLtJ_T0062110.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109512555 109518720 + Arnt protein_coding retained_intron MGP_NODShiLtJ_T0062111.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109514582 109526328 + MGP_NODShiLtJ_P0062111 Arnt protein_coding protein_coding MGP_NODShiLtJ_T0062112.1 MGP_NODShiLtJ_G0027402.1 mouse_genomes_project 3 109528421 109529423 + Arnt protein_coding retained_intron MGP_NODShiLtJ_T0014242.1 MGP_NODShiLtJ_G0012350.1 mouse_genomes_project 3 169557730 169558181 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062922.1 MGP_NODShiLtJ_G0027600.1 mouse_genomes_project 3 124270120 124296530 + MGP_NODShiLtJ_P0062922 Clcc1 protein_coding protein_coding MGP_NODShiLtJ_T0062923.1 MGP_NODShiLtJ_G0027600.1 mouse_genomes_project 3 124270156 124279107 + Clcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0062924.1 MGP_NODShiLtJ_G0027600.1 mouse_genomes_project 3 124270164 124285035 + Clcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0062925.1 MGP_NODShiLtJ_G0027600.1 mouse_genomes_project 3 124270165 124296526 + MGP_NODShiLtJ_P0062925 Clcc1 protein_coding protein_coding MGP_NODShiLtJ_T0062926.1 MGP_NODShiLtJ_G0027600.1 mouse_genomes_project 3 124270165 124279656 + MGP_NODShiLtJ_P0062926 Clcc1 protein_coding protein_coding MGP_NODShiLtJ_T0062927.1 MGP_NODShiLtJ_G0027600.1 mouse_genomes_project 3 124270197 124295702 + MGP_NODShiLtJ_P0062927 Clcc1 protein_coding protein_coding MGP_NODShiLtJ_T0062928.1 MGP_NODShiLtJ_G0027600.1 mouse_genomes_project 3 124279299 124285773 + Clcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0062929.1 MGP_NODShiLtJ_G0027600.1 mouse_genomes_project 3 124284808 124285779 + Clcc1 protein_coding retained_intron MGP_NODShiLtJ_T0063381.1 MGP_NODShiLtJ_G0027683.1 mouse_genomes_project 3 149121209 149141988 + MGP_NODShiLtJ_P0063381 Pitx2 protein_coding protein_coding MGP_NODShiLtJ_T0063382.1 MGP_NODShiLtJ_G0027683.1 mouse_genomes_project 3 149121253 149141976 + MGP_NODShiLtJ_P0063382 Pitx2 protein_coding protein_coding MGP_NODShiLtJ_T0063383.1 MGP_NODShiLtJ_G0027683.1 mouse_genomes_project 3 149121257 149141989 + MGP_NODShiLtJ_P0063383 Pitx2 protein_coding protein_coding MGP_NODShiLtJ_T0063384.1 MGP_NODShiLtJ_G0027683.1 mouse_genomes_project 3 149121300 149125909 + MGP_NODShiLtJ_P0063384 Pitx2 protein_coding protein_coding MGP_NODShiLtJ_T0063385.1 MGP_NODShiLtJ_G0027683.1 mouse_genomes_project 3 149125278 149141295 + MGP_NODShiLtJ_P0063385 Pitx2 protein_coding protein_coding MGP_NODShiLtJ_T0063386.1 MGP_NODShiLtJ_G0027683.1 mouse_genomes_project 3 149136329 149139172 + Pitx2 protein_coding retained_intron MGP_NODShiLtJ_T0063387.1 MGP_NODShiLtJ_G0027683.1 mouse_genomes_project 3 149136369 149141986 + MGP_NODShiLtJ_P0063387 Pitx2 protein_coding protein_coding MGP_NODShiLtJ_T0063388.1 MGP_NODShiLtJ_G0027683.1 mouse_genomes_project 3 149136672 149139022 + MGP_NODShiLtJ_P0063388 Pitx2 protein_coding protein_coding MGP_NODShiLtJ_T0100506.1 MGP_NODShiLtJ_G0038900.1 mouse_genomes_project 3 177369068 177369149 - Gm24494 snoRNA snoRNA MGP_NODShiLtJ_T0060382.1 MGP_NODShiLtJ_G0027002.1 mouse_genomes_project 3 51380503 51388391 - MGP_NODShiLtJ_P0060382 Pabpc4l protein_coding protein_coding MGP_NODShiLtJ_T0060383.1 MGP_NODShiLtJ_G0027002.1 mouse_genomes_project 3 51380503 51388113 - MGP_NODShiLtJ_P0060383 Pabpc4l protein_coding protein_coding MGP_NODShiLtJ_T0060384.1 MGP_NODShiLtJ_G0027002.1 mouse_genomes_project 3 51386862 51388113 - MGP_NODShiLtJ_P0060384 Pabpc4l protein_coding protein_coding MGP_NODShiLtJ_T0060385.1 MGP_NODShiLtJ_G0027002.1 mouse_genomes_project 3 51387226 51388092 - MGP_NODShiLtJ_P0060385 Pabpc4l protein_coding protein_coding MGP_NODShiLtJ_T0061122.1 MGP_NODShiLtJ_G0027178.1 mouse_genomes_project 3 100127966 100167059 + MGP_NODShiLtJ_P0061122 Fcrl5 protein_coding protein_coding MGP_NODShiLtJ_T0061123.1 MGP_NODShiLtJ_G0027178.1 mouse_genomes_project 3 100128038 100151042 + MGP_NODShiLtJ_P0061123 Fcrl5 protein_coding protein_coding MGP_NODShiLtJ_T0061124.1 MGP_NODShiLtJ_G0027178.1 mouse_genomes_project 3 100128038 100151042 + MGP_NODShiLtJ_P0061124 Fcrl5 protein_coding protein_coding MGP_NODShiLtJ_T0061125.1 MGP_NODShiLtJ_G0027178.1 mouse_genomes_project 3 100128038 100151042 + MGP_NODShiLtJ_P0061125 Fcrl5 protein_coding protein_coding MGP_NODShiLtJ_T0014184.1 MGP_NODShiLtJ_G0012292.1 mouse_genomes_project 3 150175848 150176441 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061827.1 MGP_NODShiLtJ_G0027330.1 mouse_genomes_project 3 106294326 106296098 - MGP_NODShiLtJ_P0061827 Lce1d protein_coding protein_coding MGP_NODShiLtJ_T0100446.1 MGP_NODShiLtJ_G0038840.1 mouse_genomes_project 3 51196440 51196572 + Gm26081 snoRNA snoRNA MGP_NODShiLtJ_T0014180.1 MGP_NODShiLtJ_G0012288.1 mouse_genomes_project 3 148846862 148848182 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100439.1 MGP_NODShiLtJ_G0038833.1 mouse_genomes_project 3 29872834 29872995 + Gm26040 snoRNA snoRNA MGP_NODShiLtJ_T0014059.1 MGP_NODShiLtJ_G0012167.1 mouse_genomes_project 3 107210436 107210895 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061381.1 MGP_NODShiLtJ_G0027225.1 mouse_genomes_project 3 101846127 101856244 - MGP_NODShiLtJ_P0061381 Msto1 protein_coding protein_coding MGP_NODShiLtJ_T0061382.1 MGP_NODShiLtJ_G0027225.1 mouse_genomes_project 3 101849646 101854387 - Msto1 protein_coding retained_intron MGP_NODShiLtJ_T0061383.1 MGP_NODShiLtJ_G0027225.1 mouse_genomes_project 3 101851927 101856312 - MGP_NODShiLtJ_P0061383 Msto1 protein_coding protein_coding MGP_NODShiLtJ_T0061384.1 MGP_NODShiLtJ_G0027225.1 mouse_genomes_project 3 101851956 101856216 - Msto1 protein_coding retained_intron MGP_NODShiLtJ_T0061385.1 MGP_NODShiLtJ_G0027225.1 mouse_genomes_project 3 101853671 101856195 - Msto1 protein_coding retained_intron MGP_NODShiLtJ_T0061861.1 MGP_NODShiLtJ_G0027356.1 mouse_genomes_project 3 107232713 107239669 + MGP_NODShiLtJ_P0061861 S100a11 protein_coding protein_coding MGP_NODShiLtJ_T0062217.1 MGP_NODShiLtJ_G0027421.1 mouse_genomes_project 3 110137646 110199728 - MGP_NODShiLtJ_P0062217 Vps45 protein_coding protein_coding MGP_NODShiLtJ_T0062218.1 MGP_NODShiLtJ_G0027421.1 mouse_genomes_project 3 110186534 110199092 - Vps45 protein_coding retained_intron MGP_NODShiLtJ_T0062219.1 MGP_NODShiLtJ_G0027421.1 mouse_genomes_project 3 110198148 110198981 - Vps45 protein_coding processed_transcript MGP_NODShiLtJ_T0061519.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102331229 102342681 - MGP_NODShiLtJ_P0061519 Adam15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061520.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332329 102342688 - MGP_NODShiLtJ_P0061520 Adam15 protein_coding protein_coding MGP_NODShiLtJ_T0061521.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332329 102342695 - MGP_NODShiLtJ_P0061521 Adam15 protein_coding protein_coding MGP_NODShiLtJ_T0061522.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332330 102333847 - Adam15 protein_coding processed_transcript MGP_NODShiLtJ_T0061523.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332333 102333130 - Adam15 protein_coding processed_transcript MGP_NODShiLtJ_T0061524.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332333 102342658 - MGP_NODShiLtJ_P0061524 Adam15 protein_coding protein_coding MGP_NODShiLtJ_T0061525.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332337 102342674 - MGP_NODShiLtJ_P0061525 Adam15 protein_coding protein_coding MGP_NODShiLtJ_T0061526.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332434 102333042 - Adam15 protein_coding retained_intron MGP_NODShiLtJ_T0061527.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332604 102333609 - Adam15 protein_coding retained_intron MGP_NODShiLtJ_T0061528.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102332763 102336369 - Adam15 protein_coding retained_intron MGP_NODShiLtJ_T0061529.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102335421 102342673 - Adam15 protein_coding retained_intron MGP_NODShiLtJ_T0061530.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102339217 102342659 - Adam15 protein_coding retained_intron MGP_NODShiLtJ_T0061531.1 MGP_NODShiLtJ_G0027247.1 mouse_genomes_project 3 102341209 102341799 - Adam15 protein_coding processed_transcript MGP_NODShiLtJ_T0001370.1 MGP_NODShiLtJ_G0001290.1 mouse_genomes_project 3 182217422 182220432 + TEC TEC MGP_NODShiLtJ_T0007441.1 MGP_NODShiLtJ_G0006093.1 mouse_genomes_project 3 38385415 38398092 - lincRNA lincRNA MGP_NODShiLtJ_T0062563.1 MGP_NODShiLtJ_G0027512.1 mouse_genomes_project 3 118757999 118770042 - Olfml3 protein_coding processed_transcript MGP_NODShiLtJ_T0062564.1 MGP_NODShiLtJ_G0027512.1 mouse_genomes_project 3 118767465 118773809 - MGP_NODShiLtJ_P0062564 Olfml3 protein_coding protein_coding MGP_NODShiLtJ_T0062565.1 MGP_NODShiLtJ_G0027512.1 mouse_genomes_project 3 118767478 118768352 - MGP_NODShiLtJ_P0062565 Olfml3 protein_coding protein_coding MGP_NODShiLtJ_T0062566.1 MGP_NODShiLtJ_G0027512.1 mouse_genomes_project 3 118769512 118773776 - Olfml3 protein_coding retained_intron MGP_NODShiLtJ_T0064066.1 MGP_NODShiLtJ_G0027811.1 mouse_genomes_project 3 176197393 176370294 - MGP_NODShiLtJ_P0064066 St6galnac5 protein_coding protein_coding MGP_NODShiLtJ_T0064067.1 MGP_NODShiLtJ_G0027811.1 mouse_genomes_project 3 176363422 176370100 - St6galnac5 protein_coding processed_transcript MGP_NODShiLtJ_T0014066.1 MGP_NODShiLtJ_G0012174.1 mouse_genomes_project 3 109435165 109435566 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013822.1 MGP_NODShiLtJ_G0011930.1 mouse_genomes_project 3 17708492 17708997 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060625.1 MGP_NODShiLtJ_G0027053.1 mouse_genomes_project 3 66136821 66232744 + MGP_NODShiLtJ_P0060625 Med12l protein_coding protein_coding MGP_NODShiLtJ_T0060626.1 MGP_NODShiLtJ_G0027053.1 mouse_genomes_project 3 66137474 66476899 + MGP_NODShiLtJ_P0060626 Med12l protein_coding protein_coding MGP_NODShiLtJ_T0060627.1 MGP_NODShiLtJ_G0027053.1 mouse_genomes_project 3 66137971 66476627 + MGP_NODShiLtJ_P0060627 Med12l protein_coding protein_coding MGP_NODShiLtJ_T0060628.1 MGP_NODShiLtJ_G0027053.1 mouse_genomes_project 3 66137971 66476627 + MGP_NODShiLtJ_P0060628 Med12l protein_coding protein_coding MGP_NODShiLtJ_T0060629.1 MGP_NODShiLtJ_G0027053.1 mouse_genomes_project 3 66137971 66231644 + MGP_NODShiLtJ_P0060629 Med12l protein_coding protein_coding MGP_NODShiLtJ_T0060649.1 MGP_NODShiLtJ_G0027053.1 mouse_genomes_project 3 66418887 66474119 + MGP_NODShiLtJ_P0060649 Med12l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001147.1 MGP_NODShiLtJ_G0001070.1 mouse_genomes_project 3 53604358 53604467 + TEC TEC MGP_NODShiLtJ_T0009372.1 MGP_NODShiLtJ_G0007505.1 mouse_genomes_project 3 167104161 167116080 + Gm43742 macro_lncRNA macro_lncRNA MGP_NODShiLtJ_T0013973.1 MGP_NODShiLtJ_G0012081.1 mouse_genomes_project 3 74876166 74876907 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098375.1 MGP_NODShiLtJ_G0036780.1 mouse_genomes_project 3 176701501 176703647 - 1700012D16Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0060284.1 MGP_NODShiLtJ_G0026988.1 mouse_genomes_project 3 41510813 41547242 - MGP_NODShiLtJ_P0060284 protein_coding protein_coding MGP_NODShiLtJ_T0060285.1 MGP_NODShiLtJ_G0026988.1 mouse_genomes_project 3 41511206 41545491 - MGP_NODShiLtJ_P0060285 protein_coding protein_coding MGP_NODShiLtJ_T0060286.1 MGP_NODShiLtJ_G0026988.1 mouse_genomes_project 3 41513636 41517112 - MGP_NODShiLtJ_P0060286 protein_coding protein_coding MGP_NODShiLtJ_T0060287.1 MGP_NODShiLtJ_G0026988.1 mouse_genomes_project 3 41545650 41547213 - protein_coding processed_transcript MGP_NODShiLtJ_T0010407.1 MGP_NODShiLtJ_G0008540.1 mouse_genomes_project 3 38054020 38054112 + Gm25442 miRNA miRNA MGP_NODShiLtJ_T0101860.1 MGP_NODShiLtJ_G0040028.1 mouse_genomes_project 3 72206232 72227835 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0061317.1 MGP_NODShiLtJ_G0027217.1 mouse_genomes_project 3 101401204 101418974 + MGP_NODShiLtJ_P0061317 Ubqln4 protein_coding protein_coding MGP_NODShiLtJ_T0061318.1 MGP_NODShiLtJ_G0027217.1 mouse_genomes_project 3 101401210 101412192 + Ubqln4 protein_coding retained_intron MGP_NODShiLtJ_T0061319.1 MGP_NODShiLtJ_G0027217.1 mouse_genomes_project 3 101401242 101405468 + MGP_NODShiLtJ_P0061319 Ubqln4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061320.1 MGP_NODShiLtJ_G0027217.1 mouse_genomes_project 3 101405332 101413147 + Ubqln4 protein_coding processed_transcript MGP_NODShiLtJ_T0061321.1 MGP_NODShiLtJ_G0027217.1 mouse_genomes_project 3 101412539 101413907 + Ubqln4 protein_coding retained_intron MGP_NODShiLtJ_T0060929.1 MGP_NODShiLtJ_G0027129.1 mouse_genomes_project 3 91306117 91334839 - MGP_NODShiLtJ_P0060929 Etfdh protein_coding protein_coding MGP_NODShiLtJ_T0060930.1 MGP_NODShiLtJ_G0027129.1 mouse_genomes_project 3 91306132 91334673 - MGP_NODShiLtJ_P0060930 Etfdh protein_coding protein_coding MGP_NODShiLtJ_T0060931.1 MGP_NODShiLtJ_G0027129.1 mouse_genomes_project 3 91319915 91334659 - Etfdh protein_coding retained_intron MGP_NODShiLtJ_T0060932.1 MGP_NODShiLtJ_G0027129.1 mouse_genomes_project 3 91321512 91334839 - Etfdh protein_coding retained_intron MGP_NODShiLtJ_T0060933.1 MGP_NODShiLtJ_G0027129.1 mouse_genomes_project 3 91323691 91334694 - Etfdh protein_coding retained_intron MGP_NODShiLtJ_T0060934.1 MGP_NODShiLtJ_G0027129.1 mouse_genomes_project 3 91334224 91335476 - Etfdh protein_coding retained_intron MGP_NODShiLtJ_T0060935.1 MGP_NODShiLtJ_G0027129.1 mouse_genomes_project 3 91334242 91334715 - Etfdh protein_coding processed_transcript MGP_NODShiLtJ_T0001202.1 MGP_NODShiLtJ_G0001123.1 mouse_genomes_project 3 68019824 68023189 + TEC TEC MGP_NODShiLtJ_T0013970.1 MGP_NODShiLtJ_G0012078.1 mouse_genomes_project 3 74379717 74379976 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060044.1 MGP_NODShiLtJ_G0026947.1 mouse_genomes_project 3 33588873 33710657 - MGP_NODShiLtJ_P0060044 Slc7a14 protein_coding protein_coding MGP_NODShiLtJ_T0060045.1 MGP_NODShiLtJ_G0026947.1 mouse_genomes_project 3 33615957 33653302 - MGP_NODShiLtJ_P0060045 Slc7a14 protein_coding protein_coding MGP_NODShiLtJ_T0100441.1 MGP_NODShiLtJ_G0038835.1 mouse_genomes_project 3 36551087 36551219 - Gm23175 snoRNA snoRNA MGP_NODShiLtJ_T0007517.1 MGP_NODShiLtJ_G0006150.1 mouse_genomes_project 3 90964261 90965262 + 6430573P05Rik lincRNA lincRNA MGP_NODShiLtJ_T0007518.1 MGP_NODShiLtJ_G0006150.1 mouse_genomes_project 3 90964480 90966933 + 6430573P05Rik lincRNA lincRNA MGP_NODShiLtJ_T0007519.1 MGP_NODShiLtJ_G0006150.1 mouse_genomes_project 3 90964816 90965893 + 6430573P05Rik lincRNA lincRNA MGP_NODShiLtJ_T0001203.1 MGP_NODShiLtJ_G0001124.1 mouse_genomes_project 3 71394199 71394685 + TEC TEC MGP_NODShiLtJ_T0013837.1 MGP_NODShiLtJ_G0011945.1 mouse_genomes_project 3 21714052 21715646 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001184.1 MGP_NODShiLtJ_G0001105.1 mouse_genomes_project 3 59538273 59539097 + TEC TEC MGP_NODShiLtJ_T0010400.1 MGP_NODShiLtJ_G0008533.1 mouse_genomes_project 3 30478921 30478997 + Mir466q miRNA miRNA MGP_NODShiLtJ_T0001214.1 MGP_NODShiLtJ_G0001135.1 mouse_genomes_project 3 85673178 85675398 - TEC TEC MGP_NODShiLtJ_T0013992.1 MGP_NODShiLtJ_G0012100.1 mouse_genomes_project 3 80897639 80902082 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099161.1 MGP_NODShiLtJ_G0037555.1 mouse_genomes_project 3 44223667 44223825 + Gm22043 snRNA snRNA MGP_NODShiLtJ_T0100485.1 MGP_NODShiLtJ_G0038879.1 mouse_genomes_project 3 132343616 132343748 - Gm23750 snoRNA snoRNA MGP_NODShiLtJ_T0014224.1 MGP_NODShiLtJ_G0012332.1 mouse_genomes_project 3 161953192 161953742 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004259.1 MGP_NODShiLtJ_G0003730.1 mouse_genomes_project 3 114767966 114773746 - Spag17os antisense antisense MGP_NODShiLtJ_T0004260.1 MGP_NODShiLtJ_G0003730.1 mouse_genomes_project 3 114769941 114773746 - Spag17os antisense antisense MGP_NODShiLtJ_T0013875.1 MGP_NODShiLtJ_G0011983.1 mouse_genomes_project 3 40045223 40046328 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098325.1 MGP_NODShiLtJ_G0036730.1 mouse_genomes_project 3 115204255 115206976 + Gm42868 sense_intronic sense_intronic MGP_NODShiLtJ_T0061369.1 MGP_NODShiLtJ_G0027222.1 mouse_genomes_project 3 101581808 101607217 + MGP_NODShiLtJ_P0061369 Rit1 protein_coding protein_coding MGP_NODShiLtJ_T0061370.1 MGP_NODShiLtJ_G0027222.1 mouse_genomes_project 3 101581822 101603235 + MGP_NODShiLtJ_P0061370 Rit1 protein_coding protein_coding MGP_NODShiLtJ_T0061371.1 MGP_NODShiLtJ_G0027222.1 mouse_genomes_project 3 101581827 101582954 + Rit1 protein_coding retained_intron MGP_NODShiLtJ_T0061372.1 MGP_NODShiLtJ_G0027222.1 mouse_genomes_project 3 101581840 101610812 + MGP_NODShiLtJ_P0061372 Rit1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061373.1 MGP_NODShiLtJ_G0027222.1 mouse_genomes_project 3 101581844 101610820 + Rit1 protein_coding retained_intron MGP_NODShiLtJ_T0061374.1 MGP_NODShiLtJ_G0027222.1 mouse_genomes_project 3 101581845 101607423 + MGP_NODShiLtJ_P0061374 Rit1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061375.1 MGP_NODShiLtJ_G0027222.1 mouse_genomes_project 3 101581857 101603185 + Rit1 protein_coding retained_intron MGP_NODShiLtJ_T0001325.1 MGP_NODShiLtJ_G0001245.1 mouse_genomes_project 3 153060821 153064036 + TEC TEC MGP_NODShiLtJ_T0013790.1 MGP_NODShiLtJ_G0011898.1 mouse_genomes_project 3 7394098 7394431 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014208.1 MGP_NODShiLtJ_G0012316.1 mouse_genomes_project 3 156705430 156706063 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007691.1 MGP_NODShiLtJ_G0006287.1 mouse_genomes_project 3 167863519 167865700 + Gm17501 lincRNA lincRNA MGP_NODShiLtJ_T0007692.1 MGP_NODShiLtJ_G0006287.1 mouse_genomes_project 3 167865320 167907068 + Gm17501 lincRNA lincRNA MGP_NODShiLtJ_T0013817.1 MGP_NODShiLtJ_G0011925.1 mouse_genomes_project 3 15895145 15896235 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099215.1 MGP_NODShiLtJ_G0037609.1 mouse_genomes_project 3 125605673 125605779 + Gm25681 snRNA snRNA MGP_NODShiLtJ_T0062486.1 MGP_NODShiLtJ_G0027500.1 mouse_genomes_project 3 117629907 117667141 + MGP_NODShiLtJ_P0062486 Tspan2 protein_coding protein_coding MGP_NODShiLtJ_T0062487.1 MGP_NODShiLtJ_G0027500.1 mouse_genomes_project 3 117630166 117664109 + MGP_NODShiLtJ_P0062487 Tspan2 protein_coding protein_coding MGP_NODShiLtJ_T0062488.1 MGP_NODShiLtJ_G0027500.1 mouse_genomes_project 3 117654217 117712728 + MGP_NODShiLtJ_P0062488 Tspan2 protein_coding protein_coding MGP_NODShiLtJ_T0060239.1 MGP_NODShiLtJ_G0026979.1 mouse_genomes_project 3 39987672 40040022 + MGP_NODShiLtJ_P0060239 Adad1 protein_coding protein_coding MGP_NODShiLtJ_T0060240.1 MGP_NODShiLtJ_G0026979.1 mouse_genomes_project 3 39987776 40039020 + MGP_NODShiLtJ_P0060240 Adad1 protein_coding protein_coding MGP_NODShiLtJ_T0060241.1 MGP_NODShiLtJ_G0026979.1 mouse_genomes_project 3 39987823 39991531 + Adad1 protein_coding retained_intron MGP_NODShiLtJ_T0060242.1 MGP_NODShiLtJ_G0026979.1 mouse_genomes_project 3 40015552 40022348 + Adad1 protein_coding retained_intron MGP_NODShiLtJ_T0060243.1 MGP_NODShiLtJ_G0026979.1 mouse_genomes_project 3 40015689 40052623 + MGP_NODShiLtJ_P0060243 Adad1 protein_coding protein_coding MGP_NODShiLtJ_T0060580.1 MGP_NODShiLtJ_G0027041.1 mouse_genomes_project 3 64357247 64480704 - MGP_NODShiLtJ_P0060580 Wwtr1 protein_coding protein_coding MGP_NODShiLtJ_T0060581.1 MGP_NODShiLtJ_G0027041.1 mouse_genomes_project 3 64357380 64480786 - MGP_NODShiLtJ_P0060581 Wwtr1 protein_coding protein_coding MGP_NODShiLtJ_T0001126.1 MGP_NODShiLtJ_G0001049.1 mouse_genomes_project 3 40170857 40171335 + TEC TEC MGP_NODShiLtJ_T0014085.1 MGP_NODShiLtJ_G0012193.1 mouse_genomes_project 3 114084246 114085076 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098365.1 MGP_NODShiLtJ_G0036770.1 mouse_genomes_project 3 120970222 120971656 - Gm43328 sense_intronic sense_intronic MGP_NODShiLtJ_T0010465.1 MGP_NODShiLtJ_G0008598.1 mouse_genomes_project 3 176718702 176718814 + Gm27405 miRNA miRNA MGP_NODShiLtJ_T0099186.1 MGP_NODShiLtJ_G0037580.1 mouse_genomes_project 3 98362443 98362550 - Gm26204 snRNA snRNA MGP_NODShiLtJ_T0010412.1 MGP_NODShiLtJ_G0008545.1 mouse_genomes_project 3 51991687 51991802 - Mir6379 miRNA miRNA MGP_NODShiLtJ_T0013954.1 MGP_NODShiLtJ_G0012062.1 mouse_genomes_project 3 68333352 68333731 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001284.1 MGP_NODShiLtJ_G0001205.1 mouse_genomes_project 3 143365145 143366092 - TEC TEC MGP_NODShiLtJ_T0101341.1 MGP_NODShiLtJ_G0039579.1 mouse_genomes_project 3 166929469 166977717 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101342.1 MGP_NODShiLtJ_G0039579.1 mouse_genomes_project 3 166946118 166983983 - transcribed_unprocessed_pseudogene retained_intron MGP_NODShiLtJ_T0014031.1 MGP_NODShiLtJ_G0012139.1 mouse_genomes_project 3 99472534 99473221 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001248.1 MGP_NODShiLtJ_G0001169.1 mouse_genomes_project 3 112511725 112514788 + TEC TEC MGP_NODShiLtJ_T0097803.1 MGP_NODShiLtJ_G0036215.1 mouse_genomes_project 3 102346321 102347592 + pseudogene pseudogene MGP_NODShiLtJ_T0007599.1 MGP_NODShiLtJ_G0006211.1 mouse_genomes_project 3 123736663 123758976 + Gm12524 lincRNA lincRNA MGP_NODShiLtJ_T0063170.1 MGP_NODShiLtJ_G0027649.1 mouse_genomes_project 3 140417010 140477186 - MGP_NODShiLtJ_P0063170 Abcd3 protein_coding protein_coding MGP_NODShiLtJ_T0063171.1 MGP_NODShiLtJ_G0027649.1 mouse_genomes_project 3 140417143 140477322 - MGP_NODShiLtJ_P0063171 Abcd3 protein_coding protein_coding MGP_NODShiLtJ_T0063172.1 MGP_NODShiLtJ_G0027649.1 mouse_genomes_project 3 140417992 140477186 - MGP_NODShiLtJ_P0063172 Abcd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063173.1 MGP_NODShiLtJ_G0027649.1 mouse_genomes_project 3 140425396 140427863 - Abcd3 protein_coding retained_intron MGP_NODShiLtJ_T0063174.1 MGP_NODShiLtJ_G0027649.1 mouse_genomes_project 3 140446122 140476929 - Abcd3 protein_coding processed_transcript MGP_NODShiLtJ_T0063175.1 MGP_NODShiLtJ_G0027649.1 mouse_genomes_project 3 140457462 140477217 - Abcd3 protein_coding retained_intron MGP_NODShiLtJ_T0001187.1 MGP_NODShiLtJ_G0001108.1 mouse_genomes_project 3 62018574 62020706 + TEC TEC MGP_NODShiLtJ_T0099172.1 MGP_NODShiLtJ_G0037566.1 mouse_genomes_project 3 65307073 65307180 - Gm26166 snRNA snRNA MGP_NODShiLtJ_T0014125.1 MGP_NODShiLtJ_G0012233.1 mouse_genomes_project 3 126054311 126054648 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014130.1 MGP_NODShiLtJ_G0012238.1 mouse_genomes_project 3 128138554 128138948 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061832.1 MGP_NODShiLtJ_G0027335.1 mouse_genomes_project 3 106376268 106378457 - MGP_NODShiLtJ_P0061832 Lce1h protein_coding protein_coding MGP_NODShiLtJ_T0014246.1 MGP_NODShiLtJ_G0012354.1 mouse_genomes_project 3 175258104 175258811 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063526.1 MGP_NODShiLtJ_G0027712.1 mouse_genomes_project 3 153628420 153698120 + MGP_NODShiLtJ_P0063526 Ppa2 protein_coding protein_coding MGP_NODShiLtJ_T0063527.1 MGP_NODShiLtJ_G0027712.1 mouse_genomes_project 3 153628432 153698277 + MGP_NODShiLtJ_P0063527 Ppa2 protein_coding protein_coding MGP_NODShiLtJ_T0063528.1 MGP_NODShiLtJ_G0027712.1 mouse_genomes_project 3 153628792 153690489 + Ppa2 protein_coding processed_transcript MGP_NODShiLtJ_T0063529.1 MGP_NODShiLtJ_G0027712.1 mouse_genomes_project 3 153639783 153644883 + Ppa2 protein_coding retained_intron MGP_NODShiLtJ_T0063530.1 MGP_NODShiLtJ_G0027712.1 mouse_genomes_project 3 153658196 153687971 + Ppa2 protein_coding processed_transcript MGP_NODShiLtJ_T0063531.1 MGP_NODShiLtJ_G0027712.1 mouse_genomes_project 3 153658369 153698124 + Ppa2 protein_coding retained_intron MGP_NODShiLtJ_T0063532.1 MGP_NODShiLtJ_G0027712.1 mouse_genomes_project 3 153667342 153698109 + MGP_NODShiLtJ_P0063532 Ppa2 protein_coding protein_coding MGP_NODShiLtJ_T0063533.1 MGP_NODShiLtJ_G0027712.1 mouse_genomes_project 3 153692455 153694489 + Ppa2 protein_coding retained_intron MGP_NODShiLtJ_T0063461.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150794112 150798630 - MGP_NODShiLtJ_P0063461 Rpl34 protein_coding protein_coding MGP_NODShiLtJ_T0063462.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150794115 150794688 - Rpl34 protein_coding retained_intron MGP_NODShiLtJ_T0063463.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150794120 150798691 - MGP_NODShiLtJ_P0063463 Rpl34 protein_coding protein_coding MGP_NODShiLtJ_T0063464.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150794145 150798635 - Rpl34 protein_coding retained_intron MGP_NODShiLtJ_T0063465.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150794156 150796567 - MGP_NODShiLtJ_P0063465 Rpl34 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063466.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150794157 150798614 - MGP_NODShiLtJ_P0063466 Rpl34 protein_coding protein_coding MGP_NODShiLtJ_T0063467.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150795706 150796576 - MGP_NODShiLtJ_P0063467 Rpl34 protein_coding protein_coding MGP_NODShiLtJ_T0063468.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150796838 150798640 - Rpl34 protein_coding retained_intron MGP_NODShiLtJ_T0063469.1 MGP_NODShiLtJ_G0027698.1 mouse_genomes_project 3 150797109 150798639 - MGP_NODShiLtJ_P0063469 Rpl34 protein_coding protein_coding MGP_NODShiLtJ_T0101885.1 MGP_NODShiLtJ_G0040053.1 mouse_genomes_project 3 108155824 108156019 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004174.1 MGP_NODShiLtJ_G0003667.1 mouse_genomes_project 3 39976164 39984158 - Gm12531 antisense antisense MGP_NODShiLtJ_T0004175.1 MGP_NODShiLtJ_G0003667.1 mouse_genomes_project 3 39976166 39984153 - Gm12531 antisense antisense MGP_NODShiLtJ_T0014109.1 MGP_NODShiLtJ_G0012217.1 mouse_genomes_project 3 121227659 121235238 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061003.1 MGP_NODShiLtJ_G0027148.1 mouse_genomes_project 3 95282509 95292228 - MGP_NODShiLtJ_P0061003 Fgb protein_coding protein_coding MGP_NODShiLtJ_T0014023.1 MGP_NODShiLtJ_G0012131.1 mouse_genomes_project 3 96900776 96901972 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007638.1 MGP_NODShiLtJ_G0006241.1 mouse_genomes_project 3 150835976 150837770 + Gm43522 lincRNA lincRNA MGP_NODShiLtJ_T0007639.1 MGP_NODShiLtJ_G0006241.1 mouse_genomes_project 3 150836905 150838829 + Gm43522 lincRNA lincRNA MGP_NODShiLtJ_T0061281.1 MGP_NODShiLtJ_G0027211.1 mouse_genomes_project 3 101247814 101262426 - MGP_NODShiLtJ_P0061281 Slc25a44 protein_coding protein_coding MGP_NODShiLtJ_T0061282.1 MGP_NODShiLtJ_G0027211.1 mouse_genomes_project 3 101247814 101262425 - MGP_NODShiLtJ_P0061282 Slc25a44 protein_coding protein_coding MGP_NODShiLtJ_T0061283.1 MGP_NODShiLtJ_G0027211.1 mouse_genomes_project 3 101247815 101262457 - MGP_NODShiLtJ_P0061283 Slc25a44 protein_coding protein_coding MGP_NODShiLtJ_T0061284.1 MGP_NODShiLtJ_G0027211.1 mouse_genomes_project 3 101247815 101262430 - MGP_NODShiLtJ_P0061284 Slc25a44 protein_coding protein_coding MGP_NODShiLtJ_T0014108.1 MGP_NODShiLtJ_G0012216.1 mouse_genomes_project 3 120090822 120091076 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013841.1 MGP_NODShiLtJ_G0011949.1 mouse_genomes_project 3 23355794 23362365 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011423.1 MGP_NODShiLtJ_G0009556.1 mouse_genomes_project 3 26238073 26238339 + Gm24062 misc_RNA misc_RNA MGP_NODShiLtJ_T0062300.1 MGP_NODShiLtJ_G0027448.1 mouse_genomes_project 3 110953985 110970602 - MGP_NODShiLtJ_P0062300 Polr3c protein_coding protein_coding MGP_NODShiLtJ_T0062301.1 MGP_NODShiLtJ_G0027448.1 mouse_genomes_project 3 110954018 110970415 - MGP_NODShiLtJ_P0062301 Polr3c protein_coding protein_coding MGP_NODShiLtJ_T0062302.1 MGP_NODShiLtJ_G0027448.1 mouse_genomes_project 3 110958947 110966222 - MGP_NODShiLtJ_P0062302 Polr3c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062303.1 MGP_NODShiLtJ_G0027448.1 mouse_genomes_project 3 110961124 110970450 - Polr3c protein_coding retained_intron MGP_NODShiLtJ_T0062304.1 MGP_NODShiLtJ_G0027448.1 mouse_genomes_project 3 110965822 110970428 - MGP_NODShiLtJ_P0062304 Polr3c protein_coding protein_coding MGP_NODShiLtJ_T0062305.1 MGP_NODShiLtJ_G0027448.1 mouse_genomes_project 3 110965825 110970449 - MGP_NODShiLtJ_P0062305 Polr3c protein_coding protein_coding MGP_NODShiLtJ_T0063895.1 MGP_NODShiLtJ_G0027788.1 mouse_genomes_project 3 168780939 168795183 - MGP_NODShiLtJ_P0063895 Spata1 protein_coding protein_coding MGP_NODShiLtJ_T0063896.1 MGP_NODShiLtJ_G0027788.1 mouse_genomes_project 3 168780945 168825497 - MGP_NODShiLtJ_P0063896 Spata1 protein_coding protein_coding MGP_NODShiLtJ_T0063897.1 MGP_NODShiLtJ_G0027788.1 mouse_genomes_project 3 168780946 168831401 - MGP_NODShiLtJ_P0063897 Spata1 protein_coding protein_coding MGP_NODShiLtJ_T0063898.1 MGP_NODShiLtJ_G0027788.1 mouse_genomes_project 3 168791392 168801662 - MGP_NODShiLtJ_P0063898 Spata1 protein_coding protein_coding MGP_NODShiLtJ_T0063899.1 MGP_NODShiLtJ_G0027788.1 mouse_genomes_project 3 168795069 168814016 - Spata1 protein_coding processed_transcript MGP_NODShiLtJ_T0063900.1 MGP_NODShiLtJ_G0027788.1 mouse_genomes_project 3 168800749 168831357 - Spata1 protein_coding processed_transcript MGP_NODShiLtJ_T0063901.1 MGP_NODShiLtJ_G0027788.1 mouse_genomes_project 3 168815905 168826767 - MGP_NODShiLtJ_P0063901 Spata1 protein_coding protein_coding MGP_NODShiLtJ_T0004315.1 MGP_NODShiLtJ_G0003764.1 mouse_genomes_project 3 149493934 149498607 - Gm35986 antisense antisense MGP_NODShiLtJ_T0004316.1 MGP_NODShiLtJ_G0003764.1 mouse_genomes_project 3 149494099 149498886 - Gm35986 antisense antisense MGP_NODShiLtJ_T0101854.1 MGP_NODShiLtJ_G0040022.1 mouse_genomes_project 3 24172258 24174773 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059839.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20721752 20759558 + MGP_NODShiLtJ_P0059839 Cp protein_coding protein_coding MGP_NODShiLtJ_T0059840.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20721752 20777108 + MGP_NODShiLtJ_P0059840 Cp protein_coding protein_coding MGP_NODShiLtJ_T0059841.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20721759 20735801 + Cp protein_coding retained_intron MGP_NODShiLtJ_T0059842.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20721767 20778709 + MGP_NODShiLtJ_P0059842 Cp protein_coding protein_coding MGP_NODShiLtJ_T0059843.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20721809 20777108 + MGP_NODShiLtJ_P0059843 Cp protein_coding protein_coding MGP_NODShiLtJ_T0059844.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20721917 20735469 + Cp protein_coding retained_intron MGP_NODShiLtJ_T0059845.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20721982 20758945 + MGP_NODShiLtJ_P0059845 Cp protein_coding protein_coding MGP_NODShiLtJ_T0059846.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20736305 20755501 + Cp protein_coding retained_intron MGP_NODShiLtJ_T0059847.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20737348 20741476 + Cp protein_coding retained_intron MGP_NODShiLtJ_T0059848.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20741182 20747208 + Cp protein_coding retained_intron MGP_NODShiLtJ_T0059849.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20747094 20753831 + MGP_NODShiLtJ_P0059849 Cp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059850.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20747894 20749922 + Cp protein_coding retained_intron MGP_NODShiLtJ_T0059851.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20748469 20752338 + MGP_NODShiLtJ_P0059851 Cp protein_coding protein_coding MGP_NODShiLtJ_T0059852.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20752046 20759002 + MGP_NODShiLtJ_P0059852 Cp protein_coding protein_coding MGP_NODShiLtJ_T0059853.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20753979 20756063 + Cp protein_coding retained_intron MGP_NODShiLtJ_T0059854.1 MGP_NODShiLtJ_G0026911.1 mouse_genomes_project 3 20755587 20775857 + MGP_NODShiLtJ_P0059854 Cp protein_coding protein_coding MGP_NODShiLtJ_T0061497.1 MGP_NODShiLtJ_G0027241.1 mouse_genomes_project 3 102235553 102236781 + Krtcap2 protein_coding retained_intron MGP_NODShiLtJ_T0061498.1 MGP_NODShiLtJ_G0027241.1 mouse_genomes_project 3 102235925 102239319 + MGP_NODShiLtJ_P0061498 Krtcap2 protein_coding protein_coding MGP_NODShiLtJ_T0061499.1 MGP_NODShiLtJ_G0027241.1 mouse_genomes_project 3 102236021 102239297 + MGP_NODShiLtJ_P0061499 Krtcap2 protein_coding protein_coding MGP_NODShiLtJ_T0061500.1 MGP_NODShiLtJ_G0027241.1 mouse_genomes_project 3 102238450 102239310 + Krtcap2 protein_coding retained_intron MGP_NODShiLtJ_T0061933.1 MGP_NODShiLtJ_G0027374.1 mouse_genomes_project 3 108607212 108632792 + MGP_NODShiLtJ_P0061933 protein_coding protein_coding MGP_NODShiLtJ_T0061934.1 MGP_NODShiLtJ_G0027374.1 mouse_genomes_project 3 108607303 108632799 + MGP_NODShiLtJ_P0061934 protein_coding protein_coding MGP_NODShiLtJ_T0061936.1 MGP_NODShiLtJ_G0027374.1 mouse_genomes_project 3 108621286 108635108 + MGP_NODShiLtJ_P0061936 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061937.1 MGP_NODShiLtJ_G0027374.1 mouse_genomes_project 3 108631451 108634599 + protein_coding retained_intron MGP_NODShiLtJ_T0061938.1 MGP_NODShiLtJ_G0027374.1 mouse_genomes_project 3 108631451 108634998 + MGP_NODShiLtJ_P0061938 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013859.1 MGP_NODShiLtJ_G0011967.1 mouse_genomes_project 3 36246870 36247228 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014137.1 MGP_NODShiLtJ_G0012245.1 mouse_genomes_project 3 129930873 129931704 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010444.1 MGP_NODShiLtJ_G0008577.1 mouse_genomes_project 3 135284854 135284919 + Gm22408 miRNA miRNA MGP_NODShiLtJ_T0059785.1 MGP_NODShiLtJ_G0026890.1 mouse_genomes_project 3 14495223 14500215 - MGP_NODShiLtJ_P0059785 1810022K09Rik protein_coding protein_coding MGP_NODShiLtJ_T0059786.1 MGP_NODShiLtJ_G0026890.1 mouse_genomes_project 3 14495228 14500151 - MGP_NODShiLtJ_P0059786 1810022K09Rik protein_coding protein_coding MGP_NODShiLtJ_T0059787.1 MGP_NODShiLtJ_G0026890.1 mouse_genomes_project 3 14495228 14500191 - MGP_NODShiLtJ_P0059787 1810022K09Rik protein_coding protein_coding MGP_NODShiLtJ_T0059788.1 MGP_NODShiLtJ_G0026890.1 mouse_genomes_project 3 14495232 14500184 - MGP_NODShiLtJ_P0059788 1810022K09Rik protein_coding protein_coding MGP_NODShiLtJ_T0059789.1 MGP_NODShiLtJ_G0026890.1 mouse_genomes_project 3 14498113 14500173 - 1810022K09Rik protein_coding retained_intron MGP_NODShiLtJ_T0061546.1 MGP_NODShiLtJ_G0027251.1 mouse_genomes_project 3 102398122 102399929 - MGP_NODShiLtJ_P0061546 Lenep protein_coding protein_coding MGP_NODShiLtJ_T0001198.1 MGP_NODShiLtJ_G0001119.1 mouse_genomes_project 3 65798767 65799877 + TEC TEC MGP_NODShiLtJ_T0013944.1 MGP_NODShiLtJ_G0012052.1 mouse_genomes_project 3 65766895 65767860 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014124.1 MGP_NODShiLtJ_G0012232.1 mouse_genomes_project 3 125652022 125652506 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013893.1 MGP_NODShiLtJ_G0012001.1 mouse_genomes_project 3 46845089 46845546 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060204.1 MGP_NODShiLtJ_G0026976.1 mouse_genomes_project 3 39415858 39461714 - MGP_NODShiLtJ_P0060204 Bbs7 protein_coding protein_coding MGP_NODShiLtJ_T0060205.1 MGP_NODShiLtJ_G0026976.1 mouse_genomes_project 3 39415858 39461802 - MGP_NODShiLtJ_P0060205 Bbs7 protein_coding protein_coding MGP_NODShiLtJ_T0060206.1 MGP_NODShiLtJ_G0026976.1 mouse_genomes_project 3 39417589 39461610 - MGP_NODShiLtJ_P0060206 Bbs7 protein_coding protein_coding MGP_NODShiLtJ_T0060207.1 MGP_NODShiLtJ_G0026976.1 mouse_genomes_project 3 39418500 39420631 - Bbs7 protein_coding retained_intron MGP_NODShiLtJ_T0060208.1 MGP_NODShiLtJ_G0026976.1 mouse_genomes_project 3 39457859 39461714 - Bbs7 protein_coding retained_intron MGP_NODShiLtJ_T0060209.1 MGP_NODShiLtJ_G0026976.1 mouse_genomes_project 3 39458686 39461714 - MGP_NODShiLtJ_P0060209 Bbs7 protein_coding protein_coding MGP_NODShiLtJ_T0014038.1 MGP_NODShiLtJ_G0012146.1 mouse_genomes_project 3 101425480 101426152 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098195.1 MGP_NODShiLtJ_G0036607.1 mouse_genomes_project 3 71017321 71017463 + Gm22433 scaRNA scaRNA MGP_NODShiLtJ_T0007575.1 MGP_NODShiLtJ_G0006192.1 mouse_genomes_project 3 115196474 115231683 + Gm12474 lincRNA lincRNA MGP_NODShiLtJ_T0007681.1 MGP_NODShiLtJ_G0006279.1 mouse_genomes_project 3 165611403 165655994 - Gm6260 lincRNA lincRNA MGP_NODShiLtJ_T0007682.1 MGP_NODShiLtJ_G0006279.1 mouse_genomes_project 3 165635268 165656061 - Gm6260 lincRNA lincRNA MGP_NODShiLtJ_T0061033.1 MGP_NODShiLtJ_G0027156.1 mouse_genomes_project 3 96508834 96509862 + MGP_NODShiLtJ_P0061033 Gm6525 protein_coding protein_coding MGP_NODShiLtJ_T0014213.1 MGP_NODShiLtJ_G0012321.1 mouse_genomes_project 3 158588145 158588869 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099204.1 MGP_NODShiLtJ_G0037598.1 mouse_genomes_project 3 110529035 110529200 - Rnu1b1 snRNA snRNA MGP_NODShiLtJ_T0010403.1 MGP_NODShiLtJ_G0008536.1 mouse_genomes_project 3 33405720 33405783 + Mir7008 miRNA miRNA MGP_NODShiLtJ_T0059808.1 MGP_NODShiLtJ_G0026900.1 mouse_genomes_project 3 18435395 18435945 + MGP_NODShiLtJ_P0059808 Cypt12 protein_coding protein_coding MGP_NODShiLtJ_T0063616.1 MGP_NODShiLtJ_G0027725.1 mouse_genomes_project 3 156702663 156705958 - MGP_NODShiLtJ_P0063616 Scoc protein_coding protein_coding MGP_NODShiLtJ_T0004152.1 MGP_NODShiLtJ_G0003654.1 mouse_genomes_project 3 30775246 30862186 - antisense antisense MGP_NODShiLtJ_T0004153.1 MGP_NODShiLtJ_G0003654.1 mouse_genomes_project 3 30814791 30818240 - antisense antisense MGP_NODShiLtJ_T0101108.1 MGP_NODShiLtJ_G0039455.1 mouse_genomes_project 3 14456028 14456308 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0014255.1 MGP_NODShiLtJ_G0012363.1 mouse_genomes_project 3 180052544 180053010 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007606.1 MGP_NODShiLtJ_G0006217.1 mouse_genomes_project 3 133909253 133930666 + Gm26544 lincRNA lincRNA MGP_NODShiLtJ_T0014253.1 MGP_NODShiLtJ_G0012361.1 mouse_genomes_project 3 177610593 177610930 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013836.1 MGP_NODShiLtJ_G0011944.1 mouse_genomes_project 3 21714034 21715646 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004294.1 MGP_NODShiLtJ_G0003747.1 mouse_genomes_project 3 126023004 126026696 + C130013H08Rik antisense antisense MGP_NODShiLtJ_T0014223.1 MGP_NODShiLtJ_G0012331.1 mouse_genomes_project 3 161505331 161506971 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004176.1 MGP_NODShiLtJ_G0003668.1 mouse_genomes_project 3 40168159 40170460 + antisense antisense MGP_NODShiLtJ_T0001275.1 MGP_NODShiLtJ_G0001196.1 mouse_genomes_project 3 140421236 140423935 - TEC TEC MGP_NODShiLtJ_T0004302.1 MGP_NODShiLtJ_G0003753.1 mouse_genomes_project 3 141097009 141112131 - Gm42835 antisense antisense MGP_NODShiLtJ_T0098315.1 MGP_NODShiLtJ_G0036721.1 mouse_genomes_project 3 97981083 97999292 - Gm15535 sense_intronic sense_intronic MGP_NODShiLtJ_T0098316.1 MGP_NODShiLtJ_G0036721.1 mouse_genomes_project 3 97983252 97999201 - Gm15535 sense_intronic sense_intronic MGP_NODShiLtJ_T0062380.1 MGP_NODShiLtJ_G0027465.1 mouse_genomes_project 3 112553646 112555088 + MGP_NODShiLtJ_P0062380 Adam30 protein_coding protein_coding MGP_NODShiLtJ_T0062381.1 MGP_NODShiLtJ_G0027465.1 mouse_genomes_project 3 112553676 112557186 + MGP_NODShiLtJ_P0062381 Adam30 protein_coding protein_coding MGP_NODShiLtJ_T0060164.1 MGP_NODShiLtJ_G0026967.1 mouse_genomes_project 3 38747148 38789447 - MGP_NODShiLtJ_P0060164 Mccc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060165.1 MGP_NODShiLtJ_G0026967.1 mouse_genomes_project 3 38747672 38789516 - MGP_NODShiLtJ_P0060165 Mccc1 protein_coding protein_coding MGP_NODShiLtJ_T0060166.1 MGP_NODShiLtJ_G0026967.1 mouse_genomes_project 3 38747678 38748949 - Mccc1 protein_coding retained_intron MGP_NODShiLtJ_T0060167.1 MGP_NODShiLtJ_G0026967.1 mouse_genomes_project 3 38749566 38756958 - Mccc1 protein_coding retained_intron MGP_NODShiLtJ_T0060168.1 MGP_NODShiLtJ_G0026967.1 mouse_genomes_project 3 38761230 38784902 - Mccc1 protein_coding retained_intron MGP_NODShiLtJ_T0060169.1 MGP_NODShiLtJ_G0026967.1 mouse_genomes_project 3 38763043 38765258 - Mccc1 protein_coding retained_intron MGP_NODShiLtJ_T0060170.1 MGP_NODShiLtJ_G0026967.1 mouse_genomes_project 3 38764467 38778484 - MGP_NODShiLtJ_P0060170 Mccc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060171.1 MGP_NODShiLtJ_G0026967.1 mouse_genomes_project 3 38773639 38789479 - MGP_NODShiLtJ_P0060171 Mccc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004355.1 MGP_NODShiLtJ_G0003793.1 mouse_genomes_project 3 178236927 178239620 - Gm20389 antisense antisense MGP_NODShiLtJ_T0007451.1 MGP_NODShiLtJ_G0006102.1 mouse_genomes_project 3 41229753 41235633 - lincRNA lincRNA MGP_NODShiLtJ_T0013931.1 MGP_NODShiLtJ_G0012039.1 mouse_genomes_project 3 61235926 61237611 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001302.1 MGP_NODShiLtJ_G0001223.1 mouse_genomes_project 3 146899473 146905081 - TEC TEC MGP_NODShiLtJ_T0011419.1 MGP_NODShiLtJ_G0009552.1 mouse_genomes_project 3 7969343 7969654 + Gm22604 misc_RNA misc_RNA MGP_NODShiLtJ_T0001148.1 MGP_NODShiLtJ_G0001071.1 mouse_genomes_project 3 55071909 55072975 + TEC TEC MGP_NODShiLtJ_T0014250.1 MGP_NODShiLtJ_G0012358.1 mouse_genomes_project 3 176257894 176258061 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010448.1 MGP_NODShiLtJ_G0008581.1 mouse_genomes_project 3 141269521 141269578 - Mir7657 miRNA miRNA MGP_NODShiLtJ_T0063358.1 MGP_NODShiLtJ_G0027679.1 mouse_genomes_project 3 147354096 147485982 - MGP_NODShiLtJ_P0063358 Alpk1 protein_coding protein_coding MGP_NODShiLtJ_T0063359.1 MGP_NODShiLtJ_G0027679.1 mouse_genomes_project 3 147354096 147426433 - MGP_NODShiLtJ_P0063359 Alpk1 protein_coding protein_coding MGP_NODShiLtJ_T0063360.1 MGP_NODShiLtJ_G0027679.1 mouse_genomes_project 3 147354185 147485982 - Alpk1 protein_coding retained_intron MGP_NODShiLtJ_T0063361.1 MGP_NODShiLtJ_G0027679.1 mouse_genomes_project 3 147365848 147373311 - MGP_NODShiLtJ_P0063361 Alpk1 protein_coding protein_coding MGP_NODShiLtJ_T0063362.1 MGP_NODShiLtJ_G0027679.1 mouse_genomes_project 3 147421161 147485968 - Alpk1 protein_coding retained_intron MGP_NODShiLtJ_T0063363.1 MGP_NODShiLtJ_G0027679.1 mouse_genomes_project 3 147452321 147485945 - Alpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0059811.1 MGP_NODShiLtJ_G0026903.1 mouse_genomes_project 3 19151296 19152899 + MGP_NODShiLtJ_P0059811 protein_coding protein_coding MGP_NODShiLtJ_T0099157.1 MGP_NODShiLtJ_G0037551.1 mouse_genomes_project 3 25995948 25996055 + Gm24704 snRNA snRNA MGP_NODShiLtJ_T0004344.1 MGP_NODShiLtJ_G0003785.1 mouse_genomes_project 3 168985271 168996185 + Gm16325 antisense antisense MGP_NODShiLtJ_T0004345.1 MGP_NODShiLtJ_G0003785.1 mouse_genomes_project 3 168993078 168993982 + Gm16325 antisense antisense MGP_NODShiLtJ_T0010420.1 MGP_NODShiLtJ_G0008553.1 mouse_genomes_project 3 97881220 97881342 + Mir466k miRNA miRNA MGP_NODShiLtJ_T0062330.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111438842 111457641 + MGP_NODShiLtJ_P0062330 Acp6 protein_coding protein_coding MGP_NODShiLtJ_T0062331.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111439161 111440461 + Acp6 protein_coding retained_intron MGP_NODShiLtJ_T0062332.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111439168 111448411 + Acp6 protein_coding retained_intron MGP_NODShiLtJ_T0062333.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111439168 111447147 + Acp6 protein_coding retained_intron MGP_NODShiLtJ_T0062334.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111447477 111448553 + Acp6 protein_coding retained_intron MGP_NODShiLtJ_T0062335.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111448194 111453964 + Acp6 protein_coding retained_intron MGP_NODShiLtJ_T0062336.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111451250 111453993 + Acp6 protein_coding retained_intron MGP_NODShiLtJ_T0062337.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111452742 111457585 + Acp6 protein_coding retained_intron MGP_NODShiLtJ_T0062338.1 MGP_NODShiLtJ_G0027455.1 mouse_genomes_project 3 111454103 111458366 + Acp6 protein_coding retained_intron MGP_NODShiLtJ_T0060515.1 MGP_NODShiLtJ_G0027027.1 mouse_genomes_project 3 61349681 61366731 + MGP_NODShiLtJ_P0060515 Alg5 protein_coding protein_coding MGP_NODShiLtJ_T0060516.1 MGP_NODShiLtJ_G0027027.1 mouse_genomes_project 3 61349701 61368254 + MGP_NODShiLtJ_P0060516 Alg5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060517.1 MGP_NODShiLtJ_G0027027.1 mouse_genomes_project 3 61349709 61362408 + MGP_NODShiLtJ_P0060517 Alg5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060518.1 MGP_NODShiLtJ_G0027027.1 mouse_genomes_project 3 61349715 61355103 + Alg5 protein_coding retained_intron MGP_NODShiLtJ_T0099216.1 MGP_NODShiLtJ_G0037610.1 mouse_genomes_project 3 126367955 126368060 - Gm26076 snRNA snRNA MGP_NODShiLtJ_T0004194.1 MGP_NODShiLtJ_G0003683.1 mouse_genomes_project 3 66133469 66137146 - Gm43570 antisense antisense MGP_NODShiLtJ_T0101883.1 MGP_NODShiLtJ_G0040051.1 mouse_genomes_project 3 108036978 108037601 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059725.1 MGP_NODShiLtJ_G0026870.1 mouse_genomes_project 3 7795814 7834152 + MGP_NODShiLtJ_P0059725 Zbtb10 protein_coding protein_coding MGP_NODShiLtJ_T0013957.1 MGP_NODShiLtJ_G0012065.1 mouse_genomes_project 3 69774126 69776642 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063038.1 MGP_NODShiLtJ_G0027624.1 mouse_genomes_project 3 134044687 134220069 - MGP_NODShiLtJ_P0063038 Cdc14a protein_coding protein_coding MGP_NODShiLtJ_T0063039.1 MGP_NODShiLtJ_G0027624.1 mouse_genomes_project 3 134044687 134220023 - MGP_NODShiLtJ_P0063039 Cdc14a protein_coding protein_coding MGP_NODShiLtJ_T0063040.1 MGP_NODShiLtJ_G0027624.1 mouse_genomes_project 3 134097264 134218685 - MGP_NODShiLtJ_P0063040 Cdc14a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063041.1 MGP_NODShiLtJ_G0027624.1 mouse_genomes_project 3 134102132 134220069 - Cdc14a protein_coding retained_intron MGP_NODShiLtJ_T0063042.1 MGP_NODShiLtJ_G0027624.1 mouse_genomes_project 3 134196364 134219061 - Cdc14a protein_coding retained_intron MGP_NODShiLtJ_T0063043.1 MGP_NODShiLtJ_G0027624.1 mouse_genomes_project 3 134199479 134201588 - Cdc14a protein_coding retained_intron MGP_NODShiLtJ_T0063044.1 MGP_NODShiLtJ_G0027624.1 mouse_genomes_project 3 134200200 134219932 - Cdc14a protein_coding processed_transcript MGP_NODShiLtJ_T0060660.1 MGP_NODShiLtJ_G0027064.1 mouse_genomes_project 3 67369124 67375586 + MGP_NODShiLtJ_P0060660 Sucnr1 protein_coding protein_coding MGP_NODShiLtJ_T0060661.1 MGP_NODShiLtJ_G0027064.1 mouse_genomes_project 3 67369157 67374388 + Sucnr1 protein_coding processed_transcript MGP_NODShiLtJ_T0059705.1 MGP_NODShiLtJ_G0026865.1 mouse_genomes_project 3 5794589 5850147 - MGP_NODShiLtJ_P0059705 Il7 protein_coding protein_coding MGP_NODShiLtJ_T0059706.1 MGP_NODShiLtJ_G0026865.1 mouse_genomes_project 3 5794683 5850708 - Il7 protein_coding processed_transcript MGP_NODShiLtJ_T0014225.1 MGP_NODShiLtJ_G0012333.1 mouse_genomes_project 3 162083032 162083285 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060247.1 MGP_NODShiLtJ_G0026981.1 mouse_genomes_project 3 40252235 40256805 - MGP_NODShiLtJ_P0060247 Cetn4 protein_coding protein_coding MGP_NODShiLtJ_T0060248.1 MGP_NODShiLtJ_G0026981.1 mouse_genomes_project 3 40253099 40256805 - MGP_NODShiLtJ_P0060248 Cetn4 protein_coding protein_coding MGP_NODShiLtJ_T0060249.1 MGP_NODShiLtJ_G0026981.1 mouse_genomes_project 3 40253101 40256805 - MGP_NODShiLtJ_P0060249 Cetn4 protein_coding protein_coding MGP_NODShiLtJ_T0060250.1 MGP_NODShiLtJ_G0026981.1 mouse_genomes_project 3 40253236 40256779 - MGP_NODShiLtJ_P0060250 Cetn4 protein_coding protein_coding MGP_NODShiLtJ_T0060251.1 MGP_NODShiLtJ_G0026981.1 mouse_genomes_project 3 40253825 40257067 - MGP_NODShiLtJ_P0060251 Cetn4 protein_coding protein_coding MGP_NODShiLtJ_T0098371.1 MGP_NODShiLtJ_G0036776.1 mouse_genomes_project 3 149132407 149133886 + Gm27195 sense_intronic sense_intronic MGP_NODShiLtJ_T0001110.1 MGP_NODShiLtJ_G0001033.1 mouse_genomes_project 3 34827270 34828688 - TEC TEC MGP_NODShiLtJ_T0001228.1 MGP_NODShiLtJ_G0001149.1 mouse_genomes_project 3 101619066 101620006 - TEC TEC MGP_NODShiLtJ_T0099203.1 MGP_NODShiLtJ_G0037597.1 mouse_genomes_project 3 109899541 109899726 - Gm26361 snRNA snRNA MGP_NODShiLtJ_T0059903.1 MGP_NODShiLtJ_G0026921.1 mouse_genomes_project 3 28546820 28914421 + MGP_NODShiLtJ_P0059903 Spata16 protein_coding protein_coding MGP_NODShiLtJ_T0059904.1 MGP_NODShiLtJ_G0026921.1 mouse_genomes_project 3 28546850 28864214 + MGP_NODShiLtJ_P0059904 Spata16 protein_coding protein_coding MGP_NODShiLtJ_T0001266.1 MGP_NODShiLtJ_G0001187.1 mouse_genomes_project 3 136732605 136737983 + TEC TEC MGP_NODShiLtJ_T0014169.1 MGP_NODShiLtJ_G0012277.1 mouse_genomes_project 3 142353973 142354706 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061962.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925012 108930435 + MGP_NODShiLtJ_P0061962 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061963.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925045 108932500 + MGP_NODShiLtJ_P0061963 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061964.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925045 108927468 + MGP_NODShiLtJ_P0061964 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061965.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925046 108927252 + MGP_NODShiLtJ_P0061965 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061966.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925072 108932288 + MGP_NODShiLtJ_P0061966 Rfx5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061967.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925097 108926642 + Rfx5 protein_coding processed_transcript MGP_NODShiLtJ_T0061968.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925097 108928087 + MGP_NODShiLtJ_P0061968 Rfx5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061969.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925107 108932288 + MGP_NODShiLtJ_P0061969 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061970.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925132 108927330 + MGP_NODShiLtJ_P0061970 Rfx5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061971.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925138 108932285 + Rfx5 protein_coding retained_intron MGP_NODShiLtJ_T0061972.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925163 108932288 + MGP_NODShiLtJ_P0061972 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061973.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925321 108927734 + MGP_NODShiLtJ_P0061973 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061974.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925415 108927266 + MGP_NODShiLtJ_P0061974 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061975.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925464 108927297 + MGP_NODShiLtJ_P0061975 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061976.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925701 108930545 + MGP_NODShiLtJ_P0061976 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061977.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108925953 108932500 + MGP_NODShiLtJ_P0061977 Rfx5 protein_coding protein_coding MGP_NODShiLtJ_T0061978.1 MGP_NODShiLtJ_G0027380.1 mouse_genomes_project 3 108926409 108927741 + Rfx5 protein_coding retained_intron MGP_NODShiLtJ_T0014117.1 MGP_NODShiLtJ_G0012225.1 mouse_genomes_project 3 123519816 123520053 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063974.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175394640 175410700 - Gipc2 protein_coding processed_transcript MGP_NODShiLtJ_T0063975.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175394946 175474212 - MGP_NODShiLtJ_P0063975 Gipc2 protein_coding protein_coding MGP_NODShiLtJ_T0063976.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175394948 175409211 - Gipc2 protein_coding processed_transcript MGP_NODShiLtJ_T0063977.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175394989 175408759 - Gipc2 protein_coding processed_transcript MGP_NODShiLtJ_T0063978.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175395126 175405033 - Gipc2 protein_coding retained_intron MGP_NODShiLtJ_T0063979.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175395301 175452412 - Gipc2 protein_coding processed_transcript MGP_NODShiLtJ_T0063980.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175404052 175410514 - Gipc2 protein_coding retained_intron MGP_NODShiLtJ_T0063981.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175432484 175442357 - Gipc2 protein_coding retained_intron MGP_NODShiLtJ_T0063982.1 MGP_NODShiLtJ_G0027802.1 mouse_genomes_project 3 175435018 175473732 - Gipc2 protein_coding processed_transcript MGP_NODShiLtJ_T0062761.1 MGP_NODShiLtJ_G0027559.1 mouse_genomes_project 3 122705505 122715897 - MGP_NODShiLtJ_P0062761 Cym protein_coding protein_coding MGP_NODShiLtJ_T0013880.1 MGP_NODShiLtJ_G0011988.1 mouse_genomes_project 3 40733925 40734296 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001140.1 MGP_NODShiLtJ_G0001063.1 mouse_genomes_project 3 45069262 45073999 + TEC TEC MGP_NODShiLtJ_T0001098.1 MGP_NODShiLtJ_G0001021.1 mouse_genomes_project 3 30369783 30371521 + TEC TEC MGP_NODShiLtJ_T0007573.1 MGP_NODShiLtJ_G0006190.1 mouse_genomes_project 3 113595217 113599172 + Gm12440 lincRNA lincRNA MGP_NODShiLtJ_T0101337.1 MGP_NODShiLtJ_G0039577.1 mouse_genomes_project 3 147131694 147135394 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0011424.1 MGP_NODShiLtJ_G0009557.1 mouse_genomes_project 3 32922178 32922590 - 1600017P15Rik misc_RNA misc_RNA MGP_NODShiLtJ_T0007422.1 MGP_NODShiLtJ_G0006076.1 mouse_genomes_project 3 29093383 29096374 + 1700125G22Rik lincRNA lincRNA MGP_NODShiLtJ_T0013961.1 MGP_NODShiLtJ_G0012069.1 mouse_genomes_project 3 71746342 71746993 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060545.1 MGP_NODShiLtJ_G0027034.1 mouse_genomes_project 3 61862604 61890237 + MGP_NODShiLtJ_P0060545 Sohlh2 protein_coding protein_coding MGP_NODShiLtJ_T0100458.1 MGP_NODShiLtJ_G0038852.1 mouse_genomes_project 3 78959171 78959299 - Gm23477 snoRNA snoRNA MGP_NODShiLtJ_T0001321.1 MGP_NODShiLtJ_G0001241.1 mouse_genomes_project 3 151110634 151113184 - TEC TEC MGP_NODShiLtJ_T0013967.1 MGP_NODShiLtJ_G0012075.1 mouse_genomes_project 3 74248071 74248321 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010429.1 MGP_NODShiLtJ_G0008562.1 mouse_genomes_project 3 103150122 103150202 + Mir190b miRNA miRNA MGP_NODShiLtJ_T0007640.1 MGP_NODShiLtJ_G0006242.1 mouse_genomes_project 3 150913537 150917793 - lincRNA lincRNA MGP_NODShiLtJ_T0059729.1 MGP_NODShiLtJ_G0026872.1 mouse_genomes_project 3 8283210 8436019 - MGP_NODShiLtJ_P0059729 Pag1 protein_coding protein_coding MGP_NODShiLtJ_T0059730.1 MGP_NODShiLtJ_G0026872.1 mouse_genomes_project 3 8287612 8435970 - MGP_NODShiLtJ_P0059730 Pag1 protein_coding protein_coding MGP_NODShiLtJ_T0059731.1 MGP_NODShiLtJ_G0026872.1 mouse_genomes_project 3 8288481 8300714 - Pag1 protein_coding retained_intron MGP_NODShiLtJ_T0059732.1 MGP_NODShiLtJ_G0026872.1 mouse_genomes_project 3 8349505 8435703 - Pag1 protein_coding retained_intron MGP_NODShiLtJ_T0059733.1 MGP_NODShiLtJ_G0026872.1 mouse_genomes_project 3 8429775 8435970 - Pag1 protein_coding processed_transcript MGP_NODShiLtJ_T0014249.1 MGP_NODShiLtJ_G0012357.1 mouse_genomes_project 3 176155212 176159266 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007697.1 MGP_NODShiLtJ_G0006292.1 mouse_genomes_project 3 169792455 169796659 + Gm37041 lincRNA lincRNA MGP_NODShiLtJ_T0099238.1 MGP_NODShiLtJ_G0037632.1 mouse_genomes_project 3 181331801 181331908 + Gm22458 snRNA snRNA MGP_NODShiLtJ_T0101872.1 MGP_NODShiLtJ_G0040040.1 mouse_genomes_project 3 103033732 103037000 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013850.1 MGP_NODShiLtJ_G0011958.1 mouse_genomes_project 3 29254388 29254657 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004189.1 MGP_NODShiLtJ_G0003680.1 mouse_genomes_project 3 61716963 61755461 + 4931419H13Rik antisense antisense MGP_NODShiLtJ_T0014207.1 MGP_NODShiLtJ_G0012315.1 mouse_genomes_project 3 156705425 156705725 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007486.1 MGP_NODShiLtJ_G0006126.1 mouse_genomes_project 3 60240354 60262417 + C820005J03Rik lincRNA lincRNA MGP_NODShiLtJ_T0013796.1 MGP_NODShiLtJ_G0011904.1 mouse_genomes_project 3 8872783 8872915 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062339.1 MGP_NODShiLtJ_G0027456.1 mouse_genomes_project 3 111485941 111509645 - MGP_NODShiLtJ_P0062339 Bcl9 protein_coding protein_coding MGP_NODShiLtJ_T0062340.1 MGP_NODShiLtJ_G0027456.1 mouse_genomes_project 3 111486907 111498782 - MGP_NODShiLtJ_P0062340 Bcl9 protein_coding protein_coding MGP_NODShiLtJ_T0062341.1 MGP_NODShiLtJ_G0027456.1 mouse_genomes_project 3 111492743 111496290 - Bcl9 protein_coding processed_transcript MGP_NODShiLtJ_T0062342.1 MGP_NODShiLtJ_G0027456.1 mouse_genomes_project 3 111496764 111512156 - Bcl9 protein_coding retained_intron MGP_NODShiLtJ_T0062343.1 MGP_NODShiLtJ_G0027456.1 mouse_genomes_project 3 111498802 111512672 - Bcl9 protein_coding processed_transcript MGP_NODShiLtJ_T0062344.1 MGP_NODShiLtJ_G0027456.1 mouse_genomes_project 3 111498827 111579950 - Bcl9 protein_coding processed_transcript MGP_NODShiLtJ_T0062345.1 MGP_NODShiLtJ_G0027456.1 mouse_genomes_project 3 111498827 111509763 - Bcl9 protein_coding processed_transcript MGP_NODShiLtJ_T0062346.1 MGP_NODShiLtJ_G0027456.1 mouse_genomes_project 3 111504105 111506490 - Bcl9 protein_coding retained_intron MGP_NODShiLtJ_T0001239.1 MGP_NODShiLtJ_G0001160.1 mouse_genomes_project 3 110412320 110413934 + TEC TEC MGP_NODShiLtJ_T0013902.1 MGP_NODShiLtJ_G0012010.1 mouse_genomes_project 3 51345927 51346646 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004356.1 MGP_NODShiLtJ_G0003794.1 mouse_genomes_project 3 180820186 180848438 - antisense antisense MGP_NODShiLtJ_T0013995.1 MGP_NODShiLtJ_G0012103.1 mouse_genomes_project 3 81472120 81472625 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011436.1 MGP_NODShiLtJ_G0009569.1 mouse_genomes_project 3 110597325 110597748 - Terc misc_RNA misc_RNA MGP_NODShiLtJ_T0098314.1 MGP_NODShiLtJ_G0036720.1 mouse_genomes_project 3 91400813 91404332 - Gm26984 sense_intronic sense_intronic MGP_NODShiLtJ_T0061866.1 MGP_NODShiLtJ_G0027359.1 mouse_genomes_project 3 107504274 107510432 - MGP_NODShiLtJ_P0061866 protein_coding protein_coding MGP_NODShiLtJ_T0010453.1 MGP_NODShiLtJ_G0008586.1 mouse_genomes_project 3 147207805 147207880 + Mir367 miRNA miRNA MGP_NODShiLtJ_T0063910.1 MGP_NODShiLtJ_G0027791.1 mouse_genomes_project 3 168907812 168968451 + MGP_NODShiLtJ_P0063910 Uox protein_coding protein_coding MGP_NODShiLtJ_T0063913.1 MGP_NODShiLtJ_G0027791.1 mouse_genomes_project 3 168939109 168974787 + MGP_NODShiLtJ_P0063913 Uox protein_coding protein_coding MGP_NODShiLtJ_T0063914.1 MGP_NODShiLtJ_G0027791.1 mouse_genomes_project 3 168939180 168954442 + MGP_NODShiLtJ_P0063914 Uox protein_coding protein_coding MGP_NODShiLtJ_T0063915.1 MGP_NODShiLtJ_G0027791.1 mouse_genomes_project 3 168939197 168973127 + MGP_NODShiLtJ_P0063915 Uox protein_coding protein_coding MGP_NODShiLtJ_T0063916.1 MGP_NODShiLtJ_G0027791.1 mouse_genomes_project 3 168939198 168954560 + Uox protein_coding retained_intron MGP_NODShiLtJ_T0063917.1 MGP_NODShiLtJ_G0027791.1 mouse_genomes_project 3 168952102 168954465 + Uox protein_coding retained_intron MGP_NODShiLtJ_T0061883.1 MGP_NODShiLtJ_G0027367.1 mouse_genomes_project 3 108301463 108324258 + MGP_NODShiLtJ_P0061883 protein_coding protein_coding MGP_NODShiLtJ_T0061884.1 MGP_NODShiLtJ_G0027367.1 mouse_genomes_project 3 108301468 108314209 + MGP_NODShiLtJ_P0061884 protein_coding protein_coding MGP_NODShiLtJ_T0061885.1 MGP_NODShiLtJ_G0027367.1 mouse_genomes_project 3 108301490 108313814 + MGP_NODShiLtJ_P0061885 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061886.1 MGP_NODShiLtJ_G0027367.1 mouse_genomes_project 3 108301507 108315773 + MGP_NODShiLtJ_P0061886 protein_coding protein_coding MGP_NODShiLtJ_T0061887.1 MGP_NODShiLtJ_G0027367.1 mouse_genomes_project 3 108301508 108321087 + MGP_NODShiLtJ_P0061887 protein_coding protein_coding MGP_NODShiLtJ_T0061888.1 MGP_NODShiLtJ_G0027367.1 mouse_genomes_project 3 108301508 108321071 + MGP_NODShiLtJ_P0061888 protein_coding protein_coding MGP_NODShiLtJ_T0061889.1 MGP_NODShiLtJ_G0027367.1 mouse_genomes_project 3 108310979 108321089 + MGP_NODShiLtJ_P0061889 protein_coding protein_coding MGP_NODShiLtJ_T0061890.1 MGP_NODShiLtJ_G0027367.1 mouse_genomes_project 3 108310979 108321076 + MGP_NODShiLtJ_P0061890 protein_coding protein_coding MGP_NODShiLtJ_T0010431.1 MGP_NODShiLtJ_G0008564.1 mouse_genomes_project 3 105478784 105478894 - Gm23697 miRNA miRNA MGP_NODShiLtJ_T0004296.1 MGP_NODShiLtJ_G0003749.1 mouse_genomes_project 3 134129276 134132062 + Gm29151 antisense antisense MGP_NODShiLtJ_T0007508.1 MGP_NODShiLtJ_G0006143.1 mouse_genomes_project 3 82907303 83093967 + lincRNA lincRNA MGP_NODShiLtJ_T0007509.1 MGP_NODShiLtJ_G0006143.1 mouse_genomes_project 3 82907338 83655560 + lincRNA lincRNA MGP_NODShiLtJ_T0010439.1 MGP_NODShiLtJ_G0008572.1 mouse_genomes_project 3 113763535 113763645 - Mir6481 miRNA miRNA MGP_NODShiLtJ_T0060881.1 MGP_NODShiLtJ_G0027119.1 mouse_genomes_project 3 85964842 85992723 - MGP_NODShiLtJ_P0060881 Serpini2 protein_coding protein_coding MGP_NODShiLtJ_T0001305.1 MGP_NODShiLtJ_G0001226.1 mouse_genomes_project 3 147409060 147411454 - TEC TEC MGP_NODShiLtJ_T0007402.1 MGP_NODShiLtJ_G0006061.1 mouse_genomes_project 3 14904206 14935627 + A930001A20Rik lincRNA lincRNA MGP_NODShiLtJ_T0063031.1 MGP_NODShiLtJ_G0027622.1 mouse_genomes_project 3 133863121 133883130 - MGP_NODShiLtJ_P0063031 Vcam1 protein_coding protein_coding MGP_NODShiLtJ_T0063032.1 MGP_NODShiLtJ_G0027622.1 mouse_genomes_project 3 133870074 133874169 - Vcam1 protein_coding retained_intron MGP_NODShiLtJ_T0063033.1 MGP_NODShiLtJ_G0027622.1 mouse_genomes_project 3 133875731 133882899 - MGP_NODShiLtJ_P0063033 Vcam1 protein_coding protein_coding MGP_NODShiLtJ_T0063034.1 MGP_NODShiLtJ_G0027622.1 mouse_genomes_project 3 133878070 133882345 - MGP_NODShiLtJ_P0063034 Vcam1 protein_coding protein_coding MGP_NODShiLtJ_T0063495.1 MGP_NODShiLtJ_G0027706.1 mouse_genomes_project 3 152894355 152918614 - MGP_NODShiLtJ_P0063495 Aimp1 protein_coding protein_coding MGP_NODShiLtJ_T0063496.1 MGP_NODShiLtJ_G0027706.1 mouse_genomes_project 3 152906521 152909518 - Aimp1 protein_coding retained_intron MGP_NODShiLtJ_T0063497.1 MGP_NODShiLtJ_G0027706.1 mouse_genomes_project 3 152906784 152911969 - Aimp1 protein_coding retained_intron MGP_NODShiLtJ_T0063498.1 MGP_NODShiLtJ_G0027706.1 mouse_genomes_project 3 152908747 152919100 - MGP_NODShiLtJ_P0063498 Aimp1 protein_coding protein_coding MGP_NODShiLtJ_T0063499.1 MGP_NODShiLtJ_G0027706.1 mouse_genomes_project 3 152908837 152918852 - MGP_NODShiLtJ_P0063499 Aimp1 protein_coding protein_coding MGP_NODShiLtJ_T0063500.1 MGP_NODShiLtJ_G0027706.1 mouse_genomes_project 3 152908853 152918567 - MGP_NODShiLtJ_P0063500 Aimp1 protein_coding protein_coding MGP_NODShiLtJ_T0063501.1 MGP_NODShiLtJ_G0027706.1 mouse_genomes_project 3 152909548 152918854 - MGP_NODShiLtJ_P0063501 Aimp1 protein_coding protein_coding MGP_NODShiLtJ_T0063502.1 MGP_NODShiLtJ_G0027706.1 mouse_genomes_project 3 152914608 152918566 - Aimp1 protein_coding retained_intron MGP_NODShiLtJ_T0007642.1 MGP_NODShiLtJ_G0006244.1 mouse_genomes_project 3 150951586 150954341 + Gm43351 lincRNA lincRNA MGP_NODShiLtJ_T0061855.1 MGP_NODShiLtJ_G0027352.1 mouse_genomes_project 3 106978470 106982500 + Flg protein_coding TEC MGP_NODShiLtJ_T0061856.1 MGP_NODShiLtJ_G0027352.1 mouse_genomes_project 3 106978488 106986223 + MGP_NODShiLtJ_P0061856 Flg protein_coding protein_coding MGP_NODShiLtJ_T0061857.1 MGP_NODShiLtJ_G0027352.1 mouse_genomes_project 3 106982022 106986223 + MGP_NODShiLtJ_P0061857 Flg protein_coding protein_coding MGP_NODShiLtJ_T0101861.1 MGP_NODShiLtJ_G0040029.1 mouse_genomes_project 3 72369797 72379484 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010440.1 MGP_NODShiLtJ_G0008573.1 mouse_genomes_project 3 118697365 118697451 - Gm25325 miRNA miRNA MGP_NODShiLtJ_T0098019.1 MGP_NODShiLtJ_G0036431.1 mouse_genomes_project 3 1669141 1669260 + n-R5s194 rRNA rRNA MGP_NODShiLtJ_T0001167.1 MGP_NODShiLtJ_G0001089.1 mouse_genomes_project 3 58074859 58079822 - TEC TEC MGP_NODShiLtJ_T0060797.1 MGP_NODShiLtJ_G0027096.1 mouse_genomes_project 3 75919858 75925775 - MGP_NODShiLtJ_P0060797 Lxn protein_coding protein_coding MGP_NODShiLtJ_T0060798.1 MGP_NODShiLtJ_G0027096.1 mouse_genomes_project 3 75919861 75923488 - Lxn protein_coding retained_intron MGP_NODShiLtJ_T0060799.1 MGP_NODShiLtJ_G0027096.1 mouse_genomes_project 3 75922919 75925631 - Lxn protein_coding retained_intron MGP_NODShiLtJ_T0060683.1 MGP_NODShiLtJ_G0027066.1 mouse_genomes_project 3 68534083 68541513 + MGP_NODShiLtJ_P0060683 P2ry1 protein_coding protein_coding MGP_NODShiLtJ_T0060684.1 MGP_NODShiLtJ_G0027066.1 mouse_genomes_project 3 68534083 68541510 + MGP_NODShiLtJ_P0060684 P2ry1 protein_coding protein_coding MGP_NODShiLtJ_T0060685.1 MGP_NODShiLtJ_G0027066.1 mouse_genomes_project 3 68534087 68536288 + MGP_NODShiLtJ_P0060685 P2ry1 protein_coding protein_coding MGP_NODShiLtJ_T0099235.1 MGP_NODShiLtJ_G0037629.1 mouse_genomes_project 3 175210174 175210236 - Gm25056 snRNA snRNA MGP_NODShiLtJ_T0001231.1 MGP_NODShiLtJ_G0001152.1 mouse_genomes_project 3 103487532 103490091 + TEC TEC MGP_NODShiLtJ_T0064044.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175724658 175794795 + MGP_NODShiLtJ_P0064044 Zzz3 protein_coding protein_coding MGP_NODShiLtJ_T0064045.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175724710 175759109 + Zzz3 protein_coding retained_intron MGP_NODShiLtJ_T0064046.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175725188 175799048 + MGP_NODShiLtJ_P0064046 Zzz3 protein_coding protein_coding MGP_NODShiLtJ_T0064047.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175725217 175780301 + Zzz3 protein_coding processed_transcript MGP_NODShiLtJ_T0064048.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175725264 175779999 + Zzz3 protein_coding processed_transcript MGP_NODShiLtJ_T0064049.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175725316 175794873 + MGP_NODShiLtJ_P0064049 Zzz3 protein_coding protein_coding MGP_NODShiLtJ_T0064050.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175725869 175794798 + MGP_NODShiLtJ_P0064050 Zzz3 protein_coding protein_coding MGP_NODShiLtJ_T0064051.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175725879 175799048 + MGP_NODShiLtJ_P0064051 Zzz3 protein_coding protein_coding MGP_NODShiLtJ_T0064052.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175767153 175770343 + Zzz3 protein_coding retained_intron MGP_NODShiLtJ_T0064053.1 MGP_NODShiLtJ_G0027808.1 mouse_genomes_project 3 175792737 175794139 + Zzz3 protein_coding processed_transcript MGP_NODShiLtJ_T0013806.1 MGP_NODShiLtJ_G0011914.1 mouse_genomes_project 3 12964882 12965283 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010454.1 MGP_NODShiLtJ_G0008587.1 mouse_genomes_project 3 149653428 149653587 - Gm24515 miRNA miRNA MGP_NODShiLtJ_T0001190.1 MGP_NODShiLtJ_G0001111.1 mouse_genomes_project 3 62277039 62279402 + TEC TEC MGP_NODShiLtJ_T0098350.1 MGP_NODShiLtJ_G0036755.1 mouse_genomes_project 3 119236151 119238053 - Gm42701 sense_intronic sense_intronic MGP_NODShiLtJ_T0063818.1 MGP_NODShiLtJ_G0027770.1 mouse_genomes_project 3 167043592 167108562 - MGP_NODShiLtJ_P0063818 protein_coding protein_coding MGP_NODShiLtJ_T0013926.1 MGP_NODShiLtJ_G0012034.1 mouse_genomes_project 3 59377700 59378019 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007404.1 MGP_NODShiLtJ_G0006063.1 mouse_genomes_project 3 17617192 17622755 - Gm30340 lincRNA lincRNA MGP_NODShiLtJ_T0063357.1 MGP_NODShiLtJ_G0027678.1 mouse_genomes_project 3 147311223 147313726 + MGP_NODShiLtJ_P0063357 Neurog2 protein_coding protein_coding MGP_NODShiLtJ_T0007668.1 MGP_NODShiLtJ_G0006267.1 mouse_genomes_project 3 162468101 162469474 + 4930590L14Rik lincRNA lincRNA MGP_NODShiLtJ_T0007614.1 MGP_NODShiLtJ_G0006225.1 mouse_genomes_project 3 139199786 139481892 - lincRNA lincRNA MGP_NODShiLtJ_T0007615.1 MGP_NODShiLtJ_G0006225.1 mouse_genomes_project 3 139291529 139481891 - lincRNA lincRNA MGP_NODShiLtJ_T0007616.1 MGP_NODShiLtJ_G0006225.1 mouse_genomes_project 3 139296065 139481873 - lincRNA lincRNA MGP_NODShiLtJ_T0007617.1 MGP_NODShiLtJ_G0006225.1 mouse_genomes_project 3 139371638 139481850 - lincRNA lincRNA MGP_NODShiLtJ_T0098368.1 MGP_NODShiLtJ_G0036773.1 mouse_genomes_project 3 121039451 121041140 - Gm43331 sense_intronic sense_intronic MGP_NODShiLtJ_T0060457.1 MGP_NODShiLtJ_G0027017.1 mouse_genomes_project 3 59888191 59904588 - MGP_NODShiLtJ_P0060457 Nhlrc3 protein_coding protein_coding MGP_NODShiLtJ_T0060458.1 MGP_NODShiLtJ_G0027017.1 mouse_genomes_project 3 59888196 59904579 - MGP_NODShiLtJ_P0060458 Nhlrc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060459.1 MGP_NODShiLtJ_G0027017.1 mouse_genomes_project 3 59899627 59903239 - Nhlrc3 protein_coding retained_intron MGP_NODShiLtJ_T0060460.1 MGP_NODShiLtJ_G0027017.1 mouse_genomes_project 3 59900132 59904507 - Nhlrc3 protein_coding retained_intron MGP_NODShiLtJ_T0060461.1 MGP_NODShiLtJ_G0027017.1 mouse_genomes_project 3 59903318 59904553 - Nhlrc3 protein_coding retained_intron MGP_NODShiLtJ_T0063522.1 MGP_NODShiLtJ_G0027711.1 mouse_genomes_project 3 153399715 153542184 - MGP_NODShiLtJ_P0063522 protein_coding protein_coding MGP_NODShiLtJ_T0063523.1 MGP_NODShiLtJ_G0027711.1 mouse_genomes_project 3 153404914 153426841 - MGP_NODShiLtJ_P0063523 protein_coding protein_coding MGP_NODShiLtJ_T0063524.1 MGP_NODShiLtJ_G0027711.1 mouse_genomes_project 3 153450045 153542184 - MGP_NODShiLtJ_P0063524 protein_coding protein_coding MGP_NODShiLtJ_T0063525.1 MGP_NODShiLtJ_G0027711.1 mouse_genomes_project 3 153465791 153542244 - MGP_NODShiLtJ_P0063525 protein_coding protein_coding MGP_NODShiLtJ_T0001083.1 MGP_NODShiLtJ_G0001006.1 mouse_genomes_project 3 7231003 7234139 - TEC TEC MGP_NODShiLtJ_T0061810.1 MGP_NODShiLtJ_G0027315.1 mouse_genomes_project 3 105972257 105973601 + MGP_NODShiLtJ_P0061810 Sprr2k protein_coding protein_coding MGP_NODShiLtJ_T0013889.1 MGP_NODShiLtJ_G0011997.1 mouse_genomes_project 3 44096176 44096447 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001243.1 MGP_NODShiLtJ_G0001164.1 mouse_genomes_project 3 111541628 111546089 + TEC TEC MGP_NODShiLtJ_T0100482.1 MGP_NODShiLtJ_G0038876.1 mouse_genomes_project 3 123593753 123593884 + Gm25592 snoRNA snoRNA MGP_NODShiLtJ_T0059923.1 MGP_NODShiLtJ_G0026924.1 mouse_genomes_project 3 29263380 29284876 + MGP_NODShiLtJ_P0059923 Tnfsf10 protein_coding protein_coding MGP_NODShiLtJ_T0059924.1 MGP_NODShiLtJ_G0026924.1 mouse_genomes_project 3 29263413 29287509 + MGP_NODShiLtJ_P0059924 Tnfsf10 protein_coding protein_coding MGP_NODShiLtJ_T0001127.1 MGP_NODShiLtJ_G0001050.1 mouse_genomes_project 3 40285705 40288169 + TEC TEC MGP_NODShiLtJ_T0007550.1 MGP_NODShiLtJ_G0006170.1 mouse_genomes_project 3 101369816 101371089 - Gm37584 lincRNA lincRNA MGP_NODShiLtJ_T0001155.1 MGP_NODShiLtJ_G0001078.1 mouse_genomes_project 3 57227210 57228503 - TEC TEC MGP_NODShiLtJ_T0007450.1 MGP_NODShiLtJ_G0006101.1 mouse_genomes_project 3 41118527 41153449 - Gm43821 lincRNA lincRNA MGP_NODShiLtJ_T0060504.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61341978 61349536 - MGP_NODShiLtJ_P0060504 Exosc8 protein_coding protein_coding MGP_NODShiLtJ_T0060505.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61341981 61342759 - Exosc8 protein_coding retained_intron MGP_NODShiLtJ_T0060506.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61341982 61349180 - Exosc8 protein_coding retained_intron MGP_NODShiLtJ_T0060507.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61343142 61348945 - Exosc8 protein_coding retained_intron MGP_NODShiLtJ_T0060508.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61343154 61348456 - MGP_NODShiLtJ_P0060508 Exosc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060509.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61344609 61349510 - Exosc8 protein_coding retained_intron MGP_NODShiLtJ_T0060510.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61345304 61349189 - MGP_NODShiLtJ_P0060510 Exosc8 protein_coding protein_coding MGP_NODShiLtJ_T0060511.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61345453 61348480 - Exosc8 protein_coding retained_intron MGP_NODShiLtJ_T0060512.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61345463 61346535 - Exosc8 protein_coding retained_intron MGP_NODShiLtJ_T0060513.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61346912 61349178 - Exosc8 protein_coding retained_intron MGP_NODShiLtJ_T0060514.1 MGP_NODShiLtJ_G0027026.1 mouse_genomes_project 3 61348085 61349178 - Exosc8 protein_coding retained_intron MGP_NODShiLtJ_T0007513.1 MGP_NODShiLtJ_G0006147.1 mouse_genomes_project 3 86422075 86430298 - Platr10 lincRNA lincRNA MGP_NODShiLtJ_T0007514.1 MGP_NODShiLtJ_G0006147.1 mouse_genomes_project 3 86422469 86423275 - Platr10 lincRNA lincRNA MGP_NODShiLtJ_T0100431.1 MGP_NODShiLtJ_G0038825.1 mouse_genomes_project 3 5099798 5099911 + Gm22074 snoRNA snoRNA MGP_NODShiLtJ_T0001358.1 MGP_NODShiLtJ_G0001278.1 mouse_genomes_project 3 178451598 178455583 + TEC TEC MGP_NODShiLtJ_T0063739.1 MGP_NODShiLtJ_G0027753.1 mouse_genomes_project 3 163527533 163574405 - MGP_NODShiLtJ_P0063739 Bmpr1b protein_coding protein_coding MGP_NODShiLtJ_T0063740.1 MGP_NODShiLtJ_G0027753.1 mouse_genomes_project 3 163529581 163629971 - MGP_NODShiLtJ_P0063740 Bmpr1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059835.1 MGP_NODShiLtJ_G0026908.1 mouse_genomes_project 3 20342543 20362388 - MGP_NODShiLtJ_P0059835 1700064H15Rik protein_coding protein_coding MGP_NODShiLtJ_T0059809.1 MGP_NODShiLtJ_G0026901.1 mouse_genomes_project 3 18556031 18559375 + MGP_NODShiLtJ_P0059809 Bhlhe22 protein_coding protein_coding MGP_NODShiLtJ_T0062247.1 MGP_NODShiLtJ_G0027431.1 mouse_genomes_project 3 110410223 110411847 - MGP_NODShiLtJ_P0062247 Hist2h4 protein_coding protein_coding MGP_NODShiLtJ_T0007659.1 MGP_NODShiLtJ_G0006260.1 mouse_genomes_project 3 158737553 158748907 - Gm31678 lincRNA lincRNA MGP_NODShiLtJ_T0063872.1 MGP_NODShiLtJ_G0027782.1 mouse_genomes_project 3 168319763 168384500 - MGP_NODShiLtJ_P0063872 Wdr63 protein_coding protein_coding MGP_NODShiLtJ_T0063873.1 MGP_NODShiLtJ_G0027782.1 mouse_genomes_project 3 168319765 168326453 - Wdr63 protein_coding processed_transcript MGP_NODShiLtJ_T0063874.1 MGP_NODShiLtJ_G0027782.1 mouse_genomes_project 3 168322016 168327705 - Wdr63 protein_coding processed_transcript MGP_NODShiLtJ_T0063237.1 MGP_NODShiLtJ_G0027661.1 mouse_genomes_project 3 141799384 141845123 - MGP_NODShiLtJ_P0063237 Myoz2 protein_coding protein_coding MGP_NODShiLtJ_T0063238.1 MGP_NODShiLtJ_G0027661.1 mouse_genomes_project 3 141799695 141844952 - MGP_NODShiLtJ_P0063238 Myoz2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063239.1 MGP_NODShiLtJ_G0027661.1 mouse_genomes_project 3 141799780 141845112 - Myoz2 protein_coding processed_transcript MGP_NODShiLtJ_T0063240.1 MGP_NODShiLtJ_G0027661.1 mouse_genomes_project 3 141809199 141845071 - Myoz2 protein_coding processed_transcript MGP_NODShiLtJ_T0063241.1 MGP_NODShiLtJ_G0027661.1 mouse_genomes_project 3 141822105 141845060 - Myoz2 protein_coding retained_intron MGP_NODShiLtJ_T0062547.1 MGP_NODShiLtJ_G0027509.1 mouse_genomes_project 3 118267110 118353385 + MGP_NODShiLtJ_P0062547 Trim33 protein_coding protein_coding MGP_NODShiLtJ_T0062548.1 MGP_NODShiLtJ_G0027509.1 mouse_genomes_project 3 118267696 118349952 + MGP_NODShiLtJ_P0062548 Trim33 protein_coding protein_coding MGP_NODShiLtJ_T0062549.1 MGP_NODShiLtJ_G0027509.1 mouse_genomes_project 3 118303333 118321401 + MGP_NODShiLtJ_P0062549 Trim33 protein_coding protein_coding MGP_NODShiLtJ_T0062550.1 MGP_NODShiLtJ_G0027509.1 mouse_genomes_project 3 118313670 118318689 + Trim33 protein_coding retained_intron MGP_NODShiLtJ_T0062551.1 MGP_NODShiLtJ_G0027509.1 mouse_genomes_project 3 118318345 118319698 + Trim33 protein_coding retained_intron MGP_NODShiLtJ_T0062552.1 MGP_NODShiLtJ_G0027509.1 mouse_genomes_project 3 118318437 118349014 + MGP_NODShiLtJ_P0062552 Trim33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063023.1 MGP_NODShiLtJ_G0027620.1 mouse_genomes_project 3 133682887 133686924 - Slc30a7 protein_coding processed_transcript MGP_NODShiLtJ_T0063024.1 MGP_NODShiLtJ_G0027620.1 mouse_genomes_project 3 133682887 133753056 - MGP_NODShiLtJ_P0063024 Slc30a7 protein_coding protein_coding MGP_NODShiLtJ_T0063025.1 MGP_NODShiLtJ_G0027620.1 mouse_genomes_project 3 133728533 133737573 - Slc30a7 protein_coding processed_transcript MGP_NODShiLtJ_T0063026.1 MGP_NODShiLtJ_G0027620.1 mouse_genomes_project 3 133736575 133738785 - Slc30a7 protein_coding retained_intron MGP_NODShiLtJ_T0004177.1 MGP_NODShiLtJ_G0003669.1 mouse_genomes_project 3 40282015 40297463 - Fgf2os antisense antisense MGP_NODShiLtJ_T0014024.1 MGP_NODShiLtJ_G0012132.1 mouse_genomes_project 3 96905418 96906409 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064157.1 MGP_NODShiLtJ_G0027827.1 mouse_genomes_project 3 181537639 181625371 + MGP_NODShiLtJ_P0064157 Ptger3 protein_coding protein_coding MGP_NODShiLtJ_T0064158.1 MGP_NODShiLtJ_G0027827.1 mouse_genomes_project 3 181537647 181581330 + Ptger3 protein_coding retained_intron MGP_NODShiLtJ_T0064159.1 MGP_NODShiLtJ_G0027827.1 mouse_genomes_project 3 181537647 181624239 + MGP_NODShiLtJ_P0064159 Ptger3 protein_coding protein_coding MGP_NODShiLtJ_T0001201.1 MGP_NODShiLtJ_G0001122.1 mouse_genomes_project 3 67946601 67950597 + TEC TEC MGP_NODShiLtJ_T0004186.1 MGP_NODShiLtJ_G0003678.1 mouse_genomes_project 3 59536502 59539519 - Gm43803 antisense antisense MGP_NODShiLtJ_T0004187.1 MGP_NODShiLtJ_G0003678.1 mouse_genomes_project 3 59536519 59537823 - Gm43803 antisense antisense MGP_NODShiLtJ_T0014259.1 MGP_NODShiLtJ_G0012367.1 mouse_genomes_project 3 183140067 183141064 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010395.1 MGP_NODShiLtJ_G0008528.1 mouse_genomes_project 3 18259371 18259480 + Mir124a-2 miRNA miRNA MGP_NODShiLtJ_T0004333.1 MGP_NODShiLtJ_G0003777.1 mouse_genomes_project 3 159182335 159211335 - 0610031O16Rik antisense antisense MGP_NODShiLtJ_T0004334.1 MGP_NODShiLtJ_G0003777.1 mouse_genomes_project 3 159189448 159211335 - 0610031O16Rik antisense antisense MGP_NODShiLtJ_T0004335.1 MGP_NODShiLtJ_G0003777.1 mouse_genomes_project 3 159198191 159211351 - 0610031O16Rik antisense antisense MGP_NODShiLtJ_T0004336.1 MGP_NODShiLtJ_G0003777.1 mouse_genomes_project 3 159200698 159212077 - 0610031O16Rik antisense antisense MGP_NODShiLtJ_T0064207.1 MGP_NODShiLtJ_G0027834.1 mouse_genomes_project 3 183932674 183966201 + MGP_NODShiLtJ_P0064207 Rpe65 protein_coding protein_coding MGP_NODShiLtJ_T0064208.1 MGP_NODShiLtJ_G0027834.1 mouse_genomes_project 3 183932717 183951446 + MGP_NODShiLtJ_P0064208 Rpe65 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064209.1 MGP_NODShiLtJ_G0027834.1 mouse_genomes_project 3 183932732 183965947 + MGP_NODShiLtJ_P0064209 Rpe65 protein_coding protein_coding MGP_NODShiLtJ_T0013793.1 MGP_NODShiLtJ_G0011901.1 mouse_genomes_project 3 8246985 8247368 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013980.1 MGP_NODShiLtJ_G0012088.1 mouse_genomes_project 3 77926130 77926671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007689.1 MGP_NODShiLtJ_G0006285.1 mouse_genomes_project 3 166249248 166250344 + Gm43446 lincRNA lincRNA MGP_NODShiLtJ_T0100478.1 MGP_NODShiLtJ_G0038872.1 mouse_genomes_project 3 113684534 113684651 - Gm24216 snoRNA snoRNA MGP_NODShiLtJ_T0060709.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71611564 71773466 - MGP_NODShiLtJ_P0060709 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060710.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71611564 71773418 - MGP_NODShiLtJ_P0060710 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060711.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71611567 71617688 - Plch1 protein_coding retained_intron MGP_NODShiLtJ_T0060712.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71611567 71657963 - Plch1 protein_coding retained_intron MGP_NODShiLtJ_T0060713.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71611567 71773684 - MGP_NODShiLtJ_P0060713 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060714.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71611567 71773418 - MGP_NODShiLtJ_P0060714 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060715.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71611567 71773710 - MGP_NODShiLtJ_P0060715 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060716.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71611568 71773418 - MGP_NODShiLtJ_P0060716 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060717.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71612061 71826138 - MGP_NODShiLtJ_P0060717 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060718.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71614263 71617377 - MGP_NODShiLtJ_P0060718 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060719.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71617149 71773786 - MGP_NODShiLtJ_P0060719 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060720.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71702017 71826108 - MGP_NODShiLtJ_P0060720 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0060721.1 MGP_NODShiLtJ_G0027073.1 mouse_genomes_project 3 71793732 71826039 - MGP_NODShiLtJ_P0060721 Plch1 protein_coding protein_coding MGP_NODShiLtJ_T0004308.1 MGP_NODShiLtJ_G0003758.1 mouse_genomes_project 3 143387157 143388854 + Gm42823 antisense antisense MGP_NODShiLtJ_T0060619.1 MGP_NODShiLtJ_G0027051.1 mouse_genomes_project 3 65776243 65793595 - MGP_NODShiLtJ_P0060619 Siah2 protein_coding protein_coding MGP_NODShiLtJ_T0060620.1 MGP_NODShiLtJ_G0027051.1 mouse_genomes_project 3 65777481 65787336 - Siah2 protein_coding processed_transcript MGP_NODShiLtJ_T0062253.1 MGP_NODShiLtJ_G0027435.1 mouse_genomes_project 3 110725169 110729261 + MGP_NODShiLtJ_P0062253 Hfe2 protein_coding protein_coding MGP_NODShiLtJ_T0100481.1 MGP_NODShiLtJ_G0038875.1 mouse_genomes_project 3 119301842 119301958 + Gm23077 snoRNA snoRNA MGP_NODShiLtJ_T0007521.1 MGP_NODShiLtJ_G0006152.1 mouse_genomes_project 3 91799539 91981564 + A330069K06Rik lincRNA lincRNA MGP_NODShiLtJ_T0014088.1 MGP_NODShiLtJ_G0012196.1 mouse_genomes_project 3 115114761 115115782 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007719.1 MGP_NODShiLtJ_G0006306.1 mouse_genomes_project 3 179705133 179750274 + 9330178D15Rik lincRNA lincRNA MGP_NODShiLtJ_T0013888.1 MGP_NODShiLtJ_G0011996.1 mouse_genomes_project 3 43813430 43813730 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001293.1 MGP_NODShiLtJ_G0001214.1 mouse_genomes_project 3 146342735 146344571 + TEC TEC MGP_NODShiLtJ_T0063911.1 MGP_NODShiLtJ_G0027792.1 mouse_genomes_project 3 168918909 168957735 - MGP_NODShiLtJ_P0063911 Dnase2b protein_coding protein_coding MGP_NODShiLtJ_T0063912.1 MGP_NODShiLtJ_G0027792.1 mouse_genomes_project 3 168918909 168938645 - MGP_NODShiLtJ_P0063912 Dnase2b protein_coding protein_coding MGP_NODShiLtJ_T0010449.1 MGP_NODShiLtJ_G0008582.1 mouse_genomes_project 3 147207300 147207374 + Mir302b miRNA miRNA MGP_NODShiLtJ_T0064033.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175674831 175722519 + MGP_NODShiLtJ_P0064033 Usp33 protein_coding protein_coding MGP_NODShiLtJ_T0064034.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175674831 175722798 + MGP_NODShiLtJ_P0064034 Usp33 protein_coding protein_coding MGP_NODShiLtJ_T0064035.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175674842 175722803 + MGP_NODShiLtJ_P0064035 Usp33 protein_coding protein_coding MGP_NODShiLtJ_T0064036.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175674865 175700181 + MGP_NODShiLtJ_P0064036 Usp33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064037.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175674868 175686629 + Usp33 protein_coding retained_intron MGP_NODShiLtJ_T0064038.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175690178 175696773 + Usp33 protein_coding processed_transcript MGP_NODShiLtJ_T0064039.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175692182 175695438 + Usp33 protein_coding retained_intron MGP_NODShiLtJ_T0064040.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175694557 175701897 + Usp33 protein_coding retained_intron MGP_NODShiLtJ_T0064041.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175696711 175703263 + MGP_NODShiLtJ_P0064041 Usp33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064042.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175710323 175721693 + Usp33 protein_coding processed_transcript MGP_NODShiLtJ_T0064043.1 MGP_NODShiLtJ_G0027807.1 mouse_genomes_project 3 175710811 175712570 + Usp33 protein_coding retained_intron MGP_NODShiLtJ_T0013901.1 MGP_NODShiLtJ_G0012009.1 mouse_genomes_project 3 50503180 50503439 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001180.1 MGP_NODShiLtJ_G0001101.1 mouse_genomes_project 3 59497068 59500166 - TEC TEC MGP_NODShiLtJ_T0013934.1 MGP_NODShiLtJ_G0012042.1 mouse_genomes_project 3 64146852 64147481 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007658.1 MGP_NODShiLtJ_G0006259.1 mouse_genomes_project 3 158629902 158638153 + Gm42610 lincRNA lincRNA MGP_NODShiLtJ_T0099202.1 MGP_NODShiLtJ_G0037596.1 mouse_genomes_project 3 109088861 109088968 + Gm22301 snRNA snRNA MGP_NODShiLtJ_T0014094.1 MGP_NODShiLtJ_G0012202.1 mouse_genomes_project 3 116909131 116909408 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013813.1 MGP_NODShiLtJ_G0011921.1 mouse_genomes_project 3 14390734 14391945 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013860.1 MGP_NODShiLtJ_G0011968.1 mouse_genomes_project 3 36299025 36301960 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060010.1 MGP_NODShiLtJ_G0026941.1 mouse_genomes_project 3 33137541 33169365 + MGP_NODShiLtJ_P0060010 Sec62 protein_coding protein_coding MGP_NODShiLtJ_T0060011.1 MGP_NODShiLtJ_G0026941.1 mouse_genomes_project 3 33138002 33146187 + Sec62 protein_coding retained_intron MGP_NODShiLtJ_T0060012.1 MGP_NODShiLtJ_G0026941.1 mouse_genomes_project 3 33166952 33168134 + Sec62 protein_coding processed_transcript MGP_NODShiLtJ_T0059866.1 MGP_NODShiLtJ_G0026913.1 mouse_genomes_project 3 20829578 20903258 + MGP_NODShiLtJ_P0059866 Hltf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059867.1 MGP_NODShiLtJ_G0026913.1 mouse_genomes_project 3 20829578 20904467 + MGP_NODShiLtJ_P0059867 Hltf protein_coding protein_coding MGP_NODShiLtJ_T0059868.1 MGP_NODShiLtJ_G0026913.1 mouse_genomes_project 3 20829587 20893769 + Hltf protein_coding retained_intron MGP_NODShiLtJ_T0059869.1 MGP_NODShiLtJ_G0026913.1 mouse_genomes_project 3 20829620 20836689 + Hltf protein_coding retained_intron MGP_NODShiLtJ_T0059870.1 MGP_NODShiLtJ_G0026913.1 mouse_genomes_project 3 20830941 20904453 + MGP_NODShiLtJ_P0059870 Hltf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059871.1 MGP_NODShiLtJ_G0026913.1 mouse_genomes_project 3 20893744 20904467 + Hltf protein_coding retained_intron MGP_NODShiLtJ_T0063844.1 MGP_NODShiLtJ_G0027775.1 mouse_genomes_project 3 167476054 167758688 + MGP_NODShiLtJ_P0063844 Col24a1 protein_coding protein_coding MGP_NODShiLtJ_T0063845.1 MGP_NODShiLtJ_G0027775.1 mouse_genomes_project 3 167476109 167498683 + MGP_NODShiLtJ_P0063845 Col24a1 protein_coding protein_coding MGP_NODShiLtJ_T0063846.1 MGP_NODShiLtJ_G0027775.1 mouse_genomes_project 3 167716032 167742305 + Col24a1 protein_coding processed_transcript MGP_NODShiLtJ_T0063847.1 MGP_NODShiLtJ_G0027775.1 mouse_genomes_project 3 167751652 167758683 + Col24a1 protein_coding retained_intron MGP_NODShiLtJ_T0007648.1 MGP_NODShiLtJ_G0006250.1 mouse_genomes_project 3 154160662 154162619 - Gm6135 lincRNA lincRNA MGP_NODShiLtJ_T0061014.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96214140 96363917 - MGP_NODShiLtJ_P0061014 D930015E06Rik protein_coding protein_coding MGP_NODShiLtJ_T0061015.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96214694 96363879 - MGP_NODShiLtJ_P0061015 D930015E06Rik protein_coding protein_coding MGP_NODShiLtJ_T0061016.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96214694 96363917 - MGP_NODShiLtJ_P0061016 D930015E06Rik protein_coding protein_coding MGP_NODShiLtJ_T0061017.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96214695 96225708 - D930015E06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0061018.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96216817 96224065 - D930015E06Rik protein_coding retained_intron MGP_NODShiLtJ_T0061019.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96216831 96226034 - D930015E06Rik protein_coding retained_intron MGP_NODShiLtJ_T0061020.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96237828 96283913 - D930015E06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0061021.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96256322 96259596 - D930015E06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0061022.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96354057 96363870 - D930015E06Rik protein_coding retained_intron MGP_NODShiLtJ_T0061023.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96360920 96363903 - D930015E06Rik protein_coding retained_intron MGP_NODShiLtJ_T0061024.1 MGP_NODShiLtJ_G0027153.1 mouse_genomes_project 3 96361118 96363876 - D930015E06Rik protein_coding retained_intron MGP_NODShiLtJ_T0014166.1 MGP_NODShiLtJ_G0012274.1 mouse_genomes_project 3 141693771 141693966 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001342.1 MGP_NODShiLtJ_G0001262.1 mouse_genomes_project 3 171017791 171018661 + TEC TEC MGP_NODShiLtJ_T0061307.1 MGP_NODShiLtJ_G0027214.1 mouse_genomes_project 3 101376168 101387307 + MGP_NODShiLtJ_P0061307 Mex3a protein_coding protein_coding MGP_NODShiLtJ_T0100496.1 MGP_NODShiLtJ_G0038890.1 mouse_genomes_project 3 153042143 153042254 - Gm22322 snoRNA snoRNA MGP_NODShiLtJ_T0013885.1 MGP_NODShiLtJ_G0011993.1 mouse_genomes_project 3 42254267 42254640 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061272.1 MGP_NODShiLtJ_G0027208.1 mouse_genomes_project 3 101154599 101155430 - protein_coding retained_intron MGP_NODShiLtJ_T0001247.1 MGP_NODShiLtJ_G0001168.1 mouse_genomes_project 3 112416852 112421971 + TEC TEC MGP_NODShiLtJ_T0013862.1 MGP_NODShiLtJ_G0011970.1 mouse_genomes_project 3 36802639 36803525 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062265.1 MGP_NODShiLtJ_G0027440.1 mouse_genomes_project 3 110803878 110846269 + MGP_NODShiLtJ_P0062265 Lix1l protein_coding protein_coding MGP_NODShiLtJ_T0062266.1 MGP_NODShiLtJ_G0027440.1 mouse_genomes_project 3 110837674 110842325 + Lix1l protein_coding retained_intron MGP_NODShiLtJ_T0001303.1 MGP_NODShiLtJ_G0001224.1 mouse_genomes_project 3 146916086 146918163 - TEC TEC MGP_NODShiLtJ_T0063035.1 MGP_NODShiLtJ_G0027623.1 mouse_genomes_project 3 134020451 134024309 - MGP_NODShiLtJ_P0063035 Gpr88 protein_coding protein_coding MGP_NODShiLtJ_T0063036.1 MGP_NODShiLtJ_G0027623.1 mouse_genomes_project 3 134023362 134023895 - MGP_NODShiLtJ_P0063036 Gpr88 protein_coding protein_coding MGP_NODShiLtJ_T0063037.1 MGP_NODShiLtJ_G0027623.1 mouse_genomes_project 3 134023475 134024269 - Gpr88 protein_coding processed_transcript MGP_NODShiLtJ_T0060771.1 MGP_NODShiLtJ_G0027090.1 mouse_genomes_project 3 74517205 74523100 + MGP_NODShiLtJ_P0060771 Ptx3 protein_coding protein_coding MGP_NODShiLtJ_T0060772.1 MGP_NODShiLtJ_G0027090.1 mouse_genomes_project 3 74517540 74518726 + Ptx3 protein_coding retained_intron MGP_NODShiLtJ_T0060531.1 MGP_NODShiLtJ_G0027032.1 mouse_genomes_project 3 61791214 61816324 + MGP_NODShiLtJ_P0060531 Spg20 protein_coding protein_coding MGP_NODShiLtJ_T0060532.1 MGP_NODShiLtJ_G0027032.1 mouse_genomes_project 3 61791219 61808328 + Spg20 protein_coding retained_intron MGP_NODShiLtJ_T0060533.1 MGP_NODShiLtJ_G0027032.1 mouse_genomes_project 3 61791235 61816313 + MGP_NODShiLtJ_P0060533 Spg20 protein_coding protein_coding MGP_NODShiLtJ_T0060534.1 MGP_NODShiLtJ_G0027032.1 mouse_genomes_project 3 61791244 61793356 + Spg20 protein_coding retained_intron MGP_NODShiLtJ_T0060535.1 MGP_NODShiLtJ_G0027032.1 mouse_genomes_project 3 61791272 61816319 + MGP_NODShiLtJ_P0060535 Spg20 protein_coding protein_coding MGP_NODShiLtJ_T0060536.1 MGP_NODShiLtJ_G0027032.1 mouse_genomes_project 3 61791493 61808696 + MGP_NODShiLtJ_P0060536 Spg20 protein_coding protein_coding MGP_NODShiLtJ_T0060537.1 MGP_NODShiLtJ_G0027032.1 mouse_genomes_project 3 61791702 61796300 + MGP_NODShiLtJ_P0060537 Spg20 protein_coding protein_coding MGP_NODShiLtJ_T0060538.1 MGP_NODShiLtJ_G0027032.1 mouse_genomes_project 3 61795214 61796372 + MGP_NODShiLtJ_P0060538 Spg20 protein_coding protein_coding MGP_NODShiLtJ_T0013776.1 MGP_NODShiLtJ_G0011884.1 mouse_genomes_project 3 4053914 4054330 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060481.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60929287 60960517 + MGP_NODShiLtJ_P0060481 Postn protein_coding protein_coding MGP_NODShiLtJ_T0060482.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60929287 60960520 + MGP_NODShiLtJ_P0060482 Postn protein_coding protein_coding MGP_NODShiLtJ_T0060483.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60929303 60960517 + MGP_NODShiLtJ_P0060483 Postn protein_coding protein_coding MGP_NODShiLtJ_T0060484.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60929321 60959935 + MGP_NODShiLtJ_P0060484 Postn protein_coding protein_coding MGP_NODShiLtJ_T0060485.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60945731 60960130 + MGP_NODShiLtJ_P0060485 Postn protein_coding protein_coding MGP_NODShiLtJ_T0060486.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60946651 60952879 + Postn protein_coding retained_intron MGP_NODShiLtJ_T0060487.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60951273 60959970 + Postn protein_coding retained_intron MGP_NODShiLtJ_T0060488.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60951275 60960065 + Postn protein_coding retained_intron MGP_NODShiLtJ_T0060489.1 MGP_NODShiLtJ_G0027023.1 mouse_genomes_project 3 60958371 60959876 + Postn protein_coding retained_intron MGP_NODShiLtJ_T0001089.1 MGP_NODShiLtJ_G0001012.1 mouse_genomes_project 3 12764397 12768098 + TEC TEC MGP_NODShiLtJ_T0062029.1 MGP_NODShiLtJ_G0027390.1 mouse_genomes_project 3 109132734 109135574 - MGP_NODShiLtJ_P0062029 Tnfaip8l2 protein_coding protein_coding MGP_NODShiLtJ_T0007598.1 MGP_NODShiLtJ_G0006210.1 mouse_genomes_project 3 123578118 123584977 - Gm12498 lincRNA lincRNA MGP_NODShiLtJ_T0101126.1 MGP_NODShiLtJ_G0039462.1 mouse_genomes_project 3 141546018 141546312 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0004173.1 MGP_NODShiLtJ_G0003666.1 mouse_genomes_project 3 39009529 39011864 + Gm43255 antisense antisense MGP_NODShiLtJ_T0007457.1 MGP_NODShiLtJ_G0006106.1 mouse_genomes_project 3 43755544 43775033 - 1700017G19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007458.1 MGP_NODShiLtJ_G0006106.1 mouse_genomes_project 3 43759107 43760452 - 1700017G19Rik lincRNA lincRNA MGP_NODShiLtJ_T0010430.1 MGP_NODShiLtJ_G0008563.1 mouse_genomes_project 3 103408766 103408830 + Mir7012 miRNA miRNA MGP_NODShiLtJ_T0061691.1 MGP_NODShiLtJ_G0027274.1 mouse_genomes_project 3 103383271 103391659 + MGP_NODShiLtJ_P0061691 protein_coding protein_coding MGP_NODShiLtJ_T0098333.1 MGP_NODShiLtJ_G0036738.1 mouse_genomes_project 3 116381335 116382087 - Gm42937 sense_intronic sense_intronic MGP_NODShiLtJ_T0007660.1 MGP_NODShiLtJ_G0006261.1 mouse_genomes_project 3 158875677 158876115 - Gm43689 lincRNA lincRNA MGP_NODShiLtJ_T0014151.1 MGP_NODShiLtJ_G0012259.1 mouse_genomes_project 3 135130476 135131119 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001279.1 MGP_NODShiLtJ_G0001200.1 mouse_genomes_project 3 141982438 141983038 - TEC TEC MGP_NODShiLtJ_T0099207.1 MGP_NODShiLtJ_G0037601.1 mouse_genomes_project 3 110649165 110649883 + Gm22614 snRNA snRNA MGP_NODShiLtJ_T0007624.1 MGP_NODShiLtJ_G0006230.1 mouse_genomes_project 3 141354969 141362869 - Gm43568 lincRNA lincRNA MGP_NODShiLtJ_T0007625.1 MGP_NODShiLtJ_G0006230.1 mouse_genomes_project 3 141359911 141362364 - Gm43568 lincRNA lincRNA MGP_NODShiLtJ_T0007626.1 MGP_NODShiLtJ_G0006230.1 mouse_genomes_project 3 141361326 141362586 - Gm43568 lincRNA lincRNA MGP_NODShiLtJ_T0061126.1 MGP_NODShiLtJ_G0027179.1 mouse_genomes_project 3 100192784 100208291 + MGP_NODShiLtJ_P0061126 Etv3 protein_coding protein_coding MGP_NODShiLtJ_T0061127.1 MGP_NODShiLtJ_G0027179.1 mouse_genomes_project 3 100192955 100208277 + MGP_NODShiLtJ_P0061127 Etv3 protein_coding protein_coding MGP_NODShiLtJ_T0061128.1 MGP_NODShiLtJ_G0027179.1 mouse_genomes_project 3 100192984 100208291 + Etv3 protein_coding retained_intron MGP_NODShiLtJ_T0061129.1 MGP_NODShiLtJ_G0027179.1 mouse_genomes_project 3 100192991 100198430 + MGP_NODShiLtJ_P0061129 Etv3 protein_coding protein_coding MGP_NODShiLtJ_T0061130.1 MGP_NODShiLtJ_G0027179.1 mouse_genomes_project 3 100192995 100198433 + Etv3 protein_coding retained_intron MGP_NODShiLtJ_T0061846.1 MGP_NODShiLtJ_G0027347.1 mouse_genomes_project 3 106680858 106682172 - MGP_NODShiLtJ_P0061846 Lce1m protein_coding protein_coding MGP_NODShiLtJ_T0061847.1 MGP_NODShiLtJ_G0027347.1 mouse_genomes_project 3 106681618 106682171 - MGP_NODShiLtJ_P0061847 Lce1m protein_coding protein_coding MGP_NODShiLtJ_T0060185.1 MGP_NODShiLtJ_G0026971.1 mouse_genomes_project 3 38985515 39033316 - MGP_NODShiLtJ_P0060185 Qrfpr protein_coding protein_coding MGP_NODShiLtJ_T0060186.1 MGP_NODShiLtJ_G0026971.1 mouse_genomes_project 3 38994044 39033257 - Qrfpr protein_coding retained_intron MGP_NODShiLtJ_T0098347.1 MGP_NODShiLtJ_G0036752.1 mouse_genomes_project 3 119181323 119183724 - Gm42700 sense_intronic sense_intronic MGP_NODShiLtJ_T0001171.1 MGP_NODShiLtJ_G0001093.1 mouse_genomes_project 3 58211618 58214234 - TEC TEC MGP_NODShiLtJ_T0013983.1 MGP_NODShiLtJ_G0012091.1 mouse_genomes_project 3 78303889 78304286 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061010.1 MGP_NODShiLtJ_G0027151.1 mouse_genomes_project 3 96068534 96076531 + MGP_NODShiLtJ_P0061010 Sfrp2 protein_coding protein_coding MGP_NODShiLtJ_T0061011.1 MGP_NODShiLtJ_G0027151.1 mouse_genomes_project 3 96068778 96072362 + Sfrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0061012.1 MGP_NODShiLtJ_G0027151.1 mouse_genomes_project 3 96069066 96074371 + Sfrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0001334.1 MGP_NODShiLtJ_G0001254.1 mouse_genomes_project 3 157544529 157546052 + TEC TEC MGP_NODShiLtJ_T0098374.1 MGP_NODShiLtJ_G0036779.1 mouse_genomes_project 3 166514932 166515705 - Gm43560 sense_intronic sense_intronic MGP_NODShiLtJ_T0063707.1 MGP_NODShiLtJ_G0027747.1 mouse_genomes_project 3 159553115 159586677 + MGP_NODShiLtJ_P0063707 Eif4e protein_coding protein_coding MGP_NODShiLtJ_T0063708.1 MGP_NODShiLtJ_G0027747.1 mouse_genomes_project 3 159553361 159582380 + MGP_NODShiLtJ_P0063708 Eif4e protein_coding protein_coding MGP_NODShiLtJ_T0063709.1 MGP_NODShiLtJ_G0027747.1 mouse_genomes_project 3 159554257 159583195 + MGP_NODShiLtJ_P0063709 Eif4e protein_coding protein_coding MGP_NODShiLtJ_T0063710.1 MGP_NODShiLtJ_G0027747.1 mouse_genomes_project 3 159554257 159582539 + MGP_NODShiLtJ_P0063710 Eif4e protein_coding protein_coding MGP_NODShiLtJ_T0063711.1 MGP_NODShiLtJ_G0027747.1 mouse_genomes_project 3 159554268 159582655 + MGP_NODShiLtJ_P0063711 Eif4e protein_coding protein_coding MGP_NODShiLtJ_T0063712.1 MGP_NODShiLtJ_G0027747.1 mouse_genomes_project 3 159577835 159580702 + Eif4e protein_coding retained_intron MGP_NODShiLtJ_T0007418.1 MGP_NODShiLtJ_G0006072.1 mouse_genomes_project 3 23077674 23079405 - Gm43672 lincRNA lincRNA MGP_NODShiLtJ_T0061576.1 MGP_NODShiLtJ_G0027258.1 mouse_genomes_project 3 102525980 102678325 + MGP_NODShiLtJ_P0061576 Kcnn3 protein_coding protein_coding MGP_NODShiLtJ_T0061577.1 MGP_NODShiLtJ_G0027258.1 mouse_genomes_project 3 102673139 102688107 + Kcnn3 protein_coding retained_intron MGP_NODShiLtJ_T0059739.1 MGP_NODShiLtJ_G0026876.1 mouse_genomes_project 3 8818158 8835565 - MGP_NODShiLtJ_P0059739 Gm37389 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013867.1 MGP_NODShiLtJ_G0011975.1 mouse_genomes_project 3 39023698 39024641 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004360.1 MGP_NODShiLtJ_G0003797.1 mouse_genomes_project 3 182074278 182084024 - B230334C09Rik antisense antisense MGP_NODShiLtJ_T0004329.1 MGP_NODShiLtJ_G0003774.1 mouse_genomes_project 3 158816006 158817820 - Gm43403 antisense antisense MGP_NODShiLtJ_T0004330.1 MGP_NODShiLtJ_G0003774.1 mouse_genomes_project 3 158817133 158817630 - Gm43403 antisense antisense MGP_NODShiLtJ_T0007428.1 MGP_NODShiLtJ_G0006082.1 mouse_genomes_project 3 36463072 36496642 - 4930431L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0007429.1 MGP_NODShiLtJ_G0006082.1 mouse_genomes_project 3 36467233 36468199 - 4930431L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0014182.1 MGP_NODShiLtJ_G0012290.1 mouse_genomes_project 3 149385228 149386271 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098330.1 MGP_NODShiLtJ_G0036735.1 mouse_genomes_project 3 115848105 115852181 - Gm43465 sense_intronic sense_intronic MGP_NODShiLtJ_T0060539.1 MGP_NODShiLtJ_G0027033.1 mouse_genomes_project 3 61816340 61851983 + MGP_NODShiLtJ_P0060539 Ccdc169 protein_coding protein_coding MGP_NODShiLtJ_T0060540.1 MGP_NODShiLtJ_G0027033.1 mouse_genomes_project 3 61819054 61850592 + MGP_NODShiLtJ_P0060540 Ccdc169 protein_coding protein_coding MGP_NODShiLtJ_T0060541.1 MGP_NODShiLtJ_G0027033.1 mouse_genomes_project 3 61819054 61849540 + MGP_NODShiLtJ_P0060541 Ccdc169 protein_coding protein_coding MGP_NODShiLtJ_T0060542.1 MGP_NODShiLtJ_G0027033.1 mouse_genomes_project 3 61819071 61836102 + MGP_NODShiLtJ_P0060542 Ccdc169 protein_coding protein_coding MGP_NODShiLtJ_T0060543.1 MGP_NODShiLtJ_G0027033.1 mouse_genomes_project 3 61821306 61850646 + MGP_NODShiLtJ_P0060543 Ccdc169 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060544.1 MGP_NODShiLtJ_G0027033.1 mouse_genomes_project 3 61821306 61850646 + MGP_NODShiLtJ_P0060544 Ccdc169 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013978.1 MGP_NODShiLtJ_G0012086.1 mouse_genomes_project 3 76875380 76875965 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063364.1 MGP_NODShiLtJ_G0027680.1 mouse_genomes_project 3 147496815 147521979 + MGP_NODShiLtJ_P0063364 Tifa protein_coding protein_coding MGP_NODShiLtJ_T0063365.1 MGP_NODShiLtJ_G0027680.1 mouse_genomes_project 3 147496920 147556204 + Tifa protein_coding processed_transcript MGP_NODShiLtJ_T0063366.1 MGP_NODShiLtJ_G0027680.1 mouse_genomes_project 3 147496922 147521538 + MGP_NODShiLtJ_P0063366 Tifa protein_coding protein_coding MGP_NODShiLtJ_T0063367.1 MGP_NODShiLtJ_G0027680.1 mouse_genomes_project 3 147497665 147521538 + MGP_NODShiLtJ_P0063367 Tifa protein_coding protein_coding MGP_NODShiLtJ_T0063368.1 MGP_NODShiLtJ_G0027680.1 mouse_genomes_project 3 147497814 147521979 + MGP_NODShiLtJ_P0063368 Tifa protein_coding protein_coding MGP_NODShiLtJ_T0062707.1 MGP_NODShiLtJ_G0027544.1 mouse_genomes_project 3 121265444 121279816 - MGP_NODShiLtJ_P0062707 Pifo protein_coding protein_coding MGP_NODShiLtJ_T0062708.1 MGP_NODShiLtJ_G0027544.1 mouse_genomes_project 3 121265453 121270616 - MGP_NODShiLtJ_P0062708 Pifo protein_coding protein_coding MGP_NODShiLtJ_T0061235.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101059937 101086549 + MGP_NODShiLtJ_P0061235 Cct3 protein_coding protein_coding MGP_NODShiLtJ_T0061236.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101059938 101061769 + Cct3 protein_coding retained_intron MGP_NODShiLtJ_T0061237.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101059944 101086289 + Cct3 protein_coding retained_intron MGP_NODShiLtJ_T0061238.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101059947 101079330 + Cct3 protein_coding retained_intron MGP_NODShiLtJ_T0061239.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101059974 101086289 + Cct3 protein_coding retained_intron MGP_NODShiLtJ_T0061240.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101059995 101086548 + MGP_NODShiLtJ_P0061240 Cct3 protein_coding protein_coding MGP_NODShiLtJ_T0061241.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101060009 101086289 + MGP_NODShiLtJ_P0061241 Cct3 protein_coding protein_coding MGP_NODShiLtJ_T0061242.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101067037 101085432 + MGP_NODShiLtJ_P0061242 Cct3 protein_coding protein_coding MGP_NODShiLtJ_T0061243.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101085776 101086546 + Cct3 protein_coding retained_intron MGP_NODShiLtJ_T0061244.1 MGP_NODShiLtJ_G0027203.1 mouse_genomes_project 3 101085829 101086547 + MGP_NODShiLtJ_P0061244 Cct3 protein_coding protein_coding MGP_NODShiLtJ_T0063478.1 MGP_NODShiLtJ_G0027700.1 mouse_genomes_project 3 151343369 151383447 - MGP_NODShiLtJ_P0063478 Hadh protein_coding protein_coding MGP_NODShiLtJ_T0063479.1 MGP_NODShiLtJ_G0027700.1 mouse_genomes_project 3 151356517 151383370 - Hadh protein_coding retained_intron MGP_NODShiLtJ_T0014018.1 MGP_NODShiLtJ_G0012126.1 mouse_genomes_project 3 93404435 93404715 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007670.1 MGP_NODShiLtJ_G0006269.1 mouse_genomes_project 3 164881228 164897896 + 4930519L02Rik lincRNA lincRNA MGP_NODShiLtJ_T0013869.1 MGP_NODShiLtJ_G0011977.1 mouse_genomes_project 3 39253367 39253914 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001354.1 MGP_NODShiLtJ_G0001274.1 mouse_genomes_project 3 176714367 176717735 - TEC TEC MGP_NODShiLtJ_T0061824.1 MGP_NODShiLtJ_G0027327.1 mouse_genomes_project 3 106260111 106261418 - MGP_NODShiLtJ_P0061824 Lce1b protein_coding protein_coding MGP_NODShiLtJ_T0098338.1 MGP_NODShiLtJ_G0036743.1 mouse_genomes_project 3 118066146 118070169 + sense_intronic sense_intronic MGP_NODShiLtJ_T0014082.1 MGP_NODShiLtJ_G0012190.1 mouse_genomes_project 3 113658706 113659290 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001336.1 MGP_NODShiLtJ_G0001256.1 mouse_genomes_project 3 158856376 158858700 + TEC TEC MGP_NODShiLtJ_T0062199.1 MGP_NODShiLtJ_G0027418.1 mouse_genomes_project 3 110023424 110031099 - MGP_NODShiLtJ_P0062199 Car14 protein_coding protein_coding MGP_NODShiLtJ_T0062200.1 MGP_NODShiLtJ_G0027418.1 mouse_genomes_project 3 110025395 110031093 - MGP_NODShiLtJ_P0062200 Car14 protein_coding protein_coding MGP_NODShiLtJ_T0062201.1 MGP_NODShiLtJ_G0027418.1 mouse_genomes_project 3 110027167 110031092 - Car14 protein_coding retained_intron MGP_NODShiLtJ_T0062202.1 MGP_NODShiLtJ_G0027418.1 mouse_genomes_project 3 110027548 110030156 - Car14 protein_coding retained_intron MGP_NODShiLtJ_T0001124.1 MGP_NODShiLtJ_G0001047.1 mouse_genomes_project 3 38757230 38759873 - TEC TEC MGP_NODShiLtJ_T0007590.1 MGP_NODShiLtJ_G0006205.1 mouse_genomes_project 3 121069177 121072174 + Gm5547 lincRNA lincRNA MGP_NODShiLtJ_T0007591.1 MGP_NODShiLtJ_G0006205.1 mouse_genomes_project 3 121069204 121072167 + Gm5547 lincRNA lincRNA MGP_NODShiLtJ_T0007592.1 MGP_NODShiLtJ_G0006205.1 mouse_genomes_project 3 121070291 121072175 + Gm5547 lincRNA lincRNA MGP_NODShiLtJ_T0014260.1 MGP_NODShiLtJ_G0012368.1 mouse_genomes_project 3 183803922 183804144 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014087.1 MGP_NODShiLtJ_G0012195.1 mouse_genomes_project 3 114738557 114738725 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060876.1 MGP_NODShiLtJ_G0027118.1 mouse_genomes_project 3 85690120 85837209 - MGP_NODShiLtJ_P0060876 Zbbx protein_coding protein_coding MGP_NODShiLtJ_T0060877.1 MGP_NODShiLtJ_G0027118.1 mouse_genomes_project 3 85690131 85837167 - MGP_NODShiLtJ_P0060877 Zbbx protein_coding protein_coding MGP_NODShiLtJ_T0060878.1 MGP_NODShiLtJ_G0027118.1 mouse_genomes_project 3 85715516 85837140 - MGP_NODShiLtJ_P0060878 Zbbx protein_coding protein_coding MGP_NODShiLtJ_T0060879.1 MGP_NODShiLtJ_G0027118.1 mouse_genomes_project 3 85739329 85837209 - MGP_NODShiLtJ_P0060879 Zbbx protein_coding protein_coding MGP_NODShiLtJ_T0060880.1 MGP_NODShiLtJ_G0027118.1 mouse_genomes_project 3 85795424 85865933 - MGP_NODShiLtJ_P0060880 Zbbx protein_coding protein_coding MGP_NODShiLtJ_T0062825.1 MGP_NODShiLtJ_G0027577.1 mouse_genomes_project 3 123502922 123509325 - MGP_NODShiLtJ_P0062825 Gstm3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062826.1 MGP_NODShiLtJ_G0027577.1 mouse_genomes_project 3 123502925 123509468 - MGP_NODShiLtJ_P0062826 Gstm3 protein_coding protein_coding MGP_NODShiLtJ_T0014120.1 MGP_NODShiLtJ_G0012228.1 mouse_genomes_project 3 123815560 123816089 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013804.1 MGP_NODShiLtJ_G0011912.1 mouse_genomes_project 3 12237957 12238921 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001095.1 MGP_NODShiLtJ_G0001018.1 mouse_genomes_project 3 23875978 23876229 + TEC TEC MGP_NODShiLtJ_T0007494.1 MGP_NODShiLtJ_G0006131.1 mouse_genomes_project 3 65120347 65172055 + 4921539H07Rik lincRNA lincRNA MGP_NODShiLtJ_T0007496.1 MGP_NODShiLtJ_G0006131.1 mouse_genomes_project 3 65170913 65174598 + 4921539H07Rik lincRNA lincRNA MGP_NODShiLtJ_T0064117.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178119878 178145551 + MGP_NODShiLtJ_P0064117 Cryz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064118.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178119878 178145551 + MGP_NODShiLtJ_P0064118 Cryz protein_coding protein_coding MGP_NODShiLtJ_T0064119.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178119878 178145549 + MGP_NODShiLtJ_P0064119 Cryz protein_coding protein_coding MGP_NODShiLtJ_T0064120.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178120311 178144536 + MGP_NODShiLtJ_P0064120 Cryz protein_coding protein_coding MGP_NODShiLtJ_T0064121.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178120364 178133839 + MGP_NODShiLtJ_P0064121 Cryz protein_coding protein_coding MGP_NODShiLtJ_T0064122.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178120389 178140967 + MGP_NODShiLtJ_P0064122 Cryz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064123.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178120519 178133721 + MGP_NODShiLtJ_P0064123 Cryz protein_coding protein_coding MGP_NODShiLtJ_T0064124.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178120618 178136133 + MGP_NODShiLtJ_P0064124 Cryz protein_coding protein_coding MGP_NODShiLtJ_T0064125.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178120654 178140867 + MGP_NODShiLtJ_P0064125 Cryz protein_coding protein_coding MGP_NODShiLtJ_T0064126.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178128850 178144539 + MGP_NODShiLtJ_P0064126 Cryz protein_coding protein_coding MGP_NODShiLtJ_T0064127.1 MGP_NODShiLtJ_G0027820.1 mouse_genomes_project 3 178138166 178141728 + Cryz protein_coding retained_intron MGP_NODShiLtJ_T0061767.1 MGP_NODShiLtJ_G0027288.1 mouse_genomes_project 3 103740639 103769958 + S100a3 protein_coding processed_transcript MGP_NODShiLtJ_T0061768.1 MGP_NODShiLtJ_G0027288.1 mouse_genomes_project 3 103769291 103788297 + MGP_NODShiLtJ_P0061768 S100a3 protein_coding protein_coding MGP_NODShiLtJ_T0061769.1 MGP_NODShiLtJ_G0027288.1 mouse_genomes_project 3 103771584 103788343 + MGP_NODShiLtJ_P0061769 S100a3 protein_coding protein_coding MGP_NODShiLtJ_T0061771.1 MGP_NODShiLtJ_G0027288.1 mouse_genomes_project 3 103786033 103788521 + MGP_NODShiLtJ_P0061771 S100a3 protein_coding protein_coding MGP_NODShiLtJ_T0061772.1 MGP_NODShiLtJ_G0027288.1 mouse_genomes_project 3 103786063 103788521 + S100a3 protein_coding retained_intron MGP_NODShiLtJ_T0062677.1 MGP_NODShiLtJ_G0027536.1 mouse_genomes_project 3 120936466 120953450 + MGP_NODShiLtJ_P0062677 Fam212b protein_coding protein_coding MGP_NODShiLtJ_T0062678.1 MGP_NODShiLtJ_G0027536.1 mouse_genomes_project 3 120937317 120950760 + MGP_NODShiLtJ_P0062678 Fam212b protein_coding protein_coding MGP_NODShiLtJ_T0001311.1 MGP_NODShiLtJ_G0001231.1 mouse_genomes_project 3 149147666 149150251 - TEC TEC MGP_NODShiLtJ_T0004147.1 MGP_NODShiLtJ_G0003650.1 mouse_genomes_project 3 5849671 5949050 + Gm16685 antisense antisense MGP_NODShiLtJ_T0014040.1 MGP_NODShiLtJ_G0012148.1 mouse_genomes_project 3 102858235 102858761 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004303.1 MGP_NODShiLtJ_G0003754.1 mouse_genomes_project 3 141150797 141184324 - Gm42836 antisense antisense MGP_NODShiLtJ_T0001326.1 MGP_NODShiLtJ_G0001246.1 mouse_genomes_project 3 153323855 153325627 - TEC TEC MGP_NODShiLtJ_T0017831.1 MGP_NODShiLtJ_G0015383.1 mouse_genomes_project 3 119907083 119928123 - Gm43584 processed_transcript processed_transcript MGP_NODShiLtJ_T0098327.1 MGP_NODShiLtJ_G0036732.1 mouse_genomes_project 3 115339276 115341397 - Gm42869 sense_intronic sense_intronic MGP_NODShiLtJ_T0059883.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23079663 23230877 + MGP_NODShiLtJ_P0059883 Tbl1xr1 protein_coding protein_coding MGP_NODShiLtJ_T0059884.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23079738 23227034 + MGP_NODShiLtJ_P0059884 Tbl1xr1 protein_coding protein_coding MGP_NODShiLtJ_T0059885.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23079767 23202127 + Tbl1xr1 protein_coding processed_transcript MGP_NODShiLtJ_T0059886.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23079843 23205144 + MGP_NODShiLtJ_P0059886 Tbl1xr1 protein_coding protein_coding MGP_NODShiLtJ_T0059887.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23079892 23203415 + Tbl1xr1 protein_coding processed_transcript MGP_NODShiLtJ_T0059888.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23079947 23202095 + MGP_NODShiLtJ_P0059888 Tbl1xr1 protein_coding protein_coding MGP_NODShiLtJ_T0059889.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23080295 23229576 + MGP_NODShiLtJ_P0059889 Tbl1xr1 protein_coding protein_coding MGP_NODShiLtJ_T0059890.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23121105 23226251 + MGP_NODShiLtJ_P0059890 Tbl1xr1 protein_coding protein_coding MGP_NODShiLtJ_T0059891.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23146390 23203408 + MGP_NODShiLtJ_P0059891 Tbl1xr1 protein_coding protein_coding MGP_NODShiLtJ_T0059892.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23156058 23227358 + MGP_NODShiLtJ_P0059892 Tbl1xr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059893.1 MGP_NODShiLtJ_G0026918.1 mouse_genomes_project 3 23217474 23224862 + MGP_NODShiLtJ_P0059893 Tbl1xr1 protein_coding protein_coding MGP_NODShiLtJ_T0063242.1 MGP_NODShiLtJ_G0027662.1 mouse_genomes_project 3 141887120 142056517 - MGP_NODShiLtJ_P0063242 Synpo2 protein_coding protein_coding MGP_NODShiLtJ_T0063243.1 MGP_NODShiLtJ_G0027662.1 mouse_genomes_project 3 141887120 141930420 - MGP_NODShiLtJ_P0063243 Synpo2 protein_coding protein_coding MGP_NODShiLtJ_T0063244.1 MGP_NODShiLtJ_G0027662.1 mouse_genomes_project 3 141887120 142056568 - MGP_NODShiLtJ_P0063244 Synpo2 protein_coding protein_coding MGP_NODShiLtJ_T0063245.1 MGP_NODShiLtJ_G0027662.1 mouse_genomes_project 3 141924212 142056568 - MGP_NODShiLtJ_P0063245 Synpo2 protein_coding protein_coding MGP_NODShiLtJ_T0063246.1 MGP_NODShiLtJ_G0027662.1 mouse_genomes_project 3 141926292 141930596 - MGP_NODShiLtJ_P0063246 Synpo2 protein_coding protein_coding MGP_NODShiLtJ_T0063247.1 MGP_NODShiLtJ_G0027662.1 mouse_genomes_project 3 141928566 141932285 - MGP_NODShiLtJ_P0063247 Synpo2 protein_coding protein_coding MGP_NODShiLtJ_T0063248.1 MGP_NODShiLtJ_G0027662.1 mouse_genomes_project 3 141993656 142056570 - Synpo2 protein_coding processed_transcript MGP_NODShiLtJ_T0063861.1 MGP_NODShiLtJ_G0027780.1 mouse_genomes_project 3 168191714 168198531 + MGP_NODShiLtJ_P0063861 2410004B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0063862.1 MGP_NODShiLtJ_G0027780.1 mouse_genomes_project 3 168191742 168198529 + MGP_NODShiLtJ_P0063862 2410004B18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063863.1 MGP_NODShiLtJ_G0027780.1 mouse_genomes_project 3 168191890 168197512 + MGP_NODShiLtJ_P0063863 2410004B18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063864.1 MGP_NODShiLtJ_G0027780.1 mouse_genomes_project 3 168191936 168192488 + 2410004B18Rik protein_coding retained_intron MGP_NODShiLtJ_T0063865.1 MGP_NODShiLtJ_G0027780.1 mouse_genomes_project 3 168191985 168197944 + MGP_NODShiLtJ_P0063865 2410004B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0063866.1 MGP_NODShiLtJ_G0027780.1 mouse_genomes_project 3 168192344 168197555 + 2410004B18Rik protein_coding retained_intron MGP_NODShiLtJ_T0063867.1 MGP_NODShiLtJ_G0027780.1 mouse_genomes_project 3 168192786 168197900 + MGP_NODShiLtJ_P0063867 2410004B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0062756.1 MGP_NODShiLtJ_G0027557.1 mouse_genomes_project 3 122571507 122579112 + MGP_NODShiLtJ_P0062756 Kcna2 protein_coding protein_coding MGP_NODShiLtJ_T0062757.1 MGP_NODShiLtJ_G0027557.1 mouse_genomes_project 3 122571928 122586476 + MGP_NODShiLtJ_P0062757 Kcna2 protein_coding protein_coding MGP_NODShiLtJ_T0062758.1 MGP_NODShiLtJ_G0027557.1 mouse_genomes_project 3 122573043 122576334 + MGP_NODShiLtJ_P0062758 Kcna2 protein_coding protein_coding MGP_NODShiLtJ_T0007725.1 MGP_NODShiLtJ_G0006309.1 mouse_genomes_project 3 181695055 181701275 - Gm33466 lincRNA lincRNA MGP_NODShiLtJ_T0001092.1 MGP_NODShiLtJ_G0001015.1 mouse_genomes_project 3 19826318 19827030 - TEC TEC MGP_NODShiLtJ_T0007622.1 MGP_NODShiLtJ_G0006228.1 mouse_genomes_project 3 140372620 140373438 - Gm43607 lincRNA lincRNA MGP_NODShiLtJ_T0010466.1 MGP_NODShiLtJ_G0008599.1 mouse_genomes_project 3 181516236 181516307 + Mir186 miRNA miRNA MGP_NODShiLtJ_T0014201.1 MGP_NODShiLtJ_G0012309.1 mouse_genomes_project 3 155783214 155783803 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004188.1 MGP_NODShiLtJ_G0003679.1 mouse_genomes_project 3 59892227 59899053 + Gm16206 antisense antisense MGP_NODShiLtJ_T0011430.1 MGP_NODShiLtJ_G0009563.1 mouse_genomes_project 3 81840569 81840660 + Gm27465 misc_RNA misc_RNA MGP_NODShiLtJ_T0013794.1 MGP_NODShiLtJ_G0011902.1 mouse_genomes_project 3 8515664 8518612 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062562.1 MGP_NODShiLtJ_G0027511.1 mouse_genomes_project 3 118671645 118673093 - MGP_NODShiLtJ_P0062562 protein_coding protein_coding MGP_NODShiLtJ_T0061273.1 MGP_NODShiLtJ_G0027209.1 mouse_genomes_project 3 101154599 101155614 - MGP_NODShiLtJ_P0061273 Bglap3 protein_coding protein_coding MGP_NODShiLtJ_T0062568.1 MGP_NODShiLtJ_G0027514.1 mouse_genomes_project 3 118775622 118827659 - MGP_NODShiLtJ_P0062568 Hipk1 protein_coding protein_coding MGP_NODShiLtJ_T0062569.1 MGP_NODShiLtJ_G0027514.1 mouse_genomes_project 3 118779369 118827153 - MGP_NODShiLtJ_P0062569 Hipk1 protein_coding protein_coding MGP_NODShiLtJ_T0062570.1 MGP_NODShiLtJ_G0027514.1 mouse_genomes_project 3 118779467 118827352 - MGP_NODShiLtJ_P0062570 Hipk1 protein_coding protein_coding MGP_NODShiLtJ_T0062571.1 MGP_NODShiLtJ_G0027514.1 mouse_genomes_project 3 118780963 118827657 - MGP_NODShiLtJ_P0062571 Hipk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062572.1 MGP_NODShiLtJ_G0027514.1 mouse_genomes_project 3 118783908 118786840 - Hipk1 protein_coding retained_intron MGP_NODShiLtJ_T0062573.1 MGP_NODShiLtJ_G0027514.1 mouse_genomes_project 3 118785157 118786789 - Hipk1 protein_coding retained_intron MGP_NODShiLtJ_T0062574.1 MGP_NODShiLtJ_G0027514.1 mouse_genomes_project 3 118789931 118827371 - Hipk1 protein_coding retained_intron MGP_NODShiLtJ_T0014017.1 MGP_NODShiLtJ_G0012125.1 mouse_genomes_project 3 92212608 92212926 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007669.1 MGP_NODShiLtJ_G0006268.1 mouse_genomes_project 3 164755897 164766353 + 9530052C20Rik lincRNA lincRNA MGP_NODShiLtJ_T0100438.1 MGP_NODShiLtJ_G0038832.1 mouse_genomes_project 3 29041950 29042064 + Gm25152 snoRNA snoRNA MGP_NODShiLtJ_T0062800.1 MGP_NODShiLtJ_G0027572.1 mouse_genomes_project 3 123264726 123284148 - MGP_NODShiLtJ_P0062800 Csf1 protein_coding protein_coding MGP_NODShiLtJ_T0062801.1 MGP_NODShiLtJ_G0027572.1 mouse_genomes_project 3 123264726 123283915 - MGP_NODShiLtJ_P0062801 Csf1 protein_coding protein_coding MGP_NODShiLtJ_T0062802.1 MGP_NODShiLtJ_G0027572.1 mouse_genomes_project 3 123266692 123274658 - MGP_NODShiLtJ_P0062802 Csf1 protein_coding protein_coding MGP_NODShiLtJ_T0062803.1 MGP_NODShiLtJ_G0027572.1 mouse_genomes_project 3 123269273 123283921 - MGP_NODShiLtJ_P0062803 Csf1 protein_coding protein_coding MGP_NODShiLtJ_T0062804.1 MGP_NODShiLtJ_G0027572.1 mouse_genomes_project 3 123271411 123283921 - Csf1 protein_coding retained_intron MGP_NODShiLtJ_T0062805.1 MGP_NODShiLtJ_G0027572.1 mouse_genomes_project 3 123272220 123274420 - MGP_NODShiLtJ_P0062805 Csf1 protein_coding protein_coding MGP_NODShiLtJ_T0062806.1 MGP_NODShiLtJ_G0027572.1 mouse_genomes_project 3 123274058 123283900 - MGP_NODShiLtJ_P0062806 Csf1 protein_coding protein_coding MGP_NODShiLtJ_T0007608.1 MGP_NODShiLtJ_G0006219.1 mouse_genomes_project 3 134305436 134310013 + Gm26530 lincRNA lincRNA MGP_NODShiLtJ_T0063970.1 MGP_NODShiLtJ_G0027800.1 mouse_genomes_project 3 175013348 175017504 - MGP_NODShiLtJ_P0063970 Ifi44l protein_coding protein_coding MGP_NODShiLtJ_T0062909.1 MGP_NODShiLtJ_G0027597.1 mouse_genomes_project 3 124168055 124174092 - MGP_NODShiLtJ_P0062909 protein_coding protein_coding MGP_NODShiLtJ_T0062910.1 MGP_NODShiLtJ_G0027597.1 mouse_genomes_project 3 124168055 124173796 - MGP_NODShiLtJ_P0062910 protein_coding protein_coding MGP_NODShiLtJ_T0014241.1 MGP_NODShiLtJ_G0012349.1 mouse_genomes_project 3 169152113 169152792 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014119.1 MGP_NODShiLtJ_G0012227.1 mouse_genomes_project 3 123579709 123580153 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060244.1 MGP_NODShiLtJ_G0026980.1 mouse_genomes_project 3 40158364 40170609 - MGP_NODShiLtJ_P0060244 Il21 protein_coding protein_coding MGP_NODShiLtJ_T0060245.1 MGP_NODShiLtJ_G0026980.1 mouse_genomes_project 3 40162243 40170556 - MGP_NODShiLtJ_P0060245 Il21 protein_coding protein_coding MGP_NODShiLtJ_T0060246.1 MGP_NODShiLtJ_G0026980.1 mouse_genomes_project 3 40167124 40170627 - Il21 protein_coding retained_intron MGP_NODShiLtJ_T0062876.1 MGP_NODShiLtJ_G0027591.1 mouse_genomes_project 3 123948956 123965244 + MGP_NODShiLtJ_P0062876 Mybphl protein_coding protein_coding MGP_NODShiLtJ_T0100500.1 MGP_NODShiLtJ_G0038894.1 mouse_genomes_project 3 166585855 166585983 - Gm24406 snoRNA snoRNA MGP_NODShiLtJ_T0014054.1 MGP_NODShiLtJ_G0012162.1 mouse_genomes_project 3 106933062 106936407 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061878.1 MGP_NODShiLtJ_G0027365.1 mouse_genomes_project 3 108261033 108286175 + MGP_NODShiLtJ_P0061878 Rorc protein_coding protein_coding MGP_NODShiLtJ_T0061879.1 MGP_NODShiLtJ_G0027365.1 mouse_genomes_project 3 108265661 108286611 + MGP_NODShiLtJ_P0061879 Rorc protein_coding protein_coding MGP_NODShiLtJ_T0061880.1 MGP_NODShiLtJ_G0027365.1 mouse_genomes_project 3 108265689 108285981 + Rorc protein_coding retained_intron MGP_NODShiLtJ_T0061881.1 MGP_NODShiLtJ_G0027365.1 mouse_genomes_project 3 108265745 108285983 + MGP_NODShiLtJ_P0061881 Rorc protein_coding protein_coding MGP_NODShiLtJ_T0063555.1 MGP_NODShiLtJ_G0027717.1 mouse_genomes_project 3 155952104 155976130 + MGP_NODShiLtJ_P0063555 Bdh2 protein_coding protein_coding MGP_NODShiLtJ_T0063556.1 MGP_NODShiLtJ_G0027717.1 mouse_genomes_project 3 155952144 155976130 + MGP_NODShiLtJ_P0063556 Bdh2 protein_coding protein_coding MGP_NODShiLtJ_T0063557.1 MGP_NODShiLtJ_G0027717.1 mouse_genomes_project 3 155952166 155955300 + Bdh2 protein_coding retained_intron MGP_NODShiLtJ_T0063558.1 MGP_NODShiLtJ_G0027717.1 mouse_genomes_project 3 155959467 155976127 + Bdh2 protein_coding processed_transcript MGP_NODShiLtJ_T0098318.1 MGP_NODShiLtJ_G0036723.1 mouse_genomes_project 3 108301591 108306477 + Gm42463 sense_intronic sense_intronic MGP_NODShiLtJ_T0062240.1 MGP_NODShiLtJ_G0027426.1 mouse_genomes_project 3 110348813 110350715 - MGP_NODShiLtJ_P0062240 Bola1 protein_coding protein_coding MGP_NODShiLtJ_T0062241.1 MGP_NODShiLtJ_G0027426.1 mouse_genomes_project 3 110348813 110349812 - MGP_NODShiLtJ_P0062241 Bola1 protein_coding protein_coding MGP_NODShiLtJ_T0062242.1 MGP_NODShiLtJ_G0027426.1 mouse_genomes_project 3 110349088 110367184 - MGP_NODShiLtJ_P0062242 Bola1 protein_coding protein_coding MGP_NODShiLtJ_T0011437.1 MGP_NODShiLtJ_G0009570.1 mouse_genomes_project 3 115468359 115468621 - Gm23465 misc_RNA misc_RNA MGP_NODShiLtJ_T0060377.1 MGP_NODShiLtJ_G0027001.1 mouse_genomes_project 3 49969592 49974229 + MGP_NODShiLtJ_P0060377 Pcdh10 protein_coding protein_coding MGP_NODShiLtJ_T0060378.1 MGP_NODShiLtJ_G0027001.1 mouse_genomes_project 3 49969600 49998482 + MGP_NODShiLtJ_P0060378 Pcdh10 protein_coding protein_coding MGP_NODShiLtJ_T0060379.1 MGP_NODShiLtJ_G0027001.1 mouse_genomes_project 3 49969619 50040274 + MGP_NODShiLtJ_P0060379 Pcdh10 protein_coding protein_coding MGP_NODShiLtJ_T0060380.1 MGP_NODShiLtJ_G0027001.1 mouse_genomes_project 3 49969621 50026355 + MGP_NODShiLtJ_P0060380 Pcdh10 protein_coding protein_coding MGP_NODShiLtJ_T0060381.1 MGP_NODShiLtJ_G0027001.1 mouse_genomes_project 3 49973826 50037144 + Pcdh10 protein_coding processed_transcript MGP_NODShiLtJ_T0001210.1 MGP_NODShiLtJ_G0001131.1 mouse_genomes_project 3 76957581 76964469 + TEC TEC MGP_NODShiLtJ_T0063741.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 163957527 164148794 - MGP_NODShiLtJ_P0063741 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063742.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 163960612 164133141 - MGP_NODShiLtJ_P0063742 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063743.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 163960612 164148679 - MGP_NODShiLtJ_P0063743 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063744.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 163960612 164133141 - MGP_NODShiLtJ_P0063744 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063745.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 163960612 164133141 - MGP_NODShiLtJ_P0063745 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063746.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 163962393 163965564 - Pdlim5 protein_coding retained_intron MGP_NODShiLtJ_T0063747.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 163969093 164028758 - MGP_NODShiLtJ_P0063747 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063748.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 163969152 164029221 - MGP_NODShiLtJ_P0063748 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063749.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 164026838 164133183 - MGP_NODShiLtJ_P0063749 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063750.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 164027073 164148708 - MGP_NODShiLtJ_P0063750 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063751.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 164027078 164133183 - MGP_NODShiLtJ_P0063751 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063752.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 164027999 164148719 - MGP_NODShiLtJ_P0063752 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0063753.1 MGP_NODShiLtJ_G0027754.1 mouse_genomes_project 3 164028106 164148797 - MGP_NODShiLtJ_P0063753 Pdlim5 protein_coding protein_coding MGP_NODShiLtJ_T0011422.1 MGP_NODShiLtJ_G0009555.1 mouse_genomes_project 3 20033870 20034182 + Gm22282 misc_RNA misc_RNA MGP_NODShiLtJ_T0007453.1 MGP_NODShiLtJ_G0006104.1 mouse_genomes_project 3 41487749 41505218 - Gm43536 lincRNA lincRNA MGP_NODShiLtJ_T0007454.1 MGP_NODShiLtJ_G0006104.1 mouse_genomes_project 3 41489224 41505220 - Gm43536 lincRNA lincRNA MGP_NODShiLtJ_T0007455.1 MGP_NODShiLtJ_G0006104.1 mouse_genomes_project 3 41490879 41505460 - Gm43536 lincRNA lincRNA MGP_NODShiLtJ_T0061255.1 MGP_NODShiLtJ_G0027205.1 mouse_genomes_project 3 101094502 101100040 - MGP_NODShiLtJ_P0061255 Tmem79 protein_coding protein_coding MGP_NODShiLtJ_T0061256.1 MGP_NODShiLtJ_G0027205.1 mouse_genomes_project 3 101094893 101099804 - MGP_NODShiLtJ_P0061256 Tmem79 protein_coding protein_coding MGP_NODShiLtJ_T0061257.1 MGP_NODShiLtJ_G0027205.1 mouse_genomes_project 3 101094894 101099990 - MGP_NODShiLtJ_P0061257 Tmem79 protein_coding protein_coding MGP_NODShiLtJ_T0061258.1 MGP_NODShiLtJ_G0027205.1 mouse_genomes_project 3 101098673 101101674 - MGP_NODShiLtJ_P0061258 Tmem79 protein_coding protein_coding MGP_NODShiLtJ_T0063273.1 MGP_NODShiLtJ_G0027668.1 mouse_genomes_project 3 143367322 143392769 - MGP_NODShiLtJ_P0063273 1700006A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0063274.1 MGP_NODShiLtJ_G0027668.1 mouse_genomes_project 3 143367557 143392720 - MGP_NODShiLtJ_P0063274 1700006A11Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007410.1 MGP_NODShiLtJ_G0006065.1 mouse_genomes_project 3 18895640 19025694 - lincRNA lincRNA MGP_NODShiLtJ_T0061774.1 MGP_NODShiLtJ_G0027291.1 mouse_genomes_project 3 103789589 103791872 + MGP_NODShiLtJ_P0061774 S100a4 protein_coding protein_coding MGP_NODShiLtJ_T0061775.1 MGP_NODShiLtJ_G0027291.1 mouse_genomes_project 3 103790737 103791660 + MGP_NODShiLtJ_P0061775 S100a4 protein_coding protein_coding MGP_NODShiLtJ_T0061809.1 MGP_NODShiLtJ_G0027314.1 mouse_genomes_project 3 105967957 105969099 - MGP_NODShiLtJ_P0061809 protein_coding protein_coding MGP_NODShiLtJ_T0014115.1 MGP_NODShiLtJ_G0012223.1 mouse_genomes_project 3 123399212 123399823 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062594.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118898385 118967688 + MGP_NODShiLtJ_P0062594 Ptpn22 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062595.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118900232 118967675 + MGP_NODShiLtJ_P0062595 Ptpn22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062596.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118900714 118967678 + MGP_NODShiLtJ_P0062596 Ptpn22 protein_coding protein_coding MGP_NODShiLtJ_T0062597.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118900992 118922011 + Ptpn22 protein_coding processed_transcript MGP_NODShiLtJ_T0062598.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118923314 118926337 + Ptpn22 protein_coding retained_intron MGP_NODShiLtJ_T0062599.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118937647 118939754 + Ptpn22 protein_coding retained_intron MGP_NODShiLtJ_T0062600.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118937737 118958783 + Ptpn22 protein_coding processed_transcript MGP_NODShiLtJ_T0062601.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118940320 118964889 + Ptpn22 protein_coding retained_intron MGP_NODShiLtJ_T0062602.1 MGP_NODShiLtJ_G0027519.1 mouse_genomes_project 3 118957438 118967677 + Ptpn22 protein_coding retained_intron MGP_NODShiLtJ_T0007474.1 MGP_NODShiLtJ_G0006116.1 mouse_genomes_project 3 57320896 57337875 - Gm29230 lincRNA lincRNA MGP_NODShiLtJ_T0001213.1 MGP_NODShiLtJ_G0001134.1 mouse_genomes_project 3 83050163 83052296 + TEC TEC MGP_NODShiLtJ_T0101884.1 MGP_NODShiLtJ_G0040052.1 mouse_genomes_project 3 108155824 108156016 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0060657.1 MGP_NODShiLtJ_G0027063.1 mouse_genomes_project 3 67287710 67308531 + Aadac protein_coding processed_transcript MGP_NODShiLtJ_T0060658.1 MGP_NODShiLtJ_G0027063.1 mouse_genomes_project 3 67293896 67310187 + MGP_NODShiLtJ_P0060658 Aadac protein_coding protein_coding MGP_NODShiLtJ_T0060659.1 MGP_NODShiLtJ_G0027063.1 mouse_genomes_project 3 67294011 67304603 + Aadac protein_coding retained_intron MGP_NODShiLtJ_T0060280.1 MGP_NODShiLtJ_G0026986.1 mouse_genomes_project 3 40633461 40638135 + MGP_NODShiLtJ_P0060280 Spry1 protein_coding protein_coding MGP_NODShiLtJ_T0060281.1 MGP_NODShiLtJ_G0026986.1 mouse_genomes_project 3 40633472 40638135 + MGP_NODShiLtJ_P0060281 Spry1 protein_coding protein_coding MGP_NODShiLtJ_T0060282.1 MGP_NODShiLtJ_G0026986.1 mouse_genomes_project 3 40633594 40638135 + MGP_NODShiLtJ_P0060282 Spry1 protein_coding protein_coding MGP_NODShiLtJ_T0099233.1 MGP_NODShiLtJ_G0037627.1 mouse_genomes_project 3 168701025 168701128 - Gm22078 snRNA snRNA MGP_NODShiLtJ_T0061161.1 MGP_NODShiLtJ_G0027184.1 mouse_genomes_project 3 100496777 100517274 + MGP_NODShiLtJ_P0061161 Insrr protein_coding protein_coding MGP_NODShiLtJ_T0061162.1 MGP_NODShiLtJ_G0027184.1 mouse_genomes_project 3 100496791 100506303 + Insrr protein_coding retained_intron MGP_NODShiLtJ_T0061163.1 MGP_NODShiLtJ_G0027184.1 mouse_genomes_project 3 100496920 100517225 + MGP_NODShiLtJ_P0061163 Insrr protein_coding protein_coding MGP_NODShiLtJ_T0061164.1 MGP_NODShiLtJ_G0027184.1 mouse_genomes_project 3 100503160 100504026 + Insrr protein_coding processed_transcript MGP_NODShiLtJ_T0099169.1 MGP_NODShiLtJ_G0037563.1 mouse_genomes_project 3 61989033 61989140 + Gm25132 snRNA snRNA MGP_NODShiLtJ_T0010406.1 MGP_NODShiLtJ_G0008539.1 mouse_genomes_project 3 37631937 37632044 - Mir6378 miRNA miRNA MGP_NODShiLtJ_T0062755.1 MGP_NODShiLtJ_G0027556.1 mouse_genomes_project 3 122488395 122490297 + MGP_NODShiLtJ_P0062755 Kcna3 protein_coding protein_coding MGP_NODShiLtJ_T0007611.1 MGP_NODShiLtJ_G0006222.1 mouse_genomes_project 3 135211192 135211881 + Gm42891 lincRNA lincRNA MGP_NODShiLtJ_T0099236.1 MGP_NODShiLtJ_G0037630.1 mouse_genomes_project 3 179484952 179485056 - Gm23038 snRNA snRNA MGP_NODShiLtJ_T0013923.1 MGP_NODShiLtJ_G0012031.1 mouse_genomes_project 3 57944286 57944719 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013984.1 MGP_NODShiLtJ_G0012092.1 mouse_genomes_project 3 78373309 78373815 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098328.1 MGP_NODShiLtJ_G0036733.1 mouse_genomes_project 3 115341671 115345097 - Gm43462 sense_intronic sense_intronic MGP_NODShiLtJ_T0059998.1 MGP_NODShiLtJ_G0026937.1 mouse_genomes_project 3 32954044 32979422 - MGP_NODShiLtJ_P0059998 Lrrc34 protein_coding protein_coding MGP_NODShiLtJ_T0060562.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62311770 62960437 - MGP_NODShiLtJ_P0060562 Nbea protein_coding protein_coding MGP_NODShiLtJ_T0060563.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62311774 62383885 - Nbea protein_coding processed_transcript MGP_NODShiLtJ_T0060564.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62313095 62492021 - Nbea protein_coding processed_transcript MGP_NODShiLtJ_T0060565.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62389342 62418545 - Nbea protein_coding retained_intron MGP_NODShiLtJ_T0060566.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62480404 62493064 - Nbea protein_coding retained_intron MGP_NODShiLtJ_T0060567.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62481317 62485177 - Nbea protein_coding retained_intron MGP_NODShiLtJ_T0060569.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62692246 62699293 - Nbea protein_coding retained_intron MGP_NODShiLtJ_T0060570.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62746383 62749634 - Nbea protein_coding retained_intron MGP_NODShiLtJ_T0060571.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62765019 62769441 - Nbea protein_coding retained_intron MGP_NODShiLtJ_T0060572.1 MGP_NODShiLtJ_G0027037.1 mouse_genomes_project 3 62776011 62785339 - Nbea protein_coding retained_intron MGP_NODShiLtJ_T0100488.1 MGP_NODShiLtJ_G0038882.1 mouse_genomes_project 3 134273014 134273111 + Gm26358 snoRNA snoRNA MGP_NODShiLtJ_T0060950.1 MGP_NODShiLtJ_G0027134.1 mouse_genomes_project 3 92564922 92709190 - MGP_NODShiLtJ_P0060950 Gria2 protein_coding protein_coding MGP_NODShiLtJ_T0060951.1 MGP_NODShiLtJ_G0027134.1 mouse_genomes_project 3 92572213 92709190 - MGP_NODShiLtJ_P0060951 Gria2 protein_coding protein_coding MGP_NODShiLtJ_T0060952.1 MGP_NODShiLtJ_G0027134.1 mouse_genomes_project 3 92572458 92708934 - MGP_NODShiLtJ_P0060952 Gria2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060953.1 MGP_NODShiLtJ_G0027134.1 mouse_genomes_project 3 92577876 92709146 - Gria2 protein_coding retained_intron MGP_NODShiLtJ_T0060954.1 MGP_NODShiLtJ_G0027134.1 mouse_genomes_project 3 92592621 92709005 - Gria2 protein_coding retained_intron MGP_NODShiLtJ_T0060955.1 MGP_NODShiLtJ_G0027134.1 mouse_genomes_project 3 92594623 92709079 - Gria2 protein_coding retained_intron MGP_NODShiLtJ_T0060956.1 MGP_NODShiLtJ_G0027134.1 mouse_genomes_project 3 92595863 92709135 - Gria2 protein_coding retained_intron MGP_NODShiLtJ_T0060957.1 MGP_NODShiLtJ_G0027134.1 mouse_genomes_project 3 92706400 92709048 - Gria2 protein_coding retained_intron MGP_NODShiLtJ_T0098372.1 MGP_NODShiLtJ_G0036777.1 mouse_genomes_project 3 166158541 166160618 - Gm43445 sense_intronic sense_intronic MGP_NODShiLtJ_T0001273.1 MGP_NODShiLtJ_G0001194.1 mouse_genomes_project 3 140382593 140384421 - TEC TEC MGP_NODShiLtJ_T0098356.1 MGP_NODShiLtJ_G0036761.1 mouse_genomes_project 3 119594581 119600641 - Gm43696 sense_intronic sense_intronic MGP_NODShiLtJ_T0101859.1 MGP_NODShiLtJ_G0040027.1 mouse_genomes_project 3 72005784 72008421 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0064075.1 MGP_NODShiLtJ_G0027814.1 mouse_genomes_project 3 177308364 177363597 - MGP_NODShiLtJ_P0064075 Msh4 protein_coding protein_coding MGP_NODShiLtJ_T0064076.1 MGP_NODShiLtJ_G0027814.1 mouse_genomes_project 3 177308484 177331454 - Msh4 protein_coding retained_intron MGP_NODShiLtJ_T0064077.1 MGP_NODShiLtJ_G0027814.1 mouse_genomes_project 3 177308484 177336889 - Msh4 protein_coding retained_intron MGP_NODShiLtJ_T0064078.1 MGP_NODShiLtJ_G0027814.1 mouse_genomes_project 3 177308484 177317275 - Msh4 protein_coding processed_transcript MGP_NODShiLtJ_T0064079.1 MGP_NODShiLtJ_G0027814.1 mouse_genomes_project 3 177308484 177336889 - Msh4 protein_coding retained_intron MGP_NODShiLtJ_T0064080.1 MGP_NODShiLtJ_G0027814.1 mouse_genomes_project 3 177308484 177317301 - Msh4 protein_coding retained_intron MGP_NODShiLtJ_T0064081.1 MGP_NODShiLtJ_G0027814.1 mouse_genomes_project 3 177308484 177362190 - MGP_NODShiLtJ_P0064081 Msh4 protein_coding protein_coding MGP_NODShiLtJ_T0064082.1 MGP_NODShiLtJ_G0027814.1 mouse_genomes_project 3 177308488 177362350 - MGP_NODShiLtJ_P0064082 Msh4 protein_coding protein_coding MGP_NODShiLtJ_T0062203.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110060973 110079701 + MGP_NODShiLtJ_P0062203 Anp32e protein_coding protein_coding MGP_NODShiLtJ_T0062204.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110060978 110079771 + MGP_NODShiLtJ_P0062204 Anp32e protein_coding protein_coding MGP_NODShiLtJ_T0062205.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110061020 110079578 + MGP_NODShiLtJ_P0062205 Anp32e protein_coding protein_coding MGP_NODShiLtJ_T0062206.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110061081 110081405 + MGP_NODShiLtJ_P0062206 Anp32e protein_coding protein_coding MGP_NODShiLtJ_T0062207.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110061236 110079683 + MGP_NODShiLtJ_P0062207 Anp32e protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062208.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110061277 110079454 + MGP_NODShiLtJ_P0062208 Anp32e protein_coding protein_coding MGP_NODShiLtJ_T0062209.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110061292 110081527 + MGP_NODShiLtJ_P0062209 Anp32e protein_coding protein_coding MGP_NODShiLtJ_T0062210.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110062231 110070206 + MGP_NODShiLtJ_P0062210 Anp32e protein_coding protein_coding MGP_NODShiLtJ_T0062211.1 MGP_NODShiLtJ_G0027419.1 mouse_genomes_project 3 110078355 110079659 + Anp32e protein_coding retained_intron MGP_NODShiLtJ_T0063291.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146160645 146261881 + Camk2d protein_coding processed_transcript MGP_NODShiLtJ_T0063292.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161294 146443536 + MGP_NODShiLtJ_P0063292 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063293.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161303 146443534 + MGP_NODShiLtJ_P0063293 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063294.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161341 146443538 + MGP_NODShiLtJ_P0063294 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063295.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161348 146416556 + MGP_NODShiLtJ_P0063295 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063296.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161350 146444949 + MGP_NODShiLtJ_P0063296 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063297.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161352 146367533 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063298.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161353 146439085 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063299.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161353 146410311 + MGP_NODShiLtJ_P0063299 Camk2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063300.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161363 146441333 + MGP_NODShiLtJ_P0063300 Camk2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063301.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161378 146442453 + Camk2d protein_coding processed_transcript MGP_NODShiLtJ_T0063302.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161440 146442326 + MGP_NODShiLtJ_P0063302 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063303.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161549 146444918 + MGP_NODShiLtJ_P0063303 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063304.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161651 146441841 + MGP_NODShiLtJ_P0063304 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063305.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161684 146262585 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063306.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161742 146442307 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063307.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146161757 146442950 + MGP_NODShiLtJ_P0063307 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063308.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146376568 146383177 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063309.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146377141 146409089 + Camk2d protein_coding processed_transcript MGP_NODShiLtJ_T0063310.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146382418 146406926 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063311.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146393752 146438884 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063312.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146396625 146442636 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063313.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146400117 146440171 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063314.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146400117 146440171 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063315.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146401353 146441797 + MGP_NODShiLtJ_P0063315 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063316.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146402939 146405308 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0063317.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146404275 146441516 + MGP_NODShiLtJ_P0063317 Camk2d protein_coding protein_coding MGP_NODShiLtJ_T0063318.1 MGP_NODShiLtJ_G0027673.1 mouse_genomes_project 3 146405575 146408690 + Camk2d protein_coding retained_intron MGP_NODShiLtJ_T0099190.1 MGP_NODShiLtJ_G0037584.1 mouse_genomes_project 3 98874356 98874525 + Gm23850 snRNA snRNA MGP_NODShiLtJ_T0061790.1 MGP_NODShiLtJ_G0027298.1 mouse_genomes_project 3 103987198 103989129 - MGP_NODShiLtJ_P0061790 Gm5849 protein_coding protein_coding MGP_NODShiLtJ_T0014193.1 MGP_NODShiLtJ_G0012301.1 mouse_genomes_project 3 153292304 153292733 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062773.1 MGP_NODShiLtJ_G0027565.1 mouse_genomes_project 3 122954800 122976045 - MGP_NODShiLtJ_P0062773 Kcnc4 protein_coding protein_coding MGP_NODShiLtJ_T0061578.1 MGP_NODShiLtJ_G0027259.1 mouse_genomes_project 3 102736083 102737750 + Adar protein_coding retained_intron MGP_NODShiLtJ_T0061579.1 MGP_NODShiLtJ_G0027259.1 mouse_genomes_project 3 102736393 102756506 + Adar protein_coding processed_transcript MGP_NODShiLtJ_T0061580.1 MGP_NODShiLtJ_G0027259.1 mouse_genomes_project 3 102752001 102773647 + MGP_NODShiLtJ_P0061580 Adar protein_coding protein_coding MGP_NODShiLtJ_T0061581.1 MGP_NODShiLtJ_G0027259.1 mouse_genomes_project 3 102752001 102773647 + MGP_NODShiLtJ_P0061581 Adar protein_coding protein_coding MGP_NODShiLtJ_T0061582.1 MGP_NODShiLtJ_G0027259.1 mouse_genomes_project 3 102752001 102773647 + MGP_NODShiLtJ_P0061582 Adar protein_coding protein_coding MGP_NODShiLtJ_T0061583.1 MGP_NODShiLtJ_G0027259.1 mouse_genomes_project 3 102752064 102773416 + MGP_NODShiLtJ_P0061583 Adar protein_coding protein_coding MGP_NODShiLtJ_T0061584.1 MGP_NODShiLtJ_G0027259.1 mouse_genomes_project 3 102758938 102760642 + Adar protein_coding retained_intron MGP_NODShiLtJ_T0061585.1 MGP_NODShiLtJ_G0027259.1 mouse_genomes_project 3 102767949 102769516 + Adar protein_coding retained_intron MGP_NODShiLtJ_T0061821.1 MGP_NODShiLtJ_G0027325.1 mouse_genomes_project 3 106214952 106216507 - MGP_NODShiLtJ_P0061821 Lce6a protein_coding protein_coding MGP_NODShiLtJ_T0061822.1 MGP_NODShiLtJ_G0027325.1 mouse_genomes_project 3 106214956 106216027 - MGP_NODShiLtJ_P0061822 Lce6a protein_coding protein_coding MGP_NODShiLtJ_T0010404.1 MGP_NODShiLtJ_G0008537.1 mouse_genomes_project 3 35774295 35774400 - Gm27974 miRNA miRNA MGP_NODShiLtJ_T0007555.1 MGP_NODShiLtJ_G0006173.1 mouse_genomes_project 3 105586256 105588537 + Gm43736 lincRNA lincRNA MGP_NODShiLtJ_T0098335.1 MGP_NODShiLtJ_G0036740.1 mouse_genomes_project 3 116975654 116976935 + Gm43244 sense_intronic sense_intronic MGP_NODShiLtJ_T0062326.1 MGP_NODShiLtJ_G0027453.1 mouse_genomes_project 3 111164233 111350591 + MGP_NODShiLtJ_P0062326 Gja5 protein_coding protein_coding MGP_NODShiLtJ_T0062328.1 MGP_NODShiLtJ_G0027453.1 mouse_genomes_project 3 111301494 111319907 + MGP_NODShiLtJ_P0062328 Gja5 protein_coding protein_coding MGP_NODShiLtJ_T0062329.1 MGP_NODShiLtJ_G0027453.1 mouse_genomes_project 3 111301494 111322660 + MGP_NODShiLtJ_P0062329 Gja5 protein_coding protein_coding MGP_NODShiLtJ_T0007678.1 MGP_NODShiLtJ_G0006276.1 mouse_genomes_project 3 165503445 165516831 + Gm33651 lincRNA lincRNA MGP_NODShiLtJ_T0060472.1 MGP_NODShiLtJ_G0027021.1 mouse_genomes_project 3 60352119 60371126 - MGP_NODShiLtJ_P0060472 Ufm1 protein_coding protein_coding MGP_NODShiLtJ_T0060473.1 MGP_NODShiLtJ_G0027021.1 mouse_genomes_project 3 60365662 60370618 - MGP_NODShiLtJ_P0060473 Ufm1 protein_coding protein_coding MGP_NODShiLtJ_T0060474.1 MGP_NODShiLtJ_G0027021.1 mouse_genomes_project 3 60366467 60370614 - Ufm1 protein_coding retained_intron MGP_NODShiLtJ_T0013826.1 MGP_NODShiLtJ_G0011934.1 mouse_genomes_project 3 19151293 19152494 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007633.1 MGP_NODShiLtJ_G0006237.1 mouse_genomes_project 3 148432230 148772670 + lincRNA lincRNA MGP_NODShiLtJ_T0001314.1 MGP_NODShiLtJ_G0001234.1 mouse_genomes_project 3 149504637 149506308 + TEC TEC MGP_NODShiLtJ_T0060293.1 MGP_NODShiLtJ_G0026991.1 mouse_genomes_project 3 43873726 43891875 + MGP_NODShiLtJ_P0060293 Slc25a31 protein_coding protein_coding MGP_NODShiLtJ_T0063668.1 MGP_NODShiLtJ_G0027738.1 mouse_genomes_project 3 159060539 159101238 - MGP_NODShiLtJ_P0063668 Mttp protein_coding protein_coding MGP_NODShiLtJ_T0063669.1 MGP_NODShiLtJ_G0027738.1 mouse_genomes_project 3 159060554 159114715 - MGP_NODShiLtJ_P0063669 Mttp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063670.1 MGP_NODShiLtJ_G0027738.1 mouse_genomes_project 3 159061732 159114671 - MGP_NODShiLtJ_P0063670 Mttp protein_coding protein_coding MGP_NODShiLtJ_T0063671.1 MGP_NODShiLtJ_G0027738.1 mouse_genomes_project 3 159113545 159116126 - Mttp protein_coding retained_intron MGP_NODShiLtJ_T0062114.1 MGP_NODShiLtJ_G0027404.1 mouse_genomes_project 3 109582130 109619555 + MGP_NODShiLtJ_P0062114 Ctss protein_coding protein_coding MGP_NODShiLtJ_T0062115.1 MGP_NODShiLtJ_G0027404.1 mouse_genomes_project 3 109582238 109619561 + MGP_NODShiLtJ_P0062115 Ctss protein_coding protein_coding MGP_NODShiLtJ_T0101130.1 MGP_NODShiLtJ_G0039466.1 mouse_genomes_project 3 164771718 164772387 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0014171.1 MGP_NODShiLtJ_G0012279.1 mouse_genomes_project 3 142862907 142863915 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059812.1 MGP_NODShiLtJ_G0026904.1 mouse_genomes_project 3 19813843 19847104 - MGP_NODShiLtJ_P0059812 Armc1 protein_coding protein_coding MGP_NODShiLtJ_T0063350.1 MGP_NODShiLtJ_G0027677.1 mouse_genomes_project 3 147216756 147293459 + MGP_NODShiLtJ_P0063350 Zgrf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063351.1 MGP_NODShiLtJ_G0027677.1 mouse_genomes_project 3 147216756 147293464 + MGP_NODShiLtJ_P0063351 Zgrf1 protein_coding protein_coding MGP_NODShiLtJ_T0063352.1 MGP_NODShiLtJ_G0027677.1 mouse_genomes_project 3 147216769 147292576 + MGP_NODShiLtJ_P0063352 Zgrf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063353.1 MGP_NODShiLtJ_G0027677.1 mouse_genomes_project 3 147216769 147293466 + MGP_NODShiLtJ_P0063353 Zgrf1 protein_coding protein_coding MGP_NODShiLtJ_T0063354.1 MGP_NODShiLtJ_G0027677.1 mouse_genomes_project 3 147216900 147228048 + MGP_NODShiLtJ_P0063354 Zgrf1 protein_coding protein_coding MGP_NODShiLtJ_T0063355.1 MGP_NODShiLtJ_G0027677.1 mouse_genomes_project 3 147253275 147292428 + MGP_NODShiLtJ_P0063355 Zgrf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063356.1 MGP_NODShiLtJ_G0027677.1 mouse_genomes_project 3 147264195 147272219 + Zgrf1 protein_coding retained_intron MGP_NODShiLtJ_T0011425.1 MGP_NODShiLtJ_G0009558.1 mouse_genomes_project 3 37193842 37194056 + Gm27403 misc_RNA misc_RNA MGP_NODShiLtJ_T0060216.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39729275 39773385 + protein_coding retained_intron MGP_NODShiLtJ_T0060217.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39729277 39976982 + MGP_NODShiLtJ_P0060217 protein_coding protein_coding MGP_NODShiLtJ_T0060218.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39729292 39770232 + protein_coding retained_intron MGP_NODShiLtJ_T0060219.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39729292 39840213 + protein_coding retained_intron MGP_NODShiLtJ_T0060220.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39729313 39976490 + MGP_NODShiLtJ_P0060220 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060221.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39729327 39844981 + MGP_NODShiLtJ_P0060221 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060222.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39730640 39826238 + protein_coding retained_intron MGP_NODShiLtJ_T0060223.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39738531 39976982 + MGP_NODShiLtJ_P0060223 protein_coding protein_coding MGP_NODShiLtJ_T0060224.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39738544 39770239 + protein_coding retained_intron MGP_NODShiLtJ_T0060225.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39773862 39778510 + protein_coding retained_intron MGP_NODShiLtJ_T0060226.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39778419 39844983 + MGP_NODShiLtJ_P0060226 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060227.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39790568 39805376 + protein_coding retained_intron MGP_NODShiLtJ_T0060228.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39843049 39844978 + protein_coding retained_intron MGP_NODShiLtJ_T0060229.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39924291 39976964 + MGP_NODShiLtJ_P0060229 protein_coding protein_coding MGP_NODShiLtJ_T0060230.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39928694 39976965 + MGP_NODShiLtJ_P0060230 protein_coding protein_coding MGP_NODShiLtJ_T0060231.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39928825 39976963 + MGP_NODShiLtJ_P0060231 protein_coding protein_coding MGP_NODShiLtJ_T0060232.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39931625 39948834 + MGP_NODShiLtJ_P0060232 protein_coding protein_coding MGP_NODShiLtJ_T0060233.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39935948 39941897 + protein_coding retained_intron MGP_NODShiLtJ_T0060234.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39937271 39942127 + protein_coding retained_intron MGP_NODShiLtJ_T0060235.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39942469 39960414 + protein_coding retained_intron MGP_NODShiLtJ_T0060236.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39960396 39963491 + protein_coding retained_intron MGP_NODShiLtJ_T0060237.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39961093 39963493 + protein_coding retained_intron MGP_NODShiLtJ_T0060238.1 MGP_NODShiLtJ_G0026978.1 mouse_genomes_project 3 39966788 39969529 + protein_coding retained_intron MGP_NODShiLtJ_T0100430.1 MGP_NODShiLtJ_G0038824.1 mouse_genomes_project 3 1971889 1972022 - Gm22944 snoRNA snoRNA MGP_NODShiLtJ_T0061919.1 MGP_NODShiLtJ_G0027372.1 mouse_genomes_project 3 108394456 108477787 - MGP_NODShiLtJ_P0061919 Snx27 protein_coding protein_coding MGP_NODShiLtJ_T0061920.1 MGP_NODShiLtJ_G0027372.1 mouse_genomes_project 3 108396225 108477620 - MGP_NODShiLtJ_P0061920 Snx27 protein_coding protein_coding MGP_NODShiLtJ_T0061921.1 MGP_NODShiLtJ_G0027372.1 mouse_genomes_project 3 108397953 108421172 - Snx27 protein_coding processed_transcript MGP_NODShiLtJ_T0061922.1 MGP_NODShiLtJ_G0027372.1 mouse_genomes_project 3 108398040 108477750 - MGP_NODShiLtJ_P0061922 Snx27 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061923.1 MGP_NODShiLtJ_G0027372.1 mouse_genomes_project 3 108398050 108415981 - Snx27 protein_coding processed_transcript MGP_NODShiLtJ_T0061924.1 MGP_NODShiLtJ_G0027372.1 mouse_genomes_project 3 108398972 108456957 - MGP_NODShiLtJ_P0061924 Snx27 protein_coding protein_coding MGP_NODShiLtJ_T0061925.1 MGP_NODShiLtJ_G0027372.1 mouse_genomes_project 3 108415999 108456720 - MGP_NODShiLtJ_P0061925 Snx27 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061926.1 MGP_NODShiLtJ_G0027372.1 mouse_genomes_project 3 108428084 108428733 - Snx27 protein_coding processed_transcript MGP_NODShiLtJ_T0013778.1 MGP_NODShiLtJ_G0011886.1 mouse_genomes_project 3 4241608 4241726 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064131.1 MGP_NODShiLtJ_G0027822.1 mouse_genomes_project 3 178316011 178596458 - MGP_NODShiLtJ_P0064131 Tnni3k protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064132.1 MGP_NODShiLtJ_G0027822.1 mouse_genomes_project 3 178316019 178596458 - MGP_NODShiLtJ_P0064132 Tnni3k protein_coding protein_coding MGP_NODShiLtJ_T0064133.1 MGP_NODShiLtJ_G0027822.1 mouse_genomes_project 3 178571290 178596401 - Tnni3k protein_coding retained_intron MGP_NODShiLtJ_T0060778.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75317095 75811137 + MGP_NODShiLtJ_P0060778 Rsrc1 protein_coding protein_coding MGP_NODShiLtJ_T0060779.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75321345 75332875 + MGP_NODShiLtJ_P0060779 Rsrc1 protein_coding protein_coding MGP_NODShiLtJ_T0060780.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75321347 75812981 + MGP_NODShiLtJ_P0060780 Rsrc1 protein_coding protein_coding MGP_NODShiLtJ_T0060781.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75321360 75437840 + Rsrc1 protein_coding retained_intron MGP_NODShiLtJ_T0060782.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75321360 75806729 + MGP_NODShiLtJ_P0060782 Rsrc1 protein_coding protein_coding MGP_NODShiLtJ_T0060783.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75321378 75812976 + MGP_NODShiLtJ_P0060783 Rsrc1 protein_coding protein_coding MGP_NODShiLtJ_T0060784.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75321379 75811136 + MGP_NODShiLtJ_P0060784 Rsrc1 protein_coding protein_coding MGP_NODShiLtJ_T0060785.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75321642 75812982 + MGP_NODShiLtJ_P0060785 Rsrc1 protein_coding protein_coding MGP_NODShiLtJ_T0060786.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75321653 75331113 + MGP_NODShiLtJ_P0060786 Rsrc1 protein_coding protein_coding MGP_NODShiLtJ_T0060787.1 MGP_NODShiLtJ_G0027092.1 mouse_genomes_project 3 75326431 75331294 + Rsrc1 protein_coding retained_intron MGP_NODShiLtJ_T0062662.1 MGP_NODShiLtJ_G0027531.1 mouse_genomes_project 3 120121278 120137933 - MGP_NODShiLtJ_P0062662 Wnt2b protein_coding protein_coding MGP_NODShiLtJ_T0062663.1 MGP_NODShiLtJ_G0027531.1 mouse_genomes_project 3 120136425 120137733 - Wnt2b protein_coding retained_intron MGP_NODShiLtJ_T0013834.1 MGP_NODShiLtJ_G0011942.1 mouse_genomes_project 3 21223746 21224719 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007561.1 MGP_NODShiLtJ_G0006179.1 mouse_genomes_project 3 109408279 109420285 - lincRNA lincRNA MGP_NODShiLtJ_T0007716.1 MGP_NODShiLtJ_G0006304.1 mouse_genomes_project 3 176560745 176581893 - Gm43832 lincRNA lincRNA MGP_NODShiLtJ_T0007717.1 MGP_NODShiLtJ_G0006304.1 mouse_genomes_project 3 176564257 176574489 - Gm43832 lincRNA lincRNA MGP_NODShiLtJ_T0100467.1 MGP_NODShiLtJ_G0038861.1 mouse_genomes_project 3 98779418 98779549 - Gm26343 snoRNA snoRNA MGP_NODShiLtJ_T0099162.1 MGP_NODShiLtJ_G0037556.1 mouse_genomes_project 3 49386877 49386982 + Gm24997 snRNA snRNA MGP_NODShiLtJ_T0061358.1 MGP_NODShiLtJ_G0027220.1 mouse_genomes_project 3 101506066 101507311 - MGP_NODShiLtJ_P0061358 Rxfp4 protein_coding protein_coding MGP_NODShiLtJ_T0004251.1 MGP_NODShiLtJ_G0003724.1 mouse_genomes_project 3 110755835 110757862 - Gm15441 antisense antisense MGP_NODShiLtJ_T0004252.1 MGP_NODShiLtJ_G0003724.1 mouse_genomes_project 3 110755858 110766843 - Gm15441 antisense antisense MGP_NODShiLtJ_T0014214.1 MGP_NODShiLtJ_G0012322.1 mouse_genomes_project 3 158863216 158863574 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062930.1 MGP_NODShiLtJ_G0027601.1 mouse_genomes_project 3 124296327 124340642 - MGP_NODShiLtJ_P0062930 Gpsm2 protein_coding protein_coding MGP_NODShiLtJ_T0062931.1 MGP_NODShiLtJ_G0027601.1 mouse_genomes_project 3 124319794 124320884 - Gpsm2 protein_coding retained_intron MGP_NODShiLtJ_T0062932.1 MGP_NODShiLtJ_G0027601.1 mouse_genomes_project 3 124320210 124329973 - MGP_NODShiLtJ_P0062932 Gpsm2 protein_coding protein_coding MGP_NODShiLtJ_T0062933.1 MGP_NODShiLtJ_G0027601.1 mouse_genomes_project 3 124321346 124340449 - Gpsm2 protein_coding processed_transcript MGP_NODShiLtJ_T0017856.1 MGP_NODShiLtJ_G0015391.1 mouse_genomes_project 3 141515285 141559744 - 4930447N08Rik processed_transcript antisense MGP_NODShiLtJ_T0017857.1 MGP_NODShiLtJ_G0015391.1 mouse_genomes_project 3 141524539 141559843 - 4930447N08Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017858.1 MGP_NODShiLtJ_G0015391.1 mouse_genomes_project 3 141552878 141559689 - 4930447N08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017859.1 MGP_NODShiLtJ_G0015391.1 mouse_genomes_project 3 141552885 141559776 - 4930447N08Rik processed_transcript antisense MGP_NODShiLtJ_T0001272.1 MGP_NODShiLtJ_G0001193.1 mouse_genomes_project 3 140068216 140069504 + TEC TEC MGP_NODShiLtJ_T0013991.1 MGP_NODShiLtJ_G0012099.1 mouse_genomes_project 3 80631276 80631717 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060694.1 MGP_NODShiLtJ_G0027070.1 mouse_genomes_project 3 70211760 70255699 - MGP_NODShiLtJ_P0060694 Dhx36 protein_coding protein_coding MGP_NODShiLtJ_T0060695.1 MGP_NODShiLtJ_G0027070.1 mouse_genomes_project 3 70214392 70216335 - Dhx36 protein_coding retained_intron MGP_NODShiLtJ_T0060696.1 MGP_NODShiLtJ_G0027070.1 mouse_genomes_project 3 70231571 70237007 - Dhx36 protein_coding retained_intron MGP_NODShiLtJ_T0060697.1 MGP_NODShiLtJ_G0027070.1 mouse_genomes_project 3 70247506 70251663 - Dhx36 protein_coding retained_intron MGP_NODShiLtJ_T0062267.1 MGP_NODShiLtJ_G0027441.1 mouse_genomes_project 3 110864375 110868240 + MGP_NODShiLtJ_P0062267 Rbm8a protein_coding protein_coding MGP_NODShiLtJ_T0062268.1 MGP_NODShiLtJ_G0027441.1 mouse_genomes_project 3 110864382 110868240 + MGP_NODShiLtJ_P0062268 Rbm8a protein_coding protein_coding MGP_NODShiLtJ_T0062269.1 MGP_NODShiLtJ_G0027441.1 mouse_genomes_project 3 110864404 110866177 + MGP_NODShiLtJ_P0062269 Rbm8a protein_coding protein_coding MGP_NODShiLtJ_T0062270.1 MGP_NODShiLtJ_G0027441.1 mouse_genomes_project 3 110864415 110864997 + Rbm8a protein_coding retained_intron MGP_NODShiLtJ_T0062271.1 MGP_NODShiLtJ_G0027441.1 mouse_genomes_project 3 110865663 110866343 + Rbm8a protein_coding retained_intron MGP_NODShiLtJ_T0100444.1 MGP_NODShiLtJ_G0038838.1 mouse_genomes_project 3 42995215 42995300 - Gm23831 snoRNA snoRNA MGP_NODShiLtJ_T0001372.1 MGP_NODShiLtJ_G0001292.1 mouse_genomes_project 3 182565691 182566716 + TEC TEC MGP_NODShiLtJ_T0004275.1 MGP_NODShiLtJ_G0003740.1 mouse_genomes_project 3 122356362 122561249 - Gm27008 antisense antisense MGP_NODShiLtJ_T0004276.1 MGP_NODShiLtJ_G0003740.1 mouse_genomes_project 3 122373308 122564239 - Gm27008 antisense antisense MGP_NODShiLtJ_T0013887.1 MGP_NODShiLtJ_G0011995.1 mouse_genomes_project 3 43017970 43018250 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063631.1 MGP_NODShiLtJ_G0027728.1 mouse_genomes_project 3 158278405 158372773 + MGP_NODShiLtJ_P0063631 Emcn protein_coding protein_coding MGP_NODShiLtJ_T0063632.1 MGP_NODShiLtJ_G0027728.1 mouse_genomes_project 3 158278428 158361370 + Emcn protein_coding retained_intron MGP_NODShiLtJ_T0063633.1 MGP_NODShiLtJ_G0027728.1 mouse_genomes_project 3 158278481 158371657 + MGP_NODShiLtJ_P0063633 Emcn protein_coding protein_coding MGP_NODShiLtJ_T0063634.1 MGP_NODShiLtJ_G0027728.1 mouse_genomes_project 3 158278512 158367942 + MGP_NODShiLtJ_P0063634 Emcn protein_coding protein_coding MGP_NODShiLtJ_T0001195.1 MGP_NODShiLtJ_G0001116.1 mouse_genomes_project 3 64568849 64570025 - TEC TEC MGP_NODShiLtJ_T0007593.1 MGP_NODShiLtJ_G0006206.1 mouse_genomes_project 3 122243735 122295894 - Gm35507 lincRNA lincRNA MGP_NODShiLtJ_T0063045.1 MGP_NODShiLtJ_G0027625.1 mouse_genomes_project 3 134305433 134324229 - MGP_NODShiLtJ_P0063045 Rtca protein_coding protein_coding MGP_NODShiLtJ_T0063046.1 MGP_NODShiLtJ_G0027625.1 mouse_genomes_project 3 134305710 134312583 - Rtca protein_coding retained_intron MGP_NODShiLtJ_T0063047.1 MGP_NODShiLtJ_G0027625.1 mouse_genomes_project 3 134310769 134324045 - MGP_NODShiLtJ_P0063047 Rtca protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063048.1 MGP_NODShiLtJ_G0027625.1 mouse_genomes_project 3 134312308 134324086 - MGP_NODShiLtJ_P0063048 Rtca protein_coding protein_coding MGP_NODShiLtJ_T0063049.1 MGP_NODShiLtJ_G0027625.1 mouse_genomes_project 3 134316175 134324154 - MGP_NODShiLtJ_P0063049 Rtca protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013890.1 MGP_NODShiLtJ_G0011998.1 mouse_genomes_project 3 44734724 44735187 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099175.1 MGP_NODShiLtJ_G0037569.1 mouse_genomes_project 3 67426488 67426594 - Gm24382 snRNA snRNA MGP_NODShiLtJ_T0063730.1 MGP_NODShiLtJ_G0027751.1 mouse_genomes_project 3 162779797 162782149 - MGP_NODShiLtJ_P0063730 Pdha2 protein_coding protein_coding MGP_NODShiLtJ_T0099194.1 MGP_NODShiLtJ_G0037588.1 mouse_genomes_project 3 101918221 101918328 - Gm26465 snRNA snRNA MGP_NODShiLtJ_T0014073.1 MGP_NODShiLtJ_G0012181.1 mouse_genomes_project 3 110584382 110591982 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017842.1 MGP_NODShiLtJ_G0015388.1 mouse_genomes_project 3 133628895 133635341 - A930005H10Rik processed_transcript antisense MGP_NODShiLtJ_T0017843.1 MGP_NODShiLtJ_G0015388.1 mouse_genomes_project 3 133628895 133635305 - A930005H10Rik processed_transcript antisense MGP_NODShiLtJ_T0017844.1 MGP_NODShiLtJ_G0015388.1 mouse_genomes_project 3 133628897 133635163 - A930005H10Rik processed_transcript antisense MGP_NODShiLtJ_T0017845.1 MGP_NODShiLtJ_G0015388.1 mouse_genomes_project 3 133629100 133635315 - A930005H10Rik processed_transcript antisense MGP_NODShiLtJ_T0017846.1 MGP_NODShiLtJ_G0015388.1 mouse_genomes_project 3 133633214 133635308 - A930005H10Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017847.1 MGP_NODShiLtJ_G0015388.1 mouse_genomes_project 3 133633313 133635098 - A930005H10Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017848.1 MGP_NODShiLtJ_G0015388.1 mouse_genomes_project 3 133635032 133635341 - A930005H10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099230.1 MGP_NODShiLtJ_G0037624.1 mouse_genomes_project 3 160570314 160570421 - Gm24260 snRNA snRNA MGP_NODShiLtJ_T0098197.1 MGP_NODShiLtJ_G0036609.1 mouse_genomes_project 3 101556920 101557048 + Gm25820 scaRNA scaRNA MGP_NODShiLtJ_T0061300.1 MGP_NODShiLtJ_G0027213.1 mouse_genomes_project 3 101321695 101326155 - Lmna protein_coding retained_intron MGP_NODShiLtJ_T0061301.1 MGP_NODShiLtJ_G0027213.1 mouse_genomes_project 3 101322696 101345977 - MGP_NODShiLtJ_P0061301 Lmna protein_coding protein_coding MGP_NODShiLtJ_T0061302.1 MGP_NODShiLtJ_G0027213.1 mouse_genomes_project 3 101323394 101345979 - Lmna protein_coding processed_transcript MGP_NODShiLtJ_T0061303.1 MGP_NODShiLtJ_G0027213.1 mouse_genomes_project 3 101323624 101324412 - Lmna protein_coding retained_intron MGP_NODShiLtJ_T0061304.1 MGP_NODShiLtJ_G0027213.1 mouse_genomes_project 3 101324752 101345949 - MGP_NODShiLtJ_P0061304 Lmna protein_coding protein_coding MGP_NODShiLtJ_T0061305.1 MGP_NODShiLtJ_G0027213.1 mouse_genomes_project 3 101324753 101334845 - MGP_NODShiLtJ_P0061305 Lmna protein_coding protein_coding MGP_NODShiLtJ_T0061306.1 MGP_NODShiLtJ_G0027213.1 mouse_genomes_project 3 101345394 101352537 - MGP_NODShiLtJ_P0061306 Lmna protein_coding protein_coding MGP_NODShiLtJ_T0013927.1 MGP_NODShiLtJ_G0012035.1 mouse_genomes_project 3 59779332 59780070 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099195.1 MGP_NODShiLtJ_G0037589.1 mouse_genomes_project 3 102060302 102060406 - Gm22935 snRNA snRNA MGP_NODShiLtJ_T0004154.1 MGP_NODShiLtJ_G0003655.1 mouse_genomes_project 3 32309567 32350488 + Mecomos antisense antisense MGP_NODShiLtJ_T0004155.1 MGP_NODShiLtJ_G0003655.1 mouse_genomes_project 3 32320713 32326382 + Mecomos antisense antisense MGP_NODShiLtJ_T0007628.1 MGP_NODShiLtJ_G0006232.1 mouse_genomes_project 3 143940720 144080783 + Gm42825 lincRNA lincRNA MGP_NODShiLtJ_T0014002.1 MGP_NODShiLtJ_G0012110.1 mouse_genomes_project 3 86122149 86123451 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014037.1 MGP_NODShiLtJ_G0012145.1 mouse_genomes_project 3 101043806 101043953 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004337.1 MGP_NODShiLtJ_G0003778.1 mouse_genomes_project 3 159256108 159284987 - Gm16559 antisense antisense MGP_NODShiLtJ_T0060756.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74225399 74237447 - Ccnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060757.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74225399 74237497 - MGP_NODShiLtJ_P0060757 Ccnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060758.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74225443 74237280 - MGP_NODShiLtJ_P0060758 Ccnl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060759.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74225757 74237411 - Ccnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060760.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74226030 74227246 - Ccnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060761.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74227201 74236104 - MGP_NODShiLtJ_P0060761 Ccnl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060762.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74227755 74230226 - Ccnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060763.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74228139 74237429 - Ccnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060764.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74229148 74236137 - MGP_NODShiLtJ_P0060764 Ccnl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060765.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74229654 74231116 - Ccnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060766.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74230496 74232241 - Ccnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060767.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74230681 74236901 - Ccnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060768.1 MGP_NODShiLtJ_G0027088.1 mouse_genomes_project 3 74234493 74237376 - MGP_NODShiLtJ_P0060768 Ccnl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063549.1 MGP_NODShiLtJ_G0027715.1 mouse_genomes_project 3 155453703 155559740 + MGP_NODShiLtJ_P0063549 Tacr3 protein_coding protein_coding MGP_NODShiLtJ_T0001108.1 MGP_NODShiLtJ_G0001031.1 mouse_genomes_project 3 33317399 33317709 - TEC TEC MGP_NODShiLtJ_T0004263.1 MGP_NODShiLtJ_G0003732.1 mouse_genomes_project 3 117052225 117054410 + Gm16160 antisense antisense MGP_NODShiLtJ_T0013783.1 MGP_NODShiLtJ_G0011891.1 mouse_genomes_project 3 5669589 5670619 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007478.1 MGP_NODShiLtJ_G0006119.1 mouse_genomes_project 3 58512689 58520496 - Gm30074 lincRNA lincRNA MGP_NODShiLtJ_T0060722.1 MGP_NODShiLtJ_G0027074.1 mouse_genomes_project 3 71843726 71859743 - MGP_NODShiLtJ_P0060722 E130311K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0060723.1 MGP_NODShiLtJ_G0027074.1 mouse_genomes_project 3 71854032 71859662 - E130311K13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0060724.1 MGP_NODShiLtJ_G0027074.1 mouse_genomes_project 3 71857064 71859662 - E130311K13Rik protein_coding retained_intron MGP_NODShiLtJ_T0004309.1 MGP_NODShiLtJ_G0003759.1 mouse_genomes_project 3 145971856 145980806 - Gm17225 antisense antisense MGP_NODShiLtJ_T0001309.1 MGP_NODShiLtJ_G0001230.1 mouse_genomes_project 3 147789717 147791686 + TEC TEC MGP_NODShiLtJ_T0001310.1 MGP_NODShiLtJ_G0001230.1 mouse_genomes_project 3 147789718 147791686 + TEC TEC MGP_NODShiLtJ_T0013840.1 MGP_NODShiLtJ_G0011948.1 mouse_genomes_project 3 23025253 23025686 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061193.1 MGP_NODShiLtJ_G0027191.1 mouse_genomes_project 3 100659951 100664694 + MGP_NODShiLtJ_P0061193 Crabp2 protein_coding protein_coding MGP_NODShiLtJ_T0061194.1 MGP_NODShiLtJ_G0027191.1 mouse_genomes_project 3 100663461 100664303 + Crabp2 protein_coding retained_intron MGP_NODShiLtJ_T0013791.1 MGP_NODShiLtJ_G0011899.1 mouse_genomes_project 3 7571362 7571684 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061359.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101549051 101576682 + MGP_NODShiLtJ_P0061359 2810403A07Rik protein_coding protein_coding MGP_NODShiLtJ_T0061360.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101549062 101551311 + 2810403A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0061361.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101549075 101576612 + MGP_NODShiLtJ_P0061361 2810403A07Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061362.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101549075 101576320 + MGP_NODShiLtJ_P0061362 2810403A07Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061363.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101549081 101565428 + 2810403A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0061364.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101549085 101575761 + MGP_NODShiLtJ_P0061364 2810403A07Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061365.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101556431 101572666 + 2810403A07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0061366.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101562653 101564731 + 2810403A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0061367.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101563454 101572745 + 2810403A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0061368.1 MGP_NODShiLtJ_G0027221.1 mouse_genomes_project 3 101572537 101574842 + 2810403A07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0062712.1 MGP_NODShiLtJ_G0027546.1 mouse_genomes_project 3 121380284 121410569 + MGP_NODShiLtJ_P0062712 Chia1 protein_coding protein_coding MGP_NODShiLtJ_T0062713.1 MGP_NODShiLtJ_G0027546.1 mouse_genomes_project 3 121380445 121404192 + MGP_NODShiLtJ_P0062713 Chia1 protein_coding protein_coding MGP_NODShiLtJ_T0062714.1 MGP_NODShiLtJ_G0027546.1 mouse_genomes_project 3 121395988 121403808 + Chia1 protein_coding retained_intron MGP_NODShiLtJ_T0061625.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103075536 103130749 - MGP_NODShiLtJ_P0061625 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061626.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103075536 103130739 - MGP_NODShiLtJ_P0061626 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061627.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103075684 103130759 - MGP_NODShiLtJ_P0061627 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061628.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103075689 103130746 - MGP_NODShiLtJ_P0061628 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061629.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103076274 103078859 - MGP_NODShiLtJ_P0061629 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061630.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103077968 103079356 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061631.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103081563 103130736 - MGP_NODShiLtJ_P0061631 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061632.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103081788 103097935 - MGP_NODShiLtJ_P0061632 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061633.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103081789 103130799 - MGP_NODShiLtJ_P0061633 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061634.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103081789 103130756 - MGP_NODShiLtJ_P0061634 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061635.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103090789 103092896 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061636.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103090962 103097232 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061637.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103091622 103130615 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061638.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103092743 103094271 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061639.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103093154 103095139 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061640.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103096888 103104246 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061641.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103098676 103100111 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061642.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103113601 103116086 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061643.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103116209 103130366 - MGP_NODShiLtJ_P0061643 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061644.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103119072 103130786 - Ubap2l protein_coding retained_intron MGP_NODShiLtJ_T0061645.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103121044 103130912 - MGP_NODShiLtJ_P0061645 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061646.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103121114 103130722 - MGP_NODShiLtJ_P0061646 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0061647.1 MGP_NODShiLtJ_G0027266.1 mouse_genomes_project 3 103122178 103126542 - MGP_NODShiLtJ_P0061647 Ubap2l protein_coding protein_coding MGP_NODShiLtJ_T0007688.1 MGP_NODShiLtJ_G0006284.1 mouse_genomes_project 3 166062068 166098694 - Gm42709 lincRNA lincRNA MGP_NODShiLtJ_T0001249.1 MGP_NODShiLtJ_G0001170.1 mouse_genomes_project 3 119812483 119816704 - TEC TEC MGP_NODShiLtJ_T0013972.1 MGP_NODShiLtJ_G0012080.1 mouse_genomes_project 3 74478448 74478601 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014179.1 MGP_NODShiLtJ_G0012287.1 mouse_genomes_project 3 148048894 148049328 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007385.1 MGP_NODShiLtJ_G0006051.1 mouse_genomes_project 3 6224761 6270308 - lincRNA lincRNA MGP_NODShiLtJ_T0007386.1 MGP_NODShiLtJ_G0006051.1 mouse_genomes_project 3 6224761 6270315 - lincRNA lincRNA MGP_NODShiLtJ_T0062313.1 MGP_NODShiLtJ_G0027451.1 mouse_genomes_project 3 111085183 111105058 + MGP_NODShiLtJ_P0062313 Pdzk1 protein_coding protein_coding MGP_NODShiLtJ_T0062314.1 MGP_NODShiLtJ_G0027451.1 mouse_genomes_project 3 111085362 111105143 + MGP_NODShiLtJ_P0062314 Pdzk1 protein_coding protein_coding MGP_NODShiLtJ_T0062315.1 MGP_NODShiLtJ_G0027451.1 mouse_genomes_project 3 111085975 111129175 + MGP_NODShiLtJ_P0062315 Pdzk1 protein_coding protein_coding MGP_NODShiLtJ_T0062316.1 MGP_NODShiLtJ_G0027451.1 mouse_genomes_project 3 111088054 111128995 + MGP_NODShiLtJ_P0062316 Pdzk1 protein_coding protein_coding MGP_NODShiLtJ_T0062317.1 MGP_NODShiLtJ_G0027451.1 mouse_genomes_project 3 111088071 111128721 + MGP_NODShiLtJ_P0062317 Pdzk1 protein_coding protein_coding MGP_NODShiLtJ_T0062318.1 MGP_NODShiLtJ_G0027451.1 mouse_genomes_project 3 111088071 111128845 + MGP_NODShiLtJ_P0062318 Pdzk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062319.1 MGP_NODShiLtJ_G0027451.1 mouse_genomes_project 3 111089985 111103782 + MGP_NODShiLtJ_P0062319 Pdzk1 protein_coding protein_coding MGP_NODShiLtJ_T0010414.1 MGP_NODShiLtJ_G0008547.1 mouse_genomes_project 3 64526124 64526238 + Mir6377 miRNA miRNA MGP_NODShiLtJ_T0062456.1 MGP_NODShiLtJ_G0027493.1 mouse_genomes_project 3 116377252 116405679 - MGP_NODShiLtJ_P0062456 Atp1a1 protein_coding protein_coding MGP_NODShiLtJ_T0062457.1 MGP_NODShiLtJ_G0027493.1 mouse_genomes_project 3 116377349 116378592 - Atp1a1 protein_coding retained_intron MGP_NODShiLtJ_T0062458.1 MGP_NODShiLtJ_G0027493.1 mouse_genomes_project 3 116386819 116390045 - Atp1a1 protein_coding retained_intron MGP_NODShiLtJ_T0098345.1 MGP_NODShiLtJ_G0036750.1 mouse_genomes_project 3 119128704 119129845 - Gm42696 sense_intronic sense_intronic MGP_NODShiLtJ_T0004166.1 MGP_NODShiLtJ_G0003663.1 mouse_genomes_project 3 36402151 36402842 + Gm43140 antisense antisense MGP_NODShiLtJ_T0061811.1 MGP_NODShiLtJ_G0027316.1 mouse_genomes_project 3 105976476 105978428 - MGP_NODShiLtJ_P0061811 Sprr1b protein_coding protein_coding MGP_NODShiLtJ_T0062363.1 MGP_NODShiLtJ_G0027461.1 mouse_genomes_project 3 112033286 112034941 - MGP_NODShiLtJ_P0062363 Gm17651 protein_coding protein_coding MGP_NODShiLtJ_T0063480.1 MGP_NODShiLtJ_G0027701.1 mouse_genomes_project 3 151405077 151420837 - MGP_NODShiLtJ_P0063480 Cyp2u1 protein_coding protein_coding MGP_NODShiLtJ_T0063481.1 MGP_NODShiLtJ_G0027701.1 mouse_genomes_project 3 151410903 151420813 - MGP_NODShiLtJ_P0063481 Cyp2u1 protein_coding protein_coding MGP_NODShiLtJ_T0063482.1 MGP_NODShiLtJ_G0027701.1 mouse_genomes_project 3 151412039 151420840 - Cyp2u1 protein_coding processed_transcript MGP_NODShiLtJ_T0062647.1 MGP_NODShiLtJ_G0027529.1 mouse_genomes_project 3 119983022 120031764 - MGP_NODShiLtJ_P0062647 Capza1 protein_coding protein_coding MGP_NODShiLtJ_T0062648.1 MGP_NODShiLtJ_G0027529.1 mouse_genomes_project 3 119998687 120031659 - MGP_NODShiLtJ_P0062648 Capza1 protein_coding protein_coding MGP_NODShiLtJ_T0062649.1 MGP_NODShiLtJ_G0027529.1 mouse_genomes_project 3 120005279 120009648 - Capza1 protein_coding retained_intron MGP_NODShiLtJ_T0062650.1 MGP_NODShiLtJ_G0027529.1 mouse_genomes_project 3 120009008 120031632 - Capza1 protein_coding retained_intron MGP_NODShiLtJ_T0013933.1 MGP_NODShiLtJ_G0012041.1 mouse_genomes_project 3 64122660 64122913 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014145.1 MGP_NODShiLtJ_G0012253.1 mouse_genomes_project 3 133687011 133688176 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064095.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177381759 177405674 - MGP_NODShiLtJ_P0064095 Acadm protein_coding protein_coding MGP_NODShiLtJ_T0064096.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177384968 177390046 - Acadm protein_coding retained_intron MGP_NODShiLtJ_T0064097.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177385109 177398851 - Acadm protein_coding retained_intron MGP_NODShiLtJ_T0064098.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177390027 177397832 - Acadm protein_coding retained_intron MGP_NODShiLtJ_T0064099.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177397346 177399716 - Acadm protein_coding retained_intron MGP_NODShiLtJ_T0064100.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177397352 177405509 - MGP_NODShiLtJ_P0064100 Acadm protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064101.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177397406 177405488 - MGP_NODShiLtJ_P0064101 Acadm protein_coding protein_coding MGP_NODShiLtJ_T0064102.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177399336 177405484 - Acadm protein_coding retained_intron MGP_NODShiLtJ_T0064103.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177399698 177402945 - Acadm protein_coding retained_intron MGP_NODShiLtJ_T0064104.1 MGP_NODShiLtJ_G0027816.1 mouse_genomes_project 3 177402643 177405505 - Acadm protein_coding retained_intron MGP_NODShiLtJ_T0001220.1 MGP_NODShiLtJ_G0001141.1 mouse_genomes_project 3 90018441 90021558 - TEC TEC MGP_NODShiLtJ_T0060698.1 MGP_NODShiLtJ_G0027071.1 mouse_genomes_project 3 70279589 70360500 - MGP_NODShiLtJ_P0060698 Gpr149 protein_coding protein_coding MGP_NODShiLtJ_T0060699.1 MGP_NODShiLtJ_G0027071.1 mouse_genomes_project 3 70345812 70356849 - Gpr149 protein_coding retained_intron MGP_NODShiLtJ_T0060820.1 MGP_NODShiLtJ_G0027103.1 mouse_genomes_project 3 77434927 77437277 - MGP_NODShiLtJ_P0060820 Gm17641 protein_coding protein_coding MGP_NODShiLtJ_T0060821.1 MGP_NODShiLtJ_G0027104.1 mouse_genomes_project 3 77436596 77439174 + MGP_NODShiLtJ_P0060821 1110032F04Rik protein_coding protein_coding MGP_NODShiLtJ_T0064109.1 MGP_NODShiLtJ_G0027818.1 mouse_genomes_project 3 177807979 177835540 - MGP_NODShiLtJ_P0064109 Lhx8 protein_coding protein_coding MGP_NODShiLtJ_T0064110.1 MGP_NODShiLtJ_G0027818.1 mouse_genomes_project 3 177807981 177834940 - MGP_NODShiLtJ_P0064110 Lhx8 protein_coding protein_coding MGP_NODShiLtJ_T0064111.1 MGP_NODShiLtJ_G0027818.1 mouse_genomes_project 3 177808663 177833047 - MGP_NODShiLtJ_P0064111 Lhx8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064112.1 MGP_NODShiLtJ_G0027818.1 mouse_genomes_project 3 177821628 177829763 - Lhx8 protein_coding retained_intron MGP_NODShiLtJ_T0064113.1 MGP_NODShiLtJ_G0027818.1 mouse_genomes_project 3 177827138 177833515 - MGP_NODShiLtJ_P0064113 Lhx8 protein_coding protein_coding MGP_NODShiLtJ_T0014168.1 MGP_NODShiLtJ_G0012276.1 mouse_genomes_project 3 141960890 141961578 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098351.1 MGP_NODShiLtJ_G0036756.1 mouse_genomes_project 3 119240721 119244363 - sense_intronic sense_intronic MGP_NODShiLtJ_T0061752.1 MGP_NODShiLtJ_G0027284.1 mouse_genomes_project 3 103687172 103690539 - MGP_NODShiLtJ_P0061752 S100a1 protein_coding protein_coding MGP_NODShiLtJ_T0061753.1 MGP_NODShiLtJ_G0027284.1 mouse_genomes_project 3 103687175 103690425 - MGP_NODShiLtJ_P0061753 S100a1 protein_coding protein_coding MGP_NODShiLtJ_T0001223.1 MGP_NODShiLtJ_G0001144.1 mouse_genomes_project 3 96388086 96392552 - TEC TEC MGP_NODShiLtJ_T0004216.1 MGP_NODShiLtJ_G0003700.1 mouse_genomes_project 3 99368581 99379164 - Gm37876 antisense antisense MGP_NODShiLtJ_T0059716.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7438523 7524120 - MGP_NODShiLtJ_P0059716 Tpd52 protein_coding protein_coding MGP_NODShiLtJ_T0059717.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7441556 7523875 - MGP_NODShiLtJ_P0059717 Tpd52 protein_coding protein_coding MGP_NODShiLtJ_T0059718.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7443264 7478244 - MGP_NODShiLtJ_P0059718 Tpd52 protein_coding protein_coding MGP_NODShiLtJ_T0059719.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7443354 7523836 - MGP_NODShiLtJ_P0059719 Tpd52 protein_coding protein_coding MGP_NODShiLtJ_T0059720.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7443450 7523820 - MGP_NODShiLtJ_P0059720 Tpd52 protein_coding protein_coding MGP_NODShiLtJ_T0059721.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7443462 7476521 - MGP_NODShiLtJ_P0059721 Tpd52 protein_coding protein_coding MGP_NODShiLtJ_T0059722.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7443537 7523875 - MGP_NODShiLtJ_P0059722 Tpd52 protein_coding protein_coding MGP_NODShiLtJ_T0059723.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7462282 7523834 - Tpd52 protein_coding processed_transcript MGP_NODShiLtJ_T0059724.1 MGP_NODShiLtJ_G0026869.1 mouse_genomes_project 3 7462344 7523875 - MGP_NODShiLtJ_P0059724 Tpd52 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061743.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103673372 103685590 - MGP_NODShiLtJ_P0061743 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0061744.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103673372 103685589 - MGP_NODShiLtJ_P0061744 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0061745.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103673372 103685588 - MGP_NODShiLtJ_P0061745 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0061746.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103673374 103685600 - MGP_NODShiLtJ_P0061746 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0061747.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103673381 103685636 - MGP_NODShiLtJ_P0061747 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0061748.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103674368 103685612 - MGP_NODShiLtJ_P0061748 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0061749.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103674569 103685623 - MGP_NODShiLtJ_P0061749 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0061750.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103677743 103685614 - MGP_NODShiLtJ_P0061750 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0061751.1 MGP_NODShiLtJ_G0027283.1 mouse_genomes_project 3 103678716 103684611 - MGP_NODShiLtJ_P0061751 Chtop protein_coding protein_coding MGP_NODShiLtJ_T0014187.1 MGP_NODShiLtJ_G0012295.1 mouse_genomes_project 3 151011505 151013146 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017825.1 MGP_NODShiLtJ_G0015380.1 mouse_genomes_project 3 110403263 110404922 - Gm20627 processed_transcript lincRNA MGP_NODShiLtJ_T0017826.1 MGP_NODShiLtJ_G0015380.1 mouse_genomes_project 3 110403265 110404114 - Gm20627 processed_transcript retained_intron MGP_NODShiLtJ_T0061492.1 MGP_NODShiLtJ_G0027240.1 mouse_genomes_project 3 102222678 102235485 - MGP_NODShiLtJ_P0061492 Trim46 protein_coding protein_coding MGP_NODShiLtJ_T0061493.1 MGP_NODShiLtJ_G0027240.1 mouse_genomes_project 3 102223336 102227847 - Trim46 protein_coding processed_transcript MGP_NODShiLtJ_T0061494.1 MGP_NODShiLtJ_G0027240.1 mouse_genomes_project 3 102223369 102235460 - MGP_NODShiLtJ_P0061494 Trim46 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061495.1 MGP_NODShiLtJ_G0027240.1 mouse_genomes_project 3 102223400 102235381 - MGP_NODShiLtJ_P0061495 Trim46 protein_coding protein_coding MGP_NODShiLtJ_T0061496.1 MGP_NODShiLtJ_G0027240.1 mouse_genomes_project 3 102232800 102235897 - MGP_NODShiLtJ_P0061496 Trim46 protein_coding protein_coding MGP_NODShiLtJ_T0013835.1 MGP_NODShiLtJ_G0011943.1 mouse_genomes_project 3 21709166 21709376 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017801.1 MGP_NODShiLtJ_G0015369.1 mouse_genomes_project 3 40256877 40352979 + Gm43439 processed_transcript processed_transcript MGP_NODShiLtJ_T0063767.1 MGP_NODShiLtJ_G0027760.1 mouse_genomes_project 3 164543761 164591289 + MGP_NODShiLtJ_P0063767 Kyat3 protein_coding protein_coding MGP_NODShiLtJ_T0063768.1 MGP_NODShiLtJ_G0027760.1 mouse_genomes_project 3 164543790 164593653 + MGP_NODShiLtJ_P0063768 Kyat3 protein_coding protein_coding MGP_NODShiLtJ_T0063769.1 MGP_NODShiLtJ_G0027760.1 mouse_genomes_project 3 164543796 164571801 + MGP_NODShiLtJ_P0063769 Kyat3 protein_coding protein_coding MGP_NODShiLtJ_T0063770.1 MGP_NODShiLtJ_G0027760.1 mouse_genomes_project 3 164543804 164591126 + MGP_NODShiLtJ_P0063770 Kyat3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063771.1 MGP_NODShiLtJ_G0027760.1 mouse_genomes_project 3 164568710 164576897 + Kyat3 protein_coding processed_transcript MGP_NODShiLtJ_T0063772.1 MGP_NODShiLtJ_G0027760.1 mouse_genomes_project 3 164573999 164575960 + Kyat3 protein_coding retained_intron MGP_NODShiLtJ_T0063773.1 MGP_NODShiLtJ_G0027760.1 mouse_genomes_project 3 164583176 164586514 + Kyat3 protein_coding retained_intron MGP_NODShiLtJ_T0063774.1 MGP_NODShiLtJ_G0027760.1 mouse_genomes_project 3 164584074 164591124 + Kyat3 protein_coding processed_transcript MGP_NODShiLtJ_T0001162.1 MGP_NODShiLtJ_G0001085.1 mouse_genomes_project 3 57860791 57862894 - TEC TEC MGP_NODShiLtJ_T0013816.1 MGP_NODShiLtJ_G0011924.1 mouse_genomes_project 3 14907247 14908231 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004182.1 MGP_NODShiLtJ_G0003674.1 mouse_genomes_project 3 58137033 58143392 + Gm37229 antisense antisense MGP_NODShiLtJ_T0061802.1 MGP_NODShiLtJ_G0027308.1 mouse_genomes_project 3 105859129 105859741 + MGP_NODShiLtJ_P0061802 Sprr2d protein_coding protein_coding MGP_NODShiLtJ_T0100477.1 MGP_NODShiLtJ_G0038871.1 mouse_genomes_project 3 113673491 113673620 - Gm22341 snoRNA snoRNA MGP_NODShiLtJ_T0100462.1 MGP_NODShiLtJ_G0038856.1 mouse_genomes_project 3 93989516 93989656 + Gm22531 snoRNA snoRNA MGP_NODShiLtJ_T0013897.1 MGP_NODShiLtJ_G0012005.1 mouse_genomes_project 3 48658572 48658981 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014230.1 MGP_NODShiLtJ_G0012338.1 mouse_genomes_project 3 164317700 164318337 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004299.1 MGP_NODShiLtJ_G0003752.1 mouse_genomes_project 3 140174082 140179876 + A530020G20Rik antisense antisense MGP_NODShiLtJ_T0004300.1 MGP_NODShiLtJ_G0003752.1 mouse_genomes_project 3 140174092 140174947 + A530020G20Rik antisense antisense MGP_NODShiLtJ_T0004301.1 MGP_NODShiLtJ_G0003752.1 mouse_genomes_project 3 140174142 140177286 + A530020G20Rik antisense antisense MGP_NODShiLtJ_T0001251.1 MGP_NODShiLtJ_G0001172.1 mouse_genomes_project 3 121832991 121835575 + TEC TEC MGP_NODShiLtJ_T0062581.1 MGP_NODShiLtJ_G0027516.1 mouse_genomes_project 3 118845751 118859065 + MGP_NODShiLtJ_P0062581 protein_coding protein_coding MGP_NODShiLtJ_T0062583.1 MGP_NODShiLtJ_G0027516.1 mouse_genomes_project 3 118845824 118858870 + MGP_NODShiLtJ_P0062583 protein_coding protein_coding MGP_NODShiLtJ_T0062584.1 MGP_NODShiLtJ_G0027516.1 mouse_genomes_project 3 118845831 118859065 + MGP_NODShiLtJ_P0062584 protein_coding protein_coding MGP_NODShiLtJ_T0062585.1 MGP_NODShiLtJ_G0027516.1 mouse_genomes_project 3 118845859 118859067 + MGP_NODShiLtJ_P0062585 protein_coding protein_coding MGP_NODShiLtJ_T0062586.1 MGP_NODShiLtJ_G0027516.1 mouse_genomes_project 3 118846067 118858803 + MGP_NODShiLtJ_P0062586 protein_coding protein_coding MGP_NODShiLtJ_T0062587.1 MGP_NODShiLtJ_G0027516.1 mouse_genomes_project 3 118846095 118851106 + protein_coding processed_transcript MGP_NODShiLtJ_T0062588.1 MGP_NODShiLtJ_G0027516.1 mouse_genomes_project 3 118851295 118857726 + MGP_NODShiLtJ_P0062588 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0017868.1 MGP_NODShiLtJ_G0015394.1 mouse_genomes_project 3 156540557 156551867 - processed_transcript macro_lncRNA MGP_NODShiLtJ_T0017869.1 MGP_NODShiLtJ_G0015394.1 mouse_genomes_project 3 156540660 156551867 - processed_transcript antisense MGP_NODShiLtJ_T0061828.1 MGP_NODShiLtJ_G0027331.1 mouse_genomes_project 3 106311607 106313735 - MGP_NODShiLtJ_P0061828 Lce1e protein_coding protein_coding MGP_NODShiLtJ_T0061841.1 MGP_NODShiLtJ_G0027343.1 mouse_genomes_project 3 106572685 106573804 + MGP_NODShiLtJ_P0061841 Lce3b protein_coding protein_coding MGP_NODShiLtJ_T0004237.1 MGP_NODShiLtJ_G0003716.1 mouse_genomes_project 3 108972146 108977790 - Gm15265 antisense antisense MGP_NODShiLtJ_T0004238.1 MGP_NODShiLtJ_G0003716.1 mouse_genomes_project 3 108972180 108978213 - Gm15265 antisense antisense MGP_NODShiLtJ_T0061850.1 MGP_NODShiLtJ_G0027350.1 mouse_genomes_project 3 106826372 106831044 + MGP_NODShiLtJ_P0061850 Crnn protein_coding protein_coding MGP_NODShiLtJ_T0061851.1 MGP_NODShiLtJ_G0027350.1 mouse_genomes_project 3 106826374 106831392 + MGP_NODShiLtJ_P0061851 Crnn protein_coding protein_coding MGP_NODShiLtJ_T0061852.1 MGP_NODShiLtJ_G0027350.1 mouse_genomes_project 3 106829782 106831391 + MGP_NODShiLtJ_P0061852 Crnn protein_coding protein_coding MGP_NODShiLtJ_T0060644.1 MGP_NODShiLtJ_G0027058.1 mouse_genomes_project 3 66375111 66386425 - MGP_NODShiLtJ_P0060644 P2ry12 protein_coding protein_coding MGP_NODShiLtJ_T0060645.1 MGP_NODShiLtJ_G0027058.1 mouse_genomes_project 3 66375198 66424667 - MGP_NODShiLtJ_P0060645 P2ry12 protein_coding protein_coding MGP_NODShiLtJ_T0060646.1 MGP_NODShiLtJ_G0027058.1 mouse_genomes_project 3 66375199 66379099 - MGP_NODShiLtJ_P0060646 P2ry12 protein_coding protein_coding MGP_NODShiLtJ_T0060647.1 MGP_NODShiLtJ_G0027058.1 mouse_genomes_project 3 66375200 66424707 - MGP_NODShiLtJ_P0060647 P2ry12 protein_coding protein_coding MGP_NODShiLtJ_T0060648.1 MGP_NODShiLtJ_G0027058.1 mouse_genomes_project 3 66376744 66379040 - MGP_NODShiLtJ_P0060648 P2ry12 protein_coding protein_coding MGP_NODShiLtJ_T0063263.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142370812 142528176 - MGP_NODShiLtJ_P0063263 Ndst3 protein_coding protein_coding MGP_NODShiLtJ_T0063264.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142370818 142546353 - MGP_NODShiLtJ_P0063264 Ndst3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063265.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142370820 142546353 - MGP_NODShiLtJ_P0063265 Ndst3 protein_coding protein_coding MGP_NODShiLtJ_T0063266.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142370821 142528259 - MGP_NODShiLtJ_P0063266 Ndst3 protein_coding protein_coding MGP_NODShiLtJ_T0063267.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142373211 142473159 - MGP_NODShiLtJ_P0063267 Ndst3 protein_coding protein_coding MGP_NODShiLtJ_T0063268.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142373340 142545780 - MGP_NODShiLtJ_P0063268 Ndst3 protein_coding protein_coding MGP_NODShiLtJ_T0063269.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142398473 142528444 - Ndst3 protein_coding retained_intron MGP_NODShiLtJ_T0063270.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142402543 142406013 - Ndst3 protein_coding retained_intron MGP_NODShiLtJ_T0063271.1 MGP_NODShiLtJ_G0027666.1 mouse_genomes_project 3 142402714 142424460 - Ndst3 protein_coding processed_transcript MGP_NODShiLtJ_T0001192.1 MGP_NODShiLtJ_G0001113.1 mouse_genomes_project 3 62897082 62900088 - TEC TEC MGP_NODShiLtJ_T0004295.1 MGP_NODShiLtJ_G0003748.1 mouse_genomes_project 3 133881865 133897353 + Gm43109 antisense antisense MGP_NODShiLtJ_T0007484.1 MGP_NODShiLtJ_G0006124.1 mouse_genomes_project 3 59331240 59344104 - lincRNA lincRNA MGP_NODShiLtJ_T0010415.1 MGP_NODShiLtJ_G0008548.1 mouse_genomes_project 3 73911609 73911748 + Mir8120 miRNA miRNA MGP_NODShiLtJ_T0098022.1 MGP_NODShiLtJ_G0036434.1 mouse_genomes_project 3 27207959 27208094 + Gm24250 rRNA rRNA MGP_NODShiLtJ_T0013920.1 MGP_NODShiLtJ_G0012028.1 mouse_genomes_project 3 57650141 57650526 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001364.1 MGP_NODShiLtJ_G0001284.1 mouse_genomes_project 3 181002955 181004520 + TEC TEC MGP_NODShiLtJ_T0061174.1 MGP_NODShiLtJ_G0027188.1 mouse_genomes_project 3 100630469 100635250 + MGP_NODShiLtJ_P0061174 Mrpl24 protein_coding protein_coding MGP_NODShiLtJ_T0061175.1 MGP_NODShiLtJ_G0027188.1 mouse_genomes_project 3 100630469 100635240 + MGP_NODShiLtJ_P0061175 Mrpl24 protein_coding protein_coding MGP_NODShiLtJ_T0061176.1 MGP_NODShiLtJ_G0027188.1 mouse_genomes_project 3 100630499 100633630 + MGP_NODShiLtJ_P0061176 Mrpl24 protein_coding protein_coding MGP_NODShiLtJ_T0061177.1 MGP_NODShiLtJ_G0027188.1 mouse_genomes_project 3 100630520 100631485 + Mrpl24 protein_coding retained_intron MGP_NODShiLtJ_T0061178.1 MGP_NODShiLtJ_G0027188.1 mouse_genomes_project 3 100630526 100635250 + MGP_NODShiLtJ_P0061178 Mrpl24 protein_coding protein_coding MGP_NODShiLtJ_T0061179.1 MGP_NODShiLtJ_G0027188.1 mouse_genomes_project 3 100633216 100635250 + MGP_NODShiLtJ_P0061179 Mrpl24 protein_coding protein_coding MGP_NODShiLtJ_T0014186.1 MGP_NODShiLtJ_G0012294.1 mouse_genomes_project 3 150921792 150922304 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014181.1 MGP_NODShiLtJ_G0012289.1 mouse_genomes_project 3 149217578 149218342 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014070.1 MGP_NODShiLtJ_G0012178.1 mouse_genomes_project 3 110016378 110021345 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064201.1 MGP_NODShiLtJ_G0027832.1 mouse_genomes_project 3 182090763 182383584 - MGP_NODShiLtJ_P0064201 Lrrc7 protein_coding protein_coding MGP_NODShiLtJ_T0064202.1 MGP_NODShiLtJ_G0027832.1 mouse_genomes_project 3 182090767 182664472 - MGP_NODShiLtJ_P0064202 Lrrc7 protein_coding protein_coding MGP_NODShiLtJ_T0064203.1 MGP_NODShiLtJ_G0027832.1 mouse_genomes_project 3 182092266 182383604 - MGP_NODShiLtJ_P0064203 Lrrc7 protein_coding protein_coding MGP_NODShiLtJ_T0064204.1 MGP_NODShiLtJ_G0027832.1 mouse_genomes_project 3 182092266 182664472 - MGP_NODShiLtJ_P0064204 Lrrc7 protein_coding protein_coding MGP_NODShiLtJ_T0064205.1 MGP_NODShiLtJ_G0027832.1 mouse_genomes_project 3 182457792 182663596 - Lrrc7 protein_coding retained_intron MGP_NODShiLtJ_T0062668.1 MGP_NODShiLtJ_G0027533.1 mouse_genomes_project 3 120251230 120266498 + MGP_NODShiLtJ_P0062668 4930564D02Rik protein_coding protein_coding MGP_NODShiLtJ_T0101893.1 MGP_NODShiLtJ_G0040061.1 mouse_genomes_project 3 121709845 121710947 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0062855.1 MGP_NODShiLtJ_G0027585.1 mouse_genomes_project 3 123759404 123764846 + MGP_NODShiLtJ_P0062855 Amigo1 protein_coding protein_coding MGP_NODShiLtJ_T0062856.1 MGP_NODShiLtJ_G0027585.1 mouse_genomes_project 3 123759419 123764847 + MGP_NODShiLtJ_P0062856 Amigo1 protein_coding protein_coding MGP_NODShiLtJ_T0062857.1 MGP_NODShiLtJ_G0027585.1 mouse_genomes_project 3 123759427 123765356 + MGP_NODShiLtJ_P0062857 Amigo1 protein_coding protein_coding MGP_NODShiLtJ_T0062858.1 MGP_NODShiLtJ_G0027585.1 mouse_genomes_project 3 123761112 123764845 + MGP_NODShiLtJ_P0062858 Amigo1 protein_coding protein_coding MGP_NODShiLtJ_T0062859.1 MGP_NODShiLtJ_G0027585.1 mouse_genomes_project 3 123761170 123764837 + MGP_NODShiLtJ_P0062859 Amigo1 protein_coding protein_coding MGP_NODShiLtJ_T0007558.1 MGP_NODShiLtJ_G0006176.1 mouse_genomes_project 3 107015357 107173292 - lincRNA lincRNA MGP_NODShiLtJ_T0061223.1 MGP_NODShiLtJ_G0027199.1 mouse_genomes_project 3 100893065 100924375 + MGP_NODShiLtJ_P0061223 Mef2d protein_coding protein_coding MGP_NODShiLtJ_T0061224.1 MGP_NODShiLtJ_G0027199.1 mouse_genomes_project 3 100893109 100922219 + MGP_NODShiLtJ_P0061224 Mef2d protein_coding protein_coding MGP_NODShiLtJ_T0061225.1 MGP_NODShiLtJ_G0027199.1 mouse_genomes_project 3 100893265 100920947 + MGP_NODShiLtJ_P0061225 Mef2d protein_coding protein_coding MGP_NODShiLtJ_T0061226.1 MGP_NODShiLtJ_G0027199.1 mouse_genomes_project 3 100893265 100920947 + MGP_NODShiLtJ_P0061226 Mef2d protein_coding protein_coding MGP_NODShiLtJ_T0061227.1 MGP_NODShiLtJ_G0027199.1 mouse_genomes_project 3 100893267 100906648 + Mef2d protein_coding retained_intron MGP_NODShiLtJ_T0061228.1 MGP_NODShiLtJ_G0027199.1 mouse_genomes_project 3 100913615 100921077 + Mef2d protein_coding processed_transcript MGP_NODShiLtJ_T0061229.1 MGP_NODShiLtJ_G0027199.1 mouse_genomes_project 3 100920543 100921195 + Mef2d protein_coding processed_transcript MGP_NODShiLtJ_T0007675.1 MGP_NODShiLtJ_G0006273.1 mouse_genomes_project 3 165255290 165258661 + Gm43612 lincRNA lincRNA MGP_NODShiLtJ_T0060093.1 MGP_NODShiLtJ_G0026957.1 mouse_genomes_project 3 35221131 35232885 + MGP_NODShiLtJ_P0060093 Ndufb5 protein_coding protein_coding MGP_NODShiLtJ_T0060094.1 MGP_NODShiLtJ_G0026957.1 mouse_genomes_project 3 35221136 35224261 + Ndufb5 protein_coding retained_intron MGP_NODShiLtJ_T0060095.1 MGP_NODShiLtJ_G0026957.1 mouse_genomes_project 3 35221142 35235551 + MGP_NODShiLtJ_P0060095 Ndufb5 protein_coding protein_coding MGP_NODShiLtJ_T0060096.1 MGP_NODShiLtJ_G0026957.1 mouse_genomes_project 3 35221166 35235232 + MGP_NODShiLtJ_P0060096 Ndufb5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060097.1 MGP_NODShiLtJ_G0026957.1 mouse_genomes_project 3 35221167 35232456 + MGP_NODShiLtJ_P0060097 Ndufb5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060098.1 MGP_NODShiLtJ_G0026957.1 mouse_genomes_project 3 35225653 35235088 + MGP_NODShiLtJ_P0060098 Ndufb5 protein_coding protein_coding MGP_NODShiLtJ_T0013782.1 MGP_NODShiLtJ_G0011890.1 mouse_genomes_project 3 5625229 5625349 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001091.1 MGP_NODShiLtJ_G0001014.1 mouse_genomes_project 3 19215705 19219650 + TEC TEC MGP_NODShiLtJ_T0061547.1 MGP_NODShiLtJ_G0027252.1 mouse_genomes_project 3 102398139 102410764 - MGP_NODShiLtJ_P0061547 Flad1 protein_coding protein_coding MGP_NODShiLtJ_T0061548.1 MGP_NODShiLtJ_G0027252.1 mouse_genomes_project 3 102399104 102410757 - MGP_NODShiLtJ_P0061548 Flad1 protein_coding protein_coding MGP_NODShiLtJ_T0061549.1 MGP_NODShiLtJ_G0027252.1 mouse_genomes_project 3 102399802 102410763 - MGP_NODShiLtJ_P0061549 Flad1 protein_coding protein_coding MGP_NODShiLtJ_T0061550.1 MGP_NODShiLtJ_G0027252.1 mouse_genomes_project 3 102407623 102410675 - MGP_NODShiLtJ_P0061550 Flad1 protein_coding protein_coding MGP_NODShiLtJ_T0061551.1 MGP_NODShiLtJ_G0027252.1 mouse_genomes_project 3 102407848 102410764 - MGP_NODShiLtJ_P0061551 Flad1 protein_coding protein_coding MGP_NODShiLtJ_T0001240.1 MGP_NODShiLtJ_G0001161.1 mouse_genomes_project 3 110655858 110658723 - TEC TEC MGP_NODShiLtJ_T0007560.1 MGP_NODShiLtJ_G0006178.1 mouse_genomes_project 3 108565790 108702448 + lincRNA lincRNA MGP_NODShiLtJ_T0064105.1 MGP_NODShiLtJ_G0027817.1 mouse_genomes_project 3 177436685 177770196 + MGP_NODShiLtJ_P0064105 Slc44a5 protein_coding protein_coding MGP_NODShiLtJ_T0064106.1 MGP_NODShiLtJ_G0027817.1 mouse_genomes_project 3 177610938 177766257 + MGP_NODShiLtJ_P0064106 Slc44a5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064107.1 MGP_NODShiLtJ_G0027817.1 mouse_genomes_project 3 177716774 177719818 + Slc44a5 protein_coding processed_transcript MGP_NODShiLtJ_T0064108.1 MGP_NODShiLtJ_G0027817.1 mouse_genomes_project 3 177755067 177770196 + Slc44a5 protein_coding retained_intron MGP_NODShiLtJ_T0001277.1 MGP_NODShiLtJ_G0001198.1 mouse_genomes_project 3 141305311 141307860 - TEC TEC MGP_NODShiLtJ_T0059926.1 MGP_NODShiLtJ_G0026926.1 mouse_genomes_project 3 29369937 29693704 - MGP_NODShiLtJ_P0059926 Fndc3b protein_coding protein_coding MGP_NODShiLtJ_T0059927.1 MGP_NODShiLtJ_G0026926.1 mouse_genomes_project 3 29369937 29693745 - MGP_NODShiLtJ_P0059927 Fndc3b protein_coding protein_coding MGP_NODShiLtJ_T0059928.1 MGP_NODShiLtJ_G0026926.1 mouse_genomes_project 3 29458645 29694613 - Fndc3b protein_coding retained_intron MGP_NODShiLtJ_T0059929.1 MGP_NODShiLtJ_G0026926.1 mouse_genomes_project 3 29465650 29694545 - MGP_NODShiLtJ_P0059929 Fndc3b protein_coding protein_coding MGP_NODShiLtJ_T0098360.1 MGP_NODShiLtJ_G0036765.1 mouse_genomes_project 3 119786322 119787581 + Gm43585 sense_intronic sense_intronic MGP_NODShiLtJ_T0098024.1 MGP_NODShiLtJ_G0036436.1 mouse_genomes_project 3 58152992 58153109 + n-R5s196 rRNA rRNA MGP_NODShiLtJ_T0007448.1 MGP_NODShiLtJ_G0006099.1 mouse_genomes_project 3 40759895 40766139 + Gm42921 lincRNA lincRNA MGP_NODShiLtJ_T0010417.1 MGP_NODShiLtJ_G0008550.1 mouse_genomes_project 3 82998559 82998669 + Gm24544 miRNA miRNA MGP_NODShiLtJ_T0004256.1 MGP_NODShiLtJ_G0003728.1 mouse_genomes_project 3 112093124 112098928 + Gm43076 antisense antisense MGP_NODShiLtJ_T0004257.1 MGP_NODShiLtJ_G0003728.1 mouse_genomes_project 3 112093315 112095839 + Gm43076 antisense antisense MGP_NODShiLtJ_T0062934.1 MGP_NODShiLtJ_G0027602.1 mouse_genomes_project 3 124359765 124411782 + MGP_NODShiLtJ_P0062934 Aknad1 protein_coding protein_coding MGP_NODShiLtJ_T0062935.1 MGP_NODShiLtJ_G0027602.1 mouse_genomes_project 3 124364224 124403695 + MGP_NODShiLtJ_P0062935 Aknad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062936.1 MGP_NODShiLtJ_G0027602.1 mouse_genomes_project 3 124377645 124387211 + Aknad1 protein_coding retained_intron MGP_NODShiLtJ_T0062937.1 MGP_NODShiLtJ_G0027602.1 mouse_genomes_project 3 124385328 124403400 + Aknad1 protein_coding retained_intron MGP_NODShiLtJ_T0013805.1 MGP_NODShiLtJ_G0011913.1 mouse_genomes_project 3 12347413 12347756 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061836.1 MGP_NODShiLtJ_G0027338.1 mouse_genomes_project 3 106437633 106439236 - MGP_NODShiLtJ_P0061836 Lce1k protein_coding protein_coding MGP_NODShiLtJ_T0011429.1 MGP_NODShiLtJ_G0009562.1 mouse_genomes_project 3 66132619 66132695 + Gm27793 misc_RNA misc_RNA MGP_NODShiLtJ_T0063005.1 MGP_NODShiLtJ_G0027616.1 mouse_genomes_project 3 131226638 131359852 + MGP_NODShiLtJ_P0063005 Col11a1 protein_coding protein_coding MGP_NODShiLtJ_T0063006.1 MGP_NODShiLtJ_G0027616.1 mouse_genomes_project 3 131226638 131519371 + MGP_NODShiLtJ_P0063006 Col11a1 protein_coding protein_coding MGP_NODShiLtJ_T0063007.1 MGP_NODShiLtJ_G0027616.1 mouse_genomes_project 3 131226732 131229250 + Col11a1 protein_coding retained_intron MGP_NODShiLtJ_T0063008.1 MGP_NODShiLtJ_G0027616.1 mouse_genomes_project 3 131277848 131278817 + Col11a1 protein_coding retained_intron MGP_NODShiLtJ_T0063009.1 MGP_NODShiLtJ_G0027616.1 mouse_genomes_project 3 131402205 131431718 + Col11a1 protein_coding retained_intron MGP_NODShiLtJ_T0063010.1 MGP_NODShiLtJ_G0027616.1 mouse_genomes_project 3 131425483 131518119 + MGP_NODShiLtJ_P0063010 Col11a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063011.1 MGP_NODShiLtJ_G0027616.1 mouse_genomes_project 3 131444057 131518601 + MGP_NODShiLtJ_P0063011 Col11a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014226.1 MGP_NODShiLtJ_G0012334.1 mouse_genomes_project 3 162328747 162329288 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001331.1 MGP_NODShiLtJ_G0001251.1 mouse_genomes_project 3 156352494 156356391 - TEC TEC MGP_NODShiLtJ_T0063798.1 MGP_NODShiLtJ_G0027764.1 mouse_genomes_project 3 166410977 166567141 - MGP_NODShiLtJ_P0063798 Hs2st1 protein_coding protein_coding MGP_NODShiLtJ_T0063799.1 MGP_NODShiLtJ_G0027764.1 mouse_genomes_project 3 166435236 166566841 - MGP_NODShiLtJ_P0063799 Hs2st1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063800.1 MGP_NODShiLtJ_G0027764.1 mouse_genomes_project 3 166564797 166567118 - Hs2st1 protein_coding retained_intron MGP_NODShiLtJ_T0001346.1 MGP_NODShiLtJ_G0001266.1 mouse_genomes_project 3 175108889 175112337 + TEC TEC MGP_NODShiLtJ_T0061805.1 MGP_NODShiLtJ_G0027311.1 mouse_genomes_project 3 105909782 105911421 + MGP_NODShiLtJ_P0061805 Sprr2h protein_coding protein_coding MGP_NODShiLtJ_T0061806.1 MGP_NODShiLtJ_G0027311.1 mouse_genomes_project 3 105909797 105911197 + MGP_NODShiLtJ_P0061806 Sprr2h protein_coding protein_coding MGP_NODShiLtJ_T0013807.1 MGP_NODShiLtJ_G0011915.1 mouse_genomes_project 3 13414363 13414922 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013904.1 MGP_NODShiLtJ_G0012012.1 mouse_genomes_project 3 52182065 52196945 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100452.1 MGP_NODShiLtJ_G0038846.1 mouse_genomes_project 3 63257427 63257558 - Gm25727 snoRNA snoRNA MGP_NODShiLtJ_T0061778.1 MGP_NODShiLtJ_G0027293.1 mouse_genomes_project 3 103798684 103800217 + MGP_NODShiLtJ_P0061778 S100a6 protein_coding protein_coding MGP_NODShiLtJ_T0061779.1 MGP_NODShiLtJ_G0027293.1 mouse_genomes_project 3 103798956 103799810 + S100a6 protein_coding retained_intron MGP_NODShiLtJ_T0061780.1 MGP_NODShiLtJ_G0027293.1 mouse_genomes_project 3 103799107 103800217 + MGP_NODShiLtJ_P0061780 S100a6 protein_coding protein_coding MGP_NODShiLtJ_T0061781.1 MGP_NODShiLtJ_G0027293.1 mouse_genomes_project 3 103799562 103821149 + MGP_NODShiLtJ_P0061781 S100a6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059806.1 MGP_NODShiLtJ_G0026899.1 mouse_genomes_project 3 16257495 16282351 + Ythdf3 protein_coding processed_transcript MGP_NODShiLtJ_T0059807.1 MGP_NODShiLtJ_G0026899.1 mouse_genomes_project 3 16257495 16298965 + MGP_NODShiLtJ_P0059807 Ythdf3 protein_coding protein_coding MGP_NODShiLtJ_T0101112.1 MGP_NODShiLtJ_G0039457.1 mouse_genomes_project 3 62559357 62560325 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101113.1 MGP_NODShiLtJ_G0039457.1 mouse_genomes_project 3 62559516 62560619 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0014257.1 MGP_NODShiLtJ_G0012365.1 mouse_genomes_project 3 181806166 181807200 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100499.1 MGP_NODShiLtJ_G0038893.1 mouse_genomes_project 3 165615458 165615582 + Gm24728 snoRNA snoRNA MGP_NODShiLtJ_T0007527.1 MGP_NODShiLtJ_G0006158.1 mouse_genomes_project 3 95014106 95032042 - Gm43348 lincRNA lincRNA MGP_NODShiLtJ_T0014140.1 MGP_NODShiLtJ_G0012248.1 mouse_genomes_project 3 130995453 130997096 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099182.1 MGP_NODShiLtJ_G0037576.1 mouse_genomes_project 3 77107834 77108023 - Gm22073 snRNA snRNA MGP_NODShiLtJ_T0007662.1 MGP_NODShiLtJ_G0006263.1 mouse_genomes_project 3 159749041 159768327 - 4930425O10Rik lincRNA lincRNA MGP_NODShiLtJ_T0001132.1 MGP_NODShiLtJ_G0001055.1 mouse_genomes_project 3 40852681 40853785 + TEC TEC MGP_NODShiLtJ_T0014200.1 MGP_NODShiLtJ_G0012308.1 mouse_genomes_project 3 155602035 155602552 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062071.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109283160 109287779 + Fam63a protein_coding processed_transcript MGP_NODShiLtJ_T0062072.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109283232 109289653 + Fam63a protein_coding processed_transcript MGP_NODShiLtJ_T0062073.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109283302 109285332 + Fam63a protein_coding processed_transcript MGP_NODShiLtJ_T0062074.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109283660 109286673 + Fam63a protein_coding processed_transcript MGP_NODShiLtJ_T0062075.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109284759 109297982 + MGP_NODShiLtJ_P0062075 Fam63a protein_coding protein_coding MGP_NODShiLtJ_T0062076.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109284759 109297982 + MGP_NODShiLtJ_P0062076 Fam63a protein_coding protein_coding MGP_NODShiLtJ_T0062077.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109285030 109293584 + Fam63a protein_coding retained_intron MGP_NODShiLtJ_T0062078.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109285417 109289653 + Fam63a protein_coding processed_transcript MGP_NODShiLtJ_T0062079.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109287654 109289831 + MGP_NODShiLtJ_P0062079 Fam63a protein_coding protein_coding MGP_NODShiLtJ_T0062080.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109288014 109289777 + Fam63a protein_coding processed_transcript MGP_NODShiLtJ_T0062081.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109289764 109297979 + MGP_NODShiLtJ_P0062081 Fam63a protein_coding protein_coding MGP_NODShiLtJ_T0062082.1 MGP_NODShiLtJ_G0027398.1 mouse_genomes_project 3 109293759 109297977 + Fam63a protein_coding processed_transcript MGP_NODShiLtJ_T0060074.1 MGP_NODShiLtJ_G0026954.1 mouse_genomes_project 3 35050805 35087365 - MGP_NODShiLtJ_P0060074 Gnb4 protein_coding protein_coding MGP_NODShiLtJ_T0060075.1 MGP_NODShiLtJ_G0026954.1 mouse_genomes_project 3 35054470 35087305 - Gnb4 protein_coding retained_intron MGP_NODShiLtJ_T0060076.1 MGP_NODShiLtJ_G0026954.1 mouse_genomes_project 3 35054470 35087297 - MGP_NODShiLtJ_P0060076 Gnb4 protein_coding protein_coding MGP_NODShiLtJ_T0060077.1 MGP_NODShiLtJ_G0026954.1 mouse_genomes_project 3 35055533 35087302 - MGP_NODShiLtJ_P0060077 Gnb4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060078.1 MGP_NODShiLtJ_G0026954.1 mouse_genomes_project 3 35058200 35068675 - Gnb4 protein_coding retained_intron MGP_NODShiLtJ_T0060079.1 MGP_NODShiLtJ_G0026954.1 mouse_genomes_project 3 35061630 35087259 - MGP_NODShiLtJ_P0060079 Gnb4 protein_coding protein_coding MGP_NODShiLtJ_T0060080.1 MGP_NODShiLtJ_G0026954.1 mouse_genomes_project 3 35062706 35087305 - Gnb4 protein_coding retained_intron MGP_NODShiLtJ_T0060081.1 MGP_NODShiLtJ_G0026954.1 mouse_genomes_project 3 35070331 35087309 - Gnb4 protein_coding retained_intron MGP_NODShiLtJ_T0001151.1 MGP_NODShiLtJ_G0001074.1 mouse_genomes_project 3 56910074 56914162 - TEC TEC MGP_NODShiLtJ_T0007445.1 MGP_NODShiLtJ_G0006097.1 mouse_genomes_project 3 40119907 40125616 + Gm12532 lincRNA lincRNA MGP_NODShiLtJ_T0060774.1 MGP_NODShiLtJ_G0027091.1 mouse_genomes_project 3 75306368 75316968 - MGP_NODShiLtJ_P0060774 Shox2 protein_coding protein_coding MGP_NODShiLtJ_T0060775.1 MGP_NODShiLtJ_G0027091.1 mouse_genomes_project 3 75306377 75317024 - MGP_NODShiLtJ_P0060775 Shox2 protein_coding protein_coding MGP_NODShiLtJ_T0060776.1 MGP_NODShiLtJ_G0027091.1 mouse_genomes_project 3 75306432 75317477 - MGP_NODShiLtJ_P0060776 Shox2 protein_coding protein_coding MGP_NODShiLtJ_T0060777.1 MGP_NODShiLtJ_G0027091.1 mouse_genomes_project 3 75308548 75314533 - MGP_NODShiLtJ_P0060777 Shox2 protein_coding protein_coding MGP_NODShiLtJ_T0063678.1 MGP_NODShiLtJ_G0027740.1 mouse_genomes_project 3 159141544 159159300 - MGP_NODShiLtJ_P0063678 4930579F01Rik protein_coding protein_coding MGP_NODShiLtJ_T0063679.1 MGP_NODShiLtJ_G0027740.1 mouse_genomes_project 3 159141601 159159340 - MGP_NODShiLtJ_P0063679 4930579F01Rik protein_coding protein_coding MGP_NODShiLtJ_T0063680.1 MGP_NODShiLtJ_G0027740.1 mouse_genomes_project 3 159155203 159167824 - 4930579F01Rik protein_coding processed_transcript MGP_NODShiLtJ_T0014218.1 MGP_NODShiLtJ_G0012326.1 mouse_genomes_project 3 159637210 159637870 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013910.1 MGP_NODShiLtJ_G0012018.1 mouse_genomes_project 3 55438268 55439720 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001343.1 MGP_NODShiLtJ_G0001263.1 mouse_genomes_project 3 171145870 171146410 + TEC TEC MGP_NODShiLtJ_T0013873.1 MGP_NODShiLtJ_G0011981.1 mouse_genomes_project 3 40008167 40008864 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014220.1 MGP_NODShiLtJ_G0012328.1 mouse_genomes_project 3 160201624 160202062 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059715.1 MGP_NODShiLtJ_G0026868.1 mouse_genomes_project 3 7309798 7436849 - MGP_NODShiLtJ_P0059715 Mrps28 protein_coding protein_coding MGP_NODShiLtJ_T0007396.1 MGP_NODShiLtJ_G0006058.1 mouse_genomes_project 3 13017150 13018540 - Gm2464 lincRNA lincRNA MGP_NODShiLtJ_T0062762.1 MGP_NODShiLtJ_G0027560.1 mouse_genomes_project 3 122724828 122728934 + MGP_NODShiLtJ_P0062762 A630076J17Rik protein_coding protein_coding MGP_NODShiLtJ_T0001332.1 MGP_NODShiLtJ_G0001252.1 mouse_genomes_project 3 156576010 156578263 + TEC TEC MGP_NODShiLtJ_T0060974.1 MGP_NODShiLtJ_G0027139.1 mouse_genomes_project 3 94104981 94125099 + Asic5 protein_coding processed_transcript MGP_NODShiLtJ_T0060975.1 MGP_NODShiLtJ_G0027139.1 mouse_genomes_project 3 94122346 94147570 + MGP_NODShiLtJ_P0060975 Asic5 protein_coding protein_coding MGP_NODShiLtJ_T0004181.1 MGP_NODShiLtJ_G0003673.1 mouse_genomes_project 3 50018061 50046146 - 1700027H10Rik antisense antisense MGP_NODShiLtJ_T0063960.1 MGP_NODShiLtJ_G0027798.1 mouse_genomes_project 3 174654822 174777510 + MGP_NODShiLtJ_P0063960 Adgrl4 protein_coding protein_coding MGP_NODShiLtJ_T0063961.1 MGP_NODShiLtJ_G0027798.1 mouse_genomes_project 3 174654864 174726123 + MGP_NODShiLtJ_P0063961 Adgrl4 protein_coding protein_coding MGP_NODShiLtJ_T0063962.1 MGP_NODShiLtJ_G0027798.1 mouse_genomes_project 3 174655209 174723880 + Adgrl4 protein_coding processed_transcript MGP_NODShiLtJ_T0063963.1 MGP_NODShiLtJ_G0027798.1 mouse_genomes_project 3 174656031 174726094 + Adgrl4 protein_coding retained_intron MGP_NODShiLtJ_T0063964.1 MGP_NODShiLtJ_G0027798.1 mouse_genomes_project 3 174725997 174735649 + Adgrl4 protein_coding processed_transcript MGP_NODShiLtJ_T0063965.1 MGP_NODShiLtJ_G0027798.1 mouse_genomes_project 3 174745638 174750352 + Adgrl4 protein_coding processed_transcript MGP_NODShiLtJ_T0007531.1 MGP_NODShiLtJ_G0006161.1 mouse_genomes_project 3 95671574 95673956 + Gm38096 lincRNA lincRNA MGP_NODShiLtJ_T0014021.1 MGP_NODShiLtJ_G0012129.1 mouse_genomes_project 3 94867127 94867707 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062962.1 MGP_NODShiLtJ_G0027607.1 mouse_genomes_project 3 124602250 124602643 - MGP_NODShiLtJ_P0062962 Gm9857 protein_coding protein_coding MGP_NODShiLtJ_T0010423.1 MGP_NODShiLtJ_G0008556.1 mouse_genomes_project 3 100970281 100970389 - Gm25641 miRNA miRNA MGP_NODShiLtJ_T0099229.1 MGP_NODShiLtJ_G0037623.1 mouse_genomes_project 3 159325184 159325343 + Gm23467 snRNA snRNA MGP_NODShiLtJ_T0001292.1 MGP_NODShiLtJ_G0001213.1 mouse_genomes_project 3 146334099 146337682 + TEC TEC MGP_NODShiLtJ_T0062019.1 MGP_NODShiLtJ_G0027387.1 mouse_genomes_project 3 109119977 109126416 - MGP_NODShiLtJ_P0062019 Scnm1 protein_coding protein_coding MGP_NODShiLtJ_T0062020.1 MGP_NODShiLtJ_G0027387.1 mouse_genomes_project 3 109120160 109121101 - Scnm1 protein_coding retained_intron MGP_NODShiLtJ_T0062021.1 MGP_NODShiLtJ_G0027387.1 mouse_genomes_project 3 109120161 109126178 - Scnm1 protein_coding retained_intron MGP_NODShiLtJ_T0062022.1 MGP_NODShiLtJ_G0027387.1 mouse_genomes_project 3 109120163 109120730 - Scnm1 protein_coding retained_intron MGP_NODShiLtJ_T0062023.1 MGP_NODShiLtJ_G0027387.1 mouse_genomes_project 3 109120165 109120903 - Scnm1 protein_coding retained_intron MGP_NODShiLtJ_T0062024.1 MGP_NODShiLtJ_G0027387.1 mouse_genomes_project 3 109120167 109121499 - Scnm1 protein_coding processed_transcript MGP_NODShiLtJ_T0062025.1 MGP_NODShiLtJ_G0027387.1 mouse_genomes_project 3 109120170 109126416 - MGP_NODShiLtJ_P0062025 Scnm1 protein_coding protein_coding MGP_NODShiLtJ_T0062026.1 MGP_NODShiLtJ_G0027387.1 mouse_genomes_project 3 109120734 109126344 - Scnm1 protein_coding retained_intron MGP_NODShiLtJ_T0061109.1 MGP_NODShiLtJ_G0027174.1 mouse_genomes_project 3 99715175 99813076 - MGP_NODShiLtJ_P0061109 Kirrel protein_coding protein_coding MGP_NODShiLtJ_T0061110.1 MGP_NODShiLtJ_G0027174.1 mouse_genomes_project 3 99715183 99813123 - MGP_NODShiLtJ_P0061110 Kirrel protein_coding protein_coding MGP_NODShiLtJ_T0061111.1 MGP_NODShiLtJ_G0027174.1 mouse_genomes_project 3 99722337 99812926 - MGP_NODShiLtJ_P0061111 Kirrel protein_coding protein_coding MGP_NODShiLtJ_T0060140.1 MGP_NODShiLtJ_G0026963.1 mouse_genomes_project 3 36658921 36687510 - MGP_NODShiLtJ_P0060140 Dnajc19 protein_coding protein_coding MGP_NODShiLtJ_T0060141.1 MGP_NODShiLtJ_G0026963.1 mouse_genomes_project 3 36683476 36687519 - MGP_NODShiLtJ_P0060141 Dnajc19 protein_coding protein_coding MGP_NODShiLtJ_T0060142.1 MGP_NODShiLtJ_G0026963.1 mouse_genomes_project 3 36683521 36687508 - MGP_NODShiLtJ_P0060142 Dnajc19 protein_coding protein_coding MGP_NODShiLtJ_T0060143.1 MGP_NODShiLtJ_G0026963.1 mouse_genomes_project 3 36683551 36686378 - Dnajc19 protein_coding retained_intron MGP_NODShiLtJ_T0060144.1 MGP_NODShiLtJ_G0026963.1 mouse_genomes_project 3 36683631 36687460 - MGP_NODShiLtJ_P0060144 Dnajc19 protein_coding protein_coding MGP_NODShiLtJ_T0062435.1 MGP_NODShiLtJ_G0027486.1 mouse_genomes_project 3 115567660 115647321 + MGP_NODShiLtJ_P0062435 Vtcn1 protein_coding protein_coding MGP_NODShiLtJ_T0013785.1 MGP_NODShiLtJ_G0011893.1 mouse_genomes_project 3 6193089 6193676 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014149.1 MGP_NODShiLtJ_G0012257.1 mouse_genomes_project 3 134896849 134897579 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014092.1 MGP_NODShiLtJ_G0012200.1 mouse_genomes_project 3 116043719 116044279 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004307.1 MGP_NODShiLtJ_G0003757.1 mouse_genomes_project 3 142288578 142291698 - Gm43591 antisense antisense MGP_NODShiLtJ_T0004298.1 MGP_NODShiLtJ_G0003751.1 mouse_genomes_project 3 134466737 134467276 + Gm42457 antisense antisense MGP_NODShiLtJ_T0100459.1 MGP_NODShiLtJ_G0038853.1 mouse_genomes_project 3 86490639 86490774 + Gm25846 snoRNA snoRNA MGP_NODShiLtJ_T0014150.1 MGP_NODShiLtJ_G0012258.1 mouse_genomes_project 3 135010245 135010922 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007430.1 MGP_NODShiLtJ_G0006083.1 mouse_genomes_project 3 36616639 36618814 - Gm43077 lincRNA lincRNA MGP_NODShiLtJ_T0014105.1 MGP_NODShiLtJ_G0012213.1 mouse_genomes_project 3 119215874 119216712 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100465.1 MGP_NODShiLtJ_G0038859.1 mouse_genomes_project 3 98623139 98623207 - Snord73a snoRNA snoRNA MGP_NODShiLtJ_T0098362.1 MGP_NODShiLtJ_G0036767.1 mouse_genomes_project 3 120001087 120002840 - Gm42659 sense_intronic sense_intronic MGP_NODShiLtJ_T0099170.1 MGP_NODShiLtJ_G0037564.1 mouse_genomes_project 3 62249992 62250100 + Gm25404 snRNA snRNA MGP_NODShiLtJ_T0007471.1 MGP_NODShiLtJ_G0006113.1 mouse_genomes_project 3 54353595 54360799 - lincRNA lincRNA MGP_NODShiLtJ_T0014196.1 MGP_NODShiLtJ_G0012304.1 mouse_genomes_project 3 154747575 154748041 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098025.1 MGP_NODShiLtJ_G0036437.1 mouse_genomes_project 3 78340240 78340354 + Gm25621 rRNA rRNA MGP_NODShiLtJ_T0004261.1 MGP_NODShiLtJ_G0003731.1 mouse_genomes_project 3 116217680 116218719 - Gm42538 antisense antisense MGP_NODShiLtJ_T0004262.1 MGP_NODShiLtJ_G0003731.1 mouse_genomes_project 3 116218339 116220010 - Gm42538 antisense antisense MGP_NODShiLtJ_T0001157.1 MGP_NODShiLtJ_G0001080.1 mouse_genomes_project 3 57548646 57550271 + TEC TEC MGP_NODShiLtJ_T0014074.1 MGP_NODShiLtJ_G0012182.1 mouse_genomes_project 3 110595796 110596248 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014160.1 MGP_NODShiLtJ_G0012268.1 mouse_genomes_project 3 140485459 140485865 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098324.1 MGP_NODShiLtJ_G0036729.1 mouse_genomes_project 3 113772503 113775962 + Gm42717 sense_intronic sense_intronic MGP_NODShiLtJ_T0063754.1 MGP_NODShiLtJ_G0027755.1 mouse_genomes_project 3 164259051 164276759 + Gbp5 protein_coding processed_transcript MGP_NODShiLtJ_T0063755.1 MGP_NODShiLtJ_G0027755.1 mouse_genomes_project 3 164263504 164286544 + MGP_NODShiLtJ_P0063755 Gbp5 protein_coding protein_coding MGP_NODShiLtJ_T0063756.1 MGP_NODShiLtJ_G0027755.1 mouse_genomes_project 3 164268454 164272999 + Gbp5 protein_coding retained_intron MGP_NODShiLtJ_T0099232.1 MGP_NODShiLtJ_G0037626.1 mouse_genomes_project 3 168394893 168395046 - Gm25627 snRNA snRNA MGP_NODShiLtJ_T0013847.1 MGP_NODShiLtJ_G0011955.1 mouse_genomes_project 3 28942464 28942575 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061573.1 MGP_NODShiLtJ_G0027257.1 mouse_genomes_project 3 102462014 102472648 + MGP_NODShiLtJ_P0061573 Pmvk protein_coding protein_coding MGP_NODShiLtJ_T0061574.1 MGP_NODShiLtJ_G0027257.1 mouse_genomes_project 3 102462053 102472660 + MGP_NODShiLtJ_P0061574 Pmvk protein_coding protein_coding MGP_NODShiLtJ_T0061575.1 MGP_NODShiLtJ_G0027257.1 mouse_genomes_project 3 102462254 102472650 + MGP_NODShiLtJ_P0061575 Pmvk protein_coding protein_coding MGP_NODShiLtJ_T0004230.1 MGP_NODShiLtJ_G0003710.1 mouse_genomes_project 3 103616042 103623597 + Gm16048 antisense antisense MGP_NODShiLtJ_T0061826.1 MGP_NODShiLtJ_G0027329.1 mouse_genomes_project 3 106287069 106289731 + MGP_NODShiLtJ_P0061826 Lce1c protein_coding protein_coding MGP_NODShiLtJ_T0101898.1 MGP_NODShiLtJ_G0040066.1 mouse_genomes_project 3 140825121 140935134 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013982.1 MGP_NODShiLtJ_G0012090.1 mouse_genomes_project 3 78050989 78052349 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007489.1 MGP_NODShiLtJ_G0006129.1 mouse_genomes_project 3 64522208 64536594 - Gm26671 lincRNA lincRNA MGP_NODShiLtJ_T0007490.1 MGP_NODShiLtJ_G0006129.1 mouse_genomes_project 3 64531741 64536655 - Gm26671 lincRNA lincRNA MGP_NODShiLtJ_T0007491.1 MGP_NODShiLtJ_G0006129.1 mouse_genomes_project 3 64532095 64536625 - Gm26671 lincRNA lincRNA MGP_NODShiLtJ_T0007492.1 MGP_NODShiLtJ_G0006129.1 mouse_genomes_project 3 64533660 64536661 - Gm26671 lincRNA lincRNA MGP_NODShiLtJ_T0101129.1 MGP_NODShiLtJ_G0039465.1 mouse_genomes_project 3 148706698 148707384 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0060834.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77576691 77605259 + MGP_NODShiLtJ_P0060834 Smc4 protein_coding protein_coding MGP_NODShiLtJ_T0060835.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77576923 77588794 + MGP_NODShiLtJ_P0060835 Smc4 protein_coding protein_coding MGP_NODShiLtJ_T0060836.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77576944 77605254 + MGP_NODShiLtJ_P0060836 Smc4 protein_coding protein_coding MGP_NODShiLtJ_T0060837.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77576961 77605259 + MGP_NODShiLtJ_P0060837 Smc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060838.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77576968 77599097 + MGP_NODShiLtJ_P0060838 Smc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060839.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77587175 77588859 + Smc4 protein_coding retained_intron MGP_NODShiLtJ_T0060840.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77587381 77590005 + Smc4 protein_coding processed_transcript MGP_NODShiLtJ_T0060841.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77589598 77592081 + Smc4 protein_coding retained_intron MGP_NODShiLtJ_T0060842.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77592728 77594959 + Smc4 protein_coding retained_intron MGP_NODShiLtJ_T0060843.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77594851 77598540 + MGP_NODShiLtJ_P0060843 Smc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060844.1 MGP_NODShiLtJ_G0027106.1 mouse_genomes_project 3 77600984 77603712 + Smc4 protein_coding retained_intron MGP_NODShiLtJ_T0007480.1 MGP_NODShiLtJ_G0006121.1 mouse_genomes_project 3 58903668 58937907 + Gm30173 lincRNA lincRNA MGP_NODShiLtJ_T0004290.1 MGP_NODShiLtJ_G0003743.1 mouse_genomes_project 3 123822981 123831058 - 1700010K24Rik antisense antisense MGP_NODShiLtJ_T0007576.1 MGP_NODShiLtJ_G0006193.1 mouse_genomes_project 3 115412837 115425743 + lincRNA lincRNA MGP_NODShiLtJ_T0060466.1 MGP_NODShiLtJ_G0027019.1 mouse_genomes_project 3 59931183 59942101 + Stoml3 protein_coding retained_intron MGP_NODShiLtJ_T0060467.1 MGP_NODShiLtJ_G0027019.1 mouse_genomes_project 3 59931257 59952888 + MGP_NODShiLtJ_P0060467 Stoml3 protein_coding protein_coding MGP_NODShiLtJ_T0061513.1 MGP_NODShiLtJ_G0027244.1 mouse_genomes_project 3 102262458 102271231 - MGP_NODShiLtJ_P0061513 Efna1 protein_coding protein_coding MGP_NODShiLtJ_T0061514.1 MGP_NODShiLtJ_G0027244.1 mouse_genomes_project 3 102262467 102271330 - MGP_NODShiLtJ_P0061514 Efna1 protein_coding protein_coding MGP_NODShiLtJ_T0062426.1 MGP_NODShiLtJ_G0027484.1 mouse_genomes_project 3 115156403 115195073 - Fam46c protein_coding processed_transcript MGP_NODShiLtJ_T0062427.1 MGP_NODShiLtJ_G0027484.1 mouse_genomes_project 3 115156406 115195069 - Fam46c protein_coding processed_transcript MGP_NODShiLtJ_T0062428.1 MGP_NODShiLtJ_G0027484.1 mouse_genomes_project 3 115172975 115196135 - MGP_NODShiLtJ_P0062428 Fam46c protein_coding protein_coding MGP_NODShiLtJ_T0060991.1 MGP_NODShiLtJ_G0027143.1 mouse_genomes_project 3 94726143 94736233 - MGP_NODShiLtJ_P0060991 Npy2r protein_coding protein_coding MGP_NODShiLtJ_T0060992.1 MGP_NODShiLtJ_G0027143.1 mouse_genomes_project 3 94726146 94736201 - MGP_NODShiLtJ_P0060992 Npy2r protein_coding protein_coding MGP_NODShiLtJ_T0060993.1 MGP_NODShiLtJ_G0027143.1 mouse_genomes_project 3 94728077 94736109 - MGP_NODShiLtJ_P0060993 Npy2r protein_coding protein_coding MGP_NODShiLtJ_T0060994.1 MGP_NODShiLtJ_G0027143.1 mouse_genomes_project 3 94728077 94736109 - MGP_NODShiLtJ_P0060994 Npy2r protein_coding protein_coding MGP_NODShiLtJ_T0101882.1 MGP_NODShiLtJ_G0040050.1 mouse_genomes_project 3 108036972 108037600 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0061837.1 MGP_NODShiLtJ_G0027339.1 mouse_genomes_project 3 106457558 106461773 - MGP_NODShiLtJ_P0061837 Kprp protein_coding protein_coding MGP_NODShiLtJ_T0001283.1 MGP_NODShiLtJ_G0001204.1 mouse_genomes_project 3 143363379 143364665 - TEC TEC MGP_NODShiLtJ_T0063623.1 MGP_NODShiLtJ_G0027727.1 mouse_genomes_project 3 157511893 157649910 + Ppp3ca protein_coding processed_transcript MGP_NODShiLtJ_T0063624.1 MGP_NODShiLtJ_G0027727.1 mouse_genomes_project 3 157511893 157801922 + MGP_NODShiLtJ_P0063624 Ppp3ca protein_coding protein_coding MGP_NODShiLtJ_T0063625.1 MGP_NODShiLtJ_G0027727.1 mouse_genomes_project 3 157512539 157799184 + MGP_NODShiLtJ_P0063625 Ppp3ca protein_coding protein_coding MGP_NODShiLtJ_T0063626.1 MGP_NODShiLtJ_G0027727.1 mouse_genomes_project 3 157688835 157740673 + Ppp3ca protein_coding processed_transcript MGP_NODShiLtJ_T0063627.1 MGP_NODShiLtJ_G0027727.1 mouse_genomes_project 3 157739606 157742253 + Ppp3ca protein_coding retained_intron MGP_NODShiLtJ_T0063628.1 MGP_NODShiLtJ_G0027727.1 mouse_genomes_project 3 157747112 157749149 + Ppp3ca protein_coding retained_intron MGP_NODShiLtJ_T0063629.1 MGP_NODShiLtJ_G0027727.1 mouse_genomes_project 3 157761487 157790979 + Ppp3ca protein_coding processed_transcript MGP_NODShiLtJ_T0063630.1 MGP_NODShiLtJ_G0027727.1 mouse_genomes_project 3 157762303 157764852 + Ppp3ca protein_coding retained_intron MGP_NODShiLtJ_T0100508.1 MGP_NODShiLtJ_G0038902.1 mouse_genomes_project 3 181147273 181147405 + Gm24373 snoRNA snoRNA MGP_NODShiLtJ_T0001235.1 MGP_NODShiLtJ_G0001156.1 mouse_genomes_project 3 109371961 109373403 + TEC TEC MGP_NODShiLtJ_T0060318.1 MGP_NODShiLtJ_G0026995.1 mouse_genomes_project 3 44047867 44165530 + MGP_NODShiLtJ_P0060318 protein_coding protein_coding MGP_NODShiLtJ_T0060319.1 MGP_NODShiLtJ_G0026995.1 mouse_genomes_project 3 44047999 44165528 + MGP_NODShiLtJ_P0060319 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060320.1 MGP_NODShiLtJ_G0026995.1 mouse_genomes_project 3 44047999 44163713 + MGP_NODShiLtJ_P0060320 protein_coding protein_coding MGP_NODShiLtJ_T0060321.1 MGP_NODShiLtJ_G0026995.1 mouse_genomes_project 3 44048028 44153485 + MGP_NODShiLtJ_P0060321 protein_coding protein_coding MGP_NODShiLtJ_T0060322.1 MGP_NODShiLtJ_G0026995.1 mouse_genomes_project 3 44048044 44164543 + MGP_NODShiLtJ_P0060322 protein_coding protein_coding MGP_NODShiLtJ_T0060323.1 MGP_NODShiLtJ_G0026995.1 mouse_genomes_project 3 44048046 44164560 + MGP_NODShiLtJ_P0060323 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060324.1 MGP_NODShiLtJ_G0026995.1 mouse_genomes_project 3 44157984 44164101 + protein_coding processed_transcript MGP_NODShiLtJ_T0062719.1 MGP_NODShiLtJ_G0027549.1 mouse_genomes_project 3 121729825 121755288 - MGP_NODShiLtJ_P0062719 Chil6 protein_coding protein_coding MGP_NODShiLtJ_T0060856.1 MGP_NODShiLtJ_G0027111.1 mouse_genomes_project 3 78194121 78227687 - MGP_NODShiLtJ_P0060856 B3galnt1 protein_coding protein_coding MGP_NODShiLtJ_T0007538.1 MGP_NODShiLtJ_G0006168.1 mouse_genomes_project 3 100953787 100959284 - AI849053 lincRNA lincRNA MGP_NODShiLtJ_T0001178.1 MGP_NODShiLtJ_G0001099.1 mouse_genomes_project 3 58405994 58407793 - TEC TEC MGP_NODShiLtJ_T0059686.1 MGP_NODShiLtJ_G0026859.1 mouse_genomes_project 3 2792322 3033794 + MGP_NODShiLtJ_P0059686 Zfhx4 protein_coding protein_coding MGP_NODShiLtJ_T0059687.1 MGP_NODShiLtJ_G0026859.1 mouse_genomes_project 3 2792342 2934813 + Zfhx4 protein_coding retained_intron MGP_NODShiLtJ_T0059688.1 MGP_NODShiLtJ_G0026859.1 mouse_genomes_project 3 2792350 3036484 + MGP_NODShiLtJ_P0059688 Zfhx4 protein_coding protein_coding MGP_NODShiLtJ_T0059689.1 MGP_NODShiLtJ_G0026859.1 mouse_genomes_project 3 2795354 2818927 + MGP_NODShiLtJ_P0059689 Zfhx4 protein_coding protein_coding MGP_NODShiLtJ_T0059690.1 MGP_NODShiLtJ_G0026859.1 mouse_genomes_project 3 2818580 3036486 + MGP_NODShiLtJ_P0059690 Zfhx4 protein_coding protein_coding MGP_NODShiLtJ_T0100474.1 MGP_NODShiLtJ_G0038868.1 mouse_genomes_project 3 109079561 109079646 - Gm24920 snoRNA snoRNA MGP_NODShiLtJ_T0061791.1 MGP_NODShiLtJ_G0027299.1 mouse_genomes_project 3 104333074 104335733 - MGP_NODShiLtJ_P0061791 9130204L05Rik protein_coding protein_coding MGP_NODShiLtJ_T0097804.1 MGP_NODShiLtJ_G0036216.1 mouse_genomes_project 3 177224403 177224485 + pseudogene pseudogene MGP_NODShiLtJ_T0013797.1 MGP_NODShiLtJ_G0011905.1 mouse_genomes_project 3 8962355 8962534 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060172.1 MGP_NODShiLtJ_G0026968.1 mouse_genomes_project 3 38796986 38843609 - MGP_NODShiLtJ_P0060172 Ccdc144b protein_coding protein_coding MGP_NODShiLtJ_T0060173.1 MGP_NODShiLtJ_G0026968.1 mouse_genomes_project 3 38800908 38843594 - MGP_NODShiLtJ_P0060173 Ccdc144b protein_coding protein_coding MGP_NODShiLtJ_T0060174.1 MGP_NODShiLtJ_G0026968.1 mouse_genomes_project 3 38805944 38843594 - MGP_NODShiLtJ_P0060174 Ccdc144b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001209.1 MGP_NODShiLtJ_G0001130.1 mouse_genomes_project 3 75938845 75940685 + TEC TEC MGP_NODShiLtJ_T0014009.1 MGP_NODShiLtJ_G0012117.1 mouse_genomes_project 3 89560343 89560784 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061833.1 MGP_NODShiLtJ_G0027336.1 mouse_genomes_project 3 106390939 106394248 - MGP_NODShiLtJ_P0061833 protein_coding protein_coding MGP_NODShiLtJ_T0013913.1 MGP_NODShiLtJ_G0012021.1 mouse_genomes_project 3 55778287 55778822 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010428.1 MGP_NODShiLtJ_G0008561.1 mouse_genomes_project 3 103087606 103087664 - Mir7669 miRNA miRNA MGP_NODShiLtJ_T0062348.1 MGP_NODShiLtJ_G0027458.1 mouse_genomes_project 3 111908662 111962125 - MGP_NODShiLtJ_P0062348 Chd1l protein_coding protein_coding MGP_NODShiLtJ_T0062349.1 MGP_NODShiLtJ_G0027458.1 mouse_genomes_project 3 111908935 111962093 - MGP_NODShiLtJ_P0062349 Chd1l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062350.1 MGP_NODShiLtJ_G0027458.1 mouse_genomes_project 3 111912958 111917134 - Chd1l protein_coding retained_intron MGP_NODShiLtJ_T0062351.1 MGP_NODShiLtJ_G0027458.1 mouse_genomes_project 3 111921056 111962114 - Chd1l protein_coding retained_intron MGP_NODShiLtJ_T0100497.1 MGP_NODShiLtJ_G0038891.1 mouse_genomes_project 3 153937005 153937137 - Gm23011 snoRNA snoRNA MGP_NODShiLtJ_T0063416.1 MGP_NODShiLtJ_G0027689.1 mouse_genomes_project 3 149813183 149819716 - MGP_NODShiLtJ_P0063416 Gar1 protein_coding protein_coding MGP_NODShiLtJ_T0063417.1 MGP_NODShiLtJ_G0027689.1 mouse_genomes_project 3 149813187 149817692 - MGP_NODShiLtJ_P0063417 Gar1 protein_coding protein_coding MGP_NODShiLtJ_T0063418.1 MGP_NODShiLtJ_G0027689.1 mouse_genomes_project 3 149813190 149813940 - Gar1 protein_coding retained_intron MGP_NODShiLtJ_T0063419.1 MGP_NODShiLtJ_G0027689.1 mouse_genomes_project 3 149813817 149815552 - Gar1 protein_coding retained_intron MGP_NODShiLtJ_T0063420.1 MGP_NODShiLtJ_G0027689.1 mouse_genomes_project 3 149813836 149819680 - Gar1 protein_coding processed_transcript MGP_NODShiLtJ_T0063421.1 MGP_NODShiLtJ_G0027689.1 mouse_genomes_project 3 149815113 149819253 - MGP_NODShiLtJ_P0063421 Gar1 protein_coding protein_coding MGP_NODShiLtJ_T0013771.1 MGP_NODShiLtJ_G0011879.1 mouse_genomes_project 3 1091475 1091794 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061426.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102136877 102150566 + MGP_NODShiLtJ_P0061426 Clk2 protein_coding protein_coding MGP_NODShiLtJ_T0061427.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102136899 102139287 + MGP_NODShiLtJ_P0061427 Clk2 protein_coding protein_coding MGP_NODShiLtJ_T0061428.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102136900 102150566 + MGP_NODShiLtJ_P0061428 Clk2 protein_coding protein_coding MGP_NODShiLtJ_T0061429.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102136901 102150564 + Clk2 protein_coding retained_intron MGP_NODShiLtJ_T0061430.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102136901 102147102 + MGP_NODShiLtJ_P0061430 Clk2 protein_coding protein_coding MGP_NODShiLtJ_T0061431.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102136922 102150566 + MGP_NODShiLtJ_P0061431 Clk2 protein_coding protein_coding MGP_NODShiLtJ_T0061432.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102137061 102150566 + MGP_NODShiLtJ_P0061432 Clk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061433.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102139246 102144263 + Clk2 protein_coding retained_intron MGP_NODShiLtJ_T0061434.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102145809 102149725 + Clk2 protein_coding retained_intron MGP_NODShiLtJ_T0061435.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102147599 102149392 + Clk2 protein_coding retained_intron MGP_NODShiLtJ_T0061436.1 MGP_NODShiLtJ_G0027233.1 mouse_genomes_project 3 102148679 102149616 + Clk2 protein_coding processed_transcript MGP_NODShiLtJ_T0061773.1 MGP_NODShiLtJ_G0027290.1 mouse_genomes_project 3 103787722 103791712 + MGP_NODShiLtJ_P0061773 Gm42674 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063777.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164643131 164755407 - MGP_NODShiLtJ_P0063777 Pkn2 protein_coding protein_coding MGP_NODShiLtJ_T0063778.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164650168 164755318 - MGP_NODShiLtJ_P0063778 Pkn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063779.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164650270 164753842 - MGP_NODShiLtJ_P0063779 Pkn2 protein_coding protein_coding MGP_NODShiLtJ_T0063780.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164650270 164753842 - MGP_NODShiLtJ_P0063780 Pkn2 protein_coding protein_coding MGP_NODShiLtJ_T0063781.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164656391 164755323 - Pkn2 protein_coding processed_transcript MGP_NODShiLtJ_T0063782.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164656473 164659737 - Pkn2 protein_coding retained_intron MGP_NODShiLtJ_T0063783.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164661243 164755393 - Pkn2 protein_coding processed_transcript MGP_NODShiLtJ_T0063784.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164665893 164678466 - MGP_NODShiLtJ_P0063784 Pkn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063785.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164667010 164668834 - Pkn2 protein_coding retained_intron MGP_NODShiLtJ_T0063786.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164667804 164688181 - MGP_NODShiLtJ_P0063786 Pkn2 protein_coding protein_coding MGP_NODShiLtJ_T0063787.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164678176 164688144 - Pkn2 protein_coding retained_intron MGP_NODShiLtJ_T0063788.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164689469 164755386 - Pkn2 protein_coding retained_intron MGP_NODShiLtJ_T0063789.1 MGP_NODShiLtJ_G0027762.1 mouse_genomes_project 3 164707788 164710580 - Pkn2 protein_coding retained_intron MGP_NODShiLtJ_T0013845.1 MGP_NODShiLtJ_G0011953.1 mouse_genomes_project 3 26771944 26772124 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060654.1 MGP_NODShiLtJ_G0027060.1 mouse_genomes_project 3 66918540 66950308 + MGP_NODShiLtJ_P0060654 Gm5538 protein_coding protein_coding MGP_NODShiLtJ_T0099163.1 MGP_NODShiLtJ_G0037557.1 mouse_genomes_project 3 50552012 50552175 + Gm25796 snRNA snRNA MGP_NODShiLtJ_T0062399.1 MGP_NODShiLtJ_G0027475.1 mouse_genomes_project 3 113235541 113237589 - MGP_NODShiLtJ_P0062399 protein_coding protein_coding MGP_NODShiLtJ_T0001163.1 MGP_NODShiLtJ_G0001086.1 mouse_genomes_project 3 57888430 57888972 + TEC TEC MGP_NODShiLtJ_T0007601.1 MGP_NODShiLtJ_G0006213.1 mouse_genomes_project 3 123944346 123946286 + lincRNA lincRNA MGP_NODShiLtJ_T0007634.1 MGP_NODShiLtJ_G0006238.1 mouse_genomes_project 3 148533305 148535225 - 4933424H11Rik lincRNA lincRNA MGP_NODShiLtJ_T0004243.1 MGP_NODShiLtJ_G0003719.1 mouse_genomes_project 3 109994189 110011290 + C920021L13Rik antisense antisense MGP_NODShiLtJ_T0004244.1 MGP_NODShiLtJ_G0003719.1 mouse_genomes_project 3 109994192 110012435 + C920021L13Rik antisense antisense MGP_NODShiLtJ_T0004245.1 MGP_NODShiLtJ_G0003719.1 mouse_genomes_project 3 109994198 109998007 + C920021L13Rik antisense antisense MGP_NODShiLtJ_T0061834.1 MGP_NODShiLtJ_G0027337.1 mouse_genomes_project 3 106415254 106417777 - MGP_NODShiLtJ_P0061834 Lce1j protein_coding protein_coding MGP_NODShiLtJ_T0061835.1 MGP_NODShiLtJ_G0027337.1 mouse_genomes_project 3 106415464 106416732 - MGP_NODShiLtJ_P0061835 Lce1j protein_coding protein_coding MGP_NODShiLtJ_T0062871.1 MGP_NODShiLtJ_G0027589.1 mouse_genomes_project 3 123830998 123854299 + MGP_NODShiLtJ_P0062871 Psma5 protein_coding protein_coding MGP_NODShiLtJ_T0062872.1 MGP_NODShiLtJ_G0027589.1 mouse_genomes_project 3 123843199 123854221 + MGP_NODShiLtJ_P0062872 Psma5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100456.1 MGP_NODShiLtJ_G0038850.1 mouse_genomes_project 3 76033654 76033786 - Gm25919 snoRNA snoRNA MGP_NODShiLtJ_T0014144.1 MGP_NODShiLtJ_G0012252.1 mouse_genomes_project 3 133226589 133227025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100491.1 MGP_NODShiLtJ_G0038885.1 mouse_genomes_project 3 142351968 142352098 - Snora24 snoRNA snoRNA MGP_NODShiLtJ_T0100440.1 MGP_NODShiLtJ_G0038834.1 mouse_genomes_project 3 35908741 35908884 - Gm24780 snoRNA snoRNA MGP_NODShiLtJ_T0007506.1 MGP_NODShiLtJ_G0006141.1 mouse_genomes_project 3 77719743 77751685 + Gm1647 lincRNA lincRNA MGP_NODShiLtJ_T0062260.1 MGP_NODShiLtJ_G0027437.1 mouse_genomes_project 3 110776960 110780642 + MGP_NODShiLtJ_P0062260 Gm16253 protein_coding protein_coding MGP_NODShiLtJ_T0062397.1 MGP_NODShiLtJ_G0027473.1 mouse_genomes_project 3 113085609 113099394 - MGP_NODShiLtJ_P0062397 protein_coding protein_coding MGP_NODShiLtJ_T0007505.1 MGP_NODShiLtJ_G0006140.1 mouse_genomes_project 3 77311924 77313118 + Gm35584 lincRNA lincRNA MGP_NODShiLtJ_T0063150.1 MGP_NODShiLtJ_G0027644.1 mouse_genomes_project 3 139912491 139943156 + MGP_NODShiLtJ_P0063150 Alg14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063151.1 MGP_NODShiLtJ_G0027644.1 mouse_genomes_project 3 139912541 139997290 + MGP_NODShiLtJ_P0063151 Alg14 protein_coding protein_coding MGP_NODShiLtJ_T0063152.1 MGP_NODShiLtJ_G0027644.1 mouse_genomes_project 3 139912583 139943618 + MGP_NODShiLtJ_P0063152 Alg14 protein_coding protein_coding MGP_NODShiLtJ_T0060976.1 MGP_NODShiLtJ_G0027140.1 mouse_genomes_project 3 94158333 94201802 - MGP_NODShiLtJ_P0060976 Gucy1b3 protein_coding protein_coding MGP_NODShiLtJ_T0060977.1 MGP_NODShiLtJ_G0027140.1 mouse_genomes_project 3 94160647 94161659 - Gucy1b3 protein_coding retained_intron MGP_NODShiLtJ_T0060978.1 MGP_NODShiLtJ_G0027140.1 mouse_genomes_project 3 94177391 94201901 - Gucy1b3 protein_coding processed_transcript MGP_NODShiLtJ_T0060979.1 MGP_NODShiLtJ_G0027141.1 mouse_genomes_project 3 94222085 94277472 - MGP_NODShiLtJ_P0060979 Gucy1a3 protein_coding protein_coding MGP_NODShiLtJ_T0060980.1 MGP_NODShiLtJ_G0027141.1 mouse_genomes_project 3 94222095 94278186 - MGP_NODShiLtJ_P0060980 Gucy1a3 protein_coding protein_coding MGP_NODShiLtJ_T0060981.1 MGP_NODShiLtJ_G0027141.1 mouse_genomes_project 3 94224210 94231650 - MGP_NODShiLtJ_P0060981 Gucy1a3 protein_coding protein_coding MGP_NODShiLtJ_T0060982.1 MGP_NODShiLtJ_G0027141.1 mouse_genomes_project 3 94237439 94278188 - Gucy1a3 protein_coding retained_intron MGP_NODShiLtJ_T0060983.1 MGP_NODShiLtJ_G0027141.1 mouse_genomes_project 3 94249810 94278004 - Gucy1a3 protein_coding processed_transcript MGP_NODShiLtJ_T0010459.1 MGP_NODShiLtJ_G0008592.1 mouse_genomes_project 3 158725763 158725844 - Mir6380 miRNA miRNA MGP_NODShiLtJ_T0100475.1 MGP_NODShiLtJ_G0038869.1 mouse_genomes_project 3 110327474 110327603 + Gm22027 snoRNA snoRNA MGP_NODShiLtJ_T0013930.1 MGP_NODShiLtJ_G0012038.1 mouse_genomes_project 3 60547365 60547773 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007401.1 MGP_NODShiLtJ_G0006060.1 mouse_genomes_project 3 13018616 13021307 - Gm2464 lincRNA lincRNA MGP_NODShiLtJ_T0099214.1 MGP_NODShiLtJ_G0037608.1 mouse_genomes_project 3 124088147 124088270 + Gm23336 snRNA snRNA MGP_NODShiLtJ_T0059702.1 MGP_NODShiLtJ_G0026864.1 mouse_genomes_project 3 5723442 5776094 + MGP_NODShiLtJ_P0059702 Zc2hc1a protein_coding protein_coding MGP_NODShiLtJ_T0059703.1 MGP_NODShiLtJ_G0026864.1 mouse_genomes_project 3 5723445 5774336 + MGP_NODShiLtJ_P0059703 Zc2hc1a protein_coding protein_coding MGP_NODShiLtJ_T0059704.1 MGP_NODShiLtJ_G0026864.1 mouse_genomes_project 3 5762026 5773761 + Zc2hc1a protein_coding retained_intron MGP_NODShiLtJ_T0007718.1 MGP_NODShiLtJ_G0006305.1 mouse_genomes_project 3 177234234 177237009 - 5730460C07Rik lincRNA lincRNA MGP_NODShiLtJ_T0014198.1 MGP_NODShiLtJ_G0012306.1 mouse_genomes_project 3 155593561 155594015 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007572.1 MGP_NODShiLtJ_G0006189.1 mouse_genomes_project 3 113465383 113468991 - 5730437C11Rik lincRNA lincRNA MGP_NODShiLtJ_T0098343.1 MGP_NODShiLtJ_G0036748.1 mouse_genomes_project 3 118904704 118905987 + Gm15472 sense_intronic sense_intronic MGP_NODShiLtJ_T0001168.1 MGP_NODShiLtJ_G0001090.1 mouse_genomes_project 3 58153456 58154477 - TEC TEC MGP_NODShiLtJ_T0060769.1 MGP_NODShiLtJ_G0027089.1 mouse_genomes_project 3 74336680 74585479 - MGP_NODShiLtJ_P0060769 Veph1 protein_coding protein_coding MGP_NODShiLtJ_T0060770.1 MGP_NODShiLtJ_G0027089.1 mouse_genomes_project 3 74339708 74417462 - Veph1 protein_coding processed_transcript MGP_NODShiLtJ_T0060773.1 MGP_NODShiLtJ_G0027089.1 mouse_genomes_project 3 74535325 74585390 - Veph1 protein_coding retained_intron MGP_NODShiLtJ_T0062261.1 MGP_NODShiLtJ_G0027438.1 mouse_genomes_project 3 110778371 110781653 - Polr3gl protein_coding retained_intron MGP_NODShiLtJ_T0062262.1 MGP_NODShiLtJ_G0027438.1 mouse_genomes_project 3 110778379 110780134 - Polr3gl protein_coding retained_intron MGP_NODShiLtJ_T0062263.1 MGP_NODShiLtJ_G0027438.1 mouse_genomes_project 3 110778479 110784166 - MGP_NODShiLtJ_P0062263 Polr3gl protein_coding protein_coding MGP_NODShiLtJ_T0062417.1 MGP_NODShiLtJ_G0027482.1 mouse_genomes_project 3 114807382 114878327 - MGP_NODShiLtJ_P0062417 Wdr3 protein_coding protein_coding MGP_NODShiLtJ_T0062418.1 MGP_NODShiLtJ_G0027482.1 mouse_genomes_project 3 114807937 114810824 - Wdr3 protein_coding retained_intron MGP_NODShiLtJ_T0062419.1 MGP_NODShiLtJ_G0027482.1 mouse_genomes_project 3 114811701 114878327 - Wdr3 protein_coding retained_intron MGP_NODShiLtJ_T0062420.1 MGP_NODShiLtJ_G0027482.1 mouse_genomes_project 3 114811703 114812785 - Wdr3 protein_coding retained_intron MGP_NODShiLtJ_T0062421.1 MGP_NODShiLtJ_G0027482.1 mouse_genomes_project 3 114827617 114878252 - MGP_NODShiLtJ_P0062421 Wdr3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062422.1 MGP_NODShiLtJ_G0027482.1 mouse_genomes_project 3 114827617 114878317 - MGP_NODShiLtJ_P0062422 Wdr3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004197.1 MGP_NODShiLtJ_G0003686.1 mouse_genomes_project 3 68913247 68916777 - Gm37696 antisense antisense MGP_NODShiLtJ_T0013962.1 MGP_NODShiLtJ_G0012070.1 mouse_genomes_project 3 71764586 71765533 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061115.1 MGP_NODShiLtJ_G0027177.1 mouse_genomes_project 3 100058137 100074491 + MGP_NODShiLtJ_P0061115 Fcrl1 protein_coding protein_coding MGP_NODShiLtJ_T0061116.1 MGP_NODShiLtJ_G0027177.1 mouse_genomes_project 3 100058139 100074884 + MGP_NODShiLtJ_P0061116 Fcrl1 protein_coding protein_coding MGP_NODShiLtJ_T0061117.1 MGP_NODShiLtJ_G0027177.1 mouse_genomes_project 3 100058198 100074885 + MGP_NODShiLtJ_P0061117 Fcrl1 protein_coding protein_coding MGP_NODShiLtJ_T0061118.1 MGP_NODShiLtJ_G0027177.1 mouse_genomes_project 3 100058210 100088781 + MGP_NODShiLtJ_P0061118 Fcrl1 protein_coding protein_coding MGP_NODShiLtJ_T0061119.1 MGP_NODShiLtJ_G0027177.1 mouse_genomes_project 3 100058217 100074505 + MGP_NODShiLtJ_P0061119 Fcrl1 protein_coding protein_coding MGP_NODShiLtJ_T0061120.1 MGP_NODShiLtJ_G0027177.1 mouse_genomes_project 3 100058245 100074042 + MGP_NODShiLtJ_P0061120 Fcrl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061121.1 MGP_NODShiLtJ_G0027177.1 mouse_genomes_project 3 100067319 100074849 + Fcrl1 protein_coding retained_intron MGP_NODShiLtJ_T0001128.1 MGP_NODShiLtJ_G0001051.1 mouse_genomes_project 3 40470152 40479456 + TEC TEC MGP_NODShiLtJ_T0099197.1 MGP_NODShiLtJ_G0037591.1 mouse_genomes_project 3 103036330 103036495 - Gm24046 snRNA snRNA MGP_NODShiLtJ_T0062364.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112052366 112269799 - MGP_NODShiLtJ_P0062364 Pde4dip protein_coding protein_coding MGP_NODShiLtJ_T0062365.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112052372 112057578 - Pde4dip protein_coding processed_transcript MGP_NODShiLtJ_T0062366.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112052407 112269799 - MGP_NODShiLtJ_P0062366 Pde4dip protein_coding protein_coding MGP_NODShiLtJ_T0062367.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112057535 112059821 - Pde4dip protein_coding processed_transcript MGP_NODShiLtJ_T0062368.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112101851 112130871 - MGP_NODShiLtJ_P0062368 Pde4dip protein_coding protein_coding MGP_NODShiLtJ_T0062369.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112103814 112130793 - MGP_NODShiLtJ_P0062369 Pde4dip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062370.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112109621 112249911 - MGP_NODShiLtJ_P0062370 Pde4dip protein_coding protein_coding MGP_NODShiLtJ_T0062371.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112161796 112201602 - MGP_NODShiLtJ_P0062371 Pde4dip protein_coding protein_coding MGP_NODShiLtJ_T0062372.1 MGP_NODShiLtJ_G0027462.1 mouse_genomes_project 3 112198020 112249860 - Pde4dip protein_coding retained_intron MGP_NODShiLtJ_T0063731.1 MGP_NODShiLtJ_G0027752.1 mouse_genomes_project 3 163111583 163523434 + MGP_NODShiLtJ_P0063731 Unc5c protein_coding protein_coding MGP_NODShiLtJ_T0063732.1 MGP_NODShiLtJ_G0027752.1 mouse_genomes_project 3 163111941 163517976 + MGP_NODShiLtJ_P0063732 Unc5c protein_coding protein_coding MGP_NODShiLtJ_T0063733.1 MGP_NODShiLtJ_G0027752.1 mouse_genomes_project 3 163111966 163337631 + Unc5c protein_coding processed_transcript MGP_NODShiLtJ_T0063734.1 MGP_NODShiLtJ_G0027752.1 mouse_genomes_project 3 163111966 163117309 + Unc5c protein_coding retained_intron MGP_NODShiLtJ_T0063735.1 MGP_NODShiLtJ_G0027752.1 mouse_genomes_project 3 163111966 163362443 + Unc5c protein_coding retained_intron MGP_NODShiLtJ_T0063736.1 MGP_NODShiLtJ_G0027752.1 mouse_genomes_project 3 163111966 163517928 + MGP_NODShiLtJ_P0063736 Unc5c protein_coding protein_coding MGP_NODShiLtJ_T0063737.1 MGP_NODShiLtJ_G0027752.1 mouse_genomes_project 3 163112038 163519045 + MGP_NODShiLtJ_P0063737 Unc5c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063738.1 MGP_NODShiLtJ_G0027752.1 mouse_genomes_project 3 163477768 163479914 + Unc5c protein_coding retained_intron MGP_NODShiLtJ_T0007536.1 MGP_NODShiLtJ_G0006166.1 mouse_genomes_project 3 98627053 98629842 + Gm37933 lincRNA lincRNA MGP_NODShiLtJ_T0014055.1 MGP_NODShiLtJ_G0012163.1 mouse_genomes_project 3 106982595 106983421 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004198.1 MGP_NODShiLtJ_G0003687.1 mouse_genomes_project 3 70075900 70078909 - 9330121J05Rik antisense antisense MGP_NODShiLtJ_T0011427.1 MGP_NODShiLtJ_G0009560.1 mouse_genomes_project 3 37301300 37301408 + Gm27611 misc_RNA misc_RNA MGP_NODShiLtJ_T0060191.1 MGP_NODShiLtJ_G0026974.1 mouse_genomes_project 3 39395518 39408517 + MGP_NODShiLtJ_P0060191 Exosc9 protein_coding protein_coding MGP_NODShiLtJ_T0060192.1 MGP_NODShiLtJ_G0026974.1 mouse_genomes_project 3 39395518 39406044 + MGP_NODShiLtJ_P0060192 Exosc9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060193.1 MGP_NODShiLtJ_G0026974.1 mouse_genomes_project 3 39395526 39399685 + Exosc9 protein_coding retained_intron MGP_NODShiLtJ_T0060194.1 MGP_NODShiLtJ_G0026974.1 mouse_genomes_project 3 39395539 39399902 + Exosc9 protein_coding retained_intron MGP_NODShiLtJ_T0060195.1 MGP_NODShiLtJ_G0026974.1 mouse_genomes_project 3 39395550 39399856 + MGP_NODShiLtJ_P0060195 Exosc9 protein_coding protein_coding MGP_NODShiLtJ_T0060196.1 MGP_NODShiLtJ_G0026974.1 mouse_genomes_project 3 39395563 39404287 + Exosc9 protein_coding retained_intron MGP_NODShiLtJ_T0060197.1 MGP_NODShiLtJ_G0026974.1 mouse_genomes_project 3 39398461 39406019 + MGP_NODShiLtJ_P0060197 Exosc9 protein_coding protein_coding MGP_NODShiLtJ_T0060198.1 MGP_NODShiLtJ_G0026974.1 mouse_genomes_project 3 39405074 39408435 + MGP_NODShiLtJ_P0060198 Exosc9 protein_coding protein_coding MGP_NODShiLtJ_T0061538.1 MGP_NODShiLtJ_G0027249.1 mouse_genomes_project 3 102361023 102366754 + MGP_NODShiLtJ_P0061538 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0013872.1 MGP_NODShiLtJ_G0011980.1 mouse_genomes_project 3 39683376 39683983 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007414.1 MGP_NODShiLtJ_G0006068.1 mouse_genomes_project 3 21135341 21138221 + lincRNA lincRNA MGP_NODShiLtJ_T0061204.1 MGP_NODShiLtJ_G0027194.1 mouse_genomes_project 3 100753512 100759327 - Hapln2 protein_coding retained_intron MGP_NODShiLtJ_T0061205.1 MGP_NODShiLtJ_G0027194.1 mouse_genomes_project 3 100753823 100759222 - MGP_NODShiLtJ_P0061205 Hapln2 protein_coding protein_coding MGP_NODShiLtJ_T0061206.1 MGP_NODShiLtJ_G0027194.1 mouse_genomes_project 3 100754400 100755436 - Hapln2 protein_coding retained_intron MGP_NODShiLtJ_T0061207.1 MGP_NODShiLtJ_G0027194.1 mouse_genomes_project 3 100755296 100759236 - MGP_NODShiLtJ_P0061207 Hapln2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060937.1 MGP_NODShiLtJ_G0027131.1 mouse_genomes_project 3 91351055 91467381 - MGP_NODShiLtJ_P0060937 Rxfp1 protein_coding protein_coding MGP_NODShiLtJ_T0060938.1 MGP_NODShiLtJ_G0027131.1 mouse_genomes_project 3 91353554 91467467 - MGP_NODShiLtJ_P0060938 Rxfp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060939.1 MGP_NODShiLtJ_G0027131.1 mouse_genomes_project 3 91361090 91362973 - Rxfp1 protein_coding retained_intron MGP_NODShiLtJ_T0060940.1 MGP_NODShiLtJ_G0027131.1 mouse_genomes_project 3 91364754 91382785 - Rxfp1 protein_coding processed_transcript MGP_NODShiLtJ_T0007424.1 MGP_NODShiLtJ_G0006078.1 mouse_genomes_project 3 32021273 32163356 - Gm33206 lincRNA lincRNA MGP_NODShiLtJ_T0014016.1 MGP_NODShiLtJ_G0012124.1 mouse_genomes_project 3 91834941 91836029 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014194.1 MGP_NODShiLtJ_G0012302.1 mouse_genomes_project 3 153927441 153927716 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014195.1 MGP_NODShiLtJ_G0012303.1 mouse_genomes_project 3 154642783 154643224 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017829.1 MGP_NODShiLtJ_G0015382.1 mouse_genomes_project 3 118839323 118844691 + Gm15471 processed_transcript retained_intron MGP_NODShiLtJ_T0017830.1 MGP_NODShiLtJ_G0015382.1 mouse_genomes_project 3 118839330 118844692 + Gm15471 processed_transcript antisense MGP_NODShiLtJ_T0001217.1 MGP_NODShiLtJ_G0001138.1 mouse_genomes_project 3 87545175 87548549 + TEC TEC MGP_NODShiLtJ_T0099206.1 MGP_NODShiLtJ_G0037600.1 mouse_genomes_project 3 110649165 110649888 + Rnu1b6 snRNA snRNA MGP_NODShiLtJ_T0062249.1 MGP_NODShiLtJ_G0027433.1 mouse_genomes_project 3 110429801 110443855 - MGP_NODShiLtJ_P0062249 protein_coding protein_coding MGP_NODShiLtJ_T0062250.1 MGP_NODShiLtJ_G0027433.1 mouse_genomes_project 3 110432994 110443819 - MGP_NODShiLtJ_P0062250 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099187.1 MGP_NODShiLtJ_G0037581.1 mouse_genomes_project 3 98432185 98432247 - Gm24501 snRNA snRNA MGP_NODShiLtJ_T0061692.1 MGP_NODShiLtJ_G0027275.1 mouse_genomes_project 3 103392630 103402589 + MGP_NODShiLtJ_P0061692 Crtc2 protein_coding protein_coding MGP_NODShiLtJ_T0061693.1 MGP_NODShiLtJ_G0027275.1 mouse_genomes_project 3 103392763 103402584 + Crtc2 protein_coding retained_intron MGP_NODShiLtJ_T0061694.1 MGP_NODShiLtJ_G0027275.1 mouse_genomes_project 3 103392763 103402584 + Crtc2 protein_coding retained_intron MGP_NODShiLtJ_T0061695.1 MGP_NODShiLtJ_G0027275.1 mouse_genomes_project 3 103392791 103397097 + Crtc2 protein_coding retained_intron MGP_NODShiLtJ_T0061696.1 MGP_NODShiLtJ_G0027275.1 mouse_genomes_project 3 103392808 103402584 + Crtc2 protein_coding processed_transcript MGP_NODShiLtJ_T0061697.1 MGP_NODShiLtJ_G0027275.1 mouse_genomes_project 3 103395756 103402584 + MGP_NODShiLtJ_P0061697 Crtc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061698.1 MGP_NODShiLtJ_G0027275.1 mouse_genomes_project 3 103396512 103397956 + Crtc2 protein_coding retained_intron MGP_NODShiLtJ_T0061699.1 MGP_NODShiLtJ_G0027275.1 mouse_genomes_project 3 103397428 103398785 + Crtc2 protein_coding retained_intron MGP_NODShiLtJ_T0062664.1 MGP_NODShiLtJ_G0027532.1 mouse_genomes_project 3 120178798 120238185 - MGP_NODShiLtJ_P0062664 Cttnbp2nl protein_coding protein_coding MGP_NODShiLtJ_T0062665.1 MGP_NODShiLtJ_G0027532.1 mouse_genomes_project 3 120178800 120237990 - MGP_NODShiLtJ_P0062665 Cttnbp2nl protein_coding protein_coding MGP_NODShiLtJ_T0062666.1 MGP_NODShiLtJ_G0027532.1 mouse_genomes_project 3 120182948 120237993 - MGP_NODShiLtJ_P0062666 Cttnbp2nl protein_coding protein_coding MGP_NODShiLtJ_T0062667.1 MGP_NODShiLtJ_G0027532.1 mouse_genomes_project 3 120182978 120237964 - Cttnbp2nl protein_coding retained_intron MGP_NODShiLtJ_T0061796.1 MGP_NODShiLtJ_G0027304.1 mouse_genomes_project 3 105793708 105798386 + MGP_NODShiLtJ_P0061796 protein_coding protein_coding MGP_NODShiLtJ_T0004354.1 MGP_NODShiLtJ_G0003792.1 mouse_genomes_project 3 177370553 177374317 + Gm43400 antisense antisense MGP_NODShiLtJ_T0064128.1 MGP_NODShiLtJ_G0027821.1 mouse_genomes_project 3 178189269 178296020 + MGP_NODShiLtJ_P0064128 protein_coding protein_coding MGP_NODShiLtJ_T0064129.1 MGP_NODShiLtJ_G0027821.1 mouse_genomes_project 3 178239384 178277082 + MGP_NODShiLtJ_P0064129 protein_coding protein_coding MGP_NODShiLtJ_T0064130.1 MGP_NODShiLtJ_G0027821.1 mouse_genomes_project 3 178292561 178296017 + MGP_NODShiLtJ_P0064130 protein_coding protein_coding MGP_NODShiLtJ_T0001145.1 MGP_NODShiLtJ_G0001068.1 mouse_genomes_project 3 50053644 50056782 + TEC TEC MGP_NODShiLtJ_T0062567.1 MGP_NODShiLtJ_G0027513.1 mouse_genomes_project 3 118775173 118782184 + MGP_NODShiLtJ_P0062567 Gm10964 protein_coding protein_coding MGP_NODShiLtJ_T0062212.1 MGP_NODShiLtJ_G0027420.1 mouse_genomes_project 3 110126510 110133316 - MGP_NODShiLtJ_P0062212 Plekho1 protein_coding protein_coding MGP_NODShiLtJ_T0062213.1 MGP_NODShiLtJ_G0027420.1 mouse_genomes_project 3 110126532 110136048 - MGP_NODShiLtJ_P0062213 Plekho1 protein_coding protein_coding MGP_NODShiLtJ_T0062214.1 MGP_NODShiLtJ_G0027420.1 mouse_genomes_project 3 110127085 110133370 - MGP_NODShiLtJ_P0062214 Plekho1 protein_coding protein_coding MGP_NODShiLtJ_T0062215.1 MGP_NODShiLtJ_G0027420.1 mouse_genomes_project 3 110129150 110133447 - MGP_NODShiLtJ_P0062215 Plekho1 protein_coding protein_coding MGP_NODShiLtJ_T0062216.1 MGP_NODShiLtJ_G0027420.1 mouse_genomes_project 3 110132982 110133316 - Plekho1 protein_coding retained_intron MGP_NODShiLtJ_T0061867.1 MGP_NODShiLtJ_G0027360.1 mouse_genomes_project 3 107756813 107759056 - MGP_NODShiLtJ_P0061867 protein_coding protein_coding MGP_NODShiLtJ_T0061869.1 MGP_NODShiLtJ_G0027360.1 mouse_genomes_project 3 107756820 107759032 - MGP_NODShiLtJ_P0061869 protein_coding protein_coding MGP_NODShiLtJ_T0004220.1 MGP_NODShiLtJ_G0003702.1 mouse_genomes_project 3 101470652 101475240 - Gm20652 antisense antisense MGP_NODShiLtJ_T0059743.1 MGP_NODShiLtJ_G0026878.1 mouse_genomes_project 3 8842378 8846867 - MGP_NODShiLtJ_P0059743 Fabp4 protein_coding protein_coding MGP_NODShiLtJ_T0059744.1 MGP_NODShiLtJ_G0026878.1 mouse_genomes_project 3 8842618 8846849 - Fabp4 protein_coding retained_intron MGP_NODShiLtJ_T0001299.1 MGP_NODShiLtJ_G0001220.1 mouse_genomes_project 3 146765928 146769661 - TEC TEC MGP_NODShiLtJ_T0013877.1 MGP_NODShiLtJ_G0011985.1 mouse_genomes_project 3 40542062 40542383 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001255.1 MGP_NODShiLtJ_G0001176.1 mouse_genomes_project 3 123418870 123420753 + TEC TEC MGP_NODShiLtJ_T0060055.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34974976 34985444 + MGP_NODShiLtJ_P0060055 Zfp639 protein_coding protein_coding MGP_NODShiLtJ_T0060056.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34975252 34985354 + MGP_NODShiLtJ_P0060056 Zfp639 protein_coding protein_coding MGP_NODShiLtJ_T0060057.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34975381 34984177 + MGP_NODShiLtJ_P0060057 Zfp639 protein_coding protein_coding MGP_NODShiLtJ_T0060058.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34975613 34977893 + Zfp639 protein_coding processed_transcript MGP_NODShiLtJ_T0060059.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34976895 34984240 + Zfp639 protein_coding retained_intron MGP_NODShiLtJ_T0060060.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34977717 34984179 + MGP_NODShiLtJ_P0060060 Zfp639 protein_coding protein_coding MGP_NODShiLtJ_T0060061.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34979906 34985296 + MGP_NODShiLtJ_P0060061 Zfp639 protein_coding protein_coding MGP_NODShiLtJ_T0060062.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34981691 34985128 + MGP_NODShiLtJ_P0060062 Zfp639 protein_coding protein_coding MGP_NODShiLtJ_T0060063.1 MGP_NODShiLtJ_G0026952.1 mouse_genomes_project 3 34983409 34984171 + Zfp639 protein_coding retained_intron MGP_NODShiLtJ_T0011421.1 MGP_NODShiLtJ_G0009554.1 mouse_genomes_project 3 13751210 13751491 - Gm22026 misc_RNA misc_RNA MGP_NODShiLtJ_T0007604.1 MGP_NODShiLtJ_G0006216.1 mouse_genomes_project 3 133442395 133443973 + Gm9889 lincRNA lincRNA MGP_NODShiLtJ_T0007605.1 MGP_NODShiLtJ_G0006216.1 mouse_genomes_project 3 133442395 133443972 + Gm9889 lincRNA pseudogene MGP_NODShiLtJ_T0017783.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 36714591 36717287 + processed_transcript retained_intron MGP_NODShiLtJ_T0017784.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 36714759 37286538 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017785.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 36714779 37324091 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017786.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 36816479 37286613 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017787.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 36816592 37146587 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017788.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37193830 37323915 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017789.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37193883 37326052 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017790.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37193890 37210018 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017791.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37193894 37286576 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017792.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37194218 37194285 + processed_transcript misc_RNA MGP_NODShiLtJ_T0017793.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37233252 37324055 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017794.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37285298 37326052 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017795.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37286303 37323958 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017796.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37286381 37328910 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017797.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37286426 37328873 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017798.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37286633 37332508 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017799.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37304165 37324207 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0017800.1 MGP_NODShiLtJ_G0015368.1 mouse_genomes_project 3 37313369 37326054 + processed_transcript sense_overlapping MGP_NODShiLtJ_T0001084.1 MGP_NODShiLtJ_G0001007.1 mouse_genomes_project 3 8070702 8074507 + TEC TEC MGP_NODShiLtJ_T0014215.1 MGP_NODShiLtJ_G0012323.1 mouse_genomes_project 3 159521241 159521467 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007609.1 MGP_NODShiLtJ_G0006220.1 mouse_genomes_project 3 134500128 134500552 + 4930512P04Rik lincRNA lincRNA MGP_NODShiLtJ_T0014043.1 MGP_NODShiLtJ_G0012151.1 mouse_genomes_project 3 103923418 103924321 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063848.1 MGP_NODShiLtJ_G0027776.1 mouse_genomes_project 3 167783953 167815023 + MGP_NODShiLtJ_P0063848 Znhit6 protein_coding protein_coding MGP_NODShiLtJ_T0063849.1 MGP_NODShiLtJ_G0027776.1 mouse_genomes_project 3 167783980 167815705 + MGP_NODShiLtJ_P0063849 Znhit6 protein_coding protein_coding MGP_NODShiLtJ_T0063850.1 MGP_NODShiLtJ_G0027776.1 mouse_genomes_project 3 167783995 167786279 + MGP_NODShiLtJ_P0063850 Znhit6 protein_coding protein_coding MGP_NODShiLtJ_T0063851.1 MGP_NODShiLtJ_G0027776.1 mouse_genomes_project 3 167784006 167804988 + MGP_NODShiLtJ_P0063851 Znhit6 protein_coding protein_coding MGP_NODShiLtJ_T0063852.1 MGP_NODShiLtJ_G0027776.1 mouse_genomes_project 3 167784022 167790385 + MGP_NODShiLtJ_P0063852 Znhit6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063853.1 MGP_NODShiLtJ_G0027776.1 mouse_genomes_project 3 167784084 167802289 + MGP_NODShiLtJ_P0063853 Znhit6 protein_coding protein_coding MGP_NODShiLtJ_T0063854.1 MGP_NODShiLtJ_G0027776.1 mouse_genomes_project 3 167806190 167814922 + Znhit6 protein_coding retained_intron MGP_NODShiLtJ_T0061518.1 MGP_NODShiLtJ_G0027246.1 mouse_genomes_project 3 102326075 102330716 - MGP_NODShiLtJ_P0061518 Efna4 protein_coding protein_coding MGP_NODShiLtJ_T0060958.1 MGP_NODShiLtJ_G0027135.1 mouse_genomes_project 3 92754980 92827107 - MGP_NODShiLtJ_P0060958 Glrb protein_coding protein_coding MGP_NODShiLtJ_T0060959.1 MGP_NODShiLtJ_G0027135.1 mouse_genomes_project 3 92754983 92828676 - MGP_NODShiLtJ_P0060959 Glrb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060960.1 MGP_NODShiLtJ_G0027135.1 mouse_genomes_project 3 92765049 92828546 - MGP_NODShiLtJ_P0060960 Glrb protein_coding protein_coding MGP_NODShiLtJ_T0060961.1 MGP_NODShiLtJ_G0027135.1 mouse_genomes_project 3 92765056 92767163 - Glrb protein_coding retained_intron MGP_NODShiLtJ_T0060962.1 MGP_NODShiLtJ_G0027135.1 mouse_genomes_project 3 92774445 92828607 - MGP_NODShiLtJ_P0060962 Glrb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098492.1 MGP_NODShiLtJ_G0036887.1 mouse_genomes_project 3 178182109 178206185 + Gm38139 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0017855.1 MGP_NODShiLtJ_G0015390.1 mouse_genomes_project 3 140997677 141006409 - processed_transcript retained_intron MGP_NODShiLtJ_T0061882.1 MGP_NODShiLtJ_G0027366.1 mouse_genomes_project 3 108286851 108292823 + MGP_NODShiLtJ_P0061882 Lingo4 protein_coding protein_coding MGP_NODShiLtJ_T0060386.1 MGP_NODShiLtJ_G0027003.1 mouse_genomes_project 3 55902707 55916670 - MGP_NODShiLtJ_P0060386 Pcdh18 protein_coding protein_coding MGP_NODShiLtJ_T0060387.1 MGP_NODShiLtJ_G0027003.1 mouse_genomes_project 3 55902709 55916639 - MGP_NODShiLtJ_P0060387 Pcdh18 protein_coding protein_coding MGP_NODShiLtJ_T0060388.1 MGP_NODShiLtJ_G0027003.1 mouse_genomes_project 3 55904689 55916679 - Pcdh18 protein_coding processed_transcript MGP_NODShiLtJ_T0060389.1 MGP_NODShiLtJ_G0027003.1 mouse_genomes_project 3 55911770 55914819 - MGP_NODShiLtJ_P0060389 Pcdh18 protein_coding protein_coding MGP_NODShiLtJ_T0060390.1 MGP_NODShiLtJ_G0027003.1 mouse_genomes_project 3 55914180 55916637 - Pcdh18 protein_coding processed_transcript MGP_NODShiLtJ_T0063394.1 MGP_NODShiLtJ_G0027685.1 mouse_genomes_project 3 149499177 149601042 + MGP_NODShiLtJ_P0063394 Elovl6 protein_coding protein_coding MGP_NODShiLtJ_T0063395.1 MGP_NODShiLtJ_G0027685.1 mouse_genomes_project 3 149519537 149595873 + MGP_NODShiLtJ_P0063395 Elovl6 protein_coding protein_coding MGP_NODShiLtJ_T0098198.1 MGP_NODShiLtJ_G0036610.1 mouse_genomes_project 3 101556921 101557048 + Gm25820 scaRNA scaRNA MGP_NODShiLtJ_T0061818.1 MGP_NODShiLtJ_G0027323.1 mouse_genomes_project 3 106174804 106177150 - MGP_NODShiLtJ_P0061818 Smcp protein_coding protein_coding MGP_NODShiLtJ_T0061819.1 MGP_NODShiLtJ_G0027323.1 mouse_genomes_project 3 106174804 106179922 - MGP_NODShiLtJ_P0061819 Smcp protein_coding protein_coding MGP_NODShiLtJ_T0061783.1 MGP_NODShiLtJ_G0027295.1 mouse_genomes_project 3 103869038 103870103 + MGP_NODShiLtJ_P0061783 S100a8 protein_coding protein_coding MGP_NODShiLtJ_T0061784.1 MGP_NODShiLtJ_G0027295.1 mouse_genomes_project 3 103869372 103870032 + S100a8 protein_coding retained_intron MGP_NODShiLtJ_T0007690.1 MGP_NODShiLtJ_G0006286.1 mouse_genomes_project 3 166293157 166294692 + Gm43447 lincRNA lincRNA MGP_NODShiLtJ_T0100463.1 MGP_NODShiLtJ_G0038857.1 mouse_genomes_project 3 98419237 98419356 + Gm25876 snoRNA snoRNA MGP_NODShiLtJ_T0004240.1 MGP_NODShiLtJ_G0003718.1 mouse_genomes_project 3 109308973 109316980 - 6330562C20Rik antisense antisense MGP_NODShiLtJ_T0004241.1 MGP_NODShiLtJ_G0003718.1 mouse_genomes_project 3 109309562 109317029 - 6330562C20Rik antisense antisense MGP_NODShiLtJ_T0004242.1 MGP_NODShiLtJ_G0003718.1 mouse_genomes_project 3 109313264 109317039 - 6330562C20Rik antisense antisense MGP_NODShiLtJ_T0062168.1 MGP_NODShiLtJ_G0027412.1 mouse_genomes_project 3 109859986 109934257 - MGP_NODShiLtJ_P0062168 Rprd2 protein_coding protein_coding MGP_NODShiLtJ_T0062169.1 MGP_NODShiLtJ_G0027412.1 mouse_genomes_project 3 109860448 109934264 - MGP_NODShiLtJ_P0062169 Rprd2 protein_coding protein_coding MGP_NODShiLtJ_T0062170.1 MGP_NODShiLtJ_G0027412.1 mouse_genomes_project 3 109870664 109876877 - Rprd2 protein_coding retained_intron MGP_NODShiLtJ_T0062171.1 MGP_NODShiLtJ_G0027412.1 mouse_genomes_project 3 109872362 109934284 - MGP_NODShiLtJ_P0062171 Rprd2 protein_coding protein_coding MGP_NODShiLtJ_T0062172.1 MGP_NODShiLtJ_G0027412.1 mouse_genomes_project 3 109873177 109876855 - Rprd2 protein_coding processed_transcript MGP_NODShiLtJ_T0062173.1 MGP_NODShiLtJ_G0027412.1 mouse_genomes_project 3 109885893 109934369 - Rprd2 protein_coding retained_intron MGP_NODShiLtJ_T0099201.1 MGP_NODShiLtJ_G0037595.1 mouse_genomes_project 3 108879745 108879847 - Gm26279 snRNA snRNA MGP_NODShiLtJ_T0063564.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156020042 156049323 + MGP_NODShiLtJ_P0063564 Slc9b1 protein_coding protein_coding MGP_NODShiLtJ_T0063565.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156020047 156076182 + MGP_NODShiLtJ_P0063565 Slc9b1 protein_coding protein_coding MGP_NODShiLtJ_T0063566.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156020059 156030902 + Slc9b1 protein_coding retained_intron MGP_NODShiLtJ_T0063567.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156020059 156031141 + Slc9b1 protein_coding retained_intron MGP_NODShiLtJ_T0063568.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156020071 156071438 + Slc9b1 protein_coding processed_transcript MGP_NODShiLtJ_T0063569.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156020343 156053260 + Slc9b1 protein_coding retained_intron MGP_NODShiLtJ_T0063570.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156050671 156052984 + Slc9b1 protein_coding retained_intron MGP_NODShiLtJ_T0063571.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156061294 156076179 + MGP_NODShiLtJ_P0063571 Slc9b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063572.1 MGP_NODShiLtJ_G0027719.1 mouse_genomes_project 3 156072358 156076179 + Slc9b1 protein_coding processed_transcript MGP_NODShiLtJ_T0011433.1 MGP_NODShiLtJ_G0009566.1 mouse_genomes_project 3 95012787 95013029 - Gm22038 misc_RNA misc_RNA MGP_NODShiLtJ_T0001307.1 MGP_NODShiLtJ_G0001228.1 mouse_genomes_project 3 147553596 147557011 - TEC TEC MGP_NODShiLtJ_T0062873.1 MGP_NODShiLtJ_G0027590.1 mouse_genomes_project 3 123858406 123944239 + MGP_NODShiLtJ_P0062873 Sort1 protein_coding protein_coding MGP_NODShiLtJ_T0062874.1 MGP_NODShiLtJ_G0027590.1 mouse_genomes_project 3 123858415 123944307 + MGP_NODShiLtJ_P0062874 Sort1 protein_coding protein_coding MGP_NODShiLtJ_T0062875.1 MGP_NODShiLtJ_G0027590.1 mouse_genomes_project 3 123938262 123944234 + Sort1 protein_coding retained_intron MGP_NODShiLtJ_T0013975.1 MGP_NODShiLtJ_G0012083.1 mouse_genomes_project 3 75288179 75288501 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059699.1 MGP_NODShiLtJ_G0026863.1 mouse_genomes_project 3 5562625 5649370 + MGP_NODShiLtJ_P0059699 Pkia protein_coding protein_coding MGP_NODShiLtJ_T0059700.1 MGP_NODShiLtJ_G0026863.1 mouse_genomes_project 3 5562626 5659498 + MGP_NODShiLtJ_P0059700 Pkia protein_coding protein_coding MGP_NODShiLtJ_T0059701.1 MGP_NODShiLtJ_G0026863.1 mouse_genomes_project 3 5641073 5656545 + MGP_NODShiLtJ_P0059701 Pkia protein_coding protein_coding MGP_NODShiLtJ_T0062720.1 MGP_NODShiLtJ_G0027550.1 mouse_genomes_project 3 121837111 121843304 + Dennd2d protein_coding processed_transcript MGP_NODShiLtJ_T0062721.1 MGP_NODShiLtJ_G0027550.1 mouse_genomes_project 3 121837137 121858855 + MGP_NODShiLtJ_P0062721 Dennd2d protein_coding protein_coding MGP_NODShiLtJ_T0062722.1 MGP_NODShiLtJ_G0027550.1 mouse_genomes_project 3 121837156 121843322 + MGP_NODShiLtJ_P0062722 Dennd2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062723.1 MGP_NODShiLtJ_G0027550.1 mouse_genomes_project 3 121840766 121856810 + MGP_NODShiLtJ_P0062723 Dennd2d protein_coding protein_coding MGP_NODShiLtJ_T0062724.1 MGP_NODShiLtJ_G0027550.1 mouse_genomes_project 3 121842134 121843358 + Dennd2d protein_coding retained_intron MGP_NODShiLtJ_T0062725.1 MGP_NODShiLtJ_G0027550.1 mouse_genomes_project 3 121847889 121850010 + Dennd2d protein_coding retained_intron MGP_NODShiLtJ_T0007600.1 MGP_NODShiLtJ_G0006212.1 mouse_genomes_project 3 123801940 123816425 + Gm42754 lincRNA lincRNA MGP_NODShiLtJ_T0010418.1 MGP_NODShiLtJ_G0008551.1 mouse_genomes_project 3 92578558 92578669 - Gm25749 miRNA miRNA MGP_NODShiLtJ_T0014050.1 MGP_NODShiLtJ_G0012158.1 mouse_genomes_project 3 106271270 106271897 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001226.1 MGP_NODShiLtJ_G0001147.1 mouse_genomes_project 3 98340740 98342284 + TEC TEC MGP_NODShiLtJ_T0099200.1 MGP_NODShiLtJ_G0037594.1 mouse_genomes_project 3 103740617 103740764 - Gm23464 snRNA snRNA MGP_NODShiLtJ_T0001122.1 MGP_NODShiLtJ_G0001045.1 mouse_genomes_project 3 38621509 38622067 + TEC TEC MGP_NODShiLtJ_T0014091.1 MGP_NODShiLtJ_G0012199.1 mouse_genomes_project 3 116014204 116014640 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101867.1 MGP_NODShiLtJ_G0040035.1 mouse_genomes_project 3 100222900 100223425 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0059737.1 MGP_NODShiLtJ_G0026874.1 mouse_genomes_project 3 8712638 8720444 + MGP_NODShiLtJ_P0059737 protein_coding protein_coding MGP_NODShiLtJ_T0098341.1 MGP_NODShiLtJ_G0036746.1 mouse_genomes_project 3 118801328 118802750 - Gm43149 sense_intronic sense_intronic MGP_NODShiLtJ_T0013997.1 MGP_NODShiLtJ_G0012105.1 mouse_genomes_project 3 82252454 82252968 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014157.1 MGP_NODShiLtJ_G0012265.1 mouse_genomes_project 3 139867997 139868601 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001194.1 MGP_NODShiLtJ_G0001115.1 mouse_genomes_project 3 64550130 64554085 - TEC TEC MGP_NODShiLtJ_T0011435.1 MGP_NODShiLtJ_G0009568.1 mouse_genomes_project 3 102294153 102294405 + Gm22642 misc_RNA misc_RNA MGP_NODShiLtJ_T0063221.1 MGP_NODShiLtJ_G0027656.1 mouse_genomes_project 3 141479536 141620020 + MGP_NODShiLtJ_P0063221 Pde5a protein_coding protein_coding MGP_NODShiLtJ_T0063222.1 MGP_NODShiLtJ_G0027656.1 mouse_genomes_project 3 141480159 141620018 + MGP_NODShiLtJ_P0063222 Pde5a protein_coding protein_coding MGP_NODShiLtJ_T0063223.1 MGP_NODShiLtJ_G0027656.1 mouse_genomes_project 3 141480811 141531429 + Pde5a protein_coding retained_intron MGP_NODShiLtJ_T0001177.1 MGP_NODShiLtJ_G0001098.1 mouse_genomes_project 3 58391745 58398705 - TEC TEC MGP_NODShiLtJ_T0001291.1 MGP_NODShiLtJ_G0001212.1 mouse_genomes_project 3 146240345 146240871 + TEC TEC MGP_NODShiLtJ_T0011420.1 MGP_NODShiLtJ_G0009553.1 mouse_genomes_project 3 13524219 13524514 + Gm25981 misc_RNA misc_RNA MGP_NODShiLtJ_T0060262.1 MGP_NODShiLtJ_G0026984.1 mouse_genomes_project 3 40353022 40375171 - MGP_NODShiLtJ_P0060262 Nudt6 protein_coding protein_coding MGP_NODShiLtJ_T0060263.1 MGP_NODShiLtJ_G0026984.1 mouse_genomes_project 3 40353022 40375787 - MGP_NODShiLtJ_P0060263 Nudt6 protein_coding protein_coding MGP_NODShiLtJ_T0060264.1 MGP_NODShiLtJ_G0026984.1 mouse_genomes_project 3 40353098 40375181 - MGP_NODShiLtJ_P0060264 Nudt6 protein_coding protein_coding MGP_NODShiLtJ_T0060265.1 MGP_NODShiLtJ_G0026984.1 mouse_genomes_project 3 40353187 40366248 - Nudt6 protein_coding processed_transcript MGP_NODShiLtJ_T0060266.1 MGP_NODShiLtJ_G0026984.1 mouse_genomes_project 3 40353205 40375161 - MGP_NODShiLtJ_P0060266 Nudt6 protein_coding protein_coding MGP_NODShiLtJ_T0060267.1 MGP_NODShiLtJ_G0026984.1 mouse_genomes_project 3 40353464 40375164 - MGP_NODShiLtJ_P0060267 Nudt6 protein_coding protein_coding MGP_NODShiLtJ_T0060268.1 MGP_NODShiLtJ_G0026984.1 mouse_genomes_project 3 40357588 40375148 - MGP_NODShiLtJ_P0060268 Nudt6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060269.1 MGP_NODShiLtJ_G0026984.1 mouse_genomes_project 3 40367972 40375157 - MGP_NODShiLtJ_P0060269 Nudt6 protein_coding protein_coding MGP_NODShiLtJ_T0101109.1 MGP_NODShiLtJ_G0039456.1 mouse_genomes_project 3 22727403 22777138 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101110.1 MGP_NODShiLtJ_G0039456.1 mouse_genomes_project 3 22727482 22737285 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101111.1 MGP_NODShiLtJ_G0039456.1 mouse_genomes_project 3 22727672 22727837 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0013768.1 MGP_NODShiLtJ_G0011876.1 mouse_genomes_project 3 895018 895417 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061086.1 MGP_NODShiLtJ_G0027168.1 mouse_genomes_project 3 98621391 98626999 - MGP_NODShiLtJ_P0061086 Rps3a1 protein_coding protein_coding MGP_NODShiLtJ_T0061087.1 MGP_NODShiLtJ_G0027168.1 mouse_genomes_project 3 98621440 98626904 - MGP_NODShiLtJ_P0061087 Rps3a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0007477.1 MGP_NODShiLtJ_G0006118.1 mouse_genomes_project 3 58472704 58564750 - Gm37202 lincRNA lincRNA MGP_NODShiLtJ_T0013915.1 MGP_NODShiLtJ_G0012023.1 mouse_genomes_project 3 55944873 55945336 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062132.1 MGP_NODShiLtJ_G0027408.1 mouse_genomes_project 3 109736121 109740511 + MGP_NODShiLtJ_P0062132 Mcl1 protein_coding protein_coding MGP_NODShiLtJ_T0062133.1 MGP_NODShiLtJ_G0027408.1 mouse_genomes_project 3 109736190 109738157 + MGP_NODShiLtJ_P0062133 Mcl1 protein_coding protein_coding MGP_NODShiLtJ_T0062774.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 122984037 123038823 - MGP_NODShiLtJ_P0062774 Slc6a17 protein_coding protein_coding MGP_NODShiLtJ_T0062775.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 122984042 123038823 - MGP_NODShiLtJ_P0062775 Slc6a17 protein_coding protein_coding MGP_NODShiLtJ_T0062776.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 122984043 123020477 - MGP_NODShiLtJ_P0062776 Slc6a17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062777.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 122984045 122985200 - Slc6a17 protein_coding processed_transcript MGP_NODShiLtJ_T0062778.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 123002032 123038554 - Slc6a17 protein_coding processed_transcript MGP_NODShiLtJ_T0062779.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 123009716 123013142 - Slc6a17 protein_coding processed_transcript MGP_NODShiLtJ_T0062780.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 123009718 123038823 - Slc6a17 protein_coding retained_intron MGP_NODShiLtJ_T0062781.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 123015661 123038750 - Slc6a17 protein_coding processed_transcript MGP_NODShiLtJ_T0062782.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 123015707 123038142 - MGP_NODShiLtJ_P0062782 Slc6a17 protein_coding protein_coding MGP_NODShiLtJ_T0062783.1 MGP_NODShiLtJ_G0027566.1 mouse_genomes_project 3 123020617 123038132 - Slc6a17 protein_coding processed_transcript MGP_NODShiLtJ_T0013976.1 MGP_NODShiLtJ_G0012084.1 mouse_genomes_project 3 76089051 76089999 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001297.1 MGP_NODShiLtJ_G0001218.1 mouse_genomes_project 3 146622452 146624980 - TEC TEC MGP_NODShiLtJ_T0061422.1 MGP_NODShiLtJ_G0027232.1 mouse_genomes_project 3 102118176 102132875 - MGP_NODShiLtJ_P0061422 Hcn3 protein_coding protein_coding MGP_NODShiLtJ_T0061423.1 MGP_NODShiLtJ_G0027232.1 mouse_genomes_project 3 102120817 102123318 - Hcn3 protein_coding retained_intron MGP_NODShiLtJ_T0061424.1 MGP_NODShiLtJ_G0027232.1 mouse_genomes_project 3 102120934 102123300 - Hcn3 protein_coding retained_intron MGP_NODShiLtJ_T0061425.1 MGP_NODShiLtJ_G0027232.1 mouse_genomes_project 3 102123566 102132659 - Hcn3 protein_coding processed_transcript MGP_NODShiLtJ_T0061568.1 MGP_NODShiLtJ_G0027256.1 mouse_genomes_project 3 102437056 102452809 + MGP_NODShiLtJ_P0061568 Pbxip1 protein_coding protein_coding MGP_NODShiLtJ_T0061569.1 MGP_NODShiLtJ_G0027256.1 mouse_genomes_project 3 102437062 102447371 + Pbxip1 protein_coding processed_transcript MGP_NODShiLtJ_T0061570.1 MGP_NODShiLtJ_G0027256.1 mouse_genomes_project 3 102437065 102448010 + MGP_NODShiLtJ_P0061570 Pbxip1 protein_coding protein_coding MGP_NODShiLtJ_T0061571.1 MGP_NODShiLtJ_G0027256.1 mouse_genomes_project 3 102437104 102447319 + MGP_NODShiLtJ_P0061571 Pbxip1 protein_coding protein_coding MGP_NODShiLtJ_T0061572.1 MGP_NODShiLtJ_G0027256.1 mouse_genomes_project 3 102437106 102447363 + MGP_NODShiLtJ_P0061572 Pbxip1 protein_coding protein_coding MGP_NODShiLtJ_T0062771.1 MGP_NODShiLtJ_G0027564.1 mouse_genomes_project 3 122830093 122840799 - MGP_NODShiLtJ_P0062771 Rbm15 protein_coding protein_coding MGP_NODShiLtJ_T0062772.1 MGP_NODShiLtJ_G0027564.1 mouse_genomes_project 3 122832399 122840227 - Rbm15 protein_coding retained_intron MGP_NODShiLtJ_T0014132.1 MGP_NODShiLtJ_G0012240.1 mouse_genomes_project 3 128847075 128848777 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060732.1 MGP_NODShiLtJ_G0027079.1 mouse_genomes_project 3 72127535 72148839 - MGP_NODShiLtJ_P0060732 protein_coding protein_coding MGP_NODShiLtJ_T0014064.1 MGP_NODShiLtJ_G0012172.1 mouse_genomes_project 3 108789230 108790060 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060887.1 MGP_NODShiLtJ_G0027121.1 mouse_genomes_project 3 86256747 86260831 - Pdcd10 protein_coding retained_intron MGP_NODShiLtJ_T0060888.1 MGP_NODShiLtJ_G0027121.1 mouse_genomes_project 3 86256991 86282701 - MGP_NODShiLtJ_P0060888 Pdcd10 protein_coding protein_coding MGP_NODShiLtJ_T0060889.1 MGP_NODShiLtJ_G0027121.1 mouse_genomes_project 3 86268677 86300887 - MGP_NODShiLtJ_P0060889 Pdcd10 protein_coding protein_coding MGP_NODShiLtJ_T0060890.1 MGP_NODShiLtJ_G0027121.1 mouse_genomes_project 3 86273184 86300965 - Pdcd10 protein_coding retained_intron MGP_NODShiLtJ_T0062411.1 MGP_NODShiLtJ_G0027480.1 mouse_genomes_project 3 113825974 113931895 + MGP_NODShiLtJ_P0062411 Tbx15 protein_coding protein_coding MGP_NODShiLtJ_T0062412.1 MGP_NODShiLtJ_G0027480.1 mouse_genomes_project 3 113870021 113891368 + MGP_NODShiLtJ_P0062412 Tbx15 protein_coding protein_coding MGP_NODShiLtJ_T0062785.1 MGP_NODShiLtJ_G0027568.1 mouse_genomes_project 3 123116460 123128156 + MGP_NODShiLtJ_P0062785 Alx3 protein_coding protein_coding MGP_NODShiLtJ_T0004167.1 MGP_NODShiLtJ_G0003664.1 mouse_genomes_project 3 38720932 38730592 + Gm15952 antisense antisense MGP_NODShiLtJ_T0004168.1 MGP_NODShiLtJ_G0003664.1 mouse_genomes_project 3 38720932 38779390 + Gm15952 antisense antisense MGP_NODShiLtJ_T0004169.1 MGP_NODShiLtJ_G0003664.1 mouse_genomes_project 3 38720944 38725931 + Gm15952 antisense antisense MGP_NODShiLtJ_T0061754.1 MGP_NODShiLtJ_G0027285.1 mouse_genomes_project 3 103690581 103701967 + MGP_NODShiLtJ_P0061754 S100a13 protein_coding protein_coding MGP_NODShiLtJ_T0062500.1 MGP_NODShiLtJ_G0027503.1 mouse_genomes_project 3 117957343 117971744 + MGP_NODShiLtJ_P0062500 Sike1 protein_coding protein_coding MGP_NODShiLtJ_T0062501.1 MGP_NODShiLtJ_G0027503.1 mouse_genomes_project 3 117957365 117961717 + Sike1 protein_coding retained_intron MGP_NODShiLtJ_T0062502.1 MGP_NODShiLtJ_G0027503.1 mouse_genomes_project 3 117957430 117965481 + MGP_NODShiLtJ_P0062502 Sike1 protein_coding protein_coding MGP_NODShiLtJ_T0062503.1 MGP_NODShiLtJ_G0027503.1 mouse_genomes_project 3 117958513 117959817 + Sike1 protein_coding retained_intron MGP_NODShiLtJ_T0062504.1 MGP_NODShiLtJ_G0027503.1 mouse_genomes_project 3 117958640 117965123 + MGP_NODShiLtJ_P0062504 Sike1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062505.1 MGP_NODShiLtJ_G0027503.1 mouse_genomes_project 3 117959194 117961704 + Sike1 protein_coding retained_intron MGP_NODShiLtJ_T0101121.1 MGP_NODShiLtJ_G0039460.1 mouse_genomes_project 3 108309840 108310614 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101122.1 MGP_NODShiLtJ_G0039460.1 mouse_genomes_project 3 108310031 108310448 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0098020.1 MGP_NODShiLtJ_G0036432.1 mouse_genomes_project 3 8431959 8432068 - Gm24786 rRNA rRNA MGP_NODShiLtJ_T0001232.1 MGP_NODShiLtJ_G0001153.1 mouse_genomes_project 3 105770761 105790330 - TEC TEC MGP_NODShiLtJ_T0060936.1 MGP_NODShiLtJ_G0027130.1 mouse_genomes_project 3 91335054 91341549 + MGP_NODShiLtJ_P0060936 4930579G24Rik protein_coding protein_coding MGP_NODShiLtJ_T0013803.1 MGP_NODShiLtJ_G0011911.1 mouse_genomes_project 3 11877202 11877788 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001351.1 MGP_NODShiLtJ_G0001271.1 mouse_genomes_project 3 175714575 175716353 + TEC TEC MGP_NODShiLtJ_T0098340.1 MGP_NODShiLtJ_G0036745.1 mouse_genomes_project 3 118629615 118630875 + Gm43066 sense_intronic sense_intronic MGP_NODShiLtJ_T0010416.1 MGP_NODShiLtJ_G0008549.1 mouse_genomes_project 3 77581723 77581787 + Mir15b miRNA miRNA MGP_NODShiLtJ_T0063728.1 MGP_NODShiLtJ_G0027750.1 mouse_genomes_project 3 160294949 160910599 + MGP_NODShiLtJ_P0063728 Stpg2 protein_coding protein_coding MGP_NODShiLtJ_T0063729.1 MGP_NODShiLtJ_G0027750.1 mouse_genomes_project 3 160295148 160911288 + MGP_NODShiLtJ_P0063729 Stpg2 protein_coding protein_coding MGP_NODShiLtJ_T0101862.1 MGP_NODShiLtJ_G0040030.1 mouse_genomes_project 3 73069442 73070018 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0063142.1 MGP_NODShiLtJ_G0027643.1 mouse_genomes_project 3 139818684 139903785 - MGP_NODShiLtJ_P0063142 Tmem56 protein_coding protein_coding MGP_NODShiLtJ_T0063143.1 MGP_NODShiLtJ_G0027643.1 mouse_genomes_project 3 139818931 139883362 - MGP_NODShiLtJ_P0063143 Tmem56 protein_coding protein_coding MGP_NODShiLtJ_T0063144.1 MGP_NODShiLtJ_G0027643.1 mouse_genomes_project 3 139818931 139883336 - MGP_NODShiLtJ_P0063144 Tmem56 protein_coding protein_coding MGP_NODShiLtJ_T0063145.1 MGP_NODShiLtJ_G0027643.1 mouse_genomes_project 3 139822963 139870727 - MGP_NODShiLtJ_P0063145 Tmem56 protein_coding protein_coding MGP_NODShiLtJ_T0063146.1 MGP_NODShiLtJ_G0027643.1 mouse_genomes_project 3 139845212 139903785 - MGP_NODShiLtJ_P0063146 Tmem56 protein_coding protein_coding MGP_NODShiLtJ_T0063147.1 MGP_NODShiLtJ_G0027643.1 mouse_genomes_project 3 139845256 139848412 - Tmem56 protein_coding retained_intron MGP_NODShiLtJ_T0063148.1 MGP_NODShiLtJ_G0027643.1 mouse_genomes_project 3 139852560 139903682 - Tmem56 protein_coding processed_transcript MGP_NODShiLtJ_T0063149.1 MGP_NODShiLtJ_G0027643.1 mouse_genomes_project 3 139852613 139903689 - Tmem56 protein_coding processed_transcript MGP_NODShiLtJ_T0011443.1 MGP_NODShiLtJ_G0009576.1 mouse_genomes_project 3 177045213 177045481 + Gm22136 misc_RNA misc_RNA MGP_NODShiLtJ_T0004150.1 MGP_NODShiLtJ_G0003653.1 mouse_genomes_project 3 28191698 28192927 + A830092H15Rik antisense antisense MGP_NODShiLtJ_T0004151.1 MGP_NODShiLtJ_G0003653.1 mouse_genomes_project 3 28192499 28193923 + A830092H15Rik antisense antisense MGP_NODShiLtJ_T0010442.1 MGP_NODShiLtJ_G0008575.1 mouse_genomes_project 3 124726124 124726238 + Gm44384 miRNA miRNA MGP_NODShiLtJ_T0014046.1 MGP_NODShiLtJ_G0012154.1 mouse_genomes_project 3 105488182 105488530 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007674.1 MGP_NODShiLtJ_G0006272.1 mouse_genomes_project 3 165210911 165214000 + lincRNA lincRNA MGP_NODShiLtJ_T0063001.1 MGP_NODShiLtJ_G0027615.1 mouse_genomes_project 3 130639084 130691776 - MGP_NODShiLtJ_P0063001 Rnpc3 protein_coding protein_coding MGP_NODShiLtJ_T0063002.1 MGP_NODShiLtJ_G0027615.1 mouse_genomes_project 3 130639084 130691776 - MGP_NODShiLtJ_P0063002 Rnpc3 protein_coding protein_coding MGP_NODShiLtJ_T0063003.1 MGP_NODShiLtJ_G0027615.1 mouse_genomes_project 3 130660722 130672126 - Rnpc3 protein_coding processed_transcript MGP_NODShiLtJ_T0063004.1 MGP_NODShiLtJ_G0027615.1 mouse_genomes_project 3 130676880 130691706 - Rnpc3 protein_coding retained_intron MGP_NODShiLtJ_T0013922.1 MGP_NODShiLtJ_G0012030.1 mouse_genomes_project 3 57875505 57875818 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061814.1 MGP_NODShiLtJ_G0027319.1 mouse_genomes_project 3 106049702 106049933 - MGP_NODShiLtJ_P0061814 Sprr4 protein_coding protein_coding MGP_NODShiLtJ_T0001229.1 MGP_NODShiLtJ_G0001150.1 mouse_genomes_project 3 102195405 102198145 + TEC TEC MGP_NODShiLtJ_T0013971.1 MGP_NODShiLtJ_G0012079.1 mouse_genomes_project 3 74409962 74410719 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099228.1 MGP_NODShiLtJ_G0037622.1 mouse_genomes_project 3 158871101 158871200 - Gm25920 snRNA snRNA MGP_NODShiLtJ_T0007569.1 MGP_NODShiLtJ_G0006186.1 mouse_genomes_project 3 110579441 110580010 + Gm26654 lincRNA lincRNA MGP_NODShiLtJ_T0060631.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66263860 66281117 - MGP_NODShiLtJ_P0060631 P2ry14 protein_coding protein_coding MGP_NODShiLtJ_T0060632.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66264630 66304427 - MGP_NODShiLtJ_P0060632 P2ry14 protein_coding protein_coding MGP_NODShiLtJ_T0060633.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66264630 66280979 - MGP_NODShiLtJ_P0060633 P2ry14 protein_coding protein_coding MGP_NODShiLtJ_T0060634.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66264631 66280977 - MGP_NODShiLtJ_P0060634 P2ry14 protein_coding protein_coding MGP_NODShiLtJ_T0060635.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66264937 66281682 - MGP_NODShiLtJ_P0060635 P2ry14 protein_coding protein_coding MGP_NODShiLtJ_T0060636.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66265712 66281568 - MGP_NODShiLtJ_P0060636 P2ry14 protein_coding protein_coding MGP_NODShiLtJ_T0060637.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66266016 66281473 - MGP_NODShiLtJ_P0060637 P2ry14 protein_coding protein_coding MGP_NODShiLtJ_T0060638.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66266031 66282813 - MGP_NODShiLtJ_P0060638 P2ry14 protein_coding protein_coding MGP_NODShiLtJ_T0060639.1 MGP_NODShiLtJ_G0027055.1 mouse_genomes_project 3 66296774 66304553 - P2ry14 protein_coding retained_intron MGP_NODShiLtJ_T0063196.1 MGP_NODShiLtJ_G0027652.1 mouse_genomes_project 3 140953637 140965751 + Gclm protein_coding processed_transcript MGP_NODShiLtJ_T0063197.1 MGP_NODShiLtJ_G0027652.1 mouse_genomes_project 3 140953911 140975917 + MGP_NODShiLtJ_P0063197 Gclm protein_coding protein_coding MGP_NODShiLtJ_T0063198.1 MGP_NODShiLtJ_G0027652.1 mouse_genomes_project 3 140953913 140972069 + MGP_NODShiLtJ_P0063198 Gclm protein_coding protein_coding MGP_NODShiLtJ_T0063199.1 MGP_NODShiLtJ_G0027652.1 mouse_genomes_project 3 140954006 140974737 + MGP_NODShiLtJ_P0063199 Gclm protein_coding protein_coding MGP_NODShiLtJ_T0063200.1 MGP_NODShiLtJ_G0027652.1 mouse_genomes_project 3 140971231 140975775 + Gclm protein_coding retained_intron MGP_NODShiLtJ_T0101888.1 MGP_NODShiLtJ_G0040056.1 mouse_genomes_project 3 108533965 108565636 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001200.1 MGP_NODShiLtJ_G0001121.1 mouse_genomes_project 3 66845498 66847926 + TEC TEC MGP_NODShiLtJ_T0062830.1 MGP_NODShiLtJ_G0027579.1 mouse_genomes_project 3 123556671 123577600 - MGP_NODShiLtJ_P0062830 Gstm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062831.1 MGP_NODShiLtJ_G0027579.1 mouse_genomes_project 3 123556676 123577798 - MGP_NODShiLtJ_P0062831 Gstm1 protein_coding protein_coding MGP_NODShiLtJ_T0062832.1 MGP_NODShiLtJ_G0027579.1 mouse_genomes_project 3 123556682 123557738 - Gstm1 protein_coding processed_transcript MGP_NODShiLtJ_T0062833.1 MGP_NODShiLtJ_G0027579.1 mouse_genomes_project 3 123556812 123576425 - MGP_NODShiLtJ_P0062833 Gstm1 protein_coding protein_coding MGP_NODShiLtJ_T0062834.1 MGP_NODShiLtJ_G0027579.1 mouse_genomes_project 3 123557048 123577631 - MGP_NODShiLtJ_P0062834 Gstm1 protein_coding protein_coding MGP_NODShiLtJ_T0062459.1 MGP_NODShiLtJ_G0027494.1 mouse_genomes_project 3 116635662 116661474 - MGP_NODShiLtJ_P0062459 Mab21l3 protein_coding protein_coding MGP_NODShiLtJ_T0062460.1 MGP_NODShiLtJ_G0027494.1 mouse_genomes_project 3 116636269 116678325 - MGP_NODShiLtJ_P0062460 Mab21l3 protein_coding protein_coding MGP_NODShiLtJ_T0101870.1 MGP_NODShiLtJ_G0040038.1 mouse_genomes_project 3 101315002 101315573 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001154.1 MGP_NODShiLtJ_G0001077.1 mouse_genomes_project 3 57169258 57171909 - TEC TEC MGP_NODShiLtJ_T0013789.1 MGP_NODShiLtJ_G0011897.1 mouse_genomes_project 3 7152803 7153116 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014122.1 MGP_NODShiLtJ_G0012230.1 mouse_genomes_project 3 124218173 124218598 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060966.1 MGP_NODShiLtJ_G0027137.1 mouse_genomes_project 3 94052705 94076791 + MGP_NODShiLtJ_P0060966 Ctso protein_coding protein_coding MGP_NODShiLtJ_T0060967.1 MGP_NODShiLtJ_G0027137.1 mouse_genomes_project 3 94052727 94053429 + Ctso protein_coding retained_intron MGP_NODShiLtJ_T0060968.1 MGP_NODShiLtJ_G0027137.1 mouse_genomes_project 3 94052746 94063116 + Ctso protein_coding processed_transcript MGP_NODShiLtJ_T0060969.1 MGP_NODShiLtJ_G0027137.1 mouse_genomes_project 3 94071009 94074365 + Ctso protein_coding retained_intron MGP_NODShiLtJ_T0059726.1 MGP_NODShiLtJ_G0026871.1 mouse_genomes_project 3 7991316 8195536 - MGP_NODShiLtJ_P0059726 Zfp704 protein_coding protein_coding MGP_NODShiLtJ_T0059727.1 MGP_NODShiLtJ_G0026871.1 mouse_genomes_project 3 8002588 8145698 - MGP_NODShiLtJ_P0059727 Zfp704 protein_coding protein_coding MGP_NODShiLtJ_T0059728.1 MGP_NODShiLtJ_G0026871.1 mouse_genomes_project 3 8002992 8005333 - Zfp704 protein_coding retained_intron MGP_NODShiLtJ_T0014244.1 MGP_NODShiLtJ_G0012352.1 mouse_genomes_project 3 171858877 171859336 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014107.1 MGP_NODShiLtJ_G0012215.1 mouse_genomes_project 3 119772086 119772429 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007643.1 MGP_NODShiLtJ_G0006245.1 mouse_genomes_project 3 151004874 151006229 - Gm43349 lincRNA lincRNA MGP_NODShiLtJ_T0101873.1 MGP_NODShiLtJ_G0040041.1 mouse_genomes_project 3 103233028 103233520 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001280.1 MGP_NODShiLtJ_G0001201.1 mouse_genomes_project 3 142010593 142013221 - TEC TEC MGP_NODShiLtJ_T0007679.1 MGP_NODShiLtJ_G0006277.1 mouse_genomes_project 3 165533259 165555037 + Gm42703 lincRNA lincRNA MGP_NODShiLtJ_T0007562.1 MGP_NODShiLtJ_G0006180.1 mouse_genomes_project 3 109972771 109978643 + Gm26594 lincRNA lincRNA MGP_NODShiLtJ_T0061808.1 MGP_NODShiLtJ_G0027313.1 mouse_genomes_project 3 105947123 105948438 + MGP_NODShiLtJ_P0061808 Sprr2j-ps protein_coding protein_coding MGP_NODShiLtJ_T0007485.1 MGP_NODShiLtJ_G0006125.1 mouse_genomes_project 3 60206918 60214727 + Gm43565 lincRNA lincRNA MGP_NODShiLtJ_T0060190.1 MGP_NODShiLtJ_G0026973.1 mouse_genomes_project 3 39316003 39322351 + MGP_NODShiLtJ_P0060190 1810062G17Rik protein_coding protein_coding MGP_NODShiLtJ_T0061586.1 MGP_NODShiLtJ_G0027260.1 mouse_genomes_project 3 102768499 102786914 - MGP_NODShiLtJ_P0061586 Chrnb2 protein_coding protein_coding MGP_NODShiLtJ_T0061587.1 MGP_NODShiLtJ_G0027260.1 mouse_genomes_project 3 102774673 102785707 - Chrnb2 protein_coding processed_transcript MGP_NODShiLtJ_T0061588.1 MGP_NODShiLtJ_G0027260.1 mouse_genomes_project 3 102774673 102786938 - MGP_NODShiLtJ_P0061588 Chrnb2 protein_coding protein_coding MGP_NODShiLtJ_T0063153.1 MGP_NODShiLtJ_G0027645.1 mouse_genomes_project 3 140066655 140098200 + MGP_NODShiLtJ_P0063153 Cnn3 protein_coding protein_coding MGP_NODShiLtJ_T0063154.1 MGP_NODShiLtJ_G0027645.1 mouse_genomes_project 3 140066703 140098192 + Cnn3 protein_coding retained_intron MGP_NODShiLtJ_T0063155.1 MGP_NODShiLtJ_G0027645.1 mouse_genomes_project 3 140066940 140097805 + MGP_NODShiLtJ_P0063155 Cnn3 protein_coding protein_coding MGP_NODShiLtJ_T0063156.1 MGP_NODShiLtJ_G0027645.1 mouse_genomes_project 3 140067452 140090631 + Cnn3 protein_coding processed_transcript MGP_NODShiLtJ_T0063157.1 MGP_NODShiLtJ_G0027645.1 mouse_genomes_project 3 140090038 140097137 + MGP_NODShiLtJ_P0063157 Cnn3 protein_coding protein_coding MGP_NODShiLtJ_T0063158.1 MGP_NODShiLtJ_G0027645.1 mouse_genomes_project 3 140091294 140097348 + Cnn3 protein_coding retained_intron MGP_NODShiLtJ_T0063159.1 MGP_NODShiLtJ_G0027645.1 mouse_genomes_project 3 140097077 140097941 + MGP_NODShiLtJ_P0063159 Cnn3 protein_coding protein_coding MGP_NODShiLtJ_T0063160.1 MGP_NODShiLtJ_G0027645.1 mouse_genomes_project 3 140097106 140097943 + MGP_NODShiLtJ_P0063160 Cnn3 protein_coding protein_coding MGP_NODShiLtJ_T0059755.1 MGP_NODShiLtJ_G0026882.1 mouse_genomes_project 3 8985835 8989758 - MGP_NODShiLtJ_P0059755 Slc10a5 protein_coding protein_coding MGP_NODShiLtJ_T0001287.1 MGP_NODShiLtJ_G0001208.1 mouse_genomes_project 3 146164366 146168799 + TEC TEC MGP_NODShiLtJ_T0014239.1 MGP_NODShiLtJ_G0012347.1 mouse_genomes_project 3 168900236 168900628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013774.1 MGP_NODShiLtJ_G0011882.1 mouse_genomes_project 3 2093528 2093648 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063814.1 MGP_NODShiLtJ_G0027768.1 mouse_genomes_project 3 166815192 166869814 - MGP_NODShiLtJ_P0063814 Clca3a1 protein_coding protein_coding MGP_NODShiLtJ_T0063815.1 MGP_NODShiLtJ_G0027768.1 mouse_genomes_project 3 166824318 166829168 - MGP_NODShiLtJ_P0063815 Clca3a1 protein_coding protein_coding MGP_NODShiLtJ_T0063816.1 MGP_NODShiLtJ_G0027768.1 mouse_genomes_project 3 166867445 166869780 - Clca3a1 protein_coding retained_intron MGP_NODShiLtJ_T0062763.1 MGP_NODShiLtJ_G0027561.1 mouse_genomes_project 3 122727011 122732863 - MGP_NODShiLtJ_P0062763 Prok1 protein_coding protein_coding MGP_NODShiLtJ_T0062764.1 MGP_NODShiLtJ_G0027561.1 mouse_genomes_project 3 122727024 122731472 - Prok1 protein_coding retained_intron MGP_NODShiLtJ_T0062765.1 MGP_NODShiLtJ_G0027561.1 mouse_genomes_project 3 122729342 122733918 - MGP_NODShiLtJ_P0062765 Prok1 protein_coding protein_coding MGP_NODShiLtJ_T0062385.1 MGP_NODShiLtJ_G0027468.1 mouse_genomes_project 3 112712866 112740139 - MGP_NODShiLtJ_P0062385 protein_coding protein_coding MGP_NODShiLtJ_T0062386.1 MGP_NODShiLtJ_G0027468.1 mouse_genomes_project 3 112721395 112733763 - protein_coding retained_intron MGP_NODShiLtJ_T0062387.1 MGP_NODShiLtJ_G0027468.1 mouse_genomes_project 3 112721935 112728834 - protein_coding retained_intron MGP_NODShiLtJ_T0062388.1 MGP_NODShiLtJ_G0027468.1 mouse_genomes_project 3 112722042 112737689 - MGP_NODShiLtJ_P0062388 protein_coding protein_coding MGP_NODShiLtJ_T0007574.1 MGP_NODShiLtJ_G0006191.1 mouse_genomes_project 3 115141092 115142390 + Gm43121 lincRNA lincRNA MGP_NODShiLtJ_T0101869.1 MGP_NODShiLtJ_G0040037.1 mouse_genomes_project 3 101139969 101150414 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013854.1 MGP_NODShiLtJ_G0011962.1 mouse_genomes_project 3 32891499 32891971 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064134.1 MGP_NODShiLtJ_G0027823.1 mouse_genomes_project 3 178628945 178638305 - MGP_NODShiLtJ_P0064134 Fpgt protein_coding protein_coding MGP_NODShiLtJ_T0064135.1 MGP_NODShiLtJ_G0027823.1 mouse_genomes_project 3 178632494 178638099 - Fpgt protein_coding processed_transcript MGP_NODShiLtJ_T0064136.1 MGP_NODShiLtJ_G0027823.1 mouse_genomes_project 3 178633803 178635382 - Fpgt protein_coding retained_intron MGP_NODShiLtJ_T0064137.1 MGP_NODShiLtJ_G0027823.1 mouse_genomes_project 3 178635805 178638270 - Fpgt protein_coding retained_intron MGP_NODShiLtJ_T0064138.1 MGP_NODShiLtJ_G0027823.1 mouse_genomes_project 3 178636226 178637457 - Fpgt protein_coding processed_transcript MGP_NODShiLtJ_T0064139.1 MGP_NODShiLtJ_G0027823.1 mouse_genomes_project 3 178636311 178638129 - Fpgt protein_coding processed_transcript MGP_NODShiLtJ_T0001136.1 MGP_NODShiLtJ_G0001059.1 mouse_genomes_project 3 42813169 42815888 + TEC TEC MGP_NODShiLtJ_T0004347.1 MGP_NODShiLtJ_G0003787.1 mouse_genomes_project 3 175408617 175409562 + Gm43455 antisense antisense MGP_NODShiLtJ_T0004348.1 MGP_NODShiLtJ_G0003787.1 mouse_genomes_project 3 175408836 175409562 + Gm43455 antisense antisense MGP_NODShiLtJ_T0062228.1 MGP_NODShiLtJ_G0027423.1 mouse_genomes_project 3 110310652 110322662 + Mtmr11 protein_coding retained_intron MGP_NODShiLtJ_T0062229.1 MGP_NODShiLtJ_G0027423.1 mouse_genomes_project 3 110310652 110322663 + MGP_NODShiLtJ_P0062229 Mtmr11 protein_coding protein_coding MGP_NODShiLtJ_T0062230.1 MGP_NODShiLtJ_G0027423.1 mouse_genomes_project 3 110310733 110322663 + MGP_NODShiLtJ_P0062230 Mtmr11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062231.1 MGP_NODShiLtJ_G0027423.1 mouse_genomes_project 3 110310814 110312025 + Mtmr11 protein_coding retained_intron MGP_NODShiLtJ_T0062232.1 MGP_NODShiLtJ_G0027423.1 mouse_genomes_project 3 110311231 110322663 + Mtmr11 protein_coding processed_transcript MGP_NODShiLtJ_T0062233.1 MGP_NODShiLtJ_G0027423.1 mouse_genomes_project 3 110319818 110320937 + Mtmr11 protein_coding processed_transcript MGP_NODShiLtJ_T0062234.1 MGP_NODShiLtJ_G0027423.1 mouse_genomes_project 3 110321530 110322415 + Mtmr11 protein_coding processed_transcript MGP_NODShiLtJ_T0013946.1 MGP_NODShiLtJ_G0012054.1 mouse_genomes_project 3 66661843 66666080 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014143.1 MGP_NODShiLtJ_G0012251.1 mouse_genomes_project 3 132812962 132813383 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060103.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35455392 35595587 - MGP_NODShiLtJ_P0060103 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060104.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35455392 35594595 - MGP_NODShiLtJ_P0060104 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060105.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35455392 35595587 - MGP_NODShiLtJ_P0060105 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060106.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35455392 35595587 - MGP_NODShiLtJ_P0060106 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060107.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35455392 35595587 - MGP_NODShiLtJ_P0060107 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060108.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35455618 35595556 - MGP_NODShiLtJ_P0060108 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060109.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35455938 35659048 - MGP_NODShiLtJ_P0060109 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060110.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35455938 35595562 - MGP_NODShiLtJ_P0060110 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060111.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35456614 35492605 - MGP_NODShiLtJ_P0060111 Pex5l protein_coding protein_coding MGP_NODShiLtJ_T0060112.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35460321 35659213 - Pex5l protein_coding retained_intron MGP_NODShiLtJ_T0060113.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35645747 35659042 - Pex5l protein_coding processed_transcript MGP_NODShiLtJ_T0060114.1 MGP_NODShiLtJ_G0026959.1 mouse_genomes_project 3 35655937 35659149 - Pex5l protein_coding retained_intron MGP_NODShiLtJ_T0062575.1 MGP_NODShiLtJ_G0027515.1 mouse_genomes_project 3 118836793 118845322 - MGP_NODShiLtJ_P0062575 Dclre1b protein_coding protein_coding MGP_NODShiLtJ_T0062576.1 MGP_NODShiLtJ_G0027515.1 mouse_genomes_project 3 118839079 118845558 - Dclre1b protein_coding retained_intron MGP_NODShiLtJ_T0062577.1 MGP_NODShiLtJ_G0027515.1 mouse_genomes_project 3 118839097 118844433 - MGP_NODShiLtJ_P0062577 Dclre1b protein_coding protein_coding MGP_NODShiLtJ_T0062578.1 MGP_NODShiLtJ_G0027515.1 mouse_genomes_project 3 118839793 118843890 - Dclre1b protein_coding retained_intron MGP_NODShiLtJ_T0062579.1 MGP_NODShiLtJ_G0027515.1 mouse_genomes_project 3 118840221 118845426 - MGP_NODShiLtJ_P0062579 Dclre1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062580.1 MGP_NODShiLtJ_G0027515.1 mouse_genomes_project 3 118842126 118845622 - MGP_NODShiLtJ_P0062580 Dclre1b protein_coding protein_coding MGP_NODShiLtJ_T0062553.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118599419 118658584 + MGP_NODShiLtJ_P0062553 Syt6 protein_coding protein_coding MGP_NODShiLtJ_T0062554.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118599469 118662839 + MGP_NODShiLtJ_P0062554 Syt6 protein_coding protein_coding MGP_NODShiLtJ_T0062555.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118599470 118662839 + MGP_NODShiLtJ_P0062555 Syt6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062556.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118599488 118660429 + MGP_NODShiLtJ_P0062556 Syt6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062557.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118599566 118658565 + MGP_NODShiLtJ_P0062557 Syt6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062558.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118601491 118612649 + MGP_NODShiLtJ_P0062558 Syt6 protein_coding protein_coding MGP_NODShiLtJ_T0062559.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118601536 118662838 + MGP_NODShiLtJ_P0062559 Syt6 protein_coding protein_coding MGP_NODShiLtJ_T0062560.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118601552 118672594 + MGP_NODShiLtJ_P0062560 Syt6 protein_coding protein_coding MGP_NODShiLtJ_T0062561.1 MGP_NODShiLtJ_G0027510.1 mouse_genomes_project 3 118601552 118655237 + MGP_NODShiLtJ_P0062561 Syt6 protein_coding protein_coding MGP_NODShiLtJ_T0014060.1 MGP_NODShiLtJ_G0012168.1 mouse_genomes_project 3 107243911 107244127 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014191.1 MGP_NODShiLtJ_G0012299.1 mouse_genomes_project 3 152886691 152887079 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014098.1 MGP_NODShiLtJ_G0012206.1 mouse_genomes_project 3 117569099 117569226 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004156.1 MGP_NODShiLtJ_G0003656.1 mouse_genomes_project 3 33019694 33025965 + Gm15462 antisense antisense MGP_NODShiLtJ_T0061051.1 MGP_NODShiLtJ_G0027158.1 mouse_genomes_project 3 96844620 96934458 - MGP_NODShiLtJ_P0061051 protein_coding protein_coding MGP_NODShiLtJ_T0061053.1 MGP_NODShiLtJ_G0027158.1 mouse_genomes_project 3 96845731 96934409 - MGP_NODShiLtJ_P0061053 protein_coding protein_coding MGP_NODShiLtJ_T0061054.1 MGP_NODShiLtJ_G0027158.1 mouse_genomes_project 3 96846263 96934549 - MGP_NODShiLtJ_P0061054 protein_coding protein_coding MGP_NODShiLtJ_T0062139.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109834278 109839723 - MGP_NODShiLtJ_P0062139 Ecm1 protein_coding protein_coding MGP_NODShiLtJ_T0062140.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109834279 109839721 - MGP_NODShiLtJ_P0062140 Ecm1 protein_coding protein_coding MGP_NODShiLtJ_T0062141.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109834280 109835150 - Ecm1 protein_coding retained_intron MGP_NODShiLtJ_T0062142.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109836268 109839703 - MGP_NODShiLtJ_P0062142 Ecm1 protein_coding protein_coding MGP_NODShiLtJ_T0062143.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109836280 109839721 - MGP_NODShiLtJ_P0062143 Ecm1 protein_coding protein_coding MGP_NODShiLtJ_T0062144.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109836341 109839723 - MGP_NODShiLtJ_P0062144 Ecm1 protein_coding protein_coding MGP_NODShiLtJ_T0062145.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109836753 109839698 - MGP_NODShiLtJ_P0062145 Ecm1 protein_coding protein_coding MGP_NODShiLtJ_T0062146.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109836914 109839703 - MGP_NODShiLtJ_P0062146 Ecm1 protein_coding protein_coding MGP_NODShiLtJ_T0062147.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109837503 109838377 - Ecm1 protein_coding retained_intron MGP_NODShiLtJ_T0062148.1 MGP_NODShiLtJ_G0027410.1 mouse_genomes_project 3 109838037 109839723 - MGP_NODShiLtJ_P0062148 Ecm1 protein_coding protein_coding MGP_NODShiLtJ_T0062906.1 MGP_NODShiLtJ_G0027596.1 mouse_genomes_project 3 124143765 124148869 + 1700013F07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0062907.1 MGP_NODShiLtJ_G0027596.1 mouse_genomes_project 3 124148709 124154180 + 1700013F07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0062908.1 MGP_NODShiLtJ_G0027596.1 mouse_genomes_project 3 124148716 124155822 + MGP_NODShiLtJ_P0062908 1700013F07Rik protein_coding protein_coding MGP_NODShiLtJ_T0001212.1 MGP_NODShiLtJ_G0001133.1 mouse_genomes_project 3 82879380 82881244 - TEC TEC MGP_NODShiLtJ_T0010436.1 MGP_NODShiLtJ_G0008569.1 mouse_genomes_project 3 109835042 109835105 - Mir7014 miRNA miRNA MGP_NODShiLtJ_T0001340.1 MGP_NODShiLtJ_G0001260.1 mouse_genomes_project 3 168630839 168632179 + TEC TEC MGP_NODShiLtJ_T0001105.1 MGP_NODShiLtJ_G0001028.1 mouse_genomes_project 3 32813308 32814176 + TEC TEC MGP_NODShiLtJ_T0060417.1 MGP_NODShiLtJ_G0027008.1 mouse_genomes_project 3 57692705 57697986 - MGP_NODShiLtJ_P0060417 Ndufc1 protein_coding protein_coding MGP_NODShiLtJ_T0060418.1 MGP_NODShiLtJ_G0027008.1 mouse_genomes_project 3 57693485 57696479 - Ndufc1 protein_coding retained_intron MGP_NODShiLtJ_T0060419.1 MGP_NODShiLtJ_G0027008.1 mouse_genomes_project 3 57693508 57697664 - Ndufc1 protein_coding processed_transcript MGP_NODShiLtJ_T0060420.1 MGP_NODShiLtJ_G0027008.1 mouse_genomes_project 3 57693612 57697962 - MGP_NODShiLtJ_P0060420 Ndufc1 protein_coding protein_coding MGP_NODShiLtJ_T0007663.1 MGP_NODShiLtJ_G0006264.1 mouse_genomes_project 3 161000713 161004270 - Gm32693 lincRNA lincRNA MGP_NODShiLtJ_T0061213.1 MGP_NODShiLtJ_G0027196.1 mouse_genomes_project 3 100794282 100796258 - MGP_NODShiLtJ_P0061213 Apoa1bp protein_coding protein_coding MGP_NODShiLtJ_T0063775.1 MGP_NODShiLtJ_G0027761.1 mouse_genomes_project 3 164611623 164635835 + MGP_NODShiLtJ_P0063775 Gtf2b protein_coding protein_coding MGP_NODShiLtJ_T0063776.1 MGP_NODShiLtJ_G0027761.1 mouse_genomes_project 3 164611801 164614995 + Gtf2b protein_coding retained_intron MGP_NODShiLtJ_T0063905.1 MGP_NODShiLtJ_G0027790.1 mouse_genomes_project 3 168840001 168856495 - MGP_NODShiLtJ_P0063905 Rpf1 protein_coding protein_coding MGP_NODShiLtJ_T0063906.1 MGP_NODShiLtJ_G0027790.1 mouse_genomes_project 3 168840389 168842270 - MGP_NODShiLtJ_P0063906 Rpf1 protein_coding protein_coding MGP_NODShiLtJ_T0063907.1 MGP_NODShiLtJ_G0027790.1 mouse_genomes_project 3 168840468 168842538 - Rpf1 protein_coding retained_intron MGP_NODShiLtJ_T0063908.1 MGP_NODShiLtJ_G0027790.1 mouse_genomes_project 3 168842218 168855052 - Rpf1 protein_coding processed_transcript MGP_NODShiLtJ_T0063909.1 MGP_NODShiLtJ_G0027790.1 mouse_genomes_project 3 168844841 168856477 - MGP_NODShiLtJ_P0063909 Rpf1 protein_coding protein_coding MGP_NODShiLtJ_T0001186.1 MGP_NODShiLtJ_G0001107.1 mouse_genomes_project 3 60217933 60219535 + TEC TEC MGP_NODShiLtJ_T0062638.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119952767 119978463 - MGP_NODShiLtJ_P0062638 Mov10 protein_coding protein_coding MGP_NODShiLtJ_T0062639.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119952767 119978784 - MGP_NODShiLtJ_P0062639 Mov10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062640.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119952767 119978784 - MGP_NODShiLtJ_P0062640 Mov10 protein_coding protein_coding MGP_NODShiLtJ_T0062641.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119952767 119978784 - MGP_NODShiLtJ_P0062641 Mov10 protein_coding protein_coding MGP_NODShiLtJ_T0062642.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119952767 119978526 - MGP_NODShiLtJ_P0062642 Mov10 protein_coding protein_coding MGP_NODShiLtJ_T0062643.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119963096 119977575 - Mov10 protein_coding processed_transcript MGP_NODShiLtJ_T0062644.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119963137 119978784 - MGP_NODShiLtJ_P0062644 Mov10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062645.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119963954 119978337 - Mov10 protein_coding retained_intron MGP_NODShiLtJ_T0062646.1 MGP_NODShiLtJ_G0027528.1 mouse_genomes_project 3 119963975 119978522 - Mov10 protein_coding processed_transcript MGP_NODShiLtJ_T0064114.1 MGP_NODShiLtJ_G0027819.1 mouse_genomes_project 3 178101368 178116375 - Tyw3 protein_coding processed_transcript MGP_NODShiLtJ_T0064115.1 MGP_NODShiLtJ_G0027819.1 mouse_genomes_project 3 178101601 178120194 - MGP_NODShiLtJ_P0064115 Tyw3 protein_coding protein_coding MGP_NODShiLtJ_T0064116.1 MGP_NODShiLtJ_G0027819.1 mouse_genomes_project 3 178107878 178120272 - MGP_NODShiLtJ_P0064116 Tyw3 protein_coding protein_coding MGP_NODShiLtJ_T0004304.1 MGP_NODShiLtJ_G0003755.1 mouse_genomes_project 3 141294163 141305528 + Gm43569 antisense antisense MGP_NODShiLtJ_T0060036.1 MGP_NODShiLtJ_G0026945.1 mouse_genomes_project 3 33473657 33502263 + MGP_NODShiLtJ_P0060036 Skil protein_coding protein_coding MGP_NODShiLtJ_T0060037.1 MGP_NODShiLtJ_G0026945.1 mouse_genomes_project 3 33473660 33479993 + Skil protein_coding retained_intron MGP_NODShiLtJ_T0060038.1 MGP_NODShiLtJ_G0026945.1 mouse_genomes_project 3 33473660 33502267 + MGP_NODShiLtJ_P0060038 Skil protein_coding protein_coding MGP_NODShiLtJ_T0060039.1 MGP_NODShiLtJ_G0026945.1 mouse_genomes_project 3 33473664 33476492 + MGP_NODShiLtJ_P0060039 Skil protein_coding protein_coding MGP_NODShiLtJ_T0060040.1 MGP_NODShiLtJ_G0026945.1 mouse_genomes_project 3 33473724 33498370 + MGP_NODShiLtJ_P0060040 Skil protein_coding protein_coding MGP_NODShiLtJ_T0060041.1 MGP_NODShiLtJ_G0026945.1 mouse_genomes_project 3 33475432 33498081 + MGP_NODShiLtJ_P0060041 Skil protein_coding protein_coding MGP_NODShiLtJ_T0060042.1 MGP_NODShiLtJ_G0026945.1 mouse_genomes_project 3 33475930 33502270 + MGP_NODShiLtJ_P0060042 Skil protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013773.1 MGP_NODShiLtJ_G0011881.1 mouse_genomes_project 3 1738824 1739254 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001204.1 MGP_NODShiLtJ_G0001125.1 mouse_genomes_project 3 73730030 73730979 - TEC TEC MGP_NODShiLtJ_T0098027.1 MGP_NODShiLtJ_G0036439.1 mouse_genomes_project 3 110687212 110687329 + Gm28001 rRNA rRNA MGP_NODShiLtJ_T0063550.1 MGP_NODShiLtJ_G0027716.1 mouse_genomes_project 3 155874253 155944468 + MGP_NODShiLtJ_P0063550 Cenpe protein_coding protein_coding MGP_NODShiLtJ_T0063551.1 MGP_NODShiLtJ_G0027716.1 mouse_genomes_project 3 155909855 155914321 + MGP_NODShiLtJ_P0063551 Cenpe protein_coding protein_coding MGP_NODShiLtJ_T0063552.1 MGP_NODShiLtJ_G0027716.1 mouse_genomes_project 3 155930085 155930525 + Cenpe protein_coding retained_intron MGP_NODShiLtJ_T0063553.1 MGP_NODShiLtJ_G0027716.1 mouse_genomes_project 3 155930888 155937034 + Cenpe protein_coding retained_intron MGP_NODShiLtJ_T0063554.1 MGP_NODShiLtJ_G0027716.1 mouse_genomes_project 3 155941483 155942015 + Cenpe protein_coding retained_intron MGP_NODShiLtJ_T0001258.1 MGP_NODShiLtJ_G0001179.1 mouse_genomes_project 3 124167097 124168530 + TEC TEC MGP_NODShiLtJ_T0099239.1 MGP_NODShiLtJ_G0037633.1 mouse_genomes_project 3 181369958 181370065 - Gm23379 snRNA snRNA MGP_NODShiLtJ_T0001294.1 MGP_NODShiLtJ_G0001215.1 mouse_genomes_project 3 146577444 146578489 - TEC TEC MGP_NODShiLtJ_T0061793.1 MGP_NODShiLtJ_G0027301.1 mouse_genomes_project 3 105555262 105558128 - MGP_NODShiLtJ_P0061793 Lor protein_coding protein_coding MGP_NODShiLtJ_T0061060.1 MGP_NODShiLtJ_G0027162.1 mouse_genomes_project 3 97185187 97360614 + MGP_NODShiLtJ_P0061060 Fbxw7 protein_coding protein_coding MGP_NODShiLtJ_T0061061.1 MGP_NODShiLtJ_G0027162.1 mouse_genomes_project 3 97185397 97359098 + Fbxw7 protein_coding retained_intron MGP_NODShiLtJ_T0061062.1 MGP_NODShiLtJ_G0027162.1 mouse_genomes_project 3 97237657 97360614 + MGP_NODShiLtJ_P0061062 Fbxw7 protein_coding protein_coding MGP_NODShiLtJ_T0061063.1 MGP_NODShiLtJ_G0027162.1 mouse_genomes_project 3 97305217 97360613 + MGP_NODShiLtJ_P0061063 Fbxw7 protein_coding protein_coding MGP_NODShiLtJ_T0061064.1 MGP_NODShiLtJ_G0027162.1 mouse_genomes_project 3 97334227 97359061 + MGP_NODShiLtJ_P0061064 Fbxw7 protein_coding protein_coding MGP_NODShiLtJ_T0004357.1 MGP_NODShiLtJ_G0003795.1 mouse_genomes_project 3 181499530 181506106 - Gm43159 antisense antisense MGP_NODShiLtJ_T0014175.1 MGP_NODShiLtJ_G0012283.1 mouse_genomes_project 3 145778438 145779684 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001107.1 MGP_NODShiLtJ_G0001030.1 mouse_genomes_project 3 32921676 32922566 - TEC TEC MGP_NODShiLtJ_T0099205.1 MGP_NODShiLtJ_G0037599.1 mouse_genomes_project 3 110605977 110606142 + Gm24136 snRNA snRNA MGP_NODShiLtJ_T0101851.1 MGP_NODShiLtJ_G0040019.1 mouse_genomes_project 3 14203649 14218350 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014084.1 MGP_NODShiLtJ_G0012192.1 mouse_genomes_project 3 114029649 114029883 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007629.1 MGP_NODShiLtJ_G0006233.1 mouse_genomes_project 3 145718784 145720815 + Gm42827 lincRNA lincRNA MGP_NODShiLtJ_T0013866.1 MGP_NODShiLtJ_G0011974.1 mouse_genomes_project 3 38761621 38761942 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061562.1 MGP_NODShiLtJ_G0027255.1 mouse_genomes_project 3 102430559 102433089 + Pygo2 protein_coding processed_transcript MGP_NODShiLtJ_T0061563.1 MGP_NODShiLtJ_G0027255.1 mouse_genomes_project 3 102430606 102435474 + MGP_NODShiLtJ_P0061563 Pygo2 protein_coding protein_coding MGP_NODShiLtJ_T0061564.1 MGP_NODShiLtJ_G0027255.1 mouse_genomes_project 3 102430769 102431515 + Pygo2 protein_coding processed_transcript MGP_NODShiLtJ_T0061565.1 MGP_NODShiLtJ_G0027255.1 mouse_genomes_project 3 102431085 102433028 + Pygo2 protein_coding processed_transcript MGP_NODShiLtJ_T0061566.1 MGP_NODShiLtJ_G0027255.1 mouse_genomes_project 3 102431182 102435474 + MGP_NODShiLtJ_P0061566 Pygo2 protein_coding protein_coding MGP_NODShiLtJ_T0061567.1 MGP_NODShiLtJ_G0027255.1 mouse_genomes_project 3 102431377 102433338 + Pygo2 protein_coding processed_transcript MGP_NODShiLtJ_T0001259.1 MGP_NODShiLtJ_G0001180.1 mouse_genomes_project 3 126014104 126017619 - TEC TEC MGP_NODShiLtJ_T0101863.1 MGP_NODShiLtJ_G0040031.1 mouse_genomes_project 3 79375553 79376588 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099219.1 MGP_NODShiLtJ_G0037613.1 mouse_genomes_project 3 141191044 141191200 + Gm25153 snRNA snRNA MGP_NODShiLtJ_T0060745.1 MGP_NODShiLtJ_G0027085.1 mouse_genomes_project 3 73602052 73615960 - MGP_NODShiLtJ_P0060745 Ssr3 protein_coding protein_coding MGP_NODShiLtJ_T0060746.1 MGP_NODShiLtJ_G0027085.1 mouse_genomes_project 3 73604077 73605779 - Ssr3 protein_coding retained_intron MGP_NODShiLtJ_T0060747.1 MGP_NODShiLtJ_G0027085.1 mouse_genomes_project 3 73604427 73615890 - MGP_NODShiLtJ_P0060747 Ssr3 protein_coding protein_coding MGP_NODShiLtJ_T0001118.1 MGP_NODShiLtJ_G0001041.1 mouse_genomes_project 3 36676862 36682198 + TEC TEC MGP_NODShiLtJ_T0004208.1 MGP_NODShiLtJ_G0003695.1 mouse_genomes_project 3 91968948 91972055 - Gm37892 antisense antisense MGP_NODShiLtJ_T0010410.1 MGP_NODShiLtJ_G0008543.1 mouse_genomes_project 3 41635884 41635990 - Gm24462 miRNA miRNA MGP_NODShiLtJ_T0014240.1 MGP_NODShiLtJ_G0012348.1 mouse_genomes_project 3 169042346 169043281 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060573.1 MGP_NODShiLtJ_G0027039.1 mouse_genomes_project 3 64161288 64178348 - MGP_NODShiLtJ_P0060573 Tm4sf1 protein_coding protein_coding MGP_NODShiLtJ_T0060574.1 MGP_NODShiLtJ_G0027039.1 mouse_genomes_project 3 64161288 64170479 - MGP_NODShiLtJ_P0060574 Tm4sf1 protein_coding protein_coding MGP_NODShiLtJ_T0060575.1 MGP_NODShiLtJ_G0027039.1 mouse_genomes_project 3 64163161 64178400 - MGP_NODShiLtJ_P0060575 Tm4sf1 protein_coding protein_coding MGP_NODShiLtJ_T0060576.1 MGP_NODShiLtJ_G0027039.1 mouse_genomes_project 3 64163193 64170142 - Tm4sf1 protein_coding processed_transcript MGP_NODShiLtJ_T0060577.1 MGP_NODShiLtJ_G0027039.1 mouse_genomes_project 3 64168372 64170715 - MGP_NODShiLtJ_P0060577 Tm4sf1 protein_coding protein_coding MGP_NODShiLtJ_T0060578.1 MGP_NODShiLtJ_G0027039.1 mouse_genomes_project 3 64168408 64169293 - Tm4sf1 protein_coding retained_intron MGP_NODShiLtJ_T0063758.1 MGP_NODShiLtJ_G0027757.1 mouse_genomes_project 3 164332468 164334374 + MGP_NODShiLtJ_P0063758 protein_coding protein_coding MGP_NODShiLtJ_T0063759.1 MGP_NODShiLtJ_G0027757.1 mouse_genomes_project 3 164332538 164345707 + MGP_NODShiLtJ_P0063759 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063760.1 MGP_NODShiLtJ_G0027757.1 mouse_genomes_project 3 164332585 164336714 + MGP_NODShiLtJ_P0063760 protein_coding protein_coding MGP_NODShiLtJ_T0063761.1 MGP_NODShiLtJ_G0027757.1 mouse_genomes_project 3 164332617 164338038 + protein_coding processed_transcript MGP_NODShiLtJ_T0063762.1 MGP_NODShiLtJ_G0027757.1 mouse_genomes_project 3 164333670 164337584 + MGP_NODShiLtJ_P0063762 protein_coding protein_coding MGP_NODShiLtJ_T0007657.1 MGP_NODShiLtJ_G0006258.1 mouse_genomes_project 3 158204346 158219340 + Gm567 lincRNA lincRNA MGP_NODShiLtJ_T0014069.1 MGP_NODShiLtJ_G0012177.1 mouse_genomes_project 3 109920538 109921433 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013989.1 MGP_NODShiLtJ_G0012097.1 mouse_genomes_project 3 79186404 79186963 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062669.1 MGP_NODShiLtJ_G0027534.1 mouse_genomes_project 3 120665010 120903501 + MGP_NODShiLtJ_P0062669 Kcnd3 protein_coding protein_coding MGP_NODShiLtJ_T0062670.1 MGP_NODShiLtJ_G0027534.1 mouse_genomes_project 3 120665267 120897087 + Kcnd3 protein_coding retained_intron MGP_NODShiLtJ_T0062671.1 MGP_NODShiLtJ_G0027534.1 mouse_genomes_project 3 120665780 120898959 + MGP_NODShiLtJ_P0062671 Kcnd3 protein_coding protein_coding MGP_NODShiLtJ_T0062672.1 MGP_NODShiLtJ_G0027534.1 mouse_genomes_project 3 120672869 120898808 + MGP_NODShiLtJ_P0062672 Kcnd3 protein_coding protein_coding MGP_NODShiLtJ_T0062673.1 MGP_NODShiLtJ_G0027534.1 mouse_genomes_project 3 120898503 120899343 + Kcnd3 protein_coding processed_transcript MGP_NODShiLtJ_T0059707.1 MGP_NODShiLtJ_G0026866.1 mouse_genomes_project 3 6977209 7035287 + MGP_NODShiLtJ_P0059707 Stmn2 protein_coding protein_coding MGP_NODShiLtJ_T0059708.1 MGP_NODShiLtJ_G0026866.1 mouse_genomes_project 3 6977364 7022484 + Stmn2 protein_coding retained_intron MGP_NODShiLtJ_T0059709.1 MGP_NODShiLtJ_G0026866.1 mouse_genomes_project 3 6977435 7015052 + Stmn2 protein_coding retained_intron MGP_NODShiLtJ_T0059710.1 MGP_NODShiLtJ_G0026866.1 mouse_genomes_project 3 7033946 7035256 + Stmn2 protein_coding processed_transcript MGP_NODShiLtJ_T0060325.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44178727 44207304 + MGP_NODShiLtJ_P0060325 Larp1b protein_coding protein_coding MGP_NODShiLtJ_T0060326.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44179165 44206768 + MGP_NODShiLtJ_P0060326 Larp1b protein_coding protein_coding MGP_NODShiLtJ_T0060327.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44179191 44190846 + MGP_NODShiLtJ_P0060327 Larp1b protein_coding protein_coding MGP_NODShiLtJ_T0060328.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44190249 44193013 + Larp1b protein_coding processed_transcript MGP_NODShiLtJ_T0060329.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44190786 44206921 + MGP_NODShiLtJ_P0060329 Larp1b protein_coding protein_coding MGP_NODShiLtJ_T0060330.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44192958 44243395 + MGP_NODShiLtJ_P0060330 Larp1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060331.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44200686 44206515 + Larp1b protein_coding processed_transcript MGP_NODShiLtJ_T0060332.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44242105 44273751 + Larp1b protein_coding processed_transcript MGP_NODShiLtJ_T0060333.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44255525 44273807 + Larp1b protein_coding retained_intron MGP_NODShiLtJ_T0060334.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44257419 44273242 + Larp1b protein_coding processed_transcript MGP_NODShiLtJ_T0060335.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44258097 44272678 + MGP_NODShiLtJ_P0060335 Larp1b protein_coding protein_coding MGP_NODShiLtJ_T0060336.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44267101 44267827 + Larp1b protein_coding processed_transcript MGP_NODShiLtJ_T0060337.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44267120 44273771 + Larp1b protein_coding processed_transcript MGP_NODShiLtJ_T0060338.1 MGP_NODShiLtJ_G0026996.1 mouse_genomes_project 3 44270319 44272200 + Larp1b protein_coding processed_transcript MGP_NODShiLtJ_T0061168.1 MGP_NODShiLtJ_G0027186.1 mouse_genomes_project 3 100564021 100593685 - MGP_NODShiLtJ_P0061168 Prcc protein_coding protein_coding MGP_NODShiLtJ_T0007431.1 MGP_NODShiLtJ_G0006084.1 mouse_genomes_project 3 36924439 36981617 - Gm38505 lincRNA lincRNA MGP_NODShiLtJ_T0014014.1 MGP_NODShiLtJ_G0012122.1 mouse_genomes_project 3 90501041 90501707 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007646.1 MGP_NODShiLtJ_G0006248.1 mouse_genomes_project 3 153625828 153628319 - Gm43254 lincRNA lincRNA MGP_NODShiLtJ_T0001119.1 MGP_NODShiLtJ_G0001042.1 mouse_genomes_project 3 37291396 37294229 + TEC TEC MGP_NODShiLtJ_T0059753.1 MGP_NODShiLtJ_G0026881.1 mouse_genomes_project 3 8975019 8989783 - MGP_NODShiLtJ_P0059753 Gm38303 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011434.1 MGP_NODShiLtJ_G0009567.1 mouse_genomes_project 3 95921232 95921530 - Gm22342 misc_RNA misc_RNA MGP_NODShiLtJ_T0063684.1 MGP_NODShiLtJ_G0027742.1 mouse_genomes_project 3 159234026 159257539 + Adh1 protein_coding processed_transcript MGP_NODShiLtJ_T0063685.1 MGP_NODShiLtJ_G0027742.1 mouse_genomes_project 3 159251290 159266559 + MGP_NODShiLtJ_P0063685 Adh1 protein_coding protein_coding MGP_NODShiLtJ_T0063686.1 MGP_NODShiLtJ_G0027742.1 mouse_genomes_project 3 159251441 159255654 + Adh1 protein_coding retained_intron MGP_NODShiLtJ_T0063687.1 MGP_NODShiLtJ_G0027742.1 mouse_genomes_project 3 159251447 159266559 + MGP_NODShiLtJ_P0063687 Adh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063086.1 MGP_NODShiLtJ_G0027633.1 mouse_genomes_project 3 134585207 134654749 - MGP_NODShiLtJ_P0063086 Agl protein_coding protein_coding MGP_NODShiLtJ_T0063087.1 MGP_NODShiLtJ_G0027633.1 mouse_genomes_project 3 134587710 134654002 - MGP_NODShiLtJ_P0063087 Agl protein_coding protein_coding MGP_NODShiLtJ_T0063088.1 MGP_NODShiLtJ_G0027633.1 mouse_genomes_project 3 134588254 134625497 - MGP_NODShiLtJ_P0063088 Agl protein_coding protein_coding MGP_NODShiLtJ_T0063089.1 MGP_NODShiLtJ_G0027633.1 mouse_genomes_project 3 134593326 134654625 - MGP_NODShiLtJ_P0063089 Agl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063090.1 MGP_NODShiLtJ_G0027633.1 mouse_genomes_project 3 134600757 134654712 - MGP_NODShiLtJ_P0063090 Agl protein_coding protein_coding MGP_NODShiLtJ_T0063091.1 MGP_NODShiLtJ_G0027633.1 mouse_genomes_project 3 134624259 134625997 - MGP_NODShiLtJ_P0063091 Agl protein_coding protein_coding MGP_NODShiLtJ_T0063092.1 MGP_NODShiLtJ_G0027633.1 mouse_genomes_project 3 134635005 134654614 - Agl protein_coding retained_intron MGP_NODShiLtJ_T0063093.1 MGP_NODShiLtJ_G0027633.1 mouse_genomes_project 3 134636341 134654434 - MGP_NODShiLtJ_P0063093 Agl protein_coding protein_coding MGP_NODShiLtJ_T0014051.1 MGP_NODShiLtJ_G0012159.1 mouse_genomes_project 3 106577387 106577779 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007563.1 MGP_NODShiLtJ_G0006181.1 mouse_genomes_project 3 110419003 110425036 + Gm42743 lincRNA lincRNA MGP_NODShiLtJ_T0010413.1 MGP_NODShiLtJ_G0008546.1 mouse_genomes_project 3 57568948 57569014 + Gm24282 miRNA miRNA MGP_NODShiLtJ_T0001271.1 MGP_NODShiLtJ_G0001192.1 mouse_genomes_project 3 140063171 140067745 - TEC TEC MGP_NODShiLtJ_T0007397.1 MGP_NODShiLtJ_G0006059.1 mouse_genomes_project 3 13018365 13019503 + lincRNA lincRNA MGP_NODShiLtJ_T0007398.1 MGP_NODShiLtJ_G0006059.1 mouse_genomes_project 3 13018392 13019504 + lincRNA lincRNA MGP_NODShiLtJ_T0007399.1 MGP_NODShiLtJ_G0006059.1 mouse_genomes_project 3 13018438 13019291 + lincRNA lincRNA MGP_NODShiLtJ_T0007400.1 MGP_NODShiLtJ_G0006059.1 mouse_genomes_project 3 13018616 13021307 + lincRNA lincRNA MGP_NODShiLtJ_T0099171.1 MGP_NODShiLtJ_G0037565.1 mouse_genomes_project 3 64888205 64888305 - Gm24531 snRNA snRNA MGP_NODShiLtJ_T0062969.1 MGP_NODShiLtJ_G0027608.1 mouse_genomes_project 3 124639958 124697754 - MGP_NODShiLtJ_P0062969 Fam102b protein_coding protein_coding MGP_NODShiLtJ_T0004239.1 MGP_NODShiLtJ_G0003717.1 mouse_genomes_project 3 109214515 109225161 + Gm16740 antisense antisense MGP_NODShiLtJ_T0007502.1 MGP_NODShiLtJ_G0006137.1 mouse_genomes_project 3 76011863 76014244 - Gm35299 lincRNA lincRNA MGP_NODShiLtJ_T0063534.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153793856 153888450 - MGP_NODShiLtJ_P0063534 Tet2 protein_coding protein_coding MGP_NODShiLtJ_T0063535.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153793860 153809537 - Tet2 protein_coding retained_intron MGP_NODShiLtJ_T0063536.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153794016 153888428 - MGP_NODShiLtJ_P0063536 Tet2 protein_coding protein_coding MGP_NODShiLtJ_T0063537.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153799578 153805549 - Tet2 protein_coding retained_intron MGP_NODShiLtJ_T0063538.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153801258 153812330 - MGP_NODShiLtJ_P0063538 Tet2 protein_coding protein_coding MGP_NODShiLtJ_T0063539.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153810834 153815000 - Tet2 protein_coding retained_intron MGP_NODShiLtJ_T0063540.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153815129 153816756 - Tet2 protein_coding retained_intron MGP_NODShiLtJ_T0063541.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153824626 153889199 - MGP_NODShiLtJ_P0063541 Tet2 protein_coding protein_coding MGP_NODShiLtJ_T0063542.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153849912 153888362 - Tet2 protein_coding retained_intron MGP_NODShiLtJ_T0063543.1 MGP_NODShiLtJ_G0027713.1 mouse_genomes_project 3 153882826 153888346 - Tet2 protein_coding processed_transcript MGP_NODShiLtJ_T0060725.1 MGP_NODShiLtJ_G0027075.1 mouse_genomes_project 3 71863773 71896214 - MGP_NODShiLtJ_P0060725 Slc33a1 protein_coding protein_coding MGP_NODShiLtJ_T0060726.1 MGP_NODShiLtJ_G0027075.1 mouse_genomes_project 3 71873289 71896316 - MGP_NODShiLtJ_P0060726 Slc33a1 protein_coding protein_coding MGP_NODShiLtJ_T0060727.1 MGP_NODShiLtJ_G0027075.1 mouse_genomes_project 3 71873873 71895920 - MGP_NODShiLtJ_P0060727 Slc33a1 protein_coding protein_coding MGP_NODShiLtJ_T0014010.1 MGP_NODShiLtJ_G0012118.1 mouse_genomes_project 3 89645933 89647497 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059740.1 MGP_NODShiLtJ_G0026877.1 mouse_genomes_project 3 8831923 8835525 - MGP_NODShiLtJ_P0059740 protein_coding protein_coding MGP_NODShiLtJ_T0059741.1 MGP_NODShiLtJ_G0026877.1 mouse_genomes_project 3 8831925 8835586 - MGP_NODShiLtJ_P0059741 protein_coding protein_coding MGP_NODShiLtJ_T0059742.1 MGP_NODShiLtJ_G0026877.1 mouse_genomes_project 3 8831928 8835525 - MGP_NODShiLtJ_P0059742 protein_coding protein_coding MGP_NODShiLtJ_T0001254.1 MGP_NODShiLtJ_G0001175.1 mouse_genomes_project 3 123407776 123408462 + TEC TEC MGP_NODShiLtJ_T0059992.1 MGP_NODShiLtJ_G0026936.1 mouse_genomes_project 3 32928878 32948846 + MGP_NODShiLtJ_P0059992 Mynn protein_coding protein_coding MGP_NODShiLtJ_T0059993.1 MGP_NODShiLtJ_G0026936.1 mouse_genomes_project 3 32929444 32948846 + MGP_NODShiLtJ_P0059993 Mynn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059994.1 MGP_NODShiLtJ_G0026936.1 mouse_genomes_project 3 32929450 32946368 + MGP_NODShiLtJ_P0059994 Mynn protein_coding protein_coding MGP_NODShiLtJ_T0059995.1 MGP_NODShiLtJ_G0026936.1 mouse_genomes_project 3 32929452 32930972 + Mynn protein_coding retained_intron MGP_NODShiLtJ_T0059996.1 MGP_NODShiLtJ_G0026936.1 mouse_genomes_project 3 32929457 32946501 + MGP_NODShiLtJ_P0059996 Mynn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059997.1 MGP_NODShiLtJ_G0026936.1 mouse_genomes_project 3 32940293 32944795 + Mynn protein_coding retained_intron MGP_NODShiLtJ_T0059775.1 MGP_NODShiLtJ_G0026888.1 mouse_genomes_project 3 14424764 14463784 + MGP_NODShiLtJ_P0059775 Lrrcc1 protein_coding protein_coding MGP_NODShiLtJ_T0059776.1 MGP_NODShiLtJ_G0026888.1 mouse_genomes_project 3 14424799 14459928 + MGP_NODShiLtJ_P0059776 Lrrcc1 protein_coding protein_coding MGP_NODShiLtJ_T0059777.1 MGP_NODShiLtJ_G0026888.1 mouse_genomes_project 3 14424800 14457730 + MGP_NODShiLtJ_P0059777 Lrrcc1 protein_coding protein_coding MGP_NODShiLtJ_T0059778.1 MGP_NODShiLtJ_G0026888.1 mouse_genomes_project 3 14424855 14453790 + MGP_NODShiLtJ_P0059778 Lrrcc1 protein_coding protein_coding MGP_NODShiLtJ_T0059779.1 MGP_NODShiLtJ_G0026888.1 mouse_genomes_project 3 14424910 14443099 + MGP_NODShiLtJ_P0059779 Lrrcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059780.1 MGP_NODShiLtJ_G0026888.1 mouse_genomes_project 3 14439742 14458033 + MGP_NODShiLtJ_P0059780 Lrrcc1 protein_coding protein_coding MGP_NODShiLtJ_T0059781.1 MGP_NODShiLtJ_G0026888.1 mouse_genomes_project 3 14439818 14446099 + MGP_NODShiLtJ_P0059781 Lrrcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059782.1 MGP_NODShiLtJ_G0026888.1 mouse_genomes_project 3 14442005 14450952 + MGP_NODShiLtJ_P0059782 Lrrcc1 protein_coding protein_coding MGP_NODShiLtJ_T0101865.1 MGP_NODShiLtJ_G0040033.1 mouse_genomes_project 3 92924774 92925238 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014136.1 MGP_NODShiLtJ_G0012244.1 mouse_genomes_project 3 129928978 129929375 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013936.1 MGP_NODShiLtJ_G0012044.1 mouse_genomes_project 3 64432827 64433377 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013864.1 MGP_NODShiLtJ_G0011972.1 mouse_genomes_project 3 38294909 38295345 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013823.1 MGP_NODShiLtJ_G0011931.1 mouse_genomes_project 3 18102072 18102412 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013838.1 MGP_NODShiLtJ_G0011946.1 mouse_genomes_project 3 22045525 22045946 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063639.1 MGP_NODShiLtJ_G0027731.1 mouse_genomes_project 3 158819957 158824496 + MGP_NODShiLtJ_P0063639 H2afz protein_coding protein_coding MGP_NODShiLtJ_T0063640.1 MGP_NODShiLtJ_G0027731.1 mouse_genomes_project 3 158819975 158822659 + H2afz protein_coding processed_transcript MGP_NODShiLtJ_T0063641.1 MGP_NODShiLtJ_G0027731.1 mouse_genomes_project 3 158820078 158823024 + MGP_NODShiLtJ_P0063641 H2afz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063642.1 MGP_NODShiLtJ_G0027731.1 mouse_genomes_project 3 158820078 158823024 + MGP_NODShiLtJ_P0063642 H2afz protein_coding protein_coding MGP_NODShiLtJ_T0063643.1 MGP_NODShiLtJ_G0027731.1 mouse_genomes_project 3 158820360 158824213 + H2afz protein_coding retained_intron MGP_NODShiLtJ_T0063644.1 MGP_NODShiLtJ_G0027731.1 mouse_genomes_project 3 158821689 158822963 + H2afz protein_coding retained_intron MGP_NODShiLtJ_T0001219.1 MGP_NODShiLtJ_G0001140.1 mouse_genomes_project 3 89151189 89152698 - TEC TEC MGP_NODShiLtJ_T0059766.1 MGP_NODShiLtJ_G0026885.1 mouse_genomes_project 3 9089492 9113159 - MGP_NODShiLtJ_P0059766 Snx16 protein_coding protein_coding MGP_NODShiLtJ_T0059767.1 MGP_NODShiLtJ_G0026885.1 mouse_genomes_project 3 9089821 9113144 - MGP_NODShiLtJ_P0059767 Snx16 protein_coding protein_coding MGP_NODShiLtJ_T0059768.1 MGP_NODShiLtJ_G0026885.1 mouse_genomes_project 3 9090612 9113157 - MGP_NODShiLtJ_P0059768 Snx16 protein_coding protein_coding MGP_NODShiLtJ_T0060145.1 MGP_NODShiLtJ_G0026964.1 mouse_genomes_project 3 37298539 37300596 + MGP_NODShiLtJ_P0060145 Sox2 protein_coding protein_coding MGP_NODShiLtJ_T0059999.1 MGP_NODShiLtJ_G0026938.1 mouse_genomes_project 3 32976064 33006051 + MGP_NODShiLtJ_P0059999 Lrriq4 protein_coding protein_coding MGP_NODShiLtJ_T0060000.1 MGP_NODShiLtJ_G0026938.1 mouse_genomes_project 3 32976883 33005919 + MGP_NODShiLtJ_P0060000 Lrriq4 protein_coding protein_coding MGP_NODShiLtJ_T0060001.1 MGP_NODShiLtJ_G0026938.1 mouse_genomes_project 3 32979438 33005919 + MGP_NODShiLtJ_P0060001 Lrriq4 protein_coding protein_coding MGP_NODShiLtJ_T0013899.1 MGP_NODShiLtJ_G0012007.1 mouse_genomes_project 3 49904083 49904333 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013990.1 MGP_NODShiLtJ_G0012098.1 mouse_genomes_project 3 80518961 80519418 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004249.1 MGP_NODShiLtJ_G0003722.1 mouse_genomes_project 3 110388048 110392189 + antisense antisense MGP_NODShiLtJ_T0004235.1 MGP_NODShiLtJ_G0003715.1 mouse_genomes_project 3 108967756 108970343 - A730011C13Rik antisense antisense MGP_NODShiLtJ_T0004236.1 MGP_NODShiLtJ_G0003715.1 mouse_genomes_project 3 108968389 108970697 - A730011C13Rik antisense antisense MGP_NODShiLtJ_T0007655.1 MGP_NODShiLtJ_G0006256.1 mouse_genomes_project 3 157807271 157810587 - Gm43357 lincRNA lincRNA MGP_NODShiLtJ_T0001111.1 MGP_NODShiLtJ_G0001034.1 mouse_genomes_project 3 34917126 34918367 + TEC TEC MGP_NODShiLtJ_T0013788.1 MGP_NODShiLtJ_G0011896.1 mouse_genomes_project 3 7090474 7091704 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010462.1 MGP_NODShiLtJ_G0008595.1 mouse_genomes_project 3 164455459 164455546 - Mir6381 miRNA miRNA MGP_NODShiLtJ_T0064174.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182016453 182043179 - MGP_NODShiLtJ_P0064174 protein_coding protein_coding MGP_NODShiLtJ_T0064175.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182016624 182030025 - protein_coding retained_intron MGP_NODShiLtJ_T0064176.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182016899 182038305 - MGP_NODShiLtJ_P0064176 protein_coding protein_coding MGP_NODShiLtJ_T0064177.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182017483 182029743 - protein_coding retained_intron MGP_NODShiLtJ_T0064178.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182017849 182043091 - MGP_NODShiLtJ_P0064178 protein_coding protein_coding MGP_NODShiLtJ_T0064179.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182017874 182018501 - protein_coding retained_intron MGP_NODShiLtJ_T0064180.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182018323 182019128 - protein_coding retained_intron MGP_NODShiLtJ_T0064181.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182018331 182028607 - MGP_NODShiLtJ_P0064181 protein_coding protein_coding MGP_NODShiLtJ_T0064182.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182019962 182030272 - protein_coding retained_intron MGP_NODShiLtJ_T0064183.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182022294 182024087 - protein_coding retained_intron MGP_NODShiLtJ_T0064184.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182025363 182043136 - MGP_NODShiLtJ_P0064184 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064185.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182025403 182043155 - MGP_NODShiLtJ_P0064185 protein_coding protein_coding MGP_NODShiLtJ_T0064186.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182028615 182037994 - MGP_NODShiLtJ_P0064186 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064187.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182029532 182038110 - MGP_NODShiLtJ_P0064187 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064188.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182030011 182043146 - protein_coding retained_intron MGP_NODShiLtJ_T0064189.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182031337 182043151 - protein_coding retained_intron MGP_NODShiLtJ_T0064190.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182033126 182038299 - protein_coding retained_intron MGP_NODShiLtJ_T0064191.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182036743 182038293 - protein_coding retained_intron MGP_NODShiLtJ_T0064192.1 MGP_NODShiLtJ_G0027830.1 mouse_genomes_project 3 182037356 182043154 - protein_coding retained_intron MGP_NODShiLtJ_T0061274.1 MGP_NODShiLtJ_G0027210.1 mouse_genomes_project 3 101230224 101247648 - MGP_NODShiLtJ_P0061274 Pmf1 protein_coding protein_coding MGP_NODShiLtJ_T0061275.1 MGP_NODShiLtJ_G0027210.1 mouse_genomes_project 3 101230224 101247643 - MGP_NODShiLtJ_P0061275 Pmf1 protein_coding protein_coding MGP_NODShiLtJ_T0061276.1 MGP_NODShiLtJ_G0027210.1 mouse_genomes_project 3 101230460 101247582 - Pmf1 protein_coding processed_transcript MGP_NODShiLtJ_T0061277.1 MGP_NODShiLtJ_G0027210.1 mouse_genomes_project 3 101231824 101232802 - Pmf1 protein_coding retained_intron MGP_NODShiLtJ_T0061278.1 MGP_NODShiLtJ_G0027210.1 mouse_genomes_project 3 101232149 101247603 - MGP_NODShiLtJ_P0061278 Pmf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061279.1 MGP_NODShiLtJ_G0027210.1 mouse_genomes_project 3 101233446 101235787 - Pmf1 protein_coding retained_intron MGP_NODShiLtJ_T0061280.1 MGP_NODShiLtJ_G0027210.1 mouse_genomes_project 3 101235609 101247625 - Pmf1 protein_coding retained_intron MGP_NODShiLtJ_T0004340.1 MGP_NODShiLtJ_G0003781.1 mouse_genomes_project 3 164590448 164591443 - Gm15540 antisense antisense MGP_NODShiLtJ_T0099165.1 MGP_NODShiLtJ_G0037559.1 mouse_genomes_project 3 54824161 54824326 + Gm23511 snRNA snRNA MGP_NODShiLtJ_T0017832.1 MGP_NODShiLtJ_G0015384.1 mouse_genomes_project 3 121227578 121252629 + Gm42890 processed_transcript retained_intron MGP_NODShiLtJ_T0017833.1 MGP_NODShiLtJ_G0015384.1 mouse_genomes_project 3 121234190 121244477 + Gm42890 processed_transcript retained_intron MGP_NODShiLtJ_T0001241.1 MGP_NODShiLtJ_G0001162.1 mouse_genomes_project 3 110967486 110968281 - TEC TEC MGP_NODShiLtJ_T0098346.1 MGP_NODShiLtJ_G0036751.1 mouse_genomes_project 3 119158891 119160005 - 9530097N15Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0098331.1 MGP_NODShiLtJ_G0036736.1 mouse_genomes_project 3 116197497 116199675 + Gm42939 sense_intronic sense_intronic MGP_NODShiLtJ_T0060446.1 MGP_NODShiLtJ_G0027014.1 mouse_genomes_project 3 58612714 58699942 + MGP_NODShiLtJ_P0060446 Foxo1 protein_coding protein_coding MGP_NODShiLtJ_T0001208.1 MGP_NODShiLtJ_G0001129.1 mouse_genomes_project 3 74366251 74367360 + TEC TEC MGP_NODShiLtJ_T0013907.1 MGP_NODShiLtJ_G0012015.1 mouse_genomes_project 3 52777790 52778500 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060736.1 MGP_NODShiLtJ_G0027082.1 mouse_genomes_project 3 72470395 72515047 - MGP_NODShiLtJ_P0060736 protein_coding protein_coding MGP_NODShiLtJ_T0007456.1 MGP_NODShiLtJ_G0006105.1 mouse_genomes_project 3 41694622 41695930 + Gm43538 lincRNA lincRNA MGP_NODShiLtJ_T0011704.1 MGP_NODShiLtJ_G0009827.1 mouse_genomes_project 3 105896223 105897537 + MGP_NODShiLtJ_P0011704 Sprr2g polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0013891.1 MGP_NODShiLtJ_G0011999.1 mouse_genomes_project 3 45755222 45755370 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062450.1 MGP_NODShiLtJ_G0027491.1 mouse_genomes_project 3 116058758 116070797 - MGP_NODShiLtJ_P0062450 Cd2 protein_coding protein_coding MGP_NODShiLtJ_T0062451.1 MGP_NODShiLtJ_G0027491.1 mouse_genomes_project 3 116058767 116063243 - Cd2 protein_coding retained_intron MGP_NODShiLtJ_T0062452.1 MGP_NODShiLtJ_G0027491.1 mouse_genomes_project 3 116065930 116070737 - Cd2 protein_coding retained_intron MGP_NODShiLtJ_T0001205.1 MGP_NODShiLtJ_G0001126.1 mouse_genomes_project 3 73935261 73937749 + TEC TEC MGP_NODShiLtJ_T0060609.1 MGP_NODShiLtJ_G0027048.1 mouse_genomes_project 3 65586576 65620783 + MGP_NODShiLtJ_P0060609 Eif2a protein_coding protein_coding MGP_NODShiLtJ_T0060610.1 MGP_NODShiLtJ_G0027048.1 mouse_genomes_project 3 65586797 65607638 + Eif2a protein_coding retained_intron MGP_NODShiLtJ_T0060611.1 MGP_NODShiLtJ_G0027048.1 mouse_genomes_project 3 65586798 65618924 + MGP_NODShiLtJ_P0060611 Eif2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060612.1 MGP_NODShiLtJ_G0027048.1 mouse_genomes_project 3 65586811 65620783 + MGP_NODShiLtJ_P0060612 Eif2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060613.1 MGP_NODShiLtJ_G0027048.1 mouse_genomes_project 3 65587058 65607403 + MGP_NODShiLtJ_P0060613 Eif2a protein_coding protein_coding MGP_NODShiLtJ_T0060614.1 MGP_NODShiLtJ_G0027048.1 mouse_genomes_project 3 65604926 65607638 + Eif2a protein_coding retained_intron MGP_NODShiLtJ_T0060615.1 MGP_NODShiLtJ_G0027048.1 mouse_genomes_project 3 65606040 65613973 + Eif2a protein_coding retained_intron MGP_NODShiLtJ_T0001158.1 MGP_NODShiLtJ_G0001081.1 mouse_genomes_project 3 57574859 57575275 - TEC TEC MGP_NODShiLtJ_T0099196.1 MGP_NODShiLtJ_G0037590.1 mouse_genomes_project 3 102186182 102186289 - Gm23269 snRNA snRNA MGP_NODShiLtJ_T0004332.1 MGP_NODShiLtJ_G0003776.1 mouse_genomes_project 3 159072171 159083894 + Gm43691 antisense antisense MGP_NODShiLtJ_T0014138.1 MGP_NODShiLtJ_G0012246.1 mouse_genomes_project 3 130693206 130693813 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014049.1 MGP_NODShiLtJ_G0012157.1 mouse_genomes_project 3 106018166 106018470 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007676.1 MGP_NODShiLtJ_G0006274.1 mouse_genomes_project 3 165313361 165315451 + 1700001N15Rik lincRNA lincRNA MGP_NODShiLtJ_T0062429.1 MGP_NODShiLtJ_G0027485.1 mouse_genomes_project 3 115269733 115405613 - MGP_NODShiLtJ_P0062429 Man1a2 protein_coding protein_coding MGP_NODShiLtJ_T0062430.1 MGP_NODShiLtJ_G0027485.1 mouse_genomes_project 3 115296458 115368460 - Man1a2 protein_coding processed_transcript MGP_NODShiLtJ_T0062431.1 MGP_NODShiLtJ_G0027485.1 mouse_genomes_project 3 115333734 115404722 - MGP_NODShiLtJ_P0062431 Man1a2 protein_coding protein_coding MGP_NODShiLtJ_T0062432.1 MGP_NODShiLtJ_G0027485.1 mouse_genomes_project 3 115360468 115405235 - MGP_NODShiLtJ_P0062432 Man1a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062433.1 MGP_NODShiLtJ_G0027485.1 mouse_genomes_project 3 115372970 115405418 - Man1a2 protein_coding processed_transcript MGP_NODShiLtJ_T0062434.1 MGP_NODShiLtJ_G0027485.1 mouse_genomes_project 3 115404702 115405569 - Man1a2 protein_coding processed_transcript MGP_NODShiLtJ_T0063206.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141006824 141151503 + Bcar3 protein_coding retained_intron MGP_NODShiLtJ_T0063207.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141144117 141151221 + Bcar3 protein_coding retained_intron MGP_NODShiLtJ_T0063208.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141144138 141257263 + MGP_NODShiLtJ_P0063208 Bcar3 protein_coding protein_coding MGP_NODShiLtJ_T0063209.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141144183 141197871 + Bcar3 protein_coding processed_transcript MGP_NODShiLtJ_T0063210.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141209992 141234746 + MGP_NODShiLtJ_P0063210 Bcar3 protein_coding protein_coding MGP_NODShiLtJ_T0063211.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141230972 141234747 + MGP_NODShiLtJ_P0063211 Bcar3 protein_coding protein_coding MGP_NODShiLtJ_T0063212.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141234361 141239047 + Bcar3 protein_coding retained_intron MGP_NODShiLtJ_T0063213.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141237426 141239235 + MGP_NODShiLtJ_P0063213 Bcar3 protein_coding protein_coding MGP_NODShiLtJ_T0063214.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141238519 141250282 + MGP_NODShiLtJ_P0063214 Bcar3 protein_coding protein_coding MGP_NODShiLtJ_T0063215.1 MGP_NODShiLtJ_G0027654.1 mouse_genomes_project 3 141251717 141252477 + Bcar3 protein_coding retained_intron MGP_NODShiLtJ_T0013916.1 MGP_NODShiLtJ_G0012024.1 mouse_genomes_project 3 56254040 56254362 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098354.1 MGP_NODShiLtJ_G0036759.1 mouse_genomes_project 3 119281531 119285430 - Gm43260 sense_intronic sense_intronic MGP_NODShiLtJ_T0062768.1 MGP_NODShiLtJ_G0027563.1 mouse_genomes_project 3 122793948 122815226 + MGP_NODShiLtJ_P0062768 Slc16a4 protein_coding protein_coding MGP_NODShiLtJ_T0062769.1 MGP_NODShiLtJ_G0027563.1 mouse_genomes_project 3 122794012 122805318 + Slc16a4 protein_coding retained_intron MGP_NODShiLtJ_T0062770.1 MGP_NODShiLtJ_G0027563.1 mouse_genomes_project 3 122794033 122811006 + MGP_NODShiLtJ_P0062770 Slc16a4 protein_coding protein_coding MGP_NODShiLtJ_T0061844.1 MGP_NODShiLtJ_G0027346.1 mouse_genomes_project 3 106677226 106678709 - MGP_NODShiLtJ_P0061844 Crct1 protein_coding protein_coding MGP_NODShiLtJ_T0061845.1 MGP_NODShiLtJ_G0027346.1 mouse_genomes_project 3 106677540 106678691 - MGP_NODShiLtJ_P0061845 Crct1 protein_coding protein_coding MGP_NODShiLtJ_T0010437.1 MGP_NODShiLtJ_G0008570.1 mouse_genomes_project 3 110369240 110369381 + Gm44492 miRNA miRNA MGP_NODShiLtJ_T0007483.1 MGP_NODShiLtJ_G0006123.1 mouse_genomes_project 3 59198059 59207622 - Gm30292 lincRNA lincRNA MGP_NODShiLtJ_T0014177.1 MGP_NODShiLtJ_G0012285.1 mouse_genomes_project 3 147171002 147171348 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014076.1 MGP_NODShiLtJ_G0012184.1 mouse_genomes_project 3 110902741 110903251 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059698.1 MGP_NODShiLtJ_G0026862.1 mouse_genomes_project 3 4667245 4673349 - MGP_NODShiLtJ_P0059698 1700008P02Rik protein_coding protein_coding MGP_NODShiLtJ_T0061230.1 MGP_NODShiLtJ_G0027200.1 mouse_genomes_project 3 100997508 101009344 - MGP_NODShiLtJ_P0061230 Rhbg protein_coding protein_coding MGP_NODShiLtJ_T0060052.1 MGP_NODShiLtJ_G0026950.1 mouse_genomes_project 3 34894298 34925438 + MGP_NODShiLtJ_P0060052 Pik3ca protein_coding protein_coding MGP_NODShiLtJ_T0060053.1 MGP_NODShiLtJ_G0026950.1 mouse_genomes_project 3 34924283 34925435 + Pik3ca protein_coding retained_intron MGP_NODShiLtJ_T0007473.1 MGP_NODShiLtJ_G0006115.1 mouse_genomes_project 3 55002351 55020290 + Gm31415 lincRNA lincRNA MGP_NODShiLtJ_T0013994.1 MGP_NODShiLtJ_G0012102.1 mouse_genomes_project 3 81232876 81233035 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060312.1 MGP_NODShiLtJ_G0026994.1 mouse_genomes_project 3 44014518 44047915 - MGP_NODShiLtJ_P0060312 Mfsd8 protein_coding protein_coding MGP_NODShiLtJ_T0060313.1 MGP_NODShiLtJ_G0026994.1 mouse_genomes_project 3 44015923 44047832 - MGP_NODShiLtJ_P0060313 Mfsd8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060314.1 MGP_NODShiLtJ_G0026994.1 mouse_genomes_project 3 44023346 44047724 - MGP_NODShiLtJ_P0060314 Mfsd8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060315.1 MGP_NODShiLtJ_G0026994.1 mouse_genomes_project 3 44023865 44027380 - Mfsd8 protein_coding retained_intron MGP_NODShiLtJ_T0060316.1 MGP_NODShiLtJ_G0026994.1 mouse_genomes_project 3 44028427 44047564 - MGP_NODShiLtJ_P0060316 Mfsd8 protein_coding protein_coding MGP_NODShiLtJ_T0060317.1 MGP_NODShiLtJ_G0026994.1 mouse_genomes_project 3 44033759 44047846 - MGP_NODShiLtJ_P0060317 Mfsd8 protein_coding protein_coding MGP_NODShiLtJ_T0060254.1 MGP_NODShiLtJ_G0026983.1 mouse_genomes_project 3 40296068 40353486 + MGP_NODShiLtJ_P0060254 Fgf2 protein_coding protein_coding MGP_NODShiLtJ_T0060255.1 MGP_NODShiLtJ_G0026983.1 mouse_genomes_project 3 40296375 40365681 + MGP_NODShiLtJ_P0060255 Fgf2 protein_coding protein_coding MGP_NODShiLtJ_T0060256.1 MGP_NODShiLtJ_G0026983.1 mouse_genomes_project 3 40296572 40352910 + MGP_NODShiLtJ_P0060256 Fgf2 protein_coding protein_coding MGP_NODShiLtJ_T0060257.1 MGP_NODShiLtJ_G0026983.1 mouse_genomes_project 3 40315476 40352910 + Fgf2 protein_coding processed_transcript MGP_NODShiLtJ_T0060258.1 MGP_NODShiLtJ_G0026983.1 mouse_genomes_project 3 40334083 40352910 + Fgf2 protein_coding processed_transcript MGP_NODShiLtJ_T0060259.1 MGP_NODShiLtJ_G0026983.1 mouse_genomes_project 3 40334179 40352910 + MGP_NODShiLtJ_P0060259 Fgf2 protein_coding protein_coding MGP_NODShiLtJ_T0060260.1 MGP_NODShiLtJ_G0026983.1 mouse_genomes_project 3 40334179 40352910 + MGP_NODShiLtJ_P0060260 Fgf2 protein_coding protein_coding MGP_NODShiLtJ_T0060261.1 MGP_NODShiLtJ_G0026983.1 mouse_genomes_project 3 40352653 40352910 + Fgf2 protein_coding retained_intron MGP_NODShiLtJ_T0061838.1 MGP_NODShiLtJ_G0027340.1 mouse_genomes_project 3 106484661 106485999 - MGP_NODShiLtJ_P0061838 Lce1l protein_coding protein_coding MGP_NODShiLtJ_T0011438.1 MGP_NODShiLtJ_G0009571.1 mouse_genomes_project 3 118051353 118051653 + Gm23820 misc_RNA misc_RNA MGP_NODShiLtJ_T0059793.1 MGP_NODShiLtJ_G0026893.1 mouse_genomes_project 3 14786973 14789013 + Car3 protein_coding retained_intron MGP_NODShiLtJ_T0059794.1 MGP_NODShiLtJ_G0026893.1 mouse_genomes_project 3 14786999 14795887 + MGP_NODShiLtJ_P0059794 Car3 protein_coding protein_coding MGP_NODShiLtJ_T0059795.1 MGP_NODShiLtJ_G0026893.1 mouse_genomes_project 3 14792541 14795433 + Car3 protein_coding retained_intron MGP_NODShiLtJ_T0060270.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40375486 40568339 + MGP_NODShiLtJ_P0060270 Spata5 protein_coding protein_coding MGP_NODShiLtJ_T0060271.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40375898 40568339 + MGP_NODShiLtJ_P0060271 Spata5 protein_coding protein_coding MGP_NODShiLtJ_T0060272.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40375941 40515228 + MGP_NODShiLtJ_P0060272 Spata5 protein_coding protein_coding MGP_NODShiLtJ_T0060273.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40375973 40381005 + Spata5 protein_coding processed_transcript MGP_NODShiLtJ_T0060274.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40376452 40381767 + Spata5 protein_coding processed_transcript MGP_NODShiLtJ_T0060275.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40388472 40399474 + Spata5 protein_coding processed_transcript MGP_NODShiLtJ_T0060276.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40396888 40399594 + Spata5 protein_coding retained_intron MGP_NODShiLtJ_T0060277.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40420456 40513590 + Spata5 protein_coding retained_intron MGP_NODShiLtJ_T0060278.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40475643 40568252 + Spata5 protein_coding processed_transcript MGP_NODShiLtJ_T0060279.1 MGP_NODShiLtJ_G0026985.1 mouse_genomes_project 3 40562438 40568333 + Spata5 protein_coding processed_transcript MGP_NODShiLtJ_T0098358.1 MGP_NODShiLtJ_G0036763.1 mouse_genomes_project 3 119637230 119638437 - 4930509H03Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0007539.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100961501 100965988 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007540.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100961514 100980122 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007541.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100962004 100980679 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007542.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100964164 100978972 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007543.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100969177 100976544 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007544.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100969187 100980730 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007545.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100977347 100978986 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007546.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100978963 100984607 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007547.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100980616 100982666 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007548.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100983219 100984418 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0007549.1 MGP_NODShiLtJ_G0006169.1 mouse_genomes_project 3 100983434 100984607 + Gm3764 lincRNA lincRNA MGP_NODShiLtJ_T0013928.1 MGP_NODShiLtJ_G0012036.1 mouse_genomes_project 3 60143986 60144452 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001238.1 MGP_NODShiLtJ_G0001159.1 mouse_genomes_project 3 110073130 110075610 + TEC TEC MGP_NODShiLtJ_T0013792.1 MGP_NODShiLtJ_G0011900.1 mouse_genomes_project 3 7602080 7602525 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060043.1 MGP_NODShiLtJ_G0026946.1 mouse_genomes_project 3 33535203 33549938 + MGP_NODShiLtJ_P0060043 Cldn11 protein_coding protein_coding MGP_NODShiLtJ_T0001335.1 MGP_NODShiLtJ_G0001255.1 mouse_genomes_project 3 157609421 157610424 - TEC TEC MGP_NODShiLtJ_T0010408.1 MGP_NODShiLtJ_G0008541.1 mouse_genomes_project 3 39315527 39315591 - Mir7009 miRNA miRNA MGP_NODShiLtJ_T0014030.1 MGP_NODShiLtJ_G0012138.1 mouse_genomes_project 3 99252930 99253066 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001360.1 MGP_NODShiLtJ_G0001280.1 mouse_genomes_project 3 180525204 180527772 + TEC TEC MGP_NODShiLtJ_T0013924.1 MGP_NODShiLtJ_G0012032.1 mouse_genomes_project 3 58578373 58579125 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063422.1 MGP_NODShiLtJ_G0027690.1 mouse_genomes_project 3 149825358 149842542 + MGP_NODShiLtJ_P0063422 Cfi protein_coding protein_coding MGP_NODShiLtJ_T0063423.1 MGP_NODShiLtJ_G0027690.1 mouse_genomes_project 3 149826185 149874783 + MGP_NODShiLtJ_P0063423 Cfi protein_coding protein_coding MGP_NODShiLtJ_T0013876.1 MGP_NODShiLtJ_G0011984.1 mouse_genomes_project 3 40273918 40274237 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014083.1 MGP_NODShiLtJ_G0012191.1 mouse_genomes_project 3 113744123 113744659 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101892.1 MGP_NODShiLtJ_G0040060.1 mouse_genomes_project 3 121601290 121626068 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014097.1 MGP_NODShiLtJ_G0012205.1 mouse_genomes_project 3 117567150 117569082 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007460.1 MGP_NODShiLtJ_G0006108.1 mouse_genomes_project 3 44524376 44528999 - Gm16508 lincRNA lincRNA MGP_NODShiLtJ_T0063027.1 MGP_NODShiLtJ_G0027621.1 mouse_genomes_project 3 133753134 133754146 + Extl2 protein_coding processed_transcript MGP_NODShiLtJ_T0063028.1 MGP_NODShiLtJ_G0027621.1 mouse_genomes_project 3 133753172 133769776 + Extl2 protein_coding processed_transcript MGP_NODShiLtJ_T0063029.1 MGP_NODShiLtJ_G0027621.1 mouse_genomes_project 3 133753477 133756515 + Extl2 protein_coding processed_transcript MGP_NODShiLtJ_T0063030.1 MGP_NODShiLtJ_G0027621.1 mouse_genomes_project 3 133756338 133778825 + MGP_NODShiLtJ_P0063030 Extl2 protein_coding protein_coding MGP_NODShiLtJ_T0013839.1 MGP_NODShiLtJ_G0011947.1 mouse_genomes_project 3 22617535 22618307 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098326.1 MGP_NODShiLtJ_G0036731.1 mouse_genomes_project 3 115290862 115296076 - Gm43466 sense_intronic sense_intronic MGP_NODShiLtJ_T0062193.1 MGP_NODShiLtJ_G0027416.1 mouse_genomes_project 3 110007297 110015347 - MGP_NODShiLtJ_P0062193 BC028528 protein_coding protein_coding MGP_NODShiLtJ_T0062194.1 MGP_NODShiLtJ_G0027416.1 mouse_genomes_project 3 110007301 110015297 - MGP_NODShiLtJ_P0062194 BC028528 protein_coding protein_coding MGP_NODShiLtJ_T0062195.1 MGP_NODShiLtJ_G0027416.1 mouse_genomes_project 3 110008311 110015272 - MGP_NODShiLtJ_P0062195 BC028528 protein_coding protein_coding MGP_NODShiLtJ_T0062196.1 MGP_NODShiLtJ_G0027416.1 mouse_genomes_project 3 110011292 110015293 - BC028528 protein_coding processed_transcript MGP_NODShiLtJ_T0062197.1 MGP_NODShiLtJ_G0027416.1 mouse_genomes_project 3 110011779 110015323 - BC028528 protein_coding retained_intron MGP_NODShiLtJ_T0059974.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32231838 32310345 - MGP_NODShiLtJ_P0059974 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059975.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32231848 32310694 - MGP_NODShiLtJ_P0059975 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059976.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32231849 32445172 - MGP_NODShiLtJ_P0059976 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059977.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32233109 32547269 - MGP_NODShiLtJ_P0059977 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059978.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32233258 32293007 - MGP_NODShiLtJ_P0059978 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059979.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32233258 32308262 - MGP_NODShiLtJ_P0059979 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059980.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32233324 32293046 - MGP_NODShiLtJ_P0059980 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059981.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32243616 32836478 - MGP_NODShiLtJ_P0059981 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059982.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32245998 32836774 - MGP_NODShiLtJ_P0059982 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059983.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32257886 32877868 - MGP_NODShiLtJ_P0059983 Mecom protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059984.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32264495 32310250 - Mecom protein_coding processed_transcript MGP_NODShiLtJ_T0059985.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32264495 32310393 - Mecom protein_coding retained_intron MGP_NODShiLtJ_T0059986.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32293072 32308628 - MGP_NODShiLtJ_P0059986 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0059987.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32318159 32836685 - Mecom protein_coding processed_transcript MGP_NODShiLtJ_T0059988.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32544549 32547067 - Mecom protein_coding retained_intron MGP_NODShiLtJ_T0059989.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32545675 32836451 - Mecom protein_coding processed_transcript MGP_NODShiLtJ_T0059990.1 MGP_NODShiLtJ_G0026934.1 mouse_genomes_project 3 32547078 32547426 - MGP_NODShiLtJ_P0059990 Mecom protein_coding protein_coding MGP_NODShiLtJ_T0001175.1 MGP_NODShiLtJ_G0001096.1 mouse_genomes_project 3 58324580 58325199 - TEC TEC MGP_NODShiLtJ_T0010432.1 MGP_NODShiLtJ_G0008565.1 mouse_genomes_project 3 107088572 107090006 + miRNA miRNA MGP_NODShiLtJ_T0017873.1 MGP_NODShiLtJ_G0015398.1 mouse_genomes_project 3 177835701 177839113 + AI606473 processed_transcript lincRNA MGP_NODShiLtJ_T0017874.1 MGP_NODShiLtJ_G0015398.1 mouse_genomes_project 3 177836855 177837657 + AI606473 processed_transcript retained_intron MGP_NODShiLtJ_T0010419.1 MGP_NODShiLtJ_G0008552.1 mouse_genomes_project 3 94235785 94235848 - Mir7010 miRNA miRNA MGP_NODShiLtJ_T0060735.1 MGP_NODShiLtJ_G0027081.1 mouse_genomes_project 3 72461543 72515034 - MGP_NODShiLtJ_P0060735 protein_coding protein_coding MGP_NODShiLtJ_T0013937.1 MGP_NODShiLtJ_G0012045.1 mouse_genomes_project 3 64647487 64647964 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007511.1 MGP_NODShiLtJ_G0006145.1 mouse_genomes_project 3 83329054 83500735 - lincRNA lincRNA MGP_NODShiLtJ_T0061902.1 MGP_NODShiLtJ_G0027370.1 mouse_genomes_project 3 108356633 108366475 - MGP_NODShiLtJ_P0061902 Riiad1 protein_coding protein_coding MGP_NODShiLtJ_T0061903.1 MGP_NODShiLtJ_G0027370.1 mouse_genomes_project 3 108356635 108375332 - Riiad1 protein_coding processed_transcript MGP_NODShiLtJ_T0061904.1 MGP_NODShiLtJ_G0027370.1 mouse_genomes_project 3 108359455 108365806 - Riiad1 protein_coding processed_transcript MGP_NODShiLtJ_T0007647.1 MGP_NODShiLtJ_G0006249.1 mouse_genomes_project 3 153993211 154017278 - Gm42563 lincRNA lincRNA MGP_NODShiLtJ_T0060182.1 MGP_NODShiLtJ_G0026970.1 mouse_genomes_project 3 38952569 38975027 + MGP_NODShiLtJ_P0060182 D3Ertd254e protein_coding protein_coding MGP_NODShiLtJ_T0060183.1 MGP_NODShiLtJ_G0026970.1 mouse_genomes_project 3 38952714 38967359 + MGP_NODShiLtJ_P0060183 D3Ertd254e protein_coding protein_coding MGP_NODShiLtJ_T0060184.1 MGP_NODShiLtJ_G0026970.1 mouse_genomes_project 3 38964206 38975020 + MGP_NODShiLtJ_P0060184 D3Ertd254e protein_coding protein_coding MGP_NODShiLtJ_T0060589.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674031 64796945 + MGP_NODShiLtJ_P0060589 Rnf13 protein_coding protein_coding MGP_NODShiLtJ_T0060590.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674032 64733063 + MGP_NODShiLtJ_P0060590 Rnf13 protein_coding protein_coding MGP_NODShiLtJ_T0060591.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674044 64772028 + Rnf13 protein_coding processed_transcript MGP_NODShiLtJ_T0060592.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674051 64795602 + Rnf13 protein_coding processed_transcript MGP_NODShiLtJ_T0060593.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674051 64796947 + MGP_NODShiLtJ_P0060593 Rnf13 protein_coding protein_coding MGP_NODShiLtJ_T0060594.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674054 64788010 + MGP_NODShiLtJ_P0060594 Rnf13 protein_coding protein_coding MGP_NODShiLtJ_T0060595.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674082 64796833 + MGP_NODShiLtJ_P0060595 Rnf13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060596.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674089 64794946 + MGP_NODShiLtJ_P0060596 Rnf13 protein_coding protein_coding MGP_NODShiLtJ_T0060597.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674089 64721711 + MGP_NODShiLtJ_P0060597 Rnf13 protein_coding protein_coding MGP_NODShiLtJ_T0060598.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64674089 64762510 + MGP_NODShiLtJ_P0060598 Rnf13 protein_coding protein_coding MGP_NODShiLtJ_T0060599.1 MGP_NODShiLtJ_G0027044.1 mouse_genomes_project 3 64760803 64764676 + Rnf13 protein_coding retained_intron MGP_NODShiLtJ_T0001224.1 MGP_NODShiLtJ_G0001145.1 mouse_genomes_project 3 97247397 97251283 + TEC TEC MGP_NODShiLtJ_T0063688.1 MGP_NODShiLtJ_G0027743.1 mouse_genomes_project 3 159293251 159311720 + MGP_NODShiLtJ_P0063688 Adh6a protein_coding protein_coding MGP_NODShiLtJ_T0063689.1 MGP_NODShiLtJ_G0027743.1 mouse_genomes_project 3 159293251 159312316 + MGP_NODShiLtJ_P0063689 Adh6a protein_coding protein_coding MGP_NODShiLtJ_T0063227.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141703462 141775349 - MGP_NODShiLtJ_P0063227 Usp53 protein_coding protein_coding MGP_NODShiLtJ_T0063228.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141734421 141736852 - Usp53 protein_coding retained_intron MGP_NODShiLtJ_T0063229.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141738521 141775162 - MGP_NODShiLtJ_P0063229 Usp53 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063230.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141739654 141775345 - MGP_NODShiLtJ_P0063230 Usp53 protein_coding protein_coding MGP_NODShiLtJ_T0063231.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141743695 141775343 - MGP_NODShiLtJ_P0063231 Usp53 protein_coding protein_coding MGP_NODShiLtJ_T0063232.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141745138 141775349 - Usp53 protein_coding retained_intron MGP_NODShiLtJ_T0063233.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141746842 141749301 - Usp53 protein_coding retained_intron MGP_NODShiLtJ_T0063234.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141746885 141775310 - MGP_NODShiLtJ_P0063234 Usp53 protein_coding protein_coding MGP_NODShiLtJ_T0063235.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141747612 141751005 - Usp53 protein_coding retained_intron MGP_NODShiLtJ_T0063236.1 MGP_NODShiLtJ_G0027660.1 mouse_genomes_project 3 141758709 141774732 - Usp53 protein_coding retained_intron MGP_NODShiLtJ_T0059991.1 MGP_NODShiLtJ_G0026935.1 mouse_genomes_project 3 32923905 32926764 - MGP_NODShiLtJ_P0059991 Actrt3 protein_coding protein_coding MGP_NODShiLtJ_T0007390.1 MGP_NODShiLtJ_G0006054.1 mouse_genomes_project 3 7970232 8000614 + C030034L19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007391.1 MGP_NODShiLtJ_G0006054.1 mouse_genomes_project 3 7970236 8001530 + C030034L19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007392.1 MGP_NODShiLtJ_G0006054.1 mouse_genomes_project 3 7970248 7981068 + C030034L19Rik lincRNA lincRNA MGP_NODShiLtJ_T0017805.1 MGP_NODShiLtJ_G0015371.1 mouse_genomes_project 3 56794002 56890830 - Gm6209 processed_transcript lincRNA MGP_NODShiLtJ_T0017806.1 MGP_NODShiLtJ_G0015371.1 mouse_genomes_project 3 56860400 56864958 - Gm6209 processed_transcript retained_intron MGP_NODShiLtJ_T0098491.1 MGP_NODShiLtJ_G0036886.1 mouse_genomes_project 3 167615161 167616196 + D530037P16Rik sense_overlapping sense_overlapping MGP_NODShiLtJ_T0060525.1 MGP_NODShiLtJ_G0027031.1 mouse_genomes_project 3 61707225 61712397 - MGP_NODShiLtJ_P0060525 Ccna1 protein_coding protein_coding MGP_NODShiLtJ_T0060526.1 MGP_NODShiLtJ_G0027031.1 mouse_genomes_project 3 61707231 61716777 - MGP_NODShiLtJ_P0060526 Ccna1 protein_coding protein_coding MGP_NODShiLtJ_T0060527.1 MGP_NODShiLtJ_G0027031.1 mouse_genomes_project 3 61707233 61716764 - MGP_NODShiLtJ_P0060527 Ccna1 protein_coding protein_coding MGP_NODShiLtJ_T0060528.1 MGP_NODShiLtJ_G0027031.1 mouse_genomes_project 3 61707234 61717223 - MGP_NODShiLtJ_P0060528 Ccna1 protein_coding protein_coding MGP_NODShiLtJ_T0060529.1 MGP_NODShiLtJ_G0027031.1 mouse_genomes_project 3 61712344 61717204 - MGP_NODShiLtJ_P0060529 Ccna1 protein_coding protein_coding MGP_NODShiLtJ_T0060530.1 MGP_NODShiLtJ_G0027031.1 mouse_genomes_project 3 61712738 61716759 - MGP_NODShiLtJ_P0060530 Ccna1 protein_coding protein_coding MGP_NODShiLtJ_T0007405.1 MGP_NODShiLtJ_G0006064.1 mouse_genomes_project 3 18257629 18259115 + Mir124-2hg lincRNA lincRNA MGP_NODShiLtJ_T0007406.1 MGP_NODShiLtJ_G0006064.1 mouse_genomes_project 3 18257637 18264336 + Mir124-2hg lincRNA lincRNA MGP_NODShiLtJ_T0007407.1 MGP_NODShiLtJ_G0006064.1 mouse_genomes_project 3 18257654 18264249 + Mir124-2hg lincRNA lincRNA MGP_NODShiLtJ_T0007408.1 MGP_NODShiLtJ_G0006064.1 mouse_genomes_project 3 18258605 18274355 + Mir124-2hg lincRNA lincRNA MGP_NODShiLtJ_T0007409.1 MGP_NODShiLtJ_G0006064.1 mouse_genomes_project 3 18259453 18264336 + Mir124-2hg lincRNA lincRNA MGP_NODShiLtJ_T0013932.1 MGP_NODShiLtJ_G0012040.1 mouse_genomes_project 3 63671926 63672396 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001170.1 MGP_NODShiLtJ_G0001092.1 mouse_genomes_project 3 58200466 58203311 - TEC TEC MGP_NODShiLtJ_T0061004.1 MGP_NODShiLtJ_G0027149.1 mouse_genomes_project 3 95298410 95315727 + MGP_NODShiLtJ_P0061004 Plrg1 protein_coding protein_coding MGP_NODShiLtJ_T0061005.1 MGP_NODShiLtJ_G0027149.1 mouse_genomes_project 3 95298420 95315661 + MGP_NODShiLtJ_P0061005 Plrg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061006.1 MGP_NODShiLtJ_G0027149.1 mouse_genomes_project 3 95298443 95315544 + MGP_NODShiLtJ_P0061006 Plrg1 protein_coding protein_coding MGP_NODShiLtJ_T0061007.1 MGP_NODShiLtJ_G0027149.1 mouse_genomes_project 3 95311417 95312439 + Plrg1 protein_coding retained_intron MGP_NODShiLtJ_T0061008.1 MGP_NODShiLtJ_G0027149.1 mouse_genomes_project 3 95312346 95313538 + Plrg1 protein_coding retained_intron MGP_NODShiLtJ_T0011426.1 MGP_NODShiLtJ_G0009559.1 mouse_genomes_project 3 37286497 37286769 + Mir1897 misc_RNA misc_RNA MGP_NODShiLtJ_T0063940.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171430149 171443182 - MGP_NODShiLtJ_P0063940 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063941.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171430150 171576677 - MGP_NODShiLtJ_P0063941 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063942.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171430422 171437546 - MGP_NODShiLtJ_P0063942 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063943.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171430642 171576585 - MGP_NODShiLtJ_P0063943 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063944.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171430659 171612807 - MGP_NODShiLtJ_P0063944 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063945.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171430659 171612807 - MGP_NODShiLtJ_P0063945 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063946.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171431506 171576701 - MGP_NODShiLtJ_P0063946 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063947.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171431659 171576714 - MGP_NODShiLtJ_P0063947 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063948.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171431659 171576714 - MGP_NODShiLtJ_P0063948 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063949.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171431659 171576714 - MGP_NODShiLtJ_P0063949 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063950.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171431659 171576714 - MGP_NODShiLtJ_P0063950 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063951.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171431740 171475423 - MGP_NODShiLtJ_P0063951 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063952.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171432288 171448676 - MGP_NODShiLtJ_P0063952 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063953.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171432311 171450242 - MGP_NODShiLtJ_P0063953 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063954.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171432330 171440957 - MGP_NODShiLtJ_P0063954 Adgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0063955.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171434886 171439741 - Adgrl2 protein_coding retained_intron MGP_NODShiLtJ_T0063956.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171441732 171450376 - Adgrl2 protein_coding retained_intron MGP_NODShiLtJ_T0063957.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171477228 171576562 - MGP_NODShiLtJ_P0063957 Adgrl2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063958.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171508796 171611568 - Adgrl2 protein_coding retained_intron MGP_NODShiLtJ_T0063959.1 MGP_NODShiLtJ_G0027797.1 mouse_genomes_project 3 171574933 171611734 - Adgrl2 protein_coding retained_intron MGP_NODShiLtJ_T0004331.1 MGP_NODShiLtJ_G0003775.1 mouse_genomes_project 3 158833375 158835578 - Gm43087 antisense antisense MGP_NODShiLtJ_T0100460.1 MGP_NODShiLtJ_G0038854.1 mouse_genomes_project 3 88273809 88273886 - Gm23644 snoRNA snoRNA MGP_NODShiLtJ_T0014007.1 MGP_NODShiLtJ_G0012115.1 mouse_genomes_project 3 89382461 89382833 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014106.1 MGP_NODShiLtJ_G0012214.1 mouse_genomes_project 3 119539122 119539837 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010464.1 MGP_NODShiLtJ_G0008597.1 mouse_genomes_project 3 174121758 174121829 - Mir3963 miRNA miRNA MGP_NODShiLtJ_T0004246.1 MGP_NODShiLtJ_G0003720.1 mouse_genomes_project 3 110318406 110323359 - Gm17690 antisense antisense MGP_NODShiLtJ_T0004247.1 MGP_NODShiLtJ_G0003720.1 mouse_genomes_project 3 110322319 110323361 - Gm17690 antisense antisense MGP_NODShiLtJ_T0100473.1 MGP_NODShiLtJ_G0038867.1 mouse_genomes_project 3 103232723 103232855 + Gm23723 snoRNA snoRNA MGP_NODShiLtJ_T0062742.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122074637 122140215 + MGP_NODShiLtJ_P0062742 Lrif1 protein_coding protein_coding MGP_NODShiLtJ_T0062743.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122074648 122136508 + Lrif1 protein_coding processed_transcript MGP_NODShiLtJ_T0062744.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122126485 122136521 + MGP_NODShiLtJ_P0062744 Lrif1 protein_coding protein_coding MGP_NODShiLtJ_T0062745.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122126650 122138693 + MGP_NODShiLtJ_P0062745 Lrif1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062746.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122126650 122140899 + MGP_NODShiLtJ_P0062746 Lrif1 protein_coding protein_coding MGP_NODShiLtJ_T0062747.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122126665 122136359 + MGP_NODShiLtJ_P0062747 Lrif1 protein_coding protein_coding MGP_NODShiLtJ_T0062748.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122126682 122138929 + Lrif1 protein_coding retained_intron MGP_NODShiLtJ_T0062749.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122126683 122137897 + Lrif1 protein_coding processed_transcript MGP_NODShiLtJ_T0062750.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122126693 122140896 + MGP_NODShiLtJ_P0062750 Lrif1 protein_coding protein_coding MGP_NODShiLtJ_T0062751.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122126724 122136373 + MGP_NODShiLtJ_P0062751 Lrif1 protein_coding protein_coding MGP_NODShiLtJ_T0062752.1 MGP_NODShiLtJ_G0027553.1 mouse_genomes_project 3 122137223 122138137 + Lrif1 protein_coding retained_intron MGP_NODShiLtJ_T0101119.1 MGP_NODShiLtJ_G0039459.1 mouse_genomes_project 3 108220126 108220823 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101120.1 MGP_NODShiLtJ_G0039459.1 mouse_genomes_project 3 108220302 108221065 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0014221.1 MGP_NODShiLtJ_G0012329.1 mouse_genomes_project 3 160566298 160566742 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063823.1 MGP_NODShiLtJ_G0027773.1 mouse_genomes_project 3 167226656 167257791 - MGP_NODShiLtJ_P0063823 Clca2 protein_coding protein_coding MGP_NODShiLtJ_T0063824.1 MGP_NODShiLtJ_G0027773.1 mouse_genomes_project 3 167228150 167257793 - MGP_NODShiLtJ_P0063824 Clca2 protein_coding protein_coding MGP_NODShiLtJ_T0063825.1 MGP_NODShiLtJ_G0027773.1 mouse_genomes_project 3 167257530 167258130 - Clca2 protein_coding processed_transcript MGP_NODShiLtJ_T0060914.1 MGP_NODShiLtJ_G0027126.1 mouse_genomes_project 3 91015648 91118026 + MGP_NODShiLtJ_P0060914 protein_coding protein_coding MGP_NODShiLtJ_T0060915.1 MGP_NODShiLtJ_G0027126.1 mouse_genomes_project 3 91026615 91157263 + MGP_NODShiLtJ_P0060915 protein_coding protein_coding MGP_NODShiLtJ_T0060916.1 MGP_NODShiLtJ_G0027126.1 mouse_genomes_project 3 91026618 91119284 + MGP_NODShiLtJ_P0060916 protein_coding protein_coding MGP_NODShiLtJ_T0007607.1 MGP_NODShiLtJ_G0006218.1 mouse_genomes_project 3 133971392 133973690 + Gm43202 lincRNA lincRNA MGP_NODShiLtJ_T0001181.1 MGP_NODShiLtJ_G0001102.1 mouse_genomes_project 3 59508138 59510805 + TEC TEC MGP_NODShiLtJ_T0060731.1 MGP_NODShiLtJ_G0027078.1 mouse_genomes_project 3 72117042 72148852 - MGP_NODShiLtJ_P0060731 protein_coding protein_coding MGP_NODShiLtJ_T0010447.1 MGP_NODShiLtJ_G0008580.1 mouse_genomes_project 3 141006273 141006392 - Mir760 miRNA miRNA MGP_NODShiLtJ_T0063826.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276122 167279916 + Odf2l protein_coding retained_intron MGP_NODShiLtJ_T0063827.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276123 167316004 + MGP_NODShiLtJ_P0063827 Odf2l protein_coding protein_coding MGP_NODShiLtJ_T0063828.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276123 167316024 + MGP_NODShiLtJ_P0063828 Odf2l protein_coding protein_coding MGP_NODShiLtJ_T0063829.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276134 167294909 + Odf2l protein_coding retained_intron MGP_NODShiLtJ_T0063830.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276134 167315994 + MGP_NODShiLtJ_P0063830 Odf2l protein_coding protein_coding MGP_NODShiLtJ_T0063831.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276142 167294820 + Odf2l protein_coding retained_intron MGP_NODShiLtJ_T0063832.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276154 167315998 + MGP_NODShiLtJ_P0063832 Odf2l protein_coding protein_coding MGP_NODShiLtJ_T0063833.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276155 167286539 + MGP_NODShiLtJ_P0063833 Odf2l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063834.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276508 167277164 + Odf2l protein_coding processed_transcript MGP_NODShiLtJ_T0063835.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167276508 167283676 + MGP_NODShiLtJ_P0063835 Odf2l protein_coding protein_coding MGP_NODShiLtJ_T0063836.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167278180 167286531 + MGP_NODShiLtJ_P0063836 Odf2l protein_coding protein_coding MGP_NODShiLtJ_T0063837.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167285391 167304326 + MGP_NODShiLtJ_P0063837 Odf2l protein_coding protein_coding MGP_NODShiLtJ_T0063838.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167290148 167310009 + Odf2l protein_coding retained_intron MGP_NODShiLtJ_T0063839.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167298551 167310009 + Odf2l protein_coding retained_intron MGP_NODShiLtJ_T0063840.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167298760 167306110 + Odf2l protein_coding processed_transcript MGP_NODShiLtJ_T0063841.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167298769 167316002 + Odf2l protein_coding retained_intron MGP_NODShiLtJ_T0063842.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167298791 167309961 + MGP_NODShiLtJ_P0063842 Odf2l protein_coding protein_coding MGP_NODShiLtJ_T0063843.1 MGP_NODShiLtJ_G0027774.1 mouse_genomes_project 3 167309949 167314543 + MGP_NODShiLtJ_P0063843 Odf2l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062235.1 MGP_NODShiLtJ_G0027424.1 mouse_genomes_project 3 110323276 110327874 + MGP_NODShiLtJ_P0062235 protein_coding protein_coding MGP_NODShiLtJ_T0062236.1 MGP_NODShiLtJ_G0027424.1 mouse_genomes_project 3 110323669 110324480 + protein_coding retained_intron MGP_NODShiLtJ_T0060546.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 61921687 62240592 + MGP_NODShiLtJ_P0060546 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060547.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 61921849 62240588 + MGP_NODShiLtJ_P0060547 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060548.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 61921849 62169380 + MGP_NODShiLtJ_P0060548 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060549.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 61926370 61939874 + MGP_NODShiLtJ_P0060549 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060550.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 61926578 61939844 + Dclk1 protein_coding retained_intron MGP_NODShiLtJ_T0060551.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62041980 62177121 + Dclk1 protein_coding processed_transcript MGP_NODShiLtJ_T0060552.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62146977 62179754 + Dclk1 protein_coding retained_intron MGP_NODShiLtJ_T0060553.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62158918 62169382 + MGP_NODShiLtJ_P0060553 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060554.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62158948 62240588 + MGP_NODShiLtJ_P0060554 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060555.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62159089 62237296 + MGP_NODShiLtJ_P0060555 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060556.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62159106 62217931 + MGP_NODShiLtJ_P0060556 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060557.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62159106 62235881 + MGP_NODShiLtJ_P0060557 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060558.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62159106 62237295 + MGP_NODShiLtJ_P0060558 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060559.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62159162 62223011 + MGP_NODShiLtJ_P0060559 Dclk1 protein_coding protein_coding MGP_NODShiLtJ_T0060561.1 MGP_NODShiLtJ_G0027035.1 mouse_genomes_project 3 62228619 62235059 + Dclk1 protein_coding processed_transcript MGP_NODShiLtJ_T0100493.1 MGP_NODShiLtJ_G0038887.1 mouse_genomes_project 3 146619516 146619648 + Gm25501 snoRNA snoRNA MGP_NODShiLtJ_T0063105.1 MGP_NODShiLtJ_G0027637.1 mouse_genomes_project 3 135279788 135326412 - MGP_NODShiLtJ_P0063105 Plppr4 protein_coding protein_coding MGP_NODShiLtJ_T0063106.1 MGP_NODShiLtJ_G0027637.1 mouse_genomes_project 3 135283025 135326412 - Plppr4 protein_coding retained_intron MGP_NODShiLtJ_T0063107.1 MGP_NODShiLtJ_G0027637.1 mouse_genomes_project 3 135283824 135325784 - MGP_NODShiLtJ_P0063107 Plppr4 protein_coding protein_coding MGP_NODShiLtJ_T0001081.1 MGP_NODShiLtJ_G0001005.1 mouse_genomes_project 3 2782786 2785300 + TEC TEC MGP_NODShiLtJ_T0001082.1 MGP_NODShiLtJ_G0001005.1 mouse_genomes_project 3 2784846 2785179 + TEC TEC MGP_NODShiLtJ_T0004203.1 MGP_NODShiLtJ_G0003690.1 mouse_genomes_project 3 73542513 73568158 - A730090N16Rik antisense antisense MGP_NODShiLtJ_T0062436.1 MGP_NODShiLtJ_G0027487.1 mouse_genomes_project 3 115674826 115684339 + MGP_NODShiLtJ_P0062436 Trim45 protein_coding protein_coding MGP_NODShiLtJ_T0062437.1 MGP_NODShiLtJ_G0027487.1 mouse_genomes_project 3 115675099 115686648 + MGP_NODShiLtJ_P0062437 Trim45 protein_coding protein_coding MGP_NODShiLtJ_T0062438.1 MGP_NODShiLtJ_G0027487.1 mouse_genomes_project 3 115675117 115689557 + MGP_NODShiLtJ_P0062438 Trim45 protein_coding protein_coding MGP_NODShiLtJ_T0062439.1 MGP_NODShiLtJ_G0027487.1 mouse_genomes_project 3 115675544 115684694 + MGP_NODShiLtJ_P0062439 Trim45 protein_coding protein_coding MGP_NODShiLtJ_T0060617.1 MGP_NODShiLtJ_G0027050.1 mouse_genomes_project 3 65693808 65723412 - MGP_NODShiLtJ_P0060617 Erich6 protein_coding protein_coding MGP_NODShiLtJ_T0060618.1 MGP_NODShiLtJ_G0027050.1 mouse_genomes_project 3 65693818 65715972 - MGP_NODShiLtJ_P0060618 Erich6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101866.1 MGP_NODShiLtJ_G0040034.1 mouse_genomes_project 3 96118824 96139277 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001319.1 MGP_NODShiLtJ_G0001239.1 mouse_genomes_project 3 150963590 150964301 + TEC TEC MGP_NODShiLtJ_T0014229.1 MGP_NODShiLtJ_G0012337.1 mouse_genomes_project 3 164133045 164133183 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059756.1 MGP_NODShiLtJ_G0026883.1 mouse_genomes_project 3 8994920 9011456 - MGP_NODShiLtJ_P0059756 protein_coding protein_coding MGP_NODShiLtJ_T0059757.1 MGP_NODShiLtJ_G0026883.1 mouse_genomes_project 3 8994922 9000110 - protein_coding retained_intron MGP_NODShiLtJ_T0059758.1 MGP_NODShiLtJ_G0026883.1 mouse_genomes_project 3 8995586 9011452 - MGP_NODShiLtJ_P0059758 protein_coding protein_coding MGP_NODShiLtJ_T0059759.1 MGP_NODShiLtJ_G0026883.1 mouse_genomes_project 3 8995649 9011456 - MGP_NODShiLtJ_P0059759 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059760.1 MGP_NODShiLtJ_G0026883.1 mouse_genomes_project 3 8996199 9007514 - MGP_NODShiLtJ_P0059760 protein_coding protein_coding MGP_NODShiLtJ_T0059761.1 MGP_NODShiLtJ_G0026883.1 mouse_genomes_project 3 9000040 9001803 - protein_coding retained_intron MGP_NODShiLtJ_T0059762.1 MGP_NODShiLtJ_G0026883.1 mouse_genomes_project 3 9001314 9011453 - protein_coding processed_transcript MGP_NODShiLtJ_T0059763.1 MGP_NODShiLtJ_G0026883.1 mouse_genomes_project 3 9010629 9011455 - protein_coding processed_transcript MGP_NODShiLtJ_T0001164.1 MGP_NODShiLtJ_G0001087.1 mouse_genomes_project 3 57981588 57982689 + TEC TEC MGP_NODShiLtJ_T0001261.1 MGP_NODShiLtJ_G0001182.1 mouse_genomes_project 3 128094834 128104928 + TEC TEC MGP_NODShiLtJ_T0060031.1 MGP_NODShiLtJ_G0026944.1 mouse_genomes_project 3 33360769 33420616 + MGP_NODShiLtJ_P0060031 Prkci protein_coding protein_coding MGP_NODShiLtJ_T0060032.1 MGP_NODShiLtJ_G0026944.1 mouse_genomes_project 3 33370770 33400266 + MGP_NODShiLtJ_P0060032 Prkci protein_coding protein_coding MGP_NODShiLtJ_T0060033.1 MGP_NODShiLtJ_G0026944.1 mouse_genomes_project 3 33397474 33406152 + Prkci protein_coding processed_transcript MGP_NODShiLtJ_T0060034.1 MGP_NODShiLtJ_G0026944.1 mouse_genomes_project 3 33405204 33407979 + MGP_NODShiLtJ_P0060034 Prkci protein_coding protein_coding MGP_NODShiLtJ_T0060035.1 MGP_NODShiLtJ_G0026944.1 mouse_genomes_project 3 33405269 33406724 + Prkci protein_coding retained_intron MGP_NODShiLtJ_T0013812.1 MGP_NODShiLtJ_G0011920.1 mouse_genomes_project 3 14278759 14286651 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060054.1 MGP_NODShiLtJ_G0026951.1 mouse_genomes_project 3 34934242 34954482 - MGP_NODShiLtJ_P0060054 Kcnmb3 protein_coding protein_coding MGP_NODShiLtJ_T0062254.1 MGP_NODShiLtJ_G0027436.1 mouse_genomes_project 3 110758003 110761930 + MGP_NODShiLtJ_P0062254 Txnip protein_coding protein_coding MGP_NODShiLtJ_T0062255.1 MGP_NODShiLtJ_G0027436.1 mouse_genomes_project 3 110758006 110761904 + MGP_NODShiLtJ_P0062255 Txnip protein_coding protein_coding MGP_NODShiLtJ_T0062256.1 MGP_NODShiLtJ_G0027436.1 mouse_genomes_project 3 110759544 110760060 + Txnip protein_coding retained_intron MGP_NODShiLtJ_T0062257.1 MGP_NODShiLtJ_G0027436.1 mouse_genomes_project 3 110759557 110760251 + Txnip protein_coding processed_transcript MGP_NODShiLtJ_T0062258.1 MGP_NODShiLtJ_G0027436.1 mouse_genomes_project 3 110759769 110761905 + Txnip protein_coding processed_transcript MGP_NODShiLtJ_T0062259.1 MGP_NODShiLtJ_G0027436.1 mouse_genomes_project 3 110760100 110760612 + Txnip protein_coding retained_intron MGP_NODShiLtJ_T0001288.1 MGP_NODShiLtJ_G0001209.1 mouse_genomes_project 3 146199683 146202561 + TEC TEC MGP_NODShiLtJ_T0062440.1 MGP_NODShiLtJ_G0027488.1 mouse_genomes_project 3 115691500 115724366 - MGP_NODShiLtJ_P0062440 Ttf2 protein_coding protein_coding MGP_NODShiLtJ_T0062441.1 MGP_NODShiLtJ_G0027488.1 mouse_genomes_project 3 115694496 115699000 - Ttf2 protein_coding retained_intron MGP_NODShiLtJ_T0062442.1 MGP_NODShiLtJ_G0027488.1 mouse_genomes_project 3 115698992 115724366 - Ttf2 protein_coding retained_intron MGP_NODShiLtJ_T0062443.1 MGP_NODShiLtJ_G0027488.1 mouse_genomes_project 3 115700105 115706188 - MGP_NODShiLtJ_P0062443 Ttf2 protein_coding protein_coding MGP_NODShiLtJ_T0062444.1 MGP_NODShiLtJ_G0027488.1 mouse_genomes_project 3 115712347 115713585 - Ttf2 protein_coding retained_intron MGP_NODShiLtJ_T0063216.1 MGP_NODShiLtJ_G0027655.1 mouse_genomes_project 3 141266586 141292995 - MGP_NODShiLtJ_P0063216 Fnbp1l protein_coding protein_coding MGP_NODShiLtJ_T0063217.1 MGP_NODShiLtJ_G0027655.1 mouse_genomes_project 3 141266592 141351569 - MGP_NODShiLtJ_P0063217 Fnbp1l protein_coding protein_coding MGP_NODShiLtJ_T0063218.1 MGP_NODShiLtJ_G0027655.1 mouse_genomes_project 3 141270001 141351407 - MGP_NODShiLtJ_P0063218 Fnbp1l protein_coding protein_coding MGP_NODShiLtJ_T0063219.1 MGP_NODShiLtJ_G0027655.1 mouse_genomes_project 3 141275964 141283782 - Fnbp1l protein_coding retained_intron MGP_NODShiLtJ_T0063220.1 MGP_NODShiLtJ_G0027655.1 mouse_genomes_project 3 141287022 141288358 - Fnbp1l protein_coding retained_intron MGP_NODShiLtJ_T0062096.1 MGP_NODShiLtJ_G0027401.1 mouse_genomes_project 3 109326316 109372986 - Setdb1 protein_coding retained_intron MGP_NODShiLtJ_T0062097.1 MGP_NODShiLtJ_G0027401.1 mouse_genomes_project 3 109326316 109372987 - MGP_NODShiLtJ_P0062097 Setdb1 protein_coding protein_coding MGP_NODShiLtJ_T0062098.1 MGP_NODShiLtJ_G0027401.1 mouse_genomes_project 3 109326316 109373033 - MGP_NODShiLtJ_P0062098 Setdb1 protein_coding protein_coding MGP_NODShiLtJ_T0062099.1 MGP_NODShiLtJ_G0027401.1 mouse_genomes_project 3 109326316 109373031 - MGP_NODShiLtJ_P0062099 Setdb1 protein_coding protein_coding MGP_NODShiLtJ_T0062100.1 MGP_NODShiLtJ_G0027401.1 mouse_genomes_project 3 109346280 109372987 - Setdb1 protein_coding retained_intron MGP_NODShiLtJ_T0062101.1 MGP_NODShiLtJ_G0027401.1 mouse_genomes_project 3 109371414 109372920 - Setdb1 protein_coding retained_intron MGP_NODShiLtJ_T0063064.1 MGP_NODShiLtJ_G0027629.1 mouse_genomes_project 3 134426174 134455509 + MGP_NODShiLtJ_P0063064 Sass6 protein_coding protein_coding MGP_NODShiLtJ_T0063065.1 MGP_NODShiLtJ_G0027629.1 mouse_genomes_project 3 134426195 134438658 + Sass6 protein_coding processed_transcript MGP_NODShiLtJ_T0063066.1 MGP_NODShiLtJ_G0027629.1 mouse_genomes_project 3 134426204 134466041 + MGP_NODShiLtJ_P0063066 Sass6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063067.1 MGP_NODShiLtJ_G0027629.1 mouse_genomes_project 3 134426306 134463512 + MGP_NODShiLtJ_P0063067 Sass6 protein_coding protein_coding MGP_NODShiLtJ_T0063069.1 MGP_NODShiLtJ_G0027629.1 mouse_genomes_project 3 134447230 134453159 + Sass6 protein_coding processed_transcript MGP_NODShiLtJ_T0063071.1 MGP_NODShiLtJ_G0027629.1 mouse_genomes_project 3 134455365 134462259 + Sass6 protein_coding retained_intron MGP_NODShiLtJ_T0063072.1 MGP_NODShiLtJ_G0027629.1 mouse_genomes_project 3 134459872 134463830 + Sass6 protein_coding retained_intron MGP_NODShiLtJ_T0098317.1 MGP_NODShiLtJ_G0036722.1 mouse_genomes_project 3 103135809 103137330 + Gm16540 sense_intronic sense_intronic MGP_NODShiLtJ_T0062709.1 MGP_NODShiLtJ_G0027545.1 mouse_genomes_project 3 121282683 121290683 - MGP_NODShiLtJ_P0062709 Chil5 protein_coding protein_coding MGP_NODShiLtJ_T0062710.1 MGP_NODShiLtJ_G0027545.1 mouse_genomes_project 3 121282729 121290688 - MGP_NODShiLtJ_P0062710 Chil5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062711.1 MGP_NODShiLtJ_G0027545.1 mouse_genomes_project 3 121282896 121297752 - MGP_NODShiLtJ_P0062711 Chil5 protein_coding protein_coding MGP_NODShiLtJ_T0014000.1 MGP_NODShiLtJ_G0012108.1 mouse_genomes_project 3 84755750 84756216 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013820.1 MGP_NODShiLtJ_G0011928.1 mouse_genomes_project 3 17486905 17487239 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013827.1 MGP_NODShiLtJ_G0011935.1 mouse_genomes_project 3 19151296 19152498 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007523.1 MGP_NODShiLtJ_G0006154.1 mouse_genomes_project 3 92880215 92891194 + Gm42468 lincRNA lincRNA MGP_NODShiLtJ_T0013849.1 MGP_NODShiLtJ_G0011957.1 mouse_genomes_project 3 29216627 29217015 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014099.1 MGP_NODShiLtJ_G0012207.1 mouse_genomes_project 3 117746837 117747245 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017821.1 MGP_NODShiLtJ_G0015378.1 mouse_genomes_project 3 108244285 108248633 - Gm36070 processed_transcript lincRNA MGP_NODShiLtJ_T0017822.1 MGP_NODShiLtJ_G0015378.1 mouse_genomes_project 3 108245104 108247003 - Gm36070 processed_transcript retained_intron MGP_NODShiLtJ_T0100455.1 MGP_NODShiLtJ_G0038849.1 mouse_genomes_project 3 73064726 73064852 - Gm25222 snoRNA snoRNA MGP_NODShiLtJ_T0100442.1 MGP_NODShiLtJ_G0038836.1 mouse_genomes_project 3 40804223 40804332 - Gm26404 snoRNA snoRNA MGP_NODShiLtJ_T0098311.1 MGP_NODShiLtJ_G0036717.1 mouse_genomes_project 3 20427362 20427958 + BC002189 sense_intronic sense_intronic MGP_NODShiLtJ_T0063408.1 MGP_NODShiLtJ_G0027688.1 mouse_genomes_project 3 149790485 149810740 - MGP_NODShiLtJ_P0063408 Rrh protein_coding protein_coding MGP_NODShiLtJ_T0063409.1 MGP_NODShiLtJ_G0027688.1 mouse_genomes_project 3 149790486 149810740 - Rrh protein_coding processed_transcript MGP_NODShiLtJ_T0063410.1 MGP_NODShiLtJ_G0027688.1 mouse_genomes_project 3 149794673 149810752 - MGP_NODShiLtJ_P0063410 Rrh protein_coding protein_coding MGP_NODShiLtJ_T0063411.1 MGP_NODShiLtJ_G0027688.1 mouse_genomes_project 3 149794676 149810738 - MGP_NODShiLtJ_P0063411 Rrh protein_coding protein_coding MGP_NODShiLtJ_T0063412.1 MGP_NODShiLtJ_G0027688.1 mouse_genomes_project 3 149794902 149810834 - MGP_NODShiLtJ_P0063412 Rrh protein_coding protein_coding MGP_NODShiLtJ_T0063413.1 MGP_NODShiLtJ_G0027688.1 mouse_genomes_project 3 149795010 149810709 - MGP_NODShiLtJ_P0063413 Rrh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063414.1 MGP_NODShiLtJ_G0027688.1 mouse_genomes_project 3 149802140 149810741 - Rrh protein_coding processed_transcript MGP_NODShiLtJ_T0063415.1 MGP_NODShiLtJ_G0027688.1 mouse_genomes_project 3 149807750 149810705 - Rrh protein_coding retained_intron MGP_NODShiLtJ_T0007685.1 MGP_NODShiLtJ_G0006282.1 mouse_genomes_project 3 165827878 165906750 - Gm42707 lincRNA lincRNA MGP_NODShiLtJ_T0007687.1 MGP_NODShiLtJ_G0006282.1 mouse_genomes_project 3 165864390 165906375 - Gm42707 lincRNA lincRNA MGP_NODShiLtJ_T0004178.1 MGP_NODShiLtJ_G0003670.1 mouse_genomes_project 3 41969867 41985599 - C230034O21Rik antisense antisense MGP_NODShiLtJ_T0013949.1 MGP_NODShiLtJ_G0012057.1 mouse_genomes_project 3 66986010 66986410 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061859.1 MGP_NODShiLtJ_G0027354.1 mouse_genomes_project 3 107149111 107157520 + MGP_NODShiLtJ_P0061859 Tchh protein_coding protein_coding MGP_NODShiLtJ_T0101127.1 MGP_NODShiLtJ_G0039463.1 mouse_genomes_project 3 143210046 143210476 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0001129.1 MGP_NODShiLtJ_G0001052.1 mouse_genomes_project 3 40632089 40634166 - TEC TEC MGP_NODShiLtJ_T0060687.1 MGP_NODShiLtJ_G0027068.1 mouse_genomes_project 3 68917129 68920831 - MGP_NODShiLtJ_P0060687 B430305J03Rik protein_coding protein_coding MGP_NODShiLtJ_T0059831.1 MGP_NODShiLtJ_G0026907.1 mouse_genomes_project 3 20235696 20342907 + MGP_NODShiLtJ_P0059831 Dnajc5b protein_coding protein_coding MGP_NODShiLtJ_T0059832.1 MGP_NODShiLtJ_G0026907.1 mouse_genomes_project 3 20235716 20343037 + MGP_NODShiLtJ_P0059832 Dnajc5b protein_coding protein_coding MGP_NODShiLtJ_T0059833.1 MGP_NODShiLtJ_G0026907.1 mouse_genomes_project 3 20258763 20342925 + MGP_NODShiLtJ_P0059833 Dnajc5b protein_coding protein_coding MGP_NODShiLtJ_T0059834.1 MGP_NODShiLtJ_G0026907.1 mouse_genomes_project 3 20259339 20343036 + MGP_NODShiLtJ_P0059834 Dnajc5b protein_coding protein_coding MGP_NODShiLtJ_T0001218.1 MGP_NODShiLtJ_G0001139.1 mouse_genomes_project 3 88983492 88990886 - TEC TEC MGP_NODShiLtJ_T0013996.1 MGP_NODShiLtJ_G0012104.1 mouse_genomes_project 3 81664030 81664249 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062860.1 MGP_NODShiLtJ_G0027586.1 mouse_genomes_project 3 123769725 123774873 - MGP_NODShiLtJ_P0062860 Cyb561d1 protein_coding protein_coding MGP_NODShiLtJ_T0062861.1 MGP_NODShiLtJ_G0027586.1 mouse_genomes_project 3 123769809 123775251 - Cyb561d1 protein_coding processed_transcript MGP_NODShiLtJ_T0062862.1 MGP_NODShiLtJ_G0027586.1 mouse_genomes_project 3 123769809 123774873 - MGP_NODShiLtJ_P0062862 Cyb561d1 protein_coding protein_coding MGP_NODShiLtJ_T0062863.1 MGP_NODShiLtJ_G0027586.1 mouse_genomes_project 3 123772311 123774634 - MGP_NODShiLtJ_P0062863 Cyb561d1 protein_coding protein_coding MGP_NODShiLtJ_T0004352.1 MGP_NODShiLtJ_G0003791.1 mouse_genomes_project 3 177286308 177303617 - Asb17os antisense antisense MGP_NODShiLtJ_T0004353.1 MGP_NODShiLtJ_G0003791.1 mouse_genomes_project 3 177300655 177303640 - Asb17os antisense antisense MGP_NODShiLtJ_T0062900.1 MGP_NODShiLtJ_G0027595.1 mouse_genomes_project 3 124043991 124146061 - MGP_NODShiLtJ_P0062900 5330417C22Rik protein_coding protein_coding MGP_NODShiLtJ_T0062901.1 MGP_NODShiLtJ_G0027595.1 mouse_genomes_project 3 124046371 124146137 - MGP_NODShiLtJ_P0062901 5330417C22Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062902.1 MGP_NODShiLtJ_G0027595.1 mouse_genomes_project 3 124046477 124146473 - MGP_NODShiLtJ_P0062902 5330417C22Rik protein_coding protein_coding MGP_NODShiLtJ_T0062903.1 MGP_NODShiLtJ_G0027595.1 mouse_genomes_project 3 124052639 124054068 - 5330417C22Rik protein_coding retained_intron MGP_NODShiLtJ_T0062904.1 MGP_NODShiLtJ_G0027595.1 mouse_genomes_project 3 124056894 124059206 - 5330417C22Rik protein_coding retained_intron MGP_NODShiLtJ_T0062905.1 MGP_NODShiLtJ_G0027595.1 mouse_genomes_project 3 124081002 124146072 - 5330417C22Rik protein_coding retained_intron MGP_NODShiLtJ_T0060391.1 MGP_NODShiLtJ_G0027004.1 mouse_genomes_project 3 56090874 56721958 - MGP_NODShiLtJ_P0060391 Slc7a11 protein_coding protein_coding MGP_NODShiLtJ_T0060392.1 MGP_NODShiLtJ_G0027004.1 mouse_genomes_project 3 56631606 56721955 - MGP_NODShiLtJ_P0060392 Slc7a11 protein_coding protein_coding MGP_NODShiLtJ_T0060393.1 MGP_NODShiLtJ_G0027004.1 mouse_genomes_project 3 56638036 56641164 - Slc7a11 protein_coding processed_transcript MGP_NODShiLtJ_T0060394.1 MGP_NODShiLtJ_G0027004.1 mouse_genomes_project 3 56690109 56721958 - Slc7a11 protein_coding retained_intron MGP_NODShiLtJ_T0060395.1 MGP_NODShiLtJ_G0027004.1 mouse_genomes_project 3 56717671 56721949 - Slc7a11 protein_coding retained_intron MGP_NODShiLtJ_T0013856.1 MGP_NODShiLtJ_G0011964.1 mouse_genomes_project 3 33334708 33335171 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013959.1 MGP_NODShiLtJ_G0012067.1 mouse_genomes_project 3 70744679 70745890 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001080.1 MGP_NODShiLtJ_G0001004.1 mouse_genomes_project 3 189675 189802 + TEC TEC MGP_NODShiLtJ_T0099168.1 MGP_NODShiLtJ_G0037562.1 mouse_genomes_project 3 60348953 60349056 + Gm24851 snRNA snRNA MGP_NODShiLtJ_T0098329.1 MGP_NODShiLtJ_G0036734.1 mouse_genomes_project 3 115398401 115400205 - Gm43463 sense_intronic sense_intronic MGP_NODShiLtJ_T0060523.1 MGP_NODShiLtJ_G0027030.1 mouse_genomes_project 3 61543608 61561959 - MGP_NODShiLtJ_P0060523 Sertm1 protein_coding protein_coding MGP_NODShiLtJ_T0060524.1 MGP_NODShiLtJ_G0027030.1 mouse_genomes_project 3 61543611 61562815 - MGP_NODShiLtJ_P0060524 Sertm1 protein_coding protein_coding MGP_NODShiLtJ_T0101896.1 MGP_NODShiLtJ_G0040064.1 mouse_genomes_project 3 123487445 123489772 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0062506.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 117984502 118023495 + MGP_NODShiLtJ_P0062506 Csde1 protein_coding protein_coding MGP_NODShiLtJ_T0062507.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 117984542 118025088 + MGP_NODShiLtJ_P0062507 Csde1 protein_coding protein_coding MGP_NODShiLtJ_T0062508.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 117984548 118025283 + MGP_NODShiLtJ_P0062508 Csde1 protein_coding protein_coding MGP_NODShiLtJ_T0062509.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 117984555 118024799 + MGP_NODShiLtJ_P0062509 Csde1 protein_coding protein_coding MGP_NODShiLtJ_T0062510.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 117984599 118024901 + MGP_NODShiLtJ_P0062510 Csde1 protein_coding protein_coding MGP_NODShiLtJ_T0062511.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 117994029 118009428 + Csde1 protein_coding retained_intron MGP_NODShiLtJ_T0062512.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 117994122 117995867 + Csde1 protein_coding retained_intron MGP_NODShiLtJ_T0062513.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 117995192 118010556 + Csde1 protein_coding processed_transcript MGP_NODShiLtJ_T0062514.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 118006410 118011303 + Csde1 protein_coding processed_transcript MGP_NODShiLtJ_T0062515.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 118006669 118010735 + Csde1 protein_coding retained_intron MGP_NODShiLtJ_T0062516.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 118006698 118013374 + MGP_NODShiLtJ_P0062516 Csde1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062517.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 118009863 118024883 + MGP_NODShiLtJ_P0062517 Csde1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062518.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 118010212 118010905 + Csde1 protein_coding retained_intron MGP_NODShiLtJ_T0062519.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 118016571 118017643 + Csde1 protein_coding retained_intron MGP_NODShiLtJ_T0062520.1 MGP_NODShiLtJ_G0027504.1 mouse_genomes_project 3 118022615 118023694 + Csde1 protein_coding retained_intron MGP_NODShiLtJ_T0060363.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031646 45060293 + MGP_NODShiLtJ_P0060363 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060364.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031695 45057684 + MGP_NODShiLtJ_P0060364 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060365.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031698 45060283 + MGP_NODShiLtJ_P0060365 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060366.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031701 45060742 + MGP_NODShiLtJ_P0060366 D3Ertd751e protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060367.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031702 45060292 + MGP_NODShiLtJ_P0060367 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060368.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031702 45060292 + MGP_NODShiLtJ_P0060368 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060369.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031738 45060292 + MGP_NODShiLtJ_P0060369 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060370.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031740 45033004 + D3Ertd751e protein_coding retained_intron MGP_NODShiLtJ_T0060371.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031747 45059013 + MGP_NODShiLtJ_P0060371 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060372.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45031809 45055137 + MGP_NODShiLtJ_P0060372 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060373.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45033754 45057508 + MGP_NODShiLtJ_P0060373 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060374.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45047363 45057524 + MGP_NODShiLtJ_P0060374 D3Ertd751e protein_coding protein_coding MGP_NODShiLtJ_T0060375.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45047593 45060310 + MGP_NODShiLtJ_P0060375 D3Ertd751e protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060376.1 MGP_NODShiLtJ_G0027000.1 mouse_genomes_project 3 45049461 45057859 + D3Ertd751e protein_coding retained_intron MGP_NODShiLtJ_T0001086.1 MGP_NODShiLtJ_G0001009.1 mouse_genomes_project 3 8958518 8958848 + TEC TEC MGP_NODShiLtJ_T0010409.1 MGP_NODShiLtJ_G0008542.1 mouse_genomes_project 3 40198371 40200038 - miRNA miRNA MGP_NODShiLtJ_T0013960.1 MGP_NODShiLtJ_G0012068.1 mouse_genomes_project 3 71040953 71041572 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099224.1 MGP_NODShiLtJ_G0037618.1 mouse_genomes_project 3 152730263 152730369 - Gm25307 snRNA snRNA MGP_NODShiLtJ_T0098344.1 MGP_NODShiLtJ_G0036749.1 mouse_genomes_project 3 118906268 118908358 + Gm43065 sense_intronic sense_intronic MGP_NODShiLtJ_T0004310.1 MGP_NODShiLtJ_G0003760.1 mouse_genomes_project 3 146245173 146246889 - Gm15551 antisense antisense MGP_NODShiLtJ_T0001159.1 MGP_NODShiLtJ_G0001082.1 mouse_genomes_project 3 57712603 57712714 + TEC TEC MGP_NODShiLtJ_T0014233.1 MGP_NODShiLtJ_G0012341.1 mouse_genomes_project 3 166622880 166623442 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014199.1 MGP_NODShiLtJ_G0012307.1 mouse_genomes_project 3 155596254 155597657 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063108.1 MGP_NODShiLtJ_G0027638.1 mouse_genomes_project 3 135576553 135706832 + MGP_NODShiLtJ_P0063108 Plppr5 protein_coding protein_coding MGP_NODShiLtJ_T0063109.1 MGP_NODShiLtJ_G0027638.1 mouse_genomes_project 3 135576944 135706832 + MGP_NODShiLtJ_P0063109 Plppr5 protein_coding protein_coding MGP_NODShiLtJ_T0099159.1 MGP_NODShiLtJ_G0037553.1 mouse_genomes_project 3 38502452 38502557 + Gm25696 snRNA snRNA MGP_NODShiLtJ_T0007618.1 MGP_NODShiLtJ_G0006226.1 mouse_genomes_project 3 140292427 140300974 - A730020M07Rik lincRNA lincRNA MGP_NODShiLtJ_T0007619.1 MGP_NODShiLtJ_G0006226.1 mouse_genomes_project 3 140294617 140300977 - A730020M07Rik lincRNA lincRNA MGP_NODShiLtJ_T0007620.1 MGP_NODShiLtJ_G0006226.1 mouse_genomes_project 3 140294619 140300859 - A730020M07Rik lincRNA lincRNA MGP_NODShiLtJ_T0013942.1 MGP_NODShiLtJ_G0012050.1 mouse_genomes_project 3 65433863 65434280 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007393.1 MGP_NODShiLtJ_G0006055.1 mouse_genomes_project 3 8355038 8386424 + Gm16337 lincRNA lincRNA MGP_NODShiLtJ_T0014142.1 MGP_NODShiLtJ_G0012250.1 mouse_genomes_project 3 132352927 132353595 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063493.1 MGP_NODShiLtJ_G0027705.1 mouse_genomes_project 3 152854944 152875566 + MGP_NODShiLtJ_P0063493 Gimd1 protein_coding protein_coding MGP_NODShiLtJ_T0063494.1 MGP_NODShiLtJ_G0027705.1 mouse_genomes_project 3 152859478 152874847 + MGP_NODShiLtJ_P0063494 Gimd1 protein_coding protein_coding MGP_NODShiLtJ_T0098196.1 MGP_NODShiLtJ_G0036608.1 mouse_genomes_project 3 77666568 77666915 - Gm22009 scaRNA scaRNA MGP_NODShiLtJ_T0059801.1 MGP_NODShiLtJ_G0026897.1 mouse_genomes_project 3 15516117 15562262 - protein_coding retained_intron MGP_NODShiLtJ_T0059802.1 MGP_NODShiLtJ_G0026897.1 mouse_genomes_project 3 15516778 15562299 - MGP_NODShiLtJ_P0059802 protein_coding protein_coding MGP_NODShiLtJ_T0014077.1 MGP_NODShiLtJ_G0012185.1 mouse_genomes_project 3 111406429 111407033 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059838.1 MGP_NODShiLtJ_G0026910.1 mouse_genomes_project 3 20435661 20437657 - MGP_NODShiLtJ_P0059838 Crh protein_coding protein_coding MGP_NODShiLtJ_T0007693.1 MGP_NODShiLtJ_G0006288.1 mouse_genomes_project 3 168317674 168319078 + Gm43861 lincRNA lincRNA MGP_NODShiLtJ_T0014216.1 MGP_NODShiLtJ_G0012324.1 mouse_genomes_project 3 159529230 159529599 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014158.1 MGP_NODShiLtJ_G0012266.1 mouse_genomes_project 3 139897549 139898321 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061596.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103005264 103031796 - MGP_NODShiLtJ_P0061596 Atp8b2 protein_coding protein_coding MGP_NODShiLtJ_T0061597.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103005264 103028917 - MGP_NODShiLtJ_P0061597 Atp8b2 protein_coding protein_coding MGP_NODShiLtJ_T0061598.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103005272 103021469 - Atp8b2 protein_coding retained_intron MGP_NODShiLtJ_T0061599.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103007359 103031567 - Atp8b2 protein_coding retained_intron MGP_NODShiLtJ_T0061600.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103008052 103031796 - MGP_NODShiLtJ_P0061600 Atp8b2 protein_coding protein_coding MGP_NODShiLtJ_T0061601.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103008400 103010981 - MGP_NODShiLtJ_P0061601 Atp8b2 protein_coding protein_coding MGP_NODShiLtJ_T0061602.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103010937 103012996 - Atp8b2 protein_coding retained_intron MGP_NODShiLtJ_T0061603.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103012401 103013705 - MGP_NODShiLtJ_P0061603 Atp8b2 protein_coding protein_coding MGP_NODShiLtJ_T0061604.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103013272 103013788 - Atp8b2 protein_coding retained_intron MGP_NODShiLtJ_T0061605.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103013668 103014584 - Atp8b2 protein_coding retained_intron MGP_NODShiLtJ_T0061606.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103013695 103015676 - MGP_NODShiLtJ_P0061606 Atp8b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061607.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103013759 103015806 - Atp8b2 protein_coding retained_intron MGP_NODShiLtJ_T0061608.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103015818 103017719 - Atp8b2 protein_coding retained_intron MGP_NODShiLtJ_T0061609.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103021942 103022743 - Atp8b2 protein_coding retained_intron MGP_NODShiLtJ_T0061610.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103022373 103027842 - MGP_NODShiLtJ_P0061610 Atp8b2 protein_coding protein_coding MGP_NODShiLtJ_T0061611.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103026295 103031402 - MGP_NODShiLtJ_P0061611 Atp8b2 protein_coding protein_coding MGP_NODShiLtJ_T0061612.1 MGP_NODShiLtJ_G0027264.1 mouse_genomes_project 3 103026841 103030103 - MGP_NODShiLtJ_P0061612 Atp8b2 protein_coding protein_coding MGP_NODShiLtJ_T0004270.1 MGP_NODShiLtJ_G0003736.1 mouse_genomes_project 3 119529739 119539045 + Gm43257 antisense antisense MGP_NODShiLtJ_T0063577.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156116522 156145327 + MGP_NODShiLtJ_P0063577 Ube2d3 protein_coding protein_coding MGP_NODShiLtJ_T0063578.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156116688 156145376 + MGP_NODShiLtJ_P0063578 Ube2d3 protein_coding protein_coding MGP_NODShiLtJ_T0063579.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156116901 156120642 + Ube2d3 protein_coding processed_transcript MGP_NODShiLtJ_T0063580.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156116905 156140087 + MGP_NODShiLtJ_P0063580 Ube2d3 protein_coding protein_coding MGP_NODShiLtJ_T0063581.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156116915 156143131 + MGP_NODShiLtJ_P0063581 Ube2d3 protein_coding protein_coding MGP_NODShiLtJ_T0063582.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156116937 156148065 + MGP_NODShiLtJ_P0063582 Ube2d3 protein_coding protein_coding MGP_NODShiLtJ_T0063583.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156117119 156134785 + MGP_NODShiLtJ_P0063583 Ube2d3 protein_coding protein_coding MGP_NODShiLtJ_T0063584.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156117126 156145387 + MGP_NODShiLtJ_P0063584 Ube2d3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063585.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156117236 156138255 + Ube2d3 protein_coding retained_intron MGP_NODShiLtJ_T0063586.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156118152 156148070 + MGP_NODShiLtJ_P0063586 Ube2d3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063587.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156134161 156140131 + Ube2d3 protein_coding retained_intron MGP_NODShiLtJ_T0063588.1 MGP_NODShiLtJ_G0027721.1 mouse_genomes_project 3 156138739 156140777 + Ube2d3 protein_coding retained_intron MGP_NODShiLtJ_T0062389.1 MGP_NODShiLtJ_G0027469.1 mouse_genomes_project 3 112783016 113247859 + Zfp697 protein_coding processed_transcript MGP_NODShiLtJ_T0062390.1 MGP_NODShiLtJ_G0027469.1 mouse_genomes_project 3 112783036 112817035 + MGP_NODShiLtJ_P0062390 Zfp697 protein_coding protein_coding MGP_NODShiLtJ_T0062391.1 MGP_NODShiLtJ_G0027469.1 mouse_genomes_project 3 112783103 112817035 + MGP_NODShiLtJ_P0062391 Zfp697 protein_coding protein_coding MGP_NODShiLtJ_T0010456.1 MGP_NODShiLtJ_G0008589.1 mouse_genomes_project 3 154714265 154714344 - Mir1895 miRNA miRNA MGP_NODShiLtJ_T0099213.1 MGP_NODShiLtJ_G0037607.1 mouse_genomes_project 3 119850988 119851078 + Gm24223 snRNA snRNA MGP_NODShiLtJ_T0014161.1 MGP_NODShiLtJ_G0012269.1 mouse_genomes_project 3 140534857 140535234 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101886.1 MGP_NODShiLtJ_G0040054.1 mouse_genomes_project 3 108155826 108156019 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100470.1 MGP_NODShiLtJ_G0038864.1 mouse_genomes_project 3 101570915 101571050 + Gm25945 snoRNA snoRNA MGP_NODShiLtJ_T0014005.1 MGP_NODShiLtJ_G0012113.1 mouse_genomes_project 3 87986743 87987573 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101123.1 MGP_NODShiLtJ_G0039461.1 mouse_genomes_project 3 110810434 110864263 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101124.1 MGP_NODShiLtJ_G0039461.1 mouse_genomes_project 3 110810437 110864262 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101125.1 MGP_NODShiLtJ_G0039461.1 mouse_genomes_project 3 110813727 110828109 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0001327.1 MGP_NODShiLtJ_G0001247.1 mouse_genomes_project 3 153325809 153327535 - TEC TEC MGP_NODShiLtJ_T0099221.1 MGP_NODShiLtJ_G0037615.1 mouse_genomes_project 3 143377386 143377496 + Gm22575 snRNA snRNA MGP_NODShiLtJ_T0014232.1 MGP_NODShiLtJ_G0012340.1 mouse_genomes_project 3 165818421 165819244 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013777.1 MGP_NODShiLtJ_G0011885.1 mouse_genomes_project 3 4092089 4095019 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063801.1 MGP_NODShiLtJ_G0027765.1 mouse_genomes_project 3 166567263 166597348 + protein_coding processed_transcript MGP_NODShiLtJ_T0063802.1 MGP_NODShiLtJ_G0027765.1 mouse_genomes_project 3 166567385 166597771 + MGP_NODShiLtJ_P0063802 protein_coding protein_coding MGP_NODShiLtJ_T0063803.1 MGP_NODShiLtJ_G0027765.1 mouse_genomes_project 3 166567652 166597752 + MGP_NODShiLtJ_P0063803 protein_coding protein_coding MGP_NODShiLtJ_T0063804.1 MGP_NODShiLtJ_G0027765.1 mouse_genomes_project 3 166567673 166570372 + protein_coding retained_intron MGP_NODShiLtJ_T0063805.1 MGP_NODShiLtJ_G0027765.1 mouse_genomes_project 3 166574611 166595523 + MGP_NODShiLtJ_P0063805 protein_coding protein_coding MGP_NODShiLtJ_T0063806.1 MGP_NODShiLtJ_G0027765.1 mouse_genomes_project 3 166590515 166591681 + protein_coding retained_intron MGP_NODShiLtJ_T0010457.1 MGP_NODShiLtJ_G0008590.1 mouse_genomes_project 3 155809854 155809960 + Gm24048 miRNA miRNA MGP_NODShiLtJ_T0063275.1 MGP_NODShiLtJ_G0027669.1 mouse_genomes_project 3 143558606 143584177 - MGP_NODShiLtJ_P0063275 1700003H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0063276.1 MGP_NODShiLtJ_G0027669.1 mouse_genomes_project 3 143558606 143584177 - MGP_NODShiLtJ_P0063276 1700003H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0063277.1 MGP_NODShiLtJ_G0027669.1 mouse_genomes_project 3 143569079 143584178 - MGP_NODShiLtJ_P0063277 1700003H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0063278.1 MGP_NODShiLtJ_G0027669.1 mouse_genomes_project 3 143576409 143584187 - MGP_NODShiLtJ_P0063278 1700003H04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063279.1 MGP_NODShiLtJ_G0027669.1 mouse_genomes_project 3 143576410 143581587 - MGP_NODShiLtJ_P0063279 1700003H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0063280.1 MGP_NODShiLtJ_G0027669.1 mouse_genomes_project 3 143576410 143584180 - MGP_NODShiLtJ_P0063280 1700003H04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007721.1 MGP_NODShiLtJ_G0006308.1 mouse_genomes_project 3 180405852 180424010 - 4930570G19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007722.1 MGP_NODShiLtJ_G0006308.1 mouse_genomes_project 3 180405860 180423905 - 4930570G19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007723.1 MGP_NODShiLtJ_G0006308.1 mouse_genomes_project 3 180407519 180423998 - 4930570G19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007724.1 MGP_NODShiLtJ_G0006308.1 mouse_genomes_project 3 180421680 180424069 - 4930570G19Rik lincRNA lincRNA MGP_NODShiLtJ_T0013935.1 MGP_NODShiLtJ_G0012043.1 mouse_genomes_project 3 64253733 64254780 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060604.1 MGP_NODShiLtJ_G0027046.1 mouse_genomes_project 3 65445122 65522878 + MGP_NODShiLtJ_P0060604 Tsc22d2 protein_coding protein_coding MGP_NODShiLtJ_T0060605.1 MGP_NODShiLtJ_G0027046.1 mouse_genomes_project 3 65445127 65517168 + MGP_NODShiLtJ_P0060605 Tsc22d2 protein_coding protein_coding MGP_NODShiLtJ_T0060606.1 MGP_NODShiLtJ_G0027046.1 mouse_genomes_project 3 65446285 65449307 + Tsc22d2 protein_coding retained_intron MGP_NODShiLtJ_T0060607.1 MGP_NODShiLtJ_G0027046.1 mouse_genomes_project 3 65447891 65515762 + MGP_NODShiLtJ_P0060607 Tsc22d2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063012.1 MGP_NODShiLtJ_G0027617.1 mouse_genomes_project 3 132455545 132747088 + MGP_NODShiLtJ_P0063012 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063013.1 MGP_NODShiLtJ_G0027617.1 mouse_genomes_project 3 132455697 132731197 + MGP_NODShiLtJ_P0063013 protein_coding protein_coding MGP_NODShiLtJ_T0063700.1 MGP_NODShiLtJ_G0027746.1 mouse_genomes_project 3 159481030 159512875 - MGP_NODShiLtJ_P0063700 Metap1 protein_coding protein_coding MGP_NODShiLtJ_T0063701.1 MGP_NODShiLtJ_G0027746.1 mouse_genomes_project 3 159481755 159491025 - MGP_NODShiLtJ_P0063701 Metap1 protein_coding protein_coding MGP_NODShiLtJ_T0063702.1 MGP_NODShiLtJ_G0027746.1 mouse_genomes_project 3 159488338 159497285 - Metap1 protein_coding retained_intron MGP_NODShiLtJ_T0063703.1 MGP_NODShiLtJ_G0027746.1 mouse_genomes_project 3 159488399 159497373 - Metap1 protein_coding retained_intron MGP_NODShiLtJ_T0063704.1 MGP_NODShiLtJ_G0027746.1 mouse_genomes_project 3 159491023 159503874 - Metap1 protein_coding processed_transcript MGP_NODShiLtJ_T0063705.1 MGP_NODShiLtJ_G0027746.1 mouse_genomes_project 3 159497628 159512759 - MGP_NODShiLtJ_P0063705 Metap1 protein_coding protein_coding MGP_NODShiLtJ_T0063706.1 MGP_NODShiLtJ_G0027746.1 mouse_genomes_project 3 159502347 159512729 - Metap1 protein_coding retained_intron MGP_NODShiLtJ_T0011441.1 MGP_NODShiLtJ_G0009574.1 mouse_genomes_project 3 143955960 143956258 + Gm23673 misc_RNA misc_RNA MGP_NODShiLtJ_T0062621.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119514606 119585417 - MGP_NODShiLtJ_P0062621 Lrig2 protein_coding protein_coding MGP_NODShiLtJ_T0062622.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119577899 119638964 - MGP_NODShiLtJ_P0062622 Lrig2 protein_coding protein_coding MGP_NODShiLtJ_T0062623.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119577900 119638952 - MGP_NODShiLtJ_P0062623 Lrig2 protein_coding protein_coding MGP_NODShiLtJ_T0062624.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119580475 119603785 - Lrig2 protein_coding retained_intron MGP_NODShiLtJ_T0062625.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119581033 119638980 - MGP_NODShiLtJ_P0062625 Lrig2 protein_coding protein_coding MGP_NODShiLtJ_T0062626.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119581249 119639042 - Lrig2 protein_coding retained_intron MGP_NODShiLtJ_T0062627.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119583110 119586729 - Lrig2 protein_coding retained_intron MGP_NODShiLtJ_T0062628.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119605186 119638785 - Lrig2 protein_coding retained_intron MGP_NODShiLtJ_T0062629.1 MGP_NODShiLtJ_G0027523.1 mouse_genomes_project 3 119616857 119617893 - Lrig2 protein_coding retained_intron MGP_NODShiLtJ_T0059930.1 MGP_NODShiLtJ_G0026927.1 mouse_genomes_project 3 29870686 29902338 - MGP_NODShiLtJ_P0059930 Tmem212 protein_coding protein_coding MGP_NODShiLtJ_T0061732.1 MGP_NODShiLtJ_G0027281.1 mouse_genomes_project 3 103648180 103661104 + Ilf2 protein_coding retained_intron MGP_NODShiLtJ_T0061733.1 MGP_NODShiLtJ_G0027281.1 mouse_genomes_project 3 103648194 103651352 + Ilf2 protein_coding retained_intron MGP_NODShiLtJ_T0061734.1 MGP_NODShiLtJ_G0027281.1 mouse_genomes_project 3 103648201 103654390 + Ilf2 protein_coding retained_intron MGP_NODShiLtJ_T0061735.1 MGP_NODShiLtJ_G0027281.1 mouse_genomes_project 3 103648201 103661520 + MGP_NODShiLtJ_P0061735 Ilf2 protein_coding protein_coding MGP_NODShiLtJ_T0061736.1 MGP_NODShiLtJ_G0027281.1 mouse_genomes_project 3 103648211 103658612 + Ilf2 protein_coding retained_intron MGP_NODShiLtJ_T0061737.1 MGP_NODShiLtJ_G0027281.1 mouse_genomes_project 3 103652777 103659533 + Ilf2 protein_coding retained_intron MGP_NODShiLtJ_T0007630.1 MGP_NODShiLtJ_G0006234.1 mouse_genomes_project 3 147588829 147594838 + Gm42586 lincRNA lincRNA MGP_NODShiLtJ_T0062476.1 MGP_NODShiLtJ_G0027498.1 mouse_genomes_project 3 117003590 117052807 - MGP_NODShiLtJ_P0062476 Vangl1 protein_coding protein_coding MGP_NODShiLtJ_T0062477.1 MGP_NODShiLtJ_G0027498.1 mouse_genomes_project 3 117005865 117014530 - MGP_NODShiLtJ_P0062477 Vangl1 protein_coding protein_coding MGP_NODShiLtJ_T0062478.1 MGP_NODShiLtJ_G0027498.1 mouse_genomes_project 3 117010783 117014573 - Vangl1 protein_coding retained_intron MGP_NODShiLtJ_T0062479.1 MGP_NODShiLtJ_G0027498.1 mouse_genomes_project 3 117010960 117013539 - Vangl1 protein_coding processed_transcript MGP_NODShiLtJ_T0062480.1 MGP_NODShiLtJ_G0027498.1 mouse_genomes_project 3 117031873 117046226 - MGP_NODShiLtJ_P0062480 Vangl1 protein_coding protein_coding MGP_NODShiLtJ_T0062481.1 MGP_NODShiLtJ_G0027498.1 mouse_genomes_project 3 117045142 117052151 - MGP_NODShiLtJ_P0062481 Vangl1 protein_coding protein_coding MGP_NODShiLtJ_T0014114.1 MGP_NODShiLtJ_G0012222.1 mouse_genomes_project 3 123305485 123306101 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062310.1 MGP_NODShiLtJ_G0027450.1 mouse_genomes_project 3 111051968 111085251 - MGP_NODShiLtJ_P0062310 Cd160 protein_coding protein_coding MGP_NODShiLtJ_T0062311.1 MGP_NODShiLtJ_G0027450.1 mouse_genomes_project 3 111051968 111085251 - MGP_NODShiLtJ_P0062311 Cd160 protein_coding protein_coding MGP_NODShiLtJ_T0062312.1 MGP_NODShiLtJ_G0027450.1 mouse_genomes_project 3 111053360 111069928 - MGP_NODShiLtJ_P0062312 Cd160 protein_coding protein_coding MGP_NODShiLtJ_T0098319.1 MGP_NODShiLtJ_G0036724.1 mouse_genomes_project 3 108430688 108432847 - Gm43773 sense_intronic sense_intronic MGP_NODShiLtJ_T0100484.1 MGP_NODShiLtJ_G0038878.1 mouse_genomes_project 3 128704592 128717322 - Gm25519 snoRNA snoRNA MGP_NODShiLtJ_T0013882.1 MGP_NODShiLtJ_G0011990.1 mouse_genomes_project 3 41244251 41244594 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063902.1 MGP_NODShiLtJ_G0027789.1 mouse_genomes_project 3 168831454 168839618 + MGP_NODShiLtJ_P0063902 Gng5 protein_coding protein_coding MGP_NODShiLtJ_T0063903.1 MGP_NODShiLtJ_G0027789.1 mouse_genomes_project 3 168831537 168836475 + MGP_NODShiLtJ_P0063903 Gng5 protein_coding protein_coding MGP_NODShiLtJ_T0063904.1 MGP_NODShiLtJ_G0027789.1 mouse_genomes_project 3 168831756 168839594 + MGP_NODShiLtJ_P0063904 Gng5 protein_coding protein_coding MGP_NODShiLtJ_T0007649.1 MGP_NODShiLtJ_G0006251.1 mouse_genomes_project 3 154621689 154653868 + Gm43192 lincRNA lincRNA MGP_NODShiLtJ_T0062972.1 MGP_NODShiLtJ_G0027610.1 mouse_genomes_project 3 124799414 124842754 + MGP_NODShiLtJ_P0062972 Slc25a24 protein_coding protein_coding MGP_NODShiLtJ_T0062973.1 MGP_NODShiLtJ_G0027610.1 mouse_genomes_project 3 124799427 124832833 + MGP_NODShiLtJ_P0062973 Slc25a24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010463.1 MGP_NODShiLtJ_G0008596.1 mouse_genomes_project 3 168715468 168715542 - Gm22901 miRNA miRNA MGP_NODShiLtJ_T0060891.1 MGP_NODShiLtJ_G0027122.1 mouse_genomes_project 3 86301674 86418063 + MGP_NODShiLtJ_P0060891 Serpini1 protein_coding protein_coding MGP_NODShiLtJ_T0060892.1 MGP_NODShiLtJ_G0027122.1 mouse_genomes_project 3 86301674 86390160 + MGP_NODShiLtJ_P0060892 Serpini1 protein_coding protein_coding MGP_NODShiLtJ_T0060893.1 MGP_NODShiLtJ_G0027122.1 mouse_genomes_project 3 86301688 86377276 + Serpini1 protein_coding processed_transcript MGP_NODShiLtJ_T0060894.1 MGP_NODShiLtJ_G0027122.1 mouse_genomes_project 3 86301705 86389652 + Serpini1 protein_coding retained_intron MGP_NODShiLtJ_T0061046.1 MGP_NODShiLtJ_G0027157.1 mouse_genomes_project 3 96791270 96829030 - MGP_NODShiLtJ_P0061046 Fhdc1 protein_coding protein_coding MGP_NODShiLtJ_T0061047.1 MGP_NODShiLtJ_G0027157.1 mouse_genomes_project 3 96793107 96828095 - MGP_NODShiLtJ_P0061047 Fhdc1 protein_coding protein_coding MGP_NODShiLtJ_T0061048.1 MGP_NODShiLtJ_G0027157.1 mouse_genomes_project 3 96793180 96828994 - MGP_NODShiLtJ_P0061048 Fhdc1 protein_coding protein_coding MGP_NODShiLtJ_T0061049.1 MGP_NODShiLtJ_G0027157.1 mouse_genomes_project 3 96797884 96802738 - Fhdc1 protein_coding retained_intron MGP_NODShiLtJ_T0061050.1 MGP_NODShiLtJ_G0027157.1 mouse_genomes_project 3 96823110 96827586 - Fhdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0061785.1 MGP_NODShiLtJ_G0027296.1 mouse_genomes_project 3 103892322 103895390 - MGP_NODShiLtJ_P0061785 S100a9 protein_coding protein_coding MGP_NODShiLtJ_T0061786.1 MGP_NODShiLtJ_G0027296.1 mouse_genomes_project 3 103892322 103895400 - MGP_NODShiLtJ_P0061786 S100a9 protein_coding protein_coding MGP_NODShiLtJ_T0014053.1 MGP_NODShiLtJ_G0012161.1 mouse_genomes_project 3 106833750 106834441 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063519.1 MGP_NODShiLtJ_G0027710.1 mouse_genomes_project 3 153372754 153397414 + MGP_NODShiLtJ_P0063519 Ints12 protein_coding protein_coding MGP_NODShiLtJ_T0063520.1 MGP_NODShiLtJ_G0027710.1 mouse_genomes_project 3 153372852 153387246 + Ints12 protein_coding retained_intron MGP_NODShiLtJ_T0063521.1 MGP_NODShiLtJ_G0027710.1 mouse_genomes_project 3 153385538 153393511 + Ints12 protein_coding processed_transcript MGP_NODShiLtJ_T0062237.1 MGP_NODShiLtJ_G0027425.1 mouse_genomes_project 3 110333430 110347747 + MGP_NODShiLtJ_P0062237 Sv2a protein_coding protein_coding MGP_NODShiLtJ_T0062238.1 MGP_NODShiLtJ_G0027425.1 mouse_genomes_project 3 110338903 110340665 + Sv2a protein_coding retained_intron MGP_NODShiLtJ_T0062239.1 MGP_NODShiLtJ_G0027425.1 mouse_genomes_project 3 110344772 110347744 + Sv2a protein_coding processed_transcript MGP_NODShiLtJ_T0099218.1 MGP_NODShiLtJ_G0037612.1 mouse_genomes_project 3 138870937 138871043 - Gm23733 snRNA snRNA MGP_NODShiLtJ_T0007703.1 MGP_NODShiLtJ_G0006296.1 mouse_genomes_project 3 171970647 172014978 + Gm42649 lincRNA lincRNA MGP_NODShiLtJ_T0100449.1 MGP_NODShiLtJ_G0038843.1 mouse_genomes_project 3 57084649 57084784 - Gm24503 snoRNA snoRNA MGP_NODShiLtJ_T0099226.1 MGP_NODShiLtJ_G0037620.1 mouse_genomes_project 3 157941216 157941323 + Gm26107 snRNA snRNA MGP_NODShiLtJ_T0062187.1 MGP_NODShiLtJ_G0027415.1 mouse_genomes_project 3 110001845 110005623 - MGP_NODShiLtJ_P0062187 Ciart protein_coding protein_coding MGP_NODShiLtJ_T0062188.1 MGP_NODShiLtJ_G0027415.1 mouse_genomes_project 3 110001853 110005557 - MGP_NODShiLtJ_P0062188 Ciart protein_coding protein_coding MGP_NODShiLtJ_T0062189.1 MGP_NODShiLtJ_G0027415.1 mouse_genomes_project 3 110001855 110005583 - MGP_NODShiLtJ_P0062189 Ciart protein_coding protein_coding MGP_NODShiLtJ_T0062190.1 MGP_NODShiLtJ_G0027415.1 mouse_genomes_project 3 110002155 110005603 - MGP_NODShiLtJ_P0062190 Ciart protein_coding protein_coding MGP_NODShiLtJ_T0062191.1 MGP_NODShiLtJ_G0027415.1 mouse_genomes_project 3 110002861 110004599 - MGP_NODShiLtJ_P0062191 Ciart protein_coding protein_coding MGP_NODShiLtJ_T0062192.1 MGP_NODShiLtJ_G0027415.1 mouse_genomes_project 3 110004025 110005426 - MGP_NODShiLtJ_P0062192 Ciart protein_coding protein_coding MGP_NODShiLtJ_T0060789.1 MGP_NODShiLtJ_G0027094.1 mouse_genomes_project 3 75829920 75862255 + MGP_NODShiLtJ_P0060789 Mlf1 protein_coding protein_coding MGP_NODShiLtJ_T0060790.1 MGP_NODShiLtJ_G0027094.1 mouse_genomes_project 3 75829948 75837642 + Mlf1 protein_coding processed_transcript MGP_NODShiLtJ_T0060791.1 MGP_NODShiLtJ_G0027094.1 mouse_genomes_project 3 75829965 75855596 + MGP_NODShiLtJ_P0060791 Mlf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060792.1 MGP_NODShiLtJ_G0027094.1 mouse_genomes_project 3 75829971 75862260 + MGP_NODShiLtJ_P0060792 Mlf1 protein_coding protein_coding MGP_NODShiLtJ_T0001135.1 MGP_NODShiLtJ_G0001058.1 mouse_genomes_project 3 41479539 41480720 - TEC TEC MGP_NODShiLtJ_T0098490.1 MGP_NODShiLtJ_G0036885.1 mouse_genomes_project 3 105591128 105631549 - 4930511M18Rik sense_overlapping sense_overlapping MGP_NODShiLtJ_T0007419.1 MGP_NODShiLtJ_G0006073.1 mouse_genomes_project 3 23294242 23306080 - Gm38324 lincRNA lincRNA MGP_NODShiLtJ_T0060923.1 MGP_NODShiLtJ_G0027128.1 mouse_genomes_project 3 91292510 91305606 + Ppid protein_coding retained_intron MGP_NODShiLtJ_T0060924.1 MGP_NODShiLtJ_G0027128.1 mouse_genomes_project 3 91292533 91305980 + MGP_NODShiLtJ_P0060924 Ppid protein_coding protein_coding MGP_NODShiLtJ_T0060925.1 MGP_NODShiLtJ_G0027128.1 mouse_genomes_project 3 91292656 91296476 + Ppid protein_coding processed_transcript MGP_NODShiLtJ_T0060926.1 MGP_NODShiLtJ_G0027128.1 mouse_genomes_project 3 91294857 91298929 + MGP_NODShiLtJ_P0060926 Ppid protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060927.1 MGP_NODShiLtJ_G0027128.1 mouse_genomes_project 3 91297324 91299356 + Ppid protein_coding retained_intron MGP_NODShiLtJ_T0060928.1 MGP_NODShiLtJ_G0027128.1 mouse_genomes_project 3 91299876 91304658 + Ppid protein_coding retained_intron MGP_NODShiLtJ_T0099158.1 MGP_NODShiLtJ_G0037552.1 mouse_genomes_project 3 35519492 35519649 + Gm23214 snRNA snRNA MGP_NODShiLtJ_T0004162.1 MGP_NODShiLtJ_G0003660.1 mouse_genomes_project 3 35081398 35084037 + Gm37640 antisense antisense MGP_NODShiLtJ_T0014056.1 MGP_NODShiLtJ_G0012164.1 mouse_genomes_project 3 107013904 107014359 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060013.1 MGP_NODShiLtJ_G0026942.1 mouse_genomes_project 3 33205502 33229887 + Gpr160 protein_coding retained_intron MGP_NODShiLtJ_T0060014.1 MGP_NODShiLtJ_G0026942.1 mouse_genomes_project 3 33205502 33250513 + MGP_NODShiLtJ_P0060014 Gpr160 protein_coding protein_coding MGP_NODShiLtJ_T0060015.1 MGP_NODShiLtJ_G0026942.1 mouse_genomes_project 3 33205502 33250513 + MGP_NODShiLtJ_P0060015 Gpr160 protein_coding protein_coding MGP_NODShiLtJ_T0060016.1 MGP_NODShiLtJ_G0026942.1 mouse_genomes_project 3 33205502 33250515 + MGP_NODShiLtJ_P0060016 Gpr160 protein_coding protein_coding MGP_NODShiLtJ_T0060017.1 MGP_NODShiLtJ_G0026942.1 mouse_genomes_project 3 33205541 33250513 + MGP_NODShiLtJ_P0060017 Gpr160 protein_coding protein_coding MGP_NODShiLtJ_T0060018.1 MGP_NODShiLtJ_G0026942.1 mouse_genomes_project 3 33205545 33249115 + MGP_NODShiLtJ_P0060018 Gpr160 protein_coding protein_coding MGP_NODShiLtJ_T0060019.1 MGP_NODShiLtJ_G0026942.1 mouse_genomes_project 3 33205567 33250513 + MGP_NODShiLtJ_P0060019 Gpr160 protein_coding protein_coding MGP_NODShiLtJ_T0060020.1 MGP_NODShiLtJ_G0026942.1 mouse_genomes_project 3 33205695 33249144 + MGP_NODShiLtJ_P0060020 Gpr160 protein_coding protein_coding MGP_NODShiLtJ_T0004232.1 MGP_NODShiLtJ_G0003712.1 mouse_genomes_project 3 108256398 108265475 - Gm43306 antisense antisense MGP_NODShiLtJ_T0013798.1 MGP_NODShiLtJ_G0011906.1 mouse_genomes_project 3 9505874 9506385 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004254.1 MGP_NODShiLtJ_G0003726.1 mouse_genomes_project 3 111263565 111265615 - 9230114J08Rik antisense antisense MGP_NODShiLtJ_T0061815.1 MGP_NODShiLtJ_G0027320.1 mouse_genomes_project 3 106080354 106082345 - MGP_NODShiLtJ_P0061815 2310046K23Rik protein_coding protein_coding MGP_NODShiLtJ_T0061868.1 MGP_NODShiLtJ_G0027361.1 mouse_genomes_project 3 107756820 107759056 - MGP_NODShiLtJ_P0061868 protein_coding protein_coding MGP_NODShiLtJ_T0062471.1 MGP_NODShiLtJ_G0027497.1 mouse_genomes_project 3 116930668 116993485 + MGP_NODShiLtJ_P0062471 Casq2 protein_coding protein_coding MGP_NODShiLtJ_T0062472.1 MGP_NODShiLtJ_G0027497.1 mouse_genomes_project 3 116930799 116993485 + MGP_NODShiLtJ_P0062472 Casq2 protein_coding protein_coding MGP_NODShiLtJ_T0062473.1 MGP_NODShiLtJ_G0027497.1 mouse_genomes_project 3 116930892 116992302 + MGP_NODShiLtJ_P0062473 Casq2 protein_coding protein_coding MGP_NODShiLtJ_T0062474.1 MGP_NODShiLtJ_G0027497.1 mouse_genomes_project 3 116971638 116992319 + Casq2 protein_coding processed_transcript MGP_NODShiLtJ_T0062475.1 MGP_NODShiLtJ_G0027497.1 mouse_genomes_project 3 116991021 116992556 + Casq2 protein_coding retained_intron MGP_NODShiLtJ_T0100505.1 MGP_NODShiLtJ_G0038899.1 mouse_genomes_project 3 177368021 177368092 - Snord45b snoRNA snoRNA MGP_NODShiLtJ_T0013883.1 MGP_NODShiLtJ_G0011991.1 mouse_genomes_project 3 41500537 41501370 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061504.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102258451 102260729 - Slc50a1 protein_coding retained_intron MGP_NODShiLtJ_T0061505.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102258451 102260732 - Slc50a1 protein_coding retained_intron MGP_NODShiLtJ_T0061506.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102258451 102260701 - MGP_NODShiLtJ_P0061506 Slc50a1 protein_coding protein_coding MGP_NODShiLtJ_T0061507.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102258451 102260776 - MGP_NODShiLtJ_P0061507 Slc50a1 protein_coding protein_coding MGP_NODShiLtJ_T0061508.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102258451 102260685 - MGP_NODShiLtJ_P0061508 Slc50a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061509.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102258453 102260731 - Slc50a1 protein_coding retained_intron MGP_NODShiLtJ_T0061510.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102258453 102260775 - Slc50a1 protein_coding retained_intron MGP_NODShiLtJ_T0061511.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102259276 102260776 - MGP_NODShiLtJ_P0061511 Slc50a1 protein_coding protein_coding MGP_NODShiLtJ_T0061512.1 MGP_NODShiLtJ_G0027243.1 mouse_genomes_project 3 102259350 102260433 - Slc50a1 protein_coding processed_transcript MGP_NODShiLtJ_T0007577.1 MGP_NODShiLtJ_G0006194.1 mouse_genomes_project 3 116497194 116505978 + Gm43135 lincRNA lincRNA MGP_NODShiLtJ_T0007504.1 MGP_NODShiLtJ_G0006139.1 mouse_genomes_project 3 77309148 77311863 - lincRNA lincRNA MGP_NODShiLtJ_T0062792.1 MGP_NODShiLtJ_G0027571.1 mouse_genomes_project 3 123184408 123199100 - MGP_NODShiLtJ_P0062792 Ahcyl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062793.1 MGP_NODShiLtJ_G0027571.1 mouse_genomes_project 3 123184410 123218599 - MGP_NODShiLtJ_P0062793 Ahcyl1 protein_coding protein_coding MGP_NODShiLtJ_T0062794.1 MGP_NODShiLtJ_G0027571.1 mouse_genomes_project 3 123185243 123186887 - Ahcyl1 protein_coding processed_transcript MGP_NODShiLtJ_T0062795.1 MGP_NODShiLtJ_G0027571.1 mouse_genomes_project 3 123185773 123191865 - Ahcyl1 protein_coding retained_intron MGP_NODShiLtJ_T0062796.1 MGP_NODShiLtJ_G0027571.1 mouse_genomes_project 3 123186682 123188774 - Ahcyl1 protein_coding retained_intron MGP_NODShiLtJ_T0062797.1 MGP_NODShiLtJ_G0027571.1 mouse_genomes_project 3 123189540 123190800 - Ahcyl1 protein_coding retained_intron MGP_NODShiLtJ_T0062798.1 MGP_NODShiLtJ_G0027571.1 mouse_genomes_project 3 123192438 123218002 - MGP_NODShiLtJ_P0062798 Ahcyl1 protein_coding protein_coding MGP_NODShiLtJ_T0062799.1 MGP_NODShiLtJ_G0027571.1 mouse_genomes_project 3 123193026 123218544 - Ahcyl1 protein_coding retained_intron MGP_NODShiLtJ_T0004265.1 MGP_NODShiLtJ_G0003734.1 mouse_genomes_project 3 118807587 118809992 + Gm15886 antisense antisense MGP_NODShiLtJ_T0004266.1 MGP_NODShiLtJ_G0003734.1 mouse_genomes_project 3 118807608 118825458 + Gm15886 antisense antisense MGP_NODShiLtJ_T0004267.1 MGP_NODShiLtJ_G0003734.1 mouse_genomes_project 3 118807943 118813552 + Gm15886 antisense antisense MGP_NODShiLtJ_T0004268.1 MGP_NODShiLtJ_G0003734.1 mouse_genomes_project 3 118812970 118813963 + Gm15886 antisense antisense MGP_NODShiLtJ_T0063883.1 MGP_NODShiLtJ_G0027785.1 mouse_genomes_project 3 168509331 168580591 + MGP_NODShiLtJ_P0063883 Lpar3 protein_coding protein_coding MGP_NODShiLtJ_T0001120.1 MGP_NODShiLtJ_G0001043.1 mouse_genomes_project 3 37311785 37312416 - TEC TEC MGP_NODShiLtJ_T0063635.1 MGP_NODShiLtJ_G0027729.1 mouse_genomes_project 3 158490701 158493279 - protein_coding lincRNA MGP_NODShiLtJ_T0060432.1 MGP_NODShiLtJ_G0027011.1 mouse_genomes_project 3 57816944 57865297 - MGP_NODShiLtJ_P0060432 Setd7 protein_coding protein_coding MGP_NODShiLtJ_T0060433.1 MGP_NODShiLtJ_G0027011.1 mouse_genomes_project 3 57831600 57839173 - Setd7 protein_coding retained_intron MGP_NODShiLtJ_T0060434.1 MGP_NODShiLtJ_G0027011.1 mouse_genomes_project 3 57838026 57839654 - Setd7 protein_coding retained_intron MGP_NODShiLtJ_T0060435.1 MGP_NODShiLtJ_G0027011.1 mouse_genomes_project 3 57851966 57854604 - Setd7 protein_coding retained_intron MGP_NODShiLtJ_T0061501.1 MGP_NODShiLtJ_G0027242.1 mouse_genomes_project 3 102249726 102257283 + MGP_NODShiLtJ_P0061501 Dpm3 protein_coding protein_coding MGP_NODShiLtJ_T0061502.1 MGP_NODShiLtJ_G0027242.1 mouse_genomes_project 3 102256757 102257283 + MGP_NODShiLtJ_P0061502 Dpm3 protein_coding protein_coding MGP_NODShiLtJ_T0061503.1 MGP_NODShiLtJ_G0027242.1 mouse_genomes_project 3 102256844 102257285 + Dpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061214.1 MGP_NODShiLtJ_G0027197.1 mouse_genomes_project 3 100806664 100820134 - MGP_NODShiLtJ_P0061214 Ttc24 protein_coding protein_coding MGP_NODShiLtJ_T0061215.1 MGP_NODShiLtJ_G0027197.1 mouse_genomes_project 3 100807067 100809327 - MGP_NODShiLtJ_P0061215 Ttc24 protein_coding protein_coding MGP_NODShiLtJ_T0001156.1 MGP_NODShiLtJ_G0001079.1 mouse_genomes_project 3 57507076 57510443 + TEC TEC MGP_NODShiLtJ_T0060908.1 MGP_NODShiLtJ_G0027125.1 mouse_genomes_project 3 90718605 90808692 - MGP_NODShiLtJ_P0060908 Rapgef2 protein_coding protein_coding MGP_NODShiLtJ_T0060909.1 MGP_NODShiLtJ_G0027125.1 mouse_genomes_project 3 90718617 90809592 - MGP_NODShiLtJ_P0060909 Rapgef2 protein_coding protein_coding MGP_NODShiLtJ_T0060910.1 MGP_NODShiLtJ_G0027125.1 mouse_genomes_project 3 90718620 90963606 - MGP_NODShiLtJ_P0060910 Rapgef2 protein_coding protein_coding MGP_NODShiLtJ_T0060911.1 MGP_NODShiLtJ_G0027125.1 mouse_genomes_project 3 90768670 90840189 - Rapgef2 protein_coding retained_intron MGP_NODShiLtJ_T0060912.1 MGP_NODShiLtJ_G0027125.1 mouse_genomes_project 3 90773612 90840291 - Rapgef2 protein_coding processed_transcript MGP_NODShiLtJ_T0060913.1 MGP_NODShiLtJ_G0027125.1 mouse_genomes_project 3 90835389 90849860 - Rapgef2 protein_coding retained_intron MGP_NODShiLtJ_T0063764.1 MGP_NODShiLtJ_G0027759.1 mouse_genomes_project 3 164452242 164471064 + MGP_NODShiLtJ_P0063764 Gbp2 protein_coding protein_coding MGP_NODShiLtJ_T0063765.1 MGP_NODShiLtJ_G0027759.1 mouse_genomes_project 3 164452275 164463624 + MGP_NODShiLtJ_P0063765 Gbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063766.1 MGP_NODShiLtJ_G0027759.1 mouse_genomes_project 3 164455293 164471067 + MGP_NODShiLtJ_P0063766 Gbp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0014204.1 MGP_NODShiLtJ_G0012312.1 mouse_genomes_project 3 156166724 156167053 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061849.1 MGP_NODShiLtJ_G0027349.1 mouse_genomes_project 3 106743167 106746180 + MGP_NODShiLtJ_P0061849 protein_coding protein_coding MGP_NODShiLtJ_T0061001.1 MGP_NODShiLtJ_G0027147.1 mouse_genomes_project 3 95265090 95271275 + MGP_NODShiLtJ_P0061001 Fga protein_coding protein_coding MGP_NODShiLtJ_T0061002.1 MGP_NODShiLtJ_G0027147.1 mouse_genomes_project 3 95265229 95272639 + MGP_NODShiLtJ_P0061002 Fga protein_coding protein_coding MGP_NODShiLtJ_T0061160.1 MGP_NODShiLtJ_G0027183.1 mouse_genomes_project 3 100477250 100495030 - MGP_NODShiLtJ_P0061160 Ntrk1 protein_coding protein_coding MGP_NODShiLtJ_T0099180.1 MGP_NODShiLtJ_G0037574.1 mouse_genomes_project 3 74367676 74367829 - Gm26442 snRNA snRNA MGP_NODShiLtJ_T0061848.1 MGP_NODShiLtJ_G0027348.1 mouse_genomes_project 3 106734768 106746784 + MGP_NODShiLtJ_P0061848 protein_coding protein_coding MGP_NODShiLtJ_T0063820.1 MGP_NODShiLtJ_G0027772.1 mouse_genomes_project 3 167140761 167173319 - MGP_NODShiLtJ_P0063820 Clca1 protein_coding protein_coding MGP_NODShiLtJ_T0063821.1 MGP_NODShiLtJ_G0027772.1 mouse_genomes_project 3 167141501 167146118 - Clca1 protein_coding processed_transcript MGP_NODShiLtJ_T0063822.1 MGP_NODShiLtJ_G0027772.1 mouse_genomes_project 3 167150905 167156860 - Clca1 protein_coding processed_transcript MGP_NODShiLtJ_T0063878.1 MGP_NODShiLtJ_G0027784.1 mouse_genomes_project 3 168429046 168480714 + MGP_NODShiLtJ_P0063878 Mcoln2 protein_coding protein_coding MGP_NODShiLtJ_T0063879.1 MGP_NODShiLtJ_G0027784.1 mouse_genomes_project 3 168429192 168456435 + Mcoln2 protein_coding retained_intron MGP_NODShiLtJ_T0063880.1 MGP_NODShiLtJ_G0027784.1 mouse_genomes_project 3 168429387 168480713 + MGP_NODShiLtJ_P0063880 Mcoln2 protein_coding protein_coding MGP_NODShiLtJ_T0063881.1 MGP_NODShiLtJ_G0027784.1 mouse_genomes_project 3 168474355 168477687 + MGP_NODShiLtJ_P0063881 Mcoln2 protein_coding protein_coding MGP_NODShiLtJ_T0063882.1 MGP_NODShiLtJ_G0027784.1 mouse_genomes_project 3 168477283 168480341 + Mcoln2 protein_coding retained_intron MGP_NODShiLtJ_T0013858.1 MGP_NODShiLtJ_G0011966.1 mouse_genomes_project 3 35707856 35708088 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014044.1 MGP_NODShiLtJ_G0012152.1 mouse_genomes_project 3 103969947 103970821 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001347.1 MGP_NODShiLtJ_G0001267.1 mouse_genomes_project 3 175473355 175474470 + TEC TEC MGP_NODShiLtJ_T0013894.1 MGP_NODShiLtJ_G0012002.1 mouse_genomes_project 3 47014801 47015972 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004224.1 MGP_NODShiLtJ_G0003706.1 mouse_genomes_project 3 102307070 102311715 + Gm15998 antisense antisense MGP_NODShiLtJ_T0001134.1 MGP_NODShiLtJ_G0001057.1 mouse_genomes_project 3 41011530 41012086 + TEC TEC MGP_NODShiLtJ_T0101887.1 MGP_NODShiLtJ_G0040055.1 mouse_genomes_project 3 108155833 108156019 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0060999.1 MGP_NODShiLtJ_G0027146.1 mouse_genomes_project 3 95245762 95254073 + MGP_NODShiLtJ_P0060999 Fgg protein_coding protein_coding MGP_NODShiLtJ_T0061000.1 MGP_NODShiLtJ_G0027146.1 mouse_genomes_project 3 95245899 95252741 + MGP_NODShiLtJ_P0061000 Fgg protein_coding protein_coding MGP_NODShiLtJ_T0100450.1 MGP_NODShiLtJ_G0038844.1 mouse_genomes_project 3 59957292 59957411 + Gm23675 snoRNA snoRNA MGP_NODShiLtJ_T0099154.1 MGP_NODShiLtJ_G0037548.1 mouse_genomes_project 3 18268620 18268747 - Gm23441 snRNA snRNA MGP_NODShiLtJ_T0063201.1 MGP_NODShiLtJ_G0027653.1 mouse_genomes_project 3 140984644 140996072 + MGP_NODShiLtJ_P0063201 Dnttip2 protein_coding protein_coding MGP_NODShiLtJ_T0063202.1 MGP_NODShiLtJ_G0027653.1 mouse_genomes_project 3 140984674 140986467 + Dnttip2 protein_coding processed_transcript MGP_NODShiLtJ_T0063203.1 MGP_NODShiLtJ_G0027653.1 mouse_genomes_project 3 140986273 140996050 + Dnttip2 protein_coding processed_transcript MGP_NODShiLtJ_T0063204.1 MGP_NODShiLtJ_G0027653.1 mouse_genomes_project 3 140987029 140989870 + Dnttip2 protein_coding retained_intron MGP_NODShiLtJ_T0063205.1 MGP_NODShiLtJ_G0027653.1 mouse_genomes_project 3 140990834 140995899 + Dnttip2 protein_coding retained_intron MGP_NODShiLtJ_T0010405.1 MGP_NODShiLtJ_G0008538.1 mouse_genomes_project 3 37286593 37286672 + Mir1897 miRNA miRNA MGP_NODShiLtJ_T0062869.1 MGP_NODShiLtJ_G0027588.1 mouse_genomes_project 3 123786629 123801802 - MGP_NODShiLtJ_P0062869 Sypl2 protein_coding protein_coding MGP_NODShiLtJ_T0062870.1 MGP_NODShiLtJ_G0027588.1 mouse_genomes_project 3 123792458 123801797 - Sypl2 protein_coding retained_intron MGP_NODShiLtJ_T0061098.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99387505 99530932 - MGP_NODShiLtJ_P0061098 Dclk2 protein_coding protein_coding MGP_NODShiLtJ_T0061099.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99387507 99530741 - MGP_NODShiLtJ_P0061099 Dclk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061100.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99387507 99531405 - MGP_NODShiLtJ_P0061100 Dclk2 protein_coding protein_coding MGP_NODShiLtJ_T0061101.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99387513 99530888 - MGP_NODShiLtJ_P0061101 Dclk2 protein_coding protein_coding MGP_NODShiLtJ_T0061102.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99388566 99530723 - MGP_NODShiLtJ_P0061102 Dclk2 protein_coding protein_coding MGP_NODShiLtJ_T0061103.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99388595 99393670 - Dclk2 protein_coding processed_transcript MGP_NODShiLtJ_T0061104.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99388703 99400515 - Dclk2 protein_coding processed_transcript MGP_NODShiLtJ_T0061105.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99390700 99399367 - Dclk2 protein_coding processed_transcript MGP_NODShiLtJ_T0061106.1 MGP_NODShiLtJ_G0027171.1 mouse_genomes_project 3 99400275 99530927 - MGP_NODShiLtJ_P0061106 Dclk2 protein_coding protein_coding MGP_NODShiLtJ_T0061820.1 MGP_NODShiLtJ_G0027324.1 mouse_genomes_project 3 106197328 106200093 - MGP_NODShiLtJ_P0061820 2210017I01Rik protein_coding protein_coding MGP_NODShiLtJ_T0013964.1 MGP_NODShiLtJ_G0012072.1 mouse_genomes_project 3 73619547 73621361 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099210.1 MGP_NODShiLtJ_G0037604.1 mouse_genomes_project 3 118458246 118458350 - Gm25199 snRNA snRNA MGP_NODShiLtJ_T0060788.1 MGP_NODShiLtJ_G0027093.1 mouse_genomes_project 3 75819956 75832203 - MGP_NODShiLtJ_P0060788 protein_coding protein_coding MGP_NODShiLtJ_T0001109.1 MGP_NODShiLtJ_G0001032.1 mouse_genomes_project 3 34391918 34394754 + TEC TEC MGP_NODShiLtJ_T0001197.1 MGP_NODShiLtJ_G0001118.1 mouse_genomes_project 3 65587685 65588880 + TEC TEC MGP_NODShiLtJ_T0062087.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109316702 109324672 + MGP_NODShiLtJ_P0062087 Cers2 protein_coding protein_coding MGP_NODShiLtJ_T0062088.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109316995 109326391 + MGP_NODShiLtJ_P0062088 Cers2 protein_coding protein_coding MGP_NODShiLtJ_T0062089.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109317158 109323565 + Cers2 protein_coding retained_intron MGP_NODShiLtJ_T0062090.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109317178 109324115 + Cers2 protein_coding retained_intron MGP_NODShiLtJ_T0062091.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109320145 109323342 + Cers2 protein_coding retained_intron MGP_NODShiLtJ_T0062092.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109320816 109323834 + MGP_NODShiLtJ_P0062092 Cers2 protein_coding protein_coding MGP_NODShiLtJ_T0062093.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109321582 109324747 + MGP_NODShiLtJ_P0062093 Cers2 protein_coding protein_coding MGP_NODShiLtJ_T0062094.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109322924 109325464 + Cers2 protein_coding retained_intron MGP_NODShiLtJ_T0062095.1 MGP_NODShiLtJ_G0027400.1 mouse_genomes_project 3 109323731 109324749 + Cers2 protein_coding retained_intron MGP_NODShiLtJ_T0060970.1 MGP_NODShiLtJ_G0027138.1 mouse_genomes_project 3 94077152 94098385 - MGP_NODShiLtJ_P0060970 Tdo2 protein_coding protein_coding MGP_NODShiLtJ_T0060971.1 MGP_NODShiLtJ_G0027138.1 mouse_genomes_project 3 94077158 94098894 - MGP_NODShiLtJ_P0060971 Tdo2 protein_coding protein_coding MGP_NODShiLtJ_T0060972.1 MGP_NODShiLtJ_G0027138.1 mouse_genomes_project 3 94078792 94084789 - Tdo2 protein_coding processed_transcript MGP_NODShiLtJ_T0060973.1 MGP_NODShiLtJ_G0027138.1 mouse_genomes_project 3 94081101 94084741 - Tdo2 protein_coding retained_intron MGP_NODShiLtJ_T0014103.1 MGP_NODShiLtJ_G0012211.1 mouse_genomes_project 3 118728722 118729122 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063868.1 MGP_NODShiLtJ_G0027781.1 mouse_genomes_project 3 168259155 168296990 + MGP_NODShiLtJ_P0063868 Syde2 protein_coding protein_coding MGP_NODShiLtJ_T0063869.1 MGP_NODShiLtJ_G0027781.1 mouse_genomes_project 3 168259938 168296990 + MGP_NODShiLtJ_P0063869 Syde2 protein_coding protein_coding MGP_NODShiLtJ_T0063870.1 MGP_NODShiLtJ_G0027781.1 mouse_genomes_project 3 168260088 168296997 + MGP_NODShiLtJ_P0063870 Syde2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0063871.1 MGP_NODShiLtJ_G0027781.1 mouse_genomes_project 3 168265624 168271344 + Syde2 protein_coding processed_transcript MGP_NODShiLtJ_T0063666.1 MGP_NODShiLtJ_G0027737.1 mouse_genomes_project 3 159035734 159052166 + MGP_NODShiLtJ_P0063666 1110002E22Rik protein_coding protein_coding MGP_NODShiLtJ_T0063667.1 MGP_NODShiLtJ_G0027737.1 mouse_genomes_project 3 159042284 159048033 + 1110002E22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0004318.1 MGP_NODShiLtJ_G0003766.1 mouse_genomes_project 3 149719835 149724664 + Gm42650 antisense antisense MGP_NODShiLtJ_T0061803.1 MGP_NODShiLtJ_G0027309.1 mouse_genomes_project 3 105871697 105873005 + MGP_NODShiLtJ_P0061803 Sprr2e protein_coding protein_coding MGP_NODShiLtJ_T0013881.1 MGP_NODShiLtJ_G0011989.1 mouse_genomes_project 3 40988498 40988974 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100495.1 MGP_NODShiLtJ_G0038889.1 mouse_genomes_project 3 150947483 150947611 - Gm26090 snoRNA snoRNA MGP_NODShiLtJ_T0001191.1 MGP_NODShiLtJ_G0001112.1 mouse_genomes_project 3 62761086 62763063 - TEC TEC MGP_NODShiLtJ_T0001112.1 MGP_NODShiLtJ_G0001035.1 mouse_genomes_project 3 35204627 35204940 - TEC TEC MGP_NODShiLtJ_T0007623.1 MGP_NODShiLtJ_G0006229.1 mouse_genomes_project 3 141006127 141017419 + Gm40190 lincRNA lincRNA MGP_NODShiLtJ_T0013918.1 MGP_NODShiLtJ_G0012026.1 mouse_genomes_project 3 56516251 56516840 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059790.1 MGP_NODShiLtJ_G0026891.1 mouse_genomes_project 3 14534692 14561522 + MGP_NODShiLtJ_P0059790 Car13 protein_coding protein_coding MGP_NODShiLtJ_T0013948.1 MGP_NODShiLtJ_G0012056.1 mouse_genomes_project 3 66926506 66926648 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010399.1 MGP_NODShiLtJ_G0008532.1 mouse_genomes_project 3 29558899 29558995 - Mir3092 miRNA miRNA MGP_NODShiLtJ_T0014141.1 MGP_NODShiLtJ_G0012249.1 mouse_genomes_project 3 131963936 131964288 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001322.1 MGP_NODShiLtJ_G0001242.1 mouse_genomes_project 3 151242281 151244534 + TEC TEC MGP_NODShiLtJ_T0004264.1 MGP_NODShiLtJ_G0003733.1 mouse_genomes_project 3 117614085 117630369 - Tspan2os antisense antisense MGP_NODShiLtJ_T0013917.1 MGP_NODShiLtJ_G0012025.1 mouse_genomes_project 3 56415728 56415960 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063652.1 MGP_NODShiLtJ_G0027734.1 mouse_genomes_project 3 158876218 158886406 + MGP_NODShiLtJ_P0063652 protein_coding protein_coding MGP_NODShiLtJ_T0013977.1 MGP_NODShiLtJ_G0012085.1 mouse_genomes_project 3 76243226 76244557 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014035.1 MGP_NODShiLtJ_G0012143.1 mouse_genomes_project 3 99696706 99697015 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001323.1 MGP_NODShiLtJ_G0001243.1 mouse_genomes_project 3 151653964 151657304 - TEC TEC MGP_NODShiLtJ_T0063405.1 MGP_NODShiLtJ_G0027687.1 mouse_genomes_project 3 149773827 149790109 - MGP_NODShiLtJ_P0063405 Lrit3 protein_coding protein_coding MGP_NODShiLtJ_T0063406.1 MGP_NODShiLtJ_G0027687.1 mouse_genomes_project 3 149774237 149790109 - MGP_NODShiLtJ_P0063406 Lrit3 protein_coding protein_coding MGP_NODShiLtJ_T0063407.1 MGP_NODShiLtJ_G0027687.1 mouse_genomes_project 3 149776594 149786600 - Lrit3 protein_coding retained_intron MGP_NODShiLtJ_T0061056.1 MGP_NODShiLtJ_G0027161.1 mouse_genomes_project 3 97025379 97069674 + MGP_NODShiLtJ_P0061056 Tmem154 protein_coding protein_coding MGP_NODShiLtJ_T0061057.1 MGP_NODShiLtJ_G0027161.1 mouse_genomes_project 3 97025397 97045722 + Tmem154 protein_coding retained_intron MGP_NODShiLtJ_T0061058.1 MGP_NODShiLtJ_G0027161.1 mouse_genomes_project 3 97025557 97045612 + Tmem154 protein_coding processed_transcript MGP_NODShiLtJ_T0061059.1 MGP_NODShiLtJ_G0027161.1 mouse_genomes_project 3 97050271 97052529 + Tmem154 protein_coding retained_intron MGP_NODShiLtJ_T0099153.1 MGP_NODShiLtJ_G0037547.1 mouse_genomes_project 3 17007048 17007112 - Gm26485 snRNA snRNA MGP_NODShiLtJ_T0001125.1 MGP_NODShiLtJ_G0001048.1 mouse_genomes_project 3 39372286 39375396 - TEC TEC MGP_NODShiLtJ_T0062853.1 MGP_NODShiLtJ_G0027584.1 mouse_genomes_project 3 123715964 123723795 - MGP_NODShiLtJ_P0062853 Gpr61 protein_coding protein_coding MGP_NODShiLtJ_T0062854.1 MGP_NODShiLtJ_G0027584.1 mouse_genomes_project 3 123716300 123723795 - MGP_NODShiLtJ_P0062854 Gpr61 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001269.1 MGP_NODShiLtJ_G0001190.1 mouse_genomes_project 3 139639011 139639708 - TEC TEC MGP_NODShiLtJ_T0061403.1 MGP_NODShiLtJ_G0027229.1 mouse_genomes_project 3 102046373 102052438 - MGP_NODShiLtJ_P0061403 Rusc1 protein_coding protein_coding MGP_NODShiLtJ_T0061404.1 MGP_NODShiLtJ_G0027229.1 mouse_genomes_project 3 102046373 102055683 - MGP_NODShiLtJ_P0061404 Rusc1 protein_coding protein_coding MGP_NODShiLtJ_T0061405.1 MGP_NODShiLtJ_G0027229.1 mouse_genomes_project 3 102046373 102055704 - MGP_NODShiLtJ_P0061405 Rusc1 protein_coding protein_coding MGP_NODShiLtJ_T0061406.1 MGP_NODShiLtJ_G0027229.1 mouse_genomes_project 3 102049513 102052134 - Rusc1 protein_coding retained_intron MGP_NODShiLtJ_T0061407.1 MGP_NODShiLtJ_G0027229.1 mouse_genomes_project 3 102050613 102052368 - MGP_NODShiLtJ_P0061407 Rusc1 protein_coding protein_coding MGP_NODShiLtJ_T0061408.1 MGP_NODShiLtJ_G0027229.1 mouse_genomes_project 3 102051447 102052148 - Rusc1 protein_coding retained_intron MGP_NODShiLtJ_T0061409.1 MGP_NODShiLtJ_G0027229.1 mouse_genomes_project 3 102051631 102052368 - MGP_NODShiLtJ_P0061409 Rusc1 protein_coding protein_coding MGP_NODShiLtJ_T0098349.1 MGP_NODShiLtJ_G0036754.1 mouse_genomes_project 3 119226545 119230778 - Gm42702 sense_intronic sense_intronic MGP_NODShiLtJ_T0001189.1 MGP_NODShiLtJ_G0001110.1 mouse_genomes_project 3 62218299 62220317 + TEC TEC MGP_NODShiLtJ_T0098364.1 MGP_NODShiLtJ_G0036769.1 mouse_genomes_project 3 120719418 120721358 + Gm43847 sense_intronic sense_intronic MGP_NODShiLtJ_T0001236.1 MGP_NODShiLtJ_G0001157.1 mouse_genomes_project 3 109660666 109662271 + TEC TEC MGP_NODShiLtJ_T0011431.1 MGP_NODShiLtJ_G0009564.1 mouse_genomes_project 3 83113019 83113318 - Gm22538 misc_RNA misc_RNA MGP_NODShiLtJ_T0099176.1 MGP_NODShiLtJ_G0037570.1 mouse_genomes_project 3 71399264 71399370 + Gm24946 snRNA snRNA MGP_NODShiLtJ_T0060814.1 MGP_NODShiLtJ_G0027102.1 mouse_genomes_project 3 77253120 77261024 + MGP_NODShiLtJ_P0060814 Il12a protein_coding protein_coding MGP_NODShiLtJ_T0060815.1 MGP_NODShiLtJ_G0027102.1 mouse_genomes_project 3 77253900 77261020 + MGP_NODShiLtJ_P0060815 Il12a protein_coding protein_coding MGP_NODShiLtJ_T0060816.1 MGP_NODShiLtJ_G0027102.1 mouse_genomes_project 3 77254003 77260568 + Il12a protein_coding retained_intron MGP_NODShiLtJ_T0060817.1 MGP_NODShiLtJ_G0027102.1 mouse_genomes_project 3 77256469 77260500 + Il12a protein_coding retained_intron MGP_NODShiLtJ_T0060818.1 MGP_NODShiLtJ_G0027102.1 mouse_genomes_project 3 77256497 77261022 + Il12a protein_coding retained_intron MGP_NODShiLtJ_T0060819.1 MGP_NODShiLtJ_G0027102.1 mouse_genomes_project 3 77256497 77261024 + Il12a protein_coding retained_intron MGP_NODShiLtJ_T0007696.1 MGP_NODShiLtJ_G0006291.1 mouse_genomes_project 3 169752505 169763639 + Gm36831 lincRNA lincRNA MGP_NODShiLtJ_T0013767.1 MGP_NODShiLtJ_G0011875.1 mouse_genomes_project 3 270319 271070 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004205.1 MGP_NODShiLtJ_G0003692.1 mouse_genomes_project 3 74237005 74241285 + Gm37305 antisense antisense MGP_NODShiLtJ_T0007621.1 MGP_NODShiLtJ_G0006227.1 mouse_genomes_project 3 140362488 140371256 - Gm43608 lincRNA lincRNA MGP_NODShiLtJ_T0099164.1 MGP_NODShiLtJ_G0037558.1 mouse_genomes_project 3 50770080 50770198 + Gm23337 snRNA snRNA MGP_NODShiLtJ_T0061195.1 MGP_NODShiLtJ_G0027192.1 mouse_genomes_project 3 100694924 100697238 + Nes protein_coding retained_intron MGP_NODShiLtJ_T0061196.1 MGP_NODShiLtJ_G0027192.1 mouse_genomes_project 3 100694939 100704303 + MGP_NODShiLtJ_P0061196 Nes protein_coding protein_coding MGP_NODShiLtJ_T0061197.1 MGP_NODShiLtJ_G0027192.1 mouse_genomes_project 3 100694975 100704303 + MGP_NODShiLtJ_P0061197 Nes protein_coding protein_coding MGP_NODShiLtJ_T0013941.1 MGP_NODShiLtJ_G0012049.1 mouse_genomes_project 3 65334161 65334533 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061245.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101089806 101097162 + MGP_NODShiLtJ_P0061245 Glmp protein_coding protein_coding MGP_NODShiLtJ_T0061246.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101089838 101095359 + Glmp protein_coding retained_intron MGP_NODShiLtJ_T0061247.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101089841 101091362 + Glmp protein_coding retained_intron MGP_NODShiLtJ_T0061248.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101089843 101093435 + Glmp protein_coding retained_intron MGP_NODShiLtJ_T0061249.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101089855 101091251 + MGP_NODShiLtJ_P0061249 Glmp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061250.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101089865 101094216 + MGP_NODShiLtJ_P0061250 Glmp protein_coding protein_coding MGP_NODShiLtJ_T0061251.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101089865 101094211 + MGP_NODShiLtJ_P0061251 Glmp protein_coding protein_coding MGP_NODShiLtJ_T0061252.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101089865 101094216 + MGP_NODShiLtJ_P0061252 Glmp protein_coding protein_coding MGP_NODShiLtJ_T0061253.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101090827 101094166 + Glmp protein_coding retained_intron MGP_NODShiLtJ_T0061254.1 MGP_NODShiLtJ_G0027204.1 mouse_genomes_project 3 101093920 101094429 + MGP_NODShiLtJ_P0061254 Glmp protein_coding protein_coding MGP_NODShiLtJ_T0014062.1 MGP_NODShiLtJ_G0012170.1 mouse_genomes_project 3 108484557 108484751 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100504.1 MGP_NODShiLtJ_G0038898.1 mouse_genomes_project 3 177317007 177317132 + Gm24395 snoRNA snoRNA MGP_NODShiLtJ_T0001115.1 MGP_NODShiLtJ_G0001038.1 mouse_genomes_project 3 35909061 35910527 - TEC TEC MGP_NODShiLtJ_T0004163.1 MGP_NODShiLtJ_G0003661.1 mouse_genomes_project 3 35441791 35490827 + Gm37459 antisense antisense MGP_NODShiLtJ_T0004164.1 MGP_NODShiLtJ_G0003661.1 mouse_genomes_project 3 35480570 35487360 + Gm37459 antisense antisense MGP_NODShiLtJ_T0007677.1 MGP_NODShiLtJ_G0006275.1 mouse_genomes_project 3 165502368 165503833 - Gm43616 lincRNA lincRNA MGP_NODShiLtJ_T0007714.1 MGP_NODShiLtJ_G0006302.1 mouse_genomes_project 3 175169672 175177465 + Gm43617 lincRNA lincRNA MGP_NODShiLtJ_T0098489.1 MGP_NODShiLtJ_G0036884.1 mouse_genomes_project 3 73123633 73432942 + sense_overlapping sense_overlapping MGP_NODShiLtJ_T0007705.1 MGP_NODShiLtJ_G0006297.1 mouse_genomes_project 3 172249546 172359320 - Gm31121 lincRNA lincRNA MGP_NODShiLtJ_T0098321.1 MGP_NODShiLtJ_G0036726.1 mouse_genomes_project 3 108470803 108472058 - Gm43768 sense_intronic sense_intronic MGP_NODShiLtJ_T0099208.1 MGP_NODShiLtJ_G0037602.1 mouse_genomes_project 3 111425898 111426008 - Gm24435 snRNA snRNA MGP_NODShiLtJ_T0007588.1 MGP_NODShiLtJ_G0006203.1 mouse_genomes_project 3 119803411 119806208 - Gm29561 lincRNA lincRNA MGP_NODShiLtJ_T0004327.1 MGP_NODShiLtJ_G0003773.1 mouse_genomes_project 3 156621100 156646041 + antisense antisense MGP_NODShiLtJ_T0004328.1 MGP_NODShiLtJ_G0003773.1 mouse_genomes_project 3 156645270 156939740 + antisense antisense MGP_NODShiLtJ_T0062766.1 MGP_NODShiLtJ_G0027562.1 mouse_genomes_project 3 122779240 122784498 + MGP_NODShiLtJ_P0062766 Lamtor5 protein_coding protein_coding MGP_NODShiLtJ_T0062767.1 MGP_NODShiLtJ_G0027562.1 mouse_genomes_project 3 122779381 122784501 + MGP_NODShiLtJ_P0062767 Lamtor5 protein_coding protein_coding MGP_NODShiLtJ_T0007444.1 MGP_NODShiLtJ_G0006096.1 mouse_genomes_project 3 39357108 39364417 - Gm11549 lincRNA lincRNA MGP_NODShiLtJ_T0001121.1 MGP_NODShiLtJ_G0001044.1 mouse_genomes_project 3 37332521 37332635 + TEC TEC MGP_NODShiLtJ_T0001281.1 MGP_NODShiLtJ_G0001202.1 mouse_genomes_project 3 142026585 142029133 - TEC TEC MGP_NODShiLtJ_T0100466.1 MGP_NODShiLtJ_G0038860.1 mouse_genomes_project 3 98624914 98624985 - Rnu73b snoRNA snoRNA MGP_NODShiLtJ_T0062045.1 MGP_NODShiLtJ_G0027392.1 mouse_genomes_project 3 109182346 109186491 - Gabpb2 protein_coding retained_intron MGP_NODShiLtJ_T0062046.1 MGP_NODShiLtJ_G0027392.1 mouse_genomes_project 3 109182482 109214768 - Gabpb2 protein_coding retained_intron MGP_NODShiLtJ_T0062047.1 MGP_NODShiLtJ_G0027392.1 mouse_genomes_project 3 109183427 109213333 - MGP_NODShiLtJ_P0062047 Gabpb2 protein_coding protein_coding MGP_NODShiLtJ_T0062048.1 MGP_NODShiLtJ_G0027392.1 mouse_genomes_project 3 109193659 109214975 - Gabpb2 protein_coding retained_intron MGP_NODShiLtJ_T0062049.1 MGP_NODShiLtJ_G0027392.1 mouse_genomes_project 3 109195824 109214975 - Gabpb2 protein_coding retained_intron MGP_NODShiLtJ_T0062050.1 MGP_NODShiLtJ_G0027392.1 mouse_genomes_project 3 109199256 109214813 - MGP_NODShiLtJ_P0062050 Gabpb2 protein_coding protein_coding MGP_NODShiLtJ_T0062051.1 MGP_NODShiLtJ_G0027392.1 mouse_genomes_project 3 109212294 109214753 - Gabpb2 protein_coding processed_transcript MGP_NODShiLtJ_T0060630.1 MGP_NODShiLtJ_G0027054.1 mouse_genomes_project 3 66234303 66239677 - MGP_NODShiLtJ_P0060630 Gpr171 protein_coding protein_coding MGP_NODShiLtJ_T0063649.1 MGP_NODShiLtJ_G0027733.1 mouse_genomes_project 3 158876175 158885912 + MGP_NODShiLtJ_P0063649 Lamtor3 protein_coding protein_coding MGP_NODShiLtJ_T0063650.1 MGP_NODShiLtJ_G0027733.1 mouse_genomes_project 3 158876195 158877184 + Lamtor3 protein_coding retained_intron MGP_NODShiLtJ_T0063651.1 MGP_NODShiLtJ_G0027733.1 mouse_genomes_project 3 158876195 158886454 + MGP_NODShiLtJ_P0063651 Lamtor3 protein_coding protein_coding MGP_NODShiLtJ_T0063653.1 MGP_NODShiLtJ_G0027733.1 mouse_genomes_project 3 158876231 158885933 + Lamtor3 protein_coding processed_transcript MGP_NODShiLtJ_T0063654.1 MGP_NODShiLtJ_G0027733.1 mouse_genomes_project 3 158876241 158884509 + MGP_NODShiLtJ_P0063654 Lamtor3 protein_coding protein_coding MGP_NODShiLtJ_T0063655.1 MGP_NODShiLtJ_G0027733.1 mouse_genomes_project 3 158876513 158884794 + Lamtor3 protein_coding retained_intron MGP_NODShiLtJ_T0063656.1 MGP_NODShiLtJ_G0027733.1 mouse_genomes_project 3 158882491 158885848 + Lamtor3 protein_coding retained_intron MGP_NODShiLtJ_T0063657.1 MGP_NODShiLtJ_G0027733.1 mouse_genomes_project 3 158883871 158886589 + Lamtor3 protein_coding retained_intron MGP_NODShiLtJ_T0014254.1 MGP_NODShiLtJ_G0012362.1 mouse_genomes_project 3 179812879 179814345 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063918.1 MGP_NODShiLtJ_G0027793.1 mouse_genomes_project 3 168988501 168995787 - MGP_NODShiLtJ_P0063918 4930503B20Rik protein_coding protein_coding MGP_NODShiLtJ_T0063923.1 MGP_NODShiLtJ_G0027793.1 mouse_genomes_project 3 168990690 168992780 - 4930503B20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0063924.1 MGP_NODShiLtJ_G0027793.1 mouse_genomes_project 3 168994035 168995785 - MGP_NODShiLtJ_P0063924 4930503B20Rik protein_coding protein_coding MGP_NODShiLtJ_T0013810.1 MGP_NODShiLtJ_G0011918.1 mouse_genomes_project 3 14159936 14160071 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014068.1 MGP_NODShiLtJ_G0012176.1 mouse_genomes_project 3 109881468 109881615 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063617.1 MGP_NODShiLtJ_G0027726.1 mouse_genomes_project 3 156815460 157115704 - MGP_NODShiLtJ_P0063617 Bank1 protein_coding protein_coding MGP_NODShiLtJ_T0063618.1 MGP_NODShiLtJ_G0027726.1 mouse_genomes_project 3 156815460 157115684 - MGP_NODShiLtJ_P0063618 Bank1 protein_coding protein_coding MGP_NODShiLtJ_T0063619.1 MGP_NODShiLtJ_G0027726.1 mouse_genomes_project 3 156815546 157115663 - MGP_NODShiLtJ_P0063619 Bank1 protein_coding protein_coding MGP_NODShiLtJ_T0063620.1 MGP_NODShiLtJ_G0027726.1 mouse_genomes_project 3 156816019 156816814 - Bank1 protein_coding retained_intron MGP_NODShiLtJ_T0063621.1 MGP_NODShiLtJ_G0027726.1 mouse_genomes_project 3 156816034 156819099 - Bank1 protein_coding retained_intron MGP_NODShiLtJ_T0063622.1 MGP_NODShiLtJ_G0027726.1 mouse_genomes_project 3 156977758 157016917 - Bank1 protein_coding retained_intron MGP_NODShiLtJ_T0061787.1 MGP_NODShiLtJ_G0027297.1 mouse_genomes_project 3 103927707 103949861 + MGP_NODShiLtJ_P0061787 Pglyrp4 protein_coding protein_coding MGP_NODShiLtJ_T0061788.1 MGP_NODShiLtJ_G0027297.1 mouse_genomes_project 3 103927712 103948858 + MGP_NODShiLtJ_P0061788 Pglyrp4 protein_coding protein_coding MGP_NODShiLtJ_T0061789.1 MGP_NODShiLtJ_G0027297.1 mouse_genomes_project 3 103946010 103949859 + Pglyrp4 protein_coding processed_transcript MGP_NODShiLtJ_T0060822.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77461095 77576513 - Ift80 protein_coding retained_intron MGP_NODShiLtJ_T0060823.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77461095 77576497 - MGP_NODShiLtJ_P0060823 Ift80 protein_coding protein_coding MGP_NODShiLtJ_T0060824.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77461121 77576524 - MGP_NODShiLtJ_P0060824 Ift80 protein_coding protein_coding MGP_NODShiLtJ_T0060825.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77461121 77565710 - MGP_NODShiLtJ_P0060825 Ift80 protein_coding protein_coding MGP_NODShiLtJ_T0060826.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77462241 77484884 - Ift80 protein_coding retained_intron MGP_NODShiLtJ_T0060827.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77479571 77479921 - Ift80 protein_coding retained_intron MGP_NODShiLtJ_T0060828.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77482250 77576452 - Ift80 protein_coding retained_intron MGP_NODShiLtJ_T0060829.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77507162 77545139 - Ift80 protein_coding processed_transcript MGP_NODShiLtJ_T0060830.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77535075 77576431 - MGP_NODShiLtJ_P0060830 Ift80 protein_coding protein_coding MGP_NODShiLtJ_T0060831.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77539320 77576438 - MGP_NODShiLtJ_P0060831 Ift80 protein_coding protein_coding MGP_NODShiLtJ_T0060832.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77544697 77576342 - Ift80 protein_coding processed_transcript MGP_NODShiLtJ_T0060833.1 MGP_NODShiLtJ_G0027105.1 mouse_genomes_project 3 77574248 77576479 - Ift80 protein_coding retained_intron MGP_NODShiLtJ_T0007440.1 MGP_NODShiLtJ_G0006092.1 mouse_genomes_project 3 37985448 38004951 - Gm43003 lincRNA lincRNA MGP_NODShiLtJ_T0007559.1 MGP_NODShiLtJ_G0006177.1 mouse_genomes_project 3 108297585 108301110 - 1700040D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0059691.1 MGP_NODShiLtJ_G0026860.1 mouse_genomes_project 3 3201781 3218146 - MGP_NODShiLtJ_P0059691 Pex2 protein_coding protein_coding MGP_NODShiLtJ_T0059692.1 MGP_NODShiLtJ_G0026860.1 mouse_genomes_project 3 3201781 3218146 - MGP_NODShiLtJ_P0059692 Pex2 protein_coding protein_coding MGP_NODShiLtJ_T0059693.1 MGP_NODShiLtJ_G0026860.1 mouse_genomes_project 3 3202090 3205409 - MGP_NODShiLtJ_P0059693 Pex2 protein_coding protein_coding MGP_NODShiLtJ_T0059694.1 MGP_NODShiLtJ_G0026860.1 mouse_genomes_project 3 3202093 3218141 - MGP_NODShiLtJ_P0059694 Pex2 protein_coding protein_coding MGP_NODShiLtJ_T0059695.1 MGP_NODShiLtJ_G0026860.1 mouse_genomes_project 3 3202093 3218235 - MGP_NODShiLtJ_P0059695 Pex2 protein_coding protein_coding MGP_NODShiLtJ_T0059696.1 MGP_NODShiLtJ_G0026860.1 mouse_genomes_project 3 3202097 3218124 - MGP_NODShiLtJ_P0059696 Pex2 protein_coding protein_coding MGP_NODShiLtJ_T0007652.1 MGP_NODShiLtJ_G0006253.1 mouse_genomes_project 3 154910669 154933966 - 4930539C22Rik lincRNA lincRNA MGP_NODShiLtJ_T0063636.1 MGP_NODShiLtJ_G0027730.1 mouse_genomes_project 3 158565096 158568870 + Ddit4l protein_coding processed_transcript MGP_NODShiLtJ_T0063637.1 MGP_NODShiLtJ_G0027730.1 mouse_genomes_project 3 158567147 158571896 + MGP_NODShiLtJ_P0063637 Ddit4l protein_coding protein_coding MGP_NODShiLtJ_T0063638.1 MGP_NODShiLtJ_G0027730.1 mouse_genomes_project 3 158567512 158569645 + MGP_NODShiLtJ_P0063638 Ddit4l protein_coding protein_coding MGP_NODShiLtJ_T0062183.1 MGP_NODShiLtJ_G0027414.1 mouse_genomes_project 3 109985413 109994187 - MGP_NODShiLtJ_P0062183 Mrps21 protein_coding protein_coding MGP_NODShiLtJ_T0062184.1 MGP_NODShiLtJ_G0027414.1 mouse_genomes_project 3 109985433 109993287 - MGP_NODShiLtJ_P0062184 Mrps21 protein_coding protein_coding MGP_NODShiLtJ_T0062185.1 MGP_NODShiLtJ_G0027414.1 mouse_genomes_project 3 109985435 109986087 - Mrps21 protein_coding processed_transcript MGP_NODShiLtJ_T0062186.1 MGP_NODShiLtJ_G0027414.1 mouse_genomes_project 3 109985663 109994035 - MGP_NODShiLtJ_P0062186 Mrps21 protein_coding protein_coding MGP_NODShiLtJ_T0013851.1 MGP_NODShiLtJ_G0011959.1 mouse_genomes_project 3 30288428 30288672 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007709.1 MGP_NODShiLtJ_G0006300.1 mouse_genomes_project 3 174478928 174481444 + 4930555A03Rik lincRNA lincRNA MGP_NODShiLtJ_T0007710.1 MGP_NODShiLtJ_G0006300.1 mouse_genomes_project 3 174478964 174481108 + 4930555A03Rik lincRNA lincRNA MGP_NODShiLtJ_T0007711.1 MGP_NODShiLtJ_G0006300.1 mouse_genomes_project 3 174478965 174480394 + 4930555A03Rik lincRNA lincRNA MGP_NODShiLtJ_T0007712.1 MGP_NODShiLtJ_G0006300.1 mouse_genomes_project 3 174479805 174481106 + 4930555A03Rik lincRNA lincRNA MGP_NODShiLtJ_T0063249.1 MGP_NODShiLtJ_G0027663.1 mouse_genomes_project 3 142088438 142205175 + MGP_NODShiLtJ_P0063249 Sec24d protein_coding protein_coding MGP_NODShiLtJ_T0063250.1 MGP_NODShiLtJ_G0027663.1 mouse_genomes_project 3 142088462 142111983 + Sec24d protein_coding retained_intron MGP_NODShiLtJ_T0063251.1 MGP_NODShiLtJ_G0027663.1 mouse_genomes_project 3 142088473 142096580 + MGP_NODShiLtJ_P0063251 Sec24d protein_coding protein_coding MGP_NODShiLtJ_T0063252.1 MGP_NODShiLtJ_G0027663.1 mouse_genomes_project 3 142123044 142205170 + Sec24d protein_coding retained_intron MGP_NODShiLtJ_T0063253.1 MGP_NODShiLtJ_G0027663.1 mouse_genomes_project 3 142173057 142174992 + Sec24d protein_coding retained_intron MGP_NODShiLtJ_T0063254.1 MGP_NODShiLtJ_G0027663.1 mouse_genomes_project 3 142175524 142189498 + Sec24d protein_coding processed_transcript MGP_NODShiLtJ_T0063255.1 MGP_NODShiLtJ_G0027663.1 mouse_genomes_project 3 142194370 142195428 + Sec24d protein_coding retained_intron MGP_NODShiLtJ_T0063256.1 MGP_NODShiLtJ_G0027663.1 mouse_genomes_project 3 142204247 142205170 + Sec24d protein_coding retained_intron MGP_NODShiLtJ_T0014071.1 MGP_NODShiLtJ_G0012179.1 mouse_genomes_project 3 110100396 110100756 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007423.1 MGP_NODShiLtJ_G0006077.1 mouse_genomes_project 3 30884903 30889224 - lincRNA lincRNA MGP_NODShiLtJ_T0063713.1 MGP_NODShiLtJ_G0027748.1 mouse_genomes_project 3 159783597 159964293 + MGP_NODShiLtJ_P0063713 Tspan5 protein_coding protein_coding MGP_NODShiLtJ_T0063714.1 MGP_NODShiLtJ_G0027748.1 mouse_genomes_project 3 159783707 159960908 + MGP_NODShiLtJ_P0063714 Tspan5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063715.1 MGP_NODShiLtJ_G0027748.1 mouse_genomes_project 3 159783907 159947803 + MGP_NODShiLtJ_P0063715 Tspan5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063716.1 MGP_NODShiLtJ_G0027748.1 mouse_genomes_project 3 159784171 159945435 + MGP_NODShiLtJ_P0063716 Tspan5 protein_coding protein_coding MGP_NODShiLtJ_T0063717.1 MGP_NODShiLtJ_G0027748.1 mouse_genomes_project 3 159820720 159958977 + MGP_NODShiLtJ_P0063717 Tspan5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063718.1 MGP_NODShiLtJ_G0027748.1 mouse_genomes_project 3 159887831 159960915 + MGP_NODShiLtJ_P0063718 Tspan5 protein_coding protein_coding MGP_NODShiLtJ_T0060560.1 MGP_NODShiLtJ_G0027036.1 mouse_genomes_project 3 62159175 62171394 - MGP_NODShiLtJ_P0060560 Gm21954 protein_coding protein_coding MGP_NODShiLtJ_T0010421.1 MGP_NODShiLtJ_G0008554.1 mouse_genomes_project 3 100293263 100293350 + Gm24109 miRNA miRNA MGP_NODShiLtJ_T0061776.1 MGP_NODShiLtJ_G0027292.1 mouse_genomes_project 3 103794331 103797583 + MGP_NODShiLtJ_P0061776 S100a5 protein_coding protein_coding MGP_NODShiLtJ_T0061777.1 MGP_NODShiLtJ_G0027292.1 mouse_genomes_project 3 103795612 103797583 + MGP_NODShiLtJ_P0061777 S100a5 protein_coding protein_coding MGP_NODShiLtJ_T0004258.1 MGP_NODShiLtJ_G0003729.1 mouse_genomes_project 3 113826912 113833522 - Gm43120 antisense antisense MGP_NODShiLtJ_T0062245.1 MGP_NODShiLtJ_G0027429.1 mouse_genomes_project 3 110369858 110372479 + MGP_NODShiLtJ_P0062245 Hist2h2be protein_coding protein_coding MGP_NODShiLtJ_T0013811.1 MGP_NODShiLtJ_G0011919.1 mouse_genomes_project 3 14226345 14226824 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063790.1 MGP_NODShiLtJ_G0027763.1 mouse_genomes_project 3 166149997 166164773 - MGP_NODShiLtJ_P0063790 Lmo4 protein_coding protein_coding MGP_NODShiLtJ_T0063791.1 MGP_NODShiLtJ_G0027763.1 mouse_genomes_project 3 166149997 166168360 - MGP_NODShiLtJ_P0063791 Lmo4 protein_coding protein_coding MGP_NODShiLtJ_T0063792.1 MGP_NODShiLtJ_G0027763.1 mouse_genomes_project 3 166150100 166164709 - MGP_NODShiLtJ_P0063792 Lmo4 protein_coding protein_coding MGP_NODShiLtJ_T0063793.1 MGP_NODShiLtJ_G0027763.1 mouse_genomes_project 3 166150151 166168360 - MGP_NODShiLtJ_P0063793 Lmo4 protein_coding protein_coding MGP_NODShiLtJ_T0063794.1 MGP_NODShiLtJ_G0027763.1 mouse_genomes_project 3 166150526 166156227 - Lmo4 protein_coding retained_intron MGP_NODShiLtJ_T0063795.1 MGP_NODShiLtJ_G0027763.1 mouse_genomes_project 3 166155391 166165336 - MGP_NODShiLtJ_P0063795 Lmo4 protein_coding protein_coding MGP_NODShiLtJ_T0063796.1 MGP_NODShiLtJ_G0027763.1 mouse_genomes_project 3 166163149 166168320 - Lmo4 protein_coding retained_intron MGP_NODShiLtJ_T0063797.1 MGP_NODShiLtJ_G0027763.1 mouse_genomes_project 3 166164003 166164677 - Lmo4 protein_coding retained_intron MGP_NODShiLtJ_T0004271.1 MGP_NODShiLtJ_G0003737.1 mouse_genomes_project 3 120169656 120180889 + Gm42956 antisense antisense MGP_NODShiLtJ_T0014174.1 MGP_NODShiLtJ_G0012282.1 mouse_genomes_project 3 144198029 144199041 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061259.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101101785 101134417 + MGP_NODShiLtJ_P0061259 Smg5 protein_coding protein_coding MGP_NODShiLtJ_T0061260.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101101836 101118249 + Smg5 protein_coding retained_intron MGP_NODShiLtJ_T0061261.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101101890 101108845 + Smg5 protein_coding retained_intron MGP_NODShiLtJ_T0061262.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101106248 101113124 + Smg5 protein_coding processed_transcript MGP_NODShiLtJ_T0061263.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101107969 101116251 + MGP_NODShiLtJ_P0061263 Smg5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061264.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101118010 101120157 + Smg5 protein_coding retained_intron MGP_NODShiLtJ_T0061265.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101130272 101131716 + Smg5 protein_coding retained_intron MGP_NODShiLtJ_T0061266.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101130425 101133349 + Smg5 protein_coding processed_transcript MGP_NODShiLtJ_T0061267.1 MGP_NODShiLtJ_G0027206.1 mouse_genomes_project 3 101132614 101133170 + Smg5 protein_coding retained_intron MGP_NODShiLtJ_T0061707.1 MGP_NODShiLtJ_G0027277.1 mouse_genomes_project 3 103444880 103512001 + MGP_NODShiLtJ_P0061707 Gatad2b protein_coding protein_coding MGP_NODShiLtJ_T0061708.1 MGP_NODShiLtJ_G0027277.1 mouse_genomes_project 3 103476018 103506073 + Gatad2b protein_coding retained_intron MGP_NODShiLtJ_T0061709.1 MGP_NODShiLtJ_G0027277.1 mouse_genomes_project 3 103493176 103495928 + Gatad2b protein_coding retained_intron MGP_NODShiLtJ_T0061710.1 MGP_NODShiLtJ_G0027277.1 mouse_genomes_project 3 103493801 103511748 + MGP_NODShiLtJ_P0061710 Gatad2b protein_coding protein_coding MGP_NODShiLtJ_T0061711.1 MGP_NODShiLtJ_G0027277.1 mouse_genomes_project 3 103493803 103511741 + Gatad2b protein_coding retained_intron MGP_NODShiLtJ_T0061712.1 MGP_NODShiLtJ_G0027277.1 mouse_genomes_project 3 103493803 103511707 + MGP_NODShiLtJ_P0061712 Gatad2b protein_coding protein_coding MGP_NODShiLtJ_T0061713.1 MGP_NODShiLtJ_G0027277.1 mouse_genomes_project 3 103493803 103519292 + MGP_NODShiLtJ_P0061713 Gatad2b protein_coding protein_coding MGP_NODShiLtJ_T0061714.1 MGP_NODShiLtJ_G0027277.1 mouse_genomes_project 3 103504938 103509770 + MGP_NODShiLtJ_P0061714 Gatad2b protein_coding protein_coding MGP_NODShiLtJ_T0062888.1 MGP_NODShiLtJ_G0027593.1 mouse_genomes_project 3 123979341 124004043 - MGP_NODShiLtJ_P0062888 Celsr2 protein_coding protein_coding MGP_NODShiLtJ_T0062889.1 MGP_NODShiLtJ_G0027593.1 mouse_genomes_project 3 123980712 123987442 - MGP_NODShiLtJ_P0062889 Celsr2 protein_coding protein_coding MGP_NODShiLtJ_T0062890.1 MGP_NODShiLtJ_G0027593.1 mouse_genomes_project 3 123980869 123981924 - Celsr2 protein_coding processed_transcript MGP_NODShiLtJ_T0062891.1 MGP_NODShiLtJ_G0027593.1 mouse_genomes_project 3 123981090 123982015 - Celsr2 protein_coding retained_intron MGP_NODShiLtJ_T0062892.1 MGP_NODShiLtJ_G0027593.1 mouse_genomes_project 3 123982025 123982793 - Celsr2 protein_coding retained_intron MGP_NODShiLtJ_T0062893.1 MGP_NODShiLtJ_G0027593.1 mouse_genomes_project 3 123984050 123984984 - Celsr2 protein_coding retained_intron MGP_NODShiLtJ_T0062894.1 MGP_NODShiLtJ_G0027593.1 mouse_genomes_project 3 123989750 123991080 - Celsr2 protein_coding retained_intron MGP_NODShiLtJ_T0101335.1 MGP_NODShiLtJ_G0039575.1 mouse_genomes_project 3 67016902 67051813 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0013787.1 MGP_NODShiLtJ_G0011895.1 mouse_genomes_project 3 6919656 6920464 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014025.1 MGP_NODShiLtJ_G0012133.1 mouse_genomes_project 3 97540428 97541089 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013986.1 MGP_NODShiLtJ_G0012094.1 mouse_genomes_project 3 78661631 78661787 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001315.1 MGP_NODShiLtJ_G0001235.1 mouse_genomes_project 3 150596865 150603015 + TEC TEC MGP_NODShiLtJ_T0098366.1 MGP_NODShiLtJ_G0036771.1 mouse_genomes_project 3 121014270 121017598 - Gm43329 sense_intronic sense_intronic MGP_NODShiLtJ_T0063369.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147530590 147561563 - MGP_NODShiLtJ_P0063369 Ap1ar protein_coding protein_coding MGP_NODShiLtJ_T0063370.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147530595 147561551 - MGP_NODShiLtJ_P0063370 Ap1ar protein_coding protein_coding MGP_NODShiLtJ_T0063371.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147530850 147532448 - Ap1ar protein_coding retained_intron MGP_NODShiLtJ_T0063372.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147535637 147536272 - Ap1ar protein_coding retained_intron MGP_NODShiLtJ_T0063373.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147536828 147540858 - Ap1ar protein_coding retained_intron MGP_NODShiLtJ_T0063374.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147538892 147540547 - Ap1ar protein_coding retained_intron MGP_NODShiLtJ_T0063375.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147542916 147549963 - Ap1ar protein_coding retained_intron MGP_NODShiLtJ_T0063376.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147543984 147561271 - Ap1ar protein_coding retained_intron MGP_NODShiLtJ_T0063377.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147543985 147545871 - Ap1ar protein_coding retained_intron MGP_NODShiLtJ_T0063378.1 MGP_NODShiLtJ_G0027681.1 mouse_genomes_project 3 147544020 147561296 - MGP_NODShiLtJ_P0063378 Ap1ar protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007433.1 MGP_NODShiLtJ_G0006086.1 mouse_genomes_project 3 37060609 37068334 - Gm20515 lincRNA lincRNA MGP_NODShiLtJ_T0100461.1 MGP_NODShiLtJ_G0038855.1 mouse_genomes_project 3 90631110 90631242 + Gm23440 snoRNA snoRNA MGP_NODShiLtJ_T0007694.1 MGP_NODShiLtJ_G0006289.1 mouse_genomes_project 3 168672196 168687564 - Gm10636 lincRNA lincRNA MGP_NODShiLtJ_T0001252.1 MGP_NODShiLtJ_G0001173.1 mouse_genomes_project 3 121946396 121948429 + TEC TEC MGP_NODShiLtJ_T0004291.1 MGP_NODShiLtJ_G0003744.1 mouse_genomes_project 3 123858222 123860203 - antisense antisense MGP_NODShiLtJ_T0098357.1 MGP_NODShiLtJ_G0036762.1 mouse_genomes_project 3 119626374 119628662 - A530041M06Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0062582.1 MGP_NODShiLtJ_G0027517.1 mouse_genomes_project 3 118845804 118877873 + MGP_NODShiLtJ_P0062582 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0101856.1 MGP_NODShiLtJ_G0040024.1 mouse_genomes_project 3 66713227 66713464 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100451.1 MGP_NODShiLtJ_G0038845.1 mouse_genomes_project 3 62688059 62688191 - Gm22784 snoRNA snoRNA MGP_NODShiLtJ_T0101891.1 MGP_NODShiLtJ_G0040059.1 mouse_genomes_project 3 121468518 121469862 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0063645.1 MGP_NODShiLtJ_G0027732.1 mouse_genomes_project 3 158825351 158874214 + MGP_NODShiLtJ_P0063645 Dnajb14 protein_coding protein_coding MGP_NODShiLtJ_T0063646.1 MGP_NODShiLtJ_G0027732.1 mouse_genomes_project 3 158825563 158855257 + Dnajb14 protein_coding retained_intron MGP_NODShiLtJ_T0063647.1 MGP_NODShiLtJ_G0027732.1 mouse_genomes_project 3 158825842 158861490 + MGP_NODShiLtJ_P0063647 Dnajb14 protein_coding protein_coding MGP_NODShiLtJ_T0063648.1 MGP_NODShiLtJ_G0027732.1 mouse_genomes_project 3 158863437 158867104 + Dnajb14 protein_coding retained_intron MGP_NODShiLtJ_T0001316.1 MGP_NODShiLtJ_G0001236.1 mouse_genomes_project 3 150620235 150622374 + TEC TEC MGP_NODShiLtJ_T0061308.1 MGP_NODShiLtJ_G0027215.1 mouse_genomes_project 3 101387938 101395747 - MGP_NODShiLtJ_P0061308 Rab25 protein_coding protein_coding MGP_NODShiLtJ_T0061309.1 MGP_NODShiLtJ_G0027215.1 mouse_genomes_project 3 101388218 101395696 - MGP_NODShiLtJ_P0061309 Rab25 protein_coding protein_coding MGP_NODShiLtJ_T0061310.1 MGP_NODShiLtJ_G0027215.1 mouse_genomes_project 3 101388585 101389424 - Rab25 protein_coding retained_intron MGP_NODShiLtJ_T0061311.1 MGP_NODShiLtJ_G0027215.1 mouse_genomes_project 3 101390551 101395729 - Rab25 protein_coding retained_intron MGP_NODShiLtJ_T0014113.1 MGP_NODShiLtJ_G0012221.1 mouse_genomes_project 3 122850741 122851486 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099173.1 MGP_NODShiLtJ_G0037567.1 mouse_genomes_project 3 66105990 66106092 + Gm22491 snRNA snRNA MGP_NODShiLtJ_T0063424.1 MGP_NODShiLtJ_G0027691.1 mouse_genomes_project 3 149878050 149901280 + MGP_NODShiLtJ_P0063424 Pla2g12a protein_coding protein_coding MGP_NODShiLtJ_T0063425.1 MGP_NODShiLtJ_G0027691.1 mouse_genomes_project 3 149878258 149900384 + MGP_NODShiLtJ_P0063425 Pla2g12a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063426.1 MGP_NODShiLtJ_G0027691.1 mouse_genomes_project 3 149882135 149900402 + MGP_NODShiLtJ_P0063426 Pla2g12a protein_coding protein_coding MGP_NODShiLtJ_T0063427.1 MGP_NODShiLtJ_G0027691.1 mouse_genomes_project 3 149897077 149901276 + Pla2g12a protein_coding retained_intron MGP_NODShiLtJ_T0061944.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108793920 108839394 + MGP_NODShiLtJ_P0061944 Pogz protein_coding protein_coding MGP_NODShiLtJ_T0061945.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108794050 108817707 + Pogz protein_coding processed_transcript MGP_NODShiLtJ_T0061946.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108794066 108822583 + Pogz protein_coding retained_intron MGP_NODShiLtJ_T0061947.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108794066 108839392 + MGP_NODShiLtJ_P0061947 Pogz protein_coding protein_coding MGP_NODShiLtJ_T0061948.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108794066 108837402 + MGP_NODShiLtJ_P0061948 Pogz protein_coding protein_coding MGP_NODShiLtJ_T0061949.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108794066 108837945 + MGP_NODShiLtJ_P0061949 Pogz protein_coding protein_coding MGP_NODShiLtJ_T0061950.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108819854 108820677 + Pogz protein_coding retained_intron MGP_NODShiLtJ_T0061951.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108820645 108829400 + MGP_NODShiLtJ_P0061951 Pogz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061952.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108828406 108830834 + Pogz protein_coding processed_transcript MGP_NODShiLtJ_T0061953.1 MGP_NODShiLtJ_G0027378.1 mouse_genomes_project 3 108834724 108836036 + Pogz protein_coding retained_intron MGP_NODShiLtJ_T0014210.1 MGP_NODShiLtJ_G0012318.1 mouse_genomes_project 3 157122533 157124038 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098313.1 MGP_NODShiLtJ_G0036719.1 mouse_genomes_project 3 91247963 91248833 - Gm3513 sense_intronic sense_intronic MGP_NODShiLtJ_T0099155.1 MGP_NODShiLtJ_G0037549.1 mouse_genomes_project 3 18697178 18697342 - Gm23686 snRNA snRNA MGP_NODShiLtJ_T0060339.1 MGP_NODShiLtJ_G0026997.1 mouse_genomes_project 3 44304496 44323511 - MGP_NODShiLtJ_P0060339 protein_coding protein_coding MGP_NODShiLtJ_T0060340.1 MGP_NODShiLtJ_G0026997.1 mouse_genomes_project 3 44306690 44308807 - protein_coding retained_intron MGP_NODShiLtJ_T0099174.1 MGP_NODShiLtJ_G0037568.1 mouse_genomes_project 3 66109224 66109396 - Gm25572 snRNA snRNA MGP_NODShiLtJ_T0007533.1 MGP_NODShiLtJ_G0006163.1 mouse_genomes_project 3 96698385 96722858 - 4930565D16Rik lincRNA lincRNA MGP_NODShiLtJ_T0062589.1 MGP_NODShiLtJ_G0027518.1 mouse_genomes_project 3 118870708 118877873 + MGP_NODShiLtJ_P0062589 Bcl2l15 protein_coding protein_coding MGP_NODShiLtJ_T0062590.1 MGP_NODShiLtJ_G0027518.1 mouse_genomes_project 3 118870878 118895029 + MGP_NODShiLtJ_P0062590 Bcl2l15 protein_coding protein_coding MGP_NODShiLtJ_T0062591.1 MGP_NODShiLtJ_G0027518.1 mouse_genomes_project 3 118870939 118886245 + MGP_NODShiLtJ_P0062591 Bcl2l15 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062592.1 MGP_NODShiLtJ_G0027518.1 mouse_genomes_project 3 118885972 118894249 + Bcl2l15 protein_coding processed_transcript MGP_NODShiLtJ_T0062593.1 MGP_NODShiLtJ_G0027518.1 mouse_genomes_project 3 118892412 118894111 + Bcl2l15 protein_coding processed_transcript MGP_NODShiLtJ_T0063573.1 MGP_NODShiLtJ_G0027720.1 mouse_genomes_project 3 156084767 156102514 - MGP_NODShiLtJ_P0063573 Cisd2 protein_coding protein_coding MGP_NODShiLtJ_T0063574.1 MGP_NODShiLtJ_G0027720.1 mouse_genomes_project 3 156088362 156101996 - MGP_NODShiLtJ_P0063574 Cisd2 protein_coding protein_coding MGP_NODShiLtJ_T0063575.1 MGP_NODShiLtJ_G0027720.1 mouse_genomes_project 3 156098540 156101993 - Cisd2 protein_coding retained_intron MGP_NODShiLtJ_T0063576.1 MGP_NODShiLtJ_G0027720.1 mouse_genomes_project 3 156099446 156101668 - Cisd2 protein_coding processed_transcript MGP_NODShiLtJ_T0014033.1 MGP_NODShiLtJ_G0012141.1 mouse_genomes_project 3 99647951 99648898 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013892.1 MGP_NODShiLtJ_G0012000.1 mouse_genomes_project 3 46007461 46007948 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007503.1 MGP_NODShiLtJ_G0006138.1 mouse_genomes_project 3 76031057 76033316 - 4930402C01Rik lincRNA lincRNA MGP_NODShiLtJ_T0063094.1 MGP_NODShiLtJ_G0027634.1 mouse_genomes_project 3 134725640 134791067 + MGP_NODShiLtJ_P0063094 Frrs1 protein_coding protein_coding MGP_NODShiLtJ_T0063095.1 MGP_NODShiLtJ_G0027634.1 mouse_genomes_project 3 134725743 134776444 + MGP_NODShiLtJ_P0063095 Frrs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063096.1 MGP_NODShiLtJ_G0027634.1 mouse_genomes_project 3 134761732 134796904 + MGP_NODShiLtJ_P0063096 Frrs1 protein_coding protein_coding MGP_NODShiLtJ_T0063097.1 MGP_NODShiLtJ_G0027634.1 mouse_genomes_project 3 134776364 134782158 + Frrs1 protein_coding retained_intron MGP_NODShiLtJ_T0063098.1 MGP_NODShiLtJ_G0027634.1 mouse_genomes_project 3 134777114 134786348 + Frrs1 protein_coding retained_intron MGP_NODShiLtJ_T0063099.1 MGP_NODShiLtJ_G0027634.1 mouse_genomes_project 3 134782146 134790037 + MGP_NODShiLtJ_P0063099 Frrs1 protein_coding protein_coding MGP_NODShiLtJ_T0001174.1 MGP_NODShiLtJ_G0001095.1 mouse_genomes_project 3 58319657 58321874 - TEC TEC MGP_NODShiLtJ_T0013895.1 MGP_NODShiLtJ_G0012003.1 mouse_genomes_project 3 47585730 47586259 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062116.1 MGP_NODShiLtJ_G0027405.1 mouse_genomes_project 3 109624377 109659228 + MGP_NODShiLtJ_P0062116 Hormad1 protein_coding protein_coding MGP_NODShiLtJ_T0062117.1 MGP_NODShiLtJ_G0027405.1 mouse_genomes_project 3 109624378 109656311 + MGP_NODShiLtJ_P0062117 Hormad1 protein_coding protein_coding MGP_NODShiLtJ_T0062118.1 MGP_NODShiLtJ_G0027405.1 mouse_genomes_project 3 109624378 109659228 + MGP_NODShiLtJ_P0062118 Hormad1 protein_coding protein_coding MGP_NODShiLtJ_T0062119.1 MGP_NODShiLtJ_G0027405.1 mouse_genomes_project 3 109624378 109659228 + MGP_NODShiLtJ_P0062119 Hormad1 protein_coding protein_coding MGP_NODShiLtJ_T0100434.1 MGP_NODShiLtJ_G0038828.1 mouse_genomes_project 3 9739112 9739230 - Gm22795 snoRNA snoRNA MGP_NODShiLtJ_T0061055.1 MGP_NODShiLtJ_G0027160.1 mouse_genomes_project 3 96945299 96948758 + MGP_NODShiLtJ_P0061055 Tigd4 protein_coding protein_coding MGP_NODShiLtJ_T0061198.1 MGP_NODShiLtJ_G0027193.1 mouse_genomes_project 3 100713273 100729838 - MGP_NODShiLtJ_P0061198 Bcan protein_coding protein_coding MGP_NODShiLtJ_T0061199.1 MGP_NODShiLtJ_G0027193.1 mouse_genomes_project 3 100718252 100721812 - Bcan protein_coding retained_intron MGP_NODShiLtJ_T0061200.1 MGP_NODShiLtJ_G0027193.1 mouse_genomes_project 3 100718252 100725213 - Bcan protein_coding retained_intron MGP_NODShiLtJ_T0061201.1 MGP_NODShiLtJ_G0027193.1 mouse_genomes_project 3 100719332 100723723 - Bcan protein_coding retained_intron MGP_NODShiLtJ_T0061202.1 MGP_NODShiLtJ_G0027193.1 mouse_genomes_project 3 100723802 100724623 - Bcan protein_coding retained_intron MGP_NODShiLtJ_T0061203.1 MGP_NODShiLtJ_G0027193.1 mouse_genomes_project 3 100724490 100729242 - MGP_NODShiLtJ_P0061203 Bcan protein_coding protein_coding MGP_NODShiLtJ_T0014236.1 MGP_NODShiLtJ_G0012344.1 mouse_genomes_project 3 166797791 166799466 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007389.1 MGP_NODShiLtJ_G0006053.1 mouse_genomes_project 3 7588505 7600388 + 4930539M17Rik lincRNA lincRNA MGP_NODShiLtJ_T0099184.1 MGP_NODShiLtJ_G0037578.1 mouse_genomes_project 3 91561790 91561893 + Gm26420 snRNA snRNA MGP_NODShiLtJ_T0062396.1 MGP_NODShiLtJ_G0027472.1 mouse_genomes_project 3 113085607 113099391 - MGP_NODShiLtJ_P0062396 protein_coding protein_coding MGP_NODShiLtJ_T0061026.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96494274 96649812 - MGP_NODShiLtJ_P0061026 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061027.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96494275 96603658 - MGP_NODShiLtJ_P0061027 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061028.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96494276 96563469 - MGP_NODShiLtJ_P0061028 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061029.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96495709 96563457 - MGP_NODShiLtJ_P0061029 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061030.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96497172 96555518 - MGP_NODShiLtJ_P0061030 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061031.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96497530 96563425 - Trim2 protein_coding retained_intron MGP_NODShiLtJ_T0061032.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96497545 96614650 - MGP_NODShiLtJ_P0061032 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061034.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96517700 96533458 - Trim2 protein_coding retained_intron MGP_NODShiLtJ_T0061035.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96531320 96563454 - Trim2 protein_coding retained_intron MGP_NODShiLtJ_T0061036.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96533596 96534483 - Trim2 protein_coding processed_transcript MGP_NODShiLtJ_T0061037.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96535151 96650400 - MGP_NODShiLtJ_P0061037 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061038.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96535162 96650449 - MGP_NODShiLtJ_P0061038 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061039.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96536310 96603215 - MGP_NODShiLtJ_P0061039 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061040.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96549158 96563441 - Trim2 protein_coding retained_intron MGP_NODShiLtJ_T0061041.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96550458 96563454 - Trim2 protein_coding retained_intron MGP_NODShiLtJ_T0061042.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96551060 96563454 - MGP_NODShiLtJ_P0061042 Trim2 protein_coding protein_coding MGP_NODShiLtJ_T0061043.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96601529 96603215 - Trim2 protein_coding processed_transcript MGP_NODShiLtJ_T0061044.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96644964 96649744 - Trim2 protein_coding processed_transcript MGP_NODShiLtJ_T0061045.1 MGP_NODShiLtJ_G0027155.1 mouse_genomes_project 3 96649848 96651880 - Trim2 protein_coding processed_transcript MGP_NODShiLtJ_T0004317.1 MGP_NODShiLtJ_G0003765.1 mouse_genomes_project 3 149703324 149714660 + Gm42697 antisense antisense MGP_NODShiLtJ_T0063875.1 MGP_NODShiLtJ_G0027783.1 mouse_genomes_project 3 168396242 168404401 + MGP_NODShiLtJ_P0063875 Mcoln3 protein_coding protein_coding MGP_NODShiLtJ_T0063876.1 MGP_NODShiLtJ_G0027783.1 mouse_genomes_project 3 168400457 168422501 + MGP_NODShiLtJ_P0063876 Mcoln3 protein_coding protein_coding MGP_NODShiLtJ_T0063877.1 MGP_NODShiLtJ_G0027783.1 mouse_genomes_project 3 168419774 168421358 + Mcoln3 protein_coding retained_intron MGP_NODShiLtJ_T0014212.1 MGP_NODShiLtJ_G0012320.1 mouse_genomes_project 3 157812596 157812912 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007587.1 MGP_NODShiLtJ_G0006202.1 mouse_genomes_project 3 119465091 119481397 - Gm5546 lincRNA lincRNA MGP_NODShiLtJ_T0004358.1 MGP_NODShiLtJ_G0003796.1 mouse_genomes_project 3 181923573 181925168 + 1810013D15Rik antisense antisense MGP_NODShiLtJ_T0004359.1 MGP_NODShiLtJ_G0003796.1 mouse_genomes_project 3 181923835 181937468 + 1810013D15Rik antisense antisense MGP_NODShiLtJ_T0061216.1 MGP_NODShiLtJ_G0027198.1 mouse_genomes_project 3 100823611 100870597 + MGP_NODShiLtJ_P0061216 Iqgap3 protein_coding protein_coding MGP_NODShiLtJ_T0061217.1 MGP_NODShiLtJ_G0027198.1 mouse_genomes_project 3 100823660 100831629 + Iqgap3 protein_coding retained_intron MGP_NODShiLtJ_T0061218.1 MGP_NODShiLtJ_G0027198.1 mouse_genomes_project 3 100823668 100857373 + MGP_NODShiLtJ_P0061218 Iqgap3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061219.1 MGP_NODShiLtJ_G0027198.1 mouse_genomes_project 3 100823696 100869825 + MGP_NODShiLtJ_P0061219 Iqgap3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061220.1 MGP_NODShiLtJ_G0027198.1 mouse_genomes_project 3 100829078 100831622 + Iqgap3 protein_coding retained_intron MGP_NODShiLtJ_T0061221.1 MGP_NODShiLtJ_G0027198.1 mouse_genomes_project 3 100852846 100870593 + MGP_NODShiLtJ_P0061221 Iqgap3 protein_coding protein_coding MGP_NODShiLtJ_T0061222.1 MGP_NODShiLtJ_G0027198.1 mouse_genomes_project 3 100856104 100861695 + Iqgap3 protein_coding retained_intron MGP_NODShiLtJ_T0001265.1 MGP_NODShiLtJ_G0001186.1 mouse_genomes_project 3 134832500 134836472 - TEC TEC MGP_NODShiLtJ_T0001172.1 MGP_NODShiLtJ_G0001094.1 mouse_genomes_project 3 58236451 58238277 - TEC TEC MGP_NODShiLtJ_T0001173.1 MGP_NODShiLtJ_G0001094.1 mouse_genomes_project 3 58236452 58238277 - TEC pseudogene MGP_NODShiLtJ_T0062461.1 MGP_NODShiLtJ_G0027495.1 mouse_genomes_project 3 116685133 116751465 - MGP_NODShiLtJ_P0062461 Slc22a15 protein_coding protein_coding MGP_NODShiLtJ_T0062462.1 MGP_NODShiLtJ_G0027495.1 mouse_genomes_project 3 116689538 116751521 - MGP_NODShiLtJ_P0062462 Slc22a15 protein_coding protein_coding MGP_NODShiLtJ_T0062463.1 MGP_NODShiLtJ_G0027495.1 mouse_genomes_project 3 116689562 116721092 - Slc22a15 protein_coding processed_transcript MGP_NODShiLtJ_T0062464.1 MGP_NODShiLtJ_G0027495.1 mouse_genomes_project 3 116693108 116708501 - Slc22a15 protein_coding retained_intron MGP_NODShiLtJ_T0062465.1 MGP_NODShiLtJ_G0027495.1 mouse_genomes_project 3 116694346 116751451 - MGP_NODShiLtJ_P0062465 Slc22a15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062466.1 MGP_NODShiLtJ_G0027495.1 mouse_genomes_project 3 116702254 116707228 - Slc22a15 protein_coding retained_intron MGP_NODShiLtJ_T0062467.1 MGP_NODShiLtJ_G0027495.1 mouse_genomes_project 3 116748076 116751525 - Slc22a15 protein_coding processed_transcript MGP_NODShiLtJ_T0098355.1 MGP_NODShiLtJ_G0036760.1 mouse_genomes_project 3 119289491 119297251 - sense_intronic sense_intronic MGP_NODShiLtJ_T0063176.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140630276 140653006 + MGP_NODShiLtJ_P0063176 Arhgap29 protein_coding protein_coding MGP_NODShiLtJ_T0063177.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140630964 140698335 + MGP_NODShiLtJ_P0063177 Arhgap29 protein_coding protein_coding MGP_NODShiLtJ_T0063178.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140630965 140668565 + MGP_NODShiLtJ_P0063178 Arhgap29 protein_coding protein_coding MGP_NODShiLtJ_T0063179.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140646905 140672448 + MGP_NODShiLtJ_P0063179 Arhgap29 protein_coding protein_coding MGP_NODShiLtJ_T0063180.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140646905 140691496 + MGP_NODShiLtJ_P0063180 Arhgap29 protein_coding protein_coding MGP_NODShiLtJ_T0063181.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140646921 140696557 + MGP_NODShiLtJ_P0063181 Arhgap29 protein_coding protein_coding MGP_NODShiLtJ_T0063182.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140661180 140672543 + Arhgap29 protein_coding retained_intron MGP_NODShiLtJ_T0063183.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140668517 140672217 + Arhgap29 protein_coding retained_intron MGP_NODShiLtJ_T0063184.1 MGP_NODShiLtJ_G0027650.1 mouse_genomes_project 3 140682673 140687380 + Arhgap29 protein_coding retained_intron MGP_NODShiLtJ_T0014134.1 MGP_NODShiLtJ_G0012242.1 mouse_genomes_project 3 129286938 129287331 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001188.1 MGP_NODShiLtJ_G0001109.1 mouse_genomes_project 3 62183734 62187127 + TEC TEC MGP_NODShiLtJ_T0060688.1 MGP_NODShiLtJ_G0027069.1 mouse_genomes_project 3 70076720 70205967 + MGP_NODShiLtJ_P0060688 Arhgef26 protein_coding protein_coding MGP_NODShiLtJ_T0060689.1 MGP_NODShiLtJ_G0027069.1 mouse_genomes_project 3 70077375 70116653 + Arhgef26 protein_coding processed_transcript MGP_NODShiLtJ_T0060690.1 MGP_NODShiLtJ_G0027069.1 mouse_genomes_project 3 70078766 70115054 + Arhgef26 protein_coding retained_intron MGP_NODShiLtJ_T0060691.1 MGP_NODShiLtJ_G0027069.1 mouse_genomes_project 3 70079477 70117925 + Arhgef26 protein_coding processed_transcript MGP_NODShiLtJ_T0060692.1 MGP_NODShiLtJ_G0027069.1 mouse_genomes_project 3 70161482 70203958 + MGP_NODShiLtJ_P0060692 Arhgef26 protein_coding protein_coding MGP_NODShiLtJ_T0060693.1 MGP_NODShiLtJ_G0027069.1 mouse_genomes_project 3 70168997 70171829 + Arhgef26 protein_coding retained_intron MGP_NODShiLtJ_T0059894.1 MGP_NODShiLtJ_G0026919.1 mouse_genomes_project 3 25139902 26323026 - MGP_NODShiLtJ_P0059894 Naaladl2 protein_coding protein_coding MGP_NODShiLtJ_T0059895.1 MGP_NODShiLtJ_G0026919.1 mouse_genomes_project 3 25148660 25337251 - Naaladl2 protein_coding processed_transcript MGP_NODShiLtJ_T0059896.1 MGP_NODShiLtJ_G0026919.1 mouse_genomes_project 3 25149310 25366350 - Naaladl2 protein_coding processed_transcript MGP_NODShiLtJ_T0059897.1 MGP_NODShiLtJ_G0026919.1 mouse_genomes_project 3 25979669 26733160 - Naaladl2 protein_coding retained_intron MGP_NODShiLtJ_T0007452.1 MGP_NODShiLtJ_G0006103.1 mouse_genomes_project 3 41420534 41424779 + Gm42920 lincRNA lincRNA MGP_NODShiLtJ_T0007610.1 MGP_NODShiLtJ_G0006221.1 mouse_genomes_project 3 134964334 134982170 - 1700061I17Rik lincRNA lincRNA MGP_NODShiLtJ_T0004183.1 MGP_NODShiLtJ_G0003675.1 mouse_genomes_project 3 58313023 58322102 + Gm20089 antisense antisense MGP_NODShiLtJ_T0014019.1 MGP_NODShiLtJ_G0012127.1 mouse_genomes_project 3 93598604 93599389 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001106.1 MGP_NODShiLtJ_G0001029.1 mouse_genomes_project 3 32826509 32828584 - TEC TEC MGP_NODShiLtJ_T0001350.1 MGP_NODShiLtJ_G0001270.1 mouse_genomes_project 3 175712121 175713533 - TEC TEC MGP_NODShiLtJ_T0060845.1 MGP_NODShiLtJ_G0027107.1 mouse_genomes_project 3 77605910 77619824 - MGP_NODShiLtJ_P0060845 Trim59 protein_coding protein_coding MGP_NODShiLtJ_T0060846.1 MGP_NODShiLtJ_G0027107.1 mouse_genomes_project 3 77608136 77619784 - MGP_NODShiLtJ_P0060846 Trim59 protein_coding protein_coding MGP_NODShiLtJ_T0060847.1 MGP_NODShiLtJ_G0027107.1 mouse_genomes_project 3 77618546 77619784 - Trim59 protein_coding retained_intron MGP_NODShiLtJ_T0060848.1 MGP_NODShiLtJ_G0027107.1 mouse_genomes_project 3 77618812 77619792 - Trim59 protein_coding processed_transcript MGP_NODShiLtJ_T0004195.1 MGP_NODShiLtJ_G0003684.1 mouse_genomes_project 3 66513704 66525623 + antisense antisense MGP_NODShiLtJ_T0007713.1 MGP_NODShiLtJ_G0006301.1 mouse_genomes_project 3 174533108 174537387 + Gm42949 lincRNA lincRNA MGP_NODShiLtJ_T0001313.1 MGP_NODShiLtJ_G0001233.1 mouse_genomes_project 3 149312809 149316257 + TEC TEC MGP_NODShiLtJ_T0007715.1 MGP_NODShiLtJ_G0006303.1 mouse_genomes_project 3 175273772 175278511 + Gm43619 lincRNA lincRNA MGP_NODShiLtJ_T0007437.1 MGP_NODShiLtJ_G0006090.1 mouse_genomes_project 3 37350458 37368075 - Gm3143 lincRNA lincRNA MGP_NODShiLtJ_T0007438.1 MGP_NODShiLtJ_G0006090.1 mouse_genomes_project 3 37361046 37368077 - Gm3143 lincRNA lincRNA MGP_NODShiLtJ_T0014127.1 MGP_NODShiLtJ_G0012235.1 mouse_genomes_project 3 126367586 126367920 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062009.1 MGP_NODShiLtJ_G0027385.1 mouse_genomes_project 3 109100066 109113526 + MGP_NODShiLtJ_P0062009 Vps72 protein_coding protein_coding MGP_NODShiLtJ_T0062010.1 MGP_NODShiLtJ_G0027385.1 mouse_genomes_project 3 109100086 109107799 + Vps72 protein_coding processed_transcript MGP_NODShiLtJ_T0062011.1 MGP_NODShiLtJ_G0027385.1 mouse_genomes_project 3 109100117 109113196 + Vps72 protein_coding processed_transcript MGP_NODShiLtJ_T0062012.1 MGP_NODShiLtJ_G0027385.1 mouse_genomes_project 3 109103650 109108596 + Vps72 protein_coding processed_transcript MGP_NODShiLtJ_T0062013.1 MGP_NODShiLtJ_G0027385.1 mouse_genomes_project 3 109106200 109108715 + Vps72 protein_coding retained_intron MGP_NODShiLtJ_T0014042.1 MGP_NODShiLtJ_G0012150.1 mouse_genomes_project 3 103910061 103910795 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100476.1 MGP_NODShiLtJ_G0038870.1 mouse_genomes_project 3 110966667 110966803 - Gm22581 snoRNA snoRNA MGP_NODShiLtJ_T0001094.1 MGP_NODShiLtJ_G0001017.1 mouse_genomes_project 3 21731002 21735071 + TEC TEC MGP_NODShiLtJ_T0013848.1 MGP_NODShiLtJ_G0011956.1 mouse_genomes_project 3 28975508 28976673 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001149.1 MGP_NODShiLtJ_G0001072.1 mouse_genomes_project 3 56671524 56676636 - TEC TEC MGP_NODShiLtJ_T0062541.1 MGP_NODShiLtJ_G0027508.1 mouse_genomes_project 3 118146663 118159673 + MGP_NODShiLtJ_P0062541 Bcas2 protein_coding protein_coding MGP_NODShiLtJ_T0062542.1 MGP_NODShiLtJ_G0027508.1 mouse_genomes_project 3 118146711 118153822 + Bcas2 protein_coding retained_intron MGP_NODShiLtJ_T0062543.1 MGP_NODShiLtJ_G0027508.1 mouse_genomes_project 3 118146757 118153824 + Bcas2 protein_coding retained_intron MGP_NODShiLtJ_T0062544.1 MGP_NODShiLtJ_G0027508.1 mouse_genomes_project 3 118146770 118153444 + MGP_NODShiLtJ_P0062544 Bcas2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062545.1 MGP_NODShiLtJ_G0027508.1 mouse_genomes_project 3 118146780 118159687 + MGP_NODShiLtJ_P0062545 Bcas2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062546.1 MGP_NODShiLtJ_G0027508.1 mouse_genomes_project 3 118146793 118149544 + Bcas2 protein_coding retained_intron MGP_NODShiLtJ_T0013831.1 MGP_NODShiLtJ_G0011939.1 mouse_genomes_project 3 20450527 20451578 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100498.1 MGP_NODShiLtJ_G0038892.1 mouse_genomes_project 3 164651569 164651662 + Gm25965 snoRNA snoRNA MGP_NODShiLtJ_T0061648.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103129919 103141712 + MGP_NODShiLtJ_P0061648 4933434E20Rik protein_coding protein_coding MGP_NODShiLtJ_T0061649.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103131090 103143375 + MGP_NODShiLtJ_P0061649 4933434E20Rik protein_coding protein_coding MGP_NODShiLtJ_T0061650.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103131105 103137701 + 4933434E20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0061651.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103131113 103138147 + MGP_NODShiLtJ_P0061651 4933434E20Rik protein_coding protein_coding MGP_NODShiLtJ_T0061652.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103131118 103140271 + MGP_NODShiLtJ_P0061652 4933434E20Rik protein_coding protein_coding MGP_NODShiLtJ_T0061653.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103131130 103132127 + 4933434E20Rik protein_coding retained_intron MGP_NODShiLtJ_T0061654.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103131147 103142479 + MGP_NODShiLtJ_P0061654 4933434E20Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061655.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103131147 103142474 + MGP_NODShiLtJ_P0061655 4933434E20Rik protein_coding protein_coding MGP_NODShiLtJ_T0061656.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103132027 103137917 + 4933434E20Rik protein_coding retained_intron MGP_NODShiLtJ_T0061657.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103137694 103141990 + 4933434E20Rik protein_coding retained_intron MGP_NODShiLtJ_T0061658.1 MGP_NODShiLtJ_G0027267.1 mouse_genomes_project 3 103142829 103148450 + MGP_NODShiLtJ_P0061658 4933434E20Rik protein_coding protein_coding MGP_NODShiLtJ_T0061078.1 MGP_NODShiLtJ_G0027166.1 mouse_genomes_project 3 98442247 98563589 + Sh3d19 protein_coding processed_transcript MGP_NODShiLtJ_T0061080.1 MGP_NODShiLtJ_G0027166.1 mouse_genomes_project 3 98513178 98563345 + Sh3d19 protein_coding processed_transcript MGP_NODShiLtJ_T0061081.1 MGP_NODShiLtJ_G0027166.1 mouse_genomes_project 3 98514916 98563633 + Sh3d19 protein_coding processed_transcript MGP_NODShiLtJ_T0061082.1 MGP_NODShiLtJ_G0027166.1 mouse_genomes_project 3 98515024 98563622 + Sh3d19 protein_coding processed_transcript MGP_NODShiLtJ_T0061083.1 MGP_NODShiLtJ_G0027166.1 mouse_genomes_project 3 98550960 98613512 + MGP_NODShiLtJ_P0061083 Sh3d19 protein_coding protein_coding MGP_NODShiLtJ_T0061084.1 MGP_NODShiLtJ_G0027166.1 mouse_genomes_project 3 98564484 98613508 + MGP_NODShiLtJ_P0061084 Sh3d19 protein_coding protein_coding MGP_NODShiLtJ_T0061085.1 MGP_NODShiLtJ_G0027166.1 mouse_genomes_project 3 98608314 98612096 + Sh3d19 protein_coding retained_intron MGP_NODShiLtJ_T0060662.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67872210 68011201 + MGP_NODShiLtJ_P0060662 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060663.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67872422 68019339 + MGP_NODShiLtJ_P0060663 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060664.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67872448 67874775 + Mbnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060665.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67872454 68038407 + MGP_NODShiLtJ_P0060665 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060666.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67872457 68011186 + MGP_NODShiLtJ_P0060666 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060667.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67896141 67959403 + Mbnl1 protein_coding processed_transcript MGP_NODShiLtJ_T0060668.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67896426 68013538 + Mbnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060669.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67896443 68045519 + Mbnl1 protein_coding processed_transcript MGP_NODShiLtJ_T0060670.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67896471 67959381 + Mbnl1 protein_coding processed_transcript MGP_NODShiLtJ_T0060671.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67896471 67929412 + Mbnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060672.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67896484 68048021 + MGP_NODShiLtJ_P0060672 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060673.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67925901 67926885 + Mbnl1 protein_coding processed_transcript MGP_NODShiLtJ_T0060674.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67926165 68044269 + MGP_NODShiLtJ_P0060674 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060675.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67926824 68048038 + MGP_NODShiLtJ_P0060675 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060676.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67926824 68047475 + MGP_NODShiLtJ_P0060676 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060677.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67927358 68036135 + Mbnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060678.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 67927428 68042130 + Mbnl1 protein_coding processed_transcript MGP_NODShiLtJ_T0060679.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 68011077 68030755 + MGP_NODShiLtJ_P0060679 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060680.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 68011147 68043781 + MGP_NODShiLtJ_P0060680 Mbnl1 protein_coding protein_coding MGP_NODShiLtJ_T0060681.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 68018982 68033126 + Mbnl1 protein_coding retained_intron MGP_NODShiLtJ_T0060682.1 MGP_NODShiLtJ_G0027065.1 mouse_genomes_project 3 68040226 68043497 + Mbnl1 protein_coding retained_intron MGP_NODShiLtJ_T0099167.1 MGP_NODShiLtJ_G0037561.1 mouse_genomes_project 3 59113932 59114039 - Gm22798 snRNA snRNA MGP_NODShiLtJ_T0100435.1 MGP_NODShiLtJ_G0038829.1 mouse_genomes_project 3 14103358 14103483 - Gm23112 snoRNA snoRNA MGP_NODShiLtJ_T0007583.1 MGP_NODShiLtJ_G0006198.1 mouse_genomes_project 3 117235006 117236788 + Gm43242 lincRNA lincRNA MGP_NODShiLtJ_T0013940.1 MGP_NODShiLtJ_G0012048.1 mouse_genomes_project 3 64932928 64934107 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061079.1 MGP_NODShiLtJ_G0027167.1 mouse_genomes_project 3 98465382 98474064 - MGP_NODShiLtJ_P0061079 Prss48 protein_coding protein_coding MGP_NODShiLtJ_T0007442.1 MGP_NODShiLtJ_G0006094.1 mouse_genomes_project 3 39084441 39086775 - Gm43204 lincRNA lincRNA MGP_NODShiLtJ_T0004351.1 MGP_NODShiLtJ_G0003790.1 mouse_genomes_project 3 176329214 176329846 + Gm16231 antisense antisense MGP_NODShiLtJ_T0001338.1 MGP_NODShiLtJ_G0001258.1 mouse_genomes_project 3 163367791 163370034 + TEC TEC MGP_NODShiLtJ_T0098361.1 MGP_NODShiLtJ_G0036766.1 mouse_genomes_project 3 119988428 119990094 - Gm42658 sense_intronic sense_intronic MGP_NODShiLtJ_T0001104.1 MGP_NODShiLtJ_G0001027.1 mouse_genomes_project 3 32582382 32584446 - TEC TEC MGP_NODShiLtJ_T0060621.1 MGP_NODShiLtJ_G0027052.1 mouse_genomes_project 3 65968464 66006686 - MGP_NODShiLtJ_P0060621 Clrn1 protein_coding protein_coding MGP_NODShiLtJ_T0060622.1 MGP_NODShiLtJ_G0027052.1 mouse_genomes_project 3 65969655 66006686 - MGP_NODShiLtJ_P0060622 Clrn1 protein_coding protein_coding MGP_NODShiLtJ_T0060623.1 MGP_NODShiLtJ_G0027052.1 mouse_genomes_project 3 65970421 66006814 - MGP_NODShiLtJ_P0060623 Clrn1 protein_coding protein_coding MGP_NODShiLtJ_T0060624.1 MGP_NODShiLtJ_G0027052.1 mouse_genomes_project 3 65970803 65984585 - Clrn1 protein_coding retained_intron MGP_NODShiLtJ_T0100492.1 MGP_NODShiLtJ_G0038886.1 mouse_genomes_project 3 143482101 143482231 + Gm22900 snoRNA snoRNA MGP_NODShiLtJ_T0101900.1 MGP_NODShiLtJ_G0040068.1 mouse_genomes_project 3 179148886 179149757 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0063681.1 MGP_NODShiLtJ_G0027741.1 mouse_genomes_project 3 159189415 159205045 + MGP_NODShiLtJ_P0063681 Adh7 protein_coding protein_coding MGP_NODShiLtJ_T0063682.1 MGP_NODShiLtJ_G0027741.1 mouse_genomes_project 3 159193103 159194720 + Adh7 protein_coding retained_intron MGP_NODShiLtJ_T0063683.1 MGP_NODShiLtJ_G0027741.1 mouse_genomes_project 3 159199681 159203072 + Adh7 protein_coding processed_transcript MGP_NODShiLtJ_T0063470.1 MGP_NODShiLtJ_G0027699.1 mouse_genomes_project 3 151211237 151333291 + MGP_NODShiLtJ_P0063470 Lef1 protein_coding protein_coding MGP_NODShiLtJ_T0063471.1 MGP_NODShiLtJ_G0027699.1 mouse_genomes_project 3 151211237 151333291 + MGP_NODShiLtJ_P0063471 Lef1 protein_coding protein_coding MGP_NODShiLtJ_T0063472.1 MGP_NODShiLtJ_G0027699.1 mouse_genomes_project 3 151211237 151333291 + MGP_NODShiLtJ_P0063472 Lef1 protein_coding protein_coding MGP_NODShiLtJ_T0063473.1 MGP_NODShiLtJ_G0027699.1 mouse_genomes_project 3 151213577 151218181 + Lef1 protein_coding retained_intron MGP_NODShiLtJ_T0063474.1 MGP_NODShiLtJ_G0027699.1 mouse_genomes_project 3 151213577 151333291 + MGP_NODShiLtJ_P0063474 Lef1 protein_coding protein_coding MGP_NODShiLtJ_T0063475.1 MGP_NODShiLtJ_G0027699.1 mouse_genomes_project 3 151213586 151296594 + Lef1 protein_coding retained_intron MGP_NODShiLtJ_T0063476.1 MGP_NODShiLtJ_G0027699.1 mouse_genomes_project 3 151214594 151293258 + Lef1 protein_coding retained_intron MGP_NODShiLtJ_T0063477.1 MGP_NODShiLtJ_G0027699.1 mouse_genomes_project 3 151214636 151313520 + Lef1 protein_coding processed_transcript MGP_NODShiLtJ_T0007672.1 MGP_NODShiLtJ_G0006271.1 mouse_genomes_project 3 165114293 165133529 + A830019L24Rik lincRNA lincRNA MGP_NODShiLtJ_T0007673.1 MGP_NODShiLtJ_G0006271.1 mouse_genomes_project 3 165114767 165135259 + A830019L24Rik lincRNA lincRNA MGP_NODShiLtJ_T0060801.1 MGP_NODShiLtJ_G0027098.1 mouse_genomes_project 3 76044197 76072921 + MGP_NODShiLtJ_P0060801 Mfsd1 protein_coding protein_coding MGP_NODShiLtJ_T0060802.1 MGP_NODShiLtJ_G0027098.1 mouse_genomes_project 3 76046203 76059241 + Mfsd1 protein_coding processed_transcript MGP_NODShiLtJ_T0004277.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123421754 123430555 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004278.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123423820 123430108 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004279.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123425258 123430140 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004280.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123426651 123430034 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004281.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123426682 123430115 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004282.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123426911 123430151 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004283.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123427010 123430116 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004284.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123427054 123430125 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004285.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123427206 123430131 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004286.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123427260 123430142 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0004287.1 MGP_NODShiLtJ_G0003741.1 mouse_genomes_project 3 123427916 123430154 - 4933431E20Rik antisense antisense MGP_NODShiLtJ_T0062759.1 MGP_NODShiLtJ_G0027558.1 mouse_genomes_project 3 122669489 122685020 + MGP_NODShiLtJ_P0062759 Kcna10 protein_coding protein_coding MGP_NODShiLtJ_T0062760.1 MGP_NODShiLtJ_G0027558.1 mouse_genomes_project 3 122669577 122673766 + Kcna10 protein_coding processed_transcript MGP_NODShiLtJ_T0061798.1 MGP_NODShiLtJ_G0027306.1 mouse_genomes_project 3 105793844 105798382 + MGP_NODShiLtJ_P0061798 protein_coding protein_coding MGP_NODShiLtJ_T0061800.1 MGP_NODShiLtJ_G0027306.1 mouse_genomes_project 3 105796442 105797121 + MGP_NODShiLtJ_P0061800 protein_coding protein_coding MGP_NODShiLtJ_T0004323.1 MGP_NODShiLtJ_G0003771.1 mouse_genomes_project 3 154381532 154714255 - antisense antisense MGP_NODShiLtJ_T0004324.1 MGP_NODShiLtJ_G0003771.1 mouse_genomes_project 3 154613656 154714402 - antisense antisense MGP_NODShiLtJ_T0099220.1 MGP_NODShiLtJ_G0037614.1 mouse_genomes_project 3 142231230 142231360 - Gm22713 snRNA snRNA MGP_NODShiLtJ_T0101874.1 MGP_NODShiLtJ_G0040042.1 mouse_genomes_project 3 103638648 103640870 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0060867.1 MGP_NODShiLtJ_G0027114.1 mouse_genomes_project 3 78708155 78729003 + MGP_NODShiLtJ_P0060867 Otol1 protein_coding protein_coding MGP_NODShiLtJ_T0013861.1 MGP_NODShiLtJ_G0011969.1 mouse_genomes_project 3 36683651 36687386 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001365.1 MGP_NODShiLtJ_G0001285.1 mouse_genomes_project 3 181144010 181145209 - TEC TEC MGP_NODShiLtJ_T0014080.1 MGP_NODShiLtJ_G0012188.1 mouse_genomes_project 3 113367897 113368083 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062970.1 MGP_NODShiLtJ_G0027609.1 mouse_genomes_project 3 124746795 124792957 + MGP_NODShiLtJ_P0062970 Slc25a54 protein_coding protein_coding MGP_NODShiLtJ_T0062971.1 MGP_NODShiLtJ_G0027609.1 mouse_genomes_project 3 124746825 124792852 + MGP_NODShiLtJ_P0062971 Slc25a54 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001318.1 MGP_NODShiLtJ_G0001238.1 mouse_genomes_project 3 150770842 150773195 - TEC TEC MGP_NODShiLtJ_T0063559.1 MGP_NODShiLtJ_G0027718.1 mouse_genomes_project 3 155979336 156014727 + MGP_NODShiLtJ_P0063559 Slc9b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063560.1 MGP_NODShiLtJ_G0027718.1 mouse_genomes_project 3 155979367 155996489 + Slc9b2 protein_coding retained_intron MGP_NODShiLtJ_T0063561.1 MGP_NODShiLtJ_G0027718.1 mouse_genomes_project 3 155979378 155990021 + MGP_NODShiLtJ_P0063561 Slc9b2 protein_coding protein_coding MGP_NODShiLtJ_T0063562.1 MGP_NODShiLtJ_G0027718.1 mouse_genomes_project 3 155979381 156017401 + MGP_NODShiLtJ_P0063562 Slc9b2 protein_coding protein_coding MGP_NODShiLtJ_T0063563.1 MGP_NODShiLtJ_G0027718.1 mouse_genomes_project 3 156001960 156014959 + Slc9b2 protein_coding retained_intron MGP_NODShiLtJ_T0099237.1 MGP_NODShiLtJ_G0037631.1 mouse_genomes_project 3 181174044 181174151 - Gm23725 snRNA snRNA MGP_NODShiLtJ_T0060733.1 MGP_NODShiLtJ_G0027080.1 mouse_genomes_project 3 72280541 72322877 - MGP_NODShiLtJ_P0060733 Vmn2r3 protein_coding protein_coding MGP_NODShiLtJ_T0060734.1 MGP_NODShiLtJ_G0027080.1 mouse_genomes_project 3 72280541 72322799 - MGP_NODShiLtJ_P0060734 Vmn2r3 protein_coding protein_coding MGP_NODShiLtJ_T0063492.1 MGP_NODShiLtJ_G0027704.1 mouse_genomes_project 3 152185072 152288044 + MGP_NODShiLtJ_P0063492 Dkk2 protein_coding protein_coding MGP_NODShiLtJ_T0101850.1 MGP_NODShiLtJ_G0040018.1 mouse_genomes_project 3 596243 596671 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013965.1 MGP_NODShiLtJ_G0012073.1 mouse_genomes_project 3 73857774 73858581 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060568.1 MGP_NODShiLtJ_G0027038.1 mouse_genomes_project 3 62484194 62490119 + MGP_NODShiLtJ_P0060568 Mab21l1 protein_coding protein_coding MGP_NODShiLtJ_T0001301.1 MGP_NODShiLtJ_G0001222.1 mouse_genomes_project 3 146872313 146875513 - TEC TEC MGP_NODShiLtJ_T0060851.1 MGP_NODShiLtJ_G0027109.1 mouse_genomes_project 3 77821449 77822649 + MGP_NODShiLtJ_P0060851 Arl14 protein_coding protein_coding MGP_NODShiLtJ_T0062791.1 MGP_NODShiLtJ_G0027570.1 mouse_genomes_project 3 123153690 123155390 + MGP_NODShiLtJ_P0062791 Gm10961 protein_coding protein_coding MGP_NODShiLtJ_T0059804.1 MGP_NODShiLtJ_G0026898.1 mouse_genomes_project 3 15970960 16057853 - MGP_NODShiLtJ_P0059804 Gm5150 protein_coding protein_coding MGP_NODShiLtJ_T0059805.1 MGP_NODShiLtJ_G0026898.1 mouse_genomes_project 3 15972160 16057748 - MGP_NODShiLtJ_P0059805 Gm5150 protein_coding protein_coding MGP_NODShiLtJ_T0060046.1 MGP_NODShiLtJ_G0026948.1 mouse_genomes_project 3 34336683 34646510 + MGP_NODShiLtJ_P0060046 Kcnmb2 protein_coding protein_coding MGP_NODShiLtJ_T0060047.1 MGP_NODShiLtJ_G0026948.1 mouse_genomes_project 3 34604164 34645102 + MGP_NODShiLtJ_P0060047 Kcnmb2 protein_coding protein_coding MGP_NODShiLtJ_T0100437.1 MGP_NODShiLtJ_G0038831.1 mouse_genomes_project 3 23418121 23418250 - Gm26354 snoRNA snoRNA MGP_NODShiLtJ_T0014058.1 MGP_NODShiLtJ_G0012166.1 mouse_genomes_project 3 107140708 107141260 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013781.1 MGP_NODShiLtJ_G0011889.1 mouse_genomes_project 3 4825779 4826125 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063507.1 MGP_NODShiLtJ_G0027708.1 mouse_genomes_project 3 153133113 153208360 - MGP_NODShiLtJ_P0063507 Npnt protein_coding protein_coding MGP_NODShiLtJ_T0063508.1 MGP_NODShiLtJ_G0027708.1 mouse_genomes_project 3 153133130 153208112 - MGP_NODShiLtJ_P0063508 Npnt protein_coding protein_coding MGP_NODShiLtJ_T0063509.1 MGP_NODShiLtJ_G0027708.1 mouse_genomes_project 3 153134051 153208229 - MGP_NODShiLtJ_P0063509 Npnt protein_coding protein_coding MGP_NODShiLtJ_T0063510.1 MGP_NODShiLtJ_G0027708.1 mouse_genomes_project 3 153135798 153208112 - MGP_NODShiLtJ_P0063510 Npnt protein_coding protein_coding MGP_NODShiLtJ_T0063511.1 MGP_NODShiLtJ_G0027708.1 mouse_genomes_project 3 153135798 153208112 - MGP_NODShiLtJ_P0063511 Npnt protein_coding protein_coding MGP_NODShiLtJ_T0063512.1 MGP_NODShiLtJ_G0027708.1 mouse_genomes_project 3 153142538 153157718 - Npnt protein_coding retained_intron MGP_NODShiLtJ_T0099160.1 MGP_NODShiLtJ_G0037554.1 mouse_genomes_project 3 42841140 42841300 + Gm23796 snRNA snRNA MGP_NODShiLtJ_T0010401.1 MGP_NODShiLtJ_G0008534.1 mouse_genomes_project 3 31620185 31620283 + Mir551b miRNA miRNA MGP_NODShiLtJ_T0101877.1 MGP_NODShiLtJ_G0040045.1 mouse_genomes_project 3 106729483 106729708 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010452.1 MGP_NODShiLtJ_G0008585.1 mouse_genomes_project 3 147207696 147207762 + Mir302d miRNA miRNA MGP_NODShiLtJ_T0060453.1 MGP_NODShiLtJ_G0027016.1 mouse_genomes_project 3 59463132 59686694 + MGP_NODShiLtJ_P0060453 Lhfp protein_coding protein_coding MGP_NODShiLtJ_T0060454.1 MGP_NODShiLtJ_G0027016.1 mouse_genomes_project 3 59463163 59686690 + Lhfp protein_coding processed_transcript MGP_NODShiLtJ_T0060455.1 MGP_NODShiLtJ_G0027016.1 mouse_genomes_project 3 59463187 59686694 + MGP_NODShiLtJ_P0060455 Lhfp protein_coding protein_coding MGP_NODShiLtJ_T0060456.1 MGP_NODShiLtJ_G0027016.1 mouse_genomes_project 3 59652724 59655813 + Lhfp protein_coding retained_intron MGP_NODShiLtJ_T0060082.1 MGP_NODShiLtJ_G0026955.1 mouse_genomes_project 3 35188258 35201464 + MGP_NODShiLtJ_P0060082 Actl6a protein_coding protein_coding MGP_NODShiLtJ_T0060083.1 MGP_NODShiLtJ_G0026955.1 mouse_genomes_project 3 35190467 35209824 + MGP_NODShiLtJ_P0060083 Actl6a protein_coding protein_coding MGP_NODShiLtJ_T0060084.1 MGP_NODShiLtJ_G0026955.1 mouse_genomes_project 3 35190510 35191967 + Actl6a protein_coding retained_intron MGP_NODShiLtJ_T0060085.1 MGP_NODShiLtJ_G0026955.1 mouse_genomes_project 3 35190725 35201458 + MGP_NODShiLtJ_P0060085 Actl6a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060086.1 MGP_NODShiLtJ_G0026955.1 mouse_genomes_project 3 35191124 35201507 + MGP_NODShiLtJ_P0060086 Actl6a protein_coding protein_coding MGP_NODShiLtJ_T0060087.1 MGP_NODShiLtJ_G0026955.1 mouse_genomes_project 3 35193343 35194131 + Actl6a protein_coding retained_intron MGP_NODShiLtJ_T0060088.1 MGP_NODShiLtJ_G0026955.1 mouse_genomes_project 3 35194132 35209624 + MGP_NODShiLtJ_P0060088 Actl6a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060089.1 MGP_NODShiLtJ_G0026955.1 mouse_genomes_project 3 35201417 35209819 + Actl6a protein_coding retained_intron MGP_NODShiLtJ_T0001352.1 MGP_NODShiLtJ_G0001272.1 mouse_genomes_project 3 175720347 175723426 - TEC TEC MGP_NODShiLtJ_T0060429.1 MGP_NODShiLtJ_G0027010.1 mouse_genomes_project 3 57783450 57793675 + Rab33b protein_coding processed_transcript MGP_NODShiLtJ_T0060430.1 MGP_NODShiLtJ_G0027010.1 mouse_genomes_project 3 57783460 57784057 + MGP_NODShiLtJ_P0060430 Rab33b protein_coding protein_coding MGP_NODShiLtJ_T0060431.1 MGP_NODShiLtJ_G0027010.1 mouse_genomes_project 3 57783496 57795724 + MGP_NODShiLtJ_P0060431 Rab33b protein_coding protein_coding MGP_NODShiLtJ_T0007528.1 MGP_NODShiLtJ_G0006159.1 mouse_genomes_project 3 95160513 95246536 - Gm30097 lincRNA lincRNA MGP_NODShiLtJ_T0007529.1 MGP_NODShiLtJ_G0006159.1 mouse_genomes_project 3 95160615 95231551 - Gm30097 lincRNA lincRNA MGP_NODShiLtJ_T0004209.1 MGP_NODShiLtJ_G0003696.1 mouse_genomes_project 3 92977976 92981003 - Gm16000 antisense antisense MGP_NODShiLtJ_T0063290.1 MGP_NODShiLtJ_G0027672.1 mouse_genomes_project 3 145901436 145984059 + MGP_NODShiLtJ_P0063290 Arsj protein_coding protein_coding MGP_NODShiLtJ_T0013939.1 MGP_NODShiLtJ_G0012047.1 mouse_genomes_project 3 64912804 64913038 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063589.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156169586 156269816 + MGP_NODShiLtJ_P0063589 Manba protein_coding protein_coding MGP_NODShiLtJ_T0063590.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156169586 156253026 + MGP_NODShiLtJ_P0063590 Manba protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063591.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156169594 156252986 + Manba protein_coding retained_intron MGP_NODShiLtJ_T0063592.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156169600 156202075 + Manba protein_coding retained_intron MGP_NODShiLtJ_T0063593.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156206411 156235648 + Manba protein_coding processed_transcript MGP_NODShiLtJ_T0063594.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156212257 156213882 + Manba protein_coding processed_transcript MGP_NODShiLtJ_T0063595.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156238793 156246260 + Manba protein_coding retained_intron MGP_NODShiLtJ_T0063596.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156243861 156252228 + Manba protein_coding processed_transcript MGP_NODShiLtJ_T0063597.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156245668 156255309 + Manba protein_coding processed_transcript MGP_NODShiLtJ_T0063598.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156245739 156261761 + Manba protein_coding processed_transcript MGP_NODShiLtJ_T0063599.1 MGP_NODShiLtJ_G0027722.1 mouse_genomes_project 3 156261721 156265965 + Manba protein_coding processed_transcript MGP_NODShiLtJ_T0060700.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71121381 71216053 + MGP_NODShiLtJ_P0060700 Mme protein_coding protein_coding MGP_NODShiLtJ_T0060701.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71182593 71216422 + MGP_NODShiLtJ_P0060701 Mme protein_coding protein_coding MGP_NODShiLtJ_T0060702.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71182775 71216414 + MGP_NODShiLtJ_P0060702 Mme protein_coding protein_coding MGP_NODShiLtJ_T0060703.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71182888 71283610 + MGP_NODShiLtJ_P0060703 Mme protein_coding protein_coding MGP_NODShiLtJ_T0060704.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71183199 71288852 + MGP_NODShiLtJ_P0060704 Mme protein_coding protein_coding MGP_NODShiLtJ_T0060705.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71183379 71282846 + MGP_NODShiLtJ_P0060705 Mme protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060706.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71183422 71284137 + MGP_NODShiLtJ_P0060706 Mme protein_coding protein_coding MGP_NODShiLtJ_T0060707.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71184379 71216294 + MGP_NODShiLtJ_P0060707 Mme protein_coding protein_coding MGP_NODShiLtJ_T0060708.1 MGP_NODShiLtJ_G0027072.1 mouse_genomes_project 3 71188401 71233150 + Mme protein_coding retained_intron MGP_NODShiLtJ_T0063693.1 MGP_NODShiLtJ_G0027745.1 mouse_genomes_project 3 159465420 159477574 + MGP_NODShiLtJ_P0063693 Adh5 protein_coding protein_coding MGP_NODShiLtJ_T0063694.1 MGP_NODShiLtJ_G0027745.1 mouse_genomes_project 3 159465438 159468272 + Adh5 protein_coding retained_intron MGP_NODShiLtJ_T0063695.1 MGP_NODShiLtJ_G0027745.1 mouse_genomes_project 3 159465439 159469160 + Adh5 protein_coding retained_intron MGP_NODShiLtJ_T0063696.1 MGP_NODShiLtJ_G0027745.1 mouse_genomes_project 3 159465497 159467727 + Adh5 protein_coding retained_intron MGP_NODShiLtJ_T0063697.1 MGP_NODShiLtJ_G0027745.1 mouse_genomes_project 3 159465497 159470263 + MGP_NODShiLtJ_P0063697 Adh5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063698.1 MGP_NODShiLtJ_G0027745.1 mouse_genomes_project 3 159465508 159476878 + MGP_NODShiLtJ_P0063698 Adh5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063699.1 MGP_NODShiLtJ_G0027745.1 mouse_genomes_project 3 159476479 159477318 + Adh5 protein_coding retained_intron MGP_NODShiLtJ_T0013853.1 MGP_NODShiLtJ_G0011961.1 mouse_genomes_project 3 32201152 32201591 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063225.1 MGP_NODShiLtJ_G0027658.1 mouse_genomes_project 3 141682383 141688672 - MGP_NODShiLtJ_P0063225 Gm10959 protein_coding protein_coding MGP_NODShiLtJ_T0013779.1 MGP_NODShiLtJ_G0011887.1 mouse_genomes_project 3 4452175 4453157 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007516.1 MGP_NODShiLtJ_G0006149.1 mouse_genomes_project 3 86763319 86828267 + Gm37256 lincRNA lincRNA MGP_NODShiLtJ_T0060984.1 MGP_NODShiLtJ_G0027142.1 mouse_genomes_project 3 94516132 94541815 + MGP_NODShiLtJ_P0060984 Map9 protein_coding protein_coding MGP_NODShiLtJ_T0060985.1 MGP_NODShiLtJ_G0027142.1 mouse_genomes_project 3 94516160 94535769 + MGP_NODShiLtJ_P0060985 Map9 protein_coding protein_coding MGP_NODShiLtJ_T0060986.1 MGP_NODShiLtJ_G0027142.1 mouse_genomes_project 3 94516160 94554186 + MGP_NODShiLtJ_P0060986 Map9 protein_coding protein_coding MGP_NODShiLtJ_T0060987.1 MGP_NODShiLtJ_G0027142.1 mouse_genomes_project 3 94516258 94541751 + MGP_NODShiLtJ_P0060987 Map9 protein_coding protein_coding MGP_NODShiLtJ_T0060988.1 MGP_NODShiLtJ_G0027142.1 mouse_genomes_project 3 94516275 94554186 + MGP_NODShiLtJ_P0060988 Map9 protein_coding protein_coding MGP_NODShiLtJ_T0060989.1 MGP_NODShiLtJ_G0027142.1 mouse_genomes_project 3 94536519 94540159 + Map9 protein_coding retained_intron MGP_NODShiLtJ_T0060990.1 MGP_NODShiLtJ_G0027142.1 mouse_genomes_project 3 94536880 94541533 + MGP_NODShiLtJ_P0060990 Map9 protein_coding protein_coding MGP_NODShiLtJ_T0007439.1 MGP_NODShiLtJ_G0006091.1 mouse_genomes_project 3 37450871 37470045 + lincRNA lincRNA MGP_NODShiLtJ_T0061700.1 MGP_NODShiLtJ_G0027276.1 mouse_genomes_project 3 103403648 103419449 + MGP_NODShiLtJ_P0061700 Dennd4b protein_coding protein_coding MGP_NODShiLtJ_T0061701.1 MGP_NODShiLtJ_G0027276.1 mouse_genomes_project 3 103405131 103419449 + MGP_NODShiLtJ_P0061701 Dennd4b protein_coding protein_coding MGP_NODShiLtJ_T0061702.1 MGP_NODShiLtJ_G0027276.1 mouse_genomes_project 3 103406078 103414265 + MGP_NODShiLtJ_P0061702 Dennd4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061703.1 MGP_NODShiLtJ_G0027276.1 mouse_genomes_project 3 103407633 103410315 + MGP_NODShiLtJ_P0061703 Dennd4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061704.1 MGP_NODShiLtJ_G0027276.1 mouse_genomes_project 3 103414082 103416258 + MGP_NODShiLtJ_P0061704 Dennd4b protein_coding protein_coding MGP_NODShiLtJ_T0061705.1 MGP_NODShiLtJ_G0027276.1 mouse_genomes_project 3 103416182 103417123 + Dennd4b protein_coding retained_intron MGP_NODShiLtJ_T0061706.1 MGP_NODShiLtJ_G0027276.1 mouse_genomes_project 3 103416787 103417450 + Dennd4b protein_coding retained_intron MGP_NODShiLtJ_T0013769.1 MGP_NODShiLtJ_G0011877.1 mouse_genomes_project 3 895019 895335 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063855.1 MGP_NODShiLtJ_G0027777.1 mouse_genomes_project 3 167860181 167863190 - MGP_NODShiLtJ_P0063855 Cyr61 protein_coding protein_coding MGP_NODShiLtJ_T0001344.1 MGP_NODShiLtJ_G0001264.1 mouse_genomes_project 3 174216981 174223266 - TEC TEC MGP_NODShiLtJ_T0063226.1 MGP_NODShiLtJ_G0027659.1 mouse_genomes_project 3 141693514 141698342 + MGP_NODShiLtJ_P0063226 1810037I17Rik protein_coding protein_coding MGP_NODShiLtJ_T0001296.1 MGP_NODShiLtJ_G0001217.1 mouse_genomes_project 3 146599858 146600751 - TEC TEC MGP_NODShiLtJ_T0001341.1 MGP_NODShiLtJ_G0001261.1 mouse_genomes_project 3 169767164 169771672 - TEC TEC MGP_NODShiLtJ_T0064144.1 MGP_NODShiLtJ_G0027825.1 mouse_genomes_project 3 180424116 181276057 + MGP_NODShiLtJ_P0064144 Negr1 protein_coding protein_coding MGP_NODShiLtJ_T0064145.1 MGP_NODShiLtJ_G0027825.1 mouse_genomes_project 3 180424281 181106852 + MGP_NODShiLtJ_P0064145 Negr1 protein_coding protein_coding MGP_NODShiLtJ_T0064146.1 MGP_NODShiLtJ_G0027825.1 mouse_genomes_project 3 180424291 181135257 + MGP_NODShiLtJ_P0064146 Negr1 protein_coding protein_coding MGP_NODShiLtJ_T0064147.1 MGP_NODShiLtJ_G0027825.1 mouse_genomes_project 3 180424468 180435295 + Negr1 protein_coding retained_intron MGP_NODShiLtJ_T0064148.1 MGP_NODShiLtJ_G0027825.1 mouse_genomes_project 3 180424472 180944158 + MGP_NODShiLtJ_P0064148 Negr1 protein_coding protein_coding MGP_NODShiLtJ_T0061417.1 MGP_NODShiLtJ_G0027231.1 mouse_genomes_project 3 102106777 102118697 + MGP_NODShiLtJ_P0061417 Pklr protein_coding protein_coding MGP_NODShiLtJ_T0061418.1 MGP_NODShiLtJ_G0027231.1 mouse_genomes_project 3 102106809 102108095 + Pklr protein_coding processed_transcript MGP_NODShiLtJ_T0061419.1 MGP_NODShiLtJ_G0027231.1 mouse_genomes_project 3 102107207 102118882 + MGP_NODShiLtJ_P0061419 Pklr protein_coding protein_coding MGP_NODShiLtJ_T0061420.1 MGP_NODShiLtJ_G0027231.1 mouse_genomes_project 3 102107214 102113642 + MGP_NODShiLtJ_P0061420 Pklr protein_coding protein_coding MGP_NODShiLtJ_T0061421.1 MGP_NODShiLtJ_G0027231.1 mouse_genomes_project 3 102107258 102113015 + Pklr protein_coding processed_transcript MGP_NODShiLtJ_T0060290.1 MGP_NODShiLtJ_G0026990.1 mouse_genomes_project 3 43783423 43809180 + MGP_NODShiLtJ_P0060290 Intu protein_coding protein_coding MGP_NODShiLtJ_T0060291.1 MGP_NODShiLtJ_G0026990.1 mouse_genomes_project 3 43794674 43869660 + MGP_NODShiLtJ_P0060291 Intu protein_coding protein_coding MGP_NODShiLtJ_T0060292.1 MGP_NODShiLtJ_G0026990.1 mouse_genomes_project 3 43832872 43854780 + MGP_NODShiLtJ_P0060292 Intu protein_coding protein_coding MGP_NODShiLtJ_T0099231.1 MGP_NODShiLtJ_G0037625.1 mouse_genomes_project 3 164624181 164624286 - Gm24457 snRNA snRNA MGP_NODShiLtJ_T0062938.1 MGP_NODShiLtJ_G0027603.1 mouse_genomes_project 3 124423817 124486741 - MGP_NODShiLtJ_P0062938 Stxbp3 protein_coding protein_coding MGP_NODShiLtJ_T0062939.1 MGP_NODShiLtJ_G0027603.1 mouse_genomes_project 3 124425069 124434490 - Stxbp3 protein_coding retained_intron MGP_NODShiLtJ_T0062940.1 MGP_NODShiLtJ_G0027603.1 mouse_genomes_project 3 124425513 124429740 - Stxbp3 protein_coding retained_intron MGP_NODShiLtJ_T0062941.1 MGP_NODShiLtJ_G0027603.1 mouse_genomes_project 3 124432067 124437687 - Stxbp3 protein_coding retained_intron MGP_NODShiLtJ_T0062942.1 MGP_NODShiLtJ_G0027603.1 mouse_genomes_project 3 124442127 124486681 - MGP_NODShiLtJ_P0062942 Stxbp3 protein_coding protein_coding MGP_NODShiLtJ_T0062943.1 MGP_NODShiLtJ_G0027603.1 mouse_genomes_project 3 124454988 124486745 - Stxbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0062944.1 MGP_NODShiLtJ_G0027603.1 mouse_genomes_project 3 124457718 124486756 - MGP_NODShiLtJ_P0062944 Stxbp3 protein_coding protein_coding MGP_NODShiLtJ_T0062945.1 MGP_NODShiLtJ_G0027603.1 mouse_genomes_project 3 124460083 124486740 - MGP_NODShiLtJ_P0062945 Stxbp3 protein_coding protein_coding MGP_NODShiLtJ_T0007635.1 MGP_NODShiLtJ_G0006239.1 mouse_genomes_project 3 148965727 148968467 - Gm28543 lincRNA lincRNA MGP_NODShiLtJ_T0060283.1 MGP_NODShiLtJ_G0026987.1 mouse_genomes_project 3 40713528 40719640 - protein_coding processed_transcript MGP_NODShiLtJ_T0062352.1 MGP_NODShiLtJ_G0027459.1 mouse_genomes_project 3 111982994 112015558 + MGP_NODShiLtJ_P0062352 Fmo5 protein_coding protein_coding MGP_NODShiLtJ_T0062353.1 MGP_NODShiLtJ_G0027459.1 mouse_genomes_project 3 111983028 112006734 + MGP_NODShiLtJ_P0062353 Fmo5 protein_coding protein_coding MGP_NODShiLtJ_T0062354.1 MGP_NODShiLtJ_G0027459.1 mouse_genomes_project 3 111983038 111984098 + Fmo5 protein_coding retained_intron MGP_NODShiLtJ_T0062355.1 MGP_NODShiLtJ_G0027459.1 mouse_genomes_project 3 111983047 112006784 + MGP_NODShiLtJ_P0062355 Fmo5 protein_coding protein_coding MGP_NODShiLtJ_T0062356.1 MGP_NODShiLtJ_G0027459.1 mouse_genomes_project 3 111983073 111993191 + Fmo5 protein_coding processed_transcript MGP_NODShiLtJ_T0013844.1 MGP_NODShiLtJ_G0011952.1 mouse_genomes_project 3 26582290 26582573 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060655.1 MGP_NODShiLtJ_G0027061.1 mouse_genomes_project 3 67067715 67087430 + protein_coding unprocessed_pseudogene MGP_NODShiLtJ_T0064054.1 MGP_NODShiLtJ_G0027809.1 mouse_genomes_project 3 175799036 176038183 - MGP_NODShiLtJ_P0064054 Ak5 protein_coding protein_coding MGP_NODShiLtJ_T0064055.1 MGP_NODShiLtJ_G0027809.1 mouse_genomes_project 3 175800084 175872887 - MGP_NODShiLtJ_P0064055 Ak5 protein_coding protein_coding MGP_NODShiLtJ_T0064056.1 MGP_NODShiLtJ_G0027809.1 mouse_genomes_project 3 175813260 175819003 - Ak5 protein_coding retained_intron MGP_NODShiLtJ_T0014072.1 MGP_NODShiLtJ_G0012180.1 mouse_genomes_project 3 110227943 110228129 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100464.1 MGP_NODShiLtJ_G0038858.1 mouse_genomes_project 3 98582843 98582965 + Gm25188 snoRNA snoRNA MGP_NODShiLtJ_T0001131.1 MGP_NODShiLtJ_G0001054.1 mouse_genomes_project 3 40704205 40707245 + TEC TEC MGP_NODShiLtJ_T0001176.1 MGP_NODShiLtJ_G0001097.1 mouse_genomes_project 3 58334544 58337833 - TEC TEC MGP_NODShiLtJ_T0101331.1 MGP_NODShiLtJ_G0039573.1 mouse_genomes_project 3 44047849 44049111 + transcribed_unprocessed_pseudogene retained_intron MGP_NODShiLtJ_T0101332.1 MGP_NODShiLtJ_G0039573.1 mouse_genomes_project 3 44048031 44071736 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0061322.1 MGP_NODShiLtJ_G0027218.1 mouse_genomes_project 3 101424871 101435294 + MGP_NODShiLtJ_P0061322 Ssr2 protein_coding protein_coding MGP_NODShiLtJ_T0061323.1 MGP_NODShiLtJ_G0027218.1 mouse_genomes_project 3 101424934 101430390 + MGP_NODShiLtJ_P0061323 Ssr2 protein_coding protein_coding MGP_NODShiLtJ_T0061324.1 MGP_NODShiLtJ_G0027218.1 mouse_genomes_project 3 101424944 101430383 + MGP_NODShiLtJ_P0061324 Ssr2 protein_coding protein_coding MGP_NODShiLtJ_T0061325.1 MGP_NODShiLtJ_G0027218.1 mouse_genomes_project 3 101430014 101440786 + MGP_NODShiLtJ_P0061325 Ssr2 protein_coding protein_coding MGP_NODShiLtJ_T0061326.1 MGP_NODShiLtJ_G0027218.1 mouse_genomes_project 3 101430047 101440386 + MGP_NODShiLtJ_P0061326 Ssr2 protein_coding protein_coding MGP_NODShiLtJ_T0061327.1 MGP_NODShiLtJ_G0027218.1 mouse_genomes_project 3 101430073 101440400 + MGP_NODShiLtJ_P0061327 Ssr2 protein_coding protein_coding MGP_NODShiLtJ_T0061328.1 MGP_NODShiLtJ_G0027218.1 mouse_genomes_project 3 101430077 101440786 + MGP_NODShiLtJ_P0061328 Ssr2 protein_coding protein_coding MGP_NODShiLtJ_T0007570.1 MGP_NODShiLtJ_G0006187.1 mouse_genomes_project 3 112273285 112282085 - Gm15999 lincRNA lincRNA MGP_NODShiLtJ_T0063161.1 MGP_NODShiLtJ_G0027646.1 mouse_genomes_project 3 140099518 140100902 - Slc44a3 protein_coding processed_transcript MGP_NODShiLtJ_T0063162.1 MGP_NODShiLtJ_G0027646.1 mouse_genomes_project 3 140099518 140174868 - MGP_NODShiLtJ_P0063162 Slc44a3 protein_coding protein_coding MGP_NODShiLtJ_T0063163.1 MGP_NODShiLtJ_G0027646.1 mouse_genomes_project 3 140162017 140169579 - Slc44a3 protein_coding processed_transcript MGP_NODShiLtJ_T0060341.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44813087 44876087 + MGP_NODShiLtJ_P0060341 Jade1 protein_coding protein_coding MGP_NODShiLtJ_T0060342.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44813097 44852020 + MGP_NODShiLtJ_P0060342 Jade1 protein_coding protein_coding MGP_NODShiLtJ_T0060343.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44813116 44854859 + MGP_NODShiLtJ_P0060343 Jade1 protein_coding protein_coding MGP_NODShiLtJ_T0060344.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44820589 44876081 + MGP_NODShiLtJ_P0060344 Jade1 protein_coding protein_coding MGP_NODShiLtJ_T0060345.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44820631 44849973 + Jade1 protein_coding processed_transcript MGP_NODShiLtJ_T0060346.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44820827 44873264 + MGP_NODShiLtJ_P0060346 Jade1 protein_coding protein_coding MGP_NODShiLtJ_T0060347.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44823109 44875318 + MGP_NODShiLtJ_P0060347 Jade1 protein_coding protein_coding MGP_NODShiLtJ_T0060348.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44823137 44849971 + Jade1 protein_coding processed_transcript MGP_NODShiLtJ_T0060349.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44823159 44865901 + MGP_NODShiLtJ_P0060349 Jade1 protein_coding protein_coding MGP_NODShiLtJ_T0060350.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44839093 44847242 + Jade1 protein_coding retained_intron MGP_NODShiLtJ_T0060351.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44849911 44858410 + Jade1 protein_coding retained_intron MGP_NODShiLtJ_T0060352.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44852011 44863770 + Jade1 protein_coding retained_intron MGP_NODShiLtJ_T0060353.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44854905 44864006 + MGP_NODShiLtJ_P0060353 Jade1 protein_coding protein_coding MGP_NODShiLtJ_T0060354.1 MGP_NODShiLtJ_G0026998.1 mouse_genomes_project 3 44861635 44864013 + Jade1 protein_coding processed_transcript MGP_NODShiLtJ_T0007551.1 MGP_NODShiLtJ_G0006171.1 mouse_genomes_project 3 102790686 102796518 - 4632404H12Rik lincRNA lincRNA MGP_NODShiLtJ_T0007552.1 MGP_NODShiLtJ_G0006171.1 mouse_genomes_project 3 102791296 102796069 - 4632404H12Rik lincRNA lincRNA MGP_NODShiLtJ_T0001373.1 MGP_NODShiLtJ_G0001293.1 mouse_genomes_project 3 184235849 184238239 + TEC TEC MGP_NODShiLtJ_T0062953.1 MGP_NODShiLtJ_G0027605.1 mouse_genomes_project 3 124563220 124572089 - MGP_NODShiLtJ_P0062953 Prpf38b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062954.1 MGP_NODShiLtJ_G0027605.1 mouse_genomes_project 3 124563222 124572120 - MGP_NODShiLtJ_P0062954 Prpf38b protein_coding protein_coding MGP_NODShiLtJ_T0062955.1 MGP_NODShiLtJ_G0027605.1 mouse_genomes_project 3 124563562 124571861 - MGP_NODShiLtJ_P0062955 Prpf38b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062956.1 MGP_NODShiLtJ_G0027605.1 mouse_genomes_project 3 124564676 124566001 - Prpf38b protein_coding retained_intron MGP_NODShiLtJ_T0062957.1 MGP_NODShiLtJ_G0027605.1 mouse_genomes_project 3 124564891 124566534 - Prpf38b protein_coding processed_transcript MGP_NODShiLtJ_T0062958.1 MGP_NODShiLtJ_G0027605.1 mouse_genomes_project 3 124565036 124568374 - Prpf38b protein_coding processed_transcript MGP_NODShiLtJ_T0062959.1 MGP_NODShiLtJ_G0027605.1 mouse_genomes_project 3 124566976 124572103 - Prpf38b protein_coding retained_intron MGP_NODShiLtJ_T0062960.1 MGP_NODShiLtJ_G0027605.1 mouse_genomes_project 3 124566979 124571022 - Prpf38b protein_coding retained_intron MGP_NODShiLtJ_T0061905.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108372166 108380317 + MGP_NODShiLtJ_P0061905 Celf3 protein_coding protein_coding MGP_NODShiLtJ_T0061906.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108373484 108388951 + MGP_NODShiLtJ_P0061906 Celf3 protein_coding protein_coding MGP_NODShiLtJ_T0061907.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108373821 108388946 + MGP_NODShiLtJ_P0061907 Celf3 protein_coding protein_coding MGP_NODShiLtJ_T0061908.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108374068 108388947 + MGP_NODShiLtJ_P0061908 Celf3 protein_coding protein_coding MGP_NODShiLtJ_T0061909.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108374097 108384265 + MGP_NODShiLtJ_P0061909 Celf3 protein_coding protein_coding MGP_NODShiLtJ_T0061910.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108374107 108382564 + Celf3 protein_coding retained_intron MGP_NODShiLtJ_T0061911.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108377543 108382207 + Celf3 protein_coding processed_transcript MGP_NODShiLtJ_T0061912.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108377710 108388946 + Celf3 protein_coding processed_transcript MGP_NODShiLtJ_T0061913.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108379325 108388946 + Celf3 protein_coding retained_intron MGP_NODShiLtJ_T0061914.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108379362 108381935 + MGP_NODShiLtJ_P0061914 Celf3 protein_coding protein_coding MGP_NODShiLtJ_T0061915.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108379369 108382280 + MGP_NODShiLtJ_P0061915 Celf3 protein_coding protein_coding MGP_NODShiLtJ_T0061916.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108380275 108388935 + Celf3 protein_coding retained_intron MGP_NODShiLtJ_T0061917.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108381641 108383607 + Celf3 protein_coding retained_intron MGP_NODShiLtJ_T0061918.1 MGP_NODShiLtJ_G0027371.1 mouse_genomes_project 3 108382197 108386369 + Celf3 protein_coding retained_intron MGP_NODShiLtJ_T0013898.1 MGP_NODShiLtJ_G0012006.1 mouse_genomes_project 3 48977463 48977845 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013815.1 MGP_NODShiLtJ_G0011923.1 mouse_genomes_project 3 14719384 14719603 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010398.1 MGP_NODShiLtJ_G0008531.1 mouse_genomes_project 3 28948713 28948836 - Gm44464 miRNA miRNA MGP_NODShiLtJ_T0004320.1 MGP_NODShiLtJ_G0003768.1 mouse_genomes_project 3 151210058 151212871 - Gm43352 antisense antisense MGP_NODShiLtJ_T0014135.1 MGP_NODShiLtJ_G0012243.1 mouse_genomes_project 3 129886677 129890173 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061715.1 MGP_NODShiLtJ_G0027278.1 mouse_genomes_project 3 103541301 103546927 - Slc27a3 protein_coding retained_intron MGP_NODShiLtJ_T0061716.1 MGP_NODShiLtJ_G0027278.1 mouse_genomes_project 3 103541301 103546916 - MGP_NODShiLtJ_P0061716 Slc27a3 protein_coding protein_coding MGP_NODShiLtJ_T0061717.1 MGP_NODShiLtJ_G0027278.1 mouse_genomes_project 3 103541303 103546653 - MGP_NODShiLtJ_P0061717 Slc27a3 protein_coding protein_coding MGP_NODShiLtJ_T0061718.1 MGP_NODShiLtJ_G0027278.1 mouse_genomes_project 3 103544423 103545970 - Slc27a3 protein_coding retained_intron MGP_NODShiLtJ_T0061719.1 MGP_NODShiLtJ_G0027278.1 mouse_genomes_project 3 103545351 103546619 - Slc27a3 protein_coding processed_transcript MGP_NODShiLtJ_T0060803.1 MGP_NODShiLtJ_G0027099.1 mouse_genomes_project 3 76398001 76581414 + MGP_NODShiLtJ_P0060803 Iqcj protein_coding protein_coding MGP_NODShiLtJ_T0060805.1 MGP_NODShiLtJ_G0027099.1 mouse_genomes_project 3 76398094 76588899 + MGP_NODShiLtJ_P0060805 Iqcj protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061871.1 MGP_NODShiLtJ_G0027362.1 mouse_genomes_project 3 108192759 108218273 + MGP_NODShiLtJ_P0061871 Them4 protein_coding protein_coding MGP_NODShiLtJ_T0061872.1 MGP_NODShiLtJ_G0027362.1 mouse_genomes_project 3 108192800 108200841 + Them4 protein_coding retained_intron MGP_NODShiLtJ_T0061873.1 MGP_NODShiLtJ_G0027362.1 mouse_genomes_project 3 108192806 108208710 + Them4 protein_coding retained_intron MGP_NODShiLtJ_T0100503.1 MGP_NODShiLtJ_G0038897.1 mouse_genomes_project 3 177280576 177280699 + Gm25757 snoRNA snoRNA MGP_NODShiLtJ_T0014178.1 MGP_NODShiLtJ_G0012286.1 mouse_genomes_project 3 147383027 147383613 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007708.1 MGP_NODShiLtJ_G0006299.1 mouse_genomes_project 3 174191349 174195337 + Gm43468 lincRNA lincRNA MGP_NODShiLtJ_T0007627.1 MGP_NODShiLtJ_G0006231.1 mouse_genomes_project 3 143148809 143267345 + lincRNA lincRNA MGP_NODShiLtJ_T0010427.1 MGP_NODShiLtJ_G0008560.1 mouse_genomes_project 3 102214002 102214085 - Mir92b miRNA miRNA MGP_NODShiLtJ_T0059783.1 MGP_NODShiLtJ_G0026889.1 mouse_genomes_project 3 14469782 14495249 + MGP_NODShiLtJ_P0059783 E2f5 protein_coding protein_coding MGP_NODShiLtJ_T0059784.1 MGP_NODShiLtJ_G0026889.1 mouse_genomes_project 3 14469812 14495248 + MGP_NODShiLtJ_P0059784 E2f5 protein_coding protein_coding MGP_NODShiLtJ_T0004288.1 MGP_NODShiLtJ_G0003742.1 mouse_genomes_project 3 123650259 123652687 + Gm12500 antisense antisense MGP_NODShiLtJ_T0004289.1 MGP_NODShiLtJ_G0003742.1 mouse_genomes_project 3 123650651 123652685 + Gm12500 antisense antisense MGP_NODShiLtJ_T0063856.1 MGP_NODShiLtJ_G0027778.1 mouse_genomes_project 3 168000858 168146215 + MGP_NODShiLtJ_P0063856 Ddah1 protein_coding protein_coding MGP_NODShiLtJ_T0063857.1 MGP_NODShiLtJ_G0027778.1 mouse_genomes_project 3 168056643 168140335 + Ddah1 protein_coding processed_transcript MGP_NODShiLtJ_T0001096.1 MGP_NODShiLtJ_G0001019.1 mouse_genomes_project 3 26732966 26733160 + TEC TEC MGP_NODShiLtJ_T0001276.1 MGP_NODShiLtJ_G0001197.1 mouse_genomes_project 3 140447733 140448806 - TEC TEC MGP_NODShiLtJ_T0062810.1 MGP_NODShiLtJ_G0027574.1 mouse_genomes_project 3 123430162 123433028 + MGP_NODShiLtJ_P0062810 Gstm5 protein_coding protein_coding MGP_NODShiLtJ_T0062811.1 MGP_NODShiLtJ_G0027574.1 mouse_genomes_project 3 123430177 123432917 + MGP_NODShiLtJ_P0062811 Gstm5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062812.1 MGP_NODShiLtJ_G0027574.1 mouse_genomes_project 3 123430187 123433028 + MGP_NODShiLtJ_P0062812 Gstm5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062813.1 MGP_NODShiLtJ_G0027574.1 mouse_genomes_project 3 123430282 123432687 + MGP_NODShiLtJ_P0062813 Gstm5 protein_coding protein_coding MGP_NODShiLtJ_T0062814.1 MGP_NODShiLtJ_G0027574.1 mouse_genomes_project 3 123430295 123432891 + MGP_NODShiLtJ_P0062814 Gstm5 protein_coding protein_coding MGP_NODShiLtJ_T0062815.1 MGP_NODShiLtJ_G0027574.1 mouse_genomes_project 3 123430588 123433020 + MGP_NODShiLtJ_P0062815 Gstm5 protein_coding protein_coding MGP_NODShiLtJ_T0014029.1 MGP_NODShiLtJ_G0012137.1 mouse_genomes_project 3 98766741 98767075 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062946.1 MGP_NODShiLtJ_G0027604.1 mouse_genomes_project 3 124499840 124542220 - MGP_NODShiLtJ_P0062946 Fndc7 protein_coding protein_coding MGP_NODShiLtJ_T0062947.1 MGP_NODShiLtJ_G0027604.1 mouse_genomes_project 3 124499845 124504775 - Fndc7 protein_coding processed_transcript MGP_NODShiLtJ_T0062948.1 MGP_NODShiLtJ_G0027604.1 mouse_genomes_project 3 124501485 124542522 - MGP_NODShiLtJ_P0062948 Fndc7 protein_coding protein_coding MGP_NODShiLtJ_T0062949.1 MGP_NODShiLtJ_G0027604.1 mouse_genomes_project 3 124501502 124542329 - MGP_NODShiLtJ_P0062949 Fndc7 protein_coding protein_coding MGP_NODShiLtJ_T0062950.1 MGP_NODShiLtJ_G0027604.1 mouse_genomes_project 3 124502250 124504771 - Fndc7 protein_coding processed_transcript MGP_NODShiLtJ_T0062951.1 MGP_NODShiLtJ_G0027604.1 mouse_genomes_project 3 124508847 124517593 - Fndc7 protein_coding processed_transcript MGP_NODShiLtJ_T0062952.1 MGP_NODShiLtJ_G0027604.1 mouse_genomes_project 3 124516334 124528742 - Fndc7 protein_coding retained_intron MGP_NODShiLtJ_T0062807.1 MGP_NODShiLtJ_G0027573.1 mouse_genomes_project 3 123410210 123426688 + MGP_NODShiLtJ_P0062807 Eps8l3 protein_coding protein_coding MGP_NODShiLtJ_T0062808.1 MGP_NODShiLtJ_G0027573.1 mouse_genomes_project 3 123410225 123414235 + Eps8l3 protein_coding processed_transcript MGP_NODShiLtJ_T0062809.1 MGP_NODShiLtJ_G0027573.1 mouse_genomes_project 3 123410243 123414611 + MGP_NODShiLtJ_P0062809 Eps8l3 protein_coding protein_coding MGP_NODShiLtJ_T0100490.1 MGP_NODShiLtJ_G0038884.1 mouse_genomes_project 3 139205629 139205757 - Gm25013 snoRNA snoRNA MGP_NODShiLtJ_T0062974.1 MGP_NODShiLtJ_G0027611.1 mouse_genomes_project 3 125045200 125416894 + MGP_NODShiLtJ_P0062974 Vav3 protein_coding protein_coding MGP_NODShiLtJ_T0062975.1 MGP_NODShiLtJ_G0027611.1 mouse_genomes_project 3 125045230 125293583 + Vav3 protein_coding retained_intron MGP_NODShiLtJ_T0062976.1 MGP_NODShiLtJ_G0027611.1 mouse_genomes_project 3 125045586 125416896 + MGP_NODShiLtJ_P0062976 Vav3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062977.1 MGP_NODShiLtJ_G0027611.1 mouse_genomes_project 3 125045653 125168754 + Vav3 protein_coding processed_transcript MGP_NODShiLtJ_T0062978.1 MGP_NODShiLtJ_G0027611.1 mouse_genomes_project 3 125222410 125232334 + Vav3 protein_coding processed_transcript MGP_NODShiLtJ_T0062979.1 MGP_NODShiLtJ_G0027611.1 mouse_genomes_project 3 125303915 125416890 + MGP_NODShiLtJ_P0062979 Vav3 protein_coding protein_coding MGP_NODShiLtJ_T0062980.1 MGP_NODShiLtJ_G0027611.1 mouse_genomes_project 3 125379060 125414095 + Vav3 protein_coding processed_transcript MGP_NODShiLtJ_T0062994.1 MGP_NODShiLtJ_G0027613.1 mouse_genomes_project 3 126019098 126023988 - MGP_NODShiLtJ_P0062994 Prmt6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062995.1 MGP_NODShiLtJ_G0027613.1 mouse_genomes_project 3 126019101 126023983 - MGP_NODShiLtJ_P0062995 Prmt6 protein_coding protein_coding MGP_NODShiLtJ_T0062996.1 MGP_NODShiLtJ_G0027613.1 mouse_genomes_project 3 126021538 126023988 - MGP_NODShiLtJ_P0062996 Prmt6 protein_coding protein_coding MGP_NODShiLtJ_T0007585.1 MGP_NODShiLtJ_G0006200.1 mouse_genomes_project 3 117608105 117609370 + Gm42682 lincRNA lincRNA MGP_NODShiLtJ_T0062393.1 MGP_NODShiLtJ_G0027471.1 mouse_genomes_project 3 112833012 112858696 - MGP_NODShiLtJ_P0062393 protein_coding protein_coding MGP_NODShiLtJ_T0062395.1 MGP_NODShiLtJ_G0027471.1 mouse_genomes_project 3 112833945 112858613 - MGP_NODShiLtJ_P0062395 protein_coding protein_coding MGP_NODShiLtJ_T0014197.1 MGP_NODShiLtJ_G0012305.1 mouse_genomes_project 3 154868605 154869104 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004223.1 MGP_NODShiLtJ_G0003705.1 mouse_genomes_project 3 102155454 102156993 - Gm16069 antisense antisense MGP_NODShiLtJ_T0001257.1 MGP_NODShiLtJ_G0001178.1 mouse_genomes_project 3 124142263 124144436 - TEC TEC MGP_NODShiLtJ_T0001103.1 MGP_NODShiLtJ_G0001026.1 mouse_genomes_project 3 32577886 32580007 - TEC TEC MGP_NODShiLtJ_T0060963.1 MGP_NODShiLtJ_G0027136.1 mouse_genomes_project 3 92976984 93184205 + MGP_NODShiLtJ_P0060963 Pdgfc protein_coding protein_coding MGP_NODShiLtJ_T0060964.1 MGP_NODShiLtJ_G0027136.1 mouse_genomes_project 3 92977740 93184199 + MGP_NODShiLtJ_P0060964 Pdgfc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060965.1 MGP_NODShiLtJ_G0027136.1 mouse_genomes_project 3 92977992 93180935 + MGP_NODShiLtJ_P0060965 Pdgfc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013999.1 MGP_NODShiLtJ_G0012107.1 mouse_genomes_project 3 84638884 84639221 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060872.1 MGP_NODShiLtJ_G0027117.1 mouse_genomes_project 3 83738062 83842375 - MGP_NODShiLtJ_P0060872 Bche protein_coding protein_coding MGP_NODShiLtJ_T0060873.1 MGP_NODShiLtJ_G0027117.1 mouse_genomes_project 3 83750706 83842202 - Bche protein_coding retained_intron MGP_NODShiLtJ_T0060874.1 MGP_NODShiLtJ_G0027117.1 mouse_genomes_project 3 83832272 83842227 - MGP_NODShiLtJ_P0060874 Bche protein_coding protein_coding MGP_NODShiLtJ_T0060875.1 MGP_NODShiLtJ_G0027117.1 mouse_genomes_project 3 83834761 83842227 - Bche protein_coding processed_transcript MGP_NODShiLtJ_T0010450.1 MGP_NODShiLtJ_G0008583.1 mouse_genomes_project 3 147207435 147207503 + Mir302c miRNA miRNA MGP_NODShiLtJ_T0007537.1 MGP_NODShiLtJ_G0006167.1 mouse_genomes_project 3 99795369 99800118 + Gm37855 lincRNA lincRNA MGP_NODShiLtJ_T0001233.1 MGP_NODShiLtJ_G0001154.1 mouse_genomes_project 3 107015357 107017893 + TEC TEC MGP_NODShiLtJ_T0099188.1 MGP_NODShiLtJ_G0037582.1 mouse_genomes_project 3 98432261 98432325 - Gm27811 snRNA snRNA MGP_NODShiLtJ_T0007403.1 MGP_NODShiLtJ_G0006062.1 mouse_genomes_project 3 15100863 15119775 - Gm33819 lincRNA lincRNA MGP_NODShiLtJ_T0063763.1 MGP_NODShiLtJ_G0027758.1 mouse_genomes_project 3 164370158 164450822 + MGP_NODShiLtJ_P0063763 Gbp2b protein_coding protein_coding MGP_NODShiLtJ_T0061515.1 MGP_NODShiLtJ_G0027245.1 mouse_genomes_project 3 102305534 102315777 - MGP_NODShiLtJ_P0061515 Efna3 protein_coding protein_coding MGP_NODShiLtJ_T0061516.1 MGP_NODShiLtJ_G0027245.1 mouse_genomes_project 3 102306995 102315699 - MGP_NODShiLtJ_P0061516 Efna3 protein_coding protein_coding MGP_NODShiLtJ_T0061517.1 MGP_NODShiLtJ_G0027245.1 mouse_genomes_project 3 102307490 102314439 - Efna3 protein_coding processed_transcript MGP_NODShiLtJ_T0001298.1 MGP_NODShiLtJ_G0001219.1 mouse_genomes_project 3 146663285 146666392 - TEC TEC MGP_NODShiLtJ_T0001308.1 MGP_NODShiLtJ_G0001229.1 mouse_genomes_project 3 147590414 147593435 - TEC TEC MGP_NODShiLtJ_T0059961.1 MGP_NODShiLtJ_G0026931.1 mouse_genomes_project 3 30862353 30879961 + MGP_NODShiLtJ_P0059961 Eif5a2 protein_coding protein_coding MGP_NODShiLtJ_T0063120.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138200765 138271866 - MGP_NODShiLtJ_P0063120 Ptbp2 protein_coding protein_coding MGP_NODShiLtJ_T0063121.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138200765 138271454 - MGP_NODShiLtJ_P0063121 Ptbp2 protein_coding protein_coding MGP_NODShiLtJ_T0063122.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138202343 138271300 - MGP_NODShiLtJ_P0063122 Ptbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063123.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138202368 138208175 - MGP_NODShiLtJ_P0063123 Ptbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063124.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138202407 138223779 - Ptbp2 protein_coding retained_intron MGP_NODShiLtJ_T0063125.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138202832 138206422 - Ptbp2 protein_coding retained_intron MGP_NODShiLtJ_T0063126.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138206141 138223410 - MGP_NODShiLtJ_P0063126 Ptbp2 protein_coding protein_coding MGP_NODShiLtJ_T0063127.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138221621 138225612 - Ptbp2 protein_coding retained_intron MGP_NODShiLtJ_T0063128.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138230700 138271352 - MGP_NODShiLtJ_P0063128 Ptbp2 protein_coding protein_coding MGP_NODShiLtJ_T0063129.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138232993 138272526 - Ptbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0063130.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138246380 138272528 - Ptbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0063131.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138246385 138271753 - Ptbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0063132.1 MGP_NODShiLtJ_G0027641.1 mouse_genomes_project 3 138246387 138271373 - MGP_NODShiLtJ_P0063132 Ptbp2 protein_coding protein_coding MGP_NODShiLtJ_T0007650.1 MGP_NODShiLtJ_G0006252.1 mouse_genomes_project 3 154664663 154678399 + Gm43194 lincRNA lincRNA MGP_NODShiLtJ_T0007651.1 MGP_NODShiLtJ_G0006252.1 mouse_genomes_project 3 154664801 154681706 + Gm43194 lincRNA lincRNA MGP_NODShiLtJ_T0064057.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176085670 176171964 + MGP_NODShiLtJ_P0064057 Pigk protein_coding protein_coding MGP_NODShiLtJ_T0064058.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176085676 176115604 + Pigk protein_coding retained_intron MGP_NODShiLtJ_T0064059.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176085683 176223242 + MGP_NODShiLtJ_P0064059 Pigk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064060.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176085683 176166845 + MGP_NODShiLtJ_P0064060 Pigk protein_coding protein_coding MGP_NODShiLtJ_T0064061.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176085690 176368457 + MGP_NODShiLtJ_P0064061 Pigk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064062.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176085693 176166576 + MGP_NODShiLtJ_P0064062 Pigk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064063.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176112482 176114636 + Pigk protein_coding processed_transcript MGP_NODShiLtJ_T0064064.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176112701 176166771 + MGP_NODShiLtJ_P0064064 Pigk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064065.1 MGP_NODShiLtJ_G0027810.1 mouse_genomes_project 3 176137819 176140963 + Pigk protein_coding processed_transcript MGP_NODShiLtJ_T0014001.1 MGP_NODShiLtJ_G0012109.1 mouse_genomes_project 3 85409898 85410523 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101901.1 MGP_NODShiLtJ_G0040069.1 mouse_genomes_project 3 180724966 180725441 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0063672.1 MGP_NODShiLtJ_G0027739.1 mouse_genomes_project 3 159114730 159133821 + MGP_NODShiLtJ_P0063672 Trmt10a protein_coding protein_coding MGP_NODShiLtJ_T0063673.1 MGP_NODShiLtJ_G0027739.1 mouse_genomes_project 3 159114751 159127920 + Trmt10a protein_coding retained_intron MGP_NODShiLtJ_T0063674.1 MGP_NODShiLtJ_G0027739.1 mouse_genomes_project 3 159114799 159133818 + MGP_NODShiLtJ_P0063674 Trmt10a protein_coding protein_coding MGP_NODShiLtJ_T0063675.1 MGP_NODShiLtJ_G0027739.1 mouse_genomes_project 3 159115081 159119534 + MGP_NODShiLtJ_P0063675 Trmt10a protein_coding protein_coding MGP_NODShiLtJ_T0063676.1 MGP_NODShiLtJ_G0027739.1 mouse_genomes_project 3 159115143 159119636 + MGP_NODShiLtJ_P0063676 Trmt10a protein_coding protein_coding MGP_NODShiLtJ_T0063677.1 MGP_NODShiLtJ_G0027739.1 mouse_genomes_project 3 159115192 159121653 + MGP_NODShiLtJ_P0063677 Trmt10a protein_coding protein_coding MGP_NODShiLtJ_T0060650.1 MGP_NODShiLtJ_G0027059.1 mouse_genomes_project 3 66474951 66513690 - MGP_NODShiLtJ_P0060650 Igsf10 protein_coding protein_coding MGP_NODShiLtJ_T0060651.1 MGP_NODShiLtJ_G0027059.1 mouse_genomes_project 3 66476141 66513593 - MGP_NODShiLtJ_P0060651 Igsf10 protein_coding protein_coding MGP_NODShiLtJ_T0060652.1 MGP_NODShiLtJ_G0027059.1 mouse_genomes_project 3 66476141 66513828 - MGP_NODShiLtJ_P0060652 Igsf10 protein_coding protein_coding MGP_NODShiLtJ_T0060653.1 MGP_NODShiLtJ_G0027059.1 mouse_genomes_project 3 66508422 66513690 - MGP_NODShiLtJ_P0060653 Igsf10 protein_coding protein_coding MGP_NODShiLtJ_T0061233.1 MGP_NODShiLtJ_G0027202.1 mouse_genomes_project 3 101040045 101059821 - MGP_NODShiLtJ_P0061233 Tsacc protein_coding protein_coding MGP_NODShiLtJ_T0061234.1 MGP_NODShiLtJ_G0027202.1 mouse_genomes_project 3 101040048 101059660 - MGP_NODShiLtJ_P0061234 Tsacc protein_coding protein_coding MGP_NODShiLtJ_T0063690.1 MGP_NODShiLtJ_G0027744.1 mouse_genomes_project 3 159435560 159439882 + Adh4 protein_coding processed_transcript MGP_NODShiLtJ_T0063691.1 MGP_NODShiLtJ_G0027744.1 mouse_genomes_project 3 159435581 159448887 + MGP_NODShiLtJ_P0063691 Adh4 protein_coding protein_coding MGP_NODShiLtJ_T0063692.1 MGP_NODShiLtJ_G0027744.1 mouse_genomes_project 3 159435589 159455683 + MGP_NODShiLtJ_P0063692 Adh4 protein_coding protein_coding MGP_NODShiLtJ_T0007632.1 MGP_NODShiLtJ_G0006236.1 mouse_genomes_project 3 147709038 147711198 + Gm43053 lincRNA lincRNA MGP_NODShiLtJ_T0007497.1 MGP_NODShiLtJ_G0006133.1 mouse_genomes_project 3 65793783 65909012 + 4930593A02Rik lincRNA lincRNA MGP_NODShiLtJ_T0007498.1 MGP_NODShiLtJ_G0006133.1 mouse_genomes_project 3 65836532 65919096 + 4930593A02Rik lincRNA lincRNA MGP_NODShiLtJ_T0013981.1 MGP_NODShiLtJ_G0012089.1 mouse_genomes_project 3 77943870 77944130 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004159.1 MGP_NODShiLtJ_G0003658.1 mouse_genomes_project 3 33684200 33718464 + Gm15496 antisense antisense MGP_NODShiLtJ_T0004160.1 MGP_NODShiLtJ_G0003658.1 mouse_genomes_project 3 33711172 33716581 + Gm15496 antisense antisense MGP_NODShiLtJ_T0061891.1 MGP_NODShiLtJ_G0027368.1 mouse_genomes_project 3 108321993 108324258 - protein_coding retained_intron MGP_NODShiLtJ_T0061892.1 MGP_NODShiLtJ_G0027368.1 mouse_genomes_project 3 108322755 108326199 - MGP_NODShiLtJ_P0061892 protein_coding protein_coding MGP_NODShiLtJ_T0061893.1 MGP_NODShiLtJ_G0027368.1 mouse_genomes_project 3 108322976 108334243 - MGP_NODShiLtJ_P0061893 protein_coding protein_coding MGP_NODShiLtJ_T0061894.1 MGP_NODShiLtJ_G0027368.1 mouse_genomes_project 3 108322976 108334161 - MGP_NODShiLtJ_P0061894 protein_coding protein_coding MGP_NODShiLtJ_T0061895.1 MGP_NODShiLtJ_G0027368.1 mouse_genomes_project 3 108322976 108324707 - MGP_NODShiLtJ_P0061895 protein_coding protein_coding MGP_NODShiLtJ_T0061896.1 MGP_NODShiLtJ_G0027368.1 mouse_genomes_project 3 108322976 108326150 - MGP_NODShiLtJ_P0061896 protein_coding protein_coding MGP_NODShiLtJ_T0061897.1 MGP_NODShiLtJ_G0027368.1 mouse_genomes_project 3 108322976 108326220 - MGP_NODShiLtJ_P0061897 protein_coding protein_coding MGP_NODShiLtJ_T0061898.1 MGP_NODShiLtJ_G0027368.1 mouse_genomes_project 3 108324705 108326346 - protein_coding retained_intron MGP_NODShiLtJ_T0010455.1 MGP_NODShiLtJ_G0008588.1 mouse_genomes_project 3 154607945 154608039 - Gm44361 miRNA miRNA MGP_NODShiLtJ_T0013909.1 MGP_NODShiLtJ_G0012017.1 mouse_genomes_project 3 55161936 55162292 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007416.1 MGP_NODShiLtJ_G0006070.1 mouse_genomes_project 3 22213322 22214041 - Gm29137 lincRNA lincRNA MGP_NODShiLtJ_T0001123.1 MGP_NODShiLtJ_G0001046.1 mouse_genomes_project 3 38743303 38744100 - TEC TEC MGP_NODShiLtJ_T0007571.1 MGP_NODShiLtJ_G0006188.1 mouse_genomes_project 3 112311211 112352698 + Gm5544 lincRNA lincRNA MGP_NODShiLtJ_T0061876.1 MGP_NODShiLtJ_G0027364.1 mouse_genomes_project 3 108250228 108252357 + MGP_NODShiLtJ_P0061876 C2cd4d protein_coding protein_coding MGP_NODShiLtJ_T0061877.1 MGP_NODShiLtJ_G0027364.1 mouse_genomes_project 3 108250293 108250955 + C2cd4d protein_coding retained_intron MGP_NODShiLtJ_T0007526.1 MGP_NODShiLtJ_G0006157.1 mouse_genomes_project 3 94968239 94975503 + Gm30043 lincRNA lincRNA MGP_NODShiLtJ_T0098336.1 MGP_NODShiLtJ_G0036741.1 mouse_genomes_project 3 116980326 116983208 + 4632404M16Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0101889.1 MGP_NODShiLtJ_G0040057.1 mouse_genomes_project 3 113329974 113332685 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0061797.1 MGP_NODShiLtJ_G0027305.1 mouse_genomes_project 3 105793829 105798387 + MGP_NODShiLtJ_P0061797 Sprr2a2 protein_coding protein_coding MGP_NODShiLtJ_T0061799.1 MGP_NODShiLtJ_G0027305.1 mouse_genomes_project 3 105796439 105797121 + MGP_NODShiLtJ_P0061799 Sprr2a2 protein_coding protein_coding MGP_NODShiLtJ_T0014093.1 MGP_NODShiLtJ_G0012201.1 mouse_genomes_project 3 116094509 116094946 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0059821.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19916725 20013967 - MGP_NODShiLtJ_P0059821 Pde7a protein_coding protein_coding MGP_NODShiLtJ_T0059822.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19919592 19962290 - MGP_NODShiLtJ_P0059822 Pde7a protein_coding protein_coding MGP_NODShiLtJ_T0059823.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19922295 19924940 - Pde7a protein_coding retained_intron MGP_NODShiLtJ_T0059824.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19922632 19928442 - Pde7a protein_coding processed_transcript MGP_NODShiLtJ_T0059825.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19925200 19957509 - MGP_NODShiLtJ_P0059825 Pde7a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059826.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19925272 19932334 - Pde7a protein_coding retained_intron MGP_NODShiLtJ_T0059827.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19928717 20013698 - MGP_NODShiLtJ_P0059827 Pde7a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059828.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19932285 19962247 - MGP_NODShiLtJ_P0059828 Pde7a protein_coding protein_coding MGP_NODShiLtJ_T0059829.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19953952 20013950 - Pde7a protein_coding retained_intron MGP_NODShiLtJ_T0059830.1 MGP_NODShiLtJ_G0026906.1 mouse_genomes_project 3 19954050 20013549 - Pde7a protein_coding processed_transcript MGP_NODShiLtJ_T0062482.1 MGP_NODShiLtJ_G0027499.1 mouse_genomes_project 3 117342471 117395407 + MGP_NODShiLtJ_P0062482 Ngf protein_coding protein_coding MGP_NODShiLtJ_T0062483.1 MGP_NODShiLtJ_G0027499.1 mouse_genomes_project 3 117342480 117384401 + MGP_NODShiLtJ_P0062483 Ngf protein_coding protein_coding MGP_NODShiLtJ_T0062484.1 MGP_NODShiLtJ_G0027499.1 mouse_genomes_project 3 117342480 117395572 + MGP_NODShiLtJ_P0062484 Ngf protein_coding protein_coding MGP_NODShiLtJ_T0062485.1 MGP_NODShiLtJ_G0027499.1 mouse_genomes_project 3 117362245 117395554 + MGP_NODShiLtJ_P0062485 Ngf protein_coding protein_coding MGP_NODShiLtJ_T0007394.1 MGP_NODShiLtJ_G0006056.1 mouse_genomes_project 3 8639142 8642416 - Gm38335 lincRNA lincRNA MGP_NODShiLtJ_T0062406.1 MGP_NODShiLtJ_G0027479.1 mouse_genomes_project 3 113701084 113784700 + MGP_NODShiLtJ_P0062406 Wars2 protein_coding protein_coding MGP_NODShiLtJ_T0062407.1 MGP_NODShiLtJ_G0027479.1 mouse_genomes_project 3 113701126 113788877 + MGP_NODShiLtJ_P0062407 Wars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062408.1 MGP_NODShiLtJ_G0027479.1 mouse_genomes_project 3 113701147 113810916 + MGP_NODShiLtJ_P0062408 Wars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062409.1 MGP_NODShiLtJ_G0027479.1 mouse_genomes_project 3 113701150 113784394 + MGP_NODShiLtJ_P0062409 Wars2 protein_coding protein_coding MGP_NODShiLtJ_T0062410.1 MGP_NODShiLtJ_G0027479.1 mouse_genomes_project 3 113701219 113770355 + Wars2 protein_coding retained_intron MGP_NODShiLtJ_T0004255.1 MGP_NODShiLtJ_G0003727.1 mouse_genomes_project 3 111315689 111373041 - Gm43734 antisense antisense MGP_NODShiLtJ_T0098348.1 MGP_NODShiLtJ_G0036753.1 mouse_genomes_project 3 119203481 119205697 - Gm42699 sense_intronic sense_intronic MGP_NODShiLtJ_T0100494.1 MGP_NODShiLtJ_G0038888.1 mouse_genomes_project 3 148342005 148342114 + Gm22293 snoRNA snoRNA MGP_NODShiLtJ_T0014185.1 MGP_NODShiLtJ_G0012293.1 mouse_genomes_project 3 150834171 150834469 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063966.1 MGP_NODShiLtJ_G0027799.1 mouse_genomes_project 3 174985121 175004651 - MGP_NODShiLtJ_P0063966 Ifi44 protein_coding protein_coding MGP_NODShiLtJ_T0063967.1 MGP_NODShiLtJ_G0027799.1 mouse_genomes_project 3 174986625 175004573 - Ifi44 protein_coding processed_transcript MGP_NODShiLtJ_T0063968.1 MGP_NODShiLtJ_G0027799.1 mouse_genomes_project 3 175000383 175004638 - Ifi44 protein_coding retained_intron MGP_NODShiLtJ_T0063969.1 MGP_NODShiLtJ_G0027799.1 mouse_genomes_project 3 175000484 175004594 - Ifi44 protein_coding processed_transcript MGP_NODShiLtJ_T0001260.1 MGP_NODShiLtJ_G0001181.1 mouse_genomes_project 3 126461019 126463837 + TEC TEC MGP_NODShiLtJ_T0004199.1 MGP_NODShiLtJ_G0003688.1 mouse_genomes_project 3 71895180 71900193 + Gm26850 antisense antisense MGP_NODShiLtJ_T0004200.1 MGP_NODShiLtJ_G0003688.1 mouse_genomes_project 3 71895182 71896998 + Gm26850 antisense antisense MGP_NODShiLtJ_T0011444.1 MGP_NODShiLtJ_G0009577.1 mouse_genomes_project 3 178636919 178637030 + Gm26456 misc_RNA misc_RNA MGP_NODShiLtJ_T0004274.1 MGP_NODShiLtJ_G0003739.1 mouse_genomes_project 3 121270679 121283312 + Gm42722 antisense antisense MGP_NODShiLtJ_T0059769.1 MGP_NODShiLtJ_G0026886.1 mouse_genomes_project 3 13654093 13969467 + MGP_NODShiLtJ_P0059769 Ralyl protein_coding protein_coding MGP_NODShiLtJ_T0059770.1 MGP_NODShiLtJ_G0026886.1 mouse_genomes_project 3 13654104 13970323 + MGP_NODShiLtJ_P0059770 Ralyl protein_coding protein_coding MGP_NODShiLtJ_T0059771.1 MGP_NODShiLtJ_G0026886.1 mouse_genomes_project 3 13654111 13970632 + MGP_NODShiLtJ_P0059771 Ralyl protein_coding protein_coding MGP_NODShiLtJ_T0062852.1 MGP_NODShiLtJ_G0027583.1 mouse_genomes_project 3 123672415 123713800 - MGP_NODShiLtJ_P0062852 Gnai3 protein_coding protein_coding MGP_NODShiLtJ_T0060849.1 MGP_NODShiLtJ_G0027108.1 mouse_genomes_project 3 77643796 77715702 - MGP_NODShiLtJ_P0060849 Kpna4 protein_coding protein_coding MGP_NODShiLtJ_T0060850.1 MGP_NODShiLtJ_G0027108.1 mouse_genomes_project 3 77651229 77715681 - MGP_NODShiLtJ_P0060850 Kpna4 protein_coding protein_coding MGP_NODShiLtJ_T0017849.1 MGP_NODShiLtJ_G0015389.1 mouse_genomes_project 3 136592036 136595749 + Gm26871 processed_transcript lincRNA MGP_NODShiLtJ_T0017850.1 MGP_NODShiLtJ_G0015389.1 mouse_genomes_project 3 136595586 136705357 + Gm26871 processed_transcript lincRNA MGP_NODShiLtJ_T0017851.1 MGP_NODShiLtJ_G0015389.1 mouse_genomes_project 3 136595711 136707439 + Gm26871 processed_transcript lincRNA MGP_NODShiLtJ_T0017852.1 MGP_NODShiLtJ_G0015389.1 mouse_genomes_project 3 136595722 136647171 + Gm26871 processed_transcript lincRNA MGP_NODShiLtJ_T0017853.1 MGP_NODShiLtJ_G0015389.1 mouse_genomes_project 3 136595755 136731711 + Gm26871 processed_transcript lincRNA MGP_NODShiLtJ_T0017854.1 MGP_NODShiLtJ_G0015389.1 mouse_genomes_project 3 136630802 136633746 + Gm26871 processed_transcript retained_intron MGP_NODShiLtJ_T0061165.1 MGP_NODShiLtJ_G0027185.1 mouse_genomes_project 3 100551822 100557847 + MGP_NODShiLtJ_P0061165 Sh2d2a protein_coding protein_coding MGP_NODShiLtJ_T0061166.1 MGP_NODShiLtJ_G0027185.1 mouse_genomes_project 3 100552072 100560839 + MGP_NODShiLtJ_P0061166 Sh2d2a protein_coding protein_coding MGP_NODShiLtJ_T0061167.1 MGP_NODShiLtJ_G0027185.1 mouse_genomes_project 3 100552078 100555012 + Sh2d2a protein_coding retained_intron MGP_NODShiLtJ_T0007487.1 MGP_NODShiLtJ_G0006127.1 mouse_genomes_project 3 60434383 60455201 + Gm31026 lincRNA lincRNA MGP_NODShiLtJ_T0004248.1 MGP_NODShiLtJ_G0003721.1 mouse_genomes_project 3 110357273 110368908 - Gm15444 antisense antisense MGP_NODShiLtJ_T0001242.1 MGP_NODShiLtJ_G0001163.1 mouse_genomes_project 3 111033962 111034486 + TEC TEC MGP_NODShiLtJ_T0001160.1 MGP_NODShiLtJ_G0001083.1 mouse_genomes_project 3 57781861 57784360 - TEC TEC MGP_NODShiLtJ_T0098320.1 MGP_NODShiLtJ_G0036725.1 mouse_genomes_project 3 108433547 108434425 - Gm43774 sense_intronic sense_intronic MGP_NODShiLtJ_T0101895.1 MGP_NODShiLtJ_G0040063.1 mouse_genomes_project 3 123441126 123446497 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099181.1 MGP_NODShiLtJ_G0037575.1 mouse_genomes_project 3 75405977 75406084 + Gm22295 snRNA snRNA MGP_NODShiLtJ_T0099198.1 MGP_NODShiLtJ_G0037592.1 mouse_genomes_project 3 103319554 103319659 + Gm24185 snRNA snRNA MGP_NODShiLtJ_T0004339.1 MGP_NODShiLtJ_G0003780.1 mouse_genomes_project 3 163340098 163363037 - Gm15689 antisense antisense MGP_NODShiLtJ_T0059876.1 MGP_NODShiLtJ_G0026915.1 mouse_genomes_project 3 21003431 21033942 - MGP_NODShiLtJ_P0059876 Cpa3 protein_coding protein_coding MGP_NODShiLtJ_T0059877.1 MGP_NODShiLtJ_G0026915.1 mouse_genomes_project 3 21018737 21032508 - Cpa3 protein_coding processed_transcript MGP_NODShiLtJ_T0098155.1 MGP_NODShiLtJ_G0036567.1 mouse_genomes_project 3 16180028 16180357 - Gm25863 ribozyme ribozyme MGP_NODShiLtJ_T0062280.1 MGP_NODShiLtJ_G0027444.1 mouse_genomes_project 3 110881321 110900933 + MGP_NODShiLtJ_P0062280 Itga10 protein_coding protein_coding MGP_NODShiLtJ_T0062281.1 MGP_NODShiLtJ_G0027444.1 mouse_genomes_project 3 110881321 110900927 + MGP_NODShiLtJ_P0062281 Itga10 protein_coding protein_coding MGP_NODShiLtJ_T0062282.1 MGP_NODShiLtJ_G0027444.1 mouse_genomes_project 3 110893919 110899576 + Itga10 protein_coding retained_intron MGP_NODShiLtJ_T0100432.1 MGP_NODShiLtJ_G0038826.1 mouse_genomes_project 3 5721862 5721979 - Gm23592 snoRNA snoRNA MGP_NODShiLtJ_T0062447.1 MGP_NODShiLtJ_G0027490.1 mouse_genomes_project 3 115802872 115875690 - MGP_NODShiLtJ_P0062447 Ptgfrn protein_coding protein_coding MGP_NODShiLtJ_T0062448.1 MGP_NODShiLtJ_G0027490.1 mouse_genomes_project 3 115824536 115836965 - Ptgfrn protein_coding processed_transcript MGP_NODShiLtJ_T0062449.1 MGP_NODShiLtJ_G0027490.1 mouse_genomes_project 3 115837452 115842233 - Ptgfrn protein_coding retained_intron MGP_NODShiLtJ_T0098334.1 MGP_NODShiLtJ_G0036739.1 mouse_genomes_project 3 116396824 116398142 - Gm42941 sense_intronic sense_intronic MGP_NODShiLtJ_T0013998.1 MGP_NODShiLtJ_G0012106.1 mouse_genomes_project 3 84200063 84201140 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013800.1 MGP_NODShiLtJ_G0011908.1 mouse_genomes_project 3 9825274 9825463 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007412.1 MGP_NODShiLtJ_G0006067.1 mouse_genomes_project 3 20657165 20658242 + 4632415L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0007413.1 MGP_NODShiLtJ_G0006067.1 mouse_genomes_project 3 20657177 20662289 + 4632415L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0100468.1 MGP_NODShiLtJ_G0038862.1 mouse_genomes_project 3 99703474 99703606 + Gm24472 snoRNA snoRNA MGP_NODShiLtJ_T0100448.1 MGP_NODShiLtJ_G0038842.1 mouse_genomes_project 3 55575212 55575340 + Gm22480 snoRNA snoRNA MGP_NODShiLtJ_T0099234.1 MGP_NODShiLtJ_G0037628.1 mouse_genomes_project 3 172008597 172008703 - Gm26468 snRNA snRNA MGP_NODShiLtJ_T0063100.1 MGP_NODShiLtJ_G0027635.1 mouse_genomes_project 3 134809950 134862539 - MGP_NODShiLtJ_P0063100 Palmd protein_coding protein_coding MGP_NODShiLtJ_T0063101.1 MGP_NODShiLtJ_G0027635.1 mouse_genomes_project 3 134813314 134862410 - MGP_NODShiLtJ_P0063101 Palmd protein_coding protein_coding MGP_NODShiLtJ_T0063102.1 MGP_NODShiLtJ_G0027635.1 mouse_genomes_project 3 134818738 134862538 - MGP_NODShiLtJ_P0063102 Palmd protein_coding protein_coding MGP_NODShiLtJ_T0063103.1 MGP_NODShiLtJ_G0027635.1 mouse_genomes_project 3 134858590 134862295 - Palmd protein_coding retained_intron MGP_NODShiLtJ_T0062535.1 MGP_NODShiLtJ_G0027507.1 mouse_genomes_project 3 118074992 118144784 + MGP_NODShiLtJ_P0062535 Dennd2c protein_coding protein_coding MGP_NODShiLtJ_T0062536.1 MGP_NODShiLtJ_G0027507.1 mouse_genomes_project 3 118075048 118130885 + Dennd2c protein_coding retained_intron MGP_NODShiLtJ_T0062537.1 MGP_NODShiLtJ_G0027507.1 mouse_genomes_project 3 118102501 118144753 + MGP_NODShiLtJ_P0062537 Dennd2c protein_coding protein_coding MGP_NODShiLtJ_T0062538.1 MGP_NODShiLtJ_G0027507.1 mouse_genomes_project 3 118114128 118143679 + Dennd2c protein_coding processed_transcript MGP_NODShiLtJ_T0062539.1 MGP_NODShiLtJ_G0027507.1 mouse_genomes_project 3 118114582 118144746 + Dennd2c protein_coding retained_intron MGP_NODShiLtJ_T0062540.1 MGP_NODShiLtJ_G0027507.1 mouse_genomes_project 3 118122774 118133542 + Dennd2c protein_coding retained_intron MGP_NODShiLtJ_T0013828.1 MGP_NODShiLtJ_G0011936.1 mouse_genomes_project 3 19346988 19347277 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013825.1 MGP_NODShiLtJ_G0011933.1 mouse_genomes_project 3 19121717 19122129 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001196.1 MGP_NODShiLtJ_G0001117.1 mouse_genomes_project 3 64611885 64613182 - TEC TEC MGP_NODShiLtJ_T0098376.1 MGP_NODShiLtJ_G0036781.1 mouse_genomes_project 3 176884330 176895325 - 1700015C17Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0004253.1 MGP_NODShiLtJ_G0003725.1 mouse_genomes_project 3 111085725 111087997 - 4930442L01Rik antisense antisense MGP_NODShiLtJ_T0004250.1 MGP_NODShiLtJ_G0003723.1 mouse_genomes_project 3 110415624 110419572 - Gm20628 antisense antisense MGP_NODShiLtJ_T0061312.1 MGP_NODShiLtJ_G0027216.1 mouse_genomes_project 3 101397265 101398541 - Lamtor2 protein_coding retained_intron MGP_NODShiLtJ_T0061313.1 MGP_NODShiLtJ_G0027216.1 mouse_genomes_project 3 101397265 101400471 - MGP_NODShiLtJ_P0061313 Lamtor2 protein_coding protein_coding MGP_NODShiLtJ_T0061314.1 MGP_NODShiLtJ_G0027216.1 mouse_genomes_project 3 101397266 101400306 - MGP_NODShiLtJ_P0061314 Lamtor2 protein_coding protein_coding MGP_NODShiLtJ_T0061315.1 MGP_NODShiLtJ_G0027216.1 mouse_genomes_project 3 101397267 101400340 - Lamtor2 protein_coding processed_transcript MGP_NODShiLtJ_T0061316.1 MGP_NODShiLtJ_G0027216.1 mouse_genomes_project 3 101399676 101400521 - Lamtor2 protein_coding retained_intron MGP_NODShiLtJ_T0014128.1 MGP_NODShiLtJ_G0012236.1 mouse_genomes_project 3 127135691 127136008 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100483.1 MGP_NODShiLtJ_G0038877.1 mouse_genomes_project 3 124029801 124029925 + Gm22942 snoRNA snoRNA MGP_NODShiLtJ_T0061674.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103335986 103337421 - MGP_NODShiLtJ_P0061674 protein_coding protein_coding MGP_NODShiLtJ_T0061675.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103336131 103337372 - protein_coding retained_intron MGP_NODShiLtJ_T0061676.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103336131 103337373 - protein_coding retained_intron MGP_NODShiLtJ_T0061677.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103336131 103337386 - MGP_NODShiLtJ_P0061677 protein_coding protein_coding MGP_NODShiLtJ_T0061678.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103336135 103337362 - protein_coding retained_intron MGP_NODShiLtJ_T0061679.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103336135 103337387 - MGP_NODShiLtJ_P0061679 protein_coding protein_coding MGP_NODShiLtJ_T0061680.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103336135 103337390 - MGP_NODShiLtJ_P0061680 protein_coding protein_coding MGP_NODShiLtJ_T0061681.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103336381 103337385 - protein_coding retained_intron MGP_NODShiLtJ_T0061682.1 MGP_NODShiLtJ_G0027270.1 mouse_genomes_project 3 103336687 103337384 - protein_coding retained_intron MGP_NODShiLtJ_T0061402.1 MGP_NODShiLtJ_G0027228.1 mouse_genomes_project 3 102044376 102063491 - MGP_NODShiLtJ_P0061402 Gm43738 protein_coding protein_coding MGP_NODShiLtJ_T0014247.1 MGP_NODShiLtJ_G0012355.1 mouse_genomes_project 3 175371553 175372109 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001093.1 MGP_NODShiLtJ_G0001016.1 mouse_genomes_project 3 21239998 21240244 + TEC TEC MGP_NODShiLtJ_T0060503.1 MGP_NODShiLtJ_G0027025.1 mouse_genomes_project 3 61325025 61326202 - MGP_NODShiLtJ_P0060503 Gm21958 protein_coding protein_coding MGP_NODShiLtJ_T0061025.1 MGP_NODShiLtJ_G0027154.1 mouse_genomes_project 3 96418056 96489646 - MGP_NODShiLtJ_P0061025 Mnd1 protein_coding protein_coding MGP_NODShiLtJ_T0001193.1 MGP_NODShiLtJ_G0001114.1 mouse_genomes_project 3 62939349 62942874 - TEC TEC MGP_NODShiLtJ_T0061659.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103152886 103175313 + MGP_NODShiLtJ_P0061659 Tpm3 protein_coding protein_coding MGP_NODShiLtJ_T0061660.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103160769 103172783 + Tpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061661.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103160769 103170966 + Tpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061662.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103160819 103182270 + MGP_NODShiLtJ_P0061662 Tpm3 protein_coding protein_coding MGP_NODShiLtJ_T0061663.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103160836 103174278 + MGP_NODShiLtJ_P0061663 Tpm3 protein_coding protein_coding MGP_NODShiLtJ_T0061664.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103160995 103172224 + MGP_NODShiLtJ_P0061664 Tpm3 protein_coding protein_coding MGP_NODShiLtJ_T0061665.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103168733 103170636 + Tpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061666.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103170397 103172994 + Tpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061667.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103170527 103171004 + Tpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061668.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103170544 103171716 + Tpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061669.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103171149 103173229 + Tpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061670.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103172817 103173655 + Tpm3 protein_coding retained_intron MGP_NODShiLtJ_T0061671.1 MGP_NODShiLtJ_G0027268.1 mouse_genomes_project 3 103173245 103182270 + Tpm3 protein_coding processed_transcript MGP_NODShiLtJ_T0014034.1 MGP_NODShiLtJ_G0012142.1 mouse_genomes_project 3 99686857 99687386 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013955.1 MGP_NODShiLtJ_G0012063.1 mouse_genomes_project 3 68838786 68839078 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014126.1 MGP_NODShiLtJ_G0012234.1 mouse_genomes_project 3 126183419 126184062 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007726.1 MGP_NODShiLtJ_G0006310.1 mouse_genomes_project 3 183303518 183574139 + Gm20752 lincRNA lincRNA MGP_NODShiLtJ_T0010424.1 MGP_NODShiLtJ_G0008557.1 mouse_genomes_project 3 100970290 100970379 + Mir9-1 miRNA miRNA MGP_NODShiLtJ_T0013929.1 MGP_NODShiLtJ_G0012037.1 mouse_genomes_project 3 60537098 60539233 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063926.1 MGP_NODShiLtJ_G0027795.1 mouse_genomes_project 3 169076496 169161918 - MGP_NODShiLtJ_P0063926 Prkacb protein_coding protein_coding MGP_NODShiLtJ_T0063927.1 MGP_NODShiLtJ_G0027795.1 mouse_genomes_project 3 169076786 169118808 - MGP_NODShiLtJ_P0063927 Prkacb protein_coding protein_coding MGP_NODShiLtJ_T0063928.1 MGP_NODShiLtJ_G0027795.1 mouse_genomes_project 3 169076786 169119328 - MGP_NODShiLtJ_P0063928 Prkacb protein_coding protein_coding MGP_NODShiLtJ_T0063929.1 MGP_NODShiLtJ_G0027795.1 mouse_genomes_project 3 169076788 169129963 - MGP_NODShiLtJ_P0063929 Prkacb protein_coding protein_coding MGP_NODShiLtJ_T0063930.1 MGP_NODShiLtJ_G0027795.1 mouse_genomes_project 3 169079249 169093282 - Prkacb protein_coding retained_intron MGP_NODShiLtJ_T0063931.1 MGP_NODShiLtJ_G0027795.1 mouse_genomes_project 3 169095625 169113107 - MGP_NODShiLtJ_P0063931 Prkacb protein_coding protein_coding MGP_NODShiLtJ_T0063932.1 MGP_NODShiLtJ_G0027795.1 mouse_genomes_project 3 169095625 169137147 - MGP_NODShiLtJ_P0063932 Prkacb protein_coding protein_coding MGP_NODShiLtJ_T0063933.1 MGP_NODShiLtJ_G0027795.1 mouse_genomes_project 3 169158472 169161948 - Prkacb protein_coding retained_intron MGP_NODShiLtJ_T0011442.1 MGP_NODShiLtJ_G0009575.1 mouse_genomes_project 3 145634786 145635054 - Gm26275 misc_RNA misc_RNA MGP_NODShiLtJ_T0014206.1 MGP_NODShiLtJ_G0012314.1 mouse_genomes_project 3 156619067 156619614 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007395.1 MGP_NODShiLtJ_G0006057.1 mouse_genomes_project 3 10829114 10850892 - Gm10745 lincRNA lincRNA MGP_NODShiLtJ_T0013896.1 MGP_NODShiLtJ_G0012004.1 mouse_genomes_project 3 47845753 47846099 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013801.1 MGP_NODShiLtJ_G0011909.1 mouse_genomes_project 3 10586845 10587859 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0063319.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146526011 146612588 - MGP_NODShiLtJ_P0063319 protein_coding protein_coding MGP_NODShiLtJ_T0063320.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146526013 146528368 - protein_coding retained_intron MGP_NODShiLtJ_T0063321.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146526013 146547668 - MGP_NODShiLtJ_P0063321 protein_coding protein_coding MGP_NODShiLtJ_T0063322.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146528307 146534114 - MGP_NODShiLtJ_P0063322 protein_coding protein_coding MGP_NODShiLtJ_T0063323.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146528308 146534114 - MGP_NODShiLtJ_P0063323 protein_coding protein_coding MGP_NODShiLtJ_T0063324.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146529889 146532669 - protein_coding retained_intron MGP_NODShiLtJ_T0063325.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146537497 146539419 - protein_coding retained_intron MGP_NODShiLtJ_T0063326.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146542051 146565680 - MGP_NODShiLtJ_P0063326 protein_coding protein_coding MGP_NODShiLtJ_T0063327.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146544395 146565479 - MGP_NODShiLtJ_P0063327 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063328.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146551393 147052996 - MGP_NODShiLtJ_P0063328 protein_coding protein_coding MGP_NODShiLtJ_T0063329.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146554456 146612564 - protein_coding retained_intron MGP_NODShiLtJ_T0063330.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146569977 147156698 - MGP_NODShiLtJ_P0063330 protein_coding protein_coding MGP_NODShiLtJ_T0063331.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146570805 147052935 - MGP_NODShiLtJ_P0063331 protein_coding protein_coding MGP_NODShiLtJ_T0063332.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146629416 146638377 - protein_coding retained_intron MGP_NODShiLtJ_T0063333.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146638902 147052968 - MGP_NODShiLtJ_P0063333 protein_coding protein_coding MGP_NODShiLtJ_T0063334.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146638961 147052968 - MGP_NODShiLtJ_P0063334 protein_coding protein_coding MGP_NODShiLtJ_T0063335.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146644972 146787271 - MGP_NODShiLtJ_P0063335 protein_coding protein_coding MGP_NODShiLtJ_T0063336.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146644972 147052904 - MGP_NODShiLtJ_P0063336 protein_coding protein_coding MGP_NODShiLtJ_T0063337.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146694368 146856321 - MGP_NODShiLtJ_P0063337 protein_coding protein_coding MGP_NODShiLtJ_T0063338.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146694973 146787163 - protein_coding retained_intron MGP_NODShiLtJ_T0063339.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146696786 147052891 - MGP_NODShiLtJ_P0063339 protein_coding protein_coding MGP_NODShiLtJ_T0063340.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146784636 146787129 - protein_coding retained_intron MGP_NODShiLtJ_T0063341.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146972325 147052932 - protein_coding retained_intron MGP_NODShiLtJ_T0063342.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 146973925 147156350 - protein_coding retained_intron MGP_NODShiLtJ_T0063343.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 147153454 147156608 - protein_coding retained_intron MGP_NODShiLtJ_T0063344.1 MGP_NODShiLtJ_G0027674.1 mouse_genomes_project 3 147156010 147156349 - MGP_NODShiLtJ_P0063344 protein_coding protein_coding MGP_NODShiLtJ_T0062961.1 MGP_NODShiLtJ_G0027606.1 mouse_genomes_project 3 124602070 124602642 + Henmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0062963.1 MGP_NODShiLtJ_G0027606.1 mouse_genomes_project 3 124602256 124604955 + MGP_NODShiLtJ_P0062963 Henmt1 protein_coding protein_coding MGP_NODShiLtJ_T0062964.1 MGP_NODShiLtJ_G0027606.1 mouse_genomes_project 3 124602281 124629675 + MGP_NODShiLtJ_P0062964 Henmt1 protein_coding protein_coding MGP_NODShiLtJ_T0062965.1 MGP_NODShiLtJ_G0027606.1 mouse_genomes_project 3 124602311 124628320 + MGP_NODShiLtJ_P0062965 Henmt1 protein_coding protein_coding MGP_NODShiLtJ_T0062966.1 MGP_NODShiLtJ_G0027606.1 mouse_genomes_project 3 124602721 124629773 + MGP_NODShiLtJ_P0062966 Henmt1 protein_coding protein_coding MGP_NODShiLtJ_T0062967.1 MGP_NODShiLtJ_G0027606.1 mouse_genomes_project 3 124603532 124629214 + MGP_NODShiLtJ_P0062967 Henmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062968.1 MGP_NODShiLtJ_G0027606.1 mouse_genomes_project 3 124603532 124629687 + MGP_NODShiLtJ_P0062968 Henmt1 protein_coding protein_coding MGP_NODShiLtJ_T0001143.1 MGP_NODShiLtJ_G0001066.1 mouse_genomes_project 3 49806213 49808784 - TEC TEC MGP_NODShiLtJ_T0061727.1 MGP_NODShiLtJ_G0027280.1 mouse_genomes_project 3 103614100 103632376 - MGP_NODShiLtJ_P0061727 Npr1 protein_coding protein_coding MGP_NODShiLtJ_T0061728.1 MGP_NODShiLtJ_G0027280.1 mouse_genomes_project 3 103614219 103616241 - Npr1 protein_coding retained_intron MGP_NODShiLtJ_T0061729.1 MGP_NODShiLtJ_G0027280.1 mouse_genomes_project 3 103619900 103623978 - Npr1 protein_coding processed_transcript MGP_NODShiLtJ_T0061730.1 MGP_NODShiLtJ_G0027280.1 mouse_genomes_project 3 103623900 103625445 - Npr1 protein_coding retained_intron MGP_NODShiLtJ_T0061731.1 MGP_NODShiLtJ_G0027280.1 mouse_genomes_project 3 103623919 103627926 - MGP_NODShiLtJ_P0061731 Npr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059711.1 MGP_NODShiLtJ_G0026867.1 mouse_genomes_project 3 7142461 7146349 - MGP_NODShiLtJ_P0059711 Hey1 protein_coding protein_coding MGP_NODShiLtJ_T0059712.1 MGP_NODShiLtJ_G0026867.1 mouse_genomes_project 3 7143801 7146084 - Hey1 protein_coding retained_intron MGP_NODShiLtJ_T0059713.1 MGP_NODShiLtJ_G0026867.1 mouse_genomes_project 3 7143898 7145725 - Hey1 protein_coding retained_intron MGP_NODShiLtJ_T0059714.1 MGP_NODShiLtJ_G0026867.1 mouse_genomes_project 3 7144644 7146064 - Hey1 protein_coding retained_intron MGP_NODShiLtJ_T0004319.1 MGP_NODShiLtJ_G0003767.1 mouse_genomes_project 3 149728253 149741978 + 6330410L21Rik antisense antisense MGP_NODShiLtJ_T0001101.1 MGP_NODShiLtJ_G0001024.1 mouse_genomes_project 3 32464973 32466607 - TEC TEC MGP_NODShiLtJ_T0062674.1 MGP_NODShiLtJ_G0027535.1 mouse_genomes_project 3 120910345 120919441 - MGP_NODShiLtJ_P0062674 Ddx20 protein_coding protein_coding MGP_NODShiLtJ_T0062675.1 MGP_NODShiLtJ_G0027535.1 mouse_genomes_project 3 120911714 120919319 - MGP_NODShiLtJ_P0062675 Ddx20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062676.1 MGP_NODShiLtJ_G0027535.1 mouse_genomes_project 3 120913583 120919311 - Ddx20 protein_coding retained_intron MGP_NODShiLtJ_T0063884.1 MGP_NODShiLtJ_G0027786.1 mouse_genomes_project 3 168720855 168760066 + MGP_NODShiLtJ_P0063884 Ssx2ip protein_coding protein_coding MGP_NODShiLtJ_T0063885.1 MGP_NODShiLtJ_G0027786.1 mouse_genomes_project 3 168720855 168759704 + MGP_NODShiLtJ_P0063885 Ssx2ip protein_coding protein_coding MGP_NODShiLtJ_T0063886.1 MGP_NODShiLtJ_G0027786.1 mouse_genomes_project 3 168720877 168760055 + MGP_NODShiLtJ_P0063886 Ssx2ip protein_coding protein_coding MGP_NODShiLtJ_T0063887.1 MGP_NODShiLtJ_G0027786.1 mouse_genomes_project 3 168720899 168758828 + MGP_NODShiLtJ_P0063887 Ssx2ip protein_coding protein_coding MGP_NODShiLtJ_T0063888.1 MGP_NODShiLtJ_G0027786.1 mouse_genomes_project 3 168720904 168735476 + MGP_NODShiLtJ_P0063888 Ssx2ip protein_coding protein_coding MGP_NODShiLtJ_T0063889.1 MGP_NODShiLtJ_G0027786.1 mouse_genomes_project 3 168721191 168736436 + MGP_NODShiLtJ_P0063889 Ssx2ip protein_coding protein_coding MGP_NODShiLtJ_T0063890.1 MGP_NODShiLtJ_G0027786.1 mouse_genomes_project 3 168749146 168752498 + Ssx2ip protein_coding retained_intron MGP_NODShiLtJ_T0001359.1 MGP_NODShiLtJ_G0001279.1 mouse_genomes_project 3 178639810 178642598 + TEC TEC MGP_NODShiLtJ_T0007584.1 MGP_NODShiLtJ_G0006199.1 mouse_genomes_project 3 117479406 117481627 + Gm42678 lincRNA lincRNA MGP_NODShiLtJ_T0064193.1 MGP_NODShiLtJ_G0027831.1 mouse_genomes_project 3 182043201 182075580 + MGP_NODShiLtJ_P0064193 Lrrc40 protein_coding protein_coding MGP_NODShiLtJ_T0064194.1 MGP_NODShiLtJ_G0027831.1 mouse_genomes_project 3 182043239 182074182 + MGP_NODShiLtJ_P0064194 Lrrc40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064195.1 MGP_NODShiLtJ_G0027831.1 mouse_genomes_project 3 182043241 182074182 + MGP_NODShiLtJ_P0064195 Lrrc40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064196.1 MGP_NODShiLtJ_G0027831.1 mouse_genomes_project 3 182043261 182058896 + MGP_NODShiLtJ_P0064196 Lrrc40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064197.1 MGP_NODShiLtJ_G0027831.1 mouse_genomes_project 3 182043289 182058885 + MGP_NODShiLtJ_P0064197 Lrrc40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064198.1 MGP_NODShiLtJ_G0027831.1 mouse_genomes_project 3 182043399 182058831 + MGP_NODShiLtJ_P0064198 Lrrc40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064199.1 MGP_NODShiLtJ_G0027831.1 mouse_genomes_project 3 182069336 182073639 + Lrrc40 protein_coding retained_intron MGP_NODShiLtJ_T0064200.1 MGP_NODShiLtJ_G0027831.1 mouse_genomes_project 3 182069737 182071115 + Lrrc40 protein_coding retained_intron MGP_NODShiLtJ_T0099152.1 MGP_NODShiLtJ_G0037546.1 mouse_genomes_project 3 6891660 6891752 + Gm24614 snRNA snRNA MGP_NODShiLtJ_T0011440.1 MGP_NODShiLtJ_G0009573.1 mouse_genomes_project 3 139968677 139968945 + Gm26027 misc_RNA misc_RNA MGP_NODShiLtJ_T0060099.1 MGP_NODShiLtJ_G0026958.1 mouse_genomes_project 3 35303857 35440548 + MGP_NODShiLtJ_P0060099 Usp13 protein_coding protein_coding MGP_NODShiLtJ_T0060100.1 MGP_NODShiLtJ_G0026958.1 mouse_genomes_project 3 35303882 35434637 + MGP_NODShiLtJ_P0060100 Usp13 protein_coding protein_coding MGP_NODShiLtJ_T0060101.1 MGP_NODShiLtJ_G0026958.1 mouse_genomes_project 3 35304022 35415580 + MGP_NODShiLtJ_P0060101 Usp13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060102.1 MGP_NODShiLtJ_G0026958.1 mouse_genomes_project 3 35415549 35434645 + MGP_NODShiLtJ_P0060102 Usp13 protein_coding protein_coding MGP_NODShiLtJ_T0007644.1 MGP_NODShiLtJ_G0006246.1 mouse_genomes_project 3 151809303 152119728 + lincRNA lincRNA MGP_NODShiLtJ_T0001256.1 MGP_NODShiLtJ_G0001177.1 mouse_genomes_project 3 123863265 123869178 + TEC TEC MGP_NODShiLtJ_T0062028.1 MGP_NODShiLtJ_G0027389.1 mouse_genomes_project 3 109126789 109132734 + MGP_NODShiLtJ_P0062028 protein_coding protein_coding MGP_NODShiLtJ_T0013958.1 MGP_NODShiLtJ_G0012066.1 mouse_genomes_project 3 70556304 70556886 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001262.1 MGP_NODShiLtJ_G0001183.1 mouse_genomes_project 3 133904759 133905785 + TEC TEC MGP_NODShiLtJ_T0001165.1 MGP_NODShiLtJ_G0001088.1 mouse_genomes_project 3 58002360 58004980 + TEC TEC MGP_NODShiLtJ_T0001166.1 MGP_NODShiLtJ_G0001088.1 mouse_genomes_project 3 58002415 58004980 + TEC TEC MGP_NODShiLtJ_T0001245.1 MGP_NODShiLtJ_G0001166.1 mouse_genomes_project 3 111714046 111747459 + TEC TEC MGP_NODShiLtJ_T0007515.1 MGP_NODShiLtJ_G0006148.1 mouse_genomes_project 3 86543328 86578337 + lincRNA lincRNA MGP_NODShiLtJ_T0007427.1 MGP_NODShiLtJ_G0006081.1 mouse_genomes_project 3 36264352 36332265 - lincRNA lincRNA MGP_NODShiLtJ_T0001179.1 MGP_NODShiLtJ_G0001100.1 mouse_genomes_project 3 58629054 58631066 + TEC TEC MGP_NODShiLtJ_T0001206.1 MGP_NODShiLtJ_G0001127.1 mouse_genomes_project 3 74130053 74131614 - TEC TEC MGP_NODShiLtJ_T0014192.1 MGP_NODShiLtJ_G0012300.1 mouse_genomes_project 3 153092338 153094542 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010394.1 MGP_NODShiLtJ_G0008527.1 mouse_genomes_project 3 605819 605911 + Gm23237 miRNA miRNA MGP_NODShiLtJ_T0007656.1 MGP_NODShiLtJ_G0006257.1 mouse_genomes_project 3 157816781 157819086 - Gm43356 lincRNA lincRNA MGP_NODShiLtJ_T0061807.1 MGP_NODShiLtJ_G0027312.1 mouse_genomes_project 3 105935107 105936388 + MGP_NODShiLtJ_P0061807 Sprr2i protein_coding protein_coding MGP_NODShiLtJ_T0001216.1 MGP_NODShiLtJ_G0001137.1 mouse_genomes_project 3 86759342 86761519 + TEC TEC MGP_NODShiLtJ_T0013830.1 MGP_NODShiLtJ_G0011938.1 mouse_genomes_project 3 20318995 20319743 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013951.1 MGP_NODShiLtJ_G0012059.1 mouse_genomes_project 3 67708517 67709253 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098157.1 MGP_NODShiLtJ_G0036569.1 mouse_genomes_project 3 144008754 144009044 + Rprl3 ribozyme ribozyme MGP_NODShiLtJ_T0100457.1 MGP_NODShiLtJ_G0038851.1 mouse_genomes_project 3 78660693 78660824 - Gm23484 snoRNA snoRNA MGP_NODShiLtJ_T0098199.1 MGP_NODShiLtJ_G0036611.1 mouse_genomes_project 3 124165968 124166382 - Scarna2 scaRNA scaRNA MGP_NODShiLtJ_T0013950.1 MGP_NODShiLtJ_G0012058.1 mouse_genomes_project 3 67281547 67282062 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014243.1 MGP_NODShiLtJ_G0012351.1 mouse_genomes_project 3 171243509 171244025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101864.1 MGP_NODShiLtJ_G0040032.1 mouse_genomes_project 3 91957089 91957240 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007525.1 MGP_NODShiLtJ_G0006156.1 mouse_genomes_project 3 93889818 93892819 + A830029E22Rik lincRNA lincRNA MGP_NODShiLtJ_T0063347.1 MGP_NODShiLtJ_G0027676.1 mouse_genomes_project 3 147207924 147208839 - MGP_NODShiLtJ_P0063347 protein_coding protein_coding MGP_NODShiLtJ_T0014045.1 MGP_NODShiLtJ_G0012153.1 mouse_genomes_project 3 104252591 104252894 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010425.1 MGP_NODShiLtJ_G0008558.1 mouse_genomes_project 3 101279676 101279749 - Mir7011 miRNA miRNA MGP_NODShiLtJ_T0063600.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156283043 156394316 - MGP_NODShiLtJ_P0063600 Nfkb1 protein_coding protein_coding MGP_NODShiLtJ_T0063601.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156283045 156308169 - MGP_NODShiLtJ_P0063601 Nfkb1 protein_coding protein_coding MGP_NODShiLtJ_T0063602.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156283133 156303695 - MGP_NODShiLtJ_P0063602 Nfkb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063603.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156283270 156308382 - Nfkb1 protein_coding retained_intron MGP_NODShiLtJ_T0063604.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156283666 156369656 - MGP_NODShiLtJ_P0063604 Nfkb1 protein_coding protein_coding MGP_NODShiLtJ_T0063605.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156283669 156371196 - MGP_NODShiLtJ_P0063605 Nfkb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063606.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156290047 156293709 - Nfkb1 protein_coding processed_transcript MGP_NODShiLtJ_T0063607.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156301757 156303758 - Nfkb1 protein_coding retained_intron MGP_NODShiLtJ_T0063608.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156310488 156394317 - Nfkb1 protein_coding retained_intron MGP_NODShiLtJ_T0063609.1 MGP_NODShiLtJ_G0027723.1 mouse_genomes_project 3 156317894 156322018 - Nfkb1 protein_coding retained_intron MGP_NODShiLtJ_T0013808.1 MGP_NODShiLtJ_G0011916.1 mouse_genomes_project 3 13446449 13446704 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017807.1 MGP_NODShiLtJ_G0015372.1 mouse_genomes_project 3 57864452 57871536 + 5031434O11Rik processed_transcript antisense MGP_NODShiLtJ_T0017808.1 MGP_NODShiLtJ_G0015372.1 mouse_genomes_project 3 57866888 57871524 + 5031434O11Rik processed_transcript antisense MGP_NODShiLtJ_T0017809.1 MGP_NODShiLtJ_G0015372.1 mouse_genomes_project 3 57868058 57871530 + 5031434O11Rik processed_transcript retained_intron MGP_NODShiLtJ_T0014011.1 MGP_NODShiLtJ_G0012119.1 mouse_genomes_project 3 89646950 89647499 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099156.1 MGP_NODShiLtJ_G0037550.1 mouse_genomes_project 3 20292053 20292217 + Gm23330 snRNA snRNA MGP_NODShiLtJ_T0060941.1 MGP_NODShiLtJ_G0027132.1 mouse_genomes_project 3 91538944 91570737 - MGP_NODShiLtJ_P0060941 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060942.1 MGP_NODShiLtJ_G0027132.1 mouse_genomes_project 3 91558918 91581565 - MGP_NODShiLtJ_P0060942 protein_coding protein_coding MGP_NODShiLtJ_T0060943.1 MGP_NODShiLtJ_G0027132.1 mouse_genomes_project 3 91566051 91581560 - MGP_NODShiLtJ_P0060943 protein_coding protein_coding MGP_NODShiLtJ_T0060944.1 MGP_NODShiLtJ_G0027132.1 mouse_genomes_project 3 91566180 91570767 - protein_coding processed_transcript MGP_NODShiLtJ_T0099209.1 MGP_NODShiLtJ_G0037603.1 mouse_genomes_project 3 117918312 117918477 - Gm22826 snRNA snRNA MGP_NODShiLtJ_T0007530.1 MGP_NODShiLtJ_G0006160.1 mouse_genomes_project 3 95367949 95371920 - Gm10710 lincRNA lincRNA MGP_NODShiLtJ_T0064025.1 MGP_NODShiLtJ_G0027806.1 mouse_genomes_project 3 175589934 175663582 - MGP_NODShiLtJ_P0064025 Fam73a protein_coding protein_coding MGP_NODShiLtJ_T0064026.1 MGP_NODShiLtJ_G0027806.1 mouse_genomes_project 3 175592016 175663580 - MGP_NODShiLtJ_P0064026 Fam73a protein_coding protein_coding MGP_NODShiLtJ_T0064027.1 MGP_NODShiLtJ_G0027806.1 mouse_genomes_project 3 175597704 175663558 - MGP_NODShiLtJ_P0064027 Fam73a protein_coding protein_coding MGP_NODShiLtJ_T0064028.1 MGP_NODShiLtJ_G0027806.1 mouse_genomes_project 3 175597871 175601541 - Fam73a protein_coding retained_intron MGP_NODShiLtJ_T0064029.1 MGP_NODShiLtJ_G0027806.1 mouse_genomes_project 3 175606582 175644608 - MGP_NODShiLtJ_P0064029 Fam73a protein_coding protein_coding MGP_NODShiLtJ_T0064030.1 MGP_NODShiLtJ_G0027806.1 mouse_genomes_project 3 175606756 175613532 - Fam73a protein_coding retained_intron MGP_NODShiLtJ_T0064031.1 MGP_NODShiLtJ_G0027806.1 mouse_genomes_project 3 175613074 175659312 - MGP_NODShiLtJ_P0064031 Fam73a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064032.1 MGP_NODShiLtJ_G0027806.1 mouse_genomes_project 3 175658858 175663559 - Fam73a protein_coding retained_intron MGP_NODShiLtJ_T0063379.1 MGP_NODShiLtJ_G0027682.1 mouse_genomes_project 3 147598630 147626542 - MGP_NODShiLtJ_P0063379 5730508B09Rik protein_coding protein_coding MGP_NODShiLtJ_T0063380.1 MGP_NODShiLtJ_G0027682.1 mouse_genomes_project 3 147599252 147626506 - MGP_NODShiLtJ_P0063380 5730508B09Rik protein_coding protein_coding MGP_NODShiLtJ_T0013846.1 MGP_NODShiLtJ_G0011954.1 mouse_genomes_project 3 28241629 28243596 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014013.1 MGP_NODShiLtJ_G0012121.1 mouse_genomes_project 3 90399201 90400046 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062530.1 MGP_NODShiLtJ_G0027506.1 mouse_genomes_project 3 118042500 118072108 + MGP_NODShiLtJ_P0062530 Ampd1 protein_coding protein_coding MGP_NODShiLtJ_T0062531.1 MGP_NODShiLtJ_G0027506.1 mouse_genomes_project 3 118042508 118072102 + MGP_NODShiLtJ_P0062531 Ampd1 protein_coding protein_coding MGP_NODShiLtJ_T0062532.1 MGP_NODShiLtJ_G0027506.1 mouse_genomes_project 3 118042539 118057403 + MGP_NODShiLtJ_P0062532 Ampd1 protein_coding protein_coding MGP_NODShiLtJ_T0062533.1 MGP_NODShiLtJ_G0027506.1 mouse_genomes_project 3 118062836 118063864 + Ampd1 protein_coding retained_intron MGP_NODShiLtJ_T0062534.1 MGP_NODShiLtJ_G0027506.1 mouse_genomes_project 3 118063507 118072094 + MGP_NODShiLtJ_P0062534 Ampd1 protein_coding protein_coding MGP_NODShiLtJ_T0001362.1 MGP_NODShiLtJ_G0001282.1 mouse_genomes_project 3 180643172 180644846 + TEC TEC MGP_NODShiLtJ_T0061455.1 MGP_NODShiLtJ_G0027236.1 mouse_genomes_project 3 102187908 102193660 + MGP_NODShiLtJ_P0061455 Gba protein_coding protein_coding MGP_NODShiLtJ_T0061456.1 MGP_NODShiLtJ_G0027236.1 mouse_genomes_project 3 102187916 102193662 + MGP_NODShiLtJ_P0061456 Gba protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061457.1 MGP_NODShiLtJ_G0027236.1 mouse_genomes_project 3 102187920 102193662 + MGP_NODShiLtJ_P0061457 Gba protein_coding protein_coding MGP_NODShiLtJ_T0061458.1 MGP_NODShiLtJ_G0027236.1 mouse_genomes_project 3 102190465 102191369 + Gba protein_coding retained_intron MGP_NODShiLtJ_T0061459.1 MGP_NODShiLtJ_G0027236.1 mouse_genomes_project 3 102193197 102193947 + Gba protein_coding retained_intron MGP_NODShiLtJ_T0001345.1 MGP_NODShiLtJ_G0001265.1 mouse_genomes_project 3 174244085 174250993 - TEC TEC MGP_NODShiLtJ_T0007493.1 MGP_NODShiLtJ_G0006130.1 mouse_genomes_project 3 64924389 64928960 - Gm42512 lincRNA lincRNA MGP_NODShiLtJ_T0061052.1 MGP_NODShiLtJ_G0027159.1 mouse_genomes_project 3 96844953 98340566 - MGP_NODShiLtJ_P0061052 protein_coding protein_coding MGP_NODShiLtJ_T0061075.1 MGP_NODShiLtJ_G0027159.1 mouse_genomes_project 3 98250360 98340568 - protein_coding processed_transcript MGP_NODShiLtJ_T0061076.1 MGP_NODShiLtJ_G0027159.1 mouse_genomes_project 3 98267178 98340418 - protein_coding retained_intron MGP_NODShiLtJ_T0059800.1 MGP_NODShiLtJ_G0026896.1 mouse_genomes_project 3 15516046 15562214 - MGP_NODShiLtJ_P0059800 protein_coding protein_coding MGP_NODShiLtJ_T0059803.1 MGP_NODShiLtJ_G0026896.1 mouse_genomes_project 3 15525412 15526580 - protein_coding retained_intron MGP_NODShiLtJ_T0060187.1 MGP_NODShiLtJ_G0026972.1 mouse_genomes_project 3 39285837 39315961 - MGP_NODShiLtJ_P0060187 Anxa5 protein_coding protein_coding MGP_NODShiLtJ_T0060188.1 MGP_NODShiLtJ_G0026972.1 mouse_genomes_project 3 39286078 39289243 - Anxa5 protein_coding retained_intron MGP_NODShiLtJ_T0060189.1 MGP_NODShiLtJ_G0026972.1 mouse_genomes_project 3 39289119 39315726 - MGP_NODShiLtJ_P0060189 Anxa5 protein_coding protein_coding MGP_NODShiLtJ_T0060131.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36618874 36673515 + MGP_NODShiLtJ_P0060131 Fxr1 protein_coding protein_coding MGP_NODShiLtJ_T0060132.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36619764 36673518 + MGP_NODShiLtJ_P0060132 Fxr1 protein_coding protein_coding MGP_NODShiLtJ_T0060133.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36619764 36675788 + MGP_NODShiLtJ_P0060133 Fxr1 protein_coding protein_coding MGP_NODShiLtJ_T0060134.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36619764 36673518 + MGP_NODShiLtJ_P0060134 Fxr1 protein_coding protein_coding MGP_NODShiLtJ_T0060135.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36619764 36673544 + MGP_NODShiLtJ_P0060135 Fxr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060136.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36619764 36673510 + MGP_NODShiLtJ_P0060136 Fxr1 protein_coding protein_coding MGP_NODShiLtJ_T0060137.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36642586 36644720 + Fxr1 protein_coding retained_intron MGP_NODShiLtJ_T0060138.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36642589 36649633 + MGP_NODShiLtJ_P0060138 Fxr1 protein_coding protein_coding MGP_NODShiLtJ_T0060139.1 MGP_NODShiLtJ_G0026962.1 mouse_genomes_project 3 36649727 36652216 + Fxr1 protein_coding retained_intron MGP_NODShiLtJ_T0063658.1 MGP_NODShiLtJ_G0027735.1 mouse_genomes_project 3 158888688 158944219 - MGP_NODShiLtJ_P0063658 Dapp1 protein_coding protein_coding MGP_NODShiLtJ_T0063659.1 MGP_NODShiLtJ_G0027735.1 mouse_genomes_project 3 158888689 158944210 - MGP_NODShiLtJ_P0063659 Dapp1 protein_coding protein_coding MGP_NODShiLtJ_T0063660.1 MGP_NODShiLtJ_G0027735.1 mouse_genomes_project 3 158890384 158915742 - Dapp1 protein_coding processed_transcript MGP_NODShiLtJ_T0063661.1 MGP_NODShiLtJ_G0027735.1 mouse_genomes_project 3 158890687 158914584 - Dapp1 protein_coding processed_transcript MGP_NODShiLtJ_T0063662.1 MGP_NODShiLtJ_G0027735.1 mouse_genomes_project 3 158890798 158944204 - Dapp1 protein_coding processed_transcript MGP_NODShiLtJ_T0063663.1 MGP_NODShiLtJ_G0027735.1 mouse_genomes_project 3 158909590 158914584 - Dapp1 protein_coding processed_transcript MGP_NODShiLtJ_T0063664.1 MGP_NODShiLtJ_G0027735.1 mouse_genomes_project 3 158943378 158944210 - Dapp1 protein_coding retained_intron MGP_NODShiLtJ_T0060748.1 MGP_NODShiLtJ_G0027086.1 mouse_genomes_project 3 73765988 73795997 + MGP_NODShiLtJ_P0060748 Tiparp protein_coding protein_coding MGP_NODShiLtJ_T0099191.1 MGP_NODShiLtJ_G0037585.1 mouse_genomes_project 3 98895629 98895736 + Gm25039 snRNA snRNA MGP_NODShiLtJ_T0061131.1 MGP_NODShiLtJ_G0027180.1 mouse_genomes_project 3 100293407 100392597 + Arhgef11 protein_coding retained_intron MGP_NODShiLtJ_T0061132.1 MGP_NODShiLtJ_G0027180.1 mouse_genomes_project 3 100293423 100433784 + MGP_NODShiLtJ_P0061132 Arhgef11 protein_coding protein_coding MGP_NODShiLtJ_T0061133.1 MGP_NODShiLtJ_G0027180.1 mouse_genomes_project 3 100293433 100431660 + MGP_NODShiLtJ_P0061133 Arhgef11 protein_coding protein_coding MGP_NODShiLtJ_T0061134.1 MGP_NODShiLtJ_G0027180.1 mouse_genomes_project 3 100293440 100411772 + Arhgef11 protein_coding retained_intron MGP_NODShiLtJ_T0061135.1 MGP_NODShiLtJ_G0027180.1 mouse_genomes_project 3 100293949 100433785 + MGP_NODShiLtJ_P0061135 Arhgef11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061136.1 MGP_NODShiLtJ_G0027180.1 mouse_genomes_project 3 100294620 100432853 + MGP_NODShiLtJ_P0061136 Arhgef11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0004342.1 MGP_NODShiLtJ_G0003783.1 mouse_genomes_project 3 166828939 166829534 + Gm34866 antisense antisense MGP_NODShiLtJ_T0001353.1 MGP_NODShiLtJ_G0001273.1 mouse_genomes_project 3 176353481 176354466 + TEC TEC MGP_NODShiLtJ_T0062816.1 MGP_NODShiLtJ_G0027575.1 mouse_genomes_project 3 123463012 123468496 - MGP_NODShiLtJ_P0062816 Gstm7 protein_coding protein_coding MGP_NODShiLtJ_T0062817.1 MGP_NODShiLtJ_G0027575.1 mouse_genomes_project 3 123463385 123468346 - MGP_NODShiLtJ_P0062817 Gstm7 protein_coding protein_coding MGP_NODShiLtJ_T0062818.1 MGP_NODShiLtJ_G0027575.1 mouse_genomes_project 3 123463488 123468293 - MGP_NODShiLtJ_P0062818 Gstm7 protein_coding protein_coding MGP_NODShiLtJ_T0062819.1 MGP_NODShiLtJ_G0027575.1 mouse_genomes_project 3 123465741 123468258 - MGP_NODShiLtJ_P0062819 Gstm7 protein_coding protein_coding MGP_NODShiLtJ_T0062820.1 MGP_NODShiLtJ_G0027575.1 mouse_genomes_project 3 123465810 123468289 - MGP_NODShiLtJ_P0062820 Gstm7 protein_coding protein_coding MGP_NODShiLtJ_T0064160.1 MGP_NODShiLtJ_G0027828.1 mouse_genomes_project 3 181888332 181923382 - MGP_NODShiLtJ_P0064160 Cth protein_coding protein_coding MGP_NODShiLtJ_T0064161.1 MGP_NODShiLtJ_G0027828.1 mouse_genomes_project 3 181888486 181891769 - Cth protein_coding processed_transcript MGP_NODShiLtJ_T0064162.1 MGP_NODShiLtJ_G0027828.1 mouse_genomes_project 3 181891358 181901144 - Cth protein_coding retained_intron MGP_NODShiLtJ_T0064163.1 MGP_NODShiLtJ_G0027828.1 mouse_genomes_project 3 181916366 181923356 - Cth protein_coding retained_intron MGP_NODShiLtJ_T0014227.1 MGP_NODShiLtJ_G0012335.1 mouse_genomes_project 3 162355865 162356229 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010411.1 MGP_NODShiLtJ_G0008544.1 mouse_genomes_project 3 43770932 43771006 + Gm23810 miRNA miRNA MGP_NODShiLtJ_T0007586.1 MGP_NODShiLtJ_G0006201.1 mouse_genomes_project 3 118039665 118040983 + Gm43062 lincRNA lincRNA MGP_NODShiLtJ_T0011428.1 MGP_NODShiLtJ_G0009561.1 mouse_genomes_project 3 47843672 47843968 + Gm25714 misc_RNA misc_RNA MGP_NODShiLtJ_T0063115.1 MGP_NODShiLtJ_G0027640.1 mouse_genomes_project 3 136767190 137875645 + MGP_NODShiLtJ_P0063115 Dpyd protein_coding protein_coding MGP_NODShiLtJ_T0063116.1 MGP_NODShiLtJ_G0027640.1 mouse_genomes_project 3 136767191 137069367 + Dpyd protein_coding retained_intron MGP_NODShiLtJ_T0063117.1 MGP_NODShiLtJ_G0027640.1 mouse_genomes_project 3 136767238 137042726 + Dpyd protein_coding retained_intron MGP_NODShiLtJ_T0063118.1 MGP_NODShiLtJ_G0027640.1 mouse_genomes_project 3 136767241 136909175 + MGP_NODShiLtJ_P0063118 Dpyd protein_coding protein_coding MGP_NODShiLtJ_T0063119.1 MGP_NODShiLtJ_G0027640.1 mouse_genomes_project 3 136767247 136768213 + Dpyd protein_coding retained_intron MGP_NODShiLtJ_T0001286.1 MGP_NODShiLtJ_G0001207.1 mouse_genomes_project 3 145984695 145988750 + TEC TEC MGP_NODShiLtJ_T0061009.1 MGP_NODShiLtJ_G0027150.1 mouse_genomes_project 3 95370621 95612205 + MGP_NODShiLtJ_P0061009 Dchs2 protein_coding protein_coding MGP_NODShiLtJ_T0014133.1 MGP_NODShiLtJ_G0012241.1 mouse_genomes_project 3 128884783 128885645 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007556.1 MGP_NODShiLtJ_G0006174.1 mouse_genomes_project 3 105665430 105676735 + lincRNA lincRNA MGP_NODShiLtJ_T0004222.1 MGP_NODShiLtJ_G0003704.1 mouse_genomes_project 3 101686649 101743546 - antisense antisense MGP_NODShiLtJ_T0014020.1 MGP_NODShiLtJ_G0012128.1 mouse_genomes_project 3 94770217 94770716 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061858.1 MGP_NODShiLtJ_G0027353.1 mouse_genomes_project 3 107099113 107104516 + MGP_NODShiLtJ_P0061858 Rptn protein_coding protein_coding MGP_NODShiLtJ_T0060600.1 MGP_NODShiLtJ_G0027045.1 mouse_genomes_project 3 64804803 64810988 - MGP_NODShiLtJ_P0060600 Pfn2 protein_coding protein_coding MGP_NODShiLtJ_T0060601.1 MGP_NODShiLtJ_G0027045.1 mouse_genomes_project 3 64804813 64810054 - MGP_NODShiLtJ_P0060601 Pfn2 protein_coding protein_coding MGP_NODShiLtJ_T0060602.1 MGP_NODShiLtJ_G0027045.1 mouse_genomes_project 3 64806016 64808787 - MGP_NODShiLtJ_P0060602 Pfn2 protein_coding protein_coding MGP_NODShiLtJ_T0060603.1 MGP_NODShiLtJ_G0027045.1 mouse_genomes_project 3 64807569 64810458 - MGP_NODShiLtJ_P0060603 Pfn2 protein_coding protein_coding MGP_NODShiLtJ_T0004343.1 MGP_NODShiLtJ_G0003784.1 mouse_genomes_project 3 167610395 167612417 - 9530034A14Rik antisense antisense MGP_NODShiLtJ_T0062846.1 MGP_NODShiLtJ_G0027582.1 mouse_genomes_project 3 123651457 123665939 + MGP_NODShiLtJ_P0062846 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062847.1 MGP_NODShiLtJ_G0027582.1 mouse_genomes_project 3 123657555 123661060 + MGP_NODShiLtJ_P0062847 protein_coding protein_coding MGP_NODShiLtJ_T0062848.1 MGP_NODShiLtJ_G0027582.1 mouse_genomes_project 3 123657813 123663553 + MGP_NODShiLtJ_P0062848 protein_coding protein_coding MGP_NODShiLtJ_T0062849.1 MGP_NODShiLtJ_G0027582.1 mouse_genomes_project 3 123657867 123666566 + protein_coding retained_intron MGP_NODShiLtJ_T0062850.1 MGP_NODShiLtJ_G0027582.1 mouse_genomes_project 3 123659123 123663568 + MGP_NODShiLtJ_P0062850 protein_coding protein_coding MGP_NODShiLtJ_T0062851.1 MGP_NODShiLtJ_G0027582.1 mouse_genomes_project 3 123662378 123666427 + protein_coding processed_transcript MGP_NODShiLtJ_T0013985.1 MGP_NODShiLtJ_G0012093.1 mouse_genomes_project 3 78653296 78654176 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013903.1 MGP_NODShiLtJ_G0012011.1 mouse_genomes_project 3 51599719 51599961 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061830.1 MGP_NODShiLtJ_G0027333.1 mouse_genomes_project 3 106348145 106349561 - MGP_NODShiLtJ_P0061830 Gm38119 protein_coding protein_coding MGP_NODShiLtJ_T0060436.1 MGP_NODShiLtJ_G0027012.1 mouse_genomes_project 3 57968218 57990595 + Mgst2 protein_coding processed_transcript MGP_NODShiLtJ_T0060437.1 MGP_NODShiLtJ_G0027012.1 mouse_genomes_project 3 57969036 57985864 + Mgst2 protein_coding processed_transcript MGP_NODShiLtJ_T0060438.1 MGP_NODShiLtJ_G0027012.1 mouse_genomes_project 3 57969037 57991471 + MGP_NODShiLtJ_P0060438 Mgst2 protein_coding protein_coding MGP_NODShiLtJ_T0060439.1 MGP_NODShiLtJ_G0027012.1 mouse_genomes_project 3 57980250 57991460 + Mgst2 protein_coding processed_transcript MGP_NODShiLtJ_T0060440.1 MGP_NODShiLtJ_G0027012.1 mouse_genomes_project 3 57980702 57991307 + Mgst2 protein_coding processed_transcript MGP_NODShiLtJ_T0060441.1 MGP_NODShiLtJ_G0027012.1 mouse_genomes_project 3 57983930 57991462 + Mgst2 protein_coding retained_intron MGP_NODShiLtJ_T0060442.1 MGP_NODShiLtJ_G0027012.1 mouse_genomes_project 3 57990409 57991465 + Mgst2 protein_coding retained_intron MGP_NODShiLtJ_T0014057.1 MGP_NODShiLtJ_G0012165.1 mouse_genomes_project 3 107126954 107127737 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013919.1 MGP_NODShiLtJ_G0012027.1 mouse_genomes_project 3 56879601 56879977 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014129.1 MGP_NODShiLtJ_G0012237.1 mouse_genomes_project 3 127416632 127418160 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060064.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 34995375 35049699 + MGP_NODShiLtJ_P0060064 Mfn1 protein_coding protein_coding MGP_NODShiLtJ_T0060065.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 34995441 35014035 + Mfn1 protein_coding retained_intron MGP_NODShiLtJ_T0060066.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 34995449 35013748 + MGP_NODShiLtJ_P0060066 Mfn1 protein_coding protein_coding MGP_NODShiLtJ_T0060067.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 34997442 35011186 + MGP_NODShiLtJ_P0060067 Mfn1 protein_coding protein_coding MGP_NODShiLtJ_T0060068.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 34997451 35047817 + MGP_NODShiLtJ_P0060068 Mfn1 protein_coding protein_coding MGP_NODShiLtJ_T0060069.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 35013583 35032826 + Mfn1 protein_coding retained_intron MGP_NODShiLtJ_T0060070.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 35023842 35033095 + Mfn1 protein_coding retained_intron MGP_NODShiLtJ_T0060071.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 35031238 35040018 + MGP_NODShiLtJ_P0060071 Mfn1 protein_coding protein_coding MGP_NODShiLtJ_T0060072.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 35032599 35033493 + Mfn1 protein_coding retained_intron MGP_NODShiLtJ_T0060073.1 MGP_NODShiLtJ_G0026953.1 mouse_genomes_project 3 35043870 35047621 + Mfn1 protein_coding retained_intron MGP_NODShiLtJ_T0098373.1 MGP_NODShiLtJ_G0036778.1 mouse_genomes_project 3 166483844 166487031 - Gm43707 sense_intronic sense_intronic MGP_NODShiLtJ_T0099193.1 MGP_NODShiLtJ_G0037587.1 mouse_genomes_project 3 101783614 101783776 + Gm23054 snRNA snRNA MGP_NODShiLtJ_T0007384.1 MGP_NODShiLtJ_G0006050.1 mouse_genomes_project 3 3153190 3155608 - 4930555M17Rik lincRNA lincRNA MGP_NODShiLtJ_T0010422.1 MGP_NODShiLtJ_G0008555.1 mouse_genomes_project 3 100969863 100969950 + Mir3093 miRNA miRNA MGP_NODShiLtJ_T0060355.1 MGP_NODShiLtJ_G0026999.1 mouse_genomes_project 3 44885942 45031599 - MGP_NODShiLtJ_P0060355 Sclt1 protein_coding protein_coding MGP_NODShiLtJ_T0060356.1 MGP_NODShiLtJ_G0026999.1 mouse_genomes_project 3 44887182 45031566 - MGP_NODShiLtJ_P0060356 Sclt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060357.1 MGP_NODShiLtJ_G0026999.1 mouse_genomes_project 3 44887182 45031113 - MGP_NODShiLtJ_P0060357 Sclt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060358.1 MGP_NODShiLtJ_G0026999.1 mouse_genomes_project 3 44887346 44890366 - Sclt1 protein_coding retained_intron MGP_NODShiLtJ_T0060359.1 MGP_NODShiLtJ_G0026999.1 mouse_genomes_project 3 44889642 44939418 - Sclt1 protein_coding retained_intron MGP_NODShiLtJ_T0060360.1 MGP_NODShiLtJ_G0026999.1 mouse_genomes_project 3 44920854 44929231 - MGP_NODShiLtJ_P0060360 Sclt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060361.1 MGP_NODShiLtJ_G0026999.1 mouse_genomes_project 3 44939926 44997295 - Sclt1 protein_coding retained_intron MGP_NODShiLtJ_T0060362.1 MGP_NODShiLtJ_G0026999.1 mouse_genomes_project 3 45030603 45031490 - Sclt1 protein_coding retained_intron MGP_NODShiLtJ_T0001274.1 MGP_NODShiLtJ_G0001195.1 mouse_genomes_project 3 140411823 140416884 - TEC TEC MGP_NODShiLtJ_T0007472.1 MGP_NODShiLtJ_G0006114.1 mouse_genomes_project 3 54555707 54571878 - Gm37190 lincRNA lincRNA MGP_NODShiLtJ_T0061477.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102201074 102213724 + MGP_NODShiLtJ_P0061477 Thbs3 protein_coding protein_coding MGP_NODShiLtJ_T0061478.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102201099 102205067 + MGP_NODShiLtJ_P0061478 Thbs3 protein_coding protein_coding MGP_NODShiLtJ_T0061479.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102201121 102213724 + Thbs3 protein_coding retained_intron MGP_NODShiLtJ_T0061480.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102201127 102213691 + MGP_NODShiLtJ_P0061480 Thbs3 protein_coding protein_coding MGP_NODShiLtJ_T0061481.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102204401 102206069 + Thbs3 protein_coding retained_intron MGP_NODShiLtJ_T0061482.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102208038 102210063 + Thbs3 protein_coding processed_transcript MGP_NODShiLtJ_T0061484.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102211026 102212444 + Thbs3 protein_coding retained_intron MGP_NODShiLtJ_T0061485.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102211175 102213590 + MGP_NODShiLtJ_P0061485 Thbs3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061486.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102211216 102212312 + Thbs3 protein_coding retained_intron MGP_NODShiLtJ_T0061487.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102212063 102213450 + Thbs3 protein_coding retained_intron MGP_NODShiLtJ_T0061488.1 MGP_NODShiLtJ_G0027238.1 mouse_genomes_project 3 102213136 102213673 + Thbs3 protein_coding retained_intron MGP_NODShiLtJ_T0061804.1 MGP_NODShiLtJ_G0027310.1 mouse_genomes_project 3 105887499 105888755 + MGP_NODShiLtJ_P0061804 Sprr2f protein_coding protein_coding MGP_NODShiLtJ_T0062251.1 MGP_NODShiLtJ_G0027434.1 mouse_genomes_project 3 110618688 110652294 - MGP_NODShiLtJ_P0062251 BC107364 protein_coding protein_coding MGP_NODShiLtJ_T0062252.1 MGP_NODShiLtJ_G0027434.1 mouse_genomes_project 3 110618688 110652294 - MGP_NODShiLtJ_P0062252 BC107364 protein_coding protein_coding MGP_NODShiLtJ_T0061831.1 MGP_NODShiLtJ_G0027334.1 mouse_genomes_project 3 106361031 106363456 - MGP_NODShiLtJ_P0061831 Lce1g protein_coding protein_coding MGP_NODShiLtJ_T0001320.1 MGP_NODShiLtJ_G0001240.1 mouse_genomes_project 3 150981738 150983117 + TEC TEC MGP_NODShiLtJ_T0007488.1 MGP_NODShiLtJ_G0006128.1 mouse_genomes_project 3 61234486 61237670 + Gm26678 lincRNA lincRNA MGP_NODShiLtJ_T0001150.1 MGP_NODShiLtJ_G0001073.1 mouse_genomes_project 3 56852051 56853383 - TEC TEC MGP_NODShiLtJ_T0098369.1 MGP_NODShiLtJ_G0036774.1 mouse_genomes_project 3 121273063 121274586 - Gm42721 sense_intronic sense_intronic MGP_NODShiLtJ_T0098337.1 MGP_NODShiLtJ_G0036742.1 mouse_genomes_project 3 117364893 117367799 + Gm42679 sense_intronic sense_intronic MGP_NODShiLtJ_T0007449.1 MGP_NODShiLtJ_G0006100.1 mouse_genomes_project 3 40926042 41021283 + lincRNA lincRNA MGP_NODShiLtJ_T0010461.1 MGP_NODShiLtJ_G0008594.1 mouse_genomes_project 3 161325415 161325537 + Mir7j miRNA miRNA MGP_NODShiLtJ_T0001130.1 MGP_NODShiLtJ_G0001053.1 mouse_genomes_project 3 40638143 40641653 + TEC TEC MGP_NODShiLtJ_T0060175.1 MGP_NODShiLtJ_G0026969.1 mouse_genomes_project 3 38859435 38886704 + MGP_NODShiLtJ_P0060175 Acad9 protein_coding protein_coding MGP_NODShiLtJ_T0060176.1 MGP_NODShiLtJ_G0026969.1 mouse_genomes_project 3 38859523 38868012 + MGP_NODShiLtJ_P0060176 Acad9 protein_coding protein_coding MGP_NODShiLtJ_T0060177.1 MGP_NODShiLtJ_G0026969.1 mouse_genomes_project 3 38859528 38883079 + Acad9 protein_coding retained_intron MGP_NODShiLtJ_T0060178.1 MGP_NODShiLtJ_G0026969.1 mouse_genomes_project 3 38868760 38872698 + Acad9 protein_coding retained_intron MGP_NODShiLtJ_T0060179.1 MGP_NODShiLtJ_G0026969.1 mouse_genomes_project 3 38870443 38880871 + MGP_NODShiLtJ_P0060179 Acad9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060180.1 MGP_NODShiLtJ_G0026969.1 mouse_genomes_project 3 38872137 38880523 + Acad9 protein_coding retained_intron MGP_NODShiLtJ_T0060181.1 MGP_NODShiLtJ_G0026969.1 mouse_genomes_project 3 38872212 38883079 + Acad9 protein_coding retained_intron MGP_NODShiLtJ_T0059813.1 MGP_NODShiLtJ_G0026905.1 mouse_genomes_project 3 19872906 19903758 + MGP_NODShiLtJ_P0059813 Mtfr1 protein_coding protein_coding MGP_NODShiLtJ_T0059814.1 MGP_NODShiLtJ_G0026905.1 mouse_genomes_project 3 19872908 19907784 + MGP_NODShiLtJ_P0059814 Mtfr1 protein_coding protein_coding MGP_NODShiLtJ_T0059815.1 MGP_NODShiLtJ_G0026905.1 mouse_genomes_project 3 19872926 19907435 + MGP_NODShiLtJ_P0059815 Mtfr1 protein_coding protein_coding MGP_NODShiLtJ_T0059816.1 MGP_NODShiLtJ_G0026905.1 mouse_genomes_project 3 19873689 19914435 + MGP_NODShiLtJ_P0059816 Mtfr1 protein_coding protein_coding MGP_NODShiLtJ_T0059817.1 MGP_NODShiLtJ_G0026905.1 mouse_genomes_project 3 19873844 19907621 + MGP_NODShiLtJ_P0059817 Mtfr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059818.1 MGP_NODShiLtJ_G0026905.1 mouse_genomes_project 3 19873853 19903767 + MGP_NODShiLtJ_P0059818 Mtfr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059819.1 MGP_NODShiLtJ_G0026905.1 mouse_genomes_project 3 19873893 19899616 + MGP_NODShiLtJ_P0059819 Mtfr1 protein_coding protein_coding MGP_NODShiLtJ_T0059820.1 MGP_NODShiLtJ_G0026905.1 mouse_genomes_project 3 19899636 19904285 + Mtfr1 protein_coding retained_intron MGP_NODShiLtJ_T0007434.1 MGP_NODShiLtJ_G0006087.1 mouse_genomes_project 3 37119355 37120135 - Gm29135 lincRNA lincRNA MGP_NODShiLtJ_T0001141.1 MGP_NODShiLtJ_G0001064.1 mouse_genomes_project 3 45516984 45520758 + TEC TEC MGP_NODShiLtJ_T0001153.1 MGP_NODShiLtJ_G0001076.1 mouse_genomes_project 3 57131674 57135452 - TEC TEC MGP_NODShiLtJ_T0014003.1 MGP_NODShiLtJ_G0012111.1 mouse_genomes_project 3 86878151 86878942 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062693.1 MGP_NODShiLtJ_G0027541.1 mouse_genomes_project 3 121210741 121228175 - MGP_NODShiLtJ_P0062693 Atp5f1 protein_coding protein_coding MGP_NODShiLtJ_T0062694.1 MGP_NODShiLtJ_G0027541.1 mouse_genomes_project 3 121210745 121227352 - MGP_NODShiLtJ_P0062694 Atp5f1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062695.1 MGP_NODShiLtJ_G0027541.1 mouse_genomes_project 3 121210941 121222257 - MGP_NODShiLtJ_P0062695 Atp5f1 protein_coding protein_coding MGP_NODShiLtJ_T0062696.1 MGP_NODShiLtJ_G0027541.1 mouse_genomes_project 3 121221744 121227340 - Atp5f1 protein_coding retained_intron MGP_NODShiLtJ_T0062697.1 MGP_NODShiLtJ_G0027541.1 mouse_genomes_project 3 121221902 121224082 - Atp5f1 protein_coding retained_intron MGP_NODShiLtJ_T0062698.1 MGP_NODShiLtJ_G0027541.1 mouse_genomes_project 3 121226666 121227322 - Atp5f1 protein_coding retained_intron MGP_NODShiLtJ_T0060447.1 MGP_NODShiLtJ_G0027015.1 mouse_genomes_project 3 59400658 59436691 - MGP_NODShiLtJ_P0060447 Cog6 protein_coding protein_coding MGP_NODShiLtJ_T0060448.1 MGP_NODShiLtJ_G0027015.1 mouse_genomes_project 3 59400905 59414172 - Cog6 protein_coding retained_intron MGP_NODShiLtJ_T0060449.1 MGP_NODShiLtJ_G0027015.1 mouse_genomes_project 3 59403499 59436670 - MGP_NODShiLtJ_P0060449 Cog6 protein_coding protein_coding MGP_NODShiLtJ_T0060450.1 MGP_NODShiLtJ_G0027015.1 mouse_genomes_project 3 59412226 59436672 - MGP_NODShiLtJ_P0060450 Cog6 protein_coding protein_coding MGP_NODShiLtJ_T0060451.1 MGP_NODShiLtJ_G0027015.1 mouse_genomes_project 3 59415269 59436664 - Cog6 protein_coding retained_intron MGP_NODShiLtJ_T0060452.1 MGP_NODShiLtJ_G0027015.1 mouse_genomes_project 3 59429811 59436666 - Cog6 protein_coding retained_intron MGP_NODShiLtJ_T0013993.1 MGP_NODShiLtJ_G0012101.1 mouse_genomes_project 3 81187337 81188302 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098367.1 MGP_NODShiLtJ_G0036772.1 mouse_genomes_project 3 121034034 121036848 - Gm43330 sense_intronic sense_intronic MGP_NODShiLtJ_T0001087.1 MGP_NODShiLtJ_G0001010.1 mouse_genomes_project 3 9365720 9367540 + TEC TEC MGP_NODShiLtJ_T0007417.1 MGP_NODShiLtJ_G0006071.1 mouse_genomes_project 3 22987738 22988503 - Gm43674 lincRNA lincRNA MGP_NODShiLtJ_T0007420.1 MGP_NODShiLtJ_G0006074.1 mouse_genomes_project 3 24181185 24184154 + Gm37021 lincRNA lincRNA MGP_NODShiLtJ_T0014052.1 MGP_NODShiLtJ_G0012160.1 mouse_genomes_project 3 106780278 106780410 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062981.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125514272 125907978 - MGP_NODShiLtJ_P0062981 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0062982.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125514275 125908834 - MGP_NODShiLtJ_P0062982 Ntng1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062983.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125514278 125908985 - MGP_NODShiLtJ_P0062983 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0062984.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125515347 125908449 - MGP_NODShiLtJ_P0062984 Ntng1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062985.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125516914 125900509 - MGP_NODShiLtJ_P0062985 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0062986.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125516914 125900509 - MGP_NODShiLtJ_P0062986 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0062987.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125516914 125900509 - MGP_NODShiLtJ_P0062987 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0062988.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125516914 125900509 - MGP_NODShiLtJ_P0062988 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0062989.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125516914 125900509 - MGP_NODShiLtJ_P0062989 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0062990.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125516914 125900509 - MGP_NODShiLtJ_P0062990 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0062991.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125568294 125571785 - Ntng1 protein_coding retained_intron MGP_NODShiLtJ_T0062992.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125568294 125900469 - Ntng1 protein_coding retained_intron MGP_NODShiLtJ_T0062993.1 MGP_NODShiLtJ_G0027612.1 mouse_genomes_project 3 125908658 125908985 - MGP_NODShiLtJ_P0062993 Ntng1 protein_coding protein_coding MGP_NODShiLtJ_T0010402.1 MGP_NODShiLtJ_G0008535.1 mouse_genomes_project 3 31870864 31870972 + Mir21b miRNA miRNA MGP_NODShiLtJ_T0010445.1 MGP_NODShiLtJ_G0008578.1 mouse_genomes_project 3 136595646 136595719 + Mir137 miRNA miRNA MGP_NODShiLtJ_T0060643.1 MGP_NODShiLtJ_G0027057.1 mouse_genomes_project 3 66366731 66369722 - MGP_NODShiLtJ_P0060643 P2ry13 protein_coding protein_coding MGP_NODShiLtJ_T0062821.1 MGP_NODShiLtJ_G0027576.1 mouse_genomes_project 3 123475490 123480284 - MGP_NODShiLtJ_P0062821 Gstm6 protein_coding protein_coding MGP_NODShiLtJ_T0062822.1 MGP_NODShiLtJ_G0027576.1 mouse_genomes_project 3 123475498 123480385 - MGP_NODShiLtJ_P0062822 Gstm6 protein_coding protein_coding MGP_NODShiLtJ_T0062823.1 MGP_NODShiLtJ_G0027576.1 mouse_genomes_project 3 123475756 123480034 - MGP_NODShiLtJ_P0062823 Gstm6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062824.1 MGP_NODShiLtJ_G0027576.1 mouse_genomes_project 3 123478468 123480366 - Gstm6 protein_coding processed_transcript MGP_NODShiLtJ_T0063104.1 MGP_NODShiLtJ_G0027636.1 mouse_genomes_project 3 134861812 134880659 + MGP_NODShiLtJ_P0063104 4930455H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0014111.1 MGP_NODShiLtJ_G0012219.1 mouse_genomes_project 3 121309599 121310067 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061143.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100443584 100466907 - MGP_NODShiLtJ_P0061143 Pear1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061144.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100444788 100466912 - MGP_NODShiLtJ_P0061144 Pear1 protein_coding protein_coding MGP_NODShiLtJ_T0061145.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100444788 100526740 - MGP_NODShiLtJ_P0061145 Pear1 protein_coding protein_coding MGP_NODShiLtJ_T0061146.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100444788 100526689 - MGP_NODShiLtJ_P0061146 Pear1 protein_coding protein_coding MGP_NODShiLtJ_T0061147.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100444789 100460084 - Pear1 protein_coding retained_intron MGP_NODShiLtJ_T0061148.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100444789 100466902 - MGP_NODShiLtJ_P0061148 Pear1 protein_coding protein_coding MGP_NODShiLtJ_T0061149.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100444789 100466908 - MGP_NODShiLtJ_P0061149 Pear1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061150.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100444797 100450008 - Pear1 protein_coding retained_intron MGP_NODShiLtJ_T0061151.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100445591 100466902 - MGP_NODShiLtJ_P0061151 Pear1 protein_coding protein_coding MGP_NODShiLtJ_T0061152.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100447146 100449637 - MGP_NODShiLtJ_P0061152 Pear1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061153.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100448127 100453438 - MGP_NODShiLtJ_P0061153 Pear1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061154.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100453136 100466902 - MGP_NODShiLtJ_P0061154 Pear1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061155.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100454443 100466914 - Pear1 protein_coding retained_intron MGP_NODShiLtJ_T0061156.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100454883 100466902 - MGP_NODShiLtJ_P0061156 Pear1 protein_coding protein_coding MGP_NODShiLtJ_T0061157.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100454896 100466902 - MGP_NODShiLtJ_P0061157 Pear1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0061158.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100454910 100466925 - MGP_NODShiLtJ_P0061158 Pear1 protein_coding protein_coding MGP_NODShiLtJ_T0061159.1 MGP_NODShiLtJ_G0027182.1 mouse_genomes_project 3 100457275 100466894 - MGP_NODShiLtJ_P0061159 Pear1 protein_coding protein_coding MGP_NODShiLtJ_T0007507.1 MGP_NODShiLtJ_G0006142.1 mouse_genomes_project 3 79619768 79661009 - Gm6634 lincRNA lincRNA MGP_NODShiLtJ_T0014183.1 MGP_NODShiLtJ_G0012291.1 mouse_genomes_project 3 150109904 150110255 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013908.1 MGP_NODShiLtJ_G0012016.1 mouse_genomes_project 3 53508648 53509398 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004226.1 MGP_NODShiLtJ_G0003708.1 mouse_genomes_project 3 102386945 102395111 + Gm15417 antisense antisense MGP_NODShiLtJ_T0004227.1 MGP_NODShiLtJ_G0003708.1 mouse_genomes_project 3 102387065 102395111 + Gm15417 antisense antisense MGP_NODShiLtJ_T0004228.1 MGP_NODShiLtJ_G0003708.1 mouse_genomes_project 3 102392920 102395033 + Gm15417 antisense antisense MGP_NODShiLtJ_T0062680.1 MGP_NODShiLtJ_G0027538.1 mouse_genomes_project 3 121132637 121172326 + MGP_NODShiLtJ_P0062680 Adora3 protein_coding protein_coding MGP_NODShiLtJ_T0062685.1 MGP_NODShiLtJ_G0027538.1 mouse_genomes_project 3 121168376 121172899 + MGP_NODShiLtJ_P0062685 Adora3 protein_coding protein_coding MGP_NODShiLtJ_T0062687.1 MGP_NODShiLtJ_G0027538.1 mouse_genomes_project 3 121168650 121170330 + Adora3 protein_coding retained_intron MGP_NODShiLtJ_T0013809.1 MGP_NODShiLtJ_G0011917.1 mouse_genomes_project 3 13516054 13517411 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100489.1 MGP_NODShiLtJ_G0038883.1 mouse_genomes_project 3 138103624 138103755 - Gm23432 snoRNA snoRNA MGP_NODShiLtJ_T0059872.1 MGP_NODShiLtJ_G0026914.1 mouse_genomes_project 3 20908847 20942641 - MGP_NODShiLtJ_P0059872 Gyg protein_coding protein_coding MGP_NODShiLtJ_T0059873.1 MGP_NODShiLtJ_G0026914.1 mouse_genomes_project 3 20908850 20942420 - MGP_NODShiLtJ_P0059873 Gyg protein_coding protein_coding MGP_NODShiLtJ_T0059874.1 MGP_NODShiLtJ_G0026914.1 mouse_genomes_project 3 20908910 20942393 - MGP_NODShiLtJ_P0059874 Gyg protein_coding protein_coding MGP_NODShiLtJ_T0059875.1 MGP_NODShiLtJ_G0026914.1 mouse_genomes_project 3 20909319 20910307 - Gyg protein_coding retained_intron MGP_NODShiLtJ_T0007636.1 MGP_NODShiLtJ_G0006240.1 mouse_genomes_project 3 150798752 150799738 + Gm42997 lincRNA lincRNA MGP_NODShiLtJ_T0007637.1 MGP_NODShiLtJ_G0006240.1 mouse_genomes_project 3 150798893 150848366 + Gm42997 lincRNA lincRNA MGP_NODShiLtJ_T0007664.1 MGP_NODShiLtJ_G0006265.1 mouse_genomes_project 3 162166372 162239357 - lincRNA lincRNA MGP_NODShiLtJ_T0007665.1 MGP_NODShiLtJ_G0006265.1 mouse_genomes_project 3 162238716 162239357 - lincRNA lincRNA MGP_NODShiLtJ_T0001114.1 MGP_NODShiLtJ_G0001037.1 mouse_genomes_project 3 35585613 35588051 - TEC TEC MGP_NODShiLtJ_T0063015.1 MGP_NODShiLtJ_G0027619.1 mouse_genomes_project 3 133635047 133664574 + MGP_NODShiLtJ_P0063015 Dph5 protein_coding protein_coding MGP_NODShiLtJ_T0063016.1 MGP_NODShiLtJ_G0027619.1 mouse_genomes_project 3 133635062 133635690 + MGP_NODShiLtJ_P0063016 Dph5 protein_coding protein_coding MGP_NODShiLtJ_T0063017.1 MGP_NODShiLtJ_G0027619.1 mouse_genomes_project 3 133635357 133647622 + MGP_NODShiLtJ_P0063017 Dph5 protein_coding protein_coding MGP_NODShiLtJ_T0063018.1 MGP_NODShiLtJ_G0027619.1 mouse_genomes_project 3 133635375 133669796 + MGP_NODShiLtJ_P0063018 Dph5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0063019.1 MGP_NODShiLtJ_G0027619.1 mouse_genomes_project 3 133635383 133648987 + MGP_NODShiLtJ_P0063019 Dph5 protein_coding protein_coding MGP_NODShiLtJ_T0063020.1 MGP_NODShiLtJ_G0027619.1 mouse_genomes_project 3 133635393 133664776 + MGP_NODShiLtJ_P0063020 Dph5 protein_coding protein_coding MGP_NODShiLtJ_T0063021.1 MGP_NODShiLtJ_G0027619.1 mouse_genomes_project 3 133635404 133639486 + Dph5 protein_coding retained_intron MGP_NODShiLtJ_T0063022.1 MGP_NODShiLtJ_G0027619.1 mouse_genomes_project 3 133635405 133640201 + Dph5 protein_coding retained_intron MGP_NODShiLtJ_T0098312.1 MGP_NODShiLtJ_G0036718.1 mouse_genomes_project 3 27402889 27419032 - sense_intronic sense_intronic MGP_NODShiLtJ_T0061065.1 MGP_NODShiLtJ_G0027163.1 mouse_genomes_project 3 97999465 98080581 + MGP_NODShiLtJ_P0061065 Gatb protein_coding protein_coding MGP_NODShiLtJ_T0061066.1 MGP_NODShiLtJ_G0027163.1 mouse_genomes_project 3 97999465 98071538 + MGP_NODShiLtJ_P0061066 Gatb protein_coding protein_coding MGP_NODShiLtJ_T0061067.1 MGP_NODShiLtJ_G0027163.1 mouse_genomes_project 3 97999473 98077792 + MGP_NODShiLtJ_P0061067 Gatb protein_coding protein_coding MGP_NODShiLtJ_T0061068.1 MGP_NODShiLtJ_G0027163.1 mouse_genomes_project 3 97999478 98001407 + Gatb protein_coding processed_transcript MGP_NODShiLtJ_T0061069.1 MGP_NODShiLtJ_G0027163.1 mouse_genomes_project 3 97999490 98078811 + MGP_NODShiLtJ_P0061069 Gatb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061070.1 MGP_NODShiLtJ_G0027163.1 mouse_genomes_project 3 97999541 98079117 + Gatb protein_coding processed_transcript MGP_NODShiLtJ_T0062681.1 MGP_NODShiLtJ_G0027539.1 mouse_genomes_project 3 121132682 121134412 + Tmigd3 protein_coding processed_transcript MGP_NODShiLtJ_T0062682.1 MGP_NODShiLtJ_G0027539.1 mouse_genomes_project 3 121132686 121189342 + MGP_NODShiLtJ_P0062682 Tmigd3 protein_coding protein_coding MGP_NODShiLtJ_T0062683.1 MGP_NODShiLtJ_G0027539.1 mouse_genomes_project 3 121132686 121189261 + MGP_NODShiLtJ_P0062683 Tmigd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062684.1 MGP_NODShiLtJ_G0027539.1 mouse_genomes_project 3 121132756 121133642 + Tmigd3 protein_coding processed_transcript MGP_NODShiLtJ_T0062686.1 MGP_NODShiLtJ_G0027539.1 mouse_genomes_project 3 121168438 121182725 + MGP_NODShiLtJ_P0062686 Tmigd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062688.1 MGP_NODShiLtJ_G0027539.1 mouse_genomes_project 3 121178076 121189345 + MGP_NODShiLtJ_P0062688 Tmigd3 protein_coding protein_coding MGP_NODShiLtJ_T0062689.1 MGP_NODShiLtJ_G0027539.1 mouse_genomes_project 3 121178076 121189348 + MGP_NODShiLtJ_P0062689 Tmigd3 protein_coding protein_coding MGP_NODShiLtJ_T0100479.1 MGP_NODShiLtJ_G0038873.1 mouse_genomes_project 3 114991792 114991869 + Gm25802 snoRNA snoRNA MGP_NODShiLtJ_T0059940.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306104 30743799 + MGP_NODShiLtJ_P0059940 Tnik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0059941.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306105 30749072 + MGP_NODShiLtJ_P0059941 Tnik protein_coding protein_coding MGP_NODShiLtJ_T0059942.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306166 30407248 + Tnik protein_coding retained_intron MGP_NODShiLtJ_T0059943.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306166 30559452 + Tnik protein_coding retained_intron MGP_NODShiLtJ_T0059944.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306453 30739667 + Tnik protein_coding retained_intron MGP_NODShiLtJ_T0059945.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306453 30741437 + MGP_NODShiLtJ_P0059945 Tnik protein_coding protein_coding MGP_NODShiLtJ_T0059946.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306453 30741437 + MGP_NODShiLtJ_P0059946 Tnik protein_coding protein_coding MGP_NODShiLtJ_T0059947.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306472 30307751 + Tnik protein_coding retained_intron MGP_NODShiLtJ_T0059948.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306533 30741196 + MGP_NODShiLtJ_P0059948 Tnik protein_coding protein_coding MGP_NODShiLtJ_T0059949.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306533 30741196 + MGP_NODShiLtJ_P0059949 Tnik protein_coding protein_coding MGP_NODShiLtJ_T0059950.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306533 30741196 + MGP_NODShiLtJ_P0059950 Tnik protein_coding protein_coding MGP_NODShiLtJ_T0059951.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306533 30741196 + MGP_NODShiLtJ_P0059951 Tnik protein_coding protein_coding MGP_NODShiLtJ_T0059952.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30306533 30741196 + MGP_NODShiLtJ_P0059952 Tnik protein_coding protein_coding MGP_NODShiLtJ_T0059953.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30463430 30666506 + Tnik protein_coding processed_transcript MGP_NODShiLtJ_T0059954.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30599255 30601070 + Tnik protein_coding retained_intron MGP_NODShiLtJ_T0059955.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30700717 30709236 + Tnik protein_coding retained_intron MGP_NODShiLtJ_T0059956.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30722441 30739163 + Tnik protein_coding retained_intron MGP_NODShiLtJ_T0059957.1 MGP_NODShiLtJ_G0026929.1 mouse_genomes_project 3 30740059 30741963 + Tnik protein_coding retained_intron MGP_NODShiLtJ_T0001264.1 MGP_NODShiLtJ_G0001185.1 mouse_genomes_project 3 134403287 134405641 - TEC TEC MGP_NODShiLtJ_T0062220.1 MGP_NODShiLtJ_G0027422.1 mouse_genomes_project 3 110246481 110309778 + MGP_NODShiLtJ_P0062220 Otud7b protein_coding protein_coding MGP_NODShiLtJ_T0062221.1 MGP_NODShiLtJ_G0027422.1 mouse_genomes_project 3 110246481 110309778 + MGP_NODShiLtJ_P0062221 Otud7b protein_coding protein_coding MGP_NODShiLtJ_T0062222.1 MGP_NODShiLtJ_G0027422.1 mouse_genomes_project 3 110246481 110288817 + MGP_NODShiLtJ_P0062222 Otud7b protein_coding protein_coding MGP_NODShiLtJ_T0062223.1 MGP_NODShiLtJ_G0027422.1 mouse_genomes_project 3 110246481 110291626 + MGP_NODShiLtJ_P0062223 Otud7b protein_coding protein_coding MGP_NODShiLtJ_T0062224.1 MGP_NODShiLtJ_G0027422.1 mouse_genomes_project 3 110246500 110277301 + Otud7b protein_coding processed_transcript MGP_NODShiLtJ_T0062225.1 MGP_NODShiLtJ_G0027422.1 mouse_genomes_project 3 110246502 110288852 + Otud7b protein_coding processed_transcript MGP_NODShiLtJ_T0062226.1 MGP_NODShiLtJ_G0027422.1 mouse_genomes_project 3 110249043 110309778 + MGP_NODShiLtJ_P0062226 Otud7b protein_coding protein_coding MGP_NODShiLtJ_T0062227.1 MGP_NODShiLtJ_G0027422.1 mouse_genomes_project 3 110298009 110299869 + Otud7b protein_coding processed_transcript MGP_NODShiLtJ_T0001099.1 MGP_NODShiLtJ_G0001022.1 mouse_genomes_project 3 31349911 31352011 + TEC TEC MGP_NODShiLtJ_T0061685.1 MGP_NODShiLtJ_G0027272.1 mouse_genomes_project 3 103358216 103363563 + MGP_NODShiLtJ_P0061685 Jtb protein_coding protein_coding MGP_NODShiLtJ_T0061686.1 MGP_NODShiLtJ_G0027272.1 mouse_genomes_project 3 103358231 103363268 + MGP_NODShiLtJ_P0061686 Jtb protein_coding protein_coding MGP_NODShiLtJ_T0061687.1 MGP_NODShiLtJ_G0027272.1 mouse_genomes_project 3 103358253 103363143 + Jtb protein_coding retained_intron MGP_NODShiLtJ_T0061688.1 MGP_NODShiLtJ_G0027272.1 mouse_genomes_project 3 103358666 103361660 + Jtb protein_coding retained_intron MGP_NODShiLtJ_T0101336.1 MGP_NODShiLtJ_G0039576.1 mouse_genomes_project 3 72936597 72936830 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0099240.1 MGP_NODShiLtJ_G0037634.1 mouse_genomes_project 3 184275608 184275715 - Gm23941 snRNA snRNA MGP_NODShiLtJ_T0062607.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119024557 119063666 + MGP_NODShiLtJ_P0062607 Phtf1 protein_coding protein_coding MGP_NODShiLtJ_T0062608.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119024705 119063666 + MGP_NODShiLtJ_P0062608 Phtf1 protein_coding protein_coding MGP_NODShiLtJ_T0062609.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119024813 119080521 + MGP_NODShiLtJ_P0062609 Phtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062610.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119024815 119063668 + MGP_NODShiLtJ_P0062610 Phtf1 protein_coding protein_coding MGP_NODShiLtJ_T0062611.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119024819 119063666 + Phtf1 protein_coding retained_intron MGP_NODShiLtJ_T0062612.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119024821 119047251 + MGP_NODShiLtJ_P0062612 Phtf1 protein_coding protein_coding MGP_NODShiLtJ_T0062613.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119024893 119063668 + MGP_NODShiLtJ_P0062613 Phtf1 protein_coding protein_coding MGP_NODShiLtJ_T0062614.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119025035 119043685 + MGP_NODShiLtJ_P0062614 Phtf1 protein_coding protein_coding MGP_NODShiLtJ_T0062615.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119025372 119053699 + MGP_NODShiLtJ_P0062615 Phtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062616.1 MGP_NODShiLtJ_G0027521.1 mouse_genomes_project 3 119052597 119053743 + Phtf1 protein_coding retained_intron MGP_NODShiLtJ_T0060793.1 MGP_NODShiLtJ_G0027095.1 mouse_genomes_project 3 75886053 75938396 + MGP_NODShiLtJ_P0060793 Gfm1 protein_coding protein_coding MGP_NODShiLtJ_T0060794.1 MGP_NODShiLtJ_G0027095.1 mouse_genomes_project 3 75886073 75920663 + Gfm1 protein_coding processed_transcript MGP_NODShiLtJ_T0060795.1 MGP_NODShiLtJ_G0027095.1 mouse_genomes_project 3 75886196 75919907 + MGP_NODShiLtJ_P0060795 Gfm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0060796.1 MGP_NODShiLtJ_G0027095.1 mouse_genomes_project 3 75918340 75936672 + Gfm1 protein_coding retained_intron MGP_NODShiLtJ_T0059931.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 29962749 29971621 + Pld1 protein_coding processed_transcript MGP_NODShiLtJ_T0059932.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 29962750 30050783 + MGP_NODShiLtJ_P0059932 Pld1 protein_coding protein_coding MGP_NODShiLtJ_T0059933.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 30001755 30158090 + MGP_NODShiLtJ_P0059933 Pld1 protein_coding protein_coding MGP_NODShiLtJ_T0059934.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 30041593 30159278 + MGP_NODShiLtJ_P0059934 Pld1 protein_coding protein_coding MGP_NODShiLtJ_T0059935.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 30053357 30159402 + MGP_NODShiLtJ_P0059935 Pld1 protein_coding protein_coding MGP_NODShiLtJ_T0059936.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 30063299 30071041 + Pld1 protein_coding processed_transcript MGP_NODShiLtJ_T0059937.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 30088088 30104764 + Pld1 protein_coding retained_intron MGP_NODShiLtJ_T0059938.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 30097267 30100586 + Pld1 protein_coding retained_intron MGP_NODShiLtJ_T0059939.1 MGP_NODShiLtJ_G0026928.1 mouse_genomes_project 3 30131273 30156835 + MGP_NODShiLtJ_P0059939 Pld1 protein_coding protein_coding MGP_NODShiLtJ_T0060728.1 MGP_NODShiLtJ_G0027076.1 mouse_genomes_project 3 71908889 71970764 + MGP_NODShiLtJ_P0060728 Gmps protein_coding protein_coding MGP_NODShiLtJ_T0060729.1 MGP_NODShiLtJ_G0027076.1 mouse_genomes_project 3 71909067 71948693 + MGP_NODShiLtJ_P0060729 Gmps protein_coding unknown_likely_coding MGP_NODShiLtJ_T0062784.1 MGP_NODShiLtJ_G0027567.1 mouse_genomes_project 3 123074491 123075878 - MGP_NODShiLtJ_P0062784 Ubl4b protein_coding protein_coding MGP_NODShiLtJ_T0001113.1 MGP_NODShiLtJ_G0001036.1 mouse_genomes_project 3 35541733 35544560 - TEC TEC MGP_NODShiLtJ_T0004210.1 MGP_NODShiLtJ_G0003697.1 mouse_genomes_project 3 95105974 95177185 + Rbm46os antisense antisense MGP_NODShiLtJ_T0004211.1 MGP_NODShiLtJ_G0003697.1 mouse_genomes_project 3 95105974 95175266 + Rbm46os antisense antisense MGP_NODShiLtJ_T0004212.1 MGP_NODShiLtJ_G0003697.1 mouse_genomes_project 3 95106015 95175301 + Rbm46os antisense antisense MGP_NODShiLtJ_T0004213.1 MGP_NODShiLtJ_G0003697.1 mouse_genomes_project 3 95134413 95177830 + Rbm46os antisense antisense MGP_NODShiLtJ_T0014036.1 MGP_NODShiLtJ_G0012144.1 mouse_genomes_project 3 100687875 100688296 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010396.1 MGP_NODShiLtJ_G0008529.1 mouse_genomes_project 3 21011228 21011298 - Mir7007 miRNA miRNA MGP_NODShiLtJ_T0001142.1 MGP_NODShiLtJ_G0001065.1 mouse_genomes_project 3 45994041 45994586 + TEC TEC MGP_NODShiLtJ_T0014217.1 MGP_NODShiLtJ_G0012325.1 mouse_genomes_project 3 159612585 159613317 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014065.1 MGP_NODShiLtJ_G0012173.1 mouse_genomes_project 3 109365200 109365394 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061489.1 MGP_NODShiLtJ_G0027239.1 mouse_genomes_project 3 102217563 102221892 + MGP_NODShiLtJ_P0061489 Muc1 protein_coding protein_coding MGP_NODShiLtJ_T0061490.1 MGP_NODShiLtJ_G0027239.1 mouse_genomes_project 3 102219745 102220589 + Muc1 protein_coding processed_transcript MGP_NODShiLtJ_T0061491.1 MGP_NODShiLtJ_G0027239.1 mouse_genomes_project 3 102219977 102221708 + Muc1 protein_coding processed_transcript MGP_NODShiLtJ_T0062489.1 MGP_NODShiLtJ_G0027501.1 mouse_genomes_project 3 117670377 117674775 - Tshb protein_coding retained_intron MGP_NODShiLtJ_T0062490.1 MGP_NODShiLtJ_G0027501.1 mouse_genomes_project 3 117672304 117677269 - MGP_NODShiLtJ_P0062490 Tshb protein_coding protein_coding MGP_NODShiLtJ_T0062491.1 MGP_NODShiLtJ_G0027501.1 mouse_genomes_project 3 117672304 117677229 - MGP_NODShiLtJ_P0062491 Tshb protein_coding protein_coding MGP_NODShiLtJ_T0062492.1 MGP_NODShiLtJ_G0027501.1 mouse_genomes_project 3 117672313 117677273 - MGP_NODShiLtJ_P0062492 Tshb protein_coding protein_coding MGP_NODShiLtJ_T0062493.1 MGP_NODShiLtJ_G0027501.1 mouse_genomes_project 3 117672325 117677229 - MGP_NODShiLtJ_P0062493 Tshb protein_coding protein_coding MGP_NODShiLtJ_T0062494.1 MGP_NODShiLtJ_G0027501.1 mouse_genomes_project 3 117672352 117677038 - MGP_NODShiLtJ_P0062494 Tshb protein_coding protein_coding MGP_NODShiLtJ_T0063281.1 MGP_NODShiLtJ_G0027670.1 mouse_genomes_project 3 144700602 145116815 + MGP_NODShiLtJ_P0063281 Ndst4 protein_coding protein_coding MGP_NODShiLtJ_T0063282.1 MGP_NODShiLtJ_G0027670.1 mouse_genomes_project 3 144700616 145070704 + Ndst4 protein_coding retained_intron MGP_NODShiLtJ_T0063283.1 MGP_NODShiLtJ_G0027670.1 mouse_genomes_project 3 144740384 144986331 + MGP_NODShiLtJ_P0063283 Ndst4 protein_coding protein_coding MGP_NODShiLtJ_T0063284.1 MGP_NODShiLtJ_G0027670.1 mouse_genomes_project 3 145064192 145114991 + MGP_NODShiLtJ_P0063284 Ndst4 protein_coding protein_coding MGP_NODShiLtJ_T0063285.1 MGP_NODShiLtJ_G0027670.1 mouse_genomes_project 3 145064202 145075767 + Ndst4 protein_coding processed_transcript MGP_NODShiLtJ_T0063286.1 MGP_NODShiLtJ_G0027670.1 mouse_genomes_project 3 145094981 145109723 + MGP_NODShiLtJ_P0063286 Ndst4 protein_coding protein_coding MGP_NODShiLtJ_T0060412.1 MGP_NODShiLtJ_G0027007.1 mouse_genomes_project 3 57672437 57681828 - MGP_NODShiLtJ_P0060412 Mgarp protein_coding protein_coding MGP_NODShiLtJ_T0060413.1 MGP_NODShiLtJ_G0027007.1 mouse_genomes_project 3 57672437 57682018 - MGP_NODShiLtJ_P0060413 Mgarp protein_coding protein_coding MGP_NODShiLtJ_T0060414.1 MGP_NODShiLtJ_G0027007.1 mouse_genomes_project 3 57672437 57681806 - MGP_NODShiLtJ_P0060414 Mgarp protein_coding protein_coding MGP_NODShiLtJ_T0060415.1 MGP_NODShiLtJ_G0027007.1 mouse_genomes_project 3 57674847 57681783 - Mgarp protein_coding retained_intron MGP_NODShiLtJ_T0060416.1 MGP_NODShiLtJ_G0027007.1 mouse_genomes_project 3 57675288 57681768 - Mgarp protein_coding processed_transcript MGP_NODShiLtJ_T0062244.1 MGP_NODShiLtJ_G0027428.1 mouse_genomes_project 3 110369100 110369620 - MGP_NODShiLtJ_P0062244 Hist2h2ac protein_coding protein_coding MGP_NODShiLtJ_T0001221.1 MGP_NODShiLtJ_G0001142.1 mouse_genomes_project 3 91314652 91315941 - TEC TEC MGP_NODShiLtJ_T0062069.1 MGP_NODShiLtJ_G0027397.1 mouse_genomes_project 3 109253040 109283892 - MGP_NODShiLtJ_P0062069 Prune protein_coding protein_coding MGP_NODShiLtJ_T0062070.1 MGP_NODShiLtJ_G0027397.1 mouse_genomes_project 3 109264520 109268308 - Prune protein_coding retained_intron MGP_NODShiLtJ_T0013925.1 MGP_NODShiLtJ_G0012033.1 mouse_genomes_project 3 58774860 58775101 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0062382.1 MGP_NODShiLtJ_G0027466.1 mouse_genomes_project 3 112623189 112639071 + MGP_NODShiLtJ_P0062382 Reg4 protein_coding protein_coding MGP_NODShiLtJ_T0001268.1 MGP_NODShiLtJ_G0001189.1 mouse_genomes_project 3 137157727 137159961 + TEC TEC MGP_NODShiLtJ_T0013772.1 MGP_NODShiLtJ_G0011880.1 mouse_genomes_project 3 1708879 1709096 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101338.1 MGP_NODShiLtJ_G0039578.1 mouse_genomes_project 3 159324028 159332701 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101339.1 MGP_NODShiLtJ_G0039578.1 mouse_genomes_project 3 159326115 159339872 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101340.1 MGP_NODShiLtJ_G0039578.1 mouse_genomes_project 3 159334406 159340960 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0017810.1 MGP_NODShiLtJ_G0015373.1 mouse_genomes_project 3 58527088 58528473 + Gm38132 processed_transcript lincRNA MGP_NODShiLtJ_T0017811.1 MGP_NODShiLtJ_G0015373.1 mouse_genomes_project 3 58527117 58528130 + Gm38132 processed_transcript retained_intron MGP_NODShiLtJ_T0060865.1 MGP_NODShiLtJ_G0027113.1 mouse_genomes_project 3 78502247 78541432 - MGP_NODShiLtJ_P0060865 Sptssb protein_coding protein_coding MGP_NODShiLtJ_T0060866.1 MGP_NODShiLtJ_G0027113.1 mouse_genomes_project 3 78503283 78541414 - MGP_NODShiLtJ_P0060866 Sptssb protein_coding protein_coding MGP_NODShiLtJ_T0062083.1 MGP_NODShiLtJ_G0027399.1 mouse_genomes_project 3 109297911 109308702 - MGP_NODShiLtJ_P0062083 Anxa9 protein_coding protein_coding MGP_NODShiLtJ_T0062084.1 MGP_NODShiLtJ_G0027399.1 mouse_genomes_project 3 109297911 109309074 - MGP_NODShiLtJ_P0062084 Anxa9 protein_coding protein_coding MGP_NODShiLtJ_T0062085.1 MGP_NODShiLtJ_G0027399.1 mouse_genomes_project 3 109298113 109308702 - MGP_NODShiLtJ_P0062085 Anxa9 protein_coding protein_coding MGP_NODShiLtJ_T0062086.1 MGP_NODShiLtJ_G0027399.1 mouse_genomes_project 3 109307830 109308702 - MGP_NODShiLtJ_P0062086 Anxa9 protein_coding protein_coding MGP_NODShiLtJ_T0001090.1 MGP_NODShiLtJ_G0001013.1 mouse_genomes_project 3 18846779 18851555 + TEC TEC MGP_NODShiLtJ_T0097802.1 MGP_NODShiLtJ_G0036214.1 mouse_genomes_project 3 97346974 97347499 - pseudogene pseudogene MGP_NODShiLtJ_T0001116.1 MGP_NODShiLtJ_G0001039.1 mouse_genomes_project 3 36548224 36549172 + TEC TEC MGP_NODShiLtJ_T0007479.1 MGP_NODShiLtJ_G0006120.1 mouse_genomes_project 3 58540101 58542343 + Gm37170 lincRNA lincRNA MGP_NODShiLtJ_T0004341.1 MGP_NODShiLtJ_G0003782.1 mouse_genomes_project 3 166828918 166864177 + antisense antisense MGP_NODShiLtJ_T0007481.1 MGP_NODShiLtJ_G0006122.1 mouse_genomes_project 3 59134157 59185552 + Gm2447 lincRNA lincRNA MGP_NODShiLtJ_T0007482.1 MGP_NODShiLtJ_G0006122.1 mouse_genomes_project 3 59167481 59185550 + Gm2447 lincRNA lincRNA MGP_NODShiLtJ_T0010434.1 MGP_NODShiLtJ_G0008567.1 mouse_genomes_project 3 108977511 108977583 + Mir7013 miRNA miRNA MGP_NODShiLtJ_T0013842.1 MGP_NODShiLtJ_G0011950.1 mouse_genomes_project 3 23535097 23535867 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013969.1 MGP_NODShiLtJ_G0012077.1 mouse_genomes_project 3 74313515 74314364 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013943.1 MGP_NODShiLtJ_G0012051.1 mouse_genomes_project 3 65740313 65754508 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001349.1 MGP_NODShiLtJ_G0001269.1 mouse_genomes_project 3 175709132 175711484 - TEC TEC MGP_NODShiLtJ_T0061329.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101460897 101468773 + Arhgef2 protein_coding processed_transcript MGP_NODShiLtJ_T0061330.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101461102 101471535 + Arhgef2 protein_coding processed_transcript MGP_NODShiLtJ_T0061331.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101461234 101501100 + MGP_NODShiLtJ_P0061331 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061332.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101468616 101471697 + Arhgef2 protein_coding processed_transcript MGP_NODShiLtJ_T0061333.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101468804 101487753 + MGP_NODShiLtJ_P0061333 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061334.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101469562 101488657 + MGP_NODShiLtJ_P0061334 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061335.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101470338 101501703 + MGP_NODShiLtJ_P0061335 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061336.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101470338 101502221 + MGP_NODShiLtJ_P0061336 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061337.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101470712 101501066 + MGP_NODShiLtJ_P0061337 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061338.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101475303 101501034 + MGP_NODShiLtJ_P0061338 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061339.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101475316 101493715 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061340.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101475437 101501034 + MGP_NODShiLtJ_P0061340 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061341.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101475470 101502219 + MGP_NODShiLtJ_P0061341 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061342.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101475638 101488620 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061343.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101475726 101487218 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061344.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101476637 101487084 + MGP_NODShiLtJ_P0061344 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061345.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101477097 101494887 + MGP_NODShiLtJ_P0061345 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061346.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101477526 101487775 + MGP_NODShiLtJ_P0061346 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061347.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101483599 101487134 + MGP_NODShiLtJ_P0061347 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061348.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101483626 101486259 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061349.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101483630 101487150 + MGP_NODShiLtJ_P0061349 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061350.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101483728 101486492 + MGP_NODShiLtJ_P0061350 Arhgef2 protein_coding protein_coding MGP_NODShiLtJ_T0061351.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101486068 101488820 + Arhgef2 protein_coding processed_transcript MGP_NODShiLtJ_T0061352.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101486353 101487748 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061353.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101486890 101487796 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061354.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101487075 101491974 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061355.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101488480 101489234 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061356.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101496604 101498091 + Arhgef2 protein_coding retained_intron MGP_NODShiLtJ_T0061357.1 MGP_NODShiLtJ_G0027219.1 mouse_genomes_project 3 101498110 101501136 + Arhgef2 protein_coding processed_transcript MGP_NODShiLtJ_T0001363.1 MGP_NODShiLtJ_G0001283.1 mouse_genomes_project 3 180929904 180933079 + TEC TEC MGP_NODShiLtJ_T0011439.1 MGP_NODShiLtJ_G0009572.1 mouse_genomes_project 3 122930482 122930815 - Gm24383 misc_RNA misc_RNA MGP_NODShiLtJ_T0063919.1 MGP_NODShiLtJ_G0027794.1 mouse_genomes_project 3 168988503 169031788 - MGP_NODShiLtJ_P0063919 Samd13 protein_coding protein_coding MGP_NODShiLtJ_T0063920.1 MGP_NODShiLtJ_G0027794.1 mouse_genomes_project 3 168990525 169028600 - MGP_NODShiLtJ_P0063920 Samd13 protein_coding protein_coding MGP_NODShiLtJ_T0063921.1 MGP_NODShiLtJ_G0027794.1 mouse_genomes_project 3 168990536 169028712 - MGP_NODShiLtJ_P0063921 Samd13 protein_coding protein_coding MGP_NODShiLtJ_T0063922.1 MGP_NODShiLtJ_G0027794.1 mouse_genomes_project 3 168990621 169031671 - MGP_NODShiLtJ_P0063922 Samd13 protein_coding protein_coding MGP_NODShiLtJ_T0063925.1 MGP_NODShiLtJ_G0027794.1 mouse_genomes_project 3 169026647 169031667 - Samd13 protein_coding retained_intron MGP_NODShiLtJ_T0014015.1 MGP_NODShiLtJ_G0012123.1 mouse_genomes_project 3 91282115 91282762 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098359.1 MGP_NODShiLtJ_G0036764.1 mouse_genomes_project 3 119783080 119785939 + Gm43581 sense_intronic sense_intronic MGP_NODShiLtJ_T0060730.1 MGP_NODShiLtJ_G0027077.1 mouse_genomes_project 3 72050373 72084181 + MGP_NODShiLtJ_P0060730 Vmn2r1 protein_coding protein_coding MGP_NODShiLtJ_T0001285.1 MGP_NODShiLtJ_G0001206.1 mouse_genomes_project 3 144444302 144450098 - TEC TEC MGP_NODShiLtJ_T0060199.1 MGP_NODShiLtJ_G0026975.1 mouse_genomes_project 3 39407636 39414880 - MGP_NODShiLtJ_P0060199 Ccna2 protein_coding protein_coding MGP_NODShiLtJ_T0060200.1 MGP_NODShiLtJ_G0026975.1 mouse_genomes_project 3 39408424 39409641 - Ccna2 protein_coding processed_transcript MGP_NODShiLtJ_T0060201.1 MGP_NODShiLtJ_G0026975.1 mouse_genomes_project 3 39408768 39414281 - MGP_NODShiLtJ_P0060201 Ccna2 protein_coding protein_coding MGP_NODShiLtJ_T0060202.1 MGP_NODShiLtJ_G0026975.1 mouse_genomes_project 3 39408768 39414657 - MGP_NODShiLtJ_P0060202 Ccna2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0060203.1 MGP_NODShiLtJ_G0026975.1 mouse_genomes_project 3 39413176 39414694 - Ccna2 protein_coding retained_intron MGP_NODShiLtJ_T0060995.1 MGP_NODShiLtJ_G0027144.1 mouse_genomes_project 3 95059383 95105753 - MGP_NODShiLtJ_P0060995 Rbm46 protein_coding protein_coding MGP_NODShiLtJ_T0060996.1 MGP_NODShiLtJ_G0027144.1 mouse_genomes_project 3 95061268 95094990 - MGP_NODShiLtJ_P0060996 Rbm46 protein_coding protein_coding MGP_NODShiLtJ_T0060997.1 MGP_NODShiLtJ_G0027144.1 mouse_genomes_project 3 95061269 95094990 - MGP_NODShiLtJ_P0060997 Rbm46 protein_coding protein_coding MGP_NODShiLtJ_T0101876.1 MGP_NODShiLtJ_G0040044.1 mouse_genomes_project 3 104220529 104227955 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0062521.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118025381 118035036 + MGP_NODShiLtJ_P0062521 Nras protein_coding protein_coding MGP_NODShiLtJ_T0062522.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118025444 118029623 + MGP_NODShiLtJ_P0062522 Nras protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062523.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118025463 118031476 + MGP_NODShiLtJ_P0062523 Nras protein_coding protein_coding MGP_NODShiLtJ_T0062524.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118025687 118027407 + MGP_NODShiLtJ_P0062524 Nras protein_coding protein_coding MGP_NODShiLtJ_T0062525.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118025689 118030506 + MGP_NODShiLtJ_P0062525 Nras protein_coding protein_coding MGP_NODShiLtJ_T0062526.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118025836 118029622 + MGP_NODShiLtJ_P0062526 Nras protein_coding protein_coding MGP_NODShiLtJ_T0062527.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118025996 118033537 + MGP_NODShiLtJ_P0062527 Nras protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062528.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118025996 118035028 + MGP_NODShiLtJ_P0062528 Nras protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0062529.1 MGP_NODShiLtJ_G0027505.1 mouse_genomes_project 3 118026081 118030056 + Nras protein_coding retained_intron MGP_NODShiLtJ_T0010397.1 MGP_NODShiLtJ_G0008530.1 mouse_genomes_project 3 28535612 28535739 - Gm25773 miRNA miRNA MGP_NODShiLtJ_T0061555.1 MGP_NODShiLtJ_G0027254.1 mouse_genomes_project 3 102418686 102430367 + MGP_NODShiLtJ_P0061555 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0061556.1 MGP_NODShiLtJ_G0027254.1 mouse_genomes_project 3 102418818 102426700 + MGP_NODShiLtJ_P0061556 protein_coding protein_coding MGP_NODShiLtJ_T0061557.1 MGP_NODShiLtJ_G0027254.1 mouse_genomes_project 3 102418838 102424396 + MGP_NODShiLtJ_P0061557 protein_coding protein_coding MGP_NODShiLtJ_T0061558.1 MGP_NODShiLtJ_G0027254.1 mouse_genomes_project 3 102418861 102426856 + MGP_NODShiLtJ_P0061558 protein_coding protein_coding MGP_NODShiLtJ_T0061559.1 MGP_NODShiLtJ_G0027254.1 mouse_genomes_project 3 102420786 102424195 + protein_coding retained_intron MGP_NODShiLtJ_T0061560.1 MGP_NODShiLtJ_G0027254.1 mouse_genomes_project 3 102421795 102426856 + MGP_NODShiLtJ_P0061560 protein_coding protein_coding MGP_NODShiLtJ_T0061561.1 MGP_NODShiLtJ_G0027254.1 mouse_genomes_project 3 102424677 102427512 + protein_coding processed_transcript MGP_NODShiLtJ_T0062113.1 MGP_NODShiLtJ_G0027403.1 mouse_genomes_project 3 109550180 109562193 + MGP_NODShiLtJ_P0062113 Ctsk protein_coding protein_coding MGP_NODShiLtJ_T0001290.1 MGP_NODShiLtJ_G0001211.1 mouse_genomes_project 3 146233506 146237288 + TEC TEC MGP_NODShiLtJ_T0100502.1 MGP_NODShiLtJ_G0038896.1 mouse_genomes_project 3 177140597 177140713 + Gm22206 snoRNA snoRNA MGP_NODShiLtJ_T0007653.1 MGP_NODShiLtJ_G0006254.1 mouse_genomes_project 3 154990247 155198027 - lincRNA lincRNA MGP_NODShiLtJ_T0013874.1 MGP_NODShiLtJ_G0011982.1 mouse_genomes_project 3 40035704 40036558 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101899.1 MGP_NODShiLtJ_G0040067.1 mouse_genomes_project 3 164491127 164502336 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001152.1 MGP_NODShiLtJ_G0001075.1 mouse_genomes_project 3 56967825 56973426 - TEC TEC MGP_NODShiLtJ_T0017870.1 MGP_NODShiLtJ_G0015395.1 mouse_genomes_project 3 164753771 164771887 + Gm43646 processed_transcript processed_transcript MGP_NODShiLtJ_T0101881.1 MGP_NODShiLtJ_G0040049.1 mouse_genomes_project 3 108036972 108037624 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0060090.1 MGP_NODShiLtJ_G0026956.1 mouse_genomes_project 3 35208247 35221208 - MGP_NODShiLtJ_P0060090 Mrpl47 protein_coding protein_coding MGP_NODShiLtJ_T0060091.1 MGP_NODShiLtJ_G0026956.1 mouse_genomes_project 3 35210425 35216663 - Mrpl47 protein_coding processed_transcript MGP_NODShiLtJ_T0060092.1 MGP_NODShiLtJ_G0026956.1 mouse_genomes_project 3 35220161 35221664 - Mrpl47 protein_coding retained_intron MGP_NODShiLtJ_T0063272.1 MGP_NODShiLtJ_G0027667.1 mouse_genomes_project 3 143269199 143273088 + MGP_NODShiLtJ_P0063272 Tram1l1 protein_coding protein_coding MGP_NODShiLtJ_T0007522.1 MGP_NODShiLtJ_G0006153.1 mouse_genomes_project 3 92071327 92135416 - Gm37971 lincRNA lincRNA MGP_NODShiLtJ_T0062392.1 MGP_NODShiLtJ_G0027470.1 mouse_genomes_project 3 112833012 112858163 - MGP_NODShiLtJ_P0062392 protein_coding protein_coding MGP_NODShiLtJ_T0062394.1 MGP_NODShiLtJ_G0027470.1 mouse_genomes_project 3 112833023 112858643 - MGP_NODShiLtJ_P0062394 protein_coding protein_coding MGP_NODShiLtJ_T0013921.1 MGP_NODShiLtJ_G0012029.1 mouse_genomes_project 3 57690876 57691195 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004207.1 MGP_NODShiLtJ_G0003694.1 mouse_genomes_project 3 91590046 91618177 - Gm36569 antisense antisense MGP_NODShiLtJ_T0061077.1 MGP_NODShiLtJ_G0027165.1 mouse_genomes_project 3 98322899 98340566 - MGP_NODShiLtJ_P0061077 Glt28d2 protein_coding protein_coding MGP_NODShiLtJ_T0063934.1 MGP_NODShiLtJ_G0027796.1 mouse_genomes_project 3 169201563 169298163 + Ttll7 protein_coding retained_intron MGP_NODShiLtJ_T0063935.1 MGP_NODShiLtJ_G0027796.1 mouse_genomes_project 3 169201563 169344498 + MGP_NODShiLtJ_P0063935 Ttll7 protein_coding protein_coding MGP_NODShiLtJ_T0063936.1 MGP_NODShiLtJ_G0027796.1 mouse_genomes_project 3 169201563 169345757 + MGP_NODShiLtJ_P0063936 Ttll7 protein_coding protein_coding MGP_NODShiLtJ_T0063937.1 MGP_NODShiLtJ_G0027796.1 mouse_genomes_project 3 169244445 169341499 + MGP_NODShiLtJ_P0063937 Ttll7 protein_coding protein_coding MGP_NODShiLtJ_T0063938.1 MGP_NODShiLtJ_G0027796.1 mouse_genomes_project 3 169246925 169248776 + MGP_NODShiLtJ_P0063938 Ttll7 protein_coding protein_coding MGP_NODShiLtJ_T0063939.1 MGP_NODShiLtJ_G0027796.1 mouse_genomes_project 3 169303005 169343668 + Ttll7 protein_coding retained_intron MGP_NODShiLtJ_T0001182.1 MGP_NODShiLtJ_G0001103.1 mouse_genomes_project 3 59525144 59529320 + TEC TEC MGP_NODShiLtJ_T0061114.1 MGP_NODShiLtJ_G0027176.1 mouse_genomes_project 3 100037030 100052718 + MGP_NODShiLtJ_P0061114 Cd5l protein_coding protein_coding MGP_NODShiLtJ_T0063257.1 MGP_NODShiLtJ_G0027664.1 mouse_genomes_project 3 142208356 142226034 - MGP_NODShiLtJ_P0063257 Mettl14 protein_coding protein_coding MGP_NODShiLtJ_T0063258.1 MGP_NODShiLtJ_G0027664.1 mouse_genomes_project 3 142208356 142226211 - MGP_NODShiLtJ_P0063258 Mettl14 protein_coding protein_coding MGP_NODShiLtJ_T0063259.1 MGP_NODShiLtJ_G0027664.1 mouse_genomes_project 3 142208356 142226088 - MGP_NODShiLtJ_P0063259 Mettl14 protein_coding protein_coding MGP_NODShiLtJ_T0063260.1 MGP_NODShiLtJ_G0027664.1 mouse_genomes_project 3 142209531 142214688 - MGP_NODShiLtJ_P0063260 Mettl14 protein_coding protein_coding MGP_NODShiLtJ_T0063261.1 MGP_NODShiLtJ_G0027664.1 mouse_genomes_project 3 142225819 142226201 - Mettl14 protein_coding retained_intron MGP_NODShiLtJ_T0013824.1 MGP_NODShiLtJ_G0011932.1 mouse_genomes_project 3 18404943 18405859 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004269.1 MGP_NODShiLtJ_G0003735.1 mouse_genomes_project 3 119020990 119025029 - Phtf1os antisense antisense MGP_NODShiLtJ_T0014222.1 MGP_NODShiLtJ_G0012330.1 mouse_genomes_project 3 161451204 161452585 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004297.1 MGP_NODShiLtJ_G0003750.1 mouse_genomes_project 3 134463870 134466021 - Gm42893 antisense antisense MGP_NODShiLtJ_T0010443.1 MGP_NODShiLtJ_G0008576.1 mouse_genomes_project 3 133722801 133722855 + Mir669n miRNA miRNA MGP_NODShiLtJ_T0007686.1 MGP_NODShiLtJ_G0006283.1 mouse_genomes_project 3 165845815 165846770 + Gm42708 lincRNA lincRNA MGP_NODShiLtJ_T0001267.1 MGP_NODShiLtJ_G0001188.1 mouse_genomes_project 3 136740140 136744817 + TEC TEC MGP_NODShiLtJ_T0013855.1 MGP_NODShiLtJ_G0011963.1 mouse_genomes_project 3 33176640 33176908 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0060739.1 MGP_NODShiLtJ_G0027084.1 mouse_genomes_project 3 73309881 73585550 + Kcnab1 protein_coding processed_transcript MGP_NODShiLtJ_T0060740.1 MGP_NODShiLtJ_G0027084.1 mouse_genomes_project 3 73309881 73600617 + MGP_NODShiLtJ_P0060740 Kcnab1 protein_coding protein_coding MGP_NODShiLtJ_T0060741.1 MGP_NODShiLtJ_G0027084.1 mouse_genomes_project 3 73396330 73600621 + Kcnab1 protein_coding processed_transcript MGP_NODShiLtJ_T0060742.1 MGP_NODShiLtJ_G0027084.1 mouse_genomes_project 3 73465322 73599482 + Kcnab1 protein_coding processed_transcript MGP_NODShiLtJ_T0060743.1 MGP_NODShiLtJ_G0027084.1 mouse_genomes_project 3 73511416 73576851 + Kcnab1 protein_coding processed_transcript MGP_NODShiLtJ_T0060744.1 MGP_NODShiLtJ_G0027084.1 mouse_genomes_project 3 73573532 73578586 + Kcnab1 protein_coding retained_intron MGP_NODShiLtJ_T0060904.1 MGP_NODShiLtJ_G0027124.1 mouse_genomes_project 3 86911880 87777282 + MGP_NODShiLtJ_P0060904 protein_coding protein_coding MGP_NODShiLtJ_T0060905.1 MGP_NODShiLtJ_G0027124.1 mouse_genomes_project 3 86912169 87544873 + protein_coding processed_transcript MGP_NODShiLtJ_T0060906.1 MGP_NODShiLtJ_G0027124.1 mouse_genomes_project 3 86913193 87775901 + MGP_NODShiLtJ_P0060906 protein_coding protein_coding MGP_NODShiLtJ_T0060907.1 MGP_NODShiLtJ_G0027124.1 mouse_genomes_project 3 87610175 87774816 + MGP_NODShiLtJ_P0060907 protein_coding protein_coding MGP_NODShiLtJ_T0059764.1 MGP_NODShiLtJ_G0026884.1 mouse_genomes_project 3 9034232 9064657 + MGP_NODShiLtJ_P0059764 Chmp4c protein_coding protein_coding MGP_NODShiLtJ_T0059765.1 MGP_NODShiLtJ_G0026884.1 mouse_genomes_project 3 9034283 9101302 + MGP_NODShiLtJ_P0059765 Chmp4c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010460.1 MGP_NODShiLtJ_G0008593.1 mouse_genomes_project 3 159553357 159553422 + Mir1956 miRNA miRNA MGP_NODShiLtJ_T0062056.1 MGP_NODShiLtJ_G0027394.1 mouse_genomes_project 3 109227234 109234932 + MGP_NODShiLtJ_P0062056 Cdc42se1 protein_coding protein_coding MGP_NODShiLtJ_T0062057.1 MGP_NODShiLtJ_G0027394.1 mouse_genomes_project 3 109227312 109230904 + Cdc42se1 protein_coding retained_intron MGP_NODShiLtJ_T0062058.1 MGP_NODShiLtJ_G0027394.1 mouse_genomes_project 3 109227454 109233105 + MGP_NODShiLtJ_P0062058 Cdc42se1 protein_coding protein_coding MGP_NODShiLtJ_T0062060.1 MGP_NODShiLtJ_G0027394.1 mouse_genomes_project 3 109230809 109233063 + MGP_NODShiLtJ_P0062060 Cdc42se1 protein_coding protein_coding MGP_NODShiLtJ_T0062061.1 MGP_NODShiLtJ_G0027394.1 mouse_genomes_project 3 109230815 109233185 + MGP_NODShiLtJ_P0062061 Cdc42se1 protein_coding protein_coding MGP_NODShiLtJ_T0099185.1 MGP_NODShiLtJ_G0037579.1 mouse_genomes_project 3 96001636 96001743 + Gm24584 snRNA snRNA MGP_NODShiLtJ_T0007510.1 MGP_NODShiLtJ_G0006144.1 mouse_genomes_project 3 83292954 83482341 + lincRNA lincRNA MGP_NODShiLtJ_T0062895.1 MGP_NODShiLtJ_G0027594.1 mouse_genomes_project 3 124013384 124033670 - MGP_NODShiLtJ_P0062895 Sars protein_coding protein_coding MGP_NODShiLtJ_T0062896.1 MGP_NODShiLtJ_G0027594.1 mouse_genomes_project 3 124015131 124033641 - MGP_NODShiLtJ_P0062896 Sars protein_coding protein_coding MGP_NODShiLtJ_T0062897.1 MGP_NODShiLtJ_G0027594.1 mouse_genomes_project 3 124016750 124033615 - MGP_NODShiLtJ_P0062897 Sars protein_coding protein_coding MGP_NODShiLtJ_T0062898.1 MGP_NODShiLtJ_G0027594.1 mouse_genomes_project 3 124017869 124033681 - MGP_NODShiLtJ_P0062898 Sars protein_coding protein_coding MGP_NODShiLtJ_T0062899.1 MGP_NODShiLtJ_G0027594.1 mouse_genomes_project 3 124022900 124033628 - Sars protein_coding retained_intron MGP_NODShiLtJ_T0100507.1 MGP_NODShiLtJ_G0038901.1 mouse_genomes_project 3 177369583 177369663 - Snord45c snoRNA snoRNA MGP_NODShiLtJ_T0100471.1 MGP_NODShiLtJ_G0038865.1 mouse_genomes_project 3 102000441 102000571 - Gm24403 snoRNA snoRNA MGP_NODShiLtJ_T0062400.1 MGP_NODShiLtJ_G0027476.1 mouse_genomes_project 3 113236044 113257629 - MGP_NODShiLtJ_P0062400 protein_coding protein_coding MGP_NODShiLtJ_T0062402.1 MGP_NODShiLtJ_G0027476.1 mouse_genomes_project 3 113252893 113263517 - protein_coding processed_transcript MGP_NODShiLtJ_T0013863.1 MGP_NODShiLtJ_G0011971.1 mouse_genomes_project 3 38286778 38287697 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0061410.1 MGP_NODShiLtJ_G0027230.1 mouse_genomes_project 3 102055980 102064351 - MGP_NODShiLtJ_P0061410 Fdps protein_coding protein_coding MGP_NODShiLtJ_T0061411.1 MGP_NODShiLtJ_G0027230.1 mouse_genomes_project 3 102055980 102064280 - MGP_NODShiLtJ_P0061411 Fdps protein_coding protein_coding MGP_NODShiLtJ_T0061412.1 MGP_NODShiLtJ_G0027230.1 mouse_genomes_project 3 102056141 102058072 - MGP_NODShiLtJ_P0061412 Fdps protein_coding protein_coding MGP_NODShiLtJ_T0061413.1 MGP_NODShiLtJ_G0027230.1 mouse_genomes_project 3 102057448 102058376 - Fdps protein_coding retained_intron MGP_NODShiLtJ_T0061414.1 MGP_NODShiLtJ_G0027230.1 mouse_genomes_project 3 102057756 102063707 - MGP_NODShiLtJ_P0061414 Fdps protein_coding protein_coding MGP_NODShiLtJ_T0061415.1 MGP_NODShiLtJ_G0027230.1 mouse_genomes_project 3 102057991 102064244 - MGP_NODShiLtJ_P0061415 Fdps protein_coding protein_coding MGP_NODShiLtJ_T0061416.1 MGP_NODShiLtJ_G0027230.1 mouse_genomes_project 3 102061330 102064283 - Fdps protein_coding retained_intron MGP_NODShiLtJ_T0014079.1 MGP_NODShiLtJ_G0012187.1 mouse_genomes_project 3 112651819 112652308 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004499.1 MGP_NODShiLtJ_G0003906.1 mouse_genomes_project 4 153186773 153189290 - antisense antisense MGP_NODShiLtJ_T0065513.1 MGP_NODShiLtJ_G0028136.1 mouse_genomes_project 4 65030638 65053112 - MGP_NODShiLtJ_P0065513 Ptgr1 protein_coding protein_coding MGP_NODShiLtJ_T0069403.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173241412 173249607 + protein_coding retained_intron MGP_NODShiLtJ_T0069404.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173241480 173278674 + protein_coding processed_transcript MGP_NODShiLtJ_T0069405.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173241480 173256559 + MGP_NODShiLtJ_P0069405 protein_coding protein_coding MGP_NODShiLtJ_T0069406.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173241480 173304722 + MGP_NODShiLtJ_P0069406 protein_coding protein_coding MGP_NODShiLtJ_T0069407.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173241532 173304731 + MGP_NODShiLtJ_P0069407 protein_coding protein_coding MGP_NODShiLtJ_T0069408.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173256559 173285489 + protein_coding retained_intron MGP_NODShiLtJ_T0069409.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173264391 173285322 + protein_coding processed_transcript MGP_NODShiLtJ_T0069410.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173289541 173304302 + protein_coding retained_intron MGP_NODShiLtJ_T0069411.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173299786 173304427 + protein_coding retained_intron MGP_NODShiLtJ_T0069412.1 MGP_NODShiLtJ_G0029017.1 mouse_genomes_project 4 173299833 173304377 + protein_coding retained_intron MGP_NODShiLtJ_T0100516.1 MGP_NODShiLtJ_G0038910.1 mouse_genomes_project 4 4973540 4973672 + Gm23860 snoRNA snoRNA MGP_NODShiLtJ_T0067005.1 MGP_NODShiLtJ_G0028468.1 mouse_genomes_project 4 131803417 132035828 - MGP_NODShiLtJ_P0067005 St3gal3 protein_coding protein_coding MGP_NODShiLtJ_T0067006.1 MGP_NODShiLtJ_G0028468.1 mouse_genomes_project 4 131803421 132035852 - MGP_NODShiLtJ_P0067006 St3gal3 protein_coding protein_coding MGP_NODShiLtJ_T0067007.1 MGP_NODShiLtJ_G0028468.1 mouse_genomes_project 4 131803423 132035820 - MGP_NODShiLtJ_P0067007 St3gal3 protein_coding protein_coding MGP_NODShiLtJ_T0067008.1 MGP_NODShiLtJ_G0028468.1 mouse_genomes_project 4 131811426 131921438 - MGP_NODShiLtJ_P0067008 St3gal3 protein_coding protein_coding MGP_NODShiLtJ_T0067009.1 MGP_NODShiLtJ_G0028468.1 mouse_genomes_project 4 131811518 131840300 - MGP_NODShiLtJ_P0067009 St3gal3 protein_coding protein_coding MGP_NODShiLtJ_T0007767.1 MGP_NODShiLtJ_G0006345.1 mouse_genomes_project 4 48006121 48010635 + lincRNA lincRNA MGP_NODShiLtJ_T0014477.1 MGP_NODShiLtJ_G0012585.1 mouse_genomes_project 4 81744756 81745619 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066839.1 MGP_NODShiLtJ_G0028438.1 mouse_genomes_project 4 130469987 130477676 - MGP_NODShiLtJ_P0066839 Mmachc protein_coding protein_coding MGP_NODShiLtJ_T0066840.1 MGP_NODShiLtJ_G0028438.1 mouse_genomes_project 4 130473422 130477558 - Mmachc protein_coding processed_transcript MGP_NODShiLtJ_T0100587.1 MGP_NODShiLtJ_G0038981.1 mouse_genomes_project 4 147467866 147468003 + Snora16a snoRNA snoRNA MGP_NODShiLtJ_T0068840.1 MGP_NODShiLtJ_G0028918.1 mouse_genomes_project 4 165095664 165146932 - MGP_NODShiLtJ_P0068840 Clcn6 protein_coding protein_coding MGP_NODShiLtJ_T0068841.1 MGP_NODShiLtJ_G0028918.1 mouse_genomes_project 4 165097555 165146924 - MGP_NODShiLtJ_P0068841 Clcn6 protein_coding protein_coding MGP_NODShiLtJ_T0068842.1 MGP_NODShiLtJ_G0028918.1 mouse_genomes_project 4 165098010 165146881 - MGP_NODShiLtJ_P0068842 Clcn6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068843.1 MGP_NODShiLtJ_G0028918.1 mouse_genomes_project 4 165115857 165146874 - Clcn6 protein_coding processed_transcript MGP_NODShiLtJ_T0068844.1 MGP_NODShiLtJ_G0028918.1 mouse_genomes_project 4 165117825 165146673 - MGP_NODShiLtJ_P0068844 Clcn6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066967.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131738180 131743943 - MGP_NODShiLtJ_P0066967 Ccdc24 protein_coding protein_coding MGP_NODShiLtJ_T0066968.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131739309 131740628 - Ccdc24 protein_coding processed_transcript MGP_NODShiLtJ_T0066969.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131740402 131743010 - Ccdc24 protein_coding retained_intron MGP_NODShiLtJ_T0066971.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131740914 131744264 - MGP_NODShiLtJ_P0066971 Ccdc24 protein_coding protein_coding MGP_NODShiLtJ_T0066972.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131741163 131742816 - MGP_NODShiLtJ_P0066972 Ccdc24 protein_coding protein_coding MGP_NODShiLtJ_T0066973.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131741278 131744230 - MGP_NODShiLtJ_P0066973 Ccdc24 protein_coding protein_coding MGP_NODShiLtJ_T0066974.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131741419 131743044 - Ccdc24 protein_coding processed_transcript MGP_NODShiLtJ_T0066975.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131741797 131744267 - MGP_NODShiLtJ_P0066975 Ccdc24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066976.1 MGP_NODShiLtJ_G0028462.1 mouse_genomes_project 4 131742194 131744230 - MGP_NODShiLtJ_P0066976 Ccdc24 protein_coding protein_coding MGP_NODShiLtJ_T0064688.1 MGP_NODShiLtJ_G0027950.1 mouse_genomes_project 4 37750069 37751941 + MGP_NODShiLtJ_P0064688 Ifnk protein_coding protein_coding MGP_NODShiLtJ_T0001385.1 MGP_NODShiLtJ_G0001305.1 mouse_genomes_project 4 112445434 112451496 + TEC TEC MGP_NODShiLtJ_T0068697.1 MGP_NODShiLtJ_G0028859.1 mouse_genomes_project 4 157959367 158006415 - MGP_NODShiLtJ_P0068697 Rsc1a1 protein_coding protein_coding MGP_NODShiLtJ_T0068698.1 MGP_NODShiLtJ_G0028859.1 mouse_genomes_project 4 157965379 158006415 - MGP_NODShiLtJ_P0068698 Rsc1a1 protein_coding protein_coding MGP_NODShiLtJ_T0066508.1 MGP_NODShiLtJ_G0028367.1 mouse_genomes_project 4 122320240 122390683 + MGP_NODShiLtJ_P0066508 3110021N24Rik protein_coding protein_coding MGP_NODShiLtJ_T0069116.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169467831 169520137 + MGP_NODShiLtJ_P0069116 Dnajc11 protein_coding protein_coding MGP_NODShiLtJ_T0069117.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169467871 169513540 + Dnajc11 protein_coding retained_intron MGP_NODShiLtJ_T0069118.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169467874 169493554 + Dnajc11 protein_coding retained_intron MGP_NODShiLtJ_T0069119.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169467879 169519218 + Dnajc11 protein_coding retained_intron MGP_NODShiLtJ_T0069120.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169467884 169519222 + MGP_NODShiLtJ_P0069120 Dnajc11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069121.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169482411 169505427 + MGP_NODShiLtJ_P0069121 Dnajc11 protein_coding protein_coding MGP_NODShiLtJ_T0069122.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169493201 169508357 + Dnajc11 protein_coding processed_transcript MGP_NODShiLtJ_T0069123.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169504648 169511140 + Dnajc11 protein_coding processed_transcript MGP_NODShiLtJ_T0069124.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169506560 169513901 + Dnajc11 protein_coding retained_intron MGP_NODShiLtJ_T0069125.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169506629 169508354 + Dnajc11 protein_coding retained_intron MGP_NODShiLtJ_T0069126.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169516983 169518736 + Dnajc11 protein_coding retained_intron MGP_NODShiLtJ_T0069127.1 MGP_NODShiLtJ_G0028968.1 mouse_genomes_project 4 169517742 169519227 + Dnajc11 protein_coding retained_intron MGP_NODShiLtJ_T0100544.1 MGP_NODShiLtJ_G0038938.1 mouse_genomes_project 4 62799723 62799856 - Gm25053 snoRNA snoRNA MGP_NODShiLtJ_T0067175.1 MGP_NODShiLtJ_G0028513.1 mouse_genomes_project 4 134371047 134391330 - MGP_NODShiLtJ_P0067175 Foxo6 protein_coding protein_coding MGP_NODShiLtJ_T0014464.1 MGP_NODShiLtJ_G0012572.1 mouse_genomes_project 4 76797148 76800689 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014592.1 MGP_NODShiLtJ_G0012700.1 mouse_genomes_project 4 125920848 125921839 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007728.1 MGP_NODShiLtJ_G0006312.1 mouse_genomes_project 4 309494 322721 - Gm26857 lincRNA lincRNA MGP_NODShiLtJ_T0014585.1 MGP_NODShiLtJ_G0012693.1 mouse_genomes_project 4 123306912 123308056 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066035.1 MGP_NODShiLtJ_G0028274.1 mouse_genomes_project 4 109248782 109288780 - MGP_NODShiLtJ_P0066035 Cyp2j5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100591.1 MGP_NODShiLtJ_G0038985.1 mouse_genomes_project 4 147469104 147469178 + Snord99 snoRNA snoRNA MGP_NODShiLtJ_T0014339.1 MGP_NODShiLtJ_G0012447.1 mouse_genomes_project 4 26246148 26246615 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067285.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835805 138219273 - MGP_NODShiLtJ_P0067285 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067286.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835805 137856056 - MGP_NODShiLtJ_P0067286 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067287.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835888 137858483 - MGP_NODShiLtJ_P0067287 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067288.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835888 138219273 - MGP_NODShiLtJ_P0067288 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067289.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835888 137970536 - MGP_NODShiLtJ_P0067289 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067290.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835888 137852468 - MGP_NODShiLtJ_P0067290 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067291.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835888 137996205 - MGP_NODShiLtJ_P0067291 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067292.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835888 138047966 - MGP_NODShiLtJ_P0067292 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067293.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835890 138219273 - MGP_NODShiLtJ_P0067293 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067294.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835890 138028215 - MGP_NODShiLtJ_P0067294 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067295.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137835892 138219273 - MGP_NODShiLtJ_P0067295 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067296.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137869162 137876572 - MGP_NODShiLtJ_P0067296 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067297.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137883306 137893546 - Macf1 protein_coding processed_transcript MGP_NODShiLtJ_T0067298.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137943036 138028352 - MGP_NODShiLtJ_P0067298 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067299.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 137943036 138196852 - MGP_NODShiLtJ_P0067299 Macf1 protein_coding protein_coding MGP_NODShiLtJ_T0067300.1 MGP_NODShiLtJ_G0028545.1 mouse_genomes_project 4 138039497 138068457 - Macf1 protein_coding processed_transcript MGP_NODShiLtJ_T0100513.1 MGP_NODShiLtJ_G0038907.1 mouse_genomes_project 4 1530309 1530441 + Gm26436 snoRNA snoRNA MGP_NODShiLtJ_T0067976.1 MGP_NODShiLtJ_G0028690.1 mouse_genomes_project 4 148407480 148484838 + MGP_NODShiLtJ_P0067976 Wasf2 protein_coding protein_coding MGP_NODShiLtJ_T0067977.1 MGP_NODShiLtJ_G0028690.1 mouse_genomes_project 4 148407515 148470182 + MGP_NODShiLtJ_P0067977 Wasf2 protein_coding protein_coding MGP_NODShiLtJ_T0067978.1 MGP_NODShiLtJ_G0028690.1 mouse_genomes_project 4 148407604 148461633 + Wasf2 protein_coding processed_transcript MGP_NODShiLtJ_T0067979.1 MGP_NODShiLtJ_G0028690.1 mouse_genomes_project 4 148461073 148461685 + Wasf2 protein_coding processed_transcript MGP_NODShiLtJ_T0067980.1 MGP_NODShiLtJ_G0028690.1 mouse_genomes_project 4 148461443 148481586 + MGP_NODShiLtJ_P0067980 Wasf2 protein_coding protein_coding MGP_NODShiLtJ_T0067981.1 MGP_NODShiLtJ_G0028690.1 mouse_genomes_project 4 148474174 148475710 + Wasf2 protein_coding processed_transcript MGP_NODShiLtJ_T0065838.1 MGP_NODShiLtJ_G0028216.1 mouse_genomes_project 4 95628060 95906486 + MGP_NODShiLtJ_P0065838 Cntln protein_coding protein_coding MGP_NODShiLtJ_T0065839.1 MGP_NODShiLtJ_G0028216.1 mouse_genomes_project 4 95628155 95712131 + MGP_NODShiLtJ_P0065839 Cntln protein_coding protein_coding MGP_NODShiLtJ_T0065840.1 MGP_NODShiLtJ_G0028216.1 mouse_genomes_project 4 95628216 95906482 + MGP_NODShiLtJ_P0065840 Cntln protein_coding protein_coding MGP_NODShiLtJ_T0065841.1 MGP_NODShiLtJ_G0028216.1 mouse_genomes_project 4 95867949 95906483 + MGP_NODShiLtJ_P0065841 Cntln protein_coding protein_coding MGP_NODShiLtJ_T0014479.1 MGP_NODShiLtJ_G0012587.1 mouse_genomes_project 4 82675919 82677475 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068718.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158191988 158332412 - MGP_NODShiLtJ_P0068718 Fhad1 protein_coding protein_coding MGP_NODShiLtJ_T0068719.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158192401 158328982 - MGP_NODShiLtJ_P0068719 Fhad1 protein_coding protein_coding MGP_NODShiLtJ_T0068720.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158192401 158332418 - MGP_NODShiLtJ_P0068720 Fhad1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068721.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158217396 158224096 - Fhad1 protein_coding processed_transcript MGP_NODShiLtJ_T0068722.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158217396 158234879 - MGP_NODShiLtJ_P0068722 Fhad1 protein_coding protein_coding MGP_NODShiLtJ_T0068723.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158230152 158258868 - Fhad1 protein_coding processed_transcript MGP_NODShiLtJ_T0068724.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158234572 158260986 - Fhad1 protein_coding processed_transcript MGP_NODShiLtJ_T0068725.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158269627 158332427 - Fhad1 protein_coding retained_intron MGP_NODShiLtJ_T0068726.1 MGP_NODShiLtJ_G0028867.1 mouse_genomes_project 4 158331122 158332384 - Fhad1 protein_coding processed_transcript MGP_NODShiLtJ_T0065744.1 MGP_NODShiLtJ_G0028203.1 mouse_genomes_project 4 90147200 90148344 + MGP_NODShiLtJ_P0065744 protein_coding protein_coding MGP_NODShiLtJ_T0099292.1 MGP_NODShiLtJ_G0037686.1 mouse_genomes_project 4 128328408 128328541 - Gm23230 snRNA snRNA MGP_NODShiLtJ_T0010474.1 MGP_NODShiLtJ_G0008607.1 mouse_genomes_project 4 14025761 14025853 - Mir6400 miRNA miRNA MGP_NODShiLtJ_T0066397.1 MGP_NODShiLtJ_G0028348.1 mouse_genomes_project 4 121160578 121168740 - MGP_NODShiLtJ_P0066397 Dmrtb1 protein_coding protein_coding MGP_NODShiLtJ_T0066398.1 MGP_NODShiLtJ_G0028348.1 mouse_genomes_project 4 121160580 121169390 - MGP_NODShiLtJ_P0066398 Dmrtb1 protein_coding protein_coding MGP_NODShiLtJ_T0066399.1 MGP_NODShiLtJ_G0028348.1 mouse_genomes_project 4 121161192 121166113 - Dmrtb1 protein_coding retained_intron MGP_NODShiLtJ_T0005562.1 MGP_NODShiLtJ_G0004682.1 mouse_genomes_project 4 121297335 121307741 - Lrp8os3 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0065476.1 MGP_NODShiLtJ_G0028128.1 mouse_genomes_project 4 63910988 63923995 - MGP_NODShiLtJ_P0065476 Txn1 protein_coding protein_coding MGP_NODShiLtJ_T0065085.1 MGP_NODShiLtJ_G0028035.1 mouse_genomes_project 4 48279242 48281183 + MGP_NODShiLtJ_P0065085 Ccin protein_coding protein_coding MGP_NODShiLtJ_T0067043.1 MGP_NODShiLtJ_G0028475.1 mouse_genomes_project 4 132352825 132368889 - MGP_NODShiLtJ_P0067043 Mpl protein_coding protein_coding MGP_NODShiLtJ_T0067044.1 MGP_NODShiLtJ_G0028475.1 mouse_genomes_project 4 132352827 132368871 - MGP_NODShiLtJ_P0067044 Mpl protein_coding protein_coding MGP_NODShiLtJ_T0067045.1 MGP_NODShiLtJ_G0028475.1 mouse_genomes_project 4 132353682 132368833 - MGP_NODShiLtJ_P0067045 Mpl protein_coding protein_coding MGP_NODShiLtJ_T0067046.1 MGP_NODShiLtJ_G0028475.1 mouse_genomes_project 4 132353839 132368826 - MGP_NODShiLtJ_P0067046 Mpl protein_coding protein_coding MGP_NODShiLtJ_T0101925.1 MGP_NODShiLtJ_G0040093.1 mouse_genomes_project 4 128706124 128707170 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004558.1 MGP_NODShiLtJ_G0003951.1 mouse_genomes_project 4 173587380 173589557 - 1500002C15Rik antisense antisense MGP_NODShiLtJ_T0004559.1 MGP_NODShiLtJ_G0003951.1 mouse_genomes_project 4 173587383 173589457 - 1500002C15Rik antisense antisense MGP_NODShiLtJ_T0067472.1 MGP_NODShiLtJ_G0028590.1 mouse_genomes_project 4 141552541 141574608 - MGP_NODShiLtJ_P0067472 Tfap2e protein_coding protein_coding MGP_NODShiLtJ_T0067233.1 MGP_NODShiLtJ_G0028529.1 mouse_genomes_project 4 135485984 135496499 - MGP_NODShiLtJ_P0067233 Gm12888 protein_coding protein_coding MGP_NODShiLtJ_T0069241.1 MGP_NODShiLtJ_G0028988.1 mouse_genomes_project 4 171040568 171170457 - MGP_NODShiLtJ_P0069241 Ajap1 protein_coding protein_coding MGP_NODShiLtJ_T0069242.1 MGP_NODShiLtJ_G0028988.1 mouse_genomes_project 4 171041572 171169732 - MGP_NODShiLtJ_P0069242 Ajap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011450.1 MGP_NODShiLtJ_G0009583.1 mouse_genomes_project 4 36932328 36932433 + Gm23466 misc_RNA misc_RNA MGP_NODShiLtJ_T0017910.1 MGP_NODShiLtJ_G0015419.1 mouse_genomes_project 4 96310190 96613199 + processed_transcript processed_transcript MGP_NODShiLtJ_T0100553.1 MGP_NODShiLtJ_G0038947.1 mouse_genomes_project 4 81870821 81870954 - Gm24170 snoRNA snoRNA MGP_NODShiLtJ_T0101137.1 MGP_NODShiLtJ_G0039471.1 mouse_genomes_project 4 147019868 147020390 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0066339.1 MGP_NODShiLtJ_G0028338.1 mouse_genomes_project 4 120562761 120573626 + MGP_NODShiLtJ_P0066339 Cdcp2 protein_coding protein_coding MGP_NODShiLtJ_T0068845.1 MGP_NODShiLtJ_G0028919.1 mouse_genomes_project 4 165147187 165168940 + MGP_NODShiLtJ_P0068845 Mthfr protein_coding protein_coding MGP_NODShiLtJ_T0068846.1 MGP_NODShiLtJ_G0028919.1 mouse_genomes_project 4 165147270 165157342 + MGP_NODShiLtJ_P0068846 Mthfr protein_coding protein_coding MGP_NODShiLtJ_T0068847.1 MGP_NODShiLtJ_G0028919.1 mouse_genomes_project 4 165148918 165154371 + Mthfr protein_coding retained_intron MGP_NODShiLtJ_T0068848.1 MGP_NODShiLtJ_G0028919.1 mouse_genomes_project 4 165149302 165172283 + MGP_NODShiLtJ_P0068848 Mthfr protein_coding protein_coding MGP_NODShiLtJ_T0068849.1 MGP_NODShiLtJ_G0028919.1 mouse_genomes_project 4 165152201 165172283 + MGP_NODShiLtJ_P0068849 Mthfr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068850.1 MGP_NODShiLtJ_G0028919.1 mouse_genomes_project 4 165152516 165154792 + Mthfr protein_coding retained_intron MGP_NODShiLtJ_T0068851.1 MGP_NODShiLtJ_G0028919.1 mouse_genomes_project 4 165165437 165172280 + MGP_NODShiLtJ_P0068851 Mthfr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004388.1 MGP_NODShiLtJ_G0003821.1 mouse_genomes_project 4 48028798 48031958 + antisense antisense MGP_NODShiLtJ_T0014394.1 MGP_NODShiLtJ_G0012502.1 mouse_genomes_project 4 45203595 45203929 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065080.1 MGP_NODShiLtJ_G0028033.1 mouse_genomes_project 4 48159567 48233607 + Reck protein_coding processed_transcript MGP_NODShiLtJ_T0065081.1 MGP_NODShiLtJ_G0028033.1 mouse_genomes_project 4 48159567 48233668 + MGP_NODShiLtJ_P0065081 Reck protein_coding protein_coding MGP_NODShiLtJ_T0065082.1 MGP_NODShiLtJ_G0028033.1 mouse_genomes_project 4 48229269 48231244 + Reck protein_coding processed_transcript MGP_NODShiLtJ_T0067371.1 MGP_NODShiLtJ_G0028567.1 mouse_genomes_project 4 139769675 139777052 + MGP_NODShiLtJ_P0067371 Snip1 protein_coding protein_coding MGP_NODShiLtJ_T0067372.1 MGP_NODShiLtJ_G0028567.1 mouse_genomes_project 4 139769705 139774308 + Snip1 protein_coding processed_transcript MGP_NODShiLtJ_T0065674.1 MGP_NODShiLtJ_G0028184.1 mouse_genomes_project 4 70509948 70571063 - MGP_NODShiLtJ_P0065674 Tnc protein_coding protein_coding MGP_NODShiLtJ_T0065675.1 MGP_NODShiLtJ_G0028184.1 mouse_genomes_project 4 70509948 70597990 - MGP_NODShiLtJ_P0065675 Tnc protein_coding protein_coding MGP_NODShiLtJ_T0065676.1 MGP_NODShiLtJ_G0028184.1 mouse_genomes_project 4 70509948 70571063 - MGP_NODShiLtJ_P0065676 Tnc protein_coding protein_coding MGP_NODShiLtJ_T0065677.1 MGP_NODShiLtJ_G0028184.1 mouse_genomes_project 4 70563002 70571063 - MGP_NODShiLtJ_P0065677 Tnc protein_coding protein_coding MGP_NODShiLtJ_T0014698.1 MGP_NODShiLtJ_G0012806.1 mouse_genomes_project 4 161247262 161247809 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066173.1 MGP_NODShiLtJ_G0028306.1 mouse_genomes_project 4 115051915 115059277 + MGP_NODShiLtJ_P0066173 Gm12789 protein_coding protein_coding MGP_NODShiLtJ_T0066174.1 MGP_NODShiLtJ_G0028306.1 mouse_genomes_project 4 115056278 115059316 + MGP_NODShiLtJ_P0066174 Gm12789 protein_coding protein_coding MGP_NODShiLtJ_T0099247.1 MGP_NODShiLtJ_G0037641.1 mouse_genomes_project 4 26347611 26347717 + Gm24965 snRNA snRNA MGP_NODShiLtJ_T0100534.1 MGP_NODShiLtJ_G0038928.1 mouse_genomes_project 4 52556743 52556886 + Gm22670 snoRNA snoRNA MGP_NODShiLtJ_T0067373.1 MGP_NODShiLtJ_G0028568.1 mouse_genomes_project 4 139788674 139818287 + MGP_NODShiLtJ_P0067373 Meaf6 protein_coding protein_coding MGP_NODShiLtJ_T0067374.1 MGP_NODShiLtJ_G0028568.1 mouse_genomes_project 4 139788691 139814966 + MGP_NODShiLtJ_P0067374 Meaf6 protein_coding protein_coding MGP_NODShiLtJ_T0067375.1 MGP_NODShiLtJ_G0028568.1 mouse_genomes_project 4 139788704 139814791 + MGP_NODShiLtJ_P0067375 Meaf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067376.1 MGP_NODShiLtJ_G0028568.1 mouse_genomes_project 4 139788705 139793701 + Meaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0067377.1 MGP_NODShiLtJ_G0028568.1 mouse_genomes_project 4 139788801 139814529 + MGP_NODShiLtJ_P0067377 Meaf6 protein_coding protein_coding MGP_NODShiLtJ_T0067378.1 MGP_NODShiLtJ_G0028568.1 mouse_genomes_project 4 139789728 139814534 + MGP_NODShiLtJ_P0067378 Meaf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067379.1 MGP_NODShiLtJ_G0028568.1 mouse_genomes_project 4 139793438 139808638 + Meaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0067380.1 MGP_NODShiLtJ_G0028568.1 mouse_genomes_project 4 139813044 139814505 + Meaf6 protein_coding retained_intron MGP_NODShiLtJ_T0010523.1 MGP_NODShiLtJ_G0008656.1 mouse_genomes_project 4 144857113 144857239 - Gm28017 miRNA miRNA MGP_NODShiLtJ_T0064592.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 34912300 35033081 + MGP_NODShiLtJ_P0064592 Mdn1 protein_coding protein_coding MGP_NODShiLtJ_T0064593.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 34912300 35033091 + MGP_NODShiLtJ_P0064593 Mdn1 protein_coding protein_coding MGP_NODShiLtJ_T0064594.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 34912364 34919349 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064595.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 34926744 34934793 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064596.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 34950768 34951825 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064597.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 34961957 35033072 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064598.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 34980215 34988759 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064599.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 34983178 34985534 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064600.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 35007825 35011129 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064601.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 35007825 35008909 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064602.1 MGP_NODShiLtJ_G0027925.1 mouse_genomes_project 4 35020695 35023026 + Mdn1 protein_coding processed_transcript MGP_NODShiLtJ_T0064874.1 MGP_NODShiLtJ_G0027999.1 mouse_genomes_project 4 47169050 47170769 + 1700022I11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0064875.1 MGP_NODShiLtJ_G0027999.1 mouse_genomes_project 4 47169077 47170735 + MGP_NODShiLtJ_P0064875 1700022I11Rik protein_coding protein_coding MGP_NODShiLtJ_T0064876.1 MGP_NODShiLtJ_G0027999.1 mouse_genomes_project 4 47169378 47170925 + MGP_NODShiLtJ_P0064876 1700022I11Rik protein_coding protein_coding MGP_NODShiLtJ_T0064877.1 MGP_NODShiLtJ_G0027999.1 mouse_genomes_project 4 47169390 47184170 + MGP_NODShiLtJ_P0064877 1700022I11Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064878.1 MGP_NODShiLtJ_G0027999.1 mouse_genomes_project 4 47169390 47173763 + MGP_NODShiLtJ_P0064878 1700022I11Rik protein_coding protein_coding MGP_NODShiLtJ_T0014488.1 MGP_NODShiLtJ_G0012596.1 mouse_genomes_project 4 84748415 84749311 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014565.1 MGP_NODShiLtJ_G0012673.1 mouse_genomes_project 4 117163295 117164278 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014262.1 MGP_NODShiLtJ_G0012370.1 mouse_genomes_project 4 488066 488636 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010480.1 MGP_NODShiLtJ_G0008613.1 mouse_genomes_project 4 39578347 39578428 - Mir876 miRNA miRNA MGP_NODShiLtJ_T0004373.1 MGP_NODShiLtJ_G0003809.1 mouse_genomes_project 4 24938860 24946525 + Gm11899 antisense antisense MGP_NODShiLtJ_T0100549.1 MGP_NODShiLtJ_G0038943.1 mouse_genomes_project 4 71004884 71005013 + Gm23950 snoRNA snoRNA MGP_NODShiLtJ_T0011472.1 MGP_NODShiLtJ_G0009605.1 mouse_genomes_project 4 130708350 130708617 + Gm25435 misc_RNA misc_RNA MGP_NODShiLtJ_T0014276.1 MGP_NODShiLtJ_G0012384.1 mouse_genomes_project 4 6149609 6150007 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014463.1 MGP_NODShiLtJ_G0012571.1 mouse_genomes_project 4 75621384 75623429 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067126.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133334666 133378448 - Ccdc30 protein_coding retained_intron MGP_NODShiLtJ_T0067127.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133335616 133445730 - MGP_NODShiLtJ_P0067127 Ccdc30 protein_coding protein_coding MGP_NODShiLtJ_T0067128.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133349235 133445714 - MGP_NODShiLtJ_P0067128 Ccdc30 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067129.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133354279 133370702 - Ccdc30 protein_coding retained_intron MGP_NODShiLtJ_T0067130.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133363135 133378548 - Ccdc30 protein_coding retained_intron MGP_NODShiLtJ_T0067131.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133369843 133402674 - MGP_NODShiLtJ_P0067131 Ccdc30 protein_coding protein_coding MGP_NODShiLtJ_T0067132.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133369844 133378241 - Ccdc30 protein_coding processed_transcript MGP_NODShiLtJ_T0067133.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133370791 133414850 - MGP_NODShiLtJ_P0067133 Ccdc30 protein_coding protein_coding MGP_NODShiLtJ_T0067134.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133378352 133396389 - Ccdc30 protein_coding processed_transcript MGP_NODShiLtJ_T0067135.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133386258 133402748 - Ccdc30 protein_coding processed_transcript MGP_NODShiLtJ_T0067136.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133386260 133398353 - Ccdc30 protein_coding retained_intron MGP_NODShiLtJ_T0067137.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133386268 133402674 - MGP_NODShiLtJ_P0067137 Ccdc30 protein_coding protein_coding MGP_NODShiLtJ_T0067138.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133392632 133402660 - Ccdc30 protein_coding retained_intron MGP_NODShiLtJ_T0067139.1 MGP_NODShiLtJ_G0028503.1 mouse_genomes_project 4 133414067 133423179 - Ccdc30 protein_coding processed_transcript MGP_NODShiLtJ_T0065279.1 MGP_NODShiLtJ_G0028072.1 mouse_genomes_project 4 51665580 51694620 + MGP_NODShiLtJ_P0065279 Galnt12 protein_coding protein_coding MGP_NODShiLtJ_T0066735.1 MGP_NODShiLtJ_G0028418.1 mouse_genomes_project 4 129571972 129580400 + MGP_NODShiLtJ_P0066735 6430628N08Rik protein_coding protein_coding MGP_NODShiLtJ_T0014280.1 MGP_NODShiLtJ_G0012388.1 mouse_genomes_project 4 7926488 7926779 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100541.1 MGP_NODShiLtJ_G0038935.1 mouse_genomes_project 4 61247599 61247733 - Gm22150 snoRNA snoRNA MGP_NODShiLtJ_T0014449.1 MGP_NODShiLtJ_G0012557.1 mouse_genomes_project 4 65162880 65163625 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066260.1 MGP_NODShiLtJ_G0028322.1 mouse_genomes_project 4 118467895 118548589 + MGP_NODShiLtJ_P0066260 Plpp3 protein_coding protein_coding MGP_NODShiLtJ_T0064638.1 MGP_NODShiLtJ_G0027938.1 mouse_genomes_project 4 36471959 36498871 - MGP_NODShiLtJ_P0064638 Spaca1 protein_coding protein_coding MGP_NODShiLtJ_T0064639.1 MGP_NODShiLtJ_G0027938.1 mouse_genomes_project 4 36471961 36489840 - MGP_NODShiLtJ_P0064639 Spaca1 protein_coding protein_coding MGP_NODShiLtJ_T0064640.1 MGP_NODShiLtJ_G0027938.1 mouse_genomes_project 4 36475398 36499023 - MGP_NODShiLtJ_P0064640 Spaca1 protein_coding protein_coding MGP_NODShiLtJ_T0014673.1 MGP_NODShiLtJ_G0012781.1 mouse_genomes_project 4 151354319 151354797 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007865.1 MGP_NODShiLtJ_G0006423.1 mouse_genomes_project 4 129496639 129500447 + Gm12847 lincRNA lincRNA MGP_NODShiLtJ_T0017909.1 MGP_NODShiLtJ_G0015418.1 mouse_genomes_project 4 80160480 80175454 + C630043F03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0014277.1 MGP_NODShiLtJ_G0012385.1 mouse_genomes_project 4 7240222 7241145 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007935.1 MGP_NODShiLtJ_G0006468.1 mouse_genomes_project 4 152827870 152828871 - Gm13001 lincRNA lincRNA MGP_NODShiLtJ_T0064470.1 MGP_NODShiLtJ_G0027897.1 mouse_genomes_project 4 18842761 18951043 - MGP_NODShiLtJ_P0064470 Wwp1 protein_coding protein_coding MGP_NODShiLtJ_T0064471.1 MGP_NODShiLtJ_G0027897.1 mouse_genomes_project 4 18844131 18918735 - MGP_NODShiLtJ_P0064471 Wwp1 protein_coding protein_coding MGP_NODShiLtJ_T0066984.1 MGP_NODShiLtJ_G0028464.1 mouse_genomes_project 4 131756052 131758944 - MGP_NODShiLtJ_P0066984 Atp6v0b protein_coding protein_coding MGP_NODShiLtJ_T0066985.1 MGP_NODShiLtJ_G0028464.1 mouse_genomes_project 4 131756058 131757600 - Atp6v0b protein_coding retained_intron MGP_NODShiLtJ_T0066986.1 MGP_NODShiLtJ_G0028464.1 mouse_genomes_project 4 131756173 131757506 - Atp6v0b protein_coding retained_intron MGP_NODShiLtJ_T0066987.1 MGP_NODShiLtJ_G0028464.1 mouse_genomes_project 4 131756869 131758342 - Atp6v0b protein_coding retained_intron MGP_NODShiLtJ_T0066988.1 MGP_NODShiLtJ_G0028464.1 mouse_genomes_project 4 131756936 131758264 - MGP_NODShiLtJ_P0066988 Atp6v0b protein_coding protein_coding MGP_NODShiLtJ_T0066989.1 MGP_NODShiLtJ_G0028464.1 mouse_genomes_project 4 131757340 131758995 - MGP_NODShiLtJ_P0066989 Atp6v0b protein_coding protein_coding MGP_NODShiLtJ_T0066990.1 MGP_NODShiLtJ_G0028464.1 mouse_genomes_project 4 131757986 131759041 - MGP_NODShiLtJ_P0066990 Atp6v0b protein_coding protein_coding MGP_NODShiLtJ_T0014714.1 MGP_NODShiLtJ_G0012822.1 mouse_genomes_project 4 167134783 167135340 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069206.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169893286 169900653 + Rpl22 protein_coding processed_transcript MGP_NODShiLtJ_T0069207.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169893397 169900657 + MGP_NODShiLtJ_P0069207 Rpl22 protein_coding protein_coding MGP_NODShiLtJ_T0069208.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169893411 169902248 + MGP_NODShiLtJ_P0069208 Rpl22 protein_coding protein_coding MGP_NODShiLtJ_T0069209.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169893413 169902247 + MGP_NODShiLtJ_P0069209 Rpl22 protein_coding protein_coding MGP_NODShiLtJ_T0069210.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169893428 169902252 + MGP_NODShiLtJ_P0069210 Rpl22 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069211.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169894611 169898223 + Rpl22 protein_coding processed_transcript MGP_NODShiLtJ_T0069212.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169894670 169898452 + Rpl22 protein_coding processed_transcript MGP_NODShiLtJ_T0069213.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169895024 169900650 + Rpl22 protein_coding processed_transcript MGP_NODShiLtJ_T0069214.1 MGP_NODShiLtJ_G0028984.1 mouse_genomes_project 4 169895101 169900651 + Rpl22 protein_coding processed_transcript MGP_NODShiLtJ_T0014438.1 MGP_NODShiLtJ_G0012546.1 mouse_genomes_project 4 61012352 61012812 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007869.1 MGP_NODShiLtJ_G0006427.1 mouse_genomes_project 4 132983603 132984429 - Gm12862 lincRNA lincRNA MGP_NODShiLtJ_T0001386.1 MGP_NODShiLtJ_G0001306.1 mouse_genomes_project 4 119690897 119691929 - TEC TEC MGP_NODShiLtJ_T0065692.1 MGP_NODShiLtJ_G0028190.1 mouse_genomes_project 4 77831607 78028821 - MGP_NODShiLtJ_P0065692 Cdk5rap2 protein_coding protein_coding MGP_NODShiLtJ_T0065693.1 MGP_NODShiLtJ_G0028190.1 mouse_genomes_project 4 77837761 78028796 - MGP_NODShiLtJ_P0065693 Cdk5rap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065694.1 MGP_NODShiLtJ_G0028190.1 mouse_genomes_project 4 77852981 77882792 - MGP_NODShiLtJ_P0065694 Cdk5rap2 protein_coding protein_coding MGP_NODShiLtJ_T0065695.1 MGP_NODShiLtJ_G0028190.1 mouse_genomes_project 4 77857102 77858484 - Cdk5rap2 protein_coding processed_transcript MGP_NODShiLtJ_T0065696.1 MGP_NODShiLtJ_G0028190.1 mouse_genomes_project 4 78017243 78021899 - Cdk5rap2 protein_coding processed_transcript MGP_NODShiLtJ_T0068756.1 MGP_NODShiLtJ_G0028881.1 mouse_genomes_project 4 160258923 160698482 + MGP_NODShiLtJ_P0068756 protein_coding protein_coding MGP_NODShiLtJ_T0007871.1 MGP_NODShiLtJ_G0006429.1 mouse_genomes_project 4 134748456 134755327 + Gm12860 lincRNA lincRNA MGP_NODShiLtJ_T0004411.1 MGP_NODShiLtJ_G0003842.1 mouse_genomes_project 4 94005011 94018262 - Gm11413 antisense antisense MGP_NODShiLtJ_T0014722.1 MGP_NODShiLtJ_G0012830.1 mouse_genomes_project 4 173339882 173340273 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065388.1 MGP_NODShiLtJ_G0028105.1 mouse_genomes_project 4 58621982 58766630 - MGP_NODShiLtJ_P0065388 Abca1 protein_coding protein_coding MGP_NODShiLtJ_T0065389.1 MGP_NODShiLtJ_G0028105.1 mouse_genomes_project 4 58626683 58632129 - Abca1 protein_coding processed_transcript MGP_NODShiLtJ_T0067721.1 MGP_NODShiLtJ_G0028641.1 mouse_genomes_project 4 144762774 144787195 - MGP_NODShiLtJ_P0067721 Tmem39b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067722.1 MGP_NODShiLtJ_G0028641.1 mouse_genomes_project 4 144762774 144787237 - MGP_NODShiLtJ_P0067722 Tmem39b protein_coding protein_coding MGP_NODShiLtJ_T0067723.1 MGP_NODShiLtJ_G0028641.1 mouse_genomes_project 4 144763018 144765358 - Tmem39b protein_coding retained_intron MGP_NODShiLtJ_T0067724.1 MGP_NODShiLtJ_G0028641.1 mouse_genomes_project 4 144781200 144787019 - MGP_NODShiLtJ_P0067724 Tmem39b protein_coding protein_coding MGP_NODShiLtJ_T0067725.1 MGP_NODShiLtJ_G0028641.1 mouse_genomes_project 4 144781276 144787143 - MGP_NODShiLtJ_P0067725 Tmem39b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065071.1 MGP_NODShiLtJ_G0028026.1 mouse_genomes_project 4 47965824 47971627 - MGP_NODShiLtJ_P0065071 Olfr70 protein_coding protein_coding MGP_NODShiLtJ_T0064852.1 MGP_NODShiLtJ_G0027992.1 mouse_genomes_project 4 46791294 46792427 + MGP_NODShiLtJ_P0064852 protein_coding protein_coding MGP_NODShiLtJ_T0065189.1 MGP_NODShiLtJ_G0028050.1 mouse_genomes_project 4 49759899 49806504 + MGP_NODShiLtJ_P0065189 Dcaf10 protein_coding protein_coding MGP_NODShiLtJ_T0065190.1 MGP_NODShiLtJ_G0028050.1 mouse_genomes_project 4 49759918 49796578 + Dcaf10 protein_coding processed_transcript MGP_NODShiLtJ_T0065191.1 MGP_NODShiLtJ_G0028050.1 mouse_genomes_project 4 49759980 49801701 + Dcaf10 protein_coding processed_transcript MGP_NODShiLtJ_T0065192.1 MGP_NODShiLtJ_G0028050.1 mouse_genomes_project 4 49796444 49802412 + MGP_NODShiLtJ_P0065192 Dcaf10 protein_coding protein_coding MGP_NODShiLtJ_T0099329.1 MGP_NODShiLtJ_G0037723.1 mouse_genomes_project 4 173908470 173908571 - Gm25982 snRNA snRNA MGP_NODShiLtJ_T0014709.1 MGP_NODShiLtJ_G0012817.1 mouse_genomes_project 4 165212771 165213167 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001392.1 MGP_NODShiLtJ_G0001312.1 mouse_genomes_project 4 151033736 151034066 + TEC TEC MGP_NODShiLtJ_T0100533.1 MGP_NODShiLtJ_G0038927.1 mouse_genomes_project 4 51023372 51023503 + Gm22247 snoRNA snoRNA MGP_NODShiLtJ_T0066188.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115892417 116023700 + Sgip1 protein_coding retained_intron MGP_NODShiLtJ_T0066189.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906453 116130845 + MGP_NODShiLtJ_P0066189 Sgip1 protein_coding protein_coding MGP_NODShiLtJ_T0066190.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906646 116016590 + Sgip1 protein_coding processed_transcript MGP_NODShiLtJ_T0066191.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906663 116130239 + MGP_NODShiLtJ_P0066191 Sgip1 protein_coding protein_coding MGP_NODShiLtJ_T0066192.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906670 116022682 + MGP_NODShiLtJ_P0066192 Sgip1 protein_coding protein_coding MGP_NODShiLtJ_T0066193.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906673 116014026 + Sgip1 protein_coding processed_transcript MGP_NODShiLtJ_T0066194.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906681 116129553 + MGP_NODShiLtJ_P0066194 Sgip1 protein_coding protein_coding MGP_NODShiLtJ_T0066195.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906693 116022995 + Sgip1 protein_coding processed_transcript MGP_NODShiLtJ_T0066196.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906783 116076583 + MGP_NODShiLtJ_P0066196 Sgip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066197.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 115906843 116132490 + MGP_NODShiLtJ_P0066197 Sgip1 protein_coding protein_coding MGP_NODShiLtJ_T0066198.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 116023437 116128979 + MGP_NODShiLtJ_P0066198 Sgip1 protein_coding protein_coding MGP_NODShiLtJ_T0066199.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 116078762 116086207 + Sgip1 protein_coding processed_transcript MGP_NODShiLtJ_T0066200.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 116084657 116086380 + Sgip1 protein_coding processed_transcript MGP_NODShiLtJ_T0066201.1 MGP_NODShiLtJ_G0028308.1 mouse_genomes_project 4 116120811 116126370 + Sgip1 protein_coding processed_transcript MGP_NODShiLtJ_T0007762.1 MGP_NODShiLtJ_G0006340.1 mouse_genomes_project 4 44313366 44317852 + 4930509K18Rik lincRNA lincRNA MGP_NODShiLtJ_T0066134.1 MGP_NODShiLtJ_G0028296.1 mouse_genomes_project 4 113746560 113990389 + MGP_NODShiLtJ_P0066134 Cachd1 protein_coding protein_coding MGP_NODShiLtJ_T0066135.1 MGP_NODShiLtJ_G0028296.1 mouse_genomes_project 4 113746560 114010169 + MGP_NODShiLtJ_P0066135 Cachd1 protein_coding protein_coding MGP_NODShiLtJ_T0066136.1 MGP_NODShiLtJ_G0028296.1 mouse_genomes_project 4 113980436 113988908 + Cachd1 protein_coding processed_transcript MGP_NODShiLtJ_T0066137.1 MGP_NODShiLtJ_G0028296.1 mouse_genomes_project 4 113980535 113989078 + Cachd1 protein_coding processed_transcript MGP_NODShiLtJ_T0064586.1 MGP_NODShiLtJ_G0027923.1 mouse_genomes_project 4 34850984 34854395 - MGP_NODShiLtJ_P0064586 Gja10 protein_coding protein_coding MGP_NODShiLtJ_T0067487.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141709126 141785506 - MGP_NODShiLtJ_P0067487 Zmym4 protein_coding protein_coding MGP_NODShiLtJ_T0067488.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141709126 141836852 - MGP_NODShiLtJ_P0067488 Zmym4 protein_coding protein_coding MGP_NODShiLtJ_T0067489.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141716484 141718272 - Zmym4 protein_coding processed_transcript MGP_NODShiLtJ_T0067490.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141758648 141772733 - Zmym4 protein_coding processed_transcript MGP_NODShiLtJ_T0067491.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141763846 141772621 - Zmym4 protein_coding processed_transcript MGP_NODShiLtJ_T0067492.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141772450 141785554 - Zmym4 protein_coding processed_transcript MGP_NODShiLtJ_T0067493.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141785192 141787937 - Zmym4 protein_coding processed_transcript MGP_NODShiLtJ_T0067494.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141787935 141836616 - Zmym4 protein_coding processed_transcript MGP_NODShiLtJ_T0067495.1 MGP_NODShiLtJ_G0028593.1 mouse_genomes_project 4 141787968 141836640 - Zmym4 protein_coding processed_transcript MGP_NODShiLtJ_T0066641.1 MGP_NODShiLtJ_G0028389.1 mouse_genomes_project 4 126058795 126126430 + MGP_NODShiLtJ_P0066641 Skint7 protein_coding protein_coding MGP_NODShiLtJ_T0066642.1 MGP_NODShiLtJ_G0028389.1 mouse_genomes_project 4 126058799 126129577 + MGP_NODShiLtJ_P0066642 Skint7 protein_coding protein_coding MGP_NODShiLtJ_T0066643.1 MGP_NODShiLtJ_G0028389.1 mouse_genomes_project 4 126058799 126123793 + MGP_NODShiLtJ_P0066643 Skint7 protein_coding protein_coding MGP_NODShiLtJ_T0066645.1 MGP_NODShiLtJ_G0028389.1 mouse_genomes_project 4 126125397 126127869 + Skint7 protein_coding retained_intron MGP_NODShiLtJ_T0017919.1 MGP_NODShiLtJ_G0015426.1 mouse_genomes_project 4 107988460 107991909 + Gm12707 processed_transcript processed_transcript MGP_NODShiLtJ_T0067571.1 MGP_NODShiLtJ_G0028614.1 mouse_genomes_project 4 144016833 144027173 + Ak2 protein_coding processed_transcript MGP_NODShiLtJ_T0067572.1 MGP_NODShiLtJ_G0028614.1 mouse_genomes_project 4 144018077 144036487 + MGP_NODShiLtJ_P0067572 Ak2 protein_coding protein_coding MGP_NODShiLtJ_T0067573.1 MGP_NODShiLtJ_G0028614.1 mouse_genomes_project 4 144018077 144033306 + MGP_NODShiLtJ_P0067573 Ak2 protein_coding protein_coding MGP_NODShiLtJ_T0067574.1 MGP_NODShiLtJ_G0028614.1 mouse_genomes_project 4 144018206 144033134 + MGP_NODShiLtJ_P0067574 Ak2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014631.1 MGP_NODShiLtJ_G0012739.1 mouse_genomes_project 4 136995359 136996395 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069447.1 MGP_NODShiLtJ_G0029023.1 mouse_genomes_project 4 173499834 173502563 - MGP_NODShiLtJ_P0069447 Mmp23 protein_coding protein_coding MGP_NODShiLtJ_T0069448.1 MGP_NODShiLtJ_G0029023.1 mouse_genomes_project 4 173499836 173501204 - Mmp23 protein_coding retained_intron MGP_NODShiLtJ_T0069449.1 MGP_NODShiLtJ_G0029023.1 mouse_genomes_project 4 173501431 173502386 - Mmp23 protein_coding retained_intron MGP_NODShiLtJ_T0069450.1 MGP_NODShiLtJ_G0029023.1 mouse_genomes_project 4 173501448 173502071 - Mmp23 protein_coding retained_intron MGP_NODShiLtJ_T0101906.1 MGP_NODShiLtJ_G0040074.1 mouse_genomes_project 4 58512052 58513004 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098387.1 MGP_NODShiLtJ_G0036792.1 mouse_genomes_project 4 169758731 169759186 + Gm13096 sense_intronic sense_intronic MGP_NODShiLtJ_T0014475.1 MGP_NODShiLtJ_G0012583.1 mouse_genomes_project 4 81158963 81167275 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067998.1 MGP_NODShiLtJ_G0028695.1 mouse_genomes_project 4 148553069 148568599 - MGP_NODShiLtJ_P0067998 Tmem222 protein_coding protein_coding MGP_NODShiLtJ_T0067999.1 MGP_NODShiLtJ_G0028695.1 mouse_genomes_project 4 148553854 148568469 - MGP_NODShiLtJ_P0067999 Tmem222 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068000.1 MGP_NODShiLtJ_G0028695.1 mouse_genomes_project 4 148553900 148568577 - MGP_NODShiLtJ_P0068000 Tmem222 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068001.1 MGP_NODShiLtJ_G0028695.1 mouse_genomes_project 4 148553911 148568425 - MGP_NODShiLtJ_P0068001 Tmem222 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068002.1 MGP_NODShiLtJ_G0028695.1 mouse_genomes_project 4 148553926 148557131 - Tmem222 protein_coding retained_intron MGP_NODShiLtJ_T0068003.1 MGP_NODShiLtJ_G0028695.1 mouse_genomes_project 4 148557906 148568558 - Tmem222 protein_coding retained_intron MGP_NODShiLtJ_T0004505.1 MGP_NODShiLtJ_G0003910.1 mouse_genomes_project 4 154325289 154327806 + AB041806 antisense antisense MGP_NODShiLtJ_T0014459.1 MGP_NODShiLtJ_G0012567.1 mouse_genomes_project 4 73200591 73200929 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010541.1 MGP_NODShiLtJ_G0008674.1 mouse_genomes_project 4 155679858 155679928 + Mir7020 miRNA miRNA MGP_NODShiLtJ_T0068312.1 MGP_NODShiLtJ_G0028766.1 mouse_genomes_project 4 151835334 151885153 + MGP_NODShiLtJ_P0068312 Asap3 protein_coding protein_coding MGP_NODShiLtJ_T0065934.1 MGP_NODShiLtJ_G0028244.1 mouse_genomes_project 4 99924987 99925560 + MGP_NODShiLtJ_P0065934 protein_coding protein_coding MGP_NODShiLtJ_T0007952.1 MGP_NODShiLtJ_G0006484.1 mouse_genomes_project 4 158652647 158692382 - Gm13052 lincRNA lincRNA MGP_NODShiLtJ_T0067052.1 MGP_NODShiLtJ_G0028478.1 mouse_genomes_project 4 132457018 132459806 - MGP_NODShiLtJ_P0067052 Tmem125 protein_coding protein_coding MGP_NODShiLtJ_T0067053.1 MGP_NODShiLtJ_G0028478.1 mouse_genomes_project 4 132457936 132460122 - MGP_NODShiLtJ_P0067053 Tmem125 protein_coding protein_coding MGP_NODShiLtJ_T0067054.1 MGP_NODShiLtJ_G0028478.1 mouse_genomes_project 4 132458094 132459040 - MGP_NODShiLtJ_P0067054 Tmem125 protein_coding protein_coding MGP_NODShiLtJ_T0067055.1 MGP_NODShiLtJ_G0028478.1 mouse_genomes_project 4 132458144 132459367 - MGP_NODShiLtJ_P0067055 Tmem125 protein_coding protein_coding MGP_NODShiLtJ_T0067056.1 MGP_NODShiLtJ_G0028478.1 mouse_genomes_project 4 132458679 132459327 - Tmem125 protein_coding processed_transcript MGP_NODShiLtJ_T0017958.1 MGP_NODShiLtJ_G0015447.1 mouse_genomes_project 4 157004477 157012304 + Gm13032 processed_transcript processed_transcript MGP_NODShiLtJ_T0068837.1 MGP_NODShiLtJ_G0028915.1 mouse_genomes_project 4 165010450 165016767 + MGP_NODShiLtJ_P0068837 2510039O18Rik protein_coding protein_coding MGP_NODShiLtJ_T0011469.1 MGP_NODShiLtJ_G0009602.1 mouse_genomes_project 4 126130339 126130665 - Gm25844 misc_RNA misc_RNA MGP_NODShiLtJ_T0014303.1 MGP_NODShiLtJ_G0012411.1 mouse_genomes_project 4 14222740 14222870 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007914.1 MGP_NODShiLtJ_G0006456.1 mouse_genomes_project 4 146798458 146815160 - Gm16080 lincRNA lincRNA MGP_NODShiLtJ_T0068690.1 MGP_NODShiLtJ_G0028857.1 mouse_genomes_project 4 157894705 157900522 - MGP_NODShiLtJ_P0068690 Slc25a34 protein_coding protein_coding MGP_NODShiLtJ_T0007950.1 MGP_NODShiLtJ_G0006482.1 mouse_genomes_project 4 157602177 157605223 + Gm13074 lincRNA lincRNA MGP_NODShiLtJ_T0065465.1 MGP_NODShiLtJ_G0028125.1 mouse_genomes_project 4 63519435 63865085 + MGP_NODShiLtJ_P0065465 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065467.1 MGP_NODShiLtJ_G0028125.1 mouse_genomes_project 4 63519586 63820361 + MGP_NODShiLtJ_P0065467 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065468.1 MGP_NODShiLtJ_G0028125.1 mouse_genomes_project 4 63592644 63862832 + MGP_NODShiLtJ_P0065468 protein_coding protein_coding MGP_NODShiLtJ_T0065474.1 MGP_NODShiLtJ_G0028125.1 mouse_genomes_project 4 63810161 63865087 + MGP_NODShiLtJ_P0065474 protein_coding protein_coding MGP_NODShiLtJ_T0007808.1 MGP_NODShiLtJ_G0006379.1 mouse_genomes_project 4 92253024 92257681 + Gm11412 lincRNA lincRNA MGP_NODShiLtJ_T0064796.1 MGP_NODShiLtJ_G0027976.1 mouse_genomes_project 4 45601509 45609037 - MGP_NODShiLtJ_P0064796 AI464131 protein_coding protein_coding MGP_NODShiLtJ_T0064797.1 MGP_NODShiLtJ_G0027976.1 mouse_genomes_project 4 45605436 45608629 - MGP_NODShiLtJ_P0064797 AI464131 protein_coding protein_coding MGP_NODShiLtJ_T0068471.1 MGP_NODShiLtJ_G0028804.1 mouse_genomes_project 4 154674027 154692871 - MGP_NODShiLtJ_P0068471 Ubxn10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068472.1 MGP_NODShiLtJ_G0028804.1 mouse_genomes_project 4 154686187 154692915 - MGP_NODShiLtJ_P0068472 Ubxn10 protein_coding protein_coding MGP_NODShiLtJ_T0068473.1 MGP_NODShiLtJ_G0028804.1 mouse_genomes_project 4 154686187 154704809 - MGP_NODShiLtJ_P0068473 Ubxn10 protein_coding protein_coding MGP_NODShiLtJ_T0068474.1 MGP_NODShiLtJ_G0028804.1 mouse_genomes_project 4 154686487 154692506 - MGP_NODShiLtJ_P0068474 Ubxn10 protein_coding protein_coding MGP_NODShiLtJ_T0068478.1 MGP_NODShiLtJ_G0028804.1 mouse_genomes_project 4 154699526 154704778 - Ubxn10 protein_coding processed_transcript MGP_NODShiLtJ_T0067226.1 MGP_NODShiLtJ_G0028526.1 mouse_genomes_project 4 135216002 135263854 - MGP_NODShiLtJ_P0067226 Zmpste24 protein_coding protein_coding MGP_NODShiLtJ_T0067227.1 MGP_NODShiLtJ_G0028526.1 mouse_genomes_project 4 135225796 135236691 - Zmpste24 protein_coding processed_transcript MGP_NODShiLtJ_T0067228.1 MGP_NODShiLtJ_G0028526.1 mouse_genomes_project 4 135241888 135261311 - MGP_NODShiLtJ_P0067228 Zmpste24 protein_coding protein_coding MGP_NODShiLtJ_T0065435.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62703846 62767837 - MGP_NODShiLtJ_P0065435 Ctnnal1 protein_coding protein_coding MGP_NODShiLtJ_T0065436.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62705051 62707231 - Ctnnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0065437.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62709900 62710568 - Ctnnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0065438.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62717890 62734829 - Ctnnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0065439.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62719835 62767817 - Ctnnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0065440.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62720098 62723569 - Ctnnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0065441.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62723240 62733746 - Ctnnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0065442.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62736858 62767803 - MGP_NODShiLtJ_P0065442 Ctnnal1 protein_coding protein_coding MGP_NODShiLtJ_T0065443.1 MGP_NODShiLtJ_G0028119.1 mouse_genomes_project 4 62740579 62742079 - Ctnnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0007753.1 MGP_NODShiLtJ_G0006331.1 mouse_genomes_project 4 23056446 23217545 + Gm11884 lincRNA lincRNA MGP_NODShiLtJ_T0064847.1 MGP_NODShiLtJ_G0027988.1 mouse_genomes_project 4 45911238 45913345 + MGP_NODShiLtJ_P0064847 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064848.1 MGP_NODShiLtJ_G0027988.1 mouse_genomes_project 4 45911238 45914095 + MGP_NODShiLtJ_P0064848 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064630.1 MGP_NODShiLtJ_G0027936.1 mouse_genomes_project 4 35646772 35856927 + MGP_NODShiLtJ_P0064630 Rngtt protein_coding protein_coding MGP_NODShiLtJ_T0064631.1 MGP_NODShiLtJ_G0027936.1 mouse_genomes_project 4 35646789 35855227 + MGP_NODShiLtJ_P0064631 Rngtt protein_coding protein_coding MGP_NODShiLtJ_T0064632.1 MGP_NODShiLtJ_G0027936.1 mouse_genomes_project 4 35659553 35663356 + Rngtt protein_coding processed_transcript MGP_NODShiLtJ_T0064633.1 MGP_NODShiLtJ_G0027936.1 mouse_genomes_project 4 35662215 35676443 + Rngtt protein_coding processed_transcript MGP_NODShiLtJ_T0064634.1 MGP_NODShiLtJ_G0027936.1 mouse_genomes_project 4 35668299 35696301 + Rngtt protein_coding processed_transcript MGP_NODShiLtJ_T0069154.1 MGP_NODShiLtJ_G0028976.1 mouse_genomes_project 4 169666217 169670403 + MGP_NODShiLtJ_P0069154 Tnfrsf25 protein_coding protein_coding MGP_NODShiLtJ_T0069155.1 MGP_NODShiLtJ_G0028976.1 mouse_genomes_project 4 169666626 169670395 + MGP_NODShiLtJ_P0069155 Tnfrsf25 protein_coding protein_coding MGP_NODShiLtJ_T0069156.1 MGP_NODShiLtJ_G0028976.1 mouse_genomes_project 4 169666682 169667270 + Tnfrsf25 protein_coding processed_transcript MGP_NODShiLtJ_T0069157.1 MGP_NODShiLtJ_G0028976.1 mouse_genomes_project 4 169668254 169669607 + Tnfrsf25 protein_coding processed_transcript MGP_NODShiLtJ_T0014421.1 MGP_NODShiLtJ_G0012529.1 mouse_genomes_project 4 57512014 57512314 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014578.1 MGP_NODShiLtJ_G0012686.1 mouse_genomes_project 4 121860921 121861717 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068774.1 MGP_NODShiLtJ_G0028891.1 mouse_genomes_project 4 160840700 160848412 - MGP_NODShiLtJ_P0068774 Oog1 protein_coding protein_coding MGP_NODShiLtJ_T0099261.1 MGP_NODShiLtJ_G0037655.1 mouse_genomes_project 4 48391320 48391432 - Gm22706 snRNA snRNA MGP_NODShiLtJ_T0066079.1 MGP_NODShiLtJ_G0028283.1 mouse_genomes_project 4 111644087 111649450 - MGP_NODShiLtJ_P0066079 I0C0044D17Rik protein_coding protein_coding MGP_NODShiLtJ_T0066080.1 MGP_NODShiLtJ_G0028283.1 mouse_genomes_project 4 111645425 111645935 - MGP_NODShiLtJ_P0066080 I0C0044D17Rik protein_coding protein_coding MGP_NODShiLtJ_T0067556.1 MGP_NODShiLtJ_G0028610.1 mouse_genomes_project 4 143756386 143770528 + MGP_NODShiLtJ_P0067556 A3galt2 protein_coding protein_coding MGP_NODShiLtJ_T0067557.1 MGP_NODShiLtJ_G0028610.1 mouse_genomes_project 4 143760280 143771238 + MGP_NODShiLtJ_P0067557 A3galt2 protein_coding protein_coding MGP_NODShiLtJ_T0007849.1 MGP_NODShiLtJ_G0006412.1 mouse_genomes_project 4 119480909 119499658 - Gm12729 lincRNA lincRNA MGP_NODShiLtJ_T0068167.1 MGP_NODShiLtJ_G0028733.1 mouse_genomes_project 4 150021846 150041252 + MGP_NODShiLtJ_P0068167 Aunip protein_coding protein_coding MGP_NODShiLtJ_T0014656.1 MGP_NODShiLtJ_G0012764.1 mouse_genomes_project 4 147223858 147224266 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066027.1 MGP_NODShiLtJ_G0028268.1 mouse_genomes_project 4 108636267 108678559 - MGP_NODShiLtJ_P0066027 Cyp2j12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066028.1 MGP_NODShiLtJ_G0028268.1 mouse_genomes_project 4 108636522 108678545 - MGP_NODShiLtJ_P0066028 Cyp2j12 protein_coding protein_coding MGP_NODShiLtJ_T0101131.1 MGP_NODShiLtJ_G0039467.1 mouse_genomes_project 4 7195935 7197368 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101132.1 MGP_NODShiLtJ_G0039467.1 mouse_genomes_project 4 7196608 7197606 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0014504.1 MGP_NODShiLtJ_G0012612.1 mouse_genomes_project 4 93213287 93213554 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007788.1 MGP_NODShiLtJ_G0006361.1 mouse_genomes_project 4 61397336 61432389 + Gm12506 lincRNA lincRNA MGP_NODShiLtJ_T0004467.1 MGP_NODShiLtJ_G0003881.1 mouse_genomes_project 4 137547282 137548447 - Gm12923 antisense antisense MGP_NODShiLtJ_T0014659.1 MGP_NODShiLtJ_G0012767.1 mouse_genomes_project 4 147285393 147285860 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007940.1 MGP_NODShiLtJ_G0006473.1 mouse_genomes_project 4 155978409 155981514 + lincRNA lincRNA MGP_NODShiLtJ_T0014472.1 MGP_NODShiLtJ_G0012580.1 mouse_genomes_project 4 79776945 79777939 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065743.1 MGP_NODShiLtJ_G0028202.1 mouse_genomes_project 4 90146510 90147029 - MGP_NODShiLtJ_P0065743 mt-Nd6 protein_coding protein_coding MGP_NODShiLtJ_T0067649.1 MGP_NODShiLtJ_G0028631.1 mouse_genomes_project 4 144597060 144608514 - MGP_NODShiLtJ_P0067649 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067650.1 MGP_NODShiLtJ_G0028631.1 mouse_genomes_project 4 144598331 144602677 - protein_coding retained_intron MGP_NODShiLtJ_T0067651.1 MGP_NODShiLtJ_G0028631.1 mouse_genomes_project 4 144602377 144607528 - protein_coding retained_intron MGP_NODShiLtJ_T0067652.1 MGP_NODShiLtJ_G0028631.1 mouse_genomes_project 4 144602524 144604463 - protein_coding retained_intron MGP_NODShiLtJ_T0067653.1 MGP_NODShiLtJ_G0028631.1 mouse_genomes_project 4 144602712 144604421 - protein_coding retained_intron MGP_NODShiLtJ_T0067654.1 MGP_NODShiLtJ_G0028631.1 mouse_genomes_project 4 144607117 144623611 - protein_coding retained_intron MGP_NODShiLtJ_T0064612.1 MGP_NODShiLtJ_G0027928.1 mouse_genomes_project 4 35246569 35247041 + MGP_NODShiLtJ_P0064612 protein_coding protein_coding MGP_NODShiLtJ_T0065308.1 MGP_NODShiLtJ_G0028079.1 mouse_genomes_project 4 52853541 52963852 - MGP_NODShiLtJ_P0065308 Erp44 protein_coding protein_coding MGP_NODShiLtJ_T0065309.1 MGP_NODShiLtJ_G0028079.1 mouse_genomes_project 4 52854708 52857243 - Erp44 protein_coding processed_transcript MGP_NODShiLtJ_T0065310.1 MGP_NODShiLtJ_G0028079.1 mouse_genomes_project 4 52854826 52963734 - MGP_NODShiLtJ_P0065310 Erp44 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068461.1 MGP_NODShiLtJ_G0028800.1 mouse_genomes_project 4 154324183 154326620 - MGP_NODShiLtJ_P0068461 Fam43b protein_coding protein_coding MGP_NODShiLtJ_T0007798.1 MGP_NODShiLtJ_G0006369.1 mouse_genomes_project 4 69143619 69157525 + Gm11210 lincRNA lincRNA MGP_NODShiLtJ_T0065887.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 97923516 98188545 - MGP_NODShiLtJ_P0065887 Slc24a2 protein_coding protein_coding MGP_NODShiLtJ_T0065888.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 97923521 98186036 - MGP_NODShiLtJ_P0065888 Slc24a2 protein_coding protein_coding MGP_NODShiLtJ_T0065889.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 97931565 98185946 - MGP_NODShiLtJ_P0065889 Slc24a2 protein_coding protein_coding MGP_NODShiLtJ_T0065890.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 97931565 98185950 - MGP_NODShiLtJ_P0065890 Slc24a2 protein_coding protein_coding MGP_NODShiLtJ_T0065891.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 97937405 97957367 - Slc24a2 protein_coding processed_transcript MGP_NODShiLtJ_T0065892.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 97974000 98126986 - MGP_NODShiLtJ_P0065892 Slc24a2 protein_coding protein_coding MGP_NODShiLtJ_T0065893.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 98018916 98188491 - Slc24a2 protein_coding processed_transcript MGP_NODShiLtJ_T0065894.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 98019304 98188490 - Slc24a2 protein_coding processed_transcript MGP_NODShiLtJ_T0065895.1 MGP_NODShiLtJ_G0028226.1 mouse_genomes_project 4 98126485 98188535 - Slc24a2 protein_coding processed_transcript MGP_NODShiLtJ_T0014368.1 MGP_NODShiLtJ_G0012476.1 mouse_genomes_project 4 36856363 36858440 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101911.1 MGP_NODShiLtJ_G0040079.1 mouse_genomes_project 4 99656059 99657747 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014658.1 MGP_NODShiLtJ_G0012766.1 mouse_genomes_project 4 147285389 147285860 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007864.1 MGP_NODShiLtJ_G0006422.1 mouse_genomes_project 4 128158402 128165180 + Gm12829 lincRNA lincRNA MGP_NODShiLtJ_T0014476.1 MGP_NODShiLtJ_G0012584.1 mouse_genomes_project 4 81661900 81663075 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011457.1 MGP_NODShiLtJ_G0009590.1 mouse_genomes_project 4 59338914 59339213 - Gm25445 misc_RNA misc_RNA MGP_NODShiLtJ_T0014410.1 MGP_NODShiLtJ_G0012518.1 mouse_genomes_project 4 52059995 52061317 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014719.1 MGP_NODShiLtJ_G0012827.1 mouse_genomes_project 4 171790445 171791135 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014668.1 MGP_NODShiLtJ_G0012776.1 mouse_genomes_project 4 149998604 149999357 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014295.1 MGP_NODShiLtJ_G0012403.1 mouse_genomes_project 4 13119555 13119882 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014406.1 MGP_NODShiLtJ_G0012514.1 mouse_genomes_project 4 50826411 50826822 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010487.1 MGP_NODShiLtJ_G0008620.1 mouse_genomes_project 4 48953639 48953717 - Mir5120 miRNA miRNA MGP_NODShiLtJ_T0065788.1 MGP_NODShiLtJ_G0028211.1 mouse_genomes_project 4 93833916 93951673 - MGP_NODShiLtJ_P0065788 Ttc39b protein_coding protein_coding MGP_NODShiLtJ_T0065789.1 MGP_NODShiLtJ_G0028211.1 mouse_genomes_project 4 93840045 93846797 - Ttc39b protein_coding retained_intron MGP_NODShiLtJ_T0065790.1 MGP_NODShiLtJ_G0028211.1 mouse_genomes_project 4 93853402 93951657 - MGP_NODShiLtJ_P0065790 Ttc39b protein_coding protein_coding MGP_NODShiLtJ_T0065791.1 MGP_NODShiLtJ_G0028211.1 mouse_genomes_project 4 93863268 93884611 - Ttc39b protein_coding processed_transcript MGP_NODShiLtJ_T0065792.1 MGP_NODShiLtJ_G0028211.1 mouse_genomes_project 4 93868641 93904997 - MGP_NODShiLtJ_P0065792 Ttc39b protein_coding protein_coding MGP_NODShiLtJ_T0065793.1 MGP_NODShiLtJ_G0028211.1 mouse_genomes_project 4 93876084 93951607 - MGP_NODShiLtJ_P0065793 Ttc39b protein_coding protein_coding MGP_NODShiLtJ_T0065794.1 MGP_NODShiLtJ_G0028211.1 mouse_genomes_project 4 93876215 93899276 - MGP_NODShiLtJ_P0065794 Ttc39b protein_coding protein_coding MGP_NODShiLtJ_T0067595.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144193081 144235130 - MGP_NODShiLtJ_P0067595 S100pbp protein_coding protein_coding MGP_NODShiLtJ_T0067596.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144193081 144235093 - MGP_NODShiLtJ_P0067596 S100pbp protein_coding protein_coding MGP_NODShiLtJ_T0067597.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144193081 144235278 - MGP_NODShiLtJ_P0067597 S100pbp protein_coding protein_coding MGP_NODShiLtJ_T0067598.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144194465 144228083 - MGP_NODShiLtJ_P0067598 S100pbp protein_coding protein_coding MGP_NODShiLtJ_T0067599.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144195644 144235128 - S100pbp protein_coding processed_transcript MGP_NODShiLtJ_T0067600.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144195923 144235128 - S100pbp protein_coding retained_intron MGP_NODShiLtJ_T0067601.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144195923 144225970 - S100pbp protein_coding retained_intron MGP_NODShiLtJ_T0067602.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144196129 144235063 - MGP_NODShiLtJ_P0067602 S100pbp protein_coding protein_coding MGP_NODShiLtJ_T0067603.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144196129 144235160 - MGP_NODShiLtJ_P0067603 S100pbp protein_coding protein_coding MGP_NODShiLtJ_T0067604.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144208074 144235168 - S100pbp protein_coding processed_transcript MGP_NODShiLtJ_T0067605.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144213845 144223852 - S100pbp protein_coding processed_transcript MGP_NODShiLtJ_T0067606.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144222711 144235177 - MGP_NODShiLtJ_P0067606 S100pbp protein_coding protein_coding MGP_NODShiLtJ_T0067607.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144227294 144235221 - S100pbp protein_coding processed_transcript MGP_NODShiLtJ_T0067608.1 MGP_NODShiLtJ_G0028619.1 mouse_genomes_project 4 144227352 144235049 - S100pbp protein_coding processed_transcript MGP_NODShiLtJ_T0068601.1 MGP_NODShiLtJ_G0028839.1 mouse_genomes_project 4 157211882 157218378 + MGP_NODShiLtJ_P0068601 Mfap2 protein_coding protein_coding MGP_NODShiLtJ_T0068602.1 MGP_NODShiLtJ_G0028839.1 mouse_genomes_project 4 157212098 157217576 + Mfap2 protein_coding processed_transcript MGP_NODShiLtJ_T0068603.1 MGP_NODShiLtJ_G0028839.1 mouse_genomes_project 4 157212105 157218548 + MGP_NODShiLtJ_P0068603 Mfap2 protein_coding protein_coding MGP_NODShiLtJ_T0065396.1 MGP_NODShiLtJ_G0028107.1 mouse_genomes_project 4 59252035 59323809 + MGP_NODShiLtJ_P0065396 Fsd1l protein_coding protein_coding MGP_NODShiLtJ_T0065397.1 MGP_NODShiLtJ_G0028107.1 mouse_genomes_project 4 59252054 59272312 + Fsd1l protein_coding retained_intron MGP_NODShiLtJ_T0065398.1 MGP_NODShiLtJ_G0028107.1 mouse_genomes_project 4 59252055 59268464 + Fsd1l protein_coding retained_intron MGP_NODShiLtJ_T0065399.1 MGP_NODShiLtJ_G0028107.1 mouse_genomes_project 4 59252133 59316771 + MGP_NODShiLtJ_P0065399 Fsd1l protein_coding protein_coding MGP_NODShiLtJ_T0065400.1 MGP_NODShiLtJ_G0028107.1 mouse_genomes_project 4 59252138 59316769 + MGP_NODShiLtJ_P0065400 Fsd1l protein_coding protein_coding MGP_NODShiLtJ_T0065401.1 MGP_NODShiLtJ_G0028107.1 mouse_genomes_project 4 59252280 59280268 + MGP_NODShiLtJ_P0065401 Fsd1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065402.1 MGP_NODShiLtJ_G0028107.1 mouse_genomes_project 4 59263844 59323809 + MGP_NODShiLtJ_P0065402 Fsd1l protein_coding protein_coding MGP_NODShiLtJ_T0007915.1 MGP_NODShiLtJ_G0006457.1 mouse_genomes_project 4 147171145 147171929 + Gm13063 lincRNA lincRNA MGP_NODShiLtJ_T0066468.1 MGP_NODShiLtJ_G0028358.1 mouse_genomes_project 4 121775403 121851796 - MGP_NODShiLtJ_P0066468 Zyg11b protein_coding protein_coding MGP_NODShiLtJ_T0066469.1 MGP_NODShiLtJ_G0028358.1 mouse_genomes_project 4 121787128 121787747 - Zyg11b protein_coding processed_transcript MGP_NODShiLtJ_T0065663.1 MGP_NODShiLtJ_G0028179.1 mouse_genomes_project 4 70093330 70117396 + MGP_NODShiLtJ_P0065663 Tmem268 protein_coding protein_coding MGP_NODShiLtJ_T0065664.1 MGP_NODShiLtJ_G0028179.1 mouse_genomes_project 4 70093405 70097041 + Tmem268 protein_coding processed_transcript MGP_NODShiLtJ_T0065665.1 MGP_NODShiLtJ_G0028179.1 mouse_genomes_project 4 70094776 70104567 + MGP_NODShiLtJ_P0065665 Tmem268 protein_coding protein_coding MGP_NODShiLtJ_T0065666.1 MGP_NODShiLtJ_G0028179.1 mouse_genomes_project 4 70094776 70104598 + MGP_NODShiLtJ_P0065666 Tmem268 protein_coding protein_coding MGP_NODShiLtJ_T0065667.1 MGP_NODShiLtJ_G0028179.1 mouse_genomes_project 4 70094909 70117392 + MGP_NODShiLtJ_P0065667 Tmem268 protein_coding protein_coding MGP_NODShiLtJ_T0014473.1 MGP_NODShiLtJ_G0012581.1 mouse_genomes_project 4 80564308 80564641 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004548.1 MGP_NODShiLtJ_G0003943.1 mouse_genomes_project 4 171682989 171688993 - antisense antisense MGP_NODShiLtJ_T0067691.1 MGP_NODShiLtJ_G0028636.1 mouse_genomes_project 4 144692323 144698231 - MGP_NODShiLtJ_P0067691 Dcdc2b protein_coding protein_coding MGP_NODShiLtJ_T0067692.1 MGP_NODShiLtJ_G0028636.1 mouse_genomes_project 4 144692521 144693241 - Dcdc2b protein_coding retained_intron MGP_NODShiLtJ_T0067693.1 MGP_NODShiLtJ_G0028636.1 mouse_genomes_project 4 144692740 144698228 - MGP_NODShiLtJ_P0067693 Dcdc2b protein_coding protein_coding MGP_NODShiLtJ_T0067575.1 MGP_NODShiLtJ_G0028615.1 mouse_genomes_project 4 144095810 144123670 + MGP_NODShiLtJ_P0067575 Rnf19b protein_coding protein_coding MGP_NODShiLtJ_T0067576.1 MGP_NODShiLtJ_G0028615.1 mouse_genomes_project 4 144095810 144124879 + MGP_NODShiLtJ_P0067576 Rnf19b protein_coding protein_coding MGP_NODShiLtJ_T0067577.1 MGP_NODShiLtJ_G0028615.1 mouse_genomes_project 4 144095948 144119697 + MGP_NODShiLtJ_P0067577 Rnf19b protein_coding protein_coding MGP_NODShiLtJ_T0067578.1 MGP_NODShiLtJ_G0028615.1 mouse_genomes_project 4 144096353 144123670 + MGP_NODShiLtJ_P0067578 Rnf19b protein_coding protein_coding MGP_NODShiLtJ_T0067579.1 MGP_NODShiLtJ_G0028615.1 mouse_genomes_project 4 144118118 144125030 + MGP_NODShiLtJ_P0067579 Rnf19b protein_coding protein_coding MGP_NODShiLtJ_T0067580.1 MGP_NODShiLtJ_G0028615.1 mouse_genomes_project 4 144123028 144125030 + Rnf19b protein_coding processed_transcript MGP_NODShiLtJ_T0067670.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684839 144691552 + MGP_NODShiLtJ_P0067670 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067671.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684839 144692110 + MGP_NODShiLtJ_P0067671 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067672.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684840 144703378 + MGP_NODShiLtJ_P0067672 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067673.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684851 144692521 + MGP_NODShiLtJ_P0067673 Tmem234 protein_coding protein_coding MGP_NODShiLtJ_T0067674.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684852 144691541 + MGP_NODShiLtJ_P0067674 Tmem234 protein_coding protein_coding MGP_NODShiLtJ_T0067675.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684858 144691731 + MGP_NODShiLtJ_P0067675 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067676.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684862 144691810 + MGP_NODShiLtJ_P0067676 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067677.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684862 144707646 + MGP_NODShiLtJ_P0067677 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067678.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684862 144691576 + MGP_NODShiLtJ_P0067678 Tmem234 protein_coding protein_coding MGP_NODShiLtJ_T0067679.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684866 144691819 + MGP_NODShiLtJ_P0067679 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067680.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684871 144692514 + MGP_NODShiLtJ_P0067680 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067681.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684872 144691156 + MGP_NODShiLtJ_P0067681 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067682.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684873 144691859 + Tmem234 protein_coding retained_intron MGP_NODShiLtJ_T0067683.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684874 144691173 + MGP_NODShiLtJ_P0067683 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067684.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684875 144686871 + Tmem234 protein_coding processed_transcript MGP_NODShiLtJ_T0067685.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144684878 144685621 + MGP_NODShiLtJ_P0067685 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067686.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144685154 144691687 + MGP_NODShiLtJ_P0067686 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067687.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144685154 144686102 + MGP_NODShiLtJ_P0067687 Tmem234 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067688.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144685259 144685922 + Tmem234 protein_coding retained_intron MGP_NODShiLtJ_T0067689.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144685363 144686389 + Tmem234 protein_coding retained_intron MGP_NODShiLtJ_T0067690.1 MGP_NODShiLtJ_G0028635.1 mouse_genomes_project 4 144686182 144691324 + Tmem234 protein_coding retained_intron MGP_NODShiLtJ_T0067768.1 MGP_NODShiLtJ_G0028648.1 mouse_genomes_project 4 145258041 145266985 - MGP_NODShiLtJ_P0067768 Hcrtr1 protein_coding protein_coding MGP_NODShiLtJ_T0067769.1 MGP_NODShiLtJ_G0028648.1 mouse_genomes_project 4 145258041 145266374 - MGP_NODShiLtJ_P0067769 Hcrtr1 protein_coding protein_coding MGP_NODShiLtJ_T0067770.1 MGP_NODShiLtJ_G0028648.1 mouse_genomes_project 4 145258041 145267182 - MGP_NODShiLtJ_P0067770 Hcrtr1 protein_coding protein_coding MGP_NODShiLtJ_T0067771.1 MGP_NODShiLtJ_G0028648.1 mouse_genomes_project 4 145258665 145265455 - MGP_NODShiLtJ_P0067771 Hcrtr1 protein_coding protein_coding MGP_NODShiLtJ_T0066536.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122703160 122766280 - MGP_NODShiLtJ_P0066536 Osbpl9 protein_coding protein_coding MGP_NODShiLtJ_T0066537.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122703629 122859644 - MGP_NODShiLtJ_P0066537 Osbpl9 protein_coding protein_coding MGP_NODShiLtJ_T0066538.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122703664 122766294 - MGP_NODShiLtJ_P0066538 Osbpl9 protein_coding protein_coding MGP_NODShiLtJ_T0066539.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122703669 122859627 - MGP_NODShiLtJ_P0066539 Osbpl9 protein_coding protein_coding MGP_NODShiLtJ_T0066540.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122703669 122859682 - MGP_NODShiLtJ_P0066540 Osbpl9 protein_coding protein_coding MGP_NODShiLtJ_T0066541.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122703669 122859644 - MGP_NODShiLtJ_P0066541 Osbpl9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066542.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122703673 122765097 - MGP_NODShiLtJ_P0066542 Osbpl9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0066543.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122703988 122730585 - Osbpl9 protein_coding processed_transcript MGP_NODShiLtJ_T0066544.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122704093 122859682 - MGP_NODShiLtJ_P0066544 Osbpl9 protein_coding protein_coding MGP_NODShiLtJ_T0066545.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122704101 122808865 - MGP_NODShiLtJ_P0066545 Osbpl9 protein_coding protein_coding MGP_NODShiLtJ_T0066546.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122706443 122707996 - Osbpl9 protein_coding processed_transcript MGP_NODShiLtJ_T0066547.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122710015 122714161 - Osbpl9 protein_coding processed_transcript MGP_NODShiLtJ_T0066548.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122710369 122764874 - Osbpl9 protein_coding processed_transcript MGP_NODShiLtJ_T0066549.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122726224 122756945 - Osbpl9 protein_coding processed_transcript MGP_NODShiLtJ_T0066550.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122726348 122809051 - Osbpl9 protein_coding retained_intron MGP_NODShiLtJ_T0066551.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122729537 122731915 - Osbpl9 protein_coding retained_intron MGP_NODShiLtJ_T0066552.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122730545 122755211 - Osbpl9 protein_coding processed_transcript MGP_NODShiLtJ_T0066553.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122730582 122809380 - Osbpl9 protein_coding processed_transcript MGP_NODShiLtJ_T0066554.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122784326 122859646 - Osbpl9 protein_coding processed_transcript MGP_NODShiLtJ_T0066555.1 MGP_NODShiLtJ_G0028374.1 mouse_genomes_project 4 122826785 122859644 - Osbpl9 protein_coding retained_intron MGP_NODShiLtJ_T0066851.1 MGP_NODShiLtJ_G0028440.1 mouse_genomes_project 4 130495083 130587378 + MGP_NODShiLtJ_P0066851 Tesk2 protein_coding protein_coding MGP_NODShiLtJ_T0066852.1 MGP_NODShiLtJ_G0028440.1 mouse_genomes_project 4 130495104 130589092 + MGP_NODShiLtJ_P0066852 Tesk2 protein_coding protein_coding MGP_NODShiLtJ_T0066853.1 MGP_NODShiLtJ_G0028440.1 mouse_genomes_project 4 130518051 130587238 + MGP_NODShiLtJ_P0066853 Tesk2 protein_coding protein_coding MGP_NODShiLtJ_T0066854.1 MGP_NODShiLtJ_G0028440.1 mouse_genomes_project 4 130549937 130585398 + Tesk2 protein_coding processed_transcript MGP_NODShiLtJ_T0067528.1 MGP_NODShiLtJ_G0028604.1 mouse_genomes_project 4 142889339 142933609 - MGP_NODShiLtJ_P0067528 CK137956 protein_coding protein_coding MGP_NODShiLtJ_T0066584.1 MGP_NODShiLtJ_G0028380.1 mouse_genomes_project 4 123344109 123348252 - MGP_NODShiLtJ_P0066584 Cdkn2c protein_coding protein_coding MGP_NODShiLtJ_T0066585.1 MGP_NODShiLtJ_G0028380.1 mouse_genomes_project 4 123344109 123350069 - MGP_NODShiLtJ_P0066585 Cdkn2c protein_coding protein_coding MGP_NODShiLtJ_T0011465.1 MGP_NODShiLtJ_G0009598.1 mouse_genomes_project 4 111067474 111067588 + Gm24203 misc_RNA misc_RNA MGP_NODShiLtJ_T0068560.1 MGP_NODShiLtJ_G0028829.1 mouse_genomes_project 4 156130780 156363811 - MGP_NODShiLtJ_P0068560 Igsf21 protein_coding protein_coding MGP_NODShiLtJ_T0098386.1 MGP_NODShiLtJ_G0036791.1 mouse_genomes_project 4 158364928 158370619 - Gm13053 sense_intronic sense_intronic MGP_NODShiLtJ_T0068727.1 MGP_NODShiLtJ_G0028868.1 mouse_genomes_project 4 158352637 158408204 - MGP_NODShiLtJ_P0068727 Tmem51 protein_coding protein_coding MGP_NODShiLtJ_T0064770.1 MGP_NODShiLtJ_G0027970.1 mouse_genomes_project 4 45210602 45271583 + MGP_NODShiLtJ_P0064770 Ube2r2 protein_coding protein_coding MGP_NODShiLtJ_T0064771.1 MGP_NODShiLtJ_G0027970.1 mouse_genomes_project 4 45261180 45269026 + Ube2r2 protein_coding retained_intron MGP_NODShiLtJ_T0064772.1 MGP_NODShiLtJ_G0027970.1 mouse_genomes_project 4 45267110 45269239 + Ube2r2 protein_coding retained_intron MGP_NODShiLtJ_T0004501.1 MGP_NODShiLtJ_G0003908.1 mouse_genomes_project 4 153730350 153731907 - Gm13012 antisense antisense MGP_NODShiLtJ_T0004502.1 MGP_NODShiLtJ_G0003908.1 mouse_genomes_project 4 153730350 153731393 - Gm13012 antisense antisense MGP_NODShiLtJ_T0004503.1 MGP_NODShiLtJ_G0003908.1 mouse_genomes_project 4 153730350 153731918 - Gm13012 antisense antisense MGP_NODShiLtJ_T0011463.1 MGP_NODShiLtJ_G0009596.1 mouse_genomes_project 4 100637585 100637734 + Gm27580 misc_RNA misc_RNA MGP_NODShiLtJ_T0007939.1 MGP_NODShiLtJ_G0006472.1 mouse_genomes_project 4 155397352 155401183 - 2700016F22Rik lincRNA lincRNA MGP_NODShiLtJ_T0099270.1 MGP_NODShiLtJ_G0037664.1 mouse_genomes_project 4 75458518 75458689 + Gm23738 snRNA snRNA MGP_NODShiLtJ_T0066277.1 MGP_NODShiLtJ_G0028330.1 mouse_genomes_project 4 120071871 120074342 + MGP_NODShiLtJ_P0066277 Pars2 protein_coding protein_coding MGP_NODShiLtJ_T0066278.1 MGP_NODShiLtJ_G0028330.1 mouse_genomes_project 4 120071900 120076083 + MGP_NODShiLtJ_P0066278 Pars2 protein_coding protein_coding MGP_NODShiLtJ_T0066279.1 MGP_NODShiLtJ_G0028330.1 mouse_genomes_project 4 120071905 120073669 + Pars2 protein_coding processed_transcript MGP_NODShiLtJ_T0066280.1 MGP_NODShiLtJ_G0028330.1 mouse_genomes_project 4 120071908 120076085 + MGP_NODShiLtJ_P0066280 Pars2 protein_coding protein_coding MGP_NODShiLtJ_T0010471.1 MGP_NODShiLtJ_G0008604.1 mouse_genomes_project 4 8591911 8591997 + Mir684-2 miRNA miRNA MGP_NODShiLtJ_T0014639.1 MGP_NODShiLtJ_G0012747.1 mouse_genomes_project 4 138518197 138518519 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014395.1 MGP_NODShiLtJ_G0012503.1 mouse_genomes_project 4 45246643 45247602 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014286.1 MGP_NODShiLtJ_G0012394.1 mouse_genomes_project 4 8906541 8906956 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065673.1 MGP_NODShiLtJ_G0028183.1 mouse_genomes_project 4 70376198 70406602 - MGP_NODShiLtJ_P0065673 Tnfsf8 protein_coding protein_coding MGP_NODShiLtJ_T0014393.1 MGP_NODShiLtJ_G0012501.1 mouse_genomes_project 4 44808768 44809065 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100524.1 MGP_NODShiLtJ_G0038918.1 mouse_genomes_project 4 36456959 36457046 + Gm22010 snoRNA snoRNA MGP_NODShiLtJ_T0007781.1 MGP_NODShiLtJ_G0006355.1 mouse_genomes_project 4 59814843 59815341 - lincRNA lincRNA MGP_NODShiLtJ_T0014461.1 MGP_NODShiLtJ_G0012569.1 mouse_genomes_project 4 74113190 74113559 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017876.1 MGP_NODShiLtJ_G0015400.1 mouse_genomes_project 4 7036675 7090282 + 4930412C18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017877.1 MGP_NODShiLtJ_G0015400.1 mouse_genomes_project 4 7036675 7091743 + 4930412C18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017878.1 MGP_NODShiLtJ_G0015400.1 mouse_genomes_project 4 7036741 7043116 + 4930412C18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017879.1 MGP_NODShiLtJ_G0015400.1 mouse_genomes_project 4 7036769 7047177 + 4930412C18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017880.1 MGP_NODShiLtJ_G0015400.1 mouse_genomes_project 4 7036887 7088617 + 4930412C18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0065403.1 MGP_NODShiLtJ_G0028108.1 mouse_genomes_project 4 59332017 59392886 + MGP_NODShiLtJ_P0065403 Fktn protein_coding protein_coding MGP_NODShiLtJ_T0065404.1 MGP_NODShiLtJ_G0028108.1 mouse_genomes_project 4 59332182 59389888 + MGP_NODShiLtJ_P0065404 Fktn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065405.1 MGP_NODShiLtJ_G0028108.1 mouse_genomes_project 4 59338024 59390372 + MGP_NODShiLtJ_P0065405 Fktn protein_coding protein_coding MGP_NODShiLtJ_T0066470.1 MGP_NODShiLtJ_G0028359.1 mouse_genomes_project 4 121884271 121898744 + MGP_NODShiLtJ_P0066470 Coa7 protein_coding protein_coding MGP_NODShiLtJ_T0066471.1 MGP_NODShiLtJ_G0028359.1 mouse_genomes_project 4 121884284 121895651 + Coa7 protein_coding processed_transcript MGP_NODShiLtJ_T0066472.1 MGP_NODShiLtJ_G0028359.1 mouse_genomes_project 4 121884287 121895883 + Coa7 protein_coding processed_transcript MGP_NODShiLtJ_T0066473.1 MGP_NODShiLtJ_G0028359.1 mouse_genomes_project 4 121884309 121895378 + Coa7 protein_coding processed_transcript MGP_NODShiLtJ_T0066474.1 MGP_NODShiLtJ_G0028359.1 mouse_genomes_project 4 121884320 121888795 + Coa7 protein_coding processed_transcript MGP_NODShiLtJ_T0017969.1 MGP_NODShiLtJ_G0015454.1 mouse_genomes_project 4 173943345 173950470 - Gm13648 processed_transcript processed_transcript MGP_NODShiLtJ_T0004497.1 MGP_NODShiLtJ_G0003904.1 mouse_genomes_project 4 151626729 151633896 + Gm13008 antisense antisense MGP_NODShiLtJ_T0066689.1 MGP_NODShiLtJ_G0028406.1 mouse_genomes_project 4 129061179 129068570 + MGP_NODShiLtJ_P0066689 Cyp4a30b protein_coding protein_coding MGP_NODShiLtJ_T0065644.1 MGP_NODShiLtJ_G0028176.1 mouse_genomes_project 4 69883666 69921874 - MGP_NODShiLtJ_P0065644 Akna protein_coding protein_coding MGP_NODShiLtJ_T0065645.1 MGP_NODShiLtJ_G0028176.1 mouse_genomes_project 4 69896449 69897729 - Akna protein_coding processed_transcript MGP_NODShiLtJ_T0007797.1 MGP_NODShiLtJ_G0006368.1 mouse_genomes_project 4 65359178 65362250 + Gm12596 lincRNA lincRNA MGP_NODShiLtJ_T0067400.1 MGP_NODShiLtJ_G0028575.1 mouse_genomes_project 4 140882742 140919758 + MGP_NODShiLtJ_P0067400 Stk40 protein_coding protein_coding MGP_NODShiLtJ_T0067401.1 MGP_NODShiLtJ_G0028575.1 mouse_genomes_project 4 140882757 140919759 + MGP_NODShiLtJ_P0067401 Stk40 protein_coding protein_coding MGP_NODShiLtJ_T0067402.1 MGP_NODShiLtJ_G0028575.1 mouse_genomes_project 4 140882786 140903871 + MGP_NODShiLtJ_P0067402 Stk40 protein_coding protein_coding MGP_NODShiLtJ_T0067403.1 MGP_NODShiLtJ_G0028575.1 mouse_genomes_project 4 140882820 140896479 + Stk40 protein_coding processed_transcript MGP_NODShiLtJ_T0067404.1 MGP_NODShiLtJ_G0028575.1 mouse_genomes_project 4 140897052 140907700 + MGP_NODShiLtJ_P0067404 Stk40 protein_coding protein_coding MGP_NODShiLtJ_T0067405.1 MGP_NODShiLtJ_G0028575.1 mouse_genomes_project 4 140907550 140911530 + Stk40 protein_coding processed_transcript MGP_NODShiLtJ_T0068267.1 MGP_NODShiLtJ_G0028757.1 mouse_genomes_project 4 151539207 151558700 + MGP_NODShiLtJ_P0068267 Fuca1 protein_coding protein_coding MGP_NODShiLtJ_T0068268.1 MGP_NODShiLtJ_G0028757.1 mouse_genomes_project 4 151548314 151553183 + Fuca1 protein_coding processed_transcript MGP_NODShiLtJ_T0068269.1 MGP_NODShiLtJ_G0028757.1 mouse_genomes_project 4 151551407 151557752 + Fuca1 protein_coding processed_transcript MGP_NODShiLtJ_T0068270.1 MGP_NODShiLtJ_G0028757.1 mouse_genomes_project 4 151551534 151553752 + Fuca1 protein_coding processed_transcript MGP_NODShiLtJ_T0068271.1 MGP_NODShiLtJ_G0028757.1 mouse_genomes_project 4 151555106 151557752 + Fuca1 protein_coding processed_transcript MGP_NODShiLtJ_T0101919.1 MGP_NODShiLtJ_G0040087.1 mouse_genomes_project 4 108933892 108958053 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0067237.1 MGP_NODShiLtJ_G0028533.1 mouse_genomes_project 4 137253228 137275988 + MGP_NODShiLtJ_P0067237 Ppt1 protein_coding protein_coding MGP_NODShiLtJ_T0067238.1 MGP_NODShiLtJ_G0028533.1 mouse_genomes_project 4 137253232 137265843 + MGP_NODShiLtJ_P0067238 Ppt1 protein_coding protein_coding MGP_NODShiLtJ_T0067239.1 MGP_NODShiLtJ_G0028533.1 mouse_genomes_project 4 137253236 137276085 + MGP_NODShiLtJ_P0067239 Ppt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067240.1 MGP_NODShiLtJ_G0028533.1 mouse_genomes_project 4 137253240 137267170 + MGP_NODShiLtJ_P0067240 Ppt1 protein_coding protein_coding MGP_NODShiLtJ_T0099258.1 MGP_NODShiLtJ_G0037652.1 mouse_genomes_project 4 45402125 45402233 - Gm26049 snRNA snRNA MGP_NODShiLtJ_T0067064.1 MGP_NODShiLtJ_G0028482.1 mouse_genomes_project 4 132607534 132608509 - MGP_NODShiLtJ_P0067064 Olfr1342 protein_coding protein_coding MGP_NODShiLtJ_T0066268.1 MGP_NODShiLtJ_G0028325.1 mouse_genomes_project 4 119850074 119873611 - MGP_NODShiLtJ_P0066268 Pcsk9 protein_coding protein_coding MGP_NODShiLtJ_T0067081.1 MGP_NODShiLtJ_G0028494.1 mouse_genomes_project 4 133169656 133173957 - MGP_NODShiLtJ_P0067081 Zfp691 protein_coding protein_coding MGP_NODShiLtJ_T0067082.1 MGP_NODShiLtJ_G0028494.1 mouse_genomes_project 4 133169656 133174296 - MGP_NODShiLtJ_P0067082 Zfp691 protein_coding protein_coding MGP_NODShiLtJ_T0067083.1 MGP_NODShiLtJ_G0028494.1 mouse_genomes_project 4 133169659 133173957 - MGP_NODShiLtJ_P0067083 Zfp691 protein_coding protein_coding MGP_NODShiLtJ_T0067084.1 MGP_NODShiLtJ_G0028494.1 mouse_genomes_project 4 133171111 133173957 - MGP_NODShiLtJ_P0067084 Zfp691 protein_coding protein_coding MGP_NODShiLtJ_T0068457.1 MGP_NODShiLtJ_G0028798.1 mouse_genomes_project 4 154225619 154240081 - MGP_NODShiLtJ_P0068457 Pink1 protein_coding protein_coding MGP_NODShiLtJ_T0068458.1 MGP_NODShiLtJ_G0028798.1 mouse_genomes_project 4 154226575 154240102 - MGP_NODShiLtJ_P0068458 Pink1 protein_coding protein_coding MGP_NODShiLtJ_T0065622.1 MGP_NODShiLtJ_G0028169.1 mouse_genomes_project 4 69611147 69622025 - MGP_NODShiLtJ_P0065622 Ambp protein_coding protein_coding MGP_NODShiLtJ_T0065623.1 MGP_NODShiLtJ_G0028169.1 mouse_genomes_project 4 69620569 69622651 - MGP_NODShiLtJ_P0065623 Ambp protein_coding protein_coding MGP_NODShiLtJ_T0065000.1 MGP_NODShiLtJ_G0028014.1 mouse_genomes_project 4 47760154 47767894 + MGP_NODShiLtJ_P0065000 Car9 protein_coding protein_coding MGP_NODShiLtJ_T0065001.1 MGP_NODShiLtJ_G0028014.1 mouse_genomes_project 4 47760173 47767873 + Car9 protein_coding processed_transcript MGP_NODShiLtJ_T0065002.1 MGP_NODShiLtJ_G0028014.1 mouse_genomes_project 4 47760461 47767202 + MGP_NODShiLtJ_P0065002 Car9 protein_coding protein_coding MGP_NODShiLtJ_T0065003.1 MGP_NODShiLtJ_G0028014.1 mouse_genomes_project 4 47761060 47762158 + Car9 protein_coding processed_transcript MGP_NODShiLtJ_T0065004.1 MGP_NODShiLtJ_G0028014.1 mouse_genomes_project 4 47761726 47762219 + Car9 protein_coding processed_transcript MGP_NODShiLtJ_T0065005.1 MGP_NODShiLtJ_G0028014.1 mouse_genomes_project 4 47762120 47766599 + Car9 protein_coding processed_transcript MGP_NODShiLtJ_T0065006.1 MGP_NODShiLtJ_G0028014.1 mouse_genomes_project 4 47766275 47767086 + Car9 protein_coding processed_transcript MGP_NODShiLtJ_T0098383.1 MGP_NODShiLtJ_G0036788.1 mouse_genomes_project 4 122090303 122093783 + Gm12737 sense_intronic sense_intronic MGP_NODShiLtJ_T0066911.1 MGP_NODShiLtJ_G0028452.1 mouse_genomes_project 4 130977501 130979917 - MGP_NODShiLtJ_P0066911 Rps8 protein_coding protein_coding MGP_NODShiLtJ_T0066912.1 MGP_NODShiLtJ_G0028452.1 mouse_genomes_project 4 130977508 130978171 - Rps8 protein_coding retained_intron MGP_NODShiLtJ_T0066913.1 MGP_NODShiLtJ_G0028452.1 mouse_genomes_project 4 130978046 130978855 - Rps8 protein_coding retained_intron MGP_NODShiLtJ_T0066914.1 MGP_NODShiLtJ_G0028452.1 mouse_genomes_project 4 130978065 130979758 - Rps8 protein_coding retained_intron MGP_NODShiLtJ_T0066915.1 MGP_NODShiLtJ_G0028452.1 mouse_genomes_project 4 130978183 130979743 - Rps8 protein_coding retained_intron MGP_NODShiLtJ_T0066916.1 MGP_NODShiLtJ_G0028452.1 mouse_genomes_project 4 130978359 130979746 - Rps8 protein_coding retained_intron MGP_NODShiLtJ_T0068590.1 MGP_NODShiLtJ_G0028837.1 mouse_genomes_project 4 157153758 157176901 + MGP_NODShiLtJ_P0068590 Sdhb protein_coding protein_coding MGP_NODShiLtJ_T0068591.1 MGP_NODShiLtJ_G0028837.1 mouse_genomes_project 4 157153956 157170265 + Sdhb protein_coding processed_transcript MGP_NODShiLtJ_T0068592.1 MGP_NODShiLtJ_G0028837.1 mouse_genomes_project 4 157153958 157167760 + Sdhb protein_coding processed_transcript MGP_NODShiLtJ_T0014580.1 MGP_NODShiLtJ_G0012688.1 mouse_genomes_project 4 122023362 122023898 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014588.1 MGP_NODShiLtJ_G0012696.1 mouse_genomes_project 4 125351614 125352613 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099309.1 MGP_NODShiLtJ_G0037703.1 mouse_genomes_project 4 147419868 147420002 - Rnu11 snRNA snRNA MGP_NODShiLtJ_T0067633.1 MGP_NODShiLtJ_G0028626.1 mouse_genomes_project 4 144500920 144516288 - MGP_NODShiLtJ_P0067633 Zbtb8b protein_coding protein_coding MGP_NODShiLtJ_T0067634.1 MGP_NODShiLtJ_G0028626.1 mouse_genomes_project 4 144500920 144516253 - MGP_NODShiLtJ_P0067634 Zbtb8b protein_coding protein_coding MGP_NODShiLtJ_T0067635.1 MGP_NODShiLtJ_G0028626.1 mouse_genomes_project 4 144501425 144507672 - Zbtb8b protein_coding processed_transcript MGP_NODShiLtJ_T0067636.1 MGP_NODShiLtJ_G0028626.1 mouse_genomes_project 4 144504290 144516255 - Zbtb8b protein_coding retained_intron MGP_NODShiLtJ_T0007890.1 MGP_NODShiLtJ_G0006439.1 mouse_genomes_project 4 142458105 142459369 + 1700080G11Rik lincRNA lincRNA MGP_NODShiLtJ_T0065415.1 MGP_NODShiLtJ_G0028112.1 mouse_genomes_project 4 61113906 61161308 + MGP_NODShiLtJ_P0065415 Rad23b protein_coding protein_coding MGP_NODShiLtJ_T0065416.1 MGP_NODShiLtJ_G0028112.1 mouse_genomes_project 4 61113913 61134227 + Rad23b protein_coding processed_transcript MGP_NODShiLtJ_T0065417.1 MGP_NODShiLtJ_G0028112.1 mouse_genomes_project 4 61113915 61115048 + Rad23b protein_coding processed_transcript MGP_NODShiLtJ_T0065418.1 MGP_NODShiLtJ_G0028112.1 mouse_genomes_project 4 61113953 61146947 + Rad23b protein_coding processed_transcript MGP_NODShiLtJ_T0067344.1 MGP_NODShiLtJ_G0028559.1 mouse_genomes_project 4 139524914 139526165 - protein_coding retained_intron MGP_NODShiLtJ_T0067345.1 MGP_NODShiLtJ_G0028559.1 mouse_genomes_project 4 139525319 139528623 - MGP_NODShiLtJ_P0067345 protein_coding protein_coding MGP_NODShiLtJ_T0067346.1 MGP_NODShiLtJ_G0028559.1 mouse_genomes_project 4 139525319 139528544 - MGP_NODShiLtJ_P0067346 protein_coding protein_coding MGP_NODShiLtJ_T0067347.1 MGP_NODShiLtJ_G0028559.1 mouse_genomes_project 4 139525320 139526493 - MGP_NODShiLtJ_P0067347 protein_coding protein_coding MGP_NODShiLtJ_T0067348.1 MGP_NODShiLtJ_G0028559.1 mouse_genomes_project 4 139525324 139529021 - MGP_NODShiLtJ_P0067348 protein_coding protein_coding MGP_NODShiLtJ_T0067349.1 MGP_NODShiLtJ_G0028559.1 mouse_genomes_project 4 139525380 139526305 - MGP_NODShiLtJ_P0067349 protein_coding protein_coding MGP_NODShiLtJ_T0014498.1 MGP_NODShiLtJ_G0012606.1 mouse_genomes_project 4 90145404 90146503 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101914.1 MGP_NODShiLtJ_G0040082.1 mouse_genomes_project 4 99788060 99788568 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010527.1 MGP_NODShiLtJ_G0008660.1 mouse_genomes_project 4 148480736 148480798 + Mir7017 miRNA miRNA MGP_NODShiLtJ_T0097811.1 MGP_NODShiLtJ_G0036223.1 mouse_genomes_project 4 157812636 157814340 + pseudogene pseudogene MGP_NODShiLtJ_T0014403.1 MGP_NODShiLtJ_G0012511.1 mouse_genomes_project 4 50235507 50235835 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014425.1 MGP_NODShiLtJ_G0012533.1 mouse_genomes_project 4 57935023 57935281 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014331.1 MGP_NODShiLtJ_G0012439.1 mouse_genomes_project 4 24317503 24318706 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010530.1 MGP_NODShiLtJ_G0008663.1 mouse_genomes_project 4 149059832 149059891 - Mir7227 miRNA miRNA MGP_NODShiLtJ_T0068102.1 MGP_NODShiLtJ_G0028716.1 mouse_genomes_project 4 149582850 149584234 - MGP_NODShiLtJ_P0068102 Sh3bgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0068103.1 MGP_NODShiLtJ_G0028716.1 mouse_genomes_project 4 149582857 149584184 - MGP_NODShiLtJ_P0068103 Sh3bgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0068104.1 MGP_NODShiLtJ_G0028716.1 mouse_genomes_project 4 149583284 149584182 - Sh3bgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0068209.1 MGP_NODShiLtJ_G0028744.1 mouse_genomes_project 4 150770669 150833728 - MGP_NODShiLtJ_P0068209 Clic4 protein_coding protein_coding MGP_NODShiLtJ_T0068210.1 MGP_NODShiLtJ_G0028744.1 mouse_genomes_project 4 150779884 150833728 - Clic4 protein_coding retained_intron MGP_NODShiLtJ_T0014685.1 MGP_NODShiLtJ_G0012793.1 mouse_genomes_project 4 154357091 154357296 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017911.1 MGP_NODShiLtJ_G0015420.1 mouse_genomes_project 4 100272463 100300218 - Gm12602 processed_transcript processed_transcript MGP_NODShiLtJ_T0017912.1 MGP_NODShiLtJ_G0015420.1 mouse_genomes_project 4 100295905 100300173 - Gm12602 processed_transcript processed_transcript MGP_NODShiLtJ_T0066582.1 MGP_NODShiLtJ_G0028379.1 mouse_genomes_project 4 123175698 123203863 - MGP_NODShiLtJ_P0066582 4930522H14Rik protein_coding protein_coding MGP_NODShiLtJ_T0066583.1 MGP_NODShiLtJ_G0028379.1 mouse_genomes_project 4 123175726 123203770 - MGP_NODShiLtJ_P0066583 4930522H14Rik protein_coding protein_coding MGP_NODShiLtJ_T0014285.1 MGP_NODShiLtJ_G0012393.1 mouse_genomes_project 4 8885915 8886893 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064811.1 MGP_NODShiLtJ_G0027979.1 mouse_genomes_project 4 45678853 45750491 + MGP_NODShiLtJ_P0064811 Dnaic1 protein_coding protein_coding MGP_NODShiLtJ_T0064812.1 MGP_NODShiLtJ_G0027979.1 mouse_genomes_project 4 45743976 45750491 + Dnaic1 protein_coding retained_intron MGP_NODShiLtJ_T0064813.1 MGP_NODShiLtJ_G0027979.1 mouse_genomes_project 4 45745680 45750491 + MGP_NODShiLtJ_P0064813 Dnaic1 protein_coding protein_coding MGP_NODShiLtJ_T0067913.1 MGP_NODShiLtJ_G0028676.1 mouse_genomes_project 4 147684205 147703303 - MGP_NODShiLtJ_P0067913 Sesn2 protein_coding protein_coding MGP_NODShiLtJ_T0004365.1 MGP_NODShiLtJ_G0003801.1 mouse_genomes_project 4 6679492 6694041 - Gm11817 antisense antisense MGP_NODShiLtJ_T0066271.1 MGP_NODShiLtJ_G0028328.1 mouse_genomes_project 4 120009421 120037506 - MGP_NODShiLtJ_P0066271 Lexm protein_coding protein_coding MGP_NODShiLtJ_T0066272.1 MGP_NODShiLtJ_G0028328.1 mouse_genomes_project 4 120009421 120037509 - MGP_NODShiLtJ_P0066272 Lexm protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066273.1 MGP_NODShiLtJ_G0028328.1 mouse_genomes_project 4 120009421 120026664 - MGP_NODShiLtJ_P0066273 Lexm protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066274.1 MGP_NODShiLtJ_G0028328.1 mouse_genomes_project 4 120009822 120037506 - MGP_NODShiLtJ_P0066274 Lexm protein_coding protein_coding MGP_NODShiLtJ_T0004453.1 MGP_NODShiLtJ_G0003868.1 mouse_genomes_project 4 130288559 130289387 + Gm12953 antisense antisense MGP_NODShiLtJ_T0100558.1 MGP_NODShiLtJ_G0038952.1 mouse_genomes_project 4 91771951 91772082 - Gm25803 snoRNA snoRNA MGP_NODShiLtJ_T0065350.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54471998 54478695 + MGP_NODShiLtJ_P0065350 Rnf20 protein_coding protein_coding MGP_NODShiLtJ_T0065351.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54472052 54496754 + MGP_NODShiLtJ_P0065351 Rnf20 protein_coding protein_coding MGP_NODShiLtJ_T0065352.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54472052 54490126 + MGP_NODShiLtJ_P0065352 Rnf20 protein_coding protein_coding MGP_NODShiLtJ_T0065353.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54472058 54496755 + MGP_NODShiLtJ_P0065353 Rnf20 protein_coding protein_coding MGP_NODShiLtJ_T0065354.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54472085 54484416 + MGP_NODShiLtJ_P0065354 Rnf20 protein_coding protein_coding MGP_NODShiLtJ_T0065355.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54472129 54480006 + Rnf20 protein_coding processed_transcript MGP_NODShiLtJ_T0065356.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54472151 54482856 + Rnf20 protein_coding processed_transcript MGP_NODShiLtJ_T0065357.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54481614 54488314 + Rnf20 protein_coding processed_transcript MGP_NODShiLtJ_T0065358.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54490137 54492701 + Rnf20 protein_coding processed_transcript MGP_NODShiLtJ_T0065359.1 MGP_NODShiLtJ_G0028093.1 mouse_genomes_project 4 54490842 54492425 + Rnf20 protein_coding processed_transcript MGP_NODShiLtJ_T0067165.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 133815907 133964954 + Hivep3 protein_coding processed_transcript MGP_NODShiLtJ_T0067166.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 133815907 133903807 + Hivep3 protein_coding processed_transcript MGP_NODShiLtJ_T0067167.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 133815919 133818892 + MGP_NODShiLtJ_P0067167 Hivep3 protein_coding protein_coding MGP_NODShiLtJ_T0067168.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 133815964 133963848 + Hivep3 protein_coding processed_transcript MGP_NODShiLtJ_T0067169.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 133846812 133964317 + Hivep3 protein_coding processed_transcript MGP_NODShiLtJ_T0067170.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 133903389 134093685 + Hivep3 protein_coding processed_transcript MGP_NODShiLtJ_T0067171.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 133903413 133964954 + Hivep3 protein_coding processed_transcript MGP_NODShiLtJ_T0067172.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 133903553 134240102 + MGP_NODShiLtJ_P0067172 Hivep3 protein_coding protein_coding MGP_NODShiLtJ_T0067173.1 MGP_NODShiLtJ_G0028511.1 mouse_genomes_project 4 134199871 134236635 + MGP_NODShiLtJ_P0067173 Hivep3 protein_coding protein_coding MGP_NODShiLtJ_T0014663.1 MGP_NODShiLtJ_G0012771.1 mouse_genomes_project 4 148135186 148137050 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064354.1 MGP_NODShiLtJ_G0027863.1 mouse_genomes_project 4 8653895 8656508 + Ccne2 protein_coding processed_transcript MGP_NODShiLtJ_T0064355.1 MGP_NODShiLtJ_G0027863.1 mouse_genomes_project 4 8654253 8658257 + Ccne2 protein_coding processed_transcript MGP_NODShiLtJ_T0064356.1 MGP_NODShiLtJ_G0027863.1 mouse_genomes_project 4 8654270 8667002 + MGP_NODShiLtJ_P0064356 Ccne2 protein_coding protein_coding MGP_NODShiLtJ_T0064357.1 MGP_NODShiLtJ_G0027863.1 mouse_genomes_project 4 8654280 8658139 + Ccne2 protein_coding processed_transcript MGP_NODShiLtJ_T0064358.1 MGP_NODShiLtJ_G0027863.1 mouse_genomes_project 4 8654326 8666198 + MGP_NODShiLtJ_P0064358 Ccne2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064359.1 MGP_NODShiLtJ_G0027863.1 mouse_genomes_project 4 8655143 8655782 + Ccne2 protein_coding processed_transcript MGP_NODShiLtJ_T0014497.1 MGP_NODShiLtJ_G0012605.1 mouse_genomes_project 4 89955936 89956339 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068886.1 MGP_NODShiLtJ_G0028928.1 mouse_genomes_project 4 165602679 165609029 + Mtor protein_coding retained_intron MGP_NODShiLtJ_T0068887.1 MGP_NODShiLtJ_G0028928.1 mouse_genomes_project 4 165602679 165716818 + MGP_NODShiLtJ_P0068887 Mtor protein_coding protein_coding MGP_NODShiLtJ_T0068888.1 MGP_NODShiLtJ_G0028928.1 mouse_genomes_project 4 165602693 165609033 + MGP_NODShiLtJ_P0068888 Mtor protein_coding protein_coding MGP_NODShiLtJ_T0068890.1 MGP_NODShiLtJ_G0028928.1 mouse_genomes_project 4 165703309 165706875 + Mtor protein_coding retained_intron MGP_NODShiLtJ_T0064271.1 MGP_NODShiLtJ_G0027848.1 mouse_genomes_project 4 3134407 3165934 + MGP_NODShiLtJ_P0064271 Ubxn2b protein_coding protein_coding MGP_NODShiLtJ_T0014297.1 MGP_NODShiLtJ_G0012405.1 mouse_genomes_project 4 13556278 13556733 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001402.1 MGP_NODShiLtJ_G0001321.1 mouse_genomes_project 4 173903984 173908089 - TEC TEC MGP_NODShiLtJ_T0100517.1 MGP_NODShiLtJ_G0038911.1 mouse_genomes_project 4 11929133 11929265 - Gm24068 snoRNA snoRNA MGP_NODShiLtJ_T0068577.1 MGP_NODShiLtJ_G0028832.1 mouse_genomes_project 4 156912518 156929411 - MGP_NODShiLtJ_P0068577 Padi6 protein_coding protein_coding MGP_NODShiLtJ_T0068578.1 MGP_NODShiLtJ_G0028832.1 mouse_genomes_project 4 156918456 156919176 - Padi6 protein_coding processed_transcript MGP_NODShiLtJ_T0068579.1 MGP_NODShiLtJ_G0028832.1 mouse_genomes_project 4 156922498 156928422 - MGP_NODShiLtJ_P0068579 Padi6 protein_coding protein_coding MGP_NODShiLtJ_T0066855.1 MGP_NODShiLtJ_G0028441.1 mouse_genomes_project 4 130575899 130590684 - MGP_NODShiLtJ_P0066855 Toe1 protein_coding protein_coding MGP_NODShiLtJ_T0066856.1 MGP_NODShiLtJ_G0028441.1 mouse_genomes_project 4 130587136 130590776 - MGP_NODShiLtJ_P0066856 Toe1 protein_coding protein_coding MGP_NODShiLtJ_T0066857.1 MGP_NODShiLtJ_G0028441.1 mouse_genomes_project 4 130587146 130588328 - Toe1 protein_coding processed_transcript MGP_NODShiLtJ_T0066858.1 MGP_NODShiLtJ_G0028441.1 mouse_genomes_project 4 130587809 130588741 - Toe1 protein_coding retained_intron MGP_NODShiLtJ_T0066859.1 MGP_NODShiLtJ_G0028441.1 mouse_genomes_project 4 130587917 130589659 - MGP_NODShiLtJ_P0066859 Toe1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066860.1 MGP_NODShiLtJ_G0028441.1 mouse_genomes_project 4 130588411 130589736 - Toe1 protein_coding retained_intron MGP_NODShiLtJ_T0066861.1 MGP_NODShiLtJ_G0028441.1 mouse_genomes_project 4 130588846 130590742 - Toe1 protein_coding processed_transcript MGP_NODShiLtJ_T0066862.1 MGP_NODShiLtJ_G0028441.1 mouse_genomes_project 4 130588952 130590684 - Toe1 protein_coding retained_intron MGP_NODShiLtJ_T0064732.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44745583 44747229 + Dnaja1 protein_coding processed_transcript MGP_NODShiLtJ_T0064733.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44745929 44757747 + MGP_NODShiLtJ_P0064733 Dnaja1 protein_coding protein_coding MGP_NODShiLtJ_T0064734.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44745992 44753618 + Dnaja1 protein_coding processed_transcript MGP_NODShiLtJ_T0064735.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44746355 44758641 + Dnaja1 protein_coding processed_transcript MGP_NODShiLtJ_T0064736.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44746363 44755184 + MGP_NODShiLtJ_P0064736 Dnaja1 protein_coding protein_coding MGP_NODShiLtJ_T0064737.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44746378 44751591 + MGP_NODShiLtJ_P0064737 Dnaja1 protein_coding protein_coding MGP_NODShiLtJ_T0064738.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44746550 44749614 + MGP_NODShiLtJ_P0064738 Dnaja1 protein_coding protein_coding MGP_NODShiLtJ_T0064739.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44746795 44747545 + Dnaja1 protein_coding processed_transcript MGP_NODShiLtJ_T0064740.1 MGP_NODShiLtJ_G0027960.1 mouse_genomes_project 4 44747482 44755688 + Dnaja1 protein_coding processed_transcript MGP_NODShiLtJ_T0100581.1 MGP_NODShiLtJ_G0038975.1 mouse_genomes_project 4 141708165 141708298 - Gm25604 snoRNA snoRNA MGP_NODShiLtJ_T0014478.1 MGP_NODShiLtJ_G0012586.1 mouse_genomes_project 4 82424775 82425571 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100557.1 MGP_NODShiLtJ_G0038951.1 mouse_genomes_project 4 89071189 89071312 - Gm25836 snoRNA snoRNA MGP_NODShiLtJ_T0010493.1 MGP_NODShiLtJ_G0008626.1 mouse_genomes_project 4 64436516 64436603 - Mir3095 miRNA miRNA MGP_NODShiLtJ_T0001401.1 MGP_NODShiLtJ_G0001320.1 mouse_genomes_project 4 169548367 169551228 - TEC TEC MGP_NODShiLtJ_T0066733.1 MGP_NODShiLtJ_G0028417.1 mouse_genomes_project 4 129565731 129569272 + MGP_NODShiLtJ_P0066733 Kncn protein_coding protein_coding MGP_NODShiLtJ_T0066734.1 MGP_NODShiLtJ_G0028417.1 mouse_genomes_project 4 129567198 129570834 + Kncn protein_coding processed_transcript MGP_NODShiLtJ_T0011448.1 MGP_NODShiLtJ_G0009581.1 mouse_genomes_project 4 18726074 18726364 - Gm25655 misc_RNA misc_RNA MGP_NODShiLtJ_T0004392.1 MGP_NODShiLtJ_G0003825.1 mouse_genomes_project 4 49397281 49401001 + 1700055D18Rik antisense antisense MGP_NODShiLtJ_T0004393.1 MGP_NODShiLtJ_G0003825.1 mouse_genomes_project 4 49398424 49399994 + 1700055D18Rik antisense antisense MGP_NODShiLtJ_T0004437.1 MGP_NODShiLtJ_G0003858.1 mouse_genomes_project 4 120592026 120602608 + Gm12802 antisense antisense MGP_NODShiLtJ_T0014675.1 MGP_NODShiLtJ_G0012783.1 mouse_genomes_project 4 151478295 151479159 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014405.1 MGP_NODShiLtJ_G0012513.1 mouse_genomes_project 4 50769723 50770736 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068362.1 MGP_NODShiLtJ_G0028780.1 mouse_genomes_project 4 152633815 152659719 - MGP_NODShiLtJ_P0068362 Epha8 protein_coding protein_coding MGP_NODShiLtJ_T0068045.1 MGP_NODShiLtJ_G0028708.1 mouse_genomes_project 4 149236792 149294583 - MGP_NODShiLtJ_P0068045 Rps6ka1 protein_coding protein_coding MGP_NODShiLtJ_T0068046.1 MGP_NODShiLtJ_G0028708.1 mouse_genomes_project 4 149236801 149294735 - MGP_NODShiLtJ_P0068046 Rps6ka1 protein_coding protein_coding MGP_NODShiLtJ_T0068047.1 MGP_NODShiLtJ_G0028708.1 mouse_genomes_project 4 149236801 149281435 - MGP_NODShiLtJ_P0068047 Rps6ka1 protein_coding protein_coding MGP_NODShiLtJ_T0068048.1 MGP_NODShiLtJ_G0028708.1 mouse_genomes_project 4 149237323 149279007 - MGP_NODShiLtJ_P0068048 Rps6ka1 protein_coding protein_coding MGP_NODShiLtJ_T0068049.1 MGP_NODShiLtJ_G0028708.1 mouse_genomes_project 4 149237555 149279735 - MGP_NODShiLtJ_P0068049 Rps6ka1 protein_coding protein_coding MGP_NODShiLtJ_T0068050.1 MGP_NODShiLtJ_G0028708.1 mouse_genomes_project 4 149241698 149266279 - Rps6ka1 protein_coding retained_intron MGP_NODShiLtJ_T0068051.1 MGP_NODShiLtJ_G0028708.1 mouse_genomes_project 4 149265516 149266391 - Rps6ka1 protein_coding retained_intron MGP_NODShiLtJ_T0068052.1 MGP_NODShiLtJ_G0028708.1 mouse_genomes_project 4 149278657 149294525 - Rps6ka1 protein_coding processed_transcript MGP_NODShiLtJ_T0065293.1 MGP_NODShiLtJ_G0028075.1 mouse_genomes_project 4 52077625 52084152 - Alg2 protein_coding processed_transcript MGP_NODShiLtJ_T0065294.1 MGP_NODShiLtJ_G0028075.1 mouse_genomes_project 4 52083214 52087715 - MGP_NODShiLtJ_P0065294 Alg2 protein_coding protein_coding MGP_NODShiLtJ_T0065295.1 MGP_NODShiLtJ_G0028075.1 mouse_genomes_project 4 52085275 52087359 - MGP_NODShiLtJ_P0065295 Alg2 protein_coding protein_coding MGP_NODShiLtJ_T0014531.1 MGP_NODShiLtJ_G0012639.1 mouse_genomes_project 4 105056234 105056724 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067736.1 MGP_NODShiLtJ_G0028644.1 mouse_genomes_project 4 145044227 145071765 + MGP_NODShiLtJ_P0067736 Spocd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067737.1 MGP_NODShiLtJ_G0028644.1 mouse_genomes_project 4 145062269 145068233 + MGP_NODShiLtJ_P0067737 Spocd1 protein_coding protein_coding MGP_NODShiLtJ_T0067738.1 MGP_NODShiLtJ_G0028644.1 mouse_genomes_project 4 145062443 145071758 + MGP_NODShiLtJ_P0067738 Spocd1 protein_coding protein_coding MGP_NODShiLtJ_T0098200.1 MGP_NODShiLtJ_G0036612.1 mouse_genomes_project 4 97461791 97461922 - Scarna8 scaRNA scaRNA MGP_NODShiLtJ_T0014353.1 MGP_NODShiLtJ_G0012461.1 mouse_genomes_project 4 30673125 30673304 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065013.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47787616 47814341 - MGP_NODShiLtJ_P0065013 Tln1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065014.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47787627 47820013 - MGP_NODShiLtJ_P0065014 Tln1 protein_coding protein_coding MGP_NODShiLtJ_T0065015.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47802992 47805230 - MGP_NODShiLtJ_P0065015 Tln1 protein_coding protein_coding MGP_NODShiLtJ_T0065016.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47804404 47808854 - MGP_NODShiLtJ_P0065016 Tln1 protein_coding protein_coding MGP_NODShiLtJ_T0065017.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47811042 47812042 - Tln1 protein_coding processed_transcript MGP_NODShiLtJ_T0065018.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47812104 47819748 - Tln1 protein_coding processed_transcript MGP_NODShiLtJ_T0065019.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47812696 47816048 - MGP_NODShiLtJ_P0065019 Tln1 protein_coding protein_coding MGP_NODShiLtJ_T0065020.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47813154 47813537 - Tln1 protein_coding processed_transcript MGP_NODShiLtJ_T0065021.1 MGP_NODShiLtJ_G0028016.1 mouse_genomes_project 4 47816930 47820281 - Tln1 protein_coding processed_transcript MGP_NODShiLtJ_T0007964.1 MGP_NODShiLtJ_G0006496.1 mouse_genomes_project 4 170868785 170869205 + Gm13174 lincRNA lincRNA MGP_NODShiLtJ_T0014471.1 MGP_NODShiLtJ_G0012579.1 mouse_genomes_project 4 79563459 79565167 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066414.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398201 121407772 + MGP_NODShiLtJ_P0066414 0610037L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0066415.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398213 121405368 + MGP_NODShiLtJ_P0066415 0610037L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0066416.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398237 121405650 + 0610037L13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0066417.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398251 121405506 + MGP_NODShiLtJ_P0066417 0610037L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0066418.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398254 121404249 + MGP_NODShiLtJ_P0066418 0610037L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0066419.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398257 121403734 + MGP_NODShiLtJ_P0066419 0610037L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0066420.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398286 121405506 + MGP_NODShiLtJ_P0066420 0610037L13Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066421.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398287 121406190 + MGP_NODShiLtJ_P0066421 0610037L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0066422.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398296 121400391 + MGP_NODShiLtJ_P0066422 0610037L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0066423.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398507 121405552 + 0610037L13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0066424.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398615 121405445 + 0610037L13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0066425.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121398628 121405506 + 0610037L13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0066426.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121401561 121405441 + 0610037L13Rik protein_coding retained_intron MGP_NODShiLtJ_T0066427.1 MGP_NODShiLtJ_G0028351.1 mouse_genomes_project 4 121401757 121405506 + MGP_NODShiLtJ_P0066427 0610037L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0066110.1 MGP_NODShiLtJ_G0028289.1 mouse_genomes_project 4 112599516 112601830 + MGP_NODShiLtJ_P0066110 Foxd3 protein_coding protein_coding MGP_NODShiLtJ_T0098033.1 MGP_NODShiLtJ_G0036445.1 mouse_genomes_project 4 59500597 59500716 + n-R5s185 rRNA rRNA MGP_NODShiLtJ_T0065937.1 MGP_NODShiLtJ_G0028247.1 mouse_genomes_project 4 99990468 99990966 - MGP_NODShiLtJ_P0065937 4930553M12Rik protein_coding protein_coding MGP_NODShiLtJ_T0067257.1 MGP_NODShiLtJ_G0028537.1 mouse_genomes_project 4 137456040 137501834 + Trit1 protein_coding processed_transcript MGP_NODShiLtJ_T0067258.1 MGP_NODShiLtJ_G0028537.1 mouse_genomes_project 4 137456040 137501834 + MGP_NODShiLtJ_P0067258 Trit1 protein_coding protein_coding MGP_NODShiLtJ_T0067259.1 MGP_NODShiLtJ_G0028537.1 mouse_genomes_project 4 137495640 137501088 + Trit1 protein_coding processed_transcript MGP_NODShiLtJ_T0099300.1 MGP_NODShiLtJ_G0037694.1 mouse_genomes_project 4 135058967 135059071 + Gm24678 snRNA snRNA MGP_NODShiLtJ_T0014671.1 MGP_NODShiLtJ_G0012779.1 mouse_genomes_project 4 150954192 150954270 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064564.1 MGP_NODShiLtJ_G0027920.1 mouse_genomes_project 4 30296754 30482536 + MGP_NODShiLtJ_P0064564 Epha7 protein_coding protein_coding MGP_NODShiLtJ_T0064565.1 MGP_NODShiLtJ_G0027920.1 mouse_genomes_project 4 30296754 30460311 + MGP_NODShiLtJ_P0064565 Epha7 protein_coding protein_coding MGP_NODShiLtJ_T0064566.1 MGP_NODShiLtJ_G0027920.1 mouse_genomes_project 4 30296775 30481852 + MGP_NODShiLtJ_P0064566 Epha7 protein_coding protein_coding MGP_NODShiLtJ_T0064567.1 MGP_NODShiLtJ_G0027920.1 mouse_genomes_project 4 30296873 30482536 + MGP_NODShiLtJ_P0064567 Epha7 protein_coding protein_coding MGP_NODShiLtJ_T0064568.1 MGP_NODShiLtJ_G0027920.1 mouse_genomes_project 4 30296949 30375148 + Epha7 protein_coding processed_transcript MGP_NODShiLtJ_T0064569.1 MGP_NODShiLtJ_G0027920.1 mouse_genomes_project 4 30299052 30306170 + Epha7 protein_coding processed_transcript MGP_NODShiLtJ_T0064570.1 MGP_NODShiLtJ_G0027920.1 mouse_genomes_project 4 30373187 30456764 + Epha7 protein_coding processed_transcript MGP_NODShiLtJ_T0064571.1 MGP_NODShiLtJ_G0027920.1 mouse_genomes_project 4 30373270 30459598 + Epha7 protein_coding processed_transcript MGP_NODShiLtJ_T0014513.1 MGP_NODShiLtJ_G0012621.1 mouse_genomes_project 4 95951938 95952341 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099294.1 MGP_NODShiLtJ_G0037688.1 mouse_genomes_project 4 130696669 130696774 + Gm26355 snRNA snRNA MGP_NODShiLtJ_T0068793.1 MGP_NODShiLtJ_G0028905.1 mouse_genomes_project 4 161619998 161647504 + Dhrs3 protein_coding processed_transcript MGP_NODShiLtJ_T0068794.1 MGP_NODShiLtJ_G0028905.1 mouse_genomes_project 4 161620004 161647430 + MGP_NODShiLtJ_P0068794 Dhrs3 protein_coding protein_coding MGP_NODShiLtJ_T0068795.1 MGP_NODShiLtJ_G0028905.1 mouse_genomes_project 4 161620086 161656175 + MGP_NODShiLtJ_P0068795 Dhrs3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068796.1 MGP_NODShiLtJ_G0028905.1 mouse_genomes_project 4 161620385 161656185 + MGP_NODShiLtJ_P0068796 Dhrs3 protein_coding protein_coding MGP_NODShiLtJ_T0068797.1 MGP_NODShiLtJ_G0028905.1 mouse_genomes_project 4 161646406 161647504 + Dhrs3 protein_coding retained_intron MGP_NODShiLtJ_T0068025.1 MGP_NODShiLtJ_G0028702.1 mouse_genomes_project 4 148884031 148887278 + MGP_NODShiLtJ_P0068025 Nr0b2 protein_coding protein_coding MGP_NODShiLtJ_T0068180.1 MGP_NODShiLtJ_G0028737.1 mouse_genomes_project 4 150272838 150299304 - MGP_NODShiLtJ_P0068180 Ldlrap1 protein_coding protein_coding MGP_NODShiLtJ_T0068181.1 MGP_NODShiLtJ_G0028737.1 mouse_genomes_project 4 150277860 150281392 - Ldlrap1 protein_coding retained_intron MGP_NODShiLtJ_T0068182.1 MGP_NODShiLtJ_G0028737.1 mouse_genomes_project 4 150280700 150282136 - Ldlrap1 protein_coding retained_intron MGP_NODShiLtJ_T0014349.1 MGP_NODShiLtJ_G0012457.1 mouse_genomes_project 4 30005400 30006159 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066444.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121568895 121649765 - MGP_NODShiLtJ_P0066444 protein_coding protein_coding MGP_NODShiLtJ_T0066445.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121569323 121572939 - protein_coding processed_transcript MGP_NODShiLtJ_T0066446.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121569433 121597660 - protein_coding processed_transcript MGP_NODShiLtJ_T0066447.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121569605 121597716 - MGP_NODShiLtJ_P0066447 protein_coding protein_coding MGP_NODShiLtJ_T0066448.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121572649 121649709 - protein_coding processed_transcript MGP_NODShiLtJ_T0066449.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121614080 121649737 - MGP_NODShiLtJ_P0066449 protein_coding protein_coding MGP_NODShiLtJ_T0066450.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121618899 121649628 - protein_coding processed_transcript MGP_NODShiLtJ_T0066451.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121619208 121680057 - protein_coding processed_transcript MGP_NODShiLtJ_T0066452.1 MGP_NODShiLtJ_G0028355.1 mouse_genomes_project 4 121630778 121680061 - MGP_NODShiLtJ_P0066452 protein_coding protein_coding MGP_NODShiLtJ_T0004367.1 MGP_NODShiLtJ_G0003803.1 mouse_genomes_project 4 9124642 9128449 - Gm11832 antisense antisense MGP_NODShiLtJ_T0069220.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169962670 170026028 - MGP_NODShiLtJ_P0069220 Kcnab2 protein_coding protein_coding MGP_NODShiLtJ_T0069221.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169962672 170055039 - MGP_NODShiLtJ_P0069221 Kcnab2 protein_coding protein_coding MGP_NODShiLtJ_T0069222.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169962673 170054693 - MGP_NODShiLtJ_P0069222 Kcnab2 protein_coding protein_coding MGP_NODShiLtJ_T0069223.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169964649 170054601 - MGP_NODShiLtJ_P0069223 Kcnab2 protein_coding protein_coding MGP_NODShiLtJ_T0069224.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169964710 170026028 - MGP_NODShiLtJ_P0069224 Kcnab2 protein_coding protein_coding MGP_NODShiLtJ_T0069225.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169966916 169997750 - Kcnab2 protein_coding processed_transcript MGP_NODShiLtJ_T0069226.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169974126 170005654 - Kcnab2 protein_coding processed_transcript MGP_NODShiLtJ_T0069227.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169975046 170032217 - MGP_NODShiLtJ_P0069227 Kcnab2 protein_coding protein_coding MGP_NODShiLtJ_T0069228.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169976146 170025929 - Kcnab2 protein_coding processed_transcript MGP_NODShiLtJ_T0069229.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169984950 170054712 - Kcnab2 protein_coding retained_intron MGP_NODShiLtJ_T0069230.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169985104 170000851 - Kcnab2 protein_coding processed_transcript MGP_NODShiLtJ_T0069231.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 169985934 169991515 - Kcnab2 protein_coding processed_transcript MGP_NODShiLtJ_T0069232.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 170001420 170025929 - Kcnab2 protein_coding processed_transcript MGP_NODShiLtJ_T0069233.1 MGP_NODShiLtJ_G0028986.1 mouse_genomes_project 4 170009792 170054663 - MGP_NODShiLtJ_P0069233 Kcnab2 protein_coding protein_coding MGP_NODShiLtJ_T0065917.1 MGP_NODShiLtJ_G0028231.1 mouse_genomes_project 4 99628736 99629309 - MGP_NODShiLtJ_P0065917 Ifna15 protein_coding protein_coding MGP_NODShiLtJ_T0065974.1 MGP_NODShiLtJ_G0028260.1 mouse_genomes_project 4 107042079 107149575 + MGP_NODShiLtJ_P0065974 Ift74 protein_coding protein_coding MGP_NODShiLtJ_T0065975.1 MGP_NODShiLtJ_G0028260.1 mouse_genomes_project 4 107042079 107117459 + MGP_NODShiLtJ_P0065975 Ift74 protein_coding protein_coding MGP_NODShiLtJ_T0065976.1 MGP_NODShiLtJ_G0028260.1 mouse_genomes_project 4 107042108 107149587 + MGP_NODShiLtJ_P0065976 Ift74 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065977.1 MGP_NODShiLtJ_G0028260.1 mouse_genomes_project 4 107132941 107142367 + Ift74 protein_coding processed_transcript MGP_NODShiLtJ_T0069141.1 MGP_NODShiLtJ_G0028973.1 mouse_genomes_project 4 169569424 169581216 - MGP_NODShiLtJ_P0069141 Tas1r1 protein_coding protein_coding MGP_NODShiLtJ_T0069142.1 MGP_NODShiLtJ_G0028973.1 mouse_genomes_project 4 169569576 169580062 - MGP_NODShiLtJ_P0069142 Tas1r1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068632.1 MGP_NODShiLtJ_G0028845.1 mouse_genomes_project 4 157432839 157442549 + MGP_NODShiLtJ_P0068632 Rsg1 protein_coding protein_coding MGP_NODShiLtJ_T0068633.1 MGP_NODShiLtJ_G0028845.1 mouse_genomes_project 4 157433328 157441078 + Rsg1 protein_coding processed_transcript MGP_NODShiLtJ_T0068634.1 MGP_NODShiLtJ_G0028845.1 mouse_genomes_project 4 157441049 157459179 + Rsg1 protein_coding processed_transcript MGP_NODShiLtJ_T0068704.1 MGP_NODShiLtJ_G0028863.1 mouse_genomes_project 4 158087727 158092201 + Casp9 protein_coding processed_transcript MGP_NODShiLtJ_T0068705.1 MGP_NODShiLtJ_G0028863.1 mouse_genomes_project 4 158087825 158095831 + MGP_NODShiLtJ_P0068705 Casp9 protein_coding protein_coding MGP_NODShiLtJ_T0068706.1 MGP_NODShiLtJ_G0028863.1 mouse_genomes_project 4 158087959 158090689 + Casp9 protein_coding processed_transcript MGP_NODShiLtJ_T0068707.1 MGP_NODShiLtJ_G0028863.1 mouse_genomes_project 4 158087970 158106326 + MGP_NODShiLtJ_P0068707 Casp9 protein_coding protein_coding MGP_NODShiLtJ_T0068708.1 MGP_NODShiLtJ_G0028863.1 mouse_genomes_project 4 158105136 158106355 + Casp9 protein_coding processed_transcript MGP_NODShiLtJ_T0067665.1 MGP_NODShiLtJ_G0028634.1 mouse_genomes_project 4 144674884 144684820 - MGP_NODShiLtJ_P0067665 Eif3i protein_coding protein_coding MGP_NODShiLtJ_T0067666.1 MGP_NODShiLtJ_G0028634.1 mouse_genomes_project 4 144676255 144680002 - Eif3i protein_coding retained_intron MGP_NODShiLtJ_T0067667.1 MGP_NODShiLtJ_G0028634.1 mouse_genomes_project 4 144676452 144684771 - MGP_NODShiLtJ_P0067667 Eif3i protein_coding protein_coding MGP_NODShiLtJ_T0067668.1 MGP_NODShiLtJ_G0028634.1 mouse_genomes_project 4 144679360 144684771 - Eif3i protein_coding processed_transcript MGP_NODShiLtJ_T0067669.1 MGP_NODShiLtJ_G0028634.1 mouse_genomes_project 4 144682381 144684788 - Eif3i protein_coding retained_intron MGP_NODShiLtJ_T0014442.1 MGP_NODShiLtJ_G0012550.1 mouse_genomes_project 4 61285475 61285903 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010467.1 MGP_NODShiLtJ_G0008600.1 mouse_genomes_project 4 152381 152483 + Mir3471-2 miRNA miRNA MGP_NODShiLtJ_T0001387.1 MGP_NODShiLtJ_G0001307.1 mouse_genomes_project 4 122217269 122219557 - TEC TEC MGP_NODShiLtJ_T0007751.1 MGP_NODShiLtJ_G0006329.1 mouse_genomes_project 4 22147740 22152074 + lincRNA lincRNA MGP_NODShiLtJ_T0068838.1 MGP_NODShiLtJ_G0028916.1 mouse_genomes_project 4 165075372 165076790 + MGP_NODShiLtJ_P0068838 Nppb protein_coding protein_coding MGP_NODShiLtJ_T0067094.1 MGP_NODShiLtJ_G0028496.1 mouse_genomes_project 4 133195730 133201509 + MGP_NODShiLtJ_P0067094 Svbp protein_coding protein_coding MGP_NODShiLtJ_T0067095.1 MGP_NODShiLtJ_G0028496.1 mouse_genomes_project 4 133195831 133201509 + MGP_NODShiLtJ_P0067095 Svbp protein_coding protein_coding MGP_NODShiLtJ_T0067096.1 MGP_NODShiLtJ_G0028496.1 mouse_genomes_project 4 133195920 133201509 + MGP_NODShiLtJ_P0067096 Svbp protein_coding protein_coding MGP_NODShiLtJ_T0014390.1 MGP_NODShiLtJ_G0012498.1 mouse_genomes_project 4 44100081 44100499 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069571.1 MGP_NODShiLtJ_G0029048.1 mouse_genomes_project 4 173922570 173941476 - MGP_NODShiLtJ_P0069571 Ttll10 protein_coding protein_coding MGP_NODShiLtJ_T0069572.1 MGP_NODShiLtJ_G0029048.1 mouse_genomes_project 4 173922643 173950082 - MGP_NODShiLtJ_P0069572 Ttll10 protein_coding protein_coding MGP_NODShiLtJ_T0069573.1 MGP_NODShiLtJ_G0029048.1 mouse_genomes_project 4 173923030 173941124 - MGP_NODShiLtJ_P0069573 Ttll10 protein_coding protein_coding MGP_NODShiLtJ_T0069574.1 MGP_NODShiLtJ_G0029048.1 mouse_genomes_project 4 173923535 173934648 - Ttll10 protein_coding processed_transcript MGP_NODShiLtJ_T0069575.1 MGP_NODShiLtJ_G0029048.1 mouse_genomes_project 4 173932946 173950009 - Ttll10 protein_coding retained_intron MGP_NODShiLtJ_T0069576.1 MGP_NODShiLtJ_G0029048.1 mouse_genomes_project 4 173933723 173935508 - Ttll10 protein_coding processed_transcript MGP_NODShiLtJ_T0069577.1 MGP_NODShiLtJ_G0029048.1 mouse_genomes_project 4 173933733 173938633 - Ttll10 protein_coding processed_transcript MGP_NODShiLtJ_T0069578.1 MGP_NODShiLtJ_G0029048.1 mouse_genomes_project 4 173937447 173938601 - Ttll10 protein_coding retained_intron MGP_NODShiLtJ_T0004479.1 MGP_NODShiLtJ_G0003890.1 mouse_genomes_project 4 143104064 143140588 - Csmd2os antisense antisense MGP_NODShiLtJ_T0004480.1 MGP_NODShiLtJ_G0003890.1 mouse_genomes_project 4 143104064 143136888 - Csmd2os antisense antisense MGP_NODShiLtJ_T0014560.1 MGP_NODShiLtJ_G0012668.1 mouse_genomes_project 4 114936126 114936727 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066517.1 MGP_NODShiLtJ_G0028370.1 mouse_genomes_project 4 122464423 122465645 - MGP_NODShiLtJ_P0066517 A730015C16Rik protein_coding protein_coding MGP_NODShiLtJ_T0099308.1 MGP_NODShiLtJ_G0037702.1 mouse_genomes_project 4 145003246 145003398 + Gm23845 snRNA snRNA MGP_NODShiLtJ_T0004527.1 MGP_NODShiLtJ_G0003927.1 mouse_genomes_project 4 165186991 165188612 - Gm13201 antisense antisense MGP_NODShiLtJ_T0004528.1 MGP_NODShiLtJ_G0003927.1 mouse_genomes_project 4 165187206 165190622 - Gm13201 antisense antisense MGP_NODShiLtJ_T0101941.1 MGP_NODShiLtJ_G0040109.1 mouse_genomes_project 4 160593673 160595875 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0068254.1 MGP_NODShiLtJ_G0028754.1 mouse_genomes_project 4 151469674 151483900 + MGP_NODShiLtJ_P0068254 Srsf10 protein_coding protein_coding MGP_NODShiLtJ_T0068255.1 MGP_NODShiLtJ_G0028754.1 mouse_genomes_project 4 151469674 151482532 + MGP_NODShiLtJ_P0068255 Srsf10 protein_coding protein_coding MGP_NODShiLtJ_T0068256.1 MGP_NODShiLtJ_G0028754.1 mouse_genomes_project 4 151469805 151482532 + Srsf10 protein_coding processed_transcript MGP_NODShiLtJ_T0068257.1 MGP_NODShiLtJ_G0028754.1 mouse_genomes_project 4 151470039 151472731 + Srsf10 protein_coding processed_transcript MGP_NODShiLtJ_T0068258.1 MGP_NODShiLtJ_G0028754.1 mouse_genomes_project 4 151470059 151473161 + Srsf10 protein_coding processed_transcript MGP_NODShiLtJ_T0068259.1 MGP_NODShiLtJ_G0028754.1 mouse_genomes_project 4 151475717 151477585 + Srsf10 protein_coding processed_transcript MGP_NODShiLtJ_T0068260.1 MGP_NODShiLtJ_G0028754.1 mouse_genomes_project 4 151475749 151478959 + Srsf10 protein_coding processed_transcript MGP_NODShiLtJ_T0068261.1 MGP_NODShiLtJ_G0028754.1 mouse_genomes_project 4 151477216 151479002 + Srsf10 protein_coding processed_transcript MGP_NODShiLtJ_T0066491.1 MGP_NODShiLtJ_G0028364.1 mouse_genomes_project 4 122170539 122188025 + Orc1 protein_coding processed_transcript MGP_NODShiLtJ_T0066492.1 MGP_NODShiLtJ_G0028364.1 mouse_genomes_project 4 122170550 122188166 + Orc1 protein_coding processed_transcript MGP_NODShiLtJ_T0066493.1 MGP_NODShiLtJ_G0028364.1 mouse_genomes_project 4 122170570 122209176 + MGP_NODShiLtJ_P0066493 Orc1 protein_coding protein_coding MGP_NODShiLtJ_T0066494.1 MGP_NODShiLtJ_G0028364.1 mouse_genomes_project 4 122180481 122181264 + Orc1 protein_coding processed_transcript MGP_NODShiLtJ_T0066495.1 MGP_NODShiLtJ_G0028364.1 mouse_genomes_project 4 122197529 122199482 + Orc1 protein_coding processed_transcript MGP_NODShiLtJ_T0014702.1 MGP_NODShiLtJ_G0012810.1 mouse_genomes_project 4 163798127 163798472 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066758.1 MGP_NODShiLtJ_G0028423.1 mouse_genomes_project 4 129775517 129797202 + MGP_NODShiLtJ_P0066758 Lrrc41 protein_coding protein_coding MGP_NODShiLtJ_T0066759.1 MGP_NODShiLtJ_G0028423.1 mouse_genomes_project 4 129775711 129783219 + Lrrc41 protein_coding processed_transcript MGP_NODShiLtJ_T0066760.1 MGP_NODShiLtJ_G0028423.1 mouse_genomes_project 4 129775793 129788688 + Lrrc41 protein_coding processed_transcript MGP_NODShiLtJ_T0066761.1 MGP_NODShiLtJ_G0028423.1 mouse_genomes_project 4 129777133 129788757 + Lrrc41 protein_coding processed_transcript MGP_NODShiLtJ_T0066762.1 MGP_NODShiLtJ_G0028423.1 mouse_genomes_project 4 129779666 129783217 + Lrrc41 protein_coding processed_transcript MGP_NODShiLtJ_T0066763.1 MGP_NODShiLtJ_G0028423.1 mouse_genomes_project 4 129789640 129793468 + Lrrc41 protein_coding processed_transcript MGP_NODShiLtJ_T0007803.1 MGP_NODShiLtJ_G0006374.1 mouse_genomes_project 4 70821746 70845722 - Gm11217 lincRNA lincRNA MGP_NODShiLtJ_T0014480.1 MGP_NODShiLtJ_G0012588.1 mouse_genomes_project 4 83231533 83232186 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014370.1 MGP_NODShiLtJ_G0012478.1 mouse_genomes_project 4 36953792 36954084 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068625.1 MGP_NODShiLtJ_G0028843.1 mouse_genomes_project 4 157327653 157357686 - Szrd1 protein_coding processed_transcript MGP_NODShiLtJ_T0068626.1 MGP_NODShiLtJ_G0028843.1 mouse_genomes_project 4 157327653 157357686 - Szrd1 protein_coding processed_transcript MGP_NODShiLtJ_T0068627.1 MGP_NODShiLtJ_G0028843.1 mouse_genomes_project 4 157327653 157357677 - MGP_NODShiLtJ_P0068627 Szrd1 protein_coding protein_coding MGP_NODShiLtJ_T0068628.1 MGP_NODShiLtJ_G0028843.1 mouse_genomes_project 4 157327653 157357638 - MGP_NODShiLtJ_P0068628 Szrd1 protein_coding protein_coding MGP_NODShiLtJ_T0068629.1 MGP_NODShiLtJ_G0028843.1 mouse_genomes_project 4 157331202 157357651 - Szrd1 protein_coding processed_transcript MGP_NODShiLtJ_T0017950.1 MGP_NODShiLtJ_G0015444.1 mouse_genomes_project 4 147016556 147038065 - Gm12992 processed_transcript processed_transcript MGP_NODShiLtJ_T0017951.1 MGP_NODShiLtJ_G0015444.1 mouse_genomes_project 4 147030411 147033556 - Gm12992 processed_transcript processed_transcript MGP_NODShiLtJ_T0068262.1 MGP_NODShiLtJ_G0028755.1 mouse_genomes_project 4 151484863 151487796 - MGP_NODShiLtJ_P0068262 Pnrc2 protein_coding protein_coding MGP_NODShiLtJ_T0068263.1 MGP_NODShiLtJ_G0028755.1 mouse_genomes_project 4 151486269 151487516 - MGP_NODShiLtJ_P0068263 Pnrc2 protein_coding protein_coding MGP_NODShiLtJ_T0068264.1 MGP_NODShiLtJ_G0028755.1 mouse_genomes_project 4 151486396 151487007 - MGP_NODShiLtJ_P0068264 Pnrc2 protein_coding protein_coding MGP_NODShiLtJ_T0067994.1 MGP_NODShiLtJ_G0028694.1 mouse_genomes_project 4 148540133 148550189 - MGP_NODShiLtJ_P0067994 Sytl1 protein_coding protein_coding MGP_NODShiLtJ_T0067995.1 MGP_NODShiLtJ_G0028694.1 mouse_genomes_project 4 148540133 148550163 - MGP_NODShiLtJ_P0067995 Sytl1 protein_coding protein_coding MGP_NODShiLtJ_T0067996.1 MGP_NODShiLtJ_G0028694.1 mouse_genomes_project 4 148540141 148550163 - Sytl1 protein_coding processed_transcript MGP_NODShiLtJ_T0067997.1 MGP_NODShiLtJ_G0028694.1 mouse_genomes_project 4 148540204 148550128 - Sytl1 protein_coding processed_transcript MGP_NODShiLtJ_T0064818.1 MGP_NODShiLtJ_G0027982.1 mouse_genomes_project 4 45854133 45855633 - MGP_NODShiLtJ_P0064818 Rpp25l protein_coding protein_coding MGP_NODShiLtJ_T0065123.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48865354 49061336 - MGP_NODShiLtJ_P0065123 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065124.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48871758 49061267 - MGP_NODShiLtJ_P0065124 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065125.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48871758 49061267 - MGP_NODShiLtJ_P0065125 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065126.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48871758 49061267 - MGP_NODShiLtJ_P0065126 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065127.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48871758 49061267 - MGP_NODShiLtJ_P0065127 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065128.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48871758 49061267 - MGP_NODShiLtJ_P0065128 Pax5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065129.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48872112 49061257 - MGP_NODShiLtJ_P0065129 Pax5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065130.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48872112 49061257 - MGP_NODShiLtJ_P0065130 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065131.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48872112 49061257 - MGP_NODShiLtJ_P0065131 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065132.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48872112 49061257 - MGP_NODShiLtJ_P0065132 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065133.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48872112 49061257 - MGP_NODShiLtJ_P0065133 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065134.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48872112 49061257 - MGP_NODShiLtJ_P0065134 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065135.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48872112 49061257 - MGP_NODShiLtJ_P0065135 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065136.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48872119 48994884 - MGP_NODShiLtJ_P0065136 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065137.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 48914395 49034661 - Pax5 protein_coding processed_transcript MGP_NODShiLtJ_T0065138.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 49030257 49054853 - MGP_NODShiLtJ_P0065138 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065139.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 49030271 49054260 - Pax5 protein_coding processed_transcript MGP_NODShiLtJ_T0065140.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 49030271 49054260 - Pax5 protein_coding processed_transcript MGP_NODShiLtJ_T0065141.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 49030271 49054260 - Pax5 protein_coding processed_transcript MGP_NODShiLtJ_T0065142.1 MGP_NODShiLtJ_G0028040.1 mouse_genomes_project 4 49030271 49054260 - MGP_NODShiLtJ_P0065142 Pax5 protein_coding protein_coding MGP_NODShiLtJ_T0065007.1 MGP_NODShiLtJ_G0028015.1 mouse_genomes_project 4 47768854 47778656 - Tpm2 protein_coding processed_transcript MGP_NODShiLtJ_T0065008.1 MGP_NODShiLtJ_G0028015.1 mouse_genomes_project 4 47768854 47778682 - MGP_NODShiLtJ_P0065008 Tpm2 protein_coding protein_coding MGP_NODShiLtJ_T0065009.1 MGP_NODShiLtJ_G0028015.1 mouse_genomes_project 4 47768854 47778813 - MGP_NODShiLtJ_P0065009 Tpm2 protein_coding protein_coding MGP_NODShiLtJ_T0065010.1 MGP_NODShiLtJ_G0028015.1 mouse_genomes_project 4 47768855 47778606 - MGP_NODShiLtJ_P0065010 Tpm2 protein_coding protein_coding MGP_NODShiLtJ_T0065011.1 MGP_NODShiLtJ_G0028015.1 mouse_genomes_project 4 47769825 47774886 - Tpm2 protein_coding processed_transcript MGP_NODShiLtJ_T0065012.1 MGP_NODShiLtJ_G0028015.1 mouse_genomes_project 4 47774884 47778983 - MGP_NODShiLtJ_P0065012 Tpm2 protein_coding protein_coding MGP_NODShiLtJ_T0067140.1 MGP_NODShiLtJ_G0028504.1 mouse_genomes_project 4 133448755 133452584 - Ppcs protein_coding retained_intron MGP_NODShiLtJ_T0067141.1 MGP_NODShiLtJ_G0028504.1 mouse_genomes_project 4 133448755 133452646 - MGP_NODShiLtJ_P0067141 Ppcs protein_coding protein_coding MGP_NODShiLtJ_T0067142.1 MGP_NODShiLtJ_G0028504.1 mouse_genomes_project 4 133448755 133452602 - MGP_NODShiLtJ_P0067142 Ppcs protein_coding protein_coding MGP_NODShiLtJ_T0101926.1 MGP_NODShiLtJ_G0040094.1 mouse_genomes_project 4 130969087 130972468 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014343.1 MGP_NODShiLtJ_G0012451.1 mouse_genomes_project 4 28145099 28145369 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069026.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167220028 167283272 - MGP_NODShiLtJ_P0069026 Spsb1 protein_coding protein_coding MGP_NODShiLtJ_T0069027.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167221699 167233597 - MGP_NODShiLtJ_P0069027 Spsb1 protein_coding protein_coding MGP_NODShiLtJ_T0069028.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167221945 167231070 - MGP_NODShiLtJ_P0069028 Spsb1 protein_coding protein_coding MGP_NODShiLtJ_T0069029.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167230287 167282034 - MGP_NODShiLtJ_P0069029 Spsb1 protein_coding protein_coding MGP_NODShiLtJ_T0069030.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167230771 167248339 - MGP_NODShiLtJ_P0069030 Spsb1 protein_coding protein_coding MGP_NODShiLtJ_T0069031.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167230775 167259095 - MGP_NODShiLtJ_P0069031 Spsb1 protein_coding protein_coding MGP_NODShiLtJ_T0069032.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167230780 167270905 - MGP_NODShiLtJ_P0069032 Spsb1 protein_coding protein_coding MGP_NODShiLtJ_T0069033.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167230829 167274396 - MGP_NODShiLtJ_P0069033 Spsb1 protein_coding protein_coding MGP_NODShiLtJ_T0069034.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167230922 167283272 - Spsb1 protein_coding processed_transcript MGP_NODShiLtJ_T0069035.1 MGP_NODShiLtJ_G0028951.1 mouse_genomes_project 4 167233345 167283260 - Spsb1 protein_coding processed_transcript MGP_NODShiLtJ_T0100569.1 MGP_NODShiLtJ_G0038963.1 mouse_genomes_project 4 123213317 123213448 + Gm22497 snoRNA snoRNA MGP_NODShiLtJ_T0067322.1 MGP_NODShiLtJ_G0028552.1 mouse_genomes_project 4 139265108 139265981 - MGP_NODShiLtJ_P0067322 3100002H09Rik protein_coding protein_coding MGP_NODShiLtJ_T0007873.1 MGP_NODShiLtJ_G0006431.1 mouse_genomes_project 4 138927534 138935957 - Gm12916 lincRNA lincRNA MGP_NODShiLtJ_T0066556.1 MGP_NODShiLtJ_G0028375.1 mouse_genomes_project 4 122877720 122914558 + MGP_NODShiLtJ_P0066556 Calr4 protein_coding protein_coding MGP_NODShiLtJ_T0066557.1 MGP_NODShiLtJ_G0028375.1 mouse_genomes_project 4 122893933 122914808 + MGP_NODShiLtJ_P0066557 Calr4 protein_coding protein_coding MGP_NODShiLtJ_T0066558.1 MGP_NODShiLtJ_G0028375.1 mouse_genomes_project 4 122895080 122914808 + MGP_NODShiLtJ_P0066558 Calr4 protein_coding protein_coding MGP_NODShiLtJ_T0066559.1 MGP_NODShiLtJ_G0028375.1 mouse_genomes_project 4 122904027 122914380 + Calr4 protein_coding processed_transcript MGP_NODShiLtJ_T0014493.1 MGP_NODShiLtJ_G0012601.1 mouse_genomes_project 4 85885123 85886160 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014484.1 MGP_NODShiLtJ_G0012592.1 mouse_genomes_project 4 83831334 83832715 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068936.1 MGP_NODShiLtJ_G0028934.1 mouse_genomes_project 4 165814457 165846807 + MGP_NODShiLtJ_P0068936 Gm572 protein_coding protein_coding MGP_NODShiLtJ_T0014367.1 MGP_NODShiLtJ_G0012475.1 mouse_genomes_project 4 35801795 35802194 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064671.1 MGP_NODShiLtJ_G0027944.1 mouse_genomes_project 4 37262641 37277599 - MGP_NODShiLtJ_P0064671 Gm136 protein_coding protein_coding MGP_NODShiLtJ_T0014647.1 MGP_NODShiLtJ_G0012755.1 mouse_genomes_project 4 141641924 141642872 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007938.1 MGP_NODShiLtJ_G0006471.1 mouse_genomes_project 4 154110649 154111125 + 2310026L22Rik lincRNA lincRNA MGP_NODShiLtJ_T0100550.1 MGP_NODShiLtJ_G0038944.1 mouse_genomes_project 4 73413102 73413235 + Gm25480 snoRNA snoRNA MGP_NODShiLtJ_T0064469.1 MGP_NODShiLtJ_G0027896.1 mouse_genomes_project 4 18835414 18895572 + MGP_NODShiLtJ_P0064469 Gm12353 protein_coding protein_coding MGP_NODShiLtJ_T0017913.1 MGP_NODShiLtJ_G0015421.1 mouse_genomes_project 4 100539978 100572226 + processed_transcript processed_transcript MGP_NODShiLtJ_T0068780.1 MGP_NODShiLtJ_G0028893.1 mouse_genomes_project 4 160991734 161016011 + MGP_NODShiLtJ_P0068780 protein_coding protein_coding MGP_NODShiLtJ_T0011474.1 MGP_NODShiLtJ_G0009607.1 mouse_genomes_project 4 137984428 137984534 + Gm23548 misc_RNA misc_RNA MGP_NODShiLtJ_T0004465.1 MGP_NODShiLtJ_G0003879.1 mouse_genomes_project 4 133260189 133264608 - Gm12927 antisense antisense MGP_NODShiLtJ_T0067331.1 MGP_NODShiLtJ_G0028557.1 mouse_genomes_project 4 139413662 139475248 + MGP_NODShiLtJ_P0067331 Inpp5b protein_coding protein_coding MGP_NODShiLtJ_T0067332.1 MGP_NODShiLtJ_G0028557.1 mouse_genomes_project 4 139413670 139423341 + MGP_NODShiLtJ_P0067332 Inpp5b protein_coding protein_coding MGP_NODShiLtJ_T0067333.1 MGP_NODShiLtJ_G0028557.1 mouse_genomes_project 4 139413684 139475242 + MGP_NODShiLtJ_P0067333 Inpp5b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067334.1 MGP_NODShiLtJ_G0028557.1 mouse_genomes_project 4 139413690 139423303 + MGP_NODShiLtJ_P0067334 Inpp5b protein_coding protein_coding MGP_NODShiLtJ_T0067335.1 MGP_NODShiLtJ_G0028557.1 mouse_genomes_project 4 139440843 139454119 + Inpp5b protein_coding processed_transcript MGP_NODShiLtJ_T0067336.1 MGP_NODShiLtJ_G0028557.1 mouse_genomes_project 4 139440950 139454172 + Inpp5b protein_coding processed_transcript MGP_NODShiLtJ_T0067337.1 MGP_NODShiLtJ_G0028557.1 mouse_genomes_project 4 139468822 139471630 + Inpp5b protein_coding processed_transcript MGP_NODShiLtJ_T0067338.1 MGP_NODShiLtJ_G0028557.1 mouse_genomes_project 4 139473283 139474847 + Inpp5b protein_coding processed_transcript MGP_NODShiLtJ_T0014665.1 MGP_NODShiLtJ_G0012773.1 mouse_genomes_project 4 149289867 149290050 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064822.1 MGP_NODShiLtJ_G0027984.1 mouse_genomes_project 4 45866939 45877146 - MGP_NODShiLtJ_P0064822 Arid3c protein_coding protein_coding MGP_NODShiLtJ_T0064823.1 MGP_NODShiLtJ_G0027984.1 mouse_genomes_project 4 45867242 45873388 - MGP_NODShiLtJ_P0064823 Arid3c protein_coding protein_coding MGP_NODShiLtJ_T0064824.1 MGP_NODShiLtJ_G0027984.1 mouse_genomes_project 4 45867242 45873388 - MGP_NODShiLtJ_P0064824 Arid3c protein_coding protein_coding MGP_NODShiLtJ_T0064825.1 MGP_NODShiLtJ_G0027984.1 mouse_genomes_project 4 45873027 45877146 - MGP_NODShiLtJ_P0064825 Arid3c protein_coding protein_coding MGP_NODShiLtJ_T0014291.1 MGP_NODShiLtJ_G0012399.1 mouse_genomes_project 4 11385560 11386296 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069377.1 MGP_NODShiLtJ_G0029013.1 mouse_genomes_project 4 172964359 173001118 - Ski protein_coding processed_transcript MGP_NODShiLtJ_T0069378.1 MGP_NODShiLtJ_G0029013.1 mouse_genomes_project 4 172964359 173036257 - MGP_NODShiLtJ_P0069378 Ski protein_coding protein_coding MGP_NODShiLtJ_T0069379.1 MGP_NODShiLtJ_G0029013.1 mouse_genomes_project 4 172964359 173036314 - MGP_NODShiLtJ_P0069379 Ski protein_coding protein_coding MGP_NODShiLtJ_T0097807.1 MGP_NODShiLtJ_G0036219.1 mouse_genomes_project 4 65672098 65672570 + pseudogene pseudogene MGP_NODShiLtJ_T0069334.1 MGP_NODShiLtJ_G0029006.1 mouse_genomes_project 4 172717724 172723715 - MGP_NODShiLtJ_P0069334 Tnfrsf14 protein_coding protein_coding MGP_NODShiLtJ_T0069335.1 MGP_NODShiLtJ_G0029006.1 mouse_genomes_project 4 172717724 172723590 - MGP_NODShiLtJ_P0069335 Tnfrsf14 protein_coding protein_coding MGP_NODShiLtJ_T0069336.1 MGP_NODShiLtJ_G0029006.1 mouse_genomes_project 4 172717758 172723559 - MGP_NODShiLtJ_P0069336 Tnfrsf14 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069337.1 MGP_NODShiLtJ_G0029006.1 mouse_genomes_project 4 172717775 172724065 - MGP_NODShiLtJ_P0069337 Tnfrsf14 protein_coding protein_coding MGP_NODShiLtJ_T0069338.1 MGP_NODShiLtJ_G0029006.1 mouse_genomes_project 4 172719985 172724065 - Tnfrsf14 protein_coding processed_transcript MGP_NODShiLtJ_T0069339.1 MGP_NODShiLtJ_G0029006.1 mouse_genomes_project 4 172722140 172724076 - Tnfrsf14 protein_coding processed_transcript MGP_NODShiLtJ_T0099253.1 MGP_NODShiLtJ_G0037647.1 mouse_genomes_project 4 43172081 43172245 - Gm25581 snRNA snRNA MGP_NODShiLtJ_T0014317.1 MGP_NODShiLtJ_G0012425.1 mouse_genomes_project 4 18376570 18377418 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064749.1 MGP_NODShiLtJ_G0027964.1 mouse_genomes_project 4 44987598 44999483 - MGP_NODShiLtJ_P0064749 Bag1 protein_coding protein_coding MGP_NODShiLtJ_T0064750.1 MGP_NODShiLtJ_G0027964.1 mouse_genomes_project 4 44987599 44999496 - MGP_NODShiLtJ_P0064750 Bag1 protein_coding protein_coding MGP_NODShiLtJ_T0064751.1 MGP_NODShiLtJ_G0027964.1 mouse_genomes_project 4 44987601 44999445 - MGP_NODShiLtJ_P0064751 Bag1 protein_coding protein_coding MGP_NODShiLtJ_T0065263.1 MGP_NODShiLtJ_G0028068.1 mouse_genomes_project 4 51065417 51099138 - MGP_NODShiLtJ_P0065263 Coro2a protein_coding protein_coding MGP_NODShiLtJ_T0065264.1 MGP_NODShiLtJ_G0028068.1 mouse_genomes_project 4 51065423 51099156 - MGP_NODShiLtJ_P0065264 Coro2a protein_coding protein_coding MGP_NODShiLtJ_T0065265.1 MGP_NODShiLtJ_G0028068.1 mouse_genomes_project 4 51065423 51136708 - MGP_NODShiLtJ_P0065265 Coro2a protein_coding protein_coding MGP_NODShiLtJ_T0065266.1 MGP_NODShiLtJ_G0028068.1 mouse_genomes_project 4 51069023 51073240 - Coro2a protein_coding processed_transcript MGP_NODShiLtJ_T0065267.1 MGP_NODShiLtJ_G0028068.1 mouse_genomes_project 4 51069798 51073376 - Coro2a protein_coding retained_intron MGP_NODShiLtJ_T0065268.1 MGP_NODShiLtJ_G0028068.1 mouse_genomes_project 4 51073574 51136412 - Coro2a protein_coding retained_intron MGP_NODShiLtJ_T0007775.1 MGP_NODShiLtJ_G0006352.1 mouse_genomes_project 4 53631809 53703425 + lincRNA lincRNA MGP_NODShiLtJ_T0064257.1 MGP_NODShiLtJ_G0027844.1 mouse_genomes_project 4 771538 800541 - MGP_NODShiLtJ_P0064257 Sdr16c6 protein_coding protein_coding MGP_NODShiLtJ_T0064258.1 MGP_NODShiLtJ_G0027844.1 mouse_genomes_project 4 771540 801132 - MGP_NODShiLtJ_P0064258 Sdr16c6 protein_coding protein_coding MGP_NODShiLtJ_T0065725.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84803328 85382840 - MGP_NODShiLtJ_P0065725 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065726.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84803329 85029052 - MGP_NODShiLtJ_P0065726 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065727.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84807898 85568026 - MGP_NODShiLtJ_P0065727 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065728.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84808050 85265485 - MGP_NODShiLtJ_P0065728 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065729.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84808050 85154234 - MGP_NODShiLtJ_P0065729 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065730.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84808050 85154234 - MGP_NODShiLtJ_P0065730 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065731.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84808050 85154234 - MGP_NODShiLtJ_P0065731 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065732.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84808050 85154234 - MGP_NODShiLtJ_P0065732 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065733.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84808050 85154234 - MGP_NODShiLtJ_P0065733 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065734.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84955621 84978316 - Ptprd protein_coding retained_intron MGP_NODShiLtJ_T0065735.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84957744 84959890 - MGP_NODShiLtJ_P0065735 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065736.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 84976264 84985050 - MGP_NODShiLtJ_P0065736 Ptprd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065737.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 85028328 85029313 - MGP_NODShiLtJ_P0065737 Ptprd protein_coding protein_coding MGP_NODShiLtJ_T0065738.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 85034713 87662170 - Ptprd protein_coding processed_transcript MGP_NODShiLtJ_T0065739.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 85035689 85154234 - Ptprd protein_coding processed_transcript MGP_NODShiLtJ_T0065740.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 85563933 87662168 - Ptprd protein_coding processed_transcript MGP_NODShiLtJ_T0065741.1 MGP_NODShiLtJ_G0028200.1 mouse_genomes_project 4 86525273 87662170 - Ptprd protein_coding processed_transcript MGP_NODShiLtJ_T0098380.1 MGP_NODShiLtJ_G0036785.1 mouse_genomes_project 4 94405465 94405946 + Gm26968 sense_intronic sense_intronic MGP_NODShiLtJ_T0065250.1 MGP_NODShiLtJ_G0028064.1 mouse_genomes_project 4 50909271 50928425 - MGP_NODShiLtJ_P0065250 Hemgn protein_coding protein_coding MGP_NODShiLtJ_T0065251.1 MGP_NODShiLtJ_G0028064.1 mouse_genomes_project 4 50909271 50919494 - MGP_NODShiLtJ_P0065251 Hemgn protein_coding protein_coding MGP_NODShiLtJ_T0014697.1 MGP_NODShiLtJ_G0012805.1 mouse_genomes_project 4 161199150 161199699 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100547.1 MGP_NODShiLtJ_G0038941.1 mouse_genomes_project 4 69255396 69255529 + Gm24117 snoRNA snoRNA MGP_NODShiLtJ_T0004438.1 MGP_NODShiLtJ_G0003859.1 mouse_genomes_project 4 120832716 120835029 - Gm12869 antisense antisense MGP_NODShiLtJ_T0004557.1 MGP_NODShiLtJ_G0003950.1 mouse_genomes_project 4 173171339 173172122 + Gm27200 antisense antisense MGP_NODShiLtJ_T0099245.1 MGP_NODShiLtJ_G0037639.1 mouse_genomes_project 4 15053900 15054006 - Gm23975 snRNA snRNA MGP_NODShiLtJ_T0065078.1 MGP_NODShiLtJ_G0028032.1 mouse_genomes_project 4 48134547 48138304 + MGP_NODShiLtJ_P0065078 Olfr155 protein_coding protein_coding MGP_NODShiLtJ_T0065079.1 MGP_NODShiLtJ_G0028032.1 mouse_genomes_project 4 48137325 48138497 + MGP_NODShiLtJ_P0065079 Olfr155 protein_coding protein_coding MGP_NODShiLtJ_T0064623.1 MGP_NODShiLtJ_G0027933.1 mouse_genomes_project 4 35491925 35507019 - MGP_NODShiLtJ_P0064623 Pm20d2 protein_coding protein_coding MGP_NODShiLtJ_T0064624.1 MGP_NODShiLtJ_G0027933.1 mouse_genomes_project 4 35499187 35507323 - MGP_NODShiLtJ_P0064624 Pm20d2 protein_coding protein_coding MGP_NODShiLtJ_T0007820.1 MGP_NODShiLtJ_G0006389.1 mouse_genomes_project 4 100206503 100249486 + Gm12603 lincRNA lincRNA MGP_NODShiLtJ_T0007821.1 MGP_NODShiLtJ_G0006389.1 mouse_genomes_project 4 100219076 100249589 + Gm12603 lincRNA lincRNA MGP_NODShiLtJ_T0068251.1 MGP_NODShiLtJ_G0028753.1 mouse_genomes_project 4 151357700 151412887 + MGP_NODShiLtJ_P0068251 Myom3 protein_coding protein_coding MGP_NODShiLtJ_T0068252.1 MGP_NODShiLtJ_G0028753.1 mouse_genomes_project 4 151395877 151412887 + Myom3 protein_coding retained_intron MGP_NODShiLtJ_T0068253.1 MGP_NODShiLtJ_G0028753.1 mouse_genomes_project 4 151398290 151403551 + Myom3 protein_coding retained_intron MGP_NODShiLtJ_T0069478.1 MGP_NODShiLtJ_G0029030.1 mouse_genomes_project 4 173649351 173654627 - MGP_NODShiLtJ_P0069478 Tmem88b protein_coding protein_coding MGP_NODShiLtJ_T0066366.1 MGP_NODShiLtJ_G0028344.1 mouse_genomes_project 4 120766899 120784886 - MGP_NODShiLtJ_P0066366 Dio1 protein_coding protein_coding MGP_NODShiLtJ_T0066367.1 MGP_NODShiLtJ_G0028344.1 mouse_genomes_project 4 120767601 120784859 - MGP_NODShiLtJ_P0066367 Dio1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066368.1 MGP_NODShiLtJ_G0028344.1 mouse_genomes_project 4 120767764 120784841 - MGP_NODShiLtJ_P0066368 Dio1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066369.1 MGP_NODShiLtJ_G0028344.1 mouse_genomes_project 4 120767768 120784841 - MGP_NODShiLtJ_P0066369 Dio1 protein_coding protein_coding MGP_NODShiLtJ_T0066370.1 MGP_NODShiLtJ_G0028344.1 mouse_genomes_project 4 120767798 120784835 - MGP_NODShiLtJ_P0066370 Dio1 protein_coding protein_coding MGP_NODShiLtJ_T0066371.1 MGP_NODShiLtJ_G0028344.1 mouse_genomes_project 4 120767798 120784835 - MGP_NODShiLtJ_P0066371 Dio1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066372.1 MGP_NODShiLtJ_G0028344.1 mouse_genomes_project 4 120767798 120784835 - MGP_NODShiLtJ_P0066372 Dio1 protein_coding protein_coding MGP_NODShiLtJ_T0066373.1 MGP_NODShiLtJ_G0028344.1 mouse_genomes_project 4 120776431 120784783 - Dio1 protein_coding processed_transcript MGP_NODShiLtJ_T0004428.1 MGP_NODShiLtJ_G0003849.1 mouse_genomes_project 4 111618940 111624552 + Kank4os antisense antisense MGP_NODShiLtJ_T0065374.1 MGP_NODShiLtJ_G0028099.1 mouse_genomes_project 4 58389760 58390720 + MGP_NODShiLtJ_P0065374 Olfr275 protein_coding protein_coding MGP_NODShiLtJ_T0101907.1 MGP_NODShiLtJ_G0040075.1 mouse_genomes_project 4 66133728 68067019 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0065311.1 MGP_NODShiLtJ_G0028080.1 mouse_genomes_project 4 52964053 52989137 + Invs protein_coding processed_transcript MGP_NODShiLtJ_T0065312.1 MGP_NODShiLtJ_G0028080.1 mouse_genomes_project 4 52964093 52965349 + Invs protein_coding processed_transcript MGP_NODShiLtJ_T0065313.1 MGP_NODShiLtJ_G0028080.1 mouse_genomes_project 4 52964095 53122882 + MGP_NODShiLtJ_P0065313 Invs protein_coding protein_coding MGP_NODShiLtJ_T0065314.1 MGP_NODShiLtJ_G0028080.1 mouse_genomes_project 4 52964109 52971135 + Invs protein_coding processed_transcript MGP_NODShiLtJ_T0065315.1 MGP_NODShiLtJ_G0028080.1 mouse_genomes_project 4 52964119 53118279 + MGP_NODShiLtJ_P0065315 Invs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065316.1 MGP_NODShiLtJ_G0028080.1 mouse_genomes_project 4 53070100 53085623 + Invs protein_coding processed_transcript MGP_NODShiLtJ_T0098035.1 MGP_NODShiLtJ_G0036447.1 mouse_genomes_project 4 92434139 92434250 + n-R5s187 rRNA rRNA MGP_NODShiLtJ_T0004471.1 MGP_NODShiLtJ_G0003883.1 mouse_genomes_project 4 138378436 138403731 - 1700121C08Rik antisense antisense MGP_NODShiLtJ_T0014704.1 MGP_NODShiLtJ_G0012812.1 mouse_genomes_project 4 164082583 164084291 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011460.1 MGP_NODShiLtJ_G0009593.1 mouse_genomes_project 4 78030995 78031301 - Gm26320 misc_RNA misc_RNA MGP_NODShiLtJ_T0065567.1 MGP_NODShiLtJ_G0028156.1 mouse_genomes_project 4 68715333 68748907 - Fkbp15 protein_coding processed_transcript MGP_NODShiLtJ_T0065568.1 MGP_NODShiLtJ_G0028156.1 mouse_genomes_project 4 68715333 68779099 - MGP_NODShiLtJ_P0065568 Fkbp15 protein_coding protein_coding MGP_NODShiLtJ_T0065569.1 MGP_NODShiLtJ_G0028156.1 mouse_genomes_project 4 68725668 68779177 - MGP_NODShiLtJ_P0065569 Fkbp15 protein_coding protein_coding MGP_NODShiLtJ_T0065570.1 MGP_NODShiLtJ_G0028156.1 mouse_genomes_project 4 68733022 68779123 - MGP_NODShiLtJ_P0065570 Fkbp15 protein_coding protein_coding MGP_NODShiLtJ_T0065571.1 MGP_NODShiLtJ_G0028156.1 mouse_genomes_project 4 68735038 68779163 - MGP_NODShiLtJ_P0065571 Fkbp15 protein_coding protein_coding MGP_NODShiLtJ_T0065572.1 MGP_NODShiLtJ_G0028156.1 mouse_genomes_project 4 68762825 68779098 - Fkbp15 protein_coding processed_transcript MGP_NODShiLtJ_T0099327.1 MGP_NODShiLtJ_G0037721.1 mouse_genomes_project 4 168441429 168441589 + Gm23405 snRNA snRNA MGP_NODShiLtJ_T0007799.1 MGP_NODShiLtJ_G0006370.1 mouse_genomes_project 4 69155303 69159325 - Gm11211 lincRNA lincRNA MGP_NODShiLtJ_T0099311.1 MGP_NODShiLtJ_G0037705.1 mouse_genomes_project 4 147745584 147745688 - Gm24762 snRNA snRNA MGP_NODShiLtJ_T0068687.1 MGP_NODShiLtJ_G0028856.1 mouse_genomes_project 4 157888147 157894515 - MGP_NODShiLtJ_P0068687 Tmem82 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068688.1 MGP_NODShiLtJ_G0028856.1 mouse_genomes_project 4 157889004 157892997 - MGP_NODShiLtJ_P0068688 Tmem82 protein_coding protein_coding MGP_NODShiLtJ_T0068689.1 MGP_NODShiLtJ_G0028856.1 mouse_genomes_project 4 157889008 157892740 - Tmem82 protein_coding retained_intron MGP_NODShiLtJ_T0101920.1 MGP_NODShiLtJ_G0040088.1 mouse_genomes_project 4 114944637 114944910 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004518.1 MGP_NODShiLtJ_G0003921.1 mouse_genomes_project 4 158297510 158301316 + Fhad1os1 antisense antisense MGP_NODShiLtJ_T0101902.1 MGP_NODShiLtJ_G0040070.1 mouse_genomes_project 4 405078 438864 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0066520.1 MGP_NODShiLtJ_G0028372.1 mouse_genomes_project 4 122495679 122566975 + MGP_NODShiLtJ_P0066520 Rab3b protein_coding protein_coding MGP_NODShiLtJ_T0066521.1 MGP_NODShiLtJ_G0028372.1 mouse_genomes_project 4 122495816 122564834 + MGP_NODShiLtJ_P0066521 Rab3b protein_coding protein_coding MGP_NODShiLtJ_T0066522.1 MGP_NODShiLtJ_G0028372.1 mouse_genomes_project 4 122506312 122564837 + MGP_NODShiLtJ_P0066522 Rab3b protein_coding protein_coding MGP_NODShiLtJ_T0066523.1 MGP_NODShiLtJ_G0028372.1 mouse_genomes_project 4 122562748 122564554 + Rab3b protein_coding processed_transcript MGP_NODShiLtJ_T0069243.1 MGP_NODShiLtJ_G0028989.1 mouse_genomes_project 4 171695886 171700575 + MGP_NODShiLtJ_P0069243 A430005L14Rik protein_coding protein_coding MGP_NODShiLtJ_T0069244.1 MGP_NODShiLtJ_G0028989.1 mouse_genomes_project 4 171695886 171700568 + MGP_NODShiLtJ_P0069244 A430005L14Rik protein_coding protein_coding MGP_NODShiLtJ_T0069245.1 MGP_NODShiLtJ_G0028989.1 mouse_genomes_project 4 171695904 171698716 + A430005L14Rik protein_coding retained_intron MGP_NODShiLtJ_T0069246.1 MGP_NODShiLtJ_G0028989.1 mouse_genomes_project 4 171695915 171700161 + MGP_NODShiLtJ_P0069246 A430005L14Rik protein_coding protein_coding MGP_NODShiLtJ_T0069247.1 MGP_NODShiLtJ_G0028989.1 mouse_genomes_project 4 171695915 171700453 + MGP_NODShiLtJ_P0069247 A430005L14Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069248.1 MGP_NODShiLtJ_G0028989.1 mouse_genomes_project 4 171695978 171699384 + A430005L14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0069249.1 MGP_NODShiLtJ_G0028989.1 mouse_genomes_project 4 171698441 171699739 + A430005L14Rik protein_coding retained_intron MGP_NODShiLtJ_T0066150.1 MGP_NODShiLtJ_G0028300.1 mouse_genomes_project 4 114432441 114487805 + MGP_NODShiLtJ_P0066150 Ak4 protein_coding protein_coding MGP_NODShiLtJ_T0066151.1 MGP_NODShiLtJ_G0028300.1 mouse_genomes_project 4 114432453 114487805 + MGP_NODShiLtJ_P0066151 Ak4 protein_coding protein_coding MGP_NODShiLtJ_T0066152.1 MGP_NODShiLtJ_G0028300.1 mouse_genomes_project 4 114432483 114487805 + MGP_NODShiLtJ_P0066152 Ak4 protein_coding protein_coding MGP_NODShiLtJ_T0066153.1 MGP_NODShiLtJ_G0028300.1 mouse_genomes_project 4 114432870 114478092 + MGP_NODShiLtJ_P0066153 Ak4 protein_coding protein_coding MGP_NODShiLtJ_T0066154.1 MGP_NODShiLtJ_G0028300.1 mouse_genomes_project 4 114432942 114483810 + MGP_NODShiLtJ_P0066154 Ak4 protein_coding protein_coding MGP_NODShiLtJ_T0066155.1 MGP_NODShiLtJ_G0028300.1 mouse_genomes_project 4 114433706 114484490 + Ak4 protein_coding processed_transcript MGP_NODShiLtJ_T0066156.1 MGP_NODShiLtJ_G0028300.1 mouse_genomes_project 4 114464720 114484589 + MGP_NODShiLtJ_P0066156 Ak4 protein_coding protein_coding MGP_NODShiLtJ_T0099291.1 MGP_NODShiLtJ_G0037685.1 mouse_genomes_project 4 122638382 122638487 - Gm23589 snRNA snRNA MGP_NODShiLtJ_T0007805.1 MGP_NODShiLtJ_G0006376.1 mouse_genomes_project 4 75632795 75641962 - Gm12911 lincRNA lincRNA MGP_NODShiLtJ_T0004551.1 MGP_NODShiLtJ_G0003946.1 mouse_genomes_project 4 172392215 172395221 + Gm13134 antisense antisense MGP_NODShiLtJ_T0004552.1 MGP_NODShiLtJ_G0003946.1 mouse_genomes_project 4 172392333 172393723 + Gm13134 antisense antisense MGP_NODShiLtJ_T0069285.1 MGP_NODShiLtJ_G0028996.1 mouse_genomes_project 4 171896639 171914637 + MGP_NODShiLtJ_P0069285 Wrap73 protein_coding protein_coding MGP_NODShiLtJ_T0069286.1 MGP_NODShiLtJ_G0028996.1 mouse_genomes_project 4 171896676 171914637 + Wrap73 protein_coding processed_transcript MGP_NODShiLtJ_T0069287.1 MGP_NODShiLtJ_G0028996.1 mouse_genomes_project 4 171909676 171913101 + MGP_NODShiLtJ_P0069287 Wrap73 protein_coding protein_coding MGP_NODShiLtJ_T0069288.1 MGP_NODShiLtJ_G0028996.1 mouse_genomes_project 4 171913035 171927338 + Wrap73 protein_coding processed_transcript MGP_NODShiLtJ_T0100554.1 MGP_NODShiLtJ_G0038948.1 mouse_genomes_project 4 83204818 83204956 + Gm26379 snoRNA snoRNA MGP_NODShiLtJ_T0014528.1 MGP_NODShiLtJ_G0012636.1 mouse_genomes_project 4 102915522 102916083 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007900.1 MGP_NODShiLtJ_G0006448.1 mouse_genomes_project 4 145016422 145019351 + E330017L17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007901.1 MGP_NODShiLtJ_G0006448.1 mouse_genomes_project 4 145016432 145019216 + E330017L17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007902.1 MGP_NODShiLtJ_G0006448.1 mouse_genomes_project 4 145016464 145018970 + E330017L17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007903.1 MGP_NODShiLtJ_G0006448.1 mouse_genomes_project 4 145016639 145033610 + E330017L17Rik lincRNA lincRNA MGP_NODShiLtJ_T0064943.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47619454 47666716 + MGP_NODShiLtJ_P0064943 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064944.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47619532 47654380 + MGP_NODShiLtJ_P0064944 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064945.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47619545 47655774 + Rusc2 protein_coding processed_transcript MGP_NODShiLtJ_T0064946.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47620917 47654424 + MGP_NODShiLtJ_P0064946 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064947.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47620978 47654339 + MGP_NODShiLtJ_P0064947 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064948.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47621757 47661541 + Rusc2 protein_coding processed_transcript MGP_NODShiLtJ_T0064949.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47621808 47654477 + MGP_NODShiLtJ_P0064949 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064950.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47638725 47666701 + Rusc2 protein_coding retained_intron MGP_NODShiLtJ_T0064951.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47638740 47654323 + MGP_NODShiLtJ_P0064951 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064952.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47643966 47666716 + MGP_NODShiLtJ_P0064952 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064953.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47644033 47662076 + Rusc2 protein_coding processed_transcript MGP_NODShiLtJ_T0064954.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47644088 47654763 + MGP_NODShiLtJ_P0064954 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064955.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47654279 47666716 + MGP_NODShiLtJ_P0064955 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064956.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47654279 47666264 + MGP_NODShiLtJ_P0064956 Rusc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064957.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47654303 47666720 + MGP_NODShiLtJ_P0064957 Rusc2 protein_coding protein_coding MGP_NODShiLtJ_T0064958.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47656021 47665980 + Rusc2 protein_coding processed_transcript MGP_NODShiLtJ_T0064959.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47662112 47663994 + Rusc2 protein_coding retained_intron MGP_NODShiLtJ_T0064960.1 MGP_NODShiLtJ_G0028007.1 mouse_genomes_project 4 47663211 47663632 + Rusc2 protein_coding retained_intron MGP_NODShiLtJ_T0100551.1 MGP_NODShiLtJ_G0038945.1 mouse_genomes_project 4 81005484 81005622 - Gm25653 snoRNA snoRNA MGP_NODShiLtJ_T0014506.1 MGP_NODShiLtJ_G0012614.1 mouse_genomes_project 4 93803464 93805252 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065662.1 MGP_NODShiLtJ_G0028178.1 mouse_genomes_project 4 70073260 70085030 + MGP_NODShiLtJ_P0065662 Atp6v1g1 protein_coding protein_coding MGP_NODShiLtJ_T0004484.1 MGP_NODShiLtJ_G0003894.1 mouse_genomes_project 4 145142622 145165989 - Gm12963 antisense antisense MGP_NODShiLtJ_T0004485.1 MGP_NODShiLtJ_G0003894.1 mouse_genomes_project 4 145145221 145165989 - Gm12963 antisense antisense MGP_NODShiLtJ_T0004486.1 MGP_NODShiLtJ_G0003894.1 mouse_genomes_project 4 145145225 145146852 - Gm12963 antisense antisense MGP_NODShiLtJ_T0068361.1 MGP_NODShiLtJ_G0028779.1 mouse_genomes_project 4 152596502 152599389 - MGP_NODShiLtJ_P0068361 C1qa protein_coding protein_coding MGP_NODShiLtJ_T0064982.1 MGP_NODShiLtJ_G0028011.1 mouse_genomes_project 4 47731755 47733409 - MGP_NODShiLtJ_P0064982 Sit1 protein_coding protein_coding MGP_NODShiLtJ_T0064983.1 MGP_NODShiLtJ_G0028011.1 mouse_genomes_project 4 47731861 47732897 - Sit1 protein_coding processed_transcript MGP_NODShiLtJ_T0064851.1 MGP_NODShiLtJ_G0027991.1 mouse_genomes_project 4 46424317 46425447 + MGP_NODShiLtJ_P0064851 protein_coding protein_coding MGP_NODShiLtJ_T0014636.1 MGP_NODShiLtJ_G0012744.1 mouse_genomes_project 4 138147116 138147525 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100566.1 MGP_NODShiLtJ_G0038960.1 mouse_genomes_project 4 116796509 116796638 - Gm25877 snoRNA snoRNA MGP_NODShiLtJ_T0065847.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 96902458 96938925 + Adamtsl1 protein_coding retained_intron MGP_NODShiLtJ_T0065848.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 96902458 97298128 + MGP_NODShiLtJ_P0065848 Adamtsl1 protein_coding protein_coding MGP_NODShiLtJ_T0065849.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 96902466 97116332 + MGP_NODShiLtJ_P0065849 Adamtsl1 protein_coding protein_coding MGP_NODShiLtJ_T0065850.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 96902471 97298131 + MGP_NODShiLtJ_P0065850 Adamtsl1 protein_coding protein_coding MGP_NODShiLtJ_T0065851.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 96902518 97062581 + MGP_NODShiLtJ_P0065851 Adamtsl1 protein_coding protein_coding MGP_NODShiLtJ_T0065852.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 96902563 97096876 + Adamtsl1 protein_coding retained_intron MGP_NODShiLtJ_T0065853.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 96938762 96965482 + Adamtsl1 protein_coding retained_intron MGP_NODShiLtJ_T0065854.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 97062202 97110524 + MGP_NODShiLtJ_P0065854 Adamtsl1 protein_coding protein_coding MGP_NODShiLtJ_T0065855.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 97140014 97140628 + Adamtsl1 protein_coding processed_transcript MGP_NODShiLtJ_T0065856.1 MGP_NODShiLtJ_G0028218.1 mouse_genomes_project 4 97140291 97298128 + Adamtsl1 protein_coding retained_intron MGP_NODShiLtJ_T0068551.1 MGP_NODShiLtJ_G0028824.1 mouse_genomes_project 4 155636053 155699257 + MGP_NODShiLtJ_P0068551 Gm21969 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007741.1 MGP_NODShiLtJ_G0006320.1 mouse_genomes_project 4 9523887 9531682 + Gm26895 lincRNA lincRNA MGP_NODShiLtJ_T0014414.1 MGP_NODShiLtJ_G0012522.1 mouse_genomes_project 4 54130043 54215620 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067384.1 MGP_NODShiLtJ_G0028571.1 mouse_genomes_project 4 140792241 140820366 + MGP_NODShiLtJ_P0067384 Csf3r protein_coding protein_coding MGP_NODShiLtJ_T0067385.1 MGP_NODShiLtJ_G0028571.1 mouse_genomes_project 4 140792383 140816240 + MGP_NODShiLtJ_P0067385 Csf3r protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067386.1 MGP_NODShiLtJ_G0028571.1 mouse_genomes_project 4 140792417 140800761 + Csf3r protein_coding processed_transcript MGP_NODShiLtJ_T0067387.1 MGP_NODShiLtJ_G0028571.1 mouse_genomes_project 4 140794983 140820365 + MGP_NODShiLtJ_P0067387 Csf3r protein_coding protein_coding MGP_NODShiLtJ_T0067388.1 MGP_NODShiLtJ_G0028571.1 mouse_genomes_project 4 140807007 140815659 + Csf3r protein_coding processed_transcript MGP_NODShiLtJ_T0007804.1 MGP_NODShiLtJ_G0006375.1 mouse_genomes_project 4 75246143 75402932 + lincRNA lincRNA MGP_NODShiLtJ_T0066710.1 MGP_NODShiLtJ_G0028413.1 mouse_genomes_project 4 129457683 129458868 - MGP_NODShiLtJ_P0066710 Tex38 protein_coding protein_coding MGP_NODShiLtJ_T0068881.1 MGP_NODShiLtJ_G0028926.1 mouse_genomes_project 4 165374527 165422099 - MGP_NODShiLtJ_P0068881 Ptchd2 protein_coding protein_coding MGP_NODShiLtJ_T0068882.1 MGP_NODShiLtJ_G0028926.1 mouse_genomes_project 4 165392455 165395084 - Ptchd2 protein_coding retained_intron MGP_NODShiLtJ_T0068883.1 MGP_NODShiLtJ_G0028926.1 mouse_genomes_project 4 165394123 165395564 - Ptchd2 protein_coding processed_transcript MGP_NODShiLtJ_T0065304.1 MGP_NODShiLtJ_G0028078.1 mouse_genomes_project 4 52785858 52846135 + MGP_NODShiLtJ_P0065304 Stx17 protein_coding protein_coding MGP_NODShiLtJ_T0065305.1 MGP_NODShiLtJ_G0028078.1 mouse_genomes_project 4 52785866 52822688 + MGP_NODShiLtJ_P0065305 Stx17 protein_coding protein_coding MGP_NODShiLtJ_T0065306.1 MGP_NODShiLtJ_G0028078.1 mouse_genomes_project 4 52785869 52846731 + MGP_NODShiLtJ_P0065306 Stx17 protein_coding protein_coding MGP_NODShiLtJ_T0065307.1 MGP_NODShiLtJ_G0028078.1 mouse_genomes_project 4 52785878 52842455 + MGP_NODShiLtJ_P0065307 Stx17 protein_coding protein_coding MGP_NODShiLtJ_T0004539.1 MGP_NODShiLtJ_G0003935.1 mouse_genomes_project 4 166764727 166769575 + antisense antisense MGP_NODShiLtJ_T0068768.1 MGP_NODShiLtJ_G0028887.1 mouse_genomes_project 4 160571388 160572623 - MGP_NODShiLtJ_P0068768 protein_coding protein_coding MGP_NODShiLtJ_T0014404.1 MGP_NODShiLtJ_G0012512.1 mouse_genomes_project 4 50734836 50735713 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004386.1 MGP_NODShiLtJ_G0003819.1 mouse_genomes_project 4 47847619 47873829 + Gm12472 antisense antisense MGP_NODShiLtJ_T0004434.1 MGP_NODShiLtJ_G0003855.1 mouse_genomes_project 4 119968151 119971401 - 2700068H02Rik antisense antisense MGP_NODShiLtJ_T0010521.1 MGP_NODShiLtJ_G0008654.1 mouse_genomes_project 4 144639856 144639985 - Mir8119 miRNA miRNA MGP_NODShiLtJ_T0069087.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168388994 169385904 - MGP_NODShiLtJ_P0069087 Camta1 protein_coding protein_coding MGP_NODShiLtJ_T0069104.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168542505 169386111 - MGP_NODShiLtJ_P0069104 Camta1 protein_coding protein_coding MGP_NODShiLtJ_T0069105.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168542506 169385981 - MGP_NODShiLtJ_P0069105 Camta1 protein_coding protein_coding MGP_NODShiLtJ_T0069106.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168542506 168562790 - MGP_NODShiLtJ_P0069106 Camta1 protein_coding protein_coding MGP_NODShiLtJ_T0069107.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168542794 168591960 - MGP_NODShiLtJ_P0069107 Camta1 protein_coding protein_coding MGP_NODShiLtJ_T0069108.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168542794 168613734 - MGP_NODShiLtJ_P0069108 Camta1 protein_coding protein_coding MGP_NODShiLtJ_T0069109.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168569058 168623797 - Camta1 protein_coding processed_transcript MGP_NODShiLtJ_T0069110.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168569143 168591687 - MGP_NODShiLtJ_P0069110 Camta1 protein_coding protein_coding MGP_NODShiLtJ_T0069112.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 168978380 169385885 - Camta1 protein_coding processed_transcript MGP_NODShiLtJ_T0069113.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 169312275 169385939 - Camta1 protein_coding processed_transcript MGP_NODShiLtJ_T0069114.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 169313939 169385973 - Camta1 protein_coding processed_transcript MGP_NODShiLtJ_T0069115.1 MGP_NODShiLtJ_G0028963.1 mouse_genomes_project 4 169314203 169385904 - MGP_NODShiLtJ_P0069115 Camta1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0014699.1 MGP_NODShiLtJ_G0012807.1 mouse_genomes_project 4 161266228 161270077 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101904.1 MGP_NODShiLtJ_G0040072.1 mouse_genomes_project 4 48059816 48062275 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014554.1 MGP_NODShiLtJ_G0012662.1 mouse_genomes_project 4 113526963 113527895 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064773.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45272504 45362368 - MGP_NODShiLtJ_P0064773 Ubap2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064774.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45272512 45362378 - MGP_NODShiLtJ_P0064774 Ubap2 protein_coding protein_coding MGP_NODShiLtJ_T0064775.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45272515 45362369 - MGP_NODShiLtJ_P0064775 Ubap2 protein_coding protein_coding MGP_NODShiLtJ_T0064776.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45273374 45276242 - MGP_NODShiLtJ_P0064776 Ubap2 protein_coding protein_coding MGP_NODShiLtJ_T0064777.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45281776 45282636 - Ubap2 protein_coding processed_transcript MGP_NODShiLtJ_T0064778.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45289452 45296389 - MGP_NODShiLtJ_P0064778 Ubap2 protein_coding protein_coding MGP_NODShiLtJ_T0064779.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45305005 45336339 - MGP_NODShiLtJ_P0064779 Ubap2 protein_coding protein_coding MGP_NODShiLtJ_T0064780.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45305008 45362350 - Ubap2 protein_coding processed_transcript MGP_NODShiLtJ_T0064781.1 MGP_NODShiLtJ_G0027971.1 mouse_genomes_project 4 45361299 45362361 - Ubap2 protein_coding processed_transcript MGP_NODShiLtJ_T0067952.1 MGP_NODShiLtJ_G0028684.1 mouse_genomes_project 4 148011435 148029122 - MGP_NODShiLtJ_P0067952 Themis2 protein_coding protein_coding MGP_NODShiLtJ_T0065982.1 MGP_NODShiLtJ_G0028262.1 mouse_genomes_project 4 107367068 107389104 - MGP_NODShiLtJ_P0065982 Eqtn protein_coding protein_coding MGP_NODShiLtJ_T0065983.1 MGP_NODShiLtJ_G0028262.1 mouse_genomes_project 4 107367232 107389055 - MGP_NODShiLtJ_P0065983 Eqtn protein_coding protein_coding MGP_NODShiLtJ_T0014429.1 MGP_NODShiLtJ_G0012537.1 mouse_genomes_project 4 58919640 58920087 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099323.1 MGP_NODShiLtJ_G0037717.1 mouse_genomes_project 4 165698172 165698276 + Gm24002 snRNA snRNA MGP_NODShiLtJ_T0068823.1 MGP_NODShiLtJ_G0028912.1 mouse_genomes_project 4 164933492 164934802 + MGP_NODShiLtJ_P0068823 Fv1 protein_coding protein_coding MGP_NODShiLtJ_T0014378.1 MGP_NODShiLtJ_G0012486.1 mouse_genomes_project 4 40413130 40413598 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101908.1 MGP_NODShiLtJ_G0040076.1 mouse_genomes_project 4 68383844 68385973 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004507.1 MGP_NODShiLtJ_G0003912.1 mouse_genomes_project 4 156240572 156242043 + Gm13027 antisense antisense MGP_NODShiLtJ_T0098159.1 MGP_NODShiLtJ_G0036571.1 mouse_genomes_project 4 47745974 47746245 - Rmrp ribozyme ribozyme MGP_NODShiLtJ_T0066808.1 MGP_NODShiLtJ_G0028432.1 mouse_genomes_project 4 130288452 130292696 - MGP_NODShiLtJ_P0066808 Tmem69 protein_coding protein_coding MGP_NODShiLtJ_T0066809.1 MGP_NODShiLtJ_G0028432.1 mouse_genomes_project 4 130289714 130292695 - MGP_NODShiLtJ_P0066809 Tmem69 protein_coding protein_coding MGP_NODShiLtJ_T0066036.1 MGP_NODShiLtJ_G0028275.1 mouse_genomes_project 4 109352883 109423586 - MGP_NODShiLtJ_P0066036 Gm12695 protein_coding protein_coding MGP_NODShiLtJ_T0065750.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91709933 91875800 - MGP_NODShiLtJ_P0065750 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065751.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91709938 91769550 - MGP_NODShiLtJ_P0065751 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065752.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91709938 91875802 - MGP_NODShiLtJ_P0065752 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065753.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91709949 91875711 - MGP_NODShiLtJ_P0065753 Mpdz protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065754.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91710668 91717873 - Mpdz protein_coding retained_intron MGP_NODShiLtJ_T0065755.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91710771 91727928 - MGP_NODShiLtJ_P0065755 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065756.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91715324 91717034 - Mpdz protein_coding retained_intron MGP_NODShiLtJ_T0065757.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91715708 91724956 - MGP_NODShiLtJ_P0065757 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065758.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91716911 91720406 - Mpdz protein_coding retained_intron MGP_NODShiLtJ_T0065759.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91722222 91725173 - Mpdz protein_coding retained_intron MGP_NODShiLtJ_T0065760.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91724902 91725518 - Mpdz protein_coding retained_intron MGP_NODShiLtJ_T0065761.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91740051 91753775 - MGP_NODShiLtJ_P0065761 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065762.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91753597 91766719 - MGP_NODShiLtJ_P0065762 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065763.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91753619 91769508 - MGP_NODShiLtJ_P0065763 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065764.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91781927 91798323 - MGP_NODShiLtJ_P0065764 Mpdz protein_coding protein_coding MGP_NODShiLtJ_T0065765.1 MGP_NODShiLtJ_G0028206.1 mouse_genomes_project 4 91848746 91875810 - Mpdz protein_coding retained_intron MGP_NODShiLtJ_T0068480.1 MGP_NODShiLtJ_G0028807.1 mouse_genomes_project 4 154745835 154752199 + MGP_NODShiLtJ_P0068480 Pla2g2d protein_coding protein_coding MGP_NODShiLtJ_T0068481.1 MGP_NODShiLtJ_G0028807.1 mouse_genomes_project 4 154747994 154751226 + MGP_NODShiLtJ_P0068481 Pla2g2d protein_coding protein_coding MGP_NODShiLtJ_T0014624.1 MGP_NODShiLtJ_G0012732.1 mouse_genomes_project 4 135296927 135298876 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014667.1 MGP_NODShiLtJ_G0012775.1 mouse_genomes_project 4 149831923 149832184 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007958.1 MGP_NODShiLtJ_G0006490.1 mouse_genomes_project 4 167383405 167391341 + Gm13067 lincRNA lincRNA MGP_NODShiLtJ_T0007954.1 MGP_NODShiLtJ_G0006486.1 mouse_genomes_project 4 165488990 165492085 - Gm13200 lincRNA lincRNA MGP_NODShiLtJ_T0068709.1 MGP_NODShiLtJ_G0028864.1 mouse_genomes_project 4 158105340 158109586 - Cela2a protein_coding retained_intron MGP_NODShiLtJ_T0068710.1 MGP_NODShiLtJ_G0028864.1 mouse_genomes_project 4 158105340 158116514 - MGP_NODShiLtJ_P0068710 Cela2a protein_coding protein_coding MGP_NODShiLtJ_T0068712.1 MGP_NODShiLtJ_G0028864.1 mouse_genomes_project 4 158115305 158116355 - Cela2a protein_coding retained_intron MGP_NODShiLtJ_T0007967.1 MGP_NODShiLtJ_G0006499.1 mouse_genomes_project 4 172639512 172641032 + lincRNA lincRNA MGP_NODShiLtJ_T0064473.1 MGP_NODShiLtJ_G0027899.1 mouse_genomes_project 4 19135656 19184045 - MGP_NODShiLtJ_P0064473 Atp6v0d2 protein_coding protein_coding MGP_NODShiLtJ_T0064474.1 MGP_NODShiLtJ_G0027899.1 mouse_genomes_project 4 19149662 19178380 - MGP_NODShiLtJ_P0064474 Atp6v0d2 protein_coding protein_coding MGP_NODShiLtJ_T0064622.1 MGP_NODShiLtJ_G0027932.1 mouse_genomes_project 4 35443764 35477357 + MGP_NODShiLtJ_P0064622 Gabrr1 protein_coding protein_coding MGP_NODShiLtJ_T0010515.1 MGP_NODShiLtJ_G0008648.1 mouse_genomes_project 4 135125658 135125722 - Mir7015 miRNA miRNA MGP_NODShiLtJ_T0066253.1 MGP_NODShiLtJ_G0028318.1 mouse_genomes_project 4 118091547 118126726 - C8a protein_coding processed_transcript MGP_NODShiLtJ_T0066254.1 MGP_NODShiLtJ_G0028318.1 mouse_genomes_project 4 118091547 118146558 - MGP_NODShiLtJ_P0066254 C8a protein_coding protein_coding MGP_NODShiLtJ_T0066255.1 MGP_NODShiLtJ_G0028318.1 mouse_genomes_project 4 118091549 118146516 - MGP_NODShiLtJ_P0066255 C8a protein_coding protein_coding MGP_NODShiLtJ_T0064900.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47251023 47255039 - MGP_NODShiLtJ_P0064900 Stoml2 protein_coding protein_coding MGP_NODShiLtJ_T0064901.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47251359 47253167 - Stoml2 protein_coding processed_transcript MGP_NODShiLtJ_T0064902.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47251375 47253244 - Stoml2 protein_coding processed_transcript MGP_NODShiLtJ_T0064903.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47251562 47254785 - MGP_NODShiLtJ_P0064903 Stoml2 protein_coding protein_coding MGP_NODShiLtJ_T0064904.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47251574 47253923 - MGP_NODShiLtJ_P0064904 Stoml2 protein_coding protein_coding MGP_NODShiLtJ_T0064905.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47252893 47254779 - Stoml2 protein_coding processed_transcript MGP_NODShiLtJ_T0064906.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47252926 47254699 - MGP_NODShiLtJ_P0064906 Stoml2 protein_coding protein_coding MGP_NODShiLtJ_T0064907.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47252944 47253829 - Stoml2 protein_coding processed_transcript MGP_NODShiLtJ_T0064908.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47253102 47253930 - Stoml2 protein_coding processed_transcript MGP_NODShiLtJ_T0064909.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47253370 47254687 - Stoml2 protein_coding processed_transcript MGP_NODShiLtJ_T0064910.1 MGP_NODShiLtJ_G0028003.1 mouse_genomes_project 4 47253822 47254765 - Stoml2 protein_coding processed_transcript MGP_NODShiLtJ_T0099318.1 MGP_NODShiLtJ_G0037712.1 mouse_genomes_project 4 154539980 154540086 - Gm22961 snRNA snRNA MGP_NODShiLtJ_T0065419.1 MGP_NODShiLtJ_G0028113.1 mouse_genomes_project 4 61304248 61310895 - MGP_NODShiLtJ_P0065419 Klf4 protein_coding protein_coding MGP_NODShiLtJ_T0065420.1 MGP_NODShiLtJ_G0028113.1 mouse_genomes_project 4 61309122 61310290 - MGP_NODShiLtJ_P0065420 Klf4 protein_coding protein_coding MGP_NODShiLtJ_T0065421.1 MGP_NODShiLtJ_G0028113.1 mouse_genomes_project 4 61309231 61312164 - MGP_NODShiLtJ_P0065421 Klf4 protein_coding protein_coding MGP_NODShiLtJ_T0069366.1 MGP_NODShiLtJ_G0029011.1 mouse_genomes_project 4 172873683 172886765 - Rer1 protein_coding processed_transcript MGP_NODShiLtJ_T0069367.1 MGP_NODShiLtJ_G0029011.1 mouse_genomes_project 4 172874512 172886780 - MGP_NODShiLtJ_P0069367 Rer1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069368.1 MGP_NODShiLtJ_G0029011.1 mouse_genomes_project 4 172883078 172886776 - Rer1 protein_coding processed_transcript MGP_NODShiLtJ_T0007875.1 MGP_NODShiLtJ_G0006433.1 mouse_genomes_project 4 138963540 138969680 - 4933435F18Rik lincRNA lincRNA MGP_NODShiLtJ_T0007876.1 MGP_NODShiLtJ_G0006433.1 mouse_genomes_project 4 138968577 138969639 - 4933435F18Rik lincRNA lincRNA MGP_NODShiLtJ_T0007881.1 MGP_NODShiLtJ_G0006435.1 mouse_genomes_project 4 139223218 139228634 + 4933407E24Rik lincRNA lincRNA MGP_NODShiLtJ_T0014721.1 MGP_NODShiLtJ_G0012829.1 mouse_genomes_project 4 171987172 171988618 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067502.1 MGP_NODShiLtJ_G0028595.1 mouse_genomes_project 4 141916999 141936246 - MGP_NODShiLtJ_P0067502 Zmym1 protein_coding protein_coding MGP_NODShiLtJ_T0067503.1 MGP_NODShiLtJ_G0028595.1 mouse_genomes_project 4 141917498 141934080 - MGP_NODShiLtJ_P0067503 Zmym1 protein_coding protein_coding MGP_NODShiLtJ_T0067504.1 MGP_NODShiLtJ_G0028595.1 mouse_genomes_project 4 141917547 141936154 - Zmym1 protein_coding processed_transcript MGP_NODShiLtJ_T0067505.1 MGP_NODShiLtJ_G0028595.1 mouse_genomes_project 4 141917547 141936218 - MGP_NODShiLtJ_P0067505 Zmym1 protein_coding protein_coding MGP_NODShiLtJ_T0067506.1 MGP_NODShiLtJ_G0028595.1 mouse_genomes_project 4 141918570 141933975 - Zmym1 protein_coding processed_transcript MGP_NODShiLtJ_T0067507.1 MGP_NODShiLtJ_G0028595.1 mouse_genomes_project 4 141924190 141932668 - Zmym1 protein_coding processed_transcript MGP_NODShiLtJ_T0067508.1 MGP_NODShiLtJ_G0028595.1 mouse_genomes_project 4 141924229 141936180 - MGP_NODShiLtJ_P0067508 Zmym1 protein_coding protein_coding MGP_NODShiLtJ_T0004483.1 MGP_NODShiLtJ_G0003893.1 mouse_genomes_project 4 144573015 144590766 - Gm12979 antisense antisense MGP_NODShiLtJ_T0010516.1 MGP_NODShiLtJ_G0008649.1 mouse_genomes_project 4 138131087 138131189 + Mir6398 miRNA miRNA MGP_NODShiLtJ_T0010486.1 MGP_NODShiLtJ_G0008619.1 mouse_genomes_project 4 48541301 48541374 - Mir5106 miRNA miRNA MGP_NODShiLtJ_T0017915.1 MGP_NODShiLtJ_G0015423.1 mouse_genomes_project 4 106868080 106885312 - Gm12655 processed_transcript processed_transcript MGP_NODShiLtJ_T0017916.1 MGP_NODShiLtJ_G0015423.1 mouse_genomes_project 4 106869156 106885299 - Gm12655 processed_transcript processed_transcript MGP_NODShiLtJ_T0014516.1 MGP_NODShiLtJ_G0012624.1 mouse_genomes_project 4 97732774 97733558 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067323.1 MGP_NODShiLtJ_G0028553.1 mouse_genomes_project 4 139316281 139320130 + MGP_NODShiLtJ_P0067323 Pou3f1 protein_coding protein_coding MGP_NODShiLtJ_T0014622.1 MGP_NODShiLtJ_G0012730.1 mouse_genomes_project 4 135285541 135286267 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007795.1 MGP_NODShiLtJ_G0006366.1 mouse_genomes_project 4 64150311 64179443 + Gm26889 lincRNA lincRNA MGP_NODShiLtJ_T0014502.1 MGP_NODShiLtJ_G0012610.1 mouse_genomes_project 4 91888891 91895569 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099266.1 MGP_NODShiLtJ_G0037660.1 mouse_genomes_project 4 63722041 63722145 + Gm24277 snRNA snRNA MGP_NODShiLtJ_T0065573.1 MGP_NODShiLtJ_G0028157.1 mouse_genomes_project 4 68779355 68813122 + MGP_NODShiLtJ_P0065573 Slc31a1 protein_coding protein_coding MGP_NODShiLtJ_T0065575.1 MGP_NODShiLtJ_G0028157.1 mouse_genomes_project 4 68806840 68813122 + MGP_NODShiLtJ_P0065575 Slc31a1 protein_coding protein_coding MGP_NODShiLtJ_T0068105.1 MGP_NODShiLtJ_G0028717.1 mouse_genomes_project 4 149585302 149660313 - MGP_NODShiLtJ_P0068105 Cep85 protein_coding protein_coding MGP_NODShiLtJ_T0068106.1 MGP_NODShiLtJ_G0028717.1 mouse_genomes_project 4 149585310 149660182 - MGP_NODShiLtJ_P0068106 Cep85 protein_coding protein_coding MGP_NODShiLtJ_T0068107.1 MGP_NODShiLtJ_G0028717.1 mouse_genomes_project 4 149586539 149589876 - Cep85 protein_coding processed_transcript MGP_NODShiLtJ_T0068108.1 MGP_NODShiLtJ_G0028717.1 mouse_genomes_project 4 149589465 149596500 - Cep85 protein_coding retained_intron MGP_NODShiLtJ_T0068109.1 MGP_NODShiLtJ_G0028717.1 mouse_genomes_project 4 149630306 149632520 - Cep85 protein_coding retained_intron MGP_NODShiLtJ_T0068110.1 MGP_NODShiLtJ_G0028717.1 mouse_genomes_project 4 149633938 149634961 - Cep85 protein_coding processed_transcript MGP_NODShiLtJ_T0068111.1 MGP_NODShiLtJ_G0028717.1 mouse_genomes_project 4 149634134 149660286 - MGP_NODShiLtJ_P0068111 Cep85 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068112.1 MGP_NODShiLtJ_G0028717.1 mouse_genomes_project 4 149645927 149660252 - Cep85 protein_coding retained_intron MGP_NODShiLtJ_T0017938.1 MGP_NODShiLtJ_G0015441.1 mouse_genomes_project 4 139621793 139623384 + 9930104L06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017939.1 MGP_NODShiLtJ_G0015441.1 mouse_genomes_project 4 139621803 139624200 + 9930104L06Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017940.1 MGP_NODShiLtJ_G0015441.1 mouse_genomes_project 4 139621807 139630376 + 9930104L06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017941.1 MGP_NODShiLtJ_G0015441.1 mouse_genomes_project 4 139621810 139632599 + 9930104L06Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017942.1 MGP_NODShiLtJ_G0015441.1 mouse_genomes_project 4 139621819 139632600 + 9930104L06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017943.1 MGP_NODShiLtJ_G0015441.1 mouse_genomes_project 4 139623523 139630525 + 9930104L06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017944.1 MGP_NODShiLtJ_G0015441.1 mouse_genomes_project 4 139631074 139631808 + 9930104L06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0068790.1 MGP_NODShiLtJ_G0028902.1 mouse_genomes_project 4 161379129 161396044 - MGP_NODShiLtJ_P0068790 Gm436 protein_coding protein_coding MGP_NODShiLtJ_T0068289.1 MGP_NODShiLtJ_G0028761.1 mouse_genomes_project 4 151599035 151610032 - MGP_NODShiLtJ_P0068289 Pithd1 protein_coding protein_coding MGP_NODShiLtJ_T0068290.1 MGP_NODShiLtJ_G0028761.1 mouse_genomes_project 4 151599641 151608704 - Pithd1 protein_coding processed_transcript MGP_NODShiLtJ_T0068291.1 MGP_NODShiLtJ_G0028761.1 mouse_genomes_project 4 151599969 151602486 - Pithd1 protein_coding retained_intron MGP_NODShiLtJ_T0068292.1 MGP_NODShiLtJ_G0028761.1 mouse_genomes_project 4 151599971 151609090 - MGP_NODShiLtJ_P0068292 Pithd1 protein_coding protein_coding MGP_NODShiLtJ_T0068293.1 MGP_NODShiLtJ_G0028761.1 mouse_genomes_project 4 151600782 151609685 - MGP_NODShiLtJ_P0068293 Pithd1 protein_coding protein_coding MGP_NODShiLtJ_T0068294.1 MGP_NODShiLtJ_G0028761.1 mouse_genomes_project 4 151601913 151609849 - Pithd1 protein_coding retained_intron MGP_NODShiLtJ_T0068295.1 MGP_NODShiLtJ_G0028761.1 mouse_genomes_project 4 151609181 151609855 - Pithd1 protein_coding processed_transcript MGP_NODShiLtJ_T0066129.1 MGP_NODShiLtJ_G0028293.1 mouse_genomes_project 4 112843224 112904344 + MGP_NODShiLtJ_P0066129 Pgm2 protein_coding protein_coding MGP_NODShiLtJ_T0066130.1 MGP_NODShiLtJ_G0028293.1 mouse_genomes_project 4 112869584 112904344 + MGP_NODShiLtJ_P0066130 Pgm2 protein_coding protein_coding MGP_NODShiLtJ_T0068772.1 MGP_NODShiLtJ_G0028890.1 mouse_genomes_project 4 160766826 160771926 - MGP_NODShiLtJ_P0068772 Oog3 protein_coding protein_coding MGP_NODShiLtJ_T0068643.1 MGP_NODShiLtJ_G0028847.1 mouse_genomes_project 4 157550754 157582148 + MGP_NODShiLtJ_P0068643 Epha2 protein_coding protein_coding MGP_NODShiLtJ_T0068644.1 MGP_NODShiLtJ_G0028847.1 mouse_genomes_project 4 157551924 157558303 + Epha2 protein_coding processed_transcript MGP_NODShiLtJ_T0068645.1 MGP_NODShiLtJ_G0028847.1 mouse_genomes_project 4 157558462 157562071 + Epha2 protein_coding processed_transcript MGP_NODShiLtJ_T0068646.1 MGP_NODShiLtJ_G0028847.1 mouse_genomes_project 4 157568043 157573709 + Epha2 protein_coding processed_transcript MGP_NODShiLtJ_T0065878.1 MGP_NODShiLtJ_G0028224.1 mouse_genomes_project 4 97771891 97776643 - MGP_NODShiLtJ_P0065878 Rps6 protein_coding protein_coding MGP_NODShiLtJ_T0065879.1 MGP_NODShiLtJ_G0028224.1 mouse_genomes_project 4 97772195 97776557 - MGP_NODShiLtJ_P0065879 Rps6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065880.1 MGP_NODShiLtJ_G0028224.1 mouse_genomes_project 4 97772979 97776576 - Rps6 protein_coding processed_transcript MGP_NODShiLtJ_T0065881.1 MGP_NODShiLtJ_G0028224.1 mouse_genomes_project 4 97773905 97776585 - Rps6 protein_coding processed_transcript MGP_NODShiLtJ_T0065882.1 MGP_NODShiLtJ_G0028224.1 mouse_genomes_project 4 97774015 97776563 - Rps6 protein_coding processed_transcript MGP_NODShiLtJ_T0014552.1 MGP_NODShiLtJ_G0012660.1 mouse_genomes_project 4 112554817 112555523 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014468.1 MGP_NODShiLtJ_G0012576.1 mouse_genomes_project 4 77651424 77652489 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014490.1 MGP_NODShiLtJ_G0012598.1 mouse_genomes_project 4 85690610 85693067 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064261.1 MGP_NODShiLtJ_G0027846.1 mouse_genomes_project 4 1563293 1595586 - MGP_NODShiLtJ_P0064261 Impad1 protein_coding protein_coding MGP_NODShiLtJ_T0010485.1 MGP_NODShiLtJ_G0008618.1 mouse_genomes_project 4 47902778 47902911 + Gm25262 miRNA miRNA MGP_NODShiLtJ_T0068580.1 MGP_NODShiLtJ_G0028833.1 mouse_genomes_project 4 156932553 156965357 - MGP_NODShiLtJ_P0068580 Padi4 protein_coding protein_coding MGP_NODShiLtJ_T0068581.1 MGP_NODShiLtJ_G0028833.1 mouse_genomes_project 4 156940949 156947192 - Padi4 protein_coding processed_transcript MGP_NODShiLtJ_T0068582.1 MGP_NODShiLtJ_G0028833.1 mouse_genomes_project 4 156945175 156951961 - Padi4 protein_coding processed_transcript MGP_NODShiLtJ_T0068583.1 MGP_NODShiLtJ_G0028833.1 mouse_genomes_project 4 156947360 156951954 - Padi4 protein_coding processed_transcript MGP_NODShiLtJ_T0014305.1 MGP_NODShiLtJ_G0012413.1 mouse_genomes_project 4 14512796 14514016 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101913.1 MGP_NODShiLtJ_G0040081.1 mouse_genomes_project 4 99742679 99743246 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0068409.1 MGP_NODShiLtJ_G0028791.1 mouse_genomes_project 4 153529251 153610966 - MGP_NODShiLtJ_P0068409 Alpl protein_coding protein_coding MGP_NODShiLtJ_T0068410.1 MGP_NODShiLtJ_G0028791.1 mouse_genomes_project 4 153533938 153534666 - Alpl protein_coding processed_transcript MGP_NODShiLtJ_T0068411.1 MGP_NODShiLtJ_G0028791.1 mouse_genomes_project 4 153540076 153561747 - MGP_NODShiLtJ_P0068411 Alpl protein_coding protein_coding MGP_NODShiLtJ_T0068412.1 MGP_NODShiLtJ_G0028791.1 mouse_genomes_project 4 153541391 153579112 - MGP_NODShiLtJ_P0068412 Alpl protein_coding protein_coding MGP_NODShiLtJ_T0068413.1 MGP_NODShiLtJ_G0028791.1 mouse_genomes_project 4 153543592 153582292 - MGP_NODShiLtJ_P0068413 Alpl protein_coding protein_coding MGP_NODShiLtJ_T0068414.1 MGP_NODShiLtJ_G0028791.1 mouse_genomes_project 4 153544136 153610812 - Alpl protein_coding processed_transcript MGP_NODShiLtJ_T0068415.1 MGP_NODShiLtJ_G0028791.1 mouse_genomes_project 4 153547182 153564887 - Alpl protein_coding processed_transcript MGP_NODShiLtJ_T0068416.1 MGP_NODShiLtJ_G0028791.1 mouse_genomes_project 4 153547182 153565092 - Alpl protein_coding processed_transcript MGP_NODShiLtJ_T0004378.1 MGP_NODShiLtJ_G0003812.1 mouse_genomes_project 4 37561572 37566318 + Gm12364 antisense antisense MGP_NODShiLtJ_T0017922.1 MGP_NODShiLtJ_G0015428.1 mouse_genomes_project 4 110501170 110504345 - Gm12676 processed_transcript processed_transcript MGP_NODShiLtJ_T0065339.1 MGP_NODShiLtJ_G0028088.1 mouse_genomes_project 4 54309352 54330134 - MGP_NODShiLtJ_P0065339 Baat protein_coding protein_coding MGP_NODShiLtJ_T0065340.1 MGP_NODShiLtJ_G0028088.1 mouse_genomes_project 4 54309750 54326721 - MGP_NODShiLtJ_P0065340 Baat protein_coding protein_coding MGP_NODShiLtJ_T0066719.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518263 129560586 + Mknk1 protein_coding processed_transcript MGP_NODShiLtJ_T0066720.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518263 129560586 + MGP_NODShiLtJ_P0066720 Mknk1 protein_coding protein_coding MGP_NODShiLtJ_T0066721.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518286 129544808 + MGP_NODShiLtJ_P0066721 Mknk1 protein_coding protein_coding MGP_NODShiLtJ_T0066722.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518288 129555206 + Mknk1 protein_coding processed_transcript MGP_NODShiLtJ_T0066723.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518298 129527647 + Mknk1 protein_coding processed_transcript MGP_NODShiLtJ_T0066724.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518298 129560586 + MGP_NODShiLtJ_P0066724 Mknk1 protein_coding protein_coding MGP_NODShiLtJ_T0066725.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518300 129546775 + MGP_NODShiLtJ_P0066725 Mknk1 protein_coding protein_coding MGP_NODShiLtJ_T0066726.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518305 129544845 + MGP_NODShiLtJ_P0066726 Mknk1 protein_coding protein_coding MGP_NODShiLtJ_T0066727.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518309 129536173 + MGP_NODShiLtJ_P0066727 Mknk1 protein_coding protein_coding MGP_NODShiLtJ_T0066728.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129518325 129543504 + Mknk1 protein_coding processed_transcript MGP_NODShiLtJ_T0066729.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129536107 129560000 + Mknk1 protein_coding processed_transcript MGP_NODShiLtJ_T0066730.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129536181 129557946 + Mknk1 protein_coding processed_transcript MGP_NODShiLtJ_T0066731.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129546509 129547570 + Mknk1 protein_coding processed_transcript MGP_NODShiLtJ_T0066732.1 MGP_NODShiLtJ_G0028416.1 mouse_genomes_project 4 129556106 129558388 + Mknk1 protein_coding processed_transcript MGP_NODShiLtJ_T0067414.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140945827 140986124 - MGP_NODShiLtJ_P0067414 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067415.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140945986 140947908 - protein_coding processed_transcript MGP_NODShiLtJ_T0067416.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140947479 140953950 - MGP_NODShiLtJ_P0067416 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067417.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140955766 140958927 - MGP_NODShiLtJ_P0067417 protein_coding protein_coding MGP_NODShiLtJ_T0067418.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140961493 140975237 - MGP_NODShiLtJ_P0067418 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067419.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140961669 140984615 - MGP_NODShiLtJ_P0067419 protein_coding protein_coding MGP_NODShiLtJ_T0067420.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140961678 140986063 - MGP_NODShiLtJ_P0067420 protein_coding protein_coding MGP_NODShiLtJ_T0067421.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140966917 140986097 - protein_coding retained_intron MGP_NODShiLtJ_T0067422.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140967098 140986133 - protein_coding retained_intron MGP_NODShiLtJ_T0067423.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140967336 140986121 - MGP_NODShiLtJ_P0067423 protein_coding protein_coding MGP_NODShiLtJ_T0067424.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140967342 140985850 - MGP_NODShiLtJ_P0067424 protein_coding protein_coding MGP_NODShiLtJ_T0067425.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140967348 140985864 - MGP_NODShiLtJ_P0067425 protein_coding protein_coding MGP_NODShiLtJ_T0067426.1 MGP_NODShiLtJ_G0028578.1 mouse_genomes_project 4 140974764 140986144 - protein_coding processed_transcript MGP_NODShiLtJ_T0007836.1 MGP_NODShiLtJ_G0006402.1 mouse_genomes_project 4 112596804 112598181 - Gm12688 lincRNA lincRNA MGP_NODShiLtJ_T0007877.1 MGP_NODShiLtJ_G0006434.1 mouse_genomes_project 4 139051389 139056732 - 1700057H15Rik lincRNA lincRNA MGP_NODShiLtJ_T0007878.1 MGP_NODShiLtJ_G0006434.1 mouse_genomes_project 4 139051389 139095223 - 1700057H15Rik lincRNA lincRNA MGP_NODShiLtJ_T0007879.1 MGP_NODShiLtJ_G0006434.1 mouse_genomes_project 4 139093829 139136104 - 1700057H15Rik lincRNA lincRNA MGP_NODShiLtJ_T0007880.1 MGP_NODShiLtJ_G0006434.1 mouse_genomes_project 4 139094162 139095213 - 1700057H15Rik lincRNA lincRNA MGP_NODShiLtJ_T0066340.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120599551 120646630 - MGP_NODShiLtJ_P0066340 Tceanc2 protein_coding protein_coding MGP_NODShiLtJ_T0066341.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120605625 120646449 - MGP_NODShiLtJ_P0066341 Tceanc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066342.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120605680 120646366 - Tceanc2 protein_coding processed_transcript MGP_NODShiLtJ_T0066343.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120605888 120647186 - MGP_NODShiLtJ_P0066343 Tceanc2 protein_coding protein_coding MGP_NODShiLtJ_T0066344.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120605932 120646365 - MGP_NODShiLtJ_P0066344 Tceanc2 protein_coding protein_coding MGP_NODShiLtJ_T0066345.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120606052 120647199 - MGP_NODShiLtJ_P0066345 Tceanc2 protein_coding protein_coding MGP_NODShiLtJ_T0066346.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120632999 120645934 - Tceanc2 protein_coding processed_transcript MGP_NODShiLtJ_T0066347.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120640735 120646291 - Tceanc2 protein_coding processed_transcript MGP_NODShiLtJ_T0066348.1 MGP_NODShiLtJ_G0028339.1 mouse_genomes_project 4 120644698 120645751 - Tceanc2 protein_coding processed_transcript MGP_NODShiLtJ_T0067911.1 MGP_NODShiLtJ_G0028675.1 mouse_genomes_project 4 147647995 147653191 - MGP_NODShiLtJ_P0067911 Med18 protein_coding protein_coding MGP_NODShiLtJ_T0067912.1 MGP_NODShiLtJ_G0028675.1 mouse_genomes_project 4 147649224 147652601 - MGP_NODShiLtJ_P0067912 Med18 protein_coding protein_coding MGP_NODShiLtJ_T0065679.1 MGP_NODShiLtJ_G0028186.1 mouse_genomes_project 4 72153104 73252689 - MGP_NODShiLtJ_P0065679 Astn2 protein_coding protein_coding MGP_NODShiLtJ_T0065680.1 MGP_NODShiLtJ_G0028186.1 mouse_genomes_project 4 72153104 73248239 - MGP_NODShiLtJ_P0065680 Astn2 protein_coding protein_coding MGP_NODShiLtJ_T0064850.1 MGP_NODShiLtJ_G0027990.1 mouse_genomes_project 4 46424314 46425447 + MGP_NODShiLtJ_P0064850 protein_coding protein_coding MGP_NODShiLtJ_T0067815.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145964598 145988701 + MGP_NODShiLtJ_P0067815 Laptm5 protein_coding protein_coding MGP_NODShiLtJ_T0067816.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145964727 145979862 + MGP_NODShiLtJ_P0067816 Laptm5 protein_coding protein_coding MGP_NODShiLtJ_T0067817.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145964733 145976239 + Laptm5 protein_coding processed_transcript MGP_NODShiLtJ_T0067818.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145964739 145979865 + Laptm5 protein_coding processed_transcript MGP_NODShiLtJ_T0067819.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145964740 145977538 + Laptm5 protein_coding processed_transcript MGP_NODShiLtJ_T0067820.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145964777 145986056 + MGP_NODShiLtJ_P0067820 Laptm5 protein_coding protein_coding MGP_NODShiLtJ_T0067821.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145966887 145979883 + Laptm5 protein_coding processed_transcript MGP_NODShiLtJ_T0067822.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145967085 145978025 + Laptm5 protein_coding processed_transcript MGP_NODShiLtJ_T0067823.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145967368 145987468 + MGP_NODShiLtJ_P0067823 Laptm5 protein_coding protein_coding MGP_NODShiLtJ_T0067824.1 MGP_NODShiLtJ_G0028659.1 mouse_genomes_project 4 145983218 145986340 + Laptm5 protein_coding processed_transcript MGP_NODShiLtJ_T0066412.1 MGP_NODShiLtJ_G0028350.1 mouse_genomes_project 4 121387316 121395814 + MGP_NODShiLtJ_P0066412 Magoh protein_coding protein_coding MGP_NODShiLtJ_T0066413.1 MGP_NODShiLtJ_G0028350.1 mouse_genomes_project 4 121390547 121395777 + Magoh protein_coding processed_transcript MGP_NODShiLtJ_T0068234.1 MGP_NODShiLtJ_G0028747.1 mouse_genomes_project 4 150990775 151013121 - MGP_NODShiLtJ_P0068234 Rcan3 protein_coding protein_coding MGP_NODShiLtJ_T0068235.1 MGP_NODShiLtJ_G0028747.1 mouse_genomes_project 4 150990775 151004536 - MGP_NODShiLtJ_P0068235 Rcan3 protein_coding protein_coding MGP_NODShiLtJ_T0068236.1 MGP_NODShiLtJ_G0028747.1 mouse_genomes_project 4 150996910 151013091 - MGP_NODShiLtJ_P0068236 Rcan3 protein_coding protein_coding MGP_NODShiLtJ_T0100570.1 MGP_NODShiLtJ_G0038964.1 mouse_genomes_project 4 130977767 130977837 - Gm22980 snoRNA snoRNA MGP_NODShiLtJ_T0014453.1 MGP_NODShiLtJ_G0012561.1 mouse_genomes_project 4 69389863 69390118 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100560.1 MGP_NODShiLtJ_G0038954.1 mouse_genomes_project 4 100357925 100358065 - Gm26490 snoRNA snoRNA MGP_NODShiLtJ_T0007789.1 MGP_NODShiLtJ_G0006362.1 mouse_genomes_project 4 61802432 61828714 - Gm12519 lincRNA lincRNA MGP_NODShiLtJ_T0067057.1 MGP_NODShiLtJ_G0028479.1 mouse_genomes_project 4 132463189 132538936 - MGP_NODShiLtJ_P0067057 Cfap57 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100527.1 MGP_NODShiLtJ_G0038921.1 mouse_genomes_project 4 44468731 44468826 - Gm23338 snoRNA snoRNA MGP_NODShiLtJ_T0065341.1 MGP_NODShiLtJ_G0028089.1 mouse_genomes_project 4 54339571 54349311 - MGP_NODShiLtJ_P0065341 Mrpl50 protein_coding protein_coding MGP_NODShiLtJ_T0014576.1 MGP_NODShiLtJ_G0012684.1 mouse_genomes_project 4 121173226 121173777 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069600.1 MGP_NODShiLtJ_G0029056.1 mouse_genomes_project 4 174133139 174147161 + MGP_NODShiLtJ_P0069600 Noc2l protein_coding protein_coding MGP_NODShiLtJ_T0069601.1 MGP_NODShiLtJ_G0029056.1 mouse_genomes_project 4 174133180 174147148 + MGP_NODShiLtJ_P0069601 Noc2l protein_coding protein_coding MGP_NODShiLtJ_T0064403.1 MGP_NODShiLtJ_G0027874.1 mouse_genomes_project 4 9588944 9642651 - MGP_NODShiLtJ_P0064403 Tmem67 protein_coding protein_coding MGP_NODShiLtJ_T0064404.1 MGP_NODShiLtJ_G0027874.1 mouse_genomes_project 4 9588952 9642632 - MGP_NODShiLtJ_P0064404 Tmem67 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064405.1 MGP_NODShiLtJ_G0027874.1 mouse_genomes_project 4 9589234 9644701 - MGP_NODShiLtJ_P0064405 Tmem67 protein_coding protein_coding MGP_NODShiLtJ_T0064406.1 MGP_NODShiLtJ_G0027874.1 mouse_genomes_project 4 9614277 9642701 - Tmem67 protein_coding retained_intron MGP_NODShiLtJ_T0064407.1 MGP_NODShiLtJ_G0027874.1 mouse_genomes_project 4 9622701 9642621 - Tmem67 protein_coding retained_intron MGP_NODShiLtJ_T0064408.1 MGP_NODShiLtJ_G0027874.1 mouse_genomes_project 4 9633278 9642626 - Tmem67 protein_coding retained_intron MGP_NODShiLtJ_T0066488.1 MGP_NODShiLtJ_G0028363.1 mouse_genomes_project 4 122151473 122155317 - Prpf38a protein_coding processed_transcript MGP_NODShiLtJ_T0066489.1 MGP_NODShiLtJ_G0028363.1 mouse_genomes_project 4 122153171 122170453 - MGP_NODShiLtJ_P0066489 Prpf38a protein_coding protein_coding MGP_NODShiLtJ_T0066490.1 MGP_NODShiLtJ_G0028363.1 mouse_genomes_project 4 122153174 122161977 - Prpf38a protein_coding processed_transcript MGP_NODShiLtJ_T0067800.1 MGP_NODShiLtJ_G0028656.1 mouse_genomes_project 4 145565749 145611068 + MGP_NODShiLtJ_P0067800 Nkain1 protein_coding protein_coding MGP_NODShiLtJ_T0067801.1 MGP_NODShiLtJ_G0028656.1 mouse_genomes_project 4 145565956 145611084 + MGP_NODShiLtJ_P0067801 Nkain1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067802.1 MGP_NODShiLtJ_G0028656.1 mouse_genomes_project 4 145583810 145603854 + Nkain1 protein_coding processed_transcript MGP_NODShiLtJ_T0067001.1 MGP_NODShiLtJ_G0028467.1 mouse_genomes_project 4 131797432 131801033 - MGP_NODShiLtJ_P0067001 Artn protein_coding protein_coding MGP_NODShiLtJ_T0067002.1 MGP_NODShiLtJ_G0028467.1 mouse_genomes_project 4 131797433 131800767 - MGP_NODShiLtJ_P0067002 Artn protein_coding protein_coding MGP_NODShiLtJ_T0067003.1 MGP_NODShiLtJ_G0028467.1 mouse_genomes_project 4 131799311 131800747 - Artn protein_coding processed_transcript MGP_NODShiLtJ_T0067004.1 MGP_NODShiLtJ_G0028467.1 mouse_genomes_project 4 131799413 131800683 - Artn protein_coding processed_transcript MGP_NODShiLtJ_T0007815.1 MGP_NODShiLtJ_G0006384.1 mouse_genomes_project 4 94546369 94550490 - Gm11415 lincRNA lincRNA MGP_NODShiLtJ_T0007949.1 MGP_NODShiLtJ_G0006481.1 mouse_genomes_project 4 157519524 157520926 + Gm13056 lincRNA lincRNA MGP_NODShiLtJ_T0101923.1 MGP_NODShiLtJ_G0040091.1 mouse_genomes_project 4 127549561 127550571 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0065152.1 MGP_NODShiLtJ_G0028042.1 mouse_genomes_project 4 49362665 49372005 + MGP_NODShiLtJ_P0065152 Grhpr protein_coding protein_coding MGP_NODShiLtJ_T0065153.1 MGP_NODShiLtJ_G0028042.1 mouse_genomes_project 4 49362673 49365214 + MGP_NODShiLtJ_P0065153 Grhpr protein_coding protein_coding MGP_NODShiLtJ_T0065154.1 MGP_NODShiLtJ_G0028042.1 mouse_genomes_project 4 49362702 49370281 + MGP_NODShiLtJ_P0065154 Grhpr protein_coding protein_coding MGP_NODShiLtJ_T0065155.1 MGP_NODShiLtJ_G0028042.1 mouse_genomes_project 4 49362703 49368598 + Grhpr protein_coding processed_transcript MGP_NODShiLtJ_T0065156.1 MGP_NODShiLtJ_G0028042.1 mouse_genomes_project 4 49362731 49368519 + MGP_NODShiLtJ_P0065156 Grhpr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065157.1 MGP_NODShiLtJ_G0028042.1 mouse_genomes_project 4 49362770 49367661 + Grhpr protein_coding processed_transcript MGP_NODShiLtJ_T0065521.1 MGP_NODShiLtJ_G0028140.1 mouse_genomes_project 4 65112179 65187424 - MGP_NODShiLtJ_P0065521 AI481877 protein_coding protein_coding MGP_NODShiLtJ_T0065522.1 MGP_NODShiLtJ_G0028140.1 mouse_genomes_project 4 65154014 65183814 - AI481877 protein_coding retained_intron MGP_NODShiLtJ_T0099262.1 MGP_NODShiLtJ_G0037656.1 mouse_genomes_project 4 49996647 49996754 + Gm22055 snRNA snRNA MGP_NODShiLtJ_T0064409.1 MGP_NODShiLtJ_G0027875.1 mouse_genomes_project 4 9644066 9648290 + Rbm12b2 protein_coding processed_transcript MGP_NODShiLtJ_T0064410.1 MGP_NODShiLtJ_G0027875.1 mouse_genomes_project 4 9644069 9658051 + MGP_NODShiLtJ_P0064410 Rbm12b2 protein_coding protein_coding MGP_NODShiLtJ_T0064411.1 MGP_NODShiLtJ_G0027875.1 mouse_genomes_project 4 9644087 9648630 + Rbm12b2 protein_coding processed_transcript MGP_NODShiLtJ_T0014290.1 MGP_NODShiLtJ_G0012398.1 mouse_genomes_project 4 11230568 11230949 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014448.1 MGP_NODShiLtJ_G0012556.1 mouse_genomes_project 4 64605779 64606196 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065559.1 MGP_NODShiLtJ_G0028152.1 mouse_genomes_project 4 68453223 68457016 - MGP_NODShiLtJ_P0065559 Mup3 protein_coding protein_coding MGP_NODShiLtJ_T0067585.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144153237 144164949 - MGP_NODShiLtJ_P0067585 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0067586.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144153237 144161880 - MGP_NODShiLtJ_P0067586 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0067587.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144153243 144164653 - MGP_NODShiLtJ_P0067587 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0067588.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144153243 144164204 - MGP_NODShiLtJ_P0067588 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0067589.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144153931 144163859 - MGP_NODShiLtJ_P0067589 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0067590.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144153945 144164802 - MGP_NODShiLtJ_P0067590 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0067591.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144154120 144164838 - MGP_NODShiLtJ_P0067591 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0067592.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144154342 144164652 - MGP_NODShiLtJ_P0067592 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0067593.1 MGP_NODShiLtJ_G0028617.1 mouse_genomes_project 4 144161517 144164621 - MGP_NODShiLtJ_P0067593 Hpca protein_coding protein_coding MGP_NODShiLtJ_T0064529.1 MGP_NODShiLtJ_G0027911.1 mouse_genomes_project 4 22138142 22145579 - MGP_NODShiLtJ_P0064529 Pou3f2 protein_coding protein_coding MGP_NODShiLtJ_T0014638.1 MGP_NODShiLtJ_G0012746.1 mouse_genomes_project 4 138486293 138486837 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068503.1 MGP_NODShiLtJ_G0028815.1 mouse_genomes_project 4 155062005 155072647 - MGP_NODShiLtJ_P0068503 Nbl1 protein_coding protein_coding MGP_NODShiLtJ_T0068504.1 MGP_NODShiLtJ_G0028815.1 mouse_genomes_project 4 155062928 155071760 - Nbl1 protein_coding processed_transcript MGP_NODShiLtJ_T0068505.1 MGP_NODShiLtJ_G0028815.1 mouse_genomes_project 4 155071729 155072622 - Nbl1 protein_coding processed_transcript MGP_NODShiLtJ_T0068755.1 MGP_NODShiLtJ_G0028880.1 mouse_genomes_project 4 160234576 160251437 + MGP_NODShiLtJ_P0068755 Gm13078 protein_coding protein_coding MGP_NODShiLtJ_T0066162.1 MGP_NODShiLtJ_G0028302.1 mouse_genomes_project 4 114674541 114688095 + MGP_NODShiLtJ_P0066162 Leprot protein_coding protein_coding MGP_NODShiLtJ_T0066163.1 MGP_NODShiLtJ_G0028302.1 mouse_genomes_project 4 114674616 114688095 + MGP_NODShiLtJ_P0066163 Leprot protein_coding protein_coding MGP_NODShiLtJ_T0066784.1 MGP_NODShiLtJ_G0028427.1 mouse_genomes_project 4 129863359 129869091 - MGP_NODShiLtJ_P0066784 Tspan1 protein_coding protein_coding MGP_NODShiLtJ_T0066785.1 MGP_NODShiLtJ_G0028427.1 mouse_genomes_project 4 129864798 129869092 - MGP_NODShiLtJ_P0066785 Tspan1 protein_coding protein_coding MGP_NODShiLtJ_T0066786.1 MGP_NODShiLtJ_G0028427.1 mouse_genomes_project 4 129864822 129866324 - Tspan1 protein_coding retained_intron MGP_NODShiLtJ_T0068604.1 MGP_NODShiLtJ_G0028840.1 mouse_genomes_project 4 157219200 157224693 - Crocc protein_coding retained_intron MGP_NODShiLtJ_T0068605.1 MGP_NODShiLtJ_G0028840.1 mouse_genomes_project 4 157219200 157231835 - Crocc protein_coding retained_intron MGP_NODShiLtJ_T0068606.1 MGP_NODShiLtJ_G0028840.1 mouse_genomes_project 4 157219547 157221370 - Crocc protein_coding retained_intron MGP_NODShiLtJ_T0068607.1 MGP_NODShiLtJ_G0028840.1 mouse_genomes_project 4 157219614 157257920 - MGP_NODShiLtJ_P0068607 Crocc protein_coding protein_coding MGP_NODShiLtJ_T0068608.1 MGP_NODShiLtJ_G0028840.1 mouse_genomes_project 4 157222294 157225085 - Crocc protein_coding retained_intron MGP_NODShiLtJ_T0068609.1 MGP_NODShiLtJ_G0028840.1 mouse_genomes_project 4 157224107 157225115 - Crocc protein_coding retained_intron MGP_NODShiLtJ_T0068610.1 MGP_NODShiLtJ_G0028840.1 mouse_genomes_project 4 157247686 157264919 - MGP_NODShiLtJ_P0068610 Crocc protein_coding protein_coding MGP_NODShiLtJ_T0068611.1 MGP_NODShiLtJ_G0028840.1 mouse_genomes_project 4 157248862 157262406 - Crocc protein_coding retained_intron MGP_NODShiLtJ_T0004436.1 MGP_NODShiLtJ_G0003857.1 mouse_genomes_project 4 120480675 120485203 - Gm12786 antisense antisense MGP_NODShiLtJ_T0068363.1 MGP_NODShiLtJ_G0028781.1 mouse_genomes_project 4 152685309 152755140 - MGP_NODShiLtJ_P0068363 Zbtb40 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068364.1 MGP_NODShiLtJ_G0028781.1 mouse_genomes_project 4 152685312 152755049 - MGP_NODShiLtJ_P0068364 Zbtb40 protein_coding protein_coding MGP_NODShiLtJ_T0068365.1 MGP_NODShiLtJ_G0028781.1 mouse_genomes_project 4 152719756 152755155 - Zbtb40 protein_coding retained_intron MGP_NODShiLtJ_T0066109.1 MGP_NODShiLtJ_G0028288.1 mouse_genomes_project 4 112198736 112200160 + MGP_NODShiLtJ_P0066109 Gm12689 protein_coding protein_coding MGP_NODShiLtJ_T0064752.1 MGP_NODShiLtJ_G0027965.1 mouse_genomes_project 4 44999608 45016973 + MGP_NODShiLtJ_P0064752 Chmp5 protein_coding protein_coding MGP_NODShiLtJ_T0068691.1 MGP_NODShiLtJ_G0028858.1 mouse_genomes_project 4 157902429 157944300 - MGP_NODShiLtJ_P0068691 Plekhm2 protein_coding protein_coding MGP_NODShiLtJ_T0068692.1 MGP_NODShiLtJ_G0028858.1 mouse_genomes_project 4 157902429 157945081 - MGP_NODShiLtJ_P0068692 Plekhm2 protein_coding protein_coding MGP_NODShiLtJ_T0068693.1 MGP_NODShiLtJ_G0028858.1 mouse_genomes_project 4 157905027 157906232 - Plekhm2 protein_coding retained_intron MGP_NODShiLtJ_T0068694.1 MGP_NODShiLtJ_G0028858.1 mouse_genomes_project 4 157907142 157907743 - Plekhm2 protein_coding retained_intron MGP_NODShiLtJ_T0068695.1 MGP_NODShiLtJ_G0028858.1 mouse_genomes_project 4 157909162 157918765 - Plekhm2 protein_coding retained_intron MGP_NODShiLtJ_T0068696.1 MGP_NODShiLtJ_G0028858.1 mouse_genomes_project 4 157917886 157919332 - Plekhm2 protein_coding retained_intron MGP_NODShiLtJ_T0004564.1 MGP_NODShiLtJ_G0003953.1 mouse_genomes_project 4 173715702 173716389 - Mxra8os antisense antisense MGP_NODShiLtJ_T0064293.1 MGP_NODShiLtJ_G0027852.1 mouse_genomes_project 4 3684906 3686212 - Tox protein_coding processed_transcript MGP_NODShiLtJ_T0064294.1 MGP_NODShiLtJ_G0027852.1 mouse_genomes_project 4 3685285 4009172 - MGP_NODShiLtJ_P0064294 Tox protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064295.1 MGP_NODShiLtJ_G0027852.1 mouse_genomes_project 4 3739730 4009954 - Tox protein_coding retained_intron MGP_NODShiLtJ_T0064296.1 MGP_NODShiLtJ_G0027852.1 mouse_genomes_project 4 3826615 4008882 - Tox protein_coding retained_intron MGP_NODShiLtJ_T0101931.1 MGP_NODShiLtJ_G0040099.1 mouse_genomes_project 4 136043413 136066016 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0064764.1 MGP_NODShiLtJ_G0027968.1 mouse_genomes_project 4 45157026 45162477 - MGP_NODShiLtJ_P0064764 Aqp3 protein_coding protein_coding MGP_NODShiLtJ_T0064765.1 MGP_NODShiLtJ_G0027968.1 mouse_genomes_project 4 45158075 45158742 - Aqp3 protein_coding retained_intron MGP_NODShiLtJ_T0007944.1 MGP_NODShiLtJ_G0006476.1 mouse_genomes_project 4 156507187 156512132 + Gm13016 lincRNA lincRNA MGP_NODShiLtJ_T0068510.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155182225 155286960 + MGP_NODShiLtJ_P0068510 Capzb protein_coding protein_coding MGP_NODShiLtJ_T0068511.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155182240 155233290 + Capzb protein_coding retained_intron MGP_NODShiLtJ_T0068512.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155182245 155287025 + MGP_NODShiLtJ_P0068512 Capzb protein_coding protein_coding MGP_NODShiLtJ_T0068513.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155182270 155287016 + Capzb protein_coding processed_transcript MGP_NODShiLtJ_T0068514.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155183297 155286642 + MGP_NODShiLtJ_P0068514 Capzb protein_coding protein_coding MGP_NODShiLtJ_T0068515.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155183412 155233550 + Capzb protein_coding retained_intron MGP_NODShiLtJ_T0068516.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155188568 155256367 + MGP_NODShiLtJ_P0068516 Capzb protein_coding protein_coding MGP_NODShiLtJ_T0068517.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155221081 155282291 + MGP_NODShiLtJ_P0068517 Capzb protein_coding protein_coding MGP_NODShiLtJ_T0068518.1 MGP_NODShiLtJ_G0028817.1 mouse_genomes_project 4 155284147 155285017 + Capzb protein_coding processed_transcript MGP_NODShiLtJ_T0004461.1 MGP_NODShiLtJ_G0003875.1 mouse_genomes_project 4 132551070 132554597 - Gm12853 antisense antisense MGP_NODShiLtJ_T0066171.1 MGP_NODShiLtJ_G0028304.1 mouse_genomes_project 4 114955926 114959622 - MGP_NODShiLtJ_P0066171 C130073F10Rik protein_coding protein_coding MGP_NODShiLtJ_T0065773.1 MGP_NODShiLtJ_G0028208.1 mouse_genomes_project 4 93379976 93448406 - MGP_NODShiLtJ_P0065773 Zdhhc21 protein_coding protein_coding MGP_NODShiLtJ_T0065774.1 MGP_NODShiLtJ_G0028208.1 mouse_genomes_project 4 93385300 93448294 - MGP_NODShiLtJ_P0065774 Zdhhc21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065775.1 MGP_NODShiLtJ_G0028208.1 mouse_genomes_project 4 93387462 93448691 - MGP_NODShiLtJ_P0065775 Zdhhc21 protein_coding protein_coding MGP_NODShiLtJ_T0065776.1 MGP_NODShiLtJ_G0028208.1 mouse_genomes_project 4 93425145 93438280 - MGP_NODShiLtJ_P0065776 Zdhhc21 protein_coding protein_coding MGP_NODShiLtJ_T0065777.1 MGP_NODShiLtJ_G0028208.1 mouse_genomes_project 4 93427201 93448287 - Zdhhc21 protein_coding retained_intron MGP_NODShiLtJ_T0065778.1 MGP_NODShiLtJ_G0028208.1 mouse_genomes_project 4 93435082 93448306 - MGP_NODShiLtJ_P0065778 Zdhhc21 protein_coding protein_coding MGP_NODShiLtJ_T0098032.1 MGP_NODShiLtJ_G0036444.1 mouse_genomes_project 4 53490768 53490880 - Gm24573 rRNA rRNA MGP_NODShiLtJ_T0101930.1 MGP_NODShiLtJ_G0040098.1 mouse_genomes_project 4 135673880 135676526 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0066434.1 MGP_NODShiLtJ_G0028353.1 mouse_genomes_project 4 121484079 121532766 + MGP_NODShiLtJ_P0066434 Slc1a7 protein_coding protein_coding MGP_NODShiLtJ_T0066435.1 MGP_NODShiLtJ_G0028353.1 mouse_genomes_project 4 121529294 121532760 + Slc1a7 protein_coding retained_intron MGP_NODShiLtJ_T0067072.1 MGP_NODShiLtJ_G0028489.1 mouse_genomes_project 4 132892467 132893408 - MGP_NODShiLtJ_P0067072 Olfr1329 protein_coding protein_coding MGP_NODShiLtJ_T0004526.1 MGP_NODShiLtJ_G0003926.1 mouse_genomes_project 4 165091097 165095420 - Gm13054 antisense antisense MGP_NODShiLtJ_T0007858.1 MGP_NODShiLtJ_G0006417.1 mouse_genomes_project 4 121264760 121270079 + Gm12907 lincRNA lincRNA MGP_NODShiLtJ_T0067789.1 MGP_NODShiLtJ_G0028652.1 mouse_genomes_project 4 145462844 145463357 - MGP_NODShiLtJ_P0067789 Gm10570 protein_coding protein_coding MGP_NODShiLtJ_T0068226.1 MGP_NODShiLtJ_G0028746.1 mouse_genomes_project 4 150946664 150975256 - MGP_NODShiLtJ_P0068226 Ncmap protein_coding protein_coding MGP_NODShiLtJ_T0068227.1 MGP_NODShiLtJ_G0028746.1 mouse_genomes_project 4 150946664 150962690 - MGP_NODShiLtJ_P0068227 Ncmap protein_coding protein_coding MGP_NODShiLtJ_T0068228.1 MGP_NODShiLtJ_G0028746.1 mouse_genomes_project 4 150946664 150975225 - MGP_NODShiLtJ_P0068228 Ncmap protein_coding protein_coding MGP_NODShiLtJ_T0068229.1 MGP_NODShiLtJ_G0028746.1 mouse_genomes_project 4 150946665 150962707 - MGP_NODShiLtJ_P0068229 Ncmap protein_coding protein_coding MGP_NODShiLtJ_T0068230.1 MGP_NODShiLtJ_G0028746.1 mouse_genomes_project 4 150947315 150962680 - MGP_NODShiLtJ_P0068230 Ncmap protein_coding protein_coding MGP_NODShiLtJ_T0068231.1 MGP_NODShiLtJ_G0028746.1 mouse_genomes_project 4 150947605 150951723 - Ncmap protein_coding processed_transcript MGP_NODShiLtJ_T0068232.1 MGP_NODShiLtJ_G0028746.1 mouse_genomes_project 4 150947740 150962707 - MGP_NODShiLtJ_P0068232 Ncmap protein_coding protein_coding MGP_NODShiLtJ_T0068233.1 MGP_NODShiLtJ_G0028746.1 mouse_genomes_project 4 150949025 150975262 - MGP_NODShiLtJ_P0068233 Ncmap protein_coding protein_coding MGP_NODShiLtJ_T0007831.1 MGP_NODShiLtJ_G0006398.1 mouse_genomes_project 4 107677759 107695198 + Gm12708 lincRNA lincRNA MGP_NODShiLtJ_T0007832.1 MGP_NODShiLtJ_G0006398.1 mouse_genomes_project 4 107677808 107691719 + Gm12708 lincRNA lincRNA MGP_NODShiLtJ_T0068492.1 MGP_NODShiLtJ_G0028810.1 mouse_genomes_project 4 154855546 154860422 + MGP_NODShiLtJ_P0068492 Pla2g2e protein_coding protein_coding MGP_NODShiLtJ_T0068493.1 MGP_NODShiLtJ_G0028810.1 mouse_genomes_project 4 154855575 154860127 + MGP_NODShiLtJ_P0068493 Pla2g2e protein_coding protein_coding MGP_NODShiLtJ_T0068494.1 MGP_NODShiLtJ_G0028810.1 mouse_genomes_project 4 154856964 154860422 + MGP_NODShiLtJ_P0068494 Pla2g2e protein_coding protein_coding MGP_NODShiLtJ_T0004546.1 MGP_NODShiLtJ_G0003941.1 mouse_genomes_project 4 168875279 168878390 + 4930589P08Rik antisense antisense MGP_NODShiLtJ_T0014640.1 MGP_NODShiLtJ_G0012748.1 mouse_genomes_project 4 139372589 139373228 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067517.1 MGP_NODShiLtJ_G0028598.1 mouse_genomes_project 4 142067197 142139172 + MGP_NODShiLtJ_P0067517 Dlgap3 protein_coding protein_coding MGP_NODShiLtJ_T0067518.1 MGP_NODShiLtJ_G0028598.1 mouse_genomes_project 4 142070863 142139172 + MGP_NODShiLtJ_P0067518 Dlgap3 protein_coding protein_coding MGP_NODShiLtJ_T0067519.1 MGP_NODShiLtJ_G0028598.1 mouse_genomes_project 4 142094206 142138518 + MGP_NODShiLtJ_P0067519 Dlgap3 protein_coding protein_coding MGP_NODShiLtJ_T0067520.1 MGP_NODShiLtJ_G0028598.1 mouse_genomes_project 4 142103914 142114812 + Dlgap3 protein_coding processed_transcript MGP_NODShiLtJ_T0007868.1 MGP_NODShiLtJ_G0006426.1 mouse_genomes_project 4 132966044 132981142 - Gm12865 lincRNA lincRNA MGP_NODShiLtJ_T0065646.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933420 70018055 - MGP_NODShiLtJ_P0065646 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065647.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933425 70015787 - Whrn protein_coding processed_transcript MGP_NODShiLtJ_T0065648.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933425 69951851 - Whrn protein_coding retained_intron MGP_NODShiLtJ_T0065649.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933425 69951851 - Whrn protein_coding retained_intron MGP_NODShiLtJ_T0065650.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933425 70018773 - MGP_NODShiLtJ_P0065650 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065651.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933425 70018773 - MGP_NODShiLtJ_P0065651 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065652.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933425 70018773 - MGP_NODShiLtJ_P0065652 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065653.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933425 70018773 - MGP_NODShiLtJ_P0065653 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065654.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69933425 70018773 - MGP_NODShiLtJ_P0065654 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065655.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69937986 69950458 - MGP_NODShiLtJ_P0065655 Whrn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065656.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69944237 69950531 - Whrn protein_coding processed_transcript MGP_NODShiLtJ_T0065657.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69949961 70018813 - MGP_NODShiLtJ_P0065657 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065658.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69953329 69981382 - Whrn protein_coding retained_intron MGP_NODShiLtJ_T0065659.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69954757 69994130 - MGP_NODShiLtJ_P0065659 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065660.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69980242 70017581 - MGP_NODShiLtJ_P0065660 Whrn protein_coding protein_coding MGP_NODShiLtJ_T0065661.1 MGP_NODShiLtJ_G0028177.1 mouse_genomes_project 4 69980899 70017499 - Whrn protein_coding retained_intron MGP_NODShiLtJ_T0067446.1 MGP_NODShiLtJ_G0028584.1 mouse_genomes_project 4 141133822 141155487 - MGP_NODShiLtJ_P0067446 Ago3 protein_coding protein_coding MGP_NODShiLtJ_T0067447.1 MGP_NODShiLtJ_G0028584.1 mouse_genomes_project 4 141137909 141240447 - MGP_NODShiLtJ_P0067447 Ago3 protein_coding protein_coding MGP_NODShiLtJ_T0067448.1 MGP_NODShiLtJ_G0028584.1 mouse_genomes_project 4 141150738 141156069 - MGP_NODShiLtJ_P0067448 Ago3 protein_coding protein_coding MGP_NODShiLtJ_T0067449.1 MGP_NODShiLtJ_G0028584.1 mouse_genomes_project 4 141198649 141240177 - MGP_NODShiLtJ_P0067449 Ago3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067450.1 MGP_NODShiLtJ_G0028584.1 mouse_genomes_project 4 141204087 141210476 - Ago3 protein_coding processed_transcript MGP_NODShiLtJ_T0067451.1 MGP_NODShiLtJ_G0028584.1 mouse_genomes_project 4 141214953 141240432 - Ago3 protein_coding processed_transcript MGP_NODShiLtJ_T0066897.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130925704 130928816 - Btbd19 protein_coding processed_transcript MGP_NODShiLtJ_T0066898.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130926362 130928871 - Btbd19 protein_coding processed_transcript MGP_NODShiLtJ_T0066899.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130926660 130933445 - MGP_NODShiLtJ_P0066899 Btbd19 protein_coding protein_coding MGP_NODShiLtJ_T0066900.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130927136 130928845 - Btbd19 protein_coding processed_transcript MGP_NODShiLtJ_T0066901.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130927191 130927751 - Btbd19 protein_coding retained_intron MGP_NODShiLtJ_T0066902.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130927214 130928363 - Btbd19 protein_coding retained_intron MGP_NODShiLtJ_T0066903.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130927798 130933552 - MGP_NODShiLtJ_P0066903 Btbd19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066904.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130927925 130933485 - MGP_NODShiLtJ_P0066904 Btbd19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066905.1 MGP_NODShiLtJ_G0028449.1 mouse_genomes_project 4 130930453 130932993 - Btbd19 protein_coding processed_transcript MGP_NODShiLtJ_T0014654.1 MGP_NODShiLtJ_G0012762.1 mouse_genomes_project 4 144447249 144447585 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007863.1 MGP_NODShiLtJ_G0006421.1 mouse_genomes_project 4 128150291 128150935 - Gm28864 lincRNA lincRNA MGP_NODShiLtJ_T0017962.1 MGP_NODShiLtJ_G0015451.1 mouse_genomes_project 4 172757265 172758174 - Gm20421 processed_transcript processed_transcript MGP_NODShiLtJ_T0065724.1 MGP_NODShiLtJ_G0028199.1 mouse_genomes_project 4 83985029 83985981 - MGP_NODShiLtJ_P0065724 Tmem261 protein_coding protein_coding MGP_NODShiLtJ_T0099310.1 MGP_NODShiLtJ_G0037704.1 mouse_genomes_project 4 147629734 147629828 + Gm23055 snRNA snRNA MGP_NODShiLtJ_T0004495.1 MGP_NODShiLtJ_G0003902.1 mouse_genomes_project 4 150699330 150700195 - Gm16224 antisense antisense MGP_NODShiLtJ_T0014465.1 MGP_NODShiLtJ_G0012573.1 mouse_genomes_project 4 77256333 77256930 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014431.1 MGP_NODShiLtJ_G0012539.1 mouse_genomes_project 4 59420919 59421306 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064422.1 MGP_NODShiLtJ_G0027879.1 mouse_genomes_project 4 11545080 11716920 + MGP_NODShiLtJ_P0064422 Runx1t1 protein_coding protein_coding MGP_NODShiLtJ_T0064423.1 MGP_NODShiLtJ_G0027879.1 mouse_genomes_project 4 11552940 11660970 + Runx1t1 protein_coding processed_transcript MGP_NODShiLtJ_T0064424.1 MGP_NODShiLtJ_G0027879.1 mouse_genomes_project 4 11552940 11716895 + MGP_NODShiLtJ_P0064424 Runx1t1 protein_coding protein_coding MGP_NODShiLtJ_T0064425.1 MGP_NODShiLtJ_G0027879.1 mouse_genomes_project 4 11577926 11711403 + MGP_NODShiLtJ_P0064425 Runx1t1 protein_coding protein_coding MGP_NODShiLtJ_T0064426.1 MGP_NODShiLtJ_G0027879.1 mouse_genomes_project 4 11592053 11712208 + MGP_NODShiLtJ_P0064426 Runx1t1 protein_coding protein_coding MGP_NODShiLtJ_T0064427.1 MGP_NODShiLtJ_G0027879.1 mouse_genomes_project 4 11710299 11711042 + Runx1t1 protein_coding processed_transcript MGP_NODShiLtJ_T0068284.1 MGP_NODShiLtJ_G0028760.1 mouse_genomes_project 4 151589985 151594392 - MGP_NODShiLtJ_P0068284 Lypla2 protein_coding protein_coding MGP_NODShiLtJ_T0068285.1 MGP_NODShiLtJ_G0028760.1 mouse_genomes_project 4 151589985 151593695 - MGP_NODShiLtJ_P0068285 Lypla2 protein_coding protein_coding MGP_NODShiLtJ_T0068286.1 MGP_NODShiLtJ_G0028760.1 mouse_genomes_project 4 151590462 151592232 - Lypla2 protein_coding retained_intron MGP_NODShiLtJ_T0068287.1 MGP_NODShiLtJ_G0028760.1 mouse_genomes_project 4 151590525 151594354 - Lypla2 protein_coding retained_intron MGP_NODShiLtJ_T0068288.1 MGP_NODShiLtJ_G0028760.1 mouse_genomes_project 4 151592411 151594369 - Lypla2 protein_coding retained_intron MGP_NODShiLtJ_T0010552.1 MGP_NODShiLtJ_G0008685.1 mouse_genomes_project 4 173657954 173658080 + Gm27743 miRNA miRNA MGP_NODShiLtJ_T0064297.1 MGP_NODShiLtJ_G0027853.1 mouse_genomes_project 4 5340308 5437713 - MGP_NODShiLtJ_P0064297 Car8 protein_coding protein_coding MGP_NODShiLtJ_T0011466.1 MGP_NODShiLtJ_G0009599.1 mouse_genomes_project 4 114581529 114581803 + Gm22533 misc_RNA misc_RNA MGP_NODShiLtJ_T0017963.1 MGP_NODShiLtJ_G0015452.1 mouse_genomes_project 4 173230269 173256559 - 5830444B04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017964.1 MGP_NODShiLtJ_G0015452.1 mouse_genomes_project 4 173240493 173248397 - 5830444B04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017965.1 MGP_NODShiLtJ_G0015452.1 mouse_genomes_project 4 173240494 173256559 - 5830444B04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017966.1 MGP_NODShiLtJ_G0015452.1 mouse_genomes_project 4 173241740 173248376 - 5830444B04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0014318.1 MGP_NODShiLtJ_G0012426.1 mouse_genomes_project 4 18421569 18422421 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011473.1 MGP_NODShiLtJ_G0009606.1 mouse_genomes_project 4 135302223 135302542 + Gm22982 misc_RNA misc_RNA MGP_NODShiLtJ_T0065603.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 68993440 69096056 + MGP_NODShiLtJ_P0065603 protein_coding protein_coding MGP_NODShiLtJ_T0065604.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69017105 69093655 + MGP_NODShiLtJ_P0065604 protein_coding protein_coding MGP_NODShiLtJ_T0065605.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69038959 69059282 + protein_coding processed_transcript MGP_NODShiLtJ_T0065606.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69054959 69096056 + MGP_NODShiLtJ_P0065606 protein_coding protein_coding MGP_NODShiLtJ_T0065607.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69058896 69066688 + protein_coding processed_transcript MGP_NODShiLtJ_T0065608.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69059074 69061896 + protein_coding retained_intron MGP_NODShiLtJ_T0065609.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69070617 69134986 + protein_coding retained_intron MGP_NODShiLtJ_T0065610.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69070617 69140657 + protein_coding retained_intron MGP_NODShiLtJ_T0065611.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69088789 69096056 + protein_coding retained_intron MGP_NODShiLtJ_T0065612.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69105098 69127486 + MGP_NODShiLtJ_P0065612 protein_coding protein_coding MGP_NODShiLtJ_T0065613.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69110555 69126246 + protein_coding processed_transcript MGP_NODShiLtJ_T0065614.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69127638 69139544 + MGP_NODShiLtJ_P0065614 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065615.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69136530 69140657 + protein_coding retained_intron MGP_NODShiLtJ_T0065616.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69136744 69138218 + protein_coding processed_transcript MGP_NODShiLtJ_T0065617.1 MGP_NODShiLtJ_G0028167.1 mouse_genomes_project 4 69137759 69141640 + MGP_NODShiLtJ_P0065617 protein_coding protein_coding MGP_NODShiLtJ_T0065595.1 MGP_NODShiLtJ_G0028164.1 mouse_genomes_project 4 68935646 68949036 - Alad protein_coding processed_transcript MGP_NODShiLtJ_T0065596.1 MGP_NODShiLtJ_G0028164.1 mouse_genomes_project 4 68935646 68949073 - MGP_NODShiLtJ_P0065596 Alad protein_coding protein_coding MGP_NODShiLtJ_T0065597.1 MGP_NODShiLtJ_G0028164.1 mouse_genomes_project 4 68935646 68949049 - MGP_NODShiLtJ_P0065597 Alad protein_coding protein_coding MGP_NODShiLtJ_T0067324.1 MGP_NODShiLtJ_G0028554.1 mouse_genomes_project 4 139340737 139357387 - MGP_NODShiLtJ_P0067324 Utp11l protein_coding protein_coding MGP_NODShiLtJ_T0067325.1 MGP_NODShiLtJ_G0028554.1 mouse_genomes_project 4 139341378 139357321 - Utp11l protein_coding processed_transcript MGP_NODShiLtJ_T0099301.1 MGP_NODShiLtJ_G0037695.1 mouse_genomes_project 4 135242931 135243095 - Gm23540 snRNA snRNA MGP_NODShiLtJ_T0065296.1 MGP_NODShiLtJ_G0028076.1 mouse_genomes_project 4 52088039 52096613 + MGP_NODShiLtJ_P0065296 protein_coding protein_coding MGP_NODShiLtJ_T0065297.1 MGP_NODShiLtJ_G0028076.1 mouse_genomes_project 4 52088145 52096499 + MGP_NODShiLtJ_P0065297 protein_coding protein_coding MGP_NODShiLtJ_T0065298.1 MGP_NODShiLtJ_G0028076.1 mouse_genomes_project 4 52088189 52096465 + MGP_NODShiLtJ_P0065298 protein_coding protein_coding MGP_NODShiLtJ_T0065299.1 MGP_NODShiLtJ_G0028076.1 mouse_genomes_project 4 52088329 52094162 + protein_coding retained_intron MGP_NODShiLtJ_T0014517.1 MGP_NODShiLtJ_G0012625.1 mouse_genomes_project 4 98563996 98564758 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069070.1 MGP_NODShiLtJ_G0028959.1 mouse_genomes_project 4 168022818 168050025 - MGP_NODShiLtJ_P0069070 Slc45a1 protein_coding protein_coding MGP_NODShiLtJ_T0069071.1 MGP_NODShiLtJ_G0028959.1 mouse_genomes_project 4 168024284 168049948 - MGP_NODShiLtJ_P0069071 Slc45a1 protein_coding protein_coding MGP_NODShiLtJ_T0069072.1 MGP_NODShiLtJ_G0028959.1 mouse_genomes_project 4 168041441 168042242 - Slc45a1 protein_coding retained_intron MGP_NODShiLtJ_T0011477.1 MGP_NODShiLtJ_G0009610.1 mouse_genomes_project 4 169755935 169756271 - Gm27500 misc_RNA misc_RNA MGP_NODShiLtJ_T0010517.1 MGP_NODShiLtJ_G0008650.1 mouse_genomes_project 4 139400949 139401058 + Mir697 miRNA miRNA MGP_NODShiLtJ_T0017884.1 MGP_NODShiLtJ_G0015402.1 mouse_genomes_project 4 14269996 14372836 + A530072M11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0064798.1 MGP_NODShiLtJ_G0027977.1 mouse_genomes_project 4 45612736 45615491 - 1110017D15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0064799.1 MGP_NODShiLtJ_G0027977.1 mouse_genomes_project 4 45612736 45615481 - 1110017D15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0064800.1 MGP_NODShiLtJ_G0027977.1 mouse_genomes_project 4 45612736 45615486 - 1110017D15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0064801.1 MGP_NODShiLtJ_G0027977.1 mouse_genomes_project 4 45612736 45619167 - MGP_NODShiLtJ_P0064801 1110017D15Rik protein_coding protein_coding MGP_NODShiLtJ_T0064802.1 MGP_NODShiLtJ_G0027977.1 mouse_genomes_project 4 45612736 45625595 - MGP_NODShiLtJ_P0064802 1110017D15Rik protein_coding protein_coding MGP_NODShiLtJ_T0064803.1 MGP_NODShiLtJ_G0027977.1 mouse_genomes_project 4 45612736 45625595 - MGP_NODShiLtJ_P0064803 1110017D15Rik protein_coding protein_coding MGP_NODShiLtJ_T0064804.1 MGP_NODShiLtJ_G0027977.1 mouse_genomes_project 4 45614851 45625590 - 1110017D15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0064805.1 MGP_NODShiLtJ_G0027977.1 mouse_genomes_project 4 45616244 45616675 - 1110017D15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0069194.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169873502 169885092 - MGP_NODShiLtJ_P0069194 Rnf207 protein_coding protein_coding MGP_NODShiLtJ_T0069195.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169873794 169875517 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0069196.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169877867 169884942 - MGP_NODShiLtJ_P0069196 Rnf207 protein_coding protein_coding MGP_NODShiLtJ_T0069197.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169878040 169879887 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0069198.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169878199 169879832 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0069199.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169879317 169879884 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0069200.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169879876 169884965 - MGP_NODShiLtJ_P0069200 Rnf207 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069201.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169879886 169882449 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0069202.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169881036 169885477 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0069203.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169881038 169885103 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0069204.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169881369 169885109 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0069205.1 MGP_NODShiLtJ_G0028983.1 mouse_genomes_project 4 169881944 169882812 - Rnf207 protein_coding retained_intron MGP_NODShiLtJ_T0065360.1 MGP_NODShiLtJ_G0028094.1 mouse_genomes_project 4 54503291 54699955 - MGP_NODShiLtJ_P0065360 Grin3a protein_coding protein_coding MGP_NODShiLtJ_T0065361.1 MGP_NODShiLtJ_G0028094.1 mouse_genomes_project 4 54503291 54699955 - MGP_NODShiLtJ_P0065361 Grin3a protein_coding protein_coding MGP_NODShiLtJ_T0065363.1 MGP_NODShiLtJ_G0028094.1 mouse_genomes_project 4 54546694 54562717 - Grin3a protein_coding processed_transcript MGP_NODShiLtJ_T0065364.1 MGP_NODShiLtJ_G0028094.1 mouse_genomes_project 4 54610475 54700150 - Grin3a protein_coding processed_transcript MGP_NODShiLtJ_T0065766.1 MGP_NODShiLtJ_G0028207.1 mouse_genomes_project 4 92836605 93053282 - MGP_NODShiLtJ_P0065766 Nfib protein_coding protein_coding MGP_NODShiLtJ_T0065767.1 MGP_NODShiLtJ_G0028207.1 mouse_genomes_project 4 92868370 93053832 - Nfib protein_coding retained_intron MGP_NODShiLtJ_T0065768.1 MGP_NODShiLtJ_G0028207.1 mouse_genomes_project 4 92870139 93053832 - Nfib protein_coding retained_intron MGP_NODShiLtJ_T0065769.1 MGP_NODShiLtJ_G0028207.1 mouse_genomes_project 4 92895819 93055147 - Nfib protein_coding retained_intron MGP_NODShiLtJ_T0065770.1 MGP_NODShiLtJ_G0028207.1 mouse_genomes_project 4 93044503 93055162 - Nfib protein_coding retained_intron MGP_NODShiLtJ_T0065771.1 MGP_NODShiLtJ_G0028207.1 mouse_genomes_project 4 93046840 93278220 - MGP_NODShiLtJ_P0065771 Nfib protein_coding protein_coding MGP_NODShiLtJ_T0065772.1 MGP_NODShiLtJ_G0028207.1 mouse_genomes_project 4 93047063 93047836 - Nfib protein_coding processed_transcript MGP_NODShiLtJ_T0065492.1 MGP_NODShiLtJ_G0028132.1 mouse_genomes_project 4 64430844 64509079 - MGP_NODShiLtJ_P0065492 Lpar1 protein_coding protein_coding MGP_NODShiLtJ_T0065493.1 MGP_NODShiLtJ_G0028132.1 mouse_genomes_project 4 64430844 64564138 - MGP_NODShiLtJ_P0065493 Lpar1 protein_coding protein_coding MGP_NODShiLtJ_T0065494.1 MGP_NODShiLtJ_G0028132.1 mouse_genomes_project 4 64430845 64564334 - MGP_NODShiLtJ_P0065494 Lpar1 protein_coding protein_coding MGP_NODShiLtJ_T0065495.1 MGP_NODShiLtJ_G0028132.1 mouse_genomes_project 4 64430845 64564092 - MGP_NODShiLtJ_P0065495 Lpar1 protein_coding protein_coding MGP_NODShiLtJ_T0065496.1 MGP_NODShiLtJ_G0028132.1 mouse_genomes_project 4 64430845 64564409 - MGP_NODShiLtJ_P0065496 Lpar1 protein_coding protein_coding MGP_NODShiLtJ_T0065497.1 MGP_NODShiLtJ_G0028132.1 mouse_genomes_project 4 64496303 64559191 - MGP_NODShiLtJ_P0065497 Lpar1 protein_coding protein_coding MGP_NODShiLtJ_T0065498.1 MGP_NODShiLtJ_G0028132.1 mouse_genomes_project 4 64496358 64564679 - MGP_NODShiLtJ_P0065498 Lpar1 protein_coding protein_coding MGP_NODShiLtJ_T0065499.1 MGP_NODShiLtJ_G0028132.1 mouse_genomes_project 4 64496392 64563965 - MGP_NODShiLtJ_P0065499 Lpar1 protein_coding protein_coding MGP_NODShiLtJ_T0068497.1 MGP_NODShiLtJ_G0028813.1 mouse_genomes_project 4 154954645 154972500 + MGP_NODShiLtJ_P0068497 Tmco4 protein_coding protein_coding MGP_NODShiLtJ_T0068498.1 MGP_NODShiLtJ_G0028813.1 mouse_genomes_project 4 154954649 155038845 + MGP_NODShiLtJ_P0068498 Tmco4 protein_coding protein_coding MGP_NODShiLtJ_T0068499.1 MGP_NODShiLtJ_G0028813.1 mouse_genomes_project 4 154954662 155038841 + MGP_NODShiLtJ_P0068499 Tmco4 protein_coding protein_coding MGP_NODShiLtJ_T0068500.1 MGP_NODShiLtJ_G0028813.1 mouse_genomes_project 4 154954666 155015598 + Tmco4 protein_coding processed_transcript MGP_NODShiLtJ_T0014335.1 MGP_NODShiLtJ_G0012443.1 mouse_genomes_project 4 25634295 25636131 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014590.1 MGP_NODShiLtJ_G0012698.1 mouse_genomes_project 4 125920845 125921839 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004410.1 MGP_NODShiLtJ_G0003841.1 mouse_genomes_project 4 93265340 93266247 + Gm11269 antisense antisense MGP_NODShiLtJ_T0007835.1 MGP_NODShiLtJ_G0006401.1 mouse_genomes_project 4 112493837 112497349 + Gm12690 lincRNA lincRNA MGP_NODShiLtJ_T0065932.1 MGP_NODShiLtJ_G0028242.1 mouse_genomes_project 4 99917918 99918491 + MGP_NODShiLtJ_P0065932 Ifna7 protein_coding protein_coding MGP_NODShiLtJ_T0099244.1 MGP_NODShiLtJ_G0037638.1 mouse_genomes_project 4 13381421 13381528 + Gm24317 snRNA snRNA MGP_NODShiLtJ_T0065933.1 MGP_NODShiLtJ_G0028243.1 mouse_genomes_project 4 99924854 99926287 + MGP_NODShiLtJ_P0065933 protein_coding protein_coding MGP_NODShiLtJ_T0101918.1 MGP_NODShiLtJ_G0040086.1 mouse_genomes_project 4 108746923 108747101 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007847.1 MGP_NODShiLtJ_G0006411.1 mouse_genomes_project 4 116564319 116692626 + Gm12718 lincRNA lincRNA MGP_NODShiLtJ_T0007848.1 MGP_NODShiLtJ_G0006411.1 mouse_genomes_project 4 116564340 116692608 + Gm12718 lincRNA lincRNA MGP_NODShiLtJ_T0004395.1 MGP_NODShiLtJ_G0003827.1 mouse_genomes_project 4 50796511 50853327 - Gm12446 antisense antisense MGP_NODShiLtJ_T0004396.1 MGP_NODShiLtJ_G0003827.1 mouse_genomes_project 4 50828534 50855462 - Gm12446 antisense antisense MGP_NODShiLtJ_T0011451.1 MGP_NODShiLtJ_G0009584.1 mouse_genomes_project 4 37184182 37184489 + Gm22849 misc_RNA misc_RNA MGP_NODShiLtJ_T0068999.1 MGP_NODShiLtJ_G0028946.1 mouse_genomes_project 4 166805817 166858995 + MGP_NODShiLtJ_P0068999 Ctnnbip1 protein_coding protein_coding MGP_NODShiLtJ_T0069000.1 MGP_NODShiLtJ_G0028946.1 mouse_genomes_project 4 166837808 166857065 + MGP_NODShiLtJ_P0069000 Ctnnbip1 protein_coding protein_coding MGP_NODShiLtJ_T0066950.1 MGP_NODShiLtJ_G0028458.1 mouse_genomes_project 4 131528687 131536261 - Dmap1 protein_coding processed_transcript MGP_NODShiLtJ_T0066951.1 MGP_NODShiLtJ_G0028458.1 mouse_genomes_project 4 131528687 131536281 - MGP_NODShiLtJ_P0066951 Dmap1 protein_coding protein_coding MGP_NODShiLtJ_T0066952.1 MGP_NODShiLtJ_G0028458.1 mouse_genomes_project 4 131528692 131535991 - Dmap1 protein_coding processed_transcript MGP_NODShiLtJ_T0066953.1 MGP_NODShiLtJ_G0028458.1 mouse_genomes_project 4 131534927 131536229 - Dmap1 protein_coding processed_transcript MGP_NODShiLtJ_T0066954.1 MGP_NODShiLtJ_G0028458.1 mouse_genomes_project 4 131535309 131536219 - Dmap1 protein_coding processed_transcript MGP_NODShiLtJ_T0066955.1 MGP_NODShiLtJ_G0028458.1 mouse_genomes_project 4 131535594 131536279 - Dmap1 protein_coding processed_transcript MGP_NODShiLtJ_T0065866.1 MGP_NODShiLtJ_G0028222.1 mouse_genomes_project 4 97536287 97555208 - Plin2 protein_coding processed_transcript MGP_NODShiLtJ_T0065867.1 MGP_NODShiLtJ_G0028222.1 mouse_genomes_project 4 97536400 97571830 - MGP_NODShiLtJ_P0065867 Plin2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065868.1 MGP_NODShiLtJ_G0028222.1 mouse_genomes_project 4 97551350 97571837 - MGP_NODShiLtJ_P0065868 Plin2 protein_coding protein_coding MGP_NODShiLtJ_T0065869.1 MGP_NODShiLtJ_G0028222.1 mouse_genomes_project 4 97553680 97555673 - Plin2 protein_coding processed_transcript MGP_NODShiLtJ_T0065870.1 MGP_NODShiLtJ_G0028222.1 mouse_genomes_project 4 97556645 97567178 - MGP_NODShiLtJ_P0065870 Plin2 protein_coding protein_coding MGP_NODShiLtJ_T0065871.1 MGP_NODShiLtJ_G0028222.1 mouse_genomes_project 4 97558450 97571337 - MGP_NODShiLtJ_P0065871 Plin2 protein_coding protein_coding MGP_NODShiLtJ_T0065872.1 MGP_NODShiLtJ_G0028222.1 mouse_genomes_project 4 97558450 97571545 - MGP_NODShiLtJ_P0065872 Plin2 protein_coding protein_coding MGP_NODShiLtJ_T0065873.1 MGP_NODShiLtJ_G0028222.1 mouse_genomes_project 4 97569441 97571763 - Plin2 protein_coding processed_transcript MGP_NODShiLtJ_T0065927.1 MGP_NODShiLtJ_G0028237.1 mouse_genomes_project 4 99764680 99765614 - MGP_NODShiLtJ_P0065927 Ifna16 protein_coding protein_coding MGP_NODShiLtJ_T0065961.1 MGP_NODShiLtJ_G0028255.1 mouse_genomes_project 4 103850613 103853506 - MGP_NODShiLtJ_P0065961 Izumo3 protein_coding protein_coding MGP_NODShiLtJ_T0065962.1 MGP_NODShiLtJ_G0028255.1 mouse_genomes_project 4 103850622 103853519 - MGP_NODShiLtJ_P0065962 Izumo3 protein_coding protein_coding MGP_NODShiLtJ_T0068764.1 MGP_NODShiLtJ_G0028886.1 mouse_genomes_project 4 160516150 160523485 - MGP_NODShiLtJ_P0068764 protein_coding protein_coding MGP_NODShiLtJ_T0004451.1 MGP_NODShiLtJ_G0003866.1 mouse_genomes_project 4 128652949 128657110 + Cyp4x1os antisense antisense MGP_NODShiLtJ_T0014603.1 MGP_NODShiLtJ_G0012711.1 mouse_genomes_project 4 130812163 130812803 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007760.1 MGP_NODShiLtJ_G0006338.1 mouse_genomes_project 4 36591396 36596968 + Gm12753 lincRNA lincRNA MGP_NODShiLtJ_T0100565.1 MGP_NODShiLtJ_G0038959.1 mouse_genomes_project 4 115883460 115883588 + Gm24869 snoRNA snoRNA MGP_NODShiLtJ_T0068779.1 MGP_NODShiLtJ_G0028892.1 mouse_genomes_project 4 160991734 161016003 + MGP_NODShiLtJ_P0068779 protein_coding protein_coding MGP_NODShiLtJ_T0068491.1 MGP_NODShiLtJ_G0028809.1 mouse_genomes_project 4 154847910 154851591 - MGP_NODShiLtJ_P0068491 Gm13030 protein_coding protein_coding MGP_NODShiLtJ_T0067023.1 MGP_NODShiLtJ_G0028471.1 mouse_genomes_project 4 132270368 132318252 - MGP_NODShiLtJ_P0067023 Szt2 protein_coding protein_coding MGP_NODShiLtJ_T0067024.1 MGP_NODShiLtJ_G0028471.1 mouse_genomes_project 4 132270372 132283899 - MGP_NODShiLtJ_P0067024 Szt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067025.1 MGP_NODShiLtJ_G0028471.1 mouse_genomes_project 4 132271034 132272689 - Szt2 protein_coding processed_transcript MGP_NODShiLtJ_T0067026.1 MGP_NODShiLtJ_G0028471.1 mouse_genomes_project 4 132278314 132279201 - Szt2 protein_coding retained_intron MGP_NODShiLtJ_T0067027.1 MGP_NODShiLtJ_G0028471.1 mouse_genomes_project 4 132282297 132283450 - Szt2 protein_coding retained_intron MGP_NODShiLtJ_T0067028.1 MGP_NODShiLtJ_G0028471.1 mouse_genomes_project 4 132298930 132299734 - Szt2 protein_coding processed_transcript MGP_NODShiLtJ_T0010528.1 MGP_NODShiLtJ_G0008661.1 mouse_genomes_project 4 148678276 148678365 + Mir5122 miRNA miRNA MGP_NODShiLtJ_T0007777.1 MGP_NODShiLtJ_G0006354.1 mouse_genomes_project 4 58871365 58880242 - AI427809 lincRNA lincRNA MGP_NODShiLtJ_T0007778.1 MGP_NODShiLtJ_G0006354.1 mouse_genomes_project 4 58871902 58872557 - AI427809 lincRNA lincRNA MGP_NODShiLtJ_T0007779.1 MGP_NODShiLtJ_G0006354.1 mouse_genomes_project 4 58872464 58875502 - AI427809 lincRNA lincRNA MGP_NODShiLtJ_T0007780.1 MGP_NODShiLtJ_G0006354.1 mouse_genomes_project 4 58872741 58873841 - AI427809 lincRNA lincRNA MGP_NODShiLtJ_T0100523.1 MGP_NODShiLtJ_G0038917.1 mouse_genomes_project 4 36056321 36056446 - Gm24341 snoRNA snoRNA MGP_NODShiLtJ_T0066391.1 MGP_NODShiLtJ_G0028347.1 mouse_genomes_project 4 120925724 120927170 + Glis1 protein_coding processed_transcript MGP_NODShiLtJ_T0066392.1 MGP_NODShiLtJ_G0028347.1 mouse_genomes_project 4 120925750 121054419 + MGP_NODShiLtJ_P0066392 Glis1 protein_coding protein_coding MGP_NODShiLtJ_T0066393.1 MGP_NODShiLtJ_G0028347.1 mouse_genomes_project 4 120925852 121128592 + MGP_NODShiLtJ_P0066393 Glis1 protein_coding protein_coding MGP_NODShiLtJ_T0066394.1 MGP_NODShiLtJ_G0028347.1 mouse_genomes_project 4 120930131 121128592 + MGP_NODShiLtJ_P0066394 Glis1 protein_coding protein_coding MGP_NODShiLtJ_T0066395.1 MGP_NODShiLtJ_G0028347.1 mouse_genomes_project 4 121071705 121120999 + Glis1 protein_coding processed_transcript MGP_NODShiLtJ_T0066396.1 MGP_NODShiLtJ_G0028347.1 mouse_genomes_project 4 121108516 121125923 + Glis1 protein_coding processed_transcript MGP_NODShiLtJ_T0065317.1 MGP_NODShiLtJ_G0028081.1 mouse_genomes_project 4 53121785 53160216 - MGP_NODShiLtJ_P0065317 Tex10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065318.1 MGP_NODShiLtJ_G0028081.1 mouse_genomes_project 4 53121785 53168071 - MGP_NODShiLtJ_P0065318 Tex10 protein_coding protein_coding MGP_NODShiLtJ_T0065319.1 MGP_NODShiLtJ_G0028081.1 mouse_genomes_project 4 53121883 53168034 - MGP_NODShiLtJ_P0065319 Tex10 protein_coding protein_coding MGP_NODShiLtJ_T0065320.1 MGP_NODShiLtJ_G0028081.1 mouse_genomes_project 4 53149755 53150890 - Tex10 protein_coding retained_intron MGP_NODShiLtJ_T0065321.1 MGP_NODShiLtJ_G0028081.1 mouse_genomes_project 4 53158998 53164006 - Tex10 protein_coding processed_transcript MGP_NODShiLtJ_T0065322.1 MGP_NODShiLtJ_G0028081.1 mouse_genomes_project 4 53163218 53167955 - Tex10 protein_coding retained_intron MGP_NODShiLtJ_T0014616.1 MGP_NODShiLtJ_G0012724.1 mouse_genomes_project 4 133537754 133538436 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067241.1 MGP_NODShiLtJ_G0028534.1 mouse_genomes_project 4 137275956 137305864 - MGP_NODShiLtJ_P0067241 Cap1 protein_coding protein_coding MGP_NODShiLtJ_T0067242.1 MGP_NODShiLtJ_G0028534.1 mouse_genomes_project 4 137275956 137305997 - MGP_NODShiLtJ_P0067242 Cap1 protein_coding protein_coding MGP_NODShiLtJ_T0067243.1 MGP_NODShiLtJ_G0028534.1 mouse_genomes_project 4 137275956 137306009 - MGP_NODShiLtJ_P0067243 Cap1 protein_coding protein_coding MGP_NODShiLtJ_T0067244.1 MGP_NODShiLtJ_G0028534.1 mouse_genomes_project 4 137280190 137282406 - Cap1 protein_coding processed_transcript MGP_NODShiLtJ_T0067245.1 MGP_NODShiLtJ_G0028534.1 mouse_genomes_project 4 137285103 137305918 - MGP_NODShiLtJ_P0067245 Cap1 protein_coding protein_coding MGP_NODShiLtJ_T0067246.1 MGP_NODShiLtJ_G0028534.1 mouse_genomes_project 4 137288451 137305813 - Cap1 protein_coding processed_transcript MGP_NODShiLtJ_T0067247.1 MGP_NODShiLtJ_G0028534.1 mouse_genomes_project 4 137289542 137305817 - Cap1 protein_coding processed_transcript MGP_NODShiLtJ_T0064783.1 MGP_NODShiLtJ_G0027973.1 mouse_genomes_project 4 45447884 45494032 + MGP_NODShiLtJ_P0064783 Ubap1 protein_coding protein_coding MGP_NODShiLtJ_T0064784.1 MGP_NODShiLtJ_G0027973.1 mouse_genomes_project 4 45447884 45493273 + MGP_NODShiLtJ_P0064784 Ubap1 protein_coding protein_coding MGP_NODShiLtJ_T0064785.1 MGP_NODShiLtJ_G0027973.1 mouse_genomes_project 4 45447936 45472581 + Ubap1 protein_coding processed_transcript MGP_NODShiLtJ_T0064786.1 MGP_NODShiLtJ_G0027973.1 mouse_genomes_project 4 45472543 45482074 + Ubap1 protein_coding processed_transcript MGP_NODShiLtJ_T0064787.1 MGP_NODShiLtJ_G0027973.1 mouse_genomes_project 4 45473020 45492199 + MGP_NODShiLtJ_P0064787 Ubap1 protein_coding protein_coding MGP_NODShiLtJ_T0067196.1 MGP_NODShiLtJ_G0028519.1 mouse_genomes_project 4 134837493 134888538 - MGP_NODShiLtJ_P0067196 Kcnq4 protein_coding protein_coding MGP_NODShiLtJ_T0067197.1 MGP_NODShiLtJ_G0028519.1 mouse_genomes_project 4 134856571 134889879 - Kcnq4 protein_coding processed_transcript MGP_NODShiLtJ_T0001393.1 MGP_NODShiLtJ_G0001313.1 mouse_genomes_project 4 152322156 152324607 + TEC TEC MGP_NODShiLtJ_T0068134.1 MGP_NODShiLtJ_G0028724.1 mouse_genomes_project 4 149733529 149736523 - MGP_NODShiLtJ_P0068134 Grrp1 protein_coding protein_coding MGP_NODShiLtJ_T0068135.1 MGP_NODShiLtJ_G0028724.1 mouse_genomes_project 4 149734125 149735439 - Grrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0068004.1 MGP_NODShiLtJ_G0028696.1 mouse_genomes_project 4 148584286 148644705 - MGP_NODShiLtJ_P0068004 Wdtc1 protein_coding protein_coding MGP_NODShiLtJ_T0068005.1 MGP_NODShiLtJ_G0028696.1 mouse_genomes_project 4 148584286 148644681 - MGP_NODShiLtJ_P0068005 Wdtc1 protein_coding protein_coding MGP_NODShiLtJ_T0068006.1 MGP_NODShiLtJ_G0028696.1 mouse_genomes_project 4 148601292 148658264 - Wdtc1 protein_coding processed_transcript MGP_NODShiLtJ_T0068007.1 MGP_NODShiLtJ_G0028696.1 mouse_genomes_project 4 148606979 148615327 - Wdtc1 protein_coding processed_transcript MGP_NODShiLtJ_T0068008.1 MGP_NODShiLtJ_G0028696.1 mouse_genomes_project 4 148607604 148658837 - Wdtc1 protein_coding processed_transcript MGP_NODShiLtJ_T0069515.1 MGP_NODShiLtJ_G0029038.1 mouse_genomes_project 4 173740648 173745364 - MGP_NODShiLtJ_P0069515 Cptp protein_coding protein_coding MGP_NODShiLtJ_T0069516.1 MGP_NODShiLtJ_G0029038.1 mouse_genomes_project 4 173741223 173745286 - Cptp protein_coding processed_transcript MGP_NODShiLtJ_T0069517.1 MGP_NODShiLtJ_G0029038.1 mouse_genomes_project 4 173742290 173744742 - MGP_NODShiLtJ_P0069517 Cptp protein_coding protein_coding MGP_NODShiLtJ_T0014600.1 MGP_NODShiLtJ_G0012708.1 mouse_genomes_project 4 130640367 130640814 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068770.1 MGP_NODShiLtJ_G0028889.1 mouse_genomes_project 4 160571390 160572625 - MGP_NODShiLtJ_P0068770 protein_coding protein_coding MGP_NODShiLtJ_T0064689.1 MGP_NODShiLtJ_G0027951.1 mouse_genomes_project 4 37783421 37823098 - MGP_NODShiLtJ_P0064689 3110043O21Rik protein_coding protein_coding MGP_NODShiLtJ_T0064690.1 MGP_NODShiLtJ_G0027951.1 mouse_genomes_project 4 37783423 37822809 - MGP_NODShiLtJ_P0064690 3110043O21Rik protein_coding protein_coding MGP_NODShiLtJ_T0064691.1 MGP_NODShiLtJ_G0027951.1 mouse_genomes_project 4 37783423 37822855 - MGP_NODShiLtJ_P0064691 3110043O21Rik protein_coding protein_coding MGP_NODShiLtJ_T0064692.1 MGP_NODShiLtJ_G0027951.1 mouse_genomes_project 4 37789137 37804473 - 3110043O21Rik protein_coding retained_intron MGP_NODShiLtJ_T0064693.1 MGP_NODShiLtJ_G0027951.1 mouse_genomes_project 4 37809315 37823150 - 3110043O21Rik protein_coding retained_intron MGP_NODShiLtJ_T0064694.1 MGP_NODShiLtJ_G0027951.1 mouse_genomes_project 4 37815371 37823098 - 3110043O21Rik protein_coding processed_transcript MGP_NODShiLtJ_T0064695.1 MGP_NODShiLtJ_G0027951.1 mouse_genomes_project 4 37815555 37823098 - 3110043O21Rik protein_coding processed_transcript MGP_NODShiLtJ_T0068039.1 MGP_NODShiLtJ_G0028707.1 mouse_genomes_project 4 149022249 149099004 - MGP_NODShiLtJ_P0068039 Arid1a protein_coding protein_coding MGP_NODShiLtJ_T0068040.1 MGP_NODShiLtJ_G0028707.1 mouse_genomes_project 4 149022249 149099004 - MGP_NODShiLtJ_P0068040 Arid1a protein_coding protein_coding MGP_NODShiLtJ_T0068041.1 MGP_NODShiLtJ_G0028707.1 mouse_genomes_project 4 149023182 149103085 - MGP_NODShiLtJ_P0068041 Arid1a protein_coding protein_coding MGP_NODShiLtJ_T0068042.1 MGP_NODShiLtJ_G0028707.1 mouse_genomes_project 4 149032769 149065837 - Arid1a protein_coding retained_intron MGP_NODShiLtJ_T0068043.1 MGP_NODShiLtJ_G0028707.1 mouse_genomes_project 4 149062145 149063558 - Arid1a protein_coding retained_intron MGP_NODShiLtJ_T0068044.1 MGP_NODShiLtJ_G0028707.1 mouse_genomes_project 4 149063560 149066667 - MGP_NODShiLtJ_P0068044 Arid1a protein_coding protein_coding MGP_NODShiLtJ_T0100532.1 MGP_NODShiLtJ_G0038926.1 mouse_genomes_project 4 48754066 48754193 - Gm24376 snoRNA snoRNA MGP_NODShiLtJ_T0099304.1 MGP_NODShiLtJ_G0037698.1 mouse_genomes_project 4 140984669 140984766 - Gm25323 snRNA snRNA MGP_NODShiLtJ_T0066139.1 MGP_NODShiLtJ_G0028298.1 mouse_genomes_project 4 114053902 114136475 + MGP_NODShiLtJ_P0066139 Raver2 protein_coding protein_coding MGP_NODShiLtJ_T0066140.1 MGP_NODShiLtJ_G0028298.1 mouse_genomes_project 4 114053902 114119463 + MGP_NODShiLtJ_P0066140 Raver2 protein_coding protein_coding MGP_NODShiLtJ_T0066141.1 MGP_NODShiLtJ_G0028298.1 mouse_genomes_project 4 114054398 114089836 + Raver2 protein_coding processed_transcript MGP_NODShiLtJ_T0004382.1 MGP_NODShiLtJ_G0003816.1 mouse_genomes_project 4 45751710 45753749 + Gm12406 antisense antisense MGP_NODShiLtJ_T0066106.1 MGP_NODShiLtJ_G0028287.1 mouse_genomes_project 4 112088300 112156841 + MGP_NODShiLtJ_P0066106 Atg4c protein_coding protein_coding MGP_NODShiLtJ_T0066107.1 MGP_NODShiLtJ_G0028287.1 mouse_genomes_project 4 112088513 112156837 + MGP_NODShiLtJ_P0066107 Atg4c protein_coding protein_coding MGP_NODShiLtJ_T0066108.1 MGP_NODShiLtJ_G0028287.1 mouse_genomes_project 4 112114755 112120797 + Atg4c protein_coding processed_transcript MGP_NODShiLtJ_T0069579.1 MGP_NODShiLtJ_G0029049.1 mouse_genomes_project 4 174008745 174027213 + MGP_NODShiLtJ_P0069579 9430015G10Rik protein_coding protein_coding MGP_NODShiLtJ_T0069580.1 MGP_NODShiLtJ_G0029049.1 mouse_genomes_project 4 174008748 174027213 + 9430015G10Rik protein_coding processed_transcript MGP_NODShiLtJ_T0069581.1 MGP_NODShiLtJ_G0029049.1 mouse_genomes_project 4 174008761 174027211 + MGP_NODShiLtJ_P0069581 9430015G10Rik protein_coding protein_coding MGP_NODShiLtJ_T0069582.1 MGP_NODShiLtJ_G0029049.1 mouse_genomes_project 4 174008762 174026166 + MGP_NODShiLtJ_P0069582 9430015G10Rik protein_coding protein_coding MGP_NODShiLtJ_T0069583.1 MGP_NODShiLtJ_G0029049.1 mouse_genomes_project 4 174008782 174022126 + 9430015G10Rik protein_coding processed_transcript MGP_NODShiLtJ_T0069584.1 MGP_NODShiLtJ_G0029049.1 mouse_genomes_project 4 174008793 174022360 + 9430015G10Rik protein_coding processed_transcript MGP_NODShiLtJ_T0069585.1 MGP_NODShiLtJ_G0029049.1 mouse_genomes_project 4 174008802 174015652 + 9430015G10Rik protein_coding processed_transcript MGP_NODShiLtJ_T0069586.1 MGP_NODShiLtJ_G0029049.1 mouse_genomes_project 4 174012657 174019465 + 9430015G10Rik protein_coding processed_transcript MGP_NODShiLtJ_T0065678.1 MGP_NODShiLtJ_G0028185.1 mouse_genomes_project 4 71873822 72127043 + MGP_NODShiLtJ_P0065678 protein_coding protein_coding MGP_NODShiLtJ_T0098037.1 MGP_NODShiLtJ_G0036449.1 mouse_genomes_project 4 107540061 107540175 + n-R5s189 rRNA rRNA MGP_NODShiLtJ_T0069190.1 MGP_NODShiLtJ_G0028982.1 mouse_genomes_project 4 169863710 169873605 + MGP_NODShiLtJ_P0069190 Icmt protein_coding protein_coding MGP_NODShiLtJ_T0069191.1 MGP_NODShiLtJ_G0028982.1 mouse_genomes_project 4 169863787 169873604 + MGP_NODShiLtJ_P0069191 Icmt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069192.1 MGP_NODShiLtJ_G0028982.1 mouse_genomes_project 4 169864139 169867238 + Icmt protein_coding processed_transcript MGP_NODShiLtJ_T0069193.1 MGP_NODShiLtJ_G0028982.1 mouse_genomes_project 4 169871870 169873552 + Icmt protein_coding processed_transcript MGP_NODShiLtJ_T0098382.1 MGP_NODShiLtJ_G0036787.1 mouse_genomes_project 4 113035688 113036909 + Gm12701 sense_intronic sense_intronic MGP_NODShiLtJ_T0064496.1 MGP_NODShiLtJ_G0027906.1 mouse_genomes_project 4 21341452 21358704 + Usp45 protein_coding processed_transcript MGP_NODShiLtJ_T0064497.1 MGP_NODShiLtJ_G0027906.1 mouse_genomes_project 4 21352484 21361052 + Usp45 protein_coding retained_intron MGP_NODShiLtJ_T0064498.1 MGP_NODShiLtJ_G0027906.1 mouse_genomes_project 4 21352495 21418411 + MGP_NODShiLtJ_P0064498 Usp45 protein_coding protein_coding MGP_NODShiLtJ_T0064499.1 MGP_NODShiLtJ_G0027906.1 mouse_genomes_project 4 21352495 21418413 + MGP_NODShiLtJ_P0064499 Usp45 protein_coding protein_coding MGP_NODShiLtJ_T0064500.1 MGP_NODShiLtJ_G0027906.1 mouse_genomes_project 4 21352504 21376853 + MGP_NODShiLtJ_P0064500 Usp45 protein_coding protein_coding MGP_NODShiLtJ_T0064501.1 MGP_NODShiLtJ_G0027906.1 mouse_genomes_project 4 21352521 21418413 + MGP_NODShiLtJ_P0064501 Usp45 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064502.1 MGP_NODShiLtJ_G0027906.1 mouse_genomes_project 4 21357964 21418411 + MGP_NODShiLtJ_P0064502 Usp45 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064503.1 MGP_NODShiLtJ_G0027906.1 mouse_genomes_project 4 21360935 21395362 + MGP_NODShiLtJ_P0064503 Usp45 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067870.1 MGP_NODShiLtJ_G0028666.1 mouse_genomes_project 4 147202663 147204959 + MGP_NODShiLtJ_P0067870 Gm10300 protein_coding protein_coding MGP_NODShiLtJ_T0065484.1 MGP_NODShiLtJ_G0028131.1 mouse_genomes_project 4 64280642 64380112 + MGP_NODShiLtJ_P0065484 Musk protein_coding protein_coding MGP_NODShiLtJ_T0065485.1 MGP_NODShiLtJ_G0028131.1 mouse_genomes_project 4 64280644 64380113 + MGP_NODShiLtJ_P0065485 Musk protein_coding protein_coding MGP_NODShiLtJ_T0065486.1 MGP_NODShiLtJ_G0028131.1 mouse_genomes_project 4 64280644 64380112 + MGP_NODShiLtJ_P0065486 Musk protein_coding protein_coding MGP_NODShiLtJ_T0065487.1 MGP_NODShiLtJ_G0028131.1 mouse_genomes_project 4 64280644 64380113 + MGP_NODShiLtJ_P0065487 Musk protein_coding protein_coding MGP_NODShiLtJ_T0065488.1 MGP_NODShiLtJ_G0028131.1 mouse_genomes_project 4 64280644 64380112 + MGP_NODShiLtJ_P0065488 Musk protein_coding protein_coding MGP_NODShiLtJ_T0065489.1 MGP_NODShiLtJ_G0028131.1 mouse_genomes_project 4 64280644 64380112 + MGP_NODShiLtJ_P0065489 Musk protein_coding protein_coding MGP_NODShiLtJ_T0065490.1 MGP_NODShiLtJ_G0028131.1 mouse_genomes_project 4 64280644 64380113 + MGP_NODShiLtJ_P0065490 Musk protein_coding protein_coding MGP_NODShiLtJ_T0065491.1 MGP_NODShiLtJ_G0028131.1 mouse_genomes_project 4 64280850 64300080 + Musk protein_coding processed_transcript MGP_NODShiLtJ_T0004487.1 MGP_NODShiLtJ_G0003895.1 mouse_genomes_project 4 145852737 145853447 - Gm12970 antisense antisense MGP_NODShiLtJ_T0004536.1 MGP_NODShiLtJ_G0003933.1 mouse_genomes_project 4 166613119 166613562 + Ube4bos2 antisense antisense MGP_NODShiLtJ_T0067655.1 MGP_NODShiLtJ_G0028632.1 mouse_genomes_project 4 144629299 144640546 - MGP_NODShiLtJ_P0067655 Lck protein_coding protein_coding MGP_NODShiLtJ_T0067656.1 MGP_NODShiLtJ_G0028632.1 mouse_genomes_project 4 144629304 144656931 - MGP_NODShiLtJ_P0067656 Lck protein_coding protein_coding MGP_NODShiLtJ_T0067657.1 MGP_NODShiLtJ_G0028632.1 mouse_genomes_project 4 144629304 144640565 - MGP_NODShiLtJ_P0067657 Lck protein_coding protein_coding MGP_NODShiLtJ_T0067658.1 MGP_NODShiLtJ_G0028632.1 mouse_genomes_project 4 144629850 144637989 - Lck protein_coding retained_intron MGP_NODShiLtJ_T0067659.1 MGP_NODShiLtJ_G0028632.1 mouse_genomes_project 4 144632984 144638372 - Lck protein_coding retained_intron MGP_NODShiLtJ_T0067660.1 MGP_NODShiLtJ_G0028632.1 mouse_genomes_project 4 144637616 144638602 - Lck protein_coding retained_intron MGP_NODShiLtJ_T0067661.1 MGP_NODShiLtJ_G0028632.1 mouse_genomes_project 4 144639036 144640261 - Lck protein_coding retained_intron MGP_NODShiLtJ_T0067662.1 MGP_NODShiLtJ_G0028632.1 mouse_genomes_project 4 144639538 144640546 - MGP_NODShiLtJ_P0067662 Lck protein_coding protein_coding MGP_NODShiLtJ_T0004361.1 MGP_NODShiLtJ_G0003798.1 mouse_genomes_project 4 3319032 3326906 - 4930430E12Rik antisense antisense MGP_NODShiLtJ_T0010542.1 MGP_NODShiLtJ_G0008675.1 mouse_genomes_project 4 156040891 156040986 - Mir2139 miRNA miRNA MGP_NODShiLtJ_T0068701.1 MGP_NODShiLtJ_G0028862.1 mouse_genomes_project 4 158054823 158084999 - MGP_NODShiLtJ_P0068701 Dnajc16 protein_coding protein_coding MGP_NODShiLtJ_T0068702.1 MGP_NODShiLtJ_G0028862.1 mouse_genomes_project 4 158063014 158068784 - Dnajc16 protein_coding processed_transcript MGP_NODShiLtJ_T0068703.1 MGP_NODShiLtJ_G0028862.1 mouse_genomes_project 4 158077161 158085039 - MGP_NODShiLtJ_P0068703 Dnajc16 protein_coding protein_coding MGP_NODShiLtJ_T0017936.1 MGP_NODShiLtJ_G0015439.1 mouse_genomes_project 4 137391917 137394060 + 4933421A08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0065928.1 MGP_NODShiLtJ_G0028238.1 mouse_genomes_project 4 99764976 99765546 - MGP_NODShiLtJ_P0065928 protein_coding protein_coding MGP_NODShiLtJ_T0065541.1 MGP_NODShiLtJ_G0028144.1 mouse_genomes_project 4 65718472 65755305 + MGP_NODShiLtJ_P0065541 Hsdl2 protein_coding protein_coding MGP_NODShiLtJ_T0065542.1 MGP_NODShiLtJ_G0028144.1 mouse_genomes_project 4 65718554 65755304 + MGP_NODShiLtJ_P0065542 Hsdl2 protein_coding protein_coding MGP_NODShiLtJ_T0065543.1 MGP_NODShiLtJ_G0028144.1 mouse_genomes_project 4 65731102 65738243 + MGP_NODShiLtJ_P0065543 Hsdl2 protein_coding protein_coding MGP_NODShiLtJ_T0100528.1 MGP_NODShiLtJ_G0038922.1 mouse_genomes_project 4 45285614 45285691 - Gm22888 snoRNA snoRNA MGP_NODShiLtJ_T0007814.1 MGP_NODShiLtJ_G0006383.1 mouse_genomes_project 4 94009758 94019799 + Gm11184 lincRNA lincRNA MGP_NODShiLtJ_T0069189.1 MGP_NODShiLtJ_G0028981.1 mouse_genomes_project 4 169850973 169852146 - MGP_NODShiLtJ_P0069189 Hes3 protein_coding protein_coding MGP_NODShiLtJ_T0068465.1 MGP_NODShiLtJ_G0028802.1 mouse_genomes_project 4 154391418 154399568 + MGP_NODShiLtJ_P0068465 Camk2n1 protein_coding protein_coding MGP_NODShiLtJ_T0098381.1 MGP_NODShiLtJ_G0036786.1 mouse_genomes_project 4 107633280 107640631 + Gm28096 sense_intronic sense_intronic MGP_NODShiLtJ_T0007732.1 MGP_NODShiLtJ_G0006315.1 mouse_genomes_project 4 4705111 4720883 + 8430436N08Rik lincRNA lincRNA MGP_NODShiLtJ_T0065028.1 MGP_NODShiLtJ_G0028018.1 mouse_genomes_project 4 47824513 47837162 - Gba2 protein_coding retained_intron MGP_NODShiLtJ_T0065029.1 MGP_NODShiLtJ_G0028018.1 mouse_genomes_project 4 47824513 47836714 - Gba2 protein_coding retained_intron MGP_NODShiLtJ_T0065030.1 MGP_NODShiLtJ_G0028018.1 mouse_genomes_project 4 47824513 47837498 - MGP_NODShiLtJ_P0065030 Gba2 protein_coding protein_coding MGP_NODShiLtJ_T0065031.1 MGP_NODShiLtJ_G0028018.1 mouse_genomes_project 4 47824514 47836714 - Gba2 protein_coding retained_intron MGP_NODShiLtJ_T0065032.1 MGP_NODShiLtJ_G0028018.1 mouse_genomes_project 4 47825979 47827228 - Gba2 protein_coding retained_intron MGP_NODShiLtJ_T0065033.1 MGP_NODShiLtJ_G0028018.1 mouse_genomes_project 4 47827948 47831654 - Gba2 protein_coding processed_transcript MGP_NODShiLtJ_T0065034.1 MGP_NODShiLtJ_G0028018.1 mouse_genomes_project 4 47828361 47837261 - MGP_NODShiLtJ_P0065034 Gba2 protein_coding protein_coding MGP_NODShiLtJ_T0014674.1 MGP_NODShiLtJ_G0012782.1 mouse_genomes_project 4 151467605 151468101 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004455.1 MGP_NODShiLtJ_G0003870.1 mouse_genomes_project 4 130799289 130800136 - 1700021J08Rik antisense antisense MGP_NODShiLtJ_T0064782.1 MGP_NODShiLtJ_G0027972.1 mouse_genomes_project 4 45379674 45404919 - MGP_NODShiLtJ_P0064782 Dcaf12 protein_coding protein_coding MGP_NODShiLtJ_T0004448.1 MGP_NODShiLtJ_G0003864.1 mouse_genomes_project 4 123748223 123749298 - Dmrta2os antisense antisense MGP_NODShiLtJ_T0004449.1 MGP_NODShiLtJ_G0003864.1 mouse_genomes_project 4 123748232 123748976 - Dmrta2os antisense antisense MGP_NODShiLtJ_T0068870.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165276741 165285098 - MGP_NODShiLtJ_P0068870 Fbxo44 protein_coding protein_coding MGP_NODShiLtJ_T0068871.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165276744 165285597 - MGP_NODShiLtJ_P0068871 Fbxo44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068872.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165276744 165285586 - MGP_NODShiLtJ_P0068872 Fbxo44 protein_coding protein_coding MGP_NODShiLtJ_T0068873.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165277208 165285379 - MGP_NODShiLtJ_P0068873 Fbxo44 protein_coding protein_coding MGP_NODShiLtJ_T0068874.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165277478 165284102 - MGP_NODShiLtJ_P0068874 Fbxo44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068875.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165277513 165285152 - MGP_NODShiLtJ_P0068875 Fbxo44 protein_coding protein_coding MGP_NODShiLtJ_T0068876.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165277513 165285377 - MGP_NODShiLtJ_P0068876 Fbxo44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068877.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165279445 165285353 - MGP_NODShiLtJ_P0068877 Fbxo44 protein_coding protein_coding MGP_NODShiLtJ_T0068878.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165280095 165285351 - MGP_NODShiLtJ_P0068878 Fbxo44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068879.1 MGP_NODShiLtJ_G0028924.1 mouse_genomes_project 4 165280115 165285985 - MGP_NODShiLtJ_P0068879 Fbxo44 protein_coding protein_coding MGP_NODShiLtJ_T0069086.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168386226 168408351 + MGP_NODShiLtJ_P0069086 Tnfrsf9 protein_coding protein_coding MGP_NODShiLtJ_T0069088.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168392663 168421597 + MGP_NODShiLtJ_P0069088 Tnfrsf9 protein_coding protein_coding MGP_NODShiLtJ_T0069089.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168392698 168421597 + MGP_NODShiLtJ_P0069089 Tnfrsf9 protein_coding protein_coding MGP_NODShiLtJ_T0069090.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168397805 168420744 + MGP_NODShiLtJ_P0069090 Tnfrsf9 protein_coding protein_coding MGP_NODShiLtJ_T0069091.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168401858 168408342 + MGP_NODShiLtJ_P0069091 Tnfrsf9 protein_coding protein_coding MGP_NODShiLtJ_T0069092.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168401939 168403888 + Tnfrsf9 protein_coding processed_transcript MGP_NODShiLtJ_T0069093.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168401939 168421597 + MGP_NODShiLtJ_P0069093 Tnfrsf9 protein_coding protein_coding MGP_NODShiLtJ_T0069094.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168403615 168420589 + MGP_NODShiLtJ_P0069094 Tnfrsf9 protein_coding protein_coding MGP_NODShiLtJ_T0069095.1 MGP_NODShiLtJ_G0028962.1 mouse_genomes_project 4 168403736 168409496 + MGP_NODShiLtJ_P0069095 Tnfrsf9 protein_coding protein_coding MGP_NODShiLtJ_T0065362.1 MGP_NODShiLtJ_G0028095.1 mouse_genomes_project 4 54520704 54523991 - MGP_NODShiLtJ_P0065362 Ppp3r2 protein_coding protein_coding MGP_NODShiLtJ_T0065344.1 MGP_NODShiLtJ_G0028091.1 mouse_genomes_project 4 54365332 54378875 - MGP_NODShiLtJ_P0065344 Aldob protein_coding protein_coding MGP_NODShiLtJ_T0065345.1 MGP_NODShiLtJ_G0028091.1 mouse_genomes_project 4 54366371 54368204 - Aldob protein_coding processed_transcript MGP_NODShiLtJ_T0065346.1 MGP_NODShiLtJ_G0028091.1 mouse_genomes_project 4 54367874 54369224 - Aldob protein_coding processed_transcript MGP_NODShiLtJ_T0099274.1 MGP_NODShiLtJ_G0037668.1 mouse_genomes_project 4 96890579 96890680 - Gm25811 snRNA snRNA MGP_NODShiLtJ_T0065935.1 MGP_NODShiLtJ_G0028245.1 mouse_genomes_project 4 99943765 99944335 + MGP_NODShiLtJ_P0065935 Ifna5 protein_coding protein_coding MGP_NODShiLtJ_T0010505.1 MGP_NODShiLtJ_G0008638.1 mouse_genomes_project 4 114344301 114344384 - Mir101a miRNA miRNA MGP_NODShiLtJ_T0068808.1 MGP_NODShiLtJ_G0028907.1 mouse_genomes_project 4 161956037 161989385 - MGP_NODShiLtJ_P0068808 Tnfrsf1b protein_coding protein_coding MGP_NODShiLtJ_T0068809.1 MGP_NODShiLtJ_G0028907.1 mouse_genomes_project 4 161967913 161989385 - MGP_NODShiLtJ_P0068809 Tnfrsf1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004366.1 MGP_NODShiLtJ_G0003802.1 mouse_genomes_project 4 8993530 8994909 - Gm11831 antisense antisense MGP_NODShiLtJ_T0007752.1 MGP_NODShiLtJ_G0006330.1 mouse_genomes_project 4 22687684 22698106 - 1700025O08Rik lincRNA lincRNA MGP_NODShiLtJ_T0065557.1 MGP_NODShiLtJ_G0028151.1 mouse_genomes_project 4 68223254 68388946 - MGP_NODShiLtJ_P0065557 Mup5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065558.1 MGP_NODShiLtJ_G0028151.1 mouse_genomes_project 4 68224166 68229134 - MGP_NODShiLtJ_P0065558 Mup5 protein_coding protein_coding MGP_NODShiLtJ_T0067266.1 MGP_NODShiLtJ_G0028540.1 mouse_genomes_project 4 137652021 137663486 + MGP_NODShiLtJ_P0067266 Hpcal4 protein_coding protein_coding MGP_NODShiLtJ_T0067267.1 MGP_NODShiLtJ_G0028540.1 mouse_genomes_project 4 137652033 137660298 + MGP_NODShiLtJ_P0067267 Hpcal4 protein_coding protein_coding MGP_NODShiLtJ_T0067268.1 MGP_NODShiLtJ_G0028540.1 mouse_genomes_project 4 137652293 137657583 + MGP_NODShiLtJ_P0067268 Hpcal4 protein_coding protein_coding MGP_NODShiLtJ_T0067269.1 MGP_NODShiLtJ_G0028540.1 mouse_genomes_project 4 137652310 137652946 + Hpcal4 protein_coding processed_transcript MGP_NODShiLtJ_T0067270.1 MGP_NODShiLtJ_G0028540.1 mouse_genomes_project 4 137652523 137659529 + MGP_NODShiLtJ_P0067270 Hpcal4 protein_coding protein_coding MGP_NODShiLtJ_T0067881.1 MGP_NODShiLtJ_G0028670.1 mouse_genomes_project 4 147425428 147449896 + MGP_NODShiLtJ_P0067881 Taf12 protein_coding protein_coding MGP_NODShiLtJ_T0067882.1 MGP_NODShiLtJ_G0028670.1 mouse_genomes_project 4 147425466 147429254 + Taf12 protein_coding processed_transcript MGP_NODShiLtJ_T0067883.1 MGP_NODShiLtJ_G0028670.1 mouse_genomes_project 4 147425469 147446842 + MGP_NODShiLtJ_P0067883 Taf12 protein_coding protein_coding MGP_NODShiLtJ_T0069264.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171764257 171769404 - MGP_NODShiLtJ_P0069264 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069265.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171764375 171769700 - MGP_NODShiLtJ_P0069265 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069266.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171764375 171769754 - MGP_NODShiLtJ_P0069266 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069267.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171765243 171770018 - MGP_NODShiLtJ_P0069267 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069268.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171765248 171769940 - MGP_NODShiLtJ_P0069268 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069269.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171767097 171769724 - MGP_NODShiLtJ_P0069269 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069270.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171767097 171769655 - MGP_NODShiLtJ_P0069270 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069271.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171767097 171769404 - MGP_NODShiLtJ_P0069271 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069272.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171767098 171768143 - MGP_NODShiLtJ_P0069272 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069273.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171767098 171769938 - MGP_NODShiLtJ_P0069273 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069274.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171767368 171769825 - MGP_NODShiLtJ_P0069274 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069275.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171767486 171769451 - MGP_NODShiLtJ_P0069275 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069276.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171767511 171768111 - MGP_NODShiLtJ_P0069276 Smim1 protein_coding protein_coding MGP_NODShiLtJ_T0069277.1 MGP_NODShiLtJ_G0028993.1 mouse_genomes_project 4 171769093 171769700 - Smim1 protein_coding processed_transcript MGP_NODShiLtJ_T0001378.1 MGP_NODShiLtJ_G0001298.1 mouse_genomes_project 4 22061134 22066102 + TEC TEC MGP_NODShiLtJ_T0069435.1 MGP_NODShiLtJ_G0029021.1 mouse_genomes_project 4 173445809 173467271 + MGP_NODShiLtJ_P0069435 Slc35e2 protein_coding protein_coding MGP_NODShiLtJ_T0069436.1 MGP_NODShiLtJ_G0029021.1 mouse_genomes_project 4 173446004 173464026 + MGP_NODShiLtJ_P0069436 Slc35e2 protein_coding protein_coding MGP_NODShiLtJ_T0069437.1 MGP_NODShiLtJ_G0029021.1 mouse_genomes_project 4 173446335 173463255 + MGP_NODShiLtJ_P0069437 Slc35e2 protein_coding protein_coding MGP_NODShiLtJ_T0069438.1 MGP_NODShiLtJ_G0029021.1 mouse_genomes_project 4 173454575 173463132 + Slc35e2 protein_coding processed_transcript MGP_NODShiLtJ_T0014619.1 MGP_NODShiLtJ_G0012727.1 mouse_genomes_project 4 133582125 133582502 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065993.1 MGP_NODShiLtJ_G0028264.1 mouse_genomes_project 4 107524145 107527333 - MGP_NODShiLtJ_P0065993 Jun protein_coding protein_coding MGP_NODShiLtJ_T0067073.1 MGP_NODShiLtJ_G0028490.1 mouse_genomes_project 4 132911967 132912915 - MGP_NODShiLtJ_P0067073 protein_coding protein_coding MGP_NODShiLtJ_T0014604.1 MGP_NODShiLtJ_G0012712.1 mouse_genomes_project 4 130972753 130972957 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004454.1 MGP_NODShiLtJ_G0003869.1 mouse_genomes_project 4 130607790 130614596 + Gm12996 antisense antisense MGP_NODShiLtJ_T0065407.1 MGP_NODShiLtJ_G0028110.1 mouse_genomes_project 4 59456438 59501965 + MGP_NODShiLtJ_P0065407 Tmem38b protein_coding protein_coding MGP_NODShiLtJ_T0065408.1 MGP_NODShiLtJ_G0028110.1 mouse_genomes_project 4 59456448 59467800 + Tmem38b protein_coding processed_transcript MGP_NODShiLtJ_T0065409.1 MGP_NODShiLtJ_G0028110.1 mouse_genomes_project 4 59456450 59482899 + Tmem38b protein_coding processed_transcript MGP_NODShiLtJ_T0065410.1 MGP_NODShiLtJ_G0028110.1 mouse_genomes_project 4 59475524 59494993 + MGP_NODShiLtJ_P0065410 Tmem38b protein_coding protein_coding MGP_NODShiLtJ_T0064972.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47687930 47696253 - MGP_NODShiLtJ_P0064972 Cd72 protein_coding protein_coding MGP_NODShiLtJ_T0064973.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47689195 47696254 - MGP_NODShiLtJ_P0064973 Cd72 protein_coding protein_coding MGP_NODShiLtJ_T0064974.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47689195 47696210 - MGP_NODShiLtJ_P0064974 Cd72 protein_coding protein_coding MGP_NODShiLtJ_T0064975.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47689195 47696189 - MGP_NODShiLtJ_P0064975 Cd72 protein_coding protein_coding MGP_NODShiLtJ_T0064976.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47689206 47696252 - MGP_NODShiLtJ_P0064976 Cd72 protein_coding protein_coding MGP_NODShiLtJ_T0064977.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47689501 47691394 - Cd72 protein_coding retained_intron MGP_NODShiLtJ_T0064978.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47691296 47694002 - Cd72 protein_coding retained_intron MGP_NODShiLtJ_T0064979.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47693939 47696238 - Cd72 protein_coding retained_intron MGP_NODShiLtJ_T0064980.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47693950 47695949 - Cd72 protein_coding processed_transcript MGP_NODShiLtJ_T0064981.1 MGP_NODShiLtJ_G0028010.1 mouse_genomes_project 4 47694230 47696252 - Cd72 protein_coding processed_transcript MGP_NODShiLtJ_T0065207.1 MGP_NODShiLtJ_G0028054.1 mouse_genomes_project 4 50269506 50290160 - MGP_NODShiLtJ_P0065207 Igfbpl1 protein_coding protein_coding MGP_NODShiLtJ_T0065208.1 MGP_NODShiLtJ_G0028054.1 mouse_genomes_project 4 50274362 50277719 - Igfbpl1 protein_coding processed_transcript MGP_NODShiLtJ_T0064467.1 MGP_NODShiLtJ_G0027895.1 mouse_genomes_project 4 18792672 18816378 + MGP_NODShiLtJ_P0064467 Rmdn1 protein_coding protein_coding MGP_NODShiLtJ_T0064468.1 MGP_NODShiLtJ_G0027895.1 mouse_genomes_project 4 18792717 18836896 + MGP_NODShiLtJ_P0064468 Rmdn1 protein_coding protein_coding MGP_NODShiLtJ_T0004474.1 MGP_NODShiLtJ_G0003885.1 mouse_genomes_project 4 139178863 139316644 - Gm27247 antisense antisense MGP_NODShiLtJ_T0007965.1 MGP_NODShiLtJ_G0006497.1 mouse_genomes_project 4 171638905 171640186 + Gm13115 lincRNA lincRNA MGP_NODShiLtJ_T0014691.1 MGP_NODShiLtJ_G0012799.1 mouse_genomes_project 4 159557532 159557997 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014532.1 MGP_NODShiLtJ_G0012640.1 mouse_genomes_project 4 105269245 105272172 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001375.1 MGP_NODShiLtJ_G0001295.1 mouse_genomes_project 4 5642742 5655566 - TEC TEC MGP_NODShiLtJ_T0014599.1 MGP_NODShiLtJ_G0012707.1 mouse_genomes_project 4 130181592 130182009 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065943.1 MGP_NODShiLtJ_G0028251.1 mouse_genomes_project 4 100480149 100484918 - MGP_NODShiLtJ_P0065943 Cdkn2b protein_coding protein_coding MGP_NODShiLtJ_T0014407.1 MGP_NODShiLtJ_G0012515.1 mouse_genomes_project 4 50934898 50935221 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099322.1 MGP_NODShiLtJ_G0037716.1 mouse_genomes_project 4 165596645 165596797 - Gm23303 snRNA snRNA MGP_NODShiLtJ_T0010551.1 MGP_NODShiLtJ_G0008684.1 mouse_genomes_project 4 170635534 170635629 - Gm25779 miRNA miRNA MGP_NODShiLtJ_T0065941.1 MGP_NODShiLtJ_G0028250.1 mouse_genomes_project 4 100444075 100452487 - MGP_NODShiLtJ_P0065941 Cdkn2a protein_coding protein_coding MGP_NODShiLtJ_T0065942.1 MGP_NODShiLtJ_G0028250.1 mouse_genomes_project 4 100444145 100465490 - MGP_NODShiLtJ_P0065942 Cdkn2a protein_coding protein_coding MGP_NODShiLtJ_T0064587.1 MGP_NODShiLtJ_G0027924.1 mouse_genomes_project 4 34868786 34886714 + Casp8ap2 protein_coding processed_transcript MGP_NODShiLtJ_T0064588.1 MGP_NODShiLtJ_G0027924.1 mouse_genomes_project 4 34868805 34894734 + Casp8ap2 protein_coding processed_transcript MGP_NODShiLtJ_T0064589.1 MGP_NODShiLtJ_G0027924.1 mouse_genomes_project 4 34868808 34908455 + MGP_NODShiLtJ_P0064589 Casp8ap2 protein_coding protein_coding MGP_NODShiLtJ_T0064590.1 MGP_NODShiLtJ_G0027924.1 mouse_genomes_project 4 34868813 34908455 + MGP_NODShiLtJ_P0064590 Casp8ap2 protein_coding protein_coding MGP_NODShiLtJ_T0064591.1 MGP_NODShiLtJ_G0027924.1 mouse_genomes_project 4 34878984 34908455 + MGP_NODShiLtJ_P0064591 Casp8ap2 protein_coding protein_coding MGP_NODShiLtJ_T0010544.1 MGP_NODShiLtJ_G0008677.1 mouse_genomes_project 4 156902150 156902214 + Gm25951 miRNA miRNA MGP_NODShiLtJ_T0014645.1 MGP_NODShiLtJ_G0012753.1 mouse_genomes_project 4 141341657 141342000 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067102.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133237680 133256650 + MGP_NODShiLtJ_P0067102 P3h1 protein_coding protein_coding MGP_NODShiLtJ_T0067103.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133237704 133256653 + MGP_NODShiLtJ_P0067103 P3h1 protein_coding protein_coding MGP_NODShiLtJ_T0067104.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133237711 133256045 + P3h1 protein_coding processed_transcript MGP_NODShiLtJ_T0067105.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133237711 133256650 + MGP_NODShiLtJ_P0067105 P3h1 protein_coding protein_coding MGP_NODShiLtJ_T0067106.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133237719 133256047 + MGP_NODShiLtJ_P0067106 P3h1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067107.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133237755 133256663 + MGP_NODShiLtJ_P0067107 P3h1 protein_coding protein_coding MGP_NODShiLtJ_T0067108.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133238565 133243413 + P3h1 protein_coding processed_transcript MGP_NODShiLtJ_T0067109.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133240109 133249164 + P3h1 protein_coding processed_transcript MGP_NODShiLtJ_T0067110.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133244422 133251818 + P3h1 protein_coding processed_transcript MGP_NODShiLtJ_T0067111.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133252700 133255811 + P3h1 protein_coding processed_transcript MGP_NODShiLtJ_T0067112.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133254316 133256050 + P3h1 protein_coding processed_transcript MGP_NODShiLtJ_T0067113.1 MGP_NODShiLtJ_G0028499.1 mouse_genomes_project 4 133254539 133255732 + P3h1 protein_coding retained_intron MGP_NODShiLtJ_T0069340.1 MGP_NODShiLtJ_G0029007.1 mouse_genomes_project 4 172757418 172758867 + MGP_NODShiLtJ_P0069340 Hes5 protein_coding protein_coding MGP_NODShiLtJ_T0069341.1 MGP_NODShiLtJ_G0029007.1 mouse_genomes_project 4 172757466 172757902 + Hes5 protein_coding processed_transcript MGP_NODShiLtJ_T0014346.1 MGP_NODShiLtJ_G0012454.1 mouse_genomes_project 4 29326173 29327196 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067885.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147470379 147490069 - MGP_NODShiLtJ_P0067885 Trnau1ap protein_coding protein_coding MGP_NODShiLtJ_T0067886.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147470379 147490118 - MGP_NODShiLtJ_P0067886 Trnau1ap protein_coding protein_coding MGP_NODShiLtJ_T0067887.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147470381 147490096 - Trnau1ap protein_coding retained_intron MGP_NODShiLtJ_T0067888.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147470465 147490074 - Trnau1ap protein_coding processed_transcript MGP_NODShiLtJ_T0067889.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147470481 147489969 - MGP_NODShiLtJ_P0067889 Trnau1ap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067890.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147472823 147489994 - MGP_NODShiLtJ_P0067890 Trnau1ap protein_coding protein_coding MGP_NODShiLtJ_T0067891.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147472929 147490084 - MGP_NODShiLtJ_P0067891 Trnau1ap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067892.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147472966 147490062 - Trnau1ap protein_coding processed_transcript MGP_NODShiLtJ_T0067893.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147472969 147490118 - MGP_NODShiLtJ_P0067893 Trnau1ap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067894.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147480941 147485856 - Trnau1ap protein_coding retained_intron MGP_NODShiLtJ_T0067895.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147481419 147490118 - MGP_NODShiLtJ_P0067895 Trnau1ap protein_coding protein_coding MGP_NODShiLtJ_T0067896.1 MGP_NODShiLtJ_G0028672.1 mouse_genomes_project 4 147488688 147490095 - Trnau1ap protein_coding retained_intron MGP_NODShiLtJ_T0066870.1 MGP_NODShiLtJ_G0028443.1 mouse_genomes_project 4 130602793 130604597 - MGP_NODShiLtJ_P0066870 Hpdl protein_coding protein_coding MGP_NODShiLtJ_T0100594.1 MGP_NODShiLtJ_G0038988.1 mouse_genomes_project 4 149641058 149641146 - Gm27619 snoRNA snoRNA MGP_NODShiLtJ_T0066257.1 MGP_NODShiLtJ_G0028320.1 mouse_genomes_project 4 118185311 118294793 + MGP_NODShiLtJ_P0066257 1700024P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0066258.1 MGP_NODShiLtJ_G0028320.1 mouse_genomes_project 4 118185379 118294793 + MGP_NODShiLtJ_P0066258 1700024P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0101903.1 MGP_NODShiLtJ_G0040071.1 mouse_genomes_project 4 48045943 48046246 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0066917.1 MGP_NODShiLtJ_G0028453.1 mouse_genomes_project 4 130985290 131015869 - MGP_NODShiLtJ_P0066917 Kif2c protein_coding protein_coding MGP_NODShiLtJ_T0066918.1 MGP_NODShiLtJ_G0028453.1 mouse_genomes_project 4 130985794 131006422 - MGP_NODShiLtJ_P0066918 Kif2c protein_coding protein_coding MGP_NODShiLtJ_T0066919.1 MGP_NODShiLtJ_G0028453.1 mouse_genomes_project 4 130990329 130991063 - Kif2c protein_coding retained_intron MGP_NODShiLtJ_T0066920.1 MGP_NODShiLtJ_G0028453.1 mouse_genomes_project 4 131001312 131015772 - Kif2c protein_coding retained_intron MGP_NODShiLtJ_T0066921.1 MGP_NODShiLtJ_G0028453.1 mouse_genomes_project 4 131001314 131015836 - Kif2c protein_coding processed_transcript MGP_NODShiLtJ_T0066922.1 MGP_NODShiLtJ_G0028453.1 mouse_genomes_project 4 131002052 131015822 - Kif2c protein_coding retained_intron MGP_NODShiLtJ_T0066923.1 MGP_NODShiLtJ_G0028453.1 mouse_genomes_project 4 131002593 131006404 - Kif2c protein_coding processed_transcript MGP_NODShiLtJ_T0066924.1 MGP_NODShiLtJ_G0028453.1 mouse_genomes_project 4 131002636 131006420 - MGP_NODShiLtJ_P0066924 Kif2c protein_coding protein_coding MGP_NODShiLtJ_T0068017.1 MGP_NODShiLtJ_G0028700.1 mouse_genomes_project 4 148843418 148853213 + MGP_NODShiLtJ_P0068017 Kdf1 protein_coding protein_coding MGP_NODShiLtJ_T0068018.1 MGP_NODShiLtJ_G0028700.1 mouse_genomes_project 4 148843447 148855370 + MGP_NODShiLtJ_P0068018 Kdf1 protein_coding protein_coding MGP_NODShiLtJ_T0068019.1 MGP_NODShiLtJ_G0028700.1 mouse_genomes_project 4 148843478 148852936 + MGP_NODShiLtJ_P0068019 Kdf1 protein_coding protein_coding MGP_NODShiLtJ_T0068020.1 MGP_NODShiLtJ_G0028700.1 mouse_genomes_project 4 148843510 148855365 + MGP_NODShiLtJ_P0068020 Kdf1 protein_coding protein_coding MGP_NODShiLtJ_T0068021.1 MGP_NODShiLtJ_G0028700.1 mouse_genomes_project 4 148843538 148855367 + MGP_NODShiLtJ_P0068021 Kdf1 protein_coding protein_coding MGP_NODShiLtJ_T0065056.1 MGP_NODShiLtJ_G0028023.1 mouse_genomes_project 4 47925563 47927785 - Hint2 protein_coding processed_transcript MGP_NODShiLtJ_T0065057.1 MGP_NODShiLtJ_G0028023.1 mouse_genomes_project 4 47925563 47927780 - Hint2 protein_coding processed_transcript MGP_NODShiLtJ_T0065058.1 MGP_NODShiLtJ_G0028023.1 mouse_genomes_project 4 47925564 47926293 - Hint2 protein_coding processed_transcript MGP_NODShiLtJ_T0065059.1 MGP_NODShiLtJ_G0028023.1 mouse_genomes_project 4 47925565 47926064 - Hint2 protein_coding processed_transcript MGP_NODShiLtJ_T0065060.1 MGP_NODShiLtJ_G0028023.1 mouse_genomes_project 4 47925565 47927803 - MGP_NODShiLtJ_P0065060 Hint2 protein_coding protein_coding MGP_NODShiLtJ_T0065061.1 MGP_NODShiLtJ_G0028023.1 mouse_genomes_project 4 47925566 47927785 - Hint2 protein_coding processed_transcript MGP_NODShiLtJ_T0065062.1 MGP_NODShiLtJ_G0028023.1 mouse_genomes_project 4 47926010 47927080 - Hint2 protein_coding processed_transcript MGP_NODShiLtJ_T0065946.1 MGP_NODShiLtJ_G0028253.1 mouse_genomes_project 4 101524896 101532918 + MGP_NODShiLtJ_P0065946 Zfp352 protein_coding protein_coding MGP_NODShiLtJ_T0065947.1 MGP_NODShiLtJ_G0028253.1 mouse_genomes_project 4 101530829 101532485 + MGP_NODShiLtJ_P0065947 Zfp352 protein_coding protein_coding MGP_NODShiLtJ_T0068265.1 MGP_NODShiLtJ_G0028756.1 mouse_genomes_project 4 151509015 151538680 + MGP_NODShiLtJ_P0068265 Cnr2 protein_coding protein_coding MGP_NODShiLtJ_T0068266.1 MGP_NODShiLtJ_G0028756.1 mouse_genomes_project 4 151526157 151538680 + MGP_NODShiLtJ_P0068266 Cnr2 protein_coding protein_coding MGP_NODShiLtJ_T0065593.1 MGP_NODShiLtJ_G0028163.1 mouse_genomes_project 4 68924261 68927530 - MGP_NODShiLtJ_P0065593 Hdhd3 protein_coding protein_coding MGP_NODShiLtJ_T0065594.1 MGP_NODShiLtJ_G0028163.1 mouse_genomes_project 4 68925196 68928721 - Hdhd3 protein_coding processed_transcript MGP_NODShiLtJ_T0014380.1 MGP_NODShiLtJ_G0012488.1 mouse_genomes_project 4 41395332 41396779 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066157.1 MGP_NODShiLtJ_G0028301.1 mouse_genomes_project 4 114519079 114632571 + MGP_NODShiLtJ_P0066157 Dnajc6 protein_coding protein_coding MGP_NODShiLtJ_T0066158.1 MGP_NODShiLtJ_G0028301.1 mouse_genomes_project 4 114530283 114669622 + MGP_NODShiLtJ_P0066158 Dnajc6 protein_coding protein_coding MGP_NODShiLtJ_T0066159.1 MGP_NODShiLtJ_G0028301.1 mouse_genomes_project 4 114530388 114637324 + MGP_NODShiLtJ_P0066159 Dnajc6 protein_coding protein_coding MGP_NODShiLtJ_T0066160.1 MGP_NODShiLtJ_G0028301.1 mouse_genomes_project 4 114530442 114625072 + Dnajc6 protein_coding processed_transcript MGP_NODShiLtJ_T0066161.1 MGP_NODShiLtJ_G0028301.1 mouse_genomes_project 4 114577103 114668104 + MGP_NODShiLtJ_P0066161 Dnajc6 protein_coding protein_coding MGP_NODShiLtJ_T0064853.1 MGP_NODShiLtJ_G0027993.1 mouse_genomes_project 4 46791327 46792427 + MGP_NODShiLtJ_P0064853 protein_coding protein_coding MGP_NODShiLtJ_T0099241.1 MGP_NODShiLtJ_G0037635.1 mouse_genomes_project 4 6444309 6444415 + Gm23423 snRNA snRNA MGP_NODShiLtJ_T0099279.1 MGP_NODShiLtJ_G0037673.1 mouse_genomes_project 4 109562670 109562733 + Gm27579 snRNA snRNA MGP_NODShiLtJ_T0064495.1 MGP_NODShiLtJ_G0027905.1 mouse_genomes_project 4 21332701 21341509 - MGP_NODShiLtJ_P0064495 Tstd3 protein_coding protein_coding MGP_NODShiLtJ_T0014717.1 MGP_NODShiLtJ_G0012825.1 mouse_genomes_project 4 169709146 169709630 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064834.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45902048 45905529 + MGP_NODShiLtJ_P0064834 Galt protein_coding protein_coding MGP_NODShiLtJ_T0064835.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45902048 45905529 + MGP_NODShiLtJ_P0064835 Galt protein_coding protein_coding MGP_NODShiLtJ_T0064836.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45902073 45904384 + Galt protein_coding processed_transcript MGP_NODShiLtJ_T0064837.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45902073 45903275 + Galt protein_coding processed_transcript MGP_NODShiLtJ_T0064838.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45902582 45904315 + Galt protein_coding processed_transcript MGP_NODShiLtJ_T0064839.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45902664 45904107 + Galt protein_coding processed_transcript MGP_NODShiLtJ_T0064840.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45902785 45904315 + Galt protein_coding processed_transcript MGP_NODShiLtJ_T0064841.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45903034 45905529 + Galt protein_coding processed_transcript MGP_NODShiLtJ_T0064842.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45903078 45905072 + Galt protein_coding processed_transcript MGP_NODShiLtJ_T0064843.1 MGP_NODShiLtJ_G0027986.1 mouse_genomes_project 4 45903086 45904613 + Galt protein_coding processed_transcript MGP_NODShiLtJ_T0066055.1 MGP_NODShiLtJ_G0028279.1 mouse_genomes_project 4 111151558 111172541 - MGP_NODShiLtJ_P0066055 Tm2d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066056.1 MGP_NODShiLtJ_G0028279.1 mouse_genomes_project 4 111151558 111180499 - MGP_NODShiLtJ_P0066056 Tm2d1 protein_coding protein_coding MGP_NODShiLtJ_T0066057.1 MGP_NODShiLtJ_G0028279.1 mouse_genomes_project 4 111151558 111180685 - MGP_NODShiLtJ_P0066057 Tm2d1 protein_coding protein_coding MGP_NODShiLtJ_T0066058.1 MGP_NODShiLtJ_G0028279.1 mouse_genomes_project 4 111151558 111180745 - MGP_NODShiLtJ_P0066058 Tm2d1 protein_coding protein_coding MGP_NODShiLtJ_T0066059.1 MGP_NODShiLtJ_G0028279.1 mouse_genomes_project 4 111151793 111180671 - MGP_NODShiLtJ_P0066059 Tm2d1 protein_coding protein_coding MGP_NODShiLtJ_T0014314.1 MGP_NODShiLtJ_G0012422.1 mouse_genomes_project 4 17359352 17359798 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014634.1 MGP_NODShiLtJ_G0012742.1 mouse_genomes_project 4 137746619 137747192 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068200.1 MGP_NODShiLtJ_G0028742.1 mouse_genomes_project 4 150477654 150484323 + MGP_NODShiLtJ_P0068200 Syf2 protein_coding protein_coding MGP_NODShiLtJ_T0068201.1 MGP_NODShiLtJ_G0028742.1 mouse_genomes_project 4 150477658 150481806 + Syf2 protein_coding retained_intron MGP_NODShiLtJ_T0068202.1 MGP_NODShiLtJ_G0028742.1 mouse_genomes_project 4 150477766 150482835 + Syf2 protein_coding retained_intron MGP_NODShiLtJ_T0014387.1 MGP_NODShiLtJ_G0012495.1 mouse_genomes_project 4 43819246 43819934 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010469.1 MGP_NODShiLtJ_G0008602.1 mouse_genomes_project 4 8249525 8249656 - Mir3471-1 miRNA miRNA MGP_NODShiLtJ_T0014278.1 MGP_NODShiLtJ_G0012386.1 mouse_genomes_project 4 7241368 7242031 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064462.1 MGP_NODShiLtJ_G0027892.1 mouse_genomes_project 4 17892853 18218118 - MGP_NODShiLtJ_P0064462 Cnbd1 protein_coding protein_coding MGP_NODShiLtJ_T0067929.1 MGP_NODShiLtJ_G0028679.1 mouse_genomes_project 4 147764203 147788849 + MGP_NODShiLtJ_P0067929 Ptafr protein_coding protein_coding MGP_NODShiLtJ_T0069479.1 MGP_NODShiLtJ_G0029031.1 mouse_genomes_project 4 173658814 173661548 + MGP_NODShiLtJ_P0069479 Ankrd65 protein_coding protein_coding MGP_NODShiLtJ_T0069480.1 MGP_NODShiLtJ_G0029031.1 mouse_genomes_project 4 173659547 173668977 + MGP_NODShiLtJ_P0069480 Ankrd65 protein_coding protein_coding MGP_NODShiLtJ_T0099280.1 MGP_NODShiLtJ_G0037674.1 mouse_genomes_project 4 109562745 109562809 + Gm27521 snRNA snRNA MGP_NODShiLtJ_T0068786.1 MGP_NODShiLtJ_G0028898.1 mouse_genomes_project 4 161154315 161164440 - MGP_NODShiLtJ_P0068786 Aadacl3 protein_coding protein_coding MGP_NODShiLtJ_T0010488.1 MGP_NODShiLtJ_G0008621.1 mouse_genomes_project 4 49243971 49244096 + Gm22639 miRNA miRNA MGP_NODShiLtJ_T0099242.1 MGP_NODShiLtJ_G0037636.1 mouse_genomes_project 4 6957400 6957563 - Gm24152 snRNA snRNA MGP_NODShiLtJ_T0065300.1 MGP_NODShiLtJ_G0028077.1 mouse_genomes_project 4 52693143 52740755 + MGP_NODShiLtJ_P0065300 Nr4a3 protein_coding protein_coding MGP_NODShiLtJ_T0065301.1 MGP_NODShiLtJ_G0028077.1 mouse_genomes_project 4 52693221 52698156 + Nr4a3 protein_coding processed_transcript MGP_NODShiLtJ_T0065302.1 MGP_NODShiLtJ_G0028077.1 mouse_genomes_project 4 52697104 52740757 + MGP_NODShiLtJ_P0065302 Nr4a3 protein_coding protein_coding MGP_NODShiLtJ_T0065303.1 MGP_NODShiLtJ_G0028077.1 mouse_genomes_project 4 52699238 52704730 + Nr4a3 protein_coding processed_transcript MGP_NODShiLtJ_T0007909.1 MGP_NODShiLtJ_G0006453.1 mouse_genomes_project 4 146061872 146066993 - A930031H19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007910.1 MGP_NODShiLtJ_G0006453.1 mouse_genomes_project 4 146061872 146075973 - A930031H19Rik lincRNA lincRNA MGP_NODShiLtJ_T0066871.1 MGP_NODShiLtJ_G0028444.1 mouse_genomes_project 4 130664711 130784570 + MGP_NODShiLtJ_P0066871 Zswim5 protein_coding protein_coding MGP_NODShiLtJ_T0065365.1 MGP_NODShiLtJ_G0028096.1 mouse_genomes_project 4 56468669 56487563 + MGP_NODShiLtJ_P0065365 protein_coding protein_coding MGP_NODShiLtJ_T0065366.1 MGP_NODShiLtJ_G0028096.1 mouse_genomes_project 4 56468669 56487219 + MGP_NODShiLtJ_P0065366 protein_coding protein_coding MGP_NODShiLtJ_T0014508.1 MGP_NODShiLtJ_G0012616.1 mouse_genomes_project 4 94235376 94235839 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066673.1 MGP_NODShiLtJ_G0028400.1 mouse_genomes_project 4 128563801 128579122 + MGP_NODShiLtJ_P0066673 Tal1 protein_coding protein_coding MGP_NODShiLtJ_T0066674.1 MGP_NODShiLtJ_G0028400.1 mouse_genomes_project 4 128564813 128570957 + MGP_NODShiLtJ_P0066674 Tal1 protein_coding protein_coding MGP_NODShiLtJ_T0066675.1 MGP_NODShiLtJ_G0028400.1 mouse_genomes_project 4 128565186 128578594 + MGP_NODShiLtJ_P0066675 Tal1 protein_coding protein_coding MGP_NODShiLtJ_T0066676.1 MGP_NODShiLtJ_G0028400.1 mouse_genomes_project 4 128566884 128577831 + MGP_NODShiLtJ_P0066676 Tal1 protein_coding protein_coding MGP_NODShiLtJ_T0066032.1 MGP_NODShiLtJ_G0028272.1 mouse_genomes_project 4 109113894 109153702 - MGP_NODShiLtJ_P0066032 Cyp2j6 protein_coding protein_coding MGP_NODShiLtJ_T0065381.1 MGP_NODShiLtJ_G0028103.1 mouse_genomes_project 4 58569652 58582996 + MGP_NODShiLtJ_P0065381 Nipsnap3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065382.1 MGP_NODShiLtJ_G0028103.1 mouse_genomes_project 4 58569664 58583003 + MGP_NODShiLtJ_P0065382 Nipsnap3a protein_coding protein_coding MGP_NODShiLtJ_T0065383.1 MGP_NODShiLtJ_G0028103.1 mouse_genomes_project 4 58569798 58586731 + MGP_NODShiLtJ_P0065383 Nipsnap3a protein_coding protein_coding MGP_NODShiLtJ_T0065384.1 MGP_NODShiLtJ_G0028103.1 mouse_genomes_project 4 58582412 58582995 + Nipsnap3a protein_coding retained_intron MGP_NODShiLtJ_T0100531.1 MGP_NODShiLtJ_G0038925.1 mouse_genomes_project 4 47369369 47369499 - Gm23709 snoRNA snoRNA MGP_NODShiLtJ_T0067260.1 MGP_NODShiLtJ_G0028538.1 mouse_genomes_project 4 137560876 137591482 + MGP_NODShiLtJ_P0067260 Bmp8b protein_coding protein_coding MGP_NODShiLtJ_T0067261.1 MGP_NODShiLtJ_G0028538.1 mouse_genomes_project 4 137584273 137598561 + Bmp8b protein_coding processed_transcript MGP_NODShiLtJ_T0067772.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145295125 145306732 - MGP_NODShiLtJ_P0067772 Tinagl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067773.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145296273 145306732 - MGP_NODShiLtJ_P0067773 Tinagl1 protein_coding protein_coding MGP_NODShiLtJ_T0067774.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145296275 145297283 - Tinagl1 protein_coding retained_intron MGP_NODShiLtJ_T0067775.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145296275 145306722 - MGP_NODShiLtJ_P0067775 Tinagl1 protein_coding protein_coding MGP_NODShiLtJ_T0067776.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145296390 145307052 - MGP_NODShiLtJ_P0067776 Tinagl1 protein_coding protein_coding MGP_NODShiLtJ_T0067777.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145297648 145300155 - Tinagl1 protein_coding retained_intron MGP_NODShiLtJ_T0067778.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145299783 145306621 - MGP_NODShiLtJ_P0067778 Tinagl1 protein_coding protein_coding MGP_NODShiLtJ_T0067779.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145303336 145306722 - Tinagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0067780.1 MGP_NODShiLtJ_G0028649.1 mouse_genomes_project 4 145305639 145306750 - Tinagl1 protein_coding retained_intron MGP_NODShiLtJ_T0014505.1 MGP_NODShiLtJ_G0012613.1 mouse_genomes_project 4 93730695 93730896 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014483.1 MGP_NODShiLtJ_G0012591.1 mouse_genomes_project 4 83802067 83802382 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017946.1 MGP_NODShiLtJ_G0015443.1 mouse_genomes_project 4 141902939 141906181 + Gm12940 processed_transcript processed_transcript MGP_NODShiLtJ_T0017947.1 MGP_NODShiLtJ_G0015443.1 mouse_genomes_project 4 141904653 141906181 + Gm12940 processed_transcript processed_transcript MGP_NODShiLtJ_T0017948.1 MGP_NODShiLtJ_G0015443.1 mouse_genomes_project 4 141904880 141919304 + Gm12940 processed_transcript processed_transcript MGP_NODShiLtJ_T0017949.1 MGP_NODShiLtJ_G0015443.1 mouse_genomes_project 4 141904981 141906119 + Gm12940 processed_transcript processed_transcript MGP_NODShiLtJ_T0004545.1 MGP_NODShiLtJ_G0003940.1 mouse_genomes_project 4 168277701 168312295 - 1700045H11Rik antisense antisense MGP_NODShiLtJ_T0065178.1 MGP_NODShiLtJ_G0028048.1 mouse_genomes_project 4 49712109 49734071 + MGP_NODShiLtJ_P0065178 Trmt10b protein_coding protein_coding MGP_NODShiLtJ_T0065179.1 MGP_NODShiLtJ_G0028048.1 mouse_genomes_project 4 49712137 49719371 + MGP_NODShiLtJ_P0065179 Trmt10b protein_coding protein_coding MGP_NODShiLtJ_T0065180.1 MGP_NODShiLtJ_G0028048.1 mouse_genomes_project 4 49715396 49725180 + Trmt10b protein_coding processed_transcript MGP_NODShiLtJ_T0065181.1 MGP_NODShiLtJ_G0028048.1 mouse_genomes_project 4 49715416 49733082 + Trmt10b protein_coding processed_transcript MGP_NODShiLtJ_T0065182.1 MGP_NODShiLtJ_G0028048.1 mouse_genomes_project 4 49715416 49719368 + Trmt10b protein_coding processed_transcript MGP_NODShiLtJ_T0065183.1 MGP_NODShiLtJ_G0028048.1 mouse_genomes_project 4 49715416 49733082 + MGP_NODShiLtJ_P0065183 Trmt10b protein_coding protein_coding MGP_NODShiLtJ_T0065184.1 MGP_NODShiLtJ_G0028048.1 mouse_genomes_project 4 49732037 49732988 + Trmt10b protein_coding processed_transcript MGP_NODShiLtJ_T0065269.1 MGP_NODShiLtJ_G0028069.1 mouse_genomes_project 4 51138895 51188256 - MGP_NODShiLtJ_P0065269 Tbc1d2 protein_coding protein_coding MGP_NODShiLtJ_T0065270.1 MGP_NODShiLtJ_G0028069.1 mouse_genomes_project 4 51169523 51188256 - MGP_NODShiLtJ_P0065270 Tbc1d2 protein_coding protein_coding MGP_NODShiLtJ_T0007899.1 MGP_NODShiLtJ_G0006447.1 mouse_genomes_project 4 144369133 144379501 + Gm26722 lincRNA lincRNA MGP_NODShiLtJ_T0011453.1 MGP_NODShiLtJ_G0009586.1 mouse_genomes_project 4 50603332 50603599 + Gm23250 misc_RNA misc_RNA MGP_NODShiLtJ_T0067213.1 MGP_NODShiLtJ_G0028522.1 mouse_genomes_project 4 135077500 135078329 - MGP_NODShiLtJ_P0067213 Exo5 protein_coding protein_coding MGP_NODShiLtJ_T0067214.1 MGP_NODShiLtJ_G0028522.1 mouse_genomes_project 4 135077500 135081034 - MGP_NODShiLtJ_P0067214 Exo5 protein_coding protein_coding MGP_NODShiLtJ_T0067215.1 MGP_NODShiLtJ_G0028522.1 mouse_genomes_project 4 135077506 135081034 - MGP_NODShiLtJ_P0067215 Exo5 protein_coding protein_coding MGP_NODShiLtJ_T0067216.1 MGP_NODShiLtJ_G0028522.1 mouse_genomes_project 4 135078573 135081046 - MGP_NODShiLtJ_P0067216 Exo5 protein_coding protein_coding MGP_NODShiLtJ_T0064517.1 MGP_NODShiLtJ_G0027908.1 mouse_genomes_project 4 21461199 21501417 + MGP_NODShiLtJ_P0064517 Coq3 protein_coding protein_coding MGP_NODShiLtJ_T0064518.1 MGP_NODShiLtJ_G0027908.1 mouse_genomes_project 4 21485432 21487166 + Coq3 protein_coding processed_transcript MGP_NODShiLtJ_T0067381.1 MGP_NODShiLtJ_G0028569.1 mouse_genomes_project 4 139824610 139834027 - MGP_NODShiLtJ_P0067381 Zc3h12a protein_coding protein_coding MGP_NODShiLtJ_T0067382.1 MGP_NODShiLtJ_G0028569.1 mouse_genomes_project 4 139826280 139828707 - Zc3h12a protein_coding retained_intron MGP_NODShiLtJ_T0068657.1 MGP_NODShiLtJ_G0028852.1 mouse_genomes_project 4 157692659 157696056 - MGP_NODShiLtJ_P0068657 Gm694 protein_coding protein_coding MGP_NODShiLtJ_T0010513.1 MGP_NODShiLtJ_G0008646.1 mouse_genomes_project 4 134916107 134916199 - Mir30e miRNA miRNA MGP_NODShiLtJ_T0007904.1 MGP_NODShiLtJ_G0006449.1 mouse_genomes_project 4 145076347 145079488 + 1700003M07Rik lincRNA lincRNA MGP_NODShiLtJ_T0007905.1 MGP_NODShiLtJ_G0006449.1 mouse_genomes_project 4 145076781 145079625 + 1700003M07Rik lincRNA lincRNA MGP_NODShiLtJ_T0010543.1 MGP_NODShiLtJ_G0008676.1 mouse_genomes_project 4 156871676 156871772 + Gm23045 miRNA miRNA MGP_NODShiLtJ_T0007829.1 MGP_NODShiLtJ_G0006396.1 mouse_genomes_project 4 106475521 106832152 - lincRNA lincRNA MGP_NODShiLtJ_T0004371.1 MGP_NODShiLtJ_G0003807.1 mouse_genomes_project 4 19252670 19259161 - 4930480G23Rik antisense antisense MGP_NODShiLtJ_T0064217.1 MGP_NODShiLtJ_G0027836.1 mouse_genomes_project 4 155051 190142 - MGP_NODShiLtJ_P0064217 Tmem68 protein_coding protein_coding MGP_NODShiLtJ_T0064218.1 MGP_NODShiLtJ_G0027836.1 mouse_genomes_project 4 155051 190098 - MGP_NODShiLtJ_P0064218 Tmem68 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064219.1 MGP_NODShiLtJ_G0027836.1 mouse_genomes_project 4 156338 158184 - Tmem68 protein_coding retained_intron MGP_NODShiLtJ_T0064220.1 MGP_NODShiLtJ_G0027836.1 mouse_genomes_project 4 184631 190093 - Tmem68 protein_coding retained_intron MGP_NODShiLtJ_T0064221.1 MGP_NODShiLtJ_G0027836.1 mouse_genomes_project 4 184650 190093 - Tmem68 protein_coding processed_transcript MGP_NODShiLtJ_T0064222.1 MGP_NODShiLtJ_G0027836.1 mouse_genomes_project 4 184825 189816 - MGP_NODShiLtJ_P0064222 Tmem68 protein_coding protein_coding MGP_NODShiLtJ_T0065205.1 MGP_NODShiLtJ_G0028053.1 mouse_genomes_project 4 50259082 50264643 + MGP_NODShiLtJ_P0065205 Aldh1b1 protein_coding protein_coding MGP_NODShiLtJ_T0065206.1 MGP_NODShiLtJ_G0028053.1 mouse_genomes_project 4 50259181 50262897 + MGP_NODShiLtJ_P0065206 Aldh1b1 protein_coding protein_coding MGP_NODShiLtJ_T0068161.1 MGP_NODShiLtJ_G0028732.1 mouse_genomes_project 4 150002047 150019701 + MGP_NODShiLtJ_P0068161 Paqr7 protein_coding protein_coding MGP_NODShiLtJ_T0068162.1 MGP_NODShiLtJ_G0028732.1 mouse_genomes_project 4 150002325 150018094 + MGP_NODShiLtJ_P0068162 Paqr7 protein_coding protein_coding MGP_NODShiLtJ_T0068163.1 MGP_NODShiLtJ_G0028732.1 mouse_genomes_project 4 150002325 150018425 + MGP_NODShiLtJ_P0068163 Paqr7 protein_coding protein_coding MGP_NODShiLtJ_T0068164.1 MGP_NODShiLtJ_G0028732.1 mouse_genomes_project 4 150002331 150018154 + MGP_NODShiLtJ_P0068164 Paqr7 protein_coding protein_coding MGP_NODShiLtJ_T0068165.1 MGP_NODShiLtJ_G0028732.1 mouse_genomes_project 4 150002354 150021085 + MGP_NODShiLtJ_P0068165 Paqr7 protein_coding protein_coding MGP_NODShiLtJ_T0068166.1 MGP_NODShiLtJ_G0028732.1 mouse_genomes_project 4 150002391 150017874 + Paqr7 protein_coding processed_transcript MGP_NODShiLtJ_T0017920.1 MGP_NODShiLtJ_G0015427.1 mouse_genomes_project 4 108479135 108488256 - 9530080O11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017921.1 MGP_NODShiLtJ_G0015427.1 mouse_genomes_project 4 108479663 108487636 - 9530080O11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099255.1 MGP_NODShiLtJ_G0037649.1 mouse_genomes_project 4 43962346 43962408 - Gm26087 snRNA snRNA MGP_NODShiLtJ_T0068752.1 MGP_NODShiLtJ_G0028877.1 mouse_genomes_project 4 160059321 160065841 + MGP_NODShiLtJ_P0068752 protein_coding protein_coding MGP_NODShiLtJ_T0099328.1 MGP_NODShiLtJ_G0037722.1 mouse_genomes_project 4 173574883 173574985 - Gm22573 snRNA snRNA MGP_NODShiLtJ_T0007927.1 MGP_NODShiLtJ_G0006463.1 mouse_genomes_project 4 149184042 149185238 + Gm12974 lincRNA lincRNA MGP_NODShiLtJ_T0100510.1 MGP_NODShiLtJ_G0038904.1 mouse_genomes_project 4 477178 477315 - Gm22781 snoRNA snoRNA MGP_NODShiLtJ_T0065074.1 MGP_NODShiLtJ_G0028028.1 mouse_genomes_project 4 48003277 48004729 + MGP_NODShiLtJ_P0065074 Hrct1 protein_coding protein_coding MGP_NODShiLtJ_T0017885.1 MGP_NODShiLtJ_G0015403.1 mouse_genomes_project 4 17290334 17924423 + processed_transcript processed_transcript MGP_NODShiLtJ_T0068754.1 MGP_NODShiLtJ_G0028879.1 mouse_genomes_project 4 160211226 160217476 - MGP_NODShiLtJ_P0068754 Gm13089 protein_coding protein_coding MGP_NODShiLtJ_T0007870.1 MGP_NODShiLtJ_G0006428.1 mouse_genomes_project 4 133043508 133061157 - Gm12866 lincRNA lincRNA MGP_NODShiLtJ_T0066586.1 MGP_NODShiLtJ_G0028381.1 mouse_genomes_project 4 123363499 123369896 + Faf1 protein_coding processed_transcript MGP_NODShiLtJ_T0066587.1 MGP_NODShiLtJ_G0028381.1 mouse_genomes_project 4 123363530 123734531 + MGP_NODShiLtJ_P0066587 Faf1 protein_coding protein_coding MGP_NODShiLtJ_T0097812.1 MGP_NODShiLtJ_G0036224.1 mouse_genomes_project 4 173544539 173546679 + pseudogene pseudogene MGP_NODShiLtJ_T0064412.1 MGP_NODShiLtJ_G0027876.1 mouse_genomes_project 4 9644119 9664007 + MGP_NODShiLtJ_P0064412 protein_coding protein_coding MGP_NODShiLtJ_T0064413.1 MGP_NODShiLtJ_G0027876.1 mouse_genomes_project 4 9644121 9664328 + MGP_NODShiLtJ_P0064413 protein_coding protein_coding MGP_NODShiLtJ_T0007953.1 MGP_NODShiLtJ_G0006485.1 mouse_genomes_project 4 165440598 165450191 + Gm13206 lincRNA lincRNA MGP_NODShiLtJ_T0066037.1 MGP_NODShiLtJ_G0028276.1 mouse_genomes_project 4 109859727 109860054 - MGP_NODShiLtJ_P0066037 Gm10192 protein_coding protein_coding MGP_NODShiLtJ_T0017937.1 MGP_NODShiLtJ_G0015440.1 mouse_genomes_project 4 139404970 139423216 - Gm12915 processed_transcript processed_transcript MGP_NODShiLtJ_T0010540.1 MGP_NODShiLtJ_G0008673.1 mouse_genomes_project 4 154239841 154239951 - Gm27646 miRNA miRNA MGP_NODShiLtJ_T0007730.1 MGP_NODShiLtJ_G0006314.1 mouse_genomes_project 4 2540950 2553252 + 4930423M02Rik lincRNA lincRNA MGP_NODShiLtJ_T0007731.1 MGP_NODShiLtJ_G0006314.1 mouse_genomes_project 4 2540958 2552725 + 4930423M02Rik lincRNA lincRNA MGP_NODShiLtJ_T0067716.1 MGP_NODShiLtJ_G0028640.1 mouse_genomes_project 4 144727344 144759295 - MGP_NODShiLtJ_P0067716 Kpna6 protein_coding protein_coding MGP_NODShiLtJ_T0067717.1 MGP_NODShiLtJ_G0028640.1 mouse_genomes_project 4 144737847 144739128 - Kpna6 protein_coding retained_intron MGP_NODShiLtJ_T0067718.1 MGP_NODShiLtJ_G0028640.1 mouse_genomes_project 4 144738495 144740931 - Kpna6 protein_coding retained_intron MGP_NODShiLtJ_T0067719.1 MGP_NODShiLtJ_G0028640.1 mouse_genomes_project 4 144741651 144759054 - MGP_NODShiLtJ_P0067719 Kpna6 protein_coding protein_coding MGP_NODShiLtJ_T0067720.1 MGP_NODShiLtJ_G0028640.1 mouse_genomes_project 4 144745194 144759293 - Kpna6 protein_coding retained_intron MGP_NODShiLtJ_T0065640.1 MGP_NODShiLtJ_G0028174.1 mouse_genomes_project 4 69847120 69850399 + MGP_NODShiLtJ_P0065640 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0017898.1 MGP_NODShiLtJ_G0015411.1 mouse_genomes_project 4 48403460 48421077 + Gm12503 processed_transcript processed_transcript MGP_NODShiLtJ_T0068378.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153369379 153381521 + MGP_NODShiLtJ_P0068378 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068379.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153369764 153437722 + MGP_NODShiLtJ_P0068379 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068380.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153369831 153403095 + MGP_NODShiLtJ_P0068380 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068381.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153369831 153437722 + MGP_NODShiLtJ_P0068381 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068382.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153369852 153403095 + MGP_NODShiLtJ_P0068382 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068383.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153396274 153403095 + MGP_NODShiLtJ_P0068383 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068384.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153397531 153401174 + Usp48 protein_coding processed_transcript MGP_NODShiLtJ_T0068385.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153398962 153412337 + Usp48 protein_coding processed_transcript MGP_NODShiLtJ_T0068386.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153401174 153412771 + MGP_NODShiLtJ_P0068386 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068387.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153402966 153437728 + Usp48 protein_coding processed_transcript MGP_NODShiLtJ_T0068388.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153412510 153434446 + MGP_NODShiLtJ_P0068388 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068389.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153412581 153416603 + MGP_NODShiLtJ_P0068389 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068390.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153412985 153432197 + MGP_NODShiLtJ_P0068390 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068391.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153423520 153434439 + MGP_NODShiLtJ_P0068391 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068392.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153423605 153432031 + MGP_NODShiLtJ_P0068392 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068393.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153429491 153435522 + MGP_NODShiLtJ_P0068393 Usp48 protein_coding protein_coding MGP_NODShiLtJ_T0068394.1 MGP_NODShiLtJ_G0028789.1 mouse_genomes_project 4 153436585 153437721 + Usp48 protein_coding processed_transcript MGP_NODShiLtJ_T0064384.1 MGP_NODShiLtJ_G0027868.1 mouse_genomes_project 4 9059473 9107443 + Rad54b protein_coding processed_transcript MGP_NODShiLtJ_T0064385.1 MGP_NODShiLtJ_G0027868.1 mouse_genomes_project 4 9059493 9097334 + MGP_NODShiLtJ_P0064385 Rad54b protein_coding protein_coding MGP_NODShiLtJ_T0064386.1 MGP_NODShiLtJ_G0027868.1 mouse_genomes_project 4 9059500 9082653 + MGP_NODShiLtJ_P0064386 Rad54b protein_coding protein_coding MGP_NODShiLtJ_T0064387.1 MGP_NODShiLtJ_G0027868.1 mouse_genomes_project 4 9059523 9129247 + MGP_NODShiLtJ_P0064387 Rad54b protein_coding protein_coding MGP_NODShiLtJ_T0064388.1 MGP_NODShiLtJ_G0027868.1 mouse_genomes_project 4 9080338 9109574 + Rad54b protein_coding processed_transcript MGP_NODShiLtJ_T0064390.1 MGP_NODShiLtJ_G0027868.1 mouse_genomes_project 4 9109673 9119652 + MGP_NODShiLtJ_P0064390 Rad54b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064391.1 MGP_NODShiLtJ_G0027868.1 mouse_genomes_project 4 9122882 9124285 + Rad54b protein_coding retained_intron MGP_NODShiLtJ_T0065334.1 MGP_NODShiLtJ_G0028086.1 mouse_genomes_project 4 54256295 54267135 - MGP_NODShiLtJ_P0065334 protein_coding protein_coding MGP_NODShiLtJ_T0065336.1 MGP_NODShiLtJ_G0028086.1 mouse_genomes_project 4 54259783 54267135 - protein_coding processed_transcript MGP_NODShiLtJ_T0007740.1 MGP_NODShiLtJ_G0006319.1 mouse_genomes_project 4 8798437 8820307 + Gm26663 lincRNA lincRNA MGP_NODShiLtJ_T0011449.1 MGP_NODShiLtJ_G0009582.1 mouse_genomes_project 4 34755660 34755927 + Gm24371 misc_RNA misc_RNA MGP_NODShiLtJ_T0014337.1 MGP_NODShiLtJ_G0012445.1 mouse_genomes_project 4 25805573 25806064 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067874.1 MGP_NODShiLtJ_G0028669.1 mouse_genomes_project 4 147361215 147399572 - MGP_NODShiLtJ_P0067874 Gmeb1 protein_coding protein_coding MGP_NODShiLtJ_T0067875.1 MGP_NODShiLtJ_G0028669.1 mouse_genomes_project 4 147364025 147409897 - MGP_NODShiLtJ_P0067875 Gmeb1 protein_coding protein_coding MGP_NODShiLtJ_T0067876.1 MGP_NODShiLtJ_G0028669.1 mouse_genomes_project 4 147366098 147398930 - MGP_NODShiLtJ_P0067876 Gmeb1 protein_coding protein_coding MGP_NODShiLtJ_T0067877.1 MGP_NODShiLtJ_G0028669.1 mouse_genomes_project 4 147366750 147409978 - MGP_NODShiLtJ_P0067877 Gmeb1 protein_coding protein_coding MGP_NODShiLtJ_T0067878.1 MGP_NODShiLtJ_G0028669.1 mouse_genomes_project 4 147373946 147377179 - Gmeb1 protein_coding retained_intron MGP_NODShiLtJ_T0067879.1 MGP_NODShiLtJ_G0028669.1 mouse_genomes_project 4 147378965 147391797 - Gmeb1 protein_coding retained_intron MGP_NODShiLtJ_T0067880.1 MGP_NODShiLtJ_G0028669.1 mouse_genomes_project 4 147398841 147401330 - Gmeb1 protein_coding processed_transcript MGP_NODShiLtJ_T0014426.1 MGP_NODShiLtJ_G0012534.1 mouse_genomes_project 4 58382326 58382956 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010470.1 MGP_NODShiLtJ_G0008603.1 mouse_genomes_project 4 8274927 8275034 + n-TSaga9 miRNA miRNA MGP_NODShiLtJ_T0064606.1 MGP_NODShiLtJ_G0027927.1 mouse_genomes_project 4 35060382 35227044 - MGP_NODShiLtJ_P0064606 Ankrd6 protein_coding protein_coding MGP_NODShiLtJ_T0064607.1 MGP_NODShiLtJ_G0027927.1 mouse_genomes_project 4 35062087 35120037 - MGP_NODShiLtJ_P0064607 Ankrd6 protein_coding protein_coding MGP_NODShiLtJ_T0064608.1 MGP_NODShiLtJ_G0027927.1 mouse_genomes_project 4 35062460 35124102 - MGP_NODShiLtJ_P0064608 Ankrd6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064609.1 MGP_NODShiLtJ_G0027927.1 mouse_genomes_project 4 35077568 35079099 - Ankrd6 protein_coding processed_transcript MGP_NODShiLtJ_T0064610.1 MGP_NODShiLtJ_G0027927.1 mouse_genomes_project 4 35080761 35185938 - Ankrd6 protein_coding processed_transcript MGP_NODShiLtJ_T0064611.1 MGP_NODShiLtJ_G0027927.1 mouse_genomes_project 4 35083392 35120278 - Ankrd6 protein_coding processed_transcript MGP_NODShiLtJ_T0014692.1 MGP_NODShiLtJ_G0012800.1 mouse_genomes_project 4 159856822 159857581 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067047.1 MGP_NODShiLtJ_G0028476.1 mouse_genomes_project 4 132386773 132406684 - MGP_NODShiLtJ_P0067047 Tie1 protein_coding protein_coding MGP_NODShiLtJ_T0067048.1 MGP_NODShiLtJ_G0028476.1 mouse_genomes_project 4 132386773 132406990 - MGP_NODShiLtJ_P0067048 Tie1 protein_coding protein_coding MGP_NODShiLtJ_T0067049.1 MGP_NODShiLtJ_G0028476.1 mouse_genomes_project 4 132393611 132406722 - Tie1 protein_coding processed_transcript MGP_NODShiLtJ_T0007750.1 MGP_NODShiLtJ_G0006328.1 mouse_genomes_project 4 19311200 19321549 - 4930598A11Rik lincRNA lincRNA MGP_NODShiLtJ_T0007791.1 MGP_NODShiLtJ_G0006364.1 mouse_genomes_project 4 63225178 63232378 + Gm12536 lincRNA lincRNA MGP_NODShiLtJ_T0004433.1 MGP_NODShiLtJ_G0003854.1 mouse_genomes_project 4 116165885 116173747 - BB031773 antisense antisense MGP_NODShiLtJ_T0068350.1 MGP_NODShiLtJ_G0028774.1 mouse_genomes_project 4 152285344 152290041 + MGP_NODShiLtJ_P0068350 4930549C01Rik protein_coding protein_coding MGP_NODShiLtJ_T0068792.1 MGP_NODShiLtJ_G0028904.1 mouse_genomes_project 4 161522370 161531736 - MGP_NODShiLtJ_P0068792 Gm438 protein_coding protein_coding MGP_NODShiLtJ_T0014720.1 MGP_NODShiLtJ_G0012828.1 mouse_genomes_project 4 171795745 171795851 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004394.1 MGP_NODShiLtJ_G0003826.1 mouse_genomes_project 4 49643371 49652639 - Frmpd1os antisense antisense MGP_NODShiLtJ_T0100514.1 MGP_NODShiLtJ_G0038908.1 mouse_genomes_project 4 2598574 2598700 - Gm24337 snoRNA snoRNA MGP_NODShiLtJ_T0014496.1 MGP_NODShiLtJ_G0012604.1 mouse_genomes_project 4 88312593 88313870 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066270.1 MGP_NODShiLtJ_G0028327.1 mouse_genomes_project 4 119974545 120007624 + MGP_NODShiLtJ_P0066270 Dhcr24 protein_coding protein_coding MGP_NODShiLtJ_T0007926.1 MGP_NODShiLtJ_G0006462.1 mouse_genomes_project 4 148357380 148360572 + Gm26615 lincRNA lincRNA MGP_NODShiLtJ_T0100596.1 MGP_NODShiLtJ_G0038990.1 mouse_genomes_project 4 159621655 159621787 + Gm22039 snoRNA snoRNA MGP_NODShiLtJ_T0068782.1 MGP_NODShiLtJ_G0028895.1 mouse_genomes_project 4 161091329 161110385 - MGP_NODShiLtJ_P0068782 Pramef12 protein_coding protein_coding MGP_NODShiLtJ_T0068783.1 MGP_NODShiLtJ_G0028895.1 mouse_genomes_project 4 161096006 161110338 - MGP_NODShiLtJ_P0068783 Pramef12 protein_coding protein_coding MGP_NODShiLtJ_T0014583.1 MGP_NODShiLtJ_G0012691.1 mouse_genomes_project 4 122555339 122555575 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010518.1 MGP_NODShiLtJ_G0008651.1 mouse_genomes_project 4 139415593 139415702 + Mir698 miRNA miRNA MGP_NODShiLtJ_T0067905.1 MGP_NODShiLtJ_G0028674.1 mouse_genomes_project 4 147517858 147605700 - MGP_NODShiLtJ_P0067905 Phactr4 protein_coding protein_coding MGP_NODShiLtJ_T0067906.1 MGP_NODShiLtJ_G0028674.1 mouse_genomes_project 4 147517865 147605657 - MGP_NODShiLtJ_P0067906 Phactr4 protein_coding protein_coding MGP_NODShiLtJ_T0067907.1 MGP_NODShiLtJ_G0028674.1 mouse_genomes_project 4 147520197 147566074 - MGP_NODShiLtJ_P0067907 Phactr4 protein_coding protein_coding MGP_NODShiLtJ_T0067908.1 MGP_NODShiLtJ_G0028674.1 mouse_genomes_project 4 147522624 147534131 - Phactr4 protein_coding processed_transcript MGP_NODShiLtJ_T0067909.1 MGP_NODShiLtJ_G0028674.1 mouse_genomes_project 4 147534550 147605652 - MGP_NODShiLtJ_P0067909 Phactr4 protein_coding protein_coding MGP_NODShiLtJ_T0067910.1 MGP_NODShiLtJ_G0028674.1 mouse_genomes_project 4 147543672 147566062 - MGP_NODShiLtJ_P0067910 Phactr4 protein_coding protein_coding MGP_NODShiLtJ_T0101917.1 MGP_NODShiLtJ_G0040085.1 mouse_genomes_project 4 108725071 108725250 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0069256.1 MGP_NODShiLtJ_G0028991.1 mouse_genomes_project 4 171714859 171751501 + MGP_NODShiLtJ_P0069256 Cep104 protein_coding protein_coding MGP_NODShiLtJ_T0069257.1 MGP_NODShiLtJ_G0028991.1 mouse_genomes_project 4 171732249 171751501 + MGP_NODShiLtJ_P0069257 Cep104 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069258.1 MGP_NODShiLtJ_G0028991.1 mouse_genomes_project 4 171732989 171733860 + Cep104 protein_coding retained_intron MGP_NODShiLtJ_T0064299.1 MGP_NODShiLtJ_G0027855.1 mouse_genomes_project 4 5887679 5955689 + Chd7 protein_coding retained_intron MGP_NODShiLtJ_T0064300.1 MGP_NODShiLtJ_G0027855.1 mouse_genomes_project 4 5887743 5988288 + MGP_NODShiLtJ_P0064300 Chd7 protein_coding protein_coding MGP_NODShiLtJ_T0064301.1 MGP_NODShiLtJ_G0027855.1 mouse_genomes_project 4 5888194 6070984 + MGP_NODShiLtJ_P0064301 Chd7 protein_coding protein_coding MGP_NODShiLtJ_T0064302.1 MGP_NODShiLtJ_G0027855.1 mouse_genomes_project 4 5888638 6071832 + MGP_NODShiLtJ_P0064302 Chd7 protein_coding protein_coding MGP_NODShiLtJ_T0064303.1 MGP_NODShiLtJ_G0027855.1 mouse_genomes_project 4 5907644 5951345 + MGP_NODShiLtJ_P0064303 Chd7 protein_coding protein_coding MGP_NODShiLtJ_T0064304.1 MGP_NODShiLtJ_G0027855.1 mouse_genomes_project 4 5951220 6071398 + MGP_NODShiLtJ_P0064304 Chd7 protein_coding protein_coding MGP_NODShiLtJ_T0064305.1 MGP_NODShiLtJ_G0027855.1 mouse_genomes_project 4 5951287 6072916 + MGP_NODShiLtJ_P0064305 Chd7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064306.1 MGP_NODShiLtJ_G0027855.1 mouse_genomes_project 4 6044498 6048894 + Chd7 protein_coding processed_transcript MGP_NODShiLtJ_T0001400.1 MGP_NODShiLtJ_G0001319.1 mouse_genomes_project 4 169449475 169449897 - TEC TEC MGP_NODShiLtJ_T0014470.1 MGP_NODShiLtJ_G0012578.1 mouse_genomes_project 4 79081382 79081819 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014332.1 MGP_NODShiLtJ_G0012440.1 mouse_genomes_project 4 24524100 24525816 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014373.1 MGP_NODShiLtJ_G0012481.1 mouse_genomes_project 4 37532199 37532541 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014312.1 MGP_NODShiLtJ_G0012420.1 mouse_genomes_project 4 16708723 16709733 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007756.1 MGP_NODShiLtJ_G0006334.1 mouse_genomes_project 4 30603252 30629709 + Gm11917 lincRNA lincRNA MGP_NODShiLtJ_T0067191.1 MGP_NODShiLtJ_G0028516.1 mouse_genomes_project 4 134662465 134693369 - MGP_NODShiLtJ_P0067191 Ctps protein_coding protein_coding MGP_NODShiLtJ_T0067192.1 MGP_NODShiLtJ_G0028516.1 mouse_genomes_project 4 134664508 134667715 - Ctps protein_coding processed_transcript MGP_NODShiLtJ_T0067193.1 MGP_NODShiLtJ_G0028516.1 mouse_genomes_project 4 134664566 134670749 - Ctps protein_coding processed_transcript MGP_NODShiLtJ_T0064961.1 MGP_NODShiLtJ_G0028008.1 mouse_genomes_project 4 47666646 47668757 - MGP_NODShiLtJ_P0064961 Fam166b protein_coding protein_coding MGP_NODShiLtJ_T0064962.1 MGP_NODShiLtJ_G0028008.1 mouse_genomes_project 4 47666703 47668740 - MGP_NODShiLtJ_P0064962 Fam166b protein_coding protein_coding MGP_NODShiLtJ_T0064963.1 MGP_NODShiLtJ_G0028008.1 mouse_genomes_project 4 47666767 47667650 - MGP_NODShiLtJ_P0064963 Fam166b protein_coding protein_coding MGP_NODShiLtJ_T0064964.1 MGP_NODShiLtJ_G0028008.1 mouse_genomes_project 4 47666767 47668712 - MGP_NODShiLtJ_P0064964 Fam166b protein_coding protein_coding MGP_NODShiLtJ_T0064965.1 MGP_NODShiLtJ_G0028008.1 mouse_genomes_project 4 47666810 47668712 - MGP_NODShiLtJ_P0064965 Fam166b protein_coding protein_coding MGP_NODShiLtJ_T0064966.1 MGP_NODShiLtJ_G0028008.1 mouse_genomes_project 4 47667213 47668712 - MGP_NODShiLtJ_P0064966 Fam166b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069289.1 MGP_NODShiLtJ_G0028997.1 mouse_genomes_project 4 171915305 171918452 - MGP_NODShiLtJ_P0069289 Tprgl protein_coding protein_coding MGP_NODShiLtJ_T0069290.1 MGP_NODShiLtJ_G0028997.1 mouse_genomes_project 4 171915960 171918452 - Tprgl protein_coding processed_transcript MGP_NODShiLtJ_T0069291.1 MGP_NODShiLtJ_G0028997.1 mouse_genomes_project 4 171916293 171917987 - Tprgl protein_coding processed_transcript MGP_NODShiLtJ_T0069292.1 MGP_NODShiLtJ_G0028997.1 mouse_genomes_project 4 171917387 171918427 - Tprgl protein_coding processed_transcript MGP_NODShiLtJ_T0004494.1 MGP_NODShiLtJ_G0003901.1 mouse_genomes_project 4 149950153 149951748 - 1700021N21Rik antisense antisense MGP_NODShiLtJ_T0066297.1 MGP_NODShiLtJ_G0028333.1 mouse_genomes_project 4 120157637 120179101 + MGP_NODShiLtJ_P0066297 Fam151a protein_coding protein_coding MGP_NODShiLtJ_T0007765.1 MGP_NODShiLtJ_G0006343.1 mouse_genomes_project 4 47254328 47255810 + Gm26643 lincRNA lincRNA MGP_NODShiLtJ_T0067085.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133175564 133190191 - MGP_NODShiLtJ_P0067085 Ermap protein_coding protein_coding MGP_NODShiLtJ_T0067086.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133175698 133190156 - MGP_NODShiLtJ_P0067086 Ermap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067087.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133177651 133190156 - Ermap protein_coding retained_intron MGP_NODShiLtJ_T0067088.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133178659 133190136 - Ermap protein_coding processed_transcript MGP_NODShiLtJ_T0067089.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133185863 133188920 - MGP_NODShiLtJ_P0067089 Ermap protein_coding protein_coding MGP_NODShiLtJ_T0067090.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133185924 133190131 - MGP_NODShiLtJ_P0067090 Ermap protein_coding protein_coding MGP_NODShiLtJ_T0067091.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133187367 133190176 - MGP_NODShiLtJ_P0067091 Ermap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067092.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133187500 133190173 - MGP_NODShiLtJ_P0067092 Ermap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067093.1 MGP_NODShiLtJ_G0028495.1 mouse_genomes_project 4 133187508 133190191 - MGP_NODShiLtJ_P0067093 Ermap protein_coding protein_coding MGP_NODShiLtJ_T0014536.1 MGP_NODShiLtJ_G0012644.1 mouse_genomes_project 4 106801119 106801707 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007882.1 MGP_NODShiLtJ_G0006436.1 mouse_genomes_project 4 139952079 139965192 + 1700041M05Rik lincRNA lincRNA MGP_NODShiLtJ_T0066306.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120372599 120493747 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066307.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120373368 120513390 + MGP_NODShiLtJ_P0066307 Ssbp3 protein_coding protein_coding MGP_NODShiLtJ_T0066308.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120373409 120501423 + MGP_NODShiLtJ_P0066308 Ssbp3 protein_coding protein_coding MGP_NODShiLtJ_T0066309.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120373431 120512263 + MGP_NODShiLtJ_P0066309 Ssbp3 protein_coding protein_coding MGP_NODShiLtJ_T0066310.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120373565 120512199 + MGP_NODShiLtJ_P0066310 Ssbp3 protein_coding protein_coding MGP_NODShiLtJ_T0066311.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120373759 120473309 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066312.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120374196 120512216 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066313.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120385066 120493699 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066314.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120385106 120500929 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066315.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120403489 120512244 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066316.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120417517 120512388 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066317.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120428004 120493745 + MGP_NODShiLtJ_P0066317 Ssbp3 protein_coding protein_coding MGP_NODShiLtJ_T0066318.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120490869 120500044 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066319.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120493509 120494163 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066320.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120500882 120512220 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066321.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120500913 120503338 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0066322.1 MGP_NODShiLtJ_G0028335.1 mouse_genomes_project 4 120510654 120512151 + Ssbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0068329.1 MGP_NODShiLtJ_G0028770.1 mouse_genomes_project 4 152080256 152100929 + MGP_NODShiLtJ_P0068329 Htr1d protein_coding protein_coding MGP_NODShiLtJ_T0068330.1 MGP_NODShiLtJ_G0028770.1 mouse_genomes_project 4 152080258 152100291 + MGP_NODShiLtJ_P0068330 Htr1d protein_coding protein_coding MGP_NODShiLtJ_T0068331.1 MGP_NODShiLtJ_G0028770.1 mouse_genomes_project 4 152080262 152100291 + MGP_NODShiLtJ_P0068331 Htr1d protein_coding protein_coding MGP_NODShiLtJ_T0068332.1 MGP_NODShiLtJ_G0028770.1 mouse_genomes_project 4 152081330 152098496 + Htr1d protein_coding processed_transcript MGP_NODShiLtJ_T0014365.1 MGP_NODShiLtJ_G0012473.1 mouse_genomes_project 4 35341373 35341820 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066428.1 MGP_NODShiLtJ_G0028352.1 mouse_genomes_project 4 121412361 121434386 - MGP_NODShiLtJ_P0066428 Cpt2 protein_coding protein_coding MGP_NODShiLtJ_T0066429.1 MGP_NODShiLtJ_G0028352.1 mouse_genomes_project 4 121412363 121434336 - MGP_NODShiLtJ_P0066429 Cpt2 protein_coding protein_coding MGP_NODShiLtJ_T0066430.1 MGP_NODShiLtJ_G0028352.1 mouse_genomes_project 4 121417361 121434321 - MGP_NODShiLtJ_P0066430 Cpt2 protein_coding protein_coding MGP_NODShiLtJ_T0066431.1 MGP_NODShiLtJ_G0028352.1 mouse_genomes_project 4 121417448 121422492 - Cpt2 protein_coding retained_intron MGP_NODShiLtJ_T0066432.1 MGP_NODShiLtJ_G0028352.1 mouse_genomes_project 4 121417595 121434223 - Cpt2 protein_coding processed_transcript MGP_NODShiLtJ_T0066433.1 MGP_NODShiLtJ_G0028352.1 mouse_genomes_project 4 121417950 121434364 - MGP_NODShiLtJ_P0066433 Cpt2 protein_coding protein_coding MGP_NODShiLtJ_T0064745.1 MGP_NODShiLtJ_G0027962.1 mouse_genomes_project 4 44842259 44893366 - MGP_NODShiLtJ_P0064745 B4galt1 protein_coding protein_coding MGP_NODShiLtJ_T0064746.1 MGP_NODShiLtJ_G0027962.1 mouse_genomes_project 4 44846813 44893366 - MGP_NODShiLtJ_P0064746 B4galt1 protein_coding protein_coding MGP_NODShiLtJ_T0064726.1 MGP_NODShiLtJ_G0027959.1 mouse_genomes_project 4 44703961 44725473 - MGP_NODShiLtJ_P0064726 Aptx protein_coding protein_coding MGP_NODShiLtJ_T0064727.1 MGP_NODShiLtJ_G0027959.1 mouse_genomes_project 4 44703961 44725753 - MGP_NODShiLtJ_P0064727 Aptx protein_coding protein_coding MGP_NODShiLtJ_T0064728.1 MGP_NODShiLtJ_G0027959.1 mouse_genomes_project 4 44706519 44725721 - MGP_NODShiLtJ_P0064728 Aptx protein_coding protein_coding MGP_NODShiLtJ_T0064729.1 MGP_NODShiLtJ_G0027959.1 mouse_genomes_project 4 44707716 44725746 - MGP_NODShiLtJ_P0064729 Aptx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064730.1 MGP_NODShiLtJ_G0027959.1 mouse_genomes_project 4 44713960 44717100 - Aptx protein_coding processed_transcript MGP_NODShiLtJ_T0064731.1 MGP_NODShiLtJ_G0027959.1 mouse_genomes_project 4 44717612 44725275 - MGP_NODShiLtJ_P0064731 Aptx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004413.1 MGP_NODShiLtJ_G0003844.1 mouse_genomes_project 4 99060944 99062442 + Gm12631 antisense antisense MGP_NODShiLtJ_T0065857.1 MGP_NODShiLtJ_G0028219.1 mouse_genomes_project 4 97316412 97412788 - Saxo1 protein_coding processed_transcript MGP_NODShiLtJ_T0065858.1 MGP_NODShiLtJ_G0028219.1 mouse_genomes_project 4 97316412 97432859 - MGP_NODShiLtJ_P0065858 Saxo1 protein_coding protein_coding MGP_NODShiLtJ_T0065859.1 MGP_NODShiLtJ_G0028219.1 mouse_genomes_project 4 97350482 97432551 - Saxo1 protein_coding processed_transcript MGP_NODShiLtJ_T0065860.1 MGP_NODShiLtJ_G0028219.1 mouse_genomes_project 4 97353023 97432884 - Saxo1 protein_coding processed_transcript MGP_NODShiLtJ_T0007945.1 MGP_NODShiLtJ_G0006477.1 mouse_genomes_project 4 156518860 156524278 + Gm13017 lincRNA lincRNA MGP_NODShiLtJ_T0101133.1 MGP_NODShiLtJ_G0039468.1 mouse_genomes_project 4 48436456 48438687 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101134.1 MGP_NODShiLtJ_G0039468.1 mouse_genomes_project 4 48437801 48438107 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0014500.1 MGP_NODShiLtJ_G0012608.1 mouse_genomes_project 4 90147200 90148343 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064394.1 MGP_NODShiLtJ_G0027871.1 mouse_genomes_project 4 9293349 9354614 + MGP_NODShiLtJ_P0064394 Cdh17 protein_coding protein_coding MGP_NODShiLtJ_T0064395.1 MGP_NODShiLtJ_G0027871.1 mouse_genomes_project 4 9293395 9344848 + MGP_NODShiLtJ_P0064395 Cdh17 protein_coding protein_coding MGP_NODShiLtJ_T0007874.1 MGP_NODShiLtJ_G0006432.1 mouse_genomes_project 4 138940122 138948755 - 1700021L23Rik lincRNA lincRNA MGP_NODShiLtJ_T0014327.1 MGP_NODShiLtJ_G0012435.1 mouse_genomes_project 4 22398520 22399222 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065965.1 MGP_NODShiLtJ_G0028257.1 mouse_genomes_project 4 106909717 106983523 - MGP_NODShiLtJ_P0065965 Caap1 protein_coding protein_coding MGP_NODShiLtJ_T0065966.1 MGP_NODShiLtJ_G0028257.1 mouse_genomes_project 4 106975798 106983493 - Caap1 protein_coding processed_transcript MGP_NODShiLtJ_T0066023.1 MGP_NODShiLtJ_G0028267.1 mouse_genomes_project 4 108562174 108597381 - MGP_NODShiLtJ_P0066023 Cyp2j13 protein_coding protein_coding MGP_NODShiLtJ_T0066024.1 MGP_NODShiLtJ_G0028267.1 mouse_genomes_project 4 108582456 108612672 - MGP_NODShiLtJ_P0066024 Cyp2j13 protein_coding protein_coding MGP_NODShiLtJ_T0066025.1 MGP_NODShiLtJ_G0028267.1 mouse_genomes_project 4 108585027 108612678 - MGP_NODShiLtJ_P0066025 Cyp2j13 protein_coding protein_coding MGP_NODShiLtJ_T0066026.1 MGP_NODShiLtJ_G0028267.1 mouse_genomes_project 4 108585027 108612656 - MGP_NODShiLtJ_P0066026 Cyp2j13 protein_coding protein_coding MGP_NODShiLtJ_T0100537.1 MGP_NODShiLtJ_G0038931.1 mouse_genomes_project 4 57004873 57004982 + Gm23043 snoRNA snoRNA MGP_NODShiLtJ_T0065948.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102799063 102922204 - MGP_NODShiLtJ_P0065948 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065949.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102799063 102922219 - MGP_NODShiLtJ_P0065949 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065950.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102799063 102922184 - MGP_NODShiLtJ_P0065950 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065951.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102799063 102953802 - MGP_NODShiLtJ_P0065951 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065952.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102801380 102802883 - Elavl2 protein_coding retained_intron MGP_NODShiLtJ_T0065953.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102801540 102860663 - MGP_NODShiLtJ_P0065953 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065954.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102801540 102862430 - MGP_NODShiLtJ_P0065954 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065955.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102806966 102926454 - Elavl2 protein_coding retained_intron MGP_NODShiLtJ_T0065956.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102812401 102906836 - MGP_NODShiLtJ_P0065956 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065957.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102857695 102923180 - MGP_NODShiLtJ_P0065957 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065958.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102857789 102922106 - MGP_NODShiLtJ_P0065958 Elavl2 protein_coding protein_coding MGP_NODShiLtJ_T0065959.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102930574 102953794 - Elavl2 protein_coding processed_transcript MGP_NODShiLtJ_T0065960.1 MGP_NODShiLtJ_G0028254.1 mouse_genomes_project 4 102953712 102954588 - Elavl2 protein_coding processed_transcript MGP_NODShiLtJ_T0068533.1 MGP_NODShiLtJ_G0028821.1 mouse_genomes_project 4 155372824 155399534 + MGP_NODShiLtJ_P0068533 Emc1 protein_coding protein_coding MGP_NODShiLtJ_T0068534.1 MGP_NODShiLtJ_G0028821.1 mouse_genomes_project 4 155372830 155399534 + MGP_NODShiLtJ_P0068534 Emc1 protein_coding protein_coding MGP_NODShiLtJ_T0068535.1 MGP_NODShiLtJ_G0028821.1 mouse_genomes_project 4 155372830 155399534 + MGP_NODShiLtJ_P0068535 Emc1 protein_coding protein_coding MGP_NODShiLtJ_T0068536.1 MGP_NODShiLtJ_G0028821.1 mouse_genomes_project 4 155372846 155374702 + Emc1 protein_coding processed_transcript MGP_NODShiLtJ_T0068538.1 MGP_NODShiLtJ_G0028821.1 mouse_genomes_project 4 155380111 155396731 + Emc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067594.1 MGP_NODShiLtJ_G0028618.1 mouse_genomes_project 4 144181574 144189163 + MGP_NODShiLtJ_P0067594 Fndc5 protein_coding protein_coding MGP_NODShiLtJ_T0014432.1 MGP_NODShiLtJ_G0012540.1 mouse_genomes_project 4 59522750 59523154 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014708.1 MGP_NODShiLtJ_G0012816.1 mouse_genomes_project 4 165212771 165213231 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097805.1 MGP_NODShiLtJ_G0036217.1 mouse_genomes_project 4 3417792 3420652 - pseudogene pseudogene MGP_NODShiLtJ_T0066239.1 MGP_NODShiLtJ_G0028315.1 mouse_genomes_project 4 116495929 116553347 + MGP_NODShiLtJ_P0066239 Oma1 protein_coding protein_coding MGP_NODShiLtJ_T0066240.1 MGP_NODShiLtJ_G0028315.1 mouse_genomes_project 4 116509720 116515357 + Oma1 protein_coding processed_transcript MGP_NODShiLtJ_T0066241.1 MGP_NODShiLtJ_G0028315.1 mouse_genomes_project 4 116515375 116558772 + Oma1 protein_coding processed_transcript MGP_NODShiLtJ_T0014666.1 MGP_NODShiLtJ_G0012774.1 mouse_genomes_project 4 149673127 149673448 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014445.1 MGP_NODShiLtJ_G0012553.1 mouse_genomes_project 4 63350324 63350810 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068192.1 MGP_NODShiLtJ_G0028741.1 mouse_genomes_project 4 150469017 150473097 + Rsrp1 protein_coding retained_intron MGP_NODShiLtJ_T0068193.1 MGP_NODShiLtJ_G0028741.1 mouse_genomes_project 4 150469017 150473097 + MGP_NODShiLtJ_P0068193 Rsrp1 protein_coding protein_coding MGP_NODShiLtJ_T0068194.1 MGP_NODShiLtJ_G0028741.1 mouse_genomes_project 4 150469018 150470849 + Rsrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0068195.1 MGP_NODShiLtJ_G0028741.1 mouse_genomes_project 4 150469051 150470759 + Rsrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0068196.1 MGP_NODShiLtJ_G0028741.1 mouse_genomes_project 4 150469070 150472798 + Rsrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0068197.1 MGP_NODShiLtJ_G0028741.1 mouse_genomes_project 4 150469885 150472798 + Rsrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0068198.1 MGP_NODShiLtJ_G0028741.1 mouse_genomes_project 4 150470135 150470781 + Rsrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0068199.1 MGP_NODShiLtJ_G0028741.1 mouse_genomes_project 4 150470871 150472379 + Rsrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0014523.1 MGP_NODShiLtJ_G0012631.1 mouse_genomes_project 4 101725445 101726437 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100576.1 MGP_NODShiLtJ_G0038970.1 mouse_genomes_project 4 135234750 135234875 - Gm26186 snoRNA snoRNA MGP_NODShiLtJ_T0066478.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122031978 122053452 + MGP_NODShiLtJ_P0066478 Zcchc11 protein_coding protein_coding MGP_NODShiLtJ_T0066479.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122031978 122147721 + MGP_NODShiLtJ_P0066479 Zcchc11 protein_coding protein_coding MGP_NODShiLtJ_T0066480.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122032562 122147727 + MGP_NODShiLtJ_P0066480 Zcchc11 protein_coding protein_coding MGP_NODShiLtJ_T0066481.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122053379 122105160 + MGP_NODShiLtJ_P0066481 Zcchc11 protein_coding protein_coding MGP_NODShiLtJ_T0066482.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122127408 122134258 + Zcchc11 protein_coding processed_transcript MGP_NODShiLtJ_T0066483.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122127507 122128375 + Zcchc11 protein_coding processed_transcript MGP_NODShiLtJ_T0066484.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122127560 122128368 + Zcchc11 protein_coding processed_transcript MGP_NODShiLtJ_T0066485.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122135056 122140775 + Zcchc11 protein_coding processed_transcript MGP_NODShiLtJ_T0066486.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122140791 122147721 + Zcchc11 protein_coding processed_transcript MGP_NODShiLtJ_T0066487.1 MGP_NODShiLtJ_G0028362.1 mouse_genomes_project 4 122141075 122145982 + MGP_NODShiLtJ_P0066487 Zcchc11 protein_coding protein_coding MGP_NODShiLtJ_T0014623.1 MGP_NODShiLtJ_G0012731.1 mouse_genomes_project 4 135291848 135292271 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100575.1 MGP_NODShiLtJ_G0038969.1 mouse_genomes_project 4 132962306 132962431 + Gm24352 snoRNA snoRNA MGP_NODShiLtJ_T0067409.1 MGP_NODShiLtJ_G0028577.1 mouse_genomes_project 4 140929605 140941673 - Sh3d21 protein_coding processed_transcript MGP_NODShiLtJ_T0067410.1 MGP_NODShiLtJ_G0028577.1 mouse_genomes_project 4 140929605 140941634 - MGP_NODShiLtJ_P0067410 Sh3d21 protein_coding protein_coding MGP_NODShiLtJ_T0067411.1 MGP_NODShiLtJ_G0028577.1 mouse_genomes_project 4 140929605 140942499 - MGP_NODShiLtJ_P0067411 Sh3d21 protein_coding protein_coding MGP_NODShiLtJ_T0067412.1 MGP_NODShiLtJ_G0028577.1 mouse_genomes_project 4 140929611 140941609 - Sh3d21 protein_coding processed_transcript MGP_NODShiLtJ_T0067413.1 MGP_NODShiLtJ_G0028577.1 mouse_genomes_project 4 140930560 140941664 - Sh3d21 protein_coding processed_transcript MGP_NODShiLtJ_T0067441.1 MGP_NODShiLtJ_G0028583.1 mouse_genomes_project 4 141122814 141126358 - MGP_NODShiLtJ_P0067441 Tekt2 protein_coding protein_coding MGP_NODShiLtJ_T0067442.1 MGP_NODShiLtJ_G0028583.1 mouse_genomes_project 4 141122816 141125886 - MGP_NODShiLtJ_P0067442 Tekt2 protein_coding protein_coding MGP_NODShiLtJ_T0067443.1 MGP_NODShiLtJ_G0028583.1 mouse_genomes_project 4 141124401 141126300 - Tekt2 protein_coding retained_intron MGP_NODShiLtJ_T0067444.1 MGP_NODShiLtJ_G0028583.1 mouse_genomes_project 4 141125026 141126313 - MGP_NODShiLtJ_P0067444 Tekt2 protein_coding protein_coding MGP_NODShiLtJ_T0067445.1 MGP_NODShiLtJ_G0028583.1 mouse_genomes_project 4 141125570 141126122 - MGP_NODShiLtJ_P0067445 Tekt2 protein_coding protein_coding MGP_NODShiLtJ_T0004509.1 MGP_NODShiLtJ_G0003914.1 mouse_genomes_project 4 157140262 157150464 - Gm13031 antisense antisense MGP_NODShiLtJ_T0014376.1 MGP_NODShiLtJ_G0012484.1 mouse_genomes_project 4 38743024 38743966 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101922.1 MGP_NODShiLtJ_G0040090.1 mouse_genomes_project 4 126409836 126410883 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0065577.1 MGP_NODShiLtJ_G0028159.1 mouse_genomes_project 4 68831861 68850065 + MGP_NODShiLtJ_P0065577 Prpf4 protein_coding protein_coding MGP_NODShiLtJ_T0065578.1 MGP_NODShiLtJ_G0028159.1 mouse_genomes_project 4 68844918 68846406 + Prpf4 protein_coding processed_transcript MGP_NODShiLtJ_T0014452.1 MGP_NODShiLtJ_G0012560.1 mouse_genomes_project 4 69125758 69139876 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007846.1 MGP_NODShiLtJ_G0006410.1 mouse_genomes_project 4 116465342 116492342 + 4930456L15Rik lincRNA lincRNA MGP_NODShiLtJ_T0004458.1 MGP_NODShiLtJ_G0003872.1 mouse_genomes_project 4 131290262 131301832 + Gm12828 antisense antisense MGP_NODShiLtJ_T0067143.1 MGP_NODShiLtJ_G0028505.1 mouse_genomes_project 4 133453039 133485431 + MGP_NODShiLtJ_P0067143 Zmynd12 protein_coding protein_coding MGP_NODShiLtJ_T0067144.1 MGP_NODShiLtJ_G0028505.1 mouse_genomes_project 4 133453097 133481764 + Zmynd12 protein_coding processed_transcript MGP_NODShiLtJ_T0067145.1 MGP_NODShiLtJ_G0028505.1 mouse_genomes_project 4 133474905 133499640 + Zmynd12 protein_coding processed_transcript MGP_NODShiLtJ_T0014409.1 MGP_NODShiLtJ_G0012517.1 mouse_genomes_project 4 51745153 51745288 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065458.1 MGP_NODShiLtJ_G0028123.1 mouse_genomes_project 4 63109865 63226920 - MGP_NODShiLtJ_P0065458 Ptpn3 protein_coding protein_coding MGP_NODShiLtJ_T0065459.1 MGP_NODShiLtJ_G0028123.1 mouse_genomes_project 4 63137200 63140909 - Ptpn3 protein_coding processed_transcript MGP_NODShiLtJ_T0065460.1 MGP_NODShiLtJ_G0028123.1 mouse_genomes_project 4 63165119 63225458 - MGP_NODShiLtJ_P0065460 Ptpn3 protein_coding protein_coding MGP_NODShiLtJ_T0065461.1 MGP_NODShiLtJ_G0028123.1 mouse_genomes_project 4 63174977 63225998 - Ptpn3 protein_coding processed_transcript MGP_NODShiLtJ_T0065462.1 MGP_NODShiLtJ_G0028123.1 mouse_genomes_project 4 63186546 63226590 - MGP_NODShiLtJ_P0065462 Ptpn3 protein_coding protein_coding MGP_NODShiLtJ_T0065463.1 MGP_NODShiLtJ_G0028123.1 mouse_genomes_project 4 63192283 63225839 - MGP_NODShiLtJ_P0065463 Ptpn3 protein_coding protein_coding MGP_NODShiLtJ_T0014296.1 MGP_NODShiLtJ_G0012404.1 mouse_genomes_project 4 13495044 13495486 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098384.1 MGP_NODShiLtJ_G0036789.1 mouse_genomes_project 4 145793590 145798385 + Gm12971 sense_intronic sense_intronic MGP_NODShiLtJ_T0069234.1 MGP_NODShiLtJ_G0028987.1 mouse_genomes_project 4 170053873 170142789 + Nphp4 protein_coding processed_transcript MGP_NODShiLtJ_T0069235.1 MGP_NODShiLtJ_G0028987.1 mouse_genomes_project 4 170055067 170142518 + MGP_NODShiLtJ_P0069235 Nphp4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069236.1 MGP_NODShiLtJ_G0028987.1 mouse_genomes_project 4 170055309 170142923 + MGP_NODShiLtJ_P0069236 Nphp4 protein_coding protein_coding MGP_NODShiLtJ_T0069237.1 MGP_NODShiLtJ_G0028987.1 mouse_genomes_project 4 170055345 170067609 + Nphp4 protein_coding processed_transcript MGP_NODShiLtJ_T0069238.1 MGP_NODShiLtJ_G0028987.1 mouse_genomes_project 4 170061537 170142787 + MGP_NODShiLtJ_P0069238 Nphp4 protein_coding protein_coding MGP_NODShiLtJ_T0069239.1 MGP_NODShiLtJ_G0028987.1 mouse_genomes_project 4 170065513 170075651 + Nphp4 protein_coding processed_transcript MGP_NODShiLtJ_T0069240.1 MGP_NODShiLtJ_G0028987.1 mouse_genomes_project 4 170080323 170097785 + Nphp4 protein_coding processed_transcript MGP_NODShiLtJ_T0064643.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37060570 37109427 - MGP_NODShiLtJ_P0064643 Orc3 protein_coding protein_coding MGP_NODShiLtJ_T0064644.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37060570 37109396 - MGP_NODShiLtJ_P0064644 Orc3 protein_coding protein_coding MGP_NODShiLtJ_T0064645.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37061339 37090103 - Orc3 protein_coding processed_transcript MGP_NODShiLtJ_T0064646.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37062865 37067368 - Orc3 protein_coding processed_transcript MGP_NODShiLtJ_T0064647.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37068114 37109394 - Orc3 protein_coding processed_transcript MGP_NODShiLtJ_T0064648.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37083919 37086582 - Orc3 protein_coding processed_transcript MGP_NODShiLtJ_T0064649.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37084445 37109376 - MGP_NODShiLtJ_P0064649 Orc3 protein_coding protein_coding MGP_NODShiLtJ_T0064650.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37090053 37109386 - Orc3 protein_coding processed_transcript MGP_NODShiLtJ_T0064651.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37090141 37109392 - Orc3 protein_coding processed_transcript MGP_NODShiLtJ_T0064652.1 MGP_NODShiLtJ_G0027940.1 mouse_genomes_project 4 37090727 37109387 - Orc3 protein_coding processed_transcript MGP_NODShiLtJ_T0100593.1 MGP_NODShiLtJ_G0038987.1 mouse_genomes_project 4 147513368 147513573 - Snora73a snoRNA snoRNA MGP_NODShiLtJ_T0064298.1 MGP_NODShiLtJ_G0027854.1 mouse_genomes_project 4 5731697 5809459 + MGP_NODShiLtJ_P0064298 Rab2a protein_coding protein_coding MGP_NODShiLtJ_T0068237.1 MGP_NODShiLtJ_G0028748.1 mouse_genomes_project 4 151027212 151073380 - MGP_NODShiLtJ_P0068237 Nipal3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068238.1 MGP_NODShiLtJ_G0028748.1 mouse_genomes_project 4 151027929 151073380 - MGP_NODShiLtJ_P0068238 Nipal3 protein_coding protein_coding MGP_NODShiLtJ_T0068239.1 MGP_NODShiLtJ_G0028748.1 mouse_genomes_project 4 151031747 151073497 - MGP_NODShiLtJ_P0068239 Nipal3 protein_coding protein_coding MGP_NODShiLtJ_T0068240.1 MGP_NODShiLtJ_G0028748.1 mouse_genomes_project 4 151036250 151051758 - MGP_NODShiLtJ_P0068240 Nipal3 protein_coding protein_coding MGP_NODShiLtJ_T0068241.1 MGP_NODShiLtJ_G0028748.1 mouse_genomes_project 4 151036541 151039428 - Nipal3 protein_coding processed_transcript MGP_NODShiLtJ_T0068242.1 MGP_NODShiLtJ_G0028748.1 mouse_genomes_project 4 151036631 151039700 - Nipal3 protein_coding processed_transcript MGP_NODShiLtJ_T0068243.1 MGP_NODShiLtJ_G0028748.1 mouse_genomes_project 4 151057329 151073843 - MGP_NODShiLtJ_P0068243 Nipal3 protein_coding protein_coding MGP_NODShiLtJ_T0068244.1 MGP_NODShiLtJ_G0028748.1 mouse_genomes_project 4 151060246 151073912 - MGP_NODShiLtJ_P0068244 Nipal3 protein_coding protein_coding MGP_NODShiLtJ_T0099260.1 MGP_NODShiLtJ_G0037654.1 mouse_genomes_project 4 47434161 47434226 - Gm25010 snRNA snRNA MGP_NODShiLtJ_T0004405.1 MGP_NODShiLtJ_G0003836.1 mouse_genomes_project 4 69063041 69069952 - Gm11209 antisense antisense MGP_NODShiLtJ_T0068031.1 MGP_NODShiLtJ_G0028705.1 mouse_genomes_project 4 148941201 148972797 - MGP_NODShiLtJ_P0068031 Zdhhc18 protein_coding protein_coding MGP_NODShiLtJ_T0068032.1 MGP_NODShiLtJ_G0028705.1 mouse_genomes_project 4 148944567 148951476 - Zdhhc18 protein_coding retained_intron MGP_NODShiLtJ_T0068033.1 MGP_NODShiLtJ_G0028705.1 mouse_genomes_project 4 148944637 148948942 - Zdhhc18 protein_coding processed_transcript MGP_NODShiLtJ_T0068034.1 MGP_NODShiLtJ_G0028705.1 mouse_genomes_project 4 148949223 148951251 - Zdhhc18 protein_coding retained_intron MGP_NODShiLtJ_T0068035.1 MGP_NODShiLtJ_G0028705.1 mouse_genomes_project 4 148966738 148990826 - Zdhhc18 protein_coding processed_transcript MGP_NODShiLtJ_T0067050.1 MGP_NODShiLtJ_G0028477.1 mouse_genomes_project 4 132440051 132442909 + MGP_NODShiLtJ_P0067050 2610528J11Rik protein_coding protein_coding MGP_NODShiLtJ_T0067051.1 MGP_NODShiLtJ_G0028477.1 mouse_genomes_project 4 132440295 132443282 + MGP_NODShiLtJ_P0067051 2610528J11Rik protein_coding protein_coding MGP_NODShiLtJ_T0007783.1 MGP_NODShiLtJ_G0006357.1 mouse_genomes_project 4 60362657 60395121 + Gm12478 lincRNA lincRNA MGP_NODShiLtJ_T0007845.1 MGP_NODShiLtJ_G0006409.1 mouse_genomes_project 4 116390084 116392252 + Gm44037 lincRNA lincRNA MGP_NODShiLtJ_T0011467.1 MGP_NODShiLtJ_G0009600.1 mouse_genomes_project 4 119366321 119366632 - Gm24363 misc_RNA misc_RNA MGP_NODShiLtJ_T0067356.1 MGP_NODShiLtJ_G0028563.1 mouse_genomes_project 4 139604888 139621663 - MGP_NODShiLtJ_P0067356 Cdca8 protein_coding protein_coding MGP_NODShiLtJ_T0067357.1 MGP_NODShiLtJ_G0028563.1 mouse_genomes_project 4 139605534 139621619 - MGP_NODShiLtJ_P0067357 Cdca8 protein_coding protein_coding MGP_NODShiLtJ_T0067358.1 MGP_NODShiLtJ_G0028563.1 mouse_genomes_project 4 139605979 139621153 - Cdca8 protein_coding processed_transcript MGP_NODShiLtJ_T0067359.1 MGP_NODShiLtJ_G0028563.1 mouse_genomes_project 4 139610047 139621527 - Cdca8 protein_coding processed_transcript MGP_NODShiLtJ_T0067360.1 MGP_NODShiLtJ_G0028563.1 mouse_genomes_project 4 139610227 139621588 - Cdca8 protein_coding retained_intron MGP_NODShiLtJ_T0067361.1 MGP_NODShiLtJ_G0028563.1 mouse_genomes_project 4 139613102 139624057 - MGP_NODShiLtJ_P0067361 Cdca8 protein_coding protein_coding MGP_NODShiLtJ_T0014539.1 MGP_NODShiLtJ_G0012647.1 mouse_genomes_project 4 107514275 107514739 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100525.1 MGP_NODShiLtJ_G0038919.1 mouse_genomes_project 4 40503276 40503397 + Gm22732 snoRNA snoRNA MGP_NODShiLtJ_T0099302.1 MGP_NODShiLtJ_G0037696.1 mouse_genomes_project 4 138972729 138972833 - Gm22983 snRNA snRNA MGP_NODShiLtJ_T0067389.1 MGP_NODShiLtJ_G0028572.1 mouse_genomes_project 4 140822864 140831474 + MGP_NODShiLtJ_P0067389 Mrps15 protein_coding protein_coding MGP_NODShiLtJ_T0067390.1 MGP_NODShiLtJ_G0028572.1 mouse_genomes_project 4 140822916 140827905 + Mrps15 protein_coding processed_transcript MGP_NODShiLtJ_T0067391.1 MGP_NODShiLtJ_G0028572.1 mouse_genomes_project 4 140823173 140826423 + Mrps15 protein_coding processed_transcript MGP_NODShiLtJ_T0068587.1 MGP_NODShiLtJ_G0028836.1 mouse_genomes_project 4 157103479 157145159 + MGP_NODShiLtJ_P0068587 Padi2 protein_coding protein_coding MGP_NODShiLtJ_T0068588.1 MGP_NODShiLtJ_G0028836.1 mouse_genomes_project 4 157120866 157129513 + Padi2 protein_coding processed_transcript MGP_NODShiLtJ_T0068589.1 MGP_NODShiLtJ_G0028836.1 mouse_genomes_project 4 157139147 157142310 + Padi2 protein_coding processed_transcript MGP_NODShiLtJ_T0014643.1 MGP_NODShiLtJ_G0012751.1 mouse_genomes_project 4 141288840 141289156 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067709.1 MGP_NODShiLtJ_G0028639.1 mouse_genomes_project 4 144709671 144724429 - MGP_NODShiLtJ_P0067709 Txlna protein_coding protein_coding MGP_NODShiLtJ_T0067710.1 MGP_NODShiLtJ_G0028639.1 mouse_genomes_project 4 144709676 144724004 - Txlna protein_coding retained_intron MGP_NODShiLtJ_T0067711.1 MGP_NODShiLtJ_G0028639.1 mouse_genomes_project 4 144709676 144724169 - MGP_NODShiLtJ_P0067711 Txlna protein_coding protein_coding MGP_NODShiLtJ_T0067712.1 MGP_NODShiLtJ_G0028639.1 mouse_genomes_project 4 144715760 144724429 - MGP_NODShiLtJ_P0067712 Txlna protein_coding protein_coding MGP_NODShiLtJ_T0067713.1 MGP_NODShiLtJ_G0028639.1 mouse_genomes_project 4 144717975 144724342 - MGP_NODShiLtJ_P0067713 Txlna protein_coding protein_coding MGP_NODShiLtJ_T0067714.1 MGP_NODShiLtJ_G0028639.1 mouse_genomes_project 4 144717991 144724323 - MGP_NODShiLtJ_P0067714 Txlna protein_coding protein_coding MGP_NODShiLtJ_T0067715.1 MGP_NODShiLtJ_G0028639.1 mouse_genomes_project 4 144722825 144724324 - MGP_NODShiLtJ_P0067715 Txlna protein_coding protein_coding MGP_NODShiLtJ_T0004466.1 MGP_NODShiLtJ_G0003880.1 mouse_genomes_project 4 134396201 134408464 + Foxo6os antisense antisense MGP_NODShiLtJ_T0001395.1 MGP_NODShiLtJ_G0001315.1 mouse_genomes_project 4 157468318 157469593 - TEC TEC MGP_NODShiLtJ_T0001396.1 MGP_NODShiLtJ_G0001315.1 mouse_genomes_project 4 157468324 157469593 - TEC TEC MGP_NODShiLtJ_T0067871.1 MGP_NODShiLtJ_G0028667.1 mouse_genomes_project 4 147243579 147278204 - MGP_NODShiLtJ_P0067871 Oprd1 protein_coding protein_coding MGP_NODShiLtJ_T0014650.1 MGP_NODShiLtJ_G0012758.1 mouse_genomes_project 4 141926164 141931817 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017927.1 MGP_NODShiLtJ_G0015433.1 mouse_genomes_project 4 123333926 123341083 - 9630013D21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017928.1 MGP_NODShiLtJ_G0015433.1 mouse_genomes_project 4 123334881 123341109 - 9630013D21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017929.1 MGP_NODShiLtJ_G0015433.1 mouse_genomes_project 4 123336454 123340864 - 9630013D21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0014549.1 MGP_NODShiLtJ_G0012657.1 mouse_genomes_project 4 112330428 112330825 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098378.1 MGP_NODShiLtJ_G0036783.1 mouse_genomes_project 4 65210999 65213394 - Gm12594 sense_intronic sense_intronic MGP_NODShiLtJ_T0069250.1 MGP_NODShiLtJ_G0028990.1 mouse_genomes_project 4 171703088 171710525 - MGP_NODShiLtJ_P0069250 Dffb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069251.1 MGP_NODShiLtJ_G0028990.1 mouse_genomes_project 4 171703096 171714792 - MGP_NODShiLtJ_P0069251 Dffb protein_coding protein_coding MGP_NODShiLtJ_T0069252.1 MGP_NODShiLtJ_G0028990.1 mouse_genomes_project 4 171707720 171714717 - Dffb protein_coding processed_transcript MGP_NODShiLtJ_T0069253.1 MGP_NODShiLtJ_G0028990.1 mouse_genomes_project 4 171711952 171714655 - MGP_NODShiLtJ_P0069253 Dffb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069254.1 MGP_NODShiLtJ_G0028990.1 mouse_genomes_project 4 171712284 171714723 - Dffb protein_coding retained_intron MGP_NODShiLtJ_T0069255.1 MGP_NODShiLtJ_G0028990.1 mouse_genomes_project 4 171714168 171714747 - Dffb protein_coding retained_intron MGP_NODShiLtJ_T0014486.1 MGP_NODShiLtJ_G0012594.1 mouse_genomes_project 4 84093518 84094233 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065720.1 MGP_NODShiLtJ_G0028198.1 mouse_genomes_project 4 82694215 82899662 + MGP_NODShiLtJ_P0065720 protein_coding protein_coding MGP_NODShiLtJ_T0065721.1 MGP_NODShiLtJ_G0028198.1 mouse_genomes_project 4 82705008 82899662 + MGP_NODShiLtJ_P0065721 protein_coding protein_coding MGP_NODShiLtJ_T0065722.1 MGP_NODShiLtJ_G0028198.1 mouse_genomes_project 4 82715742 82727507 + protein_coding processed_transcript MGP_NODShiLtJ_T0065723.1 MGP_NODShiLtJ_G0028198.1 mouse_genomes_project 4 82715742 82723531 + protein_coding processed_transcript MGP_NODShiLtJ_T0004402.1 MGP_NODShiLtJ_G0003833.1 mouse_genomes_project 4 66052158 66057095 - Gm12542 antisense antisense MGP_NODShiLtJ_T0069045.1 MGP_NODShiLtJ_G0028955.1 mouse_genomes_project 4 167496106 167515991 + MGP_NODShiLtJ_P0069045 Slc2a7 protein_coding protein_coding MGP_NODShiLtJ_T0069046.1 MGP_NODShiLtJ_G0028955.1 mouse_genomes_project 4 167504571 167505444 + Slc2a7 protein_coding retained_intron MGP_NODShiLtJ_T0066770.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129824809 129839832 + Pomgnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0066772.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129838218 129861339 + MGP_NODShiLtJ_P0066772 Pomgnt1 protein_coding protein_coding MGP_NODShiLtJ_T0066773.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129838233 129861340 + Pomgnt1 protein_coding retained_intron MGP_NODShiLtJ_T0066775.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129838736 129861335 + MGP_NODShiLtJ_P0066775 Pomgnt1 protein_coding protein_coding MGP_NODShiLtJ_T0066776.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129852008 129861335 + MGP_NODShiLtJ_P0066776 Pomgnt1 protein_coding protein_coding MGP_NODShiLtJ_T0066777.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129852015 129861335 + MGP_NODShiLtJ_P0066777 Pomgnt1 protein_coding protein_coding MGP_NODShiLtJ_T0066778.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129852921 129860928 + MGP_NODShiLtJ_P0066778 Pomgnt1 protein_coding protein_coding MGP_NODShiLtJ_T0066779.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129856085 129857283 + Pomgnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0066780.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129856809 129860485 + Pomgnt1 protein_coding retained_intron MGP_NODShiLtJ_T0066781.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129857427 129858144 + Pomgnt1 protein_coding retained_intron MGP_NODShiLtJ_T0066782.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129857439 129860549 + Pomgnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0066783.1 MGP_NODShiLtJ_G0028425.1 mouse_genomes_project 4 129858882 129860516 + Pomgnt1 protein_coding retained_intron MGP_NODShiLtJ_T0007908.1 MGP_NODShiLtJ_G0006452.1 mouse_genomes_project 4 146029186 146062380 + Gm12973 lincRNA lincRNA MGP_NODShiLtJ_T0067275.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137734580 137763307 + Pabpc4 protein_coding processed_transcript MGP_NODShiLtJ_T0067276.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137756065 137784181 + MGP_NODShiLtJ_P0067276 Pabpc4 protein_coding protein_coding MGP_NODShiLtJ_T0067277.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137756107 137784638 + MGP_NODShiLtJ_P0067277 Pabpc4 protein_coding protein_coding MGP_NODShiLtJ_T0067278.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137756114 137784180 + MGP_NODShiLtJ_P0067278 Pabpc4 protein_coding protein_coding MGP_NODShiLtJ_T0067279.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137756127 137784170 + MGP_NODShiLtJ_P0067279 Pabpc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067280.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137756390 137784180 + MGP_NODShiLtJ_P0067280 Pabpc4 protein_coding protein_coding MGP_NODShiLtJ_T0067281.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137756937 137784172 + MGP_NODShiLtJ_P0067281 Pabpc4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067282.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137780311 137783354 + Pabpc4 protein_coding processed_transcript MGP_NODShiLtJ_T0067283.1 MGP_NODShiLtJ_G0028543.1 mouse_genomes_project 4 137782527 137784180 + Pabpc4 protein_coding retained_intron MGP_NODShiLtJ_T0014342.1 MGP_NODShiLtJ_G0012450.1 mouse_genomes_project 4 27228612 27229290 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066690.1 MGP_NODShiLtJ_G0028407.1 mouse_genomes_project 4 129102965 129113900 - MGP_NODShiLtJ_P0066690 Cyp4a14 protein_coding protein_coding MGP_NODShiLtJ_T0066691.1 MGP_NODShiLtJ_G0028407.1 mouse_genomes_project 4 129111805 129113898 - Cyp4a14 protein_coding processed_transcript MGP_NODShiLtJ_T0014416.1 MGP_NODShiLtJ_G0012524.1 mouse_genomes_project 4 54199822 54215620 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068612.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157272689 157284534 - Necap2 protein_coding processed_transcript MGP_NODShiLtJ_T0068613.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157272689 157284549 - MGP_NODShiLtJ_P0068613 Necap2 protein_coding protein_coding MGP_NODShiLtJ_T0068614.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157273529 157281238 - Necap2 protein_coding retained_intron MGP_NODShiLtJ_T0068615.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157273577 157275022 - Necap2 protein_coding retained_intron MGP_NODShiLtJ_T0068616.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157273696 157278025 - Necap2 protein_coding retained_intron MGP_NODShiLtJ_T0068617.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157273743 157279891 - MGP_NODShiLtJ_P0068617 Necap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068618.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157274388 157284549 - Necap2 protein_coding processed_transcript MGP_NODShiLtJ_T0068619.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157276268 157284549 - Necap2 protein_coding processed_transcript MGP_NODShiLtJ_T0068620.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157276338 157277959 - Necap2 protein_coding retained_intron MGP_NODShiLtJ_T0068621.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157276366 157284486 - Necap2 protein_coding retained_intron MGP_NODShiLtJ_T0068622.1 MGP_NODShiLtJ_G0028841.1 mouse_genomes_project 4 157278514 157284549 - Necap2 protein_coding retained_intron MGP_NODShiLtJ_T0065929.1 MGP_NODShiLtJ_G0028239.1 mouse_genomes_project 4 99781066 99783224 - MGP_NODShiLtJ_P0065929 Ifnab protein_coding protein_coding MGP_NODShiLtJ_T0017881.1 MGP_NODShiLtJ_G0015401.1 mouse_genomes_project 4 9509756 9537486 + 1700123M08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017882.1 MGP_NODShiLtJ_G0015401.1 mouse_genomes_project 4 9509765 9537201 + 1700123M08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017883.1 MGP_NODShiLtJ_G0015401.1 mouse_genomes_project 4 9523380 9524878 + 1700123M08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0069461.1 MGP_NODShiLtJ_G0029026.1 mouse_genomes_project 4 173554967 173588708 + MGP_NODShiLtJ_P0069461 Ssu72 protein_coding protein_coding MGP_NODShiLtJ_T0069462.1 MGP_NODShiLtJ_G0029026.1 mouse_genomes_project 4 173555291 173570166 + Ssu72 protein_coding retained_intron MGP_NODShiLtJ_T0069463.1 MGP_NODShiLtJ_G0029026.1 mouse_genomes_project 4 173555302 173587025 + MGP_NODShiLtJ_P0069463 Ssu72 protein_coding protein_coding MGP_NODShiLtJ_T0066970.1 MGP_NODShiLtJ_G0028463.1 mouse_genomes_project 4 131740914 131754857 - MGP_NODShiLtJ_P0066970 B4galt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066977.1 MGP_NODShiLtJ_G0028463.1 mouse_genomes_project 4 131744730 131755205 - MGP_NODShiLtJ_P0066977 B4galt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066978.1 MGP_NODShiLtJ_G0028463.1 mouse_genomes_project 4 131744840 131755216 - MGP_NODShiLtJ_P0066978 B4galt2 protein_coding protein_coding MGP_NODShiLtJ_T0066979.1 MGP_NODShiLtJ_G0028463.1 mouse_genomes_project 4 131745011 131754814 - MGP_NODShiLtJ_P0066979 B4galt2 protein_coding protein_coding MGP_NODShiLtJ_T0066981.1 MGP_NODShiLtJ_G0028463.1 mouse_genomes_project 4 131749273 131754857 - MGP_NODShiLtJ_P0066981 B4galt2 protein_coding protein_coding MGP_NODShiLtJ_T0066982.1 MGP_NODShiLtJ_G0028463.1 mouse_genomes_project 4 131752720 131754948 - B4galt2 protein_coding processed_transcript MGP_NODShiLtJ_T0066983.1 MGP_NODShiLtJ_G0028463.1 mouse_genomes_project 4 131753094 131753993 - MGP_NODShiLtJ_P0066983 B4galt2 protein_coding protein_coding MGP_NODShiLtJ_T0014694.1 MGP_NODShiLtJ_G0012802.1 mouse_genomes_project 4 160181091 160181652 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068395.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153446084 153501823 + Rap1gap protein_coding processed_transcript MGP_NODShiLtJ_T0068396.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153446112 153497090 + Rap1gap protein_coding retained_intron MGP_NODShiLtJ_T0068397.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153465814 153505479 + MGP_NODShiLtJ_P0068397 Rap1gap protein_coding protein_coding MGP_NODShiLtJ_T0068398.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153465814 153517384 + MGP_NODShiLtJ_P0068398 Rap1gap protein_coding protein_coding MGP_NODShiLtJ_T0068399.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153465814 153501043 + MGP_NODShiLtJ_P0068399 Rap1gap protein_coding protein_coding MGP_NODShiLtJ_T0068400.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153466728 153517383 + MGP_NODShiLtJ_P0068400 Rap1gap protein_coding protein_coding MGP_NODShiLtJ_T0068401.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153472475 153501074 + Rap1gap protein_coding processed_transcript MGP_NODShiLtJ_T0068402.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153492769 153517384 + MGP_NODShiLtJ_P0068402 Rap1gap protein_coding protein_coding MGP_NODShiLtJ_T0068403.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153506394 153515881 + MGP_NODShiLtJ_P0068403 Rap1gap protein_coding protein_coding MGP_NODShiLtJ_T0068404.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153511511 153517384 + Rap1gap protein_coding retained_intron MGP_NODShiLtJ_T0068405.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153512851 153514580 + Rap1gap protein_coding retained_intron MGP_NODShiLtJ_T0068406.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153515284 153516459 + Rap1gap protein_coding retained_intron MGP_NODShiLtJ_T0068407.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153515703 153516342 + Rap1gap protein_coding retained_intron MGP_NODShiLtJ_T0068408.1 MGP_NODShiLtJ_G0028790.1 mouse_genomes_project 4 153515733 153517225 + Rap1gap protein_coding retained_intron MGP_NODShiLtJ_T0014334.1 MGP_NODShiLtJ_G0012442.1 mouse_genomes_project 4 25563363 25564191 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004517.1 MGP_NODShiLtJ_G0003920.1 mouse_genomes_project 4 158184438 158198836 + Fhad1os2 antisense antisense MGP_NODShiLtJ_T0010520.1 MGP_NODShiLtJ_G0008653.1 mouse_genomes_project 4 144341288 144341370 - Gm22994 miRNA miRNA MGP_NODShiLtJ_T0067515.1 MGP_NODShiLtJ_G0028597.1 mouse_genomes_project 4 142016895 142022815 + MGP_NODShiLtJ_P0067515 Tmem35b protein_coding protein_coding MGP_NODShiLtJ_T0067516.1 MGP_NODShiLtJ_G0028597.1 mouse_genomes_project 4 142019233 142022815 + MGP_NODShiLtJ_P0067516 Tmem35b protein_coding protein_coding MGP_NODShiLtJ_T0007790.1 MGP_NODShiLtJ_G0006363.1 mouse_genomes_project 4 62065777 62070788 - 2310081O03Rik lincRNA lincRNA MGP_NODShiLtJ_T0014396.1 MGP_NODShiLtJ_G0012504.1 mouse_genomes_project 4 45337336 45337564 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068862.1 MGP_NODShiLtJ_G0028923.1 mouse_genomes_project 4 165269674 165276077 - MGP_NODShiLtJ_P0068862 Fbxo6 protein_coding protein_coding MGP_NODShiLtJ_T0068863.1 MGP_NODShiLtJ_G0028923.1 mouse_genomes_project 4 165269674 165275852 - MGP_NODShiLtJ_P0068863 Fbxo6 protein_coding protein_coding MGP_NODShiLtJ_T0068864.1 MGP_NODShiLtJ_G0028923.1 mouse_genomes_project 4 165269745 165275857 - MGP_NODShiLtJ_P0068864 Fbxo6 protein_coding protein_coding MGP_NODShiLtJ_T0068865.1 MGP_NODShiLtJ_G0028923.1 mouse_genomes_project 4 165269746 165276001 - MGP_NODShiLtJ_P0068865 Fbxo6 protein_coding protein_coding MGP_NODShiLtJ_T0068866.1 MGP_NODShiLtJ_G0028923.1 mouse_genomes_project 4 165269967 165276082 - MGP_NODShiLtJ_P0068866 Fbxo6 protein_coding protein_coding MGP_NODShiLtJ_T0068867.1 MGP_NODShiLtJ_G0028923.1 mouse_genomes_project 4 165270050 165273680 - MGP_NODShiLtJ_P0068867 Fbxo6 protein_coding protein_coding MGP_NODShiLtJ_T0068868.1 MGP_NODShiLtJ_G0028923.1 mouse_genomes_project 4 165270076 165275869 - MGP_NODShiLtJ_P0068868 Fbxo6 protein_coding protein_coding MGP_NODShiLtJ_T0068869.1 MGP_NODShiLtJ_G0028923.1 mouse_genomes_project 4 165273404 165275590 - MGP_NODShiLtJ_P0068869 Fbxo6 protein_coding protein_coding MGP_NODShiLtJ_T0065582.1 MGP_NODShiLtJ_G0028161.1 mouse_genomes_project 4 68873405 68892405 - MGP_NODShiLtJ_P0065582 Wdr31 protein_coding protein_coding MGP_NODShiLtJ_T0065583.1 MGP_NODShiLtJ_G0028161.1 mouse_genomes_project 4 68874407 68892405 - MGP_NODShiLtJ_P0065583 Wdr31 protein_coding protein_coding MGP_NODShiLtJ_T0065584.1 MGP_NODShiLtJ_G0028161.1 mouse_genomes_project 4 68874407 68881949 - MGP_NODShiLtJ_P0065584 Wdr31 protein_coding protein_coding MGP_NODShiLtJ_T0065585.1 MGP_NODShiLtJ_G0028161.1 mouse_genomes_project 4 68874407 68892405 - MGP_NODShiLtJ_P0065585 Wdr31 protein_coding protein_coding MGP_NODShiLtJ_T0065586.1 MGP_NODShiLtJ_G0028161.1 mouse_genomes_project 4 68878314 68880047 - Wdr31 protein_coding retained_intron MGP_NODShiLtJ_T0065587.1 MGP_NODShiLtJ_G0028161.1 mouse_genomes_project 4 68879159 68882390 - Wdr31 protein_coding retained_intron MGP_NODShiLtJ_T0065588.1 MGP_NODShiLtJ_G0028161.1 mouse_genomes_project 4 68884884 68892414 - MGP_NODShiLtJ_P0065588 Wdr31 protein_coding protein_coding MGP_NODShiLtJ_T0065589.1 MGP_NODShiLtJ_G0028161.1 mouse_genomes_project 4 68885539 68892392 - MGP_NODShiLtJ_P0065589 Wdr31 protein_coding protein_coding MGP_NODShiLtJ_T0068948.1 MGP_NODShiLtJ_G0028937.1 mouse_genomes_project 4 166323733 166352698 + MGP_NODShiLtJ_P0068948 Dffa protein_coding protein_coding MGP_NODShiLtJ_T0068949.1 MGP_NODShiLtJ_G0028937.1 mouse_genomes_project 4 166323733 166350845 + MGP_NODShiLtJ_P0068949 Dffa protein_coding protein_coding MGP_NODShiLtJ_T0068950.1 MGP_NODShiLtJ_G0028937.1 mouse_genomes_project 4 166327313 166327779 + Dffa protein_coding processed_transcript MGP_NODShiLtJ_T0068479.1 MGP_NODShiLtJ_G0028806.1 mouse_genomes_project 4 154718174 154725268 - MGP_NODShiLtJ_P0068479 Pla2g2f protein_coding protein_coding MGP_NODShiLtJ_T0064613.1 MGP_NODShiLtJ_G0027929.1 mouse_genomes_project 4 35266274 35308808 + MGP_NODShiLtJ_P0064613 Rragd protein_coding protein_coding MGP_NODShiLtJ_T0064614.1 MGP_NODShiLtJ_G0027929.1 mouse_genomes_project 4 35266582 35305427 + MGP_NODShiLtJ_P0064614 Rragd protein_coding protein_coding MGP_NODShiLtJ_T0064615.1 MGP_NODShiLtJ_G0027929.1 mouse_genomes_project 4 35288148 35305447 + Rragd protein_coding processed_transcript MGP_NODShiLtJ_T0004514.1 MGP_NODShiLtJ_G0003918.1 mouse_genomes_project 4 157888797 157890375 + AI507597 antisense antisense MGP_NODShiLtJ_T0004515.1 MGP_NODShiLtJ_G0003918.1 mouse_genomes_project 4 157889125 157890375 + AI507597 antisense antisense MGP_NODShiLtJ_T0007957.1 MGP_NODShiLtJ_G0006489.1 mouse_genomes_project 4 167098878 167099566 - Gm13073 lincRNA lincRNA MGP_NODShiLtJ_T0014641.1 MGP_NODShiLtJ_G0012749.1 mouse_genomes_project 4 139388566 139389205 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014467.1 MGP_NODShiLtJ_G0012575.1 mouse_genomes_project 4 77530904 77531823 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100538.1 MGP_NODShiLtJ_G0038932.1 mouse_genomes_project 4 59553193 59553318 + Gm23745 snoRNA snoRNA MGP_NODShiLtJ_T0067496.1 MGP_NODShiLtJ_G0028594.1 mouse_genomes_project 4 141889892 141900445 + MGP_NODShiLtJ_P0067496 Sfpq protein_coding protein_coding MGP_NODShiLtJ_T0067497.1 MGP_NODShiLtJ_G0028594.1 mouse_genomes_project 4 141891951 141896526 + Sfpq protein_coding processed_transcript MGP_NODShiLtJ_T0067498.1 MGP_NODShiLtJ_G0028594.1 mouse_genomes_project 4 141892095 141906181 + Sfpq protein_coding processed_transcript MGP_NODShiLtJ_T0067499.1 MGP_NODShiLtJ_G0028594.1 mouse_genomes_project 4 141895133 141895824 + Sfpq protein_coding processed_transcript MGP_NODShiLtJ_T0067500.1 MGP_NODShiLtJ_G0028594.1 mouse_genomes_project 4 141895165 141897225 + Sfpq protein_coding processed_transcript MGP_NODShiLtJ_T0067501.1 MGP_NODShiLtJ_G0028594.1 mouse_genomes_project 4 141895654 141896759 + Sfpq protein_coding processed_transcript MGP_NODShiLtJ_T0067427.1 MGP_NODShiLtJ_G0028579.1 mouse_genomes_project 4 141020249 141033842 - MGP_NODShiLtJ_P0067427 Map7d1 protein_coding protein_coding MGP_NODShiLtJ_T0067428.1 MGP_NODShiLtJ_G0028579.1 mouse_genomes_project 4 141020249 141049950 - MGP_NODShiLtJ_P0067428 Map7d1 protein_coding protein_coding MGP_NODShiLtJ_T0067429.1 MGP_NODShiLtJ_G0028579.1 mouse_genomes_project 4 141020249 141049956 - MGP_NODShiLtJ_P0067429 Map7d1 protein_coding protein_coding MGP_NODShiLtJ_T0067430.1 MGP_NODShiLtJ_G0028579.1 mouse_genomes_project 4 141020249 141050016 - MGP_NODShiLtJ_P0067430 Map7d1 protein_coding protein_coding MGP_NODShiLtJ_T0067431.1 MGP_NODShiLtJ_G0028579.1 mouse_genomes_project 4 141021045 141021631 - Map7d1 protein_coding retained_intron MGP_NODShiLtJ_T0067432.1 MGP_NODShiLtJ_G0028579.1 mouse_genomes_project 4 141021702 141022859 - Map7d1 protein_coding retained_intron MGP_NODShiLtJ_T0064368.1 MGP_NODShiLtJ_G0027865.1 mouse_genomes_project 4 8733064 8798631 - MGP_NODShiLtJ_P0064368 Dpy19l4 protein_coding protein_coding MGP_NODShiLtJ_T0064369.1 MGP_NODShiLtJ_G0027865.1 mouse_genomes_project 4 8733065 8778969 - MGP_NODShiLtJ_P0064369 Dpy19l4 protein_coding protein_coding MGP_NODShiLtJ_T0064370.1 MGP_NODShiLtJ_G0027865.1 mouse_genomes_project 4 8749863 8798631 - MGP_NODShiLtJ_P0064370 Dpy19l4 protein_coding protein_coding MGP_NODShiLtJ_T0064371.1 MGP_NODShiLtJ_G0027865.1 mouse_genomes_project 4 8753948 8798569 - MGP_NODShiLtJ_P0064371 Dpy19l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064372.1 MGP_NODShiLtJ_G0027865.1 mouse_genomes_project 4 8778008 8798541 - Dpy19l4 protein_coding processed_transcript MGP_NODShiLtJ_T0064373.1 MGP_NODShiLtJ_G0027865.1 mouse_genomes_project 4 8792952 8798594 - Dpy19l4 protein_coding processed_transcript MGP_NODShiLtJ_T0014707.1 MGP_NODShiLtJ_G0012815.1 mouse_genomes_project 4 165134837 165138245 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099295.1 MGP_NODShiLtJ_G0037689.1 mouse_genomes_project 4 130824153 130824252 + Gm22335 snRNA snRNA MGP_NODShiLtJ_T0099326.1 MGP_NODShiLtJ_G0037720.1 mouse_genomes_project 4 167688078 167688188 + Gm23209 snRNA snRNA MGP_NODShiLtJ_T0069597.1 MGP_NODShiLtJ_G0029054.1 mouse_genomes_project 4 174117462 174124548 - MGP_NODShiLtJ_P0069597 Plekhn1 protein_coding protein_coding MGP_NODShiLtJ_T0069598.1 MGP_NODShiLtJ_G0029054.1 mouse_genomes_project 4 174117785 174124497 - MGP_NODShiLtJ_P0069598 Plekhn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0014530.1 MGP_NODShiLtJ_G0012638.1 mouse_genomes_project 4 104182915 104183213 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066630.1 MGP_NODShiLtJ_G0028387.1 mouse_genomes_project 4 126009206 126038865 - MGP_NODShiLtJ_P0066630 Slc5a9 protein_coding protein_coding MGP_NODShiLtJ_T0066631.1 MGP_NODShiLtJ_G0028387.1 mouse_genomes_project 4 126009260 126019517 - Slc5a9 protein_coding processed_transcript MGP_NODShiLtJ_T0066632.1 MGP_NODShiLtJ_G0028387.1 mouse_genomes_project 4 126010104 126034157 - MGP_NODShiLtJ_P0066632 Slc5a9 protein_coding protein_coding MGP_NODShiLtJ_T0066633.1 MGP_NODShiLtJ_G0028387.1 mouse_genomes_project 4 126011076 126038701 - MGP_NODShiLtJ_P0066633 Slc5a9 protein_coding protein_coding MGP_NODShiLtJ_T0066634.1 MGP_NODShiLtJ_G0028387.1 mouse_genomes_project 4 126011321 126014470 - Slc5a9 protein_coding processed_transcript MGP_NODShiLtJ_T0066635.1 MGP_NODShiLtJ_G0028387.1 mouse_genomes_project 4 126025266 126031456 - MGP_NODShiLtJ_P0066635 Slc5a9 protein_coding protein_coding MGP_NODShiLtJ_T0066636.1 MGP_NODShiLtJ_G0028387.1 mouse_genomes_project 4 126025595 126027095 - Slc5a9 protein_coding processed_transcript MGP_NODShiLtJ_T0066637.1 MGP_NODShiLtJ_G0028387.1 mouse_genomes_project 4 126025634 126026360 - Slc5a9 protein_coding processed_transcript MGP_NODShiLtJ_T0014569.1 MGP_NODShiLtJ_G0012677.1 mouse_genomes_project 4 118927074 118927675 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067473.1 MGP_NODShiLtJ_G0028591.1 mouse_genomes_project 4 141584176 141596761 - MGP_NODShiLtJ_P0067473 Ncdn protein_coding protein_coding MGP_NODShiLtJ_T0067474.1 MGP_NODShiLtJ_G0028591.1 mouse_genomes_project 4 141585157 141596790 - Ncdn protein_coding processed_transcript MGP_NODShiLtJ_T0067475.1 MGP_NODShiLtJ_G0028591.1 mouse_genomes_project 4 141585157 141596779 - MGP_NODShiLtJ_P0067475 Ncdn protein_coding protein_coding MGP_NODShiLtJ_T0068975.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166603418 166713524 - MGP_NODShiLtJ_P0068975 Ube4b protein_coding protein_coding MGP_NODShiLtJ_T0068976.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166603424 166610123 - MGP_NODShiLtJ_P0068976 Ube4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068977.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166604498 166606837 - Ube4b protein_coding processed_transcript MGP_NODShiLtJ_T0068978.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166604675 166712680 - MGP_NODShiLtJ_P0068978 Ube4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068979.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166604675 166712680 - MGP_NODShiLtJ_P0068979 Ube4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068980.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166610210 166611117 - Ube4b protein_coding processed_transcript MGP_NODShiLtJ_T0068981.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166627959 166628940 - Ube4b protein_coding retained_intron MGP_NODShiLtJ_T0068982.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166643289 166713406 - Ube4b protein_coding retained_intron MGP_NODShiLtJ_T0068983.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166662930 166713375 - Ube4b protein_coding processed_transcript MGP_NODShiLtJ_T0068984.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166664914 166665504 - Ube4b protein_coding processed_transcript MGP_NODShiLtJ_T0068985.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166676458 166712991 - Ube4b protein_coding retained_intron MGP_NODShiLtJ_T0068986.1 MGP_NODShiLtJ_G0028942.1 mouse_genomes_project 4 166676470 166677347 - Ube4b protein_coding processed_transcript MGP_NODShiLtJ_T0065685.1 MGP_NODShiLtJ_G0028188.1 mouse_genomes_project 4 73730861 73746211 + MGP_NODShiLtJ_P0065685 Tlr4 protein_coding protein_coding MGP_NODShiLtJ_T0065686.1 MGP_NODShiLtJ_G0028188.1 mouse_genomes_project 4 73730890 73837176 + MGP_NODShiLtJ_P0065686 Tlr4 protein_coding protein_coding MGP_NODShiLtJ_T0065687.1 MGP_NODShiLtJ_G0028188.1 mouse_genomes_project 4 73730896 73742707 + Tlr4 protein_coding processed_transcript MGP_NODShiLtJ_T0065688.1 MGP_NODShiLtJ_G0028188.1 mouse_genomes_project 4 73731479 73742896 + Tlr4 protein_coding processed_transcript MGP_NODShiLtJ_T0099314.1 MGP_NODShiLtJ_G0037708.1 mouse_genomes_project 4 149290341 149290441 - Gm22523 snRNA snRNA MGP_NODShiLtJ_T0066081.1 MGP_NODShiLtJ_G0028284.1 mouse_genomes_project 4 111778198 111790677 + MGP_NODShiLtJ_P0066081 protein_coding protein_coding MGP_NODShiLtJ_T0066082.1 MGP_NODShiLtJ_G0028284.1 mouse_genomes_project 4 111778267 111790677 + MGP_NODShiLtJ_P0066082 protein_coding protein_coding MGP_NODShiLtJ_T0066083.1 MGP_NODShiLtJ_G0028284.1 mouse_genomes_project 4 111778352 111782736 + MGP_NODShiLtJ_P0066083 protein_coding protein_coding MGP_NODShiLtJ_T0066084.1 MGP_NODShiLtJ_G0028284.1 mouse_genomes_project 4 111782562 111785347 + MGP_NODShiLtJ_P0066084 protein_coding protein_coding MGP_NODShiLtJ_T0065086.1 MGP_NODShiLtJ_G0028036.1 mouse_genomes_project 4 48300134 48330066 + MGP_NODShiLtJ_P0065086 Clta protein_coding protein_coding MGP_NODShiLtJ_T0065087.1 MGP_NODShiLtJ_G0028036.1 mouse_genomes_project 4 48308965 48330066 + MGP_NODShiLtJ_P0065087 Clta protein_coding protein_coding MGP_NODShiLtJ_T0065088.1 MGP_NODShiLtJ_G0028036.1 mouse_genomes_project 4 48308970 48330065 + MGP_NODShiLtJ_P0065088 Clta protein_coding protein_coding MGP_NODShiLtJ_T0065089.1 MGP_NODShiLtJ_G0028036.1 mouse_genomes_project 4 48309005 48330066 + MGP_NODShiLtJ_P0065089 Clta protein_coding protein_coding MGP_NODShiLtJ_T0065090.1 MGP_NODShiLtJ_G0028036.1 mouse_genomes_project 4 48309005 48330066 + MGP_NODShiLtJ_P0065090 Clta protein_coding protein_coding MGP_NODShiLtJ_T0065091.1 MGP_NODShiLtJ_G0028036.1 mouse_genomes_project 4 48309013 48330066 + MGP_NODShiLtJ_P0065091 Clta protein_coding protein_coding MGP_NODShiLtJ_T0014683.1 MGP_NODShiLtJ_G0012791.1 mouse_genomes_project 4 152944186 152944868 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065119.1 MGP_NODShiLtJ_G0028039.1 mouse_genomes_project 4 48639004 48705334 + MGP_NODShiLtJ_P0065119 Melk protein_coding protein_coding MGP_NODShiLtJ_T0065120.1 MGP_NODShiLtJ_G0028039.1 mouse_genomes_project 4 48640785 48671950 + MGP_NODShiLtJ_P0065120 Melk protein_coding protein_coding MGP_NODShiLtJ_T0065121.1 MGP_NODShiLtJ_G0028039.1 mouse_genomes_project 4 48641689 48670525 + Melk protein_coding processed_transcript MGP_NODShiLtJ_T0065122.1 MGP_NODShiLtJ_G0028039.1 mouse_genomes_project 4 48641689 48664328 + MGP_NODShiLtJ_P0065122 Melk protein_coding protein_coding MGP_NODShiLtJ_T0014574.1 MGP_NODShiLtJ_G0012682.1 mouse_genomes_project 4 120743717 120744153 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068555.1 MGP_NODShiLtJ_G0028826.1 mouse_genomes_project 4 155689299 155707088 + MGP_NODShiLtJ_P0068555 Tas1r2 protein_coding protein_coding MGP_NODShiLtJ_T0068556.1 MGP_NODShiLtJ_G0028826.1 mouse_genomes_project 4 155689310 155706663 + MGP_NODShiLtJ_P0068556 Tas1r2 protein_coding protein_coding MGP_NODShiLtJ_T0017925.1 MGP_NODShiLtJ_G0015431.1 mouse_genomes_project 4 122184989 122214190 - Gm12743 processed_transcript processed_transcript MGP_NODShiLtJ_T0068417.1 MGP_NODShiLtJ_G0028792.1 mouse_genomes_project 4 153709630 153767916 + MGP_NODShiLtJ_P0068417 Ece1 protein_coding protein_coding MGP_NODShiLtJ_T0068418.1 MGP_NODShiLtJ_G0028792.1 mouse_genomes_project 4 153767532 153791157 + MGP_NODShiLtJ_P0068418 Ece1 protein_coding protein_coding MGP_NODShiLtJ_T0068419.1 MGP_NODShiLtJ_G0028792.1 mouse_genomes_project 4 153767743 153781067 + Ece1 protein_coding processed_transcript MGP_NODShiLtJ_T0068420.1 MGP_NODShiLtJ_G0028792.1 mouse_genomes_project 4 153767787 153822545 + MGP_NODShiLtJ_P0068420 Ece1 protein_coding protein_coding MGP_NODShiLtJ_T0069369.1 MGP_NODShiLtJ_G0029012.1 mouse_genomes_project 4 172886970 172954322 + MGP_NODShiLtJ_P0069369 Morn1 protein_coding protein_coding MGP_NODShiLtJ_T0069370.1 MGP_NODShiLtJ_G0029012.1 mouse_genomes_project 4 172886970 172914681 + MGP_NODShiLtJ_P0069370 Morn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069371.1 MGP_NODShiLtJ_G0029012.1 mouse_genomes_project 4 172886982 172894561 + MGP_NODShiLtJ_P0069371 Morn1 protein_coding protein_coding MGP_NODShiLtJ_T0069372.1 MGP_NODShiLtJ_G0029012.1 mouse_genomes_project 4 172886996 172894842 + MGP_NODShiLtJ_P0069372 Morn1 protein_coding protein_coding MGP_NODShiLtJ_T0069373.1 MGP_NODShiLtJ_G0029012.1 mouse_genomes_project 4 172887007 172947552 + Morn1 protein_coding processed_transcript MGP_NODShiLtJ_T0069374.1 MGP_NODShiLtJ_G0029012.1 mouse_genomes_project 4 172887021 172947530 + Morn1 protein_coding processed_transcript MGP_NODShiLtJ_T0069375.1 MGP_NODShiLtJ_G0029012.1 mouse_genomes_project 4 172903705 172934610 + Morn1 protein_coding retained_intron MGP_NODShiLtJ_T0069376.1 MGP_NODShiLtJ_G0029012.1 mouse_genomes_project 4 172913189 172934174 + Morn1 protein_coding retained_intron MGP_NODShiLtJ_T0069413.1 MGP_NODShiLtJ_G0029018.1 mouse_genomes_project 4 173307017 173308319 + Tmem52 protein_coding retained_intron MGP_NODShiLtJ_T0069414.1 MGP_NODShiLtJ_G0029018.1 mouse_genomes_project 4 173307017 173308762 + MGP_NODShiLtJ_P0069414 Tmem52 protein_coding protein_coding MGP_NODShiLtJ_T0069415.1 MGP_NODShiLtJ_G0029018.1 mouse_genomes_project 4 173307017 173308762 + MGP_NODShiLtJ_P0069415 Tmem52 protein_coding protein_coding MGP_NODShiLtJ_T0069416.1 MGP_NODShiLtJ_G0029018.1 mouse_genomes_project 4 173307034 173308761 + MGP_NODShiLtJ_P0069416 Tmem52 protein_coding protein_coding MGP_NODShiLtJ_T0069417.1 MGP_NODShiLtJ_G0029018.1 mouse_genomes_project 4 173307050 173308693 + Tmem52 protein_coding retained_intron MGP_NODShiLtJ_T0066231.1 MGP_NODShiLtJ_G0028313.1 mouse_genomes_project 4 116343256 116387547 - MGP_NODShiLtJ_P0066231 Slc35d1 protein_coding protein_coding MGP_NODShiLtJ_T0066232.1 MGP_NODShiLtJ_G0028313.1 mouse_genomes_project 4 116343263 116387186 - MGP_NODShiLtJ_P0066232 Slc35d1 protein_coding protein_coding MGP_NODShiLtJ_T0066233.1 MGP_NODShiLtJ_G0028313.1 mouse_genomes_project 4 116373766 116387186 - MGP_NODShiLtJ_P0066233 Slc35d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066234.1 MGP_NODShiLtJ_G0028313.1 mouse_genomes_project 4 116382714 116387182 - Slc35d1 protein_coding retained_intron MGP_NODShiLtJ_T0066235.1 MGP_NODShiLtJ_G0028313.1 mouse_genomes_project 4 116382935 116387055 - Slc35d1 protein_coding retained_intron MGP_NODShiLtJ_T0066833.1 MGP_NODShiLtJ_G0028437.1 mouse_genomes_project 4 130446583 130468771 + MGP_NODShiLtJ_P0066833 Prdx1 protein_coding protein_coding MGP_NODShiLtJ_T0066834.1 MGP_NODShiLtJ_G0028437.1 mouse_genomes_project 4 130446638 130448894 + Prdx1 protein_coding retained_intron MGP_NODShiLtJ_T0066835.1 MGP_NODShiLtJ_G0028437.1 mouse_genomes_project 4 130446638 130461561 + MGP_NODShiLtJ_P0066835 Prdx1 protein_coding protein_coding MGP_NODShiLtJ_T0066836.1 MGP_NODShiLtJ_G0028437.1 mouse_genomes_project 4 130446900 130460711 + MGP_NODShiLtJ_P0066836 Prdx1 protein_coding protein_coding MGP_NODShiLtJ_T0066837.1 MGP_NODShiLtJ_G0028437.1 mouse_genomes_project 4 130446926 130466946 + MGP_NODShiLtJ_P0066837 Prdx1 protein_coding protein_coding MGP_NODShiLtJ_T0066838.1 MGP_NODShiLtJ_G0028437.1 mouse_genomes_project 4 130448352 130466860 + MGP_NODShiLtJ_P0066838 Prdx1 protein_coding protein_coding MGP_NODShiLtJ_T0014533.1 MGP_NODShiLtJ_G0012641.1 mouse_genomes_project 4 105471967 105472843 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069307.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172096684 172428405 - Prdm16 protein_coding processed_transcript MGP_NODShiLtJ_T0069308.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172096684 172428405 - MGP_NODShiLtJ_P0069308 Prdm16 protein_coding protein_coding MGP_NODShiLtJ_T0069309.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172096684 172428405 - MGP_NODShiLtJ_P0069309 Prdm16 protein_coding protein_coding MGP_NODShiLtJ_T0069310.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172096684 172428405 - MGP_NODShiLtJ_P0069310 Prdm16 protein_coding protein_coding MGP_NODShiLtJ_T0069311.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172096684 172428405 - MGP_NODShiLtJ_P0069311 Prdm16 protein_coding protein_coding MGP_NODShiLtJ_T0069312.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172096684 172428405 - MGP_NODShiLtJ_P0069312 Prdm16 protein_coding protein_coding MGP_NODShiLtJ_T0069313.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172096684 172428405 - MGP_NODShiLtJ_P0069313 Prdm16 protein_coding protein_coding MGP_NODShiLtJ_T0069314.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172103879 172115490 - Prdm16 protein_coding processed_transcript MGP_NODShiLtJ_T0069315.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172108882 172115560 - Prdm16 protein_coding processed_transcript MGP_NODShiLtJ_T0069317.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172126758 172129077 - Prdm16 protein_coding processed_transcript MGP_NODShiLtJ_T0069318.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172137008 172428412 - MGP_NODShiLtJ_P0069318 Prdm16 protein_coding protein_coding MGP_NODShiLtJ_T0069319.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172260714 172315225 - Prdm16 protein_coding processed_transcript MGP_NODShiLtJ_T0069320.1 MGP_NODShiLtJ_G0029000.1 mouse_genomes_project 4 172260745 172428336 - Prdm16 protein_coding processed_transcript MGP_NODShiLtJ_T0069158.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169670614 169702989 - MGP_NODShiLtJ_P0069158 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069159.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169670619 169703153 - MGP_NODShiLtJ_P0069159 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069160.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671140 169679208 - MGP_NODShiLtJ_P0069160 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069161.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671151 169703004 - MGP_NODShiLtJ_P0069161 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069162.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671153 169682152 - MGP_NODShiLtJ_P0069162 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069163.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671165 169682624 - Espn protein_coding processed_transcript MGP_NODShiLtJ_T0069164.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671404 169686569 - MGP_NODShiLtJ_P0069164 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069165.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671404 169686569 - MGP_NODShiLtJ_P0069165 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069166.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671404 169686569 - MGP_NODShiLtJ_P0069166 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069167.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671404 169686612 - MGP_NODShiLtJ_P0069167 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069168.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671404 169686612 - MGP_NODShiLtJ_P0069168 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069169.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671404 169686612 - MGP_NODShiLtJ_P0069169 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069170.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671404 169686569 - MGP_NODShiLtJ_P0069170 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069171.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671404 169686612 - MGP_NODShiLtJ_P0069171 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069172.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169671415 169682128 - Espn protein_coding processed_transcript MGP_NODShiLtJ_T0069173.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169673182 169682153 - Espn protein_coding processed_transcript MGP_NODShiLtJ_T0069174.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169673997 169699830 - MGP_NODShiLtJ_P0069174 Espn protein_coding protein_coding MGP_NODShiLtJ_T0069175.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169678076 169682144 - Espn protein_coding processed_transcript MGP_NODShiLtJ_T0069176.1 MGP_NODShiLtJ_G0028977.1 mouse_genomes_project 4 169678424 169681517 - Espn protein_coding processed_transcript MGP_NODShiLtJ_T0065978.1 MGP_NODShiLtJ_G0028261.1 mouse_genomes_project 4 107200657 107344059 + MGP_NODShiLtJ_P0065978 Tek protein_coding protein_coding MGP_NODShiLtJ_T0065979.1 MGP_NODShiLtJ_G0028261.1 mouse_genomes_project 4 107200668 107344022 + MGP_NODShiLtJ_P0065979 Tek protein_coding protein_coding MGP_NODShiLtJ_T0065980.1 MGP_NODShiLtJ_G0028261.1 mouse_genomes_project 4 107200886 107343765 + MGP_NODShiLtJ_P0065980 Tek protein_coding protein_coding MGP_NODShiLtJ_T0065981.1 MGP_NODShiLtJ_G0028261.1 mouse_genomes_project 4 107269890 107280098 + Tek protein_coding processed_transcript MGP_NODShiLtJ_T0007966.1 MGP_NODShiLtJ_G0006498.1 mouse_genomes_project 4 172438947 172439566 - Gm27202 lincRNA lincRNA MGP_NODShiLtJ_T0014372.1 MGP_NODShiLtJ_G0012480.1 mouse_genomes_project 4 37481123 37489702 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010483.1 MGP_NODShiLtJ_G0008616.1 mouse_genomes_project 4 44746350 44746429 + Mir207 miRNA miRNA MGP_NODShiLtJ_T0064665.1 MGP_NODShiLtJ_G0027943.1 mouse_genomes_project 4 37194572 37244137 - MGP_NODShiLtJ_P0064665 Cfap206 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064666.1 MGP_NODShiLtJ_G0027943.1 mouse_genomes_project 4 37194749 37229889 - Cfap206 protein_coding processed_transcript MGP_NODShiLtJ_T0064667.1 MGP_NODShiLtJ_G0027943.1 mouse_genomes_project 4 37220891 37244115 - MGP_NODShiLtJ_P0064667 Cfap206 protein_coding protein_coding MGP_NODShiLtJ_T0064668.1 MGP_NODShiLtJ_G0027943.1 mouse_genomes_project 4 37231674 37244132 - MGP_NODShiLtJ_P0064668 Cfap206 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064669.1 MGP_NODShiLtJ_G0027943.1 mouse_genomes_project 4 37231705 37244132 - MGP_NODShiLtJ_P0064669 Cfap206 protein_coding protein_coding MGP_NODShiLtJ_T0064670.1 MGP_NODShiLtJ_G0027943.1 mouse_genomes_project 4 37233821 37244132 - Cfap206 protein_coding processed_transcript MGP_NODShiLtJ_T0017892.1 MGP_NODShiLtJ_G0015408.1 mouse_genomes_project 4 37458867 37465181 - Platr9 processed_transcript processed_transcript MGP_NODShiLtJ_T0017893.1 MGP_NODShiLtJ_G0015408.1 mouse_genomes_project 4 37462533 37465181 - Platr9 processed_transcript processed_transcript MGP_NODShiLtJ_T0007891.1 MGP_NODShiLtJ_G0006440.1 mouse_genomes_project 4 142471576 142499893 + A630031M04Rik lincRNA lincRNA MGP_NODShiLtJ_T0068749.1 MGP_NODShiLtJ_G0028875.1 mouse_genomes_project 4 159909642 159944642 - MGP_NODShiLtJ_P0068749 Oog4 protein_coding protein_coding MGP_NODShiLtJ_T0068750.1 MGP_NODShiLtJ_G0028875.1 mouse_genomes_project 4 159909643 159944622 - MGP_NODShiLtJ_P0068750 Oog4 protein_coding protein_coding MGP_NODShiLtJ_T0068190.1 MGP_NODShiLtJ_G0028740.1 mouse_genomes_project 4 150442211 150460452 - MGP_NODShiLtJ_P0068190 Tmem50a protein_coding protein_coding MGP_NODShiLtJ_T0068191.1 MGP_NODShiLtJ_G0028740.1 mouse_genomes_project 4 150442753 150460443 - MGP_NODShiLtJ_P0068191 Tmem50a protein_coding protein_coding MGP_NODShiLtJ_T0066102.1 MGP_NODShiLtJ_G0028286.1 mouse_genomes_project 4 111898289 111908219 + MGP_NODShiLtJ_P0066102 Angptl3 protein_coding protein_coding MGP_NODShiLtJ_T0066103.1 MGP_NODShiLtJ_G0028286.1 mouse_genomes_project 4 111900564 111908113 + Angptl3 protein_coding processed_transcript MGP_NODShiLtJ_T0066104.1 MGP_NODShiLtJ_G0028286.1 mouse_genomes_project 4 111900588 111916289 + Angptl3 protein_coding processed_transcript MGP_NODShiLtJ_T0068142.1 MGP_NODShiLtJ_G0028726.1 mouse_genomes_project 4 149809820 149825085 + MGP_NODShiLtJ_P0068142 Trim63 protein_coding protein_coding MGP_NODShiLtJ_T0068143.1 MGP_NODShiLtJ_G0028726.1 mouse_genomes_project 4 149809822 149825063 + MGP_NODShiLtJ_P0068143 Trim63 protein_coding protein_coding MGP_NODShiLtJ_T0068144.1 MGP_NODShiLtJ_G0028726.1 mouse_genomes_project 4 149809912 149812078 + Trim63 protein_coding retained_intron MGP_NODShiLtJ_T0068145.1 MGP_NODShiLtJ_G0028726.1 mouse_genomes_project 4 149814688 149825082 + Trim63 protein_coding processed_transcript MGP_NODShiLtJ_T0007961.1 MGP_NODShiLtJ_G0006493.1 mouse_genomes_project 4 168275223 168295288 + Gm13049 lincRNA lincRNA MGP_NODShiLtJ_T0066073.1 MGP_NODShiLtJ_G0028281.1 mouse_genomes_project 4 111542272 111550767 + MGP_NODShiLtJ_P0066073 L1td1 protein_coding protein_coding MGP_NODShiLtJ_T0066074.1 MGP_NODShiLtJ_G0028281.1 mouse_genomes_project 4 111542286 111555562 + MGP_NODShiLtJ_P0066074 L1td1 protein_coding protein_coding MGP_NODShiLtJ_T0066075.1 MGP_NODShiLtJ_G0028281.1 mouse_genomes_project 4 111542331 111550683 + MGP_NODShiLtJ_P0066075 L1td1 protein_coding protein_coding MGP_NODShiLtJ_T0066076.1 MGP_NODShiLtJ_G0028281.1 mouse_genomes_project 4 111550325 111555198 + MGP_NODShiLtJ_P0066076 L1td1 protein_coding protein_coding MGP_NODShiLtJ_T0064335.1 MGP_NODShiLtJ_G0027858.1 mouse_genomes_project 4 7118053 7137553 + MGP_NODShiLtJ_P0064335 Gdf6 protein_coding protein_coding MGP_NODShiLtJ_T0064402.1 MGP_NODShiLtJ_G0027873.1 mouse_genomes_project 4 9522773 9524482 - MGP_NODShiLtJ_P0064402 Gm10604 protein_coding protein_coding MGP_NODShiLtJ_T0014487.1 MGP_NODShiLtJ_G0012595.1 mouse_genomes_project 4 84695052 84695881 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004390.1 MGP_NODShiLtJ_G0003823.1 mouse_genomes_project 4 49349076 49352403 + Gm12493 antisense antisense MGP_NODShiLtJ_T0065431.1 MGP_NODShiLtJ_G0028118.1 mouse_genomes_project 4 62695256 62697537 + Fam206a protein_coding retained_intron MGP_NODShiLtJ_T0065432.1 MGP_NODShiLtJ_G0028118.1 mouse_genomes_project 4 62695260 62702513 + MGP_NODShiLtJ_P0065432 Fam206a protein_coding protein_coding MGP_NODShiLtJ_T0065433.1 MGP_NODShiLtJ_G0028118.1 mouse_genomes_project 4 62695263 62702513 + MGP_NODShiLtJ_P0065433 Fam206a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065434.1 MGP_NODShiLtJ_G0028118.1 mouse_genomes_project 4 62695529 62698859 + MGP_NODShiLtJ_P0065434 Fam206a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065842.1 MGP_NODShiLtJ_G0028217.1 mouse_genomes_project 4 95982093 96191092 + MGP_NODShiLtJ_P0065842 Sh3gl2 protein_coding protein_coding MGP_NODShiLtJ_T0065843.1 MGP_NODShiLtJ_G0028217.1 mouse_genomes_project 4 95982408 96180943 + MGP_NODShiLtJ_P0065843 Sh3gl2 protein_coding protein_coding MGP_NODShiLtJ_T0065844.1 MGP_NODShiLtJ_G0028217.1 mouse_genomes_project 4 95982436 96450226 + MGP_NODShiLtJ_P0065844 Sh3gl2 protein_coding protein_coding MGP_NODShiLtJ_T0065845.1 MGP_NODShiLtJ_G0028217.1 mouse_genomes_project 4 95982502 96169254 + MGP_NODShiLtJ_P0065845 Sh3gl2 protein_coding protein_coding MGP_NODShiLtJ_T0065846.1 MGP_NODShiLtJ_G0028217.1 mouse_genomes_project 4 96167903 96179167 + MGP_NODShiLtJ_P0065846 Sh3gl2 protein_coding protein_coding MGP_NODShiLtJ_T0007872.1 MGP_NODShiLtJ_G0006430.1 mouse_genomes_project 4 138470754 138488726 - lincRNA lincRNA MGP_NODShiLtJ_T0066275.1 MGP_NODShiLtJ_G0028329.1 mouse_genomes_project 4 120043412 120061079 + MGP_NODShiLtJ_P0066275 Ttc22 protein_coding protein_coding MGP_NODShiLtJ_T0066276.1 MGP_NODShiLtJ_G0028329.1 mouse_genomes_project 4 120056866 120058518 + Ttc22 protein_coding processed_transcript MGP_NODShiLtJ_T0017957.1 MGP_NODShiLtJ_G0015446.1 mouse_genomes_project 4 149451819 149453520 + Gm13061 processed_transcript processed_transcript MGP_NODShiLtJ_T0099259.1 MGP_NODShiLtJ_G0037653.1 mouse_genomes_project 4 45443914 45444018 - Gm26084 snRNA snRNA MGP_NODShiLtJ_T0004446.1 MGP_NODShiLtJ_G0003863.1 mouse_genomes_project 4 123068085 123068504 - Ttc39aos1 antisense antisense MGP_NODShiLtJ_T0004447.1 MGP_NODShiLtJ_G0003863.1 mouse_genomes_project 4 123068100 123070447 - Ttc39aos1 antisense antisense MGP_NODShiLtJ_T0007763.1 MGP_NODShiLtJ_G0006341.1 mouse_genomes_project 4 44487841 44530985 - 4933428C19Rik lincRNA lincRNA MGP_NODShiLtJ_T0010509.1 MGP_NODShiLtJ_G0008642.1 mouse_genomes_project 4 131419461 131419535 + Gm25559 miRNA miRNA MGP_NODShiLtJ_T0017961.1 MGP_NODShiLtJ_G0015450.1 mouse_genomes_project 4 172439618 172449155 - Gm13110 processed_transcript processed_transcript MGP_NODShiLtJ_T0011447.1 MGP_NODShiLtJ_G0009580.1 mouse_genomes_project 4 17724120 17724452 - Gm24419 misc_RNA misc_RNA MGP_NODShiLtJ_T0100518.1 MGP_NODShiLtJ_G0038912.1 mouse_genomes_project 4 12115174 12115301 + Gm24908 snoRNA snoRNA MGP_NODShiLtJ_T0014436.1 MGP_NODShiLtJ_G0012544.1 mouse_genomes_project 4 60862134 60862495 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066934.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131110924 131128898 - MGP_NODShiLtJ_P0066934 Rnf220 protein_coding protein_coding MGP_NODShiLtJ_T0066935.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131110932 131346895 - MGP_NODShiLtJ_P0066935 Rnf220 protein_coding protein_coding MGP_NODShiLtJ_T0066936.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131111396 131215265 - MGP_NODShiLtJ_P0066936 Rnf220 protein_coding protein_coding MGP_NODShiLtJ_T0066937.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131115988 131124945 - Rnf220 protein_coding processed_transcript MGP_NODShiLtJ_T0066938.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131116896 131129301 - MGP_NODShiLtJ_P0066938 Rnf220 protein_coding protein_coding MGP_NODShiLtJ_T0066939.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131124562 131128913 - Rnf220 protein_coding processed_transcript MGP_NODShiLtJ_T0066940.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131124849 131128582 - Rnf220 protein_coding processed_transcript MGP_NODShiLtJ_T0066941.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131125359 131139890 - Rnf220 protein_coding processed_transcript MGP_NODShiLtJ_T0066942.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131145915 131346792 - Rnf220 protein_coding processed_transcript MGP_NODShiLtJ_T0066943.1 MGP_NODShiLtJ_G0028456.1 mouse_genomes_project 4 131340097 131344876 - Rnf220 protein_coding processed_transcript MGP_NODShiLtJ_T0064711.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44193756 44198492 - Ddx58 protein_coding processed_transcript MGP_NODShiLtJ_T0064712.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44193760 44213107 - Ddx58 protein_coding processed_transcript MGP_NODShiLtJ_T0064713.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44194832 44233206 - MGP_NODShiLtJ_P0064713 Ddx58 protein_coding protein_coding MGP_NODShiLtJ_T0064714.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44198166 44198746 - Ddx58 protein_coding processed_transcript MGP_NODShiLtJ_T0064715.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44198721 44203944 - Ddx58 protein_coding processed_transcript MGP_NODShiLtJ_T0064716.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44198803 44233078 - MGP_NODShiLtJ_P0064716 Ddx58 protein_coding protein_coding MGP_NODShiLtJ_T0064717.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44215937 44233133 - Ddx58 protein_coding processed_transcript MGP_NODShiLtJ_T0064718.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44216382 44233100 - Ddx58 protein_coding processed_transcript MGP_NODShiLtJ_T0064719.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44220007 44221794 - Ddx58 protein_coding processed_transcript MGP_NODShiLtJ_T0064720.1 MGP_NODShiLtJ_G0027955.1 mouse_genomes_project 4 44220496 44233203 - Ddx58 protein_coding processed_transcript MGP_NODShiLtJ_T0014400.1 MGP_NODShiLtJ_G0012508.1 mouse_genomes_project 4 49491614 49491777 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065106.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48440777 48485209 - MGP_NODShiLtJ_P0065106 Rnf38 protein_coding protein_coding MGP_NODShiLtJ_T0065107.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48440780 48484927 - MGP_NODShiLtJ_P0065107 Rnf38 protein_coding protein_coding MGP_NODShiLtJ_T0065108.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48443987 48476561 - MGP_NODShiLtJ_P0065108 Rnf38 protein_coding protein_coding MGP_NODShiLtJ_T0065109.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48443991 48485249 - MGP_NODShiLtJ_P0065109 Rnf38 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065110.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48444073 48453505 - Rnf38 protein_coding processed_transcript MGP_NODShiLtJ_T0065111.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48444075 48453384 - Rnf38 protein_coding processed_transcript MGP_NODShiLtJ_T0065112.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48454980 48486840 - MGP_NODShiLtJ_P0065112 Rnf38 protein_coding protein_coding MGP_NODShiLtJ_T0065113.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48455034 48476672 - MGP_NODShiLtJ_P0065113 Rnf38 protein_coding protein_coding MGP_NODShiLtJ_T0065114.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48455078 48485606 - MGP_NODShiLtJ_P0065114 Rnf38 protein_coding protein_coding MGP_NODShiLtJ_T0065115.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48463617 48485136 - Rnf38 protein_coding processed_transcript MGP_NODShiLtJ_T0065116.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48463624 48548781 - Rnf38 protein_coding processed_transcript MGP_NODShiLtJ_T0065117.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48463653 48485523 - Rnf38 protein_coding processed_transcript MGP_NODShiLtJ_T0065118.1 MGP_NODShiLtJ_G0028038.1 mouse_genomes_project 4 48476590 48485093 - Rnf38 protein_coding processed_transcript MGP_NODShiLtJ_T0017952.1 MGP_NODShiLtJ_G0015445.1 mouse_genomes_project 4 147508615 147514257 - Snhg3 processed_transcript processed_transcript MGP_NODShiLtJ_T0017953.1 MGP_NODShiLtJ_G0015445.1 mouse_genomes_project 4 147512526 147514280 - Snhg3 processed_transcript processed_transcript MGP_NODShiLtJ_T0017954.1 MGP_NODShiLtJ_G0015445.1 mouse_genomes_project 4 147512527 147513527 - Snhg3 processed_transcript processed_transcript MGP_NODShiLtJ_T0017955.1 MGP_NODShiLtJ_G0015445.1 mouse_genomes_project 4 147512527 147514227 - Snhg3 processed_transcript processed_transcript MGP_NODShiLtJ_T0017956.1 MGP_NODShiLtJ_G0015445.1 mouse_genomes_project 4 147512597 147513930 - Snhg3 processed_transcript processed_transcript MGP_NODShiLtJ_T0101936.1 MGP_NODShiLtJ_G0040104.1 mouse_genomes_project 4 137193017 137207474 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0068958.1 MGP_NODShiLtJ_G0028940.1 mouse_genomes_project 4 166388338 166404991 - MGP_NODShiLtJ_P0068958 Pgd protein_coding protein_coding MGP_NODShiLtJ_T0068959.1 MGP_NODShiLtJ_G0028940.1 mouse_genomes_project 4 166393506 166398296 - Pgd protein_coding retained_intron MGP_NODShiLtJ_T0068960.1 MGP_NODShiLtJ_G0028940.1 mouse_genomes_project 4 166398223 166405055 - Pgd protein_coding retained_intron MGP_NODShiLtJ_T0068961.1 MGP_NODShiLtJ_G0028940.1 mouse_genomes_project 4 166398589 166399960 - Pgd protein_coding retained_intron MGP_NODShiLtJ_T0068962.1 MGP_NODShiLtJ_G0028940.1 mouse_genomes_project 4 166399689 166404944 - Pgd protein_coding retained_intron MGP_NODShiLtJ_T0067074.1 MGP_NODShiLtJ_G0028491.1 mouse_genomes_project 4 132911967 132912909 - MGP_NODShiLtJ_P0067074 protein_coding protein_coding MGP_NODShiLtJ_T0004462.1 MGP_NODShiLtJ_G0003876.1 mouse_genomes_project 4 132937245 132937891 - Gm12863 antisense antisense MGP_NODShiLtJ_T0014701.1 MGP_NODShiLtJ_G0012809.1 mouse_genomes_project 4 162233610 162235296 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014266.1 MGP_NODShiLtJ_G0012374.1 mouse_genomes_project 4 2508989 2509461 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099325.1 MGP_NODShiLtJ_G0037719.1 mouse_genomes_project 4 166804760 166804864 - Gm24381 snRNA snRNA MGP_NODShiLtJ_T0064441.1 MGP_NODShiLtJ_G0027885.1 mouse_genomes_project 4 13231430 13256643 + MGP_NODShiLtJ_P0064441 Tmem64 protein_coding protein_coding MGP_NODShiLtJ_T0064806.1 MGP_NODShiLtJ_G0027978.1 mouse_genomes_project 4 45625952 45678588 - MGP_NODShiLtJ_P0064806 Fam219a protein_coding protein_coding MGP_NODShiLtJ_T0064807.1 MGP_NODShiLtJ_G0027978.1 mouse_genomes_project 4 45625952 45678616 - MGP_NODShiLtJ_P0064807 Fam219a protein_coding protein_coding MGP_NODShiLtJ_T0064808.1 MGP_NODShiLtJ_G0027978.1 mouse_genomes_project 4 45625952 45678616 - MGP_NODShiLtJ_P0064808 Fam219a protein_coding protein_coding MGP_NODShiLtJ_T0064809.1 MGP_NODShiLtJ_G0027978.1 mouse_genomes_project 4 45629630 45634078 - Fam219a protein_coding processed_transcript MGP_NODShiLtJ_T0064810.1 MGP_NODShiLtJ_G0027978.1 mouse_genomes_project 4 45633423 45678617 - Fam219a protein_coding processed_transcript MGP_NODShiLtJ_T0065780.1 MGP_NODShiLtJ_G0028210.1 mouse_genomes_project 4 93491066 93656853 - MGP_NODShiLtJ_P0065780 Frem1 protein_coding protein_coding MGP_NODShiLtJ_T0065781.1 MGP_NODShiLtJ_G0028210.1 mouse_genomes_project 4 93491073 93624879 - MGP_NODShiLtJ_P0065781 Frem1 protein_coding protein_coding MGP_NODShiLtJ_T0065782.1 MGP_NODShiLtJ_G0028210.1 mouse_genomes_project 4 93491073 93657025 - MGP_NODShiLtJ_P0065782 Frem1 protein_coding protein_coding MGP_NODShiLtJ_T0065783.1 MGP_NODShiLtJ_G0028210.1 mouse_genomes_project 4 93493710 93508923 - Frem1 protein_coding processed_transcript MGP_NODShiLtJ_T0065784.1 MGP_NODShiLtJ_G0028210.1 mouse_genomes_project 4 93510121 93519280 - Frem1 protein_coding retained_intron MGP_NODShiLtJ_T0065785.1 MGP_NODShiLtJ_G0028210.1 mouse_genomes_project 4 93531073 93535845 - Frem1 protein_coding retained_intron MGP_NODShiLtJ_T0065786.1 MGP_NODShiLtJ_G0028210.1 mouse_genomes_project 4 93533390 93571851 - MGP_NODShiLtJ_P0065786 Frem1 protein_coding protein_coding MGP_NODShiLtJ_T0065787.1 MGP_NODShiLtJ_G0028210.1 mouse_genomes_project 4 93596131 93657025 - Frem1 protein_coding processed_transcript MGP_NODShiLtJ_T0064895.1 MGP_NODShiLtJ_G0028002.1 mouse_genomes_project 4 47240961 47248417 - MGP_NODShiLtJ_P0064895 Pigo protein_coding protein_coding MGP_NODShiLtJ_T0064896.1 MGP_NODShiLtJ_G0028002.1 mouse_genomes_project 4 47240961 47249156 - MGP_NODShiLtJ_P0064896 Pigo protein_coding protein_coding MGP_NODShiLtJ_T0064897.1 MGP_NODShiLtJ_G0028002.1 mouse_genomes_project 4 47240961 47249093 - MGP_NODShiLtJ_P0064897 Pigo protein_coding protein_coding MGP_NODShiLtJ_T0064898.1 MGP_NODShiLtJ_G0028002.1 mouse_genomes_project 4 47241239 47243053 - Pigo protein_coding processed_transcript MGP_NODShiLtJ_T0064899.1 MGP_NODShiLtJ_G0028002.1 mouse_genomes_project 4 47248039 47248804 - Pigo protein_coding processed_transcript MGP_NODShiLtJ_T0014677.1 MGP_NODShiLtJ_G0012785.1 mouse_genomes_project 4 151620672 151621037 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064557.1 MGP_NODShiLtJ_G0027918.1 mouse_genomes_project 4 25863367 26140168 - MGP_NODShiLtJ_P0064557 Fut9 protein_coding protein_coding MGP_NODShiLtJ_T0064558.1 MGP_NODShiLtJ_G0027918.1 mouse_genomes_project 4 25886212 26140266 - MGP_NODShiLtJ_P0064558 Fut9 protein_coding protein_coding MGP_NODShiLtJ_T0064559.1 MGP_NODShiLtJ_G0027918.1 mouse_genomes_project 4 26137724 26139877 - Fut9 protein_coding processed_transcript MGP_NODShiLtJ_T0064445.1 MGP_NODShiLtJ_G0027887.1 mouse_genomes_project 4 14000085 14028369 - MGP_NODShiLtJ_P0064445 Decr1 protein_coding protein_coding MGP_NODShiLtJ_T0064446.1 MGP_NODShiLtJ_G0027887.1 mouse_genomes_project 4 14015840 14028137 - Decr1 protein_coding processed_transcript MGP_NODShiLtJ_T0064447.1 MGP_NODShiLtJ_G0027887.1 mouse_genomes_project 4 14026552 14027351 - Decr1 protein_coding processed_transcript MGP_NODShiLtJ_T0066385.1 MGP_NODShiLtJ_G0028346.1 mouse_genomes_project 4 120852852 120906096 + MGP_NODShiLtJ_P0066385 Ndc1 protein_coding protein_coding MGP_NODShiLtJ_T0066386.1 MGP_NODShiLtJ_G0028346.1 mouse_genomes_project 4 120852948 120904083 + MGP_NODShiLtJ_P0066386 Ndc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066387.1 MGP_NODShiLtJ_G0028346.1 mouse_genomes_project 4 120852983 120906073 + MGP_NODShiLtJ_P0066387 Ndc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066388.1 MGP_NODShiLtJ_G0028346.1 mouse_genomes_project 4 120853120 120900900 + MGP_NODShiLtJ_P0066388 Ndc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066389.1 MGP_NODShiLtJ_G0028346.1 mouse_genomes_project 4 120869830 120876822 + Ndc1 protein_coding processed_transcript MGP_NODShiLtJ_T0066390.1 MGP_NODShiLtJ_G0028346.1 mouse_genomes_project 4 120870207 120880341 + Ndc1 protein_coding retained_intron MGP_NODShiLtJ_T0067962.1 MGP_NODShiLtJ_G0028688.1 mouse_genomes_project 4 148239868 148251638 + Fgr protein_coding processed_transcript MGP_NODShiLtJ_T0067963.1 MGP_NODShiLtJ_G0028688.1 mouse_genomes_project 4 148239875 148269188 + MGP_NODShiLtJ_P0067963 Fgr protein_coding protein_coding MGP_NODShiLtJ_T0067964.1 MGP_NODShiLtJ_G0028688.1 mouse_genomes_project 4 148242887 148268029 + Fgr protein_coding processed_transcript MGP_NODShiLtJ_T0014315.1 MGP_NODShiLtJ_G0012423.1 mouse_genomes_project 4 17359872 17361982 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099315.1 MGP_NODShiLtJ_G0037709.1 mouse_genomes_project 4 151170740 151170841 + Gm23106 snRNA snRNA MGP_NODShiLtJ_T0014292.1 MGP_NODShiLtJ_G0012400.1 mouse_genomes_project 4 12043465 12044311 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064455.1 MGP_NODShiLtJ_G0027890.1 mouse_genomes_project 4 14225574 14269502 - MGP_NODShiLtJ_P0064455 Ripk2 protein_coding protein_coding MGP_NODShiLtJ_T0064456.1 MGP_NODShiLtJ_G0027890.1 mouse_genomes_project 4 14225582 14269498 - MGP_NODShiLtJ_P0064456 Ripk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014551.1 MGP_NODShiLtJ_G0012659.1 mouse_genomes_project 4 112439583 112439998 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064478.1 MGP_NODShiLtJ_G0027902.1 mouse_genomes_project 4 19400678 20225421 - MGP_NODShiLtJ_P0064478 Nkain3 protein_coding protein_coding MGP_NODShiLtJ_T0064479.1 MGP_NODShiLtJ_G0027902.1 mouse_genomes_project 4 19546269 20225720 - MGP_NODShiLtJ_P0064479 Nkain3 protein_coding protein_coding MGP_NODShiLtJ_T0069506.1 MGP_NODShiLtJ_G0029036.1 mouse_genomes_project 4 173723341 173735256 + MGP_NODShiLtJ_P0069506 Dvl1 protein_coding protein_coding MGP_NODShiLtJ_T0069507.1 MGP_NODShiLtJ_G0029036.1 mouse_genomes_project 4 173723400 173734831 + MGP_NODShiLtJ_P0069507 Dvl1 protein_coding protein_coding MGP_NODShiLtJ_T0069508.1 MGP_NODShiLtJ_G0029036.1 mouse_genomes_project 4 173723405 173735255 + Dvl1 protein_coding retained_intron MGP_NODShiLtJ_T0069509.1 MGP_NODShiLtJ_G0029036.1 mouse_genomes_project 4 173723505 173735256 + Dvl1 protein_coding retained_intron MGP_NODShiLtJ_T0069510.1 MGP_NODShiLtJ_G0029036.1 mouse_genomes_project 4 173723525 173735256 + Dvl1 protein_coding retained_intron MGP_NODShiLtJ_T0069511.1 MGP_NODShiLtJ_G0029036.1 mouse_genomes_project 4 173723610 173735256 + Dvl1 protein_coding retained_intron MGP_NODShiLtJ_T0069512.1 MGP_NODShiLtJ_G0029036.1 mouse_genomes_project 4 173729363 173729905 + Dvl1 protein_coding processed_transcript MGP_NODShiLtJ_T0069513.1 MGP_NODShiLtJ_G0029036.1 mouse_genomes_project 4 173730524 173732185 + Dvl1 protein_coding retained_intron MGP_NODShiLtJ_T0068700.1 MGP_NODShiLtJ_G0028861.1 mouse_genomes_project 4 158036007 158053898 + MGP_NODShiLtJ_P0068700 Agmat protein_coding protein_coding MGP_NODShiLtJ_T0068462.1 MGP_NODShiLtJ_G0028801.1 mouse_genomes_project 4 154369485 154378582 + MGP_NODShiLtJ_P0068462 Mul1 protein_coding protein_coding MGP_NODShiLtJ_T0068463.1 MGP_NODShiLtJ_G0028801.1 mouse_genomes_project 4 154369491 154378579 + MGP_NODShiLtJ_P0068463 Mul1 protein_coding protein_coding MGP_NODShiLtJ_T0068464.1 MGP_NODShiLtJ_G0028801.1 mouse_genomes_project 4 154369537 154373826 + MGP_NODShiLtJ_P0068464 Mul1 protein_coding protein_coding MGP_NODShiLtJ_T0004490.1 MGP_NODShiLtJ_G0003898.1 mouse_genomes_project 4 147729692 147730607 + Gm12999 antisense antisense MGP_NODShiLtJ_T0014602.1 MGP_NODShiLtJ_G0012710.1 mouse_genomes_project 4 130736964 130737767 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014511.1 MGP_NODShiLtJ_G0012619.1 mouse_genomes_project 4 95658495 95659935 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064625.1 MGP_NODShiLtJ_G0027934.1 mouse_genomes_project 4 35529364 35555517 + MGP_NODShiLtJ_P0064625 Srsf12 protein_coding protein_coding MGP_NODShiLtJ_T0064626.1 MGP_NODShiLtJ_G0027934.1 mouse_genomes_project 4 35529679 35555527 + MGP_NODShiLtJ_P0064626 Srsf12 protein_coding protein_coding MGP_NODShiLtJ_T0001390.1 MGP_NODShiLtJ_G0001310.1 mouse_genomes_project 4 146994818 146999428 + TEC TEC MGP_NODShiLtJ_T0065247.1 MGP_NODShiLtJ_G0028063.1 mouse_genomes_project 4 50890038 50903011 - MGP_NODShiLtJ_P0065247 Trmo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065248.1 MGP_NODShiLtJ_G0028063.1 mouse_genomes_project 4 50890512 50903016 - MGP_NODShiLtJ_P0065248 Trmo protein_coding protein_coding MGP_NODShiLtJ_T0065249.1 MGP_NODShiLtJ_G0028063.1 mouse_genomes_project 4 50893393 50903030 - MGP_NODShiLtJ_P0065249 Trmo protein_coding protein_coding MGP_NODShiLtJ_T0014586.1 MGP_NODShiLtJ_G0012694.1 mouse_genomes_project 4 123462072 123462476 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066509.1 MGP_NODShiLtJ_G0028368.1 mouse_genomes_project 4 122428932 122449840 - MGP_NODShiLtJ_P0066509 Btf3l4 protein_coding protein_coding MGP_NODShiLtJ_T0066510.1 MGP_NODShiLtJ_G0028368.1 mouse_genomes_project 4 122431356 122449790 - MGP_NODShiLtJ_P0066510 Btf3l4 protein_coding protein_coding MGP_NODShiLtJ_T0066511.1 MGP_NODShiLtJ_G0028368.1 mouse_genomes_project 4 122431429 122449780 - MGP_NODShiLtJ_P0066511 Btf3l4 protein_coding protein_coding MGP_NODShiLtJ_T0066512.1 MGP_NODShiLtJ_G0028368.1 mouse_genomes_project 4 122431470 122448156 - MGP_NODShiLtJ_P0066512 Btf3l4 protein_coding protein_coding MGP_NODShiLtJ_T0066513.1 MGP_NODShiLtJ_G0028368.1 mouse_genomes_project 4 122433417 122441566 - Btf3l4 protein_coding processed_transcript MGP_NODShiLtJ_T0066514.1 MGP_NODShiLtJ_G0028368.1 mouse_genomes_project 4 122441073 122446777 - Btf3l4 protein_coding processed_transcript MGP_NODShiLtJ_T0065779.1 MGP_NODShiLtJ_G0028209.1 mouse_genomes_project 4 93472579 93475977 - MGP_NODShiLtJ_P0065779 Cer1 protein_coding protein_coding MGP_NODShiLtJ_T0004456.1 MGP_NODShiLtJ_G0003871.1 mouse_genomes_project 4 131135686 131137595 + Gm12843 antisense antisense MGP_NODShiLtJ_T0004457.1 MGP_NODShiLtJ_G0003871.1 mouse_genomes_project 4 131136013 131137243 + Gm12843 antisense antisense MGP_NODShiLtJ_T0066677.1 MGP_NODShiLtJ_G0028401.1 mouse_genomes_project 4 128597252 128602449 + MGP_NODShiLtJ_P0066677 Pdzk1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0066678.1 MGP_NODShiLtJ_G0028401.1 mouse_genomes_project 4 128597252 128602449 + MGP_NODShiLtJ_P0066678 Pdzk1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0066679.1 MGP_NODShiLtJ_G0028401.1 mouse_genomes_project 4 128597267 128602454 + MGP_NODShiLtJ_P0066679 Pdzk1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0066680.1 MGP_NODShiLtJ_G0028401.1 mouse_genomes_project 4 128597267 128602454 + MGP_NODShiLtJ_P0066680 Pdzk1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0066681.1 MGP_NODShiLtJ_G0028401.1 mouse_genomes_project 4 128597587 128599897 + Pdzk1ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0066682.1 MGP_NODShiLtJ_G0028401.1 mouse_genomes_project 4 128598737 128602419 + Pdzk1ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0066683.1 MGP_NODShiLtJ_G0028401.1 mouse_genomes_project 4 128598804 128599782 + Pdzk1ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0066684.1 MGP_NODShiLtJ_G0028401.1 mouse_genomes_project 4 128599482 128602419 + Pdzk1ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0014620.1 MGP_NODShiLtJ_G0012728.1 mouse_genomes_project 4 133619760 133620163 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065168.1 MGP_NODShiLtJ_G0028045.1 mouse_genomes_project 4 49419835 49469864 - MGP_NODShiLtJ_P0065168 Fbxo10 protein_coding protein_coding MGP_NODShiLtJ_T0065169.1 MGP_NODShiLtJ_G0028045.1 mouse_genomes_project 4 49419836 49447770 - MGP_NODShiLtJ_P0065169 Fbxo10 protein_coding protein_coding MGP_NODShiLtJ_T0065170.1 MGP_NODShiLtJ_G0028045.1 mouse_genomes_project 4 49432053 49444384 - Fbxo10 protein_coding processed_transcript MGP_NODShiLtJ_T0014595.1 MGP_NODShiLtJ_G0012703.1 mouse_genomes_project 4 129062394 129062719 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068665.1 MGP_NODShiLtJ_G0028854.1 mouse_genomes_project 4 157727997 157804640 - MGP_NODShiLtJ_P0068665 Spen protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068666.1 MGP_NODShiLtJ_G0028854.1 mouse_genomes_project 4 157728007 157804991 - MGP_NODShiLtJ_P0068666 Spen protein_coding protein_coding MGP_NODShiLtJ_T0068667.1 MGP_NODShiLtJ_G0028854.1 mouse_genomes_project 4 157728007 157804843 - MGP_NODShiLtJ_P0068667 Spen protein_coding protein_coding MGP_NODShiLtJ_T0068668.1 MGP_NODShiLtJ_G0028854.1 mouse_genomes_project 4 157728587 157731620 - Spen protein_coding processed_transcript MGP_NODShiLtJ_T0068669.1 MGP_NODShiLtJ_G0028854.1 mouse_genomes_project 4 157744698 157748412 - Spen protein_coding processed_transcript MGP_NODShiLtJ_T0068670.1 MGP_NODShiLtJ_G0028854.1 mouse_genomes_project 4 157759067 157782911 - Spen protein_coding processed_transcript MGP_NODShiLtJ_T0068671.1 MGP_NODShiLtJ_G0028854.1 mouse_genomes_project 4 157788212 157804647 - Spen protein_coding processed_transcript MGP_NODShiLtJ_T0014267.1 MGP_NODShiLtJ_G0012375.1 mouse_genomes_project 4 2771508 2772480 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068495.1 MGP_NODShiLtJ_G0028811.1 mouse_genomes_project 4 154872930 154891481 - MGP_NODShiLtJ_P0068495 Otud3 protein_coding protein_coding MGP_NODShiLtJ_T0069552.1 MGP_NODShiLtJ_G0029043.1 mouse_genomes_project 4 173840733 173845029 + MGP_NODShiLtJ_P0069552 Fam132a protein_coding protein_coding MGP_NODShiLtJ_T0069553.1 MGP_NODShiLtJ_G0029043.1 mouse_genomes_project 4 173842972 173843594 + Fam132a protein_coding processed_transcript MGP_NODShiLtJ_T0069554.1 MGP_NODShiLtJ_G0029043.1 mouse_genomes_project 4 173843508 173845021 + Fam132a protein_coding processed_transcript MGP_NODShiLtJ_T0007828.1 MGP_NODShiLtJ_G0006395.1 mouse_genomes_project 4 105720524 105986070 - Gm12649 lincRNA lincRNA MGP_NODShiLtJ_T0014686.1 MGP_NODShiLtJ_G0012794.1 mouse_genomes_project 4 155132613 155133222 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099248.1 MGP_NODShiLtJ_G0037642.1 mouse_genomes_project 4 28846769 28846866 + Gm25173 snRNA snRNA MGP_NODShiLtJ_T0068245.1 MGP_NODShiLtJ_G0028749.1 mouse_genomes_project 4 151073663 151098310 + Stpg1 protein_coding processed_transcript MGP_NODShiLtJ_T0068246.1 MGP_NODShiLtJ_G0028749.1 mouse_genomes_project 4 151074850 151114078 + Stpg1 protein_coding processed_transcript MGP_NODShiLtJ_T0068247.1 MGP_NODShiLtJ_G0028749.1 mouse_genomes_project 4 151074860 151117895 + MGP_NODShiLtJ_P0068247 Stpg1 protein_coding protein_coding MGP_NODShiLtJ_T0014682.1 MGP_NODShiLtJ_G0012790.1 mouse_genomes_project 4 152941365 152941968 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066264.1 MGP_NODShiLtJ_G0028324.1 mouse_genomes_project 4 119721211 119849063 + MGP_NODShiLtJ_P0066264 Usp24 protein_coding protein_coding MGP_NODShiLtJ_T0066265.1 MGP_NODShiLtJ_G0028324.1 mouse_genomes_project 4 119721218 119770044 + Usp24 protein_coding retained_intron MGP_NODShiLtJ_T0066266.1 MGP_NODShiLtJ_G0028324.1 mouse_genomes_project 4 119721232 119849068 + MGP_NODShiLtJ_P0066266 Usp24 protein_coding protein_coding MGP_NODShiLtJ_T0066267.1 MGP_NODShiLtJ_G0028324.1 mouse_genomes_project 4 119836241 119838601 + Usp24 protein_coding processed_transcript MGP_NODShiLtJ_T0069076.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168365938 168386102 - MGP_NODShiLtJ_P0069076 Park7 protein_coding protein_coding MGP_NODShiLtJ_T0069077.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168365938 168381598 - MGP_NODShiLtJ_P0069077 Park7 protein_coding protein_coding MGP_NODShiLtJ_T0069078.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168365950 168381298 - MGP_NODShiLtJ_P0069078 Park7 protein_coding protein_coding MGP_NODShiLtJ_T0069079.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168366041 168380079 - MGP_NODShiLtJ_P0069079 Park7 protein_coding protein_coding MGP_NODShiLtJ_T0069080.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168366044 168381323 - MGP_NODShiLtJ_P0069080 Park7 protein_coding protein_coding MGP_NODShiLtJ_T0069081.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168366189 168370671 - Park7 protein_coding processed_transcript MGP_NODShiLtJ_T0069082.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168369841 168381155 - MGP_NODShiLtJ_P0069082 Park7 protein_coding protein_coding MGP_NODShiLtJ_T0069083.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168372399 168381500 - Park7 protein_coding retained_intron MGP_NODShiLtJ_T0069084.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168376785 168381540 - MGP_NODShiLtJ_P0069084 Park7 protein_coding protein_coding MGP_NODShiLtJ_T0069085.1 MGP_NODShiLtJ_G0028961.1 mouse_genomes_project 4 168376909 168385871 - MGP_NODShiLtJ_P0069085 Park7 protein_coding protein_coding MGP_NODShiLtJ_T0001376.1 MGP_NODShiLtJ_G0001296.1 mouse_genomes_project 4 10233933 10319591 + TEC TEC MGP_NODShiLtJ_T0069322.1 MGP_NODShiLtJ_G0029003.1 mouse_genomes_project 4 172640493 172657084 + MGP_NODShiLtJ_P0069322 protein_coding protein_coding MGP_NODShiLtJ_T0069323.1 MGP_NODShiLtJ_G0029003.1 mouse_genomes_project 4 172651857 172652936 + protein_coding processed_transcript MGP_NODShiLtJ_T0068026.1 MGP_NODShiLtJ_G0028703.1 mouse_genomes_project 4 148907749 148918511 + MGP_NODShiLtJ_P0068026 Gpatch3 protein_coding protein_coding MGP_NODShiLtJ_T0068027.1 MGP_NODShiLtJ_G0028703.1 mouse_genomes_project 4 148912637 148915944 + Gpatch3 protein_coding processed_transcript MGP_NODShiLtJ_T0010533.1 MGP_NODShiLtJ_G0008666.1 mouse_genomes_project 4 150995022 150995101 - Mir700 miRNA miRNA MGP_NODShiLtJ_T0064437.1 MGP_NODShiLtJ_G0027883.1 mouse_genomes_project 4 12811324 12866898 + MGP_NODShiLtJ_P0064437 Tmem55a protein_coding protein_coding MGP_NODShiLtJ_T0007819.1 MGP_NODShiLtJ_G0006388.1 mouse_genomes_project 4 98261797 98264706 + Gm12600 lincRNA lincRNA MGP_NODShiLtJ_T0007745.1 MGP_NODShiLtJ_G0006324.1 mouse_genomes_project 4 11747538 11844641 - Gm11823 lincRNA lincRNA MGP_NODShiLtJ_T0068672.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157844604 157871943 - MGP_NODShiLtJ_P0068672 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068673.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157844604 157870243 - MGP_NODShiLtJ_P0068673 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068674.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157844604 157878071 - MGP_NODShiLtJ_P0068674 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068675.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157860302 157871854 - MGP_NODShiLtJ_P0068675 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068676.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157860324 157878115 - MGP_NODShiLtJ_P0068676 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068677.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157860324 157878056 - MGP_NODShiLtJ_P0068677 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068678.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157860347 157870536 - MGP_NODShiLtJ_P0068678 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068679.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157860991 157872051 - MGP_NODShiLtJ_P0068679 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068680.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157861054 157868488 - Fblim1 protein_coding processed_transcript MGP_NODShiLtJ_T0068681.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157861070 157871907 - MGP_NODShiLtJ_P0068681 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068682.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157861071 157870243 - MGP_NODShiLtJ_P0068682 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068683.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157861081 157870225 - MGP_NODShiLtJ_P0068683 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068684.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157867270 157878044 - MGP_NODShiLtJ_P0068684 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068685.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157867321 157878055 - MGP_NODShiLtJ_P0068685 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0068686.1 MGP_NODShiLtJ_G0028855.1 mouse_genomes_project 4 157867388 157878046 - MGP_NODShiLtJ_P0068686 Fblim1 protein_coding protein_coding MGP_NODShiLtJ_T0007826.1 MGP_NODShiLtJ_G0006393.1 mouse_genomes_project 4 103573485 103574584 - 4930577H14Rik lincRNA lincRNA MGP_NODShiLtJ_T0064547.1 MGP_NODShiLtJ_G0027914.1 mouse_genomes_project 4 25057213 25065439 + MGP_NODShiLtJ_P0064547 Ndufaf4 protein_coding protein_coding MGP_NODShiLtJ_T0064548.1 MGP_NODShiLtJ_G0027914.1 mouse_genomes_project 4 25057261 25063943 + Ndufaf4 protein_coding processed_transcript MGP_NODShiLtJ_T0064549.1 MGP_NODShiLtJ_G0027914.1 mouse_genomes_project 4 25057306 25063923 + MGP_NODShiLtJ_P0064549 Ndufaf4 protein_coding protein_coding MGP_NODShiLtJ_T0067752.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145166054 145224205 + MGP_NODShiLtJ_P0067752 Col16a1 protein_coding protein_coding MGP_NODShiLtJ_T0067753.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145166089 145167931 + MGP_NODShiLtJ_P0067753 Col16a1 protein_coding protein_coding MGP_NODShiLtJ_T0067754.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145166099 145217047 + Col16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0067755.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145166120 145224180 + MGP_NODShiLtJ_P0067755 Col16a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067756.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145166123 145201030 + Col16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0067757.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145166159 145170060 + MGP_NODShiLtJ_P0067757 Col16a1 protein_coding protein_coding MGP_NODShiLtJ_T0067758.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145166176 145224211 + MGP_NODShiLtJ_P0067758 Col16a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067759.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145173199 145176760 + MGP_NODShiLtJ_P0067759 Col16a1 protein_coding protein_coding MGP_NODShiLtJ_T0067760.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145173244 145174206 + Col16a1 protein_coding retained_intron MGP_NODShiLtJ_T0067761.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145174168 145224205 + MGP_NODShiLtJ_P0067761 Col16a1 protein_coding protein_coding MGP_NODShiLtJ_T0067762.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145186658 145202128 + Col16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0067763.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145197755 145200837 + Col16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0067764.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145199680 145201249 + Col16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0067765.1 MGP_NODShiLtJ_G0028646.1 mouse_genomes_project 4 145222531 145224204 + Col16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0065464.1 MGP_NODShiLtJ_G0028124.1 mouse_genomes_project 4 63519132 63670141 + MGP_NODShiLtJ_P0065464 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065466.1 MGP_NODShiLtJ_G0028124.1 mouse_genomes_project 4 63519576 63667000 + MGP_NODShiLtJ_P0065466 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065469.1 MGP_NODShiLtJ_G0028124.1 mouse_genomes_project 4 63592770 63666260 + protein_coding retained_intron MGP_NODShiLtJ_T0065042.1 MGP_NODShiLtJ_G0028020.1 mouse_genomes_project 4 47841837 47843116 - MGP_NODShiLtJ_P0065042 Msmp protein_coding protein_coding MGP_NODShiLtJ_T0014545.1 MGP_NODShiLtJ_G0012653.1 mouse_genomes_project 4 111056334 111056827 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007925.1 MGP_NODShiLtJ_G0006461.1 mouse_genomes_project 4 147512365 147513976 + Gm17300 lincRNA lincRNA MGP_NODShiLtJ_T0069324.1 MGP_NODShiLtJ_G0029004.1 mouse_genomes_project 4 172661205 172689348 + MGP_NODShiLtJ_P0069324 Mmel1 protein_coding protein_coding MGP_NODShiLtJ_T0069325.1 MGP_NODShiLtJ_G0029004.1 mouse_genomes_project 4 172661205 172689355 + MGP_NODShiLtJ_P0069325 Mmel1 protein_coding protein_coding MGP_NODShiLtJ_T0069326.1 MGP_NODShiLtJ_G0029004.1 mouse_genomes_project 4 172661256 172689355 + MGP_NODShiLtJ_P0069326 Mmel1 protein_coding protein_coding MGP_NODShiLtJ_T0069327.1 MGP_NODShiLtJ_G0029004.1 mouse_genomes_project 4 172663225 172689348 + MGP_NODShiLtJ_P0069327 Mmel1 protein_coding protein_coding MGP_NODShiLtJ_T0069328.1 MGP_NODShiLtJ_G0029004.1 mouse_genomes_project 4 172663259 172689348 + MGP_NODShiLtJ_P0069328 Mmel1 protein_coding protein_coding MGP_NODShiLtJ_T0069329.1 MGP_NODShiLtJ_G0029004.1 mouse_genomes_project 4 172673417 172679553 + MGP_NODShiLtJ_P0069329 Mmel1 protein_coding protein_coding MGP_NODShiLtJ_T0069330.1 MGP_NODShiLtJ_G0029004.1 mouse_genomes_project 4 172686651 172687782 + Mmel1 protein_coding retained_intron MGP_NODShiLtJ_T0066579.1 MGP_NODShiLtJ_G0028378.1 mouse_genomes_project 4 123117192 123146544 - MGP_NODShiLtJ_P0066579 Rnf11 protein_coding protein_coding MGP_NODShiLtJ_T0066580.1 MGP_NODShiLtJ_G0028378.1 mouse_genomes_project 4 123120882 123146851 - MGP_NODShiLtJ_P0066580 Rnf11 protein_coding protein_coding MGP_NODShiLtJ_T0066581.1 MGP_NODShiLtJ_G0028378.1 mouse_genomes_project 4 123122267 123154597 - MGP_NODShiLtJ_P0066581 Rnf11 protein_coding protein_coding MGP_NODShiLtJ_T0014632.1 MGP_NODShiLtJ_G0012740.1 mouse_genomes_project 4 137353131 137353371 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014451.1 MGP_NODShiLtJ_G0012559.1 mouse_genomes_project 4 65652403 65652671 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067236.1 MGP_NODShiLtJ_G0028532.1 mouse_genomes_project 4 137113555 137129302 + MGP_NODShiLtJ_P0067236 9530002B09Rik protein_coding protein_coding MGP_NODShiLtJ_T0065185.1 MGP_NODShiLtJ_G0028049.1 mouse_genomes_project 4 49734552 49738569 - MGP_NODShiLtJ_P0065185 Exosc3 protein_coding protein_coding MGP_NODShiLtJ_T0065186.1 MGP_NODShiLtJ_G0028049.1 mouse_genomes_project 4 49734733 49738276 - Exosc3 protein_coding processed_transcript MGP_NODShiLtJ_T0065187.1 MGP_NODShiLtJ_G0028049.1 mouse_genomes_project 4 49734893 49760531 - MGP_NODShiLtJ_P0065187 Exosc3 protein_coding protein_coding MGP_NODShiLtJ_T0065188.1 MGP_NODShiLtJ_G0028049.1 mouse_genomes_project 4 49735428 49738544 - Exosc3 protein_coding processed_transcript MGP_NODShiLtJ_T0014711.1 MGP_NODShiLtJ_G0012819.1 mouse_genomes_project 4 166316141 166316461 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014354.1 MGP_NODShiLtJ_G0012462.1 mouse_genomes_project 4 30768061 30768782 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014577.1 MGP_NODShiLtJ_G0012685.1 mouse_genomes_project 4 121252156 121252582 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014408.1 MGP_NODShiLtJ_G0012516.1 mouse_genomes_project 4 51606594 51606957 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007854.1 MGP_NODShiLtJ_G0006416.1 mouse_genomes_project 4 121174786 121258627 + 1700047F07Rik lincRNA lincRNA MGP_NODShiLtJ_T0007855.1 MGP_NODShiLtJ_G0006416.1 mouse_genomes_project 4 121174818 121193390 + 1700047F07Rik lincRNA lincRNA MGP_NODShiLtJ_T0007856.1 MGP_NODShiLtJ_G0006416.1 mouse_genomes_project 4 121191836 121204239 + 1700047F07Rik lincRNA lincRNA MGP_NODShiLtJ_T0007857.1 MGP_NODShiLtJ_G0006416.1 mouse_genomes_project 4 121191859 121193447 + 1700047F07Rik lincRNA lincRNA MGP_NODShiLtJ_T0065406.1 MGP_NODShiLtJ_G0028109.1 mouse_genomes_project 4 59407225 59418572 + MGP_NODShiLtJ_P0065406 Tal2 protein_coding protein_coding MGP_NODShiLtJ_T0004435.1 MGP_NODShiLtJ_G0003856.1 mouse_genomes_project 4 120004403 120007619 - Gm12744 antisense antisense MGP_NODShiLtJ_T0099312.1 MGP_NODShiLtJ_G0037706.1 mouse_genomes_project 4 148191170 148191277 - Gm24913 snRNA snRNA MGP_NODShiLtJ_T0014340.1 MGP_NODShiLtJ_G0012448.1 mouse_genomes_project 4 27019130 27019858 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014507.1 MGP_NODShiLtJ_G0012615.1 mouse_genomes_project 4 94134821 94135084 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099282.1 MGP_NODShiLtJ_G0037676.1 mouse_genomes_project 4 112822838 112822920 + Gm26425 snRNA snRNA MGP_NODShiLtJ_T0010484.1 MGP_NODShiLtJ_G0008617.1 mouse_genomes_project 4 45046122 45046186 + Mir3094 miRNA miRNA MGP_NODShiLtJ_T0014299.1 MGP_NODShiLtJ_G0012407.1 mouse_genomes_project 4 13800856 13801701 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099243.1 MGP_NODShiLtJ_G0037637.1 mouse_genomes_project 4 8753238 8753393 - Gm22940 snRNA snRNA MGP_NODShiLtJ_T0064938.1 MGP_NODShiLtJ_G0028006.1 mouse_genomes_project 4 47502294 47580049 + Atp8b5 protein_coding retained_intron MGP_NODShiLtJ_T0064939.1 MGP_NODShiLtJ_G0028006.1 mouse_genomes_project 4 47502305 47611227 + MGP_NODShiLtJ_P0064939 Atp8b5 protein_coding protein_coding MGP_NODShiLtJ_T0064940.1 MGP_NODShiLtJ_G0028006.1 mouse_genomes_project 4 47502320 47611229 + MGP_NODShiLtJ_P0064940 Atp8b5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064941.1 MGP_NODShiLtJ_G0028006.1 mouse_genomes_project 4 47502320 47557084 + MGP_NODShiLtJ_P0064941 Atp8b5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064942.1 MGP_NODShiLtJ_G0028006.1 mouse_genomes_project 4 47502326 47558794 + MGP_NODShiLtJ_P0064942 Atp8b5 protein_coding protein_coding MGP_NODShiLtJ_T0064419.1 MGP_NODShiLtJ_G0027878.1 mouse_genomes_project 4 10594319 10683419 + MGP_NODShiLtJ_P0064419 Triqk protein_coding protein_coding MGP_NODShiLtJ_T0064420.1 MGP_NODShiLtJ_G0027878.1 mouse_genomes_project 4 10594339 10686413 + MGP_NODShiLtJ_P0064420 Triqk protein_coding protein_coding MGP_NODShiLtJ_T0064421.1 MGP_NODShiLtJ_G0027878.1 mouse_genomes_project 4 10605579 10683616 + Triqk protein_coding processed_transcript MGP_NODShiLtJ_T0064259.1 MGP_NODShiLtJ_G0027845.1 mouse_genomes_project 4 862432 868637 - MGP_NODShiLtJ_P0064259 Penk protein_coding protein_coding MGP_NODShiLtJ_T0064260.1 MGP_NODShiLtJ_G0027845.1 mouse_genomes_project 4 862433 868979 - MGP_NODShiLtJ_P0064260 Penk protein_coding protein_coding MGP_NODShiLtJ_T0011452.1 MGP_NODShiLtJ_G0009585.1 mouse_genomes_project 4 48191556 48191633 + Gm27265 misc_RNA misc_RNA MGP_NODShiLtJ_T0066356.1 MGP_NODShiLtJ_G0028342.1 mouse_genomes_project 4 120702805 120726240 - MGP_NODShiLtJ_P0066356 Lrrc42 protein_coding protein_coding MGP_NODShiLtJ_T0066357.1 MGP_NODShiLtJ_G0028342.1 mouse_genomes_project 4 120702808 120714999 - Lrrc42 protein_coding retained_intron MGP_NODShiLtJ_T0066358.1 MGP_NODShiLtJ_G0028342.1 mouse_genomes_project 4 120703050 120705272 - Lrrc42 protein_coding retained_intron MGP_NODShiLtJ_T0066359.1 MGP_NODShiLtJ_G0028342.1 mouse_genomes_project 4 120703230 120711198 - MGP_NODShiLtJ_P0066359 Lrrc42 protein_coding protein_coding MGP_NODShiLtJ_T0066360.1 MGP_NODShiLtJ_G0028342.1 mouse_genomes_project 4 120718888 120724636 - MGP_NODShiLtJ_P0066360 Lrrc42 protein_coding protein_coding MGP_NODShiLtJ_T0014345.1 MGP_NODShiLtJ_G0012453.1 mouse_genomes_project 4 29231291 29231614 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007838.1 MGP_NODShiLtJ_G0006404.1 mouse_genomes_project 4 114277783 114278766 + Gm12801 lincRNA lincRNA MGP_NODShiLtJ_T0069562.1 MGP_NODShiLtJ_G0029046.1 mouse_genomes_project 4 173899271 173902041 + MGP_NODShiLtJ_P0069562 Tnfrsf4 protein_coding protein_coding MGP_NODShiLtJ_T0069563.1 MGP_NODShiLtJ_G0029046.1 mouse_genomes_project 4 173899284 173902028 + Tnfrsf4 protein_coding processed_transcript MGP_NODShiLtJ_T0069564.1 MGP_NODShiLtJ_G0029046.1 mouse_genomes_project 4 173899677 173900687 + Tnfrsf4 protein_coding processed_transcript MGP_NODShiLtJ_T0010501.1 MGP_NODShiLtJ_G0008634.1 mouse_genomes_project 4 102923433 102923513 - Mir6402 miRNA miRNA MGP_NODShiLtJ_T0011464.1 MGP_NODShiLtJ_G0009597.1 mouse_genomes_project 4 106841354 106841616 - Gm26410 misc_RNA misc_RNA MGP_NODShiLtJ_T0099305.1 MGP_NODShiLtJ_G0037699.1 mouse_genomes_project 4 142001156 142001262 - Gm25600 snRNA snRNA MGP_NODShiLtJ_T0014398.1 MGP_NODShiLtJ_G0012506.1 mouse_genomes_project 4 48658851 48660316 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065717.1 MGP_NODShiLtJ_G0028197.1 mouse_genomes_project 4 82390009 82643017 + MGP_NODShiLtJ_P0065717 Frmd3 protein_coding protein_coding MGP_NODShiLtJ_T0065718.1 MGP_NODShiLtJ_G0028197.1 mouse_genomes_project 4 82390011 82627999 + MGP_NODShiLtJ_P0065718 Frmd3 protein_coding protein_coding MGP_NODShiLtJ_T0065719.1 MGP_NODShiLtJ_G0028197.1 mouse_genomes_project 4 82591279 82626745 + Frmd3 protein_coding processed_transcript MGP_NODShiLtJ_T0068421.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153854179 154005111 + MGP_NODShiLtJ_P0068421 Eif4g3 protein_coding protein_coding MGP_NODShiLtJ_T0068422.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153854179 154017495 + MGP_NODShiLtJ_P0068422 Eif4g3 protein_coding protein_coding MGP_NODShiLtJ_T0068423.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153854179 153994286 + MGP_NODShiLtJ_P0068423 Eif4g3 protein_coding protein_coding MGP_NODShiLtJ_T0068424.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153854613 154102016 + MGP_NODShiLtJ_P0068424 Eif4g3 protein_coding protein_coding MGP_NODShiLtJ_T0068425.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153854613 154102016 + MGP_NODShiLtJ_P0068425 Eif4g3 protein_coding protein_coding MGP_NODShiLtJ_T0068426.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153854633 153855308 + Eif4g3 protein_coding processed_transcript MGP_NODShiLtJ_T0068427.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153854641 153930115 + Eif4g3 protein_coding processed_transcript MGP_NODShiLtJ_T0068428.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153855105 154099568 + MGP_NODShiLtJ_P0068428 Eif4g3 protein_coding protein_coding MGP_NODShiLtJ_T0068429.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 153868049 153992261 + MGP_NODShiLtJ_P0068429 Eif4g3 protein_coding protein_coding MGP_NODShiLtJ_T0068430.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 154041703 154103445 + MGP_NODShiLtJ_P0068430 Eif4g3 protein_coding protein_coding MGP_NODShiLtJ_T0068431.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 154070505 154103445 + Eif4g3 protein_coding processed_transcript MGP_NODShiLtJ_T0068432.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 154073136 154081034 + Eif4g3 protein_coding retained_intron MGP_NODShiLtJ_T0068433.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 154077066 154080814 + Eif4g3 protein_coding processed_transcript MGP_NODShiLtJ_T0068434.1 MGP_NODShiLtJ_G0028793.1 mouse_genomes_project 4 154094682 154096563 + Eif4g3 protein_coding processed_transcript MGP_NODShiLtJ_T0014457.1 MGP_NODShiLtJ_G0012565.1 mouse_genomes_project 4 71549557 71550770 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014369.1 MGP_NODShiLtJ_G0012477.1 mouse_genomes_project 4 36867977 36868430 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068091.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149555629 149582202 + MGP_NODShiLtJ_P0068091 Ubxn11 protein_coding protein_coding MGP_NODShiLtJ_T0068092.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149555634 149580610 + Ubxn11 protein_coding processed_transcript MGP_NODShiLtJ_T0068093.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149555667 149581219 + Ubxn11 protein_coding processed_transcript MGP_NODShiLtJ_T0068094.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149555679 149582220 + Ubxn11 protein_coding processed_transcript MGP_NODShiLtJ_T0068095.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149555682 149571598 + MGP_NODShiLtJ_P0068095 Ubxn11 protein_coding protein_coding MGP_NODShiLtJ_T0068096.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149555683 149564488 + Ubxn11 protein_coding processed_transcript MGP_NODShiLtJ_T0068097.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149562642 149568443 + Ubxn11 protein_coding processed_transcript MGP_NODShiLtJ_T0068098.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149568023 149579043 + Ubxn11 protein_coding processed_transcript MGP_NODShiLtJ_T0068099.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149578913 149582219 + Ubxn11 protein_coding processed_transcript MGP_NODShiLtJ_T0068100.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149579495 149581945 + MGP_NODShiLtJ_P0068100 Ubxn11 protein_coding protein_coding MGP_NODShiLtJ_T0068101.1 MGP_NODShiLtJ_G0028715.1 mouse_genomes_project 4 149581371 149582220 + Ubxn11 protein_coding processed_transcript MGP_NODShiLtJ_T0007811.1 MGP_NODShiLtJ_G0006382.1 mouse_genomes_project 4 92583366 92622085 + Gm5860 lincRNA lincRNA MGP_NODShiLtJ_T0007812.1 MGP_NODShiLtJ_G0006382.1 mouse_genomes_project 4 92583808 92585671 + Gm5860 lincRNA lincRNA MGP_NODShiLtJ_T0007813.1 MGP_NODShiLtJ_G0006382.1 mouse_genomes_project 4 92583892 92621746 + Gm5860 lincRNA lincRNA MGP_NODShiLtJ_T0066841.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130477867 130479078 + MGP_NODShiLtJ_P0066841 Ccdc163 protein_coding protein_coding MGP_NODShiLtJ_T0066842.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130477878 130479555 + MGP_NODShiLtJ_P0066842 Ccdc163 protein_coding protein_coding MGP_NODShiLtJ_T0066843.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130477884 130479033 + Ccdc163 protein_coding processed_transcript MGP_NODShiLtJ_T0066844.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130477893 130479777 + Ccdc163 protein_coding retained_intron MGP_NODShiLtJ_T0066845.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130477973 130478781 + MGP_NODShiLtJ_P0066845 Ccdc163 protein_coding protein_coding MGP_NODShiLtJ_T0066846.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130478198 130489242 + MGP_NODShiLtJ_P0066846 Ccdc163 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066847.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130478286 130489245 + MGP_NODShiLtJ_P0066847 Ccdc163 protein_coding protein_coding MGP_NODShiLtJ_T0066848.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130481812 130518228 + Ccdc163 protein_coding processed_transcript MGP_NODShiLtJ_T0066849.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130482110 130527432 + Ccdc163 protein_coding processed_transcript MGP_NODShiLtJ_T0066850.1 MGP_NODShiLtJ_G0028439.1 mouse_genomes_project 4 130482177 130489237 + MGP_NODShiLtJ_P0066850 Ccdc163 protein_coding protein_coding MGP_NODShiLtJ_T0067990.1 MGP_NODShiLtJ_G0028693.1 mouse_genomes_project 4 148527911 148539978 + MGP_NODShiLtJ_P0067990 Map3k6 protein_coding protein_coding MGP_NODShiLtJ_T0067991.1 MGP_NODShiLtJ_G0028693.1 mouse_genomes_project 4 148534277 148535133 + Map3k6 protein_coding processed_transcript MGP_NODShiLtJ_T0067992.1 MGP_NODShiLtJ_G0028693.1 mouse_genomes_project 4 148534353 148535161 + Map3k6 protein_coding processed_transcript MGP_NODShiLtJ_T0067993.1 MGP_NODShiLtJ_G0028693.1 mouse_genomes_project 4 148537896 148539977 + Map3k6 protein_coding processed_transcript MGP_NODShiLtJ_T0069594.1 MGP_NODShiLtJ_G0029051.1 mouse_genomes_project 4 174086981 174088935 - MGP_NODShiLtJ_P0069594 Isg15 protein_coding protein_coding MGP_NODShiLtJ_T0007911.1 MGP_NODShiLtJ_G0006454.1 mouse_genomes_project 4 146578487 146597985 + Gm831 lincRNA lincRNA MGP_NODShiLtJ_T0004375.1 MGP_NODShiLtJ_G0003811.1 mouse_genomes_project 4 34801478 34813441 - Bach2os antisense antisense MGP_NODShiLtJ_T0004376.1 MGP_NODShiLtJ_G0003811.1 mouse_genomes_project 4 34804895 34813396 - Bach2os antisense antisense MGP_NODShiLtJ_T0004377.1 MGP_NODShiLtJ_G0003811.1 mouse_genomes_project 4 34807437 34813487 - Bach2os antisense antisense MGP_NODShiLtJ_T0065171.1 MGP_NODShiLtJ_G0028046.1 mouse_genomes_project 4 49491210 49494591 - MGP_NODShiLtJ_P0065171 protein_coding protein_coding MGP_NODShiLtJ_T0065172.1 MGP_NODShiLtJ_G0028046.1 mouse_genomes_project 4 49491214 49494585 - MGP_NODShiLtJ_P0065172 protein_coding protein_coding MGP_NODShiLtJ_T0065173.1 MGP_NODShiLtJ_G0028046.1 mouse_genomes_project 4 49491214 49494515 - MGP_NODShiLtJ_P0065173 protein_coding protein_coding MGP_NODShiLtJ_T0065174.1 MGP_NODShiLtJ_G0028046.1 mouse_genomes_project 4 49491397 49494585 - MGP_NODShiLtJ_P0065174 protein_coding protein_coding MGP_NODShiLtJ_T0068824.1 MGP_NODShiLtJ_G0028913.1 mouse_genomes_project 4 164938686 164973576 - MGP_NODShiLtJ_P0068824 Mfn2 protein_coding protein_coding MGP_NODShiLtJ_T0068825.1 MGP_NODShiLtJ_G0028913.1 mouse_genomes_project 4 164938686 164973593 - MGP_NODShiLtJ_P0068825 Mfn2 protein_coding protein_coding MGP_NODShiLtJ_T0068826.1 MGP_NODShiLtJ_G0028913.1 mouse_genomes_project 4 164939103 164973587 - MGP_NODShiLtJ_P0068826 Mfn2 protein_coding protein_coding MGP_NODShiLtJ_T0068827.1 MGP_NODShiLtJ_G0028913.1 mouse_genomes_project 4 164946270 164973587 - MGP_NODShiLtJ_P0068827 Mfn2 protein_coding protein_coding MGP_NODShiLtJ_T0068828.1 MGP_NODShiLtJ_G0028913.1 mouse_genomes_project 4 164950483 164952349 - Mfn2 protein_coding processed_transcript MGP_NODShiLtJ_T0068829.1 MGP_NODShiLtJ_G0028913.1 mouse_genomes_project 4 164952159 164972286 - MGP_NODShiLtJ_P0068829 Mfn2 protein_coding protein_coding MGP_NODShiLtJ_T0068830.1 MGP_NODShiLtJ_G0028913.1 mouse_genomes_project 4 164960102 164973547 - MGP_NODShiLtJ_P0068830 Mfn2 protein_coding protein_coding MGP_NODShiLtJ_T0068839.1 MGP_NODShiLtJ_G0028917.1 mouse_genomes_project 4 165090726 165092085 + MGP_NODShiLtJ_P0068839 Nppa protein_coding protein_coding MGP_NODShiLtJ_T0065601.1 MGP_NODShiLtJ_G0028166.1 mouse_genomes_project 4 68955380 68979691 + MGP_NODShiLtJ_P0065601 4933430I17Rik protein_coding protein_coding MGP_NODShiLtJ_T0065602.1 MGP_NODShiLtJ_G0028166.1 mouse_genomes_project 4 68957584 68979460 + MGP_NODShiLtJ_P0065602 4933430I17Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067435.1 MGP_NODShiLtJ_G0028581.1 mouse_genomes_project 4 141083974 141111002 + MGP_NODShiLtJ_P0067435 Col8a2 protein_coding protein_coding MGP_NODShiLtJ_T0067436.1 MGP_NODShiLtJ_G0028581.1 mouse_genomes_project 4 141097490 141106622 + MGP_NODShiLtJ_P0067436 Col8a2 protein_coding protein_coding MGP_NODShiLtJ_T0100540.1 MGP_NODShiLtJ_G0038934.1 mouse_genomes_project 4 61062796 61063011 - Gm25419 snoRNA snoRNA MGP_NODShiLtJ_T0014630.1 MGP_NODShiLtJ_G0012738.1 mouse_genomes_project 4 136383786 136384915 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014564.1 MGP_NODShiLtJ_G0012672.1 mouse_genomes_project 4 117161810 117162051 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066164.1 MGP_NODShiLtJ_G0028303.1 mouse_genomes_project 4 114751152 114852394 + MGP_NODShiLtJ_P0066164 Lepr protein_coding protein_coding MGP_NODShiLtJ_T0066165.1 MGP_NODShiLtJ_G0028303.1 mouse_genomes_project 4 114751152 114854079 + MGP_NODShiLtJ_P0066165 Lepr protein_coding protein_coding MGP_NODShiLtJ_T0066166.1 MGP_NODShiLtJ_G0028303.1 mouse_genomes_project 4 114751152 114828777 + MGP_NODShiLtJ_P0066166 Lepr protein_coding protein_coding MGP_NODShiLtJ_T0066167.1 MGP_NODShiLtJ_G0028303.1 mouse_genomes_project 4 114751155 114768060 + MGP_NODShiLtJ_P0066167 Lepr protein_coding protein_coding MGP_NODShiLtJ_T0066168.1 MGP_NODShiLtJ_G0028303.1 mouse_genomes_project 4 114802399 114814746 + Lepr protein_coding processed_transcript MGP_NODShiLtJ_T0066169.1 MGP_NODShiLtJ_G0028303.1 mouse_genomes_project 4 114806349 114820461 + Lepr protein_coding processed_transcript MGP_NODShiLtJ_T0066170.1 MGP_NODShiLtJ_G0028303.1 mouse_genomes_project 4 114824485 114828675 + Lepr protein_coding processed_transcript MGP_NODShiLtJ_T0100543.1 MGP_NODShiLtJ_G0038937.1 mouse_genomes_project 4 62652936 62653056 - Gm22952 snoRNA snoRNA MGP_NODShiLtJ_T0101927.1 MGP_NODShiLtJ_G0040095.1 mouse_genomes_project 4 132593202 132594116 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0067194.1 MGP_NODShiLtJ_G0028517.1 mouse_genomes_project 4 134714124 134742325 + MGP_NODShiLtJ_P0067194 Gm8439 protein_coding protein_coding MGP_NODShiLtJ_T0101932.1 MGP_NODShiLtJ_G0040100.1 mouse_genomes_project 4 136984419 137006999 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0065331.1 MGP_NODShiLtJ_G0028085.1 mouse_genomes_project 4 53810017 53975734 + Plppr1 protein_coding retained_intron MGP_NODShiLtJ_T0065332.1 MGP_NODShiLtJ_G0028085.1 mouse_genomes_project 4 53810200 54084927 + Plppr1 protein_coding retained_intron MGP_NODShiLtJ_T0065333.1 MGP_NODShiLtJ_G0028085.1 mouse_genomes_project 4 53973566 54159442 + MGP_NODShiLtJ_P0065333 Plppr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067198.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134899644 134967636 - MGP_NODShiLtJ_P0067198 Nfyc protein_coding protein_coding MGP_NODShiLtJ_T0067199.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134899644 134987221 - MGP_NODShiLtJ_P0067199 Nfyc protein_coding protein_coding MGP_NODShiLtJ_T0067200.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134899644 134978549 - MGP_NODShiLtJ_P0067200 Nfyc protein_coding protein_coding MGP_NODShiLtJ_T0067201.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134900159 134905701 - Nfyc protein_coding processed_transcript MGP_NODShiLtJ_T0067202.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134900382 134978556 - MGP_NODShiLtJ_P0067202 Nfyc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067203.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134900382 134933987 - MGP_NODShiLtJ_P0067203 Nfyc protein_coding protein_coding MGP_NODShiLtJ_T0067204.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134900402 134908933 - Nfyc protein_coding processed_transcript MGP_NODShiLtJ_T0067205.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134905190 134911719 - Nfyc protein_coding processed_transcript MGP_NODShiLtJ_T0067206.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134908756 134978527 - MGP_NODShiLtJ_P0067206 Nfyc protein_coding protein_coding MGP_NODShiLtJ_T0067207.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134912380 134978539 - MGP_NODShiLtJ_P0067207 Nfyc protein_coding protein_coding MGP_NODShiLtJ_T0067208.1 MGP_NODShiLtJ_G0028520.1 mouse_genomes_project 4 134922676 134978550 - MGP_NODShiLtJ_P0067208 Nfyc protein_coding protein_coding MGP_NODShiLtJ_T0067694.1 MGP_NODShiLtJ_G0028637.1 mouse_genomes_project 4 144698924 144702889 - MGP_NODShiLtJ_P0067694 protein_coding protein_coding MGP_NODShiLtJ_T0067695.1 MGP_NODShiLtJ_G0028637.1 mouse_genomes_project 4 144699558 144700820 - protein_coding processed_transcript MGP_NODShiLtJ_T0067696.1 MGP_NODShiLtJ_G0028637.1 mouse_genomes_project 4 144701128 144702866 - protein_coding retained_intron MGP_NODShiLtJ_T0067697.1 MGP_NODShiLtJ_G0028637.1 mouse_genomes_project 4 144701887 144702886 - MGP_NODShiLtJ_P0067697 protein_coding protein_coding MGP_NODShiLtJ_T0067698.1 MGP_NODShiLtJ_G0028637.1 mouse_genomes_project 4 144702031 144702870 - protein_coding processed_transcript MGP_NODShiLtJ_T0064350.1 MGP_NODShiLtJ_G0027862.1 mouse_genomes_project 4 8616061 8636938 + MGP_NODShiLtJ_P0064350 Trp53inp1 protein_coding protein_coding MGP_NODShiLtJ_T0064351.1 MGP_NODShiLtJ_G0027862.1 mouse_genomes_project 4 8616071 8636938 + Trp53inp1 protein_coding processed_transcript MGP_NODShiLtJ_T0064352.1 MGP_NODShiLtJ_G0027862.1 mouse_genomes_project 4 8616074 8628936 + Trp53inp1 protein_coding processed_transcript MGP_NODShiLtJ_T0064353.1 MGP_NODShiLtJ_G0027862.1 mouse_genomes_project 4 8626985 8630550 + Trp53inp1 protein_coding processed_transcript MGP_NODShiLtJ_T0014357.1 MGP_NODShiLtJ_G0012465.1 mouse_genomes_project 4 32743294 32743857 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067190.1 MGP_NODShiLtJ_G0028515.1 mouse_genomes_project 4 134653764 134658195 + MGP_NODShiLtJ_P0067190 Slfnl1 protein_coding protein_coding MGP_NODShiLtJ_T0065939.1 MGP_NODShiLtJ_G0028249.1 mouse_genomes_project 4 100309103 100356046 + MGP_NODShiLtJ_P0065939 Mtap protein_coding protein_coding MGP_NODShiLtJ_T0065940.1 MGP_NODShiLtJ_G0028249.1 mouse_genomes_project 4 100351327 100354438 + Mtap protein_coding processed_transcript MGP_NODShiLtJ_T0066701.1 MGP_NODShiLtJ_G0028411.1 mouse_genomes_project 4 129305572 129321220 - MGP_NODShiLtJ_P0066701 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066702.1 MGP_NODShiLtJ_G0028411.1 mouse_genomes_project 4 129305572 129331467 - MGP_NODShiLtJ_P0066702 protein_coding protein_coding MGP_NODShiLtJ_T0014447.1 MGP_NODShiLtJ_G0012555.1 mouse_genomes_project 4 64492509 64493083 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004516.1 MGP_NODShiLtJ_G0003919.1 mouse_genomes_project 4 158138970 158141602 + Ctrcos antisense antisense MGP_NODShiLtJ_T0067739.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145100873 145140982 + MGP_NODShiLtJ_P0067739 Adgrb2 protein_coding protein_coding MGP_NODShiLtJ_T0067740.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145101190 145140982 + MGP_NODShiLtJ_P0067740 Adgrb2 protein_coding protein_coding MGP_NODShiLtJ_T0067741.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145101294 145140982 + MGP_NODShiLtJ_P0067741 Adgrb2 protein_coding protein_coding MGP_NODShiLtJ_T0067742.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145108083 145140982 + MGP_NODShiLtJ_P0067742 Adgrb2 protein_coding protein_coding MGP_NODShiLtJ_T0067743.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145108084 145140688 + MGP_NODShiLtJ_P0067743 Adgrb2 protein_coding protein_coding MGP_NODShiLtJ_T0067744.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145108084 145140688 + MGP_NODShiLtJ_P0067744 Adgrb2 protein_coding protein_coding MGP_NODShiLtJ_T0067745.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145108084 145140688 + MGP_NODShiLtJ_P0067745 Adgrb2 protein_coding protein_coding MGP_NODShiLtJ_T0067746.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145128211 145130196 + Adgrb2 protein_coding retained_intron MGP_NODShiLtJ_T0067747.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145128404 145130876 + Adgrb2 protein_coding retained_intron MGP_NODShiLtJ_T0067748.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145130530 145130907 + Adgrb2 protein_coding retained_intron MGP_NODShiLtJ_T0067749.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145131969 145132915 + Adgrb2 protein_coding retained_intron MGP_NODShiLtJ_T0067750.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145137126 145139913 + Adgrb2 protein_coding retained_intron MGP_NODShiLtJ_T0067751.1 MGP_NODShiLtJ_G0028645.1 mouse_genomes_project 4 145139464 145140780 + Adgrb2 protein_coding retained_intron MGP_NODShiLtJ_T0010531.1 MGP_NODShiLtJ_G0008664.1 mouse_genomes_project 4 149971627 149971718 + Gm23634 miRNA miRNA MGP_NODShiLtJ_T0065514.1 MGP_NODShiLtJ_G0028137.1 mouse_genomes_project 4 65061790 65089760 + MGP_NODShiLtJ_P0065514 Dnajc25 protein_coding protein_coding MGP_NODShiLtJ_T0065515.1 MGP_NODShiLtJ_G0028137.1 mouse_genomes_project 4 65072876 65094147 + MGP_NODShiLtJ_P0065515 Dnajc25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065516.1 MGP_NODShiLtJ_G0028137.1 mouse_genomes_project 4 65072887 65094147 + MGP_NODShiLtJ_P0065516 Dnajc25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065518.1 MGP_NODShiLtJ_G0028137.1 mouse_genomes_project 4 65072925 65094158 + MGP_NODShiLtJ_P0065518 Dnajc25 protein_coding protein_coding MGP_NODShiLtJ_T0067040.1 MGP_NODShiLtJ_G0028474.1 mouse_genomes_project 4 132342540 132347006 - MGP_NODShiLtJ_P0067040 Cdc20 protein_coding protein_coding MGP_NODShiLtJ_T0067041.1 MGP_NODShiLtJ_G0028474.1 mouse_genomes_project 4 132342744 132346232 - MGP_NODShiLtJ_P0067041 Cdc20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067042.1 MGP_NODShiLtJ_G0028474.1 mouse_genomes_project 4 132343187 132345475 - Cdc20 protein_coding retained_intron MGP_NODShiLtJ_T0014466.1 MGP_NODShiLtJ_G0012574.1 mouse_genomes_project 4 77425318 77426056 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065919.1 MGP_NODShiLtJ_G0028233.1 mouse_genomes_project 4 99669537 99670110 - MGP_NODShiLtJ_P0065919 Ifna9 protein_coding protein_coding MGP_NODShiLtJ_T0066261.1 MGP_NODShiLtJ_G0028323.1 mouse_genomes_project 4 119164147 119172780 + MGP_NODShiLtJ_P0066261 Gm12728 protein_coding protein_coding MGP_NODShiLtJ_T0066262.1 MGP_NODShiLtJ_G0028323.1 mouse_genomes_project 4 119164812 119172780 + MGP_NODShiLtJ_P0066262 Gm12728 protein_coding protein_coding MGP_NODShiLtJ_T0066263.1 MGP_NODShiLtJ_G0028323.1 mouse_genomes_project 4 119172570 119173063 + Gm12728 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0064860.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47113666 47137209 + Phf24 protein_coding processed_transcript MGP_NODShiLtJ_T0064861.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47113687 47133140 + MGP_NODShiLtJ_P0064861 Phf24 protein_coding protein_coding MGP_NODShiLtJ_T0064862.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47113700 47144061 + MGP_NODShiLtJ_P0064862 Phf24 protein_coding protein_coding MGP_NODShiLtJ_T0064863.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47114257 47144061 + MGP_NODShiLtJ_P0064863 Phf24 protein_coding protein_coding MGP_NODShiLtJ_T0064864.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47114276 47144061 + MGP_NODShiLtJ_P0064864 Phf24 protein_coding protein_coding MGP_NODShiLtJ_T0064865.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47114340 47139666 + MGP_NODShiLtJ_P0064865 Phf24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064866.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47120403 47133106 + MGP_NODShiLtJ_P0064866 Phf24 protein_coding protein_coding MGP_NODShiLtJ_T0064867.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47133227 47138822 + MGP_NODShiLtJ_P0064867 Phf24 protein_coding protein_coding MGP_NODShiLtJ_T0064868.1 MGP_NODShiLtJ_G0027997.1 mouse_genomes_project 4 47137562 47139142 + MGP_NODShiLtJ_P0064868 Phf24 protein_coding protein_coding MGP_NODShiLtJ_T0097806.1 MGP_NODShiLtJ_G0036218.1 mouse_genomes_project 4 39990758 39991096 - pseudogene pseudogene MGP_NODShiLtJ_T0017967.1 MGP_NODShiLtJ_G0015453.1 mouse_genomes_project 4 173452676 173468686 - Gm16023 processed_transcript processed_transcript MGP_NODShiLtJ_T0017968.1 MGP_NODShiLtJ_G0015453.1 mouse_genomes_project 4 173460173 173468411 - Gm16023 processed_transcript processed_transcript MGP_NODShiLtJ_T0014302.1 MGP_NODShiLtJ_G0012410.1 mouse_genomes_project 4 14102970 14104292 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067790.1 MGP_NODShiLtJ_G0028653.1 mouse_genomes_project 4 145463277 145470146 + MGP_NODShiLtJ_P0067790 Fabp3 protein_coding protein_coding MGP_NODShiLtJ_T0065984.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107401400 107443111 - MGP_NODShiLtJ_P0065984 Mysm1 protein_coding protein_coding MGP_NODShiLtJ_T0065985.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107401423 107414561 - Mysm1 protein_coding processed_transcript MGP_NODShiLtJ_T0065986.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107407113 107414692 - Mysm1 protein_coding processed_transcript MGP_NODShiLtJ_T0065987.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107427753 107443086 - Mysm1 protein_coding processed_transcript MGP_NODShiLtJ_T0065988.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107428980 107443053 - Mysm1 protein_coding processed_transcript MGP_NODShiLtJ_T0065989.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107429020 107433650 - Mysm1 protein_coding processed_transcript MGP_NODShiLtJ_T0065990.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107429112 107443089 - Mysm1 protein_coding processed_transcript MGP_NODShiLtJ_T0065991.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107433277 107443064 - Mysm1 protein_coding processed_transcript MGP_NODShiLtJ_T0065992.1 MGP_NODShiLtJ_G0028263.1 mouse_genomes_project 4 107436387 107443086 - Mysm1 protein_coding processed_transcript MGP_NODShiLtJ_T0004482.1 MGP_NODShiLtJ_G0003892.1 mouse_genomes_project 4 143955361 143959517 + Gm15904 antisense antisense MGP_NODShiLtJ_T0068884.1 MGP_NODShiLtJ_G0028927.1 mouse_genomes_project 4 165579232 165598081 - MGP_NODShiLtJ_P0068884 Ubiad1 protein_coding protein_coding MGP_NODShiLtJ_T0068885.1 MGP_NODShiLtJ_G0028927.1 mouse_genomes_project 4 165581227 165598071 - Ubiad1 protein_coding processed_transcript MGP_NODShiLtJ_T0007824.1 MGP_NODShiLtJ_G0006391.1 mouse_genomes_project 4 101481558 101486277 + Gm12629 lincRNA lincRNA MGP_NODShiLtJ_T0014377.1 MGP_NODShiLtJ_G0012485.1 mouse_genomes_project 4 39342206 39343012 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068125.1 MGP_NODShiLtJ_G0028722.1 mouse_genomes_project 4 149726079 149727491 + MGP_NODShiLtJ_P0068125 E130218I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0068126.1 MGP_NODShiLtJ_G0028722.1 mouse_genomes_project 4 149726180 149728291 + MGP_NODShiLtJ_P0068126 E130218I03Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068127.1 MGP_NODShiLtJ_G0028722.1 mouse_genomes_project 4 149726180 149728287 + MGP_NODShiLtJ_P0068127 E130218I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0068128.1 MGP_NODShiLtJ_G0028722.1 mouse_genomes_project 4 149726193 149727407 + MGP_NODShiLtJ_P0068128 E130218I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0068129.1 MGP_NODShiLtJ_G0028722.1 mouse_genomes_project 4 149726193 149727730 + MGP_NODShiLtJ_P0068129 E130218I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0068130.1 MGP_NODShiLtJ_G0028722.1 mouse_genomes_project 4 149726194 149727970 + MGP_NODShiLtJ_P0068130 E130218I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0068131.1 MGP_NODShiLtJ_G0028722.1 mouse_genomes_project 4 149726195 149727937 + MGP_NODShiLtJ_P0068131 E130218I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0068132.1 MGP_NODShiLtJ_G0028722.1 mouse_genomes_project 4 149726400 149727695 + E130218I03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0067362.1 MGP_NODShiLtJ_G0028564.1 mouse_genomes_project 4 139681563 139704599 + MGP_NODShiLtJ_P0067362 Rspo1 protein_coding protein_coding MGP_NODShiLtJ_T0067363.1 MGP_NODShiLtJ_G0028564.1 mouse_genomes_project 4 139702985 139704031 + Rspo1 protein_coding processed_transcript MGP_NODShiLtJ_T0066771.1 MGP_NODShiLtJ_G0028426.1 mouse_genomes_project 4 129833387 129845591 - MGP_NODShiLtJ_P0066771 Lurap1 protein_coding protein_coding MGP_NODShiLtJ_T0066774.1 MGP_NODShiLtJ_G0028426.1 mouse_genomes_project 4 129838501 129852829 - Lurap1 protein_coding processed_transcript MGP_NODShiLtJ_T0004399.1 MGP_NODShiLtJ_G0003830.1 mouse_genomes_project 4 58856205 58861125 + 4930522O17Rik antisense antisense MGP_NODShiLtJ_T0014415.1 MGP_NODShiLtJ_G0012523.1 mouse_genomes_project 4 54136600 54139323 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007758.1 MGP_NODShiLtJ_G0006336.1 mouse_genomes_project 4 32400930 32534225 + lincRNA lincRNA MGP_NODShiLtJ_T0065668.1 MGP_NODShiLtJ_G0028180.1 mouse_genomes_project 4 70141451 70160094 - MGP_NODShiLtJ_P0065668 1700018C11Rik protein_coding protein_coding MGP_NODShiLtJ_T0065669.1 MGP_NODShiLtJ_G0028180.1 mouse_genomes_project 4 70141451 70160106 - MGP_NODShiLtJ_P0065669 1700018C11Rik protein_coding protein_coding MGP_NODShiLtJ_T0004459.1 MGP_NODShiLtJ_G0003873.1 mouse_genomes_project 4 131755349 131757701 + Gm12841 antisense antisense MGP_NODShiLtJ_T0069532.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173768209 173784910 + MGP_NODShiLtJ_P0069532 Acap3 protein_coding protein_coding MGP_NODShiLtJ_T0069533.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173768262 173784911 + MGP_NODShiLtJ_P0069533 Acap3 protein_coding protein_coding MGP_NODShiLtJ_T0069534.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173768289 173777132 + Acap3 protein_coding processed_transcript MGP_NODShiLtJ_T0069535.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173768659 173777274 + Acap3 protein_coding processed_transcript MGP_NODShiLtJ_T0069536.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173768699 173784911 + Acap3 protein_coding processed_transcript MGP_NODShiLtJ_T0069537.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173779247 173780350 + Acap3 protein_coding retained_intron MGP_NODShiLtJ_T0069538.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173780238 173782765 + Acap3 protein_coding retained_intron MGP_NODShiLtJ_T0069539.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173780900 173782996 + Acap3 protein_coding processed_transcript MGP_NODShiLtJ_T0069540.1 MGP_NODShiLtJ_G0029041.1 mouse_genomes_project 4 173783013 173783572 + Acap3 protein_coding processed_transcript MGP_NODShiLtJ_T0010473.1 MGP_NODShiLtJ_G0008606.1 mouse_genomes_project 4 11404221 11405155 - miRNA miRNA MGP_NODShiLtJ_T0066132.1 MGP_NODShiLtJ_G0028295.1 mouse_genomes_project 4 113435220 113507418 + MGP_NODShiLtJ_P0066132 Ube2u protein_coding protein_coding MGP_NODShiLtJ_T0066133.1 MGP_NODShiLtJ_G0028295.1 mouse_genomes_project 4 113435238 113507416 + MGP_NODShiLtJ_P0066133 Ube2u protein_coding protein_coding MGP_NODShiLtJ_T0014341.1 MGP_NODShiLtJ_G0012449.1 mouse_genomes_project 4 27091876 27092093 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007883.1 MGP_NODShiLtJ_G0006437.1 mouse_genomes_project 4 140632018 140669523 - 2610028E06Rik lincRNA lincRNA MGP_NODShiLtJ_T0007884.1 MGP_NODShiLtJ_G0006437.1 mouse_genomes_project 4 140632018 140643132 - 2610028E06Rik lincRNA lincRNA MGP_NODShiLtJ_T0007885.1 MGP_NODShiLtJ_G0006437.1 mouse_genomes_project 4 140632363 140669630 - 2610028E06Rik lincRNA lincRNA MGP_NODShiLtJ_T0007886.1 MGP_NODShiLtJ_G0006437.1 mouse_genomes_project 4 140634581 140664348 - 2610028E06Rik lincRNA lincRNA MGP_NODShiLtJ_T0007887.1 MGP_NODShiLtJ_G0006437.1 mouse_genomes_project 4 140665762 140669630 - 2610028E06Rik lincRNA lincRNA MGP_NODShiLtJ_T0066236.1 MGP_NODShiLtJ_G0028314.1 mouse_genomes_project 4 116405895 116465246 - MGP_NODShiLtJ_P0066236 4921539E11Rik protein_coding protein_coding MGP_NODShiLtJ_T0066237.1 MGP_NODShiLtJ_G0028314.1 mouse_genomes_project 4 116405895 116465246 - MGP_NODShiLtJ_P0066237 4921539E11Rik protein_coding protein_coding MGP_NODShiLtJ_T0066238.1 MGP_NODShiLtJ_G0028314.1 mouse_genomes_project 4 116412634 116465246 - MGP_NODShiLtJ_P0066238 4921539E11Rik protein_coding protein_coding MGP_NODShiLtJ_T0101933.1 MGP_NODShiLtJ_G0040101.1 mouse_genomes_project 4 137051992 137059970 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0066651.1 MGP_NODShiLtJ_G0028391.1 mouse_genomes_project 4 126284387 126349927 + MGP_NODShiLtJ_P0066651 Skint2 protein_coding protein_coding MGP_NODShiLtJ_T0066652.1 MGP_NODShiLtJ_G0028391.1 mouse_genomes_project 4 126288130 126310005 + MGP_NODShiLtJ_P0066652 Skint2 protein_coding protein_coding MGP_NODShiLtJ_T0066653.1 MGP_NODShiLtJ_G0028391.1 mouse_genomes_project 4 126288273 126354717 + MGP_NODShiLtJ_P0066653 Skint2 protein_coding protein_coding MGP_NODShiLtJ_T0066654.1 MGP_NODShiLtJ_G0028391.1 mouse_genomes_project 4 126288284 126349927 + Skint2 protein_coding processed_transcript MGP_NODShiLtJ_T0067229.1 MGP_NODShiLtJ_G0028527.1 mouse_genomes_project 4 135274785 135278361 - MGP_NODShiLtJ_P0067229 Tmco2 protein_coding protein_coding MGP_NODShiLtJ_T0099269.1 MGP_NODShiLtJ_G0037663.1 mouse_genomes_project 4 70169394 70169501 - Gm24234 snRNA snRNA MGP_NODShiLtJ_T0014355.1 MGP_NODShiLtJ_G0012463.1 mouse_genomes_project 4 31184217 31184725 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067726.1 MGP_NODShiLtJ_G0028642.1 mouse_genomes_project 4 144793571 144835408 - MGP_NODShiLtJ_P0067726 Khdrbs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067727.1 MGP_NODShiLtJ_G0028642.1 mouse_genomes_project 4 144794230 144804250 - Khdrbs1 protein_coding retained_intron MGP_NODShiLtJ_T0067728.1 MGP_NODShiLtJ_G0028642.1 mouse_genomes_project 4 144804248 144835407 - MGP_NODShiLtJ_P0067728 Khdrbs1 protein_coding protein_coding MGP_NODShiLtJ_T0067729.1 MGP_NODShiLtJ_G0028642.1 mouse_genomes_project 4 144819661 144835414 - Khdrbs1 protein_coding retained_intron MGP_NODShiLtJ_T0014491.1 MGP_NODShiLtJ_G0012599.1 mouse_genomes_project 4 85832838 85833232 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068736.1 MGP_NODShiLtJ_G0028870.1 mouse_genomes_project 4 159510914 159632857 - MGP_NODShiLtJ_P0068736 Prdm2 protein_coding protein_coding MGP_NODShiLtJ_T0068737.1 MGP_NODShiLtJ_G0028870.1 mouse_genomes_project 4 159567017 159605175 - MGP_NODShiLtJ_P0068737 Prdm2 protein_coding protein_coding MGP_NODShiLtJ_T0068738.1 MGP_NODShiLtJ_G0028870.1 mouse_genomes_project 4 159567041 159632861 - MGP_NODShiLtJ_P0068738 Prdm2 protein_coding protein_coding MGP_NODShiLtJ_T0068739.1 MGP_NODShiLtJ_G0028870.1 mouse_genomes_project 4 159586118 159633141 - Prdm2 protein_coding processed_transcript MGP_NODShiLtJ_T0064235.1 MGP_NODShiLtJ_G0027840.1 mouse_genomes_project 4 570703 572152 - MGP_NODShiLtJ_P0064235 Mos protein_coding protein_coding MGP_NODShiLtJ_T0068316.1 MGP_NODShiLtJ_G0028768.1 mouse_genomes_project 4 151926523 151932191 + MGP_NODShiLtJ_P0068316 Zfp46 protein_coding protein_coding MGP_NODShiLtJ_T0068317.1 MGP_NODShiLtJ_G0028768.1 mouse_genomes_project 4 151926615 151931948 + MGP_NODShiLtJ_P0068317 Zfp46 protein_coding protein_coding MGP_NODShiLtJ_T0068318.1 MGP_NODShiLtJ_G0028768.1 mouse_genomes_project 4 151926909 151928314 + Zfp46 protein_coding processed_transcript MGP_NODShiLtJ_T0068319.1 MGP_NODShiLtJ_G0028768.1 mouse_genomes_project 4 151927905 151935830 + MGP_NODShiLtJ_P0068319 Zfp46 protein_coding protein_coding MGP_NODShiLtJ_T0068320.1 MGP_NODShiLtJ_G0028768.1 mouse_genomes_project 4 151927942 151932112 + MGP_NODShiLtJ_P0068320 Zfp46 protein_coding protein_coding MGP_NODShiLtJ_T0065330.1 MGP_NODShiLtJ_G0028084.1 mouse_genomes_project 4 53377636 53387556 + MGP_NODShiLtJ_P0065330 Murc protein_coding protein_coding MGP_NODShiLtJ_T0097810.1 MGP_NODShiLtJ_G0036222.1 mouse_genomes_project 4 144962294 144963940 + pseudogene pseudogene MGP_NODShiLtJ_T0067433.1 MGP_NODShiLtJ_G0028580.1 mouse_genomes_project 4 141055998 141069149 + MGP_NODShiLtJ_P0067433 Trappc3 protein_coding protein_coding MGP_NODShiLtJ_T0067434.1 MGP_NODShiLtJ_G0028580.1 mouse_genomes_project 4 141056073 141067179 + Trappc3 protein_coding processed_transcript MGP_NODShiLtJ_T0010555.1 MGP_NODShiLtJ_G0008688.1 mouse_genomes_project 4 173946306 173946376 - Mir200b miRNA miRNA MGP_NODShiLtJ_T0014485.1 MGP_NODShiLtJ_G0012593.1 mouse_genomes_project 4 84032786 84033966 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014456.1 MGP_NODShiLtJ_G0012564.1 mouse_genomes_project 4 70444750 70445629 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067397.1 MGP_NODShiLtJ_G0028574.1 mouse_genomes_project 4 140874436 140876397 + MGP_NODShiLtJ_P0067397 Lsm10 protein_coding protein_coding MGP_NODShiLtJ_T0067398.1 MGP_NODShiLtJ_G0028574.1 mouse_genomes_project 4 140874466 140876394 + MGP_NODShiLtJ_P0067398 Lsm10 protein_coding protein_coding MGP_NODShiLtJ_T0067399.1 MGP_NODShiLtJ_G0028574.1 mouse_genomes_project 4 140874473 140875946 + MGP_NODShiLtJ_P0067399 Lsm10 protein_coding protein_coding MGP_NODShiLtJ_T0065904.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99124551 99154967 + Focad protein_coding retained_intron MGP_NODShiLtJ_T0065905.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99124552 99472313 + MGP_NODShiLtJ_P0065905 Focad protein_coding protein_coding MGP_NODShiLtJ_T0065906.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99124567 99219922 + Focad protein_coding retained_intron MGP_NODShiLtJ_T0065907.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99154453 99472311 + MGP_NODShiLtJ_P0065907 Focad protein_coding protein_coding MGP_NODShiLtJ_T0065908.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99157590 99190064 + Focad protein_coding retained_intron MGP_NODShiLtJ_T0065909.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99352863 99380380 + Focad protein_coding retained_intron MGP_NODShiLtJ_T0065910.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99400313 99472316 + Focad protein_coding retained_intron MGP_NODShiLtJ_T0065912.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99460189 99468526 + Focad protein_coding processed_transcript MGP_NODShiLtJ_T0065913.1 MGP_NODShiLtJ_G0028228.1 mouse_genomes_project 4 99460404 99472318 + MGP_NODShiLtJ_P0065913 Focad protein_coding protein_coding MGP_NODShiLtJ_T0014567.1 MGP_NODShiLtJ_G0012675.1 mouse_genomes_project 4 118713005 118713454 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067914.1 MGP_NODShiLtJ_G0028677.1 mouse_genomes_project 4 147727567 147730494 - MGP_NODShiLtJ_P0067914 Atpif1 protein_coding protein_coding MGP_NODShiLtJ_T0067915.1 MGP_NODShiLtJ_G0028677.1 mouse_genomes_project 4 147727567 147730665 - MGP_NODShiLtJ_P0067915 Atpif1 protein_coding protein_coding MGP_NODShiLtJ_T0067916.1 MGP_NODShiLtJ_G0028677.1 mouse_genomes_project 4 147729493 147730601 - Atpif1 protein_coding retained_intron MGP_NODShiLtJ_T0011471.1 MGP_NODShiLtJ_G0009604.1 mouse_genomes_project 4 130500034 130500125 + Gm27688 misc_RNA misc_RNA MGP_NODShiLtJ_T0014657.1 MGP_NODShiLtJ_G0012765.1 mouse_genomes_project 4 147285388 147285860 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067525.1 MGP_NODShiLtJ_G0028602.1 mouse_genomes_project 4 142260517 142263505 - MGP_NODShiLtJ_P0067525 Gjb4 protein_coding protein_coding MGP_NODShiLtJ_T0067526.1 MGP_NODShiLtJ_G0028602.1 mouse_genomes_project 4 142260517 142263505 - MGP_NODShiLtJ_P0067526 Gjb4 protein_coding protein_coding MGP_NODShiLtJ_T0064524.1 MGP_NODShiLtJ_G0027910.1 mouse_genomes_project 4 22004884 22024800 + Fbxl4 protein_coding processed_transcript MGP_NODShiLtJ_T0064525.1 MGP_NODShiLtJ_G0027910.1 mouse_genomes_project 4 22004884 22084690 + MGP_NODShiLtJ_P0064525 Fbxl4 protein_coding protein_coding MGP_NODShiLtJ_T0064526.1 MGP_NODShiLtJ_G0027910.1 mouse_genomes_project 4 22004901 22084663 + MGP_NODShiLtJ_P0064526 Fbxl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064527.1 MGP_NODShiLtJ_G0027910.1 mouse_genomes_project 4 22004912 22084687 + MGP_NODShiLtJ_P0064527 Fbxl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064528.1 MGP_NODShiLtJ_G0027910.1 mouse_genomes_project 4 22004957 22084674 + MGP_NODShiLtJ_P0064528 Fbxl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067305.1 MGP_NODShiLtJ_G0028547.1 mouse_genomes_project 4 138269907 138286007 - MGP_NODShiLtJ_P0067305 Akirin1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067306.1 MGP_NODShiLtJ_G0028547.1 mouse_genomes_project 4 138272668 138279619 - Akirin1 protein_coding processed_transcript MGP_NODShiLtJ_T0067307.1 MGP_NODShiLtJ_G0028547.1 mouse_genomes_project 4 138273794 138286104 - Akirin1 protein_coding processed_transcript MGP_NODShiLtJ_T0067284.1 MGP_NODShiLtJ_G0028544.1 mouse_genomes_project 4 137798413 137829459 - MGP_NODShiLtJ_P0067284 Bmp8a protein_coding protein_coding MGP_NODShiLtJ_T0004520.1 MGP_NODShiLtJ_G0003923.1 mouse_genomes_project 4 158407868 158411923 + Tmem51os1 antisense antisense MGP_NODShiLtJ_T0004521.1 MGP_NODShiLtJ_G0003923.1 mouse_genomes_project 4 158408197 158411956 + Tmem51os1 antisense antisense MGP_NODShiLtJ_T0004522.1 MGP_NODShiLtJ_G0003923.1 mouse_genomes_project 4 158408239 158411920 + Tmem51os1 antisense antisense MGP_NODShiLtJ_T0004523.1 MGP_NODShiLtJ_G0003923.1 mouse_genomes_project 4 158408755 158411934 + Tmem51os1 antisense antisense MGP_NODShiLtJ_T0067609.1 MGP_NODShiLtJ_G0028620.1 mouse_genomes_project 4 144235310 144265021 + MGP_NODShiLtJ_P0067609 Yars protein_coding protein_coding MGP_NODShiLtJ_T0067610.1 MGP_NODShiLtJ_G0028620.1 mouse_genomes_project 4 144235450 144242978 + Yars protein_coding retained_intron MGP_NODShiLtJ_T0067611.1 MGP_NODShiLtJ_G0028620.1 mouse_genomes_project 4 144242651 144255967 + MGP_NODShiLtJ_P0067611 Yars protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067612.1 MGP_NODShiLtJ_G0028620.1 mouse_genomes_project 4 144242770 144254034 + Yars protein_coding processed_transcript MGP_NODShiLtJ_T0067613.1 MGP_NODShiLtJ_G0028620.1 mouse_genomes_project 4 144254956 144256241 + Yars protein_coding retained_intron MGP_NODShiLtJ_T0067614.1 MGP_NODShiLtJ_G0028620.1 mouse_genomes_project 4 144257622 144261103 + Yars protein_coding retained_intron MGP_NODShiLtJ_T0067615.1 MGP_NODShiLtJ_G0028620.1 mouse_genomes_project 4 144258074 144264077 + Yars protein_coding processed_transcript MGP_NODShiLtJ_T0067616.1 MGP_NODShiLtJ_G0028620.1 mouse_genomes_project 4 144259138 144260315 + Yars protein_coding retained_intron MGP_NODShiLtJ_T0007830.1 MGP_NODShiLtJ_G0006397.1 mouse_genomes_project 4 107566433 107568771 - 4930551L18Rik lincRNA lincRNA MGP_NODShiLtJ_T0098030.1 MGP_NODShiLtJ_G0036442.1 mouse_genomes_project 4 45393204 45393319 + n-R5s183 rRNA rRNA MGP_NODShiLtJ_T0017959.1 MGP_NODShiLtJ_G0015448.1 mouse_genomes_project 4 169921858 169923375 - Gm13645 processed_transcript processed_transcript MGP_NODShiLtJ_T0066957.1 MGP_NODShiLtJ_G0028460.1 mouse_genomes_project 4 131620005 131631065 - MGP_NODShiLtJ_P0066957 Klf17 protein_coding protein_coding MGP_NODShiLtJ_T0065749.1 MGP_NODShiLtJ_G0028205.1 mouse_genomes_project 4 91297576 91343752 + MGP_NODShiLtJ_P0065749 Lurap1l protein_coding protein_coding MGP_NODShiLtJ_T0014635.1 MGP_NODShiLtJ_G0012743.1 mouse_genomes_project 4 137922463 137922781 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065967.1 MGP_NODShiLtJ_G0028258.1 mouse_genomes_project 4 106983272 106983805 + MGP_NODShiLtJ_P0065967 Gm10306 protein_coding protein_coding MGP_NODShiLtJ_T0017894.1 MGP_NODShiLtJ_G0015409.1 mouse_genomes_project 4 37822871 37832738 + Gm12367 processed_transcript processed_transcript MGP_NODShiLtJ_T0017895.1 MGP_NODShiLtJ_G0015409.1 mouse_genomes_project 4 37822889 37832836 + Gm12367 processed_transcript processed_transcript MGP_NODShiLtJ_T0017896.1 MGP_NODShiLtJ_G0015409.1 mouse_genomes_project 4 37822906 37866600 + Gm12367 processed_transcript processed_transcript MGP_NODShiLtJ_T0065175.1 MGP_NODShiLtJ_G0028047.1 mouse_genomes_project 4 49588049 49675043 + MGP_NODShiLtJ_P0065175 Frmpd1 protein_coding protein_coding MGP_NODShiLtJ_T0065176.1 MGP_NODShiLtJ_G0028047.1 mouse_genomes_project 4 49588080 49699129 + MGP_NODShiLtJ_P0065176 Frmpd1 protein_coding protein_coding MGP_NODShiLtJ_T0065177.1 MGP_NODShiLtJ_G0028047.1 mouse_genomes_project 4 49607400 49699129 + MGP_NODShiLtJ_P0065177 Frmpd1 protein_coding protein_coding MGP_NODShiLtJ_T0014563.1 MGP_NODShiLtJ_G0012671.1 mouse_genomes_project 4 116753907 116755261 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007907.1 MGP_NODShiLtJ_G0006451.1 mouse_genomes_project 4 145826622 145828409 + Gm12972 lincRNA lincRNA MGP_NODShiLtJ_T0069541.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816301 173831503 + MGP_NODShiLtJ_P0069541 Ube2j2 protein_coding protein_coding MGP_NODShiLtJ_T0069542.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816301 173834706 + MGP_NODShiLtJ_P0069542 Ube2j2 protein_coding protein_coding MGP_NODShiLtJ_T0069543.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816320 173834706 + MGP_NODShiLtJ_P0069543 Ube2j2 protein_coding protein_coding MGP_NODShiLtJ_T0069544.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816331 173822742 + MGP_NODShiLtJ_P0069544 Ube2j2 protein_coding protein_coding MGP_NODShiLtJ_T0069545.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816334 173825143 + Ube2j2 protein_coding processed_transcript MGP_NODShiLtJ_T0069546.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816339 173831503 + MGP_NODShiLtJ_P0069546 Ube2j2 protein_coding protein_coding MGP_NODShiLtJ_T0069547.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816462 173831357 + MGP_NODShiLtJ_P0069547 Ube2j2 protein_coding protein_coding MGP_NODShiLtJ_T0069548.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816470 173825307 + Ube2j2 protein_coding retained_intron MGP_NODShiLtJ_T0069549.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816628 173831506 + MGP_NODShiLtJ_P0069549 Ube2j2 protein_coding protein_coding MGP_NODShiLtJ_T0069550.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173816628 173831503 + MGP_NODShiLtJ_P0069550 Ube2j2 protein_coding protein_coding MGP_NODShiLtJ_T0069551.1 MGP_NODShiLtJ_G0029042.1 mouse_genomes_project 4 173829787 173831274 + Ube2j2 protein_coding processed_transcript MGP_NODShiLtJ_T0067663.1 MGP_NODShiLtJ_G0028633.1 mouse_genomes_project 4 144659786 144660429 - Fam167b protein_coding processed_transcript MGP_NODShiLtJ_T0067664.1 MGP_NODShiLtJ_G0028633.1 mouse_genomes_project 4 144659786 144661521 - MGP_NODShiLtJ_P0067664 Fam167b protein_coding protein_coding MGP_NODShiLtJ_T0101935.1 MGP_NODShiLtJ_G0040103.1 mouse_genomes_project 4 137150128 137160232 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0067065.1 MGP_NODShiLtJ_G0028483.1 mouse_genomes_project 4 132628893 132629832 + MGP_NODShiLtJ_P0067065 Olfr1341 protein_coding protein_coding MGP_NODShiLtJ_T0014427.1 MGP_NODShiLtJ_G0012535.1 mouse_genomes_project 4 58382335 58382956 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014329.1 MGP_NODShiLtJ_G0012437.1 mouse_genomes_project 4 23395550 23396465 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066031.1 MGP_NODShiLtJ_G0028271.1 mouse_genomes_project 4 109034256 109105214 - MGP_NODShiLtJ_P0066031 Cyp2j8 protein_coding protein_coding MGP_NODShiLtJ_T0100571.1 MGP_NODShiLtJ_G0038965.1 mouse_genomes_project 4 130978187 130978258 - Snord38a snoRNA snoRNA MGP_NODShiLtJ_T0014413.1 MGP_NODShiLtJ_G0012521.1 mouse_genomes_project 4 53713687 53714025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014430.1 MGP_NODShiLtJ_G0012538.1 mouse_genomes_project 4 59282885 59283934 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014386.1 MGP_NODShiLtJ_G0012494.1 mouse_genomes_project 4 43794047 43794966 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014268.1 MGP_NODShiLtJ_G0012376.1 mouse_genomes_project 4 3015016 3015770 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004416.1 MGP_NODShiLtJ_G0003846.1 mouse_genomes_project 4 107443213 107503630 + Gm12694 antisense antisense MGP_NODShiLtJ_T0099319.1 MGP_NODShiLtJ_G0037713.1 mouse_genomes_project 4 154800938 154801039 - Gm25280 snRNA snRNA MGP_NODShiLtJ_T0067350.1 MGP_NODShiLtJ_G0028560.1 mouse_genomes_project 4 139528588 139532924 + MGP_NODShiLtJ_P0067350 Yrdc protein_coding protein_coding MGP_NODShiLtJ_T0067351.1 MGP_NODShiLtJ_G0028560.1 mouse_genomes_project 4 139529719 139532567 + Yrdc protein_coding retained_intron MGP_NODShiLtJ_T0004403.1 MGP_NODShiLtJ_G0003834.1 mouse_genomes_project 4 68458007 68545265 + antisense antisense MGP_NODShiLtJ_T0065699.1 MGP_NODShiLtJ_G0028192.1 mouse_genomes_project 4 79656774 79659100 - MGP_NODShiLtJ_P0065699 Gm11232 protein_coding protein_coding MGP_NODShiLtJ_T0067070.1 MGP_NODShiLtJ_G0028488.1 mouse_genomes_project 4 132737648 132738831 - MGP_NODShiLtJ_P0067070 protein_coding protein_coding MGP_NODShiLtJ_T0065598.1 MGP_NODShiLtJ_G0028165.1 mouse_genomes_project 4 68951913 68955080 - MGP_NODShiLtJ_P0065598 Pole3 protein_coding protein_coding MGP_NODShiLtJ_T0065599.1 MGP_NODShiLtJ_G0028165.1 mouse_genomes_project 4 68951913 68955080 - MGP_NODShiLtJ_P0065599 Pole3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065600.1 MGP_NODShiLtJ_G0028165.1 mouse_genomes_project 4 68954346 68955050 - Pole3 protein_coding retained_intron MGP_NODShiLtJ_T0010503.1 MGP_NODShiLtJ_G0008636.1 mouse_genomes_project 4 111467053 111467149 + Gm26154 miRNA miRNA MGP_NODShiLtJ_T0066349.1 MGP_NODShiLtJ_G0028340.1 mouse_genomes_project 4 120646481 120669153 + MGP_NODShiLtJ_P0066349 Tmem59 protein_coding protein_coding MGP_NODShiLtJ_T0066350.1 MGP_NODShiLtJ_G0028340.1 mouse_genomes_project 4 120646609 120658775 + MGP_NODShiLtJ_P0066350 Tmem59 protein_coding protein_coding MGP_NODShiLtJ_T0066351.1 MGP_NODShiLtJ_G0028340.1 mouse_genomes_project 4 120646609 120668855 + MGP_NODShiLtJ_P0066351 Tmem59 protein_coding protein_coding MGP_NODShiLtJ_T0066352.1 MGP_NODShiLtJ_G0028340.1 mouse_genomes_project 4 120646749 120658978 + Tmem59 protein_coding retained_intron MGP_NODShiLtJ_T0066353.1 MGP_NODShiLtJ_G0028340.1 mouse_genomes_project 4 120646808 120668663 + MGP_NODShiLtJ_P0066353 Tmem59 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066354.1 MGP_NODShiLtJ_G0028340.1 mouse_genomes_project 4 120647100 120669151 + Tmem59 protein_coding processed_transcript MGP_NODShiLtJ_T0064336.1 MGP_NODShiLtJ_G0027859.1 mouse_genomes_project 4 8275361 8303480 + MGP_NODShiLtJ_P0064336 2610301B20Rik protein_coding protein_coding MGP_NODShiLtJ_T0064337.1 MGP_NODShiLtJ_G0027859.1 mouse_genomes_project 4 8275388 8295546 + 2610301B20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0064338.1 MGP_NODShiLtJ_G0027859.1 mouse_genomes_project 4 8275428 8300149 + 2610301B20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0064339.1 MGP_NODShiLtJ_G0027859.1 mouse_genomes_project 4 8275431 8303484 + MGP_NODShiLtJ_P0064339 2610301B20Rik protein_coding protein_coding MGP_NODShiLtJ_T0064340.1 MGP_NODShiLtJ_G0027859.1 mouse_genomes_project 4 8282071 8290544 + 2610301B20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0067536.1 MGP_NODShiLtJ_G0028607.1 mouse_genomes_project 4 143575306 143581730 - Zscan20 protein_coding processed_transcript MGP_NODShiLtJ_T0067537.1 MGP_NODShiLtJ_G0028607.1 mouse_genomes_project 4 143575314 143602918 - MGP_NODShiLtJ_P0067537 Zscan20 protein_coding protein_coding MGP_NODShiLtJ_T0067538.1 MGP_NODShiLtJ_G0028607.1 mouse_genomes_project 4 143577142 143602862 - MGP_NODShiLtJ_P0067538 Zscan20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067539.1 MGP_NODShiLtJ_G0028607.1 mouse_genomes_project 4 143593239 143602854 - Zscan20 protein_coding retained_intron MGP_NODShiLtJ_T0067540.1 MGP_NODShiLtJ_G0028607.1 mouse_genomes_project 4 143596146 143602815 - MGP_NODShiLtJ_P0067540 Zscan20 protein_coding protein_coding MGP_NODShiLtJ_T0067541.1 MGP_NODShiLtJ_G0028607.1 mouse_genomes_project 4 143596180 143602801 - MGP_NODShiLtJ_P0067541 Zscan20 protein_coding protein_coding MGP_NODShiLtJ_T0066030.1 MGP_NODShiLtJ_G0028270.1 mouse_genomes_project 4 108856683 108924755 - MGP_NODShiLtJ_P0066030 Cyp2j11 protein_coding protein_coding MGP_NODShiLtJ_T0004535.1 MGP_NODShiLtJ_G0003932.1 mouse_genomes_project 4 166609637 166610906 + Ube4bos3 antisense antisense MGP_NODShiLtJ_T0068506.1 MGP_NODShiLtJ_G0028816.1 mouse_genomes_project 4 155081467 155112320 - MGP_NODShiLtJ_P0068506 Minos1 protein_coding protein_coding MGP_NODShiLtJ_T0068507.1 MGP_NODShiLtJ_G0028816.1 mouse_genomes_project 4 155083444 155085613 - Minos1 protein_coding processed_transcript MGP_NODShiLtJ_T0068508.1 MGP_NODShiLtJ_G0028816.1 mouse_genomes_project 4 155083476 155090897 - Minos1 protein_coding processed_transcript MGP_NODShiLtJ_T0068509.1 MGP_NODShiLtJ_G0028816.1 mouse_genomes_project 4 155083555 155112201 - Minos1 protein_coding processed_transcript MGP_NODShiLtJ_T0014313.1 MGP_NODShiLtJ_G0012421.1 mouse_genomes_project 4 17011985 17012207 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067114.1 MGP_NODShiLtJ_G0028500.1 mouse_genomes_project 4 133263072 133267474 + MGP_NODShiLtJ_P0067114 Cldn19 protein_coding protein_coding MGP_NODShiLtJ_T0067115.1 MGP_NODShiLtJ_G0028500.1 mouse_genomes_project 4 133263167 133270048 + MGP_NODShiLtJ_P0067115 Cldn19 protein_coding protein_coding MGP_NODShiLtJ_T0066663.1 MGP_NODShiLtJ_G0028398.1 mouse_genomes_project 4 128462583 128490744 - MGP_NODShiLtJ_P0066663 Cmpk1 protein_coding protein_coding MGP_NODShiLtJ_T0066664.1 MGP_NODShiLtJ_G0028398.1 mouse_genomes_project 4 128467173 128490652 - MGP_NODShiLtJ_P0066664 Cmpk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066665.1 MGP_NODShiLtJ_G0028398.1 mouse_genomes_project 4 128473104 128490575 - MGP_NODShiLtJ_P0066665 Cmpk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066666.1 MGP_NODShiLtJ_G0028398.1 mouse_genomes_project 4 128488320 128490652 - Cmpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0069499.1 MGP_NODShiLtJ_G0029035.1 mouse_genomes_project 4 173715890 173718338 + MGP_NODShiLtJ_P0069499 Mxra8 protein_coding protein_coding MGP_NODShiLtJ_T0069500.1 MGP_NODShiLtJ_G0029035.1 mouse_genomes_project 4 173715936 173720263 + MGP_NODShiLtJ_P0069500 Mxra8 protein_coding protein_coding MGP_NODShiLtJ_T0069501.1 MGP_NODShiLtJ_G0029035.1 mouse_genomes_project 4 173716040 173717489 + Mxra8 protein_coding retained_intron MGP_NODShiLtJ_T0069502.1 MGP_NODShiLtJ_G0029035.1 mouse_genomes_project 4 173718487 173719132 + Mxra8 protein_coding retained_intron MGP_NODShiLtJ_T0069503.1 MGP_NODShiLtJ_G0029035.1 mouse_genomes_project 4 173718608 173719632 + Mxra8 protein_coding retained_intron MGP_NODShiLtJ_T0069504.1 MGP_NODShiLtJ_G0029035.1 mouse_genomes_project 4 173718629 173719749 + Mxra8 protein_coding retained_intron MGP_NODShiLtJ_T0069505.1 MGP_NODShiLtJ_G0029035.1 mouse_genomes_project 4 173719080 173719940 + Mxra8 protein_coding processed_transcript MGP_NODShiLtJ_T0017930.1 MGP_NODShiLtJ_G0015434.1 mouse_genomes_project 4 128400614 128414255 + Foxd2os processed_transcript processed_transcript MGP_NODShiLtJ_T0017931.1 MGP_NODShiLtJ_G0015434.1 mouse_genomes_project 4 128400614 128413628 + Foxd2os processed_transcript processed_transcript MGP_NODShiLtJ_T0100535.1 MGP_NODShiLtJ_G0038929.1 mouse_genomes_project 4 53629715 53629840 + Gm23746 snoRNA snoRNA MGP_NODShiLtJ_T0069321.1 MGP_NODShiLtJ_G0029002.1 mouse_genomes_project 4 172463490 172464925 - MGP_NODShiLtJ_P0069321 Actrt2 protein_coding protein_coding MGP_NODShiLtJ_T0099299.1 MGP_NODShiLtJ_G0037693.1 mouse_genomes_project 4 133589135 133589242 + Rnu6-ps2 snRNA snRNA MGP_NODShiLtJ_T0004477.1 MGP_NODShiLtJ_G0003888.1 mouse_genomes_project 4 139785869 139788488 - Gm12932 antisense antisense MGP_NODShiLtJ_T0066515.1 MGP_NODShiLtJ_G0028369.1 mouse_genomes_project 4 122450820 122478764 + MGP_NODShiLtJ_P0066515 Txndc12 protein_coding protein_coding MGP_NODShiLtJ_T0066516.1 MGP_NODShiLtJ_G0028369.1 mouse_genomes_project 4 122450854 122463692 + Txndc12 protein_coding processed_transcript MGP_NODShiLtJ_T0066519.1 MGP_NODShiLtJ_G0028369.1 mouse_genomes_project 4 122474123 122475920 + Txndc12 protein_coding processed_transcript MGP_NODShiLtJ_T0069293.1 MGP_NODShiLtJ_G0028998.1 mouse_genomes_project 4 171931878 172046554 + MGP_NODShiLtJ_P0069293 Megf6 protein_coding protein_coding MGP_NODShiLtJ_T0069294.1 MGP_NODShiLtJ_G0028998.1 mouse_genomes_project 4 172005187 172042580 + MGP_NODShiLtJ_P0069294 Megf6 protein_coding protein_coding MGP_NODShiLtJ_T0069295.1 MGP_NODShiLtJ_G0028998.1 mouse_genomes_project 4 172018502 172021425 + Megf6 protein_coding retained_intron MGP_NODShiLtJ_T0069296.1 MGP_NODShiLtJ_G0028998.1 mouse_genomes_project 4 172035463 172046025 + Megf6 protein_coding processed_transcript MGP_NODShiLtJ_T0069297.1 MGP_NODShiLtJ_G0028998.1 mouse_genomes_project 4 172037019 172041379 + MGP_NODShiLtJ_P0069297 Megf6 protein_coding protein_coding MGP_NODShiLtJ_T0069298.1 MGP_NODShiLtJ_G0028998.1 mouse_genomes_project 4 172040634 172044969 + Megf6 protein_coding retained_intron MGP_NODShiLtJ_T0069299.1 MGP_NODShiLtJ_G0028998.1 mouse_genomes_project 4 172040729 172041885 + Megf6 protein_coding retained_intron MGP_NODShiLtJ_T0066142.1 MGP_NODShiLtJ_G0028299.1 mouse_genomes_project 4 114136471 114255686 - MGP_NODShiLtJ_P0066142 Jak1 protein_coding protein_coding MGP_NODShiLtJ_T0066143.1 MGP_NODShiLtJ_G0028299.1 mouse_genomes_project 4 114138353 114139224 - Jak1 protein_coding processed_transcript MGP_NODShiLtJ_T0066144.1 MGP_NODShiLtJ_G0028299.1 mouse_genomes_project 4 114164331 114170155 - Jak1 protein_coding processed_transcript MGP_NODShiLtJ_T0066145.1 MGP_NODShiLtJ_G0028299.1 mouse_genomes_project 4 114165759 114170180 - Jak1 protein_coding processed_transcript MGP_NODShiLtJ_T0066146.1 MGP_NODShiLtJ_G0028299.1 mouse_genomes_project 4 114166612 114255685 - Jak1 protein_coding processed_transcript MGP_NODShiLtJ_T0066147.1 MGP_NODShiLtJ_G0028299.1 mouse_genomes_project 4 114166652 114255627 - Jak1 protein_coding processed_transcript MGP_NODShiLtJ_T0066148.1 MGP_NODShiLtJ_G0028299.1 mouse_genomes_project 4 114176355 114255677 - MGP_NODShiLtJ_P0066148 Jak1 protein_coding protein_coding MGP_NODShiLtJ_T0066149.1 MGP_NODShiLtJ_G0028299.1 mouse_genomes_project 4 114182567 114255630 - Jak1 protein_coding processed_transcript MGP_NODShiLtJ_T0099321.1 MGP_NODShiLtJ_G0037715.1 mouse_genomes_project 4 161509266 161509432 - Gm25938 snRNA snRNA MGP_NODShiLtJ_T0007892.1 MGP_NODShiLtJ_G0006441.1 mouse_genomes_project 4 142765039 142766567 - 1700112K13Rik lincRNA lincRNA MGP_NODShiLtJ_T0064360.1 MGP_NODShiLtJ_G0027864.1 mouse_genomes_project 4 8662257 8720292 - MGP_NODShiLtJ_P0064360 Ints8 protein_coding protein_coding MGP_NODShiLtJ_T0064361.1 MGP_NODShiLtJ_G0027864.1 mouse_genomes_project 4 8666637 8676131 - Ints8 protein_coding processed_transcript MGP_NODShiLtJ_T0064362.1 MGP_NODShiLtJ_G0027864.1 mouse_genomes_project 4 8666637 8699638 - Ints8 protein_coding processed_transcript MGP_NODShiLtJ_T0064363.1 MGP_NODShiLtJ_G0027864.1 mouse_genomes_project 4 8666637 8675564 - Ints8 protein_coding processed_transcript MGP_NODShiLtJ_T0064364.1 MGP_NODShiLtJ_G0027864.1 mouse_genomes_project 4 8666637 8720292 - MGP_NODShiLtJ_P0064364 Ints8 protein_coding protein_coding MGP_NODShiLtJ_T0064365.1 MGP_NODShiLtJ_G0027864.1 mouse_genomes_project 4 8666637 8720292 - MGP_NODShiLtJ_P0064365 Ints8 protein_coding protein_coding MGP_NODShiLtJ_T0064366.1 MGP_NODShiLtJ_G0027864.1 mouse_genomes_project 4 8670977 8683921 - Ints8 protein_coding processed_transcript MGP_NODShiLtJ_T0064367.1 MGP_NODShiLtJ_G0027864.1 mouse_genomes_project 4 8696641 8700047 - Ints8 protein_coding processed_transcript MGP_NODShiLtJ_T0067234.1 MGP_NODShiLtJ_G0028530.1 mouse_genomes_project 4 135598992 135608884 - MGP_NODShiLtJ_P0067234 protein_coding protein_coding MGP_NODShiLtJ_T0069278.1 MGP_NODShiLtJ_G0028994.1 mouse_genomes_project 4 171770426 171789388 - MGP_NODShiLtJ_P0069278 Ccdc27 protein_coding protein_coding MGP_NODShiLtJ_T0011710.1 MGP_NODShiLtJ_G0009829.1 mouse_genomes_project 4 154805419 154808746 + MGP_NODShiLtJ_P0011710 Pla2g2a polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0011711.1 MGP_NODShiLtJ_G0009829.1 mouse_genomes_project 4 154805438 154807432 + Pla2g2a polymorphic_pseudogene processed_transcript MGP_NODShiLtJ_T0011712.1 MGP_NODShiLtJ_G0009829.1 mouse_genomes_project 4 154806821 154808749 + Pla2g2a polymorphic_pseudogene retained_intron MGP_NODShiLtJ_T0067339.1 MGP_NODShiLtJ_G0028558.1 mouse_genomes_project 4 139475840 139525214 + MGP_NODShiLtJ_P0067339 Mtf1 protein_coding protein_coding MGP_NODShiLtJ_T0067340.1 MGP_NODShiLtJ_G0028558.1 mouse_genomes_project 4 139476286 139525635 + MGP_NODShiLtJ_P0067340 Mtf1 protein_coding protein_coding MGP_NODShiLtJ_T0067341.1 MGP_NODShiLtJ_G0028558.1 mouse_genomes_project 4 139476286 139496138 + MGP_NODShiLtJ_P0067341 Mtf1 protein_coding protein_coding MGP_NODShiLtJ_T0067342.1 MGP_NODShiLtJ_G0028558.1 mouse_genomes_project 4 139476319 139479085 + Mtf1 protein_coding retained_intron MGP_NODShiLtJ_T0067343.1 MGP_NODShiLtJ_G0028558.1 mouse_genomes_project 4 139476415 139478447 + MGP_NODShiLtJ_P0067343 Mtf1 protein_coding protein_coding MGP_NODShiLtJ_T0004468.1 MGP_NODShiLtJ_G0003882.1 mouse_genomes_project 4 138198036 138200902 + Gm12925 antisense antisense MGP_NODShiLtJ_T0004469.1 MGP_NODShiLtJ_G0003882.1 mouse_genomes_project 4 138199621 138203382 + Gm12925 antisense antisense MGP_NODShiLtJ_T0004470.1 MGP_NODShiLtJ_G0003882.1 mouse_genomes_project 4 138199783 138203389 + Gm12925 antisense antisense MGP_NODShiLtJ_T0014575.1 MGP_NODShiLtJ_G0012683.1 mouse_genomes_project 4 120809462 120810478 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007727.1 MGP_NODShiLtJ_G0006311.1 mouse_genomes_project 4 283414 291731 + 2210414B05Rik lincRNA lincRNA MGP_NODShiLtJ_T0066703.1 MGP_NODShiLtJ_G0028412.1 mouse_genomes_project 4 129406197 129445777 + MGP_NODShiLtJ_P0066703 Efcab14 protein_coding protein_coding MGP_NODShiLtJ_T0066704.1 MGP_NODShiLtJ_G0028412.1 mouse_genomes_project 4 129406232 129428570 + Efcab14 protein_coding processed_transcript MGP_NODShiLtJ_T0066705.1 MGP_NODShiLtJ_G0028412.1 mouse_genomes_project 4 129406232 129440838 + MGP_NODShiLtJ_P0066705 Efcab14 protein_coding protein_coding MGP_NODShiLtJ_T0066706.1 MGP_NODShiLtJ_G0028412.1 mouse_genomes_project 4 129406233 129422390 + Efcab14 protein_coding processed_transcript MGP_NODShiLtJ_T0066707.1 MGP_NODShiLtJ_G0028412.1 mouse_genomes_project 4 129406526 129454524 + MGP_NODShiLtJ_P0066707 Efcab14 protein_coding protein_coding MGP_NODShiLtJ_T0066708.1 MGP_NODShiLtJ_G0028412.1 mouse_genomes_project 4 129406896 129445420 + MGP_NODShiLtJ_P0066708 Efcab14 protein_coding protein_coding MGP_NODShiLtJ_T0066709.1 MGP_NODShiLtJ_G0028412.1 mouse_genomes_project 4 129437632 129446530 + Efcab14 protein_coding processed_transcript MGP_NODShiLtJ_T0004374.1 MGP_NODShiLtJ_G0003810.1 mouse_genomes_project 4 30297920 30298700 - Gm11915 antisense antisense MGP_NODShiLtJ_T0068623.1 MGP_NODShiLtJ_G0028842.1 mouse_genomes_project 4 157295632 157327413 + MGP_NODShiLtJ_P0068623 Spata21 protein_coding protein_coding MGP_NODShiLtJ_T0068624.1 MGP_NODShiLtJ_G0028842.1 mouse_genomes_project 4 157317269 157326196 + Spata21 protein_coding retained_intron MGP_NODShiLtJ_T0099296.1 MGP_NODShiLtJ_G0037690.1 mouse_genomes_project 4 131023259 131023375 + Gm25099 snRNA snRNA MGP_NODShiLtJ_T0007888.1 MGP_NODShiLtJ_G0006438.1 mouse_genomes_project 4 142399223 142401244 + 4930471C06Rik lincRNA lincRNA MGP_NODShiLtJ_T0007889.1 MGP_NODShiLtJ_G0006438.1 mouse_genomes_project 4 142399309 142401244 + 4930471C06Rik lincRNA lincRNA MGP_NODShiLtJ_T0014375.1 MGP_NODShiLtJ_G0012483.1 mouse_genomes_project 4 38058033 38058601 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010497.1 MGP_NODShiLtJ_G0008630.1 mouse_genomes_project 4 91354483 91354579 + Gm27452 miRNA miRNA MGP_NODShiLtJ_T0068630.1 MGP_NODShiLtJ_G0028844.1 mouse_genomes_project 4 157365243 157426082 + MGP_NODShiLtJ_P0068630 Fbxo42 protein_coding protein_coding MGP_NODShiLtJ_T0068631.1 MGP_NODShiLtJ_G0028844.1 mouse_genomes_project 4 157365252 157417287 + Fbxo42 protein_coding processed_transcript MGP_NODShiLtJ_T0067174.1 MGP_NODShiLtJ_G0028512.1 mouse_genomes_project 4 134265640 134271778 + MGP_NODShiLtJ_P0067174 Edn2 protein_coding protein_coding MGP_NODShiLtJ_T0065477.1 MGP_NODShiLtJ_G0028129.1 mouse_genomes_project 4 63952798 63980076 - Txndc8 protein_coding processed_transcript MGP_NODShiLtJ_T0065478.1 MGP_NODShiLtJ_G0028129.1 mouse_genomes_project 4 63952798 63980175 - MGP_NODShiLtJ_P0065478 Txndc8 protein_coding protein_coding MGP_NODShiLtJ_T0065479.1 MGP_NODShiLtJ_G0028129.1 mouse_genomes_project 4 63952800 63969037 - MGP_NODShiLtJ_P0065479 Txndc8 protein_coding protein_coding MGP_NODShiLtJ_T0068852.1 MGP_NODShiLtJ_G0028920.1 mouse_genomes_project 4 165192264 165204430 - MGP_NODShiLtJ_P0068852 Agtrap protein_coding protein_coding MGP_NODShiLtJ_T0068853.1 MGP_NODShiLtJ_G0028920.1 mouse_genomes_project 4 165195756 165201241 - Agtrap protein_coding processed_transcript MGP_NODShiLtJ_T0068854.1 MGP_NODShiLtJ_G0028920.1 mouse_genomes_project 4 165199129 165204430 - Agtrap protein_coding retained_intron MGP_NODShiLtJ_T0065218.1 MGP_NODShiLtJ_G0028057.1 mouse_genomes_project 4 50437417 50516863 + MGP_NODShiLtJ_P0065218 Tdrd7 protein_coding protein_coding MGP_NODShiLtJ_T0065219.1 MGP_NODShiLtJ_G0028057.1 mouse_genomes_project 4 50444316 50516863 + MGP_NODShiLtJ_P0065219 Tdrd7 protein_coding protein_coding MGP_NODShiLtJ_T0065220.1 MGP_NODShiLtJ_G0028057.1 mouse_genomes_project 4 50444917 50463585 + Tdrd7 protein_coding processed_transcript MGP_NODShiLtJ_T0065221.1 MGP_NODShiLtJ_G0028057.1 mouse_genomes_project 4 50466125 50481555 + Tdrd7 protein_coding processed_transcript MGP_NODShiLtJ_T0065222.1 MGP_NODShiLtJ_G0028057.1 mouse_genomes_project 4 50505777 50516863 + Tdrd7 protein_coding processed_transcript MGP_NODShiLtJ_T0004398.1 MGP_NODShiLtJ_G0003829.1 mouse_genomes_project 4 57919602 57929178 - Smc2os antisense antisense MGP_NODShiLtJ_T0064240.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652014 656648 + MGP_NODShiLtJ_P0064240 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064241.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652014 656643 + MGP_NODShiLtJ_P0064241 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064242.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652016 656592 + MGP_NODShiLtJ_P0064242 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064243.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652040 656641 + MGP_NODShiLtJ_P0064243 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064244.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652040 656648 + MGP_NODShiLtJ_P0064244 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064245.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652040 664164 + MGP_NODShiLtJ_P0064245 Chchd7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064246.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652040 656648 + MGP_NODShiLtJ_P0064246 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064247.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652040 656170 + MGP_NODShiLtJ_P0064247 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064248.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652046 656624 + MGP_NODShiLtJ_P0064248 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064249.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652169 656526 + MGP_NODShiLtJ_P0064249 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064250.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652548 654539 + Chchd7 protein_coding retained_intron MGP_NODShiLtJ_T0064251.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 652626 656646 + MGP_NODShiLtJ_P0064251 Chchd7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064252.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 653973 656645 + MGP_NODShiLtJ_P0064252 Chchd7 protein_coding protein_coding MGP_NODShiLtJ_T0064253.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 656533 663329 + Chchd7 protein_coding processed_transcript MGP_NODShiLtJ_T0064254.1 MGP_NODShiLtJ_G0027842.1 mouse_genomes_project 4 659927 662990 + Chchd7 protein_coding retained_intron MGP_NODShiLtJ_T0014700.1 MGP_NODShiLtJ_G0012808.1 mouse_genomes_project 4 161536993 161537584 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067985.1 MGP_NODShiLtJ_G0028692.1 mouse_genomes_project 4 148498006 148507729 + Cd164l2 protein_coding processed_transcript MGP_NODShiLtJ_T0067986.1 MGP_NODShiLtJ_G0028692.1 mouse_genomes_project 4 148498625 148510499 + MGP_NODShiLtJ_P0067986 Cd164l2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067987.1 MGP_NODShiLtJ_G0028692.1 mouse_genomes_project 4 148506769 148510498 + MGP_NODShiLtJ_P0067987 Cd164l2 protein_coding protein_coding MGP_NODShiLtJ_T0067988.1 MGP_NODShiLtJ_G0028692.1 mouse_genomes_project 4 148507406 148510498 + Cd164l2 protein_coding processed_transcript MGP_NODShiLtJ_T0067989.1 MGP_NODShiLtJ_G0028692.1 mouse_genomes_project 4 148507492 148510185 + Cd164l2 protein_coding retained_intron MGP_NODShiLtJ_T0065936.1 MGP_NODShiLtJ_G0028246.1 mouse_genomes_project 4 99950001 99950562 + MGP_NODShiLtJ_P0065936 Ifna4 protein_coding protein_coding MGP_NODShiLtJ_T0014706.1 MGP_NODShiLtJ_G0012814.1 mouse_genomes_project 4 164959184 164959517 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099256.1 MGP_NODShiLtJ_G0037650.1 mouse_genomes_project 4 45106861 45106968 + Gm25637 snRNA snRNA MGP_NODShiLtJ_T0007912.1 MGP_NODShiLtJ_G0006455.1 mouse_genomes_project 4 146750277 146775584 - Gm12962 lincRNA lincRNA MGP_NODShiLtJ_T0007913.1 MGP_NODShiLtJ_G0006455.1 mouse_genomes_project 4 146750605 146781692 - Gm12962 lincRNA lincRNA MGP_NODShiLtJ_T0068593.1 MGP_NODShiLtJ_G0028838.1 mouse_genomes_project 4 157187449 157206801 + MGP_NODShiLtJ_P0068593 Atp13a2 protein_coding protein_coding MGP_NODShiLtJ_T0068594.1 MGP_NODShiLtJ_G0028838.1 mouse_genomes_project 4 157187476 157209034 + Atp13a2 protein_coding retained_intron MGP_NODShiLtJ_T0068595.1 MGP_NODShiLtJ_G0028838.1 mouse_genomes_project 4 157187566 157200092 + Atp13a2 protein_coding retained_intron MGP_NODShiLtJ_T0068596.1 MGP_NODShiLtJ_G0028838.1 mouse_genomes_project 4 157187643 157208782 + MGP_NODShiLtJ_P0068596 Atp13a2 protein_coding protein_coding MGP_NODShiLtJ_T0068597.1 MGP_NODShiLtJ_G0028838.1 mouse_genomes_project 4 157197525 157203647 + Atp13a2 protein_coding processed_transcript MGP_NODShiLtJ_T0068598.1 MGP_NODShiLtJ_G0028838.1 mouse_genomes_project 4 157198135 157202586 + Atp13a2 protein_coding processed_transcript MGP_NODShiLtJ_T0068599.1 MGP_NODShiLtJ_G0028838.1 mouse_genomes_project 4 157202423 157203803 + Atp13a2 protein_coding processed_transcript MGP_NODShiLtJ_T0068600.1 MGP_NODShiLtJ_G0028838.1 mouse_genomes_project 4 157206129 157208427 + Atp13a2 protein_coding retained_intron MGP_NODShiLtJ_T0007867.1 MGP_NODShiLtJ_G0006425.1 mouse_genomes_project 4 131346294 131350450 + Gm12827 lincRNA lincRNA MGP_NODShiLtJ_T0011458.1 MGP_NODShiLtJ_G0009591.1 mouse_genomes_project 4 60172371 60172613 + Gm25687 misc_RNA misc_RNA MGP_NODShiLtJ_T0004372.1 MGP_NODShiLtJ_G0003808.1 mouse_genomes_project 4 19677086 19681246 + Gm11872 antisense antisense MGP_NODShiLtJ_T0017917.1 MGP_NODShiLtJ_G0015424.1 mouse_genomes_project 4 107505050 107523482 - Gm12703 processed_transcript processed_transcript MGP_NODShiLtJ_T0099281.1 MGP_NODShiLtJ_G0037675.1 mouse_genomes_project 4 111180840 111180930 - Gm24960 snRNA snRNA MGP_NODShiLtJ_T0067328.1 MGP_NODShiLtJ_G0028556.1 mouse_genomes_project 4 139384367 139401716 + MGP_NODShiLtJ_P0067328 Sf3a3 protein_coding protein_coding MGP_NODShiLtJ_T0067329.1 MGP_NODShiLtJ_G0028556.1 mouse_genomes_project 4 139384474 139388295 + Sf3a3 protein_coding processed_transcript MGP_NODShiLtJ_T0067330.1 MGP_NODShiLtJ_G0028556.1 mouse_genomes_project 4 139391088 139392738 + Sf3a3 protein_coding processed_transcript MGP_NODShiLtJ_T0014618.1 MGP_NODShiLtJ_G0012726.1 mouse_genomes_project 4 133580261 133581218 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010549.1 MGP_NODShiLtJ_G0008682.1 mouse_genomes_project 4 166965312 166965376 - Mir7023 miRNA miRNA MGP_NODShiLtJ_T0065550.1 MGP_NODShiLtJ_G0028147.1 mouse_genomes_project 4 65962031 66066913 + MGP_NODShiLtJ_P0065550 Snx30 protein_coding protein_coding MGP_NODShiLtJ_T0065551.1 MGP_NODShiLtJ_G0028147.1 mouse_genomes_project 4 65962071 65990251 + Snx30 protein_coding processed_transcript MGP_NODShiLtJ_T0065552.1 MGP_NODShiLtJ_G0028147.1 mouse_genomes_project 4 66046863 66062701 + Snx30 protein_coding processed_transcript MGP_NODShiLtJ_T0065553.1 MGP_NODShiLtJ_G0028147.1 mouse_genomes_project 4 66046949 66056725 + Snx30 protein_coding processed_transcript MGP_NODShiLtJ_T0064442.1 MGP_NODShiLtJ_G0027886.1 mouse_genomes_project 4 13960710 13988258 + MGP_NODShiLtJ_P0064442 Calb1 protein_coding protein_coding MGP_NODShiLtJ_T0064443.1 MGP_NODShiLtJ_G0027886.1 mouse_genomes_project 4 13960712 13975863 + Calb1 protein_coding retained_intron MGP_NODShiLtJ_T0064444.1 MGP_NODShiLtJ_G0027886.1 mouse_genomes_project 4 13964701 13976158 + Calb1 protein_coding retained_intron MGP_NODShiLtJ_T0010489.1 MGP_NODShiLtJ_G0008622.1 mouse_genomes_project 4 49828899 49829012 - Gm25692 miRNA miRNA MGP_NODShiLtJ_T0069555.1 MGP_NODShiLtJ_G0029044.1 mouse_genomes_project 4 173873566 173876726 - MGP_NODShiLtJ_P0069555 B3galt6 protein_coding protein_coding MGP_NODShiLtJ_T0014287.1 MGP_NODShiLtJ_G0012395.1 mouse_genomes_project 4 9164883 9165736 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007742.1 MGP_NODShiLtJ_G0006321.1 mouse_genomes_project 4 9543302 9552872 - Gm11840 lincRNA lincRNA MGP_NODShiLtJ_T0069451.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173503859 173507162 - Mib2 protein_coding processed_transcript MGP_NODShiLtJ_T0069452.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173503864 173516276 - Mib2 protein_coding processed_transcript MGP_NODShiLtJ_T0069453.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173503864 173518363 - MGP_NODShiLtJ_P0069453 Mib2 protein_coding protein_coding MGP_NODShiLtJ_T0069454.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173503865 173505910 - Mib2 protein_coding processed_transcript MGP_NODShiLtJ_T0069455.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173505020 173505910 - Mib2 protein_coding processed_transcript MGP_NODShiLtJ_T0069456.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173506125 173508766 - MGP_NODShiLtJ_P0069456 Mib2 protein_coding protein_coding MGP_NODShiLtJ_T0069457.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173506806 173507522 - Mib2 protein_coding processed_transcript MGP_NODShiLtJ_T0069458.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173510502 173518362 - Mib2 protein_coding processed_transcript MGP_NODShiLtJ_T0069459.1 MGP_NODShiLtJ_G0029024.1 mouse_genomes_project 4 173516213 173518358 - Mib2 protein_coding processed_transcript MGP_NODShiLtJ_T0068158.1 MGP_NODShiLtJ_G0028731.1 mouse_genomes_project 4 149971596 149978569 + MGP_NODShiLtJ_P0068158 Stmn1 protein_coding protein_coding MGP_NODShiLtJ_T0068159.1 MGP_NODShiLtJ_G0028731.1 mouse_genomes_project 4 149971662 149973960 + Stmn1 protein_coding processed_transcript MGP_NODShiLtJ_T0068160.1 MGP_NODShiLtJ_G0028731.1 mouse_genomes_project 4 149971669 149976410 + MGP_NODShiLtJ_P0068160 Stmn1 protein_coding protein_coding MGP_NODShiLtJ_T0014710.1 MGP_NODShiLtJ_G0012818.1 mouse_genomes_project 4 165729138 165729959 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014433.1 MGP_NODShiLtJ_G0012541.1 mouse_genomes_project 4 59892482 59892689 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065077.1 MGP_NODShiLtJ_G0028031.1 mouse_genomes_project 4 48115443 48116400 - MGP_NODShiLtJ_P0065077 Olfr157 protein_coding protein_coding MGP_NODShiLtJ_T0067383.1 MGP_NODShiLtJ_G0028570.1 mouse_genomes_project 4 140223647 140447079 + MGP_NODShiLtJ_P0067383 Grik3 protein_coding protein_coding MGP_NODShiLtJ_T0068466.1 MGP_NODShiLtJ_G0028803.1 mouse_genomes_project 4 154514718 154593716 - MGP_NODShiLtJ_P0068466 Vwa5b1 protein_coding protein_coding MGP_NODShiLtJ_T0068467.1 MGP_NODShiLtJ_G0028803.1 mouse_genomes_project 4 154521518 154533481 - MGP_NODShiLtJ_P0068467 Vwa5b1 protein_coding protein_coding MGP_NODShiLtJ_T0068468.1 MGP_NODShiLtJ_G0028803.1 mouse_genomes_project 4 154534027 154593867 - MGP_NODShiLtJ_P0068468 Vwa5b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068469.1 MGP_NODShiLtJ_G0028803.1 mouse_genomes_project 4 154546696 154558849 - Vwa5b1 protein_coding processed_transcript MGP_NODShiLtJ_T0068470.1 MGP_NODShiLtJ_G0028803.1 mouse_genomes_project 4 154552462 154559318 - Vwa5b1 protein_coding processed_transcript MGP_NODShiLtJ_T0010475.1 MGP_NODShiLtJ_G0008608.1 mouse_genomes_project 4 22454078 22454181 + Gm24078 miRNA miRNA MGP_NODShiLtJ_T0068367.1 MGP_NODShiLtJ_G0028783.1 mouse_genomes_project 4 153051352 153093656 - MGP_NODShiLtJ_P0068367 Cdc42 protein_coding protein_coding MGP_NODShiLtJ_T0068368.1 MGP_NODShiLtJ_G0028783.1 mouse_genomes_project 4 153053418 153093635 - MGP_NODShiLtJ_P0068368 Cdc42 protein_coding protein_coding MGP_NODShiLtJ_T0014515.1 MGP_NODShiLtJ_G0012623.1 mouse_genomes_project 4 97313812 97314141 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067558.1 MGP_NODShiLtJ_G0028611.1 mouse_genomes_project 4 143775021 143812113 - MGP_NODShiLtJ_P0067558 Zfp362 protein_coding protein_coding MGP_NODShiLtJ_T0067559.1 MGP_NODShiLtJ_G0028611.1 mouse_genomes_project 4 143775037 143800936 - MGP_NODShiLtJ_P0067559 Zfp362 protein_coding protein_coding MGP_NODShiLtJ_T0067560.1 MGP_NODShiLtJ_G0028611.1 mouse_genomes_project 4 143779017 143812113 - MGP_NODShiLtJ_P0067560 Zfp362 protein_coding protein_coding MGP_NODShiLtJ_T0067561.1 MGP_NODShiLtJ_G0028611.1 mouse_genomes_project 4 143794161 143794933 - Zfp362 protein_coding processed_transcript MGP_NODShiLtJ_T0007729.1 MGP_NODShiLtJ_G0006313.1 mouse_genomes_project 4 2448967 2455440 - Gm11782 lincRNA lincRNA MGP_NODShiLtJ_T0099252.1 MGP_NODShiLtJ_G0037646.1 mouse_genomes_project 4 39731517 39731624 + Gm23314 snRNA snRNA MGP_NODShiLtJ_T0100573.1 MGP_NODShiLtJ_G0038967.1 mouse_genomes_project 4 130979443 130979522 - Snord55 snoRNA snoRNA MGP_NODShiLtJ_T0014440.1 MGP_NODShiLtJ_G0012548.1 mouse_genomes_project 4 61161391 61161776 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010496.1 MGP_NODShiLtJ_G0008629.1 mouse_genomes_project 4 86021367 86021444 - Gm23159 miRNA miRNA MGP_NODShiLtJ_T0066242.1 MGP_NODShiLtJ_G0028316.1 mouse_genomes_project 4 116826561 117408029 + Dab1 protein_coding processed_transcript MGP_NODShiLtJ_T0066243.1 MGP_NODShiLtJ_G0028316.1 mouse_genomes_project 4 116826867 117938665 + MGP_NODShiLtJ_P0066243 Dab1 protein_coding protein_coding MGP_NODShiLtJ_T0066244.1 MGP_NODShiLtJ_G0028316.1 mouse_genomes_project 4 117612707 117937779 + MGP_NODShiLtJ_P0066244 Dab1 protein_coding protein_coding MGP_NODShiLtJ_T0066245.1 MGP_NODShiLtJ_G0028316.1 mouse_genomes_project 4 117613184 118008306 + MGP_NODShiLtJ_P0066245 Dab1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066246.1 MGP_NODShiLtJ_G0028316.1 mouse_genomes_project 4 117613184 118011353 + MGP_NODShiLtJ_P0066246 Dab1 protein_coding protein_coding MGP_NODShiLtJ_T0066247.1 MGP_NODShiLtJ_G0028316.1 mouse_genomes_project 4 117760701 117938665 + MGP_NODShiLtJ_P0066247 Dab1 protein_coding protein_coding MGP_NODShiLtJ_T0066248.1 MGP_NODShiLtJ_G0028316.1 mouse_genomes_project 4 117844030 117937075 + Dab1 protein_coding processed_transcript MGP_NODShiLtJ_T0066249.1 MGP_NODShiLtJ_G0028316.1 mouse_genomes_project 4 117859294 117972745 + MGP_NODShiLtJ_P0066249 Dab1 protein_coding protein_coding MGP_NODShiLtJ_T0069565.1 MGP_NODShiLtJ_G0029047.1 mouse_genomes_project 4 173913882 173916614 + MGP_NODShiLtJ_P0069565 Tnfrsf18 protein_coding protein_coding MGP_NODShiLtJ_T0069566.1 MGP_NODShiLtJ_G0029047.1 mouse_genomes_project 4 173914050 173916610 + Tnfrsf18 protein_coding retained_intron MGP_NODShiLtJ_T0069567.1 MGP_NODShiLtJ_G0029047.1 mouse_genomes_project 4 173914060 173916610 + MGP_NODShiLtJ_P0069567 Tnfrsf18 protein_coding protein_coding MGP_NODShiLtJ_T0069568.1 MGP_NODShiLtJ_G0029047.1 mouse_genomes_project 4 173914060 173916610 + MGP_NODShiLtJ_P0069568 Tnfrsf18 protein_coding protein_coding MGP_NODShiLtJ_T0069569.1 MGP_NODShiLtJ_G0029047.1 mouse_genomes_project 4 173914096 173916090 + Tnfrsf18 protein_coding processed_transcript MGP_NODShiLtJ_T0069570.1 MGP_NODShiLtJ_G0029047.1 mouse_genomes_project 4 173916086 173916614 + Tnfrsf18 protein_coding processed_transcript MGP_NODShiLtJ_T0067930.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846636 147904519 + MGP_NODShiLtJ_P0067930 Eya3 protein_coding protein_coding MGP_NODShiLtJ_T0067931.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846695 147950792 + MGP_NODShiLtJ_P0067931 Eya3 protein_coding protein_coding MGP_NODShiLtJ_T0067932.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846705 147950789 + MGP_NODShiLtJ_P0067932 Eya3 protein_coding protein_coding MGP_NODShiLtJ_T0067933.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846707 147908719 + Eya3 protein_coding processed_transcript MGP_NODShiLtJ_T0067934.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846713 147902731 + Eya3 protein_coding processed_transcript MGP_NODShiLtJ_T0067935.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846725 147946590 + MGP_NODShiLtJ_P0067935 Eya3 protein_coding protein_coding MGP_NODShiLtJ_T0067936.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846728 147947369 + Eya3 protein_coding processed_transcript MGP_NODShiLtJ_T0067937.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846734 147948711 + Eya3 protein_coding processed_transcript MGP_NODShiLtJ_T0067938.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147846766 147904704 + Eya3 protein_coding processed_transcript MGP_NODShiLtJ_T0067939.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147866546 147948677 + Eya3 protein_coding processed_transcript MGP_NODShiLtJ_T0067940.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147910650 147923260 + Eya3 protein_coding processed_transcript MGP_NODShiLtJ_T0067941.1 MGP_NODShiLtJ_G0028680.1 mouse_genomes_project 4 147914032 147946880 + Eya3 protein_coding processed_transcript MGP_NODShiLtJ_T0017924.1 MGP_NODShiLtJ_G0015430.1 mouse_genomes_project 4 119636460 119687582 + Gm12724 processed_transcript processed_transcript MGP_NODShiLtJ_T0068372.1 MGP_NODShiLtJ_G0028786.1 mouse_genomes_project 4 153210182 153212332 + MGP_NODShiLtJ_P0068372 1700013G24Rik protein_coding protein_coding MGP_NODShiLtJ_T0068744.1 MGP_NODShiLtJ_G0028874.1 mouse_genomes_project 4 159883737 159892389 + MGP_NODShiLtJ_P0068744 Pramef8 protein_coding protein_coding MGP_NODShiLtJ_T0068745.1 MGP_NODShiLtJ_G0028874.1 mouse_genomes_project 4 159884283 159888140 + MGP_NODShiLtJ_P0068745 Pramef8 protein_coding protein_coding MGP_NODShiLtJ_T0068746.1 MGP_NODShiLtJ_G0028874.1 mouse_genomes_project 4 159884298 159892389 + MGP_NODShiLtJ_P0068746 Pramef8 protein_coding protein_coding MGP_NODShiLtJ_T0068747.1 MGP_NODShiLtJ_G0028874.1 mouse_genomes_project 4 159884320 159888966 + MGP_NODShiLtJ_P0068747 Pramef8 protein_coding protein_coding MGP_NODShiLtJ_T0068748.1 MGP_NODShiLtJ_G0028874.1 mouse_genomes_project 4 159884321 159885673 + Pramef8 protein_coding processed_transcript MGP_NODShiLtJ_T0065624.1 MGP_NODShiLtJ_G0028170.1 mouse_genomes_project 4 69635871 69642299 - Kif12 protein_coding processed_transcript MGP_NODShiLtJ_T0065625.1 MGP_NODShiLtJ_G0028170.1 mouse_genomes_project 4 69635874 69642384 - MGP_NODShiLtJ_P0065625 Kif12 protein_coding protein_coding MGP_NODShiLtJ_T0065626.1 MGP_NODShiLtJ_G0028170.1 mouse_genomes_project 4 69637714 69641035 - Kif12 protein_coding processed_transcript MGP_NODShiLtJ_T0065627.1 MGP_NODShiLtJ_G0028170.1 mouse_genomes_project 4 69637966 69641427 - Kif12 protein_coding processed_transcript MGP_NODShiLtJ_T0065628.1 MGP_NODShiLtJ_G0028170.1 mouse_genomes_project 4 69639644 69641983 - Kif12 protein_coding processed_transcript MGP_NODShiLtJ_T0068149.1 MGP_NODShiLtJ_G0028729.1 mouse_genomes_project 4 149854039 149873118 - MGP_NODShiLtJ_P0068149 Extl1 protein_coding protein_coding MGP_NODShiLtJ_T0068150.1 MGP_NODShiLtJ_G0028729.1 mouse_genomes_project 4 149859736 149887155 - Extl1 protein_coding processed_transcript MGP_NODShiLtJ_T0068151.1 MGP_NODShiLtJ_G0028729.1 mouse_genomes_project 4 149861872 149864584 - Extl1 protein_coding processed_transcript MGP_NODShiLtJ_T0065423.1 MGP_NODShiLtJ_G0028115.1 mouse_genomes_project 4 62630111 62631419 + MGP_NODShiLtJ_P0065423 Gm26657 protein_coding protein_coding MGP_NODShiLtJ_T0068009.1 MGP_NODShiLtJ_G0028697.1 mouse_genomes_project 4 148678206 148734843 + MGP_NODShiLtJ_P0068009 Slc9a1 protein_coding protein_coding MGP_NODShiLtJ_T0068010.1 MGP_NODShiLtJ_G0028697.1 mouse_genomes_project 4 148679144 148723437 + Slc9a1 protein_coding processed_transcript MGP_NODShiLtJ_T0068011.1 MGP_NODShiLtJ_G0028697.1 mouse_genomes_project 4 148727609 148731719 + Slc9a1 protein_coding processed_transcript MGP_NODShiLtJ_T0068012.1 MGP_NODShiLtJ_G0028697.1 mouse_genomes_project 4 148730650 148731335 + Slc9a1 protein_coding processed_transcript MGP_NODShiLtJ_T0068013.1 MGP_NODShiLtJ_G0028697.1 mouse_genomes_project 4 148731141 148733484 + Slc9a1 protein_coding processed_transcript MGP_NODShiLtJ_T0065072.1 MGP_NODShiLtJ_G0028027.1 mouse_genomes_project 4 47976440 47981063 - MGP_NODShiLtJ_P0065072 Olfr71 protein_coding protein_coding MGP_NODShiLtJ_T0065073.1 MGP_NODShiLtJ_G0028027.1 mouse_genomes_project 4 47976440 47977379 - MGP_NODShiLtJ_P0065073 Olfr71 protein_coding protein_coding MGP_NODShiLtJ_T0066202.1 MGP_NODShiLtJ_G0028309.1 mouse_genomes_project 4 116140139 116166124 + MGP_NODShiLtJ_P0066202 Tctex1d1 protein_coding protein_coding MGP_NODShiLtJ_T0066203.1 MGP_NODShiLtJ_G0028309.1 mouse_genomes_project 4 116146281 116166354 + MGP_NODShiLtJ_P0066203 Tctex1d1 protein_coding protein_coding MGP_NODShiLtJ_T0066204.1 MGP_NODShiLtJ_G0028309.1 mouse_genomes_project 4 116148475 116167374 + MGP_NODShiLtJ_P0066204 Tctex1d1 protein_coding protein_coding MGP_NODShiLtJ_T0066205.1 MGP_NODShiLtJ_G0028309.1 mouse_genomes_project 4 116151728 116152794 + Tctex1d1 protein_coding processed_transcript MGP_NODShiLtJ_T0069051.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167587979 167595545 + MGP_NODShiLtJ_P0069051 Eno1 protein_coding protein_coding MGP_NODShiLtJ_T0069052.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167588210 167599978 + MGP_NODShiLtJ_P0069052 Eno1 protein_coding protein_coding MGP_NODShiLtJ_T0069053.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167588498 167593984 + Eno1 protein_coding retained_intron MGP_NODShiLtJ_T0069054.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167588498 167596604 + MGP_NODShiLtJ_P0069054 Eno1 protein_coding protein_coding MGP_NODShiLtJ_T0069055.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167588501 167591203 + Eno1 protein_coding retained_intron MGP_NODShiLtJ_T0069056.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167588963 167593399 + MGP_NODShiLtJ_P0069056 Eno1 protein_coding protein_coding MGP_NODShiLtJ_T0069057.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167594741 167599939 + MGP_NODShiLtJ_P0069057 Eno1 protein_coding protein_coding MGP_NODShiLtJ_T0069058.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167595490 167598131 + Eno1 protein_coding retained_intron MGP_NODShiLtJ_T0069059.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167597649 167598796 + Eno1 protein_coding retained_intron MGP_NODShiLtJ_T0069060.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167598698 167599526 + Eno1 protein_coding retained_intron MGP_NODShiLtJ_T0069061.1 MGP_NODShiLtJ_G0028957.1 mouse_genomes_project 4 167598803 167599868 + Eno1 protein_coding retained_intron MGP_NODShiLtJ_T0068561.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156655698 156726924 - MGP_NODShiLtJ_P0068561 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0068562.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156655698 156719620 - MGP_NODShiLtJ_P0068562 Arhgef10l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068563.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156655698 156802075 - MGP_NODShiLtJ_P0068563 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0068564.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156655698 156802081 - MGP_NODShiLtJ_P0068564 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0068565.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156655698 156820579 - MGP_NODShiLtJ_P0068565 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0068566.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156655698 156802075 - MGP_NODShiLtJ_P0068566 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0068567.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156655698 156724344 - MGP_NODShiLtJ_P0068567 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0068568.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156685760 156710847 - MGP_NODShiLtJ_P0068568 Arhgef10l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068569.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156717953 156724328 - MGP_NODShiLtJ_P0068569 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0068570.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156723390 156734845 - Arhgef10l protein_coding retained_intron MGP_NODShiLtJ_T0068571.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156734736 156802685 - MGP_NODShiLtJ_P0068571 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0068572.1 MGP_NODShiLtJ_G0028830.1 mouse_genomes_project 4 156735973 156762676 - MGP_NODShiLtJ_P0068572 Arhgef10l protein_coding protein_coding MGP_NODShiLtJ_T0007937.1 MGP_NODShiLtJ_G0006470.1 mouse_genomes_project 4 153118978 153120095 - 2810405F17Rik lincRNA lincRNA MGP_NODShiLtJ_T0064855.1 MGP_NODShiLtJ_G0027995.1 mouse_genomes_project 4 46960940 46961605 - MGP_NODShiLtJ_P0064855 protein_coding protein_coding MGP_NODShiLtJ_T0014320.1 MGP_NODShiLtJ_G0012428.1 mouse_genomes_project 4 20494267 20495328 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004362.1 MGP_NODShiLtJ_G0003799.1 mouse_genomes_project 4 3685029 3701024 + Gm11802 antisense antisense MGP_NODShiLtJ_T0065092.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48331294 48394214 - MGP_NODShiLtJ_P0065092 Gne protein_coding protein_coding MGP_NODShiLtJ_T0065093.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48334029 48353247 - MGP_NODShiLtJ_P0065093 Gne protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065094.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48334045 48369878 - MGP_NODShiLtJ_P0065094 Gne protein_coding protein_coding MGP_NODShiLtJ_T0065095.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48334049 48362921 - MGP_NODShiLtJ_P0065095 Gne protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065096.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48334177 48362961 - MGP_NODShiLtJ_P0065096 Gne protein_coding protein_coding MGP_NODShiLtJ_T0065097.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48343137 48369724 - MGP_NODShiLtJ_P0065097 Gne protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065098.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48350823 48363062 - MGP_NODShiLtJ_P0065098 Gne protein_coding protein_coding MGP_NODShiLtJ_T0065099.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48353254 48361080 - Gne protein_coding retained_intron MGP_NODShiLtJ_T0065100.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48357652 48394204 - Gne protein_coding retained_intron MGP_NODShiLtJ_T0065101.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48357820 48393961 - MGP_NODShiLtJ_P0065101 Gne protein_coding protein_coding MGP_NODShiLtJ_T0065102.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48357924 48369836 - Gne protein_coding processed_transcript MGP_NODShiLtJ_T0065103.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48357943 48369702 - MGP_NODShiLtJ_P0065103 Gne protein_coding protein_coding MGP_NODShiLtJ_T0065104.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48358055 48370117 - MGP_NODShiLtJ_P0065104 Gne protein_coding protein_coding MGP_NODShiLtJ_T0065105.1 MGP_NODShiLtJ_G0028037.1 mouse_genomes_project 4 48358064 48370118 - MGP_NODShiLtJ_P0065105 Gne protein_coding protein_coding MGP_NODShiLtJ_T0098039.1 MGP_NODShiLtJ_G0036451.1 mouse_genomes_project 4 139496731 139496850 + n-R5s192 rRNA rRNA MGP_NODShiLtJ_T0068313.1 MGP_NODShiLtJ_G0028767.1 mouse_genomes_project 4 151887683 151913730 + Tcea3 protein_coding processed_transcript MGP_NODShiLtJ_T0068314.1 MGP_NODShiLtJ_G0028767.1 mouse_genomes_project 4 151887906 151917396 + MGP_NODShiLtJ_P0068314 Tcea3 protein_coding protein_coding MGP_NODShiLtJ_T0068315.1 MGP_NODShiLtJ_G0028767.1 mouse_genomes_project 4 151887927 151905787 + MGP_NODShiLtJ_P0068315 Tcea3 protein_coding protein_coding MGP_NODShiLtJ_T0014629.1 MGP_NODShiLtJ_G0012737.1 mouse_genomes_project 4 135848147 135848479 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067796.1 MGP_NODShiLtJ_G0028655.1 mouse_genomes_project 4 145517195 145550893 + MGP_NODShiLtJ_P0067796 Snrnp40 protein_coding protein_coding MGP_NODShiLtJ_T0067797.1 MGP_NODShiLtJ_G0028655.1 mouse_genomes_project 4 145517257 145536451 + Snrnp40 protein_coding processed_transcript MGP_NODShiLtJ_T0067798.1 MGP_NODShiLtJ_G0028655.1 mouse_genomes_project 4 145519690 145522496 + Snrnp40 protein_coding processed_transcript MGP_NODShiLtJ_T0067799.1 MGP_NODShiLtJ_G0028655.1 mouse_genomes_project 4 145545896 145549495 + Snrnp40 protein_coding processed_transcript MGP_NODShiLtJ_T0065424.1 MGP_NODShiLtJ_G0028116.1 mouse_genomes_project 4 62633454 62634967 + MGP_NODShiLtJ_P0065424 Actl7a protein_coding protein_coding MGP_NODShiLtJ_T0099283.1 MGP_NODShiLtJ_G0037677.1 mouse_genomes_project 4 114089617 114089680 - Gm22100 snRNA snRNA MGP_NODShiLtJ_T0014311.1 MGP_NODShiLtJ_G0012419.1 mouse_genomes_project 4 15646144 15646405 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065697.1 MGP_NODShiLtJ_G0028191.1 mouse_genomes_project 4 78045400 78166952 - MGP_NODShiLtJ_P0065697 Megf9 protein_coding protein_coding MGP_NODShiLtJ_T0065698.1 MGP_NODShiLtJ_G0028191.1 mouse_genomes_project 4 78085010 78167019 - MGP_NODShiLtJ_P0065698 Megf9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014693.1 MGP_NODShiLtJ_G0012801.1 mouse_genomes_project 4 159952697 159954720 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007818.1 MGP_NODShiLtJ_G0006387.1 mouse_genomes_project 4 95465925 95466742 + Gm12415 lincRNA lincRNA MGP_NODShiLtJ_T0100512.1 MGP_NODShiLtJ_G0038906.1 mouse_genomes_project 4 557530 557667 - Gm24125 snoRNA snoRNA MGP_NODShiLtJ_T0066608.1 MGP_NODShiLtJ_G0028385.1 mouse_genomes_project 4 125496642 125545289 + MGP_NODShiLtJ_P0066608 Bend5 protein_coding protein_coding MGP_NODShiLtJ_T0066609.1 MGP_NODShiLtJ_G0028385.1 mouse_genomes_project 4 125496683 125517710 + Bend5 protein_coding processed_transcript MGP_NODShiLtJ_T0066610.1 MGP_NODShiLtJ_G0028385.1 mouse_genomes_project 4 125496724 125544911 + Bend5 protein_coding processed_transcript MGP_NODShiLtJ_T0066611.1 MGP_NODShiLtJ_G0028385.1 mouse_genomes_project 4 125496843 125502179 + Bend5 protein_coding processed_transcript MGP_NODShiLtJ_T0066612.1 MGP_NODShiLtJ_G0028385.1 mouse_genomes_project 4 125517660 125545287 + MGP_NODShiLtJ_P0066612 Bend5 protein_coding protein_coding MGP_NODShiLtJ_T0066613.1 MGP_NODShiLtJ_G0028385.1 mouse_genomes_project 4 125517782 125544918 + Bend5 protein_coding processed_transcript MGP_NODShiLtJ_T0064722.1 MGP_NODShiLtJ_G0027957.1 mouse_genomes_project 4 44266313 44275186 - MGP_NODShiLtJ_P0064722 Ndufb6 protein_coding protein_coding MGP_NODShiLtJ_T0064723.1 MGP_NODShiLtJ_G0027957.1 mouse_genomes_project 4 44266387 44275174 - MGP_NODShiLtJ_P0064723 Ndufb6 protein_coding protein_coding MGP_NODShiLtJ_T0068175.1 MGP_NODShiLtJ_G0028735.1 mouse_genomes_project 4 150055004 150070846 - MGP_NODShiLtJ_P0068175 Sepn1 protein_coding protein_coding MGP_NODShiLtJ_T0068176.1 MGP_NODShiLtJ_G0028735.1 mouse_genomes_project 4 150056691 150058143 - Sepn1 protein_coding processed_transcript MGP_NODShiLtJ_T0014360.1 MGP_NODShiLtJ_G0012468.1 mouse_genomes_project 4 34430713 34431657 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011470.1 MGP_NODShiLtJ_G0009603.1 mouse_genomes_project 4 128491467 128491565 + Gm24045 misc_RNA misc_RNA MGP_NODShiLtJ_T0014648.1 MGP_NODShiLtJ_G0012756.1 mouse_genomes_project 4 141856630 141856795 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069556.1 MGP_NODShiLtJ_G0029045.1 mouse_genomes_project 4 173876897 173895669 + MGP_NODShiLtJ_P0069556 Sdf4 protein_coding protein_coding MGP_NODShiLtJ_T0069557.1 MGP_NODShiLtJ_G0029045.1 mouse_genomes_project 4 173876936 173899039 + MGP_NODShiLtJ_P0069557 Sdf4 protein_coding protein_coding MGP_NODShiLtJ_T0069558.1 MGP_NODShiLtJ_G0029045.1 mouse_genomes_project 4 173877195 173888194 + MGP_NODShiLtJ_P0069558 Sdf4 protein_coding protein_coding MGP_NODShiLtJ_T0069559.1 MGP_NODShiLtJ_G0029045.1 mouse_genomes_project 4 173877402 173895777 + MGP_NODShiLtJ_P0069559 Sdf4 protein_coding protein_coding MGP_NODShiLtJ_T0069560.1 MGP_NODShiLtJ_G0029045.1 mouse_genomes_project 4 173884931 173886464 + Sdf4 protein_coding retained_intron MGP_NODShiLtJ_T0069561.1 MGP_NODShiLtJ_G0029045.1 mouse_genomes_project 4 173893968 173895316 + Sdf4 protein_coding retained_intron MGP_NODShiLtJ_T0067452.1 MGP_NODShiLtJ_G0028585.1 mouse_genomes_project 4 141245902 141279399 - MGP_NODShiLtJ_P0067452 Ago1 protein_coding protein_coding MGP_NODShiLtJ_T0067453.1 MGP_NODShiLtJ_G0028585.1 mouse_genomes_project 4 141249211 141272575 - MGP_NODShiLtJ_P0067453 Ago1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067454.1 MGP_NODShiLtJ_G0028585.1 mouse_genomes_project 4 141250393 141270000 - MGP_NODShiLtJ_P0067454 Ago1 protein_coding protein_coding MGP_NODShiLtJ_T0067455.1 MGP_NODShiLtJ_G0028585.1 mouse_genomes_project 4 141253424 141254186 - Ago1 protein_coding retained_intron MGP_NODShiLtJ_T0067456.1 MGP_NODShiLtJ_G0028585.1 mouse_genomes_project 4 141270107 141270918 - Ago1 protein_coding retained_intron MGP_NODShiLtJ_T0064819.1 MGP_NODShiLtJ_G0027983.1 mouse_genomes_project 4 45857885 45866274 - MGP_NODShiLtJ_P0064819 Dctn3 protein_coding protein_coding MGP_NODShiLtJ_T0064820.1 MGP_NODShiLtJ_G0027983.1 mouse_genomes_project 4 45857885 45866267 - MGP_NODShiLtJ_P0064820 Dctn3 protein_coding protein_coding MGP_NODShiLtJ_T0064821.1 MGP_NODShiLtJ_G0027983.1 mouse_genomes_project 4 45862854 45866241 - Dctn3 protein_coding processed_transcript MGP_NODShiLtJ_T0014481.1 MGP_NODShiLtJ_G0012589.1 mouse_genomes_project 4 83259601 83260819 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065449.1 MGP_NODShiLtJ_G0028121.1 mouse_genomes_project 4 62865032 62901536 - MGP_NODShiLtJ_P0065449 Frrs1l protein_coding protein_coding MGP_NODShiLtJ_T0065450.1 MGP_NODShiLtJ_G0028121.1 mouse_genomes_project 4 62868059 62901281 - MGP_NODShiLtJ_P0065450 Frrs1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014664.1 MGP_NODShiLtJ_G0012772.1 mouse_genomes_project 4 148571953 148572408 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064815.1 MGP_NODShiLtJ_G0027981.1 mouse_genomes_project 4 45771015 45813246 - MGP_NODShiLtJ_P0064815 Cntfr protein_coding protein_coding MGP_NODShiLtJ_T0064816.1 MGP_NODShiLtJ_G0027981.1 mouse_genomes_project 4 45771015 45814861 - MGP_NODShiLtJ_P0064816 Cntfr protein_coding protein_coding MGP_NODShiLtJ_T0064817.1 MGP_NODShiLtJ_G0027981.1 mouse_genomes_project 4 45776749 45777516 - Cntfr protein_coding processed_transcript MGP_NODShiLtJ_T0017945.1 MGP_NODShiLtJ_G0015442.1 mouse_genomes_project 4 141124292 141125924 + Gm12945 processed_transcript processed_transcript MGP_NODShiLtJ_T0064814.1 MGP_NODShiLtJ_G0027980.1 mouse_genomes_project 4 45750476 45752657 - MGP_NODShiLtJ_P0064814 Enho protein_coding protein_coding MGP_NODShiLtJ_T0014594.1 MGP_NODShiLtJ_G0012702.1 mouse_genomes_project 4 129005709 129006082 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004530.1 MGP_NODShiLtJ_G0003929.1 mouse_genomes_project 4 166122596 166123411 - Gm15969 antisense antisense MGP_NODShiLtJ_T0066685.1 MGP_NODShiLtJ_G0028402.1 mouse_genomes_project 4 128618181 128653095 - MGP_NODShiLtJ_P0066685 Cyp4x1 protein_coding protein_coding MGP_NODShiLtJ_T0014591.1 MGP_NODShiLtJ_G0012699.1 mouse_genomes_project 4 125920845 125921895 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007959.1 MGP_NODShiLtJ_G0006491.1 mouse_genomes_project 4 167458640 167464027 - Gm13093 lincRNA lincRNA MGP_NODShiLtJ_T0066928.1 MGP_NODShiLtJ_G0028455.1 mouse_genomes_project 4 131087796 131108050 + MGP_NODShiLtJ_P0066928 Tmem53 protein_coding protein_coding MGP_NODShiLtJ_T0066929.1 MGP_NODShiLtJ_G0028455.1 mouse_genomes_project 4 131087885 131107984 + MGP_NODShiLtJ_P0066929 Tmem53 protein_coding protein_coding MGP_NODShiLtJ_T0066930.1 MGP_NODShiLtJ_G0028455.1 mouse_genomes_project 4 131087887 131108052 + MGP_NODShiLtJ_P0066930 Tmem53 protein_coding protein_coding MGP_NODShiLtJ_T0066931.1 MGP_NODShiLtJ_G0028455.1 mouse_genomes_project 4 131087907 131107366 + Tmem53 protein_coding processed_transcript MGP_NODShiLtJ_T0066932.1 MGP_NODShiLtJ_G0028455.1 mouse_genomes_project 4 131088185 131108050 + MGP_NODShiLtJ_P0066932 Tmem53 protein_coding protein_coding MGP_NODShiLtJ_T0066933.1 MGP_NODShiLtJ_G0028455.1 mouse_genomes_project 4 131104840 131108052 + Tmem53 protein_coding processed_transcript MGP_NODShiLtJ_T0064450.1 MGP_NODShiLtJ_G0027889.1 mouse_genomes_project 4 14089130 14105854 - MGP_NODShiLtJ_P0064450 Osgin2 protein_coding protein_coding MGP_NODShiLtJ_T0064451.1 MGP_NODShiLtJ_G0027889.1 mouse_genomes_project 4 14089236 14094089 - Osgin2 protein_coding processed_transcript MGP_NODShiLtJ_T0064452.1 MGP_NODShiLtJ_G0027889.1 mouse_genomes_project 4 14093931 14105762 - MGP_NODShiLtJ_P0064452 Osgin2 protein_coding protein_coding MGP_NODShiLtJ_T0064453.1 MGP_NODShiLtJ_G0027889.1 mouse_genomes_project 4 14094511 14105787 - Osgin2 protein_coding processed_transcript MGP_NODShiLtJ_T0064454.1 MGP_NODShiLtJ_G0027889.1 mouse_genomes_project 4 14096856 14098371 - Osgin2 protein_coding processed_transcript MGP_NODShiLtJ_T0007792.1 MGP_NODShiLtJ_G0006365.1 mouse_genomes_project 4 63291968 63295357 - 1700042G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0007793.1 MGP_NODShiLtJ_G0006365.1 mouse_genomes_project 4 63292292 63295376 - 1700042G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0007794.1 MGP_NODShiLtJ_G0006365.1 mouse_genomes_project 4 63292394 63295336 - 1700042G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0068785.1 MGP_NODShiLtJ_G0028897.1 mouse_genomes_project 4 161153554 161153863 - MGP_NODShiLtJ_P0068785 Gm9944 protein_coding protein_coding MGP_NODShiLtJ_T0068203.1 MGP_NODShiLtJ_G0028743.1 mouse_genomes_project 4 150676602 150736265 + MGP_NODShiLtJ_P0068203 Runx3 protein_coding protein_coding MGP_NODShiLtJ_T0068204.1 MGP_NODShiLtJ_G0028743.1 mouse_genomes_project 4 150708405 150734494 + MGP_NODShiLtJ_P0068204 Runx3 protein_coding protein_coding MGP_NODShiLtJ_T0068205.1 MGP_NODShiLtJ_G0028743.1 mouse_genomes_project 4 150708786 150711434 + Runx3 protein_coding retained_intron MGP_NODShiLtJ_T0068206.1 MGP_NODShiLtJ_G0028743.1 mouse_genomes_project 4 150709008 150711196 + Runx3 protein_coding processed_transcript MGP_NODShiLtJ_T0068207.1 MGP_NODShiLtJ_G0028743.1 mouse_genomes_project 4 150709353 150711251 + Runx3 protein_coding processed_transcript MGP_NODShiLtJ_T0068208.1 MGP_NODShiLtJ_G0028743.1 mouse_genomes_project 4 150710260 150711167 + Runx3 protein_coding processed_transcript MGP_NODShiLtJ_T0004412.1 MGP_NODShiLtJ_G0003843.1 mouse_genomes_project 4 97433001 97434360 + Saxo1os antisense antisense MGP_NODShiLtJ_T0065916.1 MGP_NODShiLtJ_G0028230.1 mouse_genomes_project 4 99590395 99591145 - MGP_NODShiLtJ_P0065916 Ifnb1 protein_coding protein_coding MGP_NODShiLtJ_T0004476.1 MGP_NODShiLtJ_G0003887.1 mouse_genomes_project 4 139648796 139682143 - Gm12930 antisense antisense MGP_NODShiLtJ_T0014661.1 MGP_NODShiLtJ_G0012769.1 mouse_genomes_project 4 147390674 147390995 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014489.1 MGP_NODShiLtJ_G0012597.1 mouse_genomes_project 4 85317684 85318623 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014655.1 MGP_NODShiLtJ_G0012763.1 mouse_genomes_project 4 144856422 144856711 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001380.1 MGP_NODShiLtJ_G0001300.1 mouse_genomes_project 4 49020152 49021729 + TEC TEC MGP_NODShiLtJ_T0066328.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120532906 120544167 + Cyb5rl protein_coding retained_intron MGP_NODShiLtJ_T0066329.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120532906 120551696 + MGP_NODShiLtJ_P0066329 Cyb5rl protein_coding protein_coding MGP_NODShiLtJ_T0066330.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120532914 120553431 + MGP_NODShiLtJ_P0066330 Cyb5rl protein_coding protein_coding MGP_NODShiLtJ_T0066331.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120532914 120536834 + MGP_NODShiLtJ_P0066331 Cyb5rl protein_coding protein_coding MGP_NODShiLtJ_T0066332.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120532937 120554138 + MGP_NODShiLtJ_P0066332 Cyb5rl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066333.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120532942 120536850 + MGP_NODShiLtJ_P0066333 Cyb5rl protein_coding protein_coding MGP_NODShiLtJ_T0066334.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120534523 120551696 + MGP_NODShiLtJ_P0066334 Cyb5rl protein_coding protein_coding MGP_NODShiLtJ_T0066335.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120534561 120553861 + MGP_NODShiLtJ_P0066335 Cyb5rl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066336.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120536086 120550674 + MGP_NODShiLtJ_P0066336 Cyb5rl protein_coding protein_coding MGP_NODShiLtJ_T0066337.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120536788 120550209 + MGP_NODShiLtJ_P0066337 Cyb5rl protein_coding protein_coding MGP_NODShiLtJ_T0066338.1 MGP_NODShiLtJ_G0028337.1 mouse_genomes_project 4 120546906 120553647 + MGP_NODShiLtJ_P0066338 Cyb5rl protein_coding protein_coding MGP_NODShiLtJ_T0014548.1 MGP_NODShiLtJ_G0012656.1 mouse_genomes_project 4 112330153 112330367 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010477.1 MGP_NODShiLtJ_G0008610.1 mouse_genomes_project 4 26235649 26235759 - Gm26067 miRNA miRNA MGP_NODShiLtJ_T0066638.1 MGP_NODShiLtJ_G0028388.1 mouse_genomes_project 4 126055678 126069009 + Skint8 protein_coding processed_transcript MGP_NODShiLtJ_T0066639.1 MGP_NODShiLtJ_G0028388.1 mouse_genomes_project 4 126055779 126075524 + Skint8 protein_coding retained_intron MGP_NODShiLtJ_T0066640.1 MGP_NODShiLtJ_G0028388.1 mouse_genomes_project 4 126055843 126092389 + MGP_NODShiLtJ_P0066640 Skint8 protein_coding protein_coding MGP_NODShiLtJ_T0066644.1 MGP_NODShiLtJ_G0028388.1 mouse_genomes_project 4 126065400 126069157 + Skint8 protein_coding processed_transcript MGP_NODShiLtJ_T0004556.1 MGP_NODShiLtJ_G0003949.1 mouse_genomes_project 4 172839791 172843169 + Gm10564 antisense antisense MGP_NODShiLtJ_T0069599.1 MGP_NODShiLtJ_G0029055.1 mouse_genomes_project 4 174125049 174132049 - MGP_NODShiLtJ_P0069599 Klhl17 protein_coding protein_coding MGP_NODShiLtJ_T0067637.1 MGP_NODShiLtJ_G0028627.1 mouse_genomes_project 4 144541749 144569563 + MGP_NODShiLtJ_P0067637 Bsdc1 protein_coding protein_coding MGP_NODShiLtJ_T0067638.1 MGP_NODShiLtJ_G0028627.1 mouse_genomes_project 4 144541840 144547164 + Bsdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067639.1 MGP_NODShiLtJ_G0028627.1 mouse_genomes_project 4 144541852 144550348 + Bsdc1 protein_coding retained_intron MGP_NODShiLtJ_T0067640.1 MGP_NODShiLtJ_G0028627.1 mouse_genomes_project 4 144541852 144547152 + Bsdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067641.1 MGP_NODShiLtJ_G0028627.1 mouse_genomes_project 4 144541855 144546135 + Bsdc1 protein_coding retained_intron MGP_NODShiLtJ_T0067642.1 MGP_NODShiLtJ_G0028627.1 mouse_genomes_project 4 144542004 144547164 + MGP_NODShiLtJ_P0067642 Bsdc1 protein_coding protein_coding MGP_NODShiLtJ_T0067643.1 MGP_NODShiLtJ_G0028627.1 mouse_genomes_project 4 144544716 144545714 + Bsdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067644.1 MGP_NODShiLtJ_G0028627.1 mouse_genomes_project 4 144552029 144554069 + Bsdc1 protein_coding retained_intron MGP_NODShiLtJ_T0067162.1 MGP_NODShiLtJ_G0028509.1 mouse_genomes_project 4 133718595 133720369 + MGP_NODShiLtJ_P0067162 Guca2a protein_coding protein_coding MGP_NODShiLtJ_T0069185.1 MGP_NODShiLtJ_G0028980.1 mouse_genomes_project 4 169838318 169849423 + MGP_NODShiLtJ_P0069185 Gpr153 protein_coding protein_coding MGP_NODShiLtJ_T0069186.1 MGP_NODShiLtJ_G0028980.1 mouse_genomes_project 4 169838448 169849423 + MGP_NODShiLtJ_P0069186 Gpr153 protein_coding protein_coding MGP_NODShiLtJ_T0069187.1 MGP_NODShiLtJ_G0028980.1 mouse_genomes_project 4 169843098 169849423 + MGP_NODShiLtJ_P0069187 Gpr153 protein_coding protein_coding MGP_NODShiLtJ_T0069188.1 MGP_NODShiLtJ_G0028980.1 mouse_genomes_project 4 169846455 169849422 + Gpr153 protein_coding processed_transcript MGP_NODShiLtJ_T0067958.1 MGP_NODShiLtJ_G0028686.1 mouse_genomes_project 4 148102903 148134948 - MGP_NODShiLtJ_P0067958 Stx12 protein_coding protein_coding MGP_NODShiLtJ_T0067959.1 MGP_NODShiLtJ_G0028686.1 mouse_genomes_project 4 148106448 148113943 - Stx12 protein_coding processed_transcript MGP_NODShiLtJ_T0069062.1 MGP_NODShiLtJ_G0028958.1 mouse_genomes_project 4 167639765 168016190 + MGP_NODShiLtJ_P0069062 Rere protein_coding protein_coding MGP_NODShiLtJ_T0069063.1 MGP_NODShiLtJ_G0028958.1 mouse_genomes_project 4 167639931 167640586 + Rere protein_coding processed_transcript MGP_NODShiLtJ_T0069064.1 MGP_NODShiLtJ_G0028958.1 mouse_genomes_project 4 167771227 168013714 + MGP_NODShiLtJ_P0069064 Rere protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069065.1 MGP_NODShiLtJ_G0028958.1 mouse_genomes_project 4 167779887 167846959 + MGP_NODShiLtJ_P0069065 Rere protein_coding protein_coding MGP_NODShiLtJ_T0069066.1 MGP_NODShiLtJ_G0028958.1 mouse_genomes_project 4 167868907 168016186 + MGP_NODShiLtJ_P0069066 Rere protein_coding protein_coding MGP_NODShiLtJ_T0069067.1 MGP_NODShiLtJ_G0028958.1 mouse_genomes_project 4 167959828 167960741 + Rere protein_coding processed_transcript MGP_NODShiLtJ_T0069068.1 MGP_NODShiLtJ_G0028958.1 mouse_genomes_project 4 167959897 168006288 + Rere protein_coding processed_transcript MGP_NODShiLtJ_T0069069.1 MGP_NODShiLtJ_G0028958.1 mouse_genomes_project 4 168011490 168014053 + MGP_NODShiLtJ_P0069069 Rere protein_coding protein_coding MGP_NODShiLtJ_T0010495.1 MGP_NODShiLtJ_G0008628.1 mouse_genomes_project 4 74738451 74738528 + Gm44497 miRNA miRNA MGP_NODShiLtJ_T0065861.1 MGP_NODShiLtJ_G0028220.1 mouse_genomes_project 4 97450214 97451832 + MGP_NODShiLtJ_P0065861 Rraga protein_coding protein_coding MGP_NODShiLtJ_T0017933.1 MGP_NODShiLtJ_G0015436.1 mouse_genomes_project 4 131043522 131043971 - 1700012C08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0066891.1 MGP_NODShiLtJ_G0028448.1 mouse_genomes_project 4 130900566 130921869 + MGP_NODShiLtJ_P0066891 Ptch2 protein_coding protein_coding MGP_NODShiLtJ_T0066892.1 MGP_NODShiLtJ_G0028448.1 mouse_genomes_project 4 130900587 130921869 + MGP_NODShiLtJ_P0066892 Ptch2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066893.1 MGP_NODShiLtJ_G0028448.1 mouse_genomes_project 4 130909415 130910790 + Ptch2 protein_coding retained_intron MGP_NODShiLtJ_T0066894.1 MGP_NODShiLtJ_G0028448.1 mouse_genomes_project 4 130909733 130912938 + MGP_NODShiLtJ_P0066894 Ptch2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066895.1 MGP_NODShiLtJ_G0028448.1 mouse_genomes_project 4 130914658 130915512 + Ptch2 protein_coding retained_intron MGP_NODShiLtJ_T0066896.1 MGP_NODShiLtJ_G0028448.1 mouse_genomes_project 4 130919909 130922587 + Ptch2 protein_coding retained_intron MGP_NODShiLtJ_T0069036.1 MGP_NODShiLtJ_G0028952.1 mouse_genomes_project 4 167309135 167333893 - MGP_NODShiLtJ_P0069036 H6pd protein_coding protein_coding MGP_NODShiLtJ_T0069037.1 MGP_NODShiLtJ_G0028952.1 mouse_genomes_project 4 167309135 167341672 - MGP_NODShiLtJ_P0069037 H6pd protein_coding protein_coding MGP_NODShiLtJ_T0069038.1 MGP_NODShiLtJ_G0028952.1 mouse_genomes_project 4 167326619 167332028 - MGP_NODShiLtJ_P0069038 H6pd protein_coding protein_coding MGP_NODShiLtJ_T0069039.1 MGP_NODShiLtJ_G0028952.1 mouse_genomes_project 4 167330547 167332053 - H6pd protein_coding processed_transcript MGP_NODShiLtJ_T0068366.1 MGP_NODShiLtJ_G0028782.1 mouse_genomes_project 4 153005413 153031406 + MGP_NODShiLtJ_P0068366 Wnt4 protein_coding protein_coding MGP_NODShiLtJ_T0067036.1 MGP_NODShiLtJ_G0028473.1 mouse_genomes_project 4 132337756 132342262 + MGP_NODShiLtJ_P0067036 Elovl1 protein_coding protein_coding MGP_NODShiLtJ_T0067037.1 MGP_NODShiLtJ_G0028473.1 mouse_genomes_project 4 132337771 132338472 + Elovl1 protein_coding processed_transcript MGP_NODShiLtJ_T0067038.1 MGP_NODShiLtJ_G0028473.1 mouse_genomes_project 4 132337815 132341589 + Elovl1 protein_coding processed_transcript MGP_NODShiLtJ_T0067039.1 MGP_NODShiLtJ_G0028473.1 mouse_genomes_project 4 132337849 132340716 + Elovl1 protein_coding processed_transcript MGP_NODShiLtJ_T0064788.1 MGP_NODShiLtJ_G0027974.1 mouse_genomes_project 4 45494251 45568537 - MGP_NODShiLtJ_P0064788 Kif24 protein_coding protein_coding MGP_NODShiLtJ_T0064789.1 MGP_NODShiLtJ_G0027974.1 mouse_genomes_project 4 45495117 45568545 - MGP_NODShiLtJ_P0064789 Kif24 protein_coding protein_coding MGP_NODShiLtJ_T0064790.1 MGP_NODShiLtJ_G0027974.1 mouse_genomes_project 4 45498691 45516780 - Kif24 protein_coding processed_transcript MGP_NODShiLtJ_T0064791.1 MGP_NODShiLtJ_G0027974.1 mouse_genomes_project 4 45508352 45509838 - Kif24 protein_coding processed_transcript MGP_NODShiLtJ_T0064792.1 MGP_NODShiLtJ_G0027974.1 mouse_genomes_project 4 45521828 45568537 - Kif24 protein_coding processed_transcript MGP_NODShiLtJ_T0064793.1 MGP_NODShiLtJ_G0027974.1 mouse_genomes_project 4 45537175 45568543 - MGP_NODShiLtJ_P0064793 Kif24 protein_coding protein_coding MGP_NODShiLtJ_T0064794.1 MGP_NODShiLtJ_G0027974.1 mouse_genomes_project 4 45555879 45568543 - Kif24 protein_coding processed_transcript MGP_NODShiLtJ_T0014510.1 MGP_NODShiLtJ_G0012618.1 mouse_genomes_project 4 95418397 95419445 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101937.1 MGP_NODShiLtJ_G0040105.1 mouse_genomes_project 4 155360189 155361340 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014684.1 MGP_NODShiLtJ_G0012792.1 mouse_genomes_project 4 153127011 153127389 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011462.1 MGP_NODShiLtJ_G0009595.1 mouse_genomes_project 4 96745783 96746060 + Gm26069 misc_RNA misc_RNA MGP_NODShiLtJ_T0014382.1 MGP_NODShiLtJ_G0012490.1 mouse_genomes_project 4 41786020 41787309 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100511.1 MGP_NODShiLtJ_G0038905.1 mouse_genomes_project 4 527050 527118 - Gm24016 snoRNA snoRNA MGP_NODShiLtJ_T0068552.1 MGP_NODShiLtJ_G0028825.1 mouse_genomes_project 4 155657359 155685507 + MGP_NODShiLtJ_P0068552 Aldh4a1 protein_coding protein_coding MGP_NODShiLtJ_T0068553.1 MGP_NODShiLtJ_G0028825.1 mouse_genomes_project 4 155657387 155685504 + Aldh4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0068554.1 MGP_NODShiLtJ_G0028825.1 mouse_genomes_project 4 155657602 155670244 + Aldh4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0065379.1 MGP_NODShiLtJ_G0028102.1 mouse_genomes_project 4 58549967 58550912 + MGP_NODShiLtJ_P0065379 Olfr270 protein_coding protein_coding MGP_NODShiLtJ_T0065380.1 MGP_NODShiLtJ_G0028102.1 mouse_genomes_project 4 58549973 58550912 + MGP_NODShiLtJ_P0065380 Olfr270 protein_coding protein_coding MGP_NODShiLtJ_T0066958.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131704240 131713649 + MGP_NODShiLtJ_P0066958 Slc6a9 protein_coding protein_coding MGP_NODShiLtJ_T0066959.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131704578 131746902 + MGP_NODShiLtJ_P0066959 Slc6a9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066960.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131704598 131740951 + MGP_NODShiLtJ_P0066960 Slc6a9 protein_coding protein_coding MGP_NODShiLtJ_T0066961.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131704683 131727731 + Slc6a9 protein_coding processed_transcript MGP_NODShiLtJ_T0066962.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131719733 131735661 + MGP_NODShiLtJ_P0066962 Slc6a9 protein_coding protein_coding MGP_NODShiLtJ_T0066963.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131719739 131735661 + MGP_NODShiLtJ_P0066963 Slc6a9 protein_coding protein_coding MGP_NODShiLtJ_T0066964.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131719910 131740079 + MGP_NODShiLtJ_P0066964 Slc6a9 protein_coding protein_coding MGP_NODShiLtJ_T0066965.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131726037 131727987 + MGP_NODShiLtJ_P0066965 Slc6a9 protein_coding protein_coding MGP_NODShiLtJ_T0066966.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131726089 131726573 + Slc6a9 protein_coding processed_transcript MGP_NODShiLtJ_T0066980.1 MGP_NODShiLtJ_G0028461.1 mouse_genomes_project 4 131745791 131746904 + Slc6a9 protein_coding retained_intron MGP_NODShiLtJ_T0099251.1 MGP_NODShiLtJ_G0037645.1 mouse_genomes_project 4 36542320 36542428 + Gm25623 snRNA snRNA MGP_NODShiLtJ_T0068310.1 MGP_NODShiLtJ_G0028765.1 mouse_genomes_project 4 151801165 151824994 + MGP_NODShiLtJ_P0068310 E2f2 protein_coding protein_coding MGP_NODShiLtJ_T0068311.1 MGP_NODShiLtJ_G0028765.1 mouse_genomes_project 4 151809534 151815569 + E2f2 protein_coding processed_transcript MGP_NODShiLtJ_T0014348.1 MGP_NODShiLtJ_G0012456.1 mouse_genomes_project 4 29917840 29918187 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069131.1 MGP_NODShiLtJ_G0028970.1 mouse_genomes_project 4 169528215 169534841 - MGP_NODShiLtJ_P0069131 Phf13 protein_coding protein_coding MGP_NODShiLtJ_T0100556.1 MGP_NODShiLtJ_G0038950.1 mouse_genomes_project 4 83988277 83988407 - Gm22864 snoRNA snoRNA MGP_NODShiLtJ_T0007850.1 MGP_NODShiLtJ_G0006413.1 mouse_genomes_project 4 119688820 119689807 + Gm12730 lincRNA lincRNA MGP_NODShiLtJ_T0101938.1 MGP_NODShiLtJ_G0040106.1 mouse_genomes_project 4 159870386 159871456 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0067845.1 MGP_NODShiLtJ_G0028663.1 mouse_genomes_project 4 146989807 147018785 + MGP_NODShiLtJ_P0067845 Srsf4 protein_coding protein_coding MGP_NODShiLtJ_T0067846.1 MGP_NODShiLtJ_G0028663.1 mouse_genomes_project 4 146990006 147008335 + MGP_NODShiLtJ_P0067846 Srsf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067847.1 MGP_NODShiLtJ_G0028663.1 mouse_genomes_project 4 147000485 147014087 + MGP_NODShiLtJ_P0067847 Srsf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067848.1 MGP_NODShiLtJ_G0028663.1 mouse_genomes_project 4 147001398 147018785 + Srsf4 protein_coding retained_intron MGP_NODShiLtJ_T0067849.1 MGP_NODShiLtJ_G0028663.1 mouse_genomes_project 4 147002373 147018786 + MGP_NODShiLtJ_P0067849 Srsf4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064682.1 MGP_NODShiLtJ_G0027947.1 mouse_genomes_project 4 37438394 37460116 + MGP_NODShiLtJ_P0064682 Cga protein_coding protein_coding MGP_NODShiLtJ_T0064683.1 MGP_NODShiLtJ_G0027947.1 mouse_genomes_project 4 37438403 37459878 + MGP_NODShiLtJ_P0064683 Cga protein_coding protein_coding MGP_NODShiLtJ_T0064684.1 MGP_NODShiLtJ_G0027947.1 mouse_genomes_project 4 37438403 37459924 + MGP_NODShiLtJ_P0064684 Cga protein_coding protein_coding MGP_NODShiLtJ_T0066764.1 MGP_NODShiLtJ_G0028424.1 mouse_genomes_project 4 129794422 129800217 - Rad54l protein_coding processed_transcript MGP_NODShiLtJ_T0066765.1 MGP_NODShiLtJ_G0028424.1 mouse_genomes_project 4 129797074 129824655 - MGP_NODShiLtJ_P0066765 Rad54l protein_coding protein_coding MGP_NODShiLtJ_T0066766.1 MGP_NODShiLtJ_G0028424.1 mouse_genomes_project 4 129797133 129824629 - MGP_NODShiLtJ_P0066766 Rad54l protein_coding protein_coding MGP_NODShiLtJ_T0066767.1 MGP_NODShiLtJ_G0028424.1 mouse_genomes_project 4 129811138 129823952 - Rad54l protein_coding processed_transcript MGP_NODShiLtJ_T0066768.1 MGP_NODShiLtJ_G0028424.1 mouse_genomes_project 4 129812432 129813926 - Rad54l protein_coding processed_transcript MGP_NODShiLtJ_T0066769.1 MGP_NODShiLtJ_G0028424.1 mouse_genomes_project 4 129818790 129824660 - Rad54l protein_coding processed_transcript MGP_NODShiLtJ_T0007748.1 MGP_NODShiLtJ_G0006327.1 mouse_genomes_project 4 18962478 18965633 - Gm12354 lincRNA lincRNA MGP_NODShiLtJ_T0007749.1 MGP_NODShiLtJ_G0006327.1 mouse_genomes_project 4 18962478 18965946 - Gm12354 lincRNA lincRNA MGP_NODShiLtJ_T0067318.1 MGP_NODShiLtJ_G0028551.1 mouse_genomes_project 4 138509473 138509992 - MGP_NODShiLtJ_P0067318 4930535I16Rik protein_coding protein_coding MGP_NODShiLtJ_T0068781.1 MGP_NODShiLtJ_G0028894.1 mouse_genomes_project 4 161068181 161077572 - MGP_NODShiLtJ_P0068781 Gm13125 protein_coding protein_coding MGP_NODShiLtJ_T0064826.1 MGP_NODShiLtJ_G0027985.1 mouse_genomes_project 4 45884249 45887112 - MGP_NODShiLtJ_P0064826 Sigmar1 protein_coding protein_coding MGP_NODShiLtJ_T0064827.1 MGP_NODShiLtJ_G0027985.1 mouse_genomes_project 4 45884249 45887112 - MGP_NODShiLtJ_P0064827 Sigmar1 protein_coding protein_coding MGP_NODShiLtJ_T0064828.1 MGP_NODShiLtJ_G0027985.1 mouse_genomes_project 4 45884853 45890803 - Sigmar1 protein_coding processed_transcript MGP_NODShiLtJ_T0064829.1 MGP_NODShiLtJ_G0027985.1 mouse_genomes_project 4 45885257 45902224 - Sigmar1 protein_coding processed_transcript MGP_NODShiLtJ_T0064830.1 MGP_NODShiLtJ_G0027985.1 mouse_genomes_project 4 45886201 45886939 - Sigmar1 protein_coding retained_intron MGP_NODShiLtJ_T0064831.1 MGP_NODShiLtJ_G0027985.1 mouse_genomes_project 4 45886333 45886801 - Sigmar1 protein_coding retained_intron MGP_NODShiLtJ_T0064832.1 MGP_NODShiLtJ_G0027985.1 mouse_genomes_project 4 45886355 45887073 - Sigmar1 protein_coding processed_transcript MGP_NODShiLtJ_T0064833.1 MGP_NODShiLtJ_G0027985.1 mouse_genomes_project 4 45901648 45902982 - Sigmar1 protein_coding processed_transcript MGP_NODShiLtJ_T0066601.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 124212572 124924552 + MGP_NODShiLtJ_P0066601 protein_coding protein_coding MGP_NODShiLtJ_T0066602.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 124212609 124530264 + MGP_NODShiLtJ_P0066602 protein_coding protein_coding MGP_NODShiLtJ_T0066603.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 124212609 125650713 + MGP_NODShiLtJ_P0066603 protein_coding protein_coding MGP_NODShiLtJ_T0066604.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 124212609 125748764 + MGP_NODShiLtJ_P0066604 protein_coding protein_coding MGP_NODShiLtJ_T0066605.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 124212702 125741934 + MGP_NODShiLtJ_P0066605 protein_coding protein_coding MGP_NODShiLtJ_T0066606.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 124212702 125741934 + MGP_NODShiLtJ_P0066606 protein_coding protein_coding MGP_NODShiLtJ_T0066607.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 125154711 125703568 + MGP_NODShiLtJ_P0066607 protein_coding protein_coding MGP_NODShiLtJ_T0066614.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 125650397 125740993 + protein_coding processed_transcript MGP_NODShiLtJ_T0066615.1 MGP_NODShiLtJ_G0028384.1 mouse_genomes_project 4 125650427 125741931 + protein_coding processed_transcript MGP_NODShiLtJ_T0068855.1 MGP_NODShiLtJ_G0028921.1 mouse_genomes_project 4 165216341 165253442 - MGP_NODShiLtJ_P0068855 Draxin protein_coding protein_coding MGP_NODShiLtJ_T0065710.1 MGP_NODShiLtJ_G0028194.1 mouse_genomes_project 4 80942569 80944621 - MGP_NODShiLtJ_P0065710 Aldoart1 protein_coding protein_coding MGP_NODShiLtJ_T0065711.1 MGP_NODShiLtJ_G0028194.1 mouse_genomes_project 4 80942569 80944619 - MGP_NODShiLtJ_P0065711 Aldoart1 protein_coding protein_coding MGP_NODShiLtJ_T0014703.1 MGP_NODShiLtJ_G0012811.1 mouse_genomes_project 4 163798133 163798472 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014444.1 MGP_NODShiLtJ_G0012552.1 mouse_genomes_project 4 62257404 62258183 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010512.1 MGP_NODShiLtJ_G0008645.1 mouse_genomes_project 4 134913035 134913124 - Mir30c-1 miRNA miRNA MGP_NODShiLtJ_T0066944.1 MGP_NODShiLtJ_G0028457.1 mouse_genomes_project 4 131399785 131528304 + MGP_NODShiLtJ_P0066944 Eri3 protein_coding protein_coding MGP_NODShiLtJ_T0066945.1 MGP_NODShiLtJ_G0028457.1 mouse_genomes_project 4 131402030 131433213 + MGP_NODShiLtJ_P0066945 Eri3 protein_coding protein_coding MGP_NODShiLtJ_T0066946.1 MGP_NODShiLtJ_G0028457.1 mouse_genomes_project 4 131414078 131528304 + Eri3 protein_coding processed_transcript MGP_NODShiLtJ_T0066947.1 MGP_NODShiLtJ_G0028457.1 mouse_genomes_project 4 131433182 131466441 + MGP_NODShiLtJ_P0066947 Eri3 protein_coding protein_coding MGP_NODShiLtJ_T0066948.1 MGP_NODShiLtJ_G0028457.1 mouse_genomes_project 4 131439573 131466100 + Eri3 protein_coding processed_transcript MGP_NODShiLtJ_T0066949.1 MGP_NODShiLtJ_G0028457.1 mouse_genomes_project 4 131489909 131528288 + Eri3 protein_coding processed_transcript MGP_NODShiLtJ_T0066374.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120793684 120843978 + MGP_NODShiLtJ_P0066374 Yipf1 protein_coding protein_coding MGP_NODShiLtJ_T0066375.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120793690 120800779 + Yipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0066376.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120793705 120834148 + MGP_NODShiLtJ_P0066376 Yipf1 protein_coding protein_coding MGP_NODShiLtJ_T0066377.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120793733 120827715 + MGP_NODShiLtJ_P0066377 Yipf1 protein_coding protein_coding MGP_NODShiLtJ_T0066378.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120793758 120798356 + MGP_NODShiLtJ_P0066378 Yipf1 protein_coding protein_coding MGP_NODShiLtJ_T0066379.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120794452 120795161 + Yipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0066380.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120795086 120827326 + Yipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0066381.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120798310 120843979 + Yipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0066382.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120804029 120819150 + Yipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0066383.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120825758 120835265 + Yipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0066384.1 MGP_NODShiLtJ_G0028345.1 mouse_genomes_project 4 120827201 120843978 + Yipf1 protein_coding processed_transcript MGP_NODShiLtJ_T0010479.1 MGP_NODShiLtJ_G0008612.1 mouse_genomes_project 4 35786019 35786148 + Mir8118 miRNA miRNA MGP_NODShiLtJ_T0014364.1 MGP_NODShiLtJ_G0012472.1 mouse_genomes_project 4 35285130 35285457 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014321.1 MGP_NODShiLtJ_G0012429.1 mouse_genomes_project 4 21183302 21184101 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100522.1 MGP_NODShiLtJ_G0038916.1 mouse_genomes_project 4 29764866 29764995 + Gm25378 snoRNA snoRNA MGP_NODShiLtJ_T0068136.1 MGP_NODShiLtJ_G0028725.1 mouse_genomes_project 4 149758107 149771552 - MGP_NODShiLtJ_P0068136 Pdik1l protein_coding protein_coding MGP_NODShiLtJ_T0068137.1 MGP_NODShiLtJ_G0028725.1 mouse_genomes_project 4 149758107 149772208 - MGP_NODShiLtJ_P0068137 Pdik1l protein_coding protein_coding MGP_NODShiLtJ_T0068138.1 MGP_NODShiLtJ_G0028725.1 mouse_genomes_project 4 149758108 149771566 - MGP_NODShiLtJ_P0068138 Pdik1l protein_coding protein_coding MGP_NODShiLtJ_T0068139.1 MGP_NODShiLtJ_G0028725.1 mouse_genomes_project 4 149762802 149771538 - MGP_NODShiLtJ_P0068139 Pdik1l protein_coding protein_coding MGP_NODShiLtJ_T0068140.1 MGP_NODShiLtJ_G0028725.1 mouse_genomes_project 4 149763616 149771563 - MGP_NODShiLtJ_P0068140 Pdik1l protein_coding protein_coding MGP_NODShiLtJ_T0068141.1 MGP_NODShiLtJ_G0028725.1 mouse_genomes_project 4 149767881 149771538 - Pdik1l protein_coding processed_transcript MGP_NODShiLtJ_T0069316.1 MGP_NODShiLtJ_G0029001.1 mouse_genomes_project 4 172116746 172131646 + MGP_NODShiLtJ_P0069316 B230104I21Rik protein_coding protein_coding MGP_NODShiLtJ_T0014537.1 MGP_NODShiLtJ_G0012645.1 mouse_genomes_project 4 106905878 106906455 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100529.1 MGP_NODShiLtJ_G0038923.1 mouse_genomes_project 4 45294062 45294143 - Gm24837 snoRNA snoRNA MGP_NODShiLtJ_T0066658.1 MGP_NODShiLtJ_G0028393.1 mouse_genomes_project 4 127345455 127429150 - protein_coding retained_intron MGP_NODShiLtJ_T0004397.1 MGP_NODShiLtJ_G0003828.1 mouse_genomes_project 4 51782352 51793505 - Gm12426 antisense antisense MGP_NODShiLtJ_T0069179.1 MGP_NODShiLtJ_G0028979.1 mouse_genomes_project 4 169731220 169835939 + MGP_NODShiLtJ_P0069179 Acot7 protein_coding protein_coding MGP_NODShiLtJ_T0069180.1 MGP_NODShiLtJ_G0028979.1 mouse_genomes_project 4 169738911 169775530 + Acot7 protein_coding processed_transcript MGP_NODShiLtJ_T0069181.1 MGP_NODShiLtJ_G0028979.1 mouse_genomes_project 4 169739280 169835942 + MGP_NODShiLtJ_P0069181 Acot7 protein_coding protein_coding MGP_NODShiLtJ_T0069182.1 MGP_NODShiLtJ_G0028979.1 mouse_genomes_project 4 169739352 169835934 + MGP_NODShiLtJ_P0069182 Acot7 protein_coding protein_coding MGP_NODShiLtJ_T0069183.1 MGP_NODShiLtJ_G0028979.1 mouse_genomes_project 4 169753938 169835934 + MGP_NODShiLtJ_P0069183 Acot7 protein_coding protein_coding MGP_NODShiLtJ_T0069184.1 MGP_NODShiLtJ_G0028979.1 mouse_genomes_project 4 169753996 169775610 + Acot7 protein_coding processed_transcript MGP_NODShiLtJ_T0100546.1 MGP_NODShiLtJ_G0038940.1 mouse_genomes_project 4 62816345 62816471 + Gm22300 snoRNA snoRNA MGP_NODShiLtJ_T0068249.1 MGP_NODShiLtJ_G0028751.1 mouse_genomes_project 4 151280423 151302344 + MGP_NODShiLtJ_P0068249 Ifnlr1 protein_coding protein_coding MGP_NODShiLtJ_T0100562.1 MGP_NODShiLtJ_G0038956.1 mouse_genomes_project 4 105821966 105822094 - Gm23443 snoRNA snoRNA MGP_NODShiLtJ_T0007801.1 MGP_NODShiLtJ_G0006372.1 mouse_genomes_project 4 70172127 70177135 + Gm11482 lincRNA lincRNA MGP_NODShiLtJ_T0068333.1 MGP_NODShiLtJ_G0028771.1 mouse_genomes_project 4 152120310 152122026 + MGP_NODShiLtJ_P0068333 protein_coding protein_coding MGP_NODShiLtJ_T0101940.1 MGP_NODShiLtJ_G0040108.1 mouse_genomes_project 4 160004535 160007201 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017935.1 MGP_NODShiLtJ_G0015438.1 mouse_genomes_project 4 133225064 133227610 + Gm12898 processed_transcript processed_transcript MGP_NODShiLtJ_T0067945.1 MGP_NODShiLtJ_G0028682.1 mouse_genomes_project 4 147959197 147985946 - MGP_NODShiLtJ_P0067945 Smpdl3b protein_coding protein_coding MGP_NODShiLtJ_T0065342.1 MGP_NODShiLtJ_G0028090.1 mouse_genomes_project 4 54349393 54361168 + MGP_NODShiLtJ_P0065342 Zfp189 protein_coding protein_coding MGP_NODShiLtJ_T0065343.1 MGP_NODShiLtJ_G0028090.1 mouse_genomes_project 4 54349434 54361168 + MGP_NODShiLtJ_P0065343 Zfp189 protein_coding protein_coding MGP_NODShiLtJ_T0014494.1 MGP_NODShiLtJ_G0012602.1 mouse_genomes_project 4 85990078 85990423 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064552.1 MGP_NODShiLtJ_G0027916.1 mouse_genomes_project 4 25402800 25459497 - MGP_NODShiLtJ_P0064552 Fhl5 protein_coding protein_coding MGP_NODShiLtJ_T0064553.1 MGP_NODShiLtJ_G0027916.1 mouse_genomes_project 4 25402800 25459497 - MGP_NODShiLtJ_P0064553 Fhl5 protein_coding protein_coding MGP_NODShiLtJ_T0010548.1 MGP_NODShiLtJ_G0008681.1 mouse_genomes_project 4 166828284 166828344 + Mir5616 miRNA miRNA MGP_NODShiLtJ_T0014608.1 MGP_NODShiLtJ_G0012716.1 mouse_genomes_project 4 131622839 131623162 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014272.1 MGP_NODShiLtJ_G0012380.1 mouse_genomes_project 4 4056538 4057006 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064428.1 MGP_NODShiLtJ_G0027880.1 mouse_genomes_project 4 12420456 12545220 - MGP_NODShiLtJ_P0064428 Slc26a7 protein_coding protein_coding MGP_NODShiLtJ_T0064429.1 MGP_NODShiLtJ_G0027880.1 mouse_genomes_project 4 12424222 12435828 - Slc26a7 protein_coding processed_transcript MGP_NODShiLtJ_T0064430.1 MGP_NODShiLtJ_G0027880.1 mouse_genomes_project 4 12487996 12544930 - MGP_NODShiLtJ_P0064430 Slc26a7 protein_coding protein_coding MGP_NODShiLtJ_T0064431.1 MGP_NODShiLtJ_G0027880.1 mouse_genomes_project 4 12515893 12545084 - MGP_NODShiLtJ_P0064431 Slc26a7 protein_coding protein_coding MGP_NODShiLtJ_T0065063.1 MGP_NODShiLtJ_G0028024.1 mouse_genomes_project 4 47930995 47940003 - MGP_NODShiLtJ_P0065063 Fam221b protein_coding protein_coding MGP_NODShiLtJ_T0065064.1 MGP_NODShiLtJ_G0028024.1 mouse_genomes_project 4 47934479 47940007 - Fam221b protein_coding retained_intron MGP_NODShiLtJ_T0066524.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122640433 122703792 + MGP_NODShiLtJ_P0066524 Nrd1 protein_coding protein_coding MGP_NODShiLtJ_T0066525.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122640433 122703792 + MGP_NODShiLtJ_P0066525 Nrd1 protein_coding protein_coding MGP_NODShiLtJ_T0066526.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122640548 122703177 + MGP_NODShiLtJ_P0066526 Nrd1 protein_coding protein_coding MGP_NODShiLtJ_T0066527.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122658590 122686674 + MGP_NODShiLtJ_P0066527 Nrd1 protein_coding protein_coding MGP_NODShiLtJ_T0066528.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122665813 122674353 + Nrd1 protein_coding retained_intron MGP_NODShiLtJ_T0066529.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122674047 122685440 + Nrd1 protein_coding retained_intron MGP_NODShiLtJ_T0066530.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122681779 122686136 + Nrd1 protein_coding retained_intron MGP_NODShiLtJ_T0066531.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122682224 122703491 + Nrd1 protein_coding processed_transcript MGP_NODShiLtJ_T0066532.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122688304 122692914 + Nrd1 protein_coding processed_transcript MGP_NODShiLtJ_T0066533.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122696969 122698892 + Nrd1 protein_coding retained_intron MGP_NODShiLtJ_T0066534.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122700950 122701817 + Nrd1 protein_coding retained_intron MGP_NODShiLtJ_T0066535.1 MGP_NODShiLtJ_G0028373.1 mouse_genomes_project 4 122701007 122702696 + Nrd1 protein_coding retained_intron MGP_NODShiLtJ_T0064255.1 MGP_NODShiLtJ_G0027843.1 mouse_genomes_project 4 723422 737620 - MGP_NODShiLtJ_P0064255 Sdr16c5 protein_coding protein_coding MGP_NODShiLtJ_T0064256.1 MGP_NODShiLtJ_G0027843.1 mouse_genomes_project 4 730297 734578 - Sdr16c5 protein_coding processed_transcript MGP_NODShiLtJ_T0004406.1 MGP_NODShiLtJ_G0003837.1 mouse_genomes_project 4 69897883 69912527 + Aknaos antisense antisense MGP_NODShiLtJ_T0065561.1 MGP_NODShiLtJ_G0028154.1 mouse_genomes_project 4 68585594 68605406 - MGP_NODShiLtJ_P0065561 Zfp37 protein_coding protein_coding MGP_NODShiLtJ_T0065562.1 MGP_NODShiLtJ_G0028154.1 mouse_genomes_project 4 68587201 68605406 - MGP_NODShiLtJ_P0065562 Zfp37 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065563.1 MGP_NODShiLtJ_G0028154.1 mouse_genomes_project 4 68587201 68605406 - MGP_NODShiLtJ_P0065563 Zfp37 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065564.1 MGP_NODShiLtJ_G0028154.1 mouse_genomes_project 4 68588592 68605162 - Zfp37 protein_coding processed_transcript MGP_NODShiLtJ_T0065565.1 MGP_NODShiLtJ_G0028154.1 mouse_genomes_project 4 68588643 68604849 - Zfp37 protein_coding processed_transcript MGP_NODShiLtJ_T0007933.1 MGP_NODShiLtJ_G0006466.1 mouse_genomes_project 4 151990020 151991604 - Gm27022 lincRNA lincRNA MGP_NODShiLtJ_T0007893.1 MGP_NODShiLtJ_G0006442.1 mouse_genomes_project 4 143632598 143633575 + Gm12958 lincRNA lincRNA MGP_NODShiLtJ_T0067098.1 MGP_NODShiLtJ_G0028498.1 mouse_genomes_project 4 133205304 133218427 - MGP_NODShiLtJ_P0067098 4930538K18Rik protein_coding protein_coding MGP_NODShiLtJ_T0014587.1 MGP_NODShiLtJ_G0012695.1 mouse_genomes_project 4 124338075 124338343 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014389.1 MGP_NODShiLtJ_G0012497.1 mouse_genomes_project 4 44058398 44060286 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014662.1 MGP_NODShiLtJ_G0012770.1 mouse_genomes_project 4 148036911 148037196 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007764.1 MGP_NODShiLtJ_G0006342.1 mouse_genomes_project 4 44743587 44745832 - Gm6297 lincRNA lincRNA MGP_NODShiLtJ_T0007844.1 MGP_NODShiLtJ_G0006408.1 mouse_genomes_project 4 114415828 114426735 + lincRNA lincRNA MGP_NODShiLtJ_T0010522.1 MGP_NODShiLtJ_G0008655.1 mouse_genomes_project 4 144770959 144771031 - Mir7016 miRNA miRNA MGP_NODShiLtJ_T0069342.1 MGP_NODShiLtJ_G0029008.1 mouse_genomes_project 4 172760618 172777342 + MGP_NODShiLtJ_P0069342 Pank4 protein_coding protein_coding MGP_NODShiLtJ_T0069343.1 MGP_NODShiLtJ_G0029008.1 mouse_genomes_project 4 172760628 172777409 + MGP_NODShiLtJ_P0069343 Pank4 protein_coding protein_coding MGP_NODShiLtJ_T0069344.1 MGP_NODShiLtJ_G0029008.1 mouse_genomes_project 4 172766468 172777360 + MGP_NODShiLtJ_P0069344 Pank4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069345.1 MGP_NODShiLtJ_G0029008.1 mouse_genomes_project 4 172771002 172777409 + Pank4 protein_coding retained_intron MGP_NODShiLtJ_T0069346.1 MGP_NODShiLtJ_G0029008.1 mouse_genomes_project 4 172772742 172775626 + Pank4 protein_coding retained_intron MGP_NODShiLtJ_T0069347.1 MGP_NODShiLtJ_G0029008.1 mouse_genomes_project 4 172772750 172775696 + Pank4 protein_coding retained_intron MGP_NODShiLtJ_T0069348.1 MGP_NODShiLtJ_G0029008.1 mouse_genomes_project 4 172773049 172777405 + Pank4 protein_coding retained_intron MGP_NODShiLtJ_T0014642.1 MGP_NODShiLtJ_G0012750.1 mouse_genomes_project 4 139715784 139716108 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007809.1 MGP_NODShiLtJ_G0006380.1 mouse_genomes_project 4 92446389 92448286 - Gm12914 lincRNA lincRNA MGP_NODShiLtJ_T0067146.1 MGP_NODShiLtJ_G0028506.1 mouse_genomes_project 4 133497478 133526605 - MGP_NODShiLtJ_P0067146 Rimkla protein_coding protein_coding MGP_NODShiLtJ_T0067147.1 MGP_NODShiLtJ_G0028506.1 mouse_genomes_project 4 133506738 133526486 - Rimkla protein_coding processed_transcript MGP_NODShiLtJ_T0014322.1 MGP_NODShiLtJ_G0012430.1 mouse_genomes_project 4 21230887 21231156 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014540.1 MGP_NODShiLtJ_G0012648.1 mouse_genomes_project 4 108061311 108061640 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064475.1 MGP_NODShiLtJ_G0027900.1 mouse_genomes_project 4 19282508 19297186 + MGP_NODShiLtJ_P0064475 Ttpa protein_coding protein_coding MGP_NODShiLtJ_T0064476.1 MGP_NODShiLtJ_G0027900.1 mouse_genomes_project 4 19283013 19305724 + MGP_NODShiLtJ_P0064476 Ttpa protein_coding protein_coding MGP_NODShiLtJ_T0014283.1 MGP_NODShiLtJ_G0012391.1 mouse_genomes_project 4 8591141 8591423 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004452.1 MGP_NODShiLtJ_G0003867.1 mouse_genomes_project 4 129559652 129559912 - Gm29434 antisense antisense MGP_NODShiLtJ_T0004381.1 MGP_NODShiLtJ_G0003815.1 mouse_genomes_project 4 45625698 45628230 + antisense antisense MGP_NODShiLtJ_T0065252.1 MGP_NODShiLtJ_G0028065.1 mouse_genomes_project 4 50977324 50998948 + MGP_NODShiLtJ_P0065252 Anp32b protein_coding protein_coding MGP_NODShiLtJ_T0014615.1 MGP_NODShiLtJ_G0012723.1 mouse_genomes_project 4 132969006 132970012 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066616.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828017 125967965 + MGP_NODShiLtJ_P0066616 Spata6 protein_coding protein_coding MGP_NODShiLtJ_T0066617.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828042 125884844 + MGP_NODShiLtJ_P0066617 Spata6 protein_coding protein_coding MGP_NODShiLtJ_T0066618.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828043 125944305 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066619.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828071 125896231 + MGP_NODShiLtJ_P0066619 Spata6 protein_coding protein_coding MGP_NODShiLtJ_T0066620.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828092 125884904 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066621.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828096 125896951 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066622.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828136 125897537 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066623.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828162 125897001 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066624.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125828238 125968007 + MGP_NODShiLtJ_P0066624 Spata6 protein_coding protein_coding MGP_NODShiLtJ_T0066625.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125892739 125967017 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066626.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125895501 125967957 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066627.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125895540 125898212 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066628.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125943221 125960281 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0066629.1 MGP_NODShiLtJ_G0028386.1 mouse_genomes_project 4 125959742 125967025 + Spata6 protein_coding processed_transcript MGP_NODShiLtJ_T0069097.1 MGP_NODShiLtJ_G0028965.1 mouse_genomes_project 4 168484467 168525460 - MGP_NODShiLtJ_P0069097 Per3 protein_coding protein_coding MGP_NODShiLtJ_T0069098.1 MGP_NODShiLtJ_G0028965.1 mouse_genomes_project 4 168484601 168496954 - Per3 protein_coding processed_transcript MGP_NODShiLtJ_T0069099.1 MGP_NODShiLtJ_G0028965.1 mouse_genomes_project 4 168492246 168512300 - Per3 protein_coding retained_intron MGP_NODShiLtJ_T0069100.1 MGP_NODShiLtJ_G0028965.1 mouse_genomes_project 4 168492246 168525460 - MGP_NODShiLtJ_P0069100 Per3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069101.1 MGP_NODShiLtJ_G0028965.1 mouse_genomes_project 4 168504997 168525460 - Per3 protein_coding retained_intron MGP_NODShiLtJ_T0065065.1 MGP_NODShiLtJ_G0028025.1 mouse_genomes_project 4 47940411 47957314 + protein_coding processed_transcript MGP_NODShiLtJ_T0065066.1 MGP_NODShiLtJ_G0028025.1 mouse_genomes_project 4 47940475 47961203 + MGP_NODShiLtJ_P0065066 protein_coding protein_coding MGP_NODShiLtJ_T0065067.1 MGP_NODShiLtJ_G0028025.1 mouse_genomes_project 4 47940709 47956517 + MGP_NODShiLtJ_P0065067 protein_coding protein_coding MGP_NODShiLtJ_T0065068.1 MGP_NODShiLtJ_G0028025.1 mouse_genomes_project 4 47940770 47952185 + protein_coding processed_transcript MGP_NODShiLtJ_T0065069.1 MGP_NODShiLtJ_G0028025.1 mouse_genomes_project 4 47945332 47957106 + protein_coding processed_transcript MGP_NODShiLtJ_T0065070.1 MGP_NODShiLtJ_G0028025.1 mouse_genomes_project 4 47960530 47961337 + protein_coding processed_transcript MGP_NODShiLtJ_T0067248.1 MGP_NODShiLtJ_G0028535.1 mouse_genomes_project 4 137376564 137391761 - Mfsd2a protein_coding processed_transcript MGP_NODShiLtJ_T0067249.1 MGP_NODShiLtJ_G0028535.1 mouse_genomes_project 4 137376564 137391797 - MGP_NODShiLtJ_P0067249 Mfsd2a protein_coding protein_coding MGP_NODShiLtJ_T0067250.1 MGP_NODShiLtJ_G0028535.1 mouse_genomes_project 4 137387335 137390597 - Mfsd2a protein_coding processed_transcript MGP_NODShiLtJ_T0067251.1 MGP_NODShiLtJ_G0028535.1 mouse_genomes_project 4 137387362 137391797 - MGP_NODShiLtJ_P0067251 Mfsd2a protein_coding protein_coding MGP_NODShiLtJ_T0007837.1 MGP_NODShiLtJ_G0006403.1 mouse_genomes_project 4 112961275 112975996 + Gm12702 lincRNA lincRNA MGP_NODShiLtJ_T0065579.1 MGP_NODShiLtJ_G0028160.1 mouse_genomes_project 4 68850614 68856663 - MGP_NODShiLtJ_P0065579 Rnf183 protein_coding protein_coding MGP_NODShiLtJ_T0065580.1 MGP_NODShiLtJ_G0028160.1 mouse_genomes_project 4 68850616 68856137 - MGP_NODShiLtJ_P0065580 Rnf183 protein_coding protein_coding MGP_NODShiLtJ_T0065581.1 MGP_NODShiLtJ_G0028160.1 mouse_genomes_project 4 68851061 68851634 - MGP_NODShiLtJ_P0065581 Rnf183 protein_coding protein_coding MGP_NODShiLtJ_T0066863.1 MGP_NODShiLtJ_G0028442.1 mouse_genomes_project 4 130590858 130602320 + MGP_NODShiLtJ_P0066863 Mutyh protein_coding protein_coding MGP_NODShiLtJ_T0066864.1 MGP_NODShiLtJ_G0028442.1 mouse_genomes_project 4 130590860 130598539 + MGP_NODShiLtJ_P0066864 Mutyh protein_coding protein_coding MGP_NODShiLtJ_T0066865.1 MGP_NODShiLtJ_G0028442.1 mouse_genomes_project 4 130590873 130602327 + Mutyh protein_coding retained_intron MGP_NODShiLtJ_T0066866.1 MGP_NODShiLtJ_G0028442.1 mouse_genomes_project 4 130590883 130601657 + Mutyh protein_coding retained_intron MGP_NODShiLtJ_T0066867.1 MGP_NODShiLtJ_G0028442.1 mouse_genomes_project 4 130597263 130602272 + MGP_NODShiLtJ_P0066867 Mutyh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066868.1 MGP_NODShiLtJ_G0028442.1 mouse_genomes_project 4 130597321 130599925 + Mutyh protein_coding retained_intron MGP_NODShiLtJ_T0066869.1 MGP_NODShiLtJ_G0028442.1 mouse_genomes_project 4 130600583 130602329 + Mutyh protein_coding retained_intron MGP_NODShiLtJ_T0069518.1 MGP_NODShiLtJ_G0029039.1 mouse_genomes_project 4 173745469 173765093 + Cpsf3l protein_coding processed_transcript MGP_NODShiLtJ_T0069519.1 MGP_NODShiLtJ_G0029039.1 mouse_genomes_project 4 173745469 173765497 + MGP_NODShiLtJ_P0069519 Cpsf3l protein_coding protein_coding MGP_NODShiLtJ_T0069520.1 MGP_NODShiLtJ_G0029039.1 mouse_genomes_project 4 173745469 173765079 + MGP_NODShiLtJ_P0069520 Cpsf3l protein_coding protein_coding MGP_NODShiLtJ_T0069521.1 MGP_NODShiLtJ_G0029039.1 mouse_genomes_project 4 173745490 173748218 + Cpsf3l protein_coding retained_intron MGP_NODShiLtJ_T0069522.1 MGP_NODShiLtJ_G0029039.1 mouse_genomes_project 4 173745538 173763320 + MGP_NODShiLtJ_P0069522 Cpsf3l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069523.1 MGP_NODShiLtJ_G0029039.1 mouse_genomes_project 4 173764178 173764881 + Cpsf3l protein_coding retained_intron MGP_NODShiLtJ_T0069525.1 MGP_NODShiLtJ_G0029039.1 mouse_genomes_project 4 173764516 173765127 + Cpsf3l protein_coding retained_intron MGP_NODShiLtJ_T0064396.1 MGP_NODShiLtJ_G0027872.1 mouse_genomes_project 4 9500947 9509644 - MGP_NODShiLtJ_P0064396 Pdp1 protein_coding protein_coding MGP_NODShiLtJ_T0064397.1 MGP_NODShiLtJ_G0027872.1 mouse_genomes_project 4 9503215 9509173 - MGP_NODShiLtJ_P0064397 Pdp1 protein_coding protein_coding MGP_NODShiLtJ_T0064398.1 MGP_NODShiLtJ_G0027872.1 mouse_genomes_project 4 9503215 9509013 - MGP_NODShiLtJ_P0064398 Pdp1 protein_coding protein_coding MGP_NODShiLtJ_T0064399.1 MGP_NODShiLtJ_G0027872.1 mouse_genomes_project 4 9503215 9509119 - MGP_NODShiLtJ_P0064399 Pdp1 protein_coding protein_coding MGP_NODShiLtJ_T0064400.1 MGP_NODShiLtJ_G0027872.1 mouse_genomes_project 4 9503215 9509619 - MGP_NODShiLtJ_P0064400 Pdp1 protein_coding protein_coding MGP_NODShiLtJ_T0064401.1 MGP_NODShiLtJ_G0027872.1 mouse_genomes_project 4 9503219 9509612 - MGP_NODShiLtJ_P0064401 Pdp1 protein_coding protein_coding MGP_NODShiLtJ_T0004498.1 MGP_NODShiLtJ_G0003905.1 mouse_genomes_project 4 151643991 151644369 - Gm24362 antisense antisense MGP_NODShiLtJ_T0067066.1 MGP_NODShiLtJ_G0028484.1 mouse_genomes_project 4 132648075 132649023 + MGP_NODShiLtJ_P0067066 Olfr1340 protein_coding protein_coding MGP_NODShiLtJ_T0065700.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80073538 80159044 - MGP_NODShiLtJ_P0065700 Tle1 protein_coding protein_coding MGP_NODShiLtJ_T0065701.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80074201 80158982 - MGP_NODShiLtJ_P0065701 Tle1 protein_coding protein_coding MGP_NODShiLtJ_T0065702.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80074203 80158979 - MGP_NODShiLtJ_P0065702 Tle1 protein_coding protein_coding MGP_NODShiLtJ_T0065703.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80074206 80157217 - Tle1 protein_coding retained_intron MGP_NODShiLtJ_T0065704.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80074604 80158277 - MGP_NODShiLtJ_P0065704 Tle1 protein_coding protein_coding MGP_NODShiLtJ_T0065705.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80074619 80077153 - Tle1 protein_coding processed_transcript MGP_NODShiLtJ_T0065706.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80095951 80098688 - MGP_NODShiLtJ_P0065706 Tle1 protein_coding protein_coding MGP_NODShiLtJ_T0065707.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80114900 80158987 - MGP_NODShiLtJ_P0065707 Tle1 protein_coding protein_coding MGP_NODShiLtJ_T0065708.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80115592 80157617 - MGP_NODShiLtJ_P0065708 Tle1 protein_coding protein_coding MGP_NODShiLtJ_T0065709.1 MGP_NODShiLtJ_G0028193.1 mouse_genomes_project 4 80124501 80159018 - Tle1 protein_coding processed_transcript MGP_NODShiLtJ_T0064641.1 MGP_NODShiLtJ_G0027939.1 mouse_genomes_project 4 37041173 37056682 + MGP_NODShiLtJ_P0064641 Akirin2 protein_coding protein_coding MGP_NODShiLtJ_T0064642.1 MGP_NODShiLtJ_G0027939.1 mouse_genomes_project 4 37041187 37052543 + Akirin2 protein_coding processed_transcript MGP_NODShiLtJ_T0069361.1 MGP_NODShiLtJ_G0029010.1 mouse_genomes_project 4 172866413 172871831 + MGP_NODShiLtJ_P0069361 Pex10 protein_coding protein_coding MGP_NODShiLtJ_T0069362.1 MGP_NODShiLtJ_G0029010.1 mouse_genomes_project 4 172866451 172868279 + Pex10 protein_coding processed_transcript MGP_NODShiLtJ_T0069363.1 MGP_NODShiLtJ_G0029010.1 mouse_genomes_project 4 172866454 172871579 + Pex10 protein_coding processed_transcript MGP_NODShiLtJ_T0069364.1 MGP_NODShiLtJ_G0029010.1 mouse_genomes_project 4 172866456 172867421 + Pex10 protein_coding processed_transcript MGP_NODShiLtJ_T0069365.1 MGP_NODShiLtJ_G0029010.1 mouse_genomes_project 4 172866456 172868514 + Pex10 protein_coding processed_transcript MGP_NODShiLtJ_T0001381.1 MGP_NODShiLtJ_G0001301.1 mouse_genomes_project 4 49053646 49055958 + TEC TEC MGP_NODShiLtJ_T0007816.1 MGP_NODShiLtJ_G0006385.1 mouse_genomes_project 4 94714595 94717436 - 6030471H07Rik lincRNA lincRNA MGP_NODShiLtJ_T0099287.1 MGP_NODShiLtJ_G0037681.1 mouse_genomes_project 4 122039492 122039599 - Gm24967 snRNA snRNA MGP_NODShiLtJ_T0014333.1 MGP_NODShiLtJ_G0012441.1 mouse_genomes_project 4 25512409 25513103 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064967.1 MGP_NODShiLtJ_G0028009.1 mouse_genomes_project 4 47683387 47689536 + MGP_NODShiLtJ_P0064967 Tesk1 protein_coding protein_coding MGP_NODShiLtJ_T0064968.1 MGP_NODShiLtJ_G0028009.1 mouse_genomes_project 4 47684792 47689266 + MGP_NODShiLtJ_P0064968 Tesk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064969.1 MGP_NODShiLtJ_G0028009.1 mouse_genomes_project 4 47686046 47686852 + Tesk1 protein_coding retained_intron MGP_NODShiLtJ_T0064970.1 MGP_NODShiLtJ_G0028009.1 mouse_genomes_project 4 47686179 47687289 + Tesk1 protein_coding retained_intron MGP_NODShiLtJ_T0064971.1 MGP_NODShiLtJ_G0028009.1 mouse_genomes_project 4 47686421 47687483 + Tesk1 protein_coding retained_intron MGP_NODShiLtJ_T0067942.1 MGP_NODShiLtJ_G0028681.1 mouse_genomes_project 4 147950923 147958777 - MGP_NODShiLtJ_P0067942 Xkr8 protein_coding protein_coding MGP_NODShiLtJ_T0067943.1 MGP_NODShiLtJ_G0028681.1 mouse_genomes_project 4 147954737 147958759 - Xkr8 protein_coding processed_transcript MGP_NODShiLtJ_T0067944.1 MGP_NODShiLtJ_G0028681.1 mouse_genomes_project 4 147957134 147958714 - Xkr8 protein_coding processed_transcript MGP_NODShiLtJ_T0014359.1 MGP_NODShiLtJ_G0012467.1 mouse_genomes_project 4 34364843 34365280 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067235.1 MGP_NODShiLtJ_G0028531.1 mouse_genomes_project 4 135820995 135828684 - MGP_NODShiLtJ_P0067235 Gm12887 protein_coding protein_coding MGP_NODShiLtJ_T0067353.1 MGP_NODShiLtJ_G0028562.1 mouse_genomes_project 4 139561963 139567981 + MGP_NODShiLtJ_P0067353 protein_coding protein_coding MGP_NODShiLtJ_T0067354.1 MGP_NODShiLtJ_G0028562.1 mouse_genomes_project 4 139566849 139604224 + MGP_NODShiLtJ_P0067354 protein_coding protein_coding MGP_NODShiLtJ_T0067355.1 MGP_NODShiLtJ_G0028562.1 mouse_genomes_project 4 139581595 139586163 + protein_coding processed_transcript MGP_NODShiLtJ_T0064472.1 MGP_NODShiLtJ_G0027898.1 mouse_genomes_project 4 19067802 19101000 + MGP_NODShiLtJ_P0064472 Slc7a13 protein_coding protein_coding MGP_NODShiLtJ_T0065257.1 MGP_NODShiLtJ_G0028067.1 mouse_genomes_project 4 51021998 51064603 - MGP_NODShiLtJ_P0065257 Trim14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065258.1 MGP_NODShiLtJ_G0028067.1 mouse_genomes_project 4 51023036 51062895 - Trim14 protein_coding processed_transcript MGP_NODShiLtJ_T0065259.1 MGP_NODShiLtJ_G0028067.1 mouse_genomes_project 4 51035411 51064622 - MGP_NODShiLtJ_P0065259 Trim14 protein_coding protein_coding MGP_NODShiLtJ_T0065260.1 MGP_NODShiLtJ_G0028067.1 mouse_genomes_project 4 51035952 51062923 - Trim14 protein_coding processed_transcript MGP_NODShiLtJ_T0065261.1 MGP_NODShiLtJ_G0028067.1 mouse_genomes_project 4 51039334 51064595 - MGP_NODShiLtJ_P0065261 Trim14 protein_coding protein_coding MGP_NODShiLtJ_T0065262.1 MGP_NODShiLtJ_G0028067.1 mouse_genomes_project 4 51050181 51063085 - Trim14 protein_coding processed_transcript MGP_NODShiLtJ_T0068751.1 MGP_NODShiLtJ_G0028876.1 mouse_genomes_project 4 160004425 160128907 + MGP_NODShiLtJ_P0068751 protein_coding protein_coding MGP_NODShiLtJ_T0004408.1 MGP_NODShiLtJ_G0003839.1 mouse_genomes_project 4 82703395 82704787 - A230083N12Rik antisense antisense MGP_NODShiLtJ_T0064911.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47255742 47270532 - MGP_NODShiLtJ_P0064911 Fam214b protein_coding protein_coding MGP_NODShiLtJ_T0064912.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47255742 47265252 - MGP_NODShiLtJ_P0064912 Fam214b protein_coding protein_coding MGP_NODShiLtJ_T0064913.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47255742 47270504 - MGP_NODShiLtJ_P0064913 Fam214b protein_coding protein_coding MGP_NODShiLtJ_T0064914.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47255742 47265255 - MGP_NODShiLtJ_P0064914 Fam214b protein_coding protein_coding MGP_NODShiLtJ_T0064915.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47255742 47272289 - MGP_NODShiLtJ_P0064915 Fam214b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064916.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47257490 47270967 - MGP_NODShiLtJ_P0064916 Fam214b protein_coding protein_coding MGP_NODShiLtJ_T0064917.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47260672 47265259 - MGP_NODShiLtJ_P0064917 Fam214b protein_coding protein_coding MGP_NODShiLtJ_T0064918.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47260953 47261655 - MGP_NODShiLtJ_P0064918 Fam214b protein_coding protein_coding MGP_NODShiLtJ_T0064919.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47261056 47264295 - MGP_NODShiLtJ_P0064919 Fam214b protein_coding protein_coding MGP_NODShiLtJ_T0064920.1 MGP_NODShiLtJ_G0028004.1 mouse_genomes_project 4 47261330 47270466 - Fam214b protein_coding processed_transcript MGP_NODShiLtJ_T0100542.1 MGP_NODShiLtJ_G0038936.1 mouse_genomes_project 4 62565932 62566064 - Gm26144 snoRNA snoRNA MGP_NODShiLtJ_T0068656.1 MGP_NODShiLtJ_G0028851.1 mouse_genomes_project 4 157678766 157683267 + MGP_NODShiLtJ_P0068656 Hspb7 protein_coding protein_coding MGP_NODShiLtJ_T0017875.1 MGP_NODShiLtJ_G0015399.1 mouse_genomes_project 4 868480 920038 + A830012C17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0101928.1 MGP_NODShiLtJ_G0040096.1 mouse_genomes_project 4 132792263 132793948 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014347.1 MGP_NODShiLtJ_G0012455.1 mouse_genomes_project 4 29747124 29748131 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014679.1 MGP_NODShiLtJ_G0012787.1 mouse_genomes_project 4 151944736 151945259 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067120.1 MGP_NODShiLtJ_G0028502.1 mouse_genomes_project 4 133309189 133331726 - MGP_NODShiLtJ_P0067120 Ppih protein_coding protein_coding MGP_NODShiLtJ_T0067121.1 MGP_NODShiLtJ_G0028502.1 mouse_genomes_project 4 133309189 133331788 - MGP_NODShiLtJ_P0067121 Ppih protein_coding protein_coding MGP_NODShiLtJ_T0067122.1 MGP_NODShiLtJ_G0028502.1 mouse_genomes_project 4 133309189 133331739 - MGP_NODShiLtJ_P0067122 Ppih protein_coding protein_coding MGP_NODShiLtJ_T0067123.1 MGP_NODShiLtJ_G0028502.1 mouse_genomes_project 4 133315917 133331659 - MGP_NODShiLtJ_P0067123 Ppih protein_coding protein_coding MGP_NODShiLtJ_T0067124.1 MGP_NODShiLtJ_G0028502.1 mouse_genomes_project 4 133316492 133331726 - MGP_NODShiLtJ_P0067124 Ppih protein_coding protein_coding MGP_NODShiLtJ_T0067125.1 MGP_NODShiLtJ_G0028502.1 mouse_genomes_project 4 133320644 133331741 - MGP_NODShiLtJ_P0067125 Ppih protein_coding protein_coding MGP_NODShiLtJ_T0014328.1 MGP_NODShiLtJ_G0012436.1 mouse_genomes_project 4 23357275 23358476 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068168.1 MGP_NODShiLtJ_G0028734.1 mouse_genomes_project 4 150042851 150052525 - MGP_NODShiLtJ_P0068168 Mtfr1l protein_coding protein_coding MGP_NODShiLtJ_T0068169.1 MGP_NODShiLtJ_G0028734.1 mouse_genomes_project 4 150042858 150052644 - MGP_NODShiLtJ_P0068169 Mtfr1l protein_coding protein_coding MGP_NODShiLtJ_T0068170.1 MGP_NODShiLtJ_G0028734.1 mouse_genomes_project 4 150042865 150052555 - MGP_NODShiLtJ_P0068170 Mtfr1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068171.1 MGP_NODShiLtJ_G0028734.1 mouse_genomes_project 4 150045643 150052515 - Mtfr1l protein_coding retained_intron MGP_NODShiLtJ_T0068172.1 MGP_NODShiLtJ_G0028734.1 mouse_genomes_project 4 150046384 150052353 - MGP_NODShiLtJ_P0068172 Mtfr1l protein_coding protein_coding MGP_NODShiLtJ_T0068173.1 MGP_NODShiLtJ_G0028734.1 mouse_genomes_project 4 150046419 150052644 - MGP_NODShiLtJ_P0068173 Mtfr1l protein_coding protein_coding MGP_NODShiLtJ_T0068174.1 MGP_NODShiLtJ_G0028734.1 mouse_genomes_project 4 150046491 150052301 - Mtfr1l protein_coding retained_intron MGP_NODShiLtJ_T0064438.1 MGP_NODShiLtJ_G0027884.1 mouse_genomes_project 4 12911683 13114301 - MGP_NODShiLtJ_P0064438 Necab1 protein_coding protein_coding MGP_NODShiLtJ_T0064439.1 MGP_NODShiLtJ_G0027884.1 mouse_genomes_project 4 12914367 13114964 - MGP_NODShiLtJ_P0064439 Necab1 protein_coding protein_coding MGP_NODShiLtJ_T0064440.1 MGP_NODShiLtJ_G0027884.1 mouse_genomes_project 4 13077489 13114131 - Necab1 protein_coding processed_transcript MGP_NODShiLtJ_T0017897.1 MGP_NODShiLtJ_G0015410.1 mouse_genomes_project 4 45630003 45635130 + Gm12404 processed_transcript processed_transcript MGP_NODShiLtJ_T0098158.1 MGP_NODShiLtJ_G0036570.1 mouse_genomes_project 4 20777491 20777847 + Gm22817 ribozyme ribozyme MGP_NODShiLtJ_T0007951.1 MGP_NODShiLtJ_G0006483.1 mouse_genomes_project 4 158168402 158169790 + Gm29367 lincRNA lincRNA MGP_NODShiLtJ_T0014556.1 MGP_NODShiLtJ_G0012664.1 mouse_genomes_project 4 114195047 114195219 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014422.1 MGP_NODShiLtJ_G0012530.1 mouse_genomes_project 4 57703642 57704262 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068297.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151654090 151654628 - Rpl11 protein_coding processed_transcript MGP_NODShiLtJ_T0068298.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151654090 151679119 - Rpl11 protein_coding processed_transcript MGP_NODShiLtJ_T0068299.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151676163 151679827 - MGP_NODShiLtJ_P0068299 Rpl11 protein_coding protein_coding MGP_NODShiLtJ_T0068300.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151676379 151676959 - Rpl11 protein_coding processed_transcript MGP_NODShiLtJ_T0068301.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151676422 151679430 - Rpl11 protein_coding processed_transcript MGP_NODShiLtJ_T0068302.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151676712 151679524 - MGP_NODShiLtJ_P0068302 Rpl11 protein_coding protein_coding MGP_NODShiLtJ_T0068303.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151676764 151679188 - Rpl11 protein_coding processed_transcript MGP_NODShiLtJ_T0068304.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151677065 151679140 - Rpl11 protein_coding processed_transcript MGP_NODShiLtJ_T0068305.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151677460 151679150 - Rpl11 protein_coding processed_transcript MGP_NODShiLtJ_T0068306.1 MGP_NODShiLtJ_G0028763.1 mouse_genomes_project 4 151677673 151679862 - Rpl11 protein_coding processed_transcript MGP_NODShiLtJ_T0066518.1 MGP_NODShiLtJ_G0028371.1 mouse_genomes_project 4 122464810 122466439 + MGP_NODShiLtJ_P0066518 Kti12 protein_coding protein_coding MGP_NODShiLtJ_T0011455.1 MGP_NODShiLtJ_G0009588.1 mouse_genomes_project 4 52220373 52220493 + Gm27668 misc_RNA misc_RNA MGP_NODShiLtJ_T0101910.1 MGP_NODShiLtJ_G0040078.1 mouse_genomes_project 4 82189638 82190334 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004432.1 MGP_NODShiLtJ_G0003853.1 mouse_genomes_project 4 116125721 116149658 - Gm12709 antisense antisense MGP_NODShiLtJ_T0004543.1 MGP_NODShiLtJ_G0003938.1 mouse_genomes_project 4 167227798 167231930 + Gm13070 antisense antisense MGP_NODShiLtJ_T0065681.1 MGP_NODShiLtJ_G0028187.1 mouse_genomes_project 4 72406567 72417855 + MGP_NODShiLtJ_P0065681 Trim32 protein_coding protein_coding MGP_NODShiLtJ_T0065682.1 MGP_NODShiLtJ_G0028187.1 mouse_genomes_project 4 72406567 72417855 + MGP_NODShiLtJ_P0065682 Trim32 protein_coding protein_coding MGP_NODShiLtJ_T0065683.1 MGP_NODShiLtJ_G0028187.1 mouse_genomes_project 4 72406830 72415233 + MGP_NODShiLtJ_P0065683 Trim32 protein_coding protein_coding MGP_NODShiLtJ_T0065684.1 MGP_NODShiLtJ_G0028187.1 mouse_genomes_project 4 72406830 72415373 + MGP_NODShiLtJ_P0065684 Trim32 protein_coding protein_coding MGP_NODShiLtJ_T0065714.1 MGP_NODShiLtJ_G0028196.1 mouse_genomes_project 4 82298983 82301384 - 2310002L09Rik protein_coding processed_transcript MGP_NODShiLtJ_T0065715.1 MGP_NODShiLtJ_G0028196.1 mouse_genomes_project 4 82298983 82312846 - MGP_NODShiLtJ_P0065715 2310002L09Rik protein_coding protein_coding MGP_NODShiLtJ_T0065716.1 MGP_NODShiLtJ_G0028196.1 mouse_genomes_project 4 82301161 82312845 - MGP_NODShiLtJ_P0065716 2310002L09Rik protein_coding protein_coding MGP_NODShiLtJ_T0064990.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47749328 47750421 - MGP_NODShiLtJ_P0064990 Arhgef39 protein_coding protein_coding MGP_NODShiLtJ_T0064991.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47749328 47752882 - MGP_NODShiLtJ_P0064991 Arhgef39 protein_coding protein_coding MGP_NODShiLtJ_T0064992.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47749332 47752806 - Arhgef39 protein_coding processed_transcript MGP_NODShiLtJ_T0064993.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47749334 47750400 - Arhgef39 protein_coding processed_transcript MGP_NODShiLtJ_T0064994.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47749710 47752848 - Arhgef39 protein_coding processed_transcript MGP_NODShiLtJ_T0064995.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47750007 47752795 - MGP_NODShiLtJ_P0064995 Arhgef39 protein_coding protein_coding MGP_NODShiLtJ_T0064996.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47750406 47752302 - Arhgef39 protein_coding processed_transcript MGP_NODShiLtJ_T0064997.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47750447 47752262 - Arhgef39 protein_coding processed_transcript MGP_NODShiLtJ_T0064998.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47750918 47752798 - Arhgef39 protein_coding processed_transcript MGP_NODShiLtJ_T0064999.1 MGP_NODShiLtJ_G0028013.1 mouse_genomes_project 4 47752333 47752848 - Arhgef39 protein_coding processed_transcript MGP_NODShiLtJ_T0014428.1 MGP_NODShiLtJ_G0012536.1 mouse_genomes_project 4 58471895 58473983 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069132.1 MGP_NODShiLtJ_G0028971.1 mouse_genomes_project 4 169550411 169559191 + MGP_NODShiLtJ_P0069132 Klhl21 protein_coding protein_coding MGP_NODShiLtJ_T0069464.1 MGP_NODShiLtJ_G0029027.1 mouse_genomes_project 4 173589629 173594996 + MGP_NODShiLtJ_P0069464 Tmem240 protein_coding protein_coding MGP_NODShiLtJ_T0069465.1 MGP_NODShiLtJ_G0029027.1 mouse_genomes_project 4 173589633 173595418 + Tmem240 protein_coding retained_intron MGP_NODShiLtJ_T0069466.1 MGP_NODShiLtJ_G0029027.1 mouse_genomes_project 4 173589703 173595418 + MGP_NODShiLtJ_P0069466 Tmem240 protein_coding protein_coding MGP_NODShiLtJ_T0014593.1 MGP_NODShiLtJ_G0012701.1 mouse_genomes_project 4 128782104 128789357 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067326.1 MGP_NODShiLtJ_G0028555.1 mouse_genomes_project 4 139364316 139373344 + MGP_NODShiLtJ_P0067326 Fhl3 protein_coding protein_coding MGP_NODShiLtJ_T0067327.1 MGP_NODShiLtJ_G0028555.1 mouse_genomes_project 4 139364334 139373228 + MGP_NODShiLtJ_P0067327 Fhl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014397.1 MGP_NODShiLtJ_G0012505.1 mouse_genomes_project 4 48076740 48078100 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066496.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122214280 122228466 + MGP_NODShiLtJ_P0066496 Cc2d1b protein_coding protein_coding MGP_NODShiLtJ_T0066497.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122217852 122220347 + MGP_NODShiLtJ_P0066497 Cc2d1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066498.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122217903 122228466 + MGP_NODShiLtJ_P0066498 Cc2d1b protein_coding protein_coding MGP_NODShiLtJ_T0066499.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122220095 122221103 + Cc2d1b protein_coding retained_intron MGP_NODShiLtJ_T0066500.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122220360 122221444 + Cc2d1b protein_coding retained_intron MGP_NODShiLtJ_T0066501.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122220388 122228448 + Cc2d1b protein_coding retained_intron MGP_NODShiLtJ_T0066502.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122223930 122224743 + Cc2d1b protein_coding retained_intron MGP_NODShiLtJ_T0066503.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122223964 122224774 + Cc2d1b protein_coding processed_transcript MGP_NODShiLtJ_T0066504.1 MGP_NODShiLtJ_G0028365.1 mouse_genomes_project 4 122224790 122227606 + Cc2d1b protein_coding retained_intron MGP_NODShiLtJ_T0067068.1 MGP_NODShiLtJ_G0028486.1 mouse_genomes_project 4 132677024 132677966 - MGP_NODShiLtJ_P0067068 Olfr1338 protein_coding protein_coding MGP_NODShiLtJ_T0068146.1 MGP_NODShiLtJ_G0028727.1 mouse_genomes_project 4 149833908 149834227 - MGP_NODShiLtJ_P0068146 Gm8186 protein_coding protein_coding MGP_NODShiLtJ_T0098379.1 MGP_NODShiLtJ_G0036784.1 mouse_genomes_project 4 93152329 93155358 - Gm11267 sense_intronic sense_intronic MGP_NODShiLtJ_T0014323.1 MGP_NODShiLtJ_G0012431.1 mouse_genomes_project 4 21608944 21610372 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101942.1 MGP_NODShiLtJ_G0040110.1 mouse_genomes_project 4 160596965 160597523 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0066172.1 MGP_NODShiLtJ_G0028305.1 mouse_genomes_project 4 114973774 114980157 + MGP_NODShiLtJ_P0066172 Gm12794 protein_coding protein_coding MGP_NODShiLtJ_T0100552.1 MGP_NODShiLtJ_G0038946.1 mouse_genomes_project 4 81295147 81295274 + Gm25769 snoRNA snoRNA MGP_NODShiLtJ_T0066259.1 MGP_NODShiLtJ_G0028321.1 mouse_genomes_project 4 118309243 118419735 - MGP_NODShiLtJ_P0066259 Prkaa2 protein_coding protein_coding MGP_NODShiLtJ_T0068086.1 MGP_NODShiLtJ_G0028714.1 mouse_genomes_project 4 149534531 149546917 - Cd52 protein_coding processed_transcript MGP_NODShiLtJ_T0068089.1 MGP_NODShiLtJ_G0028714.1 mouse_genomes_project 4 149545411 149546958 - MGP_NODShiLtJ_P0068089 Cd52 protein_coding protein_coding MGP_NODShiLtJ_T0068090.1 MGP_NODShiLtJ_G0028714.1 mouse_genomes_project 4 149545951 149546914 - Cd52 protein_coding processed_transcript MGP_NODShiLtJ_T0014350.1 MGP_NODShiLtJ_G0012458.1 mouse_genomes_project 4 30042563 30044354 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014607.1 MGP_NODShiLtJ_G0012715.1 mouse_genomes_project 4 131574025 131574604 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067217.1 MGP_NODShiLtJ_G0028523.1 mouse_genomes_project 4 135087949 135104235 - MGP_NODShiLtJ_P0067217 Zfp69 protein_coding protein_coding MGP_NODShiLtJ_T0067218.1 MGP_NODShiLtJ_G0028523.1 mouse_genomes_project 4 135088165 135101966 - MGP_NODShiLtJ_P0067218 Zfp69 protein_coding protein_coding MGP_NODShiLtJ_T0067219.1 MGP_NODShiLtJ_G0028523.1 mouse_genomes_project 4 135089118 135099338 - MGP_NODShiLtJ_P0067219 Zfp69 protein_coding protein_coding MGP_NODShiLtJ_T0067220.1 MGP_NODShiLtJ_G0028523.1 mouse_genomes_project 4 135089119 135092513 - Zfp69 protein_coding retained_intron MGP_NODShiLtJ_T0014561.1 MGP_NODShiLtJ_G0012669.1 mouse_genomes_project 4 114961796 114962815 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067163.1 MGP_NODShiLtJ_G0028510.1 mouse_genomes_project 4 133734194 133738417 - MGP_NODShiLtJ_P0067163 Guca2b protein_coding protein_coding MGP_NODShiLtJ_T0067164.1 MGP_NODShiLtJ_G0028510.1 mouse_genomes_project 4 133734194 133738590 - MGP_NODShiLtJ_P0067164 Guca2b protein_coding protein_coding MGP_NODShiLtJ_T0068899.1 MGP_NODShiLtJ_G0028931.1 mouse_genomes_project 4 165753802 165756930 + MGP_NODShiLtJ_P0068899 Srm protein_coding protein_coding MGP_NODShiLtJ_T0068900.1 MGP_NODShiLtJ_G0028931.1 mouse_genomes_project 4 165754216 165756505 + Srm protein_coding retained_intron MGP_NODShiLtJ_T0068901.1 MGP_NODShiLtJ_G0028931.1 mouse_genomes_project 4 165756199 165757304 + Srm protein_coding processed_transcript MGP_NODShiLtJ_T0068798.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161702039 161934238 - MGP_NODShiLtJ_P0068798 Vps13d protein_coding protein_coding MGP_NODShiLtJ_T0068799.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161702044 161929892 - MGP_NODShiLtJ_P0068799 Vps13d protein_coding protein_coding MGP_NODShiLtJ_T0068800.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161702044 161822612 - MGP_NODShiLtJ_P0068800 Vps13d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068801.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161704012 161891155 - MGP_NODShiLtJ_P0068801 Vps13d protein_coding protein_coding MGP_NODShiLtJ_T0068802.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161704342 161713382 - Vps13d protein_coding processed_transcript MGP_NODShiLtJ_T0068803.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161709723 161784773 - Vps13d protein_coding retained_intron MGP_NODShiLtJ_T0068804.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161746310 161781662 - Vps13d protein_coding processed_transcript MGP_NODShiLtJ_T0068805.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161783609 161788857 - Vps13d protein_coding retained_intron MGP_NODShiLtJ_T0068806.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161800621 161803257 - Vps13d protein_coding retained_intron MGP_NODShiLtJ_T0068807.1 MGP_NODShiLtJ_G0028906.1 mouse_genomes_project 4 161913184 161934228 - Vps13d protein_coding retained_intron MGP_NODShiLtJ_T0014669.1 MGP_NODShiLtJ_G0012777.1 mouse_genomes_project 4 150854357 150854667 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014617.1 MGP_NODShiLtJ_G0012725.1 mouse_genomes_project 4 133548001 133548415 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068014.1 MGP_NODShiLtJ_G0028698.1 mouse_genomes_project 4 148803713 148811567 + MGP_NODShiLtJ_P0068014 Fam46b protein_coding protein_coding MGP_NODShiLtJ_T0064616.1 MGP_NODShiLtJ_G0027930.1 mouse_genomes_project 4 35318134 35332788 + MGP_NODShiLtJ_P0064616 Ube2j1 protein_coding protein_coding MGP_NODShiLtJ_T0064617.1 MGP_NODShiLtJ_G0027930.1 mouse_genomes_project 4 35318192 35339887 + MGP_NODShiLtJ_P0064617 Ube2j1 protein_coding protein_coding MGP_NODShiLtJ_T0014695.1 MGP_NODShiLtJ_G0012803.1 mouse_genomes_project 4 160258400 160258629 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100545.1 MGP_NODShiLtJ_G0038939.1 mouse_genomes_project 4 62799724 62799856 - Gm25053 snoRNA snoRNA MGP_NODShiLtJ_T0014336.1 MGP_NODShiLtJ_G0012444.1 mouse_genomes_project 4 25786853 25787673 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065022.1 MGP_NODShiLtJ_G0028017.1 mouse_genomes_project 4 47819922 47824646 + MGP_NODShiLtJ_P0065022 Creb3 protein_coding protein_coding MGP_NODShiLtJ_T0065023.1 MGP_NODShiLtJ_G0028017.1 mouse_genomes_project 4 47820402 47824383 + MGP_NODShiLtJ_P0065023 Creb3 protein_coding protein_coding MGP_NODShiLtJ_T0065024.1 MGP_NODShiLtJ_G0028017.1 mouse_genomes_project 4 47820536 47822903 + MGP_NODShiLtJ_P0065024 Creb3 protein_coding protein_coding MGP_NODShiLtJ_T0065025.1 MGP_NODShiLtJ_G0028017.1 mouse_genomes_project 4 47820860 47824113 + Creb3 protein_coding retained_intron MGP_NODShiLtJ_T0065026.1 MGP_NODShiLtJ_G0028017.1 mouse_genomes_project 4 47821022 47823137 + Creb3 protein_coding retained_intron MGP_NODShiLtJ_T0065027.1 MGP_NODShiLtJ_G0028017.1 mouse_genomes_project 4 47823600 47824290 + Creb3 protein_coding retained_intron MGP_NODShiLtJ_T0065375.1 MGP_NODShiLtJ_G0028100.1 mouse_genomes_project 4 58423222 58424281 - MGP_NODShiLtJ_P0065375 Olfr273 protein_coding protein_coding MGP_NODShiLtJ_T0065376.1 MGP_NODShiLtJ_G0028100.1 mouse_genomes_project 4 58423266 58427153 - MGP_NODShiLtJ_P0065376 Olfr273 protein_coding protein_coding MGP_NODShiLtJ_T0066060.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111192640 111204916 + Inadl protein_coding processed_transcript MGP_NODShiLtJ_T0066061.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111192646 111533203 + MGP_NODShiLtJ_P0066061 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0066062.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111192710 111480838 + MGP_NODShiLtJ_P0066062 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0066063.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111192710 111359725 + MGP_NODShiLtJ_P0066063 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0066064.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111192747 111258775 + MGP_NODShiLtJ_P0066064 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0066065.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111217158 111232418 + Inadl protein_coding processed_transcript MGP_NODShiLtJ_T0066066.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111237499 111242218 + Inadl protein_coding processed_transcript MGP_NODShiLtJ_T0066067.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111242156 111303711 + MGP_NODShiLtJ_P0066067 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0066068.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111253274 111531958 + MGP_NODShiLtJ_P0066068 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0066069.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111301135 111314242 + Inadl protein_coding processed_transcript MGP_NODShiLtJ_T0066070.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111330207 111344282 + MGP_NODShiLtJ_P0066070 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0066071.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111351805 111533203 + MGP_NODShiLtJ_P0066071 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0066072.1 MGP_NODShiLtJ_G0028280.1 mouse_genomes_project 4 111352044 111495391 + MGP_NODShiLtJ_P0066072 Inadl protein_coding protein_coding MGP_NODShiLtJ_T0004531.1 MGP_NODShiLtJ_G0003930.1 mouse_genomes_project 4 166156481 166157904 - Gm13205 antisense antisense MGP_NODShiLtJ_T0065560.1 MGP_NODShiLtJ_G0028153.1 mouse_genomes_project 4 68527110 68539670 - MGP_NODShiLtJ_P0065560 Mup21 protein_coding protein_coding MGP_NODShiLtJ_T0065795.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94050227 94094165 + MGP_NODShiLtJ_P0065795 Snapc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065796.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94050227 94085843 + MGP_NODShiLtJ_P0065796 Snapc3 protein_coding protein_coding MGP_NODShiLtJ_T0065797.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94050234 94074592 + MGP_NODShiLtJ_P0065797 Snapc3 protein_coding protein_coding MGP_NODShiLtJ_T0065798.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94050247 94086536 + MGP_NODShiLtJ_P0065798 Snapc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065799.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94050247 94100697 + MGP_NODShiLtJ_P0065799 Snapc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065800.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94050252 94101154 + MGP_NODShiLtJ_P0065800 Snapc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065801.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94086308 94100644 + Snapc3 protein_coding processed_transcript MGP_NODShiLtJ_T0065802.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94086456 94099182 + Snapc3 protein_coding processed_transcript MGP_NODShiLtJ_T0065808.1 MGP_NODShiLtJ_G0028212.1 mouse_genomes_project 4 94097060 94100689 + Snapc3 protein_coding retained_intron MGP_NODShiLtJ_T0014273.1 MGP_NODShiLtJ_G0012381.1 mouse_genomes_project 4 5366561 5367021 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014535.1 MGP_NODShiLtJ_G0012643.1 mouse_genomes_project 4 106116204 106116462 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004553.1 MGP_NODShiLtJ_G0003947.1 mouse_genomes_project 4 172430541 172437694 + Gm13111 antisense antisense MGP_NODShiLtJ_T0068177.1 MGP_NODShiLtJ_G0028736.1 mouse_genomes_project 4 150082889 150235844 - MGP_NODShiLtJ_P0068177 Man1c1 protein_coding protein_coding MGP_NODShiLtJ_T0068178.1 MGP_NODShiLtJ_G0028736.1 mouse_genomes_project 4 150082889 150235844 - MGP_NODShiLtJ_P0068178 Man1c1 protein_coding protein_coding MGP_NODShiLtJ_T0068179.1 MGP_NODShiLtJ_G0028736.1 mouse_genomes_project 4 150089085 150235321 - Man1c1 protein_coding retained_intron MGP_NODShiLtJ_T0068341.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152213653 152272612 - MGP_NODShiLtJ_P0068341 Kdm1a protein_coding protein_coding MGP_NODShiLtJ_T0068342.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152213657 152272576 - MGP_NODShiLtJ_P0068342 Kdm1a protein_coding protein_coding MGP_NODShiLtJ_T0068343.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152213963 152272197 - MGP_NODShiLtJ_P0068343 Kdm1a protein_coding protein_coding MGP_NODShiLtJ_T0068344.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152213992 152215654 - Kdm1a protein_coding retained_intron MGP_NODShiLtJ_T0068345.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152214987 152216284 - Kdm1a protein_coding retained_intron MGP_NODShiLtJ_T0068346.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152216232 152218444 - Kdm1a protein_coding retained_intron MGP_NODShiLtJ_T0068347.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152218326 152224418 - Kdm1a protein_coding retained_intron MGP_NODShiLtJ_T0068348.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152218354 152231523 - MGP_NODShiLtJ_P0068348 Kdm1a protein_coding protein_coding MGP_NODShiLtJ_T0068349.1 MGP_NODShiLtJ_G0028773.1 mouse_genomes_project 4 152221449 152242305 - MGP_NODShiLtJ_P0068349 Kdm1a protein_coding protein_coding MGP_NODShiLtJ_T0065209.1 MGP_NODShiLtJ_G0028055.1 mouse_genomes_project 4 50309566 50353340 + MGP_NODShiLtJ_P0065209 Stra6l protein_coding protein_coding MGP_NODShiLtJ_T0065210.1 MGP_NODShiLtJ_G0028055.1 mouse_genomes_project 4 50309718 50353340 + MGP_NODShiLtJ_P0065210 Stra6l protein_coding protein_coding MGP_NODShiLtJ_T0065211.1 MGP_NODShiLtJ_G0028055.1 mouse_genomes_project 4 50309849 50353340 + MGP_NODShiLtJ_P0065211 Stra6l protein_coding protein_coding MGP_NODShiLtJ_T0065212.1 MGP_NODShiLtJ_G0028055.1 mouse_genomes_project 4 50309899 50322537 + Stra6l protein_coding processed_transcript MGP_NODShiLtJ_T0065213.1 MGP_NODShiLtJ_G0028055.1 mouse_genomes_project 4 50339263 50352950 + Stra6l protein_coding retained_intron MGP_NODShiLtJ_T0067209.1 MGP_NODShiLtJ_G0028521.1 mouse_genomes_project 4 135010030 135039400 + Rims3 protein_coding processed_transcript MGP_NODShiLtJ_T0067210.1 MGP_NODShiLtJ_G0028521.1 mouse_genomes_project 4 135010033 135052228 + MGP_NODShiLtJ_P0067210 Rims3 protein_coding protein_coding MGP_NODShiLtJ_T0067211.1 MGP_NODShiLtJ_G0028521.1 mouse_genomes_project 4 135016965 135052228 + MGP_NODShiLtJ_P0067211 Rims3 protein_coding protein_coding MGP_NODShiLtJ_T0067212.1 MGP_NODShiLtJ_G0028521.1 mouse_genomes_project 4 135032779 135047209 + MGP_NODShiLtJ_P0067212 Rims3 protein_coding protein_coding MGP_NODShiLtJ_T0066290.1 MGP_NODShiLtJ_G0028332.1 mouse_genomes_project 4 120101279 120151679 - MGP_NODShiLtJ_P0066290 Mroh7 protein_coding protein_coding MGP_NODShiLtJ_T0066291.1 MGP_NODShiLtJ_G0028332.1 mouse_genomes_project 4 120101286 120132534 - Mroh7 protein_coding processed_transcript MGP_NODShiLtJ_T0066292.1 MGP_NODShiLtJ_G0028332.1 mouse_genomes_project 4 120101286 120131050 - Mroh7 protein_coding retained_intron MGP_NODShiLtJ_T0066293.1 MGP_NODShiLtJ_G0028332.1 mouse_genomes_project 4 120101499 120132217 - Mroh7 protein_coding processed_transcript MGP_NODShiLtJ_T0066294.1 MGP_NODShiLtJ_G0028332.1 mouse_genomes_project 4 120111623 120122457 - Mroh7 protein_coding processed_transcript MGP_NODShiLtJ_T0066295.1 MGP_NODShiLtJ_G0028332.1 mouse_genomes_project 4 120130991 120151725 - MGP_NODShiLtJ_P0066295 Mroh7 protein_coding protein_coding MGP_NODShiLtJ_T0066296.1 MGP_NODShiLtJ_G0028332.1 mouse_genomes_project 4 120145174 120154666 - MGP_NODShiLtJ_P0066296 Mroh7 protein_coding protein_coding MGP_NODShiLtJ_T0064519.1 MGP_NODShiLtJ_G0027909.1 mouse_genomes_project 4 21528214 21596280 + Faxc protein_coding processed_transcript MGP_NODShiLtJ_T0064520.1 MGP_NODShiLtJ_G0027909.1 mouse_genomes_project 4 21528216 21596885 + MGP_NODShiLtJ_P0064520 Faxc protein_coding protein_coding MGP_NODShiLtJ_T0064521.1 MGP_NODShiLtJ_G0027909.1 mouse_genomes_project 4 21528218 21550168 + Faxc protein_coding processed_transcript MGP_NODShiLtJ_T0064522.1 MGP_NODShiLtJ_G0027909.1 mouse_genomes_project 4 21528242 21598972 + Faxc protein_coding processed_transcript MGP_NODShiLtJ_T0064523.1 MGP_NODShiLtJ_G0027909.1 mouse_genomes_project 4 21559686 21562038 + Faxc protein_coding processed_transcript MGP_NODShiLtJ_T0066995.1 MGP_NODShiLtJ_G0028466.1 mouse_genomes_project 4 131766194 131772375 - Ipo13 protein_coding processed_transcript MGP_NODShiLtJ_T0066996.1 MGP_NODShiLtJ_G0028466.1 mouse_genomes_project 4 131766194 131786339 - MGP_NODShiLtJ_P0066996 Ipo13 protein_coding protein_coding MGP_NODShiLtJ_T0066997.1 MGP_NODShiLtJ_G0028466.1 mouse_genomes_project 4 131766335 131766823 - Ipo13 protein_coding processed_transcript MGP_NODShiLtJ_T0066998.1 MGP_NODShiLtJ_G0028466.1 mouse_genomes_project 4 131766600 131767583 - Ipo13 protein_coding processed_transcript MGP_NODShiLtJ_T0066999.1 MGP_NODShiLtJ_G0028466.1 mouse_genomes_project 4 131767048 131767602 - Ipo13 protein_coding processed_transcript MGP_NODShiLtJ_T0067000.1 MGP_NODShiLtJ_G0028466.1 mouse_genomes_project 4 131772667 131775580 - Ipo13 protein_coding processed_transcript MGP_NODShiLtJ_T0064464.1 MGP_NODShiLtJ_G0027894.1 mouse_genomes_project 4 18730838 18787799 - MGP_NODShiLtJ_P0064464 Cpne3 protein_coding protein_coding MGP_NODShiLtJ_T0064465.1 MGP_NODShiLtJ_G0027894.1 mouse_genomes_project 4 18752689 18755757 - Cpne3 protein_coding processed_transcript MGP_NODShiLtJ_T0064466.1 MGP_NODShiLtJ_G0027894.1 mouse_genomes_project 4 18764071 18787774 - Cpne3 protein_coding retained_intron MGP_NODShiLtJ_T0007896.1 MGP_NODShiLtJ_G0006445.1 mouse_genomes_project 4 144179666 144181486 + Gm15906 lincRNA lincRNA MGP_NODShiLtJ_T0014713.1 MGP_NODShiLtJ_G0012821.1 mouse_genomes_project 4 167112285 167112426 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007810.1 MGP_NODShiLtJ_G0006381.1 mouse_genomes_project 4 92550402 92583826 - Gm11264 lincRNA lincRNA MGP_NODShiLtJ_T0069477.1 MGP_NODShiLtJ_G0029029.1 mouse_genomes_project 4 173633664 173640247 - MGP_NODShiLtJ_P0069477 Vwa1 protein_coding protein_coding MGP_NODShiLtJ_T0101916.1 MGP_NODShiLtJ_G0040084.1 mouse_genomes_project 4 108709673 108709879 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0067699.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144703064 144704202 - Ccdc28b protein_coding processed_transcript MGP_NODShiLtJ_T0067700.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144703064 144707534 - MGP_NODShiLtJ_P0067700 Ccdc28b protein_coding protein_coding MGP_NODShiLtJ_T0067701.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144703065 144704525 - Ccdc28b protein_coding retained_intron MGP_NODShiLtJ_T0067702.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144703066 144705031 - Ccdc28b protein_coding processed_transcript MGP_NODShiLtJ_T0067703.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144703066 144707424 - MGP_NODShiLtJ_P0067703 Ccdc28b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067704.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144704085 144707465 - MGP_NODShiLtJ_P0067704 Ccdc28b protein_coding protein_coding MGP_NODShiLtJ_T0067705.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144704358 144706312 - Ccdc28b protein_coding processed_transcript MGP_NODShiLtJ_T0067706.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144704612 144707473 - MGP_NODShiLtJ_P0067706 Ccdc28b protein_coding protein_coding MGP_NODShiLtJ_T0067707.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144705764 144707431 - Ccdc28b protein_coding retained_intron MGP_NODShiLtJ_T0067708.1 MGP_NODShiLtJ_G0028638.1 mouse_genomes_project 4 144706886 144707486 - Ccdc28b protein_coding retained_intron MGP_NODShiLtJ_T0014300.1 MGP_NODShiLtJ_G0012408.1 mouse_genomes_project 4 13888419 13900779 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065670.1 MGP_NODShiLtJ_G0028181.1 mouse_genomes_project 4 70193739 70195832 - Gm11214 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0065671.1 MGP_NODShiLtJ_G0028181.1 mouse_genomes_project 4 70193739 70194291 - MGP_NODShiLtJ_P0065671 Gm11214 protein_coding protein_coding MGP_NODShiLtJ_T0004489.1 MGP_NODShiLtJ_G0003897.1 mouse_genomes_project 4 147696339 147702451 - Gm12981 antisense antisense MGP_NODShiLtJ_T0065994.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108057013 108443635 + MGP_NODShiLtJ_P0065994 Fggy protein_coding protein_coding MGP_NODShiLtJ_T0065995.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108057017 108347490 + Fggy protein_coding processed_transcript MGP_NODShiLtJ_T0065996.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108057025 108443631 + Fggy protein_coding processed_transcript MGP_NODShiLtJ_T0065997.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108057026 108096568 + MGP_NODShiLtJ_P0065997 Fggy protein_coding protein_coding MGP_NODShiLtJ_T0065998.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108078850 108329524 + MGP_NODShiLtJ_P0065998 Fggy protein_coding protein_coding MGP_NODShiLtJ_T0065999.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108078913 108099965 + Fggy protein_coding processed_transcript MGP_NODShiLtJ_T0066000.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108078918 108096574 + MGP_NODShiLtJ_P0066000 Fggy protein_coding protein_coding MGP_NODShiLtJ_T0066001.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108078923 108276622 + MGP_NODShiLtJ_P0066001 Fggy protein_coding protein_coding MGP_NODShiLtJ_T0066002.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108084983 108443500 + MGP_NODShiLtJ_P0066002 Fggy protein_coding protein_coding MGP_NODShiLtJ_T0066003.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108084983 108320047 + MGP_NODShiLtJ_P0066003 Fggy protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066004.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108086654 108240882 + Fggy protein_coding processed_transcript MGP_NODShiLtJ_T0066005.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108123281 108391966 + Fggy protein_coding processed_transcript MGP_NODShiLtJ_T0066006.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108123288 108240939 + MGP_NODShiLtJ_P0066006 Fggy protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066007.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108136500 108329937 + Fggy protein_coding processed_transcript MGP_NODShiLtJ_T0066008.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108240424 108276631 + Fggy protein_coding processed_transcript MGP_NODShiLtJ_T0066009.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108276694 108443635 + MGP_NODShiLtJ_P0066009 Fggy protein_coding protein_coding MGP_NODShiLtJ_T0066010.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108329932 108443500 + MGP_NODShiLtJ_P0066010 Fggy protein_coding protein_coding MGP_NODShiLtJ_T0066011.1 MGP_NODShiLtJ_G0028265.1 mouse_genomes_project 4 108356467 108443630 + MGP_NODShiLtJ_P0066011 Fggy protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069400.1 MGP_NODShiLtJ_G0029016.1 mouse_genomes_project 4 173215487 173229555 - Gabrd protein_coding processed_transcript MGP_NODShiLtJ_T0069401.1 MGP_NODShiLtJ_G0029016.1 mouse_genomes_project 4 173215487 173229620 - MGP_NODShiLtJ_P0069401 Gabrd protein_coding protein_coding MGP_NODShiLtJ_T0069402.1 MGP_NODShiLtJ_G0029016.1 mouse_genomes_project 4 173219073 173229544 - Gabrd protein_coding processed_transcript MGP_NODShiLtJ_T0007894.1 MGP_NODShiLtJ_G0006443.1 mouse_genomes_project 4 143859521 143890955 + Gm12968 lincRNA lincRNA MGP_NODShiLtJ_T0007746.1 MGP_NODShiLtJ_G0006325.1 mouse_genomes_project 4 12097807 12112909 - 1700120G11Rik lincRNA lincRNA MGP_NODShiLtJ_T0001383.1 MGP_NODShiLtJ_G0001303.1 mouse_genomes_project 4 112169702 112172165 + TEC TEC MGP_NODShiLtJ_T0014606.1 MGP_NODShiLtJ_G0012714.1 mouse_genomes_project 4 131574022 131574604 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067646.1 MGP_NODShiLtJ_G0028629.1 mouse_genomes_project 4 144572236 144573003 + MGP_NODShiLtJ_P0067646 Fam229a protein_coding protein_coding MGP_NODShiLtJ_T0067647.1 MGP_NODShiLtJ_G0028629.1 mouse_genomes_project 4 144572286 144573003 + Fam229a protein_coding retained_intron MGP_NODShiLtJ_T0100577.1 MGP_NODShiLtJ_G0038971.1 mouse_genomes_project 4 135711777 135711909 + Gm26162 snoRNA snoRNA MGP_NODShiLtJ_T0069514.1 MGP_NODShiLtJ_G0029037.1 mouse_genomes_project 4 173735221 173739301 - MGP_NODShiLtJ_P0069514 Tas1r3 protein_coding protein_coding MGP_NODShiLtJ_T0007917.1 MGP_NODShiLtJ_G0006459.1 mouse_genomes_project 4 147419844 147420002 + Gm28872 lincRNA lincRNA MGP_NODShiLtJ_T0014527.1 MGP_NODShiLtJ_G0012635.1 mouse_genomes_project 4 102712326 102712932 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004417.1 MGP_NODShiLtJ_G0003847.1 mouse_genomes_project 4 107526644 107544765 + Junos antisense antisense MGP_NODShiLtJ_T0004418.1 MGP_NODShiLtJ_G0003847.1 mouse_genomes_project 4 107529367 107538070 + Junos antisense antisense MGP_NODShiLtJ_T0004419.1 MGP_NODShiLtJ_G0003847.1 mouse_genomes_project 4 107529656 107642217 + Junos antisense antisense MGP_NODShiLtJ_T0004420.1 MGP_NODShiLtJ_G0003847.1 mouse_genomes_project 4 107552997 107639406 + Junos antisense antisense MGP_NODShiLtJ_T0004421.1 MGP_NODShiLtJ_G0003847.1 mouse_genomes_project 4 107553144 107617102 + Junos antisense antisense MGP_NODShiLtJ_T0004422.1 MGP_NODShiLtJ_G0003847.1 mouse_genomes_project 4 107570865 107644163 + Junos antisense antisense MGP_NODShiLtJ_T0004423.1 MGP_NODShiLtJ_G0003847.1 mouse_genomes_project 4 107576018 107648830 + Junos antisense antisense MGP_NODShiLtJ_T0004424.1 MGP_NODShiLtJ_G0003847.1 mouse_genomes_project 4 107602404 107650231 + Junos antisense antisense MGP_NODShiLtJ_T0067521.1 MGP_NODShiLtJ_G0028599.1 mouse_genomes_project 4 142145926 142149929 + MGP_NODShiLtJ_P0067521 Smim12 protein_coding protein_coding MGP_NODShiLtJ_T0069128.1 MGP_NODShiLtJ_G0028969.1 mouse_genomes_project 4 169520638 169527580 - MGP_NODShiLtJ_P0069128 Thap3 protein_coding protein_coding MGP_NODShiLtJ_T0069129.1 MGP_NODShiLtJ_G0028969.1 mouse_genomes_project 4 169520801 169527553 - MGP_NODShiLtJ_P0069129 Thap3 protein_coding protein_coding MGP_NODShiLtJ_T0069130.1 MGP_NODShiLtJ_G0028969.1 mouse_genomes_project 4 169523458 169527563 - Thap3 protein_coding retained_intron MGP_NODShiLtJ_T0014271.1 MGP_NODShiLtJ_G0012379.1 mouse_genomes_project 4 3523282 3524028 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014450.1 MGP_NODShiLtJ_G0012558.1 mouse_genomes_project 4 65472204 65472924 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066111.1 MGP_NODShiLtJ_G0028290.1 mouse_genomes_project 4 112662737 112678470 + Alg6 protein_coding retained_intron MGP_NODShiLtJ_T0066112.1 MGP_NODShiLtJ_G0028290.1 mouse_genomes_project 4 112662738 112705495 + Alg6 protein_coding retained_intron MGP_NODShiLtJ_T0066113.1 MGP_NODShiLtJ_G0028290.1 mouse_genomes_project 4 112662738 112707557 + MGP_NODShiLtJ_P0066113 Alg6 protein_coding protein_coding MGP_NODShiLtJ_T0066114.1 MGP_NODShiLtJ_G0028290.1 mouse_genomes_project 4 112662749 112687978 + Alg6 protein_coding processed_transcript MGP_NODShiLtJ_T0066115.1 MGP_NODShiLtJ_G0028290.1 mouse_genomes_project 4 112662749 112696258 + MGP_NODShiLtJ_P0066115 Alg6 protein_coding protein_coding MGP_NODShiLtJ_T0066116.1 MGP_NODShiLtJ_G0028290.1 mouse_genomes_project 4 112662749 112696067 + MGP_NODShiLtJ_P0066116 Alg6 protein_coding protein_coding MGP_NODShiLtJ_T0066117.1 MGP_NODShiLtJ_G0028290.1 mouse_genomes_project 4 112667412 112681018 + Alg6 protein_coding retained_intron MGP_NODShiLtJ_T0065555.1 MGP_NODShiLtJ_G0028149.1 mouse_genomes_project 4 66107158 66138961 - MGP_NODShiLtJ_P0065555 Mup4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0017899.1 MGP_NODShiLtJ_G0015412.1 mouse_genomes_project 4 50219933 50221780 - Gm12409 processed_transcript processed_transcript MGP_NODShiLtJ_T0065803.1 MGP_NODShiLtJ_G0028213.1 mouse_genomes_project 4 94088182 94120990 - MGP_NODShiLtJ_P0065803 Psip1 protein_coding protein_coding MGP_NODShiLtJ_T0065804.1 MGP_NODShiLtJ_G0028213.1 mouse_genomes_project 4 94090577 94092622 - Psip1 protein_coding retained_intron MGP_NODShiLtJ_T0065805.1 MGP_NODShiLtJ_G0028213.1 mouse_genomes_project 4 94095043 94120989 - MGP_NODShiLtJ_P0065805 Psip1 protein_coding protein_coding MGP_NODShiLtJ_T0065806.1 MGP_NODShiLtJ_G0028213.1 mouse_genomes_project 4 94095043 94120984 - MGP_NODShiLtJ_P0065806 Psip1 protein_coding protein_coding MGP_NODShiLtJ_T0065807.1 MGP_NODShiLtJ_G0028213.1 mouse_genomes_project 4 94095914 94098098 - Psip1 protein_coding retained_intron MGP_NODShiLtJ_T0065809.1 MGP_NODShiLtJ_G0028213.1 mouse_genomes_project 4 94109775 94120709 - MGP_NODShiLtJ_P0065809 Psip1 protein_coding protein_coding MGP_NODShiLtJ_T0014281.1 MGP_NODShiLtJ_G0012389.1 mouse_genomes_project 4 8212314 8213500 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068951.1 MGP_NODShiLtJ_G0028938.1 mouse_genomes_project 4 166359901 166361626 - MGP_NODShiLtJ_P0068951 Cort protein_coding protein_coding MGP_NODShiLtJ_T0001394.1 MGP_NODShiLtJ_G0001314.1 mouse_genomes_project 4 156442698 156445345 - TEC TEC MGP_NODShiLtJ_T0014573.1 MGP_NODShiLtJ_G0012681.1 mouse_genomes_project 4 120211054 120211268 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007734.1 MGP_NODShiLtJ_G0006317.1 mouse_genomes_project 4 7821858 8129940 - lincRNA lincRNA MGP_NODShiLtJ_T0007735.1 MGP_NODShiLtJ_G0006317.1 mouse_genomes_project 4 7846262 8194534 - lincRNA lincRNA MGP_NODShiLtJ_T0007736.1 MGP_NODShiLtJ_G0006317.1 mouse_genomes_project 4 8132749 8194518 - lincRNA lincRNA MGP_NODShiLtJ_T0007737.1 MGP_NODShiLtJ_G0006317.1 mouse_genomes_project 4 8133025 8194521 - lincRNA lincRNA MGP_NODShiLtJ_T0067271.1 MGP_NODShiLtJ_G0028541.1 mouse_genomes_project 4 137670376 137685151 + MGP_NODShiLtJ_P0067271 Nt5c1a protein_coding protein_coding MGP_NODShiLtJ_T0099268.1 MGP_NODShiLtJ_G0037662.1 mouse_genomes_project 4 70102166 70102273 - Gm24448 snRNA snRNA MGP_NODShiLtJ_T0067850.1 MGP_NODShiLtJ_G0028664.1 mouse_genomes_project 4 147039806 147041176 + MGP_NODShiLtJ_P0067850 Tmem200b protein_coding protein_coding MGP_NODShiLtJ_T0099286.1 MGP_NODShiLtJ_G0037680.1 mouse_genomes_project 4 121566718 121566822 - Gm23354 snRNA snRNA MGP_NODShiLtJ_T0069143.1 MGP_NODShiLtJ_G0028974.1 mouse_genomes_project 4 169581968 169595857 + Nol9 protein_coding retained_intron MGP_NODShiLtJ_T0069144.1 MGP_NODShiLtJ_G0028974.1 mouse_genomes_project 4 169581974 169604378 + MGP_NODShiLtJ_P0069144 Nol9 protein_coding protein_coding MGP_NODShiLtJ_T0069145.1 MGP_NODShiLtJ_G0028974.1 mouse_genomes_project 4 169581983 169600022 + Nol9 protein_coding retained_intron MGP_NODShiLtJ_T0069146.1 MGP_NODShiLtJ_G0028974.1 mouse_genomes_project 4 169581983 169605848 + MGP_NODShiLtJ_P0069146 Nol9 protein_coding protein_coding MGP_NODShiLtJ_T0069147.1 MGP_NODShiLtJ_G0028974.1 mouse_genomes_project 4 169582010 169604396 + MGP_NODShiLtJ_P0069147 Nol9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014611.1 MGP_NODShiLtJ_G0012719.1 mouse_genomes_project 4 132351423 132351631 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007833.1 MGP_NODShiLtJ_G0006399.1 mouse_genomes_project 4 107903611 107904424 - Gm29064 lincRNA lincRNA MGP_NODShiLtJ_T0004404.1 MGP_NODShiLtJ_G0003835.1 mouse_genomes_project 4 68488737 68496718 + Gm12910 antisense antisense MGP_NODShiLtJ_T0099324.1 MGP_NODShiLtJ_G0037718.1 mouse_genomes_project 4 165714840 165714948 + Gm23318 snRNA snRNA MGP_NODShiLtJ_T0069493.1 MGP_NODShiLtJ_G0029034.1 mouse_genomes_project 4 173701239 173702699 + MGP_NODShiLtJ_P0069493 Aurkaip1 protein_coding protein_coding MGP_NODShiLtJ_T0069494.1 MGP_NODShiLtJ_G0029034.1 mouse_genomes_project 4 173701318 173705309 + MGP_NODShiLtJ_P0069494 Aurkaip1 protein_coding protein_coding MGP_NODShiLtJ_T0069495.1 MGP_NODShiLtJ_G0029034.1 mouse_genomes_project 4 173701580 173702425 + Aurkaip1 protein_coding retained_intron MGP_NODShiLtJ_T0069496.1 MGP_NODShiLtJ_G0029034.1 mouse_genomes_project 4 173701620 173703022 + MGP_NODShiLtJ_P0069496 Aurkaip1 protein_coding protein_coding MGP_NODShiLtJ_T0069497.1 MGP_NODShiLtJ_G0029034.1 mouse_genomes_project 4 173701626 173702489 + Aurkaip1 protein_coding processed_transcript MGP_NODShiLtJ_T0069498.1 MGP_NODShiLtJ_G0029034.1 mouse_genomes_project 4 173701630 173702992 + MGP_NODShiLtJ_P0069498 Aurkaip1 protein_coding protein_coding MGP_NODShiLtJ_T0007770.1 MGP_NODShiLtJ_G0006348.1 mouse_genomes_project 4 50137517 50149394 + Gm829 lincRNA lincRNA MGP_NODShiLtJ_T0007771.1 MGP_NODShiLtJ_G0006348.1 mouse_genomes_project 4 50137517 50180112 + Gm829 lincRNA lincRNA MGP_NODShiLtJ_T0010554.1 MGP_NODShiLtJ_G0008687.1 mouse_genomes_project 4 173945526 173945616 - Mir200a miRNA miRNA MGP_NODShiLtJ_T0100564.1 MGP_NODShiLtJ_G0038958.1 mouse_genomes_project 4 106896802 106896903 + Gm22804 snoRNA snoRNA MGP_NODShiLtJ_T0065931.1 MGP_NODShiLtJ_G0028241.1 mouse_genomes_project 4 99814189 99816209 + MGP_NODShiLtJ_P0065931 Gm26566 protein_coding protein_coding MGP_NODShiLtJ_T0068015.1 MGP_NODShiLtJ_G0028699.1 mouse_genomes_project 4 148815380 148822996 - MGP_NODShiLtJ_P0068015 Trnp1 protein_coding protein_coding MGP_NODShiLtJ_T0068016.1 MGP_NODShiLtJ_G0028699.1 mouse_genomes_project 4 148815398 148822165 - Trnp1 protein_coding processed_transcript MGP_NODShiLtJ_T0068277.1 MGP_NODShiLtJ_G0028759.1 mouse_genomes_project 4 151583384 151589940 + MGP_NODShiLtJ_P0068277 Gale protein_coding protein_coding MGP_NODShiLtJ_T0068278.1 MGP_NODShiLtJ_G0028759.1 mouse_genomes_project 4 151583414 151585287 + MGP_NODShiLtJ_P0068278 Gale protein_coding protein_coding MGP_NODShiLtJ_T0068279.1 MGP_NODShiLtJ_G0028759.1 mouse_genomes_project 4 151583417 151586523 + Gale protein_coding retained_intron MGP_NODShiLtJ_T0068280.1 MGP_NODShiLtJ_G0028759.1 mouse_genomes_project 4 151583474 151585277 + MGP_NODShiLtJ_P0068280 Gale protein_coding protein_coding MGP_NODShiLtJ_T0068281.1 MGP_NODShiLtJ_G0028759.1 mouse_genomes_project 4 151584822 151589940 + MGP_NODShiLtJ_P0068281 Gale protein_coding protein_coding MGP_NODShiLtJ_T0068282.1 MGP_NODShiLtJ_G0028759.1 mouse_genomes_project 4 151584852 151586577 + Gale protein_coding retained_intron MGP_NODShiLtJ_T0068283.1 MGP_NODShiLtJ_G0028759.1 mouse_genomes_project 4 151585276 151589465 + Gale protein_coding retained_intron MGP_NODShiLtJ_T0066256.1 MGP_NODShiLtJ_G0028319.1 mouse_genomes_project 4 118127531 118129298 + MGP_NODShiLtJ_P0066256 Gm17662 protein_coding protein_coding MGP_NODShiLtJ_T0014326.1 MGP_NODShiLtJ_G0012434.1 mouse_genomes_project 4 22192534 22193106 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065527.1 MGP_NODShiLtJ_G0028142.1 mouse_genomes_project 4 65422881 65424165 - Susd1 protein_coding retained_intron MGP_NODShiLtJ_T0065528.1 MGP_NODShiLtJ_G0028142.1 mouse_genomes_project 4 65422881 65550967 - MGP_NODShiLtJ_P0065528 Susd1 protein_coding protein_coding MGP_NODShiLtJ_T0065529.1 MGP_NODShiLtJ_G0028142.1 mouse_genomes_project 4 65422952 65550967 - MGP_NODShiLtJ_P0065529 Susd1 protein_coding protein_coding MGP_NODShiLtJ_T0065530.1 MGP_NODShiLtJ_G0028142.1 mouse_genomes_project 4 65438365 65442127 - Susd1 protein_coding retained_intron MGP_NODShiLtJ_T0065531.1 MGP_NODShiLtJ_G0028142.1 mouse_genomes_project 4 65441061 65466881 - Susd1 protein_coding retained_intron MGP_NODShiLtJ_T0065035.1 MGP_NODShiLtJ_G0028019.1 mouse_genomes_project 4 47837339 47847035 + MGP_NODShiLtJ_P0065035 Rgp1 protein_coding protein_coding MGP_NODShiLtJ_T0065036.1 MGP_NODShiLtJ_G0028019.1 mouse_genomes_project 4 47837359 47847033 + MGP_NODShiLtJ_P0065036 Rgp1 protein_coding protein_coding MGP_NODShiLtJ_T0065037.1 MGP_NODShiLtJ_G0028019.1 mouse_genomes_project 4 47837578 47839545 + Rgp1 protein_coding processed_transcript MGP_NODShiLtJ_T0065038.1 MGP_NODShiLtJ_G0028019.1 mouse_genomes_project 4 47837582 47841752 + MGP_NODShiLtJ_P0065038 Rgp1 protein_coding protein_coding MGP_NODShiLtJ_T0065039.1 MGP_NODShiLtJ_G0028019.1 mouse_genomes_project 4 47837607 47838248 + Rgp1 protein_coding retained_intron MGP_NODShiLtJ_T0065040.1 MGP_NODShiLtJ_G0028019.1 mouse_genomes_project 4 47838362 47839541 + Rgp1 protein_coding retained_intron MGP_NODShiLtJ_T0065041.1 MGP_NODShiLtJ_G0028019.1 mouse_genomes_project 4 47839835 47840342 + Rgp1 protein_coding retained_intron MGP_NODShiLtJ_T0068728.1 MGP_NODShiLtJ_G0028869.1 mouse_genomes_project 4 158427409 158543627 - MGP_NODShiLtJ_P0068728 protein_coding protein_coding MGP_NODShiLtJ_T0068729.1 MGP_NODShiLtJ_G0028869.1 mouse_genomes_project 4 158437169 158443055 - protein_coding processed_transcript MGP_NODShiLtJ_T0068730.1 MGP_NODShiLtJ_G0028869.1 mouse_genomes_project 4 158443176 158484358 - MGP_NODShiLtJ_P0068730 protein_coding protein_coding MGP_NODShiLtJ_T0068731.1 MGP_NODShiLtJ_G0028869.1 mouse_genomes_project 4 158464129 158572984 - MGP_NODShiLtJ_P0068731 protein_coding protein_coding MGP_NODShiLtJ_T0068732.1 MGP_NODShiLtJ_G0028869.1 mouse_genomes_project 4 158464136 158543529 - MGP_NODShiLtJ_P0068732 protein_coding protein_coding MGP_NODShiLtJ_T0068733.1 MGP_NODShiLtJ_G0028869.1 mouse_genomes_project 4 158464137 158471267 - protein_coding retained_intron MGP_NODShiLtJ_T0068734.1 MGP_NODShiLtJ_G0028869.1 mouse_genomes_project 4 158466435 158543627 - MGP_NODShiLtJ_P0068734 protein_coding protein_coding MGP_NODShiLtJ_T0068735.1 MGP_NODShiLtJ_G0028869.1 mouse_genomes_project 4 158471571 158479968 - protein_coding retained_intron MGP_NODShiLtJ_T0099307.1 MGP_NODShiLtJ_G0037701.1 mouse_genomes_project 4 144537635 144537775 + Gm24621 snRNA snRNA MGP_NODShiLtJ_T0067370.1 MGP_NODShiLtJ_G0028566.1 mouse_genomes_project 4 139755442 139768813 - MGP_NODShiLtJ_P0067370 Dnali1 protein_coding protein_coding MGP_NODShiLtJ_T0068769.1 MGP_NODShiLtJ_G0028888.1 mouse_genomes_project 4 160571390 160582300 - MGP_NODShiLtJ_P0068769 protein_coding protein_coding MGP_NODShiLtJ_T0068771.1 MGP_NODShiLtJ_G0028888.1 mouse_genomes_project 4 160571391 160582308 - MGP_NODShiLtJ_P0068771 protein_coding protein_coding MGP_NODShiLtJ_T0007807.1 MGP_NODShiLtJ_G0006378.1 mouse_genomes_project 4 79919534 79953731 + lincRNA lincRNA MGP_NODShiLtJ_T0014293.1 MGP_NODShiLtJ_G0012401.1 mouse_genomes_project 4 12346325 12346766 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064463.1 MGP_NODShiLtJ_G0027893.1 mouse_genomes_project 4 18404077 18722216 + MGP_NODShiLtJ_P0064463 Cngb3 protein_coding protein_coding MGP_NODShiLtJ_T0067476.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141596895 141638344 + MGP_NODShiLtJ_P0067476 AU040320 protein_coding protein_coding MGP_NODShiLtJ_T0067477.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141596904 141638455 + MGP_NODShiLtJ_P0067477 AU040320 protein_coding protein_coding MGP_NODShiLtJ_T0067478.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141596906 141717893 + MGP_NODShiLtJ_P0067478 AU040320 protein_coding protein_coding MGP_NODShiLtJ_T0067479.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141597121 141701521 + MGP_NODShiLtJ_P0067479 AU040320 protein_coding protein_coding MGP_NODShiLtJ_T0067480.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141597121 141717893 + MGP_NODShiLtJ_P0067480 AU040320 protein_coding protein_coding MGP_NODShiLtJ_T0067481.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141597145 141638358 + MGP_NODShiLtJ_P0067481 AU040320 protein_coding protein_coding MGP_NODShiLtJ_T0067482.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141597165 141634796 + AU040320 protein_coding processed_transcript MGP_NODShiLtJ_T0067483.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141597177 141598085 + AU040320 protein_coding processed_transcript MGP_NODShiLtJ_T0067484.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141661654 141678449 + AU040320 protein_coding processed_transcript MGP_NODShiLtJ_T0067485.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141681621 141686888 + AU040320 protein_coding processed_transcript MGP_NODShiLtJ_T0067486.1 MGP_NODShiLtJ_G0028592.1 mouse_genomes_project 4 141697704 141700736 + AU040320 protein_coding processed_transcript MGP_NODShiLtJ_T0069148.1 MGP_NODShiLtJ_G0028975.1 mouse_genomes_project 4 169636063 169665123 + MGP_NODShiLtJ_P0069148 Plekhg5 protein_coding protein_coding MGP_NODShiLtJ_T0069149.1 MGP_NODShiLtJ_G0028975.1 mouse_genomes_project 4 169647006 169665684 + MGP_NODShiLtJ_P0069149 Plekhg5 protein_coding protein_coding MGP_NODShiLtJ_T0069150.1 MGP_NODShiLtJ_G0028975.1 mouse_genomes_project 4 169647006 169665674 + MGP_NODShiLtJ_P0069150 Plekhg5 protein_coding protein_coding MGP_NODShiLtJ_T0069151.1 MGP_NODShiLtJ_G0028975.1 mouse_genomes_project 4 169654783 169656477 + Plekhg5 protein_coding retained_intron MGP_NODShiLtJ_T0069152.1 MGP_NODShiLtJ_G0028975.1 mouse_genomes_project 4 169657919 169665678 + Plekhg5 protein_coding retained_intron MGP_NODShiLtJ_T0069153.1 MGP_NODShiLtJ_G0028975.1 mouse_genomes_project 4 169658012 169658493 + Plekhg5 protein_coding retained_intron MGP_NODShiLtJ_T0068250.1 MGP_NODShiLtJ_G0028752.1 mouse_genomes_project 4 151326305 151350242 + MGP_NODShiLtJ_P0068250 Il22ra1 protein_coding protein_coding MGP_NODShiLtJ_T0064343.1 MGP_NODShiLtJ_G0027861.1 mouse_genomes_project 4 8500044 8525529 - MGP_NODShiLtJ_P0064343 Ndufaf6 protein_coding protein_coding MGP_NODShiLtJ_T0064344.1 MGP_NODShiLtJ_G0027861.1 mouse_genomes_project 4 8500049 8508021 - Ndufaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0064345.1 MGP_NODShiLtJ_G0027861.1 mouse_genomes_project 4 8500212 8525474 - Ndufaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0064346.1 MGP_NODShiLtJ_G0027861.1 mouse_genomes_project 4 8508010 8525474 - Ndufaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0064347.1 MGP_NODShiLtJ_G0027861.1 mouse_genomes_project 4 8510990 8525508 - Ndufaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0064348.1 MGP_NODShiLtJ_G0027861.1 mouse_genomes_project 4 8519560 8525530 - Ndufaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0064349.1 MGP_NODShiLtJ_G0027861.1 mouse_genomes_project 4 8522316 8525513 - Ndufaf6 protein_coding processed_transcript MGP_NODShiLtJ_T0007761.1 MGP_NODShiLtJ_G0006339.1 mouse_genomes_project 4 39992318 40034665 + Gm12371 lincRNA lincRNA MGP_NODShiLtJ_T0014598.1 MGP_NODShiLtJ_G0012706.1 mouse_genomes_project 4 129379561 129380640 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066646.1 MGP_NODShiLtJ_G0028390.1 mouse_genomes_project 4 126146629 126167370 + MGP_NODShiLtJ_P0066646 Skint1 protein_coding protein_coding MGP_NODShiLtJ_T0066647.1 MGP_NODShiLtJ_G0028390.1 mouse_genomes_project 4 126146629 126171224 + MGP_NODShiLtJ_P0066647 Skint1 protein_coding protein_coding MGP_NODShiLtJ_T0066648.1 MGP_NODShiLtJ_G0028390.1 mouse_genomes_project 4 126146629 126167370 + MGP_NODShiLtJ_P0066648 Skint1 protein_coding protein_coding MGP_NODShiLtJ_T0066649.1 MGP_NODShiLtJ_G0028390.1 mouse_genomes_project 4 126146629 126160765 + MGP_NODShiLtJ_P0066649 Skint1 protein_coding protein_coding MGP_NODShiLtJ_T0066650.1 MGP_NODShiLtJ_G0028390.1 mouse_genomes_project 4 126146642 126153992 + Skint1 protein_coding retained_intron MGP_NODShiLtJ_T0014325.1 MGP_NODShiLtJ_G0012433.1 mouse_genomes_project 4 21895407 21895913 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000001.1 MGP_NODShiLtJ_G0000001.1 mouse_genomes_project 4 131704544 131740212 - Gm17114 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_NODShiLtJ_T0066281.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120083082 120099810 - MGP_NODShiLtJ_P0066281 Ttc4 protein_coding protein_coding MGP_NODShiLtJ_T0066282.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120083086 120099552 - Ttc4 protein_coding processed_transcript MGP_NODShiLtJ_T0066283.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120083259 120088400 - Ttc4 protein_coding processed_transcript MGP_NODShiLtJ_T0066284.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120083890 120099732 - MGP_NODShiLtJ_P0066284 Ttc4 protein_coding protein_coding MGP_NODShiLtJ_T0066285.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120088496 120092560 - Ttc4 protein_coding processed_transcript MGP_NODShiLtJ_T0066286.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120088999 120091908 - Ttc4 protein_coding processed_transcript MGP_NODShiLtJ_T0066287.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120091339 120099757 - MGP_NODShiLtJ_P0066287 Ttc4 protein_coding protein_coding MGP_NODShiLtJ_T0066288.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120092614 120099767 - Ttc4 protein_coding processed_transcript MGP_NODShiLtJ_T0066289.1 MGP_NODShiLtJ_G0028331.1 mouse_genomes_project 4 120097155 120099755 - Ttc4 protein_coding processed_transcript MGP_NODShiLtJ_T0014559.1 MGP_NODShiLtJ_G0012667.1 mouse_genomes_project 4 114433030 114484477 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014644.1 MGP_NODShiLtJ_G0012752.1 mouse_genomes_project 4 141337758 141338177 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068358.1 MGP_NODShiLtJ_G0028777.1 mouse_genomes_project 4 152579767 152586959 - MGP_NODShiLtJ_P0068358 C1qb protein_coding protein_coding MGP_NODShiLtJ_T0068891.1 MGP_NODShiLtJ_G0028930.1 mouse_genomes_project 4 165717542 165742550 + MGP_NODShiLtJ_P0068891 Exosc10 protein_coding protein_coding MGP_NODShiLtJ_T0068892.1 MGP_NODShiLtJ_G0028930.1 mouse_genomes_project 4 165717544 165742539 + Exosc10 protein_coding processed_transcript MGP_NODShiLtJ_T0068893.1 MGP_NODShiLtJ_G0028930.1 mouse_genomes_project 4 165717568 165742542 + MGP_NODShiLtJ_P0068893 Exosc10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068894.1 MGP_NODShiLtJ_G0028930.1 mouse_genomes_project 4 165717575 165742550 + MGP_NODShiLtJ_P0068894 Exosc10 protein_coding protein_coding MGP_NODShiLtJ_T0068895.1 MGP_NODShiLtJ_G0028930.1 mouse_genomes_project 4 165722015 165723106 + MGP_NODShiLtJ_P0068895 Exosc10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068896.1 MGP_NODShiLtJ_G0028930.1 mouse_genomes_project 4 165725290 165736710 + Exosc10 protein_coding retained_intron MGP_NODShiLtJ_T0068897.1 MGP_NODShiLtJ_G0028930.1 mouse_genomes_project 4 165728491 165736600 + Exosc10 protein_coding retained_intron MGP_NODShiLtJ_T0068898.1 MGP_NODShiLtJ_G0028930.1 mouse_genomes_project 4 165736263 165742470 + Exosc10 protein_coding processed_transcript MGP_NODShiLtJ_T0066123.1 MGP_NODShiLtJ_G0028292.1 mouse_genomes_project 4 112776483 112778846 + MGP_NODShiLtJ_P0066123 Efcab7 protein_coding protein_coding MGP_NODShiLtJ_T0066124.1 MGP_NODShiLtJ_G0028292.1 mouse_genomes_project 4 112776722 112825616 + MGP_NODShiLtJ_P0066124 Efcab7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0066125.1 MGP_NODShiLtJ_G0028292.1 mouse_genomes_project 4 112776725 112778846 + MGP_NODShiLtJ_P0066125 Efcab7 protein_coding protein_coding MGP_NODShiLtJ_T0066126.1 MGP_NODShiLtJ_G0028292.1 mouse_genomes_project 4 112776785 112778846 + MGP_NODShiLtJ_P0066126 Efcab7 protein_coding protein_coding MGP_NODShiLtJ_T0066127.1 MGP_NODShiLtJ_G0028292.1 mouse_genomes_project 4 112778659 112825616 + MGP_NODShiLtJ_P0066127 Efcab7 protein_coding protein_coding MGP_NODShiLtJ_T0066128.1 MGP_NODShiLtJ_G0028292.1 mouse_genomes_project 4 112822621 112825794 + MGP_NODShiLtJ_P0066128 Efcab7 protein_coding protein_coding MGP_NODShiLtJ_T0068711.1 MGP_NODShiLtJ_G0028865.1 mouse_genomes_project 4 158105340 158140885 - MGP_NODShiLtJ_P0068711 Ctrc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068713.1 MGP_NODShiLtJ_G0028865.1 mouse_genomes_project 4 158128871 158140979 - Ctrc protein_coding processed_transcript MGP_NODShiLtJ_T0068714.1 MGP_NODShiLtJ_G0028865.1 mouse_genomes_project 4 158128871 158140905 - MGP_NODShiLtJ_P0068714 Ctrc protein_coding protein_coding MGP_NODShiLtJ_T0068715.1 MGP_NODShiLtJ_G0028865.1 mouse_genomes_project 4 158128876 158140981 - MGP_NODShiLtJ_P0068715 Ctrc protein_coding protein_coding MGP_NODShiLtJ_T0068716.1 MGP_NODShiLtJ_G0028865.1 mouse_genomes_project 4 158139480 158139874 - Ctrc protein_coding processed_transcript MGP_NODShiLtJ_T0064272.1 MGP_NODShiLtJ_G0027849.1 mouse_genomes_project 4 3212595 3225113 - MGP_NODShiLtJ_P0064272 Cyp7a1 protein_coding protein_coding MGP_NODShiLtJ_T0064273.1 MGP_NODShiLtJ_G0027849.1 mouse_genomes_project 4 3221390 3225115 - Cyp7a1 protein_coding processed_transcript MGP_NODShiLtJ_T0065385.1 MGP_NODShiLtJ_G0028104.1 mouse_genomes_project 4 58600550 58613256 + MGP_NODShiLtJ_P0065385 Nipsnap3b protein_coding protein_coding MGP_NODShiLtJ_T0065386.1 MGP_NODShiLtJ_G0028104.1 mouse_genomes_project 4 58600620 58610247 + MGP_NODShiLtJ_P0065386 Nipsnap3b protein_coding protein_coding MGP_NODShiLtJ_T0065387.1 MGP_NODShiLtJ_G0028104.1 mouse_genomes_project 4 58609646 58610176 + Nipsnap3b protein_coding processed_transcript MGP_NODShiLtJ_T0065512.1 MGP_NODShiLtJ_G0028135.1 mouse_genomes_project 4 65008328 65023877 + MGP_NODShiLtJ_P0065512 Zkscan16 protein_coding protein_coding MGP_NODShiLtJ_T0064741.1 MGP_NODShiLtJ_G0027961.1 mouse_genomes_project 4 44761284 44790366 - MGP_NODShiLtJ_P0064741 Smu1 protein_coding protein_coding MGP_NODShiLtJ_T0064742.1 MGP_NODShiLtJ_G0027961.1 mouse_genomes_project 4 44773057 44790326 - Smu1 protein_coding processed_transcript MGP_NODShiLtJ_T0064743.1 MGP_NODShiLtJ_G0027961.1 mouse_genomes_project 4 44784875 44790274 - Smu1 protein_coding processed_transcript MGP_NODShiLtJ_T0064744.1 MGP_NODShiLtJ_G0027961.1 mouse_genomes_project 4 44787136 44789841 - Smu1 protein_coding processed_transcript MGP_NODShiLtJ_T0099313.1 MGP_NODShiLtJ_G0037707.1 mouse_genomes_project 4 149153290 149153433 - Gm25270 snRNA snRNA MGP_NODShiLtJ_T0007776.1 MGP_NODShiLtJ_G0006353.1 mouse_genomes_project 4 57388001 57484444 - C630028M04Rik lincRNA lincRNA MGP_NODShiLtJ_T0066505.1 MGP_NODShiLtJ_G0028366.1 mouse_genomes_project 4 122234454 122389292 - MGP_NODShiLtJ_P0066505 protein_coding protein_coding MGP_NODShiLtJ_T0066506.1 MGP_NODShiLtJ_G0028366.1 mouse_genomes_project 4 122234454 122389577 - MGP_NODShiLtJ_P0066506 protein_coding protein_coding MGP_NODShiLtJ_T0066507.1 MGP_NODShiLtJ_G0028366.1 mouse_genomes_project 4 122236244 122324441 - MGP_NODShiLtJ_P0066507 protein_coding protein_coding MGP_NODShiLtJ_T0100519.1 MGP_NODShiLtJ_G0038913.1 mouse_genomes_project 4 20842134 20842219 + Gm25977 snoRNA snoRNA MGP_NODShiLtJ_T0067621.1 MGP_NODShiLtJ_G0028622.1 mouse_genomes_project 4 144347000 144368598 + MGP_NODShiLtJ_P0067621 Sync protein_coding protein_coding MGP_NODShiLtJ_T0067622.1 MGP_NODShiLtJ_G0028622.1 mouse_genomes_project 4 144347014 144367401 + Sync protein_coding retained_intron MGP_NODShiLtJ_T0065425.1 MGP_NODShiLtJ_G0028117.1 mouse_genomes_project 4 62639721 62695243 - MGP_NODShiLtJ_P0065425 Ikbkap protein_coding protein_coding MGP_NODShiLtJ_T0065426.1 MGP_NODShiLtJ_G0028117.1 mouse_genomes_project 4 62641053 62648300 - Ikbkap protein_coding retained_intron MGP_NODShiLtJ_T0065427.1 MGP_NODShiLtJ_G0028117.1 mouse_genomes_project 4 62641056 62654345 - Ikbkap protein_coding retained_intron MGP_NODShiLtJ_T0065428.1 MGP_NODShiLtJ_G0028117.1 mouse_genomes_project 4 62645882 62649406 - Ikbkap protein_coding retained_intron MGP_NODShiLtJ_T0065429.1 MGP_NODShiLtJ_G0028117.1 mouse_genomes_project 4 62658871 62663933 - Ikbkap protein_coding retained_intron MGP_NODShiLtJ_T0065430.1 MGP_NODShiLtJ_G0028117.1 mouse_genomes_project 4 62667777 62671051 - Ikbkap protein_coding retained_intron MGP_NODShiLtJ_T0007862.1 MGP_NODShiLtJ_G0006420.1 mouse_genomes_project 4 122228185 122234431 - lincRNA lincRNA MGP_NODShiLtJ_T0004370.1 MGP_NODShiLtJ_G0003806.1 mouse_genomes_project 4 12981833 12992275 + Gm11844 antisense antisense MGP_NODShiLtJ_T0007766.1 MGP_NODShiLtJ_G0006344.1 mouse_genomes_project 4 47270740 47280035 + Gm26881 lincRNA lincRNA MGP_NODShiLtJ_T0017886.1 MGP_NODShiLtJ_G0015404.1 mouse_genomes_project 4 25137931 25143754 - C230012O17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017887.1 MGP_NODShiLtJ_G0015404.1 mouse_genomes_project 4 25139467 25144221 - C230012O17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017888.1 MGP_NODShiLtJ_G0015404.1 mouse_genomes_project 4 25143509 25144587 - C230012O17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0007956.1 MGP_NODShiLtJ_G0006488.1 mouse_genomes_project 4 167093490 167102185 + Gm16188 lincRNA lincRNA MGP_NODShiLtJ_T0014319.1 MGP_NODShiLtJ_G0012427.1 mouse_genomes_project 4 19723935 19725239 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014503.1 MGP_NODShiLtJ_G0012611.1 mouse_genomes_project 4 92193498 92194267 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014612.1 MGP_NODShiLtJ_G0012720.1 mouse_genomes_project 4 132407713 132408140 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064849.1 MGP_NODShiLtJ_G0027989.1 mouse_genomes_project 4 46275520 46276185 + MGP_NODShiLtJ_P0064849 protein_coding protein_coding MGP_NODShiLtJ_T0064660.1 MGP_NODShiLtJ_G0027942.1 mouse_genomes_project 4 37162154 37187734 - MGP_NODShiLtJ_P0064660 Slc35a1 protein_coding protein_coding MGP_NODShiLtJ_T0064661.1 MGP_NODShiLtJ_G0027942.1 mouse_genomes_project 4 37162776 37183766 - Slc35a1 protein_coding processed_transcript MGP_NODShiLtJ_T0064662.1 MGP_NODShiLtJ_G0027942.1 mouse_genomes_project 4 37168373 37183673 - MGP_NODShiLtJ_P0064662 Slc35a1 protein_coding protein_coding MGP_NODShiLtJ_T0064663.1 MGP_NODShiLtJ_G0027942.1 mouse_genomes_project 4 37173860 37187551 - Slc35a1 protein_coding processed_transcript MGP_NODShiLtJ_T0064664.1 MGP_NODShiLtJ_G0027942.1 mouse_genomes_project 4 37183644 37187692 - Slc35a1 protein_coding processed_transcript MGP_NODShiLtJ_T0068248.1 MGP_NODShiLtJ_G0028750.1 mouse_genomes_project 4 151126802 151159407 - MGP_NODShiLtJ_P0068248 Grhl3 protein_coding protein_coding MGP_NODShiLtJ_T0068987.1 MGP_NODShiLtJ_G0028943.1 mouse_genomes_project 4 166733249 166739028 - MGP_NODShiLtJ_P0068987 Rbp7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068988.1 MGP_NODShiLtJ_G0028943.1 mouse_genomes_project 4 166733249 166740582 - MGP_NODShiLtJ_P0068988 Rbp7 protein_coding protein_coding MGP_NODShiLtJ_T0068989.1 MGP_NODShiLtJ_G0028943.1 mouse_genomes_project 4 166733265 166740574 - Rbp7 protein_coding processed_transcript MGP_NODShiLtJ_T0014546.1 MGP_NODShiLtJ_G0012654.1 mouse_genomes_project 4 111146408 111146722 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007928.1 MGP_NODShiLtJ_G0006464.1 mouse_genomes_project 4 150674171 150676398 - Gm16225 lincRNA lincRNA MGP_NODShiLtJ_T0010514.1 MGP_NODShiLtJ_G0008647.1 mouse_genomes_project 4 134916107 134916199 + Mir30f miRNA miRNA MGP_NODShiLtJ_T0067897.1 MGP_NODShiLtJ_G0028673.1 mouse_genomes_project 4 147492498 147506357 - MGP_NODShiLtJ_P0067897 Rcc1 protein_coding protein_coding MGP_NODShiLtJ_T0067898.1 MGP_NODShiLtJ_G0028673.1 mouse_genomes_project 4 147492502 147506315 - MGP_NODShiLtJ_P0067898 Rcc1 protein_coding protein_coding MGP_NODShiLtJ_T0067899.1 MGP_NODShiLtJ_G0028673.1 mouse_genomes_project 4 147492502 147512230 - MGP_NODShiLtJ_P0067899 Rcc1 protein_coding protein_coding MGP_NODShiLtJ_T0067900.1 MGP_NODShiLtJ_G0028673.1 mouse_genomes_project 4 147498265 147500542 - Rcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067901.1 MGP_NODShiLtJ_G0028673.1 mouse_genomes_project 4 147498432 147514199 - MGP_NODShiLtJ_P0067901 Rcc1 protein_coding protein_coding MGP_NODShiLtJ_T0067902.1 MGP_NODShiLtJ_G0028673.1 mouse_genomes_project 4 147499324 147506311 - Rcc1 protein_coding retained_intron MGP_NODShiLtJ_T0067903.1 MGP_NODShiLtJ_G0028673.1 mouse_genomes_project 4 147499570 147505967 - Rcc1 protein_coding retained_intron MGP_NODShiLtJ_T0067904.1 MGP_NODShiLtJ_G0028673.1 mouse_genomes_project 4 147500100 147506302 - Rcc1 protein_coding retained_intron MGP_NODShiLtJ_T0014308.1 MGP_NODShiLtJ_G0012416.1 mouse_genomes_project 4 14861219 14861878 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068296.1 MGP_NODShiLtJ_G0028762.1 mouse_genomes_project 4 151626531 151647644 - MGP_NODShiLtJ_P0068296 Tceb3 protein_coding protein_coding MGP_NODShiLtJ_T0064984.1 MGP_NODShiLtJ_G0028012.1 mouse_genomes_project 4 47746086 47747392 + Ccdc107 protein_coding processed_transcript MGP_NODShiLtJ_T0064985.1 MGP_NODShiLtJ_G0028012.1 mouse_genomes_project 4 47746548 47749108 + MGP_NODShiLtJ_P0064985 Ccdc107 protein_coding protein_coding MGP_NODShiLtJ_T0064986.1 MGP_NODShiLtJ_G0028012.1 mouse_genomes_project 4 47746563 47746997 + Ccdc107 protein_coding processed_transcript MGP_NODShiLtJ_T0064987.1 MGP_NODShiLtJ_G0028012.1 mouse_genomes_project 4 47746575 47749108 + MGP_NODShiLtJ_P0064987 Ccdc107 protein_coding protein_coding MGP_NODShiLtJ_T0064988.1 MGP_NODShiLtJ_G0028012.1 mouse_genomes_project 4 47746603 47749051 + Ccdc107 protein_coding processed_transcript MGP_NODShiLtJ_T0064989.1 MGP_NODShiLtJ_G0028012.1 mouse_genomes_project 4 47746603 47749058 + Ccdc107 protein_coding processed_transcript MGP_NODShiLtJ_T0067097.1 MGP_NODShiLtJ_G0028497.1 mouse_genomes_project 4 133203767 133237474 - AU022252 protein_coding processed_transcript MGP_NODShiLtJ_T0067099.1 MGP_NODShiLtJ_G0028497.1 mouse_genomes_project 4 133220054 133237478 - MGP_NODShiLtJ_P0067099 AU022252 protein_coding protein_coding MGP_NODShiLtJ_T0067100.1 MGP_NODShiLtJ_G0028497.1 mouse_genomes_project 4 133229176 133237444 - AU022252 protein_coding processed_transcript MGP_NODShiLtJ_T0067101.1 MGP_NODShiLtJ_G0028497.1 mouse_genomes_project 4 133229266 133237451 - AU022252 protein_coding processed_transcript MGP_NODShiLtJ_T0065745.1 MGP_NODShiLtJ_G0028204.1 mouse_genomes_project 4 91214093 91217604 + MGP_NODShiLtJ_P0065745 Tyrp1 protein_coding protein_coding MGP_NODShiLtJ_T0065746.1 MGP_NODShiLtJ_G0028204.1 mouse_genomes_project 4 91214200 91231624 + MGP_NODShiLtJ_P0065746 Tyrp1 protein_coding protein_coding MGP_NODShiLtJ_T0065747.1 MGP_NODShiLtJ_G0028204.1 mouse_genomes_project 4 91214277 91231625 + MGP_NODShiLtJ_P0065747 Tyrp1 protein_coding protein_coding MGP_NODShiLtJ_T0065748.1 MGP_NODShiLtJ_G0028204.1 mouse_genomes_project 4 91226492 91230906 + MGP_NODShiLtJ_P0065748 Tyrp1 protein_coding protein_coding MGP_NODShiLtJ_T0100539.1 MGP_NODShiLtJ_G0038933.1 mouse_genomes_project 4 59657457 59657588 + Gm24177 snoRNA snoRNA MGP_NODShiLtJ_T0014401.1 MGP_NODShiLtJ_G0012509.1 mouse_genomes_project 4 49536526 49536885 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014374.1 MGP_NODShiLtJ_G0012482.1 mouse_genomes_project 4 38024334 38024768 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100580.1 MGP_NODShiLtJ_G0038974.1 mouse_genomes_project 4 141663407 141663537 - Gm24161 snoRNA snoRNA MGP_NODShiLtJ_T0010481.1 MGP_NODShiLtJ_G0008614.1 mouse_genomes_project 4 39612686 39612763 + Mir873b miRNA miRNA MGP_NODShiLtJ_T0067195.1 MGP_NODShiLtJ_G0028518.1 mouse_genomes_project 4 134804212 134805461 + MGP_NODShiLtJ_P0067195 Cited4 protein_coding protein_coding MGP_NODShiLtJ_T0068352.1 MGP_NODShiLtJ_G0028776.1 mouse_genomes_project 4 152330010 152532584 - MGP_NODShiLtJ_P0068352 Ephb2 protein_coding protein_coding MGP_NODShiLtJ_T0068353.1 MGP_NODShiLtJ_G0028776.1 mouse_genomes_project 4 152336773 152532552 - MGP_NODShiLtJ_P0068353 Ephb2 protein_coding protein_coding MGP_NODShiLtJ_T0068354.1 MGP_NODShiLtJ_G0028776.1 mouse_genomes_project 4 152337802 152532439 - MGP_NODShiLtJ_P0068354 Ephb2 protein_coding protein_coding MGP_NODShiLtJ_T0068355.1 MGP_NODShiLtJ_G0028776.1 mouse_genomes_project 4 152342879 152345036 - Ephb2 protein_coding retained_intron MGP_NODShiLtJ_T0068356.1 MGP_NODShiLtJ_G0028776.1 mouse_genomes_project 4 152344846 152378239 - MGP_NODShiLtJ_P0068356 Ephb2 protein_coding protein_coding MGP_NODShiLtJ_T0068357.1 MGP_NODShiLtJ_G0028776.1 mouse_genomes_project 4 152466193 152532570 - Ephb2 protein_coding retained_intron MGP_NODShiLtJ_T0069481.1 MGP_NODShiLtJ_G0029032.1 mouse_genomes_project 4 173672124 173672895 + Mrpl20 protein_coding processed_transcript MGP_NODShiLtJ_T0069482.1 MGP_NODShiLtJ_G0029032.1 mouse_genomes_project 4 173672773 173678324 + MGP_NODShiLtJ_P0069482 Mrpl20 protein_coding protein_coding MGP_NODShiLtJ_T0069483.1 MGP_NODShiLtJ_G0029032.1 mouse_genomes_project 4 173672899 173678291 + MGP_NODShiLtJ_P0069483 Mrpl20 protein_coding protein_coding MGP_NODShiLtJ_T0069484.1 MGP_NODShiLtJ_G0029032.1 mouse_genomes_project 4 173672902 173679468 + MGP_NODShiLtJ_P0069484 Mrpl20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069485.1 MGP_NODShiLtJ_G0029032.1 mouse_genomes_project 4 173672904 173676651 + MGP_NODShiLtJ_P0069485 Mrpl20 protein_coding protein_coding MGP_NODShiLtJ_T0069486.1 MGP_NODShiLtJ_G0029032.1 mouse_genomes_project 4 173673011 173678287 + Mrpl20 protein_coding processed_transcript MGP_NODShiLtJ_T0066077.1 MGP_NODShiLtJ_G0028282.1 mouse_genomes_project 4 111574361 111643155 - MGP_NODShiLtJ_P0066077 Kank4 protein_coding protein_coding MGP_NODShiLtJ_T0066078.1 MGP_NODShiLtJ_G0028282.1 mouse_genomes_project 4 111575768 111593249 - Kank4 protein_coding processed_transcript MGP_NODShiLtJ_T0007960.1 MGP_NODShiLtJ_G0006492.1 mouse_genomes_project 4 168068932 168087088 - lincRNA lincRNA MGP_NODShiLtJ_T0098036.1 MGP_NODShiLtJ_G0036448.1 mouse_genomes_project 4 92985322 92985427 + n-R5s188 rRNA rRNA MGP_NODShiLtJ_T0007800.1 MGP_NODShiLtJ_G0006371.1 mouse_genomes_project 4 70131319 70139622 - lincRNA lincRNA MGP_NODShiLtJ_T0066788.1 MGP_NODShiLtJ_G0028429.1 mouse_genomes_project 4 129935526 129984716 + MGP_NODShiLtJ_P0066788 Pik3r3 protein_coding protein_coding MGP_NODShiLtJ_T0066789.1 MGP_NODShiLtJ_G0028429.1 mouse_genomes_project 4 129935569 130025163 + MGP_NODShiLtJ_P0066789 Pik3r3 protein_coding protein_coding MGP_NODShiLtJ_T0066790.1 MGP_NODShiLtJ_G0028429.1 mouse_genomes_project 4 129935604 130021948 + MGP_NODShiLtJ_P0066790 Pik3r3 protein_coding protein_coding MGP_NODShiLtJ_T0017900.1 MGP_NODShiLtJ_G0015413.1 mouse_genomes_project 4 51064381 51068285 + Gm16731 processed_transcript processed_transcript MGP_NODShiLtJ_T0014524.1 MGP_NODShiLtJ_G0012632.1 mouse_genomes_project 4 101851389 101852141 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007817.1 MGP_NODShiLtJ_G0006386.1 mouse_genomes_project 4 94800354 94804294 - Gm12414 lincRNA lincRNA MGP_NODShiLtJ_T0066560.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 122943995 123050155 + MGP_NODShiLtJ_P0066560 Eps15 protein_coding protein_coding MGP_NODShiLtJ_T0066561.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 122944030 123048025 + MGP_NODShiLtJ_P0066561 Eps15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066562.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 122944103 122979253 + MGP_NODShiLtJ_P0066562 Eps15 protein_coding protein_coding MGP_NODShiLtJ_T0066563.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 122944139 123047804 + MGP_NODShiLtJ_P0066563 Eps15 protein_coding protein_coding MGP_NODShiLtJ_T0066564.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 122944139 123047804 + MGP_NODShiLtJ_P0066564 Eps15 protein_coding protein_coding MGP_NODShiLtJ_T0066565.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 122970939 122972402 + Eps15 protein_coding retained_intron MGP_NODShiLtJ_T0066566.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 122975497 122979556 + Eps15 protein_coding retained_intron MGP_NODShiLtJ_T0066567.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 123009358 123048904 + MGP_NODShiLtJ_P0066567 Eps15 protein_coding protein_coding MGP_NODShiLtJ_T0066568.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 123009552 123026843 + Eps15 protein_coding retained_intron MGP_NODShiLtJ_T0066569.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 123030492 123048121 + MGP_NODShiLtJ_P0066569 Eps15 protein_coding protein_coding MGP_NODShiLtJ_T0066570.1 MGP_NODShiLtJ_G0028376.1 mouse_genomes_project 4 123030536 123045207 + Eps15 protein_coding processed_transcript MGP_NODShiLtJ_T0004472.1 MGP_NODShiLtJ_G0003884.1 mouse_genomes_project 4 138488945 138509239 - antisense antisense MGP_NODShiLtJ_T0004473.1 MGP_NODShiLtJ_G0003884.1 mouse_genomes_project 4 138489113 138489392 - antisense antisense MGP_NODShiLtJ_T0068740.1 MGP_NODShiLtJ_G0028871.1 mouse_genomes_project 4 159698736 159748732 - MGP_NODShiLtJ_P0068740 Pdpn protein_coding protein_coding MGP_NODShiLtJ_T0068741.1 MGP_NODShiLtJ_G0028871.1 mouse_genomes_project 4 159699650 159748631 - MGP_NODShiLtJ_P0068741 Pdpn protein_coding protein_coding MGP_NODShiLtJ_T0007895.1 MGP_NODShiLtJ_G0006444.1 mouse_genomes_project 4 144079935 144095523 - lincRNA lincRNA MGP_NODShiLtJ_T0010529.1 MGP_NODShiLtJ_G0008662.1 mouse_genomes_project 4 148889557 148889683 - Gm23158 miRNA miRNA MGP_NODShiLtJ_T0068856.1 MGP_NODShiLtJ_G0028922.1 mouse_genomes_project 4 165253123 165264765 + Mad2l2 protein_coding processed_transcript MGP_NODShiLtJ_T0068857.1 MGP_NODShiLtJ_G0028922.1 mouse_genomes_project 4 165264155 165269080 + MGP_NODShiLtJ_P0068857 Mad2l2 protein_coding protein_coding MGP_NODShiLtJ_T0068858.1 MGP_NODShiLtJ_G0028922.1 mouse_genomes_project 4 165264697 165269079 + MGP_NODShiLtJ_P0068858 Mad2l2 protein_coding protein_coding MGP_NODShiLtJ_T0068859.1 MGP_NODShiLtJ_G0028922.1 mouse_genomes_project 4 165264735 165267413 + Mad2l2 protein_coding retained_intron MGP_NODShiLtJ_T0068860.1 MGP_NODShiLtJ_G0028922.1 mouse_genomes_project 4 165264768 165269643 + MGP_NODShiLtJ_P0068860 Mad2l2 protein_coding protein_coding MGP_NODShiLtJ_T0068861.1 MGP_NODShiLtJ_G0028922.1 mouse_genomes_project 4 165268748 165269410 + Mad2l2 protein_coding retained_intron MGP_NODShiLtJ_T0065517.1 MGP_NODShiLtJ_G0028138.1 mouse_genomes_project 4 65072904 65110297 + MGP_NODShiLtJ_P0065517 Gm20503 protein_coding protein_coding MGP_NODShiLtJ_T0069467.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173595490 173618419 - MGP_NODShiLtJ_P0069467 Atad3a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069468.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173595494 173618509 - MGP_NODShiLtJ_P0069468 Atad3a protein_coding protein_coding MGP_NODShiLtJ_T0069469.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173595687 173601199 - Atad3a protein_coding retained_intron MGP_NODShiLtJ_T0069470.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173600920 173606087 - Atad3a protein_coding retained_intron MGP_NODShiLtJ_T0069471.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173602055 173605955 - Atad3a protein_coding retained_intron MGP_NODShiLtJ_T0069472.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173606979 173613492 - MGP_NODShiLtJ_P0069472 Atad3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069473.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173607281 173612183 - MGP_NODShiLtJ_P0069473 Atad3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069474.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173608261 173618344 - MGP_NODShiLtJ_P0069474 Atad3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069475.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173611031 173618484 - MGP_NODShiLtJ_P0069475 Atad3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069476.1 MGP_NODShiLtJ_G0029028.1 mouse_genomes_project 4 173613253 173618503 - Atad3a protein_coding retained_intron MGP_NODShiLtJ_T0066810.1 MGP_NODShiLtJ_G0028433.1 mouse_genomes_project 4 130294250 130340542 + MGP_NODShiLtJ_P0066810 Gpbp1l1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0066811.1 MGP_NODShiLtJ_G0028433.1 mouse_genomes_project 4 130294417 130340537 + MGP_NODShiLtJ_P0066811 Gpbp1l1 protein_coding protein_coding MGP_NODShiLtJ_T0066812.1 MGP_NODShiLtJ_G0028433.1 mouse_genomes_project 4 130294838 130339714 + MGP_NODShiLtJ_P0066812 Gpbp1l1 protein_coding protein_coding MGP_NODShiLtJ_T0066813.1 MGP_NODShiLtJ_G0028433.1 mouse_genomes_project 4 130320918 130323569 + Gpbp1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0066814.1 MGP_NODShiLtJ_G0028433.1 mouse_genomes_project 4 130323479 130332539 + Gpbp1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0004391.1 MGP_NODShiLtJ_G0003824.1 mouse_genomes_project 4 49351882 49359590 - Gm12679 antisense antisense MGP_NODShiLtJ_T0098160.1 MGP_NODShiLtJ_G0036572.1 mouse_genomes_project 4 57206618 57207051 + Gm24943 ribozyme ribozyme MGP_NODShiLtJ_T0065214.1 MGP_NODShiLtJ_G0028056.1 mouse_genomes_project 4 50356634 50375920 + Ccdc180 protein_coding processed_transcript MGP_NODShiLtJ_T0065215.1 MGP_NODShiLtJ_G0028056.1 mouse_genomes_project 4 50356634 50422506 + MGP_NODShiLtJ_P0065215 Ccdc180 protein_coding protein_coding MGP_NODShiLtJ_T0065216.1 MGP_NODShiLtJ_G0028056.1 mouse_genomes_project 4 50357183 50422499 + MGP_NODShiLtJ_P0065216 Ccdc180 protein_coding protein_coding MGP_NODShiLtJ_T0065217.1 MGP_NODShiLtJ_G0028056.1 mouse_genomes_project 4 50382259 50392627 + MGP_NODShiLtJ_P0065217 Ccdc180 protein_coding protein_coding MGP_NODShiLtJ_T0065161.1 MGP_NODShiLtJ_G0028044.1 mouse_genomes_project 4 49404174 49419281 + MGP_NODShiLtJ_P0065161 Polr1e protein_coding protein_coding MGP_NODShiLtJ_T0065162.1 MGP_NODShiLtJ_G0028044.1 mouse_genomes_project 4 49404253 49417954 + MGP_NODShiLtJ_P0065162 Polr1e protein_coding protein_coding MGP_NODShiLtJ_T0065163.1 MGP_NODShiLtJ_G0028044.1 mouse_genomes_project 4 49404254 49422154 + MGP_NODShiLtJ_P0065163 Polr1e protein_coding protein_coding MGP_NODShiLtJ_T0065164.1 MGP_NODShiLtJ_G0028044.1 mouse_genomes_project 4 49404288 49412460 + Polr1e protein_coding processed_transcript MGP_NODShiLtJ_T0065165.1 MGP_NODShiLtJ_G0028044.1 mouse_genomes_project 4 49404826 49417701 + MGP_NODShiLtJ_P0065165 Polr1e protein_coding protein_coding MGP_NODShiLtJ_T0065166.1 MGP_NODShiLtJ_G0028044.1 mouse_genomes_project 4 49414733 49416974 + Polr1e protein_coding processed_transcript MGP_NODShiLtJ_T0065167.1 MGP_NODShiLtJ_G0028044.1 mouse_genomes_project 4 49416851 49417949 + Polr1e protein_coding processed_transcript MGP_NODShiLtJ_T0065367.1 MGP_NODShiLtJ_G0028097.1 mouse_genomes_project 4 57929455 57993988 + MGP_NODShiLtJ_P0065367 Smc2 protein_coding protein_coding MGP_NODShiLtJ_T0065368.1 MGP_NODShiLtJ_G0028097.1 mouse_genomes_project 4 57929455 57993988 + MGP_NODShiLtJ_P0065368 Smc2 protein_coding protein_coding MGP_NODShiLtJ_T0065369.1 MGP_NODShiLtJ_G0028097.1 mouse_genomes_project 4 57929464 57939753 + Smc2 protein_coding processed_transcript MGP_NODShiLtJ_T0065370.1 MGP_NODShiLtJ_G0028097.1 mouse_genomes_project 4 57929478 57943318 + Smc2 protein_coding processed_transcript MGP_NODShiLtJ_T0065371.1 MGP_NODShiLtJ_G0028097.1 mouse_genomes_project 4 57929481 57950543 + MGP_NODShiLtJ_P0065371 Smc2 protein_coding protein_coding MGP_NODShiLtJ_T0069487.1 MGP_NODShiLtJ_G0029033.1 mouse_genomes_project 4 173681940 173693954 + MGP_NODShiLtJ_P0069487 Ccnl2 protein_coding protein_coding MGP_NODShiLtJ_T0069488.1 MGP_NODShiLtJ_G0029033.1 mouse_genomes_project 4 173681952 173693954 + Ccnl2 protein_coding retained_intron MGP_NODShiLtJ_T0069489.1 MGP_NODShiLtJ_G0029033.1 mouse_genomes_project 4 173681970 173691265 + Ccnl2 protein_coding retained_intron MGP_NODShiLtJ_T0069490.1 MGP_NODShiLtJ_G0029033.1 mouse_genomes_project 4 173682229 173685298 + Ccnl2 protein_coding retained_intron MGP_NODShiLtJ_T0069491.1 MGP_NODShiLtJ_G0029033.1 mouse_genomes_project 4 173682936 173693714 + MGP_NODShiLtJ_P0069491 Ccnl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069492.1 MGP_NODShiLtJ_G0029033.1 mouse_genomes_project 4 173689737 173693962 + MGP_NODShiLtJ_P0069492 Ccnl2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064856.1 MGP_NODShiLtJ_G0027996.1 mouse_genomes_project 4 47062384 47068586 - MGP_NODShiLtJ_P0064856 Fam205c protein_coding protein_coding MGP_NODShiLtJ_T0064857.1 MGP_NODShiLtJ_G0027996.1 mouse_genomes_project 4 47062584 47068578 - MGP_NODShiLtJ_P0064857 Fam205c protein_coding protein_coding MGP_NODShiLtJ_T0064858.1 MGP_NODShiLtJ_G0027996.1 mouse_genomes_project 4 47065882 47068103 - Fam205c protein_coding processed_transcript MGP_NODShiLtJ_T0064859.1 MGP_NODShiLtJ_G0027996.1 mouse_genomes_project 4 47066070 47068617 - Fam205c protein_coding processed_transcript MGP_NODShiLtJ_T0068321.1 MGP_NODShiLtJ_G0028769.1 mouse_genomes_project 4 151948339 152003377 + MGP_NODShiLtJ_P0068321 Hnrnpr protein_coding protein_coding MGP_NODShiLtJ_T0068322.1 MGP_NODShiLtJ_G0028769.1 mouse_genomes_project 4 151948399 151970706 + MGP_NODShiLtJ_P0068322 Hnrnpr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068323.1 MGP_NODShiLtJ_G0028769.1 mouse_genomes_project 4 151948906 151967325 + MGP_NODShiLtJ_P0068323 Hnrnpr protein_coding protein_coding MGP_NODShiLtJ_T0068324.1 MGP_NODShiLtJ_G0028769.1 mouse_genomes_project 4 151948962 151970734 + MGP_NODShiLtJ_P0068324 Hnrnpr protein_coding protein_coding MGP_NODShiLtJ_T0068325.1 MGP_NODShiLtJ_G0028769.1 mouse_genomes_project 4 151949056 151953823 + MGP_NODShiLtJ_P0068325 Hnrnpr protein_coding protein_coding MGP_NODShiLtJ_T0068326.1 MGP_NODShiLtJ_G0028769.1 mouse_genomes_project 4 151978617 151981818 + Hnrnpr protein_coding retained_intron MGP_NODShiLtJ_T0068327.1 MGP_NODShiLtJ_G0028769.1 mouse_genomes_project 4 151981563 151985097 + Hnrnpr protein_coding retained_intron MGP_NODShiLtJ_T0068328.1 MGP_NODShiLtJ_G0028769.1 mouse_genomes_project 4 151999717 152001979 + Hnrnpr protein_coding processed_transcript MGP_NODShiLtJ_T0068072.1 MGP_NODShiLtJ_G0028711.1 mouse_genomes_project 4 149429689 149452514 - MGP_NODShiLtJ_P0068072 Lin28a protein_coding protein_coding MGP_NODShiLtJ_T0068073.1 MGP_NODShiLtJ_G0028711.1 mouse_genomes_project 4 149432619 149442318 - MGP_NODShiLtJ_P0068073 Lin28a protein_coding protein_coding MGP_NODShiLtJ_T0068074.1 MGP_NODShiLtJ_G0028711.1 mouse_genomes_project 4 149436450 149452055 - MGP_NODShiLtJ_P0068074 Lin28a protein_coding protein_coding MGP_NODShiLtJ_T0010532.1 MGP_NODShiLtJ_G0008665.1 mouse_genomes_project 4 150088919 150089048 - Mir6403 miRNA miRNA MGP_NODShiLtJ_T0068036.1 MGP_NODShiLtJ_G0028706.1 mouse_genomes_project 4 149002939 149016069 - MGP_NODShiLtJ_P0068036 Pigv protein_coding protein_coding MGP_NODShiLtJ_T0068037.1 MGP_NODShiLtJ_G0028706.1 mouse_genomes_project 4 149005697 149016069 - MGP_NODShiLtJ_P0068037 Pigv protein_coding protein_coding MGP_NODShiLtJ_T0068038.1 MGP_NODShiLtJ_G0028706.1 mouse_genomes_project 4 149012168 149016069 - Pigv protein_coding processed_transcript MGP_NODShiLtJ_T0010524.1 MGP_NODShiLtJ_G0008657.1 mouse_genomes_project 4 147111979 147112051 - Gm27445 miRNA miRNA MGP_NODShiLtJ_T0101921.1 MGP_NODShiLtJ_G0040089.1 mouse_genomes_project 4 126306933 126326844 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098031.1 MGP_NODShiLtJ_G0036443.1 mouse_genomes_project 4 47963511 47963643 + Gm23257 rRNA rRNA MGP_NODShiLtJ_T0068053.1 MGP_NODShiLtJ_G0028709.1 mouse_genomes_project 4 149389517 149392727 - MGP_NODShiLtJ_P0068053 protein_coding protein_coding MGP_NODShiLtJ_T0068054.1 MGP_NODShiLtJ_G0028709.1 mouse_genomes_project 4 149389614 149391973 - protein_coding retained_intron MGP_NODShiLtJ_T0068055.1 MGP_NODShiLtJ_G0028709.1 mouse_genomes_project 4 149389614 149391352 - protein_coding processed_transcript MGP_NODShiLtJ_T0068056.1 MGP_NODShiLtJ_G0028709.1 mouse_genomes_project 4 149389614 149391328 - protein_coding processed_transcript MGP_NODShiLtJ_T0068057.1 MGP_NODShiLtJ_G0028709.1 mouse_genomes_project 4 149389614 149392727 - protein_coding processed_transcript MGP_NODShiLtJ_T0068058.1 MGP_NODShiLtJ_G0028709.1 mouse_genomes_project 4 149389614 149391958 - MGP_NODShiLtJ_P0068058 protein_coding protein_coding MGP_NODShiLtJ_T0068059.1 MGP_NODShiLtJ_G0028709.1 mouse_genomes_project 4 149389668 149391955 - protein_coding retained_intron MGP_NODShiLtJ_T0068060.1 MGP_NODShiLtJ_G0028709.1 mouse_genomes_project 4 149389678 149391925 - protein_coding retained_intron MGP_NODShiLtJ_T0068373.1 MGP_NODShiLtJ_G0028787.1 mouse_genomes_project 4 153232060 153342283 + MGP_NODShiLtJ_P0068373 Hspg2 protein_coding protein_coding MGP_NODShiLtJ_T0068374.1 MGP_NODShiLtJ_G0028787.1 mouse_genomes_project 4 153232094 153342282 + MGP_NODShiLtJ_P0068374 Hspg2 protein_coding protein_coding MGP_NODShiLtJ_T0068375.1 MGP_NODShiLtJ_G0028787.1 mouse_genomes_project 4 153232120 153342288 + MGP_NODShiLtJ_P0068375 Hspg2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068376.1 MGP_NODShiLtJ_G0028787.1 mouse_genomes_project 4 153340823 153341770 + Hspg2 protein_coding processed_transcript MGP_NODShiLtJ_T0004560.1 MGP_NODShiLtJ_G0003952.1 mouse_genomes_project 4 173618593 173634796 + antisense antisense MGP_NODShiLtJ_T0004561.1 MGP_NODShiLtJ_G0003952.1 mouse_genomes_project 4 173618607 173619672 + antisense antisense MGP_NODShiLtJ_T0004562.1 MGP_NODShiLtJ_G0003952.1 mouse_genomes_project 4 173618625 173627674 + antisense antisense MGP_NODShiLtJ_T0004563.1 MGP_NODShiLtJ_G0003952.1 mouse_genomes_project 4 173618636 173627685 + antisense antisense MGP_NODShiLtJ_T0014269.1 MGP_NODShiLtJ_G0012377.1 mouse_genomes_project 4 3207065 3207940 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067623.1 MGP_NODShiLtJ_G0028623.1 mouse_genomes_project 4 144367130 144397904 - MGP_NODShiLtJ_P0067623 Rbbp4 protein_coding protein_coding MGP_NODShiLtJ_T0067624.1 MGP_NODShiLtJ_G0028623.1 mouse_genomes_project 4 144369564 144397179 - Rbbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0067625.1 MGP_NODShiLtJ_G0028623.1 mouse_genomes_project 4 144387354 144397783 - Rbbp4 protein_coding retained_intron MGP_NODShiLtJ_T0067626.1 MGP_NODShiLtJ_G0028623.1 mouse_genomes_project 4 144391194 144397617 - MGP_NODShiLtJ_P0067626 Rbbp4 protein_coding protein_coding MGP_NODShiLtJ_T0099272.1 MGP_NODShiLtJ_G0037666.1 mouse_genomes_project 4 93905631 93905738 - Gm23412 snRNA snRNA MGP_NODShiLtJ_T0067781.1 MGP_NODShiLtJ_G0028650.1 mouse_genomes_project 4 145346303 145347051 - Gm853 protein_coding processed_transcript MGP_NODShiLtJ_T0067782.1 MGP_NODShiLtJ_G0028650.1 mouse_genomes_project 4 145346303 145359908 - MGP_NODShiLtJ_P0067782 Gm853 protein_coding protein_coding MGP_NODShiLtJ_T0066216.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116283581 116285096 + Mier1 protein_coding processed_transcript MGP_NODShiLtJ_T0066217.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116283586 116337519 + MGP_NODShiLtJ_P0066217 Mier1 protein_coding protein_coding MGP_NODShiLtJ_T0066218.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116283622 116301434 + Mier1 protein_coding processed_transcript MGP_NODShiLtJ_T0066219.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116283656 116314257 + Mier1 protein_coding processed_transcript MGP_NODShiLtJ_T0066220.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116283953 116287499 + MGP_NODShiLtJ_P0066220 Mier1 protein_coding protein_coding MGP_NODShiLtJ_T0066221.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116284147 116287863 + Mier1 protein_coding processed_transcript MGP_NODShiLtJ_T0066222.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116284463 116297710 + MGP_NODShiLtJ_P0066222 Mier1 protein_coding protein_coding MGP_NODShiLtJ_T0066223.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116284751 116337514 + MGP_NODShiLtJ_P0066223 Mier1 protein_coding protein_coding MGP_NODShiLtJ_T0066224.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116284829 116337514 + MGP_NODShiLtJ_P0066224 Mier1 protein_coding protein_coding MGP_NODShiLtJ_T0066225.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116286486 116287787 + Mier1 protein_coding processed_transcript MGP_NODShiLtJ_T0066226.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116289822 116313637 + Mier1 protein_coding retained_intron MGP_NODShiLtJ_T0066227.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116289842 116315487 + Mier1 protein_coding retained_intron MGP_NODShiLtJ_T0066228.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116289933 116337524 + MGP_NODShiLtJ_P0066228 Mier1 protein_coding protein_coding MGP_NODShiLtJ_T0066229.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116314120 116334519 + MGP_NODShiLtJ_P0066229 Mier1 protein_coding protein_coding MGP_NODShiLtJ_T0066230.1 MGP_NODShiLtJ_G0028312.1 mouse_genomes_project 4 116330350 116334588 + Mier1 protein_coding processed_transcript MGP_NODShiLtJ_T0007802.1 MGP_NODShiLtJ_G0006373.1 mouse_genomes_project 4 70631065 70640204 + Gm11216 lincRNA lincRNA MGP_NODShiLtJ_T0014627.1 MGP_NODShiLtJ_G0012735.1 mouse_genomes_project 4 135565789 135566117 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100568.1 MGP_NODShiLtJ_G0038962.1 mouse_genomes_project 4 119513796 119513911 - Gm26047 snoRNA snoRNA MGP_NODShiLtJ_T0099271.1 MGP_NODShiLtJ_G0037665.1 mouse_genomes_project 4 76594096 76594203 + Gm24697 snRNA snRNA MGP_NODShiLtJ_T0068370.1 MGP_NODShiLtJ_G0028785.1 mouse_genomes_project 4 153161311 153175833 - MGP_NODShiLtJ_P0068370 protein_coding protein_coding MGP_NODShiLtJ_T0068371.1 MGP_NODShiLtJ_G0028785.1 mouse_genomes_project 4 153161320 153163323 - protein_coding processed_transcript MGP_NODShiLtJ_T0017890.1 MGP_NODShiLtJ_G0015406.1 mouse_genomes_project 4 35313487 35317930 - 4933421O10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0067308.1 MGP_NODShiLtJ_G0028548.1 mouse_genomes_project 4 138323171 138353295 + Rhbdl2 protein_coding processed_transcript MGP_NODShiLtJ_T0067309.1 MGP_NODShiLtJ_G0028548.1 mouse_genomes_project 4 138323172 138374708 + MGP_NODShiLtJ_P0067309 Rhbdl2 protein_coding protein_coding MGP_NODShiLtJ_T0067310.1 MGP_NODShiLtJ_G0028548.1 mouse_genomes_project 4 138335688 138351938 + Rhbdl2 protein_coding processed_transcript MGP_NODShiLtJ_T0067311.1 MGP_NODShiLtJ_G0028548.1 mouse_genomes_project 4 138355139 138358116 + Rhbdl2 protein_coding processed_transcript MGP_NODShiLtJ_T0014417.1 MGP_NODShiLtJ_G0012525.1 mouse_genomes_project 4 54583791 54584306 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100561.1 MGP_NODShiLtJ_G0038955.1 mouse_genomes_project 4 102537840 102537972 - Gm25244 snoRNA snoRNA MGP_NODShiLtJ_T0066323.1 MGP_NODShiLtJ_G0028336.1 mouse_genomes_project 4 120521344 120532787 - MGP_NODShiLtJ_P0066323 Mrpl37 protein_coding protein_coding MGP_NODShiLtJ_T0066324.1 MGP_NODShiLtJ_G0028336.1 mouse_genomes_project 4 120521355 120525421 - Mrpl37 protein_coding retained_intron MGP_NODShiLtJ_T0066325.1 MGP_NODShiLtJ_G0028336.1 mouse_genomes_project 4 120521438 120530689 - Mrpl37 protein_coding processed_transcript MGP_NODShiLtJ_T0066326.1 MGP_NODShiLtJ_G0028336.1 mouse_genomes_project 4 120521445 120532739 - Mrpl37 protein_coding processed_transcript MGP_NODShiLtJ_T0066327.1 MGP_NODShiLtJ_G0028336.1 mouse_genomes_project 4 120530314 120531276 - Mrpl37 protein_coding retained_intron MGP_NODShiLtJ_T0014579.1 MGP_NODShiLtJ_G0012687.1 mouse_genomes_project 4 121875420 121875728 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007916.1 MGP_NODShiLtJ_G0006458.1 mouse_genomes_project 4 147414072 147418630 + Gm28874 lincRNA lincRNA MGP_NODShiLtJ_T0014309.1 MGP_NODShiLtJ_G0012417.1 mouse_genomes_project 4 15292646 15293619 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014392.1 MGP_NODShiLtJ_G0012500.1 mouse_genomes_project 4 44740033 44740430 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069001.1 MGP_NODShiLtJ_G0028947.1 mouse_genomes_project 4 166881023 166958722 + MGP_NODShiLtJ_P0069001 Clstn1 protein_coding protein_coding MGP_NODShiLtJ_T0069002.1 MGP_NODShiLtJ_G0028947.1 mouse_genomes_project 4 166881193 166957722 + MGP_NODShiLtJ_P0069002 Clstn1 protein_coding protein_coding MGP_NODShiLtJ_T0069003.1 MGP_NODShiLtJ_G0028947.1 mouse_genomes_project 4 166881803 166932324 + Clstn1 protein_coding processed_transcript MGP_NODShiLtJ_T0069004.1 MGP_NODShiLtJ_G0028947.1 mouse_genomes_project 4 166932128 166940882 + Clstn1 protein_coding retained_intron MGP_NODShiLtJ_T0010550.1 MGP_NODShiLtJ_G0008683.1 mouse_genomes_project 4 167405197 167405299 + Mir34a miRNA miRNA MGP_NODShiLtJ_T0101924.1 MGP_NODShiLtJ_G0040092.1 mouse_genomes_project 4 128657564 128677109 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014282.1 MGP_NODShiLtJ_G0012390.1 mouse_genomes_project 4 8360205 8360691 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065523.1 MGP_NODShiLtJ_G0028141.1 mouse_genomes_project 4 65284132 65319572 + MGP_NODShiLtJ_P0065523 Ugcg protein_coding protein_coding MGP_NODShiLtJ_T0065524.1 MGP_NODShiLtJ_G0028141.1 mouse_genomes_project 4 65284430 65308062 + Ugcg protein_coding processed_transcript MGP_NODShiLtJ_T0065525.1 MGP_NODShiLtJ_G0028141.1 mouse_genomes_project 4 65307578 65309770 + Ugcg protein_coding processed_transcript MGP_NODShiLtJ_T0065526.1 MGP_NODShiLtJ_G0028141.1 mouse_genomes_project 4 65308514 65310154 + Ugcg protein_coding processed_transcript MGP_NODShiLtJ_T0010535.1 MGP_NODShiLtJ_G0008668.1 mouse_genomes_project 4 152284716 152284775 - Gm22180 miRNA miRNA MGP_NODShiLtJ_T0066355.1 MGP_NODShiLtJ_G0028341.1 mouse_genomes_project 4 120677336 120687601 + MGP_NODShiLtJ_P0066355 Ldlrad1 protein_coding protein_coding MGP_NODShiLtJ_T0014301.1 MGP_NODShiLtJ_G0012409.1 mouse_genomes_project 4 14058290 14058648 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004506.1 MGP_NODShiLtJ_G0003911.1 mouse_genomes_project 4 155159807 155165058 - Gm16287 antisense antisense MGP_NODShiLtJ_T0014306.1 MGP_NODShiLtJ_G0012414.1 mouse_genomes_project 4 14512796 14513857 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099257.1 MGP_NODShiLtJ_G0037651.1 mouse_genomes_project 4 45250739 45250842 - Gm24650 snRNA snRNA MGP_NODShiLtJ_T0014637.1 MGP_NODShiLtJ_G0012745.1 mouse_genomes_project 4 138382919 138384318 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011475.1 MGP_NODShiLtJ_G0009608.1 mouse_genomes_project 4 148455648 148455936 - Gm24636 misc_RNA misc_RNA MGP_NODShiLtJ_T0100583.1 MGP_NODShiLtJ_G0038977.1 mouse_genomes_project 4 145802336 145802419 + Gm24091 snoRNA snoRNA MGP_NODShiLtJ_T0065968.1 MGP_NODShiLtJ_G0028259.1 mouse_genomes_project 4 106991255 107000157 - Plaa protein_coding processed_transcript MGP_NODShiLtJ_T0065969.1 MGP_NODShiLtJ_G0028259.1 mouse_genomes_project 4 106992908 107030876 - MGP_NODShiLtJ_P0065969 Plaa protein_coding protein_coding MGP_NODShiLtJ_T0065970.1 MGP_NODShiLtJ_G0028259.1 mouse_genomes_project 4 106995428 107007345 - MGP_NODShiLtJ_P0065970 Plaa protein_coding protein_coding MGP_NODShiLtJ_T0065971.1 MGP_NODShiLtJ_G0028259.1 mouse_genomes_project 4 106997630 107007324 - Plaa protein_coding processed_transcript MGP_NODShiLtJ_T0065972.1 MGP_NODShiLtJ_G0028259.1 mouse_genomes_project 4 107009606 107030767 - Plaa protein_coding processed_transcript MGP_NODShiLtJ_T0065973.1 MGP_NODShiLtJ_G0028259.1 mouse_genomes_project 4 107014264 107030813 - Plaa protein_coding processed_transcript MGP_NODShiLtJ_T0101135.1 MGP_NODShiLtJ_G0039469.1 mouse_genomes_project 4 65991165 65991708 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0065926.1 MGP_NODShiLtJ_G0028236.1 mouse_genomes_project 4 99737136 99737955 - MGP_NODShiLtJ_P0065926 Ifna13 protein_coding protein_coding MGP_NODShiLtJ_T0066688.1 MGP_NODShiLtJ_G0028405.1 mouse_genomes_project 4 128873692 128917963 + MGP_NODShiLtJ_P0066688 protein_coding protein_coding MGP_NODShiLtJ_T0010519.1 MGP_NODShiLtJ_G0008652.1 mouse_genomes_project 4 141379791 141379850 + Mir7119 miRNA miRNA MGP_NODShiLtJ_T0014361.1 MGP_NODShiLtJ_G0012469.1 mouse_genomes_project 4 34911110 34911270 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099263.1 MGP_NODShiLtJ_G0037657.1 mouse_genomes_project 4 54064856 54064962 + Gm22685 snRNA snRNA MGP_NODShiLtJ_T0099250.1 MGP_NODShiLtJ_G0037644.1 mouse_genomes_project 4 34215826 34215944 - Gm26254 snRNA snRNA MGP_NODShiLtJ_T0001384.1 MGP_NODShiLtJ_G0001304.1 mouse_genomes_project 4 112283417 112293020 - TEC TEC MGP_NODShiLtJ_T0010547.1 MGP_NODShiLtJ_G0008680.1 mouse_genomes_project 4 165270882 165270943 - Mir7022 miRNA miRNA MGP_NODShiLtJ_T0011445.1 MGP_NODShiLtJ_G0009578.1 mouse_genomes_project 4 9468822 9469138 + Gm22477 misc_RNA misc_RNA MGP_NODShiLtJ_T0066956.1 MGP_NODShiLtJ_G0028459.1 mouse_genomes_project 4 131569658 131572119 + MGP_NODShiLtJ_P0066956 Gm12845 protein_coding protein_coding MGP_NODShiLtJ_T0068152.1 MGP_NODShiLtJ_G0028730.1 mouse_genomes_project 4 149895709 149917815 + Pafah2 protein_coding processed_transcript MGP_NODShiLtJ_T0068153.1 MGP_NODShiLtJ_G0028730.1 mouse_genomes_project 4 149895746 149911617 + Pafah2 protein_coding processed_transcript MGP_NODShiLtJ_T0068154.1 MGP_NODShiLtJ_G0028730.1 mouse_genomes_project 4 149896615 149910823 + Pafah2 protein_coding processed_transcript MGP_NODShiLtJ_T0068155.1 MGP_NODShiLtJ_G0028730.1 mouse_genomes_project 4 149896849 149927181 + MGP_NODShiLtJ_P0068155 Pafah2 protein_coding protein_coding MGP_NODShiLtJ_T0068156.1 MGP_NODShiLtJ_G0028730.1 mouse_genomes_project 4 149902018 149904173 + MGP_NODShiLtJ_P0068156 Pafah2 protein_coding protein_coding MGP_NODShiLtJ_T0068157.1 MGP_NODShiLtJ_G0028730.1 mouse_genomes_project 4 149902076 149922260 + Pafah2 protein_coding processed_transcript MGP_NODShiLtJ_T0004532.1 MGP_NODShiLtJ_G0003931.1 mouse_genomes_project 4 166169038 166176694 + Gm17029 antisense antisense MGP_NODShiLtJ_T0004533.1 MGP_NODShiLtJ_G0003931.1 mouse_genomes_project 4 166169067 166195576 + Gm17029 antisense antisense MGP_NODShiLtJ_T0004534.1 MGP_NODShiLtJ_G0003931.1 mouse_genomes_project 4 166169101 166175730 + Gm17029 antisense antisense MGP_NODShiLtJ_T0014705.1 MGP_NODShiLtJ_G0012813.1 mouse_genomes_project 4 164886102 164886528 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014419.1 MGP_NODShiLtJ_G0012527.1 mouse_genomes_project 4 56438382 56438739 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014411.1 MGP_NODShiLtJ_G0012519.1 mouse_genomes_project 4 53389209 53389574 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101939.1 MGP_NODShiLtJ_G0040107.1 mouse_genomes_project 4 159961330 159961831 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001389.1 MGP_NODShiLtJ_G0001309.1 mouse_genomes_project 4 138910794 138912021 - TEC TEC MGP_NODShiLtJ_T0066687.1 MGP_NODShiLtJ_G0028404.1 mouse_genomes_project 4 128873669 128917968 + MGP_NODShiLtJ_P0066687 protein_coding protein_coding MGP_NODShiLtJ_T0098385.1 MGP_NODShiLtJ_G0036790.1 mouse_genomes_project 4 151009394 151010110 - Gm15979 sense_intronic sense_intronic MGP_NODShiLtJ_T0065237.1 MGP_NODShiLtJ_G0028061.1 mouse_genomes_project 4 50641888 50685381 - MGP_NODShiLtJ_P0065237 Xpa protein_coding protein_coding MGP_NODShiLtJ_T0065240.1 MGP_NODShiLtJ_G0028061.1 mouse_genomes_project 4 50661773 50672233 - Xpa protein_coding processed_transcript MGP_NODShiLtJ_T0065241.1 MGP_NODShiLtJ_G0028061.1 mouse_genomes_project 4 50661773 50672200 - MGP_NODShiLtJ_P0065241 Xpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065242.1 MGP_NODShiLtJ_G0028061.1 mouse_genomes_project 4 50661773 50685381 - MGP_NODShiLtJ_P0065242 Xpa protein_coding protein_coding MGP_NODShiLtJ_T0065243.1 MGP_NODShiLtJ_G0028061.1 mouse_genomes_project 4 50666887 50685290 - MGP_NODShiLtJ_P0065243 Xpa protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065244.1 MGP_NODShiLtJ_G0028061.1 mouse_genomes_project 4 50669519 50685374 - MGP_NODShiLtJ_P0065244 Xpa protein_coding protein_coding MGP_NODShiLtJ_T0065245.1 MGP_NODShiLtJ_G0028061.1 mouse_genomes_project 4 50670962 50673145 - Xpa protein_coding processed_transcript MGP_NODShiLtJ_T0065236.1 MGP_NODShiLtJ_G0028060.1 mouse_genomes_project 4 50624359 50658955 + MGP_NODShiLtJ_P0065236 Ncbp1 protein_coding protein_coding MGP_NODShiLtJ_T0065238.1 MGP_NODShiLtJ_G0028060.1 mouse_genomes_project 4 50644452 50646651 + Ncbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0065239.1 MGP_NODShiLtJ_G0028060.1 mouse_genomes_project 4 50651747 50658531 + Ncbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0004475.1 MGP_NODShiLtJ_G0003886.1 mouse_genomes_project 4 139573115 139577007 - 1700125G02Rik antisense antisense MGP_NODShiLtJ_T0014462.1 MGP_NODShiLtJ_G0012570.1 mouse_genomes_project 4 74589584 74590211 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064686.1 MGP_NODShiLtJ_G0027949.1 mouse_genomes_project 4 37544256 37755831 - MGP_NODShiLtJ_P0064686 Mob3b protein_coding protein_coding MGP_NODShiLtJ_T0064687.1 MGP_NODShiLtJ_G0027949.1 mouse_genomes_project 4 37677711 37755831 - Mob3b protein_coding processed_transcript MGP_NODShiLtJ_T0014626.1 MGP_NODShiLtJ_G0012734.1 mouse_genomes_project 4 135564988 135565229 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099285.1 MGP_NODShiLtJ_G0037679.1 mouse_genomes_project 4 114263883 114264047 + Gm25124 snRNA snRNA MGP_NODShiLtJ_T0065618.1 MGP_NODShiLtJ_G0028168.1 mouse_genomes_project 4 69417746 69607571 + MGP_NODShiLtJ_P0065618 Zfp618 protein_coding protein_coding MGP_NODShiLtJ_T0065619.1 MGP_NODShiLtJ_G0028168.1 mouse_genomes_project 4 69417746 69582583 + MGP_NODShiLtJ_P0065619 Zfp618 protein_coding protein_coding MGP_NODShiLtJ_T0065620.1 MGP_NODShiLtJ_G0028168.1 mouse_genomes_project 4 69417747 69601907 + MGP_NODShiLtJ_P0065620 Zfp618 protein_coding protein_coding MGP_NODShiLtJ_T0065621.1 MGP_NODShiLtJ_G0028168.1 mouse_genomes_project 4 69587234 69588263 + Zfp618 protein_coding processed_transcript MGP_NODShiLtJ_T0099317.1 MGP_NODShiLtJ_G0037711.1 mouse_genomes_project 4 153057215 153057271 + Gm25772 snRNA snRNA MGP_NODShiLtJ_T0066269.1 MGP_NODShiLtJ_G0028326.1 mouse_genomes_project 4 119893874 119902704 - MGP_NODShiLtJ_P0066269 Bsnd protein_coding protein_coding MGP_NODShiLtJ_T0065963.1 MGP_NODShiLtJ_G0028256.1 mouse_genomes_project 4 105567736 105569113 - MGP_NODShiLtJ_P0065963 Tusc1 protein_coding protein_coding MGP_NODShiLtJ_T0067058.1 MGP_NODShiLtJ_G0028480.1 mouse_genomes_project 4 132539022 132546000 + MGP_NODShiLtJ_P0067058 Ebna1bp2 protein_coding protein_coding MGP_NODShiLtJ_T0067059.1 MGP_NODShiLtJ_G0028480.1 mouse_genomes_project 4 132539071 132540155 + Ebna1bp2 protein_coding processed_transcript MGP_NODShiLtJ_T0067060.1 MGP_NODShiLtJ_G0028480.1 mouse_genomes_project 4 132539073 132539886 + Ebna1bp2 protein_coding processed_transcript MGP_NODShiLtJ_T0067061.1 MGP_NODShiLtJ_G0028480.1 mouse_genomes_project 4 132539383 132542416 + MGP_NODShiLtJ_P0067061 Ebna1bp2 protein_coding protein_coding MGP_NODShiLtJ_T0067062.1 MGP_NODShiLtJ_G0028480.1 mouse_genomes_project 4 132539449 132543842 + Ebna1bp2 protein_coding processed_transcript MGP_NODShiLtJ_T0007744.1 MGP_NODShiLtJ_G0006323.1 mouse_genomes_project 4 10784599 10808981 + Gm11820 lincRNA lincRNA MGP_NODShiLtJ_T0068272.1 MGP_NODShiLtJ_G0028758.1 mouse_genomes_project 4 151564835 151582275 + MGP_NODShiLtJ_P0068272 Hmgcl protein_coding protein_coding MGP_NODShiLtJ_T0068273.1 MGP_NODShiLtJ_G0028758.1 mouse_genomes_project 4 151564852 151580566 + Hmgcl protein_coding processed_transcript MGP_NODShiLtJ_T0068274.1 MGP_NODShiLtJ_G0028758.1 mouse_genomes_project 4 151567932 151578407 + Hmgcl protein_coding processed_transcript MGP_NODShiLtJ_T0068275.1 MGP_NODShiLtJ_G0028758.1 mouse_genomes_project 4 151579384 151582275 + Hmgcl protein_coding processed_transcript MGP_NODShiLtJ_T0068276.1 MGP_NODShiLtJ_G0028758.1 mouse_genomes_project 4 151579989 151581874 + Hmgcl protein_coding processed_transcript MGP_NODShiLtJ_T0068028.1 MGP_NODShiLtJ_G0028704.1 mouse_genomes_project 4 148918629 148926040 + MGP_NODShiLtJ_P0068028 Gpn2 protein_coding protein_coding MGP_NODShiLtJ_T0068029.1 MGP_NODShiLtJ_G0028704.1 mouse_genomes_project 4 148918686 148925790 + MGP_NODShiLtJ_P0068029 Gpn2 protein_coding protein_coding MGP_NODShiLtJ_T0068030.1 MGP_NODShiLtJ_G0028704.1 mouse_genomes_project 4 148918695 148920449 + Gpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0069111.1 MGP_NODShiLtJ_G0028967.1 mouse_genomes_project 4 168572591 168574465 + MGP_NODShiLtJ_P0069111 Gm13090 protein_coding protein_coding MGP_NODShiLtJ_T0010526.1 MGP_NODShiLtJ_G0008659.1 mouse_genomes_project 4 147576168 147576264 + Gm25707 miRNA miRNA MGP_NODShiLtJ_T0014547.1 MGP_NODShiLtJ_G0012655.1 mouse_genomes_project 4 111983521 111984240 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011468.1 MGP_NODShiLtJ_G0009601.1 mouse_genomes_project 4 122814322 122814596 - Gm23743 misc_RNA misc_RNA MGP_NODShiLtJ_T0014557.1 MGP_NODShiLtJ_G0012665.1 mouse_genomes_project 4 114336250 114336542 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068519.1 MGP_NODShiLtJ_G0028818.1 mouse_genomes_project 4 155289230 155319121 - MGP_NODShiLtJ_P0068519 Pqlc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068520.1 MGP_NODShiLtJ_G0028818.1 mouse_genomes_project 4 155293773 155319144 - MGP_NODShiLtJ_P0068520 Pqlc2 protein_coding protein_coding MGP_NODShiLtJ_T0068521.1 MGP_NODShiLtJ_G0028818.1 mouse_genomes_project 4 155293775 155319101 - MGP_NODShiLtJ_P0068521 Pqlc2 protein_coding protein_coding MGP_NODShiLtJ_T0068522.1 MGP_NODShiLtJ_G0028818.1 mouse_genomes_project 4 155293775 155319114 - MGP_NODShiLtJ_P0068522 Pqlc2 protein_coding protein_coding MGP_NODShiLtJ_T0068523.1 MGP_NODShiLtJ_G0028818.1 mouse_genomes_project 4 155296555 155319073 - MGP_NODShiLtJ_P0068523 Pqlc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014460.1 MGP_NODShiLtJ_G0012568.1 mouse_genomes_project 4 73605060 73605535 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069390.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173080312 173173506 - MGP_NODShiLtJ_P0069390 Prkcz protein_coding protein_coding MGP_NODShiLtJ_T0069391.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173081906 173189949 - MGP_NODShiLtJ_P0069391 Prkcz protein_coding protein_coding MGP_NODShiLtJ_T0069392.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173082285 173091661 - Prkcz protein_coding processed_transcript MGP_NODShiLtJ_T0069393.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173094458 173096367 - Prkcz protein_coding processed_transcript MGP_NODShiLtJ_T0069394.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173094498 173189810 - MGP_NODShiLtJ_P0069394 Prkcz protein_coding protein_coding MGP_NODShiLtJ_T0069395.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173116528 173172899 - MGP_NODShiLtJ_P0069395 Prkcz protein_coding protein_coding MGP_NODShiLtJ_T0069396.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173116531 173172996 - Prkcz protein_coding processed_transcript MGP_NODShiLtJ_T0069397.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173120257 173127151 - Prkcz protein_coding processed_transcript MGP_NODShiLtJ_T0069398.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173120332 173172474 - Prkcz protein_coding processed_transcript MGP_NODShiLtJ_T0069399.1 MGP_NODShiLtJ_G0029015.1 mouse_genomes_project 4 173183719 173189928 - MGP_NODShiLtJ_P0069399 Prkcz protein_coding protein_coding MGP_NODShiLtJ_T0068788.1 MGP_NODShiLtJ_G0028900.1 mouse_genomes_project 4 161276371 161286385 - MGP_NODShiLtJ_P0068788 Gm13124 protein_coding protein_coding MGP_NODShiLtJ_T0007968.1 MGP_NODShiLtJ_G0006500.1 mouse_genomes_project 4 173635500 173641712 + Gm26840 lincRNA lincRNA MGP_NODShiLtJ_T0014379.1 MGP_NODShiLtJ_G0012487.1 mouse_genomes_project 4 41268866 41281128 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014672.1 MGP_NODShiLtJ_G0012780.1 mouse_genomes_project 4 150980223 150980691 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065547.1 MGP_NODShiLtJ_G0028146.1 mouse_genomes_project 4 65929468 65939311 - MGP_NODShiLtJ_P0065547 Inip protein_coding protein_coding MGP_NODShiLtJ_T0065548.1 MGP_NODShiLtJ_G0028146.1 mouse_genomes_project 4 65931192 65940871 - Inip protein_coding processed_transcript MGP_NODShiLtJ_T0065549.1 MGP_NODShiLtJ_G0028146.1 mouse_genomes_project 4 65938048 65940882 - Inip protein_coding processed_transcript MGP_NODShiLtJ_T0065672.1 MGP_NODShiLtJ_G0028182.1 mouse_genomes_project 4 70260957 70279796 - MGP_NODShiLtJ_P0065672 Tnfsf15 protein_coding protein_coding MGP_NODShiLtJ_T0069439.1 MGP_NODShiLtJ_G0029022.1 mouse_genomes_project 4 173468784 173474919 + Cdk11b protein_coding processed_transcript MGP_NODShiLtJ_T0069440.1 MGP_NODShiLtJ_G0029022.1 mouse_genomes_project 4 173468799 173499113 + MGP_NODShiLtJ_P0069440 Cdk11b protein_coding protein_coding MGP_NODShiLtJ_T0069441.1 MGP_NODShiLtJ_G0029022.1 mouse_genomes_project 4 173468810 173469627 + Cdk11b protein_coding processed_transcript MGP_NODShiLtJ_T0069442.1 MGP_NODShiLtJ_G0029022.1 mouse_genomes_project 4 173468813 173499113 + MGP_NODShiLtJ_P0069442 Cdk11b protein_coding protein_coding MGP_NODShiLtJ_T0069443.1 MGP_NODShiLtJ_G0029022.1 mouse_genomes_project 4 173468840 173499113 + MGP_NODShiLtJ_P0069443 Cdk11b protein_coding protein_coding MGP_NODShiLtJ_T0069444.1 MGP_NODShiLtJ_G0029022.1 mouse_genomes_project 4 173478711 173483765 + Cdk11b protein_coding processed_transcript MGP_NODShiLtJ_T0069445.1 MGP_NODShiLtJ_G0029022.1 mouse_genomes_project 4 173496377 173497580 + Cdk11b protein_coding processed_transcript MGP_NODShiLtJ_T0069446.1 MGP_NODShiLtJ_G0029022.1 mouse_genomes_project 4 173496542 173497467 + Cdk11b protein_coding processed_transcript MGP_NODShiLtJ_T0007827.1 MGP_NODShiLtJ_G0006394.1 mouse_genomes_project 4 104408423 104440435 + lincRNA lincRNA MGP_NODShiLtJ_T0066436.1 MGP_NODShiLtJ_G0028354.1 mouse_genomes_project 4 121534024 121551323 - MGP_NODShiLtJ_P0066436 Podn protein_coding protein_coding MGP_NODShiLtJ_T0066437.1 MGP_NODShiLtJ_G0028354.1 mouse_genomes_project 4 121534026 121543545 - MGP_NODShiLtJ_P0066437 Podn protein_coding protein_coding MGP_NODShiLtJ_T0066438.1 MGP_NODShiLtJ_G0028354.1 mouse_genomes_project 4 121534030 121547935 - MGP_NODShiLtJ_P0066438 Podn protein_coding protein_coding MGP_NODShiLtJ_T0066439.1 MGP_NODShiLtJ_G0028354.1 mouse_genomes_project 4 121534084 121551186 - MGP_NODShiLtJ_P0066439 Podn protein_coding protein_coding MGP_NODShiLtJ_T0066440.1 MGP_NODShiLtJ_G0028354.1 mouse_genomes_project 4 121534087 121551187 - Podn protein_coding processed_transcript MGP_NODShiLtJ_T0066441.1 MGP_NODShiLtJ_G0028354.1 mouse_genomes_project 4 121536954 121540756 - MGP_NODShiLtJ_P0066441 Podn protein_coding protein_coding MGP_NODShiLtJ_T0066442.1 MGP_NODShiLtJ_G0028354.1 mouse_genomes_project 4 121546249 121550219 - Podn protein_coding processed_transcript MGP_NODShiLtJ_T0066443.1 MGP_NODShiLtJ_G0028354.1 mouse_genomes_project 4 121546421 121551570 - Podn protein_coding processed_transcript MGP_NODShiLtJ_T0014589.1 MGP_NODShiLtJ_G0012697.1 mouse_genomes_project 4 125392528 125393576 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064381.1 MGP_NODShiLtJ_G0027867.1 mouse_genomes_project 4 8978029 9049169 + MGP_NODShiLtJ_P0064381 1110037F02Rik protein_coding protein_coding MGP_NODShiLtJ_T0064382.1 MGP_NODShiLtJ_G0027867.1 mouse_genomes_project 4 8978029 9026340 + MGP_NODShiLtJ_P0064382 1110037F02Rik protein_coding protein_coding MGP_NODShiLtJ_T0064383.1 MGP_NODShiLtJ_G0027867.1 mouse_genomes_project 4 8978114 9049169 + MGP_NODShiLtJ_P0064383 1110037F02Rik protein_coding protein_coding MGP_NODShiLtJ_T0001377.1 MGP_NODShiLtJ_G0001297.1 mouse_genomes_project 4 14505267 14505873 + TEC TEC MGP_NODShiLtJ_T0065228.1 MGP_NODShiLtJ_G0028059.1 mouse_genomes_project 4 50599952 50624222 - MGP_NODShiLtJ_P0065228 Tstd2 protein_coding protein_coding MGP_NODShiLtJ_T0065229.1 MGP_NODShiLtJ_G0028059.1 mouse_genomes_project 4 50600884 50624185 - MGP_NODShiLtJ_P0065229 Tstd2 protein_coding protein_coding MGP_NODShiLtJ_T0065230.1 MGP_NODShiLtJ_G0028059.1 mouse_genomes_project 4 50608557 50624160 - Tstd2 protein_coding retained_intron MGP_NODShiLtJ_T0065231.1 MGP_NODShiLtJ_G0028059.1 mouse_genomes_project 4 50613852 50617670 - Tstd2 protein_coding retained_intron MGP_NODShiLtJ_T0065232.1 MGP_NODShiLtJ_G0028059.1 mouse_genomes_project 4 50617680 50624441 - MGP_NODShiLtJ_P0065232 Tstd2 protein_coding protein_coding MGP_NODShiLtJ_T0065233.1 MGP_NODShiLtJ_G0028059.1 mouse_genomes_project 4 50617743 50624156 - MGP_NODShiLtJ_P0065233 Tstd2 protein_coding protein_coding MGP_NODShiLtJ_T0065234.1 MGP_NODShiLtJ_G0028059.1 mouse_genomes_project 4 50617892 50621525 - MGP_NODShiLtJ_P0065234 Tstd2 protein_coding protein_coding MGP_NODShiLtJ_T0065235.1 MGP_NODShiLtJ_G0028059.1 mouse_genomes_project 4 50621248 50624202 - MGP_NODShiLtJ_P0065235 Tstd2 protein_coding protein_coding MGP_NODShiLtJ_T0010538.1 MGP_NODShiLtJ_G0008671.1 mouse_genomes_project 4 154054479 154054563 + Mir6399 miRNA miRNA MGP_NODShiLtJ_T0069427.1 MGP_NODShiLtJ_G0029020.1 mouse_genomes_project 4 173405028 173433420 + MGP_NODShiLtJ_P0069427 Nadk protein_coding protein_coding MGP_NODShiLtJ_T0069428.1 MGP_NODShiLtJ_G0029020.1 mouse_genomes_project 4 173406338 173433424 + MGP_NODShiLtJ_P0069428 Nadk protein_coding protein_coding MGP_NODShiLtJ_T0069429.1 MGP_NODShiLtJ_G0029020.1 mouse_genomes_project 4 173406464 173419520 + Nadk protein_coding processed_transcript MGP_NODShiLtJ_T0069430.1 MGP_NODShiLtJ_G0029020.1 mouse_genomes_project 4 173406480 173419514 + MGP_NODShiLtJ_P0069430 Nadk protein_coding protein_coding MGP_NODShiLtJ_T0069431.1 MGP_NODShiLtJ_G0029020.1 mouse_genomes_project 4 173406546 173421809 + MGP_NODShiLtJ_P0069431 Nadk protein_coding protein_coding MGP_NODShiLtJ_T0069432.1 MGP_NODShiLtJ_G0029020.1 mouse_genomes_project 4 173406710 173421763 + MGP_NODShiLtJ_P0069432 Nadk protein_coding protein_coding MGP_NODShiLtJ_T0069433.1 MGP_NODShiLtJ_G0029020.1 mouse_genomes_project 4 173424917 173433424 + MGP_NODShiLtJ_P0069433 Nadk protein_coding protein_coding MGP_NODShiLtJ_T0069434.1 MGP_NODShiLtJ_G0029020.1 mouse_genomes_project 4 173429199 173432043 + Nadk protein_coding processed_transcript MGP_NODShiLtJ_T0067617.1 MGP_NODShiLtJ_G0028621.1 mouse_genomes_project 4 144264991 144273325 - MGP_NODShiLtJ_P0067617 C77080 protein_coding protein_coding MGP_NODShiLtJ_T0067618.1 MGP_NODShiLtJ_G0028621.1 mouse_genomes_project 4 144264991 144286131 - MGP_NODShiLtJ_P0067618 C77080 protein_coding protein_coding MGP_NODShiLtJ_T0067619.1 MGP_NODShiLtJ_G0028621.1 mouse_genomes_project 4 144266868 144295291 - MGP_NODShiLtJ_P0067619 C77080 protein_coding protein_coding MGP_NODShiLtJ_T0067620.1 MGP_NODShiLtJ_G0028621.1 mouse_genomes_project 4 144270773 144310898 - MGP_NODShiLtJ_P0067620 C77080 protein_coding protein_coding MGP_NODShiLtJ_T0007866.1 MGP_NODShiLtJ_G0006424.1 mouse_genomes_project 4 129880258 129881739 + Gm12951 lincRNA lincRNA MGP_NODShiLtJ_T0065390.1 MGP_NODShiLtJ_G0028106.1 mouse_genomes_project 4 59054982 59166317 + MGP_NODShiLtJ_P0065390 Slc44a1 protein_coding protein_coding MGP_NODShiLtJ_T0065391.1 MGP_NODShiLtJ_G0028106.1 mouse_genomes_project 4 59054982 59243090 + MGP_NODShiLtJ_P0065391 Slc44a1 protein_coding protein_coding MGP_NODShiLtJ_T0065392.1 MGP_NODShiLtJ_G0028106.1 mouse_genomes_project 4 59055240 59144947 + Slc44a1 protein_coding processed_transcript MGP_NODShiLtJ_T0065393.1 MGP_NODShiLtJ_G0028106.1 mouse_genomes_project 4 59055253 59186414 + MGP_NODShiLtJ_P0065393 Slc44a1 protein_coding protein_coding MGP_NODShiLtJ_T0065394.1 MGP_NODShiLtJ_G0028106.1 mouse_genomes_project 4 59055253 59182056 + MGP_NODShiLtJ_P0065394 Slc44a1 protein_coding protein_coding MGP_NODShiLtJ_T0065395.1 MGP_NODShiLtJ_G0028106.1 mouse_genomes_project 4 59216422 59242599 + Slc44a1 protein_coding processed_transcript MGP_NODShiLtJ_T0007796.1 MGP_NODShiLtJ_G0006367.1 mouse_genomes_project 4 64672968 64694642 - lincRNA lincRNA MGP_NODShiLtJ_T0014304.1 MGP_NODShiLtJ_G0012412.1 mouse_genomes_project 4 14351177 14354650 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014443.1 MGP_NODShiLtJ_G0012551.1 mouse_genomes_project 4 62003858 62004174 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065326.1 MGP_NODShiLtJ_G0028083.1 mouse_genomes_project 4 53291493 53377254 + MGP_NODShiLtJ_P0065326 Tmeff1 protein_coding protein_coding MGP_NODShiLtJ_T0065327.1 MGP_NODShiLtJ_G0028083.1 mouse_genomes_project 4 53291684 53376208 + MGP_NODShiLtJ_P0065327 Tmeff1 protein_coding protein_coding MGP_NODShiLtJ_T0065328.1 MGP_NODShiLtJ_G0028083.1 mouse_genomes_project 4 53291870 53376593 + MGP_NODShiLtJ_P0065328 Tmeff1 protein_coding protein_coding MGP_NODShiLtJ_T0065329.1 MGP_NODShiLtJ_G0028083.1 mouse_genomes_project 4 53347295 53374362 + MGP_NODShiLtJ_P0065329 Tmeff1 protein_coding protein_coding MGP_NODShiLtJ_T0068889.1 MGP_NODShiLtJ_G0028929.1 mouse_genomes_project 4 165649687 165655024 - MGP_NODShiLtJ_P0068889 Angptl7 protein_coding protein_coding MGP_NODShiLtJ_T0010472.1 MGP_NODShiLtJ_G0008605.1 mouse_genomes_project 4 11009728 11009794 - Gm26250 miRNA miRNA MGP_NODShiLtJ_T0069019.1 MGP_NODShiLtJ_G0028949.1 mouse_genomes_project 4 167032319 167055753 - MGP_NODShiLtJ_P0069019 Tmem201 protein_coding protein_coding MGP_NODShiLtJ_T0069020.1 MGP_NODShiLtJ_G0028949.1 mouse_genomes_project 4 167032327 167055753 - MGP_NODShiLtJ_P0069020 Tmem201 protein_coding protein_coding MGP_NODShiLtJ_T0069021.1 MGP_NODShiLtJ_G0028949.1 mouse_genomes_project 4 167042325 167048364 - Tmem201 protein_coding retained_intron MGP_NODShiLtJ_T0069022.1 MGP_NODShiLtJ_G0028949.1 mouse_genomes_project 4 167042325 167055753 - MGP_NODShiLtJ_P0069022 Tmem201 protein_coding protein_coding MGP_NODShiLtJ_T0069023.1 MGP_NODShiLtJ_G0028949.1 mouse_genomes_project 4 167046245 167055707 - Tmem201 protein_coding retained_intron MGP_NODShiLtJ_T0069024.1 MGP_NODShiLtJ_G0028949.1 mouse_genomes_project 4 167048840 167055479 - Tmem201 protein_coding processed_transcript MGP_NODShiLtJ_T0007787.1 MGP_NODShiLtJ_G0006360.1 mouse_genomes_project 4 61347221 61391594 + Gm12511 lincRNA lincRNA MGP_NODShiLtJ_T0098377.1 MGP_NODShiLtJ_G0036782.1 mouse_genomes_project 4 34478521 34492580 + Bach2it1 sense_intronic sense_intronic MGP_NODShiLtJ_T0014399.1 MGP_NODShiLtJ_G0012507.1 mouse_genomes_project 4 48723844 48724261 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067469.1 MGP_NODShiLtJ_G0028589.1 mouse_genomes_project 4 141513175 141546094 + MGP_NODShiLtJ_P0067469 Psmb2 protein_coding protein_coding MGP_NODShiLtJ_T0067470.1 MGP_NODShiLtJ_G0028589.1 mouse_genomes_project 4 141513224 141522803 + Psmb2 protein_coding processed_transcript MGP_NODShiLtJ_T0067471.1 MGP_NODShiLtJ_G0028589.1 mouse_genomes_project 4 141513249 141544142 + Psmb2 protein_coding processed_transcript MGP_NODShiLtJ_T0014363.1 MGP_NODShiLtJ_G0012471.1 mouse_genomes_project 4 35246679 35247024 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014566.1 MGP_NODShiLtJ_G0012674.1 mouse_genomes_project 4 118244361 118244629 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004379.1 MGP_NODShiLtJ_G0003813.1 mouse_genomes_project 4 43321819 43384344 - Gm17094 antisense antisense MGP_NODShiLtJ_T0100567.1 MGP_NODShiLtJ_G0038961.1 mouse_genomes_project 4 119513796 119513909 - Gm26047 snoRNA snoRNA MGP_NODShiLtJ_T0010539.1 MGP_NODShiLtJ_G0008672.1 mouse_genomes_project 4 154228788 154228857 - Mir7019 miRNA miRNA MGP_NODShiLtJ_T0068787.1 MGP_NODShiLtJ_G0028899.1 mouse_genomes_project 4 161240786 161250118 + MGP_NODShiLtJ_P0068787 9430007A20Rik protein_coding protein_coding MGP_NODShiLtJ_T0099306.1 MGP_NODShiLtJ_G0037700.1 mouse_genomes_project 4 142189257 142189360 - Gm22221 snRNA snRNA MGP_NODShiLtJ_T0014614.1 MGP_NODShiLtJ_G0012722.1 mouse_genomes_project 4 132715615 132716110 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014550.1 MGP_NODShiLtJ_G0012658.1 mouse_genomes_project 4 112345557 112346556 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014716.1 MGP_NODShiLtJ_G0012824.1 mouse_genomes_project 4 168302670 168304886 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014558.1 MGP_NODShiLtJ_G0012666.1 mouse_genomes_project 4 114361382 114362096 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064307.1 MGP_NODShiLtJ_G0027856.1 mouse_genomes_project 4 6509716 6522681 + Clvs1 protein_coding processed_transcript MGP_NODShiLtJ_T0064308.1 MGP_NODShiLtJ_G0027856.1 mouse_genomes_project 4 6509740 6597580 + Clvs1 protein_coding processed_transcript MGP_NODShiLtJ_T0064309.1 MGP_NODShiLtJ_G0027856.1 mouse_genomes_project 4 6509740 6698488 + MGP_NODShiLtJ_P0064309 Clvs1 protein_coding protein_coding MGP_NODShiLtJ_T0064310.1 MGP_NODShiLtJ_G0027856.1 mouse_genomes_project 4 6509753 6522679 + Clvs1 protein_coding processed_transcript MGP_NODShiLtJ_T0064311.1 MGP_NODShiLtJ_G0027856.1 mouse_genomes_project 4 6509770 6521841 + Clvs1 protein_coding processed_transcript MGP_NODShiLtJ_T0064312.1 MGP_NODShiLtJ_G0027856.1 mouse_genomes_project 4 6511871 6698488 + MGP_NODShiLtJ_P0064312 Clvs1 protein_coding protein_coding MGP_NODShiLtJ_T0064313.1 MGP_NODShiLtJ_G0027856.1 mouse_genomes_project 4 6553765 6677339 + Clvs1 protein_coding processed_transcript MGP_NODShiLtJ_T0064314.1 MGP_NODShiLtJ_G0027856.1 mouse_genomes_project 4 6577614 6677376 + Clvs1 protein_coding processed_transcript MGP_NODShiLtJ_T0007822.1 MGP_NODShiLtJ_G0006390.1 mouse_genomes_project 4 100403270 100442187 - Gm12606 lincRNA lincRNA MGP_NODShiLtJ_T0007823.1 MGP_NODShiLtJ_G0006390.1 mouse_genomes_project 4 100403288 100443008 - Gm12606 lincRNA lincRNA MGP_NODShiLtJ_T0017889.1 MGP_NODShiLtJ_G0015405.1 mouse_genomes_project 4 25143654 25489383 + processed_transcript processed_transcript MGP_NODShiLtJ_T0099276.1 MGP_NODShiLtJ_G0037670.1 mouse_genomes_project 4 104931558 104931666 - Gm22605 snRNA snRNA MGP_NODShiLtJ_T0014310.1 MGP_NODShiLtJ_G0012418.1 mouse_genomes_project 4 15306884 15307363 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065377.1 MGP_NODShiLtJ_G0028101.1 mouse_genomes_project 4 58482132 58483094 - MGP_NODShiLtJ_P0065377 Olfr272 protein_coding protein_coding MGP_NODShiLtJ_T0065378.1 MGP_NODShiLtJ_G0028101.1 mouse_genomes_project 4 58482132 58490490 - MGP_NODShiLtJ_P0065378 Olfr272 protein_coding protein_coding MGP_NODShiLtJ_T0017914.1 MGP_NODShiLtJ_G0015422.1 mouse_genomes_project 4 100613258 100657049 + Gm12610 processed_transcript processed_transcript MGP_NODShiLtJ_T0007772.1 MGP_NODShiLtJ_G0006349.1 mouse_genomes_project 4 50171944 50173197 + Gm12410 lincRNA lincRNA MGP_NODShiLtJ_T0014562.1 MGP_NODShiLtJ_G0012670.1 mouse_genomes_project 4 116272713 116272929 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067791.1 MGP_NODShiLtJ_G0028654.1 mouse_genomes_project 4 145470065 145517007 - MGP_NODShiLtJ_P0067791 Zcchc17 protein_coding protein_coding MGP_NODShiLtJ_T0067792.1 MGP_NODShiLtJ_G0028654.1 mouse_genomes_project 4 145470961 145473422 - Zcchc17 protein_coding processed_transcript MGP_NODShiLtJ_T0067793.1 MGP_NODShiLtJ_G0028654.1 mouse_genomes_project 4 145471377 145501919 - Zcchc17 protein_coding processed_transcript MGP_NODShiLtJ_T0067794.1 MGP_NODShiLtJ_G0028654.1 mouse_genomes_project 4 145493968 145495697 - Zcchc17 protein_coding processed_transcript MGP_NODShiLtJ_T0067795.1 MGP_NODShiLtJ_G0028654.1 mouse_genomes_project 4 145509227 145516980 - Zcchc17 protein_coding retained_intron MGP_NODShiLtJ_T0065930.1 MGP_NODShiLtJ_G0028240.1 mouse_genomes_project 4 99810663 99815832 - MGP_NODShiLtJ_P0065930 Klhl9 protein_coding protein_coding MGP_NODShiLtJ_T0064236.1 MGP_NODShiLtJ_G0027841.1 mouse_genomes_project 4 609829 650675 - MGP_NODShiLtJ_P0064236 Plag1 protein_coding protein_coding MGP_NODShiLtJ_T0064237.1 MGP_NODShiLtJ_G0027841.1 mouse_genomes_project 4 615157 650698 - MGP_NODShiLtJ_P0064237 Plag1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064238.1 MGP_NODShiLtJ_G0027841.1 mouse_genomes_project 4 615816 650716 - MGP_NODShiLtJ_P0064238 Plag1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064239.1 MGP_NODShiLtJ_G0027841.1 mouse_genomes_project 4 623068 650686 - Plag1 protein_coding retained_intron MGP_NODShiLtJ_T0064579.1 MGP_NODShiLtJ_G0027922.1 mouse_genomes_project 4 34462933 34830171 + MGP_NODShiLtJ_P0064579 Bach2 protein_coding protein_coding MGP_NODShiLtJ_T0064580.1 MGP_NODShiLtJ_G0027922.1 mouse_genomes_project 4 34463079 34825286 + MGP_NODShiLtJ_P0064580 Bach2 protein_coding protein_coding MGP_NODShiLtJ_T0064581.1 MGP_NODShiLtJ_G0027922.1 mouse_genomes_project 4 34463206 34742534 + Bach2 protein_coding processed_transcript MGP_NODShiLtJ_T0064582.1 MGP_NODShiLtJ_G0027922.1 mouse_genomes_project 4 34473130 34548146 + Bach2 protein_coding processed_transcript MGP_NODShiLtJ_T0064583.1 MGP_NODShiLtJ_G0027922.1 mouse_genomes_project 4 34654067 34830175 + MGP_NODShiLtJ_P0064583 Bach2 protein_coding protein_coding MGP_NODShiLtJ_T0064584.1 MGP_NODShiLtJ_G0027922.1 mouse_genomes_project 4 34742402 34743524 + Bach2 protein_coding processed_transcript MGP_NODShiLtJ_T0064585.1 MGP_NODShiLtJ_G0027922.1 mouse_genomes_project 4 34817758 34823925 + Bach2 protein_coding processed_transcript MGP_NODShiLtJ_T0011705.1 MGP_NODShiLtJ_G0009828.1 mouse_genomes_project 4 132267589 132270370 + MGP_NODShiLtJ_P0011705 Hyi polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011706.1 MGP_NODShiLtJ_G0009828.1 mouse_genomes_project 4 132267598 132268919 + Hyi polymorphic_pseudogene retained_intron MGP_NODShiLtJ_T0011707.1 MGP_NODShiLtJ_G0009828.1 mouse_genomes_project 4 132267598 132270370 + MGP_NODShiLtJ_P0011707 Hyi polymorphic_pseudogene nonsense_mediated_decay MGP_NODShiLtJ_T0011708.1 MGP_NODShiLtJ_G0009828.1 mouse_genomes_project 4 132267613 132270370 + MGP_NODShiLtJ_P0011708 Hyi polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0011709.1 MGP_NODShiLtJ_G0009828.1 mouse_genomes_project 4 132268941 132270121 + Hyi polymorphic_pseudogene retained_intron MGP_NODShiLtJ_T0067022.1 MGP_NODShiLtJ_G0009828.1 mouse_genomes_project 4 132267632 132270377 + MGP_NODShiLtJ_P0067022 Hyi polymorphic_pseudogene unknown_likely_coding MGP_NODShiLtJ_T0014412.1 MGP_NODShiLtJ_G0012520.1 mouse_genomes_project 4 53473466 53473802 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014384.1 MGP_NODShiLtJ_G0012492.1 mouse_genomes_project 4 43181196 43181957 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067645.1 MGP_NODShiLtJ_G0028628.1 mouse_genomes_project 4 144570078 144572069 - MGP_NODShiLtJ_P0067645 Tssk3 protein_coding protein_coding MGP_NODShiLtJ_T0004407.1 MGP_NODShiLtJ_G0003838.1 mouse_genomes_project 4 80126087 80126769 + Gm11250 antisense antisense MGP_NODShiLtJ_T0064653.1 MGP_NODShiLtJ_G0027941.1 mouse_genomes_project 4 37109439 37157698 + MGP_NODShiLtJ_P0064653 Rars2 protein_coding protein_coding MGP_NODShiLtJ_T0064654.1 MGP_NODShiLtJ_G0027941.1 mouse_genomes_project 4 37109443 37113388 + Rars2 protein_coding processed_transcript MGP_NODShiLtJ_T0064655.1 MGP_NODShiLtJ_G0027941.1 mouse_genomes_project 4 37109451 37119933 + Rars2 protein_coding processed_transcript MGP_NODShiLtJ_T0064656.1 MGP_NODShiLtJ_G0027941.1 mouse_genomes_project 4 37109456 37157694 + Rars2 protein_coding processed_transcript MGP_NODShiLtJ_T0064657.1 MGP_NODShiLtJ_G0027941.1 mouse_genomes_project 4 37109458 37125058 + MGP_NODShiLtJ_P0064657 Rars2 protein_coding protein_coding MGP_NODShiLtJ_T0064658.1 MGP_NODShiLtJ_G0027941.1 mouse_genomes_project 4 37109460 37117925 + Rars2 protein_coding processed_transcript MGP_NODShiLtJ_T0064659.1 MGP_NODShiLtJ_G0027941.1 mouse_genomes_project 4 37144368 37153692 + Rars2 protein_coding processed_transcript MGP_NODShiLtJ_T0014458.1 MGP_NODShiLtJ_G0012566.1 mouse_genomes_project 4 71736269 71736627 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065275.1 MGP_NODShiLtJ_G0028071.1 mouse_genomes_project 4 51580665 51624619 - MGP_NODShiLtJ_P0065275 Anks6 protein_coding protein_coding MGP_NODShiLtJ_T0065276.1 MGP_NODShiLtJ_G0028071.1 mouse_genomes_project 4 51580685 51624619 - MGP_NODShiLtJ_P0065276 Anks6 protein_coding protein_coding MGP_NODShiLtJ_T0065277.1 MGP_NODShiLtJ_G0028071.1 mouse_genomes_project 4 51581996 51590707 - Anks6 protein_coding processed_transcript MGP_NODShiLtJ_T0065278.1 MGP_NODShiLtJ_G0028071.1 mouse_genomes_project 4 51603421 51605140 - Anks6 protein_coding processed_transcript MGP_NODShiLtJ_T0067077.1 MGP_NODShiLtJ_G0028493.1 mouse_genomes_project 4 133103224 133132508 + MGP_NODShiLtJ_P0067077 Slc2a1 protein_coding protein_coding MGP_NODShiLtJ_T0067078.1 MGP_NODShiLtJ_G0028493.1 mouse_genomes_project 4 133103317 133127123 + MGP_NODShiLtJ_P0067078 Slc2a1 protein_coding protein_coding MGP_NODShiLtJ_T0067079.1 MGP_NODShiLtJ_G0028493.1 mouse_genomes_project 4 133103372 133127095 + MGP_NODShiLtJ_P0067079 Slc2a1 protein_coding protein_coding MGP_NODShiLtJ_T0067080.1 MGP_NODShiLtJ_G0028493.1 mouse_genomes_project 4 133103427 133131855 + MGP_NODShiLtJ_P0067080 Slc2a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066739.1 MGP_NODShiLtJ_G0028420.1 mouse_genomes_project 4 129651697 129709296 - Faah protein_coding retained_intron MGP_NODShiLtJ_T0066740.1 MGP_NODShiLtJ_G0028420.1 mouse_genomes_project 4 129685021 129709337 - Faah protein_coding retained_intron MGP_NODShiLtJ_T0066741.1 MGP_NODShiLtJ_G0028420.1 mouse_genomes_project 4 129685021 129709547 - MGP_NODShiLtJ_P0066741 Faah protein_coding protein_coding MGP_NODShiLtJ_T0066742.1 MGP_NODShiLtJ_G0028420.1 mouse_genomes_project 4 129686545 129709348 - Faah protein_coding retained_intron MGP_NODShiLtJ_T0066743.1 MGP_NODShiLtJ_G0028420.1 mouse_genomes_project 4 129686658 129688421 - Faah protein_coding retained_intron MGP_NODShiLtJ_T0066744.1 MGP_NODShiLtJ_G0028420.1 mouse_genomes_project 4 129687066 129688290 - Faah protein_coding retained_intron MGP_NODShiLtJ_T0066745.1 MGP_NODShiLtJ_G0028420.1 mouse_genomes_project 4 129690077 129709296 - Faah protein_coding processed_transcript MGP_NODShiLtJ_T0066746.1 MGP_NODShiLtJ_G0028420.1 mouse_genomes_project 4 129694082 129709318 - Faah protein_coding processed_transcript MGP_NODShiLtJ_T0066815.1 MGP_NODShiLtJ_G0028434.1 mouse_genomes_project 4 130343446 130346994 + Ccdc17 protein_coding processed_transcript MGP_NODShiLtJ_T0066816.1 MGP_NODShiLtJ_G0028434.1 mouse_genomes_project 4 130343522 130347059 + MGP_NODShiLtJ_P0066816 Ccdc17 protein_coding protein_coding MGP_NODShiLtJ_T0066817.1 MGP_NODShiLtJ_G0028434.1 mouse_genomes_project 4 130343595 130344993 + Ccdc17 protein_coding processed_transcript MGP_NODShiLtJ_T0066818.1 MGP_NODShiLtJ_G0028434.1 mouse_genomes_project 4 130344552 130347015 + Ccdc17 protein_coding processed_transcript MGP_NODShiLtJ_T0066819.1 MGP_NODShiLtJ_G0028434.1 mouse_genomes_project 4 130345284 130345957 + Ccdc17 protein_coding processed_transcript MGP_NODShiLtJ_T0065742.1 MGP_NODShiLtJ_G0028201.1 mouse_genomes_project 4 90145401 90145878 + MGP_NODShiLtJ_P0065742 protein_coding protein_coding MGP_NODShiLtJ_T0068586.1 MGP_NODShiLtJ_G0028835.1 mouse_genomes_project 4 157007776 157041886 - MGP_NODShiLtJ_P0068586 Padi1 protein_coding protein_coding MGP_NODShiLtJ_T0069596.1 MGP_NODShiLtJ_G0029053.1 mouse_genomes_project 4 174111818 174117314 + MGP_NODShiLtJ_P0069596 Perm1 protein_coding protein_coding MGP_NODShiLtJ_T0067917.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147732944 147745127 + MGP_NODShiLtJ_P0067917 Dnajc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067918.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147732944 147754214 + MGP_NODShiLtJ_P0067918 Dnajc8 protein_coding protein_coding MGP_NODShiLtJ_T0067919.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147732961 147754133 + Dnajc8 protein_coding retained_intron MGP_NODShiLtJ_T0067920.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147732970 147742696 + MGP_NODShiLtJ_P0067920 Dnajc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067921.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147732971 147753669 + MGP_NODShiLtJ_P0067921 Dnajc8 protein_coding protein_coding MGP_NODShiLtJ_T0067922.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147732975 147751099 + MGP_NODShiLtJ_P0067922 Dnajc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067923.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147732975 147753692 + MGP_NODShiLtJ_P0067923 Dnajc8 protein_coding protein_coding MGP_NODShiLtJ_T0067924.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147733034 147753611 + MGP_NODShiLtJ_P0067924 Dnajc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067925.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147733053 147753930 + MGP_NODShiLtJ_P0067925 Dnajc8 protein_coding protein_coding MGP_NODShiLtJ_T0067926.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147733422 147743113 + Dnajc8 protein_coding retained_intron MGP_NODShiLtJ_T0067927.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147745139 147753666 + MGP_NODShiLtJ_P0067927 Dnajc8 protein_coding protein_coding MGP_NODShiLtJ_T0067928.1 MGP_NODShiLtJ_G0028678.1 mouse_genomes_project 4 147751789 147753915 + Dnajc8 protein_coding retained_intron MGP_NODShiLtJ_T0067965.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148279680 148331193 + Ahdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067966.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148279926 148350077 + MGP_NODShiLtJ_P0067966 Ahdc1 protein_coding protein_coding MGP_NODShiLtJ_T0067967.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148279926 148350324 + MGP_NODShiLtJ_P0067967 Ahdc1 protein_coding protein_coding MGP_NODShiLtJ_T0067968.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148279963 148331484 + Ahdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067969.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148279985 148325665 + Ahdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067970.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148280258 148349866 + Ahdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067971.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148280470 148331195 + Ahdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067972.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148280512 148332149 + Ahdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067973.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148280624 148349867 + MGP_NODShiLtJ_P0067973 Ahdc1 protein_coding protein_coding MGP_NODShiLtJ_T0067974.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148310063 148348782 + MGP_NODShiLtJ_P0067974 Ahdc1 protein_coding protein_coding MGP_NODShiLtJ_T0067975.1 MGP_NODShiLtJ_G0028689.1 mouse_genomes_project 4 148336624 148343607 + Ahdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0007773.1 MGP_NODShiLtJ_G0006350.1 mouse_genomes_project 4 51573312 51575778 - Gm568 lincRNA lincRNA MGP_NODShiLtJ_T0100579.1 MGP_NODShiLtJ_G0038973.1 mouse_genomes_project 4 137777716 137777847 + Gm22154 snoRNA snoRNA MGP_NODShiLtJ_T0067542.1 MGP_NODShiLtJ_G0028608.1 mouse_genomes_project 4 143608252 143611429 - MGP_NODShiLtJ_P0067542 Tlr12 protein_coding protein_coding MGP_NODShiLtJ_T0067543.1 MGP_NODShiLtJ_G0028608.1 mouse_genomes_project 4 143610311 143611402 - Tlr12 protein_coding processed_transcript MGP_NODShiLtJ_T0066466.1 MGP_NODShiLtJ_G0028357.1 mouse_genomes_project 4 121723676 121762752 - MGP_NODShiLtJ_P0066466 Zyg11a protein_coding protein_coding MGP_NODShiLtJ_T0066467.1 MGP_NODShiLtJ_G0028357.1 mouse_genomes_project 4 121723676 121762727 - MGP_NODShiLtJ_P0066467 Zyg11a protein_coding protein_coding MGP_NODShiLtJ_T0014542.1 MGP_NODShiLtJ_G0012650.1 mouse_genomes_project 4 110295800 110296467 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068557.1 MGP_NODShiLtJ_G0028827.1 mouse_genomes_project 4 155784811 155892711 - MGP_NODShiLtJ_P0068557 Pax7 protein_coding protein_coding MGP_NODShiLtJ_T0068558.1 MGP_NODShiLtJ_G0028827.1 mouse_genomes_project 4 155788456 155891189 - MGP_NODShiLtJ_P0068558 Pax7 protein_coding protein_coding MGP_NODShiLtJ_T0100578.1 MGP_NODShiLtJ_G0038972.1 mouse_genomes_project 4 137775083 137775214 + Gm25788 snoRNA snoRNA MGP_NODShiLtJ_T0064685.1 MGP_NODShiLtJ_G0027948.1 mouse_genomes_project 4 37532199 37532541 - MGP_NODShiLtJ_P0064685 protein_coding protein_coding MGP_NODShiLtJ_T0014514.1 MGP_NODShiLtJ_G0012622.1 mouse_genomes_project 4 96024310 96024622 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069300.1 MGP_NODShiLtJ_G0028999.1 mouse_genomes_project 4 172049322 172076254 - Arhgef16 protein_coding retained_intron MGP_NODShiLtJ_T0069301.1 MGP_NODShiLtJ_G0028999.1 mouse_genomes_project 4 172049322 172053332 - Arhgef16 protein_coding retained_intron MGP_NODShiLtJ_T0069302.1 MGP_NODShiLtJ_G0028999.1 mouse_genomes_project 4 172049322 172076416 - MGP_NODShiLtJ_P0069302 Arhgef16 protein_coding protein_coding MGP_NODShiLtJ_T0069303.1 MGP_NODShiLtJ_G0028999.1 mouse_genomes_project 4 172049586 172078023 - MGP_NODShiLtJ_P0069303 Arhgef16 protein_coding protein_coding MGP_NODShiLtJ_T0069304.1 MGP_NODShiLtJ_G0028999.1 mouse_genomes_project 4 172052850 172059096 - Arhgef16 protein_coding processed_transcript MGP_NODShiLtJ_T0069305.1 MGP_NODShiLtJ_G0028999.1 mouse_genomes_project 4 172059047 172076254 - MGP_NODShiLtJ_P0069305 Arhgef16 protein_coding protein_coding MGP_NODShiLtJ_T0069306.1 MGP_NODShiLtJ_G0028999.1 mouse_genomes_project 4 172063076 172078036 - MGP_NODShiLtJ_P0069306 Arhgef16 protein_coding protein_coding MGP_NODShiLtJ_T0014509.1 MGP_NODShiLtJ_G0012617.1 mouse_genomes_project 4 95121680 95121987 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014568.1 MGP_NODShiLtJ_G0012676.1 mouse_genomes_project 4 118854950 118855401 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004369.1 MGP_NODShiLtJ_G0003805.1 mouse_genomes_project 4 12888263 12912469 + Gm11837 antisense antisense MGP_NODShiLtJ_T0014522.1 MGP_NODShiLtJ_G0012630.1 mouse_genomes_project 4 101715424 101717129 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014499.1 MGP_NODShiLtJ_G0012607.1 mouse_genomes_project 4 90146510 90147029 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010506.1 MGP_NODShiLtJ_G0008639.1 mouse_genomes_project 4 120925705 120925790 + Gm24804 miRNA miRNA MGP_NODShiLtJ_T0066476.1 MGP_NODShiLtJ_G0028361.1 mouse_genomes_project 4 121962899 121970843 - MGP_NODShiLtJ_P0066476 Gpx7 protein_coding protein_coding MGP_NODShiLtJ_T0066477.1 MGP_NODShiLtJ_G0028361.1 mouse_genomes_project 4 121963358 121970606 - MGP_NODShiLtJ_P0066477 Gpx7 protein_coding protein_coding MGP_NODShiLtJ_T0004414.1 MGP_NODShiLtJ_G0003845.1 mouse_genomes_project 4 99834595 99840027 - Gm13274 antisense antisense MGP_NODShiLtJ_T0004415.1 MGP_NODShiLtJ_G0003845.1 mouse_genomes_project 4 99834688 99840026 - Gm13274 antisense antisense MGP_NODShiLtJ_T0069380.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173066850 173073474 + Faap20 protein_coding processed_transcript MGP_NODShiLtJ_T0069381.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173066909 173068001 + Faap20 protein_coding processed_transcript MGP_NODShiLtJ_T0069382.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173066925 173067859 + Faap20 protein_coding processed_transcript MGP_NODShiLtJ_T0069383.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173066945 173073518 + Faap20 protein_coding processed_transcript MGP_NODShiLtJ_T0069384.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173067014 173073742 + MGP_NODShiLtJ_P0069384 Faap20 protein_coding protein_coding MGP_NODShiLtJ_T0069385.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173067014 173073738 + MGP_NODShiLtJ_P0069385 Faap20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069386.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173067037 173073438 + MGP_NODShiLtJ_P0069386 Faap20 protein_coding protein_coding MGP_NODShiLtJ_T0069387.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173067051 173073739 + MGP_NODShiLtJ_P0069387 Faap20 protein_coding protein_coding MGP_NODShiLtJ_T0069388.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173067380 173073473 + MGP_NODShiLtJ_P0069388 Faap20 protein_coding protein_coding MGP_NODShiLtJ_T0069389.1 MGP_NODShiLtJ_G0029014.1 mouse_genomes_project 4 173067744 173073503 + Faap20 protein_coding retained_intron MGP_NODShiLtJ_T0068658.1 MGP_NODShiLtJ_G0028853.1 mouse_genomes_project 4 157705048 157727343 + MGP_NODShiLtJ_P0068658 Zbtb17 protein_coding protein_coding MGP_NODShiLtJ_T0068659.1 MGP_NODShiLtJ_G0028853.1 mouse_genomes_project 4 157705078 157728048 + Zbtb17 protein_coding processed_transcript MGP_NODShiLtJ_T0068660.1 MGP_NODShiLtJ_G0028853.1 mouse_genomes_project 4 157705093 157727343 + Zbtb17 protein_coding processed_transcript MGP_NODShiLtJ_T0068661.1 MGP_NODShiLtJ_G0028853.1 mouse_genomes_project 4 157705100 157719440 + Zbtb17 protein_coding processed_transcript MGP_NODShiLtJ_T0068662.1 MGP_NODShiLtJ_G0028853.1 mouse_genomes_project 4 157723500 157725165 + Zbtb17 protein_coding processed_transcript MGP_NODShiLtJ_T0068663.1 MGP_NODShiLtJ_G0028853.1 mouse_genomes_project 4 157724935 157726186 + Zbtb17 protein_coding processed_transcript MGP_NODShiLtJ_T0068664.1 MGP_NODShiLtJ_G0028853.1 mouse_genomes_project 4 157725532 157727187 + Zbtb17 protein_coding processed_transcript MGP_NODShiLtJ_T0067982.1 MGP_NODShiLtJ_G0028691.1 mouse_genomes_project 4 148495215 148497733 - MGP_NODShiLtJ_P0067982 Gpr3 protein_coding protein_coding MGP_NODShiLtJ_T0067983.1 MGP_NODShiLtJ_G0028691.1 mouse_genomes_project 4 148496242 148498411 - MGP_NODShiLtJ_P0067983 Gpr3 protein_coding protein_coding MGP_NODShiLtJ_T0067984.1 MGP_NODShiLtJ_G0028691.1 mouse_genomes_project 4 148496945 148498189 - MGP_NODShiLtJ_P0067984 Gpr3 protein_coding protein_coding MGP_NODShiLtJ_T0001398.1 MGP_NODShiLtJ_G0001317.1 mouse_genomes_project 4 161686968 161688662 - TEC TEC MGP_NODShiLtJ_T0064389.1 MGP_NODShiLtJ_G0027869.1 mouse_genomes_project 4 9083360 9099180 + MGP_NODShiLtJ_P0064389 Fsbp protein_coding protein_coding MGP_NODShiLtJ_T0014316.1 MGP_NODShiLtJ_G0012424.1 mouse_genomes_project 4 18016145 18017083 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014689.1 MGP_NODShiLtJ_G0012797.1 mouse_genomes_project 4 157610702 157610906 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068943.1 MGP_NODShiLtJ_G0028936.1 mouse_genomes_project 4 166169276 166319634 - MGP_NODShiLtJ_P0068943 Pex14 protein_coding protein_coding MGP_NODShiLtJ_T0068944.1 MGP_NODShiLtJ_G0028936.1 mouse_genomes_project 4 166171978 166319574 - Pex14 protein_coding retained_intron MGP_NODShiLtJ_T0068945.1 MGP_NODShiLtJ_G0028936.1 mouse_genomes_project 4 166194258 166319573 - Pex14 protein_coding processed_transcript MGP_NODShiLtJ_T0068946.1 MGP_NODShiLtJ_G0028936.1 mouse_genomes_project 4 166195009 166319567 - MGP_NODShiLtJ_P0068946 Pex14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068947.1 MGP_NODShiLtJ_G0028936.1 mouse_genomes_project 4 166228171 166319586 - Pex14 protein_coding processed_transcript MGP_NODShiLtJ_T0066692.1 MGP_NODShiLtJ_G0028408.1 mouse_genomes_project 4 129124084 129303364 + MGP_NODShiLtJ_P0066692 protein_coding protein_coding MGP_NODShiLtJ_T0066695.1 MGP_NODShiLtJ_G0028408.1 mouse_genomes_project 4 129124133 129303362 + MGP_NODShiLtJ_P0066695 protein_coding protein_coding MGP_NODShiLtJ_T0066698.1 MGP_NODShiLtJ_G0028408.1 mouse_genomes_project 4 129216054 129227369 + MGP_NODShiLtJ_P0066698 protein_coding protein_coding MGP_NODShiLtJ_T0066700.1 MGP_NODShiLtJ_G0028408.1 mouse_genomes_project 4 129258230 129260338 + MGP_NODShiLtJ_P0066700 protein_coding protein_coding MGP_NODShiLtJ_T0068906.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165774464 165791603 - MGP_NODShiLtJ_P0068906 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068907.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165774464 165791626 - MGP_NODShiLtJ_P0068907 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068908.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165774464 165791603 - MGP_NODShiLtJ_P0068908 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068909.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165774464 165791603 - MGP_NODShiLtJ_P0068909 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068910.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165774469 165791369 - MGP_NODShiLtJ_P0068910 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068911.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165774470 165778223 - Tardbp protein_coding processed_transcript MGP_NODShiLtJ_T0068912.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165774470 165782322 - MGP_NODShiLtJ_P0068912 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068913.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165774567 165782831 - MGP_NODShiLtJ_P0068913 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068914.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165777550 165781626 - Tardbp protein_coding processed_transcript MGP_NODShiLtJ_T0068915.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165777694 165780744 - Tardbp protein_coding processed_transcript MGP_NODShiLtJ_T0068916.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165777843 165781403 - Tardbp protein_coding processed_transcript MGP_NODShiLtJ_T0068917.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165778003 165791372 - MGP_NODShiLtJ_P0068917 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068918.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165779130 165782231 - MGP_NODShiLtJ_P0068918 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068919.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780423 165781918 - MGP_NODShiLtJ_P0068919 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068920.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780503 165785545 - MGP_NODShiLtJ_P0068920 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068921.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780508 165784245 - MGP_NODShiLtJ_P0068921 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068922.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780512 165791365 - MGP_NODShiLtJ_P0068922 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068923.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780512 165784240 - MGP_NODShiLtJ_P0068923 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068924.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780513 165782905 - MGP_NODShiLtJ_P0068924 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068925.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780513 165791365 - MGP_NODShiLtJ_P0068925 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068926.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780650 165784167 - MGP_NODShiLtJ_P0068926 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068927.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165780858 165782841 - MGP_NODShiLtJ_P0068927 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068928.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165781001 165788944 - MGP_NODShiLtJ_P0068928 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068929.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165781104 165788944 - MGP_NODShiLtJ_P0068929 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068930.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165781104 165788944 - MGP_NODShiLtJ_P0068930 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068931.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165781158 165785652 - MGP_NODShiLtJ_P0068931 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068932.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165781585 165791377 - MGP_NODShiLtJ_P0068932 Tardbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068933.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165782155 165791361 - MGP_NODShiLtJ_P0068933 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068934.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165784242 165790933 - MGP_NODShiLtJ_P0068934 Tardbp protein_coding protein_coding MGP_NODShiLtJ_T0068935.1 MGP_NODShiLtJ_G0028933.1 mouse_genomes_project 4 165788666 165791365 - Tardbp protein_coding retained_intron MGP_NODShiLtJ_T0069595.1 MGP_NODShiLtJ_G0029052.1 mouse_genomes_project 4 174091244 174093092 + MGP_NODShiLtJ_P0069595 AW011738 protein_coding protein_coding MGP_NODShiLtJ_T0067810.1 MGP_NODShiLtJ_G0028658.1 mouse_genomes_project 4 145832982 145868931 + MGP_NODShiLtJ_P0067810 Sdc3 protein_coding protein_coding MGP_NODShiLtJ_T0067811.1 MGP_NODShiLtJ_G0028658.1 mouse_genomes_project 4 145833149 145859885 + Sdc3 protein_coding retained_intron MGP_NODShiLtJ_T0067812.1 MGP_NODShiLtJ_G0028658.1 mouse_genomes_project 4 145853058 145861671 + MGP_NODShiLtJ_P0067812 Sdc3 protein_coding protein_coding MGP_NODShiLtJ_T0067813.1 MGP_NODShiLtJ_G0028658.1 mouse_genomes_project 4 145856917 145861671 + MGP_NODShiLtJ_P0067813 Sdc3 protein_coding protein_coding MGP_NODShiLtJ_T0067814.1 MGP_NODShiLtJ_G0028658.1 mouse_genomes_project 4 145859456 145864862 + Sdc3 protein_coding retained_intron MGP_NODShiLtJ_T0017923.1 MGP_NODShiLtJ_G0015429.1 mouse_genomes_project 4 116749525 116761216 - Gm12720 processed_transcript processed_transcript MGP_NODShiLtJ_T0099298.1 MGP_NODShiLtJ_G0037692.1 mouse_genomes_project 4 131038500 131038616 + Gm23287 snRNA snRNA MGP_NODShiLtJ_T0065532.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65587635 65672229 - MGP_NODShiLtJ_P0065532 Ptbp3 protein_coding protein_coding MGP_NODShiLtJ_T0065533.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65590912 65672100 - MGP_NODShiLtJ_P0065533 Ptbp3 protein_coding protein_coding MGP_NODShiLtJ_T0065534.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65590964 65599678 - Ptbp3 protein_coding retained_intron MGP_NODShiLtJ_T0065535.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65595470 65608228 - MGP_NODShiLtJ_P0065535 Ptbp3 protein_coding protein_coding MGP_NODShiLtJ_T0065536.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65595475 65672197 - MGP_NODShiLtJ_P0065536 Ptbp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065537.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65608131 65672202 - MGP_NODShiLtJ_P0065537 Ptbp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065538.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65608181 65672210 - MGP_NODShiLtJ_P0065538 Ptbp3 protein_coding protein_coding MGP_NODShiLtJ_T0065539.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65617297 65632388 - Ptbp3 protein_coding retained_intron MGP_NODShiLtJ_T0065540.1 MGP_NODShiLtJ_G0028143.1 mouse_genomes_project 4 65636076 65671682 - MGP_NODShiLtJ_P0065540 Ptbp3 protein_coding protein_coding MGP_NODShiLtJ_T0065335.1 MGP_NODShiLtJ_G0028087.1 mouse_genomes_project 4 54256375 54267135 - MGP_NODShiLtJ_P0065335 protein_coding protein_coding MGP_NODShiLtJ_T0065337.1 MGP_NODShiLtJ_G0028087.1 mouse_genomes_project 4 54266966 54288985 - MGP_NODShiLtJ_P0065337 protein_coding protein_coding MGP_NODShiLtJ_T0065338.1 MGP_NODShiLtJ_G0028087.1 mouse_genomes_project 4 54275346 54288952 - protein_coding processed_transcript MGP_NODShiLtJ_T0065444.1 MGP_NODShiLtJ_G0028120.1 mouse_genomes_project 4 62769571 62852993 - MGP_NODShiLtJ_P0065444 Tmem245 protein_coding protein_coding MGP_NODShiLtJ_T0065445.1 MGP_NODShiLtJ_G0028120.1 mouse_genomes_project 4 62781973 62843485 - Tmem245 protein_coding processed_transcript MGP_NODShiLtJ_T0065446.1 MGP_NODShiLtJ_G0028120.1 mouse_genomes_project 4 62781973 62826967 - MGP_NODShiLtJ_P0065446 Tmem245 protein_coding protein_coding MGP_NODShiLtJ_T0065447.1 MGP_NODShiLtJ_G0028120.1 mouse_genomes_project 4 62782344 62852967 - MGP_NODShiLtJ_P0065447 Tmem245 protein_coding protein_coding MGP_NODShiLtJ_T0065448.1 MGP_NODShiLtJ_G0028120.1 mouse_genomes_project 4 62787713 62852980 - Tmem245 protein_coding processed_transcript MGP_NODShiLtJ_T0064766.1 MGP_NODShiLtJ_G0027969.1 mouse_genomes_project 4 45185571 45195591 - MGP_NODShiLtJ_P0064766 Nol6 protein_coding protein_coding MGP_NODShiLtJ_T0064767.1 MGP_NODShiLtJ_G0027969.1 mouse_genomes_project 4 45192475 45194444 - Nol6 protein_coding processed_transcript MGP_NODShiLtJ_T0064768.1 MGP_NODShiLtJ_G0027969.1 mouse_genomes_project 4 45192691 45194679 - Nol6 protein_coding processed_transcript MGP_NODShiLtJ_T0064769.1 MGP_NODShiLtJ_G0027969.1 mouse_genomes_project 4 45193023 45193899 - Nol6 protein_coding processed_transcript MGP_NODShiLtJ_T0014688.1 MGP_NODShiLtJ_G0012796.1 mouse_genomes_project 4 157291117 157291932 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065475.1 MGP_NODShiLtJ_G0028127.1 mouse_genomes_project 4 63876537 63884026 - MGP_NODShiLtJ_P0065475 D630039A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0067392.1 MGP_NODShiLtJ_G0028573.1 mouse_genomes_project 4 140834263 140868674 + MGP_NODShiLtJ_P0067392 Oscp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067393.1 MGP_NODShiLtJ_G0028573.1 mouse_genomes_project 4 140834504 140868666 + MGP_NODShiLtJ_P0067393 Oscp1 protein_coding protein_coding MGP_NODShiLtJ_T0067394.1 MGP_NODShiLtJ_G0028573.1 mouse_genomes_project 4 140840680 140864931 + Oscp1 protein_coding processed_transcript MGP_NODShiLtJ_T0067395.1 MGP_NODShiLtJ_G0028573.1 mouse_genomes_project 4 140858931 140860430 + Oscp1 protein_coding processed_transcript MGP_NODShiLtJ_T0067396.1 MGP_NODShiLtJ_G0028573.1 mouse_genomes_project 4 140864168 140865149 + Oscp1 protein_coding processed_transcript MGP_NODShiLtJ_T0099249.1 MGP_NODShiLtJ_G0037643.1 mouse_genomes_project 4 33314611 33314715 - Gm25705 snRNA snRNA MGP_NODShiLtJ_T0014469.1 MGP_NODShiLtJ_G0012577.1 mouse_genomes_project 4 78803472 78803943 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007955.1 MGP_NODShiLtJ_G0006487.1 mouse_genomes_project 4 165900762 165903672 + Gm13203 lincRNA lincRNA MGP_NODShiLtJ_T0014288.1 MGP_NODShiLtJ_G0012396.1 mouse_genomes_project 4 9683049 9683324 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065896.1 MGP_NODShiLtJ_G0028227.1 mouse_genomes_project 4 98785452 99059794 - MGP_NODShiLtJ_P0065896 Mllt3 protein_coding protein_coding MGP_NODShiLtJ_T0065897.1 MGP_NODShiLtJ_G0028227.1 mouse_genomes_project 4 98788200 98823784 - MGP_NODShiLtJ_P0065897 Mllt3 protein_coding protein_coding MGP_NODShiLtJ_T0065898.1 MGP_NODShiLtJ_G0028227.1 mouse_genomes_project 4 98789443 98823793 - MGP_NODShiLtJ_P0065898 Mllt3 protein_coding protein_coding MGP_NODShiLtJ_T0065899.1 MGP_NODShiLtJ_G0028227.1 mouse_genomes_project 4 98789480 98823764 - MGP_NODShiLtJ_P0065899 Mllt3 protein_coding protein_coding MGP_NODShiLtJ_T0065900.1 MGP_NODShiLtJ_G0028227.1 mouse_genomes_project 4 98808169 99059711 - Mllt3 protein_coding processed_transcript MGP_NODShiLtJ_T0065901.1 MGP_NODShiLtJ_G0028227.1 mouse_genomes_project 4 98849251 98893809 - Mllt3 protein_coding processed_transcript MGP_NODShiLtJ_T0065902.1 MGP_NODShiLtJ_G0028227.1 mouse_genomes_project 4 98853889 99058084 - Mllt3 protein_coding retained_intron MGP_NODShiLtJ_T0065903.1 MGP_NODShiLtJ_G0028227.1 mouse_genomes_project 4 98857554 99058084 - MGP_NODShiLtJ_P0065903 Mllt3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014439.1 MGP_NODShiLtJ_G0012547.1 mouse_genomes_project 4 61041834 61042077 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004492.1 MGP_NODShiLtJ_G0003900.1 mouse_genomes_project 4 149278523 149283233 + Gm12977 antisense antisense MGP_NODShiLtJ_T0004493.1 MGP_NODShiLtJ_G0003900.1 mouse_genomes_project 4 149279177 149282459 + Gm12977 antisense antisense MGP_NODShiLtJ_T0007936.1 MGP_NODShiLtJ_G0006469.1 mouse_genomes_project 4 152871963 152877948 - Gm13003 lincRNA lincRNA MGP_NODShiLtJ_T0007834.1 MGP_NODShiLtJ_G0006400.1 mouse_genomes_project 4 112038549 112053178 - Gm12681 lincRNA lincRNA MGP_NODShiLtJ_T0010491.1 MGP_NODShiLtJ_G0008624.1 mouse_genomes_project 4 52873337 52873434 - Mir1958 miRNA miRNA MGP_NODShiLtJ_T0064885.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47214054 47232546 - Fancg protein_coding retained_intron MGP_NODShiLtJ_T0064886.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47214054 47232413 - MGP_NODShiLtJ_P0064886 Fancg protein_coding protein_coding MGP_NODShiLtJ_T0064887.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47214636 47215648 - Fancg protein_coding retained_intron MGP_NODShiLtJ_T0064888.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47214725 47228609 - Fancg protein_coding processed_transcript MGP_NODShiLtJ_T0064889.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47214974 47228654 - Fancg protein_coding processed_transcript MGP_NODShiLtJ_T0064890.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47215628 47228920 - Fancg protein_coding processed_transcript MGP_NODShiLtJ_T0064891.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47227345 47231212 - Fancg protein_coding processed_transcript MGP_NODShiLtJ_T0064892.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47231119 47232228 - Fancg protein_coding retained_intron MGP_NODShiLtJ_T0064893.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47231216 47232280 - Fancg protein_coding retained_intron MGP_NODShiLtJ_T0064894.1 MGP_NODShiLtJ_G0028001.1 mouse_genomes_project 4 47232100 47232564 - Fancg protein_coding processed_transcript MGP_NODShiLtJ_T0014681.1 MGP_NODShiLtJ_G0012789.1 mouse_genomes_project 4 152281755 152284717 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007754.1 MGP_NODShiLtJ_G0006332.1 mouse_genomes_project 4 24530993 24531502 - Gm27243 lincRNA lincRNA MGP_NODShiLtJ_T0066589.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123981089 124073884 - MGP_NODShiLtJ_P0066589 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066590.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123981104 124073246 - MGP_NODShiLtJ_P0066590 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066591.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123981104 124149536 - MGP_NODShiLtJ_P0066591 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066592.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123981104 124076628 - MGP_NODShiLtJ_P0066592 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066593.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123981104 124073246 - MGP_NODShiLtJ_P0066593 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066594.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123981104 124079091 - MGP_NODShiLtJ_P0066594 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066595.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123981104 124073884 - MGP_NODShiLtJ_P0066595 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066596.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123985582 124003123 - Elavl4 protein_coding processed_transcript MGP_NODShiLtJ_T0066597.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 123993232 124072973 - MGP_NODShiLtJ_P0066597 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066598.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 124005555 124060503 - Elavl4 protein_coding processed_transcript MGP_NODShiLtJ_T0066599.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 124006584 124073884 - MGP_NODShiLtJ_P0066599 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0066600.1 MGP_NODShiLtJ_G0028383.1 mouse_genomes_project 4 124035207 124077250 - MGP_NODShiLtJ_P0066600 Elavl4 protein_coding protein_coding MGP_NODShiLtJ_T0007733.1 MGP_NODShiLtJ_G0006316.1 mouse_genomes_project 4 6507746 6510339 - Gm26548 lincRNA lincRNA MGP_NODShiLtJ_T0100585.1 MGP_NODShiLtJ_G0038979.1 mouse_genomes_project 4 145902118 145902248 - Gm22660 snoRNA snoRNA MGP_NODShiLtJ_T0014366.1 MGP_NODShiLtJ_G0012474.1 mouse_genomes_project 4 35520382 35520572 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064414.1 MGP_NODShiLtJ_G0027877.1 mouse_genomes_project 4 9748231 9766295 - MGP_NODShiLtJ_P0064414 Fam92a protein_coding protein_coding MGP_NODShiLtJ_T0064415.1 MGP_NODShiLtJ_G0027877.1 mouse_genomes_project 4 9748231 9766275 - MGP_NODShiLtJ_P0064415 Fam92a protein_coding protein_coding MGP_NODShiLtJ_T0064416.1 MGP_NODShiLtJ_G0027877.1 mouse_genomes_project 4 9748293 9765448 - MGP_NODShiLtJ_P0064416 Fam92a protein_coding protein_coding MGP_NODShiLtJ_T0064417.1 MGP_NODShiLtJ_G0027877.1 mouse_genomes_project 4 9756741 9766151 - MGP_NODShiLtJ_P0064417 Fam92a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064418.1 MGP_NODShiLtJ_G0027877.1 mouse_genomes_project 4 9757978 9766275 - Fam92a protein_coding retained_intron MGP_NODShiLtJ_T0004500.1 MGP_NODShiLtJ_G0003907.1 mouse_genomes_project 4 153481477 153491854 - Rap1gapos antisense antisense MGP_NODShiLtJ_T0068791.1 MGP_NODShiLtJ_G0028903.1 mouse_genomes_project 4 161426793 161455172 - MGP_NODShiLtJ_P0068791 Gm13178 protein_coding protein_coding MGP_NODShiLtJ_T0065223.1 MGP_NODShiLtJ_G0028058.1 mouse_genomes_project 4 50521036 50601185 + MGP_NODShiLtJ_P0065223 Tmod1 protein_coding protein_coding MGP_NODShiLtJ_T0065224.1 MGP_NODShiLtJ_G0028058.1 mouse_genomes_project 4 50521310 50576141 + MGP_NODShiLtJ_P0065224 Tmod1 protein_coding protein_coding MGP_NODShiLtJ_T0065225.1 MGP_NODShiLtJ_G0028058.1 mouse_genomes_project 4 50561544 50584952 + Tmod1 protein_coding processed_transcript MGP_NODShiLtJ_T0065226.1 MGP_NODShiLtJ_G0028058.1 mouse_genomes_project 4 50568100 50576125 + Tmod1 protein_coding processed_transcript MGP_NODShiLtJ_T0065227.1 MGP_NODShiLtJ_G0028058.1 mouse_genomes_project 4 50585486 50599646 + Tmod1 protein_coding processed_transcript MGP_NODShiLtJ_T0065810.1 MGP_NODShiLtJ_G0028214.1 mouse_genomes_project 4 94158314 94525274 + MGP_NODShiLtJ_P0065810 Ccdc171 protein_coding protein_coding MGP_NODShiLtJ_T0065811.1 MGP_NODShiLtJ_G0028214.1 mouse_genomes_project 4 94158383 94189926 + MGP_NODShiLtJ_P0065811 Ccdc171 protein_coding protein_coding MGP_NODShiLtJ_T0065812.1 MGP_NODShiLtJ_G0028214.1 mouse_genomes_project 4 94158408 94525189 + MGP_NODShiLtJ_P0065812 Ccdc171 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065813.1 MGP_NODShiLtJ_G0028214.1 mouse_genomes_project 4 94168665 94525051 + MGP_NODShiLtJ_P0065813 Ccdc171 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065814.1 MGP_NODShiLtJ_G0028214.1 mouse_genomes_project 4 94184069 94193601 + Ccdc171 protein_coding processed_transcript MGP_NODShiLtJ_T0065815.1 MGP_NODShiLtJ_G0028214.1 mouse_genomes_project 4 94344620 94454108 + Ccdc171 protein_coding processed_transcript MGP_NODShiLtJ_T0014284.1 MGP_NODShiLtJ_G0012392.1 mouse_genomes_project 4 8602537 8603100 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004519.1 MGP_NODShiLtJ_G0003922.1 mouse_genomes_project 4 158335230 158347260 + 4930455G09Rik antisense antisense MGP_NODShiLtJ_T0007768.1 MGP_NODShiLtJ_G0006346.1 mouse_genomes_project 4 49323912 49328454 + Gm12678 lincRNA lincRNA MGP_NODShiLtJ_T0004510.1 MGP_NODShiLtJ_G0003915.1 mouse_genomes_project 4 157330296 157332764 + 4921514A10Rik antisense antisense MGP_NODShiLtJ_T0099303.1 MGP_NODShiLtJ_G0037697.1 mouse_genomes_project 4 139361110 139361213 - Gm24480 snRNA snRNA MGP_NODShiLtJ_T0069279.1 MGP_NODShiLtJ_G0028995.1 mouse_genomes_project 4 171804684 171855721 - MGP_NODShiLtJ_P0069279 Trp73 protein_coding protein_coding MGP_NODShiLtJ_T0069280.1 MGP_NODShiLtJ_G0028995.1 mouse_genomes_project 4 171804691 171847208 - MGP_NODShiLtJ_P0069280 Trp73 protein_coding protein_coding MGP_NODShiLtJ_T0069281.1 MGP_NODShiLtJ_G0028995.1 mouse_genomes_project 4 171806950 171847208 - MGP_NODShiLtJ_P0069281 Trp73 protein_coding protein_coding MGP_NODShiLtJ_T0069282.1 MGP_NODShiLtJ_G0028995.1 mouse_genomes_project 4 171807427 171847202 - MGP_NODShiLtJ_P0069282 Trp73 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069283.1 MGP_NODShiLtJ_G0028995.1 mouse_genomes_project 4 171812871 171835355 - MGP_NODShiLtJ_P0069283 Trp73 protein_coding protein_coding MGP_NODShiLtJ_T0069284.1 MGP_NODShiLtJ_G0028995.1 mouse_genomes_project 4 171816119 171868071 - MGP_NODShiLtJ_P0069284 Trp73 protein_coding protein_coding MGP_NODShiLtJ_T0065911.1 MGP_NODShiLtJ_G0028229.1 mouse_genomes_project 4 99454805 99503416 - MGP_NODShiLtJ_P0065911 Hacd4 protein_coding protein_coding MGP_NODShiLtJ_T0065914.1 MGP_NODShiLtJ_G0028229.1 mouse_genomes_project 4 99471647 99503429 - MGP_NODShiLtJ_P0065914 Hacd4 protein_coding protein_coding MGP_NODShiLtJ_T0065915.1 MGP_NODShiLtJ_G0028229.1 mouse_genomes_project 4 99474236 99503427 - MGP_NODShiLtJ_P0065915 Hacd4 protein_coding protein_coding MGP_NODShiLtJ_T0069041.1 MGP_NODShiLtJ_G0028954.1 mouse_genomes_project 4 167464046 167491322 + MGP_NODShiLtJ_P0069041 Slc2a5 protein_coding protein_coding MGP_NODShiLtJ_T0069042.1 MGP_NODShiLtJ_G0028954.1 mouse_genomes_project 4 167474618 167487195 + Slc2a5 protein_coding processed_transcript MGP_NODShiLtJ_T0069043.1 MGP_NODShiLtJ_G0028954.1 mouse_genomes_project 4 167486507 167489405 + Slc2a5 protein_coding retained_intron MGP_NODShiLtJ_T0069044.1 MGP_NODShiLtJ_G0028954.1 mouse_genomes_project 4 167486708 167489990 + Slc2a5 protein_coding processed_transcript MGP_NODShiLtJ_T0065637.1 MGP_NODShiLtJ_G0028172.1 mouse_genomes_project 4 69839146 69843871 + MGP_NODShiLtJ_P0065637 Orm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065638.1 MGP_NODShiLtJ_G0028172.1 mouse_genomes_project 4 69839212 69843871 + MGP_NODShiLtJ_P0065638 Orm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0004488.1 MGP_NODShiLtJ_G0003896.1 mouse_genomes_project 4 145867005 145868925 - Gm26716 antisense antisense MGP_NODShiLtJ_T0004541.1 MGP_NODShiLtJ_G0003937.1 mouse_genomes_project 4 167066823 167067753 + Gm13068 antisense antisense MGP_NODShiLtJ_T0004542.1 MGP_NODShiLtJ_G0003937.1 mouse_genomes_project 4 167066823 167067878 + Gm13068 antisense antisense MGP_NODShiLtJ_T0007757.1 MGP_NODShiLtJ_G0006335.1 mouse_genomes_project 4 30631502 30632560 + Gm11916 lincRNA lincRNA MGP_NODShiLtJ_T0011454.1 MGP_NODShiLtJ_G0009587.1 mouse_genomes_project 4 52209845 52209972 + Gm27601 misc_RNA misc_RNA MGP_NODShiLtJ_T0007841.1 MGP_NODShiLtJ_G0006407.1 mouse_genomes_project 4 114351147 114411929 + 0610043K17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007843.1 MGP_NODShiLtJ_G0006407.1 mouse_genomes_project 4 114366974 114397453 + 0610043K17Rik lincRNA lincRNA MGP_NODShiLtJ_T0010482.1 MGP_NODShiLtJ_G0008615.1 mouse_genomes_project 4 39612686 39612763 - Mir873a miRNA miRNA MGP_NODShiLtJ_T0007774.1 MGP_NODShiLtJ_G0006351.1 mouse_genomes_project 4 52637266 52639072 + Gm12434 lincRNA lincRNA MGP_NODShiLtJ_T0069025.1 MGP_NODShiLtJ_G0028950.1 mouse_genomes_project 4 167061768 167091515 - MGP_NODShiLtJ_P0069025 Slc25a33 protein_coding protein_coding MGP_NODShiLtJ_T0065451.1 MGP_NODShiLtJ_G0028122.1 mouse_genomes_project 4 62903116 63058599 - MGP_NODShiLtJ_P0065451 protein_coding protein_coding MGP_NODShiLtJ_T0065452.1 MGP_NODShiLtJ_G0028122.1 mouse_genomes_project 4 62906822 62939417 - MGP_NODShiLtJ_P0065452 protein_coding protein_coding MGP_NODShiLtJ_T0065453.1 MGP_NODShiLtJ_G0028122.1 mouse_genomes_project 4 62973408 63058599 - MGP_NODShiLtJ_P0065453 protein_coding protein_coding MGP_NODShiLtJ_T0065454.1 MGP_NODShiLtJ_G0028122.1 mouse_genomes_project 4 62974712 62982233 - protein_coding processed_transcript MGP_NODShiLtJ_T0065455.1 MGP_NODShiLtJ_G0028122.1 mouse_genomes_project 4 62984973 63016319 - protein_coding processed_transcript MGP_NODShiLtJ_T0065456.1 MGP_NODShiLtJ_G0028122.1 mouse_genomes_project 4 62990548 63053491 - protein_coding processed_transcript MGP_NODShiLtJ_T0065457.1 MGP_NODShiLtJ_G0028122.1 mouse_genomes_project 4 62999679 63034317 - protein_coding processed_transcript MGP_NODShiLtJ_T0100590.1 MGP_NODShiLtJ_G0038984.1 mouse_genomes_project 4 147468642 147468783 + Snora61 snoRNA snoRNA MGP_NODShiLtJ_T0069133.1 MGP_NODShiLtJ_G0028972.1 mouse_genomes_project 4 169561284 169569172 - MGP_NODShiLtJ_P0069133 Zbtb48 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069134.1 MGP_NODShiLtJ_G0028972.1 mouse_genomes_project 4 169561284 169569172 - MGP_NODShiLtJ_P0069134 Zbtb48 protein_coding protein_coding MGP_NODShiLtJ_T0069135.1 MGP_NODShiLtJ_G0028972.1 mouse_genomes_project 4 169561286 169569182 - Zbtb48 protein_coding retained_intron MGP_NODShiLtJ_T0069136.1 MGP_NODShiLtJ_G0028972.1 mouse_genomes_project 4 169561310 169562127 - Zbtb48 protein_coding processed_transcript MGP_NODShiLtJ_T0069137.1 MGP_NODShiLtJ_G0028972.1 mouse_genomes_project 4 169562619 169563617 - Zbtb48 protein_coding processed_transcript MGP_NODShiLtJ_T0069138.1 MGP_NODShiLtJ_G0028972.1 mouse_genomes_project 4 169563102 169567955 - MGP_NODShiLtJ_P0069138 Zbtb48 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069139.1 MGP_NODShiLtJ_G0028972.1 mouse_genomes_project 4 169563996 169567558 - Zbtb48 protein_coding retained_intron MGP_NODShiLtJ_T0069140.1 MGP_NODShiLtJ_G0028972.1 mouse_genomes_project 4 169567988 169569148 - MGP_NODShiLtJ_P0069140 Zbtb48 protein_coding protein_coding MGP_NODShiLtJ_T0100521.1 MGP_NODShiLtJ_G0038915.1 mouse_genomes_project 4 25738684 25738809 - Gm25975 snoRNA snoRNA MGP_NODShiLtJ_T0067230.1 MGP_NODShiLtJ_G0028528.1 mouse_genomes_project 4 135315588 135369163 - MGP_NODShiLtJ_P0067230 Rlf protein_coding protein_coding MGP_NODShiLtJ_T0067231.1 MGP_NODShiLtJ_G0028528.1 mouse_genomes_project 4 135316099 135397427 - MGP_NODShiLtJ_P0067231 Rlf protein_coding protein_coding MGP_NODShiLtJ_T0067232.1 MGP_NODShiLtJ_G0028528.1 mouse_genomes_project 4 135350361 135370044 - MGP_NODShiLtJ_P0067232 Rlf protein_coding protein_coding MGP_NODShiLtJ_T0099284.1 MGP_NODShiLtJ_G0037678.1 mouse_genomes_project 4 114171493 114171597 + Gm24468 snRNA snRNA MGP_NODShiLtJ_T0068789.1 MGP_NODShiLtJ_G0028901.1 mouse_genomes_project 4 161344303 161353983 - MGP_NODShiLtJ_P0068789 Gm13177 protein_coding protein_coding MGP_NODShiLtJ_T0067152.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133598962 133643138 + MGP_NODShiLtJ_P0067152 Foxj3 protein_coding protein_coding MGP_NODShiLtJ_T0067153.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133601619 133709819 + MGP_NODShiLtJ_P0067153 Foxj3 protein_coding protein_coding MGP_NODShiLtJ_T0067154.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133601643 133660925 + MGP_NODShiLtJ_P0067154 Foxj3 protein_coding protein_coding MGP_NODShiLtJ_T0067155.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133601646 133709819 + MGP_NODShiLtJ_P0067155 Foxj3 protein_coding protein_coding MGP_NODShiLtJ_T0067156.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133601650 133680196 + Foxj3 protein_coding retained_intron MGP_NODShiLtJ_T0067157.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133601656 133660934 + MGP_NODShiLtJ_P0067157 Foxj3 protein_coding protein_coding MGP_NODShiLtJ_T0067158.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133601665 133629931 + Foxj3 protein_coding retained_intron MGP_NODShiLtJ_T0067159.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133601737 133643165 + MGP_NODShiLtJ_P0067159 Foxj3 protein_coding protein_coding MGP_NODShiLtJ_T0067160.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133602480 133643266 + MGP_NODShiLtJ_P0067160 Foxj3 protein_coding protein_coding MGP_NODShiLtJ_T0067161.1 MGP_NODShiLtJ_G0028508.1 mouse_genomes_project 4 133700293 133702364 + Foxj3 protein_coding processed_transcript MGP_NODShiLtJ_T0100526.1 MGP_NODShiLtJ_G0038920.1 mouse_genomes_project 4 43210590 43210716 + Gm23607 snoRNA snoRNA MGP_NODShiLtJ_T0014649.1 MGP_NODShiLtJ_G0012757.1 mouse_genomes_project 4 141916290 141916510 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014434.1 MGP_NODShiLtJ_G0012542.1 mouse_genomes_project 4 60379666 60380234 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100598.1 MGP_NODShiLtJ_G0038992.1 mouse_genomes_project 4 171888318 171888462 + Gm26036 snoRNA snoRNA MGP_NODShiLtJ_T0014446.1 MGP_NODShiLtJ_G0012554.1 mouse_genomes_project 4 63393873 63395862 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067223.1 MGP_NODShiLtJ_G0028525.1 mouse_genomes_project 4 135196195 135212110 + MGP_NODShiLtJ_P0067223 Col9a2 protein_coding protein_coding MGP_NODShiLtJ_T0067224.1 MGP_NODShiLtJ_G0028525.1 mouse_genomes_project 4 135196558 135201151 + Col9a2 protein_coding retained_intron MGP_NODShiLtJ_T0067225.1 MGP_NODShiLtJ_G0028525.1 mouse_genomes_project 4 135209786 135211607 + Col9a2 protein_coding processed_transcript MGP_NODShiLtJ_T0069418.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173328500 173401916 + MGP_NODShiLtJ_P0069418 Gnb1 protein_coding protein_coding MGP_NODShiLtJ_T0069419.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173328503 173401916 + MGP_NODShiLtJ_P0069419 Gnb1 protein_coding protein_coding MGP_NODShiLtJ_T0069420.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173328509 173401916 + MGP_NODShiLtJ_P0069420 Gnb1 protein_coding protein_coding MGP_NODShiLtJ_T0069421.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173330047 173384820 + MGP_NODShiLtJ_P0069421 Gnb1 protein_coding protein_coding MGP_NODShiLtJ_T0069422.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173359952 173397584 + MGP_NODShiLtJ_P0069422 Gnb1 protein_coding protein_coding MGP_NODShiLtJ_T0069423.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173360126 173381817 + Gnb1 protein_coding retained_intron MGP_NODShiLtJ_T0069424.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173365119 173401914 + MGP_NODShiLtJ_P0069424 Gnb1 protein_coding protein_coding MGP_NODShiLtJ_T0069425.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173384660 173397653 + Gnb1 protein_coding retained_intron MGP_NODShiLtJ_T0069426.1 MGP_NODShiLtJ_G0029019.1 mouse_genomes_project 4 173395685 173400303 + Gnb1 protein_coding retained_intron MGP_NODShiLtJ_T0014423.1 MGP_NODShiLtJ_G0012531.1 mouse_genomes_project 4 57704451 57705201 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014324.1 MGP_NODShiLtJ_G0012432.1 mouse_genomes_project 4 21728411 21728810 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004384.1 MGP_NODShiLtJ_G0003818.1 mouse_genomes_project 4 47757580 47761908 - Gm12454 antisense antisense MGP_NODShiLtJ_T0004385.1 MGP_NODShiLtJ_G0003818.1 mouse_genomes_project 4 47758809 47761931 - Gm12454 antisense antisense MGP_NODShiLtJ_T0014609.1 MGP_NODShiLtJ_G0012717.1 mouse_genomes_project 4 131622847 131623162 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065554.1 MGP_NODShiLtJ_G0028148.1 mouse_genomes_project 4 66067306 66077247 - MGP_NODShiLtJ_P0065554 Slc46a2 protein_coding protein_coding MGP_NODShiLtJ_T0068880.1 MGP_NODShiLtJ_G0028925.1 mouse_genomes_project 4 165286177 165291939 + MGP_NODShiLtJ_P0068880 Fbxo2 protein_coding protein_coding MGP_NODShiLtJ_T0067529.1 MGP_NODShiLtJ_G0028605.1 mouse_genomes_project 4 142950547 143327228 + Csmd2 protein_coding processed_transcript MGP_NODShiLtJ_T0067530.1 MGP_NODShiLtJ_G0028605.1 mouse_genomes_project 4 142950769 143410719 + Csmd2 protein_coding retained_intron MGP_NODShiLtJ_T0067531.1 MGP_NODShiLtJ_G0028605.1 mouse_genomes_project 4 142950795 143557023 + MGP_NODShiLtJ_P0067531 Csmd2 protein_coding protein_coding MGP_NODShiLtJ_T0067533.1 MGP_NODShiLtJ_G0028605.1 mouse_genomes_project 4 143462685 143486029 + Csmd2 protein_coding processed_transcript MGP_NODShiLtJ_T0067534.1 MGP_NODShiLtJ_G0028605.1 mouse_genomes_project 4 143506585 143517870 + Csmd2 protein_coding processed_transcript MGP_NODShiLtJ_T0067535.1 MGP_NODShiLtJ_G0028605.1 mouse_genomes_project 4 143537283 143542095 + Csmd2 protein_coding processed_transcript MGP_NODShiLtJ_T0067783.1 MGP_NODShiLtJ_G0028651.1 mouse_genomes_project 4 145397352 145411900 - MGP_NODShiLtJ_P0067783 Serinc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067784.1 MGP_NODShiLtJ_G0028651.1 mouse_genomes_project 4 145397358 145421736 - MGP_NODShiLtJ_P0067784 Serinc2 protein_coding protein_coding MGP_NODShiLtJ_T0067785.1 MGP_NODShiLtJ_G0028651.1 mouse_genomes_project 4 145397358 145422104 - MGP_NODShiLtJ_P0067785 Serinc2 protein_coding protein_coding MGP_NODShiLtJ_T0067786.1 MGP_NODShiLtJ_G0028651.1 mouse_genomes_project 4 145397762 145425701 - MGP_NODShiLtJ_P0067786 Serinc2 protein_coding protein_coding MGP_NODShiLtJ_T0067787.1 MGP_NODShiLtJ_G0028651.1 mouse_genomes_project 4 145408453 145422050 - MGP_NODShiLtJ_P0067787 Serinc2 protein_coding protein_coding MGP_NODShiLtJ_T0067788.1 MGP_NODShiLtJ_G0028651.1 mouse_genomes_project 4 145409068 145422063 - MGP_NODShiLtJ_P0067788 Serinc2 protein_coding protein_coding MGP_NODShiLtJ_T0100597.1 MGP_NODShiLtJ_G0038991.1 mouse_genomes_project 4 171596081 171596213 + Gm25880 snoRNA snoRNA MGP_NODShiLtJ_T0014437.1 MGP_NODShiLtJ_G0012545.1 mouse_genomes_project 4 60908356 60908965 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014383.1 MGP_NODShiLtJ_G0012491.1 mouse_genomes_project 4 42385473 42386408 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065083.1 MGP_NODShiLtJ_G0028034.1 mouse_genomes_project 4 48248710 48274877 + MGP_NODShiLtJ_P0065083 Glipr2 protein_coding protein_coding MGP_NODShiLtJ_T0065084.1 MGP_NODShiLtJ_G0028034.1 mouse_genomes_project 4 48249001 48274877 + MGP_NODShiLtJ_P0065084 Glipr2 protein_coding protein_coding MGP_NODShiLtJ_T0069047.1 MGP_NODShiLtJ_G0028956.1 mouse_genomes_project 4 167536093 167551268 - MGP_NODShiLtJ_P0069047 Car6 protein_coding protein_coding MGP_NODShiLtJ_T0069048.1 MGP_NODShiLtJ_G0028956.1 mouse_genomes_project 4 167536093 167548478 - MGP_NODShiLtJ_P0069048 Car6 protein_coding protein_coding MGP_NODShiLtJ_T0069049.1 MGP_NODShiLtJ_G0028956.1 mouse_genomes_project 4 167536290 167546131 - Car6 protein_coding processed_transcript MGP_NODShiLtJ_T0069050.1 MGP_NODShiLtJ_G0028956.1 mouse_genomes_project 4 167537359 167548211 - Car6 protein_coding processed_transcript MGP_NODShiLtJ_T0101915.1 MGP_NODShiLtJ_G0040083.1 mouse_genomes_project 4 99800046 99800591 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0067632.1 MGP_NODShiLtJ_G0028625.1 mouse_genomes_project 4 144419322 144444339 - MGP_NODShiLtJ_P0067632 Zbtb8a protein_coding protein_coding MGP_NODShiLtJ_T0065862.1 MGP_NODShiLtJ_G0028221.1 mouse_genomes_project 4 97453401 97487420 - MGP_NODShiLtJ_P0065862 Haus6 protein_coding protein_coding MGP_NODShiLtJ_T0065863.1 MGP_NODShiLtJ_G0028221.1 mouse_genomes_project 4 97460365 97487420 - Haus6 protein_coding processed_transcript MGP_NODShiLtJ_T0065864.1 MGP_NODShiLtJ_G0028221.1 mouse_genomes_project 4 97478211 97487384 - Haus6 protein_coding processed_transcript MGP_NODShiLtJ_T0065865.1 MGP_NODShiLtJ_G0028221.1 mouse_genomes_project 4 97480975 97487414 - MGP_NODShiLtJ_P0065865 Haus6 protein_coding protein_coding MGP_NODShiLtJ_T0064374.1 MGP_NODShiLtJ_G0027866.1 mouse_genomes_project 4 8809412 8870057 - MGP_NODShiLtJ_P0064374 Esrp1 protein_coding protein_coding MGP_NODShiLtJ_T0064375.1 MGP_NODShiLtJ_G0027866.1 mouse_genomes_project 4 8809412 8869953 - MGP_NODShiLtJ_P0064375 Esrp1 protein_coding protein_coding MGP_NODShiLtJ_T0064376.1 MGP_NODShiLtJ_G0027866.1 mouse_genomes_project 4 8809517 8870057 - MGP_NODShiLtJ_P0064376 Esrp1 protein_coding protein_coding MGP_NODShiLtJ_T0064377.1 MGP_NODShiLtJ_G0027866.1 mouse_genomes_project 4 8810484 8869953 - MGP_NODShiLtJ_P0064377 Esrp1 protein_coding protein_coding MGP_NODShiLtJ_T0064378.1 MGP_NODShiLtJ_G0027866.1 mouse_genomes_project 4 8810484 8848897 - MGP_NODShiLtJ_P0064378 Esrp1 protein_coding protein_coding MGP_NODShiLtJ_T0064379.1 MGP_NODShiLtJ_G0027866.1 mouse_genomes_project 4 8818053 8821599 - Esrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0064380.1 MGP_NODShiLtJ_G0027866.1 mouse_genomes_project 4 8834936 8869668 - MGP_NODShiLtJ_P0064380 Esrp1 protein_coding protein_coding MGP_NODShiLtJ_T0066882.1 MGP_NODShiLtJ_G0028446.1 mouse_genomes_project 4 130791633 130802400 + MGP_NODShiLtJ_P0066882 Hectd3 protein_coding protein_coding MGP_NODShiLtJ_T0066883.1 MGP_NODShiLtJ_G0028446.1 mouse_genomes_project 4 130795654 130797441 + Hectd3 protein_coding retained_intron MGP_NODShiLtJ_T0066884.1 MGP_NODShiLtJ_G0028446.1 mouse_genomes_project 4 130799979 130800577 + Hectd3 protein_coding retained_intron MGP_NODShiLtJ_T0100588.1 MGP_NODShiLtJ_G0038982.1 mouse_genomes_project 4 147467867 147468003 + Snora16a snoRNA snoRNA MGP_NODShiLtJ_T0007743.1 MGP_NODShiLtJ_G0006322.1 mouse_genomes_project 4 9877088 9927467 + Gm11846 lincRNA lincRNA MGP_NODShiLtJ_T0067312.1 MGP_NODShiLtJ_G0028549.1 mouse_genomes_project 4 138488797 138494961 + MGP_NODShiLtJ_P0067312 Mycbp protein_coding protein_coding MGP_NODShiLtJ_T0067313.1 MGP_NODShiLtJ_G0028549.1 mouse_genomes_project 4 138488887 138498128 + MGP_NODShiLtJ_P0067313 Mycbp protein_coding protein_coding MGP_NODShiLtJ_T0067314.1 MGP_NODShiLtJ_G0028549.1 mouse_genomes_project 4 138488924 138493612 + Mycbp protein_coding processed_transcript MGP_NODShiLtJ_T0067315.1 MGP_NODShiLtJ_G0028549.1 mouse_genomes_project 4 138489019 138495127 + Mycbp protein_coding processed_transcript MGP_NODShiLtJ_T0001391.1 MGP_NODShiLtJ_G0001311.1 mouse_genomes_project 4 147236471 147242217 - TEC TEC MGP_NODShiLtJ_T0010500.1 MGP_NODShiLtJ_G0008633.1 mouse_genomes_project 4 100046432 100046538 - Mir31 miRNA miRNA MGP_NODShiLtJ_T0014652.1 MGP_NODShiLtJ_G0012760.1 mouse_genomes_project 4 142201921 142202603 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100509.1 MGP_NODShiLtJ_G0038903.1 mouse_genomes_project 4 242451 242578 + Gm22541 snoRNA snoRNA MGP_NODShiLtJ_T0067766.1 MGP_NODShiLtJ_G0028647.1 mouse_genomes_project 4 145227483 145255960 + MGP_NODShiLtJ_P0067766 Pef1 protein_coding protein_coding MGP_NODShiLtJ_T0067767.1 MGP_NODShiLtJ_G0028647.1 mouse_genomes_project 4 145234052 145255959 + MGP_NODShiLtJ_P0067767 Pef1 protein_coding protein_coding MGP_NODShiLtJ_T0007897.1 MGP_NODShiLtJ_G0006446.1 mouse_genomes_project 4 144311458 144314518 + Gm12976 lincRNA lincRNA MGP_NODShiLtJ_T0007898.1 MGP_NODShiLtJ_G0006446.1 mouse_genomes_project 4 144313223 144314518 + Gm12976 lincRNA lincRNA MGP_NODShiLtJ_T0066453.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121707148 121721025 + MGP_NODShiLtJ_P0066453 Echdc2 protein_coding protein_coding MGP_NODShiLtJ_T0066454.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121707177 121720788 + MGP_NODShiLtJ_P0066454 Echdc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066455.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121707177 121721024 + MGP_NODShiLtJ_P0066455 Echdc2 protein_coding protein_coding MGP_NODShiLtJ_T0066456.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121707199 121721023 + MGP_NODShiLtJ_P0066456 Echdc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066457.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121707229 121720785 + MGP_NODShiLtJ_P0066457 Echdc2 protein_coding protein_coding MGP_NODShiLtJ_T0066458.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121711426 121720649 + MGP_NODShiLtJ_P0066458 Echdc2 protein_coding protein_coding MGP_NODShiLtJ_T0066459.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121711498 121717121 + Echdc2 protein_coding retained_intron MGP_NODShiLtJ_T0066460.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121711854 121721024 + Echdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0066461.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121711865 121715565 + Echdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0066462.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121713873 121720876 + MGP_NODShiLtJ_P0066462 Echdc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066463.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121714376 121718816 + Echdc2 protein_coding retained_intron MGP_NODShiLtJ_T0066464.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121715403 121720776 + Echdc2 protein_coding retained_intron MGP_NODShiLtJ_T0066465.1 MGP_NODShiLtJ_G0028356.1 mouse_genomes_project 4 121715523 121720805 + MGP_NODShiLtJ_P0066465 Echdc2 protein_coding protein_coding MGP_NODShiLtJ_T0100548.1 MGP_NODShiLtJ_G0038942.1 mouse_genomes_project 4 69389683 69389817 + Gm25391 snoRNA snoRNA MGP_NODShiLtJ_T0001379.1 MGP_NODShiLtJ_G0001299.1 mouse_genomes_project 4 45815732 45816199 - TEC TEC MGP_NODShiLtJ_T0068815.1 MGP_NODShiLtJ_G0028911.1 mouse_genomes_project 4 164920984 164933233 - MGP_NODShiLtJ_P0068815 Miip protein_coding protein_coding MGP_NODShiLtJ_T0068816.1 MGP_NODShiLtJ_G0028911.1 mouse_genomes_project 4 164920992 164933330 - MGP_NODShiLtJ_P0068816 Miip protein_coding protein_coding MGP_NODShiLtJ_T0068817.1 MGP_NODShiLtJ_G0028911.1 mouse_genomes_project 4 164920996 164922967 - Miip protein_coding retained_intron MGP_NODShiLtJ_T0068818.1 MGP_NODShiLtJ_G0028911.1 mouse_genomes_project 4 164920997 164933013 - Miip protein_coding retained_intron MGP_NODShiLtJ_T0068819.1 MGP_NODShiLtJ_G0028911.1 mouse_genomes_project 4 164920997 164932997 - MGP_NODShiLtJ_P0068819 Miip protein_coding protein_coding MGP_NODShiLtJ_T0068820.1 MGP_NODShiLtJ_G0028911.1 mouse_genomes_project 4 164923004 164933180 - Miip protein_coding retained_intron MGP_NODShiLtJ_T0068821.1 MGP_NODShiLtJ_G0028911.1 mouse_genomes_project 4 164923757 164928567 - Miip protein_coding retained_intron MGP_NODShiLtJ_T0068822.1 MGP_NODShiLtJ_G0028911.1 mouse_genomes_project 4 164929155 164933037 - Miip protein_coding retained_intron MGP_NODShiLtJ_T0064232.1 MGP_NODShiLtJ_G0027839.1 mouse_genomes_project 4 523305 527637 - MGP_NODShiLtJ_P0064232 Rps20 protein_coding protein_coding MGP_NODShiLtJ_T0064233.1 MGP_NODShiLtJ_G0027839.1 mouse_genomes_project 4 526441 527205 - Rps20 protein_coding retained_intron MGP_NODShiLtJ_T0064234.1 MGP_NODShiLtJ_G0027839.1 mouse_genomes_project 4 526444 527460 - Rps20 protein_coding retained_intron MGP_NODShiLtJ_T0007929.1 MGP_NODShiLtJ_G0006465.1 mouse_genomes_project 4 151219853 151223397 + 1700029M20Rik lincRNA lincRNA MGP_NODShiLtJ_T0007930.1 MGP_NODShiLtJ_G0006465.1 mouse_genomes_project 4 151219972 151221684 + 1700029M20Rik lincRNA lincRNA MGP_NODShiLtJ_T0007931.1 MGP_NODShiLtJ_G0006465.1 mouse_genomes_project 4 151220016 151221684 + 1700029M20Rik lincRNA lincRNA MGP_NODShiLtJ_T0007932.1 MGP_NODShiLtJ_G0006465.1 mouse_genomes_project 4 151220451 151221184 + 1700029M20Rik lincRNA lincRNA MGP_NODShiLtJ_T0067826.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146876453 146950888 - MGP_NODShiLtJ_P0067826 Ptpru protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067827.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146876457 146951020 - MGP_NODShiLtJ_P0067827 Ptpru protein_coding protein_coding MGP_NODShiLtJ_T0067828.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146876458 146876922 - Ptpru protein_coding processed_transcript MGP_NODShiLtJ_T0067829.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146877498 146950963 - MGP_NODShiLtJ_P0067829 Ptpru protein_coding protein_coding MGP_NODShiLtJ_T0067830.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146880136 146950984 - Ptpru protein_coding processed_transcript MGP_NODShiLtJ_T0067831.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146892165 146934247 - MGP_NODShiLtJ_P0067831 Ptpru protein_coding protein_coding MGP_NODShiLtJ_T0067832.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146897469 146913320 - Ptpru protein_coding processed_transcript MGP_NODShiLtJ_T0067833.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146902536 146907308 - Ptpru protein_coding retained_intron MGP_NODShiLtJ_T0067834.1 MGP_NODShiLtJ_G0028661.1 mouse_genomes_project 4 146910063 146913944 - Ptpru protein_coding retained_intron MGP_NODShiLtJ_T0010546.1 MGP_NODShiLtJ_G0008679.1 mouse_genomes_project 4 159541149 159541212 - Mir7021 miRNA miRNA MGP_NODShiLtJ_T0065629.1 MGP_NODShiLtJ_G0028171.1 mouse_genomes_project 4 69689691 69774202 + Col27a1 protein_coding retained_intron MGP_NODShiLtJ_T0065630.1 MGP_NODShiLtJ_G0028171.1 mouse_genomes_project 4 69691099 69755021 + Col27a1 protein_coding retained_intron MGP_NODShiLtJ_T0065631.1 MGP_NODShiLtJ_G0028171.1 mouse_genomes_project 4 69691122 69816451 + MGP_NODShiLtJ_P0065631 Col27a1 protein_coding protein_coding MGP_NODShiLtJ_T0065632.1 MGP_NODShiLtJ_G0028171.1 mouse_genomes_project 4 69691513 69816450 + MGP_NODShiLtJ_P0065632 Col27a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065633.1 MGP_NODShiLtJ_G0028171.1 mouse_genomes_project 4 69709971 69815173 + MGP_NODShiLtJ_P0065633 Col27a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065634.1 MGP_NODShiLtJ_G0028171.1 mouse_genomes_project 4 69762638 69815180 + MGP_NODShiLtJ_P0065634 Col27a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065635.1 MGP_NODShiLtJ_G0028171.1 mouse_genomes_project 4 69763484 69815209 + Col27a1 protein_coding retained_intron MGP_NODShiLtJ_T0065636.1 MGP_NODShiLtJ_G0028171.1 mouse_genomes_project 4 69812439 69815598 + Col27a1 protein_coding processed_transcript MGP_NODShiLtJ_T0067953.1 MGP_NODShiLtJ_G0028685.1 mouse_genomes_project 4 148069496 148087896 - MGP_NODShiLtJ_P0067953 Ppp1r8 protein_coding protein_coding MGP_NODShiLtJ_T0067954.1 MGP_NODShiLtJ_G0028685.1 mouse_genomes_project 4 148070394 148087850 - MGP_NODShiLtJ_P0067954 Ppp1r8 protein_coding protein_coding MGP_NODShiLtJ_T0067955.1 MGP_NODShiLtJ_G0028685.1 mouse_genomes_project 4 148071535 148077679 - Ppp1r8 protein_coding processed_transcript MGP_NODShiLtJ_T0067956.1 MGP_NODShiLtJ_G0028685.1 mouse_genomes_project 4 148073449 148087851 - Ppp1r8 protein_coding processed_transcript MGP_NODShiLtJ_T0067957.1 MGP_NODShiLtJ_G0028685.1 mouse_genomes_project 4 148079395 148087861 - Ppp1r8 protein_coding processed_transcript MGP_NODShiLtJ_T0004450.1 MGP_NODShiLtJ_G0003865.1 mouse_genomes_project 4 128298497 128394233 - 9130410C08Rik antisense antisense MGP_NODShiLtJ_T0014358.1 MGP_NODShiLtJ_G0012466.1 mouse_genomes_project 4 33561074 33561549 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014338.1 MGP_NODShiLtJ_G0012446.1 mouse_genomes_project 4 26203983 26204368 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064504.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21429787 21458002 + MGP_NODShiLtJ_P0064504 Pnisr protein_coding protein_coding MGP_NODShiLtJ_T0064505.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21430252 21455282 + MGP_NODShiLtJ_P0064505 Pnisr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064506.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21430259 21457994 + MGP_NODShiLtJ_P0064506 Pnisr protein_coding protein_coding MGP_NODShiLtJ_T0064507.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21430262 21442673 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0064508.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21430262 21452869 + MGP_NODShiLtJ_P0064508 Pnisr protein_coding protein_coding MGP_NODShiLtJ_T0064509.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21430268 21440195 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0064510.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21430277 21437129 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0064511.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21430285 21444328 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0064512.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21436272 21441407 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0064513.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21440930 21444248 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0064514.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21441203 21443091 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0064515.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21452560 21455391 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0064516.1 MGP_NODShiLtJ_G0027907.1 mouse_genomes_project 4 21455730 21456783 + Pnisr protein_coding processed_transcript MGP_NODShiLtJ_T0010490.1 MGP_NODShiLtJ_G0008623.1 mouse_genomes_project 4 49946522 49946590 - Gm22518 miRNA miRNA MGP_NODShiLtJ_T0007738.1 MGP_NODShiLtJ_G0006318.1 mouse_genomes_project 4 8579815 8584018 + Gm11827 lincRNA lincRNA MGP_NODShiLtJ_T0007739.1 MGP_NODShiLtJ_G0006318.1 mouse_genomes_project 4 8580951 8584018 + Gm11827 lincRNA lincRNA MGP_NODShiLtJ_T0066655.1 MGP_NODShiLtJ_G0028392.1 mouse_genomes_project 4 126423772 126516360 - MGP_NODShiLtJ_P0066655 Skint10 protein_coding protein_coding MGP_NODShiLtJ_T0066656.1 MGP_NODShiLtJ_G0028392.1 mouse_genomes_project 4 126510435 126516401 - MGP_NODShiLtJ_P0066656 Skint10 protein_coding protein_coding MGP_NODShiLtJ_T0066657.1 MGP_NODShiLtJ_G0028392.1 mouse_genomes_project 4 126511859 126516362 - Skint10 protein_coding processed_transcript MGP_NODShiLtJ_T0066250.1 MGP_NODShiLtJ_G0028317.1 mouse_genomes_project 4 118034954 118076116 + MGP_NODShiLtJ_P0066250 C8b protein_coding protein_coding MGP_NODShiLtJ_T0066251.1 MGP_NODShiLtJ_G0028317.1 mouse_genomes_project 4 118035027 118074905 + MGP_NODShiLtJ_P0066251 C8b protein_coding protein_coding MGP_NODShiLtJ_T0066252.1 MGP_NODShiLtJ_G0028317.1 mouse_genomes_project 4 118069941 118075274 + C8b protein_coding processed_transcript MGP_NODShiLtJ_T0065544.1 MGP_NODShiLtJ_G0028145.1 mouse_genomes_project 4 65762825 65917810 + MGP_NODShiLtJ_P0065544 E130308A19Rik protein_coding protein_coding MGP_NODShiLtJ_T0065545.1 MGP_NODShiLtJ_G0028145.1 mouse_genomes_project 4 65762857 65863784 + MGP_NODShiLtJ_P0065545 E130308A19Rik protein_coding protein_coding MGP_NODShiLtJ_T0065546.1 MGP_NODShiLtJ_G0028145.1 mouse_genomes_project 4 65831461 65862626 + E130308A19Rik protein_coding processed_transcript MGP_NODShiLtJ_T0014696.1 MGP_NODShiLtJ_G0012804.1 mouse_genomes_project 4 160278795 160284400 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014263.1 MGP_NODShiLtJ_G0012371.1 mouse_genomes_project 4 695060 695560 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066047.1 MGP_NODShiLtJ_G0028278.1 mouse_genomes_project 4 110519636 110762345 + MGP_NODShiLtJ_P0066047 Nfia protein_coding protein_coding MGP_NODShiLtJ_T0066048.1 MGP_NODShiLtJ_G0028278.1 mouse_genomes_project 4 110526779 110887153 + MGP_NODShiLtJ_P0066048 Nfia protein_coding protein_coding MGP_NODShiLtJ_T0066049.1 MGP_NODShiLtJ_G0028278.1 mouse_genomes_project 4 110526797 110887156 + MGP_NODShiLtJ_P0066049 Nfia protein_coding protein_coding MGP_NODShiLtJ_T0066050.1 MGP_NODShiLtJ_G0028278.1 mouse_genomes_project 4 110526974 110887153 + MGP_NODShiLtJ_P0066050 Nfia protein_coding protein_coding MGP_NODShiLtJ_T0066051.1 MGP_NODShiLtJ_G0028278.1 mouse_genomes_project 4 110526990 110887153 + MGP_NODShiLtJ_P0066051 Nfia protein_coding protein_coding MGP_NODShiLtJ_T0066052.1 MGP_NODShiLtJ_G0028278.1 mouse_genomes_project 4 110527005 110887153 + MGP_NODShiLtJ_P0066052 Nfia protein_coding protein_coding MGP_NODShiLtJ_T0066053.1 MGP_NODShiLtJ_G0028278.1 mouse_genomes_project 4 110633576 110826236 + MGP_NODShiLtJ_P0066053 Nfia protein_coding protein_coding MGP_NODShiLtJ_T0066054.1 MGP_NODShiLtJ_G0028278.1 mouse_genomes_project 4 110666488 110803759 + Nfia protein_coding processed_transcript MGP_NODShiLtJ_T0064869.1 MGP_NODShiLtJ_G0027998.1 mouse_genomes_project 4 47149209 47150040 + Dnajb5 protein_coding processed_transcript MGP_NODShiLtJ_T0064870.1 MGP_NODShiLtJ_G0027998.1 mouse_genomes_project 4 47149646 47158031 + Dnajb5 protein_coding retained_intron MGP_NODShiLtJ_T0064871.1 MGP_NODShiLtJ_G0027998.1 mouse_genomes_project 4 47149735 47152598 + Dnajb5 protein_coding processed_transcript MGP_NODShiLtJ_T0064872.1 MGP_NODShiLtJ_G0027998.1 mouse_genomes_project 4 47150057 47158037 + MGP_NODShiLtJ_P0064872 Dnajb5 protein_coding protein_coding MGP_NODShiLtJ_T0064873.1 MGP_NODShiLtJ_G0027998.1 mouse_genomes_project 4 47152389 47158022 + MGP_NODShiLtJ_P0064873 Dnajb5 protein_coding protein_coding MGP_NODShiLtJ_T0014274.1 MGP_NODShiLtJ_G0012382.1 mouse_genomes_project 4 5657475 5657807 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010492.1 MGP_NODShiLtJ_G0008625.1 mouse_genomes_project 4 62797296 62797366 - Mir32 miRNA miRNA MGP_NODShiLtJ_T0101136.1 MGP_NODShiLtJ_G0039470.1 mouse_genomes_project 4 97753696 97766620 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0099316.1 MGP_NODShiLtJ_G0037710.1 mouse_genomes_project 4 151766520 151766623 + Gm26001 snRNA snRNA MGP_NODShiLtJ_T0001382.1 MGP_NODShiLtJ_G0001302.1 mouse_genomes_project 4 52452731 52563358 - TEC TEC MGP_NODShiLtJ_T0067364.1 MGP_NODShiLtJ_G0028565.1 mouse_genomes_project 4 139712869 139736559 + MGP_NODShiLtJ_P0067364 Gnl2 protein_coding protein_coding MGP_NODShiLtJ_T0067365.1 MGP_NODShiLtJ_G0028565.1 mouse_genomes_project 4 139726795 139755481 + MGP_NODShiLtJ_P0067365 Gnl2 protein_coding protein_coding MGP_NODShiLtJ_T0067366.1 MGP_NODShiLtJ_G0028565.1 mouse_genomes_project 4 139726861 139740243 + Gnl2 protein_coding processed_transcript MGP_NODShiLtJ_T0067367.1 MGP_NODShiLtJ_G0028565.1 mouse_genomes_project 4 139739956 139741919 + Gnl2 protein_coding processed_transcript MGP_NODShiLtJ_T0067368.1 MGP_NODShiLtJ_G0028565.1 mouse_genomes_project 4 139742230 139745264 + Gnl2 protein_coding processed_transcript MGP_NODShiLtJ_T0067369.1 MGP_NODShiLtJ_G0028565.1 mouse_genomes_project 4 139753256 139755485 + Gnl2 protein_coding processed_transcript MGP_NODShiLtJ_T0067016.1 MGP_NODShiLtJ_G0028470.1 mouse_genomes_project 4 132105225 132190472 - MGP_NODShiLtJ_P0067016 Ptprf protein_coding protein_coding MGP_NODShiLtJ_T0067017.1 MGP_NODShiLtJ_G0028470.1 mouse_genomes_project 4 132106000 132114692 - Ptprf protein_coding processed_transcript MGP_NODShiLtJ_T0067018.1 MGP_NODShiLtJ_G0028470.1 mouse_genomes_project 4 132106016 132133446 - MGP_NODShiLtJ_P0067018 Ptprf protein_coding protein_coding MGP_NODShiLtJ_T0067019.1 MGP_NODShiLtJ_G0028470.1 mouse_genomes_project 4 132106021 132133017 - MGP_NODShiLtJ_P0067019 Ptprf protein_coding protein_coding MGP_NODShiLtJ_T0067020.1 MGP_NODShiLtJ_G0028470.1 mouse_genomes_project 4 132106871 132107753 - Ptprf protein_coding processed_transcript MGP_NODShiLtJ_T0067021.1 MGP_NODShiLtJ_G0028470.1 mouse_genomes_project 4 132123148 132128095 - Ptprf protein_coding processed_transcript MGP_NODShiLtJ_T0004478.1 MGP_NODShiLtJ_G0003889.1 mouse_genomes_project 4 140924981 140926738 + Gm12946 antisense antisense MGP_NODShiLtJ_T0014501.1 MGP_NODShiLtJ_G0012609.1 mouse_genomes_project 4 90721106 90721590 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014362.1 MGP_NODShiLtJ_G0012470.1 mouse_genomes_project 4 35154014 35154624 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007851.1 MGP_NODShiLtJ_G0006414.1 mouse_genomes_project 4 119910384 119917904 - Tmem61 lincRNA lincRNA MGP_NODShiLtJ_T0007852.1 MGP_NODShiLtJ_G0006414.1 mouse_genomes_project 4 119910616 119914675 - Tmem61 lincRNA lincRNA MGP_NODShiLtJ_T0065411.1 MGP_NODShiLtJ_G0028111.1 mouse_genomes_project 4 60682542 60746343 + MGP_NODShiLtJ_P0065411 protein_coding protein_coding MGP_NODShiLtJ_T0065412.1 MGP_NODShiLtJ_G0028111.1 mouse_genomes_project 4 60745436 60826913 + MGP_NODShiLtJ_P0065412 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0065413.1 MGP_NODShiLtJ_G0028111.1 mouse_genomes_project 4 60749409 60824696 + MGP_NODShiLtJ_P0065413 protein_coding protein_coding MGP_NODShiLtJ_T0065414.1 MGP_NODShiLtJ_G0028111.1 mouse_genomes_project 4 60749523 60824668 + MGP_NODShiLtJ_P0065414 protein_coding protein_coding MGP_NODShiLtJ_T0064550.1 MGP_NODShiLtJ_G0027915.1 mouse_genomes_project 4 25143544 25186899 + Gpr63 protein_coding processed_transcript MGP_NODShiLtJ_T0064551.1 MGP_NODShiLtJ_G0027915.1 mouse_genomes_project 4 25150597 25188832 + MGP_NODShiLtJ_P0064551 Gpr63 protein_coding protein_coding MGP_NODShiLtJ_T0011459.1 MGP_NODShiLtJ_G0009592.1 mouse_genomes_project 4 60415214 60415502 + Gm24628 misc_RNA misc_RNA MGP_NODShiLtJ_T0010502.1 MGP_NODShiLtJ_G0008635.1 mouse_genomes_project 4 107117912 107117993 + Mir872 miRNA miRNA MGP_NODShiLtJ_T0066747.1 MGP_NODShiLtJ_G0028421.1 mouse_genomes_project 4 129727329 129750149 - MGP_NODShiLtJ_P0066747 protein_coding protein_coding MGP_NODShiLtJ_T0066748.1 MGP_NODShiLtJ_G0028421.1 mouse_genomes_project 4 129727492 129744763 - MGP_NODShiLtJ_P0066748 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066749.1 MGP_NODShiLtJ_G0028421.1 mouse_genomes_project 4 129728394 129749653 - MGP_NODShiLtJ_P0066749 protein_coding protein_coding MGP_NODShiLtJ_T0066750.1 MGP_NODShiLtJ_G0028421.1 mouse_genomes_project 4 129736090 129743305 - protein_coding processed_transcript MGP_NODShiLtJ_T0066751.1 MGP_NODShiLtJ_G0028421.1 mouse_genomes_project 4 129740481 129744632 - protein_coding retained_intron MGP_NODShiLtJ_T0066752.1 MGP_NODShiLtJ_G0028421.1 mouse_genomes_project 4 129744732 129745669 - protein_coding processed_transcript MGP_NODShiLtJ_T0014712.1 MGP_NODShiLtJ_G0012820.1 mouse_genomes_project 4 166788352 166788771 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007759.1 MGP_NODShiLtJ_G0006337.1 mouse_genomes_project 4 32699317 32850756 + 4930556G01Rik lincRNA lincRNA MGP_NODShiLtJ_T0004425.1 MGP_NODShiLtJ_G0003848.1 mouse_genomes_project 4 111111345 111112795 + 0610025J13Rik antisense antisense MGP_NODShiLtJ_T0004426.1 MGP_NODShiLtJ_G0003848.1 mouse_genomes_project 4 111111395 111121666 + 0610025J13Rik antisense antisense MGP_NODShiLtJ_T0004427.1 MGP_NODShiLtJ_G0003848.1 mouse_genomes_project 4 111111395 111121666 + 0610025J13Rik antisense antisense MGP_NODShiLtJ_T0004540.1 MGP_NODShiLtJ_G0003936.1 mouse_genomes_project 4 166858177 166862374 - antisense antisense MGP_NODShiLtJ_T0068584.1 MGP_NODShiLtJ_G0028834.1 mouse_genomes_project 4 156976399 157004133 - MGP_NODShiLtJ_P0068584 Padi3 protein_coding protein_coding MGP_NODShiLtJ_T0068585.1 MGP_NODShiLtJ_G0028834.1 mouse_genomes_project 4 156976403 156996567 - MGP_NODShiLtJ_P0068585 Padi3 protein_coding protein_coding MGP_NODShiLtJ_T0014518.1 MGP_NODShiLtJ_G0012626.1 mouse_genomes_project 4 99071246 99071484 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014385.1 MGP_NODShiLtJ_G0012493.1 mouse_genomes_project 4 43738220 43739015 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017960.1 MGP_NODShiLtJ_G0015449.1 mouse_genomes_project 4 169991390 169996840 - Gm16334 processed_transcript processed_transcript MGP_NODShiLtJ_T0014651.1 MGP_NODShiLtJ_G0012759.1 mouse_genomes_project 4 142035389 142035599 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068902.1 MGP_NODShiLtJ_G0028932.1 mouse_genomes_project 4 165764637 165766501 + MGP_NODShiLtJ_P0068902 Masp2 protein_coding protein_coding MGP_NODShiLtJ_T0068903.1 MGP_NODShiLtJ_G0028932.1 mouse_genomes_project 4 165764647 165777584 + MGP_NODShiLtJ_P0068903 Masp2 protein_coding protein_coding MGP_NODShiLtJ_T0068904.1 MGP_NODShiLtJ_G0028932.1 mouse_genomes_project 4 165764651 165772282 + Masp2 protein_coding retained_intron MGP_NODShiLtJ_T0068905.1 MGP_NODShiLtJ_G0028932.1 mouse_genomes_project 4 165764658 165766501 + Masp2 protein_coding retained_intron MGP_NODShiLtJ_T0004409.1 MGP_NODShiLtJ_G0003840.1 mouse_genomes_project 4 93057398 93112382 + Gm11266 antisense antisense MGP_NODShiLtJ_T0017932.1 MGP_NODShiLtJ_G0015435.1 mouse_genomes_project 4 130335597 130344423 - C530005A16Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099267.1 MGP_NODShiLtJ_G0037661.1 mouse_genomes_project 4 68678234 68678341 + Gm23148 snRNA snRNA MGP_NODShiLtJ_T0066667.1 MGP_NODShiLtJ_G0028399.1 mouse_genomes_project 4 128506333 128549684 + MGP_NODShiLtJ_P0066667 Stil protein_coding protein_coding MGP_NODShiLtJ_T0066668.1 MGP_NODShiLtJ_G0028399.1 mouse_genomes_project 4 128506356 128545878 + MGP_NODShiLtJ_P0066668 Stil protein_coding protein_coding MGP_NODShiLtJ_T0066669.1 MGP_NODShiLtJ_G0028399.1 mouse_genomes_project 4 128506356 128549684 + MGP_NODShiLtJ_P0066669 Stil protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066670.1 MGP_NODShiLtJ_G0028399.1 mouse_genomes_project 4 128512926 128522464 + MGP_NODShiLtJ_P0066670 Stil protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066671.1 MGP_NODShiLtJ_G0028399.1 mouse_genomes_project 4 128516294 128528097 + Stil protein_coding processed_transcript MGP_NODShiLtJ_T0066672.1 MGP_NODShiLtJ_G0028399.1 mouse_genomes_project 4 128522398 128529660 + Stil protein_coding retained_intron MGP_NODShiLtJ_T0064747.1 MGP_NODShiLtJ_G0027963.1 mouse_genomes_project 4 44969661 44980976 + MGP_NODShiLtJ_P0064747 Spink4 protein_coding protein_coding MGP_NODShiLtJ_T0064748.1 MGP_NODShiLtJ_G0027963.1 mouse_genomes_project 4 44969663 44974653 + Spink4 protein_coding processed_transcript MGP_NODShiLtJ_T0064696.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 38379739 38555077 - MGP_NODShiLtJ_P0064696 Lingo2 protein_coding protein_coding MGP_NODShiLtJ_T0064697.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 38380498 39990576 - MGP_NODShiLtJ_P0064697 Lingo2 protein_coding protein_coding MGP_NODShiLtJ_T0064698.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 38380498 38917890 - MGP_NODShiLtJ_P0064698 Lingo2 protein_coding protein_coding MGP_NODShiLtJ_T0064699.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 38380498 38555077 - MGP_NODShiLtJ_P0064699 Lingo2 protein_coding protein_coding MGP_NODShiLtJ_T0064700.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 38380935 38798650 - MGP_NODShiLtJ_P0064700 Lingo2 protein_coding protein_coding MGP_NODShiLtJ_T0064701.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 38798647 39989839 - Lingo2 protein_coding processed_transcript MGP_NODShiLtJ_T0064702.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 39688072 39991097 - Lingo2 protein_coding processed_transcript MGP_NODShiLtJ_T0064703.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 39692070 39989820 - Lingo2 protein_coding processed_transcript MGP_NODShiLtJ_T0064704.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 39692315 39989842 - Lingo2 protein_coding processed_transcript MGP_NODShiLtJ_T0064705.1 MGP_NODShiLtJ_G0027952.1 mouse_genomes_project 4 39990452 39991100 - Lingo2 protein_coding processed_transcript MGP_NODShiLtJ_T0066131.1 MGP_NODShiLtJ_G0028294.1 mouse_genomes_project 4 113009184 113404173 + MGP_NODShiLtJ_P0066131 Ror1 protein_coding protein_coding MGP_NODShiLtJ_T0000338.1 MGP_NODShiLtJ_G0000276.1 mouse_genomes_project 4 90147029 90147195 - Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0014279.1 MGP_NODShiLtJ_G0012387.1 mouse_genomes_project 4 7763800 7771424 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099254.1 MGP_NODShiLtJ_G0037648.1 mouse_genomes_project 4 43840712 43840794 + Gm22850 snRNA snRNA MGP_NODShiLtJ_T0064627.1 MGP_NODShiLtJ_G0027935.1 mouse_genomes_project 4 35568433 35571521 - MGP_NODShiLtJ_P0064627 Pnrc1 protein_coding protein_coding MGP_NODShiLtJ_T0064628.1 MGP_NODShiLtJ_G0027935.1 mouse_genomes_project 4 35569014 35570586 - Pnrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0064629.1 MGP_NODShiLtJ_G0027935.1 mouse_genomes_project 4 35569022 35617494 - Pnrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0067221.1 MGP_NODShiLtJ_G0028524.1 mouse_genomes_project 4 135120729 135170407 - MGP_NODShiLtJ_P0067221 Smap2 protein_coding protein_coding MGP_NODShiLtJ_T0067222.1 MGP_NODShiLtJ_G0028524.1 mouse_genomes_project 4 135124289 135128108 - Smap2 protein_coding processed_transcript MGP_NODShiLtJ_T0067872.1 MGP_NODShiLtJ_G0028668.1 mouse_genomes_project 4 147325232 147352799 - MGP_NODShiLtJ_P0067872 protein_coding protein_coding MGP_NODShiLtJ_T0067873.1 MGP_NODShiLtJ_G0028668.1 mouse_genomes_project 4 147326610 147352587 - MGP_NODShiLtJ_P0067873 protein_coding protein_coding MGP_NODShiLtJ_T0065920.1 MGP_NODShiLtJ_G0028234.1 mouse_genomes_project 4 99684819 99685616 - MGP_NODShiLtJ_P0065920 Ifna12 protein_coding protein_coding MGP_NODShiLtJ_T0068211.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150889805 150926424 - MGP_NODShiLtJ_P0068211 Srrm1 protein_coding protein_coding MGP_NODShiLtJ_T0068212.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150889812 150926347 - MGP_NODShiLtJ_P0068212 Srrm1 protein_coding protein_coding MGP_NODShiLtJ_T0068213.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150890415 150926347 - MGP_NODShiLtJ_P0068213 Srrm1 protein_coding protein_coding MGP_NODShiLtJ_T0068214.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150891354 150926239 - MGP_NODShiLtJ_P0068214 Srrm1 protein_coding protein_coding MGP_NODShiLtJ_T0068215.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150891611 150896544 - MGP_NODShiLtJ_P0068215 Srrm1 protein_coding protein_coding MGP_NODShiLtJ_T0068216.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150891797 150926237 - Srrm1 protein_coding retained_intron MGP_NODShiLtJ_T0068217.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150893089 150894171 - Srrm1 protein_coding retained_intron MGP_NODShiLtJ_T0068218.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150898489 150901554 - Srrm1 protein_coding retained_intron MGP_NODShiLtJ_T0068219.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150900798 150910055 - Srrm1 protein_coding retained_intron MGP_NODShiLtJ_T0068220.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150901478 150914444 - MGP_NODShiLtJ_P0068220 Srrm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068221.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150910250 150914500 - Srrm1 protein_coding retained_intron MGP_NODShiLtJ_T0068222.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150914392 150926245 - MGP_NODShiLtJ_P0068222 Srrm1 protein_coding protein_coding MGP_NODShiLtJ_T0068223.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150915618 150926254 - Srrm1 protein_coding retained_intron MGP_NODShiLtJ_T0068224.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150916509 150919186 - MGP_NODShiLtJ_P0068224 Srrm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068225.1 MGP_NODShiLtJ_G0028745.1 mouse_genomes_project 4 150917673 150926305 - Srrm1 protein_coding processed_transcript MGP_NODShiLtJ_T0014264.1 MGP_NODShiLtJ_G0012372.1 mouse_genomes_project 4 1292721 1293237 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064921.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47287847 47398889 + Unc13b protein_coding retained_intron MGP_NODShiLtJ_T0064922.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47287863 47500025 + MGP_NODShiLtJ_P0064922 Unc13b protein_coding protein_coding MGP_NODShiLtJ_T0064923.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47287870 47404242 + Unc13b protein_coding processed_transcript MGP_NODShiLtJ_T0064924.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47287878 47401321 + Unc13b protein_coding retained_intron MGP_NODShiLtJ_T0064925.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47287967 47498782 + MGP_NODShiLtJ_P0064925 Unc13b protein_coding protein_coding MGP_NODShiLtJ_T0064926.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47287967 47498782 + MGP_NODShiLtJ_P0064926 Unc13b protein_coding protein_coding MGP_NODShiLtJ_T0064927.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47287974 47498765 + MGP_NODShiLtJ_P0064927 Unc13b protein_coding protein_coding MGP_NODShiLtJ_T0064928.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47288158 47415892 + MGP_NODShiLtJ_P0064928 Unc13b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064929.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47352629 47471379 + Unc13b protein_coding processed_transcript MGP_NODShiLtJ_T0064930.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47410725 47466145 + Unc13b protein_coding processed_transcript MGP_NODShiLtJ_T0064931.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47413338 47470697 + MGP_NODShiLtJ_P0064931 Unc13b protein_coding protein_coding MGP_NODShiLtJ_T0064932.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47443143 47500034 + MGP_NODShiLtJ_P0064932 Unc13b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064933.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47463709 47466560 + Unc13b protein_coding retained_intron MGP_NODShiLtJ_T0064934.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47467409 47480998 + Unc13b protein_coding retained_intron MGP_NODShiLtJ_T0064935.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47483760 47490858 + Unc13b protein_coding retained_intron MGP_NODShiLtJ_T0064936.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47490136 47493013 + MGP_NODShiLtJ_P0064936 Unc13b protein_coding protein_coding MGP_NODShiLtJ_T0064937.1 MGP_NODShiLtJ_G0028005.1 mouse_genomes_project 4 47491423 47496332 + Unc13b protein_coding retained_intron MGP_NODShiLtJ_T0004380.1 MGP_NODShiLtJ_G0003814.1 mouse_genomes_project 4 44264429 44266663 + antisense antisense MGP_NODShiLtJ_T0010498.1 MGP_NODShiLtJ_G0008631.1 mouse_genomes_project 4 92578059 92578169 - Gm22402 miRNA miRNA MGP_NODShiLtJ_T0004537.1 MGP_NODShiLtJ_G0003934.1 mouse_genomes_project 4 166623883 166643169 + Ube4bos1 antisense antisense MGP_NODShiLtJ_T0004538.1 MGP_NODShiLtJ_G0003934.1 mouse_genomes_project 4 166623912 166636427 + Ube4bos1 antisense antisense MGP_NODShiLtJ_T0068550.1 MGP_NODShiLtJ_G0028823.1 mouse_genomes_project 4 155604981 155654085 + MGP_NODShiLtJ_P0068550 Iffo2 protein_coding protein_coding MGP_NODShiLtJ_T0004443.1 MGP_NODShiLtJ_G0003861.1 mouse_genomes_project 4 121334405 121337354 - Lrp8os1 antisense antisense MGP_NODShiLtJ_T0004444.1 MGP_NODShiLtJ_G0003861.1 mouse_genomes_project 4 121334426 121337354 - Lrp8os1 antisense antisense MGP_NODShiLtJ_T0014676.1 MGP_NODShiLtJ_G0012784.1 mouse_genomes_project 4 151505072 151505286 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068475.1 MGP_NODShiLtJ_G0028805.1 mouse_genomes_project 4 154692441 154713774 + MGP_NODShiLtJ_P0068475 Pla2g2c protein_coding protein_coding MGP_NODShiLtJ_T0068476.1 MGP_NODShiLtJ_G0028805.1 mouse_genomes_project 4 154692974 154711336 + MGP_NODShiLtJ_P0068476 Pla2g2c protein_coding protein_coding MGP_NODShiLtJ_T0068477.1 MGP_NODShiLtJ_G0028805.1 mouse_genomes_project 4 154692974 154712217 + MGP_NODShiLtJ_P0068477 Pla2g2c protein_coding protein_coding MGP_NODShiLtJ_T0068743.1 MGP_NODShiLtJ_G0028873.1 mouse_genomes_project 4 159862714 159868433 + MGP_NODShiLtJ_P0068743 Pramel1 protein_coding protein_coding MGP_NODShiLtJ_T0067272.1 MGP_NODShiLtJ_G0028542.1 mouse_genomes_project 4 137703631 137719950 + MGP_NODShiLtJ_P0067272 Heyl protein_coding protein_coding MGP_NODShiLtJ_T0067273.1 MGP_NODShiLtJ_G0028542.1 mouse_genomes_project 4 137703928 137710740 + Heyl protein_coding processed_transcript MGP_NODShiLtJ_T0067274.1 MGP_NODShiLtJ_G0028542.1 mouse_genomes_project 4 137709837 137716066 + Heyl protein_coding processed_transcript MGP_NODShiLtJ_T0065143.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49108956 49115950 + MGP_NODShiLtJ_P0065143 Zcchc7 protein_coding protein_coding MGP_NODShiLtJ_T0065144.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49109647 49312371 + MGP_NODShiLtJ_P0065144 Zcchc7 protein_coding protein_coding MGP_NODShiLtJ_T0065145.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49109667 49289114 + Zcchc7 protein_coding retained_intron MGP_NODShiLtJ_T0065146.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49109718 49116207 + MGP_NODShiLtJ_P0065146 Zcchc7 protein_coding protein_coding MGP_NODShiLtJ_T0065147.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49109726 49287948 + MGP_NODShiLtJ_P0065147 Zcchc7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065148.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49114426 49290176 + Zcchc7 protein_coding retained_intron MGP_NODShiLtJ_T0065149.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49285491 49311530 + Zcchc7 protein_coding processed_transcript MGP_NODShiLtJ_T0065150.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49303266 49312383 + MGP_NODShiLtJ_P0065150 Zcchc7 protein_coding protein_coding MGP_NODShiLtJ_T0065151.1 MGP_NODShiLtJ_G0028041.1 mouse_genomes_project 4 49306163 49311530 + MGP_NODShiLtJ_P0065151 Zcchc7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066806.1 MGP_NODShiLtJ_G0028431.1 mouse_genomes_project 4 130246448 130281600 + MGP_NODShiLtJ_P0066806 Ipp protein_coding protein_coding MGP_NODShiLtJ_T0066807.1 MGP_NODShiLtJ_G0028431.1 mouse_genomes_project 4 130246451 130281608 + MGP_NODShiLtJ_P0066807 Ipp protein_coding protein_coding MGP_NODShiLtJ_T0065053.1 MGP_NODShiLtJ_G0028022.1 mouse_genomes_project 4 47922671 47923496 - MGP_NODShiLtJ_P0065053 Spag8 protein_coding protein_coding MGP_NODShiLtJ_T0065054.1 MGP_NODShiLtJ_G0028022.1 mouse_genomes_project 4 47922671 47924889 - MGP_NODShiLtJ_P0065054 Spag8 protein_coding protein_coding MGP_NODShiLtJ_T0065055.1 MGP_NODShiLtJ_G0028022.1 mouse_genomes_project 4 47923012 47924931 - MGP_NODShiLtJ_P0065055 Spag8 protein_coding protein_coding MGP_NODShiLtJ_T0064706.1 MGP_NODShiLtJ_G0027953.1 mouse_genomes_project 4 43384389 43385871 + MGP_NODShiLtJ_P0064706 1700009N14Rik protein_coding protein_coding MGP_NODShiLtJ_T0010556.1 MGP_NODShiLtJ_G0008689.1 mouse_genomes_project 4 174126064 174126121 - Mir7658 miRNA miRNA MGP_NODShiLtJ_T0099289.1 MGP_NODShiLtJ_G0037683.1 mouse_genomes_project 4 122102733 122102840 - Gm25827 snRNA snRNA MGP_NODShiLtJ_T0065556.1 MGP_NODShiLtJ_G0028150.1 mouse_genomes_project 4 66210584 66213242 + MGP_NODShiLtJ_P0065556 Mup20 protein_coding protein_coding MGP_NODShiLtJ_T0101905.1 MGP_NODShiLtJ_G0040073.1 mouse_genomes_project 4 54104329 54195251 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0007962.1 MGP_NODShiLtJ_G0006494.1 mouse_genomes_project 4 170295928 170298904 + Gm833 lincRNA lincRNA MGP_NODShiLtJ_T0100574.1 MGP_NODShiLtJ_G0038968.1 mouse_genomes_project 4 132066214 132066318 + Gm23382 snoRNA snoRNA MGP_NODShiLtJ_T0066085.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111791801 112008946 - MGP_NODShiLtJ_P0066085 Dock7 protein_coding protein_coding MGP_NODShiLtJ_T0066086.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111791984 111812245 - Dock7 protein_coding processed_transcript MGP_NODShiLtJ_T0066087.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111791985 112008805 - MGP_NODShiLtJ_P0066087 Dock7 protein_coding protein_coding MGP_NODShiLtJ_T0066088.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111791987 111890741 - MGP_NODShiLtJ_P0066088 Dock7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066089.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111791987 112008805 - MGP_NODShiLtJ_P0066089 Dock7 protein_coding protein_coding MGP_NODShiLtJ_T0066090.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111792388 112008805 - MGP_NODShiLtJ_P0066090 Dock7 protein_coding protein_coding MGP_NODShiLtJ_T0066091.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111804058 111805011 - Dock7 protein_coding retained_intron MGP_NODShiLtJ_T0066092.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111804061 111808192 - Dock7 protein_coding retained_intron MGP_NODShiLtJ_T0066093.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111804463 111814650 - Dock7 protein_coding processed_transcript MGP_NODShiLtJ_T0066094.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111805368 111817921 - MGP_NODShiLtJ_P0066094 Dock7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066095.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111815015 111822033 - Dock7 protein_coding retained_intron MGP_NODShiLtJ_T0066096.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111818790 111819952 - Dock7 protein_coding processed_transcript MGP_NODShiLtJ_T0066097.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111852533 111876054 - MGP_NODShiLtJ_P0066097 Dock7 protein_coding protein_coding MGP_NODShiLtJ_T0066098.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111854624 111876019 - MGP_NODShiLtJ_P0066098 Dock7 protein_coding protein_coding MGP_NODShiLtJ_T0066099.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111855855 111859048 - Dock7 protein_coding retained_intron MGP_NODShiLtJ_T0066100.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111867376 111875229 - Dock7 protein_coding processed_transcript MGP_NODShiLtJ_T0066101.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111874689 111926824 - MGP_NODShiLtJ_P0066101 Dock7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066105.1 MGP_NODShiLtJ_G0028285.1 mouse_genomes_project 4 111935230 111939962 - Dock7 protein_coding retained_intron MGP_NODShiLtJ_T0017902.1 MGP_NODShiLtJ_G0015415.1 mouse_genomes_project 4 58812850 58825301 - 4930412L05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017903.1 MGP_NODShiLtJ_G0015415.1 mouse_genomes_project 4 58822296 58825597 - 4930412L05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0068652.1 MGP_NODShiLtJ_G0028850.1 mouse_genomes_project 4 157662711 157674102 - MGP_NODShiLtJ_P0068652 Clcnkb protein_coding protein_coding MGP_NODShiLtJ_T0068653.1 MGP_NODShiLtJ_G0028850.1 mouse_genomes_project 4 157662711 157674102 - MGP_NODShiLtJ_P0068653 Clcnkb protein_coding protein_coding MGP_NODShiLtJ_T0068654.1 MGP_NODShiLtJ_G0028850.1 mouse_genomes_project 4 157662711 157663731 - MGP_NODShiLtJ_P0068654 Clcnkb protein_coding protein_coding MGP_NODShiLtJ_T0068655.1 MGP_NODShiLtJ_G0028850.1 mouse_genomes_project 4 157672383 157674049 - Clcnkb protein_coding processed_transcript MGP_NODShiLtJ_T0068061.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149393104 149427267 - MGP_NODShiLtJ_P0068061 Dhdds protein_coding protein_coding MGP_NODShiLtJ_T0068062.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149393133 149427264 - MGP_NODShiLtJ_P0068062 Dhdds protein_coding protein_coding MGP_NODShiLtJ_T0068063.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149393134 149405671 - Dhdds protein_coding processed_transcript MGP_NODShiLtJ_T0068064.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149393139 149426770 - Dhdds protein_coding processed_transcript MGP_NODShiLtJ_T0068065.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149393251 149427248 - Dhdds protein_coding processed_transcript MGP_NODShiLtJ_T0068066.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149394268 149427248 - MGP_NODShiLtJ_P0068066 Dhdds protein_coding protein_coding MGP_NODShiLtJ_T0068067.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149394996 149420764 - MGP_NODShiLtJ_P0068067 Dhdds protein_coding protein_coding MGP_NODShiLtJ_T0068068.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149395024 149426770 - MGP_NODShiLtJ_P0068068 Dhdds protein_coding protein_coding MGP_NODShiLtJ_T0068069.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149395056 149426770 - MGP_NODShiLtJ_P0068069 Dhdds protein_coding protein_coding MGP_NODShiLtJ_T0068070.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149395318 149427295 - MGP_NODShiLtJ_P0068070 Dhdds protein_coding protein_coding MGP_NODShiLtJ_T0068071.1 MGP_NODShiLtJ_G0028710.1 mouse_genomes_project 4 149405253 149423507 - Dhdds protein_coding processed_transcript MGP_NODShiLtJ_T0007769.1 MGP_NODShiLtJ_G0006347.1 mouse_genomes_project 4 50094824 50097193 + lincRNA lincRNA MGP_NODShiLtJ_T0066475.1 MGP_NODShiLtJ_G0028360.1 mouse_genomes_project 4 121929408 121945971 - MGP_NODShiLtJ_P0066475 Fam159a protein_coding protein_coding MGP_NODShiLtJ_T0068537.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155372846 155490538 + MGP_NODShiLtJ_P0068537 Ubr4 protein_coding protein_coding MGP_NODShiLtJ_T0068539.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155401462 155510890 + MGP_NODShiLtJ_P0068539 Ubr4 protein_coding protein_coding MGP_NODShiLtJ_T0068540.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155401462 155510948 + MGP_NODShiLtJ_P0068540 Ubr4 protein_coding protein_coding MGP_NODShiLtJ_T0068541.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155401472 155418382 + Ubr4 protein_coding processed_transcript MGP_NODShiLtJ_T0068542.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155435145 155472694 + MGP_NODShiLtJ_P0068542 Ubr4 protein_coding protein_coding MGP_NODShiLtJ_T0068543.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155436887 155437702 + Ubr4 protein_coding retained_intron MGP_NODShiLtJ_T0068544.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155455681 155458814 + MGP_NODShiLtJ_P0068544 Ubr4 protein_coding protein_coding MGP_NODShiLtJ_T0068545.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155484033 155484750 + Ubr4 protein_coding retained_intron MGP_NODShiLtJ_T0068546.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155497827 155501579 + Ubr4 protein_coding retained_intron MGP_NODShiLtJ_T0068547.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155499712 155503369 + Ubr4 protein_coding processed_transcript MGP_NODShiLtJ_T0068548.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155499895 155501822 + Ubr4 protein_coding retained_intron MGP_NODShiLtJ_T0068549.1 MGP_NODShiLtJ_G0028822.1 mouse_genomes_project 4 155501148 155503451 + Ubr4 protein_coding retained_intron MGP_NODShiLtJ_T0014525.1 MGP_NODShiLtJ_G0012633.1 mouse_genomes_project 4 102000237 102000861 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099264.1 MGP_NODShiLtJ_G0037658.1 mouse_genomes_project 4 54289379 54289483 + Gm26424 snRNA snRNA MGP_NODShiLtJ_T0014420.1 MGP_NODShiLtJ_G0012528.1 mouse_genomes_project 4 57310073 57311312 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014270.1 MGP_NODShiLtJ_G0012378.1 mouse_genomes_project 4 3492052 3492496 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065422.1 MGP_NODShiLtJ_G0028114.1 mouse_genomes_project 4 62630046 62631485 - MGP_NODShiLtJ_P0065422 Actl7b protein_coding protein_coding MGP_NODShiLtJ_T0014628.1 MGP_NODShiLtJ_G0012736.1 mouse_genomes_project 4 135566623 135566948 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069005.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166958990 167015266 - MGP_NODShiLtJ_P0069005 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069006.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166958990 167015256 - MGP_NODShiLtJ_P0069006 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069007.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166958992 166986742 - MGP_NODShiLtJ_P0069007 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069008.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166958992 167018143 - MGP_NODShiLtJ_P0069008 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069009.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166958993 166988592 - MGP_NODShiLtJ_P0069009 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069010.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166959639 167015163 - MGP_NODShiLtJ_P0069010 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069011.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166960462 166972936 - MGP_NODShiLtJ_P0069011 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069012.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166969555 166987734 - MGP_NODShiLtJ_P0069012 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069013.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166969634 166988173 - MGP_NODShiLtJ_P0069013 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069014.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166969796 167015162 - MGP_NODShiLtJ_P0069014 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069015.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166969961 167015110 - MGP_NODShiLtJ_P0069015 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069016.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166972804 167019127 - MGP_NODShiLtJ_P0069016 Pik3cd protein_coding protein_coding MGP_NODShiLtJ_T0069017.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166985986 166988641 - Pik3cd protein_coding processed_transcript MGP_NODShiLtJ_T0069018.1 MGP_NODShiLtJ_G0028948.1 mouse_genomes_project 4 166986312 167018143 - Pik3cd protein_coding processed_transcript MGP_NODShiLtJ_T0100559.1 MGP_NODShiLtJ_G0038953.1 mouse_genomes_project 4 93683067 93683186 + Gm24884 snoRNA snoRNA MGP_NODShiLtJ_T0065253.1 MGP_NODShiLtJ_G0028066.1 mouse_genomes_project 4 51017465 51032197 + MGP_NODShiLtJ_P0065253 Nans protein_coding protein_coding MGP_NODShiLtJ_T0065254.1 MGP_NODShiLtJ_G0028066.1 mouse_genomes_project 4 51017536 51023354 + Nans protein_coding processed_transcript MGP_NODShiLtJ_T0065255.1 MGP_NODShiLtJ_G0028066.1 mouse_genomes_project 4 51017591 51027300 + Nans protein_coding processed_transcript MGP_NODShiLtJ_T0065256.1 MGP_NODShiLtJ_G0028066.1 mouse_genomes_project 4 51018202 51028963 + Nans protein_coding processed_transcript MGP_NODShiLtJ_T0064721.1 MGP_NODShiLtJ_G0027956.1 mouse_genomes_project 4 44254454 44264711 - MGP_NODShiLtJ_P0064721 Topors protein_coding protein_coding MGP_NODShiLtJ_T0007853.1 MGP_NODShiLtJ_G0006415.1 mouse_genomes_project 4 120280977 120287066 - Gm12746 lincRNA lincRNA MGP_NODShiLtJ_T0007963.1 MGP_NODShiLtJ_G0006495.1 mouse_genomes_project 4 170790926 170792355 - Gm13173 lincRNA lincRNA MGP_NODShiLtJ_T0066661.1 MGP_NODShiLtJ_G0028396.1 mouse_genomes_project 4 128397651 128400231 - MGP_NODShiLtJ_P0066661 Foxd2 protein_coding protein_coding MGP_NODShiLtJ_T0065289.1 MGP_NODShiLtJ_G0028074.1 mouse_genomes_project 4 51956952 52017803 + MGP_NODShiLtJ_P0065289 Tgfbr1 protein_coding protein_coding MGP_NODShiLtJ_T0065290.1 MGP_NODShiLtJ_G0028074.1 mouse_genomes_project 4 51956957 52020600 + MGP_NODShiLtJ_P0065290 Tgfbr1 protein_coding protein_coding MGP_NODShiLtJ_T0065291.1 MGP_NODShiLtJ_G0028074.1 mouse_genomes_project 4 51957243 51964959 + Tgfbr1 protein_coding processed_transcript MGP_NODShiLtJ_T0065292.1 MGP_NODShiLtJ_G0028074.1 mouse_genomes_project 4 51991187 52016705 + MGP_NODShiLtJ_P0065292 Tgfbr1 protein_coding protein_coding MGP_NODShiLtJ_T0066400.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121307937 121381729 + MGP_NODShiLtJ_P0066400 Lrp8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066401.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121307953 121380378 + MGP_NODShiLtJ_P0066401 Lrp8 protein_coding protein_coding MGP_NODShiLtJ_T0066402.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121307990 121381461 + MGP_NODShiLtJ_P0066402 Lrp8 protein_coding protein_coding MGP_NODShiLtJ_T0066403.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121308089 121380378 + MGP_NODShiLtJ_P0066403 Lrp8 protein_coding protein_coding MGP_NODShiLtJ_T0066404.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121308089 121379932 + MGP_NODShiLtJ_P0066404 Lrp8 protein_coding protein_coding MGP_NODShiLtJ_T0066405.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121308517 121357838 + Lrp8 protein_coding processed_transcript MGP_NODShiLtJ_T0066406.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121308926 121380378 + Lrp8 protein_coding processed_transcript MGP_NODShiLtJ_T0066407.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121329672 121380378 + Lrp8 protein_coding processed_transcript MGP_NODShiLtJ_T0066408.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121337474 121343725 + Lrp8 protein_coding retained_intron MGP_NODShiLtJ_T0066409.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121337494 121384402 + MGP_NODShiLtJ_P0066409 Lrp8 protein_coding protein_coding MGP_NODShiLtJ_T0066410.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121352676 121354771 + Lrp8 protein_coding retained_intron MGP_NODShiLtJ_T0066411.1 MGP_NODShiLtJ_G0028349.1 mouse_genomes_project 4 121356603 121363338 + Lrp8 protein_coding processed_transcript MGP_NODShiLtJ_T0067029.1 MGP_NODShiLtJ_G0028472.1 mouse_genomes_project 4 132318315 132324724 + MGP_NODShiLtJ_P0067029 Med8 protein_coding protein_coding MGP_NODShiLtJ_T0067030.1 MGP_NODShiLtJ_G0028472.1 mouse_genomes_project 4 132318333 132324055 + MGP_NODShiLtJ_P0067030 Med8 protein_coding protein_coding MGP_NODShiLtJ_T0067031.1 MGP_NODShiLtJ_G0028472.1 mouse_genomes_project 4 132318334 132322812 + Med8 protein_coding processed_transcript MGP_NODShiLtJ_T0067032.1 MGP_NODShiLtJ_G0028472.1 mouse_genomes_project 4 132318359 132324058 + MGP_NODShiLtJ_P0067032 Med8 protein_coding protein_coding MGP_NODShiLtJ_T0067033.1 MGP_NODShiLtJ_G0028472.1 mouse_genomes_project 4 132319326 132320775 + Med8 protein_coding processed_transcript MGP_NODShiLtJ_T0067034.1 MGP_NODShiLtJ_G0028472.1 mouse_genomes_project 4 132320415 132321496 + Med8 protein_coding processed_transcript MGP_NODShiLtJ_T0067035.1 MGP_NODShiLtJ_G0028472.1 mouse_genomes_project 4 132320606 132323022 + Med8 protein_coding processed_transcript MGP_NODShiLtJ_T0100584.1 MGP_NODShiLtJ_G0038978.1 mouse_genomes_project 4 145815164 145815247 + Gm23711 snoRNA snoRNA MGP_NODShiLtJ_T0014330.1 MGP_NODShiLtJ_G0012438.1 mouse_genomes_project 4 23562060 23562477 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067527.1 MGP_NODShiLtJ_G0028603.1 mouse_genomes_project 4 142264232 142267605 - MGP_NODShiLtJ_P0067527 Gjb5 protein_coding protein_coding MGP_NODShiLtJ_T0068742.1 MGP_NODShiLtJ_G0028872.1 mouse_genomes_project 4 159805828 159832135 + MGP_NODShiLtJ_P0068742 Lrrc38 protein_coding protein_coding MGP_NODShiLtJ_T0007840.1 MGP_NODShiLtJ_G0006406.1 mouse_genomes_project 4 114343887 114353575 - E130102H24Rik lincRNA lincRNA MGP_NODShiLtJ_T0007842.1 MGP_NODShiLtJ_G0006406.1 mouse_genomes_project 4 114353368 114354062 - E130102H24Rik lincRNA lincRNA MGP_NODShiLtJ_T0067562.1 MGP_NODShiLtJ_G0028612.1 mouse_genomes_project 4 143900865 143920702 + MGP_NODShiLtJ_P0067562 Trim62 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067563.1 MGP_NODShiLtJ_G0028612.1 mouse_genomes_project 4 143900873 143929587 + MGP_NODShiLtJ_P0067563 Trim62 protein_coding protein_coding MGP_NODShiLtJ_T0069073.1 MGP_NODShiLtJ_G0028960.1 mouse_genomes_project 4 168311276 168335896 + MGP_NODShiLtJ_P0069073 Errfi1 protein_coding protein_coding MGP_NODShiLtJ_T0069074.1 MGP_NODShiLtJ_G0028960.1 mouse_genomes_project 4 168312418 168313161 + Errfi1 protein_coding processed_transcript MGP_NODShiLtJ_T0069075.1 MGP_NODShiLtJ_G0028960.1 mouse_genomes_project 4 168312418 168335891 + MGP_NODShiLtJ_P0069075 Errfi1 protein_coding protein_coding MGP_NODShiLtJ_T0069102.1 MGP_NODShiLtJ_G0028966.1 mouse_genomes_project 4 168529406 168540939 - MGP_NODShiLtJ_P0069102 Vamp3 protein_coding protein_coding MGP_NODShiLtJ_T0069103.1 MGP_NODShiLtJ_G0028966.1 mouse_genomes_project 4 168538898 168540949 - Vamp3 protein_coding retained_intron MGP_NODShiLtJ_T0064672.1 MGP_NODShiLtJ_G0027945.1 mouse_genomes_project 4 37288513 37299056 - MGP_NODShiLtJ_P0064672 Smim8 protein_coding protein_coding MGP_NODShiLtJ_T0064673.1 MGP_NODShiLtJ_G0027945.1 mouse_genomes_project 4 37288513 37299071 - MGP_NODShiLtJ_P0064673 Smim8 protein_coding protein_coding MGP_NODShiLtJ_T0064674.1 MGP_NODShiLtJ_G0027945.1 mouse_genomes_project 4 37288513 37299044 - MGP_NODShiLtJ_P0064674 Smim8 protein_coding protein_coding MGP_NODShiLtJ_T0064675.1 MGP_NODShiLtJ_G0027945.1 mouse_genomes_project 4 37288513 37299178 - MGP_NODShiLtJ_P0064675 Smim8 protein_coding protein_coding MGP_NODShiLtJ_T0064676.1 MGP_NODShiLtJ_G0027945.1 mouse_genomes_project 4 37288513 37298977 - MGP_NODShiLtJ_P0064676 Smim8 protein_coding protein_coding MGP_NODShiLtJ_T0064677.1 MGP_NODShiLtJ_G0027945.1 mouse_genomes_project 4 37288524 37299038 - Smim8 protein_coding processed_transcript MGP_NODShiLtJ_T0064678.1 MGP_NODShiLtJ_G0027945.1 mouse_genomes_project 4 37290737 37299062 - Smim8 protein_coding retained_intron MGP_NODShiLtJ_T0064679.1 MGP_NODShiLtJ_G0027945.1 mouse_genomes_project 4 37291095 37298925 - Smim8 protein_coding processed_transcript MGP_NODShiLtJ_T0068559.1 MGP_NODShiLtJ_G0028828.1 mouse_genomes_project 4 156033323 156041392 - MGP_NODShiLtJ_P0068559 Klhdc7a protein_coding protein_coding MGP_NODShiLtJ_T0004491.1 MGP_NODShiLtJ_G0003899.1 mouse_genomes_project 4 148802942 148806118 - Gm13257 antisense antisense MGP_NODShiLtJ_T0014520.1 MGP_NODShiLtJ_G0012628.1 mouse_genomes_project 4 100336846 100337339 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014388.1 MGP_NODShiLtJ_G0012496.1 mouse_genomes_project 4 43870502 43871457 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007782.1 MGP_NODShiLtJ_G0006356.1 mouse_genomes_project 4 60361919 60362394 - Gm29067 lincRNA lincRNA MGP_NODShiLtJ_T0068334.1 MGP_NODShiLtJ_G0028772.1 mouse_genomes_project 4 152127724 152212426 + MGP_NODShiLtJ_P0068334 Luzp1 protein_coding protein_coding MGP_NODShiLtJ_T0068335.1 MGP_NODShiLtJ_G0028772.1 mouse_genomes_project 4 152127724 152212422 + MGP_NODShiLtJ_P0068335 Luzp1 protein_coding protein_coding MGP_NODShiLtJ_T0068336.1 MGP_NODShiLtJ_G0028772.1 mouse_genomes_project 4 152127767 152181098 + Luzp1 protein_coding retained_intron MGP_NODShiLtJ_T0068337.1 MGP_NODShiLtJ_G0028772.1 mouse_genomes_project 4 152127814 152203781 + MGP_NODShiLtJ_P0068337 Luzp1 protein_coding protein_coding MGP_NODShiLtJ_T0068338.1 MGP_NODShiLtJ_G0028772.1 mouse_genomes_project 4 152180781 152209505 + MGP_NODShiLtJ_P0068338 Luzp1 protein_coding protein_coding MGP_NODShiLtJ_T0068339.1 MGP_NODShiLtJ_G0028772.1 mouse_genomes_project 4 152203467 152212425 + MGP_NODShiLtJ_P0068339 Luzp1 protein_coding protein_coding MGP_NODShiLtJ_T0068340.1 MGP_NODShiLtJ_G0028772.1 mouse_genomes_project 4 152208375 152217892 + MGP_NODShiLtJ_P0068340 Luzp1 protein_coding protein_coding MGP_NODShiLtJ_T0007918.1 MGP_NODShiLtJ_G0006460.1 mouse_genomes_project 4 147467080 147469449 + Snhg12 lincRNA lincRNA MGP_NODShiLtJ_T0007919.1 MGP_NODShiLtJ_G0006460.1 mouse_genomes_project 4 147467080 147469447 + Snhg12 lincRNA lincRNA MGP_NODShiLtJ_T0007920.1 MGP_NODShiLtJ_G0006460.1 mouse_genomes_project 4 147467080 147468374 + Snhg12 lincRNA lincRNA MGP_NODShiLtJ_T0007921.1 MGP_NODShiLtJ_G0006460.1 mouse_genomes_project 4 147467095 147469173 + Snhg12 lincRNA lincRNA MGP_NODShiLtJ_T0007922.1 MGP_NODShiLtJ_G0006460.1 mouse_genomes_project 4 147468031 147469449 + Snhg12 lincRNA lincRNA MGP_NODShiLtJ_T0007923.1 MGP_NODShiLtJ_G0006460.1 mouse_genomes_project 4 147468220 147469420 + Snhg12 lincRNA lincRNA MGP_NODShiLtJ_T0007924.1 MGP_NODShiLtJ_G0006460.1 mouse_genomes_project 4 147468589 147469449 + Snhg12 lincRNA lincRNA MGP_NODShiLtJ_T0068456.1 MGP_NODShiLtJ_G0028797.1 mouse_genomes_project 4 154217462 154225285 + MGP_NODShiLtJ_P0068456 Ddost protein_coding protein_coding MGP_NODShiLtJ_T0065470.1 MGP_NODShiLtJ_G0028126.1 mouse_genomes_project 4 63674408 63822699 + protein_coding processed_transcript MGP_NODShiLtJ_T0065471.1 MGP_NODShiLtJ_G0028126.1 mouse_genomes_project 4 63711812 63865090 + MGP_NODShiLtJ_P0065471 protein_coding protein_coding MGP_NODShiLtJ_T0065472.1 MGP_NODShiLtJ_G0028126.1 mouse_genomes_project 4 63741787 63820979 + MGP_NODShiLtJ_P0065472 protein_coding protein_coding MGP_NODShiLtJ_T0065473.1 MGP_NODShiLtJ_G0028126.1 mouse_genomes_project 4 63790004 63820826 + MGP_NODShiLtJ_P0065473 protein_coding protein_coding MGP_NODShiLtJ_T0014351.1 MGP_NODShiLtJ_G0012459.1 mouse_genomes_project 4 30044358 30044622 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067851.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041446 147055386 - MGP_NODShiLtJ_P0067851 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067852.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147055423 - Epb41 protein_coding processed_transcript MGP_NODShiLtJ_T0067853.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147203288 - Epb41 protein_coding processed_transcript MGP_NODShiLtJ_T0067854.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147124315 - MGP_NODShiLtJ_P0067854 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067855.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147086790 - MGP_NODShiLtJ_P0067855 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067856.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147203259 - MGP_NODShiLtJ_P0067856 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067857.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147127959 - MGP_NODShiLtJ_P0067857 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067858.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147203259 - MGP_NODShiLtJ_P0067858 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067859.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147127958 - MGP_NODShiLtJ_P0067859 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067860.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041448 147086821 - MGP_NODShiLtJ_P0067860 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067861.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041464 147198344 - MGP_NODShiLtJ_P0067861 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067862.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041464 147172046 - MGP_NODShiLtJ_P0067862 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067863.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147041464 147172046 - MGP_NODShiLtJ_P0067863 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067864.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147042164 147198344 - Epb41 protein_coding processed_transcript MGP_NODShiLtJ_T0067865.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147044545 147127952 - MGP_NODShiLtJ_P0067865 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067866.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147073984 147131132 - MGP_NODShiLtJ_P0067866 Epb41 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067867.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147076566 147172059 - MGP_NODShiLtJ_P0067867 Epb41 protein_coding protein_coding MGP_NODShiLtJ_T0067868.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147109312 147120825 - Epb41 protein_coding processed_transcript MGP_NODShiLtJ_T0067869.1 MGP_NODShiLtJ_G0028665.1 mouse_genomes_project 4 147124296 147203231 - Epb41 protein_coding processed_transcript MGP_NODShiLtJ_T0099275.1 MGP_NODShiLtJ_G0037669.1 mouse_genomes_project 4 97381420 97381494 + Gm26017 snRNA snRNA MGP_NODShiLtJ_T0064680.1 MGP_NODShiLtJ_G0027946.1 mouse_genomes_project 4 37324622 37409140 - MGP_NODShiLtJ_P0064680 Zfp292 protein_coding protein_coding MGP_NODShiLtJ_T0064681.1 MGP_NODShiLtJ_G0027946.1 mouse_genomes_project 4 37324622 37409110 - MGP_NODShiLtJ_P0064681 Zfp292 protein_coding protein_coding MGP_NODShiLtJ_T0014538.1 MGP_NODShiLtJ_G0012646.1 mouse_genomes_project 4 107514275 107514720 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064795.1 MGP_NODShiLtJ_G0027975.1 mouse_genomes_project 4 45568847 45586180 + MGP_NODShiLtJ_P0064795 Nudt2 protein_coding protein_coding MGP_NODShiLtJ_T0068717.1 MGP_NODShiLtJ_G0028866.1 mouse_genomes_project 4 158150841 158167613 - MGP_NODShiLtJ_P0068717 Efhd2 protein_coding protein_coding MGP_NODShiLtJ_T0004550.1 MGP_NODShiLtJ_G0003945.1 mouse_genomes_project 4 172339432 172346814 + Gm13133 antisense antisense MGP_NODShiLtJ_T0064392.1 MGP_NODShiLtJ_G0027870.1 mouse_genomes_project 4 9224846 9238911 + MGP_NODShiLtJ_P0064392 Gem protein_coding protein_coding MGP_NODShiLtJ_T0064393.1 MGP_NODShiLtJ_G0027870.1 mouse_genomes_project 4 9226197 9238911 + MGP_NODShiLtJ_P0064393 Gem protein_coding protein_coding MGP_NODShiLtJ_T0010508.1 MGP_NODShiLtJ_G0008641.1 mouse_genomes_project 4 122659470 122659546 + Mir761 miRNA miRNA MGP_NODShiLtJ_T0014512.1 MGP_NODShiLtJ_G0012620.1 mouse_genomes_project 4 95669490 95670105 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014660.1 MGP_NODShiLtJ_G0012768.1 mouse_genomes_project 4 147360236 147360628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067627.1 MGP_NODShiLtJ_G0028624.1 mouse_genomes_project 4 144398228 144420109 + MGP_NODShiLtJ_P0067627 Zbtb8os protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067628.1 MGP_NODShiLtJ_G0028624.1 mouse_genomes_project 4 144398228 144414185 + MGP_NODShiLtJ_P0067628 Zbtb8os protein_coding protein_coding MGP_NODShiLtJ_T0067629.1 MGP_NODShiLtJ_G0028624.1 mouse_genomes_project 4 144398545 144411059 + MGP_NODShiLtJ_P0067629 Zbtb8os protein_coding protein_coding MGP_NODShiLtJ_T0067630.1 MGP_NODShiLtJ_G0028624.1 mouse_genomes_project 4 144398580 144411157 + MGP_NODShiLtJ_P0067630 Zbtb8os protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067631.1 MGP_NODShiLtJ_G0028624.1 mouse_genomes_project 4 144407571 144411054 + Zbtb8os protein_coding retained_intron MGP_NODShiLtJ_T0014625.1 MGP_NODShiLtJ_G0012733.1 mouse_genomes_project 4 135410133 135410506 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066206.1 MGP_NODShiLtJ_G0028310.1 mouse_genomes_project 4 116179689 116182762 - MGP_NODShiLtJ_P0066206 Insl5 protein_coding protein_coding MGP_NODShiLtJ_T0066207.1 MGP_NODShiLtJ_G0028310.1 mouse_genomes_project 4 116179931 116182867 - MGP_NODShiLtJ_P0066207 Insl5 protein_coding protein_coding MGP_NODShiLtJ_T0068447.1 MGP_NODShiLtJ_G0028795.1 mouse_genomes_project 4 154148436 154160596 + MGP_NODShiLtJ_P0068447 Sh2d5 protein_coding protein_coding MGP_NODShiLtJ_T0068448.1 MGP_NODShiLtJ_G0028795.1 mouse_genomes_project 4 154149648 154156543 + MGP_NODShiLtJ_P0068448 Sh2d5 protein_coding protein_coding MGP_NODShiLtJ_T0068449.1 MGP_NODShiLtJ_G0028795.1 mouse_genomes_project 4 154149658 154154954 + Sh2d5 protein_coding processed_transcript MGP_NODShiLtJ_T0068451.1 MGP_NODShiLtJ_G0028795.1 mouse_genomes_project 4 154149699 154160596 + MGP_NODShiLtJ_P0068451 Sh2d5 protein_coding protein_coding MGP_NODShiLtJ_T0068452.1 MGP_NODShiLtJ_G0028795.1 mouse_genomes_project 4 154155998 154158375 + Sh2d5 protein_coding retained_intron MGP_NODShiLtJ_T0010499.1 MGP_NODShiLtJ_G0008632.1 mouse_genomes_project 4 99155194 99155280 + Mir491 miRNA miRNA MGP_NODShiLtJ_T0004511.1 MGP_NODShiLtJ_G0003916.1 mouse_genomes_project 4 157493385 157507452 - antisense antisense MGP_NODShiLtJ_T0099265.1 MGP_NODShiLtJ_G0037659.1 mouse_genomes_project 4 57218281 57218446 - Gm22042 snRNA snRNA MGP_NODShiLtJ_T0067835.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146957108 146982930 + MGP_NODShiLtJ_P0067835 Mecr protein_coding protein_coding MGP_NODShiLtJ_T0067836.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146957131 146976017 + MGP_NODShiLtJ_P0067836 Mecr protein_coding protein_coding MGP_NODShiLtJ_T0067837.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146957143 146957646 + Mecr protein_coding processed_transcript MGP_NODShiLtJ_T0067838.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146968841 146976152 + Mecr protein_coding processed_transcript MGP_NODShiLtJ_T0067839.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146968900 146973325 + Mecr protein_coding processed_transcript MGP_NODShiLtJ_T0067840.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146972890 146980476 + Mecr protein_coding processed_transcript MGP_NODShiLtJ_T0067841.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146972916 146982930 + Mecr protein_coding processed_transcript MGP_NODShiLtJ_T0067842.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146975386 146980218 + Mecr protein_coding processed_transcript MGP_NODShiLtJ_T0067843.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146976863 146982745 + Mecr protein_coding processed_transcript MGP_NODShiLtJ_T0067844.1 MGP_NODShiLtJ_G0028662.1 mouse_genomes_project 4 146979921 146982920 + Mecr protein_coding processed_transcript MGP_NODShiLtJ_T0014646.1 MGP_NODShiLtJ_G0012754.1 mouse_genomes_project 4 141407113 141407414 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014474.1 MGP_NODShiLtJ_G0012582.1 mouse_genomes_project 4 80989143 80989741 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066711.1 MGP_NODShiLtJ_G0028414.1 mouse_genomes_project 4 129462664 129475862 + MGP_NODShiLtJ_P0066711 Atpaf1 protein_coding protein_coding MGP_NODShiLtJ_T0066712.1 MGP_NODShiLtJ_G0028414.1 mouse_genomes_project 4 129462832 129492185 + MGP_NODShiLtJ_P0066712 Atpaf1 protein_coding protein_coding MGP_NODShiLtJ_T0066713.1 MGP_NODShiLtJ_G0028414.1 mouse_genomes_project 4 129463065 129492178 + MGP_NODShiLtJ_P0066713 Atpaf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066715.1 MGP_NODShiLtJ_G0028414.1 mouse_genomes_project 4 129478240 129496611 + MGP_NODShiLtJ_P0066715 Atpaf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004529.1 MGP_NODShiLtJ_G0003928.1 mouse_genomes_project 4 165744867 165746150 - Gm13209 antisense antisense MGP_NODShiLtJ_T0014391.1 MGP_NODShiLtJ_G0012499.1 mouse_genomes_project 4 44698711 44699158 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014687.1 MGP_NODShiLtJ_G0012795.1 mouse_genomes_project 4 155363306 155364187 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014582.1 MGP_NODShiLtJ_G0012690.1 mouse_genomes_project 4 122331962 122332518 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067406.1 MGP_NODShiLtJ_G0028576.1 mouse_genomes_project 4 140926746 140928878 + MGP_NODShiLtJ_P0067406 Eva1b protein_coding protein_coding MGP_NODShiLtJ_T0067407.1 MGP_NODShiLtJ_G0028576.1 mouse_genomes_project 4 140927005 140928879 + MGP_NODShiLtJ_P0067407 Eva1b protein_coding protein_coding MGP_NODShiLtJ_T0067408.1 MGP_NODShiLtJ_G0028576.1 mouse_genomes_project 4 140927534 140928869 + MGP_NODShiLtJ_P0067408 Eva1b protein_coding protein_coding MGP_NODShiLtJ_T0004504.1 MGP_NODShiLtJ_G0003909.1 mouse_genomes_project 4 154027611 154028535 - 1700095J12Rik antisense antisense MGP_NODShiLtJ_T0004547.1 MGP_NODShiLtJ_G0003942.1 mouse_genomes_project 4 169983907 169984370 + Gm16333 antisense antisense MGP_NODShiLtJ_T0014435.1 MGP_NODShiLtJ_G0012543.1 mouse_genomes_project 4 60580076 60581663 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065921.1 MGP_NODShiLtJ_G0028235.1 mouse_genomes_project 4 99720031 99726950 - MGP_NODShiLtJ_P0065921 C87499 protein_coding protein_coding MGP_NODShiLtJ_T0065922.1 MGP_NODShiLtJ_G0028235.1 mouse_genomes_project 4 99720031 99726902 - MGP_NODShiLtJ_P0065922 C87499 protein_coding protein_coding MGP_NODShiLtJ_T0065923.1 MGP_NODShiLtJ_G0028235.1 mouse_genomes_project 4 99720880 99727102 - MGP_NODShiLtJ_P0065923 C87499 protein_coding protein_coding MGP_NODShiLtJ_T0065924.1 MGP_NODShiLtJ_G0028235.1 mouse_genomes_project 4 99721609 99726833 - MGP_NODShiLtJ_P0065924 C87499 protein_coding protein_coding MGP_NODShiLtJ_T0065925.1 MGP_NODShiLtJ_G0028235.1 mouse_genomes_project 4 99721899 99726882 - MGP_NODShiLtJ_P0065925 C87499 protein_coding protein_coding MGP_NODShiLtJ_T0064282.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3365920 3427272 - Nsmaf protein_coding retained_intron MGP_NODShiLtJ_T0064283.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3365920 3427272 - MGP_NODShiLtJ_P0064283 Nsmaf protein_coding protein_coding MGP_NODShiLtJ_T0064284.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3366124 3369688 - Nsmaf protein_coding retained_intron MGP_NODShiLtJ_T0064285.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3366482 3427097 - Nsmaf protein_coding processed_transcript MGP_NODShiLtJ_T0064286.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3377430 3427256 - Nsmaf protein_coding processed_transcript MGP_NODShiLtJ_T0064287.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3380049 3394919 - Nsmaf protein_coding retained_intron MGP_NODShiLtJ_T0064288.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3395500 3403441 - Nsmaf protein_coding retained_intron MGP_NODShiLtJ_T0064289.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3399380 3426580 - Nsmaf protein_coding processed_transcript MGP_NODShiLtJ_T0064290.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3400659 3419082 - Nsmaf protein_coding processed_transcript MGP_NODShiLtJ_T0064291.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3404014 3427098 - MGP_NODShiLtJ_P0064291 Nsmaf protein_coding protein_coding MGP_NODShiLtJ_T0064292.1 MGP_NODShiLtJ_G0027851.1 mouse_genomes_project 4 3408655 3417148 - Nsmaf protein_coding processed_transcript MGP_NODShiLtJ_T0014718.1 MGP_NODShiLtJ_G0012826.1 mouse_genomes_project 4 170272568 170272824 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067946.1 MGP_NODShiLtJ_G0028683.1 mouse_genomes_project 4 147996990 148006311 + Rpa2 protein_coding processed_transcript MGP_NODShiLtJ_T0067947.1 MGP_NODShiLtJ_G0028683.1 mouse_genomes_project 4 147996993 148008345 + MGP_NODShiLtJ_P0067947 Rpa2 protein_coding protein_coding MGP_NODShiLtJ_T0067948.1 MGP_NODShiLtJ_G0028683.1 mouse_genomes_project 4 147997034 148003836 + Rpa2 protein_coding retained_intron MGP_NODShiLtJ_T0067949.1 MGP_NODShiLtJ_G0028683.1 mouse_genomes_project 4 147997293 148001723 + Rpa2 protein_coding retained_intron MGP_NODShiLtJ_T0067950.1 MGP_NODShiLtJ_G0028683.1 mouse_genomes_project 4 147999059 148001911 + Rpa2 protein_coding retained_intron MGP_NODShiLtJ_T0067951.1 MGP_NODShiLtJ_G0028683.1 mouse_genomes_project 4 148004728 148006755 + MGP_NODShiLtJ_P0067951 Rpa2 protein_coding protein_coding MGP_NODShiLtJ_T0068699.1 MGP_NODShiLtJ_G0028860.1 mouse_genomes_project 4 157965667 157967416 - MGP_NODShiLtJ_P0068699 Ddi2 protein_coding protein_coding MGP_NODShiLtJ_T0014715.1 MGP_NODShiLtJ_G0012823.1 mouse_genomes_project 4 168139015 168140062 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066716.1 MGP_NODShiLtJ_G0028415.1 mouse_genomes_project 4 129505900 129515283 + MGP_NODShiLtJ_P0066716 Mob3c protein_coding protein_coding MGP_NODShiLtJ_T0066717.1 MGP_NODShiLtJ_G0028415.1 mouse_genomes_project 4 129505905 129509516 + Mob3c protein_coding retained_intron MGP_NODShiLtJ_T0066718.1 MGP_NODShiLtJ_G0028415.1 mouse_genomes_project 4 129506466 129509346 + MGP_NODShiLtJ_P0066718 Mob3c protein_coding protein_coding MGP_NODShiLtJ_T0098034.1 MGP_NODShiLtJ_G0036446.1 mouse_genomes_project 4 65002580 65002665 + Gm26400 rRNA rRNA MGP_NODShiLtJ_T0100555.1 MGP_NODShiLtJ_G0038949.1 mouse_genomes_project 4 83204823 83204955 + Gm26379 snoRNA snoRNA MGP_NODShiLtJ_T0004389.1 MGP_NODShiLtJ_G0003822.1 mouse_genomes_project 4 49015205 49036169 + Gm12462 antisense antisense MGP_NODShiLtJ_T0065193.1 MGP_NODShiLtJ_G0028051.1 mouse_genomes_project 4 49828711 49851815 - MGP_NODShiLtJ_P0065193 Slc25a51 protein_coding protein_coding MGP_NODShiLtJ_T0065194.1 MGP_NODShiLtJ_G0028051.1 mouse_genomes_project 4 49828711 49851820 - MGP_NODShiLtJ_P0065194 Slc25a51 protein_coding protein_coding MGP_NODShiLtJ_T0065195.1 MGP_NODShiLtJ_G0028051.1 mouse_genomes_project 4 49831134 49851814 - MGP_NODShiLtJ_P0065195 Slc25a51 protein_coding protein_coding MGP_NODShiLtJ_T0065196.1 MGP_NODShiLtJ_G0028051.1 mouse_genomes_project 4 49831465 49851700 - MGP_NODShiLtJ_P0065196 Slc25a51 protein_coding protein_coding MGP_NODShiLtJ_T0065197.1 MGP_NODShiLtJ_G0028051.1 mouse_genomes_project 4 49831495 49836760 - MGP_NODShiLtJ_P0065197 Slc25a51 protein_coding protein_coding MGP_NODShiLtJ_T0065198.1 MGP_NODShiLtJ_G0028051.1 mouse_genomes_project 4 49850225 49851789 - Slc25a51 protein_coding processed_transcript MGP_NODShiLtJ_T0066138.1 MGP_NODShiLtJ_G0028297.1 mouse_genomes_project 4 114000245 114000644 - MGP_NODShiLtJ_P0066138 Gm10577 protein_coding protein_coding MGP_NODShiLtJ_T0010468.1 MGP_NODShiLtJ_G0008601.1 mouse_genomes_project 4 6928569 6928641 + Gm25677 miRNA miRNA MGP_NODShiLtJ_T0010536.1 MGP_NODShiLtJ_G0008669.1 mouse_genomes_project 4 152902791 152902867 + Gm25399 miRNA miRNA MGP_NODShiLtJ_T0101912.1 MGP_NODShiLtJ_G0040080.1 mouse_genomes_project 4 99707296 99708688 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0064435.1 MGP_NODShiLtJ_G0027882.1 mouse_genomes_project 4 12740906 12765344 - MGP_NODShiLtJ_P0064435 Otud6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064436.1 MGP_NODShiLtJ_G0027882.1 mouse_genomes_project 4 12742316 12765536 - MGP_NODShiLtJ_P0064436 Otud6b protein_coding protein_coding MGP_NODShiLtJ_T0100586.1 MGP_NODShiLtJ_G0038980.1 mouse_genomes_project 4 146319079 146319213 + Gm25261 snoRNA snoRNA MGP_NODShiLtJ_T0066991.1 MGP_NODShiLtJ_G0028465.1 mouse_genomes_project 4 131760350 131763735 - MGP_NODShiLtJ_P0066991 Dph2 protein_coding protein_coding MGP_NODShiLtJ_T0066992.1 MGP_NODShiLtJ_G0028465.1 mouse_genomes_project 4 131760614 131763723 - Dph2 protein_coding retained_intron MGP_NODShiLtJ_T0066993.1 MGP_NODShiLtJ_G0028465.1 mouse_genomes_project 4 131760623 131763726 - MGP_NODShiLtJ_P0066993 Dph2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066994.1 MGP_NODShiLtJ_G0028465.1 mouse_genomes_project 4 131762785 131763689 - Dph2 protein_coding retained_intron MGP_NODShiLtJ_T0014584.1 MGP_NODShiLtJ_G0012692.1 mouse_genomes_project 4 123033981 123035937 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066736.1 MGP_NODShiLtJ_G0028419.1 mouse_genomes_project 4 129597543 129607995 - MGP_NODShiLtJ_P0066736 Dmbx1 protein_coding protein_coding MGP_NODShiLtJ_T0066737.1 MGP_NODShiLtJ_G0028419.1 mouse_genomes_project 4 129597543 129623123 - MGP_NODShiLtJ_P0066737 Dmbx1 protein_coding protein_coding MGP_NODShiLtJ_T0066738.1 MGP_NODShiLtJ_G0028419.1 mouse_genomes_project 4 129597544 129623123 - MGP_NODShiLtJ_P0066738 Dmbx1 protein_coding protein_coding MGP_NODShiLtJ_T0004445.1 MGP_NODShiLtJ_G0003862.1 mouse_genomes_project 4 122566493 122601481 - 8030443G20Rik antisense antisense MGP_NODShiLtJ_T0014570.1 MGP_NODShiLtJ_G0012678.1 mouse_genomes_project 4 119492141 119493872 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067010.1 MGP_NODShiLtJ_G0028469.1 mouse_genomes_project 4 132037889 132082959 - MGP_NODShiLtJ_P0067010 Kdm4a protein_coding protein_coding MGP_NODShiLtJ_T0067011.1 MGP_NODShiLtJ_G0028469.1 mouse_genomes_project 4 132037891 132082570 - MGP_NODShiLtJ_P0067011 Kdm4a protein_coding protein_coding MGP_NODShiLtJ_T0067012.1 MGP_NODShiLtJ_G0028469.1 mouse_genomes_project 4 132037938 132082894 - MGP_NODShiLtJ_P0067012 Kdm4a protein_coding protein_coding MGP_NODShiLtJ_T0067013.1 MGP_NODShiLtJ_G0028469.1 mouse_genomes_project 4 132043324 132082862 - MGP_NODShiLtJ_P0067013 Kdm4a protein_coding protein_coding MGP_NODShiLtJ_T0067014.1 MGP_NODShiLtJ_G0028469.1 mouse_genomes_project 4 132047067 132048042 - Kdm4a protein_coding processed_transcript MGP_NODShiLtJ_T0067015.1 MGP_NODShiLtJ_G0028469.1 mouse_genomes_project 4 132050333 132062996 - Kdm4a protein_coding processed_transcript MGP_NODShiLtJ_T0068118.1 MGP_NODShiLtJ_G0028720.1 mouse_genomes_project 4 149711078 149721393 - MGP_NODShiLtJ_P0068118 Cnksr1 protein_coding protein_coding MGP_NODShiLtJ_T0068119.1 MGP_NODShiLtJ_G0028720.1 mouse_genomes_project 4 149711086 149721333 - Cnksr1 protein_coding processed_transcript MGP_NODShiLtJ_T0068120.1 MGP_NODShiLtJ_G0028720.1 mouse_genomes_project 4 149712391 149713466 - Cnksr1 protein_coding processed_transcript MGP_NODShiLtJ_T0068121.1 MGP_NODShiLtJ_G0028720.1 mouse_genomes_project 4 149713455 149716190 - Cnksr1 protein_coding processed_transcript MGP_NODShiLtJ_T0068122.1 MGP_NODShiLtJ_G0028720.1 mouse_genomes_project 4 149715501 149718979 - Cnksr1 protein_coding processed_transcript MGP_NODShiLtJ_T0066662.1 MGP_NODShiLtJ_G0028397.1 mouse_genomes_project 4 128417427 128418294 - MGP_NODShiLtJ_P0066662 Foxe3 protein_coding protein_coding MGP_NODShiLtJ_T0064530.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24610990 24707128 + protein_coding retained_intron MGP_NODShiLtJ_T0064531.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24610990 24728757 + MGP_NODShiLtJ_P0064531 protein_coding protein_coding MGP_NODShiLtJ_T0064532.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24611001 24619562 + MGP_NODShiLtJ_P0064532 protein_coding protein_coding MGP_NODShiLtJ_T0064533.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24611004 24611584 + protein_coding processed_transcript MGP_NODShiLtJ_T0064534.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24611083 24728753 + MGP_NODShiLtJ_P0064534 protein_coding protein_coding MGP_NODShiLtJ_T0064535.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24612436 24651624 + MGP_NODShiLtJ_P0064535 protein_coding protein_coding MGP_NODShiLtJ_T0064536.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24621638 24728756 + protein_coding retained_intron MGP_NODShiLtJ_T0064537.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24627140 24725792 + MGP_NODShiLtJ_P0064537 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064538.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24658811 24698430 + MGP_NODShiLtJ_P0064538 protein_coding protein_coding MGP_NODShiLtJ_T0064539.1 MGP_NODShiLtJ_G0027912.1 mouse_genomes_project 4 24703738 24717008 + protein_coding processed_transcript MGP_NODShiLtJ_T0001399.1 MGP_NODShiLtJ_G0001318.1 mouse_genomes_project 4 167405282 167407684 + TEC TEC MGP_NODShiLtJ_T0014534.1 MGP_NODShiLtJ_G0012642.1 mouse_genomes_project 4 105888022 105888332 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010545.1 MGP_NODShiLtJ_G0008678.1 mouse_genomes_project 4 157600543 157600620 + Gm25690 miRNA miRNA MGP_NODShiLtJ_T0065480.1 MGP_NODShiLtJ_G0028130.1 mouse_genomes_project 4 64009423 64179404 - MGP_NODShiLtJ_P0065480 Svep1 protein_coding protein_coding MGP_NODShiLtJ_T0065481.1 MGP_NODShiLtJ_G0028130.1 mouse_genomes_project 4 64112366 64179420 - Svep1 protein_coding processed_transcript MGP_NODShiLtJ_T0065482.1 MGP_NODShiLtJ_G0028130.1 mouse_genomes_project 4 64113729 64179666 - Svep1 protein_coding processed_transcript MGP_NODShiLtJ_T0065483.1 MGP_NODShiLtJ_G0028130.1 mouse_genomes_project 4 64150167 64179496 - Svep1 protein_coding processed_transcript MGP_NODShiLtJ_T0064274.1 MGP_NODShiLtJ_G0027850.1 mouse_genomes_project 4 3335036 3365998 + MGP_NODShiLtJ_P0064274 Sdcbp protein_coding protein_coding MGP_NODShiLtJ_T0064275.1 MGP_NODShiLtJ_G0027850.1 mouse_genomes_project 4 3335063 3365369 + MGP_NODShiLtJ_P0064275 Sdcbp protein_coding protein_coding MGP_NODShiLtJ_T0064276.1 MGP_NODShiLtJ_G0027850.1 mouse_genomes_project 4 3335094 3343512 + Sdcbp protein_coding processed_transcript MGP_NODShiLtJ_T0064277.1 MGP_NODShiLtJ_G0027850.1 mouse_genomes_project 4 3335095 3362825 + MGP_NODShiLtJ_P0064277 Sdcbp protein_coding protein_coding MGP_NODShiLtJ_T0064278.1 MGP_NODShiLtJ_G0027850.1 mouse_genomes_project 4 3335098 3353825 + Sdcbp protein_coding processed_transcript MGP_NODShiLtJ_T0064279.1 MGP_NODShiLtJ_G0027850.1 mouse_genomes_project 4 3335099 3354660 + MGP_NODShiLtJ_P0064279 Sdcbp protein_coding protein_coding MGP_NODShiLtJ_T0064280.1 MGP_NODShiLtJ_G0027850.1 mouse_genomes_project 4 3335099 3379454 + MGP_NODShiLtJ_P0064280 Sdcbp protein_coding protein_coding MGP_NODShiLtJ_T0064281.1 MGP_NODShiLtJ_G0027850.1 mouse_genomes_project 4 3346223 3362709 + MGP_NODShiLtJ_P0064281 Sdcbp protein_coding protein_coding MGP_NODShiLtJ_T0014543.1 MGP_NODShiLtJ_G0012651.1 mouse_genomes_project 4 110914070 110914526 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100530.1 MGP_NODShiLtJ_G0038924.1 mouse_genomes_project 4 45296336 45296414 - Gm23090 snoRNA snoRNA MGP_NODShiLtJ_T0014621.1 MGP_NODShiLtJ_G0012729.1 mouse_genomes_project 4 135056752 135057190 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065347.1 MGP_NODShiLtJ_G0028092.1 mouse_genomes_project 4 54412934 54428598 - MGP_NODShiLtJ_P0065347 Tmem246 protein_coding protein_coding MGP_NODShiLtJ_T0065348.1 MGP_NODShiLtJ_G0028092.1 mouse_genomes_project 4 54415194 54428192 - MGP_NODShiLtJ_P0065348 Tmem246 protein_coding protein_coding MGP_NODShiLtJ_T0065349.1 MGP_NODShiLtJ_G0028092.1 mouse_genomes_project 4 54415480 54422331 - MGP_NODShiLtJ_P0065349 Tmem246 protein_coding protein_coding MGP_NODShiLtJ_T0067730.1 MGP_NODShiLtJ_G0028643.1 mouse_genomes_project 4 144913105 144943263 + Ptp4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0067731.1 MGP_NODShiLtJ_G0028643.1 mouse_genomes_project 4 144913108 144914410 + Ptp4a2 protein_coding retained_intron MGP_NODShiLtJ_T0067732.1 MGP_NODShiLtJ_G0028643.1 mouse_genomes_project 4 144924859 144943227 + Ptp4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0067733.1 MGP_NODShiLtJ_G0028643.1 mouse_genomes_project 4 144924900 144943872 + Ptp4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0067734.1 MGP_NODShiLtJ_G0028643.1 mouse_genomes_project 4 144943176 144952695 + Ptp4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0067735.1 MGP_NODShiLtJ_G0028643.1 mouse_genomes_project 4 144944947 144954000 + MGP_NODShiLtJ_P0067735 Ptp4a2 protein_coding protein_coding MGP_NODShiLtJ_T0007946.1 MGP_NODShiLtJ_G0006478.1 mouse_genomes_project 4 156555315 156562603 + Gm13021 lincRNA lincRNA MGP_NODShiLtJ_T0065918.1 MGP_NODShiLtJ_G0028232.1 mouse_genomes_project 4 99644913 99645483 - MGP_NODShiLtJ_P0065918 Ifna14 protein_coding protein_coding MGP_NODShiLtJ_T0066029.1 MGP_NODShiLtJ_G0028269.1 mouse_genomes_project 4 108752939 108792499 - MGP_NODShiLtJ_P0066029 Cyp2j7 protein_coding protein_coding MGP_NODShiLtJ_T0007755.1 MGP_NODShiLtJ_G0006333.1 mouse_genomes_project 4 27296570 27392128 - lincRNA lincRNA MGP_NODShiLtJ_T0007947.1 MGP_NODShiLtJ_G0006479.1 mouse_genomes_project 4 156568616 156594651 + Gm13026 lincRNA lincRNA MGP_NODShiLtJ_T0010511.1 MGP_NODShiLtJ_G0008644.1 mouse_genomes_project 4 133124311 133124377 + Mir1957a miRNA miRNA MGP_NODShiLtJ_T0067544.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143649750 143753869 + MGP_NODShiLtJ_P0067544 Phc2 protein_coding protein_coding MGP_NODShiLtJ_T0067545.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143649786 143711786 + MGP_NODShiLtJ_P0067545 Phc2 protein_coding protein_coding MGP_NODShiLtJ_T0067546.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143686647 143705237 + Phc2 protein_coding retained_intron MGP_NODShiLtJ_T0067547.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143686704 143753869 + MGP_NODShiLtJ_P0067547 Phc2 protein_coding protein_coding MGP_NODShiLtJ_T0067548.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143709755 143724197 + Phc2 protein_coding retained_intron MGP_NODShiLtJ_T0067549.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143727347 143753869 + MGP_NODShiLtJ_P0067549 Phc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067550.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143727351 143753869 + MGP_NODShiLtJ_P0067550 Phc2 protein_coding protein_coding MGP_NODShiLtJ_T0067551.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143727448 143749208 + MGP_NODShiLtJ_P0067551 Phc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067552.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143727476 143745999 + MGP_NODShiLtJ_P0067552 Phc2 protein_coding protein_coding MGP_NODShiLtJ_T0067553.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143727699 143749065 + MGP_NODShiLtJ_P0067553 Phc2 protein_coding protein_coding MGP_NODShiLtJ_T0067554.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143727737 143744463 + MGP_NODShiLtJ_P0067554 Phc2 protein_coding protein_coding MGP_NODShiLtJ_T0067555.1 MGP_NODShiLtJ_G0028609.1 mouse_genomes_project 4 143727748 143748123 + MGP_NODShiLtJ_P0067555 Phc2 protein_coding protein_coding MGP_NODShiLtJ_T0064760.1 MGP_NODShiLtJ_G0027967.1 mouse_genomes_project 4 45086585 45102105 - MGP_NODShiLtJ_P0064760 Aqp7 protein_coding protein_coding MGP_NODShiLtJ_T0064761.1 MGP_NODShiLtJ_G0027967.1 mouse_genomes_project 4 45086585 45104796 - MGP_NODShiLtJ_P0064761 Aqp7 protein_coding protein_coding MGP_NODShiLtJ_T0064762.1 MGP_NODShiLtJ_G0027967.1 mouse_genomes_project 4 45089361 45097634 - Aqp7 protein_coding processed_transcript MGP_NODShiLtJ_T0064763.1 MGP_NODShiLtJ_G0027967.1 mouse_genomes_project 4 45089603 45090778 - Aqp7 protein_coding processed_transcript MGP_NODShiLtJ_T0068075.1 MGP_NODShiLtJ_G0028712.1 mouse_genomes_project 4 149504945 149510114 + MGP_NODShiLtJ_P0068075 Zfp683 protein_coding protein_coding MGP_NODShiLtJ_T0069460.1 MGP_NODShiLtJ_G0029025.1 mouse_genomes_project 4 173544539 173546679 + MGP_NODShiLtJ_P0069460 Fndc10 protein_coding protein_coding MGP_NODShiLtJ_T0101929.1 MGP_NODShiLtJ_G0040097.1 mouse_genomes_project 4 135578091 135583274 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017905.1 MGP_NODShiLtJ_G0015417.1 mouse_genomes_project 4 70530286 70706011 + 8030451A03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017906.1 MGP_NODShiLtJ_G0015417.1 mouse_genomes_project 4 70530375 70600897 + 8030451A03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017907.1 MGP_NODShiLtJ_G0015417.1 mouse_genomes_project 4 70530392 70533783 + 8030451A03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017908.1 MGP_NODShiLtJ_G0015417.1 mouse_genomes_project 4 70704639 70705032 + 8030451A03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0014289.1 MGP_NODShiLtJ_G0012397.1 mouse_genomes_project 4 11191120 11191492 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004464.1 MGP_NODShiLtJ_G0003878.1 mouse_genomes_project 4 133128273 133133305 - Gm12868 antisense antisense MGP_NODShiLtJ_T0066033.1 MGP_NODShiLtJ_G0028273.1 mouse_genomes_project 4 109170313 109193754 - MGP_NODShiLtJ_P0066033 Cyp2j9 protein_coding protein_coding MGP_NODShiLtJ_T0066034.1 MGP_NODShiLtJ_G0028273.1 mouse_genomes_project 4 109178636 109193754 - Cyp2j9 protein_coding retained_intron MGP_NODShiLtJ_T0014381.1 MGP_NODShiLtJ_G0012489.1 mouse_genomes_project 4 41467788 41468217 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099297.1 MGP_NODShiLtJ_G0037691.1 mouse_genomes_project 4 131029729 131029845 + Gm23143 snRNA snRNA MGP_NODShiLtJ_T0010476.1 MGP_NODShiLtJ_G0008609.1 mouse_genomes_project 4 23525924 23526014 - Gm25978 miRNA miRNA MGP_NODShiLtJ_T0100536.1 MGP_NODShiLtJ_G0038930.1 mouse_genomes_project 4 55232366 55232498 + Gm25485 snoRNA snoRNA MGP_NODShiLtJ_T0068990.1 MGP_NODShiLtJ_G0028944.1 mouse_genomes_project 4 166753480 166771309 - MGP_NODShiLtJ_P0068990 Nmnat1 protein_coding protein_coding MGP_NODShiLtJ_T0068991.1 MGP_NODShiLtJ_G0028944.1 mouse_genomes_project 4 166754663 166771305 - MGP_NODShiLtJ_P0068991 Nmnat1 protein_coding protein_coding MGP_NODShiLtJ_T0068992.1 MGP_NODShiLtJ_G0028944.1 mouse_genomes_project 4 166754703 166771279 - MGP_NODShiLtJ_P0068992 Nmnat1 protein_coding protein_coding MGP_NODShiLtJ_T0068993.1 MGP_NODShiLtJ_G0028944.1 mouse_genomes_project 4 166760491 166771270 - MGP_NODShiLtJ_P0068993 Nmnat1 protein_coding protein_coding MGP_NODShiLtJ_T0065689.1 MGP_NODShiLtJ_G0028189.1 mouse_genomes_project 4 76211289 76419869 - MGP_NODShiLtJ_P0065689 Brinp1 protein_coding protein_coding MGP_NODShiLtJ_T0065690.1 MGP_NODShiLtJ_G0028189.1 mouse_genomes_project 4 76248984 76297441 - Brinp1 protein_coding processed_transcript MGP_NODShiLtJ_T0065691.1 MGP_NODShiLtJ_G0028189.1 mouse_genomes_project 4 76282544 76285378 - Brinp1 protein_coding processed_transcript MGP_NODShiLtJ_T0068147.1 MGP_NODShiLtJ_G0028728.1 mouse_genomes_project 4 149840400 149850334 + MGP_NODShiLtJ_P0068147 Slc30a2 protein_coding protein_coding MGP_NODShiLtJ_T0068148.1 MGP_NODShiLtJ_G0028728.1 mouse_genomes_project 4 149840505 149850194 + MGP_NODShiLtJ_P0068148 Slc30a2 protein_coding protein_coding MGP_NODShiLtJ_T0064879.1 MGP_NODShiLtJ_G0028000.1 mouse_genomes_project 4 47179329 47185582 - MGP_NODShiLtJ_P0064879 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064880.1 MGP_NODShiLtJ_G0028000.1 mouse_genomes_project 4 47179334 47212146 - MGP_NODShiLtJ_P0064880 protein_coding protein_coding MGP_NODShiLtJ_T0064881.1 MGP_NODShiLtJ_G0028000.1 mouse_genomes_project 4 47193102 47194567 - protein_coding processed_transcript MGP_NODShiLtJ_T0064882.1 MGP_NODShiLtJ_G0028000.1 mouse_genomes_project 4 47196646 47199741 - protein_coding processed_transcript MGP_NODShiLtJ_T0064883.1 MGP_NODShiLtJ_G0028000.1 mouse_genomes_project 4 47202942 47203966 - protein_coding processed_transcript MGP_NODShiLtJ_T0064884.1 MGP_NODShiLtJ_G0028000.1 mouse_genomes_project 4 47203919 47212096 - protein_coding processed_transcript MGP_NODShiLtJ_T0066660.1 MGP_NODShiLtJ_G0028395.1 mouse_genomes_project 4 128303058 128339604 + MGP_NODShiLtJ_P0066660 Gm12830 protein_coding protein_coding MGP_NODShiLtJ_T0004512.1 MGP_NODShiLtJ_G0003917.1 mouse_genomes_project 4 157657312 157668347 + Gm13075 antisense antisense MGP_NODShiLtJ_T0004513.1 MGP_NODShiLtJ_G0003917.1 mouse_genomes_project 4 157657340 157669312 + Gm13075 antisense antisense MGP_NODShiLtJ_T0010537.1 MGP_NODShiLtJ_G0008670.1 mouse_genomes_project 4 153308246 153308331 + Mir7018 miRNA miRNA MGP_NODShiLtJ_T0068810.1 MGP_NODShiLtJ_G0028908.1 mouse_genomes_project 4 162010378 162064209 - MGP_NODShiLtJ_P0068810 Tnfrsf8 protein_coding protein_coding MGP_NODShiLtJ_T0068811.1 MGP_NODShiLtJ_G0028908.1 mouse_genomes_project 4 162010380 162064226 - MGP_NODShiLtJ_P0068811 Tnfrsf8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010478.1 MGP_NODShiLtJ_G0008611.1 mouse_genomes_project 4 32743270 32743379 - Gm22831 miRNA miRNA MGP_NODShiLtJ_T0068524.1 MGP_NODShiLtJ_G0028819.1 mouse_genomes_project 4 155319179 155326857 + MGP_NODShiLtJ_P0068524 Akr7a5 protein_coding protein_coding MGP_NODShiLtJ_T0068525.1 MGP_NODShiLtJ_G0028819.1 mouse_genomes_project 4 155325012 155325841 + Akr7a5 protein_coding processed_transcript MGP_NODShiLtJ_T0065500.1 MGP_NODShiLtJ_G0028133.1 mouse_genomes_project 4 64831021 64831963 - MGP_NODShiLtJ_P0065500 Olfr267 protein_coding protein_coding MGP_NODShiLtJ_T0065590.1 MGP_NODShiLtJ_G0028162.1 mouse_genomes_project 4 68901542 68922552 + MGP_NODShiLtJ_P0065590 Bspry protein_coding protein_coding MGP_NODShiLtJ_T0065591.1 MGP_NODShiLtJ_G0028162.1 mouse_genomes_project 4 68901542 68922552 + MGP_NODShiLtJ_P0065591 Bspry protein_coding protein_coding MGP_NODShiLtJ_T0065592.1 MGP_NODShiLtJ_G0028162.1 mouse_genomes_project 4 68901578 68908832 + MGP_NODShiLtJ_P0065592 Bspry protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010507.1 MGP_NODShiLtJ_G0008640.1 mouse_genomes_project 4 121614425 121614518 + Mir6397 miRNA miRNA MGP_NODShiLtJ_T0066753.1 MGP_NODShiLtJ_G0028422.1 mouse_genomes_project 4 129764263 129775283 - Uqcrh protein_coding processed_transcript MGP_NODShiLtJ_T0066754.1 MGP_NODShiLtJ_G0028422.1 mouse_genomes_project 4 129764263 129775320 - MGP_NODShiLtJ_P0066754 Uqcrh protein_coding protein_coding MGP_NODShiLtJ_T0066755.1 MGP_NODShiLtJ_G0028422.1 mouse_genomes_project 4 129764263 129775280 - MGP_NODShiLtJ_P0066755 Uqcrh protein_coding protein_coding MGP_NODShiLtJ_T0066756.1 MGP_NODShiLtJ_G0028422.1 mouse_genomes_project 4 129764264 129769076 - Uqcrh protein_coding retained_intron MGP_NODShiLtJ_T0066757.1 MGP_NODShiLtJ_G0028422.1 mouse_genomes_project 4 129769098 129775308 - Uqcrh protein_coding retained_intron MGP_NODShiLtJ_T0014265.1 MGP_NODShiLtJ_G0012373.1 mouse_genomes_project 4 1806966 1807334 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014519.1 MGP_NODShiLtJ_G0012627.1 mouse_genomes_project 4 99186998 99187273 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064707.1 MGP_NODShiLtJ_G0027954.1 mouse_genomes_project 4 44128861 44188322 + MGP_NODShiLtJ_P0064707 Aco1 protein_coding protein_coding MGP_NODShiLtJ_T0064708.1 MGP_NODShiLtJ_G0027954.1 mouse_genomes_project 4 44150532 44156172 + Aco1 protein_coding processed_transcript MGP_NODShiLtJ_T0064709.1 MGP_NODShiLtJ_G0027954.1 mouse_genomes_project 4 44153688 44163259 + Aco1 protein_coding processed_transcript MGP_NODShiLtJ_T0064710.1 MGP_NODShiLtJ_G0027954.1 mouse_genomes_project 4 44177922 44186388 + Aco1 protein_coding processed_transcript MGP_NODShiLtJ_T0064540.1 MGP_NODShiLtJ_G0027913.1 mouse_genomes_project 4 24738922 24947107 - MGP_NODShiLtJ_P0064540 Klhl32 protein_coding protein_coding MGP_NODShiLtJ_T0064541.1 MGP_NODShiLtJ_G0027913.1 mouse_genomes_project 4 24738922 24999563 - MGP_NODShiLtJ_P0064541 Klhl32 protein_coding protein_coding MGP_NODShiLtJ_T0064542.1 MGP_NODShiLtJ_G0027913.1 mouse_genomes_project 4 24742587 24890244 - MGP_NODShiLtJ_P0064542 Klhl32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064543.1 MGP_NODShiLtJ_G0027913.1 mouse_genomes_project 4 24742676 24999370 - MGP_NODShiLtJ_P0064543 Klhl32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064544.1 MGP_NODShiLtJ_G0027913.1 mouse_genomes_project 4 24743894 24999525 - MGP_NODShiLtJ_P0064544 Klhl32 protein_coding protein_coding MGP_NODShiLtJ_T0064545.1 MGP_NODShiLtJ_G0027913.1 mouse_genomes_project 4 24781274 24999370 - Klhl32 protein_coding retained_intron MGP_NODShiLtJ_T0064546.1 MGP_NODShiLtJ_G0027913.1 mouse_genomes_project 4 24781816 24809807 - Klhl32 protein_coding processed_transcript MGP_NODShiLtJ_T0066828.1 MGP_NODShiLtJ_G0028436.1 mouse_genomes_project 4 130389131 130406123 - MGP_NODShiLtJ_P0066828 Akr1a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0066829.1 MGP_NODShiLtJ_G0028436.1 mouse_genomes_project 4 130389139 130406147 - MGP_NODShiLtJ_P0066829 Akr1a1 protein_coding protein_coding MGP_NODShiLtJ_T0066830.1 MGP_NODShiLtJ_G0028436.1 mouse_genomes_project 4 130389140 130405863 - Akr1a1 protein_coding processed_transcript MGP_NODShiLtJ_T0066831.1 MGP_NODShiLtJ_G0028436.1 mouse_genomes_project 4 130389140 130390627 - Akr1a1 protein_coding processed_transcript MGP_NODShiLtJ_T0066832.1 MGP_NODShiLtJ_G0028436.1 mouse_genomes_project 4 130391718 130403941 - MGP_NODShiLtJ_P0066832 Akr1a1 protein_coding protein_coding MGP_NODShiLtJ_T0066820.1 MGP_NODShiLtJ_G0028435.1 mouse_genomes_project 4 130347844 130377259 - MGP_NODShiLtJ_P0066820 Nasp protein_coding protein_coding MGP_NODShiLtJ_T0066821.1 MGP_NODShiLtJ_G0028435.1 mouse_genomes_project 4 130348401 130377703 - MGP_NODShiLtJ_P0066821 Nasp protein_coding protein_coding MGP_NODShiLtJ_T0066822.1 MGP_NODShiLtJ_G0028435.1 mouse_genomes_project 4 130348401 130377240 - MGP_NODShiLtJ_P0066822 Nasp protein_coding protein_coding MGP_NODShiLtJ_T0066823.1 MGP_NODShiLtJ_G0028435.1 mouse_genomes_project 4 130349518 130353041 - Nasp protein_coding processed_transcript MGP_NODShiLtJ_T0066824.1 MGP_NODShiLtJ_G0028435.1 mouse_genomes_project 4 130349584 130351718 - Nasp protein_coding processed_transcript MGP_NODShiLtJ_T0066825.1 MGP_NODShiLtJ_G0028435.1 mouse_genomes_project 4 130358259 130377255 - Nasp protein_coding processed_transcript MGP_NODShiLtJ_T0066826.1 MGP_NODShiLtJ_G0028435.1 mouse_genomes_project 4 130366245 130373697 - Nasp protein_coding processed_transcript MGP_NODShiLtJ_T0066827.1 MGP_NODShiLtJ_G0028435.1 mouse_genomes_project 4 130367847 130377210 - Nasp protein_coding processed_transcript MGP_NODShiLtJ_T0064223.1 MGP_NODShiLtJ_G0027837.1 mouse_genomes_project 4 190163 239882 + MGP_NODShiLtJ_P0064223 Tgs1 protein_coding protein_coding MGP_NODShiLtJ_T0064224.1 MGP_NODShiLtJ_G0027837.1 mouse_genomes_project 4 190238 199220 + Tgs1 protein_coding retained_intron MGP_NODShiLtJ_T0064225.1 MGP_NODShiLtJ_G0027837.1 mouse_genomes_project 4 208874 213895 + Tgs1 protein_coding processed_transcript MGP_NODShiLtJ_T0064226.1 MGP_NODShiLtJ_G0027837.1 mouse_genomes_project 4 213842 225913 + Tgs1 protein_coding retained_intron MGP_NODShiLtJ_T0064227.1 MGP_NODShiLtJ_G0027837.1 mouse_genomes_project 4 228998 238546 + Tgs1 protein_coding retained_intron MGP_NODShiLtJ_T0069331.1 MGP_NODShiLtJ_G0029005.1 mouse_genomes_project 4 172689330 172692865 - Fam213b protein_coding processed_transcript MGP_NODShiLtJ_T0069332.1 MGP_NODShiLtJ_G0029005.1 mouse_genomes_project 4 172690225 172692937 - MGP_NODShiLtJ_P0069332 Fam213b protein_coding protein_coding MGP_NODShiLtJ_T0069333.1 MGP_NODShiLtJ_G0029005.1 mouse_genomes_project 4 172691161 172692962 - MGP_NODShiLtJ_P0069333 Fam213b protein_coding protein_coding MGP_NODShiLtJ_T0014424.1 MGP_NODShiLtJ_G0012532.1 mouse_genomes_project 4 57844326 57845715 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067648.1 MGP_NODShiLtJ_G0028630.1 mouse_genomes_project 4 144594541 144596944 + MGP_NODShiLtJ_P0067648 Marcksl1 protein_coding protein_coding MGP_NODShiLtJ_T0064228.1 MGP_NODShiLtJ_G0027838.1 mouse_genomes_project 4 309492 472321 + MGP_NODShiLtJ_P0064228 Lyn protein_coding protein_coding MGP_NODShiLtJ_T0064229.1 MGP_NODShiLtJ_G0027838.1 mouse_genomes_project 4 309504 472320 + MGP_NODShiLtJ_P0064229 Lyn protein_coding protein_coding MGP_NODShiLtJ_T0064230.1 MGP_NODShiLtJ_G0027838.1 mouse_genomes_project 4 309507 405441 + Lyn protein_coding processed_transcript MGP_NODShiLtJ_T0064231.1 MGP_NODShiLtJ_G0027838.1 mouse_genomes_project 4 405078 472024 + MGP_NODShiLtJ_P0064231 Lyn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067437.1 MGP_NODShiLtJ_G0028582.1 mouse_genomes_project 4 141116740 141122063 - Adprhl2 protein_coding processed_transcript MGP_NODShiLtJ_T0067438.1 MGP_NODShiLtJ_G0028582.1 mouse_genomes_project 4 141116740 141122397 - MGP_NODShiLtJ_P0067438 Adprhl2 protein_coding protein_coding MGP_NODShiLtJ_T0067439.1 MGP_NODShiLtJ_G0028582.1 mouse_genomes_project 4 141116745 141122161 - Adprhl2 protein_coding processed_transcript MGP_NODShiLtJ_T0067440.1 MGP_NODShiLtJ_G0028582.1 mouse_genomes_project 4 141118844 141122055 - Adprhl2 protein_coding processed_transcript MGP_NODShiLtJ_T0014690.1 MGP_NODShiLtJ_G0012798.1 mouse_genomes_project 4 158279958 158280523 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010534.1 MGP_NODShiLtJ_G0008667.1 mouse_genomes_project 4 151091222 151091351 - Gm25317 miRNA miRNA MGP_NODShiLtJ_T0004430.1 MGP_NODShiLtJ_G0003851.1 mouse_genomes_project 4 112606914 112659898 - Gm12682 antisense antisense MGP_NODShiLtJ_T0098038.1 MGP_NODShiLtJ_G0036450.1 mouse_genomes_project 4 125511670 125511786 - n-R5s191 rRNA rRNA MGP_NODShiLtJ_T0099288.1 MGP_NODShiLtJ_G0037682.1 mouse_genomes_project 4 122071959 122072062 + Gm23138 snRNA snRNA MGP_NODShiLtJ_T0068573.1 MGP_NODShiLtJ_G0028831.1 mouse_genomes_project 4 156886354 156908193 + MGP_NODShiLtJ_P0068573 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068574.1 MGP_NODShiLtJ_G0028831.1 mouse_genomes_project 4 156887251 156895760 + MGP_NODShiLtJ_P0068574 protein_coding protein_coding MGP_NODShiLtJ_T0068575.1 MGP_NODShiLtJ_G0028831.1 mouse_genomes_project 4 156899678 156902308 + protein_coding processed_transcript MGP_NODShiLtJ_T0068576.1 MGP_NODShiLtJ_G0028831.1 mouse_genomes_project 4 156899705 156902216 + protein_coding processed_transcript MGP_NODShiLtJ_T0004460.1 MGP_NODShiLtJ_G0003874.1 mouse_genomes_project 4 131846839 131866849 + 9530034E10Rik antisense antisense MGP_NODShiLtJ_T0007747.1 MGP_NODShiLtJ_G0006326.1 mouse_genomes_project 4 14597671 14649549 + Gm11861 lincRNA lincRNA MGP_NODShiLtJ_T0100592.1 MGP_NODShiLtJ_G0038986.1 mouse_genomes_project 4 147512915 147513120 - Snora73b snoRNA snoRNA MGP_NODShiLtJ_T0017904.1 MGP_NODShiLtJ_G0015416.1 mouse_genomes_project 4 63717172 63723345 - Gm12526 processed_transcript processed_transcript MGP_NODShiLtJ_T0017934.1 MGP_NODShiLtJ_G0015437.1 mouse_genomes_project 4 132953473 132983402 + Gm12861 processed_transcript processed_transcript MGP_NODShiLtJ_T0004565.1 MGP_NODShiLtJ_G0003954.1 mouse_genomes_project 4 173907436 173910373 - Gm16008 antisense antisense MGP_NODShiLtJ_T0004566.1 MGP_NODShiLtJ_G0003954.1 mouse_genomes_project 4 173910275 173919388 - Gm16008 antisense antisense MGP_NODShiLtJ_T0004567.1 MGP_NODShiLtJ_G0003954.1 mouse_genomes_project 4 173914015 173919367 - Gm16008 antisense antisense MGP_NODShiLtJ_T0067075.1 MGP_NODShiLtJ_G0028492.1 mouse_genomes_project 4 132943728 132951083 + MGP_NODShiLtJ_P0067075 Lao1 protein_coding protein_coding MGP_NODShiLtJ_T0067076.1 MGP_NODShiLtJ_G0028492.1 mouse_genomes_project 4 132947545 132950254 + Lao1 protein_coding processed_transcript MGP_NODShiLtJ_T0014418.1 MGP_NODShiLtJ_G0012526.1 mouse_genomes_project 4 54924208 54924703 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064262.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2555057 2715889 + Fam110b protein_coding processed_transcript MGP_NODShiLtJ_T0064263.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2555088 2718608 + MGP_NODShiLtJ_P0064263 Fam110b protein_coding protein_coding MGP_NODShiLtJ_T0064264.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2555092 2644340 + Fam110b protein_coding retained_intron MGP_NODShiLtJ_T0064265.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2555157 2716001 + Fam110b protein_coding processed_transcript MGP_NODShiLtJ_T0064266.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2555202 3060019 + Fam110b protein_coding processed_transcript MGP_NODShiLtJ_T0064267.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2633041 2718608 + MGP_NODShiLtJ_P0064267 Fam110b protein_coding protein_coding MGP_NODShiLtJ_T0064268.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2689656 2716352 + MGP_NODShiLtJ_P0064268 Fam110b protein_coding protein_coding MGP_NODShiLtJ_T0064269.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2689656 2717453 + MGP_NODShiLtJ_P0064269 Fam110b protein_coding protein_coding MGP_NODShiLtJ_T0064270.1 MGP_NODShiLtJ_G0027847.1 mouse_genomes_project 4 2715590 2716038 + Fam110b protein_coding processed_transcript MGP_NODShiLtJ_T0014454.1 MGP_NODShiLtJ_G0012562.1 mouse_genomes_project 4 69390254 69390918 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064477.1 MGP_NODShiLtJ_G0027901.1 mouse_genomes_project 4 19323190 19349412 + MGP_NODShiLtJ_P0064477 Ggh protein_coding protein_coding MGP_NODShiLtJ_T0011476.1 MGP_NODShiLtJ_G0009609.1 mouse_genomes_project 4 159794296 159794604 + Gm26313 misc_RNA misc_RNA MGP_NODShiLtJ_T0065323.1 MGP_NODShiLtJ_G0028082.1 mouse_genomes_project 4 53241307 53264403 + MGP_NODShiLtJ_P0065323 Msantd3 protein_coding protein_coding MGP_NODShiLtJ_T0065324.1 MGP_NODShiLtJ_G0028082.1 mouse_genomes_project 4 53241451 53264062 + MGP_NODShiLtJ_P0065324 Msantd3 protein_coding protein_coding MGP_NODShiLtJ_T0065325.1 MGP_NODShiLtJ_G0028082.1 mouse_genomes_project 4 53262431 53264403 + Msantd3 protein_coding processed_transcript MGP_NODShiLtJ_T0068952.1 MGP_NODShiLtJ_G0028939.1 mouse_genomes_project 4 166361983 166373907 - MGP_NODShiLtJ_P0068952 Apitd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068953.1 MGP_NODShiLtJ_G0028939.1 mouse_genomes_project 4 166363315 166373928 - MGP_NODShiLtJ_P0068953 Apitd1 protein_coding protein_coding MGP_NODShiLtJ_T0068954.1 MGP_NODShiLtJ_G0028939.1 mouse_genomes_project 4 166363322 166365232 - Apitd1 protein_coding retained_intron MGP_NODShiLtJ_T0068955.1 MGP_NODShiLtJ_G0028939.1 mouse_genomes_project 4 166363548 166373933 - MGP_NODShiLtJ_P0068955 Apitd1 protein_coding protein_coding MGP_NODShiLtJ_T0068956.1 MGP_NODShiLtJ_G0028939.1 mouse_genomes_project 4 166363551 166373924 - MGP_NODShiLtJ_P0068956 Apitd1 protein_coding protein_coding MGP_NODShiLtJ_T0068957.1 MGP_NODShiLtJ_G0028939.1 mouse_genomes_project 4 166366138 166373936 - MGP_NODShiLtJ_P0068957 Apitd1 protein_coding protein_coding MGP_NODShiLtJ_T0067176.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134514695 134565496 + Scmh1 protein_coding processed_transcript MGP_NODShiLtJ_T0067177.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134514721 134651984 + MGP_NODShiLtJ_P0067177 Scmh1 protein_coding protein_coding MGP_NODShiLtJ_T0067178.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134514780 134576174 + Scmh1 protein_coding processed_transcript MGP_NODShiLtJ_T0067179.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134514795 134556534 + Scmh1 protein_coding processed_transcript MGP_NODShiLtJ_T0067180.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134514842 134576139 + MGP_NODShiLtJ_P0067180 Scmh1 protein_coding protein_coding MGP_NODShiLtJ_T0067181.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134554948 134651984 + MGP_NODShiLtJ_P0067181 Scmh1 protein_coding protein_coding MGP_NODShiLtJ_T0067182.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134562488 134651962 + MGP_NODShiLtJ_P0067182 Scmh1 protein_coding protein_coding MGP_NODShiLtJ_T0067183.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134575134 134651059 + MGP_NODShiLtJ_P0067183 Scmh1 protein_coding protein_coding MGP_NODShiLtJ_T0067184.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134620867 134651984 + Scmh1 protein_coding processed_transcript MGP_NODShiLtJ_T0067185.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134622396 134643817 + MGP_NODShiLtJ_P0067185 Scmh1 protein_coding protein_coding MGP_NODShiLtJ_T0067186.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134637464 134651984 + Scmh1 protein_coding processed_transcript MGP_NODShiLtJ_T0067187.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134637517 134651601 + Scmh1 protein_coding processed_transcript MGP_NODShiLtJ_T0067188.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134649628 134651020 + Scmh1 protein_coding processed_transcript MGP_NODShiLtJ_T0067189.1 MGP_NODShiLtJ_G0028514.1 mouse_genomes_project 4 134650954 134651986 + Scmh1 protein_coding processed_transcript MGP_NODShiLtJ_T0099277.1 MGP_NODShiLtJ_G0037671.1 mouse_genomes_project 4 105889816 105889923 + Gm24796 snRNA snRNA MGP_NODShiLtJ_T0068496.1 MGP_NODShiLtJ_G0028812.1 mouse_genomes_project 4 154948859 154950108 + MGP_NODShiLtJ_P0068496 Rnf186 protein_coding protein_coding MGP_NODShiLtJ_T0014597.1 MGP_NODShiLtJ_G0012705.1 mouse_genomes_project 4 129333988 129335080 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004496.1 MGP_NODShiLtJ_G0003903.1 mouse_genomes_project 4 150873366 150875537 + Gm12984 antisense antisense MGP_NODShiLtJ_T0068648.1 MGP_NODShiLtJ_G0028849.1 mouse_genomes_project 4 157639642 157656682 - MGP_NODShiLtJ_P0068648 Clcnka protein_coding protein_coding MGP_NODShiLtJ_T0068649.1 MGP_NODShiLtJ_G0028849.1 mouse_genomes_project 4 157639642 157657208 - MGP_NODShiLtJ_P0068649 Clcnka protein_coding protein_coding MGP_NODShiLtJ_T0068650.1 MGP_NODShiLtJ_G0028849.1 mouse_genomes_project 4 157650053 157653369 - Clcnka protein_coding retained_intron MGP_NODShiLtJ_T0068651.1 MGP_NODShiLtJ_G0028849.1 mouse_genomes_project 4 157653660 157657058 - MGP_NODShiLtJ_P0068651 Clcnka protein_coding protein_coding MGP_NODShiLtJ_T0014601.1 MGP_NODShiLtJ_G0012709.1 mouse_genomes_project 4 130661926 130662802 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004387.1 MGP_NODShiLtJ_G0003820.1 mouse_genomes_project 4 47902892 47912846 - Gm12473 antisense antisense MGP_NODShiLtJ_T0100572.1 MGP_NODShiLtJ_G0038966.1 mouse_genomes_project 4 130978859 130978963 - Gm26330 snoRNA snoRNA MGP_NODShiLtJ_T0067262.1 MGP_NODShiLtJ_G0028539.1 mouse_genomes_project 4 137592505 137606413 - MGP_NODShiLtJ_P0067262 Ppie protein_coding protein_coding MGP_NODShiLtJ_T0067263.1 MGP_NODShiLtJ_G0028539.1 mouse_genomes_project 4 137592710 137603360 - Ppie protein_coding processed_transcript MGP_NODShiLtJ_T0067264.1 MGP_NODShiLtJ_G0028539.1 mouse_genomes_project 4 137593091 137605487 - Ppie protein_coding processed_transcript MGP_NODShiLtJ_T0067265.1 MGP_NODShiLtJ_G0028539.1 mouse_genomes_project 4 137602863 137606392 - Ppie protein_coding processed_transcript MGP_NODShiLtJ_T0068812.1 MGP_NODShiLtJ_G0028909.1 mouse_genomes_project 4 164651656 164662983 - MGP_NODShiLtJ_P0068812 protein_coding protein_coding MGP_NODShiLtJ_T0004431.1 MGP_NODShiLtJ_G0003852.1 mouse_genomes_project 4 113479795 113484350 - Ube2uos antisense antisense MGP_NODShiLtJ_T0017901.1 MGP_NODShiLtJ_G0015414.1 mouse_genomes_project 4 58375665 58392631 + 4930552N02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0014298.1 MGP_NODShiLtJ_G0012406.1 mouse_genomes_project 4 13688161 13688485 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066791.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130028704 130198350 - MGP_NODShiLtJ_P0066791 Mast2 protein_coding protein_coding MGP_NODShiLtJ_T0066792.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130028705 130198743 - MGP_NODShiLtJ_P0066792 Mast2 protein_coding protein_coding MGP_NODShiLtJ_T0066793.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130028705 130198743 - MGP_NODShiLtJ_P0066793 Mast2 protein_coding protein_coding MGP_NODShiLtJ_T0066794.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130028757 130198514 - MGP_NODShiLtJ_P0066794 Mast2 protein_coding protein_coding MGP_NODShiLtJ_T0066795.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130029950 130031148 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0066796.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130031522 130032744 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0066797.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130031554 130032591 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0066798.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130034233 130038019 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0066799.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130034795 130039703 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0066800.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130039662 130049757 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0066801.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130041791 130052639 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0066802.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130044376 130138013 - MGP_NODShiLtJ_P0066802 Mast2 protein_coding protein_coding MGP_NODShiLtJ_T0066803.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130049577 130138029 - MGP_NODShiLtJ_P0066803 Mast2 protein_coding protein_coding MGP_NODShiLtJ_T0066804.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130054885 130138834 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0066805.1 MGP_NODShiLtJ_G0028430.1 mouse_genomes_project 4 130055174 130168355 - Mast2 protein_coding processed_transcript MGP_NODShiLtJ_T0068753.1 MGP_NODShiLtJ_G0028878.1 mouse_genomes_project 4 160059344 160065850 + MGP_NODShiLtJ_P0068753 protein_coding protein_coding MGP_NODShiLtJ_T0065280.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51793206 51914634 + MGP_NODShiLtJ_P0065280 Col15a1 protein_coding protein_coding MGP_NODShiLtJ_T0065281.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51793206 51914638 + MGP_NODShiLtJ_P0065281 Col15a1 protein_coding protein_coding MGP_NODShiLtJ_T0065282.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51829809 51842055 + Col15a1 protein_coding processed_transcript MGP_NODShiLtJ_T0065283.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51860346 51863733 + Col15a1 protein_coding processed_transcript MGP_NODShiLtJ_T0065284.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51860667 51863922 + Col15a1 protein_coding processed_transcript MGP_NODShiLtJ_T0065285.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51889422 51894588 + MGP_NODShiLtJ_P0065285 Col15a1 protein_coding protein_coding MGP_NODShiLtJ_T0065286.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51889434 51914638 + MGP_NODShiLtJ_P0065286 Col15a1 protein_coding protein_coding MGP_NODShiLtJ_T0065287.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51889652 51900580 + MGP_NODShiLtJ_P0065287 Col15a1 protein_coding protein_coding MGP_NODShiLtJ_T0065288.1 MGP_NODShiLtJ_G0028073.1 mouse_genomes_project 4 51904997 51914633 + MGP_NODShiLtJ_P0065288 Col15a1 protein_coding protein_coding MGP_NODShiLtJ_T0014495.1 MGP_NODShiLtJ_G0012603.1 mouse_genomes_project 4 87704095 87705037 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068359.1 MGP_NODShiLtJ_G0028778.1 mouse_genomes_project 4 152590381 152593652 - MGP_NODShiLtJ_P0068359 C1qc protein_coding protein_coding MGP_NODShiLtJ_T0068360.1 MGP_NODShiLtJ_G0028778.1 mouse_genomes_project 4 152592238 152593463 - C1qc protein_coding processed_transcript MGP_NODShiLtJ_T0066571.1 MGP_NODShiLtJ_G0028377.1 mouse_genomes_project 4 123070914 123093539 + MGP_NODShiLtJ_P0066571 Ttc39a protein_coding protein_coding MGP_NODShiLtJ_T0066572.1 MGP_NODShiLtJ_G0028377.1 mouse_genomes_project 4 123071378 123109916 + MGP_NODShiLtJ_P0066572 Ttc39a protein_coding protein_coding MGP_NODShiLtJ_T0066573.1 MGP_NODShiLtJ_G0028377.1 mouse_genomes_project 4 123071401 123089643 + MGP_NODShiLtJ_P0066573 Ttc39a protein_coding protein_coding MGP_NODShiLtJ_T0066574.1 MGP_NODShiLtJ_G0028377.1 mouse_genomes_project 4 123071420 123088347 + Ttc39a protein_coding processed_transcript MGP_NODShiLtJ_T0066575.1 MGP_NODShiLtJ_G0028377.1 mouse_genomes_project 4 123079088 123093607 + MGP_NODShiLtJ_P0066575 Ttc39a protein_coding protein_coding MGP_NODShiLtJ_T0066576.1 MGP_NODShiLtJ_G0028377.1 mouse_genomes_project 4 123079960 123109553 + MGP_NODShiLtJ_P0066576 Ttc39a protein_coding protein_coding MGP_NODShiLtJ_T0066577.1 MGP_NODShiLtJ_G0028377.1 mouse_genomes_project 4 123080086 123086782 + Ttc39a protein_coding processed_transcript MGP_NODShiLtJ_T0066578.1 MGP_NODShiLtJ_G0028377.1 mouse_genomes_project 4 123086346 123091770 + MGP_NODShiLtJ_P0066578 Ttc39a protein_coding protein_coding MGP_NODShiLtJ_T0067581.1 MGP_NODShiLtJ_G0028616.1 mouse_genomes_project 4 144147180 144153294 + MGP_NODShiLtJ_P0067581 Tmem54 protein_coding protein_coding MGP_NODShiLtJ_T0067582.1 MGP_NODShiLtJ_G0028616.1 mouse_genomes_project 4 144147206 144153294 + MGP_NODShiLtJ_P0067582 Tmem54 protein_coding protein_coding MGP_NODShiLtJ_T0067583.1 MGP_NODShiLtJ_G0028616.1 mouse_genomes_project 4 144147233 144153185 + MGP_NODShiLtJ_P0067583 Tmem54 protein_coding protein_coding MGP_NODShiLtJ_T0067584.1 MGP_NODShiLtJ_G0028616.1 mouse_genomes_project 4 144148501 144152212 + MGP_NODShiLtJ_P0067584 Tmem54 protein_coding protein_coding MGP_NODShiLtJ_T0014441.1 MGP_NODShiLtJ_G0012549.1 mouse_genomes_project 4 61180696 61181048 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068114.1 MGP_NODShiLtJ_G0028719.1 mouse_genomes_project 4 149691951 149710421 - MGP_NODShiLtJ_P0068114 Catsper4 protein_coding protein_coding MGP_NODShiLtJ_T0068115.1 MGP_NODShiLtJ_G0028719.1 mouse_genomes_project 4 149691951 149710421 - MGP_NODShiLtJ_P0068115 Catsper4 protein_coding protein_coding MGP_NODShiLtJ_T0068116.1 MGP_NODShiLtJ_G0028719.1 mouse_genomes_project 4 149707851 149710410 - MGP_NODShiLtJ_P0068116 Catsper4 protein_coding protein_coding MGP_NODShiLtJ_T0068117.1 MGP_NODShiLtJ_G0028719.1 mouse_genomes_project 4 149709535 149710388 - Catsper4 protein_coding processed_transcript MGP_NODShiLtJ_T0067509.1 MGP_NODShiLtJ_G0028596.1 mouse_genomes_project 4 141966105 142017575 + MGP_NODShiLtJ_P0067509 Zmym6 protein_coding protein_coding MGP_NODShiLtJ_T0067510.1 MGP_NODShiLtJ_G0028596.1 mouse_genomes_project 4 141966119 142017577 + MGP_NODShiLtJ_P0067510 Zmym6 protein_coding protein_coding MGP_NODShiLtJ_T0067511.1 MGP_NODShiLtJ_G0028596.1 mouse_genomes_project 4 141966164 142000339 + Zmym6 protein_coding processed_transcript MGP_NODShiLtJ_T0067512.1 MGP_NODShiLtJ_G0028596.1 mouse_genomes_project 4 141967013 141977603 + Zmym6 protein_coding processed_transcript MGP_NODShiLtJ_T0067513.1 MGP_NODShiLtJ_G0028596.1 mouse_genomes_project 4 141975347 141977746 + Zmym6 protein_coding processed_transcript MGP_NODShiLtJ_T0067514.1 MGP_NODShiLtJ_G0028596.1 mouse_genomes_project 4 141994033 142000217 + Zmym6 protein_coding processed_transcript MGP_NODShiLtJ_T0007948.1 MGP_NODShiLtJ_G0006480.1 mouse_genomes_project 4 157069483 157074814 + 4930515B02Rik lincRNA lincRNA MGP_NODShiLtJ_T0004363.1 MGP_NODShiLtJ_G0003800.1 mouse_genomes_project 4 6524376 6527816 - Gm11816 antisense antisense MGP_NODShiLtJ_T0004364.1 MGP_NODShiLtJ_G0003800.1 mouse_genomes_project 4 6526274 6527758 - Gm11816 antisense antisense MGP_NODShiLtJ_T0066659.1 MGP_NODShiLtJ_G0028394.1 mouse_genomes_project 4 127874650 128091525 + MGP_NODShiLtJ_P0066659 Trabd2b protein_coding protein_coding MGP_NODShiLtJ_T0014275.1 MGP_NODShiLtJ_G0012383.1 mouse_genomes_project 4 5866473 5867423 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068133.1 MGP_NODShiLtJ_G0028723.1 mouse_genomes_project 4 149729353 149732462 + MGP_NODShiLtJ_P0068133 Gm30191 protein_coding protein_coding MGP_NODShiLtJ_T0067803.1 MGP_NODShiLtJ_G0028657.1 mouse_genomes_project 4 145684186 145821713 + MGP_NODShiLtJ_P0067803 Pum1 protein_coding protein_coding MGP_NODShiLtJ_T0067804.1 MGP_NODShiLtJ_G0028657.1 mouse_genomes_project 4 145684224 145821711 + MGP_NODShiLtJ_P0067804 Pum1 protein_coding protein_coding MGP_NODShiLtJ_T0067805.1 MGP_NODShiLtJ_G0028657.1 mouse_genomes_project 4 145684224 145821711 + MGP_NODShiLtJ_P0067805 Pum1 protein_coding protein_coding MGP_NODShiLtJ_T0067806.1 MGP_NODShiLtJ_G0028657.1 mouse_genomes_project 4 145684231 145753903 + Pum1 protein_coding retained_intron MGP_NODShiLtJ_T0067807.1 MGP_NODShiLtJ_G0028657.1 mouse_genomes_project 4 145684232 145782045 + MGP_NODShiLtJ_P0067807 Pum1 protein_coding protein_coding MGP_NODShiLtJ_T0067808.1 MGP_NODShiLtJ_G0028657.1 mouse_genomes_project 4 145684251 145820415 + MGP_NODShiLtJ_P0067808 Pum1 protein_coding protein_coding MGP_NODShiLtJ_T0067809.1 MGP_NODShiLtJ_G0028657.1 mouse_genomes_project 4 145684271 145820403 + MGP_NODShiLtJ_P0067809 Pum1 protein_coding protein_coding MGP_NODShiLtJ_T0007859.1 MGP_NODShiLtJ_G0006418.1 mouse_genomes_project 4 121285838 121293514 + 4933424M12Rik lincRNA lincRNA MGP_NODShiLtJ_T0007860.1 MGP_NODShiLtJ_G0006418.1 mouse_genomes_project 4 121289940 121293514 + 4933424M12Rik lincRNA lincRNA MGP_NODShiLtJ_T0065372.1 MGP_NODShiLtJ_G0028098.1 mouse_genomes_project 4 58116457 58134807 + MGP_NODShiLtJ_P0065372 Toporsl protein_coding protein_coding MGP_NODShiLtJ_T0065373.1 MGP_NODShiLtJ_G0028098.1 mouse_genomes_project 4 58129594 58134804 + MGP_NODShiLtJ_P0065373 Toporsl protein_coding protein_coding MGP_NODShiLtJ_T0068994.1 MGP_NODShiLtJ_G0028945.1 mouse_genomes_project 4 166771335 166774366 + MGP_NODShiLtJ_P0068994 Lzic protein_coding protein_coding MGP_NODShiLtJ_T0068995.1 MGP_NODShiLtJ_G0028945.1 mouse_genomes_project 4 166771337 166774394 + MGP_NODShiLtJ_P0068995 Lzic protein_coding protein_coding MGP_NODShiLtJ_T0068996.1 MGP_NODShiLtJ_G0028945.1 mouse_genomes_project 4 166771346 166771847 + Lzic protein_coding processed_transcript MGP_NODShiLtJ_T0068997.1 MGP_NODShiLtJ_G0028945.1 mouse_genomes_project 4 166771400 166783757 + MGP_NODShiLtJ_P0068997 Lzic protein_coding protein_coding MGP_NODShiLtJ_T0068998.1 MGP_NODShiLtJ_G0028945.1 mouse_genomes_project 4 166771439 166772109 + Lzic protein_coding processed_transcript MGP_NODShiLtJ_T0014678.1 MGP_NODShiLtJ_G0012786.1 mouse_genomes_project 4 151701014 151701474 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068076.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149512989 149544283 + MGP_NODShiLtJ_P0068076 Aim1l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068077.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149518002 149524808 + MGP_NODShiLtJ_P0068077 Aim1l protein_coding protein_coding MGP_NODShiLtJ_T0068078.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149520486 149544380 + MGP_NODShiLtJ_P0068078 Aim1l protein_coding protein_coding MGP_NODShiLtJ_T0068079.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149530921 149534770 + Aim1l protein_coding processed_transcript MGP_NODShiLtJ_T0068080.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149531002 149539385 + MGP_NODShiLtJ_P0068080 Aim1l protein_coding protein_coding MGP_NODShiLtJ_T0068081.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149534395 149542975 + Aim1l protein_coding retained_intron MGP_NODShiLtJ_T0068082.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149534395 149544377 + Aim1l protein_coding retained_intron MGP_NODShiLtJ_T0068083.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149534398 149541382 + Aim1l protein_coding retained_intron MGP_NODShiLtJ_T0068084.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149534433 149540946 + Aim1l protein_coding retained_intron MGP_NODShiLtJ_T0068085.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149534519 149534972 + Aim1l protein_coding retained_intron MGP_NODShiLtJ_T0068087.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149542694 149544262 + Aim1l protein_coding retained_intron MGP_NODShiLtJ_T0068088.1 MGP_NODShiLtJ_G0028713.1 mouse_genomes_project 4 149543028 149544372 + Aim1l protein_coding processed_transcript MGP_NODShiLtJ_T0068482.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154771964 154793039 - MGP_NODShiLtJ_P0068482 Pla2g5 protein_coding protein_coding MGP_NODShiLtJ_T0068483.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154771964 154793032 - MGP_NODShiLtJ_P0068483 Pla2g5 protein_coding protein_coding MGP_NODShiLtJ_T0068484.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154771969 154840388 - MGP_NODShiLtJ_P0068484 Pla2g5 protein_coding protein_coding MGP_NODShiLtJ_T0068485.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154773072 154785942 - MGP_NODShiLtJ_P0068485 Pla2g5 protein_coding protein_coding MGP_NODShiLtJ_T0068486.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154773284 154785988 - Pla2g5 protein_coding processed_transcript MGP_NODShiLtJ_T0068487.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154777279 154793034 - Pla2g5 protein_coding processed_transcript MGP_NODShiLtJ_T0068488.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154777293 154793005 - Pla2g5 protein_coding processed_transcript MGP_NODShiLtJ_T0068489.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154778899 154782468 - Pla2g5 protein_coding processed_transcript MGP_NODShiLtJ_T0068490.1 MGP_NODShiLtJ_G0028808.1 mouse_genomes_project 4 154834445 154840368 - Pla2g5 protein_coding processed_transcript MGP_NODShiLtJ_T0069177.1 MGP_NODShiLtJ_G0028978.1 mouse_genomes_project 4 169711006 169714609 + MGP_NODShiLtJ_P0069177 Hes2 protein_coding protein_coding MGP_NODShiLtJ_T0069178.1 MGP_NODShiLtJ_G0028978.1 mouse_genomes_project 4 169711688 169712740 + Hes2 protein_coding processed_transcript MGP_NODShiLtJ_T0069259.1 MGP_NODShiLtJ_G0028992.1 mouse_genomes_project 4 171754498 171765301 + MGP_NODShiLtJ_P0069259 Lrrc47 protein_coding protein_coding MGP_NODShiLtJ_T0069260.1 MGP_NODShiLtJ_G0028992.1 mouse_genomes_project 4 171754570 171765300 + MGP_NODShiLtJ_P0069260 Lrrc47 protein_coding protein_coding MGP_NODShiLtJ_T0069261.1 MGP_NODShiLtJ_G0028992.1 mouse_genomes_project 4 171760185 171762858 + Lrrc47 protein_coding retained_intron MGP_NODShiLtJ_T0069262.1 MGP_NODShiLtJ_G0028992.1 mouse_genomes_project 4 171762740 171764679 + MGP_NODShiLtJ_P0069262 Lrrc47 protein_coding protein_coding MGP_NODShiLtJ_T0069263.1 MGP_NODShiLtJ_G0028992.1 mouse_genomes_project 4 171763426 171764455 + MGP_NODShiLtJ_P0069263 Lrrc47 protein_coding protein_coding MGP_NODShiLtJ_T0014581.1 MGP_NODShiLtJ_G0012689.1 mouse_genomes_project 4 122057361 122057743 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004508.1 MGP_NODShiLtJ_G0003913.1 mouse_genomes_project 4 156251539 156253300 + Gm13029 antisense antisense MGP_NODShiLtJ_T0068351.1 MGP_NODShiLtJ_G0028775.1 mouse_genomes_project 4 152301289 152321813 + MGP_NODShiLtJ_P0068351 Lactbl1 protein_coding protein_coding MGP_NODShiLtJ_T0065883.1 MGP_NODShiLtJ_G0028225.1 mouse_genomes_project 4 97793879 97843362 + MGP_NODShiLtJ_P0065883 Acer2 protein_coding protein_coding MGP_NODShiLtJ_T0065884.1 MGP_NODShiLtJ_G0028225.1 mouse_genomes_project 4 97793897 97857488 + Acer2 protein_coding processed_transcript MGP_NODShiLtJ_T0065885.1 MGP_NODShiLtJ_G0028225.1 mouse_genomes_project 4 97793897 97843362 + MGP_NODShiLtJ_P0065885 Acer2 protein_coding protein_coding MGP_NODShiLtJ_T0065886.1 MGP_NODShiLtJ_G0028225.1 mouse_genomes_project 4 97855733 97859819 + Acer2 protein_coding processed_transcript MGP_NODShiLtJ_T0068450.1 MGP_NODShiLtJ_G0028796.1 mouse_genomes_project 4 154149670 154214700 + MGP_NODShiLtJ_P0068450 Kif17 protein_coding protein_coding MGP_NODShiLtJ_T0068453.1 MGP_NODShiLtJ_G0028796.1 mouse_genomes_project 4 154161495 154214225 + MGP_NODShiLtJ_P0068453 Kif17 protein_coding protein_coding MGP_NODShiLtJ_T0068454.1 MGP_NODShiLtJ_G0028796.1 mouse_genomes_project 4 154161735 154214115 + MGP_NODShiLtJ_P0068454 Kif17 protein_coding protein_coding MGP_NODShiLtJ_T0068455.1 MGP_NODShiLtJ_G0028796.1 mouse_genomes_project 4 154161762 154187651 + Kif17 protein_coding retained_intron MGP_NODShiLtJ_T0014521.1 MGP_NODShiLtJ_G0012629.1 mouse_genomes_project 4 100634580 100637011 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066925.1 MGP_NODShiLtJ_G0028454.1 mouse_genomes_project 4 131043512 131087707 - MGP_NODShiLtJ_P0066925 Gm1661 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0066926.1 MGP_NODShiLtJ_G0028454.1 mouse_genomes_project 4 131045391 131087763 - MGP_NODShiLtJ_P0066926 Gm1661 protein_coding protein_coding MGP_NODShiLtJ_T0066927.1 MGP_NODShiLtJ_G0028454.1 mouse_genomes_project 4 131078605 131087971 - Gm1661 protein_coding processed_transcript MGP_NODShiLtJ_T0098201.1 MGP_NODShiLtJ_G0036613.1 mouse_genomes_project 4 148083082 148083247 - Gm22767 scaRNA scaRNA MGP_NODShiLtJ_T0066885.1 MGP_NODShiLtJ_G0028447.1 mouse_genomes_project 4 130816402 130876175 + MGP_NODShiLtJ_P0066885 Eif2b3 protein_coding protein_coding MGP_NODShiLtJ_T0066886.1 MGP_NODShiLtJ_G0028447.1 mouse_genomes_project 4 130816407 130891978 + MGP_NODShiLtJ_P0066886 Eif2b3 protein_coding protein_coding MGP_NODShiLtJ_T0066887.1 MGP_NODShiLtJ_G0028447.1 mouse_genomes_project 4 130840804 130861309 + Eif2b3 protein_coding processed_transcript MGP_NODShiLtJ_T0066888.1 MGP_NODShiLtJ_G0028447.1 mouse_genomes_project 4 130869384 130877215 + Eif2b3 protein_coding processed_transcript MGP_NODShiLtJ_T0066889.1 MGP_NODShiLtJ_G0028447.1 mouse_genomes_project 4 130870376 130890985 + Eif2b3 protein_coding processed_transcript MGP_NODShiLtJ_T0066890.1 MGP_NODShiLtJ_G0028447.1 mouse_genomes_project 4 130884195 130890527 + Eif2b3 protein_coding processed_transcript MGP_NODShiLtJ_T0010510.1 MGP_NODShiLtJ_G0008643.1 mouse_genomes_project 4 132107516 132107576 - Mir7226 miRNA miRNA MGP_NODShiLtJ_T0067116.1 MGP_NODShiLtJ_G0028501.1 mouse_genomes_project 4 133286500 133303783 - MGP_NODShiLtJ_P0067116 Ybx1 protein_coding protein_coding MGP_NODShiLtJ_T0067117.1 MGP_NODShiLtJ_G0028501.1 mouse_genomes_project 4 133286509 133291205 - MGP_NODShiLtJ_P0067117 Ybx1 protein_coding protein_coding MGP_NODShiLtJ_T0067118.1 MGP_NODShiLtJ_G0028501.1 mouse_genomes_project 4 133286686 133287970 - Ybx1 protein_coding processed_transcript MGP_NODShiLtJ_T0067119.1 MGP_NODShiLtJ_G0028501.1 mouse_genomes_project 4 133289555 133290599 - Ybx1 protein_coding processed_transcript MGP_NODShiLtJ_T0004400.1 MGP_NODShiLtJ_G0003831.1 mouse_genomes_project 4 59181588 59183303 - 1700060J05Rik antisense antisense MGP_NODShiLtJ_T0066012.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108487947 108545850 + MGP_NODShiLtJ_P0066012 Hook1 protein_coding protein_coding MGP_NODShiLtJ_T0066013.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108487963 108535805 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0066014.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108487969 108519179 + MGP_NODShiLtJ_P0066014 Hook1 protein_coding protein_coding MGP_NODShiLtJ_T0066015.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108494986 108543681 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0066016.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108521993 108529034 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0066017.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108523167 108529589 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0066018.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108523859 108543823 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0066019.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108532944 108540966 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0066020.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108537522 108539016 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0066021.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108541349 108543570 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0066022.1 MGP_NODShiLtJ_G0028266.1 mouse_genomes_project 4 108542579 108556442 + Hook1 protein_coding processed_transcript MGP_NODShiLtJ_T0007806.1 MGP_NODShiLtJ_G0006377.1 mouse_genomes_project 4 78806756 78864515 - Gm11228 lincRNA lincRNA MGP_NODShiLtJ_T0000339.1 MGP_NODShiLtJ_G0000277.1 mouse_genomes_project 4 90148344 90148407 + mt-Tt Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0067564.1 MGP_NODShiLtJ_G0028613.1 mouse_genomes_project 4 143949523 143982719 - MGP_NODShiLtJ_P0067564 Azin2 protein_coding protein_coding MGP_NODShiLtJ_T0067565.1 MGP_NODShiLtJ_G0028613.1 mouse_genomes_project 4 143951307 143982727 - MGP_NODShiLtJ_P0067565 Azin2 protein_coding protein_coding MGP_NODShiLtJ_T0067566.1 MGP_NODShiLtJ_G0028613.1 mouse_genomes_project 4 143951307 143982738 - MGP_NODShiLtJ_P0067566 Azin2 protein_coding protein_coding MGP_NODShiLtJ_T0067567.1 MGP_NODShiLtJ_G0028613.1 mouse_genomes_project 4 143965006 143982738 - Azin2 protein_coding retained_intron MGP_NODShiLtJ_T0067568.1 MGP_NODShiLtJ_G0028613.1 mouse_genomes_project 4 143965448 143981697 - MGP_NODShiLtJ_P0067568 Azin2 protein_coding protein_coding MGP_NODShiLtJ_T0067569.1 MGP_NODShiLtJ_G0028613.1 mouse_genomes_project 4 143966546 143982741 - Azin2 protein_coding retained_intron MGP_NODShiLtJ_T0067570.1 MGP_NODShiLtJ_G0028613.1 mouse_genomes_project 4 143981003 143982727 - Azin2 protein_coding retained_intron MGP_NODShiLtJ_T0067522.1 MGP_NODShiLtJ_G0028600.1 mouse_genomes_project 4 142217664 142220287 - MGP_NODShiLtJ_P0067522 Gja4 protein_coding protein_coding MGP_NODShiLtJ_T0068435.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154111231 154142717 + MGP_NODShiLtJ_P0068435 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068436.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154111535 154116593 + Hp1bp3 protein_coding processed_transcript MGP_NODShiLtJ_T0068437.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154111557 154142720 + MGP_NODShiLtJ_P0068437 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068438.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154111561 154122382 + MGP_NODShiLtJ_P0068438 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068439.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154111562 154141182 + MGP_NODShiLtJ_P0068439 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068440.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154111569 154125136 + MGP_NODShiLtJ_P0068440 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068441.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154111570 154142717 + MGP_NODShiLtJ_P0068441 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068442.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154112062 154126120 + MGP_NODShiLtJ_P0068442 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068443.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154112203 154126107 + Hp1bp3 protein_coding retained_intron MGP_NODShiLtJ_T0068444.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154112229 154118486 + MGP_NODShiLtJ_P0068444 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068445.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154124943 154138769 + MGP_NODShiLtJ_P0068445 Hp1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0068446.1 MGP_NODShiLtJ_G0028794.1 mouse_genomes_project 4 154126019 154132578 + Hp1bp3 protein_coding processed_transcript MGP_NODShiLtJ_T0067063.1 MGP_NODShiLtJ_G0028481.1 mouse_genomes_project 4 132585920 132586868 + MGP_NODShiLtJ_P0067063 Olfr62 protein_coding protein_coding MGP_NODShiLtJ_T0004383.1 MGP_NODShiLtJ_G0003817.1 mouse_genomes_project 4 45754517 45755410 + Gm12405 antisense antisense MGP_NODShiLtJ_T0007906.1 MGP_NODShiLtJ_G0006450.1 mouse_genomes_project 4 145813039 145819395 - Gm26516 lincRNA lincRNA MGP_NODShiLtJ_T0067825.1 MGP_NODShiLtJ_G0028660.1 mouse_genomes_project 4 146000409 146009828 + MGP_NODShiLtJ_P0067825 Matn1 protein_coding protein_coding MGP_NODShiLtJ_T0066588.1 MGP_NODShiLtJ_G0028382.1 mouse_genomes_project 4 123749537 123755168 + MGP_NODShiLtJ_P0066588 Dmrta2 protein_coding protein_coding MGP_NODShiLtJ_T0010494.1 MGP_NODShiLtJ_G0008627.1 mouse_genomes_project 4 69735269 69735351 + Mir455 miRNA miRNA MGP_NODShiLtJ_T0064486.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287914 21325148 + MGP_NODShiLtJ_P0064486 Ccnc protein_coding protein_coding MGP_NODShiLtJ_T0064487.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287939 21325148 + MGP_NODShiLtJ_P0064487 Ccnc protein_coding protein_coding MGP_NODShiLtJ_T0064488.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287939 21335242 + MGP_NODShiLtJ_P0064488 Ccnc protein_coding protein_coding MGP_NODShiLtJ_T0064489.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287946 21321342 + MGP_NODShiLtJ_P0064489 Ccnc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064490.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287954 21311518 + Ccnc protein_coding processed_transcript MGP_NODShiLtJ_T0064491.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287966 21321770 + Ccnc protein_coding processed_transcript MGP_NODShiLtJ_T0064492.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287968 21321770 + MGP_NODShiLtJ_P0064492 Ccnc protein_coding protein_coding MGP_NODShiLtJ_T0064493.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287971 21291986 + Ccnc protein_coding processed_transcript MGP_NODShiLtJ_T0064494.1 MGP_NODShiLtJ_G0027904.1 mouse_genomes_project 4 21287980 21322362 + Ccnc protein_coding processed_transcript MGP_NODShiLtJ_T0064432.1 MGP_NODShiLtJ_G0027881.1 mouse_genomes_project 4 12547036 12726265 - MGP_NODShiLtJ_P0064432 Lrrc69 protein_coding protein_coding MGP_NODShiLtJ_T0064433.1 MGP_NODShiLtJ_G0027881.1 mouse_genomes_project 4 12586122 12687745 - Lrrc69 protein_coding processed_transcript MGP_NODShiLtJ_T0064434.1 MGP_NODShiLtJ_G0027881.1 mouse_genomes_project 4 12586122 12726257 - MGP_NODShiLtJ_P0064434 Lrrc69 protein_coding protein_coding MGP_NODShiLtJ_T0064457.1 MGP_NODShiLtJ_G0027891.1 mouse_genomes_project 4 16474451 16886020 + MGP_NODShiLtJ_P0064457 Mmp16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0064458.1 MGP_NODShiLtJ_G0027891.1 mouse_genomes_project 4 16474649 16694350 + MGP_NODShiLtJ_P0064458 Mmp16 protein_coding protein_coding MGP_NODShiLtJ_T0064459.1 MGP_NODShiLtJ_G0027891.1 mouse_genomes_project 4 16475002 16887707 + MGP_NODShiLtJ_P0064459 Mmp16 protein_coding protein_coding MGP_NODShiLtJ_T0064460.1 MGP_NODShiLtJ_G0027891.1 mouse_genomes_project 4 16475137 16782803 + Mmp16 protein_coding retained_intron MGP_NODShiLtJ_T0064461.1 MGP_NODShiLtJ_G0027891.1 mouse_genomes_project 4 16779870 16858368 + Mmp16 protein_coding retained_intron MGP_NODShiLtJ_T0069040.1 MGP_NODShiLtJ_G0028953.1 mouse_genomes_project 4 167430896 167449439 + MGP_NODShiLtJ_P0069040 Gpr157 protein_coding protein_coding MGP_NODShiLtJ_T0066693.1 MGP_NODShiLtJ_G0028409.1 mouse_genomes_project 4 129124100 129144802 + MGP_NODShiLtJ_P0066693 protein_coding protein_coding MGP_NODShiLtJ_T0066694.1 MGP_NODShiLtJ_G0028409.1 mouse_genomes_project 4 129124124 129144799 + MGP_NODShiLtJ_P0066694 protein_coding protein_coding MGP_NODShiLtJ_T0066697.1 MGP_NODShiLtJ_G0028409.1 mouse_genomes_project 4 129124158 129138770 + MGP_NODShiLtJ_P0066697 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067532.1 MGP_NODShiLtJ_G0028606.1 mouse_genomes_project 4 143242666 143243412 - MGP_NODShiLtJ_P0067532 Hmgb4 protein_coding protein_coding MGP_NODShiLtJ_T0067467.1 MGP_NODShiLtJ_G0028588.1 mouse_genomes_project 4 141438759 141443469 + MGP_NODShiLtJ_P0067467 5730409E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0067468.1 MGP_NODShiLtJ_G0028588.1 mouse_genomes_project 4 141438795 141443469 + MGP_NODShiLtJ_P0067468 5730409E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0001374.1 MGP_NODShiLtJ_G0001294.1 mouse_genomes_project 4 3347879 3348154 + TEC TEC MGP_NODShiLtJ_T0065158.1 MGP_NODShiLtJ_G0028043.1 mouse_genomes_project 4 49372512 49397989 - MGP_NODShiLtJ_P0065158 Zbtb5 protein_coding protein_coding MGP_NODShiLtJ_T0065159.1 MGP_NODShiLtJ_G0028043.1 mouse_genomes_project 4 49372515 49398007 - MGP_NODShiLtJ_P0065159 Zbtb5 protein_coding protein_coding MGP_NODShiLtJ_T0065160.1 MGP_NODShiLtJ_G0028043.1 mouse_genomes_project 4 49378084 49397740 - MGP_NODShiLtJ_P0065160 Zbtb5 protein_coding protein_coding MGP_NODShiLtJ_T0068188.1 MGP_NODShiLtJ_G0028739.1 mouse_genomes_project 4 150408766 150440535 + MGP_NODShiLtJ_P0068188 Rhd protein_coding protein_coding MGP_NODShiLtJ_T0068189.1 MGP_NODShiLtJ_G0028739.1 mouse_genomes_project 4 150424483 150434673 + Rhd protein_coding retained_intron MGP_NODShiLtJ_T0100589.1 MGP_NODShiLtJ_G0038983.1 mouse_genomes_project 4 147468343 147468472 + Snora44 snoRNA snoRNA MGP_NODShiLtJ_T0099246.1 MGP_NODShiLtJ_G0037640.1 mouse_genomes_project 4 16074223 16074326 - Gm23384 snRNA snRNA MGP_NODShiLtJ_T0069096.1 MGP_NODShiLtJ_G0028964.1 mouse_genomes_project 4 168476780 168482617 + MGP_NODShiLtJ_P0069096 Uts2 protein_coding protein_coding MGP_NODShiLtJ_T0100563.1 MGP_NODShiLtJ_G0038957.1 mouse_genomes_project 4 106487818 106487947 + Gm23836 snoRNA snoRNA MGP_NODShiLtJ_T0067069.1 MGP_NODShiLtJ_G0028487.1 mouse_genomes_project 4 132737648 132738828 - MGP_NODShiLtJ_P0067069 Olfr1335 protein_coding protein_coding MGP_NODShiLtJ_T0067071.1 MGP_NODShiLtJ_G0028487.1 mouse_genomes_project 4 132737649 132738773 - MGP_NODShiLtJ_P0067071 Olfr1335 protein_coding protein_coding MGP_NODShiLtJ_T0068113.1 MGP_NODShiLtJ_G0028718.1 mouse_genomes_project 4 149664058 149680522 - MGP_NODShiLtJ_P0068113 Gm7534 protein_coding protein_coding MGP_NODShiLtJ_T0010553.1 MGP_NODShiLtJ_G0008686.1 mouse_genomes_project 4 173944535 173944618 - Mir429 miRNA miRNA MGP_NODShiLtJ_T0064572.1 MGP_NODShiLtJ_G0027921.1 mouse_genomes_project 4 34182457 34240626 + MGP_NODShiLtJ_P0064572 Map3k7 protein_coding protein_coding MGP_NODShiLtJ_T0064573.1 MGP_NODShiLtJ_G0027921.1 mouse_genomes_project 4 34182600 34240632 + MGP_NODShiLtJ_P0064573 Map3k7 protein_coding protein_coding MGP_NODShiLtJ_T0064574.1 MGP_NODShiLtJ_G0027921.1 mouse_genomes_project 4 34195696 34205921 + Map3k7 protein_coding processed_transcript MGP_NODShiLtJ_T0064575.1 MGP_NODShiLtJ_G0027921.1 mouse_genomes_project 4 34198811 34203528 + Map3k7 protein_coding processed_transcript MGP_NODShiLtJ_T0064576.1 MGP_NODShiLtJ_G0027921.1 mouse_genomes_project 4 34200882 34209939 + Map3k7 protein_coding processed_transcript MGP_NODShiLtJ_T0064577.1 MGP_NODShiLtJ_G0027921.1 mouse_genomes_project 4 34203473 34233162 + Map3k7 protein_coding processed_transcript MGP_NODShiLtJ_T0064578.1 MGP_NODShiLtJ_G0027921.1 mouse_genomes_project 4 34209636 34236714 + Map3k7 protein_coding processed_transcript MGP_NODShiLtJ_T0064480.1 MGP_NODShiLtJ_G0027903.1 mouse_genomes_project 4 21237348 21245832 - Prdm13 protein_coding processed_transcript MGP_NODShiLtJ_T0064481.1 MGP_NODShiLtJ_G0027903.1 mouse_genomes_project 4 21237349 21245832 - MGP_NODShiLtJ_P0064481 Prdm13 protein_coding protein_coding MGP_NODShiLtJ_T0064482.1 MGP_NODShiLtJ_G0027903.1 mouse_genomes_project 4 21237349 21245652 - MGP_NODShiLtJ_P0064482 Prdm13 protein_coding protein_coding MGP_NODShiLtJ_T0064483.1 MGP_NODShiLtJ_G0027903.1 mouse_genomes_project 4 21239533 21245652 - Prdm13 protein_coding processed_transcript MGP_NODShiLtJ_T0064484.1 MGP_NODShiLtJ_G0027903.1 mouse_genomes_project 4 21239615 21245650 - Prdm13 protein_coding processed_transcript MGP_NODShiLtJ_T0064485.1 MGP_NODShiLtJ_G0027903.1 mouse_genomes_project 4 21242163 21245714 - Prdm13 protein_coding retained_intron MGP_NODShiLtJ_T0066298.1 MGP_NODShiLtJ_G0028334.1 mouse_genomes_project 4 120175404 120236889 - MGP_NODShiLtJ_P0066298 Acot11 protein_coding protein_coding MGP_NODShiLtJ_T0066299.1 MGP_NODShiLtJ_G0028334.1 mouse_genomes_project 4 120175420 120236757 - MGP_NODShiLtJ_P0066299 Acot11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0066300.1 MGP_NODShiLtJ_G0028334.1 mouse_genomes_project 4 120178043 120242047 - MGP_NODShiLtJ_P0066300 Acot11 protein_coding protein_coding MGP_NODShiLtJ_T0066301.1 MGP_NODShiLtJ_G0028334.1 mouse_genomes_project 4 120178199 120207424 - MGP_NODShiLtJ_P0066301 Acot11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066302.1 MGP_NODShiLtJ_G0028334.1 mouse_genomes_project 4 120188464 120190717 - Acot11 protein_coding processed_transcript MGP_NODShiLtJ_T0066303.1 MGP_NODShiLtJ_G0028334.1 mouse_genomes_project 4 120196553 120236886 - MGP_NODShiLtJ_P0066303 Acot11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066304.1 MGP_NODShiLtJ_G0028334.1 mouse_genomes_project 4 120197963 120236833 - MGP_NODShiLtJ_P0066304 Acot11 protein_coding protein_coding MGP_NODShiLtJ_T0066305.1 MGP_NODShiLtJ_G0028334.1 mouse_genomes_project 4 120198006 120237292 - MGP_NODShiLtJ_P0066305 Acot11 protein_coding protein_coding MGP_NODShiLtJ_T0067960.1 MGP_NODShiLtJ_G0028687.1 mouse_genomes_project 4 148151858 148180534 - MGP_NODShiLtJ_P0067960 Fam76a protein_coding protein_coding MGP_NODShiLtJ_T0067961.1 MGP_NODShiLtJ_G0028687.1 mouse_genomes_project 4 148167552 148177809 - MGP_NODShiLtJ_P0067961 Fam76a protein_coding protein_coding MGP_NODShiLtJ_T0014307.1 MGP_NODShiLtJ_G0012415.1 mouse_genomes_project 4 14512799 14514016 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0066686.1 MGP_NODShiLtJ_G0028403.1 mouse_genomes_project 4 128789773 128805546 + MGP_NODShiLtJ_P0066686 Cyp4a29 protein_coding protein_coding MGP_NODShiLtJ_T0010504.1 MGP_NODShiLtJ_G0008637.1 mouse_genomes_project 4 112600949 112601038 + Gm23366 miRNA miRNA MGP_NODShiLtJ_T0014613.1 MGP_NODShiLtJ_G0012721.1 mouse_genomes_project 4 132435053 132435645 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004429.1 MGP_NODShiLtJ_G0003850.1 mouse_genomes_project 4 112003705 112006342 + antisense antisense MGP_NODShiLtJ_T0017926.1 MGP_NODShiLtJ_G0015432.1 mouse_genomes_project 4 123237991 123340047 + Gm12811 processed_transcript processed_transcript MGP_NODShiLtJ_T0014371.1 MGP_NODShiLtJ_G0012479.1 mouse_genomes_project 4 37368364 37369032 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099293.1 MGP_NODShiLtJ_G0037687.1 mouse_genomes_project 4 130432015 130432125 + Gm25137 snRNA snRNA MGP_NODShiLtJ_T0100595.1 MGP_NODShiLtJ_G0038989.1 mouse_genomes_project 4 152730902 152731031 + Gm23834 snoRNA snoRNA MGP_NODShiLtJ_T0064315.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6694910 6726830 - Asph protein_coding processed_transcript MGP_NODShiLtJ_T0064316.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6695920 6928453 - MGP_NODShiLtJ_P0064316 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064317.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6695920 6928453 - MGP_NODShiLtJ_P0064317 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064318.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6695920 6928635 - MGP_NODShiLtJ_P0064318 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064319.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6830160 6843843 - Asph protein_coding processed_transcript MGP_NODShiLtJ_T0064320.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6830555 6928453 - MGP_NODShiLtJ_P0064320 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064321.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6830555 6902982 - MGP_NODShiLtJ_P0064321 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064322.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6830555 6928453 - MGP_NODShiLtJ_P0064322 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064323.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6830555 6902982 - MGP_NODShiLtJ_P0064323 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064324.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6830555 6902982 - MGP_NODShiLtJ_P0064324 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064325.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6854272 6898526 - Asph protein_coding processed_transcript MGP_NODShiLtJ_T0064326.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6857553 6902982 - MGP_NODShiLtJ_P0064326 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064327.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6860599 6928453 - MGP_NODShiLtJ_P0064327 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064328.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6880143 6902982 - MGP_NODShiLtJ_P0064328 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064329.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6880930 6928453 - MGP_NODShiLtJ_P0064329 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064330.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6888256 6928453 - MGP_NODShiLtJ_P0064330 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064331.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6889786 6928453 - MGP_NODShiLtJ_P0064331 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064332.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6890165 6928612 - MGP_NODShiLtJ_P0064332 Asph protein_coding protein_coding MGP_NODShiLtJ_T0064333.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6892355 6902982 - Asph protein_coding processed_transcript MGP_NODShiLtJ_T0064334.1 MGP_NODShiLtJ_G0027857.1 mouse_genomes_project 4 6927603 6928377 - Asph protein_coding processed_transcript MGP_NODShiLtJ_T0014555.1 MGP_NODShiLtJ_G0012663.1 mouse_genomes_project 4 113542755 113543212 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007861.1 MGP_NODShiLtJ_G0006419.1 mouse_genomes_project 4 121468605 121475406 + 4930407G08Rik lincRNA lincRNA MGP_NODShiLtJ_T0014680.1 MGP_NODShiLtJ_G0012788.1 mouse_genomes_project 4 152250166 152250655 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011456.1 MGP_NODShiLtJ_G0009589.1 mouse_genomes_project 4 56867165 56867434 + Gm22563 misc_RNA misc_RNA MGP_NODShiLtJ_T0066361.1 MGP_NODShiLtJ_G0028343.1 mouse_genomes_project 4 120726300 120755251 + MGP_NODShiLtJ_P0066361 Hspb11 protein_coding protein_coding MGP_NODShiLtJ_T0066362.1 MGP_NODShiLtJ_G0028343.1 mouse_genomes_project 4 120726592 120738067 + Hspb11 protein_coding processed_transcript MGP_NODShiLtJ_T0066363.1 MGP_NODShiLtJ_G0028343.1 mouse_genomes_project 4 120726597 120755352 + MGP_NODShiLtJ_P0066363 Hspb11 protein_coding protein_coding MGP_NODShiLtJ_T0066364.1 MGP_NODShiLtJ_G0028343.1 mouse_genomes_project 4 120726619 120755342 + MGP_NODShiLtJ_P0066364 Hspb11 protein_coding protein_coding MGP_NODShiLtJ_T0066365.1 MGP_NODShiLtJ_G0028343.1 mouse_genomes_project 4 120735857 120755346 + Hspb11 protein_coding processed_transcript MGP_NODShiLtJ_T0068377.1 MGP_NODShiLtJ_G0028788.1 mouse_genomes_project 4 153343735 153346698 - MGP_NODShiLtJ_P0068377 Ldlrad2 protein_coding protein_coding MGP_NODShiLtJ_T0065519.1 MGP_NODShiLtJ_G0028139.1 mouse_genomes_project 4 65103640 65110312 + MGP_NODShiLtJ_P0065519 Gng10 protein_coding protein_coding MGP_NODShiLtJ_T0065520.1 MGP_NODShiLtJ_G0028139.1 mouse_genomes_project 4 65104324 65110312 + Gng10 protein_coding processed_transcript MGP_NODShiLtJ_T0014596.1 MGP_NODShiLtJ_G0012704.1 mouse_genomes_project 4 129097095 129097572 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065271.1 MGP_NODShiLtJ_G0028070.1 mouse_genomes_project 4 51202481 51556912 - MGP_NODShiLtJ_P0065271 Gabbr2 protein_coding protein_coding MGP_NODShiLtJ_T0065272.1 MGP_NODShiLtJ_G0028070.1 mouse_genomes_project 4 51204680 51232020 - Gabbr2 protein_coding processed_transcript MGP_NODShiLtJ_T0065273.1 MGP_NODShiLtJ_G0028070.1 mouse_genomes_project 4 51220034 51271334 - MGP_NODShiLtJ_P0065273 Gabbr2 protein_coding protein_coding MGP_NODShiLtJ_T0065274.1 MGP_NODShiLtJ_G0028070.1 mouse_genomes_project 4 51351361 51417736 - Gabbr2 protein_coding processed_transcript MGP_NODShiLtJ_T0069587.1 MGP_NODShiLtJ_G0029050.1 mouse_genomes_project 4 174052904 174056701 - Agrn protein_coding retained_intron MGP_NODShiLtJ_T0069588.1 MGP_NODShiLtJ_G0029050.1 mouse_genomes_project 4 174052904 174073557 - MGP_NODShiLtJ_P0069588 Agrn protein_coding protein_coding MGP_NODShiLtJ_T0069589.1 MGP_NODShiLtJ_G0029050.1 mouse_genomes_project 4 174052904 174073557 - MGP_NODShiLtJ_P0069589 Agrn protein_coding protein_coding MGP_NODShiLtJ_T0069590.1 MGP_NODShiLtJ_G0029050.1 mouse_genomes_project 4 174052904 174073557 - MGP_NODShiLtJ_P0069590 Agrn protein_coding protein_coding MGP_NODShiLtJ_T0069591.1 MGP_NODShiLtJ_G0029050.1 mouse_genomes_project 4 174052908 174073763 - Agrn protein_coding retained_intron MGP_NODShiLtJ_T0069592.1 MGP_NODShiLtJ_G0029050.1 mouse_genomes_project 4 174053392 174085134 - MGP_NODShiLtJ_P0069592 Agrn protein_coding protein_coding MGP_NODShiLtJ_T0069593.1 MGP_NODShiLtJ_G0029050.1 mouse_genomes_project 4 174059914 174061346 - Agrn protein_coding processed_transcript MGP_NODShiLtJ_T0099278.1 MGP_NODShiLtJ_G0037672.1 mouse_genomes_project 4 108020814 108021649 + Gm25004 snRNA snRNA MGP_NODShiLtJ_T0064753.1 MGP_NODShiLtJ_G0027966.1 mouse_genomes_project 4 45022447 45079501 + MGP_NODShiLtJ_P0064753 Nfx1 protein_coding protein_coding MGP_NODShiLtJ_T0064754.1 MGP_NODShiLtJ_G0027966.1 mouse_genomes_project 4 45022447 45066139 + MGP_NODShiLtJ_P0064754 Nfx1 protein_coding protein_coding MGP_NODShiLtJ_T0064755.1 MGP_NODShiLtJ_G0027966.1 mouse_genomes_project 4 45022447 45067402 + MGP_NODShiLtJ_P0064755 Nfx1 protein_coding protein_coding MGP_NODShiLtJ_T0064756.1 MGP_NODShiLtJ_G0027966.1 mouse_genomes_project 4 45054954 45065700 + Nfx1 protein_coding processed_transcript MGP_NODShiLtJ_T0064757.1 MGP_NODShiLtJ_G0027966.1 mouse_genomes_project 4 45062737 45075826 + Nfx1 protein_coding processed_transcript MGP_NODShiLtJ_T0064758.1 MGP_NODShiLtJ_G0027966.1 mouse_genomes_project 4 45074870 45078686 + Nfx1 protein_coding processed_transcript MGP_NODShiLtJ_T0064759.1 MGP_NODShiLtJ_G0027966.1 mouse_genomes_project 4 45076711 45078048 + Nfx1 protein_coding processed_transcript MGP_NODShiLtJ_T0064603.1 MGP_NODShiLtJ_G0027926.1 mouse_genomes_project 4 35056092 35057220 + MGP_NODShiLtJ_P0064603 Lyrm2 protein_coding protein_coding MGP_NODShiLtJ_T0064604.1 MGP_NODShiLtJ_G0027926.1 mouse_genomes_project 4 35056118 35057396 + Lyrm2 protein_coding retained_intron MGP_NODShiLtJ_T0064605.1 MGP_NODShiLtJ_G0027926.1 mouse_genomes_project 4 35056121 35056812 + Lyrm2 protein_coding retained_intron MGP_NODShiLtJ_T0014541.1 MGP_NODShiLtJ_G0012649.1 mouse_genomes_project 4 108607381 108607661 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068526.1 MGP_NODShiLtJ_G0028820.1 mouse_genomes_project 4 155367696 155369865 - Mrto4 protein_coding processed_transcript MGP_NODShiLtJ_T0068527.1 MGP_NODShiLtJ_G0028820.1 mouse_genomes_project 4 155367696 155372814 - MGP_NODShiLtJ_P0068527 Mrto4 protein_coding protein_coding MGP_NODShiLtJ_T0068528.1 MGP_NODShiLtJ_G0028820.1 mouse_genomes_project 4 155367706 155372536 - MGP_NODShiLtJ_P0068528 Mrto4 protein_coding protein_coding MGP_NODShiLtJ_T0068529.1 MGP_NODShiLtJ_G0028820.1 mouse_genomes_project 4 155368423 155369883 - Mrto4 protein_coding retained_intron MGP_NODShiLtJ_T0068530.1 MGP_NODShiLtJ_G0028820.1 mouse_genomes_project 4 155368959 155372549 - MGP_NODShiLtJ_P0068530 Mrto4 protein_coding protein_coding MGP_NODShiLtJ_T0068531.1 MGP_NODShiLtJ_G0028820.1 mouse_genomes_project 4 155369021 155372771 - Mrto4 protein_coding retained_intron MGP_NODShiLtJ_T0068532.1 MGP_NODShiLtJ_G0028820.1 mouse_genomes_project 4 155370136 155372548 - Mrto4 protein_coding retained_intron MGP_NODShiLtJ_T0064560.1 MGP_NODShiLtJ_G0027919.1 mouse_genomes_project 4 26867456 26907858 - MGP_NODShiLtJ_P0064560 Manea protein_coding protein_coding MGP_NODShiLtJ_T0064561.1 MGP_NODShiLtJ_G0027919.1 mouse_genomes_project 4 26871956 26901939 - Manea protein_coding processed_transcript MGP_NODShiLtJ_T0064562.1 MGP_NODShiLtJ_G0027919.1 mouse_genomes_project 4 26901503 26907821 - Manea protein_coding processed_transcript MGP_NODShiLtJ_T0064563.1 MGP_NODShiLtJ_G0027919.1 mouse_genomes_project 4 26901794 26907858 - MGP_NODShiLtJ_P0064563 Manea protein_coding protein_coding MGP_NODShiLtJ_T0067459.1 MGP_NODShiLtJ_G0028587.1 mouse_genomes_project 4 141377056 141417323 + MGP_NODShiLtJ_P0067459 Clspn protein_coding protein_coding MGP_NODShiLtJ_T0067460.1 MGP_NODShiLtJ_G0028587.1 mouse_genomes_project 4 141377116 141380218 + MGP_NODShiLtJ_P0067460 Clspn protein_coding protein_coding MGP_NODShiLtJ_T0067461.1 MGP_NODShiLtJ_G0028587.1 mouse_genomes_project 4 141377126 141383728 + Clspn protein_coding processed_transcript MGP_NODShiLtJ_T0067462.1 MGP_NODShiLtJ_G0028587.1 mouse_genomes_project 4 141377235 141416952 + MGP_NODShiLtJ_P0067462 Clspn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0067463.1 MGP_NODShiLtJ_G0028587.1 mouse_genomes_project 4 141380209 141386164 + MGP_NODShiLtJ_P0067463 Clspn protein_coding protein_coding MGP_NODShiLtJ_T0067464.1 MGP_NODShiLtJ_G0028587.1 mouse_genomes_project 4 141386445 141397638 + MGP_NODShiLtJ_P0067464 Clspn protein_coding protein_coding MGP_NODShiLtJ_T0067465.1 MGP_NODShiLtJ_G0028587.1 mouse_genomes_project 4 141392304 141395138 + Clspn protein_coding processed_transcript MGP_NODShiLtJ_T0067466.1 MGP_NODShiLtJ_G0028587.1 mouse_genomes_project 4 141401208 141413497 + Clspn protein_coding processed_transcript MGP_NODShiLtJ_T0064341.1 MGP_NODShiLtJ_G0027860.1 mouse_genomes_project 4 8409813 8440636 - MGP_NODShiLtJ_P0064341 Plekhf2 protein_coding protein_coding MGP_NODShiLtJ_T0064342.1 MGP_NODShiLtJ_G0027860.1 mouse_genomes_project 4 8415758 8440887 - MGP_NODShiLtJ_P0064342 Plekhf2 protein_coding protein_coding MGP_NODShiLtJ_T0014352.1 MGP_NODShiLtJ_G0012460.1 mouse_genomes_project 4 30070393 30070810 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067457.1 MGP_NODShiLtJ_G0028586.1 mouse_genomes_project 4 141302543 141350836 - MGP_NODShiLtJ_P0067457 Ago4 protein_coding protein_coding MGP_NODShiLtJ_T0067458.1 MGP_NODShiLtJ_G0028586.1 mouse_genomes_project 4 141331633 141333064 - Ago4 protein_coding processed_transcript MGP_NODShiLtJ_T0014544.1 MGP_NODShiLtJ_G0012652.1 mouse_genomes_project 4 111007458 111007976 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100515.1 MGP_NODShiLtJ_G0038909.1 mouse_genomes_project 4 3633933 3634065 - Gm22473 snoRNA snoRNA MGP_NODShiLtJ_T0065076.1 MGP_NODShiLtJ_G0028030.1 mouse_genomes_project 4 48099423 48100380 - MGP_NODShiLtJ_P0065076 Olfr156 protein_coding protein_coding MGP_NODShiLtJ_T0004481.1 MGP_NODShiLtJ_G0003891.1 mouse_genomes_project 4 143243498 143245445 + Hmgb4os antisense antisense MGP_NODShiLtJ_T0067884.1 MGP_NODShiLtJ_G0028671.1 mouse_genomes_project 4 147458827 147460016 - MGP_NODShiLtJ_P0067884 Rab42 protein_coding protein_coding MGP_NODShiLtJ_T0004525.1 MGP_NODShiLtJ_G0003925.1 mouse_genomes_project 4 161106789 161108223 + Pramef12os antisense antisense MGP_NODShiLtJ_T0065944.1 MGP_NODShiLtJ_G0028252.1 mouse_genomes_project 4 100904139 100916518 + Dmrta1 protein_coding processed_transcript MGP_NODShiLtJ_T0065945.1 MGP_NODShiLtJ_G0028252.1 mouse_genomes_project 4 100912820 100919364 + MGP_NODShiLtJ_P0065945 Dmrta1 protein_coding protein_coding MGP_NODShiLtJ_T0065938.1 MGP_NODShiLtJ_G0028248.1 mouse_genomes_project 4 100003807 100004471 - MGP_NODShiLtJ_P0065938 Ifne protein_coding protein_coding MGP_NODShiLtJ_T0069602.1 MGP_NODShiLtJ_G0029057.1 mouse_genomes_project 4 174146508 174157233 - MGP_NODShiLtJ_P0069602 Samd11 protein_coding protein_coding MGP_NODShiLtJ_T0069603.1 MGP_NODShiLtJ_G0029057.1 mouse_genomes_project 4 174146966 174156406 - MGP_NODShiLtJ_P0069603 Samd11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0064854.1 MGP_NODShiLtJ_G0027994.1 mouse_genomes_project 4 46791369 46792034 + MGP_NODShiLtJ_P0064854 protein_coding protein_coding MGP_NODShiLtJ_T0004524.1 MGP_NODShiLtJ_G0003924.1 mouse_genomes_project 4 158510949 158514485 + Gm13062 antisense antisense MGP_NODShiLtJ_T0017891.1 MGP_NODShiLtJ_G0015407.1 mouse_genomes_project 4 35638806 35646599 - Gm11934 processed_transcript processed_transcript MGP_NODShiLtJ_T0097809.1 MGP_NODShiLtJ_G0036221.1 mouse_genomes_project 4 138486024 138487516 - pseudogene pseudogene MGP_NODShiLtJ_T0068647.1 MGP_NODShiLtJ_G0028848.1 mouse_genomes_project 4 157623965 157639208 + MGP_NODShiLtJ_P0068647 Fam131c protein_coding protein_coding MGP_NODShiLtJ_T0065043.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47903288 47922581 + MGP_NODShiLtJ_P0065043 Npr2 protein_coding protein_coding MGP_NODShiLtJ_T0065044.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47903538 47922581 + MGP_NODShiLtJ_P0065044 Npr2 protein_coding protein_coding MGP_NODShiLtJ_T0065045.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47912428 47922581 + Npr2 protein_coding processed_transcript MGP_NODShiLtJ_T0065046.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47912567 47914415 + Npr2 protein_coding processed_transcript MGP_NODShiLtJ_T0065047.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47912574 47915710 + MGP_NODShiLtJ_P0065047 Npr2 protein_coding protein_coding MGP_NODShiLtJ_T0065048.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47912596 47922581 + MGP_NODShiLtJ_P0065048 Npr2 protein_coding protein_coding MGP_NODShiLtJ_T0065049.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47915466 47919510 + Npr2 protein_coding processed_transcript MGP_NODShiLtJ_T0065050.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47917890 47921646 + Npr2 protein_coding processed_transcript MGP_NODShiLtJ_T0065051.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47918528 47919737 + Npr2 protein_coding processed_transcript MGP_NODShiLtJ_T0065052.1 MGP_NODShiLtJ_G0028021.1 mouse_genomes_project 4 47919336 47921567 + Npr2 protein_coding processed_transcript MGP_NODShiLtJ_T0067316.1 MGP_NODShiLtJ_G0028550.1 mouse_genomes_project 4 138509415 138530963 + MGP_NODShiLtJ_P0067316 Rragc protein_coding protein_coding MGP_NODShiLtJ_T0067317.1 MGP_NODShiLtJ_G0028550.1 mouse_genomes_project 4 138509443 138530959 + MGP_NODShiLtJ_P0067317 Rragc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0067319.1 MGP_NODShiLtJ_G0028550.1 mouse_genomes_project 4 138511051 138512956 + Rragc protein_coding processed_transcript MGP_NODShiLtJ_T0067320.1 MGP_NODShiLtJ_G0028550.1 mouse_genomes_project 4 138512871 138521911 + Rragc protein_coding retained_intron MGP_NODShiLtJ_T0067321.1 MGP_NODShiLtJ_G0028550.1 mouse_genomes_project 4 138513246 138529512 + Rragc protein_coding processed_transcript MGP_NODShiLtJ_T0001388.1 MGP_NODShiLtJ_G0001308.1 mouse_genomes_project 4 133304206 133304640 - TEC TEC MGP_NODShiLtJ_T0004554.1 MGP_NODShiLtJ_G0003948.1 mouse_genomes_project 4 172655776 172661108 - Gm13112 antisense antisense MGP_NODShiLtJ_T0004555.1 MGP_NODShiLtJ_G0003948.1 mouse_genomes_project 4 172656353 172663631 - Gm13112 antisense antisense MGP_NODShiLtJ_T0014670.1 MGP_NODShiLtJ_G0012778.1 mouse_genomes_project 4 150873798 150873988 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0068307.1 MGP_NODShiLtJ_G0028764.1 mouse_genomes_project 4 151772524 151774295 + MGP_NODShiLtJ_P0068307 Id3 protein_coding protein_coding MGP_NODShiLtJ_T0068308.1 MGP_NODShiLtJ_G0028764.1 mouse_genomes_project 4 151772890 151773747 + Id3 protein_coding retained_intron MGP_NODShiLtJ_T0068309.1 MGP_NODShiLtJ_G0028764.1 mouse_genomes_project 4 151774012 151774658 + Id3 protein_coding processed_transcript MGP_NODShiLtJ_T0065816.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94960637 95393216 - MGP_NODShiLtJ_P0065816 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065817.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94960771 95393249 - MGP_NODShiLtJ_P0065817 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065818.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94960894 95393457 - MGP_NODShiLtJ_P0065818 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065819.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94960922 94977298 - MGP_NODShiLtJ_P0065819 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065820.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94961152 95393268 - MGP_NODShiLtJ_P0065820 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065821.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94961701 94977471 - MGP_NODShiLtJ_P0065821 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065822.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94961787 94977687 - MGP_NODShiLtJ_P0065822 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065823.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94961986 94977409 - MGP_NODShiLtJ_P0065823 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065824.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94961986 94977409 - MGP_NODShiLtJ_P0065824 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065825.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94978754 95393178 - MGP_NODShiLtJ_P0065825 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065826.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94978754 95393178 - MGP_NODShiLtJ_P0065826 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065827.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94978778 95205532 - Bnc2 protein_coding processed_transcript MGP_NODShiLtJ_T0065828.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94979117 95393209 - MGP_NODShiLtJ_P0065828 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065829.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94979144 95393179 - MGP_NODShiLtJ_P0065829 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065830.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 94979175 95234793 - Bnc2 protein_coding processed_transcript MGP_NODShiLtJ_T0065831.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 95081564 95393181 - Bnc2 protein_coding retained_intron MGP_NODShiLtJ_T0065832.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 95083808 95393179 - MGP_NODShiLtJ_P0065832 Bnc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0065833.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 95083840 95248832 - Bnc2 protein_coding processed_transcript MGP_NODShiLtJ_T0065834.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 95083933 95393260 - MGP_NODShiLtJ_P0065834 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065835.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 95104031 95248503 - MGP_NODShiLtJ_P0065835 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0065836.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 95104056 95224080 - Bnc2 protein_coding processed_transcript MGP_NODShiLtJ_T0065837.1 MGP_NODShiLtJ_G0028215.1 mouse_genomes_project 4 95248424 95393181 - MGP_NODShiLtJ_P0065837 Bnc2 protein_coding protein_coding MGP_NODShiLtJ_T0014492.1 MGP_NODShiLtJ_G0012600.1 mouse_genomes_project 4 85853611 85853848 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101909.1 MGP_NODShiLtJ_G0040077.1 mouse_genomes_project 4 81653457 81658484 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014455.1 MGP_NODShiLtJ_G0012563.1 mouse_genomes_project 4 70101918 70102165 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007825.1 MGP_NODShiLtJ_G0006392.1 mouse_genomes_project 4 103223854 103228741 + Gm12670 lincRNA lincRNA MGP_NODShiLtJ_T0004401.1 MGP_NODShiLtJ_G0003832.1 mouse_genomes_project 4 63089489 63093973 + Gm12530 antisense antisense MGP_NODShiLtJ_T0066872.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130785270 130790730 - MGP_NODShiLtJ_P0066872 Urod protein_coding protein_coding MGP_NODShiLtJ_T0066873.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130786533 130787982 - Urod protein_coding retained_intron MGP_NODShiLtJ_T0066874.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130786601 130788203 - Urod protein_coding retained_intron MGP_NODShiLtJ_T0066875.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130787392 130790681 - Urod protein_coding retained_intron MGP_NODShiLtJ_T0066876.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130787777 130790674 - MGP_NODShiLtJ_P0066876 Urod protein_coding protein_coding MGP_NODShiLtJ_T0066877.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130788600 130790663 - Urod protein_coding retained_intron MGP_NODShiLtJ_T0066878.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130789100 130790662 - Urod protein_coding retained_intron MGP_NODShiLtJ_T0066879.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130789269 130789914 - Urod protein_coding processed_transcript MGP_NODShiLtJ_T0066880.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130789424 130790657 - Urod protein_coding retained_intron MGP_NODShiLtJ_T0066881.1 MGP_NODShiLtJ_G0028445.1 mouse_genomes_project 4 130789596 130790697 - Urod protein_coding retained_intron MGP_NODShiLtJ_T0098029.1 MGP_NODShiLtJ_G0036441.1 mouse_genomes_project 4 10475188 10475295 + n-R5s182 rRNA rRNA MGP_NODShiLtJ_T0068937.1 MGP_NODShiLtJ_G0028935.1 mouse_genomes_project 4 166006074 166154120 + MGP_NODShiLtJ_P0068937 Casz1 protein_coding protein_coding MGP_NODShiLtJ_T0068938.1 MGP_NODShiLtJ_G0028935.1 mouse_genomes_project 4 166006074 166163657 + MGP_NODShiLtJ_P0068938 Casz1 protein_coding protein_coding MGP_NODShiLtJ_T0068939.1 MGP_NODShiLtJ_G0028935.1 mouse_genomes_project 4 166006110 166045124 + Casz1 protein_coding processed_transcript MGP_NODShiLtJ_T0068940.1 MGP_NODShiLtJ_G0028935.1 mouse_genomes_project 4 166098551 166101104 + Casz1 protein_coding processed_transcript MGP_NODShiLtJ_T0068941.1 MGP_NODShiLtJ_G0028935.1 mouse_genomes_project 4 166110266 166141892 + MGP_NODShiLtJ_P0068941 Casz1 protein_coding protein_coding MGP_NODShiLtJ_T0068942.1 MGP_NODShiLtJ_G0028935.1 mouse_genomes_project 4 166142109 166149504 + MGP_NODShiLtJ_P0068942 Casz1 protein_coding protein_coding MGP_NODShiLtJ_T0068501.1 MGP_NODShiLtJ_G0028814.1 mouse_genomes_project 4 155040817 155055233 - MGP_NODShiLtJ_P0068501 Htr6 protein_coding protein_coding MGP_NODShiLtJ_T0068502.1 MGP_NODShiLtJ_G0028814.1 mouse_genomes_project 4 155041118 155054452 - MGP_NODShiLtJ_P0068502 Htr6 protein_coding protein_coding MGP_NODShiLtJ_T0099320.1 MGP_NODShiLtJ_G0037714.1 mouse_genomes_project 4 157115460 157115576 + Gm26226 snRNA snRNA MGP_NODShiLtJ_T0007934.1 MGP_NODShiLtJ_G0006467.1 mouse_genomes_project 4 152827436 152828310 - 1700037C06Rik lincRNA lincRNA MGP_NODShiLtJ_T0068123.1 MGP_NODShiLtJ_G0028721.1 mouse_genomes_project 4 149725703 149728010 - MGP_NODShiLtJ_P0068123 Zfp593 protein_coding protein_coding MGP_NODShiLtJ_T0068124.1 MGP_NODShiLtJ_G0028721.1 mouse_genomes_project 4 149725721 149727960 - Zfp593 protein_coding processed_transcript MGP_NODShiLtJ_T0007942.1 MGP_NODShiLtJ_G0006475.1 mouse_genomes_project 4 155997187 156015834 - 4933427I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0007943.1 MGP_NODShiLtJ_G0006475.1 mouse_genomes_project 4 155997759 156005454 - 4933427I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0067252.1 MGP_NODShiLtJ_G0028536.1 mouse_genomes_project 4 137434104 137435192 + MGP_NODShiLtJ_P0067252 Mycl protein_coding protein_coding MGP_NODShiLtJ_T0067253.1 MGP_NODShiLtJ_G0028536.1 mouse_genomes_project 4 137434396 137440936 + MGP_NODShiLtJ_P0067253 Mycl protein_coding protein_coding MGP_NODShiLtJ_T0067254.1 MGP_NODShiLtJ_G0028536.1 mouse_genomes_project 4 137434551 137440936 + MGP_NODShiLtJ_P0067254 Mycl protein_coding protein_coding MGP_NODShiLtJ_T0067255.1 MGP_NODShiLtJ_G0028536.1 mouse_genomes_project 4 137437330 137438918 + Mycl protein_coding processed_transcript MGP_NODShiLtJ_T0067256.1 MGP_NODShiLtJ_G0028536.1 mouse_genomes_project 4 137437789 137438968 + Mycl protein_coding processed_transcript MGP_NODShiLtJ_T0066906.1 MGP_NODShiLtJ_G0028450.1 mouse_genomes_project 4 130934622 130936165 + MGP_NODShiLtJ_P0066906 Tctex1d4 protein_coding protein_coding MGP_NODShiLtJ_T0066907.1 MGP_NODShiLtJ_G0028450.1 mouse_genomes_project 4 130934641 130936567 + MGP_NODShiLtJ_P0066907 Tctex1d4 protein_coding protein_coding MGP_NODShiLtJ_T0066908.1 MGP_NODShiLtJ_G0028450.1 mouse_genomes_project 4 130935002 130936344 + MGP_NODShiLtJ_P0066908 Tctex1d4 protein_coding protein_coding MGP_NODShiLtJ_T0066038.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110308137 110324667 - E130114P18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0066039.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110308137 110324643 - E130114P18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0066040.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110308137 110324683 - E130114P18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0066041.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110308137 110324654 - MGP_NODShiLtJ_P0066041 E130114P18Rik protein_coding protein_coding MGP_NODShiLtJ_T0066042.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110308137 110324676 - MGP_NODShiLtJ_P0066042 E130114P18Rik protein_coding protein_coding MGP_NODShiLtJ_T0066043.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110308137 110527220 - MGP_NODShiLtJ_P0066043 E130114P18Rik protein_coding protein_coding MGP_NODShiLtJ_T0066044.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110309194 110436359 - MGP_NODShiLtJ_P0066044 E130114P18Rik protein_coding protein_coding MGP_NODShiLtJ_T0066045.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110315210 110324659 - E130114P18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0066046.1 MGP_NODShiLtJ_G0028277.1 mouse_genomes_project 4 110424870 110527250 - E130114P18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0014529.1 MGP_NODShiLtJ_G0012637.1 mouse_genomes_project 4 103283335 103284667 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069349.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172779522 172807419 - MGP_NODShiLtJ_P0069349 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069350.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172779533 172792616 - Plch2 protein_coding retained_intron MGP_NODShiLtJ_T0069351.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172779774 172786225 - MGP_NODShiLtJ_P0069351 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069352.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172779774 172815901 - MGP_NODShiLtJ_P0069352 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069353.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172779774 172803442 - MGP_NODShiLtJ_P0069353 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069354.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172779780 172789053 - Plch2 protein_coding retained_intron MGP_NODShiLtJ_T0069355.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172779784 172807419 - MGP_NODShiLtJ_P0069355 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069356.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172780069 172840900 - MGP_NODShiLtJ_P0069356 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069357.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172782106 172852499 - MGP_NODShiLtJ_P0069357 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069358.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172794595 172807419 - MGP_NODShiLtJ_P0069358 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069359.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172803505 172854964 - MGP_NODShiLtJ_P0069359 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0069360.1 MGP_NODShiLtJ_G0029009.1 mouse_genomes_project 4 172805511 172815897 - MGP_NODShiLtJ_P0069360 Plch2 protein_coding protein_coding MGP_NODShiLtJ_T0004463.1 MGP_NODShiLtJ_G0003877.1 mouse_genomes_project 4 133124824 133125534 - Gm12867 antisense antisense MGP_NODShiLtJ_T0065712.1 MGP_NODShiLtJ_G0028195.1 mouse_genomes_project 4 82022792 82119757 - MGP_NODShiLtJ_P0065712 Rasef protein_coding protein_coding MGP_NODShiLtJ_T0065713.1 MGP_NODShiLtJ_G0028195.1 mouse_genomes_project 4 82022792 82119864 - MGP_NODShiLtJ_P0065713 Rasef protein_coding protein_coding MGP_NODShiLtJ_T0069215.1 MGP_NODShiLtJ_G0028985.1 mouse_genomes_project 4 169907432 169962123 + MGP_NODShiLtJ_P0069215 Chd5 protein_coding protein_coding MGP_NODShiLtJ_T0069216.1 MGP_NODShiLtJ_G0028985.1 mouse_genomes_project 4 169907432 169962123 + MGP_NODShiLtJ_P0069216 Chd5 protein_coding protein_coding MGP_NODShiLtJ_T0069217.1 MGP_NODShiLtJ_G0028985.1 mouse_genomes_project 4 169908547 169962110 + MGP_NODShiLtJ_P0069217 Chd5 protein_coding protein_coding MGP_NODShiLtJ_T0069218.1 MGP_NODShiLtJ_G0028985.1 mouse_genomes_project 4 169911255 169923360 + Chd5 protein_coding processed_transcript MGP_NODShiLtJ_T0069219.1 MGP_NODShiLtJ_G0028985.1 mouse_genomes_project 4 169942839 169962110 + Chd5 protein_coding processed_transcript MGP_NODShiLtJ_T0065642.1 MGP_NODShiLtJ_G0028175.1 mouse_genomes_project 4 69876682 69880988 + MGP_NODShiLtJ_P0065642 Orm2 protein_coding protein_coding MGP_NODShiLtJ_T0065643.1 MGP_NODShiLtJ_G0028175.1 mouse_genomes_project 4 69876720 69880986 + MGP_NODShiLtJ_P0065643 Orm2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0007839.1 MGP_NODShiLtJ_G0006405.1 mouse_genomes_project 4 114285958 114315318 - Gm12796 lincRNA lincRNA MGP_NODShiLtJ_T0011446.1 MGP_NODShiLtJ_G0009579.1 mouse_genomes_project 4 17694630 17694916 + Gm25971 misc_RNA misc_RNA MGP_NODShiLtJ_T0014572.1 MGP_NODShiLtJ_G0012680.1 mouse_genomes_project 4 119655242 119655508 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067301.1 MGP_NODShiLtJ_G0028546.1 mouse_genomes_project 4 138251243 138254729 - MGP_NODShiLtJ_P0067301 Ndufs5 protein_coding protein_coding MGP_NODShiLtJ_T0067302.1 MGP_NODShiLtJ_G0028546.1 mouse_genomes_project 4 138251243 138256566 - MGP_NODShiLtJ_P0067302 Ndufs5 protein_coding protein_coding MGP_NODShiLtJ_T0067303.1 MGP_NODShiLtJ_G0028546.1 mouse_genomes_project 4 138251243 138256550 - MGP_NODShiLtJ_P0067303 Ndufs5 protein_coding protein_coding MGP_NODShiLtJ_T0067304.1 MGP_NODShiLtJ_G0028546.1 mouse_genomes_project 4 138251402 138256545 - MGP_NODShiLtJ_P0067304 Ndufs5 protein_coding protein_coding MGP_NODShiLtJ_T0014653.1 MGP_NODShiLtJ_G0012761.1 mouse_genomes_project 4 143884560 143886730 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014482.1 MGP_NODShiLtJ_G0012590.1 mouse_genomes_project 4 83744184 83744386 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014605.1 MGP_NODShiLtJ_G0012713.1 mouse_genomes_project 4 131363197 131363576 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007786.1 MGP_NODShiLtJ_G0006359.1 mouse_genomes_project 4 61228338 61244471 - Gm12510 lincRNA lincRNA MGP_NODShiLtJ_T0014344.1 MGP_NODShiLtJ_G0012452.1 mouse_genomes_project 4 28634585 28635022 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064724.1 MGP_NODShiLtJ_G0027958.1 mouse_genomes_project 4 44477209 44482184 + MGP_NODShiLtJ_P0064724 Tmem215 protein_coding protein_coding MGP_NODShiLtJ_T0064725.1 MGP_NODShiLtJ_G0027958.1 mouse_genomes_project 4 44478160 44480654 + MGP_NODShiLtJ_P0064725 Tmem215 protein_coding protein_coding MGP_NODShiLtJ_T0066787.1 MGP_NODShiLtJ_G0028428.1 mouse_genomes_project 4 129877384 129878303 + MGP_NODShiLtJ_P0066787 1700042G07Rik protein_coding protein_coding MGP_NODShiLtJ_T0068635.1 MGP_NODShiLtJ_G0028846.1 mouse_genomes_project 4 157469638 157476562 + MGP_NODShiLtJ_P0068635 Arhgef19 protein_coding protein_coding MGP_NODShiLtJ_T0068636.1 MGP_NODShiLtJ_G0028846.1 mouse_genomes_project 4 157469789 157477637 + Arhgef19 protein_coding retained_intron MGP_NODShiLtJ_T0068637.1 MGP_NODShiLtJ_G0028846.1 mouse_genomes_project 4 157473003 157476506 + MGP_NODShiLtJ_P0068637 Arhgef19 protein_coding protein_coding MGP_NODShiLtJ_T0068638.1 MGP_NODShiLtJ_G0028846.1 mouse_genomes_project 4 157473017 157489209 + MGP_NODShiLtJ_P0068638 Arhgef19 protein_coding protein_coding MGP_NODShiLtJ_T0068639.1 MGP_NODShiLtJ_G0028846.1 mouse_genomes_project 4 157473041 157477148 + MGP_NODShiLtJ_P0068639 Arhgef19 protein_coding protein_coding MGP_NODShiLtJ_T0068640.1 MGP_NODShiLtJ_G0028846.1 mouse_genomes_project 4 157475573 157477591 + MGP_NODShiLtJ_P0068640 Arhgef19 protein_coding protein_coding MGP_NODShiLtJ_T0068641.1 MGP_NODShiLtJ_G0028846.1 mouse_genomes_project 4 157476545 157478257 + MGP_NODShiLtJ_P0068641 Arhgef19 protein_coding protein_coding MGP_NODShiLtJ_T0068642.1 MGP_NODShiLtJ_G0028846.1 mouse_genomes_project 4 157477072 157478124 + Arhgef19 protein_coding retained_intron MGP_NODShiLtJ_T0004439.1 MGP_NODShiLtJ_G0003860.1 mouse_genomes_project 4 121311706 121329534 - Lrp8os2 antisense antisense MGP_NODShiLtJ_T0004440.1 MGP_NODShiLtJ_G0003860.1 mouse_genomes_project 4 121311706 121317536 - Lrp8os2 antisense antisense MGP_NODShiLtJ_T0004441.1 MGP_NODShiLtJ_G0003860.1 mouse_genomes_project 4 121313665 121329486 - Lrp8os2 antisense antisense MGP_NODShiLtJ_T0004442.1 MGP_NODShiLtJ_G0003860.1 mouse_genomes_project 4 121317395 121329522 - Lrp8os2 antisense antisense MGP_NODShiLtJ_T0010525.1 MGP_NODShiLtJ_G0008658.1 mouse_genomes_project 4 147358629 147358719 - Gm22033 miRNA miRNA MGP_NODShiLtJ_T0014402.1 MGP_NODShiLtJ_G0012510.1 mouse_genomes_project 4 49756543 49756833 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097808.1 MGP_NODShiLtJ_G0036220.1 mouse_genomes_project 4 111565132 111565220 + pseudogene pseudogene MGP_NODShiLtJ_T0067067.1 MGP_NODShiLtJ_G0028485.1 mouse_genomes_project 4 132656358 132657306 + MGP_NODShiLtJ_P0067067 Olfr1339 protein_coding protein_coding MGP_NODShiLtJ_T0001397.1 MGP_NODShiLtJ_G0001316.1 mouse_genomes_project 4 159171617 159171836 + TEC TEC MGP_NODShiLtJ_T0066175.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115162663 115750080 + MGP_NODShiLtJ_P0066175 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0066176.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115162845 115293423 + Pde4b protein_coding retained_intron MGP_NODShiLtJ_T0066177.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115162861 115699402 + MGP_NODShiLtJ_P0066177 Pde4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066178.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115355879 115697729 + MGP_NODShiLtJ_P0066178 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0066179.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115356140 115751506 + MGP_NODShiLtJ_P0066179 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0066180.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115356367 115636562 + MGP_NODShiLtJ_P0066180 Pde4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066181.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115540206 115749783 + MGP_NODShiLtJ_P0066181 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0066182.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115548707 115672845 + MGP_NODShiLtJ_P0066182 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0066183.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115595090 115616252 + Pde4b protein_coding retained_intron MGP_NODShiLtJ_T0066184.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115711896 115750094 + MGP_NODShiLtJ_P0066184 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0066185.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115731813 115749950 + MGP_NODShiLtJ_P0066185 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0066186.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115733978 115750108 + MGP_NODShiLtJ_P0066186 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0066187.1 MGP_NODShiLtJ_G0028307.1 mouse_genomes_project 4 115734098 115747693 + MGP_NODShiLtJ_P0066187 Pde4b protein_coding protein_coding MGP_NODShiLtJ_T0014610.1 MGP_NODShiLtJ_G0012718.1 mouse_genomes_project 4 131694334 131694811 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0064554.1 MGP_NODShiLtJ_G0027917.1 mouse_genomes_project 4 25465221 25500610 - Ufl1 protein_coding retained_intron MGP_NODShiLtJ_T0064555.1 MGP_NODShiLtJ_G0027917.1 mouse_genomes_project 4 25467218 25500602 - MGP_NODShiLtJ_P0064555 Ufl1 protein_coding protein_coding MGP_NODShiLtJ_T0064556.1 MGP_NODShiLtJ_G0027917.1 mouse_genomes_project 4 25487440 25500598 - Ufl1 protein_coding processed_transcript MGP_NODShiLtJ_T0004368.1 MGP_NODShiLtJ_G0003804.1 mouse_genomes_project 4 9573281 9590484 + Gm11842 antisense antisense MGP_NODShiLtJ_T0068459.1 MGP_NODShiLtJ_G0028799.1 mouse_genomes_project 4 154255646 154260872 - Cda protein_coding retained_intron MGP_NODShiLtJ_T0068460.1 MGP_NODShiLtJ_G0028799.1 mouse_genomes_project 4 154255750 154290793 - MGP_NODShiLtJ_P0068460 Cda protein_coding protein_coding MGP_NODShiLtJ_T0065566.1 MGP_NODShiLtJ_G0028155.1 mouse_genomes_project 4 68697339 68712135 + MGP_NODShiLtJ_P0065566 Slc31a2 protein_coding protein_coding MGP_NODShiLtJ_T0014294.1 MGP_NODShiLtJ_G0012402.1 mouse_genomes_project 4 12693186 12693417 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007941.1 MGP_NODShiLtJ_G0006474.1 mouse_genomes_project 4 155994425 156005550 + Gm13028 lincRNA lincRNA MGP_NODShiLtJ_T0067523.1 MGP_NODShiLtJ_G0028601.1 mouse_genomes_project 4 142231532 142236396 - MGP_NODShiLtJ_P0067523 Gjb3 protein_coding protein_coding MGP_NODShiLtJ_T0067524.1 MGP_NODShiLtJ_G0028601.1 mouse_genomes_project 4 142231532 142238085 - MGP_NODShiLtJ_P0067524 Gjb3 protein_coding protein_coding MGP_NODShiLtJ_T0068831.1 MGP_NODShiLtJ_G0028914.1 mouse_genomes_project 4 164979447 165006309 - MGP_NODShiLtJ_P0068831 Plod1 protein_coding protein_coding MGP_NODShiLtJ_T0068832.1 MGP_NODShiLtJ_G0028914.1 mouse_genomes_project 4 164985277 164990569 - MGP_NODShiLtJ_P0068832 Plod1 protein_coding protein_coding MGP_NODShiLtJ_T0068833.1 MGP_NODShiLtJ_G0028914.1 mouse_genomes_project 4 164991925 165006284 - Plod1 protein_coding retained_intron MGP_NODShiLtJ_T0068834.1 MGP_NODShiLtJ_G0028914.1 mouse_genomes_project 4 164992312 164993205 - Plod1 protein_coding retained_intron MGP_NODShiLtJ_T0068835.1 MGP_NODShiLtJ_G0028914.1 mouse_genomes_project 4 164997145 165006267 - MGP_NODShiLtJ_P0068835 Plod1 protein_coding protein_coding MGP_NODShiLtJ_T0068836.1 MGP_NODShiLtJ_G0028914.1 mouse_genomes_project 4 165001209 165006250 - Plod1 protein_coding processed_transcript MGP_NODShiLtJ_T0004544.1 MGP_NODShiLtJ_G0003939.1 mouse_genomes_project 4 167957107 167958785 - Gm13091 antisense antisense MGP_NODShiLtJ_T0064618.1 MGP_NODShiLtJ_G0027931.1 mouse_genomes_project 4 35351275 35393094 + MGP_NODShiLtJ_P0064618 Gabrr2 protein_coding protein_coding MGP_NODShiLtJ_T0064619.1 MGP_NODShiLtJ_G0027931.1 mouse_genomes_project 4 35351388 35393094 + MGP_NODShiLtJ_P0064619 Gabrr2 protein_coding protein_coding MGP_NODShiLtJ_T0064620.1 MGP_NODShiLtJ_G0027931.1 mouse_genomes_project 4 35372411 35380424 + MGP_NODShiLtJ_P0064620 Gabrr2 protein_coding protein_coding MGP_NODShiLtJ_T0064621.1 MGP_NODShiLtJ_G0027931.1 mouse_genomes_project 4 35375114 35380680 + MGP_NODShiLtJ_P0064621 Gabrr2 protein_coding protein_coding MGP_NODShiLtJ_T0066208.1 MGP_NODShiLtJ_G0028311.1 mouse_genomes_project 4 116199284 116240416 - Wdr78 protein_coding retained_intron MGP_NODShiLtJ_T0066209.1 MGP_NODShiLtJ_G0028311.1 mouse_genomes_project 4 116199284 116283491 - MGP_NODShiLtJ_P0066209 Wdr78 protein_coding protein_coding MGP_NODShiLtJ_T0066210.1 MGP_NODShiLtJ_G0028311.1 mouse_genomes_project 4 116199284 116283491 - MGP_NODShiLtJ_P0066210 Wdr78 protein_coding protein_coding MGP_NODShiLtJ_T0066211.1 MGP_NODShiLtJ_G0028311.1 mouse_genomes_project 4 116199288 116283747 - MGP_NODShiLtJ_P0066211 Wdr78 protein_coding protein_coding MGP_NODShiLtJ_T0066212.1 MGP_NODShiLtJ_G0028311.1 mouse_genomes_project 4 116199288 116283416 - MGP_NODShiLtJ_P0066212 Wdr78 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0066213.1 MGP_NODShiLtJ_G0028311.1 mouse_genomes_project 4 116199320 116243033 - Wdr78 protein_coding retained_intron MGP_NODShiLtJ_T0066214.1 MGP_NODShiLtJ_G0028311.1 mouse_genomes_project 4 116200491 116202837 - Wdr78 protein_coding processed_transcript MGP_NODShiLtJ_T0066215.1 MGP_NODShiLtJ_G0028311.1 mouse_genomes_project 4 116248301 116253675 - MGP_NODShiLtJ_P0066215 Wdr78 protein_coding protein_coding MGP_NODShiLtJ_T0066909.1 MGP_NODShiLtJ_G0028451.1 mouse_genomes_project 4 130936475 130941694 - MGP_NODShiLtJ_P0066909 Plk3 protein_coding protein_coding MGP_NODShiLtJ_T0066910.1 MGP_NODShiLtJ_G0028451.1 mouse_genomes_project 4 130936483 130941774 - Plk3 protein_coding processed_transcript MGP_NODShiLtJ_T0064635.1 MGP_NODShiLtJ_G0027937.1 mouse_genomes_project 4 36367192 36378224 + Cnr1 protein_coding processed_transcript MGP_NODShiLtJ_T0064636.1 MGP_NODShiLtJ_G0027937.1 mouse_genomes_project 4 36367231 36391722 + MGP_NODShiLtJ_P0064636 Cnr1 protein_coding protein_coding MGP_NODShiLtJ_T0064637.1 MGP_NODShiLtJ_G0027937.1 mouse_genomes_project 4 36368801 36391710 + MGP_NODShiLtJ_P0064637 Cnr1 protein_coding protein_coding MGP_NODShiLtJ_T0014526.1 MGP_NODShiLtJ_G0012634.1 mouse_genomes_project 4 102346723 102347218 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0067352.1 MGP_NODShiLtJ_G0028561.1 mouse_genomes_project 4 139533087 139540019 - MGP_NODShiLtJ_P0067352 Maneal protein_coding protein_coding MGP_NODShiLtJ_T0100520.1 MGP_NODShiLtJ_G0038914.1 mouse_genomes_project 4 22045637 22045770 + Gm24607 snoRNA snoRNA MGP_NODShiLtJ_T0068784.1 MGP_NODShiLtJ_G0028896.1 mouse_genomes_project 4 161120037 161139450 - MGP_NODShiLtJ_P0068784 1700012P22Rik protein_coding protein_coding MGP_NODShiLtJ_T0068369.1 MGP_NODShiLtJ_G0028784.1 mouse_genomes_project 4 153146269 153175826 - MGP_NODShiLtJ_P0068369 protein_coding protein_coding MGP_NODShiLtJ_T0017918.1 MGP_NODShiLtJ_G0015425.1 mouse_genomes_project 4 107968177 107991902 - Gm830 processed_transcript processed_transcript MGP_NODShiLtJ_T0101934.1 MGP_NODShiLtJ_G0040102.1 mouse_genomes_project 4 137072604 137096718 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0065501.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64844957 64977317 - MGP_NODShiLtJ_P0065501 protein_coding protein_coding MGP_NODShiLtJ_T0065502.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64858743 64859964 - protein_coding processed_transcript MGP_NODShiLtJ_T0065503.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64859549 64976510 - MGP_NODShiLtJ_P0065503 protein_coding protein_coding MGP_NODShiLtJ_T0065504.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64863421 64868472 - protein_coding processed_transcript MGP_NODShiLtJ_T0065505.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64868222 64884328 - protein_coding processed_transcript MGP_NODShiLtJ_T0065506.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64880806 64976507 - MGP_NODShiLtJ_P0065506 protein_coding protein_coding MGP_NODShiLtJ_T0065507.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64882965 64885177 - protein_coding processed_transcript MGP_NODShiLtJ_T0065508.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64886356 64897693 - protein_coding processed_transcript MGP_NODShiLtJ_T0065509.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64896954 64977272 - MGP_NODShiLtJ_P0065509 protein_coding protein_coding MGP_NODShiLtJ_T0065510.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64916338 64977317 - MGP_NODShiLtJ_P0065510 protein_coding protein_coding MGP_NODShiLtJ_T0065511.1 MGP_NODShiLtJ_G0028134.1 mouse_genomes_project 4 64930576 64976482 - MGP_NODShiLtJ_P0065511 protein_coding protein_coding MGP_NODShiLtJ_T0014553.1 MGP_NODShiLtJ_G0012661.1 mouse_genomes_project 4 113312979 113313730 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099273.1 MGP_NODShiLtJ_G0037667.1 mouse_genomes_project 4 94160397 94160538 - Gm25899 snRNA snRNA MGP_NODShiLtJ_T0100582.1 MGP_NODShiLtJ_G0038976.1 mouse_genomes_project 4 145784675 145784748 + Snord85 snoRNA snoRNA MGP_NODShiLtJ_T0066118.1 MGP_NODShiLtJ_G0028291.1 mouse_genomes_project 4 112711244 112776472 - MGP_NODShiLtJ_P0066118 Itgb3bp protein_coding protein_coding MGP_NODShiLtJ_T0066119.1 MGP_NODShiLtJ_G0028291.1 mouse_genomes_project 4 112711744 112843624 - Itgb3bp protein_coding processed_transcript MGP_NODShiLtJ_T0066120.1 MGP_NODShiLtJ_G0028291.1 mouse_genomes_project 4 112713173 112776378 - Itgb3bp protein_coding processed_transcript MGP_NODShiLtJ_T0066121.1 MGP_NODShiLtJ_G0028291.1 mouse_genomes_project 4 112717846 112776420 - Itgb3bp protein_coding processed_transcript MGP_NODShiLtJ_T0066122.1 MGP_NODShiLtJ_G0028291.1 mouse_genomes_project 4 112727781 112776376 - Itgb3bp protein_coding processed_transcript MGP_NODShiLtJ_T0014356.1 MGP_NODShiLtJ_G0012464.1 mouse_genomes_project 4 32145780 32146315 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014261.1 MGP_NODShiLtJ_G0012369.1 mouse_genomes_project 4 364205 364805 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0065874.1 MGP_NODShiLtJ_G0028223.1 mouse_genomes_project 4 97660215 97746457 + MGP_NODShiLtJ_P0065874 Dennd4c protein_coding protein_coding MGP_NODShiLtJ_T0065875.1 MGP_NODShiLtJ_G0028223.1 mouse_genomes_project 4 97660215 97767781 + MGP_NODShiLtJ_P0065875 Dennd4c protein_coding protein_coding MGP_NODShiLtJ_T0065876.1 MGP_NODShiLtJ_G0028223.1 mouse_genomes_project 4 97684383 97766233 + MGP_NODShiLtJ_P0065876 Dennd4c protein_coding protein_coding MGP_NODShiLtJ_T0065877.1 MGP_NODShiLtJ_G0028223.1 mouse_genomes_project 4 97687924 97692736 + Dennd4c protein_coding processed_transcript MGP_NODShiLtJ_T0014633.1 MGP_NODShiLtJ_G0012741.1 mouse_genomes_project 4 137730274 137731134 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004549.1 MGP_NODShiLtJ_G0003944.1 mouse_genomes_project 4 171843513 171848386 + Trp73os antisense antisense MGP_NODShiLtJ_T0068963.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166427733 166577350 - MGP_NODShiLtJ_P0068963 Kif1b protein_coding protein_coding MGP_NODShiLtJ_T0068964.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166429432 166437615 - Kif1b protein_coding retained_intron MGP_NODShiLtJ_T0068965.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166430277 166449779 - MGP_NODShiLtJ_P0068965 Kif1b protein_coding protein_coding MGP_NODShiLtJ_T0068966.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166431650 166577164 - MGP_NODShiLtJ_P0068966 Kif1b protein_coding protein_coding MGP_NODShiLtJ_T0068967.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166459340 166463877 - Kif1b protein_coding retained_intron MGP_NODShiLtJ_T0068968.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166459739 166467569 - Kif1b protein_coding retained_intron MGP_NODShiLtJ_T0068969.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166468749 166477295 - Kif1b protein_coding retained_intron MGP_NODShiLtJ_T0068970.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166487511 166577281 - MGP_NODShiLtJ_P0068970 Kif1b protein_coding protein_coding MGP_NODShiLtJ_T0068971.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166490781 166577422 - MGP_NODShiLtJ_P0068971 Kif1b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0068972.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166499786 166502408 - Kif1b protein_coding retained_intron MGP_NODShiLtJ_T0068973.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166518868 166577351 - Kif1b protein_coding retained_intron MGP_NODShiLtJ_T0068974.1 MGP_NODShiLtJ_G0028941.1 mouse_genomes_project 4 166547054 166577322 - Kif1b protein_coding retained_intron MGP_NODShiLtJ_T0064844.1 MGP_NODShiLtJ_G0027987.1 mouse_genomes_project 4 45907346 45913783 + protein_coding retained_intron MGP_NODShiLtJ_T0064845.1 MGP_NODShiLtJ_G0027987.1 mouse_genomes_project 4 45907360 45911666 + protein_coding retained_intron MGP_NODShiLtJ_T0064846.1 MGP_NODShiLtJ_G0027987.1 mouse_genomes_project 4 45909252 45913931 + protein_coding retained_intron MGP_NODShiLtJ_T0067148.1 MGP_NODShiLtJ_G0028507.1 mouse_genomes_project 4 133591443 133600728 - MGP_NODShiLtJ_P0067148 AA415398 protein_coding protein_coding MGP_NODShiLtJ_T0067149.1 MGP_NODShiLtJ_G0028507.1 mouse_genomes_project 4 133592571 133597204 - AA415398 protein_coding processed_transcript MGP_NODShiLtJ_T0067150.1 MGP_NODShiLtJ_G0028507.1 mouse_genomes_project 4 133592798 133601089 - AA415398 protein_coding processed_transcript MGP_NODShiLtJ_T0067151.1 MGP_NODShiLtJ_G0028507.1 mouse_genomes_project 4 133595502 133601488 - AA415398 protein_coding processed_transcript MGP_NODShiLtJ_T0068813.1 MGP_NODShiLtJ_G0028910.1 mouse_genomes_project 4 164887315 164908517 - MGP_NODShiLtJ_P0068813 Zfp933 protein_coding protein_coding MGP_NODShiLtJ_T0068814.1 MGP_NODShiLtJ_G0028910.1 mouse_genomes_project 4 164890892 164908517 - MGP_NODShiLtJ_P0068814 Zfp933 protein_coding protein_coding MGP_NODShiLtJ_T0099290.1 MGP_NODShiLtJ_G0037684.1 mouse_genomes_project 4 122122042 122122149 - Gm22345 snRNA snRNA MGP_NODShiLtJ_T0065246.1 MGP_NODShiLtJ_G0028062.1 mouse_genomes_project 4 50853555 50856359 + MGP_NODShiLtJ_P0065246 Foxe1 protein_coding protein_coding MGP_NODShiLtJ_T0068183.1 MGP_NODShiLtJ_G0028738.1 mouse_genomes_project 4 150338953 150348270 - Tmem57 protein_coding processed_transcript MGP_NODShiLtJ_T0068184.1 MGP_NODShiLtJ_G0028738.1 mouse_genomes_project 4 150338953 150396052 - MGP_NODShiLtJ_P0068184 Tmem57 protein_coding protein_coding MGP_NODShiLtJ_T0068185.1 MGP_NODShiLtJ_G0028738.1 mouse_genomes_project 4 150348250 150395856 - MGP_NODShiLtJ_P0068185 Tmem57 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068186.1 MGP_NODShiLtJ_G0028738.1 mouse_genomes_project 4 150365435 150395970 - MGP_NODShiLtJ_P0068186 Tmem57 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0068187.1 MGP_NODShiLtJ_G0028738.1 mouse_genomes_project 4 150376057 150396024 - Tmem57 protein_coding retained_intron MGP_NODShiLtJ_T0064448.1 MGP_NODShiLtJ_G0027888.1 mouse_genomes_project 4 14045467 14084599 + MGP_NODShiLtJ_P0064448 Nbn protein_coding protein_coding MGP_NODShiLtJ_T0064449.1 MGP_NODShiLtJ_G0027888.1 mouse_genomes_project 4 14045509 14073562 + MGP_NODShiLtJ_P0064449 Nbn protein_coding protein_coding MGP_NODShiLtJ_T0069524.1 MGP_NODShiLtJ_G0029040.1 mouse_genomes_project 4 173764272 173765907 - Pusl1 protein_coding processed_transcript MGP_NODShiLtJ_T0069526.1 MGP_NODShiLtJ_G0029040.1 mouse_genomes_project 4 173765255 173768169 - MGP_NODShiLtJ_P0069526 Pusl1 protein_coding protein_coding MGP_NODShiLtJ_T0069527.1 MGP_NODShiLtJ_G0029040.1 mouse_genomes_project 4 173766773 173767597 - Pusl1 protein_coding retained_intron MGP_NODShiLtJ_T0069528.1 MGP_NODShiLtJ_G0029040.1 mouse_genomes_project 4 173766884 173768114 - Pusl1 protein_coding retained_intron MGP_NODShiLtJ_T0069529.1 MGP_NODShiLtJ_G0029040.1 mouse_genomes_project 4 173767168 173768143 - Pusl1 protein_coding retained_intron MGP_NODShiLtJ_T0069530.1 MGP_NODShiLtJ_G0029040.1 mouse_genomes_project 4 173767229 173768157 - Pusl1 protein_coding processed_transcript MGP_NODShiLtJ_T0069531.1 MGP_NODShiLtJ_G0029040.1 mouse_genomes_project 4 173767439 173768116 - Pusl1 protein_coding retained_intron MGP_NODShiLtJ_T0014571.1 MGP_NODShiLtJ_G0012679.1 mouse_genomes_project 4 119532986 119534654 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011461.1 MGP_NODShiLtJ_G0009594.1 mouse_genomes_project 4 88275215 88275301 + Gm22262 misc_RNA misc_RNA MGP_NODShiLtJ_T0007784.1 MGP_NODShiLtJ_G0006358.1 mouse_genomes_project 4 60876657 61039246 - Gm12514 lincRNA lincRNA MGP_NODShiLtJ_T0007785.1 MGP_NODShiLtJ_G0006358.1 mouse_genomes_project 4 60876894 60880952 - Gm12514 lincRNA lincRNA MGP_NODShiLtJ_T0065075.1 MGP_NODShiLtJ_G0028029.1 mouse_genomes_project 4 48048518 48049478 - MGP_NODShiLtJ_P0065075 Olfr159 protein_coding protein_coding MGP_NODShiLtJ_T0065199.1 MGP_NODShiLtJ_G0028052.1 mouse_genomes_project 4 49869294 49928840 - Shb protein_coding processed_transcript MGP_NODShiLtJ_T0065200.1 MGP_NODShiLtJ_G0028052.1 mouse_genomes_project 4 49869294 49977279 - MGP_NODShiLtJ_P0065200 Shb protein_coding protein_coding MGP_NODShiLtJ_T0065201.1 MGP_NODShiLtJ_G0028052.1 mouse_genomes_project 4 49890718 49938879 - Shb protein_coding processed_transcript MGP_NODShiLtJ_T0065202.1 MGP_NODShiLtJ_G0028052.1 mouse_genomes_project 4 49893518 49935441 - Shb protein_coding retained_intron MGP_NODShiLtJ_T0065203.1 MGP_NODShiLtJ_G0028052.1 mouse_genomes_project 4 49904141 49935832 - MGP_NODShiLtJ_P0065203 Shb protein_coding protein_coding MGP_NODShiLtJ_T0065204.1 MGP_NODShiLtJ_G0028052.1 mouse_genomes_project 4 49904332 49979419 - MGP_NODShiLtJ_P0065204 Shb protein_coding protein_coding MGP_NODShiLtJ_T0073065.1 MGP_NODShiLtJ_G0029716.1 mouse_genomes_project 5 129283632 129370452 - MGP_NODShiLtJ_P0073065 2900026A02Rik protein_coding protein_coding MGP_NODShiLtJ_T0073066.1 MGP_NODShiLtJ_G0029716.1 mouse_genomes_project 5 129286298 129343277 - MGP_NODShiLtJ_P0073066 2900026A02Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0004778.1 MGP_NODShiLtJ_G0004111.1 mouse_genomes_project 5 142268584 142271666 - 4930404A12Rik antisense antisense MGP_NODShiLtJ_T0004779.1 MGP_NODShiLtJ_G0004111.1 mouse_genomes_project 5 142268585 142271666 - 4930404A12Rik antisense antisense MGP_NODShiLtJ_T0075273.1 MGP_NODShiLtJ_G0030121.1 mouse_genomes_project 5 162338712 162369611 - MGP_NODShiLtJ_P0075273 Fbxl18 protein_coding protein_coding MGP_NODShiLtJ_T0075274.1 MGP_NODShiLtJ_G0030121.1 mouse_genomes_project 5 162343492 162344601 - Fbxl18 protein_coding retained_intron MGP_NODShiLtJ_T0075275.1 MGP_NODShiLtJ_G0030121.1 mouse_genomes_project 5 162343505 162369428 - MGP_NODShiLtJ_P0075275 Fbxl18 protein_coding protein_coding MGP_NODShiLtJ_T0075276.1 MGP_NODShiLtJ_G0030121.1 mouse_genomes_project 5 162343768 162344210 - Fbxl18 protein_coding processed_transcript MGP_NODShiLtJ_T0075277.1 MGP_NODShiLtJ_G0030121.1 mouse_genomes_project 5 162354005 162369611 - Fbxl18 protein_coding retained_intron MGP_NODShiLtJ_T0010613.1 MGP_NODShiLtJ_G0008746.1 mouse_genomes_project 5 152644547 152644616 + Mir3965 miRNA miRNA MGP_NODShiLtJ_T0071500.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72845136 72897384 - MGP_NODShiLtJ_P0071500 Smim14 protein_coding protein_coding MGP_NODShiLtJ_T0071501.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72848050 72897044 - MGP_NODShiLtJ_P0071501 Smim14 protein_coding protein_coding MGP_NODShiLtJ_T0071502.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72848051 72896855 - MGP_NODShiLtJ_P0071502 Smim14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071503.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72848174 72859589 - Smim14 protein_coding retained_intron MGP_NODShiLtJ_T0071504.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72851306 72856797 - Smim14 protein_coding retained_intron MGP_NODShiLtJ_T0071505.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72858843 72948381 - MGP_NODShiLtJ_P0071505 Smim14 protein_coding protein_coding MGP_NODShiLtJ_T0071506.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72865673 72948326 - Smim14 protein_coding retained_intron MGP_NODShiLtJ_T0071507.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72867621 72896865 - Smim14 protein_coding retained_intron MGP_NODShiLtJ_T0071508.1 MGP_NODShiLtJ_G0029383.1 mouse_genomes_project 5 72893932 72897384 - Smim14 protein_coding retained_intron MGP_NODShiLtJ_T0101964.1 MGP_NODShiLtJ_G0040132.1 mouse_genomes_project 5 155618138 155620041 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004835.1 MGP_NODShiLtJ_G0004151.1 mouse_genomes_project 5 169683795 169688912 - Gm19719 antisense antisense MGP_NODShiLtJ_T0008365.1 MGP_NODShiLtJ_G0006776.1 mouse_genomes_project 5 166232746 166235159 - Gm43625 lincRNA lincRNA MGP_NODShiLtJ_T0072113.1 MGP_NODShiLtJ_G0029500.1 mouse_genomes_project 5 100669489 100672437 + MGP_NODShiLtJ_P0072113 Cabs1 protein_coding protein_coding MGP_NODShiLtJ_T0008351.1 MGP_NODShiLtJ_G0006765.1 mouse_genomes_project 5 159084522 159094043 + Gm42423 lincRNA lincRNA MGP_NODShiLtJ_T0100642.1 MGP_NODShiLtJ_G0039036.1 mouse_genomes_project 5 147797887 147798022 + Gm23245 snoRNA snoRNA MGP_NODShiLtJ_T0010615.1 MGP_NODShiLtJ_G0008748.1 mouse_genomes_project 5 152907014 152907053 + Mir7228 miRNA miRNA MGP_NODShiLtJ_T0001407.1 MGP_NODShiLtJ_G0001326.1 mouse_genomes_project 5 5939621 5943006 - TEC TEC MGP_NODShiLtJ_T0072360.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110013992 110151557 - MGP_NODShiLtJ_P0072360 protein_coding protein_coding MGP_NODShiLtJ_T0072361.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110019235 110036981 - protein_coding retained_intron MGP_NODShiLtJ_T0072362.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110019248 110151322 - MGP_NODShiLtJ_P0072362 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072363.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110019396 110151322 - MGP_NODShiLtJ_P0072363 protein_coding protein_coding MGP_NODShiLtJ_T0072364.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110020460 110151114 - MGP_NODShiLtJ_P0072364 protein_coding protein_coding MGP_NODShiLtJ_T0072365.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110020839 110061345 - MGP_NODShiLtJ_P0072365 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072366.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110076671 110119651 - protein_coding retained_intron MGP_NODShiLtJ_T0072367.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110077360 110151309 - MGP_NODShiLtJ_P0072367 protein_coding protein_coding MGP_NODShiLtJ_T0072368.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110119651 110151438 - MGP_NODShiLtJ_P0072368 protein_coding protein_coding MGP_NODShiLtJ_T0072369.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110119687 110153673 - MGP_NODShiLtJ_P0072369 protein_coding protein_coding MGP_NODShiLtJ_T0072370.1 MGP_NODShiLtJ_G0029564.1 mouse_genomes_project 5 110119798 110151330 - MGP_NODShiLtJ_P0072370 protein_coding protein_coding MGP_NODShiLtJ_T0004628.1 MGP_NODShiLtJ_G0004004.1 mouse_genomes_project 5 46918093 46935066 + Gm42984 antisense antisense MGP_NODShiLtJ_T0075342.1 MGP_NODShiLtJ_G0030135.1 mouse_genomes_project 5 162979153 163022100 + MGP_NODShiLtJ_P0075342 Daglb protein_coding protein_coding MGP_NODShiLtJ_T0075343.1 MGP_NODShiLtJ_G0030135.1 mouse_genomes_project 5 162979182 162989772 + Daglb protein_coding retained_intron MGP_NODShiLtJ_T0075344.1 MGP_NODShiLtJ_G0030135.1 mouse_genomes_project 5 162987342 162992219 + Daglb protein_coding retained_intron MGP_NODShiLtJ_T0075345.1 MGP_NODShiLtJ_G0030135.1 mouse_genomes_project 5 163002930 163006247 + Daglb protein_coding retained_intron MGP_NODShiLtJ_T0014984.1 MGP_NODShiLtJ_G0013092.1 mouse_genomes_project 5 121468035 121468891 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004693.1 MGP_NODShiLtJ_G0004053.1 mouse_genomes_project 5 115182648 115189529 + Gm15777 antisense antisense MGP_NODShiLtJ_T0014874.1 MGP_NODShiLtJ_G0012982.1 mouse_genomes_project 5 65783711 65784123 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071153.1 MGP_NODShiLtJ_G0029318.1 mouse_genomes_project 5 40734515 40918814 - MGP_NODShiLtJ_P0071153 Clnk protein_coding protein_coding MGP_NODShiLtJ_T0071154.1 MGP_NODShiLtJ_G0029318.1 mouse_genomes_project 5 40734515 40918814 - MGP_NODShiLtJ_P0071154 Clnk protein_coding protein_coding MGP_NODShiLtJ_T0008041.1 MGP_NODShiLtJ_G0006546.1 mouse_genomes_project 5 41393240 41399386 + Gm43454 lincRNA lincRNA MGP_NODShiLtJ_T0008123.1 MGP_NODShiLtJ_G0006612.1 mouse_genomes_project 5 97792626 97794604 + Gm43567 lincRNA lincRNA MGP_NODShiLtJ_T0001480.1 MGP_NODShiLtJ_G0001396.1 mouse_genomes_project 5 38805186 38805326 + TEC TEC MGP_NODShiLtJ_T0008266.1 MGP_NODShiLtJ_G0006711.1 mouse_genomes_project 5 136071214 136076725 - Gm7538 lincRNA lincRNA MGP_NODShiLtJ_T0001706.1 MGP_NODShiLtJ_G0001620.1 mouse_genomes_project 5 121865457 121868371 - TEC TEC MGP_NODShiLtJ_T0015084.1 MGP_NODShiLtJ_G0013192.1 mouse_genomes_project 5 165793592 165793752 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073107.1 MGP_NODShiLtJ_G0029726.1 mouse_genomes_project 5 130087769 130088800 - MGP_NODShiLtJ_P0073107 Selplg protein_coding protein_coding MGP_NODShiLtJ_T0073108.1 MGP_NODShiLtJ_G0029726.1 mouse_genomes_project 5 130087780 130101265 - MGP_NODShiLtJ_P0073108 Selplg protein_coding protein_coding MGP_NODShiLtJ_T0073109.1 MGP_NODShiLtJ_G0029726.1 mouse_genomes_project 5 130087788 130088551 - MGP_NODShiLtJ_P0073109 Selplg protein_coding protein_coding MGP_NODShiLtJ_T0073110.1 MGP_NODShiLtJ_G0029726.1 mouse_genomes_project 5 130087788 130088491 - MGP_NODShiLtJ_P0073110 Selplg protein_coding protein_coding MGP_NODShiLtJ_T0073111.1 MGP_NODShiLtJ_G0029726.1 mouse_genomes_project 5 130089339 130103408 - MGP_NODShiLtJ_P0073111 Selplg protein_coding protein_coding MGP_NODShiLtJ_T0073112.1 MGP_NODShiLtJ_G0029726.1 mouse_genomes_project 5 130098918 130101236 - Selplg protein_coding retained_intron MGP_NODShiLtJ_T0014885.1 MGP_NODShiLtJ_G0012993.1 mouse_genomes_project 5 70939495 70939955 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075591.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167582194 167709743 + MGP_NODShiLtJ_P0075591 Pan3 protein_coding protein_coding MGP_NODShiLtJ_T0075592.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167582486 167709737 + MGP_NODShiLtJ_P0075592 Pan3 protein_coding protein_coding MGP_NODShiLtJ_T0075593.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167582929 167610129 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075594.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167582929 167608524 + Pan3 protein_coding processed_transcript MGP_NODShiLtJ_T0075595.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167582929 167687810 + MGP_NODShiLtJ_P0075595 Pan3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075596.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167605615 167646250 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075597.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167605619 167707187 + MGP_NODShiLtJ_P0075597 Pan3 protein_coding protein_coding MGP_NODShiLtJ_T0075598.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167605619 167707187 + MGP_NODShiLtJ_P0075598 Pan3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075599.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167605699 167687435 + MGP_NODShiLtJ_P0075599 Pan3 protein_coding protein_coding MGP_NODShiLtJ_T0075600.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167606624 167608902 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075601.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167608050 167651760 + Pan3 protein_coding processed_transcript MGP_NODShiLtJ_T0075602.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167608081 167709737 + MGP_NODShiLtJ_P0075602 Pan3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075603.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167677646 167682102 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075604.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167679430 167687465 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075605.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167679831 167709737 + MGP_NODShiLtJ_P0075605 Pan3 protein_coding protein_coding MGP_NODShiLtJ_T0075606.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167686877 167687791 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075607.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167690479 167709729 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075608.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167690684 167692465 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075609.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167690760 167694072 + Pan3 protein_coding processed_transcript MGP_NODShiLtJ_T0075610.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167692120 167694017 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075611.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167696945 167704392 + Pan3 protein_coding retained_intron MGP_NODShiLtJ_T0075612.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167697837 167706918 + Pan3 protein_coding processed_transcript MGP_NODShiLtJ_T0075613.1 MGP_NODShiLtJ_G0030198.1 mouse_genomes_project 5 167700612 167709734 + MGP_NODShiLtJ_P0075613 Pan3 protein_coding protein_coding MGP_NODShiLtJ_T0073356.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132050714 132109963 + MGP_NODShiLtJ_P0073356 Gcn1l1 protein_coding protein_coding MGP_NODShiLtJ_T0073357.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132050732 132069903 + Gcn1l1 protein_coding retained_intron MGP_NODShiLtJ_T0073358.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132050734 132066945 + Gcn1l1 protein_coding retained_intron MGP_NODShiLtJ_T0073359.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132050736 132070412 + Gcn1l1 protein_coding retained_intron MGP_NODShiLtJ_T0073360.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132050763 132052681 + Gcn1l1 protein_coding retained_intron MGP_NODShiLtJ_T0073361.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132068061 132073083 + Gcn1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0073362.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132091514 132109957 + Gcn1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0073363.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132097062 132097907 + Gcn1l1 protein_coding retained_intron MGP_NODShiLtJ_T0073364.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132099156 132100715 + Gcn1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0073365.1 MGP_NODShiLtJ_G0029774.1 mouse_genomes_project 5 132102197 132103345 + Gcn1l1 protein_coding retained_intron MGP_NODShiLtJ_T0072232.1 MGP_NODShiLtJ_G0029540.1 mouse_genomes_project 5 105077156 105091718 - Rchy1 protein_coding processed_transcript MGP_NODShiLtJ_T0072233.1 MGP_NODShiLtJ_G0029540.1 mouse_genomes_project 5 105077156 105092230 - MGP_NODShiLtJ_P0072233 Rchy1 protein_coding protein_coding MGP_NODShiLtJ_T0072234.1 MGP_NODShiLtJ_G0029540.1 mouse_genomes_project 5 105077253 105091897 - MGP_NODShiLtJ_P0072234 Rchy1 protein_coding protein_coding MGP_NODShiLtJ_T0072235.1 MGP_NODShiLtJ_G0029540.1 mouse_genomes_project 5 105080106 105082007 - Rchy1 protein_coding retained_intron MGP_NODShiLtJ_T0072236.1 MGP_NODShiLtJ_G0029540.1 mouse_genomes_project 5 105090842 105091888 - Rchy1 protein_coding retained_intron MGP_NODShiLtJ_T0004668.1 MGP_NODShiLtJ_G0004037.1 mouse_genomes_project 5 92229787 92252200 - antisense antisense MGP_NODShiLtJ_T0070034.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24142335 24257937 - MGP_NODShiLtJ_P0070034 Srpk2 protein_coding protein_coding MGP_NODShiLtJ_T0070035.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24145474 24323571 - MGP_NODShiLtJ_P0070035 Srpk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070036.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24167470 24184544 - Srpk2 protein_coding processed_transcript MGP_NODShiLtJ_T0070037.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24169683 24322298 - MGP_NODShiLtJ_P0070037 Srpk2 protein_coding protein_coding MGP_NODShiLtJ_T0070038.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24187685 24322251 - Srpk2 protein_coding retained_intron MGP_NODShiLtJ_T0070039.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24190059 24192466 - Srpk2 protein_coding retained_intron MGP_NODShiLtJ_T0070040.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24190455 24331830 - MGP_NODShiLtJ_P0070040 Srpk2 protein_coding protein_coding MGP_NODShiLtJ_T0070041.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24208949 24323478 - MGP_NODShiLtJ_P0070041 Srpk2 protein_coding protein_coding MGP_NODShiLtJ_T0070042.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24209054 24331813 - MGP_NODShiLtJ_P0070042 Srpk2 protein_coding protein_coding MGP_NODShiLtJ_T0070043.1 MGP_NODShiLtJ_G0029132.1 mouse_genomes_project 5 24256129 24257958 - Srpk2 protein_coding retained_intron MGP_NODShiLtJ_T0072789.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 123990062 124012314 - MGP_NODShiLtJ_P0072789 Gak protein_coding protein_coding MGP_NODShiLtJ_T0072790.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 123990065 124054060 - MGP_NODShiLtJ_P0072790 Gak protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072791.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 123990065 124054060 - MGP_NODShiLtJ_P0072791 Gak protein_coding protein_coding MGP_NODShiLtJ_T0072792.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 123990071 124054060 - MGP_NODShiLtJ_P0072792 Gak protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072793.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 123990824 123992517 - Gak protein_coding retained_intron MGP_NODShiLtJ_T0072794.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 123992082 124054076 - MGP_NODShiLtJ_P0072794 Gak protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072795.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 123992622 123997890 - Gak protein_coding processed_transcript MGP_NODShiLtJ_T0072796.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 123997546 124001603 - Gak protein_coding retained_intron MGP_NODShiLtJ_T0072797.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 124000723 124049415 - Gak protein_coding retained_intron MGP_NODShiLtJ_T0072798.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 124003740 124012350 - MGP_NODShiLtJ_P0072798 Gak protein_coding protein_coding MGP_NODShiLtJ_T0072799.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 124005016 124018107 - MGP_NODShiLtJ_P0072799 Gak protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072800.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 124034842 124053744 - Gak protein_coding processed_transcript MGP_NODShiLtJ_T0072801.1 MGP_NODShiLtJ_G0029660.1 mouse_genomes_project 5 124047632 124054014 - MGP_NODShiLtJ_P0072801 Gak protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075254.1 MGP_NODShiLtJ_G0030116.1 mouse_genomes_project 5 161946313 161950552 - MGP_NODShiLtJ_P0075254 Papolb protein_coding protein_coding MGP_NODShiLtJ_T0071402.1 MGP_NODShiLtJ_G0029362.1 mouse_genomes_project 5 68579726 68582067 + MGP_NODShiLtJ_P0071402 G6pd2 protein_coding protein_coding MGP_NODShiLtJ_T0001621.1 MGP_NODShiLtJ_G0001536.1 mouse_genomes_project 5 74459795 74462497 + TEC TEC MGP_NODShiLtJ_T0014758.1 MGP_NODShiLtJ_G0012866.1 mouse_genomes_project 5 20985966 20986271 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015064.1 MGP_NODShiLtJ_G0013172.1 mouse_genomes_project 5 159702063 159702537 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010559.1 MGP_NODShiLtJ_G0008692.1 mouse_genomes_project 5 7071915 7071991 + Mir879 miRNA miRNA MGP_NODShiLtJ_T0075372.1 MGP_NODShiLtJ_G0030142.1 mouse_genomes_project 5 163402271 163410344 - MGP_NODShiLtJ_P0075372 Aimp2 protein_coding protein_coding MGP_NODShiLtJ_T0075373.1 MGP_NODShiLtJ_G0030142.1 mouse_genomes_project 5 163402271 163410352 - MGP_NODShiLtJ_P0075373 Aimp2 protein_coding protein_coding MGP_NODShiLtJ_T0075374.1 MGP_NODShiLtJ_G0030142.1 mouse_genomes_project 5 163405655 163410289 - Aimp2 protein_coding retained_intron MGP_NODShiLtJ_T0075375.1 MGP_NODShiLtJ_G0030142.1 mouse_genomes_project 5 163405940 163410293 - Aimp2 protein_coding retained_intron MGP_NODShiLtJ_T0073197.1 MGP_NODShiLtJ_G0029742.1 mouse_genomes_project 5 130968805 131004970 - MGP_NODShiLtJ_P0073197 Trpv4 protein_coding protein_coding MGP_NODShiLtJ_T0073198.1 MGP_NODShiLtJ_G0029742.1 mouse_genomes_project 5 130968807 131004967 - MGP_NODShiLtJ_P0073198 Trpv4 protein_coding protein_coding MGP_NODShiLtJ_T0073199.1 MGP_NODShiLtJ_G0029742.1 mouse_genomes_project 5 130968810 130982945 - Trpv4 protein_coding retained_intron MGP_NODShiLtJ_T0073200.1 MGP_NODShiLtJ_G0029742.1 mouse_genomes_project 5 130969306 130991448 - MGP_NODShiLtJ_P0073200 Trpv4 protein_coding protein_coding MGP_NODShiLtJ_T0073201.1 MGP_NODShiLtJ_G0029742.1 mouse_genomes_project 5 130969306 130991448 - MGP_NODShiLtJ_P0073201 Trpv4 protein_coding protein_coding MGP_NODShiLtJ_T0073202.1 MGP_NODShiLtJ_G0029742.1 mouse_genomes_project 5 130969306 130991448 - MGP_NODShiLtJ_P0073202 Trpv4 protein_coding protein_coding MGP_NODShiLtJ_T0073203.1 MGP_NODShiLtJ_G0029742.1 mouse_genomes_project 5 130973360 130977255 - Trpv4 protein_coding retained_intron MGP_NODShiLtJ_T0015020.1 MGP_NODShiLtJ_G0013128.1 mouse_genomes_project 5 131627456 131627819 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008178.1 MGP_NODShiLtJ_G0006654.1 mouse_genomes_project 5 120550654 120556297 + Gm26519 lincRNA lincRNA MGP_NODShiLtJ_T0004650.1 MGP_NODShiLtJ_G0004022.1 mouse_genomes_project 5 74840514 74841812 - Gm42670 antisense antisense MGP_NODShiLtJ_T0074831.1 MGP_NODShiLtJ_G0030030.1 mouse_genomes_project 5 156216177 156217165 - MGP_NODShiLtJ_P0074831 Pop7 protein_coding protein_coding MGP_NODShiLtJ_T0074832.1 MGP_NODShiLtJ_G0030030.1 mouse_genomes_project 5 156216178 156217258 - MGP_NODShiLtJ_P0074832 Pop7 protein_coding protein_coding MGP_NODShiLtJ_T0008135.1 MGP_NODShiLtJ_G0006624.1 mouse_genomes_project 5 106026688 106033506 - 4932430I15Rik lincRNA lincRNA MGP_NODShiLtJ_T0001410.1 MGP_NODShiLtJ_G0001329.1 mouse_genomes_project 5 6480799 6481077 + TEC TEC MGP_NODShiLtJ_T0010587.1 MGP_NODShiLtJ_G0008720.1 mouse_genomes_project 5 93654801 93654947 - Mir1187 miRNA miRNA MGP_NODShiLtJ_T0001769.1 MGP_NODShiLtJ_G0001683.1 mouse_genomes_project 5 139849023 139851897 - TEC TEC MGP_NODShiLtJ_T0098046.1 MGP_NODShiLtJ_G0036458.1 mouse_genomes_project 5 57373875 57373985 + Gm26486 rRNA rRNA MGP_NODShiLtJ_T0072026.1 MGP_NODShiLtJ_G0029467.1 mouse_genomes_project 5 98184883 98231365 + MGP_NODShiLtJ_P0072026 Stap1 protein_coding protein_coding MGP_NODShiLtJ_T0072027.1 MGP_NODShiLtJ_G0029467.1 mouse_genomes_project 5 98184887 98211777 + Stap1 protein_coding retained_intron MGP_NODShiLtJ_T0072028.1 MGP_NODShiLtJ_G0029467.1 mouse_genomes_project 5 98184911 98200170 + Stap1 protein_coding retained_intron MGP_NODShiLtJ_T0072029.1 MGP_NODShiLtJ_G0029467.1 mouse_genomes_project 5 98184920 98200166 + Stap1 protein_coding retained_intron MGP_NODShiLtJ_T0072030.1 MGP_NODShiLtJ_G0029467.1 mouse_genomes_project 5 98184949 98226994 + MGP_NODShiLtJ_P0072030 Stap1 protein_coding protein_coding MGP_NODShiLtJ_T0072031.1 MGP_NODShiLtJ_G0029467.1 mouse_genomes_project 5 98200627 98208839 + Stap1 protein_coding retained_intron MGP_NODShiLtJ_T0004608.1 MGP_NODShiLtJ_G0003989.1 mouse_genomes_project 5 36421830 36423591 + Gm15522 antisense antisense MGP_NODShiLtJ_T0074697.1 MGP_NODShiLtJ_G0030005.1 mouse_genomes_project 5 154686229 154711118 - MGP_NODShiLtJ_P0074697 Orai2 protein_coding protein_coding MGP_NODShiLtJ_T0074698.1 MGP_NODShiLtJ_G0030005.1 mouse_genomes_project 5 154686234 154711033 - MGP_NODShiLtJ_P0074698 Orai2 protein_coding protein_coding MGP_NODShiLtJ_T0074699.1 MGP_NODShiLtJ_G0030005.1 mouse_genomes_project 5 154690531 154711039 - MGP_NODShiLtJ_P0074699 Orai2 protein_coding protein_coding MGP_NODShiLtJ_T0074700.1 MGP_NODShiLtJ_G0030005.1 mouse_genomes_project 5 154706657 154711038 - Orai2 protein_coding retained_intron MGP_NODShiLtJ_T0072775.1 MGP_NODShiLtJ_G0029655.1 mouse_genomes_project 5 123797995 123849673 + MGP_NODShiLtJ_P0072775 Pde6b protein_coding protein_coding MGP_NODShiLtJ_T0072776.1 MGP_NODShiLtJ_G0029655.1 mouse_genomes_project 5 123798030 123849597 + Pde6b protein_coding retained_intron MGP_NODShiLtJ_T0072777.1 MGP_NODShiLtJ_G0029655.1 mouse_genomes_project 5 123848306 123850327 + Pde6b protein_coding retained_intron MGP_NODShiLtJ_T0070686.1 MGP_NODShiLtJ_G0029246.1 mouse_genomes_project 5 34802179 34819952 - Spon2 protein_coding retained_intron MGP_NODShiLtJ_T0070687.1 MGP_NODShiLtJ_G0029246.1 mouse_genomes_project 5 34817932 34822451 - MGP_NODShiLtJ_P0070687 Spon2 protein_coding protein_coding MGP_NODShiLtJ_T0070688.1 MGP_NODShiLtJ_G0029246.1 mouse_genomes_project 5 34817939 34822185 - Spon2 protein_coding retained_intron MGP_NODShiLtJ_T0070689.1 MGP_NODShiLtJ_G0029246.1 mouse_genomes_project 5 34817940 34819963 - Spon2 protein_coding retained_intron MGP_NODShiLtJ_T0070690.1 MGP_NODShiLtJ_G0029246.1 mouse_genomes_project 5 34820428 34822195 - MGP_NODShiLtJ_P0070690 Spon2 protein_coding protein_coding MGP_NODShiLtJ_T0072820.1 MGP_NODShiLtJ_G0029663.1 mouse_genomes_project 5 124090695 124117702 + MGP_NODShiLtJ_P0072820 Idua protein_coding protein_coding MGP_NODShiLtJ_T0072821.1 MGP_NODShiLtJ_G0029663.1 mouse_genomes_project 5 124101111 124117707 + MGP_NODShiLtJ_P0072821 Idua protein_coding protein_coding MGP_NODShiLtJ_T0072822.1 MGP_NODShiLtJ_G0029663.1 mouse_genomes_project 5 124101111 124117702 + MGP_NODShiLtJ_P0072822 Idua protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072823.1 MGP_NODShiLtJ_G0029663.1 mouse_genomes_project 5 124101300 124114506 + Idua protein_coding retained_intron MGP_NODShiLtJ_T0072824.1 MGP_NODShiLtJ_G0029663.1 mouse_genomes_project 5 124101316 124117702 + MGP_NODShiLtJ_P0072824 Idua protein_coding protein_coding MGP_NODShiLtJ_T0072825.1 MGP_NODShiLtJ_G0029663.1 mouse_genomes_project 5 124101352 124117549 + MGP_NODShiLtJ_P0072825 Idua protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072826.1 MGP_NODShiLtJ_G0029663.1 mouse_genomes_project 5 124101464 124113002 + Idua protein_coding processed_transcript MGP_NODShiLtJ_T0072831.1 MGP_NODShiLtJ_G0029663.1 mouse_genomes_project 5 124115052 124116459 + Idua protein_coding retained_intron MGP_NODShiLtJ_T0069809.1 MGP_NODShiLtJ_G0029089.1 mouse_genomes_project 5 6114675 6277007 - MGP_NODShiLtJ_P0069809 Rundc3b protein_coding protein_coding MGP_NODShiLtJ_T0069810.1 MGP_NODShiLtJ_G0029089.1 mouse_genomes_project 5 6116606 6277007 - MGP_NODShiLtJ_P0069810 Rundc3b protein_coding protein_coding MGP_NODShiLtJ_T0001427.1 MGP_NODShiLtJ_G0001346.1 mouse_genomes_project 5 14070281 14072677 + TEC TEC MGP_NODShiLtJ_T0072772.1 MGP_NODShiLtJ_G0029654.1 mouse_genomes_project 5 123720472 123756570 + MGP_NODShiLtJ_P0072772 Pigg protein_coding protein_coding MGP_NODShiLtJ_T0072773.1 MGP_NODShiLtJ_G0029654.1 mouse_genomes_project 5 123720472 123757692 + MGP_NODShiLtJ_P0072773 Pigg protein_coding protein_coding MGP_NODShiLtJ_T0072774.1 MGP_NODShiLtJ_G0029654.1 mouse_genomes_project 5 123720499 123756575 + MGP_NODShiLtJ_P0072774 Pigg protein_coding protein_coding MGP_NODShiLtJ_T0008187.1 MGP_NODShiLtJ_G0006662.1 mouse_genomes_project 5 121705978 121784846 - Gm28050 lincRNA lincRNA MGP_NODShiLtJ_T0008188.1 MGP_NODShiLtJ_G0006662.1 mouse_genomes_project 5 121765750 121784849 - Gm28050 lincRNA lincRNA MGP_NODShiLtJ_T0015021.1 MGP_NODShiLtJ_G0013129.1 mouse_genomes_project 5 131704065 131704487 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075733.1 MGP_NODShiLtJ_G0030217.1 mouse_genomes_project 5 171036201 171049294 - MGP_NODShiLtJ_P0075733 Zar1l protein_coding protein_coding MGP_NODShiLtJ_T0074293.1 MGP_NODShiLtJ_G0029934.1 mouse_genomes_project 5 147834270 147834892 - protein_coding retained_intron MGP_NODShiLtJ_T0074294.1 MGP_NODShiLtJ_G0029934.1 mouse_genomes_project 5 147834270 147891762 - MGP_NODShiLtJ_P0074294 protein_coding protein_coding MGP_NODShiLtJ_T0074295.1 MGP_NODShiLtJ_G0029934.1 mouse_genomes_project 5 147834663 147836782 - protein_coding processed_transcript MGP_NODShiLtJ_T0074296.1 MGP_NODShiLtJ_G0029934.1 mouse_genomes_project 5 147843066 147844606 - protein_coding retained_intron MGP_NODShiLtJ_T0015067.1 MGP_NODShiLtJ_G0013175.1 mouse_genomes_project 5 162052585 162052814 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014930.1 MGP_NODShiLtJ_G0013038.1 mouse_genomes_project 5 93991205 93991572 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015056.1 MGP_NODShiLtJ_G0013164.1 mouse_genomes_project 5 156721552 156722294 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071853.1 MGP_NODShiLtJ_G0029439.1 mouse_genomes_project 5 84092436 84093363 - MGP_NODShiLtJ_P0071853 Olfr1151 protein_coding protein_coding MGP_NODShiLtJ_T0014904.1 MGP_NODShiLtJ_G0013012.1 mouse_genomes_project 5 80718789 80719560 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074391.1 MGP_NODShiLtJ_G0029954.1 mouse_genomes_project 5 152448928 152482353 - MGP_NODShiLtJ_P0074391 Wbscr16 protein_coding protein_coding MGP_NODShiLtJ_T0074392.1 MGP_NODShiLtJ_G0029954.1 mouse_genomes_project 5 152458914 152474272 - Wbscr16 protein_coding retained_intron MGP_NODShiLtJ_T0074393.1 MGP_NODShiLtJ_G0029954.1 mouse_genomes_project 5 152469241 152472640 - Wbscr16 protein_coding retained_intron MGP_NODShiLtJ_T0100599.1 MGP_NODShiLtJ_G0038993.1 mouse_genomes_project 5 5838833 5838977 + Gm23993 snoRNA snoRNA MGP_NODShiLtJ_T0008367.1 MGP_NODShiLtJ_G0006778.1 mouse_genomes_project 5 166779449 166780324 + 4930573C15Rik lincRNA lincRNA MGP_NODShiLtJ_T0011719.1 MGP_NODShiLtJ_G0009831.1 mouse_genomes_project 5 105545722 105552737 - MGP_NODShiLtJ_P0011719 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011720.1 MGP_NODShiLtJ_G0009831.1 mouse_genomes_project 5 105545725 105550524 - MGP_NODShiLtJ_P0011720 polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0071705.1 MGP_NODShiLtJ_G0029414.1 mouse_genomes_project 5 80994935 81206415 - MGP_NODShiLtJ_P0071705 Corin protein_coding protein_coding MGP_NODShiLtJ_T0071706.1 MGP_NODShiLtJ_G0029414.1 mouse_genomes_project 5 80994936 81206150 - MGP_NODShiLtJ_P0071706 Corin protein_coding protein_coding MGP_NODShiLtJ_T0071707.1 MGP_NODShiLtJ_G0029414.1 mouse_genomes_project 5 80996396 81206375 - MGP_NODShiLtJ_P0071707 Corin protein_coding protein_coding MGP_NODShiLtJ_T0071708.1 MGP_NODShiLtJ_G0029414.1 mouse_genomes_project 5 80996396 81206381 - MGP_NODShiLtJ_P0071708 Corin protein_coding protein_coding MGP_NODShiLtJ_T0071709.1 MGP_NODShiLtJ_G0029414.1 mouse_genomes_project 5 80996408 81206381 - MGP_NODShiLtJ_P0071709 Corin protein_coding protein_coding MGP_NODShiLtJ_T0071710.1 MGP_NODShiLtJ_G0029414.1 mouse_genomes_project 5 81049883 81057003 - Corin protein_coding retained_intron MGP_NODShiLtJ_T0071711.1 MGP_NODShiLtJ_G0029414.1 mouse_genomes_project 5 81054687 81078480 - Corin protein_coding processed_transcript MGP_NODShiLtJ_T0074330.1 MGP_NODShiLtJ_G0029943.1 mouse_genomes_project 5 148168454 148179384 + MGP_NODShiLtJ_P0074330 Kctd7 protein_coding protein_coding MGP_NODShiLtJ_T0074331.1 MGP_NODShiLtJ_G0029943.1 mouse_genomes_project 5 148168517 148175310 + MGP_NODShiLtJ_P0074331 Kctd7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074332.1 MGP_NODShiLtJ_G0029943.1 mouse_genomes_project 5 148168697 148176072 + MGP_NODShiLtJ_P0074332 Kctd7 protein_coding protein_coding MGP_NODShiLtJ_T0011484.1 MGP_NODShiLtJ_G0009617.1 mouse_genomes_project 5 41436305 41436551 + Gm25505 misc_RNA misc_RNA MGP_NODShiLtJ_T0001435.1 MGP_NODShiLtJ_G0001354.1 mouse_genomes_project 5 21474110 21477632 + TEC TEC MGP_NODShiLtJ_T0008294.1 MGP_NODShiLtJ_G0006729.1 mouse_genomes_project 5 141668969 141670125 - Gm16001 lincRNA lincRNA MGP_NODShiLtJ_T0008295.1 MGP_NODShiLtJ_G0006729.1 mouse_genomes_project 5 141668998 141670078 - Gm16001 lincRNA lincRNA MGP_NODShiLtJ_T0071854.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84104678 84137603 + MGP_NODShiLtJ_P0071854 Pdgfra protein_coding protein_coding MGP_NODShiLtJ_T0071855.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84104692 84153109 + MGP_NODShiLtJ_P0071855 Pdgfra protein_coding protein_coding MGP_NODShiLtJ_T0071856.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84104738 84129231 + MGP_NODShiLtJ_P0071856 Pdgfra protein_coding non_stop_decay MGP_NODShiLtJ_T0071857.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84105320 84138217 + MGP_NODShiLtJ_P0071857 Pdgfra protein_coding protein_coding MGP_NODShiLtJ_T0071858.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84105971 84115651 + Pdgfra protein_coding retained_intron MGP_NODShiLtJ_T0071859.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84107467 84116680 + MGP_NODShiLtJ_P0071859 Pdgfra protein_coding protein_coding MGP_NODShiLtJ_T0071860.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84108224 84153095 + MGP_NODShiLtJ_P0071860 Pdgfra protein_coding protein_coding MGP_NODShiLtJ_T0071861.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84109162 84119475 + MGP_NODShiLtJ_P0071861 Pdgfra protein_coding protein_coding MGP_NODShiLtJ_T0071862.1 MGP_NODShiLtJ_G0029440.1 mouse_genomes_project 5 84114764 84120852 + MGP_NODShiLtJ_P0071862 Pdgfra protein_coding protein_coding MGP_NODShiLtJ_T0074406.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547717 152628712 - MGP_NODShiLtJ_P0074406 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074407.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547720 152628699 - MGP_NODShiLtJ_P0074407 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074408.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547720 152628699 - MGP_NODShiLtJ_P0074408 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074409.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547722 152627796 - MGP_NODShiLtJ_P0074409 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074410.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547725 152607461 - MGP_NODShiLtJ_P0074410 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074411.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547725 152607461 - MGP_NODShiLtJ_P0074411 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074412.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547725 152607461 - MGP_NODShiLtJ_P0074412 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074413.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547725 152627796 - MGP_NODShiLtJ_P0074413 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074414.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547725 152607461 - MGP_NODShiLtJ_P0074414 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074415.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152547726 152590802 - Gtf2i protein_coding processed_transcript MGP_NODShiLtJ_T0074416.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152548380 152553446 - MGP_NODShiLtJ_P0074416 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074417.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152548726 152552295 - Gtf2i protein_coding retained_intron MGP_NODShiLtJ_T0074418.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152549396 152607407 - MGP_NODShiLtJ_P0074418 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074419.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152549538 152550929 - Gtf2i protein_coding retained_intron MGP_NODShiLtJ_T0074420.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152550520 152554636 - Gtf2i protein_coding retained_intron MGP_NODShiLtJ_T0074421.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152552635 152553628 - Gtf2i protein_coding retained_intron MGP_NODShiLtJ_T0074422.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152565712 152583557 - Gtf2i protein_coding retained_intron MGP_NODShiLtJ_T0074423.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152565738 152607357 - MGP_NODShiLtJ_P0074423 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074424.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152567931 152569260 - Gtf2i protein_coding processed_transcript MGP_NODShiLtJ_T0074425.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152569025 152576724 - Gtf2i protein_coding processed_transcript MGP_NODShiLtJ_T0074426.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152573483 152585963 - Gtf2i protein_coding processed_transcript MGP_NODShiLtJ_T0074427.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152597845 152627582 - MGP_NODShiLtJ_P0074427 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074428.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152597876 152625240 - MGP_NODShiLtJ_P0074428 Gtf2i protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074429.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152597876 152624945 - MGP_NODShiLtJ_P0074429 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074430.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152597902 152627796 - MGP_NODShiLtJ_P0074430 Gtf2i protein_coding protein_coding MGP_NODShiLtJ_T0074431.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152597956 152627796 - MGP_NODShiLtJ_P0074431 Gtf2i protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074432.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152600164 152619827 - Gtf2i protein_coding retained_intron MGP_NODShiLtJ_T0074433.1 MGP_NODShiLtJ_G0029957.1 mouse_genomes_project 5 152606809 152608973 - Gtf2i protein_coding retained_intron MGP_NODShiLtJ_T0001752.1 MGP_NODShiLtJ_G0001666.1 mouse_genomes_project 5 135565538 135568216 + TEC TEC MGP_NODShiLtJ_T0008133.1 MGP_NODShiLtJ_G0006622.1 mouse_genomes_project 5 105044761 105046765 - Gm43688 lincRNA lincRNA MGP_NODShiLtJ_T0014825.1 MGP_NODShiLtJ_G0012933.1 mouse_genomes_project 5 35327103 35327353 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004653.1 MGP_NODShiLtJ_G0004025.1 mouse_genomes_project 5 75480990 75555123 + Gm15477 antisense antisense MGP_NODShiLtJ_T0004654.1 MGP_NODShiLtJ_G0004025.1 mouse_genomes_project 5 75481060 75550587 + Gm15477 antisense antisense MGP_NODShiLtJ_T0015034.1 MGP_NODShiLtJ_G0013142.1 mouse_genomes_project 5 140487389 140487847 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070940.1 MGP_NODShiLtJ_G0029282.1 mouse_genomes_project 5 37225694 37237649 + MGP_NODShiLtJ_P0070940 Hmx1 protein_coding protein_coding MGP_NODShiLtJ_T0070941.1 MGP_NODShiLtJ_G0029282.1 mouse_genomes_project 5 37225703 37229476 + MGP_NODShiLtJ_P0070941 Hmx1 protein_coding protein_coding MGP_NODShiLtJ_T0004670.1 MGP_NODShiLtJ_G0004039.1 mouse_genomes_project 5 100446906 100461547 - antisense antisense MGP_NODShiLtJ_T0001755.1 MGP_NODShiLtJ_G0001669.1 mouse_genomes_project 5 137211969 137213116 + TEC TEC MGP_NODShiLtJ_T0099348.1 MGP_NODShiLtJ_G0037742.1 mouse_genomes_project 5 40546352 40546488 + Gm22249 snRNA snRNA MGP_NODShiLtJ_T0001600.1 MGP_NODShiLtJ_G0001515.1 mouse_genomes_project 5 73109670 73111222 - TEC TEC MGP_NODShiLtJ_T0004814.1 MGP_NODShiLtJ_G0004137.1 mouse_genomes_project 5 158102652 158109061 + 6330403L08Rik antisense antisense MGP_NODShiLtJ_T0004815.1 MGP_NODShiLtJ_G0004137.1 mouse_genomes_project 5 158102652 158109062 + 6330403L08Rik antisense antisense MGP_NODShiLtJ_T0001782.1 MGP_NODShiLtJ_G0001696.1 mouse_genomes_project 5 141845398 141847004 - TEC TEC MGP_NODShiLtJ_T0071809.1 MGP_NODShiLtJ_G0029432.1 mouse_genomes_project 5 82873540 82947064 - MGP_NODShiLtJ_P0071809 Usp46 protein_coding protein_coding MGP_NODShiLtJ_T0071810.1 MGP_NODShiLtJ_G0029432.1 mouse_genomes_project 5 82873812 82947075 - MGP_NODShiLtJ_P0071810 Usp46 protein_coding protein_coding MGP_NODShiLtJ_T0071811.1 MGP_NODShiLtJ_G0029432.1 mouse_genomes_project 5 82876890 82911562 - Usp46 protein_coding processed_transcript MGP_NODShiLtJ_T0071812.1 MGP_NODShiLtJ_G0029432.1 mouse_genomes_project 5 82902123 82905200 - MGP_NODShiLtJ_P0071812 Usp46 protein_coding protein_coding MGP_NODShiLtJ_T0071813.1 MGP_NODShiLtJ_G0029432.1 mouse_genomes_project 5 82905101 82908407 - Usp46 protein_coding retained_intron MGP_NODShiLtJ_T0071814.1 MGP_NODShiLtJ_G0029432.1 mouse_genomes_project 5 82905147 82944386 - MGP_NODShiLtJ_P0071814 Usp46 protein_coding protein_coding MGP_NODShiLtJ_T0070419.1 MGP_NODShiLtJ_G0029207.1 mouse_genomes_project 5 32248429 32260393 - MGP_NODShiLtJ_P0070419 Slc5a6 protein_coding protein_coding MGP_NODShiLtJ_T0070420.1 MGP_NODShiLtJ_G0029207.1 mouse_genomes_project 5 32248429 32262700 - MGP_NODShiLtJ_P0070420 Slc5a6 protein_coding protein_coding MGP_NODShiLtJ_T0070421.1 MGP_NODShiLtJ_G0029207.1 mouse_genomes_project 5 32248429 32262338 - MGP_NODShiLtJ_P0070421 Slc5a6 protein_coding protein_coding MGP_NODShiLtJ_T0070422.1 MGP_NODShiLtJ_G0029207.1 mouse_genomes_project 5 32248430 32260400 - MGP_NODShiLtJ_P0070422 Slc5a6 protein_coding protein_coding MGP_NODShiLtJ_T0070423.1 MGP_NODShiLtJ_G0029207.1 mouse_genomes_project 5 32249280 32250387 - Slc5a6 protein_coding retained_intron MGP_NODShiLtJ_T0070424.1 MGP_NODShiLtJ_G0029207.1 mouse_genomes_project 5 32251744 32254996 - MGP_NODShiLtJ_P0070424 Slc5a6 protein_coding protein_coding MGP_NODShiLtJ_T0070425.1 MGP_NODShiLtJ_G0029207.1 mouse_genomes_project 5 32255485 32260470 - MGP_NODShiLtJ_P0070425 Slc5a6 protein_coding protein_coding MGP_NODShiLtJ_T0015062.1 MGP_NODShiLtJ_G0013170.1 mouse_genomes_project 5 158871822 158872198 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071423.1 MGP_NODShiLtJ_G0029368.1 mouse_genomes_project 5 71357744 71393317 + MGP_NODShiLtJ_P0071423 Pgm1 protein_coding protein_coding MGP_NODShiLtJ_T0071424.1 MGP_NODShiLtJ_G0029368.1 mouse_genomes_project 5 71368958 71377001 + MGP_NODShiLtJ_P0071424 Pgm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071425.1 MGP_NODShiLtJ_G0029368.1 mouse_genomes_project 5 71372803 71374680 + Pgm1 protein_coding retained_intron MGP_NODShiLtJ_T0071426.1 MGP_NODShiLtJ_G0029368.1 mouse_genomes_project 5 71379371 71393130 + MGP_NODShiLtJ_P0071426 Pgm1 protein_coding protein_coding MGP_NODShiLtJ_T0073823.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140160441 140195247 - MGP_NODShiLtJ_P0073823 Anapc5 protein_coding protein_coding MGP_NODShiLtJ_T0073824.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140160709 140196348 - MGP_NODShiLtJ_P0073824 Anapc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073825.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140160709 140196355 - MGP_NODShiLtJ_P0073825 Anapc5 protein_coding protein_coding MGP_NODShiLtJ_T0073826.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140160709 140196355 - MGP_NODShiLtJ_P0073826 Anapc5 protein_coding protein_coding MGP_NODShiLtJ_T0073827.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140160711 140196348 - MGP_NODShiLtJ_P0073827 Anapc5 protein_coding protein_coding MGP_NODShiLtJ_T0073828.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140160719 140196362 - MGP_NODShiLtJ_P0073828 Anapc5 protein_coding protein_coding MGP_NODShiLtJ_T0073829.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140160903 140166494 - MGP_NODShiLtJ_P0073829 Anapc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073830.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140161403 140173214 - Anapc5 protein_coding retained_intron MGP_NODShiLtJ_T0073831.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140164831 140167446 - MGP_NODShiLtJ_P0073831 Anapc5 protein_coding protein_coding MGP_NODShiLtJ_T0073832.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140166415 140175950 - Anapc5 protein_coding retained_intron MGP_NODShiLtJ_T0073833.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140172878 140180827 - MGP_NODShiLtJ_P0073833 Anapc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073834.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140172953 140192680 - Anapc5 protein_coding processed_transcript MGP_NODShiLtJ_T0073835.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140173578 140179835 - Anapc5 protein_coding retained_intron MGP_NODShiLtJ_T0073836.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140173762 140196347 - Anapc5 protein_coding retained_intron MGP_NODShiLtJ_T0073837.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140179327 140195115 - Anapc5 protein_coding retained_intron MGP_NODShiLtJ_T0073838.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140180812 140196338 - MGP_NODShiLtJ_P0073838 Anapc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073839.1 MGP_NODShiLtJ_G0029858.1 mouse_genomes_project 5 140191953 140196343 - Anapc5 protein_coding processed_transcript MGP_NODShiLtJ_T0001799.1 MGP_NODShiLtJ_G0001712.1 mouse_genomes_project 5 147546446 147548662 + TEC TEC MGP_NODShiLtJ_T0008126.1 MGP_NODShiLtJ_G0006615.1 mouse_genomes_project 5 100551308 100556745 + BC037156 lincRNA lincRNA MGP_NODShiLtJ_T0074032.1 MGP_NODShiLtJ_G0029889.1 mouse_genomes_project 5 141675307 141676261 + MGP_NODShiLtJ_P0074032 Arl6ip4 protein_coding protein_coding MGP_NODShiLtJ_T0074033.1 MGP_NODShiLtJ_G0029889.1 mouse_genomes_project 5 141675317 141677415 + MGP_NODShiLtJ_P0074033 Arl6ip4 protein_coding protein_coding MGP_NODShiLtJ_T0074034.1 MGP_NODShiLtJ_G0029889.1 mouse_genomes_project 5 141675340 141677315 + MGP_NODShiLtJ_P0074034 Arl6ip4 protein_coding protein_coding MGP_NODShiLtJ_T0074035.1 MGP_NODShiLtJ_G0029889.1 mouse_genomes_project 5 141675897 141677253 + MGP_NODShiLtJ_P0074035 Arl6ip4 protein_coding protein_coding MGP_NODShiLtJ_T0074036.1 MGP_NODShiLtJ_G0029889.1 mouse_genomes_project 5 141676529 141677410 + MGP_NODShiLtJ_P0074036 Arl6ip4 protein_coding protein_coding MGP_NODShiLtJ_T0010578.1 MGP_NODShiLtJ_G0008711.1 mouse_genomes_project 5 71373769 71373865 - Gm22395 miRNA miRNA MGP_NODShiLtJ_T0001421.1 MGP_NODShiLtJ_G0001340.1 mouse_genomes_project 5 12673450 12675307 - TEC TEC MGP_NODShiLtJ_T0004716.1 MGP_NODShiLtJ_G0004069.1 mouse_genomes_project 5 126772298 126781647 + Gm15559 antisense antisense MGP_NODShiLtJ_T0071958.1 MGP_NODShiLtJ_G0029456.1 mouse_genomes_project 5 86097130 86148934 + MGP_NODShiLtJ_P0071958 Thegl protein_coding protein_coding MGP_NODShiLtJ_T0071959.1 MGP_NODShiLtJ_G0029456.1 mouse_genomes_project 5 86097130 86148941 + MGP_NODShiLtJ_P0071959 Thegl protein_coding protein_coding MGP_NODShiLtJ_T0071960.1 MGP_NODShiLtJ_G0029456.1 mouse_genomes_project 5 86119270 86129763 + MGP_NODShiLtJ_P0071960 Thegl protein_coding protein_coding MGP_NODShiLtJ_T0004595.1 MGP_NODShiLtJ_G0003978.1 mouse_genomes_project 5 31708051 31729933 + antisense antisense MGP_NODShiLtJ_T0004596.1 MGP_NODShiLtJ_G0003978.1 mouse_genomes_project 5 31708094 31733286 + antisense antisense MGP_NODShiLtJ_T0101975.1 MGP_NODShiLtJ_G0040143.1 mouse_genomes_project 5 172311447 172311535 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0069995.1 MGP_NODShiLtJ_G0029126.1 mouse_genomes_project 5 22301411 22363910 - MGP_NODShiLtJ_P0069995 Slc26a5 protein_coding protein_coding MGP_NODShiLtJ_T0069996.1 MGP_NODShiLtJ_G0029126.1 mouse_genomes_project 5 22301411 22360321 - MGP_NODShiLtJ_P0069996 Slc26a5 protein_coding protein_coding MGP_NODShiLtJ_T0069997.1 MGP_NODShiLtJ_G0029126.1 mouse_genomes_project 5 22301774 22345685 - MGP_NODShiLtJ_P0069997 Slc26a5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069998.1 MGP_NODShiLtJ_G0029126.1 mouse_genomes_project 5 22301905 22345637 - MGP_NODShiLtJ_P0069998 Slc26a5 protein_coding protein_coding MGP_NODShiLtJ_T0069999.1 MGP_NODShiLtJ_G0029126.1 mouse_genomes_project 5 22310916 22315742 - Slc26a5 protein_coding retained_intron MGP_NODShiLtJ_T0099362.1 MGP_NODShiLtJ_G0037756.1 mouse_genomes_project 5 84337046 84337151 - Gm22084 snRNA snRNA MGP_NODShiLtJ_T0001540.1 MGP_NODShiLtJ_G0001456.1 mouse_genomes_project 5 52547030 52549921 - TEC TEC MGP_NODShiLtJ_T0015038.1 MGP_NODShiLtJ_G0013146.1 mouse_genomes_project 5 143676298 143676831 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001817.1 MGP_NODShiLtJ_G0001730.1 mouse_genomes_project 5 150107125 150110122 - TEC TEC MGP_NODShiLtJ_T0015000.1 MGP_NODShiLtJ_G0013108.1 mouse_genomes_project 5 124530719 124531437 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070022.1 MGP_NODShiLtJ_G0029129.1 mouse_genomes_project 5 23289748 23888871 + MGP_NODShiLtJ_P0070022 Lhfpl3 protein_coding protein_coding MGP_NODShiLtJ_T0070024.1 MGP_NODShiLtJ_G0029129.1 mouse_genomes_project 5 23701447 23888862 + MGP_NODShiLtJ_P0070024 Lhfpl3 protein_coding protein_coding MGP_NODShiLtJ_T0014732.1 MGP_NODShiLtJ_G0012840.1 mouse_genomes_project 5 5620053 5620464 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073232.1 MGP_NODShiLtJ_G0029746.1 mouse_genomes_project 5 131123398 131154500 + MGP_NODShiLtJ_P0073232 Ankrd13a protein_coding protein_coding MGP_NODShiLtJ_T0073233.1 MGP_NODShiLtJ_G0029746.1 mouse_genomes_project 5 131123666 131154868 + Ankrd13a protein_coding processed_transcript MGP_NODShiLtJ_T0073234.1 MGP_NODShiLtJ_G0029746.1 mouse_genomes_project 5 131134734 131152289 + MGP_NODShiLtJ_P0073234 Ankrd13a protein_coding protein_coding MGP_NODShiLtJ_T0073235.1 MGP_NODShiLtJ_G0029746.1 mouse_genomes_project 5 131144432 131154868 + Ankrd13a protein_coding processed_transcript MGP_NODShiLtJ_T0073236.1 MGP_NODShiLtJ_G0029746.1 mouse_genomes_project 5 131148134 131154868 + Ankrd13a protein_coding processed_transcript MGP_NODShiLtJ_T0073237.1 MGP_NODShiLtJ_G0029746.1 mouse_genomes_project 5 131148248 131150241 + Ankrd13a protein_coding retained_intron MGP_NODShiLtJ_T0071894.1 MGP_NODShiLtJ_G0029447.1 mouse_genomes_project 5 85359283 85391893 - MGP_NODShiLtJ_P0071894 protein_coding protein_coding MGP_NODShiLtJ_T0015047.1 MGP_NODShiLtJ_G0013155.1 mouse_genomes_project 5 154753134 154753909 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004649.1 MGP_NODShiLtJ_G0004021.1 mouse_genomes_project 5 74534605 74536993 - Gm15948 antisense antisense MGP_NODShiLtJ_T0008040.1 MGP_NODShiLtJ_G0006545.1 mouse_genomes_project 5 41322807 41393205 - Gm43453 lincRNA lincRNA MGP_NODShiLtJ_T0001829.1 MGP_NODShiLtJ_G0001742.1 mouse_genomes_project 5 150680195 150682355 - TEC TEC MGP_NODShiLtJ_T0074264.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713475 147720533 + MGP_NODShiLtJ_P0074264 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074265.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713481 147716461 + MGP_NODShiLtJ_P0074265 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074266.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713482 147716378 + MGP_NODShiLtJ_P0074266 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074267.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713487 147716000 + MGP_NODShiLtJ_P0074267 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074268.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713489 147716857 + MGP_NODShiLtJ_P0074268 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074269.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713494 147716674 + MGP_NODShiLtJ_P0074269 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074270.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713496 147715324 + Mrps17 protein_coding retained_intron MGP_NODShiLtJ_T0074271.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713512 147716035 + MGP_NODShiLtJ_P0074271 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074272.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713536 147716271 + MGP_NODShiLtJ_P0074272 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074273.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713555 147716428 + MGP_NODShiLtJ_P0074273 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0074274.1 MGP_NODShiLtJ_G0029930.1 mouse_genomes_project 5 147713675 147714812 + MGP_NODShiLtJ_P0074274 Mrps17 protein_coding protein_coding MGP_NODShiLtJ_T0072594.1 MGP_NODShiLtJ_G0029613.1 mouse_genomes_project 5 119077176 119090549 + MGP_NODShiLtJ_P0072594 Ibsp protein_coding protein_coding MGP_NODShiLtJ_T0073254.1 MGP_NODShiLtJ_G0029752.1 mouse_genomes_project 5 131314937 131330430 + MGP_NODShiLtJ_P0073254 Oasl1 protein_coding protein_coding MGP_NODShiLtJ_T0073255.1 MGP_NODShiLtJ_G0029752.1 mouse_genomes_project 5 131314961 131330433 + MGP_NODShiLtJ_P0073255 Oasl1 protein_coding protein_coding MGP_NODShiLtJ_T0073256.1 MGP_NODShiLtJ_G0029752.1 mouse_genomes_project 5 131315119 131327960 + Oasl1 protein_coding processed_transcript MGP_NODShiLtJ_T0073257.1 MGP_NODShiLtJ_G0029752.1 mouse_genomes_project 5 131315132 131328052 + Oasl1 protein_coding processed_transcript MGP_NODShiLtJ_T0073258.1 MGP_NODShiLtJ_G0029752.1 mouse_genomes_project 5 131321554 131325191 + Oasl1 protein_coding retained_intron MGP_NODShiLtJ_T0073259.1 MGP_NODShiLtJ_G0029752.1 mouse_genomes_project 5 131328009 131330205 + Oasl1 protein_coding processed_transcript MGP_NODShiLtJ_T0001625.1 MGP_NODShiLtJ_G0001540.1 mouse_genomes_project 5 75223607 75224217 - TEC TEC MGP_NODShiLtJ_T0074059.1 MGP_NODShiLtJ_G0029892.1 mouse_genomes_project 5 141900388 141912379 + MGP_NODShiLtJ_P0074059 2810006K23Rik protein_coding protein_coding MGP_NODShiLtJ_T0074060.1 MGP_NODShiLtJ_G0029892.1 mouse_genomes_project 5 141900397 141914101 + MGP_NODShiLtJ_P0074060 2810006K23Rik protein_coding protein_coding MGP_NODShiLtJ_T0098410.1 MGP_NODShiLtJ_G0036815.1 mouse_genomes_project 5 139761755 139764396 + Gm42829 sense_intronic sense_intronic MGP_NODShiLtJ_T0001597.1 MGP_NODShiLtJ_G0001512.1 mouse_genomes_project 5 72954640 72956400 + TEC TEC MGP_NODShiLtJ_T0075670.1 MGP_NODShiLtJ_G0030208.1 mouse_genomes_project 5 169578057 169609262 + MGP_NODShiLtJ_P0075670 Uspl1 protein_coding protein_coding MGP_NODShiLtJ_T0075671.1 MGP_NODShiLtJ_G0030208.1 mouse_genomes_project 5 169578068 169587718 + MGP_NODShiLtJ_P0075671 Uspl1 protein_coding protein_coding MGP_NODShiLtJ_T0075672.1 MGP_NODShiLtJ_G0030208.1 mouse_genomes_project 5 169578068 169609262 + MGP_NODShiLtJ_P0075672 Uspl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075673.1 MGP_NODShiLtJ_G0030208.1 mouse_genomes_project 5 169578171 169587485 + Uspl1 protein_coding processed_transcript MGP_NODShiLtJ_T0075674.1 MGP_NODShiLtJ_G0030208.1 mouse_genomes_project 5 169579643 169582395 + Uspl1 protein_coding retained_intron MGP_NODShiLtJ_T0075675.1 MGP_NODShiLtJ_G0030208.1 mouse_genomes_project 5 169581165 169609093 + MGP_NODShiLtJ_P0075675 Uspl1 protein_coding protein_coding MGP_NODShiLtJ_T0075676.1 MGP_NODShiLtJ_G0030208.1 mouse_genomes_project 5 169582249 169583531 + Uspl1 protein_coding retained_intron MGP_NODShiLtJ_T0075677.1 MGP_NODShiLtJ_G0030208.1 mouse_genomes_project 5 169584726 169609266 + Uspl1 protein_coding retained_intron MGP_NODShiLtJ_T0014949.1 MGP_NODShiLtJ_G0013057.1 mouse_genomes_project 5 102368142 102368968 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072559.1 MGP_NODShiLtJ_G0029603.1 mouse_genomes_project 5 118348188 118359311 - MGP_NODShiLtJ_P0072559 1700016H13Rik protein_coding protein_coding MGP_NODShiLtJ_T0072560.1 MGP_NODShiLtJ_G0029603.1 mouse_genomes_project 5 118348578 118359033 - MGP_NODShiLtJ_P0072560 1700016H13Rik protein_coding protein_coding MGP_NODShiLtJ_T0072561.1 MGP_NODShiLtJ_G0029603.1 mouse_genomes_project 5 118348736 118359024 - MGP_NODShiLtJ_P0072561 1700016H13Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072562.1 MGP_NODShiLtJ_G0029603.1 mouse_genomes_project 5 118348742 118359049 - MGP_NODShiLtJ_P0072562 1700016H13Rik protein_coding protein_coding MGP_NODShiLtJ_T0072563.1 MGP_NODShiLtJ_G0029603.1 mouse_genomes_project 5 118348847 118359024 - MGP_NODShiLtJ_P0072563 1700016H13Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072564.1 MGP_NODShiLtJ_G0029603.1 mouse_genomes_project 5 118348920 118359024 - MGP_NODShiLtJ_P0072564 1700016H13Rik protein_coding protein_coding MGP_NODShiLtJ_T0072565.1 MGP_NODShiLtJ_G0029603.1 mouse_genomes_project 5 118348920 118359025 - MGP_NODShiLtJ_P0072565 1700016H13Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001549.1 MGP_NODShiLtJ_G0001465.1 mouse_genomes_project 5 54513043 54516271 + TEC TEC MGP_NODShiLtJ_T0073912.1 MGP_NODShiLtJ_G0029870.1 mouse_genomes_project 5 140875489 140936017 + MGP_NODShiLtJ_P0073912 Mlxip protein_coding protein_coding MGP_NODShiLtJ_T0073913.1 MGP_NODShiLtJ_G0029870.1 mouse_genomes_project 5 140875491 140947030 + MGP_NODShiLtJ_P0073913 Mlxip protein_coding protein_coding MGP_NODShiLtJ_T0073914.1 MGP_NODShiLtJ_G0029870.1 mouse_genomes_project 5 140927165 140947027 + MGP_NODShiLtJ_P0073914 Mlxip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073915.1 MGP_NODShiLtJ_G0029870.1 mouse_genomes_project 5 140940553 140942649 + Mlxip protein_coding processed_transcript MGP_NODShiLtJ_T0074683.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154659300 154674842 - MGP_NODShiLtJ_P0074683 Lrwd1 protein_coding protein_coding MGP_NODShiLtJ_T0074684.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154659595 154674769 - Lrwd1 protein_coding retained_intron MGP_NODShiLtJ_T0074685.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154659603 154662088 - Lrwd1 protein_coding retained_intron MGP_NODShiLtJ_T0074686.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154660220 154666827 - MGP_NODShiLtJ_P0074686 Lrwd1 protein_coding protein_coding MGP_NODShiLtJ_T0074687.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154665929 154674790 - Lrwd1 protein_coding retained_intron MGP_NODShiLtJ_T0074688.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154667257 154674770 - Lrwd1 protein_coding retained_intron MGP_NODShiLtJ_T0074689.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154668249 154674830 - Lrwd1 protein_coding retained_intron MGP_NODShiLtJ_T0074690.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154668881 154670452 - Lrwd1 protein_coding retained_intron MGP_NODShiLtJ_T0074691.1 MGP_NODShiLtJ_G0030003.1 mouse_genomes_project 5 154669606 154674765 - MGP_NODShiLtJ_P0074691 Lrwd1 protein_coding protein_coding MGP_NODShiLtJ_T0071509.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948429 73024029 + MGP_NODShiLtJ_P0071509 Ube2k protein_coding protein_coding MGP_NODShiLtJ_T0071510.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948457 73019141 + MGP_NODShiLtJ_P0071510 Ube2k protein_coding protein_coding MGP_NODShiLtJ_T0071511.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948472 73019141 + MGP_NODShiLtJ_P0071511 Ube2k protein_coding protein_coding MGP_NODShiLtJ_T0071512.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948487 73019141 + MGP_NODShiLtJ_P0071512 Ube2k protein_coding protein_coding MGP_NODShiLtJ_T0071513.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948487 73022279 + MGP_NODShiLtJ_P0071513 Ube2k protein_coding protein_coding MGP_NODShiLtJ_T0071514.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948516 73022279 + MGP_NODShiLtJ_P0071514 Ube2k protein_coding protein_coding MGP_NODShiLtJ_T0071515.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948530 73018531 + MGP_NODShiLtJ_P0071515 Ube2k protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071516.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948558 73017934 + MGP_NODShiLtJ_P0071516 Ube2k protein_coding protein_coding MGP_NODShiLtJ_T0071517.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 72948680 73019414 + MGP_NODShiLtJ_P0071517 Ube2k protein_coding protein_coding MGP_NODShiLtJ_T0071518.1 MGP_NODShiLtJ_G0029384.1 mouse_genomes_project 5 73014981 73018531 + Ube2k protein_coding retained_intron MGP_NODShiLtJ_T0075441.1 MGP_NODShiLtJ_G0030156.1 mouse_genomes_project 5 164483383 164493345 - Smurf1 protein_coding retained_intron MGP_NODShiLtJ_T0075442.1 MGP_NODShiLtJ_G0030156.1 mouse_genomes_project 5 164483383 164575070 - MGP_NODShiLtJ_P0075442 Smurf1 protein_coding protein_coding MGP_NODShiLtJ_T0075443.1 MGP_NODShiLtJ_G0030156.1 mouse_genomes_project 5 164483390 164575078 - MGP_NODShiLtJ_P0075443 Smurf1 protein_coding protein_coding MGP_NODShiLtJ_T0075444.1 MGP_NODShiLtJ_G0030156.1 mouse_genomes_project 5 164485977 164575078 - MGP_NODShiLtJ_P0075444 Smurf1 protein_coding protein_coding MGP_NODShiLtJ_T0075445.1 MGP_NODShiLtJ_G0030156.1 mouse_genomes_project 5 164491458 164506564 - MGP_NODShiLtJ_P0075445 Smurf1 protein_coding protein_coding MGP_NODShiLtJ_T0073241.1 MGP_NODShiLtJ_G0029750.1 mouse_genomes_project 5 131245062 131247987 - MGP_NODShiLtJ_P0073241 Gm9936 protein_coding protein_coding MGP_NODShiLtJ_T0018019.1 MGP_NODShiLtJ_G0015473.1 mouse_genomes_project 5 121765957 121912268 - Gm28039 processed_transcript processed_transcript MGP_NODShiLtJ_T0008195.1 MGP_NODShiLtJ_G0006669.1 mouse_genomes_project 5 123775693 123776168 - Gm42517 lincRNA lincRNA MGP_NODShiLtJ_T0074502.1 MGP_NODShiLtJ_G0029967.1 mouse_genomes_project 5 153287968 153289246 - MGP_NODShiLtJ_P0074502 Cldn13 protein_coding protein_coding MGP_NODShiLtJ_T0004703.1 MGP_NODShiLtJ_G0004058.1 mouse_genomes_project 5 118867145 118873941 + Gm26703 antisense antisense MGP_NODShiLtJ_T0004704.1 MGP_NODShiLtJ_G0004058.1 mouse_genomes_project 5 118867219 118868855 + Gm26703 antisense antisense MGP_NODShiLtJ_T0004705.1 MGP_NODShiLtJ_G0004058.1 mouse_genomes_project 5 118871813 118877505 + Gm26703 antisense antisense MGP_NODShiLtJ_T0070300.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31320027 31357602 - MGP_NODShiLtJ_P0070300 Hadha protein_coding protein_coding MGP_NODShiLtJ_T0070301.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31321149 31357416 - Hadha protein_coding processed_transcript MGP_NODShiLtJ_T0070302.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31321622 31322029 - Hadha protein_coding processed_transcript MGP_NODShiLtJ_T0070303.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31323192 31328843 - Hadha protein_coding retained_intron MGP_NODShiLtJ_T0070304.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31328459 31337506 - MGP_NODShiLtJ_P0070304 Hadha protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070305.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31330438 31343491 - Hadha protein_coding retained_intron MGP_NODShiLtJ_T0070306.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31335698 31357402 - Hadha protein_coding retained_intron MGP_NODShiLtJ_T0070307.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31349547 31352007 - Hadha protein_coding retained_intron MGP_NODShiLtJ_T0070308.1 MGP_NODShiLtJ_G0029186.1 mouse_genomes_project 5 31356361 31357430 - Hadha protein_coding retained_intron MGP_NODShiLtJ_T0099391.1 MGP_NODShiLtJ_G0037785.1 mouse_genomes_project 5 134743848 134743955 - Gm25343 snRNA snRNA MGP_NODShiLtJ_T0001477.1 MGP_NODShiLtJ_G0001393.1 mouse_genomes_project 5 37393281 37395986 - TEC TEC MGP_NODShiLtJ_T0075527.1 MGP_NODShiLtJ_G0030177.1 mouse_genomes_project 5 166201111 166206972 - MGP_NODShiLtJ_P0075527 Gm3402 protein_coding protein_coding MGP_NODShiLtJ_T0075532.1 MGP_NODShiLtJ_G0030177.1 mouse_genomes_project 5 166201288 166206972 - MGP_NODShiLtJ_P0075532 Gm3402 protein_coding protein_coding MGP_NODShiLtJ_T0001554.1 MGP_NODShiLtJ_G0001470.1 mouse_genomes_project 5 55681854 55686266 - TEC TEC MGP_NODShiLtJ_T0004642.1 MGP_NODShiLtJ_G0004015.1 mouse_genomes_project 5 71182069 71183139 + Gm15819 antisense antisense MGP_NODShiLtJ_T0070475.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32386753 32412890 - Gtf3c2 protein_coding retained_intron MGP_NODShiLtJ_T0070476.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32386753 32412902 - MGP_NODShiLtJ_P0070476 Gtf3c2 protein_coding protein_coding MGP_NODShiLtJ_T0070477.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32387269 32412875 - MGP_NODShiLtJ_P0070477 Gtf3c2 protein_coding protein_coding MGP_NODShiLtJ_T0070478.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32388192 32390130 - Gtf3c2 protein_coding retained_intron MGP_NODShiLtJ_T0070479.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32390243 32396881 - Gtf3c2 protein_coding retained_intron MGP_NODShiLtJ_T0070480.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32397872 32412667 - Gtf3c2 protein_coding retained_intron MGP_NODShiLtJ_T0070481.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32403301 32412669 - Gtf3c2 protein_coding retained_intron MGP_NODShiLtJ_T0070482.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32403621 32405109 - MGP_NODShiLtJ_P0070482 Gtf3c2 protein_coding protein_coding MGP_NODShiLtJ_T0070483.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32403998 32412669 - MGP_NODShiLtJ_P0070483 Gtf3c2 protein_coding protein_coding MGP_NODShiLtJ_T0070484.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32404411 32412607 - MGP_NODShiLtJ_P0070484 Gtf3c2 protein_coding protein_coding MGP_NODShiLtJ_T0070485.1 MGP_NODShiLtJ_G0029216.1 mouse_genomes_project 5 32404528 32405429 - MGP_NODShiLtJ_P0070485 Gtf3c2 protein_coding protein_coding MGP_NODShiLtJ_T0008103.1 MGP_NODShiLtJ_G0006597.1 mouse_genomes_project 5 84352735 84364589 - Gm42800 lincRNA lincRNA MGP_NODShiLtJ_T0070152.1 MGP_NODShiLtJ_G0029153.1 mouse_genomes_project 5 25333798 25341334 + MGP_NODShiLtJ_P0070152 Chpf2 protein_coding protein_coding MGP_NODShiLtJ_T0070153.1 MGP_NODShiLtJ_G0029153.1 mouse_genomes_project 5 25333799 25336111 + Chpf2 protein_coding processed_transcript MGP_NODShiLtJ_T0070154.1 MGP_NODShiLtJ_G0029153.1 mouse_genomes_project 5 25333807 25339422 + MGP_NODShiLtJ_P0070154 Chpf2 protein_coding protein_coding MGP_NODShiLtJ_T0070155.1 MGP_NODShiLtJ_G0029153.1 mouse_genomes_project 5 25333829 25335305 + Chpf2 protein_coding processed_transcript MGP_NODShiLtJ_T0070156.1 MGP_NODShiLtJ_G0029153.1 mouse_genomes_project 5 25333882 25338158 + MGP_NODShiLtJ_P0070156 Chpf2 protein_coding protein_coding MGP_NODShiLtJ_T0070160.1 MGP_NODShiLtJ_G0029153.1 mouse_genomes_project 5 25340425 25341495 + Chpf2 protein_coding processed_transcript MGP_NODShiLtJ_T0008070.1 MGP_NODShiLtJ_G0006572.1 mouse_genomes_project 5 64025899 64029043 + lincRNA lincRNA MGP_NODShiLtJ_T0001439.1 MGP_NODShiLtJ_G0001358.1 mouse_genomes_project 5 24027018 24027803 + TEC TEC MGP_NODShiLtJ_T0001827.1 MGP_NODShiLtJ_G0001740.1 mouse_genomes_project 5 150614703 150615978 - TEC TEC MGP_NODShiLtJ_T0073525.1 MGP_NODShiLtJ_G0029805.1 mouse_genomes_project 5 137493237 137516109 + MGP_NODShiLtJ_P0073525 Slc8b1 protein_coding protein_coding MGP_NODShiLtJ_T0073526.1 MGP_NODShiLtJ_G0029805.1 mouse_genomes_project 5 137493304 137516104 + MGP_NODShiLtJ_P0073526 Slc8b1 protein_coding protein_coding MGP_NODShiLtJ_T0073527.1 MGP_NODShiLtJ_G0029805.1 mouse_genomes_project 5 137493321 137516105 + MGP_NODShiLtJ_P0073527 Slc8b1 protein_coding protein_coding MGP_NODShiLtJ_T0073528.1 MGP_NODShiLtJ_G0029805.1 mouse_genomes_project 5 137493339 137495255 + MGP_NODShiLtJ_P0073528 Slc8b1 protein_coding protein_coding MGP_NODShiLtJ_T0073529.1 MGP_NODShiLtJ_G0029805.1 mouse_genomes_project 5 137494934 137501871 + MGP_NODShiLtJ_P0073529 Slc8b1 protein_coding protein_coding MGP_NODShiLtJ_T0073530.1 MGP_NODShiLtJ_G0029805.1 mouse_genomes_project 5 137495209 137515142 + MGP_NODShiLtJ_P0073530 Slc8b1 protein_coding protein_coding MGP_NODShiLtJ_T0073531.1 MGP_NODShiLtJ_G0029805.1 mouse_genomes_project 5 137502898 137504340 + Slc8b1 protein_coding retained_intron MGP_NODShiLtJ_T0075404.1 MGP_NODShiLtJ_G0030149.1 mouse_genomes_project 5 163718392 163722514 + MGP_NODShiLtJ_P0075404 Bhlha15 protein_coding protein_coding MGP_NODShiLtJ_T0072827.1 MGP_NODShiLtJ_G0029664.1 mouse_genomes_project 5 124101883 124108367 - MGP_NODShiLtJ_P0072827 Slc26a1 protein_coding protein_coding MGP_NODShiLtJ_T0072828.1 MGP_NODShiLtJ_G0029664.1 mouse_genomes_project 5 124102537 124107551 - MGP_NODShiLtJ_P0072828 Slc26a1 protein_coding protein_coding MGP_NODShiLtJ_T0072829.1 MGP_NODShiLtJ_G0029664.1 mouse_genomes_project 5 124102554 124107551 - MGP_NODShiLtJ_P0072829 Slc26a1 protein_coding protein_coding MGP_NODShiLtJ_T0072830.1 MGP_NODShiLtJ_G0029664.1 mouse_genomes_project 5 124104087 124107583 - MGP_NODShiLtJ_P0072830 Slc26a1 protein_coding protein_coding MGP_NODShiLtJ_T0069916.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 19333816 21118428 + MGP_NODShiLtJ_P0069916 Magi2 protein_coding protein_coding MGP_NODShiLtJ_T0069917.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 19333826 20024420 + Magi2 protein_coding processed_transcript MGP_NODShiLtJ_T0069918.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 19333831 21118412 + MGP_NODShiLtJ_P0069918 Magi2 protein_coding protein_coding MGP_NODShiLtJ_T0069919.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 19333835 21120282 + MGP_NODShiLtJ_P0069919 Magi2 protein_coding protein_coding MGP_NODShiLtJ_T0069920.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 19334177 19336936 + Magi2 protein_coding retained_intron MGP_NODShiLtJ_T0069921.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 20186349 20546347 + MGP_NODShiLtJ_P0069921 Magi2 protein_coding protein_coding MGP_NODShiLtJ_T0069922.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 20358639 21120289 + MGP_NODShiLtJ_P0069922 Magi2 protein_coding protein_coding MGP_NODShiLtJ_T0069923.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 20553834 20852278 + Magi2 protein_coding processed_transcript MGP_NODShiLtJ_T0069924.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 20580913 21055945 + Magi2 protein_coding retained_intron MGP_NODShiLtJ_T0069925.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 20926381 20999382 + Magi2 protein_coding processed_transcript MGP_NODShiLtJ_T0069926.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 21001068 21117862 + MGP_NODShiLtJ_P0069926 Magi2 protein_coding protein_coding MGP_NODShiLtJ_T0069927.1 MGP_NODShiLtJ_G0029110.1 mouse_genomes_project 5 21117177 21118312 + Magi2 protein_coding processed_transcript MGP_NODShiLtJ_T0070703.1 MGP_NODShiLtJ_G0029248.1 mouse_genomes_project 5 34948439 34988335 + MGP_NODShiLtJ_P0070703 Maea protein_coding protein_coding MGP_NODShiLtJ_T0070704.1 MGP_NODShiLtJ_G0029248.1 mouse_genomes_project 5 34948491 34977738 + MGP_NODShiLtJ_P0070704 Maea protein_coding protein_coding MGP_NODShiLtJ_T0070705.1 MGP_NODShiLtJ_G0029248.1 mouse_genomes_project 5 34948495 34975407 + MGP_NODShiLtJ_P0070705 Maea protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070706.1 MGP_NODShiLtJ_G0029248.1 mouse_genomes_project 5 34949115 34975458 + MGP_NODShiLtJ_P0070706 Maea protein_coding protein_coding MGP_NODShiLtJ_T0070707.1 MGP_NODShiLtJ_G0029248.1 mouse_genomes_project 5 34977613 34986860 + Maea protein_coding retained_intron MGP_NODShiLtJ_T0070708.1 MGP_NODShiLtJ_G0029248.1 mouse_genomes_project 5 34986635 34987588 + Maea protein_coding retained_intron MGP_NODShiLtJ_T0004657.1 MGP_NODShiLtJ_G0004028.1 mouse_genomes_project 5 81011244 81065601 + Gm20647 antisense antisense MGP_NODShiLtJ_T0008151.1 MGP_NODShiLtJ_G0006637.1 mouse_genomes_project 5 113881095 113883744 + Gm43253 lincRNA lincRNA MGP_NODShiLtJ_T0010617.1 MGP_NODShiLtJ_G0008750.1 mouse_genomes_project 5 154215839 154215923 - Mir7034 miRNA miRNA MGP_NODShiLtJ_T0075498.1 MGP_NODShiLtJ_G0030166.1 mouse_genomes_project 5 164877877 164896167 + MGP_NODShiLtJ_P0075498 Zkscan5 protein_coding protein_coding MGP_NODShiLtJ_T0075499.1 MGP_NODShiLtJ_G0030166.1 mouse_genomes_project 5 164877983 164896167 + MGP_NODShiLtJ_P0075499 Zkscan5 protein_coding protein_coding MGP_NODShiLtJ_T0075500.1 MGP_NODShiLtJ_G0030166.1 mouse_genomes_project 5 164878438 164892981 + MGP_NODShiLtJ_P0075500 Zkscan5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075501.1 MGP_NODShiLtJ_G0030166.1 mouse_genomes_project 5 164880920 164892845 + MGP_NODShiLtJ_P0075501 Zkscan5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075502.1 MGP_NODShiLtJ_G0030166.1 mouse_genomes_project 5 164880950 164892899 + MGP_NODShiLtJ_P0075502 Zkscan5 protein_coding protein_coding MGP_NODShiLtJ_T0075503.1 MGP_NODShiLtJ_G0030166.1 mouse_genomes_project 5 164881810 164892715 + Zkscan5 protein_coding processed_transcript MGP_NODShiLtJ_T0071686.1 MGP_NODShiLtJ_G0029409.1 mouse_genomes_project 5 79378248 79599253 - MGP_NODShiLtJ_P0071686 Gabra2 protein_coding protein_coding MGP_NODShiLtJ_T0071687.1 MGP_NODShiLtJ_G0029409.1 mouse_genomes_project 5 79380721 79599213 - MGP_NODShiLtJ_P0071687 Gabra2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071688.1 MGP_NODShiLtJ_G0029409.1 mouse_genomes_project 5 79382584 79598018 - MGP_NODShiLtJ_P0071688 Gabra2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071689.1 MGP_NODShiLtJ_G0029409.1 mouse_genomes_project 5 79398109 79598578 - Gabra2 protein_coding processed_transcript MGP_NODShiLtJ_T0071690.1 MGP_NODShiLtJ_G0029409.1 mouse_genomes_project 5 79595046 79598243 - Gabra2 protein_coding retained_intron MGP_NODShiLtJ_T0001763.1 MGP_NODShiLtJ_G0001677.1 mouse_genomes_project 5 138999485 139002573 + TEC TEC MGP_NODShiLtJ_T0017976.1 MGP_NODShiLtJ_G0015458.1 mouse_genomes_project 5 32154398 32157745 + Abhd1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017977.1 MGP_NODShiLtJ_G0015458.1 mouse_genomes_project 5 32154398 32159433 + Abhd1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017978.1 MGP_NODShiLtJ_G0015458.1 mouse_genomes_project 5 32154421 32159431 + Abhd1 processed_transcript retained_intron MGP_NODShiLtJ_T0017979.1 MGP_NODShiLtJ_G0015458.1 mouse_genomes_project 5 32154421 32158055 + Abhd1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017980.1 MGP_NODShiLtJ_G0015458.1 mouse_genomes_project 5 32154424 32159041 + Abhd1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017981.1 MGP_NODShiLtJ_G0015458.1 mouse_genomes_project 5 32154438 32159431 + Abhd1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017982.1 MGP_NODShiLtJ_G0015458.1 mouse_genomes_project 5 32157715 32158526 + Abhd1 processed_transcript retained_intron MGP_NODShiLtJ_T0008026.1 MGP_NODShiLtJ_G0006539.1 mouse_genomes_project 5 38323532 38344905 - 2210406O10Rik lincRNA lincRNA MGP_NODShiLtJ_T0008027.1 MGP_NODShiLtJ_G0006539.1 mouse_genomes_project 5 38332137 38344896 - 2210406O10Rik lincRNA lincRNA MGP_NODShiLtJ_T0008028.1 MGP_NODShiLtJ_G0006539.1 mouse_genomes_project 5 38334307 38344895 - 2210406O10Rik lincRNA lincRNA MGP_NODShiLtJ_T0008029.1 MGP_NODShiLtJ_G0006539.1 mouse_genomes_project 5 38336924 38344937 - 2210406O10Rik lincRNA lincRNA MGP_NODShiLtJ_T0001614.1 MGP_NODShiLtJ_G0001529.1 mouse_genomes_project 5 73947945 73950155 - TEC TEC MGP_NODShiLtJ_T0074357.1 MGP_NODShiLtJ_G0029949.1 mouse_genomes_project 5 148432285 148440177 - A330070K13Rik protein_coding antisense MGP_NODShiLtJ_T0074358.1 MGP_NODShiLtJ_G0029949.1 mouse_genomes_project 5 148432358 148440178 - MGP_NODShiLtJ_P0074358 A330070K13Rik protein_coding protein_coding MGP_NODShiLtJ_T0014895.1 MGP_NODShiLtJ_G0013003.1 mouse_genomes_project 5 73686744 73690171 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099395.1 MGP_NODShiLtJ_G0037789.1 mouse_genomes_project 5 140834458 140834627 + Gm23458 snRNA snRNA MGP_NODShiLtJ_T0015029.1 MGP_NODShiLtJ_G0013137.1 mouse_genomes_project 5 138739211 138739544 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099350.1 MGP_NODShiLtJ_G0037744.1 mouse_genomes_project 5 42657806 42657986 - Gm23022 snRNA snRNA MGP_NODShiLtJ_T0001524.1 MGP_NODShiLtJ_G0001440.1 mouse_genomes_project 5 51910275 51912901 - TEC TEC MGP_NODShiLtJ_T0010583.1 MGP_NODShiLtJ_G0008716.1 mouse_genomes_project 5 77328551 77328657 + Gm24368 miRNA miRNA MGP_NODShiLtJ_T0014751.1 MGP_NODShiLtJ_G0012859.1 mouse_genomes_project 5 16660134 16660387 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014906.1 MGP_NODShiLtJ_G0013014.1 mouse_genomes_project 5 81109622 81110136 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014896.1 MGP_NODShiLtJ_G0013004.1 mouse_genomes_project 5 73869559 73869827 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075062.1 MGP_NODShiLtJ_G0030076.1 mouse_genomes_project 5 157907297 157909304 + Gm5294 protein_coding unprocessed_pseudogene MGP_NODShiLtJ_T0075063.1 MGP_NODShiLtJ_G0030076.1 mouse_genomes_project 5 157908007 157909547 + MGP_NODShiLtJ_P0075063 Gm5294 protein_coding protein_coding MGP_NODShiLtJ_T0072204.1 MGP_NODShiLtJ_G0029527.1 mouse_genomes_project 5 103777808 103779925 + Cxcl5 protein_coding retained_intron MGP_NODShiLtJ_T0072205.1 MGP_NODShiLtJ_G0029527.1 mouse_genomes_project 5 103777826 103779925 + MGP_NODShiLtJ_P0072205 Cxcl5 protein_coding protein_coding MGP_NODShiLtJ_T0014768.1 MGP_NODShiLtJ_G0012876.1 mouse_genomes_project 5 22388294 22388579 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074705.1 MGP_NODShiLtJ_G0030007.1 mouse_genomes_project 5 154760183 154791771 - MGP_NODShiLtJ_P0074705 Sh2b2 protein_coding protein_coding MGP_NODShiLtJ_T0074706.1 MGP_NODShiLtJ_G0030007.1 mouse_genomes_project 5 154760185 154791820 - MGP_NODShiLtJ_P0074706 Sh2b2 protein_coding protein_coding MGP_NODShiLtJ_T0074707.1 MGP_NODShiLtJ_G0030007.1 mouse_genomes_project 5 154762403 154764699 - Sh2b2 protein_coding retained_intron MGP_NODShiLtJ_T0074708.1 MGP_NODShiLtJ_G0030007.1 mouse_genomes_project 5 154765805 154791754 - MGP_NODShiLtJ_P0074708 Sh2b2 protein_coding protein_coding MGP_NODShiLtJ_T0074709.1 MGP_NODShiLtJ_G0030007.1 mouse_genomes_project 5 154778053 154795471 - MGP_NODShiLtJ_P0074709 Sh2b2 protein_coding protein_coding MGP_NODShiLtJ_T0099361.1 MGP_NODShiLtJ_G0037755.1 mouse_genomes_project 5 81712956 81713042 - Gm24776 snRNA snRNA MGP_NODShiLtJ_T0014789.1 MGP_NODShiLtJ_G0012897.1 mouse_genomes_project 5 26189165 26189442 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070743.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379104 35387268 + MGP_NODShiLtJ_P0070743 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070744.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379154 35394499 + MGP_NODShiLtJ_P0070744 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070745.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379154 35394499 + MGP_NODShiLtJ_P0070745 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070746.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379154 35394498 + MGP_NODShiLtJ_P0070746 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070747.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379221 35394494 + MGP_NODShiLtJ_P0070747 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070748.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379228 35393038 + MGP_NODShiLtJ_P0070748 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070749.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379736 35394499 + MGP_NODShiLtJ_P0070749 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070750.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379736 35394499 + MGP_NODShiLtJ_P0070750 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070751.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35379874 35387437 + MGP_NODShiLtJ_P0070751 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070752.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35380250 35390221 + Fgfr3 protein_coding retained_intron MGP_NODShiLtJ_T0070753.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35381202 35387281 + MGP_NODShiLtJ_P0070753 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070754.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35387168 35390174 + MGP_NODShiLtJ_P0070754 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070755.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35387394 35390714 + Fgfr3 protein_coding retained_intron MGP_NODShiLtJ_T0070756.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35387651 35391192 + MGP_NODShiLtJ_P0070756 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070757.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35390682 35392283 + MGP_NODShiLtJ_P0070757 Fgfr3 protein_coding protein_coding MGP_NODShiLtJ_T0070758.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35391122 35392344 + Fgfr3 protein_coding retained_intron MGP_NODShiLtJ_T0070759.1 MGP_NODShiLtJ_G0029256.1 mouse_genomes_project 5 35392035 35392995 + Fgfr3 protein_coding retained_intron MGP_NODShiLtJ_T0008193.1 MGP_NODShiLtJ_G0006667.1 mouse_genomes_project 5 123769809 123773506 + Gm43082 lincRNA lincRNA MGP_NODShiLtJ_T0010568.1 MGP_NODShiLtJ_G0008701.1 mouse_genomes_project 5 35594248 35594310 - Mir7024 miRNA miRNA MGP_NODShiLtJ_T0008364.1 MGP_NODShiLtJ_G0006775.1 mouse_genomes_project 5 166211383 166224394 - lincRNA lincRNA MGP_NODShiLtJ_T0072286.1 MGP_NODShiLtJ_G0029551.1 mouse_genomes_project 5 105530033 105533408 - Cxcl10 protein_coding retained_intron MGP_NODShiLtJ_T0072287.1 MGP_NODShiLtJ_G0029551.1 mouse_genomes_project 5 105530033 105533423 - MGP_NODShiLtJ_P0072287 Cxcl10 protein_coding protein_coding MGP_NODShiLtJ_T0072288.1 MGP_NODShiLtJ_G0029551.1 mouse_genomes_project 5 105530200 105533430 - MGP_NODShiLtJ_P0072288 Cxcl10 protein_coding protein_coding MGP_NODShiLtJ_T0072289.1 MGP_NODShiLtJ_G0029551.1 mouse_genomes_project 5 105532541 105533423 - Cxcl10 protein_coding retained_intron MGP_NODShiLtJ_T0010558.1 MGP_NODShiLtJ_G0008691.1 mouse_genomes_project 5 489253 489363 + Gm22926 miRNA miRNA MGP_NODShiLtJ_T0004755.1 MGP_NODShiLtJ_G0004094.1 mouse_genomes_project 5 137625425 137626732 - Gm43579 antisense antisense MGP_NODShiLtJ_T0075376.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410468 163436277 + Pms2 protein_coding retained_intron MGP_NODShiLtJ_T0075377.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410468 163436277 + Pms2 protein_coding processed_transcript MGP_NODShiLtJ_T0075378.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410468 163436277 + MGP_NODShiLtJ_P0075378 Pms2 protein_coding protein_coding MGP_NODShiLtJ_T0075379.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410494 163433519 + Pms2 protein_coding processed_transcript MGP_NODShiLtJ_T0075380.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410494 163433757 + Pms2 protein_coding processed_transcript MGP_NODShiLtJ_T0075381.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410503 163418938 + Pms2 protein_coding processed_transcript MGP_NODShiLtJ_T0075382.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410508 163416111 + Pms2 protein_coding processed_transcript MGP_NODShiLtJ_T0075383.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410529 163428141 + Pms2 protein_coding retained_intron MGP_NODShiLtJ_T0075384.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410529 163415648 + Pms2 protein_coding retained_intron MGP_NODShiLtJ_T0075385.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410561 163433473 + MGP_NODShiLtJ_P0075385 Pms2 protein_coding protein_coding MGP_NODShiLtJ_T0075386.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163410665 163414817 + Pms2 protein_coding processed_transcript MGP_NODShiLtJ_T0075387.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163414674 163415269 + Pms2 protein_coding retained_intron MGP_NODShiLtJ_T0075388.1 MGP_NODShiLtJ_G0030143.1 mouse_genomes_project 5 163420858 163426750 + MGP_NODShiLtJ_P0075388 Pms2 protein_coding protein_coding MGP_NODShiLtJ_T0070208.1 MGP_NODShiLtJ_G0029165.1 mouse_genomes_project 5 26558885 26575501 - MGP_NODShiLtJ_P0070208 Xrcc2 protein_coding protein_coding MGP_NODShiLtJ_T0070209.1 MGP_NODShiLtJ_G0029165.1 mouse_genomes_project 5 26561126 26562514 - Xrcc2 protein_coding processed_transcript MGP_NODShiLtJ_T0070210.1 MGP_NODShiLtJ_G0029165.1 mouse_genomes_project 5 26565542 26575449 - MGP_NODShiLtJ_P0070210 Xrcc2 protein_coding protein_coding MGP_NODShiLtJ_T0070211.1 MGP_NODShiLtJ_G0029165.1 mouse_genomes_project 5 26566300 26575440 - Xrcc2 protein_coding retained_intron MGP_NODShiLtJ_T0001587.1 MGP_NODShiLtJ_G0001502.1 mouse_genomes_project 5 71773814 71774768 + TEC TEC MGP_NODShiLtJ_T0004662.1 MGP_NODShiLtJ_G0004032.1 mouse_genomes_project 5 84105440 84106039 - Gm42802 antisense antisense MGP_NODShiLtJ_T0004651.1 MGP_NODShiLtJ_G0004023.1 mouse_genomes_project 5 75004276 75014561 + Gm26756 antisense antisense MGP_NODShiLtJ_T0070233.1 MGP_NODShiLtJ_G0029171.1 mouse_genomes_project 5 29209562 29215041 + MGP_NODShiLtJ_P0070233 En2 protein_coding protein_coding MGP_NODShiLtJ_T0070849.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36339753 36402805 + MGP_NODShiLtJ_P0070849 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070850.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36339854 36373986 + MGP_NODShiLtJ_P0070850 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070851.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36339858 36373986 + MGP_NODShiLtJ_P0070851 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070852.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36339893 36369590 + Add1 protein_coding processed_transcript MGP_NODShiLtJ_T0070853.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36339952 36402802 + MGP_NODShiLtJ_P0070853 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070854.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36339962 36402805 + MGP_NODShiLtJ_P0070854 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070855.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36340131 36402791 + MGP_NODShiLtJ_P0070855 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070856.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36364282 36367056 + Add1 protein_coding retained_intron MGP_NODShiLtJ_T0070857.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36369306 36401313 + MGP_NODShiLtJ_P0070857 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070858.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36384728 36395816 + MGP_NODShiLtJ_P0070858 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070859.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36387126 36390952 + Add1 protein_coding retained_intron MGP_NODShiLtJ_T0070860.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36387267 36401128 + MGP_NODShiLtJ_P0070860 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070861.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36389854 36402805 + MGP_NODShiLtJ_P0070861 Add1 protein_coding protein_coding MGP_NODShiLtJ_T0070862.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36390349 36401238 + Add1 protein_coding retained_intron MGP_NODShiLtJ_T0070863.1 MGP_NODShiLtJ_G0029271.1 mouse_genomes_project 5 36390471 36399240 + Add1 protein_coding retained_intron MGP_NODShiLtJ_T0098055.1 MGP_NODShiLtJ_G0036467.1 mouse_genomes_project 5 149732186 149732309 + Gm27266 rRNA rRNA MGP_NODShiLtJ_T0015026.1 MGP_NODShiLtJ_G0013134.1 mouse_genomes_project 5 134057010 134057445 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074513.1 MGP_NODShiLtJ_G0029970.1 mouse_genomes_project 5 153364906 153366165 + MGP_NODShiLtJ_P0074513 Cldn3 protein_coding protein_coding MGP_NODShiLtJ_T0001704.1 MGP_NODShiLtJ_G0001618.1 mouse_genomes_project 5 120643228 120645400 + TEC TEC MGP_NODShiLtJ_T0070069.1 MGP_NODShiLtJ_G0029137.1 mouse_genomes_project 5 24814140 24877958 + MGP_NODShiLtJ_P0070069 Klhl7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070070.1 MGP_NODShiLtJ_G0029137.1 mouse_genomes_project 5 24814182 24849966 + Klhl7 protein_coding retained_intron MGP_NODShiLtJ_T0070071.1 MGP_NODShiLtJ_G0029137.1 mouse_genomes_project 5 24814289 24880535 + MGP_NODShiLtJ_P0070071 Klhl7 protein_coding protein_coding MGP_NODShiLtJ_T0010597.1 MGP_NODShiLtJ_G0008730.1 mouse_genomes_project 5 122104293 122104392 - Gm27527 miRNA miRNA MGP_NODShiLtJ_T0075678.1 MGP_NODShiLtJ_G0030209.1 mouse_genomes_project 5 169664308 169689188 + MGP_NODShiLtJ_P0075678 Alox5ap protein_coding protein_coding MGP_NODShiLtJ_T0075679.1 MGP_NODShiLtJ_G0030209.1 mouse_genomes_project 5 169680057 169688794 + MGP_NODShiLtJ_P0075679 Alox5ap protein_coding protein_coding MGP_NODShiLtJ_T0075680.1 MGP_NODShiLtJ_G0030209.1 mouse_genomes_project 5 169688458 169689088 + Alox5ap protein_coding processed_transcript MGP_NODShiLtJ_T0099364.1 MGP_NODShiLtJ_G0037758.1 mouse_genomes_project 5 89602644 89602793 - Gm23429 snRNA snRNA MGP_NODShiLtJ_T0075587.1 MGP_NODShiLtJ_G0030195.1 mouse_genomes_project 5 167434254 167440720 - MGP_NODShiLtJ_P0075587 Cdx2 protein_coding protein_coding MGP_NODShiLtJ_T0001605.1 MGP_NODShiLtJ_G0001520.1 mouse_genomes_project 5 73320322 73321023 + TEC TEC MGP_NODShiLtJ_T0073686.1 MGP_NODShiLtJ_G0029838.1 mouse_genomes_project 5 139108742 139131116 - MGP_NODShiLtJ_P0073686 Sh2b3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073687.1 MGP_NODShiLtJ_G0029838.1 mouse_genomes_project 5 139108902 139131150 - MGP_NODShiLtJ_P0073687 Sh2b3 protein_coding protein_coding MGP_NODShiLtJ_T0073688.1 MGP_NODShiLtJ_G0029838.1 mouse_genomes_project 5 139109566 139121991 - MGP_NODShiLtJ_P0073688 Sh2b3 protein_coding protein_coding MGP_NODShiLtJ_T0073689.1 MGP_NODShiLtJ_G0029838.1 mouse_genomes_project 5 139110264 139130422 - MGP_NODShiLtJ_P0073689 Sh2b3 protein_coding protein_coding MGP_NODShiLtJ_T0073690.1 MGP_NODShiLtJ_G0029838.1 mouse_genomes_project 5 139110470 139131141 - MGP_NODShiLtJ_P0073690 Sh2b3 protein_coding protein_coding MGP_NODShiLtJ_T0073691.1 MGP_NODShiLtJ_G0029838.1 mouse_genomes_project 5 139110544 139131108 - MGP_NODShiLtJ_P0073691 Sh2b3 protein_coding protein_coding MGP_NODShiLtJ_T0073692.1 MGP_NODShiLtJ_G0029838.1 mouse_genomes_project 5 139112361 139131937 - MGP_NODShiLtJ_P0073692 Sh2b3 protein_coding protein_coding MGP_NODShiLtJ_T0073693.1 MGP_NODShiLtJ_G0029838.1 mouse_genomes_project 5 139121817 139130582 - MGP_NODShiLtJ_P0073693 Sh2b3 protein_coding protein_coding MGP_NODShiLtJ_T0008312.1 MGP_NODShiLtJ_G0006739.1 mouse_genomes_project 5 144621365 144659676 + Gm42954 lincRNA lincRNA MGP_NODShiLtJ_T0073655.1 MGP_NODShiLtJ_G0029835.1 mouse_genomes_project 5 138848781 138925487 - MGP_NODShiLtJ_P0073655 Acad10 protein_coding protein_coding MGP_NODShiLtJ_T0073656.1 MGP_NODShiLtJ_G0029835.1 mouse_genomes_project 5 138850970 138918985 - MGP_NODShiLtJ_P0073656 Acad10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073657.1 MGP_NODShiLtJ_G0029835.1 mouse_genomes_project 5 138855902 138925506 - Acad10 protein_coding retained_intron MGP_NODShiLtJ_T0073658.1 MGP_NODShiLtJ_G0029835.1 mouse_genomes_project 5 138858187 138923835 - MGP_NODShiLtJ_P0073658 Acad10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073659.1 MGP_NODShiLtJ_G0029835.1 mouse_genomes_project 5 138903780 138912409 - Acad10 protein_coding processed_transcript MGP_NODShiLtJ_T0004614.1 MGP_NODShiLtJ_G0003995.1 mouse_genomes_project 5 38767071 38770356 - Ppp2r2cos antisense antisense MGP_NODShiLtJ_T0101970.1 MGP_NODShiLtJ_G0040138.1 mouse_genomes_project 5 168752217 168753019 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014839.1 MGP_NODShiLtJ_G0012947.1 mouse_genomes_project 5 41497461 41498360 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017971.1 MGP_NODShiLtJ_G0015456.1 mouse_genomes_project 5 25888235 25890270 + 2900005J15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017972.1 MGP_NODShiLtJ_G0015456.1 mouse_genomes_project 5 25888710 25897342 + 2900005J15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0008131.1 MGP_NODShiLtJ_G0006620.1 mouse_genomes_project 5 104855724 104861892 - Gm28271 lincRNA lincRNA MGP_NODShiLtJ_T0008078.1 MGP_NODShiLtJ_G0006579.1 mouse_genomes_project 5 71759377 71773701 - 1700027F09Rik lincRNA lincRNA MGP_NODShiLtJ_T0070653.1 MGP_NODShiLtJ_G0029240.1 mouse_genomes_project 5 34163809 34172175 - MGP_NODShiLtJ_P0070653 protein_coding protein_coding MGP_NODShiLtJ_T0074210.1 MGP_NODShiLtJ_G0029918.1 mouse_genomes_project 5 145437094 145511551 + Glt1d1 protein_coding retained_intron MGP_NODShiLtJ_T0074211.1 MGP_NODShiLtJ_G0029918.1 mouse_genomes_project 5 145437094 145530055 + MGP_NODShiLtJ_P0074211 Glt1d1 protein_coding protein_coding MGP_NODShiLtJ_T0074212.1 MGP_NODShiLtJ_G0029918.1 mouse_genomes_project 5 145472540 145509522 + Glt1d1 protein_coding retained_intron MGP_NODShiLtJ_T0073321.1 MGP_NODShiLtJ_G0029769.1 mouse_genomes_project 5 131890375 131914941 + Msi1 protein_coding retained_intron MGP_NODShiLtJ_T0073322.1 MGP_NODShiLtJ_G0029769.1 mouse_genomes_project 5 131890424 131921216 + MGP_NODShiLtJ_P0073322 Msi1 protein_coding protein_coding MGP_NODShiLtJ_T0073323.1 MGP_NODShiLtJ_G0029769.1 mouse_genomes_project 5 131893486 131916864 + MGP_NODShiLtJ_P0073323 Msi1 protein_coding protein_coding MGP_NODShiLtJ_T0073324.1 MGP_NODShiLtJ_G0029769.1 mouse_genomes_project 5 131896340 131901221 + Msi1 protein_coding retained_intron MGP_NODShiLtJ_T0073325.1 MGP_NODShiLtJ_G0029769.1 mouse_genomes_project 5 131899320 131916857 + Msi1 protein_coding retained_intron MGP_NODShiLtJ_T0073326.1 MGP_NODShiLtJ_G0029769.1 mouse_genomes_project 5 131899869 131911403 + Msi1 protein_coding retained_intron MGP_NODShiLtJ_T0073327.1 MGP_NODShiLtJ_G0029769.1 mouse_genomes_project 5 131900565 131916841 + MGP_NODShiLtJ_P0073327 Msi1 protein_coding protein_coding MGP_NODShiLtJ_T0073328.1 MGP_NODShiLtJ_G0029769.1 mouse_genomes_project 5 131901067 131911625 + Msi1 protein_coding retained_intron MGP_NODShiLtJ_T0001726.1 MGP_NODShiLtJ_G0001640.1 mouse_genomes_project 5 129347739 129348120 + TEC TEC MGP_NODShiLtJ_T0100623.1 MGP_NODShiLtJ_G0039017.1 mouse_genomes_project 5 94857405 94857537 - Gm25765 snoRNA snoRNA MGP_NODShiLtJ_T0001851.1 MGP_NODShiLtJ_G0001763.1 mouse_genomes_project 5 159550852 159554586 - TEC TEC MGP_NODShiLtJ_T0074635.1 MGP_NODShiLtJ_G0029994.1 mouse_genomes_project 5 154393526 154396140 + MGP_NODShiLtJ_P0074635 Hspb1 protein_coding protein_coding MGP_NODShiLtJ_T0074636.1 MGP_NODShiLtJ_G0029994.1 mouse_genomes_project 5 154393625 154396138 + MGP_NODShiLtJ_P0074636 Hspb1 protein_coding protein_coding MGP_NODShiLtJ_T0011503.1 MGP_NODShiLtJ_G0009636.1 mouse_genomes_project 5 151016194 151016473 + Gm25722 misc_RNA misc_RNA MGP_NODShiLtJ_T0004795.1 MGP_NODShiLtJ_G0004124.1 mouse_genomes_project 5 153023031 153026687 + Gm10369 antisense antisense MGP_NODShiLtJ_T0015103.1 MGP_NODShiLtJ_G0013211.1 mouse_genomes_project 5 171038861 171041301 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008053.1 MGP_NODShiLtJ_G0006556.1 mouse_genomes_project 5 47120307 47136510 - Gm42985 lincRNA lincRNA MGP_NODShiLtJ_T0008346.1 MGP_NODShiLtJ_G0006760.1 mouse_genomes_project 5 155948973 155966158 - Gm42456 lincRNA lincRNA MGP_NODShiLtJ_T0014866.1 MGP_NODShiLtJ_G0012974.1 mouse_genomes_project 5 62336917 62338267 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010623.1 MGP_NODShiLtJ_G0008756.1 mouse_genomes_project 5 155975506 155975571 - Mir7036 miRNA miRNA MGP_NODShiLtJ_T0018000.1 MGP_NODShiLtJ_G0015466.1 mouse_genomes_project 5 72013394 72139708 - Gm20033 processed_transcript antisense MGP_NODShiLtJ_T0018001.1 MGP_NODShiLtJ_G0015466.1 mouse_genomes_project 5 72013398 72014163 - Gm20033 processed_transcript retained_intron MGP_NODShiLtJ_T0018002.1 MGP_NODShiLtJ_G0015466.1 mouse_genomes_project 5 72013510 72018354 - Gm20033 processed_transcript retained_intron MGP_NODShiLtJ_T0018003.1 MGP_NODShiLtJ_G0015466.1 mouse_genomes_project 5 72015010 72040425 - Gm20033 processed_transcript processed_transcript MGP_NODShiLtJ_T0018004.1 MGP_NODShiLtJ_G0015466.1 mouse_genomes_project 5 72137376 72139707 - Gm20033 processed_transcript antisense MGP_NODShiLtJ_T0014779.1 MGP_NODShiLtJ_G0012887.1 mouse_genomes_project 5 23504575 23505183 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004607.1 MGP_NODShiLtJ_G0003988.1 mouse_genomes_project 5 35972214 35977120 + Gm42848 antisense antisense MGP_NODShiLtJ_T0101149.1 MGP_NODShiLtJ_G0039480.1 mouse_genomes_project 5 63205822 63206396 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0004584.1 MGP_NODShiLtJ_G0003969.1 mouse_genomes_project 5 22860458 22862135 + Gm16110 antisense antisense MGP_NODShiLtJ_T0017973.1 MGP_NODShiLtJ_G0015457.1 mouse_genomes_project 5 31756663 31771093 - Gm9899 processed_transcript lincRNA MGP_NODShiLtJ_T0017974.1 MGP_NODShiLtJ_G0015457.1 mouse_genomes_project 5 31760143 31760702 - Gm9899 processed_transcript pseudogene MGP_NODShiLtJ_T0017975.1 MGP_NODShiLtJ_G0015457.1 mouse_genomes_project 5 31760625 31762532 - Gm9899 processed_transcript retained_intron MGP_NODShiLtJ_T0001849.1 MGP_NODShiLtJ_G0001761.1 mouse_genomes_project 5 159238354 159240900 - TEC TEC MGP_NODShiLtJ_T0015007.1 MGP_NODShiLtJ_G0013115.1 mouse_genomes_project 5 126467471 126468918 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072526.1 MGP_NODShiLtJ_G0029598.1 mouse_genomes_project 5 116438529 116689409 - MGP_NODShiLtJ_P0072526 Wdfy3 protein_coding protein_coding MGP_NODShiLtJ_T0072527.1 MGP_NODShiLtJ_G0029598.1 mouse_genomes_project 5 116441882 116458440 - Wdfy3 protein_coding retained_intron MGP_NODShiLtJ_T0072528.1 MGP_NODShiLtJ_G0029598.1 mouse_genomes_project 5 116443103 116591384 - MGP_NODShiLtJ_P0072528 Wdfy3 protein_coding protein_coding MGP_NODShiLtJ_T0072529.1 MGP_NODShiLtJ_G0029598.1 mouse_genomes_project 5 116443103 116591384 - MGP_NODShiLtJ_P0072529 Wdfy3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072530.1 MGP_NODShiLtJ_G0029598.1 mouse_genomes_project 5 116531150 116539199 - MGP_NODShiLtJ_P0072530 Wdfy3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072531.1 MGP_NODShiLtJ_G0029598.1 mouse_genomes_project 5 116537639 116689409 - MGP_NODShiLtJ_P0072531 Wdfy3 protein_coding protein_coding MGP_NODShiLtJ_T0072532.1 MGP_NODShiLtJ_G0029598.1 mouse_genomes_project 5 116544446 116547042 - Wdfy3 protein_coding processed_transcript MGP_NODShiLtJ_T0004818.1 MGP_NODShiLtJ_G0004140.1 mouse_genomes_project 5 159312319 159318712 + Gm16121 antisense antisense MGP_NODShiLtJ_T0001569.1 MGP_NODShiLtJ_G0001485.1 mouse_genomes_project 5 63010012 63012620 + TEC TEC MGP_NODShiLtJ_T0014884.1 MGP_NODShiLtJ_G0012992.1 mouse_genomes_project 5 68836131 68836748 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069710.1 MGP_NODShiLtJ_G0029075.1 mouse_genomes_project 5 2666511 2697002 - Cldn12 protein_coding processed_transcript MGP_NODShiLtJ_T0069711.1 MGP_NODShiLtJ_G0029075.1 mouse_genomes_project 5 2685902 2696879 - MGP_NODShiLtJ_P0069711 Cldn12 protein_coding protein_coding MGP_NODShiLtJ_T0069712.1 MGP_NODShiLtJ_G0029075.1 mouse_genomes_project 5 2685997 2696963 - MGP_NODShiLtJ_P0069712 Cldn12 protein_coding protein_coding MGP_NODShiLtJ_T0069713.1 MGP_NODShiLtJ_G0029075.1 mouse_genomes_project 5 2685999 2696915 - MGP_NODShiLtJ_P0069713 Cldn12 protein_coding protein_coding MGP_NODShiLtJ_T0069714.1 MGP_NODShiLtJ_G0029075.1 mouse_genomes_project 5 2686111 2696820 - MGP_NODShiLtJ_P0069714 Cldn12 protein_coding protein_coding MGP_NODShiLtJ_T0069715.1 MGP_NODShiLtJ_G0029075.1 mouse_genomes_project 5 2689297 2696879 - MGP_NODShiLtJ_P0069715 Cldn12 protein_coding protein_coding MGP_NODShiLtJ_T0069716.1 MGP_NODShiLtJ_G0029075.1 mouse_genomes_project 5 2693182 2697048 - Cldn12 protein_coding processed_transcript MGP_NODShiLtJ_T0069717.1 MGP_NODShiLtJ_G0029075.1 mouse_genomes_project 5 2695309 2696539 - Cldn12 protein_coding processed_transcript MGP_NODShiLtJ_T0100606.1 MGP_NODShiLtJ_G0039000.1 mouse_genomes_project 5 41627993 41628122 - Gm25377 snoRNA snoRNA MGP_NODShiLtJ_T0018063.1 MGP_NODShiLtJ_G0015486.1 mouse_genomes_project 5 170373402 170381070 + Gm43451 processed_transcript lincRNA MGP_NODShiLtJ_T0018064.1 MGP_NODShiLtJ_G0015486.1 mouse_genomes_project 5 170380445 170381315 + Gm43451 processed_transcript retained_intron MGP_NODShiLtJ_T0007973.1 MGP_NODShiLtJ_G0006505.1 mouse_genomes_project 5 6667227 6668495 - Gm15611 lincRNA lincRNA MGP_NODShiLtJ_T0070174.1 MGP_NODShiLtJ_G0029157.1 mouse_genomes_project 5 25511307 25511629 - Crygn protein_coding processed_transcript MGP_NODShiLtJ_T0070175.1 MGP_NODShiLtJ_G0029157.1 mouse_genomes_project 5 25511307 25518312 - MGP_NODShiLtJ_P0070175 Crygn protein_coding protein_coding MGP_NODShiLtJ_T0071392.1 MGP_NODShiLtJ_G0029360.1 mouse_genomes_project 5 58002824 58138728 + MGP_NODShiLtJ_P0071392 Stim2 protein_coding protein_coding MGP_NODShiLtJ_T0071393.1 MGP_NODShiLtJ_G0029360.1 mouse_genomes_project 5 58003253 58138737 + MGP_NODShiLtJ_P0071393 Stim2 protein_coding protein_coding MGP_NODShiLtJ_T0071394.1 MGP_NODShiLtJ_G0029360.1 mouse_genomes_project 5 58088550 58121349 + Stim2 protein_coding processed_transcript MGP_NODShiLtJ_T0071395.1 MGP_NODShiLtJ_G0029360.1 mouse_genomes_project 5 58133527 58136258 + Stim2 protein_coding retained_intron MGP_NODShiLtJ_T0071572.1 MGP_NODShiLtJ_G0029391.1 mouse_genomes_project 5 73760062 73804370 + MGP_NODShiLtJ_P0071572 Nsun7 protein_coding protein_coding MGP_NODShiLtJ_T0071573.1 MGP_NODShiLtJ_G0029391.1 mouse_genomes_project 5 73760077 73805334 + MGP_NODShiLtJ_P0071573 Nsun7 protein_coding protein_coding MGP_NODShiLtJ_T0071574.1 MGP_NODShiLtJ_G0029391.1 mouse_genomes_project 5 73760183 73766922 + Nsun7 protein_coding retained_intron MGP_NODShiLtJ_T0071575.1 MGP_NODShiLtJ_G0029391.1 mouse_genomes_project 5 73760477 73805323 + MGP_NODShiLtJ_P0071575 Nsun7 protein_coding protein_coding MGP_NODShiLtJ_T0014854.1 MGP_NODShiLtJ_G0012962.1 mouse_genomes_project 5 53451285 53453584 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010629.1 MGP_NODShiLtJ_G0008762.1 mouse_genomes_project 5 158507485 158507581 - Mir339 miRNA miRNA MGP_NODShiLtJ_T0008344.1 MGP_NODShiLtJ_G0006758.1 mouse_genomes_project 5 155826385 155853399 - lincRNA lincRNA MGP_NODShiLtJ_T0073479.1 MGP_NODShiLtJ_G0029794.1 mouse_genomes_project 5 134942809 134967794 + Hrk protein_coding processed_transcript MGP_NODShiLtJ_T0073480.1 MGP_NODShiLtJ_G0029794.1 mouse_genomes_project 5 134950155 134972440 + MGP_NODShiLtJ_P0073480 Hrk protein_coding protein_coding MGP_NODShiLtJ_T0069897.1 MGP_NODShiLtJ_G0029105.1 mouse_genomes_project 5 16084218 16106733 + Hgf protein_coding retained_intron MGP_NODShiLtJ_T0069898.1 MGP_NODShiLtJ_G0029105.1 mouse_genomes_project 5 16084302 16102322 + Hgf protein_coding retained_intron MGP_NODShiLtJ_T0069899.1 MGP_NODShiLtJ_G0029105.1 mouse_genomes_project 5 16084302 16162642 + MGP_NODShiLtJ_P0069899 Hgf protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069900.1 MGP_NODShiLtJ_G0029105.1 mouse_genomes_project 5 16084484 16102895 + Hgf protein_coding retained_intron MGP_NODShiLtJ_T0069901.1 MGP_NODShiLtJ_G0029105.1 mouse_genomes_project 5 16084519 16160758 + MGP_NODShiLtJ_P0069901 Hgf protein_coding protein_coding MGP_NODShiLtJ_T0069902.1 MGP_NODShiLtJ_G0029105.1 mouse_genomes_project 5 16084661 16160595 + MGP_NODShiLtJ_P0069902 Hgf protein_coding protein_coding MGP_NODShiLtJ_T0070076.1 MGP_NODShiLtJ_G0029139.1 mouse_genomes_project 5 25046152 25078545 - MGP_NODShiLtJ_P0070076 Kcnh2 protein_coding protein_coding MGP_NODShiLtJ_T0070077.1 MGP_NODShiLtJ_G0029139.1 mouse_genomes_project 5 25046152 25056136 - MGP_NODShiLtJ_P0070077 Kcnh2 protein_coding protein_coding MGP_NODShiLtJ_T0070078.1 MGP_NODShiLtJ_G0029139.1 mouse_genomes_project 5 25046646 25048818 - Kcnh2 protein_coding processed_transcript MGP_NODShiLtJ_T0070079.1 MGP_NODShiLtJ_G0029139.1 mouse_genomes_project 5 25051053 25052353 - Kcnh2 protein_coding processed_transcript MGP_NODShiLtJ_T0070080.1 MGP_NODShiLtJ_G0029139.1 mouse_genomes_project 5 25052011 25053083 - Kcnh2 protein_coding processed_transcript MGP_NODShiLtJ_T0004611.1 MGP_NODShiLtJ_G0003992.1 mouse_genomes_project 5 37423970 37431551 - 4931431C16Rik antisense antisense MGP_NODShiLtJ_T0018014.1 MGP_NODShiLtJ_G0015470.1 mouse_genomes_project 5 82978435 82979696 + Dancr processed_transcript lincRNA MGP_NODShiLtJ_T0018015.1 MGP_NODShiLtJ_G0015470.1 mouse_genomes_project 5 82978441 82979695 + Dancr processed_transcript retained_intron MGP_NODShiLtJ_T0001840.1 MGP_NODShiLtJ_G0001752.1 mouse_genomes_project 5 153389974 153392990 - TEC TEC MGP_NODShiLtJ_T0073583.1 MGP_NODShiLtJ_G0029822.1 mouse_genomes_project 5 138293415 138365080 - MGP_NODShiLtJ_P0073583 Ptpn11 protein_coding protein_coding MGP_NODShiLtJ_T0073584.1 MGP_NODShiLtJ_G0029822.1 mouse_genomes_project 5 138293417 138365050 - Ptpn11 protein_coding retained_intron MGP_NODShiLtJ_T0073585.1 MGP_NODShiLtJ_G0029822.1 mouse_genomes_project 5 138293423 138365012 - MGP_NODShiLtJ_P0073585 Ptpn11 protein_coding protein_coding MGP_NODShiLtJ_T0073586.1 MGP_NODShiLtJ_G0029822.1 mouse_genomes_project 5 138296722 138307699 - Ptpn11 protein_coding processed_transcript MGP_NODShiLtJ_T0072219.1 MGP_NODShiLtJ_G0029534.1 mouse_genomes_project 5 103938390 103945809 + Mthfd2l protein_coding processed_transcript MGP_NODShiLtJ_T0072220.1 MGP_NODShiLtJ_G0029534.1 mouse_genomes_project 5 103938529 103940695 + MGP_NODShiLtJ_P0072220 Mthfd2l protein_coding protein_coding MGP_NODShiLtJ_T0072221.1 MGP_NODShiLtJ_G0029534.1 mouse_genomes_project 5 103938553 104036015 + MGP_NODShiLtJ_P0072221 Mthfd2l protein_coding protein_coding MGP_NODShiLtJ_T0072222.1 MGP_NODShiLtJ_G0029534.1 mouse_genomes_project 5 103955133 103989065 + Mthfd2l protein_coding retained_intron MGP_NODShiLtJ_T0011502.1 MGP_NODShiLtJ_G0009635.1 mouse_genomes_project 5 141824784 141825047 + Gm23171 misc_RNA misc_RNA MGP_NODShiLtJ_T0001657.1 MGP_NODShiLtJ_G0001571.1 mouse_genomes_project 5 83340544 83342150 - TEC TEC MGP_NODShiLtJ_T0001503.1 MGP_NODShiLtJ_G0001419.1 mouse_genomes_project 5 47238153 47239690 - TEC TEC MGP_NODShiLtJ_T0008240.1 MGP_NODShiLtJ_G0006693.1 mouse_genomes_project 5 131744396 131763855 + Gm13830 lincRNA lincRNA MGP_NODShiLtJ_T0008241.1 MGP_NODShiLtJ_G0006693.1 mouse_genomes_project 5 131744412 131745571 + Gm13830 lincRNA lincRNA MGP_NODShiLtJ_T0008242.1 MGP_NODShiLtJ_G0006693.1 mouse_genomes_project 5 131744413 131762241 + Gm13830 lincRNA lincRNA MGP_NODShiLtJ_T0008243.1 MGP_NODShiLtJ_G0006693.1 mouse_genomes_project 5 131744423 131745604 + Gm13830 lincRNA lincRNA MGP_NODShiLtJ_T0008244.1 MGP_NODShiLtJ_G0006693.1 mouse_genomes_project 5 131744483 131745013 + Gm13830 lincRNA lincRNA MGP_NODShiLtJ_T0008337.1 MGP_NODShiLtJ_G0006754.1 mouse_genomes_project 5 152396706 152397503 - Gm15627 lincRNA lincRNA MGP_NODShiLtJ_T0004666.1 MGP_NODShiLtJ_G0004035.1 mouse_genomes_project 5 86189821 86197555 + Hopxos antisense antisense MGP_NODShiLtJ_T0001852.1 MGP_NODShiLtJ_G0001764.1 mouse_genomes_project 5 160645516 160646477 - TEC TEC MGP_NODShiLtJ_T0004765.1 MGP_NODShiLtJ_G0004104.1 mouse_genomes_project 5 140399668 140411705 - Gm2479 antisense antisense MGP_NODShiLtJ_T0004766.1 MGP_NODShiLtJ_G0004104.1 mouse_genomes_project 5 140399833 140406840 - Gm2479 antisense antisense MGP_NODShiLtJ_T0074500.1 MGP_NODShiLtJ_G0029966.1 mouse_genomes_project 5 153273163 153280779 - MGP_NODShiLtJ_P0074500 Wbscr28 protein_coding protein_coding MGP_NODShiLtJ_T0074501.1 MGP_NODShiLtJ_G0029966.1 mouse_genomes_project 5 153273164 153280779 - MGP_NODShiLtJ_P0074501 Wbscr28 protein_coding protein_coding MGP_NODShiLtJ_T0071200.1 MGP_NODShiLtJ_G0029330.1 mouse_genomes_project 5 46666575 46669497 - MGP_NODShiLtJ_P0071200 Fgfbp1 protein_coding protein_coding MGP_NODShiLtJ_T0071201.1 MGP_NODShiLtJ_G0029330.1 mouse_genomes_project 5 46666577 46669482 - MGP_NODShiLtJ_P0071201 Fgfbp1 protein_coding protein_coding MGP_NODShiLtJ_T0071202.1 MGP_NODShiLtJ_G0029330.1 mouse_genomes_project 5 46666580 46668771 - MGP_NODShiLtJ_P0071202 Fgfbp1 protein_coding protein_coding MGP_NODShiLtJ_T0072742.1 MGP_NODShiLtJ_G0029648.1 mouse_genomes_project 5 123212168 123221714 + protein_coding retained_intron MGP_NODShiLtJ_T0072743.1 MGP_NODShiLtJ_G0029648.1 mouse_genomes_project 5 123220286 123221719 + protein_coding retained_intron MGP_NODShiLtJ_T0070944.1 MGP_NODShiLtJ_G0029284.1 mouse_genomes_project 5 37399334 37417036 - MGP_NODShiLtJ_P0070944 Trmt44 protein_coding protein_coding MGP_NODShiLtJ_T0070945.1 MGP_NODShiLtJ_G0029284.1 mouse_genomes_project 5 37414455 37417017 - Trmt44 protein_coding retained_intron MGP_NODShiLtJ_T0070946.1 MGP_NODShiLtJ_G0029284.1 mouse_genomes_project 5 37414707 37416702 - MGP_NODShiLtJ_P0070946 Trmt44 protein_coding protein_coding MGP_NODShiLtJ_T0070885.1 MGP_NODShiLtJ_G0029273.1 mouse_genomes_project 5 36409032 36434141 - MGP_NODShiLtJ_P0070885 Nop14 protein_coding protein_coding MGP_NODShiLtJ_T0070886.1 MGP_NODShiLtJ_G0029273.1 mouse_genomes_project 5 36411823 36418354 - MGP_NODShiLtJ_P0070886 Nop14 protein_coding protein_coding MGP_NODShiLtJ_T0070887.1 MGP_NODShiLtJ_G0029273.1 mouse_genomes_project 5 36415160 36419618 - Nop14 protein_coding retained_intron MGP_NODShiLtJ_T0099393.1 MGP_NODShiLtJ_G0037787.1 mouse_genomes_project 5 138555509 138555667 + Gm24671 snRNA snRNA MGP_NODShiLtJ_T0001675.1 MGP_NODShiLtJ_G0001589.1 mouse_genomes_project 5 105349211 105349769 - TEC TEC MGP_NODShiLtJ_T0075278.1 MGP_NODShiLtJ_G0030122.1 mouse_genomes_project 5 162378435 162383291 - MGP_NODShiLtJ_P0075278 Actb protein_coding protein_coding MGP_NODShiLtJ_T0075279.1 MGP_NODShiLtJ_G0030122.1 mouse_genomes_project 5 162378799 162383239 - MGP_NODShiLtJ_P0075279 Actb protein_coding protein_coding MGP_NODShiLtJ_T0075280.1 MGP_NODShiLtJ_G0030122.1 mouse_genomes_project 5 162380852 162382323 - MGP_NODShiLtJ_P0075280 Actb protein_coding protein_coding MGP_NODShiLtJ_T0075281.1 MGP_NODShiLtJ_G0030122.1 mouse_genomes_project 5 162380896 162383262 - Actb protein_coding processed_transcript MGP_NODShiLtJ_T0075282.1 MGP_NODShiLtJ_G0030122.1 mouse_genomes_project 5 162381173 162383259 - MGP_NODShiLtJ_P0075282 Actb protein_coding protein_coding MGP_NODShiLtJ_T0075283.1 MGP_NODShiLtJ_G0030122.1 mouse_genomes_project 5 162381206 162382439 - MGP_NODShiLtJ_P0075283 Actb protein_coding protein_coding MGP_NODShiLtJ_T0075284.1 MGP_NODShiLtJ_G0030122.1 mouse_genomes_project 5 162381267 162383209 - Actb protein_coding retained_intron MGP_NODShiLtJ_T0075285.1 MGP_NODShiLtJ_G0030122.1 mouse_genomes_project 5 162381374 162383231 - Actb protein_coding retained_intron MGP_NODShiLtJ_T0070297.1 MGP_NODShiLtJ_G0029184.1 mouse_genomes_project 5 31305291 31307803 - MGP_NODShiLtJ_P0070297 3110082J24Rik protein_coding protein_coding MGP_NODShiLtJ_T0070298.1 MGP_NODShiLtJ_G0029184.1 mouse_genomes_project 5 31305596 31307076 - MGP_NODShiLtJ_P0070298 3110082J24Rik protein_coding protein_coding MGP_NODShiLtJ_T0074902.1 MGP_NODShiLtJ_G0030042.1 mouse_genomes_project 5 156378995 156415371 - MGP_NODShiLtJ_P0074902 Agfg2 protein_coding protein_coding MGP_NODShiLtJ_T0074903.1 MGP_NODShiLtJ_G0030042.1 mouse_genomes_project 5 156379020 156415325 - MGP_NODShiLtJ_P0074903 Agfg2 protein_coding protein_coding MGP_NODShiLtJ_T0074904.1 MGP_NODShiLtJ_G0030042.1 mouse_genomes_project 5 156379304 156390484 - Agfg2 protein_coding retained_intron MGP_NODShiLtJ_T0074905.1 MGP_NODShiLtJ_G0030042.1 mouse_genomes_project 5 156382320 156415371 - MGP_NODShiLtJ_P0074905 Agfg2 protein_coding protein_coding MGP_NODShiLtJ_T0074906.1 MGP_NODShiLtJ_G0030042.1 mouse_genomes_project 5 156384091 156393449 - MGP_NODShiLtJ_P0074906 Agfg2 protein_coding protein_coding MGP_NODShiLtJ_T0074907.1 MGP_NODShiLtJ_G0030042.1 mouse_genomes_project 5 156391942 156415338 - Agfg2 protein_coding retained_intron MGP_NODShiLtJ_T0001575.1 MGP_NODShiLtJ_G0001491.1 mouse_genomes_project 5 63260298 63261765 + TEC TEC MGP_NODShiLtJ_T0010622.1 MGP_NODShiLtJ_G0008755.1 mouse_genomes_project 5 155972662 155972759 + Mir8116 miRNA miRNA MGP_NODShiLtJ_T0075474.1 MGP_NODShiLtJ_G0030161.1 mouse_genomes_project 5 164806364 164818712 + MGP_NODShiLtJ_P0075474 Bud31 protein_coding protein_coding MGP_NODShiLtJ_T0075475.1 MGP_NODShiLtJ_G0030161.1 mouse_genomes_project 5 164806398 164807664 + Bud31 protein_coding retained_intron MGP_NODShiLtJ_T0075476.1 MGP_NODShiLtJ_G0030161.1 mouse_genomes_project 5 164806399 164818708 + MGP_NODShiLtJ_P0075476 Bud31 protein_coding protein_coding MGP_NODShiLtJ_T0075477.1 MGP_NODShiLtJ_G0030161.1 mouse_genomes_project 5 164806410 164818708 + MGP_NODShiLtJ_P0075477 Bud31 protein_coding protein_coding MGP_NODShiLtJ_T0075478.1 MGP_NODShiLtJ_G0030161.1 mouse_genomes_project 5 164806417 164818705 + MGP_NODShiLtJ_P0075478 Bud31 protein_coding protein_coding MGP_NODShiLtJ_T0075479.1 MGP_NODShiLtJ_G0030161.1 mouse_genomes_project 5 164808149 164810949 + Bud31 protein_coding retained_intron MGP_NODShiLtJ_T0075480.1 MGP_NODShiLtJ_G0030161.1 mouse_genomes_project 5 164810805 164818617 + Bud31 protein_coding retained_intron MGP_NODShiLtJ_T0072944.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126657142 126772067 - MGP_NODShiLtJ_P0072944 protein_coding protein_coding MGP_NODShiLtJ_T0072945.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126657142 126771877 - MGP_NODShiLtJ_P0072945 protein_coding protein_coding MGP_NODShiLtJ_T0072946.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126657147 126772067 - MGP_NODShiLtJ_P0072946 protein_coding protein_coding MGP_NODShiLtJ_T0072947.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126660139 126660958 - protein_coding processed_transcript MGP_NODShiLtJ_T0072948.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126660303 126661577 - protein_coding retained_intron MGP_NODShiLtJ_T0072949.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126686529 126692977 - protein_coding retained_intron MGP_NODShiLtJ_T0072950.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126696770 126699942 - protein_coding retained_intron MGP_NODShiLtJ_T0072951.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126698149 126708751 - MGP_NODShiLtJ_P0072951 protein_coding protein_coding MGP_NODShiLtJ_T0072952.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126738474 126771935 - MGP_NODShiLtJ_P0072952 protein_coding protein_coding MGP_NODShiLtJ_T0072953.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126738872 126771505 - MGP_NODShiLtJ_P0072953 protein_coding protein_coding MGP_NODShiLtJ_T0072954.1 MGP_NODShiLtJ_G0029693.1 mouse_genomes_project 5 126756942 126772067 - protein_coding processed_transcript MGP_NODShiLtJ_T0001635.1 MGP_NODShiLtJ_G0001550.1 mouse_genomes_project 5 77135796 77136826 - TEC TEC MGP_NODShiLtJ_T0074321.1 MGP_NODShiLtJ_G0029941.1 mouse_genomes_project 5 148050088 148081604 + MGP_NODShiLtJ_P0074321 Crcp protein_coding protein_coding MGP_NODShiLtJ_T0074322.1 MGP_NODShiLtJ_G0029941.1 mouse_genomes_project 5 148050105 148081647 + Crcp protein_coding processed_transcript MGP_NODShiLtJ_T0074323.1 MGP_NODShiLtJ_G0029941.1 mouse_genomes_project 5 148050120 148081465 + Crcp protein_coding processed_transcript MGP_NODShiLtJ_T0074324.1 MGP_NODShiLtJ_G0029941.1 mouse_genomes_project 5 148050177 148081387 + MGP_NODShiLtJ_P0074324 Crcp protein_coding protein_coding MGP_NODShiLtJ_T0074325.1 MGP_NODShiLtJ_G0029941.1 mouse_genomes_project 5 148063741 148081943 + Crcp protein_coding processed_transcript MGP_NODShiLtJ_T0098207.1 MGP_NODShiLtJ_G0036619.1 mouse_genomes_project 5 153457278 153457407 - Gm25492 scaRNA scaRNA MGP_NODShiLtJ_T0014880.1 MGP_NODShiLtJ_G0012988.1 mouse_genomes_project 5 67240723 67241601 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075218.1 MGP_NODShiLtJ_G0030108.1 mouse_genomes_project 5 159998193 160013392 + MGP_NODShiLtJ_P0075218 Brat1 protein_coding protein_coding MGP_NODShiLtJ_T0075219.1 MGP_NODShiLtJ_G0030108.1 mouse_genomes_project 5 159998205 160013343 + MGP_NODShiLtJ_P0075219 Brat1 protein_coding protein_coding MGP_NODShiLtJ_T0075220.1 MGP_NODShiLtJ_G0030108.1 mouse_genomes_project 5 159998205 160013186 + MGP_NODShiLtJ_P0075220 Brat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075221.1 MGP_NODShiLtJ_G0030108.1 mouse_genomes_project 5 159998232 160009948 + Brat1 protein_coding retained_intron MGP_NODShiLtJ_T0075222.1 MGP_NODShiLtJ_G0030108.1 mouse_genomes_project 5 159998234 160009672 + Brat1 protein_coding retained_intron MGP_NODShiLtJ_T0075223.1 MGP_NODShiLtJ_G0030108.1 mouse_genomes_project 5 159998248 160013392 + MGP_NODShiLtJ_P0075223 Brat1 protein_coding protein_coding MGP_NODShiLtJ_T0001745.1 MGP_NODShiLtJ_G0001659.1 mouse_genomes_project 5 134626100 134626207 + TEC TEC MGP_NODShiLtJ_T0072215.1 MGP_NODShiLtJ_G0029533.1 mouse_genomes_project 5 103925761 103927829 + MGP_NODShiLtJ_P0072215 Cxcl2 protein_coding protein_coding MGP_NODShiLtJ_T0072216.1 MGP_NODShiLtJ_G0029533.1 mouse_genomes_project 5 103925763 103927829 + Cxcl2 protein_coding retained_intron MGP_NODShiLtJ_T0072217.1 MGP_NODShiLtJ_G0029533.1 mouse_genomes_project 5 103925763 103926252 + Cxcl2 protein_coding retained_intron MGP_NODShiLtJ_T0072218.1 MGP_NODShiLtJ_G0029533.1 mouse_genomes_project 5 103925763 103927829 + MGP_NODShiLtJ_P0072218 Cxcl2 protein_coding protein_coding MGP_NODShiLtJ_T0001561.1 MGP_NODShiLtJ_G0001477.1 mouse_genomes_project 5 56082650 56085531 + TEC TEC MGP_NODShiLtJ_T0071801.1 MGP_NODShiLtJ_G0029429.1 mouse_genomes_project 5 82439677 82465666 - MGP_NODShiLtJ_P0071801 Lrrc66 protein_coding protein_coding MGP_NODShiLtJ_T0071802.1 MGP_NODShiLtJ_G0029429.1 mouse_genomes_project 5 82462825 82463462 - MGP_NODShiLtJ_P0071802 Lrrc66 protein_coding protein_coding MGP_NODShiLtJ_T0017991.1 MGP_NODShiLtJ_G0015463.1 mouse_genomes_project 5 56031275 56035802 + 9230114K14Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017992.1 MGP_NODShiLtJ_G0015463.1 mouse_genomes_project 5 56031282 56039279 + 9230114K14Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017993.1 MGP_NODShiLtJ_G0015463.1 mouse_genomes_project 5 56031282 56125166 + 9230114K14Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017994.1 MGP_NODShiLtJ_G0015463.1 mouse_genomes_project 5 56031316 56090080 + 9230114K14Rik processed_transcript lincRNA MGP_NODShiLtJ_T0001602.1 MGP_NODShiLtJ_G0001517.1 mouse_genomes_project 5 73228659 73234471 + TEC TEC MGP_NODShiLtJ_T0011506.1 MGP_NODShiLtJ_G0009639.1 mouse_genomes_project 5 159031959 159032280 + Gm24146 misc_RNA misc_RNA MGP_NODShiLtJ_T0014743.1 MGP_NODShiLtJ_G0012851.1 mouse_genomes_project 5 11923648 11925170 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071381.1 MGP_NODShiLtJ_G0029358.1 mouse_genomes_project 5 57676823 57684389 - MGP_NODShiLtJ_P0071381 Cckar protein_coding protein_coding MGP_NODShiLtJ_T0071382.1 MGP_NODShiLtJ_G0029358.1 mouse_genomes_project 5 57683379 57684592 - Cckar protein_coding processed_transcript MGP_NODShiLtJ_T0074258.1 MGP_NODShiLtJ_G0029927.1 mouse_genomes_project 5 147575915 147603860 + MGP_NODShiLtJ_P0074258 Mmp17 protein_coding protein_coding MGP_NODShiLtJ_T0074259.1 MGP_NODShiLtJ_G0029927.1 mouse_genomes_project 5 147588064 147593927 + Mmp17 protein_coding retained_intron MGP_NODShiLtJ_T0072013.1 MGP_NODShiLtJ_G0029464.1 mouse_genomes_project 5 94378169 94479519 - MGP_NODShiLtJ_P0072013 protein_coding protein_coding MGP_NODShiLtJ_T0001670.1 MGP_NODShiLtJ_G0001584.1 mouse_genomes_project 5 102396031 102398166 + TEC TEC MGP_NODShiLtJ_T0014744.1 MGP_NODShiLtJ_G0012852.1 mouse_genomes_project 5 12906633 12907935 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008392.1 MGP_NODShiLtJ_G0006799.1 mouse_genomes_project 5 169760337 169795496 + BC028471 lincRNA lincRNA MGP_NODShiLtJ_T0008393.1 MGP_NODShiLtJ_G0006799.1 mouse_genomes_project 5 169761745 169777475 + BC028471 lincRNA lincRNA MGP_NODShiLtJ_T0008394.1 MGP_NODShiLtJ_G0006799.1 mouse_genomes_project 5 169761747 169788237 + BC028471 lincRNA lincRNA MGP_NODShiLtJ_T0008395.1 MGP_NODShiLtJ_G0006799.1 mouse_genomes_project 5 169761962 169794386 + BC028471 lincRNA lincRNA MGP_NODShiLtJ_T0008396.1 MGP_NODShiLtJ_G0006799.1 mouse_genomes_project 5 169777440 169795496 + BC028471 lincRNA lincRNA MGP_NODShiLtJ_T0008397.1 MGP_NODShiLtJ_G0006799.1 mouse_genomes_project 5 169777452 169778274 + BC028471 lincRNA lincRNA MGP_NODShiLtJ_T0073576.1 MGP_NODShiLtJ_G0029820.1 mouse_genomes_project 5 137972867 138011450 - MGP_NODShiLtJ_P0073576 protein_coding protein_coding MGP_NODShiLtJ_T0072071.1 MGP_NODShiLtJ_G0029483.1 mouse_genomes_project 5 99628280 99642696 - MGP_NODShiLtJ_P0072071 Ugt2b37 protein_coding protein_coding MGP_NODShiLtJ_T0069914.1 MGP_NODShiLtJ_G0029108.1 mouse_genomes_project 5 17819455 17893884 + MGP_NODShiLtJ_P0069914 protein_coding protein_coding MGP_NODShiLtJ_T0010569.1 MGP_NODShiLtJ_G0008702.1 mouse_genomes_project 5 36340240 36340303 + Mir7036b miRNA miRNA MGP_NODShiLtJ_T0001403.1 MGP_NODShiLtJ_G0001322.1 mouse_genomes_project 5 556595 561375 - TEC TEC MGP_NODShiLtJ_T0004593.1 MGP_NODShiLtJ_G0003977.1 mouse_genomes_project 5 29511426 30004209 + antisense antisense MGP_NODShiLtJ_T0004594.1 MGP_NODShiLtJ_G0003977.1 mouse_genomes_project 5 29520130 29768990 + antisense antisense MGP_NODShiLtJ_T0008249.1 MGP_NODShiLtJ_G0006697.1 mouse_genomes_project 5 132118358 132119126 - 1110006O24Rik lincRNA lincRNA MGP_NODShiLtJ_T0100626.1 MGP_NODShiLtJ_G0039020.1 mouse_genomes_project 5 100333229 100333352 - Gm24314 snoRNA snoRNA MGP_NODShiLtJ_T0074261.1 MGP_NODShiLtJ_G0029929.1 mouse_genomes_project 5 147678259 147688065 - Sept14 protein_coding processed_transcript MGP_NODShiLtJ_T0074262.1 MGP_NODShiLtJ_G0029929.1 mouse_genomes_project 5 147678270 147701826 - MGP_NODShiLtJ_P0074262 Sept14 protein_coding protein_coding MGP_NODShiLtJ_T0074263.1 MGP_NODShiLtJ_G0029929.1 mouse_genomes_project 5 147678307 147706557 - MGP_NODShiLtJ_P0074263 Sept14 protein_coding protein_coding MGP_NODShiLtJ_T0001418.1 MGP_NODShiLtJ_G0001337.1 mouse_genomes_project 5 12495247 12499154 + TEC TEC MGP_NODShiLtJ_T0001803.1 MGP_NODShiLtJ_G0001716.1 mouse_genomes_project 5 148263759 148266138 + TEC TEC MGP_NODShiLtJ_T0073994.1 MGP_NODShiLtJ_G0029882.1 mouse_genomes_project 5 141441527 141463872 + MGP_NODShiLtJ_P0073994 Denr protein_coding protein_coding MGP_NODShiLtJ_T0073995.1 MGP_NODShiLtJ_G0029882.1 mouse_genomes_project 5 141441621 141442861 + Denr protein_coding processed_transcript MGP_NODShiLtJ_T0073996.1 MGP_NODShiLtJ_G0029882.1 mouse_genomes_project 5 141441627 141445589 + Denr protein_coding retained_intron MGP_NODShiLtJ_T0073997.1 MGP_NODShiLtJ_G0029882.1 mouse_genomes_project 5 141441634 141442841 + Denr protein_coding retained_intron MGP_NODShiLtJ_T0073998.1 MGP_NODShiLtJ_G0029882.1 mouse_genomes_project 5 141441841 141462170 + MGP_NODShiLtJ_P0073998 Denr protein_coding protein_coding MGP_NODShiLtJ_T0071000.1 MGP_NODShiLtJ_G0029294.1 mouse_genomes_project 5 38365823 38369410 + MGP_NODShiLtJ_P0071000 Ccdc96 protein_coding protein_coding MGP_NODShiLtJ_T0014893.1 MGP_NODShiLtJ_G0013001.1 mouse_genomes_project 5 71524362 71525018 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014958.1 MGP_NODShiLtJ_G0013066.1 mouse_genomes_project 5 105551150 105552763 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072977.1 MGP_NODShiLtJ_G0029697.1 mouse_genomes_project 5 126848594 126849950 + MGP_NODShiLtJ_P0072977 Chek2 protein_coding protein_coding MGP_NODShiLtJ_T0072978.1 MGP_NODShiLtJ_G0029697.1 mouse_genomes_project 5 126848598 126883136 + MGP_NODShiLtJ_P0072978 Chek2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072979.1 MGP_NODShiLtJ_G0029697.1 mouse_genomes_project 5 126848615 126883148 + MGP_NODShiLtJ_P0072979 Chek2 protein_coding protein_coding MGP_NODShiLtJ_T0072980.1 MGP_NODShiLtJ_G0029697.1 mouse_genomes_project 5 126848844 126849956 + MGP_NODShiLtJ_P0072980 Chek2 protein_coding protein_coding MGP_NODShiLtJ_T0072981.1 MGP_NODShiLtJ_G0029697.1 mouse_genomes_project 5 126850070 126859085 + Chek2 protein_coding retained_intron MGP_NODShiLtJ_T0004664.1 MGP_NODShiLtJ_G0004034.1 mouse_genomes_project 5 86015607 86016085 + antisense antisense MGP_NODShiLtJ_T0004665.1 MGP_NODShiLtJ_G0004034.1 mouse_genomes_project 5 86015847 86026389 + antisense antisense MGP_NODShiLtJ_T0069861.1 MGP_NODShiLtJ_G0029098.1 mouse_genomes_project 5 7210207 7500565 - MGP_NODShiLtJ_P0069861 Grm3 protein_coding protein_coding MGP_NODShiLtJ_T0069829.1 MGP_NODShiLtJ_G0029094.1 mouse_genomes_project 5 6630576 6666120 - MGP_NODShiLtJ_P0069829 Crot protein_coding protein_coding MGP_NODShiLtJ_T0069830.1 MGP_NODShiLtJ_G0029094.1 mouse_genomes_project 5 6639504 6648997 - Crot protein_coding processed_transcript MGP_NODShiLtJ_T0069831.1 MGP_NODShiLtJ_G0029094.1 mouse_genomes_project 5 6653036 6665851 - Crot protein_coding retained_intron MGP_NODShiLtJ_T0010573.1 MGP_NODShiLtJ_G0008706.1 mouse_genomes_project 5 44409495 44409577 + Mir6414 miRNA miRNA MGP_NODShiLtJ_T0070315.1 MGP_NODShiLtJ_G0029188.1 mouse_genomes_project 5 31398386 31410460 - MGP_NODShiLtJ_P0070315 Adgrf3 protein_coding protein_coding MGP_NODShiLtJ_T0070316.1 MGP_NODShiLtJ_G0029188.1 mouse_genomes_project 5 31398390 31401374 - MGP_NODShiLtJ_P0070316 Adgrf3 protein_coding protein_coding MGP_NODShiLtJ_T0070317.1 MGP_NODShiLtJ_G0029188.1 mouse_genomes_project 5 31407262 31409325 - Adgrf3 protein_coding processed_transcript MGP_NODShiLtJ_T0101958.1 MGP_NODShiLtJ_G0040126.1 mouse_genomes_project 5 109750137 109752627 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0071396.1 MGP_NODShiLtJ_G0029361.1 mouse_genomes_project 5 63003706 63580902 + MGP_NODShiLtJ_P0071396 Pcdh7 protein_coding protein_coding MGP_NODShiLtJ_T0071397.1 MGP_NODShiLtJ_G0029361.1 mouse_genomes_project 5 63003759 63017631 + MGP_NODShiLtJ_P0071397 Pcdh7 protein_coding protein_coding MGP_NODShiLtJ_T0071398.1 MGP_NODShiLtJ_G0029361.1 mouse_genomes_project 5 63004837 63577014 + MGP_NODShiLtJ_P0071398 Pcdh7 protein_coding protein_coding MGP_NODShiLtJ_T0071399.1 MGP_NODShiLtJ_G0029361.1 mouse_genomes_project 5 63006902 63577460 + MGP_NODShiLtJ_P0071399 Pcdh7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071400.1 MGP_NODShiLtJ_G0029361.1 mouse_genomes_project 5 63007653 63223345 + MGP_NODShiLtJ_P0071400 Pcdh7 protein_coding protein_coding MGP_NODShiLtJ_T0071401.1 MGP_NODShiLtJ_G0029361.1 mouse_genomes_project 5 63007949 63577117 + MGP_NODShiLtJ_P0071401 Pcdh7 protein_coding protein_coding MGP_NODShiLtJ_T0075047.1 MGP_NODShiLtJ_G0030073.1 mouse_genomes_project 5 157691201 157707265 - MGP_NODShiLtJ_P0075047 Zfp68 protein_coding protein_coding MGP_NODShiLtJ_T0075048.1 MGP_NODShiLtJ_G0030073.1 mouse_genomes_project 5 157692534 157707262 - MGP_NODShiLtJ_P0075048 Zfp68 protein_coding protein_coding MGP_NODShiLtJ_T0075049.1 MGP_NODShiLtJ_G0030073.1 mouse_genomes_project 5 157693664 157694606 - Zfp68 protein_coding processed_transcript MGP_NODShiLtJ_T0075050.1 MGP_NODShiLtJ_G0030073.1 mouse_genomes_project 5 157693668 157707244 - MGP_NODShiLtJ_P0075050 Zfp68 protein_coding protein_coding MGP_NODShiLtJ_T0075051.1 MGP_NODShiLtJ_G0030073.1 mouse_genomes_project 5 157699656 157707157 - MGP_NODShiLtJ_P0075051 Zfp68 protein_coding protein_coding MGP_NODShiLtJ_T0075052.1 MGP_NODShiLtJ_G0030073.1 mouse_genomes_project 5 157703701 157707242 - Zfp68 protein_coding retained_intron MGP_NODShiLtJ_T0069811.1 MGP_NODShiLtJ_G0029090.1 mouse_genomes_project 5 6287418 6287879 + MGP_NODShiLtJ_P0069811 Gm10250 protein_coding protein_coding MGP_NODShiLtJ_T0008127.1 MGP_NODShiLtJ_G0006616.1 mouse_genomes_project 5 101607701 101629299 + Gm42912 lincRNA lincRNA MGP_NODShiLtJ_T0004713.1 MGP_NODShiLtJ_G0004066.1 mouse_genomes_project 5 126204091 126222791 + Gm15788 antisense antisense MGP_NODShiLtJ_T0008042.1 MGP_NODShiLtJ_G0006547.1 mouse_genomes_project 5 41558299 41584072 + Gm42524 lincRNA lincRNA MGP_NODShiLtJ_T0071721.1 MGP_NODShiLtJ_G0029416.1 mouse_genomes_project 5 81326048 81368352 - MGP_NODShiLtJ_P0071721 Cnga1 protein_coding protein_coding MGP_NODShiLtJ_T0071722.1 MGP_NODShiLtJ_G0029416.1 mouse_genomes_project 5 81326048 81341411 - MGP_NODShiLtJ_P0071722 Cnga1 protein_coding protein_coding MGP_NODShiLtJ_T0071723.1 MGP_NODShiLtJ_G0029416.1 mouse_genomes_project 5 81326467 81363488 - MGP_NODShiLtJ_P0071723 Cnga1 protein_coding protein_coding MGP_NODShiLtJ_T0071724.1 MGP_NODShiLtJ_G0029416.1 mouse_genomes_project 5 81337390 81363493 - MGP_NODShiLtJ_P0071724 Cnga1 protein_coding protein_coding MGP_NODShiLtJ_T0071725.1 MGP_NODShiLtJ_G0029416.1 mouse_genomes_project 5 81341285 81356734 - MGP_NODShiLtJ_P0071725 Cnga1 protein_coding protein_coding MGP_NODShiLtJ_T0071726.1 MGP_NODShiLtJ_G0029416.1 mouse_genomes_project 5 81367871 81369866 - Cnga1 protein_coding retained_intron MGP_NODShiLtJ_T0072771.1 MGP_NODShiLtJ_G0029653.1 mouse_genomes_project 5 123653098 123654789 + protein_coding processed_transcript MGP_NODShiLtJ_T0075516.1 MGP_NODShiLtJ_G0030172.1 mouse_genomes_project 5 165161295 165239623 - MGP_NODShiLtJ_P0075516 protein_coding protein_coding MGP_NODShiLtJ_T0075310.1 MGP_NODShiLtJ_G0030127.1 mouse_genomes_project 5 162705807 162715122 - MGP_NODShiLtJ_P0075310 Spdye4a protein_coding protein_coding MGP_NODShiLtJ_T0008414.1 MGP_NODShiLtJ_G0006812.1 mouse_genomes_project 5 172319789 172331469 + lincRNA lincRNA MGP_NODShiLtJ_T0004792.1 MGP_NODShiLtJ_G0004122.1 mouse_genomes_project 5 152787479 152789520 + Gm42882 antisense antisense MGP_NODShiLtJ_T0073768.1 MGP_NODShiLtJ_G0029851.1 mouse_genomes_project 5 139743275 139755586 + Arpc3 protein_coding retained_intron MGP_NODShiLtJ_T0073769.1 MGP_NODShiLtJ_G0029851.1 mouse_genomes_project 5 139743319 139748602 + Arpc3 protein_coding retained_intron MGP_NODShiLtJ_T0073770.1 MGP_NODShiLtJ_G0029851.1 mouse_genomes_project 5 139743345 139764356 + MGP_NODShiLtJ_P0073770 Arpc3 protein_coding protein_coding MGP_NODShiLtJ_T0073771.1 MGP_NODShiLtJ_G0029851.1 mouse_genomes_project 5 139748275 139769004 + MGP_NODShiLtJ_P0073771 Arpc3 protein_coding protein_coding MGP_NODShiLtJ_T0073772.1 MGP_NODShiLtJ_G0029851.1 mouse_genomes_project 5 139753538 139759376 + MGP_NODShiLtJ_P0073772 Arpc3 protein_coding protein_coding MGP_NODShiLtJ_T0073773.1 MGP_NODShiLtJ_G0029851.1 mouse_genomes_project 5 139753665 139759367 + MGP_NODShiLtJ_P0073773 Arpc3 protein_coding protein_coding MGP_NODShiLtJ_T0073774.1 MGP_NODShiLtJ_G0029851.1 mouse_genomes_project 5 139756673 139758049 + Arpc3 protein_coding retained_intron MGP_NODShiLtJ_T0074598.1 MGP_NODShiLtJ_G0029988.1 mouse_genomes_project 5 154094606 154109252 + MGP_NODShiLtJ_P0074598 Rhbdd2 protein_coding protein_coding MGP_NODShiLtJ_T0074599.1 MGP_NODShiLtJ_G0029988.1 mouse_genomes_project 5 154094642 154109324 + MGP_NODShiLtJ_P0074599 Rhbdd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074600.1 MGP_NODShiLtJ_G0029988.1 mouse_genomes_project 5 154094692 154099595 + Rhbdd2 protein_coding processed_transcript MGP_NODShiLtJ_T0074601.1 MGP_NODShiLtJ_G0029988.1 mouse_genomes_project 5 154094704 154097599 + Rhbdd2 protein_coding retained_intron MGP_NODShiLtJ_T0074602.1 MGP_NODShiLtJ_G0029988.1 mouse_genomes_project 5 154094711 154098529 + Rhbdd2 protein_coding retained_intron MGP_NODShiLtJ_T0074603.1 MGP_NODShiLtJ_G0029988.1 mouse_genomes_project 5 154097085 154102278 + MGP_NODShiLtJ_P0074603 Rhbdd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074604.1 MGP_NODShiLtJ_G0029988.1 mouse_genomes_project 5 154098515 154107403 + Rhbdd2 protein_coding retained_intron MGP_NODShiLtJ_T0072107.1 MGP_NODShiLtJ_G0029497.1 mouse_genomes_project 5 100574244 100590899 + MGP_NODShiLtJ_P0072107 Csn3 protein_coding protein_coding MGP_NODShiLtJ_T0072108.1 MGP_NODShiLtJ_G0029497.1 mouse_genomes_project 5 100574249 100589336 + Csn3 protein_coding retained_intron MGP_NODShiLtJ_T0072109.1 MGP_NODShiLtJ_G0029497.1 mouse_genomes_project 5 100574264 100589336 + Csn3 protein_coding retained_intron MGP_NODShiLtJ_T0072110.1 MGP_NODShiLtJ_G0029497.1 mouse_genomes_project 5 100587892 100590022 + Csn3 protein_coding retained_intron MGP_NODShiLtJ_T0001436.1 MGP_NODShiLtJ_G0001355.1 mouse_genomes_project 5 21577954 21578901 + TEC TEC MGP_NODShiLtJ_T0001553.1 MGP_NODShiLtJ_G0001469.1 mouse_genomes_project 5 55301750 55305201 - TEC TEC MGP_NODShiLtJ_T0008298.1 MGP_NODShiLtJ_G0006732.1 mouse_genomes_project 5 143579371 143604146 + 1700048F04Rik lincRNA lincRNA MGP_NODShiLtJ_T0075162.1 MGP_NODShiLtJ_G0030094.1 mouse_genomes_project 5 158982521 158994566 - MGP_NODShiLtJ_P0075162 Tmem184a protein_coding protein_coding MGP_NODShiLtJ_T0075163.1 MGP_NODShiLtJ_G0030094.1 mouse_genomes_project 5 158984988 158995614 - MGP_NODShiLtJ_P0075163 Tmem184a protein_coding protein_coding MGP_NODShiLtJ_T0075164.1 MGP_NODShiLtJ_G0030094.1 mouse_genomes_project 5 158987303 158988017 - Tmem184a protein_coding retained_intron MGP_NODShiLtJ_T0075166.1 MGP_NODShiLtJ_G0030094.1 mouse_genomes_project 5 158988526 158995373 - MGP_NODShiLtJ_P0075166 Tmem184a protein_coding protein_coding MGP_NODShiLtJ_T0075167.1 MGP_NODShiLtJ_G0030094.1 mouse_genomes_project 5 158994330 159003596 - MGP_NODShiLtJ_P0075167 Tmem184a protein_coding protein_coding MGP_NODShiLtJ_T0008086.1 MGP_NODShiLtJ_G0006584.1 mouse_genomes_project 5 71999080 72002138 - Gm26761 lincRNA lincRNA MGP_NODShiLtJ_T0075320.1 MGP_NODShiLtJ_G0030131.1 mouse_genomes_project 5 162804793 162818664 - E130309D02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0075321.1 MGP_NODShiLtJ_G0030131.1 mouse_genomes_project 5 162804805 162818960 - MGP_NODShiLtJ_P0075321 E130309D02Rik protein_coding protein_coding MGP_NODShiLtJ_T0075322.1 MGP_NODShiLtJ_G0030131.1 mouse_genomes_project 5 162804807 162818731 - E130309D02Rik protein_coding retained_intron MGP_NODShiLtJ_T0075323.1 MGP_NODShiLtJ_G0030131.1 mouse_genomes_project 5 162811902 162818940 - E130309D02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0001422.1 MGP_NODShiLtJ_G0001341.1 mouse_genomes_project 5 13120792 13122699 + TEC TEC MGP_NODShiLtJ_T0001775.1 MGP_NODShiLtJ_G0001689.1 mouse_genomes_project 5 140535441 140537000 + TEC TEC MGP_NODShiLtJ_T0098203.1 MGP_NODShiLtJ_G0036615.1 mouse_genomes_project 5 2064157 2064285 - Gm22897 scaRNA scaRNA MGP_NODShiLtJ_T0074894.1 MGP_NODShiLtJ_G0030040.1 mouse_genomes_project 5 156368977 156370511 + MGP_NODShiLtJ_P0074894 Sap25 protein_coding protein_coding MGP_NODShiLtJ_T0074895.1 MGP_NODShiLtJ_G0030040.1 mouse_genomes_project 5 156369080 156370545 + MGP_NODShiLtJ_P0074895 Sap25 protein_coding protein_coding MGP_NODShiLtJ_T0074896.1 MGP_NODShiLtJ_G0030040.1 mouse_genomes_project 5 156369138 156369984 + Sap25 protein_coding retained_intron MGP_NODShiLtJ_T0074897.1 MGP_NODShiLtJ_G0030040.1 mouse_genomes_project 5 156369586 156370190 + Sap25 protein_coding retained_intron MGP_NODShiLtJ_T0074898.1 MGP_NODShiLtJ_G0030040.1 mouse_genomes_project 5 156369820 156370480 + Sap25 protein_coding retained_intron MGP_NODShiLtJ_T0074899.1 MGP_NODShiLtJ_G0030040.1 mouse_genomes_project 5 156369991 156370542 + Sap25 protein_coding retained_intron MGP_NODShiLtJ_T0014990.1 MGP_NODShiLtJ_G0013098.1 mouse_genomes_project 5 122651042 122653516 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008108.1 MGP_NODShiLtJ_G0006601.1 mouse_genomes_project 5 84844679 84848399 - Gm28865 lincRNA lincRNA MGP_NODShiLtJ_T0069862.1 MGP_NODShiLtJ_G0029099.1 mouse_genomes_project 5 7961988 7964846 + MGP_NODShiLtJ_P0069862 protein_coding protein_coding MGP_NODShiLtJ_T0072403.1 MGP_NODShiLtJ_G0029574.1 mouse_genomes_project 5 112441808 112467358 + MGP_NODShiLtJ_P0072403 Fgf5 protein_coding protein_coding MGP_NODShiLtJ_T0072404.1 MGP_NODShiLtJ_G0029574.1 mouse_genomes_project 5 112442038 112465797 + MGP_NODShiLtJ_P0072404 Fgf5 protein_coding protein_coding MGP_NODShiLtJ_T0001689.1 MGP_NODShiLtJ_G0001603.1 mouse_genomes_project 5 114912952 114914785 + TEC TEC MGP_NODShiLtJ_T0008252.1 MGP_NODShiLtJ_G0006699.1 mouse_genomes_project 5 132895092 132897307 + Gm13839 lincRNA lincRNA MGP_NODShiLtJ_T0075777.1 MGP_NODShiLtJ_G0030224.1 mouse_genomes_project 5 171652655 172036591 - MGP_NODShiLtJ_P0075777 Gm42906 protein_coding protein_coding MGP_NODShiLtJ_T0008025.1 MGP_NODShiLtJ_G0006538.1 mouse_genomes_project 5 37215746 37225063 - E130018O15Rik lincRNA lincRNA MGP_NODShiLtJ_T0004719.1 MGP_NODShiLtJ_G0004072.1 mouse_genomes_project 5 128972970 128981377 + 1700095B10Rik antisense antisense MGP_NODShiLtJ_T0004720.1 MGP_NODShiLtJ_G0004072.1 mouse_genomes_project 5 128972978 128975370 + 1700095B10Rik antisense antisense MGP_NODShiLtJ_T0004721.1 MGP_NODShiLtJ_G0004072.1 mouse_genomes_project 5 128972987 128981325 + 1700095B10Rik antisense antisense MGP_NODShiLtJ_T0004722.1 MGP_NODShiLtJ_G0004072.1 mouse_genomes_project 5 128973010 128975621 + 1700095B10Rik antisense antisense MGP_NODShiLtJ_T0010624.1 MGP_NODShiLtJ_G0008757.1 mouse_genomes_project 5 156247223 156247338 - Mir6418 miRNA miRNA MGP_NODShiLtJ_T0072423.1 MGP_NODShiLtJ_G0029580.1 mouse_genomes_project 5 113651161 114119186 - MGP_NODShiLtJ_P0072423 protein_coding protein_coding MGP_NODShiLtJ_T0072424.1 MGP_NODShiLtJ_G0029580.1 mouse_genomes_project 5 113735845 114119203 - MGP_NODShiLtJ_P0072424 protein_coding protein_coding MGP_NODShiLtJ_T0072425.1 MGP_NODShiLtJ_G0029580.1 mouse_genomes_project 5 113932249 114119206 - protein_coding retained_intron MGP_NODShiLtJ_T0072426.1 MGP_NODShiLtJ_G0029580.1 mouse_genomes_project 5 114069265 114118962 - protein_coding processed_transcript MGP_NODShiLtJ_T0072427.1 MGP_NODShiLtJ_G0029580.1 mouse_genomes_project 5 114113587 114119197 - MGP_NODShiLtJ_P0072427 protein_coding protein_coding MGP_NODShiLtJ_T0015035.1 MGP_NODShiLtJ_G0013143.1 mouse_genomes_project 5 140957262 140957640 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004616.1 MGP_NODShiLtJ_G0003997.1 mouse_genomes_project 5 40305022 40308587 - Gm26560 antisense antisense MGP_NODShiLtJ_T0008128.1 MGP_NODShiLtJ_G0006617.1 mouse_genomes_project 5 103842402 103846026 + Gm43086 lincRNA lincRNA MGP_NODShiLtJ_T0001437.1 MGP_NODShiLtJ_G0001356.1 mouse_genomes_project 5 22465929 22467820 - TEC TEC MGP_NODShiLtJ_T0070517.1 MGP_NODShiLtJ_G0029220.1 mouse_genomes_project 5 32439701 32457418 - MGP_NODShiLtJ_P0070517 Ppm1g protein_coding protein_coding MGP_NODShiLtJ_T0070518.1 MGP_NODShiLtJ_G0029220.1 mouse_genomes_project 5 32439705 32457540 - MGP_NODShiLtJ_P0070518 Ppm1g protein_coding protein_coding MGP_NODShiLtJ_T0070519.1 MGP_NODShiLtJ_G0029220.1 mouse_genomes_project 5 32440139 32442121 - Ppm1g protein_coding retained_intron MGP_NODShiLtJ_T0070521.1 MGP_NODShiLtJ_G0029220.1 mouse_genomes_project 5 32442129 32444703 - MGP_NODShiLtJ_P0070521 Ppm1g protein_coding protein_coding MGP_NODShiLtJ_T0070522.1 MGP_NODShiLtJ_G0029220.1 mouse_genomes_project 5 32455758 32457418 - Ppm1g protein_coding retained_intron MGP_NODShiLtJ_T0008136.1 MGP_NODShiLtJ_G0006625.1 mouse_genomes_project 5 110857714 110862063 + 1700016F12Rik lincRNA lincRNA MGP_NODShiLtJ_T0069751.1 MGP_NODShiLtJ_G0029079.1 mouse_genomes_project 5 2959352 2972921 - MGP_NODShiLtJ_P0069751 Steap1 protein_coding protein_coding MGP_NODShiLtJ_T0069752.1 MGP_NODShiLtJ_G0029079.1 mouse_genomes_project 5 2959360 2963387 - MGP_NODShiLtJ_P0069752 Steap1 protein_coding protein_coding MGP_NODShiLtJ_T0072402.1 MGP_NODShiLtJ_G0029573.1 mouse_genomes_project 5 112369348 112377344 + MGP_NODShiLtJ_P0072402 Prdm8 protein_coding protein_coding MGP_NODShiLtJ_T0071332.1 MGP_NODShiLtJ_G0029351.1 mouse_genomes_project 5 56619288 56647804 + MGP_NODShiLtJ_P0071332 Pi4k2b protein_coding protein_coding MGP_NODShiLtJ_T0071333.1 MGP_NODShiLtJ_G0029351.1 mouse_genomes_project 5 56619320 56629874 + MGP_NODShiLtJ_P0071333 Pi4k2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071334.1 MGP_NODShiLtJ_G0029351.1 mouse_genomes_project 5 56619324 56647804 + MGP_NODShiLtJ_P0071334 Pi4k2b protein_coding protein_coding MGP_NODShiLtJ_T0071335.1 MGP_NODShiLtJ_G0029351.1 mouse_genomes_project 5 56632962 56635843 + Pi4k2b protein_coding retained_intron MGP_NODShiLtJ_T0011721.1 MGP_NODShiLtJ_G0009832.1 mouse_genomes_project 5 120193970 120444786 - MGP_NODShiLtJ_P0011721 polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0014932.1 MGP_NODShiLtJ_G0013040.1 mouse_genomes_project 5 96276852 96277966 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100644.1 MGP_NODShiLtJ_G0039038.1 mouse_genomes_project 5 164383368 164383497 + Gm23995 snoRNA snoRNA MGP_NODShiLtJ_T0008399.1 MGP_NODShiLtJ_G0006801.1 mouse_genomes_project 5 170262711 170272453 - Gm21221 lincRNA lincRNA MGP_NODShiLtJ_T0071881.1 MGP_NODShiLtJ_G0029444.1 mouse_genomes_project 5 85191078 85219568 + MGP_NODShiLtJ_P0071881 Tmem165 protein_coding protein_coding MGP_NODShiLtJ_T0071882.1 MGP_NODShiLtJ_G0029444.1 mouse_genomes_project 5 85191148 85204755 + Tmem165 protein_coding processed_transcript MGP_NODShiLtJ_T0071883.1 MGP_NODShiLtJ_G0029444.1 mouse_genomes_project 5 85209416 85214955 + MGP_NODShiLtJ_P0071883 Tmem165 protein_coding protein_coding MGP_NODShiLtJ_T0071884.1 MGP_NODShiLtJ_G0029444.1 mouse_genomes_project 5 85209744 85215455 + Tmem165 protein_coding retained_intron MGP_NODShiLtJ_T0071885.1 MGP_NODShiLtJ_G0029444.1 mouse_genomes_project 5 85214419 85216352 + Tmem165 protein_coding processed_transcript MGP_NODShiLtJ_T0004723.1 MGP_NODShiLtJ_G0004073.1 mouse_genomes_project 5 129894858 129895578 + Gm15736 antisense antisense MGP_NODShiLtJ_T0073613.1 MGP_NODShiLtJ_G0029827.1 mouse_genomes_project 5 138630101 138654029 - MGP_NODShiLtJ_P0073613 Erp29 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073616.1 MGP_NODShiLtJ_G0029827.1 mouse_genomes_project 5 138642327 138654048 - MGP_NODShiLtJ_P0073616 Erp29 protein_coding protein_coding MGP_NODShiLtJ_T0073617.1 MGP_NODShiLtJ_G0029827.1 mouse_genomes_project 5 138646260 138654038 - MGP_NODShiLtJ_P0073617 Erp29 protein_coding protein_coding MGP_NODShiLtJ_T0073618.1 MGP_NODShiLtJ_G0029827.1 mouse_genomes_project 5 138646745 138653890 - MGP_NODShiLtJ_P0073618 Erp29 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0007995.1 MGP_NODShiLtJ_G0006518.1 mouse_genomes_project 5 26320921 26323395 + 4831440E17Rik lincRNA lincRNA MGP_NODShiLtJ_T0074100.1 MGP_NODShiLtJ_G0029898.1 mouse_genomes_project 5 142087020 142126136 - MGP_NODShiLtJ_P0074100 Rilpl1 protein_coding protein_coding MGP_NODShiLtJ_T0074101.1 MGP_NODShiLtJ_G0029898.1 mouse_genomes_project 5 142087477 142098745 - MGP_NODShiLtJ_P0074101 Rilpl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074102.1 MGP_NODShiLtJ_G0029898.1 mouse_genomes_project 5 142087592 142109435 - MGP_NODShiLtJ_P0074102 Rilpl1 protein_coding protein_coding MGP_NODShiLtJ_T0074103.1 MGP_NODShiLtJ_G0029898.1 mouse_genomes_project 5 142087604 142109519 - MGP_NODShiLtJ_P0074103 Rilpl1 protein_coding protein_coding MGP_NODShiLtJ_T0001489.1 MGP_NODShiLtJ_G0001405.1 mouse_genomes_project 5 45881094 45882306 + TEC TEC MGP_NODShiLtJ_T0008404.1 MGP_NODShiLtJ_G0006805.1 mouse_genomes_project 5 171113133 171113399 - Gm43690 lincRNA lincRNA MGP_NODShiLtJ_T0001487.1 MGP_NODShiLtJ_G0001403.1 mouse_genomes_project 5 45743877 45748251 - TEC TEC MGP_NODShiLtJ_T0008370.1 MGP_NODShiLtJ_G0006781.1 mouse_genomes_project 5 167571702 167575276 + D5Ertd605e lincRNA lincRNA MGP_NODShiLtJ_T0073660.1 MGP_NODShiLtJ_G0029836.1 mouse_genomes_project 5 138925581 138955385 + MGP_NODShiLtJ_P0073660 Brap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073661.1 MGP_NODShiLtJ_G0029836.1 mouse_genomes_project 5 138925608 138928990 + Brap protein_coding retained_intron MGP_NODShiLtJ_T0073662.1 MGP_NODShiLtJ_G0029836.1 mouse_genomes_project 5 138925774 138955391 + MGP_NODShiLtJ_P0073662 Brap protein_coding protein_coding MGP_NODShiLtJ_T0073663.1 MGP_NODShiLtJ_G0029836.1 mouse_genomes_project 5 138927057 138941838 + MGP_NODShiLtJ_P0073663 Brap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073664.1 MGP_NODShiLtJ_G0029836.1 mouse_genomes_project 5 138927096 138928722 + Brap protein_coding retained_intron MGP_NODShiLtJ_T0073665.1 MGP_NODShiLtJ_G0029836.1 mouse_genomes_project 5 138933063 138955390 + Brap protein_coding processed_transcript MGP_NODShiLtJ_T0073666.1 MGP_NODShiLtJ_G0029836.1 mouse_genomes_project 5 138950567 138955387 + Brap protein_coding retained_intron MGP_NODShiLtJ_T0101972.1 MGP_NODShiLtJ_G0040140.1 mouse_genomes_project 5 172045095 172071721 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008260.1 MGP_NODShiLtJ_G0006706.1 mouse_genomes_project 5 134100522 134104882 + Gm15728 lincRNA lincRNA MGP_NODShiLtJ_T0008261.1 MGP_NODShiLtJ_G0006706.1 mouse_genomes_project 5 134100598 134101968 + Gm15728 lincRNA lincRNA MGP_NODShiLtJ_T0075366.1 MGP_NODShiLtJ_G0030140.1 mouse_genomes_project 5 163365458 163403819 + MGP_NODShiLtJ_P0075366 Eif2ak1 protein_coding protein_coding MGP_NODShiLtJ_T0075367.1 MGP_NODShiLtJ_G0030140.1 mouse_genomes_project 5 163365501 163379717 + Eif2ak1 protein_coding retained_intron MGP_NODShiLtJ_T0075368.1 MGP_NODShiLtJ_G0030140.1 mouse_genomes_project 5 163365617 163373008 + Eif2ak1 protein_coding retained_intron MGP_NODShiLtJ_T0100603.1 MGP_NODShiLtJ_G0038997.1 mouse_genomes_project 5 22888818 22888932 - Gm25459 snoRNA snoRNA MGP_NODShiLtJ_T0008049.1 MGP_NODShiLtJ_G0006552.1 mouse_genomes_project 5 45982244 45986037 - lincRNA lincRNA MGP_NODShiLtJ_T0015040.1 MGP_NODShiLtJ_G0013148.1 mouse_genomes_project 5 151776546 151777512 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072124.1 MGP_NODShiLtJ_G0029507.1 mouse_genomes_project 5 101209405 101221617 + MGP_NODShiLtJ_P0072124 Ambn protein_coding protein_coding MGP_NODShiLtJ_T0072125.1 MGP_NODShiLtJ_G0029507.1 mouse_genomes_project 5 101209425 101222013 + MGP_NODShiLtJ_P0072125 Ambn protein_coding protein_coding MGP_NODShiLtJ_T0004777.1 MGP_NODShiLtJ_G0004110.1 mouse_genomes_project 5 141803758 141804470 + Gm42425 antisense antisense MGP_NODShiLtJ_T0074216.1 MGP_NODShiLtJ_G0029920.1 mouse_genomes_project 5 146483213 146486461 + MGP_NODShiLtJ_P0074216 Fzd10 protein_coding protein_coding MGP_NODShiLtJ_T0071030.1 MGP_NODShiLtJ_G0029297.1 mouse_genomes_project 5 38622928 38624201 - MGP_NODShiLtJ_P0071030 Bloc1s4 protein_coding protein_coding MGP_NODShiLtJ_T0098402.1 MGP_NODShiLtJ_G0036807.1 mouse_genomes_project 5 81993628 81996118 - Gm17207 sense_intronic sense_intronic MGP_NODShiLtJ_T0014788.1 MGP_NODShiLtJ_G0012896.1 mouse_genomes_project 5 25914689 25915255 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014822.1 MGP_NODShiLtJ_G0012930.1 mouse_genomes_project 5 34651089 34657349 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071739.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81484604 81599980 - MGP_NODShiLtJ_P0071739 Tec protein_coding protein_coding MGP_NODShiLtJ_T0071740.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81484611 81599995 - MGP_NODShiLtJ_P0071740 Tec protein_coding protein_coding MGP_NODShiLtJ_T0071741.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81484622 81599932 - MGP_NODShiLtJ_P0071741 Tec protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071742.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81484626 81599982 - MGP_NODShiLtJ_P0071742 Tec protein_coding protein_coding MGP_NODShiLtJ_T0071743.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81484626 81516010 - MGP_NODShiLtJ_P0071743 Tec protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071744.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81484626 81600019 - MGP_NODShiLtJ_P0071744 Tec protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071745.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81502567 81599985 - MGP_NODShiLtJ_P0071745 Tec protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071746.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81552799 81599979 - Tec protein_coding retained_intron MGP_NODShiLtJ_T0071747.1 MGP_NODShiLtJ_G0029419.1 mouse_genomes_project 5 81553103 81574542 - MGP_NODShiLtJ_P0071747 Tec protein_coding protein_coding MGP_NODShiLtJ_T0001588.1 MGP_NODShiLtJ_G0001503.1 mouse_genomes_project 5 72139604 72141317 + TEC TEC MGP_NODShiLtJ_T0004761.1 MGP_NODShiLtJ_G0004100.1 mouse_genomes_project 5 139349381 139353752 + Gm3970 antisense antisense MGP_NODShiLtJ_T0075646.1 MGP_NODShiLtJ_G0030204.1 mouse_genomes_project 5 168800273 168853170 - MGP_NODShiLtJ_P0075646 Ubl3 protein_coding protein_coding MGP_NODShiLtJ_T0075647.1 MGP_NODShiLtJ_G0030204.1 mouse_genomes_project 5 168800767 168853297 - MGP_NODShiLtJ_P0075647 Ubl3 protein_coding protein_coding MGP_NODShiLtJ_T0075648.1 MGP_NODShiLtJ_G0030204.1 mouse_genomes_project 5 168800780 168853297 - MGP_NODShiLtJ_P0075648 Ubl3 protein_coding protein_coding MGP_NODShiLtJ_T0075649.1 MGP_NODShiLtJ_G0030204.1 mouse_genomes_project 5 168801616 168837672 - Ubl3 protein_coding processed_transcript MGP_NODShiLtJ_T0075650.1 MGP_NODShiLtJ_G0030204.1 mouse_genomes_project 5 168804907 168852171 - Ubl3 protein_coding processed_transcript MGP_NODShiLtJ_T0075651.1 MGP_NODShiLtJ_G0030204.1 mouse_genomes_project 5 168804917 168852163 - Ubl3 protein_coding processed_transcript MGP_NODShiLtJ_T0075652.1 MGP_NODShiLtJ_G0030204.1 mouse_genomes_project 5 168847102 168853206 - Ubl3 protein_coding retained_intron MGP_NODShiLtJ_T0098056.1 MGP_NODShiLtJ_G0036468.1 mouse_genomes_project 5 152744821 152744935 + n-R5s178 rRNA rRNA MGP_NODShiLtJ_T0099396.1 MGP_NODShiLtJ_G0037790.1 mouse_genomes_project 5 141123844 141123991 + Gm24840 snRNA snRNA MGP_NODShiLtJ_T0015057.1 MGP_NODShiLtJ_G0013165.1 mouse_genomes_project 5 156951644 156951846 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098421.1 MGP_NODShiLtJ_G0036824.1 mouse_genomes_project 5 163900535 163903659 + Dmrt1i sense_intronic sense_intronic MGP_NODShiLtJ_T0098422.1 MGP_NODShiLtJ_G0036824.1 mouse_genomes_project 5 163901137 163903616 + Dmrt1i sense_intronic sense_intronic MGP_NODShiLtJ_T0098423.1 MGP_NODShiLtJ_G0036824.1 mouse_genomes_project 5 163901137 163903616 + Dmrt1i sense_intronic sense_intronic MGP_NODShiLtJ_T0001841.1 MGP_NODShiLtJ_G0001753.1 mouse_genomes_project 5 153688239 153689043 + TEC TEC MGP_NODShiLtJ_T0017986.1 MGP_NODShiLtJ_G0015461.1 mouse_genomes_project 5 46762278 46784798 - Gm42716 processed_transcript sense_intronic MGP_NODShiLtJ_T0017987.1 MGP_NODShiLtJ_G0015461.1 mouse_genomes_project 5 46778434 46784742 - Gm42716 processed_transcript sense_intronic MGP_NODShiLtJ_T0017988.1 MGP_NODShiLtJ_G0015461.1 mouse_genomes_project 5 46784293 46786063 - Gm42716 processed_transcript retained_intron MGP_NODShiLtJ_T0072579.1 MGP_NODShiLtJ_G0029607.1 mouse_genomes_project 5 118735820 118769481 - MGP_NODShiLtJ_P0072579 Hsd17b11 protein_coding protein_coding MGP_NODShiLtJ_T0072580.1 MGP_NODShiLtJ_G0029607.1 mouse_genomes_project 5 118747624 118769400 - MGP_NODShiLtJ_P0072580 Hsd17b11 protein_coding protein_coding MGP_NODShiLtJ_T0001488.1 MGP_NODShiLtJ_G0001404.1 mouse_genomes_project 5 45861358 45863024 + TEC TEC MGP_NODShiLtJ_T0070426.1 MGP_NODShiLtJ_G0029208.1 mouse_genomes_project 5 32262087 32266555 + MGP_NODShiLtJ_P0070426 Atraid protein_coding protein_coding MGP_NODShiLtJ_T0070427.1 MGP_NODShiLtJ_G0029208.1 mouse_genomes_project 5 32262096 32270087 + Atraid protein_coding retained_intron MGP_NODShiLtJ_T0070428.1 MGP_NODShiLtJ_G0029208.1 mouse_genomes_project 5 32262410 32270093 + MGP_NODShiLtJ_P0070428 Atraid protein_coding protein_coding MGP_NODShiLtJ_T0070429.1 MGP_NODShiLtJ_G0029208.1 mouse_genomes_project 5 32262418 32270091 + MGP_NODShiLtJ_P0070429 Atraid protein_coding protein_coding MGP_NODShiLtJ_T0070430.1 MGP_NODShiLtJ_G0029208.1 mouse_genomes_project 5 32262423 32269463 + MGP_NODShiLtJ_P0070430 Atraid protein_coding protein_coding MGP_NODShiLtJ_T0070431.1 MGP_NODShiLtJ_G0029208.1 mouse_genomes_project 5 32262434 32270088 + MGP_NODShiLtJ_P0070431 Atraid protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070432.1 MGP_NODShiLtJ_G0029208.1 mouse_genomes_project 5 32262497 32269814 + MGP_NODShiLtJ_P0070432 Atraid protein_coding protein_coding MGP_NODShiLtJ_T0070433.1 MGP_NODShiLtJ_G0029208.1 mouse_genomes_project 5 32269339 32270093 + Atraid protein_coding processed_transcript MGP_NODShiLtJ_T0075168.1 MGP_NODShiLtJ_G0030096.1 mouse_genomes_project 5 159007292 159010565 - MGP_NODShiLtJ_P0075168 Psmg3 protein_coding protein_coding MGP_NODShiLtJ_T0075169.1 MGP_NODShiLtJ_G0030096.1 mouse_genomes_project 5 159007313 159010523 - MGP_NODShiLtJ_P0075169 Psmg3 protein_coding protein_coding MGP_NODShiLtJ_T0075170.1 MGP_NODShiLtJ_G0030096.1 mouse_genomes_project 5 159008167 159010555 - Psmg3 protein_coding retained_intron MGP_NODShiLtJ_T0073013.1 MGP_NODShiLtJ_G0029706.1 mouse_genomes_project 5 128460940 128463555 - Srrd protein_coding processed_transcript MGP_NODShiLtJ_T0073014.1 MGP_NODShiLtJ_G0029706.1 mouse_genomes_project 5 128460940 128466553 - MGP_NODShiLtJ_P0073014 Srrd protein_coding protein_coding MGP_NODShiLtJ_T0073015.1 MGP_NODShiLtJ_G0029706.1 mouse_genomes_project 5 128460940 128466573 - MGP_NODShiLtJ_P0073015 Srrd protein_coding protein_coding MGP_NODShiLtJ_T0073016.1 MGP_NODShiLtJ_G0029706.1 mouse_genomes_project 5 128461457 128463465 - Srrd protein_coding retained_intron MGP_NODShiLtJ_T0073017.1 MGP_NODShiLtJ_G0029706.1 mouse_genomes_project 5 128461520 128466551 - Srrd protein_coding processed_transcript MGP_NODShiLtJ_T0073018.1 MGP_NODShiLtJ_G0029706.1 mouse_genomes_project 5 128463251 128463752 - Srrd protein_coding processed_transcript MGP_NODShiLtJ_T0071252.1 MGP_NODShiLtJ_G0029338.1 mouse_genomes_project 5 48340430 48348073 - Fam184b protein_coding retained_intron MGP_NODShiLtJ_T0071253.1 MGP_NODShiLtJ_G0029338.1 mouse_genomes_project 5 48340430 48452973 - MGP_NODShiLtJ_P0071253 Fam184b protein_coding protein_coding MGP_NODShiLtJ_T0014871.1 MGP_NODShiLtJ_G0012979.1 mouse_genomes_project 5 64745370 64746064 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014926.1 MGP_NODShiLtJ_G0013034.1 mouse_genomes_project 5 87888203 87888567 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072256.1 MGP_NODShiLtJ_G0029544.1 mouse_genomes_project 5 105290859 105360627 + MGP_NODShiLtJ_P0072256 Uso1 protein_coding protein_coding MGP_NODShiLtJ_T0072257.1 MGP_NODShiLtJ_G0029544.1 mouse_genomes_project 5 105290867 105360630 + MGP_NODShiLtJ_P0072257 Uso1 protein_coding protein_coding MGP_NODShiLtJ_T0072258.1 MGP_NODShiLtJ_G0029544.1 mouse_genomes_project 5 105290868 105342156 + Uso1 protein_coding retained_intron MGP_NODShiLtJ_T0072259.1 MGP_NODShiLtJ_G0029544.1 mouse_genomes_project 5 105290887 105360628 + MGP_NODShiLtJ_P0072259 Uso1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072260.1 MGP_NODShiLtJ_G0029544.1 mouse_genomes_project 5 105339489 105360607 + Uso1 protein_coding processed_transcript MGP_NODShiLtJ_T0070760.1 MGP_NODShiLtJ_G0029257.1 mouse_genomes_project 5 35397664 35441126 - MGP_NODShiLtJ_P0070760 Letm1 protein_coding protein_coding MGP_NODShiLtJ_T0070761.1 MGP_NODShiLtJ_G0029257.1 mouse_genomes_project 5 35400525 35411710 - Letm1 protein_coding retained_intron MGP_NODShiLtJ_T0070762.1 MGP_NODShiLtJ_G0029257.1 mouse_genomes_project 5 35420031 35436957 - MGP_NODShiLtJ_P0070762 Letm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070763.1 MGP_NODShiLtJ_G0029257.1 mouse_genomes_project 5 35427677 35441023 - Letm1 protein_coding processed_transcript MGP_NODShiLtJ_T0070764.1 MGP_NODShiLtJ_G0029257.1 mouse_genomes_project 5 35427876 35428769 - Letm1 protein_coding processed_transcript MGP_NODShiLtJ_T0070765.1 MGP_NODShiLtJ_G0029257.1 mouse_genomes_project 5 35434767 35441046 - MGP_NODShiLtJ_P0070765 Letm1 protein_coding protein_coding MGP_NODShiLtJ_T0101148.1 MGP_NODShiLtJ_G0039479.1 mouse_genomes_project 5 61202816 61294277 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0073804.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140079198 140101469 + MGP_NODShiLtJ_P0073804 P2rx4 protein_coding protein_coding MGP_NODShiLtJ_T0073805.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140079223 140083329 + P2rx4 protein_coding retained_intron MGP_NODShiLtJ_T0073806.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140079224 140091219 + P2rx4 protein_coding retained_intron MGP_NODShiLtJ_T0073807.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140079234 140097093 + MGP_NODShiLtJ_P0073807 P2rx4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073808.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140079238 140100775 + MGP_NODShiLtJ_P0073808 P2rx4 protein_coding protein_coding MGP_NODShiLtJ_T0073809.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140079308 140100053 + MGP_NODShiLtJ_P0073809 P2rx4 protein_coding protein_coding MGP_NODShiLtJ_T0073810.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140079308 140100053 + MGP_NODShiLtJ_P0073810 P2rx4 protein_coding protein_coding MGP_NODShiLtJ_T0073811.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140096381 140096992 + P2rx4 protein_coding retained_intron MGP_NODShiLtJ_T0073812.1 MGP_NODShiLtJ_G0029856.1 mouse_genomes_project 5 140099393 140100315 + P2rx4 protein_coding processed_transcript MGP_NODShiLtJ_T0070193.1 MGP_NODShiLtJ_G0029162.1 mouse_genomes_project 5 26010940 26011246 - MGP_NODShiLtJ_P0070193 E130116L18Rik protein_coding protein_coding MGP_NODShiLtJ_T0097815.1 MGP_NODShiLtJ_G0036227.1 mouse_genomes_project 5 139155361 139155777 - pseudogene pseudogene MGP_NODShiLtJ_T0070407.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32159339 32164596 - MGP_NODShiLtJ_P0070407 Preb protein_coding protein_coding MGP_NODShiLtJ_T0070408.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32159443 32165963 - MGP_NODShiLtJ_P0070408 Preb protein_coding protein_coding MGP_NODShiLtJ_T0070409.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32159708 32163942 - Preb protein_coding processed_transcript MGP_NODShiLtJ_T0070410.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32159834 32160525 - Preb protein_coding retained_intron MGP_NODShiLtJ_T0070411.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32160273 32164519 - Preb protein_coding retained_intron MGP_NODShiLtJ_T0070412.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32163830 32164517 - Preb protein_coding retained_intron MGP_NODShiLtJ_T0070413.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32163978 32165081 - Preb protein_coding retained_intron MGP_NODShiLtJ_T0070414.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32164565 32166128 - Preb protein_coding processed_transcript MGP_NODShiLtJ_T0070415.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32164735 32165413 - Preb protein_coding processed_transcript MGP_NODShiLtJ_T0070416.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32164793 32166110 - Preb protein_coding retained_intron MGP_NODShiLtJ_T0070417.1 MGP_NODShiLtJ_G0029205.1 mouse_genomes_project 5 32165215 32166120 - Preb protein_coding processed_transcript MGP_NODShiLtJ_T0074167.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142884466 142954789 - MGP_NODShiLtJ_P0074167 Scarb1 protein_coding protein_coding MGP_NODShiLtJ_T0074168.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142884468 142954766 - MGP_NODShiLtJ_P0074168 Scarb1 protein_coding protein_coding MGP_NODShiLtJ_T0074169.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142884945 142902331 - MGP_NODShiLtJ_P0074169 Scarb1 protein_coding protein_coding MGP_NODShiLtJ_T0074170.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142885166 142892395 - Scarb1 protein_coding processed_transcript MGP_NODShiLtJ_T0074171.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142891185 142894909 - Scarb1 protein_coding retained_intron MGP_NODShiLtJ_T0074172.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142891590 142954714 - Scarb1 protein_coding retained_intron MGP_NODShiLtJ_T0074173.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142906882 142914106 - Scarb1 protein_coding retained_intron MGP_NODShiLtJ_T0074174.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142909923 142929004 - Scarb1 protein_coding processed_transcript MGP_NODShiLtJ_T0074175.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142912752 142953702 - MGP_NODShiLtJ_P0074175 Scarb1 protein_coding protein_coding MGP_NODShiLtJ_T0074176.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142913812 142938590 - Scarb1 protein_coding processed_transcript MGP_NODShiLtJ_T0074177.1 MGP_NODShiLtJ_G0029909.1 mouse_genomes_project 5 142937583 142940042 - Scarb1 protein_coding retained_intron MGP_NODShiLtJ_T0014969.1 MGP_NODShiLtJ_G0013077.1 mouse_genomes_project 5 114244199 114244657 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070986.1 MGP_NODShiLtJ_G0029289.1 mouse_genomes_project 5 37735715 37855759 + MGP_NODShiLtJ_P0070986 Afap1 protein_coding protein_coding MGP_NODShiLtJ_T0070987.1 MGP_NODShiLtJ_G0029289.1 mouse_genomes_project 5 37735818 37849791 + MGP_NODShiLtJ_P0070987 Afap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070988.1 MGP_NODShiLtJ_G0029289.1 mouse_genomes_project 5 37735861 37749631 + Afap1 protein_coding processed_transcript MGP_NODShiLtJ_T0070989.1 MGP_NODShiLtJ_G0029289.1 mouse_genomes_project 5 37757022 37846090 + MGP_NODShiLtJ_P0070989 Afap1 protein_coding protein_coding MGP_NODShiLtJ_T0070990.1 MGP_NODShiLtJ_G0029289.1 mouse_genomes_project 5 37835660 37839882 + Afap1 protein_coding retained_intron MGP_NODShiLtJ_T0075390.1 MGP_NODShiLtJ_G0030145.1 mouse_genomes_project 5 163435343 163448736 + Rsph10b protein_coding processed_transcript MGP_NODShiLtJ_T0075391.1 MGP_NODShiLtJ_G0030145.1 mouse_genomes_project 5 163435370 163492696 + MGP_NODShiLtJ_P0075391 Rsph10b protein_coding protein_coding MGP_NODShiLtJ_T0075392.1 MGP_NODShiLtJ_G0030145.1 mouse_genomes_project 5 163436369 163492700 + MGP_NODShiLtJ_P0075392 Rsph10b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0075393.1 MGP_NODShiLtJ_G0030145.1 mouse_genomes_project 5 163439391 163448733 + MGP_NODShiLtJ_P0075393 Rsph10b protein_coding protein_coding MGP_NODShiLtJ_T0075394.1 MGP_NODShiLtJ_G0030145.1 mouse_genomes_project 5 163486481 163492505 + Rsph10b protein_coding processed_transcript MGP_NODShiLtJ_T0100636.1 MGP_NODShiLtJ_G0039030.1 mouse_genomes_project 5 123213231 123213363 + Gm22270 snoRNA snoRNA MGP_NODShiLtJ_T0098426.1 MGP_NODShiLtJ_G0036827.1 mouse_genomes_project 5 171104630 171108680 + Gm42531 sense_intronic sense_intronic MGP_NODShiLtJ_T0014763.1 MGP_NODShiLtJ_G0012871.1 mouse_genomes_project 5 21729701 21730057 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004601.1 MGP_NODShiLtJ_G0003982.1 mouse_genomes_project 5 33344459 33349346 - Gm17130 antisense antisense MGP_NODShiLtJ_T0010588.1 MGP_NODShiLtJ_G0008721.1 mouse_genomes_project 5 94606704 94606787 + Gm44303 miRNA miRNA MGP_NODShiLtJ_T0014861.1 MGP_NODShiLtJ_G0012969.1 mouse_genomes_project 5 59146158 59146987 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072541.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117564357 117877563 - MGP_NODShiLtJ_P0072541 Mapk10 protein_coding protein_coding MGP_NODShiLtJ_T0072542.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117564359 117877563 - MGP_NODShiLtJ_P0072542 Mapk10 protein_coding protein_coding MGP_NODShiLtJ_T0072543.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117564359 117722089 - MGP_NODShiLtJ_P0072543 Mapk10 protein_coding protein_coding MGP_NODShiLtJ_T0072544.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117564359 117764512 - MGP_NODShiLtJ_P0072544 Mapk10 protein_coding protein_coding MGP_NODShiLtJ_T0072545.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117569547 117872159 - MGP_NODShiLtJ_P0072545 Mapk10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072546.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117576696 117877502 - MGP_NODShiLtJ_P0072546 Mapk10 protein_coding protein_coding MGP_NODShiLtJ_T0072547.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117647526 117687468 - MGP_NODShiLtJ_P0072547 Mapk10 protein_coding protein_coding MGP_NODShiLtJ_T0072548.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117647836 117877563 - MGP_NODShiLtJ_P0072548 Mapk10 protein_coding protein_coding MGP_NODShiLtJ_T0072549.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117822414 117877513 - Mapk10 protein_coding processed_transcript MGP_NODShiLtJ_T0072550.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117872052 117875242 - Mapk10 protein_coding processed_transcript MGP_NODShiLtJ_T0072551.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117872056 117877563 - Mapk10 protein_coding processed_transcript MGP_NODShiLtJ_T0072552.1 MGP_NODShiLtJ_G0029600.1 mouse_genomes_project 5 117875180 117877100 - Mapk10 protein_coding processed_transcript MGP_NODShiLtJ_T0070893.1 MGP_NODShiLtJ_G0029275.1 mouse_genomes_project 5 36539657 36602738 + Htt protein_coding retained_intron MGP_NODShiLtJ_T0070894.1 MGP_NODShiLtJ_G0029275.1 mouse_genomes_project 5 36539661 36707928 + MGP_NODShiLtJ_P0070894 Htt protein_coding protein_coding MGP_NODShiLtJ_T0070895.1 MGP_NODShiLtJ_G0029275.1 mouse_genomes_project 5 36539678 36595402 + Htt protein_coding retained_intron MGP_NODShiLtJ_T0070896.1 MGP_NODShiLtJ_G0029275.1 mouse_genomes_project 5 36576272 36578925 + Htt protein_coding retained_intron MGP_NODShiLtJ_T0070897.1 MGP_NODShiLtJ_G0029275.1 mouse_genomes_project 5 36587073 36592112 + Htt protein_coding retained_intron MGP_NODShiLtJ_T0070898.1 MGP_NODShiLtJ_G0029275.1 mouse_genomes_project 5 36590344 36592598 + Htt protein_coding retained_intron MGP_NODShiLtJ_T0070899.1 MGP_NODShiLtJ_G0029275.1 mouse_genomes_project 5 36670839 36679408 + Htt protein_coding retained_intron MGP_NODShiLtJ_T0070900.1 MGP_NODShiLtJ_G0029275.1 mouse_genomes_project 5 36680879 36698137 + Htt protein_coding retained_intron MGP_NODShiLtJ_T0071322.1 MGP_NODShiLtJ_G0029347.1 mouse_genomes_project 5 56208625 56217042 + MGP_NODShiLtJ_P0071322 Sod3 protein_coding protein_coding MGP_NODShiLtJ_T0001486.1 MGP_NODShiLtJ_G0001402.1 mouse_genomes_project 5 43740476 43742141 + TEC TEC MGP_NODShiLtJ_T0004640.1 MGP_NODShiLtJ_G0004013.1 mouse_genomes_project 5 57480747 57484217 - Gm10441 antisense antisense MGP_NODShiLtJ_T0074275.1 MGP_NODShiLtJ_G0029931.1 mouse_genomes_project 5 147724115 147761157 + MGP_NODShiLtJ_P0074275 Gbas protein_coding protein_coding MGP_NODShiLtJ_T0074276.1 MGP_NODShiLtJ_G0029931.1 mouse_genomes_project 5 147724151 147761080 + MGP_NODShiLtJ_P0074276 Gbas protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074277.1 MGP_NODShiLtJ_G0029931.1 mouse_genomes_project 5 147724153 147760203 + MGP_NODShiLtJ_P0074277 Gbas protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074278.1 MGP_NODShiLtJ_G0029931.1 mouse_genomes_project 5 147753959 147760032 + Gbas protein_coding retained_intron MGP_NODShiLtJ_T0074279.1 MGP_NODShiLtJ_G0029931.1 mouse_genomes_project 5 147754531 147756166 + Gbas protein_coding processed_transcript MGP_NODShiLtJ_T0015079.1 MGP_NODShiLtJ_G0013187.1 mouse_genomes_project 5 164943676 164944175 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004817.1 MGP_NODShiLtJ_G0004139.1 mouse_genomes_project 5 159284358 159296632 + Gm16122 antisense antisense MGP_NODShiLtJ_T0098404.1 MGP_NODShiLtJ_G0036809.1 mouse_genomes_project 5 113882650 113883389 - Gm16227 sense_intronic sense_intronic MGP_NODShiLtJ_T0001825.1 MGP_NODShiLtJ_G0001738.1 mouse_genomes_project 5 150543553 150545861 - TEC TEC MGP_NODShiLtJ_T0014859.1 MGP_NODShiLtJ_G0012967.1 mouse_genomes_project 5 58110878 58111956 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011713.1 MGP_NODShiLtJ_G0009830.1 mouse_genomes_project 5 80892277 80993683 + MGP_NODShiLtJ_P0011713 Atp10d polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011714.1 MGP_NODShiLtJ_G0009830.1 mouse_genomes_project 5 80892277 80920760 + MGP_NODShiLtJ_P0011714 Atp10d polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0011715.1 MGP_NODShiLtJ_G0009830.1 mouse_genomes_project 5 80892301 80919897 + Atp10d polymorphic_pseudogene retained_intron MGP_NODShiLtJ_T0011716.1 MGP_NODShiLtJ_G0009830.1 mouse_genomes_project 5 80959660 80993683 + Atp10d polymorphic_pseudogene processed_transcript MGP_NODShiLtJ_T0011717.1 MGP_NODShiLtJ_G0009830.1 mouse_genomes_project 5 80975909 80993669 + MGP_NODShiLtJ_P0011717 Atp10d polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0011718.1 MGP_NODShiLtJ_G0009830.1 mouse_genomes_project 5 80975909 80993670 + Atp10d polymorphic_pseudogene processed_transcript MGP_NODShiLtJ_T0001541.1 MGP_NODShiLtJ_G0001457.1 mouse_genomes_project 5 52581059 52582723 - TEC TEC MGP_NODShiLtJ_T0014876.1 MGP_NODShiLtJ_G0012984.1 mouse_genomes_project 5 66123542 66123736 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014815.1 MGP_NODShiLtJ_G0012923.1 mouse_genomes_project 5 33686416 33686605 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015049.1 MGP_NODShiLtJ_G0013157.1 mouse_genomes_project 5 155879185 155888980 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072558.1 MGP_NODShiLtJ_G0029602.1 mouse_genomes_project 5 118307747 118331967 - MGP_NODShiLtJ_P0072558 Slc10a6 protein_coding protein_coding MGP_NODShiLtJ_T0074939.1 MGP_NODShiLtJ_G0030049.1 mouse_genomes_project 5 156647842 156648946 - Pilrb2 protein_coding retained_intron MGP_NODShiLtJ_T0074942.1 MGP_NODShiLtJ_G0030049.1 mouse_genomes_project 5 156647842 156661324 - MGP_NODShiLtJ_P0074942 Pilrb2 protein_coding protein_coding MGP_NODShiLtJ_T0074943.1 MGP_NODShiLtJ_G0030049.1 mouse_genomes_project 5 156647842 156650646 - MGP_NODShiLtJ_P0074943 Pilrb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074944.1 MGP_NODShiLtJ_G0030049.1 mouse_genomes_project 5 156647842 156658013 - MGP_NODShiLtJ_P0074944 Pilrb2 protein_coding protein_coding MGP_NODShiLtJ_T0074946.1 MGP_NODShiLtJ_G0030049.1 mouse_genomes_project 5 156647844 156661375 - MGP_NODShiLtJ_P0074946 Pilrb2 protein_coding protein_coding MGP_NODShiLtJ_T0074950.1 MGP_NODShiLtJ_G0030049.1 mouse_genomes_project 5 156658086 156661432 - MGP_NODShiLtJ_P0074950 Pilrb2 protein_coding protein_coding MGP_NODShiLtJ_T0001601.1 MGP_NODShiLtJ_G0001516.1 mouse_genomes_project 5 73117082 73120033 - TEC TEC MGP_NODShiLtJ_T0074192.1 MGP_NODShiLtJ_G0029915.1 mouse_genomes_project 5 143173033 143268789 + MGP_NODShiLtJ_P0074192 Tmem132b protein_coding protein_coding MGP_NODShiLtJ_T0074193.1 MGP_NODShiLtJ_G0029915.1 mouse_genomes_project 5 143173645 143436350 + MGP_NODShiLtJ_P0074193 Tmem132b protein_coding protein_coding MGP_NODShiLtJ_T0074194.1 MGP_NODShiLtJ_G0029915.1 mouse_genomes_project 5 143268496 143348268 + Tmem132b protein_coding retained_intron MGP_NODShiLtJ_T0072304.1 MGP_NODShiLtJ_G0029552.1 mouse_genomes_project 5 105604222 105627479 - MGP_NODShiLtJ_P0072304 Nup54 protein_coding protein_coding MGP_NODShiLtJ_T0072305.1 MGP_NODShiLtJ_G0029552.1 mouse_genomes_project 5 105604891 105606655 - Nup54 protein_coding retained_intron MGP_NODShiLtJ_T0072306.1 MGP_NODShiLtJ_G0029552.1 mouse_genomes_project 5 105613469 105615424 - Nup54 protein_coding retained_intron MGP_NODShiLtJ_T0072307.1 MGP_NODShiLtJ_G0029552.1 mouse_genomes_project 5 105616242 105626806 - Nup54 protein_coding processed_transcript MGP_NODShiLtJ_T0072308.1 MGP_NODShiLtJ_G0029552.1 mouse_genomes_project 5 105620261 105627351 - Nup54 protein_coding retained_intron MGP_NODShiLtJ_T0072309.1 MGP_NODShiLtJ_G0029552.1 mouse_genomes_project 5 105620532 105627374 - MGP_NODShiLtJ_P0072309 Nup54 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072310.1 MGP_NODShiLtJ_G0029552.1 mouse_genomes_project 5 105623134 105627383 - MGP_NODShiLtJ_P0072310 Nup54 protein_coding protein_coding MGP_NODShiLtJ_T0072311.1 MGP_NODShiLtJ_G0029552.1 mouse_genomes_project 5 105623142 105627017 - MGP_NODShiLtJ_P0072311 Nup54 protein_coding protein_coding MGP_NODShiLtJ_T0010594.1 MGP_NODShiLtJ_G0008727.1 mouse_genomes_project 5 114995152 114995228 - Gm23222 miRNA miRNA MGP_NODShiLtJ_T0070274.1 MGP_NODShiLtJ_G0029180.1 mouse_genomes_project 5 30881571 30881871 - MGP_NODShiLtJ_P0070274 Gm5129 protein_coding protein_coding MGP_NODShiLtJ_T0004762.1 MGP_NODShiLtJ_G0004101.1 mouse_genomes_project 5 139373429 139382406 + Gm15637 antisense antisense MGP_NODShiLtJ_T0004828.1 MGP_NODShiLtJ_G0004147.1 mouse_genomes_project 5 163776966 163781836 - 2900089D17Rik antisense antisense MGP_NODShiLtJ_T0004829.1 MGP_NODShiLtJ_G0004147.1 mouse_genomes_project 5 163777053 163791500 - 2900089D17Rik antisense antisense MGP_NODShiLtJ_T0008117.1 MGP_NODShiLtJ_G0006609.1 mouse_genomes_project 5 86634655 86643289 + Gm42761 lincRNA lincRNA MGP_NODShiLtJ_T0001428.1 MGP_NODShiLtJ_G0001347.1 mouse_genomes_project 5 14115543 14119571 + TEC TEC MGP_NODShiLtJ_T0014749.1 MGP_NODShiLtJ_G0012857.1 mouse_genomes_project 5 15817252 15818036 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001788.1 MGP_NODShiLtJ_G0001701.1 mouse_genomes_project 5 143101944 143106118 + TEC TEC MGP_NODShiLtJ_T0074037.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141677908 141782469 - MGP_NODShiLtJ_P0074037 Pitpnm2 protein_coding protein_coding MGP_NODShiLtJ_T0074038.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141677908 141816760 - MGP_NODShiLtJ_P0074038 Pitpnm2 protein_coding protein_coding MGP_NODShiLtJ_T0074039.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141677909 141815504 - MGP_NODShiLtJ_P0074039 Pitpnm2 protein_coding protein_coding MGP_NODShiLtJ_T0074040.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141678965 141749695 - MGP_NODShiLtJ_P0074040 Pitpnm2 protein_coding protein_coding MGP_NODShiLtJ_T0074041.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141679512 141683768 - Pitpnm2 protein_coding retained_intron MGP_NODShiLtJ_T0074042.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141680297 141681323 - Pitpnm2 protein_coding retained_intron MGP_NODShiLtJ_T0074043.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141684430 141685846 - Pitpnm2 protein_coding retained_intron MGP_NODShiLtJ_T0074044.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141692017 141752259 - MGP_NODShiLtJ_P0074044 Pitpnm2 protein_coding protein_coding MGP_NODShiLtJ_T0074045.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141692190 141699474 - Pitpnm2 protein_coding retained_intron MGP_NODShiLtJ_T0074046.1 MGP_NODShiLtJ_G0029890.1 mouse_genomes_project 5 141702814 141747631 - MGP_NODShiLtJ_P0074046 Pitpnm2 protein_coding protein_coding MGP_NODShiLtJ_T0014772.1 MGP_NODShiLtJ_G0012880.1 mouse_genomes_project 5 23092884 23093180 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014873.1 MGP_NODShiLtJ_G0012981.1 mouse_genomes_project 5 65406786 65407165 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004823.1 MGP_NODShiLtJ_G0004144.1 mouse_genomes_project 5 162834396 162837854 + 0610040B10Rik antisense antisense MGP_NODShiLtJ_T0004824.1 MGP_NODShiLtJ_G0004144.1 mouse_genomes_project 5 162834457 162836100 + 0610040B10Rik antisense antisense MGP_NODShiLtJ_T0004825.1 MGP_NODShiLtJ_G0004144.1 mouse_genomes_project 5 162834476 162837851 + 0610040B10Rik antisense antisense MGP_NODShiLtJ_T0072439.1 MGP_NODShiLtJ_G0029582.1 mouse_genomes_project 5 114399730 114400333 + MGP_NODShiLtJ_P0072439 4930524J08Rik protein_coding protein_coding MGP_NODShiLtJ_T0099370.1 MGP_NODShiLtJ_G0037764.1 mouse_genomes_project 5 98410361 98410468 - Gm25473 snRNA snRNA MGP_NODShiLtJ_T0072477.1 MGP_NODShiLtJ_G0029588.1 mouse_genomes_project 5 115015626 115046364 + MGP_NODShiLtJ_P0072477 Cops4 protein_coding protein_coding MGP_NODShiLtJ_T0072478.1 MGP_NODShiLtJ_G0029588.1 mouse_genomes_project 5 115015760 115029669 + Cops4 protein_coding retained_intron MGP_NODShiLtJ_T0072479.1 MGP_NODShiLtJ_G0029588.1 mouse_genomes_project 5 115015774 115035042 + MGP_NODShiLtJ_P0072479 Cops4 protein_coding protein_coding MGP_NODShiLtJ_T0072480.1 MGP_NODShiLtJ_G0029588.1 mouse_genomes_project 5 115015789 115030965 + MGP_NODShiLtJ_P0072480 Cops4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072481.1 MGP_NODShiLtJ_G0029588.1 mouse_genomes_project 5 115016054 115034928 + MGP_NODShiLtJ_P0072481 Cops4 protein_coding protein_coding MGP_NODShiLtJ_T0072482.1 MGP_NODShiLtJ_G0029588.1 mouse_genomes_project 5 115026213 115042483 + MGP_NODShiLtJ_P0072482 Cops4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072483.1 MGP_NODShiLtJ_G0029588.1 mouse_genomes_project 5 115029815 115046341 + Cops4 protein_coding retained_intron MGP_NODShiLtJ_T0098042.1 MGP_NODShiLtJ_G0036454.1 mouse_genomes_project 5 24320572 24320665 - Gm24009 rRNA rRNA MGP_NODShiLtJ_T0014795.1 MGP_NODShiLtJ_G0012903.1 mouse_genomes_project 5 27262883 27264696 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099356.1 MGP_NODShiLtJ_G0037750.1 mouse_genomes_project 5 77387733 77387840 - Gm23932 snRNA snRNA MGP_NODShiLtJ_T0014985.1 MGP_NODShiLtJ_G0013093.1 mouse_genomes_project 5 121553717 121554040 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072962.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126786885 126813348 - MGP_NODShiLtJ_P0072962 Ulk1 protein_coding protein_coding MGP_NODShiLtJ_T0072963.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126789282 126791228 - MGP_NODShiLtJ_P0072963 Ulk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072964.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126789304 126792336 - MGP_NODShiLtJ_P0072964 Ulk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072965.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126789321 126790504 - Ulk1 protein_coding retained_intron MGP_NODShiLtJ_T0072966.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126789376 126813304 - MGP_NODShiLtJ_P0072966 Ulk1 protein_coding protein_coding MGP_NODShiLtJ_T0072967.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126791173 126791950 - Ulk1 protein_coding retained_intron MGP_NODShiLtJ_T0072968.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126791539 126792749 - Ulk1 protein_coding retained_intron MGP_NODShiLtJ_T0072969.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126794682 126795477 - Ulk1 protein_coding retained_intron MGP_NODShiLtJ_T0072970.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126794957 126796691 - Ulk1 protein_coding retained_intron MGP_NODShiLtJ_T0072971.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126795680 126799082 - Ulk1 protein_coding processed_transcript MGP_NODShiLtJ_T0072972.1 MGP_NODShiLtJ_G0029695.1 mouse_genomes_project 5 126796886 126799119 - Ulk1 protein_coding retained_intron MGP_NODShiLtJ_T0015092.1 MGP_NODShiLtJ_G0013200.1 mouse_genomes_project 5 167563228 167563688 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073720.1 MGP_NODShiLtJ_G0029842.1 mouse_genomes_project 5 139441385 139475838 - MGP_NODShiLtJ_P0073720 Ccdc63 protein_coding protein_coding MGP_NODShiLtJ_T0073721.1 MGP_NODShiLtJ_G0029842.1 mouse_genomes_project 5 139441415 139444396 - Ccdc63 protein_coding retained_intron MGP_NODShiLtJ_T0073722.1 MGP_NODShiLtJ_G0029842.1 mouse_genomes_project 5 139441430 139472598 - MGP_NODShiLtJ_P0073722 Ccdc63 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073723.1 MGP_NODShiLtJ_G0029842.1 mouse_genomes_project 5 139461541 139468967 - MGP_NODShiLtJ_P0073723 Ccdc63 protein_coding protein_coding MGP_NODShiLtJ_T0073724.1 MGP_NODShiLtJ_G0029842.1 mouse_genomes_project 5 139466861 139468967 - MGP_NODShiLtJ_P0073724 Ccdc63 protein_coding protein_coding MGP_NODShiLtJ_T0073725.1 MGP_NODShiLtJ_G0029842.1 mouse_genomes_project 5 139472219 139476733 - Ccdc63 protein_coding retained_intron MGP_NODShiLtJ_T0073726.1 MGP_NODShiLtJ_G0029842.1 mouse_genomes_project 5 139473894 139478480 - Ccdc63 protein_coding retained_intron MGP_NODShiLtJ_T0099347.1 MGP_NODShiLtJ_G0037741.1 mouse_genomes_project 5 38533120 38533224 - Gm24878 snRNA snRNA MGP_NODShiLtJ_T0008209.1 MGP_NODShiLtJ_G0006675.1 mouse_genomes_project 5 126782268 126783518 + Gm26515 lincRNA lincRNA MGP_NODShiLtJ_T0100604.1 MGP_NODShiLtJ_G0038998.1 mouse_genomes_project 5 24346731 24346798 - Snord93 snoRNA snoRNA MGP_NODShiLtJ_T0015082.1 MGP_NODShiLtJ_G0013190.1 mouse_genomes_project 5 165507803 165507968 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069623.1 MGP_NODShiLtJ_G0029061.1 mouse_genomes_project 5 360615 373120 - MGP_NODShiLtJ_P0069623 Rbm48 protein_coding protein_coding MGP_NODShiLtJ_T0069624.1 MGP_NODShiLtJ_G0029061.1 mouse_genomes_project 5 361358 369256 - MGP_NODShiLtJ_P0069624 Rbm48 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069625.1 MGP_NODShiLtJ_G0029061.1 mouse_genomes_project 5 361413 372594 - MGP_NODShiLtJ_P0069625 Rbm48 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069626.1 MGP_NODShiLtJ_G0029061.1 mouse_genomes_project 5 367295 368669 - Rbm48 protein_coding retained_intron MGP_NODShiLtJ_T0069627.1 MGP_NODShiLtJ_G0029061.1 mouse_genomes_project 5 368009 372617 - Rbm48 protein_coding retained_intron MGP_NODShiLtJ_T0069628.1 MGP_NODShiLtJ_G0029061.1 mouse_genomes_project 5 368783 372737 - MGP_NODShiLtJ_P0069628 Rbm48 protein_coding protein_coding MGP_NODShiLtJ_T0098390.1 MGP_NODShiLtJ_G0036795.1 mouse_genomes_project 5 1874719 1876439 - Gm43113 sense_intronic sense_intronic MGP_NODShiLtJ_T0004617.1 MGP_NODShiLtJ_G0003998.1 mouse_genomes_project 5 40764580 40781304 + Clnkos antisense antisense MGP_NODShiLtJ_T0004618.1 MGP_NODShiLtJ_G0003998.1 mouse_genomes_project 5 40764581 40781304 + Clnkos antisense antisense MGP_NODShiLtJ_T0014867.1 MGP_NODShiLtJ_G0012975.1 mouse_genomes_project 5 62377262 62377998 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015005.1 MGP_NODShiLtJ_G0013113.1 mouse_genomes_project 5 125506225 125506598 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072700.1 MGP_NODShiLtJ_G0029639.1 mouse_genomes_project 5 122714316 122787014 + MGP_NODShiLtJ_P0072700 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072701.1 MGP_NODShiLtJ_G0029639.1 mouse_genomes_project 5 122714348 122767868 + MGP_NODShiLtJ_P0072701 protein_coding protein_coding MGP_NODShiLtJ_T0072702.1 MGP_NODShiLtJ_G0029639.1 mouse_genomes_project 5 122729635 122748209 + protein_coding processed_transcript MGP_NODShiLtJ_T0099331.1 MGP_NODShiLtJ_G0037725.1 mouse_genomes_project 5 4621794 4621945 - Gm24525 snRNA snRNA MGP_NODShiLtJ_T0070400.1 MGP_NODShiLtJ_G0029203.1 mouse_genomes_project 5 32124593 32134446 + MGP_NODShiLtJ_P0070400 Khk protein_coding protein_coding MGP_NODShiLtJ_T0070401.1 MGP_NODShiLtJ_G0029203.1 mouse_genomes_project 5 32124785 32134244 + MGP_NODShiLtJ_P0070401 Khk protein_coding protein_coding MGP_NODShiLtJ_T0070402.1 MGP_NODShiLtJ_G0029203.1 mouse_genomes_project 5 32125028 32134387 + MGP_NODShiLtJ_P0070402 Khk protein_coding protein_coding MGP_NODShiLtJ_T0070403.1 MGP_NODShiLtJ_G0029203.1 mouse_genomes_project 5 32125053 32133991 + MGP_NODShiLtJ_P0070403 Khk protein_coding protein_coding MGP_NODShiLtJ_T0070404.1 MGP_NODShiLtJ_G0029203.1 mouse_genomes_project 5 32133811 32134443 + Khk protein_coding retained_intron MGP_NODShiLtJ_T0018056.1 MGP_NODShiLtJ_G0015483.1 mouse_genomes_project 5 169353735 169374643 - Gm15411 processed_transcript lincRNA MGP_NODShiLtJ_T0018057.1 MGP_NODShiLtJ_G0015483.1 mouse_genomes_project 5 169357167 169374614 - Gm15411 processed_transcript lincRNA MGP_NODShiLtJ_T0018058.1 MGP_NODShiLtJ_G0015483.1 mouse_genomes_project 5 169372626 169374643 - Gm15411 processed_transcript retained_intron MGP_NODShiLtJ_T0074596.1 MGP_NODShiLtJ_G0029987.1 mouse_genomes_project 5 154019440 154022553 - MGP_NODShiLtJ_P0074596 Ccl24 protein_coding protein_coding MGP_NODShiLtJ_T0074597.1 MGP_NODShiLtJ_G0029987.1 mouse_genomes_project 5 154020083 154022553 - MGP_NODShiLtJ_P0074597 Ccl24 protein_coding protein_coding MGP_NODShiLtJ_T0073840.1 MGP_NODShiLtJ_G0029859.1 mouse_genomes_project 5 140230449 140254274 + MGP_NODShiLtJ_P0073840 Rnf34 protein_coding protein_coding MGP_NODShiLtJ_T0073841.1 MGP_NODShiLtJ_G0029859.1 mouse_genomes_project 5 140230558 140245357 + MGP_NODShiLtJ_P0073841 Rnf34 protein_coding protein_coding MGP_NODShiLtJ_T0074959.1 MGP_NODShiLtJ_G0030056.1 mouse_genomes_project 5 156928861 156952553 + MGP_NODShiLtJ_P0074959 Zkscan1 protein_coding protein_coding MGP_NODShiLtJ_T0074960.1 MGP_NODShiLtJ_G0030056.1 mouse_genomes_project 5 156928861 156952553 + MGP_NODShiLtJ_P0074960 Zkscan1 protein_coding protein_coding MGP_NODShiLtJ_T0074961.1 MGP_NODShiLtJ_G0030056.1 mouse_genomes_project 5 156928897 156949229 + MGP_NODShiLtJ_P0074961 Zkscan1 protein_coding protein_coding MGP_NODShiLtJ_T0074962.1 MGP_NODShiLtJ_G0030056.1 mouse_genomes_project 5 156937341 156949228 + MGP_NODShiLtJ_P0074962 Zkscan1 protein_coding protein_coding MGP_NODShiLtJ_T0008334.1 MGP_NODShiLtJ_G0006751.1 mouse_genomes_project 5 150731793 150732952 + Gm28616 lincRNA lincRNA MGP_NODShiLtJ_T0070339.1 MGP_NODShiLtJ_G0029193.1 mouse_genomes_project 5 31659033 31719133 - MGP_NODShiLtJ_P0070339 protein_coding protein_coding MGP_NODShiLtJ_T0008073.1 MGP_NODShiLtJ_G0006574.1 mouse_genomes_project 5 67381358 67386069 - 1700014F14Rik lincRNA lincRNA MGP_NODShiLtJ_T0074179.1 MGP_NODShiLtJ_G0029911.1 mouse_genomes_project 5 143011135 143012370 + MGP_NODShiLtJ_P0074179 Gm10382 protein_coding protein_coding MGP_NODShiLtJ_T0070523.1 MGP_NODShiLtJ_G0029221.1 mouse_genomes_project 5 32482015 32482573 - MGP_NODShiLtJ_P0070523 Gm9970 protein_coding protein_coding MGP_NODShiLtJ_T0008388.1 MGP_NODShiLtJ_G0006796.1 mouse_genomes_project 5 169576013 169577057 + Gm43332 lincRNA lincRNA MGP_NODShiLtJ_T0072279.1 MGP_NODShiLtJ_G0029549.1 mouse_genomes_project 5 105494357 105510205 - MGP_NODShiLtJ_P0072279 Cxcl9 protein_coding protein_coding MGP_NODShiLtJ_T0072280.1 MGP_NODShiLtJ_G0029549.1 mouse_genomes_project 5 105508748 105510204 - Cxcl9 protein_coding retained_intron MGP_NODShiLtJ_T0001746.1 MGP_NODShiLtJ_G0001660.1 mouse_genomes_project 5 134795548 134796471 - TEC TEC MGP_NODShiLtJ_T0008203.1 MGP_NODShiLtJ_G0006673.1 mouse_genomes_project 5 126504516 126514905 + A630023P12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008204.1 MGP_NODShiLtJ_G0006673.1 mouse_genomes_project 5 126504537 126505116 + A630023P12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008205.1 MGP_NODShiLtJ_G0006673.1 mouse_genomes_project 5 126510511 126514059 + A630023P12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008206.1 MGP_NODShiLtJ_G0006673.1 mouse_genomes_project 5 126510547 126511426 + A630023P12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008207.1 MGP_NODShiLtJ_G0006673.1 mouse_genomes_project 5 126510578 126514913 + A630023P12Rik lincRNA lincRNA MGP_NODShiLtJ_T0072410.1 MGP_NODShiLtJ_G0029577.1 mouse_genomes_project 5 113167874 113188040 + MGP_NODShiLtJ_P0072410 Bmp3 protein_coding protein_coding MGP_NODShiLtJ_T0072411.1 MGP_NODShiLtJ_G0029577.1 mouse_genomes_project 5 113167898 113200073 + MGP_NODShiLtJ_P0072411 Bmp3 protein_coding protein_coding MGP_NODShiLtJ_T0072412.1 MGP_NODShiLtJ_G0029577.1 mouse_genomes_project 5 113167910 113200073 + MGP_NODShiLtJ_P0072412 Bmp3 protein_coding protein_coding MGP_NODShiLtJ_T0098408.1 MGP_NODShiLtJ_G0036813.1 mouse_genomes_project 5 131993458 131994143 + Gm13840 sense_intronic sense_intronic MGP_NODShiLtJ_T0010627.1 MGP_NODShiLtJ_G0008760.1 mouse_genomes_project 5 157015574 157015656 - Mir106b miRNA miRNA MGP_NODShiLtJ_T0001713.1 MGP_NODShiLtJ_G0001627.1 mouse_genomes_project 5 123970757 123974039 - TEC TEC MGP_NODShiLtJ_T0070642.1 MGP_NODShiLtJ_G0029237.1 mouse_genomes_project 5 33839316 33878269 + MGP_NODShiLtJ_P0070642 Ppp1cb protein_coding protein_coding MGP_NODShiLtJ_T0070643.1 MGP_NODShiLtJ_G0029237.1 mouse_genomes_project 5 33839625 33907015 + MGP_NODShiLtJ_P0070643 Ppp1cb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070644.1 MGP_NODShiLtJ_G0029237.1 mouse_genomes_project 5 33839659 33846269 + Ppp1cb protein_coding retained_intron MGP_NODShiLtJ_T0070645.1 MGP_NODShiLtJ_G0029237.1 mouse_genomes_project 5 33839695 33873785 + MGP_NODShiLtJ_P0070645 Ppp1cb protein_coding protein_coding MGP_NODShiLtJ_T0070646.1 MGP_NODShiLtJ_G0029237.1 mouse_genomes_project 5 33860095 33868058 + Ppp1cb protein_coding processed_transcript MGP_NODShiLtJ_T0070647.1 MGP_NODShiLtJ_G0029237.1 mouse_genomes_project 5 33868715 33875502 + MGP_NODShiLtJ_P0070647 Ppp1cb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001559.1 MGP_NODShiLtJ_G0001475.1 mouse_genomes_project 5 55977883 55982020 - TEC TEC MGP_NODShiLtJ_T0001543.1 MGP_NODShiLtJ_G0001459.1 mouse_genomes_project 5 52698937 52699325 - TEC TEC MGP_NODShiLtJ_T0001804.1 MGP_NODShiLtJ_G0001717.1 mouse_genomes_project 5 148698850 148699278 - TEC TEC MGP_NODShiLtJ_T0075512.1 MGP_NODShiLtJ_G0030169.1 mouse_genomes_project 5 165049119 165098421 + MGP_NODShiLtJ_P0075512 Cyp3a57 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075513.1 MGP_NODShiLtJ_G0030169.1 mouse_genomes_project 5 165049127 165098835 + MGP_NODShiLtJ_P0075513 Cyp3a57 protein_coding protein_coding MGP_NODShiLtJ_T0071827.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83447250 83513873 + MGP_NODShiLtJ_P0071827 Fip1l1 protein_coding protein_coding MGP_NODShiLtJ_T0071828.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83447272 83513883 + MGP_NODShiLtJ_P0071828 Fip1l1 protein_coding protein_coding MGP_NODShiLtJ_T0071829.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83447280 83507513 + MGP_NODShiLtJ_P0071829 Fip1l1 protein_coding protein_coding MGP_NODShiLtJ_T0071830.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83447282 83511228 + MGP_NODShiLtJ_P0071830 Fip1l1 protein_coding protein_coding MGP_NODShiLtJ_T0071831.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83447285 83452368 + Fip1l1 protein_coding retained_intron MGP_NODShiLtJ_T0071832.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83447304 83506895 + MGP_NODShiLtJ_P0071832 Fip1l1 protein_coding protein_coding MGP_NODShiLtJ_T0071833.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83447485 83500514 + Fip1l1 protein_coding retained_intron MGP_NODShiLtJ_T0071834.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83447780 83457253 + Fip1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0071835.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83499819 83506995 + Fip1l1 protein_coding retained_intron MGP_NODShiLtJ_T0071836.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83499864 83503306 + Fip1l1 protein_coding retained_intron MGP_NODShiLtJ_T0071837.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83501211 83503501 + Fip1l1 protein_coding retained_intron MGP_NODShiLtJ_T0071838.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83501885 83507085 + Fip1l1 protein_coding retained_intron MGP_NODShiLtJ_T0071843.1 MGP_NODShiLtJ_G0029435.1 mouse_genomes_project 5 83509802 83511013 + Fip1l1 protein_coding retained_intron MGP_NODShiLtJ_T0014755.1 MGP_NODShiLtJ_G0012863.1 mouse_genomes_project 5 19305364 19305605 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014914.1 MGP_NODShiLtJ_G0013022.1 mouse_genomes_project 5 84093139 84093362 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072105.1 MGP_NODShiLtJ_G0029496.1 mouse_genomes_project 5 100511833 100530094 + MGP_NODShiLtJ_P0072105 Odam protein_coding protein_coding MGP_NODShiLtJ_T0072106.1 MGP_NODShiLtJ_G0029496.1 mouse_genomes_project 5 100512499 100528454 + MGP_NODShiLtJ_P0072106 Odam protein_coding protein_coding MGP_NODShiLtJ_T0099355.1 MGP_NODShiLtJ_G0037749.1 mouse_genomes_project 5 73649302 73649409 - Gm22929 snRNA snRNA MGP_NODShiLtJ_T0001690.1 MGP_NODShiLtJ_G0001604.1 mouse_genomes_project 5 115313619 115315916 + TEC TEC MGP_NODShiLtJ_T0007997.1 MGP_NODShiLtJ_G0006520.1 mouse_genomes_project 5 26524446 26524796 - Gm10062 lincRNA lincRNA MGP_NODShiLtJ_T0007999.1 MGP_NODShiLtJ_G0006520.1 mouse_genomes_project 5 26524453 26525903 - Gm10062 lincRNA lincRNA MGP_NODShiLtJ_T0001845.1 MGP_NODShiLtJ_G0001757.1 mouse_genomes_project 5 155093392 155100333 - TEC TEC MGP_NODShiLtJ_T0069618.1 MGP_NODShiLtJ_G0029060.1 mouse_genomes_project 5 344365 360979 + MGP_NODShiLtJ_P0069618 1700109H08Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069619.1 MGP_NODShiLtJ_G0029060.1 mouse_genomes_project 5 344472 360994 + MGP_NODShiLtJ_P0069619 1700109H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0069620.1 MGP_NODShiLtJ_G0029060.1 mouse_genomes_project 5 352296 360994 + MGP_NODShiLtJ_P0069620 1700109H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0069621.1 MGP_NODShiLtJ_G0029060.1 mouse_genomes_project 5 354840 357042 + 1700109H08Rik protein_coding retained_intron MGP_NODShiLtJ_T0069622.1 MGP_NODShiLtJ_G0029060.1 mouse_genomes_project 5 357090 360982 + MGP_NODShiLtJ_P0069622 1700109H08Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073068.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129452427 129524807 - MGP_NODShiLtJ_P0073068 Sgsm1 protein_coding protein_coding MGP_NODShiLtJ_T0073069.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129452436 129494753 - MGP_NODShiLtJ_P0073069 Sgsm1 protein_coding protein_coding MGP_NODShiLtJ_T0073070.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129466653 129494753 - Sgsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0073071.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129467292 129524798 - Sgsm1 protein_coding processed_transcript MGP_NODShiLtJ_T0073072.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129474857 129524760 - MGP_NODShiLtJ_P0073072 Sgsm1 protein_coding protein_coding MGP_NODShiLtJ_T0073073.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129475470 129524718 - MGP_NODShiLtJ_P0073073 Sgsm1 protein_coding protein_coding MGP_NODShiLtJ_T0073074.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129488129 129494739 - MGP_NODShiLtJ_P0073074 Sgsm1 protein_coding protein_coding MGP_NODShiLtJ_T0073075.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129490064 129493514 - Sgsm1 protein_coding retained_intron MGP_NODShiLtJ_T0073076.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129493787 129497042 - Sgsm1 protein_coding retained_intron MGP_NODShiLtJ_T0073077.1 MGP_NODShiLtJ_G0029718.1 mouse_genomes_project 5 129499579 129524741 - Sgsm1 protein_coding retained_intron MGP_NODShiLtJ_T0001651.1 MGP_NODShiLtJ_G0001565.1 mouse_genomes_project 5 82926737 82931944 - TEC TEC MGP_NODShiLtJ_T0008389.1 MGP_NODShiLtJ_G0006797.1 mouse_genomes_project 5 169625887 169632518 + 2310047D07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008391.1 MGP_NODShiLtJ_G0006797.1 mouse_genomes_project 5 169631687 169632500 + 2310047D07Rik lincRNA lincRNA MGP_NODShiLtJ_T0004736.1 MGP_NODShiLtJ_G0004083.1 mouse_genomes_project 5 132834789 132848173 + Gm14507 antisense antisense MGP_NODShiLtJ_T0075171.1 MGP_NODShiLtJ_G0030097.1 mouse_genomes_project 5 159100512 159172829 + MGP_NODShiLtJ_P0075171 Elfn1 protein_coding protein_coding MGP_NODShiLtJ_T0075172.1 MGP_NODShiLtJ_G0030097.1 mouse_genomes_project 5 159101043 159169155 + Elfn1 protein_coding processed_transcript MGP_NODShiLtJ_T0070265.1 MGP_NODShiLtJ_G0029177.1 mouse_genomes_project 5 30545239 30569465 + MGP_NODShiLtJ_P0070265 Nom1 protein_coding protein_coding MGP_NODShiLtJ_T0070266.1 MGP_NODShiLtJ_G0029177.1 mouse_genomes_project 5 30551891 30556886 + Nom1 protein_coding retained_intron MGP_NODShiLtJ_T0001854.1 MGP_NODShiLtJ_G0001766.1 mouse_genomes_project 5 160664115 160666485 - TEC TEC MGP_NODShiLtJ_T0014942.1 MGP_NODShiLtJ_G0013050.1 mouse_genomes_project 5 100799011 100799390 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004586.1 MGP_NODShiLtJ_G0003971.1 mouse_genomes_project 5 25060467 25063761 + Gm15589 antisense antisense MGP_NODShiLtJ_T0014736.1 MGP_NODShiLtJ_G0012844.1 mouse_genomes_project 5 7820188 7820933 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001857.1 MGP_NODShiLtJ_G0001769.1 mouse_genomes_project 5 162910397 162912642 - TEC pseudogene MGP_NODShiLtJ_T0072708.1 MGP_NODShiLtJ_G0029641.1 mouse_genomes_project 5 122786818 122831700 + MGP_NODShiLtJ_P0072708 protein_coding protein_coding MGP_NODShiLtJ_T0001693.1 MGP_NODShiLtJ_G0001607.1 mouse_genomes_project 5 116386476 116389070 + TEC TEC MGP_NODShiLtJ_T0073260.1 MGP_NODShiLtJ_G0029753.1 mouse_genomes_project 5 131335580 131344619 + MGP_NODShiLtJ_P0073260 2210016L21Rik protein_coding protein_coding MGP_NODShiLtJ_T0073261.1 MGP_NODShiLtJ_G0029753.1 mouse_genomes_project 5 131335626 131341708 + 2210016L21Rik protein_coding retained_intron MGP_NODShiLtJ_T0073262.1 MGP_NODShiLtJ_G0029753.1 mouse_genomes_project 5 131335632 131341674 + MGP_NODShiLtJ_P0073262 2210016L21Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073263.1 MGP_NODShiLtJ_G0029753.1 mouse_genomes_project 5 131335653 131341045 + 2210016L21Rik protein_coding retained_intron MGP_NODShiLtJ_T0073264.1 MGP_NODShiLtJ_G0029753.1 mouse_genomes_project 5 131340632 131342620 + MGP_NODShiLtJ_P0073264 2210016L21Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070365.1 MGP_NODShiLtJ_G0029198.1 mouse_genomes_project 5 32013059 32066453 + MGP_NODShiLtJ_P0070365 Mapre3 protein_coding protein_coding MGP_NODShiLtJ_T0070366.1 MGP_NODShiLtJ_G0029198.1 mouse_genomes_project 5 32013151 32066406 + Mapre3 protein_coding retained_intron MGP_NODShiLtJ_T0070367.1 MGP_NODShiLtJ_G0029198.1 mouse_genomes_project 5 32013172 32066406 + MGP_NODShiLtJ_P0070367 Mapre3 protein_coding protein_coding MGP_NODShiLtJ_T0070368.1 MGP_NODShiLtJ_G0029198.1 mouse_genomes_project 5 32013178 32062924 + Mapre3 protein_coding retained_intron MGP_NODShiLtJ_T0070369.1 MGP_NODShiLtJ_G0029198.1 mouse_genomes_project 5 32054145 32063705 + MGP_NODShiLtJ_P0070369 Mapre3 protein_coding protein_coding MGP_NODShiLtJ_T0070370.1 MGP_NODShiLtJ_G0029198.1 mouse_genomes_project 5 32064868 32065602 + Mapre3 protein_coding retained_intron MGP_NODShiLtJ_T0099389.1 MGP_NODShiLtJ_G0037783.1 mouse_genomes_project 5 131964419 131965443 + Gm24265 snRNA snRNA MGP_NODShiLtJ_T0072128.1 MGP_NODShiLtJ_G0029509.1 mouse_genomes_project 5 101295456 101303440 - Jchain protein_coding retained_intron MGP_NODShiLtJ_T0072129.1 MGP_NODShiLtJ_G0029509.1 mouse_genomes_project 5 101296160 101305474 - MGP_NODShiLtJ_P0072129 Jchain protein_coding protein_coding MGP_NODShiLtJ_T0014899.1 MGP_NODShiLtJ_G0013007.1 mouse_genomes_project 5 75629387 75629835 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004695.1 MGP_NODShiLtJ_G0004055.1 mouse_genomes_project 5 116444361 116453130 + Gm20548 antisense antisense MGP_NODShiLtJ_T0004696.1 MGP_NODShiLtJ_G0004055.1 mouse_genomes_project 5 116444387 116451226 + Gm20548 antisense antisense MGP_NODShiLtJ_T0004697.1 MGP_NODShiLtJ_G0004055.1 mouse_genomes_project 5 116444397 116451189 + Gm20548 antisense antisense MGP_NODShiLtJ_T0004698.1 MGP_NODShiLtJ_G0004055.1 mouse_genomes_project 5 116444403 116453341 + Gm20548 antisense antisense MGP_NODShiLtJ_T0004699.1 MGP_NODShiLtJ_G0004055.1 mouse_genomes_project 5 116447103 116451281 + Gm20548 antisense antisense MGP_NODShiLtJ_T0071907.1 MGP_NODShiLtJ_G0029449.1 mouse_genomes_project 5 85640444 85701470 + Cep135 protein_coding retained_intron MGP_NODShiLtJ_T0071908.1 MGP_NODShiLtJ_G0029449.1 mouse_genomes_project 5 85640447 85703026 + MGP_NODShiLtJ_P0071908 Cep135 protein_coding protein_coding MGP_NODShiLtJ_T0071909.1 MGP_NODShiLtJ_G0029449.1 mouse_genomes_project 5 85642905 85703023 + MGP_NODShiLtJ_P0071909 Cep135 protein_coding protein_coding MGP_NODShiLtJ_T0001577.1 MGP_NODShiLtJ_G0001493.1 mouse_genomes_project 5 63321745 63322940 + TEC TEC MGP_NODShiLtJ_T0070318.1 MGP_NODShiLtJ_G0029189.1 mouse_genomes_project 5 31435310 31475065 + MGP_NODShiLtJ_P0070318 protein_coding protein_coding MGP_NODShiLtJ_T0070319.1 MGP_NODShiLtJ_G0029189.1 mouse_genomes_project 5 31435364 31437403 + protein_coding retained_intron MGP_NODShiLtJ_T0070320.1 MGP_NODShiLtJ_G0029189.1 mouse_genomes_project 5 31435369 31453792 + protein_coding retained_intron MGP_NODShiLtJ_T0070321.1 MGP_NODShiLtJ_G0029189.1 mouse_genomes_project 5 31435376 31461197 + protein_coding retained_intron MGP_NODShiLtJ_T0070322.1 MGP_NODShiLtJ_G0029189.1 mouse_genomes_project 5 31435379 31460436 + MGP_NODShiLtJ_P0070322 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070323.1 MGP_NODShiLtJ_G0029189.1 mouse_genomes_project 5 31435403 31471611 + MGP_NODShiLtJ_P0070323 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070324.1 MGP_NODShiLtJ_G0029189.1 mouse_genomes_project 5 31465709 31469631 + protein_coding retained_intron MGP_NODShiLtJ_T0070325.1 MGP_NODShiLtJ_G0029189.1 mouse_genomes_project 5 31466189 31469885 + protein_coding processed_transcript MGP_NODShiLtJ_T0001861.1 MGP_NODShiLtJ_G0001773.1 mouse_genomes_project 5 167580858 167581920 + TEC TEC MGP_NODShiLtJ_T0014931.1 MGP_NODShiLtJ_G0013039.1 mouse_genomes_project 5 94390586 94391454 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004700.1 MGP_NODShiLtJ_G0004056.1 mouse_genomes_project 5 117100756 117114151 - 1700013M08Rik antisense antisense MGP_NODShiLtJ_T0004701.1 MGP_NODShiLtJ_G0004056.1 mouse_genomes_project 5 117109142 117109939 - 1700013M08Rik antisense antisense MGP_NODShiLtJ_T0073477.1 MGP_NODShiLtJ_G0029793.1 mouse_genomes_project 5 134838189 134933626 - MGP_NODShiLtJ_P0073477 Fbxw8 protein_coding protein_coding MGP_NODShiLtJ_T0073478.1 MGP_NODShiLtJ_G0029793.1 mouse_genomes_project 5 134850304 134933588 - Fbxw8 protein_coding retained_intron MGP_NODShiLtJ_T0008373.1 MGP_NODShiLtJ_G0006784.1 mouse_genomes_project 5 169038793 169045684 + Gm36186 lincRNA lincRNA MGP_NODShiLtJ_T0008130.1 MGP_NODShiLtJ_G0006619.1 mouse_genomes_project 5 104299054 104325168 - Gm19619 lincRNA lincRNA MGP_NODShiLtJ_T0074931.1 MGP_NODShiLtJ_G0030047.1 mouse_genomes_project 5 156548556 156587639 + MGP_NODShiLtJ_P0074931 Zcwpw1 protein_coding protein_coding MGP_NODShiLtJ_T0074932.1 MGP_NODShiLtJ_G0030047.1 mouse_genomes_project 5 156558801 156562012 + Zcwpw1 protein_coding retained_intron MGP_NODShiLtJ_T0074933.1 MGP_NODShiLtJ_G0030047.1 mouse_genomes_project 5 156566726 156568417 + Zcwpw1 protein_coding retained_intron MGP_NODShiLtJ_T0074934.1 MGP_NODShiLtJ_G0030047.1 mouse_genomes_project 5 156566955 156578965 + Zcwpw1 protein_coding processed_transcript MGP_NODShiLtJ_T0074935.1 MGP_NODShiLtJ_G0030047.1 mouse_genomes_project 5 156578181 156587339 + MGP_NODShiLtJ_P0074935 Zcwpw1 protein_coding protein_coding MGP_NODShiLtJ_T0070151.1 MGP_NODShiLtJ_G0029152.1 mouse_genomes_project 5 25306403 25323450 - MGP_NODShiLtJ_P0070151 Abcf2 protein_coding protein_coding MGP_NODShiLtJ_T0001412.1 MGP_NODShiLtJ_G0001331.1 mouse_genomes_project 5 7334470 7338136 - TEC TEC MGP_NODShiLtJ_T0071241.1 MGP_NODShiLtJ_G0029335.1 mouse_genomes_project 5 48244262 48255483 + MGP_NODShiLtJ_P0071241 Clrn2 protein_coding protein_coding MGP_NODShiLtJ_T0071287.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51692877 51744213 + 5730480H06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0071288.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51736333 51752837 + MGP_NODShiLtJ_P0071288 5730480H06Rik protein_coding protein_coding MGP_NODShiLtJ_T0071289.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51736333 51752837 + MGP_NODShiLtJ_P0071289 5730480H06Rik protein_coding protein_coding MGP_NODShiLtJ_T0071290.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51736437 51752838 + MGP_NODShiLtJ_P0071290 5730480H06Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071291.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51738441 51759609 + MGP_NODShiLtJ_P0071291 5730480H06Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071292.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51744126 51752548 + 5730480H06Rik protein_coding retained_intron MGP_NODShiLtJ_T0071300.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51756828 51762223 + 5730480H06Rik protein_coding retained_intron MGP_NODShiLtJ_T0071301.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51759568 51780380 + 5730480H06Rik protein_coding retained_intron MGP_NODShiLtJ_T0071303.1 MGP_NODShiLtJ_G0029342.1 mouse_genomes_project 5 51760655 51780409 + 5730480H06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0014784.1 MGP_NODShiLtJ_G0012892.1 mouse_genomes_project 5 24798962 24799447 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071125.1 MGP_NODShiLtJ_G0029314.1 mouse_genomes_project 5 40307056 40310208 + MGP_NODShiLtJ_P0071125 Drd5 protein_coding protein_coding MGP_NODShiLtJ_T0014951.1 MGP_NODShiLtJ_G0013059.1 mouse_genomes_project 5 103554018 103554589 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001475.1 MGP_NODShiLtJ_G0001391.1 mouse_genomes_project 5 37227259 37228499 - TEC TEC MGP_NODShiLtJ_T0100633.1 MGP_NODShiLtJ_G0039027.1 mouse_genomes_project 5 114485404 114485487 - Gm26363 snoRNA snoRNA MGP_NODShiLtJ_T0015010.1 MGP_NODShiLtJ_G0013118.1 mouse_genomes_project 5 126917633 126918131 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001770.1 MGP_NODShiLtJ_G0001684.1 mouse_genomes_project 5 139853147 139857829 + TEC TEC MGP_NODShiLtJ_T0008018.1 MGP_NODShiLtJ_G0006533.1 mouse_genomes_project 5 35061966 35062806 - Gm43851 lincRNA lincRNA MGP_NODShiLtJ_T0072703.1 MGP_NODShiLtJ_G0029640.1 mouse_genomes_project 5 122774341 122789082 + MGP_NODShiLtJ_P0072703 protein_coding protein_coding MGP_NODShiLtJ_T0072704.1 MGP_NODShiLtJ_G0029640.1 mouse_genomes_project 5 122774708 122790431 + MGP_NODShiLtJ_P0072704 protein_coding protein_coding MGP_NODShiLtJ_T0072705.1 MGP_NODShiLtJ_G0029640.1 mouse_genomes_project 5 122774739 122784965 + MGP_NODShiLtJ_P0072705 protein_coding protein_coding MGP_NODShiLtJ_T0072706.1 MGP_NODShiLtJ_G0029640.1 mouse_genomes_project 5 122774742 122788083 + MGP_NODShiLtJ_P0072706 protein_coding protein_coding MGP_NODShiLtJ_T0072707.1 MGP_NODShiLtJ_G0029640.1 mouse_genomes_project 5 122781817 122785097 + protein_coding processed_transcript MGP_NODShiLtJ_T0073761.1 MGP_NODShiLtJ_G0029849.1 mouse_genomes_project 5 139719786 139727734 - MGP_NODShiLtJ_P0073761 Fam216a protein_coding protein_coding MGP_NODShiLtJ_T0015016.1 MGP_NODShiLtJ_G0013124.1 mouse_genomes_project 5 131184895 131185538 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099398.1 MGP_NODShiLtJ_G0037792.1 mouse_genomes_project 5 144083804 144083911 - Gm23151 snRNA snRNA MGP_NODShiLtJ_T0008406.1 MGP_NODShiLtJ_G0006807.1 mouse_genomes_project 5 171153625 171161514 - Gm43597 lincRNA lincRNA MGP_NODShiLtJ_T0008407.1 MGP_NODShiLtJ_G0006807.1 mouse_genomes_project 5 171153630 171161477 - Gm43597 lincRNA lincRNA MGP_NODShiLtJ_T0008408.1 MGP_NODShiLtJ_G0006807.1 mouse_genomes_project 5 171155593 171161394 - Gm43597 lincRNA lincRNA MGP_NODShiLtJ_T0072744.1 MGP_NODShiLtJ_G0029649.1 mouse_genomes_project 5 123221716 123312770 - MGP_NODShiLtJ_P0072744 Fam69a protein_coding protein_coding MGP_NODShiLtJ_T0072745.1 MGP_NODShiLtJ_G0029649.1 mouse_genomes_project 5 123223366 123312724 - MGP_NODShiLtJ_P0072745 Fam69a protein_coding protein_coding MGP_NODShiLtJ_T0072746.1 MGP_NODShiLtJ_G0029649.1 mouse_genomes_project 5 123230661 123294295 - MGP_NODShiLtJ_P0072746 Fam69a protein_coding protein_coding MGP_NODShiLtJ_T0001558.1 MGP_NODShiLtJ_G0001474.1 mouse_genomes_project 5 55914537 55916982 - TEC TEC MGP_NODShiLtJ_T0004714.1 MGP_NODShiLtJ_G0004067.1 mouse_genomes_project 5 126280960 126282962 - Gm15792 antisense antisense MGP_NODShiLtJ_T0008221.1 MGP_NODShiLtJ_G0006681.1 mouse_genomes_project 5 128016506 128020939 - Gm42488 lincRNA lincRNA MGP_NODShiLtJ_T0073501.1 MGP_NODShiLtJ_G0029799.1 mouse_genomes_project 5 136764075 136774541 + MGP_NODShiLtJ_P0073501 Tbx5 protein_coding protein_coding MGP_NODShiLtJ_T0073502.1 MGP_NODShiLtJ_G0029799.1 mouse_genomes_project 5 136767263 136823341 + MGP_NODShiLtJ_P0073502 Tbx5 protein_coding protein_coding MGP_NODShiLtJ_T0073503.1 MGP_NODShiLtJ_G0029799.1 mouse_genomes_project 5 136769805 136778752 + MGP_NODShiLtJ_P0073503 Tbx5 protein_coding protein_coding MGP_NODShiLtJ_T0001680.1 MGP_NODShiLtJ_G0001594.1 mouse_genomes_project 5 110804209 110806355 + TEC TEC MGP_NODShiLtJ_T0014761.1 MGP_NODShiLtJ_G0012869.1 mouse_genomes_project 5 21570886 21572282 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075509.1 MGP_NODShiLtJ_G0030168.1 mouse_genomes_project 5 164963870 164969824 + MGP_NODShiLtJ_P0075509 protein_coding protein_coding MGP_NODShiLtJ_T0075510.1 MGP_NODShiLtJ_G0030168.1 mouse_genomes_project 5 164963890 164975650 + MGP_NODShiLtJ_P0075510 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0075511.1 MGP_NODShiLtJ_G0030168.1 mouse_genomes_project 5 164966713 164974633 + MGP_NODShiLtJ_P0075511 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072130.1 MGP_NODShiLtJ_G0029510.1 mouse_genomes_project 5 101331721 101333350 + MGP_NODShiLtJ_P0072130 Utp3 protein_coding protein_coding MGP_NODShiLtJ_T0001485.1 MGP_NODShiLtJ_G0001401.1 mouse_genomes_project 5 41723268 41726686 - TEC TEC MGP_NODShiLtJ_T0074280.1 MGP_NODShiLtJ_G0029932.1 mouse_genomes_project 5 147771427 147787756 - MGP_NODShiLtJ_P0074280 Psph protein_coding protein_coding MGP_NODShiLtJ_T0074281.1 MGP_NODShiLtJ_G0029932.1 mouse_genomes_project 5 147775113 147778956 - Psph protein_coding processed_transcript MGP_NODShiLtJ_T0074282.1 MGP_NODShiLtJ_G0029932.1 mouse_genomes_project 5 147775189 147787519 - MGP_NODShiLtJ_P0074282 Psph protein_coding protein_coding MGP_NODShiLtJ_T0074283.1 MGP_NODShiLtJ_G0029932.1 mouse_genomes_project 5 147778500 147795506 - MGP_NODShiLtJ_P0074283 Psph protein_coding protein_coding MGP_NODShiLtJ_T0074284.1 MGP_NODShiLtJ_G0029932.1 mouse_genomes_project 5 147779230 147787512 - Psph protein_coding retained_intron MGP_NODShiLtJ_T0074285.1 MGP_NODShiLtJ_G0029932.1 mouse_genomes_project 5 147785164 147795604 - Psph protein_coding retained_intron MGP_NODShiLtJ_T0074286.1 MGP_NODShiLtJ_G0029932.1 mouse_genomes_project 5 147787686 147795559 - Psph protein_coding processed_transcript MGP_NODShiLtJ_T0075231.1 MGP_NODShiLtJ_G0030110.1 mouse_genomes_project 5 160059349 160131279 - MGP_NODShiLtJ_P0075231 Gna12 protein_coding protein_coding MGP_NODShiLtJ_T0008233.1 MGP_NODShiLtJ_G0006687.1 mouse_genomes_project 5 128745934 128752993 - 1700034G24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008234.1 MGP_NODShiLtJ_G0006687.1 mouse_genomes_project 5 128746023 128752993 - 1700034G24Rik lincRNA lincRNA MGP_NODShiLtJ_T0014921.1 MGP_NODShiLtJ_G0013029.1 mouse_genomes_project 5 85808481 85808922 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001641.1 MGP_NODShiLtJ_G0001556.1 mouse_genomes_project 5 81249187 81250177 - TEC TEC MGP_NODShiLtJ_T0069759.1 MGP_NODShiLtJ_G0029082.1 mouse_genomes_project 5 5507699 5530079 + MGP_NODShiLtJ_P0069759 Steap4 protein_coding protein_coding MGP_NODShiLtJ_T0075755.1 MGP_NODShiLtJ_G0030220.1 mouse_genomes_project 5 171162517 171203159 - N4bp2l2 protein_coding processed_transcript MGP_NODShiLtJ_T0075756.1 MGP_NODShiLtJ_G0030220.1 mouse_genomes_project 5 171191748 171222315 - MGP_NODShiLtJ_P0075756 N4bp2l2 protein_coding protein_coding MGP_NODShiLtJ_T0075757.1 MGP_NODShiLtJ_G0030220.1 mouse_genomes_project 5 171196339 171203901 - N4bp2l2 protein_coding retained_intron MGP_NODShiLtJ_T0075758.1 MGP_NODShiLtJ_G0030220.1 mouse_genomes_project 5 171198603 171217641 - MGP_NODShiLtJ_P0075758 N4bp2l2 protein_coding protein_coding MGP_NODShiLtJ_T0075759.1 MGP_NODShiLtJ_G0030220.1 mouse_genomes_project 5 171198616 171203433 - N4bp2l2 protein_coding retained_intron MGP_NODShiLtJ_T0075760.1 MGP_NODShiLtJ_G0030220.1 mouse_genomes_project 5 171203849 171222280 - N4bp2l2 protein_coding retained_intron MGP_NODShiLtJ_T0075761.1 MGP_NODShiLtJ_G0030220.1 mouse_genomes_project 5 171218570 171222052 - MGP_NODShiLtJ_P0075761 N4bp2l2 protein_coding protein_coding MGP_NODShiLtJ_T0075762.1 MGP_NODShiLtJ_G0030220.1 mouse_genomes_project 5 171221880 171222886 - N4bp2l2 protein_coding retained_intron MGP_NODShiLtJ_T0070239.1 MGP_NODShiLtJ_G0029173.1 mouse_genomes_project 5 29377506 29414291 + MGP_NODShiLtJ_P0070239 Rbm33 protein_coding non_stop_decay MGP_NODShiLtJ_T0070240.1 MGP_NODShiLtJ_G0029173.1 mouse_genomes_project 5 29377562 29479971 + MGP_NODShiLtJ_P0070240 Rbm33 protein_coding protein_coding MGP_NODShiLtJ_T0070241.1 MGP_NODShiLtJ_G0029173.1 mouse_genomes_project 5 29377562 29483110 + MGP_NODShiLtJ_P0070241 Rbm33 protein_coding protein_coding MGP_NODShiLtJ_T0070242.1 MGP_NODShiLtJ_G0029173.1 mouse_genomes_project 5 29377587 29417171 + MGP_NODShiLtJ_P0070242 Rbm33 protein_coding protein_coding MGP_NODShiLtJ_T0070243.1 MGP_NODShiLtJ_G0029173.1 mouse_genomes_project 5 29456648 29477542 + MGP_NODShiLtJ_P0070243 Rbm33 protein_coding protein_coding MGP_NODShiLtJ_T0070244.1 MGP_NODShiLtJ_G0029173.1 mouse_genomes_project 5 29474524 29477895 + MGP_NODShiLtJ_P0070244 Rbm33 protein_coding protein_coding MGP_NODShiLtJ_T0074605.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154139660 154211695 + MGP_NODShiLtJ_P0074605 Por protein_coding protein_coding MGP_NODShiLtJ_T0074606.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154145862 154160355 + Por protein_coding processed_transcript MGP_NODShiLtJ_T0074607.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154145866 154211151 + MGP_NODShiLtJ_P0074607 Por protein_coding protein_coding MGP_NODShiLtJ_T0074608.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154164461 154215360 + MGP_NODShiLtJ_P0074608 Por protein_coding protein_coding MGP_NODShiLtJ_T0074609.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154164583 154215360 + MGP_NODShiLtJ_P0074609 Por protein_coding protein_coding MGP_NODShiLtJ_T0074610.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154195022 154211912 + Por protein_coding retained_intron MGP_NODShiLtJ_T0074611.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154205724 154210275 + MGP_NODShiLtJ_P0074611 Por protein_coding protein_coding MGP_NODShiLtJ_T0074612.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154211583 154213949 + Por protein_coding retained_intron MGP_NODShiLtJ_T0074613.1 MGP_NODShiLtJ_G0029989.1 mouse_genomes_project 5 154213214 154214081 + Por protein_coding retained_intron MGP_NODShiLtJ_T0075071.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158126556 158248689 - MGP_NODShiLtJ_P0075071 Prkar1b protein_coding protein_coding MGP_NODShiLtJ_T0075072.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158127913 158133058 - Prkar1b protein_coding processed_transcript MGP_NODShiLtJ_T0075073.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158155096 158246761 - MGP_NODShiLtJ_P0075073 Prkar1b protein_coding protein_coding MGP_NODShiLtJ_T0075074.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158163307 158249101 - MGP_NODShiLtJ_P0075074 Prkar1b protein_coding protein_coding MGP_NODShiLtJ_T0075075.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158176103 158230039 - MGP_NODShiLtJ_P0075075 Prkar1b protein_coding protein_coding MGP_NODShiLtJ_T0075076.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158226035 158249518 - MGP_NODShiLtJ_P0075076 Prkar1b protein_coding protein_coding MGP_NODShiLtJ_T0075077.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158226062 158268686 - MGP_NODShiLtJ_P0075077 Prkar1b protein_coding protein_coding MGP_NODShiLtJ_T0075078.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158226128 158249325 - MGP_NODShiLtJ_P0075078 Prkar1b protein_coding protein_coding MGP_NODShiLtJ_T0075079.1 MGP_NODShiLtJ_G0030078.1 mouse_genomes_project 5 158266738 158268642 - Prkar1b protein_coding processed_transcript MGP_NODShiLtJ_T0071356.1 MGP_NODShiLtJ_G0029354.1 mouse_genomes_project 5 56957502 56981905 + MGP_NODShiLtJ_P0071356 Slc34a2 protein_coding protein_coding MGP_NODShiLtJ_T0071357.1 MGP_NODShiLtJ_G0029354.1 mouse_genomes_project 5 56969848 56993894 + MGP_NODShiLtJ_P0071357 Slc34a2 protein_coding protein_coding MGP_NODShiLtJ_T0071358.1 MGP_NODShiLtJ_G0029354.1 mouse_genomes_project 5 56969849 56986778 + Slc34a2 protein_coding retained_intron MGP_NODShiLtJ_T0075239.1 MGP_NODShiLtJ_G0030113.1 mouse_genomes_project 5 161815258 161833791 + MGP_NODShiLtJ_P0075239 Foxk1 protein_coding protein_coding MGP_NODShiLtJ_T0075240.1 MGP_NODShiLtJ_G0030113.1 mouse_genomes_project 5 161815261 161877633 + MGP_NODShiLtJ_P0075240 Foxk1 protein_coding protein_coding MGP_NODShiLtJ_T0011485.1 MGP_NODShiLtJ_G0009618.1 mouse_genomes_project 5 73834381 73834704 - Gm23183 misc_RNA misc_RNA MGP_NODShiLtJ_T0004726.1 MGP_NODShiLtJ_G0004076.1 mouse_genomes_project 5 131122458 131123705 - 4930515G01Rik antisense antisense MGP_NODShiLtJ_T0004612.1 MGP_NODShiLtJ_G0003993.1 mouse_genomes_project 5 37564432 37566361 + Gm15650 antisense antisense MGP_NODShiLtJ_T0001654.1 MGP_NODShiLtJ_G0001568.1 mouse_genomes_project 5 83060611 83064525 - TEC TEC MGP_NODShiLtJ_T0004786.1 MGP_NODShiLtJ_G0004116.1 mouse_genomes_project 5 146179368 146185375 + Gm42817 antisense antisense MGP_NODShiLtJ_T0004691.1 MGP_NODShiLtJ_G0004052.1 mouse_genomes_project 5 114506177 114523499 + Tmem150cos antisense antisense MGP_NODShiLtJ_T0004692.1 MGP_NODShiLtJ_G0004052.1 mouse_genomes_project 5 114520246 114523623 + Tmem150cos antisense antisense MGP_NODShiLtJ_T0008007.1 MGP_NODShiLtJ_G0006525.1 mouse_genomes_project 5 30476499 30489446 + 4632411P08Rik lincRNA lincRNA MGP_NODShiLtJ_T0014810.1 MGP_NODShiLtJ_G0012918.1 mouse_genomes_project 5 30993439 30994659 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014773.1 MGP_NODShiLtJ_G0012881.1 mouse_genomes_project 5 23240096 23241110 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008232.1 MGP_NODShiLtJ_G0006686.1 mouse_genomes_project 5 128745643 128746377 + Gm27004 lincRNA lincRNA MGP_NODShiLtJ_T0008225.1 MGP_NODShiLtJ_G0006684.1 mouse_genomes_project 5 128326558 128342703 - Miat lincRNA lincRNA MGP_NODShiLtJ_T0008226.1 MGP_NODShiLtJ_G0006684.1 mouse_genomes_project 5 128326560 128342256 - Miat lincRNA lincRNA MGP_NODShiLtJ_T0008228.1 MGP_NODShiLtJ_G0006684.1 mouse_genomes_project 5 128334700 128341952 - Miat lincRNA lincRNA MGP_NODShiLtJ_T0008229.1 MGP_NODShiLtJ_G0006684.1 mouse_genomes_project 5 128334991 128342237 - Miat lincRNA lincRNA MGP_NODShiLtJ_T0008230.1 MGP_NODShiLtJ_G0006684.1 mouse_genomes_project 5 128335189 128341983 - Miat lincRNA lincRNA MGP_NODShiLtJ_T0008231.1 MGP_NODShiLtJ_G0006684.1 mouse_genomes_project 5 128341413 128341949 - Miat lincRNA lincRNA MGP_NODShiLtJ_T0014764.1 MGP_NODShiLtJ_G0012872.1 mouse_genomes_project 5 22069141 22073132 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014872.1 MGP_NODShiLtJ_G0012980.1 mouse_genomes_project 5 64821797 64822751 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099344.1 MGP_NODShiLtJ_G0037738.1 mouse_genomes_project 5 34473064 34473164 + Gm24003 snRNA snRNA MGP_NODShiLtJ_T0015105.1 MGP_NODShiLtJ_G0013213.1 mouse_genomes_project 5 171883080 171883604 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072933.1 MGP_NODShiLtJ_G0029691.1 mouse_genomes_project 5 126641203 126646214 - MGP_NODShiLtJ_P0072933 Noc4l protein_coding protein_coding MGP_NODShiLtJ_T0072934.1 MGP_NODShiLtJ_G0029691.1 mouse_genomes_project 5 126641632 126642803 - Noc4l protein_coding retained_intron MGP_NODShiLtJ_T0072935.1 MGP_NODShiLtJ_G0029691.1 mouse_genomes_project 5 126643855 126646053 - Noc4l protein_coding retained_intron MGP_NODShiLtJ_T0072936.1 MGP_NODShiLtJ_G0029691.1 mouse_genomes_project 5 126644029 126646145 - Noc4l protein_coding retained_intron MGP_NODShiLtJ_T0072937.1 MGP_NODShiLtJ_G0029691.1 mouse_genomes_project 5 126644149 126646163 - Noc4l protein_coding retained_intron MGP_NODShiLtJ_T0072938.1 MGP_NODShiLtJ_G0029691.1 mouse_genomes_project 5 126645798 126646177 - Noc4l protein_coding retained_intron MGP_NODShiLtJ_T0001607.1 MGP_NODShiLtJ_G0001522.1 mouse_genomes_project 5 73418569 73419470 + TEC TEC MGP_NODShiLtJ_T0073627.1 MGP_NODShiLtJ_G0029829.1 mouse_genomes_project 5 138705377 138708376 - MGP_NODShiLtJ_P0073627 Adam1b protein_coding protein_coding MGP_NODShiLtJ_T0010581.1 MGP_NODShiLtJ_G0008714.1 mouse_genomes_project 5 73454486 73454560 - Gm25952 miRNA miRNA MGP_NODShiLtJ_T0004663.1 MGP_NODShiLtJ_G0004033.1 mouse_genomes_project 5 85323369 85324021 + Gm7467 antisense antisense MGP_NODShiLtJ_T0070556.1 MGP_NODShiLtJ_G0029225.1 mouse_genomes_project 5 32539529 32543224 - MGP_NODShiLtJ_P0070556 Fndc4 protein_coding protein_coding MGP_NODShiLtJ_T0070557.1 MGP_NODShiLtJ_G0029225.1 mouse_genomes_project 5 32540173 32541001 - MGP_NODShiLtJ_P0070557 Fndc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070558.1 MGP_NODShiLtJ_G0029225.1 mouse_genomes_project 5 32540173 32543159 - MGP_NODShiLtJ_P0070558 Fndc4 protein_coding protein_coding MGP_NODShiLtJ_T0070559.1 MGP_NODShiLtJ_G0029225.1 mouse_genomes_project 5 32540559 32541254 - Fndc4 protein_coding retained_intron MGP_NODShiLtJ_T0070560.1 MGP_NODShiLtJ_G0029225.1 mouse_genomes_project 5 32540973 32542721 - MGP_NODShiLtJ_P0070560 Fndc4 protein_coding protein_coding MGP_NODShiLtJ_T0070561.1 MGP_NODShiLtJ_G0029225.1 mouse_genomes_project 5 32541373 32542547 - Fndc4 protein_coding retained_intron MGP_NODShiLtJ_T0070562.1 MGP_NODShiLtJ_G0029225.1 mouse_genomes_project 5 32542002 32543368 - MGP_NODShiLtJ_P0070562 Fndc4 protein_coding protein_coding MGP_NODShiLtJ_T0008060.1 MGP_NODShiLtJ_G0006562.1 mouse_genomes_project 5 54176184 54334730 + Gm43016 lincRNA lincRNA MGP_NODShiLtJ_T0001725.1 MGP_NODShiLtJ_G0001639.1 mouse_genomes_project 5 129323002 129324784 - TEC TEC MGP_NODShiLtJ_T0073455.1 MGP_NODShiLtJ_G0029789.1 mouse_genomes_project 5 134128458 134283288 + Ksr2 protein_coding retained_intron MGP_NODShiLtJ_T0073456.1 MGP_NODShiLtJ_G0029789.1 mouse_genomes_project 5 134128458 134520484 + MGP_NODShiLtJ_P0073456 Ksr2 protein_coding protein_coding MGP_NODShiLtJ_T0073457.1 MGP_NODShiLtJ_G0029789.1 mouse_genomes_project 5 134129287 134511034 + MGP_NODShiLtJ_P0073457 Ksr2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0004819.1 MGP_NODShiLtJ_G0004141.1 mouse_genomes_project 5 159428083 159433021 + Gm16120 antisense antisense MGP_NODShiLtJ_T0004820.1 MGP_NODShiLtJ_G0004141.1 mouse_genomes_project 5 159431811 159433021 + Gm16120 antisense antisense MGP_NODShiLtJ_T0099342.1 MGP_NODShiLtJ_G0037736.1 mouse_genomes_project 5 31691831 31691938 - Gm25666 snRNA snRNA MGP_NODShiLtJ_T0001838.1 MGP_NODShiLtJ_G0001750.1 mouse_genomes_project 5 152851908 152853373 - TEC TEC MGP_NODShiLtJ_T0072576.1 MGP_NODShiLtJ_G0029606.1 mouse_genomes_project 5 118695232 118720707 - MGP_NODShiLtJ_P0072576 Hsd17b13 protein_coding protein_coding MGP_NODShiLtJ_T0072577.1 MGP_NODShiLtJ_G0029606.1 mouse_genomes_project 5 118705330 118720669 - MGP_NODShiLtJ_P0072577 Hsd17b13 protein_coding protein_coding MGP_NODShiLtJ_T0072578.1 MGP_NODShiLtJ_G0029606.1 mouse_genomes_project 5 118705330 118720753 - MGP_NODShiLtJ_P0072578 Hsd17b13 protein_coding protein_coding MGP_NODShiLtJ_T0004759.1 MGP_NODShiLtJ_G0004098.1 mouse_genomes_project 5 139002032 139011286 - Gm16552 antisense antisense MGP_NODShiLtJ_T0015028.1 MGP_NODShiLtJ_G0013136.1 mouse_genomes_project 5 138673703 138674529 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075710.1 MGP_NODShiLtJ_G0030215.1 mouse_genomes_project 5 170502316 170554409 + Rxfp2 protein_coding retained_intron MGP_NODShiLtJ_T0075711.1 MGP_NODShiLtJ_G0030215.1 mouse_genomes_project 5 170502316 170568446 + MGP_NODShiLtJ_P0075711 Rxfp2 protein_coding protein_coding MGP_NODShiLtJ_T0075712.1 MGP_NODShiLtJ_G0030215.1 mouse_genomes_project 5 170502316 170568446 + MGP_NODShiLtJ_P0075712 Rxfp2 protein_coding protein_coding MGP_NODShiLtJ_T0075713.1 MGP_NODShiLtJ_G0030215.1 mouse_genomes_project 5 170502347 170568438 + MGP_NODShiLtJ_P0075713 Rxfp2 protein_coding protein_coding MGP_NODShiLtJ_T0075714.1 MGP_NODShiLtJ_G0030215.1 mouse_genomes_project 5 170552225 170555711 + Rxfp2 protein_coding retained_intron MGP_NODShiLtJ_T0075715.1 MGP_NODShiLtJ_G0030215.1 mouse_genomes_project 5 170567724 170569294 + Rxfp2 protein_coding processed_transcript MGP_NODShiLtJ_T0015077.1 MGP_NODShiLtJ_G0013185.1 mouse_genomes_project 5 164325500 164325671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072272.1 MGP_NODShiLtJ_G0029548.1 mouse_genomes_project 5 105454121 105483033 - MGP_NODShiLtJ_P0072272 Sdad1 protein_coding protein_coding MGP_NODShiLtJ_T0072273.1 MGP_NODShiLtJ_G0029548.1 mouse_genomes_project 5 105456852 105482903 - MGP_NODShiLtJ_P0072273 Sdad1 protein_coding protein_coding MGP_NODShiLtJ_T0072274.1 MGP_NODShiLtJ_G0029548.1 mouse_genomes_project 5 105462557 105467825 - Sdad1 protein_coding retained_intron MGP_NODShiLtJ_T0072275.1 MGP_NODShiLtJ_G0029548.1 mouse_genomes_project 5 105463383 105473349 - Sdad1 protein_coding retained_intron MGP_NODShiLtJ_T0072276.1 MGP_NODShiLtJ_G0029548.1 mouse_genomes_project 5 105474650 105482998 - Sdad1 protein_coding retained_intron MGP_NODShiLtJ_T0072277.1 MGP_NODShiLtJ_G0029548.1 mouse_genomes_project 5 105476662 105477668 - Sdad1 protein_coding retained_intron MGP_NODShiLtJ_T0072278.1 MGP_NODShiLtJ_G0029548.1 mouse_genomes_project 5 105478743 105483488 - MGP_NODShiLtJ_P0072278 Sdad1 protein_coding protein_coding MGP_NODShiLtJ_T0001694.1 MGP_NODShiLtJ_G0001608.1 mouse_genomes_project 5 116414398 116415998 + TEC TEC MGP_NODShiLtJ_T0001533.1 MGP_NODShiLtJ_G0001449.1 mouse_genomes_project 5 52441573 52442401 - TEC TEC MGP_NODShiLtJ_T0070841.1 MGP_NODShiLtJ_G0029270.1 mouse_genomes_project 5 36292395 36318185 + MGP_NODShiLtJ_P0070841 Sh3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0070842.1 MGP_NODShiLtJ_G0029270.1 mouse_genomes_project 5 36292403 36330147 + MGP_NODShiLtJ_P0070842 Sh3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0070843.1 MGP_NODShiLtJ_G0029270.1 mouse_genomes_project 5 36309904 36324207 + Sh3bp2 protein_coding retained_intron MGP_NODShiLtJ_T0070844.1 MGP_NODShiLtJ_G0029270.1 mouse_genomes_project 5 36309904 36319226 + MGP_NODShiLtJ_P0070844 Sh3bp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070845.1 MGP_NODShiLtJ_G0029270.1 mouse_genomes_project 5 36309904 36330131 + MGP_NODShiLtJ_P0070845 Sh3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0070846.1 MGP_NODShiLtJ_G0029270.1 mouse_genomes_project 5 36316057 36330131 + MGP_NODShiLtJ_P0070846 Sh3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0070847.1 MGP_NODShiLtJ_G0029270.1 mouse_genomes_project 5 36316169 36330144 + MGP_NODShiLtJ_P0070847 Sh3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0070848.1 MGP_NODShiLtJ_G0029270.1 mouse_genomes_project 5 36318029 36319272 + Sh3bp2 protein_coding retained_intron MGP_NODShiLtJ_T0007989.1 MGP_NODShiLtJ_G0006515.1 mouse_genomes_project 5 24030747 24065736 - lincRNA lincRNA MGP_NODShiLtJ_T0007990.1 MGP_NODShiLtJ_G0006515.1 mouse_genomes_project 5 24054113 24065709 - lincRNA lincRNA MGP_NODShiLtJ_T0007991.1 MGP_NODShiLtJ_G0006515.1 mouse_genomes_project 5 24064195 24066319 - lincRNA lincRNA MGP_NODShiLtJ_T0007992.1 MGP_NODShiLtJ_G0006515.1 mouse_genomes_project 5 24064672 24066669 - lincRNA lincRNA MGP_NODShiLtJ_T0072159.1 MGP_NODShiLtJ_G0029517.1 mouse_genomes_project 5 102400545 102464593 + MGP_NODShiLtJ_P0072159 Npffr2 protein_coding protein_coding MGP_NODShiLtJ_T0008107.1 MGP_NODShiLtJ_G0006600.1 mouse_genomes_project 5 84827610 84830237 - Gm19590 lincRNA lincRNA MGP_NODShiLtJ_T0072843.1 MGP_NODShiLtJ_G0029669.1 mouse_genomes_project 5 124884558 124912840 - MGP_NODShiLtJ_P0072843 protein_coding protein_coding MGP_NODShiLtJ_T0072143.1 MGP_NODShiLtJ_G0029513.1 mouse_genomes_project 5 101512334 101542170 + Mob1b protein_coding retained_intron MGP_NODShiLtJ_T0072144.1 MGP_NODShiLtJ_G0029513.1 mouse_genomes_project 5 101512334 101559601 + MGP_NODShiLtJ_P0072144 Mob1b protein_coding protein_coding MGP_NODShiLtJ_T0072145.1 MGP_NODShiLtJ_G0029513.1 mouse_genomes_project 5 101512350 101552699 + MGP_NODShiLtJ_P0072145 Mob1b protein_coding protein_coding MGP_NODShiLtJ_T0072146.1 MGP_NODShiLtJ_G0029513.1 mouse_genomes_project 5 101512456 101542885 + Mob1b protein_coding retained_intron MGP_NODShiLtJ_T0008069.1 MGP_NODShiLtJ_G0006571.1 mouse_genomes_project 5 64009858 64025860 - lincRNA lincRNA MGP_NODShiLtJ_T0014850.1 MGP_NODShiLtJ_G0012958.1 mouse_genomes_project 5 50932577 50933025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074023.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141670181 141672946 + Ogfod2 protein_coding retained_intron MGP_NODShiLtJ_T0074024.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141670185 141672367 + MGP_NODShiLtJ_P0074024 Ogfod2 protein_coding protein_coding MGP_NODShiLtJ_T0074025.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141670198 141672839 + MGP_NODShiLtJ_P0074025 Ogfod2 protein_coding protein_coding MGP_NODShiLtJ_T0074026.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141670200 141672235 + Ogfod2 protein_coding retained_intron MGP_NODShiLtJ_T0074027.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141670200 141672323 + MGP_NODShiLtJ_P0074027 Ogfod2 protein_coding protein_coding MGP_NODShiLtJ_T0074028.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141670217 141672627 + MGP_NODShiLtJ_P0074028 Ogfod2 protein_coding protein_coding MGP_NODShiLtJ_T0074029.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141670291 141672828 + MGP_NODShiLtJ_P0074029 Ogfod2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074030.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141670675 141672078 + Ogfod2 protein_coding retained_intron MGP_NODShiLtJ_T0074031.1 MGP_NODShiLtJ_G0029888.1 mouse_genomes_project 5 141671163 141672743 + Ogfod2 protein_coding retained_intron MGP_NODShiLtJ_T0008172.1 MGP_NODShiLtJ_G0006652.1 mouse_genomes_project 5 119013605 119020993 - Gm42792 lincRNA lincRNA MGP_NODShiLtJ_T0004834.1 MGP_NODShiLtJ_G0004150.1 mouse_genomes_project 5 169298537 169302198 - Gm15410 antisense antisense MGP_NODShiLtJ_T0008138.1 MGP_NODShiLtJ_G0006627.1 mouse_genomes_project 5 110936677 110962444 - lincRNA lincRNA MGP_NODShiLtJ_T0101138.1 MGP_NODShiLtJ_G0039472.1 mouse_genomes_project 5 23055202 23055982 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101139.1 MGP_NODShiLtJ_G0039472.1 mouse_genomes_project 5 23055224 23056507 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0074095.1 MGP_NODShiLtJ_G0029896.1 mouse_genomes_project 5 142056031 142071084 - MGP_NODShiLtJ_P0074095 Rilpl2 protein_coding protein_coding MGP_NODShiLtJ_T0074096.1 MGP_NODShiLtJ_G0029896.1 mouse_genomes_project 5 142067986 142071028 - Rilpl2 protein_coding retained_intron MGP_NODShiLtJ_T0098389.1 MGP_NODShiLtJ_G0036794.1 mouse_genomes_project 5 1867672 1870874 - Gm43112 sense_intronic sense_intronic MGP_NODShiLtJ_T0073549.1 MGP_NODShiLtJ_G0029810.1 mouse_genomes_project 5 137627445 137633345 - MGP_NODShiLtJ_P0073549 Cfap73 protein_coding protein_coding MGP_NODShiLtJ_T0008139.1 MGP_NODShiLtJ_G0006628.1 mouse_genomes_project 5 110961539 110978246 + Gm8013 lincRNA lincRNA MGP_NODShiLtJ_T0001581.1 MGP_NODShiLtJ_G0001497.1 mouse_genomes_project 5 64848751 64867087 + TEC TEC MGP_NODShiLtJ_T0098394.1 MGP_NODShiLtJ_G0036799.1 mouse_genomes_project 5 2463062 2465528 - Gm43728 sense_intronic sense_intronic MGP_NODShiLtJ_T0075302.1 MGP_NODShiLtJ_G0030125.1 mouse_genomes_project 5 162660369 162670371 - MGP_NODShiLtJ_P0075302 Rbak protein_coding protein_coding MGP_NODShiLtJ_T0075303.1 MGP_NODShiLtJ_G0030125.1 mouse_genomes_project 5 162660369 162670416 - MGP_NODShiLtJ_P0075303 Rbak protein_coding protein_coding MGP_NODShiLtJ_T0075304.1 MGP_NODShiLtJ_G0030125.1 mouse_genomes_project 5 162660370 162666375 - Rbak protein_coding retained_intron MGP_NODShiLtJ_T0075305.1 MGP_NODShiLtJ_G0030125.1 mouse_genomes_project 5 162668606 162670373 - Rbak protein_coding retained_intron MGP_NODShiLtJ_T0072226.1 MGP_NODShiLtJ_G0029537.1 mouse_genomes_project 5 104162975 104171795 + MGP_NODShiLtJ_P0072226 Areg protein_coding protein_coding MGP_NODShiLtJ_T0072079.1 MGP_NODShiLtJ_G0029489.1 mouse_genomes_project 5 99960423 99992297 - MGP_NODShiLtJ_P0072079 Sult1b1 protein_coding protein_coding MGP_NODShiLtJ_T0072080.1 MGP_NODShiLtJ_G0029489.1 mouse_genomes_project 5 99960423 99990328 - MGP_NODShiLtJ_P0072080 Sult1b1 protein_coding protein_coding MGP_NODShiLtJ_T0072081.1 MGP_NODShiLtJ_G0029489.1 mouse_genomes_project 5 99961741 99989252 - MGP_NODShiLtJ_P0072081 Sult1b1 protein_coding protein_coding MGP_NODShiLtJ_T0074779.1 MGP_NODShiLtJ_G0030020.1 mouse_genomes_project 5 155782348 155796752 - MGP_NODShiLtJ_P0074779 Muc3 protein_coding protein_coding MGP_NODShiLtJ_T0074780.1 MGP_NODShiLtJ_G0030020.1 mouse_genomes_project 5 155782387 155786608 - Muc3 protein_coding processed_transcript MGP_NODShiLtJ_T0069790.1 MGP_NODShiLtJ_G0029086.1 mouse_genomes_project 5 5745602 5751530 + MGP_NODShiLtJ_P0069790 protein_coding protein_coding MGP_NODShiLtJ_T0099334.1 MGP_NODShiLtJ_G0037728.1 mouse_genomes_project 5 19687517 19687620 - Gm25335 snRNA snRNA MGP_NODShiLtJ_T0072890.1 MGP_NODShiLtJ_G0029683.1 mouse_genomes_project 5 126169580 126196213 + MGP_NODShiLtJ_P0072890 Ankle2 protein_coding protein_coding MGP_NODShiLtJ_T0072891.1 MGP_NODShiLtJ_G0029683.1 mouse_genomes_project 5 126169580 126195021 + MGP_NODShiLtJ_P0072891 Ankle2 protein_coding protein_coding MGP_NODShiLtJ_T0072892.1 MGP_NODShiLtJ_G0029683.1 mouse_genomes_project 5 126169617 126196209 + MGP_NODShiLtJ_P0072892 Ankle2 protein_coding protein_coding MGP_NODShiLtJ_T0072893.1 MGP_NODShiLtJ_G0029683.1 mouse_genomes_project 5 126169739 126176954 + Ankle2 protein_coding retained_intron MGP_NODShiLtJ_T0072894.1 MGP_NODShiLtJ_G0029683.1 mouse_genomes_project 5 126176294 126177036 + Ankle2 protein_coding retained_intron MGP_NODShiLtJ_T0072895.1 MGP_NODShiLtJ_G0029683.1 mouse_genomes_project 5 126189528 126192617 + Ankle2 protein_coding processed_transcript MGP_NODShiLtJ_T0015001.1 MGP_NODShiLtJ_G0013109.1 mouse_genomes_project 5 124833103 124834988 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001664.1 MGP_NODShiLtJ_G0001578.1 mouse_genomes_project 5 85713699 85716116 - TEC TEC MGP_NODShiLtJ_T0015068.1 MGP_NODShiLtJ_G0013176.1 mouse_genomes_project 5 162322421 162323005 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004613.1 MGP_NODShiLtJ_G0003994.1 mouse_genomes_project 5 38624168 38625988 + Gm43701 antisense antisense MGP_NODShiLtJ_T0015031.1 MGP_NODShiLtJ_G0013139.1 mouse_genomes_project 5 139655478 139656096 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072038.1 MGP_NODShiLtJ_G0029470.1 mouse_genomes_project 5 98404623 98476112 - MGP_NODShiLtJ_P0072038 Tmprss11c protein_coding protein_coding MGP_NODShiLtJ_T0072039.1 MGP_NODShiLtJ_G0029470.1 mouse_genomes_project 5 98404894 98476064 - MGP_NODShiLtJ_P0072039 Tmprss11c protein_coding protein_coding MGP_NODShiLtJ_T0018031.1 MGP_NODShiLtJ_G0015477.1 mouse_genomes_project 5 140840121 140842301 + 5830487J09Rik processed_transcript sense_intronic MGP_NODShiLtJ_T0018032.1 MGP_NODShiLtJ_G0015477.1 mouse_genomes_project 5 140841337 140843259 + 5830487J09Rik processed_transcript TEC MGP_NODShiLtJ_T0015009.1 MGP_NODShiLtJ_G0013117.1 mouse_genomes_project 5 126885581 126886252 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008186.1 MGP_NODShiLtJ_G0006661.1 mouse_genomes_project 5 121665169 121670374 - Gm26872 lincRNA lincRNA MGP_NODShiLtJ_T0004639.1 MGP_NODShiLtJ_G0004012.1 mouse_genomes_project 5 56968183 56969685 - Gm17182 antisense antisense MGP_NODShiLtJ_T0073239.1 MGP_NODShiLtJ_G0029748.1 mouse_genomes_project 5 131157703 131176042 - MGP_NODShiLtJ_P0073239 Gm20499 protein_coding protein_coding MGP_NODShiLtJ_T0008156.1 MGP_NODShiLtJ_G0006641.1 mouse_genomes_project 5 114629661 114633775 + Gm9932 lincRNA lincRNA MGP_NODShiLtJ_T0007971.1 MGP_NODShiLtJ_G0006503.1 mouse_genomes_project 5 3614440 3627199 + Gm43325 lincRNA lincRNA MGP_NODShiLtJ_T0070072.1 MGP_NODShiLtJ_G0029138.1 mouse_genomes_project 5 24882706 24902501 + MGP_NODShiLtJ_P0070072 Nupl2 protein_coding protein_coding MGP_NODShiLtJ_T0070073.1 MGP_NODShiLtJ_G0029138.1 mouse_genomes_project 5 24882743 24901322 + MGP_NODShiLtJ_P0070073 Nupl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070074.1 MGP_NODShiLtJ_G0029138.1 mouse_genomes_project 5 24885250 24888750 + Nupl2 protein_coding retained_intron MGP_NODShiLtJ_T0070075.1 MGP_NODShiLtJ_G0029138.1 mouse_genomes_project 5 24896611 24899917 + Nupl2 protein_coding retained_intron MGP_NODShiLtJ_T0008246.1 MGP_NODShiLtJ_G0006695.1 mouse_genomes_project 5 131809432 131810857 - 4930401G09Rik lincRNA lincRNA MGP_NODShiLtJ_T0008257.1 MGP_NODShiLtJ_G0006704.1 mouse_genomes_project 5 133475024 133478610 + Gm29926 lincRNA lincRNA MGP_NODShiLtJ_T0072371.1 MGP_NODShiLtJ_G0029565.1 mouse_genomes_project 5 110197109 110253948 + MGP_NODShiLtJ_P0072371 Mrpl1 protein_coding protein_coding MGP_NODShiLtJ_T0072372.1 MGP_NODShiLtJ_G0029565.1 mouse_genomes_project 5 110197731 110253937 + MGP_NODShiLtJ_P0072372 Mrpl1 protein_coding protein_coding MGP_NODShiLtJ_T0072373.1 MGP_NODShiLtJ_G0029565.1 mouse_genomes_project 5 110197760 110227097 + MGP_NODShiLtJ_P0072373 Mrpl1 protein_coding protein_coding MGP_NODShiLtJ_T0073215.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131074445 131122217 - MGP_NODShiLtJ_P0073215 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073216.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131074446 131122214 - MGP_NODShiLtJ_P0073216 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073217.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131074449 131090714 - MGP_NODShiLtJ_P0073217 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073218.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131074449 131122214 - MGP_NODShiLtJ_P0073218 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073219.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131074449 131122156 - MGP_NODShiLtJ_P0073219 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073220.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131076613 131122184 - MGP_NODShiLtJ_P0073220 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073221.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131076908 131122217 - MGP_NODShiLtJ_P0073221 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073222.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131080254 131081205 - Git2 protein_coding processed_transcript MGP_NODShiLtJ_T0073223.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131080902 131096015 - MGP_NODShiLtJ_P0073223 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073224.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131085291 131088208 - Git2 protein_coding retained_intron MGP_NODShiLtJ_T0073225.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131095064 131122217 - Git2 protein_coding retained_intron MGP_NODShiLtJ_T0073226.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131095952 131115244 - MGP_NODShiLtJ_P0073226 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073227.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131102982 131110422 - Git2 protein_coding retained_intron MGP_NODShiLtJ_T0073228.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131113077 131124239 - MGP_NODShiLtJ_P0073228 Git2 protein_coding protein_coding MGP_NODShiLtJ_T0073229.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131113181 131122217 - Git2 protein_coding processed_transcript MGP_NODShiLtJ_T0073230.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131113268 131115875 - Git2 protein_coding processed_transcript MGP_NODShiLtJ_T0073231.1 MGP_NODShiLtJ_G0029745.1 mouse_genomes_project 5 131114395 131122189 - Git2 protein_coding retained_intron MGP_NODShiLtJ_T0014832.1 MGP_NODShiLtJ_G0012940.1 mouse_genomes_project 5 37396205 37397992 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010561.1 MGP_NODShiLtJ_G0008694.1 mouse_genomes_project 5 23282662 23282761 + Gm44363 miRNA miRNA MGP_NODShiLtJ_T0008013.1 MGP_NODShiLtJ_G0006530.1 mouse_genomes_project 5 32880713 32882516 - AI839979 lincRNA lincRNA MGP_NODShiLtJ_T0008014.1 MGP_NODShiLtJ_G0006530.1 mouse_genomes_project 5 32881223 32882510 - AI839979 lincRNA lincRNA MGP_NODShiLtJ_T0073291.1 MGP_NODShiLtJ_G0029761.1 mouse_genomes_project 5 131675599 131680977 + MGP_NODShiLtJ_P0073291 Pop5 protein_coding protein_coding MGP_NODShiLtJ_T0073292.1 MGP_NODShiLtJ_G0029761.1 mouse_genomes_project 5 131677964 131680228 + Pop5 protein_coding processed_transcript MGP_NODShiLtJ_T0073293.1 MGP_NODShiLtJ_G0029761.1 mouse_genomes_project 5 131678017 131685351 + MGP_NODShiLtJ_P0073293 Pop5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073294.1 MGP_NODShiLtJ_G0029761.1 mouse_genomes_project 5 131678020 131680930 + Pop5 protein_coding processed_transcript MGP_NODShiLtJ_T0073295.1 MGP_NODShiLtJ_G0029761.1 mouse_genomes_project 5 131678032 131680653 + Pop5 protein_coding retained_intron MGP_NODShiLtJ_T0073296.1 MGP_NODShiLtJ_G0029761.1 mouse_genomes_project 5 131680326 131680952 + Pop5 protein_coding processed_transcript MGP_NODShiLtJ_T0069863.1 MGP_NODShiLtJ_G0029100.1 mouse_genomes_project 5 10880327 11203765 + MGP_NODShiLtJ_P0069863 Sema3d protein_coding protein_coding MGP_NODShiLtJ_T0069864.1 MGP_NODShiLtJ_G0029100.1 mouse_genomes_project 5 10880448 11148313 + Sema3d protein_coding processed_transcript MGP_NODShiLtJ_T0069865.1 MGP_NODShiLtJ_G0029100.1 mouse_genomes_project 5 10880448 11179474 + MGP_NODShiLtJ_P0069865 Sema3d protein_coding protein_coding MGP_NODShiLtJ_T0069866.1 MGP_NODShiLtJ_G0029100.1 mouse_genomes_project 5 11021089 11090770 + Sema3d protein_coding processed_transcript MGP_NODShiLtJ_T0069867.1 MGP_NODShiLtJ_G0029100.1 mouse_genomes_project 5 11173633 11202116 + Sema3d protein_coding processed_transcript MGP_NODShiLtJ_T0073311.1 MGP_NODShiLtJ_G0029764.1 mouse_genomes_project 5 131739686 131744276 - MGP_NODShiLtJ_P0073311 protein_coding protein_coding MGP_NODShiLtJ_T0073312.1 MGP_NODShiLtJ_G0029764.1 mouse_genomes_project 5 131742827 131744156 - protein_coding processed_transcript MGP_NODShiLtJ_T0071040.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38930555 39001617 + MGP_NODShiLtJ_P0071040 Jakmip1 protein_coding protein_coding MGP_NODShiLtJ_T0071041.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38931331 38995488 + Jakmip1 protein_coding processed_transcript MGP_NODShiLtJ_T0071042.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38932086 39001713 + MGP_NODShiLtJ_P0071042 Jakmip1 protein_coding protein_coding MGP_NODShiLtJ_T0071043.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38932106 39001412 + MGP_NODShiLtJ_P0071043 Jakmip1 protein_coding protein_coding MGP_NODShiLtJ_T0071044.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38949413 38995508 + Jakmip1 protein_coding processed_transcript MGP_NODShiLtJ_T0071045.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38949825 38997133 + Jakmip1 protein_coding retained_intron MGP_NODShiLtJ_T0071046.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38949866 39014812 + MGP_NODShiLtJ_P0071046 Jakmip1 protein_coding protein_coding MGP_NODShiLtJ_T0071047.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38953291 39036145 + MGP_NODShiLtJ_P0071047 Jakmip1 protein_coding protein_coding MGP_NODShiLtJ_T0071048.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38953350 38997412 + Jakmip1 protein_coding retained_intron MGP_NODShiLtJ_T0071049.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38995547 39058523 + MGP_NODShiLtJ_P0071049 Jakmip1 protein_coding protein_coding MGP_NODShiLtJ_T0071050.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 38995547 39058523 + MGP_NODShiLtJ_P0071050 Jakmip1 protein_coding protein_coding MGP_NODShiLtJ_T0071051.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 39001249 39002199 + Jakmip1 protein_coding retained_intron MGP_NODShiLtJ_T0071052.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 39033816 39035865 + Jakmip1 protein_coding retained_intron MGP_NODShiLtJ_T0071053.1 MGP_NODShiLtJ_G0029301.1 mouse_genomes_project 5 39037071 39061811 + MGP_NODShiLtJ_P0071053 Jakmip1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0001676.1 MGP_NODShiLtJ_G0001590.1 mouse_genomes_project 5 106344071 106346209 + TEC TEC MGP_NODShiLtJ_T0004718.1 MGP_NODShiLtJ_G0004071.1 mouse_genomes_project 5 128500772 128504043 - Gm20636 antisense antisense MGP_NODShiLtJ_T0001519.1 MGP_NODShiLtJ_G0001435.1 mouse_genomes_project 5 51349050 51351648 + TEC TEC MGP_NODShiLtJ_T0007969.1 MGP_NODShiLtJ_G0006501.1 mouse_genomes_project 5 1822711 1841145 - Gm42744 lincRNA lincRNA MGP_NODShiLtJ_T0014737.1 MGP_NODShiLtJ_G0012845.1 mouse_genomes_project 5 8044006 8045471 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001616.1 MGP_NODShiLtJ_G0001531.1 mouse_genomes_project 5 74039376 74042133 - TEC TEC MGP_NODShiLtJ_T0069963.1 MGP_NODShiLtJ_G0029117.1 mouse_genomes_project 5 21828105 21833712 + MGP_NODShiLtJ_P0069963 Fgl2 protein_coding protein_coding MGP_NODShiLtJ_T0014818.1 MGP_NODShiLtJ_G0012926.1 mouse_genomes_project 5 34331780 34368581 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075629.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168189390 168588274 + MGP_NODShiLtJ_P0075629 Mtus2 protein_coding protein_coding MGP_NODShiLtJ_T0075630.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168189412 168314223 + MGP_NODShiLtJ_P0075630 Mtus2 protein_coding protein_coding MGP_NODShiLtJ_T0075631.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168320310 168494288 + Mtus2 protein_coding retained_intron MGP_NODShiLtJ_T0075632.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168331571 168458208 + Mtus2 protein_coding processed_transcript MGP_NODShiLtJ_T0075633.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168446971 168586260 + MGP_NODShiLtJ_P0075633 Mtus2 protein_coding protein_coding MGP_NODShiLtJ_T0075634.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168496561 168499746 + Mtus2 protein_coding retained_intron MGP_NODShiLtJ_T0075635.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168527938 168584922 + MGP_NODShiLtJ_P0075635 Mtus2 protein_coding protein_coding MGP_NODShiLtJ_T0075636.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168528013 168584400 + MGP_NODShiLtJ_P0075636 Mtus2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075637.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168528066 168584889 + MGP_NODShiLtJ_P0075637 Mtus2 protein_coding protein_coding MGP_NODShiLtJ_T0075638.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168570180 168584308 + MGP_NODShiLtJ_P0075638 Mtus2 protein_coding protein_coding MGP_NODShiLtJ_T0075639.1 MGP_NODShiLtJ_G0030202.1 mouse_genomes_project 5 168570189 168584851 + MGP_NODShiLtJ_P0075639 Mtus2 protein_coding protein_coding MGP_NODShiLtJ_T0001478.1 MGP_NODShiLtJ_G0001394.1 mouse_genomes_project 5 37398224 37398870 - TEC TEC MGP_NODShiLtJ_T0072337.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106346515 106430301 + MGP_NODShiLtJ_P0072337 Sept11 protein_coding protein_coding MGP_NODShiLtJ_T0072338.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106346516 106347156 + Sept11 protein_coding retained_intron MGP_NODShiLtJ_T0072339.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106346516 106425318 + MGP_NODShiLtJ_P0072339 Sept11 protein_coding protein_coding MGP_NODShiLtJ_T0072340.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106346526 106416802 + MGP_NODShiLtJ_P0072340 Sept11 protein_coding protein_coding MGP_NODShiLtJ_T0072341.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106346529 106431779 + MGP_NODShiLtJ_P0072341 Sept11 protein_coding protein_coding MGP_NODShiLtJ_T0072342.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106346604 106431789 + MGP_NODShiLtJ_P0072342 Sept11 protein_coding protein_coding MGP_NODShiLtJ_T0072343.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106346614 106403075 + MGP_NODShiLtJ_P0072343 Sept11 protein_coding protein_coding MGP_NODShiLtJ_T0072344.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106346649 106431419 + MGP_NODShiLtJ_P0072344 Sept11 protein_coding protein_coding MGP_NODShiLtJ_T0072345.1 MGP_NODShiLtJ_G0029559.1 mouse_genomes_project 5 106403034 106412327 + Sept11 protein_coding retained_intron MGP_NODShiLtJ_T0001594.1 MGP_NODShiLtJ_G0001509.1 mouse_genomes_project 5 72877699 72880572 - TEC TEC MGP_NODShiLtJ_T0071475.1 MGP_NODShiLtJ_G0029378.1 mouse_genomes_project 5 72738001 72773824 + MGP_NODShiLtJ_P0071475 Klb protein_coding protein_coding MGP_NODShiLtJ_T0071476.1 MGP_NODShiLtJ_G0029378.1 mouse_genomes_project 5 72738094 72739933 + Klb protein_coding retained_intron MGP_NODShiLtJ_T0071477.1 MGP_NODShiLtJ_G0029378.1 mouse_genomes_project 5 72738095 72769334 + MGP_NODShiLtJ_P0071477 Klb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099343.1 MGP_NODShiLtJ_G0037737.1 mouse_genomes_project 5 33536763 33536870 + Gm26335 snRNA snRNA MGP_NODShiLtJ_T0015022.1 MGP_NODShiLtJ_G0013130.1 mouse_genomes_project 5 131734189 131734327 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070190.1 MGP_NODShiLtJ_G0029160.1 mouse_genomes_project 5 25965549 26008390 + MGP_NODShiLtJ_P0070190 Galntl5 protein_coding protein_coding MGP_NODShiLtJ_T0070191.1 MGP_NODShiLtJ_G0029160.1 mouse_genomes_project 5 25965591 26008388 + MGP_NODShiLtJ_P0070191 Galntl5 protein_coding protein_coding MGP_NODShiLtJ_T0001568.1 MGP_NODShiLtJ_G0001484.1 mouse_genomes_project 5 62900593 62900748 + TEC TEC MGP_NODShiLtJ_T0014927.1 MGP_NODShiLtJ_G0013035.1 mouse_genomes_project 5 89165491 89165509 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010636.1 MGP_NODShiLtJ_G0008769.1 mouse_genomes_project 5 167416861 167416971 - Mir7k miRNA miRNA MGP_NODShiLtJ_T0014856.1 MGP_NODShiLtJ_G0012964.1 mouse_genomes_project 5 54623203 54623769 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100615.1 MGP_NODShiLtJ_G0039009.1 mouse_genomes_project 5 69487892 69488024 - Gm24079 snoRNA snoRNA MGP_NODShiLtJ_T0014740.1 MGP_NODShiLtJ_G0012848.1 mouse_genomes_project 5 8874426 8874682 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001679.1 MGP_NODShiLtJ_G0001593.1 mouse_genomes_project 5 106441022 106442930 - TEC TEC MGP_NODShiLtJ_T0004781.1 MGP_NODShiLtJ_G0004113.1 mouse_genomes_project 5 142635244 142635774 + Gm42838 antisense antisense MGP_NODShiLtJ_T0001668.1 MGP_NODShiLtJ_G0001582.1 mouse_genomes_project 5 92736889 92738306 - TEC TEC MGP_NODShiLtJ_T0001800.1 MGP_NODShiLtJ_G0001713.1 mouse_genomes_project 5 147956118 147959503 + TEC TEC MGP_NODShiLtJ_T0069755.1 MGP_NODShiLtJ_G0029081.1 mouse_genomes_project 5 4764199 4764572 + 4921511H03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0069756.1 MGP_NODShiLtJ_G0029081.1 mouse_genomes_project 5 4764205 4774779 + MGP_NODShiLtJ_P0069756 4921511H03Rik protein_coding protein_coding MGP_NODShiLtJ_T0069757.1 MGP_NODShiLtJ_G0029081.1 mouse_genomes_project 5 4764212 4770589 + MGP_NODShiLtJ_P0069757 4921511H03Rik protein_coding protein_coding MGP_NODShiLtJ_T0069758.1 MGP_NODShiLtJ_G0029081.1 mouse_genomes_project 5 4764226 4765889 + MGP_NODShiLtJ_P0069758 4921511H03Rik protein_coding protein_coding MGP_NODShiLtJ_T0001645.1 MGP_NODShiLtJ_G0001559.1 mouse_genomes_project 5 81814865 81818249 - TEC TEC MGP_NODShiLtJ_T0098409.1 MGP_NODShiLtJ_G0036814.1 mouse_genomes_project 5 133207846 133210762 - sense_intronic sense_intronic MGP_NODShiLtJ_T0001765.1 MGP_NODShiLtJ_G0001679.1 mouse_genomes_project 5 139142963 139144141 - TEC TEC MGP_NODShiLtJ_T0001730.1 MGP_NODShiLtJ_G0001644.1 mouse_genomes_project 5 130142703 130145979 + TEC TEC MGP_NODShiLtJ_T0072854.1 MGP_NODShiLtJ_G0029678.1 mouse_genomes_project 5 126036160 126040135 + MGP_NODShiLtJ_P0072854 Plcxd1 protein_coding protein_coding MGP_NODShiLtJ_T0072855.1 MGP_NODShiLtJ_G0029678.1 mouse_genomes_project 5 126036613 126038135 + MGP_NODShiLtJ_P0072855 Plcxd1 protein_coding protein_coding MGP_NODShiLtJ_T0072856.1 MGP_NODShiLtJ_G0029678.1 mouse_genomes_project 5 126036750 126042268 + MGP_NODShiLtJ_P0072856 Plcxd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072857.1 MGP_NODShiLtJ_G0029678.1 mouse_genomes_project 5 126037459 126042273 + Plcxd1 protein_coding processed_transcript MGP_NODShiLtJ_T0073207.1 MGP_NODShiLtJ_G0029744.1 mouse_genomes_project 5 131054799 131069366 + MGP_NODShiLtJ_P0073207 Tchp protein_coding protein_coding MGP_NODShiLtJ_T0073208.1 MGP_NODShiLtJ_G0029744.1 mouse_genomes_project 5 131054858 131056480 + Tchp protein_coding processed_transcript MGP_NODShiLtJ_T0073209.1 MGP_NODShiLtJ_G0029744.1 mouse_genomes_project 5 131054903 131069366 + Tchp protein_coding retained_intron MGP_NODShiLtJ_T0073210.1 MGP_NODShiLtJ_G0029744.1 mouse_genomes_project 5 131058105 131060938 + Tchp protein_coding retained_intron MGP_NODShiLtJ_T0073211.1 MGP_NODShiLtJ_G0029744.1 mouse_genomes_project 5 131061674 131066728 + MGP_NODShiLtJ_P0073211 Tchp protein_coding protein_coding MGP_NODShiLtJ_T0073212.1 MGP_NODShiLtJ_G0029744.1 mouse_genomes_project 5 131061999 131069366 + Tchp protein_coding processed_transcript MGP_NODShiLtJ_T0073213.1 MGP_NODShiLtJ_G0029744.1 mouse_genomes_project 5 131064598 131065758 + Tchp protein_coding retained_intron MGP_NODShiLtJ_T0073214.1 MGP_NODShiLtJ_G0029744.1 mouse_genomes_project 5 131066722 131068197 + Tchp protein_coding retained_intron MGP_NODShiLtJ_T0001830.1 MGP_NODShiLtJ_G0001743.1 mouse_genomes_project 5 150718805 150719629 - TEC TEC MGP_NODShiLtJ_T0014759.1 MGP_NODShiLtJ_G0012867.1 mouse_genomes_project 5 21228328 21228699 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008000.1 MGP_NODShiLtJ_G0006522.1 mouse_genomes_project 5 27373212 27408439 - 4930584F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008001.1 MGP_NODShiLtJ_G0006522.1 mouse_genomes_project 5 27373214 27408464 - 4930584F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008002.1 MGP_NODShiLtJ_G0006522.1 mouse_genomes_project 5 27373216 27408428 - 4930584F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008003.1 MGP_NODShiLtJ_G0006522.1 mouse_genomes_project 5 27390076 27408439 - 4930584F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0070685.1 MGP_NODShiLtJ_G0029245.1 mouse_genomes_project 5 34688067 34757804 + MGP_NODShiLtJ_P0070685 Slc5a1 protein_coding protein_coding MGP_NODShiLtJ_T0014959.1 MGP_NODShiLtJ_G0013067.1 mouse_genomes_project 5 106253779 106255225 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008149.1 MGP_NODShiLtJ_G0006635.1 mouse_genomes_project 5 113361971 113512338 - Gm43251 lincRNA lincRNA MGP_NODShiLtJ_T0074104.1 MGP_NODShiLtJ_G0029899.1 mouse_genomes_project 5 142141568 142152569 + MGP_NODShiLtJ_P0074104 Tmed2 protein_coding protein_coding MGP_NODShiLtJ_T0074105.1 MGP_NODShiLtJ_G0029899.1 mouse_genomes_project 5 142141828 142151255 + MGP_NODShiLtJ_P0074105 Tmed2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074106.1 MGP_NODShiLtJ_G0029899.1 mouse_genomes_project 5 142142202 142151473 + MGP_NODShiLtJ_P0074106 Tmed2 protein_coding protein_coding MGP_NODShiLtJ_T0074107.1 MGP_NODShiLtJ_G0029899.1 mouse_genomes_project 5 142142209 142142627 + Tmed2 protein_coding retained_intron MGP_NODShiLtJ_T0001474.1 MGP_NODShiLtJ_G0001390.1 mouse_genomes_project 5 36341177 36341646 + TEC TEC MGP_NODShiLtJ_T0014918.1 MGP_NODShiLtJ_G0013026.1 mouse_genomes_project 5 85073409 85073759 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008182.1 MGP_NODShiLtJ_G0006657.1 mouse_genomes_project 5 121517755 121519599 + Gm32921 lincRNA lincRNA MGP_NODShiLtJ_T0001523.1 MGP_NODShiLtJ_G0001439.1 mouse_genomes_project 5 51689547 51690940 + TEC TEC MGP_NODShiLtJ_T0011481.1 MGP_NODShiLtJ_G0009614.1 mouse_genomes_project 5 25972461 25972744 - Gm26356 misc_RNA misc_RNA MGP_NODShiLtJ_T0008250.1 MGP_NODShiLtJ_G0006698.1 mouse_genomes_project 5 132563727 132566195 - Gm13842 lincRNA lincRNA MGP_NODShiLtJ_T0008251.1 MGP_NODShiLtJ_G0006698.1 mouse_genomes_project 5 132564162 132566589 - Gm13842 lincRNA lincRNA MGP_NODShiLtJ_T0073555.1 MGP_NODShiLtJ_G0029812.1 mouse_genomes_project 5 137683683 137716141 - MGP_NODShiLtJ_P0073555 Dtx1 protein_coding protein_coding MGP_NODShiLtJ_T0073556.1 MGP_NODShiLtJ_G0029812.1 mouse_genomes_project 5 137683684 137698901 - Dtx1 protein_coding retained_intron MGP_NODShiLtJ_T0073557.1 MGP_NODShiLtJ_G0029812.1 mouse_genomes_project 5 137683730 137685559 - Dtx1 protein_coding retained_intron MGP_NODShiLtJ_T0073558.1 MGP_NODShiLtJ_G0029812.1 mouse_genomes_project 5 137684682 137686395 - Dtx1 protein_coding retained_intron MGP_NODShiLtJ_T0073559.1 MGP_NODShiLtJ_G0029812.1 mouse_genomes_project 5 137684932 137686293 - Dtx1 protein_coding retained_intron MGP_NODShiLtJ_T0073560.1 MGP_NODShiLtJ_G0029812.1 mouse_genomes_project 5 137698218 137710090 - Dtx1 protein_coding processed_transcript MGP_NODShiLtJ_T0074484.1 MGP_NODShiLtJ_G0029963.1 mouse_genomes_project 5 152958236 152979727 - MGP_NODShiLtJ_P0074484 Eif4h protein_coding protein_coding MGP_NODShiLtJ_T0074485.1 MGP_NODShiLtJ_G0029963.1 mouse_genomes_project 5 152958392 152979584 - MGP_NODShiLtJ_P0074485 Eif4h protein_coding protein_coding MGP_NODShiLtJ_T0074486.1 MGP_NODShiLtJ_G0029963.1 mouse_genomes_project 5 152962394 152979562 - Eif4h protein_coding retained_intron MGP_NODShiLtJ_T0074487.1 MGP_NODShiLtJ_G0029963.1 mouse_genomes_project 5 152963397 152979539 - Eif4h protein_coding retained_intron MGP_NODShiLtJ_T0074488.1 MGP_NODShiLtJ_G0029963.1 mouse_genomes_project 5 152977698 152979547 - Eif4h protein_coding retained_intron MGP_NODShiLtJ_T0004675.1 MGP_NODShiLtJ_G0004043.1 mouse_genomes_project 5 104069588 104089618 - Gm42532 antisense antisense MGP_NODShiLtJ_T0100631.1 MGP_NODShiLtJ_G0039025.1 mouse_genomes_project 5 114043561 114043693 + Gm25969 snoRNA snoRNA MGP_NODShiLtJ_T0008110.1 MGP_NODShiLtJ_G0006603.1 mouse_genomes_project 5 85528027 85561009 + lincRNA lincRNA MGP_NODShiLtJ_T0008111.1 MGP_NODShiLtJ_G0006603.1 mouse_genomes_project 5 85528321 85560965 + lincRNA lincRNA MGP_NODShiLtJ_T0010614.1 MGP_NODShiLtJ_G0008747.1 mouse_genomes_project 5 152779088 152779187 + Gm26340 miRNA miRNA MGP_NODShiLtJ_T0008348.1 MGP_NODShiLtJ_G0006762.1 mouse_genomes_project 5 156415798 156422324 - Gm15498 lincRNA lincRNA MGP_NODShiLtJ_T0101951.1 MGP_NODShiLtJ_G0040119.1 mouse_genomes_project 5 99391955 99393018 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0073937.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141071030 141188007 - MGP_NODShiLtJ_P0073937 Clip1 protein_coding protein_coding MGP_NODShiLtJ_T0073938.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141071030 141187711 - MGP_NODShiLtJ_P0073938 Clip1 protein_coding protein_coding MGP_NODShiLtJ_T0073939.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141071042 141187664 - MGP_NODShiLtJ_P0073939 Clip1 protein_coding protein_coding MGP_NODShiLtJ_T0073940.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141071042 141146060 - MGP_NODShiLtJ_P0073940 Clip1 protein_coding protein_coding MGP_NODShiLtJ_T0073941.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141071053 141095716 - Clip1 protein_coding retained_intron MGP_NODShiLtJ_T0073942.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141071102 141071789 - Clip1 protein_coding processed_transcript MGP_NODShiLtJ_T0073943.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141072064 141187714 - MGP_NODShiLtJ_P0073943 Clip1 protein_coding protein_coding MGP_NODShiLtJ_T0073944.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141072305 141104083 - Clip1 protein_coding retained_intron MGP_NODShiLtJ_T0073945.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141072475 141155209 - MGP_NODShiLtJ_P0073945 Clip1 protein_coding protein_coding MGP_NODShiLtJ_T0073946.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141072682 141109738 - MGP_NODShiLtJ_P0073946 Clip1 protein_coding protein_coding MGP_NODShiLtJ_T0073947.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141079262 141109379 - Clip1 protein_coding retained_intron MGP_NODShiLtJ_T0073948.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141083138 141095625 - Clip1 protein_coding retained_intron MGP_NODShiLtJ_T0073949.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141109572 141155099 - MGP_NODShiLtJ_P0073949 Clip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073950.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141109621 141167559 - MGP_NODShiLtJ_P0073950 Clip1 protein_coding protein_coding MGP_NODShiLtJ_T0073951.1 MGP_NODShiLtJ_G0029876.1 mouse_genomes_project 5 141129234 141131924 - Clip1 protein_coding retained_intron MGP_NODShiLtJ_T0008129.1 MGP_NODShiLtJ_G0006618.1 mouse_genomes_project 5 103935530 103937701 + Gm42530 lincRNA lincRNA MGP_NODShiLtJ_T0004629.1 MGP_NODShiLtJ_G0004005.1 mouse_genomes_project 5 47374368 47394579 + Gm43507 antisense antisense MGP_NODShiLtJ_T0004630.1 MGP_NODShiLtJ_G0004005.1 mouse_genomes_project 5 47385628 47395990 + Gm43507 antisense antisense MGP_NODShiLtJ_T0008319.1 MGP_NODShiLtJ_G0006743.1 mouse_genomes_project 5 144972382 144972786 - Gm43476 lincRNA lincRNA MGP_NODShiLtJ_T0071755.1 MGP_NODShiLtJ_G0029423.1 mouse_genomes_project 5 81772275 81783475 + MGP_NODShiLtJ_P0071755 Zar1 protein_coding protein_coding MGP_NODShiLtJ_T0071756.1 MGP_NODShiLtJ_G0029423.1 mouse_genomes_project 5 81772764 81783472 + MGP_NODShiLtJ_P0071756 Zar1 protein_coding protein_coding MGP_NODShiLtJ_T0004643.1 MGP_NODShiLtJ_G0004016.1 mouse_genomes_project 5 73011150 73014826 - Gm42726 antisense antisense MGP_NODShiLtJ_T0072044.1 MGP_NODShiLtJ_G0029473.1 mouse_genomes_project 5 98704694 98738577 - MGP_NODShiLtJ_P0072044 Tmprss11g protein_coding protein_coding MGP_NODShiLtJ_T0072045.1 MGP_NODShiLtJ_G0029473.1 mouse_genomes_project 5 98705185 98738548 - MGP_NODShiLtJ_P0072045 Tmprss11g protein_coding protein_coding MGP_NODShiLtJ_T0072046.1 MGP_NODShiLtJ_G0029473.1 mouse_genomes_project 5 98707173 98709459 - Tmprss11g protein_coding retained_intron MGP_NODShiLtJ_T0071096.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40162221 40178670 - Zbtb49 protein_coding processed_transcript MGP_NODShiLtJ_T0071097.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40172566 40192944 - MGP_NODShiLtJ_P0071097 Zbtb49 protein_coding protein_coding MGP_NODShiLtJ_T0071098.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40172732 40192900 - MGP_NODShiLtJ_P0071098 Zbtb49 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071099.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40172735 40192912 - MGP_NODShiLtJ_P0071099 Zbtb49 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071100.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40173120 40192912 - MGP_NODShiLtJ_P0071100 Zbtb49 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071101.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40173120 40192914 - MGP_NODShiLtJ_P0071101 Zbtb49 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071102.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40175734 40176284 - MGP_NODShiLtJ_P0071102 Zbtb49 protein_coding protein_coding MGP_NODShiLtJ_T0071103.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40176235 40186039 - MGP_NODShiLtJ_P0071103 Zbtb49 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071104.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40176291 40192918 - MGP_NODShiLtJ_P0071104 Zbtb49 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071105.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40184524 40192941 - MGP_NODShiLtJ_P0071105 Zbtb49 protein_coding protein_coding MGP_NODShiLtJ_T0071106.1 MGP_NODShiLtJ_G0029310.1 mouse_genomes_project 5 40187865 40192911 - Zbtb49 protein_coding retained_intron MGP_NODShiLtJ_T0074649.1 MGP_NODShiLtJ_G0029997.1 mouse_genomes_project 5 154492765 154503426 + MGP_NODShiLtJ_P0074649 Zp3 protein_coding protein_coding MGP_NODShiLtJ_T0074650.1 MGP_NODShiLtJ_G0029997.1 mouse_genomes_project 5 154492834 154502094 + MGP_NODShiLtJ_P0074650 Zp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074394.1 MGP_NODShiLtJ_G0029955.1 mouse_genomes_project 5 152489566 152533143 + MGP_NODShiLtJ_P0074394 Gtf2ird2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074395.1 MGP_NODShiLtJ_G0029955.1 mouse_genomes_project 5 152489595 152525623 + MGP_NODShiLtJ_P0074395 Gtf2ird2 protein_coding protein_coding MGP_NODShiLtJ_T0074396.1 MGP_NODShiLtJ_G0029955.1 mouse_genomes_project 5 152504300 152504928 + Gtf2ird2 protein_coding processed_transcript MGP_NODShiLtJ_T0074397.1 MGP_NODShiLtJ_G0029955.1 mouse_genomes_project 5 152512940 152523685 + Gtf2ird2 protein_coding retained_intron MGP_NODShiLtJ_T0074398.1 MGP_NODShiLtJ_G0029955.1 mouse_genomes_project 5 152521579 152524083 + MGP_NODShiLtJ_P0074398 Gtf2ird2 protein_coding protein_coding MGP_NODShiLtJ_T0001599.1 MGP_NODShiLtJ_G0001514.1 mouse_genomes_project 5 73054001 73059712 + TEC TEC MGP_NODShiLtJ_T0001624.1 MGP_NODShiLtJ_G0001539.1 mouse_genomes_project 5 75004589 75007000 + TEC TEC MGP_NODShiLtJ_T0004610.1 MGP_NODShiLtJ_G0003991.1 mouse_genomes_project 5 36845589 36847165 - Gm43791 antisense antisense MGP_NODShiLtJ_T0073308.1 MGP_NODShiLtJ_G0029763.1 mouse_genomes_project 5 131721362 131739549 + MGP_NODShiLtJ_P0073308 Coq5 protein_coding protein_coding MGP_NODShiLtJ_T0073309.1 MGP_NODShiLtJ_G0029763.1 mouse_genomes_project 5 131721391 131722635 + Coq5 protein_coding retained_intron MGP_NODShiLtJ_T0073310.1 MGP_NODShiLtJ_G0029763.1 mouse_genomes_project 5 131725712 131738885 + MGP_NODShiLtJ_P0073310 Coq5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073269.1 MGP_NODShiLtJ_G0029755.1 mouse_genomes_project 5 131419395 131514771 + MGP_NODShiLtJ_P0073269 Sppl3 protein_coding protein_coding MGP_NODShiLtJ_T0073270.1 MGP_NODShiLtJ_G0029755.1 mouse_genomes_project 5 131419404 131474634 + Sppl3 protein_coding processed_transcript MGP_NODShiLtJ_T0073271.1 MGP_NODShiLtJ_G0029755.1 mouse_genomes_project 5 131419840 131499946 + MGP_NODShiLtJ_P0073271 Sppl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073272.1 MGP_NODShiLtJ_G0029755.1 mouse_genomes_project 5 131489253 131491860 + Sppl3 protein_coding retained_intron MGP_NODShiLtJ_T0073273.1 MGP_NODShiLtJ_G0029755.1 mouse_genomes_project 5 131510737 131514237 + Sppl3 protein_coding retained_intron MGP_NODShiLtJ_T0008218.1 MGP_NODShiLtJ_G0006679.1 mouse_genomes_project 5 127798394 127804776 + Gm16019 lincRNA lincRNA MGP_NODShiLtJ_T0004694.1 MGP_NODShiLtJ_G0004054.1 mouse_genomes_project 5 115365799 115372156 - 4930458D05Rik antisense antisense MGP_NODShiLtJ_T0072844.1 MGP_NODShiLtJ_G0029670.1 mouse_genomes_project 5 124890192 124912815 - MGP_NODShiLtJ_P0072844 protein_coding protein_coding MGP_NODShiLtJ_T0099349.1 MGP_NODShiLtJ_G0037743.1 mouse_genomes_project 5 40727529 40727636 - Gm22779 snRNA snRNA MGP_NODShiLtJ_T0074464.1 MGP_NODShiLtJ_G0029959.1 mouse_genomes_project 5 152821250 152886461 - MGP_NODShiLtJ_P0074464 Clip2 protein_coding protein_coding MGP_NODShiLtJ_T0074465.1 MGP_NODShiLtJ_G0029959.1 mouse_genomes_project 5 152821254 152886461 - MGP_NODShiLtJ_P0074465 Clip2 protein_coding protein_coding MGP_NODShiLtJ_T0074466.1 MGP_NODShiLtJ_G0029959.1 mouse_genomes_project 5 152846390 152848862 - Clip2 protein_coding retained_intron MGP_NODShiLtJ_T0011722.1 MGP_NODShiLtJ_G0009833.1 mouse_genomes_project 5 137866704 137868655 + Oas1b polymorphic_pseudogene processed_transcript MGP_NODShiLtJ_T0011723.1 MGP_NODShiLtJ_G0009833.1 mouse_genomes_project 5 137866707 137878049 + MGP_NODShiLtJ_P0011723 Oas1b polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0071665.1 MGP_NODShiLtJ_G0029405.1 mouse_genomes_project 5 77560860 77586338 - MGP_NODShiLtJ_P0071665 Yipf7 protein_coding protein_coding MGP_NODShiLtJ_T0071666.1 MGP_NODShiLtJ_G0029405.1 mouse_genomes_project 5 77563499 77586279 - MGP_NODShiLtJ_P0071666 Yipf7 protein_coding protein_coding MGP_NODShiLtJ_T0071961.1 MGP_NODShiLtJ_G0029457.1 mouse_genomes_project 5 86180474 86190567 - MGP_NODShiLtJ_P0071961 Hopx protein_coding protein_coding MGP_NODShiLtJ_T0071962.1 MGP_NODShiLtJ_G0029457.1 mouse_genomes_project 5 86180475 86210434 - MGP_NODShiLtJ_P0071962 Hopx protein_coding protein_coding MGP_NODShiLtJ_T0071963.1 MGP_NODShiLtJ_G0029457.1 mouse_genomes_project 5 86180475 86190543 - MGP_NODShiLtJ_P0071963 Hopx protein_coding protein_coding MGP_NODShiLtJ_T0074951.1 MGP_NODShiLtJ_G0030051.1 mouse_genomes_project 5 156687063 156715692 - MGP_NODShiLtJ_P0074951 Cyp3a13 protein_coding protein_coding MGP_NODShiLtJ_T0001406.1 MGP_NODShiLtJ_G0001325.1 mouse_genomes_project 5 4715032 4716711 - TEC TEC MGP_NODShiLtJ_T0070934.1 MGP_NODShiLtJ_G0029280.1 mouse_genomes_project 5 36912150 36926381 - MGP_NODShiLtJ_P0070934 Lrpap1 protein_coding protein_coding MGP_NODShiLtJ_T0070935.1 MGP_NODShiLtJ_G0029280.1 mouse_genomes_project 5 36913718 36923127 - MGP_NODShiLtJ_P0070935 Lrpap1 protein_coding protein_coding MGP_NODShiLtJ_T0070936.1 MGP_NODShiLtJ_G0029280.1 mouse_genomes_project 5 36913944 36926304 - Lrpap1 protein_coding retained_intron MGP_NODShiLtJ_T0070937.1 MGP_NODShiLtJ_G0029280.1 mouse_genomes_project 5 36922740 36926311 - Lrpap1 protein_coding retained_intron MGP_NODShiLtJ_T0070938.1 MGP_NODShiLtJ_G0029280.1 mouse_genomes_project 5 36923121 36925155 - Lrpap1 protein_coding processed_transcript MGP_NODShiLtJ_T0099369.1 MGP_NODShiLtJ_G0037763.1 mouse_genomes_project 5 98193634 98193804 + Gm24524 snRNA snRNA MGP_NODShiLtJ_T0001426.1 MGP_NODShiLtJ_G0001345.1 mouse_genomes_project 5 13835837 13840389 + TEC TEC MGP_NODShiLtJ_T0008077.1 MGP_NODShiLtJ_G0006578.1 mouse_genomes_project 5 71733261 71779342 + Gm31363 lincRNA lincRNA MGP_NODShiLtJ_T0073984.1 MGP_NODShiLtJ_G0029879.1 mouse_genomes_project 5 141259906 141336547 + MGP_NODShiLtJ_P0073984 Kntc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073985.1 MGP_NODShiLtJ_G0029879.1 mouse_genomes_project 5 141259910 141264258 + Kntc1 protein_coding retained_intron MGP_NODShiLtJ_T0073986.1 MGP_NODShiLtJ_G0029879.1 mouse_genomes_project 5 141259920 141336602 + MGP_NODShiLtJ_P0073986 Kntc1 protein_coding protein_coding MGP_NODShiLtJ_T0073987.1 MGP_NODShiLtJ_G0029879.1 mouse_genomes_project 5 141284639 141291503 + Kntc1 protein_coding processed_transcript MGP_NODShiLtJ_T0073988.1 MGP_NODShiLtJ_G0029879.1 mouse_genomes_project 5 141293049 141293940 + MGP_NODShiLtJ_P0073988 Kntc1 protein_coding protein_coding MGP_NODShiLtJ_T0073989.1 MGP_NODShiLtJ_G0029879.1 mouse_genomes_project 5 141300332 141305110 + Kntc1 protein_coding retained_intron MGP_NODShiLtJ_T0073990.1 MGP_NODShiLtJ_G0029879.1 mouse_genomes_project 5 141326363 141336600 + MGP_NODShiLtJ_P0073990 Kntc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073991.1 MGP_NODShiLtJ_G0029879.1 mouse_genomes_project 5 141334557 141336601 + Kntc1 protein_coding retained_intron MGP_NODShiLtJ_T0010585.1 MGP_NODShiLtJ_G0008718.1 mouse_genomes_project 5 84908919 84909020 + Gm25374 miRNA miRNA MGP_NODShiLtJ_T0014993.1 MGP_NODShiLtJ_G0013101.1 mouse_genomes_project 5 123328449 123328676 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074186.1 MGP_NODShiLtJ_G0029914.1 mouse_genomes_project 5 143107597 143157305 + MGP_NODShiLtJ_P0074186 Aacs protein_coding protein_coding MGP_NODShiLtJ_T0074187.1 MGP_NODShiLtJ_G0029914.1 mouse_genomes_project 5 143145677 143152632 + Aacs protein_coding retained_intron MGP_NODShiLtJ_T0074188.1 MGP_NODShiLtJ_G0029914.1 mouse_genomes_project 5 143149383 143151791 + Aacs protein_coding retained_intron MGP_NODShiLtJ_T0074189.1 MGP_NODShiLtJ_G0029914.1 mouse_genomes_project 5 143152593 143153096 + Aacs protein_coding processed_transcript MGP_NODShiLtJ_T0074190.1 MGP_NODShiLtJ_G0029914.1 mouse_genomes_project 5 143154091 143154889 + Aacs protein_coding processed_transcript MGP_NODShiLtJ_T0074191.1 MGP_NODShiLtJ_G0029914.1 mouse_genomes_project 5 143155137 143156250 + Aacs protein_coding processed_transcript MGP_NODShiLtJ_T0004638.1 MGP_NODShiLtJ_G0004011.1 mouse_genomes_project 5 56395955 56397204 + Gm43685 antisense antisense MGP_NODShiLtJ_T0008268.1 MGP_NODShiLtJ_G0006713.1 mouse_genomes_project 5 136526854 136536811 + Gm16063 lincRNA lincRNA MGP_NODShiLtJ_T0070957.1 MGP_NODShiLtJ_G0029286.1 mouse_genomes_project 5 37493284 37520503 - MGP_NODShiLtJ_P0070957 Htra3 protein_coding protein_coding MGP_NODShiLtJ_T0070958.1 MGP_NODShiLtJ_G0029286.1 mouse_genomes_project 5 37494269 37520251 - MGP_NODShiLtJ_P0070958 Htra3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070959.1 MGP_NODShiLtJ_G0029286.1 mouse_genomes_project 5 37502737 37520629 - MGP_NODShiLtJ_P0070959 Htra3 protein_coding protein_coding MGP_NODShiLtJ_T0070960.1 MGP_NODShiLtJ_G0029286.1 mouse_genomes_project 5 37509382 37512803 - MGP_NODShiLtJ_P0070960 Htra3 protein_coding protein_coding MGP_NODShiLtJ_T0070961.1 MGP_NODShiLtJ_G0029286.1 mouse_genomes_project 5 37519539 37520619 - Htra3 protein_coding retained_intron MGP_NODShiLtJ_T0001405.1 MGP_NODShiLtJ_G0001324.1 mouse_genomes_project 5 4687086 4689495 - TEC TEC MGP_NODShiLtJ_T0010632.1 MGP_NODShiLtJ_G0008765.1 mouse_genomes_project 5 160343005 160343086 + Gm44385 miRNA miRNA MGP_NODShiLtJ_T0099409.1 MGP_NODShiLtJ_G0037803.1 mouse_genomes_project 5 171093354 171093455 - Gm23641 snRNA snRNA MGP_NODShiLtJ_T0010579.1 MGP_NODShiLtJ_G0008712.1 mouse_genomes_project 5 71946101 71946218 - Gm25306 miRNA miRNA MGP_NODShiLtJ_T0018011.1 MGP_NODShiLtJ_G0015469.1 mouse_genomes_project 5 82908083 82908662 + Usp46os2 processed_transcript retained_intron MGP_NODShiLtJ_T0018012.1 MGP_NODShiLtJ_G0015469.1 mouse_genomes_project 5 82908084 82908662 + Usp46os2 processed_transcript processed_transcript MGP_NODShiLtJ_T0018013.1 MGP_NODShiLtJ_G0015469.1 mouse_genomes_project 5 82908089 82917841 + Usp46os2 processed_transcript antisense MGP_NODShiLtJ_T0073587.1 MGP_NODShiLtJ_G0029823.1 mouse_genomes_project 5 138382123 138387672 + MGP_NODShiLtJ_P0073587 protein_coding protein_coding MGP_NODShiLtJ_T0073588.1 MGP_NODShiLtJ_G0029823.1 mouse_genomes_project 5 138382188 138382902 + protein_coding retained_intron MGP_NODShiLtJ_T0073589.1 MGP_NODShiLtJ_G0029823.1 mouse_genomes_project 5 138385042 138385789 + protein_coding retained_intron MGP_NODShiLtJ_T0073590.1 MGP_NODShiLtJ_G0029823.1 mouse_genomes_project 5 138385128 138387396 + MGP_NODShiLtJ_P0073590 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073591.1 MGP_NODShiLtJ_G0029823.1 mouse_genomes_project 5 138385481 138386960 + protein_coding retained_intron MGP_NODShiLtJ_T0073592.1 MGP_NODShiLtJ_G0029823.1 mouse_genomes_project 5 138386600 138387397 + protein_coding retained_intron MGP_NODShiLtJ_T0014836.1 MGP_NODShiLtJ_G0012944.1 mouse_genomes_project 5 40504461 40504665 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071712.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81215229 81254625 - MGP_NODShiLtJ_P0071712 Nfxl1 protein_coding protein_coding MGP_NODShiLtJ_T0071713.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81215232 81254586 - MGP_NODShiLtJ_P0071713 Nfxl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071714.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81215443 81218579 - Nfxl1 protein_coding retained_intron MGP_NODShiLtJ_T0071715.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81218134 81223519 - Nfxl1 protein_coding retained_intron MGP_NODShiLtJ_T0071716.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81223059 81226001 - Nfxl1 protein_coding retained_intron MGP_NODShiLtJ_T0071717.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81241452 81254540 - MGP_NODShiLtJ_P0071717 Nfxl1 protein_coding protein_coding MGP_NODShiLtJ_T0071718.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81245169 81254353 - Nfxl1 protein_coding retained_intron MGP_NODShiLtJ_T0071719.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81245171 81254589 - Nfxl1 protein_coding retained_intron MGP_NODShiLtJ_T0071720.1 MGP_NODShiLtJ_G0029415.1 mouse_genomes_project 5 81250399 81254564 - Nfxl1 protein_coding retained_intron MGP_NODShiLtJ_T0004580.1 MGP_NODShiLtJ_G0003966.1 mouse_genomes_project 5 19304060 19333336 - 4921504A21Rik antisense antisense MGP_NODShiLtJ_T0004581.1 MGP_NODShiLtJ_G0003966.1 mouse_genomes_project 5 19304985 19332949 - 4921504A21Rik antisense antisense MGP_NODShiLtJ_T0071789.1 MGP_NODShiLtJ_G0029427.1 mouse_genomes_project 5 82207816 82267920 + MGP_NODShiLtJ_P0071789 Cwh43 protein_coding protein_coding MGP_NODShiLtJ_T0071790.1 MGP_NODShiLtJ_G0029427.1 mouse_genomes_project 5 82207968 82267930 + MGP_NODShiLtJ_P0071790 Cwh43 protein_coding protein_coding MGP_NODShiLtJ_T0071791.1 MGP_NODShiLtJ_G0029427.1 mouse_genomes_project 5 82208068 82267777 + MGP_NODShiLtJ_P0071791 Cwh43 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0071792.1 MGP_NODShiLtJ_G0029427.1 mouse_genomes_project 5 82239765 82243923 + Cwh43 protein_coding retained_intron MGP_NODShiLtJ_T0074220.1 MGP_NODShiLtJ_G0029922.1 mouse_genomes_project 5 146639387 146706761 - MGP_NODShiLtJ_P0074220 Rimbp2 protein_coding protein_coding MGP_NODShiLtJ_T0074221.1 MGP_NODShiLtJ_G0029922.1 mouse_genomes_project 5 146639391 146706714 - MGP_NODShiLtJ_P0074221 Rimbp2 protein_coding protein_coding MGP_NODShiLtJ_T0074222.1 MGP_NODShiLtJ_G0029922.1 mouse_genomes_project 5 146641996 146865130 - MGP_NODShiLtJ_P0074222 Rimbp2 protein_coding protein_coding MGP_NODShiLtJ_T0074223.1 MGP_NODShiLtJ_G0029922.1 mouse_genomes_project 5 146641996 146865279 - MGP_NODShiLtJ_P0074223 Rimbp2 protein_coding protein_coding MGP_NODShiLtJ_T0074224.1 MGP_NODShiLtJ_G0029922.1 mouse_genomes_project 5 146642277 146865403 - MGP_NODShiLtJ_P0074224 Rimbp2 protein_coding protein_coding MGP_NODShiLtJ_T0074225.1 MGP_NODShiLtJ_G0029922.1 mouse_genomes_project 5 146693074 146770248 - MGP_NODShiLtJ_P0074225 Rimbp2 protein_coding protein_coding MGP_NODShiLtJ_T0074226.1 MGP_NODShiLtJ_G0029922.1 mouse_genomes_project 5 146729017 146865108 - Rimbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0099376.1 MGP_NODShiLtJ_G0037770.1 mouse_genomes_project 5 110934177 110934372 + Gm24623 snRNA snRNA MGP_NODShiLtJ_T0001798.1 MGP_NODShiLtJ_G0001711.1 mouse_genomes_project 5 147489690 147490629 - TEC TEC MGP_NODShiLtJ_T0014928.1 MGP_NODShiLtJ_G0013036.1 mouse_genomes_project 5 89275760 89276871 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014900.1 MGP_NODShiLtJ_G0013008.1 mouse_genomes_project 5 75946502 75946827 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070791.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35698781 35872104 - MGP_NODShiLtJ_P0070791 Poln protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070792.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35698783 35705167 - Poln protein_coding processed_transcript MGP_NODShiLtJ_T0070793.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35698793 35755340 - Poln protein_coding processed_transcript MGP_NODShiLtJ_T0070794.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35698802 35906058 - MGP_NODShiLtJ_P0070794 Poln protein_coding protein_coding MGP_NODShiLtJ_T0070795.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35698802 35906058 - MGP_NODShiLtJ_P0070795 Poln protein_coding protein_coding MGP_NODShiLtJ_T0070796.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35698887 35906036 - MGP_NODShiLtJ_P0070796 Poln protein_coding protein_coding MGP_NODShiLtJ_T0070797.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35705957 35816859 - Poln protein_coding processed_transcript MGP_NODShiLtJ_T0070798.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35725151 35816799 - Poln protein_coding processed_transcript MGP_NODShiLtJ_T0070799.1 MGP_NODShiLtJ_G0029262.1 mouse_genomes_project 5 35811108 35816875 - Poln protein_coding retained_intron MGP_NODShiLtJ_T0070800.1 MGP_NODShiLtJ_G0029263.1 mouse_genomes_project 5 35886726 35906058 - Haus3 protein_coding retained_intron MGP_NODShiLtJ_T0070801.1 MGP_NODShiLtJ_G0029263.1 mouse_genomes_project 5 35888835 35906137 - MGP_NODShiLtJ_P0070801 Haus3 protein_coding protein_coding MGP_NODShiLtJ_T0070802.1 MGP_NODShiLtJ_G0029263.1 mouse_genomes_project 5 35904541 35906062 - Haus3 protein_coding processed_transcript MGP_NODShiLtJ_T0070803.1 MGP_NODShiLtJ_G0029263.1 mouse_genomes_project 5 35904633 35906113 - MGP_NODShiLtJ_P0070803 Haus3 protein_coding protein_coding MGP_NODShiLtJ_T0070804.1 MGP_NODShiLtJ_G0029263.1 mouse_genomes_project 5 35904846 35906043 - MGP_NODShiLtJ_P0070804 Haus3 protein_coding protein_coding MGP_NODShiLtJ_T0071327.1 MGP_NODShiLtJ_G0029350.1 mouse_genomes_project 5 56499103 56532414 - MGP_NODShiLtJ_P0071327 Sepsecs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071328.1 MGP_NODShiLtJ_G0029350.1 mouse_genomes_project 5 56499103 56532414 - MGP_NODShiLtJ_P0071328 Sepsecs protein_coding protein_coding MGP_NODShiLtJ_T0071329.1 MGP_NODShiLtJ_G0029350.1 mouse_genomes_project 5 56500192 56525003 - MGP_NODShiLtJ_P0071329 Sepsecs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071330.1 MGP_NODShiLtJ_G0029350.1 mouse_genomes_project 5 56505653 56507528 - Sepsecs protein_coding retained_intron MGP_NODShiLtJ_T0071331.1 MGP_NODShiLtJ_G0029350.1 mouse_genomes_project 5 56514966 56532321 - MGP_NODShiLtJ_P0071331 Sepsecs protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070287.1 MGP_NODShiLtJ_G0029182.1 mouse_genomes_project 5 31192243 31198866 + MGP_NODShiLtJ_P0070287 Il6 protein_coding protein_coding MGP_NODShiLtJ_T0070288.1 MGP_NODShiLtJ_G0029182.1 mouse_genomes_project 5 31192291 31198681 + MGP_NODShiLtJ_P0070288 Il6 protein_coding protein_coding MGP_NODShiLtJ_T0071676.1 MGP_NODShiLtJ_G0029407.1 mouse_genomes_project 5 77622120 77639821 - MGP_NODShiLtJ_P0071676 Gnpda2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071677.1 MGP_NODShiLtJ_G0029407.1 mouse_genomes_project 5 77624013 77641337 - MGP_NODShiLtJ_P0071677 Gnpda2 protein_coding protein_coding MGP_NODShiLtJ_T0071678.1 MGP_NODShiLtJ_G0029407.1 mouse_genomes_project 5 77624182 77639857 - MGP_NODShiLtJ_P0071678 Gnpda2 protein_coding protein_coding MGP_NODShiLtJ_T0071679.1 MGP_NODShiLtJ_G0029407.1 mouse_genomes_project 5 77624187 77641243 - Gnpda2 protein_coding retained_intron MGP_NODShiLtJ_T0071680.1 MGP_NODShiLtJ_G0029407.1 mouse_genomes_project 5 77624824 77641271 - MGP_NODShiLtJ_P0071680 Gnpda2 protein_coding protein_coding MGP_NODShiLtJ_T0071681.1 MGP_NODShiLtJ_G0029407.1 mouse_genomes_project 5 77625754 77641290 - MGP_NODShiLtJ_P0071681 Gnpda2 protein_coding protein_coding MGP_NODShiLtJ_T0071682.1 MGP_NODShiLtJ_G0029407.1 mouse_genomes_project 5 77634029 77641286 - MGP_NODShiLtJ_P0071682 Gnpda2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072982.1 MGP_NODShiLtJ_G0029698.1 mouse_genomes_project 5 126889255 127311222 + MGP_NODShiLtJ_P0072982 Ttc28 protein_coding protein_coding MGP_NODShiLtJ_T0072983.1 MGP_NODShiLtJ_G0029698.1 mouse_genomes_project 5 126889255 127311221 + MGP_NODShiLtJ_P0072983 Ttc28 protein_coding protein_coding MGP_NODShiLtJ_T0072984.1 MGP_NODShiLtJ_G0029698.1 mouse_genomes_project 5 126889274 126927323 + Ttc28 protein_coding processed_transcript MGP_NODShiLtJ_T0072985.1 MGP_NODShiLtJ_G0029698.1 mouse_genomes_project 5 127245085 127249005 + Ttc28 protein_coding retained_intron MGP_NODShiLtJ_T0072986.1 MGP_NODShiLtJ_G0029698.1 mouse_genomes_project 5 127252858 127258845 + Ttc28 protein_coding processed_transcript MGP_NODShiLtJ_T0072987.1 MGP_NODShiLtJ_G0029698.1 mouse_genomes_project 5 127255695 127286534 + Ttc28 protein_coding retained_intron MGP_NODShiLtJ_T0073787.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139914101 139983082 - MGP_NODShiLtJ_P0073787 Ift81 protein_coding protein_coding MGP_NODShiLtJ_T0073788.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139914105 139926584 - Ift81 protein_coding retained_intron MGP_NODShiLtJ_T0073789.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139934393 139939593 - Ift81 protein_coding processed_transcript MGP_NODShiLtJ_T0073790.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139956756 139970673 - MGP_NODShiLtJ_P0073790 Ift81 protein_coding protein_coding MGP_NODShiLtJ_T0073791.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139968091 139983070 - Ift81 protein_coding retained_intron MGP_NODShiLtJ_T0073792.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139968222 139983009 - MGP_NODShiLtJ_P0073792 Ift81 protein_coding protein_coding MGP_NODShiLtJ_T0073793.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139968257 139983065 - MGP_NODShiLtJ_P0073793 Ift81 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073794.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139973506 139975952 - Ift81 protein_coding retained_intron MGP_NODShiLtJ_T0073795.1 MGP_NODShiLtJ_G0029854.1 mouse_genomes_project 5 139975615 139983080 - MGP_NODShiLtJ_P0073795 Ift81 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004656.1 MGP_NODShiLtJ_G0004027.1 mouse_genomes_project 5 80303926 80329178 - Gm43477 antisense antisense MGP_NODShiLtJ_T0070713.1 MGP_NODShiLtJ_G0029250.1 mouse_genomes_project 5 35056096 35059339 - MGP_NODShiLtJ_P0070713 Nkx1-1 protein_coding protein_coding MGP_NODShiLtJ_T0073488.1 MGP_NODShiLtJ_G0029796.1 mouse_genomes_project 5 135030449 135051382 + MGP_NODShiLtJ_P0073488 2410131K14Rik protein_coding protein_coding MGP_NODShiLtJ_T0074298.1 MGP_NODShiLtJ_G0029936.1 mouse_genomes_project 5 147874565 147891461 + protein_coding retained_intron MGP_NODShiLtJ_T0074299.1 MGP_NODShiLtJ_G0029936.1 mouse_genomes_project 5 147874575 147906441 + MGP_NODShiLtJ_P0074299 protein_coding protein_coding MGP_NODShiLtJ_T0069812.1 MGP_NODShiLtJ_G0029091.1 mouse_genomes_project 5 6307975 6397939 + MGP_NODShiLtJ_P0069812 Abcb1a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069813.1 MGP_NODShiLtJ_G0029091.1 mouse_genomes_project 5 6308002 6397996 + MGP_NODShiLtJ_P0069813 Abcb1a protein_coding protein_coding MGP_NODShiLtJ_T0069814.1 MGP_NODShiLtJ_G0029091.1 mouse_genomes_project 5 6368332 6397989 + Abcb1a protein_coding retained_intron MGP_NODShiLtJ_T0069815.1 MGP_NODShiLtJ_G0029091.1 mouse_genomes_project 5 6368362 6371955 + Abcb1a protein_coding processed_transcript MGP_NODShiLtJ_T0001515.1 MGP_NODShiLtJ_G0001431.1 mouse_genomes_project 5 48628091 48631610 - TEC TEC MGP_NODShiLtJ_T0075515.1 MGP_NODShiLtJ_G0030171.1 mouse_genomes_project 5 165161223 165239623 - MGP_NODShiLtJ_P0075515 protein_coding protein_coding MGP_NODShiLtJ_T0071080.1 MGP_NODShiLtJ_G0029307.1 mouse_genomes_project 5 39767353 39771446 - MGP_NODShiLtJ_P0071080 Msx1 protein_coding protein_coding MGP_NODShiLtJ_T0071081.1 MGP_NODShiLtJ_G0029307.1 mouse_genomes_project 5 39769565 39771445 - Msx1 protein_coding retained_intron MGP_NODShiLtJ_T0001555.1 MGP_NODShiLtJ_G0001471.1 mouse_genomes_project 5 55702707 55706872 - TEC TEC MGP_NODShiLtJ_T0001801.1 MGP_NODShiLtJ_G0001714.1 mouse_genomes_project 5 147977831 147979692 + TEC TEC MGP_NODShiLtJ_T0008265.1 MGP_NODShiLtJ_G0006710.1 mouse_genomes_project 5 135982925 135991001 + 1700081H04Rik lincRNA lincRNA MGP_NODShiLtJ_T0014785.1 MGP_NODShiLtJ_G0012893.1 mouse_genomes_project 5 24932707 24933105 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014933.1 MGP_NODShiLtJ_G0013041.1 mouse_genomes_project 5 96684717 96685384 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001482.1 MGP_NODShiLtJ_G0001398.1 mouse_genomes_project 5 39995363 39995658 - TEC TEC MGP_NODShiLtJ_T0001697.1 MGP_NODShiLtJ_G0001611.1 mouse_genomes_project 5 117643486 117645966 - TEC TEC MGP_NODShiLtJ_T0070245.1 MGP_NODShiLtJ_G0029174.1 mouse_genomes_project 5 29509968 29520403 - MGP_NODShiLtJ_P0070245 Shh protein_coding protein_coding MGP_NODShiLtJ_T0015099.1 MGP_NODShiLtJ_G0013207.1 mouse_genomes_project 5 170102955 170103414 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001465.1 MGP_NODShiLtJ_G0001381.1 mouse_genomes_project 5 33849463 33851698 + TEC TEC MGP_NODShiLtJ_T0070330.1 MGP_NODShiLtJ_G0029191.1 mouse_genomes_project 5 31525267 31634100 - MGP_NODShiLtJ_P0070330 Otof protein_coding protein_coding MGP_NODShiLtJ_T0070331.1 MGP_NODShiLtJ_G0029191.1 mouse_genomes_project 5 31525267 31634070 - MGP_NODShiLtJ_P0070331 Otof protein_coding protein_coding MGP_NODShiLtJ_T0070332.1 MGP_NODShiLtJ_G0029191.1 mouse_genomes_project 5 31525273 31634100 - Otof protein_coding retained_intron MGP_NODShiLtJ_T0070333.1 MGP_NODShiLtJ_G0029191.1 mouse_genomes_project 5 31525500 31634027 - Otof protein_coding retained_intron MGP_NODShiLtJ_T0070334.1 MGP_NODShiLtJ_G0029191.1 mouse_genomes_project 5 31570870 31574023 - Otof protein_coding retained_intron MGP_NODShiLtJ_T0075080.1 MGP_NODShiLtJ_G0030079.1 mouse_genomes_project 5 158268899 158307207 + MGP_NODShiLtJ_P0075080 Dnaaf5 protein_coding protein_coding MGP_NODShiLtJ_T0075081.1 MGP_NODShiLtJ_G0030079.1 mouse_genomes_project 5 158286709 158298699 + Dnaaf5 protein_coding processed_transcript MGP_NODShiLtJ_T0073747.1 MGP_NODShiLtJ_G0029846.1 mouse_genomes_project 5 139637147 139673959 + MGP_NODShiLtJ_P0073747 Pptc7 protein_coding protein_coding MGP_NODShiLtJ_T0011479.1 MGP_NODShiLtJ_G0009612.1 mouse_genomes_project 5 24124572 24124902 - Gm25219 misc_RNA misc_RNA MGP_NODShiLtJ_T0014935.1 MGP_NODShiLtJ_G0013043.1 mouse_genomes_project 5 99252247 99268996 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014982.1 MGP_NODShiLtJ_G0013090.1 mouse_genomes_project 5 121036305 121036771 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073368.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132138162 132227973 - MGP_NODShiLtJ_P0073368 Ccdc64 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073369.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132138169 132139789 - Ccdc64 protein_coding retained_intron MGP_NODShiLtJ_T0073370.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132138169 132228104 - MGP_NODShiLtJ_P0073370 Ccdc64 protein_coding protein_coding MGP_NODShiLtJ_T0073371.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132138171 132142981 - MGP_NODShiLtJ_P0073371 Ccdc64 protein_coding protein_coding MGP_NODShiLtJ_T0073372.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132138174 132142976 - MGP_NODShiLtJ_P0073372 Ccdc64 protein_coding protein_coding MGP_NODShiLtJ_T0073373.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132139261 132142981 - MGP_NODShiLtJ_P0073373 Ccdc64 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073374.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132141813 132165171 - MGP_NODShiLtJ_P0073374 Ccdc64 protein_coding protein_coding MGP_NODShiLtJ_T0073375.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132152146 132165437 - Ccdc64 protein_coding retained_intron MGP_NODShiLtJ_T0073376.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132162112 132213042 - Ccdc64 protein_coding processed_transcript MGP_NODShiLtJ_T0073377.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132165091 132227850 - MGP_NODShiLtJ_P0073377 Ccdc64 protein_coding protein_coding MGP_NODShiLtJ_T0073378.1 MGP_NODShiLtJ_G0029776.1 mouse_genomes_project 5 132220946 132227911 - Ccdc64 protein_coding retained_intron MGP_NODShiLtJ_T0010633.1 MGP_NODShiLtJ_G0008766.1 mouse_genomes_project 5 160396736 160396815 + Gm26113 miRNA miRNA MGP_NODShiLtJ_T0073727.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139501037 139521372 + MGP_NODShiLtJ_P0073727 protein_coding protein_coding MGP_NODShiLtJ_T0073728.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139501115 139521372 + MGP_NODShiLtJ_P0073728 protein_coding protein_coding MGP_NODShiLtJ_T0073729.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139501115 139521368 + MGP_NODShiLtJ_P0073729 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073730.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139501115 139521372 + MGP_NODShiLtJ_P0073730 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073731.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139501352 139521195 + MGP_NODShiLtJ_P0073731 protein_coding protein_coding MGP_NODShiLtJ_T0073732.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139501716 139513282 + protein_coding retained_intron MGP_NODShiLtJ_T0073733.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139512482 139521364 + MGP_NODShiLtJ_P0073733 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073734.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139515153 139517257 + protein_coding retained_intron MGP_NODShiLtJ_T0073735.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139516333 139521364 + MGP_NODShiLtJ_P0073735 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073736.1 MGP_NODShiLtJ_G0029843.1 mouse_genomes_project 5 139517141 139519623 + MGP_NODShiLtJ_P0073736 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070340.1 MGP_NODShiLtJ_G0029194.1 mouse_genomes_project 5 31770643 31808528 + MGP_NODShiLtJ_P0070340 Kcnk3 protein_coding protein_coding MGP_NODShiLtJ_T0070341.1 MGP_NODShiLtJ_G0029194.1 mouse_genomes_project 5 31804527 31805387 + Kcnk3 protein_coding processed_transcript MGP_NODShiLtJ_T0001619.1 MGP_NODShiLtJ_G0001534.1 mouse_genomes_project 5 74223049 74225569 + TEC TEC MGP_NODShiLtJ_T0014853.1 MGP_NODShiLtJ_G0012961.1 mouse_genomes_project 5 52938647 52938960 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072653.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121827902 121891898 - MGP_NODShiLtJ_P0072653 Zfp644 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072654.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121827908 121911672 - MGP_NODShiLtJ_P0072654 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072655.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121827909 121912527 - MGP_NODShiLtJ_P0072655 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072656.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121827911 121912294 - MGP_NODShiLtJ_P0072656 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072657.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121828240 121835603 - Zfp644 protein_coding processed_transcript MGP_NODShiLtJ_T0072658.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121829186 121912502 - Zfp644 protein_coding processed_transcript MGP_NODShiLtJ_T0072659.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121848062 121912523 - MGP_NODShiLtJ_P0072659 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072660.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121849073 121912261 - MGP_NODShiLtJ_P0072660 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072661.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121849324 121881658 - MGP_NODShiLtJ_P0072661 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072662.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121849492 121912347 - MGP_NODShiLtJ_P0072662 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072663.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121849539 121912261 - MGP_NODShiLtJ_P0072663 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072664.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121849682 121912347 - MGP_NODShiLtJ_P0072664 Zfp644 protein_coding protein_coding MGP_NODShiLtJ_T0072665.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121904458 121910718 - Zfp644 protein_coding retained_intron MGP_NODShiLtJ_T0072666.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121905507 121911863 - Zfp644 protein_coding retained_intron MGP_NODShiLtJ_T0072667.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121906278 121912243 - Zfp644 protein_coding processed_transcript MGP_NODShiLtJ_T0072668.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121906291 121912241 - Zfp644 protein_coding processed_transcript MGP_NODShiLtJ_T0072669.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121910749 121912984 - Zfp644 protein_coding processed_transcript MGP_NODShiLtJ_T0072670.1 MGP_NODShiLtJ_G0029632.1 mouse_genomes_project 5 121911054 121911709 - Zfp644 protein_coding processed_transcript MGP_NODShiLtJ_T0015063.1 MGP_NODShiLtJ_G0013171.1 mouse_genomes_project 5 159161574 159162066 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072428.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114374174 114399608 - MGP_NODShiLtJ_P0072428 Hnrnpd protein_coding protein_coding MGP_NODShiLtJ_T0072429.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114380002 114399607 - MGP_NODShiLtJ_P0072429 Hnrnpd protein_coding protein_coding MGP_NODShiLtJ_T0072430.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114380402 114399587 - MGP_NODShiLtJ_P0072430 Hnrnpd protein_coding protein_coding MGP_NODShiLtJ_T0072431.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114380406 114399605 - MGP_NODShiLtJ_P0072431 Hnrnpd protein_coding protein_coding MGP_NODShiLtJ_T0072432.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114380407 114395943 - MGP_NODShiLtJ_P0072432 Hnrnpd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072433.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114380555 114385579 - MGP_NODShiLtJ_P0072433 Hnrnpd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072434.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114380572 114384155 - MGP_NODShiLtJ_P0072434 Hnrnpd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072435.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114381687 114399294 - MGP_NODShiLtJ_P0072435 Hnrnpd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072436.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114384147 114385792 - Hnrnpd protein_coding retained_intron MGP_NODShiLtJ_T0072437.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114385431 114399604 - MGP_NODShiLtJ_P0072437 Hnrnpd protein_coding protein_coding MGP_NODShiLtJ_T0072438.1 MGP_NODShiLtJ_G0029581.1 mouse_genomes_project 5 114386712 114399529 - MGP_NODShiLtJ_P0072438 Hnrnpd protein_coding protein_coding MGP_NODShiLtJ_T0100618.1 MGP_NODShiLtJ_G0039012.1 mouse_genomes_project 5 73227659 73227853 + Gm24346 snoRNA snoRNA MGP_NODShiLtJ_T0075541.1 MGP_NODShiLtJ_G0030183.1 mouse_genomes_project 5 166261512 166335879 + MGP_NODShiLtJ_P0075541 Cdk8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075542.1 MGP_NODShiLtJ_G0030183.1 mouse_genomes_project 5 166261570 166325758 + MGP_NODShiLtJ_P0075542 Cdk8 protein_coding protein_coding MGP_NODShiLtJ_T0075543.1 MGP_NODShiLtJ_G0030183.1 mouse_genomes_project 5 166261667 166303753 + MGP_NODShiLtJ_P0075543 Cdk8 protein_coding protein_coding MGP_NODShiLtJ_T0075544.1 MGP_NODShiLtJ_G0030183.1 mouse_genomes_project 5 166261975 166335882 + MGP_NODShiLtJ_P0075544 Cdk8 protein_coding protein_coding MGP_NODShiLtJ_T0075545.1 MGP_NODShiLtJ_G0030183.1 mouse_genomes_project 5 166289091 166291310 + Cdk8 protein_coding retained_intron MGP_NODShiLtJ_T0075546.1 MGP_NODShiLtJ_G0030183.1 mouse_genomes_project 5 166321350 166325182 + Cdk8 protein_coding processed_transcript MGP_NODShiLtJ_T0075547.1 MGP_NODShiLtJ_G0030183.1 mouse_genomes_project 5 166327923 166335824 + Cdk8 protein_coding retained_intron MGP_NODShiLtJ_T0075548.1 MGP_NODShiLtJ_G0030183.1 mouse_genomes_project 5 166329378 166332526 + Cdk8 protein_coding retained_intron MGP_NODShiLtJ_T0008378.1 MGP_NODShiLtJ_G0006789.1 mouse_genomes_project 5 169303581 169304997 + 8430423G03Rik lincRNA lincRNA MGP_NODShiLtJ_T0072832.1 MGP_NODShiLtJ_G0029665.1 mouse_genomes_project 5 124127459 124142614 + MGP_NODShiLtJ_P0072832 Fgfrl1 protein_coding protein_coding MGP_NODShiLtJ_T0072833.1 MGP_NODShiLtJ_G0029665.1 mouse_genomes_project 5 124133310 124142417 + MGP_NODShiLtJ_P0072833 Fgfrl1 protein_coding protein_coding MGP_NODShiLtJ_T0072834.1 MGP_NODShiLtJ_G0029665.1 mouse_genomes_project 5 124133348 124146002 + MGP_NODShiLtJ_P0072834 Fgfrl1 protein_coding protein_coding MGP_NODShiLtJ_T0072835.1 MGP_NODShiLtJ_G0029665.1 mouse_genomes_project 5 124133582 124145974 + MGP_NODShiLtJ_P0072835 Fgfrl1 protein_coding protein_coding MGP_NODShiLtJ_T0072836.1 MGP_NODShiLtJ_G0029665.1 mouse_genomes_project 5 124144151 124144950 + Fgfrl1 protein_coding retained_intron MGP_NODShiLtJ_T0001440.1 MGP_NODShiLtJ_G0001359.1 mouse_genomes_project 5 24454269 24455160 + TEC TEC MGP_NODShiLtJ_T0015048.1 MGP_NODShiLtJ_G0013156.1 mouse_genomes_project 5 155509477 155509873 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101946.1 MGP_NODShiLtJ_G0040114.1 mouse_genomes_project 5 63919898 63922523 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0072353.1 MGP_NODShiLtJ_G0029562.1 mouse_genomes_project 5 106530894 106539870 + MGP_NODShiLtJ_P0072353 Ccng2 protein_coding protein_coding MGP_NODShiLtJ_T0072354.1 MGP_NODShiLtJ_G0029562.1 mouse_genomes_project 5 106531226 106532094 + Ccng2 protein_coding processed_transcript MGP_NODShiLtJ_T0072355.1 MGP_NODShiLtJ_G0029562.1 mouse_genomes_project 5 106531238 106533355 + Ccng2 protein_coding processed_transcript MGP_NODShiLtJ_T0072356.1 MGP_NODShiLtJ_G0029562.1 mouse_genomes_project 5 106531276 106539864 + Ccng2 protein_coding retained_intron MGP_NODShiLtJ_T0072357.1 MGP_NODShiLtJ_G0029562.1 mouse_genomes_project 5 106531951 106539863 + MGP_NODShiLtJ_P0072357 Ccng2 protein_coding protein_coding MGP_NODShiLtJ_T0072358.1 MGP_NODShiLtJ_G0029562.1 mouse_genomes_project 5 106532346 106537130 + Ccng2 protein_coding retained_intron MGP_NODShiLtJ_T0010595.1 MGP_NODShiLtJ_G0008728.1 mouse_genomes_project 5 118799466 118799527 + Mir5619 miRNA miRNA MGP_NODShiLtJ_T0010609.1 MGP_NODShiLtJ_G0008742.1 mouse_genomes_project 5 141028592 141028651 - Mir7647 miRNA miRNA MGP_NODShiLtJ_T0075421.1 MGP_NODShiLtJ_G0030152.1 mouse_genomes_project 5 163800392 163900454 - MGP_NODShiLtJ_P0075421 Baiap2l1 protein_coding protein_coding MGP_NODShiLtJ_T0075422.1 MGP_NODShiLtJ_G0030152.1 mouse_genomes_project 5 163817761 163824704 - Baiap2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0004712.1 MGP_NODShiLtJ_G0004065.1 mouse_genomes_project 5 126169184 126169778 - Gm43137 antisense antisense MGP_NODShiLtJ_T0004577.1 MGP_NODShiLtJ_G0003963.1 mouse_genomes_project 5 13719036 13742906 - Gm26918 antisense antisense MGP_NODShiLtJ_T0073952.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141204473 141227962 - MGP_NODShiLtJ_P0073952 Zcchc8 protein_coding protein_coding MGP_NODShiLtJ_T0073953.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141204481 141227906 - MGP_NODShiLtJ_P0073953 Zcchc8 protein_coding protein_coding MGP_NODShiLtJ_T0073954.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141205978 141209598 - Zcchc8 protein_coding retained_intron MGP_NODShiLtJ_T0073955.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141210655 141226377 - MGP_NODShiLtJ_P0073955 Zcchc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073956.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141210672 141214617 - Zcchc8 protein_coding retained_intron MGP_NODShiLtJ_T0073957.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141214422 141220939 - MGP_NODShiLtJ_P0073957 Zcchc8 protein_coding protein_coding MGP_NODShiLtJ_T0073958.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141215329 141227685 - MGP_NODShiLtJ_P0073958 Zcchc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073959.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141216874 141227724 - MGP_NODShiLtJ_P0073959 Zcchc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073960.1 MGP_NODShiLtJ_G0029877.1 mouse_genomes_project 5 141220947 141227636 - MGP_NODShiLtJ_P0073960 Zcchc8 protein_coding protein_coding MGP_NODShiLtJ_T0069760.1 MGP_NODShiLtJ_G0029083.1 mouse_genomes_project 5 5611200 5633755 + MGP_NODShiLtJ_P0069760 Sri protein_coding protein_coding MGP_NODShiLtJ_T0069761.1 MGP_NODShiLtJ_G0029083.1 mouse_genomes_project 5 5621468 5633489 + MGP_NODShiLtJ_P0069761 Sri protein_coding protein_coding MGP_NODShiLtJ_T0069762.1 MGP_NODShiLtJ_G0029083.1 mouse_genomes_project 5 5621499 5622800 + Sri protein_coding retained_intron MGP_NODShiLtJ_T0069763.1 MGP_NODShiLtJ_G0029083.1 mouse_genomes_project 5 5621503 5624658 + Sri protein_coding retained_intron MGP_NODShiLtJ_T0069764.1 MGP_NODShiLtJ_G0029083.1 mouse_genomes_project 5 5621549 5629547 + Sri protein_coding retained_intron MGP_NODShiLtJ_T0069765.1 MGP_NODShiLtJ_G0029083.1 mouse_genomes_project 5 5624278 5632091 + Sri protein_coding retained_intron MGP_NODShiLtJ_T0069766.1 MGP_NODShiLtJ_G0029083.1 mouse_genomes_project 5 5626212 5627418 + Sri protein_coding retained_intron MGP_NODShiLtJ_T0098407.1 MGP_NODShiLtJ_G0036812.1 mouse_genomes_project 5 126145396 126146104 + Gm43138 sense_intronic sense_intronic MGP_NODShiLtJ_T0001709.1 MGP_NODShiLtJ_G0001623.1 mouse_genomes_project 5 122967325 122968322 + TEC TEC MGP_NODShiLtJ_T0100611.1 MGP_NODShiLtJ_G0039005.1 mouse_genomes_project 5 62212205 62212333 - Gm23015 snoRNA snoRNA MGP_NODShiLtJ_T0001684.1 MGP_NODShiLtJ_G0001598.1 mouse_genomes_project 5 110983646 110984131 + TEC TEC MGP_NODShiLtJ_T0073532.1 MGP_NODShiLtJ_G0029806.1 mouse_genomes_project 5 137516237 137580149 - MGP_NODShiLtJ_P0073532 Tpcn1 protein_coding protein_coding MGP_NODShiLtJ_T0073533.1 MGP_NODShiLtJ_G0029806.1 mouse_genomes_project 5 137530552 137580088 - Tpcn1 protein_coding retained_intron MGP_NODShiLtJ_T0073534.1 MGP_NODShiLtJ_G0029806.1 mouse_genomes_project 5 137574415 137580070 - Tpcn1 protein_coding retained_intron MGP_NODShiLtJ_T0073535.1 MGP_NODShiLtJ_G0029806.1 mouse_genomes_project 5 137578632 137580075 - Tpcn1 protein_coding retained_intron MGP_NODShiLtJ_T0014857.1 MGP_NODShiLtJ_G0012965.1 mouse_genomes_project 5 54779411 54779892 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101954.1 MGP_NODShiLtJ_G0040122.1 mouse_genomes_project 5 99588976 99603702 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008017.1 MGP_NODShiLtJ_G0006532.1 mouse_genomes_project 5 34908101 34926078 - Gm20465 lincRNA lincRNA MGP_NODShiLtJ_T0008097.1 MGP_NODShiLtJ_G0006592.1 mouse_genomes_project 5 82978418 82980770 + Dancr lincRNA lincRNA MGP_NODShiLtJ_T0008098.1 MGP_NODShiLtJ_G0006592.1 mouse_genomes_project 5 82978418 82980769 + Dancr lincRNA lincRNA MGP_NODShiLtJ_T0101965.1 MGP_NODShiLtJ_G0040133.1 mouse_genomes_project 5 155622777 155626355 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001627.1 MGP_NODShiLtJ_G0001542.1 mouse_genomes_project 5 75381396 75383151 - TEC TEC MGP_NODShiLtJ_T0001811.1 MGP_NODShiLtJ_G0001724.1 mouse_genomes_project 5 149780907 149781607 - TEC TEC MGP_NODShiLtJ_T0074585.1 MGP_NODShiLtJ_G0029984.1 mouse_genomes_project 5 153812335 153832462 - MGP_NODShiLtJ_P0074585 Pom121 protein_coding protein_coding MGP_NODShiLtJ_T0001837.1 MGP_NODShiLtJ_G0001749.1 mouse_genomes_project 5 152813107 152817314 - TEC TEC MGP_NODShiLtJ_T0015078.1 MGP_NODShiLtJ_G0013186.1 mouse_genomes_project 5 164675604 164676052 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014922.1 MGP_NODShiLtJ_G0013030.1 mouse_genomes_project 5 86336784 86337357 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071895.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85575784 85618385 + MGP_NODShiLtJ_P0071895 Exoc1 protein_coding protein_coding MGP_NODShiLtJ_T0071896.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85575796 85618376 + MGP_NODShiLtJ_P0071896 Exoc1 protein_coding protein_coding MGP_NODShiLtJ_T0071897.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85575801 85586209 + Exoc1 protein_coding retained_intron MGP_NODShiLtJ_T0071898.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85575817 85610019 + Exoc1 protein_coding processed_transcript MGP_NODShiLtJ_T0071899.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85575831 85587582 + Exoc1 protein_coding retained_intron MGP_NODShiLtJ_T0071900.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85575831 85618378 + MGP_NODShiLtJ_P0071900 Exoc1 protein_coding protein_coding MGP_NODShiLtJ_T0071901.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85588664 85596215 + Exoc1 protein_coding retained_intron MGP_NODShiLtJ_T0071902.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85599356 85602128 + Exoc1 protein_coding retained_intron MGP_NODShiLtJ_T0071903.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85608589 85615322 + Exoc1 protein_coding retained_intron MGP_NODShiLtJ_T0071904.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85609452 85616142 + Exoc1 protein_coding retained_intron MGP_NODShiLtJ_T0071905.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85609590 85615086 + MGP_NODShiLtJ_P0071905 Exoc1 protein_coding protein_coding MGP_NODShiLtJ_T0071906.1 MGP_NODShiLtJ_G0029448.1 mouse_genomes_project 5 85616007 85618080 + Exoc1 protein_coding retained_intron MGP_NODShiLtJ_T0100645.1 MGP_NODShiLtJ_G0039039.1 mouse_genomes_project 5 166915476 166915547 + Gm25091 snoRNA snoRNA MGP_NODShiLtJ_T0074236.1 MGP_NODShiLtJ_G0029924.1 mouse_genomes_project 5 146939855 146944110 + MGP_NODShiLtJ_P0074236 Ran protein_coding protein_coding MGP_NODShiLtJ_T0074237.1 MGP_NODShiLtJ_G0029924.1 mouse_genomes_project 5 146939988 146940575 + Ran protein_coding processed_transcript MGP_NODShiLtJ_T0074238.1 MGP_NODShiLtJ_G0029924.1 mouse_genomes_project 5 146940058 146944110 + MGP_NODShiLtJ_P0074238 Ran protein_coding protein_coding MGP_NODShiLtJ_T0070732.1 MGP_NODShiLtJ_G0029254.1 mouse_genomes_project 5 35295179 35299785 - MGP_NODShiLtJ_P0070732 Tmem129 protein_coding protein_coding MGP_NODShiLtJ_T0070733.1 MGP_NODShiLtJ_G0029254.1 mouse_genomes_project 5 35295186 35299857 - Tmem129 protein_coding retained_intron MGP_NODShiLtJ_T0070734.1 MGP_NODShiLtJ_G0029254.1 mouse_genomes_project 5 35297515 35299814 - Tmem129 protein_coding retained_intron MGP_NODShiLtJ_T0014916.1 MGP_NODShiLtJ_G0013024.1 mouse_genomes_project 5 84305451 84306841 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011493.1 MGP_NODShiLtJ_G0009626.1 mouse_genomes_project 5 118303834 118304127 + Gm23085 misc_RNA misc_RNA MGP_NODShiLtJ_T0015088.1 MGP_NODShiLtJ_G0013196.1 mouse_genomes_project 5 166229547 166230021 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075533.1 MGP_NODShiLtJ_G0030182.1 mouse_genomes_project 5 166239561 166251948 - MGP_NODShiLtJ_P0075533 Rnf6 protein_coding protein_coding MGP_NODShiLtJ_T0075534.1 MGP_NODShiLtJ_G0030182.1 mouse_genomes_project 5 166239565 166251294 - MGP_NODShiLtJ_P0075534 Rnf6 protein_coding protein_coding MGP_NODShiLtJ_T0075535.1 MGP_NODShiLtJ_G0030182.1 mouse_genomes_project 5 166240325 166251369 - MGP_NODShiLtJ_P0075535 Rnf6 protein_coding protein_coding MGP_NODShiLtJ_T0075536.1 MGP_NODShiLtJ_G0030182.1 mouse_genomes_project 5 166241671 166248360 - MGP_NODShiLtJ_P0075536 Rnf6 protein_coding protein_coding MGP_NODShiLtJ_T0075537.1 MGP_NODShiLtJ_G0030182.1 mouse_genomes_project 5 166242044 166251811 - MGP_NODShiLtJ_P0075537 Rnf6 protein_coding protein_coding MGP_NODShiLtJ_T0075538.1 MGP_NODShiLtJ_G0030182.1 mouse_genomes_project 5 166242072 166251328 - MGP_NODShiLtJ_P0075538 Rnf6 protein_coding protein_coding MGP_NODShiLtJ_T0075539.1 MGP_NODShiLtJ_G0030182.1 mouse_genomes_project 5 166242221 166251341 - MGP_NODShiLtJ_P0075539 Rnf6 protein_coding protein_coding MGP_NODShiLtJ_T0075540.1 MGP_NODShiLtJ_G0030182.1 mouse_genomes_project 5 166248449 166251339 - Rnf6 protein_coding processed_transcript MGP_NODShiLtJ_T0004570.1 MGP_NODShiLtJ_G0003956.1 mouse_genomes_project 5 268964 270435 - Gm42435 antisense antisense MGP_NODShiLtJ_T0075748.1 MGP_NODShiLtJ_G0030219.1 mouse_genomes_project 5 171113944 171148218 - MGP_NODShiLtJ_P0075748 N4bp2l1 protein_coding protein_coding MGP_NODShiLtJ_T0075749.1 MGP_NODShiLtJ_G0030219.1 mouse_genomes_project 5 171113947 171119292 - MGP_NODShiLtJ_P0075749 N4bp2l1 protein_coding protein_coding MGP_NODShiLtJ_T0075750.1 MGP_NODShiLtJ_G0030219.1 mouse_genomes_project 5 171114965 171148155 - MGP_NODShiLtJ_P0075750 N4bp2l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075751.1 MGP_NODShiLtJ_G0030219.1 mouse_genomes_project 5 171116300 171150881 - MGP_NODShiLtJ_P0075751 N4bp2l1 protein_coding protein_coding MGP_NODShiLtJ_T0075752.1 MGP_NODShiLtJ_G0030219.1 mouse_genomes_project 5 171145444 171148221 - MGP_NODShiLtJ_P0075752 N4bp2l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075753.1 MGP_NODShiLtJ_G0030219.1 mouse_genomes_project 5 171145447 171148193 - MGP_NODShiLtJ_P0075753 N4bp2l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075754.1 MGP_NODShiLtJ_G0030219.1 mouse_genomes_project 5 171146135 171147462 - N4bp2l1 protein_coding retained_intron MGP_NODShiLtJ_T0101974.1 MGP_NODShiLtJ_G0040142.1 mouse_genomes_project 5 172285685 172291130 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015011.1 MGP_NODShiLtJ_G0013119.1 mouse_genomes_project 5 127028980 127029347 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071444.1 MGP_NODShiLtJ_G0029371.1 mouse_genomes_project 5 72276336 72284884 - MGP_NODShiLtJ_P0071444 Tlr1 protein_coding protein_coding MGP_NODShiLtJ_T0071445.1 MGP_NODShiLtJ_G0029371.1 mouse_genomes_project 5 72276337 72284114 - MGP_NODShiLtJ_P0071445 Tlr1 protein_coding protein_coding MGP_NODShiLtJ_T0071446.1 MGP_NODShiLtJ_G0029371.1 mouse_genomes_project 5 72284296 72284886 - Tlr1 protein_coding processed_transcript MGP_NODShiLtJ_T0099345.1 MGP_NODShiLtJ_G0037739.1 mouse_genomes_project 5 35886379 35886482 + Gm25918 snRNA snRNA MGP_NODShiLtJ_T0004572.1 MGP_NODShiLtJ_G0003958.1 mouse_genomes_project 5 401684 402418 - Gm43825 antisense antisense MGP_NODShiLtJ_T0004796.1 MGP_NODShiLtJ_G0004125.1 mouse_genomes_project 5 153098036 153189499 + Gm43278 antisense antisense MGP_NODShiLtJ_T0001502.1 MGP_NODShiLtJ_G0001418.1 mouse_genomes_project 5 47234850 47235753 - TEC TEC MGP_NODShiLtJ_T0014838.1 MGP_NODShiLtJ_G0012946.1 mouse_genomes_project 5 41426877 41427334 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014864.1 MGP_NODShiLtJ_G0012972.1 mouse_genomes_project 5 60172654 60173459 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001659.1 MGP_NODShiLtJ_G0001573.1 mouse_genomes_project 5 83960781 83963627 - TEC TEC MGP_NODShiLtJ_T0071364.1 MGP_NODShiLtJ_G0029356.1 mouse_genomes_project 5 57208125 57209634 + Smim20 protein_coding retained_intron MGP_NODShiLtJ_T0071365.1 MGP_NODShiLtJ_G0029356.1 mouse_genomes_project 5 57208180 57219581 + MGP_NODShiLtJ_P0071365 Smim20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071366.1 MGP_NODShiLtJ_G0029356.1 mouse_genomes_project 5 57208180 57219581 + MGP_NODShiLtJ_P0071366 Smim20 protein_coding protein_coding MGP_NODShiLtJ_T0071367.1 MGP_NODShiLtJ_G0029356.1 mouse_genomes_project 5 57208219 57219581 + MGP_NODShiLtJ_P0071367 Smim20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071368.1 MGP_NODShiLtJ_G0029356.1 mouse_genomes_project 5 57208232 57210308 + Smim20 protein_coding retained_intron MGP_NODShiLtJ_T0071369.1 MGP_NODShiLtJ_G0029356.1 mouse_genomes_project 5 57218158 57219067 + Smim20 protein_coding retained_intron MGP_NODShiLtJ_T0001425.1 MGP_NODShiLtJ_G0001344.1 mouse_genomes_project 5 13823802 13826609 + TEC TEC MGP_NODShiLtJ_T0014792.1 MGP_NODShiLtJ_G0012900.1 mouse_genomes_project 5 26378188 26378462 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008059.1 MGP_NODShiLtJ_G0006561.1 mouse_genomes_project 5 48809294 48814832 - 4930405L22Rik lincRNA lincRNA MGP_NODShiLtJ_T0070299.1 MGP_NODShiLtJ_G0029185.1 mouse_genomes_project 5 31306877 31320102 + MGP_NODShiLtJ_P0070299 Gareml protein_coding protein_coding MGP_NODShiLtJ_T0073514.1 MGP_NODShiLtJ_G0029801.1 mouse_genomes_project 5 137403265 137412678 + MGP_NODShiLtJ_P0073514 Lhx5 protein_coding protein_coding MGP_NODShiLtJ_T0075259.1 MGP_NODShiLtJ_G0030118.1 mouse_genomes_project 5 162061025 162063818 + Wipi2 protein_coding retained_intron MGP_NODShiLtJ_T0075260.1 MGP_NODShiLtJ_G0030118.1 mouse_genomes_project 5 162062869 162107953 + MGP_NODShiLtJ_P0075260 Wipi2 protein_coding protein_coding MGP_NODShiLtJ_T0075261.1 MGP_NODShiLtJ_G0030118.1 mouse_genomes_project 5 162062918 162100074 + Wipi2 protein_coding retained_intron MGP_NODShiLtJ_T0075262.1 MGP_NODShiLtJ_G0030118.1 mouse_genomes_project 5 162062920 162104852 + MGP_NODShiLtJ_P0075262 Wipi2 protein_coding protein_coding MGP_NODShiLtJ_T0075263.1 MGP_NODShiLtJ_G0030118.1 mouse_genomes_project 5 162099878 162102009 + Wipi2 protein_coding retained_intron MGP_NODShiLtJ_T0074954.1 MGP_NODShiLtJ_G0030053.1 mouse_genomes_project 5 156778348 156788699 + MGP_NODShiLtJ_P0074954 Azgp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074955.1 MGP_NODShiLtJ_G0030053.1 mouse_genomes_project 5 156778367 156788699 + MGP_NODShiLtJ_P0074955 Azgp1 protein_coding protein_coding MGP_NODShiLtJ_T0074956.1 MGP_NODShiLtJ_G0030053.1 mouse_genomes_project 5 156778396 156784075 + Azgp1 protein_coding retained_intron MGP_NODShiLtJ_T0070267.1 MGP_NODShiLtJ_G0029178.1 mouse_genomes_project 5 30585826 30593099 - MGP_NODShiLtJ_P0070267 Mnx1 protein_coding protein_coding MGP_NODShiLtJ_T0070268.1 MGP_NODShiLtJ_G0029178.1 mouse_genomes_project 5 30586053 30593099 - MGP_NODShiLtJ_P0070268 Mnx1 protein_coding protein_coding MGP_NODShiLtJ_T0014762.1 MGP_NODShiLtJ_G0012870.1 mouse_genomes_project 5 21667843 21668095 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071667.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77603169 77620743 + MGP_NODShiLtJ_P0071667 Guf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071668.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77603199 77614235 + Guf1 protein_coding retained_intron MGP_NODShiLtJ_T0071669.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77603199 77614395 + MGP_NODShiLtJ_P0071669 Guf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071670.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77603207 77622117 + MGP_NODShiLtJ_P0071670 Guf1 protein_coding protein_coding MGP_NODShiLtJ_T0071671.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77603234 77620744 + MGP_NODShiLtJ_P0071671 Guf1 protein_coding protein_coding MGP_NODShiLtJ_T0071672.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77603319 77615251 + MGP_NODShiLtJ_P0071672 Guf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071673.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77603340 77620788 + MGP_NODShiLtJ_P0071673 Guf1 protein_coding protein_coding MGP_NODShiLtJ_T0071674.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77614249 77624986 + Guf1 protein_coding retained_intron MGP_NODShiLtJ_T0071675.1 MGP_NODShiLtJ_G0029406.1 mouse_genomes_project 5 77618027 77620496 + Guf1 protein_coding retained_intron MGP_NODShiLtJ_T0071973.1 MGP_NODShiLtJ_G0029461.1 mouse_genomes_project 5 86437167 86483393 + MGP_NODShiLtJ_P0071973 Polr2b protein_coding protein_coding MGP_NODShiLtJ_T0071974.1 MGP_NODShiLtJ_G0029461.1 mouse_genomes_project 5 86437511 86440298 + Polr2b protein_coding retained_intron MGP_NODShiLtJ_T0071975.1 MGP_NODShiLtJ_G0029461.1 mouse_genomes_project 5 86458540 86459756 + Polr2b protein_coding retained_intron MGP_NODShiLtJ_T0071976.1 MGP_NODShiLtJ_G0029461.1 mouse_genomes_project 5 86474448 86477005 + Polr2b protein_coding retained_intron MGP_NODShiLtJ_T0099404.1 MGP_NODShiLtJ_G0037798.1 mouse_genomes_project 5 157342457 157342564 + Gm25525 snRNA snRNA MGP_NODShiLtJ_T0014820.1 MGP_NODShiLtJ_G0012928.1 mouse_genomes_project 5 34382023 34382309 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072912.1 MGP_NODShiLtJ_G0029687.1 mouse_genomes_project 5 126289892 126293036 - MGP_NODShiLtJ_P0072912 P2rx2 protein_coding protein_coding MGP_NODShiLtJ_T0072913.1 MGP_NODShiLtJ_G0029687.1 mouse_genomes_project 5 126289892 126293293 - MGP_NODShiLtJ_P0072913 P2rx2 protein_coding protein_coding MGP_NODShiLtJ_T0072914.1 MGP_NODShiLtJ_G0029687.1 mouse_genomes_project 5 126289892 126293036 - MGP_NODShiLtJ_P0072914 P2rx2 protein_coding protein_coding MGP_NODShiLtJ_T0072915.1 MGP_NODShiLtJ_G0029687.1 mouse_genomes_project 5 126289893 126293057 - MGP_NODShiLtJ_P0072915 P2rx2 protein_coding protein_coding MGP_NODShiLtJ_T0072916.1 MGP_NODShiLtJ_G0029687.1 mouse_genomes_project 5 126290050 126293230 - P2rx2 protein_coding retained_intron MGP_NODShiLtJ_T0072917.1 MGP_NODShiLtJ_G0029687.1 mouse_genomes_project 5 126290050 126293230 - MGP_NODShiLtJ_P0072917 P2rx2 protein_coding protein_coding MGP_NODShiLtJ_T0001547.1 MGP_NODShiLtJ_G0001463.1 mouse_genomes_project 5 53513986 53515121 - TEC TEC MGP_NODShiLtJ_T0001778.1 MGP_NODShiLtJ_G0001692.1 mouse_genomes_project 5 141055349 141055811 - TEC TEC MGP_NODShiLtJ_T0004791.1 MGP_NODShiLtJ_G0004121.1 mouse_genomes_project 5 150130350 150140361 + Gm42439 antisense antisense MGP_NODShiLtJ_T0018020.1 MGP_NODShiLtJ_G0015474.1 mouse_genomes_project 5 123012482 123015506 + A430072P03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018021.1 MGP_NODShiLtJ_G0015474.1 mouse_genomes_project 5 123014802 123017172 + A430072P03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0072721.1 MGP_NODShiLtJ_G0029644.1 mouse_genomes_project 5 122872865 122942012 + MGP_NODShiLtJ_P0072721 Rpap2 protein_coding protein_coding MGP_NODShiLtJ_T0072722.1 MGP_NODShiLtJ_G0029644.1 mouse_genomes_project 5 122872877 122923164 + MGP_NODShiLtJ_P0072722 Rpap2 protein_coding protein_coding MGP_NODShiLtJ_T0072723.1 MGP_NODShiLtJ_G0029644.1 mouse_genomes_project 5 122872880 122877096 + Rpap2 protein_coding processed_transcript MGP_NODShiLtJ_T0072724.1 MGP_NODShiLtJ_G0029644.1 mouse_genomes_project 5 122872896 122942016 + MGP_NODShiLtJ_P0072724 Rpap2 protein_coding protein_coding MGP_NODShiLtJ_T0072725.1 MGP_NODShiLtJ_G0029644.1 mouse_genomes_project 5 122872933 122923164 + MGP_NODShiLtJ_P0072725 Rpap2 protein_coding protein_coding MGP_NODShiLtJ_T0072726.1 MGP_NODShiLtJ_G0029644.1 mouse_genomes_project 5 122873120 122876924 + MGP_NODShiLtJ_P0072726 Rpap2 protein_coding protein_coding MGP_NODShiLtJ_T0072727.1 MGP_NODShiLtJ_G0029644.1 mouse_genomes_project 5 122873141 122883984 + MGP_NODShiLtJ_P0072727 Rpap2 protein_coding protein_coding MGP_NODShiLtJ_T0074963.1 MGP_NODShiLtJ_G0030057.1 mouse_genomes_project 5 156961758 156979059 + MGP_NODShiLtJ_P0074963 Zscan21 protein_coding protein_coding MGP_NODShiLtJ_T0074964.1 MGP_NODShiLtJ_G0030057.1 mouse_genomes_project 5 156961771 156979111 + MGP_NODShiLtJ_P0074964 Zscan21 protein_coding protein_coding MGP_NODShiLtJ_T0074965.1 MGP_NODShiLtJ_G0030057.1 mouse_genomes_project 5 156961792 156979060 + MGP_NODShiLtJ_P0074965 Zscan21 protein_coding protein_coding MGP_NODShiLtJ_T0074966.1 MGP_NODShiLtJ_G0030057.1 mouse_genomes_project 5 156961792 156979111 + MGP_NODShiLtJ_P0074966 Zscan21 protein_coding protein_coding MGP_NODShiLtJ_T0074967.1 MGP_NODShiLtJ_G0030057.1 mouse_genomes_project 5 156961835 156978093 + MGP_NODShiLtJ_P0074967 Zscan21 protein_coding protein_coding MGP_NODShiLtJ_T0074968.1 MGP_NODShiLtJ_G0030057.1 mouse_genomes_project 5 156961837 156969706 + MGP_NODShiLtJ_P0074968 Zscan21 protein_coding protein_coding MGP_NODShiLtJ_T0074969.1 MGP_NODShiLtJ_G0030057.1 mouse_genomes_project 5 156961896 156979062 + MGP_NODShiLtJ_P0074969 Zscan21 protein_coding protein_coding MGP_NODShiLtJ_T0001578.1 MGP_NODShiLtJ_G0001494.1 mouse_genomes_project 5 63325565 63327669 + TEC TEC MGP_NODShiLtJ_T0071558.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73494644 73579866 - MGP_NODShiLtJ_P0071558 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071559.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73494644 73659449 - MGP_NODShiLtJ_P0071559 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071560.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73494651 73560567 - MGP_NODShiLtJ_P0071560 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071561.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73494652 73634028 - MGP_NODShiLtJ_P0071561 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071562.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73496642 73633182 - MGP_NODShiLtJ_P0071562 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071563.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73496642 73633182 - MGP_NODShiLtJ_P0071563 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071564.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73497011 73560666 - MGP_NODShiLtJ_P0071564 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071565.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73503589 73633060 - Rbm47 protein_coding retained_intron MGP_NODShiLtJ_T0071566.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73504797 73532391 - MGP_NODShiLtJ_P0071566 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071567.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73505040 73561557 - Rbm47 protein_coding processed_transcript MGP_NODShiLtJ_T0071568.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73505232 73560551 - MGP_NODShiLtJ_P0071568 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071569.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73505252 73633426 - MGP_NODShiLtJ_P0071569 Rbm47 protein_coding protein_coding MGP_NODShiLtJ_T0071570.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73524095 73633892 - Rbm47 protein_coding processed_transcript MGP_NODShiLtJ_T0071571.1 MGP_NODShiLtJ_G0029390.1 mouse_genomes_project 5 73524210 73633886 - Rbm47 protein_coding processed_transcript MGP_NODShiLtJ_T0099366.1 MGP_NODShiLtJ_G0037760.1 mouse_genomes_project 5 91115891 91115994 + Gm22974 snRNA snRNA MGP_NODShiLtJ_T0001512.1 MGP_NODShiLtJ_G0001428.1 mouse_genomes_project 5 48481824 48482831 - TEC TEC MGP_NODShiLtJ_T0010577.1 MGP_NODShiLtJ_G0008710.1 mouse_genomes_project 5 71366998 71367076 - Gm23967 miRNA miRNA MGP_NODShiLtJ_T0004684.1 MGP_NODShiLtJ_G0004048.1 mouse_genomes_project 5 114008576 114009803 + 4930405H06Rik antisense antisense MGP_NODShiLtJ_T0001707.1 MGP_NODShiLtJ_G0001621.1 mouse_genomes_project 5 122379200 122382779 - TEC TEC MGP_NODShiLtJ_T0008085.1 MGP_NODShiLtJ_G0006583.1 mouse_genomes_project 5 71934294 71935994 + Gm42565 lincRNA lincRNA MGP_NODShiLtJ_T0001819.1 MGP_NODShiLtJ_G0001732.1 mouse_genomes_project 5 150151945 150155784 - TEC TEC MGP_NODShiLtJ_T0075102.1 MGP_NODShiLtJ_G0030081.1 mouse_genomes_project 5 158382461 158400184 + MGP_NODShiLtJ_P0075102 Get4 protein_coding protein_coding MGP_NODShiLtJ_T0075103.1 MGP_NODShiLtJ_G0030081.1 mouse_genomes_project 5 158382507 158397274 + MGP_NODShiLtJ_P0075103 Get4 protein_coding protein_coding MGP_NODShiLtJ_T0075104.1 MGP_NODShiLtJ_G0030081.1 mouse_genomes_project 5 158383648 158399462 + MGP_NODShiLtJ_P0075104 Get4 protein_coding protein_coding MGP_NODShiLtJ_T0075105.1 MGP_NODShiLtJ_G0030081.1 mouse_genomes_project 5 158396999 158397571 + Get4 protein_coding retained_intron MGP_NODShiLtJ_T0075106.1 MGP_NODShiLtJ_G0030081.1 mouse_genomes_project 5 158397063 158399835 + Get4 protein_coding retained_intron MGP_NODShiLtJ_T0073067.1 MGP_NODShiLtJ_G0029717.1 mouse_genomes_project 5 129436524 129448692 + MGP_NODShiLtJ_P0073067 Tmem211 protein_coding protein_coding MGP_NODShiLtJ_T0015002.1 MGP_NODShiLtJ_G0013110.1 mouse_genomes_project 5 125129982 125130566 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010616.1 MGP_NODShiLtJ_G0008749.1 mouse_genomes_project 5 153821688 153821769 - Mir7033 miRNA miRNA MGP_NODShiLtJ_T0101945.1 MGP_NODShiLtJ_G0040113.1 mouse_genomes_project 5 53804547 53979759 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001529.1 MGP_NODShiLtJ_G0001445.1 mouse_genomes_project 5 52253513 52256410 - TEC TEC MGP_NODShiLtJ_T0074828.1 MGP_NODShiLtJ_G0030029.1 mouse_genomes_project 5 156195511 156198308 - MGP_NODShiLtJ_P0074828 Epo protein_coding protein_coding MGP_NODShiLtJ_T0074829.1 MGP_NODShiLtJ_G0030029.1 mouse_genomes_project 5 156195511 156252084 - MGP_NODShiLtJ_P0074829 Epo protein_coding protein_coding MGP_NODShiLtJ_T0074830.1 MGP_NODShiLtJ_G0030029.1 mouse_genomes_project 5 156195517 156198308 - MGP_NODShiLtJ_P0074830 Epo protein_coding protein_coding MGP_NODShiLtJ_T0015013.1 MGP_NODShiLtJ_G0013121.1 mouse_genomes_project 5 130086458 130086826 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074217.1 MGP_NODShiLtJ_G0029921.1 mouse_genomes_project 5 146586961 146628935 + MGP_NODShiLtJ_P0074217 Piwil1 protein_coding protein_coding MGP_NODShiLtJ_T0074218.1 MGP_NODShiLtJ_G0029921.1 mouse_genomes_project 5 146617455 146637071 + MGP_NODShiLtJ_P0074218 Piwil1 protein_coding protein_coding MGP_NODShiLtJ_T0074219.1 MGP_NODShiLtJ_G0029921.1 mouse_genomes_project 5 146618771 146636186 + MGP_NODShiLtJ_P0074219 Piwil1 protein_coding protein_coding MGP_NODShiLtJ_T0010628.1 MGP_NODShiLtJ_G0008761.1 mouse_genomes_project 5 157694247 157694330 + Gm24082 miRNA miRNA MGP_NODShiLtJ_T0010621.1 MGP_NODShiLtJ_G0008754.1 mouse_genomes_project 5 155612188 155612297 + Mir702 miRNA miRNA MGP_NODShiLtJ_T0008359.1 MGP_NODShiLtJ_G0006772.1 mouse_genomes_project 5 162906838 162910607 - Gm42504 lincRNA lincRNA MGP_NODShiLtJ_T0098393.1 MGP_NODShiLtJ_G0036798.1 mouse_genomes_project 5 2458412 2461065 - Gm43727 sense_intronic sense_intronic MGP_NODShiLtJ_T0074541.1 MGP_NODShiLtJ_G0029974.1 mouse_genomes_project 5 153467492 153469147 + MGP_NODShiLtJ_P0074541 Dnajc30 protein_coding protein_coding MGP_NODShiLtJ_T0004710.1 MGP_NODShiLtJ_G0004063.1 mouse_genomes_project 5 124208574 124214020 + 1700047L14Rik antisense antisense MGP_NODShiLtJ_T0007994.1 MGP_NODShiLtJ_G0006517.1 mouse_genomes_project 5 25771121 25783328 + 1500035N22Rik lincRNA lincRNA MGP_NODShiLtJ_T0072051.1 MGP_NODShiLtJ_G0029476.1 mouse_genomes_project 5 98971047 99017351 - MGP_NODShiLtJ_P0072051 Tmprss11e protein_coding protein_coding MGP_NODShiLtJ_T0010572.1 MGP_NODShiLtJ_G0008705.1 mouse_genomes_project 5 38171102 38171161 + Mir7689 miRNA miRNA MGP_NODShiLtJ_T0001683.1 MGP_NODShiLtJ_G0001597.1 mouse_genomes_project 5 110980184 110980704 + TEC TEC MGP_NODShiLtJ_T0010560.1 MGP_NODShiLtJ_G0008693.1 mouse_genomes_project 5 12967004 12967109 - Gm24054 miRNA miRNA MGP_NODShiLtJ_T0008140.1 MGP_NODShiLtJ_G0006629.1 mouse_genomes_project 5 111046424 111047583 - Gm9484 lincRNA lincRNA MGP_NODShiLtJ_T0001727.1 MGP_NODShiLtJ_G0001641.1 mouse_genomes_project 5 129373240 129374161 - TEC TEC MGP_NODShiLtJ_T0072120.1 MGP_NODShiLtJ_G0029503.1 mouse_genomes_project 5 100856359 100857323 - MGP_NODShiLtJ_P0072120 Gm11116 protein_coding protein_coding MGP_NODShiLtJ_T0015094.1 MGP_NODShiLtJ_G0013202.1 mouse_genomes_project 5 168030052 168030546 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004690.1 MGP_NODShiLtJ_G0004051.1 mouse_genomes_project 5 114397077 114399528 + antisense antisense MGP_NODShiLtJ_T0071427.1 MGP_NODShiLtJ_G0029369.1 mouse_genomes_project 5 71423586 71441636 + MGP_NODShiLtJ_P0071427 Tbc1d1 protein_coding protein_coding MGP_NODShiLtJ_T0071428.1 MGP_NODShiLtJ_G0029369.1 mouse_genomes_project 5 71426713 71648016 + MGP_NODShiLtJ_P0071428 Tbc1d1 protein_coding protein_coding MGP_NODShiLtJ_T0071429.1 MGP_NODShiLtJ_G0029369.1 mouse_genomes_project 5 71427082 71648016 + MGP_NODShiLtJ_P0071429 Tbc1d1 protein_coding protein_coding MGP_NODShiLtJ_T0071430.1 MGP_NODShiLtJ_G0029369.1 mouse_genomes_project 5 71427473 71442377 + Tbc1d1 protein_coding retained_intron MGP_NODShiLtJ_T0071431.1 MGP_NODShiLtJ_G0029369.1 mouse_genomes_project 5 71427473 71648016 + MGP_NODShiLtJ_P0071431 Tbc1d1 protein_coding protein_coding MGP_NODShiLtJ_T0071432.1 MGP_NODShiLtJ_G0029369.1 mouse_genomes_project 5 71501779 71648016 + MGP_NODShiLtJ_P0071432 Tbc1d1 protein_coding protein_coding MGP_NODShiLtJ_T0071433.1 MGP_NODShiLtJ_G0029369.1 mouse_genomes_project 5 71558397 71567714 + MGP_NODShiLtJ_P0071433 Tbc1d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071434.1 MGP_NODShiLtJ_G0029369.1 mouse_genomes_project 5 71585546 71648011 + Tbc1d1 protein_coding processed_transcript MGP_NODShiLtJ_T0073864.1 MGP_NODShiLtJ_G0029862.1 mouse_genomes_project 5 140432633 140443957 - MGP_NODShiLtJ_P0073864 Morn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073865.1 MGP_NODShiLtJ_G0029862.1 mouse_genomes_project 5 140432653 140434570 - MGP_NODShiLtJ_P0073865 Morn3 protein_coding protein_coding MGP_NODShiLtJ_T0073866.1 MGP_NODShiLtJ_G0029862.1 mouse_genomes_project 5 140432726 140434578 - MGP_NODShiLtJ_P0073866 Morn3 protein_coding protein_coding MGP_NODShiLtJ_T0073867.1 MGP_NODShiLtJ_G0029862.1 mouse_genomes_project 5 140434148 140443716 - MGP_NODShiLtJ_P0073867 Morn3 protein_coding protein_coding MGP_NODShiLtJ_T0073868.1 MGP_NODShiLtJ_G0029862.1 mouse_genomes_project 5 140434170 140443946 - MGP_NODShiLtJ_P0073868 Morn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069937.1 MGP_NODShiLtJ_G0029113.1 mouse_genomes_project 5 21317127 21379532 - MGP_NODShiLtJ_P0069937 Rsbn1l protein_coding protein_coding MGP_NODShiLtJ_T0069938.1 MGP_NODShiLtJ_G0029113.1 mouse_genomes_project 5 21319357 21384103 - MGP_NODShiLtJ_P0069938 Rsbn1l protein_coding protein_coding MGP_NODShiLtJ_T0069939.1 MGP_NODShiLtJ_G0029113.1 mouse_genomes_project 5 21345109 21347398 - Rsbn1l protein_coding retained_intron MGP_NODShiLtJ_T0069940.1 MGP_NODShiLtJ_G0029113.1 mouse_genomes_project 5 21345140 21371207 - MGP_NODShiLtJ_P0069940 Rsbn1l protein_coding protein_coding MGP_NODShiLtJ_T0073992.1 MGP_NODShiLtJ_G0029880.1 mouse_genomes_project 5 141391180 141393107 - MGP_NODShiLtJ_P0073992 Hcar2 protein_coding protein_coding MGP_NODShiLtJ_T0073644.1 MGP_NODShiLtJ_G0029833.1 mouse_genomes_project 5 138779563 138809865 - MGP_NODShiLtJ_P0073644 Aldh2 protein_coding protein_coding MGP_NODShiLtJ_T0073645.1 MGP_NODShiLtJ_G0029833.1 mouse_genomes_project 5 138781414 138784743 - Aldh2 protein_coding retained_intron MGP_NODShiLtJ_T0073646.1 MGP_NODShiLtJ_G0029833.1 mouse_genomes_project 5 138781415 138793222 - MGP_NODShiLtJ_P0073646 Aldh2 protein_coding protein_coding MGP_NODShiLtJ_T0073647.1 MGP_NODShiLtJ_G0029833.1 mouse_genomes_project 5 138781493 138786394 - MGP_NODShiLtJ_P0073647 Aldh2 protein_coding protein_coding MGP_NODShiLtJ_T0073648.1 MGP_NODShiLtJ_G0029833.1 mouse_genomes_project 5 138783871 138809621 - MGP_NODShiLtJ_P0073648 Aldh2 protein_coding protein_coding MGP_NODShiLtJ_T0073649.1 MGP_NODShiLtJ_G0029833.1 mouse_genomes_project 5 138785027 138788683 - Aldh2 protein_coding retained_intron MGP_NODShiLtJ_T0073650.1 MGP_NODShiLtJ_G0029833.1 mouse_genomes_project 5 138790012 138809623 - MGP_NODShiLtJ_P0073650 Aldh2 protein_coding protein_coding MGP_NODShiLtJ_T0070095.1 MGP_NODShiLtJ_G0029143.1 mouse_genomes_project 5 25143548 25147991 + MGP_NODShiLtJ_P0070095 Asic3 protein_coding protein_coding MGP_NODShiLtJ_T0070096.1 MGP_NODShiLtJ_G0029143.1 mouse_genomes_project 5 25143607 25147991 + Asic3 protein_coding retained_intron MGP_NODShiLtJ_T0070097.1 MGP_NODShiLtJ_G0029143.1 mouse_genomes_project 5 25143868 25147903 + MGP_NODShiLtJ_P0070097 Asic3 protein_coding protein_coding MGP_NODShiLtJ_T0070098.1 MGP_NODShiLtJ_G0029143.1 mouse_genomes_project 5 25145896 25147991 + Asic3 protein_coding retained_intron MGP_NODShiLtJ_T0070099.1 MGP_NODShiLtJ_G0029143.1 mouse_genomes_project 5 25146733 25147992 + MGP_NODShiLtJ_P0070099 Asic3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001409.1 MGP_NODShiLtJ_G0001328.1 mouse_genomes_project 5 6318470 6322085 + TEC TEC MGP_NODShiLtJ_T0072389.1 MGP_NODShiLtJ_G0029568.1 mouse_genomes_project 5 111047907 111145478 + MGP_NODShiLtJ_P0072389 Bmp2k protein_coding protein_coding MGP_NODShiLtJ_T0072390.1 MGP_NODShiLtJ_G0029568.1 mouse_genomes_project 5 111047907 111122761 + MGP_NODShiLtJ_P0072390 Bmp2k protein_coding protein_coding MGP_NODShiLtJ_T0072321.1 MGP_NODShiLtJ_G0029555.1 mouse_genomes_project 5 105805757 105812319 + MGP_NODShiLtJ_P0072321 Stbd1 protein_coding protein_coding MGP_NODShiLtJ_T0072322.1 MGP_NODShiLtJ_G0029555.1 mouse_genomes_project 5 105805767 105814079 + MGP_NODShiLtJ_P0072322 Stbd1 protein_coding protein_coding MGP_NODShiLtJ_T0072323.1 MGP_NODShiLtJ_G0029555.1 mouse_genomes_project 5 105805784 105813794 + MGP_NODShiLtJ_P0072323 Stbd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015065.1 MGP_NODShiLtJ_G0013173.1 mouse_genomes_project 5 159824950 159825354 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008076.1 MGP_NODShiLtJ_G0006577.1 mouse_genomes_project 5 71681506 71685056 + Gm43837 lincRNA lincRNA MGP_NODShiLtJ_T0072409.1 MGP_NODShiLtJ_G0029576.1 mouse_genomes_project 5 112783669 112784719 + MGP_NODShiLtJ_P0072409 Gm11111 protein_coding protein_coding MGP_NODShiLtJ_T0073775.1 MGP_NODShiLtJ_G0029852.1 mouse_genomes_project 5 139775369 139800335 + MGP_NODShiLtJ_P0073775 Anapc7 protein_coding protein_coding MGP_NODShiLtJ_T0073776.1 MGP_NODShiLtJ_G0029852.1 mouse_genomes_project 5 139776121 139800335 + MGP_NODShiLtJ_P0073776 Anapc7 protein_coding protein_coding MGP_NODShiLtJ_T0073777.1 MGP_NODShiLtJ_G0029852.1 mouse_genomes_project 5 139776158 139798857 + MGP_NODShiLtJ_P0073777 Anapc7 protein_coding protein_coding MGP_NODShiLtJ_T0073778.1 MGP_NODShiLtJ_G0029852.1 mouse_genomes_project 5 139776256 139799874 + MGP_NODShiLtJ_P0073778 Anapc7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073779.1 MGP_NODShiLtJ_G0029852.1 mouse_genomes_project 5 139794803 139795915 + Anapc7 protein_coding retained_intron MGP_NODShiLtJ_T0073780.1 MGP_NODShiLtJ_G0029852.1 mouse_genomes_project 5 139795568 139797226 + Anapc7 protein_coding retained_intron MGP_NODShiLtJ_T0073781.1 MGP_NODShiLtJ_G0029852.1 mouse_genomes_project 5 139796797 139797205 + MGP_NODShiLtJ_P0073781 Anapc7 protein_coding protein_coding MGP_NODShiLtJ_T0073593.1 MGP_NODShiLtJ_G0029824.1 mouse_genomes_project 5 138400085 138567235 + MGP_NODShiLtJ_P0073593 Gm15800 protein_coding protein_coding MGP_NODShiLtJ_T0073594.1 MGP_NODShiLtJ_G0029824.1 mouse_genomes_project 5 138482270 138500468 + MGP_NODShiLtJ_P0073594 Gm15800 protein_coding protein_coding MGP_NODShiLtJ_T0073595.1 MGP_NODShiLtJ_G0029824.1 mouse_genomes_project 5 138482873 138501051 + Gm15800 protein_coding retained_intron MGP_NODShiLtJ_T0073596.1 MGP_NODShiLtJ_G0029824.1 mouse_genomes_project 5 138487297 138495466 + MGP_NODShiLtJ_P0073596 Gm15800 protein_coding protein_coding MGP_NODShiLtJ_T0073597.1 MGP_NODShiLtJ_G0029824.1 mouse_genomes_project 5 138501751 138520852 + MGP_NODShiLtJ_P0073597 Gm15800 protein_coding protein_coding MGP_NODShiLtJ_T0073598.1 MGP_NODShiLtJ_G0029824.1 mouse_genomes_project 5 138511776 138514678 + Gm15800 protein_coding processed_transcript MGP_NODShiLtJ_T0073599.1 MGP_NODShiLtJ_G0029824.1 mouse_genomes_project 5 138516051 138518808 + Gm15800 protein_coding processed_transcript MGP_NODShiLtJ_T0008247.1 MGP_NODShiLtJ_G0006696.1 mouse_genomes_project 5 131809811 131852834 + Gm13832 lincRNA lincRNA MGP_NODShiLtJ_T0008248.1 MGP_NODShiLtJ_G0006696.1 mouse_genomes_project 5 131809830 131882526 + Gm13832 lincRNA lincRNA MGP_NODShiLtJ_T0071229.1 MGP_NODShiLtJ_G0029333.1 mouse_genomes_project 5 47182056 47548631 - MGP_NODShiLtJ_P0071229 Ldb2 protein_coding protein_coding MGP_NODShiLtJ_T0071230.1 MGP_NODShiLtJ_G0029333.1 mouse_genomes_project 5 47182056 47548672 - MGP_NODShiLtJ_P0071230 Ldb2 protein_coding protein_coding MGP_NODShiLtJ_T0071231.1 MGP_NODShiLtJ_G0029333.1 mouse_genomes_project 5 47182056 47548611 - MGP_NODShiLtJ_P0071231 Ldb2 protein_coding protein_coding MGP_NODShiLtJ_T0071232.1 MGP_NODShiLtJ_G0029333.1 mouse_genomes_project 5 47182064 47548594 - MGP_NODShiLtJ_P0071232 Ldb2 protein_coding protein_coding MGP_NODShiLtJ_T0071233.1 MGP_NODShiLtJ_G0029333.1 mouse_genomes_project 5 47190044 47321200 - Ldb2 protein_coding processed_transcript MGP_NODShiLtJ_T0071234.1 MGP_NODShiLtJ_G0029333.1 mouse_genomes_project 5 47248697 47257404 - Ldb2 protein_coding processed_transcript MGP_NODShiLtJ_T0071235.1 MGP_NODShiLtJ_G0029333.1 mouse_genomes_project 5 47263909 47548644 - Ldb2 protein_coding retained_intron MGP_NODShiLtJ_T0008214.1 MGP_NODShiLtJ_G0006677.1 mouse_genomes_project 5 127635713 127636382 + Gm42489 lincRNA lincRNA MGP_NODShiLtJ_T0014897.1 MGP_NODShiLtJ_G0013005.1 mouse_genomes_project 5 74431716 74432227 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101967.1 MGP_NODShiLtJ_G0040135.1 mouse_genomes_project 5 161977009 161977520 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0074882.1 MGP_NODShiLtJ_G0030037.1 mouse_genomes_project 5 156339884 156356655 - MGP_NODShiLtJ_P0074882 Fbxo24 protein_coding protein_coding MGP_NODShiLtJ_T0074883.1 MGP_NODShiLtJ_G0030037.1 mouse_genomes_project 5 156339884 156352765 - MGP_NODShiLtJ_P0074883 Fbxo24 protein_coding protein_coding MGP_NODShiLtJ_T0074884.1 MGP_NODShiLtJ_G0030037.1 mouse_genomes_project 5 156339887 156356609 - MGP_NODShiLtJ_P0074884 Fbxo24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074184.1 MGP_NODShiLtJ_G0029913.1 mouse_genomes_project 5 143067053 143086535 + MGP_NODShiLtJ_P0074184 Bri3bp protein_coding protein_coding MGP_NODShiLtJ_T0074185.1 MGP_NODShiLtJ_G0029913.1 mouse_genomes_project 5 143067235 143080891 + MGP_NODShiLtJ_P0074185 Bri3bp protein_coding protein_coding MGP_NODShiLtJ_T0014843.1 MGP_NODShiLtJ_G0012951.1 mouse_genomes_project 5 44453958 44455234 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015037.1 MGP_NODShiLtJ_G0013145.1 mouse_genomes_project 5 143501413 143502202 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101164.1 MGP_NODShiLtJ_G0039490.1 mouse_genomes_project 5 135311977 135331499 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101165.1 MGP_NODShiLtJ_G0039490.1 mouse_genomes_project 5 135330838 135331316 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0001702.1 MGP_NODShiLtJ_G0001616.1 mouse_genomes_project 5 119219159 119220411 + TEC TEC MGP_NODShiLtJ_T0073449.1 MGP_NODShiLtJ_G0029788.1 mouse_genomes_project 5 134089808 134100406 - Rfc5 protein_coding retained_intron MGP_NODShiLtJ_T0073450.1 MGP_NODShiLtJ_G0029788.1 mouse_genomes_project 5 134089808 134100431 - MGP_NODShiLtJ_P0073450 Rfc5 protein_coding protein_coding MGP_NODShiLtJ_T0073451.1 MGP_NODShiLtJ_G0029788.1 mouse_genomes_project 5 134091000 134092235 - Rfc5 protein_coding retained_intron MGP_NODShiLtJ_T0073452.1 MGP_NODShiLtJ_G0029788.1 mouse_genomes_project 5 134091224 134091600 - Rfc5 protein_coding retained_intron MGP_NODShiLtJ_T0073453.1 MGP_NODShiLtJ_G0029788.1 mouse_genomes_project 5 134093099 134098215 - Rfc5 protein_coding retained_intron MGP_NODShiLtJ_T0073454.1 MGP_NODShiLtJ_G0029788.1 mouse_genomes_project 5 134097664 134100429 - MGP_NODShiLtJ_P0073454 Rfc5 protein_coding protein_coding MGP_NODShiLtJ_T0072261.1 MGP_NODShiLtJ_G0029545.1 mouse_genomes_project 5 105369877 105376027 - MGP_NODShiLtJ_P0072261 U90926 protein_coding protein_coding MGP_NODShiLtJ_T0072262.1 MGP_NODShiLtJ_G0029545.1 mouse_genomes_project 5 105369880 105376027 - MGP_NODShiLtJ_P0072262 U90926 protein_coding protein_coding MGP_NODShiLtJ_T0072263.1 MGP_NODShiLtJ_G0029545.1 mouse_genomes_project 5 105370098 105372335 - U90926 protein_coding retained_intron MGP_NODShiLtJ_T0072709.1 MGP_NODShiLtJ_G0029642.1 mouse_genomes_project 5 122814136 122827799 + MGP_NODShiLtJ_P0072709 1700028K03Rik protein_coding protein_coding MGP_NODShiLtJ_T0072710.1 MGP_NODShiLtJ_G0029642.1 mouse_genomes_project 5 122814147 122831693 + 1700028K03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0072711.1 MGP_NODShiLtJ_G0029642.1 mouse_genomes_project 5 122814164 122829568 + MGP_NODShiLtJ_P0072711 1700028K03Rik protein_coding protein_coding MGP_NODShiLtJ_T0072712.1 MGP_NODShiLtJ_G0029642.1 mouse_genomes_project 5 122814184 122829376 + 1700028K03Rik protein_coding retained_intron MGP_NODShiLtJ_T0075763.1 MGP_NODShiLtJ_G0030221.1 mouse_genomes_project 5 171232284 171379535 + MGP_NODShiLtJ_P0075763 Pds5b protein_coding protein_coding MGP_NODShiLtJ_T0075764.1 MGP_NODShiLtJ_G0030221.1 mouse_genomes_project 5 171232284 171380360 + MGP_NODShiLtJ_P0075764 Pds5b protein_coding protein_coding MGP_NODShiLtJ_T0075765.1 MGP_NODShiLtJ_G0030221.1 mouse_genomes_project 5 171232372 171380337 + MGP_NODShiLtJ_P0075765 Pds5b protein_coding protein_coding MGP_NODShiLtJ_T0075766.1 MGP_NODShiLtJ_G0030221.1 mouse_genomes_project 5 171315302 171316094 + Pds5b protein_coding retained_intron MGP_NODShiLtJ_T0075767.1 MGP_NODShiLtJ_G0030221.1 mouse_genomes_project 5 171324227 171368292 + MGP_NODShiLtJ_P0075767 Pds5b protein_coding protein_coding MGP_NODShiLtJ_T0075768.1 MGP_NODShiLtJ_G0030221.1 mouse_genomes_project 5 171327273 171338792 + Pds5b protein_coding processed_transcript MGP_NODShiLtJ_T0075769.1 MGP_NODShiLtJ_G0030221.1 mouse_genomes_project 5 171362878 171370581 + Pds5b protein_coding processed_transcript MGP_NODShiLtJ_T0075770.1 MGP_NODShiLtJ_G0030221.1 mouse_genomes_project 5 171374898 171380150 + Pds5b protein_coding retained_intron MGP_NODShiLtJ_T0010590.1 MGP_NODShiLtJ_G0008723.1 mouse_genomes_project 5 103816853 103816923 - Gm24322 miRNA miRNA MGP_NODShiLtJ_T0001757.1 MGP_NODShiLtJ_G0001671.1 mouse_genomes_project 5 137754678 137755951 + TEC TEC MGP_NODShiLtJ_T0014848.1 MGP_NODShiLtJ_G0012956.1 mouse_genomes_project 5 48469012 48469637 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073274.1 MGP_NODShiLtJ_G0029756.1 mouse_genomes_project 5 131513669 131514276 - MGP_NODShiLtJ_P0073274 Gm10401 protein_coding protein_coding MGP_NODShiLtJ_T0008030.1 MGP_NODShiLtJ_G0006540.1 mouse_genomes_project 5 39094328 39107787 + lincRNA lincRNA MGP_NODShiLtJ_T0008031.1 MGP_NODShiLtJ_G0006540.1 mouse_genomes_project 5 39098821 39106482 + lincRNA lincRNA MGP_NODShiLtJ_T0099346.1 MGP_NODShiLtJ_G0037740.1 mouse_genomes_project 5 36297206 36297311 + Gm22847 snRNA snRNA MGP_NODShiLtJ_T0075550.1 MGP_NODShiLtJ_G0030185.1 mouse_genomes_project 5 166636465 166638474 - Gpr12 protein_coding retained_intron MGP_NODShiLtJ_T0075551.1 MGP_NODShiLtJ_G0030185.1 mouse_genomes_project 5 166636467 166639309 - MGP_NODShiLtJ_P0075551 Gpr12 protein_coding protein_coding MGP_NODShiLtJ_T0075552.1 MGP_NODShiLtJ_G0030185.1 mouse_genomes_project 5 166636818 166638902 - MGP_NODShiLtJ_P0075552 Gpr12 protein_coding protein_coding MGP_NODShiLtJ_T0075553.1 MGP_NODShiLtJ_G0030185.1 mouse_genomes_project 5 166637540 166638889 - MGP_NODShiLtJ_P0075553 Gpr12 protein_coding protein_coding MGP_NODShiLtJ_T0075554.1 MGP_NODShiLtJ_G0030185.1 mouse_genomes_project 5 166637724 166638913 - MGP_NODShiLtJ_P0075554 Gpr12 protein_coding protein_coding MGP_NODShiLtJ_T0069941.1 MGP_NODShiLtJ_G0029114.1 mouse_genomes_project 5 21424996 21502574 - MGP_NODShiLtJ_P0069941 Ptpn12 protein_coding protein_coding MGP_NODShiLtJ_T0069942.1 MGP_NODShiLtJ_G0029114.1 mouse_genomes_project 5 21424997 21428851 - Ptpn12 protein_coding retained_intron MGP_NODShiLtJ_T0069943.1 MGP_NODShiLtJ_G0029114.1 mouse_genomes_project 5 21437704 21440726 - Ptpn12 protein_coding retained_intron MGP_NODShiLtJ_T0069944.1 MGP_NODShiLtJ_G0029114.1 mouse_genomes_project 5 21437878 21449859 - Ptpn12 protein_coding retained_intron MGP_NODShiLtJ_T0069945.1 MGP_NODShiLtJ_G0029114.1 mouse_genomes_project 5 21440602 21502416 - MGP_NODShiLtJ_P0069945 Ptpn12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069946.1 MGP_NODShiLtJ_G0029114.1 mouse_genomes_project 5 21444697 21502560 - MGP_NODShiLtJ_P0069946 Ptpn12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069947.1 MGP_NODShiLtJ_G0029114.1 mouse_genomes_project 5 21449696 21502388 - MGP_NODShiLtJ_P0069947 Ptpn12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072845.1 MGP_NODShiLtJ_G0029671.1 mouse_genomes_project 5 124892264 124904037 - MGP_NODShiLtJ_P0072845 protein_coding protein_coding MGP_NODShiLtJ_T0004706.1 MGP_NODShiLtJ_G0004059.1 mouse_genomes_project 5 120983194 120987406 - Lrrc8dos antisense antisense MGP_NODShiLtJ_T0001517.1 MGP_NODShiLtJ_G0001433.1 mouse_genomes_project 5 49429294 49430426 + TEC TEC MGP_NODShiLtJ_T0008166.1 MGP_NODShiLtJ_G0006647.1 mouse_genomes_project 5 116302258 116304646 + Gm43270 lincRNA lincRNA MGP_NODShiLtJ_T0001792.1 MGP_NODShiLtJ_G0001705.1 mouse_genomes_project 5 145422017 145422791 + TEC TEC MGP_NODShiLtJ_T0075567.1 MGP_NODShiLtJ_G0030189.1 mouse_genomes_project 5 167049410 167056368 + MGP_NODShiLtJ_P0075567 Gtf3a protein_coding protein_coding MGP_NODShiLtJ_T0075568.1 MGP_NODShiLtJ_G0030189.1 mouse_genomes_project 5 167049451 167056357 + Gtf3a protein_coding retained_intron MGP_NODShiLtJ_T0075569.1 MGP_NODShiLtJ_G0030189.1 mouse_genomes_project 5 167049458 167056360 + MGP_NODShiLtJ_P0075569 Gtf3a protein_coding protein_coding MGP_NODShiLtJ_T0075570.1 MGP_NODShiLtJ_G0030189.1 mouse_genomes_project 5 167050760 167056357 + Gtf3a protein_coding retained_intron MGP_NODShiLtJ_T0073408.1 MGP_NODShiLtJ_G0029779.1 mouse_genomes_project 5 132579361 132641272 - MGP_NODShiLtJ_P0073408 Tmem233 protein_coding protein_coding MGP_NODShiLtJ_T0074007.1 MGP_NODShiLtJ_G0029885.1 mouse_genomes_project 5 141511807 141545891 + MGP_NODShiLtJ_P0074007 Hip1r protein_coding protein_coding MGP_NODShiLtJ_T0074008.1 MGP_NODShiLtJ_G0029885.1 mouse_genomes_project 5 141519443 141529172 + MGP_NODShiLtJ_P0074008 Hip1r protein_coding protein_coding MGP_NODShiLtJ_T0074009.1 MGP_NODShiLtJ_G0029885.1 mouse_genomes_project 5 141533976 141537732 + MGP_NODShiLtJ_P0074009 Hip1r protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074010.1 MGP_NODShiLtJ_G0029885.1 mouse_genomes_project 5 141539742 141541340 + Hip1r protein_coding retained_intron MGP_NODShiLtJ_T0074011.1 MGP_NODShiLtJ_G0029885.1 mouse_genomes_project 5 141540118 141541995 + MGP_NODShiLtJ_P0074011 Hip1r protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074012.1 MGP_NODShiLtJ_G0029885.1 mouse_genomes_project 5 141540715 141542021 + Hip1r protein_coding retained_intron MGP_NODShiLtJ_T0074013.1 MGP_NODShiLtJ_G0029885.1 mouse_genomes_project 5 141540931 141542007 + Hip1r protein_coding retained_intron MGP_NODShiLtJ_T0014790.1 MGP_NODShiLtJ_G0012898.1 mouse_genomes_project 5 26238557 26238807 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071803.1 MGP_NODShiLtJ_G0029430.1 mouse_genomes_project 5 82465886 82480892 - MGP_NODShiLtJ_P0071803 Sgcb protein_coding protein_coding MGP_NODShiLtJ_T0071804.1 MGP_NODShiLtJ_G0029430.1 mouse_genomes_project 5 82477101 82477564 - Sgcb protein_coding retained_intron MGP_NODShiLtJ_T0099401.1 MGP_NODShiLtJ_G0037795.1 mouse_genomes_project 5 154380567 154380674 + Gm22450 snRNA snRNA MGP_NODShiLtJ_T0075008.1 MGP_NODShiLtJ_G0030065.1 mouse_genomes_project 5 157153649 157183415 + MGP_NODShiLtJ_P0075008 protein_coding protein_coding MGP_NODShiLtJ_T0075009.1 MGP_NODShiLtJ_G0030065.1 mouse_genomes_project 5 157172476 157203521 + MGP_NODShiLtJ_P0075009 protein_coding protein_coding MGP_NODShiLtJ_T0072213.1 MGP_NODShiLtJ_G0029532.1 mouse_genomes_project 5 103911597 103913472 + MGP_NODShiLtJ_P0072213 Cxcl1 protein_coding protein_coding MGP_NODShiLtJ_T0072214.1 MGP_NODShiLtJ_G0029532.1 mouse_genomes_project 5 103911599 103913470 + Cxcl1 protein_coding retained_intron MGP_NODShiLtJ_T0098058.1 MGP_NODShiLtJ_G0036470.1 mouse_genomes_project 5 169682161 169682267 - n-R5s180 rRNA rRNA MGP_NODShiLtJ_T0008297.1 MGP_NODShiLtJ_G0006731.1 mouse_genomes_project 5 142978118 142989828 + Gm42485 lincRNA lincRNA MGP_NODShiLtJ_T0001753.1 MGP_NODShiLtJ_G0001667.1 mouse_genomes_project 5 135865126 135867560 - TEC TEC MGP_NODShiLtJ_T0014786.1 MGP_NODShiLtJ_G0012894.1 mouse_genomes_project 5 24951211 24951866 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071468.1 MGP_NODShiLtJ_G0029377.1 mouse_genomes_project 5 72645029 72725248 - MGP_NODShiLtJ_P0071468 Rfc1 protein_coding protein_coding MGP_NODShiLtJ_T0071469.1 MGP_NODShiLtJ_G0029377.1 mouse_genomes_project 5 72645031 72725305 - MGP_NODShiLtJ_P0071469 Rfc1 protein_coding protein_coding MGP_NODShiLtJ_T0071470.1 MGP_NODShiLtJ_G0029377.1 mouse_genomes_project 5 72645031 72725354 - MGP_NODShiLtJ_P0071470 Rfc1 protein_coding protein_coding MGP_NODShiLtJ_T0071471.1 MGP_NODShiLtJ_G0029377.1 mouse_genomes_project 5 72645781 72725302 - MGP_NODShiLtJ_P0071471 Rfc1 protein_coding protein_coding MGP_NODShiLtJ_T0071472.1 MGP_NODShiLtJ_G0029377.1 mouse_genomes_project 5 72646255 72653253 - MGP_NODShiLtJ_P0071472 Rfc1 protein_coding protein_coding MGP_NODShiLtJ_T0071473.1 MGP_NODShiLtJ_G0029377.1 mouse_genomes_project 5 72647425 72657767 - Rfc1 protein_coding retained_intron MGP_NODShiLtJ_T0071474.1 MGP_NODShiLtJ_G0029377.1 mouse_genomes_project 5 72694528 72725297 - Rfc1 protein_coding retained_intron MGP_NODShiLtJ_T0004589.1 MGP_NODShiLtJ_G0003973.1 mouse_genomes_project 5 25453423 25461206 - Gm26648 antisense antisense MGP_NODShiLtJ_T0011480.1 MGP_NODShiLtJ_G0009613.1 mouse_genomes_project 5 25588557 25588802 - Gm25363 misc_RNA misc_RNA MGP_NODShiLtJ_T0018048.1 MGP_NODShiLtJ_G0015482.1 mouse_genomes_project 5 169307117 169315056 - 1810059H22Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018049.1 MGP_NODShiLtJ_G0015482.1 mouse_genomes_project 5 169308033 169309900 - 1810059H22Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018050.1 MGP_NODShiLtJ_G0015482.1 mouse_genomes_project 5 169313402 169314550 - 1810059H22Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018051.1 MGP_NODShiLtJ_G0015482.1 mouse_genomes_project 5 169313474 169325881 - 1810059H22Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018052.1 MGP_NODShiLtJ_G0015482.1 mouse_genomes_project 5 169313693 169314526 - 1810059H22Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018053.1 MGP_NODShiLtJ_G0015482.1 mouse_genomes_project 5 169313936 169320296 - 1810059H22Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018054.1 MGP_NODShiLtJ_G0015482.1 mouse_genomes_project 5 169319963 169325895 - 1810059H22Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018055.1 MGP_NODShiLtJ_G0015482.1 mouse_genomes_project 5 169320782 169326121 - 1810059H22Rik processed_transcript lincRNA MGP_NODShiLtJ_T0073565.1 MGP_NODShiLtJ_G0029814.1 mouse_genomes_project 5 137761735 137786628 - MGP_NODShiLtJ_P0073565 Oas3 protein_coding protein_coding MGP_NODShiLtJ_T0073566.1 MGP_NODShiLtJ_G0029814.1 mouse_genomes_project 5 137762853 137764896 - MGP_NODShiLtJ_P0073566 Oas3 protein_coding protein_coding MGP_NODShiLtJ_T0073567.1 MGP_NODShiLtJ_G0029814.1 mouse_genomes_project 5 137764036 137766292 - Oas3 protein_coding retained_intron MGP_NODShiLtJ_T0073568.1 MGP_NODShiLtJ_G0029814.1 mouse_genomes_project 5 137772385 137786607 - Oas3 protein_coding retained_intron MGP_NODShiLtJ_T0072852.1 MGP_NODShiLtJ_G0029676.1 mouse_genomes_project 5 125834208 125834271 + MGP_NODShiLtJ_P0072852 Gm21836 protein_coding protein_coding MGP_NODShiLtJ_T0075771.1 MGP_NODShiLtJ_G0030222.1 mouse_genomes_project 5 171533814 171578590 + MGP_NODShiLtJ_P0075771 Kl protein_coding protein_coding MGP_NODShiLtJ_T0075772.1 MGP_NODShiLtJ_G0030222.1 mouse_genomes_project 5 171533911 171571960 + Kl protein_coding retained_intron MGP_NODShiLtJ_T0071947.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86056055 86081363 + MGP_NODShiLtJ_P0071947 Srp72 protein_coding protein_coding MGP_NODShiLtJ_T0071948.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86056079 86080242 + MGP_NODShiLtJ_P0071948 Srp72 protein_coding protein_coding MGP_NODShiLtJ_T0071949.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86056093 86061779 + Srp72 protein_coding retained_intron MGP_NODShiLtJ_T0071950.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86061767 86063903 + Srp72 protein_coding retained_intron MGP_NODShiLtJ_T0071951.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86065283 86076573 + Srp72 protein_coding retained_intron MGP_NODShiLtJ_T0071952.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86075419 86076330 + Srp72 protein_coding retained_intron MGP_NODShiLtJ_T0071953.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86076683 86078915 + Srp72 protein_coding retained_intron MGP_NODShiLtJ_T0071954.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86078400 86081363 + Srp72 protein_coding retained_intron MGP_NODShiLtJ_T0071955.1 MGP_NODShiLtJ_G0029454.1 mouse_genomes_project 5 86078830 86079767 + Srp72 protein_coding retained_intron MGP_NODShiLtJ_T0008102.1 MGP_NODShiLtJ_G0006596.1 mouse_genomes_project 5 84057500 84099512 + Gm19583 lincRNA lincRNA MGP_NODShiLtJ_T0008353.1 MGP_NODShiLtJ_G0006767.1 mouse_genomes_project 5 159893865 159894628 - Gm43703 lincRNA lincRNA MGP_NODShiLtJ_T0014963.1 MGP_NODShiLtJ_G0013071.1 mouse_genomes_project 5 112223154 112223464 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072052.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99081731 99114885 + MGP_NODShiLtJ_P0072052 Ythdc1 protein_coding protein_coding MGP_NODShiLtJ_T0072053.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99081737 99114892 + MGP_NODShiLtJ_P0072053 Ythdc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072054.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99081743 99114890 + MGP_NODShiLtJ_P0072054 Ythdc1 protein_coding protein_coding MGP_NODShiLtJ_T0072055.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99082006 99114890 + MGP_NODShiLtJ_P0072055 Ythdc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072056.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99082074 99114888 + MGP_NODShiLtJ_P0072056 Ythdc1 protein_coding protein_coding MGP_NODShiLtJ_T0072057.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99083913 99087381 + Ythdc1 protein_coding retained_intron MGP_NODShiLtJ_T0072058.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99093819 99114890 + Ythdc1 protein_coding retained_intron MGP_NODShiLtJ_T0072059.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99101351 99106500 + Ythdc1 protein_coding retained_intron MGP_NODShiLtJ_T0072060.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99107484 99113963 + Ythdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0072061.1 MGP_NODShiLtJ_G0029477.1 mouse_genomes_project 5 99109808 99114888 + Ythdc1 protein_coding retained_intron MGP_NODShiLtJ_T0001417.1 MGP_NODShiLtJ_G0001336.1 mouse_genomes_project 5 11998920 12001417 - TEC TEC MGP_NODShiLtJ_T0014961.1 MGP_NODShiLtJ_G0013069.1 mouse_genomes_project 5 106641398 106643859 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014978.1 MGP_NODShiLtJ_G0013086.1 mouse_genomes_project 5 118327117 118327693 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008201.1 MGP_NODShiLtJ_G0006671.1 mouse_genomes_project 5 126198725 126215673 + Gm26718 lincRNA lincRNA MGP_NODShiLtJ_T0069767.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5636795 5979926 - MGP_NODShiLtJ_P0069767 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069768.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5636795 5979926 - MGP_NODShiLtJ_P0069768 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069769.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5636795 5979926 - MGP_NODShiLtJ_P0069769 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069770.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5636795 5980025 - MGP_NODShiLtJ_P0069770 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069771.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5636795 5980025 - MGP_NODShiLtJ_P0069771 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069772.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5642259 5686305 - MGP_NODShiLtJ_P0069772 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069773.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5643092 5681814 - MGP_NODShiLtJ_P0069773 Adam22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069774.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5643092 5681814 - MGP_NODShiLtJ_P0069774 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069775.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069775 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069776.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069776 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069777.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069777 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069778.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069778 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069779.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069779 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069780.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069780 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069781.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069781 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069782.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069782 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069783.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069783 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069784.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5646848 5681814 - MGP_NODShiLtJ_P0069784 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069785.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5653119 5655424 - Adam22 protein_coding retained_intron MGP_NODShiLtJ_T0069786.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5657480 5980021 - MGP_NODShiLtJ_P0069786 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069787.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5657543 5681814 - MGP_NODShiLtJ_P0069787 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069788.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5717257 5980025 - MGP_NODShiLtJ_P0069788 Adam22 protein_coding protein_coding MGP_NODShiLtJ_T0069791.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5816983 5980078 - Adam22 protein_coding processed_transcript MGP_NODShiLtJ_T0069792.1 MGP_NODShiLtJ_G0029084.1 mouse_genomes_project 5 5978925 5980104 - Adam22 protein_coding retained_intron MGP_NODShiLtJ_T0001632.1 MGP_NODShiLtJ_G0001547.1 mouse_genomes_project 5 75735709 75742888 - TEC TEC MGP_NODShiLtJ_T0008055.1 MGP_NODShiLtJ_G0006558.1 mouse_genomes_project 5 47718755 47734665 + 4930431F12Rik lincRNA lincRNA MGP_NODShiLtJ_T0070905.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36761122 36847315 + MGP_NODShiLtJ_P0070905 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070906.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36761125 36833806 + Rgs12 protein_coding retained_intron MGP_NODShiLtJ_T0070907.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36777584 36853176 + MGP_NODShiLtJ_P0070907 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070908.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36786584 36788046 + Rgs12 protein_coding processed_transcript MGP_NODShiLtJ_T0070909.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36787756 36833217 + Rgs12 protein_coding processed_transcript MGP_NODShiLtJ_T0070910.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36801892 36836895 + MGP_NODShiLtJ_P0070910 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070911.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36802148 36847162 + MGP_NODShiLtJ_P0070911 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070912.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36802313 36853167 + MGP_NODShiLtJ_P0070912 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070913.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36811829 36847311 + MGP_NODShiLtJ_P0070913 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070914.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36811850 36846824 + MGP_NODShiLtJ_P0070914 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070915.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36811956 36853167 + MGP_NODShiLtJ_P0070915 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070916.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36833823 36836385 + Rgs12 protein_coding retained_intron MGP_NODShiLtJ_T0070918.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36836553 36838059 + Rgs12 protein_coding retained_intron MGP_NODShiLtJ_T0070919.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36838063 36843810 + MGP_NODShiLtJ_P0070919 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0070920.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36840623 36845772 + Rgs12 protein_coding processed_transcript MGP_NODShiLtJ_T0070921.1 MGP_NODShiLtJ_G0029277.1 mouse_genomes_project 5 36840690 36853168 + MGP_NODShiLtJ_P0070921 Rgs12 protein_coding protein_coding MGP_NODShiLtJ_T0101345.1 MGP_NODShiLtJ_G0039581.1 mouse_genomes_project 5 34125466 34129627 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0001721.1 MGP_NODShiLtJ_G0001635.1 mouse_genomes_project 5 128493610 128494871 + TEC TEC MGP_NODShiLtJ_T0001821.1 MGP_NODShiLtJ_G0001734.1 mouse_genomes_project 5 150175957 150178192 - TEC TEC MGP_NODShiLtJ_T0074792.1 MGP_NODShiLtJ_G0030023.1 mouse_genomes_project 5 155973511 155974548 + MGP_NODShiLtJ_P0074792 Ufsp1 protein_coding protein_coding MGP_NODShiLtJ_T0014980.1 MGP_NODShiLtJ_G0013088.1 mouse_genomes_project 5 119946344 119946851 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008155.1 MGP_NODShiLtJ_G0006640.1 mouse_genomes_project 5 114351945 114369332 + lincRNA lincRNA MGP_NODShiLtJ_T0001534.1 MGP_NODShiLtJ_G0001450.1 mouse_genomes_project 5 52449259 52451803 - TEC TEC MGP_NODShiLtJ_T0015008.1 MGP_NODShiLtJ_G0013116.1 mouse_genomes_project 5 126681528 126683260 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072089.1 MGP_NODShiLtJ_G0029492.1 mouse_genomes_project 5 100225301 100228482 - MGP_NODShiLtJ_P0072089 Csn2 protein_coding protein_coding MGP_NODShiLtJ_T0072090.1 MGP_NODShiLtJ_G0029492.1 mouse_genomes_project 5 100225388 100227258 - Csn2 protein_coding processed_transcript MGP_NODShiLtJ_T0072091.1 MGP_NODShiLtJ_G0029492.1 mouse_genomes_project 5 100228282 100229505 - Csn2 protein_coding retained_intron MGP_NODShiLtJ_T0073916.1 MGP_NODShiLtJ_G0029871.1 mouse_genomes_project 5 140972003 140973946 - MGP_NODShiLtJ_P0073916 Il31 protein_coding protein_coding MGP_NODShiLtJ_T0073917.1 MGP_NODShiLtJ_G0029871.1 mouse_genomes_project 5 140972004 140974440 - MGP_NODShiLtJ_P0073917 Il31 protein_coding protein_coding MGP_NODShiLtJ_T0073918.1 MGP_NODShiLtJ_G0029871.1 mouse_genomes_project 5 140972249 140981331 - MGP_NODShiLtJ_P0073918 Il31 protein_coding protein_coding MGP_NODShiLtJ_T0073919.1 MGP_NODShiLtJ_G0029871.1 mouse_genomes_project 5 140974008 140974369 - Il31 protein_coding processed_transcript MGP_NODShiLtJ_T0001688.1 MGP_NODShiLtJ_G0001602.1 mouse_genomes_project 5 112549945 112553600 + TEC TEC MGP_NODShiLtJ_T0008063.1 MGP_NODShiLtJ_G0006565.1 mouse_genomes_project 5 56186941 56187216 - Gm43179 lincRNA lincRNA MGP_NODShiLtJ_T0014800.1 MGP_NODShiLtJ_G0012908.1 mouse_genomes_project 5 28817488 28817969 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014870.1 MGP_NODShiLtJ_G0012978.1 mouse_genomes_project 5 63601908 63602130 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004604.1 MGP_NODShiLtJ_G0003985.1 mouse_genomes_project 5 34242229 34243576 - Gm11399 antisense antisense MGP_NODShiLtJ_T0074363.1 MGP_NODShiLtJ_G0029950.1 mouse_genomes_project 5 148955531 148957490 - MGP_NODShiLtJ_P0074363 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0008104.1 MGP_NODShiLtJ_G0006598.1 mouse_genomes_project 5 84718967 84726975 + Gm43101 lincRNA lincRNA MGP_NODShiLtJ_T0008105.1 MGP_NODShiLtJ_G0006598.1 mouse_genomes_project 5 84725838 84726976 + Gm43101 lincRNA lincRNA MGP_NODShiLtJ_T0072581.1 MGP_NODShiLtJ_G0029608.1 mouse_genomes_project 5 118797769 118810570 + MGP_NODShiLtJ_P0072581 Nudt9 protein_coding protein_coding MGP_NODShiLtJ_T0072582.1 MGP_NODShiLtJ_G0029608.1 mouse_genomes_project 5 118797989 118812150 + MGP_NODShiLtJ_P0072582 Nudt9 protein_coding protein_coding MGP_NODShiLtJ_T0072583.1 MGP_NODShiLtJ_G0029608.1 mouse_genomes_project 5 118798332 118817770 + MGP_NODShiLtJ_P0072583 Nudt9 protein_coding protein_coding MGP_NODShiLtJ_T0072584.1 MGP_NODShiLtJ_G0029608.1 mouse_genomes_project 5 118798431 118810804 + Nudt9 protein_coding retained_intron MGP_NODShiLtJ_T0072585.1 MGP_NODShiLtJ_G0029608.1 mouse_genomes_project 5 118798617 118810550 + MGP_NODShiLtJ_P0072585 Nudt9 protein_coding protein_coding MGP_NODShiLtJ_T0072586.1 MGP_NODShiLtJ_G0029608.1 mouse_genomes_project 5 118799084 118807891 + MGP_NODShiLtJ_P0072586 Nudt9 protein_coding protein_coding MGP_NODShiLtJ_T0074970.1 MGP_NODShiLtJ_G0030058.1 mouse_genomes_project 5 156984540 157000765 - MGP_NODShiLtJ_P0074970 Zfp113 protein_coding protein_coding MGP_NODShiLtJ_T0074971.1 MGP_NODShiLtJ_G0030058.1 mouse_genomes_project 5 156989499 156996464 - MGP_NODShiLtJ_P0074971 Zfp113 protein_coding protein_coding MGP_NODShiLtJ_T0074972.1 MGP_NODShiLtJ_G0030058.1 mouse_genomes_project 5 156993386 157000721 - Zfp113 protein_coding retained_intron MGP_NODShiLtJ_T0074973.1 MGP_NODShiLtJ_G0030058.1 mouse_genomes_project 5 156993794 157000725 - MGP_NODShiLtJ_P0074973 Zfp113 protein_coding protein_coding MGP_NODShiLtJ_T0071121.1 MGP_NODShiLtJ_G0029313.1 mouse_genomes_project 5 40261330 40290624 + MGP_NODShiLtJ_P0071121 Otop1 protein_coding protein_coding MGP_NODShiLtJ_T0071122.1 MGP_NODShiLtJ_G0029313.1 mouse_genomes_project 5 40262762 40290632 + Otop1 protein_coding processed_transcript MGP_NODShiLtJ_T0071123.1 MGP_NODShiLtJ_G0029313.1 mouse_genomes_project 5 40262762 40290623 + MGP_NODShiLtJ_P0071123 Otop1 protein_coding protein_coding MGP_NODShiLtJ_T0071124.1 MGP_NODShiLtJ_G0029313.1 mouse_genomes_project 5 40272438 40289792 + Otop1 protein_coding processed_transcript MGP_NODShiLtJ_T0070063.1 MGP_NODShiLtJ_G0029135.1 mouse_genomes_project 5 24507381 24515772 - MGP_NODShiLtJ_P0070063 Tomm7 protein_coding protein_coding MGP_NODShiLtJ_T0014727.1 MGP_NODShiLtJ_G0012835.1 mouse_genomes_project 5 3914907 3915178 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072419.1 MGP_NODShiLtJ_G0029579.1 mouse_genomes_project 5 113567665 113605804 - MGP_NODShiLtJ_P0072419 protein_coding protein_coding MGP_NODShiLtJ_T0072420.1 MGP_NODShiLtJ_G0029579.1 mouse_genomes_project 5 113567665 113605804 - MGP_NODShiLtJ_P0072420 protein_coding protein_coding MGP_NODShiLtJ_T0072421.1 MGP_NODShiLtJ_G0029579.1 mouse_genomes_project 5 113569013 113593382 - MGP_NODShiLtJ_P0072421 protein_coding protein_coding MGP_NODShiLtJ_T0072422.1 MGP_NODShiLtJ_G0029579.1 mouse_genomes_project 5 113577928 113584209 - protein_coding retained_intron MGP_NODShiLtJ_T0071617.1 MGP_NODShiLtJ_G0029395.1 mouse_genomes_project 5 74640704 74645583 - MGP_NODShiLtJ_P0071617 Phox2b protein_coding protein_coding MGP_NODShiLtJ_T0071618.1 MGP_NODShiLtJ_G0029395.1 mouse_genomes_project 5 74643321 74645339 - MGP_NODShiLtJ_P0071618 Phox2b protein_coding protein_coding MGP_NODShiLtJ_T0075403.1 MGP_NODShiLtJ_G0030148.1 mouse_genomes_project 5 163624082 163716313 + MGP_NODShiLtJ_P0075403 Lmtk2 protein_coding protein_coding MGP_NODShiLtJ_T0001542.1 MGP_NODShiLtJ_G0001458.1 mouse_genomes_project 5 52589892 52594047 - TEC TEC MGP_NODShiLtJ_T0071055.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39154315 39184461 + MGP_NODShiLtJ_P0071055 Crmp1 protein_coding protein_coding MGP_NODShiLtJ_T0071056.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39154455 39207781 + MGP_NODShiLtJ_P0071056 Crmp1 protein_coding protein_coding MGP_NODShiLtJ_T0071057.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39155109 39193835 + MGP_NODShiLtJ_P0071057 Crmp1 protein_coding protein_coding MGP_NODShiLtJ_T0071058.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39158139 39207749 + MGP_NODShiLtJ_P0071058 Crmp1 protein_coding protein_coding MGP_NODShiLtJ_T0071059.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39158220 39181230 + Crmp1 protein_coding retained_intron MGP_NODShiLtJ_T0071060.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39161076 39194574 + MGP_NODShiLtJ_P0071060 Crmp1 protein_coding protein_coding MGP_NODShiLtJ_T0071061.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39184416 39192426 + Crmp1 protein_coding retained_intron MGP_NODShiLtJ_T0071062.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39195449 39198867 + Crmp1 protein_coding retained_intron MGP_NODShiLtJ_T0071063.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39196109 39198375 + Crmp1 protein_coding retained_intron MGP_NODShiLtJ_T0071064.1 MGP_NODShiLtJ_G0029302.1 mouse_genomes_project 5 39199568 39202310 + Crmp1 protein_coding retained_intron MGP_NODShiLtJ_T0008387.1 MGP_NODShiLtJ_G0006795.1 mouse_genomes_project 5 169532573 169543216 + Gm42788 lincRNA lincRNA MGP_NODShiLtJ_T0069742.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2883425 2914444 - MGP_NODShiLtJ_P0069742 Steap2 protein_coding protein_coding MGP_NODShiLtJ_T0069743.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2883427 2902371 - MGP_NODShiLtJ_P0069743 Steap2 protein_coding protein_coding MGP_NODShiLtJ_T0069744.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2884552 2913926 - MGP_NODShiLtJ_P0069744 Steap2 protein_coding protein_coding MGP_NODShiLtJ_T0069745.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2890330 2913918 - MGP_NODShiLtJ_P0069745 Steap2 protein_coding protein_coding MGP_NODShiLtJ_T0069746.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2890863 2913933 - MGP_NODShiLtJ_P0069746 Steap2 protein_coding protein_coding MGP_NODShiLtJ_T0069747.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2891097 2896612 - Steap2 protein_coding processed_transcript MGP_NODShiLtJ_T0069748.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2891102 2913926 - MGP_NODShiLtJ_P0069748 Steap2 protein_coding protein_coding MGP_NODShiLtJ_T0069749.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2892873 2914192 - MGP_NODShiLtJ_P0069749 Steap2 protein_coding protein_coding MGP_NODShiLtJ_T0069750.1 MGP_NODShiLtJ_G0029078.1 mouse_genomes_project 5 2895459 2914399 - Steap2 protein_coding retained_intron MGP_NODShiLtJ_T0008181.1 MGP_NODShiLtJ_G0006656.1 mouse_genomes_project 5 121280962 121289259 + Gm32736 lincRNA lincRNA MGP_NODShiLtJ_T0072223.1 MGP_NODShiLtJ_G0029535.1 mouse_genomes_project 5 104043080 104051705 + MGP_NODShiLtJ_P0072223 Epgn protein_coding protein_coding MGP_NODShiLtJ_T0072224.1 MGP_NODShiLtJ_G0029535.1 mouse_genomes_project 5 104043080 104052707 + MGP_NODShiLtJ_P0072224 Epgn protein_coding protein_coding MGP_NODShiLtJ_T0008380.1 MGP_NODShiLtJ_G0006790.1 mouse_genomes_project 5 169314082 169317705 + Gm15409 lincRNA lincRNA MGP_NODShiLtJ_T0008255.1 MGP_NODShiLtJ_G0006702.1 mouse_genomes_project 5 132995301 132997424 - 4930562A09Rik lincRNA lincRNA MGP_NODShiLtJ_T0004685.1 MGP_NODShiLtJ_G0004049.1 mouse_genomes_project 5 114071436 114105964 + Gm16226 antisense antisense MGP_NODShiLtJ_T0004686.1 MGP_NODShiLtJ_G0004049.1 mouse_genomes_project 5 114071436 114079366 + Gm16226 antisense antisense MGP_NODShiLtJ_T0004687.1 MGP_NODShiLtJ_G0004049.1 mouse_genomes_project 5 114071441 114105966 + Gm16226 antisense antisense MGP_NODShiLtJ_T0004688.1 MGP_NODShiLtJ_G0004049.1 mouse_genomes_project 5 114071465 114105962 + Gm16226 antisense antisense MGP_NODShiLtJ_T0008020.1 MGP_NODShiLtJ_G0006535.1 mouse_genomes_project 5 35636406 35637556 - Gm42851 lincRNA lincRNA MGP_NODShiLtJ_T0075530.1 MGP_NODShiLtJ_G0030180.1 mouse_genomes_project 5 166201111 166206972 - MGP_NODShiLtJ_P0075530 Gm6309 protein_coding protein_coding MGP_NODShiLtJ_T0001685.1 MGP_NODShiLtJ_G0001599.1 mouse_genomes_project 5 111099333 111099959 + TEC TEC MGP_NODShiLtJ_T0072171.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103174621 103348021 - MGP_NODShiLtJ_P0072171 Ankrd17 protein_coding protein_coding MGP_NODShiLtJ_T0072172.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103175274 103179919 - Ankrd17 protein_coding retained_intron MGP_NODShiLtJ_T0072173.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103175752 103348008 - MGP_NODShiLtJ_P0072173 Ankrd17 protein_coding protein_coding MGP_NODShiLtJ_T0072174.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103175920 103347830 - MGP_NODShiLtJ_P0072174 Ankrd17 protein_coding protein_coding MGP_NODShiLtJ_T0072175.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103176196 103300147 - MGP_NODShiLtJ_P0072175 Ankrd17 protein_coding protein_coding MGP_NODShiLtJ_T0072176.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103176737 103347649 - MGP_NODShiLtJ_P0072176 Ankrd17 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072177.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103185462 103188784 - Ankrd17 protein_coding retained_intron MGP_NODShiLtJ_T0072178.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103203645 103256750 - Ankrd17 protein_coding retained_intron MGP_NODShiLtJ_T0072179.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103210142 103216670 - Ankrd17 protein_coding retained_intron MGP_NODShiLtJ_T0072180.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103217204 103226826 - Ankrd17 protein_coding retained_intron MGP_NODShiLtJ_T0072181.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103227685 103229862 - Ankrd17 protein_coding retained_intron MGP_NODShiLtJ_T0072182.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103244976 103247818 - Ankrd17 protein_coding retained_intron MGP_NODShiLtJ_T0072183.1 MGP_NODShiLtJ_G0029520.1 mouse_genomes_project 5 103345695 103347787 - Ankrd17 protein_coding retained_intron MGP_NODShiLtJ_T0011495.1 MGP_NODShiLtJ_G0009628.1 mouse_genomes_project 5 127294959 127295070 - Gm27602 misc_RNA misc_RNA MGP_NODShiLtJ_T0070735.1 MGP_NODShiLtJ_G0029255.1 mouse_genomes_project 5 35300085 35316420 + MGP_NODShiLtJ_P0070735 Tacc3 protein_coding protein_coding MGP_NODShiLtJ_T0070736.1 MGP_NODShiLtJ_G0029255.1 mouse_genomes_project 5 35300085 35323370 + MGP_NODShiLtJ_P0070736 Tacc3 protein_coding protein_coding MGP_NODShiLtJ_T0070737.1 MGP_NODShiLtJ_G0029255.1 mouse_genomes_project 5 35300104 35306513 + MGP_NODShiLtJ_P0070737 Tacc3 protein_coding protein_coding MGP_NODShiLtJ_T0070738.1 MGP_NODShiLtJ_G0029255.1 mouse_genomes_project 5 35300511 35306167 + MGP_NODShiLtJ_P0070738 Tacc3 protein_coding protein_coding MGP_NODShiLtJ_T0070739.1 MGP_NODShiLtJ_G0029255.1 mouse_genomes_project 5 35300543 35316417 + MGP_NODShiLtJ_P0070739 Tacc3 protein_coding protein_coding MGP_NODShiLtJ_T0070740.1 MGP_NODShiLtJ_G0029255.1 mouse_genomes_project 5 35300591 35303973 + Tacc3 protein_coding retained_intron MGP_NODShiLtJ_T0070741.1 MGP_NODShiLtJ_G0029255.1 mouse_genomes_project 5 35311967 35316420 + MGP_NODShiLtJ_P0070741 Tacc3 protein_coding protein_coding MGP_NODShiLtJ_T0070742.1 MGP_NODShiLtJ_G0029255.1 mouse_genomes_project 5 35312030 35323360 + MGP_NODShiLtJ_P0070742 Tacc3 protein_coding protein_coding MGP_NODShiLtJ_T0010574.1 MGP_NODShiLtJ_G0008707.1 mouse_genomes_project 5 51568838 51568948 + Mir218-1 miRNA miRNA MGP_NODShiLtJ_T0001662.1 MGP_NODShiLtJ_G0001576.1 mouse_genomes_project 5 84841530 84843652 + TEC TEC MGP_NODShiLtJ_T0075145.1 MGP_NODShiLtJ_G0030091.1 mouse_genomes_project 5 158876808 158908567 - MGP_NODShiLtJ_P0075145 Micall2 protein_coding protein_coding MGP_NODShiLtJ_T0075146.1 MGP_NODShiLtJ_G0030091.1 mouse_genomes_project 5 158876858 158880148 - Micall2 protein_coding retained_intron MGP_NODShiLtJ_T0075147.1 MGP_NODShiLtJ_G0030091.1 mouse_genomes_project 5 158880055 158881540 - MGP_NODShiLtJ_P0075147 Micall2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014733.1 MGP_NODShiLtJ_G0012841.1 mouse_genomes_project 5 6638012 6638205 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004841.1 MGP_NODShiLtJ_G0004157.1 mouse_genomes_project 5 171102532 171108748 - Gm42529 antisense antisense MGP_NODShiLtJ_T0014986.1 MGP_NODShiLtJ_G0013094.1 mouse_genomes_project 5 121821470 121822212 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073039.1 MGP_NODShiLtJ_G0029712.1 mouse_genomes_project 5 128857600 129076527 - MGP_NODShiLtJ_P0073039 Myo18b protein_coding protein_coding MGP_NODShiLtJ_T0073040.1 MGP_NODShiLtJ_G0029712.1 mouse_genomes_project 5 128857602 128938717 - Myo18b protein_coding processed_transcript MGP_NODShiLtJ_T0073041.1 MGP_NODShiLtJ_G0029712.1 mouse_genomes_project 5 128950275 129051693 - Myo18b protein_coding processed_transcript MGP_NODShiLtJ_T0073042.1 MGP_NODShiLtJ_G0029712.1 mouse_genomes_project 5 128996474 129052603 - MGP_NODShiLtJ_P0073042 Myo18b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072336.1 MGP_NODShiLtJ_G0029558.1 mouse_genomes_project 5 106294381 106298526 - MGP_NODShiLtJ_P0072336 Sowahb protein_coding protein_coding MGP_NODShiLtJ_T0008362.1 MGP_NODShiLtJ_G0006774.1 mouse_genomes_project 5 163304523 163307542 + D130017N08Rik lincRNA lincRNA MGP_NODShiLtJ_T0014973.1 MGP_NODShiLtJ_G0013081.1 mouse_genomes_project 5 116088466 116089268 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014747.1 MGP_NODShiLtJ_G0012855.1 mouse_genomes_project 5 15254168 15254577 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008066.1 MGP_NODShiLtJ_G0006568.1 mouse_genomes_project 5 57222871 57224570 + lincRNA lincRNA MGP_NODShiLtJ_T0014919.1 MGP_NODShiLtJ_G0013027.1 mouse_genomes_project 5 85442338 85442490 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073153.1 MGP_NODShiLtJ_G0029734.1 mouse_genomes_project 5 130454126 130571662 + MGP_NODShiLtJ_P0073153 Acacb protein_coding protein_coding MGP_NODShiLtJ_T0073154.1 MGP_NODShiLtJ_G0029734.1 mouse_genomes_project 5 130466164 130571666 + MGP_NODShiLtJ_P0073154 Acacb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073155.1 MGP_NODShiLtJ_G0029734.1 mouse_genomes_project 5 130479405 130571656 + MGP_NODShiLtJ_P0073155 Acacb protein_coding protein_coding MGP_NODShiLtJ_T0073156.1 MGP_NODShiLtJ_G0029734.1 mouse_genomes_project 5 130491962 130508874 + MGP_NODShiLtJ_P0073156 Acacb protein_coding protein_coding MGP_NODShiLtJ_T0073157.1 MGP_NODShiLtJ_G0029734.1 mouse_genomes_project 5 130518321 130571660 + Acacb protein_coding retained_intron MGP_NODShiLtJ_T0073158.1 MGP_NODShiLtJ_G0029734.1 mouse_genomes_project 5 130569233 130569859 + Acacb protein_coding retained_intron MGP_NODShiLtJ_T0099368.1 MGP_NODShiLtJ_G0037762.1 mouse_genomes_project 5 97910362 97910523 + Gm24626 snRNA snRNA MGP_NODShiLtJ_T0100620.1 MGP_NODShiLtJ_G0039014.1 mouse_genomes_project 5 82978888 82979009 + Snora26 snoRNA snoRNA MGP_NODShiLtJ_T0100627.1 MGP_NODShiLtJ_G0039021.1 mouse_genomes_project 5 102731608 102731737 + Gm25758 snoRNA snoRNA MGP_NODShiLtJ_T0099381.1 MGP_NODShiLtJ_G0037775.1 mouse_genomes_project 5 119893218 119893325 + Gm24097 snRNA snRNA MGP_NODShiLtJ_T0014868.1 MGP_NODShiLtJ_G0012976.1 mouse_genomes_project 5 62527753 62529197 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098424.1 MGP_NODShiLtJ_G0036825.1 mouse_genomes_project 5 169847656 169849377 + 4933425D22Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0008112.1 MGP_NODShiLtJ_G0006604.1 mouse_genomes_project 5 86087517 86100410 - 1700112J05Rik lincRNA lincRNA MGP_NODShiLtJ_T0010637.1 MGP_NODShiLtJ_G0008770.1 mouse_genomes_project 5 169642491 169642569 - miRNA miRNA MGP_NODShiLtJ_T0004660.1 MGP_NODShiLtJ_G0004031.1 mouse_genomes_project 5 83620337 83648710 + Gm15984 antisense antisense MGP_NODShiLtJ_T0004661.1 MGP_NODShiLtJ_G0004031.1 mouse_genomes_project 5 83620759 83630829 + Gm15984 antisense antisense MGP_NODShiLtJ_T0071450.1 MGP_NODShiLtJ_G0029374.1 mouse_genomes_project 5 72410670 72451181 - Tmem156 protein_coding processed_transcript MGP_NODShiLtJ_T0071451.1 MGP_NODShiLtJ_G0029374.1 mouse_genomes_project 5 72418874 72451136 - MGP_NODShiLtJ_P0071451 Tmem156 protein_coding protein_coding MGP_NODShiLtJ_T0071452.1 MGP_NODShiLtJ_G0029374.1 mouse_genomes_project 5 72421422 72436176 - MGP_NODShiLtJ_P0071452 Tmem156 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0071453.1 MGP_NODShiLtJ_G0029374.1 mouse_genomes_project 5 72449146 72451177 - Tmem156 protein_coding retained_intron MGP_NODShiLtJ_T0075293.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162481547 162599149 - MGP_NODShiLtJ_P0075293 Rnf216 protein_coding protein_coding MGP_NODShiLtJ_T0075294.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162482474 162599135 - MGP_NODShiLtJ_P0075294 Rnf216 protein_coding protein_coding MGP_NODShiLtJ_T0075295.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162483271 162585253 - MGP_NODShiLtJ_P0075295 Rnf216 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075296.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162483303 162585253 - MGP_NODShiLtJ_P0075296 Rnf216 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075297.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162501266 162502668 - Rnf216 protein_coding retained_intron MGP_NODShiLtJ_T0075298.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162554281 162599135 - Rnf216 protein_coding retained_intron MGP_NODShiLtJ_T0075299.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162567728 162574573 - Rnf216 protein_coding retained_intron MGP_NODShiLtJ_T0075300.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162577018 162599135 - Rnf216 protein_coding processed_transcript MGP_NODShiLtJ_T0075301.1 MGP_NODShiLtJ_G0030124.1 mouse_genomes_project 5 162577207 162599137 - Rnf216 protein_coding processed_transcript MGP_NODShiLtJ_T0001850.1 MGP_NODShiLtJ_G0001762.1 mouse_genomes_project 5 159362950 159366909 - TEC TEC MGP_NODShiLtJ_T0008165.1 MGP_NODShiLtJ_G0006646.1 mouse_genomes_project 5 116296862 116302736 - Gm43271 lincRNA lincRNA MGP_NODShiLtJ_T0014979.1 MGP_NODShiLtJ_G0013087.1 mouse_genomes_project 5 118735427 118735649 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004625.1 MGP_NODShiLtJ_G0004002.1 mouse_genomes_project 5 46795650 46797724 + Gm16401 antisense antisense MGP_NODShiLtJ_T0004626.1 MGP_NODShiLtJ_G0004002.1 mouse_genomes_project 5 46795650 46797722 + Gm16401 antisense antisense MGP_NODShiLtJ_T0008339.1 MGP_NODShiLtJ_G0006756.1 mouse_genomes_project 5 154118549 154144269 - Gm43091 lincRNA lincRNA MGP_NODShiLtJ_T0073317.1 MGP_NODShiLtJ_G0029766.1 mouse_genomes_project 5 131779254 131787519 - MGP_NODShiLtJ_P0073317 Gatc protein_coding protein_coding MGP_NODShiLtJ_T0001606.1 MGP_NODShiLtJ_G0001521.1 mouse_genomes_project 5 73374708 73378836 + TEC TEC MGP_NODShiLtJ_T0014724.1 MGP_NODShiLtJ_G0012832.1 mouse_genomes_project 5 1801883 1802741 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075640.1 MGP_NODShiLtJ_G0030203.1 mouse_genomes_project 5 168598408 168688515 - MGP_NODShiLtJ_P0075640 Slc7a1 protein_coding protein_coding MGP_NODShiLtJ_T0075641.1 MGP_NODShiLtJ_G0030203.1 mouse_genomes_project 5 168607126 168680345 - MGP_NODShiLtJ_P0075641 Slc7a1 protein_coding protein_coding MGP_NODShiLtJ_T0075642.1 MGP_NODShiLtJ_G0030203.1 mouse_genomes_project 5 168612765 168614916 - Slc7a1 protein_coding retained_intron MGP_NODShiLtJ_T0075643.1 MGP_NODShiLtJ_G0030203.1 mouse_genomes_project 5 168614267 168688402 - MGP_NODShiLtJ_P0075643 Slc7a1 protein_coding protein_coding MGP_NODShiLtJ_T0075644.1 MGP_NODShiLtJ_G0030203.1 mouse_genomes_project 5 168624229 168646575 - MGP_NODShiLtJ_P0075644 Slc7a1 protein_coding protein_coding MGP_NODShiLtJ_T0075645.1 MGP_NODShiLtJ_G0030203.1 mouse_genomes_project 5 168678946 168681179 - Slc7a1 protein_coding retained_intron MGP_NODShiLtJ_T0008323.1 MGP_NODShiLtJ_G0006747.1 mouse_genomes_project 5 146384928 146386425 - lincRNA lincRNA MGP_NODShiLtJ_T0008324.1 MGP_NODShiLtJ_G0006747.1 mouse_genomes_project 5 146384930 146386448 - lincRNA lincRNA MGP_NODShiLtJ_T0099406.1 MGP_NODShiLtJ_G0037800.1 mouse_genomes_project 5 160929446 160929553 - Gm24131 snRNA snRNA MGP_NODShiLtJ_T0072123.1 MGP_NODShiLtJ_G0029506.1 mouse_genomes_project 5 101128656 101142241 + MGP_NODShiLtJ_P0072123 Amtn protein_coding protein_coding MGP_NODShiLtJ_T0075107.1 MGP_NODShiLtJ_G0030082.1 mouse_genomes_project 5 158402008 158438793 - Adap1 protein_coding processed_transcript MGP_NODShiLtJ_T0075108.1 MGP_NODShiLtJ_G0030082.1 mouse_genomes_project 5 158402008 158458844 - MGP_NODShiLtJ_P0075108 Adap1 protein_coding protein_coding MGP_NODShiLtJ_T0075109.1 MGP_NODShiLtJ_G0030082.1 mouse_genomes_project 5 158402908 158435628 - Adap1 protein_coding processed_transcript MGP_NODShiLtJ_T0075110.1 MGP_NODShiLtJ_G0030082.1 mouse_genomes_project 5 158402990 158438765 - Adap1 protein_coding processed_transcript MGP_NODShiLtJ_T0075111.1 MGP_NODShiLtJ_G0030082.1 mouse_genomes_project 5 158403062 158404774 - Adap1 protein_coding retained_intron MGP_NODShiLtJ_T0075112.1 MGP_NODShiLtJ_G0030082.1 mouse_genomes_project 5 158411055 158441031 - Adap1 protein_coding retained_intron MGP_NODShiLtJ_T0008056.1 MGP_NODShiLtJ_G0006559.1 mouse_genomes_project 5 47765745 48213153 - lincRNA lincRNA MGP_NODShiLtJ_T0008057.1 MGP_NODShiLtJ_G0006559.1 mouse_genomes_project 5 47893424 47965617 - lincRNA lincRNA MGP_NODShiLtJ_T0070471.1 MGP_NODShiLtJ_G0029215.1 mouse_genomes_project 5 32371395 32388902 - Gm29609 protein_coding processed_transcript MGP_NODShiLtJ_T0070474.1 MGP_NODShiLtJ_G0029215.1 mouse_genomes_project 5 32381891 32412669 - MGP_NODShiLtJ_P0070474 Gm29609 protein_coding protein_coding MGP_NODShiLtJ_T0014925.1 MGP_NODShiLtJ_G0013033.1 mouse_genomes_project 5 87785195 87786059 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069835.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6797510 6842550 - MGP_NODShiLtJ_P0069835 Dmtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069836.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6797514 6842580 - MGP_NODShiLtJ_P0069836 Dmtf1 protein_coding protein_coding MGP_NODShiLtJ_T0069837.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6797515 6842590 - MGP_NODShiLtJ_P0069837 Dmtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069838.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6797515 6842583 - MGP_NODShiLtJ_P0069838 Dmtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069839.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6797519 6842574 - MGP_NODShiLtJ_P0069839 Dmtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069840.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6797519 6834100 - MGP_NODShiLtJ_P0069840 Dmtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069841.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6797711 6842502 - MGP_NODShiLtJ_P0069841 Dmtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069842.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6798441 6799377 - Dmtf1 protein_coding retained_intron MGP_NODShiLtJ_T0069843.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6798677 6832864 - MGP_NODShiLtJ_P0069843 Dmtf1 protein_coding protein_coding MGP_NODShiLtJ_T0069844.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6800099 6806481 - MGP_NODShiLtJ_P0069844 Dmtf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069845.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6800703 6842574 - Dmtf1 protein_coding processed_transcript MGP_NODShiLtJ_T0069846.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6809269 6842568 - Dmtf1 protein_coding retained_intron MGP_NODShiLtJ_T0069847.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6811192 6842547 - MGP_NODShiLtJ_P0069847 Dmtf1 protein_coding protein_coding MGP_NODShiLtJ_T0069848.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6812464 6832997 - MGP_NODShiLtJ_P0069848 Dmtf1 protein_coding protein_coding MGP_NODShiLtJ_T0069849.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6821214 6842565 - Dmtf1 protein_coding retained_intron MGP_NODShiLtJ_T0069850.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6827308 6842580 - Dmtf1 protein_coding retained_intron MGP_NODShiLtJ_T0069851.1 MGP_NODShiLtJ_G0029096.1 mouse_genomes_project 5 6831382 6833890 - MGP_NODShiLtJ_P0069851 Dmtf1 protein_coding protein_coding MGP_NODShiLtJ_T0010618.1 MGP_NODShiLtJ_G0008751.1 mouse_genomes_project 5 154336474 154336552 - Gm23268 miRNA miRNA MGP_NODShiLtJ_T0101155.1 MGP_NODShiLtJ_G0039484.1 mouse_genomes_project 5 83211583 83212040 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0008270.1 MGP_NODShiLtJ_G0006715.1 mouse_genomes_project 5 136590996 136598765 - Tbx3os2 lincRNA lincRNA MGP_NODShiLtJ_T0071082.1 MGP_NODShiLtJ_G0029308.1 mouse_genomes_project 5 40012674 40109320 + MGP_NODShiLtJ_P0071082 Stx18 protein_coding protein_coding MGP_NODShiLtJ_T0071083.1 MGP_NODShiLtJ_G0029308.1 mouse_genomes_project 5 40012692 40109326 + MGP_NODShiLtJ_P0071083 Stx18 protein_coding protein_coding MGP_NODShiLtJ_T0071084.1 MGP_NODShiLtJ_G0029308.1 mouse_genomes_project 5 40012723 40089859 + MGP_NODShiLtJ_P0071084 Stx18 protein_coding protein_coding MGP_NODShiLtJ_T0071085.1 MGP_NODShiLtJ_G0029308.1 mouse_genomes_project 5 40012773 40109330 + MGP_NODShiLtJ_P0071085 Stx18 protein_coding protein_coding MGP_NODShiLtJ_T0071086.1 MGP_NODShiLtJ_G0029308.1 mouse_genomes_project 5 40050289 40101909 + MGP_NODShiLtJ_P0071086 Stx18 protein_coding protein_coding MGP_NODShiLtJ_T0071087.1 MGP_NODShiLtJ_G0029308.1 mouse_genomes_project 5 40084760 40095135 + Stx18 protein_coding processed_transcript MGP_NODShiLtJ_T0071088.1 MGP_NODShiLtJ_G0029308.1 mouse_genomes_project 5 40094744 40101935 + Stx18 protein_coding retained_intron MGP_NODShiLtJ_T0001496.1 MGP_NODShiLtJ_G0001412.1 mouse_genomes_project 5 46632802 46633344 - TEC TEC MGP_NODShiLtJ_T0071116.1 MGP_NODShiLtJ_G0029312.1 mouse_genomes_project 5 40245124 40254993 + MGP_NODShiLtJ_P0071116 Tmem128 protein_coding protein_coding MGP_NODShiLtJ_T0071117.1 MGP_NODShiLtJ_G0029312.1 mouse_genomes_project 5 40245310 40247217 + Tmem128 protein_coding retained_intron MGP_NODShiLtJ_T0071118.1 MGP_NODShiLtJ_G0029312.1 mouse_genomes_project 5 40245323 40252829 + MGP_NODShiLtJ_P0071118 Tmem128 protein_coding protein_coding MGP_NODShiLtJ_T0071119.1 MGP_NODShiLtJ_G0029312.1 mouse_genomes_project 5 40245326 40250313 + Tmem128 protein_coding retained_intron MGP_NODShiLtJ_T0071120.1 MGP_NODShiLtJ_G0029312.1 mouse_genomes_project 5 40249819 40252826 + MGP_NODShiLtJ_P0071120 Tmem128 protein_coding protein_coding MGP_NODShiLtJ_T0014739.1 MGP_NODShiLtJ_G0012847.1 mouse_genomes_project 5 8817308 8817777 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071149.1 MGP_NODShiLtJ_G0029317.1 mouse_genomes_project 5 40693607 40710839 - MGP_NODShiLtJ_P0071149 Zfp518b protein_coding protein_coding MGP_NODShiLtJ_T0071150.1 MGP_NODShiLtJ_G0029317.1 mouse_genomes_project 5 40693609 40710763 - MGP_NODShiLtJ_P0071150 Zfp518b protein_coding protein_coding MGP_NODShiLtJ_T0071151.1 MGP_NODShiLtJ_G0029317.1 mouse_genomes_project 5 40699299 40710839 - MGP_NODShiLtJ_P0071151 Zfp518b protein_coding protein_coding MGP_NODShiLtJ_T0071152.1 MGP_NODShiLtJ_G0029317.1 mouse_genomes_project 5 40699750 40710770 - MGP_NODShiLtJ_P0071152 Zfp518b protein_coding protein_coding MGP_NODShiLtJ_T0004587.1 MGP_NODShiLtJ_G0003972.1 mouse_genomes_project 5 25093149 25110469 - Gm15587 antisense antisense MGP_NODShiLtJ_T0004588.1 MGP_NODShiLtJ_G0003972.1 mouse_genomes_project 5 25096144 25110501 - Gm15587 antisense antisense MGP_NODShiLtJ_T0072126.1 MGP_NODShiLtJ_G0029508.1 mouse_genomes_project 5 101246415 101280407 + MGP_NODShiLtJ_P0072126 Enam protein_coding protein_coding MGP_NODShiLtJ_T0072127.1 MGP_NODShiLtJ_G0029508.1 mouse_genomes_project 5 101246422 101281726 + MGP_NODShiLtJ_P0072127 Enam protein_coding protein_coding MGP_NODShiLtJ_T0001656.1 MGP_NODShiLtJ_G0001570.1 mouse_genomes_project 5 83270178 83272931 - TEC TEC MGP_NODShiLtJ_T0008189.1 MGP_NODShiLtJ_G0006663.1 mouse_genomes_project 5 121785005 121785518 + Gm29464 lincRNA lincRNA MGP_NODShiLtJ_T0069832.1 MGP_NODShiLtJ_G0029095.1 mouse_genomes_project 5 6778804 6838848 + MGP_NODShiLtJ_P0069832 Tmem243 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069833.1 MGP_NODShiLtJ_G0029095.1 mouse_genomes_project 5 6778883 6797688 + MGP_NODShiLtJ_P0069833 Tmem243 protein_coding protein_coding MGP_NODShiLtJ_T0069834.1 MGP_NODShiLtJ_G0029095.1 mouse_genomes_project 5 6791906 6797626 + MGP_NODShiLtJ_P0069834 Tmem243 protein_coding protein_coding MGP_NODShiLtJ_T0069852.1 MGP_NODShiLtJ_G0029095.1 mouse_genomes_project 5 6836504 6841817 + Tmem243 protein_coding processed_transcript MGP_NODShiLtJ_T0071170.1 MGP_NODShiLtJ_G0029324.1 mouse_genomes_project 5 45844952 45913183 + MGP_NODShiLtJ_P0071170 Cpeb2 protein_coding protein_coding MGP_NODShiLtJ_T0071171.1 MGP_NODShiLtJ_G0029324.1 mouse_genomes_project 5 45845245 45908716 + MGP_NODShiLtJ_P0071171 Cpeb2 protein_coding protein_coding MGP_NODShiLtJ_T0071172.1 MGP_NODShiLtJ_G0029324.1 mouse_genomes_project 5 45845709 45849702 + Cpeb2 protein_coding retained_intron MGP_NODShiLtJ_T0071173.1 MGP_NODShiLtJ_G0029324.1 mouse_genomes_project 5 45846820 45902633 + MGP_NODShiLtJ_P0071173 Cpeb2 protein_coding protein_coding MGP_NODShiLtJ_T0071174.1 MGP_NODShiLtJ_G0029324.1 mouse_genomes_project 5 45846832 45847668 + Cpeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0071175.1 MGP_NODShiLtJ_G0029324.1 mouse_genomes_project 5 45849097 45859633 + Cpeb2 protein_coding processed_transcript MGP_NODShiLtJ_T0072651.1 MGP_NODShiLtJ_G0029630.1 mouse_genomes_project 5 121651925 121657537 - MGP_NODShiLtJ_P0072651 Barhl2 protein_coding protein_coding MGP_NODShiLtJ_T0071644.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75235741 75481296 - MGP_NODShiLtJ_P0071644 Atp8a1 protein_coding protein_coding MGP_NODShiLtJ_T0071645.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75235741 75481360 - MGP_NODShiLtJ_P0071645 Atp8a1 protein_coding protein_coding MGP_NODShiLtJ_T0071646.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75236763 75481357 - MGP_NODShiLtJ_P0071646 Atp8a1 protein_coding protein_coding MGP_NODShiLtJ_T0071647.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75238179 75481221 - MGP_NODShiLtJ_P0071647 Atp8a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071648.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75240280 75278389 - Atp8a1 protein_coding processed_transcript MGP_NODShiLtJ_T0071649.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75303403 75401595 - Atp8a1 protein_coding retained_intron MGP_NODShiLtJ_T0071650.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75391128 75393611 - Atp8a1 protein_coding retained_intron MGP_NODShiLtJ_T0071651.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75401003 75447279 - Atp8a1 protein_coding processed_transcript MGP_NODShiLtJ_T0071652.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75405713 75481357 - MGP_NODShiLtJ_P0071652 Atp8a1 protein_coding protein_coding MGP_NODShiLtJ_T0071653.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75405713 75481357 - MGP_NODShiLtJ_P0071653 Atp8a1 protein_coding protein_coding MGP_NODShiLtJ_T0071654.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75413750 75481355 - Atp8a1 protein_coding retained_intron MGP_NODShiLtJ_T0071655.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75436038 75439398 - Atp8a1 protein_coding retained_intron MGP_NODShiLtJ_T0071656.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75444216 75447288 - Atp8a1 protein_coding retained_intron MGP_NODShiLtJ_T0071657.1 MGP_NODShiLtJ_G0029400.1 mouse_genomes_project 5 75444220 75447902 - MGP_NODShiLtJ_P0071657 Atp8a1 protein_coding protein_coding MGP_NODShiLtJ_T0071977.1 MGP_NODShiLtJ_G0029462.1 mouse_genomes_project 5 86483308 86546725 - MGP_NODShiLtJ_P0071977 Igfbp7 protein_coding protein_coding MGP_NODShiLtJ_T0071978.1 MGP_NODShiLtJ_G0029462.1 mouse_genomes_project 5 86483316 86546724 - MGP_NODShiLtJ_P0071978 Igfbp7 protein_coding protein_coding MGP_NODShiLtJ_T0099330.1 MGP_NODShiLtJ_G0037724.1 mouse_genomes_project 5 3600060 3600153 + Gm24686 snRNA snRNA MGP_NODShiLtJ_T0015104.1 MGP_NODShiLtJ_G0013212.1 mouse_genomes_project 5 171593581 171595437 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074818.1 MGP_NODShiLtJ_G0030027.1 mouse_genomes_project 5 156035868 156061206 + MGP_NODShiLtJ_P0074818 Ephb4 protein_coding protein_coding MGP_NODShiLtJ_T0074819.1 MGP_NODShiLtJ_G0030027.1 mouse_genomes_project 5 156035900 156065324 + MGP_NODShiLtJ_P0074819 Ephb4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074820.1 MGP_NODShiLtJ_G0030027.1 mouse_genomes_project 5 156035931 156061200 + MGP_NODShiLtJ_P0074820 Ephb4 protein_coding protein_coding MGP_NODShiLtJ_T0074821.1 MGP_NODShiLtJ_G0030027.1 mouse_genomes_project 5 156036189 156060990 + MGP_NODShiLtJ_P0074821 Ephb4 protein_coding protein_coding MGP_NODShiLtJ_T0074822.1 MGP_NODShiLtJ_G0030027.1 mouse_genomes_project 5 156036272 156061210 + MGP_NODShiLtJ_P0074822 Ephb4 protein_coding protein_coding MGP_NODShiLtJ_T0073091.1 MGP_NODShiLtJ_G0029722.1 mouse_genomes_project 5 129997712 130002510 + MGP_NODShiLtJ_P0073091 Ficd protein_coding protein_coding MGP_NODShiLtJ_T0001678.1 MGP_NODShiLtJ_G0001592.1 mouse_genomes_project 5 106432311 106434401 + TEC TEC MGP_NODShiLtJ_T0074108.1 MGP_NODShiLtJ_G0029900.1 mouse_genomes_project 5 142156165 142170908 + MGP_NODShiLtJ_P0074108 Ddx55 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074109.1 MGP_NODShiLtJ_G0029900.1 mouse_genomes_project 5 142156174 142172618 + MGP_NODShiLtJ_P0074109 Ddx55 protein_coding protein_coding MGP_NODShiLtJ_T0074110.1 MGP_NODShiLtJ_G0029900.1 mouse_genomes_project 5 142156192 142164626 + Ddx55 protein_coding processed_transcript MGP_NODShiLtJ_T0074111.1 MGP_NODShiLtJ_G0029900.1 mouse_genomes_project 5 142156254 142164682 + Ddx55 protein_coding processed_transcript MGP_NODShiLtJ_T0074112.1 MGP_NODShiLtJ_G0029900.1 mouse_genomes_project 5 142158957 142160387 + Ddx55 protein_coding retained_intron MGP_NODShiLtJ_T0074113.1 MGP_NODShiLtJ_G0029900.1 mouse_genomes_project 5 142165796 142170828 + Ddx55 protein_coding processed_transcript MGP_NODShiLtJ_T0008050.1 MGP_NODShiLtJ_G0006553.1 mouse_genomes_project 5 46009343 46012522 + Gm43699 lincRNA lincRNA MGP_NODShiLtJ_T0071815.1 MGP_NODShiLtJ_G0029433.1 mouse_genomes_project 5 83086213 83090409 + MGP_NODShiLtJ_P0071815 Rasl11b protein_coding protein_coding MGP_NODShiLtJ_T0071816.1 MGP_NODShiLtJ_G0029433.1 mouse_genomes_project 5 83086372 83087218 + Rasl11b protein_coding retained_intron MGP_NODShiLtJ_T0071817.1 MGP_NODShiLtJ_G0029433.1 mouse_genomes_project 5 83088818 83090400 + Rasl11b protein_coding retained_intron MGP_NODShiLtJ_T0014908.1 MGP_NODShiLtJ_G0013016.1 mouse_genomes_project 5 81452145 81452455 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008058.1 MGP_NODShiLtJ_G0006560.1 mouse_genomes_project 5 47982643 48040159 - Gm43303 lincRNA lincRNA MGP_NODShiLtJ_T0071543.1 MGP_NODShiLtJ_G0029387.1 mouse_genomes_project 5 73322209 73359409 + MGP_NODShiLtJ_P0071543 Rhoh protein_coding protein_coding MGP_NODShiLtJ_T0071544.1 MGP_NODShiLtJ_G0029387.1 mouse_genomes_project 5 73324808 73356152 + MGP_NODShiLtJ_P0071544 Rhoh protein_coding protein_coding MGP_NODShiLtJ_T0071545.1 MGP_NODShiLtJ_G0029387.1 mouse_genomes_project 5 73325381 73329737 + Rhoh protein_coding processed_transcript MGP_NODShiLtJ_T0071546.1 MGP_NODShiLtJ_G0029387.1 mouse_genomes_project 5 73325419 73330197 + Rhoh protein_coding retained_intron MGP_NODShiLtJ_T0014869.1 MGP_NODShiLtJ_G0012977.1 mouse_genomes_project 5 62646596 62647227 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015015.1 MGP_NODShiLtJ_G0013123.1 mouse_genomes_project 5 130556957 130558816 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101969.1 MGP_NODShiLtJ_G0040137.1 mouse_genomes_project 5 165773749 165790237 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0072603.1 MGP_NODShiLtJ_G0029616.1 mouse_genomes_project 5 119244979 119288875 + MGP_NODShiLtJ_P0072603 Pkd2 protein_coding protein_coding MGP_NODShiLtJ_T0072604.1 MGP_NODShiLtJ_G0029616.1 mouse_genomes_project 5 119245099 119272057 + Pkd2 protein_coding processed_transcript MGP_NODShiLtJ_T0072605.1 MGP_NODShiLtJ_G0029616.1 mouse_genomes_project 5 119274507 119283843 + Pkd2 protein_coding retained_intron MGP_NODShiLtJ_T0008167.1 MGP_NODShiLtJ_G0006648.1 mouse_genomes_project 5 116689705 116691269 + Gm29707 lincRNA lincRNA MGP_NODShiLtJ_T0008168.1 MGP_NODShiLtJ_G0006648.1 mouse_genomes_project 5 116690336 116690827 + Gm29707 lincRNA lincRNA MGP_NODShiLtJ_T0101960.1 MGP_NODShiLtJ_G0040128.1 mouse_genomes_project 5 125026398 125033517 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0072768.1 MGP_NODShiLtJ_G0029652.1 mouse_genomes_project 5 123474308 123606273 + MGP_NODShiLtJ_P0072768 protein_coding protein_coding MGP_NODShiLtJ_T0072769.1 MGP_NODShiLtJ_G0029652.1 mouse_genomes_project 5 123474340 123485330 + protein_coding retained_intron MGP_NODShiLtJ_T0072770.1 MGP_NODShiLtJ_G0029652.1 mouse_genomes_project 5 123504192 123516932 + protein_coding processed_transcript MGP_NODShiLtJ_T0008095.1 MGP_NODShiLtJ_G0006590.1 mouse_genomes_project 5 82770186 82778848 + Gm43801 lincRNA lincRNA MGP_NODShiLtJ_T0001855.1 MGP_NODShiLtJ_G0001767.1 mouse_genomes_project 5 162818438 162819464 + TEC TEC MGP_NODShiLtJ_T0004758.1 MGP_NODShiLtJ_G0004097.1 mouse_genomes_project 5 138584630 138586209 + Gm42918 antisense antisense MGP_NODShiLtJ_T0001506.1 MGP_NODShiLtJ_G0001422.1 mouse_genomes_project 5 47398530 47400535 - TEC TEC MGP_NODShiLtJ_T0014924.1 MGP_NODShiLtJ_G0013032.1 mouse_genomes_project 5 87106614 87106951 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001520.1 MGP_NODShiLtJ_G0001436.1 mouse_genomes_project 5 51426380 51428719 + TEC TEC MGP_NODShiLtJ_T0073297.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131681397 131714275 - MGP_NODShiLtJ_P0073297 Rnf10 protein_coding protein_coding MGP_NODShiLtJ_T0073298.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131681755 131714269 - MGP_NODShiLtJ_P0073298 Rnf10 protein_coding protein_coding MGP_NODShiLtJ_T0073299.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131681755 131714272 - MGP_NODShiLtJ_P0073299 Rnf10 protein_coding protein_coding MGP_NODShiLtJ_T0073300.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131681760 131682688 - Rnf10 protein_coding retained_intron MGP_NODShiLtJ_T0073301.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131681764 131713678 - MGP_NODShiLtJ_P0073301 Rnf10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073302.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131683690 131686075 - Rnf10 protein_coding retained_intron MGP_NODShiLtJ_T0073303.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131688692 131689487 - Rnf10 protein_coding processed_transcript MGP_NODShiLtJ_T0073304.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131691292 131696445 - Rnf10 protein_coding retained_intron MGP_NODShiLtJ_T0073305.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131691313 131701199 - Rnf10 protein_coding processed_transcript MGP_NODShiLtJ_T0073306.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131697038 131698710 - Rnf10 protein_coding retained_intron MGP_NODShiLtJ_T0073307.1 MGP_NODShiLtJ_G0029762.1 mouse_genomes_project 5 131711996 131714272 - Rnf10 protein_coding retained_intron MGP_NODShiLtJ_T0072973.1 MGP_NODShiLtJ_G0029696.1 mouse_genomes_project 5 126834550 126848393 - MGP_NODShiLtJ_P0072973 Hscb protein_coding protein_coding MGP_NODShiLtJ_T0072974.1 MGP_NODShiLtJ_G0029696.1 mouse_genomes_project 5 126834560 126848191 - MGP_NODShiLtJ_P0072974 Hscb protein_coding protein_coding MGP_NODShiLtJ_T0072975.1 MGP_NODShiLtJ_G0029696.1 mouse_genomes_project 5 126834560 126844288 - MGP_NODShiLtJ_P0072975 Hscb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072976.1 MGP_NODShiLtJ_G0029696.1 mouse_genomes_project 5 126834561 126842903 - Hscb protein_coding retained_intron MGP_NODShiLtJ_T0071410.1 MGP_NODShiLtJ_G0029365.1 mouse_genomes_project 5 70896648 71049217 + Nwd2 protein_coding retained_intron MGP_NODShiLtJ_T0071411.1 MGP_NODShiLtJ_G0029365.1 mouse_genomes_project 5 70896654 71066172 + MGP_NODShiLtJ_P0071411 Nwd2 protein_coding protein_coding MGP_NODShiLtJ_T0071412.1 MGP_NODShiLtJ_G0029365.1 mouse_genomes_project 5 70896879 71056291 + MGP_NODShiLtJ_P0071412 Nwd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071413.1 MGP_NODShiLtJ_G0029365.1 mouse_genomes_project 5 71056105 71066172 + MGP_NODShiLtJ_P0071413 Nwd2 protein_coding protein_coding MGP_NODShiLtJ_T0001633.1 MGP_NODShiLtJ_G0001548.1 mouse_genomes_project 5 76856977 76860148 - TEC TEC MGP_NODShiLtJ_T0001731.1 MGP_NODShiLtJ_G0001645.1 mouse_genomes_project 5 130182081 130186585 - TEC TEC MGP_NODShiLtJ_T0099340.1 MGP_NODShiLtJ_G0037734.1 mouse_genomes_project 5 25170026 25170127 - Gm22333 snRNA snRNA MGP_NODShiLtJ_T0014911.1 MGP_NODShiLtJ_G0013019.1 mouse_genomes_project 5 83810240 83811141 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098403.1 MGP_NODShiLtJ_G0036808.1 mouse_genomes_project 5 105951305 105952543 + Gm20500 sense_intronic sense_intronic MGP_NODShiLtJ_T0015098.1 MGP_NODShiLtJ_G0013206.1 mouse_genomes_project 5 169916845 169917395 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074114.1 MGP_NODShiLtJ_G0029901.1 mouse_genomes_project 5 142173165 142182031 - MGP_NODShiLtJ_P0074114 Eif2b1 protein_coding protein_coding MGP_NODShiLtJ_T0074115.1 MGP_NODShiLtJ_G0029901.1 mouse_genomes_project 5 142174703 142177869 - Eif2b1 protein_coding retained_intron MGP_NODShiLtJ_T0074116.1 MGP_NODShiLtJ_G0029901.1 mouse_genomes_project 5 142176033 142181961 - MGP_NODShiLtJ_P0074116 Eif2b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074117.1 MGP_NODShiLtJ_G0029901.1 mouse_genomes_project 5 142176683 142181975 - MGP_NODShiLtJ_P0074117 Eif2b1 protein_coding protein_coding MGP_NODShiLtJ_T0074118.1 MGP_NODShiLtJ_G0029901.1 mouse_genomes_project 5 142179724 142181892 - MGP_NODShiLtJ_P0074118 Eif2b1 protein_coding protein_coding MGP_NODShiLtJ_T0074119.1 MGP_NODShiLtJ_G0029901.1 mouse_genomes_project 5 142181418 142181932 - MGP_NODShiLtJ_P0074119 Eif2b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098425.1 MGP_NODShiLtJ_G0036826.1 mouse_genomes_project 5 170506120 170506385 + Gm42558 sense_intronic sense_intronic MGP_NODShiLtJ_T0001527.1 MGP_NODShiLtJ_G0001443.1 mouse_genomes_project 5 52198667 52200934 - TEC TEC MGP_NODShiLtJ_T0072374.1 MGP_NODShiLtJ_G0029566.1 mouse_genomes_project 5 110346044 110787517 + MGP_NODShiLtJ_P0072374 Fras1 protein_coding protein_coding MGP_NODShiLtJ_T0072375.1 MGP_NODShiLtJ_G0029566.1 mouse_genomes_project 5 110346295 110540719 + Fras1 protein_coding retained_intron MGP_NODShiLtJ_T0072376.1 MGP_NODShiLtJ_G0029566.1 mouse_genomes_project 5 110346524 110361693 + Fras1 protein_coding retained_intron MGP_NODShiLtJ_T0072377.1 MGP_NODShiLtJ_G0029566.1 mouse_genomes_project 5 110610833 110633859 + Fras1 protein_coding processed_transcript MGP_NODShiLtJ_T0072378.1 MGP_NODShiLtJ_G0029566.1 mouse_genomes_project 5 110611050 110633971 + Fras1 protein_coding processed_transcript MGP_NODShiLtJ_T0072379.1 MGP_NODShiLtJ_G0029566.1 mouse_genomes_project 5 110625734 110633859 + Fras1 protein_coding processed_transcript MGP_NODShiLtJ_T0014947.1 MGP_NODShiLtJ_G0013055.1 mouse_genomes_project 5 101619422 101621052 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072076.1 MGP_NODShiLtJ_G0029487.1 mouse_genomes_project 5 99888346 99919489 - MGP_NODShiLtJ_P0072076 Ugt2a2 protein_coding protein_coding MGP_NODShiLtJ_T0072078.1 MGP_NODShiLtJ_G0029487.1 mouse_genomes_project 5 99889075 99919491 - MGP_NODShiLtJ_P0072078 Ugt2a2 protein_coding protein_coding MGP_NODShiLtJ_T0008267.1 MGP_NODShiLtJ_G0006712.1 mouse_genomes_project 5 136405258 136414416 - Gm31314 lincRNA lincRNA MGP_NODShiLtJ_T0069915.1 MGP_NODShiLtJ_G0029109.1 mouse_genomes_project 5 18200249 18304055 - MGP_NODShiLtJ_P0069915 Gnai1 protein_coding protein_coding MGP_NODShiLtJ_T0001513.1 MGP_NODShiLtJ_G0001429.1 mouse_genomes_project 5 48533614 48537262 + TEC TEC MGP_NODShiLtJ_T0008239.1 MGP_NODShiLtJ_G0006692.1 mouse_genomes_project 5 130895274 130898002 + Gm13790 lincRNA lincRNA MGP_NODShiLtJ_T0014877.1 MGP_NODShiLtJ_G0012985.1 mouse_genomes_project 5 66344574 66345208 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071031.1 MGP_NODShiLtJ_G0029298.1 mouse_genomes_project 5 38698570 38723250 - MGP_NODShiLtJ_P0071031 Man2b2 protein_coding protein_coding MGP_NODShiLtJ_T0071032.1 MGP_NODShiLtJ_G0029298.1 mouse_genomes_project 5 38701396 38705563 - MGP_NODShiLtJ_P0071032 Man2b2 protein_coding protein_coding MGP_NODShiLtJ_T0071033.1 MGP_NODShiLtJ_G0029298.1 mouse_genomes_project 5 38701402 38710281 - MGP_NODShiLtJ_P0071033 Man2b2 protein_coding protein_coding MGP_NODShiLtJ_T0008012.1 MGP_NODShiLtJ_G0006529.1 mouse_genomes_project 5 32871929 32880191 - Gm43660 lincRNA lincRNA MGP_NODShiLtJ_T0001473.1 MGP_NODShiLtJ_G0001389.1 mouse_genomes_project 5 36252950 36255358 + TEC TEC MGP_NODShiLtJ_T0014970.1 MGP_NODShiLtJ_G0013078.1 mouse_genomes_project 5 115010504 115010938 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014746.1 MGP_NODShiLtJ_G0012854.1 mouse_genomes_project 5 12946016 12946980 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071165.1 MGP_NODShiLtJ_G0029322.1 mouse_genomes_project 5 44296775 44357306 - MGP_NODShiLtJ_P0071165 Bod1l protein_coding protein_coding MGP_NODShiLtJ_T0071166.1 MGP_NODShiLtJ_G0029322.1 mouse_genomes_project 5 44296775 44357306 - MGP_NODShiLtJ_P0071166 Bod1l protein_coding protein_coding MGP_NODShiLtJ_T0071167.1 MGP_NODShiLtJ_G0029322.1 mouse_genomes_project 5 44333878 44336068 - Bod1l protein_coding processed_transcript MGP_NODShiLtJ_T0071168.1 MGP_NODShiLtJ_G0029322.1 mouse_genomes_project 5 44334770 44357283 - Bod1l protein_coding retained_intron MGP_NODShiLtJ_T0004622.1 MGP_NODShiLtJ_G0004000.1 mouse_genomes_project 5 46183156 46191031 - Gm15866 antisense antisense MGP_NODShiLtJ_T0004623.1 MGP_NODShiLtJ_G0004000.1 mouse_genomes_project 5 46190546 46234194 - Gm15866 antisense antisense MGP_NODShiLtJ_T0071311.1 MGP_NODShiLtJ_G0029345.1 mouse_genomes_project 5 55223654 55351533 - MGP_NODShiLtJ_P0071311 Ppargc1a protein_coding protein_coding MGP_NODShiLtJ_T0071312.1 MGP_NODShiLtJ_G0029345.1 mouse_genomes_project 5 55227063 55351622 - MGP_NODShiLtJ_P0071312 Ppargc1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071313.1 MGP_NODShiLtJ_G0029345.1 mouse_genomes_project 5 55227596 55367782 - MGP_NODShiLtJ_P0071313 Ppargc1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071314.1 MGP_NODShiLtJ_G0029345.1 mouse_genomes_project 5 55282001 55367804 - MGP_NODShiLtJ_P0071314 Ppargc1a protein_coding protein_coding MGP_NODShiLtJ_T0072114.1 MGP_NODShiLtJ_G0029501.1 mouse_genomes_project 5 100701045 100707882 + MGP_NODShiLtJ_P0072114 Smr3a protein_coding protein_coding MGP_NODShiLtJ_T0072115.1 MGP_NODShiLtJ_G0029501.1 mouse_genomes_project 5 100701049 100707885 + MGP_NODShiLtJ_P0072115 Smr3a protein_coding protein_coding MGP_NODShiLtJ_T0072778.1 MGP_NODShiLtJ_G0029656.1 mouse_genomes_project 5 123851173 123852378 - MGP_NODShiLtJ_P0072778 Atp5k protein_coding protein_coding MGP_NODShiLtJ_T0072779.1 MGP_NODShiLtJ_G0029656.1 mouse_genomes_project 5 123851173 123852378 - MGP_NODShiLtJ_P0072779 Atp5k protein_coding protein_coding MGP_NODShiLtJ_T0072780.1 MGP_NODShiLtJ_G0029656.1 mouse_genomes_project 5 123851175 123852327 - Atp5k protein_coding retained_intron MGP_NODShiLtJ_T0075405.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163722514 163754936 - MGP_NODShiLtJ_P0075405 Tecpr1 protein_coding protein_coding MGP_NODShiLtJ_T0075406.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163723763 163754868 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075407.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163724328 163754939 - MGP_NODShiLtJ_P0075407 Tecpr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0075408.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163724539 163726608 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075409.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163724544 163727424 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075410.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163726996 163728558 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075411.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163729259 163732353 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075412.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163736255 163737412 - Tecpr1 protein_coding processed_transcript MGP_NODShiLtJ_T0075413.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163740967 163747050 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075414.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163740976 163754873 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075415.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163743689 163754927 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075416.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163749640 163754879 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0075417.1 MGP_NODShiLtJ_G0030150.1 mouse_genomes_project 5 163751708 163754844 - Tecpr1 protein_coding retained_intron MGP_NODShiLtJ_T0069672.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 828105 858140 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0069673.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 828229 864455 + MGP_NODShiLtJ_P0069673 Akap9 protein_coding protein_coding MGP_NODShiLtJ_T0069674.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 828325 852273 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0069675.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 828325 1000923 + MGP_NODShiLtJ_P0069675 Akap9 protein_coding protein_coding MGP_NODShiLtJ_T0069676.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 854591 861066 + Akap9 protein_coding processed_transcript MGP_NODShiLtJ_T0069677.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 854602 855272 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0069678.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 858089 861122 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0069679.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 876684 885964 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0069680.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 880326 881246 + MGP_NODShiLtJ_P0069680 Akap9 protein_coding protein_coding MGP_NODShiLtJ_T0069681.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 936468 938631 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0069682.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 961946 963625 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0069683.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 967210 968299 + MGP_NODShiLtJ_P0069683 Akap9 protein_coding protein_coding MGP_NODShiLtJ_T0069684.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 967332 967812 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0069685.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 968218 973334 + MGP_NODShiLtJ_P0069685 Akap9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069686.1 MGP_NODShiLtJ_G0029069.1 mouse_genomes_project 5 970182 970733 + Akap9 protein_coding retained_intron MGP_NODShiLtJ_T0071037.1 MGP_NODShiLtJ_G0029300.1 mouse_genomes_project 5 38865013 38890571 - MGP_NODShiLtJ_P0071037 Wfs1 protein_coding protein_coding MGP_NODShiLtJ_T0071038.1 MGP_NODShiLtJ_G0029300.1 mouse_genomes_project 5 38865016 38890299 - MGP_NODShiLtJ_P0071038 Wfs1 protein_coding protein_coding MGP_NODShiLtJ_T0071039.1 MGP_NODShiLtJ_G0029300.1 mouse_genomes_project 5 38867420 38875917 - MGP_NODShiLtJ_P0071039 Wfs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001604.1 MGP_NODShiLtJ_G0001519.1 mouse_genomes_project 5 73317573 73318487 + TEC TEC MGP_NODShiLtJ_T0007988.1 MGP_NODShiLtJ_G0006514.1 mouse_genomes_project 5 24017990 24019519 + 4930580E04Rik lincRNA lincRNA MGP_NODShiLtJ_T0011490.1 MGP_NODShiLtJ_G0009623.1 mouse_genomes_project 5 114909962 114910031 + Gm27997 misc_RNA misc_RNA MGP_NODShiLtJ_T0072160.1 MGP_NODShiLtJ_G0029518.1 mouse_genomes_project 5 102572023 102785182 - MGP_NODShiLtJ_P0072160 Adamts3 protein_coding protein_coding MGP_NODShiLtJ_T0072161.1 MGP_NODShiLtJ_G0029518.1 mouse_genomes_project 5 102572023 102785182 - MGP_NODShiLtJ_P0072161 Adamts3 protein_coding protein_coding MGP_NODShiLtJ_T0072162.1 MGP_NODShiLtJ_G0029518.1 mouse_genomes_project 5 102736579 102785581 - MGP_NODShiLtJ_P0072162 Adamts3 protein_coding protein_coding MGP_NODShiLtJ_T0072163.1 MGP_NODShiLtJ_G0029518.1 mouse_genomes_project 5 102763927 102784394 - Adamts3 protein_coding processed_transcript MGP_NODShiLtJ_T0001532.1 MGP_NODShiLtJ_G0001448.1 mouse_genomes_project 5 52413648 52414956 - TEC TEC MGP_NODShiLtJ_T0070722.1 MGP_NODShiLtJ_G0029252.1 mouse_genomes_project 5 35267943 35270111 + MGP_NODShiLtJ_P0070722 Gm9903 protein_coding protein_coding MGP_NODShiLtJ_T0069958.1 MGP_NODShiLtJ_G0029116.1 mouse_genomes_project 5 21744584 21887282 - MGP_NODShiLtJ_P0069958 Ccdc146 protein_coding protein_coding MGP_NODShiLtJ_T0069959.1 MGP_NODShiLtJ_G0029116.1 mouse_genomes_project 5 21768990 21887282 - MGP_NODShiLtJ_P0069959 Ccdc146 protein_coding protein_coding MGP_NODShiLtJ_T0069960.1 MGP_NODShiLtJ_G0029116.1 mouse_genomes_project 5 21769273 21786938 - Ccdc146 protein_coding retained_intron MGP_NODShiLtJ_T0069961.1 MGP_NODShiLtJ_G0029116.1 mouse_genomes_project 5 21770183 21778944 - Ccdc146 protein_coding retained_intron MGP_NODShiLtJ_T0069962.1 MGP_NODShiLtJ_G0029116.1 mouse_genomes_project 5 21778997 21787152 - Ccdc146 protein_coding processed_transcript MGP_NODShiLtJ_T0075662.1 MGP_NODShiLtJ_G0030207.1 mouse_genomes_project 5 169410258 169418405 - MGP_NODShiLtJ_P0075662 Hmgb1 protein_coding protein_coding MGP_NODShiLtJ_T0075663.1 MGP_NODShiLtJ_G0030207.1 mouse_genomes_project 5 169412603 169577880 - MGP_NODShiLtJ_P0075663 Hmgb1 protein_coding protein_coding MGP_NODShiLtJ_T0075664.1 MGP_NODShiLtJ_G0030207.1 mouse_genomes_project 5 169413906 169415199 - Hmgb1 protein_coding retained_intron MGP_NODShiLtJ_T0075665.1 MGP_NODShiLtJ_G0030207.1 mouse_genomes_project 5 169414153 169418376 - MGP_NODShiLtJ_P0075665 Hmgb1 protein_coding protein_coding MGP_NODShiLtJ_T0075666.1 MGP_NODShiLtJ_G0030207.1 mouse_genomes_project 5 169414575 169417722 - MGP_NODShiLtJ_P0075666 Hmgb1 protein_coding protein_coding MGP_NODShiLtJ_T0075667.1 MGP_NODShiLtJ_G0030207.1 mouse_genomes_project 5 169414819 169418381 - Hmgb1 protein_coding retained_intron MGP_NODShiLtJ_T0075668.1 MGP_NODShiLtJ_G0030207.1 mouse_genomes_project 5 169415066 169418877 - MGP_NODShiLtJ_P0075668 Hmgb1 protein_coding protein_coding MGP_NODShiLtJ_T0075669.1 MGP_NODShiLtJ_G0030207.1 mouse_genomes_project 5 169415124 169418346 - Hmgb1 protein_coding retained_intron MGP_NODShiLtJ_T0069868.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 11977787 12261829 + protein_coding processed_transcript MGP_NODShiLtJ_T0069869.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 11977865 12243218 + protein_coding retained_intron MGP_NODShiLtJ_T0069870.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 11977966 12560007 + protein_coding retained_intron MGP_NODShiLtJ_T0069871.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 12386527 12657787 + MGP_NODShiLtJ_P0069871 protein_coding protein_coding MGP_NODShiLtJ_T0069872.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 12393645 12457818 + MGP_NODShiLtJ_P0069872 protein_coding protein_coding MGP_NODShiLtJ_T0069873.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 12393954 12656147 + MGP_NODShiLtJ_P0069873 protein_coding protein_coding MGP_NODShiLtJ_T0069874.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 12394279 12659364 + MGP_NODShiLtJ_P0069874 protein_coding protein_coding MGP_NODShiLtJ_T0069875.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 12394294 12457788 + MGP_NODShiLtJ_P0069875 protein_coding protein_coding MGP_NODShiLtJ_T0069876.1 MGP_NODShiLtJ_G0029101.1 mouse_genomes_project 5 12394547 12512623 + protein_coding processed_transcript MGP_NODShiLtJ_T0015003.1 MGP_NODShiLtJ_G0013111.1 mouse_genomes_project 5 125191890 125194091 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001710.1 MGP_NODShiLtJ_G0001624.1 mouse_genomes_project 5 123095696 123097042 - TEC TEC MGP_NODShiLtJ_T0074835.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156245869 156248495 - MGP_NODShiLtJ_P0074835 Gnb2 protein_coding protein_coding MGP_NODShiLtJ_T0074836.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156245871 156246664 - Gnb2 protein_coding retained_intron MGP_NODShiLtJ_T0074837.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156245900 156250605 - MGP_NODShiLtJ_P0074837 Gnb2 protein_coding protein_coding MGP_NODShiLtJ_T0074838.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156246246 156252026 - MGP_NODShiLtJ_P0074838 Gnb2 protein_coding protein_coding MGP_NODShiLtJ_T0074839.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156246308 156248643 - Gnb2 protein_coding retained_intron MGP_NODShiLtJ_T0074840.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156246515 156247606 - Gnb2 protein_coding retained_intron MGP_NODShiLtJ_T0074841.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156246539 156247564 - Gnb2 protein_coding retained_intron MGP_NODShiLtJ_T0074842.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156246616 156247520 - Gnb2 protein_coding retained_intron MGP_NODShiLtJ_T0074843.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156246763 156248782 - MGP_NODShiLtJ_P0074843 Gnb2 protein_coding protein_coding MGP_NODShiLtJ_T0074844.1 MGP_NODShiLtJ_G0030032.1 mouse_genomes_project 5 156246881 156250799 - MGP_NODShiLtJ_P0074844 Gnb2 protein_coding protein_coding MGP_NODShiLtJ_T0098405.1 MGP_NODShiLtJ_G0036810.1 mouse_genomes_project 5 115342470 115342894 - Gm43514 sense_intronic sense_intronic MGP_NODShiLtJ_T0099341.1 MGP_NODShiLtJ_G0037735.1 mouse_genomes_project 5 30596153 30596260 - Gm24538 snRNA snRNA MGP_NODShiLtJ_T0001758.1 MGP_NODShiLtJ_G0001672.1 mouse_genomes_project 5 138108086 138110391 - TEC TEC MGP_NODShiLtJ_T0001739.1 MGP_NODShiLtJ_G0001653.1 mouse_genomes_project 5 132984877 132986340 - TEC TEC MGP_NODShiLtJ_T0001408.1 MGP_NODShiLtJ_G0001327.1 mouse_genomes_project 5 6137319 6140704 - TEC TEC MGP_NODShiLtJ_T0015093.1 MGP_NODShiLtJ_G0013201.1 mouse_genomes_project 5 167593347 167593569 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072523.1 MGP_NODShiLtJ_G0029596.1 mouse_genomes_project 5 116254595 116261414 - MGP_NODShiLtJ_P0072523 Nkx6-1 protein_coding protein_coding MGP_NODShiLtJ_T0001573.1 MGP_NODShiLtJ_G0001489.1 mouse_genomes_project 5 63212497 63215246 + TEC TEC MGP_NODShiLtJ_T0101957.1 MGP_NODShiLtJ_G0040125.1 mouse_genomes_project 5 99814696 99816389 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0075565.1 MGP_NODShiLtJ_G0030188.1 mouse_genomes_project 5 166926239 166928877 + MGP_NODShiLtJ_P0075565 Rasl11a protein_coding protein_coding MGP_NODShiLtJ_T0075566.1 MGP_NODShiLtJ_G0030188.1 mouse_genomes_project 5 166926917 166928536 + Rasl11a protein_coding retained_intron MGP_NODShiLtJ_T0071248.1 MGP_NODShiLtJ_G0029337.1 mouse_genomes_project 5 48329180 48336323 + MGP_NODShiLtJ_P0071248 Med28 protein_coding protein_coding MGP_NODShiLtJ_T0071249.1 MGP_NODShiLtJ_G0029337.1 mouse_genomes_project 5 48329211 48336075 + MGP_NODShiLtJ_P0071249 Med28 protein_coding protein_coding MGP_NODShiLtJ_T0071250.1 MGP_NODShiLtJ_G0029337.1 mouse_genomes_project 5 48329892 48336330 + Med28 protein_coding processed_transcript MGP_NODShiLtJ_T0071251.1 MGP_NODShiLtJ_G0029337.1 mouse_genomes_project 5 48331058 48335903 + Med28 protein_coding retained_intron MGP_NODShiLtJ_T0072073.1 MGP_NODShiLtJ_G0029484.1 mouse_genomes_project 5 99723186 99736713 - MGP_NODShiLtJ_P0072073 Ugt2a3 protein_coding protein_coding MGP_NODShiLtJ_T0070289.1 MGP_NODShiLtJ_G0029183.1 mouse_genomes_project 5 31245714 31259947 - MGP_NODShiLtJ_P0070289 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070290.1 MGP_NODShiLtJ_G0029183.1 mouse_genomes_project 5 31246686 31260014 - protein_coding retained_intron MGP_NODShiLtJ_T0070291.1 MGP_NODShiLtJ_G0029183.1 mouse_genomes_project 5 31246686 31259969 - MGP_NODShiLtJ_P0070291 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070292.1 MGP_NODShiLtJ_G0029183.1 mouse_genomes_project 5 31246698 31259981 - MGP_NODShiLtJ_P0070292 protein_coding protein_coding MGP_NODShiLtJ_T0070293.1 MGP_NODShiLtJ_G0029183.1 mouse_genomes_project 5 31247935 31259952 - MGP_NODShiLtJ_P0070293 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070294.1 MGP_NODShiLtJ_G0029183.1 mouse_genomes_project 5 31248545 31259986 - protein_coding retained_intron MGP_NODShiLtJ_T0070295.1 MGP_NODShiLtJ_G0029183.1 mouse_genomes_project 5 31248802 31259976 - MGP_NODShiLtJ_P0070295 protein_coding protein_coding MGP_NODShiLtJ_T0070296.1 MGP_NODShiLtJ_G0029183.1 mouse_genomes_project 5 31252590 31259922 - protein_coding processed_transcript MGP_NODShiLtJ_T0001492.1 MGP_NODShiLtJ_G0001408.1 mouse_genomes_project 5 46404814 46406177 - TEC TEC MGP_NODShiLtJ_T0070577.1 MGP_NODShiLtJ_G0029229.1 mouse_genomes_project 5 32802218 32820380 + MGP_NODShiLtJ_P0070577 Gpn1 protein_coding protein_coding MGP_NODShiLtJ_T0070578.1 MGP_NODShiLtJ_G0029229.1 mouse_genomes_project 5 32802229 32810495 + Gpn1 protein_coding retained_intron MGP_NODShiLtJ_T0070579.1 MGP_NODShiLtJ_G0029229.1 mouse_genomes_project 5 32802230 32805194 + MGP_NODShiLtJ_P0070579 Gpn1 protein_coding protein_coding MGP_NODShiLtJ_T0070580.1 MGP_NODShiLtJ_G0029229.1 mouse_genomes_project 5 32802244 32806753 + MGP_NODShiLtJ_P0070580 Gpn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070581.1 MGP_NODShiLtJ_G0029229.1 mouse_genomes_project 5 32802271 32811001 + Gpn1 protein_coding retained_intron MGP_NODShiLtJ_T0070582.1 MGP_NODShiLtJ_G0029229.1 mouse_genomes_project 5 32802478 32804802 + Gpn1 protein_coding processed_transcript MGP_NODShiLtJ_T0070583.1 MGP_NODShiLtJ_G0029229.1 mouse_genomes_project 5 32814536 32818335 + Gpn1 protein_coding retained_intron MGP_NODShiLtJ_T0004708.1 MGP_NODShiLtJ_G0004061.1 mouse_genomes_project 5 122679862 122706937 - Gm17202 antisense antisense MGP_NODShiLtJ_T0071863.1 MGP_NODShiLtJ_G0029441.1 mouse_genomes_project 5 84559062 84640944 + MGP_NODShiLtJ_P0071863 Kit protein_coding protein_coding MGP_NODShiLtJ_T0071864.1 MGP_NODShiLtJ_G0029441.1 mouse_genomes_project 5 84559101 84640944 + MGP_NODShiLtJ_P0071864 Kit protein_coding protein_coding MGP_NODShiLtJ_T0071865.1 MGP_NODShiLtJ_G0029441.1 mouse_genomes_project 5 84596712 84607083 + Kit protein_coding retained_intron MGP_NODShiLtJ_T0071866.1 MGP_NODShiLtJ_G0029441.1 mouse_genomes_project 5 84623601 84625511 + Kit protein_coding retained_intron MGP_NODShiLtJ_T0071867.1 MGP_NODShiLtJ_G0029441.1 mouse_genomes_project 5 84627537 84630216 + Kit protein_coding retained_intron MGP_NODShiLtJ_T0071868.1 MGP_NODShiLtJ_G0029441.1 mouse_genomes_project 5 84629928 84637078 + Kit protein_coding retained_intron MGP_NODShiLtJ_T0071869.1 MGP_NODShiLtJ_G0029441.1 mouse_genomes_project 5 84633323 84640916 + Kit protein_coding retained_intron MGP_NODShiLtJ_T0071870.1 MGP_NODShiLtJ_G0029441.1 mouse_genomes_project 5 84633422 84636518 + Kit protein_coding retained_intron MGP_NODShiLtJ_T0073413.1 MGP_NODShiLtJ_G0029782.1 mouse_genomes_project 5 133053863 133070848 - MGP_NODShiLtJ_P0073413 Srrm4 protein_coding protein_coding MGP_NODShiLtJ_T0073414.1 MGP_NODShiLtJ_G0029782.1 mouse_genomes_project 5 133053873 133070972 - Srrm4 protein_coding retained_intron MGP_NODShiLtJ_T0073415.1 MGP_NODShiLtJ_G0029782.1 mouse_genomes_project 5 133053874 133230263 - MGP_NODShiLtJ_P0073415 Srrm4 protein_coding protein_coding MGP_NODShiLtJ_T0073416.1 MGP_NODShiLtJ_G0029782.1 mouse_genomes_project 5 133096805 133097584 - Srrm4 protein_coding retained_intron MGP_NODShiLtJ_T0072493.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115276090 115313469 - MGP_NODShiLtJ_P0072493 Helq protein_coding protein_coding MGP_NODShiLtJ_T0072494.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115276096 115279384 - Helq protein_coding retained_intron MGP_NODShiLtJ_T0072495.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115276392 115313339 - MGP_NODShiLtJ_P0072495 Helq protein_coding protein_coding MGP_NODShiLtJ_T0072496.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115276401 115280759 - Helq protein_coding retained_intron MGP_NODShiLtJ_T0072497.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115280682 115287982 - MGP_NODShiLtJ_P0072497 Helq protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072498.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115285493 115288066 - Helq protein_coding retained_intron MGP_NODShiLtJ_T0072499.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115292330 115297863 - Helq protein_coding retained_intron MGP_NODShiLtJ_T0072500.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115297961 115307597 - Helq protein_coding processed_transcript MGP_NODShiLtJ_T0072501.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115298042 115313448 - MGP_NODShiLtJ_P0072501 Helq protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072502.1 MGP_NODShiLtJ_G0029592.1 mouse_genomes_project 5 115306642 115307923 - Helq protein_coding retained_intron MGP_NODShiLtJ_T0073697.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139151662 139374899 - MGP_NODShiLtJ_P0073697 protein_coding protein_coding MGP_NODShiLtJ_T0073698.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139157011 139372873 - MGP_NODShiLtJ_P0073698 protein_coding protein_coding MGP_NODShiLtJ_T0073699.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139157103 139164582 - protein_coding retained_intron MGP_NODShiLtJ_T0073700.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139157103 139238934 - MGP_NODShiLtJ_P0073700 protein_coding protein_coding MGP_NODShiLtJ_T0073701.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139173439 139174675 - protein_coding retained_intron MGP_NODShiLtJ_T0073702.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139180165 139222437 - protein_coding processed_transcript MGP_NODShiLtJ_T0073703.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139180171 139197866 - protein_coding processed_transcript MGP_NODShiLtJ_T0073704.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139186730 139375150 - MGP_NODShiLtJ_P0073704 protein_coding protein_coding MGP_NODShiLtJ_T0073705.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139189397 139323085 - MGP_NODShiLtJ_P0073705 protein_coding protein_coding MGP_NODShiLtJ_T0073706.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139197893 139225884 - protein_coding processed_transcript MGP_NODShiLtJ_T0073707.1 MGP_NODShiLtJ_G0029840.1 mouse_genomes_project 5 139238908 139372939 - protein_coding processed_transcript MGP_NODShiLtJ_T0008099.1 MGP_NODShiLtJ_G0006593.1 mouse_genomes_project 5 83651614 83654548 - Gm15985 lincRNA lincRNA MGP_NODShiLtJ_T0074133.1 MGP_NODShiLtJ_G0029904.1 mouse_genomes_project 5 142271671 142389838 + MGP_NODShiLtJ_P0074133 Dnah10 protein_coding protein_coding MGP_NODShiLtJ_T0074134.1 MGP_NODShiLtJ_G0029904.1 mouse_genomes_project 5 142271671 142389843 + MGP_NODShiLtJ_P0074134 Dnah10 protein_coding protein_coding MGP_NODShiLtJ_T0074135.1 MGP_NODShiLtJ_G0029904.1 mouse_genomes_project 5 142340293 142340724 + Dnah10 protein_coding processed_transcript MGP_NODShiLtJ_T0074136.1 MGP_NODShiLtJ_G0029904.1 mouse_genomes_project 5 142345129 142350973 + Dnah10 protein_coding processed_transcript MGP_NODShiLtJ_T0074137.1 MGP_NODShiLtJ_G0029904.1 mouse_genomes_project 5 142356097 142359321 + Dnah10 protein_coding retained_intron MGP_NODShiLtJ_T0074138.1 MGP_NODShiLtJ_G0029904.1 mouse_genomes_project 5 142359972 142389660 + Dnah10 protein_coding retained_intron MGP_NODShiLtJ_T0004599.1 MGP_NODShiLtJ_G0003981.1 mouse_genomes_project 5 32792244 32793564 - 4930566F21Rik antisense antisense MGP_NODShiLtJ_T0004600.1 MGP_NODShiLtJ_G0003981.1 mouse_genomes_project 5 32792248 32802657 - 4930566F21Rik antisense antisense MGP_NODShiLtJ_T0075469.1 MGP_NODShiLtJ_G0030160.1 mouse_genomes_project 5 164794942 164806241 - MGP_NODShiLtJ_P0075469 Pdap1 protein_coding protein_coding MGP_NODShiLtJ_T0075470.1 MGP_NODShiLtJ_G0030160.1 mouse_genomes_project 5 164796258 164802699 - Pdap1 protein_coding processed_transcript MGP_NODShiLtJ_T0075471.1 MGP_NODShiLtJ_G0030160.1 mouse_genomes_project 5 164797545 164801647 - Pdap1 protein_coding retained_intron MGP_NODShiLtJ_T0075472.1 MGP_NODShiLtJ_G0030160.1 mouse_genomes_project 5 164799349 164801801 - Pdap1 protein_coding retained_intron MGP_NODShiLtJ_T0075473.1 MGP_NODShiLtJ_G0030160.1 mouse_genomes_project 5 164802580 164806001 - Pdap1 protein_coding retained_intron MGP_NODShiLtJ_T0010589.1 MGP_NODShiLtJ_G0008722.1 mouse_genomes_project 5 100073330 100073422 - Mir3969 miRNA miRNA MGP_NODShiLtJ_T0072035.1 MGP_NODShiLtJ_G0029469.1 mouse_genomes_project 5 98357285 98382732 - MGP_NODShiLtJ_P0072035 Gnrhr protein_coding protein_coding MGP_NODShiLtJ_T0072036.1 MGP_NODShiLtJ_G0029469.1 mouse_genomes_project 5 98358526 98382701 - MGP_NODShiLtJ_P0072036 Gnrhr protein_coding protein_coding MGP_NODShiLtJ_T0072037.1 MGP_NODShiLtJ_G0029469.1 mouse_genomes_project 5 98369953 98382677 - MGP_NODShiLtJ_P0072037 Gnrhr protein_coding protein_coding MGP_NODShiLtJ_T0014998.1 MGP_NODShiLtJ_G0013106.1 mouse_genomes_project 5 124477038 124477412 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001458.1 MGP_NODShiLtJ_G0001375.1 mouse_genomes_project 5 32764194 32765582 + TEC TEC MGP_NODShiLtJ_T0014851.1 MGP_NODShiLtJ_G0012959.1 mouse_genomes_project 5 51238266 51238564 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073148.1 MGP_NODShiLtJ_G0029733.1 mouse_genomes_project 5 130436856 130445794 + MGP_NODShiLtJ_P0073148 Ung protein_coding protein_coding MGP_NODShiLtJ_T0073149.1 MGP_NODShiLtJ_G0029733.1 mouse_genomes_project 5 130437699 130445798 + MGP_NODShiLtJ_P0073149 Ung protein_coding protein_coding MGP_NODShiLtJ_T0073150.1 MGP_NODShiLtJ_G0029733.1 mouse_genomes_project 5 130437699 130444849 + MGP_NODShiLtJ_P0073150 Ung protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073151.1 MGP_NODShiLtJ_G0029733.1 mouse_genomes_project 5 130438478 130444774 + MGP_NODShiLtJ_P0073151 Ung protein_coding protein_coding MGP_NODShiLtJ_T0073152.1 MGP_NODShiLtJ_G0029733.1 mouse_genomes_project 5 130438550 130441649 + Ung protein_coding retained_intron MGP_NODShiLtJ_T0001848.1 MGP_NODShiLtJ_G0001760.1 mouse_genomes_project 5 157803880 157804671 + TEC TEC MGP_NODShiLtJ_T0073782.1 MGP_NODShiLtJ_G0029853.1 mouse_genomes_project 5 139808934 139859164 - MGP_NODShiLtJ_P0073782 Atp2a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073783.1 MGP_NODShiLtJ_G0029853.1 mouse_genomes_project 5 139808935 139858885 - MGP_NODShiLtJ_P0073783 Atp2a2 protein_coding protein_coding MGP_NODShiLtJ_T0073784.1 MGP_NODShiLtJ_G0029853.1 mouse_genomes_project 5 139811767 139859215 - MGP_NODShiLtJ_P0073784 Atp2a2 protein_coding protein_coding MGP_NODShiLtJ_T0073785.1 MGP_NODShiLtJ_G0029853.1 mouse_genomes_project 5 139845881 139858605 - Atp2a2 protein_coding processed_transcript MGP_NODShiLtJ_T0073786.1 MGP_NODShiLtJ_G0029853.1 mouse_genomes_project 5 139845934 139858601 - Atp2a2 protein_coding retained_intron MGP_NODShiLtJ_T0098051.1 MGP_NODShiLtJ_G0036463.1 mouse_genomes_project 5 122674656 122674775 + n-R5s173 rRNA rRNA MGP_NODShiLtJ_T0070683.1 MGP_NODShiLtJ_G0029244.1 mouse_genomes_project 5 34584295 34596218 + MGP_NODShiLtJ_P0070683 protein_coding protein_coding MGP_NODShiLtJ_T0070684.1 MGP_NODShiLtJ_G0029244.1 mouse_genomes_project 5 34584357 34586538 + protein_coding retained_intron MGP_NODShiLtJ_T0001617.1 MGP_NODShiLtJ_G0001532.1 mouse_genomes_project 5 74050851 74053235 - TEC TEC MGP_NODShiLtJ_T0075773.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171626753 171787043 - MGP_NODShiLtJ_P0075773 Stard13 protein_coding protein_coding MGP_NODShiLtJ_T0075774.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171628780 171786943 - MGP_NODShiLtJ_P0075774 Stard13 protein_coding protein_coding MGP_NODShiLtJ_T0075775.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171652551 171787049 - Stard13 protein_coding processed_transcript MGP_NODShiLtJ_T0075776.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171652652 171678881 - Stard13 protein_coding processed_transcript MGP_NODShiLtJ_T0075778.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171652655 171834640 - MGP_NODShiLtJ_P0075778 Stard13 protein_coding protein_coding MGP_NODShiLtJ_T0075779.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171652702 171687097 - Stard13 protein_coding processed_transcript MGP_NODShiLtJ_T0075780.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171660901 171786999 - Stard13 protein_coding retained_intron MGP_NODShiLtJ_T0075781.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171662941 171834702 - MGP_NODShiLtJ_P0075781 Stard13 protein_coding protein_coding MGP_NODShiLtJ_T0075782.1 MGP_NODShiLtJ_G0030223.1 mouse_genomes_project 5 171686770 171700049 - Stard13 protein_coding processed_transcript MGP_NODShiLtJ_T0008384.1 MGP_NODShiLtJ_G0006793.1 mouse_genomes_project 5 169505687 169576894 - 5730422E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0008385.1 MGP_NODShiLtJ_G0006793.1 mouse_genomes_project 5 169505691 169510398 - 5730422E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0074637.1 MGP_NODShiLtJ_G0029995.1 mouse_genomes_project 5 154415866 154442637 - MGP_NODShiLtJ_P0074637 Ywhag protein_coding protein_coding MGP_NODShiLtJ_T0074638.1 MGP_NODShiLtJ_G0029995.1 mouse_genomes_project 5 154415866 154442592 - MGP_NODShiLtJ_P0074638 Ywhag protein_coding protein_coding MGP_NODShiLtJ_T0074639.1 MGP_NODShiLtJ_G0029995.1 mouse_genomes_project 5 154438802 154442635 - Ywhag protein_coding retained_intron MGP_NODShiLtJ_T0074640.1 MGP_NODShiLtJ_G0029995.1 mouse_genomes_project 5 154438807 154442654 - Ywhag protein_coding processed_transcript MGP_NODShiLtJ_T0074641.1 MGP_NODShiLtJ_G0029995.1 mouse_genomes_project 5 154438883 154442588 - Ywhag protein_coding processed_transcript MGP_NODShiLtJ_T0007985.1 MGP_NODShiLtJ_G0006513.1 mouse_genomes_project 5 23282553 23290574 - A930003O13Rik lincRNA lincRNA MGP_NODShiLtJ_T0007986.1 MGP_NODShiLtJ_G0006513.1 mouse_genomes_project 5 23283017 23286153 - A930003O13Rik lincRNA lincRNA MGP_NODShiLtJ_T0007987.1 MGP_NODShiLtJ_G0006513.1 mouse_genomes_project 5 23287708 23290594 - A930003O13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008368.1 MGP_NODShiLtJ_G0006779.1 mouse_genomes_project 5 166871436 166881955 + Gm43741 lincRNA lincRNA MGP_NODShiLtJ_T0001776.1 MGP_NODShiLtJ_G0001690.1 mouse_genomes_project 5 140877937 140880070 + TEC TEC MGP_NODShiLtJ_T0099382.1 MGP_NODShiLtJ_G0037776.1 mouse_genomes_project 5 121258313 121258420 - Gm25672 snRNA snRNA MGP_NODShiLtJ_T0075224.1 MGP_NODShiLtJ_G0030109.1 mouse_genomes_project 5 160018139 160022357 + Amz1 protein_coding processed_transcript MGP_NODShiLtJ_T0075225.1 MGP_NODShiLtJ_G0030109.1 mouse_genomes_project 5 160018139 160054260 + MGP_NODShiLtJ_P0075225 Amz1 protein_coding protein_coding MGP_NODShiLtJ_T0075226.1 MGP_NODShiLtJ_G0030109.1 mouse_genomes_project 5 160018150 160018810 + Amz1 protein_coding processed_transcript MGP_NODShiLtJ_T0075227.1 MGP_NODShiLtJ_G0030109.1 mouse_genomes_project 5 160032170 160055641 + MGP_NODShiLtJ_P0075227 Amz1 protein_coding protein_coding MGP_NODShiLtJ_T0075228.1 MGP_NODShiLtJ_G0030109.1 mouse_genomes_project 5 160032211 160037868 + Amz1 protein_coding processed_transcript MGP_NODShiLtJ_T0075229.1 MGP_NODShiLtJ_G0030109.1 mouse_genomes_project 5 160041953 160047866 + Amz1 protein_coding retained_intron MGP_NODShiLtJ_T0075230.1 MGP_NODShiLtJ_G0030109.1 mouse_genomes_project 5 160050266 160062389 + MGP_NODShiLtJ_P0075230 Amz1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098047.1 MGP_NODShiLtJ_G0036459.1 mouse_genomes_project 5 72497292 72497411 + Gm25154 rRNA rRNA MGP_NODShiLtJ_T0004797.1 MGP_NODShiLtJ_G0004126.1 mouse_genomes_project 5 153366125 153381258 - Wbscr25 antisense antisense MGP_NODShiLtJ_T0004798.1 MGP_NODShiLtJ_G0004126.1 mouse_genomes_project 5 153372421 153380415 - Wbscr25 antisense antisense MGP_NODShiLtJ_T0074199.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145392210 145422442 - MGP_NODShiLtJ_P0074199 Slc15a4 protein_coding protein_coding MGP_NODShiLtJ_T0074200.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145392213 145422444 - MGP_NODShiLtJ_P0074200 Slc15a4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074201.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145392213 145422252 - MGP_NODShiLtJ_P0074201 Slc15a4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074202.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145393202 145409705 - MGP_NODShiLtJ_P0074202 Slc15a4 protein_coding protein_coding MGP_NODShiLtJ_T0074203.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145406955 145437713 - MGP_NODShiLtJ_P0074203 Slc15a4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074204.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145408806 145409632 - Slc15a4 protein_coding processed_transcript MGP_NODShiLtJ_T0074205.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145408806 145409632 - Slc15a4 protein_coding processed_transcript MGP_NODShiLtJ_T0074206.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145408832 145414377 - MGP_NODShiLtJ_P0074206 Slc15a4 protein_coding protein_coding MGP_NODShiLtJ_T0074207.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145409630 145421909 - Slc15a4 protein_coding processed_transcript MGP_NODShiLtJ_T0074208.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145413818 145437730 - MGP_NODShiLtJ_P0074208 Slc15a4 protein_coding protein_coding MGP_NODShiLtJ_T0074209.1 MGP_NODShiLtJ_G0029917.1 mouse_genomes_project 5 145419473 145422407 - Slc15a4 protein_coding retained_intron MGP_NODShiLtJ_T0070766.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35498451 35593305 + MGP_NODShiLtJ_P0070766 Whsc1 protein_coding protein_coding MGP_NODShiLtJ_T0070767.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35498470 35565866 + MGP_NODShiLtJ_P0070767 Whsc1 protein_coding protein_coding MGP_NODShiLtJ_T0070768.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35498555 35525190 + MGP_NODShiLtJ_P0070768 Whsc1 protein_coding protein_coding MGP_NODShiLtJ_T0070769.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35522119 35593314 + MGP_NODShiLtJ_P0070769 Whsc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070770.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35522119 35570646 + MGP_NODShiLtJ_P0070770 Whsc1 protein_coding protein_coding MGP_NODShiLtJ_T0070771.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35522119 35593314 + MGP_NODShiLtJ_P0070771 Whsc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070772.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35522119 35593305 + MGP_NODShiLtJ_P0070772 Whsc1 protein_coding protein_coding MGP_NODShiLtJ_T0070773.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35522148 35591051 + MGP_NODShiLtJ_P0070773 Whsc1 protein_coding protein_coding MGP_NODShiLtJ_T0070774.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35522203 35590834 + MGP_NODShiLtJ_P0070774 Whsc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070775.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35544391 35570654 + MGP_NODShiLtJ_P0070775 Whsc1 protein_coding protein_coding MGP_NODShiLtJ_T0070776.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35571578 35573444 + Whsc1 protein_coding retained_intron MGP_NODShiLtJ_T0070777.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35572514 35590765 + MGP_NODShiLtJ_P0070777 Whsc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070778.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35580826 35587013 + Whsc1 protein_coding retained_intron MGP_NODShiLtJ_T0070779.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35580840 35583044 + Whsc1 protein_coding retained_intron MGP_NODShiLtJ_T0070780.1 MGP_NODShiLtJ_G0029258.1 mouse_genomes_project 5 35587243 35590434 + Whsc1 protein_coding retained_intron MGP_NODShiLtJ_T0008259.1 MGP_NODShiLtJ_G0006705.1 mouse_genomes_project 5 134017651 134021815 - BC051077 lincRNA lincRNA MGP_NODShiLtJ_T0001452.1 MGP_NODShiLtJ_G0001370.1 mouse_genomes_project 5 31123091 31127095 - TEC TEC MGP_NODShiLtJ_T0073352.1 MGP_NODShiLtJ_G0029773.1 mouse_genomes_project 5 132043736 132049188 + MGP_NODShiLtJ_P0073352 Rplp0 protein_coding protein_coding MGP_NODShiLtJ_T0073353.1 MGP_NODShiLtJ_G0029773.1 mouse_genomes_project 5 132043806 132047085 + MGP_NODShiLtJ_P0073353 Rplp0 protein_coding protein_coding MGP_NODShiLtJ_T0073354.1 MGP_NODShiLtJ_G0029773.1 mouse_genomes_project 5 132043847 132045747 + MGP_NODShiLtJ_P0073354 Rplp0 protein_coding protein_coding MGP_NODShiLtJ_T0073355.1 MGP_NODShiLtJ_G0029773.1 mouse_genomes_project 5 132043892 132045604 + Rplp0 protein_coding retained_intron MGP_NODShiLtJ_T0008170.1 MGP_NODShiLtJ_G0006650.1 mouse_genomes_project 5 118028706 118031801 + lincRNA lincRNA MGP_NODShiLtJ_T0073504.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137066691 137150176 + MGP_NODShiLtJ_P0073504 Rbm19 protein_coding protein_coding MGP_NODShiLtJ_T0073505.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137066743 137069208 + Rbm19 protein_coding retained_intron MGP_NODShiLtJ_T0073506.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137066746 137150174 + MGP_NODShiLtJ_P0073506 Rbm19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073507.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137068822 137070520 + Rbm19 protein_coding retained_intron MGP_NODShiLtJ_T0073508.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137107963 137150166 + Rbm19 protein_coding processed_transcript MGP_NODShiLtJ_T0073509.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137113858 137149388 + Rbm19 protein_coding processed_transcript MGP_NODShiLtJ_T0073510.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137119501 137137435 + Rbm19 protein_coding processed_transcript MGP_NODShiLtJ_T0073511.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137121095 137150172 + Rbm19 protein_coding processed_transcript MGP_NODShiLtJ_T0073512.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137124270 137149185 + Rbm19 protein_coding processed_transcript MGP_NODShiLtJ_T0073513.1 MGP_NODShiLtJ_G0029800.1 mouse_genomes_project 5 137126895 137149164 + Rbm19 protein_coding processed_transcript MGP_NODShiLtJ_T0015061.1 MGP_NODShiLtJ_G0013169.1 mouse_genomes_project 5 158397367 158399198 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014912.1 MGP_NODShiLtJ_G0013020.1 mouse_genomes_project 5 83989169 83990723 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004790.1 MGP_NODShiLtJ_G0004120.1 mouse_genomes_project 5 150053820 150057309 + 4930563F08Rik antisense antisense MGP_NODShiLtJ_T0070044.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24395380 24446532 - MGP_NODShiLtJ_P0070044 Pus7 protein_coding protein_coding MGP_NODShiLtJ_T0070045.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24395381 24446374 - MGP_NODShiLtJ_P0070045 Pus7 protein_coding protein_coding MGP_NODShiLtJ_T0070046.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24395388 24442421 - MGP_NODShiLtJ_P0070046 Pus7 protein_coding protein_coding MGP_NODShiLtJ_T0070047.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24396577 24446486 - MGP_NODShiLtJ_P0070047 Pus7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070048.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24397970 24405790 - Pus7 protein_coding processed_transcript MGP_NODShiLtJ_T0070049.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24399047 24422871 - MGP_NODShiLtJ_P0070049 Pus7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070050.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24405052 24422908 - Pus7 protein_coding processed_transcript MGP_NODShiLtJ_T0070051.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24406209 24413095 - Pus7 protein_coding processed_transcript MGP_NODShiLtJ_T0070052.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24420780 24441236 - MGP_NODShiLtJ_P0070052 Pus7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070053.1 MGP_NODShiLtJ_G0029133.1 mouse_genomes_project 5 24434007 24436933 - Pus7 protein_coding retained_intron MGP_NODShiLtJ_T0074554.1 MGP_NODShiLtJ_G0029977.1 mouse_genomes_project 5 153564307 153580100 + MGP_NODShiLtJ_P0074554 Tbl2 protein_coding protein_coding MGP_NODShiLtJ_T0074555.1 MGP_NODShiLtJ_G0029977.1 mouse_genomes_project 5 153564336 153574165 + MGP_NODShiLtJ_P0074555 Tbl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074556.1 MGP_NODShiLtJ_G0029977.1 mouse_genomes_project 5 153564336 153571942 + MGP_NODShiLtJ_P0074556 Tbl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074557.1 MGP_NODShiLtJ_G0029977.1 mouse_genomes_project 5 153564341 153569053 + MGP_NODShiLtJ_P0074557 Tbl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074558.1 MGP_NODShiLtJ_G0029977.1 mouse_genomes_project 5 153567368 153571980 + MGP_NODShiLtJ_P0074558 Tbl2 protein_coding protein_coding MGP_NODShiLtJ_T0008374.1 MGP_NODShiLtJ_G0006785.1 mouse_genomes_project 5 169072318 169073618 + 2210417A02Rik lincRNA lincRNA MGP_NODShiLtJ_T0098391.1 MGP_NODShiLtJ_G0036796.1 mouse_genomes_project 5 1931073 1933023 - Gm43111 sense_intronic sense_intronic MGP_NODShiLtJ_T0001735.1 MGP_NODShiLtJ_G0001649.1 mouse_genomes_project 5 131880263 131882163 - TEC TEC MGP_NODShiLtJ_T0001828.1 MGP_NODShiLtJ_G0001741.1 mouse_genomes_project 5 150672240 150675257 - TEC TEC MGP_NODShiLtJ_T0008293.1 MGP_NODShiLtJ_G0006728.1 mouse_genomes_project 5 141575640 141604711 - lincRNA lincRNA MGP_NODShiLtJ_T0072846.1 MGP_NODShiLtJ_G0029672.1 mouse_genomes_project 5 124940170 124983840 + MGP_NODShiLtJ_P0072846 Vmn2r16 protein_coding protein_coding MGP_NODShiLtJ_T0008183.1 MGP_NODShiLtJ_G0006658.1 mouse_genomes_project 5 121549890 121562590 + Gm42914 lincRNA lincRNA MGP_NODShiLtJ_T0072713.1 MGP_NODShiLtJ_G0029643.1 mouse_genomes_project 5 122829320 122872836 - MGP_NODShiLtJ_P0072713 Glmn protein_coding protein_coding MGP_NODShiLtJ_T0072714.1 MGP_NODShiLtJ_G0029643.1 mouse_genomes_project 5 122829322 122872774 - MGP_NODShiLtJ_P0072714 Glmn protein_coding protein_coding MGP_NODShiLtJ_T0072715.1 MGP_NODShiLtJ_G0029643.1 mouse_genomes_project 5 122829375 122831561 - Glmn protein_coding retained_intron MGP_NODShiLtJ_T0072716.1 MGP_NODShiLtJ_G0029643.1 mouse_genomes_project 5 122829376 122873048 - MGP_NODShiLtJ_P0072716 Glmn protein_coding protein_coding MGP_NODShiLtJ_T0072717.1 MGP_NODShiLtJ_G0029643.1 mouse_genomes_project 5 122829377 122872741 - MGP_NODShiLtJ_P0072717 Glmn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072718.1 MGP_NODShiLtJ_G0029643.1 mouse_genomes_project 5 122853323 122872763 - Glmn protein_coding processed_transcript MGP_NODShiLtJ_T0072719.1 MGP_NODShiLtJ_G0029643.1 mouse_genomes_project 5 122856332 122872836 - Glmn protein_coding processed_transcript MGP_NODShiLtJ_T0072720.1 MGP_NODShiLtJ_G0029643.1 mouse_genomes_project 5 122856366 122872743 - MGP_NODShiLtJ_P0072720 Glmn protein_coding protein_coding MGP_NODShiLtJ_T0072197.1 MGP_NODShiLtJ_G0029526.1 mouse_genomes_project 5 103605358 103646485 - MGP_NODShiLtJ_P0072197 Rassf6 protein_coding protein_coding MGP_NODShiLtJ_T0072198.1 MGP_NODShiLtJ_G0029526.1 mouse_genomes_project 5 103605358 103646485 - MGP_NODShiLtJ_P0072198 Rassf6 protein_coding protein_coding MGP_NODShiLtJ_T0072199.1 MGP_NODShiLtJ_G0029526.1 mouse_genomes_project 5 103605905 103612112 - MGP_NODShiLtJ_P0072199 Rassf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072200.1 MGP_NODShiLtJ_G0029526.1 mouse_genomes_project 5 103606113 103646652 - MGP_NODShiLtJ_P0072200 Rassf6 protein_coding protein_coding MGP_NODShiLtJ_T0072201.1 MGP_NODShiLtJ_G0029526.1 mouse_genomes_project 5 103621349 103646623 - MGP_NODShiLtJ_P0072201 Rassf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072202.1 MGP_NODShiLtJ_G0029526.1 mouse_genomes_project 5 103625886 103646522 - MGP_NODShiLtJ_P0072202 Rassf6 protein_coding protein_coding MGP_NODShiLtJ_T0072203.1 MGP_NODShiLtJ_G0029526.1 mouse_genomes_project 5 103642878 103646650 - Rassf6 protein_coding processed_transcript MGP_NODShiLtJ_T0073054.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129273136 129278400 - MGP_NODShiLtJ_P0073054 Crybb3 protein_coding protein_coding MGP_NODShiLtJ_T0073055.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129273136 129277957 - MGP_NODShiLtJ_P0073055 Crybb3 protein_coding protein_coding MGP_NODShiLtJ_T0073056.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129273136 129278874 - MGP_NODShiLtJ_P0073056 Crybb3 protein_coding protein_coding MGP_NODShiLtJ_T0073057.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129273140 129278400 - MGP_NODShiLtJ_P0073057 Crybb3 protein_coding protein_coding MGP_NODShiLtJ_T0073058.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129273144 129278873 - MGP_NODShiLtJ_P0073058 Crybb3 protein_coding protein_coding MGP_NODShiLtJ_T0073059.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129274318 129277681 - Crybb3 protein_coding retained_intron MGP_NODShiLtJ_T0073060.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129274583 129277956 - Crybb3 protein_coding retained_intron MGP_NODShiLtJ_T0073061.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129275681 129277943 - MGP_NODShiLtJ_P0073061 Crybb3 protein_coding protein_coding MGP_NODShiLtJ_T0073062.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129275764 129278869 - MGP_NODShiLtJ_P0073062 Crybb3 protein_coding protein_coding MGP_NODShiLtJ_T0073063.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129275830 129278870 - Crybb3 protein_coding processed_transcript MGP_NODShiLtJ_T0073064.1 MGP_NODShiLtJ_G0029715.1 mouse_genomes_project 5 129277046 129278349 - MGP_NODShiLtJ_P0073064 Crybb3 protein_coding protein_coding MGP_NODShiLtJ_T0001481.1 MGP_NODShiLtJ_G0001397.1 mouse_genomes_project 5 39073900 39076778 + TEC TEC MGP_NODShiLtJ_T0075173.1 MGP_NODShiLtJ_G0030098.1 mouse_genomes_project 5 159217724 159550783 - MGP_NODShiLtJ_P0075173 Mad1l1 protein_coding protein_coding MGP_NODShiLtJ_T0075174.1 MGP_NODShiLtJ_G0030098.1 mouse_genomes_project 5 159217724 159550781 - MGP_NODShiLtJ_P0075174 Mad1l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075175.1 MGP_NODShiLtJ_G0030098.1 mouse_genomes_project 5 159217729 159391465 - Mad1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0075176.1 MGP_NODShiLtJ_G0030098.1 mouse_genomes_project 5 159299790 159326580 - Mad1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0075177.1 MGP_NODShiLtJ_G0030098.1 mouse_genomes_project 5 159357047 159391206 - Mad1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0075178.1 MGP_NODShiLtJ_G0030098.1 mouse_genomes_project 5 159382467 159487012 - Mad1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0015023.1 MGP_NODShiLtJ_G0013131.1 mouse_genomes_project 5 131967910 131968411 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014894.1 MGP_NODShiLtJ_G0013002.1 mouse_genomes_project 5 71608496 71608995 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073753.1 MGP_NODShiLtJ_G0029848.1 mouse_genomes_project 5 139709136 139718493 + MGP_NODShiLtJ_P0073753 Vps29 protein_coding protein_coding MGP_NODShiLtJ_T0073754.1 MGP_NODShiLtJ_G0029848.1 mouse_genomes_project 5 139709157 139717699 + MGP_NODShiLtJ_P0073754 Vps29 protein_coding protein_coding MGP_NODShiLtJ_T0073755.1 MGP_NODShiLtJ_G0029848.1 mouse_genomes_project 5 139709160 139717444 + Vps29 protein_coding processed_transcript MGP_NODShiLtJ_T0073756.1 MGP_NODShiLtJ_G0029848.1 mouse_genomes_project 5 139709173 139718418 + MGP_NODShiLtJ_P0073756 Vps29 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073757.1 MGP_NODShiLtJ_G0029848.1 mouse_genomes_project 5 139709191 139717393 + MGP_NODShiLtJ_P0073757 Vps29 protein_coding protein_coding MGP_NODShiLtJ_T0073758.1 MGP_NODShiLtJ_G0029848.1 mouse_genomes_project 5 139709211 139717475 + MGP_NODShiLtJ_P0073758 Vps29 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073759.1 MGP_NODShiLtJ_G0029848.1 mouse_genomes_project 5 139709225 139719371 + MGP_NODShiLtJ_P0073759 Vps29 protein_coding protein_coding MGP_NODShiLtJ_T0073760.1 MGP_NODShiLtJ_G0029848.1 mouse_genomes_project 5 139712833 139716197 + Vps29 protein_coding retained_intron MGP_NODShiLtJ_T0069979.1 MGP_NODShiLtJ_G0029122.1 mouse_genomes_project 5 22138447 22181851 - MGP_NODShiLtJ_P0069979 Napepld protein_coding protein_coding MGP_NODShiLtJ_T0069980.1 MGP_NODShiLtJ_G0029122.1 mouse_genomes_project 5 22138449 22181853 - MGP_NODShiLtJ_P0069980 Napepld protein_coding protein_coding MGP_NODShiLtJ_T0014962.1 MGP_NODShiLtJ_G0013070.1 mouse_genomes_project 5 110163440 110163851 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072231.1 MGP_NODShiLtJ_G0029539.1 mouse_genomes_project 5 104580028 104704219 + MGP_NODShiLtJ_P0072231 Parm1 protein_coding protein_coding MGP_NODShiLtJ_T0001714.1 MGP_NODShiLtJ_G0001628.1 mouse_genomes_project 5 124019791 124021901 - TEC TEC MGP_NODShiLtJ_T0011500.1 MGP_NODShiLtJ_G0009633.1 mouse_genomes_project 5 128341915 128342050 - Gm27357 misc_RNA misc_RNA MGP_NODShiLtJ_T0001528.1 MGP_NODShiLtJ_G0001444.1 mouse_genomes_project 5 52202385 52203616 - TEC TEC MGP_NODShiLtJ_T0001761.1 MGP_NODShiLtJ_G0001675.1 mouse_genomes_project 5 138708453 138709542 + TEC TEC MGP_NODShiLtJ_T0008100.1 MGP_NODShiLtJ_G0006594.1 mouse_genomes_project 5 83670673 83675230 + Gm42575 lincRNA lincRNA MGP_NODShiLtJ_T0010592.1 MGP_NODShiLtJ_G0008725.1 mouse_genomes_project 5 106010196 106010308 - Mir1961 miRNA miRNA MGP_NODShiLtJ_T0010570.1 MGP_NODShiLtJ_G0008703.1 mouse_genomes_project 5 36511543 36511665 - Mir467g miRNA miRNA MGP_NODShiLtJ_T0069853.1 MGP_NODShiLtJ_G0029097.1 mouse_genomes_project 5 6959992 7203533 + MGP_NODShiLtJ_P0069853 9330182L06Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069854.1 MGP_NODShiLtJ_G0029097.1 mouse_genomes_project 5 6960001 7183728 + MGP_NODShiLtJ_P0069854 9330182L06Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069855.1 MGP_NODShiLtJ_G0029097.1 mouse_genomes_project 5 6960004 7126302 + 9330182L06Rik protein_coding retained_intron MGP_NODShiLtJ_T0069856.1 MGP_NODShiLtJ_G0029097.1 mouse_genomes_project 5 6960006 7204514 + MGP_NODShiLtJ_P0069856 9330182L06Rik protein_coding protein_coding MGP_NODShiLtJ_T0069857.1 MGP_NODShiLtJ_G0029097.1 mouse_genomes_project 5 6960006 7184112 + MGP_NODShiLtJ_P0069857 9330182L06Rik protein_coding protein_coding MGP_NODShiLtJ_T0069858.1 MGP_NODShiLtJ_G0029097.1 mouse_genomes_project 5 6960023 7206478 + MGP_NODShiLtJ_P0069858 9330182L06Rik protein_coding protein_coding MGP_NODShiLtJ_T0069859.1 MGP_NODShiLtJ_G0029097.1 mouse_genomes_project 5 6960049 7181615 + MGP_NODShiLtJ_P0069859 9330182L06Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069860.1 MGP_NODShiLtJ_G0029097.1 mouse_genomes_project 5 7136745 7141436 + 9330182L06Rik protein_coding retained_intron MGP_NODShiLtJ_T0014812.1 MGP_NODShiLtJ_G0012920.1 mouse_genomes_project 5 32249501 32254581 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071969.1 MGP_NODShiLtJ_G0029460.1 mouse_genomes_project 5 86412377 86437391 - MGP_NODShiLtJ_P0071969 Noa1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0071970.1 MGP_NODShiLtJ_G0029460.1 mouse_genomes_project 5 86412386 86437105 - MGP_NODShiLtJ_P0071970 Noa1 protein_coding protein_coding MGP_NODShiLtJ_T0071971.1 MGP_NODShiLtJ_G0029460.1 mouse_genomes_project 5 86432000 86437080 - Noa1 protein_coding retained_intron MGP_NODShiLtJ_T0071972.1 MGP_NODShiLtJ_G0029460.1 mouse_genomes_project 5 86432627 86434664 - Noa1 protein_coding processed_transcript MGP_NODShiLtJ_T0073195.1 MGP_NODShiLtJ_G0029741.1 mouse_genomes_project 5 130913735 130959860 + MGP_NODShiLtJ_P0073195 Fam222a protein_coding protein_coding MGP_NODShiLtJ_T0073196.1 MGP_NODShiLtJ_G0029741.1 mouse_genomes_project 5 130913736 130941259 + Fam222a protein_coding processed_transcript MGP_NODShiLtJ_T0074120.1 MGP_NODShiLtJ_G0029902.1 mouse_genomes_project 5 142182039 142201430 + MGP_NODShiLtJ_P0074120 Gtf2h3 protein_coding protein_coding MGP_NODShiLtJ_T0074121.1 MGP_NODShiLtJ_G0029902.1 mouse_genomes_project 5 142182041 142184572 + Gtf2h3 protein_coding retained_intron MGP_NODShiLtJ_T0074122.1 MGP_NODShiLtJ_G0029902.1 mouse_genomes_project 5 142182065 142196371 + Gtf2h3 protein_coding retained_intron MGP_NODShiLtJ_T0074123.1 MGP_NODShiLtJ_G0029902.1 mouse_genomes_project 5 142186745 142199346 + Gtf2h3 protein_coding retained_intron MGP_NODShiLtJ_T0074124.1 MGP_NODShiLtJ_G0029902.1 mouse_genomes_project 5 142194122 142200337 + Gtf2h3 protein_coding retained_intron MGP_NODShiLtJ_T0074125.1 MGP_NODShiLtJ_G0029902.1 mouse_genomes_project 5 142198014 142199355 + Gtf2h3 protein_coding retained_intron MGP_NODShiLtJ_T0001767.1 MGP_NODShiLtJ_G0001681.1 mouse_genomes_project 5 139734406 139734705 + TEC TEC MGP_NODShiLtJ_T0015100.1 MGP_NODShiLtJ_G0013208.1 mouse_genomes_project 5 170481715 170483225 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101944.1 MGP_NODShiLtJ_G0040112.1 mouse_genomes_project 5 16961670 16966638 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0072731.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123033221 123171415 - MGP_NODShiLtJ_P0072731 Evi5 protein_coding protein_coding MGP_NODShiLtJ_T0072732.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123035702 123099116 - Evi5 protein_coding retained_intron MGP_NODShiLtJ_T0072733.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123053764 123088111 - Evi5 protein_coding retained_intron MGP_NODShiLtJ_T0072734.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123076851 123164590 - MGP_NODShiLtJ_P0072734 Evi5 protein_coding protein_coding MGP_NODShiLtJ_T0072735.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123103903 123164590 - MGP_NODShiLtJ_P0072735 Evi5 protein_coding protein_coding MGP_NODShiLtJ_T0072736.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123105489 123107138 - Evi5 protein_coding retained_intron MGP_NODShiLtJ_T0072737.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123105939 123171352 - Evi5 protein_coding processed_transcript MGP_NODShiLtJ_T0072738.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123112030 123132168 - Evi5 protein_coding retained_intron MGP_NODShiLtJ_T0072740.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123144795 123171364 - Evi5 protein_coding processed_transcript MGP_NODShiLtJ_T0072741.1 MGP_NODShiLtJ_G0029646.1 mouse_genomes_project 5 123168052 123171360 - Evi5 protein_coding processed_transcript MGP_NODShiLtJ_T0074900.1 MGP_NODShiLtJ_G0030041.1 mouse_genomes_project 5 156370673 156374070 - MGP_NODShiLtJ_P0074900 Irs3 protein_coding protein_coding MGP_NODShiLtJ_T0074901.1 MGP_NODShiLtJ_G0030041.1 mouse_genomes_project 5 156370674 156374247 - MGP_NODShiLtJ_P0074901 Irs3 protein_coding protein_coding MGP_NODShiLtJ_T0004707.1 MGP_NODShiLtJ_G0004060.1 mouse_genomes_project 5 122665168 122678520 - Gm42902 antisense antisense MGP_NODShiLtJ_T0004773.1 MGP_NODShiLtJ_G0004108.1 mouse_genomes_project 5 141757418 141758339 + Pitpnm2os2 antisense antisense MGP_NODShiLtJ_T0004774.1 MGP_NODShiLtJ_G0004108.1 mouse_genomes_project 5 141757471 141762965 + Pitpnm2os2 antisense antisense MGP_NODShiLtJ_T0004775.1 MGP_NODShiLtJ_G0004108.1 mouse_genomes_project 5 141758153 141760626 + Pitpnm2os2 antisense antisense MGP_NODShiLtJ_T0011482.1 MGP_NODShiLtJ_G0009615.1 mouse_genomes_project 5 30845093 30845422 + Gm26346 misc_RNA misc_RNA MGP_NODShiLtJ_T0075198.1 MGP_NODShiLtJ_G0030105.1 mouse_genomes_project 5 159895396 159903616 + MGP_NODShiLtJ_P0075198 Lfng protein_coding protein_coding MGP_NODShiLtJ_T0075199.1 MGP_NODShiLtJ_G0030105.1 mouse_genomes_project 5 159899579 159901403 + Lfng protein_coding processed_transcript MGP_NODShiLtJ_T0075200.1 MGP_NODShiLtJ_G0030105.1 mouse_genomes_project 5 159899755 159902745 + Lfng protein_coding retained_intron MGP_NODShiLtJ_T0070498.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32430265 32435938 + MGP_NODShiLtJ_P0070498 Snx17 protein_coding protein_coding MGP_NODShiLtJ_T0070499.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32430280 32432473 + MGP_NODShiLtJ_P0070499 Snx17 protein_coding protein_coding MGP_NODShiLtJ_T0070500.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32430332 32435932 + MGP_NODShiLtJ_P0070500 Snx17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070501.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32430344 32435937 + Snx17 protein_coding retained_intron MGP_NODShiLtJ_T0070502.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32430344 32434094 + MGP_NODShiLtJ_P0070502 Snx17 protein_coding protein_coding MGP_NODShiLtJ_T0070503.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32430373 32435938 + MGP_NODShiLtJ_P0070503 Snx17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070504.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32430892 32436181 + Snx17 protein_coding retained_intron MGP_NODShiLtJ_T0070505.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32431881 32433472 + Snx17 protein_coding retained_intron MGP_NODShiLtJ_T0070506.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32432411 32434288 + Snx17 protein_coding retained_intron MGP_NODShiLtJ_T0070507.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32432879 32434748 + Snx17 protein_coding retained_intron MGP_NODShiLtJ_T0070508.1 MGP_NODShiLtJ_G0029218.1 mouse_genomes_project 5 32433087 32435182 + Snx17 protein_coding processed_transcript MGP_NODShiLtJ_T0070275.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30881622 30936046 + MGP_NODShiLtJ_P0070275 Dnajb6 protein_coding protein_coding MGP_NODShiLtJ_T0070276.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30881874 30913639 + MGP_NODShiLtJ_P0070276 Dnajb6 protein_coding protein_coding MGP_NODShiLtJ_T0070277.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30881923 30935208 + MGP_NODShiLtJ_P0070277 Dnajb6 protein_coding protein_coding MGP_NODShiLtJ_T0070278.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30881929 30904519 + MGP_NODShiLtJ_P0070278 Dnajb6 protein_coding protein_coding MGP_NODShiLtJ_T0070279.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30881958 30885024 + Dnajb6 protein_coding processed_transcript MGP_NODShiLtJ_T0070280.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30881967 30978344 + MGP_NODShiLtJ_P0070280 Dnajb6 protein_coding protein_coding MGP_NODShiLtJ_T0070281.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30883200 30894374 + MGP_NODShiLtJ_P0070281 Dnajb6 protein_coding protein_coding MGP_NODShiLtJ_T0070282.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30897274 30899291 + Dnajb6 protein_coding retained_intron MGP_NODShiLtJ_T0070283.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30900892 30904510 + Dnajb6 protein_coding processed_transcript MGP_NODShiLtJ_T0070284.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30910733 30912180 + Dnajb6 protein_coding retained_intron MGP_NODShiLtJ_T0070285.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30911027 30928193 + MGP_NODShiLtJ_P0070285 Dnajb6 protein_coding protein_coding MGP_NODShiLtJ_T0070286.1 MGP_NODShiLtJ_G0029181.1 mouse_genomes_project 5 30911742 30913223 + Dnajb6 protein_coding retained_intron MGP_NODShiLtJ_T0004799.1 MGP_NODShiLtJ_G0004127.1 mouse_genomes_project 5 153394995 153396135 - Abhd11os antisense antisense MGP_NODShiLtJ_T0004800.1 MGP_NODShiLtJ_G0004127.1 mouse_genomes_project 5 153395003 153396036 - Abhd11os antisense antisense MGP_NODShiLtJ_T0069668.1 MGP_NODShiLtJ_G0029067.1 mouse_genomes_project 5 702615 732269 + MGP_NODShiLtJ_P0069668 protein_coding protein_coding MGP_NODShiLtJ_T0069669.1 MGP_NODShiLtJ_G0029067.1 mouse_genomes_project 5 702629 713042 + MGP_NODShiLtJ_P0069669 protein_coding protein_coding MGP_NODShiLtJ_T0070575.1 MGP_NODShiLtJ_G0029228.1 mouse_genomes_project 5 32791355 32795099 + 4930548H24Rik protein_coding retained_intron MGP_NODShiLtJ_T0070576.1 MGP_NODShiLtJ_G0029228.1 mouse_genomes_project 5 32791474 32795099 + MGP_NODShiLtJ_P0070576 4930548H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0008143.1 MGP_NODShiLtJ_G0006632.1 mouse_genomes_project 5 111403966 111427374 + Gm33969 lincRNA lincRNA MGP_NODShiLtJ_T0075504.1 MGP_NODShiLtJ_G0030167.1 mouse_genomes_project 5 164907162 164923693 + MGP_NODShiLtJ_P0075504 Zfp655 protein_coding protein_coding MGP_NODShiLtJ_T0075505.1 MGP_NODShiLtJ_G0030167.1 mouse_genomes_project 5 164907194 164923692 + MGP_NODShiLtJ_P0075505 Zfp655 protein_coding protein_coding MGP_NODShiLtJ_T0075506.1 MGP_NODShiLtJ_G0030167.1 mouse_genomes_project 5 164907195 164912876 + MGP_NODShiLtJ_P0075506 Zfp655 protein_coding protein_coding MGP_NODShiLtJ_T0075507.1 MGP_NODShiLtJ_G0030167.1 mouse_genomes_project 5 164907196 164912746 + MGP_NODShiLtJ_P0075507 Zfp655 protein_coding protein_coding MGP_NODShiLtJ_T0075508.1 MGP_NODShiLtJ_G0030167.1 mouse_genomes_project 5 164908928 164912710 + MGP_NODShiLtJ_P0075508 Zfp655 protein_coding protein_coding MGP_NODShiLtJ_T0010606.1 MGP_NODShiLtJ_G0008739.1 mouse_genomes_project 5 135223688 135223780 - Gm26455 miRNA miRNA MGP_NODShiLtJ_T0073399.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132550758 132561780 - MGP_NODShiLtJ_P0073399 Prkab1 protein_coding protein_coding MGP_NODShiLtJ_T0073400.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132550762 132561826 - MGP_NODShiLtJ_P0073400 Prkab1 protein_coding protein_coding MGP_NODShiLtJ_T0073401.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132551339 132552334 - Prkab1 protein_coding retained_intron MGP_NODShiLtJ_T0073402.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132551488 132555462 - Prkab1 protein_coding retained_intron MGP_NODShiLtJ_T0073403.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132551607 132561674 - MGP_NODShiLtJ_P0073403 Prkab1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073404.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132551822 132561769 - MGP_NODShiLtJ_P0073404 Prkab1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073405.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132555065 132561715 - Prkab1 protein_coding retained_intron MGP_NODShiLtJ_T0073406.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132556956 132558968 - Prkab1 protein_coding retained_intron MGP_NODShiLtJ_T0073407.1 MGP_NODShiLtJ_G0029778.1 mouse_genomes_project 5 132561216 132561777 - Prkab1 protein_coding retained_intron MGP_NODShiLtJ_T0072590.1 MGP_NODShiLtJ_G0029610.1 mouse_genomes_project 5 118835313 118871660 - MGP_NODShiLtJ_P0072590 Sparcl1 protein_coding protein_coding MGP_NODShiLtJ_T0072591.1 MGP_NODShiLtJ_G0029610.1 mouse_genomes_project 5 118849026 118871366 - MGP_NODShiLtJ_P0072591 Sparcl1 protein_coding protein_coding MGP_NODShiLtJ_T0014991.1 MGP_NODShiLtJ_G0013099.1 mouse_genomes_project 5 122754259 122754814 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098043.1 MGP_NODShiLtJ_G0036455.1 mouse_genomes_project 5 39002427 39002530 - Gm25551 rRNA rRNA MGP_NODShiLtJ_T0014726.1 MGP_NODShiLtJ_G0012834.1 mouse_genomes_project 5 3541984 3542340 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001511.1 MGP_NODShiLtJ_G0001427.1 mouse_genomes_project 5 48370579 48372079 + TEC TEC MGP_NODShiLtJ_T0074974.1 MGP_NODShiLtJ_G0030059.1 mouse_genomes_project 5 157010907 157014483 + MGP_NODShiLtJ_P0074974 Cops6 protein_coding protein_coding MGP_NODShiLtJ_T0074975.1 MGP_NODShiLtJ_G0030059.1 mouse_genomes_project 5 157010936 157013815 + MGP_NODShiLtJ_P0074975 Cops6 protein_coding protein_coding MGP_NODShiLtJ_T0074976.1 MGP_NODShiLtJ_G0030059.1 mouse_genomes_project 5 157010945 157012221 + Cops6 protein_coding retained_intron MGP_NODShiLtJ_T0074977.1 MGP_NODShiLtJ_G0030059.1 mouse_genomes_project 5 157011005 157013976 + Cops6 protein_coding retained_intron MGP_NODShiLtJ_T0074978.1 MGP_NODShiLtJ_G0030059.1 mouse_genomes_project 5 157012613 157013756 + MGP_NODShiLtJ_P0074978 Cops6 protein_coding protein_coding MGP_NODShiLtJ_T0100634.1 MGP_NODShiLtJ_G0039028.1 mouse_genomes_project 5 115355043 115355177 + Gm26286 snoRNA snoRNA MGP_NODShiLtJ_T0073417.1 MGP_NODShiLtJ_G0029783.1 mouse_genomes_project 5 133783931 133808344 - MGP_NODShiLtJ_P0073417 Suds3 protein_coding protein_coding MGP_NODShiLtJ_T0073418.1 MGP_NODShiLtJ_G0029783.1 mouse_genomes_project 5 133783936 133796646 - Suds3 protein_coding retained_intron MGP_NODShiLtJ_T0073419.1 MGP_NODShiLtJ_G0029783.1 mouse_genomes_project 5 133784688 133808459 - MGP_NODShiLtJ_P0073419 Suds3 protein_coding protein_coding MGP_NODShiLtJ_T0073420.1 MGP_NODShiLtJ_G0029783.1 mouse_genomes_project 5 133787210 133791044 - Suds3 protein_coding retained_intron MGP_NODShiLtJ_T0073421.1 MGP_NODShiLtJ_G0029783.1 mouse_genomes_project 5 133797532 133805897 - Suds3 protein_coding retained_intron MGP_NODShiLtJ_T0073422.1 MGP_NODShiLtJ_G0029783.1 mouse_genomes_project 5 133797538 133802107 - Suds3 protein_coding retained_intron MGP_NODShiLtJ_T0101950.1 MGP_NODShiLtJ_G0040118.1 mouse_genomes_project 5 99287844 99315521 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001629.1 MGP_NODShiLtJ_G0001544.1 mouse_genomes_project 5 75477045 75478346 - TEC TEC MGP_NODShiLtJ_T0001862.1 MGP_NODShiLtJ_G0001774.1 mouse_genomes_project 5 168460427 168461112 + TEC TEC MGP_NODShiLtJ_T0072841.1 MGP_NODShiLtJ_G0029667.1 mouse_genomes_project 5 124224419 124303282 - MGP_NODShiLtJ_P0072841 Tmed11 protein_coding protein_coding MGP_NODShiLtJ_T0073708.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139434249 139440200 + MGP_NODShiLtJ_P0073708 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0073709.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139434255 139438577 + MGP_NODShiLtJ_P0073709 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0073710.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139434278 139438189 + MGP_NODShiLtJ_P0073710 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0073711.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139434281 139446758 + MGP_NODShiLtJ_P0073711 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0073712.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139434330 139438320 + MGP_NODShiLtJ_P0073712 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0073713.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139434459 139436052 + Myl2 protein_coding processed_transcript MGP_NODShiLtJ_T0073714.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139434683 139438172 + MGP_NODShiLtJ_P0073714 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0073715.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139434878 139437208 + MGP_NODShiLtJ_P0073715 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0073716.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139435095 139437990 + MGP_NODShiLtJ_P0073716 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0073717.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139436478 139440194 + Myl2 protein_coding processed_transcript MGP_NODShiLtJ_T0073718.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139436480 139440200 + Myl2 protein_coding processed_transcript MGP_NODShiLtJ_T0073719.1 MGP_NODShiLtJ_G0029841.1 mouse_genomes_project 5 139437192 139438287 + MGP_NODShiLtJ_P0073719 Myl2 protein_coding protein_coding MGP_NODShiLtJ_T0001812.1 MGP_NODShiLtJ_G0001725.1 mouse_genomes_project 5 149796127 149803945 - TEC TEC MGP_NODShiLtJ_T0073495.1 MGP_NODShiLtJ_G0029798.1 mouse_genomes_project 5 136576593 136579587 + Tbx3 protein_coding retained_intron MGP_NODShiLtJ_T0073496.1 MGP_NODShiLtJ_G0029798.1 mouse_genomes_project 5 136576593 136590467 + MGP_NODShiLtJ_P0073496 Tbx3 protein_coding protein_coding MGP_NODShiLtJ_T0073497.1 MGP_NODShiLtJ_G0029798.1 mouse_genomes_project 5 136576786 136590629 + MGP_NODShiLtJ_P0073497 Tbx3 protein_coding protein_coding MGP_NODShiLtJ_T0073498.1 MGP_NODShiLtJ_G0029798.1 mouse_genomes_project 5 136576942 136590629 + MGP_NODShiLtJ_P0073498 Tbx3 protein_coding protein_coding MGP_NODShiLtJ_T0073499.1 MGP_NODShiLtJ_G0029798.1 mouse_genomes_project 5 136581368 136586533 + Tbx3 protein_coding retained_intron MGP_NODShiLtJ_T0073500.1 MGP_NODShiLtJ_G0029798.1 mouse_genomes_project 5 136586151 136586735 + Tbx3 protein_coding processed_transcript MGP_NODShiLtJ_T0010611.1 MGP_NODShiLtJ_G0008744.1 mouse_genomes_project 5 142013401 142013480 - Gm27486 miRNA miRNA MGP_NODShiLtJ_T0008356.1 MGP_NODShiLtJ_G0006769.1 mouse_genomes_project 5 162716957 162732627 + lincRNA lincRNA MGP_NODShiLtJ_T0072847.1 MGP_NODShiLtJ_G0029673.1 mouse_genomes_project 5 125074573 125106951 + MGP_NODShiLtJ_P0072847 Vmn2r17 protein_coding protein_coding MGP_NODShiLtJ_T0008046.1 MGP_NODShiLtJ_G0006549.1 mouse_genomes_project 5 42133222 42146823 - Gm35191 lincRNA lincRNA MGP_NODShiLtJ_T0074300.1 MGP_NODShiLtJ_G0029937.1 mouse_genomes_project 5 147914599 147917341 + MGP_NODShiLtJ_P0074300 Nupr1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074301.1 MGP_NODShiLtJ_G0029937.1 mouse_genomes_project 5 147914601 147919840 + MGP_NODShiLtJ_P0074301 Nupr1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074302.1 MGP_NODShiLtJ_G0029937.1 mouse_genomes_project 5 147914627 147916454 + MGP_NODShiLtJ_P0074302 Nupr1l protein_coding protein_coding MGP_NODShiLtJ_T0074303.1 MGP_NODShiLtJ_G0029937.1 mouse_genomes_project 5 147917029 147917341 + Nupr1l protein_coding processed_transcript MGP_NODShiLtJ_T0069641.1 MGP_NODShiLtJ_G0029063.1 mouse_genomes_project 5 410892 419359 - MGP_NODShiLtJ_P0069641 Gatad1 protein_coding protein_coding MGP_NODShiLtJ_T0069645.1 MGP_NODShiLtJ_G0029063.1 mouse_genomes_project 5 419209 425434 - MGP_NODShiLtJ_P0069645 Gatad1 protein_coding protein_coding MGP_NODShiLtJ_T0069646.1 MGP_NODShiLtJ_G0029063.1 mouse_genomes_project 5 420895 425621 - MGP_NODShiLtJ_P0069646 Gatad1 protein_coding protein_coding MGP_NODShiLtJ_T0072904.1 MGP_NODShiLtJ_G0029686.1 mouse_genomes_project 5 126231947 126287551 + MGP_NODShiLtJ_P0072904 Pole protein_coding protein_coding MGP_NODShiLtJ_T0072905.1 MGP_NODShiLtJ_G0029686.1 mouse_genomes_project 5 126231982 126236966 + MGP_NODShiLtJ_P0072905 Pole protein_coding protein_coding MGP_NODShiLtJ_T0072906.1 MGP_NODShiLtJ_G0029686.1 mouse_genomes_project 5 126232018 126256281 + Pole protein_coding retained_intron MGP_NODShiLtJ_T0072907.1 MGP_NODShiLtJ_G0029686.1 mouse_genomes_project 5 126232029 126287535 + MGP_NODShiLtJ_P0072907 Pole protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072908.1 MGP_NODShiLtJ_G0029686.1 mouse_genomes_project 5 126266890 126269019 + Pole protein_coding retained_intron MGP_NODShiLtJ_T0072909.1 MGP_NODShiLtJ_G0029686.1 mouse_genomes_project 5 126277339 126287528 + Pole protein_coding retained_intron MGP_NODShiLtJ_T0072910.1 MGP_NODShiLtJ_G0029686.1 mouse_genomes_project 5 126280451 126287530 + MGP_NODShiLtJ_P0072910 Pole protein_coding protein_coding MGP_NODShiLtJ_T0072911.1 MGP_NODShiLtJ_G0029686.1 mouse_genomes_project 5 126283531 126287513 + Pole protein_coding retained_intron MGP_NODShiLtJ_T0069816.1 MGP_NODShiLtJ_G0029092.1 mouse_genomes_project 5 6444584 6501989 + MGP_NODShiLtJ_P0069816 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069817.1 MGP_NODShiLtJ_G0029092.1 mouse_genomes_project 5 6444590 6459440 + MGP_NODShiLtJ_P0069817 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069818.1 MGP_NODShiLtJ_G0029092.1 mouse_genomes_project 5 6444623 6519487 + MGP_NODShiLtJ_P0069818 protein_coding protein_coding MGP_NODShiLtJ_T0069819.1 MGP_NODShiLtJ_G0029092.1 mouse_genomes_project 5 6445179 6519130 + MGP_NODShiLtJ_P0069819 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069820.1 MGP_NODShiLtJ_G0029092.1 mouse_genomes_project 5 6474901 6477445 + protein_coding retained_intron MGP_NODShiLtJ_T0069821.1 MGP_NODShiLtJ_G0029092.1 mouse_genomes_project 5 6504548 6506943 + protein_coding retained_intron MGP_NODShiLtJ_T0069822.1 MGP_NODShiLtJ_G0029092.1 mouse_genomes_project 5 6504753 6519115 + MGP_NODShiLtJ_P0069822 protein_coding protein_coding MGP_NODShiLtJ_T0069823.1 MGP_NODShiLtJ_G0029092.1 mouse_genomes_project 5 6505021 6508045 + protein_coding retained_intron MGP_NODShiLtJ_T0073173.1 MGP_NODShiLtJ_G0029737.1 mouse_genomes_project 5 130692671 130709594 - MGP_NODShiLtJ_P0073173 Kctd10 protein_coding protein_coding MGP_NODShiLtJ_T0073174.1 MGP_NODShiLtJ_G0029737.1 mouse_genomes_project 5 130693566 130709575 - MGP_NODShiLtJ_P0073174 Kctd10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073175.1 MGP_NODShiLtJ_G0029737.1 mouse_genomes_project 5 130694726 130709569 - MGP_NODShiLtJ_P0073175 Kctd10 protein_coding protein_coding MGP_NODShiLtJ_T0073176.1 MGP_NODShiLtJ_G0029737.1 mouse_genomes_project 5 130694810 130701247 - Kctd10 protein_coding processed_transcript MGP_NODShiLtJ_T0073177.1 MGP_NODShiLtJ_G0029737.1 mouse_genomes_project 5 130695987 130697774 - Kctd10 protein_coding retained_intron MGP_NODShiLtJ_T0073178.1 MGP_NODShiLtJ_G0029737.1 mouse_genomes_project 5 130696007 130699312 - Kctd10 protein_coding retained_intron MGP_NODShiLtJ_T0073179.1 MGP_NODShiLtJ_G0029737.1 mouse_genomes_project 5 130696088 130698357 - Kctd10 protein_coding retained_intron MGP_NODShiLtJ_T0072077.1 MGP_NODShiLtJ_G0029488.1 mouse_genomes_project 5 99888956 99924375 - MGP_NODShiLtJ_P0072077 Gm43638 protein_coding protein_coding MGP_NODShiLtJ_T0069988.1 MGP_NODShiLtJ_G0029124.1 mouse_genomes_project 5 22247069 22275126 - MGP_NODShiLtJ_P0069988 Dnajc2 protein_coding protein_coding MGP_NODShiLtJ_T0069989.1 MGP_NODShiLtJ_G0029124.1 mouse_genomes_project 5 22247071 22275155 - MGP_NODShiLtJ_P0069989 Dnajc2 protein_coding protein_coding MGP_NODShiLtJ_T0069990.1 MGP_NODShiLtJ_G0029124.1 mouse_genomes_project 5 22247078 22275112 - Dnajc2 protein_coding retained_intron MGP_NODShiLtJ_T0069991.1 MGP_NODShiLtJ_G0029124.1 mouse_genomes_project 5 22257253 22259234 - Dnajc2 protein_coding retained_intron MGP_NODShiLtJ_T0069992.1 MGP_NODShiLtJ_G0029124.1 mouse_genomes_project 5 22263145 22275096 - Dnajc2 protein_coding retained_intron MGP_NODShiLtJ_T0069993.1 MGP_NODShiLtJ_G0029124.1 mouse_genomes_project 5 22264130 22275127 - MGP_NODShiLtJ_P0069993 Dnajc2 protein_coding protein_coding MGP_NODShiLtJ_T0071964.1 MGP_NODShiLtJ_G0029458.1 mouse_genomes_project 5 86310585 86318063 - MGP_NODShiLtJ_P0071964 Spink2 protein_coding protein_coding MGP_NODShiLtJ_T0071965.1 MGP_NODShiLtJ_G0029458.1 mouse_genomes_project 5 86310585 86318030 - MGP_NODShiLtJ_P0071965 Spink2 protein_coding protein_coding MGP_NODShiLtJ_T0071966.1 MGP_NODShiLtJ_G0029458.1 mouse_genomes_project 5 86310590 86317797 - MGP_NODShiLtJ_P0071966 Spink2 protein_coding protein_coding MGP_NODShiLtJ_T0073574.1 MGP_NODShiLtJ_G0029819.1 mouse_genomes_project 5 137953021 138011456 - MGP_NODShiLtJ_P0073574 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073575.1 MGP_NODShiLtJ_G0029819.1 mouse_genomes_project 5 137953243 138005619 - protein_coding retained_intron MGP_NODShiLtJ_T0073577.1 MGP_NODShiLtJ_G0029819.1 mouse_genomes_project 5 138002741 138011425 - MGP_NODShiLtJ_P0073577 protein_coding protein_coding MGP_NODShiLtJ_T0072467.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114925680 114996923 - MGP_NODShiLtJ_P0072467 Lin54 protein_coding protein_coding MGP_NODShiLtJ_T0072468.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114925690 114993601 - MGP_NODShiLtJ_P0072468 Lin54 protein_coding protein_coding MGP_NODShiLtJ_T0072469.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114925795 114993643 - MGP_NODShiLtJ_P0072469 Lin54 protein_coding protein_coding MGP_NODShiLtJ_T0072470.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114925795 114996959 - MGP_NODShiLtJ_P0072470 Lin54 protein_coding protein_coding MGP_NODShiLtJ_T0072471.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114925804 114993588 - MGP_NODShiLtJ_P0072471 Lin54 protein_coding protein_coding MGP_NODShiLtJ_T0072472.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114925962 114996972 - MGP_NODShiLtJ_P0072472 Lin54 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072473.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114927314 114993533 - MGP_NODShiLtJ_P0072473 Lin54 protein_coding protein_coding MGP_NODShiLtJ_T0072474.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114927314 114993533 - MGP_NODShiLtJ_P0072474 Lin54 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072475.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114944382 114979867 - MGP_NODShiLtJ_P0072475 Lin54 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072476.1 MGP_NODShiLtJ_G0029587.1 mouse_genomes_project 5 114978784 114993588 - Lin54 protein_coding retained_intron MGP_NODShiLtJ_T0070922.1 MGP_NODShiLtJ_G0029278.1 mouse_genomes_project 5 36855041 36861966 + MGP_NODShiLtJ_P0070922 Hgfac protein_coding protein_coding MGP_NODShiLtJ_T0070923.1 MGP_NODShiLtJ_G0029278.1 mouse_genomes_project 5 36855109 36862003 + Hgfac protein_coding retained_intron MGP_NODShiLtJ_T0070924.1 MGP_NODShiLtJ_G0029278.1 mouse_genomes_project 5 36855109 36857224 + MGP_NODShiLtJ_P0070924 Hgfac protein_coding protein_coding MGP_NODShiLtJ_T0070925.1 MGP_NODShiLtJ_G0029278.1 mouse_genomes_project 5 36857148 36858988 + Hgfac protein_coding retained_intron MGP_NODShiLtJ_T0070926.1 MGP_NODShiLtJ_G0029278.1 mouse_genomes_project 5 36857890 36860505 + MGP_NODShiLtJ_P0070926 Hgfac protein_coding protein_coding MGP_NODShiLtJ_T0070927.1 MGP_NODShiLtJ_G0029278.1 mouse_genomes_project 5 36858367 36859453 + Hgfac protein_coding retained_intron MGP_NODShiLtJ_T0070928.1 MGP_NODShiLtJ_G0029278.1 mouse_genomes_project 5 36860106 36861948 + Hgfac protein_coding retained_intron MGP_NODShiLtJ_T0074619.1 MGP_NODShiLtJ_G0029991.1 mouse_genomes_project 5 154228821 154270307 - MGP_NODShiLtJ_P0074619 Styxl1 protein_coding protein_coding MGP_NODShiLtJ_T0074620.1 MGP_NODShiLtJ_G0029991.1 mouse_genomes_project 5 154228851 154262367 - MGP_NODShiLtJ_P0074620 Styxl1 protein_coding protein_coding MGP_NODShiLtJ_T0074621.1 MGP_NODShiLtJ_G0029991.1 mouse_genomes_project 5 154246528 154270385 - MGP_NODShiLtJ_P0074621 Styxl1 protein_coding protein_coding MGP_NODShiLtJ_T0004804.1 MGP_NODShiLtJ_G0004131.1 mouse_genomes_project 5 154657494 154658199 - Gm43604 antisense antisense MGP_NODShiLtJ_T0069652.1 MGP_NODShiLtJ_G0029065.1 mouse_genomes_project 5 483299 623943 - MGP_NODShiLtJ_P0069652 Ankib1 protein_coding protein_coding MGP_NODShiLtJ_T0069653.1 MGP_NODShiLtJ_G0029065.1 mouse_genomes_project 5 486762 496212 - Ankib1 protein_coding retained_intron MGP_NODShiLtJ_T0069654.1 MGP_NODShiLtJ_G0029065.1 mouse_genomes_project 5 487174 616473 - MGP_NODShiLtJ_P0069654 Ankib1 protein_coding protein_coding MGP_NODShiLtJ_T0069655.1 MGP_NODShiLtJ_G0029065.1 mouse_genomes_project 5 488095 488524 - Ankib1 protein_coding retained_intron MGP_NODShiLtJ_T0069656.1 MGP_NODShiLtJ_G0029065.1 mouse_genomes_project 5 493821 495949 - Ankib1 protein_coding retained_intron MGP_NODShiLtJ_T0069657.1 MGP_NODShiLtJ_G0029065.1 mouse_genomes_project 5 534518 623805 - Ankib1 protein_coding retained_intron MGP_NODShiLtJ_T0075696.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170050084 170072790 - MGP_NODShiLtJ_P0075696 Hsph1 protein_coding protein_coding MGP_NODShiLtJ_T0075697.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170052341 170072957 - MGP_NODShiLtJ_P0075697 Hsph1 protein_coding protein_coding MGP_NODShiLtJ_T0075698.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170052642 170072828 - MGP_NODShiLtJ_P0075698 Hsph1 protein_coding protein_coding MGP_NODShiLtJ_T0075699.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170052966 170072957 - MGP_NODShiLtJ_P0075699 Hsph1 protein_coding protein_coding MGP_NODShiLtJ_T0075700.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170053252 170054971 - Hsph1 protein_coding retained_intron MGP_NODShiLtJ_T0075701.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170055690 170056985 - Hsph1 protein_coding retained_intron MGP_NODShiLtJ_T0075702.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170056479 170072957 - Hsph1 protein_coding retained_intron MGP_NODShiLtJ_T0075703.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170066602 170072995 - MGP_NODShiLtJ_P0075703 Hsph1 protein_coding protein_coding MGP_NODShiLtJ_T0075704.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170067058 170072909 - MGP_NODShiLtJ_P0075704 Hsph1 protein_coding protein_coding MGP_NODShiLtJ_T0075705.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170068657 170072970 - MGP_NODShiLtJ_P0075705 Hsph1 protein_coding protein_coding MGP_NODShiLtJ_T0075706.1 MGP_NODShiLtJ_G0030213.1 mouse_genomes_project 5 170068716 170070506 - Hsph1 protein_coding processed_transcript MGP_NODShiLtJ_T0070805.1 MGP_NODShiLtJ_G0029264.1 mouse_genomes_project 5 35915652 35917106 - Mxd4 protein_coding processed_transcript MGP_NODShiLtJ_T0070806.1 MGP_NODShiLtJ_G0029264.1 mouse_genomes_project 5 35915656 35930892 - MGP_NODShiLtJ_P0070806 Mxd4 protein_coding protein_coding MGP_NODShiLtJ_T0070807.1 MGP_NODShiLtJ_G0029264.1 mouse_genomes_project 5 35919760 35930902 - MGP_NODShiLtJ_P0070807 Mxd4 protein_coding protein_coding MGP_NODShiLtJ_T0070808.1 MGP_NODShiLtJ_G0029264.1 mouse_genomes_project 5 35922925 35927552 - Mxd4 protein_coding retained_intron MGP_NODShiLtJ_T0014957.1 MGP_NODShiLtJ_G0013065.1 mouse_genomes_project 5 104916617 104917112 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070371.1 MGP_NODShiLtJ_G0029199.1 mouse_genomes_project 5 32068358 32079527 + MGP_NODShiLtJ_P0070371 Tmem214 protein_coding protein_coding MGP_NODShiLtJ_T0070372.1 MGP_NODShiLtJ_G0029199.1 mouse_genomes_project 5 32069977 32077391 + MGP_NODShiLtJ_P0070372 Tmem214 protein_coding protein_coding MGP_NODShiLtJ_T0070373.1 MGP_NODShiLtJ_G0029199.1 mouse_genomes_project 5 32069979 32078711 + Tmem214 protein_coding retained_intron MGP_NODShiLtJ_T0070374.1 MGP_NODShiLtJ_G0029199.1 mouse_genomes_project 5 32069981 32077815 + Tmem214 protein_coding retained_intron MGP_NODShiLtJ_T0070375.1 MGP_NODShiLtJ_G0029199.1 mouse_genomes_project 5 32070710 32071832 + Tmem214 protein_coding retained_intron MGP_NODShiLtJ_T0070376.1 MGP_NODShiLtJ_G0029199.1 mouse_genomes_project 5 32072119 32073941 + Tmem214 protein_coding processed_transcript MGP_NODShiLtJ_T0070377.1 MGP_NODShiLtJ_G0029199.1 mouse_genomes_project 5 32072164 32077810 + Tmem214 protein_coding retained_intron MGP_NODShiLtJ_T0015042.1 MGP_NODShiLtJ_G0013150.1 mouse_genomes_project 5 152794721 152794931 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069691.1 MGP_NODShiLtJ_G0029071.1 mouse_genomes_project 5 1120379 1125659 + MGP_NODShiLtJ_P0069691 protein_coding protein_coding MGP_NODShiLtJ_T0001863.1 MGP_NODShiLtJ_G0001775.1 mouse_genomes_project 5 168853724 168854369 - TEC TEC MGP_NODShiLtJ_T0071490.1 MGP_NODShiLtJ_G0029380.1 mouse_genomes_project 5 72789653 72794110 + Lias protein_coding retained_intron MGP_NODShiLtJ_T0071491.1 MGP_NODShiLtJ_G0029380.1 mouse_genomes_project 5 72789657 72806715 + MGP_NODShiLtJ_P0071491 Lias protein_coding protein_coding MGP_NODShiLtJ_T0071492.1 MGP_NODShiLtJ_G0029380.1 mouse_genomes_project 5 72789673 72793539 + Lias protein_coding retained_intron MGP_NODShiLtJ_T0071493.1 MGP_NODShiLtJ_G0029380.1 mouse_genomes_project 5 72789674 72795613 + MGP_NODShiLtJ_P0071493 Lias protein_coding protein_coding MGP_NODShiLtJ_T0071494.1 MGP_NODShiLtJ_G0029380.1 mouse_genomes_project 5 72795468 72797845 + Lias protein_coding retained_intron MGP_NODShiLtJ_T0072625.1 MGP_NODShiLtJ_G0029625.1 mouse_genomes_project 5 120356169 120447319 - MGP_NODShiLtJ_P0072625 protein_coding protein_coding MGP_NODShiLtJ_T0074559.1 MGP_NODShiLtJ_G0029978.1 mouse_genomes_project 5 153582622 153596164 + MGP_NODShiLtJ_P0074559 Bcl7b protein_coding protein_coding MGP_NODShiLtJ_T0074560.1 MGP_NODShiLtJ_G0029978.1 mouse_genomes_project 5 153582728 153587788 + MGP_NODShiLtJ_P0074560 Bcl7b protein_coding protein_coding MGP_NODShiLtJ_T0074561.1 MGP_NODShiLtJ_G0029978.1 mouse_genomes_project 5 153582751 153596140 + MGP_NODShiLtJ_P0074561 Bcl7b protein_coding protein_coding MGP_NODShiLtJ_T0074562.1 MGP_NODShiLtJ_G0029978.1 mouse_genomes_project 5 153582784 153594904 + MGP_NODShiLtJ_P0074562 Bcl7b protein_coding protein_coding MGP_NODShiLtJ_T0074563.1 MGP_NODShiLtJ_G0029978.1 mouse_genomes_project 5 153593890 153595434 + Bcl7b protein_coding retained_intron MGP_NODShiLtJ_T0075514.1 MGP_NODShiLtJ_G0030170.1 mouse_genomes_project 5 165161038 165239719 - MGP_NODShiLtJ_P0075514 protein_coding protein_coding MGP_NODShiLtJ_T0001545.1 MGP_NODShiLtJ_G0001461.1 mouse_genomes_project 5 52920405 52925814 - TEC TEC MGP_NODShiLtJ_T0074810.1 MGP_NODShiLtJ_G0030025.1 mouse_genomes_project 5 155989908 155994649 - MGP_NODShiLtJ_P0074810 Trip6 protein_coding protein_coding MGP_NODShiLtJ_T0074811.1 MGP_NODShiLtJ_G0030025.1 mouse_genomes_project 5 155993197 155994436 - MGP_NODShiLtJ_P0074811 Trip6 protein_coding protein_coding MGP_NODShiLtJ_T0074812.1 MGP_NODShiLtJ_G0030025.1 mouse_genomes_project 5 155993224 155994407 - Trip6 protein_coding retained_intron MGP_NODShiLtJ_T0074813.1 MGP_NODShiLtJ_G0030025.1 mouse_genomes_project 5 155993603 155994453 - Trip6 protein_coding processed_transcript MGP_NODShiLtJ_T0098406.1 MGP_NODShiLtJ_G0036811.1 mouse_genomes_project 5 120733350 120734714 + C230066G23Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0074595.1 MGP_NODShiLtJ_G0029986.1 mouse_genomes_project 5 154007816 154011756 - MGP_NODShiLtJ_P0074595 Ccl26 protein_coding protein_coding MGP_NODShiLtJ_T0070083.1 MGP_NODShiLtJ_G0029141.1 mouse_genomes_project 5 25111096 25119797 - MGP_NODShiLtJ_P0070083 Atg9b protein_coding protein_coding MGP_NODShiLtJ_T0070084.1 MGP_NODShiLtJ_G0029141.1 mouse_genomes_project 5 25111535 25118289 - Atg9b protein_coding processed_transcript MGP_NODShiLtJ_T0070085.1 MGP_NODShiLtJ_G0029141.1 mouse_genomes_project 5 25114020 25114882 - Atg9b protein_coding processed_transcript MGP_NODShiLtJ_T0075716.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170603456 170852052 + MGP_NODShiLtJ_P0075716 Fry protein_coding protein_coding MGP_NODShiLtJ_T0075717.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170603478 170860433 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075718.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170603478 170857299 + MGP_NODShiLtJ_P0075718 Fry protein_coding protein_coding MGP_NODShiLtJ_T0075719.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170687268 170852027 + MGP_NODShiLtJ_P0075719 Fry protein_coding protein_coding MGP_NODShiLtJ_T0075720.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170763105 170765470 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075721.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170765331 171026909 + MGP_NODShiLtJ_P0075721 Fry protein_coding protein_coding MGP_NODShiLtJ_T0075722.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170802841 170904353 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075723.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170914285 170916956 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075724.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170925091 170928500 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075725.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170945493 170948669 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075726.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170955373 171026909 + MGP_NODShiLtJ_P0075726 Fry protein_coding protein_coding MGP_NODShiLtJ_T0075727.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170968036 171026909 + MGP_NODShiLtJ_P0075727 Fry protein_coding protein_coding MGP_NODShiLtJ_T0075728.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170974618 171025954 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075729.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 170977553 170981233 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075730.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 171016360 171018978 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075731.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 171019289 171021166 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0075732.1 MGP_NODShiLtJ_G0030216.1 mouse_genomes_project 5 171025027 171026791 + Fry protein_coding retained_intron MGP_NODShiLtJ_T0069970.1 MGP_NODShiLtJ_G0029120.1 mouse_genomes_project 5 22013764 22022555 + Lrrc17 protein_coding processed_transcript MGP_NODShiLtJ_T0069971.1 MGP_NODShiLtJ_G0029120.1 mouse_genomes_project 5 22013768 22046065 + MGP_NODShiLtJ_P0069971 Lrrc17 protein_coding protein_coding MGP_NODShiLtJ_T0072328.1 MGP_NODShiLtJ_G0029557.1 mouse_genomes_project 5 105890680 106210472 + MGP_NODShiLtJ_P0072328 Shroom3 protein_coding protein_coding MGP_NODShiLtJ_T0072329.1 MGP_NODShiLtJ_G0029557.1 mouse_genomes_project 5 105890722 106210434 + MGP_NODShiLtJ_P0072329 Shroom3 protein_coding protein_coding MGP_NODShiLtJ_T0072330.1 MGP_NODShiLtJ_G0029557.1 mouse_genomes_project 5 106026688 106033506 + Shroom3 protein_coding processed_transcript MGP_NODShiLtJ_T0072331.1 MGP_NODShiLtJ_G0029557.1 mouse_genomes_project 5 106033487 106059501 + Shroom3 protein_coding processed_transcript MGP_NODShiLtJ_T0072332.1 MGP_NODShiLtJ_G0029557.1 mouse_genomes_project 5 106160116 106175070 + MGP_NODShiLtJ_P0072332 Shroom3 protein_coding protein_coding MGP_NODShiLtJ_T0072333.1 MGP_NODShiLtJ_G0029557.1 mouse_genomes_project 5 106173207 106176862 + Shroom3 protein_coding retained_intron MGP_NODShiLtJ_T0072334.1 MGP_NODShiLtJ_G0029557.1 mouse_genomes_project 5 106193572 106194483 + Shroom3 protein_coding retained_intron MGP_NODShiLtJ_T0072335.1 MGP_NODShiLtJ_G0029557.1 mouse_genomes_project 5 106207789 106210500 + Shroom3 protein_coding retained_intron MGP_NODShiLtJ_T0073137.1 MGP_NODShiLtJ_G0029731.1 mouse_genomes_project 5 130366586 130393660 + Usp30 protein_coding processed_transcript MGP_NODShiLtJ_T0073138.1 MGP_NODShiLtJ_G0029731.1 mouse_genomes_project 5 130366639 130411435 + MGP_NODShiLtJ_P0073138 Usp30 protein_coding protein_coding MGP_NODShiLtJ_T0073139.1 MGP_NODShiLtJ_G0029731.1 mouse_genomes_project 5 130366875 130389826 + Usp30 protein_coding processed_transcript MGP_NODShiLtJ_T0073140.1 MGP_NODShiLtJ_G0029731.1 mouse_genomes_project 5 130405898 130431193 + MGP_NODShiLtJ_P0073140 Usp30 protein_coding protein_coding MGP_NODShiLtJ_T0073141.1 MGP_NODShiLtJ_G0029731.1 mouse_genomes_project 5 130405943 130427569 + MGP_NODShiLtJ_P0073141 Usp30 protein_coding protein_coding MGP_NODShiLtJ_T0073142.1 MGP_NODShiLtJ_G0029731.1 mouse_genomes_project 5 130406016 130429983 + MGP_NODShiLtJ_P0073142 Usp30 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073143.1 MGP_NODShiLtJ_G0029731.1 mouse_genomes_project 5 130409295 130417902 + Usp30 protein_coding retained_intron MGP_NODShiLtJ_T0073144.1 MGP_NODShiLtJ_G0029731.1 mouse_genomes_project 5 130416711 130417231 + Usp30 protein_coding retained_intron MGP_NODShiLtJ_T0001642.1 MGP_NODShiLtJ_G0001557.1 mouse_genomes_project 5 81539925 81542032 - TEC TEC MGP_NODShiLtJ_T0072147.1 MGP_NODShiLtJ_G0029514.1 mouse_genomes_project 5 101560376 101596954 + MGP_NODShiLtJ_P0072147 Dck protein_coding protein_coding MGP_NODShiLtJ_T0072148.1 MGP_NODShiLtJ_G0029514.1 mouse_genomes_project 5 101564738 101565557 + Dck protein_coding retained_intron MGP_NODShiLtJ_T0014917.1 MGP_NODShiLtJ_G0013025.1 mouse_genomes_project 5 85072252 85073761 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075341.1 MGP_NODShiLtJ_G0030134.1 mouse_genomes_project 5 162916952 162936934 + MGP_NODShiLtJ_P0075341 Kdelr2 protein_coding protein_coding MGP_NODShiLtJ_T0074853.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156290074 156309383 + MGP_NODShiLtJ_P0074853 Tfr2 protein_coding protein_coding MGP_NODShiLtJ_T0074854.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156290085 156309385 + MGP_NODShiLtJ_P0074854 Tfr2 protein_coding protein_coding MGP_NODShiLtJ_T0074855.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156290098 156291597 + Tfr2 protein_coding retained_intron MGP_NODShiLtJ_T0074856.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156290103 156309383 + MGP_NODShiLtJ_P0074856 Tfr2 protein_coding protein_coding MGP_NODShiLtJ_T0074857.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156290954 156309369 + MGP_NODShiLtJ_P0074857 Tfr2 protein_coding protein_coding MGP_NODShiLtJ_T0074858.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156291039 156309380 + MGP_NODShiLtJ_P0074858 Tfr2 protein_coding protein_coding MGP_NODShiLtJ_T0074859.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156291685 156296351 + Tfr2 protein_coding retained_intron MGP_NODShiLtJ_T0074860.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156296443 156299671 + Tfr2 protein_coding retained_intron MGP_NODShiLtJ_T0074861.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156300771 156302711 + MGP_NODShiLtJ_P0074861 Tfr2 protein_coding protein_coding MGP_NODShiLtJ_T0074862.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156305135 156308893 + Tfr2 protein_coding retained_intron MGP_NODShiLtJ_T0074863.1 MGP_NODShiLtJ_G0030034.1 mouse_genomes_project 5 156305135 156305960 + Tfr2 protein_coding retained_intron MGP_NODShiLtJ_T0073961.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141236512 141251808 - MGP_NODShiLtJ_P0073961 Rsrc2 protein_coding protein_coding MGP_NODShiLtJ_T0073962.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141236520 141259589 - MGP_NODShiLtJ_P0073962 Rsrc2 protein_coding protein_coding MGP_NODShiLtJ_T0073963.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141236524 141259612 - MGP_NODShiLtJ_P0073963 Rsrc2 protein_coding protein_coding MGP_NODShiLtJ_T0073964.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141236818 141251855 - Rsrc2 protein_coding processed_transcript MGP_NODShiLtJ_T0073965.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141237101 141259614 - MGP_NODShiLtJ_P0073965 Rsrc2 protein_coding protein_coding MGP_NODShiLtJ_T0073966.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141237112 141259580 - MGP_NODShiLtJ_P0073966 Rsrc2 protein_coding protein_coding MGP_NODShiLtJ_T0073967.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141237178 141251880 - MGP_NODShiLtJ_P0073967 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073968.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141237178 141252667 - MGP_NODShiLtJ_P0073968 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073969.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141237178 141252667 - MGP_NODShiLtJ_P0073969 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073970.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141237341 141241787 - Rsrc2 protein_coding retained_intron MGP_NODShiLtJ_T0073971.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141238623 141259586 - MGP_NODShiLtJ_P0073971 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073972.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141241461 141259612 - MGP_NODShiLtJ_P0073972 Rsrc2 protein_coding protein_coding MGP_NODShiLtJ_T0073973.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141241695 141259582 - MGP_NODShiLtJ_P0073973 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073974.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141241695 141259581 - MGP_NODShiLtJ_P0073974 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073975.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141242926 141254591 - Rsrc2 protein_coding retained_intron MGP_NODShiLtJ_T0073976.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141242981 141250808 - Rsrc2 protein_coding retained_intron MGP_NODShiLtJ_T0073977.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141244704 141259571 - MGP_NODShiLtJ_P0073977 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073978.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141244751 141259612 - MGP_NODShiLtJ_P0073978 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073979.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141247758 141259569 - MGP_NODShiLtJ_P0073979 Rsrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073980.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141249892 141259567 - Rsrc2 protein_coding processed_transcript MGP_NODShiLtJ_T0073981.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141251009 141259581 - Rsrc2 protein_coding retained_intron MGP_NODShiLtJ_T0073982.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141251011 141259581 - Rsrc2 protein_coding retained_intron MGP_NODShiLtJ_T0073983.1 MGP_NODShiLtJ_G0029878.1 mouse_genomes_project 5 141252590 141254252 - Rsrc2 protein_coding retained_intron MGP_NODShiLtJ_T0100629.1 MGP_NODShiLtJ_G0039023.1 mouse_genomes_project 5 106326183 106326319 + Gm22915 snoRNA snoRNA MGP_NODShiLtJ_T0001576.1 MGP_NODShiLtJ_G0001492.1 mouse_genomes_project 5 63278264 63291218 + TEC TEC MGP_NODShiLtJ_T0070815.1 MGP_NODShiLtJ_G0029266.1 mouse_genomes_project 5 36048074 36080931 + MGP_NODShiLtJ_P0070815 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0070816.1 MGP_NODShiLtJ_G0029266.1 mouse_genomes_project 5 36050623 36080931 + MGP_NODShiLtJ_P0070816 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0075264.1 MGP_NODShiLtJ_G0030119.1 mouse_genomes_project 5 162130879 162151355 + MGP_NODShiLtJ_P0075264 Slc29a4 protein_coding protein_coding MGP_NODShiLtJ_T0075265.1 MGP_NODShiLtJ_G0030119.1 mouse_genomes_project 5 162140561 162164461 + MGP_NODShiLtJ_P0075265 Slc29a4 protein_coding protein_coding MGP_NODShiLtJ_T0007979.1 MGP_NODShiLtJ_G0006509.1 mouse_genomes_project 5 15316813 15326369 - Gm3510 lincRNA lincRNA MGP_NODShiLtJ_T0014769.1 MGP_NODShiLtJ_G0012877.1 mouse_genomes_project 5 22459119 22459761 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074195.1 MGP_NODShiLtJ_G0029916.1 mouse_genomes_project 5 145015875 145362206 + MGP_NODShiLtJ_P0074195 Tmem132c protein_coding protein_coding MGP_NODShiLtJ_T0074196.1 MGP_NODShiLtJ_G0029916.1 mouse_genomes_project 5 145015893 145056008 + Tmem132c protein_coding processed_transcript MGP_NODShiLtJ_T0074197.1 MGP_NODShiLtJ_G0029916.1 mouse_genomes_project 5 145347918 145361280 + Tmem132c protein_coding processed_transcript MGP_NODShiLtJ_T0074198.1 MGP_NODShiLtJ_G0029916.1 mouse_genomes_project 5 145349669 145360900 + MGP_NODShiLtJ_P0074198 Tmem132c protein_coding protein_coding MGP_NODShiLtJ_T0069718.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2726791 2753889 - MGP_NODShiLtJ_P0069718 Gtpbp10 protein_coding protein_coding MGP_NODShiLtJ_T0069719.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2732700 2753947 - MGP_NODShiLtJ_P0069719 Gtpbp10 protein_coding protein_coding MGP_NODShiLtJ_T0069720.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2732918 2753937 - MGP_NODShiLtJ_P0069720 Gtpbp10 protein_coding protein_coding MGP_NODShiLtJ_T0069721.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2735365 2737577 - Gtpbp10 protein_coding retained_intron MGP_NODShiLtJ_T0069722.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2735384 2736842 - Gtpbp10 protein_coding retained_intron MGP_NODShiLtJ_T0069723.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2735800 2751671 - MGP_NODShiLtJ_P0069723 Gtpbp10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069724.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2737451 2753885 - MGP_NODShiLtJ_P0069724 Gtpbp10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069725.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2737495 2750177 - Gtpbp10 protein_coding retained_intron MGP_NODShiLtJ_T0069726.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2737532 2740394 - Gtpbp10 protein_coding retained_intron MGP_NODShiLtJ_T0069727.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2739501 2753906 - MGP_NODShiLtJ_P0069727 Gtpbp10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069728.1 MGP_NODShiLtJ_G0029076.1 mouse_genomes_project 5 2753299 2753940 - MGP_NODShiLtJ_P0069728 Gtpbp10 protein_coding protein_coding MGP_NODShiLtJ_T0014826.1 MGP_NODShiLtJ_G0012934.1 mouse_genomes_project 5 35417366 35417537 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001536.1 MGP_NODShiLtJ_G0001452.1 mouse_genomes_project 5 52468980 52470312 - TEC TEC MGP_NODShiLtJ_T0004788.1 MGP_NODShiLtJ_G0004118.1 mouse_genomes_project 5 148257998 148260613 - Gm42469 antisense antisense MGP_NODShiLtJ_T0101966.1 MGP_NODShiLtJ_G0040134.1 mouse_genomes_project 5 159705438 159730965 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0014862.1 MGP_NODShiLtJ_G0012970.1 mouse_genomes_project 5 59978096 59978802 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069964.1 MGP_NODShiLtJ_G0029118.1 mouse_genomes_project 5 21887562 21948964 + MGP_NODShiLtJ_P0069964 Fam185a protein_coding protein_coding MGP_NODShiLtJ_T0069965.1 MGP_NODShiLtJ_G0029118.1 mouse_genomes_project 5 21887605 21898277 + Fam185a protein_coding retained_intron MGP_NODShiLtJ_T0069966.1 MGP_NODShiLtJ_G0029118.1 mouse_genomes_project 5 21898411 21947644 + Fam185a protein_coding processed_transcript MGP_NODShiLtJ_T0008299.1 MGP_NODShiLtJ_G0006733.1 mouse_genomes_project 5 143609922 143613882 - Gm42945 lincRNA lincRNA MGP_NODShiLtJ_T0008300.1 MGP_NODShiLtJ_G0006733.1 mouse_genomes_project 5 143609936 143617366 - Gm42945 lincRNA lincRNA MGP_NODShiLtJ_T0008113.1 MGP_NODShiLtJ_G0006605.1 mouse_genomes_project 5 86212115 86217630 - Gm15831 lincRNA lincRNA MGP_NODShiLtJ_T0014943.1 MGP_NODShiLtJ_G0013051.1 mouse_genomes_project 5 100893244 100893599 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075007.1 MGP_NODShiLtJ_G0030064.1 mouse_genomes_project 5 157046133 157047441 + MGP_NODShiLtJ_P0075007 Mblac1 protein_coding protein_coding MGP_NODShiLtJ_T0074064.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141949959 142014598 - MGP_NODShiLtJ_P0074064 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074065.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141949965 142013501 - MGP_NODShiLtJ_P0074065 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074066.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141955851 142001496 - MGP_NODShiLtJ_P0074066 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074067.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141958605 141968860 - Sbno1 protein_coding retained_intron MGP_NODShiLtJ_T0074068.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141971363 141972330 - Sbno1 protein_coding retained_intron MGP_NODShiLtJ_T0074069.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141976401 141977053 - Sbno1 protein_coding retained_intron MGP_NODShiLtJ_T0074070.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141977049 141978561 - Sbno1 protein_coding retained_intron MGP_NODShiLtJ_T0074071.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141979096 142013484 - MGP_NODShiLtJ_P0074071 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074072.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141979112 141982404 - Sbno1 protein_coding retained_intron MGP_NODShiLtJ_T0074073.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141979114 142014685 - MGP_NODShiLtJ_P0074073 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074074.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141982069 141983269 - Sbno1 protein_coding retained_intron MGP_NODShiLtJ_T0074075.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141982069 142014641 - MGP_NODShiLtJ_P0074075 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074076.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141984752 142013483 - MGP_NODShiLtJ_P0074076 Sbno1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074077.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141986125 141991852 - MGP_NODShiLtJ_P0074077 Sbno1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074078.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141993224 142013475 - MGP_NODShiLtJ_P0074078 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074079.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141997094 142013459 - MGP_NODShiLtJ_P0074079 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074080.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 141997326 142007794 - MGP_NODShiLtJ_P0074080 Sbno1 protein_coding protein_coding MGP_NODShiLtJ_T0074081.1 MGP_NODShiLtJ_G0029894.1 mouse_genomes_project 5 142011408 142013434 - Sbno1 protein_coding retained_intron MGP_NODShiLtJ_T0015053.1 MGP_NODShiLtJ_G0013161.1 mouse_genomes_project 5 156667076 156667464 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074544.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153495972 153530945 + Mlxipl protein_coding processed_transcript MGP_NODShiLtJ_T0074545.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153514909 153532201 + Mlxipl protein_coding retained_intron MGP_NODShiLtJ_T0074546.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153514920 153532852 + MGP_NODShiLtJ_P0074546 Mlxipl protein_coding protein_coding MGP_NODShiLtJ_T0074547.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153514922 153548474 + MGP_NODShiLtJ_P0074547 Mlxipl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074548.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153514931 153548474 + MGP_NODShiLtJ_P0074548 Mlxipl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074549.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153514931 153548474 + MGP_NODShiLtJ_P0074549 Mlxipl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074550.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153514931 153548474 + MGP_NODShiLtJ_P0074550 Mlxipl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074551.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153514936 153548934 + MGP_NODShiLtJ_P0074551 Mlxipl protein_coding protein_coding MGP_NODShiLtJ_T0074552.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153544161 153545162 + MGP_NODShiLtJ_P0074552 Mlxipl protein_coding protein_coding MGP_NODShiLtJ_T0074553.1 MGP_NODShiLtJ_G0029976.1 mouse_genomes_project 5 153544182 153546290 + MGP_NODShiLtJ_P0074553 Mlxipl protein_coding protein_coding MGP_NODShiLtJ_T0010593.1 MGP_NODShiLtJ_G0008726.1 mouse_genomes_project 5 112686062 112686171 - Mir703 miRNA miRNA MGP_NODShiLtJ_T0072615.1 MGP_NODShiLtJ_G0029623.1 mouse_genomes_project 5 120060242 120121347 - MGP_NODShiLtJ_P0072615 Gbp9 protein_coding protein_coding MGP_NODShiLtJ_T0072616.1 MGP_NODShiLtJ_G0029623.1 mouse_genomes_project 5 120060243 120121348 - Gbp9 protein_coding retained_intron MGP_NODShiLtJ_T0072617.1 MGP_NODShiLtJ_G0029623.1 mouse_genomes_project 5 120061720 120447308 - MGP_NODShiLtJ_P0072617 Gbp9 protein_coding protein_coding MGP_NODShiLtJ_T0071138.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40523878 40561701 - MGP_NODShiLtJ_P0071138 Wdr1 protein_coding protein_coding MGP_NODShiLtJ_T0071139.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40524645 40527192 - Wdr1 protein_coding retained_intron MGP_NODShiLtJ_T0071140.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40524786 40527080 - Wdr1 protein_coding retained_intron MGP_NODShiLtJ_T0071141.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40526260 40526916 - Wdr1 protein_coding retained_intron MGP_NODShiLtJ_T0071142.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40527033 40529062 - Wdr1 protein_coding processed_transcript MGP_NODShiLtJ_T0071143.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40537022 40561426 - MGP_NODShiLtJ_P0071143 Wdr1 protein_coding protein_coding MGP_NODShiLtJ_T0071144.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40540080 40561445 - Wdr1 protein_coding retained_intron MGP_NODShiLtJ_T0071145.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40545569 40563327 - Wdr1 protein_coding processed_transcript MGP_NODShiLtJ_T0071146.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40551116 40561701 - Wdr1 protein_coding retained_intron MGP_NODShiLtJ_T0071147.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40557529 40561438 - Wdr1 protein_coding retained_intron MGP_NODShiLtJ_T0071148.1 MGP_NODShiLtJ_G0029316.1 mouse_genomes_project 5 40560803 40561470 - Wdr1 protein_coding retained_intron MGP_NODShiLtJ_T0073861.1 MGP_NODShiLtJ_G0029861.1 mouse_genomes_project 5 140411698 140427027 + MGP_NODShiLtJ_P0073861 Orai1 protein_coding protein_coding MGP_NODShiLtJ_T0073862.1 MGP_NODShiLtJ_G0029861.1 mouse_genomes_project 5 140411698 140427327 + MGP_NODShiLtJ_P0073862 Orai1 protein_coding protein_coding MGP_NODShiLtJ_T0073863.1 MGP_NODShiLtJ_G0029861.1 mouse_genomes_project 5 140411962 140426361 + Orai1 protein_coding processed_transcript MGP_NODShiLtJ_T0069801.1 MGP_NODShiLtJ_G0029088.1 mouse_genomes_project 5 6036131 6074732 + MGP_NODShiLtJ_P0069801 Slc25a40 protein_coding protein_coding MGP_NODShiLtJ_T0069802.1 MGP_NODShiLtJ_G0029088.1 mouse_genomes_project 5 6036139 6041937 + Slc25a40 protein_coding retained_intron MGP_NODShiLtJ_T0069803.1 MGP_NODShiLtJ_G0029088.1 mouse_genomes_project 5 6036139 6074724 + MGP_NODShiLtJ_P0069803 Slc25a40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069804.1 MGP_NODShiLtJ_G0029088.1 mouse_genomes_project 5 6036154 6074683 + Slc25a40 protein_coding retained_intron MGP_NODShiLtJ_T0069805.1 MGP_NODShiLtJ_G0029088.1 mouse_genomes_project 5 6036180 6074665 + MGP_NODShiLtJ_P0069805 Slc25a40 protein_coding protein_coding MGP_NODShiLtJ_T0069806.1 MGP_NODShiLtJ_G0029088.1 mouse_genomes_project 5 6038119 6061018 + MGP_NODShiLtJ_P0069806 Slc25a40 protein_coding protein_coding MGP_NODShiLtJ_T0069807.1 MGP_NODShiLtJ_G0029088.1 mouse_genomes_project 5 6043491 6043913 + Slc25a40 protein_coding retained_intron MGP_NODShiLtJ_T0069808.1 MGP_NODShiLtJ_G0029088.1 mouse_genomes_project 5 6062350 6068498 + Slc25a40 protein_coding retained_intron MGP_NODShiLtJ_T0014974.1 MGP_NODShiLtJ_G0013082.1 mouse_genomes_project 5 116781130 116781900 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014809.1 MGP_NODShiLtJ_G0012917.1 mouse_genomes_project 5 30963864 30964552 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070326.1 MGP_NODShiLtJ_G0029190.1 mouse_genomes_project 5 31483928 31524901 + MGP_NODShiLtJ_P0070326 Drc1 protein_coding protein_coding MGP_NODShiLtJ_T0070327.1 MGP_NODShiLtJ_G0029190.1 mouse_genomes_project 5 31496951 31497940 + Drc1 protein_coding processed_transcript MGP_NODShiLtJ_T0070328.1 MGP_NODShiLtJ_G0029190.1 mouse_genomes_project 5 31501085 31512864 + Drc1 protein_coding processed_transcript MGP_NODShiLtJ_T0070329.1 MGP_NODShiLtJ_G0029190.1 mouse_genomes_project 5 31509323 31513455 + Drc1 protein_coding processed_transcript MGP_NODShiLtJ_T0008144.1 MGP_NODShiLtJ_G0006633.1 mouse_genomes_project 5 111479889 111758914 + 4930467D21Rik lincRNA lincRNA MGP_NODShiLtJ_T0008145.1 MGP_NODShiLtJ_G0006633.1 mouse_genomes_project 5 111479919 111697905 + 4930467D21Rik lincRNA lincRNA MGP_NODShiLtJ_T0004648.1 MGP_NODShiLtJ_G0004020.1 mouse_genomes_project 5 74530880 74531431 - Gm15949 antisense antisense MGP_NODShiLtJ_T0070115.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25169980 25176735 - MGP_NODShiLtJ_P0070115 Fastk protein_coding protein_coding MGP_NODShiLtJ_T0070116.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25169981 25176727 - Fastk protein_coding retained_intron MGP_NODShiLtJ_T0070118.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25172579 25173756 - Fastk protein_coding retained_intron MGP_NODShiLtJ_T0070119.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25172579 25176828 - MGP_NODShiLtJ_P0070119 Fastk protein_coding protein_coding MGP_NODShiLtJ_T0070120.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25172579 25176747 - MGP_NODShiLtJ_P0070120 Fastk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070121.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25172580 25176728 - Fastk protein_coding retained_intron MGP_NODShiLtJ_T0070122.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25172580 25173065 - Fastk protein_coding retained_intron MGP_NODShiLtJ_T0070123.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25172583 25176749 - MGP_NODShiLtJ_P0070123 Fastk protein_coding protein_coding MGP_NODShiLtJ_T0070124.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25173068 25173642 - Fastk protein_coding retained_intron MGP_NODShiLtJ_T0070125.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25173160 25173839 - Fastk protein_coding processed_transcript MGP_NODShiLtJ_T0070126.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25173464 25175499 - Fastk protein_coding retained_intron MGP_NODShiLtJ_T0070127.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25173611 25176779 - Fastk protein_coding processed_transcript MGP_NODShiLtJ_T0070128.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25174841 25176749 - Fastk protein_coding retained_intron MGP_NODShiLtJ_T0070129.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25174909 25176738 - Fastk protein_coding processed_transcript MGP_NODShiLtJ_T0070130.1 MGP_NODShiLtJ_G0029146.1 mouse_genomes_project 5 25175471 25176738 - Fastk protein_coding processed_transcript MGP_NODShiLtJ_T0014999.1 MGP_NODShiLtJ_G0013107.1 mouse_genomes_project 5 124478158 124481258 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074388.1 MGP_NODShiLtJ_G0029953.1 mouse_genomes_project 5 152398005 152445222 + MGP_NODShiLtJ_P0074388 Gatsl2 protein_coding protein_coding MGP_NODShiLtJ_T0074389.1 MGP_NODShiLtJ_G0029953.1 mouse_genomes_project 5 152398297 152445209 + Gatsl2 protein_coding processed_transcript MGP_NODShiLtJ_T0074390.1 MGP_NODShiLtJ_G0029953.1 mouse_genomes_project 5 152435805 152438394 + Gatsl2 protein_coding retained_intron MGP_NODShiLtJ_T0073628.1 MGP_NODShiLtJ_G0029830.1 mouse_genomes_project 5 138723525 138728343 - MGP_NODShiLtJ_P0073628 protein_coding protein_coding MGP_NODShiLtJ_T0101947.1 MGP_NODShiLtJ_G0040115.1 mouse_genomes_project 5 76303806 76330546 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001603.1 MGP_NODShiLtJ_G0001518.1 mouse_genomes_project 5 73313607 73315222 + TEC TEC MGP_NODShiLtJ_T0070143.1 MGP_NODShiLtJ_G0029150.1 mouse_genomes_project 5 25267246 25276579 - MGP_NODShiLtJ_P0070143 Asb10 protein_coding protein_coding MGP_NODShiLtJ_T0070144.1 MGP_NODShiLtJ_G0029150.1 mouse_genomes_project 5 25269705 25277100 - MGP_NODShiLtJ_P0070144 Asb10 protein_coding protein_coding MGP_NODShiLtJ_T0070145.1 MGP_NODShiLtJ_G0029150.1 mouse_genomes_project 5 25269723 25276714 - MGP_NODShiLtJ_P0070145 Asb10 protein_coding protein_coding MGP_NODShiLtJ_T0014855.1 MGP_NODShiLtJ_G0012963.1 mouse_genomes_project 5 54149660 54150402 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074304.1 MGP_NODShiLtJ_G0029938.1 mouse_genomes_project 5 147952697 148001389 + MGP_NODShiLtJ_P0074304 protein_coding protein_coding MGP_NODShiLtJ_T0074305.1 MGP_NODShiLtJ_G0029938.1 mouse_genomes_project 5 147952762 148001968 + MGP_NODShiLtJ_P0074305 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074306.1 MGP_NODShiLtJ_G0029938.1 mouse_genomes_project 5 147991664 148002355 + MGP_NODShiLtJ_P0074306 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001416.1 MGP_NODShiLtJ_G0001335.1 mouse_genomes_project 5 11141663 11145252 + TEC TEC MGP_NODShiLtJ_T0008196.1 MGP_NODShiLtJ_G0006670.1 mouse_genomes_project 5 123777389 123779300 + Gm10419 lincRNA lincRNA MGP_NODShiLtJ_T0008197.1 MGP_NODShiLtJ_G0006670.1 mouse_genomes_project 5 123777411 123782428 + Gm10419 lincRNA lincRNA MGP_NODShiLtJ_T0008198.1 MGP_NODShiLtJ_G0006670.1 mouse_genomes_project 5 123777856 123785483 + Gm10419 lincRNA lincRNA MGP_NODShiLtJ_T0008199.1 MGP_NODShiLtJ_G0006670.1 mouse_genomes_project 5 123779478 123787849 + Gm10419 lincRNA lincRNA MGP_NODShiLtJ_T0008200.1 MGP_NODShiLtJ_G0006670.1 mouse_genomes_project 5 123780482 123782429 + Gm10419 lincRNA lincRNA MGP_NODShiLtJ_T0073877.1 MGP_NODShiLtJ_G0029864.1 mouse_genomes_project 5 140526377 140557973 - MGP_NODShiLtJ_P0073877 Rhof protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073878.1 MGP_NODShiLtJ_G0029864.1 mouse_genomes_project 5 140526377 140557908 - MGP_NODShiLtJ_P0073878 Rhof protein_coding protein_coding MGP_NODShiLtJ_T0073879.1 MGP_NODShiLtJ_G0029864.1 mouse_genomes_project 5 140535912 140557941 - Rhof protein_coding processed_transcript MGP_NODShiLtJ_T0073880.1 MGP_NODShiLtJ_G0029864.1 mouse_genomes_project 5 140543871 140558204 - MGP_NODShiLtJ_P0073880 Rhof protein_coding protein_coding MGP_NODShiLtJ_T0001623.1 MGP_NODShiLtJ_G0001538.1 mouse_genomes_project 5 74688402 74693686 + TEC TEC MGP_NODShiLtJ_T0001779.1 MGP_NODShiLtJ_G0001693.1 mouse_genomes_project 5 141185518 141186857 - TEC TEC MGP_NODShiLtJ_T0101147.1 MGP_NODShiLtJ_G0039478.1 mouse_genomes_project 5 54324747 54327687 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0073113.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130123589 130190390 - MGP_NODShiLtJ_P0073113 Coro1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073114.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130123589 130190443 - MGP_NODShiLtJ_P0073114 Coro1c protein_coding protein_coding MGP_NODShiLtJ_T0073115.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130126392 130133405 - Coro1c protein_coding retained_intron MGP_NODShiLtJ_T0073116.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130126403 130132408 - Coro1c protein_coding retained_intron MGP_NODShiLtJ_T0073117.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130127338 130128770 - Coro1c protein_coding retained_intron MGP_NODShiLtJ_T0073118.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130129257 130132213 - Coro1c protein_coding retained_intron MGP_NODShiLtJ_T0073119.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130129690 130158949 - Coro1c protein_coding processed_transcript MGP_NODShiLtJ_T0073120.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130129749 130141317 - Coro1c protein_coding processed_transcript MGP_NODShiLtJ_T0073121.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130148243 130167241 - MGP_NODShiLtJ_P0073121 Coro1c protein_coding protein_coding MGP_NODShiLtJ_T0073122.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130148301 130166727 - MGP_NODShiLtJ_P0073122 Coro1c protein_coding protein_coding MGP_NODShiLtJ_T0073123.1 MGP_NODShiLtJ_G0029727.1 mouse_genomes_project 5 130161363 130190330 - Coro1c protein_coding retained_intron MGP_NODShiLtJ_T0008021.1 MGP_NODShiLtJ_G0006536.1 mouse_genomes_project 5 36062111 36081134 - Gm43458 lincRNA lincRNA MGP_NODShiLtJ_T0001728.1 MGP_NODShiLtJ_G0001642.1 mouse_genomes_project 5 129539586 129540786 - TEC TEC MGP_NODShiLtJ_T0070335.1 MGP_NODShiLtJ_G0029192.1 mouse_genomes_project 5 31638204 31654350 + MGP_NODShiLtJ_P0070335 1700001C02Rik protein_coding protein_coding MGP_NODShiLtJ_T0070336.1 MGP_NODShiLtJ_G0029192.1 mouse_genomes_project 5 31638212 31657495 + MGP_NODShiLtJ_P0070336 1700001C02Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070337.1 MGP_NODShiLtJ_G0029192.1 mouse_genomes_project 5 31638216 31657539 + MGP_NODShiLtJ_P0070337 1700001C02Rik protein_coding protein_coding MGP_NODShiLtJ_T0070338.1 MGP_NODShiLtJ_G0029192.1 mouse_genomes_project 5 31638241 31657518 + MGP_NODShiLtJ_P0070338 1700001C02Rik protein_coding protein_coding MGP_NODShiLtJ_T0100605.1 MGP_NODShiLtJ_G0038999.1 mouse_genomes_project 5 38541668 38541792 + snoRNA snoRNA MGP_NODShiLtJ_T0101156.1 MGP_NODShiLtJ_G0039485.1 mouse_genomes_project 5 85204392 85204862 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0071065.1 MGP_NODShiLtJ_G0029303.1 mouse_genomes_project 5 39214768 39252308 - MGP_NODShiLtJ_P0071065 Evc protein_coding protein_coding MGP_NODShiLtJ_T0071066.1 MGP_NODShiLtJ_G0029303.1 mouse_genomes_project 5 39215325 39222744 - MGP_NODShiLtJ_P0071066 Evc protein_coding protein_coding MGP_NODShiLtJ_T0071067.1 MGP_NODShiLtJ_G0029303.1 mouse_genomes_project 5 39216042 39227877 - Evc protein_coding retained_intron MGP_NODShiLtJ_T0071068.1 MGP_NODShiLtJ_G0029303.1 mouse_genomes_project 5 39216087 39217217 - MGP_NODShiLtJ_P0071068 Evc protein_coding protein_coding MGP_NODShiLtJ_T0071069.1 MGP_NODShiLtJ_G0029303.1 mouse_genomes_project 5 39228781 39252381 - MGP_NODShiLtJ_P0071069 Evc protein_coding protein_coding MGP_NODShiLtJ_T0071070.1 MGP_NODShiLtJ_G0029303.1 mouse_genomes_project 5 39230077 39233885 - Evc protein_coding retained_intron MGP_NODShiLtJ_T0071071.1 MGP_NODShiLtJ_G0029303.1 mouse_genomes_project 5 39231728 39234004 - Evc protein_coding retained_intron MGP_NODShiLtJ_T0071072.1 MGP_NODShiLtJ_G0029303.1 mouse_genomes_project 5 39234703 39252393 - Evc protein_coding retained_intron MGP_NODShiLtJ_T0072930.1 MGP_NODShiLtJ_G0029690.1 mouse_genomes_project 5 126533213 126610264 + MGP_NODShiLtJ_P0072930 Galnt9 protein_coding protein_coding MGP_NODShiLtJ_T0072931.1 MGP_NODShiLtJ_G0029690.1 mouse_genomes_project 5 126592332 126610266 + MGP_NODShiLtJ_P0072931 Galnt9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072932.1 MGP_NODShiLtJ_G0029690.1 mouse_genomes_project 5 126592333 126610269 + MGP_NODShiLtJ_P0072932 Galnt9 protein_coding protein_coding MGP_NODShiLtJ_T0001472.1 MGP_NODShiLtJ_G0001388.1 mouse_genomes_project 5 36234578 36238107 + TEC TEC MGP_NODShiLtJ_T0099374.1 MGP_NODShiLtJ_G0037768.1 mouse_genomes_project 5 106264784 106264892 - Gm25521 snRNA snRNA MGP_NODShiLtJ_T0070146.1 MGP_NODShiLtJ_G0029151.1 mouse_genomes_project 5 25280673 25293728 - MGP_NODShiLtJ_P0070146 4931409K22Rik protein_coding protein_coding MGP_NODShiLtJ_T0070147.1 MGP_NODShiLtJ_G0029151.1 mouse_genomes_project 5 25280673 25293728 - MGP_NODShiLtJ_P0070147 4931409K22Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070148.1 MGP_NODShiLtJ_G0029151.1 mouse_genomes_project 5 25280689 25290952 - 4931409K22Rik protein_coding retained_intron MGP_NODShiLtJ_T0070149.1 MGP_NODShiLtJ_G0029151.1 mouse_genomes_project 5 25290953 25293787 - MGP_NODShiLtJ_P0070149 4931409K22Rik protein_coding protein_coding MGP_NODShiLtJ_T0070150.1 MGP_NODShiLtJ_G0029151.1 mouse_genomes_project 5 25290962 25295135 - 4931409K22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0004672.1 MGP_NODShiLtJ_G0004041.1 mouse_genomes_project 5 100642859 100645724 + BC051076 antisense antisense MGP_NODShiLtJ_T0004673.1 MGP_NODShiLtJ_G0004041.1 mouse_genomes_project 5 100642859 100645727 + BC051076 antisense antisense MGP_NODShiLtJ_T0001552.1 MGP_NODShiLtJ_G0001468.1 mouse_genomes_project 5 55285710 55287640 + TEC TEC MGP_NODShiLtJ_T0075195.1 MGP_NODShiLtJ_G0030103.1 mouse_genomes_project 5 159776296 159801427 + MGP_NODShiLtJ_P0075195 Chst12 protein_coding protein_coding MGP_NODShiLtJ_T0075196.1 MGP_NODShiLtJ_G0030103.1 mouse_genomes_project 5 159776321 159799506 + MGP_NODShiLtJ_P0075196 Chst12 protein_coding protein_coding MGP_NODShiLtJ_T0098401.1 MGP_NODShiLtJ_G0036806.1 mouse_genomes_project 5 51273418 51275558 + Gm20475 sense_intronic sense_intronic MGP_NODShiLtJ_T0070100.1 MGP_NODShiLtJ_G0029144.1 mouse_genomes_project 5 25148397 25153687 - MGP_NODShiLtJ_P0070100 Cdk5 protein_coding protein_coding MGP_NODShiLtJ_T0070101.1 MGP_NODShiLtJ_G0029144.1 mouse_genomes_project 5 25149532 25153642 - MGP_NODShiLtJ_P0070101 Cdk5 protein_coding protein_coding MGP_NODShiLtJ_T0070102.1 MGP_NODShiLtJ_G0029144.1 mouse_genomes_project 5 25151155 25152852 - Cdk5 protein_coding retained_intron MGP_NODShiLtJ_T0101140.1 MGP_NODShiLtJ_G0039473.1 mouse_genomes_project 5 23504575 23505138 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0074512.1 MGP_NODShiLtJ_G0029969.1 mouse_genomes_project 5 153320581 153322391 - MGP_NODShiLtJ_P0074512 Cldn4 protein_coding protein_coding MGP_NODShiLtJ_T0001749.1 MGP_NODShiLtJ_G0001663.1 mouse_genomes_project 5 135466124 135467144 + TEC TEC MGP_NODShiLtJ_T0018059.1 MGP_NODShiLtJ_G0015484.1 mouse_genomes_project 5 169761177 169835194 + Gm20488 processed_transcript processed_transcript MGP_NODShiLtJ_T0015073.1 MGP_NODShiLtJ_G0013181.1 mouse_genomes_project 5 162971473 162972010 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004725.1 MGP_NODShiLtJ_G0004075.1 mouse_genomes_project 5 131062592 131063159 - Gm42789 antisense antisense MGP_NODShiLtJ_T0014898.1 MGP_NODShiLtJ_G0013006.1 mouse_genomes_project 5 75044854 75045146 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004592.1 MGP_NODShiLtJ_G0003976.1 mouse_genomes_project 5 28533161 28534486 - Gm16058 antisense antisense MGP_NODShiLtJ_T0098205.1 MGP_NODShiLtJ_G0036617.1 mouse_genomes_project 5 105622025 105622163 + Gm26039 scaRNA scaRNA MGP_NODShiLtJ_T0075614.1 MGP_NODShiLtJ_G0030199.1 mouse_genomes_project 5 167725299 167913943 - MGP_NODShiLtJ_P0075614 Flt1 protein_coding protein_coding MGP_NODShiLtJ_T0075615.1 MGP_NODShiLtJ_G0030199.1 mouse_genomes_project 5 167775077 167814939 - Flt1 protein_coding processed_transcript MGP_NODShiLtJ_T0075616.1 MGP_NODShiLtJ_G0030199.1 mouse_genomes_project 5 167791159 167791646 - Flt1 protein_coding processed_transcript MGP_NODShiLtJ_T0075617.1 MGP_NODShiLtJ_G0030199.1 mouse_genomes_project 5 167815679 167913920 - MGP_NODShiLtJ_P0075617 Flt1 protein_coding protein_coding MGP_NODShiLtJ_T0075618.1 MGP_NODShiLtJ_G0030199.1 mouse_genomes_project 5 167827136 167829160 - Flt1 protein_coding retained_intron MGP_NODShiLtJ_T0075619.1 MGP_NODShiLtJ_G0030199.1 mouse_genomes_project 5 167836644 167913920 - Flt1 protein_coding processed_transcript MGP_NODShiLtJ_T0008301.1 MGP_NODShiLtJ_G0006734.1 mouse_genomes_project 5 143615049 143639748 + Gm42952 lincRNA lincRNA MGP_NODShiLtJ_T0008302.1 MGP_NODShiLtJ_G0006734.1 mouse_genomes_project 5 143618676 143639949 + Gm42952 lincRNA lincRNA MGP_NODShiLtJ_T0008303.1 MGP_NODShiLtJ_G0006734.1 mouse_genomes_project 5 143618688 143633340 + Gm42952 lincRNA lincRNA MGP_NODShiLtJ_T0008304.1 MGP_NODShiLtJ_G0006734.1 mouse_genomes_project 5 143618693 143631995 + Gm42952 lincRNA lincRNA MGP_NODShiLtJ_T0008305.1 MGP_NODShiLtJ_G0006734.1 mouse_genomes_project 5 143618698 143639892 + Gm42952 lincRNA lincRNA MGP_NODShiLtJ_T0008306.1 MGP_NODShiLtJ_G0006734.1 mouse_genomes_project 5 143618712 143632971 + Gm42952 lincRNA lincRNA MGP_NODShiLtJ_T0008215.1 MGP_NODShiLtJ_G0006678.1 mouse_genomes_project 5 127790066 127819270 - E130006D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0008216.1 MGP_NODShiLtJ_G0006678.1 mouse_genomes_project 5 127790085 127819292 - E130006D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0008217.1 MGP_NODShiLtJ_G0006678.1 mouse_genomes_project 5 127790192 127819267 - E130006D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0001570.1 MGP_NODShiLtJ_G0001486.1 mouse_genomes_project 5 63074492 63076670 + TEC TEC MGP_NODShiLtJ_T0071460.1 MGP_NODShiLtJ_G0029376.1 mouse_genomes_project 5 72575281 72643586 + MGP_NODShiLtJ_P0071460 Wdr19 protein_coding protein_coding MGP_NODShiLtJ_T0071461.1 MGP_NODShiLtJ_G0029376.1 mouse_genomes_project 5 72575283 72643595 + MGP_NODShiLtJ_P0071461 Wdr19 protein_coding protein_coding MGP_NODShiLtJ_T0071462.1 MGP_NODShiLtJ_G0029376.1 mouse_genomes_project 5 72575285 72580900 + Wdr19 protein_coding retained_intron MGP_NODShiLtJ_T0071463.1 MGP_NODShiLtJ_G0029376.1 mouse_genomes_project 5 72575302 72626913 + Wdr19 protein_coding retained_intron MGP_NODShiLtJ_T0071464.1 MGP_NODShiLtJ_G0029376.1 mouse_genomes_project 5 72575316 72609899 + Wdr19 protein_coding retained_intron MGP_NODShiLtJ_T0071465.1 MGP_NODShiLtJ_G0029376.1 mouse_genomes_project 5 72575325 72603188 + Wdr19 protein_coding retained_intron MGP_NODShiLtJ_T0071466.1 MGP_NODShiLtJ_G0029376.1 mouse_genomes_project 5 72578200 72643590 + Wdr19 protein_coding retained_intron MGP_NODShiLtJ_T0071467.1 MGP_NODShiLtJ_G0029376.1 mouse_genomes_project 5 72639604 72643589 + MGP_NODShiLtJ_P0071467 Wdr19 protein_coding protein_coding MGP_NODShiLtJ_T0008409.1 MGP_NODShiLtJ_G0006808.1 mouse_genomes_project 5 171393246 171439802 + Gm43299 lincRNA lincRNA MGP_NODShiLtJ_T0004644.1 MGP_NODShiLtJ_G0004017.1 mouse_genomes_project 5 73633314 73661279 + Gm26725 antisense antisense MGP_NODShiLtJ_T0075490.1 MGP_NODShiLtJ_G0030164.1 mouse_genomes_project 5 164855069 164865809 - MGP_NODShiLtJ_P0075490 Atp5j2 protein_coding protein_coding MGP_NODShiLtJ_T0075491.1 MGP_NODShiLtJ_G0030164.1 mouse_genomes_project 5 164855077 164865339 - MGP_NODShiLtJ_P0075491 Atp5j2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075492.1 MGP_NODShiLtJ_G0030164.1 mouse_genomes_project 5 164855080 164865339 - MGP_NODShiLtJ_P0075492 Atp5j2 protein_coding protein_coding MGP_NODShiLtJ_T0075493.1 MGP_NODShiLtJ_G0030164.1 mouse_genomes_project 5 164855757 164865258 - MGP_NODShiLtJ_P0075493 Atp5j2 protein_coding protein_coding MGP_NODShiLtJ_T0075494.1 MGP_NODShiLtJ_G0030164.1 mouse_genomes_project 5 164863174 164865275 - Atp5j2 protein_coding retained_intron MGP_NODShiLtJ_T0001744.1 MGP_NODShiLtJ_G0001658.1 mouse_genomes_project 5 134247311 134248274 + TEC TEC MGP_NODShiLtJ_T0008122.1 MGP_NODShiLtJ_G0006611.1 mouse_genomes_project 5 95972222 95976016 + Gm43532 lincRNA lincRNA MGP_NODShiLtJ_T0072359.1 MGP_NODShiLtJ_G0029563.1 mouse_genomes_project 5 109876712 109880830 + MGP_NODShiLtJ_P0072359 Cxcl13 protein_coding protein_coding MGP_NODShiLtJ_T0001784.1 MGP_NODShiLtJ_G0001698.1 mouse_genomes_project 5 142012588 142015434 + TEC TEC MGP_NODShiLtJ_T0001785.1 MGP_NODShiLtJ_G0001698.1 mouse_genomes_project 5 142014390 142015563 + TEC TEC MGP_NODShiLtJ_T0008276.1 MGP_NODShiLtJ_G0006719.1 mouse_genomes_project 5 136898924 136903091 + Gm43277 lincRNA lincRNA MGP_NODShiLtJ_T0001818.1 MGP_NODShiLtJ_G0001731.1 mouse_genomes_project 5 150132950 150133923 - TEC TEC MGP_NODShiLtJ_T0014863.1 MGP_NODShiLtJ_G0012971.1 mouse_genomes_project 5 59978948 59979255 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071597.1 MGP_NODShiLtJ_G0029393.1 mouse_genomes_project 5 74206739 74220139 + MGP_NODShiLtJ_P0071597 Uchl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0071598.1 MGP_NODShiLtJ_G0029393.1 mouse_genomes_project 5 74207348 74207956 + Uchl1 protein_coding retained_intron MGP_NODShiLtJ_T0071599.1 MGP_NODShiLtJ_G0029393.1 mouse_genomes_project 5 74208002 74220133 + Uchl1 protein_coding retained_intron MGP_NODShiLtJ_T0071600.1 MGP_NODShiLtJ_G0029393.1 mouse_genomes_project 5 74216591 74219841 + Uchl1 protein_coding retained_intron MGP_NODShiLtJ_T0008254.1 MGP_NODShiLtJ_G0006701.1 mouse_genomes_project 5 132907499 132915360 + B230112J18Rik lincRNA lincRNA MGP_NODShiLtJ_T0072488.1 MGP_NODShiLtJ_G0029590.1 mouse_genomes_project 5 115166509 115186031 - MGP_NODShiLtJ_P0072488 Coq2 protein_coding protein_coding MGP_NODShiLtJ_T0072489.1 MGP_NODShiLtJ_G0029590.1 mouse_genomes_project 5 115167044 115185946 - MGP_NODShiLtJ_P0072489 Coq2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072490.1 MGP_NODShiLtJ_G0029590.1 mouse_genomes_project 5 115169732 115186039 - MGP_NODShiLtJ_P0072490 Coq2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001432.1 MGP_NODShiLtJ_G0001351.1 mouse_genomes_project 5 16144392 16146310 + TEC TEC MGP_NODShiLtJ_T0004737.1 MGP_NODShiLtJ_G0004084.1 mouse_genomes_project 5 132850890 132851819 + Gm13837 antisense antisense MGP_NODShiLtJ_T0099383.1 MGP_NODShiLtJ_G0037777.1 mouse_genomes_project 5 121883793 121883915 + Gm24191 snRNA snRNA MGP_NODShiLtJ_T0075571.1 MGP_NODShiLtJ_G0030190.1 mouse_genomes_project 5 167052326 167065746 - MGP_NODShiLtJ_P0075571 Mtif3 protein_coding protein_coding MGP_NODShiLtJ_T0075572.1 MGP_NODShiLtJ_G0030190.1 mouse_genomes_project 5 167055273 167065748 - MGP_NODShiLtJ_P0075572 Mtif3 protein_coding protein_coding MGP_NODShiLtJ_T0075573.1 MGP_NODShiLtJ_G0030190.1 mouse_genomes_project 5 167056120 167065758 - MGP_NODShiLtJ_P0075573 Mtif3 protein_coding protein_coding MGP_NODShiLtJ_T0075574.1 MGP_NODShiLtJ_G0030190.1 mouse_genomes_project 5 167056120 167065710 - MGP_NODShiLtJ_P0075574 Mtif3 protein_coding protein_coding MGP_NODShiLtJ_T0075575.1 MGP_NODShiLtJ_G0030190.1 mouse_genomes_project 5 167060897 167065704 - MGP_NODShiLtJ_P0075575 Mtif3 protein_coding protein_coding MGP_NODShiLtJ_T0075576.1 MGP_NODShiLtJ_G0030190.1 mouse_genomes_project 5 167060908 167065761 - MGP_NODShiLtJ_P0075576 Mtif3 protein_coding protein_coding MGP_NODShiLtJ_T0099333.1 MGP_NODShiLtJ_G0037727.1 mouse_genomes_project 5 7541266 7541368 - Gm23312 snRNA snRNA MGP_NODShiLtJ_T0070809.1 MGP_NODShiLtJ_G0029265.1 mouse_genomes_project 5 35937998 36038982 - MGP_NODShiLtJ_P0070809 Zfyve28 protein_coding protein_coding MGP_NODShiLtJ_T0070810.1 MGP_NODShiLtJ_G0029265.1 mouse_genomes_project 5 35968719 35983733 - Zfyve28 protein_coding retained_intron MGP_NODShiLtJ_T0070811.1 MGP_NODShiLtJ_G0029265.1 mouse_genomes_project 5 35968804 35984195 - Zfyve28 protein_coding processed_transcript MGP_NODShiLtJ_T0070812.1 MGP_NODShiLtJ_G0029265.1 mouse_genomes_project 5 35973021 35994733 - Zfyve28 protein_coding retained_intron MGP_NODShiLtJ_T0070813.1 MGP_NODShiLtJ_G0029265.1 mouse_genomes_project 5 35977742 36039105 - Zfyve28 protein_coding processed_transcript MGP_NODShiLtJ_T0070814.1 MGP_NODShiLtJ_G0029265.1 mouse_genomes_project 5 35985588 36039093 - MGP_NODShiLtJ_P0070814 Zfyve28 protein_coding protein_coding MGP_NODShiLtJ_T0001526.1 MGP_NODShiLtJ_G0001442.1 mouse_genomes_project 5 52096058 52100032 - TEC TEC MGP_NODShiLtJ_T0008321.1 MGP_NODShiLtJ_G0006745.1 mouse_genomes_project 5 146302706 146306883 + Gm42495 lincRNA lincRNA MGP_NODShiLtJ_T0014907.1 MGP_NODShiLtJ_G0013015.1 mouse_genomes_project 5 81292607 81292866 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010601.1 MGP_NODShiLtJ_G0008734.1 mouse_genomes_project 5 129556766 129556822 - Mir7230 miRNA miRNA MGP_NODShiLtJ_T0001438.1 MGP_NODShiLtJ_G0001357.1 mouse_genomes_project 5 23429444 23435888 - TEC TEC MGP_NODShiLtJ_T0072047.1 MGP_NODShiLtJ_G0029474.1 mouse_genomes_project 5 98741840 98893257 - MGP_NODShiLtJ_P0072047 Tmprss11f protein_coding protein_coding MGP_NODShiLtJ_T0072048.1 MGP_NODShiLtJ_G0029474.1 mouse_genomes_project 5 98797873 98893257 - Tmprss11f protein_coding processed_transcript MGP_NODShiLtJ_T0072049.1 MGP_NODShiLtJ_G0029474.1 mouse_genomes_project 5 98843600 98893216 - Tmprss11f protein_coding retained_intron MGP_NODShiLtJ_T0015019.1 MGP_NODShiLtJ_G0013127.1 mouse_genomes_project 5 131465490 131466873 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069692.1 MGP_NODShiLtJ_G0029072.1 mouse_genomes_project 5 1790923 1795121 - MGP_NODShiLtJ_P0069692 Fzd1 protein_coding protein_coding MGP_NODShiLtJ_T0070054.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24451271 24453570 + MGP_NODShiLtJ_P0070054 Rint1 protein_coding protein_coding MGP_NODShiLtJ_T0070055.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24451271 24491537 + MGP_NODShiLtJ_P0070055 Rint1 protein_coding protein_coding MGP_NODShiLtJ_T0070056.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24451272 24457401 + MGP_NODShiLtJ_P0070056 Rint1 protein_coding protein_coding MGP_NODShiLtJ_T0070057.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24451275 24491465 + MGP_NODShiLtJ_P0070057 Rint1 protein_coding protein_coding MGP_NODShiLtJ_T0070058.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24451279 24491536 + Rint1 protein_coding retained_intron MGP_NODShiLtJ_T0070059.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24451281 24453595 + Rint1 protein_coding retained_intron MGP_NODShiLtJ_T0070060.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24451301 24462414 + Rint1 protein_coding processed_transcript MGP_NODShiLtJ_T0070061.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24471285 24475729 + Rint1 protein_coding retained_intron MGP_NODShiLtJ_T0070062.1 MGP_NODShiLtJ_G0029134.1 mouse_genomes_project 5 24477324 24485862 + Rint1 protein_coding processed_transcript MGP_NODShiLtJ_T0014977.1 MGP_NODShiLtJ_G0013085.1 mouse_genomes_project 5 117949341 117949929 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070212.1 MGP_NODShiLtJ_G0029166.1 mouse_genomes_project 5 26630566 26651353 + Actr3b protein_coding processed_transcript MGP_NODShiLtJ_T0070213.1 MGP_NODShiLtJ_G0029166.1 mouse_genomes_project 5 26630612 26732099 + MGP_NODShiLtJ_P0070213 Actr3b protein_coding protein_coding MGP_NODShiLtJ_T0001681.1 MGP_NODShiLtJ_G0001595.1 mouse_genomes_project 5 110903023 110906257 + TEC TEC MGP_NODShiLtJ_T0070269.1 MGP_NODShiLtJ_G0029179.1 mouse_genomes_project 5 30687363 30807884 + MGP_NODShiLtJ_P0070269 Ube3c protein_coding protein_coding MGP_NODShiLtJ_T0070270.1 MGP_NODShiLtJ_G0029179.1 mouse_genomes_project 5 30687567 30759067 + MGP_NODShiLtJ_P0070270 Ube3c protein_coding protein_coding MGP_NODShiLtJ_T0070271.1 MGP_NODShiLtJ_G0029179.1 mouse_genomes_project 5 30687607 30722089 + Ube3c protein_coding retained_intron MGP_NODShiLtJ_T0070272.1 MGP_NODShiLtJ_G0029179.1 mouse_genomes_project 5 30712901 30722626 + Ube3c protein_coding processed_transcript MGP_NODShiLtJ_T0070273.1 MGP_NODShiLtJ_G0029179.1 mouse_genomes_project 5 30757495 30759067 + Ube3c protein_coding retained_intron MGP_NODShiLtJ_T0014936.1 MGP_NODShiLtJ_G0013044.1 mouse_genomes_project 5 99348632 99349692 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073694.1 MGP_NODShiLtJ_G0029839.1 mouse_genomes_project 5 139144280 139149929 + MGP_NODShiLtJ_P0073694 Fam109a protein_coding protein_coding MGP_NODShiLtJ_T0073695.1 MGP_NODShiLtJ_G0029839.1 mouse_genomes_project 5 139144291 139149896 + MGP_NODShiLtJ_P0073695 Fam109a protein_coding protein_coding MGP_NODShiLtJ_T0073696.1 MGP_NODShiLtJ_G0029839.1 mouse_genomes_project 5 139144301 139148181 + MGP_NODShiLtJ_P0073696 Fam109a protein_coding protein_coding MGP_NODShiLtJ_T0008163.1 MGP_NODShiLtJ_G0006644.1 mouse_genomes_project 5 115437794 115441469 - Gm36793 lincRNA lincRNA MGP_NODShiLtJ_T0014905.1 MGP_NODShiLtJ_G0013013.1 mouse_genomes_project 5 80857880 80858351 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001669.1 MGP_NODShiLtJ_G0001583.1 mouse_genomes_project 5 99763948 99765036 + TEC TEC MGP_NODShiLtJ_T0015096.1 MGP_NODShiLtJ_G0013204.1 mouse_genomes_project 5 168435162 168436641 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100602.1 MGP_NODShiLtJ_G0038996.1 mouse_genomes_project 5 21563952 21564071 - Gm22490 snoRNA snoRNA MGP_NODShiLtJ_T0008279.1 MGP_NODShiLtJ_G0006721.1 mouse_genomes_project 5 137647062 137647772 + Gm15749 lincRNA lincRNA MGP_NODShiLtJ_T0004757.1 MGP_NODShiLtJ_G0004096.1 mouse_genomes_project 5 138582595 138593957 + Gm42917 antisense antisense MGP_NODShiLtJ_T0075361.1 MGP_NODShiLtJ_G0030139.1 mouse_genomes_project 5 163248503 163273047 - MGP_NODShiLtJ_P0075361 Usp42 protein_coding protein_coding MGP_NODShiLtJ_T0075362.1 MGP_NODShiLtJ_G0030139.1 mouse_genomes_project 5 163251930 163253791 - Usp42 protein_coding processed_transcript MGP_NODShiLtJ_T0075363.1 MGP_NODShiLtJ_G0030139.1 mouse_genomes_project 5 163251945 163255365 - Usp42 protein_coding retained_intron MGP_NODShiLtJ_T0075364.1 MGP_NODShiLtJ_G0030139.1 mouse_genomes_project 5 163254581 163267460 - Usp42 protein_coding retained_intron MGP_NODShiLtJ_T0075365.1 MGP_NODShiLtJ_G0030139.1 mouse_genomes_project 5 163259826 163261119 - Usp42 protein_coding retained_intron MGP_NODShiLtJ_T0074724.1 MGP_NODShiLtJ_G0030009.1 mouse_genomes_project 5 155270605 155278258 + MGP_NODShiLtJ_P0074724 Myl10 protein_coding protein_coding MGP_NODShiLtJ_T0074725.1 MGP_NODShiLtJ_G0030009.1 mouse_genomes_project 5 155270637 155278156 + MGP_NODShiLtJ_P0074725 Myl10 protein_coding protein_coding MGP_NODShiLtJ_T0074726.1 MGP_NODShiLtJ_G0030009.1 mouse_genomes_project 5 155271164 155278258 + MGP_NODShiLtJ_P0074726 Myl10 protein_coding protein_coding MGP_NODShiLtJ_T0074727.1 MGP_NODShiLtJ_G0030009.1 mouse_genomes_project 5 155271636 155278258 + MGP_NODShiLtJ_P0074727 Myl10 protein_coding protein_coding MGP_NODShiLtJ_T0074728.1 MGP_NODShiLtJ_G0030009.1 mouse_genomes_project 5 155275109 155278258 + Myl10 protein_coding retained_intron MGP_NODShiLtJ_T0074729.1 MGP_NODShiLtJ_G0030009.1 mouse_genomes_project 5 155275160 155278256 + Myl10 protein_coding retained_intron MGP_NODShiLtJ_T0004807.1 MGP_NODShiLtJ_G0004134.1 mouse_genomes_project 5 156340233 156342631 + Gm36266 antisense antisense MGP_NODShiLtJ_T0001700.1 MGP_NODShiLtJ_G0001614.1 mouse_genomes_project 5 118796084 118798861 - TEC TEC MGP_NODShiLtJ_T0072314.1 MGP_NODShiLtJ_G0029554.1 mouse_genomes_project 5 105754568 105791692 + MGP_NODShiLtJ_P0072314 Fam47e protein_coding protein_coding MGP_NODShiLtJ_T0072315.1 MGP_NODShiLtJ_G0029554.1 mouse_genomes_project 5 105754601 105791592 + MGP_NODShiLtJ_P0072315 Fam47e protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072316.1 MGP_NODShiLtJ_G0029554.1 mouse_genomes_project 5 105770868 105791814 + MGP_NODShiLtJ_P0072316 Fam47e protein_coding protein_coding MGP_NODShiLtJ_T0072317.1 MGP_NODShiLtJ_G0029554.1 mouse_genomes_project 5 105770927 105792210 + MGP_NODShiLtJ_P0072317 Fam47e protein_coding protein_coding MGP_NODShiLtJ_T0072318.1 MGP_NODShiLtJ_G0029554.1 mouse_genomes_project 5 105770928 105792211 + MGP_NODShiLtJ_P0072318 Fam47e protein_coding protein_coding MGP_NODShiLtJ_T0072319.1 MGP_NODShiLtJ_G0029554.1 mouse_genomes_project 5 105770934 105786316 + MGP_NODShiLtJ_P0072319 Fam47e protein_coding protein_coding MGP_NODShiLtJ_T0072320.1 MGP_NODShiLtJ_G0029554.1 mouse_genomes_project 5 105770947 105791663 + MGP_NODShiLtJ_P0072320 Fam47e protein_coding protein_coding MGP_NODShiLtJ_T0100614.1 MGP_NODShiLtJ_G0039008.1 mouse_genomes_project 5 69013255 69013387 - Gm22273 snoRNA snoRNA MGP_NODShiLtJ_T0001754.1 MGP_NODShiLtJ_G0001668.1 mouse_genomes_project 5 136494336 136498339 - TEC TEC MGP_NODShiLtJ_T0072351.1 MGP_NODShiLtJ_G0029561.1 mouse_genomes_project 5 106469063 106476055 + MGP_NODShiLtJ_P0072351 2010109A12Rik protein_coding protein_coding MGP_NODShiLtJ_T0072352.1 MGP_NODShiLtJ_G0029561.1 mouse_genomes_project 5 106469078 106469995 + 2010109A12Rik protein_coding retained_intron MGP_NODShiLtJ_T0001751.1 MGP_NODShiLtJ_G0001665.1 mouse_genomes_project 5 135545775 135547402 + TEC TEC MGP_NODShiLtJ_T0001557.1 MGP_NODShiLtJ_G0001473.1 mouse_genomes_project 5 55735892 55739678 - TEC TEC MGP_NODShiLtJ_T0071179.1 MGP_NODShiLtJ_G0029326.1 mouse_genomes_project 5 46297966 46392875 + MGP_NODShiLtJ_P0071179 Cc2d2a protein_coding protein_coding MGP_NODShiLtJ_T0071180.1 MGP_NODShiLtJ_G0029326.1 mouse_genomes_project 5 46309817 46326572 + Cc2d2a protein_coding retained_intron MGP_NODShiLtJ_T0071181.1 MGP_NODShiLtJ_G0029326.1 mouse_genomes_project 5 46309817 46391220 + MGP_NODShiLtJ_P0071181 Cc2d2a protein_coding protein_coding MGP_NODShiLtJ_T0071182.1 MGP_NODShiLtJ_G0029326.1 mouse_genomes_project 5 46335619 46358689 + Cc2d2a protein_coding retained_intron MGP_NODShiLtJ_T0075389.1 MGP_NODShiLtJ_G0030144.1 mouse_genomes_project 5 163429445 163439618 + MGP_NODShiLtJ_P0075389 Gm42421 protein_coding protein_coding MGP_NODShiLtJ_T0001692.1 MGP_NODShiLtJ_G0001606.1 mouse_genomes_project 5 115411898 115414248 + TEC TEC MGP_NODShiLtJ_T0074495.1 MGP_NODShiLtJ_G0029965.1 mouse_genomes_project 5 153050674 153098318 - MGP_NODShiLtJ_P0074495 Eln protein_coding protein_coding MGP_NODShiLtJ_T0074496.1 MGP_NODShiLtJ_G0029965.1 mouse_genomes_project 5 153050919 153076293 - Eln protein_coding retained_intron MGP_NODShiLtJ_T0074497.1 MGP_NODShiLtJ_G0029965.1 mouse_genomes_project 5 153050919 153098241 - MGP_NODShiLtJ_P0074497 Eln protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074498.1 MGP_NODShiLtJ_G0029965.1 mouse_genomes_project 5 153076595 153080103 - Eln protein_coding retained_intron MGP_NODShiLtJ_T0074499.1 MGP_NODShiLtJ_G0029965.1 mouse_genomes_project 5 153095720 153098248 - Eln protein_coding retained_intron MGP_NODShiLtJ_T0074364.1 MGP_NODShiLtJ_G0029951.1 mouse_genomes_project 5 148977579 149450155 - MGP_NODShiLtJ_P0074364 Wbscr17 protein_coding protein_coding MGP_NODShiLtJ_T0074365.1 MGP_NODShiLtJ_G0029951.1 mouse_genomes_project 5 149082497 149449734 - MGP_NODShiLtJ_P0074365 Wbscr17 protein_coding protein_coding MGP_NODShiLtJ_T0074366.1 MGP_NODShiLtJ_G0029951.1 mouse_genomes_project 5 149207068 149448573 - Wbscr17 protein_coding retained_intron MGP_NODShiLtJ_T0074367.1 MGP_NODShiLtJ_G0029951.1 mouse_genomes_project 5 149275418 149449531 - Wbscr17 protein_coding retained_intron MGP_NODShiLtJ_T0074368.1 MGP_NODShiLtJ_G0029951.1 mouse_genomes_project 5 149448507 149449736 - Wbscr17 protein_coding processed_transcript MGP_NODShiLtJ_T0100630.1 MGP_NODShiLtJ_G0039024.1 mouse_genomes_project 5 112768287 112768418 + Gm24279 snoRNA snoRNA MGP_NODShiLtJ_T0010576.1 MGP_NODShiLtJ_G0008709.1 mouse_genomes_project 5 55973080 55973196 - Mir6417 miRNA miRNA MGP_NODShiLtJ_T0008134.1 MGP_NODShiLtJ_G0006623.1 mouse_genomes_project 5 105188880 105201759 + Gm26582 lincRNA lincRNA MGP_NODShiLtJ_T0100641.1 MGP_NODShiLtJ_G0039035.1 mouse_genomes_project 5 138382652 138382786 + Gm26205 snoRNA snoRNA MGP_NODShiLtJ_T0018065.1 MGP_NODShiLtJ_G0015487.1 mouse_genomes_project 5 171973179 171986676 + processed_transcript retained_intron MGP_NODShiLtJ_T0018066.1 MGP_NODShiLtJ_G0015487.1 mouse_genomes_project 5 171973213 172001384 + processed_transcript lincRNA MGP_NODShiLtJ_T0018067.1 MGP_NODShiLtJ_G0015487.1 mouse_genomes_project 5 171973222 172020211 + processed_transcript lincRNA MGP_NODShiLtJ_T0018068.1 MGP_NODShiLtJ_G0015487.1 mouse_genomes_project 5 172005363 172020004 + processed_transcript lincRNA MGP_NODShiLtJ_T0018069.1 MGP_NODShiLtJ_G0015487.1 mouse_genomes_project 5 172011723 172040501 + processed_transcript lincRNA MGP_NODShiLtJ_T0018070.1 MGP_NODShiLtJ_G0015487.1 mouse_genomes_project 5 172011745 172038901 + processed_transcript lincRNA MGP_NODShiLtJ_T0001565.1 MGP_NODShiLtJ_G0001481.1 mouse_genomes_project 5 58903303 58906004 + TEC TEC MGP_NODShiLtJ_T0099410.1 MGP_NODShiLtJ_G0037804.1 mouse_genomes_project 5 171273511 171273617 + Gm24630 snRNA snRNA MGP_NODShiLtJ_T0098411.1 MGP_NODShiLtJ_G0036816.1 mouse_genomes_project 5 146661216 146662240 - Gm42871 sense_intronic sense_intronic MGP_NODShiLtJ_T0070962.1 MGP_NODShiLtJ_G0029287.1 mouse_genomes_project 5 37538354 37570888 - MGP_NODShiLtJ_P0070962 Sh3tc1 protein_coding protein_coding MGP_NODShiLtJ_T0070963.1 MGP_NODShiLtJ_G0029287.1 mouse_genomes_project 5 37538362 37571166 - MGP_NODShiLtJ_P0070963 Sh3tc1 protein_coding protein_coding MGP_NODShiLtJ_T0070964.1 MGP_NODShiLtJ_G0029287.1 mouse_genomes_project 5 37538363 37565822 - MGP_NODShiLtJ_P0070964 Sh3tc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070965.1 MGP_NODShiLtJ_G0029287.1 mouse_genomes_project 5 37538365 37558129 - MGP_NODShiLtJ_P0070965 Sh3tc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070966.1 MGP_NODShiLtJ_G0029287.1 mouse_genomes_project 5 37538365 37581870 - MGP_NODShiLtJ_P0070966 Sh3tc1 protein_coding protein_coding MGP_NODShiLtJ_T0070967.1 MGP_NODShiLtJ_G0029287.1 mouse_genomes_project 5 37538367 37561116 - Sh3tc1 protein_coding retained_intron MGP_NODShiLtJ_T0070968.1 MGP_NODShiLtJ_G0029287.1 mouse_genomes_project 5 37564945 37570902 - Sh3tc1 protein_coding processed_transcript MGP_NODShiLtJ_T0072157.1 MGP_NODShiLtJ_G0029516.1 mouse_genomes_project 5 102278995 102321373 - MGP_NODShiLtJ_P0072157 Gc protein_coding protein_coding MGP_NODShiLtJ_T0072158.1 MGP_NODShiLtJ_G0029516.1 mouse_genomes_project 5 102284221 102291047 - MGP_NODShiLtJ_P0072158 Gc protein_coding protein_coding MGP_NODShiLtJ_T0073188.1 MGP_NODShiLtJ_G0029740.1 mouse_genomes_project 5 130773289 130782340 + MGP_NODShiLtJ_P0073188 Mvk protein_coding protein_coding MGP_NODShiLtJ_T0073189.1 MGP_NODShiLtJ_G0029740.1 mouse_genomes_project 5 130773306 130789631 + MGP_NODShiLtJ_P0073189 Mvk protein_coding protein_coding MGP_NODShiLtJ_T0073190.1 MGP_NODShiLtJ_G0029740.1 mouse_genomes_project 5 130773314 130789738 + Mvk protein_coding retained_intron MGP_NODShiLtJ_T0073191.1 MGP_NODShiLtJ_G0029740.1 mouse_genomes_project 5 130773323 130784673 + MGP_NODShiLtJ_P0073191 Mvk protein_coding protein_coding MGP_NODShiLtJ_T0073192.1 MGP_NODShiLtJ_G0029740.1 mouse_genomes_project 5 130773323 130782340 + MGP_NODShiLtJ_P0073192 Mvk protein_coding protein_coding MGP_NODShiLtJ_T0073193.1 MGP_NODShiLtJ_G0029740.1 mouse_genomes_project 5 130773326 130789745 + MGP_NODShiLtJ_P0073193 Mvk protein_coding protein_coding MGP_NODShiLtJ_T0073194.1 MGP_NODShiLtJ_G0029740.1 mouse_genomes_project 5 130781613 130789726 + MGP_NODShiLtJ_P0073194 Mvk protein_coding protein_coding MGP_NODShiLtJ_T0075206.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159953205 159995540 - MGP_NODShiLtJ_P0075206 Iqce protein_coding protein_coding MGP_NODShiLtJ_T0075207.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159954883 159957620 - Iqce protein_coding retained_intron MGP_NODShiLtJ_T0075208.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159954883 159995427 - Iqce protein_coding retained_intron MGP_NODShiLtJ_T0075209.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159956658 159995501 - MGP_NODShiLtJ_P0075209 Iqce protein_coding protein_coding MGP_NODShiLtJ_T0075210.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159957407 159974724 - MGP_NODShiLtJ_P0075210 Iqce protein_coding protein_coding MGP_NODShiLtJ_T0075211.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159957536 159960668 - Iqce protein_coding retained_intron MGP_NODShiLtJ_T0075212.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159974234 159981088 - Iqce protein_coding retained_intron MGP_NODShiLtJ_T0075213.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159975024 159995438 - Iqce protein_coding retained_intron MGP_NODShiLtJ_T0075214.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159981084 159995131 - Iqce protein_coding processed_transcript MGP_NODShiLtJ_T0075215.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159981089 159995540 - MGP_NODShiLtJ_P0075215 Iqce protein_coding protein_coding MGP_NODShiLtJ_T0075216.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159983885 159995462 - MGP_NODShiLtJ_P0075216 Iqce protein_coding protein_coding MGP_NODShiLtJ_T0075217.1 MGP_NODShiLtJ_G0030107.1 mouse_genomes_project 5 159984283 159995456 - Iqce protein_coding retained_intron MGP_NODShiLtJ_T0008106.1 MGP_NODShiLtJ_G0006599.1 mouse_genomes_project 5 84744285 84749595 - Gm43100 lincRNA lincRNA MGP_NODShiLtJ_T0008154.1 MGP_NODShiLtJ_G0006639.1 mouse_genomes_project 5 114327365 114336597 + lincRNA lincRNA MGP_NODShiLtJ_T0010584.1 MGP_NODShiLtJ_G0008717.1 mouse_genomes_project 5 84130919 84130993 + Mir7025 miRNA miRNA MGP_NODShiLtJ_T0001429.1 MGP_NODShiLtJ_G0001348.1 mouse_genomes_project 5 15196081 15197262 + TEC TEC MGP_NODShiLtJ_T0071892.1 MGP_NODShiLtJ_G0029446.1 mouse_genomes_project 5 85333877 85356919 - MGP_NODShiLtJ_P0071892 Pdcl2 protein_coding protein_coding MGP_NODShiLtJ_T0071893.1 MGP_NODShiLtJ_G0029446.1 mouse_genomes_project 5 85333889 85356942 - MGP_NODShiLtJ_P0071893 Pdcl2 protein_coding protein_coding MGP_NODShiLtJ_T0014824.1 MGP_NODShiLtJ_G0012932.1 mouse_genomes_project 5 34860106 34861151 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008349.1 MGP_NODShiLtJ_G0006763.1 mouse_genomes_project 5 157057976 157070861 - lincRNA lincRNA MGP_NODShiLtJ_T0070231.1 MGP_NODShiLtJ_G0029170.1 mouse_genomes_project 5 29101326 29113366 + MGP_NODShiLtJ_P0070231 Insig1 protein_coding protein_coding MGP_NODShiLtJ_T0070232.1 MGP_NODShiLtJ_G0029170.1 mouse_genomes_project 5 29104629 29107015 + Insig1 protein_coding retained_intron MGP_NODShiLtJ_T0008190.1 MGP_NODShiLtJ_G0006664.1 mouse_genomes_project 5 122292012 122299888 + Gm43419 lincRNA lincRNA MGP_NODShiLtJ_T0069693.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 1845412 2404196 - MGP_NODShiLtJ_P0069693 Cdk14 protein_coding protein_coding MGP_NODShiLtJ_T0069694.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 1845412 2553157 - MGP_NODShiLtJ_P0069694 Cdk14 protein_coding protein_coding MGP_NODShiLtJ_T0069695.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 1847851 2403438 - MGP_NODShiLtJ_P0069695 Cdk14 protein_coding protein_coding MGP_NODShiLtJ_T0069696.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 1848706 2404293 - MGP_NODShiLtJ_P0069696 Cdk14 protein_coding protein_coding MGP_NODShiLtJ_T0069697.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 1951419 1959658 - Cdk14 protein_coding retained_intron MGP_NODShiLtJ_T0069698.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 1993384 2404110 - Cdk14 protein_coding retained_intron MGP_NODShiLtJ_T0069699.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 2006294 2124879 - Cdk14 protein_coding processed_transcript MGP_NODShiLtJ_T0069700.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 2089293 2553184 - Cdk14 protein_coding retained_intron MGP_NODShiLtJ_T0069701.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 2186255 2553211 - Cdk14 protein_coding retained_intron MGP_NODShiLtJ_T0069702.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 2230463 2553153 - Cdk14 protein_coding retained_intron MGP_NODShiLtJ_T0069703.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 2294323 2306269 - Cdk14 protein_coding processed_transcript MGP_NODShiLtJ_T0069704.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 2354021 2404420 - MGP_NODShiLtJ_P0069704 Cdk14 protein_coding protein_coding MGP_NODShiLtJ_T0069705.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 2354022 2592796 - MGP_NODShiLtJ_P0069705 Cdk14 protein_coding protein_coding MGP_NODShiLtJ_T0069706.1 MGP_NODShiLtJ_G0029073.1 mouse_genomes_project 5 2387425 2404431 - Cdk14 protein_coding processed_transcript MGP_NODShiLtJ_T0001589.1 MGP_NODShiLtJ_G0001504.1 mouse_genomes_project 5 72319684 72321983 + TEC TEC MGP_NODShiLtJ_T0071691.1 MGP_NODShiLtJ_G0029410.1 mouse_genomes_project 5 80022745 80156652 - protein_coding processed_transcript MGP_NODShiLtJ_T0071692.1 MGP_NODShiLtJ_G0029410.1 mouse_genomes_project 5 80022900 80023132 - protein_coding transcribed_processed_pseudogene MGP_NODShiLtJ_T0001442.1 MGP_NODShiLtJ_G0001361.1 mouse_genomes_project 5 25181148 25183250 - TEC TEC MGP_NODShiLtJ_T0001443.1 MGP_NODShiLtJ_G0001361.1 mouse_genomes_project 5 25182714 25183248 - TEC TEC MGP_NODShiLtJ_T0018030.1 MGP_NODShiLtJ_G0015476.1 mouse_genomes_project 5 140380911 140406836 - Gm44574 processed_transcript processed_transcript MGP_NODShiLtJ_T0004768.1 MGP_NODShiLtJ_G0004106.1 mouse_genomes_project 5 140802339 140815403 - Gm15860 antisense antisense MGP_NODShiLtJ_T0004769.1 MGP_NODShiLtJ_G0004106.1 mouse_genomes_project 5 140803883 140815505 - Gm15860 antisense antisense MGP_NODShiLtJ_T0004770.1 MGP_NODShiLtJ_G0004106.1 mouse_genomes_project 5 140804019 140812967 - Gm15860 antisense antisense MGP_NODShiLtJ_T0001712.1 MGP_NODShiLtJ_G0001626.1 mouse_genomes_project 5 123719236 123720613 - TEC TEC MGP_NODShiLtJ_T0001423.1 MGP_NODShiLtJ_G0001342.1 mouse_genomes_project 5 13370443 13373321 + TEC TEC MGP_NODShiLtJ_T0001595.1 MGP_NODShiLtJ_G0001510.1 mouse_genomes_project 5 72897079 72897999 + TEC TEC MGP_NODShiLtJ_T0073092.1 MGP_NODShiLtJ_G0029723.1 mouse_genomes_project 5 130004355 130036898 - MGP_NODShiLtJ_P0073092 Sart3 protein_coding protein_coding MGP_NODShiLtJ_T0073093.1 MGP_NODShiLtJ_G0029723.1 mouse_genomes_project 5 130004357 130036084 - MGP_NODShiLtJ_P0073093 Sart3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073094.1 MGP_NODShiLtJ_G0029723.1 mouse_genomes_project 5 130006587 130007505 - Sart3 protein_coding retained_intron MGP_NODShiLtJ_T0073095.1 MGP_NODShiLtJ_G0029723.1 mouse_genomes_project 5 130007679 130017352 - Sart3 protein_coding processed_transcript MGP_NODShiLtJ_T0073096.1 MGP_NODShiLtJ_G0029723.1 mouse_genomes_project 5 130016143 130016667 - Sart3 protein_coding processed_transcript MGP_NODShiLtJ_T0073097.1 MGP_NODShiLtJ_G0029723.1 mouse_genomes_project 5 130016889 130020124 - Sart3 protein_coding retained_intron MGP_NODShiLtJ_T0073098.1 MGP_NODShiLtJ_G0029723.1 mouse_genomes_project 5 130017316 130023721 - Sart3 protein_coding processed_transcript MGP_NODShiLtJ_T0001495.1 MGP_NODShiLtJ_G0001411.1 mouse_genomes_project 5 46632798 46633345 + TEC TEC MGP_NODShiLtJ_T0072206.1 MGP_NODShiLtJ_G0029528.1 mouse_genomes_project 5 103786845 103788389 + MGP_NODShiLtJ_P0072206 Ppbp protein_coding protein_coding MGP_NODShiLtJ_T0015041.1 MGP_NODShiLtJ_G0013149.1 mouse_genomes_project 5 152209732 152210576 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008275.1 MGP_NODShiLtJ_G0006718.1 mouse_genomes_project 5 136845922 136847756 + Gm43269 lincRNA lincRNA MGP_NODShiLtJ_T0014938.1 MGP_NODShiLtJ_G0013046.1 mouse_genomes_project 5 99567597 99569149 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001464.1 MGP_NODShiLtJ_G0001380.1 mouse_genomes_project 5 33842353 33844819 + TEC TEC MGP_NODShiLtJ_T0004674.1 MGP_NODShiLtJ_G0004042.1 mouse_genomes_project 5 103501627 103518409 - Gm43449 antisense antisense MGP_NODShiLtJ_T0072524.1 MGP_NODShiLtJ_G0029597.1 mouse_genomes_project 5 116366470 116427765 + MGP_NODShiLtJ_P0072524 Cds1 protein_coding protein_coding MGP_NODShiLtJ_T0072525.1 MGP_NODShiLtJ_G0029597.1 mouse_genomes_project 5 116410454 116425354 + Cds1 protein_coding retained_intron MGP_NODShiLtJ_T0069753.1 MGP_NODShiLtJ_G0029080.1 mouse_genomes_project 5 4069264 4819039 - MGP_NODShiLtJ_P0069753 Zfp804b protein_coding protein_coding MGP_NODShiLtJ_T0069754.1 MGP_NODShiLtJ_G0029080.1 mouse_genomes_project 5 4069284 4217680 - MGP_NODShiLtJ_P0069754 Zfp804b protein_coding protein_coding MGP_NODShiLtJ_T0074629.1 MGP_NODShiLtJ_G0029993.1 mouse_genomes_project 5 154300181 154341180 + Srrm3 protein_coding retained_intron MGP_NODShiLtJ_T0074630.1 MGP_NODShiLtJ_G0029993.1 mouse_genomes_project 5 154300188 154351426 + MGP_NODShiLtJ_P0074630 Srrm3 protein_coding protein_coding MGP_NODShiLtJ_T0074631.1 MGP_NODShiLtJ_G0029993.1 mouse_genomes_project 5 154312799 154375849 + MGP_NODShiLtJ_P0074631 Srrm3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074632.1 MGP_NODShiLtJ_G0029993.1 mouse_genomes_project 5 154312799 154377512 + MGP_NODShiLtJ_P0074632 Srrm3 protein_coding protein_coding MGP_NODShiLtJ_T0074633.1 MGP_NODShiLtJ_G0029993.1 mouse_genomes_project 5 154353624 154357724 + Srrm3 protein_coding retained_intron MGP_NODShiLtJ_T0074634.1 MGP_NODShiLtJ_G0029993.1 mouse_genomes_project 5 154367911 154369493 + Srrm3 protein_coding retained_intron MGP_NODShiLtJ_T0072566.1 MGP_NODShiLtJ_G0029604.1 mouse_genomes_project 5 118398500 118547757 + Aff1 protein_coding retained_intron MGP_NODShiLtJ_T0072567.1 MGP_NODShiLtJ_G0029604.1 mouse_genomes_project 5 118482287 118589824 + MGP_NODShiLtJ_P0072567 Aff1 protein_coding protein_coding MGP_NODShiLtJ_T0072568.1 MGP_NODShiLtJ_G0029604.1 mouse_genomes_project 5 118482688 118575122 + MGP_NODShiLtJ_P0072568 Aff1 protein_coding protein_coding MGP_NODShiLtJ_T0072569.1 MGP_NODShiLtJ_G0029604.1 mouse_genomes_project 5 118482697 118589824 + MGP_NODShiLtJ_P0072569 Aff1 protein_coding protein_coding MGP_NODShiLtJ_T0072570.1 MGP_NODShiLtJ_G0029604.1 mouse_genomes_project 5 118513566 118542924 + Aff1 protein_coding retained_intron MGP_NODShiLtJ_T0001711.1 MGP_NODShiLtJ_G0001625.1 mouse_genomes_project 5 123163895 123165055 + TEC TEC MGP_NODShiLtJ_T0001655.1 MGP_NODShiLtJ_G0001569.1 mouse_genomes_project 5 83144077 83144546 - TEC TEC MGP_NODShiLtJ_T0010626.1 MGP_NODShiLtJ_G0008759.1 mouse_genomes_project 5 157015360 157015448 - Mir93 miRNA miRNA MGP_NODShiLtJ_T0001648.1 MGP_NODShiLtJ_G0001562.1 mouse_genomes_project 5 82096771 82097290 - TEC TEC MGP_NODShiLtJ_T0014731.1 MGP_NODShiLtJ_G0012839.1 mouse_genomes_project 5 5473866 5474158 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015012.1 MGP_NODShiLtJ_G0013120.1 mouse_genomes_project 5 130031568 130031772 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073737.1 MGP_NODShiLtJ_G0029844.1 mouse_genomes_project 5 139550178 139580865 + MGP_NODShiLtJ_P0073737 Hvcn1 protein_coding protein_coding MGP_NODShiLtJ_T0073738.1 MGP_NODShiLtJ_G0029844.1 mouse_genomes_project 5 139553108 139592535 + MGP_NODShiLtJ_P0073738 Hvcn1 protein_coding protein_coding MGP_NODShiLtJ_T0073739.1 MGP_NODShiLtJ_G0029844.1 mouse_genomes_project 5 139553288 139587632 + MGP_NODShiLtJ_P0073739 Hvcn1 protein_coding protein_coding MGP_NODShiLtJ_T0073740.1 MGP_NODShiLtJ_G0029844.1 mouse_genomes_project 5 139553499 139585104 + MGP_NODShiLtJ_P0073740 Hvcn1 protein_coding protein_coding MGP_NODShiLtJ_T0073741.1 MGP_NODShiLtJ_G0029844.1 mouse_genomes_project 5 139553520 139592535 + MGP_NODShiLtJ_P0073741 Hvcn1 protein_coding protein_coding MGP_NODShiLtJ_T0099385.1 MGP_NODShiLtJ_G0037779.1 mouse_genomes_project 5 126674722 126674829 - Gm22716 snRNA snRNA MGP_NODShiLtJ_T0072050.1 MGP_NODShiLtJ_G0029475.1 mouse_genomes_project 5 98923733 98945159 - MGP_NODShiLtJ_P0072050 protein_coding protein_coding MGP_NODShiLtJ_T0010567.1 MGP_NODShiLtJ_G0008700.1 mouse_genomes_project 5 32983565 32983675 - Mir3473e miRNA miRNA MGP_NODShiLtJ_T0014971.1 MGP_NODShiLtJ_G0013079.1 mouse_genomes_project 5 115097321 115097674 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014830.1 MGP_NODShiLtJ_G0012938.1 mouse_genomes_project 5 36059617 36060076 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072988.1 MGP_NODShiLtJ_G0029699.1 mouse_genomes_project 5 127354592 127411094 + MGP_NODShiLtJ_P0072988 Pitpnb protein_coding protein_coding MGP_NODShiLtJ_T0072989.1 MGP_NODShiLtJ_G0029699.1 mouse_genomes_project 5 127354636 127411094 + MGP_NODShiLtJ_P0072989 Pitpnb protein_coding protein_coding MGP_NODShiLtJ_T0072990.1 MGP_NODShiLtJ_G0029699.1 mouse_genomes_project 5 127354643 127411100 + MGP_NODShiLtJ_P0072990 Pitpnb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072991.1 MGP_NODShiLtJ_G0029699.1 mouse_genomes_project 5 127370366 127405864 + Pitpnb protein_coding processed_transcript MGP_NODShiLtJ_T0072992.1 MGP_NODShiLtJ_G0029699.1 mouse_genomes_project 5 127402021 127406454 + Pitpnb protein_coding retained_intron MGP_NODShiLtJ_T0014831.1 MGP_NODShiLtJ_G0012939.1 mouse_genomes_project 5 36247564 36248173 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001460.1 MGP_NODShiLtJ_G0001377.1 mouse_genomes_project 5 33026996 33027228 + TEC TEC MGP_NODShiLtJ_T0008090.1 MGP_NODShiLtJ_G0006587.1 mouse_genomes_project 5 81370007 81372713 + 4933408A14Rik lincRNA lincRNA MGP_NODShiLtJ_T0098048.1 MGP_NODShiLtJ_G0036460.1 mouse_genomes_project 5 85013584 85013707 - Gm24738 rRNA rRNA MGP_NODShiLtJ_T0014757.1 MGP_NODShiLtJ_G0012865.1 mouse_genomes_project 5 20616345 20616685 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099357.1 MGP_NODShiLtJ_G0037751.1 mouse_genomes_project 5 77814889 77815015 - Gm26044 snRNA snRNA MGP_NODShiLtJ_T0015066.1 MGP_NODShiLtJ_G0013174.1 mouse_genomes_project 5 161681307 161682271 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072853.1 MGP_NODShiLtJ_G0029677.1 mouse_genomes_project 5 125964973 125982763 - MGP_NODShiLtJ_P0072853 4930522L14Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0074142.1 MGP_NODShiLtJ_G0029906.1 mouse_genomes_project 5 142418922 142447370 + MGP_NODShiLtJ_P0074142 Zfp664 protein_coding protein_coding MGP_NODShiLtJ_T0074143.1 MGP_NODShiLtJ_G0029906.1 mouse_genomes_project 5 142418995 142469940 + Zfp664 protein_coding processed_transcript MGP_NODShiLtJ_T0074144.1 MGP_NODShiLtJ_G0029906.1 mouse_genomes_project 5 142419270 142444047 + Zfp664 protein_coding processed_transcript MGP_NODShiLtJ_T0074145.1 MGP_NODShiLtJ_G0029906.1 mouse_genomes_project 5 142431540 142433685 + Zfp664 protein_coding processed_transcript MGP_NODShiLtJ_T0074146.1 MGP_NODShiLtJ_G0029906.1 mouse_genomes_project 5 142433357 142444217 + Zfp664 protein_coding processed_transcript MGP_NODShiLtJ_T0074147.1 MGP_NODShiLtJ_G0029906.1 mouse_genomes_project 5 142443306 142447370 + Zfp664 protein_coding processed_transcript MGP_NODShiLtJ_T0071495.1 MGP_NODShiLtJ_G0029381.1 mouse_genomes_project 5 72811143 72834381 - MGP_NODShiLtJ_P0071495 Ugdh protein_coding protein_coding MGP_NODShiLtJ_T0071496.1 MGP_NODShiLtJ_G0029381.1 mouse_genomes_project 5 72811146 72824005 - Ugdh protein_coding retained_intron MGP_NODShiLtJ_T0071497.1 MGP_NODShiLtJ_G0029381.1 mouse_genomes_project 5 72816066 72821351 - Ugdh protein_coding retained_intron MGP_NODShiLtJ_T0071498.1 MGP_NODShiLtJ_G0029381.1 mouse_genomes_project 5 72821896 72826830 - MGP_NODShiLtJ_P0071498 Ugdh protein_coding protein_coding MGP_NODShiLtJ_T0004735.1 MGP_NODShiLtJ_G0004082.1 mouse_genomes_project 5 132700125 132705698 + C330018A13Rik antisense antisense MGP_NODShiLtJ_T0074474.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152938119 152953513 - MGP_NODShiLtJ_P0074474 Lat2 protein_coding protein_coding MGP_NODShiLtJ_T0074475.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152938200 152953478 - MGP_NODShiLtJ_P0074475 Lat2 protein_coding protein_coding MGP_NODShiLtJ_T0074476.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152938335 152947105 - MGP_NODShiLtJ_P0074476 Lat2 protein_coding protein_coding MGP_NODShiLtJ_T0074477.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152938528 152944459 - MGP_NODShiLtJ_P0074477 Lat2 protein_coding protein_coding MGP_NODShiLtJ_T0074478.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152938666 152943904 - Lat2 protein_coding processed_transcript MGP_NODShiLtJ_T0074479.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152938895 152953494 - MGP_NODShiLtJ_P0074479 Lat2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074480.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152938908 152942016 - Lat2 protein_coding retained_intron MGP_NODShiLtJ_T0074481.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152942864 152953473 - Lat2 protein_coding processed_transcript MGP_NODShiLtJ_T0074482.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152944033 152953454 - MGP_NODShiLtJ_P0074482 Lat2 protein_coding protein_coding MGP_NODShiLtJ_T0074483.1 MGP_NODShiLtJ_G0029962.1 mouse_genomes_project 5 152944138 152946262 - Lat2 protein_coding retained_intron MGP_NODShiLtJ_T0001525.1 MGP_NODShiLtJ_G0001441.1 mouse_genomes_project 5 52010111 52013551 - TEC TEC MGP_NODShiLtJ_T0098041.1 MGP_NODShiLtJ_G0036453.1 mouse_genomes_project 5 22954326 22954439 - n-R5s170 rRNA rRNA MGP_NODShiLtJ_T0014791.1 MGP_NODShiLtJ_G0012899.1 mouse_genomes_project 5 26253457 26254061 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010586.1 MGP_NODShiLtJ_G0008719.1 mouse_genomes_project 5 86389433 86389515 + Mir5098 miRNA miRNA MGP_NODShiLtJ_T0073869.1 MGP_NODShiLtJ_G0029863.1 mouse_genomes_project 5 140489548 140542376 + Tmem120b protein_coding processed_transcript MGP_NODShiLtJ_T0073870.1 MGP_NODShiLtJ_G0029863.1 mouse_genomes_project 5 140497158 140543443 + MGP_NODShiLtJ_P0073870 Tmem120b protein_coding protein_coding MGP_NODShiLtJ_T0073871.1 MGP_NODShiLtJ_G0029863.1 mouse_genomes_project 5 140497208 140540820 + MGP_NODShiLtJ_P0073871 Tmem120b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073872.1 MGP_NODShiLtJ_G0029863.1 mouse_genomes_project 5 140497209 140542703 + MGP_NODShiLtJ_P0073872 Tmem120b protein_coding protein_coding MGP_NODShiLtJ_T0073873.1 MGP_NODShiLtJ_G0029863.1 mouse_genomes_project 5 140497224 140540838 + MGP_NODShiLtJ_P0073873 Tmem120b protein_coding protein_coding MGP_NODShiLtJ_T0073874.1 MGP_NODShiLtJ_G0029863.1 mouse_genomes_project 5 140497234 140527921 + Tmem120b protein_coding retained_intron MGP_NODShiLtJ_T0073875.1 MGP_NODShiLtJ_G0029863.1 mouse_genomes_project 5 140497253 140523716 + Tmem120b protein_coding retained_intron MGP_NODShiLtJ_T0073876.1 MGP_NODShiLtJ_G0029863.1 mouse_genomes_project 5 140523248 140541512 + Tmem120b protein_coding retained_intron MGP_NODShiLtJ_T0071700.1 MGP_NODShiLtJ_G0029413.1 mouse_genomes_project 5 80841785 80854437 - MGP_NODShiLtJ_P0071700 Commd8 protein_coding protein_coding MGP_NODShiLtJ_T0071701.1 MGP_NODShiLtJ_G0029413.1 mouse_genomes_project 5 80842395 80854412 - MGP_NODShiLtJ_P0071701 Commd8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071702.1 MGP_NODShiLtJ_G0029413.1 mouse_genomes_project 5 80844221 80846349 - Commd8 protein_coding retained_intron MGP_NODShiLtJ_T0071703.1 MGP_NODShiLtJ_G0029413.1 mouse_genomes_project 5 80845086 80851968 - Commd8 protein_coding processed_transcript MGP_NODShiLtJ_T0071704.1 MGP_NODShiLtJ_G0029413.1 mouse_genomes_project 5 80846172 80854404 - MGP_NODShiLtJ_P0071704 Commd8 protein_coding protein_coding MGP_NODShiLtJ_T0070167.1 MGP_NODShiLtJ_G0029155.1 mouse_genomes_project 5 25442228 25469333 + MGP_NODShiLtJ_P0070167 Nub1 protein_coding protein_coding MGP_NODShiLtJ_T0070168.1 MGP_NODShiLtJ_G0029155.1 mouse_genomes_project 5 25442520 25469335 + MGP_NODShiLtJ_P0070168 Nub1 protein_coding protein_coding MGP_NODShiLtJ_T0070169.1 MGP_NODShiLtJ_G0029155.1 mouse_genomes_project 5 25442683 25469333 + Nub1 protein_coding retained_intron MGP_NODShiLtJ_T0072380.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110796124 110823457 + MGP_NODShiLtJ_P0072380 Anxa3 protein_coding protein_coding MGP_NODShiLtJ_T0072381.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110796170 110854051 + MGP_NODShiLtJ_P0072381 Anxa3 protein_coding protein_coding MGP_NODShiLtJ_T0072382.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110796226 110832490 + MGP_NODShiLtJ_P0072382 Anxa3 protein_coding protein_coding MGP_NODShiLtJ_T0072383.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110796285 110833431 + MGP_NODShiLtJ_P0072383 Anxa3 protein_coding protein_coding MGP_NODShiLtJ_T0072384.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110817097 110842329 + Anxa3 protein_coding retained_intron MGP_NODShiLtJ_T0072385.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110823348 110846421 + Anxa3 protein_coding retained_intron MGP_NODShiLtJ_T0072386.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110835451 110837968 + Anxa3 protein_coding retained_intron MGP_NODShiLtJ_T0072387.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110837562 110853767 + Anxa3 protein_coding retained_intron MGP_NODShiLtJ_T0072388.1 MGP_NODShiLtJ_G0029567.1 mouse_genomes_project 5 110850080 110853945 + MGP_NODShiLtJ_P0072388 Anxa3 protein_coding protein_coding MGP_NODShiLtJ_T0004771.1 MGP_NODShiLtJ_G0004107.1 mouse_genomes_project 5 140874339 140878655 - Gm15747 antisense antisense MGP_NODShiLtJ_T0004772.1 MGP_NODShiLtJ_G0004107.1 mouse_genomes_project 5 140874350 140875756 - Gm15747 antisense antisense MGP_NODShiLtJ_T0011499.1 MGP_NODShiLtJ_G0009632.1 mouse_genomes_project 5 128330648 128330798 - Gm27627 misc_RNA misc_RNA MGP_NODShiLtJ_T0070901.1 MGP_NODShiLtJ_G0029276.1 mouse_genomes_project 5 36702344 36713210 + Msantd1 protein_coding processed_transcript MGP_NODShiLtJ_T0070902.1 MGP_NODShiLtJ_G0029276.1 mouse_genomes_project 5 36710481 36718962 + MGP_NODShiLtJ_P0070902 Msantd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070903.1 MGP_NODShiLtJ_G0029276.1 mouse_genomes_project 5 36711308 36719237 + MGP_NODShiLtJ_P0070903 Msantd1 protein_coding protein_coding MGP_NODShiLtJ_T0070904.1 MGP_NODShiLtJ_G0029276.1 mouse_genomes_project 5 36712932 36719088 + MGP_NODShiLtJ_P0070904 Msantd1 protein_coding protein_coding MGP_NODShiLtJ_T0001639.1 MGP_NODShiLtJ_G0001554.1 mouse_genomes_project 5 77248323 77250270 - TEC TEC MGP_NODShiLtJ_T0101161.1 MGP_NODShiLtJ_G0039488.1 mouse_genomes_project 5 100470166 100473057 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101162.1 MGP_NODShiLtJ_G0039488.1 mouse_genomes_project 5 100470325 100471450 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0001860.1 MGP_NODShiLtJ_G0001772.1 mouse_genomes_project 5 163755045 163756841 + TEC TEC MGP_NODShiLtJ_T0004741.1 MGP_NODShiLtJ_G0004087.1 mouse_genomes_project 5 134025632 134026380 - Gm10399 antisense antisense MGP_NODShiLtJ_T0004742.1 MGP_NODShiLtJ_G0004087.1 mouse_genomes_project 5 134025880 134026378 - Gm10399 antisense antisense MGP_NODShiLtJ_T0100619.1 MGP_NODShiLtJ_G0039013.1 mouse_genomes_project 5 76300001 76300128 - Gm23605 snoRNA snoRNA MGP_NODShiLtJ_T0008074.1 MGP_NODShiLtJ_G0006575.1 mouse_genomes_project 5 71303158 71308387 + 5830416I19Rik lincRNA lincRNA MGP_NODShiLtJ_T0072596.1 MGP_NODShiLtJ_G0029615.1 mouse_genomes_project 5 119219156 119225433 + MGP_NODShiLtJ_P0072596 Spp1 protein_coding protein_coding MGP_NODShiLtJ_T0072597.1 MGP_NODShiLtJ_G0029615.1 mouse_genomes_project 5 119219156 119225431 + MGP_NODShiLtJ_P0072597 Spp1 protein_coding protein_coding MGP_NODShiLtJ_T0072598.1 MGP_NODShiLtJ_G0029615.1 mouse_genomes_project 5 119219159 119225430 + MGP_NODShiLtJ_P0072598 Spp1 protein_coding protein_coding MGP_NODShiLtJ_T0072599.1 MGP_NODShiLtJ_G0029615.1 mouse_genomes_project 5 119219177 119223925 + MGP_NODShiLtJ_P0072599 Spp1 protein_coding protein_coding MGP_NODShiLtJ_T0072600.1 MGP_NODShiLtJ_G0029615.1 mouse_genomes_project 5 119219180 119223887 + MGP_NODShiLtJ_P0072600 Spp1 protein_coding protein_coding MGP_NODShiLtJ_T0072601.1 MGP_NODShiLtJ_G0029615.1 mouse_genomes_project 5 119219196 119221749 + MGP_NODShiLtJ_P0072601 Spp1 protein_coding protein_coding MGP_NODShiLtJ_T0072602.1 MGP_NODShiLtJ_G0029615.1 mouse_genomes_project 5 119220230 119225426 + MGP_NODShiLtJ_P0072602 Spp1 protein_coding protein_coding MGP_NODShiLtJ_T0071034.1 MGP_NODShiLtJ_G0029299.1 mouse_genomes_project 5 38761994 38854083 + MGP_NODShiLtJ_P0071034 Ppp2r2c protein_coding protein_coding MGP_NODShiLtJ_T0071035.1 MGP_NODShiLtJ_G0029299.1 mouse_genomes_project 5 38762144 38828781 + MGP_NODShiLtJ_P0071035 Ppp2r2c protein_coding protein_coding MGP_NODShiLtJ_T0071036.1 MGP_NODShiLtJ_G0029299.1 mouse_genomes_project 5 38836810 38837568 + Ppp2r2c protein_coding processed_transcript MGP_NODShiLtJ_T0071254.1 MGP_NODShiLtJ_G0029339.1 mouse_genomes_project 5 48483041 48531419 + MGP_NODShiLtJ_P0071254 Ncapg protein_coding protein_coding MGP_NODShiLtJ_T0071255.1 MGP_NODShiLtJ_G0029339.1 mouse_genomes_project 5 48490003 48530998 + Ncapg protein_coding retained_intron MGP_NODShiLtJ_T0071256.1 MGP_NODShiLtJ_G0029339.1 mouse_genomes_project 5 48491854 48495228 + Ncapg protein_coding retained_intron MGP_NODShiLtJ_T0071257.1 MGP_NODShiLtJ_G0029339.1 mouse_genomes_project 5 48491905 48530944 + Ncapg protein_coding retained_intron MGP_NODShiLtJ_T0071258.1 MGP_NODShiLtJ_G0029339.1 mouse_genomes_project 5 48520918 48527217 + Ncapg protein_coding retained_intron MGP_NODShiLtJ_T0008157.1 MGP_NODShiLtJ_G0006642.1 mouse_genomes_project 5 114645845 114654754 + 2310034O05Rik lincRNA lincRNA MGP_NODShiLtJ_T0008158.1 MGP_NODShiLtJ_G0006642.1 mouse_genomes_project 5 114645861 114653446 + 2310034O05Rik lincRNA lincRNA MGP_NODShiLtJ_T0099408.1 MGP_NODShiLtJ_G0037802.1 mouse_genomes_project 5 171088963 171089104 - Gm25284 snRNA snRNA MGP_NODShiLtJ_T0004802.1 MGP_NODShiLtJ_G0004129.1 mouse_genomes_project 5 154342274 154344162 - Srrm3os antisense antisense MGP_NODShiLtJ_T0072802.1 MGP_NODShiLtJ_G0029661.1 mouse_genomes_project 5 124054090 124074397 + MGP_NODShiLtJ_P0072802 Tmem175 protein_coding protein_coding MGP_NODShiLtJ_T0072803.1 MGP_NODShiLtJ_G0029661.1 mouse_genomes_project 5 124054152 124079146 + MGP_NODShiLtJ_P0072803 Tmem175 protein_coding protein_coding MGP_NODShiLtJ_T0072804.1 MGP_NODShiLtJ_G0029661.1 mouse_genomes_project 5 124054322 124077626 + MGP_NODShiLtJ_P0072804 Tmem175 protein_coding protein_coding MGP_NODShiLtJ_T0072805.1 MGP_NODShiLtJ_G0029661.1 mouse_genomes_project 5 124054329 124077034 + MGP_NODShiLtJ_P0072805 Tmem175 protein_coding protein_coding MGP_NODShiLtJ_T0072806.1 MGP_NODShiLtJ_G0029661.1 mouse_genomes_project 5 124067140 124075470 + MGP_NODShiLtJ_P0072806 Tmem175 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072807.1 MGP_NODShiLtJ_G0029661.1 mouse_genomes_project 5 124072049 124073565 + Tmem175 protein_coding retained_intron MGP_NODShiLtJ_T0072808.1 MGP_NODShiLtJ_G0029661.1 mouse_genomes_project 5 124074691 124075483 + Tmem175 protein_coding processed_transcript MGP_NODShiLtJ_T0101959.1 MGP_NODShiLtJ_G0040127.1 mouse_genomes_project 5 114657144 114833779 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101448.1 MGP_NODShiLtJ_G0039627.1 mouse_genomes_project 5 105091550 105096974 + unitary_pseudogene retained_intron MGP_NODShiLtJ_T0101449.1 MGP_NODShiLtJ_G0039627.1 mouse_genomes_project 5 105092051 105099973 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101450.1 MGP_NODShiLtJ_G0039627.1 mouse_genomes_project 5 105092065 105100892 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101451.1 MGP_NODShiLtJ_G0039627.1 mouse_genomes_project 5 105092494 105102373 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0008371.1 MGP_NODShiLtJ_G0006782.1 mouse_genomes_project 5 167934331 167937989 + Gm43156 lincRNA lincRNA MGP_NODShiLtJ_T0004767.1 MGP_NODShiLtJ_G0004105.1 mouse_genomes_project 5 140755189 140772811 - Gm15857 antisense antisense MGP_NODShiLtJ_T0099358.1 MGP_NODShiLtJ_G0037752.1 mouse_genomes_project 5 78389210 78389272 - Gm23067 snRNA snRNA MGP_NODShiLtJ_T0075316.1 MGP_NODShiLtJ_G0030129.1 mouse_genomes_project 5 162751243 162773065 - MGP_NODShiLtJ_P0075316 Zfp316 protein_coding protein_coding MGP_NODShiLtJ_T0075317.1 MGP_NODShiLtJ_G0030129.1 mouse_genomes_project 5 162751835 162757747 - Zfp316 protein_coding retained_intron MGP_NODShiLtJ_T0075318.1 MGP_NODShiLtJ_G0030129.1 mouse_genomes_project 5 162754755 162766527 - MGP_NODShiLtJ_P0075318 Zfp316 protein_coding protein_coding MGP_NODShiLtJ_T0015032.1 MGP_NODShiLtJ_G0013140.1 mouse_genomes_project 5 139794025 139794345 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004702.1 MGP_NODShiLtJ_G0004057.1 mouse_genomes_project 5 118212655 118232865 - Gm42620 antisense antisense MGP_NODShiLtJ_T0075424.1 MGP_NODShiLtJ_G0030154.1 mouse_genomes_project 5 164338706 164367425 - MGP_NODShiLtJ_P0075424 Tmem130 protein_coding protein_coding MGP_NODShiLtJ_T0075425.1 MGP_NODShiLtJ_G0030154.1 mouse_genomes_project 5 164356753 164367594 - Tmem130 protein_coding processed_transcript MGP_NODShiLtJ_T0071940.1 MGP_NODShiLtJ_G0029453.1 mouse_genomes_project 5 86029937 86048128 + MGP_NODShiLtJ_P0071940 Paics protein_coding protein_coding MGP_NODShiLtJ_T0071941.1 MGP_NODShiLtJ_G0029453.1 mouse_genomes_project 5 86029978 86048132 + MGP_NODShiLtJ_P0071941 Paics protein_coding protein_coding MGP_NODShiLtJ_T0071942.1 MGP_NODShiLtJ_G0029453.1 mouse_genomes_project 5 86029998 86047936 + MGP_NODShiLtJ_P0071942 Paics protein_coding protein_coding MGP_NODShiLtJ_T0071943.1 MGP_NODShiLtJ_G0029453.1 mouse_genomes_project 5 86030012 86038521 + MGP_NODShiLtJ_P0071943 Paics protein_coding protein_coding MGP_NODShiLtJ_T0071944.1 MGP_NODShiLtJ_G0029453.1 mouse_genomes_project 5 86030407 86041650 + MGP_NODShiLtJ_P0071944 Paics protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071945.1 MGP_NODShiLtJ_G0029453.1 mouse_genomes_project 5 86040646 86042141 + Paics protein_coding retained_intron MGP_NODShiLtJ_T0071946.1 MGP_NODShiLtJ_G0029453.1 mouse_genomes_project 5 86046779 86047464 + Paics protein_coding retained_intron MGP_NODShiLtJ_T0014723.1 MGP_NODShiLtJ_G0012831.1 mouse_genomes_project 5 886603 888369 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008269.1 MGP_NODShiLtJ_G0006714.1 mouse_genomes_project 5 136550171 136565252 + Gm16064 lincRNA lincRNA MGP_NODShiLtJ_T0075136.1 MGP_NODShiLtJ_G0030088.1 mouse_genomes_project 5 158562912 158567562 + MGP_NODShiLtJ_P0075136 Gper1 protein_coding protein_coding MGP_NODShiLtJ_T0075137.1 MGP_NODShiLtJ_G0030088.1 mouse_genomes_project 5 158563041 158565651 + Gper1 protein_coding processed_transcript MGP_NODShiLtJ_T0074957.1 MGP_NODShiLtJ_G0030054.1 mouse_genomes_project 5 156838139 156859290 + MGP_NODShiLtJ_P0074957 protein_coding protein_coding MGP_NODShiLtJ_T0101956.1 MGP_NODShiLtJ_G0040124.1 mouse_genomes_project 5 99788165 99794026 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0073132.1 MGP_NODShiLtJ_G0029730.1 mouse_genomes_project 5 130325065 130397103 - MGP_NODShiLtJ_P0073132 Svop protein_coding protein_coding MGP_NODShiLtJ_T0073133.1 MGP_NODShiLtJ_G0029730.1 mouse_genomes_project 5 130326280 130366344 - Svop protein_coding processed_transcript MGP_NODShiLtJ_T0073134.1 MGP_NODShiLtJ_G0029730.1 mouse_genomes_project 5 130333182 130342761 - Svop protein_coding retained_intron MGP_NODShiLtJ_T0073135.1 MGP_NODShiLtJ_G0029730.1 mouse_genomes_project 5 130353640 130396913 - Svop protein_coding retained_intron MGP_NODShiLtJ_T0073136.1 MGP_NODShiLtJ_G0029730.1 mouse_genomes_project 5 130354407 130396900 - MGP_NODShiLtJ_P0073136 Svop protein_coding protein_coding MGP_NODShiLtJ_T0073043.1 MGP_NODShiLtJ_G0029713.1 mouse_genomes_project 5 129094506 129206185 - MGP_NODShiLtJ_P0073043 Adrbk2 protein_coding protein_coding MGP_NODShiLtJ_T0073044.1 MGP_NODShiLtJ_G0029713.1 mouse_genomes_project 5 129096622 129206185 - MGP_NODShiLtJ_P0073044 Adrbk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073045.1 MGP_NODShiLtJ_G0029713.1 mouse_genomes_project 5 129100126 129108391 - Adrbk2 protein_coding retained_intron MGP_NODShiLtJ_T0073046.1 MGP_NODShiLtJ_G0029713.1 mouse_genomes_project 5 129101761 129206462 - MGP_NODShiLtJ_P0073046 Adrbk2 protein_coding protein_coding MGP_NODShiLtJ_T0073047.1 MGP_NODShiLtJ_G0029713.1 mouse_genomes_project 5 129104078 129109823 - Adrbk2 protein_coding retained_intron MGP_NODShiLtJ_T0073048.1 MGP_NODShiLtJ_G0029713.1 mouse_genomes_project 5 129145620 129206174 - MGP_NODShiLtJ_P0073048 Adrbk2 protein_coding protein_coding MGP_NODShiLtJ_T0014987.1 MGP_NODShiLtJ_G0013095.1 mouse_genomes_project 5 121957892 121958540 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001677.1 MGP_NODShiLtJ_G0001591.1 mouse_genomes_project 5 106345837 106346430 - TEC TEC MGP_NODShiLtJ_T0014808.1 MGP_NODShiLtJ_G0012916.1 mouse_genomes_project 5 30945569 30946124 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004709.1 MGP_NODShiLtJ_G0004062.1 mouse_genomes_project 5 122910196 122914099 - A930041C12Rik antisense antisense MGP_NODShiLtJ_T0008383.1 MGP_NODShiLtJ_G0006792.1 mouse_genomes_project 5 169365765 169371572 + Gm15408 lincRNA lincRNA MGP_NODShiLtJ_T0070633.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33605202 33705882 + Plb1 protein_coding retained_intron MGP_NODShiLtJ_T0070634.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33605204 33608086 + Plb1 protein_coding retained_intron MGP_NODShiLtJ_T0070635.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33605204 33622615 + Plb1 protein_coding processed_transcript MGP_NODShiLtJ_T0070636.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33605208 33741722 + MGP_NODShiLtJ_P0070636 Plb1 protein_coding protein_coding MGP_NODShiLtJ_T0070637.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33605242 33666808 + Plb1 protein_coding retained_intron MGP_NODShiLtJ_T0070638.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33611557 33696754 + MGP_NODShiLtJ_P0070638 Plb1 protein_coding protein_coding MGP_NODShiLtJ_T0070639.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33619824 33741724 + MGP_NODShiLtJ_P0070639 Plb1 protein_coding protein_coding MGP_NODShiLtJ_T0070640.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33729969 33743888 + Plb1 protein_coding processed_transcript MGP_NODShiLtJ_T0070641.1 MGP_NODShiLtJ_G0029236.1 mouse_genomes_project 5 33731094 33741717 + Plb1 protein_coding processed_transcript MGP_NODShiLtJ_T0001802.1 MGP_NODShiLtJ_G0001715.1 mouse_genomes_project 5 148154943 148155441 + TEC TEC MGP_NODShiLtJ_T0014948.1 MGP_NODShiLtJ_G0013056.1 mouse_genomes_project 5 101654334 101655724 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072040.1 MGP_NODShiLtJ_G0029471.1 mouse_genomes_project 5 98488057 98519721 - MGP_NODShiLtJ_P0072040 Tmprss11d protein_coding protein_coding MGP_NODShiLtJ_T0072041.1 MGP_NODShiLtJ_G0029471.1 mouse_genomes_project 5 98488057 98565683 - MGP_NODShiLtJ_P0072041 Tmprss11d protein_coding protein_coding MGP_NODShiLtJ_T0073600.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138570381 138571788 - Trafd1 protein_coding retained_intron MGP_NODShiLtJ_T0073601.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138570381 138577405 - MGP_NODShiLtJ_P0073601 Trafd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073602.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138570381 138584741 - MGP_NODShiLtJ_P0073602 Trafd1 protein_coding protein_coding MGP_NODShiLtJ_T0073603.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138570386 138584680 - MGP_NODShiLtJ_P0073603 Trafd1 protein_coding protein_coding MGP_NODShiLtJ_T0073604.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138570388 138572131 - MGP_NODShiLtJ_P0073604 Trafd1 protein_coding protein_coding MGP_NODShiLtJ_T0073605.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138577212 138584057 - MGP_NODShiLtJ_P0073605 Trafd1 protein_coding protein_coding MGP_NODShiLtJ_T0073606.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138577458 138584686 - MGP_NODShiLtJ_P0073606 Trafd1 protein_coding protein_coding MGP_NODShiLtJ_T0073607.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138578177 138584738 - MGP_NODShiLtJ_P0073607 Trafd1 protein_coding protein_coding MGP_NODShiLtJ_T0073608.1 MGP_NODShiLtJ_G0029825.1 mouse_genomes_project 5 138582746 138584008 - Trafd1 protein_coding processed_transcript MGP_NODShiLtJ_T0004582.1 MGP_NODShiLtJ_G0003967.1 mouse_genomes_project 5 21378698 21384103 + A630072M18Rik antisense antisense MGP_NODShiLtJ_T0001774.1 MGP_NODShiLtJ_G0001688.1 mouse_genomes_project 5 140432864 140435677 + TEC TEC MGP_NODShiLtJ_T0071956.1 MGP_NODShiLtJ_G0029455.1 mouse_genomes_project 5 86085057 86090552 + MGP_NODShiLtJ_P0071956 Arl9 protein_coding protein_coding MGP_NODShiLtJ_T0071957.1 MGP_NODShiLtJ_G0029455.1 mouse_genomes_project 5 86087540 86091681 + MGP_NODShiLtJ_P0071957 Arl9 protein_coding protein_coding MGP_NODShiLtJ_T0072116.1 MGP_NODShiLtJ_G0029502.1 mouse_genomes_project 5 100832358 100844376 + MGP_NODShiLtJ_P0072116 Smr2 protein_coding protein_coding MGP_NODShiLtJ_T0072117.1 MGP_NODShiLtJ_G0029502.1 mouse_genomes_project 5 100832358 100854809 + MGP_NODShiLtJ_P0072117 Smr2 protein_coding protein_coding MGP_NODShiLtJ_T0072118.1 MGP_NODShiLtJ_G0029502.1 mouse_genomes_project 5 100832358 100854809 + MGP_NODShiLtJ_P0072118 Smr2 protein_coding protein_coding MGP_NODShiLtJ_T0072119.1 MGP_NODShiLtJ_G0029502.1 mouse_genomes_project 5 100832358 100854809 + MGP_NODShiLtJ_P0072119 Smr2 protein_coding protein_coding MGP_NODShiLtJ_T0070157.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25337755 25348860 - Smarcd3 protein_coding retained_intron MGP_NODShiLtJ_T0070158.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25339559 25371341 - MGP_NODShiLtJ_P0070158 Smarcd3 protein_coding protein_coding MGP_NODShiLtJ_T0070159.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25339559 25348896 - MGP_NODShiLtJ_P0070159 Smarcd3 protein_coding protein_coding MGP_NODShiLtJ_T0070161.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25341633 25343788 - Smarcd3 protein_coding retained_intron MGP_NODShiLtJ_T0070162.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25342102 25348819 - Smarcd3 protein_coding retained_intron MGP_NODShiLtJ_T0070163.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25342673 25345865 - Smarcd3 protein_coding retained_intron MGP_NODShiLtJ_T0070164.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25342684 25343928 - Smarcd3 protein_coding retained_intron MGP_NODShiLtJ_T0070165.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25342805 25348784 - Smarcd3 protein_coding retained_intron MGP_NODShiLtJ_T0070166.1 MGP_NODShiLtJ_G0029154.1 mouse_genomes_project 5 25369455 25370066 - Smarcd3 protein_coding processed_transcript MGP_NODShiLtJ_T0008048.1 MGP_NODShiLtJ_G0006551.1 mouse_genomes_project 5 45636577 45640902 - Gm42711 lincRNA lincRNA MGP_NODShiLtJ_T0069880.1 MGP_NODShiLtJ_G0029103.1 mouse_genomes_project 5 13709247 14211091 + MGP_NODShiLtJ_P0069880 Pclo protein_coding protein_coding MGP_NODShiLtJ_T0069881.1 MGP_NODShiLtJ_G0029103.1 mouse_genomes_project 5 13709247 14098511 + MGP_NODShiLtJ_P0069881 Pclo protein_coding protein_coding MGP_NODShiLtJ_T0069882.1 MGP_NODShiLtJ_G0029103.1 mouse_genomes_project 5 13709322 14198415 + Pclo protein_coding retained_intron MGP_NODShiLtJ_T0069883.1 MGP_NODShiLtJ_G0029103.1 mouse_genomes_project 5 13928533 14098522 + MGP_NODShiLtJ_P0069883 Pclo protein_coding protein_coding MGP_NODShiLtJ_T0072587.1 MGP_NODShiLtJ_G0029609.1 mouse_genomes_project 5 118825525 118833019 - MGP_NODShiLtJ_P0072587 Gm17660 protein_coding protein_coding MGP_NODShiLtJ_T0072588.1 MGP_NODShiLtJ_G0029609.1 mouse_genomes_project 5 118825551 118833003 - MGP_NODShiLtJ_P0072588 Gm17660 protein_coding protein_coding MGP_NODShiLtJ_T0072589.1 MGP_NODShiLtJ_G0029609.1 mouse_genomes_project 5 118826709 118833019 - MGP_NODShiLtJ_P0072589 Gm17660 protein_coding protein_coding MGP_NODShiLtJ_T0071359.1 MGP_NODShiLtJ_G0029355.1 mouse_genomes_project 5 57034531 57151231 - MGP_NODShiLtJ_P0071359 Sel1l3 protein_coding protein_coding MGP_NODShiLtJ_T0071360.1 MGP_NODShiLtJ_G0029355.1 mouse_genomes_project 5 57074412 57151094 - Sel1l3 protein_coding retained_intron MGP_NODShiLtJ_T0071361.1 MGP_NODShiLtJ_G0029355.1 mouse_genomes_project 5 57083953 57087328 - Sel1l3 protein_coding retained_intron MGP_NODShiLtJ_T0071362.1 MGP_NODShiLtJ_G0029355.1 mouse_genomes_project 5 57086242 57103751 - Sel1l3 protein_coding processed_transcript MGP_NODShiLtJ_T0071363.1 MGP_NODShiLtJ_G0029355.1 mouse_genomes_project 5 57136008 57152747 - Sel1l3 protein_coding retained_intron MGP_NODShiLtJ_T0070929.1 MGP_NODShiLtJ_G0029279.1 mouse_genomes_project 5 36870307 36900621 + MGP_NODShiLtJ_P0070929 Dok7 protein_coding protein_coding MGP_NODShiLtJ_T0070930.1 MGP_NODShiLtJ_G0029279.1 mouse_genomes_project 5 36870403 36900621 + MGP_NODShiLtJ_P0070930 Dok7 protein_coding protein_coding MGP_NODShiLtJ_T0070931.1 MGP_NODShiLtJ_G0029279.1 mouse_genomes_project 5 36870429 36885231 + MGP_NODShiLtJ_P0070931 Dok7 protein_coding protein_coding MGP_NODShiLtJ_T0070932.1 MGP_NODShiLtJ_G0029279.1 mouse_genomes_project 5 36870618 36907496 + MGP_NODShiLtJ_P0070932 Dok7 protein_coding protein_coding MGP_NODShiLtJ_T0070933.1 MGP_NODShiLtJ_G0029279.1 mouse_genomes_project 5 36894617 36900621 + Dok7 protein_coding retained_intron MGP_NODShiLtJ_T0014875.1 MGP_NODShiLtJ_G0012983.1 mouse_genomes_project 5 66122748 66123182 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008169.1 MGP_NODShiLtJ_G0006649.1 mouse_genomes_project 5 117900620 117975598 - 4930429D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0073923.1 MGP_NODShiLtJ_G0029873.1 mouse_genomes_project 5 141016462 141017885 + MGP_NODShiLtJ_P0073923 B3gnt4 protein_coding protein_coding MGP_NODShiLtJ_T0073437.1 MGP_NODShiLtJ_G0029786.1 mouse_genomes_project 5 134026218 134063107 + MGP_NODShiLtJ_P0073437 Vsig10 protein_coding protein_coding MGP_NODShiLtJ_T0073438.1 MGP_NODShiLtJ_G0029786.1 mouse_genomes_project 5 134026427 134061213 + MGP_NODShiLtJ_P0073438 Vsig10 protein_coding protein_coding MGP_NODShiLtJ_T0073439.1 MGP_NODShiLtJ_G0029786.1 mouse_genomes_project 5 134026453 134045860 + Vsig10 protein_coding retained_intron MGP_NODShiLtJ_T0073440.1 MGP_NODShiLtJ_G0029786.1 mouse_genomes_project 5 134026496 134032283 + Vsig10 protein_coding retained_intron MGP_NODShiLtJ_T0073441.1 MGP_NODShiLtJ_G0029786.1 mouse_genomes_project 5 134030780 134063099 + Vsig10 protein_coding processed_transcript MGP_NODShiLtJ_T0073442.1 MGP_NODShiLtJ_G0029786.1 mouse_genomes_project 5 134058011 134063107 + Vsig10 protein_coding processed_transcript MGP_NODShiLtJ_T0008096.1 MGP_NODShiLtJ_G0006591.1 mouse_genomes_project 5 82817118 82819114 + C78283 lincRNA lincRNA MGP_NODShiLtJ_T0101146.1 MGP_NODShiLtJ_G0039477.1 mouse_genomes_project 5 48626938 48627817 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0074313.1 MGP_NODShiLtJ_G0029940.1 mouse_genomes_project 5 148031036 148044090 - MGP_NODShiLtJ_P0074313 Asl protein_coding protein_coding MGP_NODShiLtJ_T0074314.1 MGP_NODShiLtJ_G0029940.1 mouse_genomes_project 5 148031272 148034501 - MGP_NODShiLtJ_P0074314 Asl protein_coding protein_coding MGP_NODShiLtJ_T0074315.1 MGP_NODShiLtJ_G0029940.1 mouse_genomes_project 5 148031273 148050025 - MGP_NODShiLtJ_P0074315 Asl protein_coding protein_coding MGP_NODShiLtJ_T0074316.1 MGP_NODShiLtJ_G0029940.1 mouse_genomes_project 5 148031282 148045844 - MGP_NODShiLtJ_P0074316 Asl protein_coding protein_coding MGP_NODShiLtJ_T0074317.1 MGP_NODShiLtJ_G0029940.1 mouse_genomes_project 5 148033225 148044009 - MGP_NODShiLtJ_P0074317 Asl protein_coding protein_coding MGP_NODShiLtJ_T0074318.1 MGP_NODShiLtJ_G0029940.1 mouse_genomes_project 5 148036532 148044082 - Asl protein_coding processed_transcript MGP_NODShiLtJ_T0074319.1 MGP_NODShiLtJ_G0029940.1 mouse_genomes_project 5 148039433 148044026 - MGP_NODShiLtJ_P0074319 Asl protein_coding protein_coding MGP_NODShiLtJ_T0074320.1 MGP_NODShiLtJ_G0029940.1 mouse_genomes_project 5 148042010 148044054 - Asl protein_coding retained_intron MGP_NODShiLtJ_T0099339.1 MGP_NODShiLtJ_G0037733.1 mouse_genomes_project 5 24503977 24504132 - Gm22054 snRNA snRNA MGP_NODShiLtJ_T0001790.1 MGP_NODShiLtJ_G0001703.1 mouse_genomes_project 5 144793519 144796372 + TEC TEC MGP_NODShiLtJ_T0004782.1 MGP_NODShiLtJ_G0004114.1 mouse_genomes_project 5 142664311 142667830 + Gm42839 antisense antisense MGP_NODShiLtJ_T0014840.1 MGP_NODShiLtJ_G0012948.1 mouse_genomes_project 5 43805909 43806888 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099402.1 MGP_NODShiLtJ_G0037796.1 mouse_genomes_project 5 154629916 154630088 - Gm22214 snRNA snRNA MGP_NODShiLtJ_T0001544.1 MGP_NODShiLtJ_G0001460.1 mouse_genomes_project 5 52702387 52704873 - TEC TEC MGP_NODShiLtJ_T0014753.1 MGP_NODShiLtJ_G0012861.1 mouse_genomes_project 5 18293538 18293998 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001691.1 MGP_NODShiLtJ_G0001605.1 mouse_genomes_project 5 115336337 115337413 - TEC TEC MGP_NODShiLtJ_T0001538.1 MGP_NODShiLtJ_G0001454.1 mouse_genomes_project 5 52534535 52538001 + TEC TEC MGP_NODShiLtJ_T0075400.1 MGP_NODShiLtJ_G0030147.1 mouse_genomes_project 5 163530270 163537141 - MGP_NODShiLtJ_P0075400 Ocm protein_coding protein_coding MGP_NODShiLtJ_T0075401.1 MGP_NODShiLtJ_G0030147.1 mouse_genomes_project 5 163530542 163536248 - MGP_NODShiLtJ_P0075401 Ocm protein_coding protein_coding MGP_NODShiLtJ_T0075402.1 MGP_NODShiLtJ_G0030147.1 mouse_genomes_project 5 163534981 163537212 - MGP_NODShiLtJ_P0075402 Ocm protein_coding protein_coding MGP_NODShiLtJ_T0100621.1 MGP_NODShiLtJ_G0039015.1 mouse_genomes_project 5 86815941 86816064 - Gm22011 snoRNA snoRNA MGP_NODShiLtJ_T0001509.1 MGP_NODShiLtJ_G0001425.1 mouse_genomes_project 5 47494584 47498152 - TEC TEC MGP_NODShiLtJ_T0072014.1 MGP_NODShiLtJ_G0029465.1 mouse_genomes_project 5 95397745 95957371 - MGP_NODShiLtJ_P0072014 Epha5 protein_coding protein_coding MGP_NODShiLtJ_T0072015.1 MGP_NODShiLtJ_G0029465.1 mouse_genomes_project 5 95400775 95957256 - MGP_NODShiLtJ_P0072015 Epha5 protein_coding protein_coding MGP_NODShiLtJ_T0072016.1 MGP_NODShiLtJ_G0029465.1 mouse_genomes_project 5 95400775 95957256 - MGP_NODShiLtJ_P0072016 Epha5 protein_coding protein_coding MGP_NODShiLtJ_T0072017.1 MGP_NODShiLtJ_G0029465.1 mouse_genomes_project 5 95473560 95957371 - Epha5 protein_coding retained_intron MGP_NODShiLtJ_T0072018.1 MGP_NODShiLtJ_G0029465.1 mouse_genomes_project 5 95553667 95957371 - Epha5 protein_coding retained_intron MGP_NODShiLtJ_T0072019.1 MGP_NODShiLtJ_G0029465.1 mouse_genomes_project 5 95702732 95957832 - Epha5 protein_coding retained_intron MGP_NODShiLtJ_T0072020.1 MGP_NODShiLtJ_G0029465.1 mouse_genomes_project 5 95844382 95957832 - Epha5 protein_coding retained_intron MGP_NODShiLtJ_T0072021.1 MGP_NODShiLtJ_G0029465.1 mouse_genomes_project 5 95879108 95883911 - Epha5 protein_coding retained_intron MGP_NODShiLtJ_T0018017.1 MGP_NODShiLtJ_G0015472.1 mouse_genomes_project 5 103548041 103585944 - Gm43448 processed_transcript processed_transcript MGP_NODShiLtJ_T0018018.1 MGP_NODShiLtJ_G0015472.1 mouse_genomes_project 5 103566257 103585964 - Gm43448 processed_transcript processed_transcript MGP_NODShiLtJ_T0075653.1 MGP_NODShiLtJ_G0030205.1 mouse_genomes_project 5 169218929 169279212 - MGP_NODShiLtJ_P0075653 Katnal1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0075654.1 MGP_NODShiLtJ_G0030205.1 mouse_genomes_project 5 169218936 169278914 - MGP_NODShiLtJ_P0075654 Katnal1 protein_coding protein_coding MGP_NODShiLtJ_T0075655.1 MGP_NODShiLtJ_G0030205.1 mouse_genomes_project 5 169223026 169226433 - Katnal1 protein_coding retained_intron MGP_NODShiLtJ_T0075656.1 MGP_NODShiLtJ_G0030205.1 mouse_genomes_project 5 169234270 169279267 - Katnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0075657.1 MGP_NODShiLtJ_G0030205.1 mouse_genomes_project 5 169242239 169279586 - MGP_NODShiLtJ_P0075657 Katnal1 protein_coding protein_coding MGP_NODShiLtJ_T0075659.1 MGP_NODShiLtJ_G0030205.1 mouse_genomes_project 5 169253989 169278895 - MGP_NODShiLtJ_P0075659 Katnal1 protein_coding protein_coding MGP_NODShiLtJ_T0075660.1 MGP_NODShiLtJ_G0030205.1 mouse_genomes_project 5 169274887 169278932 - Katnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0073536.1 MGP_NODShiLtJ_G0029807.1 mouse_genomes_project 5 137580491 137605129 + MGP_NODShiLtJ_P0073536 Iqcd protein_coding protein_coding MGP_NODShiLtJ_T0073537.1 MGP_NODShiLtJ_G0029807.1 mouse_genomes_project 5 137580498 137605133 + MGP_NODShiLtJ_P0073537 Iqcd protein_coding protein_coding MGP_NODShiLtJ_T0100637.1 MGP_NODShiLtJ_G0039031.1 mouse_genomes_project 5 123221009 123221141 + Gm26387 snoRNA snoRNA MGP_NODShiLtJ_T0007977.1 MGP_NODShiLtJ_G0006508.1 mouse_genomes_project 5 15247451 15270240 - 4930519H02Rik lincRNA lincRNA MGP_NODShiLtJ_T0007978.1 MGP_NODShiLtJ_G0006508.1 mouse_genomes_project 5 15251125 15270303 - 4930519H02Rik lincRNA lincRNA MGP_NODShiLtJ_T0014835.1 MGP_NODShiLtJ_G0012943.1 mouse_genomes_project 5 39323153 39323633 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073572.1 MGP_NODShiLtJ_G0029817.1 mouse_genomes_project 5 137937651 137999043 + MGP_NODShiLtJ_P0073572 Oas1h protein_coding protein_coding MGP_NODShiLtJ_T0074660.1 MGP_NODShiLtJ_G0029999.1 mouse_genomes_project 5 154559229 154567166 + MGP_NODShiLtJ_P0074660 Upk3b protein_coding protein_coding MGP_NODShiLtJ_T0098398.1 MGP_NODShiLtJ_G0036803.1 mouse_genomes_project 5 35961424 35964885 - sense_intronic sense_intronic MGP_NODShiLtJ_T0072164.1 MGP_NODShiLtJ_G0029519.1 mouse_genomes_project 5 103162084 103171401 - MGP_NODShiLtJ_P0072164 Cox18 protein_coding protein_coding MGP_NODShiLtJ_T0072165.1 MGP_NODShiLtJ_G0029519.1 mouse_genomes_project 5 103162084 103171372 - MGP_NODShiLtJ_P0072165 Cox18 protein_coding protein_coding MGP_NODShiLtJ_T0072166.1 MGP_NODShiLtJ_G0029519.1 mouse_genomes_project 5 103162087 103162942 - Cox18 protein_coding processed_transcript MGP_NODShiLtJ_T0072167.1 MGP_NODShiLtJ_G0029519.1 mouse_genomes_project 5 103162087 103165239 - Cox18 protein_coding retained_intron MGP_NODShiLtJ_T0072168.1 MGP_NODShiLtJ_G0029519.1 mouse_genomes_project 5 103162090 103163383 - Cox18 protein_coding retained_intron MGP_NODShiLtJ_T0072169.1 MGP_NODShiLtJ_G0029519.1 mouse_genomes_project 5 103164893 103167152 - Cox18 protein_coding retained_intron MGP_NODShiLtJ_T0072170.1 MGP_NODShiLtJ_G0029519.1 mouse_genomes_project 5 103166294 103171339 - MGP_NODShiLtJ_P0072170 Cox18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072781.1 MGP_NODShiLtJ_G0029657.1 mouse_genomes_project 5 123858989 123866731 - MGP_NODShiLtJ_P0072781 Mfsd7a protein_coding protein_coding MGP_NODShiLtJ_T0008345.1 MGP_NODShiLtJ_G0006759.1 mouse_genomes_project 5 155853769 155861760 + lincRNA lincRNA MGP_NODShiLtJ_T0014954.1 MGP_NODShiLtJ_G0013062.1 mouse_genomes_project 5 104827947 104828322 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073609.1 MGP_NODShiLtJ_G0029826.1 mouse_genomes_project 5 138598449 138643915 + MGP_NODShiLtJ_P0073609 Naa25 protein_coding protein_coding MGP_NODShiLtJ_T0073610.1 MGP_NODShiLtJ_G0029826.1 mouse_genomes_project 5 138598507 138640324 + MGP_NODShiLtJ_P0073610 Naa25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073611.1 MGP_NODShiLtJ_G0029826.1 mouse_genomes_project 5 138598508 138628030 + Naa25 protein_coding retained_intron MGP_NODShiLtJ_T0073612.1 MGP_NODShiLtJ_G0029826.1 mouse_genomes_project 5 138598518 138641435 + MGP_NODShiLtJ_P0073612 Naa25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073614.1 MGP_NODShiLtJ_G0029826.1 mouse_genomes_project 5 138640921 138645883 + MGP_NODShiLtJ_P0073614 Naa25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073615.1 MGP_NODShiLtJ_G0029826.1 mouse_genomes_project 5 138641506 138642020 + Naa25 protein_coding processed_transcript MGP_NODShiLtJ_T0008336.1 MGP_NODShiLtJ_G0006753.1 mouse_genomes_project 5 151795071 151856795 - Gm42624 lincRNA lincRNA MGP_NODShiLtJ_T0010580.1 MGP_NODShiLtJ_G0008713.1 mouse_genomes_project 5 72317371 72317449 + Mir574 miRNA miRNA MGP_NODShiLtJ_T0007996.1 MGP_NODShiLtJ_G0006519.1 mouse_genomes_project 5 26376038 26377491 + 1700096K18Rik lincRNA lincRNA MGP_NODShiLtJ_T0001467.1 MGP_NODShiLtJ_G0001383.1 mouse_genomes_project 5 34116473 34117428 - TEC TEC MGP_NODShiLtJ_T0014750.1 MGP_NODShiLtJ_G0012858.1 mouse_genomes_project 5 16032565 16033584 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011505.1 MGP_NODShiLtJ_G0009638.1 mouse_genomes_project 5 158445645 158445922 + Gm27316 misc_RNA misc_RNA MGP_NODShiLtJ_T0004667.1 MGP_NODShiLtJ_G0004036.1 mouse_genomes_project 5 86522405 86529491 + Gm43261 antisense antisense MGP_NODShiLtJ_T0008004.1 MGP_NODShiLtJ_G0006523.1 mouse_genomes_project 5 29046005 29101069 - Gm26608 lincRNA lincRNA MGP_NODShiLtJ_T0008005.1 MGP_NODShiLtJ_G0006523.1 mouse_genomes_project 5 29081368 29082877 - Gm26608 lincRNA lincRNA MGP_NODShiLtJ_T0014783.1 MGP_NODShiLtJ_G0012891.1 mouse_genomes_project 5 24717868 24718393 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017995.1 MGP_NODShiLtJ_G0015464.1 mouse_genomes_project 5 56875306 56911967 - processed_transcript lincRNA MGP_NODShiLtJ_T0017996.1 MGP_NODShiLtJ_G0015464.1 mouse_genomes_project 5 56875318 56909833 - processed_transcript lincRNA MGP_NODShiLtJ_T0017997.1 MGP_NODShiLtJ_G0015464.1 mouse_genomes_project 5 56907969 56909884 - processed_transcript retained_intron MGP_NODShiLtJ_T0008412.1 MGP_NODShiLtJ_G0006811.1 mouse_genomes_project 5 171972224 172036638 - D730045B01Rik lincRNA lincRNA MGP_NODShiLtJ_T0008413.1 MGP_NODShiLtJ_G0006811.1 mouse_genomes_project 5 171973368 171973677 - D730045B01Rik lincRNA lincRNA MGP_NODShiLtJ_T0070142.1 MGP_NODShiLtJ_G0029149.1 mouse_genomes_project 5 25235874 25261793 - MGP_NODShiLtJ_P0070142 Gbx1 protein_coding protein_coding MGP_NODShiLtJ_T0070709.1 MGP_NODShiLtJ_G0029249.1 mouse_genomes_project 5 34993586 35035947 + Uvssa protein_coding retained_intron MGP_NODShiLtJ_T0070710.1 MGP_NODShiLtJ_G0029249.1 mouse_genomes_project 5 34993733 35045167 + MGP_NODShiLtJ_P0070710 Uvssa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070711.1 MGP_NODShiLtJ_G0029249.1 mouse_genomes_project 5 34993733 35045167 + MGP_NODShiLtJ_P0070711 Uvssa protein_coding protein_coding MGP_NODShiLtJ_T0070712.1 MGP_NODShiLtJ_G0029249.1 mouse_genomes_project 5 34993809 35045167 + MGP_NODShiLtJ_P0070712 Uvssa protein_coding protein_coding MGP_NODShiLtJ_T0071183.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46396517 46437057 - MGP_NODShiLtJ_P0071183 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071184.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46396518 46428698 - MGP_NODShiLtJ_P0071184 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071185.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46396518 46437023 - MGP_NODShiLtJ_P0071185 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071186.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46396518 46437064 - MGP_NODShiLtJ_P0071186 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071187.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46396526 46479869 - MGP_NODShiLtJ_P0071187 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071188.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46402511 46437016 - MGP_NODShiLtJ_P0071188 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071189.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46407810 46437035 - MGP_NODShiLtJ_P0071189 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071190.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46409790 46437051 - MGP_NODShiLtJ_P0071190 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071191.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46410595 46411790 - Fbxl5 protein_coding retained_intron MGP_NODShiLtJ_T0071192.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46417420 46437032 - Fbxl5 protein_coding retained_intron MGP_NODShiLtJ_T0071193.1 MGP_NODShiLtJ_G0029327.1 mouse_genomes_project 5 46423219 46437014 - MGP_NODShiLtJ_P0071193 Fbxl5 protein_coding protein_coding MGP_NODShiLtJ_T0071336.1 MGP_NODShiLtJ_G0029352.1 mouse_genomes_project 5 56654339 56711943 + Zcchc4 protein_coding processed_transcript MGP_NODShiLtJ_T0071337.1 MGP_NODShiLtJ_G0029352.1 mouse_genomes_project 5 56662905 56711686 + MGP_NODShiLtJ_P0071337 Zcchc4 protein_coding protein_coding MGP_NODShiLtJ_T0071338.1 MGP_NODShiLtJ_G0029352.1 mouse_genomes_project 5 56662905 56712780 + MGP_NODShiLtJ_P0071338 Zcchc4 protein_coding protein_coding MGP_NODShiLtJ_T0071339.1 MGP_NODShiLtJ_G0029352.1 mouse_genomes_project 5 56662937 56682185 + Zcchc4 protein_coding retained_intron MGP_NODShiLtJ_T0071340.1 MGP_NODShiLtJ_G0029352.1 mouse_genomes_project 5 56662967 56676777 + MGP_NODShiLtJ_P0071340 Zcchc4 protein_coding protein_coding MGP_NODShiLtJ_T0071341.1 MGP_NODShiLtJ_G0029352.1 mouse_genomes_project 5 56662973 56676809 + Zcchc4 protein_coding processed_transcript MGP_NODShiLtJ_T0071342.1 MGP_NODShiLtJ_G0029352.1 mouse_genomes_project 5 56678707 56707299 + Zcchc4 protein_coding processed_transcript MGP_NODShiLtJ_T0071343.1 MGP_NODShiLtJ_G0029352.1 mouse_genomes_project 5 56686331 56703995 + Zcchc4 protein_coding retained_intron MGP_NODShiLtJ_T0072246.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105197944 105232845 - MGP_NODShiLtJ_P0072246 G3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0072247.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105197962 105233007 - MGP_NODShiLtJ_P0072247 G3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0072248.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105199515 105232526 - MGP_NODShiLtJ_P0072248 G3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0072249.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105199515 105232801 - MGP_NODShiLtJ_P0072249 G3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0072250.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105200298 105232946 - MGP_NODShiLtJ_P0072250 G3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0072251.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105202158 105215797 - G3bp2 protein_coding processed_transcript MGP_NODShiLtJ_T0072252.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105203619 105215788 - G3bp2 protein_coding retained_intron MGP_NODShiLtJ_T0072253.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105214799 105222015 - MGP_NODShiLtJ_P0072253 G3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0072254.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105216589 105232551 - MGP_NODShiLtJ_P0072254 G3bp2 protein_coding protein_coding MGP_NODShiLtJ_T0072255.1 MGP_NODShiLtJ_G0029543.1 mouse_genomes_project 5 105218164 105233005 - G3bp2 protein_coding retained_intron MGP_NODShiLtJ_T0001844.1 MGP_NODShiLtJ_G0001756.1 mouse_genomes_project 5 154902535 154906893 - TEC TEC MGP_NODShiLtJ_T0074680.1 MGP_NODShiLtJ_G0030002.1 mouse_genomes_project 5 154651073 154659476 + MGP_NODShiLtJ_P0074680 Polr2j protein_coding protein_coding MGP_NODShiLtJ_T0074681.1 MGP_NODShiLtJ_G0030002.1 mouse_genomes_project 5 154651073 154659252 + MGP_NODShiLtJ_P0074681 Polr2j protein_coding protein_coding MGP_NODShiLtJ_T0074682.1 MGP_NODShiLtJ_G0030002.1 mouse_genomes_project 5 154651144 154659465 + MGP_NODShiLtJ_P0074682 Polr2j protein_coding protein_coding MGP_NODShiLtJ_T0001768.1 MGP_NODShiLtJ_G0001682.1 mouse_genomes_project 5 139839787 139841983 - TEC TEC MGP_NODShiLtJ_T0098204.1 MGP_NODShiLtJ_G0036616.1 mouse_genomes_project 5 105201862 105201991 - Gm22728 scaRNA scaRNA MGP_NODShiLtJ_T0074958.1 MGP_NODShiLtJ_G0030055.1 mouse_genomes_project 5 156867935 156900570 + MGP_NODShiLtJ_P0074958 protein_coding protein_coding MGP_NODShiLtJ_T0001783.1 MGP_NODShiLtJ_G0001697.1 mouse_genomes_project 5 141870941 141872255 - TEC TEC MGP_NODShiLtJ_T0071089.1 MGP_NODShiLtJ_G0029309.1 mouse_genomes_project 5 40109694 40132411 - MGP_NODShiLtJ_P0071089 Nsg1 protein_coding protein_coding MGP_NODShiLtJ_T0071090.1 MGP_NODShiLtJ_G0029309.1 mouse_genomes_project 5 40110637 40111332 - MGP_NODShiLtJ_P0071090 Nsg1 protein_coding protein_coding MGP_NODShiLtJ_T0071091.1 MGP_NODShiLtJ_G0029309.1 mouse_genomes_project 5 40110758 40131535 - MGP_NODShiLtJ_P0071091 Nsg1 protein_coding protein_coding MGP_NODShiLtJ_T0071092.1 MGP_NODShiLtJ_G0029309.1 mouse_genomes_project 5 40111045 40131909 - MGP_NODShiLtJ_P0071092 Nsg1 protein_coding protein_coding MGP_NODShiLtJ_T0071093.1 MGP_NODShiLtJ_G0029309.1 mouse_genomes_project 5 40117216 40131866 - MGP_NODShiLtJ_P0071093 Nsg1 protein_coding protein_coding MGP_NODShiLtJ_T0071094.1 MGP_NODShiLtJ_G0029309.1 mouse_genomes_project 5 40127836 40131977 - Nsg1 protein_coding retained_intron MGP_NODShiLtJ_T0071095.1 MGP_NODShiLtJ_G0029309.1 mouse_genomes_project 5 40131409 40131909 - MGP_NODShiLtJ_P0071095 Nsg1 protein_coding protein_coding MGP_NODShiLtJ_T0008340.1 MGP_NODShiLtJ_G0006757.1 mouse_genomes_project 5 155534149 155552773 + 4933404O12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008341.1 MGP_NODShiLtJ_G0006757.1 mouse_genomes_project 5 155534184 155549421 + 4933404O12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008342.1 MGP_NODShiLtJ_G0006757.1 mouse_genomes_project 5 155534355 155549340 + 4933404O12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008343.1 MGP_NODShiLtJ_G0006757.1 mouse_genomes_project 5 155534404 155552779 + 4933404O12Rik lincRNA lincRNA MGP_NODShiLtJ_T0074754.1 MGP_NODShiLtJ_G0030014.1 mouse_genomes_project 5 155602936 155608775 - MGP_NODShiLtJ_P0074754 Znhit1 protein_coding protein_coding MGP_NODShiLtJ_T0074755.1 MGP_NODShiLtJ_G0030014.1 mouse_genomes_project 5 155602961 155607579 - MGP_NODShiLtJ_P0074755 Znhit1 protein_coding protein_coding MGP_NODShiLtJ_T0074756.1 MGP_NODShiLtJ_G0030014.1 mouse_genomes_project 5 155602966 155607576 - MGP_NODShiLtJ_P0074756 Znhit1 protein_coding protein_coding MGP_NODShiLtJ_T0074757.1 MGP_NODShiLtJ_G0030014.1 mouse_genomes_project 5 155603093 155607979 - MGP_NODShiLtJ_P0074757 Znhit1 protein_coding protein_coding MGP_NODShiLtJ_T0074758.1 MGP_NODShiLtJ_G0030014.1 mouse_genomes_project 5 155603665 155608255 - MGP_NODShiLtJ_P0074758 Znhit1 protein_coding protein_coding MGP_NODShiLtJ_T0072491.1 MGP_NODShiLtJ_G0029591.1 mouse_genomes_project 5 115190899 115239945 - MGP_NODShiLtJ_P0072491 Hpse protein_coding protein_coding MGP_NODShiLtJ_T0072492.1 MGP_NODShiLtJ_G0029591.1 mouse_genomes_project 5 115196764 115239934 - MGP_NODShiLtJ_P0072492 Hpse protein_coding protein_coding MGP_NODShiLtJ_T0071793.1 MGP_NODShiLtJ_G0029428.1 mouse_genomes_project 5 82291996 82373730 + MGP_NODShiLtJ_P0071793 Dcun1d4 protein_coding protein_coding MGP_NODShiLtJ_T0071794.1 MGP_NODShiLtJ_G0029428.1 mouse_genomes_project 5 82295441 82370217 + Dcun1d4 protein_coding processed_transcript MGP_NODShiLtJ_T0071795.1 MGP_NODShiLtJ_G0029428.1 mouse_genomes_project 5 82302122 82373730 + MGP_NODShiLtJ_P0071795 Dcun1d4 protein_coding protein_coding MGP_NODShiLtJ_T0071796.1 MGP_NODShiLtJ_G0029428.1 mouse_genomes_project 5 82302164 82356224 + MGP_NODShiLtJ_P0071796 Dcun1d4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071797.1 MGP_NODShiLtJ_G0029428.1 mouse_genomes_project 5 82302220 82343696 + MGP_NODShiLtJ_P0071797 Dcun1d4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071798.1 MGP_NODShiLtJ_G0029428.1 mouse_genomes_project 5 82302264 82373723 + MGP_NODShiLtJ_P0071798 Dcun1d4 protein_coding protein_coding MGP_NODShiLtJ_T0071799.1 MGP_NODShiLtJ_G0029428.1 mouse_genomes_project 5 82303947 82332300 + Dcun1d4 protein_coding processed_transcript MGP_NODShiLtJ_T0071800.1 MGP_NODShiLtJ_G0029428.1 mouse_genomes_project 5 82322679 82346910 + MGP_NODShiLtJ_P0071800 Dcun1d4 protein_coding protein_coding MGP_NODShiLtJ_T0070358.1 MGP_NODShiLtJ_G0029197.1 mouse_genomes_project 5 31908985 31992186 + MGP_NODShiLtJ_P0070358 Dpysl5 protein_coding protein_coding MGP_NODShiLtJ_T0070359.1 MGP_NODShiLtJ_G0029197.1 mouse_genomes_project 5 31909003 31995233 + MGP_NODShiLtJ_P0070359 Dpysl5 protein_coding protein_coding MGP_NODShiLtJ_T0070360.1 MGP_NODShiLtJ_G0029197.1 mouse_genomes_project 5 31909010 31946179 + MGP_NODShiLtJ_P0070360 Dpysl5 protein_coding protein_coding MGP_NODShiLtJ_T0070361.1 MGP_NODShiLtJ_G0029197.1 mouse_genomes_project 5 31974061 31982866 + Dpysl5 protein_coding processed_transcript MGP_NODShiLtJ_T0070362.1 MGP_NODShiLtJ_G0029197.1 mouse_genomes_project 5 31984173 31992172 + Dpysl5 protein_coding retained_intron MGP_NODShiLtJ_T0070363.1 MGP_NODShiLtJ_G0029197.1 mouse_genomes_project 5 31987862 31992278 + Dpysl5 protein_coding retained_intron MGP_NODShiLtJ_T0070364.1 MGP_NODShiLtJ_G0029197.1 mouse_genomes_project 5 31989583 31992425 + Dpysl5 protein_coding retained_intron MGP_NODShiLtJ_T0001652.1 MGP_NODShiLtJ_G0001566.1 mouse_genomes_project 5 82938653 82939403 + TEC TEC MGP_NODShiLtJ_T0001455.1 MGP_NODShiLtJ_G0001373.1 mouse_genomes_project 5 32314696 32317007 + TEC TEC MGP_NODShiLtJ_T0001456.1 MGP_NODShiLtJ_G0001373.1 mouse_genomes_project 5 32314698 32317007 + TEC TEC MGP_NODShiLtJ_T0072399.1 MGP_NODShiLtJ_G0029572.1 mouse_genomes_project 5 112043539 112195834 - MGP_NODShiLtJ_P0072399 Antxr2 protein_coding protein_coding MGP_NODShiLtJ_T0072400.1 MGP_NODShiLtJ_G0029572.1 mouse_genomes_project 5 112083278 112195915 - MGP_NODShiLtJ_P0072400 Antxr2 protein_coding protein_coding MGP_NODShiLtJ_T0072401.1 MGP_NODShiLtJ_G0029572.1 mouse_genomes_project 5 112119983 112163757 - Antxr2 protein_coding processed_transcript MGP_NODShiLtJ_T0098418.1 MGP_NODShiLtJ_G0036822.1 mouse_genomes_project 5 162535605 162537180 - sense_intronic sense_intronic MGP_NODShiLtJ_T0008262.1 MGP_NODShiLtJ_G0006707.1 mouse_genomes_project 5 135197746 135198283 - Gm28563 lincRNA lincRNA MGP_NODShiLtJ_T0014953.1 MGP_NODShiLtJ_G0013061.1 mouse_genomes_project 5 104827944 104828322 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070630.1 MGP_NODShiLtJ_G0029235.1 mouse_genomes_project 5 33493733 33518381 + MGP_NODShiLtJ_P0070630 Fosl2 protein_coding protein_coding MGP_NODShiLtJ_T0070631.1 MGP_NODShiLtJ_G0029235.1 mouse_genomes_project 5 33494105 33500175 + Fosl2 protein_coding retained_intron MGP_NODShiLtJ_T0070632.1 MGP_NODShiLtJ_G0029235.1 mouse_genomes_project 5 33507059 33514252 + Fosl2 protein_coding retained_intron MGP_NODShiLtJ_T0071448.1 MGP_NODShiLtJ_G0029373.1 mouse_genomes_project 5 72317127 72394667 + MGP_NODShiLtJ_P0071448 Fam114a1 protein_coding protein_coding MGP_NODShiLtJ_T0071449.1 MGP_NODShiLtJ_G0029373.1 mouse_genomes_project 5 72319459 72353582 + MGP_NODShiLtJ_P0071449 Fam114a1 protein_coding protein_coding MGP_NODShiLtJ_T0069707.1 MGP_NODShiLtJ_G0029074.1 mouse_genomes_project 5 2612540 2653091 - MGP_NODShiLtJ_P0069707 1700015F17Rik protein_coding protein_coding MGP_NODShiLtJ_T0069708.1 MGP_NODShiLtJ_G0029074.1 mouse_genomes_project 5 2612540 2636468 - MGP_NODShiLtJ_P0069708 1700015F17Rik protein_coding protein_coding MGP_NODShiLtJ_T0069709.1 MGP_NODShiLtJ_G0029074.1 mouse_genomes_project 5 2612545 2653028 - MGP_NODShiLtJ_P0069709 1700015F17Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0008032.1 MGP_NODShiLtJ_G0006541.1 mouse_genomes_project 5 39752469 39753242 + Gm43763 lincRNA lincRNA MGP_NODShiLtJ_T0101150.1 MGP_NODShiLtJ_G0039481.1 mouse_genomes_project 5 73661298 73661677 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0071629.1 MGP_NODShiLtJ_G0029397.1 mouse_genomes_project 5 74885700 74937737 + MGP_NODShiLtJ_P0071629 Slc30a9 protein_coding protein_coding MGP_NODShiLtJ_T0071630.1 MGP_NODShiLtJ_G0029397.1 mouse_genomes_project 5 74885700 74937734 + MGP_NODShiLtJ_P0071630 Slc30a9 protein_coding protein_coding MGP_NODShiLtJ_T0071631.1 MGP_NODShiLtJ_G0029397.1 mouse_genomes_project 5 74885709 74888504 + Slc30a9 protein_coding retained_intron MGP_NODShiLtJ_T0071632.1 MGP_NODShiLtJ_G0029397.1 mouse_genomes_project 5 74885710 74935080 + MGP_NODShiLtJ_P0071632 Slc30a9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071633.1 MGP_NODShiLtJ_G0029397.1 mouse_genomes_project 5 74885929 74898338 + Slc30a9 protein_coding processed_transcript MGP_NODShiLtJ_T0071634.1 MGP_NODShiLtJ_G0029397.1 mouse_genomes_project 5 74895142 74921384 + MGP_NODShiLtJ_P0071634 Slc30a9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071635.1 MGP_NODShiLtJ_G0029397.1 mouse_genomes_project 5 74895168 74908165 + MGP_NODShiLtJ_P0071635 Slc30a9 protein_coding protein_coding MGP_NODShiLtJ_T0071636.1 MGP_NODShiLtJ_G0029397.1 mouse_genomes_project 5 74911766 74932650 + Slc30a9 protein_coding retained_intron MGP_NODShiLtJ_T0014805.1 MGP_NODShiLtJ_G0012913.1 mouse_genomes_project 5 30656063 30656420 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073881.1 MGP_NODShiLtJ_G0029865.1 mouse_genomes_project 5 140568613 140577304 + Setd1b protein_coding retained_intron MGP_NODShiLtJ_T0073882.1 MGP_NODShiLtJ_G0029865.1 mouse_genomes_project 5 140568613 140596249 + MGP_NODShiLtJ_P0073882 Setd1b protein_coding protein_coding MGP_NODShiLtJ_T0073883.1 MGP_NODShiLtJ_G0029865.1 mouse_genomes_project 5 140568613 140595121 + MGP_NODShiLtJ_P0073883 Setd1b protein_coding protein_coding MGP_NODShiLtJ_T0073884.1 MGP_NODShiLtJ_G0029865.1 mouse_genomes_project 5 140570280 140595121 + MGP_NODShiLtJ_P0073884 Setd1b protein_coding protein_coding MGP_NODShiLtJ_T0073885.1 MGP_NODShiLtJ_G0029865.1 mouse_genomes_project 5 140590961 140593246 + Setd1b protein_coding retained_intron MGP_NODShiLtJ_T0073886.1 MGP_NODShiLtJ_G0029865.1 mouse_genomes_project 5 140591634 140592361 + MGP_NODShiLtJ_P0073886 Setd1b protein_coding protein_coding MGP_NODShiLtJ_T0008398.1 MGP_NODShiLtJ_G0006800.1 mouse_genomes_project 5 170080371 170087765 + Gm43153 lincRNA lincRNA MGP_NODShiLtJ_T0072622.1 MGP_NODShiLtJ_G0029624.1 mouse_genomes_project 5 120298767 120447318 - MGP_NODShiLtJ_P0072622 protein_coding protein_coding MGP_NODShiLtJ_T0001723.1 MGP_NODShiLtJ_G0001637.1 mouse_genomes_project 5 128806637 128807938 + TEC TEC MGP_NODShiLtJ_T0073159.1 MGP_NODShiLtJ_G0029735.1 mouse_genomes_project 5 130574800 130594451 - MGP_NODShiLtJ_P0073159 Foxn4 protein_coding protein_coding MGP_NODShiLtJ_T0073160.1 MGP_NODShiLtJ_G0029735.1 mouse_genomes_project 5 130576217 130583759 - MGP_NODShiLtJ_P0073160 Foxn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073161.1 MGP_NODShiLtJ_G0029735.1 mouse_genomes_project 5 130580994 130594346 - MGP_NODShiLtJ_P0073161 Foxn4 protein_coding protein_coding MGP_NODShiLtJ_T0073162.1 MGP_NODShiLtJ_G0029735.1 mouse_genomes_project 5 130583344 130594393 - Foxn4 protein_coding retained_intron MGP_NODShiLtJ_T0073145.1 MGP_NODShiLtJ_G0029732.1 mouse_genomes_project 5 130430398 130434647 - MGP_NODShiLtJ_P0073145 Alkbh2 protein_coding protein_coding MGP_NODShiLtJ_T0073146.1 MGP_NODShiLtJ_G0029732.1 mouse_genomes_project 5 130430407 130434689 - MGP_NODShiLtJ_P0073146 Alkbh2 protein_coding protein_coding MGP_NODShiLtJ_T0073147.1 MGP_NODShiLtJ_G0029732.1 mouse_genomes_project 5 130434076 130434652 - MGP_NODShiLtJ_P0073147 Alkbh2 protein_coding protein_coding MGP_NODShiLtJ_T0014766.1 MGP_NODShiLtJ_G0012874.1 mouse_genomes_project 5 22169385 22170025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069793.1 MGP_NODShiLtJ_G0029087.1 mouse_genomes_project 5 6009593 6035962 - MGP_NODShiLtJ_P0069793 Dbf4 protein_coding protein_coding MGP_NODShiLtJ_T0069794.1 MGP_NODShiLtJ_G0029087.1 mouse_genomes_project 5 6009631 6035998 - MGP_NODShiLtJ_P0069794 Dbf4 protein_coding protein_coding MGP_NODShiLtJ_T0069795.1 MGP_NODShiLtJ_G0029087.1 mouse_genomes_project 5 6009774 6035864 - MGP_NODShiLtJ_P0069795 Dbf4 protein_coding protein_coding MGP_NODShiLtJ_T0069797.1 MGP_NODShiLtJ_G0029087.1 mouse_genomes_project 5 6014965 6035963 - Dbf4 protein_coding retained_intron MGP_NODShiLtJ_T0069798.1 MGP_NODShiLtJ_G0029087.1 mouse_genomes_project 5 6016448 6018544 - Dbf4 protein_coding retained_intron MGP_NODShiLtJ_T0069799.1 MGP_NODShiLtJ_G0029087.1 mouse_genomes_project 5 6031749 6035976 - Dbf4 protein_coding processed_transcript MGP_NODShiLtJ_T0069800.1 MGP_NODShiLtJ_G0029087.1 mouse_genomes_project 5 6035465 6035951 - Dbf4 protein_coding retained_intron MGP_NODShiLtJ_T0001574.1 MGP_NODShiLtJ_G0001490.1 mouse_genomes_project 5 63251191 63257524 + TEC TEC MGP_NODShiLtJ_T0008292.1 MGP_NODShiLtJ_G0006727.1 mouse_genomes_project 5 141572800 141637144 + Gm34086 lincRNA lincRNA MGP_NODShiLtJ_T0072324.1 MGP_NODShiLtJ_G0029556.1 mouse_genomes_project 5 105815453 105821008 - Ccdc158 protein_coding retained_intron MGP_NODShiLtJ_T0072325.1 MGP_NODShiLtJ_G0029556.1 mouse_genomes_project 5 105815752 105882185 - MGP_NODShiLtJ_P0072325 Ccdc158 protein_coding protein_coding MGP_NODShiLtJ_T0072326.1 MGP_NODShiLtJ_G0029556.1 mouse_genomes_project 5 105857269 105882325 - MGP_NODShiLtJ_P0072326 Ccdc158 protein_coding protein_coding MGP_NODShiLtJ_T0072327.1 MGP_NODShiLtJ_G0029556.1 mouse_genomes_project 5 105857269 105882331 - MGP_NODShiLtJ_P0072327 Ccdc158 protein_coding protein_coding MGP_NODShiLtJ_T0075681.1 MGP_NODShiLtJ_G0030210.1 mouse_genomes_project 5 169815080 169827541 + Medag protein_coding retained_intron MGP_NODShiLtJ_T0075682.1 MGP_NODShiLtJ_G0030210.1 mouse_genomes_project 5 169815286 169834423 + MGP_NODShiLtJ_P0075682 Medag protein_coding protein_coding MGP_NODShiLtJ_T0001846.1 MGP_NODShiLtJ_G0001758.1 mouse_genomes_project 5 156022740 156023677 + TEC TEC MGP_NODShiLtJ_T0070015.1 MGP_NODShiLtJ_G0029128.1 mouse_genomes_project 5 23009662 23078497 - MGP_NODShiLtJ_P0070015 Orc5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070016.1 MGP_NODShiLtJ_G0029128.1 mouse_genomes_project 5 23009667 23078538 - Orc5 protein_coding retained_intron MGP_NODShiLtJ_T0070017.1 MGP_NODShiLtJ_G0029128.1 mouse_genomes_project 5 23009671 23078609 - MGP_NODShiLtJ_P0070017 Orc5 protein_coding protein_coding MGP_NODShiLtJ_T0070018.1 MGP_NODShiLtJ_G0029128.1 mouse_genomes_project 5 23045971 23049544 - Orc5 protein_coding retained_intron MGP_NODShiLtJ_T0070019.1 MGP_NODShiLtJ_G0029128.1 mouse_genomes_project 5 23050393 23077753 - MGP_NODShiLtJ_P0070019 Orc5 protein_coding protein_coding MGP_NODShiLtJ_T0070020.1 MGP_NODShiLtJ_G0029128.1 mouse_genomes_project 5 23050428 23078609 - Orc5 protein_coding processed_transcript MGP_NODShiLtJ_T0070021.1 MGP_NODShiLtJ_G0029128.1 mouse_genomes_project 5 23074629 23078663 - Orc5 protein_coding processed_transcript MGP_NODShiLtJ_T0010607.1 MGP_NODShiLtJ_G0008740.1 mouse_genomes_project 5 139112463 139112528 - Mir7031 miRNA miRNA MGP_NODShiLtJ_T0001505.1 MGP_NODShiLtJ_G0001421.1 mouse_genomes_project 5 47355616 47359403 - TEC TEC MGP_NODShiLtJ_T0072503.1 MGP_NODShiLtJ_G0029593.1 mouse_genomes_project 5 115313497 115326622 + MGP_NODShiLtJ_P0072503 Mrps18c protein_coding protein_coding MGP_NODShiLtJ_T0072504.1 MGP_NODShiLtJ_G0029593.1 mouse_genomes_project 5 115313559 115321157 + MGP_NODShiLtJ_P0072504 Mrps18c protein_coding protein_coding MGP_NODShiLtJ_T0072505.1 MGP_NODShiLtJ_G0029593.1 mouse_genomes_project 5 115313613 115314560 + Mrps18c protein_coding retained_intron MGP_NODShiLtJ_T0072506.1 MGP_NODShiLtJ_G0029593.1 mouse_genomes_project 5 115313613 115326619 + MGP_NODShiLtJ_P0072506 Mrps18c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072507.1 MGP_NODShiLtJ_G0029593.1 mouse_genomes_project 5 115313617 115326622 + MGP_NODShiLtJ_P0072507 Mrps18c protein_coding protein_coding MGP_NODShiLtJ_T0072508.1 MGP_NODShiLtJ_G0029593.1 mouse_genomes_project 5 115320605 115326620 + Mrps18c protein_coding retained_intron MGP_NODShiLtJ_T0015004.1 MGP_NODShiLtJ_G0013112.1 mouse_genomes_project 5 125506187 125506550 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001462.1 MGP_NODShiLtJ_G0001379.1 mouse_genomes_project 5 33486821 33489710 - TEC TEC MGP_NODShiLtJ_T0001463.1 MGP_NODShiLtJ_G0001379.1 mouse_genomes_project 5 33486821 33489707 - TEC TEC MGP_NODShiLtJ_T0074569.1 MGP_NODShiLtJ_G0029980.1 mouse_genomes_project 5 153668417 153670710 - MGP_NODShiLtJ_P0074569 Fzd9 protein_coding protein_coding MGP_NODShiLtJ_T0008152.1 MGP_NODShiLtJ_G0006638.1 mouse_genomes_project 5 114121885 114147138 - Gm43248 lincRNA lincRNA MGP_NODShiLtJ_T0008153.1 MGP_NODShiLtJ_G0006638.1 mouse_genomes_project 5 114133439 114146676 - Gm43248 lincRNA lincRNA MGP_NODShiLtJ_T0008386.1 MGP_NODShiLtJ_G0006794.1 mouse_genomes_project 5 169516608 169517982 + Gm42787 lincRNA lincRNA MGP_NODShiLtJ_T0072671.1 MGP_NODShiLtJ_G0029633.1 mouse_genomes_project 5 122066157 122121104 - MGP_NODShiLtJ_P0072671 Hfm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072672.1 MGP_NODShiLtJ_G0029633.1 mouse_genomes_project 5 122066159 122168636 - MGP_NODShiLtJ_P0072672 Hfm1 protein_coding protein_coding MGP_NODShiLtJ_T0072673.1 MGP_NODShiLtJ_G0029633.1 mouse_genomes_project 5 122066162 122168276 - MGP_NODShiLtJ_P0072673 Hfm1 protein_coding protein_coding MGP_NODShiLtJ_T0072674.1 MGP_NODShiLtJ_G0029633.1 mouse_genomes_project 5 122066624 122169168 - MGP_NODShiLtJ_P0072674 Hfm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072675.1 MGP_NODShiLtJ_G0029633.1 mouse_genomes_project 5 122067527 122114787 - MGP_NODShiLtJ_P0072675 Hfm1 protein_coding protein_coding MGP_NODShiLtJ_T0072676.1 MGP_NODShiLtJ_G0029633.1 mouse_genomes_project 5 122138654 122168566 - Hfm1 protein_coding retained_intron MGP_NODShiLtJ_T0072677.1 MGP_NODShiLtJ_G0029633.1 mouse_genomes_project 5 122138654 122168276 - MGP_NODShiLtJ_P0072677 Hfm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072678.1 MGP_NODShiLtJ_G0029633.1 mouse_genomes_project 5 122140752 122168238 - MGP_NODShiLtJ_P0072678 Hfm1 protein_coding protein_coding MGP_NODShiLtJ_T0074989.1 MGP_NODShiLtJ_G0030061.1 mouse_genomes_project 5 157023621 157032102 + MGP_NODShiLtJ_P0074989 Ap4m1 protein_coding protein_coding MGP_NODShiLtJ_T0074990.1 MGP_NODShiLtJ_G0030061.1 mouse_genomes_project 5 157023624 157026640 + MGP_NODShiLtJ_P0074990 Ap4m1 protein_coding protein_coding MGP_NODShiLtJ_T0074991.1 MGP_NODShiLtJ_G0030061.1 mouse_genomes_project 5 157023666 157025999 + Ap4m1 protein_coding retained_intron MGP_NODShiLtJ_T0074992.1 MGP_NODShiLtJ_G0030061.1 mouse_genomes_project 5 157023687 157030361 + MGP_NODShiLtJ_P0074992 Ap4m1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074993.1 MGP_NODShiLtJ_G0030061.1 mouse_genomes_project 5 157024202 157026571 + Ap4m1 protein_coding retained_intron MGP_NODShiLtJ_T0074994.1 MGP_NODShiLtJ_G0030061.1 mouse_genomes_project 5 157026412 157028880 + Ap4m1 protein_coding retained_intron MGP_NODShiLtJ_T0074995.1 MGP_NODShiLtJ_G0030061.1 mouse_genomes_project 5 157028248 157030367 + Ap4m1 protein_coding retained_intron MGP_NODShiLtJ_T0008401.1 MGP_NODShiLtJ_G0006803.1 mouse_genomes_project 5 170365398 170366389 - Gm43452 lincRNA lincRNA MGP_NODShiLtJ_T0075395.1 MGP_NODShiLtJ_G0030146.1 mouse_genomes_project 5 163494879 163523648 - MGP_NODShiLtJ_P0075395 Ccz1 protein_coding protein_coding MGP_NODShiLtJ_T0075396.1 MGP_NODShiLtJ_G0030146.1 mouse_genomes_project 5 163498445 163499555 - Ccz1 protein_coding processed_transcript MGP_NODShiLtJ_T0075397.1 MGP_NODShiLtJ_G0030146.1 mouse_genomes_project 5 163499448 163511092 - Ccz1 protein_coding retained_intron MGP_NODShiLtJ_T0075398.1 MGP_NODShiLtJ_G0030146.1 mouse_genomes_project 5 163517202 163523672 - Ccz1 protein_coding retained_intron MGP_NODShiLtJ_T0075399.1 MGP_NODShiLtJ_G0030146.1 mouse_genomes_project 5 163520459 163523672 - Ccz1 protein_coding retained_intron MGP_NODShiLtJ_T0098044.1 MGP_NODShiLtJ_G0036456.1 mouse_genomes_project 5 57072410 57072489 + n-R5s171 rRNA rRNA MGP_NODShiLtJ_T0004754.1 MGP_NODShiLtJ_G0004093.1 mouse_genomes_project 5 137457057 137458119 - Gm15690 antisense antisense MGP_NODShiLtJ_T0070170.1 MGP_NODShiLtJ_G0029156.1 mouse_genomes_project 5 25470705 25489214 - MGP_NODShiLtJ_P0070170 Wdr86 protein_coding protein_coding MGP_NODShiLtJ_T0070171.1 MGP_NODShiLtJ_G0029156.1 mouse_genomes_project 5 25471229 25489167 - Wdr86 protein_coding retained_intron MGP_NODShiLtJ_T0070172.1 MGP_NODShiLtJ_G0029156.1 mouse_genomes_project 5 25471233 25472342 - Wdr86 protein_coding retained_intron MGP_NODShiLtJ_T0070173.1 MGP_NODShiLtJ_G0029156.1 mouse_genomes_project 5 25471602 25474546 - MGP_NODShiLtJ_P0070173 Wdr86 protein_coding protein_coding MGP_NODShiLtJ_T0098399.1 MGP_NODShiLtJ_G0036804.1 mouse_genomes_project 5 46551938 46553213 + Gm16014 sense_intronic sense_intronic MGP_NODShiLtJ_T0008039.1 MGP_NODShiLtJ_G0006544.1 mouse_genomes_project 5 40333804 40338541 + 4930487D11Rik lincRNA lincRNA MGP_NODShiLtJ_T0075558.1 MGP_NODShiLtJ_G0030187.1 mouse_genomes_project 5 166913532 166918199 + MGP_NODShiLtJ_P0075558 Rpl21 protein_coding protein_coding MGP_NODShiLtJ_T0075559.1 MGP_NODShiLtJ_G0030187.1 mouse_genomes_project 5 166913556 166918203 + MGP_NODShiLtJ_P0075559 Rpl21 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0075560.1 MGP_NODShiLtJ_G0030187.1 mouse_genomes_project 5 166913788 166915248 + Rpl21 protein_coding retained_intron MGP_NODShiLtJ_T0075561.1 MGP_NODShiLtJ_G0030187.1 mouse_genomes_project 5 166913837 166917138 + MGP_NODShiLtJ_P0075561 Rpl21 protein_coding protein_coding MGP_NODShiLtJ_T0075562.1 MGP_NODShiLtJ_G0030187.1 mouse_genomes_project 5 166913844 166917139 + MGP_NODShiLtJ_P0075562 Rpl21 protein_coding protein_coding MGP_NODShiLtJ_T0075563.1 MGP_NODShiLtJ_G0030187.1 mouse_genomes_project 5 166914834 166915607 + Rpl21 protein_coding retained_intron MGP_NODShiLtJ_T0075564.1 MGP_NODShiLtJ_G0030187.1 mouse_genomes_project 5 166915848 166917139 + Rpl21 protein_coding retained_intron MGP_NODShiLtJ_T0004606.1 MGP_NODShiLtJ_G0003987.1 mouse_genomes_project 5 35915656 35916657 + Gm42846 antisense antisense MGP_NODShiLtJ_T0008320.1 MGP_NODShiLtJ_G0006744.1 mouse_genomes_project 5 145375193 145376557 + Gm42980 lincRNA lincRNA MGP_NODShiLtJ_T0004764.1 MGP_NODShiLtJ_G0004103.1 mouse_genomes_project 5 140382582 140391572 + A930024E05Rik antisense antisense MGP_NODShiLtJ_T0072641.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121046533 121097679 + MGP_NODShiLtJ_P0072641 Zfp326 protein_coding protein_coding MGP_NODShiLtJ_T0072642.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121046536 121098717 + Zfp326 protein_coding retained_intron MGP_NODShiLtJ_T0072643.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121046536 121062840 + Zfp326 protein_coding retained_intron MGP_NODShiLtJ_T0072644.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121046536 121098717 + MGP_NODShiLtJ_P0072644 Zfp326 protein_coding protein_coding MGP_NODShiLtJ_T0072645.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121046544 121098076 + MGP_NODShiLtJ_P0072645 Zfp326 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072646.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121046651 121097908 + MGP_NODShiLtJ_P0072646 Zfp326 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072647.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121046909 121057020 + Zfp326 protein_coding processed_transcript MGP_NODShiLtJ_T0072648.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121048738 121090193 + Zfp326 protein_coding retained_intron MGP_NODShiLtJ_T0072649.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121065752 121077785 + Zfp326 protein_coding retained_intron MGP_NODShiLtJ_T0072650.1 MGP_NODShiLtJ_G0029629.1 mouse_genomes_project 5 121086194 121090606 + Zfp326 protein_coding retained_intron MGP_NODShiLtJ_T0008194.1 MGP_NODShiLtJ_G0006668.1 mouse_genomes_project 5 123773657 123774595 - Gm42518 lincRNA lincRNA MGP_NODShiLtJ_T0001809.1 MGP_NODShiLtJ_G0001722.1 mouse_genomes_project 5 149758060 149759810 - TEC TEC MGP_NODShiLtJ_T0073379.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132365887 132457833 + Cit protein_coding retained_intron MGP_NODShiLtJ_T0073380.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132365889 132398957 + MGP_NODShiLtJ_P0073380 Cit protein_coding protein_coding MGP_NODShiLtJ_T0073381.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132365890 132398975 + MGP_NODShiLtJ_P0073381 Cit protein_coding protein_coding MGP_NODShiLtJ_T0073382.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132366253 132457840 + Cit protein_coding retained_intron MGP_NODShiLtJ_T0073383.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132366253 132542781 + MGP_NODShiLtJ_P0073383 Cit protein_coding protein_coding MGP_NODShiLtJ_T0073384.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132366253 132546273 + MGP_NODShiLtJ_P0073384 Cit protein_coding protein_coding MGP_NODShiLtJ_T0073385.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132366980 132542756 + MGP_NODShiLtJ_P0073385 Cit protein_coding protein_coding MGP_NODShiLtJ_T0073386.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132366980 132542756 + MGP_NODShiLtJ_P0073386 Cit protein_coding protein_coding MGP_NODShiLtJ_T0073387.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132367070 132376739 + Cit protein_coding processed_transcript MGP_NODShiLtJ_T0073388.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132371643 132386870 + Cit protein_coding retained_intron MGP_NODShiLtJ_T0073389.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132415697 132416898 + Cit protein_coding retained_intron MGP_NODShiLtJ_T0073390.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132439762 132457650 + Cit protein_coding retained_intron MGP_NODShiLtJ_T0073391.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132439813 132542756 + MGP_NODShiLtJ_P0073391 Cit protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073392.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132457690 132543224 + Cit protein_coding processed_transcript MGP_NODShiLtJ_T0073393.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132458218 132542796 + Cit protein_coding processed_transcript MGP_NODShiLtJ_T0073394.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132465823 132479223 + Cit protein_coding processed_transcript MGP_NODShiLtJ_T0073395.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132477570 132534429 + Cit protein_coding retained_intron MGP_NODShiLtJ_T0073396.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132483379 132484939 + Cit protein_coding processed_transcript MGP_NODShiLtJ_T0073397.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132501732 132542793 + MGP_NODShiLtJ_P0073397 Cit protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073398.1 MGP_NODShiLtJ_G0029777.1 mouse_genomes_project 5 132521903 132525516 + Cit protein_coding retained_intron MGP_NODShiLtJ_T0014849.1 MGP_NODShiLtJ_G0012957.1 mouse_genomes_project 5 50863212 50864017 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099360.1 MGP_NODShiLtJ_G0037754.1 mouse_genomes_project 5 81000263 81000361 - Gm25768 snRNA snRNA MGP_NODShiLtJ_T0071478.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778179 72778836 - protein_coding retained_intron MGP_NODShiLtJ_T0071479.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778179 72788943 - MGP_NODShiLtJ_P0071479 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071480.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778179 72789115 - MGP_NODShiLtJ_P0071480 protein_coding protein_coding MGP_NODShiLtJ_T0071481.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778179 72789554 - MGP_NODShiLtJ_P0071481 protein_coding protein_coding MGP_NODShiLtJ_T0071482.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778180 72789508 - protein_coding retained_intron MGP_NODShiLtJ_T0071483.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778193 72789096 - MGP_NODShiLtJ_P0071483 protein_coding protein_coding MGP_NODShiLtJ_T0071484.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778329 72787483 - protein_coding retained_intron MGP_NODShiLtJ_T0071485.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778400 72789490 - MGP_NODShiLtJ_P0071485 protein_coding protein_coding MGP_NODShiLtJ_T0071486.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778422 72789557 - MGP_NODShiLtJ_P0071486 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0071487.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778598 72789491 - protein_coding retained_intron MGP_NODShiLtJ_T0071488.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72778838 72789101 - protein_coding retained_intron MGP_NODShiLtJ_T0071489.1 MGP_NODShiLtJ_G0029379.1 mouse_genomes_project 5 72787357 72789509 - MGP_NODShiLtJ_P0071489 protein_coding protein_coding MGP_NODShiLtJ_T0072455.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114840308 114857560 - Sec31a protein_coding retained_intron MGP_NODShiLtJ_T0072456.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114840308 114896032 - MGP_NODShiLtJ_P0072456 Sec31a protein_coding protein_coding MGP_NODShiLtJ_T0072457.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114840309 114852131 - MGP_NODShiLtJ_P0072457 Sec31a protein_coding protein_coding MGP_NODShiLtJ_T0072458.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114840313 114895973 - MGP_NODShiLtJ_P0072458 Sec31a protein_coding protein_coding MGP_NODShiLtJ_T0072459.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114840667 114874549 - MGP_NODShiLtJ_P0072459 Sec31a protein_coding protein_coding MGP_NODShiLtJ_T0072460.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114840805 114842930 - Sec31a protein_coding retained_intron MGP_NODShiLtJ_T0072461.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114840870 114861494 - MGP_NODShiLtJ_P0072461 Sec31a protein_coding protein_coding MGP_NODShiLtJ_T0072462.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114844413 114857646 - MGP_NODShiLtJ_P0072462 Sec31a protein_coding protein_coding MGP_NODShiLtJ_T0072463.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114861525 114871261 - MGP_NODShiLtJ_P0072463 Sec31a protein_coding protein_coding MGP_NODShiLtJ_T0072464.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114880105 114884234 - Sec31a protein_coding processed_transcript MGP_NODShiLtJ_T0072465.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114886344 114888275 - Sec31a protein_coding retained_intron MGP_NODShiLtJ_T0072466.1 MGP_NODShiLtJ_G0029586.1 mouse_genomes_project 5 114894063 114895964 - Sec31a protein_coding retained_intron MGP_NODShiLtJ_T0075481.1 MGP_NODShiLtJ_G0030162.1 mouse_genomes_project 5 164813515 164838474 - MGP_NODShiLtJ_P0075481 Ptcd1 protein_coding protein_coding MGP_NODShiLtJ_T0075482.1 MGP_NODShiLtJ_G0030162.1 mouse_genomes_project 5 164836813 164838322 - MGP_NODShiLtJ_P0075482 Ptcd1 protein_coding protein_coding MGP_NODShiLtJ_T0075369.1 MGP_NODShiLtJ_G0030141.1 mouse_genomes_project 5 163390022 163394600 - MGP_NODShiLtJ_P0075369 Ankrd61 protein_coding protein_coding MGP_NODShiLtJ_T0075370.1 MGP_NODShiLtJ_G0030141.1 mouse_genomes_project 5 163390022 163394563 - MGP_NODShiLtJ_P0075370 Ankrd61 protein_coding protein_coding MGP_NODShiLtJ_T0075371.1 MGP_NODShiLtJ_G0030141.1 mouse_genomes_project 5 163390024 163397239 - MGP_NODShiLtJ_P0075371 Ankrd61 protein_coding protein_coding MGP_NODShiLtJ_T0075525.1 MGP_NODShiLtJ_G0030176.1 mouse_genomes_project 5 166200916 166204371 - MGP_NODShiLtJ_P0075525 protein_coding protein_coding MGP_NODShiLtJ_T0075526.1 MGP_NODShiLtJ_G0030176.1 mouse_genomes_project 5 166200925 166202771 - protein_coding retained_intron MGP_NODShiLtJ_T0073569.1 MGP_NODShiLtJ_G0029815.1 mouse_genomes_project 5 137837571 137866584 - MGP_NODShiLtJ_P0073569 protein_coding protein_coding MGP_NODShiLtJ_T0073570.1 MGP_NODShiLtJ_G0029815.1 mouse_genomes_project 5 137844366 137866558 - MGP_NODShiLtJ_P0073570 protein_coding protein_coding MGP_NODShiLtJ_T0014794.1 MGP_NODShiLtJ_G0012902.1 mouse_genomes_project 5 26965936 26966868 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015033.1 MGP_NODShiLtJ_G0013141.1 mouse_genomes_project 5 140068215 140068614 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001539.1 MGP_NODShiLtJ_G0001455.1 mouse_genomes_project 5 52538819 52539451 - TEC TEC MGP_NODShiLtJ_T0014725.1 MGP_NODShiLtJ_G0012833.1 mouse_genomes_project 5 2763453 2763916 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071937.1 MGP_NODShiLtJ_G0029452.1 mouse_genomes_project 5 86000481 86030203 - MGP_NODShiLtJ_P0071937 Ppat protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071938.1 MGP_NODShiLtJ_G0029452.1 mouse_genomes_project 5 86000508 86030209 - MGP_NODShiLtJ_P0071938 Ppat protein_coding protein_coding MGP_NODShiLtJ_T0071939.1 MGP_NODShiLtJ_G0029452.1 mouse_genomes_project 5 86002276 86029796 - Ppat protein_coding retained_intron MGP_NODShiLtJ_T0004756.1 MGP_NODShiLtJ_G0004095.1 mouse_genomes_project 5 137786762 137853423 + antisense antisense MGP_NODShiLtJ_T0015045.1 MGP_NODShiLtJ_G0013153.1 mouse_genomes_project 5 154175465 154177336 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071259.1 MGP_NODShiLtJ_G0029340.1 mouse_genomes_project 5 48527467 48727960 - MGP_NODShiLtJ_P0071259 protein_coding protein_coding MGP_NODShiLtJ_T0071260.1 MGP_NODShiLtJ_G0029340.1 mouse_genomes_project 5 48527470 48727812 - MGP_NODShiLtJ_P0071260 protein_coding protein_coding MGP_NODShiLtJ_T0071261.1 MGP_NODShiLtJ_G0029340.1 mouse_genomes_project 5 48531322 48726929 - MGP_NODShiLtJ_P0071261 protein_coding protein_coding MGP_NODShiLtJ_T0071262.1 MGP_NODShiLtJ_G0029340.1 mouse_genomes_project 5 48532326 48557774 - protein_coding processed_transcript MGP_NODShiLtJ_T0071263.1 MGP_NODShiLtJ_G0029340.1 mouse_genomes_project 5 48553298 48562049 - protein_coding retained_intron MGP_NODShiLtJ_T0004734.1 MGP_NODShiLtJ_G0004081.1 mouse_genomes_project 5 132546659 132553135 + Gm14508 antisense antisense MGP_NODShiLtJ_T0001598.1 MGP_NODShiLtJ_G0001513.1 mouse_genomes_project 5 73046502 73049333 + TEC TEC MGP_NODShiLtJ_T0071304.1 MGP_NODShiLtJ_G0029344.1 mouse_genomes_project 5 53530467 53637051 - MGP_NODShiLtJ_P0071304 Adgra3 protein_coding protein_coding MGP_NODShiLtJ_T0071305.1 MGP_NODShiLtJ_G0029344.1 mouse_genomes_project 5 53536626 53542592 - Adgra3 protein_coding processed_transcript MGP_NODShiLtJ_T0071306.1 MGP_NODShiLtJ_G0029344.1 mouse_genomes_project 5 53558969 53573739 - Adgra3 protein_coding processed_transcript MGP_NODShiLtJ_T0071307.1 MGP_NODShiLtJ_G0029344.1 mouse_genomes_project 5 53581978 53589957 - Adgra3 protein_coding retained_intron MGP_NODShiLtJ_T0071308.1 MGP_NODShiLtJ_G0029344.1 mouse_genomes_project 5 53628113 53631430 - Adgra3 protein_coding retained_intron MGP_NODShiLtJ_T0071309.1 MGP_NODShiLtJ_G0029344.1 mouse_genomes_project 5 53628588 53636690 - Adgra3 protein_coding processed_transcript MGP_NODShiLtJ_T0071310.1 MGP_NODShiLtJ_G0029344.1 mouse_genomes_project 5 53636171 53636690 - Adgra3 protein_coding retained_intron MGP_NODShiLtJ_T0072239.1 MGP_NODShiLtJ_G0029542.1 mouse_genomes_project 5 105150867 105188858 - MGP_NODShiLtJ_P0072239 Cdkl2 protein_coding protein_coding MGP_NODShiLtJ_T0072240.1 MGP_NODShiLtJ_G0029542.1 mouse_genomes_project 5 105150867 105188859 - MGP_NODShiLtJ_P0072240 Cdkl2 protein_coding protein_coding MGP_NODShiLtJ_T0072241.1 MGP_NODShiLtJ_G0029542.1 mouse_genomes_project 5 105152597 105188513 - MGP_NODShiLtJ_P0072241 Cdkl2 protein_coding protein_coding MGP_NODShiLtJ_T0072242.1 MGP_NODShiLtJ_G0029542.1 mouse_genomes_project 5 105152616 105188489 - MGP_NODShiLtJ_P0072242 Cdkl2 protein_coding protein_coding MGP_NODShiLtJ_T0072243.1 MGP_NODShiLtJ_G0029542.1 mouse_genomes_project 5 105152829 105162208 - Cdkl2 protein_coding retained_intron MGP_NODShiLtJ_T0072244.1 MGP_NODShiLtJ_G0029542.1 mouse_genomes_project 5 105167754 105176217 - MGP_NODShiLtJ_P0072244 Cdkl2 protein_coding protein_coding MGP_NODShiLtJ_T0072245.1 MGP_NODShiLtJ_G0029542.1 mouse_genomes_project 5 105188083 105189700 - Cdkl2 protein_coding TEC MGP_NODShiLtJ_T0098395.1 MGP_NODShiLtJ_G0036800.1 mouse_genomes_project 5 24321022 24321830 - Gm43566 sense_intronic sense_intronic MGP_NODShiLtJ_T0072022.1 MGP_NODShiLtJ_G0029466.1 mouse_genomes_project 5 98118366 98176716 - MGP_NODShiLtJ_P0072022 Cenpc1 protein_coding protein_coding MGP_NODShiLtJ_T0072023.1 MGP_NODShiLtJ_G0029466.1 mouse_genomes_project 5 98151498 98176684 - Cenpc1 protein_coding retained_intron MGP_NODShiLtJ_T0072024.1 MGP_NODShiLtJ_G0029466.1 mouse_genomes_project 5 98151499 98176680 - Cenpc1 protein_coding retained_intron MGP_NODShiLtJ_T0072025.1 MGP_NODShiLtJ_G0029466.1 mouse_genomes_project 5 98164890 98176655 - Cenpc1 protein_coding retained_intron MGP_NODShiLtJ_T0014909.1 MGP_NODShiLtJ_G0013017.1 mouse_genomes_project 5 82195476 82198384 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014738.1 MGP_NODShiLtJ_G0012846.1 mouse_genomes_project 5 8642940 8644343 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008219.1 MGP_NODShiLtJ_G0006680.1 mouse_genomes_project 5 127851759 127865704 + Gm42487 lincRNA lincRNA MGP_NODShiLtJ_T0008220.1 MGP_NODShiLtJ_G0006680.1 mouse_genomes_project 5 127853587 127865621 + Gm42487 lincRNA lincRNA MGP_NODShiLtJ_T0004822.1 MGP_NODShiLtJ_G0004143.1 mouse_genomes_project 5 160958849 160973310 - Gm16036 antisense antisense MGP_NODShiLtJ_T0098415.1 MGP_NODShiLtJ_G0036819.1 mouse_genomes_project 5 152610914 152611330 - Gm43480 sense_intronic sense_intronic MGP_NODShiLtJ_T0004789.1 MGP_NODShiLtJ_G0004119.1 mouse_genomes_project 5 149769833 149781153 + 2810432F15Rik antisense antisense MGP_NODShiLtJ_T0072869.1 MGP_NODShiLtJ_G0029680.1 mouse_genomes_project 5 126046327 126070695 + MGP_NODShiLtJ_P0072869 Zfp605 protein_coding protein_coding MGP_NODShiLtJ_T0072870.1 MGP_NODShiLtJ_G0029680.1 mouse_genomes_project 5 126046571 126068360 + Zfp605 protein_coding processed_transcript MGP_NODShiLtJ_T0072871.1 MGP_NODShiLtJ_G0029680.1 mouse_genomes_project 5 126046586 126068318 + MGP_NODShiLtJ_P0072871 Zfp605 protein_coding protein_coding MGP_NODShiLtJ_T0072872.1 MGP_NODShiLtJ_G0029680.1 mouse_genomes_project 5 126048287 126070002 + MGP_NODShiLtJ_P0072872 Zfp605 protein_coding protein_coding MGP_NODShiLtJ_T0001572.1 MGP_NODShiLtJ_G0001488.1 mouse_genomes_project 5 63095864 63097811 + TEC TEC MGP_NODShiLtJ_T0072440.1 MGP_NODShiLtJ_G0029583.1 mouse_genomes_project 5 114459517 114462009 - Hnrnpdl protein_coding processed_transcript MGP_NODShiLtJ_T0072441.1 MGP_NODShiLtJ_G0029583.1 mouse_genomes_project 5 114459517 114465157 - MGP_NODShiLtJ_P0072441 Hnrnpdl protein_coding protein_coding MGP_NODShiLtJ_T0072442.1 MGP_NODShiLtJ_G0029583.1 mouse_genomes_project 5 114460661 114464804 - MGP_NODShiLtJ_P0072442 Hnrnpdl protein_coding protein_coding MGP_NODShiLtJ_T0072443.1 MGP_NODShiLtJ_G0029583.1 mouse_genomes_project 5 114460667 114465599 - MGP_NODShiLtJ_P0072443 Hnrnpdl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072444.1 MGP_NODShiLtJ_G0029583.1 mouse_genomes_project 5 114460768 114462666 - Hnrnpdl protein_coding retained_intron MGP_NODShiLtJ_T0072445.1 MGP_NODShiLtJ_G0029583.1 mouse_genomes_project 5 114461900 114463064 - Hnrnpdl protein_coding retained_intron MGP_NODShiLtJ_T0073284.1 MGP_NODShiLtJ_G0029760.1 mouse_genomes_project 5 131593918 131623428 - MGP_NODShiLtJ_P0073284 Cabp1 protein_coding protein_coding MGP_NODShiLtJ_T0073285.1 MGP_NODShiLtJ_G0029760.1 mouse_genomes_project 5 131593918 131615313 - MGP_NODShiLtJ_P0073285 Cabp1 protein_coding protein_coding MGP_NODShiLtJ_T0073286.1 MGP_NODShiLtJ_G0029760.1 mouse_genomes_project 5 131593942 131610398 - Cabp1 protein_coding processed_transcript MGP_NODShiLtJ_T0073287.1 MGP_NODShiLtJ_G0029760.1 mouse_genomes_project 5 131594174 131615126 - MGP_NODShiLtJ_P0073287 Cabp1 protein_coding protein_coding MGP_NODShiLtJ_T0073288.1 MGP_NODShiLtJ_G0029760.1 mouse_genomes_project 5 131594199 131615063 - MGP_NODShiLtJ_P0073288 Cabp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073289.1 MGP_NODShiLtJ_G0029760.1 mouse_genomes_project 5 131598131 131610235 - Cabp1 protein_coding retained_intron MGP_NODShiLtJ_T0073290.1 MGP_NODShiLtJ_G0029760.1 mouse_genomes_project 5 131607761 131613120 - Cabp1 protein_coding retained_intron MGP_NODShiLtJ_T0070131.1 MGP_NODShiLtJ_G0029147.1 mouse_genomes_project 5 25176998 25179395 - MGP_NODShiLtJ_P0070131 Tmub1 protein_coding protein_coding MGP_NODShiLtJ_T0070132.1 MGP_NODShiLtJ_G0029147.1 mouse_genomes_project 5 25177006 25179166 - MGP_NODShiLtJ_P0070132 Tmub1 protein_coding protein_coding MGP_NODShiLtJ_T0070133.1 MGP_NODShiLtJ_G0029147.1 mouse_genomes_project 5 25177006 25178858 - MGP_NODShiLtJ_P0070133 Tmub1 protein_coding protein_coding MGP_NODShiLtJ_T0070134.1 MGP_NODShiLtJ_G0029147.1 mouse_genomes_project 5 25177589 25179128 - MGP_NODShiLtJ_P0070134 Tmub1 protein_coding protein_coding MGP_NODShiLtJ_T0070135.1 MGP_NODShiLtJ_G0029147.1 mouse_genomes_project 5 25178093 25179332 - MGP_NODShiLtJ_P0070135 Tmub1 protein_coding protein_coding MGP_NODShiLtJ_T0018022.1 MGP_NODShiLtJ_G0015475.1 mouse_genomes_project 5 126096471 126106457 - Gm15787 processed_transcript antisense MGP_NODShiLtJ_T0018023.1 MGP_NODShiLtJ_G0015475.1 mouse_genomes_project 5 126097083 126120471 - Gm15787 processed_transcript processed_transcript MGP_NODShiLtJ_T0018024.1 MGP_NODShiLtJ_G0015475.1 mouse_genomes_project 5 126106467 126120410 - Gm15787 processed_transcript antisense MGP_NODShiLtJ_T0018025.1 MGP_NODShiLtJ_G0015475.1 mouse_genomes_project 5 126111569 126120471 - Gm15787 processed_transcript antisense MGP_NODShiLtJ_T0018026.1 MGP_NODShiLtJ_G0015475.1 mouse_genomes_project 5 126112256 126120433 - Gm15787 processed_transcript antisense MGP_NODShiLtJ_T0018027.1 MGP_NODShiLtJ_G0015475.1 mouse_genomes_project 5 126112318 126113958 - Gm15787 processed_transcript antisense MGP_NODShiLtJ_T0018028.1 MGP_NODShiLtJ_G0015475.1 mouse_genomes_project 5 126113659 126120471 - Gm15787 processed_transcript antisense MGP_NODShiLtJ_T0018029.1 MGP_NODShiLtJ_G0015475.1 mouse_genomes_project 5 126114182 126120407 - Gm15787 processed_transcript antisense MGP_NODShiLtJ_T0001556.1 MGP_NODShiLtJ_G0001472.1 mouse_genomes_project 5 55719932 55721162 - TEC TEC MGP_NODShiLtJ_T0073667.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 138983116 139036265 + Atxn2 protein_coding processed_transcript MGP_NODShiLtJ_T0073668.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 138993662 139108205 + MGP_NODShiLtJ_P0073668 Atxn2 protein_coding protein_coding MGP_NODShiLtJ_T0073669.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 138994853 139063859 + Atxn2 protein_coding processed_transcript MGP_NODShiLtJ_T0073670.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139036277 139108204 + MGP_NODShiLtJ_P0073670 Atxn2 protein_coding protein_coding MGP_NODShiLtJ_T0073671.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139069000 139086860 + MGP_NODShiLtJ_P0073671 Atxn2 protein_coding protein_coding MGP_NODShiLtJ_T0073672.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139070906 139074036 + Atxn2 protein_coding retained_intron MGP_NODShiLtJ_T0073673.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139074620 139107975 + MGP_NODShiLtJ_P0073673 Atxn2 protein_coding protein_coding MGP_NODShiLtJ_T0073674.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139075787 139087271 + Atxn2 protein_coding retained_intron MGP_NODShiLtJ_T0073675.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139089207 139096690 + Atxn2 protein_coding retained_intron MGP_NODShiLtJ_T0073676.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139093099 139095520 + Atxn2 protein_coding processed_transcript MGP_NODShiLtJ_T0073677.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139095000 139104206 + Atxn2 protein_coding retained_intron MGP_NODShiLtJ_T0073678.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139095365 139102311 + Atxn2 protein_coding retained_intron MGP_NODShiLtJ_T0073679.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139095484 139107886 + MGP_NODShiLtJ_P0073679 Atxn2 protein_coding protein_coding MGP_NODShiLtJ_T0073680.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139098833 139107989 + Atxn2 protein_coding retained_intron MGP_NODShiLtJ_T0073681.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139099499 139106710 + MGP_NODShiLtJ_P0073681 Atxn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073682.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139103918 139104788 + Atxn2 protein_coding retained_intron MGP_NODShiLtJ_T0073683.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139104219 139105185 + Atxn2 protein_coding retained_intron MGP_NODShiLtJ_T0073684.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139104714 139109748 + MGP_NODShiLtJ_P0073684 Atxn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073685.1 MGP_NODShiLtJ_G0029837.1 mouse_genomes_project 5 139104761 139108153 + MGP_NODShiLtJ_P0073685 Atxn2 protein_coding protein_coding MGP_NODShiLtJ_T0074342.1 MGP_NODShiLtJ_G0029945.1 mouse_genomes_project 5 148254628 148268020 + MGP_NODShiLtJ_P0074342 Tmem248 protein_coding protein_coding MGP_NODShiLtJ_T0074343.1 MGP_NODShiLtJ_G0029945.1 mouse_genomes_project 5 148257291 148270498 + MGP_NODShiLtJ_P0074343 Tmem248 protein_coding protein_coding MGP_NODShiLtJ_T0074344.1 MGP_NODShiLtJ_G0029945.1 mouse_genomes_project 5 148257291 148283516 + MGP_NODShiLtJ_P0074344 Tmem248 protein_coding protein_coding MGP_NODShiLtJ_T0074345.1 MGP_NODShiLtJ_G0029945.1 mouse_genomes_project 5 148257387 148270374 + MGP_NODShiLtJ_P0074345 Tmem248 protein_coding protein_coding MGP_NODShiLtJ_T0074346.1 MGP_NODShiLtJ_G0029945.1 mouse_genomes_project 5 148259882 148283417 + MGP_NODShiLtJ_P0074346 Tmem248 protein_coding protein_coding MGP_NODShiLtJ_T0008071.1 MGP_NODShiLtJ_G0006573.1 mouse_genomes_project 5 66030858 66066707 - lincRNA lincRNA MGP_NODShiLtJ_T0008072.1 MGP_NODShiLtJ_G0006573.1 mouse_genomes_project 5 66030863 66066701 - lincRNA lincRNA MGP_NODShiLtJ_T0074783.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155965014 155969018 + MGP_NODShiLtJ_P0074783 Ache protein_coding protein_coding MGP_NODShiLtJ_T0074784.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155965261 155969018 + MGP_NODShiLtJ_P0074784 Ache protein_coding protein_coding MGP_NODShiLtJ_T0074785.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155965261 155969018 + MGP_NODShiLtJ_P0074785 Ache protein_coding protein_coding MGP_NODShiLtJ_T0074786.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155965772 155973349 + MGP_NODShiLtJ_P0074786 Ache protein_coding protein_coding MGP_NODShiLtJ_T0074787.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155965778 155973344 + MGP_NODShiLtJ_P0074787 Ache protein_coding protein_coding MGP_NODShiLtJ_T0074788.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155965779 155973343 + MGP_NODShiLtJ_P0074788 Ache protein_coding protein_coding MGP_NODShiLtJ_T0074789.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155965780 155971212 + Ache protein_coding retained_intron MGP_NODShiLtJ_T0074790.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155967951 155969018 + MGP_NODShiLtJ_P0074790 Ache protein_coding protein_coding MGP_NODShiLtJ_T0074791.1 MGP_NODShiLtJ_G0030022.1 mouse_genomes_project 5 155968110 155969018 + MGP_NODShiLtJ_P0074791 Ache protein_coding protein_coding MGP_NODShiLtJ_T0001434.1 MGP_NODShiLtJ_G0001353.1 mouse_genomes_project 5 21145991 21146490 + TEC TEC MGP_NODShiLtJ_T0072996.1 MGP_NODShiLtJ_G0029702.1 mouse_genomes_project 5 128361342 128367365 - MGP_NODShiLtJ_P0072996 Cryba4 protein_coding protein_coding MGP_NODShiLtJ_T0072997.1 MGP_NODShiLtJ_G0029702.1 mouse_genomes_project 5 128361343 128366013 - MGP_NODShiLtJ_P0072997 Cryba4 protein_coding protein_coding MGP_NODShiLtJ_T0072998.1 MGP_NODShiLtJ_G0029702.1 mouse_genomes_project 5 128361382 128366653 - MGP_NODShiLtJ_P0072998 Cryba4 protein_coding protein_coding MGP_NODShiLtJ_T0001720.1 MGP_NODShiLtJ_G0001634.1 mouse_genomes_project 5 127448943 127451063 + TEC TEC MGP_NODShiLtJ_T0071203.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46682556 46797163 - MGP_NODShiLtJ_P0071203 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071204.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46682558 46695244 - MGP_NODShiLtJ_P0071204 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071205.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46682558 46796890 - MGP_NODShiLtJ_P0071205 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071206.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46682558 46797241 - MGP_NODShiLtJ_P0071206 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071207.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46682558 46794434 - MGP_NODShiLtJ_P0071207 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071208.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46682561 46789977 - MGP_NODShiLtJ_P0071208 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071209.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46682561 46789977 - MGP_NODShiLtJ_P0071209 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071210.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46691398 46794401 - MGP_NODShiLtJ_P0071210 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071211.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46691561 46789922 - MGP_NODShiLtJ_P0071211 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071212.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46691561 46789977 - MGP_NODShiLtJ_P0071212 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071213.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46691561 46789922 - MGP_NODShiLtJ_P0071213 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071214.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46702823 46725343 - Prom1 protein_coding retained_intron MGP_NODShiLtJ_T0071215.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46718592 46737695 - MGP_NODShiLtJ_P0071215 Prom1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071216.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46722002 46736769 - Prom1 protein_coding retained_intron MGP_NODShiLtJ_T0071217.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46736145 46797167 - Prom1 protein_coding retained_intron MGP_NODShiLtJ_T0071218.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46739714 46761766 - Prom1 protein_coding processed_transcript MGP_NODShiLtJ_T0071219.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46750337 46794395 - MGP_NODShiLtJ_P0071219 Prom1 protein_coding protein_coding MGP_NODShiLtJ_T0071220.1 MGP_NODShiLtJ_G0029331.1 mouse_genomes_project 5 46794863 46797167 - Prom1 protein_coding processed_transcript MGP_NODShiLtJ_T0014834.1 MGP_NODShiLtJ_G0012942.1 mouse_genomes_project 5 39213277 39213428 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008064.1 MGP_NODShiLtJ_G0006566.1 mouse_genomes_project 5 56464018 56475486 - 8030423F21Rik lincRNA lincRNA MGP_NODShiLtJ_T0001736.1 MGP_NODShiLtJ_G0001650.1 mouse_genomes_project 5 131887879 131890152 - TEC TEC MGP_NODShiLtJ_T0001564.1 MGP_NODShiLtJ_G0001480.1 mouse_genomes_project 5 57920923 57922694 + TEC TEC MGP_NODShiLtJ_T0073009.1 MGP_NODShiLtJ_G0029705.1 mouse_genomes_project 5 128449959 128461622 + MGP_NODShiLtJ_P0073009 Tfip11 protein_coding protein_coding MGP_NODShiLtJ_T0073010.1 MGP_NODShiLtJ_G0029705.1 mouse_genomes_project 5 128450022 128455508 + MGP_NODShiLtJ_P0073010 Tfip11 protein_coding protein_coding MGP_NODShiLtJ_T0073011.1 MGP_NODShiLtJ_G0029705.1 mouse_genomes_project 5 128450093 128451788 + MGP_NODShiLtJ_P0073011 Tfip11 protein_coding protein_coding MGP_NODShiLtJ_T0073012.1 MGP_NODShiLtJ_G0029705.1 mouse_genomes_project 5 128459191 128460822 + Tfip11 protein_coding retained_intron MGP_NODShiLtJ_T0015059.1 MGP_NODShiLtJ_G0013167.1 mouse_genomes_project 5 157608520 157609378 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099352.1 MGP_NODShiLtJ_G0037746.1 mouse_genomes_project 5 56187973 56188078 - Gm25601 snRNA snRNA MGP_NODShiLtJ_T0072312.1 MGP_NODShiLtJ_G0029553.1 mouse_genomes_project 5 105634229 105708479 - MGP_NODShiLtJ_P0072312 Scarb2 protein_coding protein_coding MGP_NODShiLtJ_T0072313.1 MGP_NODShiLtJ_G0029553.1 mouse_genomes_project 5 105707642 105709675 - Scarb2 protein_coding retained_intron MGP_NODShiLtJ_T0075452.1 MGP_NODShiLtJ_G0030158.1 mouse_genomes_project 5 164738464 164767020 + MGP_NODShiLtJ_P0075452 Arpc1a protein_coding protein_coding MGP_NODShiLtJ_T0075453.1 MGP_NODShiLtJ_G0030158.1 mouse_genomes_project 5 164738518 164752539 + Arpc1a protein_coding processed_transcript MGP_NODShiLtJ_T0075454.1 MGP_NODShiLtJ_G0030158.1 mouse_genomes_project 5 164738540 164767015 + MGP_NODShiLtJ_P0075454 Arpc1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075455.1 MGP_NODShiLtJ_G0030158.1 mouse_genomes_project 5 164738734 164753584 + MGP_NODShiLtJ_P0075455 Arpc1a protein_coding protein_coding MGP_NODShiLtJ_T0075456.1 MGP_NODShiLtJ_G0030158.1 mouse_genomes_project 5 164752612 164755281 + Arpc1a protein_coding retained_intron MGP_NODShiLtJ_T0075457.1 MGP_NODShiLtJ_G0030158.1 mouse_genomes_project 5 164762529 164766851 + Arpc1a protein_coding retained_intron MGP_NODShiLtJ_T0017983.1 MGP_NODShiLtJ_G0015459.1 mouse_genomes_project 5 32910875 33019287 + Gm43809 processed_transcript processed_transcript MGP_NODShiLtJ_T0017984.1 MGP_NODShiLtJ_G0015459.1 mouse_genomes_project 5 32927744 33019267 + Gm43809 processed_transcript processed_transcript MGP_NODShiLtJ_T0008109.1 MGP_NODShiLtJ_G0006602.1 mouse_genomes_project 5 85054385 85067605 + Gm32780 lincRNA lincRNA MGP_NODShiLtJ_T0014735.1 MGP_NODShiLtJ_G0012843.1 mouse_genomes_project 5 7565227 7566191 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001611.1 MGP_NODShiLtJ_G0001526.1 mouse_genomes_project 5 73704896 73707846 + TEC TEC MGP_NODShiLtJ_T0001777.1 MGP_NODShiLtJ_G0001691.1 mouse_genomes_project 5 140881380 140882247 + TEC TEC MGP_NODShiLtJ_T0004678.1 MGP_NODShiLtJ_G0004046.1 mouse_genomes_project 5 110732729 110736565 - Gm42604 antisense antisense MGP_NODShiLtJ_T0074765.1 MGP_NODShiLtJ_G0030016.1 mouse_genomes_project 5 155658796 155665765 + MGP_NODShiLtJ_P0074765 Vgf protein_coding protein_coding MGP_NODShiLtJ_T0074766.1 MGP_NODShiLtJ_G0030016.1 mouse_genomes_project 5 155662708 155665765 + MGP_NODShiLtJ_P0074766 Vgf protein_coding protein_coding MGP_NODShiLtJ_T0074767.1 MGP_NODShiLtJ_G0030016.1 mouse_genomes_project 5 155662777 155665442 + MGP_NODShiLtJ_P0074767 Vgf protein_coding protein_coding MGP_NODShiLtJ_T0074768.1 MGP_NODShiLtJ_G0030016.1 mouse_genomes_project 5 155663114 155663821 + MGP_NODShiLtJ_P0074768 Vgf protein_coding protein_coding MGP_NODShiLtJ_T0070453.1 MGP_NODShiLtJ_G0029211.1 mouse_genomes_project 5 32326948 32332670 + MGP_NODShiLtJ_P0070453 Dnajc5g protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070454.1 MGP_NODShiLtJ_G0029211.1 mouse_genomes_project 5 32328971 32332425 + MGP_NODShiLtJ_P0070454 Dnajc5g protein_coding protein_coding MGP_NODShiLtJ_T0070455.1 MGP_NODShiLtJ_G0029211.1 mouse_genomes_project 5 32328981 32332529 + MGP_NODShiLtJ_P0070455 Dnajc5g protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070456.1 MGP_NODShiLtJ_G0029211.1 mouse_genomes_project 5 32328983 32333212 + MGP_NODShiLtJ_P0070456 Dnajc5g protein_coding protein_coding MGP_NODShiLtJ_T0072413.1 MGP_NODShiLtJ_G0029578.1 mouse_genomes_project 5 113241089 113360260 - MGP_NODShiLtJ_P0072413 Prkg2 protein_coding protein_coding MGP_NODShiLtJ_T0072414.1 MGP_NODShiLtJ_G0029578.1 mouse_genomes_project 5 113242580 113255569 - MGP_NODShiLtJ_P0072414 Prkg2 protein_coding protein_coding MGP_NODShiLtJ_T0072415.1 MGP_NODShiLtJ_G0029578.1 mouse_genomes_project 5 113242580 113255567 - MGP_NODShiLtJ_P0072415 Prkg2 protein_coding protein_coding MGP_NODShiLtJ_T0072416.1 MGP_NODShiLtJ_G0029578.1 mouse_genomes_project 5 113243032 113359944 - MGP_NODShiLtJ_P0072416 Prkg2 protein_coding protein_coding MGP_NODShiLtJ_T0072417.1 MGP_NODShiLtJ_G0029578.1 mouse_genomes_project 5 113243322 113359964 - MGP_NODShiLtJ_P0072417 Prkg2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072418.1 MGP_NODShiLtJ_G0029578.1 mouse_genomes_project 5 113259121 113282877 - Prkg2 protein_coding retained_intron MGP_NODShiLtJ_T0008054.1 MGP_NODShiLtJ_G0006557.1 mouse_genomes_project 5 47618787 47630996 + Gm42750 lincRNA lincRNA MGP_NODShiLtJ_T0001453.1 MGP_NODShiLtJ_G0001371.1 mouse_genomes_project 5 32069110 32071175 - TEC TEC MGP_NODShiLtJ_T0004836.1 MGP_NODShiLtJ_G0004152.1 mouse_genomes_project 5 169827899 169829608 - Gm43151 antisense antisense MGP_NODShiLtJ_T0071774.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82080411 82102440 + MGP_NODShiLtJ_P0071774 Ociad1 protein_coding protein_coding MGP_NODShiLtJ_T0071775.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82080419 82102552 + MGP_NODShiLtJ_P0071775 Ociad1 protein_coding protein_coding MGP_NODShiLtJ_T0071776.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82080420 82098078 + MGP_NODShiLtJ_P0071776 Ociad1 protein_coding protein_coding MGP_NODShiLtJ_T0071777.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82080434 82095493 + MGP_NODShiLtJ_P0071777 Ociad1 protein_coding protein_coding MGP_NODShiLtJ_T0071778.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82080459 82102397 + MGP_NODShiLtJ_P0071778 Ociad1 protein_coding protein_coding MGP_NODShiLtJ_T0071779.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82080468 82099129 + MGP_NODShiLtJ_P0071779 Ociad1 protein_coding protein_coding MGP_NODShiLtJ_T0071780.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82080522 82102424 + MGP_NODShiLtJ_P0071780 Ociad1 protein_coding protein_coding MGP_NODShiLtJ_T0071781.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82080680 82082594 + MGP_NODShiLtJ_P0071781 Ociad1 protein_coding protein_coding MGP_NODShiLtJ_T0071782.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82082617 82102424 + MGP_NODShiLtJ_P0071782 Ociad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071783.1 MGP_NODShiLtJ_G0029425.1 mouse_genomes_project 5 82092834 82093867 + Ociad1 protein_coding retained_intron MGP_NODShiLtJ_T0014777.1 MGP_NODShiLtJ_G0012885.1 mouse_genomes_project 5 23504575 23505184 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001424.1 MGP_NODShiLtJ_G0001343.1 mouse_genomes_project 5 13768336 13777527 + TEC TEC MGP_NODShiLtJ_T0001608.1 MGP_NODShiLtJ_G0001523.1 mouse_genomes_project 5 73431944 73433503 + TEC TEC MGP_NODShiLtJ_T0004609.1 MGP_NODShiLtJ_G0003990.1 mouse_genomes_project 5 36455469 36485367 - Gm42560 antisense antisense MGP_NODShiLtJ_T0014988.1 MGP_NODShiLtJ_G0013096.1 mouse_genomes_project 5 122145230 122149541 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071871.1 MGP_NODShiLtJ_G0029442.1 mouse_genomes_project 5 84933923 84980837 - MGP_NODShiLtJ_P0071871 Kdr protein_coding protein_coding MGP_NODShiLtJ_T0071872.1 MGP_NODShiLtJ_G0029442.1 mouse_genomes_project 5 84959771 84980837 - Kdr protein_coding retained_intron MGP_NODShiLtJ_T0071873.1 MGP_NODShiLtJ_G0029442.1 mouse_genomes_project 5 84963650 84980837 - Kdr protein_coding retained_intron MGP_NODShiLtJ_T0101943.1 MGP_NODShiLtJ_G0040111.1 mouse_genomes_project 5 15187611 15188644 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0074908.1 MGP_NODShiLtJ_G0030043.1 mouse_genomes_project 5 156469694 156481121 - MGP_NODShiLtJ_P0074908 Nyap1 protein_coding protein_coding MGP_NODShiLtJ_T0074909.1 MGP_NODShiLtJ_G0030043.1 mouse_genomes_project 5 156470708 156482729 - MGP_NODShiLtJ_P0074909 Nyap1 protein_coding protein_coding MGP_NODShiLtJ_T0074910.1 MGP_NODShiLtJ_G0030043.1 mouse_genomes_project 5 156471511 156480841 - MGP_NODShiLtJ_P0074910 Nyap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0074911.1 MGP_NODShiLtJ_G0030043.1 mouse_genomes_project 5 156472766 156482224 - MGP_NODShiLtJ_P0074911 Nyap1 protein_coding protein_coding MGP_NODShiLtJ_T0001471.1 MGP_NODShiLtJ_G0001387.1 mouse_genomes_project 5 35376726 35381100 - TEC TEC MGP_NODShiLtJ_T0008065.1 MGP_NODShiLtJ_G0006567.1 mouse_genomes_project 5 56899591 56913284 + Gm42746 lincRNA lincRNA MGP_NODShiLtJ_T0075241.1 MGP_NODShiLtJ_G0030114.1 mouse_genomes_project 5 161879565 161882176 + MGP_NODShiLtJ_P0075241 Ap5z1 protein_coding protein_coding MGP_NODShiLtJ_T0075242.1 MGP_NODShiLtJ_G0030114.1 mouse_genomes_project 5 161879620 161888397 + Ap5z1 protein_coding processed_transcript MGP_NODShiLtJ_T0075243.1 MGP_NODShiLtJ_G0030114.1 mouse_genomes_project 5 161879665 161884593 + MGP_NODShiLtJ_P0075243 Ap5z1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075244.1 MGP_NODShiLtJ_G0030114.1 mouse_genomes_project 5 161879675 161894899 + MGP_NODShiLtJ_P0075244 Ap5z1 protein_coding protein_coding MGP_NODShiLtJ_T0075245.1 MGP_NODShiLtJ_G0030114.1 mouse_genomes_project 5 161879682 161893991 + Ap5z1 protein_coding retained_intron MGP_NODShiLtJ_T0075246.1 MGP_NODShiLtJ_G0030114.1 mouse_genomes_project 5 161879695 161894243 + MGP_NODShiLtJ_P0075246 Ap5z1 protein_coding protein_coding MGP_NODShiLtJ_T0075247.1 MGP_NODShiLtJ_G0030114.1 mouse_genomes_project 5 161890287 161891942 + Ap5z1 protein_coding retained_intron MGP_NODShiLtJ_T0075266.1 MGP_NODShiLtJ_G0030120.1 mouse_genomes_project 5 162167741 162246854 - MGP_NODShiLtJ_P0075266 protein_coding protein_coding MGP_NODShiLtJ_T0075267.1 MGP_NODShiLtJ_G0030120.1 mouse_genomes_project 5 162175187 162179713 - protein_coding processed_transcript MGP_NODShiLtJ_T0075268.1 MGP_NODShiLtJ_G0030120.1 mouse_genomes_project 5 162176042 162180256 - protein_coding retained_intron MGP_NODShiLtJ_T0075269.1 MGP_NODShiLtJ_G0030120.1 mouse_genomes_project 5 162201372 162278936 - MGP_NODShiLtJ_P0075269 protein_coding protein_coding MGP_NODShiLtJ_T0075270.1 MGP_NODShiLtJ_G0030120.1 mouse_genomes_project 5 162222691 162224399 - protein_coding retained_intron MGP_NODShiLtJ_T0075271.1 MGP_NODShiLtJ_G0030120.1 mouse_genomes_project 5 162246639 162258563 - protein_coding processed_transcript MGP_NODShiLtJ_T0075272.1 MGP_NODShiLtJ_G0030120.1 mouse_genomes_project 5 162251125 162278654 - MGP_NODShiLtJ_P0075272 protein_coding protein_coding MGP_NODShiLtJ_T0001722.1 MGP_NODShiLtJ_G0001636.1 mouse_genomes_project 5 128498987 128499354 - TEC TEC MGP_NODShiLtJ_T0004717.1 MGP_NODShiLtJ_G0004070.1 mouse_genomes_project 5 127410264 127411024 - Gm43118 antisense antisense MGP_NODShiLtJ_T0004724.1 MGP_NODShiLtJ_G0004074.1 mouse_genomes_project 5 130123754 130124270 + Gm17122 antisense antisense MGP_NODShiLtJ_T0070000.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22383400 22870716 - MGP_NODShiLtJ_P0070000 Reln protein_coding protein_coding MGP_NODShiLtJ_T0070001.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22383841 22395280 - Reln protein_coding processed_transcript MGP_NODShiLtJ_T0070002.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22384196 22870704 - MGP_NODShiLtJ_P0070002 Reln protein_coding protein_coding MGP_NODShiLtJ_T0070003.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22389056 22393230 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070004.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22394238 22398258 - Reln protein_coding processed_transcript MGP_NODShiLtJ_T0070005.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22394844 22395200 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070006.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22397935 22439976 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070007.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22487928 22524109 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070008.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22516885 22870704 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070009.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22563802 22565033 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070010.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22577152 22653336 - MGP_NODShiLtJ_P0070010 Reln protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070011.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22646180 22870704 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070012.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22689335 22870704 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070013.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22732550 22870704 - Reln protein_coding retained_intron MGP_NODShiLtJ_T0070014.1 MGP_NODShiLtJ_G0029127.1 mouse_genomes_project 5 22868084 22870716 - Reln protein_coding processed_transcript MGP_NODShiLtJ_T0001687.1 MGP_NODShiLtJ_G0001601.1 mouse_genomes_project 5 112196438 112198876 + TEC TEC MGP_NODShiLtJ_T0074701.1 MGP_NODShiLtJ_G0030006.1 mouse_genomes_project 5 154718523 154741408 - MGP_NODShiLtJ_P0074701 Prkrip1 protein_coding protein_coding MGP_NODShiLtJ_T0074702.1 MGP_NODShiLtJ_G0030006.1 mouse_genomes_project 5 154721473 154741355 - Prkrip1 protein_coding processed_transcript MGP_NODShiLtJ_T0074703.1 MGP_NODShiLtJ_G0030006.1 mouse_genomes_project 5 154721811 154740267 - MGP_NODShiLtJ_P0074703 Prkrip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074704.1 MGP_NODShiLtJ_G0030006.1 mouse_genomes_project 5 154721816 154741353 - MGP_NODShiLtJ_P0074704 Prkrip1 protein_coding protein_coding MGP_NODShiLtJ_T0073078.1 MGP_NODShiLtJ_G0029719.1 mouse_genomes_project 5 129734319 129737128 + Wscd2 protein_coding retained_intron MGP_NODShiLtJ_T0073079.1 MGP_NODShiLtJ_G0029719.1 mouse_genomes_project 5 129734433 129836202 + MGP_NODShiLtJ_P0073079 Wscd2 protein_coding protein_coding MGP_NODShiLtJ_T0073080.1 MGP_NODShiLtJ_G0029719.1 mouse_genomes_project 5 129734738 129793490 + Wscd2 protein_coding retained_intron MGP_NODShiLtJ_T0073081.1 MGP_NODShiLtJ_G0029719.1 mouse_genomes_project 5 129788890 129795415 + Wscd2 protein_coding retained_intron MGP_NODShiLtJ_T0073082.1 MGP_NODShiLtJ_G0029719.1 mouse_genomes_project 5 129810933 129836195 + Wscd2 protein_coding processed_transcript MGP_NODShiLtJ_T0073083.1 MGP_NODShiLtJ_G0029719.1 mouse_genomes_project 5 129819405 129822492 + Wscd2 protein_coding processed_transcript MGP_NODShiLtJ_T0018005.1 MGP_NODShiLtJ_G0015467.1 mouse_genomes_project 5 73206456 73211951 - processed_transcript antisense MGP_NODShiLtJ_T0018006.1 MGP_NODShiLtJ_G0015467.1 mouse_genomes_project 5 73206910 73211442 - processed_transcript antisense MGP_NODShiLtJ_T0018007.1 MGP_NODShiLtJ_G0015467.1 mouse_genomes_project 5 73207847 73213458 - processed_transcript retained_intron MGP_NODShiLtJ_T0011483.1 MGP_NODShiLtJ_G0009616.1 mouse_genomes_project 5 33203617 33203919 + Gm24436 misc_RNA misc_RNA MGP_NODShiLtJ_T0075586.1 MGP_NODShiLtJ_G0030194.1 mouse_genomes_project 5 167403715 167409588 + MGP_NODShiLtJ_P0075586 Pdx1 protein_coding protein_coding MGP_NODShiLtJ_T0075357.1 MGP_NODShiLtJ_G0030138.1 mouse_genomes_project 5 163157888 163162818 + Cyth3 protein_coding retained_intron MGP_NODShiLtJ_T0075358.1 MGP_NODShiLtJ_G0030138.1 mouse_genomes_project 5 163158027 163248430 + MGP_NODShiLtJ_P0075358 Cyth3 protein_coding protein_coding MGP_NODShiLtJ_T0075359.1 MGP_NODShiLtJ_G0030138.1 mouse_genomes_project 5 163169454 163230834 + MGP_NODShiLtJ_P0075359 Cyth3 protein_coding protein_coding MGP_NODShiLtJ_T0075360.1 MGP_NODShiLtJ_G0030138.1 mouse_genomes_project 5 163171739 163230736 + MGP_NODShiLtJ_P0075360 Cyth3 protein_coding protein_coding MGP_NODShiLtJ_T0073619.1 MGP_NODShiLtJ_G0029828.1 mouse_genomes_project 5 138653434 138731758 + MGP_NODShiLtJ_P0073619 Tmem116 protein_coding protein_coding MGP_NODShiLtJ_T0073620.1 MGP_NODShiLtJ_G0029828.1 mouse_genomes_project 5 138654116 138698847 + MGP_NODShiLtJ_P0073620 Tmem116 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073621.1 MGP_NODShiLtJ_G0029828.1 mouse_genomes_project 5 138654116 138699806 + MGP_NODShiLtJ_P0073621 Tmem116 protein_coding protein_coding MGP_NODShiLtJ_T0073622.1 MGP_NODShiLtJ_G0029828.1 mouse_genomes_project 5 138654166 138685222 + MGP_NODShiLtJ_P0073622 Tmem116 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073623.1 MGP_NODShiLtJ_G0029828.1 mouse_genomes_project 5 138654247 138685222 + Tmem116 protein_coding processed_transcript MGP_NODShiLtJ_T0073624.1 MGP_NODShiLtJ_G0029828.1 mouse_genomes_project 5 138665299 138699813 + MGP_NODShiLtJ_P0073624 Tmem116 protein_coding protein_coding MGP_NODShiLtJ_T0073625.1 MGP_NODShiLtJ_G0029828.1 mouse_genomes_project 5 138665299 138699786 + MGP_NODShiLtJ_P0073625 Tmem116 protein_coding protein_coding MGP_NODShiLtJ_T0073626.1 MGP_NODShiLtJ_G0029828.1 mouse_genomes_project 5 138665370 138698679 + MGP_NODShiLtJ_P0073626 Tmem116 protein_coding protein_coding MGP_NODShiLtJ_T0001734.1 MGP_NODShiLtJ_G0001648.1 mouse_genomes_project 5 131449282 131450597 + TEC TEC MGP_NODShiLtJ_T0001759.1 MGP_NODShiLtJ_G0001673.1 mouse_genomes_project 5 138354635 138357903 - TEC TEC MGP_NODShiLtJ_T0100649.1 MGP_NODShiLtJ_G0039043.1 mouse_genomes_project 5 171277400 171277519 - Gm26013 snoRNA snoRNA MGP_NODShiLtJ_T0001413.1 MGP_NODShiLtJ_G0001332.1 mouse_genomes_project 5 8938440 8942864 - TEC TEC MGP_NODShiLtJ_T0072809.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124077055 124091176 - Dgkq protein_coding retained_intron MGP_NODShiLtJ_T0072810.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124077055 124101678 - MGP_NODShiLtJ_P0072810 Dgkq protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072811.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124077055 124091176 - MGP_NODShiLtJ_P0072811 Dgkq protein_coding protein_coding MGP_NODShiLtJ_T0072812.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124077055 124091176 - MGP_NODShiLtJ_P0072812 Dgkq protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072813.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124077055 124091176 - MGP_NODShiLtJ_P0072813 Dgkq protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072814.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124077409 124091176 - Dgkq protein_coding retained_intron MGP_NODShiLtJ_T0072815.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124077409 124084012 - Dgkq protein_coding retained_intron MGP_NODShiLtJ_T0072816.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124077636 124080291 - Dgkq protein_coding retained_intron MGP_NODShiLtJ_T0072817.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124081220 124083856 - Dgkq protein_coding retained_intron MGP_NODShiLtJ_T0072818.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124083856 124085497 - Dgkq protein_coding retained_intron MGP_NODShiLtJ_T0072819.1 MGP_NODShiLtJ_G0029662.1 mouse_genomes_project 5 124084907 124086361 - Dgkq protein_coding retained_intron MGP_NODShiLtJ_T0101346.1 MGP_NODShiLtJ_G0039582.1 mouse_genomes_project 5 83258670 83261435 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0004575.1 MGP_NODShiLtJ_G0003961.1 mouse_genomes_project 5 6418001 6444961 - Gm5106 antisense antisense MGP_NODShiLtJ_T0071839.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83507529 83595734 - MGP_NODShiLtJ_P0071839 Lnx1 protein_coding protein_coding MGP_NODShiLtJ_T0071840.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83507529 83595733 - MGP_NODShiLtJ_P0071840 Lnx1 protein_coding protein_coding MGP_NODShiLtJ_T0071841.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83507529 83603550 - MGP_NODShiLtJ_P0071841 Lnx1 protein_coding protein_coding MGP_NODShiLtJ_T0071842.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83507761 83595719 - MGP_NODShiLtJ_P0071842 Lnx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071844.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83512186 83595661 - MGP_NODShiLtJ_P0071844 Lnx1 protein_coding protein_coding MGP_NODShiLtJ_T0071845.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83512186 83595734 - MGP_NODShiLtJ_P0071845 Lnx1 protein_coding protein_coding MGP_NODShiLtJ_T0071846.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83512186 83595490 - MGP_NODShiLtJ_P0071846 Lnx1 protein_coding protein_coding MGP_NODShiLtJ_T0071847.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83512186 83620652 - MGP_NODShiLtJ_P0071847 Lnx1 protein_coding protein_coding MGP_NODShiLtJ_T0071848.1 MGP_NODShiLtJ_G0029436.1 mouse_genomes_project 5 83512858 83539380 - MGP_NODShiLtJ_P0071848 Lnx1 protein_coding protein_coding MGP_NODShiLtJ_T0015027.1 MGP_NODShiLtJ_G0013135.1 mouse_genomes_project 5 137640913 137641124 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099397.1 MGP_NODShiLtJ_G0037791.1 mouse_genomes_project 5 142263665 142263763 - Gm24854 snRNA snRNA MGP_NODShiLtJ_T0072593.1 MGP_NODShiLtJ_G0029612.1 mouse_genomes_project 5 118971119 118987548 + MGP_NODShiLtJ_P0072593 Dmp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0017989.1 MGP_NODShiLtJ_G0015462.1 mouse_genomes_project 5 54071657 54177054 - Gm36814 processed_transcript lincRNA MGP_NODShiLtJ_T0017990.1 MGP_NODShiLtJ_G0015462.1 mouse_genomes_project 5 54159745 54176079 - Gm36814 processed_transcript retained_intron MGP_NODShiLtJ_T0074000.1 MGP_NODShiLtJ_G0029884.1 mouse_genomes_project 5 141465715 141508080 + MGP_NODShiLtJ_P0074000 Ccdc62 protein_coding protein_coding MGP_NODShiLtJ_T0074001.1 MGP_NODShiLtJ_G0029884.1 mouse_genomes_project 5 141465725 141474541 + Ccdc62 protein_coding retained_intron MGP_NODShiLtJ_T0074002.1 MGP_NODShiLtJ_G0029884.1 mouse_genomes_project 5 141465725 141508080 + MGP_NODShiLtJ_P0074002 Ccdc62 protein_coding protein_coding MGP_NODShiLtJ_T0074003.1 MGP_NODShiLtJ_G0029884.1 mouse_genomes_project 5 141465735 141507113 + MGP_NODShiLtJ_P0074003 Ccdc62 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0074004.1 MGP_NODShiLtJ_G0029884.1 mouse_genomes_project 5 141483643 141491786 + Ccdc62 protein_coding processed_transcript MGP_NODShiLtJ_T0074005.1 MGP_NODShiLtJ_G0029884.1 mouse_genomes_project 5 141491763 141494868 + Ccdc62 protein_coding retained_intron MGP_NODShiLtJ_T0074006.1 MGP_NODShiLtJ_G0029884.1 mouse_genomes_project 5 141499893 141504354 + Ccdc62 protein_coding retained_intron MGP_NODShiLtJ_T0001507.1 MGP_NODShiLtJ_G0001423.1 mouse_genomes_project 5 47413985 47418447 - TEC TEC MGP_NODShiLtJ_T0001441.1 MGP_NODShiLtJ_G0001360.1 mouse_genomes_project 5 24870475 24873066 + TEC TEC MGP_NODShiLtJ_T0008022.1 MGP_NODShiLtJ_G0006537.1 mouse_genomes_project 5 37195605 37201524 + 4930478P22Rik lincRNA lincRNA MGP_NODShiLtJ_T0008023.1 MGP_NODShiLtJ_G0006537.1 mouse_genomes_project 5 37195617 37201761 + 4930478P22Rik lincRNA lincRNA MGP_NODShiLtJ_T0008024.1 MGP_NODShiLtJ_G0006537.1 mouse_genomes_project 5 37195623 37200986 + 4930478P22Rik lincRNA lincRNA MGP_NODShiLtJ_T0098414.1 MGP_NODShiLtJ_G0036818.1 mouse_genomes_project 5 149255803 149260511 - Gm43166 sense_intronic sense_intronic MGP_NODShiLtJ_T0015036.1 MGP_NODShiLtJ_G0013144.1 mouse_genomes_project 5 142065171 142065535 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004840.1 MGP_NODShiLtJ_G0004156.1 mouse_genomes_project 5 170790424 170806858 - Gm42556 antisense antisense MGP_NODShiLtJ_T0010635.1 MGP_NODShiLtJ_G0008768.1 mouse_genomes_project 5 164505301 164505386 - Mir7039 miRNA miRNA MGP_NODShiLtJ_T0071194.1 MGP_NODShiLtJ_G0029328.1 mouse_genomes_project 5 46475880 46484501 + MGP_NODShiLtJ_P0071194 Bst1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071195.1 MGP_NODShiLtJ_G0029328.1 mouse_genomes_project 5 46475886 46496050 + MGP_NODShiLtJ_P0071195 Bst1 protein_coding protein_coding MGP_NODShiLtJ_T0071196.1 MGP_NODShiLtJ_G0029328.1 mouse_genomes_project 5 46479732 46495530 + Bst1 protein_coding retained_intron MGP_NODShiLtJ_T0071197.1 MGP_NODShiLtJ_G0029328.1 mouse_genomes_project 5 46489177 46494474 + Bst1 protein_coding retained_intron MGP_NODShiLtJ_T0098416.1 MGP_NODShiLtJ_G0036820.1 mouse_genomes_project 5 155470777 155477592 - Gm20485 sense_intronic sense_intronic MGP_NODShiLtJ_T0014888.1 MGP_NODShiLtJ_G0012996.1 mouse_genomes_project 5 71458223 71459175 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004576.1 MGP_NODShiLtJ_G0003962.1 mouse_genomes_project 5 13150346 13169224 - Gm4128 antisense antisense MGP_NODShiLtJ_T0071784.1 MGP_NODShiLtJ_G0029426.1 mouse_genomes_project 5 82110680 82127238 - MGP_NODShiLtJ_P0071784 Ociad2 protein_coding protein_coding MGP_NODShiLtJ_T0071785.1 MGP_NODShiLtJ_G0029426.1 mouse_genomes_project 5 82110682 82127327 - MGP_NODShiLtJ_P0071785 Ociad2 protein_coding protein_coding MGP_NODShiLtJ_T0071786.1 MGP_NODShiLtJ_G0029426.1 mouse_genomes_project 5 82110682 82127324 - MGP_NODShiLtJ_P0071786 Ociad2 protein_coding protein_coding MGP_NODShiLtJ_T0071787.1 MGP_NODShiLtJ_G0029426.1 mouse_genomes_project 5 82111815 82126934 - MGP_NODShiLtJ_P0071787 Ociad2 protein_coding protein_coding MGP_NODShiLtJ_T0071788.1 MGP_NODShiLtJ_G0029426.1 mouse_genomes_project 5 82116188 82131626 - MGP_NODShiLtJ_P0071788 Ociad2 protein_coding protein_coding MGP_NODShiLtJ_T0071519.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73030771 73135863 - MGP_NODShiLtJ_P0071519 Pds5a protein_coding protein_coding MGP_NODShiLtJ_T0071520.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73030773 73041326 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071521.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73032819 73050194 - MGP_NODShiLtJ_P0071521 Pds5a protein_coding protein_coding MGP_NODShiLtJ_T0071522.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73036103 73135745 - MGP_NODShiLtJ_P0071522 Pds5a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0071523.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73044813 73135551 - MGP_NODShiLtJ_P0071523 Pds5a protein_coding protein_coding MGP_NODShiLtJ_T0071524.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73044969 73052142 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071525.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73052463 73085817 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071526.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73052478 73062639 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071527.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73052939 73063657 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071528.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73053895 73064088 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071529.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73073141 73074316 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071530.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73077481 73080502 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071531.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73081359 73135968 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071532.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73089474 73090624 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0071533.1 MGP_NODShiLtJ_G0029385.1 mouse_genomes_project 5 73103054 73134560 - Pds5a protein_coding retained_intron MGP_NODShiLtJ_T0073027.1 MGP_NODShiLtJ_G0029709.1 mouse_genomes_project 5 128510789 128530736 - MGP_NODShiLtJ_P0073027 Asphd2 protein_coding protein_coding MGP_NODShiLtJ_T0073028.1 MGP_NODShiLtJ_G0029709.1 mouse_genomes_project 5 128511879 128525923 - Asphd2 protein_coding processed_transcript MGP_NODShiLtJ_T0073029.1 MGP_NODShiLtJ_G0029709.1 mouse_genomes_project 5 128530021 128532547 - MGP_NODShiLtJ_P0073029 Asphd2 protein_coding protein_coding MGP_NODShiLtJ_T0073030.1 MGP_NODShiLtJ_G0029709.1 mouse_genomes_project 5 128530210 128533390 - MGP_NODShiLtJ_P0073030 Asphd2 protein_coding protein_coding MGP_NODShiLtJ_T0073031.1 MGP_NODShiLtJ_G0029709.1 mouse_genomes_project 5 128530298 128532481 - MGP_NODShiLtJ_P0073031 Asphd2 protein_coding protein_coding MGP_NODShiLtJ_T0073032.1 MGP_NODShiLtJ_G0029709.1 mouse_genomes_project 5 128530333 128532825 - MGP_NODShiLtJ_P0073032 Asphd2 protein_coding protein_coding MGP_NODShiLtJ_T0073033.1 MGP_NODShiLtJ_G0029709.1 mouse_genomes_project 5 128530403 128532453 - MGP_NODShiLtJ_P0073033 Asphd2 protein_coding protein_coding MGP_NODShiLtJ_T0001596.1 MGP_NODShiLtJ_G0001511.1 mouse_genomes_project 5 72942188 72946177 - TEC TEC MGP_NODShiLtJ_T0008164.1 MGP_NODShiLtJ_G0006645.1 mouse_genomes_project 5 116194595 116197572 + Gm20484 lincRNA lincRNA MGP_NODShiLtJ_T0070486.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32423434 32430469 - MGP_NODShiLtJ_P0070486 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0070487.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32423435 32430178 - MGP_NODShiLtJ_P0070487 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0070488.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32423443 32430047 - MGP_NODShiLtJ_P0070488 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0070489.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32423444 32430053 - MGP_NODShiLtJ_P0070489 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0070490.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32423445 32428686 - MGP_NODShiLtJ_P0070490 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0070491.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32426440 32427900 - Eif2b4 protein_coding retained_intron MGP_NODShiLtJ_T0070492.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32426607 32426955 - MGP_NODShiLtJ_P0070492 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0070493.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32426627 32428190 - MGP_NODShiLtJ_P0070493 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0070494.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32427436 32428238 - MGP_NODShiLtJ_P0070494 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0070495.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32428238 32430178 - Eif2b4 protein_coding processed_transcript MGP_NODShiLtJ_T0070496.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32428368 32430038 - Eif2b4 protein_coding retained_intron MGP_NODShiLtJ_T0070497.1 MGP_NODShiLtJ_G0029217.1 mouse_genomes_project 5 32428756 32430457 - MGP_NODShiLtJ_P0070497 Eif2b4 protein_coding protein_coding MGP_NODShiLtJ_T0075784.1 MGP_NODShiLtJ_G0030226.1 mouse_genomes_project 5 172292615 172301097 - MGP_NODShiLtJ_P0075784 Rfc3 protein_coding protein_coding MGP_NODShiLtJ_T0075785.1 MGP_NODShiLtJ_G0030226.1 mouse_genomes_project 5 172292678 172293993 - Rfc3 protein_coding retained_intron MGP_NODShiLtJ_T0075786.1 MGP_NODShiLtJ_G0030226.1 mouse_genomes_project 5 172292680 172294622 - Rfc3 protein_coding retained_intron MGP_NODShiLtJ_T0075787.1 MGP_NODShiLtJ_G0030226.1 mouse_genomes_project 5 172292683 172301057 - Rfc3 protein_coding retained_intron MGP_NODShiLtJ_T0075788.1 MGP_NODShiLtJ_G0030226.1 mouse_genomes_project 5 172294276 172301063 - Rfc3 protein_coding retained_intron MGP_NODShiLtJ_T0075789.1 MGP_NODShiLtJ_G0030226.1 mouse_genomes_project 5 172296828 172301050 - Rfc3 protein_coding retained_intron MGP_NODShiLtJ_T0075790.1 MGP_NODShiLtJ_G0030226.1 mouse_genomes_project 5 172299425 172301082 - Rfc3 protein_coding retained_intron MGP_NODShiLtJ_T0070025.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24066840 24143306 + MGP_NODShiLtJ_P0070025 protein_coding protein_coding MGP_NODShiLtJ_T0070026.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24066840 24123580 + MGP_NODShiLtJ_P0070026 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070027.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24066848 24143306 + MGP_NODShiLtJ_P0070027 protein_coding protein_coding MGP_NODShiLtJ_T0070028.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24113730 24122631 + protein_coding processed_transcript MGP_NODShiLtJ_T0070029.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24122680 24132892 + MGP_NODShiLtJ_P0070029 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070030.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24122728 24141934 + MGP_NODShiLtJ_P0070030 protein_coding protein_coding MGP_NODShiLtJ_T0070031.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24129562 24137188 + MGP_NODShiLtJ_P0070031 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070032.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24130099 24133042 + protein_coding retained_intron MGP_NODShiLtJ_T0070033.1 MGP_NODShiLtJ_G0029131.1 mouse_genomes_project 5 24134955 24137231 + MGP_NODShiLtJ_P0070033 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073924.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141017707 141030098 - MGP_NODShiLtJ_P0073924 Diablo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073925.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141018084 141031385 - MGP_NODShiLtJ_P0073925 Diablo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073926.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141018514 141030076 - MGP_NODShiLtJ_P0073926 Diablo protein_coding protein_coding MGP_NODShiLtJ_T0073927.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141021813 141030092 - MGP_NODShiLtJ_P0073927 Diablo protein_coding protein_coding MGP_NODShiLtJ_T0073928.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141022268 141030089 - MGP_NODShiLtJ_P0073928 Diablo protein_coding protein_coding MGP_NODShiLtJ_T0073929.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141023590 141030089 - MGP_NODShiLtJ_P0073929 Diablo protein_coding protein_coding MGP_NODShiLtJ_T0073930.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141023941 141029447 - Diablo protein_coding retained_intron MGP_NODShiLtJ_T0073931.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141024042 141026758 - Diablo protein_coding retained_intron MGP_NODShiLtJ_T0073932.1 MGP_NODShiLtJ_G0029874.1 mouse_genomes_project 5 141030451 141031444 - Diablo protein_coding processed_transcript MGP_NODShiLtJ_T0001449.1 MGP_NODShiLtJ_G0001367.1 mouse_genomes_project 5 29203667 29204032 - TEC TEC MGP_NODShiLtJ_T0004776.1 MGP_NODShiLtJ_G0004109.1 mouse_genomes_project 5 141795766 141803172 + Pitpnm2os1 antisense antisense MGP_NODShiLtJ_T0073088.1 MGP_NODShiLtJ_G0029721.1 mouse_genomes_project 5 129948013 129982841 - MGP_NODShiLtJ_P0073088 1700069L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0073089.1 MGP_NODShiLtJ_G0029721.1 mouse_genomes_project 5 129955869 129959945 - 1700069L16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0073090.1 MGP_NODShiLtJ_G0029721.1 mouse_genomes_project 5 129959204 129982818 - MGP_NODShiLtJ_P0073090 1700069L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0071383.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57801492 57841781 + MGP_NODShiLtJ_P0071383 Tbc1d19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071384.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57801513 57905849 + MGP_NODShiLtJ_P0071384 Tbc1d19 protein_coding protein_coding MGP_NODShiLtJ_T0071385.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57801534 57829947 + Tbc1d19 protein_coding processed_transcript MGP_NODShiLtJ_T0071386.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57801535 57824253 + Tbc1d19 protein_coding retained_intron MGP_NODShiLtJ_T0071387.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57801540 57905847 + MGP_NODShiLtJ_P0071387 Tbc1d19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071388.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57801565 57831486 + MGP_NODShiLtJ_P0071388 Tbc1d19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071389.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57826083 57831428 + Tbc1d19 protein_coding retained_intron MGP_NODShiLtJ_T0071390.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57829936 57845442 + Tbc1d19 protein_coding processed_transcript MGP_NODShiLtJ_T0071391.1 MGP_NODShiLtJ_G0029359.1 mouse_genomes_project 5 57892983 57905622 + Tbc1d19 protein_coding processed_transcript MGP_NODShiLtJ_T0072111.1 MGP_NODShiLtJ_G0029498.1 mouse_genomes_project 5 100651137 100662921 + MGP_NODShiLtJ_P0072111 2310003L06Rik protein_coding protein_coding MGP_NODShiLtJ_T0004624.1 MGP_NODShiLtJ_G0004001.1 mouse_genomes_project 5 46586884 46587555 - Gm16015 antisense antisense MGP_NODShiLtJ_T0073545.1 MGP_NODShiLtJ_G0029809.1 mouse_genomes_project 5 137610744 137627703 + MGP_NODShiLtJ_P0073545 Ddx54 protein_coding protein_coding MGP_NODShiLtJ_T0073546.1 MGP_NODShiLtJ_G0029809.1 mouse_genomes_project 5 137611132 137626738 + Ddx54 protein_coding retained_intron MGP_NODShiLtJ_T0073547.1 MGP_NODShiLtJ_G0029809.1 mouse_genomes_project 5 137618014 137620909 + Ddx54 protein_coding retained_intron MGP_NODShiLtJ_T0073548.1 MGP_NODShiLtJ_G0029809.1 mouse_genomes_project 5 137620437 137620908 + Ddx54 protein_coding retained_intron MGP_NODShiLtJ_T0008185.1 MGP_NODShiLtJ_G0006660.1 mouse_genomes_project 5 121567189 121568996 + Gm42916 lincRNA lincRNA MGP_NODShiLtJ_T0001491.1 MGP_NODShiLtJ_G0001407.1 mouse_genomes_project 5 46208351 46210457 + TEC TEC MGP_NODShiLtJ_T0072100.1 MGP_NODShiLtJ_G0029494.1 mouse_genomes_project 5 100380175 100409263 + MGP_NODShiLtJ_P0072100 Csn1s2b protein_coding protein_coding MGP_NODShiLtJ_T0072101.1 MGP_NODShiLtJ_G0029494.1 mouse_genomes_project 5 100380217 100397614 + MGP_NODShiLtJ_P0072101 Csn1s2b protein_coding protein_coding MGP_NODShiLtJ_T0072102.1 MGP_NODShiLtJ_G0029494.1 mouse_genomes_project 5 100380220 100409158 + MGP_NODShiLtJ_P0072102 Csn1s2b protein_coding protein_coding MGP_NODShiLtJ_T0075192.1 MGP_NODShiLtJ_G0030102.1 mouse_genomes_project 5 159663602 159688887 + MGP_NODShiLtJ_P0075192 Eif3b protein_coding protein_coding MGP_NODShiLtJ_T0075193.1 MGP_NODShiLtJ_G0030102.1 mouse_genomes_project 5 159671365 159674947 + Eif3b protein_coding retained_intron MGP_NODShiLtJ_T0075194.1 MGP_NODShiLtJ_G0030102.1 mouse_genomes_project 5 159684564 159688224 + MGP_NODShiLtJ_P0075194 Eif3b protein_coding protein_coding MGP_NODShiLtJ_T0015071.1 MGP_NODShiLtJ_G0013179.1 mouse_genomes_project 5 162948463 162953985 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004837.1 MGP_NODShiLtJ_G0004153.1 mouse_genomes_project 5 169830159 169833474 - Gm43150 antisense antisense MGP_NODShiLtJ_T0072237.1 MGP_NODShiLtJ_G0029541.1 mouse_genomes_project 5 105130472 105135129 + Gm1045 protein_coding retained_intron MGP_NODShiLtJ_T0072238.1 MGP_NODShiLtJ_G0029541.1 mouse_genomes_project 5 105130472 105140150 + MGP_NODShiLtJ_P0072238 Gm1045 protein_coding protein_coding MGP_NODShiLtJ_T0001762.1 MGP_NODShiLtJ_G0001676.1 mouse_genomes_project 5 138809735 138811949 + TEC TEC MGP_NODShiLtJ_T0015086.1 MGP_NODShiLtJ_G0013194.1 mouse_genomes_project 5 165912691 165912892 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071757.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81786719 81849970 - Fryl protein_coding retained_intron MGP_NODShiLtJ_T0071758.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81786719 81930215 - MGP_NODShiLtJ_P0071758 Fryl protein_coding protein_coding MGP_NODShiLtJ_T0071759.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81787463 81934202 - MGP_NODShiLtJ_P0071759 Fryl protein_coding protein_coding MGP_NODShiLtJ_T0071760.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81814584 81868181 - MGP_NODShiLtJ_P0071760 Fryl protein_coding protein_coding MGP_NODShiLtJ_T0071761.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81820605 81823599 - Fryl protein_coding retained_intron MGP_NODShiLtJ_T0071762.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81820708 81863053 - Fryl protein_coding processed_transcript MGP_NODShiLtJ_T0071763.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81826968 81827899 - Fryl protein_coding retained_intron MGP_NODShiLtJ_T0071764.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81840108 81840988 - Fryl protein_coding retained_intron MGP_NODShiLtJ_T0071765.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81841178 81849692 - MGP_NODShiLtJ_P0071765 Fryl protein_coding protein_coding MGP_NODShiLtJ_T0071766.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81852242 81855357 - Fryl protein_coding retained_intron MGP_NODShiLtJ_T0071767.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81878202 81879196 - MGP_NODShiLtJ_P0071767 Fryl protein_coding protein_coding MGP_NODShiLtJ_T0071768.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81880330 81950812 - Fryl protein_coding retained_intron MGP_NODShiLtJ_T0071769.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81889318 81900615 - MGP_NODShiLtJ_P0071769 Fryl protein_coding protein_coding MGP_NODShiLtJ_T0071770.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81899114 81903011 - MGP_NODShiLtJ_P0071770 Fryl protein_coding protein_coding MGP_NODShiLtJ_T0071771.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81900025 82043618 - Fryl protein_coding retained_intron MGP_NODShiLtJ_T0071772.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81930116 81975072 - MGP_NODShiLtJ_P0071772 Fryl protein_coding protein_coding MGP_NODShiLtJ_T0071773.1 MGP_NODShiLtJ_G0029424.1 mouse_genomes_project 5 81977020 82043782 - Fryl protein_coding retained_intron MGP_NODShiLtJ_T0071221.1 MGP_NODShiLtJ_G0029332.1 mouse_genomes_project 5 46865822 46918129 - MGP_NODShiLtJ_P0071221 Tapt1 protein_coding protein_coding MGP_NODShiLtJ_T0071222.1 MGP_NODShiLtJ_G0029332.1 mouse_genomes_project 5 46865827 46918124 - MGP_NODShiLtJ_P0071222 Tapt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071223.1 MGP_NODShiLtJ_G0029332.1 mouse_genomes_project 5 46867164 46873485 - Tapt1 protein_coding retained_intron MGP_NODShiLtJ_T0071224.1 MGP_NODShiLtJ_G0029332.1 mouse_genomes_project 5 46874891 46882771 - Tapt1 protein_coding retained_intron MGP_NODShiLtJ_T0071225.1 MGP_NODShiLtJ_G0029332.1 mouse_genomes_project 5 46879340 46909709 - MGP_NODShiLtJ_P0071225 Tapt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071226.1 MGP_NODShiLtJ_G0029332.1 mouse_genomes_project 5 46879355 46895894 - Tapt1 protein_coding retained_intron MGP_NODShiLtJ_T0071227.1 MGP_NODShiLtJ_G0029332.1 mouse_genomes_project 5 46883055 46896064 - Tapt1 protein_coding retained_intron MGP_NODShiLtJ_T0071228.1 MGP_NODShiLtJ_G0029332.1 mouse_genomes_project 5 46909325 46918133 - Tapt1 protein_coding retained_intron MGP_NODShiLtJ_T0075529.1 MGP_NODShiLtJ_G0030179.1 mouse_genomes_project 5 166201111 166204376 - MGP_NODShiLtJ_P0075529 protein_coding protein_coding MGP_NODShiLtJ_T0014748.1 MGP_NODShiLtJ_G0012856.1 mouse_genomes_project 5 15284649 15284893 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075483.1 MGP_NODShiLtJ_G0030163.1 mouse_genomes_project 5 164838578 164853414 + MGP_NODShiLtJ_P0075483 Cpsf4 protein_coding protein_coding MGP_NODShiLtJ_T0075484.1 MGP_NODShiLtJ_G0030163.1 mouse_genomes_project 5 164838589 164853414 + MGP_NODShiLtJ_P0075484 Cpsf4 protein_coding protein_coding MGP_NODShiLtJ_T0075485.1 MGP_NODShiLtJ_G0030163.1 mouse_genomes_project 5 164838612 164853413 + MGP_NODShiLtJ_P0075485 Cpsf4 protein_coding protein_coding MGP_NODShiLtJ_T0075486.1 MGP_NODShiLtJ_G0030163.1 mouse_genomes_project 5 164838619 164853126 + MGP_NODShiLtJ_P0075486 Cpsf4 protein_coding protein_coding MGP_NODShiLtJ_T0075487.1 MGP_NODShiLtJ_G0030163.1 mouse_genomes_project 5 164838633 164852605 + MGP_NODShiLtJ_P0075487 Cpsf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075488.1 MGP_NODShiLtJ_G0030163.1 mouse_genomes_project 5 164838820 164852726 + MGP_NODShiLtJ_P0075488 Cpsf4 protein_coding protein_coding MGP_NODShiLtJ_T0075489.1 MGP_NODShiLtJ_G0030163.1 mouse_genomes_project 5 164841916 164853414 + Cpsf4 protein_coding retained_intron MGP_NODShiLtJ_T0100600.1 MGP_NODShiLtJ_G0038994.1 mouse_genomes_project 5 18911254 18911382 + Gm23822 snoRNA snoRNA MGP_NODShiLtJ_T0099386.1 MGP_NODShiLtJ_G0037780.1 mouse_genomes_project 5 126757595 126757702 + Gm22583 snRNA snRNA MGP_NODShiLtJ_T0070103.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25153993 25157693 + MGP_NODShiLtJ_P0070103 Slc4a2 protein_coding protein_coding MGP_NODShiLtJ_T0070104.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25154009 25161691 + Slc4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0070105.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25154015 25161424 + MGP_NODShiLtJ_P0070105 Slc4a2 protein_coding protein_coding MGP_NODShiLtJ_T0070106.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25155388 25172491 + MGP_NODShiLtJ_P0070106 Slc4a2 protein_coding protein_coding MGP_NODShiLtJ_T0070107.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25156911 25161394 + MGP_NODShiLtJ_P0070107 Slc4a2 protein_coding protein_coding MGP_NODShiLtJ_T0070108.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25158290 25172488 + MGP_NODShiLtJ_P0070108 Slc4a2 protein_coding protein_coding MGP_NODShiLtJ_T0070109.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25158345 25161380 + Slc4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0070110.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25158505 25172488 + MGP_NODShiLtJ_P0070110 Slc4a2 protein_coding protein_coding MGP_NODShiLtJ_T0070111.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25160559 25161321 + Slc4a2 protein_coding retained_intron MGP_NODShiLtJ_T0070112.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25162877 25165894 + Slc4a2 protein_coding retained_intron MGP_NODShiLtJ_T0070113.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25167086 25168029 + Slc4a2 protein_coding retained_intron MGP_NODShiLtJ_T0070114.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25168301 25170797 + Slc4a2 protein_coding retained_intron MGP_NODShiLtJ_T0070117.1 MGP_NODShiLtJ_G0029145.1 mouse_genomes_project 5 25171286 25172113 + Slc4a2 protein_coding retained_intron MGP_NODShiLtJ_T0014817.1 MGP_NODShiLtJ_G0012925.1 mouse_genomes_project 5 33934192 33934574 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015046.1 MGP_NODShiLtJ_G0013154.1 mouse_genomes_project 5 154403797 154403954 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008150.1 MGP_NODShiLtJ_G0006636.1 mouse_genomes_project 5 113628019 113633215 + Gm43252 lincRNA lincRNA MGP_NODShiLtJ_T0072747.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402157 123447982 + Mtf2 protein_coding processed_transcript MGP_NODShiLtJ_T0072748.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402194 123448277 + MGP_NODShiLtJ_P0072748 Mtf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072749.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402199 123448443 + Mtf2 protein_coding processed_transcript MGP_NODShiLtJ_T0072750.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402199 123449088 + Mtf2 protein_coding processed_transcript MGP_NODShiLtJ_T0072751.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402200 123406061 + Mtf2 protein_coding retained_intron MGP_NODShiLtJ_T0072752.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402212 123423758 + MGP_NODShiLtJ_P0072752 Mtf2 protein_coding protein_coding MGP_NODShiLtJ_T0072753.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402225 123449823 + MGP_NODShiLtJ_P0072753 Mtf2 protein_coding protein_coding MGP_NODShiLtJ_T0072754.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402225 123449089 + MGP_NODShiLtJ_P0072754 Mtf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072755.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402225 123447820 + MGP_NODShiLtJ_P0072755 Mtf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072756.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402227 123447904 + MGP_NODShiLtJ_P0072756 Mtf2 protein_coding protein_coding MGP_NODShiLtJ_T0072757.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402227 123432017 + MGP_NODShiLtJ_P0072757 Mtf2 protein_coding protein_coding MGP_NODShiLtJ_T0072758.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123402240 123424346 + Mtf2 protein_coding processed_transcript MGP_NODShiLtJ_T0072759.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123409397 123417627 + Mtf2 protein_coding processed_transcript MGP_NODShiLtJ_T0072760.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123414603 123448289 + Mtf2 protein_coding processed_transcript MGP_NODShiLtJ_T0072761.1 MGP_NODShiLtJ_G0029650.1 mouse_genomes_project 5 123423385 123440998 + MGP_NODShiLtJ_P0072761 Mtf2 protein_coding protein_coding MGP_NODShiLtJ_T0074996.1 MGP_NODShiLtJ_G0030062.1 mouse_genomes_project 5 157030296 157038891 - MGP_NODShiLtJ_P0074996 Taf6 protein_coding protein_coding MGP_NODShiLtJ_T0074997.1 MGP_NODShiLtJ_G0030062.1 mouse_genomes_project 5 157030296 157039116 - MGP_NODShiLtJ_P0074997 Taf6 protein_coding protein_coding MGP_NODShiLtJ_T0074998.1 MGP_NODShiLtJ_G0030062.1 mouse_genomes_project 5 157030299 157038870 - MGP_NODShiLtJ_P0074998 Taf6 protein_coding protein_coding MGP_NODShiLtJ_T0074999.1 MGP_NODShiLtJ_G0030062.1 mouse_genomes_project 5 157030307 157038886 - MGP_NODShiLtJ_P0074999 Taf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075000.1 MGP_NODShiLtJ_G0030062.1 mouse_genomes_project 5 157031820 157033141 - Taf6 protein_coding retained_intron MGP_NODShiLtJ_T0075001.1 MGP_NODShiLtJ_G0030062.1 mouse_genomes_project 5 157034347 157038891 - MGP_NODShiLtJ_P0075001 Taf6 protein_coding protein_coding MGP_NODShiLtJ_T0075002.1 MGP_NODShiLtJ_G0030062.1 mouse_genomes_project 5 157035587 157038880 - MGP_NODShiLtJ_P0075002 Taf6 protein_coding protein_coding MGP_NODShiLtJ_T0075003.1 MGP_NODShiLtJ_G0030062.1 mouse_genomes_project 5 157037742 157038881 - Taf6 protein_coding processed_transcript MGP_NODShiLtJ_T0014966.1 MGP_NODShiLtJ_G0013074.1 mouse_genomes_project 5 112662899 112663280 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001476.1 MGP_NODShiLtJ_G0001392.1 mouse_genomes_project 5 37232681 37233136 + TEC TEC MGP_NODShiLtJ_T0001637.1 MGP_NODShiLtJ_G0001552.1 mouse_genomes_project 5 77180583 77183165 - TEC TEC MGP_NODShiLtJ_T0075520.1 MGP_NODShiLtJ_G0030175.1 mouse_genomes_project 5 166002541 166062472 + MGP_NODShiLtJ_P0075520 Cyp3a59 protein_coding protein_coding MGP_NODShiLtJ_T0075521.1 MGP_NODShiLtJ_G0030175.1 mouse_genomes_project 5 166002541 166062474 + MGP_NODShiLtJ_P0075521 Cyp3a59 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001586.1 MGP_NODShiLtJ_G0001501.1 mouse_genomes_project 5 71506130 71508445 + TEC TEC MGP_NODShiLtJ_T0069994.1 MGP_NODShiLtJ_G0029125.1 mouse_genomes_project 5 22275224 22294004 + MGP_NODShiLtJ_P0069994 Psmc2 protein_coding protein_coding MGP_NODShiLtJ_T0014887.1 MGP_NODShiLtJ_G0012995.1 mouse_genomes_project 5 71458223 71459088 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001404.1 MGP_NODShiLtJ_G0001323.1 mouse_genomes_project 5 2916727 2918668 + TEC TEC MGP_NODShiLtJ_T0008084.1 MGP_NODShiLtJ_G0006582.1 mouse_genomes_project 5 71933809 71935766 - Gm42564 lincRNA lincRNA MGP_NODShiLtJ_T0072739.1 MGP_NODShiLtJ_G0029647.1 mouse_genomes_project 5 123122838 123124516 + MGP_NODShiLtJ_P0072739 Ube2d2b protein_coding protein_coding MGP_NODShiLtJ_T0010591.1 MGP_NODShiLtJ_G0008724.1 mouse_genomes_project 5 105652883 105652983 + Mir6415 miRNA miRNA MGP_NODShiLtJ_T0004751.1 MGP_NODShiLtJ_G0004091.1 mouse_genomes_project 5 137071322 137089494 - Gm10390 antisense antisense MGP_NODShiLtJ_T0004752.1 MGP_NODShiLtJ_G0004091.1 mouse_genomes_project 5 137081717 137089496 - Gm10390 antisense antisense MGP_NODShiLtJ_T0004801.1 MGP_NODShiLtJ_G0004128.1 mouse_genomes_project 5 153531568 153532452 - Gm43500 antisense antisense MGP_NODShiLtJ_T0074888.1 MGP_NODShiLtJ_G0030039.1 mouse_genomes_project 5 156356827 156370542 + MGP_NODShiLtJ_P0074888 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069629.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 372600 415142 + MGP_NODShiLtJ_P0069629 Pex1 protein_coding protein_coding MGP_NODShiLtJ_T0069630.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 372600 415140 + MGP_NODShiLtJ_P0069630 Pex1 protein_coding protein_coding MGP_NODShiLtJ_T0069631.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 372733 383850 + MGP_NODShiLtJ_P0069631 Pex1 protein_coding protein_coding MGP_NODShiLtJ_T0069632.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 372905 401087 + MGP_NODShiLtJ_P0069632 Pex1 protein_coding protein_coding MGP_NODShiLtJ_T0069633.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 372923 414765 + MGP_NODShiLtJ_P0069633 Pex1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069634.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 382836 384109 + Pex1 protein_coding retained_intron MGP_NODShiLtJ_T0069635.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 384189 397717 + MGP_NODShiLtJ_P0069635 Pex1 protein_coding protein_coding MGP_NODShiLtJ_T0069636.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 387555 395124 + Pex1 protein_coding retained_intron MGP_NODShiLtJ_T0069637.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 395895 401560 + MGP_NODShiLtJ_P0069637 Pex1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069638.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 396766 397763 + Pex1 protein_coding retained_intron MGP_NODShiLtJ_T0069639.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 401121 401524 + Pex1 protein_coding retained_intron MGP_NODShiLtJ_T0069640.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 404261 404899 + Pex1 protein_coding retained_intron MGP_NODShiLtJ_T0069642.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 413079 413820 + Pex1 protein_coding retained_intron MGP_NODShiLtJ_T0069643.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 413523 414871 + Pex1 protein_coding retained_intron MGP_NODShiLtJ_T0069644.1 MGP_NODShiLtJ_G0029062.1 mouse_genomes_project 5 414059 414728 + Pex1 protein_coding retained_intron MGP_NODShiLtJ_T0001813.1 MGP_NODShiLtJ_G0001726.1 mouse_genomes_project 5 149859046 149860201 - TEC TEC MGP_NODShiLtJ_T0004808.1 MGP_NODShiLtJ_G0004135.1 mouse_genomes_project 5 156657681 156658137 + Gm43495 antisense antisense MGP_NODShiLtJ_T0100601.1 MGP_NODShiLtJ_G0038995.1 mouse_genomes_project 5 20436571 20436699 - Gm25761 snoRNA snoRNA MGP_NODShiLtJ_T0072851.1 MGP_NODShiLtJ_G0029675.1 mouse_genomes_project 5 125372177 125645425 - MGP_NODShiLtJ_P0072851 5430403G16Rik protein_coding protein_coding MGP_NODShiLtJ_T0075418.1 MGP_NODShiLtJ_G0030151.1 mouse_genomes_project 5 163779713 163800268 + MGP_NODShiLtJ_P0075418 Bri3 protein_coding protein_coding MGP_NODShiLtJ_T0075419.1 MGP_NODShiLtJ_G0030151.1 mouse_genomes_project 5 163790538 164022214 + MGP_NODShiLtJ_P0075419 Bri3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075420.1 MGP_NODShiLtJ_G0030151.1 mouse_genomes_project 5 163790547 163800447 + MGP_NODShiLtJ_P0075420 Bri3 protein_coding protein_coding MGP_NODShiLtJ_T0070176.1 MGP_NODShiLtJ_G0029158.1 mouse_genomes_project 5 25566269 25611699 - MGP_NODShiLtJ_P0070176 Rheb protein_coding protein_coding MGP_NODShiLtJ_T0070177.1 MGP_NODShiLtJ_G0029158.1 mouse_genomes_project 5 25567113 25581890 - Rheb protein_coding retained_intron MGP_NODShiLtJ_T0070178.1 MGP_NODShiLtJ_G0029158.1 mouse_genomes_project 5 25578065 25611503 - Rheb protein_coding retained_intron MGP_NODShiLtJ_T0070179.1 MGP_NODShiLtJ_G0029158.1 mouse_genomes_project 5 25609078 25611684 - Rheb protein_coding retained_intron MGP_NODShiLtJ_T0101971.1 MGP_NODShiLtJ_G0040139.1 mouse_genomes_project 5 169276954 169277177 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010630.1 MGP_NODShiLtJ_G0008763.1 mouse_genomes_project 5 158942037 158942102 - Mir7037 miRNA miRNA MGP_NODShiLtJ_T0014741.1 MGP_NODShiLtJ_G0012849.1 mouse_genomes_project 5 11017731 11018606 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070448.1 MGP_NODShiLtJ_G0029210.1 mouse_genomes_project 5 32305816 32313070 - MGP_NODShiLtJ_P0070448 Slc30a3 protein_coding protein_coding MGP_NODShiLtJ_T0070449.1 MGP_NODShiLtJ_G0029210.1 mouse_genomes_project 5 32307113 32308069 - MGP_NODShiLtJ_P0070449 Slc30a3 protein_coding protein_coding MGP_NODShiLtJ_T0070450.1 MGP_NODShiLtJ_G0029210.1 mouse_genomes_project 5 32308494 32313182 - MGP_NODShiLtJ_P0070450 Slc30a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070451.1 MGP_NODShiLtJ_G0029210.1 mouse_genomes_project 5 32309053 32314514 - MGP_NODShiLtJ_P0070451 Slc30a3 protein_coding protein_coding MGP_NODShiLtJ_T0070452.1 MGP_NODShiLtJ_G0029210.1 mouse_genomes_project 5 32309089 32328883 - MGP_NODShiLtJ_P0070452 Slc30a3 protein_coding protein_coding MGP_NODShiLtJ_T0010620.1 MGP_NODShiLtJ_G0008753.1 mouse_genomes_project 5 154932235 154932323 - Mir721 miRNA miRNA MGP_NODShiLtJ_T0070198.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26050783 26247036 - MGP_NODShiLtJ_P0070198 Kmt2c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070199.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26050792 26080950 - MGP_NODShiLtJ_P0070199 Kmt2c protein_coding protein_coding MGP_NODShiLtJ_T0070200.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26051420 26091424 - MGP_NODShiLtJ_P0070200 Kmt2c protein_coding protein_coding MGP_NODShiLtJ_T0070201.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26052603 26316143 - MGP_NODShiLtJ_P0070201 Kmt2c protein_coding protein_coding MGP_NODShiLtJ_T0070202.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26054645 26060231 - Kmt2c protein_coding retained_intron MGP_NODShiLtJ_T0070203.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26067950 26074254 - Kmt2c protein_coding retained_intron MGP_NODShiLtJ_T0070204.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26098587 26316100 - MGP_NODShiLtJ_P0070204 Kmt2c protein_coding protein_coding MGP_NODShiLtJ_T0070205.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26159279 26316153 - MGP_NODShiLtJ_P0070205 Kmt2c protein_coding protein_coding MGP_NODShiLtJ_T0070206.1 MGP_NODShiLtJ_G0029163.1 mouse_genomes_project 5 26179856 26316181 - Kmt2c protein_coding retained_intron MGP_NODShiLtJ_T0071683.1 MGP_NODShiLtJ_G0029408.1 mouse_genomes_project 5 79113322 79229382 - MGP_NODShiLtJ_P0071683 protein_coding protein_coding MGP_NODShiLtJ_T0071684.1 MGP_NODShiLtJ_G0029408.1 mouse_genomes_project 5 79118921 79228969 - MGP_NODShiLtJ_P0071684 protein_coding protein_coding MGP_NODShiLtJ_T0071685.1 MGP_NODShiLtJ_G0029408.1 mouse_genomes_project 5 79134708 79229079 - protein_coding retained_intron MGP_NODShiLtJ_T0100638.1 MGP_NODShiLtJ_G0039032.1 mouse_genomes_project 5 126277752 126277904 + Gm26277 snoRNA snoRNA MGP_NODShiLtJ_T0074260.1 MGP_NODShiLtJ_G0029928.1 mouse_genomes_project 5 147647911 147663431 - MGP_NODShiLtJ_P0074260 Zfp11 protein_coding protein_coding MGP_NODShiLtJ_T0072405.1 MGP_NODShiLtJ_G0029575.1 mouse_genomes_project 5 112529284 113096928 + MGP_NODShiLtJ_P0072405 1700007G11Rik protein_coding protein_coding MGP_NODShiLtJ_T0072406.1 MGP_NODShiLtJ_G0029575.1 mouse_genomes_project 5 112529331 112549827 + 1700007G11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0072407.1 MGP_NODShiLtJ_G0029575.1 mouse_genomes_project 5 112529336 112550222 + 1700007G11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0072408.1 MGP_NODShiLtJ_G0029575.1 mouse_genomes_project 5 112529350 113096956 + MGP_NODShiLtJ_P0072408 1700007G11Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100609.1 MGP_NODShiLtJ_G0039003.1 mouse_genomes_project 5 61622099 61622229 + Gm23896 snoRNA snoRNA MGP_NODShiLtJ_T0001658.1 MGP_NODShiLtJ_G0001572.1 mouse_genomes_project 5 83489184 83490514 + TEC TEC MGP_NODShiLtJ_T0004763.1 MGP_NODShiLtJ_G0004102.1 mouse_genomes_project 5 139947020 139950382 + Gm43301 antisense antisense MGP_NODShiLtJ_T0008310.1 MGP_NODShiLtJ_G0006737.1 mouse_genomes_project 5 144494786 144497733 - Gm43754 lincRNA lincRNA MGP_NODShiLtJ_T0014816.1 MGP_NODShiLtJ_G0012924.1 mouse_genomes_project 5 33861560 33861886 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001550.1 MGP_NODShiLtJ_G0001466.1 mouse_genomes_project 5 55250709 55252931 - TEC TEC MGP_NODShiLtJ_T0001715.1 MGP_NODShiLtJ_G0001629.1 mouse_genomes_project 5 126998559 126999111 + TEC TEC MGP_NODShiLtJ_T0070835.1 MGP_NODShiLtJ_G0029269.1 mouse_genomes_project 5 36261717 36280174 - MGP_NODShiLtJ_P0070835 Tnip2 protein_coding protein_coding MGP_NODShiLtJ_T0070836.1 MGP_NODShiLtJ_G0029269.1 mouse_genomes_project 5 36261717 36280146 - MGP_NODShiLtJ_P0070836 Tnip2 protein_coding protein_coding MGP_NODShiLtJ_T0070837.1 MGP_NODShiLtJ_G0029269.1 mouse_genomes_project 5 36261760 36280121 - MGP_NODShiLtJ_P0070837 Tnip2 protein_coding protein_coding MGP_NODShiLtJ_T0070838.1 MGP_NODShiLtJ_G0029269.1 mouse_genomes_project 5 36265233 36267244 - Tnip2 protein_coding retained_intron MGP_NODShiLtJ_T0070839.1 MGP_NODShiLtJ_G0029269.1 mouse_genomes_project 5 36266797 36280032 - Tnip2 protein_coding retained_intron MGP_NODShiLtJ_T0070840.1 MGP_NODShiLtJ_G0029269.1 mouse_genomes_project 5 36268911 36279843 - Tnip2 protein_coding retained_intron MGP_NODShiLtJ_T0072121.1 MGP_NODShiLtJ_G0029504.1 mouse_genomes_project 5 101006764 101027745 + MGP_NODShiLtJ_P0072121 Gm7714 protein_coding protein_coding MGP_NODShiLtJ_T0072065.1 MGP_NODShiLtJ_G0029480.1 mouse_genomes_project 5 99325746 99347748 + MGP_NODShiLtJ_P0072065 Ugt2b35 protein_coding protein_coding MGP_NODShiLtJ_T0017998.1 MGP_NODShiLtJ_G0015465.1 mouse_genomes_project 5 62802763 63003660 - 4932441J04Rik processed_transcript antisense MGP_NODShiLtJ_T0017999.1 MGP_NODShiLtJ_G0015465.1 mouse_genomes_project 5 63001878 63005942 - 4932441J04Rik processed_transcript retained_intron MGP_NODShiLtJ_T0070309.1 MGP_NODShiLtJ_G0029187.1 mouse_genomes_project 5 31357697 31378319 + MGP_NODShiLtJ_P0070309 protein_coding protein_coding MGP_NODShiLtJ_T0070310.1 MGP_NODShiLtJ_G0029187.1 mouse_genomes_project 5 31357714 31371639 + protein_coding retained_intron MGP_NODShiLtJ_T0070311.1 MGP_NODShiLtJ_G0029187.1 mouse_genomes_project 5 31357719 31388259 + MGP_NODShiLtJ_P0070311 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070312.1 MGP_NODShiLtJ_G0029187.1 mouse_genomes_project 5 31357742 31380257 + MGP_NODShiLtJ_P0070312 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070313.1 MGP_NODShiLtJ_G0029187.1 mouse_genomes_project 5 31378323 31382468 + protein_coding retained_intron MGP_NODShiLtJ_T0070314.1 MGP_NODShiLtJ_G0029187.1 mouse_genomes_project 5 31381934 31384349 + protein_coding retained_intron MGP_NODShiLtJ_T0075232.1 MGP_NODShiLtJ_G0030111.1 mouse_genomes_project 5 160173241 160309906 - MGP_NODShiLtJ_P0075232 Card11 protein_coding protein_coding MGP_NODShiLtJ_T0075233.1 MGP_NODShiLtJ_G0030111.1 mouse_genomes_project 5 160173243 160182473 - Card11 protein_coding retained_intron MGP_NODShiLtJ_T0075234.1 MGP_NODShiLtJ_G0030111.1 mouse_genomes_project 5 160216270 160309795 - Card11 protein_coding retained_intron MGP_NODShiLtJ_T0004740.1 MGP_NODShiLtJ_G0004086.1 mouse_genomes_project 5 133807563 133811049 + 9530046B11Rik antisense antisense MGP_NODShiLtJ_T0001653.1 MGP_NODShiLtJ_G0001567.1 mouse_genomes_project 5 82976186 82978510 - TEC TEC MGP_NODShiLtJ_T0071637.1 MGP_NODShiLtJ_G0029398.1 mouse_genomes_project 5 74966626 75004396 - MGP_NODShiLtJ_P0071637 Bend4 protein_coding protein_coding MGP_NODShiLtJ_T0071638.1 MGP_NODShiLtJ_G0029398.1 mouse_genomes_project 5 74966627 75004214 - MGP_NODShiLtJ_P0071638 Bend4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071639.1 MGP_NODShiLtJ_G0029398.1 mouse_genomes_project 5 74966627 75004214 - MGP_NODShiLtJ_P0071639 Bend4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071640.1 MGP_NODShiLtJ_G0029398.1 mouse_genomes_project 5 74966627 75003927 - MGP_NODShiLtJ_P0071640 Bend4 protein_coding protein_coding MGP_NODShiLtJ_T0071641.1 MGP_NODShiLtJ_G0029398.1 mouse_genomes_project 5 74966627 75004907 - MGP_NODShiLtJ_P0071641 Bend4 protein_coding protein_coding MGP_NODShiLtJ_T0001781.1 MGP_NODShiLtJ_G0001695.1 mouse_genomes_project 5 141544980 141546484 + TEC TEC MGP_NODShiLtJ_T0014833.1 MGP_NODShiLtJ_G0012941.1 mouse_genomes_project 5 37761667 37761962 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001638.1 MGP_NODShiLtJ_G0001553.1 mouse_genomes_project 5 77235184 77237355 - TEC TEC MGP_NODShiLtJ_T0004838.1 MGP_NODShiLtJ_G0004154.1 mouse_genomes_project 5 169900379 169961242 - Gm15997 antisense antisense MGP_NODShiLtJ_T0075064.1 MGP_NODShiLtJ_G0030077.1 mouse_genomes_project 5 158083631 158102634 - MGP_NODShiLtJ_P0075064 Pdgfa protein_coding protein_coding MGP_NODShiLtJ_T0075065.1 MGP_NODShiLtJ_G0030077.1 mouse_genomes_project 5 158084133 158102550 - MGP_NODShiLtJ_P0075065 Pdgfa protein_coding protein_coding MGP_NODShiLtJ_T0075066.1 MGP_NODShiLtJ_G0030077.1 mouse_genomes_project 5 158084553 158104572 - MGP_NODShiLtJ_P0075066 Pdgfa protein_coding protein_coding MGP_NODShiLtJ_T0075067.1 MGP_NODShiLtJ_G0030077.1 mouse_genomes_project 5 158084582 158105855 - MGP_NODShiLtJ_P0075067 Pdgfa protein_coding protein_coding MGP_NODShiLtJ_T0075068.1 MGP_NODShiLtJ_G0030077.1 mouse_genomes_project 5 158084756 158101878 - Pdgfa protein_coding processed_transcript MGP_NODShiLtJ_T0075069.1 MGP_NODShiLtJ_G0030077.1 mouse_genomes_project 5 158093878 158102081 - Pdgfa protein_coding processed_transcript MGP_NODShiLtJ_T0075070.1 MGP_NODShiLtJ_G0030077.1 mouse_genomes_project 5 158096049 158104486 - Pdgfa protein_coding processed_transcript MGP_NODShiLtJ_T0074352.1 MGP_NODShiLtJ_G0029947.1 mouse_genomes_project 5 148296369 148328729 + Tyw1 protein_coding retained_intron MGP_NODShiLtJ_T0074353.1 MGP_NODShiLtJ_G0029947.1 mouse_genomes_project 5 148297798 148321096 + MGP_NODShiLtJ_P0074353 Tyw1 protein_coding protein_coding MGP_NODShiLtJ_T0074354.1 MGP_NODShiLtJ_G0029947.1 mouse_genomes_project 5 148297798 148393805 + MGP_NODShiLtJ_P0074354 Tyw1 protein_coding protein_coding MGP_NODShiLtJ_T0074355.1 MGP_NODShiLtJ_G0029947.1 mouse_genomes_project 5 148301214 148312728 + MGP_NODShiLtJ_P0074355 Tyw1 protein_coding protein_coding MGP_NODShiLtJ_T0098388.1 MGP_NODShiLtJ_G0036793.1 mouse_genomes_project 5 317111 317868 + Gm43017 sense_intronic sense_intronic MGP_NODShiLtJ_T0074467.1 MGP_NODShiLtJ_G0029960.1 mouse_genomes_project 5 152893573 152895599 - MGP_NODShiLtJ_P0074467 Syna protein_coding protein_coding MGP_NODShiLtJ_T0008043.1 MGP_NODShiLtJ_G0006548.1 mouse_genomes_project 5 41568140 41719879 - 4930513D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008044.1 MGP_NODShiLtJ_G0006548.1 mouse_genomes_project 5 41568955 41719922 - 4930513D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008045.1 MGP_NODShiLtJ_G0006548.1 mouse_genomes_project 5 41583377 41719877 - 4930513D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0004827.1 MGP_NODShiLtJ_G0004146.1 mouse_genomes_project 5 163423848 163486321 - Gm17135 antisense antisense MGP_NODShiLtJ_T0072122.1 MGP_NODShiLtJ_G0029505.1 mouse_genomes_project 5 101064220 101077429 + MGP_NODShiLtJ_P0072122 Prol1 protein_coding protein_coding MGP_NODShiLtJ_T0072627.1 MGP_NODShiLtJ_G0029627.1 mouse_genomes_project 5 120669607 120766781 + MGP_NODShiLtJ_P0072627 Lrrc8c protein_coding protein_coding MGP_NODShiLtJ_T0072628.1 MGP_NODShiLtJ_G0029627.1 mouse_genomes_project 5 120669635 120732480 + MGP_NODShiLtJ_P0072628 Lrrc8c protein_coding protein_coding MGP_NODShiLtJ_T0072629.1 MGP_NODShiLtJ_G0029627.1 mouse_genomes_project 5 120669692 120694750 + Lrrc8c protein_coding retained_intron MGP_NODShiLtJ_T0072630.1 MGP_NODShiLtJ_G0029627.1 mouse_genomes_project 5 120708970 120760660 + MGP_NODShiLtJ_P0072630 Lrrc8c protein_coding protein_coding MGP_NODShiLtJ_T0074926.1 MGP_NODShiLtJ_G0030046.1 mouse_genomes_project 5 156541873 156546631 - MGP_NODShiLtJ_P0074926 Mepce protein_coding protein_coding MGP_NODShiLtJ_T0074927.1 MGP_NODShiLtJ_G0030046.1 mouse_genomes_project 5 156542396 156546683 - MGP_NODShiLtJ_P0074927 Mepce protein_coding protein_coding MGP_NODShiLtJ_T0074928.1 MGP_NODShiLtJ_G0030046.1 mouse_genomes_project 5 156542450 156543318 - Mepce protein_coding retained_intron MGP_NODShiLtJ_T0074929.1 MGP_NODShiLtJ_G0030046.1 mouse_genomes_project 5 156543097 156548414 - MGP_NODShiLtJ_P0074929 Mepce protein_coding protein_coding MGP_NODShiLtJ_T0074930.1 MGP_NODShiLtJ_G0030046.1 mouse_genomes_project 5 156544853 156546659 - Mepce protein_coding processed_transcript MGP_NODShiLtJ_T0008290.1 MGP_NODShiLtJ_G0006725.1 mouse_genomes_project 5 140564441 140567990 + 4932422M17Rik lincRNA lincRNA MGP_NODShiLtJ_T0001516.1 MGP_NODShiLtJ_G0001432.1 mouse_genomes_project 5 48727986 48729108 + TEC TEC MGP_NODShiLtJ_T0072074.1 MGP_NODShiLtJ_G0029485.1 mouse_genomes_project 5 99827298 99841440 - MGP_NODShiLtJ_P0072074 protein_coding protein_coding MGP_NODShiLtJ_T0015006.1 MGP_NODShiLtJ_G0013114.1 mouse_genomes_project 5 126277930 126278249 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073313.1 MGP_NODShiLtJ_G0029765.1 mouse_genomes_project 5 131772054 131779096 + MGP_NODShiLtJ_P0073313 Srsf9 protein_coding protein_coding MGP_NODShiLtJ_T0073314.1 MGP_NODShiLtJ_G0029765.1 mouse_genomes_project 5 131773615 131779025 + Srsf9 protein_coding processed_transcript MGP_NODShiLtJ_T0073315.1 MGP_NODShiLtJ_G0029765.1 mouse_genomes_project 5 131774601 131778612 + Srsf9 protein_coding processed_transcript MGP_NODShiLtJ_T0073316.1 MGP_NODShiLtJ_G0029765.1 mouse_genomes_project 5 131776539 131779025 + MGP_NODShiLtJ_P0073316 Srsf9 protein_coding protein_coding MGP_NODShiLtJ_T0071447.1 MGP_NODShiLtJ_G0029372.1 mouse_genomes_project 5 72302420 72307295 - MGP_NODShiLtJ_P0071447 protein_coding protein_coding MGP_NODShiLtJ_T0070214.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 27764385 27802255 + Dpp6 protein_coding processed_transcript MGP_NODShiLtJ_T0070215.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 27764539 28716948 + MGP_NODShiLtJ_P0070215 Dpp6 protein_coding protein_coding MGP_NODShiLtJ_T0070216.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 27764616 28426769 + Dpp6 protein_coding retained_intron MGP_NODShiLtJ_T0070217.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 27858093 28718032 + MGP_NODShiLtJ_P0070217 Dpp6 protein_coding protein_coding MGP_NODShiLtJ_T0070218.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 28007241 28718028 + MGP_NODShiLtJ_P0070218 Dpp6 protein_coding protein_coding MGP_NODShiLtJ_T0070219.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 28007435 28010173 + Dpp6 protein_coding retained_intron MGP_NODShiLtJ_T0070220.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 28228398 28718027 + MGP_NODShiLtJ_P0070220 Dpp6 protein_coding protein_coding MGP_NODShiLtJ_T0070221.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 28228398 28365197 + MGP_NODShiLtJ_P0070221 Dpp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070222.1 MGP_NODShiLtJ_G0029167.1 mouse_genomes_project 5 28513191 28687509 + Dpp6 protein_coding retained_intron MGP_NODShiLtJ_T0010604.1 MGP_NODShiLtJ_G0008737.1 mouse_genomes_project 5 132066613 132066674 + Mir7029 miRNA miRNA MGP_NODShiLtJ_T0008350.1 MGP_NODShiLtJ_G0006764.1 mouse_genomes_project 5 158668642 158691076 + 4930500L23Rik lincRNA lincRNA MGP_NODShiLtJ_T0001789.1 MGP_NODShiLtJ_G0001702.1 mouse_genomes_project 5 144166618 144167599 + TEC TEC MGP_NODShiLtJ_T0008061.1 MGP_NODShiLtJ_G0006563.1 mouse_genomes_project 5 55953305 55954517 + Gm43177 lincRNA lincRNA MGP_NODShiLtJ_T0010619.1 MGP_NODShiLtJ_G0008752.1 mouse_genomes_project 5 154639964 154640046 + Mir7035 miRNA miRNA MGP_NODShiLtJ_T0074542.1 MGP_NODShiLtJ_G0029975.1 mouse_genomes_project 5 153479081 153484465 - MGP_NODShiLtJ_P0074542 Vps37d protein_coding protein_coding MGP_NODShiLtJ_T0074543.1 MGP_NODShiLtJ_G0029975.1 mouse_genomes_project 5 153479084 153484465 - MGP_NODShiLtJ_P0074543 Vps37d protein_coding protein_coding MGP_NODShiLtJ_T0072691.1 MGP_NODShiLtJ_G0029636.1 mouse_genomes_project 5 122599554 122659496 + MGP_NODShiLtJ_P0072691 protein_coding protein_coding MGP_NODShiLtJ_T0072692.1 MGP_NODShiLtJ_G0029636.1 mouse_genomes_project 5 122599570 122619140 + MGP_NODShiLtJ_P0072692 protein_coding protein_coding MGP_NODShiLtJ_T0072693.1 MGP_NODShiLtJ_G0029636.1 mouse_genomes_project 5 122599587 122610474 + protein_coding processed_transcript MGP_NODShiLtJ_T0072694.1 MGP_NODShiLtJ_G0029636.1 mouse_genomes_project 5 122639151 122658799 + protein_coding processed_transcript MGP_NODShiLtJ_T0008142.1 MGP_NODShiLtJ_G0006631.1 mouse_genomes_project 5 111264824 111277141 + Gm2861 lincRNA lincRNA MGP_NODShiLtJ_T0098053.1 MGP_NODShiLtJ_G0036465.1 mouse_genomes_project 5 136179398 136179515 + n-R5s175 rRNA rRNA MGP_NODShiLtJ_T0100639.1 MGP_NODShiLtJ_G0039033.1 mouse_genomes_project 5 126692858 126692991 - Gm26079 snoRNA snoRNA MGP_NODShiLtJ_T0008400.1 MGP_NODShiLtJ_G0006802.1 mouse_genomes_project 5 170335830 170338503 - Gm43450 lincRNA lincRNA MGP_NODShiLtJ_T0075148.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158919459 158951289 - MGP_NODShiLtJ_P0075148 Ints1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0075149.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158924193 158951307 - MGP_NODShiLtJ_P0075149 Ints1 protein_coding protein_coding MGP_NODShiLtJ_T0075150.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158924196 158927773 - Ints1 protein_coding retained_intron MGP_NODShiLtJ_T0075151.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158924196 158951272 - MGP_NODShiLtJ_P0075151 Ints1 protein_coding protein_coding MGP_NODShiLtJ_T0075152.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158924197 158927893 - MGP_NODShiLtJ_P0075152 Ints1 protein_coding protein_coding MGP_NODShiLtJ_T0075153.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158934504 158935427 - Ints1 protein_coding retained_intron MGP_NODShiLtJ_T0075154.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158939228 158942057 - Ints1 protein_coding retained_intron MGP_NODShiLtJ_T0075155.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158941256 158951308 - Ints1 protein_coding retained_intron MGP_NODShiLtJ_T0075156.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158941582 158942613 - Ints1 protein_coding retained_intron MGP_NODShiLtJ_T0075157.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158943489 158945847 - Ints1 protein_coding retained_intron MGP_NODShiLtJ_T0075158.1 MGP_NODShiLtJ_G0030092.1 mouse_genomes_project 5 158946733 158951308 - MGP_NODShiLtJ_P0075158 Ints1 protein_coding protein_coding MGP_NODShiLtJ_T0074148.1 MGP_NODShiLtJ_G0029907.1 mouse_genomes_project 5 142578101 142587390 + MGP_NODShiLtJ_P0074148 Fam101a protein_coding protein_coding MGP_NODShiLtJ_T0074149.1 MGP_NODShiLtJ_G0029907.1 mouse_genomes_project 5 142578355 142587389 + MGP_NODShiLtJ_P0074149 Fam101a protein_coding protein_coding MGP_NODShiLtJ_T0074150.1 MGP_NODShiLtJ_G0029907.1 mouse_genomes_project 5 142584957 142586337 + Fam101a protein_coding processed_transcript MGP_NODShiLtJ_T0014847.1 MGP_NODShiLtJ_G0012955.1 mouse_genomes_project 5 47111717 47112354 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075585.1 MGP_NODShiLtJ_G0030193.1 mouse_genomes_project 5 167320232 167322492 + MGP_NODShiLtJ_P0075585 Gsx1 protein_coding protein_coding MGP_NODShiLtJ_T0072873.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076441 126077162 + MGP_NODShiLtJ_P0072873 Chfr protein_coding protein_coding MGP_NODShiLtJ_T0072874.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076448 126107824 + MGP_NODShiLtJ_P0072874 Chfr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072875.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076448 126116033 + MGP_NODShiLtJ_P0072875 Chfr protein_coding protein_coding MGP_NODShiLtJ_T0072876.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076450 126115582 + MGP_NODShiLtJ_P0072876 Chfr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072877.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076456 126115721 + MGP_NODShiLtJ_P0072877 Chfr protein_coding protein_coding MGP_NODShiLtJ_T0072878.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076459 126112463 + Chfr protein_coding retained_intron MGP_NODShiLtJ_T0072879.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076459 126116034 + MGP_NODShiLtJ_P0072879 Chfr protein_coding protein_coding MGP_NODShiLtJ_T0072880.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076477 126116031 + MGP_NODShiLtJ_P0072880 Chfr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072881.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076506 126087145 + MGP_NODShiLtJ_P0072881 Chfr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072882.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126076524 126084255 + MGP_NODShiLtJ_P0072882 Chfr protein_coding protein_coding MGP_NODShiLtJ_T0072883.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126096905 126106971 + Chfr protein_coding retained_intron MGP_NODShiLtJ_T0072884.1 MGP_NODShiLtJ_G0029681.1 mouse_genomes_project 5 126107822 126115067 + Chfr protein_coding retained_intron MGP_NODShiLtJ_T0014902.1 MGP_NODShiLtJ_G0013010.1 mouse_genomes_project 5 78033654 78033938 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007981.1 MGP_NODShiLtJ_G0006511.1 mouse_genomes_project 5 22924218 22928043 - Gm43657 lincRNA lincRNA MGP_NODShiLtJ_T0001843.1 MGP_NODShiLtJ_G0001755.1 mouse_genomes_project 5 154073015 154078642 - TEC TEC MGP_NODShiLtJ_T0072885.1 MGP_NODShiLtJ_G0029682.1 mouse_genomes_project 5 126120663 126165286 + MGP_NODShiLtJ_P0072885 Golga3 protein_coding protein_coding MGP_NODShiLtJ_T0072886.1 MGP_NODShiLtJ_G0029682.1 mouse_genomes_project 5 126120819 126130264 + Golga3 protein_coding retained_intron MGP_NODShiLtJ_T0072887.1 MGP_NODShiLtJ_G0029682.1 mouse_genomes_project 5 126120841 126128329 + MGP_NODShiLtJ_P0072887 Golga3 protein_coding protein_coding MGP_NODShiLtJ_T0072888.1 MGP_NODShiLtJ_G0029682.1 mouse_genomes_project 5 126120841 126162014 + MGP_NODShiLtJ_P0072888 Golga3 protein_coding protein_coding MGP_NODShiLtJ_T0072889.1 MGP_NODShiLtJ_G0029682.1 mouse_genomes_project 5 126120859 126132178 + Golga3 protein_coding retained_intron MGP_NODShiLtJ_T0014915.1 MGP_NODShiLtJ_G0013023.1 mouse_genomes_project 5 84205037 84205365 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004652.1 MGP_NODShiLtJ_G0004024.1 mouse_genomes_project 5 75260616 75264977 + Gm15478 antisense antisense MGP_NODShiLtJ_T0099372.1 MGP_NODShiLtJ_G0037766.1 mouse_genomes_project 5 104263208 104263315 - Gm23092 snRNA snRNA MGP_NODShiLtJ_T0008313.1 MGP_NODShiLtJ_G0006740.1 mouse_genomes_project 5 144800134 144817976 + 4933438B17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008314.1 MGP_NODShiLtJ_G0006740.1 mouse_genomes_project 5 144803580 144861394 + 4933438B17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008315.1 MGP_NODShiLtJ_G0006740.1 mouse_genomes_project 5 144803587 144817831 + 4933438B17Rik lincRNA lincRNA MGP_NODShiLtJ_T0070418.1 MGP_NODShiLtJ_G0029206.1 mouse_genomes_project 5 32176313 32184663 + MGP_NODShiLtJ_P0070418 Tcf23 protein_coding protein_coding MGP_NODShiLtJ_T0014890.1 MGP_NODShiLtJ_G0012998.1 mouse_genomes_project 5 71458223 71459175 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073813.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140105628 140126265 - MGP_NODShiLtJ_P0073813 Camkk2 protein_coding protein_coding MGP_NODShiLtJ_T0073814.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140106251 140116515 - MGP_NODShiLtJ_P0073814 Camkk2 protein_coding protein_coding MGP_NODShiLtJ_T0073815.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140106498 140151756 - MGP_NODShiLtJ_P0073815 Camkk2 protein_coding protein_coding MGP_NODShiLtJ_T0073816.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140113041 140151831 - Camkk2 protein_coding retained_intron MGP_NODShiLtJ_T0073817.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140118865 140136282 - MGP_NODShiLtJ_P0073817 Camkk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073818.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140120453 140151767 - Camkk2 protein_coding processed_transcript MGP_NODShiLtJ_T0073819.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140126230 140151713 - MGP_NODShiLtJ_P0073819 Camkk2 protein_coding protein_coding MGP_NODShiLtJ_T0073820.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140128698 140151757 - MGP_NODShiLtJ_P0073820 Camkk2 protein_coding protein_coding MGP_NODShiLtJ_T0073821.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140129965 140151841 - Camkk2 protein_coding retained_intron MGP_NODShiLtJ_T0073822.1 MGP_NODShiLtJ_G0029857.1 mouse_genomes_project 5 140136422 140151747 - MGP_NODShiLtJ_P0073822 Camkk2 protein_coding protein_coding MGP_NODShiLtJ_T0014981.1 MGP_NODShiLtJ_G0013089.1 mouse_genomes_project 5 120964426 120966336 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008051.1 MGP_NODShiLtJ_G0006554.1 mouse_genomes_project 5 46106718 46110880 + Gm43021 lincRNA lincRNA MGP_NODShiLtJ_T0014765.1 MGP_NODShiLtJ_G0012873.1 mouse_genomes_project 5 22087222 22088817 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071753.1 MGP_NODShiLtJ_G0029421.1 mouse_genomes_project 5 81707583 81716481 - MGP_NODShiLtJ_P0071753 Gm10135 protein_coding protein_coding MGP_NODShiLtJ_T0075201.1 MGP_NODShiLtJ_G0030106.1 mouse_genomes_project 5 159909731 159939305 - MGP_NODShiLtJ_P0075201 Ttyh3 protein_coding protein_coding MGP_NODShiLtJ_T0075202.1 MGP_NODShiLtJ_G0030106.1 mouse_genomes_project 5 159912296 159916500 - MGP_NODShiLtJ_P0075202 Ttyh3 protein_coding protein_coding MGP_NODShiLtJ_T0075203.1 MGP_NODShiLtJ_G0030106.1 mouse_genomes_project 5 159920349 159920821 - Ttyh3 protein_coding retained_intron MGP_NODShiLtJ_T0075204.1 MGP_NODShiLtJ_G0030106.1 mouse_genomes_project 5 159920730 159926949 - Ttyh3 protein_coding retained_intron MGP_NODShiLtJ_T0075205.1 MGP_NODShiLtJ_G0030106.1 mouse_genomes_project 5 159938948 159939475 - Ttyh3 protein_coding processed_transcript MGP_NODShiLtJ_T0001612.1 MGP_NODShiLtJ_G0001527.1 mouse_genomes_project 5 73828189 73830194 - TEC TEC MGP_NODShiLtJ_T0073920.1 MGP_NODShiLtJ_G0029872.1 mouse_genomes_project 5 140981146 141014194 + MGP_NODShiLtJ_P0073920 Lrrc43 protein_coding protein_coding MGP_NODShiLtJ_T0073921.1 MGP_NODShiLtJ_G0029872.1 mouse_genomes_project 5 140981166 141014207 + MGP_NODShiLtJ_P0073921 Lrrc43 protein_coding protein_coding MGP_NODShiLtJ_T0073922.1 MGP_NODShiLtJ_G0029872.1 mouse_genomes_project 5 140981168 141014200 + MGP_NODShiLtJ_P0073922 Lrrc43 protein_coding protein_coding MGP_NODShiLtJ_T0004780.1 MGP_NODShiLtJ_G0004112.1 mouse_genomes_project 5 142372390 142372902 - Gm43777 antisense antisense MGP_NODShiLtJ_T0075495.1 MGP_NODShiLtJ_G0030165.1 mouse_genomes_project 5 164868692 164875259 - MGP_NODShiLtJ_P0075495 Zkscan14 protein_coding protein_coding MGP_NODShiLtJ_T0075496.1 MGP_NODShiLtJ_G0030165.1 mouse_genomes_project 5 164869369 164875248 - MGP_NODShiLtJ_P0075496 Zkscan14 protein_coding protein_coding MGP_NODShiLtJ_T0075497.1 MGP_NODShiLtJ_G0030165.1 mouse_genomes_project 5 164873016 164875259 - MGP_NODShiLtJ_P0075497 Zkscan14 protein_coding protein_coding MGP_NODShiLtJ_T0073993.1 MGP_NODShiLtJ_G0029881.1 mouse_genomes_project 5 141407227 141410514 - MGP_NODShiLtJ_P0073993 Hcar1 protein_coding protein_coding MGP_NODShiLtJ_T0101953.1 MGP_NODShiLtJ_G0040121.1 mouse_genomes_project 5 99535459 99545726 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0070610.1 MGP_NODShiLtJ_G0029233.1 mouse_genomes_project 5 32940867 32956840 - Rbks protein_coding processed_transcript MGP_NODShiLtJ_T0070611.1 MGP_NODShiLtJ_G0029233.1 mouse_genomes_project 5 32940867 33014940 - MGP_NODShiLtJ_P0070611 Rbks protein_coding protein_coding MGP_NODShiLtJ_T0070614.1 MGP_NODShiLtJ_G0029233.1 mouse_genomes_project 5 32976346 33004287 - Rbks protein_coding processed_transcript MGP_NODShiLtJ_T0014910.1 MGP_NODShiLtJ_G0013018.1 mouse_genomes_project 5 82287465 82288354 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010596.1 MGP_NODShiLtJ_G0008729.1 mouse_genomes_project 5 119074128 119074238 + Gm23616 miRNA miRNA MGP_NODShiLtJ_T0071159.1 MGP_NODShiLtJ_G0029320.1 mouse_genomes_project 5 44092312 44212532 - MGP_NODShiLtJ_P0071159 Rab28 protein_coding protein_coding MGP_NODShiLtJ_T0071160.1 MGP_NODShiLtJ_G0029320.1 mouse_genomes_project 5 44092312 44212565 - MGP_NODShiLtJ_P0071160 Rab28 protein_coding protein_coding MGP_NODShiLtJ_T0071161.1 MGP_NODShiLtJ_G0029320.1 mouse_genomes_project 5 44092313 44212568 - MGP_NODShiLtJ_P0071161 Rab28 protein_coding protein_coding MGP_NODShiLtJ_T0071162.1 MGP_NODShiLtJ_G0029320.1 mouse_genomes_project 5 44093069 44094839 - Rab28 protein_coding retained_intron MGP_NODShiLtJ_T0071163.1 MGP_NODShiLtJ_G0029320.1 mouse_genomes_project 5 44093563 44096454 - Rab28 protein_coding retained_intron MGP_NODShiLtJ_T0075324.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162820088 162834406 - MGP_NODShiLtJ_P0075324 Zdhhc4 protein_coding protein_coding MGP_NODShiLtJ_T0075325.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162820089 162834370 - MGP_NODShiLtJ_P0075325 Zdhhc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075326.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162820096 162831504 - MGP_NODShiLtJ_P0075326 Zdhhc4 protein_coding protein_coding MGP_NODShiLtJ_T0075327.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162823981 162834361 - Zdhhc4 protein_coding processed_transcript MGP_NODShiLtJ_T0075328.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162824036 162834373 - MGP_NODShiLtJ_P0075328 Zdhhc4 protein_coding protein_coding MGP_NODShiLtJ_T0075329.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162824042 162834364 - MGP_NODShiLtJ_P0075329 Zdhhc4 protein_coding protein_coding MGP_NODShiLtJ_T0075330.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162829282 162834379 - MGP_NODShiLtJ_P0075330 Zdhhc4 protein_coding protein_coding MGP_NODShiLtJ_T0075331.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162829369 162834379 - Zdhhc4 protein_coding processed_transcript MGP_NODShiLtJ_T0075332.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162829384 162834378 - MGP_NODShiLtJ_P0075332 Zdhhc4 protein_coding protein_coding MGP_NODShiLtJ_T0075333.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162829482 162833719 - Zdhhc4 protein_coding retained_intron MGP_NODShiLtJ_T0075334.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162831142 162834339 - Zdhhc4 protein_coding processed_transcript MGP_NODShiLtJ_T0075335.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162831205 162834342 - Zdhhc4 protein_coding processed_transcript MGP_NODShiLtJ_T0075336.1 MGP_NODShiLtJ_G0030132.1 mouse_genomes_project 5 162833444 162834352 - Zdhhc4 protein_coding processed_transcript MGP_NODShiLtJ_T0100647.1 MGP_NODShiLtJ_G0039041.1 mouse_genomes_project 5 167332424 167332554 - Gm24556 snoRNA snoRNA MGP_NODShiLtJ_T0069647.1 MGP_NODShiLtJ_G0029064.1 mouse_genomes_project 5 430109 466379 + MGP_NODShiLtJ_P0069647 Tmbim7 protein_coding protein_coding MGP_NODShiLtJ_T0069648.1 MGP_NODShiLtJ_G0029064.1 mouse_genomes_project 5 447096 472787 + MGP_NODShiLtJ_P0069648 Tmbim7 protein_coding protein_coding MGP_NODShiLtJ_T0069649.1 MGP_NODShiLtJ_G0029064.1 mouse_genomes_project 5 447271 459381 + Tmbim7 protein_coding retained_intron MGP_NODShiLtJ_T0069650.1 MGP_NODShiLtJ_G0029064.1 mouse_genomes_project 5 447272 472914 + MGP_NODShiLtJ_P0069650 Tmbim7 protein_coding protein_coding MGP_NODShiLtJ_T0069651.1 MGP_NODShiLtJ_G0029064.1 mouse_genomes_project 5 453991 473698 + MGP_NODShiLtJ_P0069651 Tmbim7 protein_coding protein_coding MGP_NODShiLtJ_T0008141.1 MGP_NODShiLtJ_G0006630.1 mouse_genomes_project 5 111202234 111214893 + lincRNA lincRNA MGP_NODShiLtJ_T0073538.1 MGP_NODShiLtJ_G0029808.1 mouse_genomes_project 5 137588597 137610345 - MGP_NODShiLtJ_P0073538 Rita1 protein_coding protein_coding MGP_NODShiLtJ_T0073539.1 MGP_NODShiLtJ_G0029808.1 mouse_genomes_project 5 137597307 137609643 - MGP_NODShiLtJ_P0073539 Rita1 protein_coding protein_coding MGP_NODShiLtJ_T0073540.1 MGP_NODShiLtJ_G0029808.1 mouse_genomes_project 5 137597308 137603738 - Rita1 protein_coding processed_transcript MGP_NODShiLtJ_T0073541.1 MGP_NODShiLtJ_G0029808.1 mouse_genomes_project 5 137605056 137610595 - Rita1 protein_coding processed_transcript MGP_NODShiLtJ_T0073542.1 MGP_NODShiLtJ_G0029808.1 mouse_genomes_project 5 137607078 137610595 - MGP_NODShiLtJ_P0073542 Rita1 protein_coding protein_coding MGP_NODShiLtJ_T0073543.1 MGP_NODShiLtJ_G0029808.1 mouse_genomes_project 5 137607078 137610595 - MGP_NODShiLtJ_P0073543 Rita1 protein_coding protein_coding MGP_NODShiLtJ_T0073544.1 MGP_NODShiLtJ_G0029808.1 mouse_genomes_project 5 137607931 137610576 - MGP_NODShiLtJ_P0073544 Rita1 protein_coding protein_coding MGP_NODShiLtJ_T0001795.1 MGP_NODShiLtJ_G0001708.1 mouse_genomes_project 5 146390666 146392072 + TEC TEC MGP_NODShiLtJ_T0099387.1 MGP_NODShiLtJ_G0037781.1 mouse_genomes_project 5 129237755 129237864 + Gm22740 snRNA snRNA MGP_NODShiLtJ_T0015069.1 MGP_NODShiLtJ_G0013177.1 mouse_genomes_project 5 162554769 162554989 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074061.1 MGP_NODShiLtJ_G0029893.1 mouse_genomes_project 5 141917651 141930785 - MGP_NODShiLtJ_P0074061 Gm12184 protein_coding protein_coding MGP_NODShiLtJ_T0074062.1 MGP_NODShiLtJ_G0029893.1 mouse_genomes_project 5 141917839 141927908 - MGP_NODShiLtJ_P0074062 Gm12184 protein_coding protein_coding MGP_NODShiLtJ_T0074063.1 MGP_NODShiLtJ_G0029893.1 mouse_genomes_project 5 141920877 141943103 - MGP_NODShiLtJ_P0074063 Gm12184 protein_coding protein_coding MGP_NODShiLtJ_T0001634.1 MGP_NODShiLtJ_G0001549.1 mouse_genomes_project 5 77121797 77123374 - TEC TEC MGP_NODShiLtJ_T0072955.1 MGP_NODShiLtJ_G0029694.1 mouse_genomes_project 5 126776057 126782987 - MGP_NODShiLtJ_P0072955 Pus1 protein_coding protein_coding MGP_NODShiLtJ_T0072956.1 MGP_NODShiLtJ_G0029694.1 mouse_genomes_project 5 126776057 126782358 - MGP_NODShiLtJ_P0072956 Pus1 protein_coding protein_coding MGP_NODShiLtJ_T0072957.1 MGP_NODShiLtJ_G0029694.1 mouse_genomes_project 5 126776057 126782987 - MGP_NODShiLtJ_P0072957 Pus1 protein_coding protein_coding MGP_NODShiLtJ_T0072958.1 MGP_NODShiLtJ_G0029694.1 mouse_genomes_project 5 126776057 126783050 - MGP_NODShiLtJ_P0072958 Pus1 protein_coding protein_coding MGP_NODShiLtJ_T0072959.1 MGP_NODShiLtJ_G0029694.1 mouse_genomes_project 5 126776058 126783006 - MGP_NODShiLtJ_P0072959 Pus1 protein_coding protein_coding MGP_NODShiLtJ_T0072960.1 MGP_NODShiLtJ_G0029694.1 mouse_genomes_project 5 126777926 126782537 - MGP_NODShiLtJ_P0072960 Pus1 protein_coding protein_coding MGP_NODShiLtJ_T0072961.1 MGP_NODShiLtJ_G0029694.1 mouse_genomes_project 5 126777935 126782982 - MGP_NODShiLtJ_P0072961 Pus1 protein_coding protein_coding MGP_NODShiLtJ_T0071849.1 MGP_NODShiLtJ_G0029437.1 mouse_genomes_project 5 83934074 83985494 - MGP_NODShiLtJ_P0071849 Chic2 protein_coding protein_coding MGP_NODShiLtJ_T0071850.1 MGP_NODShiLtJ_G0029437.1 mouse_genomes_project 5 83947412 83985032 - Chic2 protein_coding retained_intron MGP_NODShiLtJ_T0014989.1 MGP_NODShiLtJ_G0013097.1 mouse_genomes_project 5 122497575 122498320 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073423.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133812458 133978365 + MGP_NODShiLtJ_P0073423 Taok3 protein_coding protein_coding MGP_NODShiLtJ_T0073424.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133818607 133900957 + MGP_NODShiLtJ_P0073424 Taok3 protein_coding protein_coding MGP_NODShiLtJ_T0073425.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133827177 133892992 + Taok3 protein_coding retained_intron MGP_NODShiLtJ_T0073426.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133827177 133978223 + MGP_NODShiLtJ_P0073426 Taok3 protein_coding protein_coding MGP_NODShiLtJ_T0073427.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133827184 133978367 + MGP_NODShiLtJ_P0073427 Taok3 protein_coding protein_coding MGP_NODShiLtJ_T0073428.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133827204 133939279 + Taok3 protein_coding retained_intron MGP_NODShiLtJ_T0073429.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133827207 133951893 + MGP_NODShiLtJ_P0073429 Taok3 protein_coding protein_coding MGP_NODShiLtJ_T0073430.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133827230 133885136 + Taok3 protein_coding retained_intron MGP_NODShiLtJ_T0073431.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133900938 133925776 + MGP_NODShiLtJ_P0073431 Taok3 protein_coding protein_coding MGP_NODShiLtJ_T0073432.1 MGP_NODShiLtJ_G0029784.1 mouse_genomes_project 5 133938290 133977017 + MGP_NODShiLtJ_P0073432 Taok3 protein_coding protein_coding MGP_NODShiLtJ_T0069824.1 MGP_NODShiLtJ_G0029093.1 mouse_genomes_project 5 6550018 6623755 + MGP_NODShiLtJ_P0069824 Abcb4 protein_coding protein_coding MGP_NODShiLtJ_T0069825.1 MGP_NODShiLtJ_G0029093.1 mouse_genomes_project 5 6550022 6558979 + Abcb4 protein_coding retained_intron MGP_NODShiLtJ_T0069826.1 MGP_NODShiLtJ_G0029093.1 mouse_genomes_project 5 6550250 6602894 + MGP_NODShiLtJ_P0069826 Abcb4 protein_coding protein_coding MGP_NODShiLtJ_T0069827.1 MGP_NODShiLtJ_G0029093.1 mouse_genomes_project 5 6586451 6592481 + Abcb4 protein_coding retained_intron MGP_NODShiLtJ_T0069828.1 MGP_NODShiLtJ_G0029093.1 mouse_genomes_project 5 6623088 6623760 + Abcb4 protein_coding retained_intron MGP_NODShiLtJ_T0001613.1 MGP_NODShiLtJ_G0001528.1 mouse_genomes_project 5 73858530 73859863 - TEC TEC MGP_NODShiLtJ_T0072267.1 MGP_NODShiLtJ_G0029547.1 mouse_genomes_project 5 105426035 105448284 - MGP_NODShiLtJ_P0072267 Naaa protein_coding protein_coding MGP_NODShiLtJ_T0072268.1 MGP_NODShiLtJ_G0029547.1 mouse_genomes_project 5 105426040 105431943 - Naaa protein_coding retained_intron MGP_NODShiLtJ_T0072269.1 MGP_NODShiLtJ_G0029547.1 mouse_genomes_project 5 105427677 105448279 - MGP_NODShiLtJ_P0072269 Naaa protein_coding protein_coding MGP_NODShiLtJ_T0072270.1 MGP_NODShiLtJ_G0029547.1 mouse_genomes_project 5 105428800 105442662 - MGP_NODShiLtJ_P0072270 Naaa protein_coding protein_coding MGP_NODShiLtJ_T0072271.1 MGP_NODShiLtJ_G0029547.1 mouse_genomes_project 5 105445932 105448279 - Naaa protein_coding retained_intron MGP_NODShiLtJ_T0101343.1 MGP_NODShiLtJ_G0039580.1 mouse_genomes_project 5 33936916 33943663 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101344.1 MGP_NODShiLtJ_G0039580.1 mouse_genomes_project 5 33936920 33943719 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0075319.1 MGP_NODShiLtJ_G0030130.1 mouse_genomes_project 5 162791354 162795952 - MGP_NODShiLtJ_P0075319 Zfp853 protein_coding protein_coding MGP_NODShiLtJ_T0074047.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141817972 141900190 - MGP_NODShiLtJ_P0074047 Mphosph9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0074048.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141817978 141900272 - MGP_NODShiLtJ_P0074048 Mphosph9 protein_coding protein_coding MGP_NODShiLtJ_T0074049.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141819688 141900149 - MGP_NODShiLtJ_P0074049 Mphosph9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074050.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141820688 141900152 - MGP_NODShiLtJ_P0074050 Mphosph9 protein_coding protein_coding MGP_NODShiLtJ_T0074051.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141821640 141828121 - Mphosph9 protein_coding processed_transcript MGP_NODShiLtJ_T0074052.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141826013 141832340 - Mphosph9 protein_coding processed_transcript MGP_NODShiLtJ_T0074053.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141827957 141830026 - Mphosph9 protein_coding processed_transcript MGP_NODShiLtJ_T0074054.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141828958 141830397 - Mphosph9 protein_coding retained_intron MGP_NODShiLtJ_T0074055.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141860250 141900170 - MGP_NODShiLtJ_P0074055 Mphosph9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074056.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141868599 141897427 - MGP_NODShiLtJ_P0074056 Mphosph9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074057.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141886658 141900272 - Mphosph9 protein_coding processed_transcript MGP_NODShiLtJ_T0074058.1 MGP_NODShiLtJ_G0029891.1 mouse_genomes_project 5 141886658 141900152 - Mphosph9 protein_coding processed_transcript MGP_NODShiLtJ_T0001433.1 MGP_NODShiLtJ_G0001352.1 mouse_genomes_project 5 19300177 19303298 - TEC TEC MGP_NODShiLtJ_T0004573.1 MGP_NODShiLtJ_G0003959.1 mouse_genomes_project 5 407752 409697 - 4833413G10Rik antisense antisense MGP_NODShiLtJ_T0075159.1 MGP_NODShiLtJ_G0030093.1 mouse_genomes_project 5 158971497 158982690 + MGP_NODShiLtJ_P0075159 Mafk protein_coding protein_coding MGP_NODShiLtJ_T0075160.1 MGP_NODShiLtJ_G0030093.1 mouse_genomes_project 5 158971518 158979537 + Mafk protein_coding processed_transcript MGP_NODShiLtJ_T0075161.1 MGP_NODShiLtJ_G0030093.1 mouse_genomes_project 5 158977490 158982368 + MGP_NODShiLtJ_P0075161 Mafk protein_coding protein_coding MGP_NODShiLtJ_T0071409.1 MGP_NODShiLtJ_G0029364.1 mouse_genomes_project 5 69836896 69927068 + MGP_NODShiLtJ_P0071409 Dthd1 protein_coding protein_coding MGP_NODShiLtJ_T0101973.1 MGP_NODShiLtJ_G0040141.1 mouse_genomes_project 5 172135491 172174931 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0070230.1 MGP_NODShiLtJ_G0029169.1 mouse_genomes_project 5 28847024 28863333 + MGP_NODShiLtJ_P0070230 Htr5a protein_coding protein_coding MGP_NODShiLtJ_T0073366.1 MGP_NODShiLtJ_G0029775.1 mouse_genomes_project 5 132119217 132137731 + MGP_NODShiLtJ_P0073366 Rab35 protein_coding protein_coding MGP_NODShiLtJ_T0073367.1 MGP_NODShiLtJ_G0029775.1 mouse_genomes_project 5 132127541 132136114 + MGP_NODShiLtJ_P0073367 Rab35 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071851.1 MGP_NODShiLtJ_G0029438.1 mouse_genomes_project 5 84017566 84019859 + MGP_NODShiLtJ_P0071851 Gsx2 protein_coding protein_coding MGP_NODShiLtJ_T0071852.1 MGP_NODShiLtJ_G0029438.1 mouse_genomes_project 5 84017567 84019591 + MGP_NODShiLtJ_P0071852 Gsx2 protein_coding protein_coding MGP_NODShiLtJ_T0008008.1 MGP_NODShiLtJ_G0006526.1 mouse_genomes_project 5 31052628 31060391 - Gm42450 lincRNA lincRNA MGP_NODShiLtJ_T0004679.1 MGP_NODShiLtJ_G0004047.1 mouse_genomes_project 5 112371499 112374351 - A730035I17Rik antisense antisense MGP_NODShiLtJ_T0004680.1 MGP_NODShiLtJ_G0004047.1 mouse_genomes_project 5 112371515 112373577 - A730035I17Rik antisense antisense MGP_NODShiLtJ_T0004681.1 MGP_NODShiLtJ_G0004047.1 mouse_genomes_project 5 112372402 112374149 - A730035I17Rik antisense antisense MGP_NODShiLtJ_T0004682.1 MGP_NODShiLtJ_G0004047.1 mouse_genomes_project 5 112372825 112373580 - A730035I17Rik antisense antisense MGP_NODShiLtJ_T0004683.1 MGP_NODShiLtJ_G0004047.1 mouse_genomes_project 5 112373662 112374351 - A730035I17Rik antisense pseudogene MGP_NODShiLtJ_T0017985.1 MGP_NODShiLtJ_G0015460.1 mouse_genomes_project 5 38477088 38509313 - Gm42936 processed_transcript processed_transcript MGP_NODShiLtJ_T0018008.1 MGP_NODShiLtJ_G0015468.1 mouse_genomes_project 5 75061812 75069910 + C330024D21Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018009.1 MGP_NODShiLtJ_G0015468.1 mouse_genomes_project 5 75061815 75076679 + C330024D21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018010.1 MGP_NODShiLtJ_G0015468.1 mouse_genomes_project 5 75061818 75076345 + C330024D21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0008210.1 MGP_NODShiLtJ_G0006676.1 mouse_genomes_project 5 127622206 127628713 + C130026L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0008211.1 MGP_NODShiLtJ_G0006676.1 mouse_genomes_project 5 127622345 127627921 + C130026L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0008212.1 MGP_NODShiLtJ_G0006676.1 mouse_genomes_project 5 127622352 127623658 + C130026L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0008213.1 MGP_NODShiLtJ_G0006676.1 mouse_genomes_project 5 127623215 127650557 + C130026L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0073409.1 MGP_NODShiLtJ_G0029780.1 mouse_genomes_project 5 132701152 132882491 - MGP_NODShiLtJ_P0073409 Ccdc60 protein_coding protein_coding MGP_NODShiLtJ_T0073410.1 MGP_NODShiLtJ_G0029780.1 mouse_genomes_project 5 132749659 132882469 - MGP_NODShiLtJ_P0073410 Ccdc60 protein_coding protein_coding MGP_NODShiLtJ_T0015017.1 MGP_NODShiLtJ_G0013125.1 mouse_genomes_project 5 131184895 131185515 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073024.1 MGP_NODShiLtJ_G0029708.1 mouse_genomes_project 5 128477373 128479606 - MGP_NODShiLtJ_P0073024 Gm6583 protein_coding protein_coding MGP_NODShiLtJ_T0069877.1 MGP_NODShiLtJ_G0029102.1 mouse_genomes_project 5 13118174 13385805 + Sema3e protein_coding retained_intron MGP_NODShiLtJ_T0069878.1 MGP_NODShiLtJ_G0029102.1 mouse_genomes_project 5 13118174 13389077 + MGP_NODShiLtJ_P0069878 Sema3e protein_coding protein_coding MGP_NODShiLtJ_T0069879.1 MGP_NODShiLtJ_G0029102.1 mouse_genomes_project 5 13357738 13359588 + Sema3e protein_coding retained_intron MGP_NODShiLtJ_T0014892.1 MGP_NODShiLtJ_G0013000.1 mouse_genomes_project 5 71458275 71459088 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073185.1 MGP_NODShiLtJ_G0029739.1 mouse_genomes_project 5 130760118 130773081 - MGP_NODShiLtJ_P0073185 Mmab protein_coding protein_coding MGP_NODShiLtJ_T0073186.1 MGP_NODShiLtJ_G0029739.1 mouse_genomes_project 5 130762284 130773042 - MGP_NODShiLtJ_P0073186 Mmab protein_coding protein_coding MGP_NODShiLtJ_T0073187.1 MGP_NODShiLtJ_G0029739.1 mouse_genomes_project 5 130763712 130773013 - MGP_NODShiLtJ_P0073187 Mmab protein_coding protein_coding MGP_NODShiLtJ_T0070723.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35273016 35294313 - MGP_NODShiLtJ_P0070723 Slbp protein_coding protein_coding MGP_NODShiLtJ_T0070724.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35280058 35294542 - MGP_NODShiLtJ_P0070724 Slbp protein_coding protein_coding MGP_NODShiLtJ_T0070725.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35280058 35294274 - MGP_NODShiLtJ_P0070725 Slbp protein_coding protein_coding MGP_NODShiLtJ_T0070726.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35280083 35281741 - Slbp protein_coding retained_intron MGP_NODShiLtJ_T0070727.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35281519 35294306 - Slbp protein_coding retained_intron MGP_NODShiLtJ_T0070728.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35282800 35294268 - MGP_NODShiLtJ_P0070728 Slbp protein_coding protein_coding MGP_NODShiLtJ_T0070729.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35286198 35294264 - MGP_NODShiLtJ_P0070729 Slbp protein_coding protein_coding MGP_NODShiLtJ_T0070730.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35288756 35294321 - Slbp protein_coding retained_intron MGP_NODShiLtJ_T0070731.1 MGP_NODShiLtJ_G0029253.1 mouse_genomes_project 5 35293592 35294269 - Slbp protein_coding retained_intron MGP_NODShiLtJ_T0001609.1 MGP_NODShiLtJ_G0001524.1 mouse_genomes_project 5 73549079 73552464 - TEC TEC MGP_NODShiLtJ_T0004578.1 MGP_NODShiLtJ_G0003964.1 mouse_genomes_project 5 13980647 13992455 - antisense antisense MGP_NODShiLtJ_T0001579.1 MGP_NODShiLtJ_G0001495.1 mouse_genomes_project 5 63442262 63447772 + TEC TEC MGP_NODShiLtJ_T0008347.1 MGP_NODShiLtJ_G0006761.1 mouse_genomes_project 5 156217412 156218368 + 9130604C24Rik lincRNA lincRNA MGP_NODShiLtJ_T0071659.1 MGP_NODShiLtJ_G0029402.1 mouse_genomes_project 5 75577376 75613811 + MGP_NODShiLtJ_P0071659 Gm5108 protein_coding protein_coding MGP_NODShiLtJ_T0071660.1 MGP_NODShiLtJ_G0029402.1 mouse_genomes_project 5 75577446 75613741 + Gm5108 protein_coding antisense MGP_NODShiLtJ_T0071661.1 MGP_NODShiLtJ_G0029402.1 mouse_genomes_project 5 75577446 75613746 + Gm5108 protein_coding antisense MGP_NODShiLtJ_T0074526.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153456247 153467957 - MGP_NODShiLtJ_P0074526 Wbscr22 protein_coding protein_coding MGP_NODShiLtJ_T0074527.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153456247 153460218 - MGP_NODShiLtJ_P0074527 Wbscr22 protein_coding protein_coding MGP_NODShiLtJ_T0074528.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153456249 153468250 - MGP_NODShiLtJ_P0074528 Wbscr22 protein_coding protein_coding MGP_NODShiLtJ_T0074529.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153456249 153467369 - MGP_NODShiLtJ_P0074529 Wbscr22 protein_coding protein_coding MGP_NODShiLtJ_T0074530.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153456575 153467330 - MGP_NODShiLtJ_P0074530 Wbscr22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074531.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153456577 153460018 - Wbscr22 protein_coding retained_intron MGP_NODShiLtJ_T0074532.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153456623 153460310 - Wbscr22 protein_coding retained_intron MGP_NODShiLtJ_T0074533.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153456903 153460204 - Wbscr22 protein_coding retained_intron MGP_NODShiLtJ_T0074534.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153459339 153464760 - Wbscr22 protein_coding processed_transcript MGP_NODShiLtJ_T0074535.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153459770 153467339 - Wbscr22 protein_coding retained_intron MGP_NODShiLtJ_T0074536.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153460176 153464632 - Wbscr22 protein_coding retained_intron MGP_NODShiLtJ_T0074537.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153462485 153467055 - MGP_NODShiLtJ_P0074537 Wbscr22 protein_coding protein_coding MGP_NODShiLtJ_T0074538.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153464551 153467381 - MGP_NODShiLtJ_P0074538 Wbscr22 protein_coding protein_coding MGP_NODShiLtJ_T0074539.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153467027 153467370 - Wbscr22 protein_coding processed_transcript MGP_NODShiLtJ_T0074540.1 MGP_NODShiLtJ_G0029973.1 mouse_genomes_project 5 153467447 153467940 - MGP_NODShiLtJ_P0074540 Wbscr22 protein_coding protein_coding MGP_NODShiLtJ_T0074307.1 MGP_NODShiLtJ_G0029939.1 mouse_genomes_project 5 148008897 148022923 - MGP_NODShiLtJ_P0074307 Gusb protein_coding protein_coding MGP_NODShiLtJ_T0074308.1 MGP_NODShiLtJ_G0029939.1 mouse_genomes_project 5 148008909 148022702 - MGP_NODShiLtJ_P0074308 Gusb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074309.1 MGP_NODShiLtJ_G0029939.1 mouse_genomes_project 5 148009467 148010529 - Gusb protein_coding retained_intron MGP_NODShiLtJ_T0074310.1 MGP_NODShiLtJ_G0029939.1 mouse_genomes_project 5 148018519 148022739 - MGP_NODShiLtJ_P0074310 Gusb protein_coding protein_coding MGP_NODShiLtJ_T0074311.1 MGP_NODShiLtJ_G0029939.1 mouse_genomes_project 5 148019459 148022755 - MGP_NODShiLtJ_P0074311 Gusb protein_coding protein_coding MGP_NODShiLtJ_T0074312.1 MGP_NODShiLtJ_G0029939.1 mouse_genomes_project 5 148019482 148022839 - Gusb protein_coding retained_intron MGP_NODShiLtJ_T0001808.1 MGP_NODShiLtJ_G0001721.1 mouse_genomes_project 5 149162666 149164301 - TEC TEC MGP_NODShiLtJ_T0014886.1 MGP_NODShiLtJ_G0012994.1 mouse_genomes_project 5 71255700 71256183 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014891.1 MGP_NODShiLtJ_G0012999.1 mouse_genomes_project 5 71458224 71459173 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011489.1 MGP_NODShiLtJ_G0009622.1 mouse_genomes_project 5 114901765 114901839 + Gm27553 misc_RNA misc_RNA MGP_NODShiLtJ_T0074912.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156486737 156511138 + MGP_NODShiLtJ_P0074912 Tsc22d4 protein_coding protein_coding MGP_NODShiLtJ_T0074913.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156486966 156493165 + Tsc22d4 protein_coding retained_intron MGP_NODShiLtJ_T0074914.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156487003 156501853 + MGP_NODShiLtJ_P0074914 Tsc22d4 protein_coding protein_coding MGP_NODShiLtJ_T0074915.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156491618 156499345 + Tsc22d4 protein_coding retained_intron MGP_NODShiLtJ_T0074916.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156498591 156499995 + MGP_NODShiLtJ_P0074916 Tsc22d4 protein_coding protein_coding MGP_NODShiLtJ_T0074917.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156498631 156499879 + MGP_NODShiLtJ_P0074917 Tsc22d4 protein_coding protein_coding MGP_NODShiLtJ_T0074918.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156502143 156511044 + MGP_NODShiLtJ_P0074918 Tsc22d4 protein_coding protein_coding MGP_NODShiLtJ_T0074919.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156502154 156511044 + MGP_NODShiLtJ_P0074919 Tsc22d4 protein_coding protein_coding MGP_NODShiLtJ_T0074920.1 MGP_NODShiLtJ_G0030044.1 mouse_genomes_project 5 156510341 156510934 + Tsc22d4 protein_coding processed_transcript MGP_NODShiLtJ_T0099338.1 MGP_NODShiLtJ_G0037732.1 mouse_genomes_project 5 23170459 23170524 - Gm24512 snRNA snRNA MGP_NODShiLtJ_T0014992.1 MGP_NODShiLtJ_G0013100.1 mouse_genomes_project 5 123139038 123139380 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004605.1 MGP_NODShiLtJ_G0003986.1 mouse_genomes_project 5 35831039 35848579 + 4930557J02Rik antisense antisense MGP_NODShiLtJ_T0008184.1 MGP_NODShiLtJ_G0006659.1 mouse_genomes_project 5 121562916 121565205 - 4930432H08Rik lincRNA lincRNA MGP_NODShiLtJ_T0014782.1 MGP_NODShiLtJ_G0012890.1 mouse_genomes_project 5 24018501 24019126 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014960.1 MGP_NODShiLtJ_G0013068.1 mouse_genomes_project 5 106453938 106454320 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069967.1 MGP_NODShiLtJ_G0029119.1 mouse_genomes_project 5 21950685 22120049 - MGP_NODShiLtJ_P0069967 Fbxl13 protein_coding protein_coding MGP_NODShiLtJ_T0069968.1 MGP_NODShiLtJ_G0029119.1 mouse_genomes_project 5 21957038 22120031 - Fbxl13 protein_coding retained_intron MGP_NODShiLtJ_T0069969.1 MGP_NODShiLtJ_G0029119.1 mouse_genomes_project 5 21989557 22119999 - MGP_NODShiLtJ_P0069969 Fbxl13 protein_coding protein_coding MGP_NODShiLtJ_T0069972.1 MGP_NODShiLtJ_G0029119.1 mouse_genomes_project 5 22051548 22055661 - Fbxl13 protein_coding processed_transcript MGP_NODShiLtJ_T0069973.1 MGP_NODShiLtJ_G0029119.1 mouse_genomes_project 5 22117993 22120078 - Fbxl13 protein_coding retained_intron MGP_NODShiLtJ_T0071403.1 MGP_NODShiLtJ_G0029363.1 mouse_genomes_project 5 69581928 69591864 - Arap2 protein_coding retained_intron MGP_NODShiLtJ_T0071404.1 MGP_NODShiLtJ_G0029363.1 mouse_genomes_project 5 69581928 69782832 - MGP_NODShiLtJ_P0071404 Arap2 protein_coding protein_coding MGP_NODShiLtJ_T0071405.1 MGP_NODShiLtJ_G0029363.1 mouse_genomes_project 5 69621836 69625390 - Arap2 protein_coding retained_intron MGP_NODShiLtJ_T0071406.1 MGP_NODShiLtJ_G0029363.1 mouse_genomes_project 5 69629748 69633784 - Arap2 protein_coding retained_intron MGP_NODShiLtJ_T0071407.1 MGP_NODShiLtJ_G0029363.1 mouse_genomes_project 5 69667652 69674015 - Arap2 protein_coding retained_intron MGP_NODShiLtJ_T0071408.1 MGP_NODShiLtJ_G0029363.1 mouse_genomes_project 5 69697694 69724744 - Arap2 protein_coding processed_transcript MGP_NODShiLtJ_T0014829.1 MGP_NODShiLtJ_G0012937.1 mouse_genomes_project 5 35805145 35805476 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072391.1 MGP_NODShiLtJ_G0029569.1 mouse_genomes_project 5 111135882 111167363 - MGP_NODShiLtJ_P0072391 Paqr3 protein_coding protein_coding MGP_NODShiLtJ_T0072392.1 MGP_NODShiLtJ_G0029569.1 mouse_genomes_project 5 111140606 111167341 - MGP_NODShiLtJ_P0072392 Paqr3 protein_coding protein_coding MGP_NODShiLtJ_T0072393.1 MGP_NODShiLtJ_G0029569.1 mouse_genomes_project 5 111151172 111153010 - Paqr3 protein_coding retained_intron MGP_NODShiLtJ_T0072394.1 MGP_NODShiLtJ_G0029569.1 mouse_genomes_project 5 111152762 111167212 - MGP_NODShiLtJ_P0072394 Paqr3 protein_coding protein_coding MGP_NODShiLtJ_T0072395.1 MGP_NODShiLtJ_G0029569.1 mouse_genomes_project 5 111157939 111167363 - MGP_NODShiLtJ_P0072395 Paqr3 protein_coding protein_coding MGP_NODShiLtJ_T0072396.1 MGP_NODShiLtJ_G0029569.1 mouse_genomes_project 5 111160378 111167351 - Paqr3 protein_coding retained_intron MGP_NODShiLtJ_T0073561.1 MGP_NODShiLtJ_G0029813.1 mouse_genomes_project 5 137739213 137758491 - MGP_NODShiLtJ_P0073561 Oas2 protein_coding protein_coding MGP_NODShiLtJ_T0073562.1 MGP_NODShiLtJ_G0029813.1 mouse_genomes_project 5 137739214 137758491 - MGP_NODShiLtJ_P0073562 Oas2 protein_coding protein_coding MGP_NODShiLtJ_T0073563.1 MGP_NODShiLtJ_G0029813.1 mouse_genomes_project 5 137739216 137744464 - Oas2 protein_coding retained_intron MGP_NODShiLtJ_T0073564.1 MGP_NODShiLtJ_G0029813.1 mouse_genomes_project 5 137742164 137747281 - MGP_NODShiLtJ_P0073564 Oas2 protein_coding protein_coding MGP_NODShiLtJ_T0101963.1 MGP_NODShiLtJ_G0040131.1 mouse_genomes_project 5 143501408 143502073 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0074434.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682503 152788206 - MGP_NODShiLtJ_P0074434 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074435.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682503 152787746 - MGP_NODShiLtJ_P0074435 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074436.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682508 152788178 - MGP_NODShiLtJ_P0074436 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074437.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682510 152689449 - MGP_NODShiLtJ_P0074437 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074438.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682516 152788206 - MGP_NODShiLtJ_P0074438 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074439.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682526 152788066 - MGP_NODShiLtJ_P0074439 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074440.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682526 152788066 - MGP_NODShiLtJ_P0074440 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074441.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682526 152788074 - MGP_NODShiLtJ_P0074441 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074442.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682544 152788079 - MGP_NODShiLtJ_P0074442 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074443.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152682633 152703144 - MGP_NODShiLtJ_P0074443 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074444.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152683420 152788066 - MGP_NODShiLtJ_P0074444 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074445.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152683420 152788079 - MGP_NODShiLtJ_P0074445 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074446.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152683482 152788182 - MGP_NODShiLtJ_P0074446 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074447.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152683501 152788076 - MGP_NODShiLtJ_P0074447 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074448.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152685075 152687124 - Gtf2ird1 protein_coding retained_intron MGP_NODShiLtJ_T0074449.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152685138 152711956 - MGP_NODShiLtJ_P0074449 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074450.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152687813 152715356 - MGP_NODShiLtJ_P0074450 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074451.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152689506 152715335 - MGP_NODShiLtJ_P0074451 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074452.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152701593 152787767 - Gtf2ird1 protein_coding retained_intron MGP_NODShiLtJ_T0074453.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152709467 152723111 - MGP_NODShiLtJ_P0074453 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074454.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152709467 152723111 - MGP_NODShiLtJ_P0074454 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074455.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152709676 152711387 - Gtf2ird1 protein_coding retained_intron MGP_NODShiLtJ_T0074456.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152709679 152723111 - MGP_NODShiLtJ_P0074456 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074457.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152710663 152723111 - MGP_NODShiLtJ_P0074457 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074458.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152711704 152723015 - Gtf2ird1 protein_coding retained_intron MGP_NODShiLtJ_T0074459.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152711820 152729501 - Gtf2ird1 protein_coding retained_intron MGP_NODShiLtJ_T0074460.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152717703 152743839 - MGP_NODShiLtJ_P0074460 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0074461.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152730215 152788169 - Gtf2ird1 protein_coding retained_intron MGP_NODShiLtJ_T0074462.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152732108 152788164 - Gtf2ird1 protein_coding processed_transcript MGP_NODShiLtJ_T0074463.1 MGP_NODShiLtJ_G0029958.1 mouse_genomes_project 5 152738389 152787440 - MGP_NODShiLtJ_P0074463 Gtf2ird1 protein_coding protein_coding MGP_NODShiLtJ_T0001615.1 MGP_NODShiLtJ_G0001530.1 mouse_genomes_project 5 73961756 73962382 - TEC TEC MGP_NODShiLtJ_T0014823.1 MGP_NODShiLtJ_G0012931.1 mouse_genomes_project 5 34720062 34720522 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008192.1 MGP_NODShiLtJ_G0006666.1 mouse_genomes_project 5 122983651 122988996 - 4930428O21Rik lincRNA lincRNA MGP_NODShiLtJ_T0072993.1 MGP_NODShiLtJ_G0029700.1 mouse_genomes_project 5 127441306 127442018 + Mn1 protein_coding processed_transcript MGP_NODShiLtJ_T0072994.1 MGP_NODShiLtJ_G0029700.1 mouse_genomes_project 5 127441386 127485156 + MGP_NODShiLtJ_P0072994 Mn1 protein_coding protein_coding MGP_NODShiLtJ_T0070998.1 MGP_NODShiLtJ_G0029293.1 mouse_genomes_project 5 38353677 38365521 - MGP_NODShiLtJ_P0070998 Tada2b protein_coding protein_coding MGP_NODShiLtJ_T0070999.1 MGP_NODShiLtJ_G0029293.1 mouse_genomes_project 5 38356722 38365087 - MGP_NODShiLtJ_P0070999 Tada2b protein_coding protein_coding MGP_NODShiLtJ_T0001741.1 MGP_NODShiLtJ_G0001655.1 mouse_genomes_project 5 133122894 133124230 - TEC TEC MGP_NODShiLtJ_T0075179.1 MGP_NODShiLtJ_G0030099.1 mouse_genomes_project 5 159550886 159568371 + MGP_NODShiLtJ_P0075179 Nudt1 protein_coding protein_coding MGP_NODShiLtJ_T0075181.1 MGP_NODShiLtJ_G0030099.1 mouse_genomes_project 5 159562598 159568876 + MGP_NODShiLtJ_P0075181 Nudt1 protein_coding protein_coding MGP_NODShiLtJ_T0075182.1 MGP_NODShiLtJ_G0030099.1 mouse_genomes_project 5 159562647 159568876 + MGP_NODShiLtJ_P0075182 Nudt1 protein_coding protein_coding MGP_NODShiLtJ_T0075183.1 MGP_NODShiLtJ_G0030099.1 mouse_genomes_project 5 159562692 159568680 + MGP_NODShiLtJ_P0075183 Nudt1 protein_coding protein_coding MGP_NODShiLtJ_T0075184.1 MGP_NODShiLtJ_G0030099.1 mouse_genomes_project 5 159563133 159568547 + MGP_NODShiLtJ_P0075184 Nudt1 protein_coding protein_coding MGP_NODShiLtJ_T0075185.1 MGP_NODShiLtJ_G0030099.1 mouse_genomes_project 5 159563162 159566435 + MGP_NODShiLtJ_P0075185 Nudt1 protein_coding protein_coding MGP_NODShiLtJ_T0075186.1 MGP_NODShiLtJ_G0030099.1 mouse_genomes_project 5 159565312 159566551 + Nudt1 protein_coding processed_transcript MGP_NODShiLtJ_T0014776.1 MGP_NODShiLtJ_G0012884.1 mouse_genomes_project 5 23504546 23505163 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001815.1 MGP_NODShiLtJ_G0001728.1 mouse_genomes_project 5 150056506 150059482 - TEC TEC MGP_NODShiLtJ_T0099380.1 MGP_NODShiLtJ_G0037774.1 mouse_genomes_project 5 118635426 118635533 + Gm24897 snRNA snRNA MGP_NODShiLtJ_T0004677.1 MGP_NODShiLtJ_G0004045.1 mouse_genomes_project 5 110446592 110447947 - Gm33050 antisense antisense MGP_NODShiLtJ_T0008263.1 MGP_NODShiLtJ_G0006708.1 mouse_genomes_project 5 135798602 135806399 + Gm43342 lincRNA lincRNA MGP_NODShiLtJ_T0100608.1 MGP_NODShiLtJ_G0039002.1 mouse_genomes_project 5 58923666 58923795 + Gm24235 snoRNA snoRNA MGP_NODShiLtJ_T0014865.1 MGP_NODShiLtJ_G0012973.1 mouse_genomes_project 5 60759910 60760223 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008369.1 MGP_NODShiLtJ_G0006780.1 mouse_genomes_project 5 167414388 167414932 + Gm27033 lincRNA lincRNA MGP_NODShiLtJ_T0004676.1 MGP_NODShiLtJ_G0004044.1 mouse_genomes_project 5 105460163 105475776 + Gm43599 antisense antisense MGP_NODShiLtJ_T0004585.1 MGP_NODShiLtJ_G0003970.1 mouse_genomes_project 5 23810855 23833663 - Gm42948 antisense antisense MGP_NODShiLtJ_T0073099.1 MGP_NODShiLtJ_G0029724.1 mouse_genomes_project 5 130037190 130044167 + MGP_NODShiLtJ_P0073099 Iscu protein_coding protein_coding MGP_NODShiLtJ_T0073100.1 MGP_NODShiLtJ_G0029724.1 mouse_genomes_project 5 130037190 130042186 + MGP_NODShiLtJ_P0073100 Iscu protein_coding protein_coding MGP_NODShiLtJ_T0073101.1 MGP_NODShiLtJ_G0029724.1 mouse_genomes_project 5 130037205 130041427 + MGP_NODShiLtJ_P0073101 Iscu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073102.1 MGP_NODShiLtJ_G0029724.1 mouse_genomes_project 5 130037392 130042402 + MGP_NODShiLtJ_P0073102 Iscu protein_coding protein_coding MGP_NODShiLtJ_T0073103.1 MGP_NODShiLtJ_G0029724.1 mouse_genomes_project 5 130037412 130042333 + MGP_NODShiLtJ_P0073103 Iscu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073104.1 MGP_NODShiLtJ_G0029724.1 mouse_genomes_project 5 130038233 130042229 + MGP_NODShiLtJ_P0073104 Iscu protein_coding protein_coding MGP_NODShiLtJ_T0073888.1 MGP_NODShiLtJ_G0029867.1 mouse_genomes_project 5 140599447 140611204 - MGP_NODShiLtJ_P0073888 Hpd protein_coding protein_coding MGP_NODShiLtJ_T0073889.1 MGP_NODShiLtJ_G0029867.1 mouse_genomes_project 5 140599512 140600565 - Hpd protein_coding processed_transcript MGP_NODShiLtJ_T0073890.1 MGP_NODShiLtJ_G0029867.1 mouse_genomes_project 5 140599741 140603567 - MGP_NODShiLtJ_P0073890 Hpd protein_coding protein_coding MGP_NODShiLtJ_T0073891.1 MGP_NODShiLtJ_G0029867.1 mouse_genomes_project 5 140605180 140611199 - Hpd protein_coding retained_intron MGP_NODShiLtJ_T0073892.1 MGP_NODShiLtJ_G0029867.1 mouse_genomes_project 5 140605180 140611200 - MGP_NODShiLtJ_P0073892 Hpd protein_coding protein_coding MGP_NODShiLtJ_T0073893.1 MGP_NODShiLtJ_G0029867.1 mouse_genomes_project 5 140609135 140610544 - Hpd protein_coding processed_transcript MGP_NODShiLtJ_T0008410.1 MGP_NODShiLtJ_G0006809.1 mouse_genomes_project 5 171437163 171457166 - Gm43298 lincRNA lincRNA MGP_NODShiLtJ_T0004744.1 MGP_NODShiLtJ_G0004089.1 mouse_genomes_project 5 134838584 134842935 + Gm9754 antisense antisense MGP_NODShiLtJ_T0072626.1 MGP_NODShiLtJ_G0029626.1 mouse_genomes_project 5 120565101 120637833 + MGP_NODShiLtJ_P0072626 Lrrc8b protein_coding protein_coding MGP_NODShiLtJ_T0001498.1 MGP_NODShiLtJ_G0001414.1 mouse_genomes_project 5 46905325 46908756 - TEC TEC MGP_NODShiLtJ_T0074642.1 MGP_NODShiLtJ_G0029996.1 mouse_genomes_project 5 154471865 154487263 - MGP_NODShiLtJ_P0074642 Ssc4d protein_coding protein_coding MGP_NODShiLtJ_T0074643.1 MGP_NODShiLtJ_G0029996.1 mouse_genomes_project 5 154471877 154487229 - MGP_NODShiLtJ_P0074643 Ssc4d protein_coding protein_coding MGP_NODShiLtJ_T0074644.1 MGP_NODShiLtJ_G0029996.1 mouse_genomes_project 5 154471878 154473983 - MGP_NODShiLtJ_P0074644 Ssc4d protein_coding protein_coding MGP_NODShiLtJ_T0074645.1 MGP_NODShiLtJ_G0029996.1 mouse_genomes_project 5 154472481 154473931 - MGP_NODShiLtJ_P0074645 Ssc4d protein_coding protein_coding MGP_NODShiLtJ_T0074646.1 MGP_NODShiLtJ_G0029996.1 mouse_genomes_project 5 154475833 154478511 - MGP_NODShiLtJ_P0074646 Ssc4d protein_coding protein_coding MGP_NODShiLtJ_T0074647.1 MGP_NODShiLtJ_G0029996.1 mouse_genomes_project 5 154476043 154480630 - MGP_NODShiLtJ_P0074647 Ssc4d protein_coding protein_coding MGP_NODShiLtJ_T0074648.1 MGP_NODShiLtJ_G0029996.1 mouse_genomes_project 5 154478775 154487172 - MGP_NODShiLtJ_P0074648 Ssc4d protein_coding protein_coding MGP_NODShiLtJ_T0075197.1 MGP_NODShiLtJ_G0030104.1 mouse_genomes_project 5 159841383 159843330 - MGP_NODShiLtJ_P0075197 Grifin protein_coding protein_coding MGP_NODShiLtJ_T0073163.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130611794 130692340 + MGP_NODShiLtJ_P0073163 Myo1h protein_coding protein_coding MGP_NODShiLtJ_T0073164.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130638350 130692119 + MGP_NODShiLtJ_P0073164 Myo1h protein_coding protein_coding MGP_NODShiLtJ_T0073165.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130638350 130693681 + MGP_NODShiLtJ_P0073165 Myo1h protein_coding protein_coding MGP_NODShiLtJ_T0073166.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130685906 130693681 + Myo1h protein_coding retained_intron MGP_NODShiLtJ_T0073167.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130685954 130692425 + Myo1h protein_coding retained_intron MGP_NODShiLtJ_T0073168.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130685954 130692425 + MGP_NODShiLtJ_P0073168 Myo1h protein_coding protein_coding MGP_NODShiLtJ_T0073169.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130685954 130692425 + MGP_NODShiLtJ_P0073169 Myo1h protein_coding protein_coding MGP_NODShiLtJ_T0073170.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130685954 130692425 + MGP_NODShiLtJ_P0073170 Myo1h protein_coding protein_coding MGP_NODShiLtJ_T0073171.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130686497 130688827 + Myo1h protein_coding retained_intron MGP_NODShiLtJ_T0073172.1 MGP_NODShiLtJ_G0029736.1 mouse_genomes_project 5 130692519 130694462 + Myo1h protein_coding processed_transcript MGP_NODShiLtJ_T0075620.1 MGP_NODShiLtJ_G0030200.1 mouse_genomes_project 5 168071477 168073672 + Pomp protein_coding retained_intron MGP_NODShiLtJ_T0075621.1 MGP_NODShiLtJ_G0030200.1 mouse_genomes_project 5 168071493 168083873 + MGP_NODShiLtJ_P0075621 Pomp protein_coding protein_coding MGP_NODShiLtJ_T0075622.1 MGP_NODShiLtJ_G0030200.1 mouse_genomes_project 5 168071529 168086345 + MGP_NODShiLtJ_P0075622 Pomp protein_coding protein_coding MGP_NODShiLtJ_T0075623.1 MGP_NODShiLtJ_G0030200.1 mouse_genomes_project 5 168081223 168086425 + Pomp protein_coding processed_transcript MGP_NODShiLtJ_T0075624.1 MGP_NODShiLtJ_G0030200.1 mouse_genomes_project 5 168083243 168086383 + Pomp protein_coding retained_intron MGP_NODShiLtJ_T0010582.1 MGP_NODShiLtJ_G0008715.1 mouse_genomes_project 5 74597865 74597979 - Gm23841 miRNA miRNA MGP_NODShiLtJ_T0004619.1 MGP_NODShiLtJ_G0003999.1 mouse_genomes_project 5 45751613 45847138 - Gm7854 antisense antisense MGP_NODShiLtJ_T0004620.1 MGP_NODShiLtJ_G0003999.1 mouse_genomes_project 5 45751613 45846768 - Gm7854 antisense antisense MGP_NODShiLtJ_T0004621.1 MGP_NODShiLtJ_G0003999.1 mouse_genomes_project 5 45846784 45847135 - Gm7854 antisense antisense MGP_NODShiLtJ_T0098040.1 MGP_NODShiLtJ_G0036452.1 mouse_genomes_project 5 334048 334168 + n-R5s169 rRNA rRNA MGP_NODShiLtJ_T0001836.1 MGP_NODShiLtJ_G0001748.1 mouse_genomes_project 5 152577988 152581656 - TEC TEC MGP_NODShiLtJ_T0071534.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73211605 73286873 + MGP_NODShiLtJ_P0071534 N4bp2 protein_coding protein_coding MGP_NODShiLtJ_T0071535.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73213057 73240212 + N4bp2 protein_coding processed_transcript MGP_NODShiLtJ_T0071536.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73213057 73226539 + N4bp2 protein_coding retained_intron MGP_NODShiLtJ_T0071537.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73213198 73273056 + MGP_NODShiLtJ_P0071537 N4bp2 protein_coding protein_coding MGP_NODShiLtJ_T0071538.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73213305 73286880 + MGP_NODShiLtJ_P0071538 N4bp2 protein_coding protein_coding MGP_NODShiLtJ_T0071539.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73236900 73239054 + N4bp2 protein_coding retained_intron MGP_NODShiLtJ_T0071540.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73256783 73259932 + N4bp2 protein_coding retained_intron MGP_NODShiLtJ_T0071541.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73265456 73270779 + N4bp2 protein_coding retained_intron MGP_NODShiLtJ_T0071542.1 MGP_NODShiLtJ_G0029386.1 mouse_genomes_project 5 73281019 73282652 + N4bp2 protein_coding retained_intron MGP_NODShiLtJ_T0100610.1 MGP_NODShiLtJ_G0039004.1 mouse_genomes_project 5 62176226 62176349 + Gm24902 snoRNA snoRNA MGP_NODShiLtJ_T0014754.1 MGP_NODShiLtJ_G0012862.1 mouse_genomes_project 5 18856900 18857498 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004787.1 MGP_NODShiLtJ_G0004117.1 mouse_genomes_project 5 146651129 146664527 + Gm42875 antisense antisense MGP_NODShiLtJ_T0074297.1 MGP_NODShiLtJ_G0029935.1 mouse_genomes_project 5 147862023 147878390 - MGP_NODShiLtJ_P0074297 Chchd2 protein_coding protein_coding MGP_NODShiLtJ_T0073340.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 131984871 132037476 + MGP_NODShiLtJ_P0073340 Pxn protein_coding protein_coding MGP_NODShiLtJ_T0073341.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 131984906 132037471 + Pxn protein_coding retained_intron MGP_NODShiLtJ_T0073342.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 131985003 132036467 + MGP_NODShiLtJ_P0073342 Pxn protein_coding protein_coding MGP_NODShiLtJ_T0073343.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 131985051 132030632 + MGP_NODShiLtJ_P0073343 Pxn protein_coding protein_coding MGP_NODShiLtJ_T0073344.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 131994548 132026376 + Pxn protein_coding processed_transcript MGP_NODShiLtJ_T0073345.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 131999597 132037471 + Pxn protein_coding processed_transcript MGP_NODShiLtJ_T0073346.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 132025439 132026905 + Pxn protein_coding processed_transcript MGP_NODShiLtJ_T0073347.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 132025577 132035990 + MGP_NODShiLtJ_P0073347 Pxn protein_coding protein_coding MGP_NODShiLtJ_T0073348.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 132025606 132026441 + Pxn protein_coding retained_intron MGP_NODShiLtJ_T0073349.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 132026288 132031249 + Pxn protein_coding retained_intron MGP_NODShiLtJ_T0073350.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 132026796 132027268 + Pxn protein_coding retained_intron MGP_NODShiLtJ_T0073351.1 MGP_NODShiLtJ_G0029772.1 mouse_genomes_project 5 132033427 132034281 + Pxn protein_coding retained_intron MGP_NODShiLtJ_T0014813.1 MGP_NODShiLtJ_G0012921.1 mouse_genomes_project 5 32616825 32617273 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018060.1 MGP_NODShiLtJ_G0015485.1 mouse_genomes_project 5 170312854 170329384 + 4930500F04Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018061.1 MGP_NODShiLtJ_G0015485.1 mouse_genomes_project 5 170313072 170329380 + 4930500F04Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018062.1 MGP_NODShiLtJ_G0015485.1 mouse_genomes_project 5 170317396 170319503 + 4930500F04Rik processed_transcript retained_intron MGP_NODShiLtJ_T0098427.1 MGP_NODShiLtJ_G0036828.1 mouse_genomes_project 5 171320017 171321798 + Gm43807 sense_intronic sense_intronic MGP_NODShiLtJ_T0008256.1 MGP_NODShiLtJ_G0006703.1 mouse_genomes_project 5 133289025 133495544 - Gm43122 lincRNA lincRNA MGP_NODShiLtJ_T0008258.1 MGP_NODShiLtJ_G0006703.1 mouse_genomes_project 5 133483071 133495578 - Gm43122 lincRNA lincRNA MGP_NODShiLtJ_T0008227.1 MGP_NODShiLtJ_G0006685.1 mouse_genomes_project 5 128330390 128331805 + lincRNA lincRNA MGP_NODShiLtJ_T0011478.1 MGP_NODShiLtJ_G0009611.1 mouse_genomes_project 5 6666094 6666223 - Gm27941 misc_RNA misc_RNA MGP_NODShiLtJ_T0004598.1 MGP_NODShiLtJ_G0003980.1 mouse_genomes_project 5 32356451 32358043 - Gm15469 antisense antisense MGP_NODShiLtJ_T0015087.1 MGP_NODShiLtJ_G0013195.1 mouse_genomes_project 5 165959375 165960256 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014858.1 MGP_NODShiLtJ_G0012966.1 mouse_genomes_project 5 56809495 56811765 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072193.1 MGP_NODShiLtJ_G0029524.1 mouse_genomes_project 5 103521254 103548386 + MGP_NODShiLtJ_P0072193 Afm protein_coding protein_coding MGP_NODShiLtJ_T0072194.1 MGP_NODShiLtJ_G0029524.1 mouse_genomes_project 5 103521271 103543898 + MGP_NODShiLtJ_P0072194 Afm protein_coding protein_coding MGP_NODShiLtJ_T0008338.1 MGP_NODShiLtJ_G0006755.1 mouse_genomes_project 5 153293507 153294360 + 4933439J24Rik lincRNA lincRNA MGP_NODShiLtJ_T0010564.1 MGP_NODShiLtJ_G0008697.1 mouse_genomes_project 5 30437768 30437887 - miRNA miRNA MGP_NODShiLtJ_T0008009.1 MGP_NODShiLtJ_G0006527.1 mouse_genomes_project 5 31176396 31187898 - Gm42806 lincRNA lincRNA MGP_NODShiLtJ_T0008010.1 MGP_NODShiLtJ_G0006527.1 mouse_genomes_project 5 31183686 31186865 - Gm42806 lincRNA lincRNA MGP_NODShiLtJ_T0001773.1 MGP_NODShiLtJ_G0001687.1 mouse_genomes_project 5 140292545 140294124 - TEC TEC MGP_NODShiLtJ_T0004809.1 MGP_NODShiLtJ_G0004136.1 mouse_genomes_project 5 157215959 157218578 + 6330418K02Rik antisense antisense MGP_NODShiLtJ_T0004810.1 MGP_NODShiLtJ_G0004136.1 mouse_genomes_project 5 157215970 157218249 + 6330418K02Rik antisense antisense MGP_NODShiLtJ_T0004811.1 MGP_NODShiLtJ_G0004136.1 mouse_genomes_project 5 157215985 157218578 + 6330418K02Rik antisense antisense MGP_NODShiLtJ_T0004812.1 MGP_NODShiLtJ_G0004136.1 mouse_genomes_project 5 157216024 157218146 + 6330418K02Rik antisense antisense MGP_NODShiLtJ_T0004813.1 MGP_NODShiLtJ_G0004136.1 mouse_genomes_project 5 157217460 157218000 + 6330418K02Rik antisense antisense MGP_NODShiLtJ_T0001807.1 MGP_NODShiLtJ_G0001720.1 mouse_genomes_project 5 149074332 149076264 - TEC TEC MGP_NODShiLtJ_T0071874.1 MGP_NODShiLtJ_G0029443.1 mouse_genomes_project 5 85142328 85160370 + MGP_NODShiLtJ_P0071874 Srd5a3 protein_coding protein_coding MGP_NODShiLtJ_T0071875.1 MGP_NODShiLtJ_G0029443.1 mouse_genomes_project 5 85142351 85154991 + Srd5a3 protein_coding retained_intron MGP_NODShiLtJ_T0071876.1 MGP_NODShiLtJ_G0029443.1 mouse_genomes_project 5 85142386 85142943 + Srd5a3 protein_coding processed_transcript MGP_NODShiLtJ_T0071877.1 MGP_NODShiLtJ_G0029443.1 mouse_genomes_project 5 85142780 85153274 + MGP_NODShiLtJ_P0071877 Srd5a3 protein_coding protein_coding MGP_NODShiLtJ_T0071878.1 MGP_NODShiLtJ_G0029443.1 mouse_genomes_project 5 85142810 85153466 + MGP_NODShiLtJ_P0071878 Srd5a3 protein_coding protein_coding MGP_NODShiLtJ_T0071879.1 MGP_NODShiLtJ_G0029443.1 mouse_genomes_project 5 85150159 85160139 + MGP_NODShiLtJ_P0071879 Srd5a3 protein_coding protein_coding MGP_NODShiLtJ_T0071880.1 MGP_NODShiLtJ_G0029443.1 mouse_genomes_project 5 85157718 85160399 + Srd5a3 protein_coding retained_intron MGP_NODShiLtJ_T0011496.1 MGP_NODShiLtJ_G0009629.1 mouse_genomes_project 5 127354302 127354462 - Gm27680 misc_RNA misc_RNA MGP_NODShiLtJ_T0074287.1 MGP_NODShiLtJ_G0029933.1 mouse_genomes_project 5 147806730 147828179 + MGP_NODShiLtJ_P0074287 Sumf2 protein_coding protein_coding MGP_NODShiLtJ_T0074288.1 MGP_NODShiLtJ_G0029933.1 mouse_genomes_project 5 147806755 147817723 + MGP_NODShiLtJ_P0074288 Sumf2 protein_coding protein_coding MGP_NODShiLtJ_T0074289.1 MGP_NODShiLtJ_G0029933.1 mouse_genomes_project 5 147806764 147817813 + Sumf2 protein_coding processed_transcript MGP_NODShiLtJ_T0074290.1 MGP_NODShiLtJ_G0029933.1 mouse_genomes_project 5 147806764 147827552 + MGP_NODShiLtJ_P0074290 Sumf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074291.1 MGP_NODShiLtJ_G0029933.1 mouse_genomes_project 5 147815487 147826919 + Sumf2 protein_coding processed_transcript MGP_NODShiLtJ_T0074292.1 MGP_NODShiLtJ_G0029933.1 mouse_genomes_project 5 147815487 147826919 + Sumf2 protein_coding processed_transcript MGP_NODShiLtJ_T0014995.1 MGP_NODShiLtJ_G0013103.1 mouse_genomes_project 5 123494247 123494832 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011498.1 MGP_NODShiLtJ_G0009631.1 mouse_genomes_project 5 128330070 128330144 - Gm27882 misc_RNA misc_RNA MGP_NODShiLtJ_T0075458.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164772470 164795873 + MGP_NODShiLtJ_P0075458 Arpc1b protein_coding protein_coding MGP_NODShiLtJ_T0075459.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164772513 164782162 + Arpc1b protein_coding processed_transcript MGP_NODShiLtJ_T0075460.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164772556 164783622 + Arpc1b protein_coding retained_intron MGP_NODShiLtJ_T0075461.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164772567 164787440 + MGP_NODShiLtJ_P0075461 Arpc1b protein_coding protein_coding MGP_NODShiLtJ_T0075462.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164772571 164782002 + MGP_NODShiLtJ_P0075462 Arpc1b protein_coding protein_coding MGP_NODShiLtJ_T0075463.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164783045 164786153 + MGP_NODShiLtJ_P0075463 Arpc1b protein_coding protein_coding MGP_NODShiLtJ_T0075464.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164783340 164785073 + Arpc1b protein_coding retained_intron MGP_NODShiLtJ_T0075465.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164783340 164786299 + Arpc1b protein_coding processed_transcript MGP_NODShiLtJ_T0075466.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164785257 164786697 + Arpc1b protein_coding retained_intron MGP_NODShiLtJ_T0075467.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164786124 164796880 + MGP_NODShiLtJ_P0075467 Arpc1b protein_coding protein_coding MGP_NODShiLtJ_T0075468.1 MGP_NODShiLtJ_G0030159.1 mouse_genomes_project 5 164786589 164787441 + Arpc1b protein_coding retained_intron MGP_NODShiLtJ_T0008282.1 MGP_NODShiLtJ_G0006724.1 mouse_genomes_project 5 140559450 140561439 + Gm38102 lincRNA lincRNA MGP_NODShiLtJ_T0008286.1 MGP_NODShiLtJ_G0006724.1 mouse_genomes_project 5 140561269 140563205 + Gm38102 lincRNA lincRNA MGP_NODShiLtJ_T0008281.1 MGP_NODShiLtJ_G0006723.1 mouse_genomes_project 5 140559234 140563619 - AI480526 lincRNA lincRNA MGP_NODShiLtJ_T0008283.1 MGP_NODShiLtJ_G0006723.1 mouse_genomes_project 5 140559800 140564858 - AI480526 lincRNA lincRNA MGP_NODShiLtJ_T0008284.1 MGP_NODShiLtJ_G0006723.1 mouse_genomes_project 5 140559971 140567497 - AI480526 lincRNA lincRNA MGP_NODShiLtJ_T0008285.1 MGP_NODShiLtJ_G0006723.1 mouse_genomes_project 5 140560351 140568087 - AI480526 lincRNA lincRNA MGP_NODShiLtJ_T0008287.1 MGP_NODShiLtJ_G0006723.1 mouse_genomes_project 5 140561735 140567510 - AI480526 lincRNA lincRNA MGP_NODShiLtJ_T0008288.1 MGP_NODShiLtJ_G0006723.1 mouse_genomes_project 5 140562980 140565800 - AI480526 lincRNA lincRNA MGP_NODShiLtJ_T0008289.1 MGP_NODShiLtJ_G0006723.1 mouse_genomes_project 5 140563552 140567488 - AI480526 lincRNA lincRNA MGP_NODShiLtJ_T0014913.1 MGP_NODShiLtJ_G0013021.1 mouse_genomes_project 5 84054255 84054544 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008006.1 MGP_NODShiLtJ_G0006524.1 mouse_genomes_project 5 29519511 29533759 + Gm26894 lincRNA lincRNA MGP_NODShiLtJ_T0074651.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154511298 154553233 + MGP_NODShiLtJ_P0074651 Dtx2 protein_coding protein_coding MGP_NODShiLtJ_T0074652.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154511309 154553225 + MGP_NODShiLtJ_P0074652 Dtx2 protein_coding protein_coding MGP_NODShiLtJ_T0074653.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154511342 154553232 + MGP_NODShiLtJ_P0074653 Dtx2 protein_coding protein_coding MGP_NODShiLtJ_T0074654.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154511345 154531524 + MGP_NODShiLtJ_P0074654 Dtx2 protein_coding protein_coding MGP_NODShiLtJ_T0074655.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154511356 154553227 + MGP_NODShiLtJ_P0074655 Dtx2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074656.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154511375 154553225 + MGP_NODShiLtJ_P0074656 Dtx2 protein_coding protein_coding MGP_NODShiLtJ_T0074657.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154511380 154529395 + MGP_NODShiLtJ_P0074657 Dtx2 protein_coding protein_coding MGP_NODShiLtJ_T0074658.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154511604 154512905 + Dtx2 protein_coding processed_transcript MGP_NODShiLtJ_T0074659.1 MGP_NODShiLtJ_G0029998.1 mouse_genomes_project 5 154538877 154553225 + Dtx2 protein_coding retained_intron MGP_NODShiLtJ_T0075019.1 MGP_NODShiLtJ_G0030068.1 mouse_genomes_project 5 157216837 157224752 - MGP_NODShiLtJ_P0075019 Gal3st4 protein_coding protein_coding MGP_NODShiLtJ_T0075020.1 MGP_NODShiLtJ_G0030068.1 mouse_genomes_project 5 157216841 157224666 - MGP_NODShiLtJ_P0075020 Gal3st4 protein_coding protein_coding MGP_NODShiLtJ_T0075021.1 MGP_NODShiLtJ_G0030068.1 mouse_genomes_project 5 157216854 157224713 - Gal3st4 protein_coding processed_transcript MGP_NODShiLtJ_T0075022.1 MGP_NODShiLtJ_G0030068.1 mouse_genomes_project 5 157216854 157224713 - MGP_NODShiLtJ_P0075022 Gal3st4 protein_coding protein_coding MGP_NODShiLtJ_T0075024.1 MGP_NODShiLtJ_G0030068.1 mouse_genomes_project 5 157222904 157224661 - MGP_NODShiLtJ_P0075024 Gal3st4 protein_coding protein_coding MGP_NODShiLtJ_T0073629.1 MGP_NODShiLtJ_G0029831.1 mouse_genomes_project 5 138723562 138756111 - MGP_NODShiLtJ_P0073629 Gm42878 protein_coding protein_coding MGP_NODShiLtJ_T0073630.1 MGP_NODShiLtJ_G0029831.1 mouse_genomes_project 5 138723562 138756111 - MGP_NODShiLtJ_P0073630 Gm42878 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004743.1 MGP_NODShiLtJ_G0004088.1 mouse_genomes_project 5 134695117 134700634 - Gm26995 antisense antisense MGP_NODShiLtJ_T0100612.1 MGP_NODShiLtJ_G0039006.1 mouse_genomes_project 5 63976906 63977040 + Gm22536 snoRNA snoRNA MGP_NODShiLtJ_T0100646.1 MGP_NODShiLtJ_G0039040.1 mouse_genomes_project 5 166915786 166915915 + Gm23202 snoRNA snoRNA MGP_NODShiLtJ_T0101163.1 MGP_NODShiLtJ_G0039489.1 mouse_genomes_project 5 131184895 131185515 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0069974.1 MGP_NODShiLtJ_G0029121.1 mouse_genomes_project 5 22120222 22136029 + MGP_NODShiLtJ_P0069974 Armc10 protein_coding protein_coding MGP_NODShiLtJ_T0069975.1 MGP_NODShiLtJ_G0029121.1 mouse_genomes_project 5 22120288 22138241 + MGP_NODShiLtJ_P0069975 Armc10 protein_coding protein_coding MGP_NODShiLtJ_T0069976.1 MGP_NODShiLtJ_G0029121.1 mouse_genomes_project 5 22120426 22123077 + Armc10 protein_coding processed_transcript MGP_NODShiLtJ_T0069977.1 MGP_NODShiLtJ_G0029121.1 mouse_genomes_project 5 22120462 22138155 + MGP_NODShiLtJ_P0069977 Armc10 protein_coding protein_coding MGP_NODShiLtJ_T0069978.1 MGP_NODShiLtJ_G0029121.1 mouse_genomes_project 5 22122926 22126427 + Armc10 protein_coding retained_intron MGP_NODShiLtJ_T0074777.1 MGP_NODShiLtJ_G0030019.1 mouse_genomes_project 5 155749196 155760889 - MGP_NODShiLtJ_P0074777 Trim56 protein_coding protein_coding MGP_NODShiLtJ_T0074778.1 MGP_NODShiLtJ_G0030019.1 mouse_genomes_project 5 155758705 155760891 - MGP_NODShiLtJ_P0074778 Trim56 protein_coding protein_coding MGP_NODShiLtJ_T0071155.1 MGP_NODShiLtJ_G0029319.1 mouse_genomes_project 5 41730288 41879877 - MGP_NODShiLtJ_P0071155 Hs3st1 protein_coding protein_coding MGP_NODShiLtJ_T0071156.1 MGP_NODShiLtJ_G0029319.1 mouse_genomes_project 5 41730292 41765758 - MGP_NODShiLtJ_P0071156 Hs3st1 protein_coding protein_coding MGP_NODShiLtJ_T0071157.1 MGP_NODShiLtJ_G0029319.1 mouse_genomes_project 5 41731122 41766370 - MGP_NODShiLtJ_P0071157 Hs3st1 protein_coding protein_coding MGP_NODShiLtJ_T0071158.1 MGP_NODShiLtJ_G0029319.1 mouse_genomes_project 5 41731427 41765721 - MGP_NODShiLtJ_P0071158 Hs3st1 protein_coding protein_coding MGP_NODShiLtJ_T0014983.1 MGP_NODShiLtJ_G0013091.1 mouse_genomes_project 5 121167083 121167693 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072652.1 MGP_NODShiLtJ_G0029631.1 mouse_genomes_project 5 121819301 121819405 + MGP_NODShiLtJ_P0072652 Gm17304 protein_coding protein_coding MGP_NODShiLtJ_T0004631.1 MGP_NODShiLtJ_G0004006.1 mouse_genomes_project 5 48224023 48240797 + Gm42413 antisense antisense MGP_NODShiLtJ_T0001459.1 MGP_NODShiLtJ_G0001376.1 mouse_genomes_project 5 32892030 32892661 + TEC TEC MGP_NODShiLtJ_T0004689.1 MGP_NODShiLtJ_G0004050.1 mouse_genomes_project 5 114072013 114074049 + 4930522N08Rik antisense antisense MGP_NODShiLtJ_T0074242.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147490848 147561633 + MGP_NODShiLtJ_P0074242 Sfswap protein_coding protein_coding MGP_NODShiLtJ_T0074243.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147490867 147559887 + MGP_NODShiLtJ_P0074243 Sfswap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074244.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147490873 147494270 + Sfswap protein_coding retained_intron MGP_NODShiLtJ_T0074245.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147490878 147561630 + Sfswap protein_coding processed_transcript MGP_NODShiLtJ_T0074246.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147491076 147494009 + MGP_NODShiLtJ_P0074246 Sfswap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074247.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147492021 147492676 + Sfswap protein_coding TEC MGP_NODShiLtJ_T0074248.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147492786 147493762 + Sfswap protein_coding processed_transcript MGP_NODShiLtJ_T0074249.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147493601 147494515 + Sfswap protein_coding retained_intron MGP_NODShiLtJ_T0074250.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147493723 147545070 + MGP_NODShiLtJ_P0074250 Sfswap protein_coding unknown_likely_coding MGP_NODShiLtJ_T0074251.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147493968 147502793 + Sfswap protein_coding retained_intron MGP_NODShiLtJ_T0074252.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147531789 147541179 + MGP_NODShiLtJ_P0074252 Sfswap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074253.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147539257 147561630 + Sfswap protein_coding retained_intron MGP_NODShiLtJ_T0074254.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147541094 147549787 + Sfswap protein_coding processed_transcript MGP_NODShiLtJ_T0074255.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147550446 147561633 + Sfswap protein_coding retained_intron MGP_NODShiLtJ_T0074256.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147550787 147560261 + Sfswap protein_coding retained_intron MGP_NODShiLtJ_T0074257.1 MGP_NODShiLtJ_G0029926.1 mouse_genomes_project 5 147560966 147561633 + Sfswap protein_coding retained_intron MGP_NODShiLtJ_T0001682.1 MGP_NODShiLtJ_G0001596.1 mouse_genomes_project 5 110939587 110940133 - TEC TEC MGP_NODShiLtJ_T0001716.1 MGP_NODShiLtJ_G0001630.1 mouse_genomes_project 5 127049690 127050424 + TEC TEC MGP_NODShiLtJ_T0004783.1 MGP_NODShiLtJ_G0004115.1 mouse_genomes_project 5 145031054 145049159 - Tmem132cos antisense antisense MGP_NODShiLtJ_T0004784.1 MGP_NODShiLtJ_G0004115.1 mouse_genomes_project 5 145031070 145049119 - Tmem132cos antisense antisense MGP_NODShiLtJ_T0004785.1 MGP_NODShiLtJ_G0004115.1 mouse_genomes_project 5 145031132 145049122 - Tmem132cos antisense antisense MGP_NODShiLtJ_T0001560.1 MGP_NODShiLtJ_G0001476.1 mouse_genomes_project 5 56014444 56016637 - TEC TEC MGP_NODShiLtJ_T0008311.1 MGP_NODShiLtJ_G0006738.1 mouse_genomes_project 5 144571460 144588721 - Gm42953 lincRNA lincRNA MGP_NODShiLtJ_T0008235.1 MGP_NODShiLtJ_G0006688.1 mouse_genomes_project 5 128817559 128820358 + Gm42864 lincRNA lincRNA MGP_NODShiLtJ_T0001719.1 MGP_NODShiLtJ_G0001633.1 mouse_genomes_project 5 127353580 127354374 - TEC TEC MGP_NODShiLtJ_T0073742.1 MGP_NODShiLtJ_G0029845.1 mouse_genomes_project 5 139585168 139614998 - MGP_NODShiLtJ_P0073742 Tctn1 protein_coding protein_coding MGP_NODShiLtJ_T0073743.1 MGP_NODShiLtJ_G0029845.1 mouse_genomes_project 5 139591524 139614998 - MGP_NODShiLtJ_P0073743 Tctn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073744.1 MGP_NODShiLtJ_G0029845.1 mouse_genomes_project 5 139595808 139602227 - Tctn1 protein_coding processed_transcript MGP_NODShiLtJ_T0073745.1 MGP_NODShiLtJ_G0029845.1 mouse_genomes_project 5 139598676 139605108 - Tctn1 protein_coding retained_intron MGP_NODShiLtJ_T0073746.1 MGP_NODShiLtJ_G0029845.1 mouse_genomes_project 5 139602873 139614953 - Tctn1 protein_coding retained_intron MGP_NODShiLtJ_T0001696.1 MGP_NODShiLtJ_G0001610.1 mouse_genomes_project 5 116675749 116676786 - TEC TEC MGP_NODShiLtJ_T0101955.1 MGP_NODShiLtJ_G0040123.1 mouse_genomes_project 5 99756523 99776113 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015018.1 MGP_NODShiLtJ_G0013126.1 mouse_genomes_project 5 131257020 131257365 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001618.1 MGP_NODShiLtJ_G0001533.1 mouse_genomes_project 5 74112250 74116266 - TEC TEC MGP_NODShiLtJ_T0073999.1 MGP_NODShiLtJ_G0029883.1 mouse_genomes_project 5 141462454 141476284 + MGP_NODShiLtJ_P0073999 Gm43518 protein_coding protein_coding MGP_NODShiLtJ_T0015050.1 MGP_NODShiLtJ_G0013158.1 mouse_genomes_project 5 155989650 155989897 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072225.1 MGP_NODShiLtJ_G0029536.1 mouse_genomes_project 5 104089466 104112813 + MGP_NODShiLtJ_P0072225 Ereg protein_coding protein_coding MGP_NODShiLtJ_T0071547.1 MGP_NODShiLtJ_G0029388.1 mouse_genomes_project 5 73400749 73437235 + MGP_NODShiLtJ_P0071547 Chrna9 protein_coding protein_coding MGP_NODShiLtJ_T0071548.1 MGP_NODShiLtJ_G0029388.1 mouse_genomes_project 5 73400756 73439313 + MGP_NODShiLtJ_P0071548 Chrna9 protein_coding protein_coding MGP_NODShiLtJ_T0071549.1 MGP_NODShiLtJ_G0029388.1 mouse_genomes_project 5 73400776 73401744 + Chrna9 protein_coding retained_intron MGP_NODShiLtJ_T0071550.1 MGP_NODShiLtJ_G0029388.1 mouse_genomes_project 5 73400801 73411054 + Chrna9 protein_coding processed_transcript MGP_NODShiLtJ_T0071551.1 MGP_NODShiLtJ_G0029388.1 mouse_genomes_project 5 73400803 73411070 + Chrna9 protein_coding processed_transcript MGP_NODShiLtJ_T0071552.1 MGP_NODShiLtJ_G0029388.1 mouse_genomes_project 5 73435201 73446393 + MGP_NODShiLtJ_P0071552 Chrna9 protein_coding protein_coding MGP_NODShiLtJ_T0071553.1 MGP_NODShiLtJ_G0029388.1 mouse_genomes_project 5 73444961 73446207 + Chrna9 protein_coding processed_transcript MGP_NODShiLtJ_T0008082.1 MGP_NODShiLtJ_G0006581.1 mouse_genomes_project 5 71891649 71908499 - Gm3716 lincRNA lincRNA MGP_NODShiLtJ_T0008083.1 MGP_NODShiLtJ_G0006581.1 mouse_genomes_project 5 71893020 71900943 - Gm3716 lincRNA lincRNA MGP_NODShiLtJ_T0014827.1 MGP_NODShiLtJ_G0012935.1 mouse_genomes_project 5 35433224 35433536 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001834.1 MGP_NODShiLtJ_G0001747.1 mouse_genomes_project 5 152481924 152483288 + TEC TEC MGP_NODShiLtJ_T0001835.1 MGP_NODShiLtJ_G0001747.1 mouse_genomes_project 5 152481936 152482535 + TEC TEC MGP_NODShiLtJ_T0001839.1 MGP_NODShiLtJ_G0001751.1 mouse_genomes_project 5 153303567 153305189 - TEC TEC MGP_NODShiLtJ_T0001793.1 MGP_NODShiLtJ_G0001706.1 mouse_genomes_project 5 146077087 146080315 - TEC TEC MGP_NODShiLtJ_T0071658.1 MGP_NODShiLtJ_G0029401.1 mouse_genomes_project 5 75563004 75582126 - MGP_NODShiLtJ_P0071658 Gm21905 protein_coding protein_coding MGP_NODShiLtJ_T0074082.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142029453 142055075 + MGP_NODShiLtJ_P0074082 Kmt5a protein_coding protein_coding MGP_NODShiLtJ_T0074083.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142029490 142054278 + MGP_NODShiLtJ_P0074083 Kmt5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074084.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142029508 142030779 + Kmt5a protein_coding retained_intron MGP_NODShiLtJ_T0074085.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142035002 142053727 + MGP_NODShiLtJ_P0074085 Kmt5a protein_coding protein_coding MGP_NODShiLtJ_T0074086.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142035014 142054310 + Kmt5a protein_coding processed_transcript MGP_NODShiLtJ_T0074087.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142035181 142052323 + MGP_NODShiLtJ_P0074087 Kmt5a protein_coding protein_coding MGP_NODShiLtJ_T0074088.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142035257 142040789 + Kmt5a protein_coding retained_intron MGP_NODShiLtJ_T0074089.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142036177 142047500 + Kmt5a protein_coding processed_transcript MGP_NODShiLtJ_T0074090.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142036435 142052256 + Kmt5a protein_coding processed_transcript MGP_NODShiLtJ_T0074091.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142036478 142040270 + Kmt5a protein_coding processed_transcript MGP_NODShiLtJ_T0074092.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142039656 142051417 + Kmt5a protein_coding processed_transcript MGP_NODShiLtJ_T0074093.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142039869 142051568 + Kmt5a protein_coding retained_intron MGP_NODShiLtJ_T0074094.1 MGP_NODShiLtJ_G0029895.1 mouse_genomes_project 5 142040656 142053604 + Kmt5a protein_coding retained_intron MGP_NODShiLtJ_T0074885.1 MGP_NODShiLtJ_G0030038.1 mouse_genomes_project 5 156356773 156368738 + MGP_NODShiLtJ_P0074885 protein_coding protein_coding MGP_NODShiLtJ_T0074886.1 MGP_NODShiLtJ_G0030038.1 mouse_genomes_project 5 156356795 156364443 + protein_coding retained_intron MGP_NODShiLtJ_T0074887.1 MGP_NODShiLtJ_G0030038.1 mouse_genomes_project 5 156356804 156365258 + MGP_NODShiLtJ_P0074887 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074889.1 MGP_NODShiLtJ_G0030038.1 mouse_genomes_project 5 156356830 156368743 + MGP_NODShiLtJ_P0074889 protein_coding protein_coding MGP_NODShiLtJ_T0074890.1 MGP_NODShiLtJ_G0030038.1 mouse_genomes_project 5 156356830 156361540 + MGP_NODShiLtJ_P0074890 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074891.1 MGP_NODShiLtJ_G0030038.1 mouse_genomes_project 5 156357782 156367824 + MGP_NODShiLtJ_P0074891 protein_coding protein_coding MGP_NODShiLtJ_T0074892.1 MGP_NODShiLtJ_G0030038.1 mouse_genomes_project 5 156365963 156367007 + MGP_NODShiLtJ_P0074892 protein_coding protein_coding MGP_NODShiLtJ_T0074893.1 MGP_NODShiLtJ_G0030038.1 mouse_genomes_project 5 156367009 156367883 + MGP_NODShiLtJ_P0074893 protein_coding protein_coding MGP_NODShiLtJ_T0072687.1 MGP_NODShiLtJ_G0029635.1 mouse_genomes_project 5 122351629 122550970 - MGP_NODShiLtJ_P0072687 Tgfbr3 protein_coding protein_coding MGP_NODShiLtJ_T0072688.1 MGP_NODShiLtJ_G0029635.1 mouse_genomes_project 5 122355023 122443923 - Tgfbr3 protein_coding processed_transcript MGP_NODShiLtJ_T0072689.1 MGP_NODShiLtJ_G0029635.1 mouse_genomes_project 5 122364183 122380006 - MGP_NODShiLtJ_P0072689 Tgfbr3 protein_coding protein_coding MGP_NODShiLtJ_T0072690.1 MGP_NODShiLtJ_G0029635.1 mouse_genomes_project 5 122395484 122550936 - Tgfbr3 protein_coding retained_intron MGP_NODShiLtJ_T0008062.1 MGP_NODShiLtJ_G0006564.1 mouse_genomes_project 5 56041278 56059185 - C130083M11Rik lincRNA lincRNA MGP_NODShiLtJ_T0099407.1 MGP_NODShiLtJ_G0037801.1 mouse_genomes_project 5 163522792 163522896 + Gm24311 snRNA snRNA MGP_NODShiLtJ_T0072103.1 MGP_NODShiLtJ_G0029495.1 mouse_genomes_project 5 100410522 100464428 + MGP_NODShiLtJ_P0072103 Prr27 protein_coding protein_coding MGP_NODShiLtJ_T0072104.1 MGP_NODShiLtJ_G0029495.1 mouse_genomes_project 5 100410522 100464428 + MGP_NODShiLtJ_P0072104 Prr27 protein_coding protein_coding MGP_NODShiLtJ_T0074576.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153804841 153812993 + MGP_NODShiLtJ_P0074576 Nsun5 protein_coding protein_coding MGP_NODShiLtJ_T0074577.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153804858 153806292 + Nsun5 protein_coding processed_transcript MGP_NODShiLtJ_T0074578.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153804863 153810399 + MGP_NODShiLtJ_P0074578 Nsun5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074579.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153804879 153810260 + MGP_NODShiLtJ_P0074579 Nsun5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074580.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153805465 153807430 + Nsun5 protein_coding retained_intron MGP_NODShiLtJ_T0074581.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153805815 153810279 + Nsun5 protein_coding retained_intron MGP_NODShiLtJ_T0074582.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153805947 153806697 + Nsun5 protein_coding retained_intron MGP_NODShiLtJ_T0074583.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153809836 153813000 + Nsun5 protein_coding retained_intron MGP_NODShiLtJ_T0074584.1 MGP_NODShiLtJ_G0029983.1 mouse_genomes_project 5 153810373 153812338 + Nsun5 protein_coding retained_intron MGP_NODShiLtJ_T0001853.1 MGP_NODShiLtJ_G0001765.1 mouse_genomes_project 5 160655737 160656418 - TEC TEC MGP_NODShiLtJ_T0074814.1 MGP_NODShiLtJ_G0030026.1 mouse_genomes_project 5 155994802 156019101 - MGP_NODShiLtJ_P0074814 Slc12a9 protein_coding protein_coding MGP_NODShiLtJ_T0074815.1 MGP_NODShiLtJ_G0030026.1 mouse_genomes_project 5 156002783 156005526 - Slc12a9 protein_coding retained_intron MGP_NODShiLtJ_T0074816.1 MGP_NODShiLtJ_G0030026.1 mouse_genomes_project 5 156013613 156019101 - Slc12a9 protein_coding retained_intron MGP_NODShiLtJ_T0074817.1 MGP_NODShiLtJ_G0030026.1 mouse_genomes_project 5 156017778 156018514 - MGP_NODShiLtJ_P0074817 Slc12a9 protein_coding protein_coding MGP_NODShiLtJ_T0074745.1 MGP_NODShiLtJ_G0030012.1 mouse_genomes_project 5 155570014 155583445 + MGP_NODShiLtJ_P0074745 Fis1 protein_coding protein_coding MGP_NODShiLtJ_T0074746.1 MGP_NODShiLtJ_G0030012.1 mouse_genomes_project 5 155570145 155583362 + MGP_NODShiLtJ_P0074746 Fis1 protein_coding protein_coding MGP_NODShiLtJ_T0074747.1 MGP_NODShiLtJ_G0030012.1 mouse_genomes_project 5 155579302 155583447 + MGP_NODShiLtJ_P0074747 Fis1 protein_coding protein_coding MGP_NODShiLtJ_T0074748.1 MGP_NODShiLtJ_G0030012.1 mouse_genomes_project 5 155579658 155583170 + Fis1 protein_coding processed_transcript MGP_NODShiLtJ_T0074749.1 MGP_NODShiLtJ_G0030012.1 mouse_genomes_project 5 155579669 155583323 + Fis1 protein_coding processed_transcript MGP_NODShiLtJ_T0074750.1 MGP_NODShiLtJ_G0030012.1 mouse_genomes_project 5 155580070 155583224 + Fis1 protein_coding processed_transcript MGP_NODShiLtJ_T0001631.1 MGP_NODShiLtJ_G0001546.1 mouse_genomes_project 5 75617411 75621098 + TEC TEC MGP_NODShiLtJ_T0011497.1 MGP_NODShiLtJ_G0009630.1 mouse_genomes_project 5 128328837 128329198 - Gm27998 misc_RNA misc_RNA MGP_NODShiLtJ_T0071078.1 MGP_NODShiLtJ_G0029306.1 mouse_genomes_project 5 39673202 39680270 + MGP_NODShiLtJ_P0071078 Cytl1 protein_coding protein_coding MGP_NODShiLtJ_T0071079.1 MGP_NODShiLtJ_G0029306.1 mouse_genomes_project 5 39676242 39680265 + Cytl1 protein_coding retained_intron MGP_NODShiLtJ_T0071370.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57425475 57620294 + MGP_NODShiLtJ_P0071370 Rbpj protein_coding protein_coding MGP_NODShiLtJ_T0071371.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57518241 57519772 + Rbpj protein_coding retained_intron MGP_NODShiLtJ_T0071372.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57518369 57630473 + MGP_NODShiLtJ_P0071372 Rbpj protein_coding protein_coding MGP_NODShiLtJ_T0071373.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57556349 57630477 + MGP_NODShiLtJ_P0071373 Rbpj protein_coding protein_coding MGP_NODShiLtJ_T0071374.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57556503 57630477 + MGP_NODShiLtJ_P0071374 Rbpj protein_coding protein_coding MGP_NODShiLtJ_T0071375.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57556866 57625462 + MGP_NODShiLtJ_P0071375 Rbpj protein_coding protein_coding MGP_NODShiLtJ_T0071376.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57587906 57615577 + Rbpj protein_coding processed_transcript MGP_NODShiLtJ_T0071377.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57593384 57611639 + Rbpj protein_coding processed_transcript MGP_NODShiLtJ_T0071378.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57593547 57611639 + Rbpj protein_coding processed_transcript MGP_NODShiLtJ_T0071379.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57608235 57611641 + Rbpj protein_coding retained_intron MGP_NODShiLtJ_T0071380.1 MGP_NODShiLtJ_G0029357.1 mouse_genomes_project 5 57615335 57622586 + Rbpj protein_coding retained_intron MGP_NODShiLtJ_T0001814.1 MGP_NODShiLtJ_G0001727.1 mouse_genomes_project 5 149861562 149862695 - TEC TEC MGP_NODShiLtJ_T0015070.1 MGP_NODShiLtJ_G0013178.1 mouse_genomes_project 5 162643885 162644267 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073129.1 MGP_NODShiLtJ_G0029729.1 mouse_genomes_project 5 130299474 130323611 + MGP_NODShiLtJ_P0073129 Dao protein_coding protein_coding MGP_NODShiLtJ_T0073130.1 MGP_NODShiLtJ_G0029729.1 mouse_genomes_project 5 130305588 130313654 + MGP_NODShiLtJ_P0073130 Dao protein_coding protein_coding MGP_NODShiLtJ_T0073131.1 MGP_NODShiLtJ_G0029729.1 mouse_genomes_project 5 130315247 130318160 + Dao protein_coding retained_intron MGP_NODShiLtJ_T0099371.1 MGP_NODShiLtJ_G0037765.1 mouse_genomes_project 5 99220962 99221068 - Gm24121 snRNA snRNA MGP_NODShiLtJ_T0099375.1 MGP_NODShiLtJ_G0037769.1 mouse_genomes_project 5 109781442 109781549 + Gm25937 snRNA snRNA MGP_NODShiLtJ_T0015076.1 MGP_NODShiLtJ_G0013184.1 mouse_genomes_project 5 163979642 163979855 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004753.1 MGP_NODShiLtJ_G0004092.1 mouse_genomes_project 5 137388618 137403334 - Gm27199 antisense antisense MGP_NODShiLtJ_T0074347.1 MGP_NODShiLtJ_G0029946.1 mouse_genomes_project 5 148285481 148296281 - MGP_NODShiLtJ_P0074347 Sbds protein_coding protein_coding MGP_NODShiLtJ_T0074348.1 MGP_NODShiLtJ_G0029946.1 mouse_genomes_project 5 148286155 148296156 - MGP_NODShiLtJ_P0074348 Sbds protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074349.1 MGP_NODShiLtJ_G0029946.1 mouse_genomes_project 5 148287634 148294796 - MGP_NODShiLtJ_P0074349 Sbds protein_coding protein_coding MGP_NODShiLtJ_T0074350.1 MGP_NODShiLtJ_G0029946.1 mouse_genomes_project 5 148288181 148296243 - Sbds protein_coding processed_transcript MGP_NODShiLtJ_T0074351.1 MGP_NODShiLtJ_G0029946.1 mouse_genomes_project 5 148291568 148296229 - Sbds protein_coding processed_transcript MGP_NODShiLtJ_T0101952.1 MGP_NODShiLtJ_G0040120.1 mouse_genomes_project 5 99444283 99445912 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010598.1 MGP_NODShiLtJ_G0008731.1 mouse_genomes_project 5 126658844 126658911 - Mir7026 miRNA miRNA MGP_NODShiLtJ_T0070086.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25121314 25129755 + MGP_NODShiLtJ_P0070086 Abcb8 protein_coding protein_coding MGP_NODShiLtJ_T0070087.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25121327 25139586 + MGP_NODShiLtJ_P0070087 Abcb8 protein_coding protein_coding MGP_NODShiLtJ_T0070088.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25121806 25139477 + MGP_NODShiLtJ_P0070088 Abcb8 protein_coding protein_coding MGP_NODShiLtJ_T0070089.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25122047 25133509 + Abcb8 protein_coding processed_transcript MGP_NODShiLtJ_T0070090.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25122059 25130198 + Abcb8 protein_coding retained_intron MGP_NODShiLtJ_T0070091.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25130130 25139479 + MGP_NODShiLtJ_P0070091 Abcb8 protein_coding protein_coding MGP_NODShiLtJ_T0070092.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25131786 25136243 + Abcb8 protein_coding retained_intron MGP_NODShiLtJ_T0070093.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25135346 25139478 + Abcb8 protein_coding retained_intron MGP_NODShiLtJ_T0070094.1 MGP_NODShiLtJ_G0029142.1 mouse_genomes_project 5 25135939 25139456 + MGP_NODShiLtJ_P0070094 Abcb8 protein_coding protein_coding MGP_NODShiLtJ_T0015039.1 MGP_NODShiLtJ_G0013147.1 mouse_genomes_project 5 148217810 148218212 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014997.1 MGP_NODShiLtJ_G0013105.1 mouse_genomes_project 5 124284624 124286027 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072188.1 MGP_NODShiLtJ_G0029523.1 mouse_genomes_project 5 103492314 103511442 + MGP_NODShiLtJ_P0072188 Afp protein_coding protein_coding MGP_NODShiLtJ_T0072189.1 MGP_NODShiLtJ_G0029523.1 mouse_genomes_project 5 103492316 103498598 + MGP_NODShiLtJ_P0072189 Afp protein_coding protein_coding MGP_NODShiLtJ_T0072190.1 MGP_NODShiLtJ_G0029523.1 mouse_genomes_project 5 103492795 103498648 + Afp protein_coding retained_intron MGP_NODShiLtJ_T0072191.1 MGP_NODShiLtJ_G0029523.1 mouse_genomes_project 5 103504068 103506707 + Afp protein_coding retained_intron MGP_NODShiLtJ_T0072192.1 MGP_NODShiLtJ_G0029523.1 mouse_genomes_project 5 103509966 103511388 + Afp protein_coding retained_intron MGP_NODShiLtJ_T0074514.1 MGP_NODShiLtJ_G0029971.1 mouse_genomes_project 5 153392294 153392941 + MGP_NODShiLtJ_P0074514 Abhd11 protein_coding protein_coding MGP_NODShiLtJ_T0074515.1 MGP_NODShiLtJ_G0029971.1 mouse_genomes_project 5 153392337 153395052 + MGP_NODShiLtJ_P0074515 Abhd11 protein_coding protein_coding MGP_NODShiLtJ_T0074516.1 MGP_NODShiLtJ_G0029971.1 mouse_genomes_project 5 153392572 153395052 + MGP_NODShiLtJ_P0074516 Abhd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074517.1 MGP_NODShiLtJ_G0029971.1 mouse_genomes_project 5 153392587 153395052 + MGP_NODShiLtJ_P0074517 Abhd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074518.1 MGP_NODShiLtJ_G0029971.1 mouse_genomes_project 5 153392593 153394901 + MGP_NODShiLtJ_P0074518 Abhd11 protein_coding protein_coding MGP_NODShiLtJ_T0074519.1 MGP_NODShiLtJ_G0029971.1 mouse_genomes_project 5 153392854 153394858 + MGP_NODShiLtJ_P0074519 Abhd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001738.1 MGP_NODShiLtJ_G0001652.1 mouse_genomes_project 5 132434569 132436547 + TEC TEC MGP_NODShiLtJ_T0007998.1 MGP_NODShiLtJ_G0006521.1 mouse_genomes_project 5 26524449 26525903 + Gm43972 lincRNA lincRNA MGP_NODShiLtJ_T0069981.1 MGP_NODShiLtJ_G0029123.1 mouse_genomes_project 5 22221396 22246950 + Pmpcb protein_coding retained_intron MGP_NODShiLtJ_T0069982.1 MGP_NODShiLtJ_G0029123.1 mouse_genomes_project 5 22221433 22246955 + MGP_NODShiLtJ_P0069982 Pmpcb protein_coding protein_coding MGP_NODShiLtJ_T0069983.1 MGP_NODShiLtJ_G0029123.1 mouse_genomes_project 5 22223142 22227081 + Pmpcb protein_coding retained_intron MGP_NODShiLtJ_T0069984.1 MGP_NODShiLtJ_G0029123.1 mouse_genomes_project 5 22228751 22229551 + Pmpcb protein_coding retained_intron MGP_NODShiLtJ_T0069985.1 MGP_NODShiLtJ_G0029123.1 mouse_genomes_project 5 22246316 22246944 + Pmpcb protein_coding retained_intron MGP_NODShiLtJ_T0069986.1 MGP_NODShiLtJ_G0029123.1 mouse_genomes_project 5 22246442 22246950 + MGP_NODShiLtJ_P0069986 Pmpcb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069987.1 MGP_NODShiLtJ_G0029123.1 mouse_genomes_project 5 22246578 22246944 + Pmpcb protein_coding retained_intron MGP_NODShiLtJ_T0098049.1 MGP_NODShiLtJ_G0036461.1 mouse_genomes_project 5 103913736 103913853 + Gm22816 rRNA rRNA MGP_NODShiLtJ_T0100643.1 MGP_NODShiLtJ_G0039037.1 mouse_genomes_project 5 147802635 147802766 + Snora15 snoRNA snoRNA MGP_NODShiLtJ_T0008352.1 MGP_NODShiLtJ_G0006766.1 mouse_genomes_project 5 159824001 159824908 - Gm42808 lincRNA lincRNA MGP_NODShiLtJ_T0001661.1 MGP_NODShiLtJ_G0001575.1 mouse_genomes_project 5 84728886 84731209 + TEC TEC MGP_NODShiLtJ_T0001791.1 MGP_NODShiLtJ_G0001704.1 mouse_genomes_project 5 145084309 145085368 + TEC TEC MGP_NODShiLtJ_T0070434.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32270249 32295865 + MGP_NODShiLtJ_P0070434 Cad protein_coding protein_coding MGP_NODShiLtJ_T0070435.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32270280 32285148 + MGP_NODShiLtJ_P0070435 Cad protein_coding protein_coding MGP_NODShiLtJ_T0070436.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32270397 32295618 + MGP_NODShiLtJ_P0070436 Cad protein_coding protein_coding MGP_NODShiLtJ_T0070437.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32270397 32295618 + MGP_NODShiLtJ_P0070437 Cad protein_coding protein_coding MGP_NODShiLtJ_T0070438.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32270424 32295581 + MGP_NODShiLtJ_P0070438 Cad protein_coding protein_coding MGP_NODShiLtJ_T0070439.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32274122 32275413 + Cad protein_coding retained_intron MGP_NODShiLtJ_T0070440.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32277242 32284353 + Cad protein_coding retained_intron MGP_NODShiLtJ_T0070441.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32283679 32284565 + Cad protein_coding processed_transcript MGP_NODShiLtJ_T0070442.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32287740 32289579 + Cad protein_coding processed_transcript MGP_NODShiLtJ_T0070443.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32287853 32290090 + Cad protein_coding retained_intron MGP_NODShiLtJ_T0070444.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32287939 32290367 + Cad protein_coding retained_intron MGP_NODShiLtJ_T0070445.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32289693 32290966 + Cad protein_coding retained_intron MGP_NODShiLtJ_T0070446.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32291502 32293414 + MGP_NODShiLtJ_P0070446 Cad protein_coding protein_coding MGP_NODShiLtJ_T0070447.1 MGP_NODShiLtJ_G0029209.1 mouse_genomes_project 5 32293198 32294050 + Cad protein_coding retained_intron MGP_NODShiLtJ_T0073522.1 MGP_NODShiLtJ_G0029804.1 mouse_genomes_project 5 137460496 137485687 - MGP_NODShiLtJ_P0073522 Plbd2 protein_coding protein_coding MGP_NODShiLtJ_T0073523.1 MGP_NODShiLtJ_G0029804.1 mouse_genomes_project 5 137462461 137485663 - Plbd2 protein_coding retained_intron MGP_NODShiLtJ_T0073524.1 MGP_NODShiLtJ_G0029804.1 mouse_genomes_project 5 137464513 137485674 - Plbd2 protein_coding retained_intron MGP_NODShiLtJ_T0071236.1 MGP_NODShiLtJ_G0029334.1 mouse_genomes_project 5 48223679 48240946 - MGP_NODShiLtJ_P0071236 Qdpr protein_coding protein_coding MGP_NODShiLtJ_T0071237.1 MGP_NODShiLtJ_G0029334.1 mouse_genomes_project 5 48223779 48233443 - Qdpr protein_coding retained_intron MGP_NODShiLtJ_T0071238.1 MGP_NODShiLtJ_G0029334.1 mouse_genomes_project 5 48224134 48235218 - Qdpr protein_coding processed_transcript MGP_NODShiLtJ_T0071239.1 MGP_NODShiLtJ_G0029334.1 mouse_genomes_project 5 48228976 48240813 - MGP_NODShiLtJ_P0071239 Qdpr protein_coding protein_coding MGP_NODShiLtJ_T0071240.1 MGP_NODShiLtJ_G0029334.1 mouse_genomes_project 5 48233351 48240797 - MGP_NODShiLtJ_P0071240 Qdpr protein_coding protein_coding MGP_NODShiLtJ_T0001431.1 MGP_NODShiLtJ_G0001350.1 mouse_genomes_project 5 16106249 16107092 + TEC TEC MGP_NODShiLtJ_T0073518.1 MGP_NODShiLtJ_G0029803.1 mouse_genomes_project 5 137453769 137461147 + MGP_NODShiLtJ_P0073518 Sds protein_coding protein_coding MGP_NODShiLtJ_T0073519.1 MGP_NODShiLtJ_G0029803.1 mouse_genomes_project 5 137453774 137461147 + MGP_NODShiLtJ_P0073519 Sds protein_coding protein_coding MGP_NODShiLtJ_T0073520.1 MGP_NODShiLtJ_G0029803.1 mouse_genomes_project 5 137456101 137457903 + MGP_NODShiLtJ_P0073520 Sds protein_coding protein_coding MGP_NODShiLtJ_T0073521.1 MGP_NODShiLtJ_G0029803.1 mouse_genomes_project 5 137457578 137458104 + Sds protein_coding retained_intron MGP_NODShiLtJ_T0069729.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2780439 2881387 - MGP_NODShiLtJ_P0069729 Cfap69 protein_coding protein_coding MGP_NODShiLtJ_T0069730.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2780439 2881178 - MGP_NODShiLtJ_P0069730 Cfap69 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069731.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2780443 2881356 - MGP_NODShiLtJ_P0069731 Cfap69 protein_coding protein_coding MGP_NODShiLtJ_T0069732.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2782136 2833598 - Cfap69 protein_coding processed_transcript MGP_NODShiLtJ_T0069733.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2782192 2783648 - MGP_NODShiLtJ_P0069733 Cfap69 protein_coding protein_coding MGP_NODShiLtJ_T0069734.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2782281 2788349 - MGP_NODShiLtJ_P0069734 Cfap69 protein_coding protein_coding MGP_NODShiLtJ_T0069735.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2782324 2827829 - MGP_NODShiLtJ_P0069735 Cfap69 protein_coding protein_coding MGP_NODShiLtJ_T0069736.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2787493 2881191 - MGP_NODShiLtJ_P0069736 Cfap69 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069737.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2790315 2881356 - MGP_NODShiLtJ_P0069737 Cfap69 protein_coding protein_coding MGP_NODShiLtJ_T0069738.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2794797 2881380 - MGP_NODShiLtJ_P0069738 Cfap69 protein_coding protein_coding MGP_NODShiLtJ_T0069739.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2837145 2837519 - Cfap69 protein_coding retained_intron MGP_NODShiLtJ_T0069740.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2864315 2881375 - Cfap69 protein_coding retained_intron MGP_NODShiLtJ_T0069741.1 MGP_NODShiLtJ_G0029077.1 mouse_genomes_project 5 2867067 2880435 - MGP_NODShiLtJ_P0069741 Cfap69 protein_coding protein_coding MGP_NODShiLtJ_T0074730.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155318955 155494606 - MGP_NODShiLtJ_P0074730 Col26a1 protein_coding protein_coding MGP_NODShiLtJ_T0074731.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155318955 155494669 - MGP_NODShiLtJ_P0074731 Col26a1 protein_coding protein_coding MGP_NODShiLtJ_T0074732.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155319951 155321734 - Col26a1 protein_coding retained_intron MGP_NODShiLtJ_T0074733.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155320270 155324886 - Col26a1 protein_coding retained_intron MGP_NODShiLtJ_T0074734.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155330764 155494395 - Col26a1 protein_coding retained_intron MGP_NODShiLtJ_T0074735.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155331483 155332630 - Col26a1 protein_coding retained_intron MGP_NODShiLtJ_T0074736.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155334873 155494694 - Col26a1 protein_coding retained_intron MGP_NODShiLtJ_T0074737.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155335047 155351859 - Col26a1 protein_coding processed_transcript MGP_NODShiLtJ_T0074738.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155342502 155494228 - Col26a1 protein_coding processed_transcript MGP_NODShiLtJ_T0074739.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155436860 155439253 - Col26a1 protein_coding retained_intron MGP_NODShiLtJ_T0074740.1 MGP_NODShiLtJ_G0030010.1 mouse_genomes_project 5 155437640 155494415 - Col26a1 protein_coding retained_intron MGP_NODShiLtJ_T0072207.1 MGP_NODShiLtJ_G0029529.1 mouse_genomes_project 5 103790741 103791690 + MGP_NODShiLtJ_P0072207 Pf4 protein_coding protein_coding MGP_NODShiLtJ_T0072208.1 MGP_NODShiLtJ_G0029529.1 mouse_genomes_project 5 103790819 103791463 + MGP_NODShiLtJ_P0072208 Pf4 protein_coding protein_coding MGP_NODShiLtJ_T0072209.1 MGP_NODShiLtJ_G0029529.1 mouse_genomes_project 5 103791197 103791685 + Pf4 protein_coding retained_intron MGP_NODShiLtJ_T0008173.1 MGP_NODShiLtJ_G0006653.1 mouse_genomes_project 5 119311607 119345487 + D930016D06Rik lincRNA lincRNA MGP_NODShiLtJ_T0008174.1 MGP_NODShiLtJ_G0006653.1 mouse_genomes_project 5 119311741 119328371 + D930016D06Rik lincRNA lincRNA MGP_NODShiLtJ_T0008175.1 MGP_NODShiLtJ_G0006653.1 mouse_genomes_project 5 119329992 119343352 + D930016D06Rik lincRNA lincRNA MGP_NODShiLtJ_T0008176.1 MGP_NODShiLtJ_G0006653.1 mouse_genomes_project 5 119330547 119342759 + D930016D06Rik lincRNA lincRNA MGP_NODShiLtJ_T0008177.1 MGP_NODShiLtJ_G0006653.1 mouse_genomes_project 5 119330589 119344777 + D930016D06Rik lincRNA lincRNA MGP_NODShiLtJ_T0004571.1 MGP_NODShiLtJ_G0003957.1 mouse_genomes_project 5 361689 362884 + 2510017J16Rik antisense antisense MGP_NODShiLtJ_T0008015.1 MGP_NODShiLtJ_G0006531.1 mouse_genomes_project 5 33768848 33776710 - Gm7596 lincRNA lincRNA MGP_NODShiLtJ_T0008016.1 MGP_NODShiLtJ_G0006531.1 mouse_genomes_project 5 33768874 33772108 - Gm7596 lincRNA lincRNA MGP_NODShiLtJ_T0018033.1 MGP_NODShiLtJ_G0015478.1 mouse_genomes_project 5 140885659 140888377 + Gm43813 processed_transcript sense_intronic MGP_NODShiLtJ_T0018034.1 MGP_NODShiLtJ_G0015478.1 mouse_genomes_project 5 140885659 140891013 + Gm43813 processed_transcript TEC MGP_NODShiLtJ_T0101157.1 MGP_NODShiLtJ_G0039486.1 mouse_genomes_project 5 86662013 86662400 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101158.1 MGP_NODShiLtJ_G0039486.1 mouse_genomes_project 5 86662029 86662584 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0070601.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32910872 32971163 + Mrpl33 protein_coding processed_transcript MGP_NODShiLtJ_T0070602.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32912674 32938122 + Mrpl33 protein_coding processed_transcript MGP_NODShiLtJ_T0070603.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32927711 32938122 + MGP_NODShiLtJ_P0070603 Mrpl33 protein_coding protein_coding MGP_NODShiLtJ_T0070604.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32927728 32958094 + Mrpl33 protein_coding processed_transcript MGP_NODShiLtJ_T0070605.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32927744 32971163 + Mrpl33 protein_coding processed_transcript MGP_NODShiLtJ_T0070606.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32927757 32980716 + MGP_NODShiLtJ_P0070606 Mrpl33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070607.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32927785 32938120 + Mrpl33 protein_coding retained_intron MGP_NODShiLtJ_T0070608.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32927789 32938115 + Mrpl33 protein_coding processed_transcript MGP_NODShiLtJ_T0070609.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32927924 32938050 + Mrpl33 protein_coding retained_intron MGP_NODShiLtJ_T0070612.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32970926 32974432 + Mrpl33 protein_coding processed_transcript MGP_NODShiLtJ_T0070613.1 MGP_NODShiLtJ_G0029232.1 mouse_genomes_project 5 32971797 32979763 + Mrpl33 protein_coding processed_transcript MGP_NODShiLtJ_T0072553.1 MGP_NODShiLtJ_G0029601.1 mouse_genomes_project 5 118117726 118242680 + Ptpn13 protein_coding retained_intron MGP_NODShiLtJ_T0072554.1 MGP_NODShiLtJ_G0029601.1 mouse_genomes_project 5 118117774 118229584 + MGP_NODShiLtJ_P0072554 Ptpn13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072555.1 MGP_NODShiLtJ_G0029601.1 mouse_genomes_project 5 118117790 118202033 + Ptpn13 protein_coding retained_intron MGP_NODShiLtJ_T0072556.1 MGP_NODShiLtJ_G0029601.1 mouse_genomes_project 5 118117909 118299639 + MGP_NODShiLtJ_P0072556 Ptpn13 protein_coding protein_coding MGP_NODShiLtJ_T0072557.1 MGP_NODShiLtJ_G0029601.1 mouse_genomes_project 5 118229409 118244585 + Ptpn13 protein_coding retained_intron MGP_NODShiLtJ_T0071176.1 MGP_NODShiLtJ_G0029325.1 mouse_genomes_project 5 46148790 46254385 + MGP_NODShiLtJ_P0071176 C1qtnf7 protein_coding protein_coding MGP_NODShiLtJ_T0071177.1 MGP_NODShiLtJ_G0029325.1 mouse_genomes_project 5 46149014 46241726 + MGP_NODShiLtJ_P0071177 C1qtnf7 protein_coding protein_coding MGP_NODShiLtJ_T0071178.1 MGP_NODShiLtJ_G0029325.1 mouse_genomes_project 5 46234375 46252182 + MGP_NODShiLtJ_P0071178 C1qtnf7 protein_coding protein_coding MGP_NODShiLtJ_T0008114.1 MGP_NODShiLtJ_G0006606.1 mouse_genomes_project 5 86234625 86236407 - Gm42757 lincRNA lincRNA MGP_NODShiLtJ_T0098052.1 MGP_NODShiLtJ_G0036464.1 mouse_genomes_project 5 133894229 133894350 + n-R5s174 rRNA rRNA MGP_NODShiLtJ_T0099405.1 MGP_NODShiLtJ_G0037799.1 mouse_genomes_project 5 158583415 158583522 + Gm26285 snRNA snRNA MGP_NODShiLtJ_T0004803.1 MGP_NODShiLtJ_G0004130.1 mouse_genomes_project 5 154637046 154638879 - Gm15701 antisense antisense MGP_NODShiLtJ_T0072728.1 MGP_NODShiLtJ_G0029645.1 mouse_genomes_project 5 123002891 123013131 - MGP_NODShiLtJ_P0072728 Gfi1 protein_coding protein_coding MGP_NODShiLtJ_T0072729.1 MGP_NODShiLtJ_G0029645.1 mouse_genomes_project 5 123003965 123011164 - MGP_NODShiLtJ_P0072729 Gfi1 protein_coding protein_coding MGP_NODShiLtJ_T0072730.1 MGP_NODShiLtJ_G0029645.1 mouse_genomes_project 5 123007835 123013362 - MGP_NODShiLtJ_P0072730 Gfi1 protein_coding protein_coding MGP_NODShiLtJ_T0001780.1 MGP_NODShiLtJ_G0001694.1 mouse_genomes_project 5 141188163 141188695 + TEC TEC MGP_NODShiLtJ_T0008092.1 MGP_NODShiLtJ_G0006589.1 mouse_genomes_project 5 82056240 82071757 - 1700025M24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008093.1 MGP_NODShiLtJ_G0006589.1 mouse_genomes_project 5 82056240 82071769 - 1700025M24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008094.1 MGP_NODShiLtJ_G0006589.1 mouse_genomes_project 5 82056258 82071763 - 1700025M24Rik lincRNA lincRNA MGP_NODShiLtJ_T0070588.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32834469 32836880 + Slc4a1ap protein_coding retained_intron MGP_NODShiLtJ_T0070589.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32834469 32865311 + MGP_NODShiLtJ_P0070589 Slc4a1ap protein_coding protein_coding MGP_NODShiLtJ_T0070590.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32834471 32841924 + Slc4a1ap protein_coding retained_intron MGP_NODShiLtJ_T0070591.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32834471 32865578 + MGP_NODShiLtJ_P0070591 Slc4a1ap protein_coding protein_coding MGP_NODShiLtJ_T0070592.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32834486 32844300 + MGP_NODShiLtJ_P0070592 Slc4a1ap protein_coding protein_coding MGP_NODShiLtJ_T0070593.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32834486 32865316 + MGP_NODShiLtJ_P0070593 Slc4a1ap protein_coding protein_coding MGP_NODShiLtJ_T0070594.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32835075 32839703 + Slc4a1ap protein_coding retained_intron MGP_NODShiLtJ_T0070595.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32839447 32842465 + Slc4a1ap protein_coding retained_intron MGP_NODShiLtJ_T0070596.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32843613 32865282 + MGP_NODShiLtJ_P0070596 Slc4a1ap protein_coding protein_coding MGP_NODShiLtJ_T0070597.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32852574 32865312 + Slc4a1ap protein_coding retained_intron MGP_NODShiLtJ_T0070598.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32852763 32865316 + MGP_NODShiLtJ_P0070598 Slc4a1ap protein_coding protein_coding MGP_NODShiLtJ_T0070599.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32852841 32865241 + MGP_NODShiLtJ_P0070599 Slc4a1ap protein_coding protein_coding MGP_NODShiLtJ_T0070600.1 MGP_NODShiLtJ_G0029231.1 mouse_genomes_project 5 32861925 32868050 + Slc4a1ap protein_coding processed_transcript MGP_NODShiLtJ_T0075120.1 MGP_NODShiLtJ_G0030084.1 mouse_genomes_project 5 158488043 158490057 + Cyp2w1 protein_coding retained_intron MGP_NODShiLtJ_T0075121.1 MGP_NODShiLtJ_G0030084.1 mouse_genomes_project 5 158488043 158492468 + MGP_NODShiLtJ_P0075121 Cyp2w1 protein_coding protein_coding MGP_NODShiLtJ_T0075122.1 MGP_NODShiLtJ_G0030084.1 mouse_genomes_project 5 158490010 158492102 + MGP_NODShiLtJ_P0075122 Cyp2w1 protein_coding protein_coding MGP_NODShiLtJ_T0070461.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32362571 32385000 - MGP_NODShiLtJ_P0070461 Mpv17 protein_coding protein_coding MGP_NODShiLtJ_T0070462.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32362580 32384971 - MGP_NODShiLtJ_P0070462 Mpv17 protein_coding protein_coding MGP_NODShiLtJ_T0070463.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32363013 32384947 - MGP_NODShiLtJ_P0070463 Mpv17 protein_coding protein_coding MGP_NODShiLtJ_T0070464.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32363375 32384977 - MGP_NODShiLtJ_P0070464 Mpv17 protein_coding protein_coding MGP_NODShiLtJ_T0070465.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32363433 32384901 - MGP_NODShiLtJ_P0070465 Mpv17 protein_coding protein_coding MGP_NODShiLtJ_T0070466.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32363458 32384941 - MGP_NODShiLtJ_P0070466 Mpv17 protein_coding protein_coding MGP_NODShiLtJ_T0070467.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32363526 32372697 - MGP_NODShiLtJ_P0070467 Mpv17 protein_coding protein_coding MGP_NODShiLtJ_T0070468.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32363628 32372717 - Mpv17 protein_coding retained_intron MGP_NODShiLtJ_T0070469.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32370730 32384967 - Mpv17 protein_coding retained_intron MGP_NODShiLtJ_T0070470.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32370930 32384970 - MGP_NODShiLtJ_P0070470 Mpv17 protein_coding protein_coding MGP_NODShiLtJ_T0070472.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32371696 32384967 - Mpv17 protein_coding retained_intron MGP_NODShiLtJ_T0070473.1 MGP_NODShiLtJ_G0029214.1 mouse_genomes_project 5 32371932 32384491 - Mpv17 protein_coding retained_intron MGP_NODShiLtJ_T0070996.1 MGP_NODShiLtJ_G0029291.1 mouse_genomes_project 5 38067797 38070344 + MGP_NODShiLtJ_P0070996 Psapl1 protein_coding protein_coding MGP_NODShiLtJ_T0008331.1 MGP_NODShiLtJ_G0006749.1 mouse_genomes_project 5 147348664 147349824 + Gm43001 lincRNA lincRNA MGP_NODShiLtJ_T0008332.1 MGP_NODShiLtJ_G0006749.1 mouse_genomes_project 5 147349222 147349735 + Gm43001 lincRNA lincRNA MGP_NODShiLtJ_T0073265.1 MGP_NODShiLtJ_G0029754.1 mouse_genomes_project 5 131343815 131374827 - MGP_NODShiLtJ_P0073265 Hnf1a protein_coding protein_coding MGP_NODShiLtJ_T0073266.1 MGP_NODShiLtJ_G0029754.1 mouse_genomes_project 5 131344896 131374604 - MGP_NODShiLtJ_P0073266 Hnf1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073267.1 MGP_NODShiLtJ_G0029754.1 mouse_genomes_project 5 131347416 131374604 - MGP_NODShiLtJ_P0073267 Hnf1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073268.1 MGP_NODShiLtJ_G0029754.1 mouse_genomes_project 5 131372424 131374854 - Hnf1a protein_coding retained_intron MGP_NODShiLtJ_T0072858.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126040297 126041655 - Gtpbp6 protein_coding retained_intron MGP_NODShiLtJ_T0072859.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126040298 126043522 - Gtpbp6 protein_coding retained_intron MGP_NODShiLtJ_T0072860.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126040340 126044491 - MGP_NODShiLtJ_P0072860 Gtpbp6 protein_coding protein_coding MGP_NODShiLtJ_T0072861.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126041227 126043496 - Gtpbp6 protein_coding processed_transcript MGP_NODShiLtJ_T0072862.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126041551 126043736 - MGP_NODShiLtJ_P0072862 Gtpbp6 protein_coding protein_coding MGP_NODShiLtJ_T0072863.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126042110 126043244 - Gtpbp6 protein_coding retained_intron MGP_NODShiLtJ_T0072864.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126042968 126044460 - Gtpbp6 protein_coding processed_transcript MGP_NODShiLtJ_T0072865.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126043020 126043927 - Gtpbp6 protein_coding retained_intron MGP_NODShiLtJ_T0072866.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126043167 126043752 - Gtpbp6 protein_coding retained_intron MGP_NODShiLtJ_T0072867.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126043355 126044031 - Gtpbp6 protein_coding retained_intron MGP_NODShiLtJ_T0072868.1 MGP_NODShiLtJ_G0029679.1 mouse_genomes_project 5 126043368 126044481 - Gtpbp6 protein_coding retained_intron MGP_NODShiLtJ_T0075132.1 MGP_NODShiLtJ_G0030087.1 mouse_genomes_project 5 158544206 158554556 + MGP_NODShiLtJ_P0075132 C130050O18Rik protein_coding protein_coding MGP_NODShiLtJ_T0075133.1 MGP_NODShiLtJ_G0030087.1 mouse_genomes_project 5 158545317 158554553 + MGP_NODShiLtJ_P0075133 C130050O18Rik protein_coding protein_coding MGP_NODShiLtJ_T0075134.1 MGP_NODShiLtJ_G0030087.1 mouse_genomes_project 5 158545395 158554558 + MGP_NODShiLtJ_P0075134 C130050O18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014941.1 MGP_NODShiLtJ_G0013049.1 mouse_genomes_project 5 100790576 100792434 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072112.1 MGP_NODShiLtJ_G0029499.1 mouse_genomes_project 5 100651195 100707628 + MGP_NODShiLtJ_P0072112 Gm28434 protein_coding protein_coding MGP_NODShiLtJ_T0001820.1 MGP_NODShiLtJ_G0001733.1 mouse_genomes_project 5 150166331 150173163 - TEC TEC MGP_NODShiLtJ_T0001698.1 MGP_NODShiLtJ_G0001612.1 mouse_genomes_project 5 118026090 118027226 + TEC TEC MGP_NODShiLtJ_T0001743.1 MGP_NODShiLtJ_G0001657.1 mouse_genomes_project 5 133824172 133826867 + TEC TEC MGP_NODShiLtJ_T0008325.1 MGP_NODShiLtJ_G0006748.1 mouse_genomes_project 5 146458281 146483057 - 5930412G12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008326.1 MGP_NODShiLtJ_G0006748.1 mouse_genomes_project 5 146458281 146466366 - 5930412G12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008327.1 MGP_NODShiLtJ_G0006748.1 mouse_genomes_project 5 146458303 146483057 - 5930412G12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008328.1 MGP_NODShiLtJ_G0006748.1 mouse_genomes_project 5 146458353 146466366 - 5930412G12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008329.1 MGP_NODShiLtJ_G0006748.1 mouse_genomes_project 5 146464044 146483063 - 5930412G12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008330.1 MGP_NODShiLtJ_G0006748.1 mouse_genomes_project 5 146465155 146483024 - 5930412G12Rik lincRNA lincRNA MGP_NODShiLtJ_T0001674.1 MGP_NODShiLtJ_G0001588.1 mouse_genomes_project 5 105086252 105087216 - TEC TEC MGP_NODShiLtJ_T0073049.1 MGP_NODShiLtJ_G0029714.1 mouse_genomes_project 5 129253496 129267401 - MGP_NODShiLtJ_P0073049 Crybb2 protein_coding protein_coding MGP_NODShiLtJ_T0073050.1 MGP_NODShiLtJ_G0029714.1 mouse_genomes_project 5 129253503 129266050 - MGP_NODShiLtJ_P0073050 Crybb2 protein_coding protein_coding MGP_NODShiLtJ_T0073051.1 MGP_NODShiLtJ_G0029714.1 mouse_genomes_project 5 129260418 129265741 - Crybb2 protein_coding processed_transcript MGP_NODShiLtJ_T0073052.1 MGP_NODShiLtJ_G0029714.1 mouse_genomes_project 5 129265337 129266055 - Crybb2 protein_coding processed_transcript MGP_NODShiLtJ_T0073053.1 MGP_NODShiLtJ_G0029714.1 mouse_genomes_project 5 129265975 129266778 - Crybb2 protein_coding processed_transcript MGP_NODShiLtJ_T0001686.1 MGP_NODShiLtJ_G0001600.1 mouse_genomes_project 5 112168665 112170237 - TEC TEC MGP_NODShiLtJ_T0014796.1 MGP_NODShiLtJ_G0012904.1 mouse_genomes_project 5 27527207 27527319 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070969.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37599634 37725445 + MGP_NODShiLtJ_P0070969 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070970.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37599634 37725952 + MGP_NODShiLtJ_P0070970 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070971.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37599678 37725128 + MGP_NODShiLtJ_P0070971 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070972.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37599685 37725952 + MGP_NODShiLtJ_P0070972 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070973.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37599685 37725444 + MGP_NODShiLtJ_P0070973 Ablim2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070974.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37599720 37725445 + MGP_NODShiLtJ_P0070974 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070975.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37599805 37724398 + MGP_NODShiLtJ_P0070975 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070976.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37656074 37684702 + MGP_NODShiLtJ_P0070976 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070977.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37656141 37724398 + MGP_NODShiLtJ_P0070977 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070978.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37656155 37674607 + MGP_NODShiLtJ_P0070978 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070979.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37669855 37715863 + MGP_NODShiLtJ_P0070979 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070980.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37669886 37683030 + Ablim2 protein_coding retained_intron MGP_NODShiLtJ_T0070981.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37669886 37699408 + MGP_NODShiLtJ_P0070981 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070982.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37682851 37699735 + MGP_NODShiLtJ_P0070982 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0070983.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37690324 37710490 + Ablim2 protein_coding retained_intron MGP_NODShiLtJ_T0070984.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37698614 37699735 + Ablim2 protein_coding retained_intron MGP_NODShiLtJ_T0070985.1 MGP_NODShiLtJ_G0029288.1 mouse_genomes_project 5 37699442 37724498 + MGP_NODShiLtJ_P0070985 Ablim2 protein_coding protein_coding MGP_NODShiLtJ_T0004627.1 MGP_NODShiLtJ_G0004003.1 mouse_genomes_project 5 46911179 46915510 + Gm42982 antisense antisense MGP_NODShiLtJ_T0075126.1 MGP_NODShiLtJ_G0030086.1 mouse_genomes_project 5 158515516 158517873 + Gpr146 protein_coding processed_transcript MGP_NODShiLtJ_T0075127.1 MGP_NODShiLtJ_G0030086.1 mouse_genomes_project 5 158515561 158517874 + Gpr146 protein_coding processed_transcript MGP_NODShiLtJ_T0075128.1 MGP_NODShiLtJ_G0030086.1 mouse_genomes_project 5 158515982 158531695 + MGP_NODShiLtJ_P0075128 Gpr146 protein_coding protein_coding MGP_NODShiLtJ_T0075129.1 MGP_NODShiLtJ_G0030086.1 mouse_genomes_project 5 158516039 158517079 + MGP_NODShiLtJ_P0075129 Gpr146 protein_coding protein_coding MGP_NODShiLtJ_T0075130.1 MGP_NODShiLtJ_G0030086.1 mouse_genomes_project 5 158518400 158535345 + MGP_NODShiLtJ_P0075130 Gpr146 protein_coding protein_coding MGP_NODShiLtJ_T0075131.1 MGP_NODShiLtJ_G0030086.1 mouse_genomes_project 5 158527560 158535344 + MGP_NODShiLtJ_P0075131 Gpr146 protein_coding protein_coding MGP_NODShiLtJ_T0001630.1 MGP_NODShiLtJ_G0001545.1 mouse_genomes_project 5 75508250 75509603 + TEC TEC MGP_NODShiLtJ_T0074333.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148198715 148251890 + MGP_NODShiLtJ_P0074333 Rabgef1 protein_coding protein_coding MGP_NODShiLtJ_T0074334.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148198741 148246925 + MGP_NODShiLtJ_P0074334 Rabgef1 protein_coding protein_coding MGP_NODShiLtJ_T0074335.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148216576 148245235 + MGP_NODShiLtJ_P0074335 Rabgef1 protein_coding protein_coding MGP_NODShiLtJ_T0074336.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148216576 148251885 + MGP_NODShiLtJ_P0074336 Rabgef1 protein_coding protein_coding MGP_NODShiLtJ_T0074337.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148216623 148243329 + Rabgef1 protein_coding processed_transcript MGP_NODShiLtJ_T0074338.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148216635 148220735 + Rabgef1 protein_coding retained_intron MGP_NODShiLtJ_T0074339.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148243291 148247474 + Rabgef1 protein_coding retained_intron MGP_NODShiLtJ_T0074340.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148248932 148250527 + Rabgef1 protein_coding retained_intron MGP_NODShiLtJ_T0074341.1 MGP_NODShiLtJ_G0029944.1 mouse_genomes_project 5 148250717 148251598 + MGP_NODShiLtJ_P0074341 Rabgef1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001806.1 MGP_NODShiLtJ_G0001719.1 mouse_genomes_project 5 149005414 149008814 - TEC TEC MGP_NODShiLtJ_T0001622.1 MGP_NODShiLtJ_G0001537.1 mouse_genomes_project 5 74515216 74517373 + TEC TEC MGP_NODShiLtJ_T0001805.1 MGP_NODShiLtJ_G0001718.1 mouse_genomes_project 5 148969195 148972542 - TEC TEC MGP_NODShiLtJ_T0001703.1 MGP_NODShiLtJ_G0001617.1 mouse_genomes_project 5 119929673 119930042 - TEC TEC MGP_NODShiLtJ_T0070246.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271269 30278413 + MGP_NODShiLtJ_P0070246 Rnf32 protein_coding protein_coding MGP_NODShiLtJ_T0070247.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271270 30304542 + MGP_NODShiLtJ_P0070247 Rnf32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070248.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271272 30274025 + MGP_NODShiLtJ_P0070248 Rnf32 protein_coding protein_coding MGP_NODShiLtJ_T0070249.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271274 30304583 + MGP_NODShiLtJ_P0070249 Rnf32 protein_coding protein_coding MGP_NODShiLtJ_T0070250.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271280 30278473 + MGP_NODShiLtJ_P0070250 Rnf32 protein_coding protein_coding MGP_NODShiLtJ_T0070251.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271283 30304585 + MGP_NODShiLtJ_P0070251 Rnf32 protein_coding protein_coding MGP_NODShiLtJ_T0070252.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271335 30283247 + Rnf32 protein_coding retained_intron MGP_NODShiLtJ_T0070253.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271361 30273269 + Rnf32 protein_coding processed_transcript MGP_NODShiLtJ_T0070254.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30271864 30278362 + MGP_NODShiLtJ_P0070254 Rnf32 protein_coding protein_coding MGP_NODShiLtJ_T0070255.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30273283 30304352 + MGP_NODShiLtJ_P0070255 Rnf32 protein_coding protein_coding MGP_NODShiLtJ_T0070256.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30273948 30304362 + MGP_NODShiLtJ_P0070256 Rnf32 protein_coding protein_coding MGP_NODShiLtJ_T0070257.1 MGP_NODShiLtJ_G0029175.1 mouse_genomes_project 5 30302846 30307518 + Rnf32 protein_coding retained_intron MGP_NODShiLtJ_T0072518.1 MGP_NODShiLtJ_G0029595.1 mouse_genomes_project 5 115370701 115371799 + MGP_NODShiLtJ_P0072518 Agpat9 protein_coding protein_coding MGP_NODShiLtJ_T0072519.1 MGP_NODShiLtJ_G0029595.1 mouse_genomes_project 5 115371118 115426913 + MGP_NODShiLtJ_P0072519 Agpat9 protein_coding protein_coding MGP_NODShiLtJ_T0072520.1 MGP_NODShiLtJ_G0029595.1 mouse_genomes_project 5 115371207 115426913 + MGP_NODShiLtJ_P0072520 Agpat9 protein_coding protein_coding MGP_NODShiLtJ_T0072521.1 MGP_NODShiLtJ_G0029595.1 mouse_genomes_project 5 115371352 115426916 + MGP_NODShiLtJ_P0072521 Agpat9 protein_coding protein_coding MGP_NODShiLtJ_T0072522.1 MGP_NODShiLtJ_G0029595.1 mouse_genomes_project 5 115371405 115371839 + MGP_NODShiLtJ_P0072522 Agpat9 protein_coding protein_coding MGP_NODShiLtJ_T0001628.1 MGP_NODShiLtJ_G0001543.1 mouse_genomes_project 5 75467275 75470754 - TEC TEC MGP_NODShiLtJ_T0074979.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157014419 157024042 - MGP_NODShiLtJ_P0074979 Mcm7 protein_coding protein_coding MGP_NODShiLtJ_T0074980.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157014436 157015554 - Mcm7 protein_coding retained_intron MGP_NODShiLtJ_T0074981.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157014436 157023438 - MGP_NODShiLtJ_P0074981 Mcm7 protein_coding protein_coding MGP_NODShiLtJ_T0074982.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157017897 157022001 - Mcm7 protein_coding retained_intron MGP_NODShiLtJ_T0074983.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157018293 157022886 - MGP_NODShiLtJ_P0074983 Mcm7 protein_coding protein_coding MGP_NODShiLtJ_T0074984.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157018546 157021263 - Mcm7 protein_coding retained_intron MGP_NODShiLtJ_T0074985.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157018715 157022637 - MGP_NODShiLtJ_P0074985 Mcm7 protein_coding protein_coding MGP_NODShiLtJ_T0074986.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157018716 157023435 - MGP_NODShiLtJ_P0074986 Mcm7 protein_coding protein_coding MGP_NODShiLtJ_T0074987.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157020828 157022281 - MGP_NODShiLtJ_P0074987 Mcm7 protein_coding protein_coding MGP_NODShiLtJ_T0074988.1 MGP_NODShiLtJ_G0030060.1 mouse_genomes_project 5 157021030 157022861 - MGP_NODShiLtJ_P0074988 Mcm7 protein_coding protein_coding MGP_NODShiLtJ_T0001824.1 MGP_NODShiLtJ_G0001737.1 mouse_genomes_project 5 150375292 150376928 - TEC TEC MGP_NODShiLtJ_T0072609.1 MGP_NODShiLtJ_G0029619.1 mouse_genomes_project 5 119890956 119941826 - MGP_NODShiLtJ_P0072609 Abcg3 protein_coding protein_coding MGP_NODShiLtJ_T0072610.1 MGP_NODShiLtJ_G0029619.1 mouse_genomes_project 5 119892246 119936457 - MGP_NODShiLtJ_P0072610 Abcg3 protein_coding protein_coding MGP_NODShiLtJ_T0099336.1 MGP_NODShiLtJ_G0037730.1 mouse_genomes_project 5 20620005 20620105 + Gm22755 snRNA snRNA MGP_NODShiLtJ_T0001551.1 MGP_NODShiLtJ_G0001467.1 mouse_genomes_project 5 55277341 55279149 - TEC TEC MGP_NODShiLtJ_T0069604.1 MGP_NODShiLtJ_G0029058.1 mouse_genomes_project 5 76496 79466 + MGP_NODShiLtJ_P0069604 protein_coding protein_coding MGP_NODShiLtJ_T0069605.1 MGP_NODShiLtJ_G0029058.1 mouse_genomes_project 5 78744 79450 + MGP_NODShiLtJ_P0069605 protein_coding protein_coding MGP_NODShiLtJ_T0069606.1 MGP_NODShiLtJ_G0029058.1 mouse_genomes_project 5 78928 143175 + MGP_NODShiLtJ_P0069606 protein_coding protein_coding MGP_NODShiLtJ_T0069607.1 MGP_NODShiLtJ_G0029058.1 mouse_genomes_project 5 79324 293503 + MGP_NODShiLtJ_P0069607 protein_coding protein_coding MGP_NODShiLtJ_T0069608.1 MGP_NODShiLtJ_G0029058.1 mouse_genomes_project 5 79379 292063 + MGP_NODShiLtJ_P0069608 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069609.1 MGP_NODShiLtJ_G0029058.1 mouse_genomes_project 5 238029 240257 + protein_coding retained_intron MGP_NODShiLtJ_T0014952.1 MGP_NODShiLtJ_G0013060.1 mouse_genomes_project 5 103767349 103767663 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001833.1 MGP_NODShiLtJ_G0001746.1 mouse_genomes_project 5 152387053 152388019 - TEC TEC MGP_NODShiLtJ_T0073180.1 MGP_NODShiLtJ_G0029738.1 mouse_genomes_project 5 130709692 130750252 + MGP_NODShiLtJ_P0073180 Ube3b protein_coding protein_coding MGP_NODShiLtJ_T0073181.1 MGP_NODShiLtJ_G0029738.1 mouse_genomes_project 5 130709911 130750251 + MGP_NODShiLtJ_P0073181 Ube3b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073182.1 MGP_NODShiLtJ_G0029738.1 mouse_genomes_project 5 130709918 130721245 + MGP_NODShiLtJ_P0073182 Ube3b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073183.1 MGP_NODShiLtJ_G0029738.1 mouse_genomes_project 5 130727867 130750251 + MGP_NODShiLtJ_P0073183 Ube3b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073184.1 MGP_NODShiLtJ_G0029738.1 mouse_genomes_project 5 130731808 130740219 + Ube3b protein_coding processed_transcript MGP_NODShiLtJ_T0004658.1 MGP_NODShiLtJ_G0004029.1 mouse_genomes_project 5 81939054 81939926 + 1700071G01Rik antisense antisense MGP_NODShiLtJ_T0073334.1 MGP_NODShiLtJ_G0029771.1 mouse_genomes_project 5 131949304 131956817 - MGP_NODShiLtJ_P0073334 Sirt4 protein_coding protein_coding MGP_NODShiLtJ_T0073335.1 MGP_NODShiLtJ_G0029771.1 mouse_genomes_project 5 131949304 131957245 - MGP_NODShiLtJ_P0073335 Sirt4 protein_coding protein_coding MGP_NODShiLtJ_T0073336.1 MGP_NODShiLtJ_G0029771.1 mouse_genomes_project 5 131949307 131952368 - Sirt4 protein_coding retained_intron MGP_NODShiLtJ_T0073337.1 MGP_NODShiLtJ_G0029771.1 mouse_genomes_project 5 131952589 131955376 - Sirt4 protein_coding retained_intron MGP_NODShiLtJ_T0073338.1 MGP_NODShiLtJ_G0029771.1 mouse_genomes_project 5 131952660 131956865 - Sirt4 protein_coding processed_transcript MGP_NODShiLtJ_T0073339.1 MGP_NODShiLtJ_G0029771.1 mouse_genomes_project 5 131954981 131956886 - Sirt4 protein_coding retained_intron MGP_NODShiLtJ_T0099384.1 MGP_NODShiLtJ_G0037778.1 mouse_genomes_project 5 122565198 122565300 + Gm22557 snRNA snRNA MGP_NODShiLtJ_T0073019.1 MGP_NODShiLtJ_G0029707.1 mouse_genomes_project 5 128466615 128504818 + MGP_NODShiLtJ_P0073019 Hps4 protein_coding protein_coding MGP_NODShiLtJ_T0073020.1 MGP_NODShiLtJ_G0029707.1 mouse_genomes_project 5 128466625 128468280 + Hps4 protein_coding processed_transcript MGP_NODShiLtJ_T0073021.1 MGP_NODShiLtJ_G0029707.1 mouse_genomes_project 5 128466627 128504818 + Hps4 protein_coding retained_intron MGP_NODShiLtJ_T0073022.1 MGP_NODShiLtJ_G0029707.1 mouse_genomes_project 5 128466627 128504818 + MGP_NODShiLtJ_P0073022 Hps4 protein_coding protein_coding MGP_NODShiLtJ_T0073023.1 MGP_NODShiLtJ_G0029707.1 mouse_genomes_project 5 128466632 128468420 + Hps4 protein_coding processed_transcript MGP_NODShiLtJ_T0073025.1 MGP_NODShiLtJ_G0029707.1 mouse_genomes_project 5 128495143 128496173 + Hps4 protein_coding retained_intron MGP_NODShiLtJ_T0073026.1 MGP_NODShiLtJ_G0029707.1 mouse_genomes_project 5 128501738 128504805 + Hps4 protein_coding retained_intron MGP_NODShiLtJ_T0001535.1 MGP_NODShiLtJ_G0001451.1 mouse_genomes_project 5 52463876 52465171 - TEC TEC MGP_NODShiLtJ_T0015030.1 MGP_NODShiLtJ_G0013138.1 mouse_genomes_project 5 139603551 139604092 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001740.1 MGP_NODShiLtJ_G0001654.1 mouse_genomes_project 5 133073160 133074527 - TEC TEC MGP_NODShiLtJ_T0072939.1 MGP_NODShiLtJ_G0029692.1 mouse_genomes_project 5 126646247 126653293 + MGP_NODShiLtJ_P0072939 Ddx51 protein_coding protein_coding MGP_NODShiLtJ_T0072940.1 MGP_NODShiLtJ_G0029692.1 mouse_genomes_project 5 126646342 126647942 + Ddx51 protein_coding retained_intron MGP_NODShiLtJ_T0072941.1 MGP_NODShiLtJ_G0029692.1 mouse_genomes_project 5 126647933 126648702 + Ddx51 protein_coding retained_intron MGP_NODShiLtJ_T0072942.1 MGP_NODShiLtJ_G0029692.1 mouse_genomes_project 5 126649431 126649907 + Ddx51 protein_coding retained_intron MGP_NODShiLtJ_T0072943.1 MGP_NODShiLtJ_G0029692.1 mouse_genomes_project 5 126649658 126650668 + MGP_NODShiLtJ_P0072943 Ddx51 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073842.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140251956 140382328 - MGP_NODShiLtJ_P0073842 Kdm2b protein_coding protein_coding MGP_NODShiLtJ_T0073843.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140251970 140382535 - MGP_NODShiLtJ_P0073843 Kdm2b protein_coding protein_coding MGP_NODShiLtJ_T0073844.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140251972 140381762 - MGP_NODShiLtJ_P0073844 Kdm2b protein_coding protein_coding MGP_NODShiLtJ_T0073845.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140252607 140383023 - MGP_NODShiLtJ_P0073845 Kdm2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073846.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140253002 140383052 - MGP_NODShiLtJ_P0073846 Kdm2b protein_coding protein_coding MGP_NODShiLtJ_T0073847.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140259758 140266808 - Kdm2b protein_coding retained_intron MGP_NODShiLtJ_T0073848.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140266230 140274346 - MGP_NODShiLtJ_P0073848 Kdm2b protein_coding protein_coding MGP_NODShiLtJ_T0073849.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140266357 140267956 - Kdm2b protein_coding retained_intron MGP_NODShiLtJ_T0073850.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140267938 140303446 - Kdm2b protein_coding processed_transcript MGP_NODShiLtJ_T0073851.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140269150 140307829 - Kdm2b protein_coding processed_transcript MGP_NODShiLtJ_T0073852.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140269160 140307270 - Kdm2b protein_coding retained_intron MGP_NODShiLtJ_T0073853.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140273612 140382321 - Kdm2b protein_coding retained_intron MGP_NODShiLtJ_T0073854.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140318499 140381765 - MGP_NODShiLtJ_P0073854 Kdm2b protein_coding protein_coding MGP_NODShiLtJ_T0073855.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140318602 140339701 - MGP_NODShiLtJ_P0073855 Kdm2b protein_coding protein_coding MGP_NODShiLtJ_T0073856.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140318685 140335191 - Kdm2b protein_coding processed_transcript MGP_NODShiLtJ_T0073857.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140320863 140340312 - Kdm2b protein_coding processed_transcript MGP_NODShiLtJ_T0073858.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140320883 140339185 - Kdm2b protein_coding processed_transcript MGP_NODShiLtJ_T0073859.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140327821 140382328 - Kdm2b protein_coding retained_intron MGP_NODShiLtJ_T0073860.1 MGP_NODShiLtJ_G0029860.1 mouse_genomes_project 5 140334931 140377154 - Kdm2b protein_coding processed_transcript MGP_NODShiLtJ_T0098417.1 MGP_NODShiLtJ_G0036821.1 mouse_genomes_project 5 162345642 162349939 - D430018E03Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0001666.1 MGP_NODShiLtJ_G0001580.1 mouse_genomes_project 5 91924539 91925486 + TEC TEC MGP_NODShiLtJ_T0015025.1 MGP_NODShiLtJ_G0013133.1 mouse_genomes_project 5 134006042 134006420 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099378.1 MGP_NODShiLtJ_G0037772.1 mouse_genomes_project 5 115014601 115014761 - Gm23173 snRNA snRNA MGP_NODShiLtJ_T0007974.1 MGP_NODShiLtJ_G0006506.1 mouse_genomes_project 5 6958114 6959897 - Gm15734 lincRNA lincRNA MGP_NODShiLtJ_T0015043.1 MGP_NODShiLtJ_G0013151.1 mouse_genomes_project 5 153389454 153389626 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014994.1 MGP_NODShiLtJ_G0013102.1 mouse_genomes_project 5 123391145 123391567 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071619.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841111 74869702 + MGP_NODShiLtJ_P0071619 Tmem33 protein_coding protein_coding MGP_NODShiLtJ_T0071620.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841197 74845162 + MGP_NODShiLtJ_P0071620 Tmem33 protein_coding protein_coding MGP_NODShiLtJ_T0071621.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841242 74864900 + MGP_NODShiLtJ_P0071621 Tmem33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071622.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841242 74849103 + MGP_NODShiLtJ_P0071622 Tmem33 protein_coding protein_coding MGP_NODShiLtJ_T0071623.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841243 74869702 + MGP_NODShiLtJ_P0071623 Tmem33 protein_coding protein_coding MGP_NODShiLtJ_T0071624.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841250 74844829 + MGP_NODShiLtJ_P0071624 Tmem33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071625.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841300 74843623 + Tmem33 protein_coding retained_intron MGP_NODShiLtJ_T0071626.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841351 74869702 + MGP_NODShiLtJ_P0071626 Tmem33 protein_coding protein_coding MGP_NODShiLtJ_T0071627.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841442 74849541 + Tmem33 protein_coding retained_intron MGP_NODShiLtJ_T0071628.1 MGP_NODShiLtJ_G0029396.1 mouse_genomes_project 5 74841535 74864466 + MGP_NODShiLtJ_P0071628 Tmem33 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100625.1 MGP_NODShiLtJ_G0039019.1 mouse_genomes_project 5 100279378 100279501 + Gm25066 snoRNA snoRNA MGP_NODShiLtJ_T0001419.1 MGP_NODShiLtJ_G0001338.1 mouse_genomes_project 5 12581453 12585530 + TEC TEC MGP_NODShiLtJ_T0014730.1 MGP_NODShiLtJ_G0012838.1 mouse_genomes_project 5 5400074 5400814 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001667.1 MGP_NODShiLtJ_G0001581.1 mouse_genomes_project 5 92290624 92291720 + TEC TEC MGP_NODShiLtJ_T0075625.1 MGP_NODShiLtJ_G0030201.1 mouse_genomes_project 5 168089250 168107312 - MGP_NODShiLtJ_P0075625 Slc46a3 protein_coding protein_coding MGP_NODShiLtJ_T0075626.1 MGP_NODShiLtJ_G0030201.1 mouse_genomes_project 5 168089254 168107312 - MGP_NODShiLtJ_P0075626 Slc46a3 protein_coding protein_coding MGP_NODShiLtJ_T0075627.1 MGP_NODShiLtJ_G0030201.1 mouse_genomes_project 5 168089372 168090737 - Slc46a3 protein_coding retained_intron MGP_NODShiLtJ_T0075628.1 MGP_NODShiLtJ_G0030201.1 mouse_genomes_project 5 168106379 168107312 - MGP_NODShiLtJ_P0075628 Slc46a3 protein_coding protein_coding MGP_NODShiLtJ_T0015060.1 MGP_NODShiLtJ_G0013168.1 mouse_genomes_project 5 157698326 157698878 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010625.1 MGP_NODShiLtJ_G0008758.1 mouse_genomes_project 5 157015158 157015242 - Mir25 miRNA miRNA MGP_NODShiLtJ_T0099394.1 MGP_NODShiLtJ_G0037788.1 mouse_genomes_project 5 139863813 139863914 + Gm22965 snRNA snRNA MGP_NODShiLtJ_T0072032.1 MGP_NODShiLtJ_G0029468.1 mouse_genomes_project 5 98234097 98337606 - MGP_NODShiLtJ_P0072032 Uba6 protein_coding protein_coding MGP_NODShiLtJ_T0072033.1 MGP_NODShiLtJ_G0029468.1 mouse_genomes_project 5 98237899 98337541 - MGP_NODShiLtJ_P0072033 Uba6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072034.1 MGP_NODShiLtJ_G0029468.1 mouse_genomes_project 5 98263513 98337542 - Uba6 protein_coding retained_intron MGP_NODShiLtJ_T0004727.1 MGP_NODShiLtJ_G0004077.1 mouse_genomes_project 5 131308791 131314975 - Gm13822 antisense antisense MGP_NODShiLtJ_T0097816.1 MGP_NODShiLtJ_G0036228.1 mouse_genomes_project 5 154106830 154107212 - pseudogene pseudogene MGP_NODShiLtJ_T0001445.1 MGP_NODShiLtJ_G0001363.1 mouse_genomes_project 5 26556444 26558469 - TEC TEC MGP_NODShiLtJ_T0001660.1 MGP_NODShiLtJ_G0001574.1 mouse_genomes_project 5 84107276 84107727 - TEC TEC MGP_NODShiLtJ_T0075707.1 MGP_NODShiLtJ_G0030214.1 mouse_genomes_project 5 170120380 170218918 + MGP_NODShiLtJ_P0075707 B3glct protein_coding protein_coding MGP_NODShiLtJ_T0075708.1 MGP_NODShiLtJ_G0030214.1 mouse_genomes_project 5 170191716 170207420 + B3glct protein_coding processed_transcript MGP_NODShiLtJ_T0075709.1 MGP_NODShiLtJ_G0030214.1 mouse_genomes_project 5 170210205 170216928 + B3glct protein_coding retained_intron MGP_NODShiLtJ_T0004659.1 MGP_NODShiLtJ_G0004030.1 mouse_genomes_project 5 82890089 82905512 + Usp46os1 antisense antisense MGP_NODShiLtJ_T0014799.1 MGP_NODShiLtJ_G0012907.1 mouse_genomes_project 5 27961288 27962970 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001832.1 MGP_NODShiLtJ_G0001745.1 mouse_genomes_project 5 151697358 151698280 + TEC TEC MGP_NODShiLtJ_T0073796.1 MGP_NODShiLtJ_G0029855.1 mouse_genomes_project 5 140013080 140053443 + MGP_NODShiLtJ_P0073796 P2rx7 protein_coding protein_coding MGP_NODShiLtJ_T0073797.1 MGP_NODShiLtJ_G0029855.1 mouse_genomes_project 5 140013080 140053435 + MGP_NODShiLtJ_P0073797 P2rx7 protein_coding protein_coding MGP_NODShiLtJ_T0073798.1 MGP_NODShiLtJ_G0029855.1 mouse_genomes_project 5 140013108 140062147 + MGP_NODShiLtJ_P0073798 P2rx7 protein_coding protein_coding MGP_NODShiLtJ_T0073799.1 MGP_NODShiLtJ_G0029855.1 mouse_genomes_project 5 140013178 140024069 + MGP_NODShiLtJ_P0073799 P2rx7 protein_coding protein_coding MGP_NODShiLtJ_T0073800.1 MGP_NODShiLtJ_G0029855.1 mouse_genomes_project 5 140013334 140016962 + P2rx7 protein_coding processed_transcript MGP_NODShiLtJ_T0073801.1 MGP_NODShiLtJ_G0029855.1 mouse_genomes_project 5 140019210 140050527 + P2rx7 protein_coding processed_transcript MGP_NODShiLtJ_T0073802.1 MGP_NODShiLtJ_G0029855.1 mouse_genomes_project 5 140051095 140052693 + P2rx7 protein_coding processed_transcript MGP_NODShiLtJ_T0073803.1 MGP_NODShiLtJ_G0029855.1 mouse_genomes_project 5 140051335 140053430 + P2rx7 protein_coding retained_intron MGP_NODShiLtJ_T0001522.1 MGP_NODShiLtJ_G0001438.1 mouse_genomes_project 5 51643227 51644985 + TEC TEC MGP_NODShiLtJ_T0001797.1 MGP_NODShiLtJ_G0001710.1 mouse_genomes_project 5 146616642 146617311 - TEC TEC MGP_NODShiLtJ_T0001490.1 MGP_NODShiLtJ_G0001406.1 mouse_genomes_project 5 46161878 46166146 + TEC TEC MGP_NODShiLtJ_T0008146.1 MGP_NODShiLtJ_G0006634.1 mouse_genomes_project 5 112784603 112800391 - 1700010H22Rik lincRNA lincRNA MGP_NODShiLtJ_T0008147.1 MGP_NODShiLtJ_G0006634.1 mouse_genomes_project 5 112796237 112800469 - 1700010H22Rik lincRNA lincRNA MGP_NODShiLtJ_T0008148.1 MGP_NODShiLtJ_G0006634.1 mouse_genomes_project 5 112797653 112800227 - 1700010H22Rik lincRNA lincRNA MGP_NODShiLtJ_T0074952.1 MGP_NODShiLtJ_G0030052.1 mouse_genomes_project 5 156747691 156759402 - MGP_NODShiLtJ_P0074952 Gjc3 protein_coding protein_coding MGP_NODShiLtJ_T0074953.1 MGP_NODShiLtJ_G0030052.1 mouse_genomes_project 5 156758815 156759399 - Gjc3 protein_coding retained_intron MGP_NODShiLtJ_T0072848.1 MGP_NODShiLtJ_G0029674.1 mouse_genomes_project 5 125216963 125221028 - MGP_NODShiLtJ_P0072848 Crlf2 protein_coding protein_coding MGP_NODShiLtJ_T0072849.1 MGP_NODShiLtJ_G0029674.1 mouse_genomes_project 5 125216967 125221028 - MGP_NODShiLtJ_P0072849 Crlf2 protein_coding protein_coding MGP_NODShiLtJ_T0072850.1 MGP_NODShiLtJ_G0029674.1 mouse_genomes_project 5 125216969 125218613 - MGP_NODShiLtJ_P0072850 Crlf2 protein_coding protein_coding MGP_NODShiLtJ_T0010631.1 MGP_NODShiLtJ_G0008764.1 mouse_genomes_project 5 159671612 159671683 + Mir7038 miRNA miRNA MGP_NODShiLtJ_T0008333.1 MGP_NODShiLtJ_G0006750.1 mouse_genomes_project 5 149537936 149561069 - Gm42590 lincRNA lincRNA MGP_NODShiLtJ_T0001430.1 MGP_NODShiLtJ_G0001349.1 mouse_genomes_project 5 15535480 15538132 + TEC TEC MGP_NODShiLtJ_T0008223.1 MGP_NODShiLtJ_G0006683.1 mouse_genomes_project 5 128320200 128323333 + 1700028D13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008224.1 MGP_NODShiLtJ_G0006683.1 mouse_genomes_project 5 128320243 128323335 + 1700028D13Rik lincRNA lincRNA MGP_NODShiLtJ_T0018041.1 MGP_NODShiLtJ_G0015480.1 mouse_genomes_project 5 147795349 147806115 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018042.1 MGP_NODShiLtJ_G0015480.1 mouse_genomes_project 5 147795790 147805560 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018043.1 MGP_NODShiLtJ_G0015480.1 mouse_genomes_project 5 147798029 147800185 + processed_transcript retained_intron MGP_NODShiLtJ_T0018044.1 MGP_NODShiLtJ_G0015480.1 mouse_genomes_project 5 147801283 147802590 + processed_transcript retained_intron MGP_NODShiLtJ_T0018045.1 MGP_NODShiLtJ_G0015480.1 mouse_genomes_project 5 147802664 147805605 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018046.1 MGP_NODShiLtJ_G0015480.1 mouse_genomes_project 5 147804712 147805722 + processed_transcript processed_transcript MGP_NODShiLtJ_T0014968.1 MGP_NODShiLtJ_G0013076.1 mouse_genomes_project 5 113991894 113992703 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070136.1 MGP_NODShiLtJ_G0029148.1 mouse_genomes_project 5 25184599 25235171 + MGP_NODShiLtJ_P0070136 Agap3 protein_coding protein_coding MGP_NODShiLtJ_T0070137.1 MGP_NODShiLtJ_G0029148.1 mouse_genomes_project 5 25184629 25215235 + MGP_NODShiLtJ_P0070137 Agap3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070138.1 MGP_NODShiLtJ_G0029148.1 mouse_genomes_project 5 25184756 25214371 + Agap3 protein_coding processed_transcript MGP_NODShiLtJ_T0070139.1 MGP_NODShiLtJ_G0029148.1 mouse_genomes_project 5 25206294 25215227 + MGP_NODShiLtJ_P0070139 Agap3 protein_coding protein_coding MGP_NODShiLtJ_T0070140.1 MGP_NODShiLtJ_G0029148.1 mouse_genomes_project 5 25211840 25235161 + MGP_NODShiLtJ_P0070140 Agap3 protein_coding protein_coding MGP_NODShiLtJ_T0070141.1 MGP_NODShiLtJ_G0029148.1 mouse_genomes_project 5 25212259 25215225 + Agap3 protein_coding processed_transcript MGP_NODShiLtJ_T0072679.1 MGP_NODShiLtJ_G0029634.1 mouse_genomes_project 5 122200144 122221769 + MGP_NODShiLtJ_P0072679 Cdc7 protein_coding protein_coding MGP_NODShiLtJ_T0072680.1 MGP_NODShiLtJ_G0029634.1 mouse_genomes_project 5 122200144 122221770 + MGP_NODShiLtJ_P0072680 Cdc7 protein_coding protein_coding MGP_NODShiLtJ_T0072681.1 MGP_NODShiLtJ_G0029634.1 mouse_genomes_project 5 122200203 122221770 + MGP_NODShiLtJ_P0072681 Cdc7 protein_coding protein_coding MGP_NODShiLtJ_T0072682.1 MGP_NODShiLtJ_G0029634.1 mouse_genomes_project 5 122200214 122221770 + Cdc7 protein_coding retained_intron MGP_NODShiLtJ_T0072683.1 MGP_NODShiLtJ_G0029634.1 mouse_genomes_project 5 122200383 122221769 + MGP_NODShiLtJ_P0072683 Cdc7 protein_coding protein_coding MGP_NODShiLtJ_T0072684.1 MGP_NODShiLtJ_G0029634.1 mouse_genomes_project 5 122200840 122220693 + MGP_NODShiLtJ_P0072684 Cdc7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072685.1 MGP_NODShiLtJ_G0029634.1 mouse_genomes_project 5 122211916 122212563 + Cdc7 protein_coding processed_transcript MGP_NODShiLtJ_T0072686.1 MGP_NODShiLtJ_G0029634.1 mouse_genomes_project 5 122212608 122216679 + Cdc7 protein_coding retained_intron MGP_NODShiLtJ_T0004833.1 MGP_NODShiLtJ_G0004149.1 mouse_genomes_project 5 167552688 167555064 + Gm26597 antisense antisense MGP_NODShiLtJ_T0011492.1 MGP_NODShiLtJ_G0009625.1 mouse_genomes_project 5 114912555 114912734 + Gm27286 misc_RNA misc_RNA MGP_NODShiLtJ_T0071454.1 MGP_NODShiLtJ_G0029375.1 mouse_genomes_project 5 72491709 72531116 + MGP_NODShiLtJ_P0071454 Klhl5 protein_coding protein_coding MGP_NODShiLtJ_T0071455.1 MGP_NODShiLtJ_G0029375.1 mouse_genomes_project 5 72491785 72494573 + Klhl5 protein_coding retained_intron MGP_NODShiLtJ_T0071456.1 MGP_NODShiLtJ_G0029375.1 mouse_genomes_project 5 72492030 72531121 + MGP_NODShiLtJ_P0071456 Klhl5 protein_coding protein_coding MGP_NODShiLtJ_T0071457.1 MGP_NODShiLtJ_G0029375.1 mouse_genomes_project 5 72492036 72495523 + Klhl5 protein_coding processed_transcript MGP_NODShiLtJ_T0071458.1 MGP_NODShiLtJ_G0029375.1 mouse_genomes_project 5 72492304 72514614 + Klhl5 protein_coding processed_transcript MGP_NODShiLtJ_T0071459.1 MGP_NODShiLtJ_G0029375.1 mouse_genomes_project 5 72519060 72531116 + MGP_NODShiLtJ_P0071459 Klhl5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0008238.1 MGP_NODShiLtJ_G0006691.1 mouse_genomes_project 5 130216854 130219926 - lincRNA lincRNA MGP_NODShiLtJ_T0014821.1 MGP_NODShiLtJ_G0012929.1 mouse_genomes_project 5 34620044 34620259 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074017.1 MGP_NODShiLtJ_G0029887.1 mouse_genomes_project 5 141617810 141656616 - MGP_NODShiLtJ_P0074017 Abcb9 protein_coding protein_coding MGP_NODShiLtJ_T0074018.1 MGP_NODShiLtJ_G0029887.1 mouse_genomes_project 5 141618703 141639976 - Abcb9 protein_coding retained_intron MGP_NODShiLtJ_T0074019.1 MGP_NODShiLtJ_G0029887.1 mouse_genomes_project 5 141629635 141651109 - MGP_NODShiLtJ_P0074019 Abcb9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074020.1 MGP_NODShiLtJ_G0029887.1 mouse_genomes_project 5 141629639 141651109 - MGP_NODShiLtJ_P0074020 Abcb9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074021.1 MGP_NODShiLtJ_G0029887.1 mouse_genomes_project 5 141636963 141640665 - Abcb9 protein_coding processed_transcript MGP_NODShiLtJ_T0074022.1 MGP_NODShiLtJ_G0029887.1 mouse_genomes_project 5 141648781 141656604 - Abcb9 protein_coding retained_intron MGP_NODShiLtJ_T0098057.1 MGP_NODShiLtJ_G0036469.1 mouse_genomes_project 5 169085071 169085189 - n-R5s179 rRNA rRNA MGP_NODShiLtJ_T0075138.1 MGP_NODShiLtJ_G0030089.1 mouse_genomes_project 5 158612389 158625683 - MGP_NODShiLtJ_P0075138 Zfand2a protein_coding protein_coding MGP_NODShiLtJ_T0075139.1 MGP_NODShiLtJ_G0030089.1 mouse_genomes_project 5 158612394 158625651 - MGP_NODShiLtJ_P0075139 Zfand2a protein_coding protein_coding MGP_NODShiLtJ_T0075140.1 MGP_NODShiLtJ_G0030089.1 mouse_genomes_project 5 158616096 158620121 - Zfand2a protein_coding processed_transcript MGP_NODShiLtJ_T0075141.1 MGP_NODShiLtJ_G0030089.1 mouse_genomes_project 5 158619659 158625598 - MGP_NODShiLtJ_P0075141 Zfand2a protein_coding protein_coding MGP_NODShiLtJ_T0075142.1 MGP_NODShiLtJ_G0030089.1 mouse_genomes_project 5 158620254 158625562 - Zfand2a protein_coding processed_transcript MGP_NODShiLtJ_T0075311.1 MGP_NODShiLtJ_G0030128.1 mouse_genomes_project 5 162733041 162749495 + MGP_NODShiLtJ_P0075311 Zfp12 protein_coding protein_coding MGP_NODShiLtJ_T0075312.1 MGP_NODShiLtJ_G0030128.1 mouse_genomes_project 5 162733052 162750381 + MGP_NODShiLtJ_P0075312 Zfp12 protein_coding protein_coding MGP_NODShiLtJ_T0075313.1 MGP_NODShiLtJ_G0030128.1 mouse_genomes_project 5 162733125 162749503 + MGP_NODShiLtJ_P0075313 Zfp12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075314.1 MGP_NODShiLtJ_G0030128.1 mouse_genomes_project 5 162733657 162741627 + MGP_NODShiLtJ_P0075314 Zfp12 protein_coding protein_coding MGP_NODShiLtJ_T0075315.1 MGP_NODShiLtJ_G0030128.1 mouse_genomes_project 5 162741585 162746177 + Zfp12 protein_coding processed_transcript MGP_NODShiLtJ_T0001469.1 MGP_NODShiLtJ_G0001385.1 mouse_genomes_project 5 34550166 34551415 + TEC TEC MGP_NODShiLtJ_T0075658.1 MGP_NODShiLtJ_G0030206.1 mouse_genomes_project 5 169242315 169353232 - MGP_NODShiLtJ_P0075658 Gm42791 protein_coding protein_coding MGP_NODShiLtJ_T0075661.1 MGP_NODShiLtJ_G0030206.1 mouse_genomes_project 5 169338471 169339127 - Gm42791 protein_coding processed_transcript MGP_NODShiLtJ_T0075734.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171053757 171062864 + Brca2 protein_coding retained_intron MGP_NODShiLtJ_T0075735.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171053757 171112047 + MGP_NODShiLtJ_P0075735 Brca2 protein_coding protein_coding MGP_NODShiLtJ_T0075736.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171053759 171072225 + Brca2 protein_coding retained_intron MGP_NODShiLtJ_T0075737.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171053759 171074997 + MGP_NODShiLtJ_P0075737 Brca2 protein_coding protein_coding MGP_NODShiLtJ_T0075738.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171053771 171112048 + MGP_NODShiLtJ_P0075738 Brca2 protein_coding protein_coding MGP_NODShiLtJ_T0075739.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171053817 171057812 + Brca2 protein_coding processed_transcript MGP_NODShiLtJ_T0075740.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171062198 171065426 + Brca2 protein_coding processed_transcript MGP_NODShiLtJ_T0075741.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171094013 171096289 + Brca2 protein_coding retained_intron MGP_NODShiLtJ_T0075742.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171095564 171099219 + Brca2 protein_coding retained_intron MGP_NODShiLtJ_T0075743.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171098163 171099574 + Brca2 protein_coding retained_intron MGP_NODShiLtJ_T0075744.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171099289 171102404 + Brca2 protein_coding retained_intron MGP_NODShiLtJ_T0075745.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171108862 171112047 + Brca2 protein_coding processed_transcript MGP_NODShiLtJ_T0075746.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171109143 171111633 + Brca2 protein_coding retained_intron MGP_NODShiLtJ_T0075747.1 MGP_NODShiLtJ_G0030218.1 mouse_genomes_project 5 171110905 171112630 + Brca2 protein_coding retained_intron MGP_NODShiLtJ_T0072533.1 MGP_NODShiLtJ_G0029599.1 mouse_genomes_project 5 117112242 117552561 + MGP_NODShiLtJ_P0072533 Arhgap24 protein_coding protein_coding MGP_NODShiLtJ_T0072534.1 MGP_NODShiLtJ_G0029599.1 mouse_genomes_project 5 117112242 117552560 + MGP_NODShiLtJ_P0072534 Arhgap24 protein_coding protein_coding MGP_NODShiLtJ_T0072535.1 MGP_NODShiLtJ_G0029599.1 mouse_genomes_project 5 117112381 117311494 + Arhgap24 protein_coding retained_intron MGP_NODShiLtJ_T0072536.1 MGP_NODShiLtJ_G0029599.1 mouse_genomes_project 5 117307689 117552561 + MGP_NODShiLtJ_P0072536 Arhgap24 protein_coding protein_coding MGP_NODShiLtJ_T0072537.1 MGP_NODShiLtJ_G0029599.1 mouse_genomes_project 5 117366547 117552561 + MGP_NODShiLtJ_P0072537 Arhgap24 protein_coding protein_coding MGP_NODShiLtJ_T0072538.1 MGP_NODShiLtJ_G0029599.1 mouse_genomes_project 5 117414224 117552562 + MGP_NODShiLtJ_P0072538 Arhgap24 protein_coding protein_coding MGP_NODShiLtJ_T0072539.1 MGP_NODShiLtJ_G0029599.1 mouse_genomes_project 5 117458513 117528899 + Arhgap24 protein_coding processed_transcript MGP_NODShiLtJ_T0072540.1 MGP_NODShiLtJ_G0029599.1 mouse_genomes_project 5 117497495 117552561 + MGP_NODShiLtJ_P0072540 Arhgap24 protein_coding protein_coding MGP_NODShiLtJ_T0014972.1 MGP_NODShiLtJ_G0013080.1 mouse_genomes_project 5 115877420 115877712 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015097.1 MGP_NODShiLtJ_G0013205.1 mouse_genomes_project 5 168920057 168920235 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070817.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092280 36109450 + MGP_NODShiLtJ_P0070817 Rnf4 protein_coding protein_coding MGP_NODShiLtJ_T0070818.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092319 36106489 + Rnf4 protein_coding retained_intron MGP_NODShiLtJ_T0070819.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092371 36109447 + MGP_NODShiLtJ_P0070819 Rnf4 protein_coding protein_coding MGP_NODShiLtJ_T0070820.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092381 36105995 + Rnf4 protein_coding processed_transcript MGP_NODShiLtJ_T0070821.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092408 36103091 + Rnf4 protein_coding retained_intron MGP_NODShiLtJ_T0070822.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092410 36098613 + Rnf4 protein_coding processed_transcript MGP_NODShiLtJ_T0070823.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092415 36103383 + Rnf4 protein_coding retained_intron MGP_NODShiLtJ_T0070824.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092437 36105830 + Rnf4 protein_coding retained_intron MGP_NODShiLtJ_T0070825.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092676 36105992 + MGP_NODShiLtJ_P0070825 Rnf4 protein_coding protein_coding MGP_NODShiLtJ_T0070826.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36092923 36109435 + MGP_NODShiLtJ_P0070826 Rnf4 protein_coding protein_coding MGP_NODShiLtJ_T0070827.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36093310 36098649 + Rnf4 protein_coding processed_transcript MGP_NODShiLtJ_T0070828.1 MGP_NODShiLtJ_G0029267.1 mouse_genomes_project 5 36107126 36111641 + Rnf4 protein_coding retained_intron MGP_NODShiLtJ_T0001747.1 MGP_NODShiLtJ_G0001661.1 mouse_genomes_project 5 135405904 135407250 - TEC TEC MGP_NODShiLtJ_T0001461.1 MGP_NODShiLtJ_G0001378.1 mouse_genomes_project 5 33266208 33266903 + TEC TEC MGP_NODShiLtJ_T0071693.1 MGP_NODShiLtJ_G0029411.1 mouse_genomes_project 5 80180108 80283239 - MGP_NODShiLtJ_P0071693 Gabra4 protein_coding protein_coding MGP_NODShiLtJ_T0071694.1 MGP_NODShiLtJ_G0029411.1 mouse_genomes_project 5 80181569 80282912 - MGP_NODShiLtJ_P0071694 Gabra4 protein_coding protein_coding MGP_NODShiLtJ_T0071695.1 MGP_NODShiLtJ_G0029411.1 mouse_genomes_project 5 80181974 80282821 - MGP_NODShiLtJ_P0071695 Gabra4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071696.1 MGP_NODShiLtJ_G0029411.1 mouse_genomes_project 5 80182423 80282806 - MGP_NODShiLtJ_P0071696 Gabra4 protein_coding protein_coding MGP_NODShiLtJ_T0071697.1 MGP_NODShiLtJ_G0029411.1 mouse_genomes_project 5 80280117 80282751 - Gabra4 protein_coding retained_intron MGP_NODShiLtJ_T0001566.1 MGP_NODShiLtJ_G0001482.1 mouse_genomes_project 5 59886875 59892152 + TEC TEC MGP_NODShiLtJ_T0072139.1 MGP_NODShiLtJ_G0029512.1 mouse_genomes_project 5 101443305 101462759 - MGP_NODShiLtJ_P0072139 Grsf1 protein_coding protein_coding MGP_NODShiLtJ_T0072140.1 MGP_NODShiLtJ_G0029512.1 mouse_genomes_project 5 101445539 101463433 - MGP_NODShiLtJ_P0072140 Grsf1 protein_coding protein_coding MGP_NODShiLtJ_T0072141.1 MGP_NODShiLtJ_G0029512.1 mouse_genomes_project 5 101448626 101458667 - Grsf1 protein_coding retained_intron MGP_NODShiLtJ_T0072142.1 MGP_NODShiLtJ_G0029512.1 mouse_genomes_project 5 101460969 101462461 - Grsf1 protein_coding processed_transcript MGP_NODShiLtJ_T0004645.1 MGP_NODShiLtJ_G0004018.1 mouse_genomes_project 5 73651353 73680144 - 1700126H18Rik antisense antisense MGP_NODShiLtJ_T0069908.1 MGP_NODShiLtJ_G0029107.1 mouse_genomes_project 5 17607831 17686052 - MGP_NODShiLtJ_P0069908 Cd36 protein_coding protein_coding MGP_NODShiLtJ_T0069909.1 MGP_NODShiLtJ_G0029107.1 mouse_genomes_project 5 17608157 17667326 - MGP_NODShiLtJ_P0069909 Cd36 protein_coding protein_coding MGP_NODShiLtJ_T0069910.1 MGP_NODShiLtJ_G0029107.1 mouse_genomes_project 5 17608508 17734881 - MGP_NODShiLtJ_P0069910 Cd36 protein_coding protein_coding MGP_NODShiLtJ_T0069911.1 MGP_NODShiLtJ_G0029107.1 mouse_genomes_project 5 17608510 17685989 - MGP_NODShiLtJ_P0069911 Cd36 protein_coding protein_coding MGP_NODShiLtJ_T0069912.1 MGP_NODShiLtJ_G0029107.1 mouse_genomes_project 5 17608627 17667347 - MGP_NODShiLtJ_P0069912 Cd36 protein_coding protein_coding MGP_NODShiLtJ_T0069913.1 MGP_NODShiLtJ_G0029107.1 mouse_genomes_project 5 17644165 17734935 - MGP_NODShiLtJ_P0069913 Cd36 protein_coding protein_coding MGP_NODShiLtJ_T0072075.1 MGP_NODShiLtJ_G0029486.1 mouse_genomes_project 5 99888346 99929715 - MGP_NODShiLtJ_P0072075 Ugt2a1 protein_coding protein_coding MGP_NODShiLtJ_T0075555.1 MGP_NODShiLtJ_G0030186.1 mouse_genomes_project 5 166809454 166870528 - MGP_NODShiLtJ_P0075555 Usp12 protein_coding protein_coding MGP_NODShiLtJ_T0075556.1 MGP_NODShiLtJ_G0030186.1 mouse_genomes_project 5 166809484 166830017 - Usp12 protein_coding processed_transcript MGP_NODShiLtJ_T0075557.1 MGP_NODShiLtJ_G0030186.1 mouse_genomes_project 5 166817469 166830025 - Usp12 protein_coding processed_transcript MGP_NODShiLtJ_T0073900.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140696640 140795796 + MGP_NODShiLtJ_P0073900 Wdr66 protein_coding protein_coding MGP_NODShiLtJ_T0073901.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140696919 140795106 + MGP_NODShiLtJ_P0073901 Wdr66 protein_coding protein_coding MGP_NODShiLtJ_T0073902.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140728620 140759326 + Wdr66 protein_coding retained_intron MGP_NODShiLtJ_T0073903.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140728620 140755366 + MGP_NODShiLtJ_P0073903 Wdr66 protein_coding protein_coding MGP_NODShiLtJ_T0073904.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140730494 140759277 + Wdr66 protein_coding retained_intron MGP_NODShiLtJ_T0073905.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140735157 140736615 + Wdr66 protein_coding retained_intron MGP_NODShiLtJ_T0073906.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140747779 140795106 + MGP_NODShiLtJ_P0073906 Wdr66 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073907.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140755452 140794942 + MGP_NODShiLtJ_P0073907 Wdr66 protein_coding protein_coding MGP_NODShiLtJ_T0073908.1 MGP_NODShiLtJ_G0029868.1 mouse_genomes_project 5 140765191 140794961 + Wdr66 protein_coding retained_intron MGP_NODShiLtJ_T0070545.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32494620 32538395 - MGP_NODShiLtJ_P0070545 Ift172 protein_coding protein_coding MGP_NODShiLtJ_T0070546.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32494623 32495997 - Ift172 protein_coding retained_intron MGP_NODShiLtJ_T0070547.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32494896 32496154 - Ift172 protein_coding retained_intron MGP_NODShiLtJ_T0070548.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32507039 32507805 - Ift172 protein_coding retained_intron MGP_NODShiLtJ_T0070549.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32507913 32510482 - Ift172 protein_coding retained_intron MGP_NODShiLtJ_T0070550.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32509390 32510190 - Ift172 protein_coding retained_intron MGP_NODShiLtJ_T0070551.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32512899 32527677 - MGP_NODShiLtJ_P0070551 Ift172 protein_coding protein_coding MGP_NODShiLtJ_T0070552.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32518160 32528698 - MGP_NODShiLtJ_P0070552 Ift172 protein_coding protein_coding MGP_NODShiLtJ_T0070553.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32522765 32538327 - Ift172 protein_coding retained_intron MGP_NODShiLtJ_T0070554.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32532759 32533872 - Ift172 protein_coding retained_intron MGP_NODShiLtJ_T0070555.1 MGP_NODShiLtJ_G0029224.1 mouse_genomes_project 5 32533399 32538404 - MGP_NODShiLtJ_P0070555 Ift172 protein_coding protein_coding MGP_NODShiLtJ_T0008125.1 MGP_NODShiLtJ_G0006614.1 mouse_genomes_project 5 99040248 99057686 - Gm43057 lincRNA lincRNA MGP_NODShiLtJ_T0004574.1 MGP_NODShiLtJ_G0003960.1 mouse_genomes_project 5 5603567 5618020 - Gm15731 antisense antisense MGP_NODShiLtJ_T0014944.1 MGP_NODShiLtJ_G0013052.1 mouse_genomes_project 5 100949521 100949900 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008411.1 MGP_NODShiLtJ_G0006810.1 mouse_genomes_project 5 171853181 171861115 + Gm42904 lincRNA lincRNA MGP_NODShiLtJ_T0098206.1 MGP_NODShiLtJ_G0036618.1 mouse_genomes_project 5 141024236 141024373 + Gm24682 scaRNA scaRNA MGP_NODShiLtJ_T0004760.1 MGP_NODShiLtJ_G0004099.1 mouse_genomes_project 5 139129512 139130146 + 1700008B11Rik antisense antisense MGP_NODShiLtJ_T0074864.1 MGP_NODShiLtJ_G0030035.1 mouse_genomes_project 5 156321628 156326547 - MGP_NODShiLtJ_P0074864 Mospd3 protein_coding protein_coding MGP_NODShiLtJ_T0074865.1 MGP_NODShiLtJ_G0030035.1 mouse_genomes_project 5 156321628 156326883 - MGP_NODShiLtJ_P0074865 Mospd3 protein_coding protein_coding MGP_NODShiLtJ_T0074866.1 MGP_NODShiLtJ_G0030035.1 mouse_genomes_project 5 156322138 156326639 - Mospd3 protein_coding processed_transcript MGP_NODShiLtJ_T0074867.1 MGP_NODShiLtJ_G0030035.1 mouse_genomes_project 5 156322190 156326897 - MGP_NODShiLtJ_P0074867 Mospd3 protein_coding protein_coding MGP_NODShiLtJ_T0074868.1 MGP_NODShiLtJ_G0030035.1 mouse_genomes_project 5 156325872 156326563 - MGP_NODShiLtJ_P0074868 Mospd3 protein_coding protein_coding MGP_NODShiLtJ_T0074869.1 MGP_NODShiLtJ_G0030035.1 mouse_genomes_project 5 156325921 156326530 - Mospd3 protein_coding retained_intron MGP_NODShiLtJ_T0073319.1 MGP_NODShiLtJ_G0029768.1 mouse_genomes_project 5 131792000 131796395 - MGP_NODShiLtJ_P0073319 Cox6a1 protein_coding protein_coding MGP_NODShiLtJ_T0073320.1 MGP_NODShiLtJ_G0029768.1 mouse_genomes_project 5 131792015 131796328 - Cox6a1 protein_coding retained_intron MGP_NODShiLtJ_T0001499.1 MGP_NODShiLtJ_G0001415.1 mouse_genomes_project 5 46916016 46916831 + TEC TEC MGP_NODShiLtJ_T0001858.1 MGP_NODShiLtJ_G0001770.1 mouse_genomes_project 5 163043255 163044344 + TEC TEC MGP_NODShiLtJ_T0001756.1 MGP_NODShiLtJ_G0001670.1 mouse_genomes_project 5 137538551 137539536 - TEC TEC MGP_NODShiLtJ_T0074014.1 MGP_NODShiLtJ_G0029886.1 mouse_genomes_project 5 141544973 141572710 - MGP_NODShiLtJ_P0074014 Vps37b protein_coding protein_coding MGP_NODShiLtJ_T0074015.1 MGP_NODShiLtJ_G0029886.1 mouse_genomes_project 5 141546468 141552079 - Vps37b protein_coding processed_transcript MGP_NODShiLtJ_T0074016.1 MGP_NODShiLtJ_G0029886.1 mouse_genomes_project 5 141568180 141572698 - Vps37b protein_coding processed_transcript MGP_NODShiLtJ_T0001468.1 MGP_NODShiLtJ_G0001384.1 mouse_genomes_project 5 34337708 34338762 - TEC TEC MGP_NODShiLtJ_T0010563.1 MGP_NODShiLtJ_G0008696.1 mouse_genomes_project 5 25339051 25339149 + Mir671 miRNA miRNA MGP_NODShiLtJ_T0001530.1 MGP_NODShiLtJ_G0001446.1 mouse_genomes_project 5 52352397 52352771 - TEC pseudogene MGP_NODShiLtJ_T0073443.1 MGP_NODShiLtJ_G0029787.1 mouse_genomes_project 5 134066280 134076883 + Wsb2 protein_coding retained_intron MGP_NODShiLtJ_T0073444.1 MGP_NODShiLtJ_G0029787.1 mouse_genomes_project 5 134067544 134090991 + MGP_NODShiLtJ_P0073444 Wsb2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0073445.1 MGP_NODShiLtJ_G0029787.1 mouse_genomes_project 5 134071118 134081014 + Wsb2 protein_coding processed_transcript MGP_NODShiLtJ_T0073446.1 MGP_NODShiLtJ_G0029787.1 mouse_genomes_project 5 134073618 134087696 + MGP_NODShiLtJ_P0073446 Wsb2 protein_coding protein_coding MGP_NODShiLtJ_T0073447.1 MGP_NODShiLtJ_G0029787.1 mouse_genomes_project 5 134085767 134087596 + Wsb2 protein_coding retained_intron MGP_NODShiLtJ_T0073448.1 MGP_NODShiLtJ_G0029787.1 mouse_genomes_project 5 134086565 134087631 + Wsb2 protein_coding retained_intron MGP_NODShiLtJ_T0015101.1 MGP_NODShiLtJ_G0013209.1 mouse_genomes_project 5 170747227 170747615 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070864.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404138 36407686 - MGP_NODShiLtJ_P0070864 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0070865.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404142 36407709 - MGP_NODShiLtJ_P0070865 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0070866.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404143 36405224 - Mfsd10 protein_coding retained_intron MGP_NODShiLtJ_T0070867.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404144 36405126 - Mfsd10 protein_coding retained_intron MGP_NODShiLtJ_T0070868.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404145 36407689 - MGP_NODShiLtJ_P0070868 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0070869.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404221 36407304 - MGP_NODShiLtJ_P0070869 Mfsd10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070870.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404411 36405388 - Mfsd10 protein_coding retained_intron MGP_NODShiLtJ_T0070871.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404491 36406621 - Mfsd10 protein_coding retained_intron MGP_NODShiLtJ_T0070872.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36404810 36406022 - MGP_NODShiLtJ_P0070872 Mfsd10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070873.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405127 36405562 - MGP_NODShiLtJ_P0070873 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0070874.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405151 36406613 - MGP_NODShiLtJ_P0070874 Mfsd10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070875.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405347 36406252 - MGP_NODShiLtJ_P0070875 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0070876.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405428 36407686 - MGP_NODShiLtJ_P0070876 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0070877.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405553 36407338 - MGP_NODShiLtJ_P0070877 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0070878.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405560 36406120 - MGP_NODShiLtJ_P0070878 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0070879.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405584 36405998 - Mfsd10 protein_coding retained_intron MGP_NODShiLtJ_T0070880.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405606 36407622 - MGP_NODShiLtJ_P0070880 Mfsd10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070881.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36405882 36407019 - Mfsd10 protein_coding processed_transcript MGP_NODShiLtJ_T0070882.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36406109 36407032 - Mfsd10 protein_coding processed_transcript MGP_NODShiLtJ_T0070883.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36406525 36407557 - Mfsd10 protein_coding retained_intron MGP_NODShiLtJ_T0070884.1 MGP_NODShiLtJ_G0029272.1 mouse_genomes_project 5 36407090 36407637 - MGP_NODShiLtJ_P0070884 Mfsd10 protein_coding protein_coding MGP_NODShiLtJ_T0007980.1 MGP_NODShiLtJ_G0006510.1 mouse_genomes_project 5 18438585 18448138 - Gm43030 lincRNA lincRNA MGP_NODShiLtJ_T0101961.1 MGP_NODShiLtJ_G0040129.1 mouse_genomes_project 5 125214199 125216412 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001650.1 MGP_NODShiLtJ_G0001564.1 mouse_genomes_project 5 82480114 82480693 - TEC TEC MGP_NODShiLtJ_T0101962.1 MGP_NODShiLtJ_G0040130.1 mouse_genomes_project 5 143501408 143502091 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011501.1 MGP_NODShiLtJ_G0009634.1 mouse_genomes_project 5 134996313 134996603 - Gm24050 misc_RNA misc_RNA MGP_NODShiLtJ_T0014965.1 MGP_NODShiLtJ_G0013073.1 mouse_genomes_project 5 112338269 112339265 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072227.1 MGP_NODShiLtJ_G0029538.1 mouse_genomes_project 5 104412078 104465247 - MGP_NODShiLtJ_P0072227 Btc protein_coding protein_coding MGP_NODShiLtJ_T0072228.1 MGP_NODShiLtJ_G0029538.1 mouse_genomes_project 5 104412206 104465075 - Btc protein_coding retained_intron MGP_NODShiLtJ_T0072229.1 MGP_NODShiLtJ_G0029538.1 mouse_genomes_project 5 104413736 104465113 - MGP_NODShiLtJ_P0072229 Btc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072230.1 MGP_NODShiLtJ_G0029538.1 mouse_genomes_project 5 104420608 104433489 - Btc protein_coding processed_transcript MGP_NODShiLtJ_T0098392.1 MGP_NODShiLtJ_G0036797.1 mouse_genomes_project 5 2279347 2284118 - Gm10484 sense_intronic sense_intronic MGP_NODShiLtJ_T0008068.1 MGP_NODShiLtJ_G0006570.1 mouse_genomes_project 5 58403752 58412512 + Gm10440 lincRNA lincRNA MGP_NODShiLtJ_T0001826.1 MGP_NODShiLtJ_G0001739.1 mouse_genomes_project 5 150609174 150612037 - TEC TEC MGP_NODShiLtJ_T0014793.1 MGP_NODShiLtJ_G0012901.1 mouse_genomes_project 5 26580048 26580409 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008159.1 MGP_NODShiLtJ_G0006643.1 mouse_genomes_project 5 114900639 114912762 - 5430416N02Rik lincRNA lincRNA MGP_NODShiLtJ_T0008160.1 MGP_NODShiLtJ_G0006643.1 mouse_genomes_project 5 114903453 114912743 - 5430416N02Rik lincRNA lincRNA MGP_NODShiLtJ_T0008161.1 MGP_NODShiLtJ_G0006643.1 mouse_genomes_project 5 114911962 114912602 - 5430416N02Rik lincRNA lincRNA MGP_NODShiLtJ_T0008162.1 MGP_NODShiLtJ_G0006643.1 mouse_genomes_project 5 114912220 114912742 - 5430416N02Rik lincRNA lincRNA MGP_NODShiLtJ_T0001514.1 MGP_NODShiLtJ_G0001430.1 mouse_genomes_project 5 48612815 48616308 - TEC TEC MGP_NODShiLtJ_T0072631.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120863321 120983637 + MGP_NODShiLtJ_P0072631 Lrrc8d protein_coding protein_coding MGP_NODShiLtJ_T0072632.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120864141 120983632 + MGP_NODShiLtJ_P0072632 Lrrc8d protein_coding protein_coding MGP_NODShiLtJ_T0072633.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120864162 120892418 + Lrrc8d protein_coding retained_intron MGP_NODShiLtJ_T0072634.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120864218 120892416 + Lrrc8d protein_coding processed_transcript MGP_NODShiLtJ_T0072635.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120889566 120980259 + MGP_NODShiLtJ_P0072635 Lrrc8d protein_coding protein_coding MGP_NODShiLtJ_T0072636.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120889961 120980270 + MGP_NODShiLtJ_P0072636 Lrrc8d protein_coding protein_coding MGP_NODShiLtJ_T0072637.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120890167 120982061 + Lrrc8d protein_coding processed_transcript MGP_NODShiLtJ_T0072638.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120890240 120980426 + MGP_NODShiLtJ_P0072638 Lrrc8d protein_coding protein_coding MGP_NODShiLtJ_T0072639.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120890407 121001700 + Lrrc8d protein_coding processed_transcript MGP_NODShiLtJ_T0072640.1 MGP_NODShiLtJ_G0029628.1 mouse_genomes_project 5 120992799 121001699 + Lrrc8d protein_coding processed_transcript MGP_NODShiLtJ_T0075248.1 MGP_NODShiLtJ_G0030115.1 mouse_genomes_project 5 161905411 161964415 - MGP_NODShiLtJ_P0075248 Radil protein_coding protein_coding MGP_NODShiLtJ_T0075249.1 MGP_NODShiLtJ_G0030115.1 mouse_genomes_project 5 161905416 161971628 - Radil protein_coding retained_intron MGP_NODShiLtJ_T0075250.1 MGP_NODShiLtJ_G0030115.1 mouse_genomes_project 5 161905416 161965504 - MGP_NODShiLtJ_P0075250 Radil protein_coding protein_coding MGP_NODShiLtJ_T0075251.1 MGP_NODShiLtJ_G0030115.1 mouse_genomes_project 5 161905453 161971643 - MGP_NODShiLtJ_P0075251 Radil protein_coding protein_coding MGP_NODShiLtJ_T0075252.1 MGP_NODShiLtJ_G0030115.1 mouse_genomes_project 5 161907057 161908144 - Radil protein_coding retained_intron MGP_NODShiLtJ_T0075253.1 MGP_NODShiLtJ_G0030115.1 mouse_genomes_project 5 161928560 161929935 - MGP_NODShiLtJ_P0075253 Radil protein_coding protein_coding MGP_NODShiLtJ_T0075255.1 MGP_NODShiLtJ_G0030115.1 mouse_genomes_project 5 161964093 161971452 - MGP_NODShiLtJ_P0075255 Radil protein_coding protein_coding MGP_NODShiLtJ_T0001794.1 MGP_NODShiLtJ_G0001707.1 mouse_genomes_project 5 146138064 146141306 - TEC TEC MGP_NODShiLtJ_T0008011.1 MGP_NODShiLtJ_G0006528.1 mouse_genomes_project 5 31293613 31298860 + Gm4961 lincRNA lincRNA MGP_NODShiLtJ_T0001521.1 MGP_NODShiLtJ_G0001437.1 mouse_genomes_project 5 51554410 51556987 + TEC TEC MGP_NODShiLtJ_T0074870.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156332481 156338787 - Pcolce protein_coding retained_intron MGP_NODShiLtJ_T0074871.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156332481 156338866 - MGP_NODShiLtJ_P0074871 Pcolce protein_coding protein_coding MGP_NODShiLtJ_T0074872.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156332483 156333177 - Pcolce protein_coding retained_intron MGP_NODShiLtJ_T0074873.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156332483 156337853 - MGP_NODShiLtJ_P0074873 Pcolce protein_coding protein_coding MGP_NODShiLtJ_T0074874.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156332486 156338755 - MGP_NODShiLtJ_P0074874 Pcolce protein_coding protein_coding MGP_NODShiLtJ_T0074875.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156334396 156335571 - Pcolce protein_coding retained_intron MGP_NODShiLtJ_T0074876.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156334463 156338722 - Pcolce protein_coding processed_transcript MGP_NODShiLtJ_T0074877.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156334812 156338081 - MGP_NODShiLtJ_P0074877 Pcolce protein_coding protein_coding MGP_NODShiLtJ_T0074878.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156334888 156341144 - MGP_NODShiLtJ_P0074878 Pcolce protein_coding protein_coding MGP_NODShiLtJ_T0074879.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156334888 156341166 - MGP_NODShiLtJ_P0074879 Pcolce protein_coding protein_coding MGP_NODShiLtJ_T0074880.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156335099 156338698 - Pcolce protein_coding retained_intron MGP_NODShiLtJ_T0074881.1 MGP_NODShiLtJ_G0030036.1 mouse_genomes_project 5 156336317 156338705 - Pcolce protein_coding processed_transcript MGP_NODShiLtJ_T0074921.1 MGP_NODShiLtJ_G0030045.1 mouse_genomes_project 5 156525340 156538606 + MGP_NODShiLtJ_P0074921 Ppp1r35 protein_coding protein_coding MGP_NODShiLtJ_T0074922.1 MGP_NODShiLtJ_G0030045.1 mouse_genomes_project 5 156525395 156538954 + MGP_NODShiLtJ_P0074922 Ppp1r35 protein_coding protein_coding MGP_NODShiLtJ_T0074923.1 MGP_NODShiLtJ_G0030045.1 mouse_genomes_project 5 156525485 156538959 + MGP_NODShiLtJ_P0074923 Ppp1r35 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0074924.1 MGP_NODShiLtJ_G0030045.1 mouse_genomes_project 5 156538280 156538950 + MGP_NODShiLtJ_P0074924 Ppp1r35 protein_coding protein_coding MGP_NODShiLtJ_T0074925.1 MGP_NODShiLtJ_G0030045.1 mouse_genomes_project 5 156538387 156538954 + Ppp1r35 protein_coding retained_intron MGP_NODShiLtJ_T0008358.1 MGP_NODShiLtJ_G0006771.1 mouse_genomes_project 5 162839784 162840575 + Gm43397 lincRNA lincRNA MGP_NODShiLtJ_T0075549.1 MGP_NODShiLtJ_G0030184.1 mouse_genomes_project 5 166424123 166517224 + MGP_NODShiLtJ_P0075549 Wasf3 protein_coding protein_coding MGP_NODShiLtJ_T0072264.1 MGP_NODShiLtJ_G0029546.1 mouse_genomes_project 5 105391437 105424675 - MGP_NODShiLtJ_P0072264 Ppef2 protein_coding protein_coding MGP_NODShiLtJ_T0072265.1 MGP_NODShiLtJ_G0029546.1 mouse_genomes_project 5 105391447 105393776 - Ppef2 protein_coding processed_transcript MGP_NODShiLtJ_T0072266.1 MGP_NODShiLtJ_G0029546.1 mouse_genomes_project 5 105391732 105421556 - MGP_NODShiLtJ_P0072266 Ppef2 protein_coding protein_coding MGP_NODShiLtJ_T0008047.1 MGP_NODShiLtJ_G0006550.1 mouse_genomes_project 5 45623334 45635045 - Gm43700 lincRNA lincRNA MGP_NODShiLtJ_T0008376.1 MGP_NODShiLtJ_G0006787.1 mouse_genomes_project 5 169162351 169181036 + Gm15407 lincRNA lincRNA MGP_NODShiLtJ_T0008124.1 MGP_NODShiLtJ_G0006613.1 mouse_genomes_project 5 99000442 99095271 + Gm43055 lincRNA lincRNA MGP_NODShiLtJ_T0072062.1 MGP_NODShiLtJ_G0029478.1 mouse_genomes_project 5 99180322 99198825 - MGP_NODShiLtJ_P0072062 Ugt2b34 protein_coding protein_coding MGP_NODShiLtJ_T0072063.1 MGP_NODShiLtJ_G0029478.1 mouse_genomes_project 5 99180322 99198825 - MGP_NODShiLtJ_P0072063 Ugt2b34 protein_coding protein_coding MGP_NODShiLtJ_T0011487.1 MGP_NODShiLtJ_G0009620.1 mouse_genomes_project 5 102578039 102578363 + Gm25320 misc_RNA misc_RNA MGP_NODShiLtJ_T0001626.1 MGP_NODShiLtJ_G0001541.1 mouse_genomes_project 5 75251297 75252761 - TEC TEC MGP_NODShiLtJ_T0010610.1 MGP_NODShiLtJ_G0008743.1 mouse_genomes_project 5 141537184 141537263 + Mir7032 miRNA miRNA MGP_NODShiLtJ_T0008366.1 MGP_NODShiLtJ_G0006777.1 mouse_genomes_project 5 166640713 166654219 - Gm34333 lincRNA lincRNA MGP_NODShiLtJ_T0073433.1 MGP_NODShiLtJ_G0029785.1 mouse_genomes_project 5 133985725 133998268 - MGP_NODShiLtJ_P0073433 Pebp1 protein_coding protein_coding MGP_NODShiLtJ_T0073434.1 MGP_NODShiLtJ_G0029785.1 mouse_genomes_project 5 133986210 133998226 - MGP_NODShiLtJ_P0073434 Pebp1 protein_coding protein_coding MGP_NODShiLtJ_T0073435.1 MGP_NODShiLtJ_G0029785.1 mouse_genomes_project 5 133988403 133998211 - MGP_NODShiLtJ_P0073435 Pebp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073436.1 MGP_NODShiLtJ_G0029785.1 mouse_genomes_project 5 133996433 133998168 - Pebp1 protein_coding retained_intron MGP_NODShiLtJ_T0001699.1 MGP_NODShiLtJ_G0001613.1 mouse_genomes_project 5 118614598 118614923 - TEC TEC MGP_NODShiLtJ_T0101159.1 MGP_NODShiLtJ_G0039487.1 mouse_genomes_project 5 98177893 98178893 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101160.1 MGP_NODShiLtJ_G0039487.1 mouse_genomes_project 5 98177948 98179032 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0014778.1 MGP_NODShiLtJ_G0012886.1 mouse_genomes_project 5 23504575 23505162 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071886.1 MGP_NODShiLtJ_G0029445.1 mouse_genomes_project 5 85220190 85323286 - MGP_NODShiLtJ_P0071886 Clock protein_coding protein_coding MGP_NODShiLtJ_T0071887.1 MGP_NODShiLtJ_G0029445.1 mouse_genomes_project 5 85222512 85323042 - MGP_NODShiLtJ_P0071887 Clock protein_coding protein_coding MGP_NODShiLtJ_T0071888.1 MGP_NODShiLtJ_G0029445.1 mouse_genomes_project 5 85224188 85291092 - MGP_NODShiLtJ_P0071888 Clock protein_coding protein_coding MGP_NODShiLtJ_T0071889.1 MGP_NODShiLtJ_G0029445.1 mouse_genomes_project 5 85248309 85323248 - Clock protein_coding retained_intron MGP_NODShiLtJ_T0071890.1 MGP_NODShiLtJ_G0029445.1 mouse_genomes_project 5 85268579 85323266 - Clock protein_coding processed_transcript MGP_NODShiLtJ_T0071891.1 MGP_NODShiLtJ_G0029445.1 mouse_genomes_project 5 85289033 85323266 - Clock protein_coding retained_intron MGP_NODShiLtJ_T0008137.1 MGP_NODShiLtJ_G0006626.1 mouse_genomes_project 5 110902847 110914707 + Gm42601 lincRNA lincRNA MGP_NODShiLtJ_T0101141.1 MGP_NODShiLtJ_G0039474.1 mouse_genomes_project 5 25396754 25400274 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101142.1 MGP_NODShiLtJ_G0039474.1 mouse_genomes_project 5 25399097 25400148 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0070524.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32482204 32492910 + MGP_NODShiLtJ_P0070524 Nrbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070525.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32482204 32492904 + MGP_NODShiLtJ_P0070525 Nrbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070526.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32482217 32486305 + MGP_NODShiLtJ_P0070526 Nrbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070527.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32482235 32487179 + Nrbp1 protein_coding retained_intron MGP_NODShiLtJ_T0070528.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32482243 32486226 + MGP_NODShiLtJ_P0070528 Nrbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070529.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32482272 32489258 + MGP_NODShiLtJ_P0070529 Nrbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070530.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32484771 32485780 + Nrbp1 protein_coding retained_intron MGP_NODShiLtJ_T0070531.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32488766 32491325 + Nrbp1 protein_coding retained_intron MGP_NODShiLtJ_T0070532.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32490698 32492907 + Nrbp1 protein_coding retained_intron MGP_NODShiLtJ_T0070533.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32490934 32492077 + Nrbp1 protein_coding retained_intron MGP_NODShiLtJ_T0070534.1 MGP_NODShiLtJ_G0029222.1 mouse_genomes_project 5 32491688 32492793 + Nrbp1 protein_coding retained_intron MGP_NODShiLtJ_T0073458.1 MGP_NODShiLtJ_G0029790.1 mouse_genomes_project 5 134525982 134619749 + MGP_NODShiLtJ_P0073458 Nos1 protein_coding protein_coding MGP_NODShiLtJ_T0073459.1 MGP_NODShiLtJ_G0029790.1 mouse_genomes_project 5 134526005 134619379 + Nos1 protein_coding processed_transcript MGP_NODShiLtJ_T0073460.1 MGP_NODShiLtJ_G0029790.1 mouse_genomes_project 5 134593475 134726299 + MGP_NODShiLtJ_P0073460 Nos1 protein_coding protein_coding MGP_NODShiLtJ_T0073461.1 MGP_NODShiLtJ_G0029790.1 mouse_genomes_project 5 134593811 134721826 + MGP_NODShiLtJ_P0073461 Nos1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073462.1 MGP_NODShiLtJ_G0029790.1 mouse_genomes_project 5 134619406 134721373 + MGP_NODShiLtJ_P0073462 Nos1 protein_coding protein_coding MGP_NODShiLtJ_T0073463.1 MGP_NODShiLtJ_G0029790.1 mouse_genomes_project 5 134619411 134721277 + MGP_NODShiLtJ_P0073463 Nos1 protein_coding protein_coding MGP_NODShiLtJ_T0073464.1 MGP_NODShiLtJ_G0029790.1 mouse_genomes_project 5 134678502 134684981 + Nos1 protein_coding processed_transcript MGP_NODShiLtJ_T0004568.1 MGP_NODShiLtJ_G0003955.1 mouse_genomes_project 5 239937 250562 - Gm17590 antisense antisense MGP_NODShiLtJ_T0004569.1 MGP_NODShiLtJ_G0003955.1 mouse_genomes_project 5 240147 240255 - Gm17590 antisense antisense MGP_NODShiLtJ_T0071980.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91307394 91758764 + Adgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0071981.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91307865 92250408 + MGP_NODShiLtJ_P0071981 Adgrl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071982.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91308045 92107108 + Adgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0071983.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91308048 92107105 + Adgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0071984.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91308289 91370571 + Adgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0071985.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91308492 91843449 + Adgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0071986.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91308495 92230857 + MGP_NODShiLtJ_P0071986 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071987.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91308533 92250419 + MGP_NODShiLtJ_P0071987 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071988.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91308886 92250409 + MGP_NODShiLtJ_P0071988 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071989.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91309085 92250408 + Adgrl3 protein_coding processed_transcript MGP_NODShiLtJ_T0071990.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91309103 91965087 + Adgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0071991.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673856 92249107 + MGP_NODShiLtJ_P0071991 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071992.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673857 92249107 + MGP_NODShiLtJ_P0071992 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071993.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673857 92249107 + MGP_NODShiLtJ_P0071993 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071994.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673857 92249107 + MGP_NODShiLtJ_P0071994 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071995.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673857 92249107 + MGP_NODShiLtJ_P0071995 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071996.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673857 92249107 + MGP_NODShiLtJ_P0071996 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071997.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673857 92249107 + MGP_NODShiLtJ_P0071997 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071998.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673857 92249107 + MGP_NODShiLtJ_P0071998 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0071999.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673857 92249107 + MGP_NODShiLtJ_P0071999 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072000.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673865 91715997 + Adgrl3 protein_coding processed_transcript MGP_NODShiLtJ_T0072001.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673895 92249647 + MGP_NODShiLtJ_P0072001 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072002.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673895 92248976 + MGP_NODShiLtJ_P0072002 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072003.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673895 92248976 + MGP_NODShiLtJ_P0072003 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072004.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673895 92248976 + MGP_NODShiLtJ_P0072004 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072005.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91673920 92249476 + MGP_NODShiLtJ_P0072005 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072006.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91674008 92250408 + MGP_NODShiLtJ_P0072006 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072007.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 91674008 92250408 + MGP_NODShiLtJ_P0072007 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072008.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 92058492 92106887 + Adgrl3 protein_coding processed_transcript MGP_NODShiLtJ_T0072009.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 92076250 92250408 + MGP_NODShiLtJ_P0072009 Adgrl3 protein_coding protein_coding MGP_NODShiLtJ_T0072010.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 92147120 92149202 + Adgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0072011.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 92207206 92288856 + Adgrl3 protein_coding processed_transcript MGP_NODShiLtJ_T0072012.1 MGP_NODShiLtJ_G0029463.1 mouse_genomes_project 5 92229591 92231474 + Adgrl3 protein_coding retained_intron MGP_NODShiLtJ_T0072606.1 MGP_NODShiLtJ_G0029617.1 mouse_genomes_project 5 119293350 119308484 + MGP_NODShiLtJ_P0072606 BC005561 protein_coding protein_coding MGP_NODShiLtJ_T0073748.1 MGP_NODShiLtJ_G0029847.1 mouse_genomes_project 5 139676307 139708984 - MGP_NODShiLtJ_P0073748 Rad9b protein_coding protein_coding MGP_NODShiLtJ_T0073749.1 MGP_NODShiLtJ_G0029847.1 mouse_genomes_project 5 139678583 139706047 - MGP_NODShiLtJ_P0073749 Rad9b protein_coding protein_coding MGP_NODShiLtJ_T0073750.1 MGP_NODShiLtJ_G0029847.1 mouse_genomes_project 5 139678585 139708985 - MGP_NODShiLtJ_P0073750 Rad9b protein_coding protein_coding MGP_NODShiLtJ_T0073751.1 MGP_NODShiLtJ_G0029847.1 mouse_genomes_project 5 139706024 139707537 - MGP_NODShiLtJ_P0073751 Rad9b protein_coding protein_coding MGP_NODShiLtJ_T0073752.1 MGP_NODShiLtJ_G0029847.1 mouse_genomes_project 5 139707247 139708972 - Rad9b protein_coding retained_intron MGP_NODShiLtJ_T0001501.1 MGP_NODShiLtJ_G0001417.1 mouse_genomes_project 5 47204180 47212081 - TEC TEC MGP_NODShiLtJ_T0008296.1 MGP_NODShiLtJ_G0006730.1 mouse_genomes_project 5 142838047 142878623 - Gm42637 lincRNA lincRNA MGP_NODShiLtJ_T0071169.1 MGP_NODShiLtJ_G0029323.1 mouse_genomes_project 5 44600605 44740338 + MGP_NODShiLtJ_P0071169 Gm16223 protein_coding protein_coding MGP_NODShiLtJ_T0001567.1 MGP_NODShiLtJ_G0001483.1 mouse_genomes_project 5 60247862 60251566 - TEC TEC MGP_NODShiLtJ_T0010575.1 MGP_NODShiLtJ_G0008708.1 mouse_genomes_project 5 54973791 54973872 - Gm44377 miRNA miRNA MGP_NODShiLtJ_T0008390.1 MGP_NODShiLtJ_G0006798.1 mouse_genomes_project 5 169629373 169642224 - Gm29264 lincRNA lincRNA MGP_NODShiLtJ_T0014920.1 MGP_NODShiLtJ_G0013028.1 mouse_genomes_project 5 85488304 85489378 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011507.1 MGP_NODShiLtJ_G0009640.1 mouse_genomes_project 5 169642493 169642786 - Gm24105 misc_RNA misc_RNA MGP_NODShiLtJ_T0008308.1 MGP_NODShiLtJ_G0006736.1 mouse_genomes_project 5 144475297 144507438 + Gm43757 lincRNA lincRNA MGP_NODShiLtJ_T0008309.1 MGP_NODShiLtJ_G0006736.1 mouse_genomes_project 5 144475319 144480220 + Gm43757 lincRNA lincRNA MGP_NODShiLtJ_T0001847.1 MGP_NODShiLtJ_G0001759.1 mouse_genomes_project 5 157706791 157708293 + TEC TEC MGP_NODShiLtJ_T0074570.1 MGP_NODShiLtJ_G0029981.1 mouse_genomes_project 5 153723113 153784303 - MGP_NODShiLtJ_P0074570 Fkbp6 protein_coding protein_coding MGP_NODShiLtJ_T0074571.1 MGP_NODShiLtJ_G0029981.1 mouse_genomes_project 5 153723113 153784273 - MGP_NODShiLtJ_P0074571 Fkbp6 protein_coding protein_coding MGP_NODShiLtJ_T0074572.1 MGP_NODShiLtJ_G0029981.1 mouse_genomes_project 5 153771629 153784134 - MGP_NODShiLtJ_P0074572 Fkbp6 protein_coding protein_coding MGP_NODShiLtJ_T0074573.1 MGP_NODShiLtJ_G0029981.1 mouse_genomes_project 5 153771629 153784302 - MGP_NODShiLtJ_P0074573 Fkbp6 protein_coding protein_coding MGP_NODShiLtJ_T0072762.1 MGP_NODShiLtJ_G0029651.1 mouse_genomes_project 5 123447184 123473960 - MGP_NODShiLtJ_P0072762 Tmed5 protein_coding protein_coding MGP_NODShiLtJ_T0072763.1 MGP_NODShiLtJ_G0029651.1 mouse_genomes_project 5 123458504 123473978 - MGP_NODShiLtJ_P0072763 Tmed5 protein_coding protein_coding MGP_NODShiLtJ_T0072764.1 MGP_NODShiLtJ_G0029651.1 mouse_genomes_project 5 123463149 123474015 - MGP_NODShiLtJ_P0072764 Tmed5 protein_coding protein_coding MGP_NODShiLtJ_T0072765.1 MGP_NODShiLtJ_G0029651.1 mouse_genomes_project 5 123464575 123473944 - MGP_NODShiLtJ_P0072765 Tmed5 protein_coding protein_coding MGP_NODShiLtJ_T0072766.1 MGP_NODShiLtJ_G0029651.1 mouse_genomes_project 5 123470863 123473928 - MGP_NODShiLtJ_P0072766 Tmed5 protein_coding protein_coding MGP_NODShiLtJ_T0072767.1 MGP_NODShiLtJ_G0029651.1 mouse_genomes_project 5 123471118 123473925 - MGP_NODShiLtJ_P0072767 Tmed5 protein_coding protein_coding MGP_NODShiLtJ_T0099373.1 MGP_NODShiLtJ_G0037767.1 mouse_genomes_project 5 105475189 105475308 + Gm23031 snRNA snRNA MGP_NODShiLtJ_T0004597.1 MGP_NODShiLtJ_G0003979.1 mouse_genomes_project 5 32016327 32020908 - Gm15461 antisense antisense MGP_NODShiLtJ_T0015014.1 MGP_NODShiLtJ_G0013122.1 mouse_genomes_project 5 130414509 130415574 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071315.1 MGP_NODShiLtJ_G0029346.1 mouse_genomes_project 5 55989689 56031118 - MGP_NODShiLtJ_P0071315 Dhx15 protein_coding protein_coding MGP_NODShiLtJ_T0071316.1 MGP_NODShiLtJ_G0029346.1 mouse_genomes_project 5 55990179 56030981 - MGP_NODShiLtJ_P0071316 Dhx15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071317.1 MGP_NODShiLtJ_G0029346.1 mouse_genomes_project 5 55992810 55997289 - Dhx15 protein_coding retained_intron MGP_NODShiLtJ_T0071318.1 MGP_NODShiLtJ_G0029346.1 mouse_genomes_project 5 55993212 56031093 - MGP_NODShiLtJ_P0071318 Dhx15 protein_coding protein_coding MGP_NODShiLtJ_T0071319.1 MGP_NODShiLtJ_G0029346.1 mouse_genomes_project 5 55998150 56001119 - Dhx15 protein_coding retained_intron MGP_NODShiLtJ_T0071320.1 MGP_NODShiLtJ_G0029346.1 mouse_genomes_project 5 56006854 56031098 - MGP_NODShiLtJ_P0071320 Dhx15 protein_coding protein_coding MGP_NODShiLtJ_T0071321.1 MGP_NODShiLtJ_G0029346.1 mouse_genomes_project 5 56025426 56028026 - Dhx15 protein_coding retained_intron MGP_NODShiLtJ_T0014760.1 MGP_NODShiLtJ_G0012868.1 mouse_genomes_project 5 21566018 21566392 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099399.1 MGP_NODShiLtJ_G0037793.1 mouse_genomes_project 5 144265657 144265764 - Gm24839 snRNA snRNA MGP_NODShiLtJ_T0008202.1 MGP_NODShiLtJ_G0006672.1 mouse_genomes_project 5 126347408 126349650 + Gm26711 lincRNA lincRNA MGP_NODShiLtJ_T0008277.1 MGP_NODShiLtJ_G0006720.1 mouse_genomes_project 5 137303584 137310023 - Gm42654 lincRNA lincRNA MGP_NODShiLtJ_T0008278.1 MGP_NODShiLtJ_G0006720.1 mouse_genomes_project 5 137303592 137306614 - Gm42654 lincRNA lincRNA MGP_NODShiLtJ_T0072995.1 MGP_NODShiLtJ_G0029701.1 mouse_genomes_project 5 127789706 127790357 + MGP_NODShiLtJ_P0072995 Gm26897 protein_coding protein_coding MGP_NODShiLtJ_T0071242.1 MGP_NODShiLtJ_G0029336.1 mouse_genomes_project 5 48301409 48320740 + MGP_NODShiLtJ_P0071242 Lap3 protein_coding protein_coding MGP_NODShiLtJ_T0071243.1 MGP_NODShiLtJ_G0029336.1 mouse_genomes_project 5 48301539 48308783 + Lap3 protein_coding retained_intron MGP_NODShiLtJ_T0071244.1 MGP_NODShiLtJ_G0029336.1 mouse_genomes_project 5 48301561 48311421 + MGP_NODShiLtJ_P0071244 Lap3 protein_coding protein_coding MGP_NODShiLtJ_T0071245.1 MGP_NODShiLtJ_G0029336.1 mouse_genomes_project 5 48306266 48312870 + Lap3 protein_coding retained_intron MGP_NODShiLtJ_T0071246.1 MGP_NODShiLtJ_G0029336.1 mouse_genomes_project 5 48308376 48312841 + Lap3 protein_coding retained_intron MGP_NODShiLtJ_T0071247.1 MGP_NODShiLtJ_G0029336.1 mouse_genomes_project 5 48317257 48319422 + Lap3 protein_coding retained_intron MGP_NODShiLtJ_T0069928.1 MGP_NODShiLtJ_G0029111.1 mouse_genomes_project 5 21178672 21304762 - MGP_NODShiLtJ_P0069928 Phtf2 protein_coding protein_coding MGP_NODShiLtJ_T0069929.1 MGP_NODShiLtJ_G0029111.1 mouse_genomes_project 5 21179682 21194780 - MGP_NODShiLtJ_P0069929 Phtf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069930.1 MGP_NODShiLtJ_G0029111.1 mouse_genomes_project 5 21203807 21276220 - Phtf2 protein_coding processed_transcript MGP_NODShiLtJ_T0069931.1 MGP_NODShiLtJ_G0029111.1 mouse_genomes_project 5 21203810 21227938 - MGP_NODShiLtJ_P0069931 Phtf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069932.1 MGP_NODShiLtJ_G0029111.1 mouse_genomes_project 5 21210951 21304715 - Phtf2 protein_coding retained_intron MGP_NODShiLtJ_T0069933.1 MGP_NODShiLtJ_G0029111.1 mouse_genomes_project 5 21215516 21304716 - Phtf2 protein_coding retained_intron MGP_NODShiLtJ_T0069934.1 MGP_NODShiLtJ_G0029111.1 mouse_genomes_project 5 21227914 21304683 - MGP_NODShiLtJ_P0069934 Phtf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071805.1 MGP_NODShiLtJ_G0029431.1 mouse_genomes_project 5 82484487 82513812 + MGP_NODShiLtJ_P0071805 Spata18 protein_coding protein_coding MGP_NODShiLtJ_T0071806.1 MGP_NODShiLtJ_G0029431.1 mouse_genomes_project 5 82484490 82509723 + MGP_NODShiLtJ_P0071806 Spata18 protein_coding non_stop_decay MGP_NODShiLtJ_T0071807.1 MGP_NODShiLtJ_G0029431.1 mouse_genomes_project 5 82491847 82513782 + MGP_NODShiLtJ_P0071807 Spata18 protein_coding protein_coding MGP_NODShiLtJ_T0071808.1 MGP_NODShiLtJ_G0029431.1 mouse_genomes_project 5 82493581 82513784 + MGP_NODShiLtJ_P0071808 Spata18 protein_coding protein_coding MGP_NODShiLtJ_T0004637.1 MGP_NODShiLtJ_G0004010.1 mouse_genomes_project 5 56288613 56291567 + Gm43683 antisense antisense MGP_NODShiLtJ_T0014767.1 MGP_NODShiLtJ_G0012875.1 mouse_genomes_project 5 22234651 22234934 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014802.1 MGP_NODShiLtJ_G0012910.1 mouse_genomes_project 5 28868262 28872042 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070397.1 MGP_NODShiLtJ_G0029202.1 mouse_genomes_project 5 32116553 32124440 + MGP_NODShiLtJ_P0070397 Emilin1 protein_coding protein_coding MGP_NODShiLtJ_T0070398.1 MGP_NODShiLtJ_G0029202.1 mouse_genomes_project 5 32116890 32124029 + Emilin1 protein_coding retained_intron MGP_NODShiLtJ_T0070399.1 MGP_NODShiLtJ_G0029202.1 mouse_genomes_project 5 32123084 32124213 + Emilin1 protein_coding retained_intron MGP_NODShiLtJ_T0007972.1 MGP_NODShiLtJ_G0006504.1 mouse_genomes_project 5 5193882 5507589 - lincRNA lincRNA MGP_NODShiLtJ_T0015080.1 MGP_NODShiLtJ_G0013188.1 mouse_genomes_project 5 165103431 165104017 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075423.1 MGP_NODShiLtJ_G0030153.1 mouse_genomes_project 5 164136344 164147790 + MGP_NODShiLtJ_P0075423 Nptx2 protein_coding protein_coding MGP_NODShiLtJ_T0001718.1 MGP_NODShiLtJ_G0001632.1 mouse_genomes_project 5 127216829 127217369 + TEC TEC MGP_NODShiLtJ_T0001701.1 MGP_NODShiLtJ_G0001615.1 mouse_genomes_project 5 118825525 118827786 - TEC TEC MGP_NODShiLtJ_T0074833.1 MGP_NODShiLtJ_G0030031.1 mouse_genomes_project 5 156228299 156245678 + MGP_NODShiLtJ_P0074833 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0074834.1 MGP_NODShiLtJ_G0030031.1 mouse_genomes_project 5 156236293 156238122 + MGP_NODShiLtJ_P0074834 protein_coding protein_coding MGP_NODShiLtJ_T0004793.1 MGP_NODShiLtJ_G0004123.1 mouse_genomes_project 5 152886083 152893723 + Gm42884 antisense antisense MGP_NODShiLtJ_T0004794.1 MGP_NODShiLtJ_G0004123.1 mouse_genomes_project 5 152890901 152893923 + Gm42884 antisense antisense MGP_NODShiLtJ_T0101949.1 MGP_NODShiLtJ_G0040117.1 mouse_genomes_project 5 99142731 99146752 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001450.1 MGP_NODShiLtJ_G0001368.1 mouse_genomes_project 5 29616774 29618460 + TEC TEC MGP_NODShiLtJ_T0007993.1 MGP_NODShiLtJ_G0006516.1 mouse_genomes_project 5 25179448 25180030 + 2310074N15Rik lincRNA lincRNA MGP_NODShiLtJ_T0008405.1 MGP_NODShiLtJ_G0006806.1 mouse_genomes_project 5 171150754 171153234 - Gm43598 lincRNA lincRNA MGP_NODShiLtJ_T0074759.1 MGP_NODShiLtJ_G0030015.1 mouse_genomes_project 5 155607765 155617403 + MGP_NODShiLtJ_P0074759 Plod3 protein_coding protein_coding MGP_NODShiLtJ_T0074760.1 MGP_NODShiLtJ_G0030015.1 mouse_genomes_project 5 155608124 155612844 + Plod3 protein_coding retained_intron MGP_NODShiLtJ_T0074761.1 MGP_NODShiLtJ_G0030015.1 mouse_genomes_project 5 155608222 155613461 + Plod3 protein_coding retained_intron MGP_NODShiLtJ_T0074762.1 MGP_NODShiLtJ_G0030015.1 mouse_genomes_project 5 155611061 155614935 + Plod3 protein_coding retained_intron MGP_NODShiLtJ_T0074763.1 MGP_NODShiLtJ_G0030015.1 mouse_genomes_project 5 155611257 155612844 + Plod3 protein_coding retained_intron MGP_NODShiLtJ_T0074764.1 MGP_NODShiLtJ_G0030015.1 mouse_genomes_project 5 155612379 155615933 + MGP_NODShiLtJ_P0074764 Plod3 protein_coding protein_coding MGP_NODShiLtJ_T0004635.1 MGP_NODShiLtJ_G0004008.1 mouse_genomes_project 5 51270699 51273342 - 4930518C09Rik antisense antisense MGP_NODShiLtJ_T0070535.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493034 32494541 + Krtcap3 protein_coding retained_intron MGP_NODShiLtJ_T0070536.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493049 32494541 + MGP_NODShiLtJ_P0070536 Krtcap3 protein_coding protein_coding MGP_NODShiLtJ_T0070537.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493059 32494235 + Krtcap3 protein_coding retained_intron MGP_NODShiLtJ_T0070538.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493065 32494546 + MGP_NODShiLtJ_P0070538 Krtcap3 protein_coding protein_coding MGP_NODShiLtJ_T0070539.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493068 32494541 + MGP_NODShiLtJ_P0070539 Krtcap3 protein_coding protein_coding MGP_NODShiLtJ_T0070540.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493105 32494042 + Krtcap3 protein_coding retained_intron MGP_NODShiLtJ_T0070541.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493270 32494340 + Krtcap3 protein_coding retained_intron MGP_NODShiLtJ_T0070542.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493679 32494543 + Krtcap3 protein_coding retained_intron MGP_NODShiLtJ_T0070543.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493823 32494541 + Krtcap3 protein_coding retained_intron MGP_NODShiLtJ_T0070544.1 MGP_NODShiLtJ_G0029223.1 mouse_genomes_project 5 32493898 32494541 + Krtcap3 protein_coding retained_intron MGP_NODShiLtJ_T0075010.1 MGP_NODShiLtJ_G0030066.1 mouse_genomes_project 5 157207403 157211312 + MGP_NODShiLtJ_P0075010 Lamtor4 protein_coding protein_coding MGP_NODShiLtJ_T0075011.1 MGP_NODShiLtJ_G0030066.1 mouse_genomes_project 5 157207752 157211315 + Lamtor4 protein_coding processed_transcript MGP_NODShiLtJ_T0073204.1 MGP_NODShiLtJ_G0029743.1 mouse_genomes_project 5 131015951 131036233 - MGP_NODShiLtJ_P0073204 Gltp protein_coding protein_coding MGP_NODShiLtJ_T0073205.1 MGP_NODShiLtJ_G0029743.1 mouse_genomes_project 5 131016636 131036190 - MGP_NODShiLtJ_P0073205 Gltp protein_coding protein_coding MGP_NODShiLtJ_T0073206.1 MGP_NODShiLtJ_G0029743.1 mouse_genomes_project 5 131016781 131036157 - MGP_NODShiLtJ_P0073206 Gltp protein_coding protein_coding MGP_NODShiLtJ_T0001724.1 MGP_NODShiLtJ_G0001638.1 mouse_genomes_project 5 129299015 129299579 + TEC TEC MGP_NODShiLtJ_T0010634.1 MGP_NODShiLtJ_G0008767.1 mouse_genomes_project 5 162643901 162644027 + Gm44405 miRNA miRNA MGP_NODShiLtJ_T0072397.1 MGP_NODShiLtJ_G0029570.1 mouse_genomes_project 5 111468857 111479852 - MGP_NODShiLtJ_P0072397 Naa11 protein_coding protein_coding MGP_NODShiLtJ_T0014729.1 MGP_NODShiLtJ_G0012837.1 mouse_genomes_project 5 4886845 4887967 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014797.1 MGP_NODShiLtJ_G0012905.1 mouse_genomes_project 5 27776507 27776913 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001732.1 MGP_NODShiLtJ_G0001646.1 mouse_genomes_project 5 130421396 130423249 + TEC TEC MGP_NODShiLtJ_T0015089.1 MGP_NODShiLtJ_G0013197.1 mouse_genomes_project 5 166279845 166280717 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011491.1 MGP_NODShiLtJ_G0009624.1 mouse_genomes_project 5 114912327 114912465 + Gm28030 misc_RNA misc_RNA MGP_NODShiLtJ_T0074151.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592023 142619094 - MGP_NODShiLtJ_P0074151 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074152.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592023 142763331 - MGP_NODShiLtJ_P0074152 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074153.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592023 142763331 - MGP_NODShiLtJ_P0074153 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074154.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592025 142763331 - MGP_NODShiLtJ_P0074154 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074155.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592030 142704491 - MGP_NODShiLtJ_P0074155 Ncor2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0074156.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592032 142763224 - MGP_NODShiLtJ_P0074156 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074157.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592705 142703339 - MGP_NODShiLtJ_P0074157 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074158.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592705 142763331 - MGP_NODShiLtJ_P0074158 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074159.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142592762 142601799 - MGP_NODShiLtJ_P0074159 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074160.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142593004 142601338 - MGP_NODShiLtJ_P0074160 Ncor2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074161.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142593102 142599496 - Ncor2 protein_coding retained_intron MGP_NODShiLtJ_T0074162.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142601372 142603192 - MGP_NODShiLtJ_P0074162 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074163.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142601378 142602364 - Ncor2 protein_coding retained_intron MGP_NODShiLtJ_T0074164.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142607083 142635804 - MGP_NODShiLtJ_P0074164 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0074165.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142625189 142633385 - Ncor2 protein_coding retained_intron MGP_NODShiLtJ_T0074166.1 MGP_NODShiLtJ_G0029908.1 mouse_genomes_project 5 142628340 142635815 - MGP_NODShiLtJ_P0074166 Ncor2 protein_coding protein_coding MGP_NODShiLtJ_T0072346.1 MGP_NODShiLtJ_G0029560.1 mouse_genomes_project 5 106437273 106469041 - MGP_NODShiLtJ_P0072346 Ccni protein_coding protein_coding MGP_NODShiLtJ_T0072347.1 MGP_NODShiLtJ_G0029560.1 mouse_genomes_project 5 106440548 106446829 - MGP_NODShiLtJ_P0072347 Ccni protein_coding protein_coding MGP_NODShiLtJ_T0072348.1 MGP_NODShiLtJ_G0029560.1 mouse_genomes_project 5 106444615 106445384 - Ccni protein_coding retained_intron MGP_NODShiLtJ_T0072349.1 MGP_NODShiLtJ_G0029560.1 mouse_genomes_project 5 106444924 106461485 - MGP_NODShiLtJ_P0072349 Ccni protein_coding protein_coding MGP_NODShiLtJ_T0072350.1 MGP_NODShiLtJ_G0029560.1 mouse_genomes_project 5 106446727 106468974 - MGP_NODShiLtJ_P0072350 Ccni protein_coding protein_coding MGP_NODShiLtJ_T0015058.1 MGP_NODShiLtJ_G0013166.1 mouse_genomes_project 5 157326184 157326388 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001864.1 MGP_NODShiLtJ_G0001776.1 mouse_genomes_project 5 169801403 169803041 + TEC TEC MGP_NODShiLtJ_T0071818.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83095743 83443551 - MGP_NODShiLtJ_P0071818 Scfd2 protein_coding protein_coding MGP_NODShiLtJ_T0071819.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83096008 83184000 - Scfd2 protein_coding processed_transcript MGP_NODShiLtJ_T0071820.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83096974 83118644 - Scfd2 protein_coding retained_intron MGP_NODShiLtJ_T0071821.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83096977 83443554 - MGP_NODShiLtJ_P0071821 Scfd2 protein_coding protein_coding MGP_NODShiLtJ_T0071822.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83299348 83301947 - MGP_NODShiLtJ_P0071822 Scfd2 protein_coding protein_coding MGP_NODShiLtJ_T0071823.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83358824 83443531 - MGP_NODShiLtJ_P0071823 Scfd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071824.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83367304 83443561 - MGP_NODShiLtJ_P0071824 Scfd2 protein_coding protein_coding MGP_NODShiLtJ_T0071825.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83369850 83390667 - Scfd2 protein_coding retained_intron MGP_NODShiLtJ_T0071826.1 MGP_NODShiLtJ_G0029434.1 mouse_genomes_project 5 83425882 83443544 - Scfd2 protein_coding processed_transcript MGP_NODShiLtJ_T0071325.1 MGP_NODShiLtJ_G0029349.1 mouse_genomes_project 5 56390634 56423410 - MGP_NODShiLtJ_P0071325 Lgi2 protein_coding protein_coding MGP_NODShiLtJ_T0071326.1 MGP_NODShiLtJ_G0029349.1 mouse_genomes_project 5 56390634 56423570 - MGP_NODShiLtJ_P0071326 Lgi2 protein_coding protein_coding MGP_NODShiLtJ_T0100640.1 MGP_NODShiLtJ_G0039034.1 mouse_genomes_project 5 135051736 135051868 + Gm25076 snoRNA snoRNA MGP_NODShiLtJ_T0008375.1 MGP_NODShiLtJ_G0006786.1 mouse_genomes_project 5 169114947 169119936 + 4930505K14Rik lincRNA lincRNA MGP_NODShiLtJ_T0008067.1 MGP_NODShiLtJ_G0006569.1 mouse_genomes_project 5 57309996 57322950 - Gm42745 lincRNA lincRNA MGP_NODShiLtJ_T0070714.1 MGP_NODShiLtJ_G0029251.1 mouse_genomes_project 5 35237578 35267654 - MGP_NODShiLtJ_P0070714 Fam53a protein_coding protein_coding MGP_NODShiLtJ_T0070715.1 MGP_NODShiLtJ_G0029251.1 mouse_genomes_project 5 35237587 35266931 - MGP_NODShiLtJ_P0070715 Fam53a protein_coding protein_coding MGP_NODShiLtJ_T0070716.1 MGP_NODShiLtJ_G0029251.1 mouse_genomes_project 5 35237587 35267641 - MGP_NODShiLtJ_P0070716 Fam53a protein_coding protein_coding MGP_NODShiLtJ_T0070717.1 MGP_NODShiLtJ_G0029251.1 mouse_genomes_project 5 35237587 35267607 - MGP_NODShiLtJ_P0070717 Fam53a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070718.1 MGP_NODShiLtJ_G0029251.1 mouse_genomes_project 5 35245452 35267602 - MGP_NODShiLtJ_P0070718 Fam53a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070719.1 MGP_NODShiLtJ_G0029251.1 mouse_genomes_project 5 35245625 35267618 - MGP_NODShiLtJ_P0070719 Fam53a protein_coding protein_coding MGP_NODShiLtJ_T0070720.1 MGP_NODShiLtJ_G0029251.1 mouse_genomes_project 5 35247697 35267081 - MGP_NODShiLtJ_P0070720 Fam53a protein_coding protein_coding MGP_NODShiLtJ_T0070721.1 MGP_NODShiLtJ_G0029251.1 mouse_genomes_project 5 35252069 35267624 - Fam53a protein_coding processed_transcript MGP_NODShiLtJ_T0072066.1 MGP_NODShiLtJ_G0029481.1 mouse_genomes_project 5 99403903 99438116 - MGP_NODShiLtJ_P0072066 Ugt2b36 protein_coding protein_coding MGP_NODShiLtJ_T0072067.1 MGP_NODShiLtJ_G0029481.1 mouse_genomes_project 5 99404414 99438109 - MGP_NODShiLtJ_P0072067 Ugt2b36 protein_coding protein_coding MGP_NODShiLtJ_T0072068.1 MGP_NODShiLtJ_G0029481.1 mouse_genomes_project 5 99404417 99436258 - Ugt2b36 protein_coding retained_intron MGP_NODShiLtJ_T0072069.1 MGP_NODShiLtJ_G0029481.1 mouse_genomes_project 5 99423223 99438107 - MGP_NODShiLtJ_P0072069 Ugt2b36 protein_coding protein_coding MGP_NODShiLtJ_T0001822.1 MGP_NODShiLtJ_G0001735.1 mouse_genomes_project 5 150195393 150202873 - TEC TEC MGP_NODShiLtJ_T0071344.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56722086 56757652 + MGP_NODShiLtJ_P0071344 Anapc4 protein_coding protein_coding MGP_NODShiLtJ_T0071345.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56722200 56756597 + MGP_NODShiLtJ_P0071345 Anapc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071346.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56731688 56737596 + Anapc4 protein_coding retained_intron MGP_NODShiLtJ_T0071347.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56731804 56739495 + MGP_NODShiLtJ_P0071347 Anapc4 protein_coding protein_coding MGP_NODShiLtJ_T0071348.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56731817 56739482 + MGP_NODShiLtJ_P0071348 Anapc4 protein_coding protein_coding MGP_NODShiLtJ_T0071349.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56736533 56737671 + Anapc4 protein_coding retained_intron MGP_NODShiLtJ_T0071350.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56739119 56749017 + Anapc4 protein_coding retained_intron MGP_NODShiLtJ_T0071351.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56745257 56746809 + Anapc4 protein_coding retained_intron MGP_NODShiLtJ_T0071352.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56748909 56755851 + Anapc4 protein_coding retained_intron MGP_NODShiLtJ_T0071353.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56750763 56752405 + Anapc4 protein_coding retained_intron MGP_NODShiLtJ_T0071354.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56751005 56754510 + Anapc4 protein_coding retained_intron MGP_NODShiLtJ_T0071355.1 MGP_NODShiLtJ_G0029353.1 mouse_genomes_project 5 56755467 56756589 + Anapc4 protein_coding retained_intron MGP_NODShiLtJ_T0014929.1 MGP_NODShiLtJ_G0013037.1 mouse_genomes_project 5 91123841 91126556 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008222.1 MGP_NODShiLtJ_G0006682.1 mouse_genomes_project 5 128252204 128261151 + Gm42491 lincRNA lincRNA MGP_NODShiLtJ_T0100635.1 MGP_NODShiLtJ_G0039029.1 mouse_genomes_project 5 123212609 123212703 + Snord21 snoRNA snoRNA MGP_NODShiLtJ_T0071023.1 MGP_NODShiLtJ_G0029296.1 mouse_genomes_project 5 38496066 38568554 - MGP_NODShiLtJ_P0071023 D5Ertd579e protein_coding protein_coding MGP_NODShiLtJ_T0071024.1 MGP_NODShiLtJ_G0029296.1 mouse_genomes_project 5 38497833 38509304 - MGP_NODShiLtJ_P0071024 D5Ertd579e protein_coding protein_coding MGP_NODShiLtJ_T0071025.1 MGP_NODShiLtJ_G0029296.1 mouse_genomes_project 5 38511529 38519057 - D5Ertd579e protein_coding processed_transcript MGP_NODShiLtJ_T0071026.1 MGP_NODShiLtJ_G0029296.1 mouse_genomes_project 5 38515666 38568578 - D5Ertd579e protein_coding retained_intron MGP_NODShiLtJ_T0071027.1 MGP_NODShiLtJ_G0029296.1 mouse_genomes_project 5 38524865 38568554 - D5Ertd579e protein_coding retained_intron MGP_NODShiLtJ_T0071028.1 MGP_NODShiLtJ_G0029296.1 mouse_genomes_project 5 38541409 38568641 - MGP_NODShiLtJ_P0071028 D5Ertd579e protein_coding protein_coding MGP_NODShiLtJ_T0071029.1 MGP_NODShiLtJ_G0029296.1 mouse_genomes_project 5 38560526 38568587 - D5Ertd579e protein_coding retained_intron MGP_NODShiLtJ_T0070615.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015062 33050458 + MGP_NODShiLtJ_P0070615 Bre protein_coding protein_coding MGP_NODShiLtJ_T0070616.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015276 33441486 + MGP_NODShiLtJ_P0070616 Bre protein_coding protein_coding MGP_NODShiLtJ_T0070617.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015282 33050878 + Bre protein_coding retained_intron MGP_NODShiLtJ_T0070618.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015308 33026390 + Bre protein_coding processed_transcript MGP_NODShiLtJ_T0070619.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015318 33341040 + Bre protein_coding retained_intron MGP_NODShiLtJ_T0070620.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015326 33162437 + Bre protein_coding retained_intron MGP_NODShiLtJ_T0070621.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015342 33441379 + MGP_NODShiLtJ_P0070621 Bre protein_coding protein_coding MGP_NODShiLtJ_T0070622.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015362 33441271 + MGP_NODShiLtJ_P0070622 Bre protein_coding protein_coding MGP_NODShiLtJ_T0070623.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015362 33441271 + MGP_NODShiLtJ_P0070623 Bre protein_coding protein_coding MGP_NODShiLtJ_T0070624.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015362 33441271 + MGP_NODShiLtJ_P0070624 Bre protein_coding protein_coding MGP_NODShiLtJ_T0070625.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33015363 33149629 + MGP_NODShiLtJ_P0070625 Bre protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070626.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33019159 33412007 + MGP_NODShiLtJ_P0070626 Bre protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070627.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33108902 33149710 + Bre protein_coding processed_transcript MGP_NODShiLtJ_T0070628.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33386378 33441285 + Bre protein_coding processed_transcript MGP_NODShiLtJ_T0070629.1 MGP_NODShiLtJ_G0029234.1 mouse_genomes_project 5 33436228 33441278 + Bre protein_coding processed_transcript MGP_NODShiLtJ_T0072787.1 MGP_NODShiLtJ_G0029659.1 mouse_genomes_project 5 123937360 123970701 - MGP_NODShiLtJ_P0072787 Cplx1 protein_coding protein_coding MGP_NODShiLtJ_T0072788.1 MGP_NODShiLtJ_G0029659.1 mouse_genomes_project 5 123939065 123970677 - MGP_NODShiLtJ_P0072788 Cplx1 protein_coding protein_coding MGP_NODShiLtJ_T0014945.1 MGP_NODShiLtJ_G0013053.1 mouse_genomes_project 5 101173056 101173605 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100617.1 MGP_NODShiLtJ_G0039011.1 mouse_genomes_project 5 71410363 71410497 + Gm22559 snoRNA snoRNA MGP_NODShiLtJ_T0075783.1 MGP_NODShiLtJ_G0030225.1 mouse_genomes_project 5 172179758 172222484 - MGP_NODShiLtJ_P0075783 Vmn2r18 protein_coding protein_coding MGP_NODShiLtJ_T0015083.1 MGP_NODShiLtJ_G0013191.1 mouse_genomes_project 5 165736158 165736481 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070378.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090010 32092524 + MGP_NODShiLtJ_P0070378 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0070379.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090168 32098004 + MGP_NODShiLtJ_P0070379 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0070380.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090251 32110128 + MGP_NODShiLtJ_P0070380 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0070381.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090257 32095150 + Agbl5 protein_coding retained_intron MGP_NODShiLtJ_T0070382.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090272 32109830 + Agbl5 protein_coding retained_intron MGP_NODShiLtJ_T0070383.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090285 32097401 + Agbl5 protein_coding retained_intron MGP_NODShiLtJ_T0070384.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090285 32109829 + MGP_NODShiLtJ_P0070384 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0070385.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090290 32106650 + MGP_NODShiLtJ_P0070385 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0070386.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090317 32109829 + MGP_NODShiLtJ_P0070386 Agbl5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070387.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090322 32109829 + MGP_NODShiLtJ_P0070387 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0070388.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090322 32106650 + MGP_NODShiLtJ_P0070388 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0070389.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32090642 32093186 + MGP_NODShiLtJ_P0070389 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0070390.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32091598 32093764 + Agbl5 protein_coding processed_transcript MGP_NODShiLtJ_T0070391.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32095520 32097411 + Agbl5 protein_coding retained_intron MGP_NODShiLtJ_T0070393.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32096455 32097432 + Agbl5 protein_coding retained_intron MGP_NODShiLtJ_T0070394.1 MGP_NODShiLtJ_G0029200.1 mouse_genomes_project 5 32097249 32109073 + MGP_NODShiLtJ_P0070394 Agbl5 protein_coding protein_coding MGP_NODShiLtJ_T0004636.1 MGP_NODShiLtJ_G0004009.1 mouse_genomes_project 5 51972696 51985059 + Gm20700 antisense antisense MGP_NODShiLtJ_T0075689.1 MGP_NODShiLtJ_G0030212.1 mouse_genomes_project 5 169948326 170047700 + MGP_NODShiLtJ_P0075689 Wdr95 protein_coding protein_coding MGP_NODShiLtJ_T0075690.1 MGP_NODShiLtJ_G0030212.1 mouse_genomes_project 5 169949786 169994824 + Wdr95 protein_coding retained_intron MGP_NODShiLtJ_T0075691.1 MGP_NODShiLtJ_G0030212.1 mouse_genomes_project 5 169949792 170035081 + MGP_NODShiLtJ_P0075691 Wdr95 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075692.1 MGP_NODShiLtJ_G0030212.1 mouse_genomes_project 5 169949834 169995893 + Wdr95 protein_coding retained_intron MGP_NODShiLtJ_T0075693.1 MGP_NODShiLtJ_G0030212.1 mouse_genomes_project 5 169949834 170047700 + MGP_NODShiLtJ_P0075693 Wdr95 protein_coding protein_coding MGP_NODShiLtJ_T0075694.1 MGP_NODShiLtJ_G0030212.1 mouse_genomes_project 5 169959829 169994824 + Wdr95 protein_coding retained_intron MGP_NODShiLtJ_T0075695.1 MGP_NODShiLtJ_G0030212.1 mouse_genomes_project 5 170017112 170023549 + Wdr95 protein_coding retained_intron MGP_NODShiLtJ_T0001593.1 MGP_NODShiLtJ_G0001508.1 mouse_genomes_project 5 72828542 72830017 - TEC TEC MGP_NODShiLtJ_T0075346.1 MGP_NODShiLtJ_G0030136.1 mouse_genomes_project 5 163019791 163045636 - MGP_NODShiLtJ_P0075346 Rac1 protein_coding protein_coding MGP_NODShiLtJ_T0075347.1 MGP_NODShiLtJ_G0030136.1 mouse_genomes_project 5 163024889 163035778 - Rac1 protein_coding processed_transcript MGP_NODShiLtJ_T0075348.1 MGP_NODShiLtJ_G0030136.1 mouse_genomes_project 5 163032249 163035204 - Rac1 protein_coding processed_transcript MGP_NODShiLtJ_T0071754.1 MGP_NODShiLtJ_G0029422.1 mouse_genomes_project 5 81754403 81767701 + MGP_NODShiLtJ_P0071754 Slc10a4 protein_coding protein_coding MGP_NODShiLtJ_T0008237.1 MGP_NODShiLtJ_G0006690.1 mouse_genomes_project 5 129350618 129359756 + Gm43095 lincRNA lincRNA MGP_NODShiLtJ_T0017970.1 MGP_NODShiLtJ_G0015455.1 mouse_genomes_project 5 2235856 2238511 - Gm43623 processed_transcript processed_transcript MGP_NODShiLtJ_T0004816.1 MGP_NODShiLtJ_G0004138.1 mouse_genomes_project 5 158343502 158344390 - 4930520M14Rik antisense antisense MGP_NODShiLtJ_T0001415.1 MGP_NODShiLtJ_G0001334.1 mouse_genomes_project 5 10574297 10577213 - TEC TEC MGP_NODShiLtJ_T0008075.1 MGP_NODShiLtJ_G0006576.1 mouse_genomes_project 5 71657049 71661751 + Gm43838 lincRNA lincRNA MGP_NODShiLtJ_T0074622.1 MGP_NODShiLtJ_G0029992.1 mouse_genomes_project 5 154270495 154282407 + MGP_NODShiLtJ_P0074622 Mdh2 protein_coding protein_coding MGP_NODShiLtJ_T0074623.1 MGP_NODShiLtJ_G0029992.1 mouse_genomes_project 5 154270651 154272257 + Mdh2 protein_coding retained_intron MGP_NODShiLtJ_T0074624.1 MGP_NODShiLtJ_G0029992.1 mouse_genomes_project 5 154270677 154282414 + MGP_NODShiLtJ_P0074624 Mdh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074625.1 MGP_NODShiLtJ_G0029992.1 mouse_genomes_project 5 154270692 154276630 + Mdh2 protein_coding retained_intron MGP_NODShiLtJ_T0074626.1 MGP_NODShiLtJ_G0029992.1 mouse_genomes_project 5 154270700 154279667 + MGP_NODShiLtJ_P0074626 Mdh2 protein_coding protein_coding MGP_NODShiLtJ_T0074627.1 MGP_NODShiLtJ_G0029992.1 mouse_genomes_project 5 154270704 154278362 + MGP_NODShiLtJ_P0074627 Mdh2 protein_coding protein_coding MGP_NODShiLtJ_T0074628.1 MGP_NODShiLtJ_G0029992.1 mouse_genomes_project 5 154270737 154275768 + Mdh2 protein_coding retained_intron MGP_NODShiLtJ_T0074213.1 MGP_NODShiLtJ_G0029919.1 mouse_genomes_project 5 145596844 146288836 - MGP_NODShiLtJ_P0074213 Tmem132d protein_coding protein_coding MGP_NODShiLtJ_T0074214.1 MGP_NODShiLtJ_G0029919.1 mouse_genomes_project 5 146109059 146116134 - Tmem132d protein_coding processed_transcript MGP_NODShiLtJ_T0074215.1 MGP_NODShiLtJ_G0029919.1 mouse_genomes_project 5 146109164 146116072 - Tmem132d protein_coding processed_transcript MGP_NODShiLtJ_T0007975.1 MGP_NODShiLtJ_G0006507.1 mouse_genomes_project 5 8235040 8366633 + lincRNA lincRNA MGP_NODShiLtJ_T0007976.1 MGP_NODShiLtJ_G0006507.1 mouse_genomes_project 5 8235090 8356102 + lincRNA lincRNA MGP_NODShiLtJ_T0074823.1 MGP_NODShiLtJ_G0030028.1 mouse_genomes_project 5 156065291 156188423 - MGP_NODShiLtJ_P0074823 Zan protein_coding protein_coding MGP_NODShiLtJ_T0074824.1 MGP_NODShiLtJ_G0030028.1 mouse_genomes_project 5 156065291 156187954 - MGP_NODShiLtJ_P0074824 Zan protein_coding protein_coding MGP_NODShiLtJ_T0074825.1 MGP_NODShiLtJ_G0030028.1 mouse_genomes_project 5 156089895 156093198 - Zan protein_coding retained_intron MGP_NODShiLtJ_T0074826.1 MGP_NODShiLtJ_G0030028.1 mouse_genomes_project 5 156102395 156104378 - MGP_NODShiLtJ_P0074826 Zan protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074827.1 MGP_NODShiLtJ_G0030028.1 mouse_genomes_project 5 156132482 156150481 - Zan protein_coding retained_intron MGP_NODShiLtJ_T0070691.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34849589 34888099 - MGP_NODShiLtJ_P0070691 Ctbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070692.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34852510 34888133 - MGP_NODShiLtJ_P0070692 Ctbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070693.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34852541 34888131 - MGP_NODShiLtJ_P0070693 Ctbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070694.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34852812 34888120 - MGP_NODShiLtJ_P0070694 Ctbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070695.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34852955 34854038 - Ctbp1 protein_coding retained_intron MGP_NODShiLtJ_T0070696.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34853048 34854341 - Ctbp1 protein_coding retained_intron MGP_NODShiLtJ_T0070697.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34855170 34874251 - MGP_NODShiLtJ_P0070697 Ctbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070698.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34855645 34888118 - MGP_NODShiLtJ_P0070698 Ctbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070699.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34864089 34874399 - MGP_NODShiLtJ_P0070699 Ctbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070700.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34865431 34874287 - Ctbp1 protein_coding retained_intron MGP_NODShiLtJ_T0070701.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34865847 34879352 - MGP_NODShiLtJ_P0070701 Ctbp1 protein_coding protein_coding MGP_NODShiLtJ_T0070702.1 MGP_NODShiLtJ_G0029247.1 mouse_genomes_project 5 34871714 34879363 - MGP_NODShiLtJ_P0070702 Ctbp1 protein_coding protein_coding MGP_NODShiLtJ_T0008118.1 MGP_NODShiLtJ_G0006610.1 mouse_genomes_project 5 92738422 92740725 - 1700031L13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008119.1 MGP_NODShiLtJ_G0006610.1 mouse_genomes_project 5 92738441 92740728 - 1700031L13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008120.1 MGP_NODShiLtJ_G0006610.1 mouse_genomes_project 5 92738451 92739360 - 1700031L13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008121.1 MGP_NODShiLtJ_G0006610.1 mouse_genomes_project 5 92738700 92739352 - 1700031L13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008402.1 MGP_NODShiLtJ_G0006804.1 mouse_genomes_project 5 171028902 171031280 - Gm5 lincRNA lincRNA MGP_NODShiLtJ_T0008403.1 MGP_NODShiLtJ_G0006804.1 mouse_genomes_project 5 171028970 171031451 - Gm5 lincRNA lincRNA MGP_NODShiLtJ_T0004728.1 MGP_NODShiLtJ_G0004078.1 mouse_genomes_project 5 131372503 131405319 + Hnf1aos1 antisense antisense MGP_NODShiLtJ_T0004730.1 MGP_NODShiLtJ_G0004078.1 mouse_genomes_project 5 131373616 131391133 + Hnf1aos1 antisense antisense MGP_NODShiLtJ_T0004731.1 MGP_NODShiLtJ_G0004078.1 mouse_genomes_project 5 131373639 131405512 + Hnf1aos1 antisense antisense MGP_NODShiLtJ_T0099367.1 MGP_NODShiLtJ_G0037761.1 mouse_genomes_project 5 93661611 93661708 + Gm24129 snRNA snRNA MGP_NODShiLtJ_T0004590.1 MGP_NODShiLtJ_G0003974.1 mouse_genomes_project 5 25645213 25647544 + Prkag2os2 antisense antisense MGP_NODShiLtJ_T0008132.1 MGP_NODShiLtJ_G0006621.1 mouse_genomes_project 5 104858629 104861278 - lincRNA lincRNA MGP_NODShiLtJ_T0070584.1 MGP_NODShiLtJ_G0029230.1 mouse_genomes_project 5 32822041 32834246 - MGP_NODShiLtJ_P0070584 Supt7l protein_coding protein_coding MGP_NODShiLtJ_T0070585.1 MGP_NODShiLtJ_G0029230.1 mouse_genomes_project 5 32823973 32834206 - MGP_NODShiLtJ_P0070585 Supt7l protein_coding protein_coding MGP_NODShiLtJ_T0070586.1 MGP_NODShiLtJ_G0029230.1 mouse_genomes_project 5 32829023 32835282 - Supt7l protein_coding retained_intron MGP_NODShiLtJ_T0070587.1 MGP_NODShiLtJ_G0029230.1 mouse_genomes_project 5 32832931 32834177 - Supt7l protein_coding retained_intron MGP_NODShiLtJ_T0070942.1 MGP_NODShiLtJ_G0029283.1 mouse_genomes_project 5 37346963 37370061 - MGP_NODShiLtJ_P0070942 Cpz protein_coding protein_coding MGP_NODShiLtJ_T0070943.1 MGP_NODShiLtJ_G0029283.1 mouse_genomes_project 5 37362228 37369936 - MGP_NODShiLtJ_P0070943 Cpz protein_coding protein_coding MGP_NODShiLtJ_T0015055.1 MGP_NODShiLtJ_G0013163.1 mouse_genomes_project 5 156690842 156691077 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014819.1 MGP_NODShiLtJ_G0012927.1 mouse_genomes_project 5 34368743 34369866 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004603.1 MGP_NODShiLtJ_G0003984.1 mouse_genomes_project 5 33890090 33975276 - antisense antisense MGP_NODShiLtJ_T0001457.1 MGP_NODShiLtJ_G0001374.1 mouse_genomes_project 5 32447421 32451393 - TEC TEC MGP_NODShiLtJ_T0001494.1 MGP_NODShiLtJ_G0001410.1 mouse_genomes_project 5 46438959 46441031 - TEC TEC MGP_NODShiLtJ_T0001831.1 MGP_NODShiLtJ_G0001744.1 mouse_genomes_project 5 151010669 151010957 + TEC TEC MGP_NODShiLtJ_T0072210.1 MGP_NODShiLtJ_G0029530.1 mouse_genomes_project 5 103805181 103808630 + Cxcl3 protein_coding retained_intron MGP_NODShiLtJ_T0072211.1 MGP_NODShiLtJ_G0029530.1 mouse_genomes_project 5 103805181 103807123 + MGP_NODShiLtJ_P0072211 Cxcl3 protein_coding protein_coding MGP_NODShiLtJ_T0004805.1 MGP_NODShiLtJ_G0004132.1 mouse_genomes_project 5 154829752 154976992 + Gm16599 antisense antisense MGP_NODShiLtJ_T0004738.1 MGP_NODShiLtJ_G0004085.1 mouse_genomes_project 5 133053318 133081479 + Srrm4os antisense antisense MGP_NODShiLtJ_T0004739.1 MGP_NODShiLtJ_G0004085.1 mouse_genomes_project 5 133053318 133085931 + Srrm4os antisense antisense MGP_NODShiLtJ_T0075426.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164376020 164376965 + Trrap protein_coding processed_transcript MGP_NODShiLtJ_T0075427.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164376365 164396735 + Trrap protein_coding retained_intron MGP_NODShiLtJ_T0075428.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164376386 164469745 + MGP_NODShiLtJ_P0075428 Trrap protein_coding unknown_likely_coding MGP_NODShiLtJ_T0075429.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164376817 164386082 + MGP_NODShiLtJ_P0075429 Trrap protein_coding protein_coding MGP_NODShiLtJ_T0075430.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164377067 164469738 + MGP_NODShiLtJ_P0075430 Trrap protein_coding protein_coding MGP_NODShiLtJ_T0075431.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164379354 164469736 + MGP_NODShiLtJ_P0075431 Trrap protein_coding protein_coding MGP_NODShiLtJ_T0075432.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164379354 164469711 + MGP_NODShiLtJ_P0075432 Trrap protein_coding protein_coding MGP_NODShiLtJ_T0075433.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164394394 164469736 + MGP_NODShiLtJ_P0075433 Trrap protein_coding protein_coding MGP_NODShiLtJ_T0075434.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164400861 164403052 + Trrap protein_coding retained_intron MGP_NODShiLtJ_T0075435.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164414102 164443816 + Trrap protein_coding retained_intron MGP_NODShiLtJ_T0075436.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164421387 164423137 + Trrap protein_coding retained_intron MGP_NODShiLtJ_T0075437.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164429137 164432425 + Trrap protein_coding retained_intron MGP_NODShiLtJ_T0075438.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164448300 164449760 + Trrap protein_coding retained_intron MGP_NODShiLtJ_T0075439.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164465596 164469737 + Trrap protein_coding retained_intron MGP_NODShiLtJ_T0075440.1 MGP_NODShiLtJ_G0030155.1 mouse_genomes_project 5 164467249 164469303 + Trrap protein_coding processed_transcript MGP_NODShiLtJ_T0075082.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326176 158379978 + MGP_NODShiLtJ_P0075082 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075083.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326182 158379933 + MGP_NODShiLtJ_P0075083 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075084.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326199 158379933 + MGP_NODShiLtJ_P0075084 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075085.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326206 158354454 + Sun1 protein_coding retained_intron MGP_NODShiLtJ_T0075086.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326206 158354455 + MGP_NODShiLtJ_P0075086 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075087.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326208 158349854 + MGP_NODShiLtJ_P0075087 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075088.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326210 158352713 + MGP_NODShiLtJ_P0075088 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075089.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326214 158343809 + Sun1 protein_coding retained_intron MGP_NODShiLtJ_T0075090.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326219 158378687 + MGP_NODShiLtJ_P0075090 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075091.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158326224 158352719 + MGP_NODShiLtJ_P0075091 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075092.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158339974 158340322 + Sun1 protein_coding processed_transcript MGP_NODShiLtJ_T0075093.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158340006 158351512 + MGP_NODShiLtJ_P0075093 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075094.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158340060 158378781 + MGP_NODShiLtJ_P0075094 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075095.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158340300 158351476 + MGP_NODShiLtJ_P0075095 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075096.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158349792 158356947 + Sun1 protein_coding processed_transcript MGP_NODShiLtJ_T0075097.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158351390 158356054 + MGP_NODShiLtJ_P0075097 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075098.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158352857 158361740 + MGP_NODShiLtJ_P0075098 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075099.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158357218 158360658 + Sun1 protein_coding retained_intron MGP_NODShiLtJ_T0075100.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158361691 158375505 + MGP_NODShiLtJ_P0075100 Sun1 protein_coding protein_coding MGP_NODShiLtJ_T0075101.1 MGP_NODShiLtJ_G0030080.1 mouse_genomes_project 5 158369740 158378644 + MGP_NODShiLtJ_P0075101 Sun1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001444.1 MGP_NODShiLtJ_G0001362.1 mouse_genomes_project 5 26155463 26159483 + TEC TEC MGP_NODShiLtJ_T0014803.1 MGP_NODShiLtJ_G0012911.1 mouse_genomes_project 5 28872052 28872741 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075143.1 MGP_NODShiLtJ_G0030090.1 mouse_genomes_project 5 158693181 158697824 + MGP_NODShiLtJ_P0075143 Uncx protein_coding protein_coding MGP_NODShiLtJ_T0075144.1 MGP_NODShiLtJ_G0030090.1 mouse_genomes_project 5 158693585 158694956 + MGP_NODShiLtJ_P0075144 Uncx protein_coding protein_coding MGP_NODShiLtJ_T0001451.1 MGP_NODShiLtJ_G0001369.1 mouse_genomes_project 5 30361071 30365367 - TEC TEC MGP_NODShiLtJ_T0073038.1 MGP_NODShiLtJ_G0029711.1 mouse_genomes_project 5 128592747 128595077 + MGP_NODShiLtJ_P0073038 Gm6588 protein_coding protein_coding MGP_NODShiLtJ_T0004655.1 MGP_NODShiLtJ_G0004026.1 mouse_genomes_project 5 75569353 75578791 - 4930425K10Rik antisense antisense MGP_NODShiLtJ_T0001772.1 MGP_NODShiLtJ_G0001686.1 mouse_genomes_project 5 140152516 140159086 + TEC TEC MGP_NODShiLtJ_T0001470.1 MGP_NODShiLtJ_G0001386.1 mouse_genomes_project 5 35294068 35295223 + TEC TEC MGP_NODShiLtJ_T0014845.1 MGP_NODShiLtJ_G0012953.1 mouse_genomes_project 5 46594869 46597353 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001708.1 MGP_NODShiLtJ_G0001622.1 mouse_genomes_project 5 122405856 122407935 - TEC TEC MGP_NODShiLtJ_T0008171.1 MGP_NODShiLtJ_G0006651.1 mouse_genomes_project 5 118039174 118041567 - 5430427N15Rik lincRNA lincRNA MGP_NODShiLtJ_T0008052.1 MGP_NODShiLtJ_G0006555.1 mouse_genomes_project 5 46464706 46465745 - Gm42555 lincRNA lincRNA MGP_NODShiLtJ_T0099354.1 MGP_NODShiLtJ_G0037748.1 mouse_genomes_project 5 73096120 73096194 + Gm24399 snRNA snRNA MGP_NODShiLtJ_T0001673.1 MGP_NODShiLtJ_G0001587.1 mouse_genomes_project 5 104894697 104895519 - TEC TEC MGP_NODShiLtJ_T0001447.1 MGP_NODShiLtJ_G0001365.1 mouse_genomes_project 5 28183700 28186296 + TEC TEC MGP_NODShiLtJ_T0015052.1 MGP_NODShiLtJ_G0013160.1 mouse_genomes_project 5 156327431 156327941 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075588.1 MGP_NODShiLtJ_G0030196.1 mouse_genomes_project 5 167448401 167455810 - MGP_NODShiLtJ_P0075588 Urad protein_coding protein_coding MGP_NODShiLtJ_T0014934.1 MGP_NODShiLtJ_G0013042.1 mouse_genomes_project 5 98117820 98118031 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098400.1 MGP_NODShiLtJ_G0036805.1 mouse_genomes_project 5 47439692 47445497 - Gm3364 sense_intronic sense_intronic MGP_NODShiLtJ_T0070180.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25634733 25887895 - MGP_NODShiLtJ_P0070180 Prkag2 protein_coding protein_coding MGP_NODShiLtJ_T0070181.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25634737 25681591 - MGP_NODShiLtJ_P0070181 Prkag2 protein_coding protein_coding MGP_NODShiLtJ_T0070182.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25634737 25780909 - MGP_NODShiLtJ_P0070182 Prkag2 protein_coding protein_coding MGP_NODShiLtJ_T0070183.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25635762 25643422 - Prkag2 protein_coding retained_intron MGP_NODShiLtJ_T0070184.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25640856 25681631 - MGP_NODShiLtJ_P0070184 Prkag2 protein_coding protein_coding MGP_NODShiLtJ_T0070185.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25643205 25675814 - MGP_NODShiLtJ_P0070185 Prkag2 protein_coding protein_coding MGP_NODShiLtJ_T0070186.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25646483 25662401 - Prkag2 protein_coding retained_intron MGP_NODShiLtJ_T0070187.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25647009 25681574 - Prkag2 protein_coding retained_intron MGP_NODShiLtJ_T0070188.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25662409 25682097 - MGP_NODShiLtJ_P0070188 Prkag2 protein_coding protein_coding MGP_NODShiLtJ_T0070189.1 MGP_NODShiLtJ_G0029159.1 mouse_genomes_project 5 25679350 25681572 - Prkag2 protein_coding processed_transcript MGP_NODShiLtJ_T0071323.1 MGP_NODShiLtJ_G0029348.1 mouse_genomes_project 5 56220268 56326222 - MGP_NODShiLtJ_P0071323 Ccdc149 protein_coding protein_coding MGP_NODShiLtJ_T0071324.1 MGP_NODShiLtJ_G0029348.1 mouse_genomes_project 5 56220274 56326345 - MGP_NODShiLtJ_P0071324 Ccdc149 protein_coding protein_coding MGP_NODShiLtJ_T0004671.1 MGP_NODShiLtJ_G0004040.1 mouse_genomes_project 5 100551108 100669402 - antisense antisense MGP_NODShiLtJ_T0075579.1 MGP_NODShiLtJ_G0030192.1 mouse_genomes_project 5 167186097 167188135 + MGP_NODShiLtJ_P0075579 Polr1d protein_coding protein_coding MGP_NODShiLtJ_T0075580.1 MGP_NODShiLtJ_G0030192.1 mouse_genomes_project 5 167186393 167220242 + MGP_NODShiLtJ_P0075580 Polr1d protein_coding protein_coding MGP_NODShiLtJ_T0075581.1 MGP_NODShiLtJ_G0030192.1 mouse_genomes_project 5 167186595 167220478 + MGP_NODShiLtJ_P0075581 Polr1d protein_coding protein_coding MGP_NODShiLtJ_T0075582.1 MGP_NODShiLtJ_G0030192.1 mouse_genomes_project 5 167186611 167220455 + MGP_NODShiLtJ_P0075582 Polr1d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075583.1 MGP_NODShiLtJ_G0030192.1 mouse_genomes_project 5 167210021 167219752 + Polr1d protein_coding retained_intron MGP_NODShiLtJ_T0075584.1 MGP_NODShiLtJ_G0030192.1 mouse_genomes_project 5 167214246 167219868 + Polr1d protein_coding processed_transcript MGP_NODShiLtJ_T0098396.1 MGP_NODShiLtJ_G0036801.1 mouse_genomes_project 5 31524251 31524696 + Gm43755 sense_intronic sense_intronic MGP_NODShiLtJ_T0097817.1 MGP_NODShiLtJ_G0036229.1 mouse_genomes_project 5 154393740 154396007 + pseudogene pseudogene MGP_NODShiLtJ_T0004715.1 MGP_NODShiLtJ_G0004068.1 mouse_genomes_project 5 126414272 126416230 + Gm42596 antisense antisense MGP_NODShiLtJ_T0099403.1 MGP_NODShiLtJ_G0037797.1 mouse_genomes_project 5 157142838 157142918 + Gm22956 snRNA snRNA MGP_NODShiLtJ_T0001671.1 MGP_NODShiLtJ_G0001585.1 mouse_genomes_project 5 103389803 103392446 + TEC TEC MGP_NODShiLtJ_T0001420.1 MGP_NODShiLtJ_G0001339.1 mouse_genomes_project 5 12660833 12664463 + TEC TEC MGP_NODShiLtJ_T0001760.1 MGP_NODShiLtJ_G0001674.1 mouse_genomes_project 5 138603160 138605017 + TEC TEC MGP_NODShiLtJ_T0098397.1 MGP_NODShiLtJ_G0036802.1 mouse_genomes_project 5 32014037 32016773 + Gm19409 sense_intronic sense_intronic MGP_NODShiLtJ_T0014806.1 MGP_NODShiLtJ_G0012914.1 mouse_genomes_project 5 30827328 30827620 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073238.1 MGP_NODShiLtJ_G0029747.1 mouse_genomes_project 5 131156863 131162644 - MGP_NODShiLtJ_P0073238 1500011B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0099335.1 MGP_NODShiLtJ_G0037729.1 mouse_genomes_project 5 20413945 20414049 + Gm23570 snRNA snRNA MGP_NODShiLtJ_T0074503.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153307712 153318100 + MGP_NODShiLtJ_P0074503 Wbscr27 protein_coding protein_coding MGP_NODShiLtJ_T0074504.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153307717 153317186 + MGP_NODShiLtJ_P0074504 Wbscr27 protein_coding protein_coding MGP_NODShiLtJ_T0074505.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153307717 153317186 + MGP_NODShiLtJ_P0074505 Wbscr27 protein_coding protein_coding MGP_NODShiLtJ_T0074506.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153307729 153317186 + MGP_NODShiLtJ_P0074506 Wbscr27 protein_coding protein_coding MGP_NODShiLtJ_T0074507.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153307736 153316665 + MGP_NODShiLtJ_P0074507 Wbscr27 protein_coding protein_coding MGP_NODShiLtJ_T0074508.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153307750 153309769 + MGP_NODShiLtJ_P0074508 Wbscr27 protein_coding protein_coding MGP_NODShiLtJ_T0074509.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153307868 153316097 + MGP_NODShiLtJ_P0074509 Wbscr27 protein_coding protein_coding MGP_NODShiLtJ_T0074510.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153308128 153312619 + Wbscr27 protein_coding processed_transcript MGP_NODShiLtJ_T0074511.1 MGP_NODShiLtJ_G0029968.1 mouse_genomes_project 5 153315924 153316695 + MGP_NODShiLtJ_P0074511 Wbscr27 protein_coding protein_coding MGP_NODShiLtJ_T0098050.1 MGP_NODShiLtJ_G0036462.1 mouse_genomes_project 5 105271081 105271188 - Gm24931 rRNA rRNA MGP_NODShiLtJ_T0073651.1 MGP_NODShiLtJ_G0029834.1 mouse_genomes_project 5 138812815 138847709 - MGP_NODShiLtJ_P0073651 protein_coding protein_coding MGP_NODShiLtJ_T0073652.1 MGP_NODShiLtJ_G0029834.1 mouse_genomes_project 5 138812945 138814020 - protein_coding processed_transcript MGP_NODShiLtJ_T0073653.1 MGP_NODShiLtJ_G0029834.1 mouse_genomes_project 5 138823689 138847709 - MGP_NODShiLtJ_P0073653 protein_coding protein_coding MGP_NODShiLtJ_T0073654.1 MGP_NODShiLtJ_G0029834.1 mouse_genomes_project 5 138826664 138888314 - MGP_NODShiLtJ_P0073654 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001446.1 MGP_NODShiLtJ_G0001364.1 mouse_genomes_project 5 28161203 28164426 + TEC TEC MGP_NODShiLtJ_T0072281.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105514239 105581190 + MGP_NODShiLtJ_P0072281 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072282.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105514242 105581387 + MGP_NODShiLtJ_P0072282 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072283.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105514253 105530166 + Art3 protein_coding processed_transcript MGP_NODShiLtJ_T0072284.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105514253 105603311 + MGP_NODShiLtJ_P0072284 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072285.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105514253 105603308 + MGP_NODShiLtJ_P0072285 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072290.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105564198 105581302 + MGP_NODShiLtJ_P0072290 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072291.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105575142 105581273 + MGP_NODShiLtJ_P0072291 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072292.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576018 105580981 + MGP_NODShiLtJ_P0072292 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072293.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576101 105580851 + MGP_NODShiLtJ_P0072293 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072294.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576106 105581232 + MGP_NODShiLtJ_P0072294 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072295.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576398 105603305 + Art3 protein_coding processed_transcript MGP_NODShiLtJ_T0072296.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576398 105603305 + MGP_NODShiLtJ_P0072296 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072297.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576398 105603306 + MGP_NODShiLtJ_P0072297 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072298.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576398 105603305 + MGP_NODShiLtJ_P0072298 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072299.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576398 105603305 + MGP_NODShiLtJ_P0072299 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072300.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105576398 105603305 + MGP_NODShiLtJ_P0072300 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072301.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105580840 105603305 + MGP_NODShiLtJ_P0072301 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072302.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105581314 105603306 + MGP_NODShiLtJ_P0072302 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0072303.1 MGP_NODShiLtJ_G0029550.1 mouse_genomes_project 5 105589894 105603130 + MGP_NODShiLtJ_P0072303 Art3 protein_coding protein_coding MGP_NODShiLtJ_T0008377.1 MGP_NODShiLtJ_G0006788.1 mouse_genomes_project 5 169302228 169354651 - Gm15406 lincRNA lincRNA MGP_NODShiLtJ_T0008379.1 MGP_NODShiLtJ_G0006788.1 mouse_genomes_project 5 169308013 169354594 - Gm15406 lincRNA lincRNA MGP_NODShiLtJ_T0001411.1 MGP_NODShiLtJ_G0001330.1 mouse_genomes_project 5 6665967 6666185 + TEC TEC MGP_NODShiLtJ_T0075023.1 MGP_NODShiLtJ_G0030069.1 mouse_genomes_project 5 157216868 157231870 - MGP_NODShiLtJ_P0075023 Gm43720 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072571.1 MGP_NODShiLtJ_G0029605.1 mouse_genomes_project 5 118596663 118620978 - MGP_NODShiLtJ_P0072571 Klhl8 protein_coding protein_coding MGP_NODShiLtJ_T0072572.1 MGP_NODShiLtJ_G0029605.1 mouse_genomes_project 5 118596663 118620978 - MGP_NODShiLtJ_P0072572 Klhl8 protein_coding protein_coding MGP_NODShiLtJ_T0072573.1 MGP_NODShiLtJ_G0029605.1 mouse_genomes_project 5 118596763 118647549 - MGP_NODShiLtJ_P0072573 Klhl8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0072574.1 MGP_NODShiLtJ_G0029605.1 mouse_genomes_project 5 118596770 118620978 - MGP_NODShiLtJ_P0072574 Klhl8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072575.1 MGP_NODShiLtJ_G0029605.1 mouse_genomes_project 5 118605000 118609060 - Klhl8 protein_coding retained_intron MGP_NODShiLtJ_T0010557.1 MGP_NODShiLtJ_G0008690.1 mouse_genomes_project 5 431468 431575 + Gm26238 miRNA miRNA MGP_NODShiLtJ_T0001643.1 MGP_NODShiLtJ_G0001558.1 mouse_genomes_project 5 81647843 81650199 - TEC TEC MGP_NODShiLtJ_T0001644.1 MGP_NODShiLtJ_G0001558.1 mouse_genomes_project 5 81649552 81650199 - TEC pseudogene MGP_NODShiLtJ_T0015081.1 MGP_NODShiLtJ_G0013189.1 mouse_genomes_project 5 165123628 165123821 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014882.1 MGP_NODShiLtJ_G0012990.1 mouse_genomes_project 5 68304252 68304721 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070342.1 MGP_NODShiLtJ_G0029195.1 mouse_genomes_project 5 31831029 31841333 + MGP_NODShiLtJ_P0070342 Slc35f6 protein_coding protein_coding MGP_NODShiLtJ_T0070343.1 MGP_NODShiLtJ_G0029195.1 mouse_genomes_project 5 31831041 31836373 + Slc35f6 protein_coding retained_intron MGP_NODShiLtJ_T0070344.1 MGP_NODShiLtJ_G0029195.1 mouse_genomes_project 5 31831055 31841280 + MGP_NODShiLtJ_P0070344 Slc35f6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070345.1 MGP_NODShiLtJ_G0029195.1 mouse_genomes_project 5 31831064 31839189 + Slc35f6 protein_coding retained_intron MGP_NODShiLtJ_T0070346.1 MGP_NODShiLtJ_G0029195.1 mouse_genomes_project 5 31831100 31841280 + MGP_NODShiLtJ_P0070346 Slc35f6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070347.1 MGP_NODShiLtJ_G0029195.1 mouse_genomes_project 5 31831110 31842832 + MGP_NODShiLtJ_P0070347 Slc35f6 protein_coding protein_coding MGP_NODShiLtJ_T0075056.1 MGP_NODShiLtJ_G0030075.1 mouse_genomes_project 5 157837687 157896665 + MGP_NODShiLtJ_P0075056 Fam20c protein_coding protein_coding MGP_NODShiLtJ_T0075057.1 MGP_NODShiLtJ_G0030075.1 mouse_genomes_project 5 157838256 157895969 + MGP_NODShiLtJ_P0075057 Fam20c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075058.1 MGP_NODShiLtJ_G0030075.1 mouse_genomes_project 5 157838260 157842023 + Fam20c protein_coding retained_intron MGP_NODShiLtJ_T0075059.1 MGP_NODShiLtJ_G0030075.1 mouse_genomes_project 5 157870727 157895747 + Fam20c protein_coding processed_transcript MGP_NODShiLtJ_T0075060.1 MGP_NODShiLtJ_G0030075.1 mouse_genomes_project 5 157873001 157893872 + Fam20c protein_coding processed_transcript MGP_NODShiLtJ_T0075061.1 MGP_NODShiLtJ_G0030075.1 mouse_genomes_project 5 157893722 157895993 + Fam20c protein_coding retained_intron MGP_NODShiLtJ_T0001583.1 MGP_NODShiLtJ_G0001499.1 mouse_genomes_project 5 69646667 69649976 - TEC TEC MGP_NODShiLtJ_T0073631.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138732612 138756534 - MGP_NODShiLtJ_P0073631 Mapkapk5 protein_coding protein_coding MGP_NODShiLtJ_T0073632.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138732622 138755829 - MGP_NODShiLtJ_P0073632 Mapkapk5 protein_coding protein_coding MGP_NODShiLtJ_T0073633.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138732626 138734830 - Mapkapk5 protein_coding retained_intron MGP_NODShiLtJ_T0073634.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138732626 138733413 - Mapkapk5 protein_coding retained_intron MGP_NODShiLtJ_T0073635.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138732626 138734763 - MGP_NODShiLtJ_P0073635 Mapkapk5 protein_coding protein_coding MGP_NODShiLtJ_T0073636.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138732630 138746322 - Mapkapk5 protein_coding processed_transcript MGP_NODShiLtJ_T0073637.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138732719 138755829 - MGP_NODShiLtJ_P0073637 Mapkapk5 protein_coding protein_coding MGP_NODShiLtJ_T0073638.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138732719 138755829 - MGP_NODShiLtJ_P0073638 Mapkapk5 protein_coding protein_coding MGP_NODShiLtJ_T0073639.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138733338 138755829 - Mapkapk5 protein_coding processed_transcript MGP_NODShiLtJ_T0073640.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138734134 138740230 - Mapkapk5 protein_coding retained_intron MGP_NODShiLtJ_T0073641.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138741771 138744452 - MGP_NODShiLtJ_P0073641 Mapkapk5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073642.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138741966 138755860 - MGP_NODShiLtJ_P0073642 Mapkapk5 protein_coding protein_coding MGP_NODShiLtJ_T0073643.1 MGP_NODShiLtJ_G0029832.1 mouse_genomes_project 5 138743055 138745785 - Mapkapk5 protein_coding processed_transcript MGP_NODShiLtJ_T0071414.1 MGP_NODShiLtJ_G0029366.1 mouse_genomes_project 5 71067969 71150950 + MGP_NODShiLtJ_P0071414 0610040J01Rik protein_coding protein_coding MGP_NODShiLtJ_T0071415.1 MGP_NODShiLtJ_G0029366.1 mouse_genomes_project 5 71068126 71149892 + MGP_NODShiLtJ_P0071415 0610040J01Rik protein_coding protein_coding MGP_NODShiLtJ_T0071416.1 MGP_NODShiLtJ_G0029366.1 mouse_genomes_project 5 71127709 71149591 + MGP_NODShiLtJ_P0071416 0610040J01Rik protein_coding protein_coding MGP_NODShiLtJ_T0071417.1 MGP_NODShiLtJ_G0029366.1 mouse_genomes_project 5 71128876 71149854 + MGP_NODShiLtJ_P0071417 0610040J01Rik protein_coding protein_coding MGP_NODShiLtJ_T0073550.1 MGP_NODShiLtJ_G0029811.1 mouse_genomes_project 5 137647834 137653925 + MGP_NODShiLtJ_P0073550 Rasal1 protein_coding protein_coding MGP_NODShiLtJ_T0073551.1 MGP_NODShiLtJ_G0029811.1 mouse_genomes_project 5 137647844 137682037 + MGP_NODShiLtJ_P0073551 Rasal1 protein_coding protein_coding MGP_NODShiLtJ_T0073552.1 MGP_NODShiLtJ_G0029811.1 mouse_genomes_project 5 137648210 137682037 + MGP_NODShiLtJ_P0073552 Rasal1 protein_coding protein_coding MGP_NODShiLtJ_T0073553.1 MGP_NODShiLtJ_G0029811.1 mouse_genomes_project 5 137652391 137658677 + Rasal1 protein_coding processed_transcript MGP_NODShiLtJ_T0073554.1 MGP_NODShiLtJ_G0029811.1 mouse_genomes_project 5 137681032 137681746 + Rasal1 protein_coding retained_intron MGP_NODShiLtJ_T0014798.1 MGP_NODShiLtJ_G0012906.1 mouse_genomes_project 5 27812016 27812151 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074180.1 MGP_NODShiLtJ_G0029912.1 mouse_genomes_project 5 143038486 143059938 - MGP_NODShiLtJ_P0074180 Dhx37 protein_coding protein_coding MGP_NODShiLtJ_T0074181.1 MGP_NODShiLtJ_G0029912.1 mouse_genomes_project 5 143039410 143040520 - MGP_NODShiLtJ_P0074181 Dhx37 protein_coding protein_coding MGP_NODShiLtJ_T0074182.1 MGP_NODShiLtJ_G0029912.1 mouse_genomes_project 5 143040922 143043472 - Dhx37 protein_coding retained_intron MGP_NODShiLtJ_T0074183.1 MGP_NODShiLtJ_G0029912.1 mouse_genomes_project 5 143048185 143051373 - MGP_NODShiLtJ_P0074183 Dhx37 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0014946.1 MGP_NODShiLtJ_G0013054.1 mouse_genomes_project 5 101328402 101328523 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008033.1 MGP_NODShiLtJ_G0006542.1 mouse_genomes_project 5 39852023 39856169 + Gm20052 lincRNA lincRNA MGP_NODShiLtJ_T0008034.1 MGP_NODShiLtJ_G0006542.1 mouse_genomes_project 5 39852190 39853225 + Gm20052 lincRNA lincRNA MGP_NODShiLtJ_T0008035.1 MGP_NODShiLtJ_G0006542.1 mouse_genomes_project 5 39852601 39855051 + Gm20052 lincRNA lincRNA MGP_NODShiLtJ_T0008036.1 MGP_NODShiLtJ_G0006542.1 mouse_genomes_project 5 39852947 39855528 + Gm20052 lincRNA lincRNA MGP_NODShiLtJ_T0008037.1 MGP_NODShiLtJ_G0006542.1 mouse_genomes_project 5 39852958 39855389 + Gm20052 lincRNA lincRNA MGP_NODShiLtJ_T0073481.1 MGP_NODShiLtJ_G0029795.1 mouse_genomes_project 5 134973697 135030084 - MGP_NODShiLtJ_P0073481 Rnft2 protein_coding protein_coding MGP_NODShiLtJ_T0073482.1 MGP_NODShiLtJ_G0029795.1 mouse_genomes_project 5 134973703 135030339 - MGP_NODShiLtJ_P0073482 Rnft2 protein_coding protein_coding MGP_NODShiLtJ_T0073483.1 MGP_NODShiLtJ_G0029795.1 mouse_genomes_project 5 134976458 135014399 - Rnft2 protein_coding retained_intron MGP_NODShiLtJ_T0073484.1 MGP_NODShiLtJ_G0029795.1 mouse_genomes_project 5 134976940 134985413 - MGP_NODShiLtJ_P0073484 Rnft2 protein_coding protein_coding MGP_NODShiLtJ_T0073485.1 MGP_NODShiLtJ_G0029795.1 mouse_genomes_project 5 135019407 135030217 - MGP_NODShiLtJ_P0073485 Rnft2 protein_coding protein_coding MGP_NODShiLtJ_T0073486.1 MGP_NODShiLtJ_G0029795.1 mouse_genomes_project 5 135022178 135028174 - Rnft2 protein_coding retained_intron MGP_NODShiLtJ_T0073487.1 MGP_NODShiLtJ_G0029795.1 mouse_genomes_project 5 135022756 135030215 - MGP_NODShiLtJ_P0073487 Rnft2 protein_coding protein_coding MGP_NODShiLtJ_T0001856.1 MGP_NODShiLtJ_G0001768.1 mouse_genomes_project 5 162908652 162911394 + TEC TEC MGP_NODShiLtJ_T0075187.1 MGP_NODShiLtJ_G0030101.1 mouse_genomes_project 5 159571062 159628335 - MGP_NODShiLtJ_P0075187 Snx8 protein_coding protein_coding MGP_NODShiLtJ_T0075188.1 MGP_NODShiLtJ_G0030101.1 mouse_genomes_project 5 159571067 159593371 - MGP_NODShiLtJ_P0075188 Snx8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075189.1 MGP_NODShiLtJ_G0030101.1 mouse_genomes_project 5 159585744 159586503 - Snx8 protein_coding retained_intron MGP_NODShiLtJ_T0075190.1 MGP_NODShiLtJ_G0030101.1 mouse_genomes_project 5 159586420 159599996 - MGP_NODShiLtJ_P0075190 Snx8 protein_coding protein_coding MGP_NODShiLtJ_T0075191.1 MGP_NODShiLtJ_G0030101.1 mouse_genomes_project 5 159586436 159628335 - MGP_NODShiLtJ_P0075191 Snx8 protein_coding protein_coding MGP_NODShiLtJ_T0018047.1 MGP_NODShiLtJ_G0015481.1 mouse_genomes_project 5 158266260 158269378 - Gm15672 processed_transcript processed_transcript MGP_NODShiLtJ_T0001610.1 MGP_NODShiLtJ_G0001525.1 mouse_genomes_project 5 73559775 73564025 - TEC TEC MGP_NODShiLtJ_T0073933.1 MGP_NODShiLtJ_G0029875.1 mouse_genomes_project 5 141034606 141066277 - MGP_NODShiLtJ_P0073933 Vps33a protein_coding protein_coding MGP_NODShiLtJ_T0073934.1 MGP_NODShiLtJ_G0029875.1 mouse_genomes_project 5 141047980 141052831 - Vps33a protein_coding retained_intron MGP_NODShiLtJ_T0073935.1 MGP_NODShiLtJ_G0029875.1 mouse_genomes_project 5 141057173 141062831 - Vps33a protein_coding retained_intron MGP_NODShiLtJ_T0073936.1 MGP_NODShiLtJ_G0029875.1 mouse_genomes_project 5 141058875 141066218 - MGP_NODShiLtJ_P0073936 Vps33a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072092.1 MGP_NODShiLtJ_G0029493.1 mouse_genomes_project 5 100339141 100360053 + MGP_NODShiLtJ_P0072092 Csn1s2a protein_coding protein_coding MGP_NODShiLtJ_T0072093.1 MGP_NODShiLtJ_G0029493.1 mouse_genomes_project 5 100339141 100359954 + MGP_NODShiLtJ_P0072093 Csn1s2a protein_coding protein_coding MGP_NODShiLtJ_T0072094.1 MGP_NODShiLtJ_G0029493.1 mouse_genomes_project 5 100339141 100360053 + MGP_NODShiLtJ_P0072094 Csn1s2a protein_coding protein_coding MGP_NODShiLtJ_T0072095.1 MGP_NODShiLtJ_G0029493.1 mouse_genomes_project 5 100339155 100359954 + MGP_NODShiLtJ_P0072095 Csn1s2a protein_coding protein_coding MGP_NODShiLtJ_T0072096.1 MGP_NODShiLtJ_G0029493.1 mouse_genomes_project 5 100339156 100350640 + Csn1s2a protein_coding retained_intron MGP_NODShiLtJ_T0072097.1 MGP_NODShiLtJ_G0029493.1 mouse_genomes_project 5 100342363 100345324 + Csn1s2a protein_coding retained_intron MGP_NODShiLtJ_T0072098.1 MGP_NODShiLtJ_G0029493.1 mouse_genomes_project 5 100344046 100350451 + Csn1s2a protein_coding retained_intron MGP_NODShiLtJ_T0072099.1 MGP_NODShiLtJ_G0029493.1 mouse_genomes_project 5 100346124 100353224 + Csn1s2a protein_coding retained_intron MGP_NODShiLtJ_T0073240.1 MGP_NODShiLtJ_G0029749.1 mouse_genomes_project 5 131241917 131273464 + MGP_NODShiLtJ_P0073240 4930519G04Rik protein_coding protein_coding MGP_NODShiLtJ_T0073242.1 MGP_NODShiLtJ_G0029749.1 mouse_genomes_project 5 131249014 131266164 + 4930519G04Rik protein_coding retained_intron MGP_NODShiLtJ_T0073243.1 MGP_NODShiLtJ_G0029749.1 mouse_genomes_project 5 131252803 131269328 + MGP_NODShiLtJ_P0073243 4930519G04Rik protein_coding protein_coding MGP_NODShiLtJ_T0073244.1 MGP_NODShiLtJ_G0029749.1 mouse_genomes_project 5 131254809 131269328 + MGP_NODShiLtJ_P0073244 4930519G04Rik protein_coding protein_coding MGP_NODShiLtJ_T0098202.1 MGP_NODShiLtJ_G0036614.1 mouse_genomes_project 5 2064157 2064284 - Gm22897 scaRNA scaRNA MGP_NODShiLtJ_T0004830.1 MGP_NODShiLtJ_G0004148.1 mouse_genomes_project 5 167360679 167405278 - 2210019I11Rik antisense antisense MGP_NODShiLtJ_T0004831.1 MGP_NODShiLtJ_G0004148.1 mouse_genomes_project 5 167362812 167405259 - 2210019I11Rik antisense antisense MGP_NODShiLtJ_T0004832.1 MGP_NODShiLtJ_G0004148.1 mouse_genomes_project 5 167372133 167404752 - 2210019I11Rik antisense antisense MGP_NODShiLtJ_T0001663.1 MGP_NODShiLtJ_G0001577.1 mouse_genomes_project 5 85316099 85320275 - TEC TEC MGP_NODShiLtJ_T0001750.1 MGP_NODShiLtJ_G0001664.1 mouse_genomes_project 5 135493246 135498248 + TEC TEC MGP_NODShiLtJ_T0075589.1 MGP_NODShiLtJ_G0030197.1 mouse_genomes_project 5 167465457 167553636 - MGP_NODShiLtJ_P0075589 Flt3 protein_coding protein_coding MGP_NODShiLtJ_T0075590.1 MGP_NODShiLtJ_G0030197.1 mouse_genomes_project 5 167510091 167553636 - Flt3 protein_coding processed_transcript MGP_NODShiLtJ_T0070939.1 MGP_NODShiLtJ_G0029281.1 mouse_genomes_project 5 37111337 37114782 + MGP_NODShiLtJ_P0070939 Adra2c protein_coding protein_coding MGP_NODShiLtJ_T0001571.1 MGP_NODShiLtJ_G0001487.1 mouse_genomes_project 5 63090516 63093117 + TEC TEC MGP_NODShiLtJ_T0014804.1 MGP_NODShiLtJ_G0012912.1 mouse_genomes_project 5 29025739 29027048 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070395.1 MGP_NODShiLtJ_G0029201.1 mouse_genomes_project 5 32109047 32110951 - MGP_NODShiLtJ_P0070395 Ost4 protein_coding protein_coding MGP_NODShiLtJ_T0070396.1 MGP_NODShiLtJ_G0029201.1 mouse_genomes_project 5 32109680 32110888 - MGP_NODShiLtJ_P0070396 Ost4 protein_coding protein_coding MGP_NODShiLtJ_T0001466.1 MGP_NODShiLtJ_G0001382.1 mouse_genomes_project 5 34002080 34006828 - TEC TEC MGP_NODShiLtJ_T0001646.1 MGP_NODShiLtJ_G0001560.1 mouse_genomes_project 5 81971130 81973605 - TEC TEC MGP_NODShiLtJ_T0075517.1 MGP_NODShiLtJ_G0030173.1 mouse_genomes_project 5 165162598 165195798 - MGP_NODShiLtJ_P0075517 Cyp3a16 protein_coding protein_coding MGP_NODShiLtJ_T0014950.1 MGP_NODShiLtJ_G0013058.1 mouse_genomes_project 5 103055551 103056097 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010612.1 MGP_NODShiLtJ_G0008745.1 mouse_genomes_project 5 143111148 143111225 + Gm27551 miRNA miRNA MGP_NODShiLtJ_T0070509.1 MGP_NODShiLtJ_G0029219.1 mouse_genomes_project 5 32436018 32439341 - MGP_NODShiLtJ_P0070509 Zfp513 protein_coding protein_coding MGP_NODShiLtJ_T0070510.1 MGP_NODShiLtJ_G0029219.1 mouse_genomes_project 5 32436020 32439080 - MGP_NODShiLtJ_P0070510 Zfp513 protein_coding protein_coding MGP_NODShiLtJ_T0070511.1 MGP_NODShiLtJ_G0029219.1 mouse_genomes_project 5 32436537 32437799 - Zfp513 protein_coding processed_transcript MGP_NODShiLtJ_T0070512.1 MGP_NODShiLtJ_G0029219.1 mouse_genomes_project 5 32436818 32437324 - MGP_NODShiLtJ_P0070512 Zfp513 protein_coding protein_coding MGP_NODShiLtJ_T0070513.1 MGP_NODShiLtJ_G0029219.1 mouse_genomes_project 5 32436918 32437800 - Zfp513 protein_coding processed_transcript MGP_NODShiLtJ_T0070514.1 MGP_NODShiLtJ_G0029219.1 mouse_genomes_project 5 32437026 32437800 - Zfp513 protein_coding processed_transcript MGP_NODShiLtJ_T0070515.1 MGP_NODShiLtJ_G0029219.1 mouse_genomes_project 5 32437706 32439253 - MGP_NODShiLtJ_P0070515 Zfp513 protein_coding protein_coding MGP_NODShiLtJ_T0070516.1 MGP_NODShiLtJ_G0029219.1 mouse_genomes_project 5 32437793 32439263 - MGP_NODShiLtJ_P0070516 Zfp513 protein_coding protein_coding MGP_NODShiLtJ_T0071601.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74283797 74520450 + Limch1 protein_coding retained_intron MGP_NODShiLtJ_T0071602.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74283837 74286366 + Limch1 protein_coding retained_intron MGP_NODShiLtJ_T0071603.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74283853 74600262 + MGP_NODShiLtJ_P0071603 Limch1 protein_coding protein_coding MGP_NODShiLtJ_T0071604.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74283859 74498705 + MGP_NODShiLtJ_P0071604 Limch1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071605.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74283880 74601353 + MGP_NODShiLtJ_P0071605 Limch1 protein_coding protein_coding MGP_NODShiLtJ_T0071606.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74440512 74514941 + MGP_NODShiLtJ_P0071606 Limch1 protein_coding protein_coding MGP_NODShiLtJ_T0071607.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74513792 74598881 + Limch1 protein_coding processed_transcript MGP_NODShiLtJ_T0071608.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74514203 74601344 + MGP_NODShiLtJ_P0071608 Limch1 protein_coding protein_coding MGP_NODShiLtJ_T0071609.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74514352 74581476 + Limch1 protein_coding retained_intron MGP_NODShiLtJ_T0071610.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74514364 74544534 + MGP_NODShiLtJ_P0071610 Limch1 protein_coding protein_coding MGP_NODShiLtJ_T0071611.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74514437 74520703 + Limch1 protein_coding retained_intron MGP_NODShiLtJ_T0071612.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74514748 74544564 + MGP_NODShiLtJ_P0071612 Limch1 protein_coding protein_coding MGP_NODShiLtJ_T0071613.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74522805 74545010 + Limch1 protein_coding processed_transcript MGP_NODShiLtJ_T0071614.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74542864 74545115 + Limch1 protein_coding retained_intron MGP_NODShiLtJ_T0071615.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74588533 74598833 + Limch1 protein_coding processed_transcript MGP_NODShiLtJ_T0071616.1 MGP_NODShiLtJ_G0029394.1 mouse_genomes_project 5 74588588 74598828 + MGP_NODShiLtJ_P0071616 Limch1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001665.1 MGP_NODShiLtJ_G0001579.1 mouse_genomes_project 5 91578120 91581836 + TEC TEC MGP_NODShiLtJ_T0071727.1 MGP_NODShiLtJ_G0029417.1 mouse_genomes_project 5 81373956 81397189 + MGP_NODShiLtJ_P0071727 Nipal1 protein_coding protein_coding MGP_NODShiLtJ_T0071728.1 MGP_NODShiLtJ_G0029417.1 mouse_genomes_project 5 81373974 81393748 + MGP_NODShiLtJ_P0071728 Nipal1 protein_coding protein_coding MGP_NODShiLtJ_T0071729.1 MGP_NODShiLtJ_G0029417.1 mouse_genomes_project 5 81374003 81385305 + Nipal1 protein_coding retained_intron MGP_NODShiLtJ_T0011486.1 MGP_NODShiLtJ_G0009619.1 mouse_genomes_project 5 89445866 89446157 - Gm22553 misc_RNA misc_RNA MGP_NODShiLtJ_T0010603.1 MGP_NODShiLtJ_G0008736.1 mouse_genomes_project 5 131066553 131066617 + Mir7028 miRNA miRNA MGP_NODShiLtJ_T0075235.1 MGP_NODShiLtJ_G0030112.1 mouse_genomes_project 5 160573733 161602567 + MGP_NODShiLtJ_P0075235 Sdk1 protein_coding protein_coding MGP_NODShiLtJ_T0075236.1 MGP_NODShiLtJ_G0030112.1 mouse_genomes_project 5 160574161 160945806 + Sdk1 protein_coding retained_intron MGP_NODShiLtJ_T0075237.1 MGP_NODShiLtJ_G0030112.1 mouse_genomes_project 5 160720071 161334239 + Sdk1 protein_coding retained_intron MGP_NODShiLtJ_T0075238.1 MGP_NODShiLtJ_G0030112.1 mouse_genomes_project 5 161228897 161600174 + MGP_NODShiLtJ_P0075238 Sdk1 protein_coding protein_coding MGP_NODShiLtJ_T0072918.1 MGP_NODShiLtJ_G0029688.1 mouse_genomes_project 5 126294810 126317456 + Lrcol1 protein_coding retained_intron MGP_NODShiLtJ_T0072919.1 MGP_NODShiLtJ_G0029688.1 mouse_genomes_project 5 126294810 126317456 + MGP_NODShiLtJ_P0072919 Lrcol1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072920.1 MGP_NODShiLtJ_G0029688.1 mouse_genomes_project 5 126294810 126317456 + MGP_NODShiLtJ_P0072920 Lrcol1 protein_coding protein_coding MGP_NODShiLtJ_T0072921.1 MGP_NODShiLtJ_G0029688.1 mouse_genomes_project 5 126315552 126317529 + MGP_NODShiLtJ_P0072921 Lrcol1 protein_coding protein_coding MGP_NODShiLtJ_T0072922.1 MGP_NODShiLtJ_G0029688.1 mouse_genomes_project 5 126315614 126317466 + MGP_NODShiLtJ_P0072922 Lrcol1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100613.1 MGP_NODShiLtJ_G0039007.1 mouse_genomes_project 5 67109180 67109303 - Gm23708 snoRNA snoRNA MGP_NODShiLtJ_T0004602.1 MGP_NODShiLtJ_G0003983.1 mouse_genomes_project 5 33695273 33731284 - Gm36840 antisense antisense MGP_NODShiLtJ_T0073489.1 MGP_NODShiLtJ_G0029797.1 mouse_genomes_project 5 135404822 135578256 + Med13l protein_coding retained_intron MGP_NODShiLtJ_T0073490.1 MGP_NODShiLtJ_G0029797.1 mouse_genomes_project 5 135404862 135623967 + MGP_NODShiLtJ_P0073490 Med13l protein_coding protein_coding MGP_NODShiLtJ_T0073491.1 MGP_NODShiLtJ_G0029797.1 mouse_genomes_project 5 135404882 135622445 + MGP_NODShiLtJ_P0073491 Med13l protein_coding protein_coding MGP_NODShiLtJ_T0073492.1 MGP_NODShiLtJ_G0029797.1 mouse_genomes_project 5 135405722 135441440 + Med13l protein_coding processed_transcript MGP_NODShiLtJ_T0073493.1 MGP_NODShiLtJ_G0029797.1 mouse_genomes_project 5 135606089 135622445 + Med13l protein_coding retained_intron MGP_NODShiLtJ_T0073494.1 MGP_NODShiLtJ_G0029797.1 mouse_genomes_project 5 135608919 135622445 + Med13l protein_coding retained_intron MGP_NODShiLtJ_T0014745.1 MGP_NODShiLtJ_G0012853.1 mouse_genomes_project 5 12940687 12941194 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004826.1 MGP_NODShiLtJ_G0004145.1 mouse_genomes_project 5 162902058 162916863 - Gm20635 antisense antisense MGP_NODShiLtJ_T0001508.1 MGP_NODShiLtJ_G0001424.1 mouse_genomes_project 5 47479952 47482171 - TEC TEC MGP_NODShiLtJ_T0074574.1 MGP_NODShiLtJ_G0029982.1 mouse_genomes_project 5 153787553 153802543 + MGP_NODShiLtJ_P0074574 Trim50 protein_coding protein_coding MGP_NODShiLtJ_T0074575.1 MGP_NODShiLtJ_G0029982.1 mouse_genomes_project 5 153787554 153802894 + MGP_NODShiLtJ_P0074575 Trim50 protein_coding protein_coding MGP_NODShiLtJ_T0071922.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85960413 85992853 - MGP_NODShiLtJ_P0071922 Aasdh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071923.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85962689 85963422 - Aasdh protein_coding processed_transcript MGP_NODShiLtJ_T0071924.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85962689 85992940 - MGP_NODShiLtJ_P0071924 Aasdh protein_coding protein_coding MGP_NODShiLtJ_T0071925.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85962694 85992939 - MGP_NODShiLtJ_P0071925 Aasdh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071926.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85962740 85989780 - MGP_NODShiLtJ_P0071926 Aasdh protein_coding protein_coding MGP_NODShiLtJ_T0071927.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85962922 85970017 - MGP_NODShiLtJ_P0071927 Aasdh protein_coding protein_coding MGP_NODShiLtJ_T0071928.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85967511 85992918 - Aasdh protein_coding retained_intron MGP_NODShiLtJ_T0071929.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85970473 85992913 - MGP_NODShiLtJ_P0071929 Aasdh protein_coding protein_coding MGP_NODShiLtJ_T0071930.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85970488 85972286 - Aasdh protein_coding retained_intron MGP_NODShiLtJ_T0071931.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85980214 85982668 - Aasdh protein_coding retained_intron MGP_NODShiLtJ_T0071932.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85982039 85992918 - Aasdh protein_coding processed_transcript MGP_NODShiLtJ_T0071933.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85983831 85992918 - Aasdh protein_coding retained_intron MGP_NODShiLtJ_T0071934.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85989598 85992816 - MGP_NODShiLtJ_P0071934 Aasdh protein_coding protein_coding MGP_NODShiLtJ_T0071935.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85989687 85992929 - MGP_NODShiLtJ_P0071935 Aasdh protein_coding protein_coding MGP_NODShiLtJ_T0071936.1 MGP_NODShiLtJ_G0029451.1 mouse_genomes_project 5 85991755 85992854 - Aasdh protein_coding processed_transcript MGP_NODShiLtJ_T0072398.1 MGP_NODShiLtJ_G0029571.1 mouse_genomes_project 5 111544816 111546696 - MGP_NODShiLtJ_P0072398 Gk2 protein_coding protein_coding MGP_NODShiLtJ_T0073471.1 MGP_NODShiLtJ_G0029792.1 mouse_genomes_project 5 134796843 134835122 + MGP_NODShiLtJ_P0073471 Tesc protein_coding protein_coding MGP_NODShiLtJ_T0073472.1 MGP_NODShiLtJ_G0029792.1 mouse_genomes_project 5 134796865 134835089 + MGP_NODShiLtJ_P0073472 Tesc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073473.1 MGP_NODShiLtJ_G0029792.1 mouse_genomes_project 5 134796970 134835114 + Tesc protein_coding retained_intron MGP_NODShiLtJ_T0073474.1 MGP_NODShiLtJ_G0029792.1 mouse_genomes_project 5 134806362 134835017 + Tesc protein_coding processed_transcript MGP_NODShiLtJ_T0073475.1 MGP_NODShiLtJ_G0029792.1 mouse_genomes_project 5 134812553 134826927 + Tesc protein_coding processed_transcript MGP_NODShiLtJ_T0073476.1 MGP_NODShiLtJ_G0029792.1 mouse_genomes_project 5 134812554 134819747 + Tesc protein_coding processed_transcript MGP_NODShiLtJ_T0001771.1 MGP_NODShiLtJ_G0001685.1 mouse_genomes_project 5 139933012 139933574 - TEC TEC MGP_NODShiLtJ_T0015044.1 MGP_NODShiLtJ_G0013152.1 mouse_genomes_project 5 154099115 154099473 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072446.1 MGP_NODShiLtJ_G0029584.1 mouse_genomes_project 5 114465919 114497250 + MGP_NODShiLtJ_P0072446 Enoph1 protein_coding protein_coding MGP_NODShiLtJ_T0072447.1 MGP_NODShiLtJ_G0029584.1 mouse_genomes_project 5 114465978 114497250 + MGP_NODShiLtJ_P0072447 Enoph1 protein_coding protein_coding MGP_NODShiLtJ_T0072448.1 MGP_NODShiLtJ_G0029584.1 mouse_genomes_project 5 114466002 114489846 + Enoph1 protein_coding retained_intron MGP_NODShiLtJ_T0072449.1 MGP_NODShiLtJ_G0029584.1 mouse_genomes_project 5 114490460 114492687 + Enoph1 protein_coding processed_transcript MGP_NODShiLtJ_T0001717.1 MGP_NODShiLtJ_G0001631.1 mouse_genomes_project 5 127176659 127179038 + TEC TEC MGP_NODShiLtJ_T0014752.1 MGP_NODShiLtJ_G0012860.1 mouse_genomes_project 5 17277496 17278559 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001537.1 MGP_NODShiLtJ_G0001453.1 mouse_genomes_project 5 52533542 52535999 - TEC TEC MGP_NODShiLtJ_T0101151.1 MGP_NODShiLtJ_G0039482.1 mouse_genomes_project 5 81352653 81353828 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0072149.1 MGP_NODShiLtJ_G0029515.1 mouse_genomes_project 5 101710541 102088567 + MGP_NODShiLtJ_P0072149 Slc4a4 protein_coding protein_coding MGP_NODShiLtJ_T0072150.1 MGP_NODShiLtJ_G0029515.1 mouse_genomes_project 5 101710984 101711978 + Slc4a4 protein_coding processed_transcript MGP_NODShiLtJ_T0072151.1 MGP_NODShiLtJ_G0029515.1 mouse_genomes_project 5 101711020 102083810 + MGP_NODShiLtJ_P0072151 Slc4a4 protein_coding protein_coding MGP_NODShiLtJ_T0072152.1 MGP_NODShiLtJ_G0029515.1 mouse_genomes_project 5 101711022 102084737 + MGP_NODShiLtJ_P0072152 Slc4a4 protein_coding protein_coding MGP_NODShiLtJ_T0072153.1 MGP_NODShiLtJ_G0029515.1 mouse_genomes_project 5 101759438 101780686 + MGP_NODShiLtJ_P0072153 Slc4a4 protein_coding protein_coding MGP_NODShiLtJ_T0072154.1 MGP_NODShiLtJ_G0029515.1 mouse_genomes_project 5 101856165 102083804 + MGP_NODShiLtJ_P0072154 Slc4a4 protein_coding protein_coding MGP_NODShiLtJ_T0072155.1 MGP_NODShiLtJ_G0029515.1 mouse_genomes_project 5 101856276 101871386 + MGP_NODShiLtJ_P0072155 Slc4a4 protein_coding protein_coding MGP_NODShiLtJ_T0072156.1 MGP_NODShiLtJ_G0029515.1 mouse_genomes_project 5 101856291 101955270 + MGP_NODShiLtJ_P0072156 Slc4a4 protein_coding protein_coding MGP_NODShiLtJ_T0014841.1 MGP_NODShiLtJ_G0012949.1 mouse_genomes_project 5 43888937 43889406 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015102.1 MGP_NODShiLtJ_G0013210.1 mouse_genomes_project 5 170963690 170964254 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008360.1 MGP_NODShiLtJ_G0006773.1 mouse_genomes_project 5 163298681 163306201 + D130017N08Rik lincRNA lincRNA MGP_NODShiLtJ_T0008361.1 MGP_NODShiLtJ_G0006773.1 mouse_genomes_project 5 163300188 163307541 + D130017N08Rik lincRNA lincRNA MGP_NODShiLtJ_T0008363.1 MGP_NODShiLtJ_G0006773.1 mouse_genomes_project 5 163306701 163308981 + D130017N08Rik lincRNA lincRNA MGP_NODShiLtJ_T0008115.1 MGP_NODShiLtJ_G0006607.1 mouse_genomes_project 5 86583196 86622203 + Gm34728 lincRNA lincRNA MGP_NODShiLtJ_T0074227.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146903411 146927975 - MGP_NODShiLtJ_P0074227 Stx2 protein_coding protein_coding MGP_NODShiLtJ_T0074228.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146903417 146927936 - MGP_NODShiLtJ_P0074228 Stx2 protein_coding protein_coding MGP_NODShiLtJ_T0074229.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146905198 146908212 - Stx2 protein_coding retained_intron MGP_NODShiLtJ_T0074230.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146907718 146908903 - Stx2 protein_coding retained_intron MGP_NODShiLtJ_T0074231.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146907961 146927468 - Stx2 protein_coding processed_transcript MGP_NODShiLtJ_T0074232.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146909695 146927950 - Stx2 protein_coding retained_intron MGP_NODShiLtJ_T0074233.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146912549 146927489 - MGP_NODShiLtJ_P0074233 Stx2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074234.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146912563 146918674 - MGP_NODShiLtJ_P0074234 Stx2 protein_coding protein_coding MGP_NODShiLtJ_T0074235.1 MGP_NODShiLtJ_G0029923.1 mouse_genomes_project 5 146918126 146927947 - Stx2 protein_coding retained_intron MGP_NODShiLtJ_T0099388.1 MGP_NODShiLtJ_G0037782.1 mouse_genomes_project 5 130217023 130217104 - Gm22056 snRNA snRNA MGP_NODShiLtJ_T0014814.1 MGP_NODShiLtJ_G0012922.1 mouse_genomes_project 5 33551591 33552174 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008019.1 MGP_NODShiLtJ_G0006534.1 mouse_genomes_project 5 35635852 35637556 + Gm42849 lincRNA lincRNA MGP_NODShiLtJ_T0004591.1 MGP_NODShiLtJ_G0003975.1 mouse_genomes_project 5 25676067 25679972 + Prkag2os1 antisense antisense MGP_NODShiLtJ_T0014780.1 MGP_NODShiLtJ_G0012888.1 mouse_genomes_project 5 23504605 23505184 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011488.1 MGP_NODShiLtJ_G0009621.1 mouse_genomes_project 5 105123936 105124212 + Gm24113 misc_RNA misc_RNA MGP_NODShiLtJ_T0014844.1 MGP_NODShiLtJ_G0012952.1 mouse_genomes_project 5 45040738 45041172 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008091.1 MGP_NODShiLtJ_G0006588.1 mouse_genomes_project 5 82050438 82056646 + Gm34411 lincRNA lincRNA MGP_NODShiLtJ_T0011504.1 MGP_NODShiLtJ_G0009637.1 mouse_genomes_project 5 152510752 152511040 + Gm24139 misc_RNA misc_RNA MGP_NODShiLtJ_T0074139.1 MGP_NODShiLtJ_G0029905.1 mouse_genomes_project 5 142389952 142418656 - MGP_NODShiLtJ_P0074139 Ccdc92 protein_coding protein_coding MGP_NODShiLtJ_T0074140.1 MGP_NODShiLtJ_G0029905.1 mouse_genomes_project 5 142391427 142418115 - MGP_NODShiLtJ_P0074140 Ccdc92 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074141.1 MGP_NODShiLtJ_G0029905.1 mouse_genomes_project 5 142391603 142407813 - MGP_NODShiLtJ_P0074141 Ccdc92 protein_coding protein_coding MGP_NODShiLtJ_T0073034.1 MGP_NODShiLtJ_G0029710.1 mouse_genomes_project 5 128561838 128739795 - MGP_NODShiLtJ_P0073034 Sez6l protein_coding protein_coding MGP_NODShiLtJ_T0073035.1 MGP_NODShiLtJ_G0029710.1 mouse_genomes_project 5 128561843 128739902 - MGP_NODShiLtJ_P0073035 Sez6l protein_coding protein_coding MGP_NODShiLtJ_T0073036.1 MGP_NODShiLtJ_G0029710.1 mouse_genomes_project 5 128561852 128740112 - MGP_NODShiLtJ_P0073036 Sez6l protein_coding protein_coding MGP_NODShiLtJ_T0073037.1 MGP_NODShiLtJ_G0029710.1 mouse_genomes_project 5 128564505 128740104 - MGP_NODShiLtJ_P0073037 Sez6l protein_coding protein_coding MGP_NODShiLtJ_T0070563.1 MGP_NODShiLtJ_G0029226.1 mouse_genomes_project 5 32544711 32580573 + MGP_NODShiLtJ_P0070563 Gckr protein_coding protein_coding MGP_NODShiLtJ_T0070564.1 MGP_NODShiLtJ_G0029226.1 mouse_genomes_project 5 32544822 32580554 + Gckr protein_coding retained_intron MGP_NODShiLtJ_T0070565.1 MGP_NODShiLtJ_G0029226.1 mouse_genomes_project 5 32544849 32580561 + MGP_NODShiLtJ_P0070565 Gckr protein_coding protein_coding MGP_NODShiLtJ_T0070566.1 MGP_NODShiLtJ_G0029226.1 mouse_genomes_project 5 32544880 32547849 + MGP_NODShiLtJ_P0070566 Gckr protein_coding protein_coding MGP_NODShiLtJ_T0070567.1 MGP_NODShiLtJ_G0029226.1 mouse_genomes_project 5 32545969 32554178 + Gckr protein_coding retained_intron MGP_NODShiLtJ_T0070568.1 MGP_NODShiLtJ_G0029226.1 mouse_genomes_project 5 32546774 32553084 + Gckr protein_coding retained_intron MGP_NODShiLtJ_T0070569.1 MGP_NODShiLtJ_G0029226.1 mouse_genomes_project 5 32579489 32580556 + Gckr protein_coding retained_intron MGP_NODShiLtJ_T0008116.1 MGP_NODShiLtJ_G0006608.1 mouse_genomes_project 5 86614472 86617836 + 1700017L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0074326.1 MGP_NODShiLtJ_G0029942.1 mouse_genomes_project 5 148095911 148159347 + MGP_NODShiLtJ_P0074326 Tpst1 protein_coding protein_coding MGP_NODShiLtJ_T0074327.1 MGP_NODShiLtJ_G0029942.1 mouse_genomes_project 5 148101951 148159347 + MGP_NODShiLtJ_P0074327 Tpst1 protein_coding protein_coding MGP_NODShiLtJ_T0074328.1 MGP_NODShiLtJ_G0029942.1 mouse_genomes_project 5 148117283 148125672 + MGP_NODShiLtJ_P0074328 Tpst1 protein_coding protein_coding MGP_NODShiLtJ_T0074329.1 MGP_NODShiLtJ_G0029942.1 mouse_genomes_project 5 148157574 148159330 + Tpst1 protein_coding retained_intron MGP_NODShiLtJ_T0072592.1 MGP_NODShiLtJ_G0029611.1 mouse_genomes_project 5 118940715 118951711 + MGP_NODShiLtJ_P0072592 Dspp protein_coding protein_coding MGP_NODShiLtJ_T0101143.1 MGP_NODShiLtJ_G0039475.1 mouse_genomes_project 5 30294506 30295348 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0070023.1 MGP_NODShiLtJ_G0029130.1 mouse_genomes_project 5 23504468 23505090 - MGP_NODShiLtJ_P0070023 Rpl10 protein_coding protein_coding MGP_NODShiLtJ_T0014901.1 MGP_NODShiLtJ_G0013009.1 mouse_genomes_project 5 77502902 77503494 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008357.1 MGP_NODShiLtJ_G0006770.1 mouse_genomes_project 5 162773117 162775556 + BC030343 lincRNA lincRNA MGP_NODShiLtJ_T0070991.1 MGP_NODShiLtJ_G0029290.1 mouse_genomes_project 5 37871849 38270852 - MGP_NODShiLtJ_P0070991 Sorcs2 protein_coding protein_coding MGP_NODShiLtJ_T0070992.1 MGP_NODShiLtJ_G0029290.1 mouse_genomes_project 5 37916369 38270835 - Sorcs2 protein_coding retained_intron MGP_NODShiLtJ_T0070993.1 MGP_NODShiLtJ_G0029290.1 mouse_genomes_project 5 37920648 38135606 - MGP_NODShiLtJ_P0070993 Sorcs2 protein_coding protein_coding MGP_NODShiLtJ_T0070994.1 MGP_NODShiLtJ_G0029290.1 mouse_genomes_project 5 38011803 38270867 - MGP_NODShiLtJ_P0070994 Sorcs2 protein_coding protein_coding MGP_NODShiLtJ_T0070995.1 MGP_NODShiLtJ_G0029290.1 mouse_genomes_project 5 38012833 38238641 - Sorcs2 protein_coding processed_transcript MGP_NODShiLtJ_T0097813.1 MGP_NODShiLtJ_G0036225.1 mouse_genomes_project 5 47740127 47740509 - pseudogene pseudogene MGP_NODShiLtJ_T0072185.1 MGP_NODShiLtJ_G0029522.1 mouse_genomes_project 5 103461552 103477922 + MGP_NODShiLtJ_P0072185 Alb protein_coding protein_coding MGP_NODShiLtJ_T0072186.1 MGP_NODShiLtJ_G0029522.1 mouse_genomes_project 5 103462974 103463378 + Alb protein_coding processed_transcript MGP_NODShiLtJ_T0072187.1 MGP_NODShiLtJ_G0029522.1 mouse_genomes_project 5 103463355 103475981 + Alb protein_coding processed_transcript MGP_NODShiLtJ_T0014883.1 MGP_NODShiLtJ_G0012991.1 mouse_genomes_project 5 68497105 68497765 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073124.1 MGP_NODShiLtJ_G0029728.1 mouse_genomes_project 5 130228772 130287473 - MGP_NODShiLtJ_P0073124 Ssh1 protein_coding protein_coding MGP_NODShiLtJ_T0073125.1 MGP_NODShiLtJ_G0029728.1 mouse_genomes_project 5 130231442 130287520 - MGP_NODShiLtJ_P0073125 Ssh1 protein_coding protein_coding MGP_NODShiLtJ_T0073126.1 MGP_NODShiLtJ_G0029728.1 mouse_genomes_project 5 130254512 130287568 - MGP_NODShiLtJ_P0073126 Ssh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073127.1 MGP_NODShiLtJ_G0029728.1 mouse_genomes_project 5 130258721 130259875 - MGP_NODShiLtJ_P0073127 Ssh1 protein_coding protein_coding MGP_NODShiLtJ_T0073128.1 MGP_NODShiLtJ_G0029728.1 mouse_genomes_project 5 130259722 130287508 - Ssh1 protein_coding retained_intron MGP_NODShiLtJ_T0010565.1 MGP_NODShiLtJ_G0008698.1 mouse_genomes_project 5 31374104 31374182 + Mir1960 miRNA miRNA MGP_NODShiLtJ_T0001448.1 MGP_NODShiLtJ_G0001366.1 mouse_genomes_project 5 29059533 29063885 - TEC TEC MGP_NODShiLtJ_T0070457.1 MGP_NODShiLtJ_G0029212.1 mouse_genomes_project 5 32336548 32359556 + MGP_NODShiLtJ_P0070457 Trim54 protein_coding protein_coding MGP_NODShiLtJ_T0070458.1 MGP_NODShiLtJ_G0029212.1 mouse_genomes_project 5 32336570 32359558 + MGP_NODShiLtJ_P0070458 Trim54 protein_coding protein_coding MGP_NODShiLtJ_T0004579.1 MGP_NODShiLtJ_G0003965.1 mouse_genomes_project 5 15408264 15412147 - Gm43000 antisense antisense MGP_NODShiLtJ_T0073105.1 MGP_NODShiLtJ_G0029725.1 mouse_genomes_project 5 130060797 130067582 - MGP_NODShiLtJ_P0073105 Tmem119 protein_coding protein_coding MGP_NODShiLtJ_T0073106.1 MGP_NODShiLtJ_G0029725.1 mouse_genomes_project 5 130062706 130067512 - MGP_NODShiLtJ_P0073106 Tmem119 protein_coding protein_coding MGP_NODShiLtJ_T0073515.1 MGP_NODShiLtJ_G0029802.1 mouse_genomes_project 5 137431409 137450007 - MGP_NODShiLtJ_P0073515 Sdsl protein_coding protein_coding MGP_NODShiLtJ_T0073516.1 MGP_NODShiLtJ_G0029802.1 mouse_genomes_project 5 137431425 137450054 - MGP_NODShiLtJ_P0073516 Sdsl protein_coding protein_coding MGP_NODShiLtJ_T0073517.1 MGP_NODShiLtJ_G0029802.1 mouse_genomes_project 5 137437177 137444573 - MGP_NODShiLtJ_P0073517 Sdsl protein_coding protein_coding MGP_NODShiLtJ_T0075528.1 MGP_NODShiLtJ_G0030178.1 mouse_genomes_project 5 166201111 166206972 - MGP_NODShiLtJ_P0075528 Gm3404 protein_coding protein_coding MGP_NODShiLtJ_T0074356.1 MGP_NODShiLtJ_G0029948.1 mouse_genomes_project 5 148422967 148942158 + MGP_NODShiLtJ_P0074356 Caln1 protein_coding protein_coding MGP_NODShiLtJ_T0074359.1 MGP_NODShiLtJ_G0029948.1 mouse_genomes_project 5 148440243 148574685 + MGP_NODShiLtJ_P0074359 Caln1 protein_coding protein_coding MGP_NODShiLtJ_T0074360.1 MGP_NODShiLtJ_G0029948.1 mouse_genomes_project 5 148512105 148698662 + MGP_NODShiLtJ_P0074360 Caln1 protein_coding protein_coding MGP_NODShiLtJ_T0074361.1 MGP_NODShiLtJ_G0029948.1 mouse_genomes_project 5 148512662 148942620 + MGP_NODShiLtJ_P0074361 Caln1 protein_coding protein_coding MGP_NODShiLtJ_T0074362.1 MGP_NODShiLtJ_G0029948.1 mouse_genomes_project 5 148513457 148949379 + MGP_NODShiLtJ_P0074362 Caln1 protein_coding protein_coding MGP_NODShiLtJ_T0008307.1 MGP_NODShiLtJ_G0006735.1 mouse_genomes_project 5 144245624 144246742 - Gm42592 lincRNA lincRNA MGP_NODShiLtJ_T0004745.1 MGP_NODShiLtJ_G0004090.1 mouse_genomes_project 5 136464451 136470270 - Tbx3os1 antisense antisense MGP_NODShiLtJ_T0004746.1 MGP_NODShiLtJ_G0004090.1 mouse_genomes_project 5 136464454 136528218 - Tbx3os1 antisense antisense MGP_NODShiLtJ_T0004747.1 MGP_NODShiLtJ_G0004090.1 mouse_genomes_project 5 136464546 136465079 - Tbx3os1 antisense antisense MGP_NODShiLtJ_T0004748.1 MGP_NODShiLtJ_G0004090.1 mouse_genomes_project 5 136511373 136528295 - Tbx3os1 antisense antisense MGP_NODShiLtJ_T0004749.1 MGP_NODShiLtJ_G0004090.1 mouse_genomes_project 5 136512010 136528506 - Tbx3os1 antisense antisense MGP_NODShiLtJ_T0004750.1 MGP_NODShiLtJ_G0004090.1 mouse_genomes_project 5 136519034 136577291 - Tbx3os1 antisense antisense MGP_NODShiLtJ_T0008208.1 MGP_NODShiLtJ_G0006674.1 mouse_genomes_project 5 126654183 126655790 + Gm42595 lincRNA lincRNA MGP_NODShiLtJ_T0073909.1 MGP_NODShiLtJ_G0029869.1 mouse_genomes_project 5 140814901 140848422 + Bcl7a protein_coding processed_transcript MGP_NODShiLtJ_T0073910.1 MGP_NODShiLtJ_G0029869.1 mouse_genomes_project 5 140815515 140849323 + MGP_NODShiLtJ_P0073910 Bcl7a protein_coding protein_coding MGP_NODShiLtJ_T0073911.1 MGP_NODShiLtJ_G0029869.1 mouse_genomes_project 5 140815567 140833905 + MGP_NODShiLtJ_P0073911 Bcl7a protein_coding protein_coding MGP_NODShiLtJ_T0073318.1 MGP_NODShiLtJ_G0029767.1 mouse_genomes_project 5 131787565 131789902 + MGP_NODShiLtJ_P0073318 Triap1 protein_coding protein_coding MGP_NODShiLtJ_T0008273.1 MGP_NODShiLtJ_G0006717.1 mouse_genomes_project 5 136758718 136763328 - Gm43050 lincRNA lincRNA MGP_NODShiLtJ_T0008274.1 MGP_NODShiLtJ_G0006717.1 mouse_genomes_project 5 136762437 136763199 - Gm43050 lincRNA lincRNA MGP_NODShiLtJ_T0015075.1 MGP_NODShiLtJ_G0013183.1 mouse_genomes_project 5 163799876 163800014 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014996.1 MGP_NODShiLtJ_G0013104.1 mouse_genomes_project 5 123571498 123571974 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074774.1 MGP_NODShiLtJ_G0030018.1 mouse_genomes_project 5 155697320 155713154 - MGP_NODShiLtJ_P0074774 Serpine1 protein_coding protein_coding MGP_NODShiLtJ_T0074775.1 MGP_NODShiLtJ_G0030018.1 mouse_genomes_project 5 155697328 155713149 - MGP_NODShiLtJ_P0074775 Serpine1 protein_coding protein_coding MGP_NODShiLtJ_T0074776.1 MGP_NODShiLtJ_G0030018.1 mouse_genomes_project 5 155709782 155713163 - Serpine1 protein_coding retained_intron MGP_NODShiLtJ_T0075306.1 MGP_NODShiLtJ_G0030126.1 mouse_genomes_project 5 162670657 162694697 + MGP_NODShiLtJ_P0075306 Spdye4b protein_coding protein_coding MGP_NODShiLtJ_T0075307.1 MGP_NODShiLtJ_G0030126.1 mouse_genomes_project 5 162671124 162694038 + MGP_NODShiLtJ_P0075307 Spdye4b protein_coding protein_coding MGP_NODShiLtJ_T0075308.1 MGP_NODShiLtJ_G0030126.1 mouse_genomes_project 5 162680473 162694177 + Spdye4b protein_coding processed_transcript MGP_NODShiLtJ_T0075309.1 MGP_NODShiLtJ_G0030126.1 mouse_genomes_project 5 162680478 162693835 + Spdye4b protein_coding processed_transcript MGP_NODShiLtJ_T0007982.1 MGP_NODShiLtJ_G0006512.1 mouse_genomes_project 5 23078670 23086995 + lincRNA lincRNA MGP_NODShiLtJ_T0007983.1 MGP_NODShiLtJ_G0006512.1 mouse_genomes_project 5 23078677 23367357 + lincRNA lincRNA MGP_NODShiLtJ_T0007984.1 MGP_NODShiLtJ_G0006512.1 mouse_genomes_project 5 23082720 23086190 + lincRNA lincRNA MGP_NODShiLtJ_T0100622.1 MGP_NODShiLtJ_G0039016.1 mouse_genomes_project 5 88232661 88232797 + Gm25756 snoRNA snoRNA MGP_NODShiLtJ_T0001548.1 MGP_NODShiLtJ_G0001464.1 mouse_genomes_project 5 53637140 53639705 + TEC TEC MGP_NODShiLtJ_T0014956.1 MGP_NODShiLtJ_G0013064.1 mouse_genomes_project 5 104897234 104898086 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008236.1 MGP_NODShiLtJ_G0006689.1 mouse_genomes_project 5 128844003 128849449 + Gm42865 lincRNA lincRNA MGP_NODShiLtJ_T0075349.1 MGP_NODShiLtJ_G0030137.1 mouse_genomes_project 5 163066855 163086087 + MGP_NODShiLtJ_P0075349 Fam220a protein_coding protein_coding MGP_NODShiLtJ_T0075350.1 MGP_NODShiLtJ_G0030137.1 mouse_genomes_project 5 163066855 163086087 + MGP_NODShiLtJ_P0075350 Fam220a protein_coding protein_coding MGP_NODShiLtJ_T0075351.1 MGP_NODShiLtJ_G0030137.1 mouse_genomes_project 5 163066857 163086093 + MGP_NODShiLtJ_P0075351 Fam220a protein_coding protein_coding MGP_NODShiLtJ_T0075352.1 MGP_NODShiLtJ_G0030137.1 mouse_genomes_project 5 163066895 163070084 + MGP_NODShiLtJ_P0075352 Fam220a protein_coding protein_coding MGP_NODShiLtJ_T0075353.1 MGP_NODShiLtJ_G0030137.1 mouse_genomes_project 5 163066910 163086087 + MGP_NODShiLtJ_P0075353 Fam220a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075354.1 MGP_NODShiLtJ_G0030137.1 mouse_genomes_project 5 163066910 163086089 + MGP_NODShiLtJ_P0075354 Fam220a protein_coding protein_coding MGP_NODShiLtJ_T0075355.1 MGP_NODShiLtJ_G0030137.1 mouse_genomes_project 5 163066911 163069025 + Fam220a protein_coding retained_intron MGP_NODShiLtJ_T0075356.1 MGP_NODShiLtJ_G0030137.1 mouse_genomes_project 5 163067189 163070079 + Fam220a protein_coding processed_transcript MGP_NODShiLtJ_T0074793.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155974586 155987929 - MGP_NODShiLtJ_P0074793 Srrt protein_coding protein_coding MGP_NODShiLtJ_T0074794.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155974593 155987921 - MGP_NODShiLtJ_P0074794 Srrt protein_coding protein_coding MGP_NODShiLtJ_T0074795.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155974597 155987921 - MGP_NODShiLtJ_P0074795 Srrt protein_coding protein_coding MGP_NODShiLtJ_T0074796.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155974599 155986318 - MGP_NODShiLtJ_P0074796 Srrt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074797.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155974607 155978528 - MGP_NODShiLtJ_P0074797 Srrt protein_coding protein_coding MGP_NODShiLtJ_T0074798.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155974869 155976308 - MGP_NODShiLtJ_P0074798 Srrt protein_coding protein_coding MGP_NODShiLtJ_T0074799.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155974900 155975817 - Srrt protein_coding retained_intron MGP_NODShiLtJ_T0074800.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155975118 155976100 - Srrt protein_coding retained_intron MGP_NODShiLtJ_T0074801.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155975161 155975736 - Srrt protein_coding retained_intron MGP_NODShiLtJ_T0074802.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155975349 155976450 - Srrt protein_coding retained_intron MGP_NODShiLtJ_T0074803.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155976506 155977430 - Srrt protein_coding retained_intron MGP_NODShiLtJ_T0074804.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155976714 155978892 - MGP_NODShiLtJ_P0074804 Srrt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074805.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155976714 155979201 - MGP_NODShiLtJ_P0074805 Srrt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074806.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155977141 155978769 - Srrt protein_coding retained_intron MGP_NODShiLtJ_T0074807.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155978468 155986370 - Srrt protein_coding retained_intron MGP_NODShiLtJ_T0074808.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155978755 155979614 - Srrt protein_coding retained_intron MGP_NODShiLtJ_T0074809.1 MGP_NODShiLtJ_G0030024.1 mouse_genomes_project 5 155981536 155987895 - MGP_NODShiLtJ_P0074809 Srrt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001454.1 MGP_NODShiLtJ_G0001372.1 mouse_genomes_project 5 32098616 32101495 + TEC TEC MGP_NODShiLtJ_T0010605.1 MGP_NODShiLtJ_G0008738.1 mouse_genomes_project 5 132135567 132135627 + Mir7030 miRNA miRNA MGP_NODShiLtJ_T0004821.1 MGP_NODShiLtJ_G0004142.1 mouse_genomes_project 5 160719596 160727344 - Gm16035 antisense antisense MGP_NODShiLtJ_T0001590.1 MGP_NODShiLtJ_G0001505.1 mouse_genomes_project 5 72691420 72692607 - TEC TEC MGP_NODShiLtJ_T0001479.1 MGP_NODShiLtJ_G0001395.1 mouse_genomes_project 5 38516500 38519057 + TEC TEC MGP_NODShiLtJ_T0008253.1 MGP_NODShiLtJ_G0006700.1 mouse_genomes_project 5 132899595 132903274 - Gm13838 lincRNA lincRNA MGP_NODShiLtJ_T0075337.1 MGP_NODShiLtJ_G0030133.1 mouse_genomes_project 5 162863900 162904618 + MGP_NODShiLtJ_P0075337 Grid2ip protein_coding protein_coding MGP_NODShiLtJ_T0075338.1 MGP_NODShiLtJ_G0030133.1 mouse_genomes_project 5 162876988 162908284 + MGP_NODShiLtJ_P0075338 Grid2ip protein_coding protein_coding MGP_NODShiLtJ_T0075339.1 MGP_NODShiLtJ_G0030133.1 mouse_genomes_project 5 162879785 162882545 + Grid2ip protein_coding retained_intron MGP_NODShiLtJ_T0075340.1 MGP_NODShiLtJ_G0030133.1 mouse_genomes_project 5 162882272 162888923 + Grid2ip protein_coding retained_intron MGP_NODShiLtJ_T0073762.1 MGP_NODShiLtJ_G0029850.1 mouse_genomes_project 5 139727245 139740647 + MGP_NODShiLtJ_P0073762 Gpn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073763.1 MGP_NODShiLtJ_G0029850.1 mouse_genomes_project 5 139727820 139740708 + MGP_NODShiLtJ_P0073763 Gpn3 protein_coding protein_coding MGP_NODShiLtJ_T0073764.1 MGP_NODShiLtJ_G0029850.1 mouse_genomes_project 5 139727896 139736544 + Gpn3 protein_coding retained_intron MGP_NODShiLtJ_T0073765.1 MGP_NODShiLtJ_G0029850.1 mouse_genomes_project 5 139729358 139740105 + MGP_NODShiLtJ_P0073765 Gpn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073766.1 MGP_NODShiLtJ_G0029850.1 mouse_genomes_project 5 139739073 139740708 + MGP_NODShiLtJ_P0073766 Gpn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073767.1 MGP_NODShiLtJ_G0029850.1 mouse_genomes_project 5 139739098 139740338 + MGP_NODShiLtJ_P0073767 Gpn3 protein_coding protein_coding MGP_NODShiLtJ_T0010562.1 MGP_NODShiLtJ_G0008695.1 mouse_genomes_project 5 23894445 23894491 - Gm28022 miRNA miRNA MGP_NODShiLtJ_T0071748.1 MGP_NODShiLtJ_G0029420.1 mouse_genomes_project 5 81649560 81720608 + MGP_NODShiLtJ_P0071748 Slain2 protein_coding protein_coding MGP_NODShiLtJ_T0071749.1 MGP_NODShiLtJ_G0029420.1 mouse_genomes_project 5 81649625 81720590 + MGP_NODShiLtJ_P0071749 Slain2 protein_coding protein_coding MGP_NODShiLtJ_T0071750.1 MGP_NODShiLtJ_G0029420.1 mouse_genomes_project 5 81649672 81653742 + Slain2 protein_coding retained_intron MGP_NODShiLtJ_T0071751.1 MGP_NODShiLtJ_G0029420.1 mouse_genomes_project 5 81649924 81693102 + MGP_NODShiLtJ_P0071751 Slain2 protein_coding protein_coding MGP_NODShiLtJ_T0071752.1 MGP_NODShiLtJ_G0029420.1 mouse_genomes_project 5 81684196 81716481 + Slain2 protein_coding retained_intron MGP_NODShiLtJ_T0014964.1 MGP_NODShiLtJ_G0013072.1 mouse_genomes_project 5 112248587 112249203 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071107.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40192968 40203190 + MGP_NODShiLtJ_P0071107 Lyar protein_coding protein_coding MGP_NODShiLtJ_T0071108.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40193005 40206792 + MGP_NODShiLtJ_P0071108 Lyar protein_coding protein_coding MGP_NODShiLtJ_T0071109.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40193006 40200402 + MGP_NODShiLtJ_P0071109 Lyar protein_coding protein_coding MGP_NODShiLtJ_T0071110.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40193013 40203191 + MGP_NODShiLtJ_P0071110 Lyar protein_coding protein_coding MGP_NODShiLtJ_T0071111.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40193015 40203475 + MGP_NODShiLtJ_P0071111 Lyar protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071112.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40193036 40198400 + MGP_NODShiLtJ_P0071112 Lyar protein_coding protein_coding MGP_NODShiLtJ_T0071113.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40193040 40200586 + MGP_NODShiLtJ_P0071113 Lyar protein_coding protein_coding MGP_NODShiLtJ_T0071114.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40195451 40203170 + MGP_NODShiLtJ_P0071114 Lyar protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071115.1 MGP_NODShiLtJ_G0029311.1 mouse_genomes_project 5 40197134 40198947 + Lyar protein_coding retained_intron MGP_NODShiLtJ_T0015085.1 MGP_NODShiLtJ_G0013193.1 mouse_genomes_project 5 165901662 165902485 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014878.1 MGP_NODShiLtJ_G0012986.1 mouse_genomes_project 5 66922264 66922686 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071576.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73805990 73820987 - Apbb2 protein_coding retained_intron MGP_NODShiLtJ_T0071577.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73806012 74139487 - MGP_NODShiLtJ_P0071577 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071578.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73806015 74139410 - MGP_NODShiLtJ_P0071578 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071579.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73806015 74139513 - MGP_NODShiLtJ_P0071579 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071580.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73806127 74139392 - MGP_NODShiLtJ_P0071580 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071581.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73807946 74012579 - Apbb2 protein_coding retained_intron MGP_NODShiLtJ_T0071582.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73809157 73849165 - Apbb2 protein_coding processed_transcript MGP_NODShiLtJ_T0071583.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73809173 74139400 - MGP_NODShiLtJ_P0071583 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071584.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73809173 74139400 - MGP_NODShiLtJ_P0071584 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071585.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73809490 74012578 - MGP_NODShiLtJ_P0071585 Apbb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071586.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73814862 73848963 - Apbb2 protein_coding processed_transcript MGP_NODShiLtJ_T0071587.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73913223 74139412 - Apbb2 protein_coding retained_intron MGP_NODShiLtJ_T0071588.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73913223 74139399 - Apbb2 protein_coding retained_intron MGP_NODShiLtJ_T0071589.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73971445 74139369 - MGP_NODShiLtJ_P0071589 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071590.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73971458 74030022 - MGP_NODShiLtJ_P0071590 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071591.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73971487 74139400 - MGP_NODShiLtJ_P0071591 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071592.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73971691 74139503 - MGP_NODShiLtJ_P0071592 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071593.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73971724 74030029 - MGP_NODShiLtJ_P0071593 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071594.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73971730 74065958 - MGP_NODShiLtJ_P0071594 Apbb2 protein_coding protein_coding MGP_NODShiLtJ_T0071595.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 73981377 74139401 - Apbb2 protein_coding retained_intron MGP_NODShiLtJ_T0071596.1 MGP_NODShiLtJ_G0029392.1 mouse_genomes_project 5 74059766 74139417 - Apbb2 protein_coding retained_intron MGP_NODShiLtJ_T0070459.1 MGP_NODShiLtJ_G0029213.1 mouse_genomes_project 5 32359990 32360757 - MGP_NODShiLtJ_P0070459 Ucn protein_coding protein_coding MGP_NODShiLtJ_T0070460.1 MGP_NODShiLtJ_G0029213.1 mouse_genomes_project 5 32359990 32360757 - MGP_NODShiLtJ_P0070460 Ucn protein_coding protein_coding MGP_NODShiLtJ_T0014807.1 MGP_NODShiLtJ_G0012915.1 mouse_genomes_project 5 30858779 30859158 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072082.1 MGP_NODShiLtJ_G0029490.1 mouse_genomes_project 5 100051868 100068694 - MGP_NODShiLtJ_P0072082 Sult1e1 protein_coding protein_coding MGP_NODShiLtJ_T0014881.1 MGP_NODShiLtJ_G0012989.1 mouse_genomes_project 5 67958106 67958944 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070234.1 MGP_NODShiLtJ_G0029172.1 mouse_genomes_project 5 29245759 29304037 - MGP_NODShiLtJ_P0070234 protein_coding protein_coding MGP_NODShiLtJ_T0070235.1 MGP_NODShiLtJ_G0029172.1 mouse_genomes_project 5 29247389 29255914 - MGP_NODShiLtJ_P0070235 protein_coding protein_coding MGP_NODShiLtJ_T0070236.1 MGP_NODShiLtJ_G0029172.1 mouse_genomes_project 5 29250400 29296124 - MGP_NODShiLtJ_P0070236 protein_coding protein_coding MGP_NODShiLtJ_T0070237.1 MGP_NODShiLtJ_G0029172.1 mouse_genomes_project 5 29250708 29256060 - MGP_NODShiLtJ_P0070237 protein_coding protein_coding MGP_NODShiLtJ_T0070238.1 MGP_NODShiLtJ_G0029172.1 mouse_genomes_project 5 29255136 29256255 - MGP_NODShiLtJ_P0070238 protein_coding protein_coding MGP_NODShiLtJ_T0001748.1 MGP_NODShiLtJ_G0001662.1 mouse_genomes_project 5 135450615 135453032 + TEC TEC MGP_NODShiLtJ_T0004632.1 MGP_NODShiLtJ_G0004007.1 mouse_genomes_project 5 48452071 48457133 + 9630001P10Rik antisense antisense MGP_NODShiLtJ_T0004633.1 MGP_NODShiLtJ_G0004007.1 mouse_genomes_project 5 48452645 48458834 + 9630001P10Rik antisense antisense MGP_NODShiLtJ_T0004634.1 MGP_NODShiLtJ_G0004007.1 mouse_genomes_project 5 48452739 48457456 + 9630001P10Rik antisense antisense MGP_NODShiLtJ_T0072782.1 MGP_NODShiLtJ_G0029658.1 mouse_genomes_project 5 123881813 123910734 + MGP_NODShiLtJ_P0072782 Pcgf3 protein_coding protein_coding MGP_NODShiLtJ_T0072783.1 MGP_NODShiLtJ_G0029658.1 mouse_genomes_project 5 123881813 123929123 + MGP_NODShiLtJ_P0072783 Pcgf3 protein_coding protein_coding MGP_NODShiLtJ_T0072784.1 MGP_NODShiLtJ_G0029658.1 mouse_genomes_project 5 123881894 123907970 + MGP_NODShiLtJ_P0072784 Pcgf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072785.1 MGP_NODShiLtJ_G0029658.1 mouse_genomes_project 5 123894464 123899090 + Pcgf3 protein_coding retained_intron MGP_NODShiLtJ_T0072786.1 MGP_NODShiLtJ_G0029658.1 mouse_genomes_project 5 123908018 123918443 + Pcgf3 protein_coding retained_intron MGP_NODShiLtJ_T0015074.1 MGP_NODShiLtJ_G0013182.1 mouse_genomes_project 5 163634460 163635417 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099392.1 MGP_NODShiLtJ_G0037786.1 mouse_genomes_project 5 134925505 134925612 - Gm26411 snRNA snRNA MGP_NODShiLtJ_T0001823.1 MGP_NODShiLtJ_G0001736.1 mouse_genomes_project 5 150372062 150373392 - TEC TEC MGP_NODShiLtJ_T0014734.1 MGP_NODShiLtJ_G0012842.1 mouse_genomes_project 5 7049982 7050224 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001414.1 MGP_NODShiLtJ_G0001333.1 mouse_genomes_project 5 10512818 10521034 - TEC TEC MGP_NODShiLtJ_T0001580.1 MGP_NODShiLtJ_G0001496.1 mouse_genomes_project 5 63567448 63570932 + TEC TEC MGP_NODShiLtJ_T0008191.1 MGP_NODShiLtJ_G0006665.1 mouse_genomes_project 5 122939640 122967165 - Gm26692 lincRNA lincRNA MGP_NODShiLtJ_T0014828.1 MGP_NODShiLtJ_G0012936.1 mouse_genomes_project 5 35764992 35765449 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075256.1 MGP_NODShiLtJ_G0030117.1 mouse_genomes_project 5 161982779 162033854 - MGP_NODShiLtJ_P0075256 Mmd2 protein_coding protein_coding MGP_NODShiLtJ_T0075257.1 MGP_NODShiLtJ_G0030117.1 mouse_genomes_project 5 162001542 162003418 - Mmd2 protein_coding retained_intron MGP_NODShiLtJ_T0075258.1 MGP_NODShiLtJ_G0030117.1 mouse_genomes_project 5 162002844 162033854 - Mmd2 protein_coding processed_transcript MGP_NODShiLtJ_T0014939.1 MGP_NODShiLtJ_G0013047.1 mouse_genomes_project 5 100082433 100082842 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015091.1 MGP_NODShiLtJ_G0013199.1 mouse_genomes_project 5 167460605 167461071 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008245.1 MGP_NODShiLtJ_G0006694.1 mouse_genomes_project 5 131796543 131800936 + Gm42903 lincRNA lincRNA MGP_NODShiLtJ_T0071662.1 MGP_NODShiLtJ_G0029403.1 mouse_genomes_project 5 75678204 75823764 + MGP_NODShiLtJ_P0071662 Grxcr1 protein_coding protein_coding MGP_NODShiLtJ_T0070258.1 MGP_NODShiLtJ_G0029176.1 mouse_genomes_project 5 30308862 30476185 - MGP_NODShiLtJ_P0070258 Lmbr1 protein_coding protein_coding MGP_NODShiLtJ_T0070259.1 MGP_NODShiLtJ_G0029176.1 mouse_genomes_project 5 30308874 30476191 - MGP_NODShiLtJ_P0070259 Lmbr1 protein_coding protein_coding MGP_NODShiLtJ_T0070260.1 MGP_NODShiLtJ_G0029176.1 mouse_genomes_project 5 30311179 30476103 - MGP_NODShiLtJ_P0070260 Lmbr1 protein_coding protein_coding MGP_NODShiLtJ_T0070261.1 MGP_NODShiLtJ_G0029176.1 mouse_genomes_project 5 30311433 30476185 - MGP_NODShiLtJ_P0070261 Lmbr1 protein_coding protein_coding MGP_NODShiLtJ_T0070262.1 MGP_NODShiLtJ_G0029176.1 mouse_genomes_project 5 30311901 30476131 - MGP_NODShiLtJ_P0070262 Lmbr1 protein_coding protein_coding MGP_NODShiLtJ_T0070263.1 MGP_NODShiLtJ_G0029176.1 mouse_genomes_project 5 30314078 30380984 - MGP_NODShiLtJ_P0070263 Lmbr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070264.1 MGP_NODShiLtJ_G0029176.1 mouse_genomes_project 5 30341107 30459396 - Lmbr1 protein_coding processed_transcript MGP_NODShiLtJ_T0014774.1 MGP_NODShiLtJ_G0012882.1 mouse_genomes_project 5 23262936 23263309 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010599.1 MGP_NODShiLtJ_G0008732.1 mouse_genomes_project 5 127024618 127024727 + Mir701 miRNA miRNA MGP_NODShiLtJ_T0008381.1 MGP_NODShiLtJ_G0006791.1 mouse_genomes_project 5 169348135 169353308 - 5930430L01Rik lincRNA lincRNA MGP_NODShiLtJ_T0008382.1 MGP_NODShiLtJ_G0006791.1 mouse_genomes_project 5 169349161 169353300 - 5930430L01Rik lincRNA lincRNA MGP_NODShiLtJ_T0070664.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34416989 34444631 + MGP_NODShiLtJ_P0070664 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070665.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34416994 34453723 + MGP_NODShiLtJ_P0070665 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070666.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417001 34421299 + MGP_NODShiLtJ_P0070666 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070667.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417009 34519527 + MGP_NODShiLtJ_P0070667 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070668.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417022 34559828 + MGP_NODShiLtJ_P0070668 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070669.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417048 34465434 + Depdc5 protein_coding retained_intron MGP_NODShiLtJ_T0070670.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417058 34445250 + Depdc5 protein_coding retained_intron MGP_NODShiLtJ_T0070671.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417058 34483179 + MGP_NODShiLtJ_P0070671 Depdc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070672.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417060 34436280 + MGP_NODShiLtJ_P0070672 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070673.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417065 34519525 + Depdc5 protein_coding processed_transcript MGP_NODShiLtJ_T0070674.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417419 34559830 + MGP_NODShiLtJ_P0070674 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070675.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417443 34421311 + MGP_NODShiLtJ_P0070675 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070676.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34417875 34557258 + MGP_NODShiLtJ_P0070676 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070677.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34462963 34477201 + MGP_NODShiLtJ_P0070677 Depdc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070678.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34483204 34557251 + MGP_NODShiLtJ_P0070678 Depdc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070679.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34483302 34557258 + MGP_NODShiLtJ_P0070679 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070680.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34503847 34505062 + Depdc5 protein_coding retained_intron MGP_NODShiLtJ_T0070681.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34504142 34527950 + MGP_NODShiLtJ_P0070681 Depdc5 protein_coding protein_coding MGP_NODShiLtJ_T0070682.1 MGP_NODShiLtJ_G0029243.1 mouse_genomes_project 5 34530945 34538089 + Depdc5 protein_coding retained_intron MGP_NODShiLtJ_T0072999.1 MGP_NODShiLtJ_G0029703.1 mouse_genomes_project 5 128370657 128385254 + MGP_NODShiLtJ_P0072999 Crybb1 protein_coding protein_coding MGP_NODShiLtJ_T0073000.1 MGP_NODShiLtJ_G0029703.1 mouse_genomes_project 5 128370687 128385126 + MGP_NODShiLtJ_P0073000 Crybb1 protein_coding protein_coding MGP_NODShiLtJ_T0073001.1 MGP_NODShiLtJ_G0029703.1 mouse_genomes_project 5 128370716 128385171 + MGP_NODShiLtJ_P0073001 Crybb1 protein_coding protein_coding MGP_NODShiLtJ_T0014852.1 MGP_NODShiLtJ_G0012960.1 mouse_genomes_project 5 52051460 52052825 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008264.1 MGP_NODShiLtJ_G0006709.1 mouse_genomes_project 5 135822778 135831620 + 4930413E15Rik lincRNA lincRNA MGP_NODShiLtJ_T0015095.1 MGP_NODShiLtJ_G0013203.1 mouse_genomes_project 5 168078912 168079387 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100628.1 MGP_NODShiLtJ_G0039022.1 mouse_genomes_project 5 105351173 105351317 + Gm25290 snoRNA snoRNA MGP_NODShiLtJ_T0010566.1 MGP_NODShiLtJ_G0008699.1 mouse_genomes_project 5 31831024 31831104 + Mir5625 miRNA miRNA MGP_NODShiLtJ_T0075180.1 MGP_NODShiLtJ_G0030100.1 mouse_genomes_project 5 159558412 159562637 - MGP_NODShiLtJ_P0075180 Mrm2 protein_coding protein_coding MGP_NODShiLtJ_T0098493.1 MGP_NODShiLtJ_G0036888.1 mouse_genomes_project 5 141014396 141020035 + Gm15751 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0070064.1 MGP_NODShiLtJ_G0029136.1 mouse_genomes_project 5 24605442 24614778 - Fam126a protein_coding processed_transcript MGP_NODShiLtJ_T0070065.1 MGP_NODShiLtJ_G0029136.1 mouse_genomes_project 5 24605443 24742987 - MGP_NODShiLtJ_P0070065 Fam126a protein_coding protein_coding MGP_NODShiLtJ_T0070066.1 MGP_NODShiLtJ_G0029136.1 mouse_genomes_project 5 24660291 24706843 - MGP_NODShiLtJ_P0070066 Fam126a protein_coding protein_coding MGP_NODShiLtJ_T0070067.1 MGP_NODShiLtJ_G0029136.1 mouse_genomes_project 5 24687917 24691091 - Fam126a protein_coding retained_intron MGP_NODShiLtJ_T0070068.1 MGP_NODShiLtJ_G0029136.1 mouse_genomes_project 5 24694901 24742980 - Fam126a protein_coding processed_transcript MGP_NODShiLtJ_T0004583.1 MGP_NODShiLtJ_G0003968.1 mouse_genomes_project 5 22410994 22463850 + Gm10475 antisense antisense MGP_NODShiLtJ_T0014879.1 MGP_NODShiLtJ_G0012987.1 mouse_genomes_project 5 67054328 67056121 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074468.1 MGP_NODShiLtJ_G0029961.1 mouse_genomes_project 5 152918881 152929295 + Rfc2 protein_coding processed_transcript MGP_NODShiLtJ_T0074469.1 MGP_NODShiLtJ_G0029961.1 mouse_genomes_project 5 152920204 152939903 + MGP_NODShiLtJ_P0074469 Rfc2 protein_coding protein_coding MGP_NODShiLtJ_T0074470.1 MGP_NODShiLtJ_G0029961.1 mouse_genomes_project 5 152920271 152929732 + Rfc2 protein_coding retained_intron MGP_NODShiLtJ_T0074471.1 MGP_NODShiLtJ_G0029961.1 mouse_genomes_project 5 152929617 152936053 + MGP_NODShiLtJ_P0074471 Rfc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074472.1 MGP_NODShiLtJ_G0029961.1 mouse_genomes_project 5 152930802 152933410 + Rfc2 protein_coding retained_intron MGP_NODShiLtJ_T0074473.1 MGP_NODShiLtJ_G0029961.1 mouse_genomes_project 5 152932216 152936426 + Rfc2 protein_coding retained_intron MGP_NODShiLtJ_T0100648.1 MGP_NODShiLtJ_G0039042.1 mouse_genomes_project 5 169534034 169534132 + Gm23362 snoRNA snoRNA MGP_NODShiLtJ_T0008372.1 MGP_NODShiLtJ_G0006783.1 mouse_genomes_project 5 168177704 168189237 - Gm15721 lincRNA lincRNA MGP_NODShiLtJ_T0008089.1 MGP_NODShiLtJ_G0006586.1 mouse_genomes_project 5 81198189 81199089 - AU023070 lincRNA lincRNA MGP_NODShiLtJ_T0070570.1 MGP_NODShiLtJ_G0029227.1 mouse_genomes_project 5 32749696 32770659 + MGP_NODShiLtJ_P0070570 protein_coding protein_coding MGP_NODShiLtJ_T0070571.1 MGP_NODShiLtJ_G0029227.1 mouse_genomes_project 5 32749700 32785756 + MGP_NODShiLtJ_P0070571 protein_coding protein_coding MGP_NODShiLtJ_T0070572.1 MGP_NODShiLtJ_G0029227.1 mouse_genomes_project 5 32749715 32777458 + MGP_NODShiLtJ_P0070572 protein_coding protein_coding MGP_NODShiLtJ_T0070573.1 MGP_NODShiLtJ_G0029227.1 mouse_genomes_project 5 32749781 32785751 + MGP_NODShiLtJ_P0070573 protein_coding protein_coding MGP_NODShiLtJ_T0070574.1 MGP_NODShiLtJ_G0029227.1 mouse_genomes_project 5 32768775 32776845 + MGP_NODShiLtJ_P0070574 protein_coding protein_coding MGP_NODShiLtJ_T0099332.1 MGP_NODShiLtJ_G0037726.1 mouse_genomes_project 5 6849869 6850036 + Gm24666 snRNA snRNA MGP_NODShiLtJ_T0072509.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115327342 115343081 - MGP_NODShiLtJ_P0072509 Fam175a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072510.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115327342 115343106 - MGP_NODShiLtJ_P0072510 Fam175a protein_coding protein_coding MGP_NODShiLtJ_T0072511.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115327342 115343084 - MGP_NODShiLtJ_P0072511 Fam175a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072512.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115327342 115343081 - MGP_NODShiLtJ_P0072512 Fam175a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072513.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115327353 115343081 - MGP_NODShiLtJ_P0072513 Fam175a protein_coding protein_coding MGP_NODShiLtJ_T0072514.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115328483 115329473 - Fam175a protein_coding retained_intron MGP_NODShiLtJ_T0072515.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115331921 115343082 - MGP_NODShiLtJ_P0072515 Fam175a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072516.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115339880 115343088 - Fam175a protein_coding retained_intron MGP_NODShiLtJ_T0072517.1 MGP_NODShiLtJ_G0029594.1 mouse_genomes_project 5 115340500 115343081 - Fam175a protein_coding retained_intron MGP_NODShiLtJ_T0004646.1 MGP_NODShiLtJ_G0004019.1 mouse_genomes_project 5 74147234 74207605 - Uchl1os antisense antisense MGP_NODShiLtJ_T0004647.1 MGP_NODShiLtJ_G0004019.1 mouse_genomes_project 5 74184093 74207140 - Uchl1os antisense antisense MGP_NODShiLtJ_T0008317.1 MGP_NODShiLtJ_G0006742.1 mouse_genomes_project 5 144942408 144956070 + 4930572K03Rik lincRNA lincRNA MGP_NODShiLtJ_T0008318.1 MGP_NODShiLtJ_G0006742.1 mouse_genomes_project 5 144942413 144956084 + 4930572K03Rik lincRNA lincRNA MGP_NODShiLtJ_T0074369.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149588447 150728769 - Auts2 protein_coding processed_transcript MGP_NODShiLtJ_T0074370.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149590009 150728082 - Auts2 protein_coding processed_transcript MGP_NODShiLtJ_T0074371.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149591290 150229978 - Auts2 protein_coding processed_transcript MGP_NODShiLtJ_T0074372.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149591522 149630271 - MGP_NODShiLtJ_P0074372 Auts2 protein_coding protein_coding MGP_NODShiLtJ_T0074373.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149591624 150727297 - Auts2 protein_coding processed_transcript MGP_NODShiLtJ_T0074374.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149591644 149683710 - MGP_NODShiLtJ_P0074374 Auts2 protein_coding protein_coding MGP_NODShiLtJ_T0074375.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149592537 149612222 - MGP_NODShiLtJ_P0074375 Auts2 protein_coding protein_coding MGP_NODShiLtJ_T0074376.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149597667 149607977 - Auts2 protein_coding processed_transcript MGP_NODShiLtJ_T0074377.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149621666 149623445 - Auts2 protein_coding retained_intron MGP_NODShiLtJ_T0074378.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149628573 149686030 - Auts2 protein_coding retained_intron MGP_NODShiLtJ_T0074379.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149629988 149682461 - Auts2 protein_coding processed_transcript MGP_NODShiLtJ_T0074380.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149682375 149686065 - Auts2 protein_coding retained_intron MGP_NODShiLtJ_T0074381.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 149936968 150727829 - Auts2 protein_coding retained_intron MGP_NODShiLtJ_T0074382.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 150204941 150208551 - Auts2 protein_coding retained_intron MGP_NODShiLtJ_T0074383.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 150205903 150727452 - Auts2 protein_coding processed_transcript MGP_NODShiLtJ_T0074384.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 150210832 150230050 - MGP_NODShiLtJ_P0074384 Auts2 protein_coding protein_coding MGP_NODShiLtJ_T0074385.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 150210913 150624936 - MGP_NODShiLtJ_P0074385 Auts2 protein_coding protein_coding MGP_NODShiLtJ_T0074386.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 150229370 150728223 - Auts2 protein_coding retained_intron MGP_NODShiLtJ_T0074387.1 MGP_NODShiLtJ_G0029952.1 mouse_genomes_project 5 150726940 150727249 - MGP_NODShiLtJ_P0074387 Auts2 protein_coding protein_coding MGP_NODShiLtJ_T0074751.1 MGP_NODShiLtJ_G0030013.1 mouse_genomes_project 5 155583827 155594157 + MGP_NODShiLtJ_P0074751 Cldn15 protein_coding protein_coding MGP_NODShiLtJ_T0074752.1 MGP_NODShiLtJ_G0030013.1 mouse_genomes_project 5 155585085 155594143 + MGP_NODShiLtJ_P0074752 Cldn15 protein_coding protein_coding MGP_NODShiLtJ_T0074753.1 MGP_NODShiLtJ_G0030013.1 mouse_genomes_project 5 155592254 155593312 + Cldn15 protein_coding processed_transcript MGP_NODShiLtJ_T0098412.1 MGP_NODShiLtJ_G0036817.1 mouse_genomes_project 5 147726128 147727468 + Gm15903 sense_intronic sense_intronic MGP_NODShiLtJ_T0098413.1 MGP_NODShiLtJ_G0036817.1 mouse_genomes_project 5 147727254 147730757 + Gm15903 sense_intronic sense_intronic MGP_NODShiLtJ_T0101144.1 MGP_NODShiLtJ_G0039476.1 mouse_genomes_project 5 34734014 34735176 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101145.1 MGP_NODShiLtJ_G0039476.1 mouse_genomes_project 5 34734701 34735488 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0070781.1 MGP_NODShiLtJ_G0029259.1 mouse_genomes_project 5 35593254 35624431 - MGP_NODShiLtJ_P0070781 Nelfa protein_coding protein_coding MGP_NODShiLtJ_T0070782.1 MGP_NODShiLtJ_G0029259.1 mouse_genomes_project 5 35606311 35624268 - Nelfa protein_coding retained_intron MGP_NODShiLtJ_T0014770.1 MGP_NODShiLtJ_G0012878.1 mouse_genomes_project 5 22798961 22799333 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0073329.1 MGP_NODShiLtJ_G0029770.1 mouse_genomes_project 5 131934188 131945847 + MGP_NODShiLtJ_P0073329 Pla2g1b protein_coding protein_coding MGP_NODShiLtJ_T0073330.1 MGP_NODShiLtJ_G0029770.1 mouse_genomes_project 5 131934192 131945835 + Pla2g1b protein_coding processed_transcript MGP_NODShiLtJ_T0073331.1 MGP_NODShiLtJ_G0029770.1 mouse_genomes_project 5 131934192 131945861 + MGP_NODShiLtJ_P0073331 Pla2g1b protein_coding protein_coding MGP_NODShiLtJ_T0073332.1 MGP_NODShiLtJ_G0029770.1 mouse_genomes_project 5 131934198 131945700 + MGP_NODShiLtJ_P0073332 Pla2g1b protein_coding protein_coding MGP_NODShiLtJ_T0073333.1 MGP_NODShiLtJ_G0029770.1 mouse_genomes_project 5 131934198 131941247 + MGP_NODShiLtJ_P0073333 Pla2g1b protein_coding protein_coding MGP_NODShiLtJ_T0074097.1 MGP_NODShiLtJ_G0029897.1 mouse_genomes_project 5 142077099 142085065 + MGP_NODShiLtJ_P0074097 Snrnp35 protein_coding protein_coding MGP_NODShiLtJ_T0074098.1 MGP_NODShiLtJ_G0029897.1 mouse_genomes_project 5 142077167 142084431 + MGP_NODShiLtJ_P0074098 Snrnp35 protein_coding protein_coding MGP_NODShiLtJ_T0074099.1 MGP_NODShiLtJ_G0029897.1 mouse_genomes_project 5 142077423 142085048 + MGP_NODShiLtJ_P0074099 Snrnp35 protein_coding protein_coding MGP_NODShiLtJ_T0075012.1 MGP_NODShiLtJ_G0030067.1 mouse_genomes_project 5 157211572 157215911 - MGP_NODShiLtJ_P0075012 BC037034 protein_coding protein_coding MGP_NODShiLtJ_T0075013.1 MGP_NODShiLtJ_G0030067.1 mouse_genomes_project 5 157211574 157215257 - MGP_NODShiLtJ_P0075013 BC037034 protein_coding protein_coding MGP_NODShiLtJ_T0075014.1 MGP_NODShiLtJ_G0030067.1 mouse_genomes_project 5 157211575 157215907 - MGP_NODShiLtJ_P0075014 BC037034 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075015.1 MGP_NODShiLtJ_G0030067.1 mouse_genomes_project 5 157211576 157215950 - BC037034 protein_coding retained_intron MGP_NODShiLtJ_T0075016.1 MGP_NODShiLtJ_G0030067.1 mouse_genomes_project 5 157212021 157212862 - MGP_NODShiLtJ_P0075016 BC037034 protein_coding protein_coding MGP_NODShiLtJ_T0075017.1 MGP_NODShiLtJ_G0030067.1 mouse_genomes_project 5 157213486 157214111 - BC037034 protein_coding retained_intron MGP_NODShiLtJ_T0075018.1 MGP_NODShiLtJ_G0030067.1 mouse_genomes_project 5 157214169 157215055 - BC037034 protein_coding retained_intron MGP_NODShiLtJ_T0010600.1 MGP_NODShiLtJ_G0008733.1 mouse_genomes_project 5 129543622 129543675 - Mir7229 miRNA miRNA MGP_NODShiLtJ_T0004839.1 MGP_NODShiLtJ_G0004155.1 mouse_genomes_project 5 170553613 170569905 - Gm42557 antisense antisense MGP_NODShiLtJ_T0069948.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21636424 21708533 + Gsap protein_coding retained_intron MGP_NODShiLtJ_T0069949.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21636436 21743325 + MGP_NODShiLtJ_P0069949 Gsap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069950.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21636458 21743347 + MGP_NODShiLtJ_P0069950 Gsap protein_coding protein_coding MGP_NODShiLtJ_T0069951.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21636468 21641964 + Gsap protein_coding processed_transcript MGP_NODShiLtJ_T0069952.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21636481 21700592 + MGP_NODShiLtJ_P0069952 Gsap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069953.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21636482 21740270 + MGP_NODShiLtJ_P0069953 Gsap protein_coding protein_coding MGP_NODShiLtJ_T0069954.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21636482 21740270 + MGP_NODShiLtJ_P0069954 Gsap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069955.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21699964 21707094 + Gsap protein_coding retained_intron MGP_NODShiLtJ_T0069956.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21741416 21766301 + MGP_NODShiLtJ_P0069956 Gsap protein_coding protein_coding MGP_NODShiLtJ_T0069957.1 MGP_NODShiLtJ_G0029115.1 mouse_genomes_project 5 21741496 21766302 + Gsap protein_coding processed_transcript MGP_NODShiLtJ_T0071910.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85714282 85716116 + MGP_NODShiLtJ_P0071910 C530008M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0071911.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85715443 85921679 + MGP_NODShiLtJ_P0071911 C530008M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0071912.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85715445 85716868 + C530008M17Rik protein_coding processed_transcript MGP_NODShiLtJ_T0071913.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85715481 85857801 + C530008M17Rik protein_coding processed_transcript MGP_NODShiLtJ_T0071914.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85819799 85960085 + MGP_NODShiLtJ_P0071914 C530008M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0071915.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85888869 85923387 + MGP_NODShiLtJ_P0071915 C530008M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0071916.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85921396 85960300 + MGP_NODShiLtJ_P0071916 C530008M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0071917.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85921396 85960311 + MGP_NODShiLtJ_P0071917 C530008M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0071918.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85921416 85923389 + MGP_NODShiLtJ_P0071918 C530008M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0071919.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85942295 85953238 + C530008M17Rik protein_coding retained_intron MGP_NODShiLtJ_T0071920.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85952847 85955156 + MGP_NODShiLtJ_P0071920 C530008M17Rik protein_coding protein_coding MGP_NODShiLtJ_T0071921.1 MGP_NODShiLtJ_G0029450.1 mouse_genomes_project 5 85955926 85957429 + C530008M17Rik protein_coding processed_transcript MGP_NODShiLtJ_T0008280.1 MGP_NODShiLtJ_G0006722.1 mouse_genomes_project 5 140444313 140672585 - lincRNA lincRNA MGP_NODShiLtJ_T0014728.1 MGP_NODShiLtJ_G0012836.1 mouse_genomes_project 5 4042005 4042572 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070405.1 MGP_NODShiLtJ_G0029204.1 mouse_genomes_project 5 32136992 32149930 - MGP_NODShiLtJ_P0070405 Cgref1 protein_coding protein_coding MGP_NODShiLtJ_T0070406.1 MGP_NODShiLtJ_G0029204.1 mouse_genomes_project 5 32139067 32149745 - Cgref1 protein_coding retained_intron MGP_NODShiLtJ_T0001842.1 MGP_NODShiLtJ_G0001754.1 mouse_genomes_project 5 153915079 153916720 - TEC TEC MGP_NODShiLtJ_T0071126.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40338616 40476093 - MGP_NODShiLtJ_P0071126 Slc2a9 protein_coding protein_coding MGP_NODShiLtJ_T0071127.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40338616 40472054 - MGP_NODShiLtJ_P0071127 Slc2a9 protein_coding protein_coding MGP_NODShiLtJ_T0071128.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40338617 40486646 - MGP_NODShiLtJ_P0071128 Slc2a9 protein_coding protein_coding MGP_NODShiLtJ_T0071129.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40338649 40498763 - MGP_NODShiLtJ_P0071129 Slc2a9 protein_coding protein_coding MGP_NODShiLtJ_T0071130.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40338982 40500142 - MGP_NODShiLtJ_P0071130 Slc2a9 protein_coding protein_coding MGP_NODShiLtJ_T0071131.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40338982 40471906 - MGP_NODShiLtJ_P0071131 Slc2a9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071132.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40340426 40471879 - MGP_NODShiLtJ_P0071132 Slc2a9 protein_coding protein_coding MGP_NODShiLtJ_T0071133.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40371085 40471930 - MGP_NODShiLtJ_P0071133 Slc2a9 protein_coding protein_coding MGP_NODShiLtJ_T0071134.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40406167 40431523 - Slc2a9 protein_coding processed_transcript MGP_NODShiLtJ_T0071135.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40431343 40498690 - MGP_NODShiLtJ_P0071135 Slc2a9 protein_coding protein_coding MGP_NODShiLtJ_T0071136.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40467573 40498772 - Slc2a9 protein_coding processed_transcript MGP_NODShiLtJ_T0071137.1 MGP_NODShiLtJ_G0029315.1 mouse_genomes_project 5 40475699 40486619 - Slc2a9 protein_coding retained_intron MGP_NODShiLtJ_T0001816.1 MGP_NODShiLtJ_G0001729.1 mouse_genomes_project 5 150079144 150079892 - TEC TEC MGP_NODShiLtJ_T0073411.1 MGP_NODShiLtJ_G0029781.1 mouse_genomes_project 5 133015756 133034362 - MGP_NODShiLtJ_P0073411 Hspb8 protein_coding protein_coding MGP_NODShiLtJ_T0073412.1 MGP_NODShiLtJ_G0029781.1 mouse_genomes_project 5 133016205 133024914 - Hspb8 protein_coding processed_transcript MGP_NODShiLtJ_T0015090.1 MGP_NODShiLtJ_G0013198.1 mouse_genomes_project 5 167209419 167209911 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0069884.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330659 15856432 + MGP_NODShiLtJ_P0069884 protein_coding protein_coding MGP_NODShiLtJ_T0069885.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330756 15856425 + MGP_NODShiLtJ_P0069885 protein_coding protein_coding MGP_NODShiLtJ_T0069886.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330756 15851362 + MGP_NODShiLtJ_P0069886 protein_coding protein_coding MGP_NODShiLtJ_T0069887.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330756 15851380 + MGP_NODShiLtJ_P0069887 protein_coding protein_coding MGP_NODShiLtJ_T0069888.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330756 15851380 + MGP_NODShiLtJ_P0069888 protein_coding protein_coding MGP_NODShiLtJ_T0069889.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330756 15851380 + MGP_NODShiLtJ_P0069889 protein_coding protein_coding MGP_NODShiLtJ_T0069890.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330797 15851038 + MGP_NODShiLtJ_P0069890 protein_coding protein_coding MGP_NODShiLtJ_T0069891.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330879 15515102 + MGP_NODShiLtJ_P0069891 protein_coding protein_coding MGP_NODShiLtJ_T0069892.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15330982 15852575 + MGP_NODShiLtJ_P0069892 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0069893.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15442951 15721968 + protein_coding retained_intron MGP_NODShiLtJ_T0069894.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15786097 15789676 + protein_coding retained_intron MGP_NODShiLtJ_T0069895.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15786257 15814914 + protein_coding retained_intron MGP_NODShiLtJ_T0069896.1 MGP_NODShiLtJ_G0029104.1 mouse_genomes_project 5 15842213 15843145 + protein_coding retained_intron MGP_NODShiLtJ_T0070997.1 MGP_NODShiLtJ_G0029292.1 mouse_genomes_project 5 38345082 38354088 + MGP_NODShiLtJ_P0070997 Grpel1 protein_coding protein_coding MGP_NODShiLtJ_T0071698.1 MGP_NODShiLtJ_G0029412.1 mouse_genomes_project 5 80283043 80799463 + MGP_NODShiLtJ_P0071698 Gabrb1 protein_coding protein_coding MGP_NODShiLtJ_T0071699.1 MGP_NODShiLtJ_G0029412.1 mouse_genomes_project 5 80329285 80833847 + MGP_NODShiLtJ_P0071699 Gabrb1 protein_coding protein_coding MGP_NODShiLtJ_T0073579.1 MGP_NODShiLtJ_G0029821.1 mouse_genomes_project 5 138078537 138151754 - MGP_NODShiLtJ_P0073579 Rph3a protein_coding protein_coding MGP_NODShiLtJ_T0073580.1 MGP_NODShiLtJ_G0029821.1 mouse_genomes_project 5 138078537 138151212 - MGP_NODShiLtJ_P0073580 Rph3a protein_coding protein_coding MGP_NODShiLtJ_T0073581.1 MGP_NODShiLtJ_G0029821.1 mouse_genomes_project 5 138079879 138150217 - MGP_NODShiLtJ_P0073581 Rph3a protein_coding protein_coding MGP_NODShiLtJ_T0073582.1 MGP_NODShiLtJ_G0029821.1 mouse_genomes_project 5 138111439 138151766 - MGP_NODShiLtJ_P0073582 Rph3a protein_coding protein_coding MGP_NODShiLtJ_T0004669.1 MGP_NODShiLtJ_G0004038.1 mouse_genomes_project 5 99000435 99031937 + Gm16579 antisense antisense MGP_NODShiLtJ_T0001582.1 MGP_NODShiLtJ_G0001498.1 mouse_genomes_project 5 69591903 69592947 - TEC TEC MGP_NODShiLtJ_T0001510.1 MGP_NODShiLtJ_G0001426.1 mouse_genomes_project 5 48341797 48343819 + TEC TEC MGP_NODShiLtJ_T0014976.1 MGP_NODShiLtJ_G0013084.1 mouse_genomes_project 5 117608627 117608882 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001497.1 MGP_NODShiLtJ_G0001413.1 mouse_genomes_project 5 46801057 46802748 + TEC TEC MGP_NODShiLtJ_T0018035.1 MGP_NODShiLtJ_G0015479.1 mouse_genomes_project 5 142202498 142205825 + Tctn2 processed_transcript retained_intron MGP_NODShiLtJ_T0018036.1 MGP_NODShiLtJ_G0015479.1 mouse_genomes_project 5 142202498 142233889 + Tctn2 processed_transcript processed_transcript MGP_NODShiLtJ_T0018037.1 MGP_NODShiLtJ_G0015479.1 mouse_genomes_project 5 142202533 142209397 + Tctn2 processed_transcript retained_intron MGP_NODShiLtJ_T0018038.1 MGP_NODShiLtJ_G0015479.1 mouse_genomes_project 5 142202536 142207077 + Tctn2 processed_transcript retained_intron MGP_NODShiLtJ_T0018039.1 MGP_NODShiLtJ_G0015479.1 mouse_genomes_project 5 142202541 142224686 + Tctn2 processed_transcript retained_intron MGP_NODShiLtJ_T0018040.1 MGP_NODShiLtJ_G0015479.1 mouse_genomes_project 5 142202546 142233609 + Tctn2 processed_transcript processed_transcript MGP_NODShiLtJ_T0075025.1 MGP_NODShiLtJ_G0030070.1 mouse_genomes_project 5 157225566 157231917 - MGP_NODShiLtJ_P0075025 Gpc2 protein_coding protein_coding MGP_NODShiLtJ_T0075026.1 MGP_NODShiLtJ_G0030070.1 mouse_genomes_project 5 157225568 157231897 - Gpc2 protein_coding retained_intron MGP_NODShiLtJ_T0075027.1 MGP_NODShiLtJ_G0030070.1 mouse_genomes_project 5 157225568 157231874 - Gpc2 protein_coding retained_intron MGP_NODShiLtJ_T0075028.1 MGP_NODShiLtJ_G0030070.1 mouse_genomes_project 5 157225568 157231894 - MGP_NODShiLtJ_P0075028 Gpc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075029.1 MGP_NODShiLtJ_G0030070.1 mouse_genomes_project 5 157225571 157231877 - MGP_NODShiLtJ_P0075029 Gpc2 protein_coding protein_coding MGP_NODShiLtJ_T0075030.1 MGP_NODShiLtJ_G0030070.1 mouse_genomes_project 5 157227439 157230149 - Gpc2 protein_coding retained_intron MGP_NODShiLtJ_T0075031.1 MGP_NODShiLtJ_G0030070.1 mouse_genomes_project 5 157228552 157231875 - Gpc2 protein_coding processed_transcript MGP_NODShiLtJ_T0100616.1 MGP_NODShiLtJ_G0039010.1 mouse_genomes_project 5 71268814 71268946 - Gm25608 snoRNA snoRNA MGP_NODShiLtJ_T0074399.1 MGP_NODShiLtJ_G0029956.1 mouse_genomes_project 5 152528840 152539501 - MGP_NODShiLtJ_P0074399 Ncf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074400.1 MGP_NODShiLtJ_G0029956.1 mouse_genomes_project 5 152529047 152539501 - MGP_NODShiLtJ_P0074400 Ncf1 protein_coding protein_coding MGP_NODShiLtJ_T0074401.1 MGP_NODShiLtJ_G0029956.1 mouse_genomes_project 5 152529047 152539501 - MGP_NODShiLtJ_P0074401 Ncf1 protein_coding protein_coding MGP_NODShiLtJ_T0074402.1 MGP_NODShiLtJ_G0029956.1 mouse_genomes_project 5 152529047 152539501 - MGP_NODShiLtJ_P0074402 Ncf1 protein_coding protein_coding MGP_NODShiLtJ_T0074403.1 MGP_NODShiLtJ_G0029956.1 mouse_genomes_project 5 152530159 152531010 - Ncf1 protein_coding retained_intron MGP_NODShiLtJ_T0074404.1 MGP_NODShiLtJ_G0029956.1 mouse_genomes_project 5 152532232 152537187 - Ncf1 protein_coding retained_intron MGP_NODShiLtJ_T0074405.1 MGP_NODShiLtJ_G0029956.1 mouse_genomes_project 5 152534504 152536598 - Ncf1 protein_coding retained_intron MGP_NODShiLtJ_T0014811.1 MGP_NODShiLtJ_G0012919.1 mouse_genomes_project 5 31442811 31443178 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075053.1 MGP_NODShiLtJ_G0030074.1 mouse_genomes_project 5 157710401 157730719 + MGP_NODShiLtJ_P0075053 A430033K04Rik protein_coding protein_coding MGP_NODShiLtJ_T0075054.1 MGP_NODShiLtJ_G0030074.1 mouse_genomes_project 5 157710418 157743586 + MGP_NODShiLtJ_P0075054 A430033K04Rik protein_coding protein_coding MGP_NODShiLtJ_T0075055.1 MGP_NODShiLtJ_G0030074.1 mouse_genomes_project 5 157710436 157739979 + MGP_NODShiLtJ_P0075055 A430033K04Rik protein_coding protein_coding MGP_NODShiLtJ_T0014940.1 MGP_NODShiLtJ_G0013048.1 mouse_genomes_project 5 100085064 100086979 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075165.1 MGP_NODShiLtJ_G0030095.1 mouse_genomes_project 5 158988014 159010087 - MGP_NODShiLtJ_P0075165 Gm26938 protein_coding protein_coding MGP_NODShiLtJ_T0004615.1 MGP_NODShiLtJ_G0003996.1 mouse_genomes_project 5 38940418 38943918 - Gm26647 antisense antisense MGP_NODShiLtJ_T0001796.1 MGP_NODShiLtJ_G0001709.1 mouse_genomes_project 5 146478954 146480326 - TEC TEC MGP_NODShiLtJ_T0069935.1 MGP_NODShiLtJ_G0029112.1 mouse_genomes_project 5 21304828 21309508 + MGP_NODShiLtJ_P0069935 Tmem60 protein_coding protein_coding MGP_NODShiLtJ_T0069936.1 MGP_NODShiLtJ_G0029112.1 mouse_genomes_project 5 21305144 21307322 + Tmem60 protein_coding processed_transcript MGP_NODShiLtJ_T0071077.1 MGP_NODShiLtJ_G0029305.1 mouse_genomes_project 5 39366550 39654990 - MGP_NODShiLtJ_P0071077 Stk32b protein_coding protein_coding MGP_NODShiLtJ_T0099363.1 MGP_NODShiLtJ_G0037757.1 mouse_genomes_project 5 84543709 84543814 - Gm24502 snRNA snRNA MGP_NODShiLtJ_T0075531.1 MGP_NODShiLtJ_G0030181.1 mouse_genomes_project 5 166201245 166206972 - MGP_NODShiLtJ_P0075531 Gm6370 protein_coding protein_coding MGP_NODShiLtJ_T0010602.1 MGP_NODShiLtJ_G0008735.1 mouse_genomes_project 5 130733551 130733623 + Mir7027 miRNA miRNA MGP_NODShiLtJ_T0072064.1 MGP_NODShiLtJ_G0029479.1 mouse_genomes_project 5 99204535 99218589 - MGP_NODShiLtJ_P0072064 Ugt2b1 protein_coding protein_coding MGP_NODShiLtJ_T0014937.1 MGP_NODShiLtJ_G0013045.1 mouse_genomes_project 5 99463270 99463346 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014889.1 MGP_NODShiLtJ_G0012997.1 mouse_genomes_project 5 71458223 71459088 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099400.1 MGP_NODShiLtJ_G0037794.1 mouse_genomes_project 5 148880684 148880788 + Gm23761 snRNA snRNA MGP_NODShiLtJ_T0004806.1 MGP_NODShiLtJ_G0004133.1 mouse_genomes_project 5 156251269 156259545 + Gm17112 antisense antisense MGP_NODShiLtJ_T0072195.1 MGP_NODShiLtJ_G0029525.1 mouse_genomes_project 5 103556276 103594706 + MGP_NODShiLtJ_P0072195 5830473C10Rik protein_coding protein_coding MGP_NODShiLtJ_T0072196.1 MGP_NODShiLtJ_G0029525.1 mouse_genomes_project 5 103556386 103573768 + MGP_NODShiLtJ_P0072196 5830473C10Rik protein_coding protein_coding MGP_NODShiLtJ_T0011494.1 MGP_NODShiLtJ_G0009627.1 mouse_genomes_project 5 125291694 125291779 + Gm28000 misc_RNA misc_RNA MGP_NODShiLtJ_T0014771.1 MGP_NODShiLtJ_G0012879.1 mouse_genomes_project 5 22812862 22813232 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070207.1 MGP_NODShiLtJ_G0029164.1 mouse_genomes_project 5 26360705 26362666 + MGP_NODShiLtJ_P0070207 Cct8l1 protein_coding protein_coding MGP_NODShiLtJ_T0008271.1 MGP_NODShiLtJ_G0006716.1 mouse_genomes_project 5 136733892 136736433 - 1700021F13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008272.1 MGP_NODShiLtJ_G0006716.1 mouse_genomes_project 5 136733896 136736231 - 1700021F13Rik lincRNA lincRNA MGP_NODShiLtJ_T0074845.1 MGP_NODShiLtJ_G0030033.1 mouse_genomes_project 5 156273289 156283439 + MGP_NODShiLtJ_P0074845 Actl6b protein_coding protein_coding MGP_NODShiLtJ_T0074846.1 MGP_NODShiLtJ_G0030033.1 mouse_genomes_project 5 156273310 156274119 + Actl6b protein_coding retained_intron MGP_NODShiLtJ_T0074847.1 MGP_NODShiLtJ_G0030033.1 mouse_genomes_project 5 156273310 156286879 + MGP_NODShiLtJ_P0074847 Actl6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074848.1 MGP_NODShiLtJ_G0030033.1 mouse_genomes_project 5 156273311 156286013 + MGP_NODShiLtJ_P0074848 Actl6b protein_coding protein_coding MGP_NODShiLtJ_T0074849.1 MGP_NODShiLtJ_G0030033.1 mouse_genomes_project 5 156273327 156274805 + MGP_NODShiLtJ_P0074849 Actl6b protein_coding protein_coding MGP_NODShiLtJ_T0074850.1 MGP_NODShiLtJ_G0030033.1 mouse_genomes_project 5 156273329 156276429 + Actl6b protein_coding retained_intron MGP_NODShiLtJ_T0074851.1 MGP_NODShiLtJ_G0030033.1 mouse_genomes_project 5 156273329 156289792 + MGP_NODShiLtJ_P0074851 Actl6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074852.1 MGP_NODShiLtJ_G0030033.1 mouse_genomes_project 5 156273407 156289621 + MGP_NODShiLtJ_P0074852 Actl6b protein_coding protein_coding MGP_NODShiLtJ_T0074781.1 MGP_NODShiLtJ_G0030021.1 mouse_genomes_project 5 155913797 155918259 - MGP_NODShiLtJ_P0074781 protein_coding protein_coding MGP_NODShiLtJ_T0074782.1 MGP_NODShiLtJ_G0030021.1 mouse_genomes_project 5 155915024 155922531 - MGP_NODShiLtJ_P0074782 protein_coding protein_coding MGP_NODShiLtJ_T0015024.1 MGP_NODShiLtJ_G0013132.1 mouse_genomes_project 5 133743114 133743697 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074239.1 MGP_NODShiLtJ_G0029925.1 mouse_genomes_project 5 147023046 147154673 + MGP_NODShiLtJ_P0074239 Adgrd1 protein_coding protein_coding MGP_NODShiLtJ_T0074240.1 MGP_NODShiLtJ_G0029925.1 mouse_genomes_project 5 147023053 147028098 + Adgrd1 protein_coding retained_intron MGP_NODShiLtJ_T0074241.1 MGP_NODShiLtJ_G0029925.1 mouse_genomes_project 5 147023053 147153749 + MGP_NODShiLtJ_P0074241 Adgrd1 protein_coding protein_coding MGP_NODShiLtJ_T0008354.1 MGP_NODShiLtJ_G0006768.1 mouse_genomes_project 5 162652440 162653413 - Rbakdn lincRNA lincRNA MGP_NODShiLtJ_T0008355.1 MGP_NODShiLtJ_G0006768.1 mouse_genomes_project 5 162652440 162653365 - Rbakdn lincRNA lincRNA MGP_NODShiLtJ_T0001484.1 MGP_NODShiLtJ_G0001400.1 mouse_genomes_project 5 41539251 41541244 - TEC TEC MGP_NODShiLtJ_T0070192.1 MGP_NODShiLtJ_G0029161.1 mouse_genomes_project 5 26009996 26014008 + Galnt11 protein_coding processed_transcript MGP_NODShiLtJ_T0070194.1 MGP_NODShiLtJ_G0029161.1 mouse_genomes_project 5 26010974 26044550 + MGP_NODShiLtJ_P0070194 Galnt11 protein_coding protein_coding MGP_NODShiLtJ_T0070195.1 MGP_NODShiLtJ_G0029161.1 mouse_genomes_project 5 26025158 26044549 + MGP_NODShiLtJ_P0070195 Galnt11 protein_coding protein_coding MGP_NODShiLtJ_T0070196.1 MGP_NODShiLtJ_G0029161.1 mouse_genomes_project 5 26025568 26027549 + MGP_NODShiLtJ_P0070196 Galnt11 protein_coding protein_coding MGP_NODShiLtJ_T0070197.1 MGP_NODShiLtJ_G0029161.1 mouse_genomes_project 5 26026148 26044550 + MGP_NODShiLtJ_P0070197 Galnt11 protein_coding protein_coding MGP_NODShiLtJ_T0008101.1 MGP_NODShiLtJ_G0006595.1 mouse_genomes_project 5 83879840 83900073 + Gm6116 lincRNA lincRNA MGP_NODShiLtJ_T0075113.1 MGP_NODShiLtJ_G0030083.1 mouse_genomes_project 5 158470739 158480705 - MGP_NODShiLtJ_P0075113 Cox19 protein_coding protein_coding MGP_NODShiLtJ_T0075114.1 MGP_NODShiLtJ_G0030083.1 mouse_genomes_project 5 158472362 158480649 - Cox19 protein_coding processed_transcript MGP_NODShiLtJ_T0075115.1 MGP_NODShiLtJ_G0030083.1 mouse_genomes_project 5 158472680 158474116 - Cox19 protein_coding processed_transcript MGP_NODShiLtJ_T0075116.1 MGP_NODShiLtJ_G0030083.1 mouse_genomes_project 5 158472761 158486845 - MGP_NODShiLtJ_P0075116 Cox19 protein_coding protein_coding MGP_NODShiLtJ_T0075117.1 MGP_NODShiLtJ_G0030083.1 mouse_genomes_project 5 158472850 158480597 - MGP_NODShiLtJ_P0075117 Cox19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075118.1 MGP_NODShiLtJ_G0030083.1 mouse_genomes_project 5 158477488 158480632 - Cox19 protein_coding retained_intron MGP_NODShiLtJ_T0075119.1 MGP_NODShiLtJ_G0030083.1 mouse_genomes_project 5 158477657 158480637 - Cox19 protein_coding retained_intron MGP_NODShiLtJ_T0101948.1 MGP_NODShiLtJ_G0040116.1 mouse_genomes_project 5 95142316 95142905 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001649.1 MGP_NODShiLtJ_G0001563.1 mouse_genomes_project 5 82100063 82101056 + TEC TEC MGP_NODShiLtJ_T0001859.1 MGP_NODShiLtJ_G0001771.1 mouse_genomes_project 5 163310444 163313862 + TEC TEC MGP_NODShiLtJ_T0072896.1 MGP_NODShiLtJ_G0029684.1 mouse_genomes_project 5 126198691 126215739 - MGP_NODShiLtJ_P0072896 Pgam5 protein_coding protein_coding MGP_NODShiLtJ_T0072897.1 MGP_NODShiLtJ_G0029684.1 mouse_genomes_project 5 126198717 126215713 - MGP_NODShiLtJ_P0072897 Pgam5 protein_coding protein_coding MGP_NODShiLtJ_T0072898.1 MGP_NODShiLtJ_G0029684.1 mouse_genomes_project 5 126211076 126211876 - Pgam5 protein_coding retained_intron MGP_NODShiLtJ_T0072899.1 MGP_NODShiLtJ_G0029684.1 mouse_genomes_project 5 126211422 126215680 - MGP_NODShiLtJ_P0072899 Pgam5 protein_coding protein_coding MGP_NODShiLtJ_T0001500.1 MGP_NODShiLtJ_G0001416.1 mouse_genomes_project 5 47056482 47056825 + TEC TEC MGP_NODShiLtJ_T0069903.1 MGP_NODShiLtJ_G0029106.1 mouse_genomes_project 5 17367345 17541325 + MGP_NODShiLtJ_P0069903 Sema3c protein_coding protein_coding MGP_NODShiLtJ_T0069904.1 MGP_NODShiLtJ_G0029106.1 mouse_genomes_project 5 17367713 17489979 + MGP_NODShiLtJ_P0069904 Sema3c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069905.1 MGP_NODShiLtJ_G0029106.1 mouse_genomes_project 5 17367830 17371244 + Sema3c protein_coding retained_intron MGP_NODShiLtJ_T0069906.1 MGP_NODShiLtJ_G0029106.1 mouse_genomes_project 5 17367963 17480036 + MGP_NODShiLtJ_P0069906 Sema3c protein_coding protein_coding MGP_NODShiLtJ_T0069907.1 MGP_NODShiLtJ_G0029106.1 mouse_genomes_project 5 17502491 17541322 + Sema3c protein_coding retained_intron MGP_NODShiLtJ_T0008179.1 MGP_NODShiLtJ_G0006655.1 mouse_genomes_project 5 120558693 120563239 + Gm42749 lincRNA lincRNA MGP_NODShiLtJ_T0008180.1 MGP_NODShiLtJ_G0006655.1 mouse_genomes_project 5 120562612 120564997 + Gm42749 lincRNA lincRNA MGP_NODShiLtJ_T0072699.1 MGP_NODShiLtJ_G0029638.1 mouse_genomes_project 5 122706575 122710066 + MGP_NODShiLtJ_P0072699 Lpcat2b protein_coding protein_coding MGP_NODShiLtJ_T0073084.1 MGP_NODShiLtJ_G0029720.1 mouse_genomes_project 5 129861266 129900322 - MGP_NODShiLtJ_P0073084 Cmklr1 protein_coding protein_coding MGP_NODShiLtJ_T0073085.1 MGP_NODShiLtJ_G0029720.1 mouse_genomes_project 5 129864099 129877511 - MGP_NODShiLtJ_P0073085 Cmklr1 protein_coding protein_coding MGP_NODShiLtJ_T0073086.1 MGP_NODShiLtJ_G0029720.1 mouse_genomes_project 5 129864990 129893499 - MGP_NODShiLtJ_P0073086 Cmklr1 protein_coding protein_coding MGP_NODShiLtJ_T0073087.1 MGP_NODShiLtJ_G0029720.1 mouse_genomes_project 5 129881201 129900292 - Cmklr1 protein_coding processed_transcript MGP_NODShiLtJ_T0001620.1 MGP_NODShiLtJ_G0001535.1 mouse_genomes_project 5 74257094 74258663 + TEC TEC MGP_NODShiLtJ_T0073465.1 MGP_NODShiLtJ_G0029791.1 mouse_genomes_project 5 134744124 134778842 + MGP_NODShiLtJ_P0073465 Fbxo21 protein_coding protein_coding MGP_NODShiLtJ_T0073466.1 MGP_NODShiLtJ_G0029791.1 mouse_genomes_project 5 134744168 134755004 + Fbxo21 protein_coding retained_intron MGP_NODShiLtJ_T0073467.1 MGP_NODShiLtJ_G0029791.1 mouse_genomes_project 5 134744178 134778841 + MGP_NODShiLtJ_P0073467 Fbxo21 protein_coding protein_coding MGP_NODShiLtJ_T0073468.1 MGP_NODShiLtJ_G0029791.1 mouse_genomes_project 5 134744222 134778843 + MGP_NODShiLtJ_P0073468 Fbxo21 protein_coding protein_coding MGP_NODShiLtJ_T0073469.1 MGP_NODShiLtJ_G0029791.1 mouse_genomes_project 5 134744708 134753657 + Fbxo21 protein_coding processed_transcript MGP_NODShiLtJ_T0073470.1 MGP_NODShiLtJ_G0029791.1 mouse_genomes_project 5 134746696 134753543 + Fbxo21 protein_coding processed_transcript MGP_NODShiLtJ_T0074178.1 MGP_NODShiLtJ_G0029910.1 mouse_genomes_project 5 143009604 143011000 - MGP_NODShiLtJ_P0074178 protein_coding protein_coding MGP_NODShiLtJ_T0014967.1 MGP_NODShiLtJ_G0013075.1 mouse_genomes_project 5 113344514 113344934 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071164.1 MGP_NODShiLtJ_G0029321.1 mouse_genomes_project 5 44269764 44272783 - MGP_NODShiLtJ_P0071164 Nkx3-2 protein_coding protein_coding MGP_NODShiLtJ_T0018016.1 MGP_NODShiLtJ_G0015471.1 mouse_genomes_project 5 85357023 85367674 + 4930432L08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0001640.1 MGP_NODShiLtJ_G0001555.1 mouse_genomes_project 5 77602803 77603129 - TEC TEC MGP_NODShiLtJ_T0072450.1 MGP_NODShiLtJ_G0029585.1 mouse_genomes_project 5 114506087 114594182 - MGP_NODShiLtJ_P0072450 Tmem150c protein_coding protein_coding MGP_NODShiLtJ_T0072451.1 MGP_NODShiLtJ_G0029585.1 mouse_genomes_project 5 114512156 114593244 - Tmem150c protein_coding retained_intron MGP_NODShiLtJ_T0072452.1 MGP_NODShiLtJ_G0029585.1 mouse_genomes_project 5 114512157 114554124 - Tmem150c protein_coding retained_intron MGP_NODShiLtJ_T0072453.1 MGP_NODShiLtJ_G0029585.1 mouse_genomes_project 5 114514216 114593944 - Tmem150c protein_coding retained_intron MGP_NODShiLtJ_T0072454.1 MGP_NODShiLtJ_G0029585.1 mouse_genomes_project 5 114514337 114593093 - MGP_NODShiLtJ_P0072454 Tmem150c protein_coding protein_coding MGP_NODShiLtJ_T0099365.1 MGP_NODShiLtJ_G0037759.1 mouse_genomes_project 5 90057409 90057516 + Gm24304 snRNA snRNA MGP_NODShiLtJ_T0001636.1 MGP_NODShiLtJ_G0001551.1 mouse_genomes_project 5 77175318 77179027 - TEC TEC MGP_NODShiLtJ_T0100607.1 MGP_NODShiLtJ_G0039001.1 mouse_genomes_project 5 56856233 56856345 - Gm23532 snoRNA snoRNA MGP_NODShiLtJ_T0001493.1 MGP_NODShiLtJ_G0001409.1 mouse_genomes_project 5 46437156 46439684 + TEC TEC MGP_NODShiLtJ_T0001764.1 MGP_NODShiLtJ_G0001678.1 mouse_genomes_project 5 139026970 139031736 + TEC TEC MGP_NODShiLtJ_T0070829.1 MGP_NODShiLtJ_G0029268.1 mouse_genomes_project 5 36127700 36252093 + MGP_NODShiLtJ_P0070829 Fam193a protein_coding protein_coding MGP_NODShiLtJ_T0070830.1 MGP_NODShiLtJ_G0029268.1 mouse_genomes_project 5 36174460 36251384 + MGP_NODShiLtJ_P0070830 Fam193a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0070831.1 MGP_NODShiLtJ_G0029268.1 mouse_genomes_project 5 36190904 36251384 + MGP_NODShiLtJ_P0070831 Fam193a protein_coding protein_coding MGP_NODShiLtJ_T0070832.1 MGP_NODShiLtJ_G0029268.1 mouse_genomes_project 5 36195771 36208156 + MGP_NODShiLtJ_P0070832 Fam193a protein_coding protein_coding MGP_NODShiLtJ_T0070833.1 MGP_NODShiLtJ_G0029268.1 mouse_genomes_project 5 36208249 36223973 + MGP_NODShiLtJ_P0070833 Fam193a protein_coding protein_coding MGP_NODShiLtJ_T0070834.1 MGP_NODShiLtJ_G0029268.1 mouse_genomes_project 5 36231048 36243341 + MGP_NODShiLtJ_P0070834 Fam193a protein_coding protein_coding MGP_NODShiLtJ_T0001518.1 MGP_NODShiLtJ_G0001434.1 mouse_genomes_project 5 49783920 49785774 + TEC TEC MGP_NODShiLtJ_T0001483.1 MGP_NODShiLtJ_G0001399.1 mouse_genomes_project 5 40104368 40108600 - TEC TEC MGP_NODShiLtJ_T0001742.1 MGP_NODShiLtJ_G0001656.1 mouse_genomes_project 5 133486413 133486846 + TEC TEC MGP_NODShiLtJ_T0001592.1 MGP_NODShiLtJ_G0001507.1 mouse_genomes_project 5 72808573 72810950 - TEC TEC MGP_NODShiLtJ_T0097814.1 MGP_NODShiLtJ_G0036226.1 mouse_genomes_project 5 132570598 132570850 - pseudogene pseudogene MGP_NODShiLtJ_T0001504.1 MGP_NODShiLtJ_G0001420.1 mouse_genomes_project 5 47310414 47310553 + TEC TEC MGP_NODShiLtJ_T0001729.1 MGP_NODShiLtJ_G0001643.1 mouse_genomes_project 5 129543315 129544609 + TEC TEC MGP_NODShiLtJ_T0074692.1 MGP_NODShiLtJ_G0030004.1 mouse_genomes_project 5 154674913 154679280 + MGP_NODShiLtJ_P0074692 Alkbh4 protein_coding protein_coding MGP_NODShiLtJ_T0074693.1 MGP_NODShiLtJ_G0030004.1 mouse_genomes_project 5 154674921 154680380 + MGP_NODShiLtJ_P0074693 Alkbh4 protein_coding protein_coding MGP_NODShiLtJ_T0074694.1 MGP_NODShiLtJ_G0030004.1 mouse_genomes_project 5 154674925 154679546 + MGP_NODShiLtJ_P0074694 Alkbh4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074695.1 MGP_NODShiLtJ_G0030004.1 mouse_genomes_project 5 154674969 154679271 + MGP_NODShiLtJ_P0074695 Alkbh4 protein_coding protein_coding MGP_NODShiLtJ_T0074696.1 MGP_NODShiLtJ_G0030004.1 mouse_genomes_project 5 154677548 154680383 + MGP_NODShiLtJ_P0074696 Alkbh4 protein_coding protein_coding MGP_NODShiLtJ_T0070947.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37425783 37456477 + MGP_NODShiLtJ_P0070947 Acox3 protein_coding protein_coding MGP_NODShiLtJ_T0070948.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37425794 37455283 + MGP_NODShiLtJ_P0070948 Acox3 protein_coding protein_coding MGP_NODShiLtJ_T0070949.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37425821 37431512 + MGP_NODShiLtJ_P0070949 Acox3 protein_coding protein_coding MGP_NODShiLtJ_T0070950.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37425822 37458042 + MGP_NODShiLtJ_P0070950 Acox3 protein_coding protein_coding MGP_NODShiLtJ_T0070951.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37425835 37430207 + Acox3 protein_coding retained_intron MGP_NODShiLtJ_T0070952.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37425845 37454552 + MGP_NODShiLtJ_P0070952 Acox3 protein_coding protein_coding MGP_NODShiLtJ_T0070953.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37426266 37454545 + MGP_NODShiLtJ_P0070953 Acox3 protein_coding protein_coding MGP_NODShiLtJ_T0070954.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37444353 37451011 + MGP_NODShiLtJ_P0070954 Acox3 protein_coding protein_coding MGP_NODShiLtJ_T0070955.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37449654 37452596 + Acox3 protein_coding retained_intron MGP_NODShiLtJ_T0070956.1 MGP_NODShiLtJ_G0029285.1 mouse_genomes_project 5 37452775 37454563 + Acox3 protein_coding retained_intron MGP_NODShiLtJ_T0074126.1 MGP_NODShiLtJ_G0029903.1 mouse_genomes_project 5 142234726 142243574 + Atp6v0a2 protein_coding processed_transcript MGP_NODShiLtJ_T0074127.1 MGP_NODShiLtJ_G0029903.1 mouse_genomes_project 5 142235202 142271042 + MGP_NODShiLtJ_P0074127 Atp6v0a2 protein_coding protein_coding MGP_NODShiLtJ_T0074128.1 MGP_NODShiLtJ_G0029903.1 mouse_genomes_project 5 142235215 142268727 + MGP_NODShiLtJ_P0074128 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074129.1 MGP_NODShiLtJ_G0029903.1 mouse_genomes_project 5 142235319 142248246 + Atp6v0a2 protein_coding retained_intron MGP_NODShiLtJ_T0074130.1 MGP_NODShiLtJ_G0029903.1 mouse_genomes_project 5 142260738 142264481 + Atp6v0a2 protein_coding processed_transcript MGP_NODShiLtJ_T0074131.1 MGP_NODShiLtJ_G0029903.1 mouse_genomes_project 5 142262293 142270188 + Atp6v0a2 protein_coding retained_intron MGP_NODShiLtJ_T0074132.1 MGP_NODShiLtJ_G0029903.1 mouse_genomes_project 5 142264784 142268404 + MGP_NODShiLtJ_P0074132 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074769.1 MGP_NODShiLtJ_G0030017.1 mouse_genomes_project 5 155667406 155678509 - MGP_NODShiLtJ_P0074769 Ap1s1 protein_coding protein_coding MGP_NODShiLtJ_T0074770.1 MGP_NODShiLtJ_G0030017.1 mouse_genomes_project 5 155667755 155670065 - Ap1s1 protein_coding retained_intron MGP_NODShiLtJ_T0074771.1 MGP_NODShiLtJ_G0030017.1 mouse_genomes_project 5 155669793 155678169 - MGP_NODShiLtJ_P0074771 Ap1s1 protein_coding protein_coding MGP_NODShiLtJ_T0074772.1 MGP_NODShiLtJ_G0030017.1 mouse_genomes_project 5 155669810 155678416 - MGP_NODShiLtJ_P0074772 Ap1s1 protein_coding protein_coding MGP_NODShiLtJ_T0074773.1 MGP_NODShiLtJ_G0030017.1 mouse_genomes_project 5 155675441 155677781 - MGP_NODShiLtJ_P0074773 Ap1s1 protein_coding protein_coding MGP_NODShiLtJ_T0014846.1 MGP_NODShiLtJ_G0012954.1 mouse_genomes_project 5 47055638 47059024 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071293.1 MGP_NODShiLtJ_G0029343.1 mouse_genomes_project 5 51753493 52145234 - Kcnip4 protein_coding processed_transcript MGP_NODShiLtJ_T0071294.1 MGP_NODShiLtJ_G0029343.1 mouse_genomes_project 5 51753493 51984747 - MGP_NODShiLtJ_P0071294 Kcnip4 protein_coding protein_coding MGP_NODShiLtJ_T0071295.1 MGP_NODShiLtJ_G0029343.1 mouse_genomes_project 5 51753493 53051120 - MGP_NODShiLtJ_P0071295 Kcnip4 protein_coding protein_coding MGP_NODShiLtJ_T0071296.1 MGP_NODShiLtJ_G0029343.1 mouse_genomes_project 5 51753493 52308180 - MGP_NODShiLtJ_P0071296 Kcnip4 protein_coding protein_coding MGP_NODShiLtJ_T0071297.1 MGP_NODShiLtJ_G0029343.1 mouse_genomes_project 5 51753494 51866977 - Kcnip4 protein_coding processed_transcript MGP_NODShiLtJ_T0071298.1 MGP_NODShiLtJ_G0029343.1 mouse_genomes_project 5 51753498 53050977 - MGP_NODShiLtJ_P0071298 Kcnip4 protein_coding protein_coding MGP_NODShiLtJ_T0071299.1 MGP_NODShiLtJ_G0029343.1 mouse_genomes_project 5 51753503 52777073 - MGP_NODShiLtJ_P0071299 Kcnip4 protein_coding protein_coding MGP_NODShiLtJ_T0071302.1 MGP_NODShiLtJ_G0029343.1 mouse_genomes_project 5 51760025 52145234 - Kcnip4 protein_coding processed_transcript MGP_NODShiLtJ_T0073279.1 MGP_NODShiLtJ_G0029758.1 mouse_genomes_project 5 131542132 131556519 - MGP_NODShiLtJ_P0073279 Unc119b protein_coding protein_coding MGP_NODShiLtJ_T0073280.1 MGP_NODShiLtJ_G0029758.1 mouse_genomes_project 5 131546442 131549009 - Unc119b protein_coding retained_intron MGP_NODShiLtJ_T0073281.1 MGP_NODShiLtJ_G0029758.1 mouse_genomes_project 5 131551118 131556469 - Unc119b protein_coding retained_intron MGP_NODShiLtJ_T0072842.1 MGP_NODShiLtJ_G0029668.1 mouse_genomes_project 5 124811769 124820237 - MGP_NODShiLtJ_P0072842 protein_coding protein_coding MGP_NODShiLtJ_T0008087.1 MGP_NODShiLtJ_G0006585.1 mouse_genomes_project 5 74939681 74945172 + Gm43698 lincRNA lincRNA MGP_NODShiLtJ_T0008088.1 MGP_NODShiLtJ_G0006585.1 mouse_genomes_project 5 74944899 74945993 + Gm43698 lincRNA lincRNA MGP_NODShiLtJ_T0074710.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154797059 154916584 - MGP_NODShiLtJ_P0074710 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074711.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154797059 155133179 - MGP_NODShiLtJ_P0074711 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074712.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154797059 155133163 - MGP_NODShiLtJ_P0074712 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074713.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154797434 155133193 - MGP_NODShiLtJ_P0074713 Cux1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074714.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154799345 155133178 - MGP_NODShiLtJ_P0074714 Cux1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074715.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154821162 155133360 - MGP_NODShiLtJ_P0074715 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074716.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154823123 155133161 - MGP_NODShiLtJ_P0074716 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074717.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154829211 155132183 - MGP_NODShiLtJ_P0074717 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074718.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154829242 155131264 - MGP_NODShiLtJ_P0074718 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074719.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154829249 154857220 - Cux1 protein_coding processed_transcript MGP_NODShiLtJ_T0074720.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154829547 155133134 - MGP_NODShiLtJ_P0074720 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074721.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154868949 154919863 - MGP_NODShiLtJ_P0074721 Cux1 protein_coding protein_coding MGP_NODShiLtJ_T0074722.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 154918890 155133167 - Cux1 protein_coding retained_intron MGP_NODShiLtJ_T0074723.1 MGP_NODShiLtJ_G0030008.1 mouse_genomes_project 5 155044340 155133405 - Cux1 protein_coding retained_intron MGP_NODShiLtJ_T0098054.1 MGP_NODShiLtJ_G0036466.1 mouse_genomes_project 5 137011014 137011123 + n-R5s176 rRNA rRNA MGP_NODShiLtJ_T0001562.1 MGP_NODShiLtJ_G0001478.1 mouse_genomes_project 5 56400028 56402430 - TEC TEC MGP_NODShiLtJ_T0074489.1 MGP_NODShiLtJ_G0029964.1 mouse_genomes_project 5 153001424 153035201 - MGP_NODShiLtJ_P0074489 Limk1 protein_coding protein_coding MGP_NODShiLtJ_T0074490.1 MGP_NODShiLtJ_G0029964.1 mouse_genomes_project 5 153001425 153024790 - MGP_NODShiLtJ_P0074490 Limk1 protein_coding protein_coding MGP_NODShiLtJ_T0074491.1 MGP_NODShiLtJ_G0029964.1 mouse_genomes_project 5 153001584 153024762 - MGP_NODShiLtJ_P0074491 Limk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074492.1 MGP_NODShiLtJ_G0029964.1 mouse_genomes_project 5 153005380 153010876 - MGP_NODShiLtJ_P0074492 Limk1 protein_coding protein_coding MGP_NODShiLtJ_T0074493.1 MGP_NODShiLtJ_G0029964.1 mouse_genomes_project 5 153010614 153015094 - Limk1 protein_coding retained_intron MGP_NODShiLtJ_T0074494.1 MGP_NODShiLtJ_G0029964.1 mouse_genomes_project 5 153014847 153035177 - Limk1 protein_coding retained_intron MGP_NODShiLtJ_T0071499.1 MGP_NODShiLtJ_G0029382.1 mouse_genomes_project 5 72825869 72896817 - MGP_NODShiLtJ_P0071499 Gm43552 protein_coding protein_coding MGP_NODShiLtJ_T0074741.1 MGP_NODShiLtJ_G0030011.1 mouse_genomes_project 5 155521969 155526687 + MGP_NODShiLtJ_P0074741 Ift22 protein_coding protein_coding MGP_NODShiLtJ_T0074742.1 MGP_NODShiLtJ_G0030011.1 mouse_genomes_project 5 155521973 155525837 + MGP_NODShiLtJ_P0074742 Ift22 protein_coding protein_coding MGP_NODShiLtJ_T0074743.1 MGP_NODShiLtJ_G0030011.1 mouse_genomes_project 5 155522003 155526688 + MGP_NODShiLtJ_P0074743 Ift22 protein_coding protein_coding MGP_NODShiLtJ_T0074744.1 MGP_NODShiLtJ_G0030011.1 mouse_genomes_project 5 155524598 155525172 + Ift22 protein_coding retained_intron MGP_NODShiLtJ_T0099390.1 MGP_NODShiLtJ_G0037784.1 mouse_genomes_project 5 131966097 131966350 + Gm24407 snRNA snRNA MGP_NODShiLtJ_T0001584.1 MGP_NODShiLtJ_G0001500.1 mouse_genomes_project 5 70891927 70898441 - TEC TEC MGP_NODShiLtJ_T0001585.1 MGP_NODShiLtJ_G0001500.1 mouse_genomes_project 5 70897496 70897811 - TEC TEC MGP_NODShiLtJ_T0072595.1 MGP_NODShiLtJ_G0029614.1 mouse_genomes_project 5 119105543 119121870 + MGP_NODShiLtJ_P0072595 Mepe protein_coding protein_coding MGP_NODShiLtJ_T0069610.1 MGP_NODShiLtJ_G0029059.1 mouse_genomes_project 5 316907 343037 + MGP_NODShiLtJ_P0069610 Fam133b protein_coding protein_coding MGP_NODShiLtJ_T0069611.1 MGP_NODShiLtJ_G0029059.1 mouse_genomes_project 5 316910 333941 + Fam133b protein_coding retained_intron MGP_NODShiLtJ_T0069612.1 MGP_NODShiLtJ_G0029059.1 mouse_genomes_project 5 316912 342540 + MGP_NODShiLtJ_P0069612 Fam133b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069613.1 MGP_NODShiLtJ_G0029059.1 mouse_genomes_project 5 316912 342540 + MGP_NODShiLtJ_P0069613 Fam133b protein_coding protein_coding MGP_NODShiLtJ_T0069614.1 MGP_NODShiLtJ_G0029059.1 mouse_genomes_project 5 316918 342613 + Fam133b protein_coding retained_intron MGP_NODShiLtJ_T0069615.1 MGP_NODShiLtJ_G0029059.1 mouse_genomes_project 5 332558 337521 + Fam133b protein_coding retained_intron MGP_NODShiLtJ_T0069616.1 MGP_NODShiLtJ_G0029059.1 mouse_genomes_project 5 337836 338532 + Fam133b protein_coding retained_intron MGP_NODShiLtJ_T0069617.1 MGP_NODShiLtJ_G0029059.1 mouse_genomes_project 5 339630 341831 + Fam133b protein_coding retained_intron MGP_NODShiLtJ_T0000002.1 MGP_NODShiLtJ_G0000002.1 mouse_genomes_project 5 21117785 21121561 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_NODShiLtJ_T0000003.1 MGP_NODShiLtJ_G0000002.1 mouse_genomes_project 5 21117785 21121558 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_NODShiLtJ_T0014781.1 MGP_NODShiLtJ_G0012889.1 mouse_genomes_project 5 24008263 24008387 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099379.1 MGP_NODShiLtJ_G0037773.1 mouse_genomes_project 5 118361513 118361684 + Gm25721 snRNA snRNA MGP_NODShiLtJ_T0074586.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153847168 153991497 - MGP_NODShiLtJ_P0074586 Hip1 protein_coding protein_coding MGP_NODShiLtJ_T0074587.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153847172 153877773 - MGP_NODShiLtJ_P0074587 Hip1 protein_coding protein_coding MGP_NODShiLtJ_T0074588.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153871579 153872759 - Hip1 protein_coding retained_intron MGP_NODShiLtJ_T0074589.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153872885 153882808 - MGP_NODShiLtJ_P0074589 Hip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074590.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153877063 153991502 - Hip1 protein_coding retained_intron MGP_NODShiLtJ_T0074591.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153881211 153895841 - Hip1 protein_coding processed_transcript MGP_NODShiLtJ_T0074592.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153892073 153932588 - MGP_NODShiLtJ_P0074592 Hip1 protein_coding protein_coding MGP_NODShiLtJ_T0074593.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153895724 153901532 - Hip1 protein_coding retained_intron MGP_NODShiLtJ_T0074594.1 MGP_NODShiLtJ_G0029985.1 mouse_genomes_project 5 153902407 153991497 - Hip1 protein_coding retained_intron MGP_NODShiLtJ_T0099359.1 MGP_NODShiLtJ_G0037753.1 mouse_genomes_project 5 78850413 78850520 - Gm26072 snRNA snRNA MGP_NODShiLtJ_T0071264.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249119 51672423 + MGP_NODShiLtJ_P0071264 Slit2 protein_coding protein_coding MGP_NODShiLtJ_T0071265.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249135 51256701 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071266.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249135 51518851 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071267.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249135 51670200 + MGP_NODShiLtJ_P0071267 Slit2 protein_coding protein_coding MGP_NODShiLtJ_T0071268.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249135 51670200 + MGP_NODShiLtJ_P0071268 Slit2 protein_coding protein_coding MGP_NODShiLtJ_T0071269.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249135 51669071 + MGP_NODShiLtJ_P0071269 Slit2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071270.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249135 51670200 + MGP_NODShiLtJ_P0071270 Slit2 protein_coding protein_coding MGP_NODShiLtJ_T0071271.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249139 51380318 + Slit2 protein_coding processed_transcript MGP_NODShiLtJ_T0071272.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51249158 51251650 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071273.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51250975 51490296 + Slit2 protein_coding processed_transcript MGP_NODShiLtJ_T0071274.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51253823 51528549 + MGP_NODShiLtJ_P0071274 Slit2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071275.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51489259 51529757 + Slit2 protein_coding processed_transcript MGP_NODShiLtJ_T0071276.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51507901 51512867 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071277.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51515930 51563664 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071278.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51527165 51580957 + Slit2 protein_coding processed_transcript MGP_NODShiLtJ_T0071279.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51568367 51595624 + Slit2 protein_coding processed_transcript MGP_NODShiLtJ_T0071280.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51582321 51646512 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071281.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51595672 51621849 + MGP_NODShiLtJ_P0071281 Slit2 protein_coding protein_coding MGP_NODShiLtJ_T0071282.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51601162 51610194 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071283.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51610758 51624934 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071284.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51618855 51621803 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071285.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51638821 51645364 + Slit2 protein_coding retained_intron MGP_NODShiLtJ_T0071286.1 MGP_NODShiLtJ_G0029341.1 mouse_genomes_project 5 51645342 51667187 + MGP_NODShiLtJ_P0071286 Slit2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070081.1 MGP_NODShiLtJ_G0029140.1 mouse_genomes_project 5 25091767 25111390 + MGP_NODShiLtJ_P0070081 Nos3 protein_coding protein_coding MGP_NODShiLtJ_T0070082.1 MGP_NODShiLtJ_G0029140.1 mouse_genomes_project 5 25091767 25111243 + MGP_NODShiLtJ_P0070082 Nos3 protein_coding protein_coding MGP_NODShiLtJ_T0014801.1 MGP_NODShiLtJ_G0012909.1 mouse_genomes_project 5 28822136 28823118 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015051.1 MGP_NODShiLtJ_G0013159.1 mouse_genomes_project 5 156129611 156129888 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0014742.1 MGP_NODShiLtJ_G0012850.1 mouse_genomes_project 5 11305625 11307199 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070789.1 MGP_NODShiLtJ_G0029261.1 mouse_genomes_project 5 35687589 35697521 + MGP_NODShiLtJ_P0070789 Nat8l protein_coding protein_coding MGP_NODShiLtJ_T0070790.1 MGP_NODShiLtJ_G0029261.1 mouse_genomes_project 5 35691368 35692449 + Nat8l protein_coding processed_transcript MGP_NODShiLtJ_T0073245.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131287523 131303589 + MGP_NODShiLtJ_P0073245 Oasl2 protein_coding protein_coding MGP_NODShiLtJ_T0073246.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131287588 131290484 + MGP_NODShiLtJ_P0073246 Oasl2 protein_coding protein_coding MGP_NODShiLtJ_T0073247.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131287617 131290609 + MGP_NODShiLtJ_P0073247 Oasl2 protein_coding protein_coding MGP_NODShiLtJ_T0073248.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131288119 131288938 + Oasl2 protein_coding retained_intron MGP_NODShiLtJ_T0073249.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131288163 131290921 + Oasl2 protein_coding retained_intron MGP_NODShiLtJ_T0073250.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131288329 131303581 + MGP_NODShiLtJ_P0073250 Oasl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073251.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131292014 131302575 + MGP_NODShiLtJ_P0073251 Oasl2 protein_coding protein_coding MGP_NODShiLtJ_T0073252.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131292495 131294603 + Oasl2 protein_coding retained_intron MGP_NODShiLtJ_T0073253.1 MGP_NODShiLtJ_G0029751.1 mouse_genomes_project 5 131295091 131297424 + Oasl2 protein_coding retained_intron MGP_NODShiLtJ_T0001563.1 MGP_NODShiLtJ_G0001479.1 mouse_genomes_project 5 57907047 57910960 + TEC TEC MGP_NODShiLtJ_T0072212.1 MGP_NODShiLtJ_G0029531.1 mouse_genomes_project 5 103814829 103826840 + MGP_NODShiLtJ_P0072212 Cxcl15 protein_coding protein_coding MGP_NODShiLtJ_T0101968.1 MGP_NODShiLtJ_G0040136.1 mouse_genomes_project 5 162623900 162624839 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0072042.1 MGP_NODShiLtJ_G0029472.1 mouse_genomes_project 5 98626132 98685106 - MGP_NODShiLtJ_P0072042 Tmprss11a protein_coding protein_coding MGP_NODShiLtJ_T0072043.1 MGP_NODShiLtJ_G0029472.1 mouse_genomes_project 5 98631000 98634103 - Tmprss11a protein_coding retained_intron MGP_NODShiLtJ_T0071198.1 MGP_NODShiLtJ_G0029329.1 mouse_genomes_project 5 46543436 46590041 + MGP_NODShiLtJ_P0071198 Cd38 protein_coding protein_coding MGP_NODShiLtJ_T0071199.1 MGP_NODShiLtJ_G0029329.1 mouse_genomes_project 5 46543743 46544624 + Cd38 protein_coding retained_intron MGP_NODShiLtJ_T0010608.1 MGP_NODShiLtJ_G0008741.1 mouse_genomes_project 5 140051751 140051870 + Mir8115 miRNA miRNA MGP_NODShiLtJ_T0070348.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31854781 31862750 + MGP_NODShiLtJ_P0070348 Cenpa protein_coding protein_coding MGP_NODShiLtJ_T0070349.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31854901 31862298 + MGP_NODShiLtJ_P0070349 Cenpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070350.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31854916 31862235 + MGP_NODShiLtJ_P0070350 Cenpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070351.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31854939 31862329 + Cenpa protein_coding retained_intron MGP_NODShiLtJ_T0070352.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31854947 31857764 + MGP_NODShiLtJ_P0070352 Cenpa protein_coding protein_coding MGP_NODShiLtJ_T0070353.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31854961 31861984 + MGP_NODShiLtJ_P0070353 Cenpa protein_coding protein_coding MGP_NODShiLtJ_T0070354.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31854964 31858685 + Cenpa protein_coding retained_intron MGP_NODShiLtJ_T0070355.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31854978 31862329 + MGP_NODShiLtJ_P0070355 Cenpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070356.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31855002 31862306 + MGP_NODShiLtJ_P0070356 Cenpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070357.1 MGP_NODShiLtJ_G0029196.1 mouse_genomes_project 5 31859874 31862122 + Cenpa protein_coding retained_intron MGP_NODShiLtJ_T0014860.1 MGP_NODShiLtJ_G0012968.1 mouse_genomes_project 5 58630788 58641709 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0072184.1 MGP_NODShiLtJ_G0029521.1 mouse_genomes_project 5 103348648 103349948 + MGP_NODShiLtJ_P0072184 Gm9958 protein_coding protein_coding MGP_NODShiLtJ_T0001672.1 MGP_NODShiLtJ_G0001586.1 mouse_genomes_project 5 103827033 103830166 + TEC TEC MGP_NODShiLtJ_T0014837.1 MGP_NODShiLtJ_G0012945.1 mouse_genomes_project 5 40575136 40575535 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0070888.1 MGP_NODShiLtJ_G0029274.1 mouse_genomes_project 5 36434371 36533221 + MGP_NODShiLtJ_P0070888 Grk4 protein_coding protein_coding MGP_NODShiLtJ_T0070889.1 MGP_NODShiLtJ_G0029274.1 mouse_genomes_project 5 36434371 36479650 + MGP_NODShiLtJ_P0070889 Grk4 protein_coding protein_coding MGP_NODShiLtJ_T0070890.1 MGP_NODShiLtJ_G0029274.1 mouse_genomes_project 5 36434973 36450635 + MGP_NODShiLtJ_P0070890 Grk4 protein_coding protein_coding MGP_NODShiLtJ_T0070891.1 MGP_NODShiLtJ_G0029274.1 mouse_genomes_project 5 36489376 36521988 + Grk4 protein_coding processed_transcript MGP_NODShiLtJ_T0070892.1 MGP_NODShiLtJ_G0029274.1 mouse_genomes_project 5 36521092 36533223 + Grk4 protein_coding processed_transcript MGP_NODShiLtJ_T0074661.1 MGP_NODShiLtJ_G0030000.1 mouse_genomes_project 5 154577839 154589572 + Upk3bl protein_coding processed_transcript MGP_NODShiLtJ_T0074662.1 MGP_NODShiLtJ_G0030000.1 mouse_genomes_project 5 154580538 154589572 + MGP_NODShiLtJ_P0074662 Upk3bl protein_coding protein_coding MGP_NODShiLtJ_T0074663.1 MGP_NODShiLtJ_G0030000.1 mouse_genomes_project 5 154580614 154589567 + MGP_NODShiLtJ_P0074663 Upk3bl protein_coding protein_coding MGP_NODShiLtJ_T0074664.1 MGP_NODShiLtJ_G0030000.1 mouse_genomes_project 5 154580614 154589574 + MGP_NODShiLtJ_P0074664 Upk3bl protein_coding protein_coding MGP_NODShiLtJ_T0074665.1 MGP_NODShiLtJ_G0030000.1 mouse_genomes_project 5 154583396 154589558 + Upk3bl protein_coding processed_transcript MGP_NODShiLtJ_T0074666.1 MGP_NODShiLtJ_G0030000.1 mouse_genomes_project 5 154583469 154589560 + MGP_NODShiLtJ_P0074666 Upk3bl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001591.1 MGP_NODShiLtJ_G0001506.1 mouse_genomes_project 5 72803681 72804448 + TEC TEC MGP_NODShiLtJ_T0072695.1 MGP_NODShiLtJ_G0029637.1 mouse_genomes_project 5 122677777 122688662 + MGP_NODShiLtJ_P0072695 Ephx4 protein_coding protein_coding MGP_NODShiLtJ_T0072696.1 MGP_NODShiLtJ_G0029637.1 mouse_genomes_project 5 122678535 122705062 + MGP_NODShiLtJ_P0072696 Ephx4 protein_coding protein_coding MGP_NODShiLtJ_T0072697.1 MGP_NODShiLtJ_G0029637.1 mouse_genomes_project 5 122678814 122688570 + MGP_NODShiLtJ_P0072697 Ephx4 protein_coding protein_coding MGP_NODShiLtJ_T0072698.1 MGP_NODShiLtJ_G0029637.1 mouse_genomes_project 5 122680824 122688630 + MGP_NODShiLtJ_P0072698 Ephx4 protein_coding protein_coding MGP_NODShiLtJ_T0075041.1 MGP_NODShiLtJ_G0030072.1 mouse_genomes_project 5 157512145 157531061 + MGP_NODShiLtJ_P0075041 Zfp157 protein_coding protein_coding MGP_NODShiLtJ_T0075042.1 MGP_NODShiLtJ_G0030072.1 mouse_genomes_project 5 157512156 157518706 + Zfp157 protein_coding retained_intron MGP_NODShiLtJ_T0075043.1 MGP_NODShiLtJ_G0030072.1 mouse_genomes_project 5 157512184 157517782 + Zfp157 protein_coding retained_intron MGP_NODShiLtJ_T0075044.1 MGP_NODShiLtJ_G0030072.1 mouse_genomes_project 5 157512188 157518750 + Zfp157 protein_coding retained_intron MGP_NODShiLtJ_T0075045.1 MGP_NODShiLtJ_G0030072.1 mouse_genomes_project 5 157512196 157526706 + MGP_NODShiLtJ_P0075045 Zfp157 protein_coding protein_coding MGP_NODShiLtJ_T0075046.1 MGP_NODShiLtJ_G0030072.1 mouse_genomes_project 5 157512217 157526718 + MGP_NODShiLtJ_P0075046 Zfp157 protein_coding protein_coding MGP_NODShiLtJ_T0014955.1 MGP_NODShiLtJ_G0013063.1 mouse_genomes_project 5 104853095 104853975 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010571.1 MGP_NODShiLtJ_G0008704.1 mouse_genomes_project 5 36834759 36834826 + Mir3097 miRNA miRNA MGP_NODShiLtJ_T0071967.1 MGP_NODShiLtJ_G0029459.1 mouse_genomes_project 5 86381222 86404634 + MGP_NODShiLtJ_P0071967 Rest protein_coding protein_coding MGP_NODShiLtJ_T0071968.1 MGP_NODShiLtJ_G0029459.1 mouse_genomes_project 5 86381927 86404634 + MGP_NODShiLtJ_P0071968 Rest protein_coding protein_coding MGP_NODShiLtJ_T0014787.1 MGP_NODShiLtJ_G0012895.1 mouse_genomes_project 5 24959403 24960940 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008335.1 MGP_NODShiLtJ_G0006752.1 mouse_genomes_project 5 150733414 150738003 + Gm42626 lincRNA lincRNA MGP_NODShiLtJ_T0014756.1 MGP_NODShiLtJ_G0012864.1 mouse_genomes_project 5 19676524 19678193 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074564.1 MGP_NODShiLtJ_G0029979.1 mouse_genomes_project 5 153602471 153665609 + MGP_NODShiLtJ_P0074564 Baz1b protein_coding protein_coding MGP_NODShiLtJ_T0074565.1 MGP_NODShiLtJ_G0029979.1 mouse_genomes_project 5 153613509 153616527 + Baz1b protein_coding retained_intron MGP_NODShiLtJ_T0074566.1 MGP_NODShiLtJ_G0029979.1 mouse_genomes_project 5 153622053 153629149 + Baz1b protein_coding retained_intron MGP_NODShiLtJ_T0074567.1 MGP_NODShiLtJ_G0029979.1 mouse_genomes_project 5 153625696 153635288 + Baz1b protein_coding retained_intron MGP_NODShiLtJ_T0074568.1 MGP_NODShiLtJ_G0029979.1 mouse_genomes_project 5 153661868 153663662 + Baz1b protein_coding retained_intron MGP_NODShiLtJ_T0070783.1 MGP_NODShiLtJ_G0029260.1 mouse_genomes_project 5 35675051 35676632 + MGP_NODShiLtJ_P0070783 Gm1673 protein_coding protein_coding MGP_NODShiLtJ_T0070784.1 MGP_NODShiLtJ_G0029260.1 mouse_genomes_project 5 35675055 35676628 + Gm1673 protein_coding retained_intron MGP_NODShiLtJ_T0070785.1 MGP_NODShiLtJ_G0029260.1 mouse_genomes_project 5 35675088 35676628 + MGP_NODShiLtJ_P0070785 Gm1673 protein_coding protein_coding MGP_NODShiLtJ_T0070786.1 MGP_NODShiLtJ_G0029260.1 mouse_genomes_project 5 35675092 35676625 + MGP_NODShiLtJ_P0070786 Gm1673 protein_coding protein_coding MGP_NODShiLtJ_T0070787.1 MGP_NODShiLtJ_G0029260.1 mouse_genomes_project 5 35675128 35676629 + MGP_NODShiLtJ_P0070787 Gm1673 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070788.1 MGP_NODShiLtJ_G0029260.1 mouse_genomes_project 5 35675152 35676628 + MGP_NODShiLtJ_P0070788 Gm1673 protein_coding protein_coding MGP_NODShiLtJ_T0074936.1 MGP_NODShiLtJ_G0030048.1 mouse_genomes_project 5 156586969 156661419 - MGP_NODShiLtJ_P0074936 Pilra protein_coding protein_coding MGP_NODShiLtJ_T0074937.1 MGP_NODShiLtJ_G0030048.1 mouse_genomes_project 5 156590593 156638228 - MGP_NODShiLtJ_P0074937 Pilra protein_coding protein_coding MGP_NODShiLtJ_T0074938.1 MGP_NODShiLtJ_G0030048.1 mouse_genomes_project 5 156590693 156601893 - Pilra protein_coding retained_intron MGP_NODShiLtJ_T0074947.1 MGP_NODShiLtJ_G0030048.1 mouse_genomes_project 5 156657454 156660979 - MGP_NODShiLtJ_P0074947 Pilra protein_coding protein_coding MGP_NODShiLtJ_T0074948.1 MGP_NODShiLtJ_G0030048.1 mouse_genomes_project 5 156657814 156661073 - MGP_NODShiLtJ_P0074948 Pilra protein_coding protein_coding MGP_NODShiLtJ_T0001787.1 MGP_NODShiLtJ_G0001700.1 mouse_genomes_project 5 142931052 142933773 - TEC TEC MGP_NODShiLtJ_T0098045.1 MGP_NODShiLtJ_G0036457.1 mouse_genomes_project 5 57292713 57292827 - n-R5s172 rRNA rRNA MGP_NODShiLtJ_T0075286.1 MGP_NODShiLtJ_G0030123.1 mouse_genomes_project 5 162445877 162459141 + MGP_NODShiLtJ_P0075286 Fscn1 protein_coding protein_coding MGP_NODShiLtJ_T0075287.1 MGP_NODShiLtJ_G0030123.1 mouse_genomes_project 5 162445910 162459139 + MGP_NODShiLtJ_P0075287 Fscn1 protein_coding protein_coding MGP_NODShiLtJ_T0075288.1 MGP_NODShiLtJ_G0030123.1 mouse_genomes_project 5 162446377 162458126 + MGP_NODShiLtJ_P0075288 Fscn1 protein_coding protein_coding MGP_NODShiLtJ_T0075289.1 MGP_NODShiLtJ_G0030123.1 mouse_genomes_project 5 162448493 162456508 + Fscn1 protein_coding processed_transcript MGP_NODShiLtJ_T0075290.1 MGP_NODShiLtJ_G0030123.1 mouse_genomes_project 5 162448790 162457909 + Fscn1 protein_coding processed_transcript MGP_NODShiLtJ_T0075291.1 MGP_NODShiLtJ_G0030123.1 mouse_genomes_project 5 162450073 162456630 + Fscn1 protein_coding processed_transcript MGP_NODShiLtJ_T0075292.1 MGP_NODShiLtJ_G0030123.1 mouse_genomes_project 5 162456040 162457945 + Fscn1 protein_coding retained_intron MGP_NODShiLtJ_T0075577.1 MGP_NODShiLtJ_G0030191.1 mouse_genomes_project 5 167124708 167185634 - MGP_NODShiLtJ_P0075577 Lnx2 protein_coding protein_coding MGP_NODShiLtJ_T0075578.1 MGP_NODShiLtJ_G0030191.1 mouse_genomes_project 5 167126318 167127090 - Lnx2 protein_coding processed_transcript MGP_NODShiLtJ_T0015072.1 MGP_NODShiLtJ_G0013180.1 mouse_genomes_project 5 162971472 162972010 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0074940.1 MGP_NODShiLtJ_G0030050.1 mouse_genomes_project 5 156647842 156659765 - MGP_NODShiLtJ_P0074940 protein_coding protein_coding MGP_NODShiLtJ_T0074941.1 MGP_NODShiLtJ_G0030050.1 mouse_genomes_project 5 156647842 156661375 - MGP_NODShiLtJ_P0074941 protein_coding protein_coding MGP_NODShiLtJ_T0074945.1 MGP_NODShiLtJ_G0030050.1 mouse_genomes_project 5 156647844 156661375 - MGP_NODShiLtJ_P0074945 protein_coding protein_coding MGP_NODShiLtJ_T0074949.1 MGP_NODShiLtJ_G0030050.1 mouse_genomes_project 5 156657814 156660495 - MGP_NODShiLtJ_P0074949 protein_coding protein_coding MGP_NODShiLtJ_T0008322.1 MGP_NODShiLtJ_G0006746.1 mouse_genomes_project 5 146308054 146308927 + Gm42500 lincRNA lincRNA MGP_NODShiLtJ_T0072484.1 MGP_NODShiLtJ_G0029589.1 mouse_genomes_project 5 115051688 115070628 - MGP_NODShiLtJ_P0072484 Plac8 protein_coding protein_coding MGP_NODShiLtJ_T0072485.1 MGP_NODShiLtJ_G0029589.1 mouse_genomes_project 5 115051689 115061283 - MGP_NODShiLtJ_P0072485 Plac8 protein_coding protein_coding MGP_NODShiLtJ_T0072486.1 MGP_NODShiLtJ_G0029589.1 mouse_genomes_project 5 115051690 115061848 - MGP_NODShiLtJ_P0072486 Plac8 protein_coding protein_coding MGP_NODShiLtJ_T0072487.1 MGP_NODShiLtJ_G0029589.1 mouse_genomes_project 5 115060862 115070575 - Plac8 protein_coding retained_intron MGP_NODShiLtJ_T0099351.1 MGP_NODShiLtJ_G0037745.1 mouse_genomes_project 5 53871910 53872017 - Gm22618 snRNA snRNA MGP_NODShiLtJ_T0001705.1 MGP_NODShiLtJ_G0001619.1 mouse_genomes_project 5 121049551 121051813 + TEC TEC MGP_NODShiLtJ_T0098419.1 MGP_NODShiLtJ_G0036823.1 mouse_genomes_project 5 163812912 163816295 + Gm15708 sense_intronic sense_intronic MGP_NODShiLtJ_T0098420.1 MGP_NODShiLtJ_G0036823.1 mouse_genomes_project 5 163814697 163816263 + Gm15708 sense_intronic sense_intronic MGP_NODShiLtJ_T0014903.1 MGP_NODShiLtJ_G0013011.1 mouse_genomes_project 5 78853180 78853794 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004732.1 MGP_NODShiLtJ_G0004080.1 mouse_genomes_project 5 131901635 131902214 - 4930430O22Rik antisense antisense MGP_NODShiLtJ_T0004733.1 MGP_NODShiLtJ_G0004080.1 mouse_genomes_project 5 131901637 131902176 - 4930430O22Rik antisense antisense MGP_NODShiLtJ_T0008038.1 MGP_NODShiLtJ_G0006543.1 mouse_genomes_project 5 39948876 39951254 + Gm42505 lincRNA lincRNA MGP_NODShiLtJ_T0072900.1 MGP_NODShiLtJ_G0029685.1 mouse_genomes_project 5 126220116 126231851 - MGP_NODShiLtJ_P0072900 Pxmp2 protein_coding protein_coding MGP_NODShiLtJ_T0072901.1 MGP_NODShiLtJ_G0029685.1 mouse_genomes_project 5 126220129 126231686 - MGP_NODShiLtJ_P0072901 Pxmp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072902.1 MGP_NODShiLtJ_G0029685.1 mouse_genomes_project 5 126226457 126231667 - Pxmp2 protein_coding processed_transcript MGP_NODShiLtJ_T0072903.1 MGP_NODShiLtJ_G0029685.1 mouse_genomes_project 5 126229177 126231784 - Pxmp2 protein_coding retained_intron MGP_NODShiLtJ_T0073887.1 MGP_NODShiLtJ_G0029866.1 mouse_genomes_project 5 140597031 140682707 + Psmd9 protein_coding processed_transcript MGP_NODShiLtJ_T0073894.1 MGP_NODShiLtJ_G0029866.1 mouse_genomes_project 5 140669945 140688393 + Psmd9 protein_coding processed_transcript MGP_NODShiLtJ_T0073895.1 MGP_NODShiLtJ_G0029866.1 mouse_genomes_project 5 140669945 140694879 + MGP_NODShiLtJ_P0073895 Psmd9 protein_coding protein_coding MGP_NODShiLtJ_T0073896.1 MGP_NODShiLtJ_G0029866.1 mouse_genomes_project 5 140670013 140670782 + Psmd9 protein_coding retained_intron MGP_NODShiLtJ_T0073897.1 MGP_NODShiLtJ_G0029866.1 mouse_genomes_project 5 140670704 140672585 + Psmd9 protein_coding TEC MGP_NODShiLtJ_T0073898.1 MGP_NODShiLtJ_G0029866.1 mouse_genomes_project 5 140677716 140693270 + MGP_NODShiLtJ_P0073898 Psmd9 protein_coding protein_coding MGP_NODShiLtJ_T0073899.1 MGP_NODShiLtJ_G0029866.1 mouse_genomes_project 5 140684961 140693270 + MGP_NODShiLtJ_P0073899 Psmd9 protein_coding protein_coding MGP_NODShiLtJ_T0071663.1 MGP_NODShiLtJ_G0029404.1 mouse_genomes_project 5 77044276 77329448 - MGP_NODShiLtJ_P0071663 Kctd8 protein_coding protein_coding MGP_NODShiLtJ_T0071664.1 MGP_NODShiLtJ_G0029404.1 mouse_genomes_project 5 77269747 77329446 - MGP_NODShiLtJ_P0071664 Kctd8 protein_coding protein_coding MGP_NODShiLtJ_T0073002.1 MGP_NODShiLtJ_G0029704.1 mouse_genomes_project 5 128393630 128436679 + MGP_NODShiLtJ_P0073002 Tpst2 protein_coding protein_coding MGP_NODShiLtJ_T0073003.1 MGP_NODShiLtJ_G0029704.1 mouse_genomes_project 5 128393643 128430420 + Tpst2 protein_coding retained_intron MGP_NODShiLtJ_T0073004.1 MGP_NODShiLtJ_G0029704.1 mouse_genomes_project 5 128393646 128436673 + MGP_NODShiLtJ_P0073004 Tpst2 protein_coding protein_coding MGP_NODShiLtJ_T0073005.1 MGP_NODShiLtJ_G0029704.1 mouse_genomes_project 5 128405674 128429120 + MGP_NODShiLtJ_P0073005 Tpst2 protein_coding protein_coding MGP_NODShiLtJ_T0073006.1 MGP_NODShiLtJ_G0029704.1 mouse_genomes_project 5 128425263 128436275 + MGP_NODShiLtJ_P0073006 Tpst2 protein_coding protein_coding MGP_NODShiLtJ_T0073007.1 MGP_NODShiLtJ_G0029704.1 mouse_genomes_project 5 128429674 128431200 + MGP_NODShiLtJ_P0073007 Tpst2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0073008.1 MGP_NODShiLtJ_G0029704.1 mouse_genomes_project 5 128434213 128436282 + Tpst2 protein_coding retained_intron MGP_NODShiLtJ_T0099353.1 MGP_NODShiLtJ_G0037747.1 mouse_genomes_project 5 66808896 66809004 - Gm23331 snRNA snRNA MGP_NODShiLtJ_T0001695.1 MGP_NODShiLtJ_G0001609.1 mouse_genomes_project 5 116567127 116568472 + TEC TEC MGP_NODShiLtJ_T0001647.1 MGP_NODShiLtJ_G0001561.1 mouse_genomes_project 5 82060529 82061407 + TEC TEC MGP_NODShiLtJ_T0099337.1 MGP_NODShiLtJ_G0037731.1 mouse_genomes_project 5 23062910 23063017 - Gm22887 snRNA snRNA MGP_NODShiLtJ_T0014975.1 MGP_NODShiLtJ_G0013083.1 mouse_genomes_project 5 117045360 117046091 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001786.1 MGP_NODShiLtJ_G0001699.1 mouse_genomes_project 5 142125877 142127241 + TEC TEC MGP_NODShiLtJ_T0001531.1 MGP_NODShiLtJ_G0001447.1 mouse_genomes_project 5 52379950 52381897 - TEC TEC MGP_NODShiLtJ_T0071418.1 MGP_NODShiLtJ_G0029367.1 mouse_genomes_project 5 71163184 71229415 - MGP_NODShiLtJ_P0071418 Rell1 protein_coding protein_coding MGP_NODShiLtJ_T0071419.1 MGP_NODShiLtJ_G0029367.1 mouse_genomes_project 5 71163353 71229341 - MGP_NODShiLtJ_P0071419 Rell1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071420.1 MGP_NODShiLtJ_G0029367.1 mouse_genomes_project 5 71182945 71189350 - Rell1 protein_coding processed_transcript MGP_NODShiLtJ_T0071421.1 MGP_NODShiLtJ_G0029367.1 mouse_genomes_project 5 71185200 71189213 - Rell1 protein_coding retained_intron MGP_NODShiLtJ_T0071422.1 MGP_NODShiLtJ_G0029367.1 mouse_genomes_project 5 71219255 71229357 - Rell1 protein_coding processed_transcript MGP_NODShiLtJ_T0075446.1 MGP_NODShiLtJ_G0030157.1 mouse_genomes_project 5 164593837 164627633 - MGP_NODShiLtJ_P0075446 Kpna7 protein_coding protein_coding MGP_NODShiLtJ_T0075447.1 MGP_NODShiLtJ_G0030157.1 mouse_genomes_project 5 164594045 164626623 - MGP_NODShiLtJ_P0075447 Kpna7 protein_coding protein_coding MGP_NODShiLtJ_T0075448.1 MGP_NODShiLtJ_G0030157.1 mouse_genomes_project 5 164596018 164625018 - MGP_NODShiLtJ_P0075448 Kpna7 protein_coding protein_coding MGP_NODShiLtJ_T0075449.1 MGP_NODShiLtJ_G0030157.1 mouse_genomes_project 5 164604326 164619422 - Kpna7 protein_coding processed_transcript MGP_NODShiLtJ_T0075450.1 MGP_NODShiLtJ_G0030157.1 mouse_genomes_project 5 164615884 164624368 - MGP_NODShiLtJ_P0075450 Kpna7 protein_coding protein_coding MGP_NODShiLtJ_T0075451.1 MGP_NODShiLtJ_G0030157.1 mouse_genomes_project 5 164622020 164738665 - MGP_NODShiLtJ_P0075451 Kpna7 protein_coding protein_coding MGP_NODShiLtJ_T0001766.1 MGP_NODShiLtJ_G0001680.1 mouse_genomes_project 5 139508343 139510681 + TEC TEC MGP_NODShiLtJ_T0007970.1 MGP_NODShiLtJ_G0006502.1 mouse_genomes_project 5 2770120 2773268 + lincRNA lincRNA MGP_NODShiLtJ_T0004711.1 MGP_NODShiLtJ_G0004064.1 mouse_genomes_project 5 126095558 126096194 - Gm43136 antisense antisense MGP_NODShiLtJ_T0075032.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157232151 157253258 + MGP_NODShiLtJ_P0075032 Stag3 protein_coding protein_coding MGP_NODShiLtJ_T0075033.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157232420 157275728 + Stag3 protein_coding retained_intron MGP_NODShiLtJ_T0075034.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157232437 157275725 + Stag3 protein_coding retained_intron MGP_NODShiLtJ_T0075035.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157232437 157275728 + MGP_NODShiLtJ_P0075035 Stag3 protein_coding protein_coding MGP_NODShiLtJ_T0075036.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157232455 157275728 + MGP_NODShiLtJ_P0075036 Stag3 protein_coding protein_coding MGP_NODShiLtJ_T0075037.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157232467 157252913 + MGP_NODShiLtJ_P0075037 Stag3 protein_coding protein_coding MGP_NODShiLtJ_T0075038.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157262079 157264345 + Stag3 protein_coding processed_transcript MGP_NODShiLtJ_T0075039.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157267277 157272090 + MGP_NODShiLtJ_P0075039 Stag3 protein_coding protein_coding MGP_NODShiLtJ_T0075040.1 MGP_NODShiLtJ_G0030071.1 mouse_genomes_project 5 157272044 157275721 + MGP_NODShiLtJ_P0075040 Stag3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074667.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154614845 154646307 + MGP_NODShiLtJ_P0074667 Rasa4 protein_coding protein_coding MGP_NODShiLtJ_T0074668.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154614883 154646307 + Rasa4 protein_coding retained_intron MGP_NODShiLtJ_T0074669.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154614927 154646302 + Rasa4 protein_coding retained_intron MGP_NODShiLtJ_T0074670.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154614927 154644404 + Rasa4 protein_coding retained_intron MGP_NODShiLtJ_T0074671.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154614928 154627001 + Rasa4 protein_coding retained_intron MGP_NODShiLtJ_T0074672.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154614947 154646302 + Rasa4 protein_coding retained_intron MGP_NODShiLtJ_T0074673.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154614961 154646307 + MGP_NODShiLtJ_P0074673 Rasa4 protein_coding protein_coding MGP_NODShiLtJ_T0074674.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154615018 154641954 + Rasa4 protein_coding retained_intron MGP_NODShiLtJ_T0074675.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154615999 154624818 + Rasa4 protein_coding processed_transcript MGP_NODShiLtJ_T0074676.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154624655 154626125 + Rasa4 protein_coding retained_intron MGP_NODShiLtJ_T0074677.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154629140 154636738 + MGP_NODShiLtJ_P0074677 Rasa4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074678.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154638336 154640476 + MGP_NODShiLtJ_P0074678 Rasa4 protein_coding protein_coding MGP_NODShiLtJ_T0074679.1 MGP_NODShiLtJ_G0030001.1 mouse_genomes_project 5 154645378 154645977 + Rasa4 protein_coding retained_intron MGP_NODShiLtJ_T0075123.1 MGP_NODShiLtJ_G0030085.1 mouse_genomes_project 5 158495173 158600673 - MGP_NODShiLtJ_P0075123 3110082I17Rik protein_coding protein_coding MGP_NODShiLtJ_T0075124.1 MGP_NODShiLtJ_G0030085.1 mouse_genomes_project 5 158495173 158600698 - MGP_NODShiLtJ_P0075124 3110082I17Rik protein_coding protein_coding MGP_NODShiLtJ_T0075125.1 MGP_NODShiLtJ_G0030085.1 mouse_genomes_project 5 158500230 158600682 - 3110082I17Rik protein_coding retained_intron MGP_NODShiLtJ_T0075135.1 MGP_NODShiLtJ_G0030085.1 mouse_genomes_project 5 158553817 158595663 - 3110082I17Rik protein_coding processed_transcript MGP_NODShiLtJ_T0014775.1 MGP_NODShiLtJ_G0012883.1 mouse_genomes_project 5 23263900 23268553 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100624.1 MGP_NODShiLtJ_G0039018.1 mouse_genomes_project 5 94959038 94959166 - Gm24792 snoRNA snoRNA MGP_NODShiLtJ_T0073282.1 MGP_NODShiLtJ_G0029759.1 mouse_genomes_project 5 131565051 131582509 - MGP_NODShiLtJ_P0073282 Mlec protein_coding protein_coding MGP_NODShiLtJ_T0073283.1 MGP_NODShiLtJ_G0029759.1 mouse_genomes_project 5 131570172 131574415 - Mlec protein_coding processed_transcript MGP_NODShiLtJ_T0008316.1 MGP_NODShiLtJ_G0006741.1 mouse_genomes_project 5 144880875 144881663 + Gm43475 lincRNA lincRNA MGP_NODShiLtJ_T0071730.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81422396 81465819 - MGP_NODShiLtJ_P0071730 Txk protein_coding protein_coding MGP_NODShiLtJ_T0071731.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81422396 81481660 - MGP_NODShiLtJ_P0071731 Txk protein_coding protein_coding MGP_NODShiLtJ_T0071732.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81422396 81481664 - MGP_NODShiLtJ_P0071732 Txk protein_coding protein_coding MGP_NODShiLtJ_T0071733.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81422398 81481660 - MGP_NODShiLtJ_P0071733 Txk protein_coding protein_coding MGP_NODShiLtJ_T0071734.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81422404 81465123 - Txk protein_coding processed_transcript MGP_NODShiLtJ_T0071735.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81422404 81465123 - Txk protein_coding processed_transcript MGP_NODShiLtJ_T0071736.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81422991 81481581 - MGP_NODShiLtJ_P0071736 Txk protein_coding unknown_likely_coding MGP_NODShiLtJ_T0071737.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81429517 81481661 - Txk protein_coding retained_intron MGP_NODShiLtJ_T0071738.1 MGP_NODShiLtJ_G0029418.1 mouse_genomes_project 5 81477064 81481657 - Txk protein_coding retained_intron MGP_NODShiLtJ_T0072923.1 MGP_NODShiLtJ_G0029689.1 mouse_genomes_project 5 126323362 126414451 - MGP_NODShiLtJ_P0072923 Fbrsl1 protein_coding protein_coding MGP_NODShiLtJ_T0072924.1 MGP_NODShiLtJ_G0029689.1 mouse_genomes_project 5 126323369 126414787 - MGP_NODShiLtJ_P0072924 Fbrsl1 protein_coding protein_coding MGP_NODShiLtJ_T0072925.1 MGP_NODShiLtJ_G0029689.1 mouse_genomes_project 5 126324406 126414770 - MGP_NODShiLtJ_P0072925 Fbrsl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0072926.1 MGP_NODShiLtJ_G0029689.1 mouse_genomes_project 5 126340539 126396815 - MGP_NODShiLtJ_P0072926 Fbrsl1 protein_coding protein_coding MGP_NODShiLtJ_T0072927.1 MGP_NODShiLtJ_G0029689.1 mouse_genomes_project 5 126393675 126395663 - Fbrsl1 protein_coding processed_transcript MGP_NODShiLtJ_T0072928.1 MGP_NODShiLtJ_G0029689.1 mouse_genomes_project 5 126395795 126397122 - Fbrsl1 protein_coding processed_transcript MGP_NODShiLtJ_T0072929.1 MGP_NODShiLtJ_G0029689.1 mouse_genomes_project 5 126395795 126414787 - MGP_NODShiLtJ_P0072929 Fbrsl1 protein_coding protein_coding MGP_NODShiLtJ_T0074614.1 MGP_NODShiLtJ_G0029990.1 mouse_genomes_project 5 154215518 154224506 - MGP_NODShiLtJ_P0074614 Tmem120a protein_coding protein_coding MGP_NODShiLtJ_T0074615.1 MGP_NODShiLtJ_G0029990.1 mouse_genomes_project 5 154215537 154216624 - Tmem120a protein_coding retained_intron MGP_NODShiLtJ_T0074616.1 MGP_NODShiLtJ_G0029990.1 mouse_genomes_project 5 154215571 154217270 - Tmem120a protein_coding processed_transcript MGP_NODShiLtJ_T0074617.1 MGP_NODShiLtJ_G0029990.1 mouse_genomes_project 5 154216288 154222457 - Tmem120a protein_coding retained_intron MGP_NODShiLtJ_T0074618.1 MGP_NODShiLtJ_G0029990.1 mouse_genomes_project 5 154217241 154224266 - MGP_NODShiLtJ_P0074618 Tmem120a protein_coding protein_coding MGP_NODShiLtJ_T0071435.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72138291 72169492 + MGP_NODShiLtJ_P0071435 Klf3 protein_coding protein_coding MGP_NODShiLtJ_T0071436.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72139168 72158658 + Klf3 protein_coding retained_intron MGP_NODShiLtJ_T0071437.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72139213 72157721 + Klf3 protein_coding processed_transcript MGP_NODShiLtJ_T0071438.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72147903 72166099 + MGP_NODShiLtJ_P0071438 Klf3 protein_coding protein_coding MGP_NODShiLtJ_T0071439.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72147904 72154877 + Klf3 protein_coding retained_intron MGP_NODShiLtJ_T0071440.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72147948 72157792 + MGP_NODShiLtJ_P0071440 Klf3 protein_coding protein_coding MGP_NODShiLtJ_T0071441.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72151421 72162049 + Klf3 protein_coding retained_intron MGP_NODShiLtJ_T0071442.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72157896 72163784 + MGP_NODShiLtJ_P0071442 Klf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071443.1 MGP_NODShiLtJ_G0029370.1 mouse_genomes_project 5 72163424 72166167 + MGP_NODShiLtJ_P0071443 Klf3 protein_coding protein_coding MGP_NODShiLtJ_T0004641.1 MGP_NODShiLtJ_G0004014.1 mouse_genomes_project 5 57508927 57509896 - Gm42747 antisense antisense MGP_NODShiLtJ_T0072837.1 MGP_NODShiLtJ_G0029666.1 mouse_genomes_project 5 124169990 124193178 - MGP_NODShiLtJ_P0072837 protein_coding protein_coding MGP_NODShiLtJ_T0072838.1 MGP_NODShiLtJ_G0029666.1 mouse_genomes_project 5 124170071 124193141 - MGP_NODShiLtJ_P0072838 protein_coding protein_coding MGP_NODShiLtJ_T0072839.1 MGP_NODShiLtJ_G0029666.1 mouse_genomes_project 5 124170510 124220059 - MGP_NODShiLtJ_P0072839 protein_coding protein_coding MGP_NODShiLtJ_T0072840.1 MGP_NODShiLtJ_G0029666.1 mouse_genomes_project 5 124172343 124191671 - MGP_NODShiLtJ_P0072840 protein_coding protein_coding MGP_NODShiLtJ_T0075004.1 MGP_NODShiLtJ_G0030063.1 mouse_genomes_project 5 157039149 157045537 + MGP_NODShiLtJ_P0075004 Cnpy4 protein_coding protein_coding MGP_NODShiLtJ_T0075005.1 MGP_NODShiLtJ_G0030063.1 mouse_genomes_project 5 157041534 157044216 + MGP_NODShiLtJ_P0075005 Cnpy4 protein_coding protein_coding MGP_NODShiLtJ_T0075006.1 MGP_NODShiLtJ_G0030063.1 mouse_genomes_project 5 157041729 157043769 + Cnpy4 protein_coding retained_intron MGP_NODShiLtJ_T0069658.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 624201 698783 + MGP_NODShiLtJ_P0069658 Krit1 protein_coding protein_coding MGP_NODShiLtJ_T0069659.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 624202 636864 + Krit1 protein_coding retained_intron MGP_NODShiLtJ_T0069660.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 624206 698783 + MGP_NODShiLtJ_P0069660 Krit1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0069661.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 624207 703006 + MGP_NODShiLtJ_P0069661 Krit1 protein_coding protein_coding MGP_NODShiLtJ_T0069662.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 624217 701746 + MGP_NODShiLtJ_P0069662 Krit1 protein_coding protein_coding MGP_NODShiLtJ_T0069663.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 625258 632939 + MGP_NODShiLtJ_P0069663 Krit1 protein_coding protein_coding MGP_NODShiLtJ_T0069664.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 626375 636657 + Krit1 protein_coding retained_intron MGP_NODShiLtJ_T0069665.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 638742 646197 + Krit1 protein_coding retained_intron MGP_NODShiLtJ_T0069666.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 641700 662250 + Krit1 protein_coding retained_intron MGP_NODShiLtJ_T0069667.1 MGP_NODShiLtJ_G0029066.1 mouse_genomes_project 5 665005 667108 + Krit1 protein_coding retained_intron MGP_NODShiLtJ_T0071642.1 MGP_NODShiLtJ_G0029399.1 mouse_genomes_project 5 75224271 75230394 + MGP_NODShiLtJ_P0071642 Shisa3 protein_coding protein_coding MGP_NODShiLtJ_T0071643.1 MGP_NODShiLtJ_G0029399.1 mouse_genomes_project 5 75224358 75241175 + MGP_NODShiLtJ_P0071643 Shisa3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099377.1 MGP_NODShiLtJ_G0037771.1 mouse_genomes_project 5 114336440 114336539 - Gm22838 snRNA snRNA MGP_NODShiLtJ_T0001546.1 MGP_NODShiLtJ_G0001462.1 mouse_genomes_project 5 53041529 53044638 - TEC TEC MGP_NODShiLtJ_T0008291.1 MGP_NODShiLtJ_G0006726.1 mouse_genomes_project 5 140618973 140621133 - Gm43409 lincRNA lincRNA MGP_NODShiLtJ_T0014923.1 MGP_NODShiLtJ_G0013031.1 mouse_genomes_project 5 86450137 86450420 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0071001.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38371841 38474104 - MGP_NODShiLtJ_P0071001 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071002.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38371841 38466626 - MGP_NODShiLtJ_P0071002 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071003.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38371841 38474698 - MGP_NODShiLtJ_P0071003 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071004.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38371842 38416928 - MGP_NODShiLtJ_P0071004 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071005.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38371845 38417907 - MGP_NODShiLtJ_P0071005 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071006.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38371845 38474093 - MGP_NODShiLtJ_P0071006 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071007.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38374790 38391040 - MGP_NODShiLtJ_P0071007 Tbc1d14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071008.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38374908 38478554 - MGP_NODShiLtJ_P0071008 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071009.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38374910 38478546 - MGP_NODShiLtJ_P0071009 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071010.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38374915 38375587 - Tbc1d14 protein_coding processed_transcript MGP_NODShiLtJ_T0071011.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38375115 38463844 - MGP_NODShiLtJ_P0071011 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071012.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38375183 38416853 - MGP_NODShiLtJ_P0071012 Tbc1d14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071013.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38378123 38405899 - Tbc1d14 protein_coding retained_intron MGP_NODShiLtJ_T0071014.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38404709 38416824 - MGP_NODShiLtJ_P0071014 Tbc1d14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0071015.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38410353 38416812 - Tbc1d14 protein_coding processed_transcript MGP_NODShiLtJ_T0071016.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38428613 38474691 - Tbc1d14 protein_coding retained_intron MGP_NODShiLtJ_T0071017.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38430490 38450686 - Tbc1d14 protein_coding processed_transcript MGP_NODShiLtJ_T0071018.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38430552 38465794 - MGP_NODShiLtJ_P0071018 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071019.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38457791 38478513 - Tbc1d14 protein_coding retained_intron MGP_NODShiLtJ_T0071020.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38463843 38478513 - MGP_NODShiLtJ_P0071020 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071021.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38464087 38487307 - MGP_NODShiLtJ_P0071021 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0071022.1 MGP_NODShiLtJ_G0029295.1 mouse_genomes_project 5 38464315 38487332 - MGP_NODShiLtJ_P0071022 Tbc1d14 protein_coding protein_coding MGP_NODShiLtJ_T0001733.1 MGP_NODShiLtJ_G0001647.1 mouse_genomes_project 5 131380168 131380727 + TEC TEC MGP_NODShiLtJ_T0008079.1 MGP_NODShiLtJ_G0006580.1 mouse_genomes_project 5 71782751 71789716 + C030018K13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008080.1 MGP_NODShiLtJ_G0006580.1 mouse_genomes_project 5 71782757 71785494 + C030018K13Rik lincRNA lincRNA MGP_NODShiLtJ_T0008081.1 MGP_NODShiLtJ_G0006580.1 mouse_genomes_project 5 71782778 71788214 + C030018K13Rik lincRNA lincRNA MGP_NODShiLtJ_T0070648.1 MGP_NODShiLtJ_G0029238.1 mouse_genomes_project 5 34006007 34087897 + MGP_NODShiLtJ_P0070648 Yes1 protein_coding protein_coding MGP_NODShiLtJ_T0070649.1 MGP_NODShiLtJ_G0029238.1 mouse_genomes_project 5 34006220 34010013 + Yes1 protein_coding retained_intron MGP_NODShiLtJ_T0070650.1 MGP_NODShiLtJ_G0029238.1 mouse_genomes_project 5 34037329 34058187 + MGP_NODShiLtJ_P0070650 Yes1 protein_coding protein_coding MGP_NODShiLtJ_T0001737.1 MGP_NODShiLtJ_G0001651.1 mouse_genomes_project 5 132394126 132396402 + TEC TEC MGP_NODShiLtJ_T0075683.1 MGP_NODShiLtJ_G0030211.1 mouse_genomes_project 5 169845516 169880258 + MGP_NODShiLtJ_P0075683 Tex26 protein_coding protein_coding MGP_NODShiLtJ_T0075684.1 MGP_NODShiLtJ_G0030211.1 mouse_genomes_project 5 169845538 169846858 + Tex26 protein_coding processed_transcript MGP_NODShiLtJ_T0075685.1 MGP_NODShiLtJ_G0030211.1 mouse_genomes_project 5 169845562 169880258 + MGP_NODShiLtJ_P0075685 Tex26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075686.1 MGP_NODShiLtJ_G0030211.1 mouse_genomes_project 5 169845571 169880170 + MGP_NODShiLtJ_P0075686 Tex26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075687.1 MGP_NODShiLtJ_G0030211.1 mouse_genomes_project 5 169845575 169880170 + MGP_NODShiLtJ_P0075687 Tex26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075688.1 MGP_NODShiLtJ_G0030211.1 mouse_genomes_project 5 169845583 169880076 + MGP_NODShiLtJ_P0075688 Tex26 protein_coding protein_coding MGP_NODShiLtJ_T0071073.1 MGP_NODShiLtJ_G0029304.1 mouse_genomes_project 5 39254013 39343722 + MGP_NODShiLtJ_P0071073 Evc2 protein_coding protein_coding MGP_NODShiLtJ_T0071074.1 MGP_NODShiLtJ_G0029304.1 mouse_genomes_project 5 39254122 39306582 + Evc2 protein_coding retained_intron MGP_NODShiLtJ_T0071075.1 MGP_NODShiLtJ_G0029304.1 mouse_genomes_project 5 39308699 39310818 + Evc2 protein_coding processed_transcript MGP_NODShiLtJ_T0071076.1 MGP_NODShiLtJ_G0029304.1 mouse_genomes_project 5 39334530 39336587 + Evc2 protein_coding retained_intron MGP_NODShiLtJ_T0074520.1 MGP_NODShiLtJ_G0029972.1 mouse_genomes_project 5 153410098 153454382 + MGP_NODShiLtJ_P0074520 Stx1a protein_coding protein_coding MGP_NODShiLtJ_T0074521.1 MGP_NODShiLtJ_G0029972.1 mouse_genomes_project 5 153410123 153445637 + MGP_NODShiLtJ_P0074521 Stx1a protein_coding protein_coding MGP_NODShiLtJ_T0074522.1 MGP_NODShiLtJ_G0029972.1 mouse_genomes_project 5 153410176 153454382 + MGP_NODShiLtJ_P0074522 Stx1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0074523.1 MGP_NODShiLtJ_G0029972.1 mouse_genomes_project 5 153437550 153450622 + Stx1a protein_coding processed_transcript MGP_NODShiLtJ_T0074524.1 MGP_NODShiLtJ_G0029972.1 mouse_genomes_project 5 153441099 153454381 + Stx1a protein_coding retained_intron MGP_NODShiLtJ_T0074525.1 MGP_NODShiLtJ_G0029972.1 mouse_genomes_project 5 153441305 153450731 + Stx1a protein_coding processed_transcript MGP_NODShiLtJ_T0073275.1 MGP_NODShiLtJ_G0029757.1 mouse_genomes_project 5 131528323 131538746 - Acads protein_coding retained_intron MGP_NODShiLtJ_T0073276.1 MGP_NODShiLtJ_G0029757.1 mouse_genomes_project 5 131528323 131538805 - MGP_NODShiLtJ_P0073276 Acads protein_coding protein_coding MGP_NODShiLtJ_T0073277.1 MGP_NODShiLtJ_G0029757.1 mouse_genomes_project 5 131530020 131538769 - Acads protein_coding processed_transcript MGP_NODShiLtJ_T0073278.1 MGP_NODShiLtJ_G0029757.1 mouse_genomes_project 5 131530808 131538734 - Acads protein_coding retained_intron MGP_NODShiLtJ_T0014842.1 MGP_NODShiLtJ_G0012950.1 mouse_genomes_project 5 44368267 44369159 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004729.1 MGP_NODShiLtJ_G0004079.1 mouse_genomes_project 5 131372542 131375160 + Hnf1aos2 antisense antisense MGP_NODShiLtJ_T0100632.1 MGP_NODShiLtJ_G0039026.1 mouse_genomes_project 5 114281900 114281976 + Gm26252 snoRNA snoRNA MGP_NODShiLtJ_T0072131.1 MGP_NODShiLtJ_G0029511.1 mouse_genomes_project 5 101342173 101427746 + MGP_NODShiLtJ_P0072131 Rufy3 protein_coding protein_coding MGP_NODShiLtJ_T0072132.1 MGP_NODShiLtJ_G0029511.1 mouse_genomes_project 5 101342173 101436377 + MGP_NODShiLtJ_P0072132 Rufy3 protein_coding protein_coding MGP_NODShiLtJ_T0072133.1 MGP_NODShiLtJ_G0029511.1 mouse_genomes_project 5 101362611 101425978 + MGP_NODShiLtJ_P0072133 Rufy3 protein_coding protein_coding MGP_NODShiLtJ_T0072134.1 MGP_NODShiLtJ_G0029511.1 mouse_genomes_project 5 101362634 101427747 + MGP_NODShiLtJ_P0072134 Rufy3 protein_coding protein_coding MGP_NODShiLtJ_T0072135.1 MGP_NODShiLtJ_G0029511.1 mouse_genomes_project 5 101362675 101365011 + Rufy3 protein_coding retained_intron MGP_NODShiLtJ_T0072136.1 MGP_NODShiLtJ_G0029511.1 mouse_genomes_project 5 101362676 101396130 + Rufy3 protein_coding retained_intron MGP_NODShiLtJ_T0072137.1 MGP_NODShiLtJ_G0029511.1 mouse_genomes_project 5 101362892 101425979 + MGP_NODShiLtJ_P0072137 Rufy3 protein_coding protein_coding MGP_NODShiLtJ_T0072138.1 MGP_NODShiLtJ_G0029511.1 mouse_genomes_project 5 101431741 101433369 + Rufy3 protein_coding retained_intron MGP_NODShiLtJ_T0001810.1 MGP_NODShiLtJ_G0001723.1 mouse_genomes_project 5 149762675 149763992 - TEC TEC MGP_NODShiLtJ_T0073571.1 MGP_NODShiLtJ_G0029816.1 mouse_genomes_project 5 137912669 137933553 + MGP_NODShiLtJ_P0073571 Oas1f protein_coding protein_coding MGP_NODShiLtJ_T0070223.1 MGP_NODShiLtJ_G0029168.1 mouse_genomes_project 5 28730600 28785296 - MGP_NODShiLtJ_P0070223 Paxip1 protein_coding protein_coding MGP_NODShiLtJ_T0070224.1 MGP_NODShiLtJ_G0029168.1 mouse_genomes_project 5 28734605 28743343 - Paxip1 protein_coding retained_intron MGP_NODShiLtJ_T0070225.1 MGP_NODShiLtJ_G0029168.1 mouse_genomes_project 5 28753479 28759485 - Paxip1 protein_coding retained_intron MGP_NODShiLtJ_T0070226.1 MGP_NODShiLtJ_G0029168.1 mouse_genomes_project 5 28766226 28785141 - MGP_NODShiLtJ_P0070226 Paxip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0070227.1 MGP_NODShiLtJ_G0029168.1 mouse_genomes_project 5 28775196 28785437 - Paxip1 protein_coding processed_transcript MGP_NODShiLtJ_T0070228.1 MGP_NODShiLtJ_G0029168.1 mouse_genomes_project 5 28777326 28785129 - Paxip1 protein_coding retained_intron MGP_NODShiLtJ_T0070229.1 MGP_NODShiLtJ_G0029168.1 mouse_genomes_project 5 28780292 28784119 - Paxip1 protein_coding retained_intron MGP_NODShiLtJ_T0015054.1 MGP_NODShiLtJ_G0013162.1 mouse_genomes_project 5 156682202 156682954 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076966.1 MGP_NODShiLtJ_G0030490.1 mouse_genomes_project 6 52662090 52670629 + Zfp398 protein_coding retained_intron MGP_NODShiLtJ_T0076967.1 MGP_NODShiLtJ_G0030490.1 mouse_genomes_project 6 52662093 52689942 + MGP_NODShiLtJ_P0076967 Zfp398 protein_coding protein_coding MGP_NODShiLtJ_T0076968.1 MGP_NODShiLtJ_G0030490.1 mouse_genomes_project 6 52662124 52695778 + MGP_NODShiLtJ_P0076968 Zfp398 protein_coding protein_coding MGP_NODShiLtJ_T0015380.1 MGP_NODShiLtJ_G0013488.1 mouse_genomes_project 6 110078086 110078338 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008660.1 MGP_NODShiLtJ_G0006995.1 mouse_genomes_project 6 145106881 145109861 - Gm44067 lincRNA lincRNA MGP_NODShiLtJ_T0079902.1 MGP_NODShiLtJ_G0031109.1 mouse_genomes_project 6 142486542 142489502 - MGP_NODShiLtJ_P0079902 Kcna5 protein_coding protein_coding MGP_NODShiLtJ_T0002642.1 MGP_NODShiLtJ_G0002523.1 mouse_genomes_project 6 44579670 44580124 + MGP_NODShiLtJ_P0002642 Trbv23 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002643.1 MGP_NODShiLtJ_G0002523.1 mouse_genomes_project 6 44579670 44580124 + MGP_NODShiLtJ_P0002643 Trbv23 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0004938.1 MGP_NODShiLtJ_G0004228.1 mouse_genomes_project 6 94755243 94775194 - Vax2os antisense antisense MGP_NODShiLtJ_T0004939.1 MGP_NODShiLtJ_G0004228.1 mouse_genomes_project 6 94762538 94773919 - Vax2os antisense antisense MGP_NODShiLtJ_T0004940.1 MGP_NODShiLtJ_G0004228.1 mouse_genomes_project 6 94765116 94766530 - Vax2os antisense antisense MGP_NODShiLtJ_T0004941.1 MGP_NODShiLtJ_G0004228.1 mouse_genomes_project 6 94765466 94766609 - Vax2os antisense antisense MGP_NODShiLtJ_T0102015.1 MGP_NODShiLtJ_G0040183.1 mouse_genomes_project 6 97466277 97467320 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0080096.1 MGP_NODShiLtJ_G0031160.1 mouse_genomes_project 6 145993688 146006122 + MGP_NODShiLtJ_P0080096 Klrd1 protein_coding protein_coding MGP_NODShiLtJ_T0080097.1 MGP_NODShiLtJ_G0031160.1 mouse_genomes_project 6 145993688 146005816 + MGP_NODShiLtJ_P0080097 Klrd1 protein_coding protein_coding MGP_NODShiLtJ_T0080098.1 MGP_NODShiLtJ_G0031160.1 mouse_genomes_project 6 145993716 146006117 + MGP_NODShiLtJ_P0080098 Klrd1 protein_coding protein_coding MGP_NODShiLtJ_T0080099.1 MGP_NODShiLtJ_G0031160.1 mouse_genomes_project 6 145993731 146005960 + MGP_NODShiLtJ_P0080099 Klrd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080100.1 MGP_NODShiLtJ_G0031160.1 mouse_genomes_project 6 145997184 146005800 + MGP_NODShiLtJ_P0080100 Klrd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080101.1 MGP_NODShiLtJ_G0031160.1 mouse_genomes_project 6 146002601 146005799 + Klrd1 protein_coding retained_intron MGP_NODShiLtJ_T0079164.1 MGP_NODShiLtJ_G0030968.1 mouse_genomes_project 6 130546381 130551641 + MGP_NODShiLtJ_P0079164 H1foo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079165.1 MGP_NODShiLtJ_G0030968.1 mouse_genomes_project 6 130546381 130551646 + MGP_NODShiLtJ_P0079165 H1foo protein_coding protein_coding MGP_NODShiLtJ_T0079166.1 MGP_NODShiLtJ_G0030968.1 mouse_genomes_project 6 130546381 130551641 + MGP_NODShiLtJ_P0079166 H1foo protein_coding protein_coding MGP_NODShiLtJ_T0079167.1 MGP_NODShiLtJ_G0030968.1 mouse_genomes_project 6 130546396 130551331 + MGP_NODShiLtJ_P0079167 H1foo protein_coding protein_coding MGP_NODShiLtJ_T0079168.1 MGP_NODShiLtJ_G0030968.1 mouse_genomes_project 6 130550166 130551635 + MGP_NODShiLtJ_P0079168 H1foo protein_coding protein_coding MGP_NODShiLtJ_T0008488.1 MGP_NODShiLtJ_G0006860.1 mouse_genomes_project 6 37938326 37944302 + 1700065J11Rik lincRNA lincRNA MGP_NODShiLtJ_T0080022.1 MGP_NODShiLtJ_G0031136.1 mouse_genomes_project 6 144657709 144662353 - BC048546 protein_coding retained_intron MGP_NODShiLtJ_T0080023.1 MGP_NODShiLtJ_G0031136.1 mouse_genomes_project 6 144657715 144706053 - MGP_NODShiLtJ_P0080023 BC048546 protein_coding protein_coding MGP_NODShiLtJ_T0080024.1 MGP_NODShiLtJ_G0031136.1 mouse_genomes_project 6 144667346 144672164 - BC048546 protein_coding retained_intron MGP_NODShiLtJ_T0080025.1 MGP_NODShiLtJ_G0031136.1 mouse_genomes_project 6 144678174 144679408 - BC048546 protein_coding retained_intron MGP_NODShiLtJ_T0080026.1 MGP_NODShiLtJ_G0031136.1 mouse_genomes_project 6 144695047 144697638 - BC048546 protein_coding retained_intron MGP_NODShiLtJ_T0076894.1 MGP_NODShiLtJ_G0030467.1 mouse_genomes_project 6 46327516 46328470 + MGP_NODShiLtJ_P0076894 Olfr38 protein_coding protein_coding MGP_NODShiLtJ_T0079919.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142905836 142929943 - MGP_NODShiLtJ_P0079919 Rad51ap1 protein_coding protein_coding MGP_NODShiLtJ_T0079920.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142906201 142908599 - Rad51ap1 protein_coding retained_intron MGP_NODShiLtJ_T0079921.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142906201 142929943 - MGP_NODShiLtJ_P0079921 Rad51ap1 protein_coding protein_coding MGP_NODShiLtJ_T0079922.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142906965 142908505 - Rad51ap1 protein_coding processed_transcript MGP_NODShiLtJ_T0079923.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142907776 142911042 - Rad51ap1 protein_coding retained_intron MGP_NODShiLtJ_T0079924.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142909131 142929927 - MGP_NODShiLtJ_P0079924 Rad51ap1 protein_coding protein_coding MGP_NODShiLtJ_T0079925.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142909147 142910880 - Rad51ap1 protein_coding retained_intron MGP_NODShiLtJ_T0079926.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142910416 142929902 - Rad51ap1 protein_coding processed_transcript MGP_NODShiLtJ_T0079927.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142910878 142929931 - MGP_NODShiLtJ_P0079927 Rad51ap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079928.1 MGP_NODShiLtJ_G0031115.1 mouse_genomes_project 6 142911449 142929943 - Rad51ap1 protein_coding retained_intron MGP_NODShiLtJ_T0102019.1 MGP_NODShiLtJ_G0040187.1 mouse_genomes_project 6 101438558 101439500 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004926.1 MGP_NODShiLtJ_G0004221.1 mouse_genomes_project 6 90487717 90594268 - Gm4409 antisense antisense MGP_NODShiLtJ_T0015414.1 MGP_NODShiLtJ_G0013522.1 mouse_genomes_project 6 126797005 126797473 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079553.1 MGP_NODShiLtJ_G0031034.1 mouse_genomes_project 6 138008151 138012388 - MGP_NODShiLtJ_P0079553 Gdf3 protein_coding protein_coding MGP_NODShiLtJ_T0079554.1 MGP_NODShiLtJ_G0031034.1 mouse_genomes_project 6 138010327 138012125 - Gdf3 protein_coding processed_transcript MGP_NODShiLtJ_T0010657.1 MGP_NODShiLtJ_G0008790.1 mouse_genomes_project 6 39541643 39541790 + Gm25111 miRNA miRNA MGP_NODShiLtJ_T0078289.1 MGP_NODShiLtJ_G0030796.1 mouse_genomes_project 6 98776624 98782308 - MGP_NODShiLtJ_P0078289 Gkn3 protein_coding protein_coding MGP_NODShiLtJ_T0080440.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158868736 158928628 + MGP_NODShiLtJ_P0080440 Aebp2 protein_coding protein_coding MGP_NODShiLtJ_T0080441.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158868742 158899203 + MGP_NODShiLtJ_P0080441 Aebp2 protein_coding protein_coding MGP_NODShiLtJ_T0080442.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158869345 158927574 + MGP_NODShiLtJ_P0080442 Aebp2 protein_coding protein_coding MGP_NODShiLtJ_T0080443.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158869956 158901738 + MGP_NODShiLtJ_P0080443 Aebp2 protein_coding protein_coding MGP_NODShiLtJ_T0080444.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158871848 158902820 + MGP_NODShiLtJ_P0080444 Aebp2 protein_coding protein_coding MGP_NODShiLtJ_T0080445.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158884121 158885552 + Aebp2 protein_coding retained_intron MGP_NODShiLtJ_T0080446.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158885135 158904412 + MGP_NODShiLtJ_P0080446 Aebp2 protein_coding protein_coding MGP_NODShiLtJ_T0080447.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158891729 158902024 + Aebp2 protein_coding processed_transcript MGP_NODShiLtJ_T0080448.1 MGP_NODShiLtJ_G0031261.1 mouse_genomes_project 6 158895233 158896807 + Aebp2 protein_coding processed_transcript MGP_NODShiLtJ_T0004990.1 MGP_NODShiLtJ_G0004258.1 mouse_genomes_project 6 113682887 113694481 + Gm26911 antisense antisense MGP_NODShiLtJ_T0004991.1 MGP_NODShiLtJ_G0004258.1 mouse_genomes_project 6 113682904 113704338 + Gm26911 antisense antisense MGP_NODShiLtJ_T0004992.1 MGP_NODShiLtJ_G0004258.1 mouse_genomes_project 6 113682976 113693097 + Gm26911 antisense antisense MGP_NODShiLtJ_T0078100.1 MGP_NODShiLtJ_G0030760.1 mouse_genomes_project 6 96668344 96673768 + MGP_NODShiLtJ_P0078100 Noto protein_coding protein_coding MGP_NODShiLtJ_T0078101.1 MGP_NODShiLtJ_G0030760.1 mouse_genomes_project 6 96668526 96673169 + MGP_NODShiLtJ_P0078101 Noto protein_coding protein_coding MGP_NODShiLtJ_T0079542.1 MGP_NODShiLtJ_G0031032.1 mouse_genomes_project 6 137940017 137951281 + MGP_NODShiLtJ_P0079542 Aicda protein_coding protein_coding MGP_NODShiLtJ_T0079543.1 MGP_NODShiLtJ_G0031032.1 mouse_genomes_project 6 137947582 137950177 + MGP_NODShiLtJ_P0079543 Aicda protein_coding protein_coding MGP_NODShiLtJ_T0080529.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161537399 161637153 - MGP_NODShiLtJ_P0080529 C2cd5 protein_coding protein_coding MGP_NODShiLtJ_T0080530.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161537399 161637153 - MGP_NODShiLtJ_P0080530 C2cd5 protein_coding protein_coding MGP_NODShiLtJ_T0080531.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161537404 161637136 - MGP_NODShiLtJ_P0080531 C2cd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080532.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161537407 161636822 - MGP_NODShiLtJ_P0080532 C2cd5 protein_coding protein_coding MGP_NODShiLtJ_T0080533.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161537961 161636813 - MGP_NODShiLtJ_P0080533 C2cd5 protein_coding protein_coding MGP_NODShiLtJ_T0080534.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161538212 161637117 - MGP_NODShiLtJ_P0080534 C2cd5 protein_coding protein_coding MGP_NODShiLtJ_T0080535.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161538218 161540192 - C2cd5 protein_coding retained_intron MGP_NODShiLtJ_T0080536.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161538416 161637051 - MGP_NODShiLtJ_P0080536 C2cd5 protein_coding protein_coding MGP_NODShiLtJ_T0080537.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161544746 161547739 - C2cd5 protein_coding retained_intron MGP_NODShiLtJ_T0080538.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161556800 161637153 - C2cd5 protein_coding retained_intron MGP_NODShiLtJ_T0080539.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161573014 161601043 - MGP_NODShiLtJ_P0080539 C2cd5 protein_coding protein_coding MGP_NODShiLtJ_T0080540.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161579021 161582366 - C2cd5 protein_coding retained_intron MGP_NODShiLtJ_T0080541.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161605144 161636895 - C2cd5 protein_coding retained_intron MGP_NODShiLtJ_T0080542.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161607888 161617318 - C2cd5 protein_coding processed_transcript MGP_NODShiLtJ_T0080543.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161613233 161615213 - C2cd5 protein_coding retained_intron MGP_NODShiLtJ_T0080544.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161613600 161637187 - MGP_NODShiLtJ_P0080544 C2cd5 protein_coding protein_coding MGP_NODShiLtJ_T0080545.1 MGP_NODShiLtJ_G0031284.1 mouse_genomes_project 6 161618748 161637124 - C2cd5 protein_coding retained_intron MGP_NODShiLtJ_T0010652.1 MGP_NODShiLtJ_G0008785.1 mouse_genomes_project 6 32383856 32383926 - Mir183 miRNA miRNA MGP_NODShiLtJ_T0015317.1 MGP_NODShiLtJ_G0013425.1 mouse_genomes_project 6 82525697 82526125 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008533.1 MGP_NODShiLtJ_G0006889.1 mouse_genomes_project 6 59130653 59132830 + Gm16499 lincRNA lincRNA MGP_NODShiLtJ_T0008534.1 MGP_NODShiLtJ_G0006889.1 mouse_genomes_project 6 59130654 59130720 + Gm16499 lincRNA lincRNA MGP_NODShiLtJ_T0080264.1 MGP_NODShiLtJ_G0031228.1 mouse_genomes_project 6 152727080 152737685 - MGP_NODShiLtJ_P0080264 Gsg1 protein_coding protein_coding MGP_NODShiLtJ_T0080265.1 MGP_NODShiLtJ_G0031228.1 mouse_genomes_project 6 152727083 152743855 - MGP_NODShiLtJ_P0080265 Gsg1 protein_coding protein_coding MGP_NODShiLtJ_T0080266.1 MGP_NODShiLtJ_G0031228.1 mouse_genomes_project 6 152727083 152744011 - MGP_NODShiLtJ_P0080266 Gsg1 protein_coding protein_coding MGP_NODShiLtJ_T0080267.1 MGP_NODShiLtJ_G0031228.1 mouse_genomes_project 6 152727090 152744036 - MGP_NODShiLtJ_P0080267 Gsg1 protein_coding protein_coding MGP_NODShiLtJ_T0008480.1 MGP_NODShiLtJ_G0006854.1 mouse_genomes_project 6 35118970 35119629 - BC049739 lincRNA lincRNA MGP_NODShiLtJ_T0078228.1 MGP_NODShiLtJ_G0030783.1 mouse_genomes_project 6 97867870 97869702 - MGP_NODShiLtJ_P0078228 Pcbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077585.1 MGP_NODShiLtJ_G0030657.1 mouse_genomes_project 6 79584434 79648047 + MGP_NODShiLtJ_P0077585 Eif2ak3 protein_coding protein_coding MGP_NODShiLtJ_T0077586.1 MGP_NODShiLtJ_G0030657.1 mouse_genomes_project 6 79584472 79605730 + MGP_NODShiLtJ_P0077586 Eif2ak3 protein_coding protein_coding MGP_NODShiLtJ_T0077587.1 MGP_NODShiLtJ_G0030657.1 mouse_genomes_project 6 79584475 79585562 + Eif2ak3 protein_coding retained_intron MGP_NODShiLtJ_T0077588.1 MGP_NODShiLtJ_G0030657.1 mouse_genomes_project 6 79619479 79635636 + Eif2ak3 protein_coding retained_intron MGP_NODShiLtJ_T0077589.1 MGP_NODShiLtJ_G0030657.1 mouse_genomes_project 6 79638994 79643979 + Eif2ak3 protein_coding retained_intron MGP_NODShiLtJ_T0015157.1 MGP_NODShiLtJ_G0013265.1 mouse_genomes_project 6 23405539 23406662 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015529.1 MGP_NODShiLtJ_G0013637.1 mouse_genomes_project 6 160565693 160566763 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078821.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 121996281 122341851 + MGP_NODShiLtJ_P0078821 Itpr1 protein_coding protein_coding MGP_NODShiLtJ_T0078822.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 121996284 122341859 + MGP_NODShiLtJ_P0078822 Itpr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078823.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 121996387 122341851 + MGP_NODShiLtJ_P0078823 Itpr1 protein_coding protein_coding MGP_NODShiLtJ_T0078824.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122037271 122175039 + Itpr1 protein_coding retained_intron MGP_NODShiLtJ_T0078825.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122138122 122159535 + MGP_NODShiLtJ_P0078825 Itpr1 protein_coding protein_coding MGP_NODShiLtJ_T0078826.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122197302 122201034 + Itpr1 protein_coding retained_intron MGP_NODShiLtJ_T0078827.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122198836 122227610 + MGP_NODShiLtJ_P0078827 Itpr1 protein_coding protein_coding MGP_NODShiLtJ_T0078828.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122198903 122262298 + MGP_NODShiLtJ_P0078828 Itpr1 protein_coding protein_coding MGP_NODShiLtJ_T0078829.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122199909 122227565 + MGP_NODShiLtJ_P0078829 Itpr1 protein_coding protein_coding MGP_NODShiLtJ_T0078830.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122246807 122259787 + Itpr1 protein_coding processed_transcript MGP_NODShiLtJ_T0078831.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122295378 122300008 + Itpr1 protein_coding retained_intron MGP_NODShiLtJ_T0078832.1 MGP_NODShiLtJ_G0030907.1 mouse_genomes_project 6 122305764 122306705 + Itpr1 protein_coding retained_intron MGP_NODShiLtJ_T0018122.1 MGP_NODShiLtJ_G0015501.1 mouse_genomes_project 6 66869545 66889079 - processed_transcript lincRNA MGP_NODShiLtJ_T0018123.1 MGP_NODShiLtJ_G0015501.1 mouse_genomes_project 6 66869561 66889088 - processed_transcript lincRNA MGP_NODShiLtJ_T0018124.1 MGP_NODShiLtJ_G0015501.1 mouse_genomes_project 6 66874161 66889115 - processed_transcript retained_intron MGP_NODShiLtJ_T0011535.1 MGP_NODShiLtJ_G0009668.1 mouse_genomes_project 6 57452278 57452374 + Gm28032 misc_RNA misc_RNA MGP_NODShiLtJ_T0008570.1 MGP_NODShiLtJ_G0006921.1 mouse_genomes_project 6 93865345 93869334 - 2310069B03Rik lincRNA lincRNA MGP_NODShiLtJ_T0008571.1 MGP_NODShiLtJ_G0006921.1 mouse_genomes_project 6 93866008 93869334 - 2310069B03Rik lincRNA lincRNA MGP_NODShiLtJ_T0008572.1 MGP_NODShiLtJ_G0006921.1 mouse_genomes_project 6 93866902 93869313 - 2310069B03Rik lincRNA lincRNA MGP_NODShiLtJ_T0015291.1 MGP_NODShiLtJ_G0013399.1 mouse_genomes_project 6 75324051 75324516 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078750.1 MGP_NODShiLtJ_G0030890.1 mouse_genomes_project 6 112010369 112012757 + MGP_NODShiLtJ_P0078750 Gpr27 protein_coding protein_coding MGP_NODShiLtJ_T0015170.1 MGP_NODShiLtJ_G0013278.1 mouse_genomes_project 6 32987589 32987820 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076105.1 MGP_NODShiLtJ_G0030287.1 mouse_genomes_project 6 21634861 22257975 + MGP_NODShiLtJ_P0076105 Kcnd2 protein_coding protein_coding MGP_NODShiLtJ_T0015279.1 MGP_NODShiLtJ_G0013387.1 mouse_genomes_project 6 73835880 73836445 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078843.1 MGP_NODShiLtJ_G0030911.1 mouse_genomes_project 6 124850784 125920902 + MGP_NODShiLtJ_P0078843 Grm7 protein_coding protein_coding MGP_NODShiLtJ_T0078844.1 MGP_NODShiLtJ_G0030911.1 mouse_genomes_project 6 124850784 125849457 + MGP_NODShiLtJ_P0078844 Grm7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078845.1 MGP_NODShiLtJ_G0030911.1 mouse_genomes_project 6 124850785 125922065 + MGP_NODShiLtJ_P0078845 Grm7 protein_coding protein_coding MGP_NODShiLtJ_T0078846.1 MGP_NODShiLtJ_G0030911.1 mouse_genomes_project 6 125848082 125854229 + MGP_NODShiLtJ_P0078846 Grm7 protein_coding protein_coding MGP_NODShiLtJ_T0078847.1 MGP_NODShiLtJ_G0030911.1 mouse_genomes_project 6 125848111 125856580 + MGP_NODShiLtJ_P0078847 Grm7 protein_coding protein_coding MGP_NODShiLtJ_T0001984.1 MGP_NODShiLtJ_G0001896.1 mouse_genomes_project 6 87824094 87828126 - TEC TEC MGP_NODShiLtJ_T0077598.1 MGP_NODShiLtJ_G0030662.1 mouse_genomes_project 6 79983610 80041356 - MGP_NODShiLtJ_P0077598 Smyd1 protein_coding protein_coding MGP_NODShiLtJ_T0077599.1 MGP_NODShiLtJ_G0030662.1 mouse_genomes_project 6 79983612 80041328 - MGP_NODShiLtJ_P0077599 Smyd1 protein_coding protein_coding MGP_NODShiLtJ_T0077600.1 MGP_NODShiLtJ_G0030662.1 mouse_genomes_project 6 79985015 80103891 - MGP_NODShiLtJ_P0077600 Smyd1 protein_coding protein_coding MGP_NODShiLtJ_T0077601.1 MGP_NODShiLtJ_G0030662.1 mouse_genomes_project 6 79985169 79986489 - MGP_NODShiLtJ_P0077601 Smyd1 protein_coding protein_coding MGP_NODShiLtJ_T0077602.1 MGP_NODShiLtJ_G0030662.1 mouse_genomes_project 6 80037530 80041307 - MGP_NODShiLtJ_P0077602 Smyd1 protein_coding protein_coding MGP_NODShiLtJ_T0077606.1 MGP_NODShiLtJ_G0030662.1 mouse_genomes_project 6 80092027 80103864 - MGP_NODShiLtJ_P0077606 Smyd1 protein_coding protein_coding MGP_NODShiLtJ_T0078458.1 MGP_NODShiLtJ_G0030824.1 mouse_genomes_project 6 100850337 100896775 - MGP_NODShiLtJ_P0078458 Plxna1 protein_coding protein_coding MGP_NODShiLtJ_T0078459.1 MGP_NODShiLtJ_G0030824.1 mouse_genomes_project 6 100854826 100855292 - Plxna1 protein_coding retained_intron MGP_NODShiLtJ_T0078460.1 MGP_NODShiLtJ_G0030824.1 mouse_genomes_project 6 100856717 100858836 - MGP_NODShiLtJ_P0078460 Plxna1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078461.1 MGP_NODShiLtJ_G0030824.1 mouse_genomes_project 6 100864580 100867274 - Plxna1 protein_coding processed_transcript MGP_NODShiLtJ_T0078462.1 MGP_NODShiLtJ_G0030824.1 mouse_genomes_project 6 100869614 100876793 - MGP_NODShiLtJ_P0078462 Plxna1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077050.1 MGP_NODShiLtJ_G0030510.1 mouse_genomes_project 6 53592684 53599512 + MGP_NODShiLtJ_P0077050 Gimap4 protein_coding protein_coding MGP_NODShiLtJ_T0077051.1 MGP_NODShiLtJ_G0030510.1 mouse_genomes_project 6 53592713 53600194 + MGP_NODShiLtJ_P0077051 Gimap4 protein_coding protein_coding MGP_NODShiLtJ_T0077052.1 MGP_NODShiLtJ_G0030510.1 mouse_genomes_project 6 53592713 53600194 + MGP_NODShiLtJ_P0077052 Gimap4 protein_coding protein_coding MGP_NODShiLtJ_T0077053.1 MGP_NODShiLtJ_G0030510.1 mouse_genomes_project 6 53592716 53600011 + MGP_NODShiLtJ_P0077053 Gimap4 protein_coding protein_coding MGP_NODShiLtJ_T0077054.1 MGP_NODShiLtJ_G0030510.1 mouse_genomes_project 6 53592716 53600191 + MGP_NODShiLtJ_P0077054 Gimap4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077055.1 MGP_NODShiLtJ_G0030510.1 mouse_genomes_project 6 53592717 53600194 + MGP_NODShiLtJ_P0077055 Gimap4 protein_coding protein_coding MGP_NODShiLtJ_T0008681.1 MGP_NODShiLtJ_G0007006.1 mouse_genomes_project 6 157440199 157448007 - 4922502N22Rik lincRNA lincRNA MGP_NODShiLtJ_T0002040.1 MGP_NODShiLtJ_G0001952.1 mouse_genomes_project 6 103356901 103358731 + TEC TEC MGP_NODShiLtJ_T0077783.1 MGP_NODShiLtJ_G0030696.1 mouse_genomes_project 6 82451750 82452845 - MGP_NODShiLtJ_P0077783 4931417E11Rik protein_coding protein_coding MGP_NODShiLtJ_T0077784.1 MGP_NODShiLtJ_G0030696.1 mouse_genomes_project 6 82451758 82452797 - 4931417E11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0077785.1 MGP_NODShiLtJ_G0030696.1 mouse_genomes_project 6 82451824 82452742 - 4931417E11Rik protein_coding transcribed_processed_pseudogene MGP_NODShiLtJ_T0080035.1 MGP_NODShiLtJ_G0031139.1 mouse_genomes_project 6 144866187 144868142 - Klrb1 protein_coding processed_transcript MGP_NODShiLtJ_T0080036.1 MGP_NODShiLtJ_G0031139.1 mouse_genomes_project 6 144866802 144901271 - MGP_NODShiLtJ_P0080036 Klrb1 protein_coding protein_coding MGP_NODShiLtJ_T0080762.1 MGP_NODShiLtJ_G0031319.1 mouse_genomes_project 6 167921764 168042381 - MGP_NODShiLtJ_P0080762 Dennd5b protein_coding protein_coding MGP_NODShiLtJ_T0080763.1 MGP_NODShiLtJ_G0031319.1 mouse_genomes_project 6 167949185 167952524 - Dennd5b protein_coding retained_intron MGP_NODShiLtJ_T0080764.1 MGP_NODShiLtJ_G0031319.1 mouse_genomes_project 6 167949323 168042239 - Dennd5b protein_coding retained_intron MGP_NODShiLtJ_T0080765.1 MGP_NODShiLtJ_G0031319.1 mouse_genomes_project 6 167973368 167978145 - Dennd5b protein_coding retained_intron MGP_NODShiLtJ_T0080766.1 MGP_NODShiLtJ_G0031319.1 mouse_genomes_project 6 168003428 168019332 - MGP_NODShiLtJ_P0080766 Dennd5b protein_coding protein_coding MGP_NODShiLtJ_T0080767.1 MGP_NODShiLtJ_G0031319.1 mouse_genomes_project 6 168020790 168024685 - Dennd5b protein_coding retained_intron MGP_NODShiLtJ_T0080705.1 MGP_NODShiLtJ_G0031312.1 mouse_genomes_project 6 166276126 166316513 + MGP_NODShiLtJ_P0080705 Ccdc91 protein_coding protein_coding MGP_NODShiLtJ_T0080706.1 MGP_NODShiLtJ_G0031312.1 mouse_genomes_project 6 166276169 166438733 + MGP_NODShiLtJ_P0080706 Ccdc91 protein_coding protein_coding MGP_NODShiLtJ_T0080707.1 MGP_NODShiLtJ_G0031312.1 mouse_genomes_project 6 166276289 166343151 + MGP_NODShiLtJ_P0080707 Ccdc91 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080708.1 MGP_NODShiLtJ_G0031312.1 mouse_genomes_project 6 166340453 166351906 + Ccdc91 protein_coding processed_transcript MGP_NODShiLtJ_T0077652.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80730490 80764665 - MGP_NODShiLtJ_P0077652 Ptcd3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0077653.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80733083 80764647 - MGP_NODShiLtJ_P0077653 Ptcd3 protein_coding protein_coding MGP_NODShiLtJ_T0077654.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80733084 80764647 - MGP_NODShiLtJ_P0077654 Ptcd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077655.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80733086 80742408 - Ptcd3 protein_coding retained_intron MGP_NODShiLtJ_T0077656.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80737808 80742333 - Ptcd3 protein_coding retained_intron MGP_NODShiLtJ_T0077657.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80739986 80764641 - Ptcd3 protein_coding retained_intron MGP_NODShiLtJ_T0077658.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80741342 80751297 - MGP_NODShiLtJ_P0077658 Ptcd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077659.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80747128 80749281 - Ptcd3 protein_coding retained_intron MGP_NODShiLtJ_T0077660.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80749437 80752587 - Ptcd3 protein_coding retained_intron MGP_NODShiLtJ_T0077661.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80752543 80764615 - MGP_NODShiLtJ_P0077661 Ptcd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077662.1 MGP_NODShiLtJ_G0030673.1 mouse_genomes_project 6 80758588 80759371 - Ptcd3 protein_coding retained_intron MGP_NODShiLtJ_T0077399.1 MGP_NODShiLtJ_G0030595.1 mouse_genomes_project 6 62773328 62774355 + MGP_NODShiLtJ_P0077399 Vmn1r11 protein_coding protein_coding MGP_NODShiLtJ_T0078102.1 MGP_NODShiLtJ_G0030761.1 mouse_genomes_project 6 96676879 96691308 + MGP_NODShiLtJ_P0078102 Smyd5 protein_coding protein_coding MGP_NODShiLtJ_T0078103.1 MGP_NODShiLtJ_G0030761.1 mouse_genomes_project 6 96676892 96685223 + Smyd5 protein_coding retained_intron MGP_NODShiLtJ_T0078104.1 MGP_NODShiLtJ_G0030761.1 mouse_genomes_project 6 96676963 96677709 + Smyd5 protein_coding retained_intron MGP_NODShiLtJ_T0078105.1 MGP_NODShiLtJ_G0030761.1 mouse_genomes_project 6 96684024 96686836 + Smyd5 protein_coding retained_intron MGP_NODShiLtJ_T0078106.1 MGP_NODShiLtJ_G0030761.1 mouse_genomes_project 6 96686510 96690316 + Smyd5 protein_coding retained_intron MGP_NODShiLtJ_T0078107.1 MGP_NODShiLtJ_G0030761.1 mouse_genomes_project 6 96686605 96689833 + Smyd5 protein_coding processed_transcript MGP_NODShiLtJ_T0078108.1 MGP_NODShiLtJ_G0030761.1 mouse_genomes_project 6 96686620 96690070 + Smyd5 protein_coding retained_intron MGP_NODShiLtJ_T0078109.1 MGP_NODShiLtJ_G0030761.1 mouse_genomes_project 6 96687453 96690305 + Smyd5 protein_coding processed_transcript MGP_NODShiLtJ_T0002145.1 MGP_NODShiLtJ_G0002057.1 mouse_genomes_project 6 168239457 168242373 - TEC TEC MGP_NODShiLtJ_T0078685.1 MGP_NODShiLtJ_G0030881.1 mouse_genomes_project 6 109308533 109332905 - MGP_NODShiLtJ_P0078685 Uba3 protein_coding protein_coding MGP_NODShiLtJ_T0078686.1 MGP_NODShiLtJ_G0030881.1 mouse_genomes_project 6 109308681 109332904 - MGP_NODShiLtJ_P0078686 Uba3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078687.1 MGP_NODShiLtJ_G0030881.1 mouse_genomes_project 6 109308870 109332992 - MGP_NODShiLtJ_P0078687 Uba3 protein_coding protein_coding MGP_NODShiLtJ_T0078688.1 MGP_NODShiLtJ_G0030881.1 mouse_genomes_project 6 109322744 109324914 - Uba3 protein_coding retained_intron MGP_NODShiLtJ_T0078689.1 MGP_NODShiLtJ_G0030881.1 mouse_genomes_project 6 109330358 109332910 - Uba3 protein_coding retained_intron MGP_NODShiLtJ_T0078690.1 MGP_NODShiLtJ_G0030881.1 mouse_genomes_project 6 109331435 109332913 - Uba3 protein_coding retained_intron MGP_NODShiLtJ_T0002647.1 MGP_NODShiLtJ_G0002526.1 mouse_genomes_project 6 44661950 44662565 + MGP_NODShiLtJ_P0002647 Trbv30 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002648.1 MGP_NODShiLtJ_G0002526.1 mouse_genomes_project 6 44661950 44662565 + MGP_NODShiLtJ_P0002648 Trbv30 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0080084.1 MGP_NODShiLtJ_G0031156.1 mouse_genomes_project 6 145883709 145906888 - MGP_NODShiLtJ_P0080084 Olr1 protein_coding protein_coding MGP_NODShiLtJ_T0080085.1 MGP_NODShiLtJ_G0031156.1 mouse_genomes_project 6 145886433 145906830 - MGP_NODShiLtJ_P0080085 Olr1 protein_coding protein_coding MGP_NODShiLtJ_T0080086.1 MGP_NODShiLtJ_G0031156.1 mouse_genomes_project 6 145886433 145906830 - MGP_NODShiLtJ_P0080086 Olr1 protein_coding protein_coding MGP_NODShiLtJ_T0080087.1 MGP_NODShiLtJ_G0031156.1 mouse_genomes_project 6 145886472 145895635 - MGP_NODShiLtJ_P0080087 Olr1 protein_coding protein_coding MGP_NODShiLtJ_T0080088.1 MGP_NODShiLtJ_G0031156.1 mouse_genomes_project 6 145899637 145906888 - MGP_NODShiLtJ_P0080088 Olr1 protein_coding protein_coding MGP_NODShiLtJ_T0076079.1 MGP_NODShiLtJ_G0030282.1 mouse_genomes_project 6 17478847 17536804 - MGP_NODShiLtJ_P0076079 Asz1 protein_coding protein_coding MGP_NODShiLtJ_T0076080.1 MGP_NODShiLtJ_G0030282.1 mouse_genomes_project 6 17478866 17536791 - Asz1 protein_coding retained_intron MGP_NODShiLtJ_T0076081.1 MGP_NODShiLtJ_G0030282.1 mouse_genomes_project 6 17494982 17496285 - Asz1 protein_coding retained_intron MGP_NODShiLtJ_T0076082.1 MGP_NODShiLtJ_G0030282.1 mouse_genomes_project 6 17498616 17536792 - MGP_NODShiLtJ_P0076082 Asz1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076083.1 MGP_NODShiLtJ_G0030282.1 mouse_genomes_project 6 17499903 17536808 - Asz1 protein_coding processed_transcript MGP_NODShiLtJ_T0077972.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94383293 94396962 + MGP_NODShiLtJ_P0077972 Bola3 protein_coding protein_coding MGP_NODShiLtJ_T0077973.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94383362 94396937 + MGP_NODShiLtJ_P0077973 Bola3 protein_coding protein_coding MGP_NODShiLtJ_T0077974.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94383592 94398702 + MGP_NODShiLtJ_P0077974 Bola3 protein_coding protein_coding MGP_NODShiLtJ_T0077975.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94383637 94384547 + Bola3 protein_coding processed_transcript MGP_NODShiLtJ_T0077976.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94383666 94387345 + Bola3 protein_coding retained_intron MGP_NODShiLtJ_T0077977.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94385186 94387356 + Bola3 protein_coding retained_intron MGP_NODShiLtJ_T0077978.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94385186 94396982 + Bola3 protein_coding retained_intron MGP_NODShiLtJ_T0077979.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94386241 94396899 + Bola3 protein_coding processed_transcript MGP_NODShiLtJ_T0077980.1 MGP_NODShiLtJ_G0030738.1 mouse_genomes_project 6 94387460 94397813 + Bola3 protein_coding processed_transcript MGP_NODShiLtJ_T0015372.1 MGP_NODShiLtJ_G0013480.1 mouse_genomes_project 6 106753449 106754439 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078124.1 MGP_NODShiLtJ_G0030764.1 mouse_genomes_project 6 96714443 96756621 - MGP_NODShiLtJ_P0078124 Fbxo41 protein_coding protein_coding MGP_NODShiLtJ_T0078125.1 MGP_NODShiLtJ_G0030764.1 mouse_genomes_project 6 96714447 96756513 - MGP_NODShiLtJ_P0078125 Fbxo41 protein_coding protein_coding MGP_NODShiLtJ_T0078126.1 MGP_NODShiLtJ_G0030764.1 mouse_genomes_project 6 96714449 96756485 - MGP_NODShiLtJ_P0078126 Fbxo41 protein_coding protein_coding MGP_NODShiLtJ_T0008707.1 MGP_NODShiLtJ_G0007024.1 mouse_genomes_project 6 166518135 166521162 - lincRNA lincRNA MGP_NODShiLtJ_T0077162.1 MGP_NODShiLtJ_G0030535.1 mouse_genomes_project 6 55660416 55683744 - MGP_NODShiLtJ_P0077162 4921507P07Rik protein_coding protein_coding MGP_NODShiLtJ_T0002511.1 MGP_NODShiLtJ_G0002414.1 mouse_genomes_project 6 44993518 44993566 + MGP_NODShiLtJ_P0002511 Trbj1-2 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0008575.1 MGP_NODShiLtJ_G0006924.1 mouse_genomes_project 6 95689274 95689720 + 4930504D19Rik lincRNA lincRNA MGP_NODShiLtJ_T0101349.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52768754 52780884 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101350.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52768778 52774484 + transcribed_unprocessed_pseudogene retained_intron MGP_NODShiLtJ_T0101351.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52768786 52774500 + transcribed_unprocessed_pseudogene retained_intron MGP_NODShiLtJ_T0101352.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52768791 52779488 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101353.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52768791 52773066 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101354.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52768833 52779909 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101355.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52771771 52775324 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101356.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52771839 52777673 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101357.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52772230 52782254 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101358.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52772243 52779910 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101359.1 MGP_NODShiLtJ_G0039584.1 mouse_genomes_project 6 52773012 52779909 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0015222.1 MGP_NODShiLtJ_G0013330.1 mouse_genomes_project 6 54236202 54236768 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010675.1 MGP_NODShiLtJ_G0008808.1 mouse_genomes_project 6 96561773 96561855 - Mir705 miRNA miRNA MGP_NODShiLtJ_T0080483.1 MGP_NODShiLtJ_G0031273.1 mouse_genomes_project 6 160809886 160830013 + MGP_NODShiLtJ_P0080483 Pyroxd1 protein_coding protein_coding MGP_NODShiLtJ_T0080484.1 MGP_NODShiLtJ_G0031273.1 mouse_genomes_project 6 160809899 160812086 + Pyroxd1 protein_coding retained_intron MGP_NODShiLtJ_T0080485.1 MGP_NODShiLtJ_G0031273.1 mouse_genomes_project 6 160809910 160828807 + Pyroxd1 protein_coding retained_intron MGP_NODShiLtJ_T0080486.1 MGP_NODShiLtJ_G0031273.1 mouse_genomes_project 6 160809965 160828758 + MGP_NODShiLtJ_P0080486 Pyroxd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080487.1 MGP_NODShiLtJ_G0031273.1 mouse_genomes_project 6 160811147 160824280 + Pyroxd1 protein_coding processed_transcript MGP_NODShiLtJ_T0080489.1 MGP_NODShiLtJ_G0031273.1 mouse_genomes_project 6 160818160 160821473 + Pyroxd1 protein_coding retained_intron MGP_NODShiLtJ_T0002693.1 MGP_NODShiLtJ_G0002566.1 mouse_genomes_project 6 44630688 44630965 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0102042.1 MGP_NODShiLtJ_G0040209.1 mouse_genomes_project 6 149865460 149866414 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015106.1 MGP_NODShiLtJ_G0013214.1 mouse_genomes_project 6 6500 7907 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079906.1 MGP_NODShiLtJ_G0031111.1 mouse_genomes_project 6 142674911 142709462 - MGP_NODShiLtJ_P0079906 Kcna6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079907.1 MGP_NODShiLtJ_G0031111.1 mouse_genomes_project 6 142674913 142705611 - Kcna6 protein_coding processed_transcript MGP_NODShiLtJ_T0079908.1 MGP_NODShiLtJ_G0031111.1 mouse_genomes_project 6 142674914 142709474 - MGP_NODShiLtJ_P0079908 Kcna6 protein_coding protein_coding MGP_NODShiLtJ_T0079909.1 MGP_NODShiLtJ_G0031111.1 mouse_genomes_project 6 142705487 142708951 - MGP_NODShiLtJ_P0079909 Kcna6 protein_coding protein_coding MGP_NODShiLtJ_T0001933.1 MGP_NODShiLtJ_G0001845.1 mouse_genomes_project 6 50631528 50635433 + TEC TEC MGP_NODShiLtJ_T0015467.1 MGP_NODShiLtJ_G0013575.1 mouse_genomes_project 6 142271583 142271996 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076973.1 MGP_NODShiLtJ_G0030493.1 mouse_genomes_project 6 52779724 52791698 + MGP_NODShiLtJ_P0076973 Zfp956 protein_coding protein_coding MGP_NODShiLtJ_T0076974.1 MGP_NODShiLtJ_G0030493.1 mouse_genomes_project 6 52779779 52782596 + Zfp956 protein_coding retained_intron MGP_NODShiLtJ_T0076975.1 MGP_NODShiLtJ_G0030493.1 mouse_genomes_project 6 52779781 52791695 + MGP_NODShiLtJ_P0076975 Zfp956 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015129.1 MGP_NODShiLtJ_G0013237.1 mouse_genomes_project 6 8553949 8554850 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001868.1 MGP_NODShiLtJ_G0001780.1 mouse_genomes_project 6 1537871 1540693 - TEC TEC MGP_NODShiLtJ_T0015120.1 MGP_NODShiLtJ_G0013228.1 mouse_genomes_project 6 4774359 4774720 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076797.1 MGP_NODShiLtJ_G0030432.1 mouse_genomes_project 6 44687484 44689839 + MGP_NODShiLtJ_P0076797 protein_coding protein_coding MGP_NODShiLtJ_T0011559.1 MGP_NODShiLtJ_G0009692.1 mouse_genomes_project 6 137667785 137668034 - Gm27826 misc_RNA misc_RNA MGP_NODShiLtJ_T0077393.1 MGP_NODShiLtJ_G0030589.1 mouse_genomes_project 6 62547864 62548920 + MGP_NODShiLtJ_P0077393 Vmn1r5 protein_coding protein_coding MGP_NODShiLtJ_T0015495.1 MGP_NODShiLtJ_G0013603.1 mouse_genomes_project 6 148170573 148172421 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015152.1 MGP_NODShiLtJ_G0013260.1 mouse_genomes_project 6 19698755 19698862 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015379.1 MGP_NODShiLtJ_G0013487.1 mouse_genomes_project 6 109932728 109933103 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011542.1 MGP_NODShiLtJ_G0009675.1 mouse_genomes_project 6 57472259 57472637 + Gm27985 misc_RNA misc_RNA MGP_NODShiLtJ_T0015491.1 MGP_NODShiLtJ_G0013599.1 mouse_genomes_project 6 147724004 147724110 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076446.1 MGP_NODShiLtJ_G0030353.1 mouse_genomes_project 6 33016718 33183731 - MGP_NODShiLtJ_P0076446 Copg2 protein_coding protein_coding MGP_NODShiLtJ_T0076447.1 MGP_NODShiLtJ_G0030353.1 mouse_genomes_project 6 33017576 33183786 - MGP_NODShiLtJ_P0076447 Copg2 protein_coding protein_coding MGP_NODShiLtJ_T0076448.1 MGP_NODShiLtJ_G0030353.1 mouse_genomes_project 6 33097533 33183702 - Copg2 protein_coding processed_transcript MGP_NODShiLtJ_T0076449.1 MGP_NODShiLtJ_G0030353.1 mouse_genomes_project 6 33098023 33183756 - Copg2 protein_coding processed_transcript MGP_NODShiLtJ_T0076450.1 MGP_NODShiLtJ_G0030353.1 mouse_genomes_project 6 33133774 33183722 - Copg2 protein_coding processed_transcript MGP_NODShiLtJ_T0076451.1 MGP_NODShiLtJ_G0030353.1 mouse_genomes_project 6 33134150 33183418 - Copg2 protein_coding processed_transcript MGP_NODShiLtJ_T0076452.1 MGP_NODShiLtJ_G0030353.1 mouse_genomes_project 6 33181891 33183429 - Copg2 protein_coding processed_transcript MGP_NODShiLtJ_T0076453.1 MGP_NODShiLtJ_G0030353.1 mouse_genomes_project 6 33183109 33183740 - Copg2 protein_coding processed_transcript MGP_NODShiLtJ_T0076224.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30533755 30969126 + MGP_NODShiLtJ_P0076224 Snd1 protein_coding protein_coding MGP_NODShiLtJ_T0076225.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30533755 30957968 + MGP_NODShiLtJ_P0076225 Snd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076226.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30533766 31019768 + MGP_NODShiLtJ_P0076226 Snd1 protein_coding protein_coding MGP_NODShiLtJ_T0076227.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30533836 30536305 + Snd1 protein_coding retained_intron MGP_NODShiLtJ_T0076228.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30533972 30873481 + MGP_NODShiLtJ_P0076228 Snd1 protein_coding protein_coding MGP_NODShiLtJ_T0076229.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30627388 30796668 + Snd1 protein_coding processed_transcript MGP_NODShiLtJ_T0076231.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30775412 30777591 + Snd1 protein_coding processed_transcript MGP_NODShiLtJ_T0076232.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30776223 30796678 + Snd1 protein_coding processed_transcript MGP_NODShiLtJ_T0076233.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30839806 30955232 + Snd1 protein_coding processed_transcript MGP_NODShiLtJ_T0076234.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30852592 30960482 + Snd1 protein_coding processed_transcript MGP_NODShiLtJ_T0076236.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30927983 30960557 + Snd1 protein_coding processed_transcript MGP_NODShiLtJ_T0076237.1 MGP_NODShiLtJ_G0030319.1 mouse_genomes_project 6 30960291 30966821 + Snd1 protein_coding retained_intron MGP_NODShiLtJ_T0015442.1 MGP_NODShiLtJ_G0013550.1 mouse_genomes_project 6 135652231 135652568 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080201.1 MGP_NODShiLtJ_G0031215.1 mouse_genomes_project 6 151847232 151982594 - MGP_NODShiLtJ_P0080201 Lrp6 protein_coding protein_coding MGP_NODShiLtJ_T0080202.1 MGP_NODShiLtJ_G0031215.1 mouse_genomes_project 6 151852648 151875954 - Lrp6 protein_coding retained_intron MGP_NODShiLtJ_T0080203.1 MGP_NODShiLtJ_G0031215.1 mouse_genomes_project 6 151852951 151980946 - MGP_NODShiLtJ_P0080203 Lrp6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080204.1 MGP_NODShiLtJ_G0031215.1 mouse_genomes_project 6 151865329 151869651 - Lrp6 protein_coding retained_intron MGP_NODShiLtJ_T0080205.1 MGP_NODShiLtJ_G0031215.1 mouse_genomes_project 6 151867242 151872417 - Lrp6 protein_coding retained_intron MGP_NODShiLtJ_T0080206.1 MGP_NODShiLtJ_G0031215.1 mouse_genomes_project 6 151918876 151982646 - MGP_NODShiLtJ_P0080206 Lrp6 protein_coding protein_coding MGP_NODShiLtJ_T0015143.1 MGP_NODShiLtJ_G0013251.1 mouse_genomes_project 6 16260543 16262239 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008449.1 MGP_NODShiLtJ_G0006833.1 mouse_genomes_project 6 22555971 22647013 - Gm26719 lincRNA lincRNA MGP_NODShiLtJ_T0008430.1 MGP_NODShiLtJ_G0006820.1 mouse_genomes_project 6 4522278 4527124 + Gm19272 lincRNA lincRNA MGP_NODShiLtJ_T0008431.1 MGP_NODShiLtJ_G0006820.1 mouse_genomes_project 6 4522278 4530091 + Gm19272 lincRNA lincRNA MGP_NODShiLtJ_T0078308.1 MGP_NODShiLtJ_G0030803.1 mouse_genomes_project 6 99225706 99248447 - MGP_NODShiLtJ_P0078308 Rab43 protein_coding protein_coding MGP_NODShiLtJ_T0078309.1 MGP_NODShiLtJ_G0030803.1 mouse_genomes_project 6 99225706 99246422 - MGP_NODShiLtJ_P0078309 Rab43 protein_coding protein_coding MGP_NODShiLtJ_T0078311.1 MGP_NODShiLtJ_G0030803.1 mouse_genomes_project 6 99225718 99226929 - Rab43 protein_coding processed_transcript MGP_NODShiLtJ_T0078312.1 MGP_NODShiLtJ_G0030803.1 mouse_genomes_project 6 99228352 99246425 - Rab43 protein_coding processed_transcript MGP_NODShiLtJ_T0078313.1 MGP_NODShiLtJ_G0030803.1 mouse_genomes_project 6 99228914 99248832 - Rab43 protein_coding processed_transcript MGP_NODShiLtJ_T0078315.1 MGP_NODShiLtJ_G0030803.1 mouse_genomes_project 6 99229560 99248766 - Rab43 protein_coding processed_transcript MGP_NODShiLtJ_T0078316.1 MGP_NODShiLtJ_G0030803.1 mouse_genomes_project 6 99230731 99248447 - MGP_NODShiLtJ_P0078316 Rab43 protein_coding protein_coding MGP_NODShiLtJ_T0004854.1 MGP_NODShiLtJ_G0004164.1 mouse_genomes_project 6 17258936 17259530 - Gm26738 antisense antisense MGP_NODShiLtJ_T0078031.1 MGP_NODShiLtJ_G0030750.1 mouse_genomes_project 6 94869162 94897620 - MGP_NODShiLtJ_P0078031 Paip2b protein_coding protein_coding MGP_NODShiLtJ_T0078032.1 MGP_NODShiLtJ_G0030750.1 mouse_genomes_project 6 94873033 94874573 - Paip2b protein_coding retained_intron MGP_NODShiLtJ_T0078033.1 MGP_NODShiLtJ_G0030750.1 mouse_genomes_project 6 94874086 94897592 - Paip2b protein_coding retained_intron MGP_NODShiLtJ_T0078034.1 MGP_NODShiLtJ_G0030750.1 mouse_genomes_project 6 94877228 94897592 - Paip2b protein_coding retained_intron MGP_NODShiLtJ_T0078035.1 MGP_NODShiLtJ_G0030750.1 mouse_genomes_project 6 94897335 94897579 - Paip2b protein_coding retained_intron MGP_NODShiLtJ_T0080187.1 MGP_NODShiLtJ_G0031211.1 mouse_genomes_project 6 150614594 150616949 + MGP_NODShiLtJ_P0080187 5530400C23Rik protein_coding protein_coding MGP_NODShiLtJ_T0001996.1 MGP_NODShiLtJ_G0001908.1 mouse_genomes_project 6 93987848 93989312 + TEC TEC MGP_NODShiLtJ_T0002070.1 MGP_NODShiLtJ_G0001982.1 mouse_genomes_project 6 122259012 122261233 - TEC TEC MGP_NODShiLtJ_T0079097.1 MGP_NODShiLtJ_G0030953.1 mouse_genomes_project 6 129793758 129826568 + MGP_NODShiLtJ_P0079097 Gm17482 protein_coding protein_coding MGP_NODShiLtJ_T0008585.1 MGP_NODShiLtJ_G0006933.1 mouse_genomes_project 6 99205435 99206773 + Gm43904 lincRNA lincRNA MGP_NODShiLtJ_T0011514.1 MGP_NODShiLtJ_G0009647.1 mouse_genomes_project 6 17099575 17099707 + Gm27755 misc_RNA misc_RNA MGP_NODShiLtJ_T0080093.1 MGP_NODShiLtJ_G0031159.1 mouse_genomes_project 6 145979715 145987754 + MGP_NODShiLtJ_P0080093 Klre1 protein_coding protein_coding MGP_NODShiLtJ_T0080094.1 MGP_NODShiLtJ_G0031159.1 mouse_genomes_project 6 145980061 145987704 + MGP_NODShiLtJ_P0080094 Klre1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080095.1 MGP_NODShiLtJ_G0031159.1 mouse_genomes_project 6 145985266 145987751 + Klre1 protein_coding retained_intron MGP_NODShiLtJ_T0002635.1 MGP_NODShiLtJ_G0002517.1 mouse_genomes_project 6 44491402 44491873 + MGP_NODShiLtJ_P0002635 Trbv15 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0015387.1 MGP_NODShiLtJ_G0013495.1 mouse_genomes_project 6 113156728 113157311 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076902.1 MGP_NODShiLtJ_G0030472.1 mouse_genomes_project 6 46509971 46510904 + MGP_NODShiLtJ_P0076902 Olfr447 protein_coding protein_coding MGP_NODShiLtJ_T0005566.1 MGP_NODShiLtJ_G0004684.1 mouse_genomes_project 6 98220624 98221666 - 2610306M01Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0102050.1 MGP_NODShiLtJ_G0040217.1 mouse_genomes_project 6 150721490 150723126 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015287.1 MGP_NODShiLtJ_G0013395.1 mouse_genomes_project 6 74625848 74626608 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079871.1 MGP_NODShiLtJ_G0031103.1 mouse_genomes_project 6 141178057 141178738 + Tnfrsf1a protein_coding processed_transcript MGP_NODShiLtJ_T0079872.1 MGP_NODShiLtJ_G0031103.1 mouse_genomes_project 6 141178153 141187896 + MGP_NODShiLtJ_P0079872 Tnfrsf1a protein_coding protein_coding MGP_NODShiLtJ_T0079873.1 MGP_NODShiLtJ_G0031103.1 mouse_genomes_project 6 141178425 141193062 + MGP_NODShiLtJ_P0079873 Tnfrsf1a protein_coding protein_coding MGP_NODShiLtJ_T0079874.1 MGP_NODShiLtJ_G0031103.1 mouse_genomes_project 6 141187950 141191682 + MGP_NODShiLtJ_P0079874 Tnfrsf1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079875.1 MGP_NODShiLtJ_G0031103.1 mouse_genomes_project 6 141188350 141192355 + MGP_NODShiLtJ_P0079875 Tnfrsf1a protein_coding protein_coding MGP_NODShiLtJ_T0079876.1 MGP_NODShiLtJ_G0031103.1 mouse_genomes_project 6 141191017 141192451 + Tnfrsf1a protein_coding retained_intron MGP_NODShiLtJ_T0008659.1 MGP_NODShiLtJ_G0006994.1 mouse_genomes_project 6 145105653 145106267 - Gm44066 lincRNA lincRNA MGP_NODShiLtJ_T0015351.1 MGP_NODShiLtJ_G0013459.1 mouse_genomes_project 6 97178834 97179470 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078869.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127501118 127523873 + MGP_NODShiLtJ_P0078869 Thumpd3 protein_coding protein_coding MGP_NODShiLtJ_T0078870.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127501195 127511615 + MGP_NODShiLtJ_P0078870 Thumpd3 protein_coding protein_coding MGP_NODShiLtJ_T0078871.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127501208 127516413 + Thumpd3 protein_coding retained_intron MGP_NODShiLtJ_T0078872.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127501220 127504437 + Thumpd3 protein_coding retained_intron MGP_NODShiLtJ_T0078873.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127501250 127502912 + Thumpd3 protein_coding retained_intron MGP_NODShiLtJ_T0078874.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127501351 127502572 + MGP_NODShiLtJ_P0078874 Thumpd3 protein_coding protein_coding MGP_NODShiLtJ_T0078875.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127501648 127502598 + MGP_NODShiLtJ_P0078875 Thumpd3 protein_coding protein_coding MGP_NODShiLtJ_T0078876.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127502308 127505927 + Thumpd3 protein_coding processed_transcript MGP_NODShiLtJ_T0078877.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127513582 127516637 + Thumpd3 protein_coding retained_intron MGP_NODShiLtJ_T0078878.1 MGP_NODShiLtJ_G0030918.1 mouse_genomes_project 6 127521024 127523496 + Thumpd3 protein_coding retained_intron MGP_NODShiLtJ_T0079226.1 MGP_NODShiLtJ_G0030977.1 mouse_genomes_project 6 131261895 131264996 + MGP_NODShiLtJ_P0079226 Olfr214 protein_coding protein_coding MGP_NODShiLtJ_T0079227.1 MGP_NODShiLtJ_G0030977.1 mouse_genomes_project 6 131263988 131264996 + MGP_NODShiLtJ_P0079227 Olfr214 protein_coding protein_coding MGP_NODShiLtJ_T0076963.1 MGP_NODShiLtJ_G0030489.1 mouse_genomes_project 6 52642323 52653856 - MGP_NODShiLtJ_P0076963 Zfp786 protein_coding protein_coding MGP_NODShiLtJ_T0076964.1 MGP_NODShiLtJ_G0030489.1 mouse_genomes_project 6 52644715 52653557 - Zfp786 protein_coding processed_transcript MGP_NODShiLtJ_T0076965.1 MGP_NODShiLtJ_G0030489.1 mouse_genomes_project 6 52651171 52653493 - Zfp786 protein_coding retained_intron MGP_NODShiLtJ_T0002134.1 MGP_NODShiLtJ_G0002046.1 mouse_genomes_project 6 164688952 164691818 + TEC TEC MGP_NODShiLtJ_T0000170.1 MGP_NODShiLtJ_G0000124.1 mouse_genomes_project 6 76830592 76831078 + MGP_NODShiLtJ_P0000170 Igkv15-103 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0015133.1 MGP_NODShiLtJ_G0013241.1 mouse_genomes_project 6 11250142 11251128 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080018.1 MGP_NODShiLtJ_G0031135.1 mouse_genomes_project 6 144600075 144645326 - MGP_NODShiLtJ_P0080018 Pzp protein_coding protein_coding MGP_NODShiLtJ_T0080019.1 MGP_NODShiLtJ_G0031135.1 mouse_genomes_project 6 144601783 144604075 - Pzp protein_coding processed_transcript MGP_NODShiLtJ_T0080020.1 MGP_NODShiLtJ_G0031135.1 mouse_genomes_project 6 144609566 144611441 - Pzp protein_coding retained_intron MGP_NODShiLtJ_T0080021.1 MGP_NODShiLtJ_G0031135.1 mouse_genomes_project 6 144639156 144645309 - MGP_NODShiLtJ_P0080021 Pzp protein_coding protein_coding MGP_NODShiLtJ_T0079250.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654197 132657540 + Zfp637 protein_coding retained_intron MGP_NODShiLtJ_T0079251.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654197 132658234 + MGP_NODShiLtJ_P0079251 Zfp637 protein_coding protein_coding MGP_NODShiLtJ_T0079252.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654198 132658541 + MGP_NODShiLtJ_P0079252 Zfp637 protein_coding protein_coding MGP_NODShiLtJ_T0079253.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654259 132658977 + MGP_NODShiLtJ_P0079253 Zfp637 protein_coding protein_coding MGP_NODShiLtJ_T0079254.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654263 132658978 + MGP_NODShiLtJ_P0079254 Zfp637 protein_coding protein_coding MGP_NODShiLtJ_T0079255.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654285 132658435 + MGP_NODShiLtJ_P0079255 Zfp637 protein_coding protein_coding MGP_NODShiLtJ_T0079256.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654285 132658435 + MGP_NODShiLtJ_P0079256 Zfp637 protein_coding protein_coding MGP_NODShiLtJ_T0079257.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654298 132658435 + MGP_NODShiLtJ_P0079257 Zfp637 protein_coding protein_coding MGP_NODShiLtJ_T0079258.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132654298 132658978 + MGP_NODShiLtJ_P0079258 Zfp637 protein_coding protein_coding MGP_NODShiLtJ_T0079259.1 MGP_NODShiLtJ_G0030984.1 mouse_genomes_project 6 132656274 132658597 + Zfp637 protein_coding retained_intron MGP_NODShiLtJ_T0015164.1 MGP_NODShiLtJ_G0013272.1 mouse_genomes_project 6 27252016 27252351 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015371.1 MGP_NODShiLtJ_G0013479.1 mouse_genomes_project 6 106383639 106383858 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080282.1 MGP_NODShiLtJ_G0031232.1 mouse_genomes_project 6 153951631 153971840 - MGP_NODShiLtJ_P0080282 E330021D16Rik protein_coding protein_coding MGP_NODShiLtJ_T0080283.1 MGP_NODShiLtJ_G0031232.1 mouse_genomes_project 6 153952047 153953163 - MGP_NODShiLtJ_P0080283 E330021D16Rik protein_coding protein_coding MGP_NODShiLtJ_T0080284.1 MGP_NODShiLtJ_G0031232.1 mouse_genomes_project 6 153952827 153971835 - MGP_NODShiLtJ_P0080284 E330021D16Rik protein_coding protein_coding MGP_NODShiLtJ_T0078351.1 MGP_NODShiLtJ_G0030809.1 mouse_genomes_project 6 99426529 99427746 - MGP_NODShiLtJ_P0078351 H1fx protein_coding protein_coding MGP_NODShiLtJ_T0008587.1 MGP_NODShiLtJ_G0006935.1 mouse_genomes_project 6 100651381 100663946 + lincRNA lincRNA MGP_NODShiLtJ_T0008588.1 MGP_NODShiLtJ_G0006935.1 mouse_genomes_project 6 100651392 100663964 + lincRNA lincRNA MGP_NODShiLtJ_T0008589.1 MGP_NODShiLtJ_G0006935.1 mouse_genomes_project 6 100651392 100657067 + lincRNA lincRNA MGP_NODShiLtJ_T0008590.1 MGP_NODShiLtJ_G0006935.1 mouse_genomes_project 6 100651392 100663929 + lincRNA lincRNA MGP_NODShiLtJ_T0015404.1 MGP_NODShiLtJ_G0013512.1 mouse_genomes_project 6 121631061 121631533 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102033.1 MGP_NODShiLtJ_G0040200.1 mouse_genomes_project 6 146252378 146264515 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0079580.1 MGP_NODShiLtJ_G0031045.1 mouse_genomes_project 6 138577228 138597469 + MGP_NODShiLtJ_P0079580 Clec4a2 protein_coding protein_coding MGP_NODShiLtJ_T0079581.1 MGP_NODShiLtJ_G0031045.1 mouse_genomes_project 6 138596487 138601775 + MGP_NODShiLtJ_P0079581 Clec4a2 protein_coding protein_coding MGP_NODShiLtJ_T0079582.1 MGP_NODShiLtJ_G0031045.1 mouse_genomes_project 6 138596489 138617626 + MGP_NODShiLtJ_P0079582 Clec4a2 protein_coding protein_coding MGP_NODShiLtJ_T0079583.1 MGP_NODShiLtJ_G0031045.1 mouse_genomes_project 6 138597115 138618609 + MGP_NODShiLtJ_P0079583 Clec4a2 protein_coding protein_coding MGP_NODShiLtJ_T0079584.1 MGP_NODShiLtJ_G0031045.1 mouse_genomes_project 6 138597266 138617968 + MGP_NODShiLtJ_P0079584 Clec4a2 protein_coding protein_coding MGP_NODShiLtJ_T0005038.1 MGP_NODShiLtJ_G0004296.1 mouse_genomes_project 6 144485340 144504289 - Gm15862 antisense antisense MGP_NODShiLtJ_T0075948.1 MGP_NODShiLtJ_G0030261.1 mouse_genomes_project 6 6317856 6321857 + Nxph1 protein_coding processed_transcript MGP_NODShiLtJ_T0075949.1 MGP_NODShiLtJ_G0030261.1 mouse_genomes_project 6 6318039 6673933 + MGP_NODShiLtJ_P0075949 Nxph1 protein_coding protein_coding MGP_NODShiLtJ_T0075950.1 MGP_NODShiLtJ_G0030261.1 mouse_genomes_project 6 6319101 6673931 + MGP_NODShiLtJ_P0075950 Nxph1 protein_coding protein_coding MGP_NODShiLtJ_T0076826.1 MGP_NODShiLtJ_G0030444.1 mouse_genomes_project 6 45463314 45467783 + MGP_NODShiLtJ_P0076826 Sval1 protein_coding protein_coding MGP_NODShiLtJ_T0015249.1 MGP_NODShiLtJ_G0013357.1 mouse_genomes_project 6 64859824 64860070 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078478.1 MGP_NODShiLtJ_G0030834.1 mouse_genomes_project 6 101543701 101544824 + MGP_NODShiLtJ_P0078478 Vmn1r47 protein_coding protein_coding MGP_NODShiLtJ_T0001942.1 MGP_NODShiLtJ_G0001854.1 mouse_genomes_project 6 57509493 57510221 + TEC TEC MGP_NODShiLtJ_T0076147.1 MGP_NODShiLtJ_G0030295.1 mouse_genomes_project 6 24026842 24030216 - MGP_NODShiLtJ_P0076147 Fezf1 protein_coding protein_coding MGP_NODShiLtJ_T0101377.1 MGP_NODShiLtJ_G0039594.1 mouse_genomes_project 6 146870796 146915016 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0001975.1 MGP_NODShiLtJ_G0001887.1 mouse_genomes_project 6 85107510 85108875 - TEC TEC MGP_NODShiLtJ_T0001974.1 MGP_NODShiLtJ_G0001886.1 mouse_genomes_project 6 82198759 82200703 + TEC TEC MGP_NODShiLtJ_T0079938.1 MGP_NODShiLtJ_G0031119.1 mouse_genomes_project 6 143085283 143104421 - MGP_NODShiLtJ_P0079938 Tigar protein_coding protein_coding MGP_NODShiLtJ_T0079939.1 MGP_NODShiLtJ_G0031119.1 mouse_genomes_project 6 143087926 143104428 - MGP_NODShiLtJ_P0079939 Tigar protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079014.1 MGP_NODShiLtJ_G0030941.1 mouse_genomes_project 6 128134884 128193071 + MGP_NODShiLtJ_P0079014 Irak2 protein_coding protein_coding MGP_NODShiLtJ_T0079015.1 MGP_NODShiLtJ_G0030941.1 mouse_genomes_project 6 128134897 128164318 + Irak2 protein_coding retained_intron MGP_NODShiLtJ_T0079016.1 MGP_NODShiLtJ_G0030941.1 mouse_genomes_project 6 128134932 128172341 + MGP_NODShiLtJ_P0079016 Irak2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079017.1 MGP_NODShiLtJ_G0030941.1 mouse_genomes_project 6 128134944 128194291 + MGP_NODShiLtJ_P0079017 Irak2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079018.1 MGP_NODShiLtJ_G0030941.1 mouse_genomes_project 6 128168157 128172247 + Irak2 protein_coding processed_transcript MGP_NODShiLtJ_T0079019.1 MGP_NODShiLtJ_G0030941.1 mouse_genomes_project 6 128169085 128193071 + Irak2 protein_coding retained_intron MGP_NODShiLtJ_T0079020.1 MGP_NODShiLtJ_G0030941.1 mouse_genomes_project 6 128189893 128193186 + Irak2 protein_coding retained_intron MGP_NODShiLtJ_T0079021.1 MGP_NODShiLtJ_G0030941.1 mouse_genomes_project 6 128192028 128193280 + Irak2 protein_coding processed_transcript MGP_NODShiLtJ_T0008483.1 MGP_NODShiLtJ_G0006857.1 mouse_genomes_project 6 37061173 37069749 + Gm13860 lincRNA lincRNA MGP_NODShiLtJ_T0076665.1 MGP_NODShiLtJ_G0030395.1 mouse_genomes_project 6 41603260 41609207 + Fmc1 protein_coding processed_transcript MGP_NODShiLtJ_T0076666.1 MGP_NODShiLtJ_G0030395.1 mouse_genomes_project 6 41604581 41609208 + MGP_NODShiLtJ_P0076666 Fmc1 protein_coding protein_coding MGP_NODShiLtJ_T0005078.1 MGP_NODShiLtJ_G0004330.1 mouse_genomes_project 6 167865904 167869309 + 3010003L21Rik antisense antisense MGP_NODShiLtJ_T0005079.1 MGP_NODShiLtJ_G0004330.1 mouse_genomes_project 6 167865904 167869301 + 3010003L21Rik antisense antisense MGP_NODShiLtJ_T0101379.1 MGP_NODShiLtJ_G0039596.1 mouse_genomes_project 6 150614594 150616899 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101380.1 MGP_NODShiLtJ_G0039596.1 mouse_genomes_project 6 150614627 150616900 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0077308.1 MGP_NODShiLtJ_G0030570.1 mouse_genomes_project 6 60327576 60388575 - MGP_NODShiLtJ_P0077308 Nod1 protein_coding protein_coding MGP_NODShiLtJ_T0077309.1 MGP_NODShiLtJ_G0030570.1 mouse_genomes_project 6 60327576 60389526 - MGP_NODShiLtJ_P0077309 Nod1 protein_coding protein_coding MGP_NODShiLtJ_T0077310.1 MGP_NODShiLtJ_G0030570.1 mouse_genomes_project 6 60328386 60333037 - Nod1 protein_coding processed_transcript MGP_NODShiLtJ_T0077311.1 MGP_NODShiLtJ_G0030570.1 mouse_genomes_project 6 60333027 60349554 - MGP_NODShiLtJ_P0077311 Nod1 protein_coding protein_coding MGP_NODShiLtJ_T0077312.1 MGP_NODShiLtJ_G0030570.1 mouse_genomes_project 6 60343454 60345952 - Nod1 protein_coding processed_transcript MGP_NODShiLtJ_T0077313.1 MGP_NODShiLtJ_G0030570.1 mouse_genomes_project 6 60355574 60381789 - MGP_NODShiLtJ_P0077313 Nod1 protein_coding protein_coding MGP_NODShiLtJ_T0076181.1 MGP_NODShiLtJ_G0030307.1 mouse_genomes_project 6 25740355 25761199 + MGP_NODShiLtJ_P0076181 Hyal4 protein_coding protein_coding MGP_NODShiLtJ_T0010693.1 MGP_NODShiLtJ_G0008826.1 mouse_genomes_project 6 130385610 130385673 + Mir7660 miRNA miRNA MGP_NODShiLtJ_T0008427.1 MGP_NODShiLtJ_G0006818.1 mouse_genomes_project 6 3786579 3859423 - Gm20618 lincRNA lincRNA MGP_NODShiLtJ_T0008428.1 MGP_NODShiLtJ_G0006818.1 mouse_genomes_project 6 3813704 3866828 - Gm20618 lincRNA lincRNA MGP_NODShiLtJ_T0008434.1 MGP_NODShiLtJ_G0006823.1 mouse_genomes_project 6 8834367 8854431 - lincRNA lincRNA MGP_NODShiLtJ_T0008435.1 MGP_NODShiLtJ_G0006823.1 mouse_genomes_project 6 8834801 8854406 - lincRNA lincRNA MGP_NODShiLtJ_T0008436.1 MGP_NODShiLtJ_G0006823.1 mouse_genomes_project 6 8834860 8837181 - lincRNA lincRNA MGP_NODShiLtJ_T0015295.1 MGP_NODShiLtJ_G0013403.1 mouse_genomes_project 6 75572458 75572880 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079627.1 MGP_NODShiLtJ_G0031059.1 mouse_genomes_project 6 140203990 140221656 + MGP_NODShiLtJ_P0079627 C1rl protein_coding protein_coding MGP_NODShiLtJ_T0080703.1 MGP_NODShiLtJ_G0031311.1 mouse_genomes_project 6 166030762 166045322 - MGP_NODShiLtJ_P0080703 Pthlh protein_coding protein_coding MGP_NODShiLtJ_T0080704.1 MGP_NODShiLtJ_G0031311.1 mouse_genomes_project 6 166030770 166045338 - MGP_NODShiLtJ_P0080704 Pthlh protein_coding protein_coding MGP_NODShiLtJ_T0011566.1 MGP_NODShiLtJ_G0009699.1 mouse_genomes_project 6 163979039 163979369 - Gm22793 misc_RNA misc_RNA MGP_NODShiLtJ_T0001903.1 MGP_NODShiLtJ_G0001815.1 mouse_genomes_project 6 33439608 33441900 - TEC TEC MGP_NODShiLtJ_T0015199.1 MGP_NODShiLtJ_G0013307.1 mouse_genomes_project 6 47522344 47523090 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102014.1 MGP_NODShiLtJ_G0040182.1 mouse_genomes_project 6 92778516 92790629 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0077476.1 MGP_NODShiLtJ_G0030627.1 mouse_genomes_project 6 65475852 65562532 - MGP_NODShiLtJ_P0077476 Gprin3 protein_coding protein_coding MGP_NODShiLtJ_T0008554.1 MGP_NODShiLtJ_G0006908.1 mouse_genomes_project 6 80245504 80273564 + lincRNA lincRNA MGP_NODShiLtJ_T0001953.1 MGP_NODShiLtJ_G0001865.1 mouse_genomes_project 6 63555595 63558322 + TEC TEC MGP_NODShiLtJ_T0077395.1 MGP_NODShiLtJ_G0030591.1 mouse_genomes_project 6 62629867 62632482 - MGP_NODShiLtJ_P0077395 Vmn1r7 protein_coding protein_coding MGP_NODShiLtJ_T0080333.1 MGP_NODShiLtJ_G0031246.1 mouse_genomes_project 6 154761641 154888059 - MGP_NODShiLtJ_P0080333 Rerg protein_coding protein_coding MGP_NODShiLtJ_T0080334.1 MGP_NODShiLtJ_G0031246.1 mouse_genomes_project 6 154761647 154887281 - MGP_NODShiLtJ_P0080334 Rerg protein_coding protein_coding MGP_NODShiLtJ_T0080335.1 MGP_NODShiLtJ_G0031246.1 mouse_genomes_project 6 154762919 154887234 - MGP_NODShiLtJ_P0080335 Rerg protein_coding protein_coding MGP_NODShiLtJ_T0080336.1 MGP_NODShiLtJ_G0031246.1 mouse_genomes_project 6 154763209 154855835 - MGP_NODShiLtJ_P0080336 Rerg protein_coding protein_coding MGP_NODShiLtJ_T0080337.1 MGP_NODShiLtJ_G0031246.1 mouse_genomes_project 6 154834969 154887257 - MGP_NODShiLtJ_P0080337 Rerg protein_coding protein_coding MGP_NODShiLtJ_T0015191.1 MGP_NODShiLtJ_G0013299.1 mouse_genomes_project 6 44690509 44693395 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078388.1 MGP_NODShiLtJ_G0030817.1 mouse_genomes_project 6 100024110 100103160 - MGP_NODShiLtJ_P0078388 Kbtbd12 protein_coding protein_coding MGP_NODShiLtJ_T0078389.1 MGP_NODShiLtJ_G0030817.1 mouse_genomes_project 6 100024116 100093458 - MGP_NODShiLtJ_P0078389 Kbtbd12 protein_coding protein_coding MGP_NODShiLtJ_T0078390.1 MGP_NODShiLtJ_G0030817.1 mouse_genomes_project 6 100061716 100065840 - Kbtbd12 protein_coding retained_intron MGP_NODShiLtJ_T0078391.1 MGP_NODShiLtJ_G0030817.1 mouse_genomes_project 6 100088709 100103166 - Kbtbd12 protein_coding retained_intron MGP_NODShiLtJ_T0078392.1 MGP_NODShiLtJ_G0030817.1 mouse_genomes_project 6 100088988 100093479 - Kbtbd12 protein_coding processed_transcript MGP_NODShiLtJ_T0078393.1 MGP_NODShiLtJ_G0030817.1 mouse_genomes_project 6 100092392 100103163 - Kbtbd12 protein_coding retained_intron MGP_NODShiLtJ_T0078394.1 MGP_NODShiLtJ_G0030817.1 mouse_genomes_project 6 100093573 100113637 - MGP_NODShiLtJ_P0078394 Kbtbd12 protein_coding protein_coding MGP_NODShiLtJ_T0008647.1 MGP_NODShiLtJ_G0006982.1 mouse_genomes_project 6 137766343 137767652 + 1700063H04Rik lincRNA lincRNA MGP_NODShiLtJ_T0001980.1 MGP_NODShiLtJ_G0001892.1 mouse_genomes_project 6 87530352 87533355 - TEC TEC MGP_NODShiLtJ_T0001958.1 MGP_NODShiLtJ_G0001870.1 mouse_genomes_project 6 79870713 79871608 - TEC TEC MGP_NODShiLtJ_T0079022.1 MGP_NODShiLtJ_G0030942.1 mouse_genomes_project 6 128196318 128210332 + MGP_NODShiLtJ_P0079022 Tatdn2 protein_coding protein_coding MGP_NODShiLtJ_T0079023.1 MGP_NODShiLtJ_G0030942.1 mouse_genomes_project 6 128196832 128210212 + MGP_NODShiLtJ_P0079023 Tatdn2 protein_coding protein_coding MGP_NODShiLtJ_T0079024.1 MGP_NODShiLtJ_G0030942.1 mouse_genomes_project 6 128196941 128209468 + MGP_NODShiLtJ_P0079024 Tatdn2 protein_coding protein_coding MGP_NODShiLtJ_T0079025.1 MGP_NODShiLtJ_G0030942.1 mouse_genomes_project 6 128204085 128210329 + MGP_NODShiLtJ_P0079025 Tatdn2 protein_coding protein_coding MGP_NODShiLtJ_T0079026.1 MGP_NODShiLtJ_G0030942.1 mouse_genomes_project 6 128206538 128209712 + MGP_NODShiLtJ_P0079026 Tatdn2 protein_coding protein_coding MGP_NODShiLtJ_T0015447.1 MGP_NODShiLtJ_G0013555.1 mouse_genomes_project 6 136781198 136781948 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015154.1 MGP_NODShiLtJ_G0013262.1 mouse_genomes_project 6 21985104 21985324 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002037.1 MGP_NODShiLtJ_G0001949.1 mouse_genomes_project 6 103028889 103030091 + TEC TEC MGP_NODShiLtJ_T0015536.1 MGP_NODShiLtJ_G0013644.1 mouse_genomes_project 6 165538017 165538909 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077841.1 MGP_NODShiLtJ_G0030713.1 mouse_genomes_project 6 93586994 93674487 - Pole4 protein_coding processed_transcript MGP_NODShiLtJ_T0077842.1 MGP_NODShiLtJ_G0030713.1 mouse_genomes_project 6 93589869 93616049 - MGP_NODShiLtJ_P0077842 Pole4 protein_coding protein_coding MGP_NODShiLtJ_T0077843.1 MGP_NODShiLtJ_G0030713.1 mouse_genomes_project 6 93609883 93616108 - MGP_NODShiLtJ_P0077843 Pole4 protein_coding protein_coding MGP_NODShiLtJ_T0077844.1 MGP_NODShiLtJ_G0030713.1 mouse_genomes_project 6 93610491 93615699 - Pole4 protein_coding processed_transcript MGP_NODShiLtJ_T0077845.1 MGP_NODShiLtJ_G0030713.1 mouse_genomes_project 6 93611018 93615697 - Pole4 protein_coding processed_transcript MGP_NODShiLtJ_T0099458.1 MGP_NODShiLtJ_G0037852.1 mouse_genomes_project 6 138664289 138664371 - Gm22946 snRNA snRNA MGP_NODShiLtJ_T0080161.1 MGP_NODShiLtJ_G0031189.1 mouse_genomes_project 6 149411505 149418660 - MGP_NODShiLtJ_P0080161 protein_coding protein_coding MGP_NODShiLtJ_T0077405.1 MGP_NODShiLtJ_G0030601.1 mouse_genomes_project 6 63026855 63027835 - MGP_NODShiLtJ_P0077405 Vmn1r17 protein_coding protein_coding MGP_NODShiLtJ_T0002623.1 MGP_NODShiLtJ_G0002506.1 mouse_genomes_project 6 44213291 44213948 + MGP_NODShiLtJ_P0002623 Trbv1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0078972.1 MGP_NODShiLtJ_G0030932.1 mouse_genomes_project 6 127942841 127955109 + MGP_NODShiLtJ_P0078972 Il17re protein_coding protein_coding MGP_NODShiLtJ_T0078973.1 MGP_NODShiLtJ_G0030932.1 mouse_genomes_project 6 127943118 127945232 + Il17re protein_coding retained_intron MGP_NODShiLtJ_T0078974.1 MGP_NODShiLtJ_G0030932.1 mouse_genomes_project 6 127943164 127954748 + MGP_NODShiLtJ_P0078974 Il17re protein_coding protein_coding MGP_NODShiLtJ_T0078975.1 MGP_NODShiLtJ_G0030932.1 mouse_genomes_project 6 127943191 127954722 + MGP_NODShiLtJ_P0078975 Il17re protein_coding protein_coding MGP_NODShiLtJ_T0078976.1 MGP_NODShiLtJ_G0030932.1 mouse_genomes_project 6 127943252 127954491 + MGP_NODShiLtJ_P0078976 Il17re protein_coding protein_coding MGP_NODShiLtJ_T0078977.1 MGP_NODShiLtJ_G0030932.1 mouse_genomes_project 6 127943252 127954491 + MGP_NODShiLtJ_P0078977 Il17re protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078978.1 MGP_NODShiLtJ_G0030932.1 mouse_genomes_project 6 127949155 127955107 + Il17re protein_coding retained_intron MGP_NODShiLtJ_T0078979.1 MGP_NODShiLtJ_G0030932.1 mouse_genomes_project 6 127950707 127954335 + Il17re protein_coding retained_intron MGP_NODShiLtJ_T0098070.1 MGP_NODShiLtJ_G0036482.1 mouse_genomes_project 6 149599534 149599655 + n-R5s167 rRNA rRNA MGP_NODShiLtJ_T0015441.1 MGP_NODShiLtJ_G0013549.1 mouse_genomes_project 6 134999695 134999983 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008416.1 MGP_NODShiLtJ_G0006814.1 mouse_genomes_project 6 1784747 1785127 - Gm20714 lincRNA lincRNA MGP_NODShiLtJ_T0008417.1 MGP_NODShiLtJ_G0006814.1 mouse_genomes_project 6 1784747 1793740 - Gm20714 lincRNA lincRNA MGP_NODShiLtJ_T0008418.1 MGP_NODShiLtJ_G0006814.1 mouse_genomes_project 6 1784749 1790890 - Gm20714 lincRNA lincRNA MGP_NODShiLtJ_T0080788.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168272565 168289792 + MGP_NODShiLtJ_P0080788 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080789.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168272579 168298157 + MGP_NODShiLtJ_P0080789 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080790.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168272607 168292098 + MGP_NODShiLtJ_P0080790 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080791.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168272625 168298036 + MGP_NODShiLtJ_P0080791 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080792.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168272625 168298036 + MGP_NODShiLtJ_P0080792 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080793.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168272724 168273607 + 2810474O19Rik protein_coding retained_intron MGP_NODShiLtJ_T0080794.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168272879 168288610 + MGP_NODShiLtJ_P0080794 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080795.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168274567 168277518 + 2810474O19Rik protein_coding retained_intron MGP_NODShiLtJ_T0080796.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168280650 168289088 + MGP_NODShiLtJ_P0080796 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080797.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168287776 168288894 + MGP_NODShiLtJ_P0080797 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080798.1 MGP_NODShiLtJ_G0031322.1 mouse_genomes_project 6 168288578 168302160 + MGP_NODShiLtJ_P0080798 2810474O19Rik protein_coding protein_coding MGP_NODShiLtJ_T0002078.1 MGP_NODShiLtJ_G0001990.1 mouse_genomes_project 6 128189003 128189541 + TEC TEC MGP_NODShiLtJ_T0077544.1 MGP_NODShiLtJ_G0030647.1 mouse_genomes_project 6 74761208 74764110 - MGP_NODShiLtJ_P0077544 Vmn1r35 protein_coding protein_coding MGP_NODShiLtJ_T0015363.1 MGP_NODShiLtJ_G0013471.1 mouse_genomes_project 6 103942130 103942286 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004860.1 MGP_NODShiLtJ_G0004169.1 mouse_genomes_project 6 31455931 31456335 - Gm17172 antisense antisense MGP_NODShiLtJ_T0076598.1 MGP_NODShiLtJ_G0030378.1 mouse_genomes_project 6 37873526 37915106 - MGP_NODShiLtJ_P0076598 Slc13a4 protein_coding protein_coding MGP_NODShiLtJ_T0076599.1 MGP_NODShiLtJ_G0030378.1 mouse_genomes_project 6 37885893 37893748 - Slc13a4 protein_coding retained_intron MGP_NODShiLtJ_T0076600.1 MGP_NODShiLtJ_G0030378.1 mouse_genomes_project 6 37892076 37915104 - Slc13a4 protein_coding retained_intron MGP_NODShiLtJ_T0002010.1 MGP_NODShiLtJ_G0001922.1 mouse_genomes_project 6 98339477 98341273 + TEC TEC MGP_NODShiLtJ_T0015413.1 MGP_NODShiLtJ_G0013521.1 mouse_genomes_project 6 124974952 124975084 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077466.1 MGP_NODShiLtJ_G0030624.1 mouse_genomes_project 6 64980297 64982141 - MGP_NODShiLtJ_P0077466 Nap1l5 protein_coding protein_coding MGP_NODShiLtJ_T0077467.1 MGP_NODShiLtJ_G0030624.1 mouse_genomes_project 6 64980868 64981738 - MGP_NODShiLtJ_P0077467 Nap1l5 protein_coding protein_coding MGP_NODShiLtJ_T0080470.1 MGP_NODShiLtJ_G0031269.1 mouse_genomes_project 6 160415714 160456115 - MGP_NODShiLtJ_P0080470 Gm6614 protein_coding protein_coding MGP_NODShiLtJ_T0080471.1 MGP_NODShiLtJ_G0031269.1 mouse_genomes_project 6 160415714 160456115 - MGP_NODShiLtJ_P0080471 Gm6614 protein_coding protein_coding MGP_NODShiLtJ_T0080472.1 MGP_NODShiLtJ_G0031269.1 mouse_genomes_project 6 160416065 160451572 - MGP_NODShiLtJ_P0080472 Gm6614 protein_coding protein_coding MGP_NODShiLtJ_T0101179.1 MGP_NODShiLtJ_G0039496.1 mouse_genomes_project 6 101651454 101796519 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101180.1 MGP_NODShiLtJ_G0039496.1 mouse_genomes_project 6 101795461 101796490 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0015217.1 MGP_NODShiLtJ_G0013325.1 mouse_genomes_project 6 53905342 53906432 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002124.1 MGP_NODShiLtJ_G0002036.1 mouse_genomes_project 6 158524902 158525896 - TEC TEC MGP_NODShiLtJ_T0080255.1 MGP_NODShiLtJ_G0031226.1 mouse_genomes_project 6 152617807 152651572 - MGP_NODShiLtJ_P0080255 Hebp1 protein_coding protein_coding MGP_NODShiLtJ_T0080256.1 MGP_NODShiLtJ_G0031226.1 mouse_genomes_project 6 152634095 152651549 - Hebp1 protein_coding processed_transcript MGP_NODShiLtJ_T0080257.1 MGP_NODShiLtJ_G0031226.1 mouse_genomes_project 6 152636508 152686592 - Hebp1 protein_coding processed_transcript MGP_NODShiLtJ_T0080258.1 MGP_NODShiLtJ_G0031226.1 mouse_genomes_project 6 152648921 152651492 - Hebp1 protein_coding retained_intron MGP_NODShiLtJ_T0079705.1 MGP_NODShiLtJ_G0031075.1 mouse_genomes_project 6 140591674 140595362 - MGP_NODShiLtJ_P0079705 Tpi1 protein_coding protein_coding MGP_NODShiLtJ_T0079706.1 MGP_NODShiLtJ_G0031075.1 mouse_genomes_project 6 140592361 140592976 - Tpi1 protein_coding retained_intron MGP_NODShiLtJ_T0079707.1 MGP_NODShiLtJ_G0031075.1 mouse_genomes_project 6 140593538 140593930 - Tpi1 protein_coding retained_intron MGP_NODShiLtJ_T0079708.1 MGP_NODShiLtJ_G0031075.1 mouse_genomes_project 6 140593624 140595248 - Tpi1 protein_coding retained_intron MGP_NODShiLtJ_T0079709.1 MGP_NODShiLtJ_G0031075.1 mouse_genomes_project 6 140594553 140595244 - Tpi1 protein_coding retained_intron MGP_NODShiLtJ_T0015310.1 MGP_NODShiLtJ_G0013418.1 mouse_genomes_project 6 80495095 80495680 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015121.1 MGP_NODShiLtJ_G0013229.1 mouse_genomes_project 6 4881788 4882425 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077541.1 MGP_NODShiLtJ_G0030644.1 mouse_genomes_project 6 74662745 74764151 - MGP_NODShiLtJ_P0077541 protein_coding protein_coding MGP_NODShiLtJ_T0015516.1 MGP_NODShiLtJ_G0013624.1 mouse_genomes_project 6 154048324 154049384 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008670.1 MGP_NODShiLtJ_G0007000.1 mouse_genomes_project 6 152025504 152027939 - Gm43949 lincRNA lincRNA MGP_NODShiLtJ_T0000176.1 MGP_NODShiLtJ_G0000128.1 mouse_genomes_project 6 76977080 76977553 + MGP_NODShiLtJ_P0000176 Igkv12-98 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000177.1 MGP_NODShiLtJ_G0000128.1 mouse_genomes_project 6 76977080 76977553 + MGP_NODShiLtJ_P0000177 Igkv12-98 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0018147.1 MGP_NODShiLtJ_G0015510.1 mouse_genomes_project 6 130979667 130981895 - Gm44957 processed_transcript retained_intron MGP_NODShiLtJ_T0018148.1 MGP_NODShiLtJ_G0015510.1 mouse_genomes_project 6 130979682 130982382 - Gm44957 processed_transcript bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0080182.1 MGP_NODShiLtJ_G0031208.1 mouse_genomes_project 6 150222108 150223048 - MGP_NODShiLtJ_P0080182 Tas2r103 protein_coding protein_coding MGP_NODShiLtJ_T0080346.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155223210 155412489 - MGP_NODShiLtJ_P0080346 Eps8 protein_coding protein_coding MGP_NODShiLtJ_T0080347.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155223633 155318535 - MGP_NODShiLtJ_P0080347 Eps8 protein_coding protein_coding MGP_NODShiLtJ_T0080348.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155224143 155412489 - MGP_NODShiLtJ_P0080348 Eps8 protein_coding protein_coding MGP_NODShiLtJ_T0080349.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155246980 155411504 - MGP_NODShiLtJ_P0080349 Eps8 protein_coding protein_coding MGP_NODShiLtJ_T0080350.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155261705 155267087 - Eps8 protein_coding processed_transcript MGP_NODShiLtJ_T0080351.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155264470 155418100 - MGP_NODShiLtJ_P0080351 Eps8 protein_coding protein_coding MGP_NODShiLtJ_T0080352.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155264494 155267030 - Eps8 protein_coding retained_intron MGP_NODShiLtJ_T0080353.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155270370 155347653 - MGP_NODShiLtJ_P0080353 Eps8 protein_coding protein_coding MGP_NODShiLtJ_T0080354.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155275108 155412433 - Eps8 protein_coding processed_transcript MGP_NODShiLtJ_T0080355.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155282619 155285827 - Eps8 protein_coding retained_intron MGP_NODShiLtJ_T0080356.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155285376 155411504 - MGP_NODShiLtJ_P0080356 Eps8 protein_coding protein_coding MGP_NODShiLtJ_T0080357.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155287074 155412446 - MGP_NODShiLtJ_P0080357 Eps8 protein_coding protein_coding MGP_NODShiLtJ_T0080358.1 MGP_NODShiLtJ_G0031248.1 mouse_genomes_project 6 155314661 155318277 - Eps8 protein_coding retained_intron MGP_NODShiLtJ_T0015208.1 MGP_NODShiLtJ_G0013316.1 mouse_genomes_project 6 52637443 52638749 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000166.1 MGP_NODShiLtJ_G0000121.1 mouse_genomes_project 6 76626204 76626930 + MGP_NODShiLtJ_P0000166 Igkv2-112 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000167.1 MGP_NODShiLtJ_G0000121.1 mouse_genomes_project 6 76626204 76626930 + MGP_NODShiLtJ_P0000167 Igkv2-112 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0004898.1 MGP_NODShiLtJ_G0004200.1 mouse_genomes_project 6 57379943 57399224 + Hoxaas3 antisense antisense MGP_NODShiLtJ_T0004899.1 MGP_NODShiLtJ_G0004200.1 mouse_genomes_project 6 57379961 57421387 + Hoxaas3 antisense antisense MGP_NODShiLtJ_T0004902.1 MGP_NODShiLtJ_G0004200.1 mouse_genomes_project 6 57407411 57419867 + Hoxaas3 antisense antisense MGP_NODShiLtJ_T0076793.1 MGP_NODShiLtJ_G0030428.1 mouse_genomes_project 6 44276196 44279692 - MGP_NODShiLtJ_P0076793 Gm4744 protein_coding protein_coding MGP_NODShiLtJ_T0010696.1 MGP_NODShiLtJ_G0008829.1 mouse_genomes_project 6 132927981 132928053 + Mir7044 miRNA miRNA MGP_NODShiLtJ_T0002443.1 MGP_NODShiLtJ_G0002351.1 mouse_genomes_project 6 44998622 45010285 + MGP_NODShiLtJ_P0002443 Trbc2 TR_C_gene TR_C_gene MGP_NODShiLtJ_T0015377.1 MGP_NODShiLtJ_G0013485.1 mouse_genomes_project 6 108049904 108050271 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001956.1 MGP_NODShiLtJ_G0001868.1 mouse_genomes_project 6 68872698 68874735 + TEC TEC MGP_NODShiLtJ_T0080014.1 MGP_NODShiLtJ_G0031134.1 mouse_genomes_project 6 144537723 144547622 - Fkbp4 protein_coding retained_intron MGP_NODShiLtJ_T0080015.1 MGP_NODShiLtJ_G0031134.1 mouse_genomes_project 6 144538844 144547622 - MGP_NODShiLtJ_P0080015 Fkbp4 protein_coding protein_coding MGP_NODShiLtJ_T0080016.1 MGP_NODShiLtJ_G0031134.1 mouse_genomes_project 6 144542156 144547085 - MGP_NODShiLtJ_P0080016 Fkbp4 protein_coding protein_coding MGP_NODShiLtJ_T0080017.1 MGP_NODShiLtJ_G0031134.1 mouse_genomes_project 6 144542703 144546598 - MGP_NODShiLtJ_P0080017 Fkbp4 protein_coding protein_coding MGP_NODShiLtJ_T0100664.1 MGP_NODShiLtJ_G0039058.1 mouse_genomes_project 6 47656235 47656366 + Gm22939 snoRNA snoRNA MGP_NODShiLtJ_T0002044.1 MGP_NODShiLtJ_G0001956.1 mouse_genomes_project 6 103671472 103673402 + TEC TEC MGP_NODShiLtJ_T0077410.1 MGP_NODShiLtJ_G0030605.1 mouse_genomes_project 6 63185014 63217271 - MGP_NODShiLtJ_P0077410 Ppm1k protein_coding protein_coding MGP_NODShiLtJ_T0077411.1 MGP_NODShiLtJ_G0030605.1 mouse_genomes_project 6 63192090 63194101 - MGP_NODShiLtJ_P0077411 Ppm1k protein_coding protein_coding MGP_NODShiLtJ_T0077412.1 MGP_NODShiLtJ_G0030605.1 mouse_genomes_project 6 63216279 63217313 - Ppm1k protein_coding processed_transcript MGP_NODShiLtJ_T0001943.1 MGP_NODShiLtJ_G0001855.1 mouse_genomes_project 6 57797089 57799772 + TEC TEC MGP_NODShiLtJ_T0000310.1 MGP_NODShiLtJ_G0000248.1 mouse_genomes_project 6 78076485 78076787 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0015176.1 MGP_NODShiLtJ_G0013284.1 mouse_genomes_project 6 39388666 39388871 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080108.1 MGP_NODShiLtJ_G0031162.1 mouse_genomes_project 6 146083370 146087644 - MGP_NODShiLtJ_P0080108 Klrc3 protein_coding protein_coding MGP_NODShiLtJ_T0080109.1 MGP_NODShiLtJ_G0031162.1 mouse_genomes_project 6 146083370 146087644 - MGP_NODShiLtJ_P0080109 Klrc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080110.1 MGP_NODShiLtJ_G0031162.1 mouse_genomes_project 6 146083391 146087644 - MGP_NODShiLtJ_P0080110 Klrc3 protein_coding protein_coding MGP_NODShiLtJ_T0001957.1 MGP_NODShiLtJ_G0001869.1 mouse_genomes_project 6 79625888 79628327 - TEC TEC MGP_NODShiLtJ_T0080169.1 MGP_NODShiLtJ_G0031195.1 mouse_genomes_project 6 149759009 149760042 - MGP_NODShiLtJ_P0080169 Tas2r115 protein_coding protein_coding MGP_NODShiLtJ_T0008652.1 MGP_NODShiLtJ_G0006987.1 mouse_genomes_project 6 142264308 142269305 + lincRNA lincRNA MGP_NODShiLtJ_T0015462.1 MGP_NODShiLtJ_G0013570.1 mouse_genomes_project 6 140736086 140736537 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000179.1 MGP_NODShiLtJ_G0000130.1 mouse_genomes_project 6 77125701 77126279 + MGP_NODShiLtJ_P0000179 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0008504.1 MGP_NODShiLtJ_G0006867.1 mouse_genomes_project 6 52965141 52987665 - lincRNA lincRNA MGP_NODShiLtJ_T0101993.1 MGP_NODShiLtJ_G0040161.1 mouse_genomes_project 6 46845948 46846474 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000295.1 MGP_NODShiLtJ_G0000233.1 mouse_genomes_project 6 76856264 76856551 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0002001.1 MGP_NODShiLtJ_G0001913.1 mouse_genomes_project 6 96899757 96902058 + TEC TEC MGP_NODShiLtJ_T0015365.1 MGP_NODShiLtJ_G0013473.1 mouse_genomes_project 6 104247943 104248940 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005015.1 MGP_NODShiLtJ_G0004275.1 mouse_genomes_project 6 134486112 134493226 + Gm44317 antisense antisense MGP_NODShiLtJ_T0015332.1 MGP_NODShiLtJ_G0013440.1 mouse_genomes_project 6 93176145 93176817 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002062.1 MGP_NODShiLtJ_G0001974.1 mouse_genomes_project 6 113840227 113841186 - TEC TEC MGP_NODShiLtJ_T0078088.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96430578 96558904 - MGP_NODShiLtJ_P0078088 Sfxn5 protein_coding protein_coding MGP_NODShiLtJ_T0078089.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96448067 96483636 - Sfxn5 protein_coding processed_transcript MGP_NODShiLtJ_T0078090.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96453128 96558901 - MGP_NODShiLtJ_P0078090 Sfxn5 protein_coding protein_coding MGP_NODShiLtJ_T0078091.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96487420 96558888 - Sfxn5 protein_coding retained_intron MGP_NODShiLtJ_T0078092.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96513681 96558901 - Sfxn5 protein_coding processed_transcript MGP_NODShiLtJ_T0078093.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96519053 96558904 - MGP_NODShiLtJ_P0078093 Sfxn5 protein_coding protein_coding MGP_NODShiLtJ_T0078094.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96519055 96544509 - Sfxn5 protein_coding processed_transcript MGP_NODShiLtJ_T0078095.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96542980 96558232 - MGP_NODShiLtJ_P0078095 Sfxn5 protein_coding protein_coding MGP_NODShiLtJ_T0078096.1 MGP_NODShiLtJ_G0030758.1 mouse_genomes_project 6 96554426 96558904 - Sfxn5 protein_coding retained_intron MGP_NODShiLtJ_T0102004.1 MGP_NODShiLtJ_G0040172.1 mouse_genomes_project 6 64130178 64131104 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008439.1 MGP_NODShiLtJ_G0006826.1 mouse_genomes_project 6 12460436 12667039 + lincRNA lincRNA MGP_NODShiLtJ_T0008440.1 MGP_NODShiLtJ_G0006826.1 mouse_genomes_project 6 12460479 12486045 + lincRNA lincRNA MGP_NODShiLtJ_T0077834.1 MGP_NODShiLtJ_G0030711.1 mouse_genomes_project 6 92961286 93016419 + MGP_NODShiLtJ_P0077834 Eva1a protein_coding protein_coding MGP_NODShiLtJ_T0077835.1 MGP_NODShiLtJ_G0030711.1 mouse_genomes_project 6 92961866 93017625 + MGP_NODShiLtJ_P0077835 Eva1a protein_coding protein_coding MGP_NODShiLtJ_T0077836.1 MGP_NODShiLtJ_G0030711.1 mouse_genomes_project 6 92965196 92970596 + Eva1a protein_coding processed_transcript MGP_NODShiLtJ_T0077837.1 MGP_NODShiLtJ_G0030711.1 mouse_genomes_project 6 92975800 93016684 + MGP_NODShiLtJ_P0077837 Eva1a protein_coding protein_coding MGP_NODShiLtJ_T0001991.1 MGP_NODShiLtJ_G0001903.1 mouse_genomes_project 6 91132815 91135093 + TEC TEC MGP_NODShiLtJ_T0101367.1 MGP_NODShiLtJ_G0039589.1 mouse_genomes_project 6 137261107 137537902 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101368.1 MGP_NODShiLtJ_G0039589.1 mouse_genomes_project 6 137261211 137538924 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0008624.1 MGP_NODShiLtJ_G0006961.1 mouse_genomes_project 6 120864565 120969917 - Gm44398 lincRNA lincRNA MGP_NODShiLtJ_T0100655.1 MGP_NODShiLtJ_G0039049.1 mouse_genomes_project 6 25920066 25920197 - Gm22267 snoRNA snoRNA MGP_NODShiLtJ_T0015257.1 MGP_NODShiLtJ_G0013365.1 mouse_genomes_project 6 69348811 69349120 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077927.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94155434 94170589 + MGP_NODShiLtJ_P0077927 Rtkn protein_coding protein_coding MGP_NODShiLtJ_T0077928.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94155783 94173592 + MGP_NODShiLtJ_P0077928 Rtkn protein_coding protein_coding MGP_NODShiLtJ_T0077929.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94157024 94173592 + MGP_NODShiLtJ_P0077929 Rtkn protein_coding protein_coding MGP_NODShiLtJ_T0077930.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94157045 94173592 + MGP_NODShiLtJ_P0077930 Rtkn protein_coding protein_coding MGP_NODShiLtJ_T0077931.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94158110 94173597 + MGP_NODShiLtJ_P0077931 Rtkn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0077932.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94163439 94169185 + MGP_NODShiLtJ_P0077932 Rtkn protein_coding protein_coding MGP_NODShiLtJ_T0077933.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94163611 94168707 + MGP_NODShiLtJ_P0077933 Rtkn protein_coding protein_coding MGP_NODShiLtJ_T0077934.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94168866 94171271 + Rtkn protein_coding retained_intron MGP_NODShiLtJ_T0077936.1 MGP_NODShiLtJ_G0030731.1 mouse_genomes_project 6 94171767 94173221 + Rtkn protein_coding retained_intron MGP_NODShiLtJ_T0010659.1 MGP_NODShiLtJ_G0008792.1 mouse_genomes_project 6 52625791 52625868 - Mir704 miRNA miRNA MGP_NODShiLtJ_T0079295.1 MGP_NODShiLtJ_G0030993.1 mouse_genomes_project 6 133361219 133427734 - MGP_NODShiLtJ_P0079295 Ankrd26 protein_coding protein_coding MGP_NODShiLtJ_T0079296.1 MGP_NODShiLtJ_G0030993.1 mouse_genomes_project 6 133378525 133383579 - Ankrd26 protein_coding retained_intron MGP_NODShiLtJ_T0079297.1 MGP_NODShiLtJ_G0030993.1 mouse_genomes_project 6 133406627 133414220 - Ankrd26 protein_coding retained_intron MGP_NODShiLtJ_T0008441.1 MGP_NODShiLtJ_G0006827.1 mouse_genomes_project 6 15758242 15793478 + Gm43998 lincRNA lincRNA MGP_NODShiLtJ_T0076779.1 MGP_NODShiLtJ_G0030423.1 mouse_genomes_project 6 43892805 43893801 - MGP_NODShiLtJ_P0076779 Tas2r138 protein_coding protein_coding MGP_NODShiLtJ_T0008577.1 MGP_NODShiLtJ_G0006926.1 mouse_genomes_project 6 97825167 97831014 - 2310040G24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008578.1 MGP_NODShiLtJ_G0006926.1 mouse_genomes_project 6 97825167 97831037 - 2310040G24Rik lincRNA lincRNA MGP_NODShiLtJ_T0002130.1 MGP_NODShiLtJ_G0002042.1 mouse_genomes_project 6 163821145 163824336 - TEC TEC MGP_NODShiLtJ_T0079998.1 MGP_NODShiLtJ_G0031132.1 mouse_genomes_project 6 144503846 144512753 + MGP_NODShiLtJ_P0079998 protein_coding protein_coding MGP_NODShiLtJ_T0079999.1 MGP_NODShiLtJ_G0031132.1 mouse_genomes_project 6 144503858 144512646 + MGP_NODShiLtJ_P0079999 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080000.1 MGP_NODShiLtJ_G0031132.1 mouse_genomes_project 6 144504302 144513462 + MGP_NODShiLtJ_P0080000 protein_coding protein_coding MGP_NODShiLtJ_T0080001.1 MGP_NODShiLtJ_G0031132.1 mouse_genomes_project 6 144504502 144513462 + MGP_NODShiLtJ_P0080001 protein_coding protein_coding MGP_NODShiLtJ_T0080002.1 MGP_NODShiLtJ_G0031132.1 mouse_genomes_project 6 144504580 144513462 + protein_coding retained_intron MGP_NODShiLtJ_T0080003.1 MGP_NODShiLtJ_G0031132.1 mouse_genomes_project 6 144504825 144522332 + MGP_NODShiLtJ_P0080003 protein_coding non_stop_decay MGP_NODShiLtJ_T0078463.1 MGP_NODShiLtJ_G0030825.1 mouse_genomes_project 6 100917132 101127738 - MGP_NODShiLtJ_P0078463 Chchd6 protein_coding protein_coding MGP_NODShiLtJ_T0078464.1 MGP_NODShiLtJ_G0030825.1 mouse_genomes_project 6 100917137 101127738 - MGP_NODShiLtJ_P0078464 Chchd6 protein_coding protein_coding MGP_NODShiLtJ_T0078465.1 MGP_NODShiLtJ_G0030825.1 mouse_genomes_project 6 100952047 101127690 - Chchd6 protein_coding retained_intron MGP_NODShiLtJ_T0078466.1 MGP_NODShiLtJ_G0030825.1 mouse_genomes_project 6 101103365 101127697 - MGP_NODShiLtJ_P0078466 Chchd6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004847.1 MGP_NODShiLtJ_G0004162.1 mouse_genomes_project 6 16411641 16528377 - Gm4876 antisense antisense MGP_NODShiLtJ_T0004848.1 MGP_NODShiLtJ_G0004162.1 mouse_genomes_project 6 16422872 16528721 - Gm4876 antisense antisense MGP_NODShiLtJ_T0004849.1 MGP_NODShiLtJ_G0004162.1 mouse_genomes_project 6 16443699 16528353 - Gm4876 antisense antisense MGP_NODShiLtJ_T0004850.1 MGP_NODShiLtJ_G0004162.1 mouse_genomes_project 6 16456672 16528505 - Gm4876 antisense antisense MGP_NODShiLtJ_T0004851.1 MGP_NODShiLtJ_G0004162.1 mouse_genomes_project 6 16517919 16528634 - Gm4876 antisense antisense MGP_NODShiLtJ_T0004852.1 MGP_NODShiLtJ_G0004162.1 mouse_genomes_project 6 16528276 16528698 - Gm4876 antisense antisense MGP_NODShiLtJ_T0001866.1 MGP_NODShiLtJ_G0001778.1 mouse_genomes_project 6 1412351 1413076 - TEC TEC MGP_NODShiLtJ_T0008614.1 MGP_NODShiLtJ_G0006953.1 mouse_genomes_project 6 112911061 112912764 + Gm44107 lincRNA lincRNA MGP_NODShiLtJ_T0001916.1 MGP_NODShiLtJ_G0001828.1 mouse_genomes_project 6 46977170 46977798 + TEC TEC MGP_NODShiLtJ_T0080275.1 MGP_NODShiLtJ_G0031231.1 mouse_genomes_project 6 153235533 153717770 - MGP_NODShiLtJ_P0080275 Grin2b protein_coding protein_coding MGP_NODShiLtJ_T0080276.1 MGP_NODShiLtJ_G0031231.1 mouse_genomes_project 6 153251853 153718148 - MGP_NODShiLtJ_P0080276 Grin2b protein_coding protein_coding MGP_NODShiLtJ_T0080277.1 MGP_NODShiLtJ_G0031231.1 mouse_genomes_project 6 153391959 153718148 - MGP_NODShiLtJ_P0080277 Grin2b protein_coding protein_coding MGP_NODShiLtJ_T0080278.1 MGP_NODShiLtJ_G0031231.1 mouse_genomes_project 6 153585682 153716533 - MGP_NODShiLtJ_P0080278 Grin2b protein_coding protein_coding MGP_NODShiLtJ_T0080279.1 MGP_NODShiLtJ_G0031231.1 mouse_genomes_project 6 153585685 153718148 - MGP_NODShiLtJ_P0080279 Grin2b protein_coding protein_coding MGP_NODShiLtJ_T0080280.1 MGP_NODShiLtJ_G0031231.1 mouse_genomes_project 6 153585685 153718148 - MGP_NODShiLtJ_P0080280 Grin2b protein_coding protein_coding MGP_NODShiLtJ_T0080281.1 MGP_NODShiLtJ_G0031231.1 mouse_genomes_project 6 153716406 153718015 - Grin2b protein_coding processed_transcript MGP_NODShiLtJ_T0078672.1 MGP_NODShiLtJ_G0030878.1 mouse_genomes_project 6 108938454 109177454 - MGP_NODShiLtJ_P0078672 Fam19a4 protein_coding protein_coding MGP_NODShiLtJ_T0078673.1 MGP_NODShiLtJ_G0030878.1 mouse_genomes_project 6 109173666 109177434 - Fam19a4 protein_coding retained_intron MGP_NODShiLtJ_T0080047.1 MGP_NODShiLtJ_G0031144.1 mouse_genomes_project 6 145157354 145168136 + MGP_NODShiLtJ_P0080047 protein_coding protein_coding MGP_NODShiLtJ_T0080048.1 MGP_NODShiLtJ_G0031144.1 mouse_genomes_project 6 145157364 145166832 + MGP_NODShiLtJ_P0080048 protein_coding protein_coding MGP_NODShiLtJ_T0015323.1 MGP_NODShiLtJ_G0013431.1 mouse_genomes_project 6 85898893 85900165 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077907.1 MGP_NODShiLtJ_G0030725.1 mouse_genomes_project 6 94121653 94128269 + MGP_NODShiLtJ_P0077907 protein_coding protein_coding MGP_NODShiLtJ_T0077909.1 MGP_NODShiLtJ_G0030725.1 mouse_genomes_project 6 94121710 94123907 + protein_coding retained_intron MGP_NODShiLtJ_T0077910.1 MGP_NODShiLtJ_G0030725.1 mouse_genomes_project 6 94126975 94127709 + protein_coding retained_intron MGP_NODShiLtJ_T0008521.1 MGP_NODShiLtJ_G0006881.1 mouse_genomes_project 6 56533511 56534766 - 0610033M10Rik lincRNA lincRNA MGP_NODShiLtJ_T0008522.1 MGP_NODShiLtJ_G0006881.1 mouse_genomes_project 6 56533750 56534580 - 0610033M10Rik lincRNA lincRNA MGP_NODShiLtJ_T0002638.1 MGP_NODShiLtJ_G0002520.1 mouse_genomes_project 6 44543137 44543811 + MGP_NODShiLtJ_P0002638 Trbv19 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0079137.1 MGP_NODShiLtJ_G0030964.1 mouse_genomes_project 6 130420524 130442671 - MGP_NODShiLtJ_P0079137 Efcab12 protein_coding protein_coding MGP_NODShiLtJ_T0079138.1 MGP_NODShiLtJ_G0030964.1 mouse_genomes_project 6 130420691 130442671 - MGP_NODShiLtJ_P0079138 Efcab12 protein_coding protein_coding MGP_NODShiLtJ_T0079139.1 MGP_NODShiLtJ_G0030964.1 mouse_genomes_project 6 130420691 130442671 - MGP_NODShiLtJ_P0079139 Efcab12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079725.1 MGP_NODShiLtJ_G0031078.1 mouse_genomes_project 6 140615521 140621548 - MGP_NODShiLtJ_P0079725 Gnb3 protein_coding protein_coding MGP_NODShiLtJ_T0079726.1 MGP_NODShiLtJ_G0031078.1 mouse_genomes_project 6 140615528 140621230 - Gnb3 protein_coding retained_intron MGP_NODShiLtJ_T0079727.1 MGP_NODShiLtJ_G0031078.1 mouse_genomes_project 6 140615960 140617570 - Gnb3 protein_coding processed_transcript MGP_NODShiLtJ_T0079728.1 MGP_NODShiLtJ_G0031078.1 mouse_genomes_project 6 140620371 140621356 - Gnb3 protein_coding retained_intron MGP_NODShiLtJ_T0015127.1 MGP_NODShiLtJ_G0013235.1 mouse_genomes_project 6 7839289 7840352 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002691.1 MGP_NODShiLtJ_G0002564.1 mouse_genomes_project 6 44581688 44582155 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0078815.1 MGP_NODShiLtJ_G0030906.1 mouse_genomes_project 6 121872951 121966911 - MGP_NODShiLtJ_P0078815 Sumf1 protein_coding protein_coding MGP_NODShiLtJ_T0078816.1 MGP_NODShiLtJ_G0030906.1 mouse_genomes_project 6 121874270 121901873 - Sumf1 protein_coding processed_transcript MGP_NODShiLtJ_T0078817.1 MGP_NODShiLtJ_G0030906.1 mouse_genomes_project 6 121874399 121966885 - MGP_NODShiLtJ_P0078817 Sumf1 protein_coding protein_coding MGP_NODShiLtJ_T0078818.1 MGP_NODShiLtJ_G0030906.1 mouse_genomes_project 6 121874399 121966885 - MGP_NODShiLtJ_P0078818 Sumf1 protein_coding protein_coding MGP_NODShiLtJ_T0078819.1 MGP_NODShiLtJ_G0030906.1 mouse_genomes_project 6 121892503 121920428 - MGP_NODShiLtJ_P0078819 Sumf1 protein_coding protein_coding MGP_NODShiLtJ_T0078820.1 MGP_NODShiLtJ_G0030906.1 mouse_genomes_project 6 121920045 121927947 - Sumf1 protein_coding retained_intron MGP_NODShiLtJ_T0079863.1 MGP_NODShiLtJ_G0031100.1 mouse_genomes_project 6 141103438 141111180 - MGP_NODShiLtJ_P0079863 Tuba3a protein_coding protein_coding MGP_NODShiLtJ_T0075914.1 MGP_NODShiLtJ_G0030254.1 mouse_genomes_project 6 5272452 5480483 - MGP_NODShiLtJ_P0075914 Col28a1 protein_coding protein_coding MGP_NODShiLtJ_T0075915.1 MGP_NODShiLtJ_G0030254.1 mouse_genomes_project 6 5296920 5298396 - Col28a1 protein_coding processed_transcript MGP_NODShiLtJ_T0075916.1 MGP_NODShiLtJ_G0030254.1 mouse_genomes_project 6 5356610 5361410 - Col28a1 protein_coding retained_intron MGP_NODShiLtJ_T0008603.1 MGP_NODShiLtJ_G0006945.1 mouse_genomes_project 6 103059141 103059910 + 1810044D09Rik lincRNA lincRNA MGP_NODShiLtJ_T0076836.1 MGP_NODShiLtJ_G0030450.1 mouse_genomes_project 6 45772992 45775578 + MGP_NODShiLtJ_P0076836 Tmem139 protein_coding protein_coding MGP_NODShiLtJ_T0018164.1 MGP_NODShiLtJ_G0015517.1 mouse_genomes_project 6 161320651 161339915 + Gm7457 processed_transcript antisense MGP_NODShiLtJ_T0018165.1 MGP_NODShiLtJ_G0015517.1 mouse_genomes_project 6 161320804 161323353 + Gm7457 processed_transcript retained_intron MGP_NODShiLtJ_T0015210.1 MGP_NODShiLtJ_G0013318.1 mouse_genomes_project 6 52804041 52804915 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079140.1 MGP_NODShiLtJ_G0030965.1 mouse_genomes_project 6 130444955 130457413 - MGP_NODShiLtJ_P0079140 Mbd4 protein_coding protein_coding MGP_NODShiLtJ_T0079141.1 MGP_NODShiLtJ_G0030965.1 mouse_genomes_project 6 130445457 130452751 - Mbd4 protein_coding processed_transcript MGP_NODShiLtJ_T0079142.1 MGP_NODShiLtJ_G0030965.1 mouse_genomes_project 6 130446601 130457407 - MGP_NODShiLtJ_P0079142 Mbd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079143.1 MGP_NODShiLtJ_G0030965.1 mouse_genomes_project 6 130446601 130453012 - MGP_NODShiLtJ_P0079143 Mbd4 protein_coding protein_coding MGP_NODShiLtJ_T0079144.1 MGP_NODShiLtJ_G0030965.1 mouse_genomes_project 6 130451731 130457330 - MGP_NODShiLtJ_P0079144 Mbd4 protein_coding protein_coding MGP_NODShiLtJ_T0015440.1 MGP_NODShiLtJ_G0013548.1 mouse_genomes_project 6 134839378 134840262 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101977.1 MGP_NODShiLtJ_G0040145.1 mouse_genomes_project 6 36895307 36902295 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002136.1 MGP_NODShiLtJ_G0002048.1 mouse_genomes_project 6 165513494 165514736 + TEC TEC MGP_NODShiLtJ_T0004842.1 MGP_NODShiLtJ_G0004158.1 mouse_genomes_project 6 3072182 3087123 - 1700019G24Rik antisense antisense MGP_NODShiLtJ_T0002035.1 MGP_NODShiLtJ_G0001947.1 mouse_genomes_project 6 102782641 102783235 - TEC TEC MGP_NODShiLtJ_T0076471.1 MGP_NODShiLtJ_G0030357.1 mouse_genomes_project 6 33834247 33885488 - MGP_NODShiLtJ_P0076471 Podxl protein_coding protein_coding MGP_NODShiLtJ_T0076472.1 MGP_NODShiLtJ_G0030357.1 mouse_genomes_project 6 33837752 33839072 - Podxl protein_coding processed_transcript MGP_NODShiLtJ_T0100698.1 MGP_NODShiLtJ_G0039092.1 mouse_genomes_project 6 112906451 112906585 - Gm23234 snoRNA snoRNA MGP_NODShiLtJ_T0008626.1 MGP_NODShiLtJ_G0006963.1 mouse_genomes_project 6 126617199 126619024 + 1700054K19Rik lincRNA lincRNA MGP_NODShiLtJ_T0079233.1 MGP_NODShiLtJ_G0030980.1 mouse_genomes_project 6 131352854 131399213 - MGP_NODShiLtJ_P0079233 Rassf4 protein_coding protein_coding MGP_NODShiLtJ_T0079234.1 MGP_NODShiLtJ_G0030980.1 mouse_genomes_project 6 131358084 131369408 - MGP_NODShiLtJ_P0079234 Rassf4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079235.1 MGP_NODShiLtJ_G0030980.1 mouse_genomes_project 6 131359070 131399070 - MGP_NODShiLtJ_P0079235 Rassf4 protein_coding protein_coding MGP_NODShiLtJ_T0079236.1 MGP_NODShiLtJ_G0030980.1 mouse_genomes_project 6 131359334 131360845 - Rassf4 protein_coding processed_transcript MGP_NODShiLtJ_T0079237.1 MGP_NODShiLtJ_G0030980.1 mouse_genomes_project 6 131362767 131399050 - Rassf4 protein_coding retained_intron MGP_NODShiLtJ_T0079238.1 MGP_NODShiLtJ_G0030980.1 mouse_genomes_project 6 131365080 131367775 - Rassf4 protein_coding retained_intron MGP_NODShiLtJ_T0079239.1 MGP_NODShiLtJ_G0030980.1 mouse_genomes_project 6 131365745 131399032 - MGP_NODShiLtJ_P0079239 Rassf4 protein_coding protein_coding MGP_NODShiLtJ_T0079240.1 MGP_NODShiLtJ_G0030980.1 mouse_genomes_project 6 131365816 131399059 - MGP_NODShiLtJ_P0079240 Rassf4 protein_coding protein_coding MGP_NODShiLtJ_T0015463.1 MGP_NODShiLtJ_G0013571.1 mouse_genomes_project 6 140935047 140940516 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015193.1 MGP_NODShiLtJ_G0013301.1 mouse_genomes_project 6 44951000 44951376 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076425.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32918826 32958799 - MGP_NODShiLtJ_P0076425 Cep41 protein_coding protein_coding MGP_NODShiLtJ_T0076426.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32918828 32958743 - MGP_NODShiLtJ_P0076426 Cep41 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076427.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32919747 32958745 - MGP_NODShiLtJ_P0076427 Cep41 protein_coding protein_coding MGP_NODShiLtJ_T0076428.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32919748 32934640 - Cep41 protein_coding processed_transcript MGP_NODShiLtJ_T0076429.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32920901 32922179 - Cep41 protein_coding retained_intron MGP_NODShiLtJ_T0076430.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32923751 32926654 - Cep41 protein_coding retained_intron MGP_NODShiLtJ_T0076431.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32926266 32958138 - MGP_NODShiLtJ_P0076431 Cep41 protein_coding protein_coding MGP_NODShiLtJ_T0076432.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32931312 32958726 - MGP_NODShiLtJ_P0076432 Cep41 protein_coding protein_coding MGP_NODShiLtJ_T0076433.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32931598 32945818 - MGP_NODShiLtJ_P0076433 Cep41 protein_coding protein_coding MGP_NODShiLtJ_T0076434.1 MGP_NODShiLtJ_G0030351.1 mouse_genomes_project 6 32944372 32958750 - MGP_NODShiLtJ_P0076434 Cep41 protein_coding protein_coding MGP_NODShiLtJ_T0001925.1 MGP_NODShiLtJ_G0001837.1 mouse_genomes_project 6 49595751 49596306 + TEC TEC MGP_NODShiLtJ_T0080180.1 MGP_NODShiLtJ_G0031206.1 mouse_genomes_project 6 150132462 150133427 + MGP_NODShiLtJ_P0080180 Tas2r129 protein_coding protein_coding MGP_NODShiLtJ_T0077582.1 MGP_NODShiLtJ_G0030655.1 mouse_genomes_project 6 75710789 75712522 - MGP_NODShiLtJ_P0077582 Tacstd2 protein_coding protein_coding MGP_NODShiLtJ_T0080220.1 MGP_NODShiLtJ_G0031219.1 mouse_genomes_project 6 152265048 152294557 + MGP_NODShiLtJ_P0080220 Crebl2 protein_coding protein_coding MGP_NODShiLtJ_T0080221.1 MGP_NODShiLtJ_G0031219.1 mouse_genomes_project 6 152265122 152284255 + Crebl2 protein_coding retained_intron MGP_NODShiLtJ_T0080222.1 MGP_NODShiLtJ_G0031219.1 mouse_genomes_project 6 152265149 152291792 + MGP_NODShiLtJ_P0080222 Crebl2 protein_coding protein_coding MGP_NODShiLtJ_T0080223.1 MGP_NODShiLtJ_G0031219.1 mouse_genomes_project 6 152286799 152290221 + Crebl2 protein_coding retained_intron MGP_NODShiLtJ_T0080461.1 MGP_NODShiLtJ_G0031266.1 mouse_genomes_project 6 160101921 160168959 - MGP_NODShiLtJ_P0080461 Gm5724 protein_coding protein_coding MGP_NODShiLtJ_T0011565.1 MGP_NODShiLtJ_G0009698.1 mouse_genomes_project 6 160694327 160694616 - Gm25430 misc_RNA misc_RNA MGP_NODShiLtJ_T0015137.1 MGP_NODShiLtJ_G0013245.1 mouse_genomes_project 6 12612821 12613210 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078073.1 MGP_NODShiLtJ_G0030754.1 mouse_genomes_project 6 95775288 96252825 - MGP_NODShiLtJ_P0078073 Exoc6b protein_coding protein_coding MGP_NODShiLtJ_T0078074.1 MGP_NODShiLtJ_G0030754.1 mouse_genomes_project 6 95985692 96252825 - Exoc6b protein_coding retained_intron MGP_NODShiLtJ_T0078075.1 MGP_NODShiLtJ_G0030754.1 mouse_genomes_project 6 95986598 96252769 - Exoc6b protein_coding retained_intron MGP_NODShiLtJ_T0078076.1 MGP_NODShiLtJ_G0030754.1 mouse_genomes_project 6 96006635 96252814 - MGP_NODShiLtJ_P0078076 Exoc6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078077.1 MGP_NODShiLtJ_G0030754.1 mouse_genomes_project 6 96047875 96051882 - Exoc6b protein_coding retained_intron MGP_NODShiLtJ_T0078078.1 MGP_NODShiLtJ_G0030754.1 mouse_genomes_project 6 96107306 96252814 - Exoc6b protein_coding processed_transcript MGP_NODShiLtJ_T0078079.1 MGP_NODShiLtJ_G0030754.1 mouse_genomes_project 6 96150262 96252780 - Exoc6b protein_coding retained_intron MGP_NODShiLtJ_T0078080.1 MGP_NODShiLtJ_G0030754.1 mouse_genomes_project 6 96172923 96252787 - Exoc6b protein_coding retained_intron MGP_NODShiLtJ_T0099425.1 MGP_NODShiLtJ_G0037819.1 mouse_genomes_project 6 45068288 45068350 - Gm27549 snRNA snRNA MGP_NODShiLtJ_T0099456.1 MGP_NODShiLtJ_G0037850.1 mouse_genomes_project 6 135429978 135430084 - Gm24592 snRNA snRNA MGP_NODShiLtJ_T0078554.1 MGP_NODShiLtJ_G0030852.1 mouse_genomes_project 6 102980837 103028740 - MGP_NODShiLtJ_P0078554 Wnt7a protein_coding protein_coding MGP_NODShiLtJ_T0078555.1 MGP_NODShiLtJ_G0030852.1 mouse_genomes_project 6 102980839 102981954 - Wnt7a protein_coding processed_transcript MGP_NODShiLtJ_T0078556.1 MGP_NODShiLtJ_G0030852.1 mouse_genomes_project 6 102980841 102981928 - Wnt7a protein_coding processed_transcript MGP_NODShiLtJ_T0015290.1 MGP_NODShiLtJ_G0013398.1 mouse_genomes_project 6 75125171 75125474 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015508.1 MGP_NODShiLtJ_G0013616.1 mouse_genomes_project 6 150915412 150915644 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100697.1 MGP_NODShiLtJ_G0039091.1 mouse_genomes_project 6 109971680 109971823 + Gm23703 snoRNA snoRNA MGP_NODShiLtJ_T0079376.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134881341 134884634 - protein_coding retained_intron MGP_NODShiLtJ_T0079377.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134881341 135038788 - MGP_NODShiLtJ_P0079377 protein_coding protein_coding MGP_NODShiLtJ_T0079378.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134881343 135038771 - MGP_NODShiLtJ_P0079378 protein_coding protein_coding MGP_NODShiLtJ_T0079379.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134881343 135038771 - MGP_NODShiLtJ_P0079379 protein_coding protein_coding MGP_NODShiLtJ_T0079380.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134881993 135037775 - MGP_NODShiLtJ_P0079380 protein_coding protein_coding MGP_NODShiLtJ_T0079381.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134881993 135037775 - MGP_NODShiLtJ_P0079381 protein_coding protein_coding MGP_NODShiLtJ_T0079382.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134883951 134894445 - MGP_NODShiLtJ_P0079382 protein_coding protein_coding MGP_NODShiLtJ_T0079383.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134884497 134895645 - MGP_NODShiLtJ_P0079383 protein_coding protein_coding MGP_NODShiLtJ_T0079384.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134887205 134891700 - MGP_NODShiLtJ_P0079384 protein_coding protein_coding MGP_NODShiLtJ_T0079385.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134887205 134891699 - MGP_NODShiLtJ_P0079385 protein_coding protein_coding MGP_NODShiLtJ_T0079386.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134888140 134891207 - protein_coding retained_intron MGP_NODShiLtJ_T0079387.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134895455 134906417 - MGP_NODShiLtJ_P0079387 protein_coding protein_coding MGP_NODShiLtJ_T0079388.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134895610 134906096 - MGP_NODShiLtJ_P0079388 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079389.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134895730 134898097 - protein_coding retained_intron MGP_NODShiLtJ_T0079390.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134902319 134908145 - protein_coding retained_intron MGP_NODShiLtJ_T0079391.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134908313 134909989 - protein_coding retained_intron MGP_NODShiLtJ_T0079392.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134909641 134935099 - MGP_NODShiLtJ_P0079392 protein_coding protein_coding MGP_NODShiLtJ_T0079393.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134909648 134914161 - MGP_NODShiLtJ_P0079393 protein_coding protein_coding MGP_NODShiLtJ_T0079394.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134910859 134976252 - MGP_NODShiLtJ_P0079394 protein_coding protein_coding MGP_NODShiLtJ_T0079395.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134911640 135038723 - protein_coding retained_intron MGP_NODShiLtJ_T0079396.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134911640 134976211 - protein_coding retained_intron MGP_NODShiLtJ_T0079397.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134914086 134923985 - MGP_NODShiLtJ_P0079397 protein_coding protein_coding MGP_NODShiLtJ_T0079398.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134923362 134924788 - MGP_NODShiLtJ_P0079398 protein_coding protein_coding MGP_NODShiLtJ_T0079399.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134935989 134978656 - protein_coding processed_transcript MGP_NODShiLtJ_T0079400.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134936000 134954659 - protein_coding processed_transcript MGP_NODShiLtJ_T0079401.1 MGP_NODShiLtJ_G0031003.1 mouse_genomes_project 6 134937182 134946238 - protein_coding retained_intron MGP_NODShiLtJ_T0080042.1 MGP_NODShiLtJ_G0031142.1 mouse_genomes_project 6 145066885 145087633 - MGP_NODShiLtJ_P0080042 protein_coding protein_coding MGP_NODShiLtJ_T0080043.1 MGP_NODShiLtJ_G0031142.1 mouse_genomes_project 6 145067554 145087615 - MGP_NODShiLtJ_P0080043 protein_coding protein_coding MGP_NODShiLtJ_T0080044.1 MGP_NODShiLtJ_G0031142.1 mouse_genomes_project 6 145068073 145087592 - MGP_NODShiLtJ_P0080044 protein_coding protein_coding MGP_NODShiLtJ_T0080045.1 MGP_NODShiLtJ_G0031142.1 mouse_genomes_project 6 145079349 145087607 - MGP_NODShiLtJ_P0080045 protein_coding protein_coding MGP_NODShiLtJ_T0002628.1 MGP_NODShiLtJ_G0002511.1 mouse_genomes_project 6 44464806 44465324 + MGP_NODShiLtJ_P0002628 Trbv12-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0008651.1 MGP_NODShiLtJ_G0006986.1 mouse_genomes_project 6 142216739 142260697 - Gm10415 lincRNA lincRNA MGP_NODShiLtJ_T0015319.1 MGP_NODShiLtJ_G0013427.1 mouse_genomes_project 6 84600147 84600648 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018137.1 MGP_NODShiLtJ_G0015507.1 mouse_genomes_project 6 94487164 94493705 + B230319C09Rik processed_transcript antisense MGP_NODShiLtJ_T0018138.1 MGP_NODShiLtJ_G0015507.1 mouse_genomes_project 6 94487219 94490761 + B230319C09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018139.1 MGP_NODShiLtJ_G0015507.1 mouse_genomes_project 6 94487221 94488050 + B230319C09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0078181.1 MGP_NODShiLtJ_G0030778.1 mouse_genomes_project 6 97706340 97715439 + MGP_NODShiLtJ_P0078181 Snrpg protein_coding protein_coding MGP_NODShiLtJ_T0078182.1 MGP_NODShiLtJ_G0030778.1 mouse_genomes_project 6 97706578 97711803 + Snrpg protein_coding retained_intron MGP_NODShiLtJ_T0078183.1 MGP_NODShiLtJ_G0030778.1 mouse_genomes_project 6 97706607 97715018 + Snrpg protein_coding processed_transcript MGP_NODShiLtJ_T0078184.1 MGP_NODShiLtJ_G0030778.1 mouse_genomes_project 6 97706640 97714969 + Snrpg protein_coding processed_transcript MGP_NODShiLtJ_T0004964.1 MGP_NODShiLtJ_G0004241.1 mouse_genomes_project 6 99349646 99355263 - Gm26636 antisense antisense MGP_NODShiLtJ_T0015285.1 MGP_NODShiLtJ_G0013393.1 mouse_genomes_project 6 74553530 74554179 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077525.1 MGP_NODShiLtJ_G0030638.1 mouse_genomes_project 6 73604047 73646862 + MGP_NODShiLtJ_P0077525 Ndnf protein_coding protein_coding MGP_NODShiLtJ_T0077526.1 MGP_NODShiLtJ_G0030638.1 mouse_genomes_project 6 73636003 73638014 + Ndnf protein_coding retained_intron MGP_NODShiLtJ_T0080519.1 MGP_NODShiLtJ_G0031281.1 mouse_genomes_project 6 161256956 161277082 + MGP_NODShiLtJ_P0080519 Cmas protein_coding protein_coding MGP_NODShiLtJ_T0080520.1 MGP_NODShiLtJ_G0031281.1 mouse_genomes_project 6 161257024 161270856 + MGP_NODShiLtJ_P0080520 Cmas protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080521.1 MGP_NODShiLtJ_G0031281.1 mouse_genomes_project 6 161257034 161276029 + MGP_NODShiLtJ_P0080521 Cmas protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080522.1 MGP_NODShiLtJ_G0031281.1 mouse_genomes_project 6 161257045 161273591 + MGP_NODShiLtJ_P0080522 Cmas protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080523.1 MGP_NODShiLtJ_G0031281.1 mouse_genomes_project 6 161270264 161272682 + Cmas protein_coding retained_intron MGP_NODShiLtJ_T0077713.1 MGP_NODShiLtJ_G0030683.1 mouse_genomes_project 6 81288071 81295251 - MGP_NODShiLtJ_P0077713 Vamp8 protein_coding protein_coding MGP_NODShiLtJ_T0077714.1 MGP_NODShiLtJ_G0030683.1 mouse_genomes_project 6 81288076 81294459 - MGP_NODShiLtJ_P0077714 Vamp8 protein_coding protein_coding MGP_NODShiLtJ_T0076328.1 MGP_NODShiLtJ_G0030338.1 mouse_genomes_project 6 31907858 31910354 + Smo protein_coding retained_intron MGP_NODShiLtJ_T0076329.1 MGP_NODShiLtJ_G0030338.1 mouse_genomes_project 6 31908044 31939053 + MGP_NODShiLtJ_P0076329 Smo protein_coding protein_coding MGP_NODShiLtJ_T0015364.1 MGP_NODShiLtJ_G0013472.1 mouse_genomes_project 6 103952678 103953154 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079009.1 MGP_NODShiLtJ_G0030939.1 mouse_genomes_project 6 128098181 128110375 + MGP_NODShiLtJ_P0079009 Brk1 protein_coding protein_coding MGP_NODShiLtJ_T0078682.1 MGP_NODShiLtJ_G0030880.1 mouse_genomes_project 6 109275247 109303501 - MGP_NODShiLtJ_P0078682 Tmf1 protein_coding protein_coding MGP_NODShiLtJ_T0078683.1 MGP_NODShiLtJ_G0030880.1 mouse_genomes_project 6 109277655 109303416 - MGP_NODShiLtJ_P0078683 Tmf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078684.1 MGP_NODShiLtJ_G0030880.1 mouse_genomes_project 6 109282622 109292124 - Tmf1 protein_coding processed_transcript MGP_NODShiLtJ_T0000185.1 MGP_NODShiLtJ_G0000134.1 mouse_genomes_project 6 77325064 77325829 - MGP_NODShiLtJ_P0000185 Igkv1-88 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0078191.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740619 97770727 + MGP_NODShiLtJ_P0078191 Tia1 protein_coding protein_coding MGP_NODShiLtJ_T0078192.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740619 97772931 + MGP_NODShiLtJ_P0078192 Tia1 protein_coding protein_coding MGP_NODShiLtJ_T0078193.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740635 97741569 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078194.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740682 97743507 + Tia1 protein_coding processed_transcript MGP_NODShiLtJ_T0078195.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740691 97756240 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078196.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740696 97758047 + Tia1 protein_coding processed_transcript MGP_NODShiLtJ_T0078197.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740696 97767300 + MGP_NODShiLtJ_P0078197 Tia1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078198.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740704 97770298 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078199.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740713 97771711 + MGP_NODShiLtJ_P0078199 Tia1 protein_coding protein_coding MGP_NODShiLtJ_T0078200.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740714 97770297 + MGP_NODShiLtJ_P0078200 Tia1 protein_coding protein_coding MGP_NODShiLtJ_T0078201.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740717 97767355 + MGP_NODShiLtJ_P0078201 Tia1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078202.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740723 97761989 + Tia1 protein_coding processed_transcript MGP_NODShiLtJ_T0078203.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740725 97772753 + MGP_NODShiLtJ_P0078203 Tia1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078204.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740736 97758093 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078205.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740736 97771706 + MGP_NODShiLtJ_P0078205 Tia1 protein_coding protein_coding MGP_NODShiLtJ_T0078206.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740760 97758128 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078207.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97740873 97764832 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078208.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97752075 97760245 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078209.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97754039 97756703 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078210.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97757457 97761741 + Tia1 protein_coding processed_transcript MGP_NODShiLtJ_T0078211.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97757649 97765056 + Tia1 protein_coding processed_transcript MGP_NODShiLtJ_T0078212.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97758149 97761975 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078213.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97758181 97763969 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078214.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97758507 97767317 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078215.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97760233 97764180 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078216.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97761954 97764540 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078217.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97764546 97765246 + Tia1 protein_coding retained_intron MGP_NODShiLtJ_T0078218.1 MGP_NODShiLtJ_G0030780.1 mouse_genomes_project 6 97765021 97769829 + MGP_NODShiLtJ_P0078218 Tia1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078572.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103325984 103385726 + Slc6a6 protein_coding processed_transcript MGP_NODShiLtJ_T0078573.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103326008 103410695 + MGP_NODShiLtJ_P0078573 Slc6a6 protein_coding protein_coding MGP_NODShiLtJ_T0078574.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103326010 103377481 + Slc6a6 protein_coding retained_intron MGP_NODShiLtJ_T0078575.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103326035 103375492 + MGP_NODShiLtJ_P0078575 Slc6a6 protein_coding protein_coding MGP_NODShiLtJ_T0078576.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103326043 103375527 + MGP_NODShiLtJ_P0078576 Slc6a6 protein_coding protein_coding MGP_NODShiLtJ_T0078577.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103326064 103344382 + Slc6a6 protein_coding retained_intron MGP_NODShiLtJ_T0078578.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103346745 103375413 + MGP_NODShiLtJ_P0078578 Slc6a6 protein_coding protein_coding MGP_NODShiLtJ_T0078579.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103375508 103396721 + MGP_NODShiLtJ_P0078579 Slc6a6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078580.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103390194 103391641 + Slc6a6 protein_coding retained_intron MGP_NODShiLtJ_T0078581.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103400047 103401862 + Slc6a6 protein_coding retained_intron MGP_NODShiLtJ_T0078582.1 MGP_NODShiLtJ_G0030857.1 mouse_genomes_project 6 103401875 103404470 + Slc6a6 protein_coding retained_intron MGP_NODShiLtJ_T0010638.1 MGP_NODShiLtJ_G0008771.1 mouse_genomes_project 6 514990 515075 - Mir653 miRNA miRNA MGP_NODShiLtJ_T0010682.1 MGP_NODShiLtJ_G0008815.1 mouse_genomes_project 6 106756634 106756702 + Gm23364 miRNA miRNA MGP_NODShiLtJ_T0004971.1 MGP_NODShiLtJ_G0004245.1 mouse_genomes_project 6 99980100 99980773 + Gm44170 antisense antisense MGP_NODShiLtJ_T0076352.1 MGP_NODShiLtJ_G0030340.1 mouse_genomes_project 6 32108064 32151620 + MGP_NODShiLtJ_P0076352 Strip2 protein_coding protein_coding MGP_NODShiLtJ_T0076353.1 MGP_NODShiLtJ_G0030340.1 mouse_genomes_project 6 32108065 32136687 + Strip2 protein_coding retained_intron MGP_NODShiLtJ_T0076354.1 MGP_NODShiLtJ_G0030340.1 mouse_genomes_project 6 32108065 32149717 + Strip2 protein_coding retained_intron MGP_NODShiLtJ_T0076355.1 MGP_NODShiLtJ_G0030340.1 mouse_genomes_project 6 32108065 32151626 + MGP_NODShiLtJ_P0076355 Strip2 protein_coding protein_coding MGP_NODShiLtJ_T0076356.1 MGP_NODShiLtJ_G0030340.1 mouse_genomes_project 6 32108065 32138209 + MGP_NODShiLtJ_P0076356 Strip2 protein_coding protein_coding MGP_NODShiLtJ_T0010651.1 MGP_NODShiLtJ_G0008784.1 mouse_genomes_project 6 32383634 32383740 - Mir96 miRNA miRNA MGP_NODShiLtJ_T0077614.1 MGP_NODShiLtJ_G0030667.1 mouse_genomes_project 6 80310260 80329498 + MGP_NODShiLtJ_P0077614 Rnf103 protein_coding protein_coding MGP_NODShiLtJ_T0077615.1 MGP_NODShiLtJ_G0030667.1 mouse_genomes_project 6 80319486 80325353 + Rnf103 protein_coding retained_intron MGP_NODShiLtJ_T0077008.1 MGP_NODShiLtJ_G0030498.1 mouse_genomes_project 6 53341305 53401740 + MGP_NODShiLtJ_P0077008 Sspo protein_coding protein_coding MGP_NODShiLtJ_T0077009.1 MGP_NODShiLtJ_G0030498.1 mouse_genomes_project 6 53341350 53401725 + MGP_NODShiLtJ_P0077009 Sspo protein_coding protein_coding MGP_NODShiLtJ_T0077010.1 MGP_NODShiLtJ_G0030498.1 mouse_genomes_project 6 53379895 53386781 + Sspo protein_coding retained_intron MGP_NODShiLtJ_T0077011.1 MGP_NODShiLtJ_G0030498.1 mouse_genomes_project 6 53387349 53401740 + MGP_NODShiLtJ_P0077011 Sspo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077012.1 MGP_NODShiLtJ_G0030498.1 mouse_genomes_project 6 53394275 53396702 + MGP_NODShiLtJ_P0077012 Sspo protein_coding protein_coding MGP_NODShiLtJ_T0077202.1 MGP_NODShiLtJ_G0030544.1 mouse_genomes_project 6 57368108 57419605 - MGP_NODShiLtJ_P0077202 Gm28308 protein_coding protein_coding MGP_NODShiLtJ_T0002079.1 MGP_NODShiLtJ_G0001991.1 mouse_genomes_project 6 128218550 128219245 + TEC TEC MGP_NODShiLtJ_T0015428.1 MGP_NODShiLtJ_G0013536.1 mouse_genomes_project 6 129711152 129711987 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077366.1 MGP_NODShiLtJ_G0030583.1 mouse_genomes_project 6 62233710 62237906 - MGP_NODShiLtJ_P0077366 Lsm5 protein_coding protein_coding MGP_NODShiLtJ_T0077367.1 MGP_NODShiLtJ_G0030583.1 mouse_genomes_project 6 62233712 62237873 - Lsm5 protein_coding retained_intron MGP_NODShiLtJ_T0077368.1 MGP_NODShiLtJ_G0030583.1 mouse_genomes_project 6 62233770 62237852 - MGP_NODShiLtJ_P0077368 Lsm5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077369.1 MGP_NODShiLtJ_G0030583.1 mouse_genomes_project 6 62233904 62237864 - MGP_NODShiLtJ_P0077369 Lsm5 protein_coding protein_coding MGP_NODShiLtJ_T0002639.1 MGP_NODShiLtJ_G0002521.1 mouse_genomes_project 6 44553310 44554015 + MGP_NODShiLtJ_P0002639 Trbv20 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0078632.1 MGP_NODShiLtJ_G0030869.1 mouse_genomes_project 6 104598987 104614077 + MGP_NODShiLtJ_P0078632 Gm15737 protein_coding protein_coding MGP_NODShiLtJ_T0079402.1 MGP_NODShiLtJ_G0031004.1 mouse_genomes_project 6 135123501 135235625 + MGP_NODShiLtJ_P0079402 Ninj2 protein_coding protein_coding MGP_NODShiLtJ_T0079403.1 MGP_NODShiLtJ_G0031004.1 mouse_genomes_project 6 135229176 135235620 + MGP_NODShiLtJ_P0079403 Ninj2 protein_coding protein_coding MGP_NODShiLtJ_T0076566.1 MGP_NODShiLtJ_G0030373.1 mouse_genomes_project 6 37442083 37473579 - MGP_NODShiLtJ_P0076566 Wdr91 protein_coding protein_coding MGP_NODShiLtJ_T0076567.1 MGP_NODShiLtJ_G0030373.1 mouse_genomes_project 6 37442083 37473579 - MGP_NODShiLtJ_P0076567 Wdr91 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076568.1 MGP_NODShiLtJ_G0030373.1 mouse_genomes_project 6 37467369 37473298 - MGP_NODShiLtJ_P0076568 Wdr91 protein_coding protein_coding MGP_NODShiLtJ_T0076569.1 MGP_NODShiLtJ_G0030373.1 mouse_genomes_project 6 37469365 37473365 - MGP_NODShiLtJ_P0076569 Wdr91 protein_coding protein_coding MGP_NODShiLtJ_T0076570.1 MGP_NODShiLtJ_G0030373.1 mouse_genomes_project 6 37470997 37473266 - MGP_NODShiLtJ_P0076570 Wdr91 protein_coding protein_coding MGP_NODShiLtJ_T0076571.1 MGP_NODShiLtJ_G0030373.1 mouse_genomes_project 6 37471249 37473536 - Wdr91 protein_coding retained_intron MGP_NODShiLtJ_T0076572.1 MGP_NODShiLtJ_G0030373.1 mouse_genomes_project 6 37472149 37473539 - Wdr91 protein_coding processed_transcript MGP_NODShiLtJ_T0076573.1 MGP_NODShiLtJ_G0030373.1 mouse_genomes_project 6 37472163 37473545 - Wdr91 protein_coding processed_transcript MGP_NODShiLtJ_T0076895.1 MGP_NODShiLtJ_G0030468.1 mouse_genomes_project 6 46374529 46378605 + MGP_NODShiLtJ_P0076895 Olfr452 protein_coding protein_coding MGP_NODShiLtJ_T0015229.1 MGP_NODShiLtJ_G0013337.1 mouse_genomes_project 6 56067523 56067761 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100699.1 MGP_NODShiLtJ_G0039093.1 mouse_genomes_project 6 118587783 118587922 + Gm23339 snoRNA snoRNA MGP_NODShiLtJ_T0078528.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102612293 102721146 - MGP_NODShiLtJ_P0078528 Nup210 protein_coding protein_coding MGP_NODShiLtJ_T0078529.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102612295 102721136 - MGP_NODShiLtJ_P0078529 Nup210 protein_coding protein_coding MGP_NODShiLtJ_T0078530.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102612295 102656914 - MGP_NODShiLtJ_P0078530 Nup210 protein_coding protein_coding MGP_NODShiLtJ_T0078531.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102612542 102617638 - Nup210 protein_coding processed_transcript MGP_NODShiLtJ_T0078532.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102618953 102625388 - Nup210 protein_coding retained_intron MGP_NODShiLtJ_T0078533.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102619132 102623931 - Nup210 protein_coding processed_transcript MGP_NODShiLtJ_T0078534.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102626458 102630137 - Nup210 protein_coding retained_intron MGP_NODShiLtJ_T0078535.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102654120 102655156 - Nup210 protein_coding processed_transcript MGP_NODShiLtJ_T0078536.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102662274 102666999 - Nup210 protein_coding processed_transcript MGP_NODShiLtJ_T0078537.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102688712 102701731 - Nup210 protein_coding retained_intron MGP_NODShiLtJ_T0078538.1 MGP_NODShiLtJ_G0030849.1 mouse_genomes_project 6 102718672 102721113 - Nup210 protein_coding retained_intron MGP_NODShiLtJ_T0076208.1 MGP_NODShiLtJ_G0030314.1 mouse_genomes_project 6 30263011 30296748 - MGP_NODShiLtJ_P0076208 Zfp800 protein_coding protein_coding MGP_NODShiLtJ_T0001936.1 MGP_NODShiLtJ_G0001848.1 mouse_genomes_project 6 51115855 51118330 + TEC TEC MGP_NODShiLtJ_T0015158.1 MGP_NODShiLtJ_G0013266.1 mouse_genomes_project 6 23442347 23443533 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002112.1 MGP_NODShiLtJ_G0002024.1 mouse_genomes_project 6 151477251 151480121 + TEC TEC MGP_NODShiLtJ_T0008505.1 MGP_NODShiLtJ_G0006868.1 mouse_genomes_project 6 53259698 53283638 - Gm44696 lincRNA lincRNA MGP_NODShiLtJ_T0100727.1 MGP_NODShiLtJ_G0039121.1 mouse_genomes_project 6 167894011 167894133 + Gm25539 snoRNA snoRNA MGP_NODShiLtJ_T0079610.1 MGP_NODShiLtJ_G0031056.1 mouse_genomes_project 6 140046657 140057210 - MGP_NODShiLtJ_P0079610 1700013D24Rik protein_coding protein_coding MGP_NODShiLtJ_T0079611.1 MGP_NODShiLtJ_G0031056.1 mouse_genomes_project 6 140046662 140057193 - 1700013D24Rik protein_coding lincRNA MGP_NODShiLtJ_T0080620.1 MGP_NODShiLtJ_G0031295.1 mouse_genomes_project 6 164600022 164607329 - MGP_NODShiLtJ_P0080620 Bhlhe41 protein_coding protein_coding MGP_NODShiLtJ_T0080621.1 MGP_NODShiLtJ_G0031295.1 mouse_genomes_project 6 164605247 164607073 - MGP_NODShiLtJ_P0080621 Bhlhe41 protein_coding protein_coding MGP_NODShiLtJ_T0080622.1 MGP_NODShiLtJ_G0031295.1 mouse_genomes_project 6 164606431 164607123 - Bhlhe41 protein_coding retained_intron MGP_NODShiLtJ_T0002114.1 MGP_NODShiLtJ_G0002026.1 mouse_genomes_project 6 152046894 152047584 + TEC TEC MGP_NODShiLtJ_T0015542.1 MGP_NODShiLtJ_G0013650.1 mouse_genomes_project 6 167810211 167810382 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002055.1 MGP_NODShiLtJ_G0001967.1 mouse_genomes_project 6 112642584 112643711 - TEC TEC MGP_NODShiLtJ_T0008645.1 MGP_NODShiLtJ_G0006980.1 mouse_genomes_project 6 135626781 135634782 + 1700072O05Rik lincRNA lincRNA MGP_NODShiLtJ_T0100721.1 MGP_NODShiLtJ_G0039115.1 mouse_genomes_project 6 153100680 153100795 + Gm25136 snoRNA snoRNA MGP_NODShiLtJ_T0015369.1 MGP_NODShiLtJ_G0013477.1 mouse_genomes_project 6 106232443 106232834 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078015.1 MGP_NODShiLtJ_G0030747.1 mouse_genomes_project 6 94826558 94832241 + MGP_NODShiLtJ_P0078015 Ankrd53 protein_coding protein_coding MGP_NODShiLtJ_T0078016.1 MGP_NODShiLtJ_G0030747.1 mouse_genomes_project 6 94826600 94831952 + MGP_NODShiLtJ_P0078016 Ankrd53 protein_coding protein_coding MGP_NODShiLtJ_T0100684.1 MGP_NODShiLtJ_G0039078.1 mouse_genomes_project 6 79595388 79595524 + Gm23346 snoRNA snoRNA MGP_NODShiLtJ_T0015448.1 MGP_NODShiLtJ_G0013556.1 mouse_genomes_project 6 136867328 136867735 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004974.1 MGP_NODShiLtJ_G0004247.1 mouse_genomes_project 6 100323165 100327578 + Gm15612 antisense antisense MGP_NODShiLtJ_T0078470.1 MGP_NODShiLtJ_G0030828.1 mouse_genomes_project 6 101266836 101425113 + MGP_NODShiLtJ_P0078470 Vmn1r41 protein_coding protein_coding MGP_NODShiLtJ_T0002521.1 MGP_NODShiLtJ_G0002422.1 mouse_genomes_project 6 45004616 45004665 + MGP_NODShiLtJ_P0002521 Trbj2-3 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0015234.1 MGP_NODShiLtJ_G0013342.1 mouse_genomes_project 6 57575747 57576028 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001920.1 MGP_NODShiLtJ_G0001832.1 mouse_genomes_project 6 49398353 49402033 + TEC TEC MGP_NODShiLtJ_T0079282.1 MGP_NODShiLtJ_G0030989.1 mouse_genomes_project 6 132997154 133046058 - MGP_NODShiLtJ_P0079282 Ret protein_coding protein_coding MGP_NODShiLtJ_T0079283.1 MGP_NODShiLtJ_G0030989.1 mouse_genomes_project 6 132999975 133046643 - MGP_NODShiLtJ_P0079283 Ret protein_coding protein_coding MGP_NODShiLtJ_T0000169.1 MGP_NODShiLtJ_G0000123.1 mouse_genomes_project 6 76815642 76816143 + MGP_NODShiLtJ_P0000169 Igkv16-104 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0015366.1 MGP_NODShiLtJ_G0013474.1 mouse_genomes_project 6 104890717 104891704 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008599.1 MGP_NODShiLtJ_G0006942.1 mouse_genomes_project 6 102056199 102088658 + lincRNA lincRNA MGP_NODShiLtJ_T0076817.1 MGP_NODShiLtJ_G0030441.1 mouse_genomes_project 6 45259819 45263817 - MGP_NODShiLtJ_P0076817 Olfr459 protein_coding protein_coding MGP_NODShiLtJ_T0076818.1 MGP_NODShiLtJ_G0030441.1 mouse_genomes_project 6 45259819 45260928 - MGP_NODShiLtJ_P0076818 Olfr459 protein_coding protein_coding MGP_NODShiLtJ_T0015500.1 MGP_NODShiLtJ_G0013608.1 mouse_genomes_project 6 149435853 149436325 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076716.1 MGP_NODShiLtJ_G0030404.1 mouse_genomes_project 6 42544473 42554256 + MGP_NODShiLtJ_P0076716 Rab19 protein_coding protein_coding MGP_NODShiLtJ_T0015405.1 MGP_NODShiLtJ_G0013513.1 mouse_genomes_project 6 122705843 122725753 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076132.1 MGP_NODShiLtJ_G0030292.1 mouse_genomes_project 6 22914412 22965731 - MGP_NODShiLtJ_P0076132 Fam3c protein_coding protein_coding MGP_NODShiLtJ_T0076133.1 MGP_NODShiLtJ_G0030292.1 mouse_genomes_project 6 22915777 22965653 - MGP_NODShiLtJ_P0076133 Fam3c protein_coding protein_coding MGP_NODShiLtJ_T0076134.1 MGP_NODShiLtJ_G0030292.1 mouse_genomes_project 6 22916355 22938254 - Fam3c protein_coding processed_transcript MGP_NODShiLtJ_T0076135.1 MGP_NODShiLtJ_G0030292.1 mouse_genomes_project 6 22917222 22965628 - MGP_NODShiLtJ_P0076135 Fam3c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076136.1 MGP_NODShiLtJ_G0030292.1 mouse_genomes_project 6 22931087 22953400 - MGP_NODShiLtJ_P0076136 Fam3c protein_coding protein_coding MGP_NODShiLtJ_T0102044.1 MGP_NODShiLtJ_G0040211.1 mouse_genomes_project 6 149923063 149923964 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015321.1 MGP_NODShiLtJ_G0013429.1 mouse_genomes_project 6 84828152 84829122 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078693.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109424358 109428585 - Frmd4b protein_coding retained_intron MGP_NODShiLtJ_T0078694.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109424408 109450774 - Frmd4b protein_coding processed_transcript MGP_NODShiLtJ_T0078695.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109424414 109611767 - MGP_NODShiLtJ_P0078695 Frmd4b protein_coding protein_coding MGP_NODShiLtJ_T0078696.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109425686 109642086 - MGP_NODShiLtJ_P0078696 Frmd4b protein_coding protein_coding MGP_NODShiLtJ_T0078697.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109444493 109450824 - Frmd4b protein_coding retained_intron MGP_NODShiLtJ_T0078698.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109445427 109463506 - Frmd4b protein_coding processed_transcript MGP_NODShiLtJ_T0078699.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109447143 109497464 - Frmd4b protein_coding retained_intron MGP_NODShiLtJ_T0078700.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109463023 109539797 - Frmd4b protein_coding processed_transcript MGP_NODShiLtJ_T0078701.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109463681 109642135 - Frmd4b protein_coding processed_transcript MGP_NODShiLtJ_T0078702.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109494219 109778247 - Frmd4b protein_coding retained_intron MGP_NODShiLtJ_T0078703.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109538847 109539765 - Frmd4b protein_coding retained_intron MGP_NODShiLtJ_T0078704.1 MGP_NODShiLtJ_G0030884.1 mouse_genomes_project 6 109539315 109578474 - MGP_NODShiLtJ_P0078704 Frmd4b protein_coding protein_coding MGP_NODShiLtJ_T0011558.1 MGP_NODShiLtJ_G0009691.1 mouse_genomes_project 6 130358791 130359041 - Gm27853 misc_RNA misc_RNA MGP_NODShiLtJ_T0100707.1 MGP_NODShiLtJ_G0039101.1 mouse_genomes_project 6 139045989 139046121 - Gm22722 snoRNA snoRNA MGP_NODShiLtJ_T0001885.1 MGP_NODShiLtJ_G0001797.1 mouse_genomes_project 6 17165281 17166660 - TEC TEC MGP_NODShiLtJ_T0075817.1 MGP_NODShiLtJ_G0030234.1 mouse_genomes_project 6 924122 934545 - MGP_NODShiLtJ_P0075817 Bet1 protein_coding protein_coding MGP_NODShiLtJ_T0075818.1 MGP_NODShiLtJ_G0030234.1 mouse_genomes_project 6 924877 934492 - Bet1 protein_coding processed_transcript MGP_NODShiLtJ_T0075819.1 MGP_NODShiLtJ_G0030234.1 mouse_genomes_project 6 925031 927980 - Bet1 protein_coding retained_intron MGP_NODShiLtJ_T0075820.1 MGP_NODShiLtJ_G0030234.1 mouse_genomes_project 6 928206 934545 - Bet1 protein_coding retained_intron MGP_NODShiLtJ_T0075821.1 MGP_NODShiLtJ_G0030234.1 mouse_genomes_project 6 929072 934503 - Bet1 protein_coding processed_transcript MGP_NODShiLtJ_T0075822.1 MGP_NODShiLtJ_G0030234.1 mouse_genomes_project 6 929095 934503 - Bet1 protein_coding processed_transcript MGP_NODShiLtJ_T0078097.1 MGP_NODShiLtJ_G0030759.1 mouse_genomes_project 6 96560443 96605928 - MGP_NODShiLtJ_P0078097 protein_coding protein_coding MGP_NODShiLtJ_T0078098.1 MGP_NODShiLtJ_G0030759.1 mouse_genomes_project 6 96560448 96605998 - MGP_NODShiLtJ_P0078098 protein_coding protein_coding MGP_NODShiLtJ_T0078099.1 MGP_NODShiLtJ_G0030759.1 mouse_genomes_project 6 96563109 96567119 - protein_coding processed_transcript MGP_NODShiLtJ_T0010707.1 MGP_NODShiLtJ_G0008840.1 mouse_genomes_project 6 143834597 143834657 - Mir7233 miRNA miRNA MGP_NODShiLtJ_T0080476.1 MGP_NODShiLtJ_G0031271.1 mouse_genomes_project 6 160688713 160734350 - MGP_NODShiLtJ_P0080476 Slco1a5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080477.1 MGP_NODShiLtJ_G0031271.1 mouse_genomes_project 6 160688713 160787172 - MGP_NODShiLtJ_P0080477 Slco1a5 protein_coding protein_coding MGP_NODShiLtJ_T0080478.1 MGP_NODShiLtJ_G0031271.1 mouse_genomes_project 6 160688713 160737588 - MGP_NODShiLtJ_P0080478 Slco1a5 protein_coding protein_coding MGP_NODShiLtJ_T0080479.1 MGP_NODShiLtJ_G0031271.1 mouse_genomes_project 6 160703222 160737588 - Slco1a5 protein_coding retained_intron MGP_NODShiLtJ_T0080480.1 MGP_NODShiLtJ_G0031271.1 mouse_genomes_project 6 160713969 160787139 - MGP_NODShiLtJ_P0080480 Slco1a5 protein_coding protein_coding MGP_NODShiLtJ_T0001988.1 MGP_NODShiLtJ_G0001900.1 mouse_genomes_project 6 90921920 90925472 + TEC TEC MGP_NODShiLtJ_T0078604.1 MGP_NODShiLtJ_G0030862.1 mouse_genomes_project 6 103755757 103840081 + MGP_NODShiLtJ_P0078604 Nr2c2 protein_coding protein_coding MGP_NODShiLtJ_T0078605.1 MGP_NODShiLtJ_G0030862.1 mouse_genomes_project 6 103756800 103834873 + MGP_NODShiLtJ_P0078605 Nr2c2 protein_coding protein_coding MGP_NODShiLtJ_T0078606.1 MGP_NODShiLtJ_G0030862.1 mouse_genomes_project 6 103803970 103805813 + MGP_NODShiLtJ_P0078606 Nr2c2 protein_coding protein_coding MGP_NODShiLtJ_T0078607.1 MGP_NODShiLtJ_G0030862.1 mouse_genomes_project 6 103804569 103808200 + Nr2c2 protein_coding retained_intron MGP_NODShiLtJ_T0078608.1 MGP_NODShiLtJ_G0030862.1 mouse_genomes_project 6 103805776 103835835 + MGP_NODShiLtJ_P0078608 Nr2c2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078609.1 MGP_NODShiLtJ_G0030862.1 mouse_genomes_project 6 103809757 103821871 + Nr2c2 protein_coding processed_transcript MGP_NODShiLtJ_T0078610.1 MGP_NODShiLtJ_G0030862.1 mouse_genomes_project 6 103822229 103824076 + Nr2c2 protein_coding retained_intron MGP_NODShiLtJ_T0078611.1 MGP_NODShiLtJ_G0030862.1 mouse_genomes_project 6 103829435 103842277 + Nr2c2 protein_coding processed_transcript MGP_NODShiLtJ_T0001992.1 MGP_NODShiLtJ_G0001904.1 mouse_genomes_project 6 91227461 91230160 + TEC TEC MGP_NODShiLtJ_T0077216.1 MGP_NODShiLtJ_G0030551.1 mouse_genomes_project 6 57429372 57433641 - MGP_NODShiLtJ_P0077216 Hoxa9 protein_coding protein_coding MGP_NODShiLtJ_T0077217.1 MGP_NODShiLtJ_G0030551.1 mouse_genomes_project 6 57430234 57437375 - Hoxa9 protein_coding processed_transcript MGP_NODShiLtJ_T0077218.1 MGP_NODShiLtJ_G0030551.1 mouse_genomes_project 6 57430391 57432459 - MGP_NODShiLtJ_P0077218 Hoxa9 protein_coding protein_coding MGP_NODShiLtJ_T0077219.1 MGP_NODShiLtJ_G0030551.1 mouse_genomes_project 6 57430593 57436570 - Hoxa9 protein_coding processed_transcript MGP_NODShiLtJ_T0077220.1 MGP_NODShiLtJ_G0030551.1 mouse_genomes_project 6 57434537 57436819 - Hoxa9 protein_coding retained_intron MGP_NODShiLtJ_T0098071.1 MGP_NODShiLtJ_G0036483.1 mouse_genomes_project 6 158373061 158373172 - Gm24174 rRNA rRNA MGP_NODShiLtJ_T0078764.1 MGP_NODShiLtJ_G0030895.1 mouse_genomes_project 6 113285133 113301824 + protein_coding retained_intron MGP_NODShiLtJ_T0079867.1 MGP_NODShiLtJ_G0031102.1 mouse_genomes_project 6 141149031 141159674 + MGP_NODShiLtJ_P0079867 Scnn1a protein_coding protein_coding MGP_NODShiLtJ_T0079868.1 MGP_NODShiLtJ_G0031102.1 mouse_genomes_project 6 141149105 141173073 + MGP_NODShiLtJ_P0079868 Scnn1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079869.1 MGP_NODShiLtJ_G0031102.1 mouse_genomes_project 6 141149347 141173296 + MGP_NODShiLtJ_P0079869 Scnn1a protein_coding protein_coding MGP_NODShiLtJ_T0079870.1 MGP_NODShiLtJ_G0031102.1 mouse_genomes_project 6 141149707 141173633 + MGP_NODShiLtJ_P0079870 Scnn1a protein_coding protein_coding MGP_NODShiLtJ_T0079298.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133450943 134075732 - MGP_NODShiLtJ_P0079298 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079299.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133456585 133459708 - Cacna1c protein_coding processed_transcript MGP_NODShiLtJ_T0079300.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133456600 133624965 - Cacna1c protein_coding processed_transcript MGP_NODShiLtJ_T0079301.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133456745 133987056 - MGP_NODShiLtJ_P0079301 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079302.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133457224 133987056 - MGP_NODShiLtJ_P0079302 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079303.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133457224 133987103 - MGP_NODShiLtJ_P0079303 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079304.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133457364 134075919 - MGP_NODShiLtJ_P0079304 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079305.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133457928 133987477 - MGP_NODShiLtJ_P0079305 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079306.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133457928 134075888 - MGP_NODShiLtJ_P0079306 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079307.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458075 133986842 - MGP_NODShiLtJ_P0079307 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079308.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458075 133986842 - MGP_NODShiLtJ_P0079308 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079309.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458075 133986842 - MGP_NODShiLtJ_P0079309 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079310.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458075 133986842 - MGP_NODShiLtJ_P0079310 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079311.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458075 133986842 - MGP_NODShiLtJ_P0079311 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079312.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458075 133986842 - MGP_NODShiLtJ_P0079312 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079313.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458081 133954166 - MGP_NODShiLtJ_P0079313 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079314.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458174 133986842 - MGP_NODShiLtJ_P0079314 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079315.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458174 134075732 - MGP_NODShiLtJ_P0079315 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079316.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133458174 133986842 - MGP_NODShiLtJ_P0079316 Cacna1c protein_coding protein_coding MGP_NODShiLtJ_T0079317.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133478333 133492630 - Cacna1c protein_coding processed_transcript MGP_NODShiLtJ_T0079318.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133568282 133573213 - Cacna1c protein_coding retained_intron MGP_NODShiLtJ_T0079319.1 MGP_NODShiLtJ_G0030994.1 mouse_genomes_project 6 133815319 134075910 - Cacna1c protein_coding processed_transcript MGP_NODShiLtJ_T0098495.1 MGP_NODShiLtJ_G0036890.1 mouse_genomes_project 6 103146808 103156786 + Gm45216 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0008576.1 MGP_NODShiLtJ_G0006925.1 mouse_genomes_project 6 97308140 97313107 + 4930553P18Rik lincRNA lincRNA MGP_NODShiLtJ_T0079959.1 MGP_NODShiLtJ_G0031123.1 mouse_genomes_project 6 143731381 143816056 - MGP_NODShiLtJ_P0079959 Prmt8 protein_coding protein_coding MGP_NODShiLtJ_T0076641.1 MGP_NODShiLtJ_G0030390.1 mouse_genomes_project 6 41126556 41151333 - D630045J12Rik protein_coding retained_intron MGP_NODShiLtJ_T0076642.1 MGP_NODShiLtJ_G0030390.1 mouse_genomes_project 6 41126562 41151276 - D630045J12Rik protein_coding retained_intron MGP_NODShiLtJ_T0076643.1 MGP_NODShiLtJ_G0030390.1 mouse_genomes_project 6 41129194 41264328 - MGP_NODShiLtJ_P0076643 D630045J12Rik protein_coding protein_coding MGP_NODShiLtJ_T0076644.1 MGP_NODShiLtJ_G0030390.1 mouse_genomes_project 6 41138305 41202834 - D630045J12Rik protein_coding retained_intron MGP_NODShiLtJ_T0076645.1 MGP_NODShiLtJ_G0030390.1 mouse_genomes_project 6 41162031 41174677 - D630045J12Rik protein_coding retained_intron MGP_NODShiLtJ_T0099419.1 MGP_NODShiLtJ_G0037813.1 mouse_genomes_project 6 31631188 31631294 - Gm26484 snRNA snRNA MGP_NODShiLtJ_T0078476.1 MGP_NODShiLtJ_G0030833.1 mouse_genomes_project 6 101489448 101497257 + MGP_NODShiLtJ_P0078476 Vmn1r46 protein_coding protein_coding MGP_NODShiLtJ_T0078477.1 MGP_NODShiLtJ_G0030833.1 mouse_genomes_project 6 101496300 101497230 + MGP_NODShiLtJ_P0078477 Vmn1r46 protein_coding protein_coding MGP_NODShiLtJ_T0015238.1 MGP_NODShiLtJ_G0013346.1 mouse_genomes_project 6 58463052 58464238 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005016.1 MGP_NODShiLtJ_G0004276.1 mouse_genomes_project 6 135582024 135582796 + Gm20692 antisense antisense MGP_NODShiLtJ_T0015111.1 MGP_NODShiLtJ_G0013219.1 mouse_genomes_project 6 1311862 1312184 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011544.1 MGP_NODShiLtJ_G0009677.1 mouse_genomes_project 6 57476251 57476422 + Gm27866 misc_RNA misc_RNA MGP_NODShiLtJ_T0077163.1 MGP_NODShiLtJ_G0030536.1 mouse_genomes_project 6 55739563 55743331 - MGP_NODShiLtJ_P0077163 Npvf protein_coding protein_coding MGP_NODShiLtJ_T0004881.1 MGP_NODShiLtJ_G0004187.1 mouse_genomes_project 6 42772826 42781514 - Gm16272 antisense antisense MGP_NODShiLtJ_T0004980.1 MGP_NODShiLtJ_G0004253.1 mouse_genomes_project 6 104671734 105037925 + antisense antisense MGP_NODShiLtJ_T0004981.1 MGP_NODShiLtJ_G0004253.1 mouse_genomes_project 6 104671774 105037835 + antisense antisense MGP_NODShiLtJ_T0004982.1 MGP_NODShiLtJ_G0004253.1 mouse_genomes_project 6 104671984 104863788 + antisense antisense MGP_NODShiLtJ_T0004983.1 MGP_NODShiLtJ_G0004253.1 mouse_genomes_project 6 104671988 104864071 + antisense antisense MGP_NODShiLtJ_T0004984.1 MGP_NODShiLtJ_G0004253.1 mouse_genomes_project 6 104671988 105037923 + antisense antisense MGP_NODShiLtJ_T0004985.1 MGP_NODShiLtJ_G0004253.1 mouse_genomes_project 6 104671988 104899352 + antisense antisense MGP_NODShiLtJ_T0102021.1 MGP_NODShiLtJ_G0040189.1 mouse_genomes_project 6 101577910 101578082 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0004872.1 MGP_NODShiLtJ_G0004180.1 mouse_genomes_project 6 37273088 37273323 - Npn2 antisense antisense MGP_NODShiLtJ_T0004873.1 MGP_NODShiLtJ_G0004180.1 mouse_genomes_project 6 37273247 37273322 - Npn2 antisense antisense MGP_NODShiLtJ_T0076325.1 MGP_NODShiLtJ_G0030337.1 mouse_genomes_project 6 31860824 31885748 + MGP_NODShiLtJ_P0076325 Tspan33 protein_coding protein_coding MGP_NODShiLtJ_T0076326.1 MGP_NODShiLtJ_G0030337.1 mouse_genomes_project 6 31860836 31885746 + MGP_NODShiLtJ_P0076326 Tspan33 protein_coding protein_coding MGP_NODShiLtJ_T0076327.1 MGP_NODShiLtJ_G0030337.1 mouse_genomes_project 6 31875120 31881934 + Tspan33 protein_coding retained_intron MGP_NODShiLtJ_T0015113.1 MGP_NODShiLtJ_G0013221.1 mouse_genomes_project 6 1810332 1810504 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080550.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162412299 162823432 - MGP_NODShiLtJ_P0080550 Sox5 protein_coding protein_coding MGP_NODShiLtJ_T0080551.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162412299 162823358 - MGP_NODShiLtJ_P0080551 Sox5 protein_coding protein_coding MGP_NODShiLtJ_T0080552.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162415237 162823426 - MGP_NODShiLtJ_P0080552 Sox5 protein_coding protein_coding MGP_NODShiLtJ_T0080553.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162416457 162538596 - MGP_NODShiLtJ_P0080553 Sox5 protein_coding protein_coding MGP_NODShiLtJ_T0080554.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162416592 162823330 - MGP_NODShiLtJ_P0080554 Sox5 protein_coding protein_coding MGP_NODShiLtJ_T0080555.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162423982 162538591 - Sox5 protein_coding processed_transcript MGP_NODShiLtJ_T0080556.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162428173 163447825 - Sox5 protein_coding retained_intron MGP_NODShiLtJ_T0080557.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162429249 162538587 - MGP_NODShiLtJ_P0080557 Sox5 protein_coding protein_coding MGP_NODShiLtJ_T0080558.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162448631 162538578 - MGP_NODShiLtJ_P0080558 Sox5 protein_coding protein_coding MGP_NODShiLtJ_T0080559.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162494893 162817244 - Sox5 protein_coding retained_intron MGP_NODShiLtJ_T0080560.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162617734 162823358 - Sox5 protein_coding retained_intron MGP_NODShiLtJ_T0080561.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162708305 163447767 - Sox5 protein_coding processed_transcript MGP_NODShiLtJ_T0080562.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162721125 162816874 - Sox5 protein_coding processed_transcript MGP_NODShiLtJ_T0080563.1 MGP_NODShiLtJ_G0031286.1 mouse_genomes_project 6 162759421 162823432 - Sox5 protein_coding retained_intron MGP_NODShiLtJ_T0015112.1 MGP_NODShiLtJ_G0013220.1 mouse_genomes_project 6 1508861 1511861 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015258.1 MGP_NODShiLtJ_G0013366.1 mouse_genomes_project 6 69364562 69366098 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015329.1 MGP_NODShiLtJ_G0013437.1 mouse_genomes_project 6 89986064 89986824 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076103.1 MGP_NODShiLtJ_G0030286.1 mouse_genomes_project 6 18462358 18494878 + MGP_NODShiLtJ_P0076103 Ankrd7 protein_coding protein_coding MGP_NODShiLtJ_T0076104.1 MGP_NODShiLtJ_G0030286.1 mouse_genomes_project 6 18462390 18494874 + MGP_NODShiLtJ_P0076104 Ankrd7 protein_coding protein_coding MGP_NODShiLtJ_T0002448.1 MGP_NODShiLtJ_G0002355.1 mouse_genomes_project 6 44992718 44992730 + MGP_NODShiLtJ_P0002448 Trbd1 TR_D_gene TR_D_gene MGP_NODShiLtJ_T0008583.1 MGP_NODShiLtJ_G0006931.1 mouse_genomes_project 6 99016426 99017866 + Gm44201 lincRNA lincRNA MGP_NODShiLtJ_T0001932.1 MGP_NODShiLtJ_G0001844.1 mouse_genomes_project 6 50627829 50630346 + TEC TEC MGP_NODShiLtJ_T0076143.1 MGP_NODShiLtJ_G0030294.1 mouse_genomes_project 6 23797466 23878129 - MGP_NODShiLtJ_P0076143 Aass protein_coding protein_coding MGP_NODShiLtJ_T0076144.1 MGP_NODShiLtJ_G0030294.1 mouse_genomes_project 6 23821627 23870934 - Aass protein_coding processed_transcript MGP_NODShiLtJ_T0076145.1 MGP_NODShiLtJ_G0030294.1 mouse_genomes_project 6 23821627 23870966 - MGP_NODShiLtJ_P0076145 Aass protein_coding protein_coding MGP_NODShiLtJ_T0076146.1 MGP_NODShiLtJ_G0030294.1 mouse_genomes_project 6 23851979 23878058 - Aass protein_coding processed_transcript MGP_NODShiLtJ_T0010684.1 MGP_NODShiLtJ_G0008817.1 mouse_genomes_project 6 111790346 111790458 - Gm22328 miRNA miRNA MGP_NODShiLtJ_T0004987.1 MGP_NODShiLtJ_G0004255.1 mouse_genomes_project 6 110319721 110454274 + Gm32592 antisense antisense MGP_NODShiLtJ_T0079700.1 MGP_NODShiLtJ_G0031074.1 mouse_genomes_project 6 140589750 140591709 + MGP_NODShiLtJ_P0079700 Spsb2 protein_coding protein_coding MGP_NODShiLtJ_T0079701.1 MGP_NODShiLtJ_G0031074.1 mouse_genomes_project 6 140589974 140591426 + MGP_NODShiLtJ_P0079701 Spsb2 protein_coding protein_coding MGP_NODShiLtJ_T0079702.1 MGP_NODShiLtJ_G0031074.1 mouse_genomes_project 6 140589995 140591709 + MGP_NODShiLtJ_P0079702 Spsb2 protein_coding protein_coding MGP_NODShiLtJ_T0079703.1 MGP_NODShiLtJ_G0031074.1 mouse_genomes_project 6 140590008 140591028 + MGP_NODShiLtJ_P0079703 Spsb2 protein_coding protein_coding MGP_NODShiLtJ_T0079704.1 MGP_NODShiLtJ_G0031074.1 mouse_genomes_project 6 140590387 140591709 + MGP_NODShiLtJ_P0079704 Spsb2 protein_coding protein_coding MGP_NODShiLtJ_T0015384.1 MGP_NODShiLtJ_G0013492.1 mouse_genomes_project 6 112169839 112170440 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080462.1 MGP_NODShiLtJ_G0031267.1 mouse_genomes_project 6 160204285 160258814 - MGP_NODShiLtJ_P0080462 Slco1a4 protein_coding protein_coding MGP_NODShiLtJ_T0080463.1 MGP_NODShiLtJ_G0031267.1 mouse_genomes_project 6 160205572 160247470 - MGP_NODShiLtJ_P0080463 Slco1a4 protein_coding protein_coding MGP_NODShiLtJ_T0080464.1 MGP_NODShiLtJ_G0031267.1 mouse_genomes_project 6 160236790 160258842 - MGP_NODShiLtJ_P0080464 Slco1a4 protein_coding protein_coding MGP_NODShiLtJ_T0080465.1 MGP_NODShiLtJ_G0031267.1 mouse_genomes_project 6 160253804 160256318 - Slco1a4 protein_coding retained_intron MGP_NODShiLtJ_T0102011.1 MGP_NODShiLtJ_G0040179.1 mouse_genomes_project 6 74841141 74842041 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015136.1 MGP_NODShiLtJ_G0013244.1 mouse_genomes_project 6 12504071 12504365 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010695.1 MGP_NODShiLtJ_G0008828.1 mouse_genomes_project 6 132760308 132760422 - Gm25535 miRNA miRNA MGP_NODShiLtJ_T0077792.1 MGP_NODShiLtJ_G0030698.1 mouse_genomes_project 6 87280726 87297526 + MGP_NODShiLtJ_P0077792 Lrrtm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077793.1 MGP_NODShiLtJ_G0030698.1 mouse_genomes_project 6 87280734 87283556 + MGP_NODShiLtJ_P0077793 Lrrtm1 protein_coding protein_coding MGP_NODShiLtJ_T0077794.1 MGP_NODShiLtJ_G0030698.1 mouse_genomes_project 6 87280755 87283550 + MGP_NODShiLtJ_P0077794 Lrrtm1 protein_coding protein_coding MGP_NODShiLtJ_T0077795.1 MGP_NODShiLtJ_G0030698.1 mouse_genomes_project 6 87280959 87282151 + MGP_NODShiLtJ_P0077795 Lrrtm1 protein_coding protein_coding MGP_NODShiLtJ_T0100689.1 MGP_NODShiLtJ_G0039083.1 mouse_genomes_project 6 94905901 94906031 - Gm23014 snoRNA snoRNA MGP_NODShiLtJ_T0080698.1 MGP_NODShiLtJ_G0031309.1 mouse_genomes_project 6 165842144 165853290 - MGP_NODShiLtJ_P0080698 Mansc4 protein_coding protein_coding MGP_NODShiLtJ_T0080699.1 MGP_NODShiLtJ_G0031309.1 mouse_genomes_project 6 165846651 165853259 - MGP_NODShiLtJ_P0080699 Mansc4 protein_coding protein_coding MGP_NODShiLtJ_T0080163.1 MGP_NODShiLtJ_G0031191.1 mouse_genomes_project 6 149632817 149635255 - A630073D07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0080164.1 MGP_NODShiLtJ_G0031191.1 mouse_genomes_project 6 149632817 149635307 - MGP_NODShiLtJ_P0080164 A630073D07Rik protein_coding protein_coding MGP_NODShiLtJ_T0080165.1 MGP_NODShiLtJ_G0031191.1 mouse_genomes_project 6 149632821 149667466 - A630073D07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0079505.1 MGP_NODShiLtJ_G0031025.1 mouse_genomes_project 6 136892598 136977175 + MGP_NODShiLtJ_P0079505 Gm7298 protein_coding protein_coding MGP_NODShiLtJ_T0078957.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127899428 127903456 - MGP_NODShiLtJ_P0078957 Rpusd3 protein_coding protein_coding MGP_NODShiLtJ_T0078958.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127899438 127903435 - MGP_NODShiLtJ_P0078958 Rpusd3 protein_coding protein_coding MGP_NODShiLtJ_T0078959.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127899657 127900562 - Rpusd3 protein_coding retained_intron MGP_NODShiLtJ_T0078960.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127900215 127903435 - MGP_NODShiLtJ_P0078960 Rpusd3 protein_coding protein_coding MGP_NODShiLtJ_T0078961.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127900419 127903426 - MGP_NODShiLtJ_P0078961 Rpusd3 protein_coding protein_coding MGP_NODShiLtJ_T0078962.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127900898 127903435 - Rpusd3 protein_coding retained_intron MGP_NODShiLtJ_T0078963.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127901003 127903430 - MGP_NODShiLtJ_P0078963 Rpusd3 protein_coding protein_coding MGP_NODShiLtJ_T0078964.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127901305 127903163 - Rpusd3 protein_coding retained_intron MGP_NODShiLtJ_T0078965.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127901332 127903447 - MGP_NODShiLtJ_P0078965 Rpusd3 protein_coding protein_coding MGP_NODShiLtJ_T0078966.1 MGP_NODShiLtJ_G0030929.1 mouse_genomes_project 6 127902413 127903439 - Rpusd3 protein_coding retained_intron MGP_NODShiLtJ_T0102027.1 MGP_NODShiLtJ_G0040195.1 mouse_genomes_project 6 139716654 139801935 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002015.1 MGP_NODShiLtJ_G0001927.1 mouse_genomes_project 6 98724974 98727082 - TEC TEC MGP_NODShiLtJ_T0001998.1 MGP_NODShiLtJ_G0001910.1 mouse_genomes_project 6 94345294 94348076 - TEC TEC MGP_NODShiLtJ_T0008700.1 MGP_NODShiLtJ_G0007020.1 mouse_genomes_project 6 165414707 165423773 + 4930479D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0010641.1 MGP_NODShiLtJ_G0008774.1 mouse_genomes_project 6 17941167 17941237 - Gm26233 miRNA miRNA MGP_NODShiLtJ_T0076177.1 MGP_NODShiLtJ_G0030305.1 mouse_genomes_project 6 25570470 25628374 - MGP_NODShiLtJ_P0076177 Wasl protein_coding protein_coding MGP_NODShiLtJ_T0076178.1 MGP_NODShiLtJ_G0030305.1 mouse_genomes_project 6 25591878 25628353 - MGP_NODShiLtJ_P0076178 Wasl protein_coding protein_coding MGP_NODShiLtJ_T0076179.1 MGP_NODShiLtJ_G0030305.1 mouse_genomes_project 6 25599680 25628303 - Wasl protein_coding processed_transcript MGP_NODShiLtJ_T0080188.1 MGP_NODShiLtJ_G0031212.1 mouse_genomes_project 6 151239414 151243304 - MGP_NODShiLtJ_P0080188 Kap protein_coding protein_coding MGP_NODShiLtJ_T0080189.1 MGP_NODShiLtJ_G0031212.1 mouse_genomes_project 6 151239517 151243215 - MGP_NODShiLtJ_P0080189 Kap protein_coding protein_coding MGP_NODShiLtJ_T0079767.1 MGP_NODShiLtJ_G0031086.1 mouse_genomes_project 6 140783368 140789786 + MGP_NODShiLtJ_P0079767 Pianp protein_coding protein_coding MGP_NODShiLtJ_T0079768.1 MGP_NODShiLtJ_G0031086.1 mouse_genomes_project 6 140783551 140789786 + MGP_NODShiLtJ_P0079768 Pianp protein_coding protein_coding MGP_NODShiLtJ_T0079769.1 MGP_NODShiLtJ_G0031086.1 mouse_genomes_project 6 140783764 140786421 + MGP_NODShiLtJ_P0079769 Pianp protein_coding protein_coding MGP_NODShiLtJ_T0079770.1 MGP_NODShiLtJ_G0031086.1 mouse_genomes_project 6 140785126 140789786 + MGP_NODShiLtJ_P0079770 Pianp protein_coding protein_coding MGP_NODShiLtJ_T0079771.1 MGP_NODShiLtJ_G0031086.1 mouse_genomes_project 6 140785299 140788833 + MGP_NODShiLtJ_P0079771 Pianp protein_coding protein_coding MGP_NODShiLtJ_T0079772.1 MGP_NODShiLtJ_G0031086.1 mouse_genomes_project 6 140785328 140786135 + MGP_NODShiLtJ_P0079772 Pianp protein_coding protein_coding MGP_NODShiLtJ_T0079773.1 MGP_NODShiLtJ_G0031086.1 mouse_genomes_project 6 140786351 140787739 + MGP_NODShiLtJ_P0079773 Pianp protein_coding protein_coding MGP_NODShiLtJ_T0079719.1 MGP_NODShiLtJ_G0031077.1 mouse_genomes_project 6 140610634 140613946 + MGP_NODShiLtJ_P0079719 Cdca3 protein_coding protein_coding MGP_NODShiLtJ_T0079720.1 MGP_NODShiLtJ_G0031077.1 mouse_genomes_project 6 140610775 140614983 + MGP_NODShiLtJ_P0079720 Cdca3 protein_coding protein_coding MGP_NODShiLtJ_T0079721.1 MGP_NODShiLtJ_G0031077.1 mouse_genomes_project 6 140611304 140613867 + MGP_NODShiLtJ_P0079721 Cdca3 protein_coding protein_coding MGP_NODShiLtJ_T0079722.1 MGP_NODShiLtJ_G0031077.1 mouse_genomes_project 6 140611322 140614814 + Cdca3 protein_coding retained_intron MGP_NODShiLtJ_T0079723.1 MGP_NODShiLtJ_G0031077.1 mouse_genomes_project 6 140611450 140613314 + Cdca3 protein_coding retained_intron MGP_NODShiLtJ_T0079724.1 MGP_NODShiLtJ_G0031077.1 mouse_genomes_project 6 140611462 140613721 + MGP_NODShiLtJ_P0079724 Cdca3 protein_coding protein_coding MGP_NODShiLtJ_T0008535.1 MGP_NODShiLtJ_G0006890.1 mouse_genomes_project 6 60572978 60589104 + Gm43995 lincRNA lincRNA MGP_NODShiLtJ_T0004976.1 MGP_NODShiLtJ_G0004249.1 mouse_genomes_project 6 102172269 102175521 - Gm15756 antisense antisense MGP_NODShiLtJ_T0001923.1 MGP_NODShiLtJ_G0001835.1 mouse_genomes_project 6 49536930 49538194 + TEC TEC MGP_NODShiLtJ_T0099417.1 MGP_NODShiLtJ_G0037811.1 mouse_genomes_project 6 27952137 27952277 - Gm24691 snRNA snRNA MGP_NODShiLtJ_T0078117.1 MGP_NODShiLtJ_G0030763.1 mouse_genomes_project 6 96696384 96713345 + MGP_NODShiLtJ_P0078117 Cct7 protein_coding protein_coding MGP_NODShiLtJ_T0078118.1 MGP_NODShiLtJ_G0030763.1 mouse_genomes_project 6 96696889 96700772 + Cct7 protein_coding retained_intron MGP_NODShiLtJ_T0078119.1 MGP_NODShiLtJ_G0030763.1 mouse_genomes_project 6 96696922 96713152 + MGP_NODShiLtJ_P0078119 Cct7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078120.1 MGP_NODShiLtJ_G0030763.1 mouse_genomes_project 6 96696962 96713152 + MGP_NODShiLtJ_P0078120 Cct7 protein_coding protein_coding MGP_NODShiLtJ_T0078121.1 MGP_NODShiLtJ_G0030763.1 mouse_genomes_project 6 96705607 96709780 + Cct7 protein_coding retained_intron MGP_NODShiLtJ_T0078122.1 MGP_NODShiLtJ_G0030763.1 mouse_genomes_project 6 96706640 96710807 + Cct7 protein_coding retained_intron MGP_NODShiLtJ_T0078123.1 MGP_NODShiLtJ_G0030763.1 mouse_genomes_project 6 96707021 96710958 + MGP_NODShiLtJ_P0078123 Cct7 protein_coding protein_coding MGP_NODShiLtJ_T0015114.1 MGP_NODShiLtJ_G0013222.1 mouse_genomes_project 6 3468713 3468946 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078287.1 MGP_NODShiLtJ_G0030794.1 mouse_genomes_project 6 98739012 98744306 - MGP_NODShiLtJ_P0078287 Gkn1 protein_coding protein_coding MGP_NODShiLtJ_T0010674.1 MGP_NODShiLtJ_G0008807.1 mouse_genomes_project 6 94440997 94441104 - Mir6374 miRNA miRNA MGP_NODShiLtJ_T0004953.1 MGP_NODShiLtJ_G0004237.1 mouse_genomes_project 6 97869625 97898151 + 1600020E01Rik antisense antisense MGP_NODShiLtJ_T0004954.1 MGP_NODShiLtJ_G0004237.1 mouse_genomes_project 6 97869625 97912405 + 1600020E01Rik antisense antisense MGP_NODShiLtJ_T0004955.1 MGP_NODShiLtJ_G0004237.1 mouse_genomes_project 6 97869651 97912405 + 1600020E01Rik antisense antisense MGP_NODShiLtJ_T0004956.1 MGP_NODShiLtJ_G0004237.1 mouse_genomes_project 6 97870190 97929961 + 1600020E01Rik antisense antisense MGP_NODShiLtJ_T0004957.1 MGP_NODShiLtJ_G0004237.1 mouse_genomes_project 6 97870699 97912405 + 1600020E01Rik antisense antisense MGP_NODShiLtJ_T0004958.1 MGP_NODShiLtJ_G0004237.1 mouse_genomes_project 6 97870781 97912404 + 1600020E01Rik antisense antisense MGP_NODShiLtJ_T0004959.1 MGP_NODShiLtJ_G0004237.1 mouse_genomes_project 6 97870854 97911467 + 1600020E01Rik antisense antisense MGP_NODShiLtJ_T0004960.1 MGP_NODShiLtJ_G0004237.1 mouse_genomes_project 6 97895101 97930391 + 1600020E01Rik antisense antisense MGP_NODShiLtJ_T0001969.1 MGP_NODShiLtJ_G0001881.1 mouse_genomes_project 6 81565601 81569026 - TEC TEC MGP_NODShiLtJ_T0002640.1 MGP_NODShiLtJ_G0002522.1 mouse_genomes_project 6 44563183 44563676 + MGP_NODShiLtJ_P0002640 Trbv21 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002641.1 MGP_NODShiLtJ_G0002522.1 mouse_genomes_project 6 44563388 44563678 + MGP_NODShiLtJ_P0002641 Trbv21 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0079049.1 MGP_NODShiLtJ_G0030947.1 mouse_genomes_project 6 128799958 128836350 + MGP_NODShiLtJ_P0079049 Slc6a1 protein_coding protein_coding MGP_NODShiLtJ_T0079050.1 MGP_NODShiLtJ_G0030947.1 mouse_genomes_project 6 128800152 128826025 + Slc6a1 protein_coding retained_intron MGP_NODShiLtJ_T0079051.1 MGP_NODShiLtJ_G0030947.1 mouse_genomes_project 6 128800152 128831351 + Slc6a1 protein_coding retained_intron MGP_NODShiLtJ_T0079052.1 MGP_NODShiLtJ_G0030947.1 mouse_genomes_project 6 128818933 128820862 + Slc6a1 protein_coding processed_transcript MGP_NODShiLtJ_T0079053.1 MGP_NODShiLtJ_G0030947.1 mouse_genomes_project 6 128820154 128820862 + Slc6a1 protein_coding retained_intron MGP_NODShiLtJ_T0079054.1 MGP_NODShiLtJ_G0030947.1 mouse_genomes_project 6 128832107 128834422 + Slc6a1 protein_coding retained_intron MGP_NODShiLtJ_T0004889.1 MGP_NODShiLtJ_G0004194.1 mouse_genomes_project 6 47191376 47197732 + 9430018G01Rik antisense antisense MGP_NODShiLtJ_T0015531.1 MGP_NODShiLtJ_G0013639.1 mouse_genomes_project 6 161665239 161665708 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078402.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100316225 100322212 - MGP_NODShiLtJ_P0078402 Abtb1 protein_coding protein_coding MGP_NODShiLtJ_T0078403.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100316235 100322206 - MGP_NODShiLtJ_P0078403 Abtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078404.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100316459 100322296 - MGP_NODShiLtJ_P0078404 Abtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078405.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100316589 100319027 - Abtb1 protein_coding retained_intron MGP_NODShiLtJ_T0078406.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100316734 100319178 - MGP_NODShiLtJ_P0078406 Abtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078407.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100316996 100319392 - MGP_NODShiLtJ_P0078407 Abtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078408.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100318426 100319467 - MGP_NODShiLtJ_P0078408 Abtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078409.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100318765 100322178 - MGP_NODShiLtJ_P0078409 Abtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078410.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100318968 100319901 - Abtb1 protein_coding retained_intron MGP_NODShiLtJ_T0078411.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100319156 100322194 - MGP_NODShiLtJ_P0078411 Abtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078412.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100319329 100322142 - Abtb1 protein_coding retained_intron MGP_NODShiLtJ_T0078413.1 MGP_NODShiLtJ_G0030819.1 mouse_genomes_project 6 100319976 100322247 - MGP_NODShiLtJ_P0078413 Abtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077542.1 MGP_NODShiLtJ_G0030645.1 mouse_genomes_project 6 74699578 74700508 - MGP_NODShiLtJ_P0077542 Vmn1r34 protein_coding protein_coding MGP_NODShiLtJ_T0015224.1 MGP_NODShiLtJ_G0013332.1 mouse_genomes_project 6 54543030 54543776 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080615.1 MGP_NODShiLtJ_G0031293.1 mouse_genomes_project 6 164334097 164342070 + MGP_NODShiLtJ_P0080615 Tuba3b protein_coding protein_coding MGP_NODShiLtJ_T0077860.1 MGP_NODShiLtJ_G0030718.1 mouse_genomes_project 6 94032740 94036125 + Loxl3 protein_coding processed_transcript MGP_NODShiLtJ_T0077861.1 MGP_NODShiLtJ_G0030718.1 mouse_genomes_project 6 94032740 94052643 + MGP_NODShiLtJ_P0077861 Loxl3 protein_coding protein_coding MGP_NODShiLtJ_T0077862.1 MGP_NODShiLtJ_G0030718.1 mouse_genomes_project 6 94032740 94052643 + MGP_NODShiLtJ_P0077862 Loxl3 protein_coding protein_coding MGP_NODShiLtJ_T0077863.1 MGP_NODShiLtJ_G0030718.1 mouse_genomes_project 6 94036983 94045007 + Loxl3 protein_coding processed_transcript MGP_NODShiLtJ_T0077864.1 MGP_NODShiLtJ_G0030718.1 mouse_genomes_project 6 94049949 94050749 + Loxl3 protein_coding retained_intron MGP_NODShiLtJ_T0077408.1 MGP_NODShiLtJ_G0030603.1 mouse_genomes_project 6 63050326 63051413 - MGP_NODShiLtJ_P0077408 Vmn1r18 protein_coding protein_coding MGP_NODShiLtJ_T0008459.1 MGP_NODShiLtJ_G0006840.1 mouse_genomes_project 6 33355231 33355635 - Gm27019 lincRNA lincRNA MGP_NODShiLtJ_T0077597.1 MGP_NODShiLtJ_G0030661.1 mouse_genomes_project 6 79969537 79974790 + MGP_NODShiLtJ_P0077597 Fabp1 protein_coding protein_coding MGP_NODShiLtJ_T0015367.1 MGP_NODShiLtJ_G0013475.1 mouse_genomes_project 6 105453239 105454113 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002066.1 MGP_NODShiLtJ_G0001978.1 mouse_genomes_project 6 116465005 116468789 + TEC TEC MGP_NODShiLtJ_T0011511.1 MGP_NODShiLtJ_G0009644.1 mouse_genomes_project 6 4054266 4054412 - Dlx6os1 misc_RNA misc_RNA MGP_NODShiLtJ_T0002031.1 MGP_NODShiLtJ_G0001943.1 mouse_genomes_project 6 100879330 100880752 + TEC TEC MGP_NODShiLtJ_T0002692.1 MGP_NODShiLtJ_G0002565.1 mouse_genomes_project 6 44587326 44587599 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0076633.1 MGP_NODShiLtJ_G0030388.1 mouse_genomes_project 6 41043426 41046503 - Atp6v0a4 protein_coding processed_transcript MGP_NODShiLtJ_T0076634.1 MGP_NODShiLtJ_G0030388.1 mouse_genomes_project 6 41043426 41109244 - MGP_NODShiLtJ_P0076634 Atp6v0a4 protein_coding protein_coding MGP_NODShiLtJ_T0076635.1 MGP_NODShiLtJ_G0030388.1 mouse_genomes_project 6 41043426 41125129 - MGP_NODShiLtJ_P0076635 Atp6v0a4 protein_coding protein_coding MGP_NODShiLtJ_T0076636.1 MGP_NODShiLtJ_G0030388.1 mouse_genomes_project 6 41046222 41052198 - Atp6v0a4 protein_coding retained_intron MGP_NODShiLtJ_T0076637.1 MGP_NODShiLtJ_G0030388.1 mouse_genomes_project 6 41077527 41081971 - Atp6v0a4 protein_coding retained_intron MGP_NODShiLtJ_T0076638.1 MGP_NODShiLtJ_G0030388.1 mouse_genomes_project 6 41087228 41095781 - Atp6v0a4 protein_coding retained_intron MGP_NODShiLtJ_T0076639.1 MGP_NODShiLtJ_G0030388.1 mouse_genomes_project 6 41092260 41125032 - Atp6v0a4 protein_coding retained_intron MGP_NODShiLtJ_T0102032.1 MGP_NODShiLtJ_G0040199.1 mouse_genomes_project 6 145335568 145336408 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0080301.1 MGP_NODShiLtJ_G0031235.1 mouse_genomes_project 6 154289515 154380999 - MGP_NODShiLtJ_P0080301 Gucy2c protein_coding protein_coding MGP_NODShiLtJ_T0080302.1 MGP_NODShiLtJ_G0031235.1 mouse_genomes_project 6 154289516 154380976 - MGP_NODShiLtJ_P0080302 Gucy2c protein_coding protein_coding MGP_NODShiLtJ_T0099451.1 MGP_NODShiLtJ_G0037845.1 mouse_genomes_project 6 127018569 127018676 - Gm23002 snRNA snRNA MGP_NODShiLtJ_T0101185.1 MGP_NODShiLtJ_G0039499.1 mouse_genomes_project 6 164087987 164102501 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101186.1 MGP_NODShiLtJ_G0039499.1 mouse_genomes_project 6 164087988 164092634 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101187.1 MGP_NODShiLtJ_G0039499.1 mouse_genomes_project 6 164090701 164092443 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101188.1 MGP_NODShiLtJ_G0039499.1 mouse_genomes_project 6 164091819 164092560 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0008712.1 MGP_NODShiLtJ_G0007028.1 mouse_genomes_project 6 167570975 167584215 + Gm44115 lincRNA lincRNA MGP_NODShiLtJ_T0011510.1 MGP_NODShiLtJ_G0009643.1 mouse_genomes_project 6 3997983 3998190 + Gm27905 misc_RNA misc_RNA MGP_NODShiLtJ_T0079128.1 MGP_NODShiLtJ_G0030960.1 mouse_genomes_project 6 130237654 130244651 - MGP_NODShiLtJ_P0079128 Taf9 protein_coding protein_coding MGP_NODShiLtJ_T0079569.1 MGP_NODShiLtJ_G0031040.1 mouse_genomes_project 6 138316908 138338884 + MGP_NODShiLtJ_P0079569 Necap1 protein_coding protein_coding MGP_NODShiLtJ_T0079570.1 MGP_NODShiLtJ_G0031040.1 mouse_genomes_project 6 138316983 138318527 + Necap1 protein_coding processed_transcript MGP_NODShiLtJ_T0079571.1 MGP_NODShiLtJ_G0031040.1 mouse_genomes_project 6 138317005 138324964 + Necap1 protein_coding retained_intron MGP_NODShiLtJ_T0079572.1 MGP_NODShiLtJ_G0031040.1 mouse_genomes_project 6 138317015 138323679 + Necap1 protein_coding retained_intron MGP_NODShiLtJ_T0001929.1 MGP_NODShiLtJ_G0001841.1 mouse_genomes_project 6 50591930 50593878 + TEC TEC MGP_NODShiLtJ_T0078743.1 MGP_NODShiLtJ_G0030888.1 mouse_genomes_project 6 111553390 111984518 - MGP_NODShiLtJ_P0078743 Gm20696 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078746.1 MGP_NODShiLtJ_G0030888.1 mouse_genomes_project 6 111738279 111748862 - Gm20696 protein_coding retained_intron MGP_NODShiLtJ_T0078747.1 MGP_NODShiLtJ_G0030888.1 mouse_genomes_project 6 111738310 111949057 - Gm20696 protein_coding retained_intron MGP_NODShiLtJ_T0008460.1 MGP_NODShiLtJ_G0006841.1 mouse_genomes_project 6 33379718 33380022 - Gm13834 lincRNA lincRNA MGP_NODShiLtJ_T0080158.1 MGP_NODShiLtJ_G0031186.1 mouse_genomes_project 6 148464405 148465369 - MGP_NODShiLtJ_P0080158 Tas2r105 protein_coding protein_coding MGP_NODShiLtJ_T0078485.1 MGP_NODShiLtJ_G0030838.1 mouse_genomes_project 6 101786881 101788003 - MGP_NODShiLtJ_P0078485 Vmn1r53 protein_coding protein_coding MGP_NODShiLtJ_T0005010.1 MGP_NODShiLtJ_G0004270.1 mouse_genomes_project 6 128440225 128442694 + Gm15082 antisense antisense MGP_NODShiLtJ_T0080176.1 MGP_NODShiLtJ_G0031202.1 mouse_genomes_project 6 149958556 149959474 + MGP_NODShiLtJ_P0080176 Tas2r116 protein_coding protein_coding MGP_NODShiLtJ_T0015132.1 MGP_NODShiLtJ_G0013240.1 mouse_genomes_project 6 10869061 10870763 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000299.1 MGP_NODShiLtJ_G0000237.1 mouse_genomes_project 6 77161175 77161886 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0015151.1 MGP_NODShiLtJ_G0013259.1 mouse_genomes_project 6 19690843 19692628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008433.1 MGP_NODShiLtJ_G0006822.1 mouse_genomes_project 6 8733309 8833010 + Gm44004 lincRNA lincRNA MGP_NODShiLtJ_T0079092.1 MGP_NODShiLtJ_G0030952.1 mouse_genomes_project 6 129683387 129843791 + Syn2 protein_coding retained_intron MGP_NODShiLtJ_T0079093.1 MGP_NODShiLtJ_G0030952.1 mouse_genomes_project 6 129683387 129845259 + MGP_NODShiLtJ_P0079093 Syn2 protein_coding protein_coding MGP_NODShiLtJ_T0079094.1 MGP_NODShiLtJ_G0030952.1 mouse_genomes_project 6 129683402 129850706 + MGP_NODShiLtJ_P0079094 Syn2 protein_coding protein_coding MGP_NODShiLtJ_T0079095.1 MGP_NODShiLtJ_G0030952.1 mouse_genomes_project 6 129683435 129845259 + MGP_NODShiLtJ_P0079095 Syn2 protein_coding protein_coding MGP_NODShiLtJ_T0079096.1 MGP_NODShiLtJ_G0030952.1 mouse_genomes_project 6 129777070 129809028 + Syn2 protein_coding processed_transcript MGP_NODShiLtJ_T0079098.1 MGP_NODShiLtJ_G0030952.1 mouse_genomes_project 6 129803907 129845259 + Syn2 protein_coding processed_transcript MGP_NODShiLtJ_T0079101.1 MGP_NODShiLtJ_G0030952.1 mouse_genomes_project 6 129820264 129847409 + Syn2 protein_coding retained_intron MGP_NODShiLtJ_T0077440.1 MGP_NODShiLtJ_G0030619.1 mouse_genomes_project 6 64074317 64075224 - MGP_NODShiLtJ_P0077440 protein_coding protein_coding MGP_NODShiLtJ_T0077500.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72939763 72954479 + MGP_NODShiLtJ_P0077500 Smarcad1 protein_coding protein_coding MGP_NODShiLtJ_T0077501.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72939789 73019578 + MGP_NODShiLtJ_P0077501 Smarcad1 protein_coding protein_coding MGP_NODShiLtJ_T0077502.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72939801 72940742 + Smarcad1 protein_coding retained_intron MGP_NODShiLtJ_T0077503.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72939847 72941312 + MGP_NODShiLtJ_P0077503 Smarcad1 protein_coding protein_coding MGP_NODShiLtJ_T0077504.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72940016 72941384 + MGP_NODShiLtJ_P0077504 Smarcad1 protein_coding protein_coding MGP_NODShiLtJ_T0077505.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72940038 72950542 + MGP_NODShiLtJ_P0077505 Smarcad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077506.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72940046 72950631 + MGP_NODShiLtJ_P0077506 Smarcad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077507.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72940059 72982011 + Smarcad1 protein_coding processed_transcript MGP_NODShiLtJ_T0077508.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72940393 73019115 + MGP_NODShiLtJ_P0077508 Smarcad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077509.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72950664 72966368 + Smarcad1 protein_coding retained_intron MGP_NODShiLtJ_T0077510.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72956544 72973711 + Smarcad1 protein_coding processed_transcript MGP_NODShiLtJ_T0077511.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72973876 72997011 + MGP_NODShiLtJ_P0077511 Smarcad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077512.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72977650 72980887 + Smarcad1 protein_coding retained_intron MGP_NODShiLtJ_T0077513.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 72999289 72999932 + Smarcad1 protein_coding retained_intron MGP_NODShiLtJ_T0077514.1 MGP_NODShiLtJ_G0030634.1 mouse_genomes_project 6 73010605 73013495 + Smarcad1 protein_coding retained_intron MGP_NODShiLtJ_T0080402.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157765355 157805266 + MGP_NODShiLtJ_P0080402 protein_coding protein_coding MGP_NODShiLtJ_T0080403.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157765371 157820077 + MGP_NODShiLtJ_P0080403 protein_coding protein_coding MGP_NODShiLtJ_T0080404.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157780702 157820184 + MGP_NODShiLtJ_P0080404 protein_coding protein_coding MGP_NODShiLtJ_T0080405.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157780705 157844660 + protein_coding processed_transcript MGP_NODShiLtJ_T0080406.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157797083 157844660 + MGP_NODShiLtJ_P0080406 protein_coding protein_coding MGP_NODShiLtJ_T0080407.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157800948 158142219 + MGP_NODShiLtJ_P0080407 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080408.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157804666 157819850 + MGP_NODShiLtJ_P0080408 protein_coding protein_coding MGP_NODShiLtJ_T0080409.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157868581 158013183 + protein_coding processed_transcript MGP_NODShiLtJ_T0080410.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157868581 158142213 + MGP_NODShiLtJ_P0080410 protein_coding protein_coding MGP_NODShiLtJ_T0080411.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 157929863 158006335 + protein_coding retained_intron MGP_NODShiLtJ_T0080412.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 158001232 158142213 + protein_coding processed_transcript MGP_NODShiLtJ_T0080413.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 158001290 158024499 + protein_coding processed_transcript MGP_NODShiLtJ_T0080414.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 158001368 158070915 + protein_coding processed_transcript MGP_NODShiLtJ_T0080416.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 158003485 158142213 + MGP_NODShiLtJ_P0080416 protein_coding protein_coding MGP_NODShiLtJ_T0080417.1 MGP_NODShiLtJ_G0031256.1 mouse_genomes_project 6 158090132 158112083 + protein_coding processed_transcript MGP_NODShiLtJ_T0015470.1 MGP_NODShiLtJ_G0013578.1 mouse_genomes_project 6 142981144 142981422 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010683.1 MGP_NODShiLtJ_G0008816.1 mouse_genomes_project 6 111361247 111361394 - miRNA miRNA MGP_NODShiLtJ_T0075900.1 MGP_NODShiLtJ_G0030250.1 mouse_genomes_project 6 4148482 4239905 + MGP_NODShiLtJ_P0075900 Sdhaf3 protein_coding protein_coding MGP_NODShiLtJ_T0075901.1 MGP_NODShiLtJ_G0030250.1 mouse_genomes_project 6 4148485 4159574 + Sdhaf3 protein_coding processed_transcript MGP_NODShiLtJ_T0080156.1 MGP_NODShiLtJ_G0031184.1 mouse_genomes_project 6 148454614 148455541 - MGP_NODShiLtJ_P0080156 Tas2r106 protein_coding protein_coding MGP_NODShiLtJ_T0077097.1 MGP_NODShiLtJ_G0030520.1 mouse_genomes_project 6 53852048 53855841 + MGP_NODShiLtJ_P0077097 1600015I10Rik protein_coding protein_coding MGP_NODShiLtJ_T0008653.1 MGP_NODShiLtJ_G0006988.1 mouse_genomes_project 6 143262059 143265069 - Gm43635 lincRNA lincRNA MGP_NODShiLtJ_T0011513.1 MGP_NODShiLtJ_G0009646.1 mouse_genomes_project 6 8659292 8659384 + Gm27894 misc_RNA misc_RNA MGP_NODShiLtJ_T0002069.1 MGP_NODShiLtJ_G0001981.1 mouse_genomes_project 6 116555109 116556653 + TEC TEC MGP_NODShiLtJ_T0076901.1 MGP_NODShiLtJ_G0030471.1 mouse_genomes_project 6 46489114 46490047 + MGP_NODShiLtJ_P0076901 Olfr448 protein_coding protein_coding MGP_NODShiLtJ_T0076796.1 MGP_NODShiLtJ_G0030431.1 mouse_genomes_project 6 44369177 44374419 - MGP_NODShiLtJ_P0076796 2210010C04Rik protein_coding protein_coding MGP_NODShiLtJ_T0002110.1 MGP_NODShiLtJ_G0002022.1 mouse_genomes_project 6 150334943 150336771 + TEC TEC MGP_NODShiLtJ_T0008438.1 MGP_NODShiLtJ_G0006825.1 mouse_genomes_project 6 11916312 11920146 + 1700016P04Rik lincRNA lincRNA MGP_NODShiLtJ_T0076026.1 MGP_NODShiLtJ_G0030275.1 mouse_genomes_project 6 16411780 16451582 + MGP_NODShiLtJ_P0076026 Tes protein_coding protein_coding MGP_NODShiLtJ_T0076027.1 MGP_NODShiLtJ_G0030275.1 mouse_genomes_project 6 16411791 16415563 + Tes protein_coding retained_intron MGP_NODShiLtJ_T0076028.1 MGP_NODShiLtJ_G0030275.1 mouse_genomes_project 6 16411799 16443147 + MGP_NODShiLtJ_P0076028 Tes protein_coding protein_coding MGP_NODShiLtJ_T0076029.1 MGP_NODShiLtJ_G0030275.1 mouse_genomes_project 6 16411823 16434608 + Tes protein_coding processed_transcript MGP_NODShiLtJ_T0076030.1 MGP_NODShiLtJ_G0030275.1 mouse_genomes_project 6 16411855 16451587 + MGP_NODShiLtJ_P0076030 Tes protein_coding protein_coding MGP_NODShiLtJ_T0080102.1 MGP_NODShiLtJ_G0031161.1 mouse_genomes_project 6 146028684 146055466 - MGP_NODShiLtJ_P0080102 Klrk1 protein_coding protein_coding MGP_NODShiLtJ_T0080103.1 MGP_NODShiLtJ_G0031161.1 mouse_genomes_project 6 146030774 146051845 - MGP_NODShiLtJ_P0080103 Klrk1 protein_coding protein_coding MGP_NODShiLtJ_T0080104.1 MGP_NODShiLtJ_G0031161.1 mouse_genomes_project 6 146030820 146055443 - MGP_NODShiLtJ_P0080104 Klrk1 protein_coding protein_coding MGP_NODShiLtJ_T0080105.1 MGP_NODShiLtJ_G0031161.1 mouse_genomes_project 6 146035528 146051687 - Klrk1 protein_coding retained_intron MGP_NODShiLtJ_T0080106.1 MGP_NODShiLtJ_G0031161.1 mouse_genomes_project 6 146035603 146051790 - Klrk1 protein_coding retained_intron MGP_NODShiLtJ_T0080107.1 MGP_NODShiLtJ_G0031161.1 mouse_genomes_project 6 146044436 146055462 - Klrk1 protein_coding retained_intron MGP_NODShiLtJ_T0076218.1 MGP_NODShiLtJ_G0030318.1 mouse_genomes_project 6 30491734 30500146 - MGP_NODShiLtJ_P0076218 Pax4 protein_coding protein_coding MGP_NODShiLtJ_T0076219.1 MGP_NODShiLtJ_G0030318.1 mouse_genomes_project 6 30491734 30500248 - MGP_NODShiLtJ_P0076219 Pax4 protein_coding protein_coding MGP_NODShiLtJ_T0076220.1 MGP_NODShiLtJ_G0030318.1 mouse_genomes_project 6 30491739 30500146 - MGP_NODShiLtJ_P0076220 Pax4 protein_coding protein_coding MGP_NODShiLtJ_T0076221.1 MGP_NODShiLtJ_G0030318.1 mouse_genomes_project 6 30491775 30498045 - MGP_NODShiLtJ_P0076221 Pax4 protein_coding protein_coding MGP_NODShiLtJ_T0076222.1 MGP_NODShiLtJ_G0030318.1 mouse_genomes_project 6 30494679 30497240 - Pax4 protein_coding retained_intron MGP_NODShiLtJ_T0076223.1 MGP_NODShiLtJ_G0030318.1 mouse_genomes_project 6 30495639 30498045 - Pax4 protein_coding retained_intron MGP_NODShiLtJ_T0079038.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128243815 128553503 - MGP_NODShiLtJ_P0079038 Atp2b2 protein_coding protein_coding MGP_NODShiLtJ_T0079039.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128243822 128343251 - MGP_NODShiLtJ_P0079039 Atp2b2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079040.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128245653 128392378 - MGP_NODShiLtJ_P0079040 Atp2b2 protein_coding protein_coding MGP_NODShiLtJ_T0079041.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128245654 128553503 - MGP_NODShiLtJ_P0079041 Atp2b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079042.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128247050 128392378 - MGP_NODShiLtJ_P0079042 Atp2b2 protein_coding protein_coding MGP_NODShiLtJ_T0079043.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128248274 128437216 - MGP_NODShiLtJ_P0079043 Atp2b2 protein_coding protein_coding MGP_NODShiLtJ_T0079044.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128304286 128392209 - Atp2b2 protein_coding retained_intron MGP_NODShiLtJ_T0079045.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128343251 128411394 - Atp2b2 protein_coding processed_transcript MGP_NODShiLtJ_T0079046.1 MGP_NODShiLtJ_G0030945.1 mouse_genomes_project 6 128343469 128555323 - Atp2b2 protein_coding processed_transcript MGP_NODShiLtJ_T0077911.1 MGP_NODShiLtJ_G0030727.1 mouse_genomes_project 6 94128914 94129814 + MGP_NODShiLtJ_P0077911 Mrpl53 protein_coding protein_coding MGP_NODShiLtJ_T0077912.1 MGP_NODShiLtJ_G0030727.1 mouse_genomes_project 6 94128994 94129814 + Mrpl53 protein_coding retained_intron MGP_NODShiLtJ_T0077199.1 MGP_NODShiLtJ_G0030542.1 mouse_genomes_project 6 57359515 57362243 - MGP_NODShiLtJ_P0077199 Hoxa1 protein_coding protein_coding MGP_NODShiLtJ_T0077200.1 MGP_NODShiLtJ_G0030542.1 mouse_genomes_project 6 57359520 57362243 - MGP_NODShiLtJ_P0077200 Hoxa1 protein_coding protein_coding MGP_NODShiLtJ_T0008687.1 MGP_NODShiLtJ_G0007011.1 mouse_genomes_project 6 161513355 161513742 + 4930434O05Rik lincRNA lincRNA MGP_NODShiLtJ_T0002118.1 MGP_NODShiLtJ_G0002030.1 mouse_genomes_project 6 154658650 154659458 + TEC TEC MGP_NODShiLtJ_T0011533.1 MGP_NODShiLtJ_G0009666.1 mouse_genomes_project 6 57366742 57366844 + Gm27868 misc_RNA misc_RNA MGP_NODShiLtJ_T0005063.1 MGP_NODShiLtJ_G0004317.1 mouse_genomes_project 6 163323326 163354564 + Sox5os3 antisense antisense MGP_NODShiLtJ_T0005064.1 MGP_NODShiLtJ_G0004317.1 mouse_genomes_project 6 163337131 163354314 + Sox5os3 antisense antisense MGP_NODShiLtJ_T0018102.1 MGP_NODShiLtJ_G0015495.1 mouse_genomes_project 6 57370412 57374210 + Hoxaas2 processed_transcript antisense MGP_NODShiLtJ_T0018103.1 MGP_NODShiLtJ_G0015495.1 mouse_genomes_project 6 57371276 57374323 + Hoxaas2 processed_transcript retained_intron MGP_NODShiLtJ_T0018104.1 MGP_NODShiLtJ_G0015495.1 mouse_genomes_project 6 57373269 57374323 + Hoxaas2 processed_transcript processed_transcript MGP_NODShiLtJ_T0004999.1 MGP_NODShiLtJ_G0004263.1 mouse_genomes_project 6 126687184 126690366 - 5031434C07Rik antisense antisense MGP_NODShiLtJ_T0005000.1 MGP_NODShiLtJ_G0004263.1 mouse_genomes_project 6 126687386 126690367 - 5031434C07Rik antisense antisense MGP_NODShiLtJ_T0015134.1 MGP_NODShiLtJ_G0013242.1 mouse_genomes_project 6 11505020 11506023 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076680.1 MGP_NODShiLtJ_G0030397.1 mouse_genomes_project 6 41729728 41746366 - MGP_NODShiLtJ_P0076680 Klrg2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0076681.1 MGP_NODShiLtJ_G0030397.1 mouse_genomes_project 6 41733307 41746533 - MGP_NODShiLtJ_P0076681 Klrg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076682.1 MGP_NODShiLtJ_G0030397.1 mouse_genomes_project 6 41734274 41746533 - MGP_NODShiLtJ_P0076682 Klrg2 protein_coding protein_coding MGP_NODShiLtJ_T0076683.1 MGP_NODShiLtJ_G0030397.1 mouse_genomes_project 6 41734875 41746542 - MGP_NODShiLtJ_P0076683 Klrg2 protein_coding protein_coding MGP_NODShiLtJ_T0002111.1 MGP_NODShiLtJ_G0002023.1 mouse_genomes_project 6 151463266 151465095 + TEC TEC MGP_NODShiLtJ_T0005042.1 MGP_NODShiLtJ_G0004298.1 mouse_genomes_project 6 145237325 145239246 - antisense antisense MGP_NODShiLtJ_T0075917.1 MGP_NODShiLtJ_G0030255.1 mouse_genomes_project 6 5499652 5531602 + MGP_NODShiLtJ_P0075917 Mios protein_coding protein_coding MGP_NODShiLtJ_T0075918.1 MGP_NODShiLtJ_G0030255.1 mouse_genomes_project 6 5521965 5531596 + Mios protein_coding retained_intron MGP_NODShiLtJ_T0075919.1 MGP_NODShiLtJ_G0030255.1 mouse_genomes_project 6 5524835 5531596 + Mios protein_coding retained_intron MGP_NODShiLtJ_T0080377.1 MGP_NODShiLtJ_G0031251.1 mouse_genomes_project 6 155800983 155861698 - MGP_NODShiLtJ_P0080377 Slc15a5 protein_coding protein_coding MGP_NODShiLtJ_T0080378.1 MGP_NODShiLtJ_G0031251.1 mouse_genomes_project 6 155800987 155893002 - Slc15a5 protein_coding retained_intron MGP_NODShiLtJ_T0080379.1 MGP_NODShiLtJ_G0031251.1 mouse_genomes_project 6 155800987 155899710 - MGP_NODShiLtJ_P0080379 Slc15a5 protein_coding protein_coding MGP_NODShiLtJ_T0080380.1 MGP_NODShiLtJ_G0031251.1 mouse_genomes_project 6 155835965 155900567 - MGP_NODShiLtJ_P0080380 Slc15a5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080381.1 MGP_NODShiLtJ_G0031251.1 mouse_genomes_project 6 155836499 155854043 - MGP_NODShiLtJ_P0080381 Slc15a5 protein_coding protein_coding MGP_NODShiLtJ_T0080382.1 MGP_NODShiLtJ_G0031251.1 mouse_genomes_project 6 155850421 155861768 - MGP_NODShiLtJ_P0080382 Slc15a5 protein_coding protein_coding MGP_NODShiLtJ_T0080383.1 MGP_NODShiLtJ_G0031251.1 mouse_genomes_project 6 155854216 155874166 - Slc15a5 protein_coding retained_intron MGP_NODShiLtJ_T0077998.1 MGP_NODShiLtJ_G0030742.1 mouse_genomes_project 6 94589273 94616857 - Stambp protein_coding retained_intron MGP_NODShiLtJ_T0077999.1 MGP_NODShiLtJ_G0030742.1 mouse_genomes_project 6 94589279 94616863 - MGP_NODShiLtJ_P0077999 Stambp protein_coding protein_coding MGP_NODShiLtJ_T0078000.1 MGP_NODShiLtJ_G0030742.1 mouse_genomes_project 6 94589286 94617152 - MGP_NODShiLtJ_P0078000 Stambp protein_coding protein_coding MGP_NODShiLtJ_T0078001.1 MGP_NODShiLtJ_G0030742.1 mouse_genomes_project 6 94589416 94595439 - Stambp protein_coding retained_intron MGP_NODShiLtJ_T0078002.1 MGP_NODShiLtJ_G0030742.1 mouse_genomes_project 6 94589821 94616847 - MGP_NODShiLtJ_P0078002 Stambp protein_coding protein_coding MGP_NODShiLtJ_T0078003.1 MGP_NODShiLtJ_G0030742.1 mouse_genomes_project 6 94594863 94595267 - Stambp protein_coding retained_intron MGP_NODShiLtJ_T0078004.1 MGP_NODShiLtJ_G0030742.1 mouse_genomes_project 6 94615562 94616869 - Stambp protein_coding retained_intron MGP_NODShiLtJ_T0102026.1 MGP_NODShiLtJ_G0040194.1 mouse_genomes_project 6 139691320 139692224 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101986.1 MGP_NODShiLtJ_G0040154.1 mouse_genomes_project 6 45958977 45959119 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0075979.1 MGP_NODShiLtJ_G0030267.1 mouse_genomes_project 6 12114613 12143469 - MGP_NODShiLtJ_P0075979 Tmem168 protein_coding protein_coding MGP_NODShiLtJ_T0075980.1 MGP_NODShiLtJ_G0030267.1 mouse_genomes_project 6 12116713 12143388 - MGP_NODShiLtJ_P0075980 Tmem168 protein_coding protein_coding MGP_NODShiLtJ_T0075981.1 MGP_NODShiLtJ_G0030267.1 mouse_genomes_project 6 12138750 12143117 - Tmem168 protein_coding processed_transcript MGP_NODShiLtJ_T0075982.1 MGP_NODShiLtJ_G0030267.1 mouse_genomes_project 6 12138766 12143374 - Tmem168 protein_coding processed_transcript MGP_NODShiLtJ_T0075983.1 MGP_NODShiLtJ_G0030267.1 mouse_genomes_project 6 12141303 12143413 - Tmem168 protein_coding processed_transcript MGP_NODShiLtJ_T0075984.1 MGP_NODShiLtJ_G0030267.1 mouse_genomes_project 6 12141967 12143388 - Tmem168 protein_coding processed_transcript MGP_NODShiLtJ_T0075985.1 MGP_NODShiLtJ_G0030267.1 mouse_genomes_project 6 12142656 12143396 - Tmem168 protein_coding processed_transcript MGP_NODShiLtJ_T0077805.1 MGP_NODShiLtJ_G0030702.1 mouse_genomes_project 6 88522137 88525129 - MGP_NODShiLtJ_P0077805 Reg3d protein_coding protein_coding MGP_NODShiLtJ_T0077806.1 MGP_NODShiLtJ_G0030702.1 mouse_genomes_project 6 88522137 88525129 - MGP_NODShiLtJ_P0077806 Reg3d protein_coding protein_coding MGP_NODShiLtJ_T0077807.1 MGP_NODShiLtJ_G0030702.1 mouse_genomes_project 6 88522187 88524777 - MGP_NODShiLtJ_P0077807 Reg3d protein_coding protein_coding MGP_NODShiLtJ_T0004863.1 MGP_NODShiLtJ_G0004172.1 mouse_genomes_project 6 32939228 32947551 + Gm13782 antisense antisense MGP_NODShiLtJ_T0015270.1 MGP_NODShiLtJ_G0013378.1 mouse_genomes_project 6 73076341 73077135 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015316.1 MGP_NODShiLtJ_G0013424.1 mouse_genomes_project 6 82285170 82285594 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004942.1 MGP_NODShiLtJ_G0004229.1 mouse_genomes_project 6 94825670 94826423 - 1700124L16Rik antisense antisense MGP_NODShiLtJ_T0004943.1 MGP_NODShiLtJ_G0004229.1 mouse_genomes_project 6 94825670 94826757 - 1700124L16Rik antisense antisense MGP_NODShiLtJ_T0004944.1 MGP_NODShiLtJ_G0004229.1 mouse_genomes_project 6 94825670 94826780 - 1700124L16Rik antisense antisense MGP_NODShiLtJ_T0010671.1 MGP_NODShiLtJ_G0008804.1 mouse_genomes_project 6 92811243 92811321 - Mir468 miRNA miRNA MGP_NODShiLtJ_T0000200.1 MGP_NODShiLtJ_G0000145.1 mouse_genomes_project 6 78621451 78622013 - MGP_NODShiLtJ_P0000200 Igkv5-37 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0011555.1 MGP_NODShiLtJ_G0009688.1 mouse_genomes_project 6 125985980 125986276 + Gm24005 misc_RNA misc_RNA MGP_NODShiLtJ_T0002131.1 MGP_NODShiLtJ_G0002043.1 mouse_genomes_project 6 163924268 163926829 - TEC TEC MGP_NODShiLtJ_T0015523.1 MGP_NODShiLtJ_G0013631.1 mouse_genomes_project 6 158248505 158249011 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001982.1 MGP_NODShiLtJ_G0001894.1 mouse_genomes_project 6 87655756 87657243 - TEC TEC MGP_NODShiLtJ_T0015505.1 MGP_NODShiLtJ_G0013613.1 mouse_genomes_project 6 150149540 150149969 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079425.1 MGP_NODShiLtJ_G0031009.1 mouse_genomes_project 6 135518318 135539866 + Il17ra protein_coding retained_intron MGP_NODShiLtJ_T0079426.1 MGP_NODShiLtJ_G0031009.1 mouse_genomes_project 6 135518318 135543688 + MGP_NODShiLtJ_P0079426 Il17ra protein_coding protein_coding MGP_NODShiLtJ_T0079427.1 MGP_NODShiLtJ_G0031009.1 mouse_genomes_project 6 135529733 135536169 + Il17ra protein_coding processed_transcript MGP_NODShiLtJ_T0005044.1 MGP_NODShiLtJ_G0004300.1 mouse_genomes_project 6 151563146 151566276 - Gm17088 antisense antisense MGP_NODShiLtJ_T0008542.1 MGP_NODShiLtJ_G0006897.1 mouse_genomes_project 6 67011487 67011909 + Gm44410 lincRNA lincRNA MGP_NODShiLtJ_T0077420.1 MGP_NODShiLtJ_G0030607.1 mouse_genomes_project 6 63385759 63392062 - MGP_NODShiLtJ_P0077420 Pyurf protein_coding protein_coding MGP_NODShiLtJ_T0015353.1 MGP_NODShiLtJ_G0013461.1 mouse_genomes_project 6 97223913 97224913 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079557.1 MGP_NODShiLtJ_G0031037.1 mouse_genomes_project 6 138145765 138164498 - MGP_NODShiLtJ_P0079557 Slc2a3 protein_coding protein_coding MGP_NODShiLtJ_T0079558.1 MGP_NODShiLtJ_G0031037.1 mouse_genomes_project 6 138145782 138164275 - Slc2a3 protein_coding retained_intron MGP_NODShiLtJ_T0079559.1 MGP_NODShiLtJ_G0031037.1 mouse_genomes_project 6 138147887 138164143 - MGP_NODShiLtJ_P0079559 Slc2a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079560.1 MGP_NODShiLtJ_G0031037.1 mouse_genomes_project 6 138149800 138151374 - Slc2a3 protein_coding retained_intron MGP_NODShiLtJ_T0079561.1 MGP_NODShiLtJ_G0031037.1 mouse_genomes_project 6 138155282 138235401 - MGP_NODShiLtJ_P0079561 Slc2a3 protein_coding protein_coding MGP_NODShiLtJ_T0079562.1 MGP_NODShiLtJ_G0031037.1 mouse_genomes_project 6 138155475 138203140 - MGP_NODShiLtJ_P0079562 Slc2a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079563.1 MGP_NODShiLtJ_G0031037.1 mouse_genomes_project 6 138161590 138164015 - MGP_NODShiLtJ_P0079563 Slc2a3 protein_coding protein_coding MGP_NODShiLtJ_T0079564.1 MGP_NODShiLtJ_G0031037.1 mouse_genomes_project 6 138161649 138164673 - MGP_NODShiLtJ_P0079564 Slc2a3 protein_coding protein_coding MGP_NODShiLtJ_T0015539.1 MGP_NODShiLtJ_G0013647.1 mouse_genomes_project 6 166052968 166053781 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004911.1 MGP_NODShiLtJ_G0004209.1 mouse_genomes_project 6 65042056 65081949 + BB365896 antisense antisense MGP_NODShiLtJ_T0076685.1 MGP_NODShiLtJ_G0030399.1 mouse_genomes_project 6 41820233 42013571 - MGP_NODShiLtJ_P0076685 Hipk2 protein_coding protein_coding MGP_NODShiLtJ_T0076686.1 MGP_NODShiLtJ_G0030399.1 mouse_genomes_project 6 41820238 42013619 - MGP_NODShiLtJ_P0076686 Hipk2 protein_coding protein_coding MGP_NODShiLtJ_T0076687.1 MGP_NODShiLtJ_G0030399.1 mouse_genomes_project 6 41820484 42013465 - MGP_NODShiLtJ_P0076687 Hipk2 protein_coding protein_coding MGP_NODShiLtJ_T0076688.1 MGP_NODShiLtJ_G0030399.1 mouse_genomes_project 6 41873618 41880180 - Hipk2 protein_coding processed_transcript MGP_NODShiLtJ_T0076689.1 MGP_NODShiLtJ_G0030399.1 mouse_genomes_project 6 41882366 41955834 - Hipk2 protein_coding retained_intron MGP_NODShiLtJ_T0076690.1 MGP_NODShiLtJ_G0030399.1 mouse_genomes_project 6 41955394 41974866 - Hipk2 protein_coding retained_intron MGP_NODShiLtJ_T0078662.1 MGP_NODShiLtJ_G0030874.1 mouse_genomes_project 6 107281241 107281340 + MGP_NODShiLtJ_P0078662 Gm10234 protein_coding protein_coding MGP_NODShiLtJ_T0005043.1 MGP_NODShiLtJ_G0004299.1 mouse_genomes_project 6 145352875 145356109 - Gm44000 antisense antisense MGP_NODShiLtJ_T0001877.1 MGP_NODShiLtJ_G0001789.1 mouse_genomes_project 6 4046064 4047418 - TEC TEC MGP_NODShiLtJ_T0100675.1 MGP_NODShiLtJ_G0039069.1 mouse_genomes_project 6 65879079 65879208 - Gm22622 snoRNA snoRNA MGP_NODShiLtJ_T0015283.1 MGP_NODShiLtJ_G0013391.1 mouse_genomes_project 6 74431496 74431662 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002009.1 MGP_NODShiLtJ_G0001921.1 mouse_genomes_project 6 98246799 98248490 + TEC TEC MGP_NODShiLtJ_T0079752.1 MGP_NODShiLtJ_G0031084.1 mouse_genomes_project 6 140715691 140721520 + Mlf2 protein_coding retained_intron MGP_NODShiLtJ_T0079753.1 MGP_NODShiLtJ_G0031084.1 mouse_genomes_project 6 140715710 140718667 + Mlf2 protein_coding retained_intron MGP_NODShiLtJ_T0079754.1 MGP_NODShiLtJ_G0031084.1 mouse_genomes_project 6 140715710 140716994 + Mlf2 protein_coding retained_intron MGP_NODShiLtJ_T0079755.1 MGP_NODShiLtJ_G0031084.1 mouse_genomes_project 6 140715730 140718661 + MGP_NODShiLtJ_P0079755 Mlf2 protein_coding protein_coding MGP_NODShiLtJ_T0079756.1 MGP_NODShiLtJ_G0031084.1 mouse_genomes_project 6 140715737 140720427 + MGP_NODShiLtJ_P0079756 Mlf2 protein_coding protein_coding MGP_NODShiLtJ_T0079757.1 MGP_NODShiLtJ_G0031084.1 mouse_genomes_project 6 140715781 140720426 + MGP_NODShiLtJ_P0079757 Mlf2 protein_coding protein_coding MGP_NODShiLtJ_T0079758.1 MGP_NODShiLtJ_G0031084.1 mouse_genomes_project 6 140716215 140718653 + MGP_NODShiLtJ_P0079758 Mlf2 protein_coding protein_coding MGP_NODShiLtJ_T0079759.1 MGP_NODShiLtJ_G0031084.1 mouse_genomes_project 6 140716929 140719575 + Mlf2 protein_coding retained_intron MGP_NODShiLtJ_T0080089.1 MGP_NODShiLtJ_G0031157.1 mouse_genomes_project 6 145912751 145917107 + MGP_NODShiLtJ_P0080089 Tmem52b protein_coding protein_coding MGP_NODShiLtJ_T0080090.1 MGP_NODShiLtJ_G0031157.1 mouse_genomes_project 6 145915517 145917196 + Tmem52b protein_coding retained_intron MGP_NODShiLtJ_T0080091.1 MGP_NODShiLtJ_G0031157.1 mouse_genomes_project 6 145916262 145917246 + Tmem52b protein_coding retained_intron MGP_NODShiLtJ_T0000160.1 MGP_NODShiLtJ_G0000117.1 mouse_genomes_project 6 76179077 76179548 + MGP_NODShiLtJ_P0000160 Igkv14-126 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0079602.1 MGP_NODShiLtJ_G0031050.1 mouse_genomes_project 6 138800316 138836449 + MGP_NODShiLtJ_P0079602 Vmn2r19 protein_coding protein_coding MGP_NODShiLtJ_T0080466.1 MGP_NODShiLtJ_G0031268.1 mouse_genomes_project 6 160337324 160388871 - MGP_NODShiLtJ_P0080466 Slco1a1 protein_coding protein_coding MGP_NODShiLtJ_T0080467.1 MGP_NODShiLtJ_G0031268.1 mouse_genomes_project 6 160337913 160389023 - MGP_NODShiLtJ_P0080467 Slco1a1 protein_coding protein_coding MGP_NODShiLtJ_T0080468.1 MGP_NODShiLtJ_G0031268.1 mouse_genomes_project 6 160338824 160388699 - MGP_NODShiLtJ_P0080468 Slco1a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080469.1 MGP_NODShiLtJ_G0031268.1 mouse_genomes_project 6 160359924 160388877 - Slco1a1 protein_coding retained_intron MGP_NODShiLtJ_T0002106.1 MGP_NODShiLtJ_G0002018.1 mouse_genomes_project 6 145922270 145925237 + TEC TEC MGP_NODShiLtJ_T0078162.1 MGP_NODShiLtJ_G0030774.1 mouse_genomes_project 6 97328569 97333198 + Figla protein_coding processed_transcript MGP_NODShiLtJ_T0078163.1 MGP_NODShiLtJ_G0030774.1 mouse_genomes_project 6 97329596 97333408 + MGP_NODShiLtJ_P0078163 Figla protein_coding protein_coding MGP_NODShiLtJ_T0015171.1 MGP_NODShiLtJ_G0013279.1 mouse_genomes_project 6 34972053 34972288 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004913.1 MGP_NODShiLtJ_G0004211.1 mouse_genomes_project 6 73711019 73721884 - Gm16838 antisense antisense MGP_NODShiLtJ_T0078134.1 MGP_NODShiLtJ_G0030768.1 mouse_genomes_project 6 97115959 97117651 - MGP_NODShiLtJ_P0078134 Nat8 protein_coding protein_coding MGP_NODShiLtJ_T0015276.1 MGP_NODShiLtJ_G0013384.1 mouse_genomes_project 6 73328743 73330346 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100676.1 MGP_NODShiLtJ_G0039070.1 mouse_genomes_project 6 65879858 65879987 - Gm22723 snoRNA snoRNA MGP_NODShiLtJ_T0008559.1 MGP_NODShiLtJ_G0006913.1 mouse_genomes_project 6 82579762 82609877 - Gm31747 lincRNA lincRNA MGP_NODShiLtJ_T0077850.1 MGP_NODShiLtJ_G0030715.1 mouse_genomes_project 6 93901736 93931948 - MGP_NODShiLtJ_P0077850 Sema4f protein_coding protein_coding MGP_NODShiLtJ_T0077851.1 MGP_NODShiLtJ_G0030715.1 mouse_genomes_project 6 93903921 93907233 - Sema4f protein_coding processed_transcript MGP_NODShiLtJ_T0077852.1 MGP_NODShiLtJ_G0030715.1 mouse_genomes_project 6 93905861 93931948 - Sema4f protein_coding retained_intron MGP_NODShiLtJ_T0077853.1 MGP_NODShiLtJ_G0030715.1 mouse_genomes_project 6 93908248 93931724 - MGP_NODShiLtJ_P0077853 Sema4f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015391.1 MGP_NODShiLtJ_G0013499.1 mouse_genomes_project 6 114689956 114690741 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076201.1 MGP_NODShiLtJ_G0030313.1 mouse_genomes_project 6 29076038 30142304 - MGP_NODShiLtJ_P0076201 Grm8 protein_coding protein_coding MGP_NODShiLtJ_T0076202.1 MGP_NODShiLtJ_G0030313.1 mouse_genomes_project 6 29076047 30133849 - MGP_NODShiLtJ_P0076202 Grm8 protein_coding protein_coding MGP_NODShiLtJ_T0076203.1 MGP_NODShiLtJ_G0030313.1 mouse_genomes_project 6 29076531 30133919 - MGP_NODShiLtJ_P0076203 Grm8 protein_coding protein_coding MGP_NODShiLtJ_T0076204.1 MGP_NODShiLtJ_G0030313.1 mouse_genomes_project 6 29721988 30141049 - MGP_NODShiLtJ_P0076204 Grm8 protein_coding protein_coding MGP_NODShiLtJ_T0076205.1 MGP_NODShiLtJ_G0030313.1 mouse_genomes_project 6 29927406 30142937 - Grm8 protein_coding processed_transcript MGP_NODShiLtJ_T0076206.1 MGP_NODShiLtJ_G0030313.1 mouse_genomes_project 6 30133787 30140853 - MGP_NODShiLtJ_P0076206 Grm8 protein_coding protein_coding MGP_NODShiLtJ_T0076207.1 MGP_NODShiLtJ_G0030313.1 mouse_genomes_project 6 30139751 30142144 - Grm8 protein_coding processed_transcript MGP_NODShiLtJ_T0008658.1 MGP_NODShiLtJ_G0006993.1 mouse_genomes_project 6 144714843 144717220 - Gm44009 lincRNA lincRNA MGP_NODShiLtJ_T0079632.1 MGP_NODShiLtJ_G0031063.1 mouse_genomes_project 6 140255341 140278302 - MGP_NODShiLtJ_P0079632 C1s1 protein_coding protein_coding MGP_NODShiLtJ_T0076987.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53283815 53307880 + MGP_NODShiLtJ_P0076987 Krba1 protein_coding protein_coding MGP_NODShiLtJ_T0076988.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53283843 53305234 + MGP_NODShiLtJ_P0076988 Krba1 protein_coding protein_coding MGP_NODShiLtJ_T0076989.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53283859 53288914 + Krba1 protein_coding retained_intron MGP_NODShiLtJ_T0076990.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53283861 53305229 + MGP_NODShiLtJ_P0076990 Krba1 protein_coding protein_coding MGP_NODShiLtJ_T0076991.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53283887 53307880 + MGP_NODShiLtJ_P0076991 Krba1 protein_coding protein_coding MGP_NODShiLtJ_T0076992.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53283927 53291709 + Krba1 protein_coding processed_transcript MGP_NODShiLtJ_T0076993.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53284095 53305796 + MGP_NODShiLtJ_P0076993 Krba1 protein_coding protein_coding MGP_NODShiLtJ_T0076994.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53292284 53296783 + Krba1 protein_coding processed_transcript MGP_NODShiLtJ_T0076995.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53297444 53307880 + Krba1 protein_coding retained_intron MGP_NODShiLtJ_T0076996.1 MGP_NODShiLtJ_G0030496.1 mouse_genomes_project 6 53301581 53308116 + Krba1 protein_coding retained_intron MGP_NODShiLtJ_T0077085.1 MGP_NODShiLtJ_G0030518.1 mouse_genomes_project 6 53759502 53760914 + MGP_NODShiLtJ_P0077085 Tmem176a protein_coding protein_coding MGP_NODShiLtJ_T0077086.1 MGP_NODShiLtJ_G0030518.1 mouse_genomes_project 6 53760095 53764453 + MGP_NODShiLtJ_P0077086 Tmem176a protein_coding protein_coding MGP_NODShiLtJ_T0077087.1 MGP_NODShiLtJ_G0030518.1 mouse_genomes_project 6 53760105 53765649 + MGP_NODShiLtJ_P0077087 Tmem176a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077088.1 MGP_NODShiLtJ_G0030518.1 mouse_genomes_project 6 53760131 53763945 + Tmem176a protein_coding retained_intron MGP_NODShiLtJ_T0077089.1 MGP_NODShiLtJ_G0030518.1 mouse_genomes_project 6 53760166 53763949 + MGP_NODShiLtJ_P0077089 Tmem176a protein_coding protein_coding MGP_NODShiLtJ_T0077090.1 MGP_NODShiLtJ_G0030518.1 mouse_genomes_project 6 53760353 53763359 + MGP_NODShiLtJ_P0077090 Tmem176a protein_coding protein_coding MGP_NODShiLtJ_T0077091.1 MGP_NODShiLtJ_G0030518.1 mouse_genomes_project 6 53761172 53762176 + MGP_NODShiLtJ_P0077091 Tmem176a protein_coding protein_coding MGP_NODShiLtJ_T0015496.1 MGP_NODShiLtJ_G0013604.1 mouse_genomes_project 6 148383377 148383490 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015189.1 MGP_NODShiLtJ_G0013297.1 mouse_genomes_project 6 44362804 44363185 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008688.1 MGP_NODShiLtJ_G0007012.1 mouse_genomes_project 6 161646256 161696210 - Gm31108 lincRNA lincRNA MGP_NODShiLtJ_T0015360.1 MGP_NODShiLtJ_G0013468.1 mouse_genomes_project 6 103063138 103064978 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102020.1 MGP_NODShiLtJ_G0040188.1 mouse_genomes_project 6 101577693 101577931 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015424.1 MGP_NODShiLtJ_G0013532.1 mouse_genomes_project 6 129272746 129277473 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000320.1 MGP_NODShiLtJ_G0000258.1 mouse_genomes_project 6 79203497 79203798 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0079325.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134120762 134243365 + MGP_NODShiLtJ_P0079325 Cacna2d4 protein_coding protein_coding MGP_NODShiLtJ_T0079326.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134120763 134166134 + Cacna2d4 protein_coding retained_intron MGP_NODShiLtJ_T0079327.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134120831 134241416 + MGP_NODShiLtJ_P0079327 Cacna2d4 protein_coding protein_coding MGP_NODShiLtJ_T0079328.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134135318 134191017 + Cacna2d4 protein_coding processed_transcript MGP_NODShiLtJ_T0079329.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134136467 134160994 + Cacna2d4 protein_coding processed_transcript MGP_NODShiLtJ_T0079330.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134156636 134160292 + Cacna2d4 protein_coding processed_transcript MGP_NODShiLtJ_T0079331.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134156837 134160335 + Cacna2d4 protein_coding retained_intron MGP_NODShiLtJ_T0079336.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134220378 134234163 + Cacna2d4 protein_coding processed_transcript MGP_NODShiLtJ_T0079337.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134220411 134227420 + Cacna2d4 protein_coding retained_intron MGP_NODShiLtJ_T0079338.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134220460 134241093 + MGP_NODShiLtJ_P0079338 Cacna2d4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079339.1 MGP_NODShiLtJ_G0030996.1 mouse_genomes_project 6 134222153 134237359 + Cacna2d4 protein_coding processed_transcript MGP_NODShiLtJ_T0004986.1 MGP_NODShiLtJ_G0004254.1 mouse_genomes_project 6 107061620 107065259 - Kbtbd8os antisense antisense MGP_NODShiLtJ_T0076827.1 MGP_NODShiLtJ_G0030445.1 mouse_genomes_project 6 45481626 45486577 + MGP_NODShiLtJ_P0076827 Sval3 protein_coding protein_coding MGP_NODShiLtJ_T0079957.1 MGP_NODShiLtJ_G0031122.1 mouse_genomes_project 6 143598784 143670854 + MGP_NODShiLtJ_P0079957 Cracr2a protein_coding protein_coding MGP_NODShiLtJ_T0079958.1 MGP_NODShiLtJ_G0031122.1 mouse_genomes_project 6 143615417 143670759 + MGP_NODShiLtJ_P0079958 Cracr2a protein_coding protein_coding MGP_NODShiLtJ_T0015538.1 MGP_NODShiLtJ_G0013646.1 mouse_genomes_project 6 165945339 165946821 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004905.1 MGP_NODShiLtJ_G0004203.1 mouse_genomes_project 6 59129422 59183510 + Gm43938 antisense antisense MGP_NODShiLtJ_T0015197.1 MGP_NODShiLtJ_G0013305.1 mouse_genomes_project 6 46878942 46879365 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018098.1 MGP_NODShiLtJ_G0015493.1 mouse_genomes_project 6 53651434 53653694 - Gimap1os processed_transcript antisense MGP_NODShiLtJ_T0018099.1 MGP_NODShiLtJ_G0015493.1 mouse_genomes_project 6 53652597 53654517 - Gimap1os processed_transcript retained_intron MGP_NODShiLtJ_T0001973.1 MGP_NODShiLtJ_G0001885.1 mouse_genomes_project 6 81857216 81858170 - TEC TEC MGP_NODShiLtJ_T0075806.1 MGP_NODShiLtJ_G0030230.1 mouse_genomes_project 6 463764 563749 - MGP_NODShiLtJ_P0075806 Calcr protein_coding protein_coding MGP_NODShiLtJ_T0075807.1 MGP_NODShiLtJ_G0030230.1 mouse_genomes_project 6 463804 564833 - MGP_NODShiLtJ_P0075807 Calcr protein_coding protein_coding MGP_NODShiLtJ_T0075808.1 MGP_NODShiLtJ_G0030230.1 mouse_genomes_project 6 463817 564777 - MGP_NODShiLtJ_P0075808 Calcr protein_coding protein_coding MGP_NODShiLtJ_T0075809.1 MGP_NODShiLtJ_G0030230.1 mouse_genomes_project 6 464906 548009 - MGP_NODShiLtJ_P0075809 Calcr protein_coding protein_coding MGP_NODShiLtJ_T0075810.1 MGP_NODShiLtJ_G0030230.1 mouse_genomes_project 6 464906 548009 - MGP_NODShiLtJ_P0075810 Calcr protein_coding protein_coding MGP_NODShiLtJ_T0015250.1 MGP_NODShiLtJ_G0013358.1 mouse_genomes_project 6 65115924 65118358 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008432.1 MGP_NODShiLtJ_G0006821.1 mouse_genomes_project 6 5012703 5025006 + Gm44217 lincRNA lincRNA MGP_NODShiLtJ_T0098067.1 MGP_NODShiLtJ_G0036479.1 mouse_genomes_project 6 125959345 125959456 + Gm22093 rRNA rRNA MGP_NODShiLtJ_T0076591.1 MGP_NODShiLtJ_G0030377.1 mouse_genomes_project 6 37771196 37851130 + MGP_NODShiLtJ_P0076591 Nup205 protein_coding protein_coding MGP_NODShiLtJ_T0076592.1 MGP_NODShiLtJ_G0030377.1 mouse_genomes_project 6 37771205 37851130 + MGP_NODShiLtJ_P0076592 Nup205 protein_coding protein_coding MGP_NODShiLtJ_T0076593.1 MGP_NODShiLtJ_G0030377.1 mouse_genomes_project 6 37771391 37803687 + Nup205 protein_coding retained_intron MGP_NODShiLtJ_T0076594.1 MGP_NODShiLtJ_G0030377.1 mouse_genomes_project 6 37771404 37851124 + MGP_NODShiLtJ_P0076594 Nup205 protein_coding protein_coding MGP_NODShiLtJ_T0076595.1 MGP_NODShiLtJ_G0030377.1 mouse_genomes_project 6 37803080 37851130 + Nup205 protein_coding processed_transcript MGP_NODShiLtJ_T0076596.1 MGP_NODShiLtJ_G0030377.1 mouse_genomes_project 6 37825480 37840734 + Nup205 protein_coding retained_intron MGP_NODShiLtJ_T0076597.1 MGP_NODShiLtJ_G0030377.1 mouse_genomes_project 6 37847738 37850006 + Nup205 protein_coding retained_intron MGP_NODShiLtJ_T0098430.1 MGP_NODShiLtJ_G0036831.1 mouse_genomes_project 6 95054182 95056955 + Gm43920 sense_intronic sense_intronic MGP_NODShiLtJ_T0002093.1 MGP_NODShiLtJ_G0002005.1 mouse_genomes_project 6 140490948 140491246 - TEC TEC MGP_NODShiLtJ_T0010669.1 MGP_NODShiLtJ_G0008802.1 mouse_genomes_project 6 83731109 83731219 - Gm22254 miRNA miRNA MGP_NODShiLtJ_T0015330.1 MGP_NODShiLtJ_G0013438.1 mouse_genomes_project 6 92272671 92273124 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002132.1 MGP_NODShiLtJ_G0002044.1 mouse_genomes_project 6 163995280 163996190 + TEC TEC MGP_NODShiLtJ_T0076961.1 MGP_NODShiLtJ_G0030488.1 mouse_genomes_project 6 52618475 52635591 - MGP_NODShiLtJ_P0076961 Pdia4 protein_coding protein_coding MGP_NODShiLtJ_T0076962.1 MGP_NODShiLtJ_G0030488.1 mouse_genomes_project 6 52629218 52635525 - Pdia4 protein_coding processed_transcript MGP_NODShiLtJ_T0077736.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81470081 81490490 + MGP_NODShiLtJ_P0077736 Capg protein_coding protein_coding MGP_NODShiLtJ_T0077737.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81470227 81490488 + MGP_NODShiLtJ_P0077737 Capg protein_coding protein_coding MGP_NODShiLtJ_T0077738.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81471460 81483021 + MGP_NODShiLtJ_P0077738 Capg protein_coding protein_coding MGP_NODShiLtJ_T0077739.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81473599 81484536 + MGP_NODShiLtJ_P0077739 Capg protein_coding protein_coding MGP_NODShiLtJ_T0077740.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81474899 81490490 + MGP_NODShiLtJ_P0077740 Capg protein_coding protein_coding MGP_NODShiLtJ_T0077741.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81475058 81484507 + Capg protein_coding retained_intron MGP_NODShiLtJ_T0077742.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81475077 81482618 + MGP_NODShiLtJ_P0077742 Capg protein_coding protein_coding MGP_NODShiLtJ_T0077743.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81475084 81482387 + Capg protein_coding retained_intron MGP_NODShiLtJ_T0077744.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81475267 81482576 + MGP_NODShiLtJ_P0077744 Capg protein_coding protein_coding MGP_NODShiLtJ_T0077745.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81478546 81485023 + MGP_NODShiLtJ_P0077745 Capg protein_coding protein_coding MGP_NODShiLtJ_T0077746.1 MGP_NODShiLtJ_G0030687.1 mouse_genomes_project 6 81482747 81484613 + Capg protein_coding retained_intron MGP_NODShiLtJ_T0098438.1 MGP_NODShiLtJ_G0036839.1 mouse_genomes_project 6 144451207 144452584 - Gm44190 sense_intronic sense_intronic MGP_NODShiLtJ_T0101378.1 MGP_NODShiLtJ_G0039595.1 mouse_genomes_project 6 148247247 148254108 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0015416.1 MGP_NODShiLtJ_G0013524.1 mouse_genomes_project 6 127439014 127439141 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079635.1 MGP_NODShiLtJ_G0031064.1 mouse_genomes_project 6 140373728 140394267 - MGP_NODShiLtJ_P0079635 protein_coding protein_coding MGP_NODShiLtJ_T0098429.1 MGP_NODShiLtJ_G0036830.1 mouse_genomes_project 6 52873798 52874206 - sense_intronic sense_intronic MGP_NODShiLtJ_T0001878.1 MGP_NODShiLtJ_G0001790.1 mouse_genomes_project 6 4594091 4596769 + TEC TEC MGP_NODShiLtJ_T0002126.1 MGP_NODShiLtJ_G0002038.1 mouse_genomes_project 6 158865220 158867471 - TEC TEC MGP_NODShiLtJ_T0077336.1 MGP_NODShiLtJ_G0030576.1 mouse_genomes_project 6 60763029 60775151 + MGP_NODShiLtJ_P0077336 Aqp1 protein_coding protein_coding MGP_NODShiLtJ_T0078769.1 MGP_NODShiLtJ_G0030897.1 mouse_genomes_project 6 114813917 114817464 - Cntn3 protein_coding retained_intron MGP_NODShiLtJ_T0078770.1 MGP_NODShiLtJ_G0030897.1 mouse_genomes_project 6 114814566 115157706 - MGP_NODShiLtJ_P0078770 Cntn3 protein_coding protein_coding MGP_NODShiLtJ_T0078771.1 MGP_NODShiLtJ_G0030897.1 mouse_genomes_project 6 114814568 115157710 - MGP_NODShiLtJ_P0078771 Cntn3 protein_coding protein_coding MGP_NODShiLtJ_T0000206.1 MGP_NODShiLtJ_G0000149.1 mouse_genomes_project 6 78744567 78745135 - MGP_NODShiLtJ_P0000206 Igkv7-33 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000207.1 MGP_NODShiLtJ_G0000149.1 mouse_genomes_project 6 78744567 78745135 - MGP_NODShiLtJ_P0000207 Igkv7-33 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0080112.1 MGP_NODShiLtJ_G0031164.1 mouse_genomes_project 6 146098732 146112987 - MGP_NODShiLtJ_P0080112 protein_coding protein_coding MGP_NODShiLtJ_T0079135.1 MGP_NODShiLtJ_G0030963.1 mouse_genomes_project 6 130415295 130418542 - MGP_NODShiLtJ_P0079135 Rpl32 protein_coding protein_coding MGP_NODShiLtJ_T0079136.1 MGP_NODShiLtJ_G0030963.1 mouse_genomes_project 6 130415302 130418143 - MGP_NODShiLtJ_P0079136 Rpl32 protein_coding protein_coding MGP_NODShiLtJ_T0080400.1 MGP_NODShiLtJ_G0031254.1 mouse_genomes_project 6 156575609 156577066 - MGP_NODShiLtJ_P0080400 Igbp1b protein_coding protein_coding MGP_NODShiLtJ_T0015116.1 MGP_NODShiLtJ_G0013224.1 mouse_genomes_project 6 3820512 3821900 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005006.1 MGP_NODShiLtJ_G0004266.1 mouse_genomes_project 6 127778882 127797763 - Gm15492 antisense antisense MGP_NODShiLtJ_T0101174.1 MGP_NODShiLtJ_G0039494.1 mouse_genomes_project 6 73235273 73236343 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101175.1 MGP_NODShiLtJ_G0039494.1 mouse_genomes_project 6 73235393 73236111 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0015430.1 MGP_NODShiLtJ_G0013538.1 mouse_genomes_project 6 130832700 130833098 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002087.1 MGP_NODShiLtJ_G0001999.1 mouse_genomes_project 6 132737624 132738816 - TEC TEC MGP_NODShiLtJ_T0011518.1 MGP_NODShiLtJ_G0009651.1 mouse_genomes_project 6 17108428 17108684 + Gm27542 misc_RNA misc_RNA MGP_NODShiLtJ_T0015343.1 MGP_NODShiLtJ_G0013451.1 mouse_genomes_project 6 96245885 96246279 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008500.1 MGP_NODShiLtJ_G0006864.1 mouse_genomes_project 6 44397661 44404881 + 5830405F06Rik lincRNA lincRNA MGP_NODShiLtJ_T0008501.1 MGP_NODShiLtJ_G0006864.1 mouse_genomes_project 6 44397662 44402923 + 5830405F06Rik lincRNA lincRNA MGP_NODShiLtJ_T0001871.1 MGP_NODShiLtJ_G0001783.1 mouse_genomes_project 6 1937917 1942066 + TEC TEC MGP_NODShiLtJ_T0015178.1 MGP_NODShiLtJ_G0013286.1 mouse_genomes_project 6 40471546 40472093 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078940.1 MGP_NODShiLtJ_G0030926.1 mouse_genomes_project 6 127846828 127857691 - MGP_NODShiLtJ_P0078940 Tada3 protein_coding protein_coding MGP_NODShiLtJ_T0078941.1 MGP_NODShiLtJ_G0030926.1 mouse_genomes_project 6 127847089 127851335 - Tada3 protein_coding retained_intron MGP_NODShiLtJ_T0078942.1 MGP_NODShiLtJ_G0030926.1 mouse_genomes_project 6 127847161 127857943 - MGP_NODShiLtJ_P0078942 Tada3 protein_coding protein_coding MGP_NODShiLtJ_T0078943.1 MGP_NODShiLtJ_G0030926.1 mouse_genomes_project 6 127854558 127857913 - Tada3 protein_coding retained_intron MGP_NODShiLtJ_T0078944.1 MGP_NODShiLtJ_G0030926.1 mouse_genomes_project 6 127854654 127857913 - Tada3 protein_coding retained_intron MGP_NODShiLtJ_T0078945.1 MGP_NODShiLtJ_G0030926.1 mouse_genomes_project 6 127856176 127857930 - MGP_NODShiLtJ_P0078945 Tada3 protein_coding protein_coding MGP_NODShiLtJ_T0015368.1 MGP_NODShiLtJ_G0013476.1 mouse_genomes_project 6 106194945 106195709 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076169.1 MGP_NODShiLtJ_G0030301.1 mouse_genomes_project 6 25386287 25463336 - MGP_NODShiLtJ_P0076169 Iqub protein_coding protein_coding MGP_NODShiLtJ_T0099447.1 MGP_NODShiLtJ_G0037841.1 mouse_genomes_project 6 116523867 116523929 + Gm24784 snRNA snRNA MGP_NODShiLtJ_T0080092.1 MGP_NODShiLtJ_G0031158.1 mouse_genomes_project 6 145933665 145942814 + MGP_NODShiLtJ_P0080092 Gabarapl1 protein_coding protein_coding MGP_NODShiLtJ_T0080168.1 MGP_NODShiLtJ_G0031194.1 mouse_genomes_project 6 149729869 149730799 - MGP_NODShiLtJ_P0080168 Tas2r122 protein_coding protein_coding MGP_NODShiLtJ_T0079509.1 MGP_NODShiLtJ_G0031027.1 mouse_genomes_project 6 137630734 137643625 - MGP_NODShiLtJ_P0079509 Klrg1 protein_coding protein_coding MGP_NODShiLtJ_T0008519.1 MGP_NODShiLtJ_G0006879.1 mouse_genomes_project 6 56513796 56526752 - Gm26677 lincRNA lincRNA MGP_NODShiLtJ_T0001896.1 MGP_NODShiLtJ_G0001808.1 mouse_genomes_project 6 30629061 30631043 + TEC TEC MGP_NODShiLtJ_T0010686.1 MGP_NODShiLtJ_G0008819.1 mouse_genomes_project 6 118791703 118791783 + Gm25570 miRNA miRNA MGP_NODShiLtJ_T0098063.1 MGP_NODShiLtJ_G0036475.1 mouse_genomes_project 6 66650914 66651033 + n-R5s162 rRNA rRNA MGP_NODShiLtJ_T0000186.1 MGP_NODShiLtJ_G0000135.1 mouse_genomes_project 6 77339305 77339782 - MGP_NODShiLtJ_P0000186 Gm42543 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0080120.1 MGP_NODShiLtJ_G0031168.1 mouse_genomes_project 6 146289916 146342493 - MGP_NODShiLtJ_P0080120 Klra17 protein_coding protein_coding MGP_NODShiLtJ_T0080121.1 MGP_NODShiLtJ_G0031168.1 mouse_genomes_project 6 146289926 146342495 - MGP_NODShiLtJ_P0080121 Klra17 protein_coding protein_coding MGP_NODShiLtJ_T0002058.1 MGP_NODShiLtJ_G0001970.1 mouse_genomes_project 6 113367077 113367684 - TEC TEC MGP_NODShiLtJ_T0077753.1 MGP_NODShiLtJ_G0030689.1 mouse_genomes_project 6 81525458 81536605 + MGP_NODShiLtJ_P0077753 Retsat protein_coding protein_coding MGP_NODShiLtJ_T0077754.1 MGP_NODShiLtJ_G0030689.1 mouse_genomes_project 6 81525611 81534332 + MGP_NODShiLtJ_P0077754 Retsat protein_coding protein_coding MGP_NODShiLtJ_T0077755.1 MGP_NODShiLtJ_G0030689.1 mouse_genomes_project 6 81525611 81534332 + MGP_NODShiLtJ_P0077755 Retsat protein_coding protein_coding MGP_NODShiLtJ_T0077756.1 MGP_NODShiLtJ_G0030689.1 mouse_genomes_project 6 81531330 81533337 + Retsat protein_coding processed_transcript MGP_NODShiLtJ_T0077757.1 MGP_NODShiLtJ_G0030689.1 mouse_genomes_project 6 81532919 81534393 + MGP_NODShiLtJ_P0077757 Retsat protein_coding protein_coding MGP_NODShiLtJ_T0077758.1 MGP_NODShiLtJ_G0030689.1 mouse_genomes_project 6 81533592 81534162 + MGP_NODShiLtJ_P0077758 Retsat protein_coding protein_coding MGP_NODShiLtJ_T0004882.1 MGP_NODShiLtJ_G0004188.1 mouse_genomes_project 6 43100664 43101104 - Gm26833 antisense antisense MGP_NODShiLtJ_T0079010.1 MGP_NODShiLtJ_G0030940.1 mouse_genomes_project 6 128118326 128125997 + MGP_NODShiLtJ_P0079010 Vhl protein_coding protein_coding MGP_NODShiLtJ_T0079011.1 MGP_NODShiLtJ_G0030940.1 mouse_genomes_project 6 128119088 128124125 + Vhl protein_coding processed_transcript MGP_NODShiLtJ_T0079012.1 MGP_NODShiLtJ_G0030940.1 mouse_genomes_project 6 128119296 128123921 + Vhl protein_coding processed_transcript MGP_NODShiLtJ_T0079013.1 MGP_NODShiLtJ_G0030940.1 mouse_genomes_project 6 128123870 128125991 + MGP_NODShiLtJ_P0079013 Vhl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0004998.1 MGP_NODShiLtJ_G0004262.1 mouse_genomes_project 6 124844925 124851120 - Gm20387 antisense antisense MGP_NODShiLtJ_T0000321.1 MGP_NODShiLtJ_G0000259.1 mouse_genomes_project 6 79209440 79210033 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0100686.1 MGP_NODShiLtJ_G0039080.1 mouse_genomes_project 6 82120794 82120990 - Gm24533 snoRNA snoRNA MGP_NODShiLtJ_T0076216.1 MGP_NODShiLtJ_G0030317.1 mouse_genomes_project 6 30474300 30487917 + MGP_NODShiLtJ_P0076216 Fscn3 protein_coding protein_coding MGP_NODShiLtJ_T0076217.1 MGP_NODShiLtJ_G0030317.1 mouse_genomes_project 6 30481744 30483426 + Fscn3 protein_coding processed_transcript MGP_NODShiLtJ_T0015398.1 MGP_NODShiLtJ_G0013506.1 mouse_genomes_project 6 118383616 118391151 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102000.1 MGP_NODShiLtJ_G0040168.1 mouse_genomes_project 6 63882725 63883635 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100668.1 MGP_NODShiLtJ_G0039062.1 mouse_genomes_project 6 57898327 57898449 - Gm24355 snoRNA snoRNA MGP_NODShiLtJ_T0008623.1 MGP_NODShiLtJ_G0006960.1 mouse_genomes_project 6 119095200 119101033 - Gm15631 lincRNA lincRNA MGP_NODShiLtJ_T0098431.1 MGP_NODShiLtJ_G0036832.1 mouse_genomes_project 6 98356751 98357399 + Gm44091 sense_intronic sense_intronic MGP_NODShiLtJ_T0099424.1 MGP_NODShiLtJ_G0037818.1 mouse_genomes_project 6 42422524 42422623 - Gm26008 snRNA snRNA MGP_NODShiLtJ_T0076997.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53315959 53334765 - MGP_NODShiLtJ_P0076997 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0076998.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53315959 53338606 - MGP_NODShiLtJ_P0076998 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0076999.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53315959 53338709 - MGP_NODShiLtJ_P0076999 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0077000.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53322428 53338515 - MGP_NODShiLtJ_P0077000 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0077001.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53326081 53338967 - MGP_NODShiLtJ_P0077001 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0077002.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53326081 53338228 - MGP_NODShiLtJ_P0077002 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0077003.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53326081 53338222 - MGP_NODShiLtJ_P0077003 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0077004.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53326104 53338584 - MGP_NODShiLtJ_P0077004 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0077005.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53327100 53338835 - MGP_NODShiLtJ_P0077005 Zfp467 protein_coding protein_coding MGP_NODShiLtJ_T0077006.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53328858 53338500 - MGP_NODShiLtJ_P0077006 Zfp467 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077007.1 MGP_NODShiLtJ_G0030497.1 mouse_genomes_project 6 53333491 53338636 - Zfp467 protein_coding retained_intron MGP_NODShiLtJ_T0004876.1 MGP_NODShiLtJ_G0004183.1 mouse_genomes_project 6 42060832 42128063 - Gm42962 antisense antisense MGP_NODShiLtJ_T0099446.1 MGP_NODShiLtJ_G0037840.1 mouse_genomes_project 6 115585934 115586042 + Gm26022 snRNA snRNA MGP_NODShiLtJ_T0078298.1 MGP_NODShiLtJ_G0030800.1 mouse_genomes_project 6 99048618 99097171 - MGP_NODShiLtJ_P0078298 Aplf protein_coding protein_coding MGP_NODShiLtJ_T0078299.1 MGP_NODShiLtJ_G0030800.1 mouse_genomes_project 6 99050576 99097088 - MGP_NODShiLtJ_P0078299 Aplf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078300.1 MGP_NODShiLtJ_G0030800.1 mouse_genomes_project 6 99050581 99097217 - MGP_NODShiLtJ_P0078300 Aplf protein_coding protein_coding MGP_NODShiLtJ_T0078301.1 MGP_NODShiLtJ_G0030800.1 mouse_genomes_project 6 99071923 99097153 - Aplf protein_coding retained_intron MGP_NODShiLtJ_T0078071.1 MGP_NODShiLtJ_G0030753.1 mouse_genomes_project 6 95725275 95741898 - MGP_NODShiLtJ_P0078071 Cyp26b1 protein_coding protein_coding MGP_NODShiLtJ_T0078072.1 MGP_NODShiLtJ_G0030753.1 mouse_genomes_project 6 95728102 95741898 - MGP_NODShiLtJ_P0078072 Cyp26b1 protein_coding protein_coding MGP_NODShiLtJ_T0001876.1 MGP_NODShiLtJ_G0001788.1 mouse_genomes_project 6 4035047 4037069 - TEC TEC MGP_NODShiLtJ_T0080318.1 MGP_NODShiLtJ_G0031241.1 mouse_genomes_project 6 154511391 154522098 - MGP_NODShiLtJ_P0080318 Art4 protein_coding protein_coding MGP_NODShiLtJ_T0015350.1 MGP_NODShiLtJ_G0013458.1 mouse_genomes_project 6 96783137 96783606 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015305.1 MGP_NODShiLtJ_G0013413.1 mouse_genomes_project 6 76573247 76573537 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015254.1 MGP_NODShiLtJ_G0013362.1 mouse_genomes_project 6 67497211 67497736 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099422.1 MGP_NODShiLtJ_G0037816.1 mouse_genomes_project 6 37846159 37846315 + Gm23435 snRNA snRNA MGP_NODShiLtJ_T0077482.1 MGP_NODShiLtJ_G0030630.1 mouse_genomes_project 6 67543756 67573019 + Mmrn1 protein_coding retained_intron MGP_NODShiLtJ_T0077483.1 MGP_NODShiLtJ_G0030630.1 mouse_genomes_project 6 67571376 67618378 + MGP_NODShiLtJ_P0077483 Mmrn1 protein_coding protein_coding MGP_NODShiLtJ_T0077484.1 MGP_NODShiLtJ_G0030630.1 mouse_genomes_project 6 67571378 67618378 + MGP_NODShiLtJ_P0077484 Mmrn1 protein_coding protein_coding MGP_NODShiLtJ_T0015147.1 MGP_NODShiLtJ_G0013255.1 mouse_genomes_project 6 18389890 18390154 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008520.1 MGP_NODShiLtJ_G0006880.1 mouse_genomes_project 6 56513796 56526766 + Gm6559 lincRNA lincRNA MGP_NODShiLtJ_T0079628.1 MGP_NODShiLtJ_G0031060.1 mouse_genomes_project 6 140223664 140248625 + MGP_NODShiLtJ_P0079628 protein_coding protein_coding MGP_NODShiLtJ_T0077349.1 MGP_NODShiLtJ_G0030580.1 mouse_genomes_project 6 61289594 61445008 + MGP_NODShiLtJ_P0077349 Ccdc129 protein_coding protein_coding MGP_NODShiLtJ_T0077350.1 MGP_NODShiLtJ_G0030580.1 mouse_genomes_project 6 61345872 61445121 + Ccdc129 protein_coding processed_transcript MGP_NODShiLtJ_T0015452.1 MGP_NODShiLtJ_G0013560.1 mouse_genomes_project 6 137668183 137668422 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005017.1 MGP_NODShiLtJ_G0004277.1 mouse_genomes_project 6 136057982 136058948 + Gm43916 antisense antisense MGP_NODShiLtJ_T0008446.1 MGP_NODShiLtJ_G0006830.1 mouse_genomes_project 6 16723187 16723795 + Gm29591 lincRNA lincRNA MGP_NODShiLtJ_T0077475.1 MGP_NODShiLtJ_G0030626.1 mouse_genomes_project 6 65319300 65322464 + MGP_NODShiLtJ_P0077475 Tigd2 protein_coding protein_coding MGP_NODShiLtJ_T0077769.1 MGP_NODShiLtJ_G0030693.1 mouse_genomes_project 6 81927635 81928779 - MGP_NODShiLtJ_P0077769 protein_coding protein_coding MGP_NODShiLtJ_T0077770.1 MGP_NODShiLtJ_G0030693.1 mouse_genomes_project 6 81927641 81928593 - MGP_NODShiLtJ_P0077770 protein_coding protein_coding MGP_NODShiLtJ_T0077771.1 MGP_NODShiLtJ_G0030693.1 mouse_genomes_project 6 81927649 81929038 - MGP_NODShiLtJ_P0077771 protein_coding protein_coding MGP_NODShiLtJ_T0077772.1 MGP_NODShiLtJ_G0030693.1 mouse_genomes_project 6 81927938 81928690 - MGP_NODShiLtJ_P0077772 protein_coding protein_coding MGP_NODShiLtJ_T0002027.1 MGP_NODShiLtJ_G0001939.1 mouse_genomes_project 6 100221797 100224685 + TEC TEC MGP_NODShiLtJ_T0077164.1 MGP_NODShiLtJ_G0030537.1 mouse_genomes_project 6 56568166 56597258 + MGP_NODShiLtJ_P0077164 Nfe2l3 protein_coding protein_coding MGP_NODShiLtJ_T0077165.1 MGP_NODShiLtJ_G0030537.1 mouse_genomes_project 6 56568245 56572431 + Nfe2l3 protein_coding processed_transcript MGP_NODShiLtJ_T0077166.1 MGP_NODShiLtJ_G0030537.1 mouse_genomes_project 6 56568245 56595366 + MGP_NODShiLtJ_P0077166 Nfe2l3 protein_coding protein_coding MGP_NODShiLtJ_T0099440.1 MGP_NODShiLtJ_G0037834.1 mouse_genomes_project 6 105606354 105606460 + Gm23035 snRNA snRNA MGP_NODShiLtJ_T0079433.1 MGP_NODShiLtJ_G0031012.1 mouse_genomes_project 6 135752775 135817856 + Cecr2 protein_coding retained_intron MGP_NODShiLtJ_T0079434.1 MGP_NODShiLtJ_G0031012.1 mouse_genomes_project 6 135752827 135865836 + MGP_NODShiLtJ_P0079434 Cecr2 protein_coding protein_coding MGP_NODShiLtJ_T0079435.1 MGP_NODShiLtJ_G0031012.1 mouse_genomes_project 6 135754289 135817684 + Cecr2 protein_coding processed_transcript MGP_NODShiLtJ_T0079436.1 MGP_NODShiLtJ_G0031012.1 mouse_genomes_project 6 135754336 135861552 + MGP_NODShiLtJ_P0079436 Cecr2 protein_coding protein_coding MGP_NODShiLtJ_T0079437.1 MGP_NODShiLtJ_G0031012.1 mouse_genomes_project 6 135827461 135851327 + Cecr2 protein_coding processed_transcript MGP_NODShiLtJ_T0079438.1 MGP_NODShiLtJ_G0031012.1 mouse_genomes_project 6 135827528 135850202 + MGP_NODShiLtJ_P0079438 Cecr2 protein_coding protein_coding MGP_NODShiLtJ_T0079439.1 MGP_NODShiLtJ_G0031012.1 mouse_genomes_project 6 135828658 135833666 + Cecr2 protein_coding retained_intron MGP_NODShiLtJ_T0079440.1 MGP_NODShiLtJ_G0031012.1 mouse_genomes_project 6 135852786 135856362 + MGP_NODShiLtJ_P0079440 Cecr2 protein_coding protein_coding MGP_NODShiLtJ_T0015240.1 MGP_NODShiLtJ_G0013348.1 mouse_genomes_project 6 59505350 59505549 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076893.1 MGP_NODShiLtJ_G0030466.1 mouse_genomes_project 6 46303723 46304677 + MGP_NODShiLtJ_P0076893 Olfr453 protein_coding protein_coding MGP_NODShiLtJ_T0078597.1 MGP_NODShiLtJ_G0030860.1 mouse_genomes_project 6 103562382 103564286 + 4930590J08Rik protein_coding retained_intron MGP_NODShiLtJ_T0078598.1 MGP_NODShiLtJ_G0030860.1 mouse_genomes_project 6 103563806 103612382 + MGP_NODShiLtJ_P0078598 4930590J08Rik protein_coding protein_coding MGP_NODShiLtJ_T0078599.1 MGP_NODShiLtJ_G0030860.1 mouse_genomes_project 6 103576252 103612297 + MGP_NODShiLtJ_P0078599 4930590J08Rik protein_coding protein_coding MGP_NODShiLtJ_T0078600.1 MGP_NODShiLtJ_G0030860.1 mouse_genomes_project 6 103605920 103611687 + MGP_NODShiLtJ_P0078600 4930590J08Rik protein_coding protein_coding MGP_NODShiLtJ_T0002636.1 MGP_NODShiLtJ_G0002518.1 mouse_genomes_project 6 44504812 44505303 + MGP_NODShiLtJ_P0002636 Trbv16 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0078713.1 MGP_NODShiLtJ_G0030886.1 mouse_genomes_project 6 110441433 110556313 - MGP_NODShiLtJ_P0078713 Gm765 protein_coding protein_coding MGP_NODShiLtJ_T0078714.1 MGP_NODShiLtJ_G0030886.1 mouse_genomes_project 6 110555020 110556218 - Gm765 protein_coding retained_intron MGP_NODShiLtJ_T0015185.1 MGP_NODShiLtJ_G0013293.1 mouse_genomes_project 6 43051478 43052052 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077333.1 MGP_NODShiLtJ_G0030575.1 mouse_genomes_project 6 60627503 60746850 + MGP_NODShiLtJ_P0077333 Fam188b protein_coding protein_coding MGP_NODShiLtJ_T0077334.1 MGP_NODShiLtJ_G0030575.1 mouse_genomes_project 6 60627503 60704444 + MGP_NODShiLtJ_P0077334 Fam188b protein_coding protein_coding MGP_NODShiLtJ_T0077335.1 MGP_NODShiLtJ_G0030575.1 mouse_genomes_project 6 60703973 60744943 + Fam188b protein_coding processed_transcript MGP_NODShiLtJ_T0002090.1 MGP_NODShiLtJ_G0002002.1 mouse_genomes_project 6 136308186 136309695 - TEC TEC MGP_NODShiLtJ_T0008672.1 MGP_NODShiLtJ_G0007002.1 mouse_genomes_project 6 152386737 152427055 + Lockd lincRNA lincRNA MGP_NODShiLtJ_T0008673.1 MGP_NODShiLtJ_G0007002.1 mouse_genomes_project 6 152386743 152419452 + Lockd lincRNA lincRNA MGP_NODShiLtJ_T0008674.1 MGP_NODShiLtJ_G0007002.1 mouse_genomes_project 6 152386743 152419686 + Lockd lincRNA lincRNA MGP_NODShiLtJ_T0008675.1 MGP_NODShiLtJ_G0007002.1 mouse_genomes_project 6 152386778 152419684 + Lockd lincRNA lincRNA MGP_NODShiLtJ_T0008676.1 MGP_NODShiLtJ_G0007002.1 mouse_genomes_project 6 152386800 152419827 + Lockd lincRNA lincRNA MGP_NODShiLtJ_T0078373.1 MGP_NODShiLtJ_G0030815.1 mouse_genomes_project 6 99937450 99974068 + MGP_NODShiLtJ_P0078373 Ruvbl1 protein_coding protein_coding MGP_NODShiLtJ_T0078374.1 MGP_NODShiLtJ_G0030815.1 mouse_genomes_project 6 99937569 99974060 + MGP_NODShiLtJ_P0078374 Ruvbl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078375.1 MGP_NODShiLtJ_G0030815.1 mouse_genomes_project 6 99937768 99958285 + MGP_NODShiLtJ_P0078375 Ruvbl1 protein_coding protein_coding MGP_NODShiLtJ_T0018115.1 MGP_NODShiLtJ_G0015498.1 mouse_genomes_project 6 59579190 59588345 - Gm15527 processed_transcript retained_intron MGP_NODShiLtJ_T0018116.1 MGP_NODShiLtJ_G0015498.1 mouse_genomes_project 6 59581615 59612507 - Gm15527 processed_transcript antisense MGP_NODShiLtJ_T0018117.1 MGP_NODShiLtJ_G0015498.1 mouse_genomes_project 6 59581631 59612509 - Gm15527 processed_transcript antisense MGP_NODShiLtJ_T0008694.1 MGP_NODShiLtJ_G0007014.1 mouse_genomes_project 6 162101809 162103353 - 4930579D09Rik lincRNA lincRNA MGP_NODShiLtJ_T0077117.1 MGP_NODShiLtJ_G0030526.1 mouse_genomes_project 6 54186431 54208323 - MGP_NODShiLtJ_P0077117 Tra2a protein_coding protein_coding MGP_NODShiLtJ_T0077118.1 MGP_NODShiLtJ_G0030526.1 mouse_genomes_project 6 54186431 54208324 - MGP_NODShiLtJ_P0077118 Tra2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077119.1 MGP_NODShiLtJ_G0030526.1 mouse_genomes_project 6 54186435 54208346 - Tra2a protein_coding retained_intron MGP_NODShiLtJ_T0077120.1 MGP_NODShiLtJ_G0030526.1 mouse_genomes_project 6 54186435 54208343 - MGP_NODShiLtJ_P0077120 Tra2a protein_coding protein_coding MGP_NODShiLtJ_T0077121.1 MGP_NODShiLtJ_G0030526.1 mouse_genomes_project 6 54204556 54208343 - Tra2a protein_coding retained_intron MGP_NODShiLtJ_T0000218.1 MGP_NODShiLtJ_G0000158.1 mouse_genomes_project 6 79401949 79402248 + MGP_NODShiLtJ_P0000218 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0099450.1 MGP_NODShiLtJ_G0037844.1 mouse_genomes_project 6 126927983 126928086 + Gm27944 snRNA snRNA MGP_NODShiLtJ_T0080236.1 MGP_NODShiLtJ_G0031221.1 mouse_genomes_project 6 152363595 152381583 + MGP_NODShiLtJ_P0080236 Cdkn1b protein_coding protein_coding MGP_NODShiLtJ_T0080237.1 MGP_NODShiLtJ_G0031221.1 mouse_genomes_project 6 152363595 152381583 + MGP_NODShiLtJ_P0080237 Cdkn1b protein_coding protein_coding MGP_NODShiLtJ_T0080238.1 MGP_NODShiLtJ_G0031221.1 mouse_genomes_project 6 152363708 152381583 + MGP_NODShiLtJ_P0080238 Cdkn1b protein_coding protein_coding MGP_NODShiLtJ_T0008532.1 MGP_NODShiLtJ_G0006888.1 mouse_genomes_project 6 58513111 58518313 + Gm4872 lincRNA lincRNA MGP_NODShiLtJ_T0076747.1 MGP_NODShiLtJ_G0030411.1 mouse_genomes_project 6 43023870 43034084 - MGP_NODShiLtJ_P0076747 Mrps33 protein_coding protein_coding MGP_NODShiLtJ_T0076748.1 MGP_NODShiLtJ_G0030411.1 mouse_genomes_project 6 43024258 43033981 - MGP_NODShiLtJ_P0076748 Mrps33 protein_coding protein_coding MGP_NODShiLtJ_T0076749.1 MGP_NODShiLtJ_G0030411.1 mouse_genomes_project 6 43024450 43028122 - MGP_NODShiLtJ_P0076749 Mrps33 protein_coding protein_coding MGP_NODShiLtJ_T0076750.1 MGP_NODShiLtJ_G0030411.1 mouse_genomes_project 6 43027321 43033989 - Mrps33 protein_coding retained_intron MGP_NODShiLtJ_T0010667.1 MGP_NODShiLtJ_G0008800.1 mouse_genomes_project 6 61673634 61673738 - Gm44413 miRNA miRNA MGP_NODShiLtJ_T0011536.1 MGP_NODShiLtJ_G0009669.1 mouse_genomes_project 6 57452668 57452855 + Gm27492 misc_RNA misc_RNA MGP_NODShiLtJ_T0011547.1 MGP_NODShiLtJ_G0009680.1 mouse_genomes_project 6 94765477 94765664 + Gm27772 misc_RNA misc_RNA MGP_NODShiLtJ_T0011556.1 MGP_NODShiLtJ_G0009689.1 mouse_genomes_project 6 126378350 126378665 + Gm26362 misc_RNA misc_RNA MGP_NODShiLtJ_T0080777.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168098371 168130614 - MGP_NODShiLtJ_P0080777 Amn1 protein_coding protein_coding MGP_NODShiLtJ_T0080778.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168098491 168115284 - Amn1 protein_coding retained_intron MGP_NODShiLtJ_T0080779.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168098801 168130566 - Amn1 protein_coding processed_transcript MGP_NODShiLtJ_T0080780.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168098802 168130587 - MGP_NODShiLtJ_P0080780 Amn1 protein_coding protein_coding MGP_NODShiLtJ_T0080781.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168098807 168125394 - Amn1 protein_coding processed_transcript MGP_NODShiLtJ_T0080782.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168098823 168125391 - MGP_NODShiLtJ_P0080782 Amn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080783.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168109179 168130583 - Amn1 protein_coding processed_transcript MGP_NODShiLtJ_T0080784.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168111208 168130572 - Amn1 protein_coding retained_intron MGP_NODShiLtJ_T0080785.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168111374 168130597 - Amn1 protein_coding processed_transcript MGP_NODShiLtJ_T0080786.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168112786 168130589 - MGP_NODShiLtJ_P0080786 Amn1 protein_coding protein_coding MGP_NODShiLtJ_T0080787.1 MGP_NODShiLtJ_G0031321.1 mouse_genomes_project 6 168114774 168130604 - Amn1 protein_coding retained_intron MGP_NODShiLtJ_T0018132.1 MGP_NODShiLtJ_G0015505.1 mouse_genomes_project 6 75229023 75280785 + A430010J10Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018133.1 MGP_NODShiLtJ_G0015505.1 mouse_genomes_project 6 75229027 75230303 + A430010J10Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018134.1 MGP_NODShiLtJ_G0015505.1 mouse_genomes_project 6 75277280 75280464 + A430010J10Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018135.1 MGP_NODShiLtJ_G0015505.1 mouse_genomes_project 6 75277551 75277917 + A430010J10Rik processed_transcript pseudogene MGP_NODShiLtJ_T0079606.1 MGP_NODShiLtJ_G0031054.1 mouse_genomes_project 6 139844584 139890454 - MGP_NODShiLtJ_P0079606 protein_coding protein_coding MGP_NODShiLtJ_T0005567.1 MGP_NODShiLtJ_G0004685.1 mouse_genomes_project 6 99097405 99104310 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0005568.1 MGP_NODShiLtJ_G0004685.1 mouse_genomes_project 6 99097453 99106048 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0005569.1 MGP_NODShiLtJ_G0004685.1 mouse_genomes_project 6 99097453 99105261 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0008549.1 MGP_NODShiLtJ_G0006903.1 mouse_genomes_project 6 79446289 79467609 + Gm43291 lincRNA lincRNA MGP_NODShiLtJ_T0002014.1 MGP_NODShiLtJ_G0001926.1 mouse_genomes_project 6 98713261 98714043 - TEC TEC MGP_NODShiLtJ_T0008515.1 MGP_NODShiLtJ_G0006876.1 mouse_genomes_project 6 55891105 55895065 - Gm44109 lincRNA lincRNA MGP_NODShiLtJ_T0015168.1 MGP_NODShiLtJ_G0013276.1 mouse_genomes_project 6 32152929 32154082 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100671.1 MGP_NODShiLtJ_G0039065.1 mouse_genomes_project 6 62105565 62105697 - Gm24709 snoRNA snoRNA MGP_NODShiLtJ_T0000319.1 MGP_NODShiLtJ_G0000257.1 mouse_genomes_project 6 79008092 79008661 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000182.1 MGP_NODShiLtJ_G0000132.1 mouse_genomes_project 6 77234458 77234989 - MGP_NODShiLtJ_P0000182 Igkv4-91 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0080452.1 MGP_NODShiLtJ_G0031264.1 mouse_genomes_project 6 159880881 159930922 + MGP_NODShiLtJ_P0080452 Slco1c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080453.1 MGP_NODShiLtJ_G0031264.1 mouse_genomes_project 6 159880899 159930938 + MGP_NODShiLtJ_P0080453 Slco1c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080454.1 MGP_NODShiLtJ_G0031264.1 mouse_genomes_project 6 159881048 159931339 + MGP_NODShiLtJ_P0080454 Slco1c1 protein_coding protein_coding MGP_NODShiLtJ_T0080455.1 MGP_NODShiLtJ_G0031264.1 mouse_genomes_project 6 159891369 159932211 + MGP_NODShiLtJ_P0080455 Slco1c1 protein_coding protein_coding MGP_NODShiLtJ_T0080456.1 MGP_NODShiLtJ_G0031264.1 mouse_genomes_project 6 159906091 159909022 + Slco1c1 protein_coding retained_intron MGP_NODShiLtJ_T0076822.1 MGP_NODShiLtJ_G0030443.1 mouse_genomes_project 6 45355681 45368539 + MGP_NODShiLtJ_P0076822 Sval2 protein_coding protein_coding MGP_NODShiLtJ_T0076823.1 MGP_NODShiLtJ_G0030443.1 mouse_genomes_project 6 45363407 45368498 + MGP_NODShiLtJ_P0076823 Sval2 protein_coding protein_coding MGP_NODShiLtJ_T0076824.1 MGP_NODShiLtJ_G0030443.1 mouse_genomes_project 6 45364960 45368498 + MGP_NODShiLtJ_P0076824 Sval2 protein_coding protein_coding MGP_NODShiLtJ_T0076825.1 MGP_NODShiLtJ_G0030443.1 mouse_genomes_project 6 45367465 45368415 + Sval2 protein_coding retained_intron MGP_NODShiLtJ_T0015501.1 MGP_NODShiLtJ_G0013609.1 mouse_genomes_project 6 149446981 149447414 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099461.1 MGP_NODShiLtJ_G0037855.1 mouse_genomes_project 6 141765751 141765861 + Gm24947 snRNA snRNA MGP_NODShiLtJ_T0001999.1 MGP_NODShiLtJ_G0001911.1 mouse_genomes_project 6 94459902 94464561 - TEC TEC MGP_NODShiLtJ_T0079201.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130982456 131068218 + MGP_NODShiLtJ_P0079201 protein_coding protein_coding MGP_NODShiLtJ_T0079202.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130982458 131068221 + MGP_NODShiLtJ_P0079202 protein_coding protein_coding MGP_NODShiLtJ_T0079203.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130982465 131068218 + MGP_NODShiLtJ_P0079203 protein_coding protein_coding MGP_NODShiLtJ_T0079204.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130982476 131064430 + MGP_NODShiLtJ_P0079204 protein_coding protein_coding MGP_NODShiLtJ_T0079205.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130982485 131064418 + MGP_NODShiLtJ_P0079205 protein_coding protein_coding MGP_NODShiLtJ_T0079206.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130982496 131034655 + MGP_NODShiLtJ_P0079206 protein_coding protein_coding MGP_NODShiLtJ_T0079207.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130998835 131003336 + protein_coding retained_intron MGP_NODShiLtJ_T0079208.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130999320 131061985 + MGP_NODShiLtJ_P0079208 protein_coding protein_coding MGP_NODShiLtJ_T0079209.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 130999361 131034716 + MGP_NODShiLtJ_P0079209 protein_coding protein_coding MGP_NODShiLtJ_T0079210.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 131034545 131059988 + protein_coding retained_intron MGP_NODShiLtJ_T0079211.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 131043969 131064901 + MGP_NODShiLtJ_P0079211 protein_coding protein_coding MGP_NODShiLtJ_T0079212.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 131043995 131064811 + protein_coding retained_intron MGP_NODShiLtJ_T0079213.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 131051079 131060414 + protein_coding processed_transcript MGP_NODShiLtJ_T0079214.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 131061548 131064459 + protein_coding processed_transcript MGP_NODShiLtJ_T0079215.1 MGP_NODShiLtJ_G0030974.1 mouse_genomes_project 6 131063853 131064982 + protein_coding processed_transcript MGP_NODShiLtJ_T0078310.1 MGP_NODShiLtJ_G0030804.1 mouse_genomes_project 6 99225714 99273598 - MGP_NODShiLtJ_P0078310 Gm45140 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078314.1 MGP_NODShiLtJ_G0030804.1 mouse_genomes_project 6 99229208 99258587 - MGP_NODShiLtJ_P0078314 Gm45140 protein_coding protein_coding MGP_NODShiLtJ_T0015148.1 MGP_NODShiLtJ_G0013256.1 mouse_genomes_project 6 18422821 18423329 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098064.1 MGP_NODShiLtJ_G0036476.1 mouse_genomes_project 6 98672902 98673014 + n-R5s164 rRNA rRNA MGP_NODShiLtJ_T0002633.1 MGP_NODShiLtJ_G0002515.1 mouse_genomes_project 6 44480802 44481241 + MGP_NODShiLtJ_P0002633 Trbv13-3 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0078325.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99280400 99288898 - MGP_NODShiLtJ_P0078325 Cnbp protein_coding protein_coding MGP_NODShiLtJ_T0078326.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99280400 99288898 - MGP_NODShiLtJ_P0078326 Cnbp protein_coding protein_coding MGP_NODShiLtJ_T0078327.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99280867 99288872 - MGP_NODShiLtJ_P0078327 Cnbp protein_coding protein_coding MGP_NODShiLtJ_T0078328.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99280867 99288822 - MGP_NODShiLtJ_P0078328 Cnbp protein_coding protein_coding MGP_NODShiLtJ_T0078329.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99281672 99288852 - MGP_NODShiLtJ_P0078329 Cnbp protein_coding protein_coding MGP_NODShiLtJ_T0078330.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99281704 99288819 - Cnbp protein_coding retained_intron MGP_NODShiLtJ_T0078331.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99281724 99288814 - Cnbp protein_coding retained_intron MGP_NODShiLtJ_T0078332.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99281785 99288851 - Cnbp protein_coding retained_intron MGP_NODShiLtJ_T0078333.1 MGP_NODShiLtJ_G0030806.1 mouse_genomes_project 6 99283315 99284103 - Cnbp protein_coding retained_intron MGP_NODShiLtJ_T0076512.1 MGP_NODShiLtJ_G0030365.1 mouse_genomes_project 6 36873390 36888803 + MGP_NODShiLtJ_P0076512 Akr1b8 protein_coding protein_coding MGP_NODShiLtJ_T0076513.1 MGP_NODShiLtJ_G0030365.1 mouse_genomes_project 6 36875386 36885579 + Akr1b8 protein_coding processed_transcript MGP_NODShiLtJ_T0004865.1 MGP_NODShiLtJ_G0004174.1 mouse_genomes_project 6 34658703 34671450 + Plxna4os3 antisense antisense MGP_NODShiLtJ_T0004866.1 MGP_NODShiLtJ_G0004174.1 mouse_genomes_project 6 34658787 34671442 + Plxna4os3 antisense antisense MGP_NODShiLtJ_T0008656.1 MGP_NODShiLtJ_G0006991.1 mouse_genomes_project 6 143929994 143933700 - Gm42810 lincRNA lincRNA MGP_NODShiLtJ_T0008437.1 MGP_NODShiLtJ_G0006824.1 mouse_genomes_project 6 10916889 10974129 + lincRNA lincRNA MGP_NODShiLtJ_T0100659.1 MGP_NODShiLtJ_G0039053.1 mouse_genomes_project 6 31349960 31350091 + Gm26021 snoRNA snoRNA MGP_NODShiLtJ_T0015292.1 MGP_NODShiLtJ_G0013400.1 mouse_genomes_project 6 75347875 75348300 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102045.1 MGP_NODShiLtJ_G0040212.1 mouse_genomes_project 6 150038439 150039368 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0079404.1 MGP_NODShiLtJ_G0031005.1 mouse_genomes_project 6 135238358 135278306 - B4galnt3 protein_coding processed_transcript MGP_NODShiLtJ_T0079405.1 MGP_NODShiLtJ_G0031005.1 mouse_genomes_project 6 135238379 135334299 - MGP_NODShiLtJ_P0079405 B4galnt3 protein_coding protein_coding MGP_NODShiLtJ_T0080422.1 MGP_NODShiLtJ_G0031259.1 mouse_genomes_project 6 158215557 158216464 + Capza3 protein_coding processed_transcript MGP_NODShiLtJ_T0080423.1 MGP_NODShiLtJ_G0031259.1 mouse_genomes_project 6 158215862 158217084 + MGP_NODShiLtJ_P0080423 Capza3 protein_coding protein_coding MGP_NODShiLtJ_T0000287.1 MGP_NODShiLtJ_G0000225.1 mouse_genomes_project 6 76533672 76534054 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0080129.1 MGP_NODShiLtJ_G0031172.1 mouse_genomes_project 6 146475280 146484829 - protein_coding retained_intron MGP_NODShiLtJ_T0078762.1 MGP_NODShiLtJ_G0030894.1 mouse_genomes_project 6 113134103 113245706 + MGP_NODShiLtJ_P0078762 Gxylt2 protein_coding protein_coding MGP_NODShiLtJ_T0078763.1 MGP_NODShiLtJ_G0030894.1 mouse_genomes_project 6 113134124 113137044 + Gxylt2 protein_coding processed_transcript MGP_NODShiLtJ_T0002687.1 MGP_NODShiLtJ_G0002560.1 mouse_genomes_project 6 44457506 44457766 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0005563.1 MGP_NODShiLtJ_G0004683.1 mouse_genomes_project 6 67823648 67825878 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0005564.1 MGP_NODShiLtJ_G0004683.1 mouse_genomes_project 6 67825335 67831613 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0005565.1 MGP_NODShiLtJ_G0004683.1 mouse_genomes_project 6 67827363 67832153 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0075865.1 MGP_NODShiLtJ_G0030241.1 mouse_genomes_project 6 2249158 2289262 - MGP_NODShiLtJ_P0075865 Pon3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075866.1 MGP_NODShiLtJ_G0030241.1 mouse_genomes_project 6 2249158 2289315 - MGP_NODShiLtJ_P0075866 Pon3 protein_coding protein_coding MGP_NODShiLtJ_T0075867.1 MGP_NODShiLtJ_G0030241.1 mouse_genomes_project 6 2259926 2289264 - MGP_NODShiLtJ_P0075867 Pon3 protein_coding protein_coding MGP_NODShiLtJ_T0075868.1 MGP_NODShiLtJ_G0030241.1 mouse_genomes_project 6 2267265 2289243 - Pon3 protein_coding retained_intron MGP_NODShiLtJ_T0075869.1 MGP_NODShiLtJ_G0030241.1 mouse_genomes_project 6 2267708 2287895 - Pon3 protein_coding retained_intron MGP_NODShiLtJ_T0075870.1 MGP_NODShiLtJ_G0030241.1 mouse_genomes_project 6 2287608 2288596 - Pon3 protein_coding processed_transcript MGP_NODShiLtJ_T0075931.1 MGP_NODShiLtJ_G0030259.1 mouse_genomes_project 6 5837668 5953540 + MGP_NODShiLtJ_P0075931 Glcci1 protein_coding protein_coding MGP_NODShiLtJ_T0075932.1 MGP_NODShiLtJ_G0030259.1 mouse_genomes_project 6 5839005 5932517 + MGP_NODShiLtJ_P0075932 Glcci1 protein_coding protein_coding MGP_NODShiLtJ_T0075933.1 MGP_NODShiLtJ_G0030259.1 mouse_genomes_project 6 5853408 5949613 + MGP_NODShiLtJ_P0075933 Glcci1 protein_coding protein_coding MGP_NODShiLtJ_T0075934.1 MGP_NODShiLtJ_G0030259.1 mouse_genomes_project 6 5883044 5950061 + MGP_NODShiLtJ_P0075934 Glcci1 protein_coding protein_coding MGP_NODShiLtJ_T0075935.1 MGP_NODShiLtJ_G0030259.1 mouse_genomes_project 6 5932574 5947622 + Glcci1 protein_coding processed_transcript MGP_NODShiLtJ_T0015130.1 MGP_NODShiLtJ_G0013238.1 mouse_genomes_project 6 8717733 8723907 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015142.1 MGP_NODShiLtJ_G0013250.1 mouse_genomes_project 6 15347292 15347904 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004879.1 MGP_NODShiLtJ_G0004186.1 mouse_genomes_project 6 42596111 42597127 + Gm10244 antisense antisense MGP_NODShiLtJ_T0004880.1 MGP_NODShiLtJ_G0004186.1 mouse_genomes_project 6 42596602 42597519 + Gm10244 antisense antisense MGP_NODShiLtJ_T0079962.1 MGP_NODShiLtJ_G0031125.1 mouse_genomes_project 6 144027573 144108994 - MGP_NODShiLtJ_P0079962 Tspan9 protein_coding protein_coding MGP_NODShiLtJ_T0079963.1 MGP_NODShiLtJ_G0031125.1 mouse_genomes_project 6 144031424 144032986 - Tspan9 protein_coding retained_intron MGP_NODShiLtJ_T0079964.1 MGP_NODShiLtJ_G0031125.1 mouse_genomes_project 6 144031930 144109498 - MGP_NODShiLtJ_P0079964 Tspan9 protein_coding protein_coding MGP_NODShiLtJ_T0079965.1 MGP_NODShiLtJ_G0031125.1 mouse_genomes_project 6 144032599 144227639 - MGP_NODShiLtJ_P0079965 Tspan9 protein_coding protein_coding MGP_NODShiLtJ_T0079966.1 MGP_NODShiLtJ_G0031125.1 mouse_genomes_project 6 144032605 144224819 - MGP_NODShiLtJ_P0079966 Tspan9 protein_coding protein_coding MGP_NODShiLtJ_T0079967.1 MGP_NODShiLtJ_G0031125.1 mouse_genomes_project 6 144033249 144227632 - MGP_NODShiLtJ_P0079967 Tspan9 protein_coding protein_coding MGP_NODShiLtJ_T0079968.1 MGP_NODShiLtJ_G0031125.1 mouse_genomes_project 6 144033334 144206964 - MGP_NODShiLtJ_P0079968 Tspan9 protein_coding protein_coding MGP_NODShiLtJ_T0079969.1 MGP_NODShiLtJ_G0031125.1 mouse_genomes_project 6 144158412 144227673 - Tspan9 protein_coding processed_transcript MGP_NODShiLtJ_T0015144.1 MGP_NODShiLtJ_G0013252.1 mouse_genomes_project 6 17125834 17127083 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076240.1 MGP_NODShiLtJ_G0030322.1 mouse_genomes_project 6 31230332 31273346 - MGP_NODShiLtJ_P0076240 Rbm28 protein_coding protein_coding MGP_NODShiLtJ_T0076241.1 MGP_NODShiLtJ_G0030322.1 mouse_genomes_project 6 31231999 31262966 - Rbm28 protein_coding retained_intron MGP_NODShiLtJ_T0076242.1 MGP_NODShiLtJ_G0030322.1 mouse_genomes_project 6 31232033 31238214 - MGP_NODShiLtJ_P0076242 Rbm28 protein_coding protein_coding MGP_NODShiLtJ_T0076243.1 MGP_NODShiLtJ_G0030322.1 mouse_genomes_project 6 31234589 31273346 - MGP_NODShiLtJ_P0076243 Rbm28 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0076244.1 MGP_NODShiLtJ_G0030322.1 mouse_genomes_project 6 31244338 31260725 - Rbm28 protein_coding retained_intron MGP_NODShiLtJ_T0076245.1 MGP_NODShiLtJ_G0030322.1 mouse_genomes_project 6 31264554 31268081 - Rbm28 protein_coding retained_intron MGP_NODShiLtJ_T0076246.1 MGP_NODShiLtJ_G0030322.1 mouse_genomes_project 6 31265014 31267856 - Rbm28 protein_coding retained_intron MGP_NODShiLtJ_T0002514.1 MGP_NODShiLtJ_G0002416.1 mouse_genomes_project 6 44994328 44994379 + MGP_NODShiLtJ_P0002514 Trbj1-4 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0015244.1 MGP_NODShiLtJ_G0013352.1 mouse_genomes_project 6 63973579 63973838 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001986.1 MGP_NODShiLtJ_G0001898.1 mouse_genomes_project 6 90630907 90634923 + TEC TEC MGP_NODShiLtJ_T0100709.1 MGP_NODShiLtJ_G0039103.1 mouse_genomes_project 6 139260032 139260159 - Gm22724 snoRNA snoRNA MGP_NODShiLtJ_T0076684.1 MGP_NODShiLtJ_G0030398.1 mouse_genomes_project 6 41777020 41801829 + MGP_NODShiLtJ_P0076684 Clec2l protein_coding protein_coding MGP_NODShiLtJ_T0076926.1 MGP_NODShiLtJ_G0030484.1 mouse_genomes_project 6 47049595 47408962 - MGP_NODShiLtJ_P0076926 Tpk1 protein_coding protein_coding MGP_NODShiLtJ_T0076927.1 MGP_NODShiLtJ_G0030484.1 mouse_genomes_project 6 47049667 47372707 - Tpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0076928.1 MGP_NODShiLtJ_G0030484.1 mouse_genomes_project 6 47049868 47408859 - MGP_NODShiLtJ_P0076928 Tpk1 protein_coding protein_coding MGP_NODShiLtJ_T0076929.1 MGP_NODShiLtJ_G0030484.1 mouse_genomes_project 6 47051436 47199934 - Tpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0076930.1 MGP_NODShiLtJ_G0030484.1 mouse_genomes_project 6 47330385 47408903 - Tpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0076931.1 MGP_NODShiLtJ_G0030484.1 mouse_genomes_project 6 47332745 47408565 - Tpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0011532.1 MGP_NODShiLtJ_G0009665.1 mouse_genomes_project 6 57365769 57365983 + Gm27861 misc_RNA misc_RNA MGP_NODShiLtJ_T0015476.1 MGP_NODShiLtJ_G0013584.1 mouse_genomes_project 6 143441789 143442411 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078487.1 MGP_NODShiLtJ_G0030840.1 mouse_genomes_project 6 101871934 101876161 + MGP_NODShiLtJ_P0078487 BC048671 protein_coding protein_coding MGP_NODShiLtJ_T0078488.1 MGP_NODShiLtJ_G0030840.1 mouse_genomes_project 6 101872831 101876161 + MGP_NODShiLtJ_P0078488 BC048671 protein_coding protein_coding MGP_NODShiLtJ_T0077102.1 MGP_NODShiLtJ_G0030523.1 mouse_genomes_project 6 53958313 53960145 + Gpnmb protein_coding retained_intron MGP_NODShiLtJ_T0077103.1 MGP_NODShiLtJ_G0030523.1 mouse_genomes_project 6 53958382 53979974 + MGP_NODShiLtJ_P0077103 Gpnmb protein_coding protein_coding MGP_NODShiLtJ_T0077104.1 MGP_NODShiLtJ_G0030523.1 mouse_genomes_project 6 53958432 53964700 + MGP_NODShiLtJ_P0077104 Gpnmb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077105.1 MGP_NODShiLtJ_G0030523.1 mouse_genomes_project 6 53958444 53992703 + MGP_NODShiLtJ_P0077105 Gpnmb protein_coding protein_coding MGP_NODShiLtJ_T0077106.1 MGP_NODShiLtJ_G0030523.1 mouse_genomes_project 6 53969215 53970143 + Gpnmb protein_coding retained_intron MGP_NODShiLtJ_T0101982.1 MGP_NODShiLtJ_G0040150.1 mouse_genomes_project 6 44818846 44819199 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0077394.1 MGP_NODShiLtJ_G0030590.1 mouse_genomes_project 6 62578493 62579557 + MGP_NODShiLtJ_P0077394 Vmn1r6 protein_coding protein_coding MGP_NODShiLtJ_T0097822.1 MGP_NODShiLtJ_G0036234.1 mouse_genomes_project 6 79005490 79005720 + pseudogene pseudogene MGP_NODShiLtJ_T0002068.1 MGP_NODShiLtJ_G0001980.1 mouse_genomes_project 6 116541987 116545464 + TEC TEC MGP_NODShiLtJ_T0102012.1 MGP_NODShiLtJ_G0040180.1 mouse_genomes_project 6 79206732 79206880 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010668.1 MGP_NODShiLtJ_G0008801.1 mouse_genomes_project 6 78720236 78720346 - Gm23694 miRNA miRNA MGP_NODShiLtJ_T0015401.1 MGP_NODShiLtJ_G0013509.1 mouse_genomes_project 6 121028573 121028799 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015273.1 MGP_NODShiLtJ_G0013381.1 mouse_genomes_project 6 73159669 73159960 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015169.1 MGP_NODShiLtJ_G0013277.1 mouse_genomes_project 6 32155578 32155785 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008512.1 MGP_NODShiLtJ_G0006874.1 mouse_genomes_project 6 55078661 55137808 + Gm3455 lincRNA lincRNA MGP_NODShiLtJ_T0079877.1 MGP_NODShiLtJ_G0031104.1 mouse_genomes_project 6 141193237 141211597 - MGP_NODShiLtJ_P0079877 Plekhg6 protein_coding protein_coding MGP_NODShiLtJ_T0076230.1 MGP_NODShiLtJ_G0030320.1 mouse_genomes_project 6 30728307 30907007 - MGP_NODShiLtJ_P0076230 Lrrc4 protein_coding protein_coding MGP_NODShiLtJ_T0076235.1 MGP_NODShiLtJ_G0030320.1 mouse_genomes_project 6 30904794 30908409 - MGP_NODShiLtJ_P0076235 Lrrc4 protein_coding protein_coding MGP_NODShiLtJ_T0099442.1 MGP_NODShiLtJ_G0037836.1 mouse_genomes_project 6 108544332 108544429 - Gm22971 snRNA snRNA MGP_NODShiLtJ_T0001880.1 MGP_NODShiLtJ_G0001792.1 mouse_genomes_project 6 11334239 11335185 + TEC TEC MGP_NODShiLtJ_T0015246.1 MGP_NODShiLtJ_G0013354.1 mouse_genomes_project 6 64425606 64425770 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000284.1 MGP_NODShiLtJ_G0000222.1 mouse_genomes_project 6 76115287 76115753 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0015429.1 MGP_NODShiLtJ_G0013537.1 mouse_genomes_project 6 130379426 130379834 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000294.1 MGP_NODShiLtJ_G0000232.1 mouse_genomes_project 6 76762824 76763558 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0005032.1 MGP_NODShiLtJ_G0004291.1 mouse_genomes_project 6 143117816 143120982 + Gm43126 antisense antisense MGP_NODShiLtJ_T0015187.1 MGP_NODShiLtJ_G0013295.1 mouse_genomes_project 6 43787061 43787473 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008580.1 MGP_NODShiLtJ_G0006928.1 mouse_genomes_project 6 97857137 97859503 - Gm44386 lincRNA lincRNA MGP_NODShiLtJ_T0080681.1 MGP_NODShiLtJ_G0031306.1 mouse_genomes_project 6 165707347 165711440 - MGP_NODShiLtJ_P0080681 1700034J05Rik protein_coding protein_coding MGP_NODShiLtJ_T0080682.1 MGP_NODShiLtJ_G0031306.1 mouse_genomes_project 6 165708318 165711432 - MGP_NODShiLtJ_P0080682 1700034J05Rik protein_coding protein_coding MGP_NODShiLtJ_T0015335.1 MGP_NODShiLtJ_G0013443.1 mouse_genomes_project 6 93987026 93987783 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015280.1 MGP_NODShiLtJ_G0013388.1 mouse_genomes_project 6 73956449 73958025 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077436.1 MGP_NODShiLtJ_G0030615.1 mouse_genomes_project 6 63753907 63754960 - MGP_NODShiLtJ_P0077436 Vmn1r25 protein_coding protein_coding MGP_NODShiLtJ_T0011539.1 MGP_NODShiLtJ_G0009672.1 mouse_genomes_project 6 57454600 57454804 + Gm27454 misc_RNA misc_RNA MGP_NODShiLtJ_T0076292.1 MGP_NODShiLtJ_G0030331.1 mouse_genomes_project 6 31572881 31579594 + Flnc protein_coding retained_intron MGP_NODShiLtJ_T0076293.1 MGP_NODShiLtJ_G0030331.1 mouse_genomes_project 6 31572901 31602627 + MGP_NODShiLtJ_P0076293 Flnc protein_coding protein_coding MGP_NODShiLtJ_T0076294.1 MGP_NODShiLtJ_G0030331.1 mouse_genomes_project 6 31572901 31602627 + MGP_NODShiLtJ_P0076294 Flnc protein_coding protein_coding MGP_NODShiLtJ_T0079428.1 MGP_NODShiLtJ_G0031010.1 mouse_genomes_project 6 135545065 135549934 - MGP_NODShiLtJ_P0079428 Cecr6 protein_coding protein_coding MGP_NODShiLtJ_T0078479.1 MGP_NODShiLtJ_G0030835.1 mouse_genomes_project 6 101588366 101589299 - MGP_NODShiLtJ_P0078479 Vmn1r49 protein_coding protein_coding MGP_NODShiLtJ_T0078480.1 MGP_NODShiLtJ_G0030835.1 mouse_genomes_project 6 101588366 101594741 - MGP_NODShiLtJ_P0078480 Vmn1r49 protein_coding protein_coding MGP_NODShiLtJ_T0015444.1 MGP_NODShiLtJ_G0013552.1 mouse_genomes_project 6 136674256 136674581 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001901.1 MGP_NODShiLtJ_G0001813.1 mouse_genomes_project 6 32387079 32389301 + TEC TEC MGP_NODShiLtJ_T0099441.1 MGP_NODShiLtJ_G0037835.1 mouse_genomes_project 6 107047964 107048071 - Gm26501 snRNA snRNA MGP_NODShiLtJ_T0080304.1 MGP_NODShiLtJ_G0031237.1 mouse_genomes_project 6 154430399 154432232 + MGP_NODShiLtJ_P0080304 H2afj protein_coding protein_coding MGP_NODShiLtJ_T0080305.1 MGP_NODShiLtJ_G0031237.1 mouse_genomes_project 6 154430488 154431946 + MGP_NODShiLtJ_P0080305 H2afj protein_coding protein_coding MGP_NODShiLtJ_T0010663.1 MGP_NODShiLtJ_G0008796.1 mouse_genomes_project 6 56395255 56395354 - Mir148a miRNA miRNA MGP_NODShiLtJ_T0004871.1 MGP_NODShiLtJ_G0004179.1 mouse_genomes_project 6 36803182 36840484 + Gm14546 antisense antisense MGP_NODShiLtJ_T0097818.1 MGP_NODShiLtJ_G0036230.1 mouse_genomes_project 6 3904705 3905884 - pseudogene pseudogene MGP_NODShiLtJ_T0080655.1 MGP_NODShiLtJ_G0031300.1 mouse_genomes_project 6 165359219 165392001 - MGP_NODShiLtJ_P0080655 Tm7sf3 protein_coding protein_coding MGP_NODShiLtJ_T0080656.1 MGP_NODShiLtJ_G0031300.1 mouse_genomes_project 6 165367758 165391902 - MGP_NODShiLtJ_P0080656 Tm7sf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080657.1 MGP_NODShiLtJ_G0031300.1 mouse_genomes_project 6 165377845 165399901 - Tm7sf3 protein_coding processed_transcript MGP_NODShiLtJ_T0080658.1 MGP_NODShiLtJ_G0031300.1 mouse_genomes_project 6 165379856 165399911 - Tm7sf3 protein_coding processed_transcript MGP_NODShiLtJ_T0015306.1 MGP_NODShiLtJ_G0013414.1 mouse_genomes_project 6 76619790 76621300 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076923.1 MGP_NODShiLtJ_G0030483.1 mouse_genomes_project 6 47004624 47010505 - MGP_NODShiLtJ_P0076923 Nobox protein_coding protein_coding MGP_NODShiLtJ_T0076924.1 MGP_NODShiLtJ_G0030483.1 mouse_genomes_project 6 47004650 47006086 - Nobox protein_coding processed_transcript MGP_NODShiLtJ_T0076925.1 MGP_NODShiLtJ_G0030483.1 mouse_genomes_project 6 47004848 47008187 - MGP_NODShiLtJ_P0076925 Nobox protein_coding protein_coding MGP_NODShiLtJ_T0079287.1 MGP_NODShiLtJ_G0030991.1 mouse_genomes_project 6 133291635 133318886 - MGP_NODShiLtJ_P0079287 Zfp248 protein_coding protein_coding MGP_NODShiLtJ_T0079288.1 MGP_NODShiLtJ_G0030991.1 mouse_genomes_project 6 133297450 133319198 - Zfp248 protein_coding processed_transcript MGP_NODShiLtJ_T0079289.1 MGP_NODShiLtJ_G0030991.1 mouse_genomes_project 6 133297528 133318844 - MGP_NODShiLtJ_P0079289 Zfp248 protein_coding protein_coding MGP_NODShiLtJ_T0079290.1 MGP_NODShiLtJ_G0030991.1 mouse_genomes_project 6 133316877 133319281 - Zfp248 protein_coding retained_intron MGP_NODShiLtJ_T0079291.1 MGP_NODShiLtJ_G0030991.1 mouse_genomes_project 6 133316910 133319250 - Zfp248 protein_coding retained_intron MGP_NODShiLtJ_T0079292.1 MGP_NODShiLtJ_G0030991.1 mouse_genomes_project 6 133316946 133318535 - Zfp248 protein_coding processed_transcript MGP_NODShiLtJ_T0015180.1 MGP_NODShiLtJ_G0013288.1 mouse_genomes_project 6 40855399 40856124 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015156.1 MGP_NODShiLtJ_G0013264.1 mouse_genomes_project 6 23278964 23279740 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010702.1 MGP_NODShiLtJ_G0008835.1 mouse_genomes_project 6 140491215 140491287 - Mir141 miRNA miRNA MGP_NODShiLtJ_T0078128.1 MGP_NODShiLtJ_G0030766.1 mouse_genomes_project 6 96850207 96935785 + MGP_NODShiLtJ_P0078128 Alms1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078129.1 MGP_NODShiLtJ_G0030766.1 mouse_genomes_project 6 96850239 96955349 + MGP_NODShiLtJ_P0078129 Alms1 protein_coding protein_coding MGP_NODShiLtJ_T0078130.1 MGP_NODShiLtJ_G0030766.1 mouse_genomes_project 6 96906906 96909635 + Alms1 protein_coding retained_intron MGP_NODShiLtJ_T0078131.1 MGP_NODShiLtJ_G0030766.1 mouse_genomes_project 6 96914173 96920529 + Alms1 protein_coding retained_intron MGP_NODShiLtJ_T0078132.1 MGP_NODShiLtJ_G0030766.1 mouse_genomes_project 6 96934479 96937518 + Alms1 protein_coding retained_intron MGP_NODShiLtJ_T0077765.1 MGP_NODShiLtJ_G0030692.1 mouse_genomes_project 6 81795567 81861891 - MGP_NODShiLtJ_P0077765 Kcmf1 protein_coding protein_coding MGP_NODShiLtJ_T0077766.1 MGP_NODShiLtJ_G0030692.1 mouse_genomes_project 6 81795683 81861965 - MGP_NODShiLtJ_P0077766 Kcmf1 protein_coding protein_coding MGP_NODShiLtJ_T0077767.1 MGP_NODShiLtJ_G0030692.1 mouse_genomes_project 6 81799067 81802111 - Kcmf1 protein_coding retained_intron MGP_NODShiLtJ_T0077768.1 MGP_NODShiLtJ_G0030692.1 mouse_genomes_project 6 81800933 81813088 - Kcmf1 protein_coding processed_transcript MGP_NODShiLtJ_T0102018.1 MGP_NODShiLtJ_G0040186.1 mouse_genomes_project 6 101335415 101336400 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102016.1 MGP_NODShiLtJ_G0040184.1 mouse_genomes_project 6 97686707 97687844 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0078856.1 MGP_NODShiLtJ_G0030916.1 mouse_genomes_project 6 127050519 127125887 - MGP_NODShiLtJ_P0078856 Rad18 protein_coding protein_coding MGP_NODShiLtJ_T0078857.1 MGP_NODShiLtJ_G0030916.1 mouse_genomes_project 6 127050614 127125805 - MGP_NODShiLtJ_P0078857 Rad18 protein_coding protein_coding MGP_NODShiLtJ_T0078858.1 MGP_NODShiLtJ_G0030916.1 mouse_genomes_project 6 127050642 127125812 - MGP_NODShiLtJ_P0078858 Rad18 protein_coding protein_coding MGP_NODShiLtJ_T0078859.1 MGP_NODShiLtJ_G0030916.1 mouse_genomes_project 6 127050644 127125871 - MGP_NODShiLtJ_P0078859 Rad18 protein_coding protein_coding MGP_NODShiLtJ_T0078860.1 MGP_NODShiLtJ_G0030916.1 mouse_genomes_project 6 127051500 127104186 - MGP_NODShiLtJ_P0078860 Rad18 protein_coding protein_coding MGP_NODShiLtJ_T0078861.1 MGP_NODShiLtJ_G0030916.1 mouse_genomes_project 6 127059347 127125849 - Rad18 protein_coding processed_transcript MGP_NODShiLtJ_T0078862.1 MGP_NODShiLtJ_G0030916.1 mouse_genomes_project 6 127078323 127125834 - MGP_NODShiLtJ_P0078862 Rad18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078863.1 MGP_NODShiLtJ_G0030916.1 mouse_genomes_project 6 127091384 127125845 - Rad18 protein_coding retained_intron MGP_NODShiLtJ_T0015378.1 MGP_NODShiLtJ_G0013486.1 mouse_genomes_project 6 109601099 109602841 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015469.1 MGP_NODShiLtJ_G0013577.1 mouse_genomes_project 6 142975206 142975936 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079857.1 MGP_NODShiLtJ_G0031099.1 mouse_genomes_project 6 141040635 141044996 - MGP_NODShiLtJ_P0079857 Cd27 protein_coding protein_coding MGP_NODShiLtJ_T0079858.1 MGP_NODShiLtJ_G0031099.1 mouse_genomes_project 6 141041136 141044980 - MGP_NODShiLtJ_P0079858 Cd27 protein_coding protein_coding MGP_NODShiLtJ_T0079859.1 MGP_NODShiLtJ_G0031099.1 mouse_genomes_project 6 141041207 141044939 - MGP_NODShiLtJ_P0079859 Cd27 protein_coding protein_coding MGP_NODShiLtJ_T0079860.1 MGP_NODShiLtJ_G0031099.1 mouse_genomes_project 6 141041541 141042800 - Cd27 protein_coding retained_intron MGP_NODShiLtJ_T0079861.1 MGP_NODShiLtJ_G0031099.1 mouse_genomes_project 6 141041677 141042660 - Cd27 protein_coding retained_intron MGP_NODShiLtJ_T0079862.1 MGP_NODShiLtJ_G0031099.1 mouse_genomes_project 6 141044094 141044989 - Cd27 protein_coding retained_intron MGP_NODShiLtJ_T0075798.1 MGP_NODShiLtJ_G0030229.1 mouse_genomes_project 6 262562 373063 + MGP_NODShiLtJ_P0075798 Vps50 protein_coding protein_coding MGP_NODShiLtJ_T0075799.1 MGP_NODShiLtJ_G0030229.1 mouse_genomes_project 6 262584 370642 + MGP_NODShiLtJ_P0075799 Vps50 protein_coding protein_coding MGP_NODShiLtJ_T0075800.1 MGP_NODShiLtJ_G0030229.1 mouse_genomes_project 6 262602 372847 + MGP_NODShiLtJ_P0075800 Vps50 protein_coding protein_coding MGP_NODShiLtJ_T0075801.1 MGP_NODShiLtJ_G0030229.1 mouse_genomes_project 6 262606 287648 + Vps50 protein_coding retained_intron MGP_NODShiLtJ_T0075802.1 MGP_NODShiLtJ_G0030229.1 mouse_genomes_project 6 328279 372847 + Vps50 protein_coding retained_intron MGP_NODShiLtJ_T0075803.1 MGP_NODShiLtJ_G0030229.1 mouse_genomes_project 6 341462 372847 + Vps50 protein_coding processed_transcript MGP_NODShiLtJ_T0075804.1 MGP_NODShiLtJ_G0030229.1 mouse_genomes_project 6 356623 361632 + Vps50 protein_coding retained_intron MGP_NODShiLtJ_T0075805.1 MGP_NODShiLtJ_G0030229.1 mouse_genomes_project 6 362592 369794 + Vps50 protein_coding processed_transcript MGP_NODShiLtJ_T0004885.1 MGP_NODShiLtJ_G0004191.1 mouse_genomes_project 6 45840376 45862568 - Gm44284 antisense antisense MGP_NODShiLtJ_T0099464.1 MGP_NODShiLtJ_G0037858.1 mouse_genomes_project 6 146538280 146538346 + Gm22555 snRNA snRNA MGP_NODShiLtJ_T0001946.1 MGP_NODShiLtJ_G0001858.1 mouse_genomes_project 6 58975982 58978187 + TEC TEC MGP_NODShiLtJ_T0076616.1 MGP_NODShiLtJ_G0030384.1 mouse_genomes_project 6 40226291 40364287 - MGP_NODShiLtJ_P0076616 Creb3l2 protein_coding protein_coding MGP_NODShiLtJ_T0076617.1 MGP_NODShiLtJ_G0030384.1 mouse_genomes_project 6 40234245 40239663 - Creb3l2 protein_coding processed_transcript MGP_NODShiLtJ_T0078906.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751668 127774791 + Cpne9 protein_coding retained_intron MGP_NODShiLtJ_T0078907.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751668 127774733 + MGP_NODShiLtJ_P0078907 Cpne9 protein_coding protein_coding MGP_NODShiLtJ_T0078908.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751671 127773990 + MGP_NODShiLtJ_P0078908 Cpne9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078909.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751696 127752791 + Cpne9 protein_coding retained_intron MGP_NODShiLtJ_T0078910.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751697 127754632 + Cpne9 protein_coding retained_intron MGP_NODShiLtJ_T0078911.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751700 127752869 + Cpne9 protein_coding retained_intron MGP_NODShiLtJ_T0078912.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751725 127753333 + Cpne9 protein_coding processed_transcript MGP_NODShiLtJ_T0078913.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751726 127753788 + Cpne9 protein_coding processed_transcript MGP_NODShiLtJ_T0078914.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127751835 127773787 + MGP_NODShiLtJ_P0078914 Cpne9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078915.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127757805 127774735 + Cpne9 protein_coding retained_intron MGP_NODShiLtJ_T0078916.1 MGP_NODShiLtJ_G0030922.1 mouse_genomes_project 6 127763591 127770858 + Cpne9 protein_coding processed_transcript MGP_NODShiLtJ_T0010694.1 MGP_NODShiLtJ_G0008827.1 mouse_genomes_project 6 131365820 131365890 - Mir7043 miRNA miRNA MGP_NODShiLtJ_T0076904.1 MGP_NODShiLtJ_G0030474.1 mouse_genomes_project 6 46562009 46564414 + MGP_NODShiLtJ_P0076904 Olfr444 protein_coding protein_coding MGP_NODShiLtJ_T0076308.1 MGP_NODShiLtJ_G0030335.1 mouse_genomes_project 6 31673344 31684038 + MGP_NODShiLtJ_P0076308 Irf5 protein_coding protein_coding MGP_NODShiLtJ_T0076309.1 MGP_NODShiLtJ_G0030335.1 mouse_genomes_project 6 31673427 31689235 + MGP_NODShiLtJ_P0076309 Irf5 protein_coding protein_coding MGP_NODShiLtJ_T0076310.1 MGP_NODShiLtJ_G0030335.1 mouse_genomes_project 6 31674989 31680716 + MGP_NODShiLtJ_P0076310 Irf5 protein_coding protein_coding MGP_NODShiLtJ_T0076311.1 MGP_NODShiLtJ_G0030335.1 mouse_genomes_project 6 31675999 31684038 + MGP_NODShiLtJ_P0076311 Irf5 protein_coding protein_coding MGP_NODShiLtJ_T0076312.1 MGP_NODShiLtJ_G0030335.1 mouse_genomes_project 6 31677966 31682065 + MGP_NODShiLtJ_P0076312 Irf5 protein_coding protein_coding MGP_NODShiLtJ_T0076316.1 MGP_NODShiLtJ_G0030335.1 mouse_genomes_project 6 31688510 31689222 + Irf5 protein_coding processed_transcript MGP_NODShiLtJ_T0008615.1 MGP_NODShiLtJ_G0006954.1 mouse_genomes_project 6 112942456 112948375 + 1700049E22Rik lincRNA lincRNA MGP_NODShiLtJ_T0099432.1 MGP_NODShiLtJ_G0037826.1 mouse_genomes_project 6 73817566 73817672 - Gm23543 snRNA snRNA MGP_NODShiLtJ_T0001972.1 MGP_NODShiLtJ_G0001884.1 mouse_genomes_project 6 81689261 81691859 - TEC TEC MGP_NODShiLtJ_T0015420.1 MGP_NODShiLtJ_G0013528.1 mouse_genomes_project 6 128053667 128053892 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015334.1 MGP_NODShiLtJ_G0013442.1 mouse_genomes_project 6 93945934 93946292 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100683.1 MGP_NODShiLtJ_G0039077.1 mouse_genomes_project 6 76933435 76933568 + Gm25833 snoRNA snoRNA MGP_NODShiLtJ_T0002117.1 MGP_NODShiLtJ_G0002029.1 mouse_genomes_project 6 154510684 154511188 - TEC TEC MGP_NODShiLtJ_T0008600.1 MGP_NODShiLtJ_G0006943.1 mouse_genomes_project 6 102728039 102729154 - Gm44278 lincRNA lincRNA MGP_NODShiLtJ_T0002107.1 MGP_NODShiLtJ_G0002019.1 mouse_genomes_project 6 145940704 145941395 + TEC TEC MGP_NODShiLtJ_T0015175.1 MGP_NODShiLtJ_G0013283.1 mouse_genomes_project 6 37378448 37379144 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077143.1 MGP_NODShiLtJ_G0030532.1 mouse_genomes_project 6 55230326 55234961 - Dfna5 protein_coding retained_intron MGP_NODShiLtJ_T0077144.1 MGP_NODShiLtJ_G0030532.1 mouse_genomes_project 6 55230803 55305212 - MGP_NODShiLtJ_P0077144 Dfna5 protein_coding protein_coding MGP_NODShiLtJ_T0077146.1 MGP_NODShiLtJ_G0030532.1 mouse_genomes_project 6 55242554 55305204 - MGP_NODShiLtJ_P0077146 Dfna5 protein_coding protein_coding MGP_NODShiLtJ_T0077147.1 MGP_NODShiLtJ_G0030532.1 mouse_genomes_project 6 55250576 55307319 - MGP_NODShiLtJ_P0077147 Dfna5 protein_coding protein_coding MGP_NODShiLtJ_T0077148.1 MGP_NODShiLtJ_G0030532.1 mouse_genomes_project 6 55250578 55305226 - MGP_NODShiLtJ_P0077148 Dfna5 protein_coding protein_coding MGP_NODShiLtJ_T0077149.1 MGP_NODShiLtJ_G0030532.1 mouse_genomes_project 6 55289584 55305483 - MGP_NODShiLtJ_P0077149 Dfna5 protein_coding protein_coding MGP_NODShiLtJ_T0077150.1 MGP_NODShiLtJ_G0030532.1 mouse_genomes_project 6 55302837 55305432 - Dfna5 protein_coding retained_intron MGP_NODShiLtJ_T0001977.1 MGP_NODShiLtJ_G0001889.1 mouse_genomes_project 6 87429629 87431817 - TEC TEC MGP_NODShiLtJ_T0015141.1 MGP_NODShiLtJ_G0013249.1 mouse_genomes_project 6 15341222 15341469 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015545.1 MGP_NODShiLtJ_G0013653.1 mouse_genomes_project 6 168007505 168008440 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098435.1 MGP_NODShiLtJ_G0036836.1 mouse_genomes_project 6 128100884 128104937 + Gm44200 sense_intronic sense_intronic MGP_NODShiLtJ_T0015357.1 MGP_NODShiLtJ_G0013465.1 mouse_genomes_project 6 100365570 100366093 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079112.1 MGP_NODShiLtJ_G0030957.1 mouse_genomes_project 6 130179611 130192063 - MGP_NODShiLtJ_P0079112 Mkrn2os protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079113.1 MGP_NODShiLtJ_G0030957.1 mouse_genomes_project 6 130181189 130192090 - MGP_NODShiLtJ_P0079113 Mkrn2os protein_coding protein_coding MGP_NODShiLtJ_T0015274.1 MGP_NODShiLtJ_G0013382.1 mouse_genomes_project 6 73185449 73185859 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001881.1 MGP_NODShiLtJ_G0001793.1 mouse_genomes_project 6 14638855 14641091 + TEC TEC MGP_NODShiLtJ_T0002522.1 MGP_NODShiLtJ_G0002423.1 mouse_genomes_project 6 45004755 45004804 + MGP_NODShiLtJ_P0002522 Trbj2-4 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0077515.1 MGP_NODShiLtJ_G0030635.1 mouse_genomes_project 6 73020841 73049313 - MGP_NODShiLtJ_P0077515 Hpgds protein_coding protein_coding MGP_NODShiLtJ_T0077516.1 MGP_NODShiLtJ_G0030635.1 mouse_genomes_project 6 73022585 73026474 - Hpgds protein_coding retained_intron MGP_NODShiLtJ_T0077517.1 MGP_NODShiLtJ_G0030635.1 mouse_genomes_project 6 73035517 73041809 - Hpgds protein_coding retained_intron MGP_NODShiLtJ_T0015166.1 MGP_NODShiLtJ_G0013274.1 mouse_genomes_project 6 30402798 30404172 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080122.1 MGP_NODShiLtJ_G0031169.1 mouse_genomes_project 6 146378232 146554743 - MGP_NODShiLtJ_P0080122 protein_coding protein_coding MGP_NODShiLtJ_T0080126.1 MGP_NODShiLtJ_G0031169.1 mouse_genomes_project 6 146378345 146554671 - MGP_NODShiLtJ_P0080126 protein_coding protein_coding MGP_NODShiLtJ_T0015119.1 MGP_NODShiLtJ_G0013227.1 mouse_genomes_project 6 4387577 4388522 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005025.1 MGP_NODShiLtJ_G0004285.1 mouse_genomes_project 6 140698691 140707647 + A230083G16Rik antisense antisense MGP_NODShiLtJ_T0077579.1 MGP_NODShiLtJ_G0030653.1 mouse_genomes_project 6 75439911 75496223 - MGP_NODShiLtJ_P0077579 Il12rb2 protein_coding protein_coding MGP_NODShiLtJ_T0077580.1 MGP_NODShiLtJ_G0030653.1 mouse_genomes_project 6 75440563 75539211 - MGP_NODShiLtJ_P0077580 Il12rb2 protein_coding protein_coding MGP_NODShiLtJ_T0076170.1 MGP_NODShiLtJ_G0030302.1 mouse_genomes_project 6 25466891 25471718 - Ndufa5 protein_coding retained_intron MGP_NODShiLtJ_T0076171.1 MGP_NODShiLtJ_G0030302.1 mouse_genomes_project 6 25466891 25476422 - MGP_NODShiLtJ_P0076171 Ndufa5 protein_coding protein_coding MGP_NODShiLtJ_T0076172.1 MGP_NODShiLtJ_G0030302.1 mouse_genomes_project 6 25466891 25476865 - MGP_NODShiLtJ_P0076172 Ndufa5 protein_coding protein_coding MGP_NODShiLtJ_T0076173.1 MGP_NODShiLtJ_G0030302.1 mouse_genomes_project 6 25466892 25476378 - Ndufa5 protein_coding processed_transcript MGP_NODShiLtJ_T0099426.1 MGP_NODShiLtJ_G0037820.1 mouse_genomes_project 6 45849340 45849447 - Gm24611 snRNA snRNA MGP_NODShiLtJ_T0008456.1 MGP_NODShiLtJ_G0006838.1 mouse_genomes_project 6 32704199 32708245 + 1700012C14Rik lincRNA lincRNA MGP_NODShiLtJ_T0008457.1 MGP_NODShiLtJ_G0006838.1 mouse_genomes_project 6 32705056 32708297 + 1700012C14Rik lincRNA lincRNA MGP_NODShiLtJ_T0078621.1 MGP_NODShiLtJ_G0030865.1 mouse_genomes_project 6 103911607 103914197 - MGP_NODShiLtJ_P0078621 Trh protein_coding protein_coding MGP_NODShiLtJ_T0076651.1 MGP_NODShiLtJ_G0030393.1 mouse_genomes_project 6 41421878 41483736 + MGP_NODShiLtJ_P0076651 Ttc26 protein_coding protein_coding MGP_NODShiLtJ_T0076652.1 MGP_NODShiLtJ_G0030393.1 mouse_genomes_project 6 41421934 41436466 + MGP_NODShiLtJ_P0076652 Ttc26 protein_coding protein_coding MGP_NODShiLtJ_T0076653.1 MGP_NODShiLtJ_G0030393.1 mouse_genomes_project 6 41421934 41483736 + MGP_NODShiLtJ_P0076653 Ttc26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076654.1 MGP_NODShiLtJ_G0030393.1 mouse_genomes_project 6 41421938 41439598 + MGP_NODShiLtJ_P0076654 Ttc26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076655.1 MGP_NODShiLtJ_G0030393.1 mouse_genomes_project 6 41432830 41436804 + Ttc26 protein_coding retained_intron MGP_NODShiLtJ_T0001890.1 MGP_NODShiLtJ_G0001802.1 mouse_genomes_project 6 22206665 22210707 + TEC TEC MGP_NODShiLtJ_T0008525.1 MGP_NODShiLtJ_G0006884.1 mouse_genomes_project 6 57302153 57311804 + Halr1 lincRNA lincRNA MGP_NODShiLtJ_T0008526.1 MGP_NODShiLtJ_G0006884.1 mouse_genomes_project 6 57302198 57312952 + Halr1 lincRNA lincRNA MGP_NODShiLtJ_T0008527.1 MGP_NODShiLtJ_G0006884.1 mouse_genomes_project 6 57302207 57311464 + Halr1 lincRNA lincRNA MGP_NODShiLtJ_T0015451.1 MGP_NODShiLtJ_G0013559.1 mouse_genomes_project 6 137657927 137658309 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001870.1 MGP_NODShiLtJ_G0001782.1 mouse_genomes_project 6 1734847 1736766 + TEC TEC MGP_NODShiLtJ_T0100702.1 MGP_NODShiLtJ_G0039096.1 mouse_genomes_project 6 131029828 131029958 - Gm23527 snoRNA snoRNA MGP_NODShiLtJ_T0099460.1 MGP_NODShiLtJ_G0037854.1 mouse_genomes_project 6 140749051 140749154 + Gm23851 snRNA snRNA MGP_NODShiLtJ_T0078545.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102823851 102887080 + MGP_NODShiLtJ_P0078545 Fbln2 protein_coding protein_coding MGP_NODShiLtJ_T0078546.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102823851 102887081 + MGP_NODShiLtJ_P0078546 Fbln2 protein_coding protein_coding MGP_NODShiLtJ_T0078547.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102824218 102844493 + MGP_NODShiLtJ_P0078547 Fbln2 protein_coding protein_coding MGP_NODShiLtJ_T0078548.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102824220 102844672 + MGP_NODShiLtJ_P0078548 Fbln2 protein_coding protein_coding MGP_NODShiLtJ_T0078549.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102824223 102825623 + Fbln2 protein_coding processed_transcript MGP_NODShiLtJ_T0078550.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102824227 102844692 + MGP_NODShiLtJ_P0078550 Fbln2 protein_coding protein_coding MGP_NODShiLtJ_T0078551.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102867431 102870608 + Fbln2 protein_coding retained_intron MGP_NODShiLtJ_T0078552.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102867834 102876180 + Fbln2 protein_coding retained_intron MGP_NODShiLtJ_T0078553.1 MGP_NODShiLtJ_G0030851.1 mouse_genomes_project 6 102878660 102886972 + Fbln2 protein_coding retained_intron MGP_NODShiLtJ_T0011528.1 MGP_NODShiLtJ_G0009661.1 mouse_genomes_project 6 52453771 52453848 + Gm25283 misc_RNA misc_RNA MGP_NODShiLtJ_T0000211.1 MGP_NODShiLtJ_G0000153.1 mouse_genomes_project 6 79020037 79020615 - MGP_NODShiLtJ_P0000211 Igkv8-21 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0079442.1 MGP_NODShiLtJ_G0031014.1 mouse_genomes_project 6 135890580 135899469 - Atp6v1e1 protein_coding retained_intron MGP_NODShiLtJ_T0079443.1 MGP_NODShiLtJ_G0031014.1 mouse_genomes_project 6 135891511 135915864 - MGP_NODShiLtJ_P0079443 Atp6v1e1 protein_coding protein_coding MGP_NODShiLtJ_T0079444.1 MGP_NODShiLtJ_G0031014.1 mouse_genomes_project 6 135891521 135911476 - MGP_NODShiLtJ_P0079444 Atp6v1e1 protein_coding protein_coding MGP_NODShiLtJ_T0079445.1 MGP_NODShiLtJ_G0031014.1 mouse_genomes_project 6 135900796 135915756 - Atp6v1e1 protein_coding retained_intron MGP_NODShiLtJ_T0079446.1 MGP_NODShiLtJ_G0031014.1 mouse_genomes_project 6 135901134 135915763 - MGP_NODShiLtJ_P0079446 Atp6v1e1 protein_coding protein_coding MGP_NODShiLtJ_T0079447.1 MGP_NODShiLtJ_G0031014.1 mouse_genomes_project 6 135904577 135915610 - MGP_NODShiLtJ_P0079447 Atp6v1e1 protein_coding protein_coding MGP_NODShiLtJ_T0078021.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94858916 94866497 + MGP_NODShiLtJ_P0078021 Nagk protein_coding protein_coding MGP_NODShiLtJ_T0078022.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94858962 94866495 + MGP_NODShiLtJ_P0078022 Nagk protein_coding protein_coding MGP_NODShiLtJ_T0078023.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94859095 94862551 + Nagk protein_coding retained_intron MGP_NODShiLtJ_T0078024.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94859142 94866275 + Nagk protein_coding processed_transcript MGP_NODShiLtJ_T0078025.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94859169 94867361 + MGP_NODShiLtJ_P0078025 Nagk protein_coding protein_coding MGP_NODShiLtJ_T0078026.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94860176 94860928 + Nagk protein_coding retained_intron MGP_NODShiLtJ_T0078027.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94860961 94864208 + Nagk protein_coding retained_intron MGP_NODShiLtJ_T0078028.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94861879 94863295 + Nagk protein_coding retained_intron MGP_NODShiLtJ_T0078029.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94861912 94865072 + Nagk protein_coding processed_transcript MGP_NODShiLtJ_T0078030.1 MGP_NODShiLtJ_G0030749.1 mouse_genomes_project 6 94866088 94867959 + Nagk protein_coding retained_intron MGP_NODShiLtJ_T0076905.1 MGP_NODShiLtJ_G0030475.1 mouse_genomes_project 6 46752779 46763897 + MGP_NODShiLtJ_P0076905 Olfr441 protein_coding protein_coding MGP_NODShiLtJ_T0076906.1 MGP_NODShiLtJ_G0030475.1 mouse_genomes_project 6 46762964 46763897 + MGP_NODShiLtJ_P0076906 Olfr441 protein_coding protein_coding MGP_NODShiLtJ_T0079145.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130457511 130527018 + MGP_NODShiLtJ_P0079145 Ift122 protein_coding protein_coding MGP_NODShiLtJ_T0079146.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130457571 130527008 + MGP_NODShiLtJ_P0079146 Ift122 protein_coding protein_coding MGP_NODShiLtJ_T0079147.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130457621 130527011 + MGP_NODShiLtJ_P0079147 Ift122 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079148.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130457629 130460126 + Ift122 protein_coding retained_intron MGP_NODShiLtJ_T0079149.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130457676 130526650 + MGP_NODShiLtJ_P0079149 Ift122 protein_coding protein_coding MGP_NODShiLtJ_T0079150.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130457686 130475101 + Ift122 protein_coding processed_transcript MGP_NODShiLtJ_T0079151.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130477070 130487098 + Ift122 protein_coding processed_transcript MGP_NODShiLtJ_T0079152.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130485663 130487103 + Ift122 protein_coding processed_transcript MGP_NODShiLtJ_T0079153.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130486882 130488575 + Ift122 protein_coding retained_intron MGP_NODShiLtJ_T0079154.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130493741 130499357 + Ift122 protein_coding retained_intron MGP_NODShiLtJ_T0079155.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130498847 130527012 + Ift122 protein_coding processed_transcript MGP_NODShiLtJ_T0079156.1 MGP_NODShiLtJ_G0030966.1 mouse_genomes_project 6 130502368 130527013 + Ift122 protein_coding retained_intron MGP_NODShiLtJ_T0079987.1 MGP_NODShiLtJ_G0031129.1 mouse_genomes_project 6 144465650 144471658 + Foxm1 protein_coding processed_transcript MGP_NODShiLtJ_T0079988.1 MGP_NODShiLtJ_G0031129.1 mouse_genomes_project 6 144465650 144478784 + MGP_NODShiLtJ_P0079988 Foxm1 protein_coding protein_coding MGP_NODShiLtJ_T0079989.1 MGP_NODShiLtJ_G0031129.1 mouse_genomes_project 6 144468384 144476603 + MGP_NODShiLtJ_P0079989 Foxm1 protein_coding protein_coding MGP_NODShiLtJ_T0079990.1 MGP_NODShiLtJ_G0031129.1 mouse_genomes_project 6 144468846 144475995 + MGP_NODShiLtJ_P0079990 Foxm1 protein_coding protein_coding MGP_NODShiLtJ_T0079991.1 MGP_NODShiLtJ_G0031129.1 mouse_genomes_project 6 144469983 144475508 + MGP_NODShiLtJ_P0079991 Foxm1 protein_coding protein_coding MGP_NODShiLtJ_T0079992.1 MGP_NODShiLtJ_G0031129.1 mouse_genomes_project 6 144470061 144474808 + Foxm1 protein_coding retained_intron MGP_NODShiLtJ_T0079993.1 MGP_NODShiLtJ_G0031129.1 mouse_genomes_project 6 144472135 144474008 + Foxm1 protein_coding retained_intron MGP_NODShiLtJ_T0079994.1 MGP_NODShiLtJ_G0031129.1 mouse_genomes_project 6 144473596 144475819 + Foxm1 protein_coding retained_intron MGP_NODShiLtJ_T0015307.1 MGP_NODShiLtJ_G0013415.1 mouse_genomes_project 6 76619790 76621300 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075897.1 MGP_NODShiLtJ_G0030249.1 mouse_genomes_project 6 4060549 4064826 - MGP_NODShiLtJ_P0075897 Dlx5 protein_coding protein_coding MGP_NODShiLtJ_T0075898.1 MGP_NODShiLtJ_G0030249.1 mouse_genomes_project 6 4060549 4064809 - MGP_NODShiLtJ_P0075898 Dlx5 protein_coding protein_coding MGP_NODShiLtJ_T0075899.1 MGP_NODShiLtJ_G0030249.1 mouse_genomes_project 6 4063432 4064823 - Dlx5 protein_coding retained_intron MGP_NODShiLtJ_T0002115.1 MGP_NODShiLtJ_G0002027.1 mouse_genomes_project 6 152805420 152805676 - TEC TEC MGP_NODShiLtJ_T0075849.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1897759 2174119 + MGP_NODShiLtJ_P0075849 Ppp1r9a protein_coding protein_coding MGP_NODShiLtJ_T0075850.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1897816 2082240 + MGP_NODShiLtJ_P0075850 Ppp1r9a protein_coding protein_coding MGP_NODShiLtJ_T0075851.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1897860 2174750 + MGP_NODShiLtJ_P0075851 Ppp1r9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075852.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1898151 2180198 + MGP_NODShiLtJ_P0075852 Ppp1r9a protein_coding protein_coding MGP_NODShiLtJ_T0075853.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1898204 2011220 + MGP_NODShiLtJ_P0075853 Ppp1r9a protein_coding protein_coding MGP_NODShiLtJ_T0075854.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1898263 2179045 + Ppp1r9a protein_coding retained_intron MGP_NODShiLtJ_T0075855.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1898619 1901619 + MGP_NODShiLtJ_P0075855 Ppp1r9a protein_coding protein_coding MGP_NODShiLtJ_T0075856.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1900247 2174338 + MGP_NODShiLtJ_P0075856 Ppp1r9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075857.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1900247 2174346 + MGP_NODShiLtJ_P0075857 Ppp1r9a protein_coding protein_coding MGP_NODShiLtJ_T0075858.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 1901238 2168779 + MGP_NODShiLtJ_P0075858 Ppp1r9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075859.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 2121088 2124217 + Ppp1r9a protein_coding processed_transcript MGP_NODShiLtJ_T0075860.1 MGP_NODShiLtJ_G0030239.1 mouse_genomes_project 6 2123888 2126938 + Ppp1r9a protein_coding retained_intron MGP_NODShiLtJ_T0099463.1 MGP_NODShiLtJ_G0037857.1 mouse_genomes_project 6 146371755 146371829 + Gm23977 snRNA snRNA MGP_NODShiLtJ_T0077685.1 MGP_NODShiLtJ_G0030678.1 mouse_genomes_project 6 81216403 81244334 - MGP_NODShiLtJ_P0077685 protein_coding protein_coding MGP_NODShiLtJ_T0077686.1 MGP_NODShiLtJ_G0030678.1 mouse_genomes_project 6 81219366 81232813 - protein_coding retained_intron MGP_NODShiLtJ_T0077687.1 MGP_NODShiLtJ_G0030678.1 mouse_genomes_project 6 81235716 81242396 - MGP_NODShiLtJ_P0077687 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005052.1 MGP_NODShiLtJ_G0004308.1 mouse_genomes_project 6 153717705 153720185 + Gm26653 antisense antisense MGP_NODShiLtJ_T0078127.1 MGP_NODShiLtJ_G0030765.1 mouse_genomes_project 6 96764758 96767227 - MGP_NODShiLtJ_P0078127 Egr4 protein_coding protein_coding MGP_NODShiLtJ_T0005035.1 MGP_NODShiLtJ_G0004293.1 mouse_genomes_project 6 143814127 143815489 + Gm42738 antisense antisense MGP_NODShiLtJ_T0010653.1 MGP_NODShiLtJ_G0008786.1 mouse_genomes_project 6 33010463 33010561 + Mir335 miRNA miRNA MGP_NODShiLtJ_T0008662.1 MGP_NODShiLtJ_G0006997.1 mouse_genomes_project 6 145565474 145599035 - 2310001H17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008663.1 MGP_NODShiLtJ_G0006997.1 mouse_genomes_project 6 145570563 145595197 - 2310001H17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008664.1 MGP_NODShiLtJ_G0006997.1 mouse_genomes_project 6 145574179 145599078 - 2310001H17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008665.1 MGP_NODShiLtJ_G0006997.1 mouse_genomes_project 6 145592956 145599812 - 2310001H17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008666.1 MGP_NODShiLtJ_G0006997.1 mouse_genomes_project 6 145593016 145599569 - 2310001H17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008667.1 MGP_NODShiLtJ_G0006997.1 mouse_genomes_project 6 145593121 145595206 - 2310001H17Rik lincRNA lincRNA MGP_NODShiLtJ_T0010692.1 MGP_NODShiLtJ_G0008825.1 mouse_genomes_project 6 129643214 129643309 + Gm24767 miRNA miRNA MGP_NODShiLtJ_T0001927.1 MGP_NODShiLtJ_G0001839.1 mouse_genomes_project 6 49891365 49894594 + TEC TEC MGP_NODShiLtJ_T0098061.1 MGP_NODShiLtJ_G0036473.1 mouse_genomes_project 6 32583571 32583667 - Gm25625 rRNA rRNA MGP_NODShiLtJ_T0077591.1 MGP_NODShiLtJ_G0030659.1 mouse_genomes_project 6 79702751 79707271 + MGP_NODShiLtJ_P0077591 Foxi3 protein_coding protein_coding MGP_NODShiLtJ_T0077592.1 MGP_NODShiLtJ_G0030659.1 mouse_genomes_project 6 79702826 79707274 + MGP_NODShiLtJ_P0077592 Foxi3 protein_coding protein_coding MGP_NODShiLtJ_T0077203.1 MGP_NODShiLtJ_G0030545.1 mouse_genomes_project 6 57373821 57419381 - MGP_NODShiLtJ_P0077203 Hoxa3 protein_coding protein_coding MGP_NODShiLtJ_T0077204.1 MGP_NODShiLtJ_G0030545.1 mouse_genomes_project 6 57377331 57389114 - MGP_NODShiLtJ_P0077204 Hoxa3 protein_coding protein_coding MGP_NODShiLtJ_T0077206.1 MGP_NODShiLtJ_G0030545.1 mouse_genomes_project 6 57385818 57390133 - Hoxa3 protein_coding processed_transcript MGP_NODShiLtJ_T0077208.1 MGP_NODShiLtJ_G0030545.1 mouse_genomes_project 6 57405444 57419602 - Hoxa3 protein_coding retained_intron MGP_NODShiLtJ_T0079479.1 MGP_NODShiLtJ_G0031019.1 mouse_genomes_project 6 136323847 136341942 + MGP_NODShiLtJ_P0079479 Tuba8 protein_coding protein_coding MGP_NODShiLtJ_T0011546.1 MGP_NODShiLtJ_G0009679.1 mouse_genomes_project 6 94640557 94640880 - Gm24990 misc_RNA misc_RNA MGP_NODShiLtJ_T0015272.1 MGP_NODShiLtJ_G0013380.1 mouse_genomes_project 6 73142089 73142440 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015173.1 MGP_NODShiLtJ_G0013281.1 mouse_genomes_project 6 35798152 35812815 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076165.1 MGP_NODShiLtJ_G0030300.1 mouse_genomes_project 6 24987612 25077885 - MGP_NODShiLtJ_P0076165 Slc13a1 protein_coding protein_coding MGP_NODShiLtJ_T0076166.1 MGP_NODShiLtJ_G0030300.1 mouse_genomes_project 6 24987879 25010639 - Slc13a1 protein_coding processed_transcript MGP_NODShiLtJ_T0076167.1 MGP_NODShiLtJ_G0030300.1 mouse_genomes_project 6 25007356 25010636 - Slc13a1 protein_coding retained_intron MGP_NODShiLtJ_T0076168.1 MGP_NODShiLtJ_G0030300.1 mouse_genomes_project 6 25039979 25077883 - Slc13a1 protein_coding retained_intron MGP_NODShiLtJ_T0076260.1 MGP_NODShiLtJ_G0030326.1 mouse_genomes_project 6 31408689 31417443 + MGP_NODShiLtJ_P0076260 Fam71f2 protein_coding protein_coding MGP_NODShiLtJ_T0076261.1 MGP_NODShiLtJ_G0030326.1 mouse_genomes_project 6 31410237 31421723 + MGP_NODShiLtJ_P0076261 Fam71f2 protein_coding protein_coding MGP_NODShiLtJ_T0076262.1 MGP_NODShiLtJ_G0030326.1 mouse_genomes_project 6 31410239 31421718 + MGP_NODShiLtJ_P0076262 Fam71f2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076724.1 MGP_NODShiLtJ_G0030406.1 mouse_genomes_project 6 42640064 42742897 - MGP_NODShiLtJ_P0076724 Dennd2a protein_coding protein_coding MGP_NODShiLtJ_T0076725.1 MGP_NODShiLtJ_G0030406.1 mouse_genomes_project 6 42640939 42666102 - Dennd2a protein_coding retained_intron MGP_NODShiLtJ_T0076726.1 MGP_NODShiLtJ_G0030406.1 mouse_genomes_project 6 42645895 42648016 - Dennd2a protein_coding retained_intron MGP_NODShiLtJ_T0076727.1 MGP_NODShiLtJ_G0030406.1 mouse_genomes_project 6 42661514 42663392 - Dennd2a protein_coding retained_intron MGP_NODShiLtJ_T0076728.1 MGP_NODShiLtJ_G0030406.1 mouse_genomes_project 6 42673907 42742897 - MGP_NODShiLtJ_P0076728 Dennd2a protein_coding protein_coding MGP_NODShiLtJ_T0077400.1 MGP_NODShiLtJ_G0030596.1 mouse_genomes_project 6 62799157 62800092 + MGP_NODShiLtJ_P0077400 Vmn1r12 protein_coding protein_coding MGP_NODShiLtJ_T0078055.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95117983 95335844 + MGP_NODShiLtJ_P0078055 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078056.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95118095 95335680 + MGP_NODShiLtJ_P0078056 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078057.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95118095 95335680 + MGP_NODShiLtJ_P0078057 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078058.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95118095 95335680 + MGP_NODShiLtJ_P0078058 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078059.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95118160 95335680 + MGP_NODShiLtJ_P0078059 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078060.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95118308 95335843 + MGP_NODShiLtJ_P0078060 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078061.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95128619 95335843 + MGP_NODShiLtJ_P0078061 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078062.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95128619 95335641 + MGP_NODShiLtJ_P0078062 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078063.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95128619 95335641 + MGP_NODShiLtJ_P0078063 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078064.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95128619 95335641 + MGP_NODShiLtJ_P0078064 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078065.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95128620 95335844 + MGP_NODShiLtJ_P0078065 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078066.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95128623 95335843 + MGP_NODShiLtJ_P0078066 Dysf protein_coding protein_coding MGP_NODShiLtJ_T0078067.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95224818 95232929 + Dysf protein_coding processed_transcript MGP_NODShiLtJ_T0078068.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95225996 95237609 + Dysf protein_coding retained_intron MGP_NODShiLtJ_T0078069.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95268673 95274339 + Dysf protein_coding processed_transcript MGP_NODShiLtJ_T0078070.1 MGP_NODShiLtJ_G0030752.1 mouse_genomes_project 6 95335267 95335825 + Dysf protein_coding processed_transcript MGP_NODShiLtJ_T0076870.1 MGP_NODShiLtJ_G0030455.1 mouse_genomes_project 6 45870180 45886369 - MGP_NODShiLtJ_P0076870 Epha1 protein_coding protein_coding MGP_NODShiLtJ_T0076871.1 MGP_NODShiLtJ_G0030455.1 mouse_genomes_project 6 45870409 45886369 - MGP_NODShiLtJ_P0076871 Epha1 protein_coding protein_coding MGP_NODShiLtJ_T0076872.1 MGP_NODShiLtJ_G0030455.1 mouse_genomes_project 6 45880143 45886336 - Epha1 protein_coding retained_intron MGP_NODShiLtJ_T0015309.1 MGP_NODShiLtJ_G0013417.1 mouse_genomes_project 6 80131831 80132230 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002020.1 MGP_NODShiLtJ_G0001932.1 mouse_genomes_project 6 99289000 99290087 + TEC TEC MGP_NODShiLtJ_T0015341.1 MGP_NODShiLtJ_G0013449.1 mouse_genomes_project 6 94981926 94982290 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010662.1 MGP_NODShiLtJ_G0008795.1 mouse_genomes_project 6 55659512 55659623 + Mir6371 miRNA miRNA MGP_NODShiLtJ_T0015528.1 MGP_NODShiLtJ_G0013636.1 mouse_genomes_project 6 159435944 159436474 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015324.1 MGP_NODShiLtJ_G0013432.1 mouse_genomes_project 6 86331712 86332187 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005573.1 MGP_NODShiLtJ_G0004688.1 mouse_genomes_project 6 130836628 130845232 - 9530062K07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0000312.1 MGP_NODShiLtJ_G0000250.1 mouse_genomes_project 6 78367494 78367972 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0001872.1 MGP_NODShiLtJ_G0001784.1 mouse_genomes_project 6 1942338 1943639 + TEC TEC MGP_NODShiLtJ_T0002634.1 MGP_NODShiLtJ_G0002516.1 mouse_genomes_project 6 44485711 44486183 + MGP_NODShiLtJ_P0002634 Trbv14 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0076499.1 MGP_NODShiLtJ_G0030362.1 mouse_genomes_project 6 36532333 36643732 + MGP_NODShiLtJ_P0076499 Lrguk protein_coding protein_coding MGP_NODShiLtJ_T0076500.1 MGP_NODShiLtJ_G0030362.1 mouse_genomes_project 6 36532335 36551142 + MGP_NODShiLtJ_P0076500 Lrguk protein_coding protein_coding MGP_NODShiLtJ_T0076501.1 MGP_NODShiLtJ_G0030362.1 mouse_genomes_project 6 36542191 36551157 + MGP_NODShiLtJ_P0076501 Lrguk protein_coding protein_coding MGP_NODShiLtJ_T0102049.1 MGP_NODShiLtJ_G0040216.1 mouse_genomes_project 6 150633954 150640792 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011537.1 MGP_NODShiLtJ_G0009670.1 mouse_genomes_project 6 57452987 57453078 + Gm27695 misc_RNA misc_RNA MGP_NODShiLtJ_T0008711.1 MGP_NODShiLtJ_G0007027.1 mouse_genomes_project 6 167526280 167545131 - 4930528G23Rik lincRNA lincRNA MGP_NODShiLtJ_T0004962.1 MGP_NODShiLtJ_G0004239.1 mouse_genomes_project 6 99079637 99086663 + Gm44097 antisense antisense MGP_NODShiLtJ_T0005065.1 MGP_NODShiLtJ_G0004318.1 mouse_genomes_project 6 163383161 163423279 + Sox5os4 antisense antisense MGP_NODShiLtJ_T0008550.1 MGP_NODShiLtJ_G0006904.1 mouse_genomes_project 6 80076275 80083749 + Gm1070 lincRNA lincRNA MGP_NODShiLtJ_T0015200.1 MGP_NODShiLtJ_G0013308.1 mouse_genomes_project 6 47617686 47619451 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098069.1 MGP_NODShiLtJ_G0036481.1 mouse_genomes_project 6 149528741 149528862 + n-R5s166 rRNA rRNA MGP_NODShiLtJ_T0004920.1 MGP_NODShiLtJ_G0004217.1 mouse_genomes_project 6 81246197 81247631 - Gm45051 antisense antisense MGP_NODShiLtJ_T0015107.1 MGP_NODShiLtJ_G0013215.1 mouse_genomes_project 6 670636 671024 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080500.1 MGP_NODShiLtJ_G0031275.1 mouse_genomes_project 6 160854480 160867821 + MGP_NODShiLtJ_P0080500 Golt1b protein_coding protein_coding MGP_NODShiLtJ_T0080501.1 MGP_NODShiLtJ_G0031275.1 mouse_genomes_project 6 160854512 160865683 + Golt1b protein_coding processed_transcript MGP_NODShiLtJ_T0078230.1 MGP_NODShiLtJ_G0030785.1 mouse_genomes_project 6 98003901 98026398 - MGP_NODShiLtJ_P0078230 Mxd1 protein_coding protein_coding MGP_NODShiLtJ_T0078231.1 MGP_NODShiLtJ_G0030785.1 mouse_genomes_project 6 98005875 98020355 - MGP_NODShiLtJ_P0078231 Mxd1 protein_coding protein_coding MGP_NODShiLtJ_T0078232.1 MGP_NODShiLtJ_G0030785.1 mouse_genomes_project 6 98007659 98026337 - MGP_NODShiLtJ_P0078232 Mxd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078233.1 MGP_NODShiLtJ_G0030785.1 mouse_genomes_project 6 98023437 98026354 - Mxd1 protein_coding retained_intron MGP_NODShiLtJ_T0079157.1 MGP_NODShiLtJ_G0030967.1 mouse_genomes_project 6 130532060 130540341 + MGP_NODShiLtJ_P0079157 Rho protein_coding protein_coding MGP_NODShiLtJ_T0079158.1 MGP_NODShiLtJ_G0030967.1 mouse_genomes_project 6 130532237 130534416 + Rho protein_coding retained_intron MGP_NODShiLtJ_T0079159.1 MGP_NODShiLtJ_G0030967.1 mouse_genomes_project 6 130532869 130537026 + MGP_NODShiLtJ_P0079159 Rho protein_coding protein_coding MGP_NODShiLtJ_T0079160.1 MGP_NODShiLtJ_G0030967.1 mouse_genomes_project 6 130534658 130537271 + MGP_NODShiLtJ_P0079160 Rho protein_coding protein_coding MGP_NODShiLtJ_T0079161.1 MGP_NODShiLtJ_G0030967.1 mouse_genomes_project 6 130534689 130537391 + MGP_NODShiLtJ_P0079161 Rho protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079162.1 MGP_NODShiLtJ_G0030967.1 mouse_genomes_project 6 130535055 130536362 + Rho protein_coding retained_intron MGP_NODShiLtJ_T0079163.1 MGP_NODShiLtJ_G0030967.1 mouse_genomes_project 6 130535514 130536547 + Rho protein_coding retained_intron MGP_NODShiLtJ_T0015160.1 MGP_NODShiLtJ_G0013268.1 mouse_genomes_project 6 25044444 25046498 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001945.1 MGP_NODShiLtJ_G0001857.1 mouse_genomes_project 6 57978569 57979181 - TEC TEC MGP_NODShiLtJ_T0008716.1 MGP_NODShiLtJ_G0007032.1 mouse_genomes_project 6 168606078 168606951 + lincRNA lincRNA MGP_NODShiLtJ_T0004884.1 MGP_NODShiLtJ_G0004190.1 mouse_genomes_project 6 44278045 44278343 + Gm29588 antisense antisense MGP_NODShiLtJ_T0015494.1 MGP_NODShiLtJ_G0013602.1 mouse_genomes_project 6 147977058 147977173 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076742.1 MGP_NODShiLtJ_G0030410.1 mouse_genomes_project 6 42792842 42932971 - MGP_NODShiLtJ_P0076742 Braf protein_coding protein_coding MGP_NODShiLtJ_T0076743.1 MGP_NODShiLtJ_G0030410.1 mouse_genomes_project 6 42803729 42932660 - MGP_NODShiLtJ_P0076743 Braf protein_coding protein_coding MGP_NODShiLtJ_T0076744.1 MGP_NODShiLtJ_G0030410.1 mouse_genomes_project 6 42831764 42838077 - Braf protein_coding retained_intron MGP_NODShiLtJ_T0076745.1 MGP_NODShiLtJ_G0030410.1 mouse_genomes_project 6 42832779 42836545 - Braf protein_coding retained_intron MGP_NODShiLtJ_T0076746.1 MGP_NODShiLtJ_G0030410.1 mouse_genomes_project 6 42846298 42866475 - Braf protein_coding retained_intron MGP_NODShiLtJ_T0000048.1 MGP_NODShiLtJ_G0000039.1 mouse_genomes_project 6 79451094 79451132 + MGP_NODShiLtJ_P0000048 Igkj5 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0000049.1 MGP_NODShiLtJ_G0000039.1 mouse_genomes_project 6 79451094 79451136 + Igkj5 IG_J_gene processed_transcript MGP_NODShiLtJ_T0015421.1 MGP_NODShiLtJ_G0013529.1 mouse_genomes_project 6 128567777 128567853 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004868.1 MGP_NODShiLtJ_G0004176.1 mouse_genomes_project 6 34870911 34875415 + Plxna4os1 antisense antisense MGP_NODShiLtJ_T0011543.1 MGP_NODShiLtJ_G0009676.1 mouse_genomes_project 6 57472725 57473086 + Gm27383 misc_RNA misc_RNA MGP_NODShiLtJ_T0015225.1 MGP_NODShiLtJ_G0013333.1 mouse_genomes_project 6 54742794 54743067 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008467.1 MGP_NODShiLtJ_G0006845.1 mouse_genomes_project 6 33670014 33701838 - Mkln1os lincRNA lincRNA MGP_NODShiLtJ_T0008469.1 MGP_NODShiLtJ_G0006845.1 mouse_genomes_project 6 33686162 33701818 - Mkln1os lincRNA lincRNA MGP_NODShiLtJ_T0008470.1 MGP_NODShiLtJ_G0006845.1 mouse_genomes_project 6 33687809 33701824 - Mkln1os lincRNA lincRNA MGP_NODShiLtJ_T0076969.1 MGP_NODShiLtJ_G0030491.1 mouse_genomes_project 6 52699518 52731175 + MGP_NODShiLtJ_P0076969 Zfp282 protein_coding protein_coding MGP_NODShiLtJ_T0076970.1 MGP_NODShiLtJ_G0030491.1 mouse_genomes_project 6 52699970 52715173 + Zfp282 protein_coding retained_intron MGP_NODShiLtJ_T0079200.1 MGP_NODShiLtJ_G0030973.1 mouse_genomes_project 6 130927776 130970223 + MGP_NODShiLtJ_P0079200 Zfand4 protein_coding protein_coding MGP_NODShiLtJ_T0077485.1 MGP_NODShiLtJ_G0030631.1 mouse_genomes_project 6 67831666 69500604 + MGP_NODShiLtJ_P0077485 Ccser1 protein_coding protein_coding MGP_NODShiLtJ_T0077486.1 MGP_NODShiLtJ_G0030631.1 mouse_genomes_project 6 67979100 69497067 + MGP_NODShiLtJ_P0077486 Ccser1 protein_coding protein_coding MGP_NODShiLtJ_T0077487.1 MGP_NODShiLtJ_G0030631.1 mouse_genomes_project 6 67982046 68330626 + Ccser1 protein_coding retained_intron MGP_NODShiLtJ_T0077488.1 MGP_NODShiLtJ_G0030631.1 mouse_genomes_project 6 67987679 68330388 + Ccser1 protein_coding processed_transcript MGP_NODShiLtJ_T0077489.1 MGP_NODShiLtJ_G0030631.1 mouse_genomes_project 6 68074882 68522417 + Ccser1 protein_coding retained_intron MGP_NODShiLtJ_T0077490.1 MGP_NODShiLtJ_G0030631.1 mouse_genomes_project 6 68074917 68195447 + Ccser1 protein_coding processed_transcript MGP_NODShiLtJ_T0077491.1 MGP_NODShiLtJ_G0030631.1 mouse_genomes_project 6 68330289 68664528 + MGP_NODShiLtJ_P0077491 Ccser1 protein_coding protein_coding MGP_NODShiLtJ_T0077492.1 MGP_NODShiLtJ_G0030631.1 mouse_genomes_project 6 68601245 68664067 + Ccser1 protein_coding processed_transcript MGP_NODShiLtJ_T0076754.1 MGP_NODShiLtJ_G0030413.1 mouse_genomes_project 6 43578655 43579936 + protein_coding retained_intron MGP_NODShiLtJ_T0015540.1 MGP_NODShiLtJ_G0013648.1 mouse_genomes_project 6 167096037 167096440 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008466.1 MGP_NODShiLtJ_G0006844.1 mouse_genomes_project 6 33658900 33675499 + Gm14532 lincRNA lincRNA MGP_NODShiLtJ_T0004918.1 MGP_NODShiLtJ_G0004216.1 mouse_genomes_project 6 80988305 80991051 - 4933431G14Rik antisense antisense MGP_NODShiLtJ_T0004919.1 MGP_NODShiLtJ_G0004216.1 mouse_genomes_project 6 80988305 80991318 - 4933431G14Rik antisense antisense MGP_NODShiLtJ_T0078674.1 MGP_NODShiLtJ_G0030879.1 mouse_genomes_project 6 109230083 109271433 - MGP_NODShiLtJ_P0078674 Eogt protein_coding protein_coding MGP_NODShiLtJ_T0078675.1 MGP_NODShiLtJ_G0030879.1 mouse_genomes_project 6 109232037 109271134 - Eogt protein_coding processed_transcript MGP_NODShiLtJ_T0078676.1 MGP_NODShiLtJ_G0030879.1 mouse_genomes_project 6 109232066 109271178 - MGP_NODShiLtJ_P0078676 Eogt protein_coding protein_coding MGP_NODShiLtJ_T0078677.1 MGP_NODShiLtJ_G0030879.1 mouse_genomes_project 6 109232251 109239878 - Eogt protein_coding processed_transcript MGP_NODShiLtJ_T0078678.1 MGP_NODShiLtJ_G0030879.1 mouse_genomes_project 6 109256492 109270035 - MGP_NODShiLtJ_P0078678 Eogt protein_coding protein_coding MGP_NODShiLtJ_T0078679.1 MGP_NODShiLtJ_G0030879.1 mouse_genomes_project 6 109266229 109270045 - MGP_NODShiLtJ_P0078679 Eogt protein_coding protein_coding MGP_NODShiLtJ_T0078680.1 MGP_NODShiLtJ_G0030879.1 mouse_genomes_project 6 109267520 109271111 - MGP_NODShiLtJ_P0078680 Eogt protein_coding protein_coding MGP_NODShiLtJ_T0078681.1 MGP_NODShiLtJ_G0030879.1 mouse_genomes_project 6 109267574 109271175 - MGP_NODShiLtJ_P0078681 Eogt protein_coding protein_coding MGP_NODShiLtJ_T0078290.1 MGP_NODShiLtJ_G0030797.1 mouse_genomes_project 6 98818941 98828767 + MGP_NODShiLtJ_P0078290 Bmp10 protein_coding protein_coding MGP_NODShiLtJ_T0077167.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56599422 56608636 - MGP_NODShiLtJ_P0077167 Hnrnpa2b1 protein_coding protein_coding MGP_NODShiLtJ_T0077168.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56599611 56608589 - MGP_NODShiLtJ_P0077168 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077169.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56599614 56608587 - MGP_NODShiLtJ_P0077169 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077170.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56599614 56608587 - MGP_NODShiLtJ_P0077170 Hnrnpa2b1 protein_coding protein_coding MGP_NODShiLtJ_T0077171.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56599635 56601675 - Hnrnpa2b1 protein_coding retained_intron MGP_NODShiLtJ_T0077172.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56601250 56608568 - MGP_NODShiLtJ_P0077172 Hnrnpa2b1 protein_coding protein_coding MGP_NODShiLtJ_T0077173.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56601250 56608514 - MGP_NODShiLtJ_P0077173 Hnrnpa2b1 protein_coding protein_coding MGP_NODShiLtJ_T0077174.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56601250 56608514 - MGP_NODShiLtJ_P0077174 Hnrnpa2b1 protein_coding protein_coding MGP_NODShiLtJ_T0077175.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56601290 56602647 - Hnrnpa2b1 protein_coding retained_intron MGP_NODShiLtJ_T0077176.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56601962 56605398 - MGP_NODShiLtJ_P0077176 Hnrnpa2b1 protein_coding protein_coding MGP_NODShiLtJ_T0077177.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56603118 56604934 - Hnrnpa2b1 protein_coding retained_intron MGP_NODShiLtJ_T0077178.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56603488 56605364 - Hnrnpa2b1 protein_coding retained_intron MGP_NODShiLtJ_T0077179.1 MGP_NODShiLtJ_G0030538.1 mouse_genomes_project 6 56604315 56608626 - Hnrnpa2b1 protein_coding retained_intron MGP_NODShiLtJ_T0015521.1 MGP_NODShiLtJ_G0013629.1 mouse_genomes_project 6 158233675 158234865 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008562.1 MGP_NODShiLtJ_G0006916.1 mouse_genomes_project 6 92585061 92622464 - Gm43902 lincRNA lincRNA MGP_NODShiLtJ_T0000216.1 MGP_NODShiLtJ_G0000156.1 mouse_genomes_project 6 79401636 79402248 + MGP_NODShiLtJ_P0000216 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0015361.1 MGP_NODShiLtJ_G0013469.1 mouse_genomes_project 6 103221006 103221401 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018125.1 MGP_NODShiLtJ_G0015502.1 mouse_genomes_project 6 70650579 70655068 - processed_transcript retained_intron MGP_NODShiLtJ_T0002103.1 MGP_NODShiLtJ_G0002015.1 mouse_genomes_project 6 144462193 144462660 + TEC TEC MGP_NODShiLtJ_T0005076.1 MGP_NODShiLtJ_G0004328.1 mouse_genomes_project 6 166872480 166890339 - antisense antisense MGP_NODShiLtJ_T0077340.1 MGP_NODShiLtJ_G0030578.1 mouse_genomes_project 6 60886320 60933084 + MGP_NODShiLtJ_P0077340 Adcyap1r1 protein_coding protein_coding MGP_NODShiLtJ_T0077341.1 MGP_NODShiLtJ_G0030578.1 mouse_genomes_project 6 60886370 60935624 + MGP_NODShiLtJ_P0077341 Adcyap1r1 protein_coding protein_coding MGP_NODShiLtJ_T0077342.1 MGP_NODShiLtJ_G0030578.1 mouse_genomes_project 6 60886399 60912405 + MGP_NODShiLtJ_P0077342 Adcyap1r1 protein_coding protein_coding MGP_NODShiLtJ_T0077343.1 MGP_NODShiLtJ_G0030578.1 mouse_genomes_project 6 60886519 60894553 + MGP_NODShiLtJ_P0077343 Adcyap1r1 protein_coding protein_coding MGP_NODShiLtJ_T0077344.1 MGP_NODShiLtJ_G0030578.1 mouse_genomes_project 6 60894543 60931607 + MGP_NODShiLtJ_P0077344 Adcyap1r1 protein_coding protein_coding MGP_NODShiLtJ_T0077345.1 MGP_NODShiLtJ_G0030578.1 mouse_genomes_project 6 60894543 60931350 + MGP_NODShiLtJ_P0077345 Adcyap1r1 protein_coding protein_coding MGP_NODShiLtJ_T0077346.1 MGP_NODShiLtJ_G0030578.1 mouse_genomes_project 6 60894543 60931350 + MGP_NODShiLtJ_P0077346 Adcyap1r1 protein_coding protein_coding MGP_NODShiLtJ_T0077347.1 MGP_NODShiLtJ_G0030578.1 mouse_genomes_project 6 60894543 60931350 + MGP_NODShiLtJ_P0077347 Adcyap1r1 protein_coding protein_coding MGP_NODShiLtJ_T0000198.1 MGP_NODShiLtJ_G0000144.1 mouse_genomes_project 6 78605132 78605595 - MGP_NODShiLtJ_P0000198 Igkv12-38 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000199.1 MGP_NODShiLtJ_G0000144.1 mouse_genomes_project 6 78605132 78605595 - MGP_NODShiLtJ_P0000199 Igkv12-38 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0001963.1 MGP_NODShiLtJ_G0001875.1 mouse_genomes_project 6 80633851 80636779 + TEC TEC MGP_NODShiLtJ_T0077396.1 MGP_NODShiLtJ_G0030592.1 mouse_genomes_project 6 62642313 62644533 + MGP_NODShiLtJ_P0077396 protein_coding protein_coding MGP_NODShiLtJ_T0080076.1 MGP_NODShiLtJ_G0031154.1 mouse_genomes_project 6 145794650 145811189 + MGP_NODShiLtJ_P0080076 Clec9a protein_coding protein_coding MGP_NODShiLtJ_T0080077.1 MGP_NODShiLtJ_G0031154.1 mouse_genomes_project 6 145794651 145808995 + MGP_NODShiLtJ_P0080077 Clec9a protein_coding protein_coding MGP_NODShiLtJ_T0080078.1 MGP_NODShiLtJ_G0031154.1 mouse_genomes_project 6 145794743 145808784 + MGP_NODShiLtJ_P0080078 Clec9a protein_coding protein_coding MGP_NODShiLtJ_T0080079.1 MGP_NODShiLtJ_G0031154.1 mouse_genomes_project 6 145794743 145808784 + MGP_NODShiLtJ_P0080079 Clec9a protein_coding protein_coding MGP_NODShiLtJ_T0005023.1 MGP_NODShiLtJ_G0004283.1 mouse_genomes_project 6 140488874 140492133 - Gm15884 antisense antisense MGP_NODShiLtJ_T0102038.1 MGP_NODShiLtJ_G0040205.1 mouse_genomes_project 6 148998940 149061095 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0077264.1 MGP_NODShiLtJ_G0030561.1 mouse_genomes_project 6 59188600 59299439 - MGP_NODShiLtJ_P0077264 Cpvl protein_coding protein_coding MGP_NODShiLtJ_T0077265.1 MGP_NODShiLtJ_G0030561.1 mouse_genomes_project 6 59188734 59299430 - MGP_NODShiLtJ_P0077265 Cpvl protein_coding protein_coding MGP_NODShiLtJ_T0077266.1 MGP_NODShiLtJ_G0030561.1 mouse_genomes_project 6 59188734 59299430 - MGP_NODShiLtJ_P0077266 Cpvl protein_coding protein_coding MGP_NODShiLtJ_T0099427.1 MGP_NODShiLtJ_G0037821.1 mouse_genomes_project 6 46421588 46421694 + Gm23982 snRNA snRNA MGP_NODShiLtJ_T0000296.1 MGP_NODShiLtJ_G0000234.1 mouse_genomes_project 6 76873022 76873280 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0076502.1 MGP_NODShiLtJ_G0030363.1 mouse_genomes_project 6 36664046 36687778 - MGP_NODShiLtJ_P0076502 Slc35b4 protein_coding protein_coding MGP_NODShiLtJ_T0076503.1 MGP_NODShiLtJ_G0030363.1 mouse_genomes_project 6 36667389 36674149 - Slc35b4 protein_coding retained_intron MGP_NODShiLtJ_T0076504.1 MGP_NODShiLtJ_G0030363.1 mouse_genomes_project 6 36668751 36687637 - Slc35b4 protein_coding retained_intron MGP_NODShiLtJ_T0076505.1 MGP_NODShiLtJ_G0030363.1 mouse_genomes_project 6 36671184 36687749 - MGP_NODShiLtJ_P0076505 Slc35b4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077981.1 MGP_NODShiLtJ_G0030739.1 mouse_genomes_project 6 94401863 94500433 - MGP_NODShiLtJ_P0077981 Tet3 protein_coding protein_coding MGP_NODShiLtJ_T0077982.1 MGP_NODShiLtJ_G0030739.1 mouse_genomes_project 6 94438434 94487088 - Tet3 protein_coding processed_transcript MGP_NODShiLtJ_T0077983.1 MGP_NODShiLtJ_G0030739.1 mouse_genomes_project 6 94444364 94504651 - MGP_NODShiLtJ_P0077983 Tet3 protein_coding protein_coding MGP_NODShiLtJ_T0077984.1 MGP_NODShiLtJ_G0030739.1 mouse_genomes_project 6 94482204 94487042 - Tet3 protein_coding retained_intron MGP_NODShiLtJ_T0079488.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136465943 136488908 + MGP_NODShiLtJ_P0079488 Slc6a12 protein_coding protein_coding MGP_NODShiLtJ_T0079489.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136466266 136470458 + MGP_NODShiLtJ_P0079489 Slc6a12 protein_coding protein_coding MGP_NODShiLtJ_T0079490.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136469468 136489311 + MGP_NODShiLtJ_P0079490 Slc6a12 protein_coding protein_coding MGP_NODShiLtJ_T0079491.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136470269 136478173 + MGP_NODShiLtJ_P0079491 Slc6a12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079492.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136470269 136488908 + MGP_NODShiLtJ_P0079492 Slc6a12 protein_coding protein_coding MGP_NODShiLtJ_T0079493.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136479666 136485484 + Slc6a12 protein_coding retained_intron MGP_NODShiLtJ_T0079494.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136479679 136486900 + Slc6a12 protein_coding retained_intron MGP_NODShiLtJ_T0079495.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136479764 136488908 + MGP_NODShiLtJ_P0079495 Slc6a12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079496.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136479764 136488908 + MGP_NODShiLtJ_P0079496 Slc6a12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079497.1 MGP_NODShiLtJ_G0031022.1 mouse_genomes_project 6 136481809 136487430 + Slc6a12 protein_coding retained_intron MGP_NODShiLtJ_T0008713.1 MGP_NODShiLtJ_G0007029.1 mouse_genomes_project 6 167827108 167832424 - Gm43913 lincRNA lincRNA MGP_NODShiLtJ_T0079676.1 MGP_NODShiLtJ_G0031071.1 mouse_genomes_project 6 140517629 140525007 - MGP_NODShiLtJ_P0079676 protein_coding protein_coding MGP_NODShiLtJ_T0079677.1 MGP_NODShiLtJ_G0031071.1 mouse_genomes_project 6 140520257 140520711 - protein_coding processed_transcript MGP_NODShiLtJ_T0079678.1 MGP_NODShiLtJ_G0031071.1 mouse_genomes_project 6 140522804 140531140 - MGP_NODShiLtJ_P0079678 protein_coding protein_coding MGP_NODShiLtJ_T0077061.1 MGP_NODShiLtJ_G0030513.1 mouse_genomes_project 6 53629257 53635261 + MGP_NODShiLtJ_P0077061 Gimap7 protein_coding protein_coding MGP_NODShiLtJ_T0077063.1 MGP_NODShiLtJ_G0030513.1 mouse_genomes_project 6 53629293 53634364 + MGP_NODShiLtJ_P0077063 Gimap7 protein_coding protein_coding MGP_NODShiLtJ_T0077064.1 MGP_NODShiLtJ_G0030513.1 mouse_genomes_project 6 53629301 53630293 + Gimap7 protein_coding retained_intron MGP_NODShiLtJ_T0077056.1 MGP_NODShiLtJ_G0030511.1 mouse_genomes_project 6 53609734 53617391 - MGP_NODShiLtJ_P0077056 Gimap6 protein_coding protein_coding MGP_NODShiLtJ_T0077057.1 MGP_NODShiLtJ_G0030511.1 mouse_genomes_project 6 53609735 53617379 - MGP_NODShiLtJ_P0077057 Gimap6 protein_coding protein_coding MGP_NODShiLtJ_T0077058.1 MGP_NODShiLtJ_G0030511.1 mouse_genomes_project 6 53611898 53617362 - MGP_NODShiLtJ_P0077058 Gimap6 protein_coding protein_coding MGP_NODShiLtJ_T0077059.1 MGP_NODShiLtJ_G0030511.1 mouse_genomes_project 6 53612586 53614401 - Gimap6 protein_coding processed_transcript MGP_NODShiLtJ_T0004846.1 MGP_NODShiLtJ_G0004161.1 mouse_genomes_project 6 5740428 5764541 - Gm16043 antisense antisense MGP_NODShiLtJ_T0008424.1 MGP_NODShiLtJ_G0006816.1 mouse_genomes_project 6 3606391 3659695 - lincRNA lincRNA MGP_NODShiLtJ_T0008425.1 MGP_NODShiLtJ_G0006816.1 mouse_genomes_project 6 3606795 3659861 - lincRNA lincRNA MGP_NODShiLtJ_T0076560.1 MGP_NODShiLtJ_G0030372.1 mouse_genomes_project 6 37433443 37439694 - MGP_NODShiLtJ_P0076560 3110062M04Rik protein_coding protein_coding MGP_NODShiLtJ_T0076561.1 MGP_NODShiLtJ_G0030372.1 mouse_genomes_project 6 37433512 37439733 - MGP_NODShiLtJ_P0076561 3110062M04Rik protein_coding protein_coding MGP_NODShiLtJ_T0076563.1 MGP_NODShiLtJ_G0030372.1 mouse_genomes_project 6 37435367 37439682 - MGP_NODShiLtJ_P0076563 3110062M04Rik protein_coding protein_coding MGP_NODShiLtJ_T0076564.1 MGP_NODShiLtJ_G0030372.1 mouse_genomes_project 6 37436318 37438802 - MGP_NODShiLtJ_P0076564 3110062M04Rik protein_coding protein_coding MGP_NODShiLtJ_T0076565.1 MGP_NODShiLtJ_G0030372.1 mouse_genomes_project 6 37437018 37438653 - 3110062M04Rik protein_coding retained_intron MGP_NODShiLtJ_T0100724.1 MGP_NODShiLtJ_G0039118.1 mouse_genomes_project 6 164066817 164066904 + Gm23498 snoRNA snoRNA MGP_NODShiLtJ_T0078133.1 MGP_NODShiLtJ_G0030767.1 mouse_genomes_project 6 97102683 97106437 - MGP_NODShiLtJ_P0078133 Nat8f5 protein_coding protein_coding MGP_NODShiLtJ_T0102036.1 MGP_NODShiLtJ_G0040203.1 mouse_genomes_project 6 147069163 147091807 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000305.1 MGP_NODShiLtJ_G0000243.1 mouse_genomes_project 6 77466308 77466774 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0015181.1 MGP_NODShiLtJ_G0013289.1 mouse_genomes_project 6 41295513 41295937 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079629.1 MGP_NODShiLtJ_G0031061.1 mouse_genomes_project 6 140223896 140234575 + MGP_NODShiLtJ_P0079629 protein_coding protein_coding MGP_NODShiLtJ_T0010643.1 MGP_NODShiLtJ_G0008776.1 mouse_genomes_project 6 23460770 23460873 - Gm23961 miRNA miRNA MGP_NODShiLtJ_T0078755.1 MGP_NODShiLtJ_G0030892.1 mouse_genomes_project 6 112596387 112658417 - MGP_NODShiLtJ_P0078755 Rybp protein_coding protein_coding MGP_NODShiLtJ_T0078756.1 MGP_NODShiLtJ_G0030892.1 mouse_genomes_project 6 112599282 112600406 - Rybp protein_coding retained_intron MGP_NODShiLtJ_T0078757.1 MGP_NODShiLtJ_G0030892.1 mouse_genomes_project 6 112600368 112656756 - Rybp protein_coding retained_intron MGP_NODShiLtJ_T0015480.1 MGP_NODShiLtJ_G0013588.1 mouse_genomes_project 6 144647926 144648332 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075793.1 MGP_NODShiLtJ_G0030228.1 mouse_genomes_project 6 218771 258779 - MGP_NODShiLtJ_P0075793 Hepacam2 protein_coding protein_coding MGP_NODShiLtJ_T0075794.1 MGP_NODShiLtJ_G0030228.1 mouse_genomes_project 6 219070 251365 - Hepacam2 protein_coding retained_intron MGP_NODShiLtJ_T0075795.1 MGP_NODShiLtJ_G0030228.1 mouse_genomes_project 6 239204 251379 - MGP_NODShiLtJ_P0075795 Hepacam2 protein_coding protein_coding MGP_NODShiLtJ_T0075796.1 MGP_NODShiLtJ_G0030228.1 mouse_genomes_project 6 247269 262479 - MGP_NODShiLtJ_P0075796 Hepacam2 protein_coding protein_coding MGP_NODShiLtJ_T0075797.1 MGP_NODShiLtJ_G0030228.1 mouse_genomes_project 6 247556 251346 - Hepacam2 protein_coding retained_intron MGP_NODShiLtJ_T0080728.1 MGP_NODShiLtJ_G0031315.1 mouse_genomes_project 6 167065463 167297122 - MGP_NODShiLtJ_P0080728 Tmtc1 protein_coding protein_coding MGP_NODShiLtJ_T0080729.1 MGP_NODShiLtJ_G0031315.1 mouse_genomes_project 6 167065463 167297122 - MGP_NODShiLtJ_P0080729 Tmtc1 protein_coding protein_coding MGP_NODShiLtJ_T0080730.1 MGP_NODShiLtJ_G0031315.1 mouse_genomes_project 6 167081625 167294378 - MGP_NODShiLtJ_P0080730 Tmtc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080731.1 MGP_NODShiLtJ_G0031315.1 mouse_genomes_project 6 167263721 167294378 - MGP_NODShiLtJ_P0080731 Tmtc1 protein_coding protein_coding MGP_NODShiLtJ_T0000306.1 MGP_NODShiLtJ_G0000244.1 mouse_genomes_project 6 77820554 77822578 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0076877.1 MGP_NODShiLtJ_G0030460.1 mouse_genomes_project 6 45989242 45990163 - MGP_NODShiLtJ_P0076877 protein_coding protein_coding MGP_NODShiLtJ_T0008661.1 MGP_NODShiLtJ_G0006996.1 mouse_genomes_project 6 145106881 145109861 + Gm26656 lincRNA lincRNA MGP_NODShiLtJ_T0099421.1 MGP_NODShiLtJ_G0037815.1 mouse_genomes_project 6 35479617 35479721 - Gm22321 snRNA snRNA MGP_NODShiLtJ_T0077913.1 MGP_NODShiLtJ_G0030728.1 mouse_genomes_project 6 94135373 94138776 + MGP_NODShiLtJ_P0077913 Mogs protein_coding protein_coding MGP_NODShiLtJ_T0077914.1 MGP_NODShiLtJ_G0030728.1 mouse_genomes_project 6 94136393 94137229 + Mogs protein_coding retained_intron MGP_NODShiLtJ_T0078705.1 MGP_NODShiLtJ_G0030885.1 mouse_genomes_project 6 109988176 110208803 + MGP_NODShiLtJ_P0078705 Mitf protein_coding protein_coding MGP_NODShiLtJ_T0078706.1 MGP_NODShiLtJ_G0030885.1 mouse_genomes_project 6 109988182 110131601 + Mitf protein_coding retained_intron MGP_NODShiLtJ_T0078707.1 MGP_NODShiLtJ_G0030885.1 mouse_genomes_project 6 109988182 110212481 + MGP_NODShiLtJ_P0078707 Mitf protein_coding protein_coding MGP_NODShiLtJ_T0078708.1 MGP_NODShiLtJ_G0030885.1 mouse_genomes_project 6 110118491 110208917 + MGP_NODShiLtJ_P0078708 Mitf protein_coding protein_coding MGP_NODShiLtJ_T0078709.1 MGP_NODShiLtJ_G0030885.1 mouse_genomes_project 6 110130339 110208917 + MGP_NODShiLtJ_P0078709 Mitf protein_coding protein_coding MGP_NODShiLtJ_T0078710.1 MGP_NODShiLtJ_G0030885.1 mouse_genomes_project 6 110181279 110208917 + MGP_NODShiLtJ_P0078710 Mitf protein_coding protein_coding MGP_NODShiLtJ_T0078711.1 MGP_NODShiLtJ_G0030885.1 mouse_genomes_project 6 110181306 110208707 + MGP_NODShiLtJ_P0078711 Mitf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078712.1 MGP_NODShiLtJ_G0030885.1 mouse_genomes_project 6 110181408 110208385 + MGP_NODShiLtJ_P0078712 Mitf protein_coding protein_coding MGP_NODShiLtJ_T0078431.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388385 100398350 + MGP_NODShiLtJ_P0078431 Tpra1 protein_coding protein_coding MGP_NODShiLtJ_T0078432.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388433 100395533 + Tpra1 protein_coding processed_transcript MGP_NODShiLtJ_T0078433.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388451 100392232 + Tpra1 protein_coding retained_intron MGP_NODShiLtJ_T0078434.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388451 100392699 + Tpra1 protein_coding processed_transcript MGP_NODShiLtJ_T0078435.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388467 100398350 + MGP_NODShiLtJ_P0078435 Tpra1 protein_coding protein_coding MGP_NODShiLtJ_T0078436.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388471 100396482 + Tpra1 protein_coding processed_transcript MGP_NODShiLtJ_T0078437.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388476 100396346 + MGP_NODShiLtJ_P0078437 Tpra1 protein_coding protein_coding MGP_NODShiLtJ_T0078438.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388486 100396330 + MGP_NODShiLtJ_P0078438 Tpra1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078439.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100388587 100398350 + MGP_NODShiLtJ_P0078439 Tpra1 protein_coding protein_coding MGP_NODShiLtJ_T0078440.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100391768 100395420 + Tpra1 protein_coding processed_transcript MGP_NODShiLtJ_T0078441.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100392080 100398350 + MGP_NODShiLtJ_P0078441 Tpra1 protein_coding protein_coding MGP_NODShiLtJ_T0078442.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100392089 100393892 + Tpra1 protein_coding processed_transcript MGP_NODShiLtJ_T0078443.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100392091 100397866 + MGP_NODShiLtJ_P0078443 Tpra1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078444.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100392109 100396939 + MGP_NODShiLtJ_P0078444 Tpra1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078445.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100392175 100396767 + MGP_NODShiLtJ_P0078445 Tpra1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078446.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100394106 100398357 + MGP_NODShiLtJ_P0078446 Tpra1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078447.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100394106 100398103 + MGP_NODShiLtJ_P0078447 Tpra1 protein_coding protein_coding MGP_NODShiLtJ_T0078448.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100394120 100397220 + MGP_NODShiLtJ_P0078448 Tpra1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078449.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100394319 100395646 + Tpra1 protein_coding processed_transcript MGP_NODShiLtJ_T0078450.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100394319 100395662 + Tpra1 protein_coding retained_intron MGP_NODShiLtJ_T0078451.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100396276 100397068 + Tpra1 protein_coding retained_intron MGP_NODShiLtJ_T0078452.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100396341 100396617 + Tpra1 protein_coding retained_intron MGP_NODShiLtJ_T0078453.1 MGP_NODShiLtJ_G0030822.1 mouse_genomes_project 6 100396717 100397874 + Tpra1 protein_coding retained_intron MGP_NODShiLtJ_T0002053.1 MGP_NODShiLtJ_G0001965.1 mouse_genomes_project 6 112506170 112506562 - TEC TEC MGP_NODShiLtJ_T0076896.1 MGP_NODShiLtJ_G0030469.1 mouse_genomes_project 6 46406004 46406937 + MGP_NODShiLtJ_P0076896 Olfr450 protein_coding protein_coding MGP_NODShiLtJ_T0001983.1 MGP_NODShiLtJ_G0001895.1 mouse_genomes_project 6 87764905 87767700 - TEC TEC MGP_NODShiLtJ_T0078229.1 MGP_NODShiLtJ_G0030784.1 mouse_genomes_project 6 97984209 97985756 + MGP_NODShiLtJ_P0078229 Asprv1 protein_coding protein_coding MGP_NODShiLtJ_T0002143.1 MGP_NODShiLtJ_G0002055.1 mouse_genomes_project 6 167808411 167809883 - TEC TEC MGP_NODShiLtJ_T0076873.1 MGP_NODShiLtJ_G0030456.1 mouse_genomes_project 6 45913355 45914237 + MGP_NODShiLtJ_P0076873 Tas2r143 protein_coding protein_coding MGP_NODShiLtJ_T0005049.1 MGP_NODShiLtJ_G0004305.1 mouse_genomes_project 6 152675406 152683556 + Gm19434 antisense antisense MGP_NODShiLtJ_T0008709.1 MGP_NODShiLtJ_G0007026.1 mouse_genomes_project 6 167469456 167473423 - Gm6313 lincRNA lincRNA MGP_NODShiLtJ_T0008710.1 MGP_NODShiLtJ_G0007026.1 mouse_genomes_project 6 167469456 167477999 - Gm6313 lincRNA lincRNA MGP_NODShiLtJ_T0008680.1 MGP_NODShiLtJ_G0007005.1 mouse_genomes_project 6 153254884 153266276 + Gm14329 lincRNA lincRNA MGP_NODShiLtJ_T0011525.1 MGP_NODShiLtJ_G0009658.1 mouse_genomes_project 6 33001826 33002056 + Gm27522 misc_RNA misc_RNA MGP_NODShiLtJ_T0080166.1 MGP_NODShiLtJ_G0031192.1 mouse_genomes_project 6 149672890 149673782 + MGP_NODShiLtJ_P0080166 Tas2r120 protein_coding protein_coding MGP_NODShiLtJ_T0008699.1 MGP_NODShiLtJ_G0007019.1 mouse_genomes_project 6 164747103 164749331 - Gm44269 lincRNA lincRNA MGP_NODShiLtJ_T0099455.1 MGP_NODShiLtJ_G0037849.1 mouse_genomes_project 6 135170547 135170654 - Gm25327 snRNA snRNA MGP_NODShiLtJ_T0078848.1 MGP_NODShiLtJ_G0030912.1 mouse_genomes_project 6 126675366 126732380 + MGP_NODShiLtJ_P0078848 Lmcd1 protein_coding protein_coding MGP_NODShiLtJ_T0076189.1 MGP_NODShiLtJ_G0030310.1 mouse_genomes_project 6 25982668 25987989 - MGP_NODShiLtJ_P0076189 Tmem229a protein_coding protein_coding MGP_NODShiLtJ_T0099445.1 MGP_NODShiLtJ_G0037839.1 mouse_genomes_project 6 109893718 109893811 + Gm24565 snRNA snRNA MGP_NODShiLtJ_T0015220.1 MGP_NODShiLtJ_G0013328.1 mouse_genomes_project 6 54002199 54003300 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008696.1 MGP_NODShiLtJ_G0007016.1 mouse_genomes_project 6 163936142 163937459 + Gm15706 lincRNA lincRNA MGP_NODShiLtJ_T0080037.1 MGP_NODShiLtJ_G0031140.1 mouse_genomes_project 6 144992428 145087554 - MGP_NODShiLtJ_P0080037 protein_coding protein_coding MGP_NODShiLtJ_T0080038.1 MGP_NODShiLtJ_G0031140.1 mouse_genomes_project 6 144992428 145087554 - MGP_NODShiLtJ_P0080038 protein_coding protein_coding MGP_NODShiLtJ_T0080039.1 MGP_NODShiLtJ_G0031140.1 mouse_genomes_project 6 144992507 145087521 - MGP_NODShiLtJ_P0080039 protein_coding protein_coding MGP_NODShiLtJ_T0080041.1 MGP_NODShiLtJ_G0031140.1 mouse_genomes_project 6 145009444 145087617 - MGP_NODShiLtJ_P0080041 protein_coding protein_coding MGP_NODShiLtJ_T0078281.1 MGP_NODShiLtJ_G0030793.1 mouse_genomes_project 6 98523519 98727986 - MGP_NODShiLtJ_P0078281 Antxr1 protein_coding protein_coding MGP_NODShiLtJ_T0078282.1 MGP_NODShiLtJ_G0030793.1 mouse_genomes_project 6 98523522 98700109 - MGP_NODShiLtJ_P0078282 Antxr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078283.1 MGP_NODShiLtJ_G0030793.1 mouse_genomes_project 6 98547427 98727946 - MGP_NODShiLtJ_P0078283 Antxr1 protein_coding protein_coding MGP_NODShiLtJ_T0078284.1 MGP_NODShiLtJ_G0030793.1 mouse_genomes_project 6 98568727 98727986 - MGP_NODShiLtJ_P0078284 Antxr1 protein_coding protein_coding MGP_NODShiLtJ_T0078285.1 MGP_NODShiLtJ_G0030793.1 mouse_genomes_project 6 98590688 98661961 - Antxr1 protein_coding processed_transcript MGP_NODShiLtJ_T0078286.1 MGP_NODShiLtJ_G0030793.1 mouse_genomes_project 6 98672276 98728043 - Antxr1 protein_coding retained_intron MGP_NODShiLtJ_T0078486.1 MGP_NODShiLtJ_G0030839.1 mouse_genomes_project 6 101833320 101835075 + MGP_NODShiLtJ_P0078486 protein_coding protein_coding MGP_NODShiLtJ_T0008506.1 MGP_NODShiLtJ_G0006869.1 mouse_genomes_project 6 53432008 53432910 - 1700026J14Rik lincRNA lincRNA MGP_NODShiLtJ_T0099466.1 MGP_NODShiLtJ_G0037860.1 mouse_genomes_project 6 153973957 153974042 + Gm25882 snRNA snRNA MGP_NODShiLtJ_T0001888.1 MGP_NODShiLtJ_G0001800.1 mouse_genomes_project 6 17919298 17920940 - TEC TEC MGP_NODShiLtJ_T0015342.1 MGP_NODShiLtJ_G0013450.1 mouse_genomes_project 6 95965969 95966951 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080593.1 MGP_NODShiLtJ_G0031290.1 mouse_genomes_project 6 163894403 163899067 + MGP_NODShiLtJ_P0080593 Lyrm5 protein_coding protein_coding MGP_NODShiLtJ_T0080594.1 MGP_NODShiLtJ_G0031290.1 mouse_genomes_project 6 163894425 163900217 + MGP_NODShiLtJ_P0080594 Lyrm5 protein_coding protein_coding MGP_NODShiLtJ_T0080595.1 MGP_NODShiLtJ_G0031290.1 mouse_genomes_project 6 163894425 163899814 + MGP_NODShiLtJ_P0080595 Lyrm5 protein_coding protein_coding MGP_NODShiLtJ_T0080596.1 MGP_NODShiLtJ_G0031290.1 mouse_genomes_project 6 163894439 163898243 + Lyrm5 protein_coding processed_transcript MGP_NODShiLtJ_T0080597.1 MGP_NODShiLtJ_G0031290.1 mouse_genomes_project 6 163894444 163899814 + MGP_NODShiLtJ_P0080597 Lyrm5 protein_coding protein_coding MGP_NODShiLtJ_T0080598.1 MGP_NODShiLtJ_G0031290.1 mouse_genomes_project 6 163894444 163899047 + MGP_NODShiLtJ_P0080598 Lyrm5 protein_coding protein_coding MGP_NODShiLtJ_T0080599.1 MGP_NODShiLtJ_G0031290.1 mouse_genomes_project 6 163894455 163899814 + MGP_NODShiLtJ_P0080599 Lyrm5 protein_coding protein_coding MGP_NODShiLtJ_T0080600.1 MGP_NODShiLtJ_G0031290.1 mouse_genomes_project 6 163894469 163899010 + MGP_NODShiLtJ_P0080600 Lyrm5 protein_coding protein_coding MGP_NODShiLtJ_T0002626.1 MGP_NODShiLtJ_G0002509.1 mouse_genomes_project 6 44401172 44401665 + MGP_NODShiLtJ_P0002626 Trbv4 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0018105.1 MGP_NODShiLtJ_G0015496.1 mouse_genomes_project 6 57450660 57456060 + Hoxa11os processed_transcript antisense MGP_NODShiLtJ_T0018106.1 MGP_NODShiLtJ_G0015496.1 mouse_genomes_project 6 57451510 57456038 + Hoxa11os processed_transcript antisense MGP_NODShiLtJ_T0018107.1 MGP_NODShiLtJ_G0015496.1 mouse_genomes_project 6 57452238 57456064 + Hoxa11os processed_transcript antisense MGP_NODShiLtJ_T0018108.1 MGP_NODShiLtJ_G0015496.1 mouse_genomes_project 6 57452258 57456059 + Hoxa11os processed_transcript antisense MGP_NODShiLtJ_T0018109.1 MGP_NODShiLtJ_G0015496.1 mouse_genomes_project 6 57452490 57455649 + Hoxa11os processed_transcript retained_intron MGP_NODShiLtJ_T0018110.1 MGP_NODShiLtJ_G0015496.1 mouse_genomes_project 6 57454690 57456068 + Hoxa11os processed_transcript antisense MGP_NODShiLtJ_T0079484.1 MGP_NODShiLtJ_G0031021.1 mouse_genomes_project 6 136418855 136460603 + MGP_NODShiLtJ_P0079484 Slc6a13 protein_coding protein_coding MGP_NODShiLtJ_T0079485.1 MGP_NODShiLtJ_G0031021.1 mouse_genomes_project 6 136418917 136456460 + Slc6a13 protein_coding retained_intron MGP_NODShiLtJ_T0079486.1 MGP_NODShiLtJ_G0031021.1 mouse_genomes_project 6 136418917 136421929 + Slc6a13 protein_coding retained_intron MGP_NODShiLtJ_T0079487.1 MGP_NODShiLtJ_G0031021.1 mouse_genomes_project 6 136419410 136447213 + MGP_NODShiLtJ_P0079487 Slc6a13 protein_coding protein_coding MGP_NODShiLtJ_T0004929.1 MGP_NODShiLtJ_G0004224.1 mouse_genomes_project 6 94126482 94128929 - Ccdc142os antisense antisense MGP_NODShiLtJ_T0004930.1 MGP_NODShiLtJ_G0004224.1 mouse_genomes_project 6 94126493 94128928 - Ccdc142os antisense antisense MGP_NODShiLtJ_T0004931.1 MGP_NODShiLtJ_G0004224.1 mouse_genomes_project 6 94126741 94128862 - Ccdc142os antisense antisense MGP_NODShiLtJ_T0004932.1 MGP_NODShiLtJ_G0004224.1 mouse_genomes_project 6 94127621 94128929 - Ccdc142os antisense antisense MGP_NODShiLtJ_T0015499.1 MGP_NODShiLtJ_G0013607.1 mouse_genomes_project 6 148940881 148941332 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080648.1 MGP_NODShiLtJ_G0031299.1 mouse_genomes_project 6 165332333 165348963 + MGP_NODShiLtJ_P0080648 Fgfr1op2 protein_coding protein_coding MGP_NODShiLtJ_T0080649.1 MGP_NODShiLtJ_G0031299.1 mouse_genomes_project 6 165332993 165356112 + MGP_NODShiLtJ_P0080649 Fgfr1op2 protein_coding protein_coding MGP_NODShiLtJ_T0080650.1 MGP_NODShiLtJ_G0031299.1 mouse_genomes_project 6 165332993 165356112 + MGP_NODShiLtJ_P0080650 Fgfr1op2 protein_coding protein_coding MGP_NODShiLtJ_T0080651.1 MGP_NODShiLtJ_G0031299.1 mouse_genomes_project 6 165333055 165348963 + MGP_NODShiLtJ_P0080651 Fgfr1op2 protein_coding protein_coding MGP_NODShiLtJ_T0080652.1 MGP_NODShiLtJ_G0031299.1 mouse_genomes_project 6 165333074 165346086 + Fgfr1op2 protein_coding processed_transcript MGP_NODShiLtJ_T0080653.1 MGP_NODShiLtJ_G0031299.1 mouse_genomes_project 6 165333076 165343378 + Fgfr1op2 protein_coding retained_intron MGP_NODShiLtJ_T0080654.1 MGP_NODShiLtJ_G0031299.1 mouse_genomes_project 6 165344389 165354240 + Fgfr1op2 protein_coding processed_transcript MGP_NODShiLtJ_T0010715.1 MGP_NODShiLtJ_G0008848.1 mouse_genomes_project 6 155722840 155722954 - Gm24308 miRNA miRNA MGP_NODShiLtJ_T0098432.1 MGP_NODShiLtJ_G0036833.1 mouse_genomes_project 6 99817929 99818394 - Gm44265 sense_intronic sense_intronic MGP_NODShiLtJ_T0079276.1 MGP_NODShiLtJ_G0030987.1 mouse_genomes_project 6 132909388 132933296 + MGP_NODShiLtJ_P0079276 Rasgef1a protein_coding protein_coding MGP_NODShiLtJ_T0079277.1 MGP_NODShiLtJ_G0030987.1 mouse_genomes_project 6 132909388 132933367 + MGP_NODShiLtJ_P0079277 Rasgef1a protein_coding protein_coding MGP_NODShiLtJ_T0079278.1 MGP_NODShiLtJ_G0030987.1 mouse_genomes_project 6 132920816 132934347 + MGP_NODShiLtJ_P0079278 Rasgef1a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000045.1 MGP_NODShiLtJ_G0000037.1 mouse_genomes_project 6 79450431 79450469 + MGP_NODShiLtJ_P0000045 Igkj3 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0000046.1 MGP_NODShiLtJ_G0000037.1 mouse_genomes_project 6 79450431 79450467 + Igkj3 IG_J_gene processed_transcript MGP_NODShiLtJ_T0076112.1 MGP_NODShiLtJ_G0030289.1 mouse_genomes_project 6 22519101 22545411 + MGP_NODShiLtJ_P0076112 Ing3 protein_coding protein_coding MGP_NODShiLtJ_T0076113.1 MGP_NODShiLtJ_G0030289.1 mouse_genomes_project 6 22519154 22543859 + Ing3 protein_coding retained_intron MGP_NODShiLtJ_T0076114.1 MGP_NODShiLtJ_G0030289.1 mouse_genomes_project 6 22519159 22543460 + MGP_NODShiLtJ_P0076114 Ing3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076115.1 MGP_NODShiLtJ_G0030289.1 mouse_genomes_project 6 22519162 22544276 + MGP_NODShiLtJ_P0076115 Ing3 protein_coding protein_coding MGP_NODShiLtJ_T0076116.1 MGP_NODShiLtJ_G0030289.1 mouse_genomes_project 6 22519175 22539393 + MGP_NODShiLtJ_P0076116 Ing3 protein_coding protein_coding MGP_NODShiLtJ_T0076117.1 MGP_NODShiLtJ_G0030289.1 mouse_genomes_project 6 22519190 22543055 + MGP_NODShiLtJ_P0076117 Ing3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076118.1 MGP_NODShiLtJ_G0030289.1 mouse_genomes_project 6 22519525 22537077 + MGP_NODShiLtJ_P0076118 Ing3 protein_coding protein_coding MGP_NODShiLtJ_T0076119.1 MGP_NODShiLtJ_G0030289.1 mouse_genomes_project 6 22521562 22523762 + Ing3 protein_coding retained_intron MGP_NODShiLtJ_T0001931.1 MGP_NODShiLtJ_G0001843.1 mouse_genomes_project 6 50601289 50604341 + TEC TEC MGP_NODShiLtJ_T0077437.1 MGP_NODShiLtJ_G0030616.1 mouse_genomes_project 6 63788590 63792699 - MGP_NODShiLtJ_P0077437 Vmn1r26 protein_coding protein_coding MGP_NODShiLtJ_T0101988.1 MGP_NODShiLtJ_G0040156.1 mouse_genomes_project 6 46304871 46304935 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0080601.1 MGP_NODShiLtJ_G0031291.1 mouse_genomes_project 6 163899976 163935853 - MGP_NODShiLtJ_P0080601 Kras protein_coding protein_coding MGP_NODShiLtJ_T0080602.1 MGP_NODShiLtJ_G0031291.1 mouse_genomes_project 6 163903278 163915379 - Kras protein_coding processed_transcript MGP_NODShiLtJ_T0080603.1 MGP_NODShiLtJ_G0031291.1 mouse_genomes_project 6 163903522 163935853 - MGP_NODShiLtJ_P0080603 Kras protein_coding protein_coding MGP_NODShiLtJ_T0080604.1 MGP_NODShiLtJ_G0031291.1 mouse_genomes_project 6 163903546 163935791 - MGP_NODShiLtJ_P0080604 Kras protein_coding protein_coding MGP_NODShiLtJ_T0080605.1 MGP_NODShiLtJ_G0031291.1 mouse_genomes_project 6 163903598 163935784 - MGP_NODShiLtJ_P0080605 Kras protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080606.1 MGP_NODShiLtJ_G0031291.1 mouse_genomes_project 6 163903912 163909195 - Kras protein_coding retained_intron MGP_NODShiLtJ_T0080607.1 MGP_NODShiLtJ_G0031291.1 mouse_genomes_project 6 163932314 163935816 - MGP_NODShiLtJ_P0080607 Kras protein_coding protein_coding MGP_NODShiLtJ_T0015427.1 MGP_NODShiLtJ_G0013535.1 mouse_genomes_project 6 129652995 129653326 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015390.1 MGP_NODShiLtJ_G0013498.1 mouse_genomes_project 6 114204728 114205184 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077715.1 MGP_NODShiLtJ_G0030684.1 mouse_genomes_project 6 81327191 81343399 + MGP_NODShiLtJ_P0077715 Ggcx protein_coding protein_coding MGP_NODShiLtJ_T0077716.1 MGP_NODShiLtJ_G0030684.1 mouse_genomes_project 6 81327224 81343239 + MGP_NODShiLtJ_P0077716 Ggcx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077717.1 MGP_NODShiLtJ_G0030684.1 mouse_genomes_project 6 81330720 81343075 + MGP_NODShiLtJ_P0077717 Ggcx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077718.1 MGP_NODShiLtJ_G0030684.1 mouse_genomes_project 6 81330771 81336916 + MGP_NODShiLtJ_P0077718 Ggcx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077719.1 MGP_NODShiLtJ_G0030684.1 mouse_genomes_project 6 81339510 81342093 + MGP_NODShiLtJ_P0077719 Ggcx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076830.1 MGP_NODShiLtJ_G0030447.1 mouse_genomes_project 6 45644586 45645546 + MGP_NODShiLtJ_P0076830 Tas2r139 protein_coding protein_coding MGP_NODShiLtJ_T0077546.1 MGP_NODShiLtJ_G0030649.1 mouse_genomes_project 6 74903771 74905003 - MGP_NODShiLtJ_P0077546 Vmn1r39 protein_coding protein_coding MGP_NODShiLtJ_T0015192.1 MGP_NODShiLtJ_G0013300.1 mouse_genomes_project 6 44948592 44949039 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011541.1 MGP_NODShiLtJ_G0009674.1 mouse_genomes_project 6 57470841 57470900 + Gm27280 misc_RNA misc_RNA MGP_NODShiLtJ_T0100663.1 MGP_NODShiLtJ_G0039057.1 mouse_genomes_project 6 45786672 45786750 + Gm25108 snoRNA snoRNA MGP_NODShiLtJ_T0078360.1 MGP_NODShiLtJ_G0030812.1 mouse_genomes_project 6 99652960 99667075 + MGP_NODShiLtJ_P0078360 Gata2 protein_coding protein_coding MGP_NODShiLtJ_T0078361.1 MGP_NODShiLtJ_G0030812.1 mouse_genomes_project 6 99657874 99667073 + MGP_NODShiLtJ_P0078361 Gata2 protein_coding protein_coding MGP_NODShiLtJ_T0078362.1 MGP_NODShiLtJ_G0030812.1 mouse_genomes_project 6 99657874 99659706 + MGP_NODShiLtJ_P0078362 Gata2 protein_coding protein_coding MGP_NODShiLtJ_T0078363.1 MGP_NODShiLtJ_G0030812.1 mouse_genomes_project 6 99660961 99662684 + Gata2 protein_coding retained_intron MGP_NODShiLtJ_T0078364.1 MGP_NODShiLtJ_G0030812.1 mouse_genomes_project 6 99664487 99665814 + Gata2 protein_coding retained_intron MGP_NODShiLtJ_T0078510.1 MGP_NODShiLtJ_G0030846.1 mouse_genomes_project 6 102056233 102133855 + Aldh1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0078511.1 MGP_NODShiLtJ_G0030846.1 mouse_genomes_project 6 102125283 102175776 + MGP_NODShiLtJ_P0078511 Aldh1l1 protein_coding protein_coding MGP_NODShiLtJ_T0078512.1 MGP_NODShiLtJ_G0030846.1 mouse_genomes_project 6 102125299 102174742 + MGP_NODShiLtJ_P0078512 Aldh1l1 protein_coding protein_coding MGP_NODShiLtJ_T0078513.1 MGP_NODShiLtJ_G0030846.1 mouse_genomes_project 6 102125337 102134430 + MGP_NODShiLtJ_P0078513 Aldh1l1 protein_coding protein_coding MGP_NODShiLtJ_T0078514.1 MGP_NODShiLtJ_G0030846.1 mouse_genomes_project 6 102125342 102174733 + MGP_NODShiLtJ_P0078514 Aldh1l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078515.1 MGP_NODShiLtJ_G0030846.1 mouse_genomes_project 6 102142153 102145332 + Aldh1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0078516.1 MGP_NODShiLtJ_G0030846.1 mouse_genomes_project 6 102164922 102172647 + Aldh1l1 protein_coding retained_intron MGP_NODShiLtJ_T0077107.1 MGP_NODShiLtJ_G0030524.1 mouse_genomes_project 6 53995566 54009876 + MGP_NODShiLtJ_P0077107 Malsu1 protein_coding protein_coding MGP_NODShiLtJ_T0077108.1 MGP_NODShiLtJ_G0030524.1 mouse_genomes_project 6 53995619 54009876 + MGP_NODShiLtJ_P0077108 Malsu1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077109.1 MGP_NODShiLtJ_G0030524.1 mouse_genomes_project 6 53995663 54001867 + Malsu1 protein_coding processed_transcript MGP_NODShiLtJ_T0077110.1 MGP_NODShiLtJ_G0030524.1 mouse_genomes_project 6 53995845 54006659 + Malsu1 protein_coding processed_transcript MGP_NODShiLtJ_T0077111.1 MGP_NODShiLtJ_G0030524.1 mouse_genomes_project 6 54005709 54007803 + Malsu1 protein_coding retained_intron MGP_NODShiLtJ_T0077479.1 MGP_NODShiLtJ_G0030629.1 mouse_genomes_project 6 67350230 67351325 - MGP_NODShiLtJ_P0077479 Mageb16 protein_coding protein_coding MGP_NODShiLtJ_T0008598.1 MGP_NODShiLtJ_G0006941.1 mouse_genomes_project 6 102048229 102049450 + Gm44421 lincRNA lincRNA MGP_NODShiLtJ_T0079607.1 MGP_NODShiLtJ_G0031055.1 mouse_genomes_project 6 139992903 140030296 + MGP_NODShiLtJ_P0079607 Cd163 protein_coding protein_coding MGP_NODShiLtJ_T0079608.1 MGP_NODShiLtJ_G0031055.1 mouse_genomes_project 6 139992947 140030296 + MGP_NODShiLtJ_P0079608 Cd163 protein_coding protein_coding MGP_NODShiLtJ_T0079609.1 MGP_NODShiLtJ_G0031055.1 mouse_genomes_project 6 140020254 140030288 + Cd163 protein_coding retained_intron MGP_NODShiLtJ_T0015534.1 MGP_NODShiLtJ_G0013642.1 mouse_genomes_project 6 165196887 165197169 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077065.1 MGP_NODShiLtJ_G0030514.1 mouse_genomes_project 6 53652146 53658057 + MGP_NODShiLtJ_P0077065 Gimap1 protein_coding protein_coding MGP_NODShiLtJ_T0077067.1 MGP_NODShiLtJ_G0030514.1 mouse_genomes_project 6 53652165 53655796 + MGP_NODShiLtJ_P0077067 Gimap1 protein_coding protein_coding MGP_NODShiLtJ_T0077068.1 MGP_NODShiLtJ_G0030514.1 mouse_genomes_project 6 53652168 53658061 + MGP_NODShiLtJ_P0077068 Gimap1 protein_coding protein_coding MGP_NODShiLtJ_T0077069.1 MGP_NODShiLtJ_G0030514.1 mouse_genomes_project 6 53652179 53653132 + Gimap1 protein_coding retained_intron MGP_NODShiLtJ_T0077070.1 MGP_NODShiLtJ_G0030514.1 mouse_genomes_project 6 53652199 53654869 + Gimap1 protein_coding retained_intron MGP_NODShiLtJ_T0077071.1 MGP_NODShiLtJ_G0030514.1 mouse_genomes_project 6 53655254 53658062 + Gimap1 protein_coding retained_intron MGP_NODShiLtJ_T0077838.1 MGP_NODShiLtJ_G0030712.1 mouse_genomes_project 6 93343907 93346939 + Tacr1 protein_coding retained_intron MGP_NODShiLtJ_T0077839.1 MGP_NODShiLtJ_G0030712.1 mouse_genomes_project 6 93344048 93514338 + MGP_NODShiLtJ_P0077839 Tacr1 protein_coding protein_coding MGP_NODShiLtJ_T0077840.1 MGP_NODShiLtJ_G0030712.1 mouse_genomes_project 6 93344360 93514343 + MGP_NODShiLtJ_P0077840 Tacr1 protein_coding protein_coding MGP_NODShiLtJ_T0076090.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 17850343 17914769 - Cttnbp2 protein_coding retained_intron MGP_NODShiLtJ_T0076091.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 17850430 17924140 - MGP_NODShiLtJ_P0076091 Cttnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0076092.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 17850572 18027160 - MGP_NODShiLtJ_P0076092 Cttnbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076093.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 17851085 18027232 - MGP_NODShiLtJ_P0076093 Cttnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0076094.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 17877342 17895071 - MGP_NODShiLtJ_P0076094 Cttnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0076095.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 17921628 18027210 - Cttnbp2 protein_coding retained_intron MGP_NODShiLtJ_T0076096.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 17924939 18025515 - MGP_NODShiLtJ_P0076096 Cttnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0076097.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 17940145 18013594 - MGP_NODShiLtJ_P0076097 Cttnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0076098.1 MGP_NODShiLtJ_G0030284.1 mouse_genomes_project 6 18013163 18027254 - Cttnbp2 protein_coding retained_intron MGP_NODShiLtJ_T0077942.1 MGP_NODShiLtJ_G0030733.1 mouse_genomes_project 6 94177391 94185350 + MGP_NODShiLtJ_P0077942 1700003E16Rik protein_coding protein_coding MGP_NODShiLtJ_T0077943.1 MGP_NODShiLtJ_G0030733.1 mouse_genomes_project 6 94177488 94185296 + MGP_NODShiLtJ_P0077943 1700003E16Rik protein_coding protein_coding MGP_NODShiLtJ_T0010661.1 MGP_NODShiLtJ_G0008794.1 mouse_genomes_project 6 53309103 53309177 + Gm24325 miRNA miRNA MGP_NODShiLtJ_T0015245.1 MGP_NODShiLtJ_G0013353.1 mouse_genomes_project 6 64324228 64324597 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001892.1 MGP_NODShiLtJ_G0001804.1 mouse_genomes_project 6 25620803 25623734 - TEC TEC MGP_NODShiLtJ_T0076574.1 MGP_NODShiLtJ_G0030374.1 mouse_genomes_project 6 37484841 37509515 + MGP_NODShiLtJ_P0076574 Stra8 protein_coding protein_coding MGP_NODShiLtJ_T0076575.1 MGP_NODShiLtJ_G0030374.1 mouse_genomes_project 6 37485638 37509513 + MGP_NODShiLtJ_P0076575 Stra8 protein_coding protein_coding MGP_NODShiLtJ_T0076576.1 MGP_NODShiLtJ_G0030374.1 mouse_genomes_project 6 37485682 37503532 + MGP_NODShiLtJ_P0076576 Stra8 protein_coding protein_coding MGP_NODShiLtJ_T0076577.1 MGP_NODShiLtJ_G0030374.1 mouse_genomes_project 6 37485688 37509513 + MGP_NODShiLtJ_P0076577 Stra8 protein_coding protein_coding MGP_NODShiLtJ_T0008454.1 MGP_NODShiLtJ_G0006837.1 mouse_genomes_project 6 32536516 32567449 + 1700095J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008455.1 MGP_NODShiLtJ_G0006837.1 mouse_genomes_project 6 32536532 32539680 + 1700095J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0098065.1 MGP_NODShiLtJ_G0036477.1 mouse_genomes_project 6 100780257 100780392 - Gm25961 rRNA rRNA MGP_NODShiLtJ_T0002024.1 MGP_NODShiLtJ_G0001936.1 mouse_genomes_project 6 99675813 99676071 - TEC TEC MGP_NODShiLtJ_T0002030.1 MGP_NODShiLtJ_G0001942.1 mouse_genomes_project 6 100416884 100419814 + TEC TEC MGP_NODShiLtJ_T0079586.1 MGP_NODShiLtJ_G0031047.1 mouse_genomes_project 6 138709201 138728137 + MGP_NODShiLtJ_P0079586 Clec4n protein_coding protein_coding MGP_NODShiLtJ_T0079587.1 MGP_NODShiLtJ_G0031047.1 mouse_genomes_project 6 138709212 138728135 + MGP_NODShiLtJ_P0079587 Clec4n protein_coding protein_coding MGP_NODShiLtJ_T0079588.1 MGP_NODShiLtJ_G0031047.1 mouse_genomes_project 6 138709215 138710188 + Clec4n protein_coding processed_transcript MGP_NODShiLtJ_T0079589.1 MGP_NODShiLtJ_G0031047.1 mouse_genomes_project 6 138709215 138728135 + MGP_NODShiLtJ_P0079589 Clec4n protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079590.1 MGP_NODShiLtJ_G0031047.1 mouse_genomes_project 6 138709215 138728135 + MGP_NODShiLtJ_P0079590 Clec4n protein_coding protein_coding MGP_NODShiLtJ_T0079591.1 MGP_NODShiLtJ_G0031047.1 mouse_genomes_project 6 138709376 138727701 + MGP_NODShiLtJ_P0079591 Clec4n protein_coding protein_coding MGP_NODShiLtJ_T0002137.1 MGP_NODShiLtJ_G0002049.1 mouse_genomes_project 6 165599387 165600314 - TEC TEC MGP_NODShiLtJ_T0004978.1 MGP_NODShiLtJ_G0004251.1 mouse_genomes_project 6 102767854 102768398 - Gm14573 antisense antisense MGP_NODShiLtJ_T0079929.1 MGP_NODShiLtJ_G0031116.1 mouse_genomes_project 6 142930320 142959392 + D6Wsu163e protein_coding retained_intron MGP_NODShiLtJ_T0079930.1 MGP_NODShiLtJ_G0031116.1 mouse_genomes_project 6 142930324 142965617 + MGP_NODShiLtJ_P0079930 D6Wsu163e protein_coding protein_coding MGP_NODShiLtJ_T0079931.1 MGP_NODShiLtJ_G0031116.1 mouse_genomes_project 6 142930329 142934132 + D6Wsu163e protein_coding retained_intron MGP_NODShiLtJ_T0079932.1 MGP_NODShiLtJ_G0031116.1 mouse_genomes_project 6 142930333 142939000 + D6Wsu163e protein_coding retained_intron MGP_NODShiLtJ_T0079933.1 MGP_NODShiLtJ_G0031116.1 mouse_genomes_project 6 142930387 142936321 + MGP_NODShiLtJ_P0079933 D6Wsu163e protein_coding protein_coding MGP_NODShiLtJ_T0079934.1 MGP_NODShiLtJ_G0031116.1 mouse_genomes_project 6 142941794 142946597 + D6Wsu163e protein_coding retained_intron MGP_NODShiLtJ_T0079935.1 MGP_NODShiLtJ_G0031116.1 mouse_genomes_project 6 142964144 142965339 + D6Wsu163e protein_coding retained_intron MGP_NODShiLtJ_T0008640.1 MGP_NODShiLtJ_G0006975.1 mouse_genomes_project 6 132719353 132719674 + Gm29509 lincRNA lincRNA MGP_NODShiLtJ_T0004927.1 MGP_NODShiLtJ_G0004222.1 mouse_genomes_project 6 92973965 92976076 - Gm15864 antisense antisense MGP_NODShiLtJ_T0100652.1 MGP_NODShiLtJ_G0039046.1 mouse_genomes_project 6 11568212 11568341 + Gm24985 snoRNA snoRNA MGP_NODShiLtJ_T0008655.1 MGP_NODShiLtJ_G0006990.1 mouse_genomes_project 6 143685264 143698788 + Gm43634 lincRNA lincRNA MGP_NODShiLtJ_T0079568.1 MGP_NODShiLtJ_G0031039.1 mouse_genomes_project 6 138287327 138296341 - MGP_NODShiLtJ_P0079568 C3ar1 protein_coding protein_coding MGP_NODShiLtJ_T0008628.1 MGP_NODShiLtJ_G0006965.1 mouse_genomes_project 6 127389241 127391535 + Gm44081 lincRNA lincRNA MGP_NODShiLtJ_T0078220.1 MGP_NODShiLtJ_G0030782.1 mouse_genomes_project 6 97778311 97811163 + MGP_NODShiLtJ_P0078220 C87436 protein_coding protein_coding MGP_NODShiLtJ_T0078221.1 MGP_NODShiLtJ_G0030782.1 mouse_genomes_project 6 97778326 97785962 + MGP_NODShiLtJ_P0078221 C87436 protein_coding protein_coding MGP_NODShiLtJ_T0078222.1 MGP_NODShiLtJ_G0030782.1 mouse_genomes_project 6 97778629 97811163 + MGP_NODShiLtJ_P0078222 C87436 protein_coding protein_coding MGP_NODShiLtJ_T0078223.1 MGP_NODShiLtJ_G0030782.1 mouse_genomes_project 6 97778629 97811163 + MGP_NODShiLtJ_P0078223 C87436 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078224.1 MGP_NODShiLtJ_G0030782.1 mouse_genomes_project 6 97778645 97779425 + C87436 protein_coding processed_transcript MGP_NODShiLtJ_T0078225.1 MGP_NODShiLtJ_G0030782.1 mouse_genomes_project 6 97778664 97811163 + MGP_NODShiLtJ_P0078225 C87436 protein_coding protein_coding MGP_NODShiLtJ_T0078226.1 MGP_NODShiLtJ_G0030782.1 mouse_genomes_project 6 97783645 97815098 + MGP_NODShiLtJ_P0078226 C87436 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078227.1 MGP_NODShiLtJ_G0030782.1 mouse_genomes_project 6 97804820 97810722 + C87436 protein_coding processed_transcript MGP_NODShiLtJ_T0008510.1 MGP_NODShiLtJ_G0006873.1 mouse_genomes_project 6 53781076 53786822 + Gm7932 lincRNA lincRNA MGP_NODShiLtJ_T0008511.1 MGP_NODShiLtJ_G0006873.1 mouse_genomes_project 6 53781171 53785183 + Gm7932 lincRNA lincRNA MGP_NODShiLtJ_T0080131.1 MGP_NODShiLtJ_G0031174.1 mouse_genomes_project 6 146539489 146554695 - MGP_NODShiLtJ_P0080131 protein_coding protein_coding MGP_NODShiLtJ_T0002023.1 MGP_NODShiLtJ_G0001935.1 mouse_genomes_project 6 99491643 99495576 - TEC TEC MGP_NODShiLtJ_T0015515.1 MGP_NODShiLtJ_G0013623.1 mouse_genomes_project 6 153931315 153932501 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099437.1 MGP_NODShiLtJ_G0037831.1 mouse_genomes_project 6 89163191 89163355 + Gm23727 snRNA snRNA MGP_NODShiLtJ_T0002019.1 MGP_NODShiLtJ_G0001931.1 mouse_genomes_project 6 99267654 99270176 - TEC TEC MGP_NODShiLtJ_T0015296.1 MGP_NODShiLtJ_G0013404.1 mouse_genomes_project 6 75581884 75582467 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076357.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256481 32365456 + MGP_NODShiLtJ_P0076357 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076358.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256484 32306480 + MGP_NODShiLtJ_P0076358 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076359.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256495 32365179 + MGP_NODShiLtJ_P0076359 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076360.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256522 32306813 + Nrf1 protein_coding retained_intron MGP_NODShiLtJ_T0076361.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256524 32356956 + MGP_NODShiLtJ_P0076361 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076362.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256535 32303257 + MGP_NODShiLtJ_P0076362 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076363.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256538 32364514 + MGP_NODShiLtJ_P0076363 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076364.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256560 32364509 + MGP_NODShiLtJ_P0076364 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076365.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256565 32357293 + MGP_NODShiLtJ_P0076365 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076366.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256565 32340256 + MGP_NODShiLtJ_P0076366 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076367.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32256644 32297303 + MGP_NODShiLtJ_P0076367 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076368.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32284251 32339571 + MGP_NODShiLtJ_P0076368 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076369.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32297153 32356951 + MGP_NODShiLtJ_P0076369 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076370.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32297159 32356951 + MGP_NODShiLtJ_P0076370 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076371.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32297159 32363665 + MGP_NODShiLtJ_P0076371 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076372.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32297159 32339215 + MGP_NODShiLtJ_P0076372 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076373.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32297159 32339215 + MGP_NODShiLtJ_P0076373 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0076374.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32297198 32298263 + Nrf1 protein_coding retained_intron MGP_NODShiLtJ_T0076375.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32305687 32325215 + Nrf1 protein_coding processed_transcript MGP_NODShiLtJ_T0076376.1 MGP_NODShiLtJ_G0030341.1 mouse_genomes_project 6 32325203 32353000 + MGP_NODShiLtJ_P0076376 Nrf1 protein_coding protein_coding MGP_NODShiLtJ_T0080111.1 MGP_NODShiLtJ_G0031163.1 mouse_genomes_project 6 146097914 146115501 - MGP_NODShiLtJ_P0080111 protein_coding protein_coding MGP_NODShiLtJ_T0080113.1 MGP_NODShiLtJ_G0031163.1 mouse_genomes_project 6 146110515 146115456 - MGP_NODShiLtJ_P0080113 protein_coding protein_coding MGP_NODShiLtJ_T0080114.1 MGP_NODShiLtJ_G0031163.1 mouse_genomes_project 6 146110516 146115501 - MGP_NODShiLtJ_P0080114 protein_coding protein_coding MGP_NODShiLtJ_T0080115.1 MGP_NODShiLtJ_G0031163.1 mouse_genomes_project 6 146110540 146115438 - MGP_NODShiLtJ_P0080115 protein_coding protein_coding MGP_NODShiLtJ_T0015483.1 MGP_NODShiLtJ_G0013591.1 mouse_genomes_project 6 144816780 144816931 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015415.1 MGP_NODShiLtJ_G0013523.1 mouse_genomes_project 6 127423768 127423939 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077637.1 MGP_NODShiLtJ_G0030671.1 mouse_genomes_project 6 80658612 80670840 - MGP_NODShiLtJ_P0077637 Mrpl35 protein_coding protein_coding MGP_NODShiLtJ_T0077638.1 MGP_NODShiLtJ_G0030671.1 mouse_genomes_project 6 80663138 80670793 - MGP_NODShiLtJ_P0077638 Mrpl35 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077639.1 MGP_NODShiLtJ_G0030671.1 mouse_genomes_project 6 80664647 80674083 - Mrpl35 protein_coding processed_transcript MGP_NODShiLtJ_T0015419.1 MGP_NODShiLtJ_G0013527.1 mouse_genomes_project 6 127924701 127925111 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015108.1 MGP_NODShiLtJ_G0013216.1 mouse_genomes_project 6 1154492 1154739 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077897.1 MGP_NODShiLtJ_G0030723.1 mouse_genomes_project 6 94079884 94083051 + MGP_NODShiLtJ_P0077897 Pcgf1 protein_coding protein_coding MGP_NODShiLtJ_T0077898.1 MGP_NODShiLtJ_G0030723.1 mouse_genomes_project 6 94080361 94084911 + MGP_NODShiLtJ_P0077898 Pcgf1 protein_coding protein_coding MGP_NODShiLtJ_T0077899.1 MGP_NODShiLtJ_G0030723.1 mouse_genomes_project 6 94080405 94084903 + MGP_NODShiLtJ_P0077899 Pcgf1 protein_coding protein_coding MGP_NODShiLtJ_T0077900.1 MGP_NODShiLtJ_G0030723.1 mouse_genomes_project 6 94080437 94084918 + MGP_NODShiLtJ_P0077900 Pcgf1 protein_coding protein_coding MGP_NODShiLtJ_T0077901.1 MGP_NODShiLtJ_G0030723.1 mouse_genomes_project 6 94080645 94084813 + MGP_NODShiLtJ_P0077901 Pcgf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077902.1 MGP_NODShiLtJ_G0030723.1 mouse_genomes_project 6 94080706 94084813 + MGP_NODShiLtJ_P0077902 Pcgf1 protein_coding protein_coding MGP_NODShiLtJ_T0077903.1 MGP_NODShiLtJ_G0030723.1 mouse_genomes_project 6 94080733 94083766 + Pcgf1 protein_coding retained_intron MGP_NODShiLtJ_T0077904.1 MGP_NODShiLtJ_G0030723.1 mouse_genomes_project 6 94084075 94084910 + Pcgf1 protein_coding retained_intron MGP_NODShiLtJ_T0076410.1 MGP_NODShiLtJ_G0030347.1 mouse_genomes_project 6 32791403 32816950 + MGP_NODShiLtJ_P0076410 Cpa2 protein_coding protein_coding MGP_NODShiLtJ_T0076411.1 MGP_NODShiLtJ_G0030347.1 mouse_genomes_project 6 32791463 32794293 + Cpa2 protein_coding retained_intron MGP_NODShiLtJ_T0076412.1 MGP_NODShiLtJ_G0030347.1 mouse_genomes_project 6 32791491 32796931 + Cpa2 protein_coding processed_transcript MGP_NODShiLtJ_T0076413.1 MGP_NODShiLtJ_G0030347.1 mouse_genomes_project 6 32793028 32794813 + Cpa2 protein_coding retained_intron MGP_NODShiLtJ_T0076414.1 MGP_NODShiLtJ_G0030347.1 mouse_genomes_project 6 32793736 32802566 + Cpa2 protein_coding retained_intron MGP_NODShiLtJ_T0076415.1 MGP_NODShiLtJ_G0030347.1 mouse_genomes_project 6 32794305 32799795 + Cpa2 protein_coding retained_intron MGP_NODShiLtJ_T0076416.1 MGP_NODShiLtJ_G0030347.1 mouse_genomes_project 6 32796462 32796976 + Cpa2 protein_coding processed_transcript MGP_NODShiLtJ_T0076417.1 MGP_NODShiLtJ_G0030347.1 mouse_genomes_project 6 32802412 32816722 + Cpa2 protein_coding retained_intron MGP_NODShiLtJ_T0077545.1 MGP_NODShiLtJ_G0030648.1 mouse_genomes_project 6 74872908 74873944 - MGP_NODShiLtJ_P0077545 Vmn1r38 protein_coding protein_coding MGP_NODShiLtJ_T0000219.1 MGP_NODShiLtJ_G0000159.1 mouse_genomes_project 6 79417246 79425320 + MGP_NODShiLtJ_P0000219 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0079007.1 MGP_NODShiLtJ_G0030938.1 mouse_genomes_project 6 128089782 128093737 - MGP_NODShiLtJ_P0079007 Fancd2os protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079008.1 MGP_NODShiLtJ_G0030938.1 mouse_genomes_project 6 128089783 128093737 - MGP_NODShiLtJ_P0079008 Fancd2os protein_coding protein_coding MGP_NODShiLtJ_T0008462.1 MGP_NODShiLtJ_G0006843.1 mouse_genomes_project 6 33396244 33398205 + Gm13833 lincRNA lincRNA MGP_NODShiLtJ_T0077022.1 MGP_NODShiLtJ_G0030501.1 mouse_genomes_project 6 53466268 53469223 - Rarres2 protein_coding retained_intron MGP_NODShiLtJ_T0077023.1 MGP_NODShiLtJ_G0030501.1 mouse_genomes_project 6 53466268 53469265 - MGP_NODShiLtJ_P0077023 Rarres2 protein_coding protein_coding MGP_NODShiLtJ_T0077024.1 MGP_NODShiLtJ_G0030501.1 mouse_genomes_project 6 53466268 53469332 - MGP_NODShiLtJ_P0077024 Rarres2 protein_coding protein_coding MGP_NODShiLtJ_T0077025.1 MGP_NODShiLtJ_G0030501.1 mouse_genomes_project 6 53466268 53469364 - MGP_NODShiLtJ_P0077025 Rarres2 protein_coding protein_coding MGP_NODShiLtJ_T0077026.1 MGP_NODShiLtJ_G0030501.1 mouse_genomes_project 6 53466282 53469366 - MGP_NODShiLtJ_P0077026 Rarres2 protein_coding protein_coding MGP_NODShiLtJ_T0099467.1 MGP_NODShiLtJ_G0037861.1 mouse_genomes_project 6 167987421 167987528 - Gm22578 snRNA snRNA MGP_NODShiLtJ_T0018126.1 MGP_NODShiLtJ_G0015503.1 mouse_genomes_project 6 75000073 75000878 - 4930597O21Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018127.1 MGP_NODShiLtJ_G0015503.1 mouse_genomes_project 6 75000075 75002724 - 4930597O21Rik processed_transcript bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0076775.1 MGP_NODShiLtJ_G0030422.1 mouse_genomes_project 6 43831116 43842785 - MGP_NODShiLtJ_P0076775 Clec5a protein_coding protein_coding MGP_NODShiLtJ_T0076776.1 MGP_NODShiLtJ_G0030422.1 mouse_genomes_project 6 43832969 43842803 - Clec5a protein_coding processed_transcript MGP_NODShiLtJ_T0076777.1 MGP_NODShiLtJ_G0030422.1 mouse_genomes_project 6 43834102 43842777 - MGP_NODShiLtJ_P0076777 Clec5a protein_coding protein_coding MGP_NODShiLtJ_T0076778.1 MGP_NODShiLtJ_G0030422.1 mouse_genomes_project 6 43834212 43842772 - MGP_NODShiLtJ_P0076778 Clec5a protein_coding protein_coding MGP_NODShiLtJ_T0100696.1 MGP_NODShiLtJ_G0039090.1 mouse_genomes_project 6 109708175 109708305 - Gm25852 snoRNA snoRNA MGP_NODShiLtJ_T0101984.1 MGP_NODShiLtJ_G0040152.1 mouse_genomes_project 6 44934579 44935791 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0077810.1 MGP_NODShiLtJ_G0030705.1 mouse_genomes_project 6 88568780 88574752 + MGP_NODShiLtJ_P0077810 Reg1 protein_coding protein_coding MGP_NODShiLtJ_T0077811.1 MGP_NODShiLtJ_G0030705.1 mouse_genomes_project 6 88568840 88574752 + MGP_NODShiLtJ_P0077811 Reg1 protein_coding protein_coding MGP_NODShiLtJ_T0077812.1 MGP_NODShiLtJ_G0030705.1 mouse_genomes_project 6 88572067 88574751 + MGP_NODShiLtJ_P0077812 Reg1 protein_coding protein_coding MGP_NODShiLtJ_T0076780.1 MGP_NODShiLtJ_G0030424.1 mouse_genomes_project 6 43914295 44080657 + MGP_NODShiLtJ_P0076780 Mgam protein_coding protein_coding MGP_NODShiLtJ_T0076781.1 MGP_NODShiLtJ_G0030424.1 mouse_genomes_project 6 43914295 43947304 + MGP_NODShiLtJ_P0076781 Mgam protein_coding protein_coding MGP_NODShiLtJ_T0076782.1 MGP_NODShiLtJ_G0030424.1 mouse_genomes_project 6 43914295 44080657 + MGP_NODShiLtJ_P0076782 Mgam protein_coding protein_coding MGP_NODShiLtJ_T0076783.1 MGP_NODShiLtJ_G0030424.1 mouse_genomes_project 6 43931328 44080660 + MGP_NODShiLtJ_P0076783 Mgam protein_coding unknown_likely_coding MGP_NODShiLtJ_T0076784.1 MGP_NODShiLtJ_G0030424.1 mouse_genomes_project 6 43931328 44080660 + MGP_NODShiLtJ_P0076784 Mgam protein_coding unknown_likely_coding MGP_NODShiLtJ_T0076785.1 MGP_NODShiLtJ_G0030424.1 mouse_genomes_project 6 43995780 44079989 + MGP_NODShiLtJ_P0076785 Mgam protein_coding protein_coding MGP_NODShiLtJ_T0076786.1 MGP_NODShiLtJ_G0030424.1 mouse_genomes_project 6 44058938 44080648 + Mgam protein_coding processed_transcript MGP_NODShiLtJ_T0076787.1 MGP_NODShiLtJ_G0030424.1 mouse_genomes_project 6 44060573 44061675 + Mgam protein_coding processed_transcript MGP_NODShiLtJ_T0015215.1 MGP_NODShiLtJ_G0013323.1 mouse_genomes_project 6 53879962 53880635 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011519.1 MGP_NODShiLtJ_G0009652.1 mouse_genomes_project 6 17115776 17115963 + Gm28008 misc_RNA misc_RNA MGP_NODShiLtJ_T0080252.1 MGP_NODShiLtJ_G0031224.1 mouse_genomes_project 6 152543618 152563759 + MGP_NODShiLtJ_P0080252 Gprc5a protein_coding protein_coding MGP_NODShiLtJ_T0008644.1 MGP_NODShiLtJ_G0006979.1 mouse_genomes_project 6 134846308 134852794 - 4930540M05Rik lincRNA lincRNA MGP_NODShiLtJ_T0002449.1 MGP_NODShiLtJ_G0002356.1 mouse_genomes_project 6 45003556 45003570 + MGP_NODShiLtJ_P0002449 Trbd2 TR_D_gene TR_D_gene MGP_NODShiLtJ_T0008668.1 MGP_NODShiLtJ_G0006998.1 mouse_genomes_project 6 148747785 148749322 - lincRNA lincRNA MGP_NODShiLtJ_T0002101.1 MGP_NODShiLtJ_G0002013.1 mouse_genomes_project 6 143854552 143857320 - TEC TEC MGP_NODShiLtJ_T0080181.1 MGP_NODShiLtJ_G0031207.1 mouse_genomes_project 6 150139157 150140194 - MGP_NODShiLtJ_P0080181 Tas2r131 protein_coding protein_coding MGP_NODShiLtJ_T0008613.1 MGP_NODShiLtJ_G0006952.1 mouse_genomes_project 6 112314821 112346120 - Gm44290 lincRNA lincRNA MGP_NODShiLtJ_T0079573.1 MGP_NODShiLtJ_G0031041.1 mouse_genomes_project 6 138367063 138388515 + MGP_NODShiLtJ_P0079573 Clec4a1 protein_coding protein_coding MGP_NODShiLtJ_T0080384.1 MGP_NODShiLtJ_G0031252.1 mouse_genomes_project 6 155971318 155993629 + MGP_NODShiLtJ_P0080384 Mgst1 protein_coding protein_coding MGP_NODShiLtJ_T0080385.1 MGP_NODShiLtJ_G0031252.1 mouse_genomes_project 6 155971530 155993479 + MGP_NODShiLtJ_P0080385 Mgst1 protein_coding protein_coding MGP_NODShiLtJ_T0080386.1 MGP_NODShiLtJ_G0031252.1 mouse_genomes_project 6 155971556 155993266 + MGP_NODShiLtJ_P0080386 Mgst1 protein_coding protein_coding MGP_NODShiLtJ_T0080387.1 MGP_NODShiLtJ_G0031252.1 mouse_genomes_project 6 155971573 155993616 + MGP_NODShiLtJ_P0080387 Mgst1 protein_coding protein_coding MGP_NODShiLtJ_T0080388.1 MGP_NODShiLtJ_G0031252.1 mouse_genomes_project 6 155971601 155993258 + MGP_NODShiLtJ_P0080388 Mgst1 protein_coding protein_coding MGP_NODShiLtJ_T0080389.1 MGP_NODShiLtJ_G0031252.1 mouse_genomes_project 6 155972372 155993433 + MGP_NODShiLtJ_P0080389 Mgst1 protein_coding protein_coding MGP_NODShiLtJ_T0080390.1 MGP_NODShiLtJ_G0031252.1 mouse_genomes_project 6 155972588 155993486 + MGP_NODShiLtJ_P0080390 Mgst1 protein_coding protein_coding MGP_NODShiLtJ_T0080391.1 MGP_NODShiLtJ_G0031252.1 mouse_genomes_project 6 155973856 155983168 + MGP_NODShiLtJ_P0080391 Mgst1 protein_coding protein_coding MGP_NODShiLtJ_T0015155.1 MGP_NODShiLtJ_G0013263.1 mouse_genomes_project 6 22852811 22853378 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004862.1 MGP_NODShiLtJ_G0004171.1 mouse_genomes_project 6 32825473 32828356 - Gm13781 antisense antisense MGP_NODShiLtJ_T0004949.1 MGP_NODShiLtJ_G0004234.1 mouse_genomes_project 6 97401715 97404449 - Gm44089 antisense antisense MGP_NODShiLtJ_T0100666.1 MGP_NODShiLtJ_G0039060.1 mouse_genomes_project 6 53856947 53857077 + Gm24348 snoRNA snoRNA MGP_NODShiLtJ_T0079612.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140099859 140119342 - MGP_NODShiLtJ_P0079612 Pex5 protein_coding protein_coding MGP_NODShiLtJ_T0079613.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140099860 140118661 - MGP_NODShiLtJ_P0079613 Pex5 protein_coding protein_coding MGP_NODShiLtJ_T0079614.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140099860 140119342 - MGP_NODShiLtJ_P0079614 Pex5 protein_coding protein_coding MGP_NODShiLtJ_T0079615.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140099860 140119091 - MGP_NODShiLtJ_P0079615 Pex5 protein_coding protein_coding MGP_NODShiLtJ_T0079616.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140099875 140119312 - MGP_NODShiLtJ_P0079616 Pex5 protein_coding protein_coding MGP_NODShiLtJ_T0079617.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140099881 140119388 - MGP_NODShiLtJ_P0079617 Pex5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079618.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140100954 140103244 - Pex5 protein_coding retained_intron MGP_NODShiLtJ_T0079619.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140106759 140118270 - Pex5 protein_coding processed_transcript MGP_NODShiLtJ_T0079620.1 MGP_NODShiLtJ_G0031057.1 mouse_genomes_project 6 140108541 140109596 - Pex5 protein_coding retained_intron MGP_NODShiLtJ_T0100667.1 MGP_NODShiLtJ_G0039061.1 mouse_genomes_project 6 55619570 55619701 - Gm26289 snoRNA snoRNA MGP_NODShiLtJ_T0080133.1 MGP_NODShiLtJ_G0031175.1 mouse_genomes_project 6 146539756 146793052 - MGP_NODShiLtJ_P0080133 protein_coding protein_coding MGP_NODShiLtJ_T0015153.1 MGP_NODShiLtJ_G0013261.1 mouse_genomes_project 6 21264740 21265293 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075964.1 MGP_NODShiLtJ_G0030264.1 mouse_genomes_project 6 10550154 11101242 - MGP_NODShiLtJ_P0075964 Thsd7a protein_coding protein_coding MGP_NODShiLtJ_T0075965.1 MGP_NODShiLtJ_G0030264.1 mouse_genomes_project 6 10555474 11101399 - MGP_NODShiLtJ_P0075965 Thsd7a protein_coding protein_coding MGP_NODShiLtJ_T0075966.1 MGP_NODShiLtJ_G0030264.1 mouse_genomes_project 6 10555514 10557936 - Thsd7a protein_coding retained_intron MGP_NODShiLtJ_T0075967.1 MGP_NODShiLtJ_G0030264.1 mouse_genomes_project 6 10555736 10693450 - Thsd7a protein_coding processed_transcript MGP_NODShiLtJ_T0075968.1 MGP_NODShiLtJ_G0030264.1 mouse_genomes_project 6 10560029 10563921 - Thsd7a protein_coding retained_intron MGP_NODShiLtJ_T0075969.1 MGP_NODShiLtJ_G0030264.1 mouse_genomes_project 6 10762659 10858650 - Thsd7a protein_coding processed_transcript MGP_NODShiLtJ_T0100719.1 MGP_NODShiLtJ_G0039113.1 mouse_genomes_project 6 148107710 148107844 - Gm22362 snoRNA snoRNA MGP_NODShiLtJ_T0080392.1 MGP_NODShiLtJ_G0031253.1 mouse_genomes_project 6 156226704 156489495 - MGP_NODShiLtJ_P0080392 Lmo3 protein_coding protein_coding MGP_NODShiLtJ_T0080393.1 MGP_NODShiLtJ_G0031253.1 mouse_genomes_project 6 156227982 156294912 - MGP_NODShiLtJ_P0080393 Lmo3 protein_coding protein_coding MGP_NODShiLtJ_T0080394.1 MGP_NODShiLtJ_G0031253.1 mouse_genomes_project 6 156228748 156298074 - MGP_NODShiLtJ_P0080394 Lmo3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080395.1 MGP_NODShiLtJ_G0031253.1 mouse_genomes_project 6 156229377 156296440 - MGP_NODShiLtJ_P0080395 Lmo3 protein_coding protein_coding MGP_NODShiLtJ_T0080396.1 MGP_NODShiLtJ_G0031253.1 mouse_genomes_project 6 156229381 156296383 - MGP_NODShiLtJ_P0080396 Lmo3 protein_coding protein_coding MGP_NODShiLtJ_T0080397.1 MGP_NODShiLtJ_G0031253.1 mouse_genomes_project 6 156229688 156300647 - MGP_NODShiLtJ_P0080397 Lmo3 protein_coding protein_coding MGP_NODShiLtJ_T0080398.1 MGP_NODShiLtJ_G0031253.1 mouse_genomes_project 6 156244195 156296465 - MGP_NODShiLtJ_P0080398 Lmo3 protein_coding protein_coding MGP_NODShiLtJ_T0080399.1 MGP_NODShiLtJ_G0031253.1 mouse_genomes_project 6 156288604 156300301 - MGP_NODShiLtJ_P0080399 Lmo3 protein_coding protein_coding MGP_NODShiLtJ_T0015145.1 MGP_NODShiLtJ_G0013253.1 mouse_genomes_project 6 17573250 17574569 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076628.1 MGP_NODShiLtJ_G0030387.1 mouse_genomes_project 6 40978394 41041940 - MGP_NODShiLtJ_P0076628 Svopl protein_coding protein_coding MGP_NODShiLtJ_T0076629.1 MGP_NODShiLtJ_G0030387.1 mouse_genomes_project 6 40979167 41026168 - MGP_NODShiLtJ_P0076629 Svopl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076630.1 MGP_NODShiLtJ_G0030387.1 mouse_genomes_project 6 41009941 41018222 - Svopl protein_coding retained_intron MGP_NODShiLtJ_T0076631.1 MGP_NODShiLtJ_G0030387.1 mouse_genomes_project 6 41010095 41013601 - Svopl protein_coding retained_intron MGP_NODShiLtJ_T0076632.1 MGP_NODShiLtJ_G0030387.1 mouse_genomes_project 6 41010248 41041940 - Svopl protein_coding retained_intron MGP_NODShiLtJ_T0075823.1 MGP_NODShiLtJ_G0030235.1 mouse_genomes_project 6 1435914 1451849 + MGP_NODShiLtJ_P0075823 Col1a2 protein_coding protein_coding MGP_NODShiLtJ_T0075824.1 MGP_NODShiLtJ_G0030235.1 mouse_genomes_project 6 1437542 1478089 + MGP_NODShiLtJ_P0075824 Col1a2 protein_coding protein_coding MGP_NODShiLtJ_T0075825.1 MGP_NODShiLtJ_G0030235.1 mouse_genomes_project 6 1437751 1450441 + Col1a2 protein_coding retained_intron MGP_NODShiLtJ_T0075826.1 MGP_NODShiLtJ_G0030235.1 mouse_genomes_project 6 1437751 1449936 + Col1a2 protein_coding retained_intron MGP_NODShiLtJ_T0075827.1 MGP_NODShiLtJ_G0030235.1 mouse_genomes_project 6 1457172 1466002 + Col1a2 protein_coding retained_intron MGP_NODShiLtJ_T0075828.1 MGP_NODShiLtJ_G0030235.1 mouse_genomes_project 6 1466706 1472430 + Col1a2 protein_coding retained_intron MGP_NODShiLtJ_T0075829.1 MGP_NODShiLtJ_G0030235.1 mouse_genomes_project 6 1472325 1473168 + Col1a2 protein_coding retained_intron MGP_NODShiLtJ_T0075830.1 MGP_NODShiLtJ_G0030235.1 mouse_genomes_project 6 1474033 1474535 + Col1a2 protein_coding retained_intron MGP_NODShiLtJ_T0076819.1 MGP_NODShiLtJ_G0030442.1 mouse_genomes_project 6 45348468 45354758 + MGP_NODShiLtJ_P0076819 Pip protein_coding protein_coding MGP_NODShiLtJ_T0076820.1 MGP_NODShiLtJ_G0030442.1 mouse_genomes_project 6 45348501 45354650 + MGP_NODShiLtJ_P0076820 Pip protein_coding protein_coding MGP_NODShiLtJ_T0076821.1 MGP_NODShiLtJ_G0030442.1 mouse_genomes_project 6 45348518 45354277 + MGP_NODShiLtJ_P0076821 Pip protein_coding protein_coding MGP_NODShiLtJ_T0079878.1 MGP_NODShiLtJ_G0031105.1 mouse_genomes_project 6 141298545 141337686 - MGP_NODShiLtJ_P0079878 Cd9 protein_coding protein_coding MGP_NODShiLtJ_T0079879.1 MGP_NODShiLtJ_G0031105.1 mouse_genomes_project 6 141298868 141318945 - Cd9 protein_coding processed_transcript MGP_NODShiLtJ_T0079880.1 MGP_NODShiLtJ_G0031105.1 mouse_genomes_project 6 141300395 141302504 - Cd9 protein_coding retained_intron MGP_NODShiLtJ_T0001921.1 MGP_NODShiLtJ_G0001833.1 mouse_genomes_project 6 49452709 49463539 + TEC TEC MGP_NODShiLtJ_T0079621.1 MGP_NODShiLtJ_G0031058.1 mouse_genomes_project 6 140135543 140169460 - MGP_NODShiLtJ_P0079621 Clstn3 protein_coding protein_coding MGP_NODShiLtJ_T0079622.1 MGP_NODShiLtJ_G0031058.1 mouse_genomes_project 6 140136096 140138296 - Clstn3 protein_coding processed_transcript MGP_NODShiLtJ_T0079623.1 MGP_NODShiLtJ_G0031058.1 mouse_genomes_project 6 140141564 140143672 - Clstn3 protein_coding retained_intron MGP_NODShiLtJ_T0079624.1 MGP_NODShiLtJ_G0031058.1 mouse_genomes_project 6 140143696 140155251 - Clstn3 protein_coding retained_intron MGP_NODShiLtJ_T0079625.1 MGP_NODShiLtJ_G0031058.1 mouse_genomes_project 6 140161011 140162861 - Clstn3 protein_coding processed_transcript MGP_NODShiLtJ_T0079626.1 MGP_NODShiLtJ_G0031058.1 mouse_genomes_project 6 140166585 140169077 - MGP_NODShiLtJ_P0079626 Clstn3 protein_coding protein_coding MGP_NODShiLtJ_T0099468.1 MGP_NODShiLtJ_G0037862.1 mouse_genomes_project 6 168008804 168008908 - Gm23462 snRNA snRNA MGP_NODShiLtJ_T0076298.1 MGP_NODShiLtJ_G0030333.1 mouse_genomes_project 6 31612145 31614171 + MGP_NODShiLtJ_P0076298 Gm9047 protein_coding protein_coding MGP_NODShiLtJ_T0002105.1 MGP_NODShiLtJ_G0002017.1 mouse_genomes_project 6 145352443 145352640 - TEC TEC MGP_NODShiLtJ_T0015253.1 MGP_NODShiLtJ_G0013361.1 mouse_genomes_project 6 66967143 66967325 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078948.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127872194 127882437 + MGP_NODShiLtJ_P0078948 Ttll3 protein_coding protein_coding MGP_NODShiLtJ_T0078949.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127873672 127881837 + Ttll3 protein_coding processed_transcript MGP_NODShiLtJ_T0078950.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127875428 127898697 + MGP_NODShiLtJ_P0078950 Ttll3 protein_coding protein_coding MGP_NODShiLtJ_T0078951.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127875467 127898678 + MGP_NODShiLtJ_P0078951 Ttll3 protein_coding protein_coding MGP_NODShiLtJ_T0078952.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127876130 127898693 + MGP_NODShiLtJ_P0078952 Ttll3 protein_coding protein_coding MGP_NODShiLtJ_T0078953.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127876147 127892900 + MGP_NODShiLtJ_P0078953 Ttll3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078954.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127880724 127898671 + Ttll3 protein_coding retained_intron MGP_NODShiLtJ_T0078955.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127892206 127892900 + Ttll3 protein_coding processed_transcript MGP_NODShiLtJ_T0078956.1 MGP_NODShiLtJ_G0030928.1 mouse_genomes_project 6 127896939 127898667 + Ttll3 protein_coding processed_transcript MGP_NODShiLtJ_T0076903.1 MGP_NODShiLtJ_G0030473.1 mouse_genomes_project 6 46525830 46526757 + MGP_NODShiLtJ_P0076903 Olfr446 protein_coding protein_coding MGP_NODShiLtJ_T0099416.1 MGP_NODShiLtJ_G0037810.1 mouse_genomes_project 6 21500594 21500697 + Gm26373 snRNA snRNA MGP_NODShiLtJ_T0000178.1 MGP_NODShiLtJ_G0000129.1 mouse_genomes_project 6 77042245 77076365 - MGP_NODShiLtJ_P0000178 Igkv10-96 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0078879.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127532939 127565730 + Setd5 protein_coding retained_intron MGP_NODShiLtJ_T0078880.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127532939 127613037 + MGP_NODShiLtJ_P0078880 Setd5 protein_coding protein_coding MGP_NODShiLtJ_T0078881.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127533167 127564488 + Setd5 protein_coding processed_transcript MGP_NODShiLtJ_T0078882.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127533208 127576426 + Setd5 protein_coding processed_transcript MGP_NODShiLtJ_T0078883.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127533245 127613026 + MGP_NODShiLtJ_P0078883 Setd5 protein_coding protein_coding MGP_NODShiLtJ_T0078884.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127563103 127597940 + Setd5 protein_coding processed_transcript MGP_NODShiLtJ_T0078885.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127563205 127613037 + MGP_NODShiLtJ_P0078885 Setd5 protein_coding protein_coding MGP_NODShiLtJ_T0078886.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127567646 127576740 + Setd5 protein_coding retained_intron MGP_NODShiLtJ_T0078887.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127568298 127611074 + MGP_NODShiLtJ_P0078887 Setd5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078888.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127568638 127611439 + Setd5 protein_coding retained_intron MGP_NODShiLtJ_T0078889.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127569190 127572464 + Setd5 protein_coding retained_intron MGP_NODShiLtJ_T0078890.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127569190 127576395 + Setd5 protein_coding retained_intron MGP_NODShiLtJ_T0078891.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127584161 127589192 + Setd5 protein_coding retained_intron MGP_NODShiLtJ_T0078892.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127586560 127611458 + Setd5 protein_coding retained_intron MGP_NODShiLtJ_T0078893.1 MGP_NODShiLtJ_G0030919.1 mouse_genomes_project 6 127587491 127598176 + Setd5 protein_coding processed_transcript MGP_NODShiLtJ_T0100670.1 MGP_NODShiLtJ_G0039064.1 mouse_genomes_project 6 60391502 60391631 + Gm24230 snoRNA snoRNA MGP_NODShiLtJ_T0079267.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132758399 132763596 - MGP_NODShiLtJ_P0079267 Fxyd4 protein_coding protein_coding MGP_NODShiLtJ_T0079268.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132758400 132763239 - MGP_NODShiLtJ_P0079268 Fxyd4 protein_coding protein_coding MGP_NODShiLtJ_T0079269.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132758400 132763239 - MGP_NODShiLtJ_P0079269 Fxyd4 protein_coding protein_coding MGP_NODShiLtJ_T0079270.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132758400 132763239 - MGP_NODShiLtJ_P0079270 Fxyd4 protein_coding protein_coding MGP_NODShiLtJ_T0079271.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132758400 132763239 - MGP_NODShiLtJ_P0079271 Fxyd4 protein_coding protein_coding MGP_NODShiLtJ_T0079272.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132758569 132763239 - MGP_NODShiLtJ_P0079272 Fxyd4 protein_coding protein_coding MGP_NODShiLtJ_T0079273.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132759676 132763239 - Fxyd4 protein_coding retained_intron MGP_NODShiLtJ_T0079274.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132759686 132761857 - Fxyd4 protein_coding retained_intron MGP_NODShiLtJ_T0079275.1 MGP_NODShiLtJ_G0030986.1 mouse_genomes_project 6 132759688 132763239 - Fxyd4 protein_coding retained_intron MGP_NODShiLtJ_T0015331.1 MGP_NODShiLtJ_G0013439.1 mouse_genomes_project 6 92758299 92758990 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002129.1 MGP_NODShiLtJ_G0002041.1 mouse_genomes_project 6 162582260 162584388 - TEC TEC MGP_NODShiLtJ_T0001865.1 MGP_NODShiLtJ_G0001777.1 mouse_genomes_project 6 18497 21564 - TEC TEC MGP_NODShiLtJ_T0080171.1 MGP_NODShiLtJ_G0031197.1 mouse_genomes_project 6 149803064 149804108 + MGP_NODShiLtJ_P0080171 Tas2r102 protein_coding protein_coding MGP_NODShiLtJ_T0076419.1 MGP_NODShiLtJ_G0030349.1 mouse_genomes_project 6 32865135 32885842 + MGP_NODShiLtJ_P0076419 Cpa5 protein_coding protein_coding MGP_NODShiLtJ_T0076420.1 MGP_NODShiLtJ_G0030349.1 mouse_genomes_project 6 32865176 32885617 + MGP_NODShiLtJ_P0076420 Cpa5 protein_coding protein_coding MGP_NODShiLtJ_T0076421.1 MGP_NODShiLtJ_G0030349.1 mouse_genomes_project 6 32866313 32885840 + MGP_NODShiLtJ_P0076421 Cpa5 protein_coding protein_coding MGP_NODShiLtJ_T0076422.1 MGP_NODShiLtJ_G0030349.1 mouse_genomes_project 6 32866680 32885533 + MGP_NODShiLtJ_P0076422 Cpa5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080306.1 MGP_NODShiLtJ_G0031238.1 mouse_genomes_project 6 154435806 154452885 - MGP_NODShiLtJ_P0080306 Wbp11 protein_coding protein_coding MGP_NODShiLtJ_T0080307.1 MGP_NODShiLtJ_G0031238.1 mouse_genomes_project 6 154439051 154444896 - MGP_NODShiLtJ_P0080307 Wbp11 protein_coding protein_coding MGP_NODShiLtJ_T0080308.1 MGP_NODShiLtJ_G0031238.1 mouse_genomes_project 6 154439276 154452788 - MGP_NODShiLtJ_P0080308 Wbp11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080309.1 MGP_NODShiLtJ_G0031238.1 mouse_genomes_project 6 154443418 154452795 - Wbp11 protein_coding retained_intron MGP_NODShiLtJ_T0080310.1 MGP_NODShiLtJ_G0031238.1 mouse_genomes_project 6 154449200 154452787 - Wbp11 protein_coding retained_intron MGP_NODShiLtJ_T0080311.1 MGP_NODShiLtJ_G0031238.1 mouse_genomes_project 6 154449950 154450938 - Wbp11 protein_coding retained_intron MGP_NODShiLtJ_T0080312.1 MGP_NODShiLtJ_G0031238.1 mouse_genomes_project 6 154450358 154452388 - MGP_NODShiLtJ_P0080312 Wbp11 protein_coding protein_coding MGP_NODShiLtJ_T0078758.1 MGP_NODShiLtJ_G0030893.1 mouse_genomes_project 6 112992695 113099915 - MGP_NODShiLtJ_P0078758 Shq1 protein_coding protein_coding MGP_NODShiLtJ_T0078759.1 MGP_NODShiLtJ_G0030893.1 mouse_genomes_project 6 112997529 113099915 - MGP_NODShiLtJ_P0078759 Shq1 protein_coding protein_coding MGP_NODShiLtJ_T0078760.1 MGP_NODShiLtJ_G0030893.1 mouse_genomes_project 6 112997530 113099897 - MGP_NODShiLtJ_P0078760 Shq1 protein_coding protein_coding MGP_NODShiLtJ_T0078761.1 MGP_NODShiLtJ_G0030893.1 mouse_genomes_project 6 113091599 113099891 - Shq1 protein_coding processed_transcript MGP_NODShiLtJ_T0005051.1 MGP_NODShiLtJ_G0004307.1 mouse_genomes_project 6 153397745 153407238 + Gm14330 antisense antisense MGP_NODShiLtJ_T0015527.1 MGP_NODShiLtJ_G0013635.1 mouse_genomes_project 6 159303148 159303264 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008474.1 MGP_NODShiLtJ_G0006849.1 mouse_genomes_project 6 33981244 33992209 + lincRNA lincRNA MGP_NODShiLtJ_T0077239.1 MGP_NODShiLtJ_G0030557.1 mouse_genomes_project 6 57978954 58038066 + MGP_NODShiLtJ_P0077239 Tax1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0077240.1 MGP_NODShiLtJ_G0030557.1 mouse_genomes_project 6 57978975 58001184 + MGP_NODShiLtJ_P0077240 Tax1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0077241.1 MGP_NODShiLtJ_G0030557.1 mouse_genomes_project 6 57978988 57998774 + Tax1bp1 protein_coding retained_intron MGP_NODShiLtJ_T0077242.1 MGP_NODShiLtJ_G0030557.1 mouse_genomes_project 6 57979444 58001218 + MGP_NODShiLtJ_P0077242 Tax1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0077243.1 MGP_NODShiLtJ_G0030557.1 mouse_genomes_project 6 57979575 57994530 + MGP_NODShiLtJ_P0077243 Tax1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0077244.1 MGP_NODShiLtJ_G0030557.1 mouse_genomes_project 6 58010569 58012497 + Tax1bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0077245.1 MGP_NODShiLtJ_G0030557.1 mouse_genomes_project 6 58028751 58033484 + Tax1bp1 protein_coding retained_intron MGP_NODShiLtJ_T0076831.1 MGP_NODShiLtJ_G0030448.1 mouse_genomes_project 6 45723372 45724332 + MGP_NODShiLtJ_P0076831 Tas2r144 protein_coding protein_coding MGP_NODShiLtJ_T0000183.1 MGP_NODShiLtJ_G0000133.1 mouse_genomes_project 6 77303722 77304192 - MGP_NODShiLtJ_P0000183 Igkv12-89 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000184.1 MGP_NODShiLtJ_G0000133.1 mouse_genomes_project 6 77303722 77304192 - MGP_NODShiLtJ_P0000184 Igkv12-89 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0002144.1 MGP_NODShiLtJ_G0002056.1 mouse_genomes_project 6 167986029 167988699 - TEC TEC MGP_NODShiLtJ_T0080316.1 MGP_NODShiLtJ_G0031240.1 mouse_genomes_project 6 154480736 154492015 - MGP_NODShiLtJ_P0080316 protein_coding protein_coding MGP_NODShiLtJ_T0101371.1 MGP_NODShiLtJ_G0039591.1 mouse_genomes_project 6 145298932 145314176 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101372.1 MGP_NODShiLtJ_G0039591.1 mouse_genomes_project 6 145299020 145314097 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0077543.1 MGP_NODShiLtJ_G0030646.1 mouse_genomes_project 6 74699603 74700508 - MGP_NODShiLtJ_P0077543 protein_coding protein_coding MGP_NODShiLtJ_T0015502.1 MGP_NODShiLtJ_G0013610.1 mouse_genomes_project 6 149800316 149800587 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098433.1 MGP_NODShiLtJ_G0036834.1 mouse_genomes_project 6 102379388 102379703 - sense_intronic sense_intronic MGP_NODShiLtJ_T0010664.1 MGP_NODShiLtJ_G0008797.1 mouse_genomes_project 6 56778052 56778129 + Gm22914 miRNA miRNA MGP_NODShiLtJ_T0075988.1 MGP_NODShiLtJ_G0030269.1 mouse_genomes_project 6 12415323 12420798 - MGP_NODShiLtJ_P0075988 Gpr85 protein_coding protein_coding MGP_NODShiLtJ_T0075989.1 MGP_NODShiLtJ_G0030269.1 mouse_genomes_project 6 12415933 12419294 - MGP_NODShiLtJ_P0075989 Gpr85 protein_coding protein_coding MGP_NODShiLtJ_T0075990.1 MGP_NODShiLtJ_G0030269.1 mouse_genomes_project 6 12415942 12418107 - MGP_NODShiLtJ_P0075990 Gpr85 protein_coding protein_coding MGP_NODShiLtJ_T0075991.1 MGP_NODShiLtJ_G0030269.1 mouse_genomes_project 6 12418939 12420351 - Gpr85 protein_coding processed_transcript MGP_NODShiLtJ_T0002637.1 MGP_NODShiLtJ_G0002519.1 mouse_genomes_project 6 44526160 44526655 + MGP_NODShiLtJ_P0002637 Trbv17 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0079246.1 MGP_NODShiLtJ_G0030983.1 mouse_genomes_project 6 131912178 131918710 + MGP_NODShiLtJ_P0079246 Cxcl12 protein_coding protein_coding MGP_NODShiLtJ_T0079247.1 MGP_NODShiLtJ_G0030983.1 mouse_genomes_project 6 131912217 131925007 + MGP_NODShiLtJ_P0079247 Cxcl12 protein_coding protein_coding MGP_NODShiLtJ_T0079248.1 MGP_NODShiLtJ_G0030983.1 mouse_genomes_project 6 131912220 131919768 + Cxcl12 protein_coding retained_intron MGP_NODShiLtJ_T0079249.1 MGP_NODShiLtJ_G0030983.1 mouse_genomes_project 6 131912220 131925008 + MGP_NODShiLtJ_P0079249 Cxcl12 protein_coding protein_coding MGP_NODShiLtJ_T0015400.1 MGP_NODShiLtJ_G0013508.1 mouse_genomes_project 6 120780354 120780808 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079084.1 MGP_NODShiLtJ_G0030951.1 mouse_genomes_project 6 129544553 129578025 - MGP_NODShiLtJ_P0079084 Tamm41 protein_coding protein_coding MGP_NODShiLtJ_T0079085.1 MGP_NODShiLtJ_G0030951.1 mouse_genomes_project 6 129544560 129552675 - Tamm41 protein_coding retained_intron MGP_NODShiLtJ_T0079086.1 MGP_NODShiLtJ_G0030951.1 mouse_genomes_project 6 129548330 129556513 - Tamm41 protein_coding retained_intron MGP_NODShiLtJ_T0079087.1 MGP_NODShiLtJ_G0030951.1 mouse_genomes_project 6 129550982 129572415 - MGP_NODShiLtJ_P0079087 Tamm41 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079088.1 MGP_NODShiLtJ_G0030951.1 mouse_genomes_project 6 129552354 129578004 - MGP_NODShiLtJ_P0079088 Tamm41 protein_coding protein_coding MGP_NODShiLtJ_T0079089.1 MGP_NODShiLtJ_G0030951.1 mouse_genomes_project 6 129556340 129577974 - MGP_NODShiLtJ_P0079089 Tamm41 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079090.1 MGP_NODShiLtJ_G0030951.1 mouse_genomes_project 6 129564871 129578025 - Tamm41 protein_coding retained_intron MGP_NODShiLtJ_T0079091.1 MGP_NODShiLtJ_G0030951.1 mouse_genomes_project 6 129571428 129572416 - Tamm41 protein_coding processed_transcript MGP_NODShiLtJ_T0076473.1 MGP_NODShiLtJ_G0030358.1 mouse_genomes_project 6 34398139 34407477 + 1700012A03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0076474.1 MGP_NODShiLtJ_G0030358.1 mouse_genomes_project 6 34398161 34407477 + 1700012A03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0076475.1 MGP_NODShiLtJ_G0030358.1 mouse_genomes_project 6 34398178 34407471 + MGP_NODShiLtJ_P0076475 1700012A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0076476.1 MGP_NODShiLtJ_G0030358.1 mouse_genomes_project 6 34406696 34407177 + 1700012A03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0099413.1 MGP_NODShiLtJ_G0037807.1 mouse_genomes_project 6 16822904 16823011 + Gm25021 snRNA snRNA MGP_NODShiLtJ_T0015355.1 MGP_NODShiLtJ_G0013463.1 mouse_genomes_project 6 97609940 97613918 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099434.1 MGP_NODShiLtJ_G0037828.1 mouse_genomes_project 6 75130037 75130171 + Gm25260 snRNA snRNA MGP_NODShiLtJ_T0078807.1 MGP_NODShiLtJ_G0030903.1 mouse_genomes_project 6 120449726 120471185 - MGP_NODShiLtJ_P0078807 Crbn protein_coding protein_coding MGP_NODShiLtJ_T0078808.1 MGP_NODShiLtJ_G0030903.1 mouse_genomes_project 6 120449726 120471176 - MGP_NODShiLtJ_P0078808 Crbn protein_coding protein_coding MGP_NODShiLtJ_T0078809.1 MGP_NODShiLtJ_G0030903.1 mouse_genomes_project 6 120452971 120470143 - MGP_NODShiLtJ_P0078809 Crbn protein_coding protein_coding MGP_NODShiLtJ_T0078810.1 MGP_NODShiLtJ_G0030903.1 mouse_genomes_project 6 120459692 120471172 - Crbn protein_coding retained_intron MGP_NODShiLtJ_T0078811.1 MGP_NODShiLtJ_G0030903.1 mouse_genomes_project 6 120468284 120471188 - Crbn protein_coding retained_intron MGP_NODShiLtJ_T0018095.1 MGP_NODShiLtJ_G0015492.1 mouse_genomes_project 6 42708968 42725284 + 8030453O22Rik processed_transcript antisense MGP_NODShiLtJ_T0018096.1 MGP_NODShiLtJ_G0015492.1 mouse_genomes_project 6 42708977 42728429 + 8030453O22Rik processed_transcript antisense MGP_NODShiLtJ_T0018097.1 MGP_NODShiLtJ_G0015492.1 mouse_genomes_project 6 42708981 42709730 + 8030453O22Rik processed_transcript retained_intron MGP_NODShiLtJ_T0078715.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111196905 111562422 - MGP_NODShiLtJ_P0078715 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078716.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111196909 111738874 - MGP_NODShiLtJ_P0078716 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078717.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111196982 111201353 - Foxp1 protein_coding processed_transcript MGP_NODShiLtJ_T0078718.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111200756 111827509 - MGP_NODShiLtJ_P0078718 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078719.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111455239 - MGP_NODShiLtJ_P0078719 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078720.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111455239 - MGP_NODShiLtJ_P0078720 Foxp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078721.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111455239 - MGP_NODShiLtJ_P0078721 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078722.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111738874 - MGP_NODShiLtJ_P0078722 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078723.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111455239 - MGP_NODShiLtJ_P0078723 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078724.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111455239 - MGP_NODShiLtJ_P0078724 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078725.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111738874 - MGP_NODShiLtJ_P0078725 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078726.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111467525 - MGP_NODShiLtJ_P0078726 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078727.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111301242 - MGP_NODShiLtJ_P0078727 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078728.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201657 111455239 - MGP_NODShiLtJ_P0078728 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078729.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111201738 111207113 - Foxp1 protein_coding retained_intron MGP_NODShiLtJ_T0078730.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111217100 111301296 - MGP_NODShiLtJ_P0078730 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078731.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111223767 111275404 - Foxp1 protein_coding retained_intron MGP_NODShiLtJ_T0078732.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111274923 111301925 - MGP_NODShiLtJ_P0078732 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078733.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111275116 111324075 - MGP_NODShiLtJ_P0078733 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078734.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111278408 111301249 - Foxp1 protein_coding processed_transcript MGP_NODShiLtJ_T0078735.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111281656 111382452 - MGP_NODShiLtJ_P0078735 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078736.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111281667 111324058 - MGP_NODShiLtJ_P0078736 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078737.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111289193 111300974 - MGP_NODShiLtJ_P0078737 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078738.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111361298 111544249 - MGP_NODShiLtJ_P0078738 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078739.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111442231 111562422 - Foxp1 protein_coding processed_transcript MGP_NODShiLtJ_T0078740.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111454160 111562439 - Foxp1 protein_coding retained_intron MGP_NODShiLtJ_T0078741.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111454160 111562439 - Foxp1 protein_coding retained_intron MGP_NODShiLtJ_T0078742.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111455149 111827674 - MGP_NODShiLtJ_P0078742 Foxp1 protein_coding protein_coding MGP_NODShiLtJ_T0078744.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111556263 111828926 - Foxp1 protein_coding processed_transcript MGP_NODShiLtJ_T0078745.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111604331 111739724 - Foxp1 protein_coding processed_transcript MGP_NODShiLtJ_T0078748.1 MGP_NODShiLtJ_G0030887.1 mouse_genomes_project 6 111738764 111829000 - Foxp1 protein_coding processed_transcript MGP_NODShiLtJ_T0076602.1 MGP_NODShiLtJ_G0030380.1 mouse_genomes_project 6 38115606 38161840 - MGP_NODShiLtJ_P0076602 Mtpn protein_coding protein_coding MGP_NODShiLtJ_T0076603.1 MGP_NODShiLtJ_G0030380.1 mouse_genomes_project 6 38141673 38161751 - MGP_NODShiLtJ_P0076603 Mtpn protein_coding protein_coding MGP_NODShiLtJ_T0078138.1 MGP_NODShiLtJ_G0030771.1 mouse_genomes_project 6 97199011 97206382 - MGP_NODShiLtJ_P0078138 protein_coding protein_coding MGP_NODShiLtJ_T0078139.1 MGP_NODShiLtJ_G0030771.1 mouse_genomes_project 6 97199019 97206361 - protein_coding processed_transcript MGP_NODShiLtJ_T0078140.1 MGP_NODShiLtJ_G0030771.1 mouse_genomes_project 6 97200151 97206299 - MGP_NODShiLtJ_P0078140 protein_coding protein_coding MGP_NODShiLtJ_T0015282.1 MGP_NODShiLtJ_G0013390.1 mouse_genomes_project 6 74267369 74270832 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076162.1 MGP_NODShiLtJ_G0030298.1 mouse_genomes_project 6 24491785 24493024 - MGP_NODShiLtJ_P0076162 Rnf148 protein_coding protein_coding MGP_NODShiLtJ_T0076263.1 MGP_NODShiLtJ_G0030327.1 mouse_genomes_project 6 31451222 31459855 + Fam71f1 protein_coding processed_transcript MGP_NODShiLtJ_T0076264.1 MGP_NODShiLtJ_G0030327.1 mouse_genomes_project 6 31451222 31469142 + MGP_NODShiLtJ_P0076264 Fam71f1 protein_coding protein_coding MGP_NODShiLtJ_T0076265.1 MGP_NODShiLtJ_G0030327.1 mouse_genomes_project 6 31451239 31468977 + MGP_NODShiLtJ_P0076265 Fam71f1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076266.1 MGP_NODShiLtJ_G0030327.1 mouse_genomes_project 6 31451239 31468977 + MGP_NODShiLtJ_P0076266 Fam71f1 protein_coding protein_coding MGP_NODShiLtJ_T0076267.1 MGP_NODShiLtJ_G0030327.1 mouse_genomes_project 6 31451281 31468977 + MGP_NODShiLtJ_P0076267 Fam71f1 protein_coding protein_coding MGP_NODShiLtJ_T0101989.1 MGP_NODShiLtJ_G0040157.1 mouse_genomes_project 6 46533484 46533798 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002000.1 MGP_NODShiLtJ_G0001912.1 mouse_genomes_project 6 94954960 94957179 + TEC TEC MGP_NODShiLtJ_T0079603.1 MGP_NODShiLtJ_G0031051.1 mouse_genomes_project 6 139302353 139366546 + MGP_NODShiLtJ_P0079603 Vmn2r24 protein_coding protein_coding MGP_NODShiLtJ_T0001952.1 MGP_NODShiLtJ_G0001864.1 mouse_genomes_project 6 63383922 63386764 - TEC TEC MGP_NODShiLtJ_T0015381.1 MGP_NODShiLtJ_G0013489.1 mouse_genomes_project 6 111030569 111030849 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077773.1 MGP_NODShiLtJ_G0030694.1 mouse_genomes_project 6 81995563 82197484 - MGP_NODShiLtJ_P0077773 Dnah6 protein_coding protein_coding MGP_NODShiLtJ_T0077774.1 MGP_NODShiLtJ_G0030694.1 mouse_genomes_project 6 81995566 82197504 - MGP_NODShiLtJ_P0077774 Dnah6 protein_coding protein_coding MGP_NODShiLtJ_T0077775.1 MGP_NODShiLtJ_G0030694.1 mouse_genomes_project 6 81995699 82195665 - MGP_NODShiLtJ_P0077775 Dnah6 protein_coding protein_coding MGP_NODShiLtJ_T0077776.1 MGP_NODShiLtJ_G0030694.1 mouse_genomes_project 6 82071007 82118292 - Dnah6 protein_coding retained_intron MGP_NODShiLtJ_T0015359.1 MGP_NODShiLtJ_G0013467.1 mouse_genomes_project 6 101797363 101797945 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076812.1 MGP_NODShiLtJ_G0030440.1 mouse_genomes_project 6 45155948 45174304 - MGP_NODShiLtJ_P0076812 Kel protein_coding protein_coding MGP_NODShiLtJ_T0076813.1 MGP_NODShiLtJ_G0030440.1 mouse_genomes_project 6 45155953 45157615 - MGP_NODShiLtJ_P0076813 Kel protein_coding protein_coding MGP_NODShiLtJ_T0076814.1 MGP_NODShiLtJ_G0030440.1 mouse_genomes_project 6 45155972 45157474 - Kel protein_coding processed_transcript MGP_NODShiLtJ_T0076815.1 MGP_NODShiLtJ_G0030440.1 mouse_genomes_project 6 45157641 45169133 - MGP_NODShiLtJ_P0076815 Kel protein_coding protein_coding MGP_NODShiLtJ_T0076816.1 MGP_NODShiLtJ_G0030440.1 mouse_genomes_project 6 45158056 45158582 - Kel protein_coding retained_intron MGP_NODShiLtJ_T0015281.1 MGP_NODShiLtJ_G0013389.1 mouse_genomes_project 6 73971009 73971703 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010688.1 MGP_NODShiLtJ_G0008821.1 mouse_genomes_project 6 122276805 122276866 + Mir7661 miRNA miRNA MGP_NODShiLtJ_T0001922.1 MGP_NODShiLtJ_G0001834.1 mouse_genomes_project 6 49530436 49531841 + TEC TEC MGP_NODShiLtJ_T0080177.1 MGP_NODShiLtJ_G0031203.1 mouse_genomes_project 6 149990223 149991225 + MGP_NODShiLtJ_P0080177 Tas2r110 protein_coding protein_coding MGP_NODShiLtJ_T0004951.1 MGP_NODShiLtJ_G0004236.1 mouse_genomes_project 6 97811051 97822364 - A430078I02Rik antisense antisense MGP_NODShiLtJ_T0004952.1 MGP_NODShiLtJ_G0004236.1 mouse_genomes_project 6 97812404 97822424 - A430078I02Rik antisense antisense MGP_NODShiLtJ_T0005033.1 MGP_NODShiLtJ_G0004292.1 mouse_genomes_project 6 143145394 143216009 + 9330179D12Rik antisense antisense MGP_NODShiLtJ_T0005034.1 MGP_NODShiLtJ_G0004292.1 mouse_genomes_project 6 143145631 143216301 + 9330179D12Rik antisense antisense MGP_NODShiLtJ_T0000155.1 MGP_NODShiLtJ_G0000114.1 mouse_genomes_project 6 76067420 76067886 + MGP_NODShiLtJ_P0000155 Igkv14-130 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000156.1 MGP_NODShiLtJ_G0000114.1 mouse_genomes_project 6 76067420 76067886 + MGP_NODShiLtJ_P0000156 Igkv14-130 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0001964.1 MGP_NODShiLtJ_G0001876.1 mouse_genomes_project 6 80648535 80649798 + TEC TEC MGP_NODShiLtJ_T0005571.1 MGP_NODShiLtJ_G0004687.1 mouse_genomes_project 6 130277234 130279047 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0005572.1 MGP_NODShiLtJ_G0004687.1 mouse_genomes_project 6 130277261 130278403 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0001949.1 MGP_NODShiLtJ_G0001861.1 mouse_genomes_project 6 62338646 62340301 + TEC TEC MGP_NODShiLtJ_T0015425.1 MGP_NODShiLtJ_G0013533.1 mouse_genomes_project 6 129285707 129286140 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077607.1 MGP_NODShiLtJ_G0030664.1 mouse_genomes_project 6 80104417 80119046 + MGP_NODShiLtJ_P0077607 Cd8b1 protein_coding protein_coding MGP_NODShiLtJ_T0077331.1 MGP_NODShiLtJ_G0030574.1 mouse_genomes_project 6 60592482 60596912 - MGP_NODShiLtJ_P0077331 Inmt protein_coding protein_coding MGP_NODShiLtJ_T0077332.1 MGP_NODShiLtJ_G0030574.1 mouse_genomes_project 6 60594632 60596883 - Inmt protein_coding retained_intron MGP_NODShiLtJ_T0005046.1 MGP_NODShiLtJ_G0004302.1 mouse_genomes_project 6 151706087 151802798 - Gm44293 antisense antisense MGP_NODShiLtJ_T0101363.1 MGP_NODShiLtJ_G0039587.1 mouse_genomes_project 6 96361714 96365603 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101364.1 MGP_NODShiLtJ_G0039587.1 mouse_genomes_project 6 96365095 96366059 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101365.1 MGP_NODShiLtJ_G0039587.1 mouse_genomes_project 6 96365298 96366314 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0078519.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102232961 102296074 - MGP_NODShiLtJ_P0078519 Iqsec1 protein_coding protein_coding MGP_NODShiLtJ_T0078520.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102236427 102240751 - Iqsec1 protein_coding retained_intron MGP_NODShiLtJ_T0078521.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102236427 102397547 - MGP_NODShiLtJ_P0078521 Iqsec1 protein_coding protein_coding MGP_NODShiLtJ_T0078522.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102241090 102247106 - Iqsec1 protein_coding processed_transcript MGP_NODShiLtJ_T0078523.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102241274 102246454 - Iqsec1 protein_coding processed_transcript MGP_NODShiLtJ_T0078524.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102268204 102273092 - Iqsec1 protein_coding processed_transcript MGP_NODShiLtJ_T0078525.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102268918 102348495 - MGP_NODShiLtJ_P0078525 Iqsec1 protein_coding protein_coding MGP_NODShiLtJ_T0078526.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102269048 102321070 - Iqsec1 protein_coding processed_transcript MGP_NODShiLtJ_T0078527.1 MGP_NODShiLtJ_G0030848.1 mouse_genomes_project 6 102272994 102341927 - Iqsec1 protein_coding processed_transcript MGP_NODShiLtJ_T0015474.1 MGP_NODShiLtJ_G0013582.1 mouse_genomes_project 6 143295651 143296098 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015530.1 MGP_NODShiLtJ_G0013638.1 mouse_genomes_project 6 160565693 160566758 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015471.1 MGP_NODShiLtJ_G0013579.1 mouse_genomes_project 6 143169855 143170375 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076454.1 MGP_NODShiLtJ_G0030354.1 mouse_genomes_project 6 33183972 33191792 - Tsga13 protein_coding processed_transcript MGP_NODShiLtJ_T0076455.1 MGP_NODShiLtJ_G0030354.1 mouse_genomes_project 6 33183972 33204707 - MGP_NODShiLtJ_P0076455 Tsga13 protein_coding protein_coding MGP_NODShiLtJ_T0076456.1 MGP_NODShiLtJ_G0030354.1 mouse_genomes_project 6 33184206 33188825 - Tsga13 protein_coding retained_intron MGP_NODShiLtJ_T0077710.1 MGP_NODShiLtJ_G0030682.1 mouse_genomes_project 6 81270793 81274118 - MGP_NODShiLtJ_P0077710 Vamp5 protein_coding protein_coding MGP_NODShiLtJ_T0077711.1 MGP_NODShiLtJ_G0030682.1 mouse_genomes_project 6 81271023 81283421 - MGP_NODShiLtJ_P0077711 Vamp5 protein_coding protein_coding MGP_NODShiLtJ_T0077712.1 MGP_NODShiLtJ_G0030682.1 mouse_genomes_project 6 81271029 81283466 - MGP_NODShiLtJ_P0077712 Vamp5 protein_coding protein_coding MGP_NODShiLtJ_T0011521.1 MGP_NODShiLtJ_G0009654.1 mouse_genomes_project 6 17329092 17329212 + Gm27402 misc_RNA misc_RNA MGP_NODShiLtJ_T0001889.1 MGP_NODShiLtJ_G0001801.1 mouse_genomes_project 6 21693539 21702617 + TEC TEC MGP_NODShiLtJ_T0001902.1 MGP_NODShiLtJ_G0001814.1 mouse_genomes_project 6 33402385 33404478 - TEC TEC MGP_NODShiLtJ_T0076043.1 MGP_NODShiLtJ_G0030278.1 mouse_genomes_project 6 16848366 16963869 + MGP_NODShiLtJ_P0076043 Met protein_coding protein_coding MGP_NODShiLtJ_T0076044.1 MGP_NODShiLtJ_G0030278.1 mouse_genomes_project 6 16848393 16877203 + MGP_NODShiLtJ_P0076044 Met protein_coding protein_coding MGP_NODShiLtJ_T0076045.1 MGP_NODShiLtJ_G0030278.1 mouse_genomes_project 6 16848604 16962118 + MGP_NODShiLtJ_P0076045 Met protein_coding protein_coding MGP_NODShiLtJ_T0076046.1 MGP_NODShiLtJ_G0030278.1 mouse_genomes_project 6 16848673 16929391 + Met protein_coding retained_intron MGP_NODShiLtJ_T0076047.1 MGP_NODShiLtJ_G0030278.1 mouse_genomes_project 6 16876696 16961712 + MGP_NODShiLtJ_P0076047 Met protein_coding protein_coding MGP_NODShiLtJ_T0076048.1 MGP_NODShiLtJ_G0030278.1 mouse_genomes_project 6 16921729 16935189 + MGP_NODShiLtJ_P0076048 Met protein_coding protein_coding MGP_NODShiLtJ_T0076049.1 MGP_NODShiLtJ_G0030278.1 mouse_genomes_project 6 16934951 16942113 + MGP_NODShiLtJ_P0076049 Met protein_coding protein_coding MGP_NODShiLtJ_T0008481.1 MGP_NODShiLtJ_G0006855.1 mouse_genomes_project 6 36483909 36493323 - Gm13853 lincRNA lincRNA MGP_NODShiLtJ_T0000188.1 MGP_NODShiLtJ_G0000137.1 mouse_genomes_project 6 77382761 77383289 - MGP_NODShiLtJ_P0000188 Igkv4-90 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0076885.1 MGP_NODShiLtJ_G0030465.1 mouse_genomes_project 6 46207445 46256132 - MGP_NODShiLtJ_P0076885 Tcaf1 protein_coding protein_coding MGP_NODShiLtJ_T0076886.1 MGP_NODShiLtJ_G0030465.1 mouse_genomes_project 6 46209385 46235600 - MGP_NODShiLtJ_P0076886 Tcaf1 protein_coding protein_coding MGP_NODShiLtJ_T0076887.1 MGP_NODShiLtJ_G0030465.1 mouse_genomes_project 6 46210472 46235572 - MGP_NODShiLtJ_P0076887 Tcaf1 protein_coding protein_coding MGP_NODShiLtJ_T0076888.1 MGP_NODShiLtJ_G0030465.1 mouse_genomes_project 6 46216911 46235516 - Tcaf1 protein_coding retained_intron MGP_NODShiLtJ_T0076889.1 MGP_NODShiLtJ_G0030465.1 mouse_genomes_project 6 46219241 46256115 - Tcaf1 protein_coding processed_transcript MGP_NODShiLtJ_T0076890.1 MGP_NODShiLtJ_G0030465.1 mouse_genomes_project 6 46227751 46256115 - Tcaf1 protein_coding retained_intron MGP_NODShiLtJ_T0076891.1 MGP_NODShiLtJ_G0030465.1 mouse_genomes_project 6 46232811 46235521 - Tcaf1 protein_coding processed_transcript MGP_NODShiLtJ_T0076892.1 MGP_NODShiLtJ_G0030465.1 mouse_genomes_project 6 46255140 46256116 - Tcaf1 protein_coding processed_transcript MGP_NODShiLtJ_T0098436.1 MGP_NODShiLtJ_G0036837.1 mouse_genomes_project 6 128297585 128299464 - Gm44167 sense_intronic sense_intronic MGP_NODShiLtJ_T0077180.1 MGP_NODShiLtJ_G0030539.1 mouse_genomes_project 6 56609404 56615009 + Cbx3 protein_coding retained_intron MGP_NODShiLtJ_T0077181.1 MGP_NODShiLtJ_G0030539.1 mouse_genomes_project 6 56609405 56623394 + MGP_NODShiLtJ_P0077181 Cbx3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0077182.1 MGP_NODShiLtJ_G0030539.1 mouse_genomes_project 6 56609418 56610802 + Cbx3 protein_coding retained_intron MGP_NODShiLtJ_T0077183.1 MGP_NODShiLtJ_G0030539.1 mouse_genomes_project 6 56609487 56618342 + MGP_NODShiLtJ_P0077183 Cbx3 protein_coding protein_coding MGP_NODShiLtJ_T0077184.1 MGP_NODShiLtJ_G0030539.1 mouse_genomes_project 6 56617202 56620125 + Cbx3 protein_coding retained_intron MGP_NODShiLtJ_T0018071.1 MGP_NODShiLtJ_G0015488.1 mouse_genomes_project 6 47253 64510 - processed_transcript lincRNA MGP_NODShiLtJ_T0018072.1 MGP_NODShiLtJ_G0015488.1 mouse_genomes_project 6 49629 64549 - processed_transcript lincRNA MGP_NODShiLtJ_T0018073.1 MGP_NODShiLtJ_G0015488.1 mouse_genomes_project 6 51788 64581 - processed_transcript retained_intron MGP_NODShiLtJ_T0080213.1 MGP_NODShiLtJ_G0031218.1 mouse_genomes_project 6 152138397 152222434 - MGP_NODShiLtJ_P0080213 Dusp16 protein_coding protein_coding MGP_NODShiLtJ_T0080214.1 MGP_NODShiLtJ_G0031218.1 mouse_genomes_project 6 152138402 152222584 - MGP_NODShiLtJ_P0080214 Dusp16 protein_coding protein_coding MGP_NODShiLtJ_T0080215.1 MGP_NODShiLtJ_G0031218.1 mouse_genomes_project 6 152140762 152189250 - MGP_NODShiLtJ_P0080215 Dusp16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080216.1 MGP_NODShiLtJ_G0031218.1 mouse_genomes_project 6 152141717 152148949 - Dusp16 protein_coding retained_intron MGP_NODShiLtJ_T0080217.1 MGP_NODShiLtJ_G0031218.1 mouse_genomes_project 6 152141869 152168648 - Dusp16 protein_coding processed_transcript MGP_NODShiLtJ_T0080218.1 MGP_NODShiLtJ_G0031218.1 mouse_genomes_project 6 152143524 152187034 - MGP_NODShiLtJ_P0080218 Dusp16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080219.1 MGP_NODShiLtJ_G0031218.1 mouse_genomes_project 6 152161076 152221267 - MGP_NODShiLtJ_P0080219 Dusp16 protein_coding protein_coding MGP_NODShiLtJ_T0100700.1 MGP_NODShiLtJ_G0039094.1 mouse_genomes_project 6 130329878 130330016 - Gm24008 snoRNA snoRNA MGP_NODShiLtJ_T0080313.1 MGP_NODShiLtJ_G0031239.1 mouse_genomes_project 6 154452282 154484635 + BC049715 protein_coding retained_intron MGP_NODShiLtJ_T0080314.1 MGP_NODShiLtJ_G0031239.1 mouse_genomes_project 6 154452636 154502796 + MGP_NODShiLtJ_P0080314 BC049715 protein_coding protein_coding MGP_NODShiLtJ_T0080315.1 MGP_NODShiLtJ_G0031239.1 mouse_genomes_project 6 154453491 154503534 + MGP_NODShiLtJ_P0080315 BC049715 protein_coding protein_coding MGP_NODShiLtJ_T0080317.1 MGP_NODShiLtJ_G0031239.1 mouse_genomes_project 6 154502761 154503505 + MGP_NODShiLtJ_P0080317 BC049715 protein_coding protein_coding MGP_NODShiLtJ_T0018074.1 MGP_NODShiLtJ_G0015489.1 mouse_genomes_project 6 5813724 5838209 - A430035B10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018075.1 MGP_NODShiLtJ_G0015489.1 mouse_genomes_project 6 5814862 5824027 - A430035B10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018076.1 MGP_NODShiLtJ_G0015489.1 mouse_genomes_project 6 5815969 5835117 - A430035B10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018077.1 MGP_NODShiLtJ_G0015489.1 mouse_genomes_project 6 5818460 5835060 - A430035B10Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018078.1 MGP_NODShiLtJ_G0015489.1 mouse_genomes_project 6 5833095 5835177 - A430035B10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0077673.1 MGP_NODShiLtJ_G0030675.1 mouse_genomes_project 6 80965589 81028421 + MGP_NODShiLtJ_P0077673 St3gal5 protein_coding protein_coding MGP_NODShiLtJ_T0077674.1 MGP_NODShiLtJ_G0030675.1 mouse_genomes_project 6 80965620 81028421 + MGP_NODShiLtJ_P0077674 St3gal5 protein_coding protein_coding MGP_NODShiLtJ_T0077675.1 MGP_NODShiLtJ_G0030675.1 mouse_genomes_project 6 80965754 81019712 + MGP_NODShiLtJ_P0077675 St3gal5 protein_coding protein_coding MGP_NODShiLtJ_T0077676.1 MGP_NODShiLtJ_G0030675.1 mouse_genomes_project 6 80983466 81013983 + MGP_NODShiLtJ_P0077676 St3gal5 protein_coding protein_coding MGP_NODShiLtJ_T0008508.1 MGP_NODShiLtJ_G0006871.1 mouse_genomes_project 6 53668857 53669907 + 4833403J16Rik lincRNA lincRNA MGP_NODShiLtJ_T0079512.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684423 137704490 - MGP_NODShiLtJ_P0079512 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079513.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684423 137704490 - MGP_NODShiLtJ_P0079513 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079514.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684430 137707127 - MGP_NODShiLtJ_P0079514 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079515.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684442 137707127 - MGP_NODShiLtJ_P0079515 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079516.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684442 137706341 - MGP_NODShiLtJ_P0079516 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079517.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684542 137707123 - MGP_NODShiLtJ_P0079517 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079518.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684995 137707090 - Phc1 protein_coding retained_intron MGP_NODShiLtJ_T0079519.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684995 137707090 - MGP_NODShiLtJ_P0079519 Phc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079520.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137684996 137709559 - MGP_NODShiLtJ_P0079520 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079521.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137692244 137704394 - MGP_NODShiLtJ_P0079521 Phc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079522.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137692636 137709504 - MGP_NODShiLtJ_P0079522 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079523.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137699382 137701856 - Phc1 protein_coding retained_intron MGP_NODShiLtJ_T0079524.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137700105 137709222 - MGP_NODShiLtJ_P0079524 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079525.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137700844 137707127 - MGP_NODShiLtJ_P0079525 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079526.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137700845 137704771 - MGP_NODShiLtJ_P0079526 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0079527.1 MGP_NODShiLtJ_G0031029.1 mouse_genomes_project 6 137700849 137707105 - MGP_NODShiLtJ_P0079527 Phc1 protein_coding protein_coding MGP_NODShiLtJ_T0099459.1 MGP_NODShiLtJ_G0037853.1 mouse_genomes_project 6 140516310 140516372 - Rnu7 snRNA snRNA MGP_NODShiLtJ_T0080574.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163790720 163857551 + MGP_NODShiLtJ_P0080574 Lrmp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080575.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163796792 163857557 + MGP_NODShiLtJ_P0080575 Lrmp protein_coding protein_coding MGP_NODShiLtJ_T0080576.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163796795 163851570 + Lrmp protein_coding retained_intron MGP_NODShiLtJ_T0080577.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163796834 163841288 + Lrmp protein_coding retained_intron MGP_NODShiLtJ_T0080578.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163814799 163840731 + MGP_NODShiLtJ_P0080578 Lrmp protein_coding protein_coding MGP_NODShiLtJ_T0080579.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163824412 163838949 + Lrmp protein_coding retained_intron MGP_NODShiLtJ_T0080580.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163824412 163841301 + MGP_NODShiLtJ_P0080580 Lrmp protein_coding protein_coding MGP_NODShiLtJ_T0080581.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163824415 163857551 + MGP_NODShiLtJ_P0080581 Lrmp protein_coding protein_coding MGP_NODShiLtJ_T0080582.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163838042 163854339 + Lrmp protein_coding processed_transcript MGP_NODShiLtJ_T0080583.1 MGP_NODShiLtJ_G0031288.1 mouse_genomes_project 6 163852163 163857301 + Lrmp protein_coding retained_intron MGP_NODShiLtJ_T0079047.1 MGP_NODShiLtJ_G0030946.1 mouse_genomes_project 6 128645686 128766903 + MGP_NODShiLtJ_P0079047 Slc6a11 protein_coding protein_coding MGP_NODShiLtJ_T0079048.1 MGP_NODShiLtJ_G0030946.1 mouse_genomes_project 6 128645864 128646881 + Slc6a11 protein_coding retained_intron MGP_NODShiLtJ_T0101176.1 MGP_NODShiLtJ_G0039495.1 mouse_genomes_project 6 74276781 74300014 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101177.1 MGP_NODShiLtJ_G0039495.1 mouse_genomes_project 6 74287247 74301120 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101178.1 MGP_NODShiLtJ_G0039495.1 mouse_genomes_project 6 74299781 74300514 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0078260.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98389440 98411701 + MGP_NODShiLtJ_P0078260 Nfu1 protein_coding protein_coding MGP_NODShiLtJ_T0078261.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98390040 98395971 + Nfu1 protein_coding retained_intron MGP_NODShiLtJ_T0078262.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98390040 98411694 + MGP_NODShiLtJ_P0078262 Nfu1 protein_coding protein_coding MGP_NODShiLtJ_T0078263.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98390040 98411699 + MGP_NODShiLtJ_P0078263 Nfu1 protein_coding protein_coding MGP_NODShiLtJ_T0078264.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98390084 98392592 + Nfu1 protein_coding retained_intron MGP_NODShiLtJ_T0078265.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98390093 98393703 + Nfu1 protein_coding retained_intron MGP_NODShiLtJ_T0078266.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98390093 98406446 + MGP_NODShiLtJ_P0078266 Nfu1 protein_coding protein_coding MGP_NODShiLtJ_T0078267.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98390207 98408794 + Nfu1 protein_coding processed_transcript MGP_NODShiLtJ_T0078268.1 MGP_NODShiLtJ_G0030790.1 mouse_genomes_project 6 98408254 98411701 + Nfu1 protein_coding retained_intron MGP_NODShiLtJ_T0076800.1 MGP_NODShiLtJ_G0030435.1 mouse_genomes_project 6 44980476 44983769 + MGP_NODShiLtJ_P0076800 Prss2 protein_coding protein_coding MGP_NODShiLtJ_T0076180.1 MGP_NODShiLtJ_G0030306.1 mouse_genomes_project 6 25712551 25737479 + MGP_NODShiLtJ_P0076180 Hyal6 protein_coding protein_coding MGP_NODShiLtJ_T0076911.1 MGP_NODShiLtJ_G0030479.1 mouse_genomes_project 6 46859682 46860624 + MGP_NODShiLtJ_P0076911 Olfr435 protein_coding protein_coding MGP_NODShiLtJ_T0099423.1 MGP_NODShiLtJ_G0037817.1 mouse_genomes_project 6 41117832 41117936 + Gm23231 snRNA snRNA MGP_NODShiLtJ_T0008555.1 MGP_NODShiLtJ_G0006909.1 mouse_genomes_project 6 80866339 80905724 - 9130221F21Rik lincRNA lincRNA MGP_NODShiLtJ_T0076981.1 MGP_NODShiLtJ_G0030495.1 mouse_genomes_project 6 52891646 52916754 - MGP_NODShiLtJ_P0076981 Zfp746 protein_coding protein_coding MGP_NODShiLtJ_T0076982.1 MGP_NODShiLtJ_G0030495.1 mouse_genomes_project 6 52891646 52916754 - MGP_NODShiLtJ_P0076982 Zfp746 protein_coding protein_coding MGP_NODShiLtJ_T0076983.1 MGP_NODShiLtJ_G0030495.1 mouse_genomes_project 6 52894002 52896612 - MGP_NODShiLtJ_P0076983 Zfp746 protein_coding protein_coding MGP_NODShiLtJ_T0076984.1 MGP_NODShiLtJ_G0030495.1 mouse_genomes_project 6 52895462 52912439 - Zfp746 protein_coding retained_intron MGP_NODShiLtJ_T0076985.1 MGP_NODShiLtJ_G0030495.1 mouse_genomes_project 6 52911782 52915371 - Zfp746 protein_coding retained_intron MGP_NODShiLtJ_T0076986.1 MGP_NODShiLtJ_G0030495.1 mouse_genomes_project 6 52915396 52916707 - Zfp746 protein_coding retained_intron MGP_NODShiLtJ_T0078691.1 MGP_NODShiLtJ_G0030882.1 mouse_genomes_project 6 109338832 109363591 + MGP_NODShiLtJ_P0078691 Arl6ip5 protein_coding protein_coding MGP_NODShiLtJ_T0076078.1 MGP_NODShiLtJ_G0030281.1 mouse_genomes_project 6 17410478 17455494 - MGP_NODShiLtJ_P0076078 Wnt2 protein_coding protein_coding MGP_NODShiLtJ_T0077185.1 MGP_NODShiLtJ_G0030540.1 mouse_genomes_project 6 56669153 56743469 + MGP_NODShiLtJ_P0077185 Snx10 protein_coding protein_coding MGP_NODShiLtJ_T0077186.1 MGP_NODShiLtJ_G0030540.1 mouse_genomes_project 6 56669234 56718505 + Snx10 protein_coding retained_intron MGP_NODShiLtJ_T0077187.1 MGP_NODShiLtJ_G0030540.1 mouse_genomes_project 6 56669528 56730642 + MGP_NODShiLtJ_P0077187 Snx10 protein_coding protein_coding MGP_NODShiLtJ_T0077188.1 MGP_NODShiLtJ_G0030540.1 mouse_genomes_project 6 56669553 56740076 + MGP_NODShiLtJ_P0077188 Snx10 protein_coding protein_coding MGP_NODShiLtJ_T0077189.1 MGP_NODShiLtJ_G0030540.1 mouse_genomes_project 6 56691846 56743460 + MGP_NODShiLtJ_P0077189 Snx10 protein_coding protein_coding MGP_NODShiLtJ_T0077190.1 MGP_NODShiLtJ_G0030540.1 mouse_genomes_project 6 56691847 56740712 + MGP_NODShiLtJ_P0077190 Snx10 protein_coding protein_coding MGP_NODShiLtJ_T0077191.1 MGP_NODShiLtJ_G0030540.1 mouse_genomes_project 6 56691889 56740683 + MGP_NODShiLtJ_P0077191 Snx10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0008627.1 MGP_NODShiLtJ_G0006964.1 mouse_genomes_project 6 127125977 127134811 + Gm26799 lincRNA lincRNA MGP_NODShiLtJ_T0101980.1 MGP_NODShiLtJ_G0040148.1 mouse_genomes_project 6 44100705 44174081 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015239.1 MGP_NODShiLtJ_G0013347.1 mouse_genomes_project 6 59092123 59092880 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001951.1 MGP_NODShiLtJ_G0001863.1 mouse_genomes_project 6 62505969 62508972 - TEC TEC MGP_NODShiLtJ_T0075816.1 MGP_NODShiLtJ_G0030233.1 mouse_genomes_project 6 847082 851628 + MGP_NODShiLtJ_P0075816 Gng11 protein_coding protein_coding MGP_NODShiLtJ_T0004989.1 MGP_NODShiLtJ_G0004257.1 mouse_genomes_project 6 113528648 113682332 + Gm43948 antisense antisense MGP_NODShiLtJ_T0000020.1 MGP_NODShiLtJ_G0000014.1 mouse_genomes_project 6 79453643 79454175 + MGP_NODShiLtJ_P0000020 Igkc IG_C_gene IG_C_gene MGP_NODShiLtJ_T0008523.1 MGP_NODShiLtJ_G0006882.1 mouse_genomes_project 6 56856184 56874076 - Gm44191 lincRNA lincRNA MGP_NODShiLtJ_T0001965.1 MGP_NODShiLtJ_G0001877.1 mouse_genomes_project 6 80679688 80680314 - TEC TEC MGP_NODShiLtJ_T0075970.1 MGP_NODShiLtJ_G0030265.1 mouse_genomes_project 6 11522819 11528155 + MGP_NODShiLtJ_P0075970 Tmem106b protein_coding protein_coding MGP_NODShiLtJ_T0075971.1 MGP_NODShiLtJ_G0030265.1 mouse_genomes_project 6 11522876 11525014 + MGP_NODShiLtJ_P0075971 Tmem106b protein_coding protein_coding MGP_NODShiLtJ_T0075972.1 MGP_NODShiLtJ_G0030265.1 mouse_genomes_project 6 11522899 11542849 + MGP_NODShiLtJ_P0075972 Tmem106b protein_coding protein_coding MGP_NODShiLtJ_T0075973.1 MGP_NODShiLtJ_G0030265.1 mouse_genomes_project 6 11522911 11528446 + Tmem106b protein_coding retained_intron MGP_NODShiLtJ_T0075974.1 MGP_NODShiLtJ_G0030265.1 mouse_genomes_project 6 11522914 11529431 + Tmem106b protein_coding processed_transcript MGP_NODShiLtJ_T0075975.1 MGP_NODShiLtJ_G0030265.1 mouse_genomes_project 6 11523311 11534713 + MGP_NODShiLtJ_P0075975 Tmem106b protein_coding protein_coding MGP_NODShiLtJ_T0076182.1 MGP_NODShiLtJ_G0030308.1 mouse_genomes_project 6 25788337 25799649 + MGP_NODShiLtJ_P0076182 Spam1 protein_coding protein_coding MGP_NODShiLtJ_T0076183.1 MGP_NODShiLtJ_G0030308.1 mouse_genomes_project 6 25788350 25799649 + MGP_NODShiLtJ_P0076183 Spam1 protein_coding protein_coding MGP_NODShiLtJ_T0076184.1 MGP_NODShiLtJ_G0030308.1 mouse_genomes_project 6 25788364 25795101 + Spam1 protein_coding retained_intron MGP_NODShiLtJ_T0076185.1 MGP_NODShiLtJ_G0030308.1 mouse_genomes_project 6 25793874 25799649 + MGP_NODShiLtJ_P0076185 Spam1 protein_coding protein_coding MGP_NODShiLtJ_T0002042.1 MGP_NODShiLtJ_G0001954.1 mouse_genomes_project 6 103534799 103535860 - TEC TEC MGP_NODShiLtJ_T0002054.1 MGP_NODShiLtJ_G0001966.1 mouse_genomes_project 6 112626720 112629240 - TEC TEC MGP_NODShiLtJ_T0008607.1 MGP_NODShiLtJ_G0006949.1 mouse_genomes_project 6 110774779 110792175 - Gm44197 lincRNA lincRNA MGP_NODShiLtJ_T0002686.1 MGP_NODShiLtJ_G0002559.1 mouse_genomes_project 6 44439218 44439507 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0078492.1 MGP_NODShiLtJ_G0030843.1 mouse_genomes_project 6 101942732 101958328 + MGP_NODShiLtJ_P0078492 Zxdc protein_coding protein_coding MGP_NODShiLtJ_T0078493.1 MGP_NODShiLtJ_G0030843.1 mouse_genomes_project 6 101942734 101977424 + MGP_NODShiLtJ_P0078493 Zxdc protein_coding protein_coding MGP_NODShiLtJ_T0078494.1 MGP_NODShiLtJ_G0030843.1 mouse_genomes_project 6 101942848 101957459 + MGP_NODShiLtJ_P0078494 Zxdc protein_coding protein_coding MGP_NODShiLtJ_T0078495.1 MGP_NODShiLtJ_G0030843.1 mouse_genomes_project 6 101942853 101956347 + MGP_NODShiLtJ_P0078495 Zxdc protein_coding protein_coding MGP_NODShiLtJ_T0078496.1 MGP_NODShiLtJ_G0030843.1 mouse_genomes_project 6 101942858 101947792 + Zxdc protein_coding retained_intron MGP_NODShiLtJ_T0002120.1 MGP_NODShiLtJ_G0002032.1 mouse_genomes_project 6 155350625 155352221 - TEC TEC MGP_NODShiLtJ_T0080502.1 MGP_NODShiLtJ_G0031276.1 mouse_genomes_project 6 160877507 160882159 + MGP_NODShiLtJ_P0080502 Spx protein_coding protein_coding MGP_NODShiLtJ_T0080503.1 MGP_NODShiLtJ_G0031276.1 mouse_genomes_project 6 160877507 160882159 + MGP_NODShiLtJ_P0080503 Spx protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080504.1 MGP_NODShiLtJ_G0031276.1 mouse_genomes_project 6 160878080 160883332 + Spx protein_coding retained_intron MGP_NODShiLtJ_T0080505.1 MGP_NODShiLtJ_G0031276.1 mouse_genomes_project 6 160878605 160883332 + Spx protein_coding retained_intron MGP_NODShiLtJ_T0015205.1 MGP_NODShiLtJ_G0013313.1 mouse_genomes_project 6 51451741 51452189 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101995.1 MGP_NODShiLtJ_G0040163.1 mouse_genomes_project 6 62944553 62944911 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002013.1 MGP_NODShiLtJ_G0001925.1 mouse_genomes_project 6 98643912 98647280 - TEC TEC MGP_NODShiLtJ_T0002004.1 MGP_NODShiLtJ_G0001916.1 mouse_genomes_project 6 97836984 97840147 + TEC TEC MGP_NODShiLtJ_T0015397.1 MGP_NODShiLtJ_G0013505.1 mouse_genomes_project 6 117384850 117385302 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010698.1 MGP_NODShiLtJ_G0008831.1 mouse_genomes_project 6 135034706 135034790 - Mir706 miRNA miRNA MGP_NODShiLtJ_T0001928.1 MGP_NODShiLtJ_G0001840.1 mouse_genomes_project 6 50395104 50397870 + TEC TEC MGP_NODShiLtJ_T0010639.1 MGP_NODShiLtJ_G0008772.1 mouse_genomes_project 6 515586 515693 - Mir489 miRNA miRNA MGP_NODShiLtJ_T0102028.1 MGP_NODShiLtJ_G0040196.1 mouse_genomes_project 6 139756049 139756953 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008591.1 MGP_NODShiLtJ_G0006936.1 mouse_genomes_project 6 100690422 100691755 - lincRNA lincRNA MGP_NODShiLtJ_T0004917.1 MGP_NODShiLtJ_G0004215.1 mouse_genomes_project 6 80813408 80816260 - Gm26628 antisense antisense MGP_NODShiLtJ_T0002003.1 MGP_NODShiLtJ_G0001915.1 mouse_genomes_project 6 97586622 97588982 - TEC TEC MGP_NODShiLtJ_T0076915.1 MGP_NODShiLtJ_G0030482.1 mouse_genomes_project 6 46965059 46988736 + MGP_NODShiLtJ_P0076915 Arhgef5 protein_coding protein_coding MGP_NODShiLtJ_T0076916.1 MGP_NODShiLtJ_G0030482.1 mouse_genomes_project 6 46973926 46988735 + MGP_NODShiLtJ_P0076916 Arhgef5 protein_coding protein_coding MGP_NODShiLtJ_T0076917.1 MGP_NODShiLtJ_G0030482.1 mouse_genomes_project 6 46976353 46979336 + Arhgef5 protein_coding retained_intron MGP_NODShiLtJ_T0076918.1 MGP_NODShiLtJ_G0030482.1 mouse_genomes_project 6 46976462 46986611 + Arhgef5 protein_coding retained_intron MGP_NODShiLtJ_T0076919.1 MGP_NODShiLtJ_G0030482.1 mouse_genomes_project 6 46978872 46988732 + Arhgef5 protein_coding retained_intron MGP_NODShiLtJ_T0076920.1 MGP_NODShiLtJ_G0030482.1 mouse_genomes_project 6 46980405 46982982 + Arhgef5 protein_coding retained_intron MGP_NODShiLtJ_T0076921.1 MGP_NODShiLtJ_G0030482.1 mouse_genomes_project 6 46982029 46988731 + Arhgef5 protein_coding retained_intron MGP_NODShiLtJ_T0076922.1 MGP_NODShiLtJ_G0030482.1 mouse_genomes_project 6 46982297 46983431 + Arhgef5 protein_coding retained_intron MGP_NODShiLtJ_T0076148.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24045783 24698429 - MGP_NODShiLtJ_P0076148 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076149.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24045783 24698430 - MGP_NODShiLtJ_P0076149 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076150.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24045783 24698198 - MGP_NODShiLtJ_P0076150 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076151.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24045833 24698234 - MGP_NODShiLtJ_P0076151 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076152.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24045848 24698146 - MGP_NODShiLtJ_P0076152 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076153.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24045849 24698233 - MGP_NODShiLtJ_P0076153 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076154.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24045853 24147704 - Cadps2 protein_coding processed_transcript MGP_NODShiLtJ_T0076155.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24046501 24417381 - MGP_NODShiLtJ_P0076155 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076156.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24046501 24698152 - MGP_NODShiLtJ_P0076156 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076157.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24046506 24101360 - Cadps2 protein_coding processed_transcript MGP_NODShiLtJ_T0076158.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24216903 24698272 - MGP_NODShiLtJ_P0076158 Cadps2 protein_coding protein_coding MGP_NODShiLtJ_T0076159.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24411677 24698309 - Cadps2 protein_coding retained_intron MGP_NODShiLtJ_T0076163.1 MGP_NODShiLtJ_G0030296.1 mouse_genomes_project 6 24524579 24698271 - Cadps2 protein_coding retained_intron MGP_NODShiLtJ_T0015237.1 MGP_NODShiLtJ_G0013345.1 mouse_genomes_project 6 58323801 58324341 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000042.1 MGP_NODShiLtJ_G0000035.1 mouse_genomes_project 6 79449770 79449808 + MGP_NODShiLtJ_P0000042 Igkj1 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0015261.1 MGP_NODShiLtJ_G0013369.1 mouse_genomes_project 6 70093021 70093547 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015226.1 MGP_NODShiLtJ_G0013334.1 mouse_genomes_project 6 54884993 54885736 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078583.1 MGP_NODShiLtJ_G0030858.1 mouse_genomes_project 6 103413135 103499845 - MGP_NODShiLtJ_P0078583 Grip2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078584.1 MGP_NODShiLtJ_G0030858.1 mouse_genomes_project 6 103413139 103482527 - MGP_NODShiLtJ_P0078584 Grip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078585.1 MGP_NODShiLtJ_G0030858.1 mouse_genomes_project 6 103413139 103460114 - MGP_NODShiLtJ_P0078585 Grip2 protein_coding protein_coding MGP_NODShiLtJ_T0078586.1 MGP_NODShiLtJ_G0030858.1 mouse_genomes_project 6 103415078 103459976 - MGP_NODShiLtJ_P0078586 Grip2 protein_coding protein_coding MGP_NODShiLtJ_T0078587.1 MGP_NODShiLtJ_G0030858.1 mouse_genomes_project 6 103435291 103460051 - MGP_NODShiLtJ_P0078587 Grip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078588.1 MGP_NODShiLtJ_G0030858.1 mouse_genomes_project 6 103436358 103448904 - MGP_NODShiLtJ_P0078588 Grip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078589.1 MGP_NODShiLtJ_G0030858.1 mouse_genomes_project 6 103445365 103448920 - Grip2 protein_coding retained_intron MGP_NODShiLtJ_T0018155.1 MGP_NODShiLtJ_G0015514.1 mouse_genomes_project 6 141086792 141112430 + processed_transcript antisense MGP_NODShiLtJ_T0018156.1 MGP_NODShiLtJ_G0015514.1 mouse_genomes_project 6 141086841 141087845 + processed_transcript retained_intron MGP_NODShiLtJ_T0018157.1 MGP_NODShiLtJ_G0015514.1 mouse_genomes_project 6 141086861 141091803 + processed_transcript antisense MGP_NODShiLtJ_T0018158.1 MGP_NODShiLtJ_G0015514.1 mouse_genomes_project 6 141086935 141094789 + processed_transcript antisense MGP_NODShiLtJ_T0004972.1 MGP_NODShiLtJ_G0004246.1 mouse_genomes_project 6 100195493 100204943 - Gm26588 antisense antisense MGP_NODShiLtJ_T0004973.1 MGP_NODShiLtJ_G0004246.1 mouse_genomes_project 6 100198313 100203583 - Gm26588 antisense antisense MGP_NODShiLtJ_T0005056.1 MGP_NODShiLtJ_G0004310.1 mouse_genomes_project 6 156324791 156346226 + Gm30332 antisense antisense MGP_NODShiLtJ_T0015352.1 MGP_NODShiLtJ_G0013460.1 mouse_genomes_project 6 97210572 97211416 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078837.1 MGP_NODShiLtJ_G0030909.1 mouse_genomes_project 6 122590758 122634136 + MGP_NODShiLtJ_P0078837 Arl8b protein_coding protein_coding MGP_NODShiLtJ_T0076702.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42497000 42540973 - MGP_NODShiLtJ_P0076702 Slc37a3 protein_coding protein_coding MGP_NODShiLtJ_T0076703.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42498212 42540970 - MGP_NODShiLtJ_P0076703 Slc37a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076704.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42498213 42509874 - Slc37a3 protein_coding processed_transcript MGP_NODShiLtJ_T0076705.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42498216 42536228 - MGP_NODShiLtJ_P0076705 Slc37a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076706.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42498833 42509278 - Slc37a3 protein_coding processed_transcript MGP_NODShiLtJ_T0076707.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42505809 42509250 - Slc37a3 protein_coding retained_intron MGP_NODShiLtJ_T0076708.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42518003 42540957 - MGP_NODShiLtJ_P0076708 Slc37a3 protein_coding protein_coding MGP_NODShiLtJ_T0076709.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42520485 42540970 - MGP_NODShiLtJ_P0076709 Slc37a3 protein_coding protein_coding MGP_NODShiLtJ_T0076710.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42522709 42540945 - MGP_NODShiLtJ_P0076710 Slc37a3 protein_coding protein_coding MGP_NODShiLtJ_T0076711.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42522734 42540934 - MGP_NODShiLtJ_P0076711 Slc37a3 protein_coding protein_coding MGP_NODShiLtJ_T0076712.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42522736 42540960 - MGP_NODShiLtJ_P0076712 Slc37a3 protein_coding protein_coding MGP_NODShiLtJ_T0076713.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42530423 42540955 - MGP_NODShiLtJ_P0076713 Slc37a3 protein_coding protein_coding MGP_NODShiLtJ_T0076714.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42531193 42540937 - Slc37a3 protein_coding processed_transcript MGP_NODShiLtJ_T0076715.1 MGP_NODShiLtJ_G0030403.1 mouse_genomes_project 6 42531202 42540916 - Slc37a3 protein_coding processed_transcript MGP_NODShiLtJ_T0079107.1 MGP_NODShiLtJ_G0030956.1 mouse_genomes_project 6 130139362 130150421 + MGP_NODShiLtJ_P0079107 Tsen2 protein_coding protein_coding MGP_NODShiLtJ_T0079108.1 MGP_NODShiLtJ_G0030956.1 mouse_genomes_project 6 130139362 130174696 + MGP_NODShiLtJ_P0079108 Tsen2 protein_coding protein_coding MGP_NODShiLtJ_T0079109.1 MGP_NODShiLtJ_G0030956.1 mouse_genomes_project 6 130139400 130155908 + Tsen2 protein_coding processed_transcript MGP_NODShiLtJ_T0079110.1 MGP_NODShiLtJ_G0030956.1 mouse_genomes_project 6 130139404 130148510 + Tsen2 protein_coding retained_intron MGP_NODShiLtJ_T0079111.1 MGP_NODShiLtJ_G0030956.1 mouse_genomes_project 6 130170515 130174059 + Tsen2 protein_coding retained_intron MGP_NODShiLtJ_T0008579.1 MGP_NODShiLtJ_G0006927.1 mouse_genomes_project 6 97835569 97836253 - Gm43936 lincRNA lincRNA MGP_NODShiLtJ_T0015124.1 MGP_NODShiLtJ_G0013232.1 mouse_genomes_project 6 5698580 5700374 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080239.1 MGP_NODShiLtJ_G0031222.1 mouse_genomes_project 6 152455983 152461140 + MGP_NODShiLtJ_P0080239 Apold1 protein_coding protein_coding MGP_NODShiLtJ_T0015532.1 MGP_NODShiLtJ_G0013640.1 mouse_genomes_project 6 161675712 161675915 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076698.1 MGP_NODShiLtJ_G0030401.1 mouse_genomes_project 6 42233494 42267519 - MGP_NODShiLtJ_P0076698 Parp12 protein_coding protein_coding MGP_NODShiLtJ_T0076699.1 MGP_NODShiLtJ_G0030401.1 mouse_genomes_project 6 42236100 42238835 - Parp12 protein_coding retained_intron MGP_NODShiLtJ_T0015481.1 MGP_NODShiLtJ_G0013589.1 mouse_genomes_project 6 144785344 144785458 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079034.1 MGP_NODShiLtJ_G0030944.1 mouse_genomes_project 6 128228023 128240791 - MGP_NODShiLtJ_P0079034 Sec13 protein_coding protein_coding MGP_NODShiLtJ_T0079035.1 MGP_NODShiLtJ_G0030944.1 mouse_genomes_project 6 128230416 128235118 - Sec13 protein_coding retained_intron MGP_NODShiLtJ_T0079036.1 MGP_NODShiLtJ_G0030944.1 mouse_genomes_project 6 128230582 128235118 - Sec13 protein_coding retained_intron MGP_NODShiLtJ_T0079037.1 MGP_NODShiLtJ_G0030944.1 mouse_genomes_project 6 128239176 128240775 - Sec13 protein_coding retained_intron MGP_NODShiLtJ_T0077540.1 MGP_NODShiLtJ_G0030643.1 mouse_genomes_project 6 74662745 74663781 - MGP_NODShiLtJ_P0077540 Vmn1r33 protein_coding protein_coding MGP_NODShiLtJ_T0077161.1 MGP_NODShiLtJ_G0030534.1 mouse_genomes_project 6 55646535 55652007 - MGP_NODShiLtJ_P0077161 protein_coding protein_coding MGP_NODShiLtJ_T0098068.1 MGP_NODShiLtJ_G0036480.1 mouse_genomes_project 6 126642372 126642472 - n-R5s165 rRNA rRNA MGP_NODShiLtJ_T0076667.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41645642 41647973 + Luc7l2 protein_coding processed_transcript MGP_NODShiLtJ_T0076668.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41646374 41715951 + MGP_NODShiLtJ_P0076668 Luc7l2 protein_coding protein_coding MGP_NODShiLtJ_T0076669.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41646374 41710624 + MGP_NODShiLtJ_P0076669 Luc7l2 protein_coding protein_coding MGP_NODShiLtJ_T0076670.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41646374 41708134 + MGP_NODShiLtJ_P0076670 Luc7l2 protein_coding protein_coding MGP_NODShiLtJ_T0076671.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41646385 41715949 + MGP_NODShiLtJ_P0076671 Luc7l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076672.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41646402 41652054 + Luc7l2 protein_coding processed_transcript MGP_NODShiLtJ_T0076673.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41646402 41652185 + Luc7l2 protein_coding retained_intron MGP_NODShiLtJ_T0076674.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41646674 41714642 + MGP_NODShiLtJ_P0076674 Luc7l2 protein_coding protein_coding MGP_NODShiLtJ_T0076675.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41646714 41685516 + Luc7l2 protein_coding processed_transcript MGP_NODShiLtJ_T0076676.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41649858 41691121 + MGP_NODShiLtJ_P0076676 Luc7l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076677.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41651776 41712957 + MGP_NODShiLtJ_P0076677 Luc7l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076678.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41653794 41667918 + Luc7l2 protein_coding retained_intron MGP_NODShiLtJ_T0076679.1 MGP_NODShiLtJ_G0030396.1 mouse_genomes_project 6 41668454 41710065 + Luc7l2 protein_coding retained_intron MGP_NODShiLtJ_T0102031.1 MGP_NODShiLtJ_G0040198.1 mouse_genomes_project 6 145203590 145203704 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100708.1 MGP_NODShiLtJ_G0039102.1 mouse_genomes_project 6 139133057 139133189 + Gm25891 snoRNA snoRNA MGP_NODShiLtJ_T0002084.1 MGP_NODShiLtJ_G0001996.1 mouse_genomes_project 6 131350055 131352792 + TEC TEC MGP_NODShiLtJ_T0000172.1 MGP_NODShiLtJ_G0000126.1 mouse_genomes_project 6 76916089 76916555 + MGP_NODShiLtJ_P0000172 Igkv14-100 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000173.1 MGP_NODShiLtJ_G0000126.1 mouse_genomes_project 6 76916089 76916555 + MGP_NODShiLtJ_P0000173 Igkv14-100 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0078242.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98099578 98131470 - MGP_NODShiLtJ_P0078242 Anxa4 protein_coding protein_coding MGP_NODShiLtJ_T0078243.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98099579 98162830 - MGP_NODShiLtJ_P0078243 Anxa4 protein_coding protein_coding MGP_NODShiLtJ_T0078244.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98099585 98131384 - MGP_NODShiLtJ_P0078244 Anxa4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078245.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98100393 98107860 - Anxa4 protein_coding retained_intron MGP_NODShiLtJ_T0078246.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98100464 98126269 - MGP_NODShiLtJ_P0078246 Anxa4 protein_coding protein_coding MGP_NODShiLtJ_T0078247.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98104699 98131367 - MGP_NODShiLtJ_P0078247 Anxa4 protein_coding protein_coding MGP_NODShiLtJ_T0078248.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98104706 98162810 - MGP_NODShiLtJ_P0078248 Anxa4 protein_coding protein_coding MGP_NODShiLtJ_T0078249.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98105931 98162810 - MGP_NODShiLtJ_P0078249 Anxa4 protein_coding protein_coding MGP_NODShiLtJ_T0078250.1 MGP_NODShiLtJ_G0030788.1 mouse_genomes_project 6 98111448 98131470 - Anxa4 protein_coding retained_intron MGP_NODShiLtJ_T0001898.1 MGP_NODShiLtJ_G0001810.1 mouse_genomes_project 6 30872996 30876285 + TEC TEC MGP_NODShiLtJ_T0078185.1 MGP_NODShiLtJ_G0030779.1 mouse_genomes_project 6 97721801 97732883 - MGP_NODShiLtJ_P0078185 Pcyox1 protein_coding protein_coding MGP_NODShiLtJ_T0078186.1 MGP_NODShiLtJ_G0030779.1 mouse_genomes_project 6 97724452 97732870 - MGP_NODShiLtJ_P0078186 Pcyox1 protein_coding protein_coding MGP_NODShiLtJ_T0078187.1 MGP_NODShiLtJ_G0030779.1 mouse_genomes_project 6 97724770 97728123 - MGP_NODShiLtJ_P0078187 Pcyox1 protein_coding protein_coding MGP_NODShiLtJ_T0078188.1 MGP_NODShiLtJ_G0030779.1 mouse_genomes_project 6 97727463 97732872 - MGP_NODShiLtJ_P0078188 Pcyox1 protein_coding protein_coding MGP_NODShiLtJ_T0078189.1 MGP_NODShiLtJ_G0030779.1 mouse_genomes_project 6 97730211 97732355 - Pcyox1 protein_coding retained_intron MGP_NODShiLtJ_T0078190.1 MGP_NODShiLtJ_G0030779.1 mouse_genomes_project 6 97731511 97732848 - Pcyox1 protein_coding retained_intron MGP_NODShiLtJ_T0008503.1 MGP_NODShiLtJ_G0006866.1 mouse_genomes_project 6 52355320 52360363 + Gm26625 lincRNA lincRNA MGP_NODShiLtJ_T0008695.1 MGP_NODShiLtJ_G0007015.1 mouse_genomes_project 6 162170671 162235141 - 1700060C16Rik lincRNA lincRNA MGP_NODShiLtJ_T0077680.1 MGP_NODShiLtJ_G0030677.1 mouse_genomes_project 6 81202937 81212280 + MGP_NODShiLtJ_P0077680 Sftpb protein_coding protein_coding MGP_NODShiLtJ_T0077681.1 MGP_NODShiLtJ_G0030677.1 mouse_genomes_project 6 81202947 81212276 + MGP_NODShiLtJ_P0077681 Sftpb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077682.1 MGP_NODShiLtJ_G0030677.1 mouse_genomes_project 6 81202952 81210945 + MGP_NODShiLtJ_P0077682 Sftpb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077683.1 MGP_NODShiLtJ_G0030677.1 mouse_genomes_project 6 81202952 81210945 + MGP_NODShiLtJ_P0077683 Sftpb protein_coding protein_coding MGP_NODShiLtJ_T0077684.1 MGP_NODShiLtJ_G0030677.1 mouse_genomes_project 6 81204439 81212005 + Sftpb protein_coding retained_intron MGP_NODShiLtJ_T0076755.1 MGP_NODShiLtJ_G0030414.1 mouse_genomes_project 6 43655396 43691993 - MGP_NODShiLtJ_P0076755 E330009J07Rik protein_coding protein_coding MGP_NODShiLtJ_T0076756.1 MGP_NODShiLtJ_G0030414.1 mouse_genomes_project 6 43661521 43691991 - MGP_NODShiLtJ_P0076756 E330009J07Rik protein_coding protein_coding MGP_NODShiLtJ_T0076757.1 MGP_NODShiLtJ_G0030414.1 mouse_genomes_project 6 43674391 43687268 - MGP_NODShiLtJ_P0076757 E330009J07Rik protein_coding protein_coding MGP_NODShiLtJ_T0076758.1 MGP_NODShiLtJ_G0030414.1 mouse_genomes_project 6 43679321 43691973 - E330009J07Rik protein_coding retained_intron MGP_NODShiLtJ_T0076015.1 MGP_NODShiLtJ_G0030273.1 mouse_genomes_project 6 14746480 14831706 + MGP_NODShiLtJ_P0076015 Mdfic protein_coding protein_coding MGP_NODShiLtJ_T0076016.1 MGP_NODShiLtJ_G0030273.1 mouse_genomes_project 6 14746480 14831710 + MGP_NODShiLtJ_P0076016 Mdfic protein_coding protein_coding MGP_NODShiLtJ_T0076017.1 MGP_NODShiLtJ_G0030273.1 mouse_genomes_project 6 14746522 14799512 + MGP_NODShiLtJ_P0076017 Mdfic protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076018.1 MGP_NODShiLtJ_G0030273.1 mouse_genomes_project 6 14746540 14801581 + MGP_NODShiLtJ_P0076018 Mdfic protein_coding protein_coding MGP_NODShiLtJ_T0076019.1 MGP_NODShiLtJ_G0030273.1 mouse_genomes_project 6 14746906 14830349 + MGP_NODShiLtJ_P0076019 Mdfic protein_coding protein_coding MGP_NODShiLtJ_T0076020.1 MGP_NODShiLtJ_G0030273.1 mouse_genomes_project 6 14753610 14798626 + MGP_NODShiLtJ_P0076020 Mdfic protein_coding protein_coding MGP_NODShiLtJ_T0076789.1 MGP_NODShiLtJ_G0030426.1 mouse_genomes_project 6 44217999 44224991 - MGP_NODShiLtJ_P0076789 Prss58 protein_coding protein_coding MGP_NODShiLtJ_T0011520.1 MGP_NODShiLtJ_G0009653.1 mouse_genomes_project 6 17327644 17327781 + Gm27444 misc_RNA misc_RNA MGP_NODShiLtJ_T0102039.1 MGP_NODShiLtJ_G0040206.1 mouse_genomes_project 6 149058307 149061093 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008616.1 MGP_NODShiLtJ_G0006955.1 mouse_genomes_project 6 113491688 113554701 + Gm43950 lincRNA lincRNA MGP_NODShiLtJ_T0008485.1 MGP_NODShiLtJ_G0006859.1 mouse_genomes_project 6 37857387 37869066 + 1810058I24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008486.1 MGP_NODShiLtJ_G0006859.1 mouse_genomes_project 6 37857449 37866371 + 1810058I24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008487.1 MGP_NODShiLtJ_G0006859.1 mouse_genomes_project 6 37857465 37866744 + 1810058I24Rik lincRNA lincRNA MGP_NODShiLtJ_T0077730.1 MGP_NODShiLtJ_G0030686.1 mouse_genomes_project 6 81437582 81439215 - Sh2d6 protein_coding processed_transcript MGP_NODShiLtJ_T0077731.1 MGP_NODShiLtJ_G0030686.1 mouse_genomes_project 6 81437592 81444914 - MGP_NODShiLtJ_P0077731 Sh2d6 protein_coding protein_coding MGP_NODShiLtJ_T0077732.1 MGP_NODShiLtJ_G0030686.1 mouse_genomes_project 6 81437594 81445003 - MGP_NODShiLtJ_P0077732 Sh2d6 protein_coding protein_coding MGP_NODShiLtJ_T0077733.1 MGP_NODShiLtJ_G0030686.1 mouse_genomes_project 6 81437863 81444250 - MGP_NODShiLtJ_P0077733 Sh2d6 protein_coding protein_coding MGP_NODShiLtJ_T0077734.1 MGP_NODShiLtJ_G0030686.1 mouse_genomes_project 6 81439251 81444345 - Sh2d6 protein_coding processed_transcript MGP_NODShiLtJ_T0077735.1 MGP_NODShiLtJ_G0030686.1 mouse_genomes_project 6 81441312 81446016 - Sh2d6 protein_coding retained_intron MGP_NODShiLtJ_T0015267.1 MGP_NODShiLtJ_G0013375.1 mouse_genomes_project 6 72881110 72881672 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076875.1 MGP_NODShiLtJ_G0030458.1 mouse_genomes_project 6 45949002 45949932 + MGP_NODShiLtJ_P0076875 Tas2r126 protein_coding protein_coding MGP_NODShiLtJ_T0015473.1 MGP_NODShiLtJ_G0013581.1 mouse_genomes_project 6 143242581 143243392 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010640.1 MGP_NODShiLtJ_G0008773.1 mouse_genomes_project 6 14389041 14389152 + Gm25470 miRNA miRNA MGP_NODShiLtJ_T0002629.1 MGP_NODShiLtJ_G0002512.1 mouse_genomes_project 6 44467263 44467725 + MGP_NODShiLtJ_P0002629 Trbv13-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002630.1 MGP_NODShiLtJ_G0002512.1 mouse_genomes_project 6 44467292 44467725 + MGP_NODShiLtJ_P0002630 Trbv13-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0008538.1 MGP_NODShiLtJ_G0006893.1 mouse_genomes_project 6 62103053 62179418 - Gm8239 lincRNA lincRNA MGP_NODShiLtJ_T0015376.1 MGP_NODShiLtJ_G0013484.1 mouse_genomes_project 6 107930827 107932016 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008601.1 MGP_NODShiLtJ_G0006944.1 mouse_genomes_project 6 103047399 103059009 - 4930471M09Rik lincRNA lincRNA MGP_NODShiLtJ_T0008602.1 MGP_NODShiLtJ_G0006944.1 mouse_genomes_project 6 103057077 103059067 - 4930471M09Rik lincRNA lincRNA MGP_NODShiLtJ_T0002095.1 MGP_NODShiLtJ_G0002007.1 mouse_genomes_project 6 142509335 142509866 - TEC TEC MGP_NODShiLtJ_T0010654.1 MGP_NODShiLtJ_G0008787.1 mouse_genomes_project 6 33354799 33354887 - Mir29a miRNA miRNA MGP_NODShiLtJ_T0004857.1 MGP_NODShiLtJ_G0004167.1 mouse_genomes_project 6 22397015 22398081 + Gm42582 antisense antisense MGP_NODShiLtJ_T0000309.1 MGP_NODShiLtJ_G0000247.1 mouse_genomes_project 6 78076330 78076789 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0004897.1 MGP_NODShiLtJ_G0004199.1 mouse_genomes_project 6 57377641 57378788 + Gm15050 antisense antisense MGP_NODShiLtJ_T0080359.1 MGP_NODShiLtJ_G0031249.1 mouse_genomes_project 6 155517562 155537640 + MGP_NODShiLtJ_P0080359 Strap protein_coding protein_coding MGP_NODShiLtJ_T0080360.1 MGP_NODShiLtJ_G0031249.1 mouse_genomes_project 6 155529049 155534461 + Strap protein_coding processed_transcript MGP_NODShiLtJ_T0080361.1 MGP_NODShiLtJ_G0031249.1 mouse_genomes_project 6 155534932 155536384 + Strap protein_coding retained_intron MGP_NODShiLtJ_T0008513.1 MGP_NODShiLtJ_G0006875.1 mouse_genomes_project 6 55866868 55906991 + C530044C16Rik lincRNA lincRNA MGP_NODShiLtJ_T0008514.1 MGP_NODShiLtJ_G0006875.1 mouse_genomes_project 6 55867077 55907130 + C530044C16Rik lincRNA lincRNA MGP_NODShiLtJ_T0015348.1 MGP_NODShiLtJ_G0013456.1 mouse_genomes_project 6 96301821 96302399 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008489.1 MGP_NODShiLtJ_G0006861.1 mouse_genomes_project 6 38246491 38251064 - Gm42931 lincRNA lincRNA MGP_NODShiLtJ_T0076330.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 31945441 31946158 + MGP_NODShiLtJ_P0076330 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076331.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 31945873 32055710 + Ahcyl2 protein_coding retained_intron MGP_NODShiLtJ_T0076332.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 31945922 32103373 + MGP_NODShiLtJ_P0076332 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076333.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 31945928 31948074 + Ahcyl2 protein_coding retained_intron MGP_NODShiLtJ_T0076334.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 31945941 32103379 + MGP_NODShiLtJ_P0076334 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076335.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 31945958 32058914 + MGP_NODShiLtJ_P0076335 Ahcyl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076336.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 31980856 32072902 + MGP_NODShiLtJ_P0076336 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076337.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32042030 32100278 + MGP_NODShiLtJ_P0076337 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076338.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32042037 32051527 + MGP_NODShiLtJ_P0076338 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076339.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32042039 32058926 + MGP_NODShiLtJ_P0076339 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076340.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32042044 32069808 + MGP_NODShiLtJ_P0076340 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076341.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32042161 32055710 + Ahcyl2 protein_coding retained_intron MGP_NODShiLtJ_T0076342.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32047669 32103367 + MGP_NODShiLtJ_P0076342 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076343.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32047975 32072911 + MGP_NODShiLtJ_P0076343 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076344.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32048000 32072904 + MGP_NODShiLtJ_P0076344 Ahcyl2 protein_coding protein_coding MGP_NODShiLtJ_T0076345.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32053677 32059516 + Ahcyl2 protein_coding processed_transcript MGP_NODShiLtJ_T0076346.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32058589 32103372 + Ahcyl2 protein_coding retained_intron MGP_NODShiLtJ_T0076347.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32065020 32068429 + Ahcyl2 protein_coding retained_intron MGP_NODShiLtJ_T0076348.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32083870 32086276 + Ahcyl2 protein_coding retained_intron MGP_NODShiLtJ_T0076349.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32087453 32100118 + Ahcyl2 protein_coding retained_intron MGP_NODShiLtJ_T0076350.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32094158 32100270 + Ahcyl2 protein_coding processed_transcript MGP_NODShiLtJ_T0076351.1 MGP_NODShiLtJ_G0030339.1 mouse_genomes_project 6 32094630 32100214 + Ahcyl2 protein_coding processed_transcript MGP_NODShiLtJ_T0002524.1 MGP_NODShiLtJ_G0002425.1 mouse_genomes_project 6 45005203 45005250 + MGP_NODShiLtJ_P0002524 Trbj2-7 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002510.1 MGP_NODShiLtJ_G0002413.1 mouse_genomes_project 6 44993381 44993429 + MGP_NODShiLtJ_P0002510 Trbj1-1 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0076832.1 MGP_NODShiLtJ_G0030449.1 mouse_genomes_project 6 45755025 45759532 + MGP_NODShiLtJ_P0076832 Gstk1 protein_coding protein_coding MGP_NODShiLtJ_T0076833.1 MGP_NODShiLtJ_G0030449.1 mouse_genomes_project 6 45755069 45759532 + MGP_NODShiLtJ_P0076833 Gstk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076834.1 MGP_NODShiLtJ_G0030449.1 mouse_genomes_project 6 45755079 45759538 + Gstk1 protein_coding retained_intron MGP_NODShiLtJ_T0076835.1 MGP_NODShiLtJ_G0030449.1 mouse_genomes_project 6 45755113 45759410 + Gstk1 protein_coding processed_transcript MGP_NODShiLtJ_T0077130.1 MGP_NODShiLtJ_G0030529.1 mouse_genomes_project 6 54364307 54468904 + MGP_NODShiLtJ_P0077130 Stk31 protein_coding protein_coding MGP_NODShiLtJ_T0077131.1 MGP_NODShiLtJ_G0030529.1 mouse_genomes_project 6 54364338 54468755 + MGP_NODShiLtJ_P0077131 Stk31 protein_coding protein_coding MGP_NODShiLtJ_T0077132.1 MGP_NODShiLtJ_G0030529.1 mouse_genomes_project 6 54364338 54468755 + MGP_NODShiLtJ_P0077132 Stk31 protein_coding protein_coding MGP_NODShiLtJ_T0077133.1 MGP_NODShiLtJ_G0030529.1 mouse_genomes_project 6 54423303 54468903 + MGP_NODShiLtJ_P0077133 Stk31 protein_coding protein_coding MGP_NODShiLtJ_T0077060.1 MGP_NODShiLtJ_G0030512.1 mouse_genomes_project 6 53629243 53666693 + MGP_NODShiLtJ_P0077060 Gm28053 protein_coding protein_coding MGP_NODShiLtJ_T0077062.1 MGP_NODShiLtJ_G0030512.1 mouse_genomes_project 6 53629290 53640324 + Gm28053 protein_coding retained_intron MGP_NODShiLtJ_T0077066.1 MGP_NODShiLtJ_G0030512.1 mouse_genomes_project 6 53652149 53666737 + MGP_NODShiLtJ_P0077066 Gm28053 protein_coding protein_coding MGP_NODShiLtJ_T0011517.1 MGP_NODShiLtJ_G0009650.1 mouse_genomes_project 6 17101563 17101738 + Gm27365 misc_RNA misc_RNA MGP_NODShiLtJ_T0077124.1 MGP_NODShiLtJ_G0030528.1 mouse_genomes_project 6 54324011 54359271 + MGP_NODShiLtJ_P0077124 Fam221a protein_coding protein_coding MGP_NODShiLtJ_T0077125.1 MGP_NODShiLtJ_G0030528.1 mouse_genomes_project 6 54324168 54332246 + MGP_NODShiLtJ_P0077125 Fam221a protein_coding protein_coding MGP_NODShiLtJ_T0077126.1 MGP_NODShiLtJ_G0030528.1 mouse_genomes_project 6 54324181 54357617 + MGP_NODShiLtJ_P0077126 Fam221a protein_coding protein_coding MGP_NODShiLtJ_T0077127.1 MGP_NODShiLtJ_G0030528.1 mouse_genomes_project 6 54334881 54342351 + Fam221a protein_coding processed_transcript MGP_NODShiLtJ_T0077128.1 MGP_NODShiLtJ_G0030528.1 mouse_genomes_project 6 54342147 54358005 + Fam221a protein_coding retained_intron MGP_NODShiLtJ_T0077129.1 MGP_NODShiLtJ_G0030528.1 mouse_genomes_project 6 54356206 54357950 + Fam221a protein_coding retained_intron MGP_NODShiLtJ_T0080046.1 MGP_NODShiLtJ_G0031143.1 mouse_genomes_project 6 145111987 145160893 - MGP_NODShiLtJ_P0080046 BC035044 protein_coding protein_coding MGP_NODShiLtJ_T0015167.1 MGP_NODShiLtJ_G0013275.1 mouse_genomes_project 6 31925542 31925907 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100678.1 MGP_NODShiLtJ_G0039072.1 mouse_genomes_project 6 76080576 76080714 - Gm24911 snoRNA snoRNA MGP_NODShiLtJ_T0076299.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31613867 31627616 - Kcp protein_coding retained_intron MGP_NODShiLtJ_T0076300.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31625503 31652748 - MGP_NODShiLtJ_P0076300 Kcp protein_coding protein_coding MGP_NODShiLtJ_T0076301.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31625507 31628332 - MGP_NODShiLtJ_P0076301 Kcp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076302.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31625507 31652759 - MGP_NODShiLtJ_P0076302 Kcp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076303.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31625507 31640735 - MGP_NODShiLtJ_P0076303 Kcp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076304.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31627164 31628444 - Kcp protein_coding retained_intron MGP_NODShiLtJ_T0076305.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31641665 31643429 - Kcp protein_coding retained_intron MGP_NODShiLtJ_T0076306.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31642750 31647646 - MGP_NODShiLtJ_P0076306 Kcp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076307.1 MGP_NODShiLtJ_G0030334.1 mouse_genomes_project 6 31647111 31652774 - MGP_NODShiLtJ_P0076307 Kcp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005077.1 MGP_NODShiLtJ_G0004329.1 mouse_genomes_project 6 167208570 167211891 + Gm44020 antisense antisense MGP_NODShiLtJ_T0005030.1 MGP_NODShiLtJ_G0004289.1 mouse_genomes_project 6 142800534 142803338 + Gm42574 antisense antisense MGP_NODShiLtJ_T0004908.1 MGP_NODShiLtJ_G0004206.1 mouse_genomes_project 6 60056920 60058782 - antisense antisense MGP_NODShiLtJ_T0080508.1 MGP_NODShiLtJ_G0031278.1 mouse_genomes_project 6 160955241 160975491 - MGP_NODShiLtJ_P0080508 Ldhb protein_coding protein_coding MGP_NODShiLtJ_T0080509.1 MGP_NODShiLtJ_G0031278.1 mouse_genomes_project 6 160955332 160968861 - MGP_NODShiLtJ_P0080509 Ldhb protein_coding protein_coding MGP_NODShiLtJ_T0080510.1 MGP_NODShiLtJ_G0031278.1 mouse_genomes_project 6 160960688 160975286 - MGP_NODShiLtJ_P0080510 Ldhb protein_coding protein_coding MGP_NODShiLtJ_T0077192.1 MGP_NODShiLtJ_G0030541.1 mouse_genomes_project 6 57032975 57210110 - MGP_NODShiLtJ_P0077192 Skap2 protein_coding protein_coding MGP_NODShiLtJ_T0077193.1 MGP_NODShiLtJ_G0030541.1 mouse_genomes_project 6 57034658 57048294 - Skap2 protein_coding processed_transcript MGP_NODShiLtJ_T0077194.1 MGP_NODShiLtJ_G0030541.1 mouse_genomes_project 6 57034720 57210076 - MGP_NODShiLtJ_P0077194 Skap2 protein_coding protein_coding MGP_NODShiLtJ_T0077195.1 MGP_NODShiLtJ_G0030541.1 mouse_genomes_project 6 57035611 57090262 - MGP_NODShiLtJ_P0077195 Skap2 protein_coding protein_coding MGP_NODShiLtJ_T0077196.1 MGP_NODShiLtJ_G0030541.1 mouse_genomes_project 6 57046713 57050481 - Skap2 protein_coding retained_intron MGP_NODShiLtJ_T0077197.1 MGP_NODShiLtJ_G0030541.1 mouse_genomes_project 6 57052281 57116421 - Skap2 protein_coding processed_transcript MGP_NODShiLtJ_T0077198.1 MGP_NODShiLtJ_G0030541.1 mouse_genomes_project 6 57186094 57210093 - Skap2 protein_coding retained_intron MGP_NODShiLtJ_T0001900.1 MGP_NODShiLtJ_G0001812.1 mouse_genomes_project 6 32103085 32106686 - TEC TEC MGP_NODShiLtJ_T0100660.1 MGP_NODShiLtJ_G0039054.1 mouse_genomes_project 6 38686751 38686886 + Gm23273 snoRNA snoRNA MGP_NODShiLtJ_T0005067.1 MGP_NODShiLtJ_G0004320.1 mouse_genomes_project 6 163712579 163715453 + Gm26666 antisense antisense MGP_NODShiLtJ_T0015206.1 MGP_NODShiLtJ_G0013314.1 mouse_genomes_project 6 52398844 52399034 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100654.1 MGP_NODShiLtJ_G0039048.1 mouse_genomes_project 6 21312195 21312326 - Gm23960 snoRNA snoRNA MGP_NODShiLtJ_T0078135.1 MGP_NODShiLtJ_G0030769.1 mouse_genomes_project 6 97166299 97169593 - MGP_NODShiLtJ_P0078135 Nat8f2 protein_coding protein_coding MGP_NODShiLtJ_T0078489.1 MGP_NODShiLtJ_G0030841.1 mouse_genomes_project 6 101878733 101896534 - MGP_NODShiLtJ_P0078489 Chst13 protein_coding protein_coding MGP_NODShiLtJ_T0098434.1 MGP_NODShiLtJ_G0036835.1 mouse_genomes_project 6 111686009 111689902 - Gm20705 sense_intronic sense_intronic MGP_NODShiLtJ_T0100672.1 MGP_NODShiLtJ_G0039066.1 mouse_genomes_project 6 62123698 62123830 - Gm22493 snoRNA snoRNA MGP_NODShiLtJ_T0098440.1 MGP_NODShiLtJ_G0036841.1 mouse_genomes_project 6 152326096 152330104 - sense_intronic sense_intronic MGP_NODShiLtJ_T0001934.1 MGP_NODShiLtJ_G0001846.1 mouse_genomes_project 6 50713715 50718086 + TEC TEC MGP_NODShiLtJ_T0018100.1 MGP_NODShiLtJ_G0015494.1 mouse_genomes_project 6 53766236 53783848 - Gm44764 processed_transcript lincRNA MGP_NODShiLtJ_T0018101.1 MGP_NODShiLtJ_G0015494.1 mouse_genomes_project 6 53783035 53783855 - Gm44764 processed_transcript retained_intron MGP_NODShiLtJ_T0001908.1 MGP_NODShiLtJ_G0001820.1 mouse_genomes_project 6 37420539 37421772 + TEC TEC MGP_NODShiLtJ_T0010673.1 MGP_NODShiLtJ_G0008806.1 mouse_genomes_project 6 94096842 94096919 - Mir3470a miRNA miRNA MGP_NODShiLtJ_T0002688.1 MGP_NODShiLtJ_G0002561.1 mouse_genomes_project 6 44477846 44478331 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0080616.1 MGP_NODShiLtJ_G0031294.1 mouse_genomes_project 6 164476232 164555994 + MGP_NODShiLtJ_P0080616 Rassf8 protein_coding protein_coding MGP_NODShiLtJ_T0080617.1 MGP_NODShiLtJ_G0031294.1 mouse_genomes_project 6 164480047 164550106 + MGP_NODShiLtJ_P0080617 Rassf8 protein_coding protein_coding MGP_NODShiLtJ_T0080618.1 MGP_NODShiLtJ_G0031294.1 mouse_genomes_project 6 164542310 164552498 + MGP_NODShiLtJ_P0080618 Rassf8 protein_coding protein_coding MGP_NODShiLtJ_T0080619.1 MGP_NODShiLtJ_G0031294.1 mouse_genomes_project 6 164554858 164555989 + MGP_NODShiLtJ_P0080619 Rassf8 protein_coding protein_coding MGP_NODShiLtJ_T0077786.1 MGP_NODShiLtJ_G0030697.1 mouse_genomes_project 6 86847848 88092281 - MGP_NODShiLtJ_P0077786 Ctnna2 protein_coding protein_coding MGP_NODShiLtJ_T0077787.1 MGP_NODShiLtJ_G0030697.1 mouse_genomes_project 6 86847848 88092281 - MGP_NODShiLtJ_P0077787 Ctnna2 protein_coding protein_coding MGP_NODShiLtJ_T0077788.1 MGP_NODShiLtJ_G0030697.1 mouse_genomes_project 6 86847851 88092132 - MGP_NODShiLtJ_P0077788 Ctnna2 protein_coding protein_coding MGP_NODShiLtJ_T0077789.1 MGP_NODShiLtJ_G0030697.1 mouse_genomes_project 6 86848761 88092142 - MGP_NODShiLtJ_P0077789 Ctnna2 protein_coding protein_coding MGP_NODShiLtJ_T0077790.1 MGP_NODShiLtJ_G0030697.1 mouse_genomes_project 6 86848967 86882528 - Ctnna2 protein_coding retained_intron MGP_NODShiLtJ_T0077791.1 MGP_NODShiLtJ_G0030697.1 mouse_genomes_project 6 86912602 87170452 - MGP_NODShiLtJ_P0077791 Ctnna2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077796.1 MGP_NODShiLtJ_G0030697.1 mouse_genomes_project 6 87667496 88092142 - MGP_NODShiLtJ_P0077796 Ctnna2 protein_coding protein_coding MGP_NODShiLtJ_T0077797.1 MGP_NODShiLtJ_G0030697.1 mouse_genomes_project 6 88025972 88092167 - Ctnna2 protein_coding processed_transcript MGP_NODShiLtJ_T0001954.1 MGP_NODShiLtJ_G0001866.1 mouse_genomes_project 6 65049598 65051693 + TEC TEC MGP_NODShiLtJ_T0018145.1 MGP_NODShiLtJ_G0015509.1 mouse_genomes_project 6 122454529 122457027 + Gm17055 processed_transcript lincRNA MGP_NODShiLtJ_T0018146.1 MGP_NODShiLtJ_G0015509.1 mouse_genomes_project 6 122454657 122457147 + Gm17055 processed_transcript retained_intron MGP_NODShiLtJ_T0077760.1 MGP_NODShiLtJ_G0030691.1 mouse_genomes_project 6 81556913 81734627 - MGP_NODShiLtJ_P0077760 Tcf7l1 protein_coding protein_coding MGP_NODShiLtJ_T0077761.1 MGP_NODShiLtJ_G0030691.1 mouse_genomes_project 6 81557793 81734325 - MGP_NODShiLtJ_P0077761 Tcf7l1 protein_coding protein_coding MGP_NODShiLtJ_T0077762.1 MGP_NODShiLtJ_G0030691.1 mouse_genomes_project 6 81558112 81560706 - Tcf7l1 protein_coding processed_transcript MGP_NODShiLtJ_T0077763.1 MGP_NODShiLtJ_G0030691.1 mouse_genomes_project 6 81563422 81733971 - MGP_NODShiLtJ_P0077763 Tcf7l1 protein_coding protein_coding MGP_NODShiLtJ_T0077764.1 MGP_NODShiLtJ_G0030691.1 mouse_genomes_project 6 81582197 81606187 - Tcf7l1 protein_coding processed_transcript MGP_NODShiLtJ_T0015313.1 MGP_NODShiLtJ_G0013421.1 mouse_genomes_project 6 80776742 80777689 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079099.1 MGP_NODShiLtJ_G0030954.1 mouse_genomes_project 6 129806758 129817082 - MGP_NODShiLtJ_P0079099 Timp4 protein_coding protein_coding MGP_NODShiLtJ_T0079100.1 MGP_NODShiLtJ_G0030954.1 mouse_genomes_project 6 129811718 129816736 - MGP_NODShiLtJ_P0079100 Timp4 protein_coding protein_coding MGP_NODShiLtJ_T0004915.1 MGP_NODShiLtJ_G0004213.1 mouse_genomes_project 6 75293987 75294858 - antisense antisense MGP_NODShiLtJ_T0004965.1 MGP_NODShiLtJ_G0004242.1 mouse_genomes_project 6 99426991 99430289 + Gm5577 antisense antisense MGP_NODShiLtJ_T0004966.1 MGP_NODShiLtJ_G0004242.1 mouse_genomes_project 6 99427791 99450651 + Gm5577 antisense antisense MGP_NODShiLtJ_T0004967.1 MGP_NODShiLtJ_G0004242.1 mouse_genomes_project 6 99427791 99430281 + Gm5577 antisense antisense MGP_NODShiLtJ_T0099418.1 MGP_NODShiLtJ_G0037812.1 mouse_genomes_project 6 31218886 31219052 - Gm25589 snRNA snRNA MGP_NODShiLtJ_T0004906.1 MGP_NODShiLtJ_G0004204.1 mouse_genomes_project 6 59472348 59476393 - 9530036M11Rik antisense antisense MGP_NODShiLtJ_T0015514.1 MGP_NODShiLtJ_G0013622.1 mouse_genomes_project 6 152655963 152656869 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001979.1 MGP_NODShiLtJ_G0001891.1 mouse_genomes_project 6 87483021 87487869 - TEC TEC MGP_NODShiLtJ_T0075951.1 MGP_NODShiLtJ_G0030262.1 mouse_genomes_project 6 10000083 10007652 - MGP_NODShiLtJ_P0075951 Ndufa4 protein_coding protein_coding MGP_NODShiLtJ_T0075952.1 MGP_NODShiLtJ_G0030262.1 mouse_genomes_project 6 10000659 10007716 - Ndufa4 protein_coding retained_intron MGP_NODShiLtJ_T0076788.1 MGP_NODShiLtJ_G0030425.1 mouse_genomes_project 6 44200878 44209557 - MGP_NODShiLtJ_P0076788 Moxd2 protein_coding protein_coding MGP_NODShiLtJ_T0077397.1 MGP_NODShiLtJ_G0030593.1 mouse_genomes_project 6 62642319 62645062 + MGP_NODShiLtJ_P0077397 protein_coding protein_coding MGP_NODShiLtJ_T0079774.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140795865 140826036 + Zfp384 protein_coding retained_intron MGP_NODShiLtJ_T0079775.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140795899 140829380 + MGP_NODShiLtJ_P0079775 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079776.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140795947 140829380 + Zfp384 protein_coding retained_intron MGP_NODShiLtJ_T0079777.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140795958 140829608 + MGP_NODShiLtJ_P0079777 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079778.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140795997 140821766 + Zfp384 protein_coding processed_transcript MGP_NODShiLtJ_T0079779.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140796004 140829503 + MGP_NODShiLtJ_P0079779 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079780.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140796391 140829613 + MGP_NODShiLtJ_P0079780 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079781.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140796435 140811546 + Zfp384 protein_coding processed_transcript MGP_NODShiLtJ_T0079782.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140796437 140811692 + MGP_NODShiLtJ_P0079782 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079783.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140796457 140829380 + MGP_NODShiLtJ_P0079783 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079784.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140796458 140829380 + MGP_NODShiLtJ_P0079784 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079785.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140796467 140822649 + Zfp384 protein_coding retained_intron MGP_NODShiLtJ_T0079786.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140796527 140829380 + MGP_NODShiLtJ_P0079786 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079787.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140797114 140829380 + MGP_NODShiLtJ_P0079787 Zfp384 protein_coding protein_coding MGP_NODShiLtJ_T0079788.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140811565 140822645 + Zfp384 protein_coding retained_intron MGP_NODShiLtJ_T0079789.1 MGP_NODShiLtJ_G0031087.1 mouse_genomes_project 6 140820265 140829560 + Zfp384 protein_coding retained_intron MGP_NODShiLtJ_T0001905.1 MGP_NODShiLtJ_G0001817.1 mouse_genomes_project 6 35423987 35426983 - TEC TEC MGP_NODShiLtJ_T0008631.1 MGP_NODShiLtJ_G0006968.1 mouse_genomes_project 6 130115823 130129052 - lincRNA lincRNA MGP_NODShiLtJ_T0015434.1 MGP_NODShiLtJ_G0013542.1 mouse_genomes_project 6 131715031 131715440 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102047.1 MGP_NODShiLtJ_G0040214.1 mouse_genomes_project 6 150283466 150284868 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0079102.1 MGP_NODShiLtJ_G0030955.1 mouse_genomes_project 6 129932991 130022544 + MGP_NODShiLtJ_P0079102 Pparg protein_coding protein_coding MGP_NODShiLtJ_T0079103.1 MGP_NODShiLtJ_G0030955.1 mouse_genomes_project 6 129959302 130047129 + MGP_NODShiLtJ_P0079103 Pparg protein_coding protein_coding MGP_NODShiLtJ_T0079104.1 MGP_NODShiLtJ_G0030955.1 mouse_genomes_project 6 129986367 130075596 + MGP_NODShiLtJ_P0079104 Pparg protein_coding protein_coding MGP_NODShiLtJ_T0079105.1 MGP_NODShiLtJ_G0030955.1 mouse_genomes_project 6 130002406 130075592 + MGP_NODShiLtJ_P0079105 Pparg protein_coding protein_coding MGP_NODShiLtJ_T0079106.1 MGP_NODShiLtJ_G0030955.1 mouse_genomes_project 6 130020961 130047505 + Pparg protein_coding retained_intron MGP_NODShiLtJ_T0076795.1 MGP_NODShiLtJ_G0030430.1 mouse_genomes_project 6 44330151 44334853 - MGP_NODShiLtJ_P0076795 protein_coding protein_coding MGP_NODShiLtJ_T0008629.1 MGP_NODShiLtJ_G0006966.1 mouse_genomes_project 6 128126012 128127508 - 1700015O11Rik lincRNA lincRNA MGP_NODShiLtJ_T0002683.1 MGP_NODShiLtJ_G0002556.1 mouse_genomes_project 6 44422440 44422842 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0015503.1 MGP_NODShiLtJ_G0013611.1 mouse_genomes_project 6 149928532 149928905 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100662.1 MGP_NODShiLtJ_G0039056.1 mouse_genomes_project 6 42598513 42598644 - Gm25402 snoRNA snoRNA MGP_NODShiLtJ_T0005570.1 MGP_NODShiLtJ_G0004686.1 mouse_genomes_project 6 129672547 129683321 - Gm17733 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0015213.1 MGP_NODShiLtJ_G0013321.1 mouse_genomes_project 6 53734764 53736202 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101366.1 MGP_NODShiLtJ_G0039588.1 mouse_genomes_project 6 137253833 137473574 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0015493.1 MGP_NODShiLtJ_G0013601.1 mouse_genomes_project 6 147948656 147951196 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000217.1 MGP_NODShiLtJ_G0000157.1 mouse_genomes_project 6 79401659 79402248 + MGP_NODShiLtJ_P0000217 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0015211.1 MGP_NODShiLtJ_G0013319.1 mouse_genomes_project 6 53268314 53269185 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100717.1 MGP_NODShiLtJ_G0039111.1 mouse_genomes_project 6 140993210 140993535 - Scarna10 snoRNA snoRNA MGP_NODShiLtJ_T0078005.1 MGP_NODShiLtJ_G0030743.1 mouse_genomes_project 6 94695885 94707490 - MGP_NODShiLtJ_P0078005 Clec4f protein_coding protein_coding MGP_NODShiLtJ_T0078006.1 MGP_NODShiLtJ_G0030743.1 mouse_genomes_project 6 94696560 94707424 - Clec4f protein_coding processed_transcript MGP_NODShiLtJ_T0001907.1 MGP_NODShiLtJ_G0001819.1 mouse_genomes_project 6 36156087 36158215 - TEC TEC MGP_NODShiLtJ_T0015354.1 MGP_NODShiLtJ_G0013462.1 mouse_genomes_project 6 97231258 97232035 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079284.1 MGP_NODShiLtJ_G0030990.1 mouse_genomes_project 6 133240802 133283725 - MGP_NODShiLtJ_P0079284 Bms1 protein_coding protein_coding MGP_NODShiLtJ_T0079285.1 MGP_NODShiLtJ_G0030990.1 mouse_genomes_project 6 133255038 133283655 - Bms1 protein_coding retained_intron MGP_NODShiLtJ_T0079286.1 MGP_NODShiLtJ_G0030990.1 mouse_genomes_project 6 133278084 133283663 - Bms1 protein_coding processed_transcript MGP_NODShiLtJ_T0079129.1 MGP_NODShiLtJ_G0030961.1 mouse_genomes_project 6 130335315 130367677 - MGP_NODShiLtJ_P0079129 Tmem40 protein_coding protein_coding MGP_NODShiLtJ_T0079130.1 MGP_NODShiLtJ_G0030961.1 mouse_genomes_project 6 130335322 130379676 - MGP_NODShiLtJ_P0079130 Tmem40 protein_coding protein_coding MGP_NODShiLtJ_T0079131.1 MGP_NODShiLtJ_G0030961.1 mouse_genomes_project 6 130335322 130373230 - MGP_NODShiLtJ_P0079131 Tmem40 protein_coding protein_coding MGP_NODShiLtJ_T0079132.1 MGP_NODShiLtJ_G0030961.1 mouse_genomes_project 6 130335327 130341087 - Tmem40 protein_coding processed_transcript MGP_NODShiLtJ_T0079133.1 MGP_NODShiLtJ_G0030961.1 mouse_genomes_project 6 130335717 130341429 - Tmem40 protein_coding retained_intron MGP_NODShiLtJ_T0100723.1 MGP_NODShiLtJ_G0039117.1 mouse_genomes_project 6 163471497 163471630 - Gm22792 snoRNA snoRNA MGP_NODShiLtJ_T0097821.1 MGP_NODShiLtJ_G0036233.1 mouse_genomes_project 6 77193405 77193687 - pseudogene pseudogene MGP_NODShiLtJ_T0098072.1 MGP_NODShiLtJ_G0036484.1 mouse_genomes_project 6 158553230 158553334 + n-R5s168 rRNA rRNA MGP_NODShiLtJ_T0077246.1 MGP_NODShiLtJ_G0030558.1 mouse_genomes_project 6 58040082 58184605 - Jazf1 protein_coding processed_transcript MGP_NODShiLtJ_T0077247.1 MGP_NODShiLtJ_G0030558.1 mouse_genomes_project 6 58040082 58049595 - Jazf1 protein_coding processed_transcript MGP_NODShiLtJ_T0077248.1 MGP_NODShiLtJ_G0030558.1 mouse_genomes_project 6 58040082 58346466 - MGP_NODShiLtJ_P0077248 Jazf1 protein_coding protein_coding MGP_NODShiLtJ_T0076526.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37131681 37322680 + MGP_NODShiLtJ_P0076526 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076527.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37131693 37300817 + MGP_NODShiLtJ_P0076527 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076528.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37131725 37231701 + Cald1 protein_coding retained_intron MGP_NODShiLtJ_T0076529.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37131725 37288596 + Cald1 protein_coding retained_intron MGP_NODShiLtJ_T0076530.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37131745 37322692 + MGP_NODShiLtJ_P0076530 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076531.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37131746 37322692 + MGP_NODShiLtJ_P0076531 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076532.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37131801 37201727 + Cald1 protein_coding retained_intron MGP_NODShiLtJ_T0076533.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37255927 37322699 + MGP_NODShiLtJ_P0076533 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076534.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37255975 37257239 + Cald1 protein_coding retained_intron MGP_NODShiLtJ_T0076535.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37255975 37322694 + MGP_NODShiLtJ_P0076535 Cald1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076536.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37256119 37320920 + MGP_NODShiLtJ_P0076536 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076537.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37293183 37303126 + MGP_NODShiLtJ_P0076537 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076538.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37293212 37303036 + MGP_NODShiLtJ_P0076538 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076539.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37293238 37303036 + MGP_NODShiLtJ_P0076539 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076540.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37293617 37309349 + MGP_NODShiLtJ_P0076540 Cald1 protein_coding protein_coding MGP_NODShiLtJ_T0076541.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37295004 37300736 + Cald1 protein_coding retained_intron MGP_NODShiLtJ_T0076542.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37310084 37314056 + Cald1 protein_coding retained_intron MGP_NODShiLtJ_T0076543.1 MGP_NODShiLtJ_G0030369.1 mouse_genomes_project 6 37312180 37313863 + Cald1 protein_coding retained_intron MGP_NODShiLtJ_T0098210.1 MGP_NODShiLtJ_G0036622.1 mouse_genomes_project 6 157291626 157291793 - Gm25434 scaRNA scaRNA MGP_NODShiLtJ_T0076247.1 MGP_NODShiLtJ_G0030323.1 mouse_genomes_project 6 31278158 31289521 - MGP_NODShiLtJ_P0076247 Prrt4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078999.1 MGP_NODShiLtJ_G0030937.1 mouse_genomes_project 6 128019255 128090039 + MGP_NODShiLtJ_P0078999 Fancd2 protein_coding protein_coding MGP_NODShiLtJ_T0079000.1 MGP_NODShiLtJ_G0030937.1 mouse_genomes_project 6 128019277 128025407 + Fancd2 protein_coding retained_intron MGP_NODShiLtJ_T0079001.1 MGP_NODShiLtJ_G0030937.1 mouse_genomes_project 6 128019277 128026290 + Fancd2 protein_coding retained_intron MGP_NODShiLtJ_T0079002.1 MGP_NODShiLtJ_G0030937.1 mouse_genomes_project 6 128019277 128089295 + MGP_NODShiLtJ_P0079002 Fancd2 protein_coding protein_coding MGP_NODShiLtJ_T0079003.1 MGP_NODShiLtJ_G0030937.1 mouse_genomes_project 6 128040889 128043056 + Fancd2 protein_coding retained_intron MGP_NODShiLtJ_T0079004.1 MGP_NODShiLtJ_G0030937.1 mouse_genomes_project 6 128040893 128051479 + MGP_NODShiLtJ_P0079004 Fancd2 protein_coding protein_coding MGP_NODShiLtJ_T0079005.1 MGP_NODShiLtJ_G0030937.1 mouse_genomes_project 6 128057702 128063969 + MGP_NODShiLtJ_P0079005 Fancd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079006.1 MGP_NODShiLtJ_G0030937.1 mouse_genomes_project 6 128076083 128078650 + Fancd2 protein_coding retained_intron MGP_NODShiLtJ_T0001918.1 MGP_NODShiLtJ_G0001830.1 mouse_genomes_project 6 49209805 49215294 + TEC TEC MGP_NODShiLtJ_T0079279.1 MGP_NODShiLtJ_G0030988.1 mouse_genomes_project 6 132949680 132973177 - Csgalnact2 protein_coding retained_intron MGP_NODShiLtJ_T0079280.1 MGP_NODShiLtJ_G0030988.1 mouse_genomes_project 6 132949680 132984559 - MGP_NODShiLtJ_P0079280 Csgalnact2 protein_coding protein_coding MGP_NODShiLtJ_T0079281.1 MGP_NODShiLtJ_G0030988.1 mouse_genomes_project 6 132952890 132969963 - MGP_NODShiLtJ_P0079281 Csgalnact2 protein_coding protein_coding MGP_NODShiLtJ_T0080700.1 MGP_NODShiLtJ_G0031310.1 mouse_genomes_project 6 165857461 165881377 + MGP_NODShiLtJ_P0080700 Klhl42 protein_coding protein_coding MGP_NODShiLtJ_T0080701.1 MGP_NODShiLtJ_G0031310.1 mouse_genomes_project 6 165872133 165876774 + Klhl42 protein_coding processed_transcript MGP_NODShiLtJ_T0080702.1 MGP_NODShiLtJ_G0031310.1 mouse_genomes_project 6 165876694 165879202 + MGP_NODShiLtJ_P0080702 Klhl42 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010703.1 MGP_NODShiLtJ_G0008836.1 mouse_genomes_project 6 140491623 140491692 - Mir200c miRNA miRNA MGP_NODShiLtJ_T0002067.1 MGP_NODShiLtJ_G0001979.1 mouse_genomes_project 6 116504513 116506987 + TEC TEC MGP_NODShiLtJ_T0080743.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167743756 167744919 - Caprin2 protein_coding retained_intron MGP_NODShiLtJ_T0080744.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167743756 167804727 - MGP_NODShiLtJ_P0080744 Caprin2 protein_coding protein_coding MGP_NODShiLtJ_T0080745.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167743757 167753527 - MGP_NODShiLtJ_P0080745 Caprin2 protein_coding protein_coding MGP_NODShiLtJ_T0080746.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167743757 167804640 - MGP_NODShiLtJ_P0080746 Caprin2 protein_coding protein_coding MGP_NODShiLtJ_T0080747.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167745303 167751315 - Caprin2 protein_coding retained_intron MGP_NODShiLtJ_T0080748.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167745831 167753498 - Caprin2 protein_coding processed_transcript MGP_NODShiLtJ_T0080749.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167749740 167766706 - Caprin2 protein_coding processed_transcript MGP_NODShiLtJ_T0080750.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167785135 167803949 - MGP_NODShiLtJ_P0080750 Caprin2 protein_coding protein_coding MGP_NODShiLtJ_T0080751.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167791769 167798053 - Caprin2 protein_coding retained_intron MGP_NODShiLtJ_T0080752.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167794903 167804652 - Caprin2 protein_coding processed_transcript MGP_NODShiLtJ_T0080753.1 MGP_NODShiLtJ_G0031317.1 mouse_genomes_project 6 167802659 167804099 - Caprin2 protein_coding processed_transcript MGP_NODShiLtJ_T0100695.1 MGP_NODShiLtJ_G0039089.1 mouse_genomes_project 6 109285188 109285319 - Gm26175 snoRNA snoRNA MGP_NODShiLtJ_T0015303.1 MGP_NODShiLtJ_G0013411.1 mouse_genomes_project 6 76053977 76055056 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008482.1 MGP_NODShiLtJ_G0006856.1 mouse_genomes_project 6 36689898 36697052 + Gm13855 lincRNA lincRNA MGP_NODShiLtJ_T0100704.1 MGP_NODShiLtJ_G0039098.1 mouse_genomes_project 6 132955469 132955601 - Gm23908 snoRNA snoRNA MGP_NODShiLtJ_T0008518.1 MGP_NODShiLtJ_G0006878.1 mouse_genomes_project 6 56408971 56413001 - Gm44447 lincRNA lincRNA MGP_NODShiLtJ_T0008582.1 MGP_NODShiLtJ_G0006930.1 mouse_genomes_project 6 98096202 98099804 + Gm44036 lincRNA lincRNA MGP_NODShiLtJ_T0080190.1 MGP_NODShiLtJ_G0031213.1 mouse_genomes_project 6 151422084 151665646 + MGP_NODShiLtJ_P0080190 Etv6 protein_coding protein_coding MGP_NODShiLtJ_T0080191.1 MGP_NODShiLtJ_G0031213.1 mouse_genomes_project 6 151422352 151643850 + MGP_NODShiLtJ_P0080191 Etv6 protein_coding protein_coding MGP_NODShiLtJ_T0080192.1 MGP_NODShiLtJ_G0031213.1 mouse_genomes_project 6 151528384 151665653 + MGP_NODShiLtJ_P0080192 Etv6 protein_coding protein_coding MGP_NODShiLtJ_T0080193.1 MGP_NODShiLtJ_G0031213.1 mouse_genomes_project 6 151629149 151657509 + Etv6 protein_coding retained_intron MGP_NODShiLtJ_T0080194.1 MGP_NODShiLtJ_G0031213.1 mouse_genomes_project 6 151643130 151644123 + Etv6 protein_coding processed_transcript MGP_NODShiLtJ_T0076717.1 MGP_NODShiLtJ_G0030405.1 mouse_genomes_project 6 42564337 42596508 - MGP_NODShiLtJ_P0076717 Mkrn1 protein_coding protein_coding MGP_NODShiLtJ_T0076718.1 MGP_NODShiLtJ_G0030405.1 mouse_genomes_project 6 42565675 42572680 - MGP_NODShiLtJ_P0076718 Mkrn1 protein_coding protein_coding MGP_NODShiLtJ_T0076719.1 MGP_NODShiLtJ_G0030405.1 mouse_genomes_project 6 42567286 42596292 - MGP_NODShiLtJ_P0076719 Mkrn1 protein_coding protein_coding MGP_NODShiLtJ_T0076720.1 MGP_NODShiLtJ_G0030405.1 mouse_genomes_project 6 42567292 42596583 - MGP_NODShiLtJ_P0076720 Mkrn1 protein_coding protein_coding MGP_NODShiLtJ_T0076721.1 MGP_NODShiLtJ_G0030405.1 mouse_genomes_project 6 42567807 42573031 - Mkrn1 protein_coding retained_intron MGP_NODShiLtJ_T0076722.1 MGP_NODShiLtJ_G0030405.1 mouse_genomes_project 6 42572760 42595982 - MGP_NODShiLtJ_P0076722 Mkrn1 protein_coding protein_coding MGP_NODShiLtJ_T0076723.1 MGP_NODShiLtJ_G0030405.1 mouse_genomes_project 6 42573488 42596523 - MGP_NODShiLtJ_P0076723 Mkrn1 protein_coding protein_coding MGP_NODShiLtJ_T0015362.1 MGP_NODShiLtJ_G0013470.1 mouse_genomes_project 6 103838263 103840081 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001893.1 MGP_NODShiLtJ_G0001805.1 mouse_genomes_project 6 30227222 30231305 - TEC TEC MGP_NODShiLtJ_T0080623.1 MGP_NODShiLtJ_G0031296.1 mouse_genomes_project 6 164673950 164707876 + MGP_NODShiLtJ_P0080623 Sspn protein_coding protein_coding MGP_NODShiLtJ_T0080624.1 MGP_NODShiLtJ_G0031296.1 mouse_genomes_project 6 164676159 164707876 + MGP_NODShiLtJ_P0080624 Sspn protein_coding protein_coding MGP_NODShiLtJ_T0080625.1 MGP_NODShiLtJ_G0031296.1 mouse_genomes_project 6 164696131 164707876 + MGP_NODShiLtJ_P0080625 Sspn protein_coding protein_coding MGP_NODShiLtJ_T0079186.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130845276 130904137 + MGP_NODShiLtJ_P0079186 Fam21 protein_coding protein_coding MGP_NODShiLtJ_T0079187.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130845284 130896391 + MGP_NODShiLtJ_P0079187 Fam21 protein_coding protein_coding MGP_NODShiLtJ_T0079188.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130845294 130857786 + MGP_NODShiLtJ_P0079188 Fam21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079189.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130845333 130846561 + Fam21 protein_coding retained_intron MGP_NODShiLtJ_T0079190.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130845360 130851207 + MGP_NODShiLtJ_P0079190 Fam21 protein_coding protein_coding MGP_NODShiLtJ_T0079191.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130845375 130853387 + MGP_NODShiLtJ_P0079191 Fam21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079192.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130845444 130904116 + Fam21 protein_coding retained_intron MGP_NODShiLtJ_T0079193.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130845754 130900302 + MGP_NODShiLtJ_P0079193 Fam21 protein_coding protein_coding MGP_NODShiLtJ_T0079194.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130857790 130862190 + Fam21 protein_coding retained_intron MGP_NODShiLtJ_T0079195.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130859117 130866622 + MGP_NODShiLtJ_P0079195 Fam21 protein_coding protein_coding MGP_NODShiLtJ_T0079196.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130863220 130869014 + Fam21 protein_coding retained_intron MGP_NODShiLtJ_T0079197.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130897124 130898147 + Fam21 protein_coding retained_intron MGP_NODShiLtJ_T0079198.1 MGP_NODShiLtJ_G0030971.1 mouse_genomes_project 6 130897874 130900287 + Fam21 protein_coding retained_intron MGP_NODShiLtJ_T0008509.1 MGP_NODShiLtJ_G0006872.1 mouse_genomes_project 6 53715360 53715907 - Gm44019 lincRNA lincRNA MGP_NODShiLtJ_T0002077.1 MGP_NODShiLtJ_G0001989.1 mouse_genomes_project 6 128176033 128178521 - TEC TEC MGP_NODShiLtJ_T0078564.1 MGP_NODShiLtJ_G0030855.1 mouse_genomes_project 6 103113708 103140292 - MGP_NODShiLtJ_P0078564 Xpc protein_coding protein_coding MGP_NODShiLtJ_T0078565.1 MGP_NODShiLtJ_G0030855.1 mouse_genomes_project 6 103116676 103140199 - MGP_NODShiLtJ_P0078565 Xpc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078566.1 MGP_NODShiLtJ_G0030855.1 mouse_genomes_project 6 103131319 103140288 - MGP_NODShiLtJ_P0078566 Xpc protein_coding protein_coding MGP_NODShiLtJ_T0080711.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167010088 167045406 - MGP_NODShiLtJ_P0080711 Ergic2 protein_coding protein_coding MGP_NODShiLtJ_T0080712.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167013008 167045139 - MGP_NODShiLtJ_P0080712 Ergic2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080713.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167013102 167019899 - MGP_NODShiLtJ_P0080713 Ergic2 protein_coding protein_coding MGP_NODShiLtJ_T0080714.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167013157 167015001 - MGP_NODShiLtJ_P0080714 Ergic2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080715.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167013437 167027060 - MGP_NODShiLtJ_P0080715 Ergic2 protein_coding protein_coding MGP_NODShiLtJ_T0080716.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167013720 167028045 - Ergic2 protein_coding retained_intron MGP_NODShiLtJ_T0080717.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167014838 167021513 - Ergic2 protein_coding retained_intron MGP_NODShiLtJ_T0080718.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167015490 167045406 - Ergic2 protein_coding processed_transcript MGP_NODShiLtJ_T0080719.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167019843 167028330 - Ergic2 protein_coding retained_intron MGP_NODShiLtJ_T0080720.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167021306 167027043 - Ergic2 protein_coding processed_transcript MGP_NODShiLtJ_T0080721.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167021352 167045054 - MGP_NODShiLtJ_P0080721 Ergic2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080722.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167022725 167028147 - Ergic2 protein_coding processed_transcript MGP_NODShiLtJ_T0080723.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167026997 167035820 - Ergic2 protein_coding retained_intron MGP_NODShiLtJ_T0080724.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167031987 167045009 - Ergic2 protein_coding retained_intron MGP_NODShiLtJ_T0080725.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167034522 167045054 - MGP_NODShiLtJ_P0080725 Ergic2 protein_coding protein_coding MGP_NODShiLtJ_T0080726.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167035277 167045053 - Ergic2 protein_coding retained_intron MGP_NODShiLtJ_T0080727.1 MGP_NODShiLtJ_G0031314.1 mouse_genomes_project 6 167035730 167045037 - Ergic2 protein_coding processed_transcript MGP_NODShiLtJ_T0008458.1 MGP_NODShiLtJ_G0006839.1 mouse_genomes_project 6 33183890 33230357 + 4930412F09Rik lincRNA lincRNA MGP_NODShiLtJ_T0102024.1 MGP_NODShiLtJ_G0040192.1 mouse_genomes_project 6 137149529 137187517 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101999.1 MGP_NODShiLtJ_G0040167.1 mouse_genomes_project 6 63851134 63852047 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002046.1 MGP_NODShiLtJ_G0001958.1 mouse_genomes_project 6 104952202 104958256 + TEC TEC MGP_NODShiLtJ_T0005001.1 MGP_NODShiLtJ_G0004264.1 mouse_genomes_project 6 127523027 127532766 - antisense antisense MGP_NODShiLtJ_T0005002.1 MGP_NODShiLtJ_G0004264.1 mouse_genomes_project 6 127523258 127532752 - antisense antisense MGP_NODShiLtJ_T0005003.1 MGP_NODShiLtJ_G0004264.1 mouse_genomes_project 6 127525994 127532785 - antisense antisense MGP_NODShiLtJ_T0005004.1 MGP_NODShiLtJ_G0004264.1 mouse_genomes_project 6 127526370 127532908 - antisense antisense MGP_NODShiLtJ_T0079819.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140948119 140965232 + Iffo1 protein_coding retained_intron MGP_NODShiLtJ_T0079820.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140948119 140965232 + MGP_NODShiLtJ_P0079820 Iffo1 protein_coding protein_coding MGP_NODShiLtJ_T0079821.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140948119 140965232 + MGP_NODShiLtJ_P0079821 Iffo1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079822.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140948129 140965226 + MGP_NODShiLtJ_P0079822 Iffo1 protein_coding protein_coding MGP_NODShiLtJ_T0079823.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140948144 140965226 + Iffo1 protein_coding retained_intron MGP_NODShiLtJ_T0079824.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140948679 140965226 + MGP_NODShiLtJ_P0079824 Iffo1 protein_coding protein_coding MGP_NODShiLtJ_T0079825.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140948904 140965226 + Iffo1 protein_coding retained_intron MGP_NODShiLtJ_T0079826.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140951888 140954384 + Iffo1 protein_coding processed_transcript MGP_NODShiLtJ_T0079827.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140952409 140955627 + Iffo1 protein_coding retained_intron MGP_NODShiLtJ_T0079828.1 MGP_NODShiLtJ_G0031093.1 mouse_genomes_project 6 140956244 140964507 + Iffo1 protein_coding retained_intron MGP_NODShiLtJ_T0080319.1 MGP_NODShiLtJ_G0031242.1 mouse_genomes_project 6 154536455 154539874 - MGP_NODShiLtJ_P0080319 Mgp protein_coding protein_coding MGP_NODShiLtJ_T0080320.1 MGP_NODShiLtJ_G0031242.1 mouse_genomes_project 6 154537740 154539832 - Mgp protein_coding retained_intron MGP_NODShiLtJ_T0004979.1 MGP_NODShiLtJ_G0004252.1 mouse_genomes_project 6 103676330 103680054 - 4930466I24Rik antisense antisense MGP_NODShiLtJ_T0008678.1 MGP_NODShiLtJ_G0007004.1 mouse_genomes_project 6 153180707 153203908 + 4930425L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0008679.1 MGP_NODShiLtJ_G0007004.1 mouse_genomes_project 6 153199568 153205040 + 4930425L21Rik lincRNA lincRNA MGP_NODShiLtJ_T0008442.1 MGP_NODShiLtJ_G0006828.1 mouse_genomes_project 6 16405437 16411628 - Gm15473 lincRNA lincRNA MGP_NODShiLtJ_T0077696.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81261733 81264149 - Rnf181 protein_coding retained_intron MGP_NODShiLtJ_T0077697.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81261733 81264419 - MGP_NODShiLtJ_P0077697 Rnf181 protein_coding protein_coding MGP_NODShiLtJ_T0077698.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81261733 81264458 - MGP_NODShiLtJ_P0077698 Rnf181 protein_coding protein_coding MGP_NODShiLtJ_T0077699.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81261891 81264386 - MGP_NODShiLtJ_P0077699 Rnf181 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077700.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262103 81263436 - MGP_NODShiLtJ_P0077700 Rnf181 protein_coding protein_coding MGP_NODShiLtJ_T0077701.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262264 81268950 - MGP_NODShiLtJ_P0077701 Rnf181 protein_coding protein_coding MGP_NODShiLtJ_T0077702.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262270 81264370 - MGP_NODShiLtJ_P0077702 Rnf181 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077703.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262296 81264416 - MGP_NODShiLtJ_P0077703 Rnf181 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077704.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262297 81264389 - MGP_NODShiLtJ_P0077704 Rnf181 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077705.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262307 81264408 - MGP_NODShiLtJ_P0077705 Rnf181 protein_coding protein_coding MGP_NODShiLtJ_T0077706.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262355 81264391 - MGP_NODShiLtJ_P0077706 Rnf181 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077707.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262437 81263106 - Rnf181 protein_coding retained_intron MGP_NODShiLtJ_T0077708.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81262634 81264454 - Rnf181 protein_coding retained_intron MGP_NODShiLtJ_T0077709.1 MGP_NODShiLtJ_G0030681.1 mouse_genomes_project 6 81263035 81264021 - Rnf181 protein_coding retained_intron MGP_NODShiLtJ_T0010700.1 MGP_NODShiLtJ_G0008833.1 mouse_genomes_project 6 136448462 136448541 - Gm24855 miRNA miRNA MGP_NODShiLtJ_T0079448.1 MGP_NODShiLtJ_G0031015.1 mouse_genomes_project 6 135929704 135968989 + Bcl2l13 protein_coding retained_intron MGP_NODShiLtJ_T0079449.1 MGP_NODShiLtJ_G0031015.1 mouse_genomes_project 6 135929704 135966737 + MGP_NODShiLtJ_P0079449 Bcl2l13 protein_coding protein_coding MGP_NODShiLtJ_T0079450.1 MGP_NODShiLtJ_G0031015.1 mouse_genomes_project 6 135929718 135976963 + MGP_NODShiLtJ_P0079450 Bcl2l13 protein_coding protein_coding MGP_NODShiLtJ_T0079451.1 MGP_NODShiLtJ_G0031015.1 mouse_genomes_project 6 135929730 135995186 + MGP_NODShiLtJ_P0079451 Bcl2l13 protein_coding protein_coding MGP_NODShiLtJ_T0002682.1 MGP_NODShiLtJ_G0002555.1 mouse_genomes_project 6 44407859 44408135 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0015389.1 MGP_NODShiLtJ_G0013497.1 mouse_genomes_project 6 113624896 113625136 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078539.1 MGP_NODShiLtJ_G0030850.1 mouse_genomes_project 6 102765891 102783901 + MGP_NODShiLtJ_P0078539 Hdac11 protein_coding protein_coding MGP_NODShiLtJ_T0078540.1 MGP_NODShiLtJ_G0030850.1 mouse_genomes_project 6 102765959 102768849 + Hdac11 protein_coding retained_intron MGP_NODShiLtJ_T0078541.1 MGP_NODShiLtJ_G0030850.1 mouse_genomes_project 6 102765967 102775739 + MGP_NODShiLtJ_P0078541 Hdac11 protein_coding protein_coding MGP_NODShiLtJ_T0078542.1 MGP_NODShiLtJ_G0030850.1 mouse_genomes_project 6 102766305 102777065 + Hdac11 protein_coding retained_intron MGP_NODShiLtJ_T0078543.1 MGP_NODShiLtJ_G0030850.1 mouse_genomes_project 6 102774867 102778676 + MGP_NODShiLtJ_P0078543 Hdac11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078544.1 MGP_NODShiLtJ_G0030850.1 mouse_genomes_project 6 102780980 102782500 + Hdac11 protein_coding retained_intron MGP_NODShiLtJ_T0080799.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168389412 168400607 + Bicd1 protein_coding retained_intron MGP_NODShiLtJ_T0080800.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168389510 168603741 + MGP_NODShiLtJ_P0080800 Bicd1 protein_coding protein_coding MGP_NODShiLtJ_T0080801.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168389542 168593560 + MGP_NODShiLtJ_P0080801 Bicd1 protein_coding protein_coding MGP_NODShiLtJ_T0080802.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168389595 168495673 + Bicd1 protein_coding retained_intron MGP_NODShiLtJ_T0080803.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168389955 168592565 + MGP_NODShiLtJ_P0080803 Bicd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080804.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168389955 168592565 + MGP_NODShiLtJ_P0080804 Bicd1 protein_coding protein_coding MGP_NODShiLtJ_T0080805.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168520899 168526414 + Bicd1 protein_coding retained_intron MGP_NODShiLtJ_T0080806.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168523999 168530630 + MGP_NODShiLtJ_P0080806 Bicd1 protein_coding protein_coding MGP_NODShiLtJ_T0080807.1 MGP_NODShiLtJ_G0031323.1 mouse_genomes_project 6 168566355 168594598 + Bicd1 protein_coding retained_intron MGP_NODShiLtJ_T0079740.1 MGP_NODShiLtJ_G0031081.1 mouse_genomes_project 6 140646583 140670114 - MGP_NODShiLtJ_P0079740 Cd4 protein_coding protein_coding MGP_NODShiLtJ_T0079741.1 MGP_NODShiLtJ_G0031081.1 mouse_genomes_project 6 140648517 140652166 - Cd4 protein_coding processed_transcript MGP_NODShiLtJ_T0079742.1 MGP_NODShiLtJ_G0031081.1 mouse_genomes_project 6 140648617 140652383 - Cd4 protein_coding processed_transcript MGP_NODShiLtJ_T0079743.1 MGP_NODShiLtJ_G0031081.1 mouse_genomes_project 6 140649222 140670092 - Cd4 protein_coding retained_intron MGP_NODShiLtJ_T0079744.1 MGP_NODShiLtJ_G0031081.1 mouse_genomes_project 6 140660633 140670093 - Cd4 protein_coding retained_intron MGP_NODShiLtJ_T0078996.1 MGP_NODShiLtJ_G0030936.1 mouse_genomes_project 6 128002422 128019226 - MGP_NODShiLtJ_P0078996 Emc3 protein_coding protein_coding MGP_NODShiLtJ_T0078997.1 MGP_NODShiLtJ_G0030936.1 mouse_genomes_project 6 128007342 128008460 - Emc3 protein_coding retained_intron MGP_NODShiLtJ_T0078998.1 MGP_NODShiLtJ_G0030936.1 mouse_genomes_project 6 128017976 128019192 - Emc3 protein_coding retained_intron MGP_NODShiLtJ_T0002099.1 MGP_NODShiLtJ_G0002011.1 mouse_genomes_project 6 143818965 143821243 - TEC TEC MGP_NODShiLtJ_T0002016.1 MGP_NODShiLtJ_G0001928.1 mouse_genomes_project 6 98941744 98944380 + TEC TEC MGP_NODShiLtJ_T0015456.1 MGP_NODShiLtJ_G0013564.1 mouse_genomes_project 6 138224901 138225643 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078141.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97201386 97205920 + Tprkb protein_coding processed_transcript MGP_NODShiLtJ_T0078142.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97201398 97218927 + MGP_NODShiLtJ_P0078142 Tprkb protein_coding protein_coding MGP_NODShiLtJ_T0078143.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97201412 97206306 + Tprkb protein_coding processed_transcript MGP_NODShiLtJ_T0078144.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97201428 97214371 + Tprkb protein_coding processed_transcript MGP_NODShiLtJ_T0078145.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97204776 97206740 + Tprkb protein_coding retained_intron MGP_NODShiLtJ_T0078146.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97206413 97217602 + MGP_NODShiLtJ_P0078146 Tprkb protein_coding protein_coding MGP_NODShiLtJ_T0078147.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97206432 97221493 + MGP_NODShiLtJ_P0078147 Tprkb protein_coding protein_coding MGP_NODShiLtJ_T0078148.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97206432 97218089 + MGP_NODShiLtJ_P0078148 Tprkb protein_coding protein_coding MGP_NODShiLtJ_T0078149.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97206441 97221491 + MGP_NODShiLtJ_P0078149 Tprkb protein_coding protein_coding MGP_NODShiLtJ_T0078150.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97206441 97218514 + MGP_NODShiLtJ_P0078150 Tprkb protein_coding protein_coding MGP_NODShiLtJ_T0078151.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97206450 97214610 + Tprkb protein_coding processed_transcript MGP_NODShiLtJ_T0078152.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97206451 97217885 + MGP_NODShiLtJ_P0078152 Tprkb protein_coding protein_coding MGP_NODShiLtJ_T0078153.1 MGP_NODShiLtJ_G0030772.1 mouse_genomes_project 6 97206492 97217934 + MGP_NODShiLtJ_P0078153 Tprkb protein_coding protein_coding MGP_NODShiLtJ_T0015320.1 MGP_NODShiLtJ_G0013428.1 mouse_genomes_project 6 84614537 84615519 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079528.1 MGP_NODShiLtJ_G0031030.1 mouse_genomes_project 6 137824350 137845321 - MGP_NODShiLtJ_P0079528 Rimklb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079529.1 MGP_NODShiLtJ_G0031030.1 mouse_genomes_project 6 137824352 137829785 - Rimklb protein_coding processed_transcript MGP_NODShiLtJ_T0079530.1 MGP_NODShiLtJ_G0031030.1 mouse_genomes_project 6 137830153 137866417 - MGP_NODShiLtJ_P0079530 Rimklb protein_coding protein_coding MGP_NODShiLtJ_T0079531.1 MGP_NODShiLtJ_G0031030.1 mouse_genomes_project 6 137831312 137845269 - MGP_NODShiLtJ_P0079531 Rimklb protein_coding protein_coding MGP_NODShiLtJ_T0079532.1 MGP_NODShiLtJ_G0031030.1 mouse_genomes_project 6 137836891 137851291 - Rimklb protein_coding processed_transcript MGP_NODShiLtJ_T0079533.1 MGP_NODShiLtJ_G0031030.1 mouse_genomes_project 6 137842899 137866351 - MGP_NODShiLtJ_P0079533 Rimklb protein_coding protein_coding MGP_NODShiLtJ_T0079534.1 MGP_NODShiLtJ_G0031030.1 mouse_genomes_project 6 137851274 137881355 - MGP_NODShiLtJ_P0079534 Rimklb protein_coding protein_coding MGP_NODShiLtJ_T0079637.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140428675 140473958 + Lpcat3 protein_coding retained_intron MGP_NODShiLtJ_T0079638.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140428675 140474006 + MGP_NODShiLtJ_P0079638 Lpcat3 protein_coding protein_coding MGP_NODShiLtJ_T0079639.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140428820 140471878 + MGP_NODShiLtJ_P0079639 Lpcat3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079640.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140428829 140469111 + Lpcat3 protein_coding retained_intron MGP_NODShiLtJ_T0079641.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140428863 140470170 + Lpcat3 protein_coding retained_intron MGP_NODShiLtJ_T0079642.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140471028 140472201 + Lpcat3 protein_coding retained_intron MGP_NODShiLtJ_T0079643.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140471844 140472646 + Lpcat3 protein_coding processed_transcript MGP_NODShiLtJ_T0079644.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140472342 140473516 + Lpcat3 protein_coding retained_intron MGP_NODShiLtJ_T0079645.1 MGP_NODShiLtJ_G0031065.1 mouse_genomes_project 6 140472592 140473605 + Lpcat3 protein_coding retained_intron MGP_NODShiLtJ_T0005013.1 MGP_NODShiLtJ_G0004273.1 mouse_genomes_project 6 130440389 130446681 + antisense antisense MGP_NODShiLtJ_T0004900.1 MGP_NODShiLtJ_G0004201.1 mouse_genomes_project 6 57388368 57395179 + Gm29430 antisense antisense MGP_NODShiLtJ_T0004901.1 MGP_NODShiLtJ_G0004201.1 mouse_genomes_project 6 57388983 57395106 + Gm29430 antisense antisense MGP_NODShiLtJ_T0015122.1 MGP_NODShiLtJ_G0013230.1 mouse_genomes_project 6 5100577 5100965 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078317.1 MGP_NODShiLtJ_G0030805.1 mouse_genomes_project 6 99250936 99276601 - MGP_NODShiLtJ_P0078317 Isy1 protein_coding protein_coding MGP_NODShiLtJ_T0078318.1 MGP_NODShiLtJ_G0030805.1 mouse_genomes_project 6 99258463 99276541 - MGP_NODShiLtJ_P0078318 Isy1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078319.1 MGP_NODShiLtJ_G0030805.1 mouse_genomes_project 6 99258533 99259510 - Isy1 protein_coding retained_intron MGP_NODShiLtJ_T0078320.1 MGP_NODShiLtJ_G0030805.1 mouse_genomes_project 6 99259347 99276503 - MGP_NODShiLtJ_P0078320 Isy1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078321.1 MGP_NODShiLtJ_G0030805.1 mouse_genomes_project 6 99262211 99276559 - Isy1 protein_coding retained_intron MGP_NODShiLtJ_T0078322.1 MGP_NODShiLtJ_G0030805.1 mouse_genomes_project 6 99263989 99276516 - Isy1 protein_coding retained_intron MGP_NODShiLtJ_T0078323.1 MGP_NODShiLtJ_G0030805.1 mouse_genomes_project 6 99264584 99276550 - MGP_NODShiLtJ_P0078323 Isy1 protein_coding protein_coding MGP_NODShiLtJ_T0078324.1 MGP_NODShiLtJ_G0030805.1 mouse_genomes_project 6 99271340 99276559 - Isy1 protein_coding retained_intron MGP_NODShiLtJ_T0002102.1 MGP_NODShiLtJ_G0002014.1 mouse_genomes_project 6 144254892 144256311 - TEC TEC MGP_NODShiLtJ_T0015327.1 MGP_NODShiLtJ_G0013435.1 mouse_genomes_project 6 88643698 88644194 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000195.1 MGP_NODShiLtJ_G0000142.1 mouse_genomes_project 6 78476944 78477412 - MGP_NODShiLtJ_P0000195 Igkv12-41 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0002088.1 MGP_NODShiLtJ_G0002000.1 mouse_genomes_project 6 135654847 135655319 - TEC TEC MGP_NODShiLtJ_T0002096.1 MGP_NODShiLtJ_G0002008.1 mouse_genomes_project 6 143333197 143335422 + TEC TEC MGP_NODShiLtJ_T0001935.1 MGP_NODShiLtJ_G0001847.1 mouse_genomes_project 6 51022735 51025263 + TEC TEC MGP_NODShiLtJ_T0015412.1 MGP_NODShiLtJ_G0013520.1 mouse_genomes_project 6 124475020 124475595 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101360.1 MGP_NODShiLtJ_G0039585.1 mouse_genomes_project 6 63388616 63388833 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0008557.1 MGP_NODShiLtJ_G0006911.1 mouse_genomes_project 6 81922229 81927536 + Gm26640 lincRNA lincRNA MGP_NODShiLtJ_T0078136.1 MGP_NODShiLtJ_G0030770.1 mouse_genomes_project 6 97189836 97192705 - MGP_NODShiLtJ_P0078136 Nat8f4 protein_coding protein_coding MGP_NODShiLtJ_T0078137.1 MGP_NODShiLtJ_G0030770.1 mouse_genomes_project 6 97189836 97192501 - MGP_NODShiLtJ_P0078137 Nat8f4 protein_coding protein_coding MGP_NODShiLtJ_T0098441.1 MGP_NODShiLtJ_G0036842.1 mouse_genomes_project 6 155178093 155178401 + Gm44258 sense_intronic sense_intronic MGP_NODShiLtJ_T0011529.1 MGP_NODShiLtJ_G0009662.1 mouse_genomes_project 6 52601744 52601846 + Rny3 misc_RNA misc_RNA MGP_NODShiLtJ_T0015115.1 MGP_NODShiLtJ_G0013223.1 mouse_genomes_project 6 3468949 3469174 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079850.1 MGP_NODShiLtJ_G0031097.1 mouse_genomes_project 6 141023529 141030289 + MGP_NODShiLtJ_P0079850 Vamp1 protein_coding protein_coding MGP_NODShiLtJ_T0079851.1 MGP_NODShiLtJ_G0031097.1 mouse_genomes_project 6 141023559 141030146 + MGP_NODShiLtJ_P0079851 Vamp1 protein_coding protein_coding MGP_NODShiLtJ_T0079852.1 MGP_NODShiLtJ_G0031097.1 mouse_genomes_project 6 141023559 141049221 + MGP_NODShiLtJ_P0079852 Vamp1 protein_coding protein_coding MGP_NODShiLtJ_T0079853.1 MGP_NODShiLtJ_G0031097.1 mouse_genomes_project 6 141026559 141029638 + MGP_NODShiLtJ_P0079853 Vamp1 protein_coding protein_coding MGP_NODShiLtJ_T0079855.1 MGP_NODShiLtJ_G0031097.1 mouse_genomes_project 6 141039293 141053998 + Vamp1 protein_coding processed_transcript MGP_NODShiLtJ_T0079856.1 MGP_NODShiLtJ_G0031097.1 mouse_genomes_project 6 141039293 141047906 + Vamp1 protein_coding processed_transcript MGP_NODShiLtJ_T0015454.1 MGP_NODShiLtJ_G0013562.1 mouse_genomes_project 6 137950383 137950574 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015263.1 MGP_NODShiLtJ_G0013371.1 mouse_genomes_project 6 71447046 71447262 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100713.1 MGP_NODShiLtJ_G0039107.1 mouse_genomes_project 6 139713531 139713650 + Gm22916 snoRNA snoRNA MGP_NODShiLtJ_T0075996.1 MGP_NODShiLtJ_G0030271.1 mouse_genomes_project 6 13469446 13546101 - MGP_NODShiLtJ_P0075996 Ppp1r3a protein_coding protein_coding MGP_NODShiLtJ_T0079348.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134485967 134788730 - MGP_NODShiLtJ_P0079348 Erc1 protein_coding protein_coding MGP_NODShiLtJ_T0079349.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134485975 134760359 - MGP_NODShiLtJ_P0079349 Erc1 protein_coding protein_coding MGP_NODShiLtJ_T0079350.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134487801 134788679 - MGP_NODShiLtJ_P0079350 Erc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079351.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134488879 134788639 - MGP_NODShiLtJ_P0079351 Erc1 protein_coding protein_coding MGP_NODShiLtJ_T0079352.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134489728 134788695 - MGP_NODShiLtJ_P0079352 Erc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079353.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134490163 134674474 - MGP_NODShiLtJ_P0079353 Erc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079354.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134490398 134788714 - MGP_NODShiLtJ_P0079354 Erc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079355.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134490468 134788747 - MGP_NODShiLtJ_P0079355 Erc1 protein_coding protein_coding MGP_NODShiLtJ_T0079356.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134490683 134788669 - MGP_NODShiLtJ_P0079356 Erc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079357.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134535612 134541080 - Erc1 protein_coding retained_intron MGP_NODShiLtJ_T0079358.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134537225 134760972 - MGP_NODShiLtJ_P0079358 Erc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079359.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134651194 134729082 - Erc1 protein_coding processed_transcript MGP_NODShiLtJ_T0079360.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134704544 134788682 - MGP_NODShiLtJ_P0079360 Erc1 protein_coding protein_coding MGP_NODShiLtJ_T0079361.1 MGP_NODShiLtJ_G0031001.1 mouse_genomes_project 6 134759117 134761593 - Erc1 protein_coding retained_intron MGP_NODShiLtJ_T0018151.1 MGP_NODShiLtJ_G0015512.1 mouse_genomes_project 6 137947141 137957939 - Gm16556 processed_transcript processed_transcript MGP_NODShiLtJ_T0018152.1 MGP_NODShiLtJ_G0015512.1 mouse_genomes_project 6 137947167 137957915 - Gm16556 processed_transcript processed_transcript MGP_NODShiLtJ_T0079406.1 MGP_NODShiLtJ_G0031006.1 mouse_genomes_project 6 135334103 135335172 + MGP_NODShiLtJ_P0079406 D330020A13Rik protein_coding protein_coding MGP_NODShiLtJ_T0102035.1 MGP_NODShiLtJ_G0040202.1 mouse_genomes_project 6 147004968 147016289 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0077442.1 MGP_NODShiLtJ_G0030621.1 mouse_genomes_project 6 64222835 64223858 + MGP_NODShiLtJ_P0077442 Vmn1r29 protein_coding protein_coding MGP_NODShiLtJ_T0076897.1 MGP_NODShiLtJ_G0030470.1 mouse_genomes_project 6 46423193 46428895 + MGP_NODShiLtJ_P0076897 Olfr449 protein_coding protein_coding MGP_NODShiLtJ_T0076898.1 MGP_NODShiLtJ_G0030470.1 mouse_genomes_project 6 46423193 46428709 + MGP_NODShiLtJ_P0076898 Olfr449 protein_coding protein_coding MGP_NODShiLtJ_T0076899.1 MGP_NODShiLtJ_G0030470.1 mouse_genomes_project 6 46423241 46428375 + MGP_NODShiLtJ_P0076899 Olfr449 protein_coding protein_coding MGP_NODShiLtJ_T0076900.1 MGP_NODShiLtJ_G0030470.1 mouse_genomes_project 6 46428286 46429323 + MGP_NODShiLtJ_P0076900 Olfr449 protein_coding protein_coding MGP_NODShiLtJ_T0015203.1 MGP_NODShiLtJ_G0013311.1 mouse_genomes_project 6 49045656 49046359 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076774.1 MGP_NODShiLtJ_G0030421.1 mouse_genomes_project 6 43827579 43828640 + MGP_NODShiLtJ_P0076774 Olfr460 protein_coding protein_coding MGP_NODShiLtJ_T0079864.1 MGP_NODShiLtJ_G0031101.1 mouse_genomes_project 6 141132886 141141724 - MGP_NODShiLtJ_P0079864 Ltbr protein_coding protein_coding MGP_NODShiLtJ_T0079865.1 MGP_NODShiLtJ_G0031101.1 mouse_genomes_project 6 141136942 141137396 - Ltbr protein_coding retained_intron MGP_NODShiLtJ_T0079866.1 MGP_NODShiLtJ_G0031101.1 mouse_genomes_project 6 141140571 141141104 - Ltbr protein_coding retained_intron MGP_NODShiLtJ_T0102043.1 MGP_NODShiLtJ_G0040210.1 mouse_genomes_project 6 149923062 149923964 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0076773.1 MGP_NODShiLtJ_G0030420.1 mouse_genomes_project 6 43805044 43805986 - MGP_NODShiLtJ_P0076773 Olfr461 protein_coding protein_coding MGP_NODShiLtJ_T0077135.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55141505 55239809 + MGP_NODShiLtJ_P0077135 Mpp6 protein_coding protein_coding MGP_NODShiLtJ_T0077136.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55141513 55239798 + MGP_NODShiLtJ_P0077136 Mpp6 protein_coding protein_coding MGP_NODShiLtJ_T0077137.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55141542 55240150 + MGP_NODShiLtJ_P0077137 Mpp6 protein_coding protein_coding MGP_NODShiLtJ_T0077138.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55141544 55145074 + Mpp6 protein_coding retained_intron MGP_NODShiLtJ_T0077139.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55141647 55239635 + MGP_NODShiLtJ_P0077139 Mpp6 protein_coding protein_coding MGP_NODShiLtJ_T0077140.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55141671 55200780 + MGP_NODShiLtJ_P0077140 Mpp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077141.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55142124 55222055 + MGP_NODShiLtJ_P0077141 Mpp6 protein_coding protein_coding MGP_NODShiLtJ_T0077142.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55221741 55238004 + Mpp6 protein_coding processed_transcript MGP_NODShiLtJ_T0077145.1 MGP_NODShiLtJ_G0030531.1 mouse_genomes_project 6 55235861 55239538 + Mpp6 protein_coding retained_intron MGP_NODShiLtJ_T0015524.1 MGP_NODShiLtJ_G0013632.1 mouse_genomes_project 6 158333378 158333820 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015202.1 MGP_NODShiLtJ_G0013310.1 mouse_genomes_project 6 48846207 48847104 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102022.1 MGP_NODShiLtJ_G0040190.1 mouse_genomes_project 6 101803947 101804890 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0077413.1 MGP_NODShiLtJ_G0030606.1 mouse_genomes_project 6 63266837 63363975 + MGP_NODShiLtJ_P0077413 Herc6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0077414.1 MGP_NODShiLtJ_G0030606.1 mouse_genomes_project 6 63266864 63362961 + MGP_NODShiLtJ_P0077414 Herc6 protein_coding protein_coding MGP_NODShiLtJ_T0077415.1 MGP_NODShiLtJ_G0030606.1 mouse_genomes_project 6 63266872 63270298 + MGP_NODShiLtJ_P0077415 Herc6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077416.1 MGP_NODShiLtJ_G0030606.1 mouse_genomes_project 6 63293300 63316211 + Herc6 protein_coding retained_intron MGP_NODShiLtJ_T0077417.1 MGP_NODShiLtJ_G0030606.1 mouse_genomes_project 6 63295738 63300123 + Herc6 protein_coding retained_intron MGP_NODShiLtJ_T0077418.1 MGP_NODShiLtJ_G0030606.1 mouse_genomes_project 6 63296667 63308779 + Herc6 protein_coding retained_intron MGP_NODShiLtJ_T0077419.1 MGP_NODShiLtJ_G0030606.1 mouse_genomes_project 6 63300060 63310036 + Herc6 protein_coding retained_intron MGP_NODShiLtJ_T0076608.1 MGP_NODShiLtJ_G0030383.1 mouse_genomes_project 6 39711233 40198311 - MGP_NODShiLtJ_P0076608 Dgki protein_coding protein_coding MGP_NODShiLtJ_T0076609.1 MGP_NODShiLtJ_G0030383.1 mouse_genomes_project 6 39712192 40198521 - MGP_NODShiLtJ_P0076609 Dgki protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076610.1 MGP_NODShiLtJ_G0030383.1 mouse_genomes_project 6 39712192 40198521 - MGP_NODShiLtJ_P0076610 Dgki protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076611.1 MGP_NODShiLtJ_G0030383.1 mouse_genomes_project 6 39712192 40198521 - MGP_NODShiLtJ_P0076611 Dgki protein_coding protein_coding MGP_NODShiLtJ_T0076612.1 MGP_NODShiLtJ_G0030383.1 mouse_genomes_project 6 39712367 40197974 - MGP_NODShiLtJ_P0076612 Dgki protein_coding protein_coding MGP_NODShiLtJ_T0076613.1 MGP_NODShiLtJ_G0030383.1 mouse_genomes_project 6 39781285 39909606 - Dgki protein_coding processed_transcript MGP_NODShiLtJ_T0076614.1 MGP_NODShiLtJ_G0030383.1 mouse_genomes_project 6 39913185 39943933 - Dgki protein_coding processed_transcript MGP_NODShiLtJ_T0076615.1 MGP_NODShiLtJ_G0030383.1 mouse_genomes_project 6 40125888 40198081 - Dgki protein_coding processed_transcript MGP_NODShiLtJ_T0018149.1 MGP_NODShiLtJ_G0015511.1 mouse_genomes_project 6 136167532 136173009 + Gm4651 processed_transcript antisense MGP_NODShiLtJ_T0018150.1 MGP_NODShiLtJ_G0015511.1 mouse_genomes_project 6 136167664 136169156 + Gm4651 processed_transcript retained_intron MGP_NODShiLtJ_T0100715.1 MGP_NODShiLtJ_G0039109.1 mouse_genomes_project 6 139992544 139992676 - Gm25311 snoRNA snoRNA MGP_NODShiLtJ_T0008593.1 MGP_NODShiLtJ_G0006938.1 mouse_genomes_project 6 100790134 100791496 - Gm44204 lincRNA lincRNA MGP_NODShiLtJ_T0078927.1 MGP_NODShiLtJ_G0030924.1 mouse_genomes_project 6 127797987 127805849 + MGP_NODShiLtJ_P0078927 Ogg1 protein_coding protein_coding MGP_NODShiLtJ_T0078928.1 MGP_NODShiLtJ_G0030924.1 mouse_genomes_project 6 127798000 127799442 + Ogg1 protein_coding retained_intron MGP_NODShiLtJ_T0078929.1 MGP_NODShiLtJ_G0030924.1 mouse_genomes_project 6 127798014 127805845 + MGP_NODShiLtJ_P0078929 Ogg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078930.1 MGP_NODShiLtJ_G0030924.1 mouse_genomes_project 6 127798023 127799949 + Ogg1 protein_coding processed_transcript MGP_NODShiLtJ_T0078931.1 MGP_NODShiLtJ_G0030924.1 mouse_genomes_project 6 127798028 127804593 + MGP_NODShiLtJ_P0078931 Ogg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078932.1 MGP_NODShiLtJ_G0030924.1 mouse_genomes_project 6 127798126 127799573 + Ogg1 protein_coding retained_intron MGP_NODShiLtJ_T0078933.1 MGP_NODShiLtJ_G0030924.1 mouse_genomes_project 6 127803925 127806729 + Ogg1 protein_coding retained_intron MGP_NODShiLtJ_T0008543.1 MGP_NODShiLtJ_G0006898.1 mouse_genomes_project 6 67117133 67121547 + Gm35386 lincRNA lincRNA MGP_NODShiLtJ_T0100703.1 MGP_NODShiLtJ_G0039097.1 mouse_genomes_project 6 131481536 131481660 - Gm22882 snoRNA snoRNA MGP_NODShiLtJ_T0001990.1 MGP_NODShiLtJ_G0001902.1 mouse_genomes_project 6 90974884 90976546 + TEC TEC MGP_NODShiLtJ_T0008594.1 MGP_NODShiLtJ_G0006939.1 mouse_genomes_project 6 100801747 100817593 - Gm44205 lincRNA lincRNA MGP_NODShiLtJ_T0008595.1 MGP_NODShiLtJ_G0006939.1 mouse_genomes_project 6 100801753 100805441 - Gm44205 lincRNA lincRNA MGP_NODShiLtJ_T0008596.1 MGP_NODShiLtJ_G0006939.1 mouse_genomes_project 6 100816518 100817562 - Gm44205 lincRNA lincRNA MGP_NODShiLtJ_T0080160.1 MGP_NODShiLtJ_G0031188.1 mouse_genomes_project 6 149152115 149265327 - MGP_NODShiLtJ_P0080160 Gm8882 protein_coding protein_coding MGP_NODShiLtJ_T0001914.1 MGP_NODShiLtJ_G0001826.1 mouse_genomes_project 6 44211590 44212933 - TEC TEC MGP_NODShiLtJ_T0004950.1 MGP_NODShiLtJ_G0004235.1 mouse_genomes_project 6 97707574 97710320 - Gm44941 antisense antisense MGP_NODShiLtJ_T0000220.1 MGP_NODShiLtJ_G0000160.1 mouse_genomes_project 6 79423447 79425320 + MGP_NODShiLtJ_P0000220 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0001882.1 MGP_NODShiLtJ_G0001794.1 mouse_genomes_project 6 14842217 14843953 + TEC TEC MGP_NODShiLtJ_T0015218.1 MGP_NODShiLtJ_G0013326.1 mouse_genomes_project 6 53919421 53921851 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005027.1 MGP_NODShiLtJ_G0004287.1 mouse_genomes_project 6 141321988 141326375 + Gm28809 antisense antisense MGP_NODShiLtJ_T0005028.1 MGP_NODShiLtJ_G0004287.1 mouse_genomes_project 6 141322569 141324156 + Gm28809 antisense antisense MGP_NODShiLtJ_T0004856.1 MGP_NODShiLtJ_G0004166.1 mouse_genomes_project 6 17910990 17914157 + Gm15594 antisense antisense MGP_NODShiLtJ_T0077234.1 MGP_NODShiLtJ_G0030556.1 mouse_genomes_project 6 57781761 57899483 - MGP_NODShiLtJ_P0077234 Hibadh protein_coding protein_coding MGP_NODShiLtJ_T0077235.1 MGP_NODShiLtJ_G0030556.1 mouse_genomes_project 6 57782229 57884353 - Hibadh protein_coding retained_intron MGP_NODShiLtJ_T0077236.1 MGP_NODShiLtJ_G0030556.1 mouse_genomes_project 6 57784385 57793461 - Hibadh protein_coding retained_intron MGP_NODShiLtJ_T0077237.1 MGP_NODShiLtJ_G0030556.1 mouse_genomes_project 6 57790959 57793063 - Hibadh protein_coding retained_intron MGP_NODShiLtJ_T0077238.1 MGP_NODShiLtJ_G0030556.1 mouse_genomes_project 6 57889701 57899409 - Hibadh protein_coding retained_intron MGP_NODShiLtJ_T0000213.1 MGP_NODShiLtJ_G0000154.1 mouse_genomes_project 6 79092926 79093242 - MGP_NODShiLtJ_P0000213 Igkv8-27 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000215.1 MGP_NODShiLtJ_G0000154.1 mouse_genomes_project 6 79092926 79093231 - MGP_NODShiLtJ_P0000215 Igkv8-27 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0015212.1 MGP_NODShiLtJ_G0013320.1 mouse_genomes_project 6 53565554 53566012 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011522.1 MGP_NODShiLtJ_G0009655.1 mouse_genomes_project 6 18708657 18708972 + Gm22718 misc_RNA misc_RNA MGP_NODShiLtJ_T0099412.1 MGP_NODShiLtJ_G0037806.1 mouse_genomes_project 6 13155354 13155460 - Gm23013 snRNA snRNA MGP_NODShiLtJ_T0004864.1 MGP_NODShiLtJ_G0004173.1 mouse_genomes_project 6 33002437 33003333 - Gm44296 antisense antisense MGP_NODShiLtJ_T0001911.1 MGP_NODShiLtJ_G0001823.1 mouse_genomes_project 6 43261267 43262981 + TEC TEC MGP_NODShiLtJ_T0008530.1 MGP_NODShiLtJ_G0006886.1 mouse_genomes_project 6 57718650 57726949 + 1700094M24Rik lincRNA lincRNA MGP_NODShiLtJ_T0078894.1 MGP_NODShiLtJ_G0030920.1 mouse_genomes_project 6 127627636 127658881 - MGP_NODShiLtJ_P0078894 Lhfpl4 protein_coding protein_coding MGP_NODShiLtJ_T0078895.1 MGP_NODShiLtJ_G0030920.1 mouse_genomes_project 6 127635983 127656468 - MGP_NODShiLtJ_P0078895 Lhfpl4 protein_coding protein_coding MGP_NODShiLtJ_T0099452.1 MGP_NODShiLtJ_G0037846.1 mouse_genomes_project 6 127487521 127487696 - Gm23244 snRNA snRNA MGP_NODShiLtJ_T0101979.1 MGP_NODShiLtJ_G0040147.1 mouse_genomes_project 6 41612061 41626791 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0080066.1 MGP_NODShiLtJ_G0031151.1 mouse_genomes_project 6 145716243 145734127 + MGP_NODShiLtJ_P0080066 Clec12a protein_coding protein_coding MGP_NODShiLtJ_T0080067.1 MGP_NODShiLtJ_G0031151.1 mouse_genomes_project 6 145723291 145728415 + Clec12a protein_coding retained_intron MGP_NODShiLtJ_T0080068.1 MGP_NODShiLtJ_G0031151.1 mouse_genomes_project 6 145723513 145743309 + MGP_NODShiLtJ_P0080068 Clec12a protein_coding protein_coding MGP_NODShiLtJ_T0080069.1 MGP_NODShiLtJ_G0031151.1 mouse_genomes_project 6 145731593 145742420 + Clec12a protein_coding retained_intron MGP_NODShiLtJ_T0079510.1 MGP_NODShiLtJ_G0031028.1 mouse_genomes_project 6 137672443 137680010 + MGP_NODShiLtJ_P0079510 M6pr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079511.1 MGP_NODShiLtJ_G0031028.1 mouse_genomes_project 6 137672547 137683482 + M6pr protein_coding retained_intron MGP_NODShiLtJ_T0079960.1 MGP_NODShiLtJ_G0031124.1 mouse_genomes_project 6 143945394 144017725 + MGP_NODShiLtJ_P0079960 Tspan11 protein_coding protein_coding MGP_NODShiLtJ_T0079961.1 MGP_NODShiLtJ_G0031124.1 mouse_genomes_project 6 143945577 143981681 + Tspan11 protein_coding retained_intron MGP_NODShiLtJ_T0076021.1 MGP_NODShiLtJ_G0030274.1 mouse_genomes_project 6 16147296 16186401 - MGP_NODShiLtJ_P0076021 Tfec protein_coding protein_coding MGP_NODShiLtJ_T0076022.1 MGP_NODShiLtJ_G0030274.1 mouse_genomes_project 6 16147302 16229086 - MGP_NODShiLtJ_P0076022 Tfec protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076023.1 MGP_NODShiLtJ_G0030274.1 mouse_genomes_project 6 16148606 16149178 - MGP_NODShiLtJ_P0076023 Tfec protein_coding protein_coding MGP_NODShiLtJ_T0076024.1 MGP_NODShiLtJ_G0030274.1 mouse_genomes_project 6 16156904 16229128 - Tfec protein_coding retained_intron MGP_NODShiLtJ_T0076025.1 MGP_NODShiLtJ_G0030274.1 mouse_genomes_project 6 16159685 16161485 - Tfec protein_coding retained_intron MGP_NODShiLtJ_T0102002.1 MGP_NODShiLtJ_G0040170.1 mouse_genomes_project 6 63950130 63951024 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0079244.1 MGP_NODShiLtJ_G0030982.1 mouse_genomes_project 6 131415112 131439992 - MGP_NODShiLtJ_P0079244 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079245.1 MGP_NODShiLtJ_G0030982.1 mouse_genomes_project 6 131415335 131440144 - MGP_NODShiLtJ_P0079245 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076050.1 MGP_NODShiLtJ_G0030279.1 mouse_genomes_project 6 17035870 17056807 + Capza2 protein_coding processed_transcript MGP_NODShiLtJ_T0076051.1 MGP_NODShiLtJ_G0030279.1 mouse_genomes_project 6 17036627 17067323 + MGP_NODShiLtJ_P0076051 Capza2 protein_coding protein_coding MGP_NODShiLtJ_T0076052.1 MGP_NODShiLtJ_G0030279.1 mouse_genomes_project 6 17036679 17059952 + Capza2 protein_coding retained_intron MGP_NODShiLtJ_T0076053.1 MGP_NODShiLtJ_G0030279.1 mouse_genomes_project 6 17036686 17056757 + Capza2 protein_coding processed_transcript MGP_NODShiLtJ_T0076054.1 MGP_NODShiLtJ_G0030279.1 mouse_genomes_project 6 17036754 17065945 + MGP_NODShiLtJ_P0076054 Capza2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076055.1 MGP_NODShiLtJ_G0030279.1 mouse_genomes_project 6 17036757 17061117 + MGP_NODShiLtJ_P0076055 Capza2 protein_coding protein_coding MGP_NODShiLtJ_T0076056.1 MGP_NODShiLtJ_G0030279.1 mouse_genomes_project 6 17060912 17066035 + Capza2 protein_coding retained_intron MGP_NODShiLtJ_T0015177.1 MGP_NODShiLtJ_G0013285.1 mouse_genomes_project 6 39455515 39455943 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018111.1 MGP_NODShiLtJ_G0015497.1 mouse_genomes_project 6 59299458 59339576 + 4921529L05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018112.1 MGP_NODShiLtJ_G0015497.1 mouse_genomes_project 6 59299468 59302562 + 4921529L05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018113.1 MGP_NODShiLtJ_G0015497.1 mouse_genomes_project 6 59299496 59332732 + 4921529L05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018114.1 MGP_NODShiLtJ_G0015497.1 mouse_genomes_project 6 59332657 59340221 + 4921529L05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0078334.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99328871 99354399 + MGP_NODShiLtJ_P0078334 Copg1 protein_coding protein_coding MGP_NODShiLtJ_T0078335.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99328985 99331817 + MGP_NODShiLtJ_P0078335 Copg1 protein_coding protein_coding MGP_NODShiLtJ_T0078336.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99328997 99334865 + Copg1 protein_coding processed_transcript MGP_NODShiLtJ_T0078337.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99329014 99336020 + Copg1 protein_coding retained_intron MGP_NODShiLtJ_T0078338.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99335000 99343412 + Copg1 protein_coding retained_intron MGP_NODShiLtJ_T0078339.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99336173 99337160 + Copg1 protein_coding retained_intron MGP_NODShiLtJ_T0078340.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99336513 99345925 + Copg1 protein_coding retained_intron MGP_NODShiLtJ_T0078341.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99337054 99353334 + Copg1 protein_coding retained_intron MGP_NODShiLtJ_T0078342.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99338860 99343824 + Copg1 protein_coding retained_intron MGP_NODShiLtJ_T0078343.1 MGP_NODShiLtJ_G0030807.1 mouse_genomes_project 6 99349575 99350858 + Copg1 protein_coding processed_transcript MGP_NODShiLtJ_T0002141.1 MGP_NODShiLtJ_G0002053.1 mouse_genomes_project 6 167237702 167243149 - TEC TEC MGP_NODShiLtJ_T0001895.1 MGP_NODShiLtJ_G0001807.1 mouse_genomes_project 6 30253870 30257939 - TEC TEC MGP_NODShiLtJ_T0102029.1 MGP_NODShiLtJ_G0040197.1 mouse_genomes_project 6 144812750 144822097 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102030.1 MGP_NODShiLtJ_G0040197.1 mouse_genomes_project 6 144813852 144815704 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0077267.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59361776 59390864 + Chn2 protein_coding processed_transcript MGP_NODShiLtJ_T0077268.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59361795 59637251 + MGP_NODShiLtJ_P0077268 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077269.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59361835 59554094 + MGP_NODShiLtJ_P0077269 Chn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077270.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59362261 59556056 + Chn2 protein_coding processed_transcript MGP_NODShiLtJ_T0077271.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59362308 59528285 + MGP_NODShiLtJ_P0077271 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077272.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59420745 59554061 + Chn2 protein_coding processed_transcript MGP_NODShiLtJ_T0077273.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59598319 59636823 + MGP_NODShiLtJ_P0077273 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077274.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59600576 59636615 + MGP_NODShiLtJ_P0077274 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077275.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59602595 59636921 + MGP_NODShiLtJ_P0077275 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077276.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59605920 59638340 + MGP_NODShiLtJ_P0077276 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077277.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59606338 59636774 + MGP_NODShiLtJ_P0077277 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077278.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59606338 59636774 + MGP_NODShiLtJ_P0077278 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077279.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59606338 59636774 + MGP_NODShiLtJ_P0077279 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077280.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59606338 59636774 + MGP_NODShiLtJ_P0077280 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0077281.1 MGP_NODShiLtJ_G0030562.1 mouse_genomes_project 6 59606338 59636774 + MGP_NODShiLtJ_P0077281 Chn2 protein_coding protein_coding MGP_NODShiLtJ_T0100710.1 MGP_NODShiLtJ_G0039104.1 mouse_genomes_project 6 139345886 139346003 - Gm23079 snoRNA snoRNA MGP_NODShiLtJ_T0098073.1 MGP_NODShiLtJ_G0036485.1 mouse_genomes_project 6 163703217 163703332 - Gm23071 rRNA rRNA MGP_NODShiLtJ_T0102017.1 MGP_NODShiLtJ_G0040185.1 mouse_genomes_project 6 101224047 101224846 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002135.1 MGP_NODShiLtJ_G0002047.1 mouse_genomes_project 6 164986805 164989154 - TEC TEC MGP_NODShiLtJ_T0010708.1 MGP_NODShiLtJ_G0008841.1 mouse_genomes_project 6 144171492 144171602 - Gm26338 miRNA miRNA MGP_NODShiLtJ_T0080072.1 MGP_NODShiLtJ_G0031153.1 mouse_genomes_project 6 145782562 145791116 + MGP_NODShiLtJ_P0080072 Clec1b protein_coding protein_coding MGP_NODShiLtJ_T0080073.1 MGP_NODShiLtJ_G0031153.1 mouse_genomes_project 6 145782872 145791046 + MGP_NODShiLtJ_P0080073 Clec1b protein_coding protein_coding MGP_NODShiLtJ_T0080074.1 MGP_NODShiLtJ_G0031153.1 mouse_genomes_project 6 145782875 145791042 + MGP_NODShiLtJ_P0080074 Clec1b protein_coding protein_coding MGP_NODShiLtJ_T0080075.1 MGP_NODShiLtJ_G0031153.1 mouse_genomes_project 6 145788807 145795124 + Clec1b protein_coding retained_intron MGP_NODShiLtJ_T0076521.1 MGP_NODShiLtJ_G0030368.1 mouse_genomes_project 6 37001543 37030089 + MGP_NODShiLtJ_P0076521 Bpgm protein_coding protein_coding MGP_NODShiLtJ_T0076522.1 MGP_NODShiLtJ_G0030368.1 mouse_genomes_project 6 37001692 37015284 + Bpgm protein_coding retained_intron MGP_NODShiLtJ_T0076523.1 MGP_NODShiLtJ_G0030368.1 mouse_genomes_project 6 37001788 37013888 + MGP_NODShiLtJ_P0076523 Bpgm protein_coding protein_coding MGP_NODShiLtJ_T0076524.1 MGP_NODShiLtJ_G0030368.1 mouse_genomes_project 6 37001815 37013948 + MGP_NODShiLtJ_P0076524 Bpgm protein_coding protein_coding MGP_NODShiLtJ_T0076525.1 MGP_NODShiLtJ_G0030368.1 mouse_genomes_project 6 37002478 37014049 + MGP_NODShiLtJ_P0076525 Bpgm protein_coding protein_coding MGP_NODShiLtJ_T0015426.1 MGP_NODShiLtJ_G0013534.1 mouse_genomes_project 6 129322644 129323032 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080732.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167656483 167683187 - Ipo8 protein_coding retained_intron MGP_NODShiLtJ_T0080733.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167656483 167731223 - MGP_NODShiLtJ_P0080733 Ipo8 protein_coding protein_coding MGP_NODShiLtJ_T0080734.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167656493 167661409 - Ipo8 protein_coding retained_intron MGP_NODShiLtJ_T0080735.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167662087 167664493 - Ipo8 protein_coding retained_intron MGP_NODShiLtJ_T0080736.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167662696 167675850 - Ipo8 protein_coding retained_intron MGP_NODShiLtJ_T0080737.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167677781 167694786 - Ipo8 protein_coding retained_intron MGP_NODShiLtJ_T0080738.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167686931 167722652 - Ipo8 protein_coding retained_intron MGP_NODShiLtJ_T0080739.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167697897 167715965 - Ipo8 protein_coding processed_transcript MGP_NODShiLtJ_T0080740.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167697898 167731220 - MGP_NODShiLtJ_P0080740 Ipo8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080741.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167697900 167731182 - MGP_NODShiLtJ_P0080741 Ipo8 protein_coding protein_coding MGP_NODShiLtJ_T0080742.1 MGP_NODShiLtJ_G0031316.1 mouse_genomes_project 6 167717495 167720402 - Ipo8 protein_coding retained_intron MGP_NODShiLtJ_T0015395.1 MGP_NODShiLtJ_G0013503.1 mouse_genomes_project 6 116491026 116491983 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080174.1 MGP_NODShiLtJ_G0031200.1 mouse_genomes_project 6 149872857 149873808 + MGP_NODShiLtJ_P0080174 Tas2r109 protein_coding protein_coding MGP_NODShiLtJ_T0004916.1 MGP_NODShiLtJ_G0004214.1 mouse_genomes_project 6 80363017 80363941 - 1700040L08Rik antisense antisense MGP_NODShiLtJ_T0015347.1 MGP_NODShiLtJ_G0013455.1 mouse_genomes_project 6 96291969 96293689 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015374.1 MGP_NODShiLtJ_G0013482.1 mouse_genomes_project 6 107194870 107195221 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001966.1 MGP_NODShiLtJ_G0001878.1 mouse_genomes_project 6 80973265 80975858 + TEC TEC MGP_NODShiLtJ_T0015543.1 MGP_NODShiLtJ_G0013651.1 mouse_genomes_project 6 167939239 167939651 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004886.1 MGP_NODShiLtJ_G0004192.1 mouse_genomes_project 6 45883771 45893687 + 2010310C07Rik antisense antisense MGP_NODShiLtJ_T0004887.1 MGP_NODShiLtJ_G0004192.1 mouse_genomes_project 6 45891087 45894347 + 2010310C07Rik antisense antisense MGP_NODShiLtJ_T0001944.1 MGP_NODShiLtJ_G0001856.1 mouse_genomes_project 6 57849945 57855024 - TEC TEC MGP_NODShiLtJ_T0015172.1 MGP_NODShiLtJ_G0013280.1 mouse_genomes_project 6 35650948 35651720 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078505.1 MGP_NODShiLtJ_G0030845.1 mouse_genomes_project 6 102032335 102045002 + MGP_NODShiLtJ_P0078505 Klf15 protein_coding protein_coding MGP_NODShiLtJ_T0078506.1 MGP_NODShiLtJ_G0030845.1 mouse_genomes_project 6 102032433 102045002 + MGP_NODShiLtJ_P0078506 Klf15 protein_coding protein_coding MGP_NODShiLtJ_T0078507.1 MGP_NODShiLtJ_G0030845.1 mouse_genomes_project 6 102035063 102044999 + MGP_NODShiLtJ_P0078507 Klf15 protein_coding protein_coding MGP_NODShiLtJ_T0078508.1 MGP_NODShiLtJ_G0030845.1 mouse_genomes_project 6 102036159 102044999 + MGP_NODShiLtJ_P0078508 Klf15 protein_coding protein_coding MGP_NODShiLtJ_T0078509.1 MGP_NODShiLtJ_G0030845.1 mouse_genomes_project 6 102036877 102044984 + MGP_NODShiLtJ_P0078509 Klf15 protein_coding protein_coding MGP_NODShiLtJ_T0005048.1 MGP_NODShiLtJ_G0004304.1 mouse_genomes_project 6 152336001 152339100 + 2810454H06Rik antisense antisense MGP_NODShiLtJ_T0015461.1 MGP_NODShiLtJ_G0013569.1 mouse_genomes_project 6 139920991 139921925 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005069.1 MGP_NODShiLtJ_G0004322.1 mouse_genomes_project 6 163864913 163870115 + Gm15543 antisense antisense MGP_NODShiLtJ_T0002123.1 MGP_NODShiLtJ_G0002035.1 mouse_genomes_project 6 157933838 157935720 + TEC TEC MGP_NODShiLtJ_T0080040.1 MGP_NODShiLtJ_G0031141.1 mouse_genomes_project 6 144993461 145022656 - MGP_NODShiLtJ_P0080040 protein_coding protein_coding MGP_NODShiLtJ_T0080167.1 MGP_NODShiLtJ_G0031193.1 mouse_genomes_project 6 149717691 149718609 - MGP_NODShiLtJ_P0080167 Tas2r121 protein_coding protein_coding MGP_NODShiLtJ_T0100665.1 MGP_NODShiLtJ_G0039059.1 mouse_genomes_project 6 51109473 51109605 - Gm25161 snoRNA snoRNA MGP_NODShiLtJ_T0078612.1 MGP_NODShiLtJ_G0030863.1 mouse_genomes_project 6 103836692 103852004 - MGP_NODShiLtJ_P0078612 Mrps25 protein_coding protein_coding MGP_NODShiLtJ_T0078613.1 MGP_NODShiLtJ_G0030863.1 mouse_genomes_project 6 103842820 103843885 - Mrps25 protein_coding retained_intron MGP_NODShiLtJ_T0078614.1 MGP_NODShiLtJ_G0030863.1 mouse_genomes_project 6 103846286 103851942 - Mrps25 protein_coding retained_intron MGP_NODShiLtJ_T0002444.1 MGP_NODShiLtJ_G0002352.1 mouse_genomes_project 6 44998622 45001275 + MGP_NODShiLtJ_P0002444 Trbc1 TR_C_gene TR_C_gene MGP_NODShiLtJ_T0001913.1 MGP_NODShiLtJ_G0001825.1 mouse_genomes_project 6 43470419 43473246 + TEC TEC MGP_NODShiLtJ_T0015386.1 MGP_NODShiLtJ_G0013494.1 mouse_genomes_project 6 113053464 113053886 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077590.1 MGP_NODShiLtJ_G0030658.1 mouse_genomes_project 6 79655867 79663132 - MGP_NODShiLtJ_P0077590 Tex37 protein_coding protein_coding MGP_NODShiLtJ_T0079027.1 MGP_NODShiLtJ_G0030943.1 mouse_genomes_project 6 128216115 128219847 - MGP_NODShiLtJ_P0079027 Ghrl protein_coding protein_coding MGP_NODShiLtJ_T0079028.1 MGP_NODShiLtJ_G0030943.1 mouse_genomes_project 6 128216115 128217689 - MGP_NODShiLtJ_P0079028 Ghrl protein_coding protein_coding MGP_NODShiLtJ_T0079029.1 MGP_NODShiLtJ_G0030943.1 mouse_genomes_project 6 128216120 128219425 - MGP_NODShiLtJ_P0079029 Ghrl protein_coding protein_coding MGP_NODShiLtJ_T0079030.1 MGP_NODShiLtJ_G0030943.1 mouse_genomes_project 6 128216128 128219815 - MGP_NODShiLtJ_P0079030 Ghrl protein_coding protein_coding MGP_NODShiLtJ_T0079031.1 MGP_NODShiLtJ_G0030943.1 mouse_genomes_project 6 128216168 128219414 - MGP_NODShiLtJ_P0079031 Ghrl protein_coding protein_coding MGP_NODShiLtJ_T0079032.1 MGP_NODShiLtJ_G0030943.1 mouse_genomes_project 6 128216246 128219396 - MGP_NODShiLtJ_P0079032 Ghrl protein_coding protein_coding MGP_NODShiLtJ_T0079033.1 MGP_NODShiLtJ_G0030943.1 mouse_genomes_project 6 128219143 128219421 - Ghrl protein_coding retained_intron MGP_NODShiLtJ_T0015547.1 MGP_NODShiLtJ_G0013655.1 mouse_genomes_project 6 168381522 168381972 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077039.1 MGP_NODShiLtJ_G0030506.1 mouse_genomes_project 6 53501638 53523335 + MGP_NODShiLtJ_P0077039 Zfp775 protein_coding protein_coding MGP_NODShiLtJ_T0077040.1 MGP_NODShiLtJ_G0030506.1 mouse_genomes_project 6 53505207 53519897 + MGP_NODShiLtJ_P0077040 Zfp775 protein_coding protein_coding MGP_NODShiLtJ_T0077041.1 MGP_NODShiLtJ_G0030506.1 mouse_genomes_project 6 53513344 53523335 + MGP_NODShiLtJ_P0077041 Zfp775 protein_coding protein_coding MGP_NODShiLtJ_T0015418.1 MGP_NODShiLtJ_G0013526.1 mouse_genomes_project 6 127826365 127828850 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075831.1 MGP_NODShiLtJ_G0030236.1 mouse_genomes_project 6 1546120 1592413 + MGP_NODShiLtJ_P0075831 Casd1 protein_coding protein_coding MGP_NODShiLtJ_T0075832.1 MGP_NODShiLtJ_G0030236.1 mouse_genomes_project 6 1580211 1590040 + MGP_NODShiLtJ_P0075832 Casd1 protein_coding protein_coding MGP_NODShiLtJ_T0077823.1 MGP_NODShiLtJ_G0030709.1 mouse_genomes_project 6 92840368 92884794 + MGP_NODShiLtJ_P0077823 Gcfc2 protein_coding protein_coding MGP_NODShiLtJ_T0077824.1 MGP_NODShiLtJ_G0030709.1 mouse_genomes_project 6 92840372 92884135 + MGP_NODShiLtJ_P0077824 Gcfc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077825.1 MGP_NODShiLtJ_G0030709.1 mouse_genomes_project 6 92840379 92866271 + Gcfc2 protein_coding retained_intron MGP_NODShiLtJ_T0077826.1 MGP_NODShiLtJ_G0030709.1 mouse_genomes_project 6 92850943 92851408 + Gcfc2 protein_coding retained_intron MGP_NODShiLtJ_T0077827.1 MGP_NODShiLtJ_G0030709.1 mouse_genomes_project 6 92854295 92855723 + Gcfc2 protein_coding retained_intron MGP_NODShiLtJ_T0077828.1 MGP_NODShiLtJ_G0030709.1 mouse_genomes_project 6 92863442 92865812 + Gcfc2 protein_coding retained_intron MGP_NODShiLtJ_T0077829.1 MGP_NODShiLtJ_G0030709.1 mouse_genomes_project 6 92870096 92882939 + MGP_NODShiLtJ_P0077829 Gcfc2 protein_coding protein_coding MGP_NODShiLtJ_T0077830.1 MGP_NODShiLtJ_G0030709.1 mouse_genomes_project 6 92873259 92881826 + Gcfc2 protein_coding retained_intron MGP_NODShiLtJ_T0080754.1 MGP_NODShiLtJ_G0031318.1 mouse_genomes_project 6 167832945 167864573 - MGP_NODShiLtJ_P0080754 Fam60a protein_coding protein_coding MGP_NODShiLtJ_T0080755.1 MGP_NODShiLtJ_G0031318.1 mouse_genomes_project 6 167834843 167865850 - MGP_NODShiLtJ_P0080755 Fam60a protein_coding protein_coding MGP_NODShiLtJ_T0080756.1 MGP_NODShiLtJ_G0031318.1 mouse_genomes_project 6 167835134 167868590 - MGP_NODShiLtJ_P0080756 Fam60a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080757.1 MGP_NODShiLtJ_G0031318.1 mouse_genomes_project 6 167843208 167865761 - MGP_NODShiLtJ_P0080757 Fam60a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080758.1 MGP_NODShiLtJ_G0031318.1 mouse_genomes_project 6 167843212 167868335 - MGP_NODShiLtJ_P0080758 Fam60a protein_coding protein_coding MGP_NODShiLtJ_T0080759.1 MGP_NODShiLtJ_G0031318.1 mouse_genomes_project 6 167845741 167868536 - MGP_NODShiLtJ_P0080759 Fam60a protein_coding protein_coding MGP_NODShiLtJ_T0080760.1 MGP_NODShiLtJ_G0031318.1 mouse_genomes_project 6 167849003 167868595 - MGP_NODShiLtJ_P0080760 Fam60a protein_coding protein_coding MGP_NODShiLtJ_T0080761.1 MGP_NODShiLtJ_G0031318.1 mouse_genomes_project 6 167865427 167868623 - Fam60a protein_coding processed_transcript MGP_NODShiLtJ_T0079574.1 MGP_NODShiLtJ_G0031042.1 mouse_genomes_project 6 138409664 138424278 + MGP_NODShiLtJ_P0079574 Clec4a3 protein_coding protein_coding MGP_NODShiLtJ_T0079575.1 MGP_NODShiLtJ_G0031042.1 mouse_genomes_project 6 138409793 138424277 + MGP_NODShiLtJ_P0079575 Clec4a3 protein_coding protein_coding MGP_NODShiLtJ_T0079576.1 MGP_NODShiLtJ_G0031042.1 mouse_genomes_project 6 138409927 138421398 + MGP_NODShiLtJ_P0079576 Clec4a3 protein_coding protein_coding MGP_NODShiLtJ_T0010648.1 MGP_NODShiLtJ_G0008781.1 mouse_genomes_project 6 31534329 31534472 - Gm44354 miRNA miRNA MGP_NODShiLtJ_T0008490.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 38978876 39173763 - lincRNA lincRNA MGP_NODShiLtJ_T0008491.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 38981243 39049368 - lincRNA lincRNA MGP_NODShiLtJ_T0008492.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 39043402 39174004 - lincRNA lincRNA MGP_NODShiLtJ_T0008493.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 39114342 39174146 - lincRNA lincRNA MGP_NODShiLtJ_T0008494.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 39173290 39174200 - lincRNA lincRNA MGP_NODShiLtJ_T0008495.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 39173292 39176103 - lincRNA lincRNA MGP_NODShiLtJ_T0008496.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 39173299 39174829 - lincRNA lincRNA MGP_NODShiLtJ_T0008497.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 39173577 39175339 - lincRNA lincRNA MGP_NODShiLtJ_T0008498.1 MGP_NODShiLtJ_G0006862.1 mouse_genomes_project 6 39173651 39174970 - lincRNA lincRNA MGP_NODShiLtJ_T0015437.1 MGP_NODShiLtJ_G0013545.1 mouse_genomes_project 6 132611205 132611778 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079340.1 MGP_NODShiLtJ_G0030998.1 mouse_genomes_project 6 134244107 134313534 - MGP_NODShiLtJ_P0079340 Adipor2 protein_coding protein_coding MGP_NODShiLtJ_T0079341.1 MGP_NODShiLtJ_G0030998.1 mouse_genomes_project 6 134244722 134280911 - MGP_NODShiLtJ_P0079341 Adipor2 protein_coding protein_coding MGP_NODShiLtJ_T0079342.1 MGP_NODShiLtJ_G0030998.1 mouse_genomes_project 6 134246422 134282473 - MGP_NODShiLtJ_P0079342 Adipor2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079343.1 MGP_NODShiLtJ_G0030998.1 mouse_genomes_project 6 134248644 134313520 - Adipor2 protein_coding retained_intron MGP_NODShiLtJ_T0079344.1 MGP_NODShiLtJ_G0030998.1 mouse_genomes_project 6 134262366 134313305 - MGP_NODShiLtJ_P0079344 Adipor2 protein_coding protein_coding MGP_NODShiLtJ_T0002685.1 MGP_NODShiLtJ_G0002558.1 mouse_genomes_project 6 44435227 44435517 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0015304.1 MGP_NODShiLtJ_G0013412.1 mouse_genomes_project 6 76543501 76544159 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008685.1 MGP_NODShiLtJ_G0007009.1 mouse_genomes_project 6 160266212 160279586 + lincRNA lincRNA MGP_NODShiLtJ_T0079903.1 MGP_NODShiLtJ_G0031110.1 mouse_genomes_project 6 142597554 142601953 - MGP_NODShiLtJ_P0079903 Kcna1 protein_coding protein_coding MGP_NODShiLtJ_T0079904.1 MGP_NODShiLtJ_G0031110.1 mouse_genomes_project 6 142598821 142601970 - MGP_NODShiLtJ_P0079904 Kcna1 protein_coding protein_coding MGP_NODShiLtJ_T0079905.1 MGP_NODShiLtJ_G0031110.1 mouse_genomes_project 6 142600931 142603542 - Kcna1 protein_coding processed_transcript MGP_NODShiLtJ_T0015373.1 MGP_NODShiLtJ_G0013481.1 mouse_genomes_project 6 106781792 106782227 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008635.1 MGP_NODShiLtJ_G0006972.1 mouse_genomes_project 6 132341209 132353850 + Gm9946 lincRNA lincRNA MGP_NODShiLtJ_T0008636.1 MGP_NODShiLtJ_G0006972.1 mouse_genomes_project 6 132341209 132349706 + Gm9946 lincRNA lincRNA MGP_NODShiLtJ_T0008637.1 MGP_NODShiLtJ_G0006972.1 mouse_genomes_project 6 132349184 132349568 + Gm9946 lincRNA lincRNA MGP_NODShiLtJ_T0015194.1 MGP_NODShiLtJ_G0013302.1 mouse_genomes_project 6 46043550 46044348 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078765.1 MGP_NODShiLtJ_G0030896.1 mouse_genomes_project 6 113628311 113873555 - MGP_NODShiLtJ_P0078765 Pdzrn3 protein_coding protein_coding MGP_NODShiLtJ_T0078766.1 MGP_NODShiLtJ_G0030896.1 mouse_genomes_project 6 113640022 113849924 - Pdzrn3 protein_coding processed_transcript MGP_NODShiLtJ_T0078767.1 MGP_NODShiLtJ_G0030896.1 mouse_genomes_project 6 113654169 113683519 - Pdzrn3 protein_coding retained_intron MGP_NODShiLtJ_T0078768.1 MGP_NODShiLtJ_G0030896.1 mouse_genomes_project 6 113664191 113873000 - Pdzrn3 protein_coding processed_transcript MGP_NODShiLtJ_T0001962.1 MGP_NODShiLtJ_G0001874.1 mouse_genomes_project 6 80358384 80361563 - TEC TEC MGP_NODShiLtJ_T0000203.1 MGP_NODShiLtJ_G0000147.1 mouse_genomes_project 6 78708136 78708861 - MGP_NODShiLtJ_P0000203 Igkv1-35 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000204.1 MGP_NODShiLtJ_G0000147.1 mouse_genomes_project 6 78708136 78708861 - MGP_NODShiLtJ_P0000204 Igkv1-35 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0076762.1 MGP_NODShiLtJ_G0030416.1 mouse_genomes_project 6 43732035 43745319 + MGP_NODShiLtJ_P0076762 Ssbp1 protein_coding protein_coding MGP_NODShiLtJ_T0076763.1 MGP_NODShiLtJ_G0030416.1 mouse_genomes_project 6 43732098 43739277 + MGP_NODShiLtJ_P0076763 Ssbp1 protein_coding protein_coding MGP_NODShiLtJ_T0076764.1 MGP_NODShiLtJ_G0030416.1 mouse_genomes_project 6 43732136 43734973 + Ssbp1 protein_coding retained_intron MGP_NODShiLtJ_T0076765.1 MGP_NODShiLtJ_G0030416.1 mouse_genomes_project 6 43732151 43741614 + MGP_NODShiLtJ_P0076765 Ssbp1 protein_coding protein_coding MGP_NODShiLtJ_T0076766.1 MGP_NODShiLtJ_G0030416.1 mouse_genomes_project 6 43732158 43741611 + MGP_NODShiLtJ_P0076766 Ssbp1 protein_coding protein_coding MGP_NODShiLtJ_T0076767.1 MGP_NODShiLtJ_G0030416.1 mouse_genomes_project 6 43732209 43737195 + MGP_NODShiLtJ_P0076767 Ssbp1 protein_coding protein_coding MGP_NODShiLtJ_T0076768.1 MGP_NODShiLtJ_G0030416.1 mouse_genomes_project 6 43737162 43738140 + Ssbp1 protein_coding retained_intron MGP_NODShiLtJ_T0001897.1 MGP_NODShiLtJ_G0001809.1 mouse_genomes_project 6 30633753 30636668 + TEC TEC MGP_NODShiLtJ_T0080449.1 MGP_NODShiLtJ_G0031262.1 mouse_genomes_project 6 158987060 159020092 + MGP_NODShiLtJ_P0080449 Gm11077 protein_coding protein_coding MGP_NODShiLtJ_T0100716.1 MGP_NODShiLtJ_G0039110.1 mouse_genomes_project 6 140488535 140488804 + Gm23547 snoRNA snoRNA MGP_NODShiLtJ_T0077527.1 MGP_NODShiLtJ_G0030639.1 mouse_genomes_project 6 73721622 73899176 + MGP_NODShiLtJ_P0077527 Prdm5 protein_coding protein_coding MGP_NODShiLtJ_T0077528.1 MGP_NODShiLtJ_G0030639.1 mouse_genomes_project 6 73721656 73784935 + Prdm5 protein_coding retained_intron MGP_NODShiLtJ_T0077529.1 MGP_NODShiLtJ_G0030639.1 mouse_genomes_project 6 73721656 73899173 + MGP_NODShiLtJ_P0077529 Prdm5 protein_coding protein_coding MGP_NODShiLtJ_T0077530.1 MGP_NODShiLtJ_G0030639.1 mouse_genomes_project 6 73721659 73899098 + MGP_NODShiLtJ_P0077530 Prdm5 protein_coding protein_coding MGP_NODShiLtJ_T0077531.1 MGP_NODShiLtJ_G0030639.1 mouse_genomes_project 6 73721728 73727155 + Prdm5 protein_coding retained_intron MGP_NODShiLtJ_T0077532.1 MGP_NODShiLtJ_G0030639.1 mouse_genomes_project 6 73721795 73898934 + MGP_NODShiLtJ_P0077532 Prdm5 protein_coding protein_coding MGP_NODShiLtJ_T0077533.1 MGP_NODShiLtJ_G0030639.1 mouse_genomes_project 6 73897890 73899810 + Prdm5 protein_coding retained_intron MGP_NODShiLtJ_T0077831.1 MGP_NODShiLtJ_G0030710.1 mouse_genomes_project 6 92882727 92892384 - MGP_NODShiLtJ_P0077831 Mrpl19 protein_coding protein_coding MGP_NODShiLtJ_T0077832.1 MGP_NODShiLtJ_G0030710.1 mouse_genomes_project 6 92888374 92889248 - Mrpl19 protein_coding retained_intron MGP_NODShiLtJ_T0077833.1 MGP_NODShiLtJ_G0030710.1 mouse_genomes_project 6 92888811 92892033 - Mrpl19 protein_coding processed_transcript MGP_NODShiLtJ_T0015140.1 MGP_NODShiLtJ_G0013248.1 mouse_genomes_project 6 15180759 15181033 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099429.1 MGP_NODShiLtJ_G0037823.1 mouse_genomes_project 6 58741903 58742067 + Gm25818 snRNA snRNA MGP_NODShiLtJ_T0015394.1 MGP_NODShiLtJ_G0013502.1 mouse_genomes_project 6 116159335 116159771 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078917.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127776300 127795871 + MGP_NODShiLtJ_P0078917 Brpf1 protein_coding protein_coding MGP_NODShiLtJ_T0078918.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127776329 127795708 + MGP_NODShiLtJ_P0078918 Brpf1 protein_coding protein_coding MGP_NODShiLtJ_T0078919.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127776355 127795874 + MGP_NODShiLtJ_P0078919 Brpf1 protein_coding protein_coding MGP_NODShiLtJ_T0078920.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127776355 127795727 + MGP_NODShiLtJ_P0078920 Brpf1 protein_coding protein_coding MGP_NODShiLtJ_T0078921.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127776387 127795855 + MGP_NODShiLtJ_P0078921 Brpf1 protein_coding protein_coding MGP_NODShiLtJ_T0078922.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127776476 127795629 + MGP_NODShiLtJ_P0078922 Brpf1 protein_coding protein_coding MGP_NODShiLtJ_T0078923.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127777645 127795730 + MGP_NODShiLtJ_P0078923 Brpf1 protein_coding protein_coding MGP_NODShiLtJ_T0078924.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127788166 127789462 + Brpf1 protein_coding retained_intron MGP_NODShiLtJ_T0078925.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127791387 127793312 + Brpf1 protein_coding retained_intron MGP_NODShiLtJ_T0078926.1 MGP_NODShiLtJ_G0030923.1 mouse_genomes_project 6 127791545 127795708 + Brpf1 protein_coding retained_intron MGP_NODShiLtJ_T0079829.1 MGP_NODShiLtJ_G0031094.1 mouse_genomes_project 6 140965164 140968357 - Gapdh protein_coding retained_intron MGP_NODShiLtJ_T0079830.1 MGP_NODShiLtJ_G0031094.1 mouse_genomes_project 6 140965294 140968959 - MGP_NODShiLtJ_P0079830 Gapdh protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079831.1 MGP_NODShiLtJ_G0031094.1 mouse_genomes_project 6 140966699 140968957 - Gapdh protein_coding processed_transcript MGP_NODShiLtJ_T0079832.1 MGP_NODShiLtJ_G0031094.1 mouse_genomes_project 6 140967950 140968959 - Gapdh protein_coding retained_intron MGP_NODShiLtJ_T0000300.1 MGP_NODShiLtJ_G0000238.1 mouse_genomes_project 6 77227528 77227935 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0011538.1 MGP_NODShiLtJ_G0009671.1 mouse_genomes_project 6 57453689 57453922 + Gm27817 misc_RNA misc_RNA MGP_NODShiLtJ_T0079729.1 MGP_NODShiLtJ_G0031079.1 mouse_genomes_project 6 140623124 140639647 - MGP_NODShiLtJ_P0079729 P3h3 protein_coding protein_coding MGP_NODShiLtJ_T0079730.1 MGP_NODShiLtJ_G0031079.1 mouse_genomes_project 6 140623241 140639624 - MGP_NODShiLtJ_P0079730 P3h3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079731.1 MGP_NODShiLtJ_G0031079.1 mouse_genomes_project 6 140623529 140624647 - P3h3 protein_coding retained_intron MGP_NODShiLtJ_T0079732.1 MGP_NODShiLtJ_G0031079.1 mouse_genomes_project 6 140627360 140632892 - P3h3 protein_coding retained_intron MGP_NODShiLtJ_T0079733.1 MGP_NODShiLtJ_G0031079.1 mouse_genomes_project 6 140628008 140636819 - P3h3 protein_coding retained_intron MGP_NODShiLtJ_T0079734.1 MGP_NODShiLtJ_G0031079.1 mouse_genomes_project 6 140628050 140636722 - P3h3 protein_coding retained_intron MGP_NODShiLtJ_T0079735.1 MGP_NODShiLtJ_G0031079.1 mouse_genomes_project 6 140636290 140637065 - P3h3 protein_coding retained_intron MGP_NODShiLtJ_T0076879.1 MGP_NODShiLtJ_G0030462.1 mouse_genomes_project 6 46063130 46064084 - MGP_NODShiLtJ_P0076879 Olfr455 protein_coding protein_coding MGP_NODShiLtJ_T0001894.1 MGP_NODShiLtJ_G0001806.1 mouse_genomes_project 6 30238974 30245978 - TEC TEC MGP_NODShiLtJ_T0080253.1 MGP_NODShiLtJ_G0031225.1 mouse_genomes_project 6 152587263 152599281 - MGP_NODShiLtJ_P0080253 Gprc5d protein_coding protein_coding MGP_NODShiLtJ_T0080254.1 MGP_NODShiLtJ_G0031225.1 mouse_genomes_project 6 152587263 152599244 - MGP_NODShiLtJ_P0080254 Gprc5d protein_coding protein_coding MGP_NODShiLtJ_T0079790.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140831509 140843534 + MGP_NODShiLtJ_P0079790 Ing4 protein_coding protein_coding MGP_NODShiLtJ_T0079791.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140831585 140840711 + Ing4 protein_coding retained_intron MGP_NODShiLtJ_T0079792.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140831585 140843796 + MGP_NODShiLtJ_P0079792 Ing4 protein_coding protein_coding MGP_NODShiLtJ_T0079793.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140831597 140842104 + Ing4 protein_coding retained_intron MGP_NODShiLtJ_T0079794.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140831610 140843340 + Ing4 protein_coding retained_intron MGP_NODShiLtJ_T0079795.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140831610 140843797 + MGP_NODShiLtJ_P0079795 Ing4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079796.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140838578 140842538 + Ing4 protein_coding retained_intron MGP_NODShiLtJ_T0079797.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140840047 140843797 + Ing4 protein_coding retained_intron MGP_NODShiLtJ_T0079798.1 MGP_NODShiLtJ_G0031088.1 mouse_genomes_project 6 140842171 140843150 + Ing4 protein_coding retained_intron MGP_NODShiLtJ_T0004933.1 MGP_NODShiLtJ_G0004225.1 mouse_genomes_project 6 94142397 94144280 + Gm44287 antisense antisense MGP_NODShiLtJ_T0076857.1 MGP_NODShiLtJ_G0030453.1 mouse_genomes_project 6 45826326 45835651 - MGP_NODShiLtJ_P0076857 Fam131b protein_coding protein_coding MGP_NODShiLtJ_T0076858.1 MGP_NODShiLtJ_G0030453.1 mouse_genomes_project 6 45829173 45835480 - MGP_NODShiLtJ_P0076858 Fam131b protein_coding protein_coding MGP_NODShiLtJ_T0002104.1 MGP_NODShiLtJ_G0002016.1 mouse_genomes_project 6 144479610 144481265 + TEC TEC MGP_NODShiLtJ_T0001915.1 MGP_NODShiLtJ_G0001827.1 mouse_genomes_project 6 45162258 45165805 - TEC TEC MGP_NODShiLtJ_T0077207.1 MGP_NODShiLtJ_G0030547.1 mouse_genomes_project 6 57394924 57397007 - MGP_NODShiLtJ_P0077207 Hoxa4 protein_coding protein_coding MGP_NODShiLtJ_T0018159.1 MGP_NODShiLtJ_G0015515.1 mouse_genomes_project 6 141337318 141355022 + Gm26728 processed_transcript antisense MGP_NODShiLtJ_T0018160.1 MGP_NODShiLtJ_G0015515.1 mouse_genomes_project 6 141337322 141338857 + Gm26728 processed_transcript retained_intron MGP_NODShiLtJ_T0018161.1 MGP_NODShiLtJ_G0015515.1 mouse_genomes_project 6 141337324 141344407 + Gm26728 processed_transcript antisense MGP_NODShiLtJ_T0005018.1 MGP_NODShiLtJ_G0004278.1 mouse_genomes_project 6 136064916 136099868 + Gm43915 antisense antisense MGP_NODShiLtJ_T0076976.1 MGP_NODShiLtJ_G0030494.1 mouse_genomes_project 6 52850441 52876362 - MGP_NODShiLtJ_P0076976 Zfp777 protein_coding protein_coding MGP_NODShiLtJ_T0076977.1 MGP_NODShiLtJ_G0030494.1 mouse_genomes_project 6 52850458 52878149 - MGP_NODShiLtJ_P0076977 Zfp777 protein_coding protein_coding MGP_NODShiLtJ_T0076978.1 MGP_NODShiLtJ_G0030494.1 mouse_genomes_project 6 52855628 52872494 - MGP_NODShiLtJ_P0076978 Zfp777 protein_coding protein_coding MGP_NODShiLtJ_T0076979.1 MGP_NODShiLtJ_G0030494.1 mouse_genomes_project 6 52872413 52876362 - MGP_NODShiLtJ_P0076979 Zfp777 protein_coding protein_coding MGP_NODShiLtJ_T0076980.1 MGP_NODShiLtJ_G0030494.1 mouse_genomes_project 6 52872695 52876042 - MGP_NODShiLtJ_P0076980 Zfp777 protein_coding protein_coding MGP_NODShiLtJ_T0008657.1 MGP_NODShiLtJ_G0006992.1 mouse_genomes_project 6 144259093 144274936 - 9330102E08Rik lincRNA lincRNA MGP_NODShiLtJ_T0001967.1 MGP_NODShiLtJ_G0001879.1 mouse_genomes_project 6 81354908 81356472 + TEC TEC MGP_NODShiLtJ_T0001883.1 MGP_NODShiLtJ_G0001795.1 mouse_genomes_project 6 14869309 14871000 + TEC TEC MGP_NODShiLtJ_T0100677.1 MGP_NODShiLtJ_G0039071.1 mouse_genomes_project 6 76068813 76068951 - Gm22425 snoRNA snoRNA MGP_NODShiLtJ_T0008639.1 MGP_NODShiLtJ_G0006974.1 mouse_genomes_project 6 132419382 132512738 - lincRNA lincRNA MGP_NODShiLtJ_T0077375.1 MGP_NODShiLtJ_G0030585.1 mouse_genomes_project 6 62316789 62338792 - MGP_NODShiLtJ_P0077375 Kbtbd2 protein_coding protein_coding MGP_NODShiLtJ_T0077376.1 MGP_NODShiLtJ_G0030585.1 mouse_genomes_project 6 62316790 62338869 - MGP_NODShiLtJ_P0077376 Kbtbd2 protein_coding protein_coding MGP_NODShiLtJ_T0077377.1 MGP_NODShiLtJ_G0030585.1 mouse_genomes_project 6 62329495 62338335 - MGP_NODShiLtJ_P0077377 Kbtbd2 protein_coding protein_coding MGP_NODShiLtJ_T0077378.1 MGP_NODShiLtJ_G0030585.1 mouse_genomes_project 6 62329640 62336865 - Kbtbd2 protein_coding processed_transcript MGP_NODShiLtJ_T0008649.1 MGP_NODShiLtJ_G0006984.1 mouse_genomes_project 6 140063243 140064446 - 1700027F06Rik lincRNA lincRNA MGP_NODShiLtJ_T0101991.1 MGP_NODShiLtJ_G0040159.1 mouse_genomes_project 6 46744091 46744407 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002082.1 MGP_NODShiLtJ_G0001994.1 mouse_genomes_project 6 130901888 130905546 - TEC TEC MGP_NODShiLtJ_T0099415.1 MGP_NODShiLtJ_G0037809.1 mouse_genomes_project 6 19482848 19482955 + Gm22828 snRNA snRNA MGP_NODShiLtJ_T0002139.1 MGP_NODShiLtJ_G0002051.1 mouse_genomes_project 6 167045284 167048763 + TEC TEC MGP_NODShiLtJ_T0011725.1 MGP_NODShiLtJ_G0009835.1 mouse_genomes_project 6 145853071 145870865 - MGP_NODShiLtJ_P0011725 Clec7a polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011726.1 MGP_NODShiLtJ_G0009835.1 mouse_genomes_project 6 145853071 145870870 - MGP_NODShiLtJ_P0011726 Clec7a polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0011727.1 MGP_NODShiLtJ_G0009835.1 mouse_genomes_project 6 145861026 145870872 - Clec7a polymorphic_pseudogene retained_intron MGP_NODShiLtJ_T0005053.1 MGP_NODShiLtJ_G0004309.1 mouse_genomes_project 6 156296555 156302459 + A830011K09Rik antisense antisense MGP_NODShiLtJ_T0005054.1 MGP_NODShiLtJ_G0004309.1 mouse_genomes_project 6 156296650 156301168 + A830011K09Rik antisense antisense MGP_NODShiLtJ_T0005055.1 MGP_NODShiLtJ_G0004309.1 mouse_genomes_project 6 156296721 156303092 + A830011K09Rik antisense antisense MGP_NODShiLtJ_T0010679.1 MGP_NODShiLtJ_G0008812.1 mouse_genomes_project 6 99561528 99561659 - Mir6376 miRNA miRNA MGP_NODShiLtJ_T0004845.1 MGP_NODShiLtJ_G0004160.1 mouse_genomes_project 6 5666130 5684480 - antisense antisense MGP_NODShiLtJ_T0079498.1 MGP_NODShiLtJ_G0031023.1 mouse_genomes_project 6 136496379 136602434 - MGP_NODShiLtJ_P0079498 Iqsec3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079499.1 MGP_NODShiLtJ_G0031023.1 mouse_genomes_project 6 136496379 136602392 - MGP_NODShiLtJ_P0079499 Iqsec3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079500.1 MGP_NODShiLtJ_G0031023.1 mouse_genomes_project 6 136496379 136602447 - MGP_NODShiLtJ_P0079500 Iqsec3 protein_coding protein_coding MGP_NODShiLtJ_T0079501.1 MGP_NODShiLtJ_G0031023.1 mouse_genomes_project 6 136530102 136602447 - MGP_NODShiLtJ_P0079501 Iqsec3 protein_coding protein_coding MGP_NODShiLtJ_T0010680.1 MGP_NODShiLtJ_G0008813.1 mouse_genomes_project 6 102259643 102259770 - Gm24816 miRNA miRNA MGP_NODShiLtJ_T0078628.1 MGP_NODShiLtJ_G0030868.1 mouse_genomes_project 6 104540408 104569877 + MGP_NODShiLtJ_P0078628 A730049H05Rik protein_coding protein_coding MGP_NODShiLtJ_T0078629.1 MGP_NODShiLtJ_G0030868.1 mouse_genomes_project 6 104551565 104574777 + A730049H05Rik protein_coding processed_transcript MGP_NODShiLtJ_T0076656.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41490732 41575411 + MGP_NODShiLtJ_P0076656 Ubn2 protein_coding protein_coding MGP_NODShiLtJ_T0076657.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41490955 41562674 + MGP_NODShiLtJ_P0076657 Ubn2 protein_coding protein_coding MGP_NODShiLtJ_T0076658.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41497307 41590086 + MGP_NODShiLtJ_P0076658 Ubn2 protein_coding protein_coding MGP_NODShiLtJ_T0076659.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41521489 41522269 + Ubn2 protein_coding retained_intron MGP_NODShiLtJ_T0076660.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41522427 41544904 + Ubn2 protein_coding retained_intron MGP_NODShiLtJ_T0076661.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41543196 41547557 + Ubn2 protein_coding retained_intron MGP_NODShiLtJ_T0076662.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41543294 41548441 + Ubn2 protein_coding processed_transcript MGP_NODShiLtJ_T0076663.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41544142 41562674 + Ubn2 protein_coding retained_intron MGP_NODShiLtJ_T0076664.1 MGP_NODShiLtJ_G0030394.1 mouse_genomes_project 6 41551100 41590120 + MGP_NODShiLtJ_P0076664 Ubn2 protein_coding protein_coding MGP_NODShiLtJ_T0078251.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98221742 98383469 + MGP_NODShiLtJ_P0078251 Aak1 protein_coding protein_coding MGP_NODShiLtJ_T0078252.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98221757 98309333 + MGP_NODShiLtJ_P0078252 Aak1 protein_coding protein_coding MGP_NODShiLtJ_T0078253.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98221853 98324631 + Aak1 protein_coding retained_intron MGP_NODShiLtJ_T0078254.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98222278 98372095 + MGP_NODShiLtJ_P0078254 Aak1 protein_coding protein_coding MGP_NODShiLtJ_T0078255.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98223410 98309328 + Aak1 protein_coding processed_transcript MGP_NODShiLtJ_T0078256.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98335390 98376127 + MGP_NODShiLtJ_P0078256 Aak1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078257.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98345177 98376450 + Aak1 protein_coding processed_transcript MGP_NODShiLtJ_T0078258.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98365495 98368260 + Aak1 protein_coding retained_intron MGP_NODShiLtJ_T0078259.1 MGP_NODShiLtJ_G0030789.1 mouse_genomes_project 6 98375241 98376906 + Aak1 protein_coding processed_transcript MGP_NODShiLtJ_T0002089.1 MGP_NODShiLtJ_G0002001.1 mouse_genomes_project 6 136015487 136017577 - TEC TEC MGP_NODShiLtJ_T0001995.1 MGP_NODShiLtJ_G0001907.1 mouse_genomes_project 6 93255306 93259446 - TEC TEC MGP_NODShiLtJ_T0018153.1 MGP_NODShiLtJ_G0015513.1 mouse_genomes_project 6 140831565 140846076 + Gm44597 processed_transcript retained_intron MGP_NODShiLtJ_T0018154.1 MGP_NODShiLtJ_G0015513.1 mouse_genomes_project 6 140831594 140846031 + Gm44597 processed_transcript retained_intron MGP_NODShiLtJ_T0015232.1 MGP_NODShiLtJ_G0013340.1 mouse_genomes_project 6 57567214 57567416 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005060.1 MGP_NODShiLtJ_G0004314.1 mouse_genomes_project 6 161746823 161771782 - 1700126G02Rik antisense antisense MGP_NODShiLtJ_T0077046.1 MGP_NODShiLtJ_G0030508.1 mouse_genomes_project 6 53547329 53559812 + MGP_NODShiLtJ_P0077046 Gimap8 protein_coding protein_coding MGP_NODShiLtJ_T0077047.1 MGP_NODShiLtJ_G0030508.1 mouse_genomes_project 6 53547479 53560044 + MGP_NODShiLtJ_P0077047 Gimap8 protein_coding protein_coding MGP_NODShiLtJ_T0000187.1 MGP_NODShiLtJ_G0000136.1 mouse_genomes_project 6 77382761 77383324 - MGP_NODShiLtJ_P0000187 Igkv4-86 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000189.1 MGP_NODShiLtJ_G0000136.1 mouse_genomes_project 6 77382761 77383289 - MGP_NODShiLtJ_P0000189 Igkv4-86 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0101990.1 MGP_NODShiLtJ_G0040158.1 mouse_genomes_project 6 46739145 46740048 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010713.1 MGP_NODShiLtJ_G0008846.1 mouse_genomes_project 6 153262970 153263075 + Gm22892 miRNA miRNA MGP_NODShiLtJ_T0008683.1 MGP_NODShiLtJ_G0007008.1 mouse_genomes_project 6 159247062 159340108 + Gm30524 lincRNA lincRNA MGP_NODShiLtJ_T0008684.1 MGP_NODShiLtJ_G0007008.1 mouse_genomes_project 6 159247088 159338408 + Gm30524 lincRNA lincRNA MGP_NODShiLtJ_T0100720.1 MGP_NODShiLtJ_G0039114.1 mouse_genomes_project 6 152628881 152629015 + Gm22881 snoRNA snoRNA MGP_NODShiLtJ_T0015435.1 MGP_NODShiLtJ_G0013543.1 mouse_genomes_project 6 131964408 131964785 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078234.1 MGP_NODShiLtJ_G0030786.1 mouse_genomes_project 6 98032388 98042856 - MGP_NODShiLtJ_P0078234 Snrnp27 protein_coding protein_coding MGP_NODShiLtJ_T0078235.1 MGP_NODShiLtJ_G0030786.1 mouse_genomes_project 6 98032642 98042825 - Snrnp27 protein_coding processed_transcript MGP_NODShiLtJ_T0078236.1 MGP_NODShiLtJ_G0030786.1 mouse_genomes_project 6 98032909 98042856 - MGP_NODShiLtJ_P0078236 Snrnp27 protein_coding protein_coding MGP_NODShiLtJ_T0078237.1 MGP_NODShiLtJ_G0030786.1 mouse_genomes_project 6 98041010 98042851 - Snrnp27 protein_coding processed_transcript MGP_NODShiLtJ_T0015268.1 MGP_NODShiLtJ_G0013376.1 mouse_genomes_project 6 73032108 73032540 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077539.1 MGP_NODShiLtJ_G0030642.1 mouse_genomes_project 6 74599532 74607454 - MGP_NODShiLtJ_P0077539 Vmn1r32 protein_coding protein_coding MGP_NODShiLtJ_T0077985.1 MGP_NODShiLtJ_G0030740.1 mouse_genomes_project 6 94526389 94553077 - MGP_NODShiLtJ_P0077985 Dguok protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077986.1 MGP_NODShiLtJ_G0030740.1 mouse_genomes_project 6 94526479 94553055 - MGP_NODShiLtJ_P0077986 Dguok protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077987.1 MGP_NODShiLtJ_G0030740.1 mouse_genomes_project 6 94526580 94553123 - MGP_NODShiLtJ_P0077987 Dguok protein_coding protein_coding MGP_NODShiLtJ_T0077988.1 MGP_NODShiLtJ_G0030740.1 mouse_genomes_project 6 94527035 94539764 - Dguok protein_coding processed_transcript MGP_NODShiLtJ_T0077989.1 MGP_NODShiLtJ_G0030740.1 mouse_genomes_project 6 94527383 94533155 - Dguok protein_coding processed_transcript MGP_NODShiLtJ_T0077990.1 MGP_NODShiLtJ_G0030740.1 mouse_genomes_project 6 94534123 94536563 - Dguok protein_coding retained_intron MGP_NODShiLtJ_T0077991.1 MGP_NODShiLtJ_G0030740.1 mouse_genomes_project 6 94536350 94553141 - Dguok protein_coding retained_intron MGP_NODShiLtJ_T0015138.1 MGP_NODShiLtJ_G0013246.1 mouse_genomes_project 6 12708151 12708456 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015408.1 MGP_NODShiLtJ_G0013516.1 mouse_genomes_project 6 123272979 123273427 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076213.1 MGP_NODShiLtJ_G0030316.1 mouse_genomes_project 6 30470010 30473114 + MGP_NODShiLtJ_P0076213 Arf5 protein_coding protein_coding MGP_NODShiLtJ_T0076214.1 MGP_NODShiLtJ_G0030316.1 mouse_genomes_project 6 30470040 30472858 + MGP_NODShiLtJ_P0076214 Arf5 protein_coding protein_coding MGP_NODShiLtJ_T0076215.1 MGP_NODShiLtJ_G0030316.1 mouse_genomes_project 6 30470159 30471139 + Arf5 protein_coding retained_intron MGP_NODShiLtJ_T0078154.1 MGP_NODShiLtJ_G0030773.1 mouse_genomes_project 6 97236138 97259732 - MGP_NODShiLtJ_P0078154 Dusp11 protein_coding protein_coding MGP_NODShiLtJ_T0078155.1 MGP_NODShiLtJ_G0030773.1 mouse_genomes_project 6 97241618 97253474 - MGP_NODShiLtJ_P0078155 Dusp11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078156.1 MGP_NODShiLtJ_G0030773.1 mouse_genomes_project 6 97243906 97245080 - Dusp11 protein_coding retained_intron MGP_NODShiLtJ_T0078157.1 MGP_NODShiLtJ_G0030773.1 mouse_genomes_project 6 97243911 97248139 - Dusp11 protein_coding processed_transcript MGP_NODShiLtJ_T0078158.1 MGP_NODShiLtJ_G0030773.1 mouse_genomes_project 6 97244234 97248023 - Dusp11 protein_coding retained_intron MGP_NODShiLtJ_T0078159.1 MGP_NODShiLtJ_G0030773.1 mouse_genomes_project 6 97249158 97259732 - Dusp11 protein_coding processed_transcript MGP_NODShiLtJ_T0078160.1 MGP_NODShiLtJ_G0030773.1 mouse_genomes_project 6 97249260 97259672 - Dusp11 protein_coding processed_transcript MGP_NODShiLtJ_T0078161.1 MGP_NODShiLtJ_G0030773.1 mouse_genomes_project 6 97255590 97259707 - Dusp11 protein_coding retained_intron MGP_NODShiLtJ_T0080151.1 MGP_NODShiLtJ_G0031180.1 mouse_genomes_project 6 148242851 148256278 + MGP_NODShiLtJ_P0080151 protein_coding protein_coding MGP_NODShiLtJ_T0080152.1 MGP_NODShiLtJ_G0031180.1 mouse_genomes_project 6 148242851 148256284 + MGP_NODShiLtJ_P0080152 protein_coding protein_coding MGP_NODShiLtJ_T0077348.1 MGP_NODShiLtJ_G0030579.1 mouse_genomes_project 6 61119549 61122991 - MGP_NODShiLtJ_P0077348 Neurod6 protein_coding protein_coding MGP_NODShiLtJ_T0015393.1 MGP_NODShiLtJ_G0013501.1 mouse_genomes_project 6 116043124 116043277 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080415.1 MGP_NODShiLtJ_G0031257.1 mouse_genomes_project 6 158001473 158140872 + MGP_NODShiLtJ_P0080415 Pik3c2g protein_coding protein_coding MGP_NODShiLtJ_T0077263.1 MGP_NODShiLtJ_G0030560.1 mouse_genomes_project 6 59126139 59131510 - MGP_NODShiLtJ_P0077263 Tril protein_coding protein_coding MGP_NODShiLtJ_T0005072.1 MGP_NODShiLtJ_G0004325.1 mouse_genomes_project 6 165755574 165757221 - Gm44085 antisense antisense MGP_NODShiLtJ_T0077036.1 MGP_NODShiLtJ_G0030505.1 mouse_genomes_project 6 53493562 53513416 + Gm44965 protein_coding processed_transcript MGP_NODShiLtJ_T0077037.1 MGP_NODShiLtJ_G0030505.1 mouse_genomes_project 6 53493565 53519433 + MGP_NODShiLtJ_P0077037 Gm44965 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005058.1 MGP_NODShiLtJ_G0004312.1 mouse_genomes_project 6 159556108 159560412 - Gm28523 antisense antisense MGP_NODShiLtJ_T0004963.1 MGP_NODShiLtJ_G0004240.1 mouse_genomes_project 6 99156936 99158121 - Gm44210 antisense antisense MGP_NODShiLtJ_T0010655.1 MGP_NODShiLtJ_G0008788.1 mouse_genomes_project 6 33355162 33355233 - Mir29b-1 miRNA miRNA MGP_NODShiLtJ_T0080418.1 MGP_NODShiLtJ_G0031258.1 mouse_genomes_project 6 158162047 158215763 - MGP_NODShiLtJ_P0080418 Plcz1 protein_coding protein_coding MGP_NODShiLtJ_T0080419.1 MGP_NODShiLtJ_G0031258.1 mouse_genomes_project 6 158162096 158215737 - MGP_NODShiLtJ_P0080419 Plcz1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080420.1 MGP_NODShiLtJ_G0031258.1 mouse_genomes_project 6 158162098 158215718 - MGP_NODShiLtJ_P0080420 Plcz1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080421.1 MGP_NODShiLtJ_G0031258.1 mouse_genomes_project 6 158194290 158215718 - MGP_NODShiLtJ_P0080421 Plcz1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080178.1 MGP_NODShiLtJ_G0031204.1 mouse_genomes_project 6 150016370 150017300 + MGP_NODShiLtJ_P0080178 Tas2r113 protein_coding protein_coding MGP_NODShiLtJ_T0018121.1 MGP_NODShiLtJ_G0015500.1 mouse_genomes_project 6 63137842 63316119 + processed_transcript processed_transcript MGP_NODShiLtJ_T0000314.1 MGP_NODShiLtJ_G0000252.1 mouse_genomes_project 6 78487921 78488484 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0002049.1 MGP_NODShiLtJ_G0001961.1 mouse_genomes_project 6 106725996 106727000 + TEC TEC MGP_NODShiLtJ_T0000043.1 MGP_NODShiLtJ_G0000036.1 mouse_genomes_project 6 79450124 79450163 + MGP_NODShiLtJ_P0000043 Igkj2 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0000044.1 MGP_NODShiLtJ_G0000036.1 mouse_genomes_project 6 79450124 79450167 + Igkj2 IG_J_gene processed_transcript MGP_NODShiLtJ_T0011560.1 MGP_NODShiLtJ_G0009693.1 mouse_genomes_project 6 138026619 138026731 + Gm26168 misc_RNA misc_RNA MGP_NODShiLtJ_T0076084.1 MGP_NODShiLtJ_G0030283.1 mouse_genomes_project 6 17607110 17806730 + MGP_NODShiLtJ_P0076084 Cftr protein_coding protein_coding MGP_NODShiLtJ_T0076085.1 MGP_NODShiLtJ_G0030283.1 mouse_genomes_project 6 17607110 17806729 + MGP_NODShiLtJ_P0076085 Cftr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076086.1 MGP_NODShiLtJ_G0030283.1 mouse_genomes_project 6 17607110 17806729 + MGP_NODShiLtJ_P0076086 Cftr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076087.1 MGP_NODShiLtJ_G0030283.1 mouse_genomes_project 6 17607194 17705595 + MGP_NODShiLtJ_P0076087 Cftr protein_coding protein_coding MGP_NODShiLtJ_T0076088.1 MGP_NODShiLtJ_G0030283.1 mouse_genomes_project 6 17607247 17805000 + MGP_NODShiLtJ_P0076088 Cftr protein_coding protein_coding MGP_NODShiLtJ_T0076089.1 MGP_NODShiLtJ_G0030283.1 mouse_genomes_project 6 17735775 17745704 + Cftr protein_coding retained_intron MGP_NODShiLtJ_T0080285.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154067370 154142230 + MGP_NODShiLtJ_P0080285 Atf7ip protein_coding protein_coding MGP_NODShiLtJ_T0080286.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154084132 154187183 + MGP_NODShiLtJ_P0080286 Atf7ip protein_coding protein_coding MGP_NODShiLtJ_T0080287.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154084136 154137774 + MGP_NODShiLtJ_P0080287 Atf7ip protein_coding protein_coding MGP_NODShiLtJ_T0080288.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154084171 154159707 + MGP_NODShiLtJ_P0080288 Atf7ip protein_coding protein_coding MGP_NODShiLtJ_T0080289.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154084176 154090895 + Atf7ip protein_coding retained_intron MGP_NODShiLtJ_T0080290.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154099618 154163978 + MGP_NODShiLtJ_P0080290 Atf7ip protein_coding protein_coding MGP_NODShiLtJ_T0080291.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154124776 154133888 + MGP_NODShiLtJ_P0080291 Atf7ip protein_coding protein_coding MGP_NODShiLtJ_T0080292.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154127602 154134071 + MGP_NODShiLtJ_P0080292 Atf7ip protein_coding protein_coding MGP_NODShiLtJ_T0080293.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154127620 154128816 + Atf7ip protein_coding retained_intron MGP_NODShiLtJ_T0080294.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154134820 154146478 + MGP_NODShiLtJ_P0080294 Atf7ip protein_coding protein_coding MGP_NODShiLtJ_T0080295.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154153847 154159654 + Atf7ip protein_coding retained_intron MGP_NODShiLtJ_T0080296.1 MGP_NODShiLtJ_G0031233.1 mouse_genomes_project 6 154171875 154184524 + Atf7ip protein_coding retained_intron MGP_NODShiLtJ_T0010711.1 MGP_NODShiLtJ_G0008844.1 mouse_genomes_project 6 150431437 150431547 + Gm25019 miRNA miRNA MGP_NODShiLtJ_T0078601.1 MGP_NODShiLtJ_G0030861.1 mouse_genomes_project 6 103642904 103739819 + MGP_NODShiLtJ_P0078601 Fgd5 protein_coding protein_coding MGP_NODShiLtJ_T0078602.1 MGP_NODShiLtJ_G0030861.1 mouse_genomes_project 6 103731250 103739816 + Fgd5 protein_coding retained_intron MGP_NODShiLtJ_T0078603.1 MGP_NODShiLtJ_G0030861.1 mouse_genomes_project 6 103735009 103738030 + Fgd5 protein_coding retained_intron MGP_NODShiLtJ_T0015209.1 MGP_NODShiLtJ_G0013317.1 mouse_genomes_project 6 52674701 52675098 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015455.1 MGP_NODShiLtJ_G0013563.1 mouse_genomes_project 6 137953801 137954561 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080338.1 MGP_NODShiLtJ_G0031247.1 mouse_genomes_project 6 154976436 155118944 + Ptpro protein_coding retained_intron MGP_NODShiLtJ_T0080339.1 MGP_NODShiLtJ_G0031247.1 mouse_genomes_project 6 154976451 155208445 + MGP_NODShiLtJ_P0080339 Ptpro protein_coding protein_coding MGP_NODShiLtJ_T0080340.1 MGP_NODShiLtJ_G0031247.1 mouse_genomes_project 6 154976582 155208445 + MGP_NODShiLtJ_P0080340 Ptpro protein_coding protein_coding MGP_NODShiLtJ_T0080341.1 MGP_NODShiLtJ_G0031247.1 mouse_genomes_project 6 155154389 155208451 + MGP_NODShiLtJ_P0080341 Ptpro protein_coding protein_coding MGP_NODShiLtJ_T0080342.1 MGP_NODShiLtJ_G0031247.1 mouse_genomes_project 6 155154405 155208451 + MGP_NODShiLtJ_P0080342 Ptpro protein_coding protein_coding MGP_NODShiLtJ_T0080343.1 MGP_NODShiLtJ_G0031247.1 mouse_genomes_project 6 155154427 155159488 + Ptpro protein_coding retained_intron MGP_NODShiLtJ_T0080344.1 MGP_NODShiLtJ_G0031247.1 mouse_genomes_project 6 155198097 155207522 + Ptpro protein_coding processed_transcript MGP_NODShiLtJ_T0080345.1 MGP_NODShiLtJ_G0031247.1 mouse_genomes_project 6 155199236 155207840 + Ptpro protein_coding processed_transcript MGP_NODShiLtJ_T0015520.1 MGP_NODShiLtJ_G0013628.1 mouse_genomes_project 6 158207835 158208207 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079480.1 MGP_NODShiLtJ_G0031020.1 mouse_genomes_project 6 136362221 136388027 + MGP_NODShiLtJ_P0079480 Usp18 protein_coding protein_coding MGP_NODShiLtJ_T0079481.1 MGP_NODShiLtJ_G0031020.1 mouse_genomes_project 6 136370927 136372885 + Usp18 protein_coding retained_intron MGP_NODShiLtJ_T0079482.1 MGP_NODShiLtJ_G0031020.1 mouse_genomes_project 6 136378590 136380327 + Usp18 protein_coding retained_intron MGP_NODShiLtJ_T0079483.1 MGP_NODShiLtJ_G0031020.1 mouse_genomes_project 6 136385692 136386608 + MGP_NODShiLtJ_P0079483 Usp18 protein_coding protein_coding MGP_NODShiLtJ_T0015457.1 MGP_NODShiLtJ_G0013565.1 mouse_genomes_project 6 138585951 138586102 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077534.1 MGP_NODShiLtJ_G0030640.1 mouse_genomes_project 6 73916750 73918156 + MGP_NODShiLtJ_P0077534 4930544G11Rik protein_coding protein_coding MGP_NODShiLtJ_T0077640.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80679965 80727888 + MGP_NODShiLtJ_P0077640 Immt protein_coding protein_coding MGP_NODShiLtJ_T0077641.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80679983 80705684 + Immt protein_coding retained_intron MGP_NODShiLtJ_T0077642.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80679984 80711632 + MGP_NODShiLtJ_P0077642 Immt protein_coding protein_coding MGP_NODShiLtJ_T0077643.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80680014 80727884 + MGP_NODShiLtJ_P0077643 Immt protein_coding protein_coding MGP_NODShiLtJ_T0077644.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80680017 80727888 + MGP_NODShiLtJ_P0077644 Immt protein_coding protein_coding MGP_NODShiLtJ_T0077645.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80680022 80727877 + MGP_NODShiLtJ_P0077645 Immt protein_coding protein_coding MGP_NODShiLtJ_T0077646.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80680036 80730002 + MGP_NODShiLtJ_P0077646 Immt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077647.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80680063 80707457 + MGP_NODShiLtJ_P0077647 Immt protein_coding protein_coding MGP_NODShiLtJ_T0077648.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80714397 80718399 + Immt protein_coding retained_intron MGP_NODShiLtJ_T0077649.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80722638 80725707 + Immt protein_coding retained_intron MGP_NODShiLtJ_T0077650.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80723748 80727881 + Immt protein_coding retained_intron MGP_NODShiLtJ_T0077651.1 MGP_NODShiLtJ_G0030672.1 mouse_genomes_project 6 80724112 80727159 + MGP_NODShiLtJ_P0077651 Immt protein_coding protein_coding MGP_NODShiLtJ_T0008415.1 MGP_NODShiLtJ_G0006813.1 mouse_genomes_project 6 875834 891974 - Gm43986 lincRNA lincRNA MGP_NODShiLtJ_T0078276.1 MGP_NODShiLtJ_G0030792.1 mouse_genomes_project 6 98494261 98502456 + MGP_NODShiLtJ_P0078276 D6Ertd527e protein_coding protein_coding MGP_NODShiLtJ_T0078277.1 MGP_NODShiLtJ_G0030792.1 mouse_genomes_project 6 98494263 98502512 + MGP_NODShiLtJ_P0078277 D6Ertd527e protein_coding protein_coding MGP_NODShiLtJ_T0078278.1 MGP_NODShiLtJ_G0030792.1 mouse_genomes_project 6 98494263 98502513 + MGP_NODShiLtJ_P0078278 D6Ertd527e protein_coding protein_coding MGP_NODShiLtJ_T0078279.1 MGP_NODShiLtJ_G0030792.1 mouse_genomes_project 6 98494297 98500923 + D6Ertd527e protein_coding processed_transcript MGP_NODShiLtJ_T0078280.1 MGP_NODShiLtJ_G0030792.1 mouse_genomes_project 6 98494328 98500915 + D6Ertd527e protein_coding processed_transcript MGP_NODShiLtJ_T0077201.1 MGP_NODShiLtJ_G0030543.1 mouse_genomes_project 6 57367166 57369581 - MGP_NODShiLtJ_P0077201 Hoxa2 protein_coding protein_coding MGP_NODShiLtJ_T0078833.1 MGP_NODShiLtJ_G0030908.1 mouse_genomes_project 6 122460583 122467707 + MGP_NODShiLtJ_P0078833 Bhlhe40 protein_coding protein_coding MGP_NODShiLtJ_T0078834.1 MGP_NODShiLtJ_G0030908.1 mouse_genomes_project 6 122460753 122461289 + Bhlhe40 protein_coding retained_intron MGP_NODShiLtJ_T0078835.1 MGP_NODShiLtJ_G0030908.1 mouse_genomes_project 6 122460828 122462654 + MGP_NODShiLtJ_P0078835 Bhlhe40 protein_coding protein_coding MGP_NODShiLtJ_T0078836.1 MGP_NODShiLtJ_G0030908.1 mouse_genomes_project 6 122463000 122465620 + Bhlhe40 protein_coding retained_intron MGP_NODShiLtJ_T0015146.1 MGP_NODShiLtJ_G0013254.1 mouse_genomes_project 6 17776445 17777406 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078365.1 MGP_NODShiLtJ_G0030813.1 mouse_genomes_project 6 99681836 99682826 + MGP_NODShiLtJ_P0078365 Dnajb8 protein_coding protein_coding MGP_NODShiLtJ_T0078366.1 MGP_NODShiLtJ_G0030813.1 mouse_genomes_project 6 99682453 99715563 + MGP_NODShiLtJ_P0078366 Dnajb8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080137.1 MGP_NODShiLtJ_G0031177.1 mouse_genomes_project 6 147947843 147958348 + MGP_NODShiLtJ_P0080137 Magohb protein_coding protein_coding MGP_NODShiLtJ_T0080138.1 MGP_NODShiLtJ_G0031177.1 mouse_genomes_project 6 147947857 147954611 + MGP_NODShiLtJ_P0080138 Magohb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080139.1 MGP_NODShiLtJ_G0031177.1 mouse_genomes_project 6 147947857 147958061 + MGP_NODShiLtJ_P0080139 Magohb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080140.1 MGP_NODShiLtJ_G0031177.1 mouse_genomes_project 6 147947877 147958239 + MGP_NODShiLtJ_P0080140 Magohb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080141.1 MGP_NODShiLtJ_G0031177.1 mouse_genomes_project 6 147953158 147958097 + Magohb protein_coding retained_intron MGP_NODShiLtJ_T0080142.1 MGP_NODShiLtJ_G0031177.1 mouse_genomes_project 6 147956888 147958249 + Magohb protein_coding retained_intron MGP_NODShiLtJ_T0000282.1 MGP_NODShiLtJ_G0000220.1 mouse_genomes_project 6 75968287 75968784 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0015541.1 MGP_NODShiLtJ_G0013649.1 mouse_genomes_project 6 167568004 167568612 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076751.1 MGP_NODShiLtJ_G0030412.1 mouse_genomes_project 6 43102403 43499227 + MGP_NODShiLtJ_P0076751 Tmem178b protein_coding protein_coding MGP_NODShiLtJ_T0076752.1 MGP_NODShiLtJ_G0030412.1 mouse_genomes_project 6 43349648 43492589 + MGP_NODShiLtJ_P0076752 Tmem178b protein_coding protein_coding MGP_NODShiLtJ_T0076753.1 MGP_NODShiLtJ_G0030412.1 mouse_genomes_project 6 43493052 43499302 + Tmem178b protein_coding retained_intron MGP_NODShiLtJ_T0075902.1 MGP_NODShiLtJ_G0030251.1 mouse_genomes_project 6 4790547 4800892 + MGP_NODShiLtJ_P0075902 Tac1 protein_coding protein_coding MGP_NODShiLtJ_T0075903.1 MGP_NODShiLtJ_G0030251.1 mouse_genomes_project 6 4790679 4800886 + MGP_NODShiLtJ_P0075903 Tac1 protein_coding protein_coding MGP_NODShiLtJ_T0075904.1 MGP_NODShiLtJ_G0030251.1 mouse_genomes_project 6 4790701 4800610 + MGP_NODShiLtJ_P0075904 Tac1 protein_coding protein_coding MGP_NODShiLtJ_T0075905.1 MGP_NODShiLtJ_G0030251.1 mouse_genomes_project 6 4800277 4805185 + Tac1 protein_coding processed_transcript MGP_NODShiLtJ_T0100658.1 MGP_NODShiLtJ_G0039052.1 mouse_genomes_project 6 29603590 29603707 + Gm26310 snoRNA snoRNA MGP_NODShiLtJ_T0079799.1 MGP_NODShiLtJ_G0031089.1 mouse_genomes_project 6 140844220 140848737 + MGP_NODShiLtJ_P0079799 Acrbp protein_coding protein_coding MGP_NODShiLtJ_T0079800.1 MGP_NODShiLtJ_G0031089.1 mouse_genomes_project 6 140844479 140846029 + MGP_NODShiLtJ_P0079800 Acrbp protein_coding protein_coding MGP_NODShiLtJ_T0079801.1 MGP_NODShiLtJ_G0031089.1 mouse_genomes_project 6 140844491 140858761 + MGP_NODShiLtJ_P0079801 Acrbp protein_coding protein_coding MGP_NODShiLtJ_T0079802.1 MGP_NODShiLtJ_G0031089.1 mouse_genomes_project 6 140844499 140846081 + MGP_NODShiLtJ_P0079802 Acrbp protein_coding protein_coding MGP_NODShiLtJ_T0079803.1 MGP_NODShiLtJ_G0031089.1 mouse_genomes_project 6 140846387 140848736 + Acrbp protein_coding processed_transcript MGP_NODShiLtJ_T0079804.1 MGP_NODShiLtJ_G0031089.1 mouse_genomes_project 6 140848344 140849751 + Acrbp protein_coding retained_intron MGP_NODShiLtJ_T0079805.1 MGP_NODShiLtJ_G0031089.1 mouse_genomes_project 6 140857682 140858736 + Acrbp protein_coding retained_intron MGP_NODShiLtJ_T0005022.1 MGP_NODShiLtJ_G0004282.1 mouse_genomes_project 6 140255849 140279185 + antisense antisense MGP_NODShiLtJ_T0080303.1 MGP_NODShiLtJ_G0031236.1 mouse_genomes_project 6 154420237 154426596 - MGP_NODShiLtJ_P0080303 Hist4h4 protein_coding protein_coding MGP_NODShiLtJ_T0078991.1 MGP_NODShiLtJ_G0030935.1 mouse_genomes_project 6 127981382 127989598 - MGP_NODShiLtJ_P0078991 Prrt3 protein_coding protein_coding MGP_NODShiLtJ_T0078992.1 MGP_NODShiLtJ_G0030935.1 mouse_genomes_project 6 127981668 127989646 - MGP_NODShiLtJ_P0078992 Prrt3 protein_coding protein_coding MGP_NODShiLtJ_T0078993.1 MGP_NODShiLtJ_G0030935.1 mouse_genomes_project 6 127981838 127989533 - MGP_NODShiLtJ_P0078993 Prrt3 protein_coding protein_coding MGP_NODShiLtJ_T0078994.1 MGP_NODShiLtJ_G0030935.1 mouse_genomes_project 6 127984011 127989602 - MGP_NODShiLtJ_P0078994 Prrt3 protein_coding protein_coding MGP_NODShiLtJ_T0078995.1 MGP_NODShiLtJ_G0030935.1 mouse_genomes_project 6 127984043 127989608 - MGP_NODShiLtJ_P0078995 Prrt3 protein_coding protein_coding MGP_NODShiLtJ_T0100653.1 MGP_NODShiLtJ_G0039047.1 mouse_genomes_project 6 12741002 12741118 + Gm23760 snoRNA snoRNA MGP_NODShiLtJ_T0015284.1 MGP_NODShiLtJ_G0013392.1 mouse_genomes_project 6 74431691 74431917 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015339.1 MGP_NODShiLtJ_G0013447.1 mouse_genomes_project 6 94910685 94911232 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077441.1 MGP_NODShiLtJ_G0030620.1 mouse_genomes_project 6 64159876 64160961 + MGP_NODShiLtJ_P0077441 Vmn1r28 protein_coding protein_coding MGP_NODShiLtJ_T0077521.1 MGP_NODShiLtJ_G0030637.1 mouse_genomes_project 6 73518669 73565886 + MGP_NODShiLtJ_P0077521 Tnip3 protein_coding protein_coding MGP_NODShiLtJ_T0077522.1 MGP_NODShiLtJ_G0030637.1 mouse_genomes_project 6 73518699 73519933 + Tnip3 protein_coding processed_transcript MGP_NODShiLtJ_T0077523.1 MGP_NODShiLtJ_G0030637.1 mouse_genomes_project 6 73518730 73521972 + Tnip3 protein_coding retained_intron MGP_NODShiLtJ_T0077524.1 MGP_NODShiLtJ_G0030637.1 mouse_genomes_project 6 73518758 73523385 + Tnip3 protein_coding retained_intron MGP_NODShiLtJ_T0080051.1 MGP_NODShiLtJ_G0031146.1 mouse_genomes_project 6 145276039 145284127 + MGP_NODShiLtJ_P0080051 protein_coding protein_coding MGP_NODShiLtJ_T0076137.1 MGP_NODShiLtJ_G0030293.1 mouse_genomes_project 6 23582171 23779308 + MGP_NODShiLtJ_P0076137 Ptprz1 protein_coding protein_coding MGP_NODShiLtJ_T0076138.1 MGP_NODShiLtJ_G0030293.1 mouse_genomes_project 6 23582366 23726083 + MGP_NODShiLtJ_P0076138 Ptprz1 protein_coding protein_coding MGP_NODShiLtJ_T0076139.1 MGP_NODShiLtJ_G0030293.1 mouse_genomes_project 6 23582421 23778977 + MGP_NODShiLtJ_P0076139 Ptprz1 protein_coding protein_coding MGP_NODShiLtJ_T0076140.1 MGP_NODShiLtJ_G0030293.1 mouse_genomes_project 6 23691967 23692402 + Ptprz1 protein_coding retained_intron MGP_NODShiLtJ_T0076141.1 MGP_NODShiLtJ_G0030293.1 mouse_genomes_project 6 23707010 23720938 + Ptprz1 protein_coding retained_intron MGP_NODShiLtJ_T0076142.1 MGP_NODShiLtJ_G0030293.1 mouse_genomes_project 6 23774659 23777895 + Ptprz1 protein_coding retained_intron MGP_NODShiLtJ_T0015159.1 MGP_NODShiLtJ_G0013267.1 mouse_genomes_project 6 23499593 23500288 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077663.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80764949 80812772 + MGP_NODShiLtJ_P0077663 Polr1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077664.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80764957 80835054 + MGP_NODShiLtJ_P0077664 Polr1a protein_coding protein_coding MGP_NODShiLtJ_T0077665.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80764965 80779265 + Polr1a protein_coding retained_intron MGP_NODShiLtJ_T0077666.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80768221 80812657 + Polr1a protein_coding retained_intron MGP_NODShiLtJ_T0077667.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80783906 80784523 + Polr1a protein_coding retained_intron MGP_NODShiLtJ_T0077668.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80788983 80789574 + Polr1a protein_coding retained_intron MGP_NODShiLtJ_T0077669.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80793768 80799148 + Polr1a protein_coding processed_transcript MGP_NODShiLtJ_T0077670.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80805996 80812458 + MGP_NODShiLtJ_P0077670 Polr1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077671.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80805997 80807397 + Polr1a protein_coding retained_intron MGP_NODShiLtJ_T0077672.1 MGP_NODShiLtJ_G0030674.1 mouse_genomes_project 6 80813803 80838015 + MGP_NODShiLtJ_P0077672 Polr1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002033.1 MGP_NODShiLtJ_G0001945.1 mouse_genomes_project 6 101960034 101962503 + TEC TEC MGP_NODShiLtJ_T0010689.1 MGP_NODShiLtJ_G0008822.1 mouse_genomes_project 6 127906260 127906340 + Gm24387 miRNA miRNA MGP_NODShiLtJ_T0015201.1 MGP_NODShiLtJ_G0013309.1 mouse_genomes_project 6 48663788 48663933 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015422.1 MGP_NODShiLtJ_G0013530.1 mouse_genomes_project 6 128576032 128576084 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080027.1 MGP_NODShiLtJ_G0031137.1 mouse_genomes_project 6 144742170 145008898 - MGP_NODShiLtJ_P0080027 Klrb1a protein_coding protein_coding MGP_NODShiLtJ_T0080028.1 MGP_NODShiLtJ_G0031137.1 mouse_genomes_project 6 144742288 145008836 - MGP_NODShiLtJ_P0080028 Klrb1a protein_coding protein_coding MGP_NODShiLtJ_T0080029.1 MGP_NODShiLtJ_G0031137.1 mouse_genomes_project 6 144742531 145008780 - MGP_NODShiLtJ_P0080029 Klrb1a protein_coding protein_coding MGP_NODShiLtJ_T0080030.1 MGP_NODShiLtJ_G0031137.1 mouse_genomes_project 6 144742531 145008877 - MGP_NODShiLtJ_P0080030 Klrb1a protein_coding protein_coding MGP_NODShiLtJ_T0077816.1 MGP_NODShiLtJ_G0030708.1 mouse_genomes_project 6 90587883 91564897 + MGP_NODShiLtJ_P0077816 Lrrtm4 protein_coding protein_coding MGP_NODShiLtJ_T0077817.1 MGP_NODShiLtJ_G0030708.1 mouse_genomes_project 6 90587894 90592868 + MGP_NODShiLtJ_P0077817 Lrrtm4 protein_coding protein_coding MGP_NODShiLtJ_T0077818.1 MGP_NODShiLtJ_G0030708.1 mouse_genomes_project 6 90587924 90595790 + MGP_NODShiLtJ_P0077818 Lrrtm4 protein_coding protein_coding MGP_NODShiLtJ_T0077819.1 MGP_NODShiLtJ_G0030708.1 mouse_genomes_project 6 90587924 91564075 + MGP_NODShiLtJ_P0077819 Lrrtm4 protein_coding protein_coding MGP_NODShiLtJ_T0077820.1 MGP_NODShiLtJ_G0030708.1 mouse_genomes_project 6 90588017 91564895 + MGP_NODShiLtJ_P0077820 Lrrtm4 protein_coding protein_coding MGP_NODShiLtJ_T0077821.1 MGP_NODShiLtJ_G0030708.1 mouse_genomes_project 6 90588349 90593035 + MGP_NODShiLtJ_P0077821 Lrrtm4 protein_coding protein_coding MGP_NODShiLtJ_T0077822.1 MGP_NODShiLtJ_G0030708.1 mouse_genomes_project 6 90589192 90595790 + MGP_NODShiLtJ_P0077822 Lrrtm4 protein_coding protein_coding MGP_NODShiLtJ_T0011548.1 MGP_NODShiLtJ_G0009681.1 mouse_genomes_project 6 94766504 94766970 + Gm27631 misc_RNA misc_RNA MGP_NODShiLtJ_T0011564.1 MGP_NODShiLtJ_G0009697.1 mouse_genomes_project 6 160347066 160347283 - Gm22036 misc_RNA misc_RNA MGP_NODShiLtJ_T0079604.1 MGP_NODShiLtJ_G0031052.1 mouse_genomes_project 6 139601013 139672348 + MGP_NODShiLtJ_P0079604 protein_coding protein_coding MGP_NODShiLtJ_T0001873.1 MGP_NODShiLtJ_G0001785.1 mouse_genomes_project 6 1956207 1956527 + TEC TEC MGP_NODShiLtJ_T0099443.1 MGP_NODShiLtJ_G0037837.1 mouse_genomes_project 6 108635784 108635888 - Gm26011 snRNA snRNA MGP_NODShiLtJ_T0005036.1 MGP_NODShiLtJ_G0004294.1 mouse_genomes_project 6 143993666 144008582 - Gm15870 antisense antisense MGP_NODShiLtJ_T0077935.1 MGP_NODShiLtJ_G0030732.1 mouse_genomes_project 6 94170391 94177385 - MGP_NODShiLtJ_P0077935 Wdr54 protein_coding protein_coding MGP_NODShiLtJ_T0077937.1 MGP_NODShiLtJ_G0030732.1 mouse_genomes_project 6 94173722 94177208 - Wdr54 protein_coding retained_intron MGP_NODShiLtJ_T0077938.1 MGP_NODShiLtJ_G0030732.1 mouse_genomes_project 6 94173726 94177353 - Wdr54 protein_coding retained_intron MGP_NODShiLtJ_T0077939.1 MGP_NODShiLtJ_G0030732.1 mouse_genomes_project 6 94174298 94177253 - Wdr54 protein_coding processed_transcript MGP_NODShiLtJ_T0077940.1 MGP_NODShiLtJ_G0030732.1 mouse_genomes_project 6 94175540 94177385 - MGP_NODShiLtJ_P0077940 Wdr54 protein_coding protein_coding MGP_NODShiLtJ_T0077941.1 MGP_NODShiLtJ_G0030732.1 mouse_genomes_project 6 94176198 94177367 - Wdr54 protein_coding processed_transcript MGP_NODShiLtJ_T0011562.1 MGP_NODShiLtJ_G0009695.1 mouse_genomes_project 6 158768933 158769186 + Gm25780 misc_RNA misc_RNA MGP_NODShiLtJ_T0102025.1 MGP_NODShiLtJ_G0040193.1 mouse_genomes_project 6 139490455 139498717 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008556.1 MGP_NODShiLtJ_G0006910.1 mouse_genomes_project 6 81042173 81047015 + Gm45050 lincRNA lincRNA MGP_NODShiLtJ_T0079854.1 MGP_NODShiLtJ_G0031098.1 mouse_genomes_project 6 141031915 141039878 - MGP_NODShiLtJ_P0079854 Tapbpl protein_coding protein_coding MGP_NODShiLtJ_T0079736.1 MGP_NODShiLtJ_G0031080.1 mouse_genomes_project 6 140640338 140645811 - MGP_NODShiLtJ_P0079736 Gpr162 protein_coding protein_coding MGP_NODShiLtJ_T0079737.1 MGP_NODShiLtJ_G0031080.1 mouse_genomes_project 6 140640341 140645606 - Gpr162 protein_coding retained_intron MGP_NODShiLtJ_T0079738.1 MGP_NODShiLtJ_G0031080.1 mouse_genomes_project 6 140640342 140645877 - MGP_NODShiLtJ_P0079738 Gpr162 protein_coding protein_coding MGP_NODShiLtJ_T0079739.1 MGP_NODShiLtJ_G0031080.1 mouse_genomes_project 6 140643624 140645606 - Gpr162 protein_coding processed_transcript MGP_NODShiLtJ_T0075997.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 13720277 14436279 + MGP_NODShiLtJ_P0075997 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0075998.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 13720316 14395999 + Foxp2 protein_coding retained_intron MGP_NODShiLtJ_T0075999.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 13720379 13811696 + Foxp2 protein_coding processed_transcript MGP_NODShiLtJ_T0076000.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 13720405 14256146 + MGP_NODShiLtJ_P0076000 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076001.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 13720406 14257128 + Foxp2 protein_coding retained_intron MGP_NODShiLtJ_T0076002.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14091000 14104513 + MGP_NODShiLtJ_P0076002 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076003.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14091776 14435503 + MGP_NODShiLtJ_P0076003 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076004.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14091776 14432631 + MGP_NODShiLtJ_P0076004 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076005.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14091776 14432350 + MGP_NODShiLtJ_P0076005 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076006.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14091833 14377335 + MGP_NODShiLtJ_P0076006 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076007.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14103633 14380363 + Foxp2 protein_coding retained_intron MGP_NODShiLtJ_T0076008.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14103635 14361291 + MGP_NODShiLtJ_P0076008 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076009.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14103635 14389736 + MGP_NODShiLtJ_P0076009 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076010.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14103648 14389736 + MGP_NODShiLtJ_P0076010 Foxp2 protein_coding protein_coding MGP_NODShiLtJ_T0076011.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14196606 14256146 + Foxp2 protein_coding processed_transcript MGP_NODShiLtJ_T0076012.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14296538 14297716 + Foxp2 protein_coding retained_intron MGP_NODShiLtJ_T0076013.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14358160 14359560 + Foxp2 protein_coding processed_transcript MGP_NODShiLtJ_T0076014.1 MGP_NODShiLtJ_G0030272.1 mouse_genomes_project 6 14358160 14433375 + MGP_NODShiLtJ_P0076014 Foxp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011526.1 MGP_NODShiLtJ_G0009659.1 mouse_genomes_project 6 33003374 33003473 + Gm27568 misc_RNA misc_RNA MGP_NODShiLtJ_T0002625.1 MGP_NODShiLtJ_G0002508.1 mouse_genomes_project 6 44390294 44390833 + MGP_NODShiLtJ_P0002625 Trbv3 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0015535.1 MGP_NODShiLtJ_G0013643.1 mouse_genomes_project 6 165404368 165404716 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002006.1 MGP_NODShiLtJ_G0001918.1 mouse_genomes_project 6 97941369 97948056 + TEC TEC MGP_NODShiLtJ_T0080424.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158659924 158838807 + MGP_NODShiLtJ_P0080424 Plekha5 protein_coding protein_coding MGP_NODShiLtJ_T0080425.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158660030 158827697 + MGP_NODShiLtJ_P0080425 Plekha5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080426.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158660031 158824885 + MGP_NODShiLtJ_P0080426 Plekha5 protein_coding protein_coding MGP_NODShiLtJ_T0080427.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158669465 158790882 + MGP_NODShiLtJ_P0080427 Plekha5 protein_coding protein_coding MGP_NODShiLtJ_T0080428.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158754412 158790883 + MGP_NODShiLtJ_P0080428 Plekha5 protein_coding protein_coding MGP_NODShiLtJ_T0080429.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158762853 158824885 + MGP_NODShiLtJ_P0080429 Plekha5 protein_coding protein_coding MGP_NODShiLtJ_T0080430.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158773053 158838807 + Plekha5 protein_coding processed_transcript MGP_NODShiLtJ_T0080431.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158781840 158838807 + MGP_NODShiLtJ_P0080431 Plekha5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080432.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158781866 158795811 + Plekha5 protein_coding processed_transcript MGP_NODShiLtJ_T0080433.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158781870 158838807 + MGP_NODShiLtJ_P0080433 Plekha5 protein_coding protein_coding MGP_NODShiLtJ_T0080434.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158782005 158838807 + MGP_NODShiLtJ_P0080434 Plekha5 protein_coding protein_coding MGP_NODShiLtJ_T0080435.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158806346 158838813 + MGP_NODShiLtJ_P0080435 Plekha5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080436.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158807178 158818153 + Plekha5 protein_coding retained_intron MGP_NODShiLtJ_T0080437.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158814664 158818160 + Plekha5 protein_coding retained_intron MGP_NODShiLtJ_T0080438.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158814852 158838807 + MGP_NODShiLtJ_P0080438 Plekha5 protein_coding protein_coding MGP_NODShiLtJ_T0080439.1 MGP_NODShiLtJ_G0031260.1 mouse_genomes_project 6 158820237 158822411 + Plekha5 protein_coding retained_intron MGP_NODShiLtJ_T0008597.1 MGP_NODShiLtJ_G0006940.1 mouse_genomes_project 6 102029470 102031228 - Gm44117 lincRNA lincRNA MGP_NODShiLtJ_T0011563.1 MGP_NODShiLtJ_G0009696.1 mouse_genomes_project 6 160113214 160113525 - Gm23069 misc_RNA misc_RNA MGP_NODShiLtJ_T0077535.1 MGP_NODShiLtJ_G0030641.1 mouse_genomes_project 6 74573991 74585889 + MGP_NODShiLtJ_P0077535 Mad2l1 protein_coding protein_coding MGP_NODShiLtJ_T0077536.1 MGP_NODShiLtJ_G0030641.1 mouse_genomes_project 6 74574026 74579689 + Mad2l1 protein_coding retained_intron MGP_NODShiLtJ_T0077537.1 MGP_NODShiLtJ_G0030641.1 mouse_genomes_project 6 74574069 74579660 + MGP_NODShiLtJ_P0077537 Mad2l1 protein_coding protein_coding MGP_NODShiLtJ_T0077538.1 MGP_NODShiLtJ_G0030641.1 mouse_genomes_project 6 74574279 74574675 + Mad2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0079595.1 MGP_NODShiLtJ_G0031049.1 mouse_genomes_project 6 138765299 138773381 - MGP_NODShiLtJ_P0079595 Clec4e protein_coding protein_coding MGP_NODShiLtJ_T0079596.1 MGP_NODShiLtJ_G0031049.1 mouse_genomes_project 6 138765459 138773380 - Clec4e protein_coding retained_intron MGP_NODShiLtJ_T0079597.1 MGP_NODShiLtJ_G0031049.1 mouse_genomes_project 6 138765655 138773381 - Clec4e protein_coding retained_intron MGP_NODShiLtJ_T0079598.1 MGP_NODShiLtJ_G0031049.1 mouse_genomes_project 6 138766178 138773381 - Clec4e protein_coding retained_intron MGP_NODShiLtJ_T0079599.1 MGP_NODShiLtJ_G0031049.1 mouse_genomes_project 6 138767001 138773381 - MGP_NODShiLtJ_P0079599 Clec4e protein_coding protein_coding MGP_NODShiLtJ_T0079600.1 MGP_NODShiLtJ_G0031049.1 mouse_genomes_project 6 138767204 138773377 - MGP_NODShiLtJ_P0079600 Clec4e protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079601.1 MGP_NODShiLtJ_G0031049.1 mouse_genomes_project 6 138771287 138773381 - Clec4e protein_coding processed_transcript MGP_NODShiLtJ_T0079975.1 MGP_NODShiLtJ_G0031127.1 mouse_genomes_project 6 144417742 144458803 - MGP_NODShiLtJ_P0079975 Tulp3 protein_coding protein_coding MGP_NODShiLtJ_T0079976.1 MGP_NODShiLtJ_G0031127.1 mouse_genomes_project 6 144420561 144423111 - Tulp3 protein_coding processed_transcript MGP_NODShiLtJ_T0079977.1 MGP_NODShiLtJ_G0031127.1 mouse_genomes_project 6 144429178 144458793 - Tulp3 protein_coding retained_intron MGP_NODShiLtJ_T0079978.1 MGP_NODShiLtJ_G0031127.1 mouse_genomes_project 6 144431748 144458767 - MGP_NODShiLtJ_P0079978 Tulp3 protein_coding protein_coding MGP_NODShiLtJ_T0079979.1 MGP_NODShiLtJ_G0031127.1 mouse_genomes_project 6 144440262 144443719 - Tulp3 protein_coding retained_intron MGP_NODShiLtJ_T0079980.1 MGP_NODShiLtJ_G0031127.1 mouse_genomes_project 6 144440966 144458777 - MGP_NODShiLtJ_P0079980 Tulp3 protein_coding protein_coding MGP_NODShiLtJ_T0008701.1 MGP_NODShiLtJ_G0007021.1 mouse_genomes_project 6 165951337 165986917 + E330012B07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008702.1 MGP_NODShiLtJ_G0007021.1 mouse_genomes_project 6 165951355 165981140 + E330012B07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008484.1 MGP_NODShiLtJ_G0006858.1 mouse_genomes_project 6 37189067 37191608 - Gm13861 lincRNA lincRNA MGP_NODShiLtJ_T0015504.1 MGP_NODShiLtJ_G0013612.1 mouse_genomes_project 6 149928549 149928904 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000304.1 MGP_NODShiLtJ_G0000242.1 mouse_genomes_project 6 77437526 77438160 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0004892.1 MGP_NODShiLtJ_G0004197.1 mouse_genomes_project 6 55652111 55681977 + 5430402O13Rik antisense antisense MGP_NODShiLtJ_T0004893.1 MGP_NODShiLtJ_G0004197.1 mouse_genomes_project 6 55652206 55681934 + 5430402O13Rik antisense antisense MGP_NODShiLtJ_T0099457.1 MGP_NODShiLtJ_G0037851.1 mouse_genomes_project 6 135594546 135594648 + Gm24391 snRNA snRNA MGP_NODShiLtJ_T0076794.1 MGP_NODShiLtJ_G0030429.1 mouse_genomes_project 6 44330146 44334879 - MGP_NODShiLtJ_P0076794 protein_coding protein_coding MGP_NODShiLtJ_T0005009.1 MGP_NODShiLtJ_G0004269.1 mouse_genomes_project 6 128214967 128216118 + Gm26982 antisense antisense MGP_NODShiLtJ_T0015409.1 MGP_NODShiLtJ_G0013517.1 mouse_genomes_project 6 123334406 123335031 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078559.1 MGP_NODShiLtJ_G0030854.1 mouse_genomes_project 6 103098106 103112867 + MGP_NODShiLtJ_P0078559 Tmem43 protein_coding protein_coding MGP_NODShiLtJ_T0078560.1 MGP_NODShiLtJ_G0030854.1 mouse_genomes_project 6 103098130 103102037 + Tmem43 protein_coding retained_intron MGP_NODShiLtJ_T0078561.1 MGP_NODShiLtJ_G0030854.1 mouse_genomes_project 6 103098154 103098879 + Tmem43 protein_coding processed_transcript MGP_NODShiLtJ_T0078562.1 MGP_NODShiLtJ_G0030854.1 mouse_genomes_project 6 103098162 103103544 + Tmem43 protein_coding retained_intron MGP_NODShiLtJ_T0078563.1 MGP_NODShiLtJ_G0030854.1 mouse_genomes_project 6 103101003 103102661 + Tmem43 protein_coding processed_transcript MGP_NODShiLtJ_T0077581.1 MGP_NODShiLtJ_G0030654.1 mouse_genomes_project 6 75592152 75679511 - MGP_NODShiLtJ_P0077581 Il23r protein_coding protein_coding MGP_NODShiLtJ_T0076647.1 MGP_NODShiLtJ_G0030392.1 mouse_genomes_project 6 41319593 41381118 - MGP_NODShiLtJ_P0076647 Zc3hav1 protein_coding protein_coding MGP_NODShiLtJ_T0076648.1 MGP_NODShiLtJ_G0030392.1 mouse_genomes_project 6 41324764 41381118 - MGP_NODShiLtJ_P0076648 Zc3hav1 protein_coding protein_coding MGP_NODShiLtJ_T0076649.1 MGP_NODShiLtJ_G0030392.1 mouse_genomes_project 6 41336307 41381448 - MGP_NODShiLtJ_P0076649 Zc3hav1 protein_coding protein_coding MGP_NODShiLtJ_T0076650.1 MGP_NODShiLtJ_G0030392.1 mouse_genomes_project 6 41336307 41381448 - MGP_NODShiLtJ_P0076650 Zc3hav1 protein_coding protein_coding MGP_NODShiLtJ_T0000290.1 MGP_NODShiLtJ_G0000228.1 mouse_genomes_project 6 76737306 76737964 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0079216.1 MGP_NODShiLtJ_G0030975.1 mouse_genomes_project 6 131068754 131133598 - MGP_NODShiLtJ_P0079216 Alox5 protein_coding protein_coding MGP_NODShiLtJ_T0079217.1 MGP_NODShiLtJ_G0030975.1 mouse_genomes_project 6 131068951 131133551 - Alox5 protein_coding retained_intron MGP_NODShiLtJ_T0079218.1 MGP_NODShiLtJ_G0030975.1 mouse_genomes_project 6 131068953 131071449 - Alox5 protein_coding retained_intron MGP_NODShiLtJ_T0079219.1 MGP_NODShiLtJ_G0030975.1 mouse_genomes_project 6 131069284 131133444 - MGP_NODShiLtJ_P0079219 Alox5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079220.1 MGP_NODShiLtJ_G0030975.1 mouse_genomes_project 6 131069396 131133444 - MGP_NODShiLtJ_P0079220 Alox5 protein_coding protein_coding MGP_NODShiLtJ_T0079221.1 MGP_NODShiLtJ_G0030975.1 mouse_genomes_project 6 131069396 131133444 - MGP_NODShiLtJ_P0079221 Alox5 protein_coding protein_coding MGP_NODShiLtJ_T0079222.1 MGP_NODShiLtJ_G0030975.1 mouse_genomes_project 6 131071247 131072677 - Alox5 protein_coding retained_intron MGP_NODShiLtJ_T0079223.1 MGP_NODShiLtJ_G0030975.1 mouse_genomes_project 6 131074126 131083712 - Alox5 protein_coding processed_transcript MGP_NODShiLtJ_T0077211.1 MGP_NODShiLtJ_G0030550.1 mouse_genomes_project 6 57420800 57426689 - MGP_NODShiLtJ_P0077211 Hoxa7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077212.1 MGP_NODShiLtJ_G0030550.1 mouse_genomes_project 6 57420807 57423801 - MGP_NODShiLtJ_P0077212 Hoxa7 protein_coding protein_coding MGP_NODShiLtJ_T0077213.1 MGP_NODShiLtJ_G0030550.1 mouse_genomes_project 6 57422049 57425007 - MGP_NODShiLtJ_P0077213 Hoxa7 protein_coding protein_coding MGP_NODShiLtJ_T0077214.1 MGP_NODShiLtJ_G0030550.1 mouse_genomes_project 6 57422305 57428136 - MGP_NODShiLtJ_P0077214 Hoxa7 protein_coding protein_coding MGP_NODShiLtJ_T0077215.1 MGP_NODShiLtJ_G0030550.1 mouse_genomes_project 6 57422736 57423748 - MGP_NODShiLtJ_P0077215 Hoxa7 protein_coding protein_coding MGP_NODShiLtJ_T0101183.1 MGP_NODShiLtJ_G0039498.1 mouse_genomes_project 6 138350085 138353181 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101184.1 MGP_NODShiLtJ_G0039498.1 mouse_genomes_project 6 138350500 138350770 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0080488.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160814572 160854296 - MGP_NODShiLtJ_P0080488 Recql protein_coding protein_coding MGP_NODShiLtJ_T0080490.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160823705 160854334 - MGP_NODShiLtJ_P0080490 Recql protein_coding protein_coding MGP_NODShiLtJ_T0080491.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160823709 160834632 - MGP_NODShiLtJ_P0080491 Recql protein_coding protein_coding MGP_NODShiLtJ_T0080492.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160824619 160830418 - Recql protein_coding processed_transcript MGP_NODShiLtJ_T0080493.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160828131 160854347 - MGP_NODShiLtJ_P0080493 Recql protein_coding protein_coding MGP_NODShiLtJ_T0080494.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160828876 160830330 - MGP_NODShiLtJ_P0080494 Recql protein_coding protein_coding MGP_NODShiLtJ_T0080495.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160832463 160836407 - Recql protein_coding processed_transcript MGP_NODShiLtJ_T0080496.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160835161 160835573 - Recql protein_coding retained_intron MGP_NODShiLtJ_T0080497.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160842539 160854269 - MGP_NODShiLtJ_P0080497 Recql protein_coding protein_coding MGP_NODShiLtJ_T0080498.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160842539 160854234 - MGP_NODShiLtJ_P0080498 Recql protein_coding protein_coding MGP_NODShiLtJ_T0080499.1 MGP_NODShiLtJ_G0031274.1 mouse_genomes_project 6 160844619 160854342 - MGP_NODShiLtJ_P0080499 Recql protein_coding protein_coding MGP_NODShiLtJ_T0015196.1 MGP_NODShiLtJ_G0013304.1 mouse_genomes_project 6 46279987 46280153 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077320.1 MGP_NODShiLtJ_G0030572.1 mouse_genomes_project 6 60451513 60497047 + MGP_NODShiLtJ_P0077320 Gars protein_coding protein_coding MGP_NODShiLtJ_T0077321.1 MGP_NODShiLtJ_G0030572.1 mouse_genomes_project 6 60462768 60467203 + Gars protein_coding retained_intron MGP_NODShiLtJ_T0077322.1 MGP_NODShiLtJ_G0030572.1 mouse_genomes_project 6 60466331 60478284 + Gars protein_coding retained_intron MGP_NODShiLtJ_T0015486.1 MGP_NODShiLtJ_G0013594.1 mouse_genomes_project 6 145271755 145272862 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100693.1 MGP_NODShiLtJ_G0039087.1 mouse_genomes_project 6 105285018 105285148 + Gm22312 snoRNA snoRNA MGP_NODShiLtJ_T0078008.1 MGP_NODShiLtJ_G0030745.1 mouse_genomes_project 6 94774250 94802630 + MGP_NODShiLtJ_P0078008 Vax2 protein_coding protein_coding MGP_NODShiLtJ_T0077720.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81346967 81355416 - MGP_NODShiLtJ_P0077720 Mat2a protein_coding protein_coding MGP_NODShiLtJ_T0077721.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81346968 81350876 - MGP_NODShiLtJ_P0077721 Mat2a protein_coding protein_coding MGP_NODShiLtJ_T0077722.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81348945 81355414 - MGP_NODShiLtJ_P0077722 Mat2a protein_coding protein_coding MGP_NODShiLtJ_T0077723.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81349550 81350961 - MGP_NODShiLtJ_P0077723 Mat2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077724.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81350429 81355414 - MGP_NODShiLtJ_P0077724 Mat2a protein_coding protein_coding MGP_NODShiLtJ_T0077725.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81351692 81355246 - MGP_NODShiLtJ_P0077725 Mat2a protein_coding protein_coding MGP_NODShiLtJ_T0077726.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81352288 81355398 - Mat2a protein_coding retained_intron MGP_NODShiLtJ_T0077727.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81352619 81355401 - Mat2a protein_coding retained_intron MGP_NODShiLtJ_T0077728.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81353261 81355406 - Mat2a protein_coding processed_transcript MGP_NODShiLtJ_T0077729.1 MGP_NODShiLtJ_G0030685.1 mouse_genomes_project 6 81354659 81355414 - Mat2a protein_coding retained_intron MGP_NODShiLtJ_T0000050.1 MGP_NODShiLtJ_G0000040.1 mouse_genomes_project 6 46603047 46603508 + MGP_NODShiLtJ_P0000050 Gm17472 IG_LV_gene IG_LV_gene MGP_NODShiLtJ_T0004870.1 MGP_NODShiLtJ_G0004178.1 mouse_genomes_project 6 36662595 36684902 + Gm13856 antisense antisense MGP_NODShiLtJ_T0004914.1 MGP_NODShiLtJ_G0004212.1 mouse_genomes_project 6 75102118 75103355 - antisense antisense MGP_NODShiLtJ_T0010714.1 MGP_NODShiLtJ_G0008847.1 mouse_genomes_project 6 154430698 154430839 - Gm44364 miRNA miRNA MGP_NODShiLtJ_T0099444.1 MGP_NODShiLtJ_G0037838.1 mouse_genomes_project 6 109732767 109732930 - Gm23510 snRNA snRNA MGP_NODShiLtJ_T0002094.1 MGP_NODShiLtJ_G0002006.1 mouse_genomes_project 6 140883137 140883730 + TEC TEC MGP_NODShiLtJ_T0078481.1 MGP_NODShiLtJ_G0030836.1 mouse_genomes_project 6 101619248 101625901 + MGP_NODShiLtJ_P0078481 Vmn1r50 protein_coding protein_coding MGP_NODShiLtJ_T0078482.1 MGP_NODShiLtJ_G0030836.1 mouse_genomes_project 6 101624968 101625901 + MGP_NODShiLtJ_P0078482 Vmn1r50 protein_coding protein_coding MGP_NODShiLtJ_T0099430.1 MGP_NODShiLtJ_G0037824.1 mouse_genomes_project 6 70558817 70558923 - Gm22212 snRNA snRNA MGP_NODShiLtJ_T0078081.1 MGP_NODShiLtJ_G0030755.1 mouse_genomes_project 6 96301544 96328354 - protein_coding lincRNA MGP_NODShiLtJ_T0015465.1 MGP_NODShiLtJ_G0013573.1 mouse_genomes_project 6 141065783 141066081 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079347.1 MGP_NODShiLtJ_G0031000.1 mouse_genomes_project 6 134380871 134384836 + MGP_NODShiLtJ_P0079347 Fbxl14 protein_coding protein_coding MGP_NODShiLtJ_T0076937.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52252854 52302551 + MGP_NODShiLtJ_P0076937 Cul1 protein_coding protein_coding MGP_NODShiLtJ_T0076938.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52252948 52288838 + MGP_NODShiLtJ_P0076938 Cul1 protein_coding protein_coding MGP_NODShiLtJ_T0076939.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52253360 52330635 + MGP_NODShiLtJ_P0076939 Cul1 protein_coding protein_coding MGP_NODShiLtJ_T0076940.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52253776 52333008 + MGP_NODShiLtJ_P0076940 Cul1 protein_coding protein_coding MGP_NODShiLtJ_T0076941.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52253844 52289050 + MGP_NODShiLtJ_P0076941 Cul1 protein_coding protein_coding MGP_NODShiLtJ_T0076942.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52321695 52332927 + Cul1 protein_coding processed_transcript MGP_NODShiLtJ_T0076943.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52323879 52326659 + Cul1 protein_coding retained_intron MGP_NODShiLtJ_T0076944.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52326575 52330150 + Cul1 protein_coding retained_intron MGP_NODShiLtJ_T0076945.1 MGP_NODShiLtJ_G0030486.1 mouse_genomes_project 6 52330432 52332648 + Cul1 protein_coding processed_transcript MGP_NODShiLtJ_T0077846.1 MGP_NODShiLtJ_G0030714.1 mouse_genomes_project 6 93694876 93750290 - MGP_NODShiLtJ_P0077846 protein_coding protein_coding MGP_NODShiLtJ_T0077847.1 MGP_NODShiLtJ_G0030714.1 mouse_genomes_project 6 93694913 93696163 - protein_coding processed_transcript MGP_NODShiLtJ_T0077848.1 MGP_NODShiLtJ_G0030714.1 mouse_genomes_project 6 93697163 93749199 - MGP_NODShiLtJ_P0077848 protein_coding protein_coding MGP_NODShiLtJ_T0077849.1 MGP_NODShiLtJ_G0030714.1 mouse_genomes_project 6 93730055 93748824 - MGP_NODShiLtJ_P0077849 protein_coding protein_coding MGP_NODShiLtJ_T0076392.1 MGP_NODShiLtJ_G0030344.1 mouse_genomes_project 6 32642461 32697722 + MGP_NODShiLtJ_P0076392 Klhdc10 protein_coding protein_coding MGP_NODShiLtJ_T0076393.1 MGP_NODShiLtJ_G0030344.1 mouse_genomes_project 6 32642587 32699618 + MGP_NODShiLtJ_P0076393 Klhdc10 protein_coding protein_coding MGP_NODShiLtJ_T0076394.1 MGP_NODShiLtJ_G0030344.1 mouse_genomes_project 6 32642591 32694996 + MGP_NODShiLtJ_P0076394 Klhdc10 protein_coding protein_coding MGP_NODShiLtJ_T0076395.1 MGP_NODShiLtJ_G0030344.1 mouse_genomes_project 6 32659724 32691881 + MGP_NODShiLtJ_P0076395 Klhdc10 protein_coding protein_coding MGP_NODShiLtJ_T0076396.1 MGP_NODShiLtJ_G0030344.1 mouse_genomes_project 6 32688199 32695275 + Klhdc10 protein_coding retained_intron MGP_NODShiLtJ_T0076700.1 MGP_NODShiLtJ_G0030402.1 mouse_genomes_project 6 42287945 42359485 - MGP_NODShiLtJ_P0076700 Kdm7a protein_coding protein_coding MGP_NODShiLtJ_T0076701.1 MGP_NODShiLtJ_G0030402.1 mouse_genomes_project 6 42293254 42305880 - Kdm7a protein_coding processed_transcript MGP_NODShiLtJ_T0077433.1 MGP_NODShiLtJ_G0030612.1 mouse_genomes_project 6 63643343 63644252 - MGP_NODShiLtJ_P0077433 protein_coding protein_coding MGP_NODShiLtJ_T0001869.1 MGP_NODShiLtJ_G0001781.1 mouse_genomes_project 6 1556987 1557924 + TEC TEC MGP_NODShiLtJ_T0015275.1 MGP_NODShiLtJ_G0013383.1 mouse_genomes_project 6 73186767 73187962 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001987.1 MGP_NODShiLtJ_G0001899.1 mouse_genomes_project 6 90852988 90856301 + TEC TEC MGP_NODShiLtJ_T0001971.1 MGP_NODShiLtJ_G0001883.1 mouse_genomes_project 6 81585703 81586994 + TEC TEC MGP_NODShiLtJ_T0002108.1 MGP_NODShiLtJ_G0002020.1 mouse_genomes_project 6 146181759 146182144 - TEC TEC MGP_NODShiLtJ_T0015149.1 MGP_NODShiLtJ_G0013257.1 mouse_genomes_project 6 18804617 18805926 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010704.1 MGP_NODShiLtJ_G0008837.1 mouse_genomes_project 6 140899922 140899985 + Mir7045 miRNA miRNA MGP_NODShiLtJ_T0078667.1 MGP_NODShiLtJ_G0030876.1 mouse_genomes_project 6 108160244 108744250 + MGP_NODShiLtJ_P0078667 Fam19a1 protein_coding protein_coding MGP_NODShiLtJ_T0078668.1 MGP_NODShiLtJ_G0030876.1 mouse_genomes_project 6 108160332 108185142 + Fam19a1 protein_coding processed_transcript MGP_NODShiLtJ_T0078669.1 MGP_NODShiLtJ_G0030876.1 mouse_genomes_project 6 108161735 108162996 + Fam19a1 protein_coding processed_transcript MGP_NODShiLtJ_T0078670.1 MGP_NODShiLtJ_G0030876.1 mouse_genomes_project 6 108162389 108743517 + MGP_NODShiLtJ_P0078670 Fam19a1 protein_coding protein_coding MGP_NODShiLtJ_T0000154.1 MGP_NODShiLtJ_G0000113.1 mouse_genomes_project 6 76042673 76043410 - MGP_NODShiLtJ_P0000154 Igkv1-131 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0079224.1 MGP_NODShiLtJ_G0030976.1 mouse_genomes_project 6 131169026 131174513 + MGP_NODShiLtJ_P0079224 Olfr211 protein_coding protein_coding MGP_NODShiLtJ_T0079225.1 MGP_NODShiLtJ_G0030976.1 mouse_genomes_project 6 131173583 131174513 + MGP_NODShiLtJ_P0079225 Olfr211 protein_coding protein_coding MGP_NODShiLtJ_T0000180.1 MGP_NODShiLtJ_G0000131.1 mouse_genomes_project 6 77193400 77193868 - MGP_NODShiLtJ_P0000180 Igkv19-93 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000181.1 MGP_NODShiLtJ_G0000131.1 mouse_genomes_project 6 77193400 77193884 - MGP_NODShiLtJ_P0000181 Igkv19-93 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0010706.1 MGP_NODShiLtJ_G0008839.1 mouse_genomes_project 6 141042667 141042796 - Mir8113 miRNA miRNA MGP_NODShiLtJ_T0077398.1 MGP_NODShiLtJ_G0030594.1 mouse_genomes_project 6 62752679 62753677 + MGP_NODShiLtJ_P0077398 protein_coding protein_coding MGP_NODShiLtJ_T0002684.1 MGP_NODShiLtJ_G0002557.1 mouse_genomes_project 6 44428726 44429011 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0002649.1 MGP_NODShiLtJ_G0002527.1 mouse_genomes_project 6 45019550 45020231 - MGP_NODShiLtJ_P0002649 Trbv31 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002650.1 MGP_NODShiLtJ_G0002527.1 mouse_genomes_project 6 45019552 45020312 - MGP_NODShiLtJ_P0002650 Trbv31 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0011530.1 MGP_NODShiLtJ_G0009663.1 mouse_genomes_project 6 52610381 52610493 - Rny1 misc_RNA misc_RNA MGP_NODShiLtJ_T0076479.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35159064 35267511 - MGP_NODShiLtJ_P0076479 Chchd3 protein_coding protein_coding MGP_NODShiLtJ_T0076480.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35160305 35447007 - MGP_NODShiLtJ_P0076480 Chchd3 protein_coding protein_coding MGP_NODShiLtJ_T0076481.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35160312 35446983 - MGP_NODShiLtJ_P0076481 Chchd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076482.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35160725 35275994 - Chchd3 protein_coding processed_transcript MGP_NODShiLtJ_T0076483.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35160730 35275951 - Chchd3 protein_coding processed_transcript MGP_NODShiLtJ_T0076484.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35160731 35275944 - Chchd3 protein_coding processed_transcript MGP_NODShiLtJ_T0076485.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35160742 35174677 - Chchd3 protein_coding processed_transcript MGP_NODShiLtJ_T0076486.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35160782 35191040 - Chchd3 protein_coding processed_transcript MGP_NODShiLtJ_T0076487.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35174672 35446984 - MGP_NODShiLtJ_P0076487 Chchd3 protein_coding protein_coding MGP_NODShiLtJ_T0076488.1 MGP_NODShiLtJ_G0030360.1 mouse_genomes_project 6 35227076 35446964 - MGP_NODShiLtJ_P0076488 Chchd3 protein_coding protein_coding MGP_NODShiLtJ_T0079940.1 MGP_NODShiLtJ_G0031120.1 mouse_genomes_project 6 143119991 143147096 - MGP_NODShiLtJ_P0079940 Ccnd2 protein_coding protein_coding MGP_NODShiLtJ_T0079941.1 MGP_NODShiLtJ_G0031120.1 mouse_genomes_project 6 143125384 143135157 - Ccnd2 protein_coding processed_transcript MGP_NODShiLtJ_T0079942.1 MGP_NODShiLtJ_G0031120.1 mouse_genomes_project 6 143135097 143142692 - Ccnd2 protein_coding processed_transcript MGP_NODShiLtJ_T0079943.1 MGP_NODShiLtJ_G0031120.1 mouse_genomes_project 6 143142026 143150076 - MGP_NODShiLtJ_P0079943 Ccnd2 protein_coding protein_coding MGP_NODShiLtJ_T0079944.1 MGP_NODShiLtJ_G0031120.1 mouse_genomes_project 6 143143505 143147043 - Ccnd2 protein_coding retained_intron MGP_NODShiLtJ_T0079945.1 MGP_NODShiLtJ_G0031120.1 mouse_genomes_project 6 143144287 143147069 - MGP_NODShiLtJ_P0079945 Ccnd2 protein_coding protein_coding MGP_NODShiLtJ_T0079946.1 MGP_NODShiLtJ_G0031120.1 mouse_genomes_project 6 143144304 143147043 - MGP_NODShiLtJ_P0079946 Ccnd2 protein_coding protein_coding MGP_NODShiLtJ_T0079947.1 MGP_NODShiLtJ_G0031120.1 mouse_genomes_project 6 143146817 143146997 - Ccnd2 protein_coding processed_transcript MGP_NODShiLtJ_T0005012.1 MGP_NODShiLtJ_G0004272.1 mouse_genomes_project 6 130032774 130048897 - Gm44079 antisense antisense MGP_NODShiLtJ_T0080637.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165295236 165300263 - MGP_NODShiLtJ_P0080637 Asun protein_coding protein_coding MGP_NODShiLtJ_T0080638.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165295236 165304071 - MGP_NODShiLtJ_P0080638 Asun protein_coding protein_coding MGP_NODShiLtJ_T0080639.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165295236 165332970 - MGP_NODShiLtJ_P0080639 Asun protein_coding protein_coding MGP_NODShiLtJ_T0080640.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165295245 165296984 - Asun protein_coding retained_intron MGP_NODShiLtJ_T0080641.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165295535 165296006 - Asun protein_coding retained_intron MGP_NODShiLtJ_T0080642.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165295698 165299663 - Asun protein_coding retained_intron MGP_NODShiLtJ_T0080643.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165298110 165302983 - Asun protein_coding processed_transcript MGP_NODShiLtJ_T0080644.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165299709 165300432 - Asun protein_coding retained_intron MGP_NODShiLtJ_T0080645.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165300623 165331398 - MGP_NODShiLtJ_P0080645 Asun protein_coding protein_coding MGP_NODShiLtJ_T0080646.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165309677 165313965 - Asun protein_coding retained_intron MGP_NODShiLtJ_T0080647.1 MGP_NODShiLtJ_G0031298.1 mouse_genomes_project 6 165328271 165332915 - Asun protein_coding retained_intron MGP_NODShiLtJ_T0075814.1 MGP_NODShiLtJ_G0030232.1 mouse_genomes_project 6 836097 839707 + MGP_NODShiLtJ_P0075814 Gngt1 protein_coding protein_coding MGP_NODShiLtJ_T0075815.1 MGP_NODShiLtJ_G0030232.1 mouse_genomes_project 6 836102 839202 + Gngt1 protein_coding retained_intron MGP_NODShiLtJ_T0077016.1 MGP_NODShiLtJ_G0030500.1 mouse_genomes_project 6 53451200 53467295 + MGP_NODShiLtJ_P0077016 Lrrc61 protein_coding protein_coding MGP_NODShiLtJ_T0077017.1 MGP_NODShiLtJ_G0030500.1 mouse_genomes_project 6 53451203 53464939 + MGP_NODShiLtJ_P0077017 Lrrc61 protein_coding protein_coding MGP_NODShiLtJ_T0077018.1 MGP_NODShiLtJ_G0030500.1 mouse_genomes_project 6 53451203 53464959 + MGP_NODShiLtJ_P0077018 Lrrc61 protein_coding protein_coding MGP_NODShiLtJ_T0077019.1 MGP_NODShiLtJ_G0030500.1 mouse_genomes_project 6 53451209 53467294 + MGP_NODShiLtJ_P0077019 Lrrc61 protein_coding protein_coding MGP_NODShiLtJ_T0077020.1 MGP_NODShiLtJ_G0030500.1 mouse_genomes_project 6 53451215 53464834 + Lrrc61 protein_coding processed_transcript MGP_NODShiLtJ_T0077021.1 MGP_NODShiLtJ_G0030500.1 mouse_genomes_project 6 53451233 53465142 + MGP_NODShiLtJ_P0077021 Lrrc61 protein_coding protein_coding MGP_NODShiLtJ_T0100688.1 MGP_NODShiLtJ_G0039082.1 mouse_genomes_project 6 92721044 92721162 + Gm22530 snoRNA snoRNA MGP_NODShiLtJ_T0080080.1 MGP_NODShiLtJ_G0031155.1 mouse_genomes_project 6 145813111 145843136 - MGP_NODShiLtJ_P0080080 Clec1a protein_coding protein_coding MGP_NODShiLtJ_T0080081.1 MGP_NODShiLtJ_G0031155.1 mouse_genomes_project 6 145815257 145842992 - MGP_NODShiLtJ_P0080081 Clec1a protein_coding protein_coding MGP_NODShiLtJ_T0080082.1 MGP_NODShiLtJ_G0031155.1 mouse_genomes_project 6 145816306 145843128 - MGP_NODShiLtJ_P0080082 Clec1a protein_coding protein_coding MGP_NODShiLtJ_T0080083.1 MGP_NODShiLtJ_G0031155.1 mouse_genomes_project 6 145816377 145843112 - MGP_NODShiLtJ_P0080083 Clec1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002063.1 MGP_NODShiLtJ_G0001975.1 mouse_genomes_project 6 113842852 113843740 - TEC TEC MGP_NODShiLtJ_T0079117.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130217336 130233856 - Raf1 protein_coding retained_intron MGP_NODShiLtJ_T0079118.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130217838 130277231 - MGP_NODShiLtJ_P0079118 Raf1 protein_coding protein_coding MGP_NODShiLtJ_T0079119.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130217838 130277902 - MGP_NODShiLtJ_P0079119 Raf1 protein_coding protein_coding MGP_NODShiLtJ_T0079120.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130217866 130221095 - MGP_NODShiLtJ_P0079120 Raf1 protein_coding protein_coding MGP_NODShiLtJ_T0079121.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130218510 130219588 - Raf1 protein_coding retained_intron MGP_NODShiLtJ_T0079122.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130218863 130222814 - MGP_NODShiLtJ_P0079122 Raf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079123.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130219534 130229961 - Raf1 protein_coding retained_intron MGP_NODShiLtJ_T0079124.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130221085 130226299 - Raf1 protein_coding retained_intron MGP_NODShiLtJ_T0079125.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130221095 130226337 - Raf1 protein_coding retained_intron MGP_NODShiLtJ_T0079126.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130222792 130232230 - MGP_NODShiLtJ_P0079126 Raf1 protein_coding protein_coding MGP_NODShiLtJ_T0079127.1 MGP_NODShiLtJ_G0030959.1 mouse_genomes_project 6 130229432 130277902 - Raf1 protein_coding retained_intron MGP_NODShiLtJ_T0015241.1 MGP_NODShiLtJ_G0013349.1 mouse_genomes_project 6 63306034 63306287 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076914.1 MGP_NODShiLtJ_G0030481.1 mouse_genomes_project 6 46904534 46907019 + MGP_NODShiLtJ_P0076914 Olfr47 protein_coding protein_coding MGP_NODShiLtJ_T0076971.1 MGP_NODShiLtJ_G0030492.1 mouse_genomes_project 6 52745334 52757653 + MGP_NODShiLtJ_P0076971 Zfp212 protein_coding protein_coding MGP_NODShiLtJ_T0076972.1 MGP_NODShiLtJ_G0030492.1 mouse_genomes_project 6 52751154 52751995 + Zfp212 protein_coding retained_intron MGP_NODShiLtJ_T0015325.1 MGP_NODShiLtJ_G0013433.1 mouse_genomes_project 6 88185230 88186250 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077798.1 MGP_NODShiLtJ_G0030699.1 mouse_genomes_project 6 88345427 88346873 + MGP_NODShiLtJ_P0077798 Gm5580 protein_coding protein_coding MGP_NODShiLtJ_T0002072.1 MGP_NODShiLtJ_G0001984.1 mouse_genomes_project 6 126482667 126483223 - TEC TEC MGP_NODShiLtJ_T0079881.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141404223 141452098 + MGP_NODShiLtJ_P0079881 Vwf protein_coding protein_coding MGP_NODShiLtJ_T0079882.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141411408 141550498 + MGP_NODShiLtJ_P0079882 Vwf protein_coding protein_coding MGP_NODShiLtJ_T0079883.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141411423 141466101 + Vwf protein_coding retained_intron MGP_NODShiLtJ_T0079884.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141411423 141452395 + MGP_NODShiLtJ_P0079884 Vwf protein_coding protein_coding MGP_NODShiLtJ_T0079885.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141424793 141438499 + Vwf protein_coding processed_transcript MGP_NODShiLtJ_T0079886.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141464874 141507149 + Vwf protein_coding processed_transcript MGP_NODShiLtJ_T0079887.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141499032 141501302 + Vwf protein_coding retained_intron MGP_NODShiLtJ_T0079888.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141510563 141526191 + Vwf protein_coding retained_intron MGP_NODShiLtJ_T0079889.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141513493 141550491 + MGP_NODShiLtJ_P0079889 Vwf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079890.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141519155 141520852 + Vwf protein_coding retained_intron MGP_NODShiLtJ_T0079891.1 MGP_NODShiLtJ_G0031106.1 mouse_genomes_project 6 141549555 141550454 + Vwf protein_coding processed_transcript MGP_NODShiLtJ_T0077759.1 MGP_NODShiLtJ_G0030690.1 mouse_genomes_project 6 81536611 81544742 - MGP_NODShiLtJ_P0077759 Tgoln1 protein_coding protein_coding MGP_NODShiLtJ_T0079981.1 MGP_NODShiLtJ_G0031128.1 mouse_genomes_project 6 144459681 144465496 - MGP_NODShiLtJ_P0079981 protein_coding protein_coding MGP_NODShiLtJ_T0079982.1 MGP_NODShiLtJ_G0031128.1 mouse_genomes_project 6 144460041 144465552 - MGP_NODShiLtJ_P0079982 protein_coding protein_coding MGP_NODShiLtJ_T0079983.1 MGP_NODShiLtJ_G0031128.1 mouse_genomes_project 6 144460046 144465552 - MGP_NODShiLtJ_P0079983 protein_coding protein_coding MGP_NODShiLtJ_T0079984.1 MGP_NODShiLtJ_G0031128.1 mouse_genomes_project 6 144460652 144465262 - MGP_NODShiLtJ_P0079984 protein_coding protein_coding MGP_NODShiLtJ_T0079985.1 MGP_NODShiLtJ_G0031128.1 mouse_genomes_project 6 144461915 144465379 - MGP_NODShiLtJ_P0079985 protein_coding protein_coding MGP_NODShiLtJ_T0079986.1 MGP_NODShiLtJ_G0031128.1 mouse_genomes_project 6 144464562 144465595 - protein_coding processed_transcript MGP_NODShiLtJ_T0076031.1 MGP_NODShiLtJ_G0030276.1 mouse_genomes_project 6 16649658 16651016 + MGP_NODShiLtJ_P0076031 Cav2 protein_coding protein_coding MGP_NODShiLtJ_T0076032.1 MGP_NODShiLtJ_G0030276.1 mouse_genomes_project 6 16649690 16655770 + MGP_NODShiLtJ_P0076032 Cav2 protein_coding protein_coding MGP_NODShiLtJ_T0002056.1 MGP_NODShiLtJ_G0001968.1 mouse_genomes_project 6 113089699 113091224 - TEC TEC MGP_NODShiLtJ_T0015227.1 MGP_NODShiLtJ_G0013335.1 mouse_genomes_project 6 55687006 55687378 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080362.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155540253 155572810 + Dera protein_coding retained_intron MGP_NODShiLtJ_T0080363.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155540253 155548629 + Dera protein_coding processed_transcript MGP_NODShiLtJ_T0080364.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155540263 155632942 + MGP_NODShiLtJ_P0080364 Dera protein_coding protein_coding MGP_NODShiLtJ_T0080365.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155540265 155633379 + MGP_NODShiLtJ_P0080365 Dera protein_coding protein_coding MGP_NODShiLtJ_T0080366.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155540283 155654838 + MGP_NODShiLtJ_P0080366 Dera protein_coding protein_coding MGP_NODShiLtJ_T0080367.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155540298 155553007 + Dera protein_coding processed_transcript MGP_NODShiLtJ_T0080368.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155540322 155632921 + MGP_NODShiLtJ_P0080368 Dera protein_coding protein_coding MGP_NODShiLtJ_T0080369.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155548332 155548630 + Dera protein_coding TEC MGP_NODShiLtJ_T0080370.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155563030 155573635 + Dera protein_coding processed_transcript MGP_NODShiLtJ_T0080371.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155568650 155570315 + Dera protein_coding retained_intron MGP_NODShiLtJ_T0080372.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155571480 155632968 + MGP_NODShiLtJ_P0080372 Dera protein_coding protein_coding MGP_NODShiLtJ_T0080373.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155588712 155601550 + Dera protein_coding processed_transcript MGP_NODShiLtJ_T0080374.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155622474 155654312 + MGP_NODShiLtJ_P0080374 Dera protein_coding protein_coding MGP_NODShiLtJ_T0080375.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155629376 155633565 + Dera protein_coding retained_intron MGP_NODShiLtJ_T0080376.1 MGP_NODShiLtJ_G0031250.1 mouse_genomes_project 6 155632336 155639186 + MGP_NODShiLtJ_P0080376 Dera protein_coding protein_coding MGP_NODShiLtJ_T0005059.1 MGP_NODShiLtJ_G0004313.1 mouse_genomes_project 6 161108097 161119971 + 5330439B14Rik antisense antisense MGP_NODShiLtJ_T0100673.1 MGP_NODShiLtJ_G0039067.1 mouse_genomes_project 6 63572490 63572619 - Gm25726 snoRNA snoRNA MGP_NODShiLtJ_T0002644.1 MGP_NODShiLtJ_G0002524.1 mouse_genomes_project 6 44593244 44593733 + MGP_NODShiLtJ_P0002644 Trbv26 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002645.1 MGP_NODShiLtJ_G0002524.1 mouse_genomes_project 6 44593264 44593733 + MGP_NODShiLtJ_P0002645 Trbv26 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002125.1 MGP_NODShiLtJ_G0002037.1 mouse_genomes_project 6 158541787 158542457 + TEC TEC MGP_NODShiLtJ_T0004968.1 MGP_NODShiLtJ_G0004243.1 mouse_genomes_project 6 99682170 99685247 - 1700031F10Rik antisense antisense MGP_NODShiLtJ_T0004969.1 MGP_NODShiLtJ_G0004243.1 mouse_genomes_project 6 99682172 99683208 - 1700031F10Rik antisense antisense MGP_NODShiLtJ_T0002064.1 MGP_NODShiLtJ_G0001976.1 mouse_genomes_project 6 114073284 114075393 + TEC TEC MGP_NODShiLtJ_T0079936.1 MGP_NODShiLtJ_G0031117.1 mouse_genomes_project 6 143009149 143022849 + MGP_NODShiLtJ_P0079936 Fgf6 protein_coding protein_coding MGP_NODShiLtJ_T0102008.1 MGP_NODShiLtJ_G0040176.1 mouse_genomes_project 6 64502493 64502788 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0076418.1 MGP_NODShiLtJ_G0030348.1 mouse_genomes_project 6 32820689 32845768 + MGP_NODShiLtJ_P0076418 Cpa4 protein_coding protein_coding MGP_NODShiLtJ_T0000283.1 MGP_NODShiLtJ_G0000221.1 mouse_genomes_project 6 76006193 76006446 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0078302.1 MGP_NODShiLtJ_G0030801.1 mouse_genomes_project 6 99157841 99161013 + Efcc1 protein_coding retained_intron MGP_NODShiLtJ_T0078303.1 MGP_NODShiLtJ_G0030801.1 mouse_genomes_project 6 99157841 99182436 + MGP_NODShiLtJ_P0078303 Efcc1 protein_coding protein_coding MGP_NODShiLtJ_T0078304.1 MGP_NODShiLtJ_G0030801.1 mouse_genomes_project 6 99157865 99182882 + MGP_NODShiLtJ_P0078304 Efcc1 protein_coding protein_coding MGP_NODShiLtJ_T0078305.1 MGP_NODShiLtJ_G0030801.1 mouse_genomes_project 6 99159781 99178885 + Efcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0078306.1 MGP_NODShiLtJ_G0030801.1 mouse_genomes_project 6 99180506 99181747 + Efcc1 protein_coding retained_intron MGP_NODShiLtJ_T0080155.1 MGP_NODShiLtJ_G0031183.1 mouse_genomes_project 6 148431397 148432429 - MGP_NODShiLtJ_P0080155 Tas2r107 protein_coding protein_coding MGP_NODShiLtJ_T0080564.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163654796 163713830 - MGP_NODShiLtJ_P0080564 Bcat1 protein_coding protein_coding MGP_NODShiLtJ_T0080565.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163660173 163749898 - MGP_NODShiLtJ_P0080565 Bcat1 protein_coding protein_coding MGP_NODShiLtJ_T0080566.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163666265 163749898 - MGP_NODShiLtJ_P0080566 Bcat1 protein_coding protein_coding MGP_NODShiLtJ_T0080567.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163666545 163699612 - Bcat1 protein_coding processed_transcript MGP_NODShiLtJ_T0080568.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163670191 163713628 - MGP_NODShiLtJ_P0080568 Bcat1 protein_coding protein_coding MGP_NODShiLtJ_T0080569.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163678998 163695368 - MGP_NODShiLtJ_P0080569 Bcat1 protein_coding protein_coding MGP_NODShiLtJ_T0080570.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163682430 163712873 - MGP_NODShiLtJ_P0080570 Bcat1 protein_coding protein_coding MGP_NODShiLtJ_T0080571.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163695314 163705885 - Bcat1 protein_coding processed_transcript MGP_NODShiLtJ_T0080572.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163695333 163712681 - MGP_NODShiLtJ_P0080572 Bcat1 protein_coding protein_coding MGP_NODShiLtJ_T0080573.1 MGP_NODShiLtJ_G0031287.1 mouse_genomes_project 6 163695397 163705997 - Bcat1 protein_coding processed_transcript MGP_NODShiLtJ_T0079345.1 MGP_NODShiLtJ_G0030999.1 mouse_genomes_project 6 134330403 134346773 - MGP_NODShiLtJ_P0079345 Wnt5b protein_coding protein_coding MGP_NODShiLtJ_T0079346.1 MGP_NODShiLtJ_G0030999.1 mouse_genomes_project 6 134330412 134456716 - MGP_NODShiLtJ_P0079346 Wnt5b protein_coding protein_coding MGP_NODShiLtJ_T0076640.1 MGP_NODShiLtJ_G0030389.1 mouse_genomes_project 6 41108949 41115262 + MGP_NODShiLtJ_P0076640 Tmem213 protein_coding protein_coding MGP_NODShiLtJ_T0018140.1 MGP_NODShiLtJ_G0015508.1 mouse_genomes_project 6 107210359 107294870 - AY512915 processed_transcript antisense MGP_NODShiLtJ_T0018141.1 MGP_NODShiLtJ_G0015508.1 mouse_genomes_project 6 107231741 107294857 - AY512915 processed_transcript antisense MGP_NODShiLtJ_T0018142.1 MGP_NODShiLtJ_G0015508.1 mouse_genomes_project 6 107249549 107294872 - AY512915 processed_transcript lincRNA MGP_NODShiLtJ_T0018143.1 MGP_NODShiLtJ_G0015508.1 mouse_genomes_project 6 107272381 107294850 - AY512915 processed_transcript antisense MGP_NODShiLtJ_T0018144.1 MGP_NODShiLtJ_G0015508.1 mouse_genomes_project 6 107286181 107294856 - AY512915 processed_transcript processed_transcript MGP_NODShiLtJ_T0015464.1 MGP_NODShiLtJ_G0013572.1 mouse_genomes_project 6 141015483 141016712 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002002.1 MGP_NODShiLtJ_G0001914.1 mouse_genomes_project 6 97353294 97355094 + TEC TEC MGP_NODShiLtJ_T0079652.1 MGP_NODShiLtJ_G0031067.1 mouse_genomes_project 6 140485639 140487174 + Phb2 protein_coding retained_intron MGP_NODShiLtJ_T0079653.1 MGP_NODShiLtJ_G0031067.1 mouse_genomes_project 6 140485639 140486372 + Phb2 protein_coding retained_intron MGP_NODShiLtJ_T0079654.1 MGP_NODShiLtJ_G0031067.1 mouse_genomes_project 6 140485639 140490252 + Phb2 protein_coding retained_intron MGP_NODShiLtJ_T0079655.1 MGP_NODShiLtJ_G0031067.1 mouse_genomes_project 6 140485639 140490252 + MGP_NODShiLtJ_P0079655 Phb2 protein_coding protein_coding MGP_NODShiLtJ_T0079656.1 MGP_NODShiLtJ_G0031067.1 mouse_genomes_project 6 140486069 140488104 + MGP_NODShiLtJ_P0079656 Phb2 protein_coding protein_coding MGP_NODShiLtJ_T0079657.1 MGP_NODShiLtJ_G0031067.1 mouse_genomes_project 6 140486425 140489942 + MGP_NODShiLtJ_P0079657 Phb2 protein_coding protein_coding MGP_NODShiLtJ_T0079658.1 MGP_NODShiLtJ_G0031067.1 mouse_genomes_project 6 140488649 140490252 + Phb2 protein_coding retained_intron MGP_NODShiLtJ_T0079659.1 MGP_NODShiLtJ_G0031067.1 mouse_genomes_project 6 140488664 140489841 + Phb2 protein_coding processed_transcript MGP_NODShiLtJ_T0098059.1 MGP_NODShiLtJ_G0036471.1 mouse_genomes_project 6 11089604 11089724 + n-R5s160 rRNA rRNA MGP_NODShiLtJ_T0078645.1 MGP_NODShiLtJ_G0030871.1 mouse_genomes_project 6 106399343 106512624 + MGP_NODShiLtJ_P0078645 Slc25a26 protein_coding protein_coding MGP_NODShiLtJ_T0078646.1 MGP_NODShiLtJ_G0030871.1 mouse_genomes_project 6 106399345 106512006 + MGP_NODShiLtJ_P0078646 Slc25a26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078647.1 MGP_NODShiLtJ_G0030871.1 mouse_genomes_project 6 106399381 106512624 + MGP_NODShiLtJ_P0078647 Slc25a26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078648.1 MGP_NODShiLtJ_G0030871.1 mouse_genomes_project 6 106399561 106409846 + Slc25a26 protein_coding processed_transcript MGP_NODShiLtJ_T0078649.1 MGP_NODShiLtJ_G0030871.1 mouse_genomes_project 6 106406563 106503225 + MGP_NODShiLtJ_P0078649 Slc25a26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078650.1 MGP_NODShiLtJ_G0030871.1 mouse_genomes_project 6 106433922 106511814 + Slc25a26 protein_coding processed_transcript MGP_NODShiLtJ_T0078651.1 MGP_NODShiLtJ_G0030871.1 mouse_genomes_project 6 106482870 106511534 + Slc25a26 protein_coding processed_transcript MGP_NODShiLtJ_T0015174.1 MGP_NODShiLtJ_G0013282.1 mouse_genomes_project 6 37367333 37367530 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079060.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168593 129396724 + MGP_NODShiLtJ_P0079060 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079061.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168608 129396722 + MGP_NODShiLtJ_P0079061 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079062.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168612 129210899 + Atg7 protein_coding retained_intron MGP_NODShiLtJ_T0079063.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168614 129203797 + MGP_NODShiLtJ_P0079063 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079064.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168618 129395253 + MGP_NODShiLtJ_P0079064 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079065.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168623 129198587 + MGP_NODShiLtJ_P0079065 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079066.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168623 129395344 + MGP_NODShiLtJ_P0079066 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079067.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168625 129395353 + MGP_NODShiLtJ_P0079067 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079068.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168625 129395347 + MGP_NODShiLtJ_P0079068 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079069.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129168627 129212218 + MGP_NODShiLtJ_P0079069 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079070.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129174317 129210503 + MGP_NODShiLtJ_P0079070 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079071.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129177909 129212201 + MGP_NODShiLtJ_P0079071 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079072.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129183514 129199185 + MGP_NODShiLtJ_P0079072 Atg7 protein_coding protein_coding MGP_NODShiLtJ_T0079073.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129206140 129227815 + Atg7 protein_coding processed_transcript MGP_NODShiLtJ_T0079074.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129209269 129211490 + Atg7 protein_coding retained_intron MGP_NODShiLtJ_T0079075.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129250181 129395347 + Atg7 protein_coding processed_transcript MGP_NODShiLtJ_T0079076.1 MGP_NODShiLtJ_G0030949.1 mouse_genomes_project 6 129392273 129395345 + Atg7 protein_coding processed_transcript MGP_NODShiLtJ_T0076190.1 MGP_NODShiLtJ_G0030311.1 mouse_genomes_project 6 26841959 26877810 - MGP_NODShiLtJ_P0076190 Gpr37 protein_coding protein_coding MGP_NODShiLtJ_T0076191.1 MGP_NODShiLtJ_G0030311.1 mouse_genomes_project 6 26845678 26878747 - MGP_NODShiLtJ_P0076191 Gpr37 protein_coding protein_coding MGP_NODShiLtJ_T0077432.1 MGP_NODShiLtJ_G0030611.1 mouse_genomes_project 6 63640920 63644316 - MGP_NODShiLtJ_P0077432 Vmn1r22 protein_coding protein_coding MGP_NODShiLtJ_T0079592.1 MGP_NODShiLtJ_G0031048.1 mouse_genomes_project 6 138745950 138758754 + MGP_NODShiLtJ_P0079592 Clec4d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079593.1 MGP_NODShiLtJ_G0031048.1 mouse_genomes_project 6 138745956 138759096 + MGP_NODShiLtJ_P0079593 Clec4d protein_coding protein_coding MGP_NODShiLtJ_T0079594.1 MGP_NODShiLtJ_G0031048.1 mouse_genomes_project 6 138751560 138758543 + Clec4d protein_coding retained_intron MGP_NODShiLtJ_T0002022.1 MGP_NODShiLtJ_G0001934.1 mouse_genomes_project 6 99439244 99440288 - TEC TEC MGP_NODShiLtJ_T0101987.1 MGP_NODShiLtJ_G0040155.1 mouse_genomes_project 6 46268129 46268477 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002146.1 MGP_NODShiLtJ_G0002058.1 mouse_genomes_project 6 168610397 168613650 + TEC TEC MGP_NODShiLtJ_T0015182.1 MGP_NODShiLtJ_G0013290.1 mouse_genomes_project 6 41396918 41401198 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005029.1 MGP_NODShiLtJ_G0004288.1 mouse_genomes_project 6 142686088 142710401 + Gm26673 antisense antisense MGP_NODShiLtJ_T0001989.1 MGP_NODShiLtJ_G0001901.1 mouse_genomes_project 6 90958406 90960162 + TEC TEC MGP_NODShiLtJ_T0075928.1 MGP_NODShiLtJ_G0030258.1 mouse_genomes_project 6 5554698 5953469 + MGP_NODShiLtJ_P0075928 Gm45062 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077923.1 MGP_NODShiLtJ_G0030730.1 mouse_genomes_project 6 94141642 94145314 - MGP_NODShiLtJ_P0077923 Ino80b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077924.1 MGP_NODShiLtJ_G0030730.1 mouse_genomes_project 6 94141642 94145314 - MGP_NODShiLtJ_P0077924 Ino80b protein_coding protein_coding MGP_NODShiLtJ_T0077925.1 MGP_NODShiLtJ_G0030730.1 mouse_genomes_project 6 94141705 94144912 - MGP_NODShiLtJ_P0077925 Ino80b protein_coding protein_coding MGP_NODShiLtJ_T0077926.1 MGP_NODShiLtJ_G0030730.1 mouse_genomes_project 6 94144295 94144751 - Ino80b protein_coding retained_intron MGP_NODShiLtJ_T0015484.1 MGP_NODShiLtJ_G0013592.1 mouse_genomes_project 6 144935367 144935484 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077956.1 MGP_NODShiLtJ_G0030735.1 mouse_genomes_project 6 94250670 94331683 + MGP_NODShiLtJ_P0077956 Slc4a5 protein_coding protein_coding MGP_NODShiLtJ_T0077957.1 MGP_NODShiLtJ_G0030735.1 mouse_genomes_project 6 94263150 94289465 + Slc4a5 protein_coding processed_transcript MGP_NODShiLtJ_T0077958.1 MGP_NODShiLtJ_G0030735.1 mouse_genomes_project 6 94263335 94336123 + MGP_NODShiLtJ_P0077958 Slc4a5 protein_coding protein_coding MGP_NODShiLtJ_T0077959.1 MGP_NODShiLtJ_G0030735.1 mouse_genomes_project 6 94308041 94319623 + Slc4a5 protein_coding processed_transcript MGP_NODShiLtJ_T0077960.1 MGP_NODShiLtJ_G0030735.1 mouse_genomes_project 6 94318804 94327923 + Slc4a5 protein_coding processed_transcript MGP_NODShiLtJ_T0080506.1 MGP_NODShiLtJ_G0031277.1 mouse_genomes_project 6 160886113 160935071 - MGP_NODShiLtJ_P0080506 Gys2 protein_coding protein_coding MGP_NODShiLtJ_T0080507.1 MGP_NODShiLtJ_G0031277.1 mouse_genomes_project 6 160886117 160887119 - MGP_NODShiLtJ_P0080507 Gys2 protein_coding protein_coding MGP_NODShiLtJ_T0002011.1 MGP_NODShiLtJ_G0001923.1 mouse_genomes_project 6 98528411 98530533 - TEC TEC MGP_NODShiLtJ_T0015266.1 MGP_NODShiLtJ_G0013374.1 mouse_genomes_project 6 72867741 72868630 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015431.1 MGP_NODShiLtJ_G0013539.1 mouse_genomes_project 6 131156318 131156838 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076828.1 MGP_NODShiLtJ_G0030446.1 mouse_genomes_project 6 45548227 45556344 + MGP_NODShiLtJ_P0076828 Sva protein_coding protein_coding MGP_NODShiLtJ_T0076829.1 MGP_NODShiLtJ_G0030446.1 mouse_genomes_project 6 45548227 45556350 + MGP_NODShiLtJ_P0076829 Sva protein_coding protein_coding MGP_NODShiLtJ_T0001994.1 MGP_NODShiLtJ_G0001906.1 mouse_genomes_project 6 92808449 92809965 - TEC TEC MGP_NODShiLtJ_T0002041.1 MGP_NODShiLtJ_G0001953.1 mouse_genomes_project 6 103358825 103360768 - TEC TEC MGP_NODShiLtJ_T0076859.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861335 45862854 + MGP_NODShiLtJ_P0076859 Zyx protein_coding protein_coding MGP_NODShiLtJ_T0076860.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861485 45863313 + MGP_NODShiLtJ_P0076860 Zyx protein_coding protein_coding MGP_NODShiLtJ_T0076861.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861533 45870256 + MGP_NODShiLtJ_P0076861 Zyx protein_coding protein_coding MGP_NODShiLtJ_T0076862.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861574 45870086 + MGP_NODShiLtJ_P0076862 Zyx protein_coding protein_coding MGP_NODShiLtJ_T0076863.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861738 45870086 + Zyx protein_coding retained_intron MGP_NODShiLtJ_T0076864.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861738 45870086 + MGP_NODShiLtJ_P0076864 Zyx protein_coding protein_coding MGP_NODShiLtJ_T0076865.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861743 45863470 + Zyx protein_coding processed_transcript MGP_NODShiLtJ_T0076866.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861744 45871907 + MGP_NODShiLtJ_P0076866 Zyx protein_coding protein_coding MGP_NODShiLtJ_T0076867.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45861776 45862770 + MGP_NODShiLtJ_P0076867 Zyx protein_coding protein_coding MGP_NODShiLtJ_T0076868.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45865183 45867731 + Zyx protein_coding processed_transcript MGP_NODShiLtJ_T0076869.1 MGP_NODShiLtJ_G0030454.1 mouse_genomes_project 6 45866830 45867955 + Zyx protein_coding processed_transcript MGP_NODShiLtJ_T0008677.1 MGP_NODShiLtJ_G0007003.1 mouse_genomes_project 6 152806117 152814037 - Gm44275 lincRNA lincRNA MGP_NODShiLtJ_T0008499.1 MGP_NODShiLtJ_G0006863.1 mouse_genomes_project 6 42394687 42397115 + Gm43479 lincRNA lincRNA MGP_NODShiLtJ_T0102041.1 MGP_NODShiLtJ_G0040208.1 mouse_genomes_project 6 149847460 149848451 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000157.1 MGP_NODShiLtJ_G0000115.1 mouse_genomes_project 6 76107520 76107818 + MGP_NODShiLtJ_P0000157 Igkv9-129 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000158.1 MGP_NODShiLtJ_G0000115.1 mouse_genomes_project 6 76107523 76107818 + MGP_NODShiLtJ_P0000158 Igkv9-129 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0008450.1 MGP_NODShiLtJ_G0006834.1 mouse_genomes_project 6 27190164 27252497 + lincRNA lincRNA MGP_NODShiLtJ_T0080481.1 MGP_NODShiLtJ_G0031272.1 mouse_genomes_project 6 160761473 160766995 + MGP_NODShiLtJ_P0080481 Iapp protein_coding protein_coding MGP_NODShiLtJ_T0080482.1 MGP_NODShiLtJ_G0031272.1 mouse_genomes_project 6 160761497 160762118 + Iapp protein_coding processed_transcript MGP_NODShiLtJ_T0080513.1 MGP_NODShiLtJ_G0031280.1 mouse_genomes_project 6 161079558 161199821 - MGP_NODShiLtJ_P0080513 Abcc9 protein_coding protein_coding MGP_NODShiLtJ_T0080514.1 MGP_NODShiLtJ_G0031280.1 mouse_genomes_project 6 161079558 161199765 - MGP_NODShiLtJ_P0080514 Abcc9 protein_coding protein_coding MGP_NODShiLtJ_T0080515.1 MGP_NODShiLtJ_G0031280.1 mouse_genomes_project 6 161079558 161199821 - MGP_NODShiLtJ_P0080515 Abcc9 protein_coding protein_coding MGP_NODShiLtJ_T0080516.1 MGP_NODShiLtJ_G0031280.1 mouse_genomes_project 6 161080821 161199765 - MGP_NODShiLtJ_P0080516 Abcc9 protein_coding protein_coding MGP_NODShiLtJ_T0080517.1 MGP_NODShiLtJ_G0031280.1 mouse_genomes_project 6 161087264 161199820 - MGP_NODShiLtJ_P0080517 Abcc9 protein_coding protein_coding MGP_NODShiLtJ_T0080518.1 MGP_NODShiLtJ_G0031280.1 mouse_genomes_project 6 161188487 161199862 - MGP_NODShiLtJ_P0080518 Abcc9 protein_coding protein_coding MGP_NODShiLtJ_T0010660.1 MGP_NODShiLtJ_G0008793.1 mouse_genomes_project 6 52877940 52878033 + Gm24563 miRNA miRNA MGP_NODShiLtJ_T0000201.1 MGP_NODShiLtJ_G0000146.1 mouse_genomes_project 6 78683657 78684166 - MGP_NODShiLtJ_P0000201 Igkv18-36 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000202.1 MGP_NODShiLtJ_G0000146.1 mouse_genomes_project 6 78683657 78684166 - MGP_NODShiLtJ_P0000202 Igkv18-36 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0078174.1 MGP_NODShiLtJ_G0030776.1 mouse_genomes_project 6 97518485 97600777 + MGP_NODShiLtJ_P0078174 Tgfa protein_coding protein_coding MGP_NODShiLtJ_T0078175.1 MGP_NODShiLtJ_G0030776.1 mouse_genomes_project 6 97518513 97533161 + Tgfa protein_coding processed_transcript MGP_NODShiLtJ_T0078176.1 MGP_NODShiLtJ_G0030776.1 mouse_genomes_project 6 97518652 97597083 + MGP_NODShiLtJ_P0078176 Tgfa protein_coding protein_coding MGP_NODShiLtJ_T0078177.1 MGP_NODShiLtJ_G0030776.1 mouse_genomes_project 6 97534830 97597273 + Tgfa protein_coding processed_transcript MGP_NODShiLtJ_T0076910.1 MGP_NODShiLtJ_G0030478.1 mouse_genomes_project 6 46829448 46830502 + MGP_NODShiLtJ_P0076910 Olfr13 protein_coding protein_coding MGP_NODShiLtJ_T0099438.1 MGP_NODShiLtJ_G0037832.1 mouse_genomes_project 6 92543413 92543572 + Gm26264 snRNA snRNA MGP_NODShiLtJ_T0015450.1 MGP_NODShiLtJ_G0013558.1 mouse_genomes_project 6 137486989 137487121 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077303.1 MGP_NODShiLtJ_G0030568.1 mouse_genomes_project 6 60058488 60081537 + MGP_NODShiLtJ_P0077303 Mturn protein_coding protein_coding MGP_NODShiLtJ_T0077304.1 MGP_NODShiLtJ_G0030568.1 mouse_genomes_project 6 60058618 60078828 + MGP_NODShiLtJ_P0077304 Mturn protein_coding protein_coding MGP_NODShiLtJ_T0077305.1 MGP_NODShiLtJ_G0030568.1 mouse_genomes_project 6 60058666 60066386 + Mturn protein_coding retained_intron MGP_NODShiLtJ_T0077098.1 MGP_NODShiLtJ_G0030521.1 mouse_genomes_project 6 53899186 53902970 + MGP_NODShiLtJ_P0077098 Doxl2 protein_coding protein_coding MGP_NODShiLtJ_T0077099.1 MGP_NODShiLtJ_G0030521.1 mouse_genomes_project 6 53899297 53902971 + MGP_NODShiLtJ_P0077099 Doxl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077100.1 MGP_NODShiLtJ_G0030521.1 mouse_genomes_project 6 53901458 53902968 + Doxl2 protein_coding retained_intron MGP_NODShiLtJ_T0076164.1 MGP_NODShiLtJ_G0030299.1 mouse_genomes_project 6 24850422 24851322 - MGP_NODShiLtJ_P0076164 Tas2r118 protein_coding protein_coding MGP_NODShiLtJ_T0015517.1 MGP_NODShiLtJ_G0013625.1 mouse_genomes_project 6 154050513 154050907 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010665.1 MGP_NODShiLtJ_G0008798.1 mouse_genomes_project 6 57436371 57436456 - Mir196b miRNA miRNA MGP_NODShiLtJ_T0077893.1 MGP_NODShiLtJ_G0030721.1 mouse_genomes_project 6 94058011 94067153 + MGP_NODShiLtJ_P0077893 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0077894.1 MGP_NODShiLtJ_G0030721.1 mouse_genomes_project 6 94058177 94060069 + MGP_NODShiLtJ_P0077894 protein_coding non_stop_decay MGP_NODShiLtJ_T0076618.1 MGP_NODShiLtJ_G0030385.1 mouse_genomes_project 6 40460287 40498737 + MGP_NODShiLtJ_P0076618 Akr1d1 protein_coding protein_coding MGP_NODShiLtJ_T0076619.1 MGP_NODShiLtJ_G0030385.1 mouse_genomes_project 6 40469794 40486441 + Akr1d1 protein_coding processed_transcript MGP_NODShiLtJ_T0015548.1 MGP_NODShiLtJ_G0013656.1 mouse_genomes_project 6 168386398 168387262 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008472.1 MGP_NODShiLtJ_G0006848.1 mouse_genomes_project 6 33930452 34074783 + Gm43154 lincRNA lincRNA MGP_NODShiLtJ_T0008473.1 MGP_NODShiLtJ_G0006848.1 mouse_genomes_project 6 33930530 34075046 + Gm43154 lincRNA lincRNA MGP_NODShiLtJ_T0008476.1 MGP_NODShiLtJ_G0006848.1 mouse_genomes_project 6 33996365 34075048 + Gm43154 lincRNA lincRNA MGP_NODShiLtJ_T0076770.1 MGP_NODShiLtJ_G0030418.1 mouse_genomes_project 6 43754142 43755155 + MGP_NODShiLtJ_P0076770 Tas2r108 protein_coding protein_coding MGP_NODShiLtJ_T0015150.1 MGP_NODShiLtJ_G0013258.1 mouse_genomes_project 6 19057586 19059757 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002029.1 MGP_NODShiLtJ_G0001941.1 mouse_genomes_project 6 100281635 100285402 + TEC TEC MGP_NODShiLtJ_T0015410.1 MGP_NODShiLtJ_G0013518.1 mouse_genomes_project 6 123452073 123452326 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076809.1 MGP_NODShiLtJ_G0030438.1 mouse_genomes_project 6 45121208 45150388 - MGP_NODShiLtJ_P0076809 Trpv5 protein_coding protein_coding MGP_NODShiLtJ_T0076810.1 MGP_NODShiLtJ_G0030438.1 mouse_genomes_project 6 45122165 45150274 - MGP_NODShiLtJ_P0076810 Trpv5 protein_coding protein_coding MGP_NODShiLtJ_T0076583.1 MGP_NODShiLtJ_G0030376.1 mouse_genomes_project 6 37596237 37599843 - Cnot4 protein_coding retained_intron MGP_NODShiLtJ_T0076584.1 MGP_NODShiLtJ_G0030376.1 mouse_genomes_project 6 37596237 37722145 - MGP_NODShiLtJ_P0076584 Cnot4 protein_coding protein_coding MGP_NODShiLtJ_T0076585.1 MGP_NODShiLtJ_G0030376.1 mouse_genomes_project 6 37596238 37722214 - MGP_NODShiLtJ_P0076585 Cnot4 protein_coding protein_coding MGP_NODShiLtJ_T0076586.1 MGP_NODShiLtJ_G0030376.1 mouse_genomes_project 6 37596243 37722209 - MGP_NODShiLtJ_P0076586 Cnot4 protein_coding protein_coding MGP_NODShiLtJ_T0076587.1 MGP_NODShiLtJ_G0030376.1 mouse_genomes_project 6 37626817 37722235 - MGP_NODShiLtJ_P0076587 Cnot4 protein_coding protein_coding MGP_NODShiLtJ_T0076588.1 MGP_NODShiLtJ_G0030376.1 mouse_genomes_project 6 37627525 37672398 - MGP_NODShiLtJ_P0076588 Cnot4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0076589.1 MGP_NODShiLtJ_G0030376.1 mouse_genomes_project 6 37636933 37640874 - Cnot4 protein_coding retained_intron MGP_NODShiLtJ_T0076590.1 MGP_NODShiLtJ_G0030376.1 mouse_genomes_project 6 37637364 37722207 - Cnot4 protein_coding processed_transcript MGP_NODShiLtJ_T0001919.1 MGP_NODShiLtJ_G0001831.1 mouse_genomes_project 6 49309000 49311191 + TEC TEC MGP_NODShiLtJ_T0075875.1 MGP_NODShiLtJ_G0030243.1 mouse_genomes_project 6 2425379 2482088 + MGP_NODShiLtJ_P0075875 Asb4 protein_coding protein_coding MGP_NODShiLtJ_T0075876.1 MGP_NODShiLtJ_G0030243.1 mouse_genomes_project 6 2435629 2448573 + MGP_NODShiLtJ_P0075876 Asb4 protein_coding protein_coding MGP_NODShiLtJ_T0100656.1 MGP_NODShiLtJ_G0039050.1 mouse_genomes_project 6 26130555 26130687 - Gm24443 snoRNA snoRNA MGP_NODShiLtJ_T0000153.1 MGP_NODShiLtJ_G0000112.1 mouse_genomes_project 6 76011153 76011867 + MGP_NODShiLtJ_P0000153 Igkv1-132 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0015109.1 MGP_NODShiLtJ_G0013217.1 mouse_genomes_project 6 1157593 1157689 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015485.1 MGP_NODShiLtJ_G0013593.1 mouse_genomes_project 6 145153596 145154295 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001899.1 MGP_NODShiLtJ_G0001811.1 mouse_genomes_project 6 31693967 31695486 - TEC TEC MGP_NODShiLtJ_T0077799.1 MGP_NODShiLtJ_G0030700.1 mouse_genomes_project 6 88345428 88346968 + MGP_NODShiLtJ_P0077799 Gm8994 protein_coding protein_coding MGP_NODShiLtJ_T0077800.1 MGP_NODShiLtJ_G0030700.1 mouse_genomes_project 6 88345437 88346403 + MGP_NODShiLtJ_P0077800 Gm8994 protein_coding protein_coding MGP_NODShiLtJ_T0076932.1 MGP_NODShiLtJ_G0030485.1 mouse_genomes_project 6 49184916 52088435 + MGP_NODShiLtJ_P0076932 Cntnap2 protein_coding protein_coding MGP_NODShiLtJ_T0076933.1 MGP_NODShiLtJ_G0030485.1 mouse_genomes_project 6 50744906 51053490 + Cntnap2 protein_coding processed_transcript MGP_NODShiLtJ_T0076934.1 MGP_NODShiLtJ_G0030485.1 mouse_genomes_project 6 51735384 51794706 + MGP_NODShiLtJ_P0076934 Cntnap2 protein_coding protein_coding MGP_NODShiLtJ_T0076935.1 MGP_NODShiLtJ_G0030485.1 mouse_genomes_project 6 52017290 52088431 + MGP_NODShiLtJ_P0076935 Cntnap2 protein_coding protein_coding MGP_NODShiLtJ_T0076936.1 MGP_NODShiLtJ_G0030485.1 mouse_genomes_project 6 52017356 52083724 + MGP_NODShiLtJ_P0076936 Cntnap2 protein_coding protein_coding MGP_NODShiLtJ_T0076912.1 MGP_NODShiLtJ_G0030480.1 mouse_genomes_project 6 46881086 46886848 + MGP_NODShiLtJ_P0076912 Olfr434 protein_coding protein_coding MGP_NODShiLtJ_T0076913.1 MGP_NODShiLtJ_G0030480.1 mouse_genomes_project 6 46886349 46887405 + MGP_NODShiLtJ_P0076913 Olfr434 protein_coding protein_coding MGP_NODShiLtJ_T0002121.1 MGP_NODShiLtJ_G0002033.1 mouse_genomes_project 6 156510032 156510522 + TEC TEC MGP_NODShiLtJ_T0076238.1 MGP_NODShiLtJ_G0030321.1 mouse_genomes_project 6 31158708 31172381 + MGP_NODShiLtJ_P0076238 Lep protein_coding protein_coding MGP_NODShiLtJ_T0076239.1 MGP_NODShiLtJ_G0030321.1 mouse_genomes_project 6 31163983 31169493 + MGP_NODShiLtJ_P0076239 Lep protein_coding protein_coding MGP_NODShiLtJ_T0010644.1 MGP_NODShiLtJ_G0008777.1 mouse_genomes_project 6 25050559 25050641 + Gm26386 miRNA miRNA MGP_NODShiLtJ_T0101976.1 MGP_NODShiLtJ_G0040144.1 mouse_genomes_project 6 30518516 30520350 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0078663.1 MGP_NODShiLtJ_G0030875.1 mouse_genomes_project 6 107454873 107700567 - MGP_NODShiLtJ_P0078663 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078664.1 MGP_NODShiLtJ_G0030875.1 mouse_genomes_project 6 107547609 107626719 - protein_coding processed_transcript MGP_NODShiLtJ_T0078665.1 MGP_NODShiLtJ_G0030875.1 mouse_genomes_project 6 107575801 107640166 - MGP_NODShiLtJ_P0078665 protein_coding protein_coding MGP_NODShiLtJ_T0078666.1 MGP_NODShiLtJ_G0030875.1 mouse_genomes_project 6 107637456 107700592 - protein_coding retained_intron MGP_NODShiLtJ_T0008708.1 MGP_NODShiLtJ_G0007025.1 mouse_genomes_project 6 167046398 167047605 - Gm17216 lincRNA lincRNA MGP_NODShiLtJ_T0010650.1 MGP_NODShiLtJ_G0008783.1 mouse_genomes_project 6 32380165 32380240 - Mir182 miRNA miRNA MGP_NODShiLtJ_T0001937.1 MGP_NODShiLtJ_G0001849.1 mouse_genomes_project 6 51459643 51463393 + TEC TEC MGP_NODShiLtJ_T0000205.1 MGP_NODShiLtJ_G0000148.1 mouse_genomes_project 6 78736300 78736867 - MGP_NODShiLtJ_P0000205 Igkv8-34 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0099453.1 MGP_NODShiLtJ_G0037847.1 mouse_genomes_project 6 127516313 127516419 + Gm22591 snRNA snRNA MGP_NODShiLtJ_T0079134.1 MGP_NODShiLtJ_G0030962.1 mouse_genomes_project 6 130384492 130415348 + MGP_NODShiLtJ_P0079134 Cand2 protein_coding protein_coding MGP_NODShiLtJ_T0100701.1 MGP_NODShiLtJ_G0039095.1 mouse_genomes_project 6 130417769 130417909 - Snora7a snoRNA snoRNA MGP_NODShiLtJ_T0015537.1 MGP_NODShiLtJ_G0013645.1 mouse_genomes_project 6 165792381 165792840 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000168.1 MGP_NODShiLtJ_G0000122.1 mouse_genomes_project 6 76645377 76645858 + MGP_NODShiLtJ_P0000168 Igkv14-111 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0078634.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105481889 106130617 - MGP_NODShiLtJ_P0078634 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078635.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105481889 106130304 - MGP_NODShiLtJ_P0078635 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078636.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105481889 106130304 - MGP_NODShiLtJ_P0078636 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078637.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105484666 105738399 - MGP_NODShiLtJ_P0078637 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078638.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105484985 105769962 - MGP_NODShiLtJ_P0078638 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078639.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105488257 105738263 - MGP_NODShiLtJ_P0078639 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078640.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105488862 105737673 - MGP_NODShiLtJ_P0078640 Magi1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078641.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105489805 106130595 - MGP_NODShiLtJ_P0078641 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078642.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105586182 105737215 - MGP_NODShiLtJ_P0078642 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078643.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105597868 105605122 - MGP_NODShiLtJ_P0078643 Magi1 protein_coding protein_coding MGP_NODShiLtJ_T0078644.1 MGP_NODShiLtJ_G0030870.1 mouse_genomes_project 6 105974738 106129725 - Magi1 protein_coding processed_transcript MGP_NODShiLtJ_T0076506.1 MGP_NODShiLtJ_G0030364.1 mouse_genomes_project 6 36815329 36820223 - Akr1b3 protein_coding retained_intron MGP_NODShiLtJ_T0076507.1 MGP_NODShiLtJ_G0030364.1 mouse_genomes_project 6 36816822 36826171 - MGP_NODShiLtJ_P0076507 Akr1b3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0076508.1 MGP_NODShiLtJ_G0030364.1 mouse_genomes_project 6 36816829 36832705 - MGP_NODShiLtJ_P0076508 Akr1b3 protein_coding protein_coding MGP_NODShiLtJ_T0076509.1 MGP_NODShiLtJ_G0030364.1 mouse_genomes_project 6 36820388 36832668 - Akr1b3 protein_coding retained_intron MGP_NODShiLtJ_T0076510.1 MGP_NODShiLtJ_G0030364.1 mouse_genomes_project 6 36822558 36832657 - Akr1b3 protein_coding retained_intron MGP_NODShiLtJ_T0076511.1 MGP_NODShiLtJ_G0030364.1 mouse_genomes_project 6 36824764 36832686 - MGP_NODShiLtJ_P0076511 Akr1b3 protein_coding protein_coding MGP_NODShiLtJ_T0011554.1 MGP_NODShiLtJ_G0009687.1 mouse_genomes_project 6 122243106 122243460 + Gm27813 misc_RNA misc_RNA MGP_NODShiLtJ_T0010691.1 MGP_NODShiLtJ_G0008824.1 mouse_genomes_project 6 128206470 128206528 + Mir7042 miRNA miRNA MGP_NODShiLtJ_T0076544.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328465 37406058 + Agbl3 protein_coding retained_intron MGP_NODShiLtJ_T0076545.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328465 37418767 + MGP_NODShiLtJ_P0076545 Agbl3 protein_coding protein_coding MGP_NODShiLtJ_T0076546.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328465 37418767 + MGP_NODShiLtJ_P0076546 Agbl3 protein_coding protein_coding MGP_NODShiLtJ_T0076547.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328475 37359437 + MGP_NODShiLtJ_P0076547 Agbl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076548.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328485 37354071 + Agbl3 protein_coding retained_intron MGP_NODShiLtJ_T0076549.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328881 37420294 + MGP_NODShiLtJ_P0076549 Agbl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076550.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328908 37362235 + Agbl3 protein_coding retained_intron MGP_NODShiLtJ_T0076551.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328908 37340640 + MGP_NODShiLtJ_P0076551 Agbl3 protein_coding protein_coding MGP_NODShiLtJ_T0076552.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328909 37356639 + Agbl3 protein_coding retained_intron MGP_NODShiLtJ_T0076553.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328922 37340565 + MGP_NODShiLtJ_P0076553 Agbl3 protein_coding protein_coding MGP_NODShiLtJ_T0076554.1 MGP_NODShiLtJ_G0030370.1 mouse_genomes_project 6 37328923 37340604 + MGP_NODShiLtJ_P0076554 Agbl3 protein_coding protein_coding MGP_NODShiLtJ_T0076160.1 MGP_NODShiLtJ_G0030297.1 mouse_genomes_project 6 24486756 24488193 - MGP_NODShiLtJ_P0076160 Rnf133 protein_coding protein_coding MGP_NODShiLtJ_T0076161.1 MGP_NODShiLtJ_G0030297.1 mouse_genomes_project 6 24486761 24488094 - MGP_NODShiLtJ_P0076161 Rnf133 protein_coding protein_coding MGP_NODShiLtJ_T0008586.1 MGP_NODShiLtJ_G0006934.1 mouse_genomes_project 6 99647476 99649761 - Gm44246 lincRNA lincRNA MGP_NODShiLtJ_T0008443.1 MGP_NODShiLtJ_G0006829.1 mouse_genomes_project 6 16558105 16565980 + D830026I12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008444.1 MGP_NODShiLtJ_G0006829.1 mouse_genomes_project 6 16558461 16566886 + D830026I12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008445.1 MGP_NODShiLtJ_G0006829.1 mouse_genomes_project 6 16558476 16572286 + D830026I12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008448.1 MGP_NODShiLtJ_G0006832.1 mouse_genomes_project 6 22397578 22402770 - Gm3289 lincRNA lincRNA MGP_NODShiLtJ_T0004855.1 MGP_NODShiLtJ_G0004165.1 mouse_genomes_project 6 17747710 17771295 - Gm15592 antisense antisense MGP_NODShiLtJ_T0078238.1 MGP_NODShiLtJ_G0030787.1 mouse_genomes_project 6 98052416 98096097 - MGP_NODShiLtJ_P0078238 Gmcl1 protein_coding protein_coding MGP_NODShiLtJ_T0078239.1 MGP_NODShiLtJ_G0030787.1 mouse_genomes_project 6 98074866 98077626 - Gmcl1 protein_coding retained_intron MGP_NODShiLtJ_T0078240.1 MGP_NODShiLtJ_G0030787.1 mouse_genomes_project 6 98074950 98080405 - Gmcl1 protein_coding retained_intron MGP_NODShiLtJ_T0078241.1 MGP_NODShiLtJ_G0030787.1 mouse_genomes_project 6 98082009 98095954 - MGP_NODShiLtJ_P0078241 Gmcl1 protein_coding protein_coding MGP_NODShiLtJ_T0002008.1 MGP_NODShiLtJ_G0001920.1 mouse_genomes_project 6 98235052 98236464 + TEC TEC MGP_NODShiLtJ_T0076277.1 MGP_NODShiLtJ_G0030329.1 mouse_genomes_project 6 31513525 31517369 - MGP_NODShiLtJ_P0076277 Opn1sw protein_coding protein_coding MGP_NODShiLtJ_T0076278.1 MGP_NODShiLtJ_G0030329.1 mouse_genomes_project 6 31514238 31517287 - MGP_NODShiLtJ_P0076278 Opn1sw protein_coding protein_coding MGP_NODShiLtJ_T0076279.1 MGP_NODShiLtJ_G0030329.1 mouse_genomes_project 6 31515786 31517269 - Opn1sw protein_coding processed_transcript MGP_NODShiLtJ_T0076280.1 MGP_NODShiLtJ_G0030329.1 mouse_genomes_project 6 31516228 31525347 - MGP_NODShiLtJ_P0076280 Opn1sw protein_coding protein_coding MGP_NODShiLtJ_T0100726.1 MGP_NODShiLtJ_G0039120.1 mouse_genomes_project 6 167505225 167505362 - Gm23456 snoRNA snoRNA MGP_NODShiLtJ_T0015293.1 MGP_NODShiLtJ_G0013401.1 mouse_genomes_project 6 75378485 75381181 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076799.1 MGP_NODShiLtJ_G0030434.1 mouse_genomes_project 6 44760686 44867186 + MGP_NODShiLtJ_P0076799 protein_coding protein_coding MGP_NODShiLtJ_T0004853.1 MGP_NODShiLtJ_G0004163.1 mouse_genomes_project 6 16568015 16764630 - Gm15581 antisense antisense MGP_NODShiLtJ_T0005070.1 MGP_NODShiLtJ_G0004323.1 mouse_genomes_project 6 164144240 164147127 + Gm15499 antisense antisense MGP_NODShiLtJ_T0011553.1 MGP_NODShiLtJ_G0009686.1 mouse_genomes_project 6 112233851 112234173 - Gm24248 misc_RNA misc_RNA MGP_NODShiLtJ_T0000161.1 MGP_NODShiLtJ_G0000118.1 mouse_genomes_project 6 76219465 76219945 + MGP_NODShiLtJ_P0000161 Igkv11-125 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000162.1 MGP_NODShiLtJ_G0000118.1 mouse_genomes_project 6 76219465 76219945 + MGP_NODShiLtJ_P0000162 Igkv11-125 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0015223.1 MGP_NODShiLtJ_G0013331.1 mouse_genomes_project 6 54403659 54404483 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080450.1 MGP_NODShiLtJ_G0031263.1 mouse_genomes_project 6 159559671 159861292 + MGP_NODShiLtJ_P0080450 Pde3a protein_coding protein_coding MGP_NODShiLtJ_T0080451.1 MGP_NODShiLtJ_G0031263.1 mouse_genomes_project 6 159560368 159813013 + Pde3a protein_coding retained_intron MGP_NODShiLtJ_T0079228.1 MGP_NODShiLtJ_G0030978.1 mouse_genomes_project 6 131288892 131289986 - MGP_NODShiLtJ_P0079228 Olfr215 protein_coding protein_coding MGP_NODShiLtJ_T0002075.1 MGP_NODShiLtJ_G0001987.1 mouse_genomes_project 6 127774788 127775838 - TEC TEC MGP_NODShiLtJ_T0077801.1 MGP_NODShiLtJ_G0030701.1 mouse_genomes_project 6 88516921 88519163 + MGP_NODShiLtJ_P0077801 Reg3b protein_coding protein_coding MGP_NODShiLtJ_T0077802.1 MGP_NODShiLtJ_G0030701.1 mouse_genomes_project 6 88517125 88519731 + MGP_NODShiLtJ_P0077802 Reg3b protein_coding protein_coding MGP_NODShiLtJ_T0077803.1 MGP_NODShiLtJ_G0030701.1 mouse_genomes_project 6 88517162 88519173 + MGP_NODShiLtJ_P0077803 Reg3b protein_coding protein_coding MGP_NODShiLtJ_T0077804.1 MGP_NODShiLtJ_G0030701.1 mouse_genomes_project 6 88518795 88519683 + Reg3b protein_coding retained_intron MGP_NODShiLtJ_T0001875.1 MGP_NODShiLtJ_G0001787.1 mouse_genomes_project 6 2315388 2317214 + TEC TEC MGP_NODShiLtJ_T0008447.1 MGP_NODShiLtJ_G0006831.1 mouse_genomes_project 6 18983733 19017261 - 4930524B17Rik lincRNA lincRNA MGP_NODShiLtJ_T0008703.1 MGP_NODShiLtJ_G0007022.1 mouse_genomes_project 6 166021202 166022469 - Gm15767 lincRNA lincRNA MGP_NODShiLtJ_T0008704.1 MGP_NODShiLtJ_G0007022.1 mouse_genomes_project 6 166021398 166022461 - Gm15767 lincRNA lincRNA MGP_NODShiLtJ_T0015286.1 MGP_NODShiLtJ_G0013394.1 mouse_genomes_project 6 74564638 74566553 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080143.1 MGP_NODShiLtJ_G0031178.1 mouse_genomes_project 6 148008876 148045730 + MGP_NODShiLtJ_P0080143 Klra2 protein_coding protein_coding MGP_NODShiLtJ_T0080144.1 MGP_NODShiLtJ_G0031178.1 mouse_genomes_project 6 148008876 148040531 + MGP_NODShiLtJ_P0080144 Klra2 protein_coding protein_coding MGP_NODShiLtJ_T0001874.1 MGP_NODShiLtJ_G0001786.1 mouse_genomes_project 6 2243185 2247167 - TEC TEC MGP_NODShiLtJ_T0101181.1 MGP_NODShiLtJ_G0039497.1 mouse_genomes_project 6 112617241 112618273 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101182.1 MGP_NODShiLtJ_G0039497.1 mouse_genomes_project 6 112618144 112620358 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0008471.1 MGP_NODShiLtJ_G0006847.1 mouse_genomes_project 6 33899067 33900806 + Gm6117 lincRNA lincRNA MGP_NODShiLtJ_T0000214.1 MGP_NODShiLtJ_G0000155.1 mouse_genomes_project 6 79092926 79093493 - MGP_NODShiLtJ_P0000214 Igkv8-16 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000221.1 MGP_NODShiLtJ_G0000161.1 mouse_genomes_project 6 79423465 79425320 + MGP_NODShiLtJ_P0000221 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0078864.1 MGP_NODShiLtJ_G0030917.1 mouse_genomes_project 6 127145915 127389471 - MGP_NODShiLtJ_P0078864 Srgap3 protein_coding protein_coding MGP_NODShiLtJ_T0078865.1 MGP_NODShiLtJ_G0030917.1 mouse_genomes_project 6 127145918 127388959 - MGP_NODShiLtJ_P0078865 Srgap3 protein_coding protein_coding MGP_NODShiLtJ_T0078866.1 MGP_NODShiLtJ_G0030917.1 mouse_genomes_project 6 127168598 127197945 - MGP_NODShiLtJ_P0078866 Srgap3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078867.1 MGP_NODShiLtJ_G0030917.1 mouse_genomes_project 6 127197571 127389471 - Srgap3 protein_coding retained_intron MGP_NODShiLtJ_T0078868.1 MGP_NODShiLtJ_G0030917.1 mouse_genomes_project 6 127226672 127261540 - Srgap3 protein_coding retained_intron MGP_NODShiLtJ_T0011551.1 MGP_NODShiLtJ_G0009684.1 mouse_genomes_project 6 99873807 99874132 + Gm25178 misc_RNA misc_RNA MGP_NODShiLtJ_T0001985.1 MGP_NODShiLtJ_G0001897.1 mouse_genomes_project 6 88096934 88098987 + TEC TEC MGP_NODShiLtJ_T0015308.1 MGP_NODShiLtJ_G0013416.1 mouse_genomes_project 6 77381755 77382207 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077429.1 MGP_NODShiLtJ_G0030610.1 mouse_genomes_project 6 63553473 63554508 - MGP_NODShiLtJ_P0077429 Vmn1r21 protein_coding protein_coding MGP_NODShiLtJ_T0077430.1 MGP_NODShiLtJ_G0030610.1 mouse_genomes_project 6 63554144 63561350 - MGP_NODShiLtJ_P0077430 Vmn1r21 protein_coding protein_coding MGP_NODShiLtJ_T0077431.1 MGP_NODShiLtJ_G0030610.1 mouse_genomes_project 6 63554151 63561352 - MGP_NODShiLtJ_P0077431 Vmn1r21 protein_coding protein_coding MGP_NODShiLtJ_T0015396.1 MGP_NODShiLtJ_G0013504.1 mouse_genomes_project 6 116978296 116978676 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000301.1 MGP_NODShiLtJ_G0000239.1 mouse_genomes_project 6 77335661 77336055 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0008478.1 MGP_NODShiLtJ_G0006852.1 mouse_genomes_project 6 34121056 34258978 + Gm13849 lincRNA lincRNA MGP_NODShiLtJ_T0018079.1 MGP_NODShiLtJ_G0015490.1 mouse_genomes_project 6 15644350 15645772 - processed_transcript retained_intron MGP_NODShiLtJ_T0015198.1 MGP_NODShiLtJ_G0013306.1 mouse_genomes_project 6 47082384 47084132 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078517.1 MGP_NODShiLtJ_G0030847.1 mouse_genomes_project 6 102180301 102222001 + MGP_NODShiLtJ_P0078517 Slc41a3 protein_coding protein_coding MGP_NODShiLtJ_T0078518.1 MGP_NODShiLtJ_G0030847.1 mouse_genomes_project 6 102194723 102222001 + MGP_NODShiLtJ_P0078518 Slc41a3 protein_coding protein_coding MGP_NODShiLtJ_T0000209.1 MGP_NODShiLtJ_G0000151.1 mouse_genomes_project 6 78914811 78915334 - MGP_NODShiLtJ_P0000209 Igkv8-24 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0099454.1 MGP_NODShiLtJ_G0037848.1 mouse_genomes_project 6 133703075 133703176 + Gm25905 snRNA snRNA MGP_NODShiLtJ_T0010705.1 MGP_NODShiLtJ_G0008838.1 mouse_genomes_project 6 141002644 141002731 + Mir3098 miRNA miRNA MGP_NODShiLtJ_T0076801.1 MGP_NODShiLtJ_G0030436.1 mouse_genomes_project 6 45071544 45086569 + MGP_NODShiLtJ_P0076801 Ephb6 protein_coding protein_coding MGP_NODShiLtJ_T0076802.1 MGP_NODShiLtJ_G0030436.1 mouse_genomes_project 6 45079358 45080672 + Ephb6 protein_coding processed_transcript MGP_NODShiLtJ_T0076803.1 MGP_NODShiLtJ_G0030436.1 mouse_genomes_project 6 45080752 45082817 + MGP_NODShiLtJ_P0076803 Ephb6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076804.1 MGP_NODShiLtJ_G0030436.1 mouse_genomes_project 6 45086002 45086567 + MGP_NODShiLtJ_P0076804 Ephb6 protein_coding protein_coding MGP_NODShiLtJ_T0001891.1 MGP_NODShiLtJ_G0001803.1 mouse_genomes_project 6 24032993 24035211 + TEC TEC MGP_NODShiLtJ_T0015487.1 MGP_NODShiLtJ_G0013595.1 mouse_genomes_project 6 145952540 145952982 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102037.1 MGP_NODShiLtJ_G0040204.1 mouse_genomes_project 6 147810458 147812124 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0078352.1 MGP_NODShiLtJ_G0030810.1 mouse_genomes_project 6 99445214 99498349 - MGP_NODShiLtJ_P0078352 Rab7 protein_coding protein_coding MGP_NODShiLtJ_T0078353.1 MGP_NODShiLtJ_G0030810.1 mouse_genomes_project 6 99450275 99498340 - MGP_NODShiLtJ_P0078353 Rab7 protein_coding protein_coding MGP_NODShiLtJ_T0078354.1 MGP_NODShiLtJ_G0030810.1 mouse_genomes_project 6 99450333 99498307 - MGP_NODShiLtJ_P0078354 Rab7 protein_coding protein_coding MGP_NODShiLtJ_T0015233.1 MGP_NODShiLtJ_G0013341.1 mouse_genomes_project 6 57567228 57567416 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000152.1 MGP_NODShiLtJ_G0000111.1 mouse_genomes_project 6 75974542 75975302 + MGP_NODShiLtJ_P0000152 Igkv1-133 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0010709.1 MGP_NODShiLtJ_G0008842.1 mouse_genomes_project 6 144816698 144816746 + Mir7649 miRNA miRNA MGP_NODShiLtJ_T0002047.1 MGP_NODShiLtJ_G0001959.1 mouse_genomes_project 6 105005553 105008000 + TEC TEC MGP_NODShiLtJ_T0008558.1 MGP_NODShiLtJ_G0006912.1 mouse_genomes_project 6 82431943 82454247 - lincRNA lincRNA MGP_NODShiLtJ_T0078812.1 MGP_NODShiLtJ_G0030904.1 mouse_genomes_project 6 121234322 121277320 + MGP_NODShiLtJ_P0078812 Lrrn1 protein_coding protein_coding MGP_NODShiLtJ_T0080768.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168080224 168084481 + MGP_NODShiLtJ_P0080768 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0080769.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168081888 168092383 + MGP_NODShiLtJ_P0080769 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0080770.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168081888 168092378 + MGP_NODShiLtJ_P0080770 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0080771.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168081891 168085327 + MGP_NODShiLtJ_P0080771 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0080772.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168081929 168085327 + MGP_NODShiLtJ_P0080772 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0080773.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168081939 168091610 + MGP_NODShiLtJ_P0080773 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0080774.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168081949 168092383 + MGP_NODShiLtJ_P0080774 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0080775.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168082013 168091625 + MGP_NODShiLtJ_P0080775 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0080776.1 MGP_NODShiLtJ_G0031320.1 mouse_genomes_project 6 168082021 168092383 + MGP_NODShiLtJ_P0080776 Mettl20 protein_coding protein_coding MGP_NODShiLtJ_T0008561.1 MGP_NODShiLtJ_G0006915.1 mouse_genomes_project 6 89164581 89164901 - Gm29005 lincRNA lincRNA MGP_NODShiLtJ_T0004875.1 MGP_NODShiLtJ_G0004182.1 mouse_genomes_project 6 39810015 39861536 + 1700111E14Rik antisense antisense MGP_NODShiLtJ_T0004903.1 MGP_NODShiLtJ_G0004202.1 mouse_genomes_project 6 57524311 57530790 - Evx1os antisense antisense MGP_NODShiLtJ_T0004904.1 MGP_NODShiLtJ_G0004202.1 mouse_genomes_project 6 57526758 57529463 - Evx1os antisense antisense MGP_NODShiLtJ_T0076771.1 MGP_NODShiLtJ_G0030419.1 mouse_genomes_project 6 43775085 43779770 - MGP_NODShiLtJ_P0076771 Prss37 protein_coding protein_coding MGP_NODShiLtJ_T0076772.1 MGP_NODShiLtJ_G0030419.1 mouse_genomes_project 6 43779430 43779745 - Prss37 protein_coding processed_transcript MGP_NODShiLtJ_T0000315.1 MGP_NODShiLtJ_G0000253.1 mouse_genomes_project 6 78498892 78499361 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0080692.1 MGP_NODShiLtJ_G0031307.1 mouse_genomes_project 6 165796981 165798670 + MGP_NODShiLtJ_P0080692 Rep15 protein_coding protein_coding MGP_NODShiLtJ_T0015255.1 MGP_NODShiLtJ_G0013363.1 mouse_genomes_project 6 67654072 67654958 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077470.1 MGP_NODShiLtJ_G0030625.1 mouse_genomes_project 6 65009043 65102356 - MGP_NODShiLtJ_P0077470 Fam13a protein_coding protein_coding MGP_NODShiLtJ_T0077471.1 MGP_NODShiLtJ_G0030625.1 mouse_genomes_project 6 65012538 65102147 - MGP_NODShiLtJ_P0077471 Fam13a protein_coding protein_coding MGP_NODShiLtJ_T0077472.1 MGP_NODShiLtJ_G0030625.1 mouse_genomes_project 6 65050500 65102229 - Fam13a protein_coding processed_transcript MGP_NODShiLtJ_T0077473.1 MGP_NODShiLtJ_G0030625.1 mouse_genomes_project 6 65082979 65102311 - Fam13a protein_coding retained_intron MGP_NODShiLtJ_T0077474.1 MGP_NODShiLtJ_G0030625.1 mouse_genomes_project 6 65097941 65102250 - Fam13a protein_coding retained_intron MGP_NODShiLtJ_T0076192.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 26940973 27012403 - MGP_NODShiLtJ_P0076192 Pot1a protein_coding protein_coding MGP_NODShiLtJ_T0076193.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 26941737 26943431 - Pot1a protein_coding retained_intron MGP_NODShiLtJ_T0076194.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 26941817 27000510 - MGP_NODShiLtJ_P0076194 Pot1a protein_coding protein_coding MGP_NODShiLtJ_T0076195.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 26946107 27012403 - Pot1a protein_coding retained_intron MGP_NODShiLtJ_T0076196.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 26955024 27012372 - MGP_NODShiLtJ_P0076196 Pot1a protein_coding protein_coding MGP_NODShiLtJ_T0076197.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 26973138 27012399 - Pot1a protein_coding processed_transcript MGP_NODShiLtJ_T0076198.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 26995019 27012423 - Pot1a protein_coding retained_intron MGP_NODShiLtJ_T0076199.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 27001028 27012393 - Pot1a protein_coding retained_intron MGP_NODShiLtJ_T0076200.1 MGP_NODShiLtJ_G0030312.1 mouse_genomes_project 6 27002812 27003885 - Pot1a protein_coding processed_transcript MGP_NODShiLtJ_T0077013.1 MGP_NODShiLtJ_G0030499.1 mouse_genomes_project 6 53433058 53438512 + MGP_NODShiLtJ_P0077013 Atp6v0e2 protein_coding protein_coding MGP_NODShiLtJ_T0077014.1 MGP_NODShiLtJ_G0030499.1 mouse_genomes_project 6 53433081 53436577 + Atp6v0e2 protein_coding retained_intron MGP_NODShiLtJ_T0077015.1 MGP_NODShiLtJ_G0030499.1 mouse_genomes_project 6 53433108 53438512 + MGP_NODShiLtJ_P0077015 Atp6v0e2 protein_coding protein_coding MGP_NODShiLtJ_T0004867.1 MGP_NODShiLtJ_G0004175.1 mouse_genomes_project 6 34810077 34813658 + Plxna4os2 antisense antisense MGP_NODShiLtJ_T0098439.1 MGP_NODShiLtJ_G0036840.1 mouse_genomes_project 6 145804589 145805182 + Gm43914 sense_intronic sense_intronic MGP_NODShiLtJ_T0098437.1 MGP_NODShiLtJ_G0036838.1 mouse_genomes_project 6 140993212 140993493 - Gm28967 sense_intronic sense_intronic MGP_NODShiLtJ_T0080184.1 MGP_NODShiLtJ_G0031210.1 mouse_genomes_project 6 150327190 150332203 + MGP_NODShiLtJ_P0080184 Smim10l1 protein_coding protein_coding MGP_NODShiLtJ_T0080185.1 MGP_NODShiLtJ_G0031210.1 mouse_genomes_project 6 150327535 150335367 + MGP_NODShiLtJ_P0080185 Smim10l1 protein_coding protein_coding MGP_NODShiLtJ_T0080186.1 MGP_NODShiLtJ_G0031210.1 mouse_genomes_project 6 150327569 150335369 + MGP_NODShiLtJ_P0080186 Smim10l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076620.1 MGP_NODShiLtJ_G0030386.1 mouse_genomes_project 6 40860374 40942181 + Trim24 protein_coding retained_intron MGP_NODShiLtJ_T0076621.1 MGP_NODShiLtJ_G0030386.1 mouse_genomes_project 6 40860374 40916116 + Trim24 protein_coding retained_intron MGP_NODShiLtJ_T0076622.1 MGP_NODShiLtJ_G0030386.1 mouse_genomes_project 6 40860374 40965917 + MGP_NODShiLtJ_P0076622 Trim24 protein_coding protein_coding MGP_NODShiLtJ_T0076623.1 MGP_NODShiLtJ_G0030386.1 mouse_genomes_project 6 40860374 40965917 + MGP_NODShiLtJ_P0076623 Trim24 protein_coding protein_coding MGP_NODShiLtJ_T0076624.1 MGP_NODShiLtJ_G0030386.1 mouse_genomes_project 6 40865893 40926004 + Trim24 protein_coding processed_transcript MGP_NODShiLtJ_T0076625.1 MGP_NODShiLtJ_G0030386.1 mouse_genomes_project 6 40891958 40965553 + MGP_NODShiLtJ_P0076625 Trim24 protein_coding protein_coding MGP_NODShiLtJ_T0076626.1 MGP_NODShiLtJ_G0030386.1 mouse_genomes_project 6 40907587 40922534 + Trim24 protein_coding retained_intron MGP_NODShiLtJ_T0076627.1 MGP_NODShiLtJ_G0030386.1 mouse_genomes_project 6 40943940 40953316 + Trim24 protein_coding retained_intron MGP_NODShiLtJ_T0008638.1 MGP_NODShiLtJ_G0006973.1 mouse_genomes_project 6 132361480 132391435 - Gm45083 lincRNA lincRNA MGP_NODShiLtJ_T0078497.1 MGP_NODShiLtJ_G0030844.1 mouse_genomes_project 6 101977412 102003128 - MGP_NODShiLtJ_P0078497 Cfap100 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078498.1 MGP_NODShiLtJ_G0030844.1 mouse_genomes_project 6 101977669 102002773 - MGP_NODShiLtJ_P0078498 Cfap100 protein_coding protein_coding MGP_NODShiLtJ_T0078499.1 MGP_NODShiLtJ_G0030844.1 mouse_genomes_project 6 101977670 102001830 - MGP_NODShiLtJ_P0078499 Cfap100 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078500.1 MGP_NODShiLtJ_G0030844.1 mouse_genomes_project 6 101977671 102002754 - MGP_NODShiLtJ_P0078500 Cfap100 protein_coding protein_coding MGP_NODShiLtJ_T0078501.1 MGP_NODShiLtJ_G0030844.1 mouse_genomes_project 6 101994844 102003138 - MGP_NODShiLtJ_P0078501 Cfap100 protein_coding protein_coding MGP_NODShiLtJ_T0078502.1 MGP_NODShiLtJ_G0030844.1 mouse_genomes_project 6 101995057 102002776 - MGP_NODShiLtJ_P0078502 Cfap100 protein_coding protein_coding MGP_NODShiLtJ_T0078503.1 MGP_NODShiLtJ_G0030844.1 mouse_genomes_project 6 102000824 102002736 - MGP_NODShiLtJ_P0078503 Cfap100 protein_coding protein_coding MGP_NODShiLtJ_T0078504.1 MGP_NODShiLtJ_G0030844.1 mouse_genomes_project 6 102002236 102002926 - Cfap100 protein_coding processed_transcript MGP_NODShiLtJ_T0075986.1 MGP_NODShiLtJ_G0030268.1 mouse_genomes_project 6 12161142 12237161 - MGP_NODShiLtJ_P0075986 Bmt2 protein_coding protein_coding MGP_NODShiLtJ_T0075987.1 MGP_NODShiLtJ_G0030268.1 mouse_genomes_project 6 12163445 12237133 - MGP_NODShiLtJ_P0075987 Bmt2 protein_coding protein_coding MGP_NODShiLtJ_T0101985.1 MGP_NODShiLtJ_G0040153.1 mouse_genomes_project 6 44961389 44962920 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008563.1 MGP_NODShiLtJ_G0006917.1 mouse_genomes_project 6 92815108 92826778 - 1700009C05Rik lincRNA lincRNA MGP_NODShiLtJ_T0077092.1 MGP_NODShiLtJ_G0030519.1 mouse_genomes_project 6 53794877 53829794 + MGP_NODShiLtJ_P0077092 Aoc1 protein_coding protein_coding MGP_NODShiLtJ_T0077093.1 MGP_NODShiLtJ_G0030519.1 mouse_genomes_project 6 53819038 53833106 + MGP_NODShiLtJ_P0077093 Aoc1 protein_coding protein_coding MGP_NODShiLtJ_T0077094.1 MGP_NODShiLtJ_G0030519.1 mouse_genomes_project 6 53828903 53833105 + MGP_NODShiLtJ_P0077094 Aoc1 protein_coding protein_coding MGP_NODShiLtJ_T0077095.1 MGP_NODShiLtJ_G0030519.1 mouse_genomes_project 6 53828903 53833105 + MGP_NODShiLtJ_P0077095 Aoc1 protein_coding protein_coding MGP_NODShiLtJ_T0077096.1 MGP_NODShiLtJ_G0030519.1 mouse_genomes_project 6 53831272 53832569 + Aoc1 protein_coding retained_intron MGP_NODShiLtJ_T0015358.1 MGP_NODShiLtJ_G0013466.1 mouse_genomes_project 6 101424180 101425140 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079293.1 MGP_NODShiLtJ_G0030992.1 mouse_genomes_project 6 133325708 133343937 - MGP_NODShiLtJ_P0079293 Zfp9 protein_coding protein_coding MGP_NODShiLtJ_T0079294.1 MGP_NODShiLtJ_G0030992.1 mouse_genomes_project 6 133331255 133332850 - Zfp9 protein_coding retained_intron MGP_NODShiLtJ_T0015110.1 MGP_NODShiLtJ_G0013218.1 mouse_genomes_project 6 1280595 1281202 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079577.1 MGP_NODShiLtJ_G0031043.1 mouse_genomes_project 6 138443939 138500087 + MGP_NODShiLtJ_P0079577 Clec4a4 protein_coding protein_coding MGP_NODShiLtJ_T0000192.1 MGP_NODShiLtJ_G0000139.1 mouse_genomes_project 6 78334064 78334630 - MGP_NODShiLtJ_P0000192 Igkv5-48 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0004988.1 MGP_NODShiLtJ_G0004256.1 mouse_genomes_project 6 112044421 112051200 + Gm26748 antisense antisense MGP_NODShiLtJ_T0015271.1 MGP_NODShiLtJ_G0013379.1 mouse_genomes_project 6 73120714 73122115 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077403.1 MGP_NODShiLtJ_G0030599.1 mouse_genomes_project 6 62925262 62926162 + MGP_NODShiLtJ_P0077403 Vmn1r15 protein_coding protein_coding MGP_NODShiLtJ_T0076729.1 MGP_NODShiLtJ_G0030407.1 mouse_genomes_project 6 42759736 42777495 + MGP_NODShiLtJ_P0076729 Adck2 protein_coding protein_coding MGP_NODShiLtJ_T0076730.1 MGP_NODShiLtJ_G0030407.1 mouse_genomes_project 6 42759822 42772797 + MGP_NODShiLtJ_P0076730 Adck2 protein_coding protein_coding MGP_NODShiLtJ_T0076731.1 MGP_NODShiLtJ_G0030407.1 mouse_genomes_project 6 42759827 42776478 + MGP_NODShiLtJ_P0076731 Adck2 protein_coding protein_coding MGP_NODShiLtJ_T0076732.1 MGP_NODShiLtJ_G0030407.1 mouse_genomes_project 6 42760847 42766557 + Adck2 protein_coding retained_intron MGP_NODShiLtJ_T0076733.1 MGP_NODShiLtJ_G0030407.1 mouse_genomes_project 6 42762979 42769444 + MGP_NODShiLtJ_P0076733 Adck2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076734.1 MGP_NODShiLtJ_G0030407.1 mouse_genomes_project 6 42772679 42774664 + Adck2 protein_coding retained_intron MGP_NODShiLtJ_T0002071.1 MGP_NODShiLtJ_G0001983.1 mouse_genomes_project 6 122390335 122391513 - TEC TEC MGP_NODShiLtJ_T0077556.1 MGP_NODShiLtJ_G0030651.1 mouse_genomes_project 6 75139495 75141803 - MGP_NODShiLtJ_P0077556 Gadd45a protein_coding protein_coding MGP_NODShiLtJ_T0077557.1 MGP_NODShiLtJ_G0030651.1 mouse_genomes_project 6 75139856 75141598 - Gadd45a protein_coding retained_intron MGP_NODShiLtJ_T0077558.1 MGP_NODShiLtJ_G0030651.1 mouse_genomes_project 6 75139856 75141761 - MGP_NODShiLtJ_P0077558 Gadd45a protein_coding protein_coding MGP_NODShiLtJ_T0077559.1 MGP_NODShiLtJ_G0030651.1 mouse_genomes_project 6 75139863 75141648 - MGP_NODShiLtJ_P0077559 Gadd45a protein_coding protein_coding MGP_NODShiLtJ_T0077560.1 MGP_NODShiLtJ_G0030651.1 mouse_genomes_project 6 75139976 75141583 - Gadd45a protein_coding retained_intron MGP_NODShiLtJ_T0077561.1 MGP_NODShiLtJ_G0030651.1 mouse_genomes_project 6 75140768 75141774 - Gadd45a protein_coding retained_intron MGP_NODShiLtJ_T0077562.1 MGP_NODShiLtJ_G0030651.1 mouse_genomes_project 6 75141294 75141854 - Gadd45a protein_coding retained_intron MGP_NODShiLtJ_T0015179.1 MGP_NODShiLtJ_G0013287.1 mouse_genomes_project 6 40632375 40633332 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015315.1 MGP_NODShiLtJ_G0013423.1 mouse_genomes_project 6 81959099 81959685 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002021.1 MGP_NODShiLtJ_G0001933.1 mouse_genomes_project 6 99432299 99435838 + TEC TEC MGP_NODShiLtJ_T0011523.1 MGP_NODShiLtJ_G0009656.1 mouse_genomes_project 6 19080485 19080743 - Gm24213 misc_RNA misc_RNA MGP_NODShiLtJ_T0080146.1 MGP_NODShiLtJ_G0031179.1 mouse_genomes_project 6 148087576 148115910 - MGP_NODShiLtJ_P0080146 Ybx3 protein_coding protein_coding MGP_NODShiLtJ_T0080147.1 MGP_NODShiLtJ_G0031179.1 mouse_genomes_project 6 148087576 148115872 - MGP_NODShiLtJ_P0080147 Ybx3 protein_coding protein_coding MGP_NODShiLtJ_T0080148.1 MGP_NODShiLtJ_G0031179.1 mouse_genomes_project 6 148087811 148105681 - Ybx3 protein_coding processed_transcript MGP_NODShiLtJ_T0080149.1 MGP_NODShiLtJ_G0031179.1 mouse_genomes_project 6 148087821 148091675 - Ybx3 protein_coding retained_intron MGP_NODShiLtJ_T0080150.1 MGP_NODShiLtJ_G0031179.1 mouse_genomes_project 6 148103460 148105942 - Ybx3 protein_coding processed_transcript MGP_NODShiLtJ_T0015230.1 MGP_NODShiLtJ_G0013338.1 mouse_genomes_project 6 57318187 57318837 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002050.1 MGP_NODShiLtJ_G0001962.1 mouse_genomes_project 6 109270444 109273971 + TEC TEC MGP_NODShiLtJ_T0077688.1 MGP_NODShiLtJ_G0030679.1 mouse_genomes_project 6 81246485 81250401 + 0610030E20Rik protein_coding retained_intron MGP_NODShiLtJ_T0077689.1 MGP_NODShiLtJ_G0030679.1 mouse_genomes_project 6 81246494 81248348 + 0610030E20Rik protein_coding retained_intron MGP_NODShiLtJ_T0077690.1 MGP_NODShiLtJ_G0030679.1 mouse_genomes_project 6 81246502 81251010 + MGP_NODShiLtJ_P0077690 0610030E20Rik protein_coding protein_coding MGP_NODShiLtJ_T0077691.1 MGP_NODShiLtJ_G0030679.1 mouse_genomes_project 6 81246535 81249803 + 0610030E20Rik protein_coding retained_intron MGP_NODShiLtJ_T0002690.1 MGP_NODShiLtJ_G0002563.1 mouse_genomes_project 6 44575278 44575569 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0002516.1 MGP_NODShiLtJ_G0002418.1 mouse_genomes_project 6 44995071 44995124 + MGP_NODShiLtJ_P0002516 Trbj1-6 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0098062.1 MGP_NODShiLtJ_G0036474.1 mouse_genomes_project 6 32617335 32617449 + n-R5s161 rRNA rRNA MGP_NODShiLtJ_T0102009.1 MGP_NODShiLtJ_G0040177.1 mouse_genomes_project 6 67681761 67682026 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002061.1 MGP_NODShiLtJ_G0001973.1 mouse_genomes_project 6 113817901 113820754 - TEC TEC MGP_NODShiLtJ_T0001884.1 MGP_NODShiLtJ_G0001796.1 mouse_genomes_project 6 17132347 17135268 + TEC TEC MGP_NODShiLtJ_T0008610.1 MGP_NODShiLtJ_G0006950.1 mouse_genomes_project 6 112225025 112237471 - Gm43067 lincRNA lincRNA MGP_NODShiLtJ_T0101998.1 MGP_NODShiLtJ_G0040166.1 mouse_genomes_project 6 63774798 63774932 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0079535.1 MGP_NODShiLtJ_G0031031.1 mouse_genomes_project 6 137888446 137897961 + MGP_NODShiLtJ_P0079535 Mfap5 protein_coding protein_coding MGP_NODShiLtJ_T0079536.1 MGP_NODShiLtJ_G0031031.1 mouse_genomes_project 6 137896168 137912816 + MGP_NODShiLtJ_P0079536 Mfap5 protein_coding protein_coding MGP_NODShiLtJ_T0079537.1 MGP_NODShiLtJ_G0031031.1 mouse_genomes_project 6 137896168 137912292 + MGP_NODShiLtJ_P0079537 Mfap5 protein_coding protein_coding MGP_NODShiLtJ_T0079538.1 MGP_NODShiLtJ_G0031031.1 mouse_genomes_project 6 137896244 137912158 + MGP_NODShiLtJ_P0079538 Mfap5 protein_coding protein_coding MGP_NODShiLtJ_T0079539.1 MGP_NODShiLtJ_G0031031.1 mouse_genomes_project 6 137896261 137912158 + MGP_NODShiLtJ_P0079539 Mfap5 protein_coding protein_coding MGP_NODShiLtJ_T0079540.1 MGP_NODShiLtJ_G0031031.1 mouse_genomes_project 6 137896261 137911864 + MGP_NODShiLtJ_P0079540 Mfap5 protein_coding protein_coding MGP_NODShiLtJ_T0079541.1 MGP_NODShiLtJ_G0031031.1 mouse_genomes_project 6 137906033 137912161 + Mfap5 protein_coding retained_intron MGP_NODShiLtJ_T0015162.1 MGP_NODShiLtJ_G0013270.1 mouse_genomes_project 6 25852715 25853545 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001978.1 MGP_NODShiLtJ_G0001890.1 mouse_genomes_project 6 87465253 87469372 - TEC TEC MGP_NODShiLtJ_T0008545.1 MGP_NODShiLtJ_G0006900.1 mouse_genomes_project 6 67797050 67797738 - Gm43894 lincRNA lincRNA MGP_NODShiLtJ_T0015519.1 MGP_NODShiLtJ_G0013627.1 mouse_genomes_project 6 156837591 156838191 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002091.1 MGP_NODShiLtJ_G0002003.1 mouse_genomes_project 6 138246268 138248636 + TEC TEC MGP_NODShiLtJ_T0100681.1 MGP_NODShiLtJ_G0039075.1 mouse_genomes_project 6 76473889 76474009 - snoRNA snoRNA MGP_NODShiLtJ_T0008573.1 MGP_NODShiLtJ_G0006922.1 mouse_genomes_project 6 95352693 95420451 + Gm44127 lincRNA lincRNA MGP_NODShiLtJ_T0000047.1 MGP_NODShiLtJ_G0000038.1 mouse_genomes_project 6 79450756 79450794 + MGP_NODShiLtJ_P0000047 Igkj4 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0002694.1 MGP_NODShiLtJ_G0002567.1 mouse_genomes_project 6 44639707 44639971 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0002098.1 MGP_NODShiLtJ_G0002010.1 mouse_genomes_project 6 143528993 143531315 + TEC TEC MGP_NODShiLtJ_T0075880.1 MGP_NODShiLtJ_G0030245.1 mouse_genomes_project 6 2807883 3138287 + MGP_NODShiLtJ_P0075880 Dync1i1 protein_coding protein_coding MGP_NODShiLtJ_T0075881.1 MGP_NODShiLtJ_G0030245.1 mouse_genomes_project 6 2808007 3138278 + MGP_NODShiLtJ_P0075881 Dync1i1 protein_coding protein_coding MGP_NODShiLtJ_T0075882.1 MGP_NODShiLtJ_G0030245.1 mouse_genomes_project 6 2808035 3138287 + MGP_NODShiLtJ_P0075882 Dync1i1 protein_coding protein_coding MGP_NODShiLtJ_T0075883.1 MGP_NODShiLtJ_G0030245.1 mouse_genomes_project 6 2808056 3138287 + MGP_NODShiLtJ_P0075883 Dync1i1 protein_coding protein_coding MGP_NODShiLtJ_T0075884.1 MGP_NODShiLtJ_G0030245.1 mouse_genomes_project 6 2808062 2850443 + MGP_NODShiLtJ_P0075884 Dync1i1 protein_coding protein_coding MGP_NODShiLtJ_T0075885.1 MGP_NODShiLtJ_G0030245.1 mouse_genomes_project 6 2839828 2870629 + MGP_NODShiLtJ_P0075885 Dync1i1 protein_coding protein_coding MGP_NODShiLtJ_T0075886.1 MGP_NODShiLtJ_G0030245.1 mouse_genomes_project 6 3113918 3138035 + Dync1i1 protein_coding retained_intron MGP_NODShiLtJ_T0102051.1 MGP_NODShiLtJ_G0040218.1 mouse_genomes_project 6 150947633 150949654 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002100.1 MGP_NODShiLtJ_G0002012.1 mouse_genomes_project 6 143822673 143824925 - TEC TEC MGP_NODShiLtJ_T0077232.1 MGP_NODShiLtJ_G0030555.1 mouse_genomes_project 6 57529455 57534336 + MGP_NODShiLtJ_P0077232 Evx1 protein_coding protein_coding MGP_NODShiLtJ_T0077233.1 MGP_NODShiLtJ_G0030555.1 mouse_genomes_project 6 57529509 57532602 + MGP_NODShiLtJ_P0077233 Evx1 protein_coding protein_coding MGP_NODShiLtJ_T0000317.1 MGP_NODShiLtJ_G0000255.1 mouse_genomes_project 6 78732525 78732835 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0015207.1 MGP_NODShiLtJ_G0013315.1 mouse_genomes_project 6 52608480 52608859 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008714.1 MGP_NODShiLtJ_G0007030.1 mouse_genomes_project 6 167922422 167926265 + lincRNA lincRNA MGP_NODShiLtJ_T0077677.1 MGP_NODShiLtJ_G0030676.1 mouse_genomes_project 6 81090024 81122033 - MGP_NODShiLtJ_P0077677 Atoh8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077678.1 MGP_NODShiLtJ_G0030676.1 mouse_genomes_project 6 81090024 81123073 - MGP_NODShiLtJ_P0077678 Atoh8 protein_coding protein_coding MGP_NODShiLtJ_T0077679.1 MGP_NODShiLtJ_G0030676.1 mouse_genomes_project 6 81109615 81122726 - Atoh8 protein_coding processed_transcript MGP_NODShiLtJ_T0102046.1 MGP_NODShiLtJ_G0040213.1 mouse_genomes_project 6 150102806 150103733 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000313.1 MGP_NODShiLtJ_G0000251.1 mouse_genomes_project 6 78457058 78457508 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0005021.1 MGP_NODShiLtJ_G0004281.1 mouse_genomes_project 6 140203040 140205238 - Gm44096 antisense antisense MGP_NODShiLtJ_T0078778.1 MGP_NODShiLtJ_G0030899.1 mouse_genomes_project 6 117642277 117827871 + MGP_NODShiLtJ_P0078778 Cntn6 protein_coding protein_coding MGP_NODShiLtJ_T0078779.1 MGP_NODShiLtJ_G0030899.1 mouse_genomes_project 6 117642298 118123758 + MGP_NODShiLtJ_P0078779 Cntn6 protein_coding protein_coding MGP_NODShiLtJ_T0078780.1 MGP_NODShiLtJ_G0030899.1 mouse_genomes_project 6 117642409 118123916 + MGP_NODShiLtJ_P0078780 Cntn6 protein_coding protein_coding MGP_NODShiLtJ_T0078781.1 MGP_NODShiLtJ_G0030899.1 mouse_genomes_project 6 117642541 117748825 + Cntn6 protein_coding retained_intron MGP_NODShiLtJ_T0078782.1 MGP_NODShiLtJ_G0030899.1 mouse_genomes_project 6 117642735 118123911 + MGP_NODShiLtJ_P0078782 Cntn6 protein_coding protein_coding MGP_NODShiLtJ_T0015497.1 MGP_NODShiLtJ_G0013605.1 mouse_genomes_project 6 148684598 148684808 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101992.1 MGP_NODShiLtJ_G0040160.1 mouse_genomes_project 6 46787937 46788244 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011545.1 MGP_NODShiLtJ_G0009678.1 mouse_genomes_project 6 63249483 63249800 + Gm27896 misc_RNA misc_RNA MGP_NODShiLtJ_T0002523.1 MGP_NODShiLtJ_G0002424.1 mouse_genomes_project 6 45004846 45004895 + MGP_NODShiLtJ_P0002523 Trbj2-5 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0015294.1 MGP_NODShiLtJ_G0013402.1 mouse_genomes_project 6 75547797 75549534 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100669.1 MGP_NODShiLtJ_G0039063.1 mouse_genomes_project 6 59187339 59187471 - Gm22910 snoRNA snoRNA MGP_NODShiLtJ_T0077209.1 MGP_NODShiLtJ_G0030548.1 mouse_genomes_project 6 57408041 57410870 - MGP_NODShiLtJ_P0077209 Hoxa5 protein_coding protein_coding MGP_NODShiLtJ_T0077337.1 MGP_NODShiLtJ_G0030577.1 mouse_genomes_project 6 60802847 60809388 + Ghrhr protein_coding retained_intron MGP_NODShiLtJ_T0077338.1 MGP_NODShiLtJ_G0030577.1 mouse_genomes_project 6 60802895 60816429 + MGP_NODShiLtJ_P0077338 Ghrhr protein_coding protein_coding MGP_NODShiLtJ_T0077339.1 MGP_NODShiLtJ_G0030577.1 mouse_genomes_project 6 60802917 60816218 + MGP_NODShiLtJ_P0077339 Ghrhr protein_coding protein_coding MGP_NODShiLtJ_T0076295.1 MGP_NODShiLtJ_G0030332.1 mouse_genomes_project 6 31608441 31611221 + MGP_NODShiLtJ_P0076295 Atp6v1f protein_coding protein_coding MGP_NODShiLtJ_T0076296.1 MGP_NODShiLtJ_G0030332.1 mouse_genomes_project 6 31608791 31611221 + MGP_NODShiLtJ_P0076296 Atp6v1f protein_coding protein_coding MGP_NODShiLtJ_T0076297.1 MGP_NODShiLtJ_G0030332.1 mouse_genomes_project 6 31608791 31611221 + MGP_NODShiLtJ_P0076297 Atp6v1f protein_coding protein_coding MGP_NODShiLtJ_T0076520.1 MGP_NODShiLtJ_G0030367.1 mouse_genomes_project 6 36935566 36947302 + MGP_NODShiLtJ_P0076520 Akr1b7 protein_coding protein_coding MGP_NODShiLtJ_T0077692.1 MGP_NODShiLtJ_G0030680.1 mouse_genomes_project 6 81257154 81260386 + MGP_NODShiLtJ_P0077692 Tmem150a protein_coding protein_coding MGP_NODShiLtJ_T0077693.1 MGP_NODShiLtJ_G0030680.1 mouse_genomes_project 6 81258112 81261321 + Tmem150a protein_coding processed_transcript MGP_NODShiLtJ_T0077694.1 MGP_NODShiLtJ_G0030680.1 mouse_genomes_project 6 81258209 81260737 + MGP_NODShiLtJ_P0077694 Tmem150a protein_coding protein_coding MGP_NODShiLtJ_T0077695.1 MGP_NODShiLtJ_G0030680.1 mouse_genomes_project 6 81258231 81261784 + MGP_NODShiLtJ_P0077695 Tmem150a protein_coding protein_coding MGP_NODShiLtJ_T0015131.1 MGP_NODShiLtJ_G0013239.1 mouse_genomes_project 6 10309610 10309908 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079407.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135366092 135410401 - MGP_NODShiLtJ_P0079407 Ccdc77 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079408.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135366092 135402027 - MGP_NODShiLtJ_P0079408 Ccdc77 protein_coding protein_coding MGP_NODShiLtJ_T0079409.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135366804 135402070 - MGP_NODShiLtJ_P0079409 Ccdc77 protein_coding protein_coding MGP_NODShiLtJ_T0079410.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135373783 135402008 - MGP_NODShiLtJ_P0079410 Ccdc77 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079411.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135376750 135401965 - MGP_NODShiLtJ_P0079411 Ccdc77 protein_coding protein_coding MGP_NODShiLtJ_T0079412.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135376783 135401938 - MGP_NODShiLtJ_P0079412 Ccdc77 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079413.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135379742 135401975 - Ccdc77 protein_coding retained_intron MGP_NODShiLtJ_T0079414.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135387271 135393410 - Ccdc77 protein_coding retained_intron MGP_NODShiLtJ_T0079415.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135393227 135410383 - MGP_NODShiLtJ_P0079415 Ccdc77 protein_coding protein_coding MGP_NODShiLtJ_T0079416.1 MGP_NODShiLtJ_G0031007.1 mouse_genomes_project 6 135398468 135401965 - Ccdc77 protein_coding retained_intron MGP_NODShiLtJ_T0015507.1 MGP_NODShiLtJ_G0013615.1 mouse_genomes_project 6 150338397 150338743 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004907.1 MGP_NODShiLtJ_G0004205.1 mouse_genomes_project 6 59821075 59830555 - Gm44026 antisense antisense MGP_NODShiLtJ_T0079441.1 MGP_NODShiLtJ_G0031013.1 mouse_genomes_project 6 135868224 135890612 + MGP_NODShiLtJ_P0079441 Slc25a18 protein_coding protein_coding MGP_NODShiLtJ_T0079229.1 MGP_NODShiLtJ_G0030979.1 mouse_genomes_project 6 131341536 131348833 - MGP_NODShiLtJ_P0079229 Zfp422 protein_coding protein_coding MGP_NODShiLtJ_T0079230.1 MGP_NODShiLtJ_G0030979.1 mouse_genomes_project 6 131342091 131348535 - MGP_NODShiLtJ_P0079230 Zfp422 protein_coding protein_coding MGP_NODShiLtJ_T0079231.1 MGP_NODShiLtJ_G0030979.1 mouse_genomes_project 6 131342091 131348756 - MGP_NODShiLtJ_P0079231 Zfp422 protein_coding protein_coding MGP_NODShiLtJ_T0079232.1 MGP_NODShiLtJ_G0030979.1 mouse_genomes_project 6 131342109 131346533 - Zfp422 protein_coding processed_transcript MGP_NODShiLtJ_T0008477.1 MGP_NODShiLtJ_G0006851.1 mouse_genomes_project 6 34035221 34039573 - Gm43293 lincRNA lincRNA MGP_NODShiLtJ_T0004924.1 MGP_NODShiLtJ_G0004219.1 mouse_genomes_project 6 81637999 81643881 + Gm15402 antisense antisense MGP_NODShiLtJ_T0001904.1 MGP_NODShiLtJ_G0001816.1 mouse_genomes_project 6 33590260 33592993 + TEC TEC MGP_NODShiLtJ_T0101172.1 MGP_NODShiLtJ_G0039493.1 mouse_genomes_project 6 45602576 45603425 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101173.1 MGP_NODShiLtJ_G0039493.1 mouse_genomes_project 6 45602984 45603344 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0002048.1 MGP_NODShiLtJ_G0001960.1 mouse_genomes_project 6 105230602 105231085 - TEC TEC MGP_NODShiLtJ_T0080130.1 MGP_NODShiLtJ_G0031173.1 mouse_genomes_project 6 146539482 146554776 - MGP_NODShiLtJ_P0080130 protein_coding protein_coding MGP_NODShiLtJ_T0080132.1 MGP_NODShiLtJ_G0031173.1 mouse_genomes_project 6 146539568 146554776 - MGP_NODShiLtJ_P0080132 protein_coding protein_coding MGP_NODShiLtJ_T0002646.1 MGP_NODShiLtJ_G0002525.1 mouse_genomes_project 6 44651539 44652027 + MGP_NODShiLtJ_P0002646 Trbv29 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0001940.1 MGP_NODShiLtJ_G0001852.1 mouse_genomes_project 6 56006688 56007654 + TEC TEC MGP_NODShiLtJ_T0100705.1 MGP_NODShiLtJ_G0039099.1 mouse_genomes_project 6 138927576 138927708 - Gm22833 snoRNA snoRNA MGP_NODShiLtJ_T0015383.1 MGP_NODShiLtJ_G0013491.1 mouse_genomes_project 6 112090291 112090757 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008689.1 MGP_NODShiLtJ_G0007013.1 mouse_genomes_project 6 161799934 161853266 + D6Ertd474e lincRNA lincRNA MGP_NODShiLtJ_T0008690.1 MGP_NODShiLtJ_G0007013.1 mouse_genomes_project 6 161799934 161803159 + D6Ertd474e lincRNA lincRNA MGP_NODShiLtJ_T0008691.1 MGP_NODShiLtJ_G0007013.1 mouse_genomes_project 6 161799939 161854830 + D6Ertd474e lincRNA lincRNA MGP_NODShiLtJ_T0008692.1 MGP_NODShiLtJ_G0007013.1 mouse_genomes_project 6 161799939 161853631 + D6Ertd474e lincRNA lincRNA MGP_NODShiLtJ_T0008693.1 MGP_NODShiLtJ_G0007013.1 mouse_genomes_project 6 161843613 161853595 + D6Ertd474e lincRNA lincRNA MGP_NODShiLtJ_T0018118.1 MGP_NODShiLtJ_G0015499.1 mouse_genomes_project 6 59603119 59774221 - 9130019P16Rik processed_transcript antisense MGP_NODShiLtJ_T0018119.1 MGP_NODShiLtJ_G0015499.1 mouse_genomes_project 6 59639180 59664624 - 9130019P16Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018120.1 MGP_NODShiLtJ_G0015499.1 mouse_genomes_project 6 59768597 59773555 - 9130019P16Rik processed_transcript lincRNA MGP_NODShiLtJ_T0080546.1 MGP_NODShiLtJ_G0031285.1 mouse_genomes_project 6 161710894 161767450 + MGP_NODShiLtJ_P0080546 Etnk1 protein_coding protein_coding MGP_NODShiLtJ_T0080547.1 MGP_NODShiLtJ_G0031285.1 mouse_genomes_project 6 161710903 161756459 + MGP_NODShiLtJ_P0080547 Etnk1 protein_coding protein_coding MGP_NODShiLtJ_T0080548.1 MGP_NODShiLtJ_G0031285.1 mouse_genomes_project 6 161710927 161737844 + Etnk1 protein_coding retained_intron MGP_NODShiLtJ_T0080549.1 MGP_NODShiLtJ_G0031285.1 mouse_genomes_project 6 161710927 161783783 + MGP_NODShiLtJ_P0080549 Etnk1 protein_coding protein_coding MGP_NODShiLtJ_T0002631.1 MGP_NODShiLtJ_G0002513.1 mouse_genomes_project 6 44470041 44470555 + MGP_NODShiLtJ_P0002631 Trbv12-2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002534.1 MGP_NODShiLtJ_G0002435.1 mouse_genomes_project 6 45004991 45005039 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0077409.1 MGP_NODShiLtJ_G0030604.1 mouse_genomes_project 6 63064129 63065247 + MGP_NODShiLtJ_P0077409 Vmn1r19 protein_coding protein_coding MGP_NODShiLtJ_T0000286.1 MGP_NODShiLtJ_G0000224.1 mouse_genomes_project 6 76514440 76514897 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0077370.1 MGP_NODShiLtJ_G0030584.1 mouse_genomes_project 6 62249464 62250878 + Avl9 protein_coding retained_intron MGP_NODShiLtJ_T0077371.1 MGP_NODShiLtJ_G0030584.1 mouse_genomes_project 6 62249492 62298784 + MGP_NODShiLtJ_P0077371 Avl9 protein_coding protein_coding MGP_NODShiLtJ_T0077372.1 MGP_NODShiLtJ_G0030584.1 mouse_genomes_project 6 62249503 62275503 + MGP_NODShiLtJ_P0077372 Avl9 protein_coding protein_coding MGP_NODShiLtJ_T0077373.1 MGP_NODShiLtJ_G0030584.1 mouse_genomes_project 6 62249507 62265679 + MGP_NODShiLtJ_P0077373 Avl9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077374.1 MGP_NODShiLtJ_G0030584.1 mouse_genomes_project 6 62279258 62290924 + Avl9 protein_coding retained_intron MGP_NODShiLtJ_T0078376.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99980074 99997067 - MGP_NODShiLtJ_P0078376 Sec61a1 protein_coding protein_coding MGP_NODShiLtJ_T0078377.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99981296 99982867 - Sec61a1 protein_coding processed_transcript MGP_NODShiLtJ_T0078378.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99982668 99990491 - Sec61a1 protein_coding processed_transcript MGP_NODShiLtJ_T0078379.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99982824 99992063 - Sec61a1 protein_coding retained_intron MGP_NODShiLtJ_T0078380.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99985174 99990809 - Sec61a1 protein_coding retained_intron MGP_NODShiLtJ_T0078381.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99990124 99990881 - Sec61a1 protein_coding retained_intron MGP_NODShiLtJ_T0078382.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99991972 99996935 - Sec61a1 protein_coding retained_intron MGP_NODShiLtJ_T0078383.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99992368 99994142 - Sec61a1 protein_coding retained_intron MGP_NODShiLtJ_T0078384.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99993487 99996990 - Sec61a1 protein_coding retained_intron MGP_NODShiLtJ_T0078385.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99993525 99996953 - Sec61a1 protein_coding processed_transcript MGP_NODShiLtJ_T0078386.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99993545 99997065 - Sec61a1 protein_coding retained_intron MGP_NODShiLtJ_T0078387.1 MGP_NODShiLtJ_G0030816.1 mouse_genomes_project 6 99996339 99996955 - Sec61a1 protein_coding processed_transcript MGP_NODShiLtJ_T0077915.1 MGP_NODShiLtJ_G0030729.1 mouse_genomes_project 6 94138915 94141149 - MGP_NODShiLtJ_P0077915 Wbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077916.1 MGP_NODShiLtJ_G0030729.1 mouse_genomes_project 6 94138921 94141437 - MGP_NODShiLtJ_P0077916 Wbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077917.1 MGP_NODShiLtJ_G0030729.1 mouse_genomes_project 6 94138922 94141437 - Wbp1 protein_coding retained_intron MGP_NODShiLtJ_T0077918.1 MGP_NODShiLtJ_G0030729.1 mouse_genomes_project 6 94139184 94141265 - MGP_NODShiLtJ_P0077918 Wbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077919.1 MGP_NODShiLtJ_G0030729.1 mouse_genomes_project 6 94139427 94140086 - MGP_NODShiLtJ_P0077919 Wbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077920.1 MGP_NODShiLtJ_G0030729.1 mouse_genomes_project 6 94139512 94140756 - Wbp1 protein_coding retained_intron MGP_NODShiLtJ_T0077921.1 MGP_NODShiLtJ_G0030729.1 mouse_genomes_project 6 94139517 94141137 - Wbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0077922.1 MGP_NODShiLtJ_G0030729.1 mouse_genomes_project 6 94140436 94141152 - MGP_NODShiLtJ_P0077922 Wbp1 protein_coding protein_coding MGP_NODShiLtJ_T0015221.1 MGP_NODShiLtJ_G0013329.1 mouse_genomes_project 6 54100612 54100814 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005050.1 MGP_NODShiLtJ_G0004306.1 mouse_genomes_project 6 152780445 152836222 + Gm44276 antisense antisense MGP_NODShiLtJ_T0080259.1 MGP_NODShiLtJ_G0031227.1 mouse_genomes_project 6 152686546 152725992 + MGP_NODShiLtJ_P0080259 Fam234b protein_coding protein_coding MGP_NODShiLtJ_T0080260.1 MGP_NODShiLtJ_G0031227.1 mouse_genomes_project 6 152686546 152734695 + MGP_NODShiLtJ_P0080260 Fam234b protein_coding protein_coding MGP_NODShiLtJ_T0080261.1 MGP_NODShiLtJ_G0031227.1 mouse_genomes_project 6 152686678 152699129 + MGP_NODShiLtJ_P0080261 Fam234b protein_coding protein_coding MGP_NODShiLtJ_T0080262.1 MGP_NODShiLtJ_G0031227.1 mouse_genomes_project 6 152686981 152699158 + MGP_NODShiLtJ_P0080262 Fam234b protein_coding protein_coding MGP_NODShiLtJ_T0080263.1 MGP_NODShiLtJ_G0031227.1 mouse_genomes_project 6 152721336 152725988 + Fam234b protein_coding retained_intron MGP_NODShiLtJ_T0079671.1 MGP_NODShiLtJ_G0031069.1 mouse_genomes_project 6 140514273 140515781 - Grcc10 protein_coding processed_transcript MGP_NODShiLtJ_T0079672.1 MGP_NODShiLtJ_G0031069.1 mouse_genomes_project 6 140514273 140516460 - MGP_NODShiLtJ_P0079672 Grcc10 protein_coding protein_coding MGP_NODShiLtJ_T0079673.1 MGP_NODShiLtJ_G0031069.1 mouse_genomes_project 6 140514276 140516151 - Grcc10 protein_coding retained_intron MGP_NODShiLtJ_T0079674.1 MGP_NODShiLtJ_G0031069.1 mouse_genomes_project 6 140514277 140515801 - Grcc10 protein_coding retained_intron MGP_NODShiLtJ_T0078475.1 MGP_NODShiLtJ_G0030832.1 mouse_genomes_project 6 101456738 101556448 - MGP_NODShiLtJ_P0078475 Vmn1r45 protein_coding protein_coding MGP_NODShiLtJ_T0099448.1 MGP_NODShiLtJ_G0037842.1 mouse_genomes_project 6 116799028 116799094 - Gm25656 snRNA snRNA MGP_NODShiLtJ_T0076381.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32602787 32630352 - MGP_NODShiLtJ_P0076381 Zc3hc1 protein_coding protein_coding MGP_NODShiLtJ_T0076382.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32602791 32630331 - MGP_NODShiLtJ_P0076382 Zc3hc1 protein_coding protein_coding MGP_NODShiLtJ_T0076383.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32602795 32605453 - Zc3hc1 protein_coding retained_intron MGP_NODShiLtJ_T0076384.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32602795 32630357 - MGP_NODShiLtJ_P0076384 Zc3hc1 protein_coding protein_coding MGP_NODShiLtJ_T0076385.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32602881 32630339 - MGP_NODShiLtJ_P0076385 Zc3hc1 protein_coding protein_coding MGP_NODShiLtJ_T0076386.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32608502 32611215 - Zc3hc1 protein_coding retained_intron MGP_NODShiLtJ_T0076387.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32611156 32630335 - MGP_NODShiLtJ_P0076387 Zc3hc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076388.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32613057 32620899 - Zc3hc1 protein_coding processed_transcript MGP_NODShiLtJ_T0076389.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32614237 32630318 - MGP_NODShiLtJ_P0076389 Zc3hc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076390.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32624354 32630339 - Zc3hc1 protein_coding retained_intron MGP_NODShiLtJ_T0076391.1 MGP_NODShiLtJ_G0030343.1 mouse_genomes_project 6 32626908 32630343 - Zc3hc1 protein_coding retained_intron MGP_NODShiLtJ_T0000174.1 MGP_NODShiLtJ_G0000127.1 mouse_genomes_project 6 76941874 76942653 + MGP_NODShiLtJ_P0000174 Igkv1-99 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000175.1 MGP_NODShiLtJ_G0000127.1 mouse_genomes_project 6 76941888 76942653 + MGP_NODShiLtJ_P0000175 Igkv1-99 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0011561.1 MGP_NODShiLtJ_G0009694.1 mouse_genomes_project 6 143900827 143901126 + Gm23098 misc_RNA misc_RNA MGP_NODShiLtJ_T0078017.1 MGP_NODShiLtJ_G0030748.1 mouse_genomes_project 6 94832799 94839749 - MGP_NODShiLtJ_P0078017 Tex261 protein_coding protein_coding MGP_NODShiLtJ_T0078018.1 MGP_NODShiLtJ_G0030748.1 mouse_genomes_project 6 94834325 94839726 - Tex261 protein_coding retained_intron MGP_NODShiLtJ_T0078019.1 MGP_NODShiLtJ_G0030748.1 mouse_genomes_project 6 94835099 94836387 - Tex261 protein_coding retained_intron MGP_NODShiLtJ_T0078020.1 MGP_NODShiLtJ_G0030748.1 mouse_genomes_project 6 94837518 94839694 - Tex261 protein_coding retained_intron MGP_NODShiLtJ_T0002005.1 MGP_NODShiLtJ_G0001917.1 mouse_genomes_project 6 97841130 97842868 + TEC TEC MGP_NODShiLtJ_T0015298.1 MGP_NODShiLtJ_G0013406.1 mouse_genomes_project 6 75787577 75788831 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079457.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136037200 136105504 - Mical3 protein_coding processed_transcript MGP_NODShiLtJ_T0079458.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136040273 136064708 - Mical3 protein_coding processed_transcript MGP_NODShiLtJ_T0079459.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136040317 136041027 - Mical3 protein_coding retained_intron MGP_NODShiLtJ_T0079460.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136056764 136063796 - Mical3 protein_coding processed_transcript MGP_NODShiLtJ_T0079461.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136064415 136105504 - Mical3 protein_coding processed_transcript MGP_NODShiLtJ_T0079462.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136066084 136072230 - Mical3 protein_coding processed_transcript MGP_NODShiLtJ_T0079463.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136099687 136125640 - MGP_NODShiLtJ_P0079463 Mical3 protein_coding protein_coding MGP_NODShiLtJ_T0079464.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136109592 136184125 - MGP_NODShiLtJ_P0079464 Mical3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079465.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136109592 136184127 - MGP_NODShiLtJ_P0079465 Mical3 protein_coding protein_coding MGP_NODShiLtJ_T0079466.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136109593 136125655 - MGP_NODShiLtJ_P0079466 Mical3 protein_coding protein_coding MGP_NODShiLtJ_T0079467.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136118999 136217070 - Mical3 protein_coding retained_intron MGP_NODShiLtJ_T0079468.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136118999 136125677 - Mical3 protein_coding processed_transcript MGP_NODShiLtJ_T0079469.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136125598 136239751 - MGP_NODShiLtJ_P0079469 Mical3 protein_coding protein_coding MGP_NODShiLtJ_T0079470.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136125777 136129151 - Mical3 protein_coding retained_intron MGP_NODShiLtJ_T0079471.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136128138 136128797 - Mical3 protein_coding processed_transcript MGP_NODShiLtJ_T0079472.1 MGP_NODShiLtJ_G0031017.1 mouse_genomes_project 6 136132327 136134152 - Mical3 protein_coding retained_intron MGP_NODShiLtJ_T0015216.1 MGP_NODShiLtJ_G0013324.1 mouse_genomes_project 6 53886498 53887744 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015392.1 MGP_NODShiLtJ_G0013500.1 mouse_genomes_project 6 115359043 115362641 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015117.1 MGP_NODShiLtJ_G0013225.1 mouse_genomes_project 6 3904761 3905827 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000289.1 MGP_NODShiLtJ_G0000227.1 mouse_genomes_project 6 76539284 76539679 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0001938.1 MGP_NODShiLtJ_G0001850.1 mouse_genomes_project 6 52451923 52453508 + TEC TEC MGP_NODShiLtJ_T0080128.1 MGP_NODShiLtJ_G0031171.1 mouse_genomes_project 6 146474985 146491727 - MGP_NODShiLtJ_P0080128 Klra4 protein_coding protein_coding MGP_NODShiLtJ_T0099436.1 MGP_NODShiLtJ_G0037830.1 mouse_genomes_project 6 86026182 86026345 - Gm22283 snRNA snRNA MGP_NODShiLtJ_T0079970.1 MGP_NODShiLtJ_G0031126.1 mouse_genomes_project 6 144315643 144368298 - MGP_NODShiLtJ_P0079970 Tead4 protein_coding protein_coding MGP_NODShiLtJ_T0079971.1 MGP_NODShiLtJ_G0031126.1 mouse_genomes_project 6 144318280 144393556 - MGP_NODShiLtJ_P0079971 Tead4 protein_coding protein_coding MGP_NODShiLtJ_T0079972.1 MGP_NODShiLtJ_G0031126.1 mouse_genomes_project 6 144319318 144393556 - MGP_NODShiLtJ_P0079972 Tead4 protein_coding protein_coding MGP_NODShiLtJ_T0079973.1 MGP_NODShiLtJ_G0031126.1 mouse_genomes_project 6 144363278 144393566 - MGP_NODShiLtJ_P0079973 Tead4 protein_coding protein_coding MGP_NODShiLtJ_T0079974.1 MGP_NODShiLtJ_G0031126.1 mouse_genomes_project 6 144363328 144393481 - MGP_NODShiLtJ_P0079974 Tead4 protein_coding protein_coding MGP_NODShiLtJ_T0078749.1 MGP_NODShiLtJ_G0030889.1 mouse_genomes_project 6 111941839 111984492 - MGP_NODShiLtJ_P0078749 Eif4e3 protein_coding protein_coding MGP_NODShiLtJ_T0077078.1 MGP_NODShiLtJ_G0030517.1 mouse_genomes_project 6 53752632 53759068 - MGP_NODShiLtJ_P0077078 Tmem176b protein_coding protein_coding MGP_NODShiLtJ_T0077079.1 MGP_NODShiLtJ_G0030517.1 mouse_genomes_project 6 53753201 53759345 - MGP_NODShiLtJ_P0077079 Tmem176b protein_coding protein_coding MGP_NODShiLtJ_T0077080.1 MGP_NODShiLtJ_G0030517.1 mouse_genomes_project 6 53754028 53759662 - MGP_NODShiLtJ_P0077080 Tmem176b protein_coding protein_coding MGP_NODShiLtJ_T0077081.1 MGP_NODShiLtJ_G0030517.1 mouse_genomes_project 6 53754028 53760080 - MGP_NODShiLtJ_P0077081 Tmem176b protein_coding protein_coding MGP_NODShiLtJ_T0077082.1 MGP_NODShiLtJ_G0030517.1 mouse_genomes_project 6 53754030 53759332 - MGP_NODShiLtJ_P0077082 Tmem176b protein_coding protein_coding MGP_NODShiLtJ_T0077083.1 MGP_NODShiLtJ_G0030517.1 mouse_genomes_project 6 53754097 53759179 - MGP_NODShiLtJ_P0077083 Tmem176b protein_coding protein_coding MGP_NODShiLtJ_T0077084.1 MGP_NODShiLtJ_G0030517.1 mouse_genomes_project 6 53754382 53759039 - Tmem176b protein_coding retained_intron MGP_NODShiLtJ_T0079169.1 MGP_NODShiLtJ_G0030969.1 mouse_genomes_project 6 130556226 130598084 - MGP_NODShiLtJ_P0079169 Plxnd1 protein_coding protein_coding MGP_NODShiLtJ_T0079170.1 MGP_NODShiLtJ_G0030969.1 mouse_genomes_project 6 130557056 130558260 - Plxnd1 protein_coding retained_intron MGP_NODShiLtJ_T0079171.1 MGP_NODShiLtJ_G0030969.1 mouse_genomes_project 6 130557222 130557786 - Plxnd1 protein_coding retained_intron MGP_NODShiLtJ_T0079172.1 MGP_NODShiLtJ_G0030969.1 mouse_genomes_project 6 130559984 130561449 - Plxnd1 protein_coding retained_intron MGP_NODShiLtJ_T0079173.1 MGP_NODShiLtJ_G0030969.1 mouse_genomes_project 6 130568380 130570844 - MGP_NODShiLtJ_P0079173 Plxnd1 protein_coding protein_coding MGP_NODShiLtJ_T0076759.1 MGP_NODShiLtJ_G0030415.1 mouse_genomes_project 6 43694945 43715477 + MGP_NODShiLtJ_P0076759 Wee2 protein_coding protein_coding MGP_NODShiLtJ_T0076760.1 MGP_NODShiLtJ_G0030415.1 mouse_genomes_project 6 43699790 43727513 + MGP_NODShiLtJ_P0076760 Wee2 protein_coding protein_coding MGP_NODShiLtJ_T0076761.1 MGP_NODShiLtJ_G0030415.1 mouse_genomes_project 6 43699864 43701082 + MGP_NODShiLtJ_P0076761 Wee2 protein_coding protein_coding MGP_NODShiLtJ_T0077992.1 MGP_NODShiLtJ_G0030741.1 mouse_genomes_project 6 94559111 94581812 - MGP_NODShiLtJ_P0077992 Actg2 protein_coding protein_coding MGP_NODShiLtJ_T0077993.1 MGP_NODShiLtJ_G0030741.1 mouse_genomes_project 6 94559118 94573897 - MGP_NODShiLtJ_P0077993 Actg2 protein_coding protein_coding MGP_NODShiLtJ_T0077994.1 MGP_NODShiLtJ_G0030741.1 mouse_genomes_project 6 94565889 94572824 - Actg2 protein_coding processed_transcript MGP_NODShiLtJ_T0077995.1 MGP_NODShiLtJ_G0030741.1 mouse_genomes_project 6 94565889 94581770 - MGP_NODShiLtJ_P0077995 Actg2 protein_coding protein_coding MGP_NODShiLtJ_T0077996.1 MGP_NODShiLtJ_G0030741.1 mouse_genomes_project 6 94566030 94573397 - MGP_NODShiLtJ_P0077996 Actg2 protein_coding protein_coding MGP_NODShiLtJ_T0077997.1 MGP_NODShiLtJ_G0030741.1 mouse_genomes_project 6 94566806 94573717 - MGP_NODShiLtJ_P0077997 Actg2 protein_coding protein_coding MGP_NODShiLtJ_T0008553.1 MGP_NODShiLtJ_G0006907.1 mouse_genomes_project 6 80137798 80144583 - Gm44175 lincRNA lincRNA MGP_NODShiLtJ_T0002080.1 MGP_NODShiLtJ_G0001992.1 mouse_genomes_project 6 130207466 130207876 + TEC TEC MGP_NODShiLtJ_T0015525.1 MGP_NODShiLtJ_G0013633.1 mouse_genomes_project 6 158654137 158656526 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001906.1 MGP_NODShiLtJ_G0001818.1 mouse_genomes_project 6 35879359 35880971 + TEC TEC MGP_NODShiLtJ_T0015195.1 MGP_NODShiLtJ_G0013303.1 mouse_genomes_project 6 46271792 46272224 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008618.1 MGP_NODShiLtJ_G0006957.1 mouse_genomes_project 6 114344124 114382395 + Gm9871 lincRNA lincRNA MGP_NODShiLtJ_T0008619.1 MGP_NODShiLtJ_G0006957.1 mouse_genomes_project 6 114353980 114382228 + Gm9871 lincRNA lincRNA MGP_NODShiLtJ_T0008620.1 MGP_NODShiLtJ_G0006957.1 mouse_genomes_project 6 114376643 114382023 + Gm9871 lincRNA lincRNA MGP_NODShiLtJ_T0010681.1 MGP_NODShiLtJ_G0008814.1 mouse_genomes_project 6 106514312 106514364 - Mir7041 miRNA miRNA MGP_NODShiLtJ_T0018162.1 MGP_NODShiLtJ_G0015516.1 mouse_genomes_project 6 145932439 145934307 - 1700101I11Rik processed_transcript TEC MGP_NODShiLtJ_T0018163.1 MGP_NODShiLtJ_G0015516.1 mouse_genomes_project 6 145932583 145933774 - 1700101I11Rik processed_transcript antisense MGP_NODShiLtJ_T0076604.1 MGP_NODShiLtJ_G0030381.1 mouse_genomes_project 6 39173995 39324089 + MGP_NODShiLtJ_P0076604 Chrm2 protein_coding protein_coding MGP_NODShiLtJ_T0076605.1 MGP_NODShiLtJ_G0030381.1 mouse_genomes_project 6 39174106 39237009 + Chrm2 protein_coding processed_transcript MGP_NODShiLtJ_T0100718.1 MGP_NODShiLtJ_G0039112.1 mouse_genomes_project 6 141066121 141066250 - Gm24175 snoRNA snoRNA MGP_NODShiLtJ_T0100680.1 MGP_NODShiLtJ_G0039074.1 mouse_genomes_project 6 76473889 76474016 - Gm22598 snoRNA snoRNA MGP_NODShiLtJ_T0008475.1 MGP_NODShiLtJ_G0006850.1 mouse_genomes_project 6 33992407 33996319 - lincRNA lincRNA MGP_NODShiLtJ_T0078367.1 MGP_NODShiLtJ_G0030814.1 mouse_genomes_project 6 99718481 99916857 - MGP_NODShiLtJ_P0078367 Eefsec protein_coding protein_coding MGP_NODShiLtJ_T0078368.1 MGP_NODShiLtJ_G0030814.1 mouse_genomes_project 6 99719020 99916845 - MGP_NODShiLtJ_P0078368 Eefsec protein_coding protein_coding MGP_NODShiLtJ_T0078369.1 MGP_NODShiLtJ_G0030814.1 mouse_genomes_project 6 99719420 99916832 - MGP_NODShiLtJ_P0078369 Eefsec protein_coding protein_coding MGP_NODShiLtJ_T0078370.1 MGP_NODShiLtJ_G0030814.1 mouse_genomes_project 6 99742877 99916820 - MGP_NODShiLtJ_P0078370 Eefsec protein_coding protein_coding MGP_NODShiLtJ_T0078371.1 MGP_NODShiLtJ_G0030814.1 mouse_genomes_project 6 99759376 99909608 - MGP_NODShiLtJ_P0078371 Eefsec protein_coding protein_coding MGP_NODShiLtJ_T0078372.1 MGP_NODShiLtJ_G0030814.1 mouse_genomes_project 6 99759559 99916802 - MGP_NODShiLtJ_P0078372 Eefsec protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015318.1 MGP_NODShiLtJ_G0013426.1 mouse_genomes_project 6 82908134 82908320 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077221.1 MGP_NODShiLtJ_G0030552.1 mouse_genomes_project 6 57437482 57441224 - MGP_NODShiLtJ_P0077221 Hoxa10 protein_coding protein_coding MGP_NODShiLtJ_T0077222.1 MGP_NODShiLtJ_G0030552.1 mouse_genomes_project 6 57437484 57439609 - Hoxa10 protein_coding processed_transcript MGP_NODShiLtJ_T0077223.1 MGP_NODShiLtJ_G0030552.1 mouse_genomes_project 6 57438206 57447139 - MGP_NODShiLtJ_P0077223 Hoxa10 protein_coding protein_coding MGP_NODShiLtJ_T0077224.1 MGP_NODShiLtJ_G0030552.1 mouse_genomes_project 6 57438366 57447080 - Hoxa10 protein_coding processed_transcript MGP_NODShiLtJ_T0001939.1 MGP_NODShiLtJ_G0001851.1 mouse_genomes_project 6 54198710 54200149 + TEC TEC MGP_NODShiLtJ_T0008622.1 MGP_NODShiLtJ_G0006959.1 mouse_genomes_project 6 118880173 118886559 - lincRNA lincRNA MGP_NODShiLtJ_T0080183.1 MGP_NODShiLtJ_G0031209.1 mouse_genomes_project 6 150244282 150245282 - MGP_NODShiLtJ_P0080183 Tas2r140 protein_coding protein_coding MGP_NODShiLtJ_T0077402.1 MGP_NODShiLtJ_G0030598.1 mouse_genomes_project 6 62891915 62893444 + MGP_NODShiLtJ_P0077402 Vmn1r14 protein_coding protein_coding MGP_NODShiLtJ_T0015370.1 MGP_NODShiLtJ_G0013478.1 mouse_genomes_project 6 106309140 106309556 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077610.1 MGP_NODShiLtJ_G0030666.1 mouse_genomes_project 6 80174883 80233696 - MGP_NODShiLtJ_P0077610 Rmnd5a protein_coding protein_coding MGP_NODShiLtJ_T0077611.1 MGP_NODShiLtJ_G0030666.1 mouse_genomes_project 6 80176714 80182530 - Rmnd5a protein_coding processed_transcript MGP_NODShiLtJ_T0077612.1 MGP_NODShiLtJ_G0030666.1 mouse_genomes_project 6 80177581 80182435 - Rmnd5a protein_coding processed_transcript MGP_NODShiLtJ_T0077613.1 MGP_NODShiLtJ_G0030666.1 mouse_genomes_project 6 80180707 80183447 - Rmnd5a protein_coding retained_intron MGP_NODShiLtJ_T0075922.1 MGP_NODShiLtJ_G0030257.1 mouse_genomes_project 6 5554536 5783786 + MGP_NODShiLtJ_P0075922 Umad1 protein_coding protein_coding MGP_NODShiLtJ_T0075923.1 MGP_NODShiLtJ_G0030257.1 mouse_genomes_project 6 5554598 5747568 + MGP_NODShiLtJ_P0075923 Umad1 protein_coding protein_coding MGP_NODShiLtJ_T0075924.1 MGP_NODShiLtJ_G0030257.1 mouse_genomes_project 6 5554630 5749193 + MGP_NODShiLtJ_P0075924 Umad1 protein_coding protein_coding MGP_NODShiLtJ_T0075925.1 MGP_NODShiLtJ_G0030257.1 mouse_genomes_project 6 5554676 5747709 + MGP_NODShiLtJ_P0075925 Umad1 protein_coding protein_coding MGP_NODShiLtJ_T0075926.1 MGP_NODShiLtJ_G0030257.1 mouse_genomes_project 6 5554678 5749190 + MGP_NODShiLtJ_P0075926 Umad1 protein_coding protein_coding MGP_NODShiLtJ_T0075927.1 MGP_NODShiLtJ_G0030257.1 mouse_genomes_project 6 5554692 5575981 + Umad1 protein_coding processed_transcript MGP_NODShiLtJ_T0075929.1 MGP_NODShiLtJ_G0030257.1 mouse_genomes_project 6 5565705 5749196 + MGP_NODShiLtJ_P0075929 Umad1 protein_coding protein_coding MGP_NODShiLtJ_T0075930.1 MGP_NODShiLtJ_G0030257.1 mouse_genomes_project 6 5740097 5748667 + Umad1 protein_coding processed_transcript MGP_NODShiLtJ_T0004925.1 MGP_NODShiLtJ_G0004220.1 mouse_genomes_project 6 81990007 81999679 + Gm44031 antisense antisense MGP_NODShiLtJ_T0008705.1 MGP_NODShiLtJ_G0007023.1 mouse_genomes_project 6 166497655 166509788 + 1700049E15Rik lincRNA lincRNA MGP_NODShiLtJ_T0008706.1 MGP_NODShiLtJ_G0007023.1 mouse_genomes_project 6 166502144 166509762 + 1700049E15Rik lincRNA lincRNA MGP_NODShiLtJ_T0100706.1 MGP_NODShiLtJ_G0039100.1 mouse_genomes_project 6 139012768 139012900 + Gm25065 snoRNA snoRNA MGP_NODShiLtJ_T0077205.1 MGP_NODShiLtJ_G0030546.1 mouse_genomes_project 6 57382758 57386110 + MGP_NODShiLtJ_P0077205 5730596B20Rik protein_coding protein_coding MGP_NODShiLtJ_T0076458.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33701799 33831574 + MGP_NODShiLtJ_P0076458 Mkln1 protein_coding protein_coding MGP_NODShiLtJ_T0076459.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33701892 33779767 + Mkln1 protein_coding retained_intron MGP_NODShiLtJ_T0076460.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33701893 33741345 + Mkln1 protein_coding retained_intron MGP_NODShiLtJ_T0076461.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33701900 33724086 + Mkln1 protein_coding retained_intron MGP_NODShiLtJ_T0076462.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33701909 33708194 + Mkln1 protein_coding retained_intron MGP_NODShiLtJ_T0076463.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33701909 33735317 + Mkln1 protein_coding retained_intron MGP_NODShiLtJ_T0076464.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33701923 33738459 + Mkln1 protein_coding processed_transcript MGP_NODShiLtJ_T0076465.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33735131 33800394 + Mkln1 protein_coding processed_transcript MGP_NODShiLtJ_T0076466.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33735165 33783257 + Mkln1 protein_coding processed_transcript MGP_NODShiLtJ_T0076467.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33776997 33806118 + Mkln1 protein_coding retained_intron MGP_NODShiLtJ_T0076468.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33785711 33790446 + Mkln1 protein_coding retained_intron MGP_NODShiLtJ_T0076469.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33800376 33822735 + MGP_NODShiLtJ_P0076469 Mkln1 protein_coding protein_coding MGP_NODShiLtJ_T0076470.1 MGP_NODShiLtJ_G0030356.1 mouse_genomes_project 6 33806045 33822614 + Mkln1 protein_coding retained_intron MGP_NODShiLtJ_T0015356.1 MGP_NODShiLtJ_G0013464.1 mouse_genomes_project 6 99390798 99391212 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100690.1 MGP_NODShiLtJ_G0039084.1 mouse_genomes_project 6 96356742 96356858 + Gm22893 snoRNA snoRNA MGP_NODShiLtJ_T0000208.1 MGP_NODShiLtJ_G0000150.1 mouse_genomes_project 6 78767417 78767998 - MGP_NODShiLtJ_P0000208 Igkv6-32 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0080401.1 MGP_NODShiLtJ_G0031255.1 mouse_genomes_project 6 157663750 157674816 - MGP_NODShiLtJ_P0080401 Rergl protein_coding protein_coding MGP_NODShiLtJ_T0077895.1 MGP_NODShiLtJ_G0030722.1 mouse_genomes_project 6 94068987 94070889 - MGP_NODShiLtJ_P0077895 Tlx2 protein_coding protein_coding MGP_NODShiLtJ_T0077896.1 MGP_NODShiLtJ_G0030722.1 mouse_genomes_project 6 94069254 94070957 - MGP_NODShiLtJ_P0077896 Tlx2 protein_coding protein_coding MGP_NODShiLtJ_T0015302.1 MGP_NODShiLtJ_G0013410.1 mouse_genomes_project 6 75999021 76516512 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076186.1 MGP_NODShiLtJ_G0030309.1 mouse_genomes_project 6 25875939 25916919 + MGP_NODShiLtJ_P0076186 Hyal5 protein_coding protein_coding MGP_NODShiLtJ_T0076187.1 MGP_NODShiLtJ_G0030309.1 mouse_genomes_project 6 25900388 25916766 + MGP_NODShiLtJ_P0076187 Hyal5 protein_coding protein_coding MGP_NODShiLtJ_T0076188.1 MGP_NODShiLtJ_G0030309.1 mouse_genomes_project 6 25915497 25916706 + Hyal5 protein_coding processed_transcript MGP_NODShiLtJ_T0078291.1 MGP_NODShiLtJ_G0030798.1 mouse_genomes_project 6 98860398 98903072 - Arhgap25 protein_coding retained_intron MGP_NODShiLtJ_T0078292.1 MGP_NODShiLtJ_G0030798.1 mouse_genomes_project 6 98860398 98941574 - MGP_NODShiLtJ_P0078292 Arhgap25 protein_coding protein_coding MGP_NODShiLtJ_T0078293.1 MGP_NODShiLtJ_G0030798.1 mouse_genomes_project 6 98861264 98903003 - MGP_NODShiLtJ_P0078293 Arhgap25 protein_coding protein_coding MGP_NODShiLtJ_T0078294.1 MGP_NODShiLtJ_G0030798.1 mouse_genomes_project 6 98861988 98865511 - Arhgap25 protein_coding retained_intron MGP_NODShiLtJ_T0008565.1 MGP_NODShiLtJ_G0006919.1 mouse_genomes_project 6 92917183 92918174 - Gm44202 lincRNA lincRNA MGP_NODShiLtJ_T0004891.1 MGP_NODShiLtJ_G0004196.1 mouse_genomes_project 6 53910810 53923814 - 4930563H07Rik antisense antisense MGP_NODShiLtJ_T0002060.1 MGP_NODShiLtJ_G0001972.1 mouse_genomes_project 6 113774171 113776856 - TEC TEC MGP_NODShiLtJ_T0075976.1 MGP_NODShiLtJ_G0030266.1 mouse_genomes_project 6 11618161 11710932 - MGP_NODShiLtJ_P0075976 protein_coding protein_coding MGP_NODShiLtJ_T0075977.1 MGP_NODShiLtJ_G0030266.1 mouse_genomes_project 6 11636041 11639941 - protein_coding retained_intron MGP_NODShiLtJ_T0075978.1 MGP_NODShiLtJ_G0030266.1 mouse_genomes_project 6 11652292 11710932 - MGP_NODShiLtJ_P0075978 protein_coding protein_coding MGP_NODShiLtJ_T0077227.1 MGP_NODShiLtJ_G0030554.1 mouse_genomes_project 6 57464970 57469892 - MGP_NODShiLtJ_P0077227 Hoxa13 protein_coding protein_coding MGP_NODShiLtJ_T0077228.1 MGP_NODShiLtJ_G0030554.1 mouse_genomes_project 6 57466147 57469891 - Hoxa13 protein_coding processed_transcript MGP_NODShiLtJ_T0077229.1 MGP_NODShiLtJ_G0030554.1 mouse_genomes_project 6 57466147 57469891 - Hoxa13 protein_coding processed_transcript MGP_NODShiLtJ_T0077230.1 MGP_NODShiLtJ_G0030554.1 mouse_genomes_project 6 57466147 57469891 - Hoxa13 protein_coding processed_transcript MGP_NODShiLtJ_T0077231.1 MGP_NODShiLtJ_G0030554.1 mouse_genomes_project 6 57466147 57469891 - MGP_NODShiLtJ_P0077231 Hoxa13 protein_coding protein_coding MGP_NODShiLtJ_T0015277.1 MGP_NODShiLtJ_G0013385.1 mouse_genomes_project 6 73346210 73347999 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015402.1 MGP_NODShiLtJ_G0013510.1 mouse_genomes_project 6 121205248 121205897 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015301.1 MGP_NODShiLtJ_G0013409.1 mouse_genomes_project 6 75999018 76516512 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008650.1 MGP_NODShiLtJ_G0006985.1 mouse_genomes_project 6 140072179 140074823 + Gm44006 lincRNA lincRNA MGP_NODShiLtJ_T0077777.1 MGP_NODShiLtJ_G0030695.1 mouse_genomes_project 6 82225242 82255140 + MGP_NODShiLtJ_P0077777 Suclg1 protein_coding protein_coding MGP_NODShiLtJ_T0077778.1 MGP_NODShiLtJ_G0030695.1 mouse_genomes_project 6 82225512 82240949 + MGP_NODShiLtJ_P0077778 Suclg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077779.1 MGP_NODShiLtJ_G0030695.1 mouse_genomes_project 6 82225520 82255133 + MGP_NODShiLtJ_P0077779 Suclg1 protein_coding protein_coding MGP_NODShiLtJ_T0077780.1 MGP_NODShiLtJ_G0030695.1 mouse_genomes_project 6 82225521 82234283 + Suclg1 protein_coding processed_transcript MGP_NODShiLtJ_T0077781.1 MGP_NODShiLtJ_G0030695.1 mouse_genomes_project 6 82225528 82239712 + Suclg1 protein_coding retained_intron MGP_NODShiLtJ_T0077782.1 MGP_NODShiLtJ_G0030695.1 mouse_genomes_project 6 82237048 82240945 + Suclg1 protein_coding retained_intron MGP_NODShiLtJ_T0015477.1 MGP_NODShiLtJ_G0013585.1 mouse_genomes_project 6 143807743 143807969 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102001.1 MGP_NODShiLtJ_G0040169.1 mouse_genomes_project 6 63931407 63931512 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0079646.1 MGP_NODShiLtJ_G0031066.1 mouse_genomes_project 6 140473672 140478001 - Emg1 protein_coding retained_intron MGP_NODShiLtJ_T0079647.1 MGP_NODShiLtJ_G0031066.1 mouse_genomes_project 6 140473968 140485482 - MGP_NODShiLtJ_P0079647 Emg1 protein_coding protein_coding MGP_NODShiLtJ_T0079648.1 MGP_NODShiLtJ_G0031066.1 mouse_genomes_project 6 140473969 140475247 - Emg1 protein_coding processed_transcript MGP_NODShiLtJ_T0079649.1 MGP_NODShiLtJ_G0031066.1 mouse_genomes_project 6 140474045 140485373 - Emg1 protein_coding retained_intron MGP_NODShiLtJ_T0079650.1 MGP_NODShiLtJ_G0031066.1 mouse_genomes_project 6 140474538 140485445 - Emg1 protein_coding retained_intron MGP_NODShiLtJ_T0079651.1 MGP_NODShiLtJ_G0031066.1 mouse_genomes_project 6 140474747 140485361 - MGP_NODShiLtJ_P0079651 Emg1 protein_coding protein_coding MGP_NODShiLtJ_T0015252.1 MGP_NODShiLtJ_G0013360.1 mouse_genomes_project 6 66246789 66247747 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004890.1 MGP_NODShiLtJ_G0004195.1 mouse_genomes_project 6 53514143 53522532 - Gm44119 antisense antisense MGP_NODShiLtJ_T0008507.1 MGP_NODShiLtJ_G0006870.1 mouse_genomes_project 6 53668347 53669524 - Gm44226 lincRNA lincRNA MGP_NODShiLtJ_T0099449.1 MGP_NODShiLtJ_G0037843.1 mouse_genomes_project 6 120685618 120685725 + Gm22418 snRNA snRNA MGP_NODShiLtJ_T0080584.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163857456 163887842 - Casc1 protein_coding retained_intron MGP_NODShiLtJ_T0080585.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163857456 163894240 - MGP_NODShiLtJ_P0080585 Casc1 protein_coding protein_coding MGP_NODShiLtJ_T0080586.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163857456 163894061 - MGP_NODShiLtJ_P0080586 Casc1 protein_coding protein_coding MGP_NODShiLtJ_T0080587.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163857564 163894144 - MGP_NODShiLtJ_P0080587 Casc1 protein_coding protein_coding MGP_NODShiLtJ_T0080588.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163872753 163894169 - Casc1 protein_coding retained_intron MGP_NODShiLtJ_T0080589.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163875404 163894139 - Casc1 protein_coding processed_transcript MGP_NODShiLtJ_T0080590.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163885380 163894149 - Casc1 protein_coding retained_intron MGP_NODShiLtJ_T0080591.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163886762 163894179 - Casc1 protein_coding retained_intron MGP_NODShiLtJ_T0080592.1 MGP_NODShiLtJ_G0031289.1 mouse_genomes_project 6 163890580 163894275 - Casc1 protein_coding retained_intron MGP_NODShiLtJ_T0005039.1 MGP_NODShiLtJ_G0004297.1 mouse_genomes_project 6 144547701 144591798 + Gm10069 antisense antisense MGP_NODShiLtJ_T0005040.1 MGP_NODShiLtJ_G0004297.1 mouse_genomes_project 6 144548285 144620192 + Gm10069 antisense antisense MGP_NODShiLtJ_T0005041.1 MGP_NODShiLtJ_G0004297.1 mouse_genomes_project 6 144588956 144605233 + Gm10069 antisense antisense MGP_NODShiLtJ_T0079817.1 MGP_NODShiLtJ_G0031092.1 mouse_genomes_project 6 140934729 140947632 + MGP_NODShiLtJ_P0079817 Nop2 protein_coding protein_coding MGP_NODShiLtJ_T0079818.1 MGP_NODShiLtJ_G0031092.1 mouse_genomes_project 6 140934867 140937537 + MGP_NODShiLtJ_P0079818 Nop2 protein_coding protein_coding MGP_NODShiLtJ_T0078424.1 MGP_NODShiLtJ_G0030821.1 mouse_genomes_project 6 100366395 100383568 - MGP_NODShiLtJ_P0078424 Mcm2 protein_coding protein_coding MGP_NODShiLtJ_T0078425.1 MGP_NODShiLtJ_G0030821.1 mouse_genomes_project 6 100372206 100375700 - Mcm2 protein_coding retained_intron MGP_NODShiLtJ_T0078426.1 MGP_NODShiLtJ_G0030821.1 mouse_genomes_project 6 100373666 100376970 - MGP_NODShiLtJ_P0078426 Mcm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078427.1 MGP_NODShiLtJ_G0030821.1 mouse_genomes_project 6 100376826 100383489 - Mcm2 protein_coding processed_transcript MGP_NODShiLtJ_T0078428.1 MGP_NODShiLtJ_G0030821.1 mouse_genomes_project 6 100376937 100383476 - MGP_NODShiLtJ_P0078428 Mcm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078429.1 MGP_NODShiLtJ_G0030821.1 mouse_genomes_project 6 100376953 100377512 - Mcm2 protein_coding retained_intron MGP_NODShiLtJ_T0078430.1 MGP_NODShiLtJ_G0030821.1 mouse_genomes_project 6 100381735 100383465 - Mcm2 protein_coding retained_intron MGP_NODShiLtJ_T0010697.1 MGP_NODShiLtJ_G0008830.1 mouse_genomes_project 6 133293382 133293465 + Gm25953 miRNA miRNA MGP_NODShiLtJ_T0079916.1 MGP_NODShiLtJ_G0031114.1 mouse_genomes_project 6 142857031 142904628 - MGP_NODShiLtJ_P0079916 Dyrk4 protein_coding protein_coding MGP_NODShiLtJ_T0079917.1 MGP_NODShiLtJ_G0031114.1 mouse_genomes_project 6 142857204 142866395 - MGP_NODShiLtJ_P0079917 Dyrk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079918.1 MGP_NODShiLtJ_G0031114.1 mouse_genomes_project 6 142857210 142890315 - Dyrk4 protein_coding processed_transcript MGP_NODShiLtJ_T0015488.1 MGP_NODShiLtJ_G0013596.1 mouse_genomes_project 6 146127897 146128463 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015546.1 MGP_NODShiLtJ_G0013654.1 mouse_genomes_project 6 168323331 168323776 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100674.1 MGP_NODShiLtJ_G0039068.1 mouse_genomes_project 6 65187583 65187715 + Gm22367 snoRNA snoRNA MGP_NODShiLtJ_T0076057.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17099082 17245333 + St7 protein_coding retained_intron MGP_NODShiLtJ_T0076058.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17100148 17363837 + MGP_NODShiLtJ_P0076058 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076059.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17100195 17363837 + MGP_NODShiLtJ_P0076059 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076060.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17100233 17363780 + MGP_NODShiLtJ_P0076060 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076061.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17100233 17363780 + MGP_NODShiLtJ_P0076061 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076062.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17100233 17363780 + MGP_NODShiLtJ_P0076062 St7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076063.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17100233 17363840 + MGP_NODShiLtJ_P0076063 St7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076064.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17100233 17279345 + MGP_NODShiLtJ_P0076064 St7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076065.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17100371 17363780 + MGP_NODShiLtJ_P0076065 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076066.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17161352 17363780 + MGP_NODShiLtJ_P0076066 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076067.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17161352 17363780 + MGP_NODShiLtJ_P0076067 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076068.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17166929 17328442 + St7 protein_coding processed_transcript MGP_NODShiLtJ_T0076069.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17166929 17363840 + MGP_NODShiLtJ_P0076069 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076070.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17166975 17363835 + MGP_NODShiLtJ_P0076070 St7 protein_coding protein_coding MGP_NODShiLtJ_T0076071.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17167055 17261069 + St7 protein_coding retained_intron MGP_NODShiLtJ_T0076072.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17167092 17363837 + St7 protein_coding retained_intron MGP_NODShiLtJ_T0076073.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17167155 17363816 + St7 protein_coding retained_intron MGP_NODShiLtJ_T0076074.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17264882 17272875 + St7 protein_coding processed_transcript MGP_NODShiLtJ_T0076075.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17264901 17326867 + St7 protein_coding processed_transcript MGP_NODShiLtJ_T0076076.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17279300 17328428 + St7 protein_coding processed_transcript MGP_NODShiLtJ_T0076077.1 MGP_NODShiLtJ_G0030280.1 mouse_genomes_project 6 17327520 17363749 + St7 protein_coding processed_transcript MGP_NODShiLtJ_T0001948.1 MGP_NODShiLtJ_G0001860.1 mouse_genomes_project 6 60306048 60309356 + TEC TEC MGP_NODShiLtJ_T0001955.1 MGP_NODShiLtJ_G0001867.1 mouse_genomes_project 6 67385232 67389260 - TEC TEC MGP_NODShiLtJ_T0002133.1 MGP_NODShiLtJ_G0002045.1 mouse_genomes_project 6 164605039 164606943 + TEC TEC MGP_NODShiLtJ_T0000311.1 MGP_NODShiLtJ_G0000249.1 mouse_genomes_project 6 78312609 78312989 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0075892.1 MGP_NODShiLtJ_G0030247.1 mouse_genomes_project 6 3730142 3756512 - MGP_NODShiLtJ_P0075892 Shfm1 protein_coding protein_coding MGP_NODShiLtJ_T0075893.1 MGP_NODShiLtJ_G0030247.1 mouse_genomes_project 6 3754267 3756517 - Shfm1 protein_coding retained_intron MGP_NODShiLtJ_T0008671.1 MGP_NODShiLtJ_G0007001.1 mouse_genomes_project 6 152386637 152387762 - Gm44238 lincRNA lincRNA MGP_NODShiLtJ_T0077616.1 MGP_NODShiLtJ_G0030668.1 mouse_genomes_project 6 80363678 80380652 + Chmp3 protein_coding processed_transcript MGP_NODShiLtJ_T0077617.1 MGP_NODShiLtJ_G0030668.1 mouse_genomes_project 6 80363755 80397953 + MGP_NODShiLtJ_P0077617 Chmp3 protein_coding protein_coding MGP_NODShiLtJ_T0077618.1 MGP_NODShiLtJ_G0030668.1 mouse_genomes_project 6 80363755 80380671 + MGP_NODShiLtJ_P0077618 Chmp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077619.1 MGP_NODShiLtJ_G0030668.1 mouse_genomes_project 6 80363815 80399946 + MGP_NODShiLtJ_P0077619 Chmp3 protein_coding protein_coding MGP_NODShiLtJ_T0077620.1 MGP_NODShiLtJ_G0030668.1 mouse_genomes_project 6 80364179 80394286 + Chmp3 protein_coding processed_transcript MGP_NODShiLtJ_T0077621.1 MGP_NODShiLtJ_G0030668.1 mouse_genomes_project 6 80397749 80399973 + Chmp3 protein_coding retained_intron MGP_NODShiLtJ_T0015344.1 MGP_NODShiLtJ_G0013452.1 mouse_genomes_project 6 96259519 96260047 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005073.1 MGP_NODShiLtJ_G0004326.1 mouse_genomes_project 6 166232130 166276114 - Gm6288 antisense antisense MGP_NODShiLtJ_T0005074.1 MGP_NODShiLtJ_G0004326.1 mouse_genomes_project 6 166275432 166276345 - Gm6288 antisense antisense MGP_NODShiLtJ_T0078483.1 MGP_NODShiLtJ_G0030837.1 mouse_genomes_project 6 101642656 101651004 + MGP_NODShiLtJ_P0078483 Vmn1r51 protein_coding protein_coding MGP_NODShiLtJ_T0078484.1 MGP_NODShiLtJ_G0030837.1 mouse_genomes_project 6 101648437 101651004 + MGP_NODShiLtJ_P0078484 Vmn1r51 protein_coding protein_coding MGP_NODShiLtJ_T0008452.1 MGP_NODShiLtJ_G0006836.1 mouse_genomes_project 6 32176415 32185079 + Smkr-ps lincRNA lincRNA MGP_NODShiLtJ_T0008453.1 MGP_NODShiLtJ_G0006836.1 mouse_genomes_project 6 32176417 32185332 + Smkr-ps lincRNA lincRNA MGP_NODShiLtJ_T0075920.1 MGP_NODShiLtJ_G0030256.1 mouse_genomes_project 6 5551059 5554422 - MGP_NODShiLtJ_P0075920 Rpa3 protein_coding protein_coding MGP_NODShiLtJ_T0075921.1 MGP_NODShiLtJ_G0030256.1 mouse_genomes_project 6 5552472 5554389 - Rpa3 protein_coding retained_intron MGP_NODShiLtJ_T0011552.1 MGP_NODShiLtJ_G0009685.1 mouse_genomes_project 6 111888089 111888336 + Gm24936 misc_RNA misc_RNA MGP_NODShiLtJ_T0075913.1 MGP_NODShiLtJ_G0030253.1 mouse_genomes_project 6 5106948 5139293 + MGP_NODShiLtJ_P0075913 C1galt1 protein_coding protein_coding MGP_NODShiLtJ_T0015482.1 MGP_NODShiLtJ_G0013590.1 mouse_genomes_project 6 144805305 144805795 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079710.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140596106 140610572 - MGP_NODShiLtJ_P0079710 Usp5 protein_coding protein_coding MGP_NODShiLtJ_T0079711.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140596125 140610523 - MGP_NODShiLtJ_P0079711 Usp5 protein_coding protein_coding MGP_NODShiLtJ_T0079712.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140596507 140599725 - Usp5 protein_coding retained_intron MGP_NODShiLtJ_T0079713.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140598333 140598981 - Usp5 protein_coding retained_intron MGP_NODShiLtJ_T0079714.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140602862 140604557 - Usp5 protein_coding retained_intron MGP_NODShiLtJ_T0079715.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140603706 140610496 - MGP_NODShiLtJ_P0079715 Usp5 protein_coding protein_coding MGP_NODShiLtJ_T0079716.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140603814 140604711 - Usp5 protein_coding retained_intron MGP_NODShiLtJ_T0079717.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140603930 140605288 - Usp5 protein_coding retained_intron MGP_NODShiLtJ_T0079718.1 MGP_NODShiLtJ_G0031076.1 mouse_genomes_project 6 140605223 140609983 - MGP_NODShiLtJ_P0079718 Usp5 protein_coding protein_coding MGP_NODShiLtJ_T0001879.1 MGP_NODShiLtJ_G0001791.1 mouse_genomes_project 6 5115977 5117849 + TEC TEC MGP_NODShiLtJ_T0010658.1 MGP_NODShiLtJ_G0008791.1 mouse_genomes_project 6 41569282 41569351 + Mir7670 miRNA miRNA MGP_NODShiLtJ_T0077547.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75002599 75124347 + MGP_NODShiLtJ_P0077547 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0077548.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75002625 75120917 + MGP_NODShiLtJ_P0077548 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0077549.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75002633 75121268 + MGP_NODShiLtJ_P0077549 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0077550.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75002636 75121284 + MGP_NODShiLtJ_P0077550 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0077551.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75002639 75120889 + MGP_NODShiLtJ_P0077551 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0077552.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75002642 75122081 + MGP_NODShiLtJ_P0077552 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0077553.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75002658 75120836 + MGP_NODShiLtJ_P0077553 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0077554.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75002751 75121134 + MGP_NODShiLtJ_P0077554 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0077555.1 MGP_NODShiLtJ_G0030650.1 mouse_genomes_project 6 75003093 75120555 + MGP_NODShiLtJ_P0077555 Gng12 protein_coding protein_coding MGP_NODShiLtJ_T0078490.1 MGP_NODShiLtJ_G0030842.1 mouse_genomes_project 6 101904876 101937773 + MGP_NODShiLtJ_P0078490 Uroc1 protein_coding protein_coding MGP_NODShiLtJ_T0078491.1 MGP_NODShiLtJ_G0030842.1 mouse_genomes_project 6 101904881 101937768 + MGP_NODShiLtJ_P0078491 Uroc1 protein_coding protein_coding MGP_NODShiLtJ_T0002074.1 MGP_NODShiLtJ_G0001986.1 mouse_genomes_project 6 127498922 127501042 - TEC TEC MGP_NODShiLtJ_T0079578.1 MGP_NODShiLtJ_G0031044.1 mouse_genomes_project 6 138526482 138542668 + MGP_NODShiLtJ_P0079578 Clec4b1 protein_coding protein_coding MGP_NODShiLtJ_T0079579.1 MGP_NODShiLtJ_G0031044.1 mouse_genomes_project 6 138526518 138542679 + MGP_NODShiLtJ_P0079579 Clec4b1 protein_coding protein_coding MGP_NODShiLtJ_T0079995.1 MGP_NODShiLtJ_G0031130.1 mouse_genomes_project 6 144478093 144488230 + MGP_NODShiLtJ_P0079995 4933413G19Rik protein_coding protein_coding MGP_NODShiLtJ_T0079996.1 MGP_NODShiLtJ_G0031130.1 mouse_genomes_project 6 144478093 144488893 + MGP_NODShiLtJ_P0079996 4933413G19Rik protein_coding protein_coding MGP_NODShiLtJ_T0015204.1 MGP_NODShiLtJ_G0013312.1 mouse_genomes_project 6 51298216 51299207 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002113.1 MGP_NODShiLtJ_G0002025.1 mouse_genomes_project 6 151641259 151641955 - TEC TEC MGP_NODShiLtJ_T0080662.1 MGP_NODShiLtJ_G0031302.1 mouse_genomes_project 6 165473036 165533182 + MGP_NODShiLtJ_P0080662 Stk38l protein_coding protein_coding MGP_NODShiLtJ_T0080663.1 MGP_NODShiLtJ_G0031302.1 mouse_genomes_project 6 165473353 165509797 + MGP_NODShiLtJ_P0080663 Stk38l protein_coding protein_coding MGP_NODShiLtJ_T0080664.1 MGP_NODShiLtJ_G0031302.1 mouse_genomes_project 6 165509706 165533185 + MGP_NODShiLtJ_P0080664 Stk38l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0077072.1 MGP_NODShiLtJ_G0030515.1 mouse_genomes_project 6 53660460 53668328 + MGP_NODShiLtJ_P0077072 Gimap5 protein_coding protein_coding MGP_NODShiLtJ_T0077073.1 MGP_NODShiLtJ_G0030515.1 mouse_genomes_project 6 53660461 53661752 + Gimap5 protein_coding processed_transcript MGP_NODShiLtJ_T0077074.1 MGP_NODShiLtJ_G0030515.1 mouse_genomes_project 6 53660462 53661779 + Gimap5 protein_coding processed_transcript MGP_NODShiLtJ_T0077075.1 MGP_NODShiLtJ_G0030515.1 mouse_genomes_project 6 53660562 53662893 + Gimap5 protein_coding retained_intron MGP_NODShiLtJ_T0002028.1 MGP_NODShiLtJ_G0001940.1 mouse_genomes_project 6 100263763 100267055 - TEC TEC MGP_NODShiLtJ_T0015459.1 MGP_NODShiLtJ_G0013567.1 mouse_genomes_project 6 139439397 139440244 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078849.1 MGP_NODShiLtJ_G0030913.1 mouse_genomes_project 6 126761252 126791717 - MGP_NODShiLtJ_P0078849 Ssu2 protein_coding protein_coding MGP_NODShiLtJ_T0078850.1 MGP_NODShiLtJ_G0030913.1 mouse_genomes_project 6 126772150 126781115 - Ssu2 protein_coding processed_transcript MGP_NODShiLtJ_T0078851.1 MGP_NODShiLtJ_G0030913.1 mouse_genomes_project 6 126772685 126779127 - Ssu2 protein_coding retained_intron MGP_NODShiLtJ_T0078852.1 MGP_NODShiLtJ_G0030913.1 mouse_genomes_project 6 126773106 126791693 - MGP_NODShiLtJ_P0078852 Ssu2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080031.1 MGP_NODShiLtJ_G0031138.1 mouse_genomes_project 6 144822664 144836622 + MGP_NODShiLtJ_P0080031 Clec2h protein_coding protein_coding MGP_NODShiLtJ_T0080032.1 MGP_NODShiLtJ_G0031138.1 mouse_genomes_project 6 144822665 144834212 + MGP_NODShiLtJ_P0080032 Clec2h protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080033.1 MGP_NODShiLtJ_G0031138.1 mouse_genomes_project 6 144822666 144834005 + MGP_NODShiLtJ_P0080033 Clec2h protein_coding protein_coding MGP_NODShiLtJ_T0080034.1 MGP_NODShiLtJ_G0031138.1 mouse_genomes_project 6 144822670 144834205 + Clec2h protein_coding retained_intron MGP_NODShiLtJ_T0100650.1 MGP_NODShiLtJ_G0039044.1 mouse_genomes_project 6 5143156 5143285 + Gm22276 snoRNA snoRNA MGP_NODShiLtJ_T0015161.1 MGP_NODShiLtJ_G0013269.1 mouse_genomes_project 6 25549842 25550551 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078967.1 MGP_NODShiLtJ_G0030930.1 mouse_genomes_project 6 127908739 127918970 - MGP_NODShiLtJ_P0078967 Cidec protein_coding protein_coding MGP_NODShiLtJ_T0078968.1 MGP_NODShiLtJ_G0030930.1 mouse_genomes_project 6 127912700 127918849 - MGP_NODShiLtJ_P0078968 Cidec protein_coding protein_coding MGP_NODShiLtJ_T0100661.1 MGP_NODShiLtJ_G0039055.1 mouse_genomes_project 6 42158201 42158327 + Gm23010 snoRNA snoRNA MGP_NODShiLtJ_T0077865.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051347 94054523 - MGP_NODShiLtJ_P0077865 Htra2 protein_coding protein_coding MGP_NODShiLtJ_T0077866.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051347 94054652 - MGP_NODShiLtJ_P0077866 Htra2 protein_coding protein_coding MGP_NODShiLtJ_T0077867.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051347 94054652 - MGP_NODShiLtJ_P0077867 Htra2 protein_coding protein_coding MGP_NODShiLtJ_T0077868.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051361 94054652 - MGP_NODShiLtJ_P0077868 Htra2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077869.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051365 94055354 - Htra2 protein_coding retained_intron MGP_NODShiLtJ_T0077870.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051468 94053767 - MGP_NODShiLtJ_P0077870 Htra2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077871.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051558 94053918 - MGP_NODShiLtJ_P0077871 Htra2 protein_coding protein_coding MGP_NODShiLtJ_T0077872.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051567 94053918 - Htra2 protein_coding retained_intron MGP_NODShiLtJ_T0077873.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94051831 94054118 - MGP_NODShiLtJ_P0077873 Htra2 protein_coding protein_coding MGP_NODShiLtJ_T0077874.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94053118 94055246 - Htra2 protein_coding processed_transcript MGP_NODShiLtJ_T0077875.1 MGP_NODShiLtJ_G0030719.1 mouse_genomes_project 6 94053227 94053966 - Htra2 protein_coding processed_transcript MGP_NODShiLtJ_T0079660.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140494012 140513805 - MGP_NODShiLtJ_P0079660 Ptpn6 protein_coding protein_coding MGP_NODShiLtJ_T0079661.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140494012 140513716 - MGP_NODShiLtJ_P0079661 Ptpn6 protein_coding protein_coding MGP_NODShiLtJ_T0079662.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140494012 140508269 - MGP_NODShiLtJ_P0079662 Ptpn6 protein_coding protein_coding MGP_NODShiLtJ_T0079663.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140494025 140495148 - MGP_NODShiLtJ_P0079663 Ptpn6 protein_coding protein_coding MGP_NODShiLtJ_T0079664.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140494413 140513675 - MGP_NODShiLtJ_P0079664 Ptpn6 protein_coding protein_coding MGP_NODShiLtJ_T0079665.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140500508 140502576 - MGP_NODShiLtJ_P0079665 Ptpn6 protein_coding protein_coding MGP_NODShiLtJ_T0079666.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140500556 140502526 - MGP_NODShiLtJ_P0079666 Ptpn6 protein_coding protein_coding MGP_NODShiLtJ_T0079667.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140502861 140503823 - Ptpn6 protein_coding retained_intron MGP_NODShiLtJ_T0079668.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140504015 140507886 - Ptpn6 protein_coding processed_transcript MGP_NODShiLtJ_T0079669.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140507476 140508197 - MGP_NODShiLtJ_P0079669 Ptpn6 protein_coding protein_coding MGP_NODShiLtJ_T0079670.1 MGP_NODShiLtJ_G0031068.1 mouse_genomes_project 6 140507769 140508225 - Ptpn6 protein_coding retained_intron MGP_NODShiLtJ_T0079675.1 MGP_NODShiLtJ_G0031070.1 mouse_genomes_project 6 140514279 140531107 - MGP_NODShiLtJ_P0079675 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002083.1 MGP_NODShiLtJ_G0001995.1 mouse_genomes_project 6 131048014 131048959 + TEC TEC MGP_NODShiLtJ_T0015248.1 MGP_NODShiLtJ_G0013356.1 mouse_genomes_project 6 64507351 64507612 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004921.1 MGP_NODShiLtJ_G0004218.1 mouse_genomes_project 6 81559725 81566938 + Gm15401 antisense antisense MGP_NODShiLtJ_T0004922.1 MGP_NODShiLtJ_G0004218.1 mouse_genomes_project 6 81560272 81567821 + Gm15401 antisense antisense MGP_NODShiLtJ_T0004923.1 MGP_NODShiLtJ_G0004218.1 mouse_genomes_project 6 81566707 81568172 + Gm15401 antisense antisense MGP_NODShiLtJ_T0015165.1 MGP_NODShiLtJ_G0013273.1 mouse_genomes_project 6 28451810 28452552 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078622.1 MGP_NODShiLtJ_G0030866.1 mouse_genomes_project 6 104049548 104403762 - MGP_NODShiLtJ_P0078622 Prickle2 protein_coding protein_coding MGP_NODShiLtJ_T0078623.1 MGP_NODShiLtJ_G0030866.1 mouse_genomes_project 6 104049548 104253559 - MGP_NODShiLtJ_P0078623 Prickle2 protein_coding protein_coding MGP_NODShiLtJ_T0078624.1 MGP_NODShiLtJ_G0030866.1 mouse_genomes_project 6 104049550 104218892 - MGP_NODShiLtJ_P0078624 Prickle2 protein_coding protein_coding MGP_NODShiLtJ_T0078625.1 MGP_NODShiLtJ_G0030866.1 mouse_genomes_project 6 104054022 104162911 - MGP_NODShiLtJ_P0078625 Prickle2 protein_coding protein_coding MGP_NODShiLtJ_T0077443.1 MGP_NODShiLtJ_G0030622.1 mouse_genomes_project 6 64421753 64422806 - MGP_NODShiLtJ_P0077443 Vmn1r30 protein_coding protein_coding MGP_NODShiLtJ_T0079241.1 MGP_NODShiLtJ_G0030981.1 mouse_genomes_project 6 131371491 131373708 + MGP_NODShiLtJ_P0079241 8430408G22Rik protein_coding protein_coding MGP_NODShiLtJ_T0079242.1 MGP_NODShiLtJ_G0030981.1 mouse_genomes_project 6 131371510 131373708 + MGP_NODShiLtJ_P0079242 8430408G22Rik protein_coding protein_coding MGP_NODShiLtJ_T0079243.1 MGP_NODShiLtJ_G0030981.1 mouse_genomes_project 6 131371578 131372793 + MGP_NODShiLtJ_P0079243 8430408G22Rik protein_coding protein_coding MGP_NODShiLtJ_T0015288.1 MGP_NODShiLtJ_G0013396.1 mouse_genomes_project 6 74798580 74799037 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101361.1 MGP_NODShiLtJ_G0039586.1 mouse_genomes_project 6 70353144 70356020 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101362.1 MGP_NODShiLtJ_G0039586.1 mouse_genomes_project 6 70353494 70354930 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0011724.1 MGP_NODShiLtJ_G0009834.1 mouse_genomes_project 6 46388353 46389289 + MGP_NODShiLtJ_P0011724 Olfr451-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0078269.1 MGP_NODShiLtJ_G0030791.1 mouse_genomes_project 6 98428119 98480678 + MGP_NODShiLtJ_P0078269 Gfpt1 protein_coding protein_coding MGP_NODShiLtJ_T0078270.1 MGP_NODShiLtJ_G0030791.1 mouse_genomes_project 6 98428119 98443158 + MGP_NODShiLtJ_P0078270 Gfpt1 protein_coding protein_coding MGP_NODShiLtJ_T0078271.1 MGP_NODShiLtJ_G0030791.1 mouse_genomes_project 6 98428123 98441682 + Gfpt1 protein_coding processed_transcript MGP_NODShiLtJ_T0078272.1 MGP_NODShiLtJ_G0030791.1 mouse_genomes_project 6 98428123 98430932 + Gfpt1 protein_coding retained_intron MGP_NODShiLtJ_T0078273.1 MGP_NODShiLtJ_G0030791.1 mouse_genomes_project 6 98428123 98443158 + MGP_NODShiLtJ_P0078273 Gfpt1 protein_coding protein_coding MGP_NODShiLtJ_T0078274.1 MGP_NODShiLtJ_G0030791.1 mouse_genomes_project 6 98428164 98476725 + MGP_NODShiLtJ_P0078274 Gfpt1 protein_coding protein_coding MGP_NODShiLtJ_T0078275.1 MGP_NODShiLtJ_G0030791.1 mouse_genomes_project 6 98465288 98474839 + Gfpt1 protein_coding retained_intron MGP_NODShiLtJ_T0004877.1 MGP_NODShiLtJ_G0004184.1 mouse_genomes_project 6 42210955 42214676 - 1700025N23Rik antisense antisense MGP_NODShiLtJ_T0015242.1 MGP_NODShiLtJ_G0013350.1 mouse_genomes_project 6 63801328 63801766 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076033.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16675317 16714397 + MGP_NODShiLtJ_P0076033 Cav1 protein_coding protein_coding MGP_NODShiLtJ_T0076034.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16675327 16713502 + MGP_NODShiLtJ_P0076034 Cav1 protein_coding protein_coding MGP_NODShiLtJ_T0076035.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16675392 16712369 + MGP_NODShiLtJ_P0076035 Cav1 protein_coding protein_coding MGP_NODShiLtJ_T0076036.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16675393 16699953 + Cav1 protein_coding processed_transcript MGP_NODShiLtJ_T0076037.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16675393 16712424 + MGP_NODShiLtJ_P0076037 Cav1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076038.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16675405 16677154 + MGP_NODShiLtJ_P0076038 Cav1 protein_coding protein_coding MGP_NODShiLtJ_T0076039.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16675998 16712226 + MGP_NODShiLtJ_P0076039 Cav1 protein_coding protein_coding MGP_NODShiLtJ_T0076040.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16676228 16712592 + MGP_NODShiLtJ_P0076040 Cav1 protein_coding protein_coding MGP_NODShiLtJ_T0076041.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16676590 16714525 + MGP_NODShiLtJ_P0076041 Cav1 protein_coding protein_coding MGP_NODShiLtJ_T0076042.1 MGP_NODShiLtJ_G0030277.1 mouse_genomes_project 6 16676673 16699944 + Cav1 protein_coding processed_transcript MGP_NODShiLtJ_T0015269.1 MGP_NODShiLtJ_G0013377.1 mouse_genomes_project 6 73056068 73056297 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080659.1 MGP_NODShiLtJ_G0031301.1 mouse_genomes_project 6 165399633 165407473 + MGP_NODShiLtJ_P0080659 Med21 protein_coding protein_coding MGP_NODShiLtJ_T0080660.1 MGP_NODShiLtJ_G0031301.1 mouse_genomes_project 6 165399665 165401064 + Med21 protein_coding retained_intron MGP_NODShiLtJ_T0080661.1 MGP_NODShiLtJ_G0031301.1 mouse_genomes_project 6 165404290 165407473 + Med21 protein_coding retained_intron MGP_NODShiLtJ_T0004883.1 MGP_NODShiLtJ_G0004189.1 mouse_genomes_project 6 43445955 43451869 - Gm26807 antisense antisense MGP_NODShiLtJ_T0015125.1 MGP_NODShiLtJ_G0013233.1 mouse_genomes_project 6 5951731 5952978 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002036.1 MGP_NODShiLtJ_G0001948.1 mouse_genomes_project 6 102817421 102820250 - TEC TEC MGP_NODShiLtJ_T0015417.1 MGP_NODShiLtJ_G0013525.1 mouse_genomes_project 6 127439764 127440239 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078567.1 MGP_NODShiLtJ_G0030856.1 mouse_genomes_project 6 103140331 103147025 + MGP_NODShiLtJ_P0078567 Lsm3 protein_coding protein_coding MGP_NODShiLtJ_T0078568.1 MGP_NODShiLtJ_G0030856.1 mouse_genomes_project 6 103140360 103144233 + Lsm3 protein_coding retained_intron MGP_NODShiLtJ_T0078569.1 MGP_NODShiLtJ_G0030856.1 mouse_genomes_project 6 103140380 103142410 + Lsm3 protein_coding retained_intron MGP_NODShiLtJ_T0078570.1 MGP_NODShiLtJ_G0030856.1 mouse_genomes_project 6 103140450 103141921 + Lsm3 protein_coding retained_intron MGP_NODShiLtJ_T0078571.1 MGP_NODShiLtJ_G0030856.1 mouse_genomes_project 6 103140451 103147020 + MGP_NODShiLtJ_P0078571 Lsm3 protein_coding protein_coding MGP_NODShiLtJ_T0077968.1 MGP_NODShiLtJ_G0030737.1 mouse_genomes_project 6 94356834 94365294 + Mob1a protein_coding processed_transcript MGP_NODShiLtJ_T0077969.1 MGP_NODShiLtJ_G0030737.1 mouse_genomes_project 6 94356852 94363249 + MGP_NODShiLtJ_P0077969 Mob1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077970.1 MGP_NODShiLtJ_G0030737.1 mouse_genomes_project 6 94356896 94375657 + MGP_NODShiLtJ_P0077970 Mob1a protein_coding protein_coding MGP_NODShiLtJ_T0077971.1 MGP_NODShiLtJ_G0030737.1 mouse_genomes_project 6 94357070 94375582 + MGP_NODShiLtJ_P0077971 Mob1a protein_coding protein_coding MGP_NODShiLtJ_T0004948.1 MGP_NODShiLtJ_G0004233.1 mouse_genomes_project 6 97259687 97305689 + Gm19265 antisense antisense MGP_NODShiLtJ_T0099462.1 MGP_NODShiLtJ_G0037856.1 mouse_genomes_project 6 145519090 145519153 + Gm26160 snRNA snRNA MGP_NODShiLtJ_T0077905.1 MGP_NODShiLtJ_G0030724.1 mouse_genomes_project 6 94090438 94093625 + MGP_NODShiLtJ_P0077905 Lbx2 protein_coding protein_coding MGP_NODShiLtJ_T0077906.1 MGP_NODShiLtJ_G0030724.1 mouse_genomes_project 6 94092719 94093478 + Lbx2 protein_coding processed_transcript MGP_NODShiLtJ_T0004970.1 MGP_NODShiLtJ_G0004244.1 mouse_genomes_project 6 99916004 99916831 + Gm44264 antisense antisense MGP_NODShiLtJ_T0079260.1 MGP_NODShiLtJ_G0030985.1 mouse_genomes_project 6 132680196 132690315 + Zfp239 protein_coding processed_transcript MGP_NODShiLtJ_T0079261.1 MGP_NODShiLtJ_G0030985.1 mouse_genomes_project 6 132681173 132690276 + Zfp239 protein_coding processed_transcript MGP_NODShiLtJ_T0079262.1 MGP_NODShiLtJ_G0030985.1 mouse_genomes_project 6 132681173 132692828 + MGP_NODShiLtJ_P0079262 Zfp239 protein_coding protein_coding MGP_NODShiLtJ_T0079263.1 MGP_NODShiLtJ_G0030985.1 mouse_genomes_project 6 132681173 132692302 + MGP_NODShiLtJ_P0079263 Zfp239 protein_coding protein_coding MGP_NODShiLtJ_T0079264.1 MGP_NODShiLtJ_G0030985.1 mouse_genomes_project 6 132681180 132688452 + Zfp239 protein_coding retained_intron MGP_NODShiLtJ_T0079265.1 MGP_NODShiLtJ_G0030985.1 mouse_genomes_project 6 132681180 132690271 + Zfp239 protein_coding processed_transcript MGP_NODShiLtJ_T0079266.1 MGP_NODShiLtJ_G0030985.1 mouse_genomes_project 6 132681180 132690004 + Zfp239 protein_coding processed_transcript MGP_NODShiLtJ_T0099465.1 MGP_NODShiLtJ_G0037859.1 mouse_genomes_project 6 153832627 153832817 + Gm26105 snRNA snRNA MGP_NODShiLtJ_T0015265.1 MGP_NODShiLtJ_G0013373.1 mouse_genomes_project 6 72750141 72750811 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100712.1 MGP_NODShiLtJ_G0039106.1 mouse_genomes_project 6 139656997 139657073 - Gm24843 snoRNA snoRNA MGP_NODShiLtJ_T0076248.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31312944 31328819 - MGP_NODShiLtJ_P0076248 Impdh1 protein_coding protein_coding MGP_NODShiLtJ_T0076249.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31312947 31324785 - MGP_NODShiLtJ_P0076249 Impdh1 protein_coding protein_coding MGP_NODShiLtJ_T0076250.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31312947 31328852 - MGP_NODShiLtJ_P0076250 Impdh1 protein_coding protein_coding MGP_NODShiLtJ_T0076251.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31312947 31324737 - MGP_NODShiLtJ_P0076251 Impdh1 protein_coding protein_coding MGP_NODShiLtJ_T0076252.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31312948 31328830 - MGP_NODShiLtJ_P0076252 Impdh1 protein_coding protein_coding MGP_NODShiLtJ_T0076253.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31312955 31315929 - MGP_NODShiLtJ_P0076253 Impdh1 protein_coding protein_coding MGP_NODShiLtJ_T0076254.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31317070 31318947 - Impdh1 protein_coding retained_intron MGP_NODShiLtJ_T0076255.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31317615 31328765 - MGP_NODShiLtJ_P0076255 Impdh1 protein_coding protein_coding MGP_NODShiLtJ_T0076256.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31319338 31322122 - Impdh1 protein_coding retained_intron MGP_NODShiLtJ_T0076257.1 MGP_NODShiLtJ_G0030324.1 mouse_genomes_project 6 31319504 31328417 - MGP_NODShiLtJ_P0076257 Impdh1 protein_coding protein_coding MGP_NODShiLtJ_T0079502.1 MGP_NODShiLtJ_G0031024.1 mouse_genomes_project 6 136791056 136794953 + MGP_NODShiLtJ_P0079502 A2m protein_coding protein_coding MGP_NODShiLtJ_T0079503.1 MGP_NODShiLtJ_G0031024.1 mouse_genomes_project 6 136791908 136840453 + MGP_NODShiLtJ_P0079503 A2m protein_coding protein_coding MGP_NODShiLtJ_T0079504.1 MGP_NODShiLtJ_G0031024.1 mouse_genomes_project 6 136815990 136818569 + A2m protein_coding retained_intron MGP_NODShiLtJ_T0000318.1 MGP_NODShiLtJ_G0000256.1 mouse_genomes_project 6 79008092 79008661 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0078395.1 MGP_NODShiLtJ_G0030818.1 mouse_genomes_project 6 100203551 100205124 + Mgll protein_coding processed_transcript MGP_NODShiLtJ_T0078396.1 MGP_NODShiLtJ_G0030818.1 mouse_genomes_project 6 100203562 100303710 + MGP_NODShiLtJ_P0078396 Mgll protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078397.1 MGP_NODShiLtJ_G0030818.1 mouse_genomes_project 6 100203575 100306315 + MGP_NODShiLtJ_P0078397 Mgll protein_coding protein_coding MGP_NODShiLtJ_T0078398.1 MGP_NODShiLtJ_G0030818.1 mouse_genomes_project 6 100203677 100246120 + MGP_NODShiLtJ_P0078398 Mgll protein_coding protein_coding MGP_NODShiLtJ_T0078399.1 MGP_NODShiLtJ_G0030818.1 mouse_genomes_project 6 100204158 100306199 + MGP_NODShiLtJ_P0078399 Mgll protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078400.1 MGP_NODShiLtJ_G0030818.1 mouse_genomes_project 6 100204232 100308686 + MGP_NODShiLtJ_P0078400 Mgll protein_coding protein_coding MGP_NODShiLtJ_T0078401.1 MGP_NODShiLtJ_G0030818.1 mouse_genomes_project 6 100303456 100306158 + Mgll protein_coding retained_intron MGP_NODShiLtJ_T0099433.1 MGP_NODShiLtJ_G0037827.1 mouse_genomes_project 6 73966058 73966158 - Gm23625 snRNA snRNA MGP_NODShiLtJ_T0079055.1 MGP_NODShiLtJ_G0030948.1 mouse_genomes_project 6 128922710 129008854 + MGP_NODShiLtJ_P0079055 Hrh1 protein_coding protein_coding MGP_NODShiLtJ_T0079056.1 MGP_NODShiLtJ_G0030948.1 mouse_genomes_project 6 128922860 129005422 + MGP_NODShiLtJ_P0079056 Hrh1 protein_coding protein_coding MGP_NODShiLtJ_T0079057.1 MGP_NODShiLtJ_G0030948.1 mouse_genomes_project 6 128928440 129008026 + MGP_NODShiLtJ_P0079057 Hrh1 protein_coding protein_coding MGP_NODShiLtJ_T0079058.1 MGP_NODShiLtJ_G0030948.1 mouse_genomes_project 6 128928596 129007960 + MGP_NODShiLtJ_P0079058 Hrh1 protein_coding protein_coding MGP_NODShiLtJ_T0079059.1 MGP_NODShiLtJ_G0030948.1 mouse_genomes_project 6 128984334 129008024 + MGP_NODShiLtJ_P0079059 Hrh1 protein_coding protein_coding MGP_NODShiLtJ_T0078355.1 MGP_NODShiLtJ_G0030811.1 mouse_genomes_project 6 99540800 99562705 + MGP_NODShiLtJ_P0078355 Rpn1 protein_coding protein_coding MGP_NODShiLtJ_T0078356.1 MGP_NODShiLtJ_G0030811.1 mouse_genomes_project 6 99540881 99553060 + MGP_NODShiLtJ_P0078356 Rpn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078357.1 MGP_NODShiLtJ_G0030811.1 mouse_genomes_project 6 99551314 99558506 + Rpn1 protein_coding retained_intron MGP_NODShiLtJ_T0078358.1 MGP_NODShiLtJ_G0030811.1 mouse_genomes_project 6 99556687 99558763 + Rpn1 protein_coding retained_intron MGP_NODShiLtJ_T0078359.1 MGP_NODShiLtJ_G0030811.1 mouse_genomes_project 6 99558971 99560788 + Rpn1 protein_coding retained_intron MGP_NODShiLtJ_T0015526.1 MGP_NODShiLtJ_G0013634.1 mouse_genomes_project 6 159055872 159056078 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080674.1 MGP_NODShiLtJ_G0031304.1 mouse_genomes_project 6 165603200 165629996 + MGP_NODShiLtJ_P0080674 Smco2 protein_coding protein_coding MGP_NODShiLtJ_T0080675.1 MGP_NODShiLtJ_G0031304.1 mouse_genomes_project 6 165603253 165610059 + Smco2 protein_coding retained_intron MGP_NODShiLtJ_T0080676.1 MGP_NODShiLtJ_G0031304.1 mouse_genomes_project 6 165610744 165617749 + Smco2 protein_coding processed_transcript MGP_NODShiLtJ_T0080677.1 MGP_NODShiLtJ_G0031304.1 mouse_genomes_project 6 165615519 165624323 + Smco2 protein_coding processed_transcript MGP_NODShiLtJ_T0010710.1 MGP_NODShiLtJ_G0008843.1 mouse_genomes_project 6 146129799 146129908 + Mir680-1 miRNA miRNA MGP_NODShiLtJ_T0080608.1 MGP_NODShiLtJ_G0031292.1 mouse_genomes_project 6 164065071 164332614 - MGP_NODShiLtJ_P0080608 Lmntd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080609.1 MGP_NODShiLtJ_G0031292.1 mouse_genomes_project 6 164093773 164153902 - MGP_NODShiLtJ_P0080609 Lmntd1 protein_coding protein_coding MGP_NODShiLtJ_T0080610.1 MGP_NODShiLtJ_G0031292.1 mouse_genomes_project 6 164094533 164139720 - MGP_NODShiLtJ_P0080610 Lmntd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080611.1 MGP_NODShiLtJ_G0031292.1 mouse_genomes_project 6 164097538 164137636 - MGP_NODShiLtJ_P0080611 Lmntd1 protein_coding protein_coding MGP_NODShiLtJ_T0080612.1 MGP_NODShiLtJ_G0031292.1 mouse_genomes_project 6 164132685 164136792 - MGP_NODShiLtJ_P0080612 Lmntd1 protein_coding protein_coding MGP_NODShiLtJ_T0080613.1 MGP_NODShiLtJ_G0031292.1 mouse_genomes_project 6 164257086 164332660 - Lmntd1 protein_coding processed_transcript MGP_NODShiLtJ_T0080614.1 MGP_NODShiLtJ_G0031292.1 mouse_genomes_project 6 164297067 164332310 - Lmntd1 protein_coding processed_transcript MGP_NODShiLtJ_T0076106.1 MGP_NODShiLtJ_G0030288.1 mouse_genomes_project 6 22303133 22396683 - MGP_NODShiLtJ_P0076106 Tspan12 protein_coding protein_coding MGP_NODShiLtJ_T0076107.1 MGP_NODShiLtJ_G0030288.1 mouse_genomes_project 6 22303133 22397113 - MGP_NODShiLtJ_P0076107 Tspan12 protein_coding protein_coding MGP_NODShiLtJ_T0076108.1 MGP_NODShiLtJ_G0030288.1 mouse_genomes_project 6 22327874 22396576 - MGP_NODShiLtJ_P0076108 Tspan12 protein_coding protein_coding MGP_NODShiLtJ_T0076109.1 MGP_NODShiLtJ_G0030288.1 mouse_genomes_project 6 22333319 22396509 - MGP_NODShiLtJ_P0076109 Tspan12 protein_coding protein_coding MGP_NODShiLtJ_T0076110.1 MGP_NODShiLtJ_G0030288.1 mouse_genomes_project 6 22380794 22396764 - MGP_NODShiLtJ_P0076110 Tspan12 protein_coding protein_coding MGP_NODShiLtJ_T0076111.1 MGP_NODShiLtJ_G0030288.1 mouse_genomes_project 6 22395599 22396423 - MGP_NODShiLtJ_P0076111 Tspan12 protein_coding protein_coding MGP_NODShiLtJ_T0078307.1 MGP_NODShiLtJ_G0030802.1 mouse_genomes_project 6 99207364 99209061 + MGP_NODShiLtJ_P0078307 Gp9 protein_coding protein_coding MGP_NODShiLtJ_T0015188.1 MGP_NODShiLtJ_G0013296.1 mouse_genomes_project 6 44346518 44346706 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078590.1 MGP_NODShiLtJ_G0030859.1 mouse_genomes_project 6 103535927 103542841 + Ccdc174 protein_coding retained_intron MGP_NODShiLtJ_T0078591.1 MGP_NODShiLtJ_G0030859.1 mouse_genomes_project 6 103535927 103559417 + MGP_NODShiLtJ_P0078591 Ccdc174 protein_coding protein_coding MGP_NODShiLtJ_T0078592.1 MGP_NODShiLtJ_G0030859.1 mouse_genomes_project 6 103535927 103559417 + MGP_NODShiLtJ_P0078592 Ccdc174 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078593.1 MGP_NODShiLtJ_G0030859.1 mouse_genomes_project 6 103535946 103538392 + Ccdc174 protein_coding retained_intron MGP_NODShiLtJ_T0078594.1 MGP_NODShiLtJ_G0030859.1 mouse_genomes_project 6 103535949 103546168 + Ccdc174 protein_coding retained_intron MGP_NODShiLtJ_T0078595.1 MGP_NODShiLtJ_G0030859.1 mouse_genomes_project 6 103551920 103554867 + Ccdc174 protein_coding retained_intron MGP_NODShiLtJ_T0078596.1 MGP_NODShiLtJ_G0030859.1 mouse_genomes_project 6 103552377 103554913 + Ccdc174 protein_coding retained_intron MGP_NODShiLtJ_T0015311.1 MGP_NODShiLtJ_G0013419.1 mouse_genomes_project 6 80506300 80506874 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078414.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100322869 100324032 - Podxl2 protein_coding processed_transcript MGP_NODShiLtJ_T0078415.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100323078 100357204 - MGP_NODShiLtJ_P0078415 Podxl2 protein_coding protein_coding MGP_NODShiLtJ_T0078416.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100323849 100326230 - Podxl2 protein_coding retained_intron MGP_NODShiLtJ_T0078417.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100324487 100329681 - Podxl2 protein_coding processed_transcript MGP_NODShiLtJ_T0078418.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100327271 100329147 - Podxl2 protein_coding retained_intron MGP_NODShiLtJ_T0078419.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100329982 100356963 - MGP_NODShiLtJ_P0078419 Podxl2 protein_coding protein_coding MGP_NODShiLtJ_T0078420.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100329982 100357021 - MGP_NODShiLtJ_P0078420 Podxl2 protein_coding protein_coding MGP_NODShiLtJ_T0078421.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100330117 100346481 - Podxl2 protein_coding processed_transcript MGP_NODShiLtJ_T0078422.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100345490 100357214 - Podxl2 protein_coding retained_intron MGP_NODShiLtJ_T0078423.1 MGP_NODShiLtJ_G0030820.1 mouse_genomes_project 6 100346025 100356602 - Podxl2 protein_coding retained_intron MGP_NODShiLtJ_T0005047.1 MGP_NODShiLtJ_G0004303.1 mouse_genomes_project 6 152179211 152180128 + Gm44025 antisense antisense MGP_NODShiLtJ_T0102007.1 MGP_NODShiLtJ_G0040175.1 mouse_genomes_project 6 64491881 64492781 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0018128.1 MGP_NODShiLtJ_G0015504.1 mouse_genomes_project 6 75140996 75189662 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0018129.1 MGP_NODShiLtJ_G0015504.1 mouse_genomes_project 6 75141002 75171534 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0018130.1 MGP_NODShiLtJ_G0015504.1 mouse_genomes_project 6 75141052 75189147 + E230016M11Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018131.1 MGP_NODShiLtJ_G0015504.1 mouse_genomes_project 6 75184465 75189109 + E230016M11Rik processed_transcript retained_intron MGP_NODShiLtJ_T0100725.1 MGP_NODShiLtJ_G0039119.1 mouse_genomes_project 6 164168812 164168927 + Gm25373 snoRNA snoRNA MGP_NODShiLtJ_T0015338.1 MGP_NODShiLtJ_G0013446.1 mouse_genomes_project 6 94856536 94856914 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002122.1 MGP_NODShiLtJ_G0002034.1 mouse_genomes_project 6 157752299 157753581 - TEC TEC MGP_NODShiLtJ_T0010677.1 MGP_NODShiLtJ_G0008810.1 mouse_genomes_project 6 97922056 97922118 - Gm22184 miRNA miRNA MGP_NODShiLtJ_T0101381.1 MGP_NODShiLtJ_G0039597.1 mouse_genomes_project 6 151045038 151153861 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101382.1 MGP_NODShiLtJ_G0039597.1 mouse_genomes_project 6 151045038 151153860 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101383.1 MGP_NODShiLtJ_G0039597.1 mouse_genomes_project 6 151151784 151153860 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0077961.1 MGP_NODShiLtJ_G0030736.1 mouse_genomes_project 6 94336868 94348739 - MGP_NODShiLtJ_P0077961 Mthfd2 protein_coding protein_coding MGP_NODShiLtJ_T0077962.1 MGP_NODShiLtJ_G0030736.1 mouse_genomes_project 6 94337579 94348686 - MGP_NODShiLtJ_P0077962 Mthfd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077963.1 MGP_NODShiLtJ_G0030736.1 mouse_genomes_project 6 94337735 94340465 - Mthfd2 protein_coding retained_intron MGP_NODShiLtJ_T0077964.1 MGP_NODShiLtJ_G0030736.1 mouse_genomes_project 6 94340491 94341706 - Mthfd2 protein_coding retained_intron MGP_NODShiLtJ_T0077965.1 MGP_NODShiLtJ_G0030736.1 mouse_genomes_project 6 94340709 94342751 - Mthfd2 protein_coding retained_intron MGP_NODShiLtJ_T0077966.1 MGP_NODShiLtJ_G0030736.1 mouse_genomes_project 6 94342502 94343555 - Mthfd2 protein_coding retained_intron MGP_NODShiLtJ_T0077967.1 MGP_NODShiLtJ_G0030736.1 mouse_genomes_project 6 94343020 94356725 - MGP_NODShiLtJ_P0077967 Mthfd2 protein_coding protein_coding MGP_NODShiLtJ_T0015235.1 MGP_NODShiLtJ_G0013343.1 mouse_genomes_project 6 57988916 57989217 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004894.1 MGP_NODShiLtJ_G0004198.1 mouse_genomes_project 6 57360827 57362454 + Hotairm1 antisense antisense MGP_NODShiLtJ_T0004895.1 MGP_NODShiLtJ_G0004198.1 mouse_genomes_project 6 57362357 57366852 + Hotairm1 antisense antisense MGP_NODShiLtJ_T0004896.1 MGP_NODShiLtJ_G0004198.1 mouse_genomes_project 6 57362449 57366753 + Hotairm1 antisense antisense MGP_NODShiLtJ_T0008429.1 MGP_NODShiLtJ_G0006819.1 mouse_genomes_project 6 4143514 4148379 - Gm26774 lincRNA lincRNA MGP_NODShiLtJ_T0102023.1 MGP_NODShiLtJ_G0040191.1 mouse_genomes_project 6 131346157 131346870 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100711.1 MGP_NODShiLtJ_G0039105.1 mouse_genomes_project 6 139511204 139511311 + Gm22763 snoRNA snoRNA MGP_NODShiLtJ_T0099411.1 MGP_NODShiLtJ_G0037805.1 mouse_genomes_project 6 4112900 4113062 - Gm22155 snRNA snRNA MGP_NODShiLtJ_T0076514.1 MGP_NODShiLtJ_G0030366.1 mouse_genomes_project 6 36905723 36919459 + MGP_NODShiLtJ_P0076514 Akr1b10 protein_coding protein_coding MGP_NODShiLtJ_T0076515.1 MGP_NODShiLtJ_G0030366.1 mouse_genomes_project 6 36905754 36912113 + Akr1b10 protein_coding retained_intron MGP_NODShiLtJ_T0076516.1 MGP_NODShiLtJ_G0030366.1 mouse_genomes_project 6 36905786 36919257 + MGP_NODShiLtJ_P0076516 Akr1b10 protein_coding protein_coding MGP_NODShiLtJ_T0076517.1 MGP_NODShiLtJ_G0030366.1 mouse_genomes_project 6 36905786 36919456 + MGP_NODShiLtJ_P0076517 Akr1b10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076518.1 MGP_NODShiLtJ_G0030366.1 mouse_genomes_project 6 36912132 36913101 + Akr1b10 protein_coding retained_intron MGP_NODShiLtJ_T0076519.1 MGP_NODShiLtJ_G0030366.1 mouse_genomes_project 6 36913964 36915489 + Akr1b10 protein_coding retained_intron MGP_NODShiLtJ_T0077134.1 MGP_NODShiLtJ_G0030530.1 mouse_genomes_project 6 54849510 54856436 + MGP_NODShiLtJ_P0077134 Npy protein_coding protein_coding MGP_NODShiLtJ_T0004912.1 MGP_NODShiLtJ_G0004210.1 mouse_genomes_project 6 70745798 70749804 - Gm44071 antisense antisense MGP_NODShiLtJ_T0001950.1 MGP_NODShiLtJ_G0001862.1 mouse_genomes_project 6 62461789 62462461 - TEC TEC MGP_NODShiLtJ_T0008581.1 MGP_NODShiLtJ_G0006929.1 mouse_genomes_project 6 98047023 98047628 - Gm44214 lincRNA lincRNA MGP_NODShiLtJ_T0004869.1 MGP_NODShiLtJ_G0004177.1 mouse_genomes_project 6 35423331 35428086 + Gm14540 antisense antisense MGP_NODShiLtJ_T0005068.1 MGP_NODShiLtJ_G0004321.1 mouse_genomes_project 6 163721351 163726215 + Gm15687 antisense antisense MGP_NODShiLtJ_T0000316.1 MGP_NODShiLtJ_G0000254.1 mouse_genomes_project 6 78585271 78585553 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0008698.1 MGP_NODShiLtJ_G0007018.1 mouse_genomes_project 6 164468190 164475758 - Gm15704 lincRNA lincRNA MGP_NODShiLtJ_T0077747.1 MGP_NODShiLtJ_G0030688.1 mouse_genomes_project 6 81492775 81525327 - MGP_NODShiLtJ_P0077747 Elmod3 protein_coding protein_coding MGP_NODShiLtJ_T0077748.1 MGP_NODShiLtJ_G0030688.1 mouse_genomes_project 6 81492787 81525328 - MGP_NODShiLtJ_P0077748 Elmod3 protein_coding protein_coding MGP_NODShiLtJ_T0077749.1 MGP_NODShiLtJ_G0030688.1 mouse_genomes_project 6 81494352 81525379 - MGP_NODShiLtJ_P0077749 Elmod3 protein_coding protein_coding MGP_NODShiLtJ_T0077750.1 MGP_NODShiLtJ_G0030688.1 mouse_genomes_project 6 81496138 81525345 - MGP_NODShiLtJ_P0077750 Elmod3 protein_coding protein_coding MGP_NODShiLtJ_T0077751.1 MGP_NODShiLtJ_G0030688.1 mouse_genomes_project 6 81511408 81521994 - Elmod3 protein_coding processed_transcript MGP_NODShiLtJ_T0077752.1 MGP_NODShiLtJ_G0030688.1 mouse_genomes_project 6 81514608 81525397 - MGP_NODShiLtJ_P0077752 Elmod3 protein_coding protein_coding MGP_NODShiLtJ_T0078009.1 MGP_NODShiLtJ_G0030746.1 mouse_genomes_project 6 94807136 94823050 + MGP_NODShiLtJ_P0078009 Atp6v1b1 protein_coding protein_coding MGP_NODShiLtJ_T0078010.1 MGP_NODShiLtJ_G0030746.1 mouse_genomes_project 6 94807195 94814996 + Atp6v1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0078011.1 MGP_NODShiLtJ_G0030746.1 mouse_genomes_project 6 94807210 94815524 + MGP_NODShiLtJ_P0078011 Atp6v1b1 protein_coding protein_coding MGP_NODShiLtJ_T0078012.1 MGP_NODShiLtJ_G0030746.1 mouse_genomes_project 6 94807240 94818950 + MGP_NODShiLtJ_P0078012 Atp6v1b1 protein_coding protein_coding MGP_NODShiLtJ_T0078013.1 MGP_NODShiLtJ_G0030746.1 mouse_genomes_project 6 94816051 94818063 + Atp6v1b1 protein_coding retained_intron MGP_NODShiLtJ_T0078014.1 MGP_NODShiLtJ_G0030746.1 mouse_genomes_project 6 94821320 94822427 + Atp6v1b1 protein_coding retained_intron MGP_NODShiLtJ_T0080473.1 MGP_NODShiLtJ_G0031270.1 mouse_genomes_project 6 160524752 160628707 - MGP_NODShiLtJ_P0080473 Slco1a6 protein_coding protein_coding MGP_NODShiLtJ_T0080474.1 MGP_NODShiLtJ_G0031270.1 mouse_genomes_project 6 160564444 160628703 - Slco1a6 protein_coding retained_intron MGP_NODShiLtJ_T0080475.1 MGP_NODShiLtJ_G0031270.1 mouse_genomes_project 6 160610280 160659200 - MGP_NODShiLtJ_P0080475 Slco1a6 protein_coding protein_coding MGP_NODShiLtJ_T0077593.1 MGP_NODShiLtJ_G0030660.1 mouse_genomes_project 6 79894398 79910916 - MGP_NODShiLtJ_P0077593 Thnsl2 protein_coding protein_coding MGP_NODShiLtJ_T0077594.1 MGP_NODShiLtJ_G0030660.1 mouse_genomes_project 6 79894603 79910824 - MGP_NODShiLtJ_P0077594 Thnsl2 protein_coding protein_coding MGP_NODShiLtJ_T0077595.1 MGP_NODShiLtJ_G0030660.1 mouse_genomes_project 6 79894861 79898178 - MGP_NODShiLtJ_P0077595 Thnsl2 protein_coding protein_coding MGP_NODShiLtJ_T0077596.1 MGP_NODShiLtJ_G0030660.1 mouse_genomes_project 6 79897971 79910808 - Thnsl2 protein_coding processed_transcript MGP_NODShiLtJ_T0001886.1 MGP_NODShiLtJ_G0001798.1 mouse_genomes_project 6 17336735 17342310 + TEC TEC MGP_NODShiLtJ_T0078036.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94950627 95015066 + MGP_NODShiLtJ_P0078036 protein_coding protein_coding MGP_NODShiLtJ_T0078037.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94950628 95030279 + MGP_NODShiLtJ_P0078037 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078038.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999322 95099386 + MGP_NODShiLtJ_P0078038 protein_coding protein_coding MGP_NODShiLtJ_T0078039.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999323 95096540 + MGP_NODShiLtJ_P0078039 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078040.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999326 95017337 + protein_coding retained_intron MGP_NODShiLtJ_T0078041.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999326 95030255 + protein_coding processed_transcript MGP_NODShiLtJ_T0078042.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999328 95045530 + MGP_NODShiLtJ_P0078042 protein_coding protein_coding MGP_NODShiLtJ_T0078043.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999329 95057441 + MGP_NODShiLtJ_P0078043 protein_coding protein_coding MGP_NODShiLtJ_T0078044.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999345 95096788 + MGP_NODShiLtJ_P0078044 protein_coding protein_coding MGP_NODShiLtJ_T0078045.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999345 95096786 + MGP_NODShiLtJ_P0078045 protein_coding protein_coding MGP_NODShiLtJ_T0078046.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999347 95096566 + MGP_NODShiLtJ_P0078046 protein_coding protein_coding MGP_NODShiLtJ_T0078047.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999350 95000852 + protein_coding retained_intron MGP_NODShiLtJ_T0078048.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 94999352 95030291 + protein_coding processed_transcript MGP_NODShiLtJ_T0078049.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 95014798 95096788 + MGP_NODShiLtJ_P0078049 protein_coding protein_coding MGP_NODShiLtJ_T0078050.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 95014798 95096540 + MGP_NODShiLtJ_P0078050 protein_coding protein_coding MGP_NODShiLtJ_T0078051.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 95029897 95031977 + protein_coding retained_intron MGP_NODShiLtJ_T0078052.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 95088241 95090474 + protein_coding retained_intron MGP_NODShiLtJ_T0078053.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 95092947 95096490 + protein_coding retained_intron MGP_NODShiLtJ_T0078054.1 MGP_NODShiLtJ_G0030751.1 mouse_genomes_project 6 95094270 95096534 + protein_coding retained_intron MGP_NODShiLtJ_T0002081.1 MGP_NODShiLtJ_G0001993.1 mouse_genomes_project 6 130536005 130536845 - TEC TEC MGP_NODShiLtJ_T0000281.1 MGP_NODShiLtJ_G0000219.1 mouse_genomes_project 6 75837880 75838178 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0002116.1 MGP_NODShiLtJ_G0002028.1 mouse_genomes_project 6 154196731 154199122 + TEC TEC MGP_NODShiLtJ_T0008540.1 MGP_NODShiLtJ_G0006895.1 mouse_genomes_project 6 64595655 64597639 + Gm13236 lincRNA lincRNA MGP_NODShiLtJ_T0078796.1 MGP_NODShiLtJ_G0030901.1 mouse_genomes_project 6 120376414 120417485 - MGP_NODShiLtJ_P0078796 Il5ra protein_coding protein_coding MGP_NODShiLtJ_T0078797.1 MGP_NODShiLtJ_G0030901.1 mouse_genomes_project 6 120376663 120417396 - MGP_NODShiLtJ_P0078797 Il5ra protein_coding protein_coding MGP_NODShiLtJ_T0078798.1 MGP_NODShiLtJ_G0030901.1 mouse_genomes_project 6 120378032 120413559 - MGP_NODShiLtJ_P0078798 Il5ra protein_coding protein_coding MGP_NODShiLtJ_T0077101.1 MGP_NODShiLtJ_G0030522.1 mouse_genomes_project 6 53911055 53915917 + MGP_NODShiLtJ_P0077101 Svs1 protein_coding protein_coding MGP_NODShiLtJ_T0098161.1 MGP_NODShiLtJ_G0036573.1 mouse_genomes_project 6 77820905 77821233 - Rprl1 ribozyme ribozyme MGP_NODShiLtJ_T0078751.1 MGP_NODShiLtJ_G0030891.1 mouse_genomes_project 6 112029951 112045043 - MGP_NODShiLtJ_P0078751 Prok2 protein_coding protein_coding MGP_NODShiLtJ_T0078752.1 MGP_NODShiLtJ_G0030891.1 mouse_genomes_project 6 112030002 112045004 - MGP_NODShiLtJ_P0078752 Prok2 protein_coding protein_coding MGP_NODShiLtJ_T0078753.1 MGP_NODShiLtJ_G0030891.1 mouse_genomes_project 6 112030672 112045034 - MGP_NODShiLtJ_P0078753 Prok2 protein_coding protein_coding MGP_NODShiLtJ_T0078754.1 MGP_NODShiLtJ_G0030891.1 mouse_genomes_project 6 112040759 112045043 - MGP_NODShiLtJ_P0078754 Prok2 protein_coding protein_coding MGP_NODShiLtJ_T0101347.1 MGP_NODShiLtJ_G0039583.1 mouse_genomes_project 6 46711567 46740295 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101348.1 MGP_NODShiLtJ_G0039583.1 mouse_genomes_project 6 46739145 46740060 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0079899.1 MGP_NODShiLtJ_G0031108.1 mouse_genomes_project 6 141998183 142065494 - MGP_NODShiLtJ_P0079899 Ntf3 protein_coding protein_coding MGP_NODShiLtJ_T0079900.1 MGP_NODShiLtJ_G0031108.1 mouse_genomes_project 6 141998183 142063740 - MGP_NODShiLtJ_P0079900 Ntf3 protein_coding protein_coding MGP_NODShiLtJ_T0079901.1 MGP_NODShiLtJ_G0031108.1 mouse_genomes_project 6 141998183 142065689 - MGP_NODShiLtJ_P0079901 Ntf3 protein_coding protein_coding MGP_NODShiLtJ_T0001976.1 MGP_NODShiLtJ_G0001888.1 mouse_genomes_project 6 87369286 87370143 - TEC TEC MGP_NODShiLtJ_T0080269.1 MGP_NODShiLtJ_G0031230.1 mouse_genomes_project 6 152858956 152880929 + MGP_NODShiLtJ_P0080269 Emp1 protein_coding protein_coding MGP_NODShiLtJ_T0080270.1 MGP_NODShiLtJ_G0031230.1 mouse_genomes_project 6 152859347 152880929 + MGP_NODShiLtJ_P0080270 Emp1 protein_coding protein_coding MGP_NODShiLtJ_T0080271.1 MGP_NODShiLtJ_G0031230.1 mouse_genomes_project 6 152859347 152880929 + MGP_NODShiLtJ_P0080271 Emp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080272.1 MGP_NODShiLtJ_G0031230.1 mouse_genomes_project 6 152859424 152878129 + Emp1 protein_coding retained_intron MGP_NODShiLtJ_T0080273.1 MGP_NODShiLtJ_G0031230.1 mouse_genomes_project 6 152859484 152862085 + Emp1 protein_coding retained_intron MGP_NODShiLtJ_T0080274.1 MGP_NODShiLtJ_G0031230.1 mouse_genomes_project 6 152863938 152880929 + MGP_NODShiLtJ_P0080274 Emp1 protein_coding protein_coding MGP_NODShiLtJ_T0015336.1 MGP_NODShiLtJ_G0013444.1 mouse_genomes_project 6 94649559 94650377 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079585.1 MGP_NODShiLtJ_G0031046.1 mouse_genomes_project 6 138640105 138675416 + MGP_NODShiLtJ_P0079585 Clec4b2 protein_coding protein_coding MGP_NODShiLtJ_T0002086.1 MGP_NODShiLtJ_G0001998.1 mouse_genomes_project 6 132726493 132728864 - TEC TEC MGP_NODShiLtJ_T0010701.1 MGP_NODShiLtJ_G0008834.1 mouse_genomes_project 6 138270788 138270849 + Mir7231 miRNA miRNA MGP_NODShiLtJ_T0002520.1 MGP_NODShiLtJ_G0002421.1 mouse_genomes_project 6 45004350 45004401 + MGP_NODShiLtJ_P0002520 Trbj2-2 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0015433.1 MGP_NODShiLtJ_G0013541.1 mouse_genomes_project 6 131681839 131682269 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079320.1 MGP_NODShiLtJ_G0030995.1 mouse_genomes_project 6 134053529 134104247 + MGP_NODShiLtJ_P0079320 Dcp1b protein_coding protein_coding MGP_NODShiLtJ_T0079321.1 MGP_NODShiLtJ_G0030995.1 mouse_genomes_project 6 134053564 134102814 + MGP_NODShiLtJ_P0079321 Dcp1b protein_coding protein_coding MGP_NODShiLtJ_T0079322.1 MGP_NODShiLtJ_G0030995.1 mouse_genomes_project 6 134071856 134102835 + Dcp1b protein_coding retained_intron MGP_NODShiLtJ_T0079323.1 MGP_NODShiLtJ_G0030995.1 mouse_genomes_project 6 134079966 134097484 + Dcp1b protein_coding retained_intron MGP_NODShiLtJ_T0079324.1 MGP_NODShiLtJ_G0030995.1 mouse_genomes_project 6 134100172 134104245 + Dcp1b protein_coding retained_intron MGP_NODShiLtJ_T0004947.1 MGP_NODShiLtJ_G0004232.1 mouse_genomes_project 6 96081649 96085523 + Gm44012 antisense antisense MGP_NODShiLtJ_T0010672.1 MGP_NODShiLtJ_G0008805.1 mouse_genomes_project 6 94049792 94049855 + Mir7040 miRNA miRNA MGP_NODShiLtJ_T0008528.1 MGP_NODShiLtJ_G0006885.1 mouse_genomes_project 6 57472442 57477270 + Hottip lincRNA lincRNA MGP_NODShiLtJ_T0008529.1 MGP_NODShiLtJ_G0006885.1 mouse_genomes_project 6 57472451 57476746 + Hottip lincRNA lincRNA MGP_NODShiLtJ_T0079695.1 MGP_NODShiLtJ_G0031073.1 mouse_genomes_project 6 140547191 140560084 - MGP_NODShiLtJ_P0079695 Lrrc23 protein_coding protein_coding MGP_NODShiLtJ_T0079696.1 MGP_NODShiLtJ_G0031073.1 mouse_genomes_project 6 140547197 140560093 - MGP_NODShiLtJ_P0079696 Lrrc23 protein_coding protein_coding MGP_NODShiLtJ_T0079697.1 MGP_NODShiLtJ_G0031073.1 mouse_genomes_project 6 140547933 140554974 - Lrrc23 protein_coding retained_intron MGP_NODShiLtJ_T0079698.1 MGP_NODShiLtJ_G0031073.1 mouse_genomes_project 6 140558627 140560083 - MGP_NODShiLtJ_P0079698 Lrrc23 protein_coding protein_coding MGP_NODShiLtJ_T0079699.1 MGP_NODShiLtJ_G0031073.1 mouse_genomes_project 6 140559266 140560070 - MGP_NODShiLtJ_P0079699 Lrrc23 protein_coding protein_coding MGP_NODShiLtJ_T0005007.1 MGP_NODShiLtJ_G0004267.1 mouse_genomes_project 6 128103727 128105857 - Gm44199 antisense antisense MGP_NODShiLtJ_T0101373.1 MGP_NODShiLtJ_G0039592.1 mouse_genomes_project 6 145320559 145326978 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101374.1 MGP_NODShiLtJ_G0039592.1 mouse_genomes_project 6 145325032 145326970 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0010646.1 MGP_NODShiLtJ_G0008779.1 mouse_genomes_project 6 31119208 31119281 + Mir129-1 miRNA miRNA MGP_NODShiLtJ_T0005020.1 MGP_NODShiLtJ_G0004280.1 mouse_genomes_project 6 138248717 138260015 - Gm26826 antisense antisense MGP_NODShiLtJ_T0077944.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94188333 94225528 + MGP_NODShiLtJ_P0077944 Dctn1 protein_coding protein_coding MGP_NODShiLtJ_T0077945.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94188364 94225529 + MGP_NODShiLtJ_P0077945 Dctn1 protein_coding protein_coding MGP_NODShiLtJ_T0077946.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94188417 94214128 + MGP_NODShiLtJ_P0077946 Dctn1 protein_coding protein_coding MGP_NODShiLtJ_T0077947.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94202035 94225382 + MGP_NODShiLtJ_P0077947 Dctn1 protein_coding protein_coding MGP_NODShiLtJ_T0077948.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94202038 94225528 + MGP_NODShiLtJ_P0077948 Dctn1 protein_coding protein_coding MGP_NODShiLtJ_T0077949.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94202062 94213699 + MGP_NODShiLtJ_P0077949 Dctn1 protein_coding protein_coding MGP_NODShiLtJ_T0077950.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94210490 94225529 + MGP_NODShiLtJ_P0077950 Dctn1 protein_coding protein_coding MGP_NODShiLtJ_T0077951.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94213156 94214153 + Dctn1 protein_coding retained_intron MGP_NODShiLtJ_T0077952.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94219545 94220790 + Dctn1 protein_coding retained_intron MGP_NODShiLtJ_T0077953.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94219744 94220489 + Dctn1 protein_coding retained_intron MGP_NODShiLtJ_T0077954.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94220303 94221278 + Dctn1 protein_coding retained_intron MGP_NODShiLtJ_T0077955.1 MGP_NODShiLtJ_G0030734.1 mouse_genomes_project 6 94222223 94223826 + Dctn1 protein_coding retained_intron MGP_NODShiLtJ_T0100687.1 MGP_NODShiLtJ_G0039081.1 mouse_genomes_project 6 83491673 83491805 + Gm26179 snoRNA snoRNA MGP_NODShiLtJ_T0000303.1 MGP_NODShiLtJ_G0000241.1 mouse_genomes_project 6 77367625 77367911 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0098209.1 MGP_NODShiLtJ_G0036621.1 mouse_genomes_project 6 140924405 140924541 + Gm23751 scaRNA scaRNA MGP_NODShiLtJ_T0100657.1 MGP_NODShiLtJ_G0039051.1 mouse_genomes_project 6 26254125 26254248 - Gm22529 snoRNA snoRNA MGP_NODShiLtJ_T0008611.1 MGP_NODShiLtJ_G0006951.1 mouse_genomes_project 6 112270619 112295320 - Gm44442 lincRNA lincRNA MGP_NODShiLtJ_T0008612.1 MGP_NODShiLtJ_G0006951.1 mouse_genomes_project 6 112270620 112275155 - Gm44442 lincRNA lincRNA MGP_NODShiLtJ_T0004996.1 MGP_NODShiLtJ_G0004261.1 mouse_genomes_project 6 122372315 122460889 - 0610040F04Rik antisense antisense MGP_NODShiLtJ_T0004997.1 MGP_NODShiLtJ_G0004261.1 mouse_genomes_project 6 122406525 122410178 - 0610040F04Rik antisense antisense MGP_NODShiLtJ_T0099428.1 MGP_NODShiLtJ_G0037822.1 mouse_genomes_project 6 53158249 53158449 + Gm22122 snRNA snRNA MGP_NODShiLtJ_T0079114.1 MGP_NODShiLtJ_G0030958.1 mouse_genomes_project 6 130201211 130221894 + MGP_NODShiLtJ_P0079114 Mkrn2 protein_coding protein_coding MGP_NODShiLtJ_T0079115.1 MGP_NODShiLtJ_G0030958.1 mouse_genomes_project 6 130201253 130212684 + Mkrn2 protein_coding processed_transcript MGP_NODShiLtJ_T0079116.1 MGP_NODShiLtJ_G0030958.1 mouse_genomes_project 6 130210587 130211653 + Mkrn2 protein_coding retained_intron MGP_NODShiLtJ_T0077401.1 MGP_NODShiLtJ_G0030597.1 mouse_genomes_project 6 62859388 62860291 + MGP_NODShiLtJ_P0077401 Vmn1r13 protein_coding protein_coding MGP_NODShiLtJ_T0002012.1 MGP_NODShiLtJ_G0001924.1 mouse_genomes_project 6 98561642 98563693 - TEC TEC MGP_NODShiLtJ_T0015510.1 MGP_NODShiLtJ_G0013618.1 mouse_genomes_project 6 151133214 151133693 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077493.1 MGP_NODShiLtJ_G0030632.1 mouse_genomes_project 6 70653318 70733657 + Grid2 protein_coding processed_transcript MGP_NODShiLtJ_T0077494.1 MGP_NODShiLtJ_G0030632.1 mouse_genomes_project 6 70653448 71980549 + Grid2 protein_coding processed_transcript MGP_NODShiLtJ_T0077495.1 MGP_NODShiLtJ_G0030632.1 mouse_genomes_project 6 70653469 72520721 + MGP_NODShiLtJ_P0077495 Grid2 protein_coding protein_coding MGP_NODShiLtJ_T0077496.1 MGP_NODShiLtJ_G0030632.1 mouse_genomes_project 6 70653637 70996704 + Grid2 protein_coding retained_intron MGP_NODShiLtJ_T0077497.1 MGP_NODShiLtJ_G0030632.1 mouse_genomes_project 6 70654268 72085922 + Grid2 protein_coding retained_intron MGP_NODShiLtJ_T0077498.1 MGP_NODShiLtJ_G0030632.1 mouse_genomes_project 6 71836561 71858672 + Grid2 protein_coding retained_intron MGP_NODShiLtJ_T0015186.1 MGP_NODShiLtJ_G0013294.1 mouse_genomes_project 6 43068575 43069659 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076578.1 MGP_NODShiLtJ_G0030375.1 mouse_genomes_project 6 37516407 37550423 - MGP_NODShiLtJ_P0076578 protein_coding protein_coding MGP_NODShiLtJ_T0076579.1 MGP_NODShiLtJ_G0030375.1 mouse_genomes_project 6 37517064 37560821 - MGP_NODShiLtJ_P0076579 protein_coding protein_coding MGP_NODShiLtJ_T0076580.1 MGP_NODShiLtJ_G0030375.1 mouse_genomes_project 6 37518632 37519707 - protein_coding processed_transcript MGP_NODShiLtJ_T0076581.1 MGP_NODShiLtJ_G0030375.1 mouse_genomes_project 6 37519565 37527033 - MGP_NODShiLtJ_P0076581 protein_coding protein_coding MGP_NODShiLtJ_T0076582.1 MGP_NODShiLtJ_G0030375.1 mouse_genomes_project 6 37524968 37551478 - MGP_NODShiLtJ_P0076582 protein_coding protein_coding MGP_NODShiLtJ_T0008592.1 MGP_NODShiLtJ_G0006937.1 mouse_genomes_project 6 100736078 100741157 - Gm839 lincRNA lincRNA MGP_NODShiLtJ_T0080157.1 MGP_NODShiLtJ_G0031185.1 mouse_genomes_project 6 148462707 148463616 - MGP_NODShiLtJ_P0080157 Tas2r104 protein_coding protein_coding MGP_NODShiLtJ_T0080326.1 MGP_NODShiLtJ_G0031245.1 mouse_genomes_project 6 154591886 154635826 + MGP_NODShiLtJ_P0080326 Pde6h protein_coding protein_coding MGP_NODShiLtJ_T0080330.1 MGP_NODShiLtJ_G0031245.1 mouse_genomes_project 6 154627155 154641192 + MGP_NODShiLtJ_P0080330 Pde6h protein_coding protein_coding MGP_NODShiLtJ_T0080331.1 MGP_NODShiLtJ_G0031245.1 mouse_genomes_project 6 154627165 154636071 + Pde6h protein_coding retained_intron MGP_NODShiLtJ_T0080332.1 MGP_NODShiLtJ_G0031245.1 mouse_genomes_project 6 154631878 154635857 + MGP_NODShiLtJ_P0080332 Pde6h protein_coding protein_coding MGP_NODShiLtJ_T0098428.1 MGP_NODShiLtJ_G0036829.1 mouse_genomes_project 6 43358166 43369866 + Gm26638 sense_intronic sense_intronic MGP_NODShiLtJ_T0098066.1 MGP_NODShiLtJ_G0036478.1 mouse_genomes_project 6 106759725 106759868 - Gm24601 rRNA rRNA MGP_NODShiLtJ_T0076736.1 MGP_NODShiLtJ_G0030409.1 mouse_genomes_project 6 42781303 42792413 + MGP_NODShiLtJ_P0076736 Ndufb2 protein_coding protein_coding MGP_NODShiLtJ_T0076737.1 MGP_NODShiLtJ_G0030409.1 mouse_genomes_project 6 42781312 42789008 + MGP_NODShiLtJ_P0076737 Ndufb2 protein_coding protein_coding MGP_NODShiLtJ_T0076738.1 MGP_NODShiLtJ_G0030409.1 mouse_genomes_project 6 42781314 42788959 + Ndufb2 protein_coding processed_transcript MGP_NODShiLtJ_T0076739.1 MGP_NODShiLtJ_G0030409.1 mouse_genomes_project 6 42781317 42786284 + Ndufb2 protein_coding retained_intron MGP_NODShiLtJ_T0076740.1 MGP_NODShiLtJ_G0030409.1 mouse_genomes_project 6 42786800 42788829 + Ndufb2 protein_coding retained_intron MGP_NODShiLtJ_T0076741.1 MGP_NODShiLtJ_G0030409.1 mouse_genomes_project 6 42791319 42792916 + Ndufb2 protein_coding processed_transcript MGP_NODShiLtJ_T0015349.1 MGP_NODShiLtJ_G0013457.1 mouse_genomes_project 6 96351852 96352792 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008654.1 MGP_NODShiLtJ_G0006989.1 mouse_genomes_project 6 143309734 143322814 - Gm38404 lincRNA lincRNA MGP_NODShiLtJ_T0077290.1 MGP_NODShiLtJ_G0030565.1 mouse_genomes_project 6 59859418 59867601 - MGP_NODShiLtJ_P0077290 Scrn1 protein_coding protein_coding MGP_NODShiLtJ_T0077291.1 MGP_NODShiLtJ_G0030565.1 mouse_genomes_project 6 59864143 59927112 - MGP_NODShiLtJ_P0077291 Scrn1 protein_coding protein_coding MGP_NODShiLtJ_T0077292.1 MGP_NODShiLtJ_G0030565.1 mouse_genomes_project 6 59864518 59880119 - MGP_NODShiLtJ_P0077292 Scrn1 protein_coding protein_coding MGP_NODShiLtJ_T0077293.1 MGP_NODShiLtJ_G0030565.1 mouse_genomes_project 6 59867347 59873057 - Scrn1 protein_coding retained_intron MGP_NODShiLtJ_T0077294.1 MGP_NODShiLtJ_G0030565.1 mouse_genomes_project 6 59895208 59915102 - MGP_NODShiLtJ_P0077294 Scrn1 protein_coding protein_coding MGP_NODShiLtJ_T0077295.1 MGP_NODShiLtJ_G0030565.1 mouse_genomes_project 6 59912364 59915093 - Scrn1 protein_coding processed_transcript MGP_NODShiLtJ_T0002076.1 MGP_NODShiLtJ_G0001988.1 mouse_genomes_project 6 127900581 127903698 + TEC TEC MGP_NODShiLtJ_T0004888.1 MGP_NODShiLtJ_G0004193.1 mouse_genomes_project 6 46964019 46965333 - Gm44731 antisense antisense MGP_NODShiLtJ_T0008669.1 MGP_NODShiLtJ_G0006999.1 mouse_genomes_project 6 151803459 151823683 - Gm44448 lincRNA lincRNA MGP_NODShiLtJ_T0008524.1 MGP_NODShiLtJ_G0006883.1 mouse_genomes_project 6 57210161 57224508 + Gm44077 lincRNA lincRNA MGP_NODShiLtJ_T0077813.1 MGP_NODShiLtJ_G0030706.1 mouse_genomes_project 6 88612419 88614722 - Reg3g protein_coding retained_intron MGP_NODShiLtJ_T0077814.1 MGP_NODShiLtJ_G0030706.1 mouse_genomes_project 6 88612419 88615023 - MGP_NODShiLtJ_P0077814 Reg3g protein_coding protein_coding MGP_NODShiLtJ_T0079892.1 MGP_NODShiLtJ_G0031107.1 mouse_genomes_project 6 141554237 141841317 + Ano2 protein_coding retained_intron MGP_NODShiLtJ_T0079893.1 MGP_NODShiLtJ_G0031107.1 mouse_genomes_project 6 141554237 141928202 + MGP_NODShiLtJ_P0079893 Ano2 protein_coding protein_coding MGP_NODShiLtJ_T0079894.1 MGP_NODShiLtJ_G0031107.1 mouse_genomes_project 6 141583391 141928202 + MGP_NODShiLtJ_P0079894 Ano2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079895.1 MGP_NODShiLtJ_G0031107.1 mouse_genomes_project 6 141584241 141668338 + Ano2 protein_coding processed_transcript MGP_NODShiLtJ_T0079896.1 MGP_NODShiLtJ_G0031107.1 mouse_genomes_project 6 141584355 141927590 + MGP_NODShiLtJ_P0079896 Ano2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079897.1 MGP_NODShiLtJ_G0031107.1 mouse_genomes_project 6 141693364 141785571 + Ano2 protein_coding processed_transcript MGP_NODShiLtJ_T0079898.1 MGP_NODShiLtJ_G0031107.1 mouse_genomes_project 6 141693365 141928200 + MGP_NODShiLtJ_P0079898 Ano2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077076.1 MGP_NODShiLtJ_G0030516.1 mouse_genomes_project 6 53678696 53687526 - MGP_NODShiLtJ_P0077076 Gimap3 protein_coding protein_coding MGP_NODShiLtJ_T0077077.1 MGP_NODShiLtJ_G0030516.1 mouse_genomes_project 6 53681756 53683599 - MGP_NODShiLtJ_P0077077 Gimap3 protein_coding protein_coding MGP_NODShiLtJ_T0101978.1 MGP_NODShiLtJ_G0040146.1 mouse_genomes_project 6 36900972 36901951 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100682.1 MGP_NODShiLtJ_G0039076.1 mouse_genomes_project 6 76646382 76646519 - Gm25436 snoRNA snoRNA MGP_NODShiLtJ_T0078472.1 MGP_NODShiLtJ_G0030830.1 mouse_genomes_project 6 101399885 101400954 - MGP_NODShiLtJ_P0078472 Vmn1r43 protein_coding protein_coding MGP_NODShiLtJ_T0005008.1 MGP_NODShiLtJ_G0004268.1 mouse_genomes_project 6 128136958 128137910 - Gm43964 antisense antisense MGP_NODShiLtJ_T0011508.1 MGP_NODShiLtJ_G0009641.1 mouse_genomes_project 6 1301715 1302042 + Gm24442 misc_RNA misc_RNA MGP_NODShiLtJ_T0077225.1 MGP_NODShiLtJ_G0030553.1 mouse_genomes_project 6 57448389 57452078 - MGP_NODShiLtJ_P0077225 Hoxa11 protein_coding protein_coding MGP_NODShiLtJ_T0077226.1 MGP_NODShiLtJ_G0030553.1 mouse_genomes_project 6 57448393 57452063 - Hoxa11 protein_coding processed_transcript MGP_NODShiLtJ_T0102005.1 MGP_NODShiLtJ_G0040173.1 mouse_genomes_project 6 64391002 64391917 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015492.1 MGP_NODShiLtJ_G0013600.1 mouse_genomes_project 6 147724010 147724131 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004910.1 MGP_NODShiLtJ_G0004208.1 mouse_genomes_project 6 65041275 65048636 + Gm45060 antisense antisense MGP_NODShiLtJ_T0080297.1 MGP_NODShiLtJ_G0031234.1 mouse_genomes_project 6 154188390 154250579 - MGP_NODShiLtJ_P0080297 Plbd1 protein_coding protein_coding MGP_NODShiLtJ_T0080298.1 MGP_NODShiLtJ_G0031234.1 mouse_genomes_project 6 154189628 154250524 - Plbd1 protein_coding retained_intron MGP_NODShiLtJ_T0080299.1 MGP_NODShiLtJ_G0031234.1 mouse_genomes_project 6 154190201 154208988 - Plbd1 protein_coding retained_intron MGP_NODShiLtJ_T0080300.1 MGP_NODShiLtJ_G0031234.1 mouse_genomes_project 6 154219491 154250214 - MGP_NODShiLtJ_P0080300 Plbd1 protein_coding protein_coding MGP_NODShiLtJ_T0008419.1 MGP_NODShiLtJ_G0006815.1 mouse_genomes_project 6 3372381 3419203 + Gm20619 lincRNA lincRNA MGP_NODShiLtJ_T0008420.1 MGP_NODShiLtJ_G0006815.1 mouse_genomes_project 6 3372409 3503983 + Gm20619 lincRNA lincRNA MGP_NODShiLtJ_T0008421.1 MGP_NODShiLtJ_G0006815.1 mouse_genomes_project 6 3372412 3518342 + Gm20619 lincRNA lincRNA MGP_NODShiLtJ_T0008422.1 MGP_NODShiLtJ_G0006815.1 mouse_genomes_project 6 3372440 3419199 + Gm20619 lincRNA lincRNA MGP_NODShiLtJ_T0008423.1 MGP_NODShiLtJ_G0006815.1 mouse_genomes_project 6 3438919 3503778 + Gm20619 lincRNA lincRNA MGP_NODShiLtJ_T0080070.1 MGP_NODShiLtJ_G0031152.1 mouse_genomes_project 6 145757289 145768670 - MGP_NODShiLtJ_P0080070 Clec12b protein_coding protein_coding MGP_NODShiLtJ_T0080071.1 MGP_NODShiLtJ_G0031152.1 mouse_genomes_project 6 145757567 145769041 - MGP_NODShiLtJ_P0080071 Clec12b protein_coding protein_coding MGP_NODShiLtJ_T0080153.1 MGP_NODShiLtJ_G0031181.1 mouse_genomes_project 6 148242851 148256284 + MGP_NODShiLtJ_P0080153 protein_coding protein_coding MGP_NODShiLtJ_T0078772.1 MGP_NODShiLtJ_G0030898.1 mouse_genomes_project 6 116449347 116711735 + MGP_NODShiLtJ_P0078772 Chl1 protein_coding protein_coding MGP_NODShiLtJ_T0078773.1 MGP_NODShiLtJ_G0030898.1 mouse_genomes_project 6 116449724 116588835 + Chl1 protein_coding retained_intron MGP_NODShiLtJ_T0078774.1 MGP_NODShiLtJ_G0030898.1 mouse_genomes_project 6 116449830 116692325 + MGP_NODShiLtJ_P0078774 Chl1 protein_coding protein_coding MGP_NODShiLtJ_T0078775.1 MGP_NODShiLtJ_G0030898.1 mouse_genomes_project 6 116449935 116687721 + MGP_NODShiLtJ_P0078775 Chl1 protein_coding protein_coding MGP_NODShiLtJ_T0078776.1 MGP_NODShiLtJ_G0030898.1 mouse_genomes_project 6 116450091 116611139 + MGP_NODShiLtJ_P0078776 Chl1 protein_coding protein_coding MGP_NODShiLtJ_T0078777.1 MGP_NODShiLtJ_G0030898.1 mouse_genomes_project 6 116653316 116688079 + MGP_NODShiLtJ_P0078777 Chl1 protein_coding protein_coding MGP_NODShiLtJ_T0002515.1 MGP_NODShiLtJ_G0002417.1 mouse_genomes_project 6 44994601 44994651 + MGP_NODShiLtJ_P0002515 Trbj1-5 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0080154.1 MGP_NODShiLtJ_G0031182.1 mouse_genomes_project 6 148404685 148405775 - MGP_NODShiLtJ_P0080154 Tas2r130 protein_coding protein_coding MGP_NODShiLtJ_T0080524.1 MGP_NODShiLtJ_G0031282.1 mouse_genomes_project 6 161286491 161309302 - MGP_NODShiLtJ_P0080524 Sult6b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080525.1 MGP_NODShiLtJ_G0031282.1 mouse_genomes_project 6 161287067 161309266 - MGP_NODShiLtJ_P0080525 Sult6b2 protein_coding protein_coding MGP_NODShiLtJ_T0015123.1 MGP_NODShiLtJ_G0013231.1 mouse_genomes_project 6 5125647 5125837 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002045.1 MGP_NODShiLtJ_G0001957.1 mouse_genomes_project 6 104830722 104832185 + TEC TEC MGP_NODShiLtJ_T0008715.1 MGP_NODShiLtJ_G0007031.1 mouse_genomes_project 6 168144417 168160190 - 1700003I16Rik lincRNA lincRNA MGP_NODShiLtJ_T0077381.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62437342 62479765 - MGP_NODShiLtJ_P0077381 Nt5c3 protein_coding protein_coding MGP_NODShiLtJ_T0077382.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62437342 62457767 - MGP_NODShiLtJ_P0077382 Nt5c3 protein_coding protein_coding MGP_NODShiLtJ_T0077383.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62437893 62479652 - MGP_NODShiLtJ_P0077383 Nt5c3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077384.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62437926 62479709 - MGP_NODShiLtJ_P0077384 Nt5c3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077385.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62439733 62479557 - MGP_NODShiLtJ_P0077385 Nt5c3 protein_coding protein_coding MGP_NODShiLtJ_T0077386.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62441607 62444806 - Nt5c3 protein_coding retained_intron MGP_NODShiLtJ_T0077387.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62447419 62479723 - Nt5c3 protein_coding processed_transcript MGP_NODShiLtJ_T0077388.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62448681 62479690 - Nt5c3 protein_coding processed_transcript MGP_NODShiLtJ_T0077389.1 MGP_NODShiLtJ_G0030587.1 mouse_genomes_project 6 62451674 62457764 - Nt5c3 protein_coding retained_intron MGP_NODShiLtJ_T0077808.1 MGP_NODShiLtJ_G0030703.1 mouse_genomes_project 6 88526916 88530035 + MGP_NODShiLtJ_P0077808 Reg3a protein_coding protein_coding MGP_NODShiLtJ_T0002038.1 MGP_NODShiLtJ_G0001950.1 mouse_genomes_project 6 103320116 103321142 - TEC TEC MGP_NODShiLtJ_T0002140.1 MGP_NODShiLtJ_G0002052.1 mouse_genomes_project 6 167210918 167214430 - TEC TEC MGP_NODShiLtJ_T0078473.1 MGP_NODShiLtJ_G0030831.1 mouse_genomes_project 6 101414512 101424391 + MGP_NODShiLtJ_P0078473 Vmn1r44 protein_coding protein_coding MGP_NODShiLtJ_T0078474.1 MGP_NODShiLtJ_G0030831.1 mouse_genomes_project 6 101424083 101425191 + MGP_NODShiLtJ_P0078474 Vmn1r44 protein_coding protein_coding MGP_NODShiLtJ_T0015264.1 MGP_NODShiLtJ_G0013372.1 mouse_genomes_project 6 71855146 71855311 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078110.1 MGP_NODShiLtJ_G0030762.1 mouse_genomes_project 6 96691675 96696050 - MGP_NODShiLtJ_P0078110 Pradc1 protein_coding protein_coding MGP_NODShiLtJ_T0078111.1 MGP_NODShiLtJ_G0030762.1 mouse_genomes_project 6 96691906 96696072 - Pradc1 protein_coding retained_intron MGP_NODShiLtJ_T0078112.1 MGP_NODShiLtJ_G0030762.1 mouse_genomes_project 6 96691907 96696119 - MGP_NODShiLtJ_P0078112 Pradc1 protein_coding protein_coding MGP_NODShiLtJ_T0078113.1 MGP_NODShiLtJ_G0030762.1 mouse_genomes_project 6 96692080 96696816 - Pradc1 protein_coding processed_transcript MGP_NODShiLtJ_T0078114.1 MGP_NODShiLtJ_G0030762.1 mouse_genomes_project 6 96692405 96696095 - Pradc1 protein_coding processed_transcript MGP_NODShiLtJ_T0078115.1 MGP_NODShiLtJ_G0030762.1 mouse_genomes_project 6 96692420 96696127 - Pradc1 protein_coding retained_intron MGP_NODShiLtJ_T0078116.1 MGP_NODShiLtJ_G0030762.1 mouse_genomes_project 6 96692552 96696084 - Pradc1 protein_coding processed_transcript MGP_NODShiLtJ_T0015322.1 MGP_NODShiLtJ_G0013430.1 mouse_genomes_project 6 85412682 85413081 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077622.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80409084 80455213 - MGP_NODShiLtJ_P0077622 Kdm3a protein_coding protein_coding MGP_NODShiLtJ_T0077623.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80409086 80454994 - MGP_NODShiLtJ_P0077623 Kdm3a protein_coding protein_coding MGP_NODShiLtJ_T0077624.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80409149 80455298 - MGP_NODShiLtJ_P0077624 Kdm3a protein_coding protein_coding MGP_NODShiLtJ_T0077625.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80410240 80412057 - Kdm3a protein_coding retained_intron MGP_NODShiLtJ_T0077626.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80410669 80412696 - Kdm3a protein_coding retained_intron MGP_NODShiLtJ_T0077627.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80414075 80417941 - Kdm3a protein_coding retained_intron MGP_NODShiLtJ_T0077628.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80414720 80431225 - Kdm3a protein_coding processed_transcript MGP_NODShiLtJ_T0077629.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80417730 80420179 - Kdm3a protein_coding retained_intron MGP_NODShiLtJ_T0077630.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80420085 80454994 - MGP_NODShiLtJ_P0077630 Kdm3a protein_coding protein_coding MGP_NODShiLtJ_T0077631.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80420186 80421915 - Kdm3a protein_coding retained_intron MGP_NODShiLtJ_T0077632.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80421482 80434046 - MGP_NODShiLtJ_P0077632 Kdm3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077633.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80423500 80444003 - Kdm3a protein_coding retained_intron MGP_NODShiLtJ_T0077634.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80423889 80424738 - Kdm3a protein_coding processed_transcript MGP_NODShiLtJ_T0077635.1 MGP_NODShiLtJ_G0030669.1 mouse_genomes_project 6 80433787 80443726 - Kdm3a protein_coding processed_transcript MGP_NODShiLtJ_T0079806.1 MGP_NODShiLtJ_G0031090.1 mouse_genomes_project 6 140867640 140882173 + MGP_NODShiLtJ_P0079806 Lpar5 protein_coding protein_coding MGP_NODShiLtJ_T0079807.1 MGP_NODShiLtJ_G0031090.1 mouse_genomes_project 6 140870994 140881509 + MGP_NODShiLtJ_P0079807 Lpar5 protein_coding protein_coding MGP_NODShiLtJ_T0079808.1 MGP_NODShiLtJ_G0031090.1 mouse_genomes_project 6 140870994 140882173 + MGP_NODShiLtJ_P0079808 Lpar5 protein_coding protein_coding MGP_NODShiLtJ_T0077477.1 MGP_NODShiLtJ_G0030628.1 mouse_genomes_project 6 67309383 67427213 - MGP_NODShiLtJ_P0077477 Snca protein_coding protein_coding MGP_NODShiLtJ_T0077478.1 MGP_NODShiLtJ_G0030628.1 mouse_genomes_project 6 67309387 67426362 - MGP_NODShiLtJ_P0077478 Snca protein_coding protein_coding MGP_NODShiLtJ_T0077480.1 MGP_NODShiLtJ_G0030628.1 mouse_genomes_project 6 67404048 67424914 - Snca protein_coding processed_transcript MGP_NODShiLtJ_T0077481.1 MGP_NODShiLtJ_G0030628.1 mouse_genomes_project 6 67410099 67426230 - Snca protein_coding retained_intron MGP_NODShiLtJ_T0015231.1 MGP_NODShiLtJ_G0013339.1 mouse_genomes_project 6 57333110 57333379 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077435.1 MGP_NODShiLtJ_G0030614.1 mouse_genomes_project 6 63726884 63727830 - MGP_NODShiLtJ_P0077435 Vmn1r24 protein_coding protein_coding MGP_NODShiLtJ_T0077857.1 MGP_NODShiLtJ_G0030717.1 mouse_genomes_project 6 94029502 94032039 - MGP_NODShiLtJ_P0077857 Dok1 protein_coding protein_coding MGP_NODShiLtJ_T0077858.1 MGP_NODShiLtJ_G0030717.1 mouse_genomes_project 6 94029508 94032036 - MGP_NODShiLtJ_P0077858 Dok1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077859.1 MGP_NODShiLtJ_G0030717.1 mouse_genomes_project 6 94030418 94031129 - MGP_NODShiLtJ_P0077859 Dok1 protein_coding protein_coding MGP_NODShiLtJ_T0077421.1 MGP_NODShiLtJ_G0030608.1 mouse_genomes_project 6 63403754 63445579 + MGP_NODShiLtJ_P0077421 Lancl2 protein_coding protein_coding MGP_NODShiLtJ_T0077422.1 MGP_NODShiLtJ_G0030608.1 mouse_genomes_project 6 63403850 63444622 + MGP_NODShiLtJ_P0077422 Lancl2 protein_coding protein_coding MGP_NODShiLtJ_T0077423.1 MGP_NODShiLtJ_G0030608.1 mouse_genomes_project 6 63404301 63445578 + MGP_NODShiLtJ_P0077423 Lancl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015260.1 MGP_NODShiLtJ_G0013368.1 mouse_genomes_project 6 69831788 69832025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079555.1 MGP_NODShiLtJ_G0031035.1 mouse_genomes_project 6 138029825 138033338 + MGP_NODShiLtJ_P0079555 Dppa3 protein_coding protein_coding MGP_NODShiLtJ_T0075877.1 MGP_NODShiLtJ_G0030244.1 mouse_genomes_project 6 2540971 2557898 - MGP_NODShiLtJ_P0075877 Pdk4 protein_coding protein_coding MGP_NODShiLtJ_T0075878.1 MGP_NODShiLtJ_G0030244.1 mouse_genomes_project 6 2552690 2557850 - MGP_NODShiLtJ_P0075878 Pdk4 protein_coding protein_coding MGP_NODShiLtJ_T0075879.1 MGP_NODShiLtJ_G0030244.1 mouse_genomes_project 6 2555962 2557864 - Pdk4 protein_coding retained_intron MGP_NODShiLtJ_T0015312.1 MGP_NODShiLtJ_G0013420.1 mouse_genomes_project 6 80721822 80722615 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075811.1 MGP_NODShiLtJ_G0030231.1 mouse_genomes_project 6 800829 807580 - MGP_NODShiLtJ_P0075811 Tfpi2 protein_coding protein_coding MGP_NODShiLtJ_T0075812.1 MGP_NODShiLtJ_G0030231.1 mouse_genomes_project 6 801619 831164 - MGP_NODShiLtJ_P0075812 Tfpi2 protein_coding protein_coding MGP_NODShiLtJ_T0075813.1 MGP_NODShiLtJ_G0030231.1 mouse_genomes_project 6 804080 831225 - MGP_NODShiLtJ_P0075813 Tfpi2 protein_coding protein_coding MGP_NODShiLtJ_T0076880.1 MGP_NODShiLtJ_G0030463.1 mouse_genomes_project 6 46113876 46116596 - Tcaf3 protein_coding processed_transcript MGP_NODShiLtJ_T0076881.1 MGP_NODShiLtJ_G0030463.1 mouse_genomes_project 6 46116179 46126307 - MGP_NODShiLtJ_P0076881 Tcaf3 protein_coding protein_coding MGP_NODShiLtJ_T0076882.1 MGP_NODShiLtJ_G0030463.1 mouse_genomes_project 6 46123080 46126627 - MGP_NODShiLtJ_P0076882 Tcaf3 protein_coding protein_coding MGP_NODShiLtJ_T0005011.1 MGP_NODShiLtJ_G0004271.1 mouse_genomes_project 6 128514988 128566100 + Gm15083 antisense antisense MGP_NODShiLtJ_T0079913.1 MGP_NODShiLtJ_G0031113.1 mouse_genomes_project 6 142832492 142855261 + MGP_NODShiLtJ_P0079913 Akap3 protein_coding protein_coding MGP_NODShiLtJ_T0079914.1 MGP_NODShiLtJ_G0031113.1 mouse_genomes_project 6 142832538 142855258 + MGP_NODShiLtJ_P0079914 Akap3 protein_coding protein_coding MGP_NODShiLtJ_T0079915.1 MGP_NODShiLtJ_G0031113.1 mouse_genomes_project 6 142832554 142855261 + MGP_NODShiLtJ_P0079915 Akap3 protein_coding protein_coding MGP_NODShiLtJ_T0079332.1 MGP_NODShiLtJ_G0030997.1 mouse_genomes_project 6 134204730 134220376 - MGP_NODShiLtJ_P0079332 Lrtm2 protein_coding protein_coding MGP_NODShiLtJ_T0079333.1 MGP_NODShiLtJ_G0030997.1 mouse_genomes_project 6 134204730 134218815 - MGP_NODShiLtJ_P0079333 Lrtm2 protein_coding protein_coding MGP_NODShiLtJ_T0079334.1 MGP_NODShiLtJ_G0030997.1 mouse_genomes_project 6 134204730 134220367 - MGP_NODShiLtJ_P0079334 Lrtm2 protein_coding protein_coding MGP_NODShiLtJ_T0079335.1 MGP_NODShiLtJ_G0030997.1 mouse_genomes_project 6 134213261 134218815 - MGP_NODShiLtJ_P0079335 Lrtm2 protein_coding protein_coding MGP_NODShiLtJ_T0001947.1 MGP_NODShiLtJ_G0001859.1 mouse_genomes_project 6 60070508 60070920 + TEC TEC MGP_NODShiLtJ_T0008551.1 MGP_NODShiLtJ_G0006905.1 mouse_genomes_project 6 80120283 80120933 - Gm44110 lincRNA lincRNA MGP_NODShiLtJ_T0008634.1 MGP_NODShiLtJ_G0006971.1 mouse_genomes_project 6 132273320 132278166 + Gm43983 lincRNA lincRNA MGP_NODShiLtJ_T0002138.1 MGP_NODShiLtJ_G0002050.1 mouse_genomes_project 6 166336471 166340362 - TEC TEC MGP_NODShiLtJ_T0080058.1 MGP_NODShiLtJ_G0031148.1 mouse_genomes_project 6 145412716 145422146 - MGP_NODShiLtJ_P0080058 Clec2e protein_coding protein_coding MGP_NODShiLtJ_T0076874.1 MGP_NODShiLtJ_G0030457.1 mouse_genomes_project 6 45918329 45919422 + MGP_NODShiLtJ_P0076874 Tas2r135 protein_coding protein_coding MGP_NODShiLtJ_T0075894.1 MGP_NODShiLtJ_G0030248.1 mouse_genomes_project 6 4045601 4049597 + MGP_NODShiLtJ_P0075894 Dlx6 protein_coding protein_coding MGP_NODShiLtJ_T0075895.1 MGP_NODShiLtJ_G0030248.1 mouse_genomes_project 6 4045979 4049597 + MGP_NODShiLtJ_P0075895 Dlx6 protein_coding protein_coding MGP_NODShiLtJ_T0075896.1 MGP_NODShiLtJ_G0030248.1 mouse_genomes_project 6 4046065 4047698 + Dlx6 protein_coding retained_intron MGP_NODShiLtJ_T0008584.1 MGP_NODShiLtJ_G0006932.1 mouse_genomes_project 6 99100616 99116689 - 1810020O05Rik lincRNA lincRNA MGP_NODShiLtJ_T0001968.1 MGP_NODShiLtJ_G0001880.1 mouse_genomes_project 6 81529945 81532451 - TEC TEC MGP_NODShiLtJ_T0015406.1 MGP_NODShiLtJ_G0013514.1 mouse_genomes_project 6 122990609 122991087 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078896.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127704661 127750753 + MGP_NODShiLtJ_P0078896 Mtmr14 protein_coding protein_coding MGP_NODShiLtJ_T0078897.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127704669 127740187 + MGP_NODShiLtJ_P0078897 Mtmr14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078898.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127704715 127750748 + MGP_NODShiLtJ_P0078898 Mtmr14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078899.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127706289 127726443 + MGP_NODShiLtJ_P0078899 Mtmr14 protein_coding protein_coding MGP_NODShiLtJ_T0078900.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127723510 127738902 + MGP_NODShiLtJ_P0078900 Mtmr14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078901.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127725243 127735418 + MGP_NODShiLtJ_P0078901 Mtmr14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078902.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127730009 127747315 + MGP_NODShiLtJ_P0078902 Mtmr14 protein_coding protein_coding MGP_NODShiLtJ_T0078903.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127735351 127750280 + MGP_NODShiLtJ_P0078903 Mtmr14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078904.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127735382 127750557 + MGP_NODShiLtJ_P0078904 Mtmr14 protein_coding protein_coding MGP_NODShiLtJ_T0078905.1 MGP_NODShiLtJ_G0030921.1 mouse_genomes_project 6 127738941 127750448 + MGP_NODShiLtJ_P0078905 Mtmr14 protein_coding protein_coding MGP_NODShiLtJ_T0015432.1 MGP_NODShiLtJ_G0013540.1 mouse_genomes_project 6 131336834 131337927 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008468.1 MGP_NODShiLtJ_G0006846.1 mouse_genomes_project 6 33676024 33687003 + Gm13844 lincRNA lincRNA MGP_NODShiLtJ_T0002073.1 MGP_NODShiLtJ_G0001985.1 mouse_genomes_project 6 126694760 126697283 + TEC TEC MGP_NODShiLtJ_T0008564.1 MGP_NODShiLtJ_G0006918.1 mouse_genomes_project 6 92915809 92923233 + lincRNA lincRNA MGP_NODShiLtJ_T0008566.1 MGP_NODShiLtJ_G0006918.1 mouse_genomes_project 6 92922269 92923811 + lincRNA lincRNA MGP_NODShiLtJ_T0008479.1 MGP_NODShiLtJ_G0006853.1 mouse_genomes_project 6 34463063 34464147 + Gm13850 lincRNA lincRNA MGP_NODShiLtJ_T0002065.1 MGP_NODShiLtJ_G0001977.1 mouse_genomes_project 6 114512457 114514785 + TEC TEC MGP_NODShiLtJ_T0078659.1 MGP_NODShiLtJ_G0030873.1 mouse_genomes_project 6 107064878 107069511 + MGP_NODShiLtJ_P0078659 Kbtbd8 protein_coding protein_coding MGP_NODShiLtJ_T0078660.1 MGP_NODShiLtJ_G0030873.1 mouse_genomes_project 6 107065538 107074546 + MGP_NODShiLtJ_P0078660 Kbtbd8 protein_coding protein_coding MGP_NODShiLtJ_T0078661.1 MGP_NODShiLtJ_G0030873.1 mouse_genomes_project 6 107065611 107069418 + Kbtbd8 protein_coding processed_transcript MGP_NODShiLtJ_T0076555.1 MGP_NODShiLtJ_G0030371.1 mouse_genomes_project 6 37423980 37433260 + Tmem140 protein_coding processed_transcript MGP_NODShiLtJ_T0076556.1 MGP_NODShiLtJ_G0030371.1 mouse_genomes_project 6 37423980 37436619 + MGP_NODShiLtJ_P0076556 Tmem140 protein_coding protein_coding MGP_NODShiLtJ_T0076557.1 MGP_NODShiLtJ_G0030371.1 mouse_genomes_project 6 37424096 37434286 + MGP_NODShiLtJ_P0076557 Tmem140 protein_coding protein_coding MGP_NODShiLtJ_T0076558.1 MGP_NODShiLtJ_G0030371.1 mouse_genomes_project 6 37427900 37430498 + Tmem140 protein_coding processed_transcript MGP_NODShiLtJ_T0076559.1 MGP_NODShiLtJ_G0030371.1 mouse_genomes_project 6 37427932 37434411 + MGP_NODShiLtJ_P0076559 Tmem140 protein_coding protein_coding MGP_NODShiLtJ_T0076562.1 MGP_NODShiLtJ_G0030371.1 mouse_genomes_project 6 37434386 37435228 + Tmem140 protein_coding processed_transcript MGP_NODShiLtJ_T0008605.1 MGP_NODShiLtJ_G0006947.1 mouse_genomes_project 6 106885519 106894884 + 4930511E03Rik lincRNA lincRNA MGP_NODShiLtJ_T0002052.1 MGP_NODShiLtJ_G0001964.1 mouse_genomes_project 6 111976139 111979913 - TEC TEC MGP_NODShiLtJ_T0101983.1 MGP_NODShiLtJ_G0040151.1 mouse_genomes_project 6 44833622 44867151 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0078007.1 MGP_NODShiLtJ_G0030744.1 mouse_genomes_project 6 94734116 94740786 - MGP_NODShiLtJ_P0078007 Cd207 protein_coding protein_coding MGP_NODShiLtJ_T0077284.1 MGP_NODShiLtJ_G0030564.1 mouse_genomes_project 6 59773620 59862011 + MGP_NODShiLtJ_P0077284 Wipf3 protein_coding protein_coding MGP_NODShiLtJ_T0077285.1 MGP_NODShiLtJ_G0030564.1 mouse_genomes_project 6 59773620 59862011 + MGP_NODShiLtJ_P0077285 Wipf3 protein_coding protein_coding MGP_NODShiLtJ_T0077286.1 MGP_NODShiLtJ_G0030564.1 mouse_genomes_project 6 59797654 59862014 + MGP_NODShiLtJ_P0077286 Wipf3 protein_coding protein_coding MGP_NODShiLtJ_T0077287.1 MGP_NODShiLtJ_G0030564.1 mouse_genomes_project 6 59797654 59862014 + MGP_NODShiLtJ_P0077287 Wipf3 protein_coding protein_coding MGP_NODShiLtJ_T0077288.1 MGP_NODShiLtJ_G0030564.1 mouse_genomes_project 6 59829386 59842722 + Wipf3 protein_coding processed_transcript MGP_NODShiLtJ_T0077289.1 MGP_NODShiLtJ_G0030564.1 mouse_genomes_project 6 59846153 59849789 + Wipf3 protein_coding retained_intron MGP_NODShiLtJ_T0077518.1 MGP_NODShiLtJ_G0030636.1 mouse_genomes_project 6 73298435 73371289 + MGP_NODShiLtJ_P0077518 C130060K24Rik protein_coding protein_coding MGP_NODShiLtJ_T0077519.1 MGP_NODShiLtJ_G0030636.1 mouse_genomes_project 6 73298624 73376474 + MGP_NODShiLtJ_P0077519 C130060K24Rik protein_coding protein_coding MGP_NODShiLtJ_T0077520.1 MGP_NODShiLtJ_G0030636.1 mouse_genomes_project 6 73358903 73371317 + MGP_NODShiLtJ_P0077520 C130060K24Rik protein_coding protein_coding MGP_NODShiLtJ_T0002109.1 MGP_NODShiLtJ_G0002021.1 mouse_genomes_project 6 149967723 149968034 + TEC TEC MGP_NODShiLtJ_T0002018.1 MGP_NODShiLtJ_G0001930.1 mouse_genomes_project 6 99242111 99242987 - TEC TEC MGP_NODShiLtJ_T0079760.1 MGP_NODShiLtJ_G0031085.1 mouse_genomes_project 6 140743185 140750316 - MGP_NODShiLtJ_P0079760 Cops7a protein_coding protein_coding MGP_NODShiLtJ_T0079761.1 MGP_NODShiLtJ_G0031085.1 mouse_genomes_project 6 140743588 140750226 - MGP_NODShiLtJ_P0079761 Cops7a protein_coding protein_coding MGP_NODShiLtJ_T0079762.1 MGP_NODShiLtJ_G0031085.1 mouse_genomes_project 6 140744006 140744914 - Cops7a protein_coding retained_intron MGP_NODShiLtJ_T0079763.1 MGP_NODShiLtJ_G0031085.1 mouse_genomes_project 6 140744679 140750068 - MGP_NODShiLtJ_P0079763 Cops7a protein_coding protein_coding MGP_NODShiLtJ_T0079764.1 MGP_NODShiLtJ_G0031085.1 mouse_genomes_project 6 140745930 140750186 - MGP_NODShiLtJ_P0079764 Cops7a protein_coding protein_coding MGP_NODShiLtJ_T0079765.1 MGP_NODShiLtJ_G0031085.1 mouse_genomes_project 6 140747395 140749985 - MGP_NODShiLtJ_P0079765 Cops7a protein_coding protein_coding MGP_NODShiLtJ_T0079766.1 MGP_NODShiLtJ_G0031085.1 mouse_genomes_project 6 140749331 140750290 - Cops7a protein_coding retained_intron MGP_NODShiLtJ_T0079174.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130628244 130830804 - MGP_NODShiLtJ_P0079174 Tmcc1 protein_coding protein_coding MGP_NODShiLtJ_T0079175.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130630803 130739425 - MGP_NODShiLtJ_P0079175 Tmcc1 protein_coding protein_coding MGP_NODShiLtJ_T0079176.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130630973 130769279 - MGP_NODShiLtJ_P0079176 Tmcc1 protein_coding protein_coding MGP_NODShiLtJ_T0079177.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130630976 130670559 - MGP_NODShiLtJ_P0079177 Tmcc1 protein_coding protein_coding MGP_NODShiLtJ_T0079178.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130631247 130769389 - MGP_NODShiLtJ_P0079178 Tmcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079179.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130631341 130670503 - MGP_NODShiLtJ_P0079179 Tmcc1 protein_coding protein_coding MGP_NODShiLtJ_T0079180.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130631625 130687902 - MGP_NODShiLtJ_P0079180 Tmcc1 protein_coding protein_coding MGP_NODShiLtJ_T0079181.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130657045 130768862 - MGP_NODShiLtJ_P0079181 Tmcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079182.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130667131 130671605 - Tmcc1 protein_coding retained_intron MGP_NODShiLtJ_T0079183.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130735633 130741946 - Tmcc1 protein_coding retained_intron MGP_NODShiLtJ_T0079184.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130765786 130808734 - MGP_NODShiLtJ_P0079184 Tmcc1 protein_coding protein_coding MGP_NODShiLtJ_T0079185.1 MGP_NODShiLtJ_G0030970.1 mouse_genomes_project 6 130768478 130770081 - Tmcc1 protein_coding retained_intron MGP_NODShiLtJ_T0001930.1 MGP_NODShiLtJ_G0001842.1 mouse_genomes_project 6 50595787 50601216 + TEC TEC MGP_NODShiLtJ_T0002519.1 MGP_NODShiLtJ_G0002420.1 mouse_genomes_project 6 45004147 45004197 + MGP_NODShiLtJ_P0002519 Trbj2-1 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0080324.1 MGP_NODShiLtJ_G0031244.1 mouse_genomes_project 6 154591709 154610937 - MGP_NODShiLtJ_P0080324 Arhgdib protein_coding protein_coding MGP_NODShiLtJ_T0080325.1 MGP_NODShiLtJ_G0031244.1 mouse_genomes_project 6 154591709 154611185 - MGP_NODShiLtJ_P0080325 Arhgdib protein_coding protein_coding MGP_NODShiLtJ_T0080327.1 MGP_NODShiLtJ_G0031244.1 mouse_genomes_project 6 154592055 154611321 - MGP_NODShiLtJ_P0080327 Arhgdib protein_coding protein_coding MGP_NODShiLtJ_T0080328.1 MGP_NODShiLtJ_G0031244.1 mouse_genomes_project 6 154592266 154611290 - MGP_NODShiLtJ_P0080328 Arhgdib protein_coding protein_coding MGP_NODShiLtJ_T0080329.1 MGP_NODShiLtJ_G0031244.1 mouse_genomes_project 6 154601885 154609025 - MGP_NODShiLtJ_P0080329 Arhgdib protein_coding protein_coding MGP_NODShiLtJ_T0002128.1 MGP_NODShiLtJ_G0002040.1 mouse_genomes_project 6 159781641 159785180 + TEC TEC MGP_NODShiLtJ_T0078934.1 MGP_NODShiLtJ_G0030925.1 mouse_genomes_project 6 127805784 127816536 - MGP_NODShiLtJ_P0078934 Camk1 protein_coding protein_coding MGP_NODShiLtJ_T0078935.1 MGP_NODShiLtJ_G0030925.1 mouse_genomes_project 6 127805788 127808282 - Camk1 protein_coding retained_intron MGP_NODShiLtJ_T0078936.1 MGP_NODShiLtJ_G0030925.1 mouse_genomes_project 6 127805797 127816456 - Camk1 protein_coding retained_intron MGP_NODShiLtJ_T0078937.1 MGP_NODShiLtJ_G0030925.1 mouse_genomes_project 6 127808375 127812343 - Camk1 protein_coding retained_intron MGP_NODShiLtJ_T0078938.1 MGP_NODShiLtJ_G0030925.1 mouse_genomes_project 6 127809548 127816530 - MGP_NODShiLtJ_P0078938 Camk1 protein_coding protein_coding MGP_NODShiLtJ_T0078939.1 MGP_NODShiLtJ_G0030925.1 mouse_genomes_project 6 127812328 127816515 - Camk1 protein_coding retained_intron MGP_NODShiLtJ_T0002043.1 MGP_NODShiLtJ_G0001955.1 mouse_genomes_project 6 103599917 103601170 - TEC TEC MGP_NODShiLtJ_T0076174.1 MGP_NODShiLtJ_G0030303.1 mouse_genomes_project 6 25476995 25523421 + MGP_NODShiLtJ_P0076174 Asb15 protein_coding protein_coding MGP_NODShiLtJ_T0076175.1 MGP_NODShiLtJ_G0030303.1 mouse_genomes_project 6 25508334 25525686 + MGP_NODShiLtJ_P0076175 Asb15 protein_coding protein_coding MGP_NODShiLtJ_T0079556.1 MGP_NODShiLtJ_G0031036.1 mouse_genomes_project 6 138126522 138133632 + MGP_NODShiLtJ_P0079556 Nanog protein_coding protein_coding MGP_NODShiLtJ_T0002025.1 MGP_NODShiLtJ_G0001937.1 mouse_genomes_project 6 99997174 99998169 + TEC TEC MGP_NODShiLtJ_T0102048.1 MGP_NODShiLtJ_G0040215.1 mouse_genomes_project 6 150293019 150293965 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008544.1 MGP_NODShiLtJ_G0006899.1 mouse_genomes_project 6 67705302 67709847 - Gm43893 lincRNA lincRNA MGP_NODShiLtJ_T0098494.1 MGP_NODShiLtJ_G0036889.1 mouse_genomes_project 6 44424717 44439262 + Gm37610 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0077439.1 MGP_NODShiLtJ_G0030618.1 mouse_genomes_project 6 64074216 64075271 - MGP_NODShiLtJ_P0077439 Vmn1r27 protein_coding protein_coding MGP_NODShiLtJ_T0008560.1 MGP_NODShiLtJ_G0006914.1 mouse_genomes_project 6 85675259 85683503 - Gm44113 lincRNA lincRNA MGP_NODShiLtJ_T0015326.1 MGP_NODShiLtJ_G0013434.1 mouse_genomes_project 6 88635822 88636794 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008646.1 MGP_NODShiLtJ_G0006981.1 mouse_genomes_project 6 136372329 136389795 - Gm44148 lincRNA lincRNA MGP_NODShiLtJ_T0079948.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143487412 143519544 + MGP_NODShiLtJ_P0079948 Parp11 protein_coding protein_coding MGP_NODShiLtJ_T0079949.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143491770 143511673 + Parp11 protein_coding retained_intron MGP_NODShiLtJ_T0079950.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143491798 143519495 + MGP_NODShiLtJ_P0079950 Parp11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079951.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143491815 143538178 + MGP_NODShiLtJ_P0079951 Parp11 protein_coding protein_coding MGP_NODShiLtJ_T0079952.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143491816 143510571 + Parp11 protein_coding retained_intron MGP_NODShiLtJ_T0079953.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143491825 143520466 + MGP_NODShiLtJ_P0079953 Parp11 protein_coding protein_coding MGP_NODShiLtJ_T0079954.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143511171 143512929 + Parp11 protein_coding retained_intron MGP_NODShiLtJ_T0079955.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143515526 143520357 + Parp11 protein_coding retained_intron MGP_NODShiLtJ_T0079956.1 MGP_NODShiLtJ_G0031121.1 mouse_genomes_project 6 143519065 143533996 + Parp11 protein_coding retained_intron MGP_NODShiLtJ_T0015163.1 MGP_NODShiLtJ_G0013271.1 mouse_genomes_project 6 26096623 26097419 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077302.1 MGP_NODShiLtJ_G0030567.1 mouse_genomes_project 6 59963871 60017110 + MGP_NODShiLtJ_P0077302 Plekha8 protein_coding protein_coding MGP_NODShiLtJ_T0100651.1 MGP_NODShiLtJ_G0039045.1 mouse_genomes_project 6 5827269 5827390 - Gm26075 snoRNA snoRNA MGP_NODShiLtJ_T0015375.1 MGP_NODShiLtJ_G0013483.1 mouse_genomes_project 6 107204928 107209134 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077351.1 MGP_NODShiLtJ_G0030581.1 mouse_genomes_project 6 61498221 61514744 + MGP_NODShiLtJ_P0077351 Ppp1r17 protein_coding protein_coding MGP_NODShiLtJ_T0080116.1 MGP_NODShiLtJ_G0031165.1 mouse_genomes_project 6 146137651 146161675 - MGP_NODShiLtJ_P0080116 Klri1 protein_coding protein_coding MGP_NODShiLtJ_T0078344.1 MGP_NODShiLtJ_G0030808.1 mouse_genomes_project 6 99354738 99378130 + MGP_NODShiLtJ_P0078344 Hmces protein_coding protein_coding MGP_NODShiLtJ_T0078345.1 MGP_NODShiLtJ_G0030808.1 mouse_genomes_project 6 99354753 99374556 + Hmces protein_coding processed_transcript MGP_NODShiLtJ_T0078346.1 MGP_NODShiLtJ_G0030808.1 mouse_genomes_project 6 99354761 99355807 + Hmces protein_coding processed_transcript MGP_NODShiLtJ_T0078347.1 MGP_NODShiLtJ_G0030808.1 mouse_genomes_project 6 99354782 99362355 + MGP_NODShiLtJ_P0078347 Hmces protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078348.1 MGP_NODShiLtJ_G0030808.1 mouse_genomes_project 6 99355109 99378130 + MGP_NODShiLtJ_P0078348 Hmces protein_coding protein_coding MGP_NODShiLtJ_T0078349.1 MGP_NODShiLtJ_G0030808.1 mouse_genomes_project 6 99358727 99374933 + Hmces protein_coding processed_transcript MGP_NODShiLtJ_T0078350.1 MGP_NODShiLtJ_G0030808.1 mouse_genomes_project 6 99374500 99378030 + Hmces protein_coding retained_intron MGP_NODShiLtJ_T0077424.1 MGP_NODShiLtJ_G0030609.1 mouse_genomes_project 6 63432037 63534463 - MGP_NODShiLtJ_P0077424 Vopp1 protein_coding protein_coding MGP_NODShiLtJ_T0077425.1 MGP_NODShiLtJ_G0030609.1 mouse_genomes_project 6 63459697 63534467 - MGP_NODShiLtJ_P0077425 Vopp1 protein_coding protein_coding MGP_NODShiLtJ_T0077426.1 MGP_NODShiLtJ_G0030609.1 mouse_genomes_project 6 63462004 63534477 - MGP_NODShiLtJ_P0077426 Vopp1 protein_coding protein_coding MGP_NODShiLtJ_T0077427.1 MGP_NODShiLtJ_G0030609.1 mouse_genomes_project 6 63466946 63534481 - MGP_NODShiLtJ_P0077427 Vopp1 protein_coding protein_coding MGP_NODShiLtJ_T0077428.1 MGP_NODShiLtJ_G0030609.1 mouse_genomes_project 6 63471166 63533967 - Vopp1 protein_coding processed_transcript MGP_NODShiLtJ_T0076268.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31481874 31511358 + MGP_NODShiLtJ_P0076268 Calu protein_coding protein_coding MGP_NODShiLtJ_T0076269.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31481874 31511358 + MGP_NODShiLtJ_P0076269 Calu protein_coding protein_coding MGP_NODShiLtJ_T0076270.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31481911 31513530 + MGP_NODShiLtJ_P0076270 Calu protein_coding protein_coding MGP_NODShiLtJ_T0076271.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31481924 31512984 + MGP_NODShiLtJ_P0076271 Calu protein_coding protein_coding MGP_NODShiLtJ_T0076272.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31481931 31513531 + MGP_NODShiLtJ_P0076272 Calu protein_coding protein_coding MGP_NODShiLtJ_T0076273.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31491286 31511880 + MGP_NODShiLtJ_P0076273 Calu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076274.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31496277 31510197 + MGP_NODShiLtJ_P0076274 Calu protein_coding protein_coding MGP_NODShiLtJ_T0076275.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31509401 31513965 + MGP_NODShiLtJ_P0076275 Calu protein_coding protein_coding MGP_NODShiLtJ_T0076276.1 MGP_NODShiLtJ_G0030328.1 mouse_genomes_project 6 31510510 31511886 + Calu protein_coding processed_transcript MGP_NODShiLtJ_T0015262.1 MGP_NODShiLtJ_G0013370.1 mouse_genomes_project 6 70499805 70500496 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010666.1 MGP_NODShiLtJ_G0008799.1 mouse_genomes_project 6 60970884 60970994 + Gm44352 miRNA miRNA MGP_NODShiLtJ_T0000285.1 MGP_NODShiLtJ_G0000223.1 mouse_genomes_project 6 76445983 76446449 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0075861.1 MGP_NODShiLtJ_G0030240.1 mouse_genomes_project 6 2183286 2209222 - MGP_NODShiLtJ_P0075861 Pon1 protein_coding protein_coding MGP_NODShiLtJ_T0075862.1 MGP_NODShiLtJ_G0030240.1 mouse_genomes_project 6 2183691 2209060 - MGP_NODShiLtJ_P0075862 Pon1 protein_coding protein_coding MGP_NODShiLtJ_T0075863.1 MGP_NODShiLtJ_G0030240.1 mouse_genomes_project 6 2186907 2209060 - MGP_NODShiLtJ_P0075863 Pon1 protein_coding protein_coding MGP_NODShiLtJ_T0075864.1 MGP_NODShiLtJ_G0030240.1 mouse_genomes_project 6 2200829 2209039 - Pon1 protein_coding retained_intron MGP_NODShiLtJ_T0005019.1 MGP_NODShiLtJ_G0004279.1 mouse_genomes_project 6 136337729 136341241 - Gm15856 antisense antisense MGP_NODShiLtJ_T0000196.1 MGP_NODShiLtJ_G0000143.1 mouse_genomes_project 6 78542954 78543241 - MGP_NODShiLtJ_P0000196 Igkv5-39 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000197.1 MGP_NODShiLtJ_G0000143.1 mouse_genomes_project 6 78542954 78543508 - MGP_NODShiLtJ_P0000197 Igkv5-39 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0015256.1 MGP_NODShiLtJ_G0013364.1 mouse_genomes_project 6 68113955 68114379 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015236.1 MGP_NODShiLtJ_G0013344.1 mouse_genomes_project 6 58115555 58116148 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080052.1 MGP_NODShiLtJ_G0031147.1 mouse_genomes_project 6 145351493 145363795 + MGP_NODShiLtJ_P0080052 Klrb1f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080053.1 MGP_NODShiLtJ_G0031147.1 mouse_genomes_project 6 145351493 145363795 + MGP_NODShiLtJ_P0080053 Klrb1f protein_coding protein_coding MGP_NODShiLtJ_T0080054.1 MGP_NODShiLtJ_G0031147.1 mouse_genomes_project 6 145351512 145363080 + MGP_NODShiLtJ_P0080054 Klrb1f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080055.1 MGP_NODShiLtJ_G0031147.1 mouse_genomes_project 6 145351517 145359059 + Klrb1f protein_coding retained_intron MGP_NODShiLtJ_T0080056.1 MGP_NODShiLtJ_G0031147.1 mouse_genomes_project 6 145351519 145360132 + MGP_NODShiLtJ_P0080056 Klrb1f protein_coding protein_coding MGP_NODShiLtJ_T0080057.1 MGP_NODShiLtJ_G0031147.1 mouse_genomes_project 6 145354928 145360138 + Klrb1f protein_coding processed_transcript MGP_NODShiLtJ_T0076258.1 MGP_NODShiLtJ_G0030325.1 mouse_genomes_project 6 31400392 31403091 + MGP_NODShiLtJ_P0076258 Hilpda protein_coding protein_coding MGP_NODShiLtJ_T0076259.1 MGP_NODShiLtJ_G0030325.1 mouse_genomes_project 6 31400530 31403351 + MGP_NODShiLtJ_P0076259 Hilpda protein_coding protein_coding MGP_NODShiLtJ_T0011549.1 MGP_NODShiLtJ_G0009682.1 mouse_genomes_project 6 94773725 94773919 + Gm27893 misc_RNA misc_RNA MGP_NODShiLtJ_T0077636.1 MGP_NODShiLtJ_G0030670.1 mouse_genomes_project 6 80544517 80656325 + MGP_NODShiLtJ_P0077636 Reep1 protein_coding protein_coding MGP_NODShiLtJ_T0076313.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31687549 31760799 - MGP_NODShiLtJ_P0076313 Tnpo3 protein_coding protein_coding MGP_NODShiLtJ_T0076314.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31687549 31761079 - MGP_NODShiLtJ_P0076314 Tnpo3 protein_coding protein_coding MGP_NODShiLtJ_T0076315.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31688346 31707442 - MGP_NODShiLtJ_P0076315 Tnpo3 protein_coding protein_coding MGP_NODShiLtJ_T0076317.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31688934 31761003 - MGP_NODShiLtJ_P0076317 Tnpo3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076318.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31702230 31704413 - Tnpo3 protein_coding retained_intron MGP_NODShiLtJ_T0076319.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31712224 31760815 - Tnpo3 protein_coding retained_intron MGP_NODShiLtJ_T0076320.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31715773 31718859 - Tnpo3 protein_coding retained_intron MGP_NODShiLtJ_T0076321.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31727391 31731214 - Tnpo3 protein_coding retained_intron MGP_NODShiLtJ_T0076322.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31728892 31761011 - Tnpo3 protein_coding retained_intron MGP_NODShiLtJ_T0076323.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31732170 31760826 - Tnpo3 protein_coding retained_intron MGP_NODShiLtJ_T0076324.1 MGP_NODShiLtJ_G0030336.1 mouse_genomes_project 6 31738742 31760805 - Tnpo3 protein_coding processed_transcript MGP_NODShiLtJ_T0002026.1 MGP_NODShiLtJ_G0001938.1 mouse_genomes_project 6 100217266 100220437 + TEC TEC MGP_NODShiLtJ_T0015407.1 MGP_NODShiLtJ_G0013515.1 mouse_genomes_project 6 123074316 123074901 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079565.1 MGP_NODShiLtJ_G0031038.1 mouse_genomes_project 6 138259314 138284596 + MGP_NODShiLtJ_P0079565 Foxj2 protein_coding protein_coding MGP_NODShiLtJ_T0079566.1 MGP_NODShiLtJ_G0031038.1 mouse_genomes_project 6 138259911 138284571 + MGP_NODShiLtJ_P0079566 Foxj2 protein_coding protein_coding MGP_NODShiLtJ_T0079567.1 MGP_NODShiLtJ_G0031038.1 mouse_genomes_project 6 138266095 138272687 + MGP_NODShiLtJ_P0079567 Foxj2 protein_coding protein_coding MGP_NODShiLtJ_T0004909.1 MGP_NODShiLtJ_G0004207.1 mouse_genomes_project 6 60722050 60733646 - Gm44073 antisense antisense MGP_NODShiLtJ_T0000291.1 MGP_NODShiLtJ_G0000229.1 mouse_genomes_project 6 76755121 76755590 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0015468.1 MGP_NODShiLtJ_G0013576.1 mouse_genomes_project 6 142914483 142915383 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097820.1 MGP_NODShiLtJ_G0036232.1 mouse_genomes_project 6 57436370 57436817 - pseudogene pseudogene MGP_NODShiLtJ_T0099435.1 MGP_NODShiLtJ_G0037829.1 mouse_genomes_project 6 79797124 79797279 - Gm23485 snRNA snRNA MGP_NODShiLtJ_T0102013.1 MGP_NODShiLtJ_G0040181.1 mouse_genomes_project 6 82409923 82410828 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0080175.1 MGP_NODShiLtJ_G0031201.1 mouse_genomes_project 6 149949274 149950276 + MGP_NODShiLtJ_P0080175 Tas2r123 protein_coding protein_coding MGP_NODShiLtJ_T0078783.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119101105 119327107 + Cntn4 protein_coding processed_transcript MGP_NODShiLtJ_T0078784.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119101190 120337673 + MGP_NODShiLtJ_P0078784 Cntn4 protein_coding protein_coding MGP_NODShiLtJ_T0078785.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119101190 120363152 + MGP_NODShiLtJ_P0078785 Cntn4 protein_coding protein_coding MGP_NODShiLtJ_T0078786.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119101220 120363157 + MGP_NODShiLtJ_P0078786 Cntn4 protein_coding protein_coding MGP_NODShiLtJ_T0078787.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119438295 120337679 + MGP_NODShiLtJ_P0078787 Cntn4 protein_coding protein_coding MGP_NODShiLtJ_T0078788.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119697800 120277518 + MGP_NODShiLtJ_P0078788 Cntn4 protein_coding protein_coding MGP_NODShiLtJ_T0078789.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119697953 120180835 + Cntn4 protein_coding processed_transcript MGP_NODShiLtJ_T0078790.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119698041 120336896 + MGP_NODShiLtJ_P0078790 Cntn4 protein_coding protein_coding MGP_NODShiLtJ_T0078791.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 119698090 119969582 + Cntn4 protein_coding processed_transcript MGP_NODShiLtJ_T0078792.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 120168709 120361603 + Cntn4 protein_coding processed_transcript MGP_NODShiLtJ_T0078793.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 120319127 120363039 + Cntn4 protein_coding processed_transcript MGP_NODShiLtJ_T0078794.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 120342654 120343627 + Cntn4 protein_coding retained_intron MGP_NODShiLtJ_T0078795.1 MGP_NODShiLtJ_G0030900.1 mouse_genomes_project 6 120357123 120361747 + Cntn4 protein_coding processed_transcript MGP_NODShiLtJ_T0004945.1 MGP_NODShiLtJ_G0004230.1 mouse_genomes_project 6 95118291 95121519 - Gm43918 antisense antisense MGP_NODShiLtJ_T0011512.1 MGP_NODShiLtJ_G0009645.1 mouse_genomes_project 6 5760442 5760754 + Gm24059 misc_RNA misc_RNA MGP_NODShiLtJ_T0015544.1 MGP_NODShiLtJ_G0013652.1 mouse_genomes_project 6 167976251 167976574 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080118.1 MGP_NODShiLtJ_G0031167.1 mouse_genomes_project 6 146226364 146240118 - MGP_NODShiLtJ_P0080118 Gm156 protein_coding protein_coding MGP_NODShiLtJ_T0080119.1 MGP_NODShiLtJ_G0031167.1 mouse_genomes_project 6 146227162 146235049 - MGP_NODShiLtJ_P0080119 Gm156 protein_coding protein_coding MGP_NODShiLtJ_T0005057.1 MGP_NODShiLtJ_G0004311.1 mouse_genomes_project 6 156488161 156508501 + B230110G15Rik antisense antisense MGP_NODShiLtJ_T0004861.1 MGP_NODShiLtJ_G0004170.1 mouse_genomes_project 6 31652546 31654520 + Gm26627 antisense antisense MGP_NODShiLtJ_T0002097.1 MGP_NODShiLtJ_G0002009.1 mouse_genomes_project 6 143340385 143340755 - TEC TEC MGP_NODShiLtJ_T0011540.1 MGP_NODShiLtJ_G0009673.1 mouse_genomes_project 6 57455567 57455744 + Gm27543 misc_RNA misc_RNA MGP_NODShiLtJ_T0015299.1 MGP_NODShiLtJ_G0013407.1 mouse_genomes_project 6 75983113 75984466 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008625.1 MGP_NODShiLtJ_G0006962.1 mouse_genomes_project 6 121333362 121338135 + 4933431M02Rik lincRNA lincRNA MGP_NODShiLtJ_T0010647.1 MGP_NODShiLtJ_G0008780.1 mouse_genomes_project 6 31533512 31533601 + Gm26220 miRNA miRNA MGP_NODShiLtJ_T0099431.1 MGP_NODShiLtJ_G0037825.1 mouse_genomes_project 6 72239445 72239548 + Gm25205 snRNA snRNA MGP_NODShiLtJ_T0102006.1 MGP_NODShiLtJ_G0040174.1 mouse_genomes_project 6 64443996 64444921 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0078980.1 MGP_NODShiLtJ_G0030933.1 mouse_genomes_project 6 127955777 127967459 + MGP_NODShiLtJ_P0078980 Il17rc protein_coding protein_coding MGP_NODShiLtJ_T0078981.1 MGP_NODShiLtJ_G0030933.1 mouse_genomes_project 6 127956633 127960759 + MGP_NODShiLtJ_P0078981 Il17rc protein_coding protein_coding MGP_NODShiLtJ_T0078982.1 MGP_NODShiLtJ_G0030933.1 mouse_genomes_project 6 127957144 127967459 + MGP_NODShiLtJ_P0078982 Il17rc protein_coding protein_coding MGP_NODShiLtJ_T0078983.1 MGP_NODShiLtJ_G0030933.1 mouse_genomes_project 6 127958575 127961065 + MGP_NODShiLtJ_P0078983 Il17rc protein_coding protein_coding MGP_NODShiLtJ_T0078984.1 MGP_NODShiLtJ_G0030933.1 mouse_genomes_project 6 127960908 127963622 + Il17rc protein_coding retained_intron MGP_NODShiLtJ_T0076876.1 MGP_NODShiLtJ_G0030459.1 mouse_genomes_project 6 45978156 45979098 - MGP_NODShiLtJ_P0076876 Olfr458 protein_coding protein_coding MGP_NODShiLtJ_T0078219.1 MGP_NODShiLtJ_G0030781.1 mouse_genomes_project 6 97766204 97785771 + MGP_NODShiLtJ_P0078219 Gm44790 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077815.1 MGP_NODShiLtJ_G0030707.1 mouse_genomes_project 6 90356514 90356963 + MGP_NODShiLtJ_P0077815 Gm20594 protein_coding protein_coding MGP_NODShiLtJ_T0011531.1 MGP_NODShiLtJ_G0009664.1 mouse_genomes_project 6 57362357 57362482 + Gm27867 misc_RNA misc_RNA MGP_NODShiLtJ_T0079199.1 MGP_NODShiLtJ_G0030972.1 mouse_genomes_project 6 130905672 130972199 + MGP_NODShiLtJ_P0079199 Zfand4 protein_coding protein_coding MGP_NODShiLtJ_T0010645.1 MGP_NODShiLtJ_G0008778.1 mouse_genomes_project 6 29929641 29929737 - Mir592 miRNA miRNA MGP_NODShiLtJ_T0015513.1 MGP_NODShiLtJ_G0013621.1 mouse_genomes_project 6 152614395 152614769 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080665.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165545920 165555435 + Arntl2 protein_coding processed_transcript MGP_NODShiLtJ_T0080666.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165545930 165586539 + MGP_NODShiLtJ_P0080666 Arntl2 protein_coding protein_coding MGP_NODShiLtJ_T0080667.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165555386 165585530 + MGP_NODShiLtJ_P0080667 Arntl2 protein_coding protein_coding MGP_NODShiLtJ_T0080668.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165555386 165585530 + MGP_NODShiLtJ_P0080668 Arntl2 protein_coding protein_coding MGP_NODShiLtJ_T0080669.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165555386 165585530 + MGP_NODShiLtJ_P0080669 Arntl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080670.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165555386 165585530 + MGP_NODShiLtJ_P0080670 Arntl2 protein_coding protein_coding MGP_NODShiLtJ_T0080671.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165571876 165574592 + Arntl2 protein_coding retained_intron MGP_NODShiLtJ_T0080672.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165574050 165575343 + Arntl2 protein_coding retained_intron MGP_NODShiLtJ_T0080673.1 MGP_NODShiLtJ_G0031303.1 mouse_genomes_project 6 165583408 165586532 + Arntl2 protein_coding retained_intron MGP_NODShiLtJ_T0079833.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140971355 140998499 - MGP_NODShiLtJ_P0079833 Ncapd2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0079834.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140971358 140972641 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079835.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140971358 140998548 - MGP_NODShiLtJ_P0079835 Ncapd2 protein_coding protein_coding MGP_NODShiLtJ_T0079836.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140973195 140974453 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079837.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140974303 140975169 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079838.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140974414 140977278 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079839.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140975194 140977260 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079840.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140976724 140977899 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079841.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140976819 140982625 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079842.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140980247 140983277 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079843.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140983100 140985332 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079844.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140991147 140998450 - MGP_NODShiLtJ_P0079844 Ncapd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079845.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140991371 140993447 - Ncapd2 protein_coding retained_intron MGP_NODShiLtJ_T0079846.1 MGP_NODShiLtJ_G0031095.1 mouse_genomes_project 6 140992644 140998337 - MGP_NODShiLtJ_P0079846 Ncapd2 protein_coding protein_coding MGP_NODShiLtJ_T0077908.1 MGP_NODShiLtJ_G0030726.1 mouse_genomes_project 6 94121669 94129814 + MGP_NODShiLtJ_P0077908 Gm42688 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0101981.1 MGP_NODShiLtJ_G0040149.1 mouse_genomes_project 6 44356312 44356954 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0078467.1 MGP_NODShiLtJ_G0030826.1 mouse_genomes_project 6 101174994 101207942 + MGP_NODShiLtJ_P0078467 Txnrd3 protein_coding protein_coding MGP_NODShiLtJ_T0078468.1 MGP_NODShiLtJ_G0030826.1 mouse_genomes_project 6 101174994 101207942 + MGP_NODShiLtJ_P0078468 Txnrd3 protein_coding protein_coding MGP_NODShiLtJ_T0078557.1 MGP_NODShiLtJ_G0030853.1 mouse_genomes_project 6 103084605 103097950 - MGP_NODShiLtJ_P0078557 Chchd4 protein_coding protein_coding MGP_NODShiLtJ_T0078558.1 MGP_NODShiLtJ_G0030853.1 mouse_genomes_project 6 103096128 103097853 - Chchd4 protein_coding retained_intron MGP_NODShiLtJ_T0010656.1 MGP_NODShiLtJ_G0008789.1 mouse_genomes_project 6 39212032 39212116 + Mir490 miRNA miRNA MGP_NODShiLtJ_T0000293.1 MGP_NODShiLtJ_G0000231.1 mouse_genomes_project 6 76762810 76763558 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0079452.1 MGP_NODShiLtJ_G0031016.1 mouse_genomes_project 6 135994273 136019430 - MGP_NODShiLtJ_P0079452 Bid protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079453.1 MGP_NODShiLtJ_G0031016.1 mouse_genomes_project 6 135995197 136019447 - MGP_NODShiLtJ_P0079453 Bid protein_coding protein_coding MGP_NODShiLtJ_T0079454.1 MGP_NODShiLtJ_G0031016.1 mouse_genomes_project 6 135997959 135999910 - Bid protein_coding retained_intron MGP_NODShiLtJ_T0079455.1 MGP_NODShiLtJ_G0031016.1 mouse_genomes_project 6 136002564 136019392 - MGP_NODShiLtJ_P0079455 Bid protein_coding protein_coding MGP_NODShiLtJ_T0079456.1 MGP_NODShiLtJ_G0031016.1 mouse_genomes_project 6 136010249 136019397 - Bid protein_coding processed_transcript MGP_NODShiLtJ_T0015297.1 MGP_NODShiLtJ_G0013405.1 mouse_genomes_project 6 75585182 75585516 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008697.1 MGP_NODShiLtJ_G0007017.1 mouse_genomes_project 6 163994123 163999722 + 2010013B24Rik lincRNA lincRNA MGP_NODShiLtJ_T0080626.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 164816864 165240692 - MGP_NODShiLtJ_P0080626 Itpr2 protein_coding protein_coding MGP_NODShiLtJ_T0080627.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 164820046 165240426 - MGP_NODShiLtJ_P0080627 Itpr2 protein_coding protein_coding MGP_NODShiLtJ_T0080628.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 164829741 164856350 - Itpr2 protein_coding processed_transcript MGP_NODShiLtJ_T0080629.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 164889827 164945710 - MGP_NODShiLtJ_P0080629 Itpr2 protein_coding protein_coding MGP_NODShiLtJ_T0080630.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 164889902 164908310 - Itpr2 protein_coding processed_transcript MGP_NODShiLtJ_T0080631.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 164949648 164951150 - Itpr2 protein_coding retained_intron MGP_NODShiLtJ_T0080632.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 165009476 165013278 - Itpr2 protein_coding retained_intron MGP_NODShiLtJ_T0080633.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 165078748 165121814 - MGP_NODShiLtJ_P0080633 Itpr2 protein_coding protein_coding MGP_NODShiLtJ_T0080634.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 165094006 165240737 - MGP_NODShiLtJ_P0080634 Itpr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080635.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 165102044 165240692 - Itpr2 protein_coding retained_intron MGP_NODShiLtJ_T0080636.1 MGP_NODShiLtJ_G0031297.1 mouse_genomes_project 6 165148903 165240392 - Itpr2 protein_coding processed_transcript MGP_NODShiLtJ_T0015403.1 MGP_NODShiLtJ_G0013511.1 mouse_genomes_project 6 121627379 121627992 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0078946.1 MGP_NODShiLtJ_G0030927.1 mouse_genomes_project 6 127858286 127873383 + MGP_NODShiLtJ_P0078946 Arpc4 protein_coding protein_coding MGP_NODShiLtJ_T0078947.1 MGP_NODShiLtJ_G0030927.1 mouse_genomes_project 6 127858379 127871712 + MGP_NODShiLtJ_P0078947 Arpc4 protein_coding protein_coding MGP_NODShiLtJ_T0008567.1 MGP_NODShiLtJ_G0006920.1 mouse_genomes_project 6 93803841 93819445 + Gm43878 lincRNA lincRNA MGP_NODShiLtJ_T0008568.1 MGP_NODShiLtJ_G0006920.1 mouse_genomes_project 6 93813859 93819457 + Gm43878 lincRNA lincRNA MGP_NODShiLtJ_T0008569.1 MGP_NODShiLtJ_G0006920.1 mouse_genomes_project 6 93813894 93822290 + Gm43878 lincRNA lincRNA MGP_NODShiLtJ_T0015126.1 MGP_NODShiLtJ_G0013234.1 mouse_genomes_project 6 6543577 6543890 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101246.1 MGP_NODShiLtJ_G0039536.1 mouse_genomes_project 6 53404246 53430259 + transcribed_unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101247.1 MGP_NODShiLtJ_G0039536.1 mouse_genomes_project 6 53407949 53425865 + transcribed_unitary_pseudogene transcribed_unitary_pseudogene MGP_NODShiLtJ_T0101248.1 MGP_NODShiLtJ_G0039536.1 mouse_genomes_project 6 53412067 53427931 + transcribed_unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101249.1 MGP_NODShiLtJ_G0039536.1 mouse_genomes_project 6 53412124 53423939 + transcribed_unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0078178.1 MGP_NODShiLtJ_G0030777.1 mouse_genomes_project 6 97700680 97705094 + MGP_NODShiLtJ_P0078178 Fam136a protein_coding protein_coding MGP_NODShiLtJ_T0078179.1 MGP_NODShiLtJ_G0030777.1 mouse_genomes_project 6 97700748 97702054 + Fam136a protein_coding retained_intron MGP_NODShiLtJ_T0078180.1 MGP_NODShiLtJ_G0030777.1 mouse_genomes_project 6 97700758 97703834 + MGP_NODShiLtJ_P0078180 Fam136a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076209.1 MGP_NODShiLtJ_G0030315.1 mouse_genomes_project 6 30461267 30466901 - MGP_NODShiLtJ_P0076209 Gcc1 protein_coding protein_coding MGP_NODShiLtJ_T0076210.1 MGP_NODShiLtJ_G0030315.1 mouse_genomes_project 6 30463005 30474902 - MGP_NODShiLtJ_P0076210 Gcc1 protein_coding protein_coding MGP_NODShiLtJ_T0076211.1 MGP_NODShiLtJ_G0030315.1 mouse_genomes_project 6 30464838 30466035 - MGP_NODShiLtJ_P0076211 Gcc1 protein_coding protein_coding MGP_NODShiLtJ_T0076212.1 MGP_NODShiLtJ_G0030315.1 mouse_genomes_project 6 30466456 30470604 - MGP_NODShiLtJ_P0076212 Gcc1 protein_coding protein_coding MGP_NODShiLtJ_T0080123.1 MGP_NODShiLtJ_G0031170.1 mouse_genomes_project 6 146378242 146382963 - Klra5 protein_coding retained_intron MGP_NODShiLtJ_T0080124.1 MGP_NODShiLtJ_G0031170.1 mouse_genomes_project 6 146378242 146401573 - MGP_NODShiLtJ_P0080124 Klra5 protein_coding protein_coding MGP_NODShiLtJ_T0080125.1 MGP_NODShiLtJ_G0031170.1 mouse_genomes_project 6 146378242 146391474 - MGP_NODShiLtJ_P0080125 Klra5 protein_coding protein_coding MGP_NODShiLtJ_T0080127.1 MGP_NODShiLtJ_G0031170.1 mouse_genomes_project 6 146378402 146391416 - MGP_NODShiLtJ_P0080127 Klra5 protein_coding protein_coding MGP_NODShiLtJ_T0015333.1 MGP_NODShiLtJ_G0013441.1 mouse_genomes_project 6 93874954 93876148 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0075871.1 MGP_NODShiLtJ_G0030242.1 mouse_genomes_project 6 2299875 2335605 - MGP_NODShiLtJ_P0075871 Pon2 protein_coding protein_coding MGP_NODShiLtJ_T0075872.1 MGP_NODShiLtJ_G0030242.1 mouse_genomes_project 6 2305881 2335480 - Pon2 protein_coding retained_intron MGP_NODShiLtJ_T0075873.1 MGP_NODShiLtJ_G0030242.1 mouse_genomes_project 6 2308833 2324756 - Pon2 protein_coding processed_transcript MGP_NODShiLtJ_T0075874.1 MGP_NODShiLtJ_G0030242.1 mouse_genomes_project 6 2313230 2316068 - Pon2 protein_coding retained_intron MGP_NODShiLtJ_T0004993.1 MGP_NODShiLtJ_G0004259.1 mouse_genomes_project 6 114924696 114969448 + Gm44188 antisense antisense MGP_NODShiLtJ_T0004994.1 MGP_NODShiLtJ_G0004259.1 mouse_genomes_project 6 114924718 115002145 + Gm44188 antisense antisense MGP_NODShiLtJ_T0075936.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 5973661 6126835 - MGP_NODShiLtJ_P0075936 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0075937.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 5973661 6127120 - MGP_NODShiLtJ_P0075937 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0075938.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 5973661 6127165 - MGP_NODShiLtJ_P0075938 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0075939.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 5973661 6107459 - MGP_NODShiLtJ_P0075939 Ica1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075940.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 5973833 5993599 - Ica1 protein_coding processed_transcript MGP_NODShiLtJ_T0075941.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 6003988 6126835 - MGP_NODShiLtJ_P0075941 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0075942.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 6004715 6018865 - MGP_NODShiLtJ_P0075942 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0075943.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 6004725 6127168 - MGP_NODShiLtJ_P0075943 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0075944.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 6004726 6084625 - MGP_NODShiLtJ_P0075944 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0075945.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 6076426 6127169 - Ica1 protein_coding processed_transcript MGP_NODShiLtJ_T0075946.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 6098777 6119231 - MGP_NODShiLtJ_P0075946 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0075947.1 MGP_NODShiLtJ_G0030260.1 mouse_genomes_project 6 6103692 6126804 - MGP_NODShiLtJ_P0075947 Ica1 protein_coding protein_coding MGP_NODShiLtJ_T0005026.1 MGP_NODShiLtJ_G0004286.1 mouse_genomes_project 6 140796895 140844384 - Gm43989 antisense antisense MGP_NODShiLtJ_T0015466.1 MGP_NODShiLtJ_G0013574.1 mouse_genomes_project 6 141610557 141610947 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008461.1 MGP_NODShiLtJ_G0006842.1 mouse_genomes_project 6 33385667 33515441 - Lncpint lincRNA lincRNA MGP_NODShiLtJ_T0008463.1 MGP_NODShiLtJ_G0006842.1 mouse_genomes_project 6 33460008 33515400 - Lncpint lincRNA lincRNA MGP_NODShiLtJ_T0008464.1 MGP_NODShiLtJ_G0006842.1 mouse_genomes_project 6 33460961 33515387 - Lncpint lincRNA lincRNA MGP_NODShiLtJ_T0008465.1 MGP_NODShiLtJ_G0006842.1 mouse_genomes_project 6 33461009 33515313 - Lncpint lincRNA lincRNA MGP_NODShiLtJ_T0008552.1 MGP_NODShiLtJ_G0006906.1 mouse_genomes_project 6 80136482 80157041 + Gm44174 lincRNA lincRNA MGP_NODShiLtJ_T0004975.1 MGP_NODShiLtJ_G0004248.1 mouse_genomes_project 6 100838672 100861824 + Gm26811 antisense antisense MGP_NODShiLtJ_T0008546.1 MGP_NODShiLtJ_G0006901.1 mouse_genomes_project 6 74489253 74497995 - lincRNA lincRNA MGP_NODShiLtJ_T0008547.1 MGP_NODShiLtJ_G0006901.1 mouse_genomes_project 6 74491498 74498034 - lincRNA lincRNA MGP_NODShiLtJ_T0001961.1 MGP_NODShiLtJ_G0001873.1 mouse_genomes_project 6 80277844 80280755 - TEC TEC MGP_NODShiLtJ_T0000308.1 MGP_NODShiLtJ_G0000246.1 mouse_genomes_project 6 77987622 77988149 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0015135.1 MGP_NODShiLtJ_G0013243.1 mouse_genomes_project 6 11958855 11959351 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100714.1 MGP_NODShiLtJ_G0039108.1 mouse_genomes_project 6 139767523 139767633 + Gm23554 snoRNA snoRNA MGP_NODShiLtJ_T0076377.1 MGP_NODShiLtJ_G0030342.1 mouse_genomes_project 6 32432279 32536451 - MGP_NODShiLtJ_P0076377 Ube2h protein_coding protein_coding MGP_NODShiLtJ_T0076378.1 MGP_NODShiLtJ_G0030342.1 mouse_genomes_project 6 32435889 32471826 - Ube2h protein_coding processed_transcript MGP_NODShiLtJ_T0076379.1 MGP_NODShiLtJ_G0030342.1 mouse_genomes_project 6 32435941 32536434 - MGP_NODShiLtJ_P0076379 Ube2h protein_coding protein_coding MGP_NODShiLtJ_T0076380.1 MGP_NODShiLtJ_G0030342.1 mouse_genomes_project 6 32444523 32536440 - Ube2h protein_coding processed_transcript MGP_NODShiLtJ_T0008539.1 MGP_NODShiLtJ_G0006894.1 mouse_genomes_project 6 62996734 64522585 - lincRNA lincRNA MGP_NODShiLtJ_T0080457.1 MGP_NODShiLtJ_G0031265.1 mouse_genomes_project 6 159997892 160074307 + MGP_NODShiLtJ_P0080457 Slco1b2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080458.1 MGP_NODShiLtJ_G0031265.1 mouse_genomes_project 6 160008970 160074307 + MGP_NODShiLtJ_P0080458 Slco1b2 protein_coding protein_coding MGP_NODShiLtJ_T0080459.1 MGP_NODShiLtJ_G0031265.1 mouse_genomes_project 6 160036624 160042716 + Slco1b2 protein_coding retained_intron MGP_NODShiLtJ_T0080460.1 MGP_NODShiLtJ_G0031265.1 mouse_genomes_project 6 160068921 160074310 + Slco1b2 protein_coding retained_intron MGP_NODShiLtJ_T0080511.1 MGP_NODShiLtJ_G0031279.1 mouse_genomes_project 6 161056309 161063111 - MGP_NODShiLtJ_P0080511 Kcnj8 protein_coding protein_coding MGP_NODShiLtJ_T0080512.1 MGP_NODShiLtJ_G0031279.1 mouse_genomes_project 6 161056311 161062868 - MGP_NODShiLtJ_P0080512 Kcnj8 protein_coding protein_coding MGP_NODShiLtJ_T0000164.1 MGP_NODShiLtJ_G0000120.1 mouse_genomes_project 6 76364982 76365750 + MGP_NODShiLtJ_P0000164 Igkv1-122 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0099439.1 MGP_NODShiLtJ_G0037833.1 mouse_genomes_project 6 94784296 94784393 + Gm25054 snRNA snRNA MGP_NODShiLtJ_T0078471.1 MGP_NODShiLtJ_G0030829.1 mouse_genomes_project 6 101374924 101376022 - MGP_NODShiLtJ_P0078471 Vmn1r42 protein_coding protein_coding MGP_NODShiLtJ_T0005061.1 MGP_NODShiLtJ_G0004315.1 mouse_genomes_project 6 162618500 162620371 + Sox5os1 antisense antisense MGP_NODShiLtJ_T0076477.1 MGP_NODShiLtJ_G0030359.1 mouse_genomes_project 6 34495458 34948635 - MGP_NODShiLtJ_P0076477 Plxna4 protein_coding protein_coding MGP_NODShiLtJ_T0076478.1 MGP_NODShiLtJ_G0030359.1 mouse_genomes_project 6 34576644 34578071 - Plxna4 protein_coding retained_intron MGP_NODShiLtJ_T0077249.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592748 58702718 + 9430076C15Rik protein_coding retained_intron MGP_NODShiLtJ_T0077250.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592748 59011511 + MGP_NODShiLtJ_P0077250 9430076C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0077251.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592764 58706881 + 9430076C15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0077252.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592773 58709394 + 9430076C15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0077253.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592796 58594204 + 9430076C15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0077254.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592796 58957264 + 9430076C15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0077255.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592796 58700127 + 9430076C15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0077256.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592796 58920373 + 9430076C15Rik protein_coding retained_intron MGP_NODShiLtJ_T0077257.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58592799 58723056 + 9430076C15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0077258.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58595919 59005311 + MGP_NODShiLtJ_P0077258 9430076C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0077259.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58617121 59005311 + MGP_NODShiLtJ_P0077259 9430076C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0077260.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58881561 59011502 + MGP_NODShiLtJ_P0077260 9430076C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0077261.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58881636 58921869 + 9430076C15Rik protein_coding retained_intron MGP_NODShiLtJ_T0077262.1 MGP_NODShiLtJ_G0030559.1 mouse_genomes_project 6 58881637 58918719 + MGP_NODShiLtJ_P0077262 9430076C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0005066.1 MGP_NODShiLtJ_G0004319.1 mouse_genomes_project 6 163385815 163387157 + Sox5os5 antisense antisense MGP_NODShiLtJ_T0102040.1 MGP_NODShiLtJ_G0040207.1 mouse_genomes_project 6 149784118 149784485 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0001981.1 MGP_NODShiLtJ_G0001893.1 mouse_genomes_project 6 87602766 87606002 - TEC TEC MGP_NODShiLtJ_T0077379.1 MGP_NODShiLtJ_G0030586.1 mouse_genomes_project 6 62383336 62433495 + MGP_NODShiLtJ_P0077379 Fkbp9 protein_coding protein_coding MGP_NODShiLtJ_T0077380.1 MGP_NODShiLtJ_G0030586.1 mouse_genomes_project 6 62401635 62402963 + Fkbp9 protein_coding retained_intron MGP_NODShiLtJ_T0080179.1 MGP_NODShiLtJ_G0031205.1 mouse_genomes_project 6 150057073 150058010 + MGP_NODShiLtJ_P0080179 Tas2r125 protein_coding protein_coding MGP_NODShiLtJ_T0002059.1 MGP_NODShiLtJ_G0001971.1 mouse_genomes_project 6 113622947 113625807 + TEC TEC MGP_NODShiLtJ_T0076489.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 35652713 36471309 + MGP_NODShiLtJ_P0076489 Exoc4 protein_coding protein_coding MGP_NODShiLtJ_T0076490.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 35652756 35771141 + Exoc4 protein_coding retained_intron MGP_NODShiLtJ_T0076491.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 35652756 36301572 + Exoc4 protein_coding processed_transcript MGP_NODShiLtJ_T0076492.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 35652756 35926918 + MGP_NODShiLtJ_P0076492 Exoc4 protein_coding protein_coding MGP_NODShiLtJ_T0076493.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 35652760 36036975 + MGP_NODShiLtJ_P0076493 Exoc4 protein_coding protein_coding MGP_NODShiLtJ_T0076494.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 35652764 35731806 + Exoc4 protein_coding processed_transcript MGP_NODShiLtJ_T0076495.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 35748950 35956770 + Exoc4 protein_coding processed_transcript MGP_NODShiLtJ_T0076496.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 35750012 35767261 + Exoc4 protein_coding retained_intron MGP_NODShiLtJ_T0076497.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 36168464 36352888 + Exoc4 protein_coding processed_transcript MGP_NODShiLtJ_T0076498.1 MGP_NODShiLtJ_G0030361.1 mouse_genomes_project 6 36352827 36366926 + Exoc4 protein_coding processed_transcript MGP_NODShiLtJ_T0002017.1 MGP_NODShiLtJ_G0001929.1 mouse_genomes_project 6 99232858 99236014 - TEC TEC MGP_NODShiLtJ_T0078454.1 MGP_NODShiLtJ_G0030823.1 mouse_genomes_project 6 100454114 100621336 + MGP_NODShiLtJ_P0078454 protein_coding protein_coding MGP_NODShiLtJ_T0078455.1 MGP_NODShiLtJ_G0030823.1 mouse_genomes_project 6 100605863 100619198 + protein_coding lincRNA MGP_NODShiLtJ_T0078456.1 MGP_NODShiLtJ_G0030823.1 mouse_genomes_project 6 100605863 100621337 + protein_coding lincRNA MGP_NODShiLtJ_T0078457.1 MGP_NODShiLtJ_G0030823.1 mouse_genomes_project 6 100610880 100619518 + protein_coding lincRNA MGP_NODShiLtJ_T0079544.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137965914 138004366 - MGP_NODShiLtJ_P0079544 Apobec1 protein_coding protein_coding MGP_NODShiLtJ_T0079545.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137965921 137991616 - MGP_NODShiLtJ_P0079545 Apobec1 protein_coding protein_coding MGP_NODShiLtJ_T0079546.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137965923 138004293 - MGP_NODShiLtJ_P0079546 Apobec1 protein_coding protein_coding MGP_NODShiLtJ_T0079547.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137970552 138004309 - MGP_NODShiLtJ_P0079547 Apobec1 protein_coding protein_coding MGP_NODShiLtJ_T0079548.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137970578 137991847 - MGP_NODShiLtJ_P0079548 Apobec1 protein_coding protein_coding MGP_NODShiLtJ_T0079549.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137970760 138004251 - MGP_NODShiLtJ_P0079549 Apobec1 protein_coding protein_coding MGP_NODShiLtJ_T0079550.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137978903 138004292 - MGP_NODShiLtJ_P0079550 Apobec1 protein_coding protein_coding MGP_NODShiLtJ_T0079551.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137979636 138004286 - Apobec1 protein_coding retained_intron MGP_NODShiLtJ_T0079552.1 MGP_NODShiLtJ_G0031033.1 mouse_genomes_project 6 137988106 137991927 - Apobec1 protein_coding retained_intron MGP_NODShiLtJ_T0005014.1 MGP_NODShiLtJ_G0004274.1 mouse_genomes_project 6 130739215 130761681 + Gm20404 antisense antisense MGP_NODShiLtJ_T0011524.1 MGP_NODShiLtJ_G0009657.1 mouse_genomes_project 6 32355896 32356223 - Gm25580 misc_RNA misc_RNA MGP_NODShiLtJ_T0077282.1 MGP_NODShiLtJ_G0030563.1 mouse_genomes_project 6 59663117 59665196 + Prr15 protein_coding retained_intron MGP_NODShiLtJ_T0077283.1 MGP_NODShiLtJ_G0030563.1 mouse_genomes_project 6 59664165 59667476 + MGP_NODShiLtJ_P0077283 Prr15 protein_coding protein_coding MGP_NODShiLtJ_T0001926.1 MGP_NODShiLtJ_G0001838.1 mouse_genomes_project 6 49736524 49738686 + TEC TEC MGP_NODShiLtJ_T0077151.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55338614 55438227 - MGP_NODShiLtJ_P0077151 Osbpl3 protein_coding protein_coding MGP_NODShiLtJ_T0077152.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55340467 55351263 - Osbpl3 protein_coding retained_intron MGP_NODShiLtJ_T0077153.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55340971 55425125 - MGP_NODShiLtJ_P0077153 Osbpl3 protein_coding protein_coding MGP_NODShiLtJ_T0077154.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55342082 55517973 - MGP_NODShiLtJ_P0077154 Osbpl3 protein_coding protein_coding MGP_NODShiLtJ_T0077155.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55342088 55425228 - MGP_NODShiLtJ_P0077155 Osbpl3 protein_coding protein_coding MGP_NODShiLtJ_T0077156.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55351122 55438227 - Osbpl3 protein_coding retained_intron MGP_NODShiLtJ_T0077157.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55381274 55406888 - MGP_NODShiLtJ_P0077157 Osbpl3 protein_coding protein_coding MGP_NODShiLtJ_T0077158.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55402827 55517964 - MGP_NODShiLtJ_P0077158 Osbpl3 protein_coding protein_coding MGP_NODShiLtJ_T0077159.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55407750 55453491 - MGP_NODShiLtJ_P0077159 Osbpl3 protein_coding protein_coding MGP_NODShiLtJ_T0077160.1 MGP_NODShiLtJ_G0030533.1 mouse_genomes_project 6 55470242 55518004 - Osbpl3 protein_coding processed_transcript MGP_NODShiLtJ_T0100685.1 MGP_NODShiLtJ_G0039079.1 mouse_genomes_project 6 80735259 80735396 - Gm22486 snoRNA snoRNA MGP_NODShiLtJ_T0080064.1 MGP_NODShiLtJ_G0031150.1 mouse_genomes_project 6 145695045 145704654 - MGP_NODShiLtJ_P0080064 4922502D21Rik protein_coding protein_coding MGP_NODShiLtJ_T0080065.1 MGP_NODShiLtJ_G0031150.1 mouse_genomes_project 6 145695728 145699542 - MGP_NODShiLtJ_P0080065 4922502D21Rik protein_coding protein_coding MGP_NODShiLtJ_T0008648.1 MGP_NODShiLtJ_G0006983.1 mouse_genomes_project 6 139967543 139970351 + Gm43971 lincRNA lincRNA MGP_NODShiLtJ_T0076606.1 MGP_NODShiLtJ_G0030382.1 mouse_genomes_project 6 39555760 39672289 - MGP_NODShiLtJ_P0076606 Ptn protein_coding protein_coding MGP_NODShiLtJ_T0076607.1 MGP_NODShiLtJ_G0030382.1 mouse_genomes_project 6 39586169 39672248 - MGP_NODShiLtJ_P0076607 Ptn protein_coding protein_coding MGP_NODShiLtJ_T0015345.1 MGP_NODShiLtJ_G0013453.1 mouse_genomes_project 6 96280350 96280894 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015479.1 MGP_NODShiLtJ_G0013587.1 mouse_genomes_project 6 144556350 144557583 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101994.1 MGP_NODShiLtJ_G0040162.1 mouse_genomes_project 6 62834306 62835144 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0079679.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140537064 140540620 - Eno2 protein_coding retained_intron MGP_NODShiLtJ_T0079680.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140537066 140546950 - MGP_NODShiLtJ_P0079680 Eno2 protein_coding protein_coding MGP_NODShiLtJ_T0079681.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140537066 140547002 - MGP_NODShiLtJ_P0079681 Eno2 protein_coding protein_coding MGP_NODShiLtJ_T0079682.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140537376 140545666 - Eno2 protein_coding retained_intron MGP_NODShiLtJ_T0079683.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140537932 140546849 - MGP_NODShiLtJ_P0079683 Eno2 protein_coding protein_coding MGP_NODShiLtJ_T0079684.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140538165 140540294 - Eno2 protein_coding retained_intron MGP_NODShiLtJ_T0079685.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140538224 140540330 - Eno2 protein_coding retained_intron MGP_NODShiLtJ_T0079686.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140539664 140540929 - Eno2 protein_coding processed_transcript MGP_NODShiLtJ_T0079687.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140540774 140545659 - MGP_NODShiLtJ_P0079687 Eno2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079688.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140540877 140545705 - MGP_NODShiLtJ_P0079688 Eno2 protein_coding protein_coding MGP_NODShiLtJ_T0079689.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140543469 140546813 - MGP_NODShiLtJ_P0079689 Eno2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079690.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140543550 140545660 - MGP_NODShiLtJ_P0079690 Eno2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079691.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140543613 140546879 - MGP_NODShiLtJ_P0079691 Eno2 protein_coding protein_coding MGP_NODShiLtJ_T0079692.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140544098 140545666 - Eno2 protein_coding retained_intron MGP_NODShiLtJ_T0079693.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140544276 140546845 - Eno2 protein_coding retained_intron MGP_NODShiLtJ_T0079694.1 MGP_NODShiLtJ_G0031072.1 mouse_genomes_project 6 140545036 140546815 - MGP_NODShiLtJ_P0079694 Eno2 protein_coding protein_coding MGP_NODShiLtJ_T0078086.1 MGP_NODShiLtJ_G0030757.1 mouse_genomes_project 6 96403918 96420770 + MGP_NODShiLtJ_P0078086 Emx1 protein_coding protein_coding MGP_NODShiLtJ_T0078087.1 MGP_NODShiLtJ_G0030757.1 mouse_genomes_project 6 96409979 96420874 + Emx1 protein_coding retained_intron MGP_NODShiLtJ_T0008630.1 MGP_NODShiLtJ_G0006967.1 mouse_genomes_project 6 128225189 128226113 + Gm44053 lincRNA lincRNA MGP_NODShiLtJ_T0015498.1 MGP_NODShiLtJ_G0013606.1 mouse_genomes_project 6 148940856 148941337 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005024.1 MGP_NODShiLtJ_G0004284.1 mouse_genomes_project 6 140507282 140513131 + Gm20531 antisense antisense MGP_NODShiLtJ_T0001887.1 MGP_NODShiLtJ_G0001799.1 mouse_genomes_project 6 17537902 17539716 - TEC TEC MGP_NODShiLtJ_T0008606.1 MGP_NODShiLtJ_G0006948.1 mouse_genomes_project 6 110747349 110965839 - Gm44196 lincRNA lincRNA MGP_NODShiLtJ_T0008608.1 MGP_NODShiLtJ_G0006948.1 mouse_genomes_project 6 110929467 110965858 - Gm44196 lincRNA lincRNA MGP_NODShiLtJ_T0008609.1 MGP_NODShiLtJ_G0006948.1 mouse_genomes_project 6 110960967 110965888 - Gm44196 lincRNA lincRNA MGP_NODShiLtJ_T0078854.1 MGP_NODShiLtJ_G0030915.1 mouse_genomes_project 6 126878882 126897654 - MGP_NODShiLtJ_P0078854 Oxtr protein_coding protein_coding MGP_NODShiLtJ_T0078855.1 MGP_NODShiLtJ_G0030915.1 mouse_genomes_project 6 126878886 126896105 - MGP_NODShiLtJ_P0078855 Oxtr protein_coding protein_coding MGP_NODShiLtJ_T0008537.1 MGP_NODShiLtJ_G0006892.1 mouse_genomes_project 6 61126268 61136239 + Gm3279 lincRNA lincRNA MGP_NODShiLtJ_T0078295.1 MGP_NODShiLtJ_G0030799.1 mouse_genomes_project 6 98994832 99006972 - MGP_NODShiLtJ_P0078295 Prokr1 protein_coding protein_coding MGP_NODShiLtJ_T0078296.1 MGP_NODShiLtJ_G0030799.1 mouse_genomes_project 6 98994833 99006949 - MGP_NODShiLtJ_P0078296 Prokr1 protein_coding protein_coding MGP_NODShiLtJ_T0078297.1 MGP_NODShiLtJ_G0030799.1 mouse_genomes_project 6 99004637 99006948 - MGP_NODShiLtJ_P0078297 Prokr1 protein_coding protein_coding MGP_NODShiLtJ_T0078799.1 MGP_NODShiLtJ_G0030902.1 mouse_genomes_project 6 120438612 120447208 + MGP_NODShiLtJ_P0078799 Trnt1 protein_coding protein_coding MGP_NODShiLtJ_T0078800.1 MGP_NODShiLtJ_G0030902.1 mouse_genomes_project 6 120438633 120451373 + MGP_NODShiLtJ_P0078800 Trnt1 protein_coding protein_coding MGP_NODShiLtJ_T0078801.1 MGP_NODShiLtJ_G0030902.1 mouse_genomes_project 6 120438658 120451976 + MGP_NODShiLtJ_P0078801 Trnt1 protein_coding protein_coding MGP_NODShiLtJ_T0078802.1 MGP_NODShiLtJ_G0030902.1 mouse_genomes_project 6 120438658 120451156 + MGP_NODShiLtJ_P0078802 Trnt1 protein_coding protein_coding MGP_NODShiLtJ_T0078803.1 MGP_NODShiLtJ_G0030902.1 mouse_genomes_project 6 120438662 120439657 + Trnt1 protein_coding retained_intron MGP_NODShiLtJ_T0078804.1 MGP_NODShiLtJ_G0030902.1 mouse_genomes_project 6 120438705 120442593 + Trnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0078805.1 MGP_NODShiLtJ_G0030902.1 mouse_genomes_project 6 120438778 120442901 + MGP_NODShiLtJ_P0078805 Trnt1 protein_coding protein_coding MGP_NODShiLtJ_T0078806.1 MGP_NODShiLtJ_G0030902.1 mouse_genomes_project 6 120438999 120444007 + MGP_NODShiLtJ_P0078806 Trnt1 protein_coding protein_coding MGP_NODShiLtJ_T0010670.1 MGP_NODShiLtJ_G0008803.1 mouse_genomes_project 6 92810215 92810289 - Mir7232 miRNA miRNA MGP_NODShiLtJ_T0100692.1 MGP_NODShiLtJ_G0039086.1 mouse_genomes_project 6 105105882 105106013 - Gm25094 snoRNA snoRNA MGP_NODShiLtJ_T0011550.1 MGP_NODShiLtJ_G0009683.1 mouse_genomes_project 6 96249494 96249749 + Gm26353 misc_RNA misc_RNA MGP_NODShiLtJ_T0080207.1 MGP_NODShiLtJ_G0031216.1 mouse_genomes_project 6 152029460 152054292 - MGP_NODShiLtJ_P0080207 Mansc1 protein_coding protein_coding MGP_NODShiLtJ_T0080059.1 MGP_NODShiLtJ_G0031149.1 mouse_genomes_project 6 145634148 145642259 - MGP_NODShiLtJ_P0080059 Cd69 protein_coding protein_coding MGP_NODShiLtJ_T0080060.1 MGP_NODShiLtJ_G0031149.1 mouse_genomes_project 6 145635082 145642189 - MGP_NODShiLtJ_P0080060 Cd69 protein_coding protein_coding MGP_NODShiLtJ_T0080061.1 MGP_NODShiLtJ_G0031149.1 mouse_genomes_project 6 145636273 145642192 - Cd69 protein_coding retained_intron MGP_NODShiLtJ_T0080062.1 MGP_NODShiLtJ_G0031149.1 mouse_genomes_project 6 145637231 145642192 - Cd69 protein_coding retained_intron MGP_NODShiLtJ_T0080063.1 MGP_NODShiLtJ_G0031149.1 mouse_genomes_project 6 145637977 145642192 - Cd69 protein_coding retained_intron MGP_NODShiLtJ_T0010649.1 MGP_NODShiLtJ_G0008782.1 mouse_genomes_project 6 32179441 32179539 + Gm23049 miRNA miRNA MGP_NODShiLtJ_T0076646.1 MGP_NODShiLtJ_G0030391.1 mouse_genomes_project 6 41298381 41313567 - MGP_NODShiLtJ_P0076646 Zc3hav1l protein_coding protein_coding MGP_NODShiLtJ_T0076907.1 MGP_NODShiLtJ_G0030476.1 mouse_genomes_project 6 46805860 46806860 + MGP_NODShiLtJ_P0076907 Olfr237-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0004843.1 MGP_NODShiLtJ_G0004159.1 mouse_genomes_project 6 3997043 4043859 - Dlx6os1 antisense antisense MGP_NODShiLtJ_T0004844.1 MGP_NODShiLtJ_G0004159.1 mouse_genomes_project 6 3997397 4054371 - Dlx6os1 antisense antisense MGP_NODShiLtJ_T0076769.1 MGP_NODShiLtJ_G0030417.1 mouse_genomes_project 6 43751846 43752919 + MGP_NODShiLtJ_P0076769 Tas2r137 protein_coding protein_coding MGP_NODShiLtJ_T0015411.1 MGP_NODShiLtJ_G0013519.1 mouse_genomes_project 6 124050257 124050801 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005005.1 MGP_NODShiLtJ_G0004265.1 mouse_genomes_project 6 127745232 127746327 - Gm16161 antisense antisense MGP_NODShiLtJ_T0015382.1 MGP_NODShiLtJ_G0013490.1 mouse_genomes_project 6 111135785 111136261 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008686.1 MGP_NODShiLtJ_G0007010.1 mouse_genomes_project 6 161495663 161497626 + A930014E10Rik lincRNA lincRNA MGP_NODShiLtJ_T0076397.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32726387 32757500 - MGP_NODShiLtJ_P0076397 Tmem209 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076398.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32728131 32757511 - MGP_NODShiLtJ_P0076398 Tmem209 protein_coding protein_coding MGP_NODShiLtJ_T0076399.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32728356 32757512 - MGP_NODShiLtJ_P0076399 Tmem209 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076400.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32728562 32757579 - MGP_NODShiLtJ_P0076400 Tmem209 protein_coding protein_coding MGP_NODShiLtJ_T0076401.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32729749 32757514 - MGP_NODShiLtJ_P0076401 Tmem209 protein_coding protein_coding MGP_NODShiLtJ_T0076402.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32730135 32757511 - MGP_NODShiLtJ_P0076402 Tmem209 protein_coding protein_coding MGP_NODShiLtJ_T0076403.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32737682 32739506 - Tmem209 protein_coding retained_intron MGP_NODShiLtJ_T0076404.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32749329 32757545 - MGP_NODShiLtJ_P0076404 Tmem209 protein_coding protein_coding MGP_NODShiLtJ_T0076405.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32752544 32757518 - Tmem209 protein_coding retained_intron MGP_NODShiLtJ_T0076406.1 MGP_NODShiLtJ_G0030345.1 mouse_genomes_project 6 32753547 32757520 - MGP_NODShiLtJ_P0076406 Tmem209 protein_coding protein_coding MGP_NODShiLtJ_T0078615.1 MGP_NODShiLtJ_G0030864.1 mouse_genomes_project 6 103854692 103883963 - MGP_NODShiLtJ_P0078615 Rbsn protein_coding protein_coding MGP_NODShiLtJ_T0078616.1 MGP_NODShiLtJ_G0030864.1 mouse_genomes_project 6 103857825 103867701 - MGP_NODShiLtJ_P0078616 Rbsn protein_coding protein_coding MGP_NODShiLtJ_T0078617.1 MGP_NODShiLtJ_G0030864.1 mouse_genomes_project 6 103858367 103869608 - Rbsn protein_coding processed_transcript MGP_NODShiLtJ_T0078618.1 MGP_NODShiLtJ_G0030864.1 mouse_genomes_project 6 103858730 103862110 - Rbsn protein_coding retained_intron MGP_NODShiLtJ_T0078619.1 MGP_NODShiLtJ_G0030864.1 mouse_genomes_project 6 103875141 103883887 - MGP_NODShiLtJ_P0078619 Rbsn protein_coding protein_coding MGP_NODShiLtJ_T0078620.1 MGP_NODShiLtJ_G0030864.1 mouse_genomes_project 6 103879606 103883607 - MGP_NODShiLtJ_P0078620 Rbsn protein_coding protein_coding MGP_NODShiLtJ_T0015439.1 MGP_NODShiLtJ_G0013547.1 mouse_genomes_project 6 133481936 133483536 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015453.1 MGP_NODShiLtJ_G0013561.1 mouse_genomes_project 6 137792322 137792616 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015128.1 MGP_NODShiLtJ_G0013236.1 mouse_genomes_project 6 8047517 8048142 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077390.1 MGP_NODShiLtJ_G0030588.1 mouse_genomes_project 6 62479847 62484239 + Vmn1r4 protein_coding retained_intron MGP_NODShiLtJ_T0077391.1 MGP_NODShiLtJ_G0030588.1 mouse_genomes_project 6 62479854 62521899 + MGP_NODShiLtJ_P0077391 Vmn1r4 protein_coding protein_coding MGP_NODShiLtJ_T0077392.1 MGP_NODShiLtJ_G0030588.1 mouse_genomes_project 6 62520542 62521576 + MGP_NODShiLtJ_P0077392 Vmn1r4 protein_coding protein_coding MGP_NODShiLtJ_T0077809.1 MGP_NODShiLtJ_G0030704.1 mouse_genomes_project 6 88545564 88548512 + MGP_NODShiLtJ_P0077809 Reg2 protein_coding protein_coding MGP_NODShiLtJ_T0079937.1 MGP_NODShiLtJ_G0031118.1 mouse_genomes_project 6 143072987 143081439 + MGP_NODShiLtJ_P0079937 Fgf23 protein_coding protein_coding MGP_NODShiLtJ_T0001924.1 MGP_NODShiLtJ_G0001836.1 mouse_genomes_project 6 49588638 49595179 + TEC TEC MGP_NODShiLtJ_T0015259.1 MGP_NODShiLtJ_G0013367.1 mouse_genomes_project 6 69777014 69778146 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010685.1 MGP_NODShiLtJ_G0008818.1 mouse_genomes_project 6 115485982 115486084 + Mir6373 miRNA miRNA MGP_NODShiLtJ_T0004937.1 MGP_NODShiLtJ_G0004227.1 mouse_genomes_project 6 94612468 94636860 + Gm21284 antisense antisense MGP_NODShiLtJ_T0004995.1 MGP_NODShiLtJ_G0004260.1 mouse_genomes_project 6 122306061 122312755 - Gm44040 antisense antisense MGP_NODShiLtJ_T0015340.1 MGP_NODShiLtJ_G0013448.1 mouse_genomes_project 6 94913299 94914065 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080526.1 MGP_NODShiLtJ_G0031283.1 mouse_genomes_project 6 161327974 161485446 - MGP_NODShiLtJ_P0080526 St8sia1 protein_coding protein_coding MGP_NODShiLtJ_T0080527.1 MGP_NODShiLtJ_G0031283.1 mouse_genomes_project 6 161334659 161485135 - MGP_NODShiLtJ_P0080527 St8sia1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080528.1 MGP_NODShiLtJ_G0031283.1 mouse_genomes_project 6 161335289 161393001 - St8sia1 protein_coding processed_transcript MGP_NODShiLtJ_T0080678.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165648426 165796423 + MGP_NODShiLtJ_P0080678 Ppfibp1 protein_coding protein_coding MGP_NODShiLtJ_T0080679.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165648448 165738305 + MGP_NODShiLtJ_P0080679 Ppfibp1 protein_coding protein_coding MGP_NODShiLtJ_T0080680.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165648528 165796423 + MGP_NODShiLtJ_P0080680 Ppfibp1 protein_coding protein_coding MGP_NODShiLtJ_T0080683.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165736723 165755646 + MGP_NODShiLtJ_P0080683 Ppfibp1 protein_coding protein_coding MGP_NODShiLtJ_T0080684.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165755690 165769160 + MGP_NODShiLtJ_P0080684 Ppfibp1 protein_coding protein_coding MGP_NODShiLtJ_T0080685.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165759635 165765400 + Ppfibp1 protein_coding processed_transcript MGP_NODShiLtJ_T0080686.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165762723 165796421 + Ppfibp1 protein_coding retained_intron MGP_NODShiLtJ_T0080687.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165763485 165780684 + Ppfibp1 protein_coding retained_intron MGP_NODShiLtJ_T0080688.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165764844 165769188 + Ppfibp1 protein_coding retained_intron MGP_NODShiLtJ_T0080689.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165765393 165782418 + MGP_NODShiLtJ_P0080689 Ppfibp1 protein_coding protein_coding MGP_NODShiLtJ_T0080690.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165768261 165769518 + Ppfibp1 protein_coding retained_intron MGP_NODShiLtJ_T0080691.1 MGP_NODShiLtJ_G0031305.1 mouse_genomes_project 6 165774122 165782826 + MGP_NODShiLtJ_P0080691 Ppfibp1 protein_coding protein_coding MGP_NODShiLtJ_T0001970.1 MGP_NODShiLtJ_G0001882.1 mouse_genomes_project 6 81573192 81574426 - TEC TEC MGP_NODShiLtJ_T0077112.1 MGP_NODShiLtJ_G0030525.1 mouse_genomes_project 6 54008347 54154333 - MGP_NODShiLtJ_P0077112 Igf2bp3 protein_coding protein_coding MGP_NODShiLtJ_T0077113.1 MGP_NODShiLtJ_G0030525.1 mouse_genomes_project 6 54011245 54017329 - Igf2bp3 protein_coding retained_intron MGP_NODShiLtJ_T0077114.1 MGP_NODShiLtJ_G0030525.1 mouse_genomes_project 6 54016228 54153535 - Igf2bp3 protein_coding retained_intron MGP_NODShiLtJ_T0077115.1 MGP_NODShiLtJ_G0030525.1 mouse_genomes_project 6 54033277 54036982 - Igf2bp3 protein_coding processed_transcript MGP_NODShiLtJ_T0077116.1 MGP_NODShiLtJ_G0030525.1 mouse_genomes_project 6 54093835 54154078 - Igf2bp3 protein_coding processed_transcript MGP_NODShiLtJ_T0078288.1 MGP_NODShiLtJ_G0030795.1 mouse_genomes_project 6 98766666 98772817 + MGP_NODShiLtJ_P0078288 Gkn2 protein_coding protein_coding MGP_NODShiLtJ_T0004934.1 MGP_NODShiLtJ_G0004226.1 mouse_genomes_project 6 94188565 94195163 - Gm15624 antisense antisense MGP_NODShiLtJ_T0004935.1 MGP_NODShiLtJ_G0004226.1 mouse_genomes_project 6 94191779 94195185 - Gm15624 antisense antisense MGP_NODShiLtJ_T0004936.1 MGP_NODShiLtJ_G0004226.1 mouse_genomes_project 6 94192235 94194984 - Gm15624 antisense antisense MGP_NODShiLtJ_T0000193.1 MGP_NODShiLtJ_G0000140.1 mouse_genomes_project 6 78396400 78396995 - MGP_NODShiLtJ_P0000193 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0010690.1 MGP_NODShiLtJ_G0008823.1 mouse_genomes_project 6 128016103 128016228 - Gm23365 miRNA miRNA MGP_NODShiLtJ_T0005075.1 MGP_NODShiLtJ_G0004327.1 mouse_genomes_project 6 166818109 166856927 - Far2os2 antisense antisense MGP_NODShiLtJ_T0076281.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31533204 31536345 + Ccdc136 protein_coding processed_transcript MGP_NODShiLtJ_T0076282.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31533525 31565229 + MGP_NODShiLtJ_P0076282 Ccdc136 protein_coding protein_coding MGP_NODShiLtJ_T0076283.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31533538 31565224 + MGP_NODShiLtJ_P0076283 Ccdc136 protein_coding protein_coding MGP_NODShiLtJ_T0076284.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31533580 31565270 + MGP_NODShiLtJ_P0076284 Ccdc136 protein_coding protein_coding MGP_NODShiLtJ_T0076285.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31533580 31560368 + MGP_NODShiLtJ_P0076285 Ccdc136 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0076286.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31535821 31565224 + MGP_NODShiLtJ_P0076286 Ccdc136 protein_coding protein_coding MGP_NODShiLtJ_T0076287.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31535821 31565231 + MGP_NODShiLtJ_P0076287 Ccdc136 protein_coding protein_coding MGP_NODShiLtJ_T0076288.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31541156 31565133 + MGP_NODShiLtJ_P0076288 Ccdc136 protein_coding protein_coding MGP_NODShiLtJ_T0076289.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31548380 31565264 + MGP_NODShiLtJ_P0076289 Ccdc136 protein_coding protein_coding MGP_NODShiLtJ_T0076290.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31550759 31565228 + Ccdc136 protein_coding processed_transcript MGP_NODShiLtJ_T0076291.1 MGP_NODShiLtJ_G0030330.1 mouse_genomes_project 6 31553227 31565230 + Ccdc136 protein_coding processed_transcript MGP_NODShiLtJ_T0002092.1 MGP_NODShiLtJ_G0002004.1 mouse_genomes_project 6 140082776 140084802 - TEC TEC MGP_NODShiLtJ_T0000297.1 MGP_NODShiLtJ_G0000235.1 mouse_genomes_project 6 76875126 76875424 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0075791.1 MGP_NODShiLtJ_G0030227.1 mouse_genomes_project 6 108725 113750 - MGP_NODShiLtJ_P0075791 Samd9l protein_coding protein_coding MGP_NODShiLtJ_T0075792.1 MGP_NODShiLtJ_G0030227.1 mouse_genomes_project 6 113418 187928 - MGP_NODShiLtJ_P0075792 Samd9l protein_coding protein_coding MGP_NODShiLtJ_T0078082.1 MGP_NODShiLtJ_G0030756.1 mouse_genomes_project 6 96333209 96345111 - MGP_NODShiLtJ_P0078082 Spr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078083.1 MGP_NODShiLtJ_G0030756.1 mouse_genomes_project 6 96339920 96345111 - MGP_NODShiLtJ_P0078083 Spr protein_coding protein_coding MGP_NODShiLtJ_T0078084.1 MGP_NODShiLtJ_G0030756.1 mouse_genomes_project 6 96339929 96345101 - MGP_NODShiLtJ_P0078084 Spr protein_coding protein_coding MGP_NODShiLtJ_T0078085.1 MGP_NODShiLtJ_G0030756.1 mouse_genomes_project 6 96340242 96345107 - MGP_NODShiLtJ_P0078085 Spr protein_coding protein_coding MGP_NODShiLtJ_T0015506.1 MGP_NODShiLtJ_G0013614.1 mouse_genomes_project 6 150289143 150289792 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001909.1 MGP_NODShiLtJ_G0001821.1 mouse_genomes_project 6 38954212 38956616 - TEC TEC MGP_NODShiLtJ_T0075887.1 MGP_NODShiLtJ_G0030246.1 mouse_genomes_project 6 3151967 3335086 - MGP_NODShiLtJ_P0075887 Slc25a13 protein_coding protein_coding MGP_NODShiLtJ_T0075888.1 MGP_NODShiLtJ_G0030246.1 mouse_genomes_project 6 3151968 3335141 - MGP_NODShiLtJ_P0075888 Slc25a13 protein_coding protein_coding MGP_NODShiLtJ_T0075889.1 MGP_NODShiLtJ_G0030246.1 mouse_genomes_project 6 3179625 3206559 - Slc25a13 protein_coding processed_transcript MGP_NODShiLtJ_T0075890.1 MGP_NODShiLtJ_G0030246.1 mouse_genomes_project 6 3226862 3287640 - Slc25a13 protein_coding processed_transcript MGP_NODShiLtJ_T0075891.1 MGP_NODShiLtJ_G0030246.1 mouse_genomes_project 6 3243907 3308263 - Slc25a13 protein_coding retained_intron MGP_NODShiLtJ_T0015475.1 MGP_NODShiLtJ_G0013583.1 mouse_genomes_project 6 143391756 143393218 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011557.1 MGP_NODShiLtJ_G0009690.1 mouse_genomes_project 6 126389262 126389577 + Gm25454 misc_RNA misc_RNA MGP_NODShiLtJ_T0010676.1 MGP_NODShiLtJ_G0008809.1 mouse_genomes_project 6 97075610 97075705 - Gm27317 miRNA miRNA MGP_NODShiLtJ_T0008541.1 MGP_NODShiLtJ_G0006896.1 mouse_genomes_project 6 66454691 66459225 + lincRNA lincRNA MGP_NODShiLtJ_T0015533.1 MGP_NODShiLtJ_G0013641.1 mouse_genomes_project 6 164006326 164007322 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015511.1 MGP_NODShiLtJ_G0013619.1 mouse_genomes_project 6 151256675 151257344 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015458.1 MGP_NODShiLtJ_G0013566.1 mouse_genomes_project 6 138626896 138626990 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008531.1 MGP_NODShiLtJ_G0006887.1 mouse_genomes_project 6 57738500 57747030 + lincRNA lincRNA MGP_NODShiLtJ_T0015478.1 MGP_NODShiLtJ_G0013586.1 mouse_genomes_project 6 144386843 144387240 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008617.1 MGP_NODShiLtJ_G0006956.1 mouse_genomes_project 6 114053129 114071824 + Gm44169 lincRNA lincRNA MGP_NODShiLtJ_T0076120.1 MGP_NODShiLtJ_G0030290.1 mouse_genomes_project 6 22555979 22863866 + MGP_NODShiLtJ_P0076120 Cped1 protein_coding protein_coding MGP_NODShiLtJ_T0076121.1 MGP_NODShiLtJ_G0030290.1 mouse_genomes_project 6 22556007 22581137 + Cped1 protein_coding processed_transcript MGP_NODShiLtJ_T0076122.1 MGP_NODShiLtJ_G0030290.1 mouse_genomes_project 6 22556007 22719375 + MGP_NODShiLtJ_P0076122 Cped1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076123.1 MGP_NODShiLtJ_G0030290.1 mouse_genomes_project 6 22556659 22718402 + MGP_NODShiLtJ_P0076123 Cped1 protein_coding protein_coding MGP_NODShiLtJ_T0076124.1 MGP_NODShiLtJ_G0030290.1 mouse_genomes_project 6 22556955 22649213 + Cped1 protein_coding processed_transcript MGP_NODShiLtJ_T0076125.1 MGP_NODShiLtJ_G0030290.1 mouse_genomes_project 6 22588491 22847355 + MGP_NODShiLtJ_P0076125 Cped1 protein_coding protein_coding MGP_NODShiLtJ_T0076126.1 MGP_NODShiLtJ_G0030290.1 mouse_genomes_project 6 22598388 22665394 + Cped1 protein_coding processed_transcript MGP_NODShiLtJ_T0076127.1 MGP_NODShiLtJ_G0030290.1 mouse_genomes_project 6 22728252 22743613 + Cped1 protein_coding retained_intron MGP_NODShiLtJ_T0079362.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852838 134866422 + Rad52 protein_coding processed_transcript MGP_NODShiLtJ_T0079363.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852843 134880196 + MGP_NODShiLtJ_P0079363 Rad52 protein_coding protein_coding MGP_NODShiLtJ_T0079364.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852843 134880201 + MGP_NODShiLtJ_P0079364 Rad52 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079365.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852845 134864811 + Rad52 protein_coding retained_intron MGP_NODShiLtJ_T0079366.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852845 134864184 + Rad52 protein_coding processed_transcript MGP_NODShiLtJ_T0079367.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852868 134877006 + Rad52 protein_coding retained_intron MGP_NODShiLtJ_T0079368.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852874 134874859 + Rad52 protein_coding processed_transcript MGP_NODShiLtJ_T0079369.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852874 134874859 + Rad52 protein_coding processed_transcript MGP_NODShiLtJ_T0079370.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852879 134876504 + Rad52 protein_coding retained_intron MGP_NODShiLtJ_T0079371.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134852916 134880196 + MGP_NODShiLtJ_P0079371 Rad52 protein_coding protein_coding MGP_NODShiLtJ_T0079372.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134864324 134865305 + Rad52 protein_coding retained_intron MGP_NODShiLtJ_T0079373.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134865037 134874477 + Rad52 protein_coding retained_intron MGP_NODShiLtJ_T0079374.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134866338 134874622 + Rad52 protein_coding retained_intron MGP_NODShiLtJ_T0079375.1 MGP_NODShiLtJ_G0031002.1 mouse_genomes_project 6 134873772 134877280 + Rad52 protein_coding retained_intron MGP_NODShiLtJ_T0015449.1 MGP_NODShiLtJ_G0013557.1 mouse_genomes_project 6 137148068 137148200 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008642.1 MGP_NODShiLtJ_G0006977.1 mouse_genomes_project 6 133105155 133107505 + Gm30557 lincRNA lincRNA MGP_NODShiLtJ_T0079429.1 MGP_NODShiLtJ_G0031011.1 mouse_genomes_project 6 135575536 135601500 - MGP_NODShiLtJ_P0079429 Cecr5 protein_coding protein_coding MGP_NODShiLtJ_T0079430.1 MGP_NODShiLtJ_G0031011.1 mouse_genomes_project 6 135589564 135601485 - Cecr5 protein_coding retained_intron MGP_NODShiLtJ_T0079431.1 MGP_NODShiLtJ_G0031011.1 mouse_genomes_project 6 135590443 135601471 - Cecr5 protein_coding retained_intron MGP_NODShiLtJ_T0079432.1 MGP_NODShiLtJ_G0031011.1 mouse_genomes_project 6 135600148 135601483 - Cecr5 protein_coding retained_intron MGP_NODShiLtJ_T0076798.1 MGP_NODShiLtJ_G0030433.1 mouse_genomes_project 6 44700149 44706254 - MGP_NODShiLtJ_P0076798 protein_coding protein_coding MGP_NODShiLtJ_T0077608.1 MGP_NODShiLtJ_G0030665.1 mouse_genomes_project 6 80157304 80161377 + Cd8a protein_coding retained_intron MGP_NODShiLtJ_T0077609.1 MGP_NODShiLtJ_G0030665.1 mouse_genomes_project 6 80157309 80160681 + MGP_NODShiLtJ_P0077609 Cd8a protein_coding protein_coding MGP_NODShiLtJ_T0075906.1 MGP_NODShiLtJ_G0030252.1 mouse_genomes_project 6 4917712 4937215 - MGP_NODShiLtJ_P0075906 Asns protein_coding protein_coding MGP_NODShiLtJ_T0075907.1 MGP_NODShiLtJ_G0030252.1 mouse_genomes_project 6 4917712 4936832 - MGP_NODShiLtJ_P0075907 Asns protein_coding protein_coding MGP_NODShiLtJ_T0075908.1 MGP_NODShiLtJ_G0030252.1 mouse_genomes_project 6 4918013 4919929 - Asns protein_coding processed_transcript MGP_NODShiLtJ_T0075909.1 MGP_NODShiLtJ_G0030252.1 mouse_genomes_project 6 4923820 4924806 - Asns protein_coding retained_intron MGP_NODShiLtJ_T0075910.1 MGP_NODShiLtJ_G0030252.1 mouse_genomes_project 6 4924720 4937071 - MGP_NODShiLtJ_P0075910 Asns protein_coding protein_coding MGP_NODShiLtJ_T0075911.1 MGP_NODShiLtJ_G0030252.1 mouse_genomes_project 6 4929139 4936178 - MGP_NODShiLtJ_P0075911 Asns protein_coding protein_coding MGP_NODShiLtJ_T0075912.1 MGP_NODShiLtJ_G0030252.1 mouse_genomes_project 6 4929231 4936833 - MGP_NODShiLtJ_P0075912 Asns protein_coding protein_coding MGP_NODShiLtJ_T0079847.1 MGP_NODShiLtJ_G0031096.1 mouse_genomes_project 6 140998647 141000409 + Mrpl51 protein_coding processed_transcript MGP_NODShiLtJ_T0079848.1 MGP_NODShiLtJ_G0031096.1 mouse_genomes_project 6 140999011 141003121 + MGP_NODShiLtJ_P0079848 Mrpl51 protein_coding protein_coding MGP_NODShiLtJ_T0079849.1 MGP_NODShiLtJ_G0031096.1 mouse_genomes_project 6 140999063 140999725 + Mrpl51 protein_coding retained_intron MGP_NODShiLtJ_T0078164.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97340823 97414595 + Add2 protein_coding retained_intron MGP_NODShiLtJ_T0078165.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97340846 97441870 + MGP_NODShiLtJ_P0078165 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0078166.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97340889 97426949 + MGP_NODShiLtJ_P0078166 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0078167.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97368121 97410830 + MGP_NODShiLtJ_P0078167 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0078168.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97395389 97437029 + MGP_NODShiLtJ_P0078168 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0078169.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97395389 97426947 + MGP_NODShiLtJ_P0078169 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0078170.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97395416 97437029 + MGP_NODShiLtJ_P0078170 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0078171.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97400137 97436300 + MGP_NODShiLtJ_P0078171 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0078172.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97400137 97425778 + MGP_NODShiLtJ_P0078172 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0078173.1 MGP_NODShiLtJ_G0030775.1 mouse_genomes_project 6 97403211 97436276 + MGP_NODShiLtJ_P0078173 Add2 protein_coding protein_coding MGP_NODShiLtJ_T0098060.1 MGP_NODShiLtJ_G0036472.1 mouse_genomes_project 6 24475741 24475874 - Gm24217 rRNA rRNA MGP_NODShiLtJ_T0015518.1 MGP_NODShiLtJ_G0013626.1 mouse_genomes_project 6 154287222 154287501 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010678.1 MGP_NODShiLtJ_G0008811.1 mouse_genomes_project 6 99427722 99427850 - miRNA miRNA MGP_NODShiLtJ_T0015388.1 MGP_NODShiLtJ_G0013496.1 mouse_genomes_project 6 113411787 113421121 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080159.1 MGP_NODShiLtJ_G0031187.1 mouse_genomes_project 6 148467895 148468825 - MGP_NODShiLtJ_P0080159 Tas2r114 protein_coding protein_coding MGP_NODShiLtJ_T0076601.1 MGP_NODShiLtJ_G0030379.1 mouse_genomes_project 6 37919641 37933749 - MGP_NODShiLtJ_P0076601 Fam180a protein_coding protein_coding MGP_NODShiLtJ_T0078626.1 MGP_NODShiLtJ_G0030867.1 mouse_genomes_project 6 104489560 104674558 - MGP_NODShiLtJ_P0078626 Adamts9 protein_coding protein_coding MGP_NODShiLtJ_T0078627.1 MGP_NODShiLtJ_G0030867.1 mouse_genomes_project 6 104515884 104589125 - Adamts9 protein_coding retained_intron MGP_NODShiLtJ_T0078630.1 MGP_NODShiLtJ_G0030867.1 mouse_genomes_project 6 104572005 104589135 - Adamts9 protein_coding retained_intron MGP_NODShiLtJ_T0078631.1 MGP_NODShiLtJ_G0030867.1 mouse_genomes_project 6 104579884 104583604 - Adamts9 protein_coding retained_intron MGP_NODShiLtJ_T0078633.1 MGP_NODShiLtJ_G0030867.1 mouse_genomes_project 6 104656492 104674895 - Adamts9 protein_coding processed_transcript MGP_NODShiLtJ_T0077122.1 MGP_NODShiLtJ_G0030527.1 mouse_genomes_project 6 54269398 54292502 + MGP_NODShiLtJ_P0077122 Ccdc126 protein_coding protein_coding MGP_NODShiLtJ_T0077123.1 MGP_NODShiLtJ_G0030527.1 mouse_genomes_project 6 54269431 54292498 + MGP_NODShiLtJ_P0077123 Ccdc126 protein_coding protein_coding MGP_NODShiLtJ_T0002032.1 MGP_NODShiLtJ_G0001944.1 mouse_genomes_project 6 101862686 101866944 + TEC TEC MGP_NODShiLtJ_T0098442.1 MGP_NODShiLtJ_G0036843.1 mouse_genomes_project 6 163320885 163323179 - Sox5it sense_intronic sense_intronic MGP_NODShiLtJ_T0078469.1 MGP_NODShiLtJ_G0030827.1 mouse_genomes_project 6 101240042 101240975 + MGP_NODShiLtJ_P0078469 Vmn1r40 protein_coding protein_coding MGP_NODShiLtJ_T0011527.1 MGP_NODShiLtJ_G0009660.1 mouse_genomes_project 6 50585077 50585381 + Gm22839 misc_RNA misc_RNA MGP_NODShiLtJ_T0079997.1 MGP_NODShiLtJ_G0031131.1 mouse_genomes_project 6 144478140 144512014 + MGP_NODShiLtJ_P0079997 protein_coding protein_coding MGP_NODShiLtJ_T0015509.1 MGP_NODShiLtJ_G0013617.1 mouse_genomes_project 6 151106618 151106947 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097819.1 MGP_NODShiLtJ_G0036231.1 mouse_genomes_project 6 52253232 52253777 - pseudogene pseudogene MGP_NODShiLtJ_T0008641.1 MGP_NODShiLtJ_G0006976.1 mouse_genomes_project 6 133088250 133090008 - 1700069P05Rik lincRNA lincRNA MGP_NODShiLtJ_T0001910.1 MGP_NODShiLtJ_G0001822.1 mouse_genomes_project 6 42276509 42277726 - TEC TEC MGP_NODShiLtJ_T0015346.1 MGP_NODShiLtJ_G0013454.1 mouse_genomes_project 6 96285042 96285184 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079473.1 MGP_NODShiLtJ_G0031018.1 mouse_genomes_project 6 136294095 136307697 + MGP_NODShiLtJ_P0079473 Pex26 protein_coding protein_coding MGP_NODShiLtJ_T0079474.1 MGP_NODShiLtJ_G0031018.1 mouse_genomes_project 6 136294095 136307704 + MGP_NODShiLtJ_P0079474 Pex26 protein_coding protein_coding MGP_NODShiLtJ_T0079475.1 MGP_NODShiLtJ_G0031018.1 mouse_genomes_project 6 136294230 136297870 + MGP_NODShiLtJ_P0079475 Pex26 protein_coding protein_coding MGP_NODShiLtJ_T0079476.1 MGP_NODShiLtJ_G0031018.1 mouse_genomes_project 6 136294317 136307697 + MGP_NODShiLtJ_P0079476 Pex26 protein_coding protein_coding MGP_NODShiLtJ_T0079477.1 MGP_NODShiLtJ_G0031018.1 mouse_genomes_project 6 136294326 136297510 + Pex26 protein_coding retained_intron MGP_NODShiLtJ_T0079478.1 MGP_NODShiLtJ_G0031018.1 mouse_genomes_project 6 136294326 136310333 + MGP_NODShiLtJ_P0079478 Pex26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076811.1 MGP_NODShiLtJ_G0030439.1 mouse_genomes_project 6 45154049 45155336 + MGP_NODShiLtJ_P0076811 1700034O15Rik protein_coding protein_coding MGP_NODShiLtJ_T0002007.1 MGP_NODShiLtJ_G0001919.1 mouse_genomes_project 6 98020430 98022787 - TEC TEC MGP_NODShiLtJ_T0080268.1 MGP_NODShiLtJ_G0031229.1 mouse_genomes_project 6 152803091 152804370 - MGP_NODShiLtJ_P0080268 Pbp2 protein_coding protein_coding MGP_NODShiLtJ_T0015337.1 MGP_NODShiLtJ_G0013445.1 mouse_genomes_project 6 94649559 94650379 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001959.1 MGP_NODShiLtJ_G0001871.1 mouse_genomes_project 6 80057644 80060507 + TEC TEC MGP_NODShiLtJ_T0101997.1 MGP_NODShiLtJ_G0040165.1 mouse_genomes_project 6 63610976 63611478 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000163.1 MGP_NODShiLtJ_G0000119.1 mouse_genomes_project 6 76297604 76298091 - MGP_NODShiLtJ_P0000163 Igkv9-123 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0078813.1 MGP_NODShiLtJ_G0030905.1 mouse_genomes_project 6 121823809 121836845 + MGP_NODShiLtJ_P0078813 Setmar protein_coding protein_coding MGP_NODShiLtJ_T0078814.1 MGP_NODShiLtJ_G0030905.1 mouse_genomes_project 6 121823826 121836845 + MGP_NODShiLtJ_P0078814 Setmar protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011516.1 MGP_NODShiLtJ_G0009649.1 mouse_genomes_project 6 17101111 17101295 + Gm27960 misc_RNA misc_RNA MGP_NODShiLtJ_T0078671.1 MGP_NODShiLtJ_G0030877.1 mouse_genomes_project 6 108220385 108222129 - MGP_NODShiLtJ_P0078671 1700123L14Rik protein_coding protein_coding MGP_NODShiLtJ_T0015328.1 MGP_NODShiLtJ_G0013436.1 mouse_genomes_project 6 89330502 89331211 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004977.1 MGP_NODShiLtJ_G0004250.1 mouse_genomes_project 6 102268117 102269216 + Gm44123 antisense antisense MGP_NODShiLtJ_T0080693.1 MGP_NODShiLtJ_G0031308.1 mouse_genomes_project 6 165809710 165817527 + Mrps35 protein_coding retained_intron MGP_NODShiLtJ_T0080694.1 MGP_NODShiLtJ_G0031308.1 mouse_genomes_project 6 165809710 165841079 + MGP_NODShiLtJ_P0080694 Mrps35 protein_coding protein_coding MGP_NODShiLtJ_T0080695.1 MGP_NODShiLtJ_G0031308.1 mouse_genomes_project 6 165811537 165823053 + MGP_NODShiLtJ_P0080695 Mrps35 protein_coding protein_coding MGP_NODShiLtJ_T0080696.1 MGP_NODShiLtJ_G0031308.1 mouse_genomes_project 6 165827408 165837927 + Mrps35 protein_coding processed_transcript MGP_NODShiLtJ_T0080697.1 MGP_NODShiLtJ_G0031308.1 mouse_genomes_project 6 165828428 165838006 + Mrps35 protein_coding processed_transcript MGP_NODShiLtJ_T0008604.1 MGP_NODShiLtJ_G0006946.1 mouse_genomes_project 6 103225448 103231730 + Gm45218 lincRNA lincRNA MGP_NODShiLtJ_T0015184.1 MGP_NODShiLtJ_G0013292.1 mouse_genomes_project 6 42849776 42850292 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002517.1 MGP_NODShiLtJ_G0002419.1 mouse_genomes_project 6 44995159 44995204 + Trbj1-7 TR_J_gene processed_transcript MGP_NODShiLtJ_T0002518.1 MGP_NODShiLtJ_G0002419.1 mouse_genomes_project 6 44995159 44995205 + MGP_NODShiLtJ_P0002518 Trbj1-7 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0001912.1 MGP_NODShiLtJ_G0001824.1 mouse_genomes_project 6 43337951 43340499 + TEC TEC MGP_NODShiLtJ_T0015512.1 MGP_NODShiLtJ_G0013620.1 mouse_genomes_project 6 152270730 152271139 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015247.1 MGP_NODShiLtJ_G0013355.1 mouse_genomes_project 6 64455534 64455964 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076457.1 MGP_NODShiLtJ_G0030355.1 mouse_genomes_project 6 33245603 33248649 - MGP_NODShiLtJ_P0076457 Klf14 protein_coding protein_coding MGP_NODShiLtJ_T0002689.1 MGP_NODShiLtJ_G0002562.1 mouse_genomes_project 6 44540077 44540371 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0008633.1 MGP_NODShiLtJ_G0006970.1 mouse_genomes_project 6 132195376 132198417 - Gm4640 lincRNA lincRNA MGP_NODShiLtJ_T0102010.1 MGP_NODShiLtJ_G0040178.1 mouse_genomes_project 6 70231282 70231613 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0078969.1 MGP_NODShiLtJ_G0030931.1 mouse_genomes_project 6 127926757 127932393 + MGP_NODShiLtJ_P0078969 Jagn1 protein_coding protein_coding MGP_NODShiLtJ_T0078970.1 MGP_NODShiLtJ_G0030931.1 mouse_genomes_project 6 127926783 127929200 + Jagn1 protein_coding retained_intron MGP_NODShiLtJ_T0078971.1 MGP_NODShiLtJ_G0030931.1 mouse_genomes_project 6 127926798 127932373 + MGP_NODShiLtJ_P0078971 Jagn1 protein_coding protein_coding MGP_NODShiLtJ_T0077029.1 MGP_NODShiLtJ_G0030503.1 mouse_genomes_project 6 53488435 53513415 + MGP_NODShiLtJ_P0077029 Gm45021 protein_coding protein_coding MGP_NODShiLtJ_T0078985.1 MGP_NODShiLtJ_G0030934.1 mouse_genomes_project 6 127967615 127981082 + MGP_NODShiLtJ_P0078985 Creld1 protein_coding protein_coding MGP_NODShiLtJ_T0078986.1 MGP_NODShiLtJ_G0030934.1 mouse_genomes_project 6 127969965 127975783 + Creld1 protein_coding retained_intron MGP_NODShiLtJ_T0078987.1 MGP_NODShiLtJ_G0030934.1 mouse_genomes_project 6 127970397 127974952 + Creld1 protein_coding retained_intron MGP_NODShiLtJ_T0078988.1 MGP_NODShiLtJ_G0030934.1 mouse_genomes_project 6 127974037 127976269 + Creld1 protein_coding retained_intron MGP_NODShiLtJ_T0078989.1 MGP_NODShiLtJ_G0030934.1 mouse_genomes_project 6 127979760 127981087 + Creld1 protein_coding retained_intron MGP_NODShiLtJ_T0078990.1 MGP_NODShiLtJ_G0030934.1 mouse_genomes_project 6 127979762 127981079 + Creld1 protein_coding retained_intron MGP_NODShiLtJ_T0004874.1 MGP_NODShiLtJ_G0004181.1 mouse_genomes_project 6 37273637 37281778 - Gm14547 antisense antisense MGP_NODShiLtJ_T0015446.1 MGP_NODShiLtJ_G0013554.1 mouse_genomes_project 6 136698107 136698495 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008502.1 MGP_NODShiLtJ_G0006865.1 mouse_genomes_project 6 47876729 47880583 - Gm35216 lincRNA lincRNA MGP_NODShiLtJ_T0079605.1 MGP_NODShiLtJ_G0031053.1 mouse_genomes_project 6 139644167 139670346 + MGP_NODShiLtJ_P0079605 protein_coding protein_coding MGP_NODShiLtJ_T0099420.1 MGP_NODShiLtJ_G0037814.1 mouse_genomes_project 6 32155489 32155596 + Gm24536 snRNA snRNA MGP_NODShiLtJ_T0005045.1 MGP_NODShiLtJ_G0004301.1 mouse_genomes_project 6 151628707 151639280 - Gm17089 antisense antisense MGP_NODShiLtJ_T0078652.1 MGP_NODShiLtJ_G0030872.1 mouse_genomes_project 6 106512480 106609700 - MGP_NODShiLtJ_P0078652 Lrig1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078653.1 MGP_NODShiLtJ_G0030872.1 mouse_genomes_project 6 106512485 106609687 - MGP_NODShiLtJ_P0078653 Lrig1 protein_coding protein_coding MGP_NODShiLtJ_T0078654.1 MGP_NODShiLtJ_G0030872.1 mouse_genomes_project 6 106512487 106609679 - MGP_NODShiLtJ_P0078654 Lrig1 protein_coding protein_coding MGP_NODShiLtJ_T0078655.1 MGP_NODShiLtJ_G0030872.1 mouse_genomes_project 6 106512631 106513345 - Lrig1 protein_coding processed_transcript MGP_NODShiLtJ_T0078656.1 MGP_NODShiLtJ_G0030872.1 mouse_genomes_project 6 106532417 106590179 - Lrig1 protein_coding processed_transcript MGP_NODShiLtJ_T0078657.1 MGP_NODShiLtJ_G0030872.1 mouse_genomes_project 6 106533844 106563428 - Lrig1 protein_coding processed_transcript MGP_NODShiLtJ_T0078658.1 MGP_NODShiLtJ_G0030872.1 mouse_genomes_project 6 106535473 106588393 - Lrig1 protein_coding processed_transcript MGP_NODShiLtJ_T0079745.1 MGP_NODShiLtJ_G0031082.1 mouse_genomes_project 6 140685873 140693529 - MGP_NODShiLtJ_P0079745 Lag3 protein_coding protein_coding MGP_NODShiLtJ_T0079746.1 MGP_NODShiLtJ_G0031082.1 mouse_genomes_project 6 140689986 140691433 - Lag3 protein_coding processed_transcript MGP_NODShiLtJ_T0076847.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45797699 45825671 + MGP_NODShiLtJ_P0076847 Clcn1 protein_coding protein_coding MGP_NODShiLtJ_T0076848.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45797781 45825193 + MGP_NODShiLtJ_P0076848 Clcn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076849.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45797870 45825244 + MGP_NODShiLtJ_P0076849 Clcn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076850.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45797870 45825193 + MGP_NODShiLtJ_P0076850 Clcn1 protein_coding protein_coding MGP_NODShiLtJ_T0076851.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45797870 45825193 + MGP_NODShiLtJ_P0076851 Clcn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076852.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45797870 45825193 + MGP_NODShiLtJ_P0076852 Clcn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076853.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45797880 45824972 + MGP_NODShiLtJ_P0076853 Clcn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076854.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45809914 45826771 + Clcn1 protein_coding processed_transcript MGP_NODShiLtJ_T0076855.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45821159 45824079 + MGP_NODShiLtJ_P0076855 Clcn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076856.1 MGP_NODShiLtJ_G0030452.1 mouse_genomes_project 6 45823506 45824359 + Clcn1 protein_coding retained_intron MGP_NODShiLtJ_T0015278.1 MGP_NODShiLtJ_G0013386.1 mouse_genomes_project 6 73698923 73699310 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079417.1 MGP_NODShiLtJ_G0031008.1 mouse_genomes_project 6 135410150 135472259 + MGP_NODShiLtJ_P0079417 Kdm5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079418.1 MGP_NODShiLtJ_G0031008.1 mouse_genomes_project 6 135410150 135498058 + MGP_NODShiLtJ_P0079418 Kdm5a protein_coding protein_coding MGP_NODShiLtJ_T0079419.1 MGP_NODShiLtJ_G0031008.1 mouse_genomes_project 6 135410158 135415633 + Kdm5a protein_coding retained_intron MGP_NODShiLtJ_T0079420.1 MGP_NODShiLtJ_G0031008.1 mouse_genomes_project 6 135410484 135472232 + MGP_NODShiLtJ_P0079420 Kdm5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0079421.1 MGP_NODShiLtJ_G0031008.1 mouse_genomes_project 6 135421478 135437690 + MGP_NODShiLtJ_P0079421 Kdm5a protein_coding protein_coding MGP_NODShiLtJ_T0079422.1 MGP_NODShiLtJ_G0031008.1 mouse_genomes_project 6 135458644 135466634 + Kdm5a protein_coding retained_intron MGP_NODShiLtJ_T0079423.1 MGP_NODShiLtJ_G0031008.1 mouse_genomes_project 6 135479930 135483681 + Kdm5a protein_coding retained_intron MGP_NODShiLtJ_T0079424.1 MGP_NODShiLtJ_G0031008.1 mouse_genomes_project 6 135483602 135493195 + Kdm5a protein_coding processed_transcript MGP_NODShiLtJ_T0000171.1 MGP_NODShiLtJ_G0000125.1 mouse_genomes_project 6 76868287 76868734 + MGP_NODShiLtJ_P0000171 Igkv20-101-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0001941.1 MGP_NODShiLtJ_G0001853.1 mouse_genomes_project 6 57463495 57464737 - TEC TEC MGP_NODShiLtJ_T0008548.1 MGP_NODShiLtJ_G0006902.1 mouse_genomes_project 6 77824473 77824711 - Rprl1 lincRNA lincRNA MGP_NODShiLtJ_T0076878.1 MGP_NODShiLtJ_G0030461.1 mouse_genomes_project 6 46010729 46012533 - MGP_NODShiLtJ_P0076878 Olfr456 protein_coding protein_coding MGP_NODShiLtJ_T0015300.1 MGP_NODShiLtJ_G0013408.1 mouse_genomes_project 6 75983119 75984466 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015522.1 MGP_NODShiLtJ_G0013630.1 mouse_genomes_project 6 158234858 158235272 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0004858.1 MGP_NODShiLtJ_G0004168.1 mouse_genomes_project 6 30232054 30295687 + 6530409C15Rik antisense antisense MGP_NODShiLtJ_T0004859.1 MGP_NODShiLtJ_G0004168.1 mouse_genomes_project 6 30232075 30237289 + 6530409C15Rik antisense antisense MGP_NODShiLtJ_T0005062.1 MGP_NODShiLtJ_G0004316.1 mouse_genomes_project 6 163120528 163142379 + Sox5os2 antisense antisense MGP_NODShiLtJ_T0080170.1 MGP_NODShiLtJ_G0031196.1 mouse_genomes_project 6 149794076 149795006 + MGP_NODShiLtJ_P0080170 Tas2r124 protein_coding protein_coding MGP_NODShiLtJ_T0099414.1 MGP_NODShiLtJ_G0037808.1 mouse_genomes_project 6 18317554 18317661 + Gm23648 snRNA snRNA MGP_NODShiLtJ_T0076735.1 MGP_NODShiLtJ_G0030408.1 mouse_genomes_project 6 42774478 42786132 + MGP_NODShiLtJ_P0076735 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0001867.1 MGP_NODShiLtJ_G0001779.1 mouse_genomes_project 6 1438136 1439928 + TEC TEC MGP_NODShiLtJ_T0078692.1 MGP_NODShiLtJ_G0030883.1 mouse_genomes_project 6 109368811 109384454 - MGP_NODShiLtJ_P0078692 Lmod3 protein_coding protein_coding MGP_NODShiLtJ_T0000194.1 MGP_NODShiLtJ_G0000141.1 mouse_genomes_project 6 78396400 78396989 - MGP_NODShiLtJ_P0000194 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0077876.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054601 94057889 + MGP_NODShiLtJ_P0077876 Aup1 protein_coding protein_coding MGP_NODShiLtJ_T0077877.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054726 94057767 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077878.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054794 94056466 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077879.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054809 94056436 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077880.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054811 94055250 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077881.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054811 94057759 + MGP_NODShiLtJ_P0077881 Aup1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077882.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054816 94056515 + MGP_NODShiLtJ_P0077882 Aup1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077883.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054818 94055596 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077884.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054828 94057763 + MGP_NODShiLtJ_P0077884 Aup1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077885.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94054835 94056369 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077886.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94055471 94056198 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077887.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94055794 94056394 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077888.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94056490 94057725 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077889.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94056592 94056918 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077890.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94056928 94057474 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077891.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94056933 94057763 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0077892.1 MGP_NODShiLtJ_G0030720.1 mouse_genomes_project 6 94057301 94057757 + Aup1 protein_coding retained_intron MGP_NODShiLtJ_T0076691.1 MGP_NODShiLtJ_G0030400.1 mouse_genomes_project 6 42013051 42096727 + MGP_NODShiLtJ_P0076691 Tbxas1 protein_coding protein_coding MGP_NODShiLtJ_T0076692.1 MGP_NODShiLtJ_G0030400.1 mouse_genomes_project 6 42062714 42231670 + MGP_NODShiLtJ_P0076692 Tbxas1 protein_coding protein_coding MGP_NODShiLtJ_T0076693.1 MGP_NODShiLtJ_G0030400.1 mouse_genomes_project 6 42062739 42176420 + Tbxas1 protein_coding retained_intron MGP_NODShiLtJ_T0076694.1 MGP_NODShiLtJ_G0030400.1 mouse_genomes_project 6 42062758 42231670 + Tbxas1 protein_coding retained_intron MGP_NODShiLtJ_T0076695.1 MGP_NODShiLtJ_G0030400.1 mouse_genomes_project 6 42085071 42145893 + MGP_NODShiLtJ_P0076695 Tbxas1 protein_coding protein_coding MGP_NODShiLtJ_T0076696.1 MGP_NODShiLtJ_G0030400.1 mouse_genomes_project 6 42115612 42127264 + Tbxas1 protein_coding processed_transcript MGP_NODShiLtJ_T0076697.1 MGP_NODShiLtJ_G0030400.1 mouse_genomes_project 6 42127047 42220297 + Tbxas1 protein_coding retained_intron MGP_NODShiLtJ_T0075846.1 MGP_NODShiLtJ_G0030238.1 mouse_genomes_project 6 1709578 1723632 + MGP_NODShiLtJ_P0075846 protein_coding protein_coding MGP_NODShiLtJ_T0075847.1 MGP_NODShiLtJ_G0030238.1 mouse_genomes_project 6 1709578 1723635 + MGP_NODShiLtJ_P0075847 protein_coding protein_coding MGP_NODShiLtJ_T0075848.1 MGP_NODShiLtJ_G0030238.1 mouse_genomes_project 6 1709678 1723635 + MGP_NODShiLtJ_P0075848 protein_coding protein_coding MGP_NODShiLtJ_T0079809.1 MGP_NODShiLtJ_G0031091.1 mouse_genomes_project 6 140897022 140933415 + MGP_NODShiLtJ_P0079809 Chd4 protein_coding protein_coding MGP_NODShiLtJ_T0079810.1 MGP_NODShiLtJ_G0031091.1 mouse_genomes_project 6 140897022 140933409 + MGP_NODShiLtJ_P0079810 Chd4 protein_coding protein_coding MGP_NODShiLtJ_T0079811.1 MGP_NODShiLtJ_G0031091.1 mouse_genomes_project 6 140899014 140933415 + MGP_NODShiLtJ_P0079811 Chd4 protein_coding protein_coding MGP_NODShiLtJ_T0079812.1 MGP_NODShiLtJ_G0031091.1 mouse_genomes_project 6 140899029 140900270 + Chd4 protein_coding retained_intron MGP_NODShiLtJ_T0079813.1 MGP_NODShiLtJ_G0031091.1 mouse_genomes_project 6 140899467 140903403 + MGP_NODShiLtJ_P0079813 Chd4 protein_coding protein_coding MGP_NODShiLtJ_T0079814.1 MGP_NODShiLtJ_G0031091.1 mouse_genomes_project 6 140916255 140917336 + Chd4 protein_coding retained_intron MGP_NODShiLtJ_T0079815.1 MGP_NODShiLtJ_G0031091.1 mouse_genomes_project 6 140916283 140924624 + MGP_NODShiLtJ_P0079815 Chd4 protein_coding protein_coding MGP_NODShiLtJ_T0079816.1 MGP_NODShiLtJ_G0031091.1 mouse_genomes_project 6 140922443 140923547 + Chd4 protein_coding retained_intron MGP_NODShiLtJ_T0008426.1 MGP_NODShiLtJ_G0006817.1 mouse_genomes_project 6 3658395 3684047 + Gm20685 lincRNA lincRNA MGP_NODShiLtJ_T0080195.1 MGP_NODShiLtJ_G0031214.1 mouse_genomes_project 6 151795687 151839742 + MGP_NODShiLtJ_P0080195 Bcl2l14 protein_coding protein_coding MGP_NODShiLtJ_T0080196.1 MGP_NODShiLtJ_G0031214.1 mouse_genomes_project 6 151795714 151802740 + Bcl2l14 protein_coding processed_transcript MGP_NODShiLtJ_T0080197.1 MGP_NODShiLtJ_G0031214.1 mouse_genomes_project 6 151798023 151839730 + MGP_NODShiLtJ_P0080197 Bcl2l14 protein_coding protein_coding MGP_NODShiLtJ_T0080198.1 MGP_NODShiLtJ_G0031214.1 mouse_genomes_project 6 151798035 151823325 + MGP_NODShiLtJ_P0080198 Bcl2l14 protein_coding protein_coding MGP_NODShiLtJ_T0080199.1 MGP_NODShiLtJ_G0031214.1 mouse_genomes_project 6 151813826 151839121 + MGP_NODShiLtJ_P0080199 Bcl2l14 protein_coding protein_coding MGP_NODShiLtJ_T0080200.1 MGP_NODShiLtJ_G0031214.1 mouse_genomes_project 6 151813863 151827817 + Bcl2l14 protein_coding retained_intron MGP_NODShiLtJ_T0101369.1 MGP_NODShiLtJ_G0039590.1 mouse_genomes_project 6 139492588 139539565 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101370.1 MGP_NODShiLtJ_G0039590.1 mouse_genomes_project 6 139514193 139535433 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0080173.1 MGP_NODShiLtJ_G0031199.1 mouse_genomes_project 6 149865377 149866468 + MGP_NODShiLtJ_P0080173 Tas2r117 protein_coding protein_coding MGP_NODShiLtJ_T0077306.1 MGP_NODShiLtJ_G0030569.1 mouse_genomes_project 6 60212091 60296483 + MGP_NODShiLtJ_P0077306 protein_coding protein_coding MGP_NODShiLtJ_T0077307.1 MGP_NODShiLtJ_G0030569.1 mouse_genomes_project 6 60213497 60288094 + MGP_NODShiLtJ_P0077307 protein_coding protein_coding MGP_NODShiLtJ_T0011509.1 MGP_NODShiLtJ_G0009642.1 mouse_genomes_project 6 3997796 3997976 + Gm27699 misc_RNA misc_RNA MGP_NODShiLtJ_T0077499.1 MGP_NODShiLtJ_G0030633.1 mouse_genomes_project 6 72581402 72583523 + MGP_NODShiLtJ_P0077499 Atoh1 protein_coding protein_coding MGP_NODShiLtJ_T0008643.1 MGP_NODShiLtJ_G0006978.1 mouse_genomes_project 6 133140211 133148336 - Gm30498 lincRNA lincRNA MGP_NODShiLtJ_T0015214.1 MGP_NODShiLtJ_G0013322.1 mouse_genomes_project 6 53861937 53862267 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077042.1 MGP_NODShiLtJ_G0030507.1 mouse_genomes_project 6 53526880 53533805 + MGP_NODShiLtJ_P0077042 AI854703 protein_coding protein_coding MGP_NODShiLtJ_T0077043.1 MGP_NODShiLtJ_G0030507.1 mouse_genomes_project 6 53527337 53529579 + MGP_NODShiLtJ_P0077043 AI854703 protein_coding protein_coding MGP_NODShiLtJ_T0077044.1 MGP_NODShiLtJ_G0030507.1 mouse_genomes_project 6 53527395 53529579 + MGP_NODShiLtJ_P0077044 AI854703 protein_coding protein_coding MGP_NODShiLtJ_T0077045.1 MGP_NODShiLtJ_G0030507.1 mouse_genomes_project 6 53528049 53533809 + MGP_NODShiLtJ_P0077045 AI854703 protein_coding protein_coding MGP_NODShiLtJ_T0002512.1 MGP_NODShiLtJ_G0002415.1 mouse_genomes_project 6 44993840 44993894 + Trbj1-3 TR_J_gene processed_transcript MGP_NODShiLtJ_T0002513.1 MGP_NODShiLtJ_G0002415.1 mouse_genomes_project 6 44993840 44993890 + MGP_NODShiLtJ_P0002513 Trbj1-3 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0008621.1 MGP_NODShiLtJ_G0006958.1 mouse_genomes_project 6 114432931 114439787 + Gm44176 lincRNA lincRNA MGP_NODShiLtJ_T0100679.1 MGP_NODShiLtJ_G0039073.1 mouse_genomes_project 6 76179970 76180110 - Gm25910 snoRNA snoRNA MGP_NODShiLtJ_T0075992.1 MGP_NODShiLtJ_G0030270.1 mouse_genomes_project 6 12456664 12460429 - MGP_NODShiLtJ_P0075992 2610001J05Rik protein_coding protein_coding MGP_NODShiLtJ_T0075993.1 MGP_NODShiLtJ_G0030270.1 mouse_genomes_project 6 12458729 12460377 - MGP_NODShiLtJ_P0075993 2610001J05Rik protein_coding protein_coding MGP_NODShiLtJ_T0075994.1 MGP_NODShiLtJ_G0030270.1 mouse_genomes_project 6 12458789 12460376 - MGP_NODShiLtJ_P0075994 2610001J05Rik protein_coding protein_coding MGP_NODShiLtJ_T0075995.1 MGP_NODShiLtJ_G0030270.1 mouse_genomes_project 6 12458911 12460376 - MGP_NODShiLtJ_P0075995 2610001J05Rik protein_coding protein_coding MGP_NODShiLtJ_T0002624.1 MGP_NODShiLtJ_G0002507.1 mouse_genomes_project 6 44389344 44390000 + MGP_NODShiLtJ_P0002624 Trbv2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0008451.1 MGP_NODShiLtJ_G0006835.1 mouse_genomes_project 6 31072577 31125577 + Gm3294 lincRNA lincRNA MGP_NODShiLtJ_T0077434.1 MGP_NODShiLtJ_G0030613.1 mouse_genomes_project 6 63682994 63683991 - MGP_NODShiLtJ_P0077434 Vmn1r23 protein_coding protein_coding MGP_NODShiLtJ_T0015289.1 MGP_NODShiLtJ_G0013397.1 mouse_genomes_project 6 75115485 75115872 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002127.1 MGP_NODShiLtJ_G0002039.1 mouse_genomes_project 6 159672731 159676544 + TEC TEC MGP_NODShiLtJ_T0080321.1 MGP_NODShiLtJ_G0031243.1 mouse_genomes_project 6 154574165 154590235 - MGP_NODShiLtJ_P0080321 Erp27 protein_coding protein_coding MGP_NODShiLtJ_T0080322.1 MGP_NODShiLtJ_G0031243.1 mouse_genomes_project 6 154576617 154590235 - Erp27 protein_coding retained_intron MGP_NODShiLtJ_T0080323.1 MGP_NODShiLtJ_G0031243.1 mouse_genomes_project 6 154587721 154590195 - Erp27 protein_coding retained_intron MGP_NODShiLtJ_T0080162.1 MGP_NODShiLtJ_G0031190.1 mouse_genomes_project 6 149534671 149535491 + MGP_NODShiLtJ_P0080162 Prp2 protein_coding protein_coding MGP_NODShiLtJ_T0000292.1 MGP_NODShiLtJ_G0000230.1 mouse_genomes_project 6 76755123 76755590 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0077323.1 MGP_NODShiLtJ_G0030573.1 mouse_genomes_project 6 60507582 60535316 - MGP_NODShiLtJ_P0077323 Crhr2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0077324.1 MGP_NODShiLtJ_G0030573.1 mouse_genomes_project 6 60507592 60551520 - MGP_NODShiLtJ_P0077324 Crhr2 protein_coding protein_coding MGP_NODShiLtJ_T0077325.1 MGP_NODShiLtJ_G0030573.1 mouse_genomes_project 6 60508728 60535530 - MGP_NODShiLtJ_P0077325 Crhr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077326.1 MGP_NODShiLtJ_G0030573.1 mouse_genomes_project 6 60508755 60535458 - MGP_NODShiLtJ_P0077326 Crhr2 protein_coding protein_coding MGP_NODShiLtJ_T0077327.1 MGP_NODShiLtJ_G0030573.1 mouse_genomes_project 6 60509562 60551347 - MGP_NODShiLtJ_P0077327 Crhr2 protein_coding protein_coding MGP_NODShiLtJ_T0077328.1 MGP_NODShiLtJ_G0030573.1 mouse_genomes_project 6 60510500 60518111 - Crhr2 protein_coding retained_intron MGP_NODShiLtJ_T0077329.1 MGP_NODShiLtJ_G0030573.1 mouse_genomes_project 6 60516164 60551522 - Crhr2 protein_coding retained_intron MGP_NODShiLtJ_T0077330.1 MGP_NODShiLtJ_G0030573.1 mouse_genomes_project 6 60522287 60535316 - Crhr2 protein_coding retained_intron MGP_NODShiLtJ_T0100691.1 MGP_NODShiLtJ_G0039085.1 mouse_genomes_project 6 102448048 102448144 + Gm25185 snoRNA snoRNA MGP_NODShiLtJ_T0102034.1 MGP_NODShiLtJ_G0040201.1 mouse_genomes_project 6 146539783 146550932 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102052.1 MGP_NODShiLtJ_G0040219.1 mouse_genomes_project 6 150968326 150970288 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002142.1 MGP_NODShiLtJ_G0002054.1 mouse_genomes_project 6 167731207 167732868 + TEC TEC MGP_NODShiLtJ_T0015423.1 MGP_NODShiLtJ_G0013531.1 mouse_genomes_project 6 128684018 128684658 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015118.1 MGP_NODShiLtJ_G0013226.1 mouse_genomes_project 6 4386392 4387478 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015385.1 MGP_NODShiLtJ_G0013493.1 mouse_genomes_project 6 112598624 112658342 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080224.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152305338 152335965 - MGP_NODShiLtJ_P0080224 Gpr19 protein_coding protein_coding MGP_NODShiLtJ_T0080225.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152305338 152335855 - MGP_NODShiLtJ_P0080225 Gpr19 protein_coding protein_coding MGP_NODShiLtJ_T0080226.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152305353 152335898 - MGP_NODShiLtJ_P0080226 Gpr19 protein_coding protein_coding MGP_NODShiLtJ_T0080227.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152305402 152324149 - MGP_NODShiLtJ_P0080227 Gpr19 protein_coding protein_coding MGP_NODShiLtJ_T0080228.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152305407 152335903 - MGP_NODShiLtJ_P0080228 Gpr19 protein_coding protein_coding MGP_NODShiLtJ_T0080229.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152306282 152335865 - MGP_NODShiLtJ_P0080229 Gpr19 protein_coding protein_coding MGP_NODShiLtJ_T0080230.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152306453 152335855 - MGP_NODShiLtJ_P0080230 Gpr19 protein_coding protein_coding MGP_NODShiLtJ_T0080231.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152306494 152324085 - MGP_NODShiLtJ_P0080231 Gpr19 protein_coding protein_coding MGP_NODShiLtJ_T0080232.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152313488 152335927 - Gpr19 protein_coding processed_transcript MGP_NODShiLtJ_T0080233.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152323207 152335127 - Gpr19 protein_coding processed_transcript MGP_NODShiLtJ_T0080234.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152323967 152336608 - Gpr19 protein_coding processed_transcript MGP_NODShiLtJ_T0080235.1 MGP_NODShiLtJ_G0031220.1 mouse_genomes_project 6 152334740 152335965 - Gpr19 protein_coding processed_transcript MGP_NODShiLtJ_T0008574.1 MGP_NODShiLtJ_G0006923.1 mouse_genomes_project 6 95562851 95573751 - Gm10445 lincRNA lincRNA MGP_NODShiLtJ_T0015251.1 MGP_NODShiLtJ_G0013359.1 mouse_genomes_project 6 65304033 65304237 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002627.1 MGP_NODShiLtJ_G0002510.1 mouse_genomes_project 6 44404110 44404582 + MGP_NODShiLtJ_P0002627 Trbv5 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0015190.1 MGP_NODShiLtJ_G0013298.1 mouse_genomes_project 6 44623572 44624016 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002632.1 MGP_NODShiLtJ_G0002514.1 mouse_genomes_project 6 44472582 44473019 + MGP_NODShiLtJ_P0002632 Trbv13-2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002057.1 MGP_NODShiLtJ_G0001969.1 mouse_genomes_project 6 113226717 113228795 + TEC TEC MGP_NODShiLtJ_T0008536.1 MGP_NODShiLtJ_G0006891.1 mouse_genomes_project 6 60826322 60842869 + 6430584L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0002039.1 MGP_NODShiLtJ_G0001951.1 mouse_genomes_project 6 103335006 103336682 - TEC TEC MGP_NODShiLtJ_T0005031.1 MGP_NODShiLtJ_G0004290.1 mouse_genomes_project 6 143103259 143105338 + antisense antisense MGP_NODShiLtJ_T0015436.1 MGP_NODShiLtJ_G0013544.1 mouse_genomes_project 6 132251217 132251638 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0079077.1 MGP_NODShiLtJ_G0030950.1 mouse_genomes_project 6 129396737 129411164 - Vgll4 protein_coding processed_transcript MGP_NODShiLtJ_T0079078.1 MGP_NODShiLtJ_G0030950.1 mouse_genomes_project 6 129397533 129459773 - MGP_NODShiLtJ_P0079078 Vgll4 protein_coding protein_coding MGP_NODShiLtJ_T0079079.1 MGP_NODShiLtJ_G0030950.1 mouse_genomes_project 6 129398300 129411077 - Vgll4 protein_coding processed_transcript MGP_NODShiLtJ_T0079080.1 MGP_NODShiLtJ_G0030950.1 mouse_genomes_project 6 129398300 129400867 - Vgll4 protein_coding processed_transcript MGP_NODShiLtJ_T0079081.1 MGP_NODShiLtJ_G0030950.1 mouse_genomes_project 6 129398430 129508557 - MGP_NODShiLtJ_P0079081 Vgll4 protein_coding protein_coding MGP_NODShiLtJ_T0079082.1 MGP_NODShiLtJ_G0030950.1 mouse_genomes_project 6 129398873 129509371 - MGP_NODShiLtJ_P0079082 Vgll4 protein_coding protein_coding MGP_NODShiLtJ_T0079083.1 MGP_NODShiLtJ_G0030950.1 mouse_genomes_project 6 129458005 129459768 - Vgll4 protein_coding retained_intron MGP_NODShiLtJ_T0101168.1 MGP_NODShiLtJ_G0039492.1 mouse_genomes_project 6 36943555 36970620 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101169.1 MGP_NODShiLtJ_G0039492.1 mouse_genomes_project 6 36943716 36967948 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101170.1 MGP_NODShiLtJ_G0039492.1 mouse_genomes_project 6 36967916 36968089 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101171.1 MGP_NODShiLtJ_G0039492.1 mouse_genomes_project 6 36968356 36970621 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0010687.1 MGP_NODShiLtJ_G0008820.1 mouse_genomes_project 6 121145683 121145809 - Gm27690 miRNA miRNA MGP_NODShiLtJ_T0076946.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52336999 52409208 - MGP_NODShiLtJ_P0076946 Ezh2 protein_coding protein_coding MGP_NODShiLtJ_T0076947.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52336999 52349024 - MGP_NODShiLtJ_P0076947 Ezh2 protein_coding protein_coding MGP_NODShiLtJ_T0076948.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52336999 52409208 - MGP_NODShiLtJ_P0076948 Ezh2 protein_coding protein_coding MGP_NODShiLtJ_T0076949.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52336999 52409208 - MGP_NODShiLtJ_P0076949 Ezh2 protein_coding protein_coding MGP_NODShiLtJ_T0076950.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52337179 52338977 - Ezh2 protein_coding retained_intron MGP_NODShiLtJ_T0076951.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52337401 52389202 - MGP_NODShiLtJ_P0076951 Ezh2 protein_coding protein_coding MGP_NODShiLtJ_T0076952.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52338870 52341986 - Ezh2 protein_coding retained_intron MGP_NODShiLtJ_T0076953.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52339490 52348998 - Ezh2 protein_coding retained_intron MGP_NODShiLtJ_T0076954.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52340602 52354172 - Ezh2 protein_coding retained_intron MGP_NODShiLtJ_T0076955.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52349131 52360420 - MGP_NODShiLtJ_P0076955 Ezh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076956.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52352294 52360420 - MGP_NODShiLtJ_P0076956 Ezh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076957.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52354071 52362943 - MGP_NODShiLtJ_P0076957 Ezh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076958.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52354124 52409236 - MGP_NODShiLtJ_P0076958 Ezh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076959.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52361042 52409519 - MGP_NODShiLtJ_P0076959 Ezh2 protein_coding protein_coding MGP_NODShiLtJ_T0076960.1 MGP_NODShiLtJ_G0030487.1 mouse_genomes_project 6 52364754 52389549 - Ezh2 protein_coding processed_transcript MGP_NODShiLtJ_T0005071.1 MGP_NODShiLtJ_G0004324.1 mouse_genomes_project 6 164694358 164700245 - Sspnos antisense antisense MGP_NODShiLtJ_T0018136.1 MGP_NODShiLtJ_G0015506.1 mouse_genomes_project 6 81538021 81543923 + Gm20536 processed_transcript processed_transcript MGP_NODShiLtJ_T0008682.1 MGP_NODShiLtJ_G0007007.1 mouse_genomes_project 6 157731362 157733292 - Gm44272 lincRNA lincRNA MGP_NODShiLtJ_T0077583.1 MGP_NODShiLtJ_G0030656.1 mouse_genomes_project 6 79492858 79525845 - MGP_NODShiLtJ_P0077583 Rpia protein_coding protein_coding MGP_NODShiLtJ_T0077584.1 MGP_NODShiLtJ_G0030656.1 mouse_genomes_project 6 79512492 79525616 - Rpia protein_coding retained_intron MGP_NODShiLtJ_T0004928.1 MGP_NODShiLtJ_G0004223.1 mouse_genomes_project 6 93738999 93742006 + Gm17034 antisense antisense MGP_NODShiLtJ_T0076423.1 MGP_NODShiLtJ_G0030350.1 mouse_genomes_project 6 32893311 32899457 + MGP_NODShiLtJ_P0076423 Cpa1 protein_coding protein_coding MGP_NODShiLtJ_T0076424.1 MGP_NODShiLtJ_G0030350.1 mouse_genomes_project 6 32894434 32895968 + Cpa1 protein_coding retained_intron MGP_NODShiLtJ_T0000190.1 MGP_NODShiLtJ_G0000138.1 mouse_genomes_project 6 77987622 77988158 - MGP_NODShiLtJ_P0000190 Igkv4-53 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000191.1 MGP_NODShiLtJ_G0000138.1 mouse_genomes_project 6 77987622 77987910 - MGP_NODShiLtJ_P0000191 Igkv4-53 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0002119.1 MGP_NODShiLtJ_G0002031.1 mouse_genomes_project 6 154862672 154863727 - TEC TEC MGP_NODShiLtJ_T0004878.1 MGP_NODShiLtJ_G0004185.1 mouse_genomes_project 6 42267642 42299510 + 4930599N23Rik antisense antisense MGP_NODShiLtJ_T0000302.1 MGP_NODShiLtJ_G0000240.1 mouse_genomes_project 6 77354046 77354447 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0011534.1 MGP_NODShiLtJ_G0009667.1 mouse_genomes_project 6 57366857 57367000 + Gm27477 misc_RNA misc_RNA MGP_NODShiLtJ_T0002034.1 MGP_NODShiLtJ_G0001946.1 mouse_genomes_project 6 102083045 102083558 + TEC TEC MGP_NODShiLtJ_T0102003.1 MGP_NODShiLtJ_G0040171.1 mouse_genomes_project 6 64060817 64065916 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015399.1 MGP_NODShiLtJ_G0013507.1 mouse_genomes_project 6 118937019 118937327 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076128.1 MGP_NODShiLtJ_G0030291.1 mouse_genomes_project 6 22895399 22900561 + MGP_NODShiLtJ_P0076128 Wnt16 protein_coding protein_coding MGP_NODShiLtJ_T0076129.1 MGP_NODShiLtJ_G0030291.1 mouse_genomes_project 6 22895402 22905503 + MGP_NODShiLtJ_P0076129 Wnt16 protein_coding protein_coding MGP_NODShiLtJ_T0076130.1 MGP_NODShiLtJ_G0030291.1 mouse_genomes_project 6 22895460 22901567 + MGP_NODShiLtJ_P0076130 Wnt16 protein_coding protein_coding MGP_NODShiLtJ_T0076131.1 MGP_NODShiLtJ_G0030291.1 mouse_genomes_project 6 22896033 22904808 + MGP_NODShiLtJ_P0076131 Wnt16 protein_coding protein_coding MGP_NODShiLtJ_T0005574.1 MGP_NODShiLtJ_G0004689.1 mouse_genomes_project 6 154080384 154084362 - Gm44140 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0004961.1 MGP_NODShiLtJ_G0004238.1 mouse_genomes_project 6 98669498 98671504 + Gm44418 antisense antisense MGP_NODShiLtJ_T0015228.1 MGP_NODShiLtJ_G0013336.1 mouse_genomes_project 6 55839568 55840694 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077854.1 MGP_NODShiLtJ_G0030716.1 mouse_genomes_project 6 93940131 94028750 + MGP_NODShiLtJ_P0077854 M1ap protein_coding protein_coding MGP_NODShiLtJ_T0077855.1 MGP_NODShiLtJ_G0030716.1 mouse_genomes_project 6 94024910 94028876 + MGP_NODShiLtJ_P0077855 M1ap protein_coding protein_coding MGP_NODShiLtJ_T0077856.1 MGP_NODShiLtJ_G0030716.1 mouse_genomes_project 6 94026828 94028390 + M1ap protein_coding retained_intron MGP_NODShiLtJ_T0077456.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64904868 64918268 + MGP_NODShiLtJ_P0077456 Herc3 protein_coding protein_coding MGP_NODShiLtJ_T0077457.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64904906 64918254 + MGP_NODShiLtJ_P0077457 Herc3 protein_coding protein_coding MGP_NODShiLtJ_T0077458.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64904927 64929278 + MGP_NODShiLtJ_P0077458 Herc3 protein_coding protein_coding MGP_NODShiLtJ_T0077459.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64905151 64929282 + MGP_NODShiLtJ_P0077459 Herc3 protein_coding protein_coding MGP_NODShiLtJ_T0077460.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64905264 64978237 + MGP_NODShiLtJ_P0077460 Herc3 protein_coding protein_coding MGP_NODShiLtJ_T0077461.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64907103 64996192 + MGP_NODShiLtJ_P0077461 Herc3 protein_coding protein_coding MGP_NODShiLtJ_T0077462.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64937126 64947904 + Herc3 protein_coding retained_intron MGP_NODShiLtJ_T0077463.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64948501 64949201 + Herc3 protein_coding processed_transcript MGP_NODShiLtJ_T0077464.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64964253 64976696 + MGP_NODShiLtJ_P0077464 Herc3 protein_coding protein_coding MGP_NODShiLtJ_T0077465.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64975892 64979574 + Herc3 protein_coding retained_intron MGP_NODShiLtJ_T0077468.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64982326 64992617 + Herc3 protein_coding processed_transcript MGP_NODShiLtJ_T0077469.1 MGP_NODShiLtJ_G0030623.1 mouse_genomes_project 6 64985568 64996194 + MGP_NODShiLtJ_P0077469 Herc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0078853.1 MGP_NODShiLtJ_G0030914.1 mouse_genomes_project 6 126864722 126878072 + MGP_NODShiLtJ_P0078853 Cav3 protein_coding protein_coding MGP_NODShiLtJ_T0010712.1 MGP_NODShiLtJ_G0008845.1 mouse_genomes_project 6 151133381 151133462 - Gm22801 miRNA miRNA MGP_NODShiLtJ_T0101996.1 MGP_NODShiLtJ_G0040164.1 mouse_genomes_project 6 62977787 62978676 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100722.1 MGP_NODShiLtJ_G0039116.1 mouse_genomes_project 6 162036445 162036574 - Gm23272 snoRNA snoRNA MGP_NODShiLtJ_T0001997.1 MGP_NODShiLtJ_G0001909.1 mouse_genomes_project 6 94076594 94078127 - TEC TEC MGP_NODShiLtJ_T0015183.1 MGP_NODShiLtJ_G0013291.1 mouse_genomes_project 6 41437590 41438013 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015460.1 MGP_NODShiLtJ_G0013568.1 mouse_genomes_project 6 139439397 139440247 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077210.1 MGP_NODShiLtJ_G0030549.1 mouse_genomes_project 6 57412570 57414987 - MGP_NODShiLtJ_P0077210 Hoxa6 protein_coding protein_coding MGP_NODShiLtJ_T0004946.1 MGP_NODShiLtJ_G0004231.1 mouse_genomes_project 6 95212015 95226453 - Gm15475 antisense antisense MGP_NODShiLtJ_T0075953.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10008095 10041728 + MGP_NODShiLtJ_P0075953 Phf14 protein_coding protein_coding MGP_NODShiLtJ_T0075954.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10008170 10064041 + MGP_NODShiLtJ_P0075954 Phf14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075955.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10032599 10141266 + MGP_NODShiLtJ_P0075955 Phf14 protein_coding protein_coding MGP_NODShiLtJ_T0075956.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10032633 10141334 + MGP_NODShiLtJ_P0075956 Phf14 protein_coding protein_coding MGP_NODShiLtJ_T0075957.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10032634 10253551 + MGP_NODShiLtJ_P0075957 Phf14 protein_coding protein_coding MGP_NODShiLtJ_T0075958.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10032901 10199250 + MGP_NODShiLtJ_P0075958 Phf14 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0075959.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10033501 10119040 + MGP_NODShiLtJ_P0075959 Phf14 protein_coding protein_coding MGP_NODShiLtJ_T0075960.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10119645 10121733 + Phf14 protein_coding retained_intron MGP_NODShiLtJ_T0075961.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10123948 10128272 + Phf14 protein_coding retained_intron MGP_NODShiLtJ_T0075962.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10140072 10253446 + MGP_NODShiLtJ_P0075962 Phf14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075963.1 MGP_NODShiLtJ_G0030263.1 mouse_genomes_project 6 10196018 10208482 + Phf14 protein_coding retained_intron MGP_NODShiLtJ_T0005037.1 MGP_NODShiLtJ_G0004295.1 mouse_genomes_project 6 144458955 144461521 + Gm26770 antisense antisense MGP_NODShiLtJ_T0000288.1 MGP_NODShiLtJ_G0000226.1 mouse_genomes_project 6 76533751 76534054 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0076883.1 MGP_NODShiLtJ_G0030464.1 mouse_genomes_project 6 46148961 46177352 - MGP_NODShiLtJ_P0076883 Tcaf2 protein_coding protein_coding MGP_NODShiLtJ_T0076884.1 MGP_NODShiLtJ_G0030464.1 mouse_genomes_project 6 46152355 46155386 - Tcaf2 protein_coding retained_intron MGP_NODShiLtJ_T0077030.1 MGP_NODShiLtJ_G0030504.1 mouse_genomes_project 6 53493504 53498685 + MGP_NODShiLtJ_P0077030 Repin1 protein_coding protein_coding MGP_NODShiLtJ_T0077031.1 MGP_NODShiLtJ_G0030504.1 mouse_genomes_project 6 53493504 53498685 + MGP_NODShiLtJ_P0077031 Repin1 protein_coding protein_coding MGP_NODShiLtJ_T0077032.1 MGP_NODShiLtJ_G0030504.1 mouse_genomes_project 6 53493504 53497010 + MGP_NODShiLtJ_P0077032 Repin1 protein_coding protein_coding MGP_NODShiLtJ_T0077033.1 MGP_NODShiLtJ_G0030504.1 mouse_genomes_project 6 53493512 53498686 + MGP_NODShiLtJ_P0077033 Repin1 protein_coding protein_coding MGP_NODShiLtJ_T0077034.1 MGP_NODShiLtJ_G0030504.1 mouse_genomes_project 6 53493521 53498685 + MGP_NODShiLtJ_P0077034 Repin1 protein_coding protein_coding MGP_NODShiLtJ_T0077035.1 MGP_NODShiLtJ_G0030504.1 mouse_genomes_project 6 53493561 53494956 + Repin1 protein_coding retained_intron MGP_NODShiLtJ_T0077038.1 MGP_NODShiLtJ_G0030504.1 mouse_genomes_project 6 53493941 53496246 + Repin1 protein_coding retained_intron MGP_NODShiLtJ_T0078838.1 MGP_NODShiLtJ_G0030910.1 mouse_genomes_project 6 122637488 122678141 + MGP_NODShiLtJ_P0078838 Edem1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0078839.1 MGP_NODShiLtJ_G0030910.1 mouse_genomes_project 6 122637521 122678133 + MGP_NODShiLtJ_P0078839 Edem1 protein_coding protein_coding MGP_NODShiLtJ_T0078840.1 MGP_NODShiLtJ_G0030910.1 mouse_genomes_project 6 122644974 122655500 + Edem1 protein_coding processed_transcript MGP_NODShiLtJ_T0078841.1 MGP_NODShiLtJ_G0030910.1 mouse_genomes_project 6 122665319 122669280 + Edem1 protein_coding retained_intron MGP_NODShiLtJ_T0078842.1 MGP_NODShiLtJ_G0030910.1 mouse_genomes_project 6 122670028 122674310 + Edem1 protein_coding retained_intron MGP_NODShiLtJ_T0010699.1 MGP_NODShiLtJ_G0008832.1 mouse_genomes_project 6 135893841 135893938 - Gm25193 miRNA miRNA MGP_NODShiLtJ_T0100694.1 MGP_NODShiLtJ_G0039088.1 mouse_genomes_project 6 105714752 105714888 + Gm22840 snoRNA snoRNA MGP_NODShiLtJ_T0077027.1 MGP_NODShiLtJ_G0030502.1 mouse_genomes_project 6 53488270 53489374 + MGP_NODShiLtJ_P0077027 protein_coding protein_coding MGP_NODShiLtJ_T0077028.1 MGP_NODShiLtJ_G0030502.1 mouse_genomes_project 6 53488413 53489308 + protein_coding retained_intron MGP_NODShiLtJ_T0076790.1 MGP_NODShiLtJ_G0030427.1 mouse_genomes_project 6 44248187 44267906 - MGP_NODShiLtJ_P0076790 1700074P13Rik protein_coding protein_coding MGP_NODShiLtJ_T0076791.1 MGP_NODShiLtJ_G0030427.1 mouse_genomes_project 6 44248210 44267966 - MGP_NODShiLtJ_P0076791 1700074P13Rik protein_coding protein_coding MGP_NODShiLtJ_T0076792.1 MGP_NODShiLtJ_G0030427.1 mouse_genomes_project 6 44249524 44257434 - MGP_NODShiLtJ_P0076792 1700074P13Rik protein_coding protein_coding MGP_NODShiLtJ_T0080172.1 MGP_NODShiLtJ_G0031198.1 mouse_genomes_project 6 149833159 149834143 - MGP_NODShiLtJ_P0080172 Tas2r136 protein_coding protein_coding MGP_NODShiLtJ_T0000298.1 MGP_NODShiLtJ_G0000236.1 mouse_genomes_project 6 77053561 77054259 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0080208.1 MGP_NODShiLtJ_G0031217.1 mouse_genomes_project 6 152062544 152133325 + MGP_NODShiLtJ_P0080208 Borcs5 protein_coding protein_coding MGP_NODShiLtJ_T0080209.1 MGP_NODShiLtJ_G0031217.1 mouse_genomes_project 6 152064010 152134142 + MGP_NODShiLtJ_P0080209 Borcs5 protein_coding protein_coding MGP_NODShiLtJ_T0080210.1 MGP_NODShiLtJ_G0031217.1 mouse_genomes_project 6 152064031 152069206 + Borcs5 protein_coding retained_intron MGP_NODShiLtJ_T0080211.1 MGP_NODShiLtJ_G0031217.1 mouse_genomes_project 6 152064325 152111599 + Borcs5 protein_coding retained_intron MGP_NODShiLtJ_T0080212.1 MGP_NODShiLtJ_G0031217.1 mouse_genomes_project 6 152124742 152133425 + Borcs5 protein_coding processed_transcript MGP_NODShiLtJ_T0080004.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144513973 144532620 - MGP_NODShiLtJ_P0080004 Itfg2 protein_coding protein_coding MGP_NODShiLtJ_T0080005.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144514027 144514901 - MGP_NODShiLtJ_P0080005 Itfg2 protein_coding protein_coding MGP_NODShiLtJ_T0080006.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144514062 144532607 - MGP_NODShiLtJ_P0080006 Itfg2 protein_coding protein_coding MGP_NODShiLtJ_T0080007.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144514732 144532558 - MGP_NODShiLtJ_P0080007 Itfg2 protein_coding protein_coding MGP_NODShiLtJ_T0080008.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144514778 144515206 - Itfg2 protein_coding retained_intron MGP_NODShiLtJ_T0080009.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144516108 144520284 - Itfg2 protein_coding retained_intron MGP_NODShiLtJ_T0080010.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144517529 144532601 - MGP_NODShiLtJ_P0080010 Itfg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080011.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144518162 144532602 - MGP_NODShiLtJ_P0080011 Itfg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080012.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144521538 144532619 - Itfg2 protein_coding retained_intron MGP_NODShiLtJ_T0080013.1 MGP_NODShiLtJ_G0031133.1 mouse_genomes_project 6 144529418 144532607 - Itfg2 protein_coding retained_intron MGP_NODShiLtJ_T0015314.1 MGP_NODShiLtJ_G0013422.1 mouse_genomes_project 6 80940201 80941301 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076176.1 MGP_NODShiLtJ_G0030304.1 mouse_genomes_project 6 25554289 25561994 + MGP_NODShiLtJ_P0076176 Lmod2 protein_coding protein_coding MGP_NODShiLtJ_T0076837.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45776007 45793531 + MGP_NODShiLtJ_P0076837 Casp2 protein_coding protein_coding MGP_NODShiLtJ_T0076838.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45776078 45780145 + Casp2 protein_coding retained_intron MGP_NODShiLtJ_T0076839.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45776142 45791515 + MGP_NODShiLtJ_P0076839 Casp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0076840.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45778413 45779053 + Casp2 protein_coding processed_transcript MGP_NODShiLtJ_T0076841.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45779032 45780630 + Casp2 protein_coding retained_intron MGP_NODShiLtJ_T0076842.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45780307 45790920 + Casp2 protein_coding processed_transcript MGP_NODShiLtJ_T0076843.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45787509 45791556 + Casp2 protein_coding retained_intron MGP_NODShiLtJ_T0076844.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45790659 45791513 + Casp2 protein_coding processed_transcript MGP_NODShiLtJ_T0076845.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45790803 45791664 + Casp2 protein_coding processed_transcript MGP_NODShiLtJ_T0076846.1 MGP_NODShiLtJ_G0030451.1 mouse_genomes_project 6 45790829 45791790 + Casp2 protein_coding processed_transcript MGP_NODShiLtJ_T0015472.1 MGP_NODShiLtJ_G0013580.1 mouse_genomes_project 6 143186746 143187618 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015438.1 MGP_NODShiLtJ_G0013546.1 mouse_genomes_project 6 132829787 132830573 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0077314.1 MGP_NODShiLtJ_G0030571.1 mouse_genomes_project 6 60395912 60406301 - MGP_NODShiLtJ_P0077314 Ggct protein_coding protein_coding MGP_NODShiLtJ_T0077315.1 MGP_NODShiLtJ_G0030571.1 mouse_genomes_project 6 60399005 60406058 - Ggct protein_coding processed_transcript MGP_NODShiLtJ_T0077316.1 MGP_NODShiLtJ_G0030571.1 mouse_genomes_project 6 60399289 60406212 - MGP_NODShiLtJ_P0077316 Ggct protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077317.1 MGP_NODShiLtJ_G0030571.1 mouse_genomes_project 6 60399313 60406214 - MGP_NODShiLtJ_P0077317 Ggct protein_coding protein_coding MGP_NODShiLtJ_T0077318.1 MGP_NODShiLtJ_G0030571.1 mouse_genomes_project 6 60399838 60406214 - Ggct protein_coding retained_intron MGP_NODShiLtJ_T0077319.1 MGP_NODShiLtJ_G0030571.1 mouse_genomes_project 6 60402476 60405975 - Ggct protein_coding retained_intron MGP_NODShiLtJ_T0077352.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61558893 61875334 - MGP_NODShiLtJ_P0077352 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077353.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61561601 62090954 - MGP_NODShiLtJ_P0077353 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077354.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61562211 61874797 - Pde1c protein_coding processed_transcript MGP_NODShiLtJ_T0077355.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61567644 61875461 - MGP_NODShiLtJ_P0077355 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077356.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61571724 61884719 - MGP_NODShiLtJ_P0077356 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077357.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61571839 61618805 - MGP_NODShiLtJ_P0077357 Pde1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077358.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61571892 61884738 - MGP_NODShiLtJ_P0077358 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077359.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61593008 61875253 - MGP_NODShiLtJ_P0077359 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077360.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61596570 61884767 - MGP_NODShiLtJ_P0077360 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077361.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61598280 61876742 - MGP_NODShiLtJ_P0077361 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077362.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61598734 61875308 - MGP_NODShiLtJ_P0077362 Pde1c protein_coding protein_coding MGP_NODShiLtJ_T0077363.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61679381 61875316 - Pde1c protein_coding retained_intron MGP_NODShiLtJ_T0077364.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61853723 61875255 - Pde1c protein_coding retained_intron MGP_NODShiLtJ_T0077365.1 MGP_NODShiLtJ_G0030582.1 mouse_genomes_project 6 61856940 61884740 - Pde1c protein_coding retained_intron MGP_NODShiLtJ_T0001960.1 MGP_NODShiLtJ_G0001872.1 mouse_genomes_project 6 80224717 80227716 - TEC TEC MGP_NODShiLtJ_T0076805.1 MGP_NODShiLtJ_G0030437.1 mouse_genomes_project 6 45086680 45105441 - MGP_NODShiLtJ_P0076805 Trpv6 protein_coding protein_coding MGP_NODShiLtJ_T0076806.1 MGP_NODShiLtJ_G0030437.1 mouse_genomes_project 6 45086683 45105441 - MGP_NODShiLtJ_P0076806 Trpv6 protein_coding protein_coding MGP_NODShiLtJ_T0076807.1 MGP_NODShiLtJ_G0030437.1 mouse_genomes_project 6 45087127 45105146 - MGP_NODShiLtJ_P0076807 Trpv6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0076808.1 MGP_NODShiLtJ_G0030437.1 mouse_genomes_project 6 45089551 45105416 - Trpv6 protein_coding retained_intron MGP_NODShiLtJ_T0015490.1 MGP_NODShiLtJ_G0013598.1 mouse_genomes_project 6 147424720 147426601 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080117.1 MGP_NODShiLtJ_G0031166.1 mouse_genomes_project 6 146178552 146198886 - MGP_NODShiLtJ_P0080117 Klri2 protein_coding protein_coding MGP_NODShiLtJ_T0077563.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75365145 75410747 + Serbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0077564.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406107 75446247 + MGP_NODShiLtJ_P0077564 Serbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077565.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406467 75424725 + MGP_NODShiLtJ_P0077565 Serbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077566.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406472 75408831 + Serbp1 protein_coding retained_intron MGP_NODShiLtJ_T0077567.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406489 75424485 + MGP_NODShiLtJ_P0077567 Serbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077568.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406494 75424461 + MGP_NODShiLtJ_P0077568 Serbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077569.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406495 75413487 + Serbp1 protein_coding retained_intron MGP_NODShiLtJ_T0077570.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406495 75424730 + MGP_NODShiLtJ_P0077570 Serbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077571.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406495 75424461 + MGP_NODShiLtJ_P0077571 Serbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077572.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406500 75414911 + Serbp1 protein_coding retained_intron MGP_NODShiLtJ_T0077573.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406522 75418072 + MGP_NODShiLtJ_P0077573 Serbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077574.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406555 75424428 + MGP_NODShiLtJ_P0077574 Serbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077575.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406563 75411715 + Serbp1 protein_coding retained_intron MGP_NODShiLtJ_T0077576.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406741 75412332 + MGP_NODShiLtJ_P0077576 Serbp1 protein_coding protein_coding MGP_NODShiLtJ_T0077577.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75406814 75422218 + MGP_NODShiLtJ_P0077577 Serbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0077578.1 MGP_NODShiLtJ_G0030652.1 mouse_genomes_project 6 75411353 75422235 + Serbp1 protein_coding retained_intron MGP_NODShiLtJ_T0079910.1 MGP_NODShiLtJ_G0031112.1 mouse_genomes_project 6 142799878 142828516 - MGP_NODShiLtJ_P0079910 Ndufa9 protein_coding protein_coding MGP_NODShiLtJ_T0079911.1 MGP_NODShiLtJ_G0031112.1 mouse_genomes_project 6 142800153 142828516 - MGP_NODShiLtJ_P0079911 Ndufa9 protein_coding protein_coding MGP_NODShiLtJ_T0079912.1 MGP_NODShiLtJ_G0031112.1 mouse_genomes_project 6 142823140 142828527 - Ndufa9 protein_coding retained_intron MGP_NODShiLtJ_T0075833.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1628676 1709449 - MGP_NODShiLtJ_P0075833 Sgce protein_coding protein_coding MGP_NODShiLtJ_T0075834.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1628676 1709477 - MGP_NODShiLtJ_P0075834 Sgce protein_coding protein_coding MGP_NODShiLtJ_T0075835.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1628680 1709480 - MGP_NODShiLtJ_P0075835 Sgce protein_coding protein_coding MGP_NODShiLtJ_T0075836.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1628680 1709430 - MGP_NODShiLtJ_P0075836 Sgce protein_coding protein_coding MGP_NODShiLtJ_T0075837.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1628710 1709389 - MGP_NODShiLtJ_P0075837 Sgce protein_coding protein_coding MGP_NODShiLtJ_T0075838.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1628744 1709461 - MGP_NODShiLtJ_P0075838 Sgce protein_coding protein_coding MGP_NODShiLtJ_T0075839.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1628744 1709397 - MGP_NODShiLtJ_P0075839 Sgce protein_coding protein_coding MGP_NODShiLtJ_T0075840.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1633384 1709430 - Sgce protein_coding retained_intron MGP_NODShiLtJ_T0075841.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1645634 1709353 - Sgce protein_coding retained_intron MGP_NODShiLtJ_T0075842.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1648450 1709343 - Sgce protein_coding processed_transcript MGP_NODShiLtJ_T0075843.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1648622 1709336 - MGP_NODShiLtJ_P0075843 Sgce protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0075844.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1665608 1669833 - Sgce protein_coding retained_intron MGP_NODShiLtJ_T0075845.1 MGP_NODShiLtJ_G0030237.1 mouse_genomes_project 6 1696114 1699180 - Sgce protein_coding retained_intron MGP_NODShiLtJ_T0076435.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 32991243 33011739 + MGP_NODShiLtJ_P0076435 Mest protein_coding protein_coding MGP_NODShiLtJ_T0076436.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 32991243 33000120 + MGP_NODShiLtJ_P0076436 Mest protein_coding protein_coding MGP_NODShiLtJ_T0076437.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 32999373 33011743 + MGP_NODShiLtJ_P0076437 Mest protein_coding protein_coding MGP_NODShiLtJ_T0076438.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 33000859 33012001 + MGP_NODShiLtJ_P0076438 Mest protein_coding protein_coding MGP_NODShiLtJ_T0076439.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 33000911 33017627 + MGP_NODShiLtJ_P0076439 Mest protein_coding protein_coding MGP_NODShiLtJ_T0076440.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 33005460 33017627 + MGP_NODShiLtJ_P0076440 Mest protein_coding protein_coding MGP_NODShiLtJ_T0076441.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 33005463 33017630 + MGP_NODShiLtJ_P0076441 Mest protein_coding protein_coding MGP_NODShiLtJ_T0076442.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 33005465 33006289 + Mest protein_coding processed_transcript MGP_NODShiLtJ_T0076443.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 33009946 33012307 + Mest protein_coding retained_intron MGP_NODShiLtJ_T0076444.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 33011240 33012305 + Mest protein_coding retained_intron MGP_NODShiLtJ_T0076445.1 MGP_NODShiLtJ_G0030352.1 mouse_genomes_project 6 33011253 33012315 + Mest protein_coding retained_intron MGP_NODShiLtJ_T0077048.1 MGP_NODShiLtJ_G0030509.1 mouse_genomes_project 6 53581523 53584923 + MGP_NODShiLtJ_P0077048 Gimap9 protein_coding protein_coding MGP_NODShiLtJ_T0077049.1 MGP_NODShiLtJ_G0030509.1 mouse_genomes_project 6 53583734 53585342 + MGP_NODShiLtJ_P0077049 Gimap9 protein_coding protein_coding MGP_NODShiLtJ_T0015489.1 MGP_NODShiLtJ_G0013597.1 mouse_genomes_project 6 147424536 147426506 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001993.1 MGP_NODShiLtJ_G0001905.1 mouse_genomes_project 6 91583293 91585958 + TEC TEC MGP_NODShiLtJ_T0098208.1 MGP_NODShiLtJ_G0036620.1 mouse_genomes_project 6 58287454 58287593 - Gm26215 scaRNA scaRNA MGP_NODShiLtJ_T0077404.1 MGP_NODShiLtJ_G0030600.1 mouse_genomes_project 6 62993839 62994874 - MGP_NODShiLtJ_P0077404 Vmn1r16 protein_coding protein_coding MGP_NODShiLtJ_T0018080.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517317 33639646 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018081.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517317 33639615 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018082.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517317 33639489 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018083.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517323 33639634 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018084.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517371 33639627 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018085.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517371 33639619 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018086.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517388 33639552 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018087.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517388 33629955 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018088.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517401 33639639 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018089.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517407 33639615 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018090.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33517413 33639642 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018091.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33579183 33594520 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018092.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33586331 33639645 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018093.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33593833 33594966 + 2210408F21Rik processed_transcript TEC MGP_NODShiLtJ_T0018094.1 MGP_NODShiLtJ_G0015491.1 mouse_genomes_project 6 33623652 33639627 + 2210408F21Rik processed_transcript lincRNA MGP_NODShiLtJ_T0002085.1 MGP_NODShiLtJ_G0001997.1 mouse_genomes_project 6 131887055 131887851 + TEC TEC MGP_NODShiLtJ_T0010642.1 MGP_NODShiLtJ_G0008775.1 mouse_genomes_project 6 19389251 19389371 + Mir6370 miRNA miRNA MGP_NODShiLtJ_T0076407.1 MGP_NODShiLtJ_G0030346.1 mouse_genomes_project 6 32757644 32768020 + MGP_NODShiLtJ_P0076407 Ssmem1 protein_coding protein_coding MGP_NODShiLtJ_T0076408.1 MGP_NODShiLtJ_G0030346.1 mouse_genomes_project 6 32760081 32768021 + MGP_NODShiLtJ_P0076408 Ssmem1 protein_coding protein_coding MGP_NODShiLtJ_T0076409.1 MGP_NODShiLtJ_G0030346.1 mouse_genomes_project 6 32761463 32767311 + MGP_NODShiLtJ_P0076409 Ssmem1 protein_coding protein_coding MGP_NODShiLtJ_T0000307.1 MGP_NODShiLtJ_G0000245.1 mouse_genomes_project 6 77843139 77843672 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0077603.1 MGP_NODShiLtJ_G0030663.1 mouse_genomes_project 6 80051645 80066423 + MGP_NODShiLtJ_P0077603 Krcc1 protein_coding protein_coding MGP_NODShiLtJ_T0077604.1 MGP_NODShiLtJ_G0030663.1 mouse_genomes_project 6 80053093 80066423 + MGP_NODShiLtJ_P0077604 Krcc1 protein_coding protein_coding MGP_NODShiLtJ_T0077605.1 MGP_NODShiLtJ_G0030663.1 mouse_genomes_project 6 80063436 80066422 + MGP_NODShiLtJ_P0077605 Krcc1 protein_coding protein_coding MGP_NODShiLtJ_T0076099.1 MGP_NODShiLtJ_G0030285.1 mouse_genomes_project 6 18444710 18450185 + MGP_NODShiLtJ_P0076099 Lsm8 protein_coding protein_coding MGP_NODShiLtJ_T0076100.1 MGP_NODShiLtJ_G0030285.1 mouse_genomes_project 6 18444772 18451883 + Lsm8 protein_coding retained_intron MGP_NODShiLtJ_T0076101.1 MGP_NODShiLtJ_G0030285.1 mouse_genomes_project 6 18444787 18446539 + Lsm8 protein_coding retained_intron MGP_NODShiLtJ_T0076102.1 MGP_NODShiLtJ_G0030285.1 mouse_genomes_project 6 18444799 18449879 + MGP_NODShiLtJ_P0076102 Lsm8 protein_coding protein_coding MGP_NODShiLtJ_T0015445.1 MGP_NODShiLtJ_G0013553.1 mouse_genomes_project 6 136683169 136683442 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015219.1 MGP_NODShiLtJ_G0013327.1 mouse_genomes_project 6 53993403 53993710 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0001917.1 MGP_NODShiLtJ_G0001829.1 mouse_genomes_project 6 49200251 49202372 + TEC TEC MGP_NODShiLtJ_T0015139.1 MGP_NODShiLtJ_G0013247.1 mouse_genomes_project 6 13070540 13071111 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0076908.1 MGP_NODShiLtJ_G0030477.1 mouse_genomes_project 6 46816611 46822269 + MGP_NODShiLtJ_P0076908 Olfr437 protein_coding protein_coding MGP_NODShiLtJ_T0076909.1 MGP_NODShiLtJ_G0030477.1 mouse_genomes_project 6 46821251 46822269 + MGP_NODShiLtJ_P0076909 Olfr437 protein_coding protein_coding MGP_NODShiLtJ_T0080240.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485547 152497496 + MGP_NODShiLtJ_P0080240 Ddx47 protein_coding protein_coding MGP_NODShiLtJ_T0080241.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485557 152492630 + MGP_NODShiLtJ_P0080241 Ddx47 protein_coding protein_coding MGP_NODShiLtJ_T0080242.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485559 152492594 + MGP_NODShiLtJ_P0080242 Ddx47 protein_coding protein_coding MGP_NODShiLtJ_T0080243.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485561 152490222 + Ddx47 protein_coding retained_intron MGP_NODShiLtJ_T0080244.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485567 152497492 + Ddx47 protein_coding retained_intron MGP_NODShiLtJ_T0080245.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485568 152491709 + MGP_NODShiLtJ_P0080245 Ddx47 protein_coding protein_coding MGP_NODShiLtJ_T0080246.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485570 152489219 + Ddx47 protein_coding retained_intron MGP_NODShiLtJ_T0080247.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485579 152495159 + MGP_NODShiLtJ_P0080247 Ddx47 protein_coding protein_coding MGP_NODShiLtJ_T0080248.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152485588 152495182 + MGP_NODShiLtJ_P0080248 Ddx47 protein_coding protein_coding MGP_NODShiLtJ_T0080249.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152488943 152492659 + Ddx47 protein_coding processed_transcript MGP_NODShiLtJ_T0080250.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152489414 152492127 + Ddx47 protein_coding retained_intron MGP_NODShiLtJ_T0080251.1 MGP_NODShiLtJ_G0031223.1 mouse_genomes_project 6 152492592 152497492 + MGP_NODShiLtJ_P0080251 Ddx47 protein_coding protein_coding MGP_NODShiLtJ_T0015243.1 MGP_NODShiLtJ_G0013351.1 mouse_genomes_project 6 63907347 63908519 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002051.1 MGP_NODShiLtJ_G0001963.1 mouse_genomes_project 6 109740140 109741813 - TEC TEC MGP_NODShiLtJ_T0015443.1 MGP_NODShiLtJ_G0013551.1 mouse_genomes_project 6 136223742 136225173 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008632.1 MGP_NODShiLtJ_G0006969.1 mouse_genomes_project 6 131904408 131906444 + D030044L04Rik lincRNA lincRNA MGP_NODShiLtJ_T0101166.1 MGP_NODShiLtJ_G0039491.1 mouse_genomes_project 6 10275185 10288462 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101167.1 MGP_NODShiLtJ_G0039491.1 mouse_genomes_project 6 10275377 10275937 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0079747.1 MGP_NODShiLtJ_G0031083.1 mouse_genomes_project 6 140695506 140699775 - MGP_NODShiLtJ_P0079747 Ptms protein_coding protein_coding MGP_NODShiLtJ_T0079748.1 MGP_NODShiLtJ_G0031083.1 mouse_genomes_project 6 140695513 140696503 - Ptms protein_coding processed_transcript MGP_NODShiLtJ_T0079749.1 MGP_NODShiLtJ_G0031083.1 mouse_genomes_project 6 140695589 140701927 - Ptms protein_coding processed_transcript MGP_NODShiLtJ_T0079750.1 MGP_NODShiLtJ_G0031083.1 mouse_genomes_project 6 140695874 140697053 - Ptms protein_coding retained_intron MGP_NODShiLtJ_T0079751.1 MGP_NODShiLtJ_G0031083.1 mouse_genomes_project 6 140696469 140697358 - Ptms protein_coding processed_transcript MGP_NODShiLtJ_T0011515.1 MGP_NODShiLtJ_G0009648.1 mouse_genomes_project 6 17100138 17100247 + Gm27762 misc_RNA misc_RNA MGP_NODShiLtJ_T0002189.1 MGP_NODShiLtJ_G0002101.1 mouse_genomes_project 7 60919863 60921190 - TEC TEC MGP_NODShiLtJ_T0102201.1 MGP_NODShiLtJ_G0040367.1 mouse_genomes_project 7 116306576 116306705 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081189.1 MGP_NODShiLtJ_G0031437.1 mouse_genomes_project 7 8415768 8418263 - MGP_NODShiLtJ_P0081189 Vmn1r69 protein_coding protein_coding MGP_NODShiLtJ_T0081190.1 MGP_NODShiLtJ_G0031437.1 mouse_genomes_project 7 8416701 8471219 - MGP_NODShiLtJ_P0081190 Vmn1r69 protein_coding protein_coding MGP_NODShiLtJ_T0081191.1 MGP_NODShiLtJ_G0031437.1 mouse_genomes_project 7 8416701 8471219 - MGP_NODShiLtJ_P0081191 Vmn1r69 protein_coding protein_coding MGP_NODShiLtJ_T0018180.1 MGP_NODShiLtJ_G0015524.1 mouse_genomes_project 7 27967957 27971179 - processed_transcript processed_transcript MGP_NODShiLtJ_T0081741.1 MGP_NODShiLtJ_G0031627.1 mouse_genomes_project 7 23637889 23659427 + MGP_NODShiLtJ_P0081741 protein_coding protein_coding MGP_NODShiLtJ_T0087078.1 MGP_NODShiLtJ_G0033006.1 mouse_genomes_project 7 157172967 157174471 - MGP_NODShiLtJ_P0087078 Cox8b protein_coding protein_coding MGP_NODShiLtJ_T0102127.1 MGP_NODShiLtJ_G0040293.1 mouse_genomes_project 7 44589449 44589691 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011588.1 MGP_NODShiLtJ_G0009721.1 mouse_genomes_project 7 159045071 159045142 + Gm27483 misc_RNA misc_RNA MGP_NODShiLtJ_T0085593.1 MGP_NODShiLtJ_G0032683.1 mouse_genomes_project 7 127384842 127387841 - MGP_NODShiLtJ_P0085593 Pth protein_coding protein_coding MGP_NODShiLtJ_T0082051.1 MGP_NODShiLtJ_G0031706.1 mouse_genomes_project 7 26952812 26963925 + MGP_NODShiLtJ_P0082051 Cyp2a4 protein_coding protein_coding MGP_NODShiLtJ_T0085041.1 MGP_NODShiLtJ_G0032412.1 mouse_genomes_project 7 114199095 114205370 - MGP_NODShiLtJ_P0085041 Chrna10 protein_coding protein_coding MGP_NODShiLtJ_T0015629.1 MGP_NODShiLtJ_G0013737.1 mouse_genomes_project 7 31946198 31946985 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082700.1 MGP_NODShiLtJ_G0031862.1 mouse_genomes_project 7 31573675 31578008 - MGP_NODShiLtJ_P0082700 Ffar1 protein_coding protein_coding MGP_NODShiLtJ_T0102156.1 MGP_NODShiLtJ_G0040322.1 mouse_genomes_project 7 51940679 51944749 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086938.1 MGP_NODShiLtJ_G0032956.1 mouse_genomes_project 7 155338496 155357277 + MGP_NODShiLtJ_P0086938 Pwwp2b protein_coding protein_coding MGP_NODShiLtJ_T0086939.1 MGP_NODShiLtJ_G0032956.1 mouse_genomes_project 7 155338496 155357277 + MGP_NODShiLtJ_P0086939 Pwwp2b protein_coding protein_coding MGP_NODShiLtJ_T0010789.1 MGP_NODShiLtJ_G0008922.1 mouse_genomes_project 7 70637730 70637836 + Mir211 miRNA miRNA MGP_NODShiLtJ_T0084950.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113717469 113778443 + Clpb protein_coding retained_intron MGP_NODShiLtJ_T0084951.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113717469 113848293 + MGP_NODShiLtJ_P0084951 Clpb protein_coding protein_coding MGP_NODShiLtJ_T0084952.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113717541 113845935 + MGP_NODShiLtJ_P0084952 Clpb protein_coding protein_coding MGP_NODShiLtJ_T0084953.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113717593 113742810 + Clpb protein_coding retained_intron MGP_NODShiLtJ_T0084954.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113717611 113761211 + MGP_NODShiLtJ_P0084954 Clpb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084955.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113717612 113845015 + Clpb protein_coding retained_intron MGP_NODShiLtJ_T0084956.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113735976 113821620 + MGP_NODShiLtJ_P0084956 Clpb protein_coding protein_coding MGP_NODShiLtJ_T0084957.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113737057 113808404 + MGP_NODShiLtJ_P0084957 Clpb protein_coding protein_coding MGP_NODShiLtJ_T0084958.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113821503 113827377 + Clpb protein_coding processed_transcript MGP_NODShiLtJ_T0084959.1 MGP_NODShiLtJ_G0032395.1 mouse_genomes_project 7 113821530 113843760 + Clpb protein_coding processed_transcript MGP_NODShiLtJ_T0015620.1 MGP_NODShiLtJ_G0013728.1 mouse_genomes_project 7 26939356 26941260 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002167.1 MGP_NODShiLtJ_G0002079.1 mouse_genomes_project 7 38744354 38745557 - TEC TEC MGP_NODShiLtJ_T0086887.1 MGP_NODShiLtJ_G0032945.1 mouse_genomes_project 7 153188459 153311727 - MGP_NODShiLtJ_P0086887 Ebf3 protein_coding protein_coding MGP_NODShiLtJ_T0086888.1 MGP_NODShiLtJ_G0032945.1 mouse_genomes_project 7 153188459 153311727 - MGP_NODShiLtJ_P0086888 Ebf3 protein_coding protein_coding MGP_NODShiLtJ_T0086889.1 MGP_NODShiLtJ_G0032945.1 mouse_genomes_project 7 153188459 153311727 - MGP_NODShiLtJ_P0086889 Ebf3 protein_coding protein_coding MGP_NODShiLtJ_T0086890.1 MGP_NODShiLtJ_G0032945.1 mouse_genomes_project 7 153189484 153311696 - MGP_NODShiLtJ_P0086890 Ebf3 protein_coding protein_coding MGP_NODShiLtJ_T0099504.1 MGP_NODShiLtJ_G0037898.1 mouse_genomes_project 7 108542486 108542595 - Gm22226 snRNA snRNA MGP_NODShiLtJ_T0010737.1 MGP_NODShiLtJ_G0008870.1 mouse_genomes_project 7 18777273 18777348 + Mir343 miRNA miRNA MGP_NODShiLtJ_T0102157.1 MGP_NODShiLtJ_G0040323.1 mouse_genomes_project 7 52050775 52051356 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098084.1 MGP_NODShiLtJ_G0036496.1 mouse_genomes_project 7 127077532 127077643 + Gm23662 rRNA rRNA MGP_NODShiLtJ_T0087128.1 MGP_NODShiLtJ_G0033022.1 mouse_genomes_project 7 157513696 157520457 + Lrrc56 protein_coding retained_intron MGP_NODShiLtJ_T0087129.1 MGP_NODShiLtJ_G0033022.1 mouse_genomes_project 7 157513913 157529983 + MGP_NODShiLtJ_P0087129 Lrrc56 protein_coding protein_coding MGP_NODShiLtJ_T0087130.1 MGP_NODShiLtJ_G0033022.1 mouse_genomes_project 7 157514660 157517801 + Lrrc56 protein_coding processed_transcript MGP_NODShiLtJ_T0087131.1 MGP_NODShiLtJ_G0033022.1 mouse_genomes_project 7 157516451 157519354 + Lrrc56 protein_coding processed_transcript MGP_NODShiLtJ_T0081415.1 MGP_NODShiLtJ_G0031520.1 mouse_genomes_project 7 15561939 15566500 - MGP_NODShiLtJ_P0081415 protein_coding protein_coding MGP_NODShiLtJ_T0015660.1 MGP_NODShiLtJ_G0013768.1 mouse_genomes_project 7 43212059 43212852 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002265.1 MGP_NODShiLtJ_G0002176.1 mouse_genomes_project 7 143069466 143072321 - TEC TEC MGP_NODShiLtJ_T0010735.1 MGP_NODShiLtJ_G0008868.1 mouse_genomes_project 7 18441983 18442048 + Mir3100 miRNA miRNA MGP_NODShiLtJ_T0080943.1 MGP_NODShiLtJ_G0031350.1 mouse_genomes_project 7 1176226 1178686 - MGP_NODShiLtJ_P0080943 Leng9 protein_coding protein_coding MGP_NODShiLtJ_T0102138.1 MGP_NODShiLtJ_G0040304.1 mouse_genomes_project 7 46789476 46789627 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082107.1 MGP_NODShiLtJ_G0031721.1 mouse_genomes_project 7 27579011 27601496 - MGP_NODShiLtJ_P0082107 Ltbp4 protein_coding protein_coding MGP_NODShiLtJ_T0083348.1 MGP_NODShiLtJ_G0032008.1 mouse_genomes_project 7 47760591 47767772 - MGP_NODShiLtJ_P0083348 Bcl2l12 protein_coding protein_coding MGP_NODShiLtJ_T0085655.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130395880 130405081 - MGP_NODShiLtJ_P0085655 Plekha7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085656.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130395882 130525881 - MGP_NODShiLtJ_P0085656 Plekha7 protein_coding protein_coding MGP_NODShiLtJ_T0085657.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130395890 130599800 - MGP_NODShiLtJ_P0085657 Plekha7 protein_coding protein_coding MGP_NODShiLtJ_T0085658.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130398426 130462709 - MGP_NODShiLtJ_P0085658 Plekha7 protein_coding protein_coding MGP_NODShiLtJ_T0085659.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130406204 130462986 - MGP_NODShiLtJ_P0085659 Plekha7 protein_coding protein_coding MGP_NODShiLtJ_T0085660.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130407342 130599779 - MGP_NODShiLtJ_P0085660 Plekha7 protein_coding protein_coding MGP_NODShiLtJ_T0085661.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130407439 130599757 - MGP_NODShiLtJ_P0085661 Plekha7 protein_coding protein_coding MGP_NODShiLtJ_T0085662.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130415144 130430294 - MGP_NODShiLtJ_P0085662 Plekha7 protein_coding protein_coding MGP_NODShiLtJ_T0085663.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130428470 130525735 - Plekha7 protein_coding retained_intron MGP_NODShiLtJ_T0085664.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130436534 130437470 - Plekha7 protein_coding retained_intron MGP_NODShiLtJ_T0085665.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130437846 130457897 - Plekha7 protein_coding processed_transcript MGP_NODShiLtJ_T0085666.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130444080 130546911 - MGP_NODShiLtJ_P0085666 Plekha7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085667.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130444203 130460382 - Plekha7 protein_coding processed_transcript MGP_NODShiLtJ_T0085668.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130449110 130599665 - MGP_NODShiLtJ_P0085668 Plekha7 protein_coding protein_coding MGP_NODShiLtJ_T0085669.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130450284 130599474 - Plekha7 protein_coding retained_intron MGP_NODShiLtJ_T0085670.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130450330 130454058 - Plekha7 protein_coding retained_intron MGP_NODShiLtJ_T0085671.1 MGP_NODShiLtJ_G0032697.1 mouse_genomes_project 7 130454625 130552861 - Plekha7 protein_coding processed_transcript MGP_NODShiLtJ_T0083656.1 MGP_NODShiLtJ_G0032091.1 mouse_genomes_project 7 49796291 49806811 + MGP_NODShiLtJ_P0083656 Ldha protein_coding protein_coding MGP_NODShiLtJ_T0083657.1 MGP_NODShiLtJ_G0032091.1 mouse_genomes_project 7 49800655 49810721 + MGP_NODShiLtJ_P0083657 Ldha protein_coding protein_coding MGP_NODShiLtJ_T0083658.1 MGP_NODShiLtJ_G0032091.1 mouse_genomes_project 7 49800659 49803862 + Ldha protein_coding processed_transcript MGP_NODShiLtJ_T0083659.1 MGP_NODShiLtJ_G0032091.1 mouse_genomes_project 7 49800659 49802962 + Ldha protein_coding retained_intron MGP_NODShiLtJ_T0083660.1 MGP_NODShiLtJ_G0032091.1 mouse_genomes_project 7 49800679 49806820 + MGP_NODShiLtJ_P0083660 Ldha protein_coding protein_coding MGP_NODShiLtJ_T0083661.1 MGP_NODShiLtJ_G0032091.1 mouse_genomes_project 7 49800913 49803868 + Ldha protein_coding processed_transcript MGP_NODShiLtJ_T0083662.1 MGP_NODShiLtJ_G0032091.1 mouse_genomes_project 7 49801947 49810720 + MGP_NODShiLtJ_P0083662 Ldha protein_coding protein_coding MGP_NODShiLtJ_T0083663.1 MGP_NODShiLtJ_G0032091.1 mouse_genomes_project 7 49802321 49805813 + Ldha protein_coding retained_intron MGP_NODShiLtJ_T0010820.1 MGP_NODShiLtJ_G0008953.1 mouse_genomes_project 7 143839730 143839855 - Gm24365 miRNA miRNA MGP_NODShiLtJ_T0102087.1 MGP_NODShiLtJ_G0040254.1 mouse_genomes_project 7 13130593 13131293 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085082.1 MGP_NODShiLtJ_G0032426.1 mouse_genomes_project 7 114729738 114730692 + MGP_NODShiLtJ_P0085082 Olfr552 protein_coding protein_coding MGP_NODShiLtJ_T0082271.1 MGP_NODShiLtJ_G0031766.1 mouse_genomes_project 7 28987106 28988432 + MGP_NODShiLtJ_P0082271 Sycn protein_coding protein_coding MGP_NODShiLtJ_T0018194.1 MGP_NODShiLtJ_G0015532.1 mouse_genomes_project 7 47756417 47761283 + Gm15545 processed_transcript processed_transcript MGP_NODShiLtJ_T0018195.1 MGP_NODShiLtJ_G0015532.1 mouse_genomes_project 7 47756444 47764790 + Gm15545 processed_transcript processed_transcript MGP_NODShiLtJ_T0018196.1 MGP_NODShiLtJ_G0015532.1 mouse_genomes_project 7 47756451 47760471 + Gm15545 processed_transcript processed_transcript MGP_NODShiLtJ_T0018197.1 MGP_NODShiLtJ_G0015532.1 mouse_genomes_project 7 47756490 47762521 + Gm15545 processed_transcript processed_transcript MGP_NODShiLtJ_T0018221.1 MGP_NODShiLtJ_G0015541.1 mouse_genomes_project 7 77409336 77461139 + processed_transcript antisense MGP_NODShiLtJ_T0018222.1 MGP_NODShiLtJ_G0015541.1 mouse_genomes_project 7 77434752 77461143 + processed_transcript retained_intron MGP_NODShiLtJ_T0018223.1 MGP_NODShiLtJ_G0015541.1 mouse_genomes_project 7 77434752 77451636 + processed_transcript antisense MGP_NODShiLtJ_T0018224.1 MGP_NODShiLtJ_G0015541.1 mouse_genomes_project 7 77436548 77437086 + processed_transcript processed_transcript MGP_NODShiLtJ_T0086768.1 MGP_NODShiLtJ_G0032914.1 mouse_genomes_project 7 147183665 147191504 + MGP_NODShiLtJ_P0086768 Hmx2 protein_coding protein_coding MGP_NODShiLtJ_T0086769.1 MGP_NODShiLtJ_G0032914.1 mouse_genomes_project 7 147188975 147191504 + MGP_NODShiLtJ_P0086769 Hmx2 protein_coding protein_coding MGP_NODShiLtJ_T0010751.1 MGP_NODShiLtJ_G0008884.1 mouse_genomes_project 7 30503539 30503599 + Mir7668 miRNA miRNA MGP_NODShiLtJ_T0085229.1 MGP_NODShiLtJ_G0032545.1 mouse_genomes_project 7 117957483 117958640 - MGP_NODShiLtJ_P0085229 protein_coding protein_coding MGP_NODShiLtJ_T0082850.1 MGP_NODShiLtJ_G0031891.1 mouse_genomes_project 7 35318544 35326527 - MGP_NODShiLtJ_P0082850 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082851.1 MGP_NODShiLtJ_G0031891.1 mouse_genomes_project 7 35318553 35349270 - MGP_NODShiLtJ_P0082851 protein_coding protein_coding MGP_NODShiLtJ_T0082852.1 MGP_NODShiLtJ_G0031891.1 mouse_genomes_project 7 35319454 35328559 - protein_coding retained_intron MGP_NODShiLtJ_T0082853.1 MGP_NODShiLtJ_G0031891.1 mouse_genomes_project 7 35319501 35326006 - MGP_NODShiLtJ_P0082853 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082854.1 MGP_NODShiLtJ_G0031891.1 mouse_genomes_project 7 35319753 35331631 - MGP_NODShiLtJ_P0082854 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082855.1 MGP_NODShiLtJ_G0031891.1 mouse_genomes_project 7 35319777 35323957 - MGP_NODShiLtJ_P0082855 protein_coding protein_coding MGP_NODShiLtJ_T0082856.1 MGP_NODShiLtJ_G0031891.1 mouse_genomes_project 7 35320378 35324374 - protein_coding retained_intron MGP_NODShiLtJ_T0082857.1 MGP_NODShiLtJ_G0031891.1 mouse_genomes_project 7 35333403 35349197 - protein_coding retained_intron MGP_NODShiLtJ_T0083366.1 MGP_NODShiLtJ_G0032018.1 mouse_genomes_project 7 47905896 47909077 - MGP_NODShiLtJ_P0083366 Rpl13a protein_coding protein_coding MGP_NODShiLtJ_T0087341.1 MGP_NODShiLtJ_G0033063.1 mouse_genomes_project 7 158907086 158909689 + MGP_NODShiLtJ_P0087341 Tnni2 protein_coding protein_coding MGP_NODShiLtJ_T0087342.1 MGP_NODShiLtJ_G0033063.1 mouse_genomes_project 7 158907094 158909315 + MGP_NODShiLtJ_P0087342 Tnni2 protein_coding protein_coding MGP_NODShiLtJ_T0087343.1 MGP_NODShiLtJ_G0033063.1 mouse_genomes_project 7 158907608 158909647 + MGP_NODShiLtJ_P0087343 Tnni2 protein_coding protein_coding MGP_NODShiLtJ_T0087344.1 MGP_NODShiLtJ_G0033063.1 mouse_genomes_project 7 158908186 158909687 + Tnni2 protein_coding retained_intron MGP_NODShiLtJ_T0087345.1 MGP_NODShiLtJ_G0033063.1 mouse_genomes_project 7 158908258 158909138 + Tnni2 protein_coding retained_intron MGP_NODShiLtJ_T0087346.1 MGP_NODShiLtJ_G0033063.1 mouse_genomes_project 7 158908449 158909684 + MGP_NODShiLtJ_P0087346 Tnni2 protein_coding protein_coding MGP_NODShiLtJ_T0081142.1 MGP_NODShiLtJ_G0031410.1 mouse_genomes_project 7 3660266 3685364 + MGP_NODShiLtJ_P0081142 Zfp667 protein_coding protein_coding MGP_NODShiLtJ_T0081143.1 MGP_NODShiLtJ_G0031410.1 mouse_genomes_project 7 3660280 3678275 + Zfp667 protein_coding processed_transcript MGP_NODShiLtJ_T0081144.1 MGP_NODShiLtJ_G0031410.1 mouse_genomes_project 7 3660301 3685343 + MGP_NODShiLtJ_P0081144 Zfp667 protein_coding protein_coding MGP_NODShiLtJ_T0081145.1 MGP_NODShiLtJ_G0031410.1 mouse_genomes_project 7 3663683 3685163 + MGP_NODShiLtJ_P0081145 Zfp667 protein_coding protein_coding MGP_NODShiLtJ_T0081146.1 MGP_NODShiLtJ_G0031410.1 mouse_genomes_project 7 3667020 3671207 + Zfp667 protein_coding retained_intron MGP_NODShiLtJ_T0015746.1 MGP_NODShiLtJ_G0013854.1 mouse_genomes_project 7 100330610 100331099 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085224.1 MGP_NODShiLtJ_G0032540.1 mouse_genomes_project 7 117822478 117823432 + MGP_NODShiLtJ_P0085224 Olfr676 protein_coding protein_coding MGP_NODShiLtJ_T0102090.1 MGP_NODShiLtJ_G0040257.1 mouse_genomes_project 7 13184389 13185319 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015740.1 MGP_NODShiLtJ_G0013848.1 mouse_genomes_project 7 93968168 93968814 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015587.1 MGP_NODShiLtJ_G0013695.1 mouse_genomes_project 7 14710652 14711612 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081886.1 MGP_NODShiLtJ_G0031665.1 mouse_genomes_project 7 24800245 24830747 - MGP_NODShiLtJ_P0081886 Atp1a3 protein_coding protein_coding MGP_NODShiLtJ_T0081887.1 MGP_NODShiLtJ_G0031665.1 mouse_genomes_project 7 24800245 24830810 - MGP_NODShiLtJ_P0081887 Atp1a3 protein_coding protein_coding MGP_NODShiLtJ_T0081888.1 MGP_NODShiLtJ_G0031665.1 mouse_genomes_project 7 24800248 24830795 - MGP_NODShiLtJ_P0081888 Atp1a3 protein_coding protein_coding MGP_NODShiLtJ_T0081889.1 MGP_NODShiLtJ_G0031665.1 mouse_genomes_project 7 24816651 24830759 - Atp1a3 protein_coding retained_intron MGP_NODShiLtJ_T0081890.1 MGP_NODShiLtJ_G0031665.1 mouse_genomes_project 7 24825408 24830809 - Atp1a3 protein_coding retained_intron MGP_NODShiLtJ_T0015783.1 MGP_NODShiLtJ_G0013891.1 mouse_genomes_project 7 135322434 135323285 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015616.1 MGP_NODShiLtJ_G0013724.1 mouse_genomes_project 7 25836547 25836919 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086046.1 MGP_NODShiLtJ_G0032782.1 mouse_genomes_project 7 141385584 141409576 + MGP_NODShiLtJ_P0086046 Sbk1 protein_coding protein_coding MGP_NODShiLtJ_T0086047.1 MGP_NODShiLtJ_G0032782.1 mouse_genomes_project 7 141386365 141404491 + MGP_NODShiLtJ_P0086047 Sbk1 protein_coding protein_coding MGP_NODShiLtJ_T0086048.1 MGP_NODShiLtJ_G0032782.1 mouse_genomes_project 7 141405639 141407380 + MGP_NODShiLtJ_P0086048 Sbk1 protein_coding protein_coding MGP_NODShiLtJ_T0018178.1 MGP_NODShiLtJ_G0015522.1 mouse_genomes_project 7 27511009 27522456 + Gm44641 processed_transcript processed_transcript MGP_NODShiLtJ_T0087089.1 MGP_NODShiLtJ_G0033009.1 mouse_genomes_project 7 157222977 157224254 - MGP_NODShiLtJ_P0087089 Ifitm5 protein_coding protein_coding MGP_NODShiLtJ_T0084525.1 MGP_NODShiLtJ_G0032297.1 mouse_genomes_project 7 96586022 96642431 + MGP_NODShiLtJ_P0084525 protein_coding protein_coding MGP_NODShiLtJ_T0083110.1 MGP_NODShiLtJ_G0031951.1 mouse_genomes_project 7 46139475 46144578 - MGP_NODShiLtJ_P0083110 Cd33 protein_coding protein_coding MGP_NODShiLtJ_T0083111.1 MGP_NODShiLtJ_G0031951.1 mouse_genomes_project 7 46140006 46144155 - MGP_NODShiLtJ_P0083111 Cd33 protein_coding protein_coding MGP_NODShiLtJ_T0083112.1 MGP_NODShiLtJ_G0031951.1 mouse_genomes_project 7 46140342 46144892 - MGP_NODShiLtJ_P0083112 Cd33 protein_coding protein_coding MGP_NODShiLtJ_T0083113.1 MGP_NODShiLtJ_G0031951.1 mouse_genomes_project 7 46141832 46144564 - Cd33 protein_coding retained_intron MGP_NODShiLtJ_T0083114.1 MGP_NODShiLtJ_G0031951.1 mouse_genomes_project 7 46143519 46144431 - Cd33 protein_coding processed_transcript MGP_NODShiLtJ_T0081175.1 MGP_NODShiLtJ_G0031426.1 mouse_genomes_project 7 4171454 4436854 + MGP_NODShiLtJ_P0081175 Usp29 protein_coding protein_coding MGP_NODShiLtJ_T0081176.1 MGP_NODShiLtJ_G0031426.1 mouse_genomes_project 7 4171612 4427086 + MGP_NODShiLtJ_P0081176 Usp29 protein_coding protein_coding MGP_NODShiLtJ_T0081177.1 MGP_NODShiLtJ_G0031426.1 mouse_genomes_project 7 4414645 4430139 + MGP_NODShiLtJ_P0081177 Usp29 protein_coding protein_coding MGP_NODShiLtJ_T0081178.1 MGP_NODShiLtJ_G0031426.1 mouse_genomes_project 7 4426491 4429101 + MGP_NODShiLtJ_P0081178 Usp29 protein_coding protein_coding MGP_NODShiLtJ_T0084260.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88491688 88515732 + MGP_NODShiLtJ_P0084260 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084261.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88491689 88515732 + MGP_NODShiLtJ_P0084261 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084262.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88491703 88512219 + Prc1 protein_coding retained_intron MGP_NODShiLtJ_T0084263.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88491711 88515057 + MGP_NODShiLtJ_P0084263 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084264.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88491712 88501519 + Prc1 protein_coding retained_intron MGP_NODShiLtJ_T0084265.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88491717 88515724 + MGP_NODShiLtJ_P0084265 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084266.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88491743 88515727 + MGP_NODShiLtJ_P0084266 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084267.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88491751 88501709 + Prc1 protein_coding retained_intron MGP_NODShiLtJ_T0084268.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88501482 88503045 + Prc1 protein_coding retained_intron MGP_NODShiLtJ_T0084269.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88501816 88510354 + MGP_NODShiLtJ_P0084269 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084270.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88507239 88515730 + MGP_NODShiLtJ_P0084270 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084271.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88510318 88512967 + MGP_NODShiLtJ_P0084271 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084272.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88510574 88514990 + MGP_NODShiLtJ_P0084272 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0084273.1 MGP_NODShiLtJ_G0032227.1 mouse_genomes_project 7 88511780 88513170 + MGP_NODShiLtJ_P0084273 Prc1 protein_coding protein_coding MGP_NODShiLtJ_T0015610.1 MGP_NODShiLtJ_G0013718.1 mouse_genomes_project 7 25308957 25309897 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081033.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1868174 1875549 + MGP_NODShiLtJ_P0081033 Suv420h2 protein_coding protein_coding MGP_NODShiLtJ_T0081034.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1868212 1870148 + Suv420h2 protein_coding retained_intron MGP_NODShiLtJ_T0081035.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1868215 1871113 + MGP_NODShiLtJ_P0081035 Suv420h2 protein_coding protein_coding MGP_NODShiLtJ_T0081036.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1868226 1875549 + MGP_NODShiLtJ_P0081036 Suv420h2 protein_coding protein_coding MGP_NODShiLtJ_T0081037.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1868244 1875549 + MGP_NODShiLtJ_P0081037 Suv420h2 protein_coding protein_coding MGP_NODShiLtJ_T0081038.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1869694 1870597 + Suv420h2 protein_coding retained_intron MGP_NODShiLtJ_T0081039.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1869909 1874933 + MGP_NODShiLtJ_P0081039 Suv420h2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081040.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1870383 1873943 + Suv420h2 protein_coding retained_intron MGP_NODShiLtJ_T0081041.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1870513 1871542 + Suv420h2 protein_coding retained_intron MGP_NODShiLtJ_T0081042.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1870716 1871666 + Suv420h2 protein_coding retained_intron MGP_NODShiLtJ_T0081043.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1870803 1874156 + Suv420h2 protein_coding retained_intron MGP_NODShiLtJ_T0081044.1 MGP_NODShiLtJ_G0031368.1 mouse_genomes_project 7 1873842 1874631 + MGP_NODShiLtJ_P0081044 Suv420h2 protein_coding protein_coding MGP_NODShiLtJ_T0081725.1 MGP_NODShiLtJ_G0031613.1 mouse_genomes_project 7 19489502 19544590 + MGP_NODShiLtJ_P0081725 Nlrp9b protein_coding protein_coding MGP_NODShiLtJ_T0081726.1 MGP_NODShiLtJ_G0031613.1 mouse_genomes_project 7 19489502 19508383 + MGP_NODShiLtJ_P0081726 Nlrp9b protein_coding protein_coding MGP_NODShiLtJ_T0081727.1 MGP_NODShiLtJ_G0031613.1 mouse_genomes_project 7 19501828 19544536 + MGP_NODShiLtJ_P0081727 Nlrp9b protein_coding protein_coding MGP_NODShiLtJ_T0081918.1 MGP_NODShiLtJ_G0031672.1 mouse_genomes_project 7 25099261 25113442 - MGP_NODShiLtJ_P0081918 Erf protein_coding protein_coding MGP_NODShiLtJ_T0081919.1 MGP_NODShiLtJ_G0031672.1 mouse_genomes_project 7 25106632 25113411 - MGP_NODShiLtJ_P0081919 Erf protein_coding protein_coding MGP_NODShiLtJ_T0081466.1 MGP_NODShiLtJ_G0031530.1 mouse_genomes_project 7 15847675 15858323 - MGP_NODShiLtJ_P0081466 Calm3 protein_coding protein_coding MGP_NODShiLtJ_T0081467.1 MGP_NODShiLtJ_G0031530.1 mouse_genomes_project 7 15847697 15849498 - MGP_NODShiLtJ_P0081467 Calm3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081468.1 MGP_NODShiLtJ_G0031530.1 mouse_genomes_project 7 15848233 15849536 - MGP_NODShiLtJ_P0081468 Calm3 protein_coding protein_coding MGP_NODShiLtJ_T0081469.1 MGP_NODShiLtJ_G0031530.1 mouse_genomes_project 7 15849476 15858038 - Calm3 protein_coding processed_transcript MGP_NODShiLtJ_T0005128.1 MGP_NODShiLtJ_G0004362.1 mouse_genomes_project 7 31170465 31180224 + Arhgap33os antisense antisense MGP_NODShiLtJ_T0015725.1 MGP_NODShiLtJ_G0013833.1 mouse_genomes_project 7 82890550 82890754 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081528.1 MGP_NODShiLtJ_G0031557.1 mouse_genomes_project 7 18247202 18285808 + MGP_NODShiLtJ_P0081528 Nova2 protein_coding protein_coding MGP_NODShiLtJ_T0018181.1 MGP_NODShiLtJ_G0015525.1 mouse_genomes_project 7 27994709 27997895 - Gm44684 processed_transcript processed_transcript MGP_NODShiLtJ_T0010836.1 MGP_NODShiLtJ_G0008969.1 mouse_genomes_project 7 160589455 160589540 + Mir3105 miRNA miRNA MGP_NODShiLtJ_T0082949.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36854279 36921599 + MGP_NODShiLtJ_P0082949 Ankrd27 protein_coding protein_coding MGP_NODShiLtJ_T0082950.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36854285 36890190 + MGP_NODShiLtJ_P0082950 Ankrd27 protein_coding protein_coding MGP_NODShiLtJ_T0082951.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36854285 36881557 + MGP_NODShiLtJ_P0082951 Ankrd27 protein_coding protein_coding MGP_NODShiLtJ_T0082952.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36854290 36916908 + MGP_NODShiLtJ_P0082952 Ankrd27 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082953.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36854310 36884955 + MGP_NODShiLtJ_P0082953 Ankrd27 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082954.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36854312 36921599 + MGP_NODShiLtJ_P0082954 Ankrd27 protein_coding protein_coding MGP_NODShiLtJ_T0082956.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36881339 36885425 + Ankrd27 protein_coding retained_intron MGP_NODShiLtJ_T0082957.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36894213 36897123 + Ankrd27 protein_coding retained_intron MGP_NODShiLtJ_T0082958.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36898025 36910582 + MGP_NODShiLtJ_P0082958 Ankrd27 protein_coding protein_coding MGP_NODShiLtJ_T0082959.1 MGP_NODShiLtJ_G0031909.1 mouse_genomes_project 7 36901632 36909677 + MGP_NODShiLtJ_P0082959 Ankrd27 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082082.1 MGP_NODShiLtJ_G0031717.1 mouse_genomes_project 7 27462273 27485736 - MGP_NODShiLtJ_P0082082 Itpkc protein_coding protein_coding MGP_NODShiLtJ_T0082083.1 MGP_NODShiLtJ_G0031717.1 mouse_genomes_project 7 27463071 27468154 - Itpkc protein_coding processed_transcript MGP_NODShiLtJ_T0082084.1 MGP_NODShiLtJ_G0031717.1 mouse_genomes_project 7 27467666 27469556 - Itpkc protein_coding retained_intron MGP_NODShiLtJ_T0082085.1 MGP_NODShiLtJ_G0031717.1 mouse_genomes_project 7 27482851 27485769 - Itpkc protein_coding retained_intron MGP_NODShiLtJ_T0084437.1 MGP_NODShiLtJ_G0032257.1 mouse_genomes_project 7 90523907 90645116 + MGP_NODShiLtJ_P0084437 Sh3gl3 protein_coding protein_coding MGP_NODShiLtJ_T0084438.1 MGP_NODShiLtJ_G0032257.1 mouse_genomes_project 7 90524554 90630906 + Sh3gl3 protein_coding retained_intron MGP_NODShiLtJ_T0084439.1 MGP_NODShiLtJ_G0032257.1 mouse_genomes_project 7 90524568 90668738 + MGP_NODShiLtJ_P0084439 Sh3gl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084440.1 MGP_NODShiLtJ_G0032257.1 mouse_genomes_project 7 90524662 90668738 + MGP_NODShiLtJ_P0084440 Sh3gl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084441.1 MGP_NODShiLtJ_G0032257.1 mouse_genomes_project 7 90524687 90668737 + MGP_NODShiLtJ_P0084441 Sh3gl3 protein_coding protein_coding MGP_NODShiLtJ_T0084442.1 MGP_NODShiLtJ_G0032257.1 mouse_genomes_project 7 90524868 90645179 + MGP_NODShiLtJ_P0084442 Sh3gl3 protein_coding protein_coding MGP_NODShiLtJ_T0084443.1 MGP_NODShiLtJ_G0032257.1 mouse_genomes_project 7 90524946 90526016 + Sh3gl3 protein_coding processed_transcript MGP_NODShiLtJ_T0084444.1 MGP_NODShiLtJ_G0032257.1 mouse_genomes_project 7 90631753 90668548 + MGP_NODShiLtJ_P0084444 Sh3gl3 protein_coding protein_coding MGP_NODShiLtJ_T0008891.1 MGP_NODShiLtJ_G0007162.1 mouse_genomes_project 7 110140801 110170773 - Gm44507 lincRNA lincRNA MGP_NODShiLtJ_T0084297.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88548529 88562901 - Man2a2 protein_coding retained_intron MGP_NODShiLtJ_T0084298.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88548529 88570796 - MGP_NODShiLtJ_P0084298 Man2a2 protein_coding protein_coding MGP_NODShiLtJ_T0084299.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88550655 88559150 - MGP_NODShiLtJ_P0084299 Man2a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084300.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88554314 88563111 - Man2a2 protein_coding retained_intron MGP_NODShiLtJ_T0084301.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88558538 88559316 - Man2a2 protein_coding retained_intron MGP_NODShiLtJ_T0084302.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88559121 88562939 - MGP_NODShiLtJ_P0084302 Man2a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084303.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88559754 88570282 - MGP_NODShiLtJ_P0084303 Man2a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084304.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88559919 88570547 - Man2a2 protein_coding retained_intron MGP_NODShiLtJ_T0084305.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88562104 88563099 - Man2a2 protein_coding retained_intron MGP_NODShiLtJ_T0084306.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88569056 88570279 - MGP_NODShiLtJ_P0084306 Man2a2 protein_coding protein_coding MGP_NODShiLtJ_T0084307.1 MGP_NODShiLtJ_G0032230.1 mouse_genomes_project 7 88569084 88570503 - MGP_NODShiLtJ_P0084307 Man2a2 protein_coding protein_coding MGP_NODShiLtJ_T0082238.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28773859 28786438 - MGP_NODShiLtJ_P0082238 Plekhg2 protein_coding protein_coding MGP_NODShiLtJ_T0082239.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28773860 28786782 - Plekhg2 protein_coding retained_intron MGP_NODShiLtJ_T0082240.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28773860 28777546 - Plekhg2 protein_coding retained_intron MGP_NODShiLtJ_T0082241.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28773860 28785779 - MGP_NODShiLtJ_P0082241 Plekhg2 protein_coding protein_coding MGP_NODShiLtJ_T0082242.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28773860 28786699 - MGP_NODShiLtJ_P0082242 Plekhg2 protein_coding protein_coding MGP_NODShiLtJ_T0082243.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28775347 28786804 - MGP_NODShiLtJ_P0082243 Plekhg2 protein_coding protein_coding MGP_NODShiLtJ_T0082244.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28778208 28779697 - Plekhg2 protein_coding retained_intron MGP_NODShiLtJ_T0082245.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28782614 28785932 - MGP_NODShiLtJ_P0082245 Plekhg2 protein_coding protein_coding MGP_NODShiLtJ_T0082246.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28784285 28786285 - MGP_NODShiLtJ_P0082246 Plekhg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082247.1 MGP_NODShiLtJ_G0031756.1 mouse_genomes_project 7 28784620 28785713 - MGP_NODShiLtJ_P0082247 Plekhg2 protein_coding protein_coding MGP_NODShiLtJ_T0102097.1 MGP_NODShiLtJ_G0040264.1 mouse_genomes_project 7 14435826 14436123 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015737.1 MGP_NODShiLtJ_G0013845.1 mouse_genomes_project 7 89746436 89747213 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010796.1 MGP_NODShiLtJ_G0008929.1 mouse_genomes_project 7 86942004 86942101 + Mir7-2 miRNA miRNA MGP_NODShiLtJ_T0002180.1 MGP_NODShiLtJ_G0002092.1 mouse_genomes_project 7 47079917 47083005 + TEC TEC MGP_NODShiLtJ_T0005578.1 MGP_NODShiLtJ_G0004692.1 mouse_genomes_project 7 88048981 88050780 + 5430400D12Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0085921.1 MGP_NODShiLtJ_G0032760.1 mouse_genomes_project 7 136957850 136976981 + MGP_NODShiLtJ_P0085921 Dctn5 protein_coding protein_coding MGP_NODShiLtJ_T0085922.1 MGP_NODShiLtJ_G0032760.1 mouse_genomes_project 7 136957863 136976981 + Dctn5 protein_coding retained_intron MGP_NODShiLtJ_T0085923.1 MGP_NODShiLtJ_G0032760.1 mouse_genomes_project 7 136957881 136959946 + MGP_NODShiLtJ_P0085923 Dctn5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085924.1 MGP_NODShiLtJ_G0032760.1 mouse_genomes_project 7 136969986 136976518 + MGP_NODShiLtJ_P0085924 Dctn5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086133.1 MGP_NODShiLtJ_G0032797.1 mouse_genomes_project 7 141758711 141761139 - MGP_NODShiLtJ_P0086133 Nupr1 protein_coding protein_coding MGP_NODShiLtJ_T0086134.1 MGP_NODShiLtJ_G0032797.1 mouse_genomes_project 7 141758714 141762473 - Nupr1 protein_coding retained_intron MGP_NODShiLtJ_T0086135.1 MGP_NODShiLtJ_G0032797.1 mouse_genomes_project 7 141758740 141760807 - MGP_NODShiLtJ_P0086135 Nupr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086136.1 MGP_NODShiLtJ_G0032797.1 mouse_genomes_project 7 141758904 141760938 - MGP_NODShiLtJ_P0086136 Nupr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086137.1 MGP_NODShiLtJ_G0032797.1 mouse_genomes_project 7 141760410 141766099 - Nupr1 protein_coding processed_transcript MGP_NODShiLtJ_T0086138.1 MGP_NODShiLtJ_G0032797.1 mouse_genomes_project 7 141760410 141761479 - Nupr1 protein_coding processed_transcript MGP_NODShiLtJ_T0085096.1 MGP_NODShiLtJ_G0032439.1 mouse_genomes_project 7 115063439 115064390 + MGP_NODShiLtJ_P0085096 Olfr568 protein_coding protein_coding MGP_NODShiLtJ_T0102149.1 MGP_NODShiLtJ_G0040315.1 mouse_genomes_project 7 51599317 51600145 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0018213.1 MGP_NODShiLtJ_G0015537.1 mouse_genomes_project 7 60926289 60927224 + Gm15888 processed_transcript processed_transcript MGP_NODShiLtJ_T0002234.1 MGP_NODShiLtJ_G0002145.1 mouse_genomes_project 7 88204079 88207117 + TEC TEC MGP_NODShiLtJ_T0015753.1 MGP_NODShiLtJ_G0013861.1 mouse_genomes_project 7 108034373 108034845 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015637.1 MGP_NODShiLtJ_G0013745.1 mouse_genomes_project 7 34435573 34436026 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087361.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965328 158982489 + Tnnt3 protein_coding processed_transcript MGP_NODShiLtJ_T0087362.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965328 158982489 + MGP_NODShiLtJ_P0087362 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087363.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965328 158982489 + MGP_NODShiLtJ_P0087363 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087364.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965328 158982489 + MGP_NODShiLtJ_P0087364 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087365.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965328 158982489 + MGP_NODShiLtJ_P0087365 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087366.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965328 158982489 + MGP_NODShiLtJ_P0087366 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087367.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965328 158982489 + MGP_NODShiLtJ_P0087367 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087368.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965328 158982489 + MGP_NODShiLtJ_P0087368 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087369.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965335 158982484 + MGP_NODShiLtJ_P0087369 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087370.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965335 158982484 + MGP_NODShiLtJ_P0087370 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087371.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965335 158982484 + MGP_NODShiLtJ_P0087371 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087372.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965335 158982484 + MGP_NODShiLtJ_P0087372 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087373.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965356 158982488 + MGP_NODShiLtJ_P0087373 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087374.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158965364 158982485 + MGP_NODShiLtJ_P0087374 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087375.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968109 158978017 + MGP_NODShiLtJ_P0087375 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087376.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968112 158979103 + MGP_NODShiLtJ_P0087376 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087377.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968130 158982311 + MGP_NODShiLtJ_P0087377 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087378.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968130 158982311 + MGP_NODShiLtJ_P0087378 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087379.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968130 158982311 + MGP_NODShiLtJ_P0087379 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087380.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968130 158982311 + MGP_NODShiLtJ_P0087380 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087381.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968130 158982311 + MGP_NODShiLtJ_P0087381 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087382.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968130 158982311 + MGP_NODShiLtJ_P0087382 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087383.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968130 158982311 + MGP_NODShiLtJ_P0087383 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087384.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158968130 158982311 + MGP_NODShiLtJ_P0087384 Tnnt3 protein_coding protein_coding MGP_NODShiLtJ_T0087385.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158970507 158979066 + Tnnt3 protein_coding retained_intron MGP_NODShiLtJ_T0087386.1 MGP_NODShiLtJ_G0033066.1 mouse_genomes_project 7 158980610 158982490 + Tnnt3 protein_coding retained_intron MGP_NODShiLtJ_T0083480.1 MGP_NODShiLtJ_G0032045.1 mouse_genomes_project 7 48353882 48354736 - Ppp1r15a protein_coding processed_transcript MGP_NODShiLtJ_T0083481.1 MGP_NODShiLtJ_G0032045.1 mouse_genomes_project 7 48353883 48357007 - MGP_NODShiLtJ_P0083481 Ppp1r15a protein_coding protein_coding MGP_NODShiLtJ_T0083482.1 MGP_NODShiLtJ_G0032045.1 mouse_genomes_project 7 48353888 48356885 - Ppp1r15a protein_coding retained_intron MGP_NODShiLtJ_T0005143.1 MGP_NODShiLtJ_G0004374.1 mouse_genomes_project 7 36264466 36264895 + Gm45095 antisense antisense MGP_NODShiLtJ_T0010759.1 MGP_NODShiLtJ_G0008892.1 mouse_genomes_project 7 47248905 47248978 - Mir7053 miRNA miRNA MGP_NODShiLtJ_T0008830.1 MGP_NODShiLtJ_G0007124.1 mouse_genomes_project 7 80430891 80434085 + Gm44725 lincRNA lincRNA MGP_NODShiLtJ_T0083382.1 MGP_NODShiLtJ_G0032024.1 mouse_genomes_project 7 47965354 47966198 + MGP_NODShiLtJ_P0083382 Pth2 protein_coding protein_coding MGP_NODShiLtJ_T0005236.1 MGP_NODShiLtJ_G0004437.1 mouse_genomes_project 7 142804566 142822652 - Gm28198 antisense antisense MGP_NODShiLtJ_T0015568.1 MGP_NODShiLtJ_G0013676.1 mouse_genomes_project 7 3264116 3265065 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081216.1 MGP_NODShiLtJ_G0031454.1 mouse_genomes_project 7 10787110 10809010 - MGP_NODShiLtJ_P0081216 protein_coding protein_coding MGP_NODShiLtJ_T0083347.1 MGP_NODShiLtJ_G0032007.1 mouse_genomes_project 7 47746204 47755836 - MGP_NODShiLtJ_P0083347 protein_coding protein_coding MGP_NODShiLtJ_T0082659.1 MGP_NODShiLtJ_G0031852.1 mouse_genomes_project 7 31344527 31345406 - MGP_NODShiLtJ_P0082659 Pmis2 protein_coding protein_coding MGP_NODShiLtJ_T0082660.1 MGP_NODShiLtJ_G0031852.1 mouse_genomes_project 7 31344562 31345401 - Pmis2 protein_coding processed_transcript MGP_NODShiLtJ_T0008779.1 MGP_NODShiLtJ_G0007085.1 mouse_genomes_project 7 41965784 41974553 + 4933404I11Rik lincRNA lincRNA MGP_NODShiLtJ_T0085113.1 MGP_NODShiLtJ_G0032455.1 mouse_genomes_project 7 115391179 115393219 - MGP_NODShiLtJ_P0085113 Olfr591 protein_coding protein_coding MGP_NODShiLtJ_T0085237.1 MGP_NODShiLtJ_G0032553.1 mouse_genomes_project 7 118288530 118289592 - MGP_NODShiLtJ_P0085237 Olfr690 protein_coding protein_coding MGP_NODShiLtJ_T0086799.1 MGP_NODShiLtJ_G0032924.1 mouse_genomes_project 7 148557102 148579798 + MGP_NODShiLtJ_P0086799 Fam175b protein_coding protein_coding MGP_NODShiLtJ_T0086800.1 MGP_NODShiLtJ_G0032924.1 mouse_genomes_project 7 148557118 148583600 + MGP_NODShiLtJ_P0086800 Fam175b protein_coding protein_coding MGP_NODShiLtJ_T0086801.1 MGP_NODShiLtJ_G0032924.1 mouse_genomes_project 7 148557130 148579535 + MGP_NODShiLtJ_P0086801 Fam175b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086802.1 MGP_NODShiLtJ_G0032924.1 mouse_genomes_project 7 148557142 148574384 + Fam175b protein_coding retained_intron MGP_NODShiLtJ_T0086803.1 MGP_NODShiLtJ_G0032924.1 mouse_genomes_project 7 148557142 148583597 + MGP_NODShiLtJ_P0086803 Fam175b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086804.1 MGP_NODShiLtJ_G0032924.1 mouse_genomes_project 7 148557200 148577268 + Fam175b protein_coding processed_transcript MGP_NODShiLtJ_T0086805.1 MGP_NODShiLtJ_G0032924.1 mouse_genomes_project 7 148578028 148583599 + Fam175b protein_coding retained_intron MGP_NODShiLtJ_T0086308.1 MGP_NODShiLtJ_G0032824.1 mouse_genomes_project 7 142189841 142193522 - MGP_NODShiLtJ_P0086308 Prrt2 protein_coding protein_coding MGP_NODShiLtJ_T0086309.1 MGP_NODShiLtJ_G0032824.1 mouse_genomes_project 7 142189853 142193285 - Prrt2 protein_coding retained_intron MGP_NODShiLtJ_T0086310.1 MGP_NODShiLtJ_G0032824.1 mouse_genomes_project 7 142189958 142192213 - MGP_NODShiLtJ_P0086310 Prrt2 protein_coding protein_coding MGP_NODShiLtJ_T0086311.1 MGP_NODShiLtJ_G0032824.1 mouse_genomes_project 7 142190468 142191906 - MGP_NODShiLtJ_P0086311 Prrt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086312.1 MGP_NODShiLtJ_G0032824.1 mouse_genomes_project 7 142190817 142193267 - Prrt2 protein_coding processed_transcript MGP_NODShiLtJ_T0086313.1 MGP_NODShiLtJ_G0032824.1 mouse_genomes_project 7 142191014 142193448 - MGP_NODShiLtJ_P0086313 Prrt2 protein_coding protein_coding MGP_NODShiLtJ_T0086314.1 MGP_NODShiLtJ_G0032824.1 mouse_genomes_project 7 142191705 142192666 - Prrt2 protein_coding processed_transcript MGP_NODShiLtJ_T0085144.1 MGP_NODShiLtJ_G0032484.1 mouse_genomes_project 7 116172822 116173888 - MGP_NODShiLtJ_P0085144 Olfr630 protein_coding protein_coding MGP_NODShiLtJ_T0085861.1 MGP_NODShiLtJ_G0032743.1 mouse_genomes_project 7 135671269 135701262 + MGP_NODShiLtJ_P0085861 Polr3e protein_coding protein_coding MGP_NODShiLtJ_T0085862.1 MGP_NODShiLtJ_G0032743.1 mouse_genomes_project 7 135671269 135701262 + MGP_NODShiLtJ_P0085862 Polr3e protein_coding protein_coding MGP_NODShiLtJ_T0083583.1 MGP_NODShiLtJ_G0032072.1 mouse_genomes_project 7 48802827 48805654 - MGP_NODShiLtJ_P0083583 Emp3 protein_coding protein_coding MGP_NODShiLtJ_T0083584.1 MGP_NODShiLtJ_G0032072.1 mouse_genomes_project 7 48802827 48806231 - MGP_NODShiLtJ_P0083584 Emp3 protein_coding protein_coding MGP_NODShiLtJ_T0081062.1 MGP_NODShiLtJ_G0031374.1 mouse_genomes_project 7 1928507 1930745 + MGP_NODShiLtJ_P0081062 Rpl28 protein_coding protein_coding MGP_NODShiLtJ_T0081063.1 MGP_NODShiLtJ_G0031374.1 mouse_genomes_project 7 1928623 1930232 + MGP_NODShiLtJ_P0081063 Rpl28 protein_coding protein_coding MGP_NODShiLtJ_T0081064.1 MGP_NODShiLtJ_G0031374.1 mouse_genomes_project 7 1929059 1929487 + Rpl28 protein_coding retained_intron MGP_NODShiLtJ_T0081065.1 MGP_NODShiLtJ_G0031374.1 mouse_genomes_project 7 1929255 1930241 + MGP_NODShiLtJ_P0081065 Rpl28 protein_coding protein_coding MGP_NODShiLtJ_T0081066.1 MGP_NODShiLtJ_G0031374.1 mouse_genomes_project 7 1929512 1930241 + Rpl28 protein_coding retained_intron MGP_NODShiLtJ_T0082249.1 MGP_NODShiLtJ_G0031758.1 mouse_genomes_project 7 28800243 28811480 - MGP_NODShiLtJ_P0082249 Med29 protein_coding protein_coding MGP_NODShiLtJ_T0102191.1 MGP_NODShiLtJ_G0040357.1 mouse_genomes_project 7 114658135 114659071 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082059.1 MGP_NODShiLtJ_G0031710.1 mouse_genomes_project 7 27404284 27409056 + MGP_NODShiLtJ_P0082059 Cyp2t4 protein_coding protein_coding MGP_NODShiLtJ_T0082060.1 MGP_NODShiLtJ_G0031710.1 mouse_genomes_project 7 27405685 27409160 + MGP_NODShiLtJ_P0082060 Cyp2t4 protein_coding protein_coding MGP_NODShiLtJ_T0085103.1 MGP_NODShiLtJ_G0032446.1 mouse_genomes_project 7 115161594 115162533 + MGP_NODShiLtJ_P0085103 Olfr576 protein_coding protein_coding MGP_NODShiLtJ_T0085104.1 MGP_NODShiLtJ_G0032446.1 mouse_genomes_project 7 115161594 115174104 + MGP_NODShiLtJ_P0085104 Olfr576 protein_coding protein_coding MGP_NODShiLtJ_T0102172.1 MGP_NODShiLtJ_G0040338.1 mouse_genomes_project 7 94416110 94417017 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100753.1 MGP_NODShiLtJ_G0039147.1 mouse_genomes_project 7 65256082 65256152 - Snord107 snoRNA snoRNA MGP_NODShiLtJ_T0005130.1 MGP_NODShiLtJ_G0004364.1 mouse_genomes_project 7 31395454 31426289 + antisense antisense MGP_NODShiLtJ_T0005131.1 MGP_NODShiLtJ_G0004364.1 mouse_genomes_project 7 31399036 31408587 + antisense antisense MGP_NODShiLtJ_T0005184.1 MGP_NODShiLtJ_G0004402.1 mouse_genomes_project 7 88607619 88609928 + Gm44851 antisense antisense MGP_NODShiLtJ_T0085408.1 MGP_NODShiLtJ_G0032628.1 mouse_genomes_project 7 121969640 121970633 + MGP_NODShiLtJ_P0085408 Olfr498 protein_coding protein_coding MGP_NODShiLtJ_T0086838.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149451239 149476934 - Uros protein_coding retained_intron MGP_NODShiLtJ_T0086839.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149451352 149476798 - MGP_NODShiLtJ_P0086839 Uros protein_coding protein_coding MGP_NODShiLtJ_T0086840.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149451352 149476909 - MGP_NODShiLtJ_P0086840 Uros protein_coding protein_coding MGP_NODShiLtJ_T0086841.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149451361 149477121 - MGP_NODShiLtJ_P0086841 Uros protein_coding protein_coding MGP_NODShiLtJ_T0086842.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149451957 149463396 - Uros protein_coding processed_transcript MGP_NODShiLtJ_T0086843.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149457130 149476899 - MGP_NODShiLtJ_P0086843 Uros protein_coding protein_coding MGP_NODShiLtJ_T0086844.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149469695 149470473 - MGP_NODShiLtJ_P0086844 Uros protein_coding protein_coding MGP_NODShiLtJ_T0086845.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149469749 149476897 - MGP_NODShiLtJ_P0086845 Uros protein_coding protein_coding MGP_NODShiLtJ_T0086846.1 MGP_NODShiLtJ_G0032930.1 mouse_genomes_project 7 149469751 149477912 - MGP_NODShiLtJ_P0086846 Uros protein_coding protein_coding MGP_NODShiLtJ_T0083345.1 MGP_NODShiLtJ_G0032005.1 mouse_genomes_project 7 47725954 47744156 - MGP_NODShiLtJ_P0083345 Cpt1c protein_coding protein_coding MGP_NODShiLtJ_T0083823.1 MGP_NODShiLtJ_G0032137.1 mouse_genomes_project 7 62561746 62997335 + MGP_NODShiLtJ_P0083823 Gabrb3 protein_coding protein_coding MGP_NODShiLtJ_T0083824.1 MGP_NODShiLtJ_G0032137.1 mouse_genomes_project 7 62744931 62996173 + MGP_NODShiLtJ_P0083824 Gabrb3 protein_coding protein_coding MGP_NODShiLtJ_T0083825.1 MGP_NODShiLtJ_G0032137.1 mouse_genomes_project 7 62745575 62997339 + MGP_NODShiLtJ_P0083825 Gabrb3 protein_coding protein_coding MGP_NODShiLtJ_T0083826.1 MGP_NODShiLtJ_G0032137.1 mouse_genomes_project 7 62745586 62928652 + Gabrb3 protein_coding retained_intron MGP_NODShiLtJ_T0083827.1 MGP_NODShiLtJ_G0032137.1 mouse_genomes_project 7 62745943 62983752 + MGP_NODShiLtJ_P0083827 Gabrb3 protein_coding protein_coding MGP_NODShiLtJ_T0083828.1 MGP_NODShiLtJ_G0032137.1 mouse_genomes_project 7 62958957 62983697 + Gabrb3 protein_coding retained_intron MGP_NODShiLtJ_T0087261.1 MGP_NODShiLtJ_G0033041.1 mouse_genomes_project 7 157805565 157809725 + MGP_NODShiLtJ_P0087261 Cd151 protein_coding protein_coding MGP_NODShiLtJ_T0087262.1 MGP_NODShiLtJ_G0033041.1 mouse_genomes_project 7 157805565 157809725 + MGP_NODShiLtJ_P0087262 Cd151 protein_coding protein_coding MGP_NODShiLtJ_T0087263.1 MGP_NODShiLtJ_G0033041.1 mouse_genomes_project 7 157806992 157809725 + MGP_NODShiLtJ_P0087263 Cd151 protein_coding protein_coding MGP_NODShiLtJ_T0085161.1 MGP_NODShiLtJ_G0032500.1 mouse_genomes_project 7 116538951 116539896 - MGP_NODShiLtJ_P0085161 Olfr640 protein_coding protein_coding MGP_NODShiLtJ_T0015639.1 MGP_NODShiLtJ_G0013747.1 mouse_genomes_project 7 34436592 34436695 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011577.1 MGP_NODShiLtJ_G0009710.1 mouse_genomes_project 7 82455159 82455510 - Gm22326 misc_RNA misc_RNA MGP_NODShiLtJ_T0081281.1 MGP_NODShiLtJ_G0031472.1 mouse_genomes_project 7 11329520 11330447 - MGP_NODShiLtJ_P0081281 Vmn1r85 protein_coding protein_coding MGP_NODShiLtJ_T0082671.1 MGP_NODShiLtJ_G0031857.1 mouse_genomes_project 7 31401069 31436161 + Sbsn protein_coding processed_transcript MGP_NODShiLtJ_T0082672.1 MGP_NODShiLtJ_G0031857.1 mouse_genomes_project 7 31431825 31436168 + MGP_NODShiLtJ_P0082672 Sbsn protein_coding protein_coding MGP_NODShiLtJ_T0082673.1 MGP_NODShiLtJ_G0031857.1 mouse_genomes_project 7 31431825 31436169 + MGP_NODShiLtJ_P0082673 Sbsn protein_coding protein_coding MGP_NODShiLtJ_T0082674.1 MGP_NODShiLtJ_G0031857.1 mouse_genomes_project 7 31431829 31436169 + MGP_NODShiLtJ_P0082674 Sbsn protein_coding protein_coding MGP_NODShiLtJ_T0082675.1 MGP_NODShiLtJ_G0031857.1 mouse_genomes_project 7 31431913 31436169 + MGP_NODShiLtJ_P0082675 Sbsn protein_coding protein_coding MGP_NODShiLtJ_T0082676.1 MGP_NODShiLtJ_G0031857.1 mouse_genomes_project 7 31432716 31436161 + MGP_NODShiLtJ_P0082676 Sbsn protein_coding protein_coding MGP_NODShiLtJ_T0005138.1 MGP_NODShiLtJ_G0004370.1 mouse_genomes_project 7 31916025 31924515 + Gm10640 antisense antisense MGP_NODShiLtJ_T0005139.1 MGP_NODShiLtJ_G0004370.1 mouse_genomes_project 7 31923318 31933958 + Gm10640 antisense antisense MGP_NODShiLtJ_T0083937.1 MGP_NODShiLtJ_G0032163.1 mouse_genomes_project 7 72597004 72615808 + MGP_NODShiLtJ_P0083937 Gm45213 protein_coding protein_coding MGP_NODShiLtJ_T0083992.1 MGP_NODShiLtJ_G0032175.1 mouse_genomes_project 7 73860265 74032517 - MGP_NODShiLtJ_P0083992 Mef2a protein_coding protein_coding MGP_NODShiLtJ_T0083993.1 MGP_NODShiLtJ_G0032175.1 mouse_genomes_project 7 73861020 74032517 - MGP_NODShiLtJ_P0083993 Mef2a protein_coding protein_coding MGP_NODShiLtJ_T0083994.1 MGP_NODShiLtJ_G0032175.1 mouse_genomes_project 7 73861186 73966929 - MGP_NODShiLtJ_P0083994 Mef2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083995.1 MGP_NODShiLtJ_G0032175.1 mouse_genomes_project 7 73864071 74032517 - MGP_NODShiLtJ_P0083995 Mef2a protein_coding protein_coding MGP_NODShiLtJ_T0083996.1 MGP_NODShiLtJ_G0032175.1 mouse_genomes_project 7 73864144 74032517 - MGP_NODShiLtJ_P0083996 Mef2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083997.1 MGP_NODShiLtJ_G0032175.1 mouse_genomes_project 7 73864204 74032517 - MGP_NODShiLtJ_P0083997 Mef2a protein_coding protein_coding MGP_NODShiLtJ_T0083998.1 MGP_NODShiLtJ_G0032175.1 mouse_genomes_project 7 73881790 74032517 - MGP_NODShiLtJ_P0083998 Mef2a protein_coding protein_coding MGP_NODShiLtJ_T0083999.1 MGP_NODShiLtJ_G0032175.1 mouse_genomes_project 7 74004331 74032486 - Mef2a protein_coding processed_transcript MGP_NODShiLtJ_T0086338.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142381481 142385807 - MGP_NODShiLtJ_P0086338 Cd2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0086339.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142381817 142385745 - MGP_NODShiLtJ_P0086339 Cd2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0086340.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142381844 142385756 - Cd2bp2 protein_coding retained_intron MGP_NODShiLtJ_T0086341.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142381846 142385794 - MGP_NODShiLtJ_P0086341 Cd2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0086342.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142383465 142385682 - MGP_NODShiLtJ_P0086342 Cd2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0086343.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142384268 142385251 - MGP_NODShiLtJ_P0086343 Cd2bp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086344.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142384333 142385749 - MGP_NODShiLtJ_P0086344 Cd2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0086345.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142384428 142385773 - MGP_NODShiLtJ_P0086345 Cd2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0086346.1 MGP_NODShiLtJ_G0032831.1 mouse_genomes_project 7 142384898 142385857 - MGP_NODShiLtJ_P0086346 Cd2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0008785.1 MGP_NODShiLtJ_G0007090.1 mouse_genomes_project 7 46121558 46126712 - Gm2511 lincRNA lincRNA MGP_NODShiLtJ_T0008786.1 MGP_NODShiLtJ_G0007090.1 mouse_genomes_project 7 46121561 46129364 - Gm2511 lincRNA lincRNA MGP_NODShiLtJ_T0008787.1 MGP_NODShiLtJ_G0007090.1 mouse_genomes_project 7 46125961 46128941 - Gm2511 lincRNA lincRNA MGP_NODShiLtJ_T0015656.1 MGP_NODShiLtJ_G0013764.1 mouse_genomes_project 7 41412739 41413282 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002177.1 MGP_NODShiLtJ_G0002089.1 mouse_genomes_project 7 46316294 46316747 + TEC TEC MGP_NODShiLtJ_T0081722.1 MGP_NODShiLtJ_G0031610.1 mouse_genomes_project 7 19393249 19411049 - MGP_NODShiLtJ_P0081722 Igsf23 protein_coding protein_coding MGP_NODShiLtJ_T0008949.1 MGP_NODShiLtJ_G0007197.1 mouse_genomes_project 7 142484669 142487562 + Gm44728 lincRNA lincRNA MGP_NODShiLtJ_T0008950.1 MGP_NODShiLtJ_G0007197.1 mouse_genomes_project 7 142485155 142487974 + Gm44728 lincRNA lincRNA MGP_NODShiLtJ_T0099531.1 MGP_NODShiLtJ_G0037925.1 mouse_genomes_project 7 157499254 157499350 - Gm22019 snRNA snRNA MGP_NODShiLtJ_T0084624.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 107769313 108531013 + MGP_NODShiLtJ_P0084624 Tenm4 protein_coding protein_coding MGP_NODShiLtJ_T0084625.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 107802284 108035966 + Tenm4 protein_coding retained_intron MGP_NODShiLtJ_T0084626.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 107802334 108100335 + Tenm4 protein_coding processed_transcript MGP_NODShiLtJ_T0084627.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 107804102 108037794 + Tenm4 protein_coding retained_intron MGP_NODShiLtJ_T0084628.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 107804110 108156371 + MGP_NODShiLtJ_P0084628 Tenm4 protein_coding protein_coding MGP_NODShiLtJ_T0084629.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 107804593 108533544 + MGP_NODShiLtJ_P0084629 Tenm4 protein_coding protein_coding MGP_NODShiLtJ_T0084630.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 107805627 108530998 + MGP_NODShiLtJ_P0084630 Tenm4 protein_coding protein_coding MGP_NODShiLtJ_T0084631.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 108125255 108156371 + MGP_NODShiLtJ_P0084631 Tenm4 protein_coding protein_coding MGP_NODShiLtJ_T0084632.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 108253091 108345389 + Tenm4 protein_coding retained_intron MGP_NODShiLtJ_T0084633.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 108391901 108416380 + MGP_NODShiLtJ_P0084633 Tenm4 protein_coding protein_coding MGP_NODShiLtJ_T0084634.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 108415287 108417217 + Tenm4 protein_coding processed_transcript MGP_NODShiLtJ_T0084635.1 MGP_NODShiLtJ_G0032325.1 mouse_genomes_project 7 108415287 108463621 + Tenm4 protein_coding retained_intron MGP_NODShiLtJ_T0015657.1 MGP_NODShiLtJ_G0013765.1 mouse_genomes_project 7 41777637 41778496 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005234.1 MGP_NODShiLtJ_G0004435.1 mouse_genomes_project 7 142204712 142208532 + Gm31749 antisense antisense MGP_NODShiLtJ_T0008882.1 MGP_NODShiLtJ_G0007155.1 mouse_genomes_project 7 100348849 100354427 - 2310010J17Rik lincRNA lincRNA MGP_NODShiLtJ_T0085870.1 MGP_NODShiLtJ_G0032747.1 mouse_genomes_project 7 135794435 135837698 + MGP_NODShiLtJ_P0085870 Mettl9 protein_coding protein_coding MGP_NODShiLtJ_T0015699.1 MGP_NODShiLtJ_G0013807.1 mouse_genomes_project 7 60851712 60852422 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008810.1 MGP_NODShiLtJ_G0007109.1 mouse_genomes_project 7 73833181 73851550 - 1700112J16Rik lincRNA lincRNA MGP_NODShiLtJ_T0082065.1 MGP_NODShiLtJ_G0031712.1 mouse_genomes_project 7 27418912 27429390 - MGP_NODShiLtJ_P0082065 Rab4b protein_coding protein_coding MGP_NODShiLtJ_T0082066.1 MGP_NODShiLtJ_G0031712.1 mouse_genomes_project 7 27418914 27429304 - MGP_NODShiLtJ_P0082066 Rab4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082067.1 MGP_NODShiLtJ_G0031712.1 mouse_genomes_project 7 27418915 27429309 - Rab4b protein_coding retained_intron MGP_NODShiLtJ_T0082069.1 MGP_NODShiLtJ_G0031712.1 mouse_genomes_project 7 27419183 27429382 - Rab4b protein_coding processed_transcript MGP_NODShiLtJ_T0082070.1 MGP_NODShiLtJ_G0031712.1 mouse_genomes_project 7 27422829 27424943 - Rab4b protein_coding retained_intron MGP_NODShiLtJ_T0082071.1 MGP_NODShiLtJ_G0031712.1 mouse_genomes_project 7 27423140 27424890 - Rab4b protein_coding processed_transcript MGP_NODShiLtJ_T0082072.1 MGP_NODShiLtJ_G0031712.1 mouse_genomes_project 7 27426233 27429317 - Rab4b protein_coding processed_transcript MGP_NODShiLtJ_T0086094.1 MGP_NODShiLtJ_G0032791.1 mouse_genomes_project 7 141617010 141620585 + MGP_NODShiLtJ_P0086094 Tufm protein_coding protein_coding MGP_NODShiLtJ_T0086095.1 MGP_NODShiLtJ_G0032791.1 mouse_genomes_project 7 141617027 141620589 + MGP_NODShiLtJ_P0086095 Tufm protein_coding protein_coding MGP_NODShiLtJ_T0086096.1 MGP_NODShiLtJ_G0032791.1 mouse_genomes_project 7 141617278 141618804 + Tufm protein_coding processed_transcript MGP_NODShiLtJ_T0086097.1 MGP_NODShiLtJ_G0032791.1 mouse_genomes_project 7 141618471 141618980 + Tufm protein_coding retained_intron MGP_NODShiLtJ_T0086098.1 MGP_NODShiLtJ_G0032791.1 mouse_genomes_project 7 141619228 141620088 + MGP_NODShiLtJ_P0086098 Tufm protein_coding protein_coding MGP_NODShiLtJ_T0102175.1 MGP_NODShiLtJ_G0040341.1 mouse_genomes_project 7 94816765 94817504 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0018166.1 MGP_NODShiLtJ_G0015518.1 mouse_genomes_project 7 559514 572037 - Gm15927 processed_transcript antisense MGP_NODShiLtJ_T0018167.1 MGP_NODShiLtJ_G0015518.1 mouse_genomes_project 7 569706 570651 - Gm15927 processed_transcript antisense MGP_NODShiLtJ_T0018168.1 MGP_NODShiLtJ_G0015518.1 mouse_genomes_project 7 569707 572005 - Gm15927 processed_transcript retained_intron MGP_NODShiLtJ_T0018169.1 MGP_NODShiLtJ_G0015518.1 mouse_genomes_project 7 571498 571978 - Gm15927 processed_transcript processed_transcript MGP_NODShiLtJ_T0018170.1 MGP_NODShiLtJ_G0015518.1 mouse_genomes_project 7 571714 572288 - Gm15927 processed_transcript processed_transcript MGP_NODShiLtJ_T0081844.1 MGP_NODShiLtJ_G0031657.1 mouse_genomes_project 7 24557639 24572063 + MGP_NODShiLtJ_P0081844 Ceacam10 protein_coding protein_coding MGP_NODShiLtJ_T0081845.1 MGP_NODShiLtJ_G0031657.1 mouse_genomes_project 7 24557643 24572059 + MGP_NODShiLtJ_P0081845 Ceacam10 protein_coding protein_coding MGP_NODShiLtJ_T0081846.1 MGP_NODShiLtJ_G0031657.1 mouse_genomes_project 7 24557692 24572064 + MGP_NODShiLtJ_P0081846 Ceacam10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081847.1 MGP_NODShiLtJ_G0031657.1 mouse_genomes_project 7 24570897 24572063 + Ceacam10 protein_coding retained_intron MGP_NODShiLtJ_T0086295.1 MGP_NODShiLtJ_G0032820.1 mouse_genomes_project 7 142156255 142186932 - MGP_NODShiLtJ_P0086295 Mvp protein_coding protein_coding MGP_NODShiLtJ_T0086296.1 MGP_NODShiLtJ_G0032820.1 mouse_genomes_project 7 142169319 142184176 - MGP_NODShiLtJ_P0086296 Mvp protein_coding protein_coding MGP_NODShiLtJ_T0086298.1 MGP_NODShiLtJ_G0032820.1 mouse_genomes_project 7 142182039 142186861 - Mvp protein_coding retained_intron MGP_NODShiLtJ_T0082357.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657289 29676599 + MGP_NODShiLtJ_P0082357 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082358.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657289 29676599 + MGP_NODShiLtJ_P0082358 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082359.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657289 29676599 + MGP_NODShiLtJ_P0082359 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082360.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657289 29676599 + MGP_NODShiLtJ_P0082360 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082361.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657289 29676599 + MGP_NODShiLtJ_P0082361 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082362.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657289 29676599 + MGP_NODShiLtJ_P0082362 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082363.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657371 29673373 + Rasgrp4 protein_coding retained_intron MGP_NODShiLtJ_T0082364.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657371 29675678 + MGP_NODShiLtJ_P0082364 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082365.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657371 29677996 + MGP_NODShiLtJ_P0082365 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082366.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657371 29678018 + MGP_NODShiLtJ_P0082366 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082367.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657420 29675035 + Rasgrp4 protein_coding retained_intron MGP_NODShiLtJ_T0082368.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657444 29672608 + MGP_NODShiLtJ_P0082368 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0082369.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29657511 29675556 + MGP_NODShiLtJ_P0082369 Rasgrp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082370.1 MGP_NODShiLtJ_G0031786.1 mouse_genomes_project 7 29674252 29675676 + MGP_NODShiLtJ_P0082370 Rasgrp4 protein_coding protein_coding MGP_NODShiLtJ_T0015692.1 MGP_NODShiLtJ_G0013800.1 mouse_genomes_project 7 51867169 51867839 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081257.1 MGP_NODShiLtJ_G0031467.1 mouse_genomes_project 7 11247535 11251793 - MGP_NODShiLtJ_P0081257 Zbtb45 protein_coding protein_coding MGP_NODShiLtJ_T0081258.1 MGP_NODShiLtJ_G0031467.1 mouse_genomes_project 7 11247663 11251771 - MGP_NODShiLtJ_P0081258 Zbtb45 protein_coding protein_coding MGP_NODShiLtJ_T0081677.1 MGP_NODShiLtJ_G0031599.1 mouse_genomes_project 7 19101892 19105047 - MGP_NODShiLtJ_P0081677 Apoc1 protein_coding protein_coding MGP_NODShiLtJ_T0081678.1 MGP_NODShiLtJ_G0031599.1 mouse_genomes_project 7 19101892 19105109 - MGP_NODShiLtJ_P0081678 Apoc1 protein_coding protein_coding MGP_NODShiLtJ_T0101396.1 MGP_NODShiLtJ_G0039604.1 mouse_genomes_project 7 43566050 43566519 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0010780.1 MGP_NODShiLtJ_G0008913.1 mouse_genomes_project 7 67766053 67766123 - Gm23873 miRNA miRNA MGP_NODShiLtJ_T0011585.1 MGP_NODShiLtJ_G0009718.1 mouse_genomes_project 7 142219552 142219798 + Gm25333 misc_RNA misc_RNA MGP_NODShiLtJ_T0102098.1 MGP_NODShiLtJ_G0040265.1 mouse_genomes_project 7 14435842 14436098 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015645.1 MGP_NODShiLtJ_G0013753.1 mouse_genomes_project 7 34837790 34838623 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015578.1 MGP_NODShiLtJ_G0013686.1 mouse_genomes_project 7 11945210 11953270 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099498.1 MGP_NODShiLtJ_G0037892.1 mouse_genomes_project 7 89995946 89996054 + Gm26149 snRNA snRNA MGP_NODShiLtJ_T0081762.1 MGP_NODShiLtJ_G0031633.1 mouse_genomes_project 7 23930579 23941315 - MGP_NODShiLtJ_P0081762 Zfp109 protein_coding protein_coding MGP_NODShiLtJ_T0008907.1 MGP_NODShiLtJ_G0007173.1 mouse_genomes_project 7 128388961 128491083 - 4933406I18Rik lincRNA lincRNA MGP_NODShiLtJ_T0008908.1 MGP_NODShiLtJ_G0007173.1 mouse_genomes_project 7 128429479 128490943 - 4933406I18Rik lincRNA lincRNA MGP_NODShiLtJ_T0015744.1 MGP_NODShiLtJ_G0013852.1 mouse_genomes_project 7 98583616 98584172 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082500.1 MGP_NODShiLtJ_G0031821.1 mouse_genomes_project 7 30871842 30872916 + MGP_NODShiLtJ_P0082500 Polr2i protein_coding protein_coding MGP_NODShiLtJ_T0082501.1 MGP_NODShiLtJ_G0031821.1 mouse_genomes_project 7 30871860 30872906 + MGP_NODShiLtJ_P0082501 Polr2i protein_coding protein_coding MGP_NODShiLtJ_T0082502.1 MGP_NODShiLtJ_G0031821.1 mouse_genomes_project 7 30871860 30872907 + MGP_NODShiLtJ_P0082502 Polr2i protein_coding protein_coding MGP_NODShiLtJ_T0082503.1 MGP_NODShiLtJ_G0031821.1 mouse_genomes_project 7 30871870 30872904 + Polr2i protein_coding retained_intron MGP_NODShiLtJ_T0082504.1 MGP_NODShiLtJ_G0031821.1 mouse_genomes_project 7 30871878 30872846 + Polr2i protein_coding retained_intron MGP_NODShiLtJ_T0082505.1 MGP_NODShiLtJ_G0031821.1 mouse_genomes_project 7 30872131 30872908 + Polr2i protein_coding processed_transcript MGP_NODShiLtJ_T0082506.1 MGP_NODShiLtJ_G0031821.1 mouse_genomes_project 7 30872460 30872903 + Polr2i protein_coding retained_intron MGP_NODShiLtJ_T0087108.1 MGP_NODShiLtJ_G0033017.1 mouse_genomes_project 7 157403384 157414045 - MGP_NODShiLtJ_P0087108 Sigirr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085588.1 MGP_NODShiLtJ_G0032682.1 mouse_genomes_project 7 127291241 127367440 - MGP_NODShiLtJ_P0085588 Btbd10 protein_coding protein_coding MGP_NODShiLtJ_T0085589.1 MGP_NODShiLtJ_G0032682.1 mouse_genomes_project 7 127291252 127330774 - MGP_NODShiLtJ_P0085589 Btbd10 protein_coding protein_coding MGP_NODShiLtJ_T0085590.1 MGP_NODShiLtJ_G0032682.1 mouse_genomes_project 7 127291261 127339601 - MGP_NODShiLtJ_P0085590 Btbd10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085591.1 MGP_NODShiLtJ_G0032682.1 mouse_genomes_project 7 127308257 127312278 - Btbd10 protein_coding retained_intron MGP_NODShiLtJ_T0085592.1 MGP_NODShiLtJ_G0032682.1 mouse_genomes_project 7 127366717 127367437 - Btbd10 protein_coding processed_transcript MGP_NODShiLtJ_T0102065.1 MGP_NODShiLtJ_G0040232.1 mouse_genomes_project 7 9639363 9640286 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008796.1 MGP_NODShiLtJ_G0007098.1 mouse_genomes_project 7 55823990 55845922 - Gm29296 lincRNA lincRNA MGP_NODShiLtJ_T0081500.1 MGP_NODShiLtJ_G0031544.1 mouse_genomes_project 7 17326105 17331468 + MGP_NODShiLtJ_P0081500 Igfl3 protein_coding protein_coding MGP_NODShiLtJ_T0081379.1 MGP_NODShiLtJ_G0031509.1 mouse_genomes_project 7 15040936 15047795 - Dhx34 protein_coding retained_intron MGP_NODShiLtJ_T0081380.1 MGP_NODShiLtJ_G0031509.1 mouse_genomes_project 7 15040936 15065785 - MGP_NODShiLtJ_P0081380 Dhx34 protein_coding protein_coding MGP_NODShiLtJ_T0081381.1 MGP_NODShiLtJ_G0031509.1 mouse_genomes_project 7 15041010 15065780 - MGP_NODShiLtJ_P0081381 Dhx34 protein_coding protein_coding MGP_NODShiLtJ_T0081382.1 MGP_NODShiLtJ_G0031509.1 mouse_genomes_project 7 15041010 15065741 - MGP_NODShiLtJ_P0081382 Dhx34 protein_coding protein_coding MGP_NODShiLtJ_T0081383.1 MGP_NODShiLtJ_G0031509.1 mouse_genomes_project 7 15041010 15065741 - MGP_NODShiLtJ_P0081383 Dhx34 protein_coding protein_coding MGP_NODShiLtJ_T0081384.1 MGP_NODShiLtJ_G0031509.1 mouse_genomes_project 7 15041013 15065741 - MGP_NODShiLtJ_P0081384 Dhx34 protein_coding protein_coding MGP_NODShiLtJ_T0081385.1 MGP_NODShiLtJ_G0031509.1 mouse_genomes_project 7 15049580 15057115 - Dhx34 protein_coding processed_transcript MGP_NODShiLtJ_T0085504.1 MGP_NODShiLtJ_G0032666.1 mouse_genomes_project 7 124388618 124390779 + MGP_NODShiLtJ_P0085504 Adm protein_coding protein_coding MGP_NODShiLtJ_T0085505.1 MGP_NODShiLtJ_G0032666.1 mouse_genomes_project 7 124388626 124390778 + MGP_NODShiLtJ_P0085505 Adm protein_coding protein_coding MGP_NODShiLtJ_T0085506.1 MGP_NODShiLtJ_G0032666.1 mouse_genomes_project 7 124388985 124389508 + Adm protein_coding retained_intron MGP_NODShiLtJ_T0086005.1 MGP_NODShiLtJ_G0032777.1 mouse_genomes_project 7 140661797 140693407 + MGP_NODShiLtJ_P0086005 Il21r protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086006.1 MGP_NODShiLtJ_G0032777.1 mouse_genomes_project 7 140684015 140695198 + MGP_NODShiLtJ_P0086006 Il21r protein_coding protein_coding MGP_NODShiLtJ_T0087198.1 MGP_NODShiLtJ_G0033035.1 mouse_genomes_project 7 157761644 157764625 - MGP_NODShiLtJ_P0087198 Cend1 protein_coding protein_coding MGP_NODShiLtJ_T0087199.1 MGP_NODShiLtJ_G0033035.1 mouse_genomes_project 7 157761644 157764691 - MGP_NODShiLtJ_P0087199 Cend1 protein_coding protein_coding MGP_NODShiLtJ_T0087200.1 MGP_NODShiLtJ_G0033035.1 mouse_genomes_project 7 157761649 157764618 - MGP_NODShiLtJ_P0087200 Cend1 protein_coding protein_coding MGP_NODShiLtJ_T0087201.1 MGP_NODShiLtJ_G0033035.1 mouse_genomes_project 7 157761649 157764551 - MGP_NODShiLtJ_P0087201 Cend1 protein_coding protein_coding MGP_NODShiLtJ_T0002274.1 MGP_NODShiLtJ_G0002185.1 mouse_genomes_project 7 159859604 159861006 + TEC TEC MGP_NODShiLtJ_T0005212.1 MGP_NODShiLtJ_G0004420.1 mouse_genomes_project 7 124692385 124693252 + Gm16336 antisense antisense MGP_NODShiLtJ_T0085638.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129663489 130264335 - MGP_NODShiLtJ_P0085638 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085639.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129663961 130272789 - MGP_NODShiLtJ_P0085639 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085640.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129663961 130227167 - MGP_NODShiLtJ_P0085640 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085641.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129663961 130264335 - MGP_NODShiLtJ_P0085641 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085642.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129667073 130048186 - MGP_NODShiLtJ_P0085642 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085643.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129669275 130071231 - MGP_NODShiLtJ_P0085643 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085644.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129669275 130071196 - MGP_NODShiLtJ_P0085644 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085645.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129669288 130227167 - MGP_NODShiLtJ_P0085645 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085646.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129715242 130267645 - Sox6 protein_coding retained_intron MGP_NODShiLtJ_T0085647.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129715676 129803549 - Sox6 protein_coding processed_transcript MGP_NODShiLtJ_T0085648.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129744590 130272841 - Sox6 protein_coding retained_intron MGP_NODShiLtJ_T0085649.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129790598 129870594 - MGP_NODShiLtJ_P0085649 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085650.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 129802882 129870594 - Sox6 protein_coding retained_intron MGP_NODShiLtJ_T0085651.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 130000394 130084672 - MGP_NODShiLtJ_P0085651 Sox6 protein_coding protein_coding MGP_NODShiLtJ_T0085652.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 130031334 130268556 - Sox6 protein_coding processed_transcript MGP_NODShiLtJ_T0085653.1 MGP_NODShiLtJ_G0032695.1 mouse_genomes_project 7 130069262 130071242 - Sox6 protein_coding retained_intron MGP_NODShiLtJ_T0082889.1 MGP_NODShiLtJ_G0031897.1 mouse_genomes_project 7 36113441 36253108 + MGP_NODShiLtJ_P0082889 Pepd protein_coding protein_coding MGP_NODShiLtJ_T0082890.1 MGP_NODShiLtJ_G0031897.1 mouse_genomes_project 7 36149592 36227270 + MGP_NODShiLtJ_P0082890 Pepd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082891.1 MGP_NODShiLtJ_G0031897.1 mouse_genomes_project 7 36173529 36249123 + Pepd protein_coding retained_intron MGP_NODShiLtJ_T0082892.1 MGP_NODShiLtJ_G0031897.1 mouse_genomes_project 7 36173756 36185006 + Pepd protein_coding retained_intron MGP_NODShiLtJ_T0082893.1 MGP_NODShiLtJ_G0031897.1 mouse_genomes_project 7 36248870 36253107 + Pepd protein_coding retained_intron MGP_NODShiLtJ_T0082894.1 MGP_NODShiLtJ_G0031897.1 mouse_genomes_project 7 36251583 36252928 + Pepd protein_coding retained_intron MGP_NODShiLtJ_T0008929.1 MGP_NODShiLtJ_G0007187.1 mouse_genomes_project 7 140333094 140386648 - 4933440M02Rik lincRNA lincRNA MGP_NODShiLtJ_T0008930.1 MGP_NODShiLtJ_G0007187.1 mouse_genomes_project 7 140377968 140399338 - 4933440M02Rik lincRNA lincRNA MGP_NODShiLtJ_T0008931.1 MGP_NODShiLtJ_G0007187.1 mouse_genomes_project 7 140380107 140399354 - 4933440M02Rik lincRNA lincRNA MGP_NODShiLtJ_T0015816.1 MGP_NODShiLtJ_G0013924.1 mouse_genomes_project 7 157051065 157051552 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018265.1 MGP_NODShiLtJ_G0015563.1 mouse_genomes_project 7 150035484 150038751 - A130023I24Rik processed_transcript sense_intronic MGP_NODShiLtJ_T0018266.1 MGP_NODShiLtJ_G0015563.1 mouse_genomes_project 7 150035563 150037366 - A130023I24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0102068.1 MGP_NODShiLtJ_G0040235.1 mouse_genomes_project 7 9952511 9953476 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085119.1 MGP_NODShiLtJ_G0032460.1 mouse_genomes_project 7 115581494 115582439 - MGP_NODShiLtJ_P0085119 Olfr600 protein_coding protein_coding MGP_NODShiLtJ_T0084153.1 MGP_NODShiLtJ_G0032204.1 mouse_genomes_project 7 87470028 87484686 - MGP_NODShiLtJ_P0084153 Rlbp1 protein_coding protein_coding MGP_NODShiLtJ_T0084154.1 MGP_NODShiLtJ_G0032204.1 mouse_genomes_project 7 87470029 87484597 - MGP_NODShiLtJ_P0084154 Rlbp1 protein_coding protein_coding MGP_NODShiLtJ_T0084155.1 MGP_NODShiLtJ_G0032204.1 mouse_genomes_project 7 87470686 87472862 - Rlbp1 protein_coding retained_intron MGP_NODShiLtJ_T0084156.1 MGP_NODShiLtJ_G0032204.1 mouse_genomes_project 7 87471062 87481750 - MGP_NODShiLtJ_P0084156 Rlbp1 protein_coding protein_coding MGP_NODShiLtJ_T0084157.1 MGP_NODShiLtJ_G0032204.1 mouse_genomes_project 7 87472542 87484179 - MGP_NODShiLtJ_P0084157 Rlbp1 protein_coding protein_coding MGP_NODShiLtJ_T0084158.1 MGP_NODShiLtJ_G0032204.1 mouse_genomes_project 7 87476542 87484243 - MGP_NODShiLtJ_P0084158 Rlbp1 protein_coding protein_coding MGP_NODShiLtJ_T0084159.1 MGP_NODShiLtJ_G0032204.1 mouse_genomes_project 7 87479433 87484112 - MGP_NODShiLtJ_P0084159 Rlbp1 protein_coding protein_coding MGP_NODShiLtJ_T0084160.1 MGP_NODShiLtJ_G0032204.1 mouse_genomes_project 7 87481495 87484550 - MGP_NODShiLtJ_P0084160 Rlbp1 protein_coding protein_coding MGP_NODShiLtJ_T0015754.1 MGP_NODShiLtJ_G0013862.1 mouse_genomes_project 7 109049310 109049497 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005112.1 MGP_NODShiLtJ_G0004351.1 mouse_genomes_project 7 25084652 25086223 + 9130221H12Rik antisense antisense MGP_NODShiLtJ_T0005113.1 MGP_NODShiLtJ_G0004351.1 mouse_genomes_project 7 25084688 25086229 + 9130221H12Rik antisense antisense MGP_NODShiLtJ_T0087264.1 MGP_NODShiLtJ_G0033042.1 mouse_genomes_project 7 157810106 157813473 - MGP_NODShiLtJ_P0087264 Polr2l protein_coding protein_coding MGP_NODShiLtJ_T0082508.1 MGP_NODShiLtJ_G0031823.1 mouse_genomes_project 7 30879658 30921209 - MGP_NODShiLtJ_P0082508 Wdr62 protein_coding protein_coding MGP_NODShiLtJ_T0082509.1 MGP_NODShiLtJ_G0031823.1 mouse_genomes_project 7 30879658 30902164 - MGP_NODShiLtJ_P0082509 Wdr62 protein_coding protein_coding MGP_NODShiLtJ_T0082510.1 MGP_NODShiLtJ_G0031823.1 mouse_genomes_project 7 30879658 30921186 - MGP_NODShiLtJ_P0082510 Wdr62 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082511.1 MGP_NODShiLtJ_G0031823.1 mouse_genomes_project 7 30879663 30880404 - Wdr62 protein_coding processed_transcript MGP_NODShiLtJ_T0082512.1 MGP_NODShiLtJ_G0031823.1 mouse_genomes_project 7 30881217 30881799 - MGP_NODShiLtJ_P0082512 Wdr62 protein_coding protein_coding MGP_NODShiLtJ_T0082513.1 MGP_NODShiLtJ_G0031823.1 mouse_genomes_project 7 30884952 30891389 - Wdr62 protein_coding retained_intron MGP_NODShiLtJ_T0082514.1 MGP_NODShiLtJ_G0031823.1 mouse_genomes_project 7 30889335 30890079 - Wdr62 protein_coding retained_intron MGP_NODShiLtJ_T0002218.1 MGP_NODShiLtJ_G0002129.1 mouse_genomes_project 7 83665810 83668460 + TEC TEC MGP_NODShiLtJ_T0081099.1 MGP_NODShiLtJ_G0031388.1 mouse_genomes_project 7 2222131 2225885 + MGP_NODShiLtJ_P0081099 protein_coding protein_coding MGP_NODShiLtJ_T0005149.1 MGP_NODShiLtJ_G0004379.1 mouse_genomes_project 7 39662157 39662373 - antisense antisense MGP_NODShiLtJ_T0005150.1 MGP_NODShiLtJ_G0004379.1 mouse_genomes_project 7 39662353 39732043 - antisense antisense MGP_NODShiLtJ_T0099511.1 MGP_NODShiLtJ_G0037905.1 mouse_genomes_project 7 123431317 123431423 - Gm22822 snRNA snRNA MGP_NODShiLtJ_T0011584.1 MGP_NODShiLtJ_G0009717.1 mouse_genomes_project 7 137305831 137306100 + Gm26414 misc_RNA misc_RNA MGP_NODShiLtJ_T0085323.1 MGP_NODShiLtJ_G0032570.1 mouse_genomes_project 7 118718986 118726955 - MGP_NODShiLtJ_P0085323 Taf10 protein_coding protein_coding MGP_NODShiLtJ_T0085331.1 MGP_NODShiLtJ_G0032570.1 mouse_genomes_project 7 118722490 118726676 - Taf10 protein_coding retained_intron MGP_NODShiLtJ_T0085332.1 MGP_NODShiLtJ_G0032570.1 mouse_genomes_project 7 118722500 118726204 - Taf10 protein_coding retained_intron MGP_NODShiLtJ_T0085333.1 MGP_NODShiLtJ_G0032570.1 mouse_genomes_project 7 118722531 118726912 - MGP_NODShiLtJ_P0085333 Taf10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085334.1 MGP_NODShiLtJ_G0032570.1 mouse_genomes_project 7 118722831 118726936 - Taf10 protein_coding retained_intron MGP_NODShiLtJ_T0083755.1 MGP_NODShiLtJ_G0032126.1 mouse_genomes_project 7 56135445 56140155 - MGP_NODShiLtJ_P0083755 1700015G11Rik protein_coding protein_coding MGP_NODShiLtJ_T0083756.1 MGP_NODShiLtJ_G0032126.1 mouse_genomes_project 7 56135447 56140130 - MGP_NODShiLtJ_P0083756 1700015G11Rik protein_coding protein_coding MGP_NODShiLtJ_T0083757.1 MGP_NODShiLtJ_G0032126.1 mouse_genomes_project 7 56135449 56140122 - MGP_NODShiLtJ_P0083757 1700015G11Rik protein_coding protein_coding MGP_NODShiLtJ_T0083758.1 MGP_NODShiLtJ_G0032126.1 mouse_genomes_project 7 56135452 56140109 - MGP_NODShiLtJ_P0083758 1700015G11Rik protein_coding protein_coding MGP_NODShiLtJ_T0082455.1 MGP_NODShiLtJ_G0031807.1 mouse_genomes_project 7 30529656 30542710 - MGP_NODShiLtJ_P0082455 protein_coding protein_coding MGP_NODShiLtJ_T0082456.1 MGP_NODShiLtJ_G0031807.1 mouse_genomes_project 7 30530311 30555832 - MGP_NODShiLtJ_P0082456 protein_coding protein_coding MGP_NODShiLtJ_T0082457.1 MGP_NODShiLtJ_G0031807.1 mouse_genomes_project 7 30532842 30555689 - MGP_NODShiLtJ_P0082457 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082458.1 MGP_NODShiLtJ_G0031807.1 mouse_genomes_project 7 30536551 30555834 - protein_coding processed_transcript MGP_NODShiLtJ_T0005209.1 MGP_NODShiLtJ_G0004418.1 mouse_genomes_project 7 116959668 116969084 + Gm15133 antisense antisense MGP_NODShiLtJ_T0005210.1 MGP_NODShiLtJ_G0004418.1 mouse_genomes_project 7 116959669 116969255 + Gm15133 antisense antisense MGP_NODShiLtJ_T0015713.1 MGP_NODShiLtJ_G0013821.1 mouse_genomes_project 7 74472272 74473277 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081784.1 MGP_NODShiLtJ_G0031640.1 mouse_genomes_project 7 24096166 24112854 + MGP_NODShiLtJ_P0081784 Kcnn4 protein_coding protein_coding MGP_NODShiLtJ_T0081785.1 MGP_NODShiLtJ_G0031640.1 mouse_genomes_project 7 24096202 24112850 + MGP_NODShiLtJ_P0081785 Kcnn4 protein_coding protein_coding MGP_NODShiLtJ_T0081786.1 MGP_NODShiLtJ_G0031640.1 mouse_genomes_project 7 24096241 24112409 + MGP_NODShiLtJ_P0081786 Kcnn4 protein_coding protein_coding MGP_NODShiLtJ_T0081787.1 MGP_NODShiLtJ_G0031640.1 mouse_genomes_project 7 24107608 24112439 + Kcnn4 protein_coding retained_intron MGP_NODShiLtJ_T0081788.1 MGP_NODShiLtJ_G0031640.1 mouse_genomes_project 7 24110704 24114383 + Kcnn4 protein_coding retained_intron MGP_NODShiLtJ_T0086767.1 MGP_NODShiLtJ_G0032913.1 mouse_genomes_project 7 147177761 147179820 + MGP_NODShiLtJ_P0086767 Hmx3 protein_coding protein_coding MGP_NODShiLtJ_T0102171.1 MGP_NODShiLtJ_G0040337.1 mouse_genomes_project 7 94410367 94411242 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083186.1 MGP_NODShiLtJ_G0031976.1 mouse_genomes_project 7 47051856 47056584 - MGP_NODShiLtJ_P0083186 1700008O03Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083187.1 MGP_NODShiLtJ_G0031976.1 mouse_genomes_project 7 47053637 47068576 - MGP_NODShiLtJ_P0083187 1700008O03Rik protein_coding protein_coding MGP_NODShiLtJ_T0083188.1 MGP_NODShiLtJ_G0031976.1 mouse_genomes_project 7 47053693 47068060 - 1700008O03Rik protein_coding retained_intron MGP_NODShiLtJ_T0083189.1 MGP_NODShiLtJ_G0031976.1 mouse_genomes_project 7 47053831 47067146 - MGP_NODShiLtJ_P0083189 1700008O03Rik protein_coding protein_coding MGP_NODShiLtJ_T0083190.1 MGP_NODShiLtJ_G0031976.1 mouse_genomes_project 7 47056276 47079202 - 1700008O03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0083191.1 MGP_NODShiLtJ_G0031976.1 mouse_genomes_project 7 47072436 47079338 - 1700008O03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0085021.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114148661 114169259 + MGP_NODShiLtJ_P0085021 Xndc1 protein_coding protein_coding MGP_NODShiLtJ_T0085022.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114148670 114165750 + Xndc1 protein_coding retained_intron MGP_NODShiLtJ_T0085023.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114148672 114153591 + Xndc1 protein_coding processed_transcript MGP_NODShiLtJ_T0085024.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114148743 114163271 + MGP_NODShiLtJ_P0085024 Xndc1 protein_coding protein_coding MGP_NODShiLtJ_T0085027.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114148908 114168578 + MGP_NODShiLtJ_P0085027 Xndc1 protein_coding protein_coding MGP_NODShiLtJ_T0085031.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114160129 114164721 + Xndc1 protein_coding retained_intron MGP_NODShiLtJ_T0085032.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114164238 114169262 + MGP_NODShiLtJ_P0085032 Xndc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085033.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114166554 114168088 + Xndc1 protein_coding processed_transcript MGP_NODShiLtJ_T0085034.1 MGP_NODShiLtJ_G0032407.1 mouse_genomes_project 7 114166557 114168018 + Xndc1 protein_coding retained_intron MGP_NODShiLtJ_T0008828.1 MGP_NODShiLtJ_G0007122.1 mouse_genomes_project 7 79932405 79932710 - Gm28745 lincRNA lincRNA MGP_NODShiLtJ_T0100739.1 MGP_NODShiLtJ_G0039133.1 mouse_genomes_project 7 47907195 47907279 - Snord33 snoRNA snoRNA MGP_NODShiLtJ_T0086084.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141592612 141600736 - MGP_NODShiLtJ_P0086084 Sh2b1 protein_coding protein_coding MGP_NODShiLtJ_T0086085.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141592614 141600749 - MGP_NODShiLtJ_P0086085 Sh2b1 protein_coding protein_coding MGP_NODShiLtJ_T0086086.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141592615 141600776 - MGP_NODShiLtJ_P0086086 Sh2b1 protein_coding protein_coding MGP_NODShiLtJ_T0086087.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141592617 141600470 - MGP_NODShiLtJ_P0086087 Sh2b1 protein_coding protein_coding MGP_NODShiLtJ_T0086088.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141592617 141598715 - MGP_NODShiLtJ_P0086088 Sh2b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086089.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141592617 141600468 - MGP_NODShiLtJ_P0086089 Sh2b1 protein_coding protein_coding MGP_NODShiLtJ_T0086090.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141592623 141600696 - MGP_NODShiLtJ_P0086090 Sh2b1 protein_coding protein_coding MGP_NODShiLtJ_T0086091.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141594517 141595846 - Sh2b1 protein_coding processed_transcript MGP_NODShiLtJ_T0086092.1 MGP_NODShiLtJ_G0032789.1 mouse_genomes_project 7 141598438 141601070 - MGP_NODShiLtJ_P0086092 Sh2b1 protein_coding protein_coding MGP_NODShiLtJ_T0015761.1 MGP_NODShiLtJ_G0013869.1 mouse_genomes_project 7 110221393 110221710 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087016.1 MGP_NODShiLtJ_G0032976.1 mouse_genomes_project 7 156340994 156342050 + MGP_NODShiLtJ_P0087016 Olfr523 protein_coding protein_coding MGP_NODShiLtJ_T0081179.1 MGP_NODShiLtJ_G0031427.1 mouse_genomes_project 7 4612842 4619852 - MGP_NODShiLtJ_P0081179 Zfp954 protein_coding protein_coding MGP_NODShiLtJ_T0086081.1 MGP_NODShiLtJ_G0032788.1 mouse_genomes_project 7 141571479 141588725 - MGP_NODShiLtJ_P0086081 Atp2a1 protein_coding protein_coding MGP_NODShiLtJ_T0086082.1 MGP_NODShiLtJ_G0032788.1 mouse_genomes_project 7 141571481 141573267 - MGP_NODShiLtJ_P0086082 Atp2a1 protein_coding protein_coding MGP_NODShiLtJ_T0086083.1 MGP_NODShiLtJ_G0032788.1 mouse_genomes_project 7 141571722 141589424 - MGP_NODShiLtJ_P0086083 Atp2a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018233.1 MGP_NODShiLtJ_G0015545.1 mouse_genomes_project 7 89328286 89335734 + Platr32 processed_transcript processed_transcript MGP_NODShiLtJ_T0011587.1 MGP_NODShiLtJ_G0009720.1 mouse_genomes_project 7 152457444 152457752 - Gm24444 misc_RNA misc_RNA MGP_NODShiLtJ_T0082250.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28811722 28818948 + MGP_NODShiLtJ_P0082250 Paf1 protein_coding protein_coding MGP_NODShiLtJ_T0082251.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28811733 28812817 + Paf1 protein_coding retained_intron MGP_NODShiLtJ_T0082252.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28811812 28818943 + Paf1 protein_coding retained_intron MGP_NODShiLtJ_T0082253.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28811932 28814547 + Paf1 protein_coding retained_intron MGP_NODShiLtJ_T0082254.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28812229 28814465 + Paf1 protein_coding retained_intron MGP_NODShiLtJ_T0082255.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28813532 28814569 + Paf1 protein_coding retained_intron MGP_NODShiLtJ_T0082256.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28814194 28814849 + Paf1 protein_coding retained_intron MGP_NODShiLtJ_T0082257.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28814594 28818303 + Paf1 protein_coding retained_intron MGP_NODShiLtJ_T0082258.1 MGP_NODShiLtJ_G0031759.1 mouse_genomes_project 7 28817993 28818620 + Paf1 protein_coding processed_transcript MGP_NODShiLtJ_T0015789.1 MGP_NODShiLtJ_G0013897.1 mouse_genomes_project 7 137904245 137904755 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002187.1 MGP_NODShiLtJ_G0002099.1 mouse_genomes_project 7 60102234 60104457 + TEC TEC MGP_NODShiLtJ_T0084225.1 MGP_NODShiLtJ_G0032219.1 mouse_genomes_project 7 88267975 88289768 - MGP_NODShiLtJ_P0084225 Idh2 protein_coding protein_coding MGP_NODShiLtJ_T0084226.1 MGP_NODShiLtJ_G0032219.1 mouse_genomes_project 7 88267979 88289708 - MGP_NODShiLtJ_P0084226 Idh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084227.1 MGP_NODShiLtJ_G0032219.1 mouse_genomes_project 7 88268158 88271531 - Idh2 protein_coding retained_intron MGP_NODShiLtJ_T0084228.1 MGP_NODShiLtJ_G0032219.1 mouse_genomes_project 7 88268172 88269157 - Idh2 protein_coding retained_intron MGP_NODShiLtJ_T0084229.1 MGP_NODShiLtJ_G0032219.1 mouse_genomes_project 7 88268188 88289680 - MGP_NODShiLtJ_P0084229 Idh2 protein_coding protein_coding MGP_NODShiLtJ_T0084230.1 MGP_NODShiLtJ_G0032219.1 mouse_genomes_project 7 88269155 88274003 - MGP_NODShiLtJ_P0084230 Idh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084231.1 MGP_NODShiLtJ_G0032219.1 mouse_genomes_project 7 88271293 88272261 - Idh2 protein_coding retained_intron MGP_NODShiLtJ_T0102187.1 MGP_NODShiLtJ_G0040353.1 mouse_genomes_project 7 96022342 96022939 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081491.1 MGP_NODShiLtJ_G0031538.1 mouse_genomes_project 7 16177697 16192492 + MGP_NODShiLtJ_P0081491 Psg29 protein_coding protein_coding MGP_NODShiLtJ_T0002205.1 MGP_NODShiLtJ_G0002117.1 mouse_genomes_project 7 80799420 80801462 - TEC TEC MGP_NODShiLtJ_T0083590.1 MGP_NODShiLtJ_G0032074.1 mouse_genomes_project 7 48865303 48922951 - MGP_NODShiLtJ_P0083590 Abcc6 protein_coding protein_coding MGP_NODShiLtJ_T0083591.1 MGP_NODShiLtJ_G0032074.1 mouse_genomes_project 7 48865819 48866610 - Abcc6 protein_coding retained_intron MGP_NODShiLtJ_T0083592.1 MGP_NODShiLtJ_G0032074.1 mouse_genomes_project 7 48885998 48890391 - Abcc6 protein_coding retained_intron MGP_NODShiLtJ_T0015731.1 MGP_NODShiLtJ_G0013839.1 mouse_genomes_project 7 88429589 88431936 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085227.1 MGP_NODShiLtJ_G0032543.1 mouse_genomes_project 7 117877406 117878153 + MGP_NODShiLtJ_P0085227 Olfr679 protein_coding protein_coding MGP_NODShiLtJ_T0015649.1 MGP_NODShiLtJ_G0013757.1 mouse_genomes_project 7 35272947 35288936 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084410.1 MGP_NODShiLtJ_G0032247.1 mouse_genomes_project 7 89796759 89800770 - MGP_NODShiLtJ_P0084410 BC048679 protein_coding protein_coding MGP_NODShiLtJ_T0084411.1 MGP_NODShiLtJ_G0032247.1 mouse_genomes_project 7 89796759 89800770 - MGP_NODShiLtJ_P0084411 BC048679 protein_coding protein_coding MGP_NODShiLtJ_T0086433.1 MGP_NODShiLtJ_G0032851.1 mouse_genomes_project 7 142809449 142813331 + MGP_NODShiLtJ_P0086433 Tmem265 protein_coding protein_coding MGP_NODShiLtJ_T0086434.1 MGP_NODShiLtJ_G0032851.1 mouse_genomes_project 7 142809638 142814986 + MGP_NODShiLtJ_P0086434 Tmem265 protein_coding protein_coding MGP_NODShiLtJ_T0085072.1 MGP_NODShiLtJ_G0032417.1 mouse_genomes_project 7 114558157 114588040 + MGP_NODShiLtJ_P0085072 Rrm1 protein_coding protein_coding MGP_NODShiLtJ_T0084556.1 MGP_NODShiLtJ_G0032306.1 mouse_genomes_project 7 99840369 99841397 - MGP_NODShiLtJ_P0084556 protein_coding protein_coding MGP_NODShiLtJ_T0102085.1 MGP_NODShiLtJ_G0040252.1 mouse_genomes_project 7 12931890 12932465 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084727.1 MGP_NODShiLtJ_G0032345.1 mouse_genomes_project 7 109953077 110058792 - MGP_NODShiLtJ_P0084727 Acer3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084728.1 MGP_NODShiLtJ_G0032345.1 mouse_genomes_project 7 109953471 110058714 - MGP_NODShiLtJ_P0084728 Acer3 protein_coding protein_coding MGP_NODShiLtJ_T0084729.1 MGP_NODShiLtJ_G0032345.1 mouse_genomes_project 7 109959582 109964652 - Acer3 protein_coding retained_intron MGP_NODShiLtJ_T0084730.1 MGP_NODShiLtJ_G0032345.1 mouse_genomes_project 7 109990113 110058770 - MGP_NODShiLtJ_P0084730 Acer3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083378.1 MGP_NODShiLtJ_G0032021.1 mouse_genomes_project 7 47936863 47943382 + MGP_NODShiLtJ_P0083378 Pih1d1 protein_coding protein_coding MGP_NODShiLtJ_T0083379.1 MGP_NODShiLtJ_G0032021.1 mouse_genomes_project 7 47939252 47943382 + MGP_NODShiLtJ_P0083379 Pih1d1 protein_coding protein_coding MGP_NODShiLtJ_T0015743.1 MGP_NODShiLtJ_G0013851.1 mouse_genomes_project 7 96575005 96575920 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102199.1 MGP_NODShiLtJ_G0040365.1 mouse_genomes_project 7 116035885 116036171 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087202.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157764943 157773092 - MGP_NODShiLtJ_P0087202 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087203.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157764948 157773027 - Slc25a22 protein_coding retained_intron MGP_NODShiLtJ_T0087204.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157764948 157772831 - MGP_NODShiLtJ_P0087204 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087205.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157764948 157769794 - MGP_NODShiLtJ_P0087205 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087206.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157764948 157772837 - MGP_NODShiLtJ_P0087206 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087207.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157764951 157770541 - Slc25a22 protein_coding retained_intron MGP_NODShiLtJ_T0087208.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157764951 157772838 - MGP_NODShiLtJ_P0087208 Slc25a22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087209.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157764955 157767953 - MGP_NODShiLtJ_P0087209 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087210.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157766153 157767238 - Slc25a22 protein_coding retained_intron MGP_NODShiLtJ_T0087211.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157766219 157767259 - Slc25a22 protein_coding retained_intron MGP_NODShiLtJ_T0087212.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157766385 157766798 - MGP_NODShiLtJ_P0087212 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087213.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157766567 157768048 - Slc25a22 protein_coding retained_intron MGP_NODShiLtJ_T0087214.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157766775 157770597 - MGP_NODShiLtJ_P0087214 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087215.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157766825 157769623 - MGP_NODShiLtJ_P0087215 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087216.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157766838 157769515 - MGP_NODShiLtJ_P0087216 Slc25a22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087217.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157766842 157769207 - MGP_NODShiLtJ_P0087217 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087218.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157767092 157769170 - Slc25a22 protein_coding retained_intron MGP_NODShiLtJ_T0087219.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157767106 157772793 - MGP_NODShiLtJ_P0087219 Slc25a22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087220.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157767244 157770523 - Slc25a22 protein_coding processed_transcript MGP_NODShiLtJ_T0087221.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157767310 157772792 - MGP_NODShiLtJ_P0087221 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087222.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157767784 157770524 - Slc25a22 protein_coding retained_intron MGP_NODShiLtJ_T0087223.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157767900 157769800 - MGP_NODShiLtJ_P0087223 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087224.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157768796 157769804 - MGP_NODShiLtJ_P0087224 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087225.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157769129 157769743 - MGP_NODShiLtJ_P0087225 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0087226.1 MGP_NODShiLtJ_G0033036.1 mouse_genomes_project 7 157769161 157769794 - MGP_NODShiLtJ_P0087226 Slc25a22 protein_coding protein_coding MGP_NODShiLtJ_T0083087.1 MGP_NODShiLtJ_G0031946.1 mouse_genomes_project 7 46046937 46062897 + MGP_NODShiLtJ_P0083087 Etfb protein_coding protein_coding MGP_NODShiLtJ_T0083088.1 MGP_NODShiLtJ_G0031946.1 mouse_genomes_project 7 46046973 46062761 + MGP_NODShiLtJ_P0083088 Etfb protein_coding protein_coding MGP_NODShiLtJ_T0083090.1 MGP_NODShiLtJ_G0031946.1 mouse_genomes_project 7 46046984 46061670 + MGP_NODShiLtJ_P0083090 Etfb protein_coding protein_coding MGP_NODShiLtJ_T0083092.1 MGP_NODShiLtJ_G0031946.1 mouse_genomes_project 7 46047004 46062878 + MGP_NODShiLtJ_P0083092 Etfb protein_coding protein_coding MGP_NODShiLtJ_T0083093.1 MGP_NODShiLtJ_G0031946.1 mouse_genomes_project 7 46057988 46062878 + MGP_NODShiLtJ_P0083093 Etfb protein_coding protein_coding MGP_NODShiLtJ_T0083094.1 MGP_NODShiLtJ_G0031946.1 mouse_genomes_project 7 46061597 46062877 + Etfb protein_coding processed_transcript MGP_NODShiLtJ_T0083095.1 MGP_NODShiLtJ_G0031946.1 mouse_genomes_project 7 46062132 46062880 + Etfb protein_coding processed_transcript MGP_NODShiLtJ_T0015653.1 MGP_NODShiLtJ_G0013761.1 mouse_genomes_project 7 37546688 37547663 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084423.1 MGP_NODShiLtJ_G0032252.1 mouse_genomes_project 7 90125159 90165832 - MGP_NODShiLtJ_P0084423 Btbd1 protein_coding protein_coding MGP_NODShiLtJ_T0084479.1 MGP_NODShiLtJ_G0032267.1 mouse_genomes_project 7 92272356 92273599 + MGP_NODShiLtJ_P0084479 protein_coding protein_coding MGP_NODShiLtJ_T0015603.1 MGP_NODShiLtJ_G0013711.1 mouse_genomes_project 7 23870628 23877389 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011579.1 MGP_NODShiLtJ_G0009712.1 mouse_genomes_project 7 87446329 87446587 - Gm24224 misc_RNA misc_RNA MGP_NODShiLtJ_T0081470.1 MGP_NODShiLtJ_G0031531.1 mouse_genomes_project 7 15881463 15885607 + MGP_NODShiLtJ_P0081470 Pnmal2 protein_coding protein_coding MGP_NODShiLtJ_T0015557.1 MGP_NODShiLtJ_G0013665.1 mouse_genomes_project 7 1217043 1217197 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008717.1 MGP_NODShiLtJ_G0007033.1 mouse_genomes_project 7 23854 48644 + lincRNA lincRNA MGP_NODShiLtJ_T0002196.1 MGP_NODShiLtJ_G0002108.1 mouse_genomes_project 7 70646204 70646357 + TEC TEC MGP_NODShiLtJ_T0082986.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 38855426 38863250 - MGP_NODShiLtJ_P0082986 Zfp536 protein_coding protein_coding MGP_NODShiLtJ_T0082987.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 38862373 39168020 - MGP_NODShiLtJ_P0082987 Zfp536 protein_coding protein_coding MGP_NODShiLtJ_T0082988.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 38862378 39168360 - MGP_NODShiLtJ_P0082988 Zfp536 protein_coding protein_coding MGP_NODShiLtJ_T0082989.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 38862391 39169378 - MGP_NODShiLtJ_P0082989 Zfp536 protein_coding protein_coding MGP_NODShiLtJ_T0082990.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 38862446 39172212 - MGP_NODShiLtJ_P0082990 Zfp536 protein_coding protein_coding MGP_NODShiLtJ_T0082991.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 38954008 39169180 - MGP_NODShiLtJ_P0082991 Zfp536 protein_coding protein_coding MGP_NODShiLtJ_T0082992.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 38954138 39172980 - MGP_NODShiLtJ_P0082992 Zfp536 protein_coding protein_coding MGP_NODShiLtJ_T0082993.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 39107079 39172916 - Zfp536 protein_coding processed_transcript MGP_NODShiLtJ_T0082994.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 39113323 39172901 - Zfp536 protein_coding retained_intron MGP_NODShiLtJ_T0082995.1 MGP_NODShiLtJ_G0031915.1 mouse_genomes_project 7 39171718 39172922 - Zfp536 protein_coding retained_intron MGP_NODShiLtJ_T0102069.1 MGP_NODShiLtJ_G0040236.1 mouse_genomes_project 7 10033043 10033331 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102062.1 MGP_NODShiLtJ_G0040229.1 mouse_genomes_project 7 8445746 8446120 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008733.1 MGP_NODShiLtJ_G0007047.1 mouse_genomes_project 7 19001762 19006782 - Gm26890 lincRNA lincRNA MGP_NODShiLtJ_T0082030.1 MGP_NODShiLtJ_G0031696.1 mouse_genomes_project 7 25932814 26223620 + MGP_NODShiLtJ_P0082030 protein_coding protein_coding MGP_NODShiLtJ_T0087327.1 MGP_NODShiLtJ_G0033061.1 mouse_genomes_project 7 158832276 158843902 - MGP_NODShiLtJ_P0087327 Ctsd protein_coding protein_coding MGP_NODShiLtJ_T0087328.1 MGP_NODShiLtJ_G0033061.1 mouse_genomes_project 7 158837144 158849273 - MGP_NODShiLtJ_P0087328 Ctsd protein_coding protein_coding MGP_NODShiLtJ_T0087329.1 MGP_NODShiLtJ_G0033061.1 mouse_genomes_project 7 158837163 158849054 - MGP_NODShiLtJ_P0087329 Ctsd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087330.1 MGP_NODShiLtJ_G0033061.1 mouse_genomes_project 7 158844428 158849054 - Ctsd protein_coding retained_intron MGP_NODShiLtJ_T0008925.1 MGP_NODShiLtJ_G0007183.1 mouse_genomes_project 7 136388459 136390148 + 1700025J12Rik lincRNA lincRNA MGP_NODShiLtJ_T0085736.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133236764 133351070 + MGP_NODShiLtJ_P0085736 9030624J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0085737.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133237256 133280885 + 9030624J02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0085738.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133237271 133349583 + MGP_NODShiLtJ_P0085738 9030624J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0085739.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133237271 133258976 + MGP_NODShiLtJ_P0085739 9030624J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0085740.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133237271 133349593 + MGP_NODShiLtJ_P0085740 9030624J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0085741.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133237273 133244869 + 9030624J02Rik protein_coding retained_intron MGP_NODShiLtJ_T0085742.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133245100 133263374 + 9030624J02Rik protein_coding retained_intron MGP_NODShiLtJ_T0085743.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133249663 133251220 + 9030624J02Rik protein_coding retained_intron MGP_NODShiLtJ_T0085744.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133260953 133349591 + MGP_NODShiLtJ_P0085744 9030624J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0085745.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133291398 133334320 + MGP_NODShiLtJ_P0085745 9030624J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0085746.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133301745 133342099 + 9030624J02Rik protein_coding retained_intron MGP_NODShiLtJ_T0085747.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133315009 133321697 + 9030624J02Rik protein_coding retained_intron MGP_NODShiLtJ_T0085748.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133329912 133334544 + 9030624J02Rik protein_coding retained_intron MGP_NODShiLtJ_T0085749.1 MGP_NODShiLtJ_G0032712.1 mouse_genomes_project 7 133332697 133349403 + 9030624J02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0015615.1 MGP_NODShiLtJ_G0013723.1 mouse_genomes_project 7 25820681 25821033 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083882.1 MGP_NODShiLtJ_G0032152.1 mouse_genomes_project 7 70726738 70742199 + Mtmr10 protein_coding retained_intron MGP_NODShiLtJ_T0083883.1 MGP_NODShiLtJ_G0032152.1 mouse_genomes_project 7 70726755 70780807 + MGP_NODShiLtJ_P0083883 Mtmr10 protein_coding protein_coding MGP_NODShiLtJ_T0083884.1 MGP_NODShiLtJ_G0032152.1 mouse_genomes_project 7 70726867 70778030 + MGP_NODShiLtJ_P0083884 Mtmr10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083885.1 MGP_NODShiLtJ_G0032152.1 mouse_genomes_project 7 70739658 70761135 + MGP_NODShiLtJ_P0083885 Mtmr10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082453.1 MGP_NODShiLtJ_G0031806.1 mouse_genomes_project 7 30505232 30513610 + MGP_NODShiLtJ_P0082453 Zfp383 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082454.1 MGP_NODShiLtJ_G0031806.1 mouse_genomes_project 7 30505513 30513604 + MGP_NODShiLtJ_P0082454 Zfp383 protein_coding protein_coding MGP_NODShiLtJ_T0082692.1 MGP_NODShiLtJ_G0031860.1 mouse_genomes_project 7 31507566 31512994 - MGP_NODShiLtJ_P0082692 Ffar2 protein_coding protein_coding MGP_NODShiLtJ_T0082693.1 MGP_NODShiLtJ_G0031860.1 mouse_genomes_project 7 31507575 31510358 - MGP_NODShiLtJ_P0082693 Ffar2 protein_coding protein_coding MGP_NODShiLtJ_T0082694.1 MGP_NODShiLtJ_G0031860.1 mouse_genomes_project 7 31508334 31510867 - MGP_NODShiLtJ_P0082694 Ffar2 protein_coding protein_coding MGP_NODShiLtJ_T0082695.1 MGP_NODShiLtJ_G0031860.1 mouse_genomes_project 7 31508786 31510357 - MGP_NODShiLtJ_P0082695 Ffar2 protein_coding protein_coding MGP_NODShiLtJ_T0082696.1 MGP_NODShiLtJ_G0031860.1 mouse_genomes_project 7 31508904 31510196 - MGP_NODShiLtJ_P0082696 Ffar2 protein_coding protein_coding MGP_NODShiLtJ_T0082697.1 MGP_NODShiLtJ_G0031860.1 mouse_genomes_project 7 31508931 31510366 - MGP_NODShiLtJ_P0082697 Ffar2 protein_coding protein_coding MGP_NODShiLtJ_T0082846.1 MGP_NODShiLtJ_G0031890.1 mouse_genomes_project 7 35298224 35313215 - MGP_NODShiLtJ_P0082846 Pdcd2l protein_coding protein_coding MGP_NODShiLtJ_T0082847.1 MGP_NODShiLtJ_G0031890.1 mouse_genomes_project 7 35298358 35313162 - MGP_NODShiLtJ_P0082847 Pdcd2l protein_coding protein_coding MGP_NODShiLtJ_T0082848.1 MGP_NODShiLtJ_G0031890.1 mouse_genomes_project 7 35303390 35309213 - Pdcd2l protein_coding retained_intron MGP_NODShiLtJ_T0082849.1 MGP_NODShiLtJ_G0031890.1 mouse_genomes_project 7 35309274 35312700 - Pdcd2l protein_coding processed_transcript MGP_NODShiLtJ_T0102163.1 MGP_NODShiLtJ_G0040329.1 mouse_genomes_project 7 93402899 93405024 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085608.1 MGP_NODShiLtJ_G0032687.1 mouse_genomes_project 7 128088497 128162492 - MGP_NODShiLtJ_P0085608 Rras2 protein_coding protein_coding MGP_NODShiLtJ_T0085471.1 MGP_NODShiLtJ_G0032658.1 mouse_genomes_project 7 123562033 123567124 - Dennd5a protein_coding retained_intron MGP_NODShiLtJ_T0085472.1 MGP_NODShiLtJ_G0032658.1 mouse_genomes_project 7 123562033 123640720 - MGP_NODShiLtJ_P0085472 Dennd5a protein_coding protein_coding MGP_NODShiLtJ_T0085473.1 MGP_NODShiLtJ_G0032658.1 mouse_genomes_project 7 123562033 123640790 - MGP_NODShiLtJ_P0085473 Dennd5a protein_coding protein_coding MGP_NODShiLtJ_T0085474.1 MGP_NODShiLtJ_G0032658.1 mouse_genomes_project 7 123566804 123567981 - Dennd5a protein_coding retained_intron MGP_NODShiLtJ_T0085475.1 MGP_NODShiLtJ_G0032658.1 mouse_genomes_project 7 123569457 123570850 - Dennd5a protein_coding retained_intron MGP_NODShiLtJ_T0085476.1 MGP_NODShiLtJ_G0032658.1 mouse_genomes_project 7 123577688 123591385 - Dennd5a protein_coding retained_intron MGP_NODShiLtJ_T0085477.1 MGP_NODShiLtJ_G0032658.1 mouse_genomes_project 7 123593609 123599075 - Dennd5a protein_coding processed_transcript MGP_NODShiLtJ_T0085478.1 MGP_NODShiLtJ_G0032658.1 mouse_genomes_project 7 123608900 123640643 - Dennd5a protein_coding processed_transcript MGP_NODShiLtJ_T0083338.1 MGP_NODShiLtJ_G0032002.1 mouse_genomes_project 7 47658736 47663281 + MGP_NODShiLtJ_P0083338 Fuz protein_coding protein_coding MGP_NODShiLtJ_T0081217.1 MGP_NODShiLtJ_G0031455.1 mouse_genomes_project 7 10787110 10810415 - MGP_NODShiLtJ_P0081217 protein_coding protein_coding MGP_NODShiLtJ_T0005242.1 MGP_NODShiLtJ_G0004442.1 mouse_genomes_project 7 143530390 143536377 - Gm44850 antisense antisense MGP_NODShiLtJ_T0002204.1 MGP_NODShiLtJ_G0002116.1 mouse_genomes_project 7 80763374 80765029 + TEC TEC MGP_NODShiLtJ_T0085514.1 MGP_NODShiLtJ_G0032668.1 mouse_genomes_project 7 124585891 124587061 - Rnf141 protein_coding retained_intron MGP_NODShiLtJ_T0085515.1 MGP_NODShiLtJ_G0032668.1 mouse_genomes_project 7 124586073 124606660 - MGP_NODShiLtJ_P0085515 Rnf141 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085516.1 MGP_NODShiLtJ_G0032668.1 mouse_genomes_project 7 124598845 124631152 - MGP_NODShiLtJ_P0085516 Rnf141 protein_coding protein_coding MGP_NODShiLtJ_T0085517.1 MGP_NODShiLtJ_G0032668.1 mouse_genomes_project 7 124600901 124631090 - MGP_NODShiLtJ_P0085517 Rnf141 protein_coding protein_coding MGP_NODShiLtJ_T0085518.1 MGP_NODShiLtJ_G0032668.1 mouse_genomes_project 7 124601773 124606606 - MGP_NODShiLtJ_P0085518 Rnf141 protein_coding protein_coding MGP_NODShiLtJ_T0085519.1 MGP_NODShiLtJ_G0032668.1 mouse_genomes_project 7 124601909 124606931 - Rnf141 protein_coding retained_intron MGP_NODShiLtJ_T0085520.1 MGP_NODShiLtJ_G0032668.1 mouse_genomes_project 7 124618425 124631142 - Rnf141 protein_coding processed_transcript MGP_NODShiLtJ_T0085521.1 MGP_NODShiLtJ_G0032668.1 mouse_genomes_project 7 124620968 124630897 - MGP_NODShiLtJ_P0085521 Rnf141 protein_coding protein_coding MGP_NODShiLtJ_T0002259.1 MGP_NODShiLtJ_G0002170.1 mouse_genomes_project 7 142108205 142110002 + TEC TEC MGP_NODShiLtJ_T0015567.1 MGP_NODShiLtJ_G0013675.1 mouse_genomes_project 7 3224176 3225131 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085283.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118607440 118613637 - MGP_NODShiLtJ_P0085283 Arfip2 protein_coding protein_coding MGP_NODShiLtJ_T0085284.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118607445 118613135 - Arfip2 protein_coding retained_intron MGP_NODShiLtJ_T0085285.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118608861 118613535 - MGP_NODShiLtJ_P0085285 Arfip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085286.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118608864 118611126 - Arfip2 protein_coding processed_transcript MGP_NODShiLtJ_T0085287.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118608896 118613558 - MGP_NODShiLtJ_P0085287 Arfip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085288.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118608897 118613572 - MGP_NODShiLtJ_P0085288 Arfip2 protein_coding protein_coding MGP_NODShiLtJ_T0085289.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118610125 118611269 - Arfip2 protein_coding processed_transcript MGP_NODShiLtJ_T0085290.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118610343 118611139 - Arfip2 protein_coding processed_transcript MGP_NODShiLtJ_T0085291.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118610411 118613529 - MGP_NODShiLtJ_P0085291 Arfip2 protein_coding protein_coding MGP_NODShiLtJ_T0085292.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118611071 118613556 - MGP_NODShiLtJ_P0085292 Arfip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085293.1 MGP_NODShiLtJ_G0032565.1 mouse_genomes_project 7 118611808 118613561 - Arfip2 protein_coding retained_intron MGP_NODShiLtJ_T0083046.1 MGP_NODShiLtJ_G0031931.1 mouse_genomes_project 7 43645858 43659660 + MGP_NODShiLtJ_P0083046 Zfp788 protein_coding protein_coding MGP_NODShiLtJ_T0083047.1 MGP_NODShiLtJ_G0031931.1 mouse_genomes_project 7 43646186 43662990 + MGP_NODShiLtJ_P0083047 Zfp788 protein_coding protein_coding MGP_NODShiLtJ_T0083048.1 MGP_NODShiLtJ_G0031931.1 mouse_genomes_project 7 43646211 43660470 + MGP_NODShiLtJ_P0083048 Zfp788 protein_coding protein_coding MGP_NODShiLtJ_T0083049.1 MGP_NODShiLtJ_G0031931.1 mouse_genomes_project 7 43646213 43661109 + MGP_NODShiLtJ_P0083049 Zfp788 protein_coding protein_coding MGP_NODShiLtJ_T0083050.1 MGP_NODShiLtJ_G0031931.1 mouse_genomes_project 7 43646219 43663043 + MGP_NODShiLtJ_P0083050 Zfp788 protein_coding protein_coding MGP_NODShiLtJ_T0083051.1 MGP_NODShiLtJ_G0031931.1 mouse_genomes_project 7 43646232 43663807 + MGP_NODShiLtJ_P0083051 Zfp788 protein_coding protein_coding MGP_NODShiLtJ_T0083052.1 MGP_NODShiLtJ_G0031931.1 mouse_genomes_project 7 43659695 43662708 + MGP_NODShiLtJ_P0083052 Zfp788 protein_coding protein_coding MGP_NODShiLtJ_T0085507.1 MGP_NODShiLtJ_G0032667.1 mouse_genomes_project 7 124552413 124597228 + MGP_NODShiLtJ_P0085507 Ampd3 protein_coding protein_coding MGP_NODShiLtJ_T0085508.1 MGP_NODShiLtJ_G0032667.1 mouse_genomes_project 7 124552538 124576928 + Ampd3 protein_coding processed_transcript MGP_NODShiLtJ_T0085509.1 MGP_NODShiLtJ_G0032667.1 mouse_genomes_project 7 124556789 124597714 + MGP_NODShiLtJ_P0085509 Ampd3 protein_coding protein_coding MGP_NODShiLtJ_T0085510.1 MGP_NODShiLtJ_G0032667.1 mouse_genomes_project 7 124556973 124580374 + Ampd3 protein_coding retained_intron MGP_NODShiLtJ_T0085511.1 MGP_NODShiLtJ_G0032667.1 mouse_genomes_project 7 124557861 124574447 + MGP_NODShiLtJ_P0085511 Ampd3 protein_coding protein_coding MGP_NODShiLtJ_T0085512.1 MGP_NODShiLtJ_G0032667.1 mouse_genomes_project 7 124558433 124574369 + MGP_NODShiLtJ_P0085512 Ampd3 protein_coding protein_coding MGP_NODShiLtJ_T0085513.1 MGP_NODShiLtJ_G0032667.1 mouse_genomes_project 7 124561879 124576973 + MGP_NODShiLtJ_P0085513 Ampd3 protein_coding protein_coding MGP_NODShiLtJ_T0083736.1 MGP_NODShiLtJ_G0032119.1 mouse_genomes_project 7 53851759 54467703 + MGP_NODShiLtJ_P0083736 Nell1 protein_coding protein_coding MGP_NODShiLtJ_T0083737.1 MGP_NODShiLtJ_G0032119.1 mouse_genomes_project 7 53851759 54813300 + MGP_NODShiLtJ_P0083737 Nell1 protein_coding protein_coding MGP_NODShiLtJ_T0083738.1 MGP_NODShiLtJ_G0032119.1 mouse_genomes_project 7 53851964 54155373 + Nell1 protein_coding retained_intron MGP_NODShiLtJ_T0083739.1 MGP_NODShiLtJ_G0032119.1 mouse_genomes_project 7 53852229 54811400 + MGP_NODShiLtJ_P0083739 Nell1 protein_coding protein_coding MGP_NODShiLtJ_T0083740.1 MGP_NODShiLtJ_G0032119.1 mouse_genomes_project 7 53984647 54111742 + Nell1 protein_coding processed_transcript MGP_NODShiLtJ_T0085871.1 MGP_NODShiLtJ_G0032748.1 mouse_genomes_project 7 135824057 135835394 - MGP_NODShiLtJ_P0085871 Igsf6 protein_coding protein_coding MGP_NODShiLtJ_T0082436.1 MGP_NODShiLtJ_G0031802.1 mouse_genomes_project 7 30410140 30428901 + MGP_NODShiLtJ_P0082436 Zfp790 protein_coding protein_coding MGP_NODShiLtJ_T0082437.1 MGP_NODShiLtJ_G0031802.1 mouse_genomes_project 7 30410140 30428901 + MGP_NODShiLtJ_P0082437 Zfp790 protein_coding protein_coding MGP_NODShiLtJ_T0081829.1 MGP_NODShiLtJ_G0031650.1 mouse_genomes_project 7 24321802 24345353 + MGP_NODShiLtJ_P0081829 Ethe1 protein_coding protein_coding MGP_NODShiLtJ_T0085798.1 MGP_NODShiLtJ_G0032727.1 mouse_genomes_project 7 134380479 134439881 + MGP_NODShiLtJ_P0085798 2610020H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0085799.1 MGP_NODShiLtJ_G0032727.1 mouse_genomes_project 7 134380483 134439881 + MGP_NODShiLtJ_P0085799 2610020H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0085800.1 MGP_NODShiLtJ_G0032727.1 mouse_genomes_project 7 134380624 134407395 + 2610020H08Rik protein_coding retained_intron MGP_NODShiLtJ_T0085801.1 MGP_NODShiLtJ_G0032727.1 mouse_genomes_project 7 134380853 134442469 + MGP_NODShiLtJ_P0085801 2610020H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0085802.1 MGP_NODShiLtJ_G0032727.1 mouse_genomes_project 7 134412283 134421601 + 2610020H08Rik protein_coding processed_transcript MGP_NODShiLtJ_T0085803.1 MGP_NODShiLtJ_G0032727.1 mouse_genomes_project 7 134414371 134416831 + 2610020H08Rik protein_coding retained_intron MGP_NODShiLtJ_T0085804.1 MGP_NODShiLtJ_G0032727.1 mouse_genomes_project 7 134423115 134434977 + 2610020H08Rik protein_coding processed_transcript MGP_NODShiLtJ_T0085805.1 MGP_NODShiLtJ_G0032727.1 mouse_genomes_project 7 134435143 134436374 + 2610020H08Rik protein_coding retained_intron MGP_NODShiLtJ_T0100763.1 MGP_NODShiLtJ_G0039157.1 mouse_genomes_project 7 111285968 111286113 - Snord15b snoRNA snoRNA MGP_NODShiLtJ_T0080890.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632181 636318 + MGP_NODShiLtJ_P0080890 Rps9 protein_coding protein_coding MGP_NODShiLtJ_T0080891.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632226 636316 + MGP_NODShiLtJ_P0080891 Rps9 protein_coding protein_coding MGP_NODShiLtJ_T0080892.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632229 633066 + Rps9 protein_coding retained_intron MGP_NODShiLtJ_T0080893.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632230 632910 + MGP_NODShiLtJ_P0080893 Rps9 protein_coding protein_coding MGP_NODShiLtJ_T0080894.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632236 633653 + Rps9 protein_coding retained_intron MGP_NODShiLtJ_T0080895.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632240 636281 + MGP_NODShiLtJ_P0080895 Rps9 protein_coding protein_coding MGP_NODShiLtJ_T0080896.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632508 636297 + MGP_NODShiLtJ_P0080896 Rps9 protein_coding protein_coding MGP_NODShiLtJ_T0080897.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632513 635806 + MGP_NODShiLtJ_P0080897 Rps9 protein_coding protein_coding MGP_NODShiLtJ_T0080898.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 632552 636315 + MGP_NODShiLtJ_P0080898 Rps9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080899.1 MGP_NODShiLtJ_G0031341.1 mouse_genomes_project 7 633839 635653 + Rps9 protein_coding retained_intron MGP_NODShiLtJ_T0002228.1 MGP_NODShiLtJ_G0002139.1 mouse_genomes_project 7 87615159 87616198 + TEC TEC MGP_NODShiLtJ_T0082381.1 MGP_NODShiLtJ_G0031788.1 mouse_genomes_project 7 29685583 29693566 - MGP_NODShiLtJ_P0082381 Spred3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082382.1 MGP_NODShiLtJ_G0031788.1 mouse_genomes_project 7 29689980 29693898 - Spred3 protein_coding retained_intron MGP_NODShiLtJ_T0085235.1 MGP_NODShiLtJ_G0032551.1 mouse_genomes_project 7 118207136 118259217 + MGP_NODShiLtJ_P0085235 protein_coding protein_coding MGP_NODShiLtJ_T0010798.1 MGP_NODShiLtJ_G0008931.1 mouse_genomes_project 7 88083267 88083363 + Gm24541 miRNA miRNA MGP_NODShiLtJ_T0081569.1 MGP_NODShiLtJ_G0031567.1 mouse_genomes_project 7 18454316 18474900 - MGP_NODShiLtJ_P0081569 Gm4969 protein_coding protein_coding MGP_NODShiLtJ_T0081570.1 MGP_NODShiLtJ_G0031567.1 mouse_genomes_project 7 18456821 18474873 - MGP_NODShiLtJ_P0081570 Gm4969 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087165.1 MGP_NODShiLtJ_G0033028.1 mouse_genomes_project 7 157602938 157603741 - MGP_NODShiLtJ_P0087165 Sct protein_coding protein_coding MGP_NODShiLtJ_T0087166.1 MGP_NODShiLtJ_G0033028.1 mouse_genomes_project 7 157602961 157603739 - MGP_NODShiLtJ_P0087166 Sct protein_coding protein_coding MGP_NODShiLtJ_T0085821.1 MGP_NODShiLtJ_G0032733.1 mouse_genomes_project 7 134792137 134803724 + MGP_NODShiLtJ_P0085821 Anks4b protein_coding protein_coding MGP_NODShiLtJ_T0086883.1 MGP_NODShiLtJ_G0032941.1 mouse_genomes_project 7 151416961 151436846 - MGP_NODShiLtJ_P0086883 Clrn3 protein_coding protein_coding MGP_NODShiLtJ_T0005092.1 MGP_NODShiLtJ_G0004338.1 mouse_genomes_project 7 4420968 4448375 - antisense antisense MGP_NODShiLtJ_T0005093.1 MGP_NODShiLtJ_G0004338.1 mouse_genomes_project 7 4428666 4447408 - antisense antisense MGP_NODShiLtJ_T0005094.1 MGP_NODShiLtJ_G0004338.1 mouse_genomes_project 7 4448015 4449132 - antisense antisense MGP_NODShiLtJ_T0018275.1 MGP_NODShiLtJ_G0015568.1 mouse_genomes_project 7 159011566 159026815 - Nctc1 processed_transcript antisense MGP_NODShiLtJ_T0018276.1 MGP_NODShiLtJ_G0015568.1 mouse_genomes_project 7 159021918 159026815 - Nctc1 processed_transcript retained_intron MGP_NODShiLtJ_T0102142.1 MGP_NODShiLtJ_G0040308.1 mouse_genomes_project 7 46813290 46815384 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087168.1 MGP_NODShiLtJ_G0033030.1 mouse_genomes_project 7 157624258 157654811 - MGP_NODShiLtJ_P0087168 Deaf1 protein_coding protein_coding MGP_NODShiLtJ_T0087169.1 MGP_NODShiLtJ_G0033030.1 mouse_genomes_project 7 157624268 157651559 - MGP_NODShiLtJ_P0087169 Deaf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0005214.1 MGP_NODShiLtJ_G0004422.1 mouse_genomes_project 7 127537172 127566359 - Far1os antisense antisense MGP_NODShiLtJ_T0005215.1 MGP_NODShiLtJ_G0004422.1 mouse_genomes_project 7 127544702 127584107 - Far1os antisense antisense MGP_NODShiLtJ_T0083302.1 MGP_NODShiLtJ_G0031997.1 mouse_genomes_project 7 47601510 47609520 - Tbc1d17 protein_coding retained_intron MGP_NODShiLtJ_T0083303.1 MGP_NODShiLtJ_G0031997.1 mouse_genomes_project 7 47601633 47609684 - MGP_NODShiLtJ_P0083303 Tbc1d17 protein_coding protein_coding MGP_NODShiLtJ_T0083304.1 MGP_NODShiLtJ_G0031997.1 mouse_genomes_project 7 47601641 47609688 - MGP_NODShiLtJ_P0083304 Tbc1d17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083305.1 MGP_NODShiLtJ_G0031997.1 mouse_genomes_project 7 47601642 47609499 - Tbc1d17 protein_coding retained_intron MGP_NODShiLtJ_T0083306.1 MGP_NODShiLtJ_G0031997.1 mouse_genomes_project 7 47603988 47604933 - Tbc1d17 protein_coding retained_intron MGP_NODShiLtJ_T0083307.1 MGP_NODShiLtJ_G0031997.1 mouse_genomes_project 7 47605185 47606609 - Tbc1d17 protein_coding retained_intron MGP_NODShiLtJ_T0083308.1 MGP_NODShiLtJ_G0031997.1 mouse_genomes_project 7 47608634 47609504 - Tbc1d17 protein_coding retained_intron MGP_NODShiLtJ_T0083309.1 MGP_NODShiLtJ_G0031997.1 mouse_genomes_project 7 47608883 47609203 - Tbc1d17 protein_coding retained_intron MGP_NODShiLtJ_T0085835.1 MGP_NODShiLtJ_G0032738.1 mouse_genomes_project 7 135363499 135388882 + MGP_NODShiLtJ_P0085835 Uqcrc2 protein_coding protein_coding MGP_NODShiLtJ_T0085836.1 MGP_NODShiLtJ_G0032738.1 mouse_genomes_project 7 135363563 135371541 + Uqcrc2 protein_coding processed_transcript MGP_NODShiLtJ_T0085837.1 MGP_NODShiLtJ_G0032738.1 mouse_genomes_project 7 135363838 135373566 + Uqcrc2 protein_coding processed_transcript MGP_NODShiLtJ_T0085838.1 MGP_NODShiLtJ_G0032738.1 mouse_genomes_project 7 135365985 135388565 + Uqcrc2 protein_coding processed_transcript MGP_NODShiLtJ_T0085839.1 MGP_NODShiLtJ_G0032738.1 mouse_genomes_project 7 135373241 135379254 + Uqcrc2 protein_coding retained_intron MGP_NODShiLtJ_T0085840.1 MGP_NODShiLtJ_G0032738.1 mouse_genomes_project 7 135379603 135386183 + Uqcrc2 protein_coding retained_intron MGP_NODShiLtJ_T0080948.1 MGP_NODShiLtJ_G0031353.1 mouse_genomes_project 7 1402584 1412338 + MGP_NODShiLtJ_P0080948 Ncr1 protein_coding protein_coding MGP_NODShiLtJ_T0080949.1 MGP_NODShiLtJ_G0031353.1 mouse_genomes_project 7 1402629 1412338 + MGP_NODShiLtJ_P0080949 Ncr1 protein_coding protein_coding MGP_NODShiLtJ_T0085148.1 MGP_NODShiLtJ_G0032488.1 mouse_genomes_project 7 116264253 116275955 - MGP_NODShiLtJ_P0085148 Hbb-bt protein_coding protein_coding MGP_NODShiLtJ_T0085149.1 MGP_NODShiLtJ_G0032488.1 mouse_genomes_project 7 116273959 116277570 - Hbb-bt protein_coding retained_intron MGP_NODShiLtJ_T0018240.1 MGP_NODShiLtJ_G0015548.1 mouse_genomes_project 7 109911904 109914110 + Gm16938 processed_transcript processed_transcript MGP_NODShiLtJ_T0018241.1 MGP_NODShiLtJ_G0015548.1 mouse_genomes_project 7 109911951 109914110 + Gm16938 processed_transcript processed_transcript MGP_NODShiLtJ_T0018262.1 MGP_NODShiLtJ_G0015561.1 mouse_genomes_project 7 143820485 143836570 + Gm45019 processed_transcript lincRNA MGP_NODShiLtJ_T0018263.1 MGP_NODShiLtJ_G0015561.1 mouse_genomes_project 7 143835216 143836569 + Gm45019 processed_transcript retained_intron MGP_NODShiLtJ_T0085721.1 MGP_NODShiLtJ_G0032708.1 mouse_genomes_project 7 133008813 133063164 - MGP_NODShiLtJ_P0085721 Tmc7 protein_coding protein_coding MGP_NODShiLtJ_T0085722.1 MGP_NODShiLtJ_G0032708.1 mouse_genomes_project 7 133019660 133063114 - Tmc7 protein_coding retained_intron MGP_NODShiLtJ_T0085723.1 MGP_NODShiLtJ_G0032708.1 mouse_genomes_project 7 133037894 133040283 - Tmc7 protein_coding retained_intron MGP_NODShiLtJ_T0085724.1 MGP_NODShiLtJ_G0032708.1 mouse_genomes_project 7 133047467 133063137 - Tmc7 protein_coding processed_transcript MGP_NODShiLtJ_T0087316.1 MGP_NODShiLtJ_G0033055.1 mouse_genomes_project 7 158592299 158594290 + MGP_NODShiLtJ_P0087316 protein_coding protein_coding MGP_NODShiLtJ_T0018242.1 MGP_NODShiLtJ_G0015549.1 mouse_genomes_project 7 113321940 113330403 - Gm20476 processed_transcript processed_transcript MGP_NODShiLtJ_T0005111.1 MGP_NODShiLtJ_G0004350.1 mouse_genomes_project 7 25075332 25076895 + 4933430L12Rik antisense antisense MGP_NODShiLtJ_T0098081.1 MGP_NODShiLtJ_G0036493.1 mouse_genomes_project 7 91158773 91158881 - n-R5s154 rRNA rRNA MGP_NODShiLtJ_T0101189.1 MGP_NODShiLtJ_G0039500.1 mouse_genomes_project 7 28120022 28213284 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0010804.1 MGP_NODShiLtJ_G0008937.1 mouse_genomes_project 7 112826784 112826888 - Mir3102 miRNA miRNA MGP_NODShiLtJ_T0010819.1 MGP_NODShiLtJ_G0008952.1 mouse_genomes_project 7 143611970 143612037 - Mir3103 miRNA miRNA MGP_NODShiLtJ_T0015675.1 MGP_NODShiLtJ_G0013783.1 mouse_genomes_project 7 45114951 45115462 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097823.1 MGP_NODShiLtJ_G0036235.1 mouse_genomes_project 7 16680127 16680632 + pseudogene pseudogene MGP_NODShiLtJ_T0002152.1 MGP_NODShiLtJ_G0002064.1 mouse_genomes_project 7 16905168 16907340 - TEC TEC MGP_NODShiLtJ_T0015747.1 MGP_NODShiLtJ_G0013855.1 mouse_genomes_project 7 105291561 105291831 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085769.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134106569 134165641 + MGP_NODShiLtJ_P0085769 Acsm2 protein_coding protein_coding MGP_NODShiLtJ_T0085770.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134113582 134161552 + MGP_NODShiLtJ_P0085770 Acsm2 protein_coding protein_coding MGP_NODShiLtJ_T0085771.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134113797 134165641 + MGP_NODShiLtJ_P0085771 Acsm2 protein_coding protein_coding MGP_NODShiLtJ_T0085772.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134113801 134131841 + MGP_NODShiLtJ_P0085772 Acsm2 protein_coding protein_coding MGP_NODShiLtJ_T0085773.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134113875 134135564 + Acsm2 protein_coding processed_transcript MGP_NODShiLtJ_T0085774.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134116155 134160960 + MGP_NODShiLtJ_P0085774 Acsm2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085775.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134134306 134161121 + MGP_NODShiLtJ_P0085775 Acsm2 protein_coding protein_coding MGP_NODShiLtJ_T0085776.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134153801 134157504 + MGP_NODShiLtJ_P0085776 Acsm2 protein_coding protein_coding MGP_NODShiLtJ_T0085777.1 MGP_NODShiLtJ_G0032721.1 mouse_genomes_project 7 134155820 134156410 + Acsm2 protein_coding retained_intron MGP_NODShiLtJ_T0086369.1 MGP_NODShiLtJ_G0032835.1 mouse_genomes_project 7 142425336 142430455 + MGP_NODShiLtJ_P0086369 Zfp553 protein_coding protein_coding MGP_NODShiLtJ_T0086370.1 MGP_NODShiLtJ_G0032835.1 mouse_genomes_project 7 142425530 142430319 + MGP_NODShiLtJ_P0086370 Zfp553 protein_coding protein_coding MGP_NODShiLtJ_T0086371.1 MGP_NODShiLtJ_G0032835.1 mouse_genomes_project 7 142425569 142426396 + Zfp553 protein_coding retained_intron MGP_NODShiLtJ_T0015782.1 MGP_NODShiLtJ_G0013890.1 mouse_genomes_project 7 131150465 131151252 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083847.1 MGP_NODShiLtJ_G0032146.1 mouse_genomes_project 7 68686835 68689475 - MGP_NODShiLtJ_P0083847 Peg12 protein_coding protein_coding MGP_NODShiLtJ_T0086330.1 MGP_NODShiLtJ_G0032828.1 mouse_genomes_project 7 142268842 142271472 + MGP_NODShiLtJ_P0086330 AI467606 protein_coding protein_coding MGP_NODShiLtJ_T0086331.1 MGP_NODShiLtJ_G0032828.1 mouse_genomes_project 7 142268907 142270478 + MGP_NODShiLtJ_P0086331 AI467606 protein_coding protein_coding MGP_NODShiLtJ_T0081119.1 MGP_NODShiLtJ_G0031400.1 mouse_genomes_project 7 2605345 2618632 + MGP_NODShiLtJ_P0081119 Gm5065 protein_coding protein_coding MGP_NODShiLtJ_T0082555.1 MGP_NODShiLtJ_G0031831.1 mouse_genomes_project 7 31056585 31062751 + MGP_NODShiLtJ_P0082555 Tyrobp protein_coding protein_coding MGP_NODShiLtJ_T0005235.1 MGP_NODShiLtJ_G0004436.1 mouse_genomes_project 7 142748695 142751126 - 1700008J07Rik antisense antisense MGP_NODShiLtJ_T0011572.1 MGP_NODShiLtJ_G0009705.1 mouse_genomes_project 7 30957525 30957896 + Gm24757 misc_RNA misc_RNA MGP_NODShiLtJ_T0002150.1 MGP_NODShiLtJ_G0002062.1 mouse_genomes_project 7 15809029 15810720 - TEC TEC MGP_NODShiLtJ_T0081807.1 MGP_NODShiLtJ_G0031644.1 mouse_genomes_project 7 24212892 24237831 + MGP_NODShiLtJ_P0081807 Cadm4 protein_coding protein_coding MGP_NODShiLtJ_T0081808.1 MGP_NODShiLtJ_G0031644.1 mouse_genomes_project 7 24233248 24236085 + Cadm4 protein_coding processed_transcript MGP_NODShiLtJ_T0087043.1 MGP_NODShiLtJ_G0032999.1 mouse_genomes_project 7 157107222 157110092 + MGP_NODShiLtJ_P0087043 Urah protein_coding protein_coding MGP_NODShiLtJ_T0087044.1 MGP_NODShiLtJ_G0032999.1 mouse_genomes_project 7 157107483 157110171 + MGP_NODShiLtJ_P0087044 Urah protein_coding protein_coding MGP_NODShiLtJ_T0087045.1 MGP_NODShiLtJ_G0032999.1 mouse_genomes_project 7 157107501 157110176 + MGP_NODShiLtJ_P0087045 Urah protein_coding protein_coding MGP_NODShiLtJ_T0087046.1 MGP_NODShiLtJ_G0032999.1 mouse_genomes_project 7 157107538 157109273 + Urah protein_coding retained_intron MGP_NODShiLtJ_T0005127.1 MGP_NODShiLtJ_G0004361.1 mouse_genomes_project 7 31110286 31113696 - Nphs1os antisense antisense MGP_NODShiLtJ_T0101419.1 MGP_NODShiLtJ_G0039615.1 mouse_genomes_project 7 119365566 119369162 - translated_unprocessed_pseudogene translated_unprocessed_pseudogene MGP_NODShiLtJ_T0085411.1 MGP_NODShiLtJ_G0032631.1 mouse_genomes_project 7 122161538 122162546 + MGP_NODShiLtJ_P0085411 Olfr506 protein_coding protein_coding MGP_NODShiLtJ_T0011591.1 MGP_NODShiLtJ_G0009724.1 mouse_genomes_project 7 159786942 159787137 + Gm27389 misc_RNA misc_RNA MGP_NODShiLtJ_T0084695.1 MGP_NODShiLtJ_G0032338.1 mouse_genomes_project 7 109401229 109420473 - MGP_NODShiLtJ_P0084695 Aqp11 protein_coding protein_coding MGP_NODShiLtJ_T0084696.1 MGP_NODShiLtJ_G0032338.1 mouse_genomes_project 7 109403630 109420122 - MGP_NODShiLtJ_P0084696 Aqp11 protein_coding protein_coding MGP_NODShiLtJ_T0084697.1 MGP_NODShiLtJ_G0032338.1 mouse_genomes_project 7 109403798 109411544 - Aqp11 protein_coding retained_intron MGP_NODShiLtJ_T0084698.1 MGP_NODShiLtJ_G0032338.1 mouse_genomes_project 7 109404679 109415419 - Aqp11 protein_coding retained_intron MGP_NODShiLtJ_T0084699.1 MGP_NODShiLtJ_G0032338.1 mouse_genomes_project 7 109411206 109412661 - Aqp11 protein_coding processed_transcript MGP_NODShiLtJ_T0008732.1 MGP_NODShiLtJ_G0007046.1 mouse_genomes_project 7 18772833 18783997 - Gm26852 lincRNA lincRNA MGP_NODShiLtJ_T0015770.1 MGP_NODShiLtJ_G0013878.1 mouse_genomes_project 7 116447594 116450838 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015709.1 MGP_NODShiLtJ_G0013817.1 mouse_genomes_project 7 71653586 71654842 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081828.1 MGP_NODShiLtJ_G0031649.1 mouse_genomes_project 7 24318373 24321901 - MGP_NODShiLtJ_P0081828 Zfp575 protein_coding protein_coding MGP_NODShiLtJ_T0102094.1 MGP_NODShiLtJ_G0040261.1 mouse_genomes_project 7 13266160 13266550 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083024.1 MGP_NODShiLtJ_G0031922.1 mouse_genomes_project 7 41171637 41199264 + MGP_NODShiLtJ_P0083024 Zfp619 protein_coding protein_coding MGP_NODShiLtJ_T0084746.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110346717 110420657 - MGP_NODShiLtJ_P0084746 Emsy protein_coding protein_coding MGP_NODShiLtJ_T0084747.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110349222 110420424 - MGP_NODShiLtJ_P0084747 Emsy protein_coding protein_coding MGP_NODShiLtJ_T0084748.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110350886 110420429 - MGP_NODShiLtJ_P0084748 Emsy protein_coding protein_coding MGP_NODShiLtJ_T0084749.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110351552 110354518 - Emsy protein_coding retained_intron MGP_NODShiLtJ_T0084750.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110353781 110355298 - Emsy protein_coding processed_transcript MGP_NODShiLtJ_T0084751.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110355406 110374021 - MGP_NODShiLtJ_P0084751 Emsy protein_coding protein_coding MGP_NODShiLtJ_T0084752.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110356776 110363370 - Emsy protein_coding retained_intron MGP_NODShiLtJ_T0084753.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110357326 110376564 - MGP_NODShiLtJ_P0084753 Emsy protein_coding protein_coding MGP_NODShiLtJ_T0084754.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110361541 110363830 - Emsy protein_coding retained_intron MGP_NODShiLtJ_T0084755.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110363638 110420473 - MGP_NODShiLtJ_P0084755 Emsy protein_coding protein_coding MGP_NODShiLtJ_T0084756.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110392832 110420442 - MGP_NODShiLtJ_P0084756 Emsy protein_coding protein_coding MGP_NODShiLtJ_T0084757.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110400294 110408211 - MGP_NODShiLtJ_P0084757 Emsy protein_coding protein_coding MGP_NODShiLtJ_T0084758.1 MGP_NODShiLtJ_G0032349.1 mouse_genomes_project 7 110406071 110420661 - Emsy protein_coding retained_intron MGP_NODShiLtJ_T0085487.1 MGP_NODShiLtJ_G0032662.1 mouse_genomes_project 7 123753399 123788198 + MGP_NODShiLtJ_P0085487 Zfp143 protein_coding protein_coding MGP_NODShiLtJ_T0085488.1 MGP_NODShiLtJ_G0032662.1 mouse_genomes_project 7 123753407 123788193 + MGP_NODShiLtJ_P0085488 Zfp143 protein_coding protein_coding MGP_NODShiLtJ_T0083567.1 MGP_NODShiLtJ_G0032068.1 mouse_genomes_project 7 48711762 48751035 - MGP_NODShiLtJ_P0083567 Grin2d protein_coding protein_coding MGP_NODShiLtJ_T0083568.1 MGP_NODShiLtJ_G0032068.1 mouse_genomes_project 7 48750282 48754809 - MGP_NODShiLtJ_P0083568 Grin2d protein_coding protein_coding MGP_NODShiLtJ_T0082389.1 MGP_NODShiLtJ_G0031792.1 mouse_genomes_project 7 29793361 29802562 + MGP_NODShiLtJ_P0082389 Yif1b protein_coding protein_coding MGP_NODShiLtJ_T0082390.1 MGP_NODShiLtJ_G0031792.1 mouse_genomes_project 7 29793385 29802562 + MGP_NODShiLtJ_P0082390 Yif1b protein_coding protein_coding MGP_NODShiLtJ_T0082391.1 MGP_NODShiLtJ_G0031792.1 mouse_genomes_project 7 29793401 29799874 + MGP_NODShiLtJ_P0082391 Yif1b protein_coding protein_coding MGP_NODShiLtJ_T0082392.1 MGP_NODShiLtJ_G0031792.1 mouse_genomes_project 7 29793484 29802626 + MGP_NODShiLtJ_P0082392 Yif1b protein_coding protein_coding MGP_NODShiLtJ_T0082393.1 MGP_NODShiLtJ_G0031792.1 mouse_genomes_project 7 29793505 29801027 + Yif1b protein_coding processed_transcript MGP_NODShiLtJ_T0015627.1 MGP_NODShiLtJ_G0013735.1 mouse_genomes_project 7 30902780 30904348 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081546.1 MGP_NODShiLtJ_G0031564.1 mouse_genomes_project 7 18431331 18437912 + MGP_NODShiLtJ_P0081546 Dmwd protein_coding protein_coding MGP_NODShiLtJ_T0081547.1 MGP_NODShiLtJ_G0031564.1 mouse_genomes_project 7 18431362 18437912 + MGP_NODShiLtJ_P0081547 Dmwd protein_coding protein_coding MGP_NODShiLtJ_T0081548.1 MGP_NODShiLtJ_G0031564.1 mouse_genomes_project 7 18433096 18437911 + Dmwd protein_coding processed_transcript MGP_NODShiLtJ_T0081549.1 MGP_NODShiLtJ_G0031564.1 mouse_genomes_project 7 18433129 18437638 + Dmwd protein_coding processed_transcript MGP_NODShiLtJ_T0098078.1 MGP_NODShiLtJ_G0036490.1 mouse_genomes_project 7 36317012 36317131 + Gm22535 rRNA rRNA MGP_NODShiLtJ_T0015741.1 MGP_NODShiLtJ_G0013849.1 mouse_genomes_project 7 94757661 94758238 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008824.1 MGP_NODShiLtJ_G0007118.1 mouse_genomes_project 7 78504551 78514907 + lincRNA lincRNA MGP_NODShiLtJ_T0085170.1 MGP_NODShiLtJ_G0032509.1 mouse_genomes_project 7 116729390 116731684 - MGP_NODShiLtJ_P0085170 Ubqlnl protein_coding protein_coding MGP_NODShiLtJ_T0005086.1 MGP_NODShiLtJ_G0004334.1 mouse_genomes_project 7 1152510 1165232 - D030047H15Rik antisense antisense MGP_NODShiLtJ_T0008806.1 MGP_NODShiLtJ_G0007106.1 mouse_genomes_project 7 72109049 72145441 + BC046251 lincRNA lincRNA MGP_NODShiLtJ_T0008936.1 MGP_NODShiLtJ_G0007191.1 mouse_genomes_project 7 141467309 141470534 - Gm45142 lincRNA lincRNA MGP_NODShiLtJ_T0008937.1 MGP_NODShiLtJ_G0007191.1 mouse_genomes_project 7 141469559 141470556 - Gm45142 lincRNA lincRNA MGP_NODShiLtJ_T0085990.1 MGP_NODShiLtJ_G0032772.1 mouse_genomes_project 7 138402135 138427127 - MGP_NODShiLtJ_P0085990 Zkscan2 protein_coding protein_coding MGP_NODShiLtJ_T0085991.1 MGP_NODShiLtJ_G0032772.1 mouse_genomes_project 7 138404494 138407680 - Zkscan2 protein_coding retained_intron MGP_NODShiLtJ_T0085992.1 MGP_NODShiLtJ_G0032772.1 mouse_genomes_project 7 138406892 138411694 - MGP_NODShiLtJ_P0085992 Zkscan2 protein_coding protein_coding MGP_NODShiLtJ_T0085993.1 MGP_NODShiLtJ_G0032772.1 mouse_genomes_project 7 138420863 138427127 - MGP_NODShiLtJ_P0085993 Zkscan2 protein_coding protein_coding MGP_NODShiLtJ_T0085207.1 MGP_NODShiLtJ_G0032524.1 mouse_genomes_project 7 117206223 117207249 + MGP_NODShiLtJ_P0085207 Olfr654 protein_coding protein_coding MGP_NODShiLtJ_T0085095.1 MGP_NODShiLtJ_G0032438.1 mouse_genomes_project 7 114999541 115002734 + MGP_NODShiLtJ_P0085095 protein_coding protein_coding MGP_NODShiLtJ_T0082296.1 MGP_NODShiLtJ_G0031773.1 mouse_genomes_project 7 29234575 29237367 + MGP_NODShiLtJ_P0082296 Ccer2 protein_coding protein_coding MGP_NODShiLtJ_T0008952.1 MGP_NODShiLtJ_G0007199.1 mouse_genomes_project 7 142942428 142951878 + Gm44514 lincRNA lincRNA MGP_NODShiLtJ_T0008953.1 MGP_NODShiLtJ_G0007199.1 mouse_genomes_project 7 142948481 142952488 + Gm44514 lincRNA lincRNA MGP_NODShiLtJ_T0085358.1 MGP_NODShiLtJ_G0032585.1 mouse_genomes_project 7 120083834 120084782 + MGP_NODShiLtJ_P0085358 Olfr704 protein_coding protein_coding MGP_NODShiLtJ_T0081638.1 MGP_NODShiLtJ_G0031584.1 mouse_genomes_project 7 18802024 18812535 + MGP_NODShiLtJ_P0081638 Ckm protein_coding protein_coding MGP_NODShiLtJ_T0100742.1 MGP_NODShiLtJ_G0039136.1 mouse_genomes_project 7 63223169 63223303 + Gm23911 snoRNA snoRNA MGP_NODShiLtJ_T0086779.1 MGP_NODShiLtJ_G0032919.1 mouse_genomes_project 7 148247146 148266144 - MGP_NODShiLtJ_P0086779 Oat protein_coding protein_coding MGP_NODShiLtJ_T0100758.1 MGP_NODShiLtJ_G0039152.1 mouse_genomes_project 7 90310397 90310522 + Gm25907 snoRNA snoRNA MGP_NODShiLtJ_T0005261.1 MGP_NODShiLtJ_G0004456.1 mouse_genomes_project 7 160126525 160127691 + Gm15579 antisense antisense MGP_NODShiLtJ_T0102154.1 MGP_NODShiLtJ_G0040320.1 mouse_genomes_project 7 51844279 51845228 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008760.1 MGP_NODShiLtJ_G0007072.1 mouse_genomes_project 7 37129128 37130439 + Gm28514 lincRNA lincRNA MGP_NODShiLtJ_T0015797.1 MGP_NODShiLtJ_G0013905.1 mouse_genomes_project 7 141904946 141905308 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005091.1 MGP_NODShiLtJ_G0004337.1 mouse_genomes_project 7 1729292 1732859 + Gm44877 antisense antisense MGP_NODShiLtJ_T0015648.1 MGP_NODShiLtJ_G0013756.1 mouse_genomes_project 7 35064393 35064536 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015812.1 MGP_NODShiLtJ_G0013920.1 mouse_genomes_project 7 150502907 150515670 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010748.1 MGP_NODShiLtJ_G0008881.1 mouse_genomes_project 7 29566990 29567056 + Gm44408 miRNA miRNA MGP_NODShiLtJ_T0086127.1 MGP_NODShiLtJ_G0032795.1 mouse_genomes_project 7 141718083 141722254 + MGP_NODShiLtJ_P0086127 Apobr protein_coding protein_coding MGP_NODShiLtJ_T0086128.1 MGP_NODShiLtJ_G0032795.1 mouse_genomes_project 7 141718132 141721093 + MGP_NODShiLtJ_P0086128 Apobr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086129.1 MGP_NODShiLtJ_G0032795.1 mouse_genomes_project 7 141718133 141721512 + MGP_NODShiLtJ_P0086129 Apobr protein_coding protein_coding MGP_NODShiLtJ_T0086130.1 MGP_NODShiLtJ_G0032795.1 mouse_genomes_project 7 141720221 141721587 + MGP_NODShiLtJ_P0086130 Apobr protein_coding protein_coding MGP_NODShiLtJ_T0086131.1 MGP_NODShiLtJ_G0032795.1 mouse_genomes_project 7 141720815 141721467 + MGP_NODShiLtJ_P0086131 Apobr protein_coding protein_coding MGP_NODShiLtJ_T0015734.1 MGP_NODShiLtJ_G0013842.1 mouse_genomes_project 7 89157818 89158142 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083734.1 MGP_NODShiLtJ_G0032118.1 mouse_genomes_project 7 53780449 53840756 + MGP_NODShiLtJ_P0083734 Slc6a5 protein_coding protein_coding MGP_NODShiLtJ_T0083735.1 MGP_NODShiLtJ_G0032118.1 mouse_genomes_project 7 53782003 53836391 + MGP_NODShiLtJ_P0083735 Slc6a5 protein_coding protein_coding MGP_NODShiLtJ_T0085385.1 MGP_NODShiLtJ_G0032606.1 mouse_genomes_project 7 120962729 120963920 - MGP_NODShiLtJ_P0085385 5330417H12Rik protein_coding protein_coding MGP_NODShiLtJ_T0008718.1 MGP_NODShiLtJ_G0007034.1 mouse_genomes_project 7 320854 336146 - Gm44257 lincRNA lincRNA MGP_NODShiLtJ_T0081314.1 MGP_NODShiLtJ_G0031482.1 mouse_genomes_project 7 11859324 11875931 - MGP_NODShiLtJ_P0081314 Bsph2 protein_coding protein_coding MGP_NODShiLtJ_T0081315.1 MGP_NODShiLtJ_G0031482.1 mouse_genomes_project 7 11859326 11875931 - MGP_NODShiLtJ_P0081315 Bsph2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086878.1 MGP_NODShiLtJ_G0032936.1 mouse_genomes_project 7 150524673 151055777 + MGP_NODShiLtJ_P0086878 Dock1 protein_coding protein_coding MGP_NODShiLtJ_T0084722.1 MGP_NODShiLtJ_G0032343.1 mouse_genomes_project 7 109877190 109879334 - MGP_NODShiLtJ_P0084722 Omp protein_coding protein_coding MGP_NODShiLtJ_T0085359.1 MGP_NODShiLtJ_G0032586.1 mouse_genomes_project 7 120092389 120093340 - MGP_NODShiLtJ_P0085359 protein_coding protein_coding MGP_NODShiLtJ_T0085680.1 MGP_NODShiLtJ_G0032699.1 mouse_genomes_project 7 130639252 130761721 - MGP_NODShiLtJ_P0085680 Pik3c2a protein_coding protein_coding MGP_NODShiLtJ_T0085681.1 MGP_NODShiLtJ_G0032699.1 mouse_genomes_project 7 130639263 130642617 - Pik3c2a protein_coding retained_intron MGP_NODShiLtJ_T0085682.1 MGP_NODShiLtJ_G0032699.1 mouse_genomes_project 7 130641592 130670545 - MGP_NODShiLtJ_P0085682 Pik3c2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085683.1 MGP_NODShiLtJ_G0032699.1 mouse_genomes_project 7 130641714 130761721 - MGP_NODShiLtJ_P0085683 Pik3c2a protein_coding protein_coding MGP_NODShiLtJ_T0085684.1 MGP_NODShiLtJ_G0032699.1 mouse_genomes_project 7 130643893 130644634 - Pik3c2a protein_coding retained_intron MGP_NODShiLtJ_T0085685.1 MGP_NODShiLtJ_G0032699.1 mouse_genomes_project 7 130703323 130761719 - MGP_NODShiLtJ_P0085685 Pik3c2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085686.1 MGP_NODShiLtJ_G0032699.1 mouse_genomes_project 7 130704318 130761711 - Pik3c2a protein_coding retained_intron MGP_NODShiLtJ_T0102190.1 MGP_NODShiLtJ_G0040356.1 mouse_genomes_project 7 99954637 99954850 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081411.1 MGP_NODShiLtJ_G0031517.1 mouse_genomes_project 7 15327890 15330601 + MGP_NODShiLtJ_P0081411 Tmem160 protein_coding protein_coding MGP_NODShiLtJ_T0002201.1 MGP_NODShiLtJ_G0002113.1 mouse_genomes_project 7 71857224 71857635 - TEC TEC MGP_NODShiLtJ_T0085763.1 MGP_NODShiLtJ_G0032716.1 mouse_genomes_project 7 133674775 133716036 - MGP_NODShiLtJ_P0085763 Gpr139 protein_coding protein_coding MGP_NODShiLtJ_T0081836.1 MGP_NODShiLtJ_G0031652.1 mouse_genomes_project 7 24384105 24388577 + MGP_NODShiLtJ_P0081836 Lypd3 protein_coding protein_coding MGP_NODShiLtJ_T0084033.1 MGP_NODShiLtJ_G0032182.1 mouse_genomes_project 7 77391593 77403341 - MGP_NODShiLtJ_P0084033 Nr2f2 protein_coding protein_coding MGP_NODShiLtJ_T0084034.1 MGP_NODShiLtJ_G0032182.1 mouse_genomes_project 7 77397195 77410914 - MGP_NODShiLtJ_P0084034 Nr2f2 protein_coding protein_coding MGP_NODShiLtJ_T0102128.1 MGP_NODShiLtJ_G0040294.1 mouse_genomes_project 7 44669081 44673379 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081188.1 MGP_NODShiLtJ_G0031436.1 mouse_genomes_project 7 8340620 8341580 - MGP_NODShiLtJ_P0081188 Vmn1r68 protein_coding protein_coding MGP_NODShiLtJ_T0081080.1 MGP_NODShiLtJ_G0031380.1 mouse_genomes_project 7 2109526 2112234 + MGP_NODShiLtJ_P0081080 Nat14 protein_coding protein_coding MGP_NODShiLtJ_T0081902.1 MGP_NODShiLtJ_G0031668.1 mouse_genomes_project 7 24921430 24975867 - MGP_NODShiLtJ_P0081902 Pou2f2 protein_coding protein_coding MGP_NODShiLtJ_T0081903.1 MGP_NODShiLtJ_G0031668.1 mouse_genomes_project 7 24929461 24975867 - MGP_NODShiLtJ_P0081903 Pou2f2 protein_coding protein_coding MGP_NODShiLtJ_T0081904.1 MGP_NODShiLtJ_G0031668.1 mouse_genomes_project 7 24929505 24975867 - MGP_NODShiLtJ_P0081904 Pou2f2 protein_coding protein_coding MGP_NODShiLtJ_T0081905.1 MGP_NODShiLtJ_G0031668.1 mouse_genomes_project 7 24929505 24975856 - MGP_NODShiLtJ_P0081905 Pou2f2 protein_coding protein_coding MGP_NODShiLtJ_T0081906.1 MGP_NODShiLtJ_G0031668.1 mouse_genomes_project 7 24929662 24973241 - MGP_NODShiLtJ_P0081906 Pou2f2 protein_coding protein_coding MGP_NODShiLtJ_T0081907.1 MGP_NODShiLtJ_G0031668.1 mouse_genomes_project 7 24930233 24975891 - MGP_NODShiLtJ_P0081907 Pou2f2 protein_coding protein_coding MGP_NODShiLtJ_T0081908.1 MGP_NODShiLtJ_G0031668.1 mouse_genomes_project 7 24936870 24962531 - MGP_NODShiLtJ_P0081908 Pou2f2 protein_coding protein_coding MGP_NODShiLtJ_T0081909.1 MGP_NODShiLtJ_G0031668.1 mouse_genomes_project 7 24962290 25007843 - Pou2f2 protein_coding retained_intron MGP_NODShiLtJ_T0080901.1 MGP_NODShiLtJ_G0031343.1 mouse_genomes_project 7 760984 776504 - MGP_NODShiLtJ_P0080901 protein_coding protein_coding MGP_NODShiLtJ_T0084579.1 MGP_NODShiLtJ_G0032314.1 mouse_genomes_project 7 100554259 100684752 + MGP_NODShiLtJ_P0084579 Sytl2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084580.1 MGP_NODShiLtJ_G0032314.1 mouse_genomes_project 7 100611401 100685644 + MGP_NODShiLtJ_P0084580 Sytl2 protein_coding protein_coding MGP_NODShiLtJ_T0084581.1 MGP_NODShiLtJ_G0032314.1 mouse_genomes_project 7 100611401 100685644 + MGP_NODShiLtJ_P0084581 Sytl2 protein_coding protein_coding MGP_NODShiLtJ_T0084582.1 MGP_NODShiLtJ_G0032314.1 mouse_genomes_project 7 100611401 100685644 + MGP_NODShiLtJ_P0084582 Sytl2 protein_coding protein_coding MGP_NODShiLtJ_T0084583.1 MGP_NODShiLtJ_G0032314.1 mouse_genomes_project 7 100611401 100685644 + MGP_NODShiLtJ_P0084583 Sytl2 protein_coding protein_coding MGP_NODShiLtJ_T0084584.1 MGP_NODShiLtJ_G0032314.1 mouse_genomes_project 7 100644615 100685644 + Sytl2 protein_coding processed_transcript MGP_NODShiLtJ_T0084585.1 MGP_NODShiLtJ_G0032314.1 mouse_genomes_project 7 100644637 100685644 + Sytl2 protein_coding processed_transcript MGP_NODShiLtJ_T0084586.1 MGP_NODShiLtJ_G0032314.1 mouse_genomes_project 7 100672877 100685644 + Sytl2 protein_coding processed_transcript MGP_NODShiLtJ_T0002211.1 MGP_NODShiLtJ_G0002122.1 mouse_genomes_project 7 81196179 81196869 - TEC TEC MGP_NODShiLtJ_T0102100.1 MGP_NODShiLtJ_G0040267.1 mouse_genomes_project 7 15927846 15928207 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010755.1 MGP_NODShiLtJ_G0008888.1 mouse_genomes_project 7 31792456 31792516 - Mir7050 miRNA miRNA MGP_NODShiLtJ_T0086391.1 MGP_NODShiLtJ_G0032845.1 mouse_genomes_project 7 142648249 142651310 - Zfp688 protein_coding retained_intron MGP_NODShiLtJ_T0086392.1 MGP_NODShiLtJ_G0032845.1 mouse_genomes_project 7 142648249 142651322 - MGP_NODShiLtJ_P0086392 Zfp688 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086393.1 MGP_NODShiLtJ_G0032845.1 mouse_genomes_project 7 142648249 142651317 - MGP_NODShiLtJ_P0086393 Zfp688 protein_coding protein_coding MGP_NODShiLtJ_T0086394.1 MGP_NODShiLtJ_G0032845.1 mouse_genomes_project 7 142648251 142651351 - Zfp688 protein_coding retained_intron MGP_NODShiLtJ_T0086395.1 MGP_NODShiLtJ_G0032845.1 mouse_genomes_project 7 142648628 142651133 - MGP_NODShiLtJ_P0086395 Zfp688 protein_coding protein_coding MGP_NODShiLtJ_T0086396.1 MGP_NODShiLtJ_G0032845.1 mouse_genomes_project 7 142648873 142651250 - MGP_NODShiLtJ_P0086396 Zfp688 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0102055.1 MGP_NODShiLtJ_G0040222.1 mouse_genomes_project 7 1322270 1324030 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015758.1 MGP_NODShiLtJ_G0013866.1 mouse_genomes_project 7 109640013 109640404 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081801.1 MGP_NODShiLtJ_G0031643.1 mouse_genomes_project 7 24191561 24204574 + MGP_NODShiLtJ_P0081801 Plaur protein_coding protein_coding MGP_NODShiLtJ_T0081802.1 MGP_NODShiLtJ_G0031643.1 mouse_genomes_project 7 24191562 24194472 + Plaur protein_coding retained_intron MGP_NODShiLtJ_T0081803.1 MGP_NODShiLtJ_G0031643.1 mouse_genomes_project 7 24191572 24201594 + Plaur protein_coding retained_intron MGP_NODShiLtJ_T0081804.1 MGP_NODShiLtJ_G0031643.1 mouse_genomes_project 7 24191577 24204575 + Plaur protein_coding retained_intron MGP_NODShiLtJ_T0081805.1 MGP_NODShiLtJ_G0031643.1 mouse_genomes_project 7 24191577 24204332 + MGP_NODShiLtJ_P0081805 Plaur protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081806.1 MGP_NODShiLtJ_G0031643.1 mouse_genomes_project 7 24191577 24200627 + MGP_NODShiLtJ_P0081806 Plaur protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084777.1 MGP_NODShiLtJ_G0032356.1 mouse_genomes_project 7 111146286 111154228 - MGP_NODShiLtJ_P0084777 Serpinh1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082187.1 MGP_NODShiLtJ_G0031738.1 mouse_genomes_project 7 28138416 28151798 + MGP_NODShiLtJ_P0082187 Zfp626 protein_coding protein_coding MGP_NODShiLtJ_T0082188.1 MGP_NODShiLtJ_G0031738.1 mouse_genomes_project 7 28138628 28157370 + MGP_NODShiLtJ_P0082188 Zfp626 protein_coding protein_coding MGP_NODShiLtJ_T0098083.1 MGP_NODShiLtJ_G0036495.1 mouse_genomes_project 7 108485722 108485815 - Gm25712 rRNA rRNA MGP_NODShiLtJ_T0084379.1 MGP_NODShiLtJ_G0032240.1 mouse_genomes_project 7 89254467 89309688 + MGP_NODShiLtJ_P0084379 Zfp592 protein_coding protein_coding MGP_NODShiLtJ_T0084380.1 MGP_NODShiLtJ_G0032240.1 mouse_genomes_project 7 89286887 89288061 + Zfp592 protein_coding processed_transcript MGP_NODShiLtJ_T0084381.1 MGP_NODShiLtJ_G0032240.1 mouse_genomes_project 7 89302324 89302886 + Zfp592 protein_coding retained_intron MGP_NODShiLtJ_T0084382.1 MGP_NODShiLtJ_G0032240.1 mouse_genomes_project 7 89302600 89305977 + Zfp592 protein_coding retained_intron MGP_NODShiLtJ_T0084505.1 MGP_NODShiLtJ_G0032279.1 mouse_genomes_project 7 95507397 95532057 - MGP_NODShiLtJ_P0084505 Vmn2r76 protein_coding protein_coding MGP_NODShiLtJ_T0083854.1 MGP_NODShiLtJ_G0032149.1 mouse_genomes_project 7 70278403 70335089 - MGP_NODShiLtJ_P0083854 Klf13 protein_coding protein_coding MGP_NODShiLtJ_T0083855.1 MGP_NODShiLtJ_G0032149.1 mouse_genomes_project 7 70283421 70332475 - MGP_NODShiLtJ_P0083855 Klf13 protein_coding protein_coding MGP_NODShiLtJ_T0083856.1 MGP_NODShiLtJ_G0032149.1 mouse_genomes_project 7 70283438 70320641 - MGP_NODShiLtJ_P0083856 Klf13 protein_coding protein_coding MGP_NODShiLtJ_T0083858.1 MGP_NODShiLtJ_G0032149.1 mouse_genomes_project 7 70331572 70332506 - Klf13 protein_coding retained_intron MGP_NODShiLtJ_T0085872.1 MGP_NODShiLtJ_G0032749.1 mouse_genomes_project 7 135845011 135940997 + MGP_NODShiLtJ_P0085872 Otoa protein_coding protein_coding MGP_NODShiLtJ_T0085873.1 MGP_NODShiLtJ_G0032749.1 mouse_genomes_project 7 135845097 135865978 + MGP_NODShiLtJ_P0085873 Otoa protein_coding protein_coding MGP_NODShiLtJ_T0085874.1 MGP_NODShiLtJ_G0032749.1 mouse_genomes_project 7 135845113 135854411 + MGP_NODShiLtJ_P0085874 Otoa protein_coding protein_coding MGP_NODShiLtJ_T0085875.1 MGP_NODShiLtJ_G0032749.1 mouse_genomes_project 7 135845113 135854429 + MGP_NODShiLtJ_P0085875 Otoa protein_coding protein_coding MGP_NODShiLtJ_T0085876.1 MGP_NODShiLtJ_G0032749.1 mouse_genomes_project 7 135881628 135937465 + Otoa protein_coding retained_intron MGP_NODShiLtJ_T0085877.1 MGP_NODShiLtJ_G0032749.1 mouse_genomes_project 7 135881633 135940991 + Otoa protein_coding processed_transcript MGP_NODShiLtJ_T0086490.1 MGP_NODShiLtJ_G0032861.1 mouse_genomes_project 7 143033650 143057420 + MGP_NODShiLtJ_P0086490 Setd1a protein_coding protein_coding MGP_NODShiLtJ_T0086491.1 MGP_NODShiLtJ_G0032861.1 mouse_genomes_project 7 143034129 143041045 + MGP_NODShiLtJ_P0086491 Setd1a protein_coding protein_coding MGP_NODShiLtJ_T0086492.1 MGP_NODShiLtJ_G0032861.1 mouse_genomes_project 7 143034369 143040672 + MGP_NODShiLtJ_P0086492 Setd1a protein_coding protein_coding MGP_NODShiLtJ_T0086493.1 MGP_NODShiLtJ_G0032861.1 mouse_genomes_project 7 143034369 143057413 + MGP_NODShiLtJ_P0086493 Setd1a protein_coding protein_coding MGP_NODShiLtJ_T0086494.1 MGP_NODShiLtJ_G0032861.1 mouse_genomes_project 7 143034675 143035546 + MGP_NODShiLtJ_P0086494 Setd1a protein_coding protein_coding MGP_NODShiLtJ_T0086495.1 MGP_NODShiLtJ_G0032861.1 mouse_genomes_project 7 143035557 143038884 + Setd1a protein_coding processed_transcript MGP_NODShiLtJ_T0080933.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1165344 1170495 + MGP_NODShiLtJ_P0080933 Leng8 protein_coding protein_coding MGP_NODShiLtJ_T0080934.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1165354 1176489 + MGP_NODShiLtJ_P0080934 Leng8 protein_coding protein_coding MGP_NODShiLtJ_T0080935.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1165354 1168311 + MGP_NODShiLtJ_P0080935 Leng8 protein_coding protein_coding MGP_NODShiLtJ_T0080936.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1165365 1168764 + MGP_NODShiLtJ_P0080936 Leng8 protein_coding protein_coding MGP_NODShiLtJ_T0080937.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1165371 1176484 + MGP_NODShiLtJ_P0080937 Leng8 protein_coding protein_coding MGP_NODShiLtJ_T0080938.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1165376 1170420 + MGP_NODShiLtJ_P0080938 Leng8 protein_coding protein_coding MGP_NODShiLtJ_T0080939.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1165389 1176485 + Leng8 protein_coding retained_intron MGP_NODShiLtJ_T0080940.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1165873 1169405 + MGP_NODShiLtJ_P0080940 Leng8 protein_coding protein_coding MGP_NODShiLtJ_T0080941.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1170470 1171241 + Leng8 protein_coding retained_intron MGP_NODShiLtJ_T0080942.1 MGP_NODShiLtJ_G0031349.1 mouse_genomes_project 7 1173031 1173954 + Leng8 protein_coding retained_intron MGP_NODShiLtJ_T0082824.1 MGP_NODShiLtJ_G0031883.1 mouse_genomes_project 7 34675234 34676418 + MGP_NODShiLtJ_P0082824 Scgb1b24 protein_coding protein_coding MGP_NODShiLtJ_T0085878.1 MGP_NODShiLtJ_G0032750.1 mouse_genomes_project 7 136182441 136188654 + MGP_NODShiLtJ_P0085878 Hs3st2 protein_coding protein_coding MGP_NODShiLtJ_T0085879.1 MGP_NODShiLtJ_G0032750.1 mouse_genomes_project 7 136182872 136292182 + MGP_NODShiLtJ_P0085879 Hs3st2 protein_coding protein_coding MGP_NODShiLtJ_T0085817.1 MGP_NODShiLtJ_G0032731.1 mouse_genomes_project 7 134711092 134733396 + MGP_NODShiLtJ_P0085817 Tmem159 protein_coding protein_coding MGP_NODShiLtJ_T0085818.1 MGP_NODShiLtJ_G0032731.1 mouse_genomes_project 7 134711111 134713956 + Tmem159 protein_coding retained_intron MGP_NODShiLtJ_T0085819.1 MGP_NODShiLtJ_G0032731.1 mouse_genomes_project 7 134711624 134733402 + MGP_NODShiLtJ_P0085819 Tmem159 protein_coding protein_coding MGP_NODShiLtJ_T0015644.1 MGP_NODShiLtJ_G0013752.1 mouse_genomes_project 7 34800771 34801530 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002164.1 MGP_NODShiLtJ_G0002076.1 mouse_genomes_project 7 38069879 38073864 + TEC TEC MGP_NODShiLtJ_T0015680.1 MGP_NODShiLtJ_G0013788.1 mouse_genomes_project 7 45933983 45934221 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008757.1 MGP_NODShiLtJ_G0007069.1 mouse_genomes_project 7 36298552 36303953 + Gm45097 lincRNA lincRNA MGP_NODShiLtJ_T0083364.1 MGP_NODShiLtJ_G0032016.1 mouse_genomes_project 7 47868708 47879403 - MGP_NODShiLtJ_P0083364 Fcgrt protein_coding protein_coding MGP_NODShiLtJ_T0100779.1 MGP_NODShiLtJ_G0039173.1 mouse_genomes_project 7 133844355 133844481 - Gm23321 snoRNA snoRNA MGP_NODShiLtJ_T0008926.1 MGP_NODShiLtJ_G0007184.1 mouse_genomes_project 7 139470628 139488928 - Gm15339 lincRNA lincRNA MGP_NODShiLtJ_T0082649.1 MGP_NODShiLtJ_G0031850.1 mouse_genomes_project 7 31308286 31318992 - MGP_NODShiLtJ_P0082649 Rbm42 protein_coding protein_coding MGP_NODShiLtJ_T0082650.1 MGP_NODShiLtJ_G0031850.1 mouse_genomes_project 7 31308291 31318819 - MGP_NODShiLtJ_P0082650 Rbm42 protein_coding protein_coding MGP_NODShiLtJ_T0082651.1 MGP_NODShiLtJ_G0031850.1 mouse_genomes_project 7 31312805 31314692 - Rbm42 protein_coding retained_intron MGP_NODShiLtJ_T0085123.1 MGP_NODShiLtJ_G0032464.1 mouse_genomes_project 7 115664963 115666259 + MGP_NODShiLtJ_P0085123 protein_coding protein_coding MGP_NODShiLtJ_T0018269.1 MGP_NODShiLtJ_G0015565.1 mouse_genomes_project 7 157688379 157695621 - B230206H07Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018270.1 MGP_NODShiLtJ_G0015565.1 mouse_genomes_project 7 157688416 157695649 - B230206H07Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0010785.1 MGP_NODShiLtJ_G0008918.1 mouse_genomes_project 7 68080533 68080604 - Mir344g miRNA miRNA MGP_NODShiLtJ_T0087524.1 MGP_NODShiLtJ_G0033095.1 mouse_genomes_project 7 161188683 161194721 - MGP_NODShiLtJ_P0087524 Fadd protein_coding protein_coding MGP_NODShiLtJ_T0085107.1 MGP_NODShiLtJ_G0032449.1 mouse_genomes_project 7 115229802 115230770 + MGP_NODShiLtJ_P0085107 protein_coding protein_coding MGP_NODShiLtJ_T0081185.1 MGP_NODShiLtJ_G0031433.1 mouse_genomes_project 7 7985250 7986753 - MGP_NODShiLtJ_P0081185 Vmn1r66 protein_coding protein_coding MGP_NODShiLtJ_T0008850.1 MGP_NODShiLtJ_G0007140.1 mouse_genomes_project 7 83319565 83322574 - AU020206 lincRNA lincRNA MGP_NODShiLtJ_T0008851.1 MGP_NODShiLtJ_G0007140.1 mouse_genomes_project 7 83320289 83334464 - AU020206 lincRNA lincRNA MGP_NODShiLtJ_T0083429.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48179665 48200963 - MGP_NODShiLtJ_P0083429 Snrnp70 protein_coding protein_coding MGP_NODShiLtJ_T0083430.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48179671 48187098 - MGP_NODShiLtJ_P0083430 Snrnp70 protein_coding protein_coding MGP_NODShiLtJ_T0083431.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48179674 48200879 - Snrnp70 protein_coding retained_intron MGP_NODShiLtJ_T0083432.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48179675 48200913 - Snrnp70 protein_coding retained_intron MGP_NODShiLtJ_T0083433.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48180358 48197539 - MGP_NODShiLtJ_P0083433 Snrnp70 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083434.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48184565 48187487 - Snrnp70 protein_coding retained_intron MGP_NODShiLtJ_T0083435.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48186752 48200017 - Snrnp70 protein_coding retained_intron MGP_NODShiLtJ_T0083436.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48186920 48193187 - Snrnp70 protein_coding retained_intron MGP_NODShiLtJ_T0083437.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48186970 48200394 - MGP_NODShiLtJ_P0083437 Snrnp70 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083438.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48186985 48200416 - MGP_NODShiLtJ_P0083438 Snrnp70 protein_coding protein_coding MGP_NODShiLtJ_T0083439.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48192365 48199937 - Snrnp70 protein_coding retained_intron MGP_NODShiLtJ_T0083440.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48192806 48200930 - MGP_NODShiLtJ_P0083440 Snrnp70 protein_coding protein_coding MGP_NODShiLtJ_T0083441.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48192850 48197996 - Snrnp70 protein_coding processed_transcript MGP_NODShiLtJ_T0083442.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48196404 48198102 - Snrnp70 protein_coding retained_intron MGP_NODShiLtJ_T0083443.1 MGP_NODShiLtJ_G0032034.1 mouse_genomes_project 7 48197041 48200778 - Snrnp70 protein_coding retained_intron MGP_NODShiLtJ_T0082572.1 MGP_NODShiLtJ_G0031837.1 mouse_genomes_project 7 31144291 31168746 + MGP_NODShiLtJ_P0082572 Prodh2 protein_coding protein_coding MGP_NODShiLtJ_T0082573.1 MGP_NODShiLtJ_G0031837.1 mouse_genomes_project 7 31144327 31164102 + Prodh2 protein_coding processed_transcript MGP_NODShiLtJ_T0082574.1 MGP_NODShiLtJ_G0031837.1 mouse_genomes_project 7 31144327 31161893 + MGP_NODShiLtJ_P0082574 Prodh2 protein_coding protein_coding MGP_NODShiLtJ_T0082575.1 MGP_NODShiLtJ_G0031837.1 mouse_genomes_project 7 31144328 31144957 + Prodh2 protein_coding retained_intron MGP_NODShiLtJ_T0082576.1 MGP_NODShiLtJ_G0031837.1 mouse_genomes_project 7 31144328 31162121 + MGP_NODShiLtJ_P0082576 Prodh2 protein_coding protein_coding MGP_NODShiLtJ_T0082577.1 MGP_NODShiLtJ_G0031837.1 mouse_genomes_project 7 31144350 31161982 + MGP_NODShiLtJ_P0082577 Prodh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082578.1 MGP_NODShiLtJ_G0031837.1 mouse_genomes_project 7 31144449 31162189 + MGP_NODShiLtJ_P0082578 Prodh2 protein_coding protein_coding MGP_NODShiLtJ_T0082579.1 MGP_NODShiLtJ_G0031837.1 mouse_genomes_project 7 31162220 31168382 + MGP_NODShiLtJ_P0082579 Prodh2 protein_coding protein_coding MGP_NODShiLtJ_T0083745.1 MGP_NODShiLtJ_G0032123.1 mouse_genomes_project 7 55960069 55961760 - MGP_NODShiLtJ_P0083745 Fancf protein_coding protein_coding MGP_NODShiLtJ_T0002269.1 MGP_NODShiLtJ_G0002180.1 mouse_genomes_project 7 144101669 144102665 - TEC TEC MGP_NODShiLtJ_T0081749.1 MGP_NODShiLtJ_G0031630.1 mouse_genomes_project 7 23831007 23833748 + Zfp235 protein_coding processed_transcript MGP_NODShiLtJ_T0081750.1 MGP_NODShiLtJ_G0031630.1 mouse_genomes_project 7 23831029 23839942 + MGP_NODShiLtJ_P0081750 Zfp235 protein_coding protein_coding MGP_NODShiLtJ_T0081751.1 MGP_NODShiLtJ_G0031630.1 mouse_genomes_project 7 23831040 23832322 + Zfp235 protein_coding retained_intron MGP_NODShiLtJ_T0081752.1 MGP_NODShiLtJ_G0031630.1 mouse_genomes_project 7 23831061 23833752 + Zfp235 protein_coding processed_transcript MGP_NODShiLtJ_T0081753.1 MGP_NODShiLtJ_G0031630.1 mouse_genomes_project 7 23831075 23842260 + MGP_NODShiLtJ_P0081753 Zfp235 protein_coding protein_coding MGP_NODShiLtJ_T0081408.1 MGP_NODShiLtJ_G0031515.1 mouse_genomes_project 7 15195494 15260829 - MGP_NODShiLtJ_P0081408 Sae1 protein_coding protein_coding MGP_NODShiLtJ_T0082646.1 MGP_NODShiLtJ_G0031847.1 mouse_genomes_project 7 31265076 31274727 - MGP_NODShiLtJ_P0082646 Upk1a protein_coding protein_coding MGP_NODShiLtJ_T0084524.1 MGP_NODShiLtJ_G0032296.1 mouse_genomes_project 7 96585817 96703705 + MGP_NODShiLtJ_P0084524 protein_coding protein_coding MGP_NODShiLtJ_T0083201.1 MGP_NODShiLtJ_G0031979.1 mouse_genomes_project 7 47164995 47167364 + MGP_NODShiLtJ_P0083201 Aspdh protein_coding protein_coding MGP_NODShiLtJ_T0083202.1 MGP_NODShiLtJ_G0031979.1 mouse_genomes_project 7 47165013 47166940 + MGP_NODShiLtJ_P0083202 Aspdh protein_coding protein_coding MGP_NODShiLtJ_T0083203.1 MGP_NODShiLtJ_G0031979.1 mouse_genomes_project 7 47165021 47166827 + MGP_NODShiLtJ_P0083203 Aspdh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083204.1 MGP_NODShiLtJ_G0031979.1 mouse_genomes_project 7 47165030 47166818 + Aspdh protein_coding retained_intron MGP_NODShiLtJ_T0083205.1 MGP_NODShiLtJ_G0031979.1 mouse_genomes_project 7 47165048 47166922 + Aspdh protein_coding processed_transcript MGP_NODShiLtJ_T0083206.1 MGP_NODShiLtJ_G0031979.1 mouse_genomes_project 7 47166074 47167301 + MGP_NODShiLtJ_P0083206 Aspdh protein_coding protein_coding MGP_NODShiLtJ_T0081208.1 MGP_NODShiLtJ_G0031451.1 mouse_genomes_project 7 10552020 10552977 - MGP_NODShiLtJ_P0081208 Vmn1r84 protein_coding protein_coding MGP_NODShiLtJ_T0083681.1 MGP_NODShiLtJ_G0032100.1 mouse_genomes_project 7 50237581 50256008 - MGP_NODShiLtJ_P0083681 Mrgpra9 protein_coding protein_coding MGP_NODShiLtJ_T0083682.1 MGP_NODShiLtJ_G0032100.1 mouse_genomes_project 7 50237595 50255988 - MGP_NODShiLtJ_P0083682 Mrgpra9 protein_coding protein_coding MGP_NODShiLtJ_T0099479.1 MGP_NODShiLtJ_G0037873.1 mouse_genomes_project 7 28511572 28511678 + Gm24356 snRNA snRNA MGP_NODShiLtJ_T0084073.1 MGP_NODShiLtJ_G0032190.1 mouse_genomes_project 7 82616098 82827393 - MGP_NODShiLtJ_P0084073 Sv2b protein_coding protein_coding MGP_NODShiLtJ_T0084074.1 MGP_NODShiLtJ_G0032190.1 mouse_genomes_project 7 82616101 82826511 - MGP_NODShiLtJ_P0084074 Sv2b protein_coding protein_coding MGP_NODShiLtJ_T0084075.1 MGP_NODShiLtJ_G0032190.1 mouse_genomes_project 7 82617538 82730913 - MGP_NODShiLtJ_P0084075 Sv2b protein_coding protein_coding MGP_NODShiLtJ_T0084076.1 MGP_NODShiLtJ_G0032190.1 mouse_genomes_project 7 82621147 82657855 - MGP_NODShiLtJ_P0084076 Sv2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084077.1 MGP_NODShiLtJ_G0032190.1 mouse_genomes_project 7 82669283 82673946 - Sv2b protein_coding processed_transcript MGP_NODShiLtJ_T0084078.1 MGP_NODShiLtJ_G0032190.1 mouse_genomes_project 7 82669283 82673935 - Sv2b protein_coding processed_transcript MGP_NODShiLtJ_T0084079.1 MGP_NODShiLtJ_G0032190.1 mouse_genomes_project 7 82713825 82826441 - Sv2b protein_coding retained_intron MGP_NODShiLtJ_T0086723.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146379469 146428647 + MGP_NODShiLtJ_P0086723 Plekha1 protein_coding protein_coding MGP_NODShiLtJ_T0086724.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146379598 146410161 + Plekha1 protein_coding retained_intron MGP_NODShiLtJ_T0086725.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146379600 146392709 + Plekha1 protein_coding retained_intron MGP_NODShiLtJ_T0086726.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146379611 146427403 + MGP_NODShiLtJ_P0086726 Plekha1 protein_coding protein_coding MGP_NODShiLtJ_T0086727.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146379616 146425158 + MGP_NODShiLtJ_P0086727 Plekha1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086728.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146379623 146428637 + MGP_NODShiLtJ_P0086728 Plekha1 protein_coding protein_coding MGP_NODShiLtJ_T0086729.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146396671 146399840 + Plekha1 protein_coding retained_intron MGP_NODShiLtJ_T0086730.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146412406 146420759 + Plekha1 protein_coding retained_intron MGP_NODShiLtJ_T0086731.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146415930 146425013 + Plekha1 protein_coding processed_transcript MGP_NODShiLtJ_T0086732.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146417577 146424237 + Plekha1 protein_coding retained_intron MGP_NODShiLtJ_T0086733.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146420236 146426498 + MGP_NODShiLtJ_P0086733 Plekha1 protein_coding protein_coding MGP_NODShiLtJ_T0086734.1 MGP_NODShiLtJ_G0032902.1 mouse_genomes_project 7 146420636 146426236 + Plekha1 protein_coding retained_intron MGP_NODShiLtJ_T0085000.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981786 113990201 - MGP_NODShiLtJ_P0085000 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0085001.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981791 113989763 - MGP_NODShiLtJ_P0085001 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0085002.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981791 113990214 - MGP_NODShiLtJ_P0085002 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0085003.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981792 114005202 - MGP_NODShiLtJ_P0085003 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0085004.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981792 114005264 - MGP_NODShiLtJ_P0085004 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0085005.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981792 113990188 - MGP_NODShiLtJ_P0085005 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0085006.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981796 113990172 - MGP_NODShiLtJ_P0085006 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0085007.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981803 114005291 - Lrrc51 protein_coding processed_transcript MGP_NODShiLtJ_T0085008.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981960 114005198 - MGP_NODShiLtJ_P0085008 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0085009.1 MGP_NODShiLtJ_G0032403.1 mouse_genomes_project 7 113981976 114005226 - MGP_NODShiLtJ_P0085009 Lrrc51 protein_coding protein_coding MGP_NODShiLtJ_T0083483.1 MGP_NODShiLtJ_G0032046.1 mouse_genomes_project 7 48357068 48384558 + MGP_NODShiLtJ_P0083483 Plekha4 protein_coding protein_coding MGP_NODShiLtJ_T0083484.1 MGP_NODShiLtJ_G0032046.1 mouse_genomes_project 7 48357068 48389315 + MGP_NODShiLtJ_P0083484 Plekha4 protein_coding protein_coding MGP_NODShiLtJ_T0083485.1 MGP_NODShiLtJ_G0032046.1 mouse_genomes_project 7 48360851 48389315 + MGP_NODShiLtJ_P0083485 Plekha4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083486.1 MGP_NODShiLtJ_G0032046.1 mouse_genomes_project 7 48360898 48363199 + MGP_NODShiLtJ_P0083486 Plekha4 protein_coding protein_coding MGP_NODShiLtJ_T0083487.1 MGP_NODShiLtJ_G0032046.1 mouse_genomes_project 7 48360963 48389315 + MGP_NODShiLtJ_P0083487 Plekha4 protein_coding protein_coding MGP_NODShiLtJ_T0083488.1 MGP_NODShiLtJ_G0032046.1 mouse_genomes_project 7 48361430 48389118 + MGP_NODShiLtJ_P0083488 Plekha4 protein_coding protein_coding MGP_NODShiLtJ_T0083489.1 MGP_NODShiLtJ_G0032046.1 mouse_genomes_project 7 48384823 48389315 + Plekha4 protein_coding processed_transcript MGP_NODShiLtJ_T0083490.1 MGP_NODShiLtJ_G0032046.1 mouse_genomes_project 7 48387775 48389315 + Plekha4 protein_coding retained_intron MGP_NODShiLtJ_T0008839.1 MGP_NODShiLtJ_G0007131.1 mouse_genomes_project 7 80994007 80994742 - Gm44738 lincRNA lincRNA MGP_NODShiLtJ_T0085466.1 MGP_NODShiLtJ_G0032657.1 mouse_genomes_project 7 123458378 123531675 - MGP_NODShiLtJ_P0085466 Scube2 protein_coding protein_coding MGP_NODShiLtJ_T0085467.1 MGP_NODShiLtJ_G0032657.1 mouse_genomes_project 7 123458392 123531768 - MGP_NODShiLtJ_P0085467 Scube2 protein_coding protein_coding MGP_NODShiLtJ_T0085468.1 MGP_NODShiLtJ_G0032657.1 mouse_genomes_project 7 123458535 123531732 - MGP_NODShiLtJ_P0085468 Scube2 protein_coding protein_coding MGP_NODShiLtJ_T0085469.1 MGP_NODShiLtJ_G0032657.1 mouse_genomes_project 7 123458791 123503507 - Scube2 protein_coding processed_transcript MGP_NODShiLtJ_T0085470.1 MGP_NODShiLtJ_G0032657.1 mouse_genomes_project 7 123460347 123470034 - Scube2 protein_coding processed_transcript MGP_NODShiLtJ_T0085883.1 MGP_NODShiLtJ_G0032753.1 mouse_genomes_project 7 136674291 136733014 + MGP_NODShiLtJ_P0085883 Scnn1b protein_coding protein_coding MGP_NODShiLtJ_T0085884.1 MGP_NODShiLtJ_G0032753.1 mouse_genomes_project 7 136674330 136733016 + MGP_NODShiLtJ_P0085884 Scnn1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085887.1 MGP_NODShiLtJ_G0032753.1 mouse_genomes_project 7 136713098 136726482 + MGP_NODShiLtJ_P0085887 Scnn1b protein_coding protein_coding MGP_NODShiLtJ_T0010805.1 MGP_NODShiLtJ_G0008938.1 mouse_genomes_project 7 113491919 113491987 + Mir139 miRNA miRNA MGP_NODShiLtJ_T0010723.1 MGP_NODShiLtJ_G0008856.1 mouse_genomes_project 7 133857 133941 + Mir294 miRNA miRNA MGP_NODShiLtJ_T0082037.1 MGP_NODShiLtJ_G0031700.1 mouse_genomes_project 7 26586756 26634658 + MGP_NODShiLtJ_P0082037 Nlrp9a protein_coding protein_coding MGP_NODShiLtJ_T0082038.1 MGP_NODShiLtJ_G0031700.1 mouse_genomes_project 7 26586798 26634654 + MGP_NODShiLtJ_P0082038 Nlrp9a protein_coding protein_coding MGP_NODShiLtJ_T0082039.1 MGP_NODShiLtJ_G0031700.1 mouse_genomes_project 7 26586799 26626977 + MGP_NODShiLtJ_P0082039 Nlrp9a protein_coding protein_coding MGP_NODShiLtJ_T0082040.1 MGP_NODShiLtJ_G0031700.1 mouse_genomes_project 7 26586804 26623931 + Nlrp9a protein_coding processed_transcript MGP_NODShiLtJ_T0082041.1 MGP_NODShiLtJ_G0031700.1 mouse_genomes_project 7 26609694 26634497 + MGP_NODShiLtJ_P0082041 Nlrp9a protein_coding protein_coding MGP_NODShiLtJ_T0082042.1 MGP_NODShiLtJ_G0031700.1 mouse_genomes_project 7 26609694 26636237 + MGP_NODShiLtJ_P0082042 Nlrp9a protein_coding protein_coding MGP_NODShiLtJ_T0083817.1 MGP_NODShiLtJ_G0032135.1 mouse_genomes_project 7 61742111 62527517 - MGP_NODShiLtJ_P0083817 Gabrg3 protein_coding protein_coding MGP_NODShiLtJ_T0083818.1 MGP_NODShiLtJ_G0032135.1 mouse_genomes_project 7 62296861 62527200 - MGP_NODShiLtJ_P0083818 Gabrg3 protein_coding protein_coding MGP_NODShiLtJ_T0083819.1 MGP_NODShiLtJ_G0032135.1 mouse_genomes_project 7 62457641 62527517 - Gabrg3 protein_coding retained_intron MGP_NODShiLtJ_T0010758.1 MGP_NODShiLtJ_G0008891.1 mouse_genomes_project 7 47169952 47170017 + Mir7052 miRNA miRNA MGP_NODShiLtJ_T0084545.1 MGP_NODShiLtJ_G0032302.1 mouse_genomes_project 7 98562334 98633913 + MGP_NODShiLtJ_P0084545 Rab38 protein_coding protein_coding MGP_NODShiLtJ_T0015700.1 MGP_NODShiLtJ_G0013808.1 mouse_genomes_project 7 61174158 61175050 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081124.1 MGP_NODShiLtJ_G0031405.1 mouse_genomes_project 7 3471700 3517856 - MGP_NODShiLtJ_P0081124 Zfp787 protein_coding protein_coding MGP_NODShiLtJ_T0015781.1 MGP_NODShiLtJ_G0013889.1 mouse_genomes_project 7 130817730 130818018 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010731.1 MGP_NODShiLtJ_G0008864.1 mouse_genomes_project 7 4800166 4800222 + Mir5620 miRNA miRNA MGP_NODShiLtJ_T0086487.1 MGP_NODShiLtJ_G0032860.1 mouse_genomes_project 7 143026763 143032099 + MGP_NODShiLtJ_P0086487 Orai3 protein_coding protein_coding MGP_NODShiLtJ_T0086488.1 MGP_NODShiLtJ_G0032860.1 mouse_genomes_project 7 143026763 143032099 + MGP_NODShiLtJ_P0086488 Orai3 protein_coding protein_coding MGP_NODShiLtJ_T0086489.1 MGP_NODShiLtJ_G0032860.1 mouse_genomes_project 7 143026763 143031641 + MGP_NODShiLtJ_P0086489 Orai3 protein_coding protein_coding MGP_NODShiLtJ_T0085087.1 MGP_NODShiLtJ_G0032431.1 mouse_genomes_project 7 114834245 114843976 - MGP_NODShiLtJ_P0085087 Trim68 protein_coding protein_coding MGP_NODShiLtJ_T0011589.1 MGP_NODShiLtJ_G0009722.1 mouse_genomes_project 7 159046067 159046137 + Gm27786 misc_RNA misc_RNA MGP_NODShiLtJ_T0086228.1 MGP_NODShiLtJ_G0032810.1 mouse_genomes_project 7 141992750 141993779 - MGP_NODShiLtJ_P0086228 4930451I11Rik protein_coding protein_coding MGP_NODShiLtJ_T0086229.1 MGP_NODShiLtJ_G0032810.1 mouse_genomes_project 7 141992751 141993922 - 4930451I11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0086230.1 MGP_NODShiLtJ_G0032810.1 mouse_genomes_project 7 141992759 141993755 - MGP_NODShiLtJ_P0086230 4930451I11Rik protein_coding protein_coding MGP_NODShiLtJ_T0005169.1 MGP_NODShiLtJ_G0004392.1 mouse_genomes_project 7 80654854 80716463 - A730056A06Rik antisense antisense MGP_NODShiLtJ_T0005170.1 MGP_NODShiLtJ_G0004392.1 mouse_genomes_project 7 80657096 80716472 - A730056A06Rik antisense antisense MGP_NODShiLtJ_T0083124.1 MGP_NODShiLtJ_G0031955.1 mouse_genomes_project 7 46250825 46265414 + MGP_NODShiLtJ_P0083124 Ceacam18 protein_coding protein_coding MGP_NODShiLtJ_T0083667.1 MGP_NODShiLtJ_G0032093.1 mouse_genomes_project 7 49848770 49881567 - MGP_NODShiLtJ_P0083667 Tsg101 protein_coding protein_coding MGP_NODShiLtJ_T0083668.1 MGP_NODShiLtJ_G0032093.1 mouse_genomes_project 7 49848848 49852270 - Tsg101 protein_coding processed_transcript MGP_NODShiLtJ_T0083669.1 MGP_NODShiLtJ_G0032093.1 mouse_genomes_project 7 49862195 49876009 - MGP_NODShiLtJ_P0083669 Tsg101 protein_coding protein_coding MGP_NODShiLtJ_T0083670.1 MGP_NODShiLtJ_G0032093.1 mouse_genomes_project 7 49867527 49869984 - Tsg101 protein_coding retained_intron MGP_NODShiLtJ_T0083671.1 MGP_NODShiLtJ_G0032093.1 mouse_genomes_project 7 49867989 49881535 - MGP_NODShiLtJ_P0083671 Tsg101 protein_coding protein_coding MGP_NODShiLtJ_T0005244.1 MGP_NODShiLtJ_G0004444.1 mouse_genomes_project 7 144128813 144129911 - Gm44672 antisense antisense MGP_NODShiLtJ_T0002157.1 MGP_NODShiLtJ_G0002069.1 mouse_genomes_project 7 35378201 35379345 - TEC TEC MGP_NODShiLtJ_T0005176.1 MGP_NODShiLtJ_G0004397.1 mouse_genomes_project 7 87825029 87827100 + 9330171B17Rik antisense antisense MGP_NODShiLtJ_T0005177.1 MGP_NODShiLtJ_G0004397.1 mouse_genomes_project 7 87825117 87827102 + 9330171B17Rik antisense antisense MGP_NODShiLtJ_T0084468.1 MGP_NODShiLtJ_G0032265.1 mouse_genomes_project 7 92130812 92141156 + MGP_NODShiLtJ_P0084468 Stard5 protein_coding protein_coding MGP_NODShiLtJ_T0084469.1 MGP_NODShiLtJ_G0032265.1 mouse_genomes_project 7 92130853 92132315 + Stard5 protein_coding retained_intron MGP_NODShiLtJ_T0084470.1 MGP_NODShiLtJ_G0032265.1 mouse_genomes_project 7 92130853 92151979 + MGP_NODShiLtJ_P0084470 Stard5 protein_coding protein_coding MGP_NODShiLtJ_T0084471.1 MGP_NODShiLtJ_G0032265.1 mouse_genomes_project 7 92130869 92136919 + Stard5 protein_coding retained_intron MGP_NODShiLtJ_T0084472.1 MGP_NODShiLtJ_G0032265.1 mouse_genomes_project 7 92131396 92132199 + Stard5 protein_coding processed_transcript MGP_NODShiLtJ_T0081519.1 MGP_NODShiLtJ_G0031555.1 mouse_genomes_project 7 18209447 18209960 - Ccdc61 protein_coding retained_intron MGP_NODShiLtJ_T0081520.1 MGP_NODShiLtJ_G0031555.1 mouse_genomes_project 7 18209447 18228813 - MGP_NODShiLtJ_P0081520 Ccdc61 protein_coding protein_coding MGP_NODShiLtJ_T0081521.1 MGP_NODShiLtJ_G0031555.1 mouse_genomes_project 7 18209448 18228796 - MGP_NODShiLtJ_P0081521 Ccdc61 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081522.1 MGP_NODShiLtJ_G0031555.1 mouse_genomes_project 7 18209448 18211111 - MGP_NODShiLtJ_P0081522 Ccdc61 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081523.1 MGP_NODShiLtJ_G0031555.1 mouse_genomes_project 7 18209569 18212523 - MGP_NODShiLtJ_P0081523 Ccdc61 protein_coding protein_coding MGP_NODShiLtJ_T0081524.1 MGP_NODShiLtJ_G0031555.1 mouse_genomes_project 7 18210211 18210917 - Ccdc61 protein_coding retained_intron MGP_NODShiLtJ_T0081525.1 MGP_NODShiLtJ_G0031555.1 mouse_genomes_project 7 18218068 18228796 - MGP_NODShiLtJ_P0081525 Ccdc61 protein_coding protein_coding MGP_NODShiLtJ_T0081526.1 MGP_NODShiLtJ_G0031555.1 mouse_genomes_project 7 18219501 18228787 - MGP_NODShiLtJ_P0081526 Ccdc61 protein_coding protein_coding MGP_NODShiLtJ_T0083811.1 MGP_NODShiLtJ_G0032134.1 mouse_genomes_project 7 61197551 61540868 + MGP_NODShiLtJ_P0083811 Oca2 protein_coding protein_coding MGP_NODShiLtJ_T0083812.1 MGP_NODShiLtJ_G0032134.1 mouse_genomes_project 7 61197552 61213795 + MGP_NODShiLtJ_P0083812 Oca2 protein_coding protein_coding MGP_NODShiLtJ_T0083813.1 MGP_NODShiLtJ_G0032134.1 mouse_genomes_project 7 61197568 61540615 + MGP_NODShiLtJ_P0083813 Oca2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083814.1 MGP_NODShiLtJ_G0032134.1 mouse_genomes_project 7 61197572 61240047 + MGP_NODShiLtJ_P0083814 Oca2 protein_coding protein_coding MGP_NODShiLtJ_T0083815.1 MGP_NODShiLtJ_G0032134.1 mouse_genomes_project 7 61197599 61540863 + MGP_NODShiLtJ_P0083815 Oca2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083816.1 MGP_NODShiLtJ_G0032134.1 mouse_genomes_project 7 61269614 61288228 + Oca2 protein_coding processed_transcript MGP_NODShiLtJ_T0010730.1 MGP_NODShiLtJ_G0008863.1 mouse_genomes_project 7 4244334 4244418 + Mir3099 miRNA miRNA MGP_NODShiLtJ_T0086155.1 MGP_NODShiLtJ_G0032801.1 mouse_genomes_project 7 141845052 141846339 + Bola2 protein_coding retained_intron MGP_NODShiLtJ_T0086156.1 MGP_NODShiLtJ_G0032801.1 mouse_genomes_project 7 141845087 141846710 + MGP_NODShiLtJ_P0086156 Bola2 protein_coding protein_coding MGP_NODShiLtJ_T0086157.1 MGP_NODShiLtJ_G0032801.1 mouse_genomes_project 7 141845617 141846345 + Bola2 protein_coding processed_transcript MGP_NODShiLtJ_T0086158.1 MGP_NODShiLtJ_G0032801.1 mouse_genomes_project 7 141845624 141846349 + MGP_NODShiLtJ_P0086158 Bola2 protein_coding protein_coding MGP_NODShiLtJ_T0086159.1 MGP_NODShiLtJ_G0032801.1 mouse_genomes_project 7 141845654 141849438 + Bola2 protein_coding retained_intron MGP_NODShiLtJ_T0081507.1 MGP_NODShiLtJ_G0031550.1 mouse_genomes_project 7 17968897 17983427 + MGP_NODShiLtJ_P0081507 Psg22 protein_coding protein_coding MGP_NODShiLtJ_T0085168.1 MGP_NODShiLtJ_G0032507.1 mouse_genomes_project 7 116695589 116697504 - MGP_NODShiLtJ_P0085168 4931431F19Rik protein_coding protein_coding MGP_NODShiLtJ_T0083274.1 MGP_NODShiLtJ_G0031990.1 mouse_genomes_project 7 47339543 47404307 - MGP_NODShiLtJ_P0083274 protein_coding protein_coding MGP_NODShiLtJ_T0082050.1 MGP_NODShiLtJ_G0031705.1 mouse_genomes_project 7 26952802 26988126 + MGP_NODShiLtJ_P0082050 Cyp2a5 protein_coding protein_coding MGP_NODShiLtJ_T0010826.1 MGP_NODShiLtJ_G0008959.1 mouse_genomes_project 7 156109916 156109988 - Mir202 miRNA miRNA MGP_NODShiLtJ_T0015776.1 MGP_NODShiLtJ_G0013884.1 mouse_genomes_project 7 124255369 124255952 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085010.1 MGP_NODShiLtJ_G0032404.1 mouse_genomes_project 7 114047904 114094887 + MGP_NODShiLtJ_P0085010 Numa1 protein_coding protein_coding MGP_NODShiLtJ_T0085011.1 MGP_NODShiLtJ_G0032404.1 mouse_genomes_project 7 114048322 114094890 + MGP_NODShiLtJ_P0085011 Numa1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085012.1 MGP_NODShiLtJ_G0032404.1 mouse_genomes_project 7 114079998 114094883 + MGP_NODShiLtJ_P0085012 Numa1 protein_coding protein_coding MGP_NODShiLtJ_T0005253.1 MGP_NODShiLtJ_G0004451.1 mouse_genomes_project 7 159136898 159148868 + Igf2os antisense antisense MGP_NODShiLtJ_T0005254.1 MGP_NODShiLtJ_G0004451.1 mouse_genomes_project 7 159136917 159137903 + Igf2os antisense antisense MGP_NODShiLtJ_T0005255.1 MGP_NODShiLtJ_G0004451.1 mouse_genomes_project 7 159142345 159143300 + Igf2os antisense antisense MGP_NODShiLtJ_T0008735.1 MGP_NODShiLtJ_G0007049.1 mouse_genomes_project 7 24177498 24180471 + Gm44512 lincRNA lincRNA MGP_NODShiLtJ_T0008846.1 MGP_NODShiLtJ_G0007137.1 mouse_genomes_project 7 82251955 82257147 + Gm30459 lincRNA lincRNA MGP_NODShiLtJ_T0084854.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112412443 112421131 + MGP_NODShiLtJ_P0084854 Ucp2 protein_coding protein_coding MGP_NODShiLtJ_T0084855.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112412470 112416058 + Ucp2 protein_coding retained_intron MGP_NODShiLtJ_T0084856.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112412901 112416273 + MGP_NODShiLtJ_P0084856 Ucp2 protein_coding protein_coding MGP_NODShiLtJ_T0084857.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112413173 112416415 + MGP_NODShiLtJ_P0084857 Ucp2 protein_coding protein_coding MGP_NODShiLtJ_T0084858.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112415188 112417366 + MGP_NODShiLtJ_P0084858 Ucp2 protein_coding protein_coding MGP_NODShiLtJ_T0084859.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112416305 112417735 + Ucp2 protein_coding processed_transcript MGP_NODShiLtJ_T0084860.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112416377 112417850 + Ucp2 protein_coding processed_transcript MGP_NODShiLtJ_T0084861.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112417250 112417721 + Ucp2 protein_coding processed_transcript MGP_NODShiLtJ_T0084862.1 MGP_NODShiLtJ_G0032378.1 mouse_genomes_project 7 112417455 112418412 + Ucp2 protein_coding processed_transcript MGP_NODShiLtJ_T0082977.1 MGP_NODShiLtJ_G0031913.1 mouse_genomes_project 7 37060547 37092399 - MGP_NODShiLtJ_P0082977 Zfp507 protein_coding protein_coding MGP_NODShiLtJ_T0082978.1 MGP_NODShiLtJ_G0031913.1 mouse_genomes_project 7 37061930 37083462 - MGP_NODShiLtJ_P0082978 Zfp507 protein_coding protein_coding MGP_NODShiLtJ_T0082979.1 MGP_NODShiLtJ_G0031913.1 mouse_genomes_project 7 37064177 37092377 - MGP_NODShiLtJ_P0082979 Zfp507 protein_coding protein_coding MGP_NODShiLtJ_T0082980.1 MGP_NODShiLtJ_G0031913.1 mouse_genomes_project 7 37067046 37067215 - Zfp507 protein_coding processed_transcript MGP_NODShiLtJ_T0082981.1 MGP_NODShiLtJ_G0031913.1 mouse_genomes_project 7 37079771 37092396 - MGP_NODShiLtJ_P0082981 Zfp507 protein_coding protein_coding MGP_NODShiLtJ_T0082982.1 MGP_NODShiLtJ_G0031913.1 mouse_genomes_project 7 37090415 37092364 - Zfp507 protein_coding retained_intron MGP_NODShiLtJ_T0082983.1 MGP_NODShiLtJ_G0031913.1 mouse_genomes_project 7 37091426 37092413 - Zfp507 protein_coding retained_intron MGP_NODShiLtJ_T0087460.1 MGP_NODShiLtJ_G0033080.1 mouse_genomes_project 7 160024083 160025080 - MGP_NODShiLtJ_P0087460 Phlda2 protein_coding protein_coding MGP_NODShiLtJ_T0085080.1 MGP_NODShiLtJ_G0032424.1 mouse_genomes_project 7 114695260 114696298 + MGP_NODShiLtJ_P0085080 Olfr550 protein_coding protein_coding MGP_NODShiLtJ_T0084592.1 MGP_NODShiLtJ_G0032317.1 mouse_genomes_project 7 100721358 100729258 - MGP_NODShiLtJ_P0084592 Tmem126a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084593.1 MGP_NODShiLtJ_G0032317.1 mouse_genomes_project 7 100721363 100729279 - MGP_NODShiLtJ_P0084593 Tmem126a protein_coding protein_coding MGP_NODShiLtJ_T0084594.1 MGP_NODShiLtJ_G0032317.1 mouse_genomes_project 7 100727254 100729258 - Tmem126a protein_coding retained_intron MGP_NODShiLtJ_T0101392.1 MGP_NODShiLtJ_G0039602.1 mouse_genomes_project 7 34503236 34542600 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101393.1 MGP_NODShiLtJ_G0039602.1 mouse_genomes_project 7 34503402 34504780 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0082248.1 MGP_NODShiLtJ_G0031757.1 mouse_genomes_project 7 28790979 28793450 - MGP_NODShiLtJ_P0082248 Zfp36 protein_coding protein_coding MGP_NODShiLtJ_T0005122.1 MGP_NODShiLtJ_G0004357.1 mouse_genomes_project 7 28305052 28308033 + Gm26891 antisense antisense MGP_NODShiLtJ_T0102111.1 MGP_NODShiLtJ_G0040277.1 mouse_genomes_project 7 31694464 31694938 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099533.1 MGP_NODShiLtJ_G0037927.1 mouse_genomes_project 7 158889886 158889994 + Gm26143 snRNA snRNA MGP_NODShiLtJ_T0085362.1 MGP_NODShiLtJ_G0032589.1 mouse_genomes_project 7 120142720 120144627 + MGP_NODShiLtJ_P0085362 protein_coding protein_coding MGP_NODShiLtJ_T0084896.1 MGP_NODShiLtJ_G0032386.1 mouse_genomes_project 7 112813851 112877301 - MGP_NODShiLtJ_P0084896 Arhgef17 protein_coding protein_coding MGP_NODShiLtJ_T0084897.1 MGP_NODShiLtJ_G0032386.1 mouse_genomes_project 7 112813881 112839135 - MGP_NODShiLtJ_P0084897 Arhgef17 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0015718.1 MGP_NODShiLtJ_G0013826.1 mouse_genomes_project 7 80317264 80318264 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082350.1 MGP_NODShiLtJ_G0031783.1 mouse_genomes_project 7 29479413 29493130 - MGP_NODShiLtJ_P0082350 Eif3k protein_coding protein_coding MGP_NODShiLtJ_T0084259.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88490473 88520965 - Rccd1 protein_coding retained_intron MGP_NODShiLtJ_T0084274.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88515062 88525505 - MGP_NODShiLtJ_P0084274 Rccd1 protein_coding protein_coding MGP_NODShiLtJ_T0084275.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88517560 88525206 - Rccd1 protein_coding retained_intron MGP_NODShiLtJ_T0084276.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88517560 88525525 - MGP_NODShiLtJ_P0084276 Rccd1 protein_coding protein_coding MGP_NODShiLtJ_T0084277.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88517607 88525535 - Rccd1 protein_coding retained_intron MGP_NODShiLtJ_T0084278.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88517609 88520071 - Rccd1 protein_coding retained_intron MGP_NODShiLtJ_T0084279.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88521782 88525201 - MGP_NODShiLtJ_P0084279 Rccd1 protein_coding protein_coding MGP_NODShiLtJ_T0084280.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88522094 88525234 - Rccd1 protein_coding retained_intron MGP_NODShiLtJ_T0084281.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88523489 88525215 - Rccd1 protein_coding retained_intron MGP_NODShiLtJ_T0084282.1 MGP_NODShiLtJ_G0032226.1 mouse_genomes_project 7 88524850 88525482 - Rccd1 protein_coding processed_transcript MGP_NODShiLtJ_T0008951.1 MGP_NODShiLtJ_G0007198.1 mouse_genomes_project 7 142664989 142670662 + Gm45184 lincRNA lincRNA MGP_NODShiLtJ_T0102118.1 MGP_NODShiLtJ_G0040284.1 mouse_genomes_project 7 34808361 34810124 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082759.1 MGP_NODShiLtJ_G0031871.1 mouse_genomes_project 7 31794708 31803639 - MGP_NODShiLtJ_P0082759 Fxyd7 protein_coding protein_coding MGP_NODShiLtJ_T0082760.1 MGP_NODShiLtJ_G0031871.1 mouse_genomes_project 7 31794708 31803703 - MGP_NODShiLtJ_P0082760 Fxyd7 protein_coding protein_coding MGP_NODShiLtJ_T0085225.1 MGP_NODShiLtJ_G0032541.1 mouse_genomes_project 7 117846303 117847242 + MGP_NODShiLtJ_P0085225 Olfr677 protein_coding protein_coding MGP_NODShiLtJ_T0085222.1 MGP_NODShiLtJ_G0032538.1 mouse_genomes_project 7 117653517 117654456 - MGP_NODShiLtJ_P0085222 Olfr670 protein_coding protein_coding MGP_NODShiLtJ_T0082133.1 MGP_NODShiLtJ_G0031727.1 mouse_genomes_project 7 27771112 27774521 + MGP_NODShiLtJ_P0082133 Sertad1 protein_coding protein_coding MGP_NODShiLtJ_T0082134.1 MGP_NODShiLtJ_G0031727.1 mouse_genomes_project 7 27771577 27773712 + MGP_NODShiLtJ_P0082134 Sertad1 protein_coding protein_coding MGP_NODShiLtJ_T0002203.1 MGP_NODShiLtJ_G0002115.1 mouse_genomes_project 7 80744950 80747022 + TEC TEC MGP_NODShiLtJ_T0080808.1 MGP_NODShiLtJ_G0031324.1 mouse_genomes_project 7 58121 70290 - AU018091 protein_coding processed_transcript MGP_NODShiLtJ_T0080809.1 MGP_NODShiLtJ_G0031324.1 mouse_genomes_project 7 58121 74852 - MGP_NODShiLtJ_P0080809 AU018091 protein_coding protein_coding MGP_NODShiLtJ_T0080810.1 MGP_NODShiLtJ_G0031324.1 mouse_genomes_project 7 68132 74754 - MGP_NODShiLtJ_P0080810 AU018091 protein_coding protein_coding MGP_NODShiLtJ_T0087031.1 MGP_NODShiLtJ_G0032989.1 mouse_genomes_project 7 156788068 156789347 + MGP_NODShiLtJ_P0087031 protein_coding protein_coding MGP_NODShiLtJ_T0085084.1 MGP_NODShiLtJ_G0032428.1 mouse_genomes_project 7 114773306 114774260 + MGP_NODShiLtJ_P0085084 Olfr554 protein_coding protein_coding MGP_NODShiLtJ_T0083543.1 MGP_NODShiLtJ_G0032063.1 mouse_genomes_project 7 48581837 48620977 - MGP_NODShiLtJ_P0083543 Sult2b1 protein_coding protein_coding MGP_NODShiLtJ_T0083544.1 MGP_NODShiLtJ_G0032063.1 mouse_genomes_project 7 48581854 48595759 - MGP_NODShiLtJ_P0083544 Sult2b1 protein_coding protein_coding MGP_NODShiLtJ_T0083545.1 MGP_NODShiLtJ_G0032063.1 mouse_genomes_project 7 48587001 48595759 - MGP_NODShiLtJ_P0083545 Sult2b1 protein_coding protein_coding MGP_NODShiLtJ_T0083546.1 MGP_NODShiLtJ_G0032063.1 mouse_genomes_project 7 48587035 48596022 - Sult2b1 protein_coding processed_transcript MGP_NODShiLtJ_T0083547.1 MGP_NODShiLtJ_G0032063.1 mouse_genomes_project 7 48619838 48620895 - Sult2b1 protein_coding processed_transcript MGP_NODShiLtJ_T0084350.1 MGP_NODShiLtJ_G0032236.1 mouse_genomes_project 7 89106203 89121343 + MGP_NODShiLtJ_P0084350 Zscan2 protein_coding protein_coding MGP_NODShiLtJ_T0084351.1 MGP_NODShiLtJ_G0032236.1 mouse_genomes_project 7 89106234 89108777 + MGP_NODShiLtJ_P0084351 Zscan2 protein_coding protein_coding MGP_NODShiLtJ_T0084352.1 MGP_NODShiLtJ_G0032236.1 mouse_genomes_project 7 89106236 89122262 + MGP_NODShiLtJ_P0084352 Zscan2 protein_coding protein_coding MGP_NODShiLtJ_T0084353.1 MGP_NODShiLtJ_G0032236.1 mouse_genomes_project 7 89107391 89122935 + MGP_NODShiLtJ_P0084353 Zscan2 protein_coding protein_coding MGP_NODShiLtJ_T0084354.1 MGP_NODShiLtJ_G0032236.1 mouse_genomes_project 7 89108198 89121472 + MGP_NODShiLtJ_P0084354 Zscan2 protein_coding protein_coding MGP_NODShiLtJ_T0081243.1 MGP_NODShiLtJ_G0031464.1 mouse_genomes_project 7 11204639 11212580 + MGP_NODShiLtJ_P0081243 Zfp324 protein_coding protein_coding MGP_NODShiLtJ_T0081244.1 MGP_NODShiLtJ_G0031464.1 mouse_genomes_project 7 11204646 11212994 + MGP_NODShiLtJ_P0081244 Zfp324 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081245.1 MGP_NODShiLtJ_G0031464.1 mouse_genomes_project 7 11204668 11212557 + MGP_NODShiLtJ_P0081245 Zfp324 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084383.1 MGP_NODShiLtJ_G0032241.1 mouse_genomes_project 7 89326765 89379256 + MGP_NODShiLtJ_P0084383 Alpk3 protein_coding protein_coding MGP_NODShiLtJ_T0084384.1 MGP_NODShiLtJ_G0032241.1 mouse_genomes_project 7 89326795 89377965 + MGP_NODShiLtJ_P0084384 Alpk3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084385.1 MGP_NODShiLtJ_G0032241.1 mouse_genomes_project 7 89367715 89368578 + Alpk3 protein_coding retained_intron MGP_NODShiLtJ_T0015730.1 MGP_NODShiLtJ_G0013838.1 mouse_genomes_project 7 87909486 87909826 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084514.1 MGP_NODShiLtJ_G0032287.1 mouse_genomes_project 7 95790496 95824027 + MGP_NODShiLtJ_P0084514 Olfr301 protein_coding protein_coding MGP_NODShiLtJ_T0015625.1 MGP_NODShiLtJ_G0013733.1 mouse_genomes_project 7 28256841 28259160 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002193.1 MGP_NODShiLtJ_G0002105.1 mouse_genomes_project 7 70157217 70157576 + TEC TEC MGP_NODShiLtJ_T0015582.1 MGP_NODShiLtJ_G0013690.1 mouse_genomes_project 7 11962045 11963620 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082946.1 MGP_NODShiLtJ_G0031908.1 mouse_genomes_project 7 36815466 36824731 - MGP_NODShiLtJ_P0082946 Nudt19 protein_coding protein_coding MGP_NODShiLtJ_T0082947.1 MGP_NODShiLtJ_G0031908.1 mouse_genomes_project 7 36815977 36823630 - Nudt19 protein_coding processed_transcript MGP_NODShiLtJ_T0082948.1 MGP_NODShiLtJ_G0031908.1 mouse_genomes_project 7 36816432 36820498 - Nudt19 protein_coding retained_intron MGP_NODShiLtJ_T0081276.1 MGP_NODShiLtJ_G0031471.1 mouse_genomes_project 7 11288230 11299583 - MGP_NODShiLtJ_P0081276 Mzf1 protein_coding protein_coding MGP_NODShiLtJ_T0081277.1 MGP_NODShiLtJ_G0031471.1 mouse_genomes_project 7 11288234 11300126 - MGP_NODShiLtJ_P0081277 Mzf1 protein_coding protein_coding MGP_NODShiLtJ_T0081278.1 MGP_NODShiLtJ_G0031471.1 mouse_genomes_project 7 11288236 11300783 - Mzf1 protein_coding retained_intron MGP_NODShiLtJ_T0081279.1 MGP_NODShiLtJ_G0031471.1 mouse_genomes_project 7 11288256 11300956 - MGP_NODShiLtJ_P0081279 Mzf1 protein_coding protein_coding MGP_NODShiLtJ_T0081280.1 MGP_NODShiLtJ_G0031471.1 mouse_genomes_project 7 11295014 11301165 - Mzf1 protein_coding retained_intron MGP_NODShiLtJ_T0083387.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48003544 48021668 + MGP_NODShiLtJ_P0083387 Tead2 protein_coding protein_coding MGP_NODShiLtJ_T0083388.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48003582 48008716 + Tead2 protein_coding retained_intron MGP_NODShiLtJ_T0083389.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48003601 48005998 + Tead2 protein_coding retained_intron MGP_NODShiLtJ_T0083390.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48003614 48013589 + MGP_NODShiLtJ_P0083390 Tead2 protein_coding protein_coding MGP_NODShiLtJ_T0083391.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48003643 48021668 + MGP_NODShiLtJ_P0083391 Tead2 protein_coding protein_coding MGP_NODShiLtJ_T0083392.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48004464 48006961 + MGP_NODShiLtJ_P0083392 Tead2 protein_coding protein_coding MGP_NODShiLtJ_T0083393.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48005002 48008769 + Tead2 protein_coding retained_intron MGP_NODShiLtJ_T0083394.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48005002 48021684 + MGP_NODShiLtJ_P0083394 Tead2 protein_coding protein_coding MGP_NODShiLtJ_T0083395.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48005010 48020977 + MGP_NODShiLtJ_P0083395 Tead2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083396.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48005830 48011538 + Tead2 protein_coding processed_transcript MGP_NODShiLtJ_T0083397.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48007699 48008496 + Tead2 protein_coding retained_intron MGP_NODShiLtJ_T0083398.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48008237 48008992 + Tead2 protein_coding processed_transcript MGP_NODShiLtJ_T0083399.1 MGP_NODShiLtJ_G0032027.1 mouse_genomes_project 7 48020196 48021135 + Tead2 protein_coding processed_transcript MGP_NODShiLtJ_T0083893.1 MGP_NODShiLtJ_G0032155.1 mouse_genomes_project 7 70832425 70838577 + Mcee protein_coding processed_transcript MGP_NODShiLtJ_T0083894.1 MGP_NODShiLtJ_G0032155.1 mouse_genomes_project 7 70832462 70852561 + MGP_NODShiLtJ_P0083894 Mcee protein_coding protein_coding MGP_NODShiLtJ_T0083895.1 MGP_NODShiLtJ_G0032155.1 mouse_genomes_project 7 70832557 70852557 + MGP_NODShiLtJ_P0083895 Mcee protein_coding protein_coding MGP_NODShiLtJ_T0083896.1 MGP_NODShiLtJ_G0032155.1 mouse_genomes_project 7 70832592 70852557 + MGP_NODShiLtJ_P0083896 Mcee protein_coding protein_coding MGP_NODShiLtJ_T0015723.1 MGP_NODShiLtJ_G0013831.1 mouse_genomes_project 7 82335984 82336114 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082561.1 MGP_NODShiLtJ_G0031834.1 mouse_genomes_project 7 31082498 31093153 - MGP_NODShiLtJ_P0082561 Aplp1 protein_coding protein_coding MGP_NODShiLtJ_T0081181.1 MGP_NODShiLtJ_G0031429.1 mouse_genomes_project 7 4667632 4680778 + MGP_NODShiLtJ_P0081181 Zfp418 protein_coding protein_coding MGP_NODShiLtJ_T0082233.1 MGP_NODShiLtJ_G0031754.1 mouse_genomes_project 7 28725987 28752439 - MGP_NODShiLtJ_P0082233 Supt5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082234.1 MGP_NODShiLtJ_G0031754.1 mouse_genomes_project 7 28725996 28752395 - MGP_NODShiLtJ_P0082234 Supt5 protein_coding protein_coding MGP_NODShiLtJ_T0086533.1 MGP_NODShiLtJ_G0032869.1 mouse_genomes_project 7 143158115 143167344 - MGP_NODShiLtJ_P0086533 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097831.1 MGP_NODShiLtJ_G0036243.1 mouse_genomes_project 7 126885643 126887070 + pseudogene pseudogene MGP_NODShiLtJ_T0085121.1 MGP_NODShiLtJ_G0032462.1 mouse_genomes_project 7 115628307 115629133 - MGP_NODShiLtJ_P0085121 protein_coding protein_coding MGP_NODShiLtJ_T0082955.1 MGP_NODShiLtJ_G0031910.1 mouse_genomes_project 7 36860796 36867381 - MGP_NODShiLtJ_P0082955 Rgs9bp protein_coding protein_coding MGP_NODShiLtJ_T0082330.1 MGP_NODShiLtJ_G0031779.1 mouse_genomes_project 7 29326283 29335768 + MGP_NODShiLtJ_P0082330 Lgals4 protein_coding protein_coding MGP_NODShiLtJ_T0082331.1 MGP_NODShiLtJ_G0031779.1 mouse_genomes_project 7 29326585 29328277 + Lgals4 protein_coding retained_intron MGP_NODShiLtJ_T0082332.1 MGP_NODShiLtJ_G0031779.1 mouse_genomes_project 7 29326616 29330487 + Lgals4 protein_coding retained_intron MGP_NODShiLtJ_T0082333.1 MGP_NODShiLtJ_G0031779.1 mouse_genomes_project 7 29326952 29333627 + MGP_NODShiLtJ_P0082333 Lgals4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082334.1 MGP_NODShiLtJ_G0031779.1 mouse_genomes_project 7 29328359 29335761 + Lgals4 protein_coding retained_intron MGP_NODShiLtJ_T0082335.1 MGP_NODShiLtJ_G0031779.1 mouse_genomes_project 7 29333418 29335763 + Lgals4 protein_coding retained_intron MGP_NODShiLtJ_T0087331.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158899983 158905154 + Syt8 protein_coding processed_transcript MGP_NODShiLtJ_T0087332.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158900079 158904247 + Syt8 protein_coding processed_transcript MGP_NODShiLtJ_T0087333.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158900110 158905675 + MGP_NODShiLtJ_P0087333 Syt8 protein_coding protein_coding MGP_NODShiLtJ_T0087334.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158900134 158905607 + Syt8 protein_coding retained_intron MGP_NODShiLtJ_T0087335.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158900134 158905607 + MGP_NODShiLtJ_P0087335 Syt8 protein_coding protein_coding MGP_NODShiLtJ_T0087336.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158900134 158905607 + MGP_NODShiLtJ_P0087336 Syt8 protein_coding protein_coding MGP_NODShiLtJ_T0087337.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158902058 158905584 + MGP_NODShiLtJ_P0087337 Syt8 protein_coding protein_coding MGP_NODShiLtJ_T0087338.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158903410 158903821 + MGP_NODShiLtJ_P0087338 Syt8 protein_coding protein_coding MGP_NODShiLtJ_T0087339.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158903699 158905263 + Syt8 protein_coding retained_intron MGP_NODShiLtJ_T0087340.1 MGP_NODShiLtJ_G0033062.1 mouse_genomes_project 7 158904293 158905591 + Syt8 protein_coding retained_intron MGP_NODShiLtJ_T0102059.1 MGP_NODShiLtJ_G0040226.1 mouse_genomes_project 7 8114074 8173767 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099481.1 MGP_NODShiLtJ_G0037875.1 mouse_genomes_project 7 39225656 39225762 - Gm22302 snRNA snRNA MGP_NODShiLtJ_T0081117.1 MGP_NODShiLtJ_G0031398.1 mouse_genomes_project 7 2369842 2371126 - MGP_NODShiLtJ_P0081117 Vmn1r55 protein_coding protein_coding MGP_NODShiLtJ_T0083037.1 MGP_NODShiLtJ_G0031928.1 mouse_genomes_project 7 43514285 43566472 - MGP_NODShiLtJ_P0083037 Gm6871 protein_coding protein_coding MGP_NODShiLtJ_T0083038.1 MGP_NODShiLtJ_G0031928.1 mouse_genomes_project 7 43553539 43566436 - MGP_NODShiLtJ_P0083038 Gm6871 protein_coding protein_coding MGP_NODShiLtJ_T0081167.1 MGP_NODShiLtJ_G0031423.1 mouse_genomes_project 7 3999657 4000584 + MGP_NODShiLtJ_P0081167 Olfr1350 protein_coding protein_coding MGP_NODShiLtJ_T0084597.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 101501726 103121707 + MGP_NODShiLtJ_P0084597 Dlg2 protein_coding protein_coding MGP_NODShiLtJ_T0084598.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 101501746 102937737 + Dlg2 protein_coding processed_transcript MGP_NODShiLtJ_T0084599.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 101501748 103121707 + MGP_NODShiLtJ_P0084599 Dlg2 protein_coding protein_coding MGP_NODShiLtJ_T0084600.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 102244382 102627362 + Dlg2 protein_coding retained_intron MGP_NODShiLtJ_T0084601.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 102291731 103121707 + MGP_NODShiLtJ_P0084601 Dlg2 protein_coding protein_coding MGP_NODShiLtJ_T0084602.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 102291982 102550662 + Dlg2 protein_coding processed_transcript MGP_NODShiLtJ_T0084603.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 102291984 103119320 + MGP_NODShiLtJ_P0084603 Dlg2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084604.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 102700069 103121707 + MGP_NODShiLtJ_P0084604 Dlg2 protein_coding protein_coding MGP_NODShiLtJ_T0084605.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 102824746 102939435 + Dlg2 protein_coding retained_intron MGP_NODShiLtJ_T0084606.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 102877743 103121187 + Dlg2 protein_coding processed_transcript MGP_NODShiLtJ_T0084607.1 MGP_NODShiLtJ_G0032319.1 mouse_genomes_project 7 102877947 103104450 + Dlg2 protein_coding processed_transcript MGP_NODShiLtJ_T0083346.1 MGP_NODShiLtJ_G0032006.1 mouse_genomes_project 7 47746060 47755938 - MGP_NODShiLtJ_P0083346 protein_coding protein_coding MGP_NODShiLtJ_T0085412.1 MGP_NODShiLtJ_G0032632.1 mouse_genomes_project 7 122169380 122172383 + MGP_NODShiLtJ_P0085412 Olfr507 protein_coding protein_coding MGP_NODShiLtJ_T0008927.1 MGP_NODShiLtJ_G0007185.1 mouse_genomes_project 7 139624315 139726531 - 3100003L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0083082.1 MGP_NODShiLtJ_G0031944.1 mouse_genomes_project 7 46039927 46041104 + MGP_NODShiLtJ_P0083082 Nkg7 protein_coding protein_coding MGP_NODShiLtJ_T0083083.1 MGP_NODShiLtJ_G0031944.1 mouse_genomes_project 7 46039984 46041101 + MGP_NODShiLtJ_P0083083 Nkg7 protein_coding protein_coding MGP_NODShiLtJ_T0083084.1 MGP_NODShiLtJ_G0031944.1 mouse_genomes_project 7 46040358 46041104 + Nkg7 protein_coding retained_intron MGP_NODShiLtJ_T0081003.1 MGP_NODShiLtJ_G0031360.1 mouse_genomes_project 7 1607738 1619148 - MGP_NODShiLtJ_P0081003 Dnaaf3 protein_coding protein_coding MGP_NODShiLtJ_T0102173.1 MGP_NODShiLtJ_G0040339.1 mouse_genomes_project 7 94583663 94585428 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015678.1 MGP_NODShiLtJ_G0013786.1 mouse_genomes_project 7 45588839 45589187 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083359.1 MGP_NODShiLtJ_G0032012.1 mouse_genomes_project 7 47800101 47825899 - MGP_NODShiLtJ_P0083359 Prr12 protein_coding protein_coding MGP_NODShiLtJ_T0085130.1 MGP_NODShiLtJ_G0032471.1 mouse_genomes_project 7 115767306 115768254 - MGP_NODShiLtJ_P0085130 Olfr610 protein_coding protein_coding MGP_NODShiLtJ_T0082516.1 MGP_NODShiLtJ_G0031825.1 mouse_genomes_project 7 30933631 30954368 + MGP_NODShiLtJ_P0082516 Clip3 protein_coding protein_coding MGP_NODShiLtJ_T0082517.1 MGP_NODShiLtJ_G0031825.1 mouse_genomes_project 7 30933641 30954375 + MGP_NODShiLtJ_P0082517 Clip3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082518.1 MGP_NODShiLtJ_G0031825.1 mouse_genomes_project 7 30933687 30934633 + Clip3 protein_coding retained_intron MGP_NODShiLtJ_T0082519.1 MGP_NODShiLtJ_G0031825.1 mouse_genomes_project 7 30933688 30940604 + MGP_NODShiLtJ_P0082519 Clip3 protein_coding protein_coding MGP_NODShiLtJ_T0082520.1 MGP_NODShiLtJ_G0031825.1 mouse_genomes_project 7 30933698 30940360 + MGP_NODShiLtJ_P0082520 Clip3 protein_coding protein_coding MGP_NODShiLtJ_T0082521.1 MGP_NODShiLtJ_G0031825.1 mouse_genomes_project 7 30933917 30940371 + MGP_NODShiLtJ_P0082521 Clip3 protein_coding protein_coding MGP_NODShiLtJ_T0082522.1 MGP_NODShiLtJ_G0031825.1 mouse_genomes_project 7 30940553 30943476 + Clip3 protein_coding processed_transcript MGP_NODShiLtJ_T0082523.1 MGP_NODShiLtJ_G0031825.1 mouse_genomes_project 7 30949280 30953305 + Clip3 protein_coding processed_transcript MGP_NODShiLtJ_T0008906.1 MGP_NODShiLtJ_G0007172.1 mouse_genomes_project 7 127759399 127781913 + Gm29507 lincRNA lincRNA MGP_NODShiLtJ_T0085102.1 MGP_NODShiLtJ_G0032445.1 mouse_genomes_project 7 115141574 115142531 - MGP_NODShiLtJ_P0085102 Olfr575 protein_coding protein_coding MGP_NODShiLtJ_T0002213.1 MGP_NODShiLtJ_G0002124.1 mouse_genomes_project 7 83019322 83020718 + TEC TEC MGP_NODShiLtJ_T0086577.1 MGP_NODShiLtJ_G0032877.1 mouse_genomes_project 7 143299563 143306648 + MGP_NODShiLtJ_P0086577 Trim72 protein_coding protein_coding MGP_NODShiLtJ_T0086578.1 MGP_NODShiLtJ_G0032877.1 mouse_genomes_project 7 143299992 143306291 + MGP_NODShiLtJ_P0086578 Trim72 protein_coding protein_coding MGP_NODShiLtJ_T0086828.1 MGP_NODShiLtJ_G0032927.1 mouse_genomes_project 7 149349736 149364817 - MGP_NODShiLtJ_P0086828 Tex36 protein_coding protein_coding MGP_NODShiLtJ_T0086747.1 MGP_NODShiLtJ_G0032909.1 mouse_genomes_project 7 146970656 146995170 - MGP_NODShiLtJ_P0086747 2310057M21Rik protein_coding protein_coding MGP_NODShiLtJ_T0082269.1 MGP_NODShiLtJ_G0031764.1 mouse_genomes_project 7 28948001 28949614 - MGP_NODShiLtJ_P0082269 protein_coding protein_coding MGP_NODShiLtJ_T0086276.1 MGP_NODShiLtJ_G0032816.1 mouse_genomes_project 7 142098225 142115040 + MGP_NODShiLtJ_P0086276 Kctd13 protein_coding protein_coding MGP_NODShiLtJ_T0086277.1 MGP_NODShiLtJ_G0032816.1 mouse_genomes_project 7 142099267 142110735 + Kctd13 protein_coding retained_intron MGP_NODShiLtJ_T0086278.1 MGP_NODShiLtJ_G0032816.1 mouse_genomes_project 7 142111456 142114376 + Kctd13 protein_coding retained_intron MGP_NODShiLtJ_T0086279.1 MGP_NODShiLtJ_G0032817.1 mouse_genomes_project 7 142114975 142118566 - MGP_NODShiLtJ_P0086279 protein_coding protein_coding MGP_NODShiLtJ_T0086280.1 MGP_NODShiLtJ_G0032817.1 mouse_genomes_project 7 142115395 142118989 - MGP_NODShiLtJ_P0086280 protein_coding protein_coding MGP_NODShiLtJ_T0086281.1 MGP_NODShiLtJ_G0032817.1 mouse_genomes_project 7 142115414 142118988 - MGP_NODShiLtJ_P0086281 protein_coding protein_coding MGP_NODShiLtJ_T0081163.1 MGP_NODShiLtJ_G0031419.1 mouse_genomes_project 7 3881436 3889324 - MGP_NODShiLtJ_P0081163 Olfr5 protein_coding protein_coding MGP_NODShiLtJ_T0015668.1 MGP_NODShiLtJ_G0013776.1 mouse_genomes_project 7 43693531 43696558 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005133.1 MGP_NODShiLtJ_G0004366.1 mouse_genomes_project 7 31590692 31591293 + Gm29439 antisense antisense MGP_NODShiLtJ_T0084658.1 MGP_NODShiLtJ_G0032332.1 mouse_genomes_project 7 109056095 109060852 - MGP_NODShiLtJ_P0084658 Thrsp protein_coding protein_coding MGP_NODShiLtJ_T0084659.1 MGP_NODShiLtJ_G0032332.1 mouse_genomes_project 7 109059272 109060641 - Thrsp protein_coding retained_intron MGP_NODShiLtJ_T0099495.1 MGP_NODShiLtJ_G0037889.1 mouse_genomes_project 7 81015060 81015165 - Gm26176 snRNA snRNA MGP_NODShiLtJ_T0086347.1 MGP_NODShiLtJ_G0032832.1 mouse_genomes_project 7 142387265 142398124 - MGP_NODShiLtJ_P0086347 Tbc1d10b protein_coding protein_coding MGP_NODShiLtJ_T0086348.1 MGP_NODShiLtJ_G0032832.1 mouse_genomes_project 7 142388528 142393552 - MGP_NODShiLtJ_P0086348 Tbc1d10b protein_coding protein_coding MGP_NODShiLtJ_T0086349.1 MGP_NODShiLtJ_G0032832.1 mouse_genomes_project 7 142388863 142389792 - Tbc1d10b protein_coding retained_intron MGP_NODShiLtJ_T0086350.1 MGP_NODShiLtJ_G0032832.1 mouse_genomes_project 7 142389168 142397403 - Tbc1d10b protein_coding processed_transcript MGP_NODShiLtJ_T0086351.1 MGP_NODShiLtJ_G0032832.1 mouse_genomes_project 7 142389628 142390761 - Tbc1d10b protein_coding retained_intron MGP_NODShiLtJ_T0086352.1 MGP_NODShiLtJ_G0032832.1 mouse_genomes_project 7 142389673 142393452 - Tbc1d10b protein_coding retained_intron MGP_NODShiLtJ_T0086353.1 MGP_NODShiLtJ_G0032832.1 mouse_genomes_project 7 142390059 142393493 - Tbc1d10b protein_coding retained_intron MGP_NODShiLtJ_T0086354.1 MGP_NODShiLtJ_G0032832.1 mouse_genomes_project 7 142392751 142393273 - Tbc1d10b protein_coding retained_intron MGP_NODShiLtJ_T0084798.1 MGP_NODShiLtJ_G0032361.1 mouse_genomes_project 7 111443626 111446648 - MGP_NODShiLtJ_P0084798 Tpbgl protein_coding protein_coding MGP_NODShiLtJ_T0082643.1 MGP_NODShiLtJ_G0031846.1 mouse_genomes_project 7 31251667 31254929 - MGP_NODShiLtJ_P0082643 Zbtb32 protein_coding protein_coding MGP_NODShiLtJ_T0082644.1 MGP_NODShiLtJ_G0031846.1 mouse_genomes_project 7 31251669 31260879 - MGP_NODShiLtJ_P0082644 Zbtb32 protein_coding protein_coding MGP_NODShiLtJ_T0082645.1 MGP_NODShiLtJ_G0031846.1 mouse_genomes_project 7 31259941 31260919 - Zbtb32 protein_coding processed_transcript MGP_NODShiLtJ_T0015817.1 MGP_NODShiLtJ_G0013925.1 mouse_genomes_project 7 158758040 158758609 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005193.1 MGP_NODShiLtJ_G0004409.1 mouse_genomes_project 7 103450604 103458760 - 4632427E13Rik antisense antisense MGP_NODShiLtJ_T0005194.1 MGP_NODShiLtJ_G0004409.1 mouse_genomes_project 7 103454937 103458769 - 4632427E13Rik antisense antisense MGP_NODShiLtJ_T0005195.1 MGP_NODShiLtJ_G0004409.1 mouse_genomes_project 7 103454958 103458769 - 4632427E13Rik antisense antisense MGP_NODShiLtJ_T0005196.1 MGP_NODShiLtJ_G0004409.1 mouse_genomes_project 7 103458006 103458760 - 4632427E13Rik antisense antisense MGP_NODShiLtJ_T0085551.1 MGP_NODShiLtJ_G0032673.1 mouse_genomes_project 7 125297482 125614225 - MGP_NODShiLtJ_P0085551 Galnt18 protein_coding protein_coding MGP_NODShiLtJ_T0085552.1 MGP_NODShiLtJ_G0032673.1 mouse_genomes_project 7 125297482 125614225 - MGP_NODShiLtJ_P0085552 Galnt18 protein_coding protein_coding MGP_NODShiLtJ_T0102143.1 MGP_NODShiLtJ_G0040309.1 mouse_genomes_project 7 46818898 46831224 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083456.1 MGP_NODShiLtJ_G0032040.1 mouse_genomes_project 7 48270048 48271520 - protein_coding processed_transcript MGP_NODShiLtJ_T0083457.1 MGP_NODShiLtJ_G0032040.1 mouse_genomes_project 7 48270068 48271562 - protein_coding retained_intron MGP_NODShiLtJ_T0085587.1 MGP_NODShiLtJ_G0032681.1 mouse_genomes_project 7 127173807 127288484 + MGP_NODShiLtJ_P0085587 Arntl protein_coding protein_coding MGP_NODShiLtJ_T0102181.1 MGP_NODShiLtJ_G0040347.1 mouse_genomes_project 7 95169216 95170742 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086847.1 MGP_NODShiLtJ_G0032931.1 mouse_genomes_project 7 149477172 149488608 + MGP_NODShiLtJ_P0086847 Bccip protein_coding protein_coding MGP_NODShiLtJ_T0086848.1 MGP_NODShiLtJ_G0032931.1 mouse_genomes_project 7 149477187 149482909 + Bccip protein_coding retained_intron MGP_NODShiLtJ_T0086849.1 MGP_NODShiLtJ_G0032931.1 mouse_genomes_project 7 149477241 149481776 + Bccip protein_coding processed_transcript MGP_NODShiLtJ_T0086850.1 MGP_NODShiLtJ_G0032931.1 mouse_genomes_project 7 149482204 149488404 + Bccip protein_coding processed_transcript MGP_NODShiLtJ_T0086851.1 MGP_NODShiLtJ_G0032931.1 mouse_genomes_project 7 149484841 149486678 + Bccip protein_coding retained_intron MGP_NODShiLtJ_T0083358.1 MGP_NODShiLtJ_G0032011.1 mouse_genomes_project 7 47787204 47794059 + MGP_NODShiLtJ_P0083358 Rras protein_coding unknown_likely_coding MGP_NODShiLtJ_T0086139.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141789215 141813264 + Sgf29 protein_coding processed_transcript MGP_NODShiLtJ_T0086140.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141789215 141822185 + MGP_NODShiLtJ_P0086140 Sgf29 protein_coding protein_coding MGP_NODShiLtJ_T0086141.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141789218 141814210 + MGP_NODShiLtJ_P0086141 Sgf29 protein_coding protein_coding MGP_NODShiLtJ_T0086142.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141789228 141813359 + Sgf29 protein_coding retained_intron MGP_NODShiLtJ_T0086143.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141789253 141821141 + Sgf29 protein_coding retained_intron MGP_NODShiLtJ_T0086144.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141789308 141821499 + MGP_NODShiLtJ_P0086144 Sgf29 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086145.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141801600 141821578 + MGP_NODShiLtJ_P0086145 Sgf29 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086146.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141813052 141819948 + Sgf29 protein_coding retained_intron MGP_NODShiLtJ_T0086147.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141820836 141821652 + MGP_NODShiLtJ_P0086147 Sgf29 protein_coding protein_coding MGP_NODShiLtJ_T0086148.1 MGP_NODShiLtJ_G0032798.1 mouse_genomes_project 7 141821290 141822039 + Sgf29 protein_coding processed_transcript MGP_NODShiLtJ_T0083337.1 MGP_NODShiLtJ_G0032001.1 mouse_genomes_project 7 47641109 47655055 - MGP_NODShiLtJ_P0083337 Med25 protein_coding protein_coding MGP_NODShiLtJ_T0099506.1 MGP_NODShiLtJ_G0037900.1 mouse_genomes_project 7 116855005 116855105 - Gm24783 snRNA snRNA MGP_NODShiLtJ_T0083380.1 MGP_NODShiLtJ_G0032022.1 mouse_genomes_project 7 47947238 47960626 + MGP_NODShiLtJ_P0083380 Slc17a7 protein_coding protein_coding MGP_NODShiLtJ_T0015626.1 MGP_NODShiLtJ_G0013734.1 mouse_genomes_project 7 30452218 30452634 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085152.1 MGP_NODShiLtJ_G0032491.1 mouse_genomes_project 7 116308871 116310367 - MGP_NODShiLtJ_P0085152 Hbb-y protein_coding protein_coding MGP_NODShiLtJ_T0085106.1 MGP_NODShiLtJ_G0032448.1 mouse_genomes_project 7 115184250 115185192 - MGP_NODShiLtJ_P0085106 Olfr578 protein_coding protein_coding MGP_NODShiLtJ_T0083025.1 MGP_NODShiLtJ_G0031923.1 mouse_genomes_project 7 42655615 42689495 + MGP_NODShiLtJ_P0083025 Vstm2b protein_coding protein_coding MGP_NODShiLtJ_T0083026.1 MGP_NODShiLtJ_G0031923.1 mouse_genomes_project 7 42657444 42688869 + MGP_NODShiLtJ_P0083026 Vstm2b protein_coding protein_coding MGP_NODShiLtJ_T0083027.1 MGP_NODShiLtJ_G0031923.1 mouse_genomes_project 7 42657498 42660951 + MGP_NODShiLtJ_P0083027 Vstm2b protein_coding protein_coding MGP_NODShiLtJ_T0083028.1 MGP_NODShiLtJ_G0031923.1 mouse_genomes_project 7 42658295 42660964 + MGP_NODShiLtJ_P0083028 Vstm2b protein_coding protein_coding MGP_NODShiLtJ_T0015705.1 MGP_NODShiLtJ_G0013813.1 mouse_genomes_project 7 61964992 61965595 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086748.1 MGP_NODShiLtJ_G0032910.1 mouse_genomes_project 7 147004496 147016792 + MGP_NODShiLtJ_P0086748 Pstk protein_coding protein_coding MGP_NODShiLtJ_T0086749.1 MGP_NODShiLtJ_G0032910.1 mouse_genomes_project 7 147004501 147016789 + MGP_NODShiLtJ_P0086749 Pstk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086750.1 MGP_NODShiLtJ_G0032910.1 mouse_genomes_project 7 147004512 147007619 + Pstk protein_coding processed_transcript MGP_NODShiLtJ_T0086751.1 MGP_NODShiLtJ_G0032910.1 mouse_genomes_project 7 147006390 147016786 + Pstk protein_coding retained_intron MGP_NODShiLtJ_T0086752.1 MGP_NODShiLtJ_G0032910.1 mouse_genomes_project 7 147012877 147016789 + Pstk protein_coding processed_transcript MGP_NODShiLtJ_T0086753.1 MGP_NODShiLtJ_G0032910.1 mouse_genomes_project 7 147013209 147016680 + Pstk protein_coding retained_intron MGP_NODShiLtJ_T0086754.1 MGP_NODShiLtJ_G0032910.1 mouse_genomes_project 7 147013450 147016785 + Pstk protein_coding processed_transcript MGP_NODShiLtJ_T0087109.1 MGP_NODShiLtJ_G0033018.1 mouse_genomes_project 7 157414714 157432511 - MGP_NODShiLtJ_P0087109 Ano9 protein_coding protein_coding MGP_NODShiLtJ_T0083548.1 MGP_NODShiLtJ_G0032064.1 mouse_genomes_project 7 48649209 48674261 + MGP_NODShiLtJ_P0083548 Lmtk3 protein_coding protein_coding MGP_NODShiLtJ_T0083549.1 MGP_NODShiLtJ_G0032064.1 mouse_genomes_project 7 48649272 48656397 + MGP_NODShiLtJ_P0083549 Lmtk3 protein_coding protein_coding MGP_NODShiLtJ_T0083550.1 MGP_NODShiLtJ_G0032064.1 mouse_genomes_project 7 48649418 48674226 + MGP_NODShiLtJ_P0083550 Lmtk3 protein_coding protein_coding MGP_NODShiLtJ_T0083551.1 MGP_NODShiLtJ_G0032064.1 mouse_genomes_project 7 48650851 48674261 + MGP_NODShiLtJ_P0083551 Lmtk3 protein_coding protein_coding MGP_NODShiLtJ_T0083552.1 MGP_NODShiLtJ_G0032064.1 mouse_genomes_project 7 48650858 48653420 + MGP_NODShiLtJ_P0083552 Lmtk3 protein_coding protein_coding MGP_NODShiLtJ_T0083553.1 MGP_NODShiLtJ_G0032064.1 mouse_genomes_project 7 48650981 48653230 + Lmtk3 protein_coding retained_intron MGP_NODShiLtJ_T0083554.1 MGP_NODShiLtJ_G0032064.1 mouse_genomes_project 7 48652028 48659670 + MGP_NODShiLtJ_P0083554 Lmtk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083555.1 MGP_NODShiLtJ_G0032064.1 mouse_genomes_project 7 48653375 48659709 + MGP_NODShiLtJ_P0083555 Lmtk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099485.1 MGP_NODShiLtJ_G0037879.1 mouse_genomes_project 7 48759427 48759512 - Gm22098 snRNA snRNA MGP_NODShiLtJ_T0098076.1 MGP_NODShiLtJ_G0036488.1 mouse_genomes_project 7 19491570 19491689 - n-R5s152 rRNA rRNA MGP_NODShiLtJ_T0008799.1 MGP_NODShiLtJ_G0007101.1 mouse_genomes_project 7 70408811 70431195 + Gm45055 lincRNA lincRNA MGP_NODShiLtJ_T0008800.1 MGP_NODShiLtJ_G0007101.1 mouse_genomes_project 7 70415989 70431165 + Gm45055 lincRNA lincRNA MGP_NODShiLtJ_T0005171.1 MGP_NODShiLtJ_G0004393.1 mouse_genomes_project 7 81830531 81852159 + Gm7580 antisense antisense MGP_NODShiLtJ_T0081252.1 MGP_NODShiLtJ_G0031466.1 mouse_genomes_project 7 11228204 11228973 - Slc27a5 protein_coding processed_transcript MGP_NODShiLtJ_T0081253.1 MGP_NODShiLtJ_G0031466.1 mouse_genomes_project 7 11228204 11239326 - MGP_NODShiLtJ_P0081253 Slc27a5 protein_coding protein_coding MGP_NODShiLtJ_T0081254.1 MGP_NODShiLtJ_G0031466.1 mouse_genomes_project 7 11228210 11239368 - MGP_NODShiLtJ_P0081254 Slc27a5 protein_coding protein_coding MGP_NODShiLtJ_T0081255.1 MGP_NODShiLtJ_G0031466.1 mouse_genomes_project 7 11233111 11236182 - Slc27a5 protein_coding retained_intron MGP_NODShiLtJ_T0081256.1 MGP_NODShiLtJ_G0031466.1 mouse_genomes_project 7 11233111 11238853 - MGP_NODShiLtJ_P0081256 Slc27a5 protein_coding protein_coding MGP_NODShiLtJ_T0081332.1 MGP_NODShiLtJ_G0031495.1 mouse_genomes_project 7 13278597 13311226 + MGP_NODShiLtJ_P0081332 protein_coding protein_coding MGP_NODShiLtJ_T0081333.1 MGP_NODShiLtJ_G0031495.1 mouse_genomes_project 7 13278597 13311380 + MGP_NODShiLtJ_P0081333 protein_coding protein_coding MGP_NODShiLtJ_T0081334.1 MGP_NODShiLtJ_G0031495.1 mouse_genomes_project 7 13278597 14328527 + MGP_NODShiLtJ_P0081334 protein_coding protein_coding MGP_NODShiLtJ_T0081335.1 MGP_NODShiLtJ_G0031495.1 mouse_genomes_project 7 13278597 13311384 + MGP_NODShiLtJ_P0081335 protein_coding protein_coding MGP_NODShiLtJ_T0085422.1 MGP_NODShiLtJ_G0032642.1 mouse_genomes_project 7 122482643 122483710 - MGP_NODShiLtJ_P0085422 Olfr519 protein_coding protein_coding MGP_NODShiLtJ_T0085423.1 MGP_NODShiLtJ_G0032642.1 mouse_genomes_project 7 122482643 122483860 - MGP_NODShiLtJ_P0085423 Olfr519 protein_coding protein_coding MGP_NODShiLtJ_T0085398.1 MGP_NODShiLtJ_G0032618.1 mouse_genomes_project 7 121518923 121519895 - MGP_NODShiLtJ_P0085398 Olfr482 protein_coding protein_coding MGP_NODShiLtJ_T0085350.1 MGP_NODShiLtJ_G0032578.1 mouse_genomes_project 7 119931624 119932671 - MGP_NODShiLtJ_P0085350 Olfr697 protein_coding protein_coding MGP_NODShiLtJ_T0002264.1 MGP_NODShiLtJ_G0002175.1 mouse_genomes_project 7 143057391 143060070 - TEC TEC MGP_NODShiLtJ_T0099488.1 MGP_NODShiLtJ_G0037882.1 mouse_genomes_project 7 57271241 57271349 + Gm22444 snRNA snRNA MGP_NODShiLtJ_T0085347.1 MGP_NODShiLtJ_G0032575.1 mouse_genomes_project 7 119855675 119856627 - MGP_NODShiLtJ_P0085347 Olfr693 protein_coding protein_coding MGP_NODShiLtJ_T0015677.1 MGP_NODShiLtJ_G0013785.1 mouse_genomes_project 7 45409674 45410460 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100785.1 MGP_NODShiLtJ_G0039179.1 mouse_genomes_project 7 157719506 157719636 - Gm25725 snoRNA snoRNA MGP_NODShiLtJ_T0081086.1 MGP_NODShiLtJ_G0031383.1 mouse_genomes_project 7 2156589 2162458 - MGP_NODShiLtJ_P0081086 Sbk3 protein_coding protein_coding MGP_NODShiLtJ_T0081087.1 MGP_NODShiLtJ_G0031383.1 mouse_genomes_project 7 2158857 2162665 - MGP_NODShiLtJ_P0081087 Sbk3 protein_coding protein_coding MGP_NODShiLtJ_T0084113.1 MGP_NODShiLtJ_G0032196.1 mouse_genomes_project 7 86826306 86837333 + MGP_NODShiLtJ_P0084113 Mrps11 protein_coding protein_coding MGP_NODShiLtJ_T0084114.1 MGP_NODShiLtJ_G0032196.1 mouse_genomes_project 7 86826500 86835587 + Mrps11 protein_coding retained_intron MGP_NODShiLtJ_T0084115.1 MGP_NODShiLtJ_G0032196.1 mouse_genomes_project 7 86826542 86833764 + Mrps11 protein_coding retained_intron MGP_NODShiLtJ_T0084116.1 MGP_NODShiLtJ_G0032196.1 mouse_genomes_project 7 86826543 86837333 + MGP_NODShiLtJ_P0084116 Mrps11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084117.1 MGP_NODShiLtJ_G0032196.1 mouse_genomes_project 7 86826557 86835274 + Mrps11 protein_coding retained_intron MGP_NODShiLtJ_T0084118.1 MGP_NODShiLtJ_G0032196.1 mouse_genomes_project 7 86826558 86833656 + Mrps11 protein_coding retained_intron MGP_NODShiLtJ_T0083857.1 MGP_NODShiLtJ_G0032150.1 mouse_genomes_project 7 70311454 70316322 + MGP_NODShiLtJ_P0083857 E030018B13Rik protein_coding protein_coding MGP_NODShiLtJ_T0083276.1 MGP_NODShiLtJ_G0031992.1 mouse_genomes_project 7 47456285 47467697 + MGP_NODShiLtJ_P0083276 Izumo2 protein_coding protein_coding MGP_NODShiLtJ_T0015622.1 MGP_NODShiLtJ_G0013730.1 mouse_genomes_project 7 27307824 27308175 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081809.1 MGP_NODShiLtJ_G0031645.1 mouse_genomes_project 7 24240367 24248978 + MGP_NODShiLtJ_P0081809 Zfp428 protein_coding protein_coding MGP_NODShiLtJ_T0081810.1 MGP_NODShiLtJ_G0031645.1 mouse_genomes_project 7 24240431 24249241 + MGP_NODShiLtJ_P0081810 Zfp428 protein_coding protein_coding MGP_NODShiLtJ_T0081811.1 MGP_NODShiLtJ_G0031645.1 mouse_genomes_project 7 24240459 24248662 + MGP_NODShiLtJ_P0081811 Zfp428 protein_coding protein_coding MGP_NODShiLtJ_T0081812.1 MGP_NODShiLtJ_G0031645.1 mouse_genomes_project 7 24240490 24249239 + MGP_NODShiLtJ_P0081812 Zfp428 protein_coding protein_coding MGP_NODShiLtJ_T0081107.1 MGP_NODShiLtJ_G0031395.1 mouse_genomes_project 7 2280162 2301108 + MGP_NODShiLtJ_P0081107 Epn1 protein_coding protein_coding MGP_NODShiLtJ_T0081108.1 MGP_NODShiLtJ_G0031395.1 mouse_genomes_project 7 2280167 2289883 + MGP_NODShiLtJ_P0081108 Epn1 protein_coding protein_coding MGP_NODShiLtJ_T0081109.1 MGP_NODShiLtJ_G0031395.1 mouse_genomes_project 7 2280191 2300710 + MGP_NODShiLtJ_P0081109 Epn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081110.1 MGP_NODShiLtJ_G0031395.1 mouse_genomes_project 7 2280195 2283796 + MGP_NODShiLtJ_P0081110 Epn1 protein_coding protein_coding MGP_NODShiLtJ_T0081111.1 MGP_NODShiLtJ_G0031395.1 mouse_genomes_project 7 2280220 2301106 + MGP_NODShiLtJ_P0081111 Epn1 protein_coding protein_coding MGP_NODShiLtJ_T0081112.1 MGP_NODShiLtJ_G0031395.1 mouse_genomes_project 7 2283544 2296674 + Epn1 protein_coding processed_transcript MGP_NODShiLtJ_T0081113.1 MGP_NODShiLtJ_G0031395.1 mouse_genomes_project 7 2289759 2294452 + Epn1 protein_coding retained_intron MGP_NODShiLtJ_T0085143.1 MGP_NODShiLtJ_G0032483.1 mouse_genomes_project 7 116146427 116147372 - MGP_NODShiLtJ_P0085143 Olfr629 protein_coding protein_coding MGP_NODShiLtJ_T0008920.1 MGP_NODShiLtJ_G0007179.1 mouse_genomes_project 7 130876536 130880929 + lincRNA lincRNA MGP_NODShiLtJ_T0085071.1 MGP_NODShiLtJ_G0032416.1 mouse_genomes_project 7 114369269 114553319 + MGP_NODShiLtJ_P0085071 Stim1 protein_coding protein_coding MGP_NODShiLtJ_T0083636.1 MGP_NODShiLtJ_G0032087.1 mouse_genomes_project 7 49665853 49668330 - MGP_NODShiLtJ_P0083636 Saa1 protein_coding protein_coding MGP_NODShiLtJ_T0087047.1 MGP_NODShiLtJ_G0033000.1 mouse_genomes_project 7 157117753 157118976 + MGP_NODShiLtJ_P0087047 Scgb1c1 protein_coding protein_coding MGP_NODShiLtJ_T0085357.1 MGP_NODShiLtJ_G0032584.1 mouse_genomes_project 7 120061466 120062426 + MGP_NODShiLtJ_P0085357 Olfr703 protein_coding protein_coding MGP_NODShiLtJ_T0081155.1 MGP_NODShiLtJ_G0031413.1 mouse_genomes_project 7 3765205 3781459 + MGP_NODShiLtJ_P0081155 Zfp28 protein_coding protein_coding MGP_NODShiLtJ_T0102086.1 MGP_NODShiLtJ_G0040253.1 mouse_genomes_project 7 12962353 12965611 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098444.1 MGP_NODShiLtJ_G0036845.1 mouse_genomes_project 7 36259830 36260981 - Gm44836 sense_intronic sense_intronic MGP_NODShiLtJ_T0081718.1 MGP_NODShiLtJ_G0031609.1 mouse_genomes_project 7 19356394 19373961 - MGP_NODShiLtJ_P0081718 Pvr protein_coding protein_coding MGP_NODShiLtJ_T0081719.1 MGP_NODShiLtJ_G0031609.1 mouse_genomes_project 7 19357890 19362736 - Pvr protein_coding retained_intron MGP_NODShiLtJ_T0081720.1 MGP_NODShiLtJ_G0031609.1 mouse_genomes_project 7 19367707 19373914 - Pvr protein_coding retained_intron MGP_NODShiLtJ_T0081721.1 MGP_NODShiLtJ_G0031609.1 mouse_genomes_project 7 19369208 19373914 - Pvr protein_coding retained_intron MGP_NODShiLtJ_T0081535.1 MGP_NODShiLtJ_G0031562.1 mouse_genomes_project 7 18364988 18402672 + MGP_NODShiLtJ_P0081535 Sympk protein_coding protein_coding MGP_NODShiLtJ_T0081536.1 MGP_NODShiLtJ_G0031562.1 mouse_genomes_project 7 18365031 18384084 + MGP_NODShiLtJ_P0081536 Sympk protein_coding protein_coding MGP_NODShiLtJ_T0081537.1 MGP_NODShiLtJ_G0031562.1 mouse_genomes_project 7 18365034 18383198 + Sympk protein_coding retained_intron MGP_NODShiLtJ_T0081538.1 MGP_NODShiLtJ_G0031562.1 mouse_genomes_project 7 18365037 18399835 + MGP_NODShiLtJ_P0081538 Sympk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081539.1 MGP_NODShiLtJ_G0031562.1 mouse_genomes_project 7 18393747 18398133 + Sympk protein_coding processed_transcript MGP_NODShiLtJ_T0081540.1 MGP_NODShiLtJ_G0031562.1 mouse_genomes_project 7 18400418 18402667 + Sympk protein_coding processed_transcript MGP_NODShiLtJ_T0081541.1 MGP_NODShiLtJ_G0031562.1 mouse_genomes_project 7 18400485 18402673 + MGP_NODShiLtJ_P0081541 Sympk protein_coding protein_coding MGP_NODShiLtJ_T0081542.1 MGP_NODShiLtJ_G0031562.1 mouse_genomes_project 7 18400515 18401957 + Sympk protein_coding retained_intron MGP_NODShiLtJ_T0008769.1 MGP_NODShiLtJ_G0007081.1 mouse_genomes_project 7 39481165 39503481 + Gm44635 lincRNA lincRNA MGP_NODShiLtJ_T0084168.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87547929 87567820 - MGP_NODShiLtJ_P0084168 Polg protein_coding protein_coding MGP_NODShiLtJ_T0084169.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87551079 87553333 - MGP_NODShiLtJ_P0084169 Polg protein_coding protein_coding MGP_NODShiLtJ_T0084170.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87551080 87556779 - Polg protein_coding retained_intron MGP_NODShiLtJ_T0084171.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87551080 87567645 - Polg protein_coding retained_intron MGP_NODShiLtJ_T0084172.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87551080 87552316 - MGP_NODShiLtJ_P0084172 Polg protein_coding protein_coding MGP_NODShiLtJ_T0084173.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87551261 87567638 - MGP_NODShiLtJ_P0084173 Polg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084174.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87551275 87567656 - MGP_NODShiLtJ_P0084174 Polg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084175.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87551864 87553779 - Polg protein_coding retained_intron MGP_NODShiLtJ_T0084176.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87553285 87553621 - MGP_NODShiLtJ_P0084176 Polg protein_coding protein_coding MGP_NODShiLtJ_T0084177.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87553298 87555485 - MGP_NODShiLtJ_P0084177 Polg protein_coding protein_coding MGP_NODShiLtJ_T0084178.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87553628 87556039 - Polg protein_coding retained_intron MGP_NODShiLtJ_T0084179.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87555644 87557764 - Polg protein_coding retained_intron MGP_NODShiLtJ_T0084180.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87556229 87557093 - Polg protein_coding retained_intron MGP_NODShiLtJ_T0084181.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87557184 87561140 - MGP_NODShiLtJ_P0084181 Polg protein_coding protein_coding MGP_NODShiLtJ_T0084182.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87557768 87561495 - MGP_NODShiLtJ_P0084182 Polg protein_coding protein_coding MGP_NODShiLtJ_T0084183.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87561220 87563503 - Polg protein_coding processed_transcript MGP_NODShiLtJ_T0084184.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87565373 87567652 - Polg protein_coding retained_intron MGP_NODShiLtJ_T0084185.1 MGP_NODShiLtJ_G0032206.1 mouse_genomes_project 7 87566352 87567528 - MGP_NODShiLtJ_P0084185 Polg protein_coding protein_coding MGP_NODShiLtJ_T0086186.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934429 141937988 + MGP_NODShiLtJ_P0086186 Ypel3 protein_coding protein_coding MGP_NODShiLtJ_T0086187.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934449 141937985 + MGP_NODShiLtJ_P0086187 Ypel3 protein_coding protein_coding MGP_NODShiLtJ_T0086188.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934452 141935574 + MGP_NODShiLtJ_P0086188 Ypel3 protein_coding protein_coding MGP_NODShiLtJ_T0086189.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934473 141935899 + Ypel3 protein_coding processed_transcript MGP_NODShiLtJ_T0086190.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934473 141937987 + Ypel3 protein_coding processed_transcript MGP_NODShiLtJ_T0086191.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934475 141937988 + MGP_NODShiLtJ_P0086191 Ypel3 protein_coding protein_coding MGP_NODShiLtJ_T0086192.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934479 141937539 + MGP_NODShiLtJ_P0086192 Ypel3 protein_coding protein_coding MGP_NODShiLtJ_T0086193.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934621 141935347 + MGP_NODShiLtJ_P0086193 Ypel3 protein_coding protein_coding MGP_NODShiLtJ_T0086194.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934687 141937920 + MGP_NODShiLtJ_P0086194 Ypel3 protein_coding protein_coding MGP_NODShiLtJ_T0086195.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141934980 141937705 + Ypel3 protein_coding processed_transcript MGP_NODShiLtJ_T0086196.1 MGP_NODShiLtJ_G0032805.1 mouse_genomes_project 7 141935053 141935766 + Ypel3 protein_coding retained_intron MGP_NODShiLtJ_T0085672.1 MGP_NODShiLtJ_G0032698.1 mouse_genomes_project 7 130632836 130635525 - MGP_NODShiLtJ_P0085672 Rps13 protein_coding protein_coding MGP_NODShiLtJ_T0085673.1 MGP_NODShiLtJ_G0032698.1 mouse_genomes_project 7 130632841 130635463 - MGP_NODShiLtJ_P0085673 Rps13 protein_coding protein_coding MGP_NODShiLtJ_T0085674.1 MGP_NODShiLtJ_G0032698.1 mouse_genomes_project 7 130632842 130634512 - Rps13 protein_coding retained_intron MGP_NODShiLtJ_T0085675.1 MGP_NODShiLtJ_G0032698.1 mouse_genomes_project 7 130632843 130635460 - Rps13 protein_coding retained_intron MGP_NODShiLtJ_T0085676.1 MGP_NODShiLtJ_G0032698.1 mouse_genomes_project 7 130632843 130635465 - Rps13 protein_coding retained_intron MGP_NODShiLtJ_T0085677.1 MGP_NODShiLtJ_G0032698.1 mouse_genomes_project 7 130632843 130635496 - MGP_NODShiLtJ_P0085677 Rps13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085678.1 MGP_NODShiLtJ_G0032698.1 mouse_genomes_project 7 130633384 130635447 - Rps13 protein_coding retained_intron MGP_NODShiLtJ_T0085679.1 MGP_NODShiLtJ_G0032698.1 mouse_genomes_project 7 130634369 130635452 - Rps13 protein_coding retained_intron MGP_NODShiLtJ_T0002275.1 MGP_NODShiLtJ_G0002186.1 mouse_genomes_project 7 159865588 159869080 - TEC TEC MGP_NODShiLtJ_T0085160.1 MGP_NODShiLtJ_G0032499.1 mouse_genomes_project 7 116529329 116530280 - MGP_NODShiLtJ_P0085160 Olfr639 protein_coding protein_coding MGP_NODShiLtJ_T0081728.1 MGP_NODShiLtJ_G0031614.1 mouse_genomes_project 7 22900191 22911029 + protein_coding processed_transcript MGP_NODShiLtJ_T0102186.1 MGP_NODShiLtJ_G0040352.1 mouse_genomes_project 7 95871372 95872278 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100732.1 MGP_NODShiLtJ_G0039126.1 mouse_genomes_project 7 46926931 46927022 + Gm26247 snoRNA snoRNA MGP_NODShiLtJ_T0015779.1 MGP_NODShiLtJ_G0013887.1 mouse_genomes_project 7 128839979 128841106 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005239.1 MGP_NODShiLtJ_G0004440.1 mouse_genomes_project 7 143297513 143300775 - Gm15533 antisense antisense MGP_NODShiLtJ_T0005240.1 MGP_NODShiLtJ_G0004440.1 mouse_genomes_project 7 143298463 143300805 - Gm15533 antisense antisense MGP_NODShiLtJ_T0083849.1 MGP_NODShiLtJ_G0032148.1 mouse_genomes_project 7 69797061 70150372 + MGP_NODShiLtJ_P0083849 Otud7a protein_coding protein_coding MGP_NODShiLtJ_T0083850.1 MGP_NODShiLtJ_G0032148.1 mouse_genomes_project 7 69797087 70000771 + Otud7a protein_coding processed_transcript MGP_NODShiLtJ_T0083851.1 MGP_NODShiLtJ_G0032148.1 mouse_genomes_project 7 70037141 70149333 + MGP_NODShiLtJ_P0083851 Otud7a protein_coding protein_coding MGP_NODShiLtJ_T0083852.1 MGP_NODShiLtJ_G0032148.1 mouse_genomes_project 7 70071854 70150075 + MGP_NODShiLtJ_P0083852 Otud7a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083853.1 MGP_NODShiLtJ_G0032148.1 mouse_genomes_project 7 70146045 70149269 + MGP_NODShiLtJ_P0083853 Otud7a protein_coding protein_coding MGP_NODShiLtJ_T0085865.1 MGP_NODShiLtJ_G0032745.1 mouse_genomes_project 7 135736178 135771932 + MGP_NODShiLtJ_P0085865 Mfsd13b protein_coding protein_coding MGP_NODShiLtJ_T0085866.1 MGP_NODShiLtJ_G0032745.1 mouse_genomes_project 7 135736194 135745146 + MGP_NODShiLtJ_P0085866 Mfsd13b protein_coding protein_coding MGP_NODShiLtJ_T0085867.1 MGP_NODShiLtJ_G0032745.1 mouse_genomes_project 7 135736197 135742747 + MGP_NODShiLtJ_P0085867 Mfsd13b protein_coding protein_coding MGP_NODShiLtJ_T0085868.1 MGP_NODShiLtJ_G0032745.1 mouse_genomes_project 7 135745500 135771932 + MGP_NODShiLtJ_P0085868 Mfsd13b protein_coding protein_coding MGP_NODShiLtJ_T0085694.1 MGP_NODShiLtJ_G0032702.1 mouse_genomes_project 7 132537539 132551628 - MGP_NODShiLtJ_P0085694 Rps15a protein_coding protein_coding MGP_NODShiLtJ_T0085695.1 MGP_NODShiLtJ_G0032702.1 mouse_genomes_project 7 132537545 132550696 - MGP_NODShiLtJ_P0085695 Rps15a protein_coding protein_coding MGP_NODShiLtJ_T0085696.1 MGP_NODShiLtJ_G0032702.1 mouse_genomes_project 7 132544509 132551117 - MGP_NODShiLtJ_P0085696 Rps15a protein_coding protein_coding MGP_NODShiLtJ_T0085697.1 MGP_NODShiLtJ_G0032702.1 mouse_genomes_project 7 132544614 132550994 - MGP_NODShiLtJ_P0085697 Rps15a protein_coding protein_coding MGP_NODShiLtJ_T0085698.1 MGP_NODShiLtJ_G0032702.1 mouse_genomes_project 7 132545108 132550668 - Rps15a protein_coding retained_intron MGP_NODShiLtJ_T0085699.1 MGP_NODShiLtJ_G0032702.1 mouse_genomes_project 7 132545443 132551569 - MGP_NODShiLtJ_P0085699 Rps15a protein_coding protein_coding MGP_NODShiLtJ_T0085700.1 MGP_NODShiLtJ_G0032702.1 mouse_genomes_project 7 132550224 132551568 - MGP_NODShiLtJ_P0085700 Rps15a protein_coding protein_coding MGP_NODShiLtJ_T0081815.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24281761 24313628 + MGP_NODShiLtJ_P0081815 Xrcc1 protein_coding protein_coding MGP_NODShiLtJ_T0081816.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24282626 24313631 + MGP_NODShiLtJ_P0081816 Xrcc1 protein_coding protein_coding MGP_NODShiLtJ_T0081817.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24282674 24300748 + Xrcc1 protein_coding retained_intron MGP_NODShiLtJ_T0081818.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24282677 24287728 + Xrcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0081819.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24282757 24284045 + Xrcc1 protein_coding retained_intron MGP_NODShiLtJ_T0081820.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24282805 24307169 + Xrcc1 protein_coding retained_intron MGP_NODShiLtJ_T0081821.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24305795 24307770 + Xrcc1 protein_coding retained_intron MGP_NODShiLtJ_T0081822.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24307591 24310895 + Xrcc1 protein_coding retained_intron MGP_NODShiLtJ_T0081823.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24309929 24310913 + Xrcc1 protein_coding retained_intron MGP_NODShiLtJ_T0081824.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24310087 24311129 + Xrcc1 protein_coding retained_intron MGP_NODShiLtJ_T0081825.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24310764 24313633 + Xrcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0081826.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24311916 24313627 + Xrcc1 protein_coding retained_intron MGP_NODShiLtJ_T0081827.1 MGP_NODShiLtJ_G0031648.1 mouse_genomes_project 7 24312428 24313627 + Xrcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0082171.1 MGP_NODShiLtJ_G0031733.1 mouse_genomes_project 7 27973979 27977411 + MGP_NODShiLtJ_P0082171 Ttc9b protein_coding protein_coding MGP_NODShiLtJ_T0086000.1 MGP_NODShiLtJ_G0032776.1 mouse_genomes_project 7 140610487 140637845 + MGP_NODShiLtJ_P0086000 Il4ra protein_coding protein_coding MGP_NODShiLtJ_T0086001.1 MGP_NODShiLtJ_G0032776.1 mouse_genomes_project 7 140610638 140630652 + Il4ra protein_coding retained_intron MGP_NODShiLtJ_T0086002.1 MGP_NODShiLtJ_G0032776.1 mouse_genomes_project 7 140610638 140625589 + MGP_NODShiLtJ_P0086002 Il4ra protein_coding protein_coding MGP_NODShiLtJ_T0086003.1 MGP_NODShiLtJ_G0032776.1 mouse_genomes_project 7 140610643 140628369 + MGP_NODShiLtJ_P0086003 Il4ra protein_coding protein_coding MGP_NODShiLtJ_T0086004.1 MGP_NODShiLtJ_G0032776.1 mouse_genomes_project 7 140610654 140636338 + MGP_NODShiLtJ_P0086004 Il4ra protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085127.1 MGP_NODShiLtJ_G0032468.1 mouse_genomes_project 7 115718432 115719347 - MGP_NODShiLtJ_P0085127 protein_coding protein_coding MGP_NODShiLtJ_T0015732.1 MGP_NODShiLtJ_G0013840.1 mouse_genomes_project 7 88633537 88635068 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083349.1 MGP_NODShiLtJ_G0032009.1 mouse_genomes_project 7 47767840 47772956 + MGP_NODShiLtJ_P0083349 Irf3 protein_coding protein_coding MGP_NODShiLtJ_T0083350.1 MGP_NODShiLtJ_G0032009.1 mouse_genomes_project 7 47768141 47772498 + MGP_NODShiLtJ_P0083350 Irf3 protein_coding protein_coding MGP_NODShiLtJ_T0005189.1 MGP_NODShiLtJ_G0004406.1 mouse_genomes_project 7 92094548 92130696 - Gm16638 antisense antisense MGP_NODShiLtJ_T0086898.1 MGP_NODShiLtJ_G0032948.1 mouse_genomes_project 7 154269714 154464231 - MGP_NODShiLtJ_P0086898 Tcerg1l protein_coding protein_coding MGP_NODShiLtJ_T0086899.1 MGP_NODShiLtJ_G0032948.1 mouse_genomes_project 7 154270451 154327682 - Tcerg1l protein_coding processed_transcript MGP_NODShiLtJ_T0086900.1 MGP_NODShiLtJ_G0032948.1 mouse_genomes_project 7 154320300 154464233 - Tcerg1l protein_coding retained_intron MGP_NODShiLtJ_T0081187.1 MGP_NODShiLtJ_G0031435.1 mouse_genomes_project 7 8297706 8305872 - MGP_NODShiLtJ_P0081187 Zik1 protein_coding protein_coding MGP_NODShiLtJ_T0083539.1 MGP_NODShiLtJ_G0032061.1 mouse_genomes_project 7 48573069 48581347 + MGP_NODShiLtJ_P0083539 Fam83e protein_coding protein_coding MGP_NODShiLtJ_T0083540.1 MGP_NODShiLtJ_G0032061.1 mouse_genomes_project 7 48573077 48576717 + Fam83e protein_coding retained_intron MGP_NODShiLtJ_T0083542.1 MGP_NODShiLtJ_G0032061.1 mouse_genomes_project 7 48577710 48581344 + Fam83e protein_coding processed_transcript MGP_NODShiLtJ_T0081530.1 MGP_NODShiLtJ_G0031559.1 mouse_genomes_project 7 18324697 18334944 + MGP_NODShiLtJ_P0081530 Mypop protein_coding protein_coding MGP_NODShiLtJ_T0081531.1 MGP_NODShiLtJ_G0031559.1 mouse_genomes_project 7 18324771 18334946 + MGP_NODShiLtJ_P0081531 Mypop protein_coding protein_coding MGP_NODShiLtJ_T0081532.1 MGP_NODShiLtJ_G0031559.1 mouse_genomes_project 7 18325423 18326555 + Mypop protein_coding retained_intron MGP_NODShiLtJ_T0083128.1 MGP_NODShiLtJ_G0031958.1 mouse_genomes_project 7 46314068 46320517 + MGP_NODShiLtJ_P0083128 Klk14 protein_coding protein_coding MGP_NODShiLtJ_T0008924.1 MGP_NODShiLtJ_G0007182.1 mouse_genomes_project 7 136040106 136078550 + Gm45079 lincRNA lincRNA MGP_NODShiLtJ_T0081813.1 MGP_NODShiLtJ_G0031646.1 mouse_genomes_project 7 24265570 24273446 + MGP_NODShiLtJ_P0081813 Irgq protein_coding protein_coding MGP_NODShiLtJ_T0082819.1 MGP_NODShiLtJ_G0031879.1 mouse_genomes_project 7 32053163 32054466 - MGP_NODShiLtJ_P0082819 Scgb1b2 protein_coding protein_coding MGP_NODShiLtJ_T0102130.1 MGP_NODShiLtJ_G0040296.1 mouse_genomes_project 7 44758744 44759641 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102178.1 MGP_NODShiLtJ_G0040344.1 mouse_genomes_project 7 95073097 95074382 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008916.1 MGP_NODShiLtJ_G0007177.1 mouse_genomes_project 7 129215105 129248613 + Gm44944 lincRNA lincRNA MGP_NODShiLtJ_T0008917.1 MGP_NODShiLtJ_G0007177.1 mouse_genomes_project 7 129247187 129248902 + Gm44944 lincRNA lincRNA MGP_NODShiLtJ_T0008918.1 MGP_NODShiLtJ_G0007177.1 mouse_genomes_project 7 129248626 129248931 + Gm44944 lincRNA lincRNA MGP_NODShiLtJ_T0085163.1 MGP_NODShiLtJ_G0032502.1 mouse_genomes_project 7 116566349 116567294 - MGP_NODShiLtJ_P0085163 Olfr642 protein_coding protein_coding MGP_NODShiLtJ_T0081054.1 MGP_NODShiLtJ_G0031370.1 mouse_genomes_project 7 1881280 1905159 - MGP_NODShiLtJ_P0081054 Fam71e2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081055.1 MGP_NODShiLtJ_G0031370.1 mouse_genomes_project 7 1881283 1905159 - MGP_NODShiLtJ_P0081055 Fam71e2 protein_coding protein_coding MGP_NODShiLtJ_T0084293.1 MGP_NODShiLtJ_G0032229.1 mouse_genomes_project 7 88543850 88546078 + MGP_NODShiLtJ_P0084293 Hddc3 protein_coding protein_coding MGP_NODShiLtJ_T0084294.1 MGP_NODShiLtJ_G0032229.1 mouse_genomes_project 7 88543862 88544726 + MGP_NODShiLtJ_P0084294 Hddc3 protein_coding protein_coding MGP_NODShiLtJ_T0084295.1 MGP_NODShiLtJ_G0032229.1 mouse_genomes_project 7 88544312 88545128 + MGP_NODShiLtJ_P0084295 Hddc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084296.1 MGP_NODShiLtJ_G0032229.1 mouse_genomes_project 7 88544525 88549958 + MGP_NODShiLtJ_P0084296 Hddc3 protein_coding protein_coding MGP_NODShiLtJ_T0002222.1 MGP_NODShiLtJ_G0002133.1 mouse_genomes_project 7 86229010 86231795 - TEC TEC MGP_NODShiLtJ_T0008812.1 MGP_NODShiLtJ_G0007111.1 mouse_genomes_project 7 74991515 75004889 - Gm16157 lincRNA lincRNA MGP_NODShiLtJ_T0008813.1 MGP_NODShiLtJ_G0007111.1 mouse_genomes_project 7 74992128 75006705 - Gm16157 lincRNA lincRNA MGP_NODShiLtJ_T0087032.1 MGP_NODShiLtJ_G0032990.1 mouse_genomes_project 7 156844936 156845840 + MGP_NODShiLtJ_P0087032 protein_coding protein_coding MGP_NODShiLtJ_T0081026.1 MGP_NODShiLtJ_G0031366.1 mouse_genomes_project 7 1811134 1840590 + MGP_NODShiLtJ_P0081026 Brsk1 protein_coding protein_coding MGP_NODShiLtJ_T0081027.1 MGP_NODShiLtJ_G0031366.1 mouse_genomes_project 7 1812795 1840606 + MGP_NODShiLtJ_P0081027 Brsk1 protein_coding protein_coding MGP_NODShiLtJ_T0081028.1 MGP_NODShiLtJ_G0031366.1 mouse_genomes_project 7 1812947 1830014 + MGP_NODShiLtJ_P0081028 Brsk1 protein_coding protein_coding MGP_NODShiLtJ_T0081029.1 MGP_NODShiLtJ_G0031366.1 mouse_genomes_project 7 1814150 1830014 + MGP_NODShiLtJ_P0081029 Brsk1 protein_coding protein_coding MGP_NODShiLtJ_T0081031.1 MGP_NODShiLtJ_G0031366.1 mouse_genomes_project 7 1833573 1835546 + MGP_NODShiLtJ_P0081031 Brsk1 protein_coding protein_coding MGP_NODShiLtJ_T0085406.1 MGP_NODShiLtJ_G0032626.1 mouse_genomes_project 7 121901220 121902212 + MGP_NODShiLtJ_P0085406 protein_coding protein_coding MGP_NODShiLtJ_T0080833.1 MGP_NODShiLtJ_G0031332.1 mouse_genomes_project 7 537203 543532 - MGP_NODShiLtJ_P0080833 Oscar protein_coding protein_coding MGP_NODShiLtJ_T0080834.1 MGP_NODShiLtJ_G0031332.1 mouse_genomes_project 7 537203 543556 - MGP_NODShiLtJ_P0080834 Oscar protein_coding protein_coding MGP_NODShiLtJ_T0080835.1 MGP_NODShiLtJ_G0031332.1 mouse_genomes_project 7 537203 543556 - MGP_NODShiLtJ_P0080835 Oscar protein_coding protein_coding MGP_NODShiLtJ_T0080836.1 MGP_NODShiLtJ_G0031332.1 mouse_genomes_project 7 538561 543484 - Oscar protein_coding processed_transcript MGP_NODShiLtJ_T0015721.1 MGP_NODShiLtJ_G0013829.1 mouse_genomes_project 7 81091818 81092184 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081614.1 MGP_NODShiLtJ_G0031580.1 mouse_genomes_project 7 18744306 18746935 - MGP_NODShiLtJ_P0081614 Cd3eap protein_coding protein_coding MGP_NODShiLtJ_T0081615.1 MGP_NODShiLtJ_G0031580.1 mouse_genomes_project 7 18746291 18746937 - Cd3eap protein_coding retained_intron MGP_NODShiLtJ_T0102148.1 MGP_NODShiLtJ_G0040314.1 mouse_genomes_project 7 50971311 50972099 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085397.1 MGP_NODShiLtJ_G0032617.1 mouse_genomes_project 7 121476705 121477644 + MGP_NODShiLtJ_P0085397 Olfr481 protein_coding protein_coding MGP_NODShiLtJ_T0083897.1 MGP_NODShiLtJ_G0032156.1 mouse_genomes_project 7 70943764 71206651 + MGP_NODShiLtJ_P0083897 Apba2 protein_coding protein_coding MGP_NODShiLtJ_T0083898.1 MGP_NODShiLtJ_G0032156.1 mouse_genomes_project 7 70944007 71145731 + MGP_NODShiLtJ_P0083898 Apba2 protein_coding protein_coding MGP_NODShiLtJ_T0083899.1 MGP_NODShiLtJ_G0032156.1 mouse_genomes_project 7 70944196 71145795 + MGP_NODShiLtJ_P0083899 Apba2 protein_coding protein_coding MGP_NODShiLtJ_T0083900.1 MGP_NODShiLtJ_G0032156.1 mouse_genomes_project 7 71079316 71206631 + MGP_NODShiLtJ_P0083900 Apba2 protein_coding protein_coding MGP_NODShiLtJ_T0083901.1 MGP_NODShiLtJ_G0032156.1 mouse_genomes_project 7 71179551 71196036 + Apba2 protein_coding processed_transcript MGP_NODShiLtJ_T0083902.1 MGP_NODShiLtJ_G0032156.1 mouse_genomes_project 7 71195356 71206151 + Apba2 protein_coding processed_transcript MGP_NODShiLtJ_T0083903.1 MGP_NODShiLtJ_G0032156.1 mouse_genomes_project 7 71196100 71206182 + MGP_NODShiLtJ_P0083903 Apba2 protein_coding protein_coding MGP_NODShiLtJ_T0011574.1 MGP_NODShiLtJ_G0009707.1 mouse_genomes_project 7 42065838 42066110 + Gm24910 misc_RNA misc_RNA MGP_NODShiLtJ_T0085394.1 MGP_NODShiLtJ_G0032614.1 mouse_genomes_project 7 121411677 121412622 - MGP_NODShiLtJ_P0085394 Olfr478 protein_coding protein_coding MGP_NODShiLtJ_T0081184.1 MGP_NODShiLtJ_G0031432.1 mouse_genomes_project 7 7747128 7768715 - MGP_NODShiLtJ_P0081184 protein_coding protein_coding MGP_NODShiLtJ_T0098085.1 MGP_NODShiLtJ_G0036497.1 mouse_genomes_project 7 130972427 130972548 - n-R5s157 rRNA rRNA MGP_NODShiLtJ_T0085108.1 MGP_NODShiLtJ_G0032450.1 mouse_genomes_project 7 115238885 115242709 + MGP_NODShiLtJ_P0085108 protein_coding protein_coding MGP_NODShiLtJ_T0085040.1 MGP_NODShiLtJ_G0032411.1 mouse_genomes_project 7 114188427 114198978 + MGP_NODShiLtJ_P0085040 Art1 protein_coding protein_coding MGP_NODShiLtJ_T0010835.1 MGP_NODShiLtJ_G0008968.1 mouse_genomes_project 7 160506497 160506591 + Mir6404 miRNA miRNA MGP_NODShiLtJ_T0005262.1 MGP_NODShiLtJ_G0004457.1 mouse_genomes_project 7 160965197 161008930 - Gm14372 antisense antisense MGP_NODShiLtJ_T0082648.1 MGP_NODShiLtJ_G0031849.1 mouse_genomes_project 7 31301058 31303322 - MGP_NODShiLtJ_P0082648 Etv2 protein_coding protein_coding MGP_NODShiLtJ_T0085718.1 MGP_NODShiLtJ_G0032707.1 mouse_genomes_project 7 132982617 133006272 - MGP_NODShiLtJ_P0085718 Coq7 protein_coding protein_coding MGP_NODShiLtJ_T0085719.1 MGP_NODShiLtJ_G0032707.1 mouse_genomes_project 7 132998032 133006327 - MGP_NODShiLtJ_P0085719 Coq7 protein_coding protein_coding MGP_NODShiLtJ_T0085720.1 MGP_NODShiLtJ_G0032707.1 mouse_genomes_project 7 132999774 133006285 - Coq7 protein_coding retained_intron MGP_NODShiLtJ_T0018198.1 MGP_NODShiLtJ_G0015533.1 mouse_genomes_project 7 48169380 48171166 + Mtag2 processed_transcript processed_transcript MGP_NODShiLtJ_T0018199.1 MGP_NODShiLtJ_G0015533.1 mouse_genomes_project 7 48170450 48171166 + Mtag2 processed_transcript pseudogene MGP_NODShiLtJ_T0082677.1 MGP_NODShiLtJ_G0031858.1 mouse_genomes_project 7 31445752 31464296 + MGP_NODShiLtJ_P0082677 Dmkn protein_coding protein_coding MGP_NODShiLtJ_T0082678.1 MGP_NODShiLtJ_G0031858.1 mouse_genomes_project 7 31445759 31464295 + MGP_NODShiLtJ_P0082678 Dmkn protein_coding protein_coding MGP_NODShiLtJ_T0082679.1 MGP_NODShiLtJ_G0031858.1 mouse_genomes_project 7 31445759 31464295 + MGP_NODShiLtJ_P0082679 Dmkn protein_coding protein_coding MGP_NODShiLtJ_T0082680.1 MGP_NODShiLtJ_G0031858.1 mouse_genomes_project 7 31445795 31464295 + MGP_NODShiLtJ_P0082680 Dmkn protein_coding protein_coding MGP_NODShiLtJ_T0082681.1 MGP_NODShiLtJ_G0031858.1 mouse_genomes_project 7 31447053 31464041 + MGP_NODShiLtJ_P0082681 Dmkn protein_coding protein_coding MGP_NODShiLtJ_T0082682.1 MGP_NODShiLtJ_G0031858.1 mouse_genomes_project 7 31459712 31464300 + MGP_NODShiLtJ_P0082682 Dmkn protein_coding protein_coding MGP_NODShiLtJ_T0081783.1 MGP_NODShiLtJ_G0031639.1 mouse_genomes_project 7 24070727 24077037 + MGP_NODShiLtJ_P0081783 Lypd5 protein_coding protein_coding MGP_NODShiLtJ_T0082915.1 MGP_NODShiLtJ_G0031903.1 mouse_genomes_project 7 36578624 36648144 + MGP_NODShiLtJ_P0082915 Rhpn2 protein_coding protein_coding MGP_NODShiLtJ_T0082916.1 MGP_NODShiLtJ_G0031903.1 mouse_genomes_project 7 36578784 36648140 + MGP_NODShiLtJ_P0082916 Rhpn2 protein_coding protein_coding MGP_NODShiLtJ_T0082917.1 MGP_NODShiLtJ_G0031903.1 mouse_genomes_project 7 36634811 36637193 + Rhpn2 protein_coding retained_intron MGP_NODShiLtJ_T0082918.1 MGP_NODShiLtJ_G0031903.1 mouse_genomes_project 7 36638093 36640902 + Rhpn2 protein_coding retained_intron MGP_NODShiLtJ_T0081483.1 MGP_NODShiLtJ_G0031535.1 mouse_genomes_project 7 15979152 16014959 - MGP_NODShiLtJ_P0081483 Hif3a protein_coding protein_coding MGP_NODShiLtJ_T0081484.1 MGP_NODShiLtJ_G0031535.1 mouse_genomes_project 7 15983379 16007688 - MGP_NODShiLtJ_P0081484 Hif3a protein_coding protein_coding MGP_NODShiLtJ_T0081485.1 MGP_NODShiLtJ_G0031535.1 mouse_genomes_project 7 15997228 15998962 - MGP_NODShiLtJ_P0081485 Hif3a protein_coding protein_coding MGP_NODShiLtJ_T0081486.1 MGP_NODShiLtJ_G0031535.1 mouse_genomes_project 7 16001959 16014916 - MGP_NODShiLtJ_P0081486 Hif3a protein_coding protein_coding MGP_NODShiLtJ_T0083598.1 MGP_NODShiLtJ_G0032076.1 mouse_genomes_project 7 48999751 49000924 - MGP_NODShiLtJ_P0083598 Kcnj11 protein_coding protein_coding MGP_NODShiLtJ_T0083509.1 MGP_NODShiLtJ_G0032052.1 mouse_genomes_project 7 48470000 48481598 + MGP_NODShiLtJ_P0083509 Rasip1 protein_coding protein_coding MGP_NODShiLtJ_T0086637.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143784201 143820090 - MGP_NODShiLtJ_P0086637 Tial1 protein_coding protein_coding MGP_NODShiLtJ_T0086638.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143784649 143820070 - Tial1 protein_coding retained_intron MGP_NODShiLtJ_T0086639.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143785826 143820091 - MGP_NODShiLtJ_P0086639 Tial1 protein_coding protein_coding MGP_NODShiLtJ_T0086640.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143786218 143819741 - MGP_NODShiLtJ_P0086640 Tial1 protein_coding protein_coding MGP_NODShiLtJ_T0086641.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143786632 143789329 - MGP_NODShiLtJ_P0086641 Tial1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086642.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143786703 143819627 - MGP_NODShiLtJ_P0086642 Tial1 protein_coding protein_coding MGP_NODShiLtJ_T0086643.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143786703 143819773 - MGP_NODShiLtJ_P0086643 Tial1 protein_coding protein_coding MGP_NODShiLtJ_T0086644.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143786703 143820135 - MGP_NODShiLtJ_P0086644 Tial1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086645.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143786734 143819764 - MGP_NODShiLtJ_P0086645 Tial1 protein_coding protein_coding MGP_NODShiLtJ_T0086646.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143788237 143793246 - MGP_NODShiLtJ_P0086646 Tial1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086647.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143788712 143790129 - Tial1 protein_coding retained_intron MGP_NODShiLtJ_T0086648.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143789235 143799930 - MGP_NODShiLtJ_P0086648 Tial1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086649.1 MGP_NODShiLtJ_G0032890.1 mouse_genomes_project 7 143792747 143793778 - Tial1 protein_coding retained_intron MGP_NODShiLtJ_T0087132.1 MGP_NODShiLtJ_G0033023.1 mouse_genomes_project 7 157530295 157534333 - MGP_NODShiLtJ_P0087132 Lmntd2 protein_coding protein_coding MGP_NODShiLtJ_T0087133.1 MGP_NODShiLtJ_G0033023.1 mouse_genomes_project 7 157530295 157534335 - MGP_NODShiLtJ_P0087133 Lmntd2 protein_coding protein_coding MGP_NODShiLtJ_T0008741.1 MGP_NODShiLtJ_G0007054.1 mouse_genomes_project 7 25754763 25758764 + Gm26707 lincRNA lincRNA MGP_NODShiLtJ_T0086962.1 MGP_NODShiLtJ_G0032961.1 mouse_genomes_project 7 156044797 156074948 + MGP_NODShiLtJ_P0086962 Kndc1 protein_coding protein_coding MGP_NODShiLtJ_T0086963.1 MGP_NODShiLtJ_G0032961.1 mouse_genomes_project 7 156044797 156092710 + MGP_NODShiLtJ_P0086963 Kndc1 protein_coding protein_coding MGP_NODShiLtJ_T0086964.1 MGP_NODShiLtJ_G0032961.1 mouse_genomes_project 7 156044940 156065683 + MGP_NODShiLtJ_P0086964 Kndc1 protein_coding protein_coding MGP_NODShiLtJ_T0086965.1 MGP_NODShiLtJ_G0032961.1 mouse_genomes_project 7 156074723 156092710 + Kndc1 protein_coding retained_intron MGP_NODShiLtJ_T0010740.1 MGP_NODShiLtJ_G0008873.1 mouse_genomes_project 7 24810947 24811011 - Mir7047 miRNA miRNA MGP_NODShiLtJ_T0015600.1 MGP_NODShiLtJ_G0013708.1 mouse_genomes_project 7 18147692 18148262 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087270.1 MGP_NODShiLtJ_G0033044.1 mouse_genomes_project 7 157831545 157883271 - MGP_NODShiLtJ_P0087270 Chid1 protein_coding protein_coding MGP_NODShiLtJ_T0087271.1 MGP_NODShiLtJ_G0033044.1 mouse_genomes_project 7 157833805 157883233 - Chid1 protein_coding retained_intron MGP_NODShiLtJ_T0087272.1 MGP_NODShiLtJ_G0033044.1 mouse_genomes_project 7 157834456 157876358 - MGP_NODShiLtJ_P0087272 Chid1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087273.1 MGP_NODShiLtJ_G0033044.1 mouse_genomes_project 7 157834456 157883283 - MGP_NODShiLtJ_P0087273 Chid1 protein_coding protein_coding MGP_NODShiLtJ_T0087274.1 MGP_NODShiLtJ_G0033044.1 mouse_genomes_project 7 157853568 157868167 - Chid1 protein_coding processed_transcript MGP_NODShiLtJ_T0087275.1 MGP_NODShiLtJ_G0033044.1 mouse_genomes_project 7 157857114 157882944 - MGP_NODShiLtJ_P0087275 Chid1 protein_coding protein_coding MGP_NODShiLtJ_T0087276.1 MGP_NODShiLtJ_G0033044.1 mouse_genomes_project 7 157875330 157883246 - Chid1 protein_coding retained_intron MGP_NODShiLtJ_T0085852.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135587105 135658275 + MGP_NODShiLtJ_P0085852 Eef2k protein_coding protein_coding MGP_NODShiLtJ_T0085853.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135587874 135655066 + MGP_NODShiLtJ_P0085853 Eef2k protein_coding protein_coding MGP_NODShiLtJ_T0085854.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135587892 135607379 + MGP_NODShiLtJ_P0085854 Eef2k protein_coding protein_coding MGP_NODShiLtJ_T0085855.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135599980 135651450 + MGP_NODShiLtJ_P0085855 Eef2k protein_coding protein_coding MGP_NODShiLtJ_T0085856.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135599980 135631420 + MGP_NODShiLtJ_P0085856 Eef2k protein_coding protein_coding MGP_NODShiLtJ_T0085857.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135599992 135654568 + MGP_NODShiLtJ_P0085857 Eef2k protein_coding protein_coding MGP_NODShiLtJ_T0085858.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135626295 135630939 + Eef2k protein_coding retained_intron MGP_NODShiLtJ_T0085859.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135640762 135646398 + MGP_NODShiLtJ_P0085859 Eef2k protein_coding protein_coding MGP_NODShiLtJ_T0085860.1 MGP_NODShiLtJ_G0032742.1 mouse_genomes_project 7 135642932 135654650 + Eef2k protein_coding processed_transcript MGP_NODShiLtJ_T0084772.1 MGP_NODShiLtJ_G0032355.1 mouse_genomes_project 7 111069194 111138057 + MGP_NODShiLtJ_P0084772 Map6 protein_coding protein_coding MGP_NODShiLtJ_T0084773.1 MGP_NODShiLtJ_G0032355.1 mouse_genomes_project 7 111069194 111138057 + MGP_NODShiLtJ_P0084773 Map6 protein_coding protein_coding MGP_NODShiLtJ_T0084774.1 MGP_NODShiLtJ_G0032355.1 mouse_genomes_project 7 111069236 111120408 + Map6 protein_coding retained_intron MGP_NODShiLtJ_T0084775.1 MGP_NODShiLtJ_G0032355.1 mouse_genomes_project 7 111070093 111138058 + MGP_NODShiLtJ_P0084775 Map6 protein_coding protein_coding MGP_NODShiLtJ_T0084776.1 MGP_NODShiLtJ_G0032355.1 mouse_genomes_project 7 111121255 111122511 + Map6 protein_coding processed_transcript MGP_NODShiLtJ_T0087462.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160081032 160126482 - MGP_NODShiLtJ_P0087462 Cars protein_coding protein_coding MGP_NODShiLtJ_T0087463.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160081509 160126448 - MGP_NODShiLtJ_P0087463 Cars protein_coding protein_coding MGP_NODShiLtJ_T0087464.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160085549 160092102 - Cars protein_coding processed_transcript MGP_NODShiLtJ_T0087465.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160088395 160092868 - Cars protein_coding retained_intron MGP_NODShiLtJ_T0087466.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160092678 160093945 - Cars protein_coding processed_transcript MGP_NODShiLtJ_T0087467.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160093793 160098359 - Cars protein_coding retained_intron MGP_NODShiLtJ_T0087468.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160110657 160123087 - Cars protein_coding processed_transcript MGP_NODShiLtJ_T0087469.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160112058 160126073 - Cars protein_coding processed_transcript MGP_NODShiLtJ_T0087470.1 MGP_NODShiLtJ_G0033082.1 mouse_genomes_project 7 160117333 160126423 - Cars protein_coding processed_transcript MGP_NODShiLtJ_T0087033.1 MGP_NODShiLtJ_G0032991.1 mouse_genomes_project 7 156865403 156866339 + MGP_NODShiLtJ_P0087033 Olfr61 protein_coding protein_coding MGP_NODShiLtJ_T0081413.1 MGP_NODShiLtJ_G0031519.1 mouse_genomes_project 7 15375263 15501568 - MGP_NODShiLtJ_P0081413 Arhgap35 protein_coding protein_coding MGP_NODShiLtJ_T0081414.1 MGP_NODShiLtJ_G0031519.1 mouse_genomes_project 7 15377784 15502727 - MGP_NODShiLtJ_P0081414 Arhgap35 protein_coding protein_coding MGP_NODShiLtJ_T0005579.1 MGP_NODShiLtJ_G0004693.1 mouse_genomes_project 7 130761846 130763087 + AV356131 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0081321.1 MGP_NODShiLtJ_G0031488.1 mouse_genomes_project 7 12793573 12829637 - MGP_NODShiLtJ_P0081321 Sult2a6 protein_coding protein_coding MGP_NODShiLtJ_T0081322.1 MGP_NODShiLtJ_G0031488.1 mouse_genomes_project 7 12793581 12829637 - MGP_NODShiLtJ_P0081322 Sult2a6 protein_coding protein_coding MGP_NODShiLtJ_T0082309.1 MGP_NODShiLtJ_G0031776.1 mouse_genomes_project 7 29268295 29288453 + MGP_NODShiLtJ_P0082309 Rinl protein_coding protein_coding MGP_NODShiLtJ_T0005203.1 MGP_NODShiLtJ_G0004416.1 mouse_genomes_project 7 109312452 109373066 - Rsf1os2 antisense antisense MGP_NODShiLtJ_T0005204.1 MGP_NODShiLtJ_G0004416.1 mouse_genomes_project 7 109369948 109373144 - Rsf1os2 antisense antisense MGP_NODShiLtJ_T0005205.1 MGP_NODShiLtJ_G0004416.1 mouse_genomes_project 7 109372405 109373351 - Rsf1os2 antisense antisense MGP_NODShiLtJ_T0083910.1 MGP_NODShiLtJ_G0032159.1 mouse_genomes_project 7 71784351 71862092 - MGP_NODShiLtJ_P0083910 Tjp1 protein_coding protein_coding MGP_NODShiLtJ_T0083911.1 MGP_NODShiLtJ_G0032159.1 mouse_genomes_project 7 71784894 71861868 - MGP_NODShiLtJ_P0083911 Tjp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083912.1 MGP_NODShiLtJ_G0032159.1 mouse_genomes_project 7 71784894 71861868 - MGP_NODShiLtJ_P0083912 Tjp1 protein_coding protein_coding MGP_NODShiLtJ_T0083913.1 MGP_NODShiLtJ_G0032159.1 mouse_genomes_project 7 71785690 71790490 - Tjp1 protein_coding processed_transcript MGP_NODShiLtJ_T0083914.1 MGP_NODShiLtJ_G0032159.1 mouse_genomes_project 7 71830722 71833297 - Tjp1 protein_coding retained_intron MGP_NODShiLtJ_T0083915.1 MGP_NODShiLtJ_G0032159.1 mouse_genomes_project 7 71833116 72048939 - MGP_NODShiLtJ_P0083915 Tjp1 protein_coding protein_coding MGP_NODShiLtJ_T0083916.1 MGP_NODShiLtJ_G0032159.1 mouse_genomes_project 7 72034340 72049024 - Tjp1 protein_coding retained_intron MGP_NODShiLtJ_T0002239.1 MGP_NODShiLtJ_G0002150.1 mouse_genomes_project 7 103326965 103327284 + TEC TEC MGP_NODShiLtJ_T0085815.1 MGP_NODShiLtJ_G0032730.1 mouse_genomes_project 7 134516045 134703564 - MGP_NODShiLtJ_P0085815 Dnah3 protein_coding protein_coding MGP_NODShiLtJ_T0085816.1 MGP_NODShiLtJ_G0032730.1 mouse_genomes_project 7 134516045 134703564 - MGP_NODShiLtJ_P0085816 Dnah3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010797.1 MGP_NODShiLtJ_G0008930.1 mouse_genomes_project 7 87610079 87610169 + Mir9-3 miRNA miRNA MGP_NODShiLtJ_T0080830.1 MGP_NODShiLtJ_G0031331.1 mouse_genomes_project 7 447555 466046 - MGP_NODShiLtJ_P0080830 Tarm1 protein_coding protein_coding MGP_NODShiLtJ_T0080831.1 MGP_NODShiLtJ_G0031331.1 mouse_genomes_project 7 449573 466112 - MGP_NODShiLtJ_P0080831 Tarm1 protein_coding protein_coding MGP_NODShiLtJ_T0080832.1 MGP_NODShiLtJ_G0031331.1 mouse_genomes_project 7 450767 466006 - MGP_NODShiLtJ_P0080832 Tarm1 protein_coding protein_coding MGP_NODShiLtJ_T0099507.1 MGP_NODShiLtJ_G0037901.1 mouse_genomes_project 7 116942575 116942683 - Gm24846 snRNA snRNA MGP_NODShiLtJ_T0084026.1 MGP_NODShiLtJ_G0032178.1 mouse_genomes_project 7 74415122 74447595 - MGP_NODShiLtJ_P0084026 Synm protein_coding protein_coding MGP_NODShiLtJ_T0084027.1 MGP_NODShiLtJ_G0032178.1 mouse_genomes_project 7 74415122 74447595 - MGP_NODShiLtJ_P0084027 Synm protein_coding protein_coding MGP_NODShiLtJ_T0085403.1 MGP_NODShiLtJ_G0032623.1 mouse_genomes_project 7 121787328 121788261 + MGP_NODShiLtJ_P0085403 Olfr491 protein_coding protein_coding MGP_NODShiLtJ_T0018184.1 MGP_NODShiLtJ_G0015528.1 mouse_genomes_project 7 44913528 44934320 - processed_transcript lincRNA MGP_NODShiLtJ_T0087545.1 MGP_NODShiLtJ_G0033102.1 mouse_genomes_project 7 161909498 161940974 - MGP_NODShiLtJ_P0087545 Tpcn2 protein_coding protein_coding MGP_NODShiLtJ_T0085158.1 MGP_NODShiLtJ_G0032497.1 mouse_genomes_project 7 116427471 116428410 + MGP_NODShiLtJ_P0085158 Olfr633 protein_coding protein_coding MGP_NODShiLtJ_T0008963.1 MGP_NODShiLtJ_G0007208.1 mouse_genomes_project 7 146006639 146009850 + lincRNA lincRNA MGP_NODShiLtJ_T0085811.1 MGP_NODShiLtJ_G0032729.1 mouse_genomes_project 7 134487551 134510101 + MGP_NODShiLtJ_P0085811 Lyrm1 protein_coding protein_coding MGP_NODShiLtJ_T0085812.1 MGP_NODShiLtJ_G0032729.1 mouse_genomes_project 7 134487557 134509632 + MGP_NODShiLtJ_P0085812 Lyrm1 protein_coding protein_coding MGP_NODShiLtJ_T0085813.1 MGP_NODShiLtJ_G0032729.1 mouse_genomes_project 7 134487982 134510097 + MGP_NODShiLtJ_P0085813 Lyrm1 protein_coding protein_coding MGP_NODShiLtJ_T0085814.1 MGP_NODShiLtJ_G0032729.1 mouse_genomes_project 7 134491798 134510103 + MGP_NODShiLtJ_P0085814 Lyrm1 protein_coding protein_coding MGP_NODShiLtJ_T0099524.1 MGP_NODShiLtJ_G0037918.1 mouse_genomes_project 7 142082519 142082626 - Gm23445 snRNA snRNA MGP_NODShiLtJ_T0015739.1 MGP_NODShiLtJ_G0013847.1 mouse_genomes_project 7 93538286 93539411 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081147.1 MGP_NODShiLtJ_G0031411.1 mouse_genomes_project 7 3693849 3709401 - MGP_NODShiLtJ_P0081147 Zfp583 protein_coding protein_coding MGP_NODShiLtJ_T0081148.1 MGP_NODShiLtJ_G0031411.1 mouse_genomes_project 7 3694476 3708550 - MGP_NODShiLtJ_P0081148 Zfp583 protein_coding protein_coding MGP_NODShiLtJ_T0081149.1 MGP_NODShiLtJ_G0031411.1 mouse_genomes_project 7 3694505 3707379 - MGP_NODShiLtJ_P0081149 Zfp583 protein_coding protein_coding MGP_NODShiLtJ_T0081150.1 MGP_NODShiLtJ_G0031411.1 mouse_genomes_project 7 3695829 3709366 - Zfp583 protein_coding processed_transcript MGP_NODShiLtJ_T0081151.1 MGP_NODShiLtJ_G0031411.1 mouse_genomes_project 7 3701309 3709320 - Zfp583 protein_coding processed_transcript MGP_NODShiLtJ_T0081152.1 MGP_NODShiLtJ_G0031411.1 mouse_genomes_project 7 3701763 3709394 - MGP_NODShiLtJ_P0081152 Zfp583 protein_coding protein_coding MGP_NODShiLtJ_T0002178.1 MGP_NODShiLtJ_G0002090.1 mouse_genomes_project 7 46346522 46346956 + TEC TEC MGP_NODShiLtJ_T0015554.1 MGP_NODShiLtJ_G0013662.1 mouse_genomes_project 7 993177 993576 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082782.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31820214 31828725 - MGP_NODShiLtJ_P0082782 Fxyd3 protein_coding protein_coding MGP_NODShiLtJ_T0082783.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31822575 31824320 - Fxyd3 protein_coding retained_intron MGP_NODShiLtJ_T0082784.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31822577 31828676 - Fxyd3 protein_coding retained_intron MGP_NODShiLtJ_T0082785.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31822577 31823079 - Fxyd3 protein_coding retained_intron MGP_NODShiLtJ_T0082786.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31822577 31823493 - Fxyd3 protein_coding retained_intron MGP_NODShiLtJ_T0082787.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31822578 31828690 - MGP_NODShiLtJ_P0082787 Fxyd3 protein_coding protein_coding MGP_NODShiLtJ_T0082788.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31822579 31824082 - Fxyd3 protein_coding retained_intron MGP_NODShiLtJ_T0082789.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31822924 31826968 - MGP_NODShiLtJ_P0082789 Fxyd3 protein_coding protein_coding MGP_NODShiLtJ_T0082790.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31823570 31828675 - Fxyd3 protein_coding retained_intron MGP_NODShiLtJ_T0082791.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31824046 31828666 - Fxyd3 protein_coding retained_intron MGP_NODShiLtJ_T0082792.1 MGP_NODShiLtJ_G0031874.1 mouse_genomes_project 7 31825049 31828684 - Fxyd3 protein_coding retained_intron MGP_NODShiLtJ_T0008750.1 MGP_NODShiLtJ_G0007063.1 mouse_genomes_project 7 35349353 35353093 - Gm12762 lincRNA lincRNA MGP_NODShiLtJ_T0081730.1 MGP_NODShiLtJ_G0031616.1 mouse_genomes_project 7 23085584 23086584 - MGP_NODShiLtJ_P0081730 protein_coding protein_coding MGP_NODShiLtJ_T0081571.1 MGP_NODShiLtJ_G0031568.1 mouse_genomes_project 7 18476390 18498375 + MGP_NODShiLtJ_P0081571 Fbxo46 protein_coding protein_coding MGP_NODShiLtJ_T0081572.1 MGP_NODShiLtJ_G0031568.1 mouse_genomes_project 7 18489920 18495991 + MGP_NODShiLtJ_P0081572 Fbxo46 protein_coding protein_coding MGP_NODShiLtJ_T0008894.1 MGP_NODShiLtJ_G0007165.1 mouse_genomes_project 7 111059535 111068967 - Gm26705 lincRNA lincRNA MGP_NODShiLtJ_T0102210.1 MGP_NODShiLtJ_G0040376.1 mouse_genomes_project 7 118823312 119770896 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083680.1 MGP_NODShiLtJ_G0032099.1 mouse_genomes_project 7 50167979 50204310 - MGP_NODShiLtJ_P0083680 Mrgpra6 protein_coding protein_coding MGP_NODShiLtJ_T0087293.1 MGP_NODShiLtJ_G0033050.1 mouse_genomes_project 7 158229798 158257389 - MGP_NODShiLtJ_P0087293 Tollip protein_coding protein_coding MGP_NODShiLtJ_T0087294.1 MGP_NODShiLtJ_G0033050.1 mouse_genomes_project 7 158234676 158257282 - MGP_NODShiLtJ_P0087294 Tollip protein_coding protein_coding MGP_NODShiLtJ_T0087295.1 MGP_NODShiLtJ_G0033050.1 mouse_genomes_project 7 158246962 158257397 - MGP_NODShiLtJ_P0087295 Tollip protein_coding protein_coding MGP_NODShiLtJ_T0083599.1 MGP_NODShiLtJ_G0032077.1 mouse_genomes_project 7 49005494 49084567 - MGP_NODShiLtJ_P0083599 Abcc8 protein_coding protein_coding MGP_NODShiLtJ_T0081511.1 MGP_NODShiLtJ_G0031553.1 mouse_genomes_project 7 18155741 18176585 + MGP_NODShiLtJ_P0081511 Mill2 protein_coding protein_coding MGP_NODShiLtJ_T0081512.1 MGP_NODShiLtJ_G0031553.1 mouse_genomes_project 7 18155741 18176585 + MGP_NODShiLtJ_P0081512 Mill2 protein_coding protein_coding MGP_NODShiLtJ_T0081513.1 MGP_NODShiLtJ_G0031553.1 mouse_genomes_project 7 18155764 18181277 + MGP_NODShiLtJ_P0081513 Mill2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081514.1 MGP_NODShiLtJ_G0031553.1 mouse_genomes_project 7 18155776 18174227 + Mill2 protein_coding processed_transcript MGP_NODShiLtJ_T0084537.1 MGP_NODShiLtJ_G0032300.1 mouse_genomes_project 7 97524099 98205314 + MGP_NODShiLtJ_P0084537 Grm5 protein_coding protein_coding MGP_NODShiLtJ_T0084538.1 MGP_NODShiLtJ_G0032300.1 mouse_genomes_project 7 97549082 98202812 + MGP_NODShiLtJ_P0084538 Grm5 protein_coding protein_coding MGP_NODShiLtJ_T0084539.1 MGP_NODShiLtJ_G0032300.1 mouse_genomes_project 7 97787004 97794234 + Grm5 protein_coding processed_transcript MGP_NODShiLtJ_T0083034.1 MGP_NODShiLtJ_G0031927.1 mouse_genomes_project 7 43419651 43455455 - MGP_NODShiLtJ_P0083034 AW146154 protein_coding protein_coding MGP_NODShiLtJ_T0083035.1 MGP_NODShiLtJ_G0031927.1 mouse_genomes_project 7 43423573 43424705 - AW146154 protein_coding retained_intron MGP_NODShiLtJ_T0083036.1 MGP_NODShiLtJ_G0031927.1 mouse_genomes_project 7 43439895 43454992 - AW146154 protein_coding processed_transcript MGP_NODShiLtJ_T0015686.1 MGP_NODShiLtJ_G0013794.1 mouse_genomes_project 7 46952066 46952994 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081122.1 MGP_NODShiLtJ_G0031403.1 mouse_genomes_project 7 3305670 3309188 - MGP_NODShiLtJ_P0081122 Vmn1r65 protein_coding protein_coding MGP_NODShiLtJ_T0085374.1 MGP_NODShiLtJ_G0032601.1 mouse_genomes_project 7 120492671 120528914 + MGP_NODShiLtJ_P0085374 Nlrp14 protein_coding protein_coding MGP_NODShiLtJ_T0085375.1 MGP_NODShiLtJ_G0032601.1 mouse_genomes_project 7 120513857 120528923 + MGP_NODShiLtJ_P0085375 Nlrp14 protein_coding protein_coding MGP_NODShiLtJ_T0081814.1 MGP_NODShiLtJ_G0031647.1 mouse_genomes_project 7 24276365 24281591 - MGP_NODShiLtJ_P0081814 Pinlyp protein_coding protein_coding MGP_NODShiLtJ_T0098445.1 MGP_NODShiLtJ_G0036846.1 mouse_genomes_project 7 79396561 79397594 - sense_intronic sense_intronic MGP_NODShiLtJ_T0015593.1 MGP_NODShiLtJ_G0013701.1 mouse_genomes_project 7 16035406 16035871 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082015.1 MGP_NODShiLtJ_G0031693.1 mouse_genomes_project 7 25691966 25724094 - MGP_NODShiLtJ_P0082015 Axl protein_coding protein_coding MGP_NODShiLtJ_T0082016.1 MGP_NODShiLtJ_G0031693.1 mouse_genomes_project 7 25692323 25724112 - MGP_NODShiLtJ_P0082016 Axl protein_coding protein_coding MGP_NODShiLtJ_T0082017.1 MGP_NODShiLtJ_G0031693.1 mouse_genomes_project 7 25695371 25698697 - Axl protein_coding retained_intron MGP_NODShiLtJ_T0082018.1 MGP_NODShiLtJ_G0031693.1 mouse_genomes_project 7 25696062 25699046 - Axl protein_coding retained_intron MGP_NODShiLtJ_T0082019.1 MGP_NODShiLtJ_G0031693.1 mouse_genomes_project 7 25698426 25724107 - Axl protein_coding retained_intron MGP_NODShiLtJ_T0082020.1 MGP_NODShiLtJ_G0031693.1 mouse_genomes_project 7 25700991 25709147 - MGP_NODShiLtJ_P0082020 Axl protein_coding protein_coding MGP_NODShiLtJ_T0082021.1 MGP_NODShiLtJ_G0031693.1 mouse_genomes_project 7 25714108 25722447 - Axl protein_coding retained_intron MGP_NODShiLtJ_T0082022.1 MGP_NODShiLtJ_G0031693.1 mouse_genomes_project 7 25721305 25722953 - Axl protein_coding retained_intron MGP_NODShiLtJ_T0084692.1 MGP_NODShiLtJ_G0032337.1 mouse_genomes_project 7 109373156 109395294 + MGP_NODShiLtJ_P0084692 Clns1a protein_coding protein_coding MGP_NODShiLtJ_T0084693.1 MGP_NODShiLtJ_G0032337.1 mouse_genomes_project 7 109373217 109389174 + Clns1a protein_coding retained_intron MGP_NODShiLtJ_T0084694.1 MGP_NODShiLtJ_G0032337.1 mouse_genomes_project 7 109394208 109397212 + Clns1a protein_coding retained_intron MGP_NODShiLtJ_T0102139.1 MGP_NODShiLtJ_G0040305.1 mouse_genomes_project 7 46802858 46887069 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085781.1 MGP_NODShiLtJ_G0032723.1 mouse_genomes_project 7 134263933 134288764 + MGP_NODShiLtJ_P0085781 Acsm4 protein_coding protein_coding MGP_NODShiLtJ_T0082011.1 MGP_NODShiLtJ_G0031692.1 mouse_genomes_project 7 25655051 25689069 - MGP_NODShiLtJ_P0082011 Hnrnpul1 protein_coding protein_coding MGP_NODShiLtJ_T0082012.1 MGP_NODShiLtJ_G0031692.1 mouse_genomes_project 7 25671098 25689135 - MGP_NODShiLtJ_P0082012 Hnrnpul1 protein_coding protein_coding MGP_NODShiLtJ_T0082013.1 MGP_NODShiLtJ_G0031692.1 mouse_genomes_project 7 25673776 25676026 - Hnrnpul1 protein_coding retained_intron MGP_NODShiLtJ_T0082014.1 MGP_NODShiLtJ_G0031692.1 mouse_genomes_project 7 25676202 25678817 - Hnrnpul1 protein_coding retained_intron MGP_NODShiLtJ_T0082464.1 MGP_NODShiLtJ_G0031810.1 mouse_genomes_project 7 30642140 30648550 - MGP_NODShiLtJ_P0082464 Zfp14 protein_coding protein_coding MGP_NODShiLtJ_T0081120.1 MGP_NODShiLtJ_G0031401.1 mouse_genomes_project 7 3166127 3167574 - MGP_NODShiLtJ_P0081120 Vmn1r56 protein_coding protein_coding MGP_NODShiLtJ_T0083101.1 MGP_NODShiLtJ_G0031949.1 mouse_genomes_project 7 46078000 46097641 - MGP_NODShiLtJ_P0083101 Iglon5 protein_coding protein_coding MGP_NODShiLtJ_T0083102.1 MGP_NODShiLtJ_G0031949.1 mouse_genomes_project 7 46079282 46084310 - MGP_NODShiLtJ_P0083102 Iglon5 protein_coding protein_coding MGP_NODShiLtJ_T0086025.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141178246 141232796 - MGP_NODShiLtJ_P0086025 Xpo6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0086026.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141179898 141287057 - MGP_NODShiLtJ_P0086026 Xpo6 protein_coding protein_coding MGP_NODShiLtJ_T0086027.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141179899 141286964 - MGP_NODShiLtJ_P0086027 Xpo6 protein_coding protein_coding MGP_NODShiLtJ_T0086028.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141179904 141188251 - Xpo6 protein_coding retained_intron MGP_NODShiLtJ_T0086029.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141179904 141245191 - Xpo6 protein_coding processed_transcript MGP_NODShiLtJ_T0086030.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141179904 141183009 - MGP_NODShiLtJ_P0086030 Xpo6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086031.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141179917 141185367 - MGP_NODShiLtJ_P0086031 Xpo6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086032.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141180252 141183222 - Xpo6 protein_coding retained_intron MGP_NODShiLtJ_T0086033.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141180529 141185330 - MGP_NODShiLtJ_P0086033 Xpo6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086034.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141182957 141192014 - MGP_NODShiLtJ_P0086034 Xpo6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086035.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141186721 141191946 - MGP_NODShiLtJ_P0086035 Xpo6 protein_coding protein_coding MGP_NODShiLtJ_T0086036.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141192019 141223335 - MGP_NODShiLtJ_P0086036 Xpo6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086037.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141199056 141286978 - Xpo6 protein_coding retained_intron MGP_NODShiLtJ_T0086038.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141209027 141236305 - MGP_NODShiLtJ_P0086038 Xpo6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086039.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141223315 141245332 - MGP_NODShiLtJ_P0086039 Xpo6 protein_coding protein_coding MGP_NODShiLtJ_T0086040.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141232565 141245340 - Xpo6 protein_coding processed_transcript MGP_NODShiLtJ_T0086041.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141234957 141286898 - Xpo6 protein_coding processed_transcript MGP_NODShiLtJ_T0086042.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141236091 141286457 - MGP_NODShiLtJ_P0086042 Xpo6 protein_coding protein_coding MGP_NODShiLtJ_T0086043.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141245327 141286484 - MGP_NODShiLtJ_P0086043 Xpo6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086044.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141254457 141267861 - Xpo6 protein_coding processed_transcript MGP_NODShiLtJ_T0086045.1 MGP_NODShiLtJ_G0032781.1 mouse_genomes_project 7 141265998 141273640 - Xpo6 protein_coding retained_intron MGP_NODShiLtJ_T0011592.1 MGP_NODShiLtJ_G0009725.1 mouse_genomes_project 7 159787455 159787574 + Gm27803 misc_RNA misc_RNA MGP_NODShiLtJ_T0083613.1 MGP_NODShiLtJ_G0032082.1 mouse_genomes_project 7 49361137 49560853 - MGP_NODShiLtJ_P0083613 Sergef protein_coding protein_coding MGP_NODShiLtJ_T0083614.1 MGP_NODShiLtJ_G0032082.1 mouse_genomes_project 7 49361190 49522936 - Sergef protein_coding processed_transcript MGP_NODShiLtJ_T0083615.1 MGP_NODShiLtJ_G0032082.1 mouse_genomes_project 7 49361443 49534482 - Sergef protein_coding processed_transcript MGP_NODShiLtJ_T0083616.1 MGP_NODShiLtJ_G0032082.1 mouse_genomes_project 7 49430626 49560818 - MGP_NODShiLtJ_P0083616 Sergef protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083617.1 MGP_NODShiLtJ_G0032082.1 mouse_genomes_project 7 49552496 49555784 - Sergef protein_coding retained_intron MGP_NODShiLtJ_T0083618.1 MGP_NODShiLtJ_G0032082.1 mouse_genomes_project 7 49552518 49560677 - MGP_NODShiLtJ_P0083618 Sergef protein_coding protein_coding MGP_NODShiLtJ_T0083619.1 MGP_NODShiLtJ_G0032082.1 mouse_genomes_project 7 49552532 49560626 - Sergef protein_coding processed_transcript MGP_NODShiLtJ_T0083556.1 MGP_NODShiLtJ_G0032065.1 mouse_genomes_project 7 48676749 48684233 - MGP_NODShiLtJ_P0083556 Cyth2 protein_coding protein_coding MGP_NODShiLtJ_T0083557.1 MGP_NODShiLtJ_G0032065.1 mouse_genomes_project 7 48677755 48684419 - MGP_NODShiLtJ_P0083557 Cyth2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083558.1 MGP_NODShiLtJ_G0032065.1 mouse_genomes_project 7 48677765 48684399 - MGP_NODShiLtJ_P0083558 Cyth2 protein_coding protein_coding MGP_NODShiLtJ_T0083559.1 MGP_NODShiLtJ_G0032065.1 mouse_genomes_project 7 48680170 48684389 - Cyth2 protein_coding processed_transcript MGP_NODShiLtJ_T0083560.1 MGP_NODShiLtJ_G0032065.1 mouse_genomes_project 7 48680971 48684698 - MGP_NODShiLtJ_P0083560 Cyth2 protein_coding protein_coding MGP_NODShiLtJ_T0083561.1 MGP_NODShiLtJ_G0032065.1 mouse_genomes_project 7 48681640 48684378 - Cyth2 protein_coding processed_transcript MGP_NODShiLtJ_T0102153.1 MGP_NODShiLtJ_G0040319.1 mouse_genomes_project 7 51802159 51803122 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082906.1 MGP_NODShiLtJ_G0031901.1 mouse_genomes_project 7 36420476 36423413 - Lrp3 protein_coding processed_transcript MGP_NODShiLtJ_T0082907.1 MGP_NODShiLtJ_G0031901.1 mouse_genomes_project 7 36421327 36423679 - Lrp3 protein_coding retained_intron MGP_NODShiLtJ_T0082908.1 MGP_NODShiLtJ_G0031901.1 mouse_genomes_project 7 36421327 36437633 - MGP_NODShiLtJ_P0082908 Lrp3 protein_coding protein_coding MGP_NODShiLtJ_T0082909.1 MGP_NODShiLtJ_G0031901.1 mouse_genomes_project 7 36421328 36437376 - MGP_NODShiLtJ_P0082909 Lrp3 protein_coding protein_coding MGP_NODShiLtJ_T0087024.1 MGP_NODShiLtJ_G0032982.1 mouse_genomes_project 7 156524263 156525199 - MGP_NODShiLtJ_P0087024 Olfr60 protein_coding protein_coding MGP_NODShiLtJ_T0084507.1 MGP_NODShiLtJ_G0032281.1 mouse_genomes_project 7 95630352 95640395 - MGP_NODShiLtJ_P0084507 Olfr309 protein_coding protein_coding MGP_NODShiLtJ_T0084508.1 MGP_NODShiLtJ_G0032281.1 mouse_genomes_project 7 95630352 95631279 - MGP_NODShiLtJ_P0084508 Olfr309 protein_coding protein_coding MGP_NODShiLtJ_T0015658.1 MGP_NODShiLtJ_G0013766.1 mouse_genomes_project 7 42780214 42781015 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082177.1 MGP_NODShiLtJ_G0031735.1 mouse_genomes_project 7 28011240 28028286 + MGP_NODShiLtJ_P0082177 Zfp607b protein_coding protein_coding MGP_NODShiLtJ_T0082178.1 MGP_NODShiLtJ_G0031735.1 mouse_genomes_project 7 28014402 28025869 + MGP_NODShiLtJ_P0082178 Zfp607b protein_coding protein_coding MGP_NODShiLtJ_T0002214.1 MGP_NODShiLtJ_G0002125.1 mouse_genomes_project 7 83022184 83023811 + TEC TEC MGP_NODShiLtJ_T0084455.1 MGP_NODShiLtJ_G0032260.1 mouse_genomes_project 7 91054999 91082576 + MGP_NODShiLtJ_P0084455 Efl1 protein_coding protein_coding MGP_NODShiLtJ_T0084456.1 MGP_NODShiLtJ_G0032260.1 mouse_genomes_project 7 91054999 91183974 + MGP_NODShiLtJ_P0084456 Efl1 protein_coding protein_coding MGP_NODShiLtJ_T0084457.1 MGP_NODShiLtJ_G0032260.1 mouse_genomes_project 7 91055014 91106694 + Efl1 protein_coding retained_intron MGP_NODShiLtJ_T0084458.1 MGP_NODShiLtJ_G0032260.1 mouse_genomes_project 7 91055026 91183974 + MGP_NODShiLtJ_P0084458 Efl1 protein_coding protein_coding MGP_NODShiLtJ_T0084459.1 MGP_NODShiLtJ_G0032260.1 mouse_genomes_project 7 91078249 91082565 + Efl1 protein_coding processed_transcript MGP_NODShiLtJ_T0082447.1 MGP_NODShiLtJ_G0031805.1 mouse_genomes_project 7 30488210 30503604 - MGP_NODShiLtJ_P0082447 Zfp27 protein_coding protein_coding MGP_NODShiLtJ_T0082448.1 MGP_NODShiLtJ_G0031805.1 mouse_genomes_project 7 30488592 30496861 - MGP_NODShiLtJ_P0082448 Zfp27 protein_coding protein_coding MGP_NODShiLtJ_T0082449.1 MGP_NODShiLtJ_G0031805.1 mouse_genomes_project 7 30488593 30503136 - MGP_NODShiLtJ_P0082449 Zfp27 protein_coding protein_coding MGP_NODShiLtJ_T0082450.1 MGP_NODShiLtJ_G0031805.1 mouse_genomes_project 7 30488593 30503563 - MGP_NODShiLtJ_P0082450 Zfp27 protein_coding protein_coding MGP_NODShiLtJ_T0082451.1 MGP_NODShiLtJ_G0031805.1 mouse_genomes_project 7 30488956 30494378 - MGP_NODShiLtJ_P0082451 Zfp27 protein_coding protein_coding MGP_NODShiLtJ_T0082452.1 MGP_NODShiLtJ_G0031805.1 mouse_genomes_project 7 30496609 30503092 - Zfp27 protein_coding processed_transcript MGP_NODShiLtJ_T0081316.1 MGP_NODShiLtJ_G0031483.1 mouse_genomes_project 7 12316874 12446796 - MGP_NODShiLtJ_P0081316 protein_coding protein_coding MGP_NODShiLtJ_T0084889.1 MGP_NODShiLtJ_G0032384.1 mouse_genomes_project 7 112717401 112776523 + MGP_NODShiLtJ_P0084889 Fam168a protein_coding protein_coding MGP_NODShiLtJ_T0015634.1 MGP_NODShiLtJ_G0013742.1 mouse_genomes_project 7 34229944 34230941 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099469.1 MGP_NODShiLtJ_G0037863.1 mouse_genomes_project 7 1126553 1126724 + Gm23741 snRNA snRNA MGP_NODShiLtJ_T0085479.1 MGP_NODShiLtJ_G0032659.1 mouse_genomes_project 7 123652466 123672911 - MGP_NODShiLtJ_P0085479 Tmem41b protein_coding protein_coding MGP_NODShiLtJ_T0085480.1 MGP_NODShiLtJ_G0032659.1 mouse_genomes_project 7 123653779 123673402 - MGP_NODShiLtJ_P0085480 Tmem41b protein_coding protein_coding MGP_NODShiLtJ_T0085481.1 MGP_NODShiLtJ_G0032659.1 mouse_genomes_project 7 123660585 123672622 - MGP_NODShiLtJ_P0085481 Tmem41b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085482.1 MGP_NODShiLtJ_G0032659.1 mouse_genomes_project 7 123660585 123672735 - MGP_NODShiLtJ_P0085482 Tmem41b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085483.1 MGP_NODShiLtJ_G0032659.1 mouse_genomes_project 7 123660652 123672709 - MGP_NODShiLtJ_P0085483 Tmem41b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085484.1 MGP_NODShiLtJ_G0032659.1 mouse_genomes_project 7 123664851 123672719 - Tmem41b protein_coding retained_intron MGP_NODShiLtJ_T0002190.1 MGP_NODShiLtJ_G0002102.1 mouse_genomes_project 7 60941809 60942987 - TEC TEC MGP_NODShiLtJ_T0100766.1 MGP_NODShiLtJ_G0039160.1 mouse_genomes_project 7 114916519 114916641 - Gm24210 snoRNA snoRNA MGP_NODShiLtJ_T0011581.1 MGP_NODShiLtJ_G0009714.1 mouse_genomes_project 7 101546577 101546783 - Gm27660 misc_RNA misc_RNA MGP_NODShiLtJ_T0085707.1 MGP_NODShiLtJ_G0032704.1 mouse_genomes_project 7 132569019 132701210 - MGP_NODShiLtJ_P0085707 Smg1 protein_coding protein_coding MGP_NODShiLtJ_T0085708.1 MGP_NODShiLtJ_G0032704.1 mouse_genomes_project 7 132570432 132672237 - MGP_NODShiLtJ_P0085708 Smg1 protein_coding protein_coding MGP_NODShiLtJ_T0085709.1 MGP_NODShiLtJ_G0032704.1 mouse_genomes_project 7 132579842 132580857 - MGP_NODShiLtJ_P0085709 Smg1 protein_coding protein_coding MGP_NODShiLtJ_T0085710.1 MGP_NODShiLtJ_G0032704.1 mouse_genomes_project 7 132642798 132701210 - Smg1 protein_coding retained_intron MGP_NODShiLtJ_T0085711.1 MGP_NODShiLtJ_G0032704.1 mouse_genomes_project 7 132652929 132701200 - MGP_NODShiLtJ_P0085711 Smg1 protein_coding protein_coding MGP_NODShiLtJ_T0085712.1 MGP_NODShiLtJ_G0032704.1 mouse_genomes_project 7 132655245 132700922 - Smg1 protein_coding retained_intron MGP_NODShiLtJ_T0010812.1 MGP_NODShiLtJ_G0008945.1 mouse_genomes_project 7 132194156 132194261 + Gm24063 miRNA miRNA MGP_NODShiLtJ_T0011569.1 MGP_NODShiLtJ_G0009702.1 mouse_genomes_project 7 11677743 11678011 + Gm23499 misc_RNA misc_RNA MGP_NODShiLtJ_T0008876.1 MGP_NODShiLtJ_G0007151.1 mouse_genomes_project 7 91259043 91268686 + 1700010L04Rik lincRNA lincRNA MGP_NODShiLtJ_T0008877.1 MGP_NODShiLtJ_G0007151.1 mouse_genomes_project 7 91265092 91268685 + 1700010L04Rik lincRNA lincRNA MGP_NODShiLtJ_T0008878.1 MGP_NODShiLtJ_G0007151.1 mouse_genomes_project 7 91265102 91268241 + 1700010L04Rik lincRNA lincRNA MGP_NODShiLtJ_T0015748.1 MGP_NODShiLtJ_G0013856.1 mouse_genomes_project 7 105664593 105664725 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082268.1 MGP_NODShiLtJ_G0031763.1 mouse_genomes_project 7 28947834 28949604 - MGP_NODShiLtJ_P0082268 protein_coding protein_coding MGP_NODShiLtJ_T0084743.1 MGP_NODShiLtJ_G0032348.1 mouse_genomes_project 7 110245517 110255295 + MGP_NODShiLtJ_P0084743 Lrrc32 protein_coding protein_coding MGP_NODShiLtJ_T0084744.1 MGP_NODShiLtJ_G0032348.1 mouse_genomes_project 7 110246734 110259227 + MGP_NODShiLtJ_P0084744 Lrrc32 protein_coding protein_coding MGP_NODShiLtJ_T0084745.1 MGP_NODShiLtJ_G0032348.1 mouse_genomes_project 7 110251262 110258881 + MGP_NODShiLtJ_P0084745 Lrrc32 protein_coding protein_coding MGP_NODShiLtJ_T0005175.1 MGP_NODShiLtJ_G0004396.1 mouse_genomes_project 7 87081266 87120510 - Gm26633 antisense antisense MGP_NODShiLtJ_T0085863.1 MGP_NODShiLtJ_G0032744.1 mouse_genomes_project 7 135710705 135735460 - Cdr2 protein_coding processed_transcript MGP_NODShiLtJ_T0085864.1 MGP_NODShiLtJ_G0032744.1 mouse_genomes_project 7 135710705 135735982 - MGP_NODShiLtJ_P0085864 Cdr2 protein_coding protein_coding MGP_NODShiLtJ_T0015818.1 MGP_NODShiLtJ_G0013926.1 mouse_genomes_project 7 160122773 160123329 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084557.1 MGP_NODShiLtJ_G0032307.1 mouse_genomes_project 7 99840664 100006546 + Me3 protein_coding retained_intron MGP_NODShiLtJ_T0084558.1 MGP_NODShiLtJ_G0032307.1 mouse_genomes_project 7 99840806 99851387 + Me3 protein_coding processed_transcript MGP_NODShiLtJ_T0084559.1 MGP_NODShiLtJ_G0032307.1 mouse_genomes_project 7 99840975 100048292 + MGP_NODShiLtJ_P0084559 Me3 protein_coding protein_coding MGP_NODShiLtJ_T0084560.1 MGP_NODShiLtJ_G0032307.1 mouse_genomes_project 7 99841158 100042047 + Me3 protein_coding retained_intron MGP_NODShiLtJ_T0084561.1 MGP_NODShiLtJ_G0032307.1 mouse_genomes_project 7 99938054 100016518 + Me3 protein_coding processed_transcript MGP_NODShiLtJ_T0084562.1 MGP_NODShiLtJ_G0032307.1 mouse_genomes_project 7 100020948 100045894 + MGP_NODShiLtJ_P0084562 Me3 protein_coding protein_coding MGP_NODShiLtJ_T0010765.1 MGP_NODShiLtJ_G0008898.1 mouse_genomes_project 7 50062821 50062880 - Mir7056 miRNA miRNA MGP_NODShiLtJ_T0083845.1 MGP_NODShiLtJ_G0032144.1 mouse_genomes_project 7 68587173 68591835 + MGP_NODShiLtJ_P0083845 Magel2 protein_coding protein_coding MGP_NODShiLtJ_T0100730.1 MGP_NODShiLtJ_G0039124.1 mouse_genomes_project 7 36147811 36147942 - Gm25922 snoRNA snoRNA MGP_NODShiLtJ_T0082825.1 MGP_NODShiLtJ_G0031884.1 mouse_genomes_project 7 34905534 34907573 - MGP_NODShiLtJ_P0082825 Scgb2b26 protein_coding protein_coding MGP_NODShiLtJ_T0084808.1 MGP_NODShiLtJ_G0032366.1 mouse_genomes_project 7 111688395 111711938 - MGP_NODShiLtJ_P0084808 Spcs2 protein_coding protein_coding MGP_NODShiLtJ_T0015795.1 MGP_NODShiLtJ_G0013903.1 mouse_genomes_project 7 141875295 141875769 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005158.1 MGP_NODShiLtJ_G0004384.1 mouse_genomes_project 7 48385522 48386701 - antisense antisense MGP_NODShiLtJ_T0086659.1 MGP_NODShiLtJ_G0032893.1 mouse_genomes_project 7 144075221 144123808 - MGP_NODShiLtJ_P0086659 Mcmbp protein_coding protein_coding MGP_NODShiLtJ_T0086660.1 MGP_NODShiLtJ_G0032893.1 mouse_genomes_project 7 144076619 144123799 - MGP_NODShiLtJ_P0086660 Mcmbp protein_coding protein_coding MGP_NODShiLtJ_T0086661.1 MGP_NODShiLtJ_G0032893.1 mouse_genomes_project 7 144077039 144078072 - Mcmbp protein_coding processed_transcript MGP_NODShiLtJ_T0086662.1 MGP_NODShiLtJ_G0032893.1 mouse_genomes_project 7 144078175 144082545 - Mcmbp protein_coding retained_intron MGP_NODShiLtJ_T0086663.1 MGP_NODShiLtJ_G0032893.1 mouse_genomes_project 7 144093239 144095482 - Mcmbp protein_coding retained_intron MGP_NODShiLtJ_T0083079.1 MGP_NODShiLtJ_G0031941.1 mouse_genomes_project 7 46030476 46031728 + MGP_NODShiLtJ_P0083079 Gm42419 protein_coding protein_coding MGP_NODShiLtJ_T0081915.1 MGP_NODShiLtJ_G0031671.1 mouse_genomes_project 7 25084223 25093817 - MGP_NODShiLtJ_P0081915 Gsk3a protein_coding protein_coding MGP_NODShiLtJ_T0081916.1 MGP_NODShiLtJ_G0031671.1 mouse_genomes_project 7 25084223 25093817 - MGP_NODShiLtJ_P0081916 Gsk3a protein_coding protein_coding MGP_NODShiLtJ_T0081917.1 MGP_NODShiLtJ_G0031671.1 mouse_genomes_project 7 25085430 25087210 - Gsk3a protein_coding retained_intron MGP_NODShiLtJ_T0102158.1 MGP_NODShiLtJ_G0040324.1 mouse_genomes_project 7 52050776 52051395 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085166.1 MGP_NODShiLtJ_G0032505.1 mouse_genomes_project 7 116648738 116649686 - MGP_NODShiLtJ_P0085166 Olfr645 protein_coding protein_coding MGP_NODShiLtJ_T0085132.1 MGP_NODShiLtJ_G0032473.1 mouse_genomes_project 7 115832571 115836651 + MGP_NODShiLtJ_P0085132 Olfr613 protein_coding protein_coding MGP_NODShiLtJ_T0081205.1 MGP_NODShiLtJ_G0031449.1 mouse_genomes_project 7 10465838 10466756 + MGP_NODShiLtJ_P0081205 Vmn1r82 protein_coding protein_coding MGP_NODShiLtJ_T0081206.1 MGP_NODShiLtJ_G0031449.1 mouse_genomes_project 7 10465841 10466756 + MGP_NODShiLtJ_P0081206 Vmn1r82 protein_coding protein_coding MGP_NODShiLtJ_T0085025.1 MGP_NODShiLtJ_G0032408.1 mouse_genomes_project 7 114148863 114183498 + MGP_NODShiLtJ_P0085025 Xntrpc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085026.1 MGP_NODShiLtJ_G0032408.1 mouse_genomes_project 7 114148863 114183050 + MGP_NODShiLtJ_P0085026 Xntrpc protein_coding protein_coding MGP_NODShiLtJ_T0085028.1 MGP_NODShiLtJ_G0032408.1 mouse_genomes_project 7 114148928 114182973 + MGP_NODShiLtJ_P0085028 Xntrpc protein_coding protein_coding MGP_NODShiLtJ_T0085029.1 MGP_NODShiLtJ_G0032408.1 mouse_genomes_project 7 114160088 114182973 + MGP_NODShiLtJ_P0085029 Xntrpc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085030.1 MGP_NODShiLtJ_G0032408.1 mouse_genomes_project 7 114160092 114182965 + MGP_NODShiLtJ_P0085030 Xntrpc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0008801.1 MGP_NODShiLtJ_G0007102.1 mouse_genomes_project 7 70444638 70451226 - Gm45054 lincRNA lincRNA MGP_NODShiLtJ_T0008840.1 MGP_NODShiLtJ_G0007132.1 mouse_genomes_project 7 80997923 81005373 + Gm44737 lincRNA lincRNA MGP_NODShiLtJ_T0010757.1 MGP_NODShiLtJ_G0008890.1 mouse_genomes_project 7 46062593 46062666 + Mir7051 miRNA miRNA MGP_NODShiLtJ_T0002235.1 MGP_NODShiLtJ_G0002146.1 mouse_genomes_project 7 88285169 88287010 - TEC TEC MGP_NODShiLtJ_T0086261.1 MGP_NODShiLtJ_G0032814.1 mouse_genomes_project 7 142030127 142049149 - MGP_NODShiLtJ_P0086261 Taok2 protein_coding protein_coding MGP_NODShiLtJ_T0086262.1 MGP_NODShiLtJ_G0032814.1 mouse_genomes_project 7 142030838 142033340 - MGP_NODShiLtJ_P0086262 Taok2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0086263.1 MGP_NODShiLtJ_G0032814.1 mouse_genomes_project 7 142030948 142031698 - Taok2 protein_coding retained_intron MGP_NODShiLtJ_T0086264.1 MGP_NODShiLtJ_G0032814.1 mouse_genomes_project 7 142033944 142049149 - MGP_NODShiLtJ_P0086264 Taok2 protein_coding protein_coding MGP_NODShiLtJ_T0086265.1 MGP_NODShiLtJ_G0032814.1 mouse_genomes_project 7 142044242 142047405 - Taok2 protein_coding retained_intron MGP_NODShiLtJ_T0015778.1 MGP_NODShiLtJ_G0013886.1 mouse_genomes_project 7 127305486 127305888 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008784.1 MGP_NODShiLtJ_G0007089.1 mouse_genomes_project 7 43299117 43304119 + lincRNA lincRNA MGP_NODShiLtJ_T0102117.1 MGP_NODShiLtJ_G0040283.1 mouse_genomes_project 7 34725787 34726613 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081318.1 MGP_NODShiLtJ_G0031485.1 mouse_genomes_project 7 12316875 12446750 - MGP_NODShiLtJ_P0081318 protein_coding protein_coding MGP_NODShiLtJ_T0085110.1 MGP_NODShiLtJ_G0032452.1 mouse_genomes_project 7 115289210 115290321 + MGP_NODShiLtJ_P0085110 protein_coding protein_coding MGP_NODShiLtJ_T0010832.1 MGP_NODShiLtJ_G0008965.1 mouse_genomes_project 7 159130315 159130388 - Mir483 miRNA miRNA MGP_NODShiLtJ_T0008903.1 MGP_NODShiLtJ_G0007171.1 mouse_genomes_project 7 123684906 123693920 - lincRNA lincRNA MGP_NODShiLtJ_T0008904.1 MGP_NODShiLtJ_G0007171.1 mouse_genomes_project 7 123684922 123685748 - lincRNA lincRNA MGP_NODShiLtJ_T0008905.1 MGP_NODShiLtJ_G0007171.1 mouse_genomes_project 7 123687676 123693905 - lincRNA lincRNA MGP_NODShiLtJ_T0085409.1 MGP_NODShiLtJ_G0032629.1 mouse_genomes_project 7 122053960 122055139 - MGP_NODShiLtJ_P0085409 Olfr502 protein_coding protein_coding MGP_NODShiLtJ_T0099471.1 MGP_NODShiLtJ_G0037865.1 mouse_genomes_project 7 2516498 2516605 - Gm23942 snRNA snRNA MGP_NODShiLtJ_T0086066.1 MGP_NODShiLtJ_G0032785.1 mouse_genomes_project 7 141504860 141520933 - MGP_NODShiLtJ_P0086066 Nfatc2ip protein_coding protein_coding MGP_NODShiLtJ_T0086067.1 MGP_NODShiLtJ_G0032785.1 mouse_genomes_project 7 141506884 141514780 - MGP_NODShiLtJ_P0086067 Nfatc2ip protein_coding protein_coding MGP_NODShiLtJ_T0081283.1 MGP_NODShiLtJ_G0031474.1 mouse_genomes_project 7 11397054 11397942 - MGP_NODShiLtJ_P0081283 Vmn1r87 protein_coding protein_coding MGP_NODShiLtJ_T0015613.1 MGP_NODShiLtJ_G0013721.1 mouse_genomes_project 7 25728475 25729091 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099477.1 MGP_NODShiLtJ_G0037871.1 mouse_genomes_project 7 18007925 18008033 - Gm24464 snRNA snRNA MGP_NODShiLtJ_T0005252.1 MGP_NODShiLtJ_G0004450.1 mouse_genomes_project 7 157966283 157969965 - Gm16982 antisense antisense MGP_NODShiLtJ_T0082858.1 MGP_NODShiLtJ_G0031892.1 mouse_genomes_project 7 35361273 35415884 - MGP_NODShiLtJ_P0082858 4931406P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0082859.1 MGP_NODShiLtJ_G0031892.1 mouse_genomes_project 7 35362745 35369861 - MGP_NODShiLtJ_P0082859 4931406P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0082860.1 MGP_NODShiLtJ_G0031892.1 mouse_genomes_project 7 35363746 35369672 - 4931406P16Rik protein_coding retained_intron MGP_NODShiLtJ_T0082862.1 MGP_NODShiLtJ_G0031892.1 mouse_genomes_project 7 35382031 35385207 - 4931406P16Rik protein_coding retained_intron MGP_NODShiLtJ_T0082863.1 MGP_NODShiLtJ_G0031892.1 mouse_genomes_project 7 35414645 35447354 - 4931406P16Rik protein_coding retained_intron MGP_NODShiLtJ_T0082864.1 MGP_NODShiLtJ_G0031892.1 mouse_genomes_project 7 35416164 35447349 - 4931406P16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0082865.1 MGP_NODShiLtJ_G0031892.1 mouse_genomes_project 7 35416250 35439268 - 4931406P16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0082866.1 MGP_NODShiLtJ_G0031892.1 mouse_genomes_project 7 35445870 35447312 - 4931406P16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0005186.1 MGP_NODShiLtJ_G0004404.1 mouse_genomes_project 7 88976997 88983420 + Gm44649 antisense antisense MGP_NODShiLtJ_T0005187.1 MGP_NODShiLtJ_G0004404.1 mouse_genomes_project 7 88977020 88978349 + Gm44649 antisense antisense MGP_NODShiLtJ_T0083117.1 MGP_NODShiLtJ_G0031953.1 mouse_genomes_project 7 46193754 46208998 + MGP_NODShiLtJ_P0083117 Zfp719 protein_coding protein_coding MGP_NODShiLtJ_T0083118.1 MGP_NODShiLtJ_G0031953.1 mouse_genomes_project 7 46193763 46205338 + MGP_NODShiLtJ_P0083118 Zfp719 protein_coding protein_coding MGP_NODShiLtJ_T0083119.1 MGP_NODShiLtJ_G0031953.1 mouse_genomes_project 7 46193783 46200271 + Zfp719 protein_coding retained_intron MGP_NODShiLtJ_T0015760.1 MGP_NODShiLtJ_G0013868.1 mouse_genomes_project 7 110211454 110211694 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081505.1 MGP_NODShiLtJ_G0031549.1 mouse_genomes_project 7 17774107 17875016 - MGP_NODShiLtJ_P0081505 protein_coding protein_coding MGP_NODShiLtJ_T0081506.1 MGP_NODShiLtJ_G0031549.1 mouse_genomes_project 7 17777728 17874993 - protein_coding processed_transcript MGP_NODShiLtJ_T0085428.1 MGP_NODShiLtJ_G0032645.1 mouse_genomes_project 7 122607498 122626369 + MGP_NODShiLtJ_P0085428 Tub protein_coding protein_coding MGP_NODShiLtJ_T0085429.1 MGP_NODShiLtJ_G0032645.1 mouse_genomes_project 7 122623346 122625472 + Tub protein_coding retained_intron MGP_NODShiLtJ_T0100777.1 MGP_NODShiLtJ_G0039171.1 mouse_genomes_project 7 132593691 132593822 + Gm25683 snoRNA snoRNA MGP_NODShiLtJ_T0085941.1 MGP_NODShiLtJ_G0032765.1 mouse_genomes_project 7 137539041 137641237 + MGP_NODShiLtJ_P0085941 Cacng3 protein_coding protein_coding MGP_NODShiLtJ_T0085942.1 MGP_NODShiLtJ_G0032765.1 mouse_genomes_project 7 137539940 137640265 + MGP_NODShiLtJ_P0085942 Cacng3 protein_coding protein_coding MGP_NODShiLtJ_T0085943.1 MGP_NODShiLtJ_G0032765.1 mouse_genomes_project 7 137539967 137640384 + MGP_NODShiLtJ_P0085943 Cacng3 protein_coding protein_coding MGP_NODShiLtJ_T0100755.1 MGP_NODShiLtJ_G0039149.1 mouse_genomes_project 7 74240228 74240365 - Gm23233 snoRNA snoRNA MGP_NODShiLtJ_T0081020.1 MGP_NODShiLtJ_G0031365.1 mouse_genomes_project 7 1767005 1803731 - MGP_NODShiLtJ_P0081020 Hspbp1 protein_coding protein_coding MGP_NODShiLtJ_T0081021.1 MGP_NODShiLtJ_G0031365.1 mouse_genomes_project 7 1768620 1771094 - MGP_NODShiLtJ_P0081021 Hspbp1 protein_coding protein_coding MGP_NODShiLtJ_T0081022.1 MGP_NODShiLtJ_G0031365.1 mouse_genomes_project 7 1770664 1771259 - Hspbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0081023.1 MGP_NODShiLtJ_G0031365.1 mouse_genomes_project 7 1771071 1803657 - MGP_NODShiLtJ_P0081023 Hspbp1 protein_coding protein_coding MGP_NODShiLtJ_T0081024.1 MGP_NODShiLtJ_G0031365.1 mouse_genomes_project 7 1788830 1803324 - MGP_NODShiLtJ_P0081024 Hspbp1 protein_coding protein_coding MGP_NODShiLtJ_T0081025.1 MGP_NODShiLtJ_G0031365.1 mouse_genomes_project 7 1788830 1803644 - MGP_NODShiLtJ_P0081025 Hspbp1 protein_coding protein_coding MGP_NODShiLtJ_T0081224.1 MGP_NODShiLtJ_G0031459.1 mouse_genomes_project 7 11054973 11070867 + MGP_NODShiLtJ_P0081224 Zfp110 protein_coding protein_coding MGP_NODShiLtJ_T0081225.1 MGP_NODShiLtJ_G0031459.1 mouse_genomes_project 7 11055028 11056306 + Zfp110 protein_coding processed_transcript MGP_NODShiLtJ_T0081226.1 MGP_NODShiLtJ_G0031459.1 mouse_genomes_project 7 11055249 11056898 + Zfp110 protein_coding retained_intron MGP_NODShiLtJ_T0081227.1 MGP_NODShiLtJ_G0031459.1 mouse_genomes_project 7 11055695 11070213 + MGP_NODShiLtJ_P0081227 Zfp110 protein_coding protein_coding MGP_NODShiLtJ_T0081228.1 MGP_NODShiLtJ_G0031459.1 mouse_genomes_project 7 11056502 11065143 + Zfp110 protein_coding processed_transcript MGP_NODShiLtJ_T0081642.1 MGP_NODShiLtJ_G0031587.1 mouse_genomes_project 7 18858280 18892370 + MGP_NODShiLtJ_P0081642 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081643.1 MGP_NODShiLtJ_G0031587.1 mouse_genomes_project 7 18883255 18892364 + MGP_NODShiLtJ_P0081643 protein_coding protein_coding MGP_NODShiLtJ_T0084617.1 MGP_NODShiLtJ_G0032322.1 mouse_genomes_project 7 103333388 103373941 - MGP_NODShiLtJ_P0084617 Pcf11 protein_coding protein_coding MGP_NODShiLtJ_T0084618.1 MGP_NODShiLtJ_G0032322.1 mouse_genomes_project 7 103333936 103367494 - MGP_NODShiLtJ_P0084618 Pcf11 protein_coding protein_coding MGP_NODShiLtJ_T0084619.1 MGP_NODShiLtJ_G0032322.1 mouse_genomes_project 7 103336482 103337874 - Pcf11 protein_coding retained_intron MGP_NODShiLtJ_T0002149.1 MGP_NODShiLtJ_G0002061.1 mouse_genomes_project 7 1765136 1766431 + TEC TEC MGP_NODShiLtJ_T0083057.1 MGP_NODShiLtJ_G0031936.1 mouse_genomes_project 7 44788587 44805182 - MGP_NODShiLtJ_P0083057 1700123K08Rik protein_coding protein_coding MGP_NODShiLtJ_T0083058.1 MGP_NODShiLtJ_G0031936.1 mouse_genomes_project 7 44788731 44791023 - 1700123K08Rik protein_coding retained_intron MGP_NODShiLtJ_T0085035.1 MGP_NODShiLtJ_G0032409.1 mouse_genomes_project 7 114168612 114183030 + MGP_NODShiLtJ_P0085035 Trpc2 protein_coding protein_coding MGP_NODShiLtJ_T0083890.1 MGP_NODShiLtJ_G0032154.1 mouse_genomes_project 7 70816356 70832087 - MGP_NODShiLtJ_P0083890 Mphosph10 protein_coding protein_coding MGP_NODShiLtJ_T0083891.1 MGP_NODShiLtJ_G0032154.1 mouse_genomes_project 7 70817105 70824342 - Mphosph10 protein_coding retained_intron MGP_NODShiLtJ_T0083892.1 MGP_NODShiLtJ_G0032154.1 mouse_genomes_project 7 70827807 70832055 - Mphosph10 protein_coding retained_intron MGP_NODShiLtJ_T0099523.1 MGP_NODShiLtJ_G0037917.1 mouse_genomes_project 7 141699080 141699186 - Gm25579 snRNA snRNA MGP_NODShiLtJ_T0098079.1 MGP_NODShiLtJ_G0036491.1 mouse_genomes_project 7 72962706 72962796 - Gm23957 rRNA rRNA MGP_NODShiLtJ_T0081125.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3537707 3552401 + MGP_NODShiLtJ_P0081125 Zfp444 protein_coding protein_coding MGP_NODShiLtJ_T0081126.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3537963 3559706 + MGP_NODShiLtJ_P0081126 Zfp444 protein_coding protein_coding MGP_NODShiLtJ_T0081127.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3537983 3560657 + MGP_NODShiLtJ_P0081127 Zfp444 protein_coding protein_coding MGP_NODShiLtJ_T0081128.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3537994 3559705 + MGP_NODShiLtJ_P0081128 Zfp444 protein_coding protein_coding MGP_NODShiLtJ_T0081129.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3539281 3552273 + MGP_NODShiLtJ_P0081129 Zfp444 protein_coding protein_coding MGP_NODShiLtJ_T0081130.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3539454 3552881 + Zfp444 protein_coding processed_transcript MGP_NODShiLtJ_T0081131.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3539509 3559130 + MGP_NODShiLtJ_P0081131 Zfp444 protein_coding protein_coding MGP_NODShiLtJ_T0081132.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3549905 3557442 + MGP_NODShiLtJ_P0081132 Zfp444 protein_coding protein_coding MGP_NODShiLtJ_T0081133.1 MGP_NODShiLtJ_G0031406.1 mouse_genomes_project 7 3552025 3557517 + MGP_NODShiLtJ_P0081133 Zfp444 protein_coding protein_coding MGP_NODShiLtJ_T0084850.1 MGP_NODShiLtJ_G0032377.1 mouse_genomes_project 7 112386609 112404534 + Ucp3 protein_coding retained_intron MGP_NODShiLtJ_T0084851.1 MGP_NODShiLtJ_G0032377.1 mouse_genomes_project 7 112386610 112405539 + MGP_NODShiLtJ_P0084851 Ucp3 protein_coding protein_coding MGP_NODShiLtJ_T0084852.1 MGP_NODShiLtJ_G0032377.1 mouse_genomes_project 7 112386612 112404414 + MGP_NODShiLtJ_P0084852 Ucp3 protein_coding protein_coding MGP_NODShiLtJ_T0084853.1 MGP_NODShiLtJ_G0032377.1 mouse_genomes_project 7 112386613 112404517 + Ucp3 protein_coding retained_intron MGP_NODShiLtJ_T0011570.1 MGP_NODShiLtJ_G0009703.1 mouse_genomes_project 7 14769444 14769692 + Gm24576 misc_RNA misc_RNA MGP_NODShiLtJ_T0085100.1 MGP_NODShiLtJ_G0032443.1 mouse_genomes_project 7 115116250 115117207 + MGP_NODShiLtJ_P0085100 Olfr572 protein_coding protein_coding MGP_NODShiLtJ_T0102121.1 MGP_NODShiLtJ_G0040287.1 mouse_genomes_project 7 34899722 34900700 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084521.1 MGP_NODShiLtJ_G0032294.1 mouse_genomes_project 7 96276562 96360412 - MGP_NODShiLtJ_P0084521 Folh1 protein_coding protein_coding MGP_NODShiLtJ_T0084522.1 MGP_NODShiLtJ_G0032294.1 mouse_genomes_project 7 96276562 96360356 - MGP_NODShiLtJ_P0084522 Folh1 protein_coding protein_coding MGP_NODShiLtJ_T0081920.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25132146 25164474 + MGP_NODShiLtJ_P0081920 Cic protein_coding protein_coding MGP_NODShiLtJ_T0081921.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25132829 25136608 + MGP_NODShiLtJ_P0081921 Cic protein_coding protein_coding MGP_NODShiLtJ_T0081922.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25143761 25155284 + Cic protein_coding processed_transcript MGP_NODShiLtJ_T0081923.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25144977 25155247 + Cic protein_coding processed_transcript MGP_NODShiLtJ_T0081924.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25153030 25164460 + MGP_NODShiLtJ_P0081924 Cic protein_coding protein_coding MGP_NODShiLtJ_T0081925.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25153030 25164463 + MGP_NODShiLtJ_P0081925 Cic protein_coding protein_coding MGP_NODShiLtJ_T0081926.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25153124 25161657 + MGP_NODShiLtJ_P0081926 Cic protein_coding protein_coding MGP_NODShiLtJ_T0081927.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25153531 25155510 + Cic protein_coding processed_transcript MGP_NODShiLtJ_T0081928.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25154984 25155999 + Cic protein_coding retained_intron MGP_NODShiLtJ_T0081929.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25156137 25164457 + Cic protein_coding retained_intron MGP_NODShiLtJ_T0081930.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25159577 25160021 + Cic protein_coding retained_intron MGP_NODShiLtJ_T0081931.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25161485 25164460 + MGP_NODShiLtJ_P0081931 Cic protein_coding protein_coding MGP_NODShiLtJ_T0081932.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25161522 25162393 + Cic protein_coding retained_intron MGP_NODShiLtJ_T0081933.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25162249 25162776 + Cic protein_coding retained_intron MGP_NODShiLtJ_T0081934.1 MGP_NODShiLtJ_G0031673.1 mouse_genomes_project 7 25163334 25164460 + MGP_NODShiLtJ_P0081934 Cic protein_coding protein_coding MGP_NODShiLtJ_T0082481.1 MGP_NODShiLtJ_G0031815.1 mouse_genomes_project 7 30748728 30764777 + MGP_NODShiLtJ_P0082481 Zfp382 protein_coding protein_coding MGP_NODShiLtJ_T0082482.1 MGP_NODShiLtJ_G0031815.1 mouse_genomes_project 7 30748756 30760912 + MGP_NODShiLtJ_P0082482 Zfp382 protein_coding protein_coding MGP_NODShiLtJ_T0082483.1 MGP_NODShiLtJ_G0031815.1 mouse_genomes_project 7 30753780 30763657 + Zfp382 protein_coding retained_intron MGP_NODShiLtJ_T0085619.1 MGP_NODShiLtJ_G0032692.1 mouse_genomes_project 7 128764638 128769492 - MGP_NODShiLtJ_P0085619 Calca protein_coding protein_coding MGP_NODShiLtJ_T0085620.1 MGP_NODShiLtJ_G0032692.1 mouse_genomes_project 7 128764728 128765806 - Calca protein_coding retained_intron MGP_NODShiLtJ_T0085621.1 MGP_NODShiLtJ_G0032692.1 mouse_genomes_project 7 128765712 128769442 - MGP_NODShiLtJ_P0085621 Calca protein_coding protein_coding MGP_NODShiLtJ_T0085622.1 MGP_NODShiLtJ_G0032692.1 mouse_genomes_project 7 128766427 128769447 - MGP_NODShiLtJ_P0085622 Calca protein_coding protein_coding MGP_NODShiLtJ_T0085623.1 MGP_NODShiLtJ_G0032692.1 mouse_genomes_project 7 128766544 128769430 - MGP_NODShiLtJ_P0085623 Calca protein_coding protein_coding MGP_NODShiLtJ_T0085624.1 MGP_NODShiLtJ_G0032692.1 mouse_genomes_project 7 128767475 128769441 - MGP_NODShiLtJ_P0085624 Calca protein_coding protein_coding MGP_NODShiLtJ_T0085625.1 MGP_NODShiLtJ_G0032692.1 mouse_genomes_project 7 128767506 128769406 - MGP_NODShiLtJ_P0085625 Calca protein_coding protein_coding MGP_NODShiLtJ_T0018171.1 MGP_NODShiLtJ_G0015519.1 mouse_genomes_project 7 2247722 2254114 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018172.1 MGP_NODShiLtJ_G0015519.1 mouse_genomes_project 7 2247723 2254029 - processed_transcript processed_transcript MGP_NODShiLtJ_T0082098.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27571253 27605571 - MGP_NODShiLtJ_P0082098 Ltbp4 protein_coding protein_coding MGP_NODShiLtJ_T0082099.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27571257 27601555 - MGP_NODShiLtJ_P0082099 Ltbp4 protein_coding protein_coding MGP_NODShiLtJ_T0082100.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27571259 27605571 - MGP_NODShiLtJ_P0082100 Ltbp4 protein_coding protein_coding MGP_NODShiLtJ_T0082101.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27572115 27601505 - MGP_NODShiLtJ_P0082101 Ltbp4 protein_coding protein_coding MGP_NODShiLtJ_T0082102.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27572196 27573088 - Ltbp4 protein_coding retained_intron MGP_NODShiLtJ_T0082103.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27572740 27577956 - MGP_NODShiLtJ_P0082103 Ltbp4 protein_coding protein_coding MGP_NODShiLtJ_T0082104.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27573677 27577975 - Ltbp4 protein_coding retained_intron MGP_NODShiLtJ_T0082105.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27576319 27577759 - Ltbp4 protein_coding retained_intron MGP_NODShiLtJ_T0082106.1 MGP_NODShiLtJ_G0031720.1 mouse_genomes_project 7 27578856 27601540 - Ltbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0015719.1 MGP_NODShiLtJ_G0013827.1 mouse_genomes_project 7 81060332 81061449 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086376.1 MGP_NODShiLtJ_G0032838.1 mouse_genomes_project 7 142467674 142469840 - MGP_NODShiLtJ_P0086376 protein_coding protein_coding MGP_NODShiLtJ_T0082428.1 MGP_NODShiLtJ_G0031798.1 mouse_genomes_project 7 30081543 30102870 + MGP_NODShiLtJ_P0082428 protein_coding protein_coding MGP_NODShiLtJ_T0082429.1 MGP_NODShiLtJ_G0031798.1 mouse_genomes_project 7 30101528 30102868 + MGP_NODShiLtJ_P0082429 protein_coding protein_coding MGP_NODShiLtJ_T0084588.1 MGP_NODShiLtJ_G0032316.1 mouse_genomes_project 7 100712773 100716485 + MGP_NODShiLtJ_P0084588 Crebzf protein_coding protein_coding MGP_NODShiLtJ_T0084589.1 MGP_NODShiLtJ_G0032316.1 mouse_genomes_project 7 100712825 100718376 + MGP_NODShiLtJ_P0084589 Crebzf protein_coding protein_coding MGP_NODShiLtJ_T0084590.1 MGP_NODShiLtJ_G0032316.1 mouse_genomes_project 7 100713714 100714746 + Crebzf protein_coding processed_transcript MGP_NODShiLtJ_T0084591.1 MGP_NODShiLtJ_G0032316.1 mouse_genomes_project 7 100713714 100714421 + MGP_NODShiLtJ_P0084591 Crebzf protein_coding protein_coding MGP_NODShiLtJ_T0085217.1 MGP_NODShiLtJ_G0032533.1 mouse_genomes_project 7 117417113 117418687 - MGP_NODShiLtJ_P0085217 Usp17le protein_coding protein_coding MGP_NODShiLtJ_T0005129.1 MGP_NODShiLtJ_G0004363.1 mouse_genomes_project 7 31223830 31224450 - antisense antisense MGP_NODShiLtJ_T0002261.1 MGP_NODShiLtJ_G0002172.1 mouse_genomes_project 7 142469048 142471100 + TEC TEC MGP_NODShiLtJ_T0084135.1 MGP_NODShiLtJ_G0032200.1 mouse_genomes_project 7 87120668 87183921 + MGP_NODShiLtJ_P0084135 Acan protein_coding protein_coding MGP_NODShiLtJ_T0084136.1 MGP_NODShiLtJ_G0032200.1 mouse_genomes_project 7 87168597 87183449 + MGP_NODShiLtJ_P0084136 Acan protein_coding protein_coding MGP_NODShiLtJ_T0083464.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48322226 48340656 - MGP_NODShiLtJ_P0083464 Nucb1 protein_coding protein_coding MGP_NODShiLtJ_T0083465.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48323524 48332606 - MGP_NODShiLtJ_P0083465 Nucb1 protein_coding protein_coding MGP_NODShiLtJ_T0083466.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48324405 48324842 - Nucb1 protein_coding processed_transcript MGP_NODShiLtJ_T0083467.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48324779 48332600 - Nucb1 protein_coding processed_transcript MGP_NODShiLtJ_T0083468.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48327519 48328191 - Nucb1 protein_coding retained_intron MGP_NODShiLtJ_T0083469.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48328079 48340565 - MGP_NODShiLtJ_P0083469 Nucb1 protein_coding protein_coding MGP_NODShiLtJ_T0083470.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48330945 48340581 - MGP_NODShiLtJ_P0083470 Nucb1 protein_coding protein_coding MGP_NODShiLtJ_T0083471.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48332414 48340639 - Nucb1 protein_coding processed_transcript MGP_NODShiLtJ_T0083472.1 MGP_NODShiLtJ_G0032044.1 mouse_genomes_project 7 48337418 48340635 - Nucb1 protein_coding retained_intron MGP_NODShiLtJ_T0083673.1 MGP_NODShiLtJ_G0032095.1 mouse_genomes_project 7 49957788 49962004 + protein_coding processed_transcript MGP_NODShiLtJ_T0083674.1 MGP_NODShiLtJ_G0032095.1 mouse_genomes_project 7 49957869 49962012 + protein_coding processed_transcript MGP_NODShiLtJ_T0083675.1 MGP_NODShiLtJ_G0032095.1 mouse_genomes_project 7 49961028 49962005 + MGP_NODShiLtJ_P0083675 protein_coding protein_coding MGP_NODShiLtJ_T0015606.1 MGP_NODShiLtJ_G0013714.1 mouse_genomes_project 7 24460500 24460703 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015640.1 MGP_NODShiLtJ_G0013748.1 mouse_genomes_project 7 34436593 34436711 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002250.1 MGP_NODShiLtJ_G0002161.1 mouse_genomes_project 7 137254974 137258124 + TEC TEC MGP_NODShiLtJ_T0015681.1 MGP_NODShiLtJ_G0013789.1 mouse_genomes_project 7 45984049 45984314 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005120.1 MGP_NODShiLtJ_G0004355.1 mouse_genomes_project 7 27508096 27516766 - Gm15567 antisense antisense MGP_NODShiLtJ_T0102080.1 MGP_NODShiLtJ_G0040247.1 mouse_genomes_project 7 10591576 10602932 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010726.1 MGP_NODShiLtJ_G0008859.1 mouse_genomes_project 7 583363 583449 + Mir3572 miRNA miRNA MGP_NODShiLtJ_T0002154.1 MGP_NODShiLtJ_G0002066.1 mouse_genomes_project 7 18322990 18326229 - TEC TEC MGP_NODShiLtJ_T0080904.1 MGP_NODShiLtJ_G0031346.1 mouse_genomes_project 7 916806 920706 - MGP_NODShiLtJ_P0080904 protein_coding protein_coding MGP_NODShiLtJ_T0010830.1 MGP_NODShiLtJ_G0008963.1 mouse_genomes_project 7 158354258 158354321 + Mir3104 miRNA miRNA MGP_NODShiLtJ_T0082054.1 MGP_NODShiLtJ_G0031708.1 mouse_genomes_project 7 27256999 27264965 + Cyp2a12 protein_coding retained_intron MGP_NODShiLtJ_T0082055.1 MGP_NODShiLtJ_G0031708.1 mouse_genomes_project 7 27257008 27264422 + MGP_NODShiLtJ_P0082055 Cyp2a12 protein_coding protein_coding MGP_NODShiLtJ_T0008964.1 MGP_NODShiLtJ_G0007209.1 mouse_genomes_project 7 146273811 146275826 - Etos1 lincRNA lincRNA MGP_NODShiLtJ_T0084555.1 MGP_NODShiLtJ_G0032305.1 mouse_genomes_project 7 99720359 99730159 - MGP_NODShiLtJ_P0084555 Prss23 protein_coding protein_coding MGP_NODShiLtJ_T0015608.1 MGP_NODShiLtJ_G0013716.1 mouse_genomes_project 7 24661634 24662160 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084863.1 MGP_NODShiLtJ_G0032379.1 mouse_genomes_project 7 112422127 112438616 - MGP_NODShiLtJ_P0084863 Dnajb13 protein_coding protein_coding MGP_NODShiLtJ_T0084864.1 MGP_NODShiLtJ_G0032379.1 mouse_genomes_project 7 112422130 112437049 - Dnajb13 protein_coding processed_transcript MGP_NODShiLtJ_T0084865.1 MGP_NODShiLtJ_G0032379.1 mouse_genomes_project 7 112422188 112435441 - Dnajb13 protein_coding processed_transcript MGP_NODShiLtJ_T0087290.1 MGP_NODShiLtJ_G0033048.1 mouse_genomes_project 7 158134750 158164605 + MGP_NODShiLtJ_P0087290 Muc5ac protein_coding protein_coding MGP_NODShiLtJ_T0087291.1 MGP_NODShiLtJ_G0033048.1 mouse_genomes_project 7 158134806 158164701 + MGP_NODShiLtJ_P0087291 Muc5ac protein_coding protein_coding MGP_NODShiLtJ_T0084643.1 MGP_NODShiLtJ_G0032328.1 mouse_genomes_project 7 108940330 108963941 - MGP_NODShiLtJ_P0084643 Usp35 protein_coding protein_coding MGP_NODShiLtJ_T0084644.1 MGP_NODShiLtJ_G0032328.1 mouse_genomes_project 7 108940330 108957884 - MGP_NODShiLtJ_P0084644 Usp35 protein_coding protein_coding MGP_NODShiLtJ_T0084645.1 MGP_NODShiLtJ_G0032328.1 mouse_genomes_project 7 108940356 108946945 - Usp35 protein_coding processed_transcript MGP_NODShiLtJ_T0084646.1 MGP_NODShiLtJ_G0032328.1 mouse_genomes_project 7 108943423 108945976 - Usp35 protein_coding retained_intron MGP_NODShiLtJ_T0084647.1 MGP_NODShiLtJ_G0032328.1 mouse_genomes_project 7 108943538 108946946 - Usp35 protein_coding processed_transcript MGP_NODShiLtJ_T0084648.1 MGP_NODShiLtJ_G0032328.1 mouse_genomes_project 7 108950139 108956313 - Usp35 protein_coding retained_intron MGP_NODShiLtJ_T0099519.1 MGP_NODShiLtJ_G0037913.1 mouse_genomes_project 7 137107012 137107119 + Gm23614 snRNA snRNA MGP_NODShiLtJ_T0101404.1 MGP_NODShiLtJ_G0039608.1 mouse_genomes_project 7 117159923 117162310 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101405.1 MGP_NODShiLtJ_G0039608.1 mouse_genomes_project 7 117160567 117161801 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0085538.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124862649 124874245 - MGP_NODShiLtJ_P0085538 Eif4g2 protein_coding protein_coding MGP_NODShiLtJ_T0085539.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124864297 124865080 - Eif4g2 protein_coding processed_transcript MGP_NODShiLtJ_T0085540.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124864520 124866190 - Eif4g2 protein_coding retained_intron MGP_NODShiLtJ_T0085541.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124865328 124866178 - MGP_NODShiLtJ_P0085541 Eif4g2 protein_coding protein_coding MGP_NODShiLtJ_T0085542.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124866066 124866628 - Eif4g2 protein_coding retained_intron MGP_NODShiLtJ_T0085543.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124866801 124867314 - Eif4g2 protein_coding retained_intron MGP_NODShiLtJ_T0085544.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124867140 124868138 - Eif4g2 protein_coding processed_transcript MGP_NODShiLtJ_T0085545.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124868451 124869680 - Eif4g2 protein_coding retained_intron MGP_NODShiLtJ_T0085546.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124869878 124871293 - Eif4g2 protein_coding retained_intron MGP_NODShiLtJ_T0085547.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124870350 124874945 - MGP_NODShiLtJ_P0085547 Eif4g2 protein_coding protein_coding MGP_NODShiLtJ_T0085548.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124871266 124874121 - MGP_NODShiLtJ_P0085548 Eif4g2 protein_coding protein_coding MGP_NODShiLtJ_T0085549.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124872344 124874753 - Eif4g2 protein_coding retained_intron MGP_NODShiLtJ_T0085550.1 MGP_NODShiLtJ_G0032672.1 mouse_genomes_project 7 124872842 124873779 - MGP_NODShiLtJ_P0085550 Eif4g2 protein_coding protein_coding MGP_NODShiLtJ_T0015733.1 MGP_NODShiLtJ_G0013841.1 mouse_genomes_project 7 88719154 88719566 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081621.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18772624 18786955 + MGP_NODShiLtJ_P0081621 Ercc2 protein_coding protein_coding MGP_NODShiLtJ_T0081622.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18772632 18776323 + Ercc2 protein_coding processed_transcript MGP_NODShiLtJ_T0081623.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18772645 18786953 + MGP_NODShiLtJ_P0081623 Ercc2 protein_coding protein_coding MGP_NODShiLtJ_T0081624.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18772654 18786955 + MGP_NODShiLtJ_P0081624 Ercc2 protein_coding protein_coding MGP_NODShiLtJ_T0081625.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18772821 18776528 + Ercc2 protein_coding processed_transcript MGP_NODShiLtJ_T0081626.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18772882 18785722 + MGP_NODShiLtJ_P0081626 Ercc2 protein_coding protein_coding MGP_NODShiLtJ_T0081627.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18779476 18784941 + Ercc2 protein_coding processed_transcript MGP_NODShiLtJ_T0081628.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18781691 18783178 + Ercc2 protein_coding retained_intron MGP_NODShiLtJ_T0081629.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18784717 18786047 + Ercc2 protein_coding retained_intron MGP_NODShiLtJ_T0081630.1 MGP_NODShiLtJ_G0031582.1 mouse_genomes_project 7 18784921 18785326 + Ercc2 protein_coding retained_intron MGP_NODShiLtJ_T0002246.1 MGP_NODShiLtJ_G0002157.1 mouse_genomes_project 7 136918512 136921341 + TEC TEC MGP_NODShiLtJ_T0015562.1 MGP_NODShiLtJ_G0013670.1 mouse_genomes_project 7 1713023 1713624 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085363.1 MGP_NODShiLtJ_G0032590.1 mouse_genomes_project 7 120162189 120163383 - MGP_NODShiLtJ_P0085363 protein_coding protein_coding MGP_NODShiLtJ_T0085354.1 MGP_NODShiLtJ_G0032582.1 mouse_genomes_project 7 120024958 120031443 + MGP_NODShiLtJ_P0085354 Olfr701 protein_coding protein_coding MGP_NODShiLtJ_T0085355.1 MGP_NODShiLtJ_G0032582.1 mouse_genomes_project 7 120024993 120029949 + MGP_NODShiLtJ_P0085355 Olfr701 protein_coding protein_coding MGP_NODShiLtJ_T0086786.1 MGP_NODShiLtJ_G0032922.1 mouse_genomes_project 7 148407073 148509400 - MGP_NODShiLtJ_P0086786 Fam53b protein_coding protein_coding MGP_NODShiLtJ_T0086787.1 MGP_NODShiLtJ_G0032922.1 mouse_genomes_project 7 148452398 148509195 - MGP_NODShiLtJ_P0086787 Fam53b protein_coding protein_coding MGP_NODShiLtJ_T0086788.1 MGP_NODShiLtJ_G0032922.1 mouse_genomes_project 7 148452398 148480046 - MGP_NODShiLtJ_P0086788 Fam53b protein_coding protein_coding MGP_NODShiLtJ_T0086789.1 MGP_NODShiLtJ_G0032922.1 mouse_genomes_project 7 148453233 148509829 - MGP_NODShiLtJ_P0086789 Fam53b protein_coding protein_coding MGP_NODShiLtJ_T0086790.1 MGP_NODShiLtJ_G0032922.1 mouse_genomes_project 7 148472251 148501753 - MGP_NODShiLtJ_P0086790 Fam53b protein_coding protein_coding MGP_NODShiLtJ_T0086791.1 MGP_NODShiLtJ_G0032922.1 mouse_genomes_project 7 148472362 148473439 - Fam53b protein_coding processed_transcript MGP_NODShiLtJ_T0086792.1 MGP_NODShiLtJ_G0032922.1 mouse_genomes_project 7 148472421 148497123 - Fam53b protein_coding processed_transcript MGP_NODShiLtJ_T0085896.1 MGP_NODShiLtJ_G0032756.1 mouse_genomes_project 7 136857078 136888203 - Ears2 protein_coding retained_intron MGP_NODShiLtJ_T0085897.1 MGP_NODShiLtJ_G0032756.1 mouse_genomes_project 7 136858686 136888262 - Ears2 protein_coding retained_intron MGP_NODShiLtJ_T0085898.1 MGP_NODShiLtJ_G0032756.1 mouse_genomes_project 7 136858686 136888455 - MGP_NODShiLtJ_P0085898 Ears2 protein_coding protein_coding MGP_NODShiLtJ_T0087091.1 MGP_NODShiLtJ_G0033011.1 mouse_genomes_project 7 157242475 157245080 + MGP_NODShiLtJ_P0087091 Ifitm1 protein_coding protein_coding MGP_NODShiLtJ_T0087092.1 MGP_NODShiLtJ_G0033011.1 mouse_genomes_project 7 157243282 157245080 + MGP_NODShiLtJ_P0087092 Ifitm1 protein_coding protein_coding MGP_NODShiLtJ_T0087093.1 MGP_NODShiLtJ_G0033011.1 mouse_genomes_project 7 157243294 157245080 + MGP_NODShiLtJ_P0087093 Ifitm1 protein_coding protein_coding MGP_NODShiLtJ_T0010742.1 MGP_NODShiLtJ_G0008875.1 mouse_genomes_project 7 25073632 25073690 - Mir7048 miRNA miRNA MGP_NODShiLtJ_T0087051.1 MGP_NODShiLtJ_G0033002.1 mouse_genomes_project 7 157125560 157128560 - MGP_NODShiLtJ_P0087051 Bet1l protein_coding protein_coding MGP_NODShiLtJ_T0002252.1 MGP_NODShiLtJ_G0002163.1 mouse_genomes_project 7 137453135 137454482 + TEC TEC MGP_NODShiLtJ_T0083017.1 MGP_NODShiLtJ_G0031920.1 mouse_genomes_project 7 39832069 39841498 - MGP_NODShiLtJ_P0083017 Pop4 protein_coding protein_coding MGP_NODShiLtJ_T0083018.1 MGP_NODShiLtJ_G0031920.1 mouse_genomes_project 7 39834419 39841402 - MGP_NODShiLtJ_P0083018 Pop4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083019.1 MGP_NODShiLtJ_G0031920.1 mouse_genomes_project 7 39834489 39841444 - MGP_NODShiLtJ_P0083019 Pop4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083020.1 MGP_NODShiLtJ_G0031920.1 mouse_genomes_project 7 39835970 39841424 - Pop4 protein_coding retained_intron MGP_NODShiLtJ_T0083021.1 MGP_NODShiLtJ_G0031920.1 mouse_genomes_project 7 39836175 39841448 - MGP_NODShiLtJ_P0083021 Pop4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083022.1 MGP_NODShiLtJ_G0031920.1 mouse_genomes_project 7 39838455 39841355 - Pop4 protein_coding retained_intron MGP_NODShiLtJ_T0084788.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111349120 111426398 + MGP_NODShiLtJ_P0084788 Arrb1 protein_coding protein_coding MGP_NODShiLtJ_T0084789.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111349120 111426398 + MGP_NODShiLtJ_P0084789 Arrb1 protein_coding protein_coding MGP_NODShiLtJ_T0084790.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111349316 111423204 + MGP_NODShiLtJ_P0084790 Arrb1 protein_coding protein_coding MGP_NODShiLtJ_T0084791.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111349358 111407260 + MGP_NODShiLtJ_P0084791 Arrb1 protein_coding protein_coding MGP_NODShiLtJ_T0084792.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111353323 111406455 + MGP_NODShiLtJ_P0084792 Arrb1 protein_coding protein_coding MGP_NODShiLtJ_T0084793.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111390012 111406447 + Arrb1 protein_coding processed_transcript MGP_NODShiLtJ_T0084794.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111412903 111420771 + Arrb1 protein_coding retained_intron MGP_NODShiLtJ_T0084795.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111412924 111420785 + Arrb1 protein_coding retained_intron MGP_NODShiLtJ_T0084796.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111412931 111419425 + Arrb1 protein_coding retained_intron MGP_NODShiLtJ_T0084797.1 MGP_NODShiLtJ_G0032360.1 mouse_genomes_project 7 111412933 111419705 + MGP_NODShiLtJ_P0084797 Arrb1 protein_coding protein_coding MGP_NODShiLtJ_T0015551.1 MGP_NODShiLtJ_G0013659.1 mouse_genomes_project 7 489761 490062 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082388.1 MGP_NODShiLtJ_G0031791.1 mouse_genomes_project 7 29772568 29784851 - MGP_NODShiLtJ_P0082388 Kcnk6 protein_coding protein_coding MGP_NODShiLtJ_T0081830.1 MGP_NODShiLtJ_G0031651.1 mouse_genomes_project 7 24347194 24375796 + MGP_NODShiLtJ_P0081830 Phldb3 protein_coding protein_coding MGP_NODShiLtJ_T0081831.1 MGP_NODShiLtJ_G0031651.1 mouse_genomes_project 7 24347262 24361279 + MGP_NODShiLtJ_P0081831 Phldb3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081832.1 MGP_NODShiLtJ_G0031651.1 mouse_genomes_project 7 24347263 24375802 + MGP_NODShiLtJ_P0081832 Phldb3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081833.1 MGP_NODShiLtJ_G0031651.1 mouse_genomes_project 7 24347759 24375787 + MGP_NODShiLtJ_P0081833 Phldb3 protein_coding protein_coding MGP_NODShiLtJ_T0081834.1 MGP_NODShiLtJ_G0031651.1 mouse_genomes_project 7 24355153 24372951 + Phldb3 protein_coding retained_intron MGP_NODShiLtJ_T0081835.1 MGP_NODShiLtJ_G0031651.1 mouse_genomes_project 7 24355556 24358408 + Phldb3 protein_coding processed_transcript MGP_NODShiLtJ_T0010764.1 MGP_NODShiLtJ_G0008897.1 mouse_genomes_project 7 47956602 47956661 + Mir7055 miRNA miRNA MGP_NODShiLtJ_T0084433.1 MGP_NODShiLtJ_G0032255.1 mouse_genomes_project 7 90220714 90276157 - MGP_NODShiLtJ_P0084433 Hdgfrp3 protein_coding protein_coding MGP_NODShiLtJ_T0084434.1 MGP_NODShiLtJ_G0032255.1 mouse_genomes_project 7 90231447 90276143 - MGP_NODShiLtJ_P0084434 Hdgfrp3 protein_coding protein_coding MGP_NODShiLtJ_T0084435.1 MGP_NODShiLtJ_G0032255.1 mouse_genomes_project 7 90236785 90275708 - Hdgfrp3 protein_coding retained_intron MGP_NODShiLtJ_T0081158.1 MGP_NODShiLtJ_G0031415.1 mouse_genomes_project 7 3806274 3842983 + MGP_NODShiLtJ_P0081158 Gm20715 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083803.1 MGP_NODShiLtJ_G0032133.1 mouse_genomes_project 7 60994257 61011553 + MGP_NODShiLtJ_P0083803 Herc2 protein_coding protein_coding MGP_NODShiLtJ_T0083804.1 MGP_NODShiLtJ_G0032133.1 mouse_genomes_project 7 60994314 61189596 + MGP_NODShiLtJ_P0083804 Herc2 protein_coding protein_coding MGP_NODShiLtJ_T0083805.1 MGP_NODShiLtJ_G0032133.1 mouse_genomes_project 7 60994450 61189559 + MGP_NODShiLtJ_P0083805 Herc2 protein_coding protein_coding MGP_NODShiLtJ_T0083806.1 MGP_NODShiLtJ_G0032133.1 mouse_genomes_project 7 60994827 61059933 + MGP_NODShiLtJ_P0083806 Herc2 protein_coding protein_coding MGP_NODShiLtJ_T0083807.1 MGP_NODShiLtJ_G0032133.1 mouse_genomes_project 7 60994939 61188928 + MGP_NODShiLtJ_P0083807 Herc2 protein_coding protein_coding MGP_NODShiLtJ_T0083808.1 MGP_NODShiLtJ_G0032133.1 mouse_genomes_project 7 60995009 61016501 + Herc2 protein_coding retained_intron MGP_NODShiLtJ_T0083809.1 MGP_NODShiLtJ_G0032133.1 mouse_genomes_project 7 61113952 61119755 + Herc2 protein_coding processed_transcript MGP_NODShiLtJ_T0083810.1 MGP_NODShiLtJ_G0032133.1 mouse_genomes_project 7 61178295 61188897 + MGP_NODShiLtJ_P0083810 Herc2 protein_coding protein_coding MGP_NODShiLtJ_T0083207.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167585 47171256 + MGP_NODShiLtJ_P0083207 Josd2 protein_coding protein_coding MGP_NODShiLtJ_T0083208.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167611 47169784 + Josd2 protein_coding retained_intron MGP_NODShiLtJ_T0083209.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167627 47171253 + MGP_NODShiLtJ_P0083209 Josd2 protein_coding protein_coding MGP_NODShiLtJ_T0083210.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167628 47171255 + MGP_NODShiLtJ_P0083210 Josd2 protein_coding protein_coding MGP_NODShiLtJ_T0083211.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167641 47171140 + MGP_NODShiLtJ_P0083211 Josd2 protein_coding protein_coding MGP_NODShiLtJ_T0083212.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167644 47171266 + MGP_NODShiLtJ_P0083212 Josd2 protein_coding protein_coding MGP_NODShiLtJ_T0083213.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167648 47168918 + Josd2 protein_coding retained_intron MGP_NODShiLtJ_T0083214.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167650 47171252 + MGP_NODShiLtJ_P0083214 Josd2 protein_coding protein_coding MGP_NODShiLtJ_T0083215.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167655 47169040 + Josd2 protein_coding retained_intron MGP_NODShiLtJ_T0083216.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167677 47171225 + MGP_NODShiLtJ_P0083216 Josd2 protein_coding protein_coding MGP_NODShiLtJ_T0083217.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167681 47168955 + Josd2 protein_coding retained_intron MGP_NODShiLtJ_T0083218.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167690 47170780 + MGP_NODShiLtJ_P0083218 Josd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083219.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167694 47169454 + Josd2 protein_coding processed_transcript MGP_NODShiLtJ_T0083220.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167694 47171255 + MGP_NODShiLtJ_P0083220 Josd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083221.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167699 47171247 + MGP_NODShiLtJ_P0083221 Josd2 protein_coding protein_coding MGP_NODShiLtJ_T0083222.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167756 47171256 + Josd2 protein_coding retained_intron MGP_NODShiLtJ_T0083223.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47167787 47168576 + Josd2 protein_coding retained_intron MGP_NODShiLtJ_T0083224.1 MGP_NODShiLtJ_G0031980.1 mouse_genomes_project 7 47168431 47171207 + Josd2 protein_coding processed_transcript MGP_NODShiLtJ_T0005191.1 MGP_NODShiLtJ_G0004408.1 mouse_genomes_project 7 99722580 99723942 + Prss23os antisense antisense MGP_NODShiLtJ_T0005192.1 MGP_NODShiLtJ_G0004408.1 mouse_genomes_project 7 99722596 99723065 + Prss23os antisense antisense MGP_NODShiLtJ_T0082667.1 MGP_NODShiLtJ_G0031855.1 mouse_genomes_project 7 31393576 31395410 - MGP_NODShiLtJ_P0082667 Tmem147 protein_coding protein_coding MGP_NODShiLtJ_T0085134.1 MGP_NODShiLtJ_G0032475.1 mouse_genomes_project 7 115868289 115869243 - MGP_NODShiLtJ_P0085134 Olfr616 protein_coding protein_coding MGP_NODShiLtJ_T0005097.1 MGP_NODShiLtJ_G0004340.1 mouse_genomes_project 7 17207007 17336514 - antisense antisense MGP_NODShiLtJ_T0005098.1 MGP_NODShiLtJ_G0004340.1 mouse_genomes_project 7 17210341 17336558 - antisense antisense MGP_NODShiLtJ_T0010825.1 MGP_NODShiLtJ_G0008958.1 mouse_genomes_project 7 156109793 156109850 - Mir7686 miRNA miRNA MGP_NODShiLtJ_T0081715.1 MGP_NODShiLtJ_G0031606.1 mouse_genomes_project 7 19295938 19302256 + MGP_NODShiLtJ_P0081715 Gm19345 protein_coding protein_coding MGP_NODShiLtJ_T0005221.1 MGP_NODShiLtJ_G0004426.1 mouse_genomes_project 7 135622764 135625371 - antisense antisense MGP_NODShiLtJ_T0081391.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15137506 15139232 - Ccdc9 protein_coding retained_intron MGP_NODShiLtJ_T0081392.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15137509 15151557 - MGP_NODShiLtJ_P0081392 Ccdc9 protein_coding protein_coding MGP_NODShiLtJ_T0081393.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15137777 15151520 - MGP_NODShiLtJ_P0081393 Ccdc9 protein_coding protein_coding MGP_NODShiLtJ_T0081394.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15138924 15148517 - MGP_NODShiLtJ_P0081394 Ccdc9 protein_coding protein_coding MGP_NODShiLtJ_T0081395.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15138937 15144156 - Ccdc9 protein_coding retained_intron MGP_NODShiLtJ_T0081396.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15139330 15141846 - MGP_NODShiLtJ_P0081396 Ccdc9 protein_coding protein_coding MGP_NODShiLtJ_T0081397.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15139475 15140159 - Ccdc9 protein_coding retained_intron MGP_NODShiLtJ_T0081398.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15140055 15144625 - Ccdc9 protein_coding retained_intron MGP_NODShiLtJ_T0081399.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15144084 15145266 - Ccdc9 protein_coding processed_transcript MGP_NODShiLtJ_T0081400.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15145966 15151547 - MGP_NODShiLtJ_P0081400 Ccdc9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081401.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15145975 15150302 - MGP_NODShiLtJ_P0081401 Ccdc9 protein_coding protein_coding MGP_NODShiLtJ_T0081402.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15146026 15151541 - MGP_NODShiLtJ_P0081402 Ccdc9 protein_coding protein_coding MGP_NODShiLtJ_T0081403.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15146147 15151540 - Ccdc9 protein_coding retained_intron MGP_NODShiLtJ_T0081404.1 MGP_NODShiLtJ_G0031513.1 mouse_genomes_project 7 15146280 15150791 - MGP_NODShiLtJ_P0081404 Ccdc9 protein_coding protein_coding MGP_NODShiLtJ_T0015642.1 MGP_NODShiLtJ_G0013750.1 mouse_genomes_project 7 34608136 34608604 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102064.1 MGP_NODShiLtJ_G0040231.1 mouse_genomes_project 7 8534678 8535540 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084739.1 MGP_NODShiLtJ_G0032347.1 mouse_genomes_project 7 110196573 110233740 + MGP_NODShiLtJ_P0084739 Gucy2d protein_coding protein_coding MGP_NODShiLtJ_T0084740.1 MGP_NODShiLtJ_G0032347.1 mouse_genomes_project 7 110199582 110233739 + MGP_NODShiLtJ_P0084740 Gucy2d protein_coding protein_coding MGP_NODShiLtJ_T0084741.1 MGP_NODShiLtJ_G0032347.1 mouse_genomes_project 7 110223957 110231440 + MGP_NODShiLtJ_P0084741 Gucy2d protein_coding protein_coding MGP_NODShiLtJ_T0084742.1 MGP_NODShiLtJ_G0032347.1 mouse_genomes_project 7 110227792 110233739 + Gucy2d protein_coding processed_transcript MGP_NODShiLtJ_T0002254.1 MGP_NODShiLtJ_G0002165.1 mouse_genomes_project 7 137859902 137860895 - TEC TEC MGP_NODShiLtJ_T0082396.1 MGP_NODShiLtJ_G0031794.1 mouse_genomes_project 7 29811365 29839700 - MGP_NODShiLtJ_P0082396 Spint2 protein_coding protein_coding MGP_NODShiLtJ_T0082397.1 MGP_NODShiLtJ_G0031794.1 mouse_genomes_project 7 29811365 29839700 - MGP_NODShiLtJ_P0082397 Spint2 protein_coding protein_coding MGP_NODShiLtJ_T0015694.1 MGP_NODShiLtJ_G0013802.1 mouse_genomes_project 7 57087583 57087847 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102076.1 MGP_NODShiLtJ_G0040243.1 mouse_genomes_project 7 10245243 10246059 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082741.1 MGP_NODShiLtJ_G0031869.1 mouse_genomes_project 7 31722692 31725213 + Fam187b protein_coding retained_intron MGP_NODShiLtJ_T0082742.1 MGP_NODShiLtJ_G0031869.1 mouse_genomes_project 7 31722706 31738614 + MGP_NODShiLtJ_P0082742 Fam187b protein_coding protein_coding MGP_NODShiLtJ_T0082743.1 MGP_NODShiLtJ_G0031869.1 mouse_genomes_project 7 31725937 31738620 + MGP_NODShiLtJ_P0082743 Fam187b protein_coding protein_coding MGP_NODShiLtJ_T0082744.1 MGP_NODShiLtJ_G0031869.1 mouse_genomes_project 7 31730765 31738356 + MGP_NODShiLtJ_P0082744 Fam187b protein_coding protein_coding MGP_NODShiLtJ_T0005256.1 MGP_NODShiLtJ_G0004452.1 mouse_genomes_project 7 159479717 159507753 - Tspan32os antisense antisense MGP_NODShiLtJ_T0005257.1 MGP_NODShiLtJ_G0004452.1 mouse_genomes_project 7 159479717 159481524 - Tspan32os antisense antisense MGP_NODShiLtJ_T0087515.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161082547 161163803 - MGP_NODShiLtJ_P0087515 Ppfia1 protein_coding protein_coding MGP_NODShiLtJ_T0087516.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161082548 161097021 - Ppfia1 protein_coding retained_intron MGP_NODShiLtJ_T0087517.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161082555 161121516 - MGP_NODShiLtJ_P0087517 Ppfia1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087518.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161082767 161162611 - MGP_NODShiLtJ_P0087518 Ppfia1 protein_coding protein_coding MGP_NODShiLtJ_T0087519.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161090110 161094453 - Ppfia1 protein_coding processed_transcript MGP_NODShiLtJ_T0087520.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161106469 161108166 - Ppfia1 protein_coding retained_intron MGP_NODShiLtJ_T0087521.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161114452 161117214 - Ppfia1 protein_coding retained_intron MGP_NODShiLtJ_T0087522.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161128830 161162436 - MGP_NODShiLtJ_P0087522 Ppfia1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087523.1 MGP_NODShiLtJ_G0033094.1 mouse_genomes_project 7 161129855 161133943 - Ppfia1 protein_coding retained_intron MGP_NODShiLtJ_T0085971.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138195702 138288379 - MGP_NODShiLtJ_P0085971 Arhgap17 protein_coding protein_coding MGP_NODShiLtJ_T0085972.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138195755 138288414 - MGP_NODShiLtJ_P0085972 Arhgap17 protein_coding protein_coding MGP_NODShiLtJ_T0085973.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138195755 138288414 - MGP_NODShiLtJ_P0085973 Arhgap17 protein_coding protein_coding MGP_NODShiLtJ_T0085974.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138195759 138288406 - MGP_NODShiLtJ_P0085974 Arhgap17 protein_coding protein_coding MGP_NODShiLtJ_T0085975.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138195764 138288431 - MGP_NODShiLtJ_P0085975 Arhgap17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085976.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138195864 138288413 - MGP_NODShiLtJ_P0085976 Arhgap17 protein_coding protein_coding MGP_NODShiLtJ_T0085977.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138199438 138202743 - Arhgap17 protein_coding retained_intron MGP_NODShiLtJ_T0085978.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138203484 138213081 - Arhgap17 protein_coding retained_intron MGP_NODShiLtJ_T0085979.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138211769 138288443 - Arhgap17 protein_coding retained_intron MGP_NODShiLtJ_T0085980.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138239956 138288443 - MGP_NODShiLtJ_P0085980 Arhgap17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085981.1 MGP_NODShiLtJ_G0032769.1 mouse_genomes_project 7 138287293 138288404 - Arhgap17 protein_coding retained_intron MGP_NODShiLtJ_T0015786.1 MGP_NODShiLtJ_G0013894.1 mouse_genomes_project 7 137088671 137089395 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102137.1 MGP_NODShiLtJ_G0040303.1 mouse_genomes_project 7 46786291 46788664 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081320.1 MGP_NODShiLtJ_G0031487.1 mouse_genomes_project 7 12316882 12446772 - MGP_NODShiLtJ_P0081320 Sult2a2 protein_coding protein_coding MGP_NODShiLtJ_T0083677.1 MGP_NODShiLtJ_G0032097.1 mouse_genomes_project 7 50029281 50034588 + MGP_NODShiLtJ_P0083677 Tmem86a protein_coding protein_coding MGP_NODShiLtJ_T0008886.1 MGP_NODShiLtJ_G0007159.1 mouse_genomes_project 7 103796390 103825376 - Gm9934 lincRNA lincRNA MGP_NODShiLtJ_T0008887.1 MGP_NODShiLtJ_G0007159.1 mouse_genomes_project 7 103811685 103825144 - Gm9934 lincRNA lincRNA MGP_NODShiLtJ_T0008863.1 MGP_NODShiLtJ_G0007146.1 mouse_genomes_project 7 87684689 87686034 - Gm45168 lincRNA lincRNA MGP_NODShiLtJ_T0008864.1 MGP_NODShiLtJ_G0007146.1 mouse_genomes_project 7 87684830 87686045 - Gm45168 lincRNA lincRNA MGP_NODShiLtJ_T0008888.1 MGP_NODShiLtJ_G0007160.1 mouse_genomes_project 7 105072559 105473106 + lincRNA lincRNA MGP_NODShiLtJ_T0008889.1 MGP_NODShiLtJ_G0007160.1 mouse_genomes_project 7 105072620 106021701 + lincRNA lincRNA MGP_NODShiLtJ_T0086901.1 MGP_NODShiLtJ_G0032949.1 mouse_genomes_project 7 154912027 154924861 - MGP_NODShiLtJ_P0086901 Mapk1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0086902.1 MGP_NODShiLtJ_G0032949.1 mouse_genomes_project 7 154912037 154924848 - MGP_NODShiLtJ_P0086902 Mapk1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0086903.1 MGP_NODShiLtJ_G0032949.1 mouse_genomes_project 7 154912082 154924845 - MGP_NODShiLtJ_P0086903 Mapk1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0099482.1 MGP_NODShiLtJ_G0037876.1 mouse_genomes_project 7 41304324 41304435 + Gm26327 snRNA snRNA MGP_NODShiLtJ_T0087030.1 MGP_NODShiLtJ_G0032988.1 mouse_genomes_project 7 156694096 156701731 - MGP_NODShiLtJ_P0087030 Olfr536 protein_coding protein_coding MGP_NODShiLtJ_T0083947.1 MGP_NODShiLtJ_G0032165.1 mouse_genomes_project 7 72633215 72644034 + MGP_NODShiLtJ_P0083947 Vimp protein_coding protein_coding MGP_NODShiLtJ_T0083948.1 MGP_NODShiLtJ_G0032165.1 mouse_genomes_project 7 72633243 72642080 + Vimp protein_coding retained_intron MGP_NODShiLtJ_T0083949.1 MGP_NODShiLtJ_G0032165.1 mouse_genomes_project 7 72633244 72644032 + MGP_NODShiLtJ_P0083949 Vimp protein_coding protein_coding MGP_NODShiLtJ_T0083950.1 MGP_NODShiLtJ_G0032165.1 mouse_genomes_project 7 72633253 72643751 + MGP_NODShiLtJ_P0083950 Vimp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083951.1 MGP_NODShiLtJ_G0032165.1 mouse_genomes_project 7 72633280 72644041 + MGP_NODShiLtJ_P0083951 Vimp protein_coding protein_coding MGP_NODShiLtJ_T0083672.1 MGP_NODShiLtJ_G0032094.1 mouse_genomes_project 7 49884813 49924817 - MGP_NODShiLtJ_P0083672 Uevld protein_coding protein_coding MGP_NODShiLtJ_T0015684.1 MGP_NODShiLtJ_G0013792.1 mouse_genomes_project 7 46511042 46511347 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084807.1 MGP_NODShiLtJ_G0032365.1 mouse_genomes_project 7 111656744 111678410 - MGP_NODShiLtJ_P0084807 Neu3 protein_coding protein_coding MGP_NODShiLtJ_T0087400.1 MGP_NODShiLtJ_G0033069.1 mouse_genomes_project 7 159158785 159159815 - MGP_NODShiLtJ_P0087400 Ins2 protein_coding protein_coding MGP_NODShiLtJ_T0087401.1 MGP_NODShiLtJ_G0033069.1 mouse_genomes_project 7 159158785 159179644 - MGP_NODShiLtJ_P0087401 Ins2 protein_coding protein_coding MGP_NODShiLtJ_T0087402.1 MGP_NODShiLtJ_G0033069.1 mouse_genomes_project 7 159158788 159159856 - MGP_NODShiLtJ_P0087402 Ins2 protein_coding protein_coding MGP_NODShiLtJ_T0087403.1 MGP_NODShiLtJ_G0033069.1 mouse_genomes_project 7 159158788 159159828 - MGP_NODShiLtJ_P0087403 Ins2 protein_coding protein_coding MGP_NODShiLtJ_T0087404.1 MGP_NODShiLtJ_G0033069.1 mouse_genomes_project 7 159158788 159159822 - MGP_NODShiLtJ_P0087404 Ins2 protein_coding protein_coding MGP_NODShiLtJ_T0087405.1 MGP_NODShiLtJ_G0033069.1 mouse_genomes_project 7 159158790 159159847 - MGP_NODShiLtJ_P0087405 Ins2 protein_coding protein_coding MGP_NODShiLtJ_T0087406.1 MGP_NODShiLtJ_G0033069.1 mouse_genomes_project 7 159158838 159159710 - MGP_NODShiLtJ_P0087406 Ins2 protein_coding protein_coding MGP_NODShiLtJ_T0087407.1 MGP_NODShiLtJ_G0033069.1 mouse_genomes_project 7 159158842 159159663 - MGP_NODShiLtJ_P0087407 Ins2 protein_coding protein_coding MGP_NODShiLtJ_T0087025.1 MGP_NODShiLtJ_G0032983.1 mouse_genomes_project 7 156567152 156568232 - MGP_NODShiLtJ_P0087025 Olfr530 protein_coding protein_coding MGP_NODShiLtJ_T0081739.1 MGP_NODShiLtJ_G0031625.1 mouse_genomes_project 7 23596621 23597384 + MGP_NODShiLtJ_P0081739 protein_coding protein_coding MGP_NODShiLtJ_T0081738.1 MGP_NODShiLtJ_G0031624.1 mouse_genomes_project 7 23567533 23634971 + MGP_NODShiLtJ_P0081738 protein_coding protein_coding MGP_NODShiLtJ_T0002266.1 MGP_NODShiLtJ_G0002177.1 mouse_genomes_project 7 143169506 143170215 + TEC TEC MGP_NODShiLtJ_T0081736.1 MGP_NODShiLtJ_G0031622.1 mouse_genomes_project 7 23529849 23530764 + MGP_NODShiLtJ_P0081736 Vmn1r178 protein_coding protein_coding MGP_NODShiLtJ_T0086377.1 MGP_NODShiLtJ_G0032839.1 mouse_genomes_project 7 142493611 142538737 + MGP_NODShiLtJ_P0086377 Itgal protein_coding protein_coding MGP_NODShiLtJ_T0086378.1 MGP_NODShiLtJ_G0032839.1 mouse_genomes_project 7 142493642 142538738 + MGP_NODShiLtJ_P0086378 Itgal protein_coding protein_coding MGP_NODShiLtJ_T0086379.1 MGP_NODShiLtJ_G0032839.1 mouse_genomes_project 7 142493666 142534047 + MGP_NODShiLtJ_P0086379 Itgal protein_coding protein_coding MGP_NODShiLtJ_T0086380.1 MGP_NODShiLtJ_G0032839.1 mouse_genomes_project 7 142493761 142537328 + MGP_NODShiLtJ_P0086380 Itgal protein_coding protein_coding MGP_NODShiLtJ_T0086381.1 MGP_NODShiLtJ_G0032839.1 mouse_genomes_project 7 142494781 142498796 + Itgal protein_coding processed_transcript MGP_NODShiLtJ_T0086382.1 MGP_NODShiLtJ_G0032839.1 mouse_genomes_project 7 142510366 142538737 + MGP_NODShiLtJ_P0086382 Itgal protein_coding protein_coding MGP_NODShiLtJ_T0015771.1 MGP_NODShiLtJ_G0013879.1 mouse_genomes_project 7 117155801 117156163 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002224.1 MGP_NODShiLtJ_G0002135.1 mouse_genomes_project 7 86979841 86981474 - TEC TEC MGP_NODShiLtJ_T0086650.1 MGP_NODShiLtJ_G0032891.1 mouse_genomes_project 7 143892162 143920909 + MGP_NODShiLtJ_P0086650 Bag3 protein_coding protein_coding MGP_NODShiLtJ_T0084342.1 MGP_NODShiLtJ_G0032235.1 mouse_genomes_project 7 88934987 89041418 - MGP_NODShiLtJ_P0084342 Iqgap1 protein_coding protein_coding MGP_NODShiLtJ_T0084343.1 MGP_NODShiLtJ_G0032235.1 mouse_genomes_project 7 88951156 88954628 - MGP_NODShiLtJ_P0084343 Iqgap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084344.1 MGP_NODShiLtJ_G0032235.1 mouse_genomes_project 7 88965482 88968259 - Iqgap1 protein_coding retained_intron MGP_NODShiLtJ_T0084345.1 MGP_NODShiLtJ_G0032235.1 mouse_genomes_project 7 88974516 89041265 - Iqgap1 protein_coding retained_intron MGP_NODShiLtJ_T0084346.1 MGP_NODShiLtJ_G0032235.1 mouse_genomes_project 7 88980010 89041283 - Iqgap1 protein_coding retained_intron MGP_NODShiLtJ_T0084347.1 MGP_NODShiLtJ_G0032235.1 mouse_genomes_project 7 88988355 89054829 - MGP_NODShiLtJ_P0084347 Iqgap1 protein_coding protein_coding MGP_NODShiLtJ_T0084348.1 MGP_NODShiLtJ_G0032235.1 mouse_genomes_project 7 88994175 89063968 - MGP_NODShiLtJ_P0084348 Iqgap1 protein_coding protein_coding MGP_NODShiLtJ_T0084349.1 MGP_NODShiLtJ_G0032235.1 mouse_genomes_project 7 89031365 89041274 - Iqgap1 protein_coding retained_intron MGP_NODShiLtJ_T0008831.1 MGP_NODShiLtJ_G0007125.1 mouse_genomes_project 7 80440554 80444873 - Gm6567 lincRNA lincRNA MGP_NODShiLtJ_T0085156.1 MGP_NODShiLtJ_G0032495.1 mouse_genomes_project 7 116406767 116407727 + MGP_NODShiLtJ_P0085156 Olfr631 protein_coding protein_coding MGP_NODShiLtJ_T0083386.1 MGP_NODShiLtJ_G0032026.1 mouse_genomes_project 7 47993945 47998304 - MGP_NODShiLtJ_P0083386 Dkkl1 protein_coding protein_coding MGP_NODShiLtJ_T0081671.1 MGP_NODShiLtJ_G0031597.1 mouse_genomes_project 7 19085060 19089300 - MGP_NODShiLtJ_P0081671 protein_coding protein_coding MGP_NODShiLtJ_T0081672.1 MGP_NODShiLtJ_G0031597.1 mouse_genomes_project 7 19085065 19086325 - MGP_NODShiLtJ_P0081672 protein_coding protein_coding MGP_NODShiLtJ_T0081673.1 MGP_NODShiLtJ_G0031597.1 mouse_genomes_project 7 19085065 19093881 - MGP_NODShiLtJ_P0081673 protein_coding protein_coding MGP_NODShiLtJ_T0081674.1 MGP_NODShiLtJ_G0031597.1 mouse_genomes_project 7 19085065 19090388 - MGP_NODShiLtJ_P0081674 protein_coding protein_coding MGP_NODShiLtJ_T0081675.1 MGP_NODShiLtJ_G0031597.1 mouse_genomes_project 7 19085688 19093894 - MGP_NODShiLtJ_P0081675 protein_coding protein_coding MGP_NODShiLtJ_T0086266.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142050616 142056185 - MGP_NODShiLtJ_P0086266 Tmem219 protein_coding protein_coding MGP_NODShiLtJ_T0086267.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142050663 142061849 - MGP_NODShiLtJ_P0086267 Tmem219 protein_coding protein_coding MGP_NODShiLtJ_T0086268.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142050665 142053732 - Tmem219 protein_coding retained_intron MGP_NODShiLtJ_T0086269.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142050665 142092292 - MGP_NODShiLtJ_P0086269 Tmem219 protein_coding protein_coding MGP_NODShiLtJ_T0086270.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142050665 142062678 - MGP_NODShiLtJ_P0086270 Tmem219 protein_coding protein_coding MGP_NODShiLtJ_T0086271.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142050665 142062701 - MGP_NODShiLtJ_P0086271 Tmem219 protein_coding protein_coding MGP_NODShiLtJ_T0086272.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142050667 142061301 - MGP_NODShiLtJ_P0086272 Tmem219 protein_coding protein_coding MGP_NODShiLtJ_T0086273.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142053451 142092294 - MGP_NODShiLtJ_P0086273 Tmem219 protein_coding protein_coding MGP_NODShiLtJ_T0086274.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142055409 142062706 - Tmem219 protein_coding retained_intron MGP_NODShiLtJ_T0086275.1 MGP_NODShiLtJ_G0032815.1 mouse_genomes_project 7 142056031 142092277 - MGP_NODShiLtJ_P0086275 Tmem219 protein_coding protein_coding MGP_NODShiLtJ_T0005165.1 MGP_NODShiLtJ_G0004388.1 mouse_genomes_project 7 61199967 61200932 - Gm44506 antisense antisense MGP_NODShiLtJ_T0008811.1 MGP_NODShiLtJ_G0007110.1 mouse_genomes_project 7 74474224 74493999 - 4833412C05Rik lincRNA lincRNA MGP_NODShiLtJ_T0084806.1 MGP_NODShiLtJ_G0032364.1 mouse_genomes_project 7 111602570 111603251 + MGP_NODShiLtJ_P0084806 protein_coding protein_coding MGP_NODShiLtJ_T0099520.1 MGP_NODShiLtJ_G0037914.1 mouse_genomes_project 7 138303409 138303512 - Gm23559 snRNA snRNA MGP_NODShiLtJ_T0082323.1 MGP_NODShiLtJ_G0031778.1 mouse_genomes_project 7 29314734 29321206 + Ech1 protein_coding retained_intron MGP_NODShiLtJ_T0082324.1 MGP_NODShiLtJ_G0031778.1 mouse_genomes_project 7 29314734 29323311 + MGP_NODShiLtJ_P0082324 Ech1 protein_coding protein_coding MGP_NODShiLtJ_T0082325.1 MGP_NODShiLtJ_G0031778.1 mouse_genomes_project 7 29314866 29316174 + Ech1 protein_coding retained_intron MGP_NODShiLtJ_T0082326.1 MGP_NODShiLtJ_G0031778.1 mouse_genomes_project 7 29315475 29322297 + Ech1 protein_coding processed_transcript MGP_NODShiLtJ_T0082327.1 MGP_NODShiLtJ_G0031778.1 mouse_genomes_project 7 29315721 29323311 + MGP_NODShiLtJ_P0082327 Ech1 protein_coding protein_coding MGP_NODShiLtJ_T0082328.1 MGP_NODShiLtJ_G0031778.1 mouse_genomes_project 7 29321214 29323311 + Ech1 protein_coding retained_intron MGP_NODShiLtJ_T0082329.1 MGP_NODShiLtJ_G0031778.1 mouse_genomes_project 7 29322314 29323311 + Ech1 protein_coding retained_intron MGP_NODShiLtJ_T0015787.1 MGP_NODShiLtJ_G0013895.1 mouse_genomes_project 7 137350419 137350660 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082635.1 MGP_NODShiLtJ_G0031845.1 mouse_genomes_project 7 31227738 31249246 - MGP_NODShiLtJ_P0082635 Kmt2b protein_coding protein_coding MGP_NODShiLtJ_T0082636.1 MGP_NODShiLtJ_G0031845.1 mouse_genomes_project 7 31227738 31249255 - MGP_NODShiLtJ_P0082636 Kmt2b protein_coding protein_coding MGP_NODShiLtJ_T0082637.1 MGP_NODShiLtJ_G0031845.1 mouse_genomes_project 7 31227740 31245863 - MGP_NODShiLtJ_P0082637 Kmt2b protein_coding protein_coding MGP_NODShiLtJ_T0082638.1 MGP_NODShiLtJ_G0031845.1 mouse_genomes_project 7 31228633 31229545 - Kmt2b protein_coding retained_intron MGP_NODShiLtJ_T0082639.1 MGP_NODShiLtJ_G0031845.1 mouse_genomes_project 7 31232049 31233055 - Kmt2b protein_coding retained_intron MGP_NODShiLtJ_T0082640.1 MGP_NODShiLtJ_G0031845.1 mouse_genomes_project 7 31234453 31236045 - Kmt2b protein_coding processed_transcript MGP_NODShiLtJ_T0082641.1 MGP_NODShiLtJ_G0031845.1 mouse_genomes_project 7 31235910 31237875 - Kmt2b protein_coding processed_transcript MGP_NODShiLtJ_T0082642.1 MGP_NODShiLtJ_G0031845.1 mouse_genomes_project 7 31244803 31245597 - Kmt2b protein_coding processed_transcript MGP_NODShiLtJ_T0097828.1 MGP_NODShiLtJ_G0036240.1 mouse_genomes_project 7 113898579 113899192 + pseudogene pseudogene MGP_NODShiLtJ_T0002156.1 MGP_NODShiLtJ_G0002068.1 mouse_genomes_project 7 31976184 31976942 + TEC TEC MGP_NODShiLtJ_T0082179.1 MGP_NODShiLtJ_G0031736.1 mouse_genomes_project 7 28046065 28071104 + MGP_NODShiLtJ_P0082179 Zfp60 protein_coding protein_coding MGP_NODShiLtJ_T0082180.1 MGP_NODShiLtJ_G0031736.1 mouse_genomes_project 7 28046087 28059774 + Zfp60 protein_coding retained_intron MGP_NODShiLtJ_T0082181.1 MGP_NODShiLtJ_G0031736.1 mouse_genomes_project 7 28046108 28065611 + MGP_NODShiLtJ_P0082181 Zfp60 protein_coding protein_coding MGP_NODShiLtJ_T0082182.1 MGP_NODShiLtJ_G0031736.1 mouse_genomes_project 7 28046119 28065934 + MGP_NODShiLtJ_P0082182 Zfp60 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082183.1 MGP_NODShiLtJ_G0031736.1 mouse_genomes_project 7 28046187 28067849 + MGP_NODShiLtJ_P0082183 Zfp60 protein_coding protein_coding MGP_NODShiLtJ_T0082184.1 MGP_NODShiLtJ_G0031736.1 mouse_genomes_project 7 28055639 28056140 + Zfp60 protein_coding retained_intron MGP_NODShiLtJ_T0082185.1 MGP_NODShiLtJ_G0031736.1 mouse_genomes_project 7 28055639 28067411 + MGP_NODShiLtJ_P0082185 Zfp60 protein_coding protein_coding MGP_NODShiLtJ_T0086611.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143586874 143587934 + Slc5a2 protein_coding retained_intron MGP_NODShiLtJ_T0086612.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143586893 143593474 + MGP_NODShiLtJ_P0086612 Slc5a2 protein_coding protein_coding MGP_NODShiLtJ_T0086613.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143586895 143593264 + MGP_NODShiLtJ_P0086613 Slc5a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086614.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143586900 143590358 + MGP_NODShiLtJ_P0086614 Slc5a2 protein_coding protein_coding MGP_NODShiLtJ_T0086615.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143586912 143590362 + MGP_NODShiLtJ_P0086615 Slc5a2 protein_coding protein_coding MGP_NODShiLtJ_T0086616.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143587516 143591098 + MGP_NODShiLtJ_P0086616 Slc5a2 protein_coding protein_coding MGP_NODShiLtJ_T0086617.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143587559 143588695 + MGP_NODShiLtJ_P0086617 Slc5a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086618.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143587586 143587991 + Slc5a2 protein_coding retained_intron MGP_NODShiLtJ_T0086619.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143588174 143590211 + Slc5a2 protein_coding retained_intron MGP_NODShiLtJ_T0086620.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143588607 143591021 + MGP_NODShiLtJ_P0086620 Slc5a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086621.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143590171 143593231 + MGP_NODShiLtJ_P0086621 Slc5a2 protein_coding protein_coding MGP_NODShiLtJ_T0086622.1 MGP_NODShiLtJ_G0032887.1 mouse_genomes_project 7 143591613 143593231 + MGP_NODShiLtJ_P0086622 Slc5a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0008814.1 MGP_NODShiLtJ_G0007112.1 mouse_genomes_project 7 75003629 75098642 + lincRNA lincRNA MGP_NODShiLtJ_T0008815.1 MGP_NODShiLtJ_G0007112.1 mouse_genomes_project 7 75006105 75089189 + lincRNA lincRNA MGP_NODShiLtJ_T0008816.1 MGP_NODShiLtJ_G0007112.1 mouse_genomes_project 7 75035494 75098640 + lincRNA lincRNA MGP_NODShiLtJ_T0008817.1 MGP_NODShiLtJ_G0007112.1 mouse_genomes_project 7 75066624 75089268 + lincRNA lincRNA MGP_NODShiLtJ_T0008788.1 MGP_NODShiLtJ_G0007091.1 mouse_genomes_project 7 46172742 46173100 + Gm44818 lincRNA lincRNA MGP_NODShiLtJ_T0086651.1 MGP_NODShiLtJ_G0032892.1 mouse_genomes_project 7 143986757 144049652 + Inpp5f protein_coding processed_transcript MGP_NODShiLtJ_T0086652.1 MGP_NODShiLtJ_G0032892.1 mouse_genomes_project 7 143986789 144075206 + MGP_NODShiLtJ_P0086652 Inpp5f protein_coding protein_coding MGP_NODShiLtJ_T0086653.1 MGP_NODShiLtJ_G0032892.1 mouse_genomes_project 7 144037024 144055505 + Inpp5f protein_coding retained_intron MGP_NODShiLtJ_T0086654.1 MGP_NODShiLtJ_G0032892.1 mouse_genomes_project 7 144041712 144046610 + Inpp5f protein_coding processed_transcript MGP_NODShiLtJ_T0086655.1 MGP_NODShiLtJ_G0032892.1 mouse_genomes_project 7 144045729 144046815 + Inpp5f protein_coding retained_intron MGP_NODShiLtJ_T0086656.1 MGP_NODShiLtJ_G0032892.1 mouse_genomes_project 7 144057713 144075055 + Inpp5f protein_coding retained_intron MGP_NODShiLtJ_T0086657.1 MGP_NODShiLtJ_G0032892.1 mouse_genomes_project 7 144067263 144072432 + MGP_NODShiLtJ_P0086657 Inpp5f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086658.1 MGP_NODShiLtJ_G0032892.1 mouse_genomes_project 7 144068022 144075057 + MGP_NODShiLtJ_P0086658 Inpp5f protein_coding protein_coding MGP_NODShiLtJ_T0018236.1 MGP_NODShiLtJ_G0015547.1 mouse_genomes_project 7 108529264 108567191 - C230038L03Rik processed_transcript antisense MGP_NODShiLtJ_T0018237.1 MGP_NODShiLtJ_G0015547.1 mouse_genomes_project 7 108541184 108570299 - C230038L03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018238.1 MGP_NODShiLtJ_G0015547.1 mouse_genomes_project 7 108567734 108571639 - C230038L03Rik processed_transcript antisense MGP_NODShiLtJ_T0018239.1 MGP_NODShiLtJ_G0015547.1 mouse_genomes_project 7 108568066 108572045 - C230038L03Rik processed_transcript antisense MGP_NODShiLtJ_T0081088.1 MGP_NODShiLtJ_G0031384.1 mouse_genomes_project 7 2175660 2188200 - Zfp579 protein_coding processed_transcript MGP_NODShiLtJ_T0081089.1 MGP_NODShiLtJ_G0031384.1 mouse_genomes_project 7 2184996 2188303 - Zfp579 protein_coding processed_transcript MGP_NODShiLtJ_T0081090.1 MGP_NODShiLtJ_G0031384.1 mouse_genomes_project 7 2184996 2187485 - MGP_NODShiLtJ_P0081090 Zfp579 protein_coding protein_coding MGP_NODShiLtJ_T0081091.1 MGP_NODShiLtJ_G0031384.1 mouse_genomes_project 7 2184998 2188246 - MGP_NODShiLtJ_P0081091 Zfp579 protein_coding protein_coding MGP_NODShiLtJ_T0081092.1 MGP_NODShiLtJ_G0031384.1 mouse_genomes_project 7 2186345 2188230 - MGP_NODShiLtJ_P0081092 Zfp579 protein_coding protein_coding MGP_NODShiLtJ_T0081093.1 MGP_NODShiLtJ_G0031384.1 mouse_genomes_project 7 2187155 2188174 - Zfp579 protein_coding processed_transcript MGP_NODShiLtJ_T0083152.1 MGP_NODShiLtJ_G0031969.1 mouse_genomes_project 7 46591331 46597217 + MGP_NODShiLtJ_P0083152 Klk15 protein_coding protein_coding MGP_NODShiLtJ_T0083153.1 MGP_NODShiLtJ_G0031969.1 mouse_genomes_project 7 46591384 46596308 + MGP_NODShiLtJ_P0083153 Klk15 protein_coding protein_coding MGP_NODShiLtJ_T0005217.1 MGP_NODShiLtJ_G0004424.1 mouse_genomes_project 7 130265266 130265838 + Sox6os antisense antisense MGP_NODShiLtJ_T0102176.1 MGP_NODShiLtJ_G0040342.1 mouse_genomes_project 7 94824975 94825295 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087028.1 MGP_NODShiLtJ_G0032986.1 mouse_genomes_project 7 156658615 156659667 + MGP_NODShiLtJ_P0087028 Olfr533 protein_coding protein_coding MGP_NODShiLtJ_T0005081.1 MGP_NODShiLtJ_G0004332.1 mouse_genomes_project 7 593312 597336 + Gm15929 antisense antisense MGP_NODShiLtJ_T0102124.1 MGP_NODShiLtJ_G0040290.1 mouse_genomes_project 7 36707596 36711032 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010739.1 MGP_NODShiLtJ_G0008872.1 mouse_genomes_project 7 24788596 24788662 - Mir7046 miRNA miRNA MGP_NODShiLtJ_T0083030.1 MGP_NODShiLtJ_G0031925.1 mouse_genomes_project 7 43274021 43298732 - MGP_NODShiLtJ_P0083030 AI987944 protein_coding protein_coding MGP_NODShiLtJ_T0083031.1 MGP_NODShiLtJ_G0031925.1 mouse_genomes_project 7 43274021 43298680 - MGP_NODShiLtJ_P0083031 AI987944 protein_coding protein_coding MGP_NODShiLtJ_T0083032.1 MGP_NODShiLtJ_G0031925.1 mouse_genomes_project 7 43274693 43298799 - MGP_NODShiLtJ_P0083032 AI987944 protein_coding protein_coding MGP_NODShiLtJ_T0085404.1 MGP_NODShiLtJ_G0032624.1 mouse_genomes_project 7 121836030 121836975 - MGP_NODShiLtJ_P0085404 Olfr493 protein_coding protein_coding MGP_NODShiLtJ_T0086771.1 MGP_NODShiLtJ_G0032916.1 mouse_genomes_project 7 147637917 147672368 + MGP_NODShiLtJ_P0086771 Gpr26 protein_coding protein_coding MGP_NODShiLtJ_T0099501.1 MGP_NODShiLtJ_G0037895.1 mouse_genomes_project 7 101691731 101691834 + Gm24552 snRNA snRNA MGP_NODShiLtJ_T0018209.1 MGP_NODShiLtJ_G0015535.1 mouse_genomes_project 7 52649289 52657270 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018210.1 MGP_NODShiLtJ_G0015535.1 mouse_genomes_project 7 52652631 52657917 + processed_transcript processed_transcript MGP_NODShiLtJ_T0099508.1 MGP_NODShiLtJ_G0037902.1 mouse_genomes_project 7 116942575 116942675 - Gm27995 snRNA snRNA MGP_NODShiLtJ_T0010760.1 MGP_NODShiLtJ_G0008893.1 mouse_genomes_project 7 47610307 47610380 + Mir707 miRNA miRNA MGP_NODShiLtJ_T0083089.1 MGP_NODShiLtJ_G0031947.1 mouse_genomes_project 7 46046982 46068601 + MGP_NODShiLtJ_P0083089 Gm45233 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083091.1 MGP_NODShiLtJ_G0031947.1 mouse_genomes_project 7 46046985 46068684 + MGP_NODShiLtJ_P0083091 Gm45233 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015738.1 MGP_NODShiLtJ_G0013846.1 mouse_genomes_project 7 91387895 91388327 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084726.1 MGP_NODShiLtJ_G0032344.1 mouse_genomes_project 7 109926857 109933921 - MGP_NODShiLtJ_P0084726 B3gnt6 protein_coding protein_coding MGP_NODShiLtJ_T0084565.1 MGP_NODShiLtJ_G0032309.1 mouse_genomes_project 7 100110104 100136951 - MGP_NODShiLtJ_P0084565 l7Rn6 protein_coding protein_coding MGP_NODShiLtJ_T0084566.1 MGP_NODShiLtJ_G0032309.1 mouse_genomes_project 7 100112098 100136830 - MGP_NODShiLtJ_P0084566 l7Rn6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084567.1 MGP_NODShiLtJ_G0032309.1 mouse_genomes_project 7 100112315 100136848 - MGP_NODShiLtJ_P0084567 l7Rn6 protein_coding protein_coding MGP_NODShiLtJ_T0084568.1 MGP_NODShiLtJ_G0032309.1 mouse_genomes_project 7 100112967 100118657 - l7Rn6 protein_coding retained_intron MGP_NODShiLtJ_T0084569.1 MGP_NODShiLtJ_G0032309.1 mouse_genomes_project 7 100125366 100136929 - l7Rn6 protein_coding processed_transcript MGP_NODShiLtJ_T0083056.1 MGP_NODShiLtJ_G0031935.1 mouse_genomes_project 7 44528182 44547460 + protein_coding processed_transcript MGP_NODShiLtJ_T0081198.1 MGP_NODShiLtJ_G0031442.1 mouse_genomes_project 7 9752784 9753696 + MGP_NODShiLtJ_P0081198 Vmn1r73 protein_coding protein_coding MGP_NODShiLtJ_T0100781.1 MGP_NODShiLtJ_G0039175.1 mouse_genomes_project 7 139118029 139118158 + Gm25759 snoRNA snoRNA MGP_NODShiLtJ_T0087029.1 MGP_NODShiLtJ_G0032987.1 mouse_genomes_project 7 156684729 156685720 + MGP_NODShiLtJ_P0087029 Olfr535 protein_coding protein_coding MGP_NODShiLtJ_T0100744.1 MGP_NODShiLtJ_G0039138.1 mouse_genomes_project 7 64798572 64798641 - Gm25499 snoRNA snoRNA MGP_NODShiLtJ_T0010717.1 MGP_NODShiLtJ_G0008850.1 mouse_genomes_project 7 131854 131912 - Mir290b miRNA miRNA MGP_NODShiLtJ_T0085626.1 MGP_NODShiLtJ_G0032693.1 mouse_genomes_project 7 128861782 128866496 + MGP_NODShiLtJ_P0085626 Calcb protein_coding protein_coding MGP_NODShiLtJ_T0085627.1 MGP_NODShiLtJ_G0032693.1 mouse_genomes_project 7 128861814 128866194 + MGP_NODShiLtJ_P0085627 Calcb protein_coding protein_coding MGP_NODShiLtJ_T0085628.1 MGP_NODShiLtJ_G0032693.1 mouse_genomes_project 7 128862649 128863278 + MGP_NODShiLtJ_P0085628 Calcb protein_coding protein_coding MGP_NODShiLtJ_T0085098.1 MGP_NODShiLtJ_G0032441.1 mouse_genomes_project 7 115086213 115087258 + MGP_NODShiLtJ_P0085098 Olfr570 protein_coding protein_coding MGP_NODShiLtJ_T0082172.1 MGP_NODShiLtJ_G0031734.1 mouse_genomes_project 7 27976439 27994645 - MGP_NODShiLtJ_P0082172 Map3k10 protein_coding protein_coding MGP_NODShiLtJ_T0082173.1 MGP_NODShiLtJ_G0031734.1 mouse_genomes_project 7 27976728 27994649 - MGP_NODShiLtJ_P0082173 Map3k10 protein_coding protein_coding MGP_NODShiLtJ_T0082174.1 MGP_NODShiLtJ_G0031734.1 mouse_genomes_project 7 27984210 27985160 - Map3k10 protein_coding retained_intron MGP_NODShiLtJ_T0082175.1 MGP_NODShiLtJ_G0031734.1 mouse_genomes_project 7 27984232 27994408 - Map3k10 protein_coding retained_intron MGP_NODShiLtJ_T0082176.1 MGP_NODShiLtJ_G0031734.1 mouse_genomes_project 7 27988200 27994632 - MGP_NODShiLtJ_P0082176 Map3k10 protein_coding protein_coding MGP_NODShiLtJ_T0081007.1 MGP_NODShiLtJ_G0031362.1 mouse_genomes_project 7 1635478 1702944 - MGP_NODShiLtJ_P0081007 Ptprh protein_coding protein_coding MGP_NODShiLtJ_T0081008.1 MGP_NODShiLtJ_G0031362.1 mouse_genomes_project 7 1639147 1649134 - Ptprh protein_coding retained_intron MGP_NODShiLtJ_T0081009.1 MGP_NODShiLtJ_G0031362.1 mouse_genomes_project 7 1695706 1702042 - Ptprh protein_coding processed_transcript MGP_NODShiLtJ_T0102174.1 MGP_NODShiLtJ_G0040340.1 mouse_genomes_project 7 94763222 94920471 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083103.1 MGP_NODShiLtJ_G0031950.1 mouse_genomes_project 7 46100949 46115137 - MGP_NODShiLtJ_P0083103 4931406B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0083104.1 MGP_NODShiLtJ_G0031950.1 mouse_genomes_project 7 46103016 46114831 - MGP_NODShiLtJ_P0083104 4931406B18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083105.1 MGP_NODShiLtJ_G0031950.1 mouse_genomes_project 7 46103762 46115126 - MGP_NODShiLtJ_P0083105 4931406B18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083106.1 MGP_NODShiLtJ_G0031950.1 mouse_genomes_project 7 46105874 46113433 - MGP_NODShiLtJ_P0083106 4931406B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0083107.1 MGP_NODShiLtJ_G0031950.1 mouse_genomes_project 7 46106957 46115132 - 4931406B18Rik protein_coding retained_intron MGP_NODShiLtJ_T0083108.1 MGP_NODShiLtJ_G0031950.1 mouse_genomes_project 7 46107605 46115139 - MGP_NODShiLtJ_P0083108 4931406B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0083109.1 MGP_NODShiLtJ_G0031950.1 mouse_genomes_project 7 46110449 46114893 - MGP_NODShiLtJ_P0083109 4931406B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0085129.1 MGP_NODShiLtJ_G0032470.1 mouse_genomes_project 7 115752606 115753566 - MGP_NODShiLtJ_P0085129 Olfr609 protein_coding protein_coding MGP_NODShiLtJ_T0015623.1 MGP_NODShiLtJ_G0013731.1 mouse_genomes_project 7 27397318 27397575 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008743.1 MGP_NODShiLtJ_G0007056.1 mouse_genomes_project 7 29593333 29602929 + Gm26604 lincRNA lincRNA MGP_NODShiLtJ_T0087090.1 MGP_NODShiLtJ_G0033010.1 mouse_genomes_project 7 157228853 157229976 - MGP_NODShiLtJ_P0087090 Ifitm2 protein_coding protein_coding MGP_NODShiLtJ_T0087052.1 MGP_NODShiLtJ_G0033003.1 mouse_genomes_project 7 157129133 157135907 + MGP_NODShiLtJ_P0087052 Ric8a protein_coding protein_coding MGP_NODShiLtJ_T0087053.1 MGP_NODShiLtJ_G0033003.1 mouse_genomes_project 7 157129491 157130519 + Ric8a protein_coding retained_intron MGP_NODShiLtJ_T0087054.1 MGP_NODShiLtJ_G0033003.1 mouse_genomes_project 7 157129598 157130735 + Ric8a protein_coding processed_transcript MGP_NODShiLtJ_T0087055.1 MGP_NODShiLtJ_G0033003.1 mouse_genomes_project 7 157129618 157130719 + Ric8a protein_coding processed_transcript MGP_NODShiLtJ_T0087056.1 MGP_NODShiLtJ_G0033003.1 mouse_genomes_project 7 157129875 157135136 + Ric8a protein_coding retained_intron MGP_NODShiLtJ_T0087057.1 MGP_NODShiLtJ_G0033003.1 mouse_genomes_project 7 157130338 157131911 + Ric8a protein_coding processed_transcript MGP_NODShiLtJ_T0087058.1 MGP_NODShiLtJ_G0033003.1 mouse_genomes_project 7 157132818 157135320 + Ric8a protein_coding retained_intron MGP_NODShiLtJ_T0087059.1 MGP_NODShiLtJ_G0033003.1 mouse_genomes_project 7 157133349 157134796 + Ric8a protein_coding retained_intron MGP_NODShiLtJ_T0085153.1 MGP_NODShiLtJ_G0032492.1 mouse_genomes_project 7 116360965 116362549 - MGP_NODShiLtJ_P0085153 Olfr66 protein_coding protein_coding MGP_NODShiLtJ_T0083295.1 MGP_NODShiLtJ_G0031996.1 mouse_genomes_project 7 47575878 47591576 + MGP_NODShiLtJ_P0083295 Il4i1 protein_coding protein_coding MGP_NODShiLtJ_T0083296.1 MGP_NODShiLtJ_G0031996.1 mouse_genomes_project 7 47576160 47601414 + MGP_NODShiLtJ_P0083296 Il4i1 protein_coding protein_coding MGP_NODShiLtJ_T0083297.1 MGP_NODShiLtJ_G0031996.1 mouse_genomes_project 7 47576177 47593717 + Il4i1 protein_coding processed_transcript MGP_NODShiLtJ_T0083298.1 MGP_NODShiLtJ_G0031996.1 mouse_genomes_project 7 47596896 47601419 + MGP_NODShiLtJ_P0083298 Il4i1 protein_coding protein_coding MGP_NODShiLtJ_T0083299.1 MGP_NODShiLtJ_G0031996.1 mouse_genomes_project 7 47596900 47598906 + Il4i1 protein_coding retained_intron MGP_NODShiLtJ_T0083300.1 MGP_NODShiLtJ_G0031996.1 mouse_genomes_project 7 47599300 47600391 + Il4i1 protein_coding retained_intron MGP_NODShiLtJ_T0083301.1 MGP_NODShiLtJ_G0031996.1 mouse_genomes_project 7 47599807 47600378 + MGP_NODShiLtJ_P0083301 Il4i1 protein_coding protein_coding MGP_NODShiLtJ_T0008807.1 MGP_NODShiLtJ_G0007107.1 mouse_genomes_project 7 72338739 72341907 + 1810008I18Rik lincRNA lincRNA MGP_NODShiLtJ_T0008808.1 MGP_NODShiLtJ_G0007107.1 mouse_genomes_project 7 72339659 72342070 + 1810008I18Rik lincRNA lincRNA MGP_NODShiLtJ_T0101384.1 MGP_NODShiLtJ_G0039598.1 mouse_genomes_project 7 13184507 13252378 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101385.1 MGP_NODShiLtJ_G0039598.1 mouse_genomes_project 7 13186446 13252428 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0015628.1 MGP_NODShiLtJ_G0013736.1 mouse_genomes_project 7 31374463 31374991 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008727.1 MGP_NODShiLtJ_G0007042.1 mouse_genomes_project 7 15506416 15507616 - Gm29442 lincRNA lincRNA MGP_NODShiLtJ_T0010817.1 MGP_NODShiLtJ_G0008950.1 mouse_genomes_project 7 142727229 142727320 + miRNA miRNA MGP_NODShiLtJ_T0081010.1 MGP_NODShiLtJ_G0031363.1 mouse_genomes_project 7 1730354 1732797 - MGP_NODShiLtJ_P0081010 Tmem86b protein_coding protein_coding MGP_NODShiLtJ_T0081011.1 MGP_NODShiLtJ_G0031363.1 mouse_genomes_project 7 1730356 1732502 - MGP_NODShiLtJ_P0081011 Tmem86b protein_coding protein_coding MGP_NODShiLtJ_T0081012.1 MGP_NODShiLtJ_G0031363.1 mouse_genomes_project 7 1730720 1734549 - MGP_NODShiLtJ_P0081012 Tmem86b protein_coding protein_coding MGP_NODShiLtJ_T0081013.1 MGP_NODShiLtJ_G0031363.1 mouse_genomes_project 7 1730918 1732651 - MGP_NODShiLtJ_P0081013 Tmem86b protein_coding protein_coding MGP_NODShiLtJ_T0086282.1 MGP_NODShiLtJ_G0032818.1 mouse_genomes_project 7 142119969 142140017 + MGP_NODShiLtJ_P0086282 Sez6l2 protein_coding protein_coding MGP_NODShiLtJ_T0086283.1 MGP_NODShiLtJ_G0032818.1 mouse_genomes_project 7 142119990 142127682 + MGP_NODShiLtJ_P0086283 Sez6l2 protein_coding protein_coding MGP_NODShiLtJ_T0086284.1 MGP_NODShiLtJ_G0032818.1 mouse_genomes_project 7 142120135 142140007 + MGP_NODShiLtJ_P0086284 Sez6l2 protein_coding protein_coding MGP_NODShiLtJ_T0086285.1 MGP_NODShiLtJ_G0032818.1 mouse_genomes_project 7 142120372 142139681 + MGP_NODShiLtJ_P0086285 Sez6l2 protein_coding protein_coding MGP_NODShiLtJ_T0086286.1 MGP_NODShiLtJ_G0032818.1 mouse_genomes_project 7 142123263 142128848 + MGP_NODShiLtJ_P0086286 Sez6l2 protein_coding protein_coding MGP_NODShiLtJ_T0086287.1 MGP_NODShiLtJ_G0032818.1 mouse_genomes_project 7 142137153 142139681 + Sez6l2 protein_coding retained_intron MGP_NODShiLtJ_T0086288.1 MGP_NODShiLtJ_G0032818.1 mouse_genomes_project 7 142137379 142140015 + MGP_NODShiLtJ_P0086288 Sez6l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100780.1 MGP_NODShiLtJ_G0039174.1 mouse_genomes_project 7 135800334 135800471 - Gm27991 snoRNA snoRNA MGP_NODShiLtJ_T0087192.1 MGP_NODShiLtJ_G0033034.1 mouse_genomes_project 7 157741148 157749349 - Pddc1 protein_coding retained_intron MGP_NODShiLtJ_T0087193.1 MGP_NODShiLtJ_G0033034.1 mouse_genomes_project 7 157741197 157742345 - Pddc1 protein_coding retained_intron MGP_NODShiLtJ_T0087194.1 MGP_NODShiLtJ_G0033034.1 mouse_genomes_project 7 157741197 157749395 - MGP_NODShiLtJ_P0087194 Pddc1 protein_coding protein_coding MGP_NODShiLtJ_T0087195.1 MGP_NODShiLtJ_G0033034.1 mouse_genomes_project 7 157741199 157749337 - Pddc1 protein_coding retained_intron MGP_NODShiLtJ_T0087196.1 MGP_NODShiLtJ_G0033034.1 mouse_genomes_project 7 157743857 157747079 - Pddc1 protein_coding retained_intron MGP_NODShiLtJ_T0087197.1 MGP_NODShiLtJ_G0033034.1 mouse_genomes_project 7 157744564 157749335 - Pddc1 protein_coding retained_intron MGP_NODShiLtJ_T0100731.1 MGP_NODShiLtJ_G0039125.1 mouse_genomes_project 7 36439358 36439484 + Gm24505 snoRNA snoRNA MGP_NODShiLtJ_T0015772.1 MGP_NODShiLtJ_G0013880.1 mouse_genomes_project 7 117465343 117466396 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081293.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11537213 11572343 + Lig1 protein_coding processed_transcript MGP_NODShiLtJ_T0081294.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11537243 11572343 + MGP_NODShiLtJ_P0081294 Lig1 protein_coding protein_coding MGP_NODShiLtJ_T0081295.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11538755 11572343 + MGP_NODShiLtJ_P0081295 Lig1 protein_coding protein_coding MGP_NODShiLtJ_T0081296.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11538764 11552610 + MGP_NODShiLtJ_P0081296 Lig1 protein_coding protein_coding MGP_NODShiLtJ_T0081297.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11538784 11553589 + MGP_NODShiLtJ_P0081297 Lig1 protein_coding protein_coding MGP_NODShiLtJ_T0081298.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11538794 11572344 + Lig1 protein_coding processed_transcript MGP_NODShiLtJ_T0081299.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11539194 11572351 + Lig1 protein_coding processed_transcript MGP_NODShiLtJ_T0081300.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11539194 11572343 + MGP_NODShiLtJ_P0081300 Lig1 protein_coding protein_coding MGP_NODShiLtJ_T0081301.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11540066 11572351 + Lig1 protein_coding processed_transcript MGP_NODShiLtJ_T0081302.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11540066 11552337 + MGP_NODShiLtJ_P0081302 Lig1 protein_coding protein_coding MGP_NODShiLtJ_T0081303.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11563906 11567098 + Lig1 protein_coding retained_intron MGP_NODShiLtJ_T0081304.1 MGP_NODShiLtJ_G0031478.1 mouse_genomes_project 7 11568273 11572283 + Lig1 protein_coding retained_intron MGP_NODShiLtJ_T0082235.1 MGP_NODShiLtJ_G0031755.1 mouse_genomes_project 7 28764904 28766952 + MGP_NODShiLtJ_P0082235 Rps16 protein_coding protein_coding MGP_NODShiLtJ_T0082236.1 MGP_NODShiLtJ_G0031755.1 mouse_genomes_project 7 28765015 28766952 + Rps16 protein_coding retained_intron MGP_NODShiLtJ_T0082237.1 MGP_NODShiLtJ_G0031755.1 mouse_genomes_project 7 28765176 28766952 + Rps16 protein_coding processed_transcript MGP_NODShiLtJ_T0086682.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145629399 145736410 - MGP_NODShiLtJ_P0086682 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086683.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145629399 145736410 - MGP_NODShiLtJ_P0086683 Fgfr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086684.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630495 145634772 - Fgfr2 protein_coding retained_intron MGP_NODShiLtJ_T0086685.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630596 145736428 - MGP_NODShiLtJ_P0086685 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086686.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630596 145736356 - MGP_NODShiLtJ_P0086686 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086687.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630695 145638802 - Fgfr2 protein_coding retained_intron MGP_NODShiLtJ_T0086688.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086688 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086689.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086689 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086690.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086690 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086691.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086691 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086692.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086692 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086693.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086693 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086694.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086694 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086695.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086695 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086696.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086696 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086697.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086697 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086698.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086698 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086699.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086699 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086700.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145630846 145732022 - MGP_NODShiLtJ_P0086700 Fgfr2 protein_coding protein_coding MGP_NODShiLtJ_T0086701.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145636629 145644962 - Fgfr2 protein_coding retained_intron MGP_NODShiLtJ_T0086702.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145644677 145651167 - Fgfr2 protein_coding retained_intron MGP_NODShiLtJ_T0086703.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145648831 145665047 - Fgfr2 protein_coding retained_intron MGP_NODShiLtJ_T0086704.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145653299 145664559 - Fgfr2 protein_coding retained_intron MGP_NODShiLtJ_T0086705.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145668961 145698217 - MGP_NODShiLtJ_P0086705 Fgfr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086706.1 MGP_NODShiLtJ_G0032897.1 mouse_genomes_project 7 145711172 145734140 - Fgfr2 protein_coding retained_intron MGP_NODShiLtJ_T0086355.1 MGP_NODShiLtJ_G0032833.1 mouse_genomes_project 7 142398313 142402926 + MGP_NODShiLtJ_P0086355 Mylpf protein_coding protein_coding MGP_NODShiLtJ_T0086356.1 MGP_NODShiLtJ_G0032833.1 mouse_genomes_project 7 142401164 142403691 + MGP_NODShiLtJ_P0086356 Mylpf protein_coding protein_coding MGP_NODShiLtJ_T0086357.1 MGP_NODShiLtJ_G0032833.1 mouse_genomes_project 7 142402082 142402891 + MGP_NODShiLtJ_P0086357 Mylpf protein_coding protein_coding MGP_NODShiLtJ_T0086358.1 MGP_NODShiLtJ_G0032833.1 mouse_genomes_project 7 142402517 142402859 + Mylpf protein_coding retained_intron MGP_NODShiLtJ_T0086359.1 MGP_NODShiLtJ_G0032833.1 mouse_genomes_project 7 142403299 142403691 + Mylpf protein_coding retained_intron MGP_NODShiLtJ_T0083368.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47923330 47936992 - Aldh16a1 protein_coding retained_intron MGP_NODShiLtJ_T0083369.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47923551 47937039 - MGP_NODShiLtJ_P0083369 Aldh16a1 protein_coding protein_coding MGP_NODShiLtJ_T0083370.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47924481 47927336 - MGP_NODShiLtJ_P0083370 Aldh16a1 protein_coding protein_coding MGP_NODShiLtJ_T0083371.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47925091 47937050 - MGP_NODShiLtJ_P0083371 Aldh16a1 protein_coding protein_coding MGP_NODShiLtJ_T0083372.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47925425 47927370 - Aldh16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0083373.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47927698 47928681 - Aldh16a1 protein_coding retained_intron MGP_NODShiLtJ_T0083374.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47930044 47936956 - Aldh16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0083375.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47930105 47936913 - Aldh16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0083376.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47930184 47930497 - Aldh16a1 protein_coding processed_transcript MGP_NODShiLtJ_T0083377.1 MGP_NODShiLtJ_G0032020.1 mouse_genomes_project 7 47930529 47931826 - Aldh16a1 protein_coding retained_intron MGP_NODShiLtJ_T0087094.1 MGP_NODShiLtJ_G0033012.1 mouse_genomes_project 7 157301134 157302319 - MGP_NODShiLtJ_P0087094 Ifitm3 protein_coding protein_coding MGP_NODShiLtJ_T0008836.1 MGP_NODShiLtJ_G0007129.1 mouse_genomes_project 7 80546823 80577402 - Gm30075 lincRNA lincRNA MGP_NODShiLtJ_T0005178.1 MGP_NODShiLtJ_G0004398.1 mouse_genomes_project 7 87856270 87857455 + Gm44706 antisense antisense MGP_NODShiLtJ_T0081165.1 MGP_NODShiLtJ_G0031421.1 mouse_genomes_project 7 3909612 3914201 - MGP_NODShiLtJ_P0081165 Olfr1348 protein_coding protein_coding MGP_NODShiLtJ_T0084028.1 MGP_NODShiLtJ_G0032179.1 mouse_genomes_project 7 74654926 74945938 + MGP_NODShiLtJ_P0084028 Igf1r protein_coding protein_coding MGP_NODShiLtJ_T0008764.1 MGP_NODShiLtJ_G0007076.1 mouse_genomes_project 7 38502964 38506331 - Gm28076 lincRNA lincRNA MGP_NODShiLtJ_T0084965.1 MGP_NODShiLtJ_G0032398.1 mouse_genomes_project 7 113901848 113908205 - MGP_NODShiLtJ_P0084965 Folr2 protein_coding protein_coding MGP_NODShiLtJ_T0005161.1 MGP_NODShiLtJ_G0004386.1 mouse_genomes_project 7 49480738 49497244 + Gm15700 antisense antisense MGP_NODShiLtJ_T0005243.1 MGP_NODShiLtJ_G0004443.1 mouse_genomes_project 7 144109999 144111128 + Gm44674 antisense antisense MGP_NODShiLtJ_T0083039.1 MGP_NODShiLtJ_G0031929.1 mouse_genomes_project 7 43595767 43624722 + MGP_NODShiLtJ_P0083039 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083040.1 MGP_NODShiLtJ_G0031929.1 mouse_genomes_project 7 43595777 43608988 + protein_coding processed_transcript MGP_NODShiLtJ_T0083041.1 MGP_NODShiLtJ_G0031929.1 mouse_genomes_project 7 43595832 43600010 + protein_coding processed_transcript MGP_NODShiLtJ_T0083042.1 MGP_NODShiLtJ_G0031929.1 mouse_genomes_project 7 43595871 43610270 + MGP_NODShiLtJ_P0083042 protein_coding protein_coding MGP_NODShiLtJ_T0083043.1 MGP_NODShiLtJ_G0031929.1 mouse_genomes_project 7 43609052 43610293 + protein_coding retained_intron MGP_NODShiLtJ_T0083044.1 MGP_NODShiLtJ_G0031929.1 mouse_genomes_project 7 43622919 43624375 + protein_coding retained_intron MGP_NODShiLtJ_T0085171.1 MGP_NODShiLtJ_G0032510.1 mouse_genomes_project 7 116734242 116743600 - MGP_NODShiLtJ_P0085171 Olfm5 protein_coding protein_coding MGP_NODShiLtJ_T0085172.1 MGP_NODShiLtJ_G0032510.1 mouse_genomes_project 7 116735301 116743581 - MGP_NODShiLtJ_P0085172 Olfm5 protein_coding protein_coding MGP_NODShiLtJ_T0015635.1 MGP_NODShiLtJ_G0013743.1 mouse_genomes_project 7 34241182 34242132 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100760.1 MGP_NODShiLtJ_G0039154.1 mouse_genomes_project 7 98458899 98459032 + Gm25345 snoRNA snoRNA MGP_NODShiLtJ_T0086531.1 MGP_NODShiLtJ_G0032868.1 mouse_genomes_project 7 143157729 143162869 - MGP_NODShiLtJ_P0086531 Prss53 protein_coding protein_coding MGP_NODShiLtJ_T0086532.1 MGP_NODShiLtJ_G0032868.1 mouse_genomes_project 7 143157981 143162866 - MGP_NODShiLtJ_P0086532 Prss53 protein_coding protein_coding MGP_NODShiLtJ_T0002223.1 MGP_NODShiLtJ_G0002134.1 mouse_genomes_project 7 86820477 86821554 - TEC TEC MGP_NODShiLtJ_T0086299.1 MGP_NODShiLtJ_G0032822.1 mouse_genomes_project 7 142187343 142189663 - MGP_NODShiLtJ_P0086299 protein_coding protein_coding MGP_NODShiLtJ_T0086302.1 MGP_NODShiLtJ_G0032822.1 mouse_genomes_project 7 142187485 142189631 - MGP_NODShiLtJ_P0086302 protein_coding protein_coding MGP_NODShiLtJ_T0086303.1 MGP_NODShiLtJ_G0032822.1 mouse_genomes_project 7 142187687 142188991 - MGP_NODShiLtJ_P0086303 protein_coding protein_coding MGP_NODShiLtJ_T0086304.1 MGP_NODShiLtJ_G0032822.1 mouse_genomes_project 7 142187716 142189628 - MGP_NODShiLtJ_P0086304 protein_coding protein_coding MGP_NODShiLtJ_T0085135.1 MGP_NODShiLtJ_G0032476.1 mouse_genomes_project 7 115894288 115895245 + MGP_NODShiLtJ_P0085135 Olfr617 protein_coding protein_coding MGP_NODShiLtJ_T0086587.1 MGP_NODShiLtJ_G0032880.1 mouse_genomes_project 7 143442128 143465445 + MGP_NODShiLtJ_P0086587 protein_coding protein_coding MGP_NODShiLtJ_T0086588.1 MGP_NODShiLtJ_G0032880.1 mouse_genomes_project 7 143442132 143446644 + MGP_NODShiLtJ_P0086588 protein_coding protein_coding MGP_NODShiLtJ_T0086589.1 MGP_NODShiLtJ_G0032880.1 mouse_genomes_project 7 143442916 143465452 + MGP_NODShiLtJ_P0086589 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0086590.1 MGP_NODShiLtJ_G0032880.1 mouse_genomes_project 7 143447348 143448055 + protein_coding retained_intron MGP_NODShiLtJ_T0086591.1 MGP_NODShiLtJ_G0032880.1 mouse_genomes_project 7 143462251 143462992 + protein_coding retained_intron MGP_NODShiLtJ_T0081987.1 MGP_NODShiLtJ_G0031688.1 mouse_genomes_project 7 25599235 25605244 - MGP_NODShiLtJ_P0081987 Tmem91 protein_coding protein_coding MGP_NODShiLtJ_T0081988.1 MGP_NODShiLtJ_G0031688.1 mouse_genomes_project 7 25599238 25603553 - MGP_NODShiLtJ_P0081988 Tmem91 protein_coding protein_coding MGP_NODShiLtJ_T0081989.1 MGP_NODShiLtJ_G0031688.1 mouse_genomes_project 7 25599338 25605168 - MGP_NODShiLtJ_P0081989 Tmem91 protein_coding protein_coding MGP_NODShiLtJ_T0081990.1 MGP_NODShiLtJ_G0031688.1 mouse_genomes_project 7 25599338 25605125 - MGP_NODShiLtJ_P0081990 Tmem91 protein_coding protein_coding MGP_NODShiLtJ_T0081991.1 MGP_NODShiLtJ_G0031688.1 mouse_genomes_project 7 25600142 25605197 - Tmem91 protein_coding retained_intron MGP_NODShiLtJ_T0081992.1 MGP_NODShiLtJ_G0031688.1 mouse_genomes_project 7 25601276 25605196 - Tmem91 protein_coding retained_intron MGP_NODShiLtJ_T0008823.1 MGP_NODShiLtJ_G0007117.1 mouse_genomes_project 7 78485696 78526329 + Gm29295 lincRNA lincRNA MGP_NODShiLtJ_T0082460.1 MGP_NODShiLtJ_G0031809.1 mouse_genomes_project 7 30587756 30628380 + MGP_NODShiLtJ_P0082460 Zfp568 protein_coding protein_coding MGP_NODShiLtJ_T0082461.1 MGP_NODShiLtJ_G0031809.1 mouse_genomes_project 7 30589105 30631551 + MGP_NODShiLtJ_P0082461 Zfp568 protein_coding protein_coding MGP_NODShiLtJ_T0082462.1 MGP_NODShiLtJ_G0031809.1 mouse_genomes_project 7 30591577 30626916 + MGP_NODShiLtJ_P0082462 Zfp568 protein_coding protein_coding MGP_NODShiLtJ_T0082463.1 MGP_NODShiLtJ_G0031809.1 mouse_genomes_project 7 30591577 30626916 + MGP_NODShiLtJ_P0082463 Zfp568 protein_coding protein_coding MGP_NODShiLtJ_T0086983.1 MGP_NODShiLtJ_G0032968.1 mouse_genomes_project 7 156217618 156230378 - MGP_NODShiLtJ_P0086983 Caly protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082861.1 MGP_NODShiLtJ_G0031893.1 mouse_genomes_project 7 35379027 35379483 + MGP_NODShiLtJ_P0082861 Gm6096 protein_coding protein_coding MGP_NODShiLtJ_T0085242.1 MGP_NODShiLtJ_G0032557.1 mouse_genomes_project 7 118322538 118325733 + MGP_NODShiLtJ_P0085242 Gm5901 protein_coding protein_coding MGP_NODShiLtJ_T0081497.1 MGP_NODShiLtJ_G0031543.1 mouse_genomes_project 7 17198920 17204805 + MGP_NODShiLtJ_P0081497 Ceacam12 protein_coding protein_coding MGP_NODShiLtJ_T0081498.1 MGP_NODShiLtJ_G0031543.1 mouse_genomes_project 7 17198930 17210978 + MGP_NODShiLtJ_P0081498 Ceacam12 protein_coding protein_coding MGP_NODShiLtJ_T0081499.1 MGP_NODShiLtJ_G0031543.1 mouse_genomes_project 7 17198982 17203419 + MGP_NODShiLtJ_P0081499 Ceacam12 protein_coding protein_coding MGP_NODShiLtJ_T0018252.1 MGP_NODShiLtJ_G0015555.1 mouse_genomes_project 7 141925592 141934253 - Gm9967 processed_transcript antisense MGP_NODShiLtJ_T0018253.1 MGP_NODShiLtJ_G0015555.1 mouse_genomes_project 7 141931168 141934241 - Gm9967 processed_transcript antisense MGP_NODShiLtJ_T0018254.1 MGP_NODShiLtJ_G0015555.1 mouse_genomes_project 7 141932439 141934293 - Gm9967 processed_transcript retained_intron MGP_NODShiLtJ_T0087472.1 MGP_NODShiLtJ_G0033084.1 mouse_genomes_project 7 160167035 160183050 - MGP_NODShiLtJ_P0087472 protein_coding protein_coding MGP_NODShiLtJ_T0002207.1 MGP_NODShiLtJ_G0002119.1 mouse_genomes_project 7 80871851 80873254 - TEC TEC MGP_NODShiLtJ_T0008968.1 MGP_NODShiLtJ_G0007211.1 mouse_genomes_project 7 148587972 148633794 - 1500002F19Rik lincRNA lincRNA MGP_NODShiLtJ_T0005106.1 MGP_NODShiLtJ_G0004345.1 mouse_genomes_project 7 19246594 19248859 + Gm16175 antisense antisense MGP_NODShiLtJ_T0086132.1 MGP_NODShiLtJ_G0032796.1 mouse_genomes_project 7 141722151 141728107 - MGP_NODShiLtJ_P0086132 Il27 protein_coding protein_coding MGP_NODShiLtJ_T0082438.1 MGP_NODShiLtJ_G0031803.1 mouse_genomes_project 7 30430495 30450246 - MGP_NODShiLtJ_P0082438 protein_coding protein_coding MGP_NODShiLtJ_T0082439.1 MGP_NODShiLtJ_G0031803.1 mouse_genomes_project 7 30436650 30450266 - MGP_NODShiLtJ_P0082439 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082440.1 MGP_NODShiLtJ_G0031803.1 mouse_genomes_project 7 30439710 30450218 - protein_coding retained_intron MGP_NODShiLtJ_T0082441.1 MGP_NODShiLtJ_G0031803.1 mouse_genomes_project 7 30447482 30450019 - protein_coding processed_transcript MGP_NODShiLtJ_T0085182.1 MGP_NODShiLtJ_G0032514.1 mouse_genomes_project 7 116834489 116948643 - protein_coding processed_transcript MGP_NODShiLtJ_T0085183.1 MGP_NODShiLtJ_G0032514.1 mouse_genomes_project 7 116834492 116960135 - MGP_NODShiLtJ_P0085183 protein_coding protein_coding MGP_NODShiLtJ_T0085184.1 MGP_NODShiLtJ_G0032514.1 mouse_genomes_project 7 116834492 116960136 - MGP_NODShiLtJ_P0085184 protein_coding protein_coding MGP_NODShiLtJ_T0085187.1 MGP_NODShiLtJ_G0032514.1 mouse_genomes_project 7 116951006 116960143 - MGP_NODShiLtJ_P0085187 protein_coding protein_coding MGP_NODShiLtJ_T0085189.1 MGP_NODShiLtJ_G0032514.1 mouse_genomes_project 7 116954802 116960023 - protein_coding processed_transcript MGP_NODShiLtJ_T0085190.1 MGP_NODShiLtJ_G0032514.1 mouse_genomes_project 7 116955684 116960146 - protein_coding retained_intron MGP_NODShiLtJ_T0015800.1 MGP_NODShiLtJ_G0013908.1 mouse_genomes_project 7 142482538 142483326 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015767.1 MGP_NODShiLtJ_G0013875.1 mouse_genomes_project 7 115355176 115355490 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082875.1 MGP_NODShiLtJ_G0031895.1 mouse_genomes_project 7 35809805 35829063 - MGP_NODShiLtJ_P0082875 Kctd15 protein_coding protein_coding MGP_NODShiLtJ_T0082876.1 MGP_NODShiLtJ_G0031895.1 mouse_genomes_project 7 35809806 35827463 - MGP_NODShiLtJ_P0082876 Kctd15 protein_coding protein_coding MGP_NODShiLtJ_T0082877.1 MGP_NODShiLtJ_G0031895.1 mouse_genomes_project 7 35809810 35831402 - MGP_NODShiLtJ_P0082877 Kctd15 protein_coding protein_coding MGP_NODShiLtJ_T0082878.1 MGP_NODShiLtJ_G0031895.1 mouse_genomes_project 7 35810960 35821953 - Kctd15 protein_coding processed_transcript MGP_NODShiLtJ_T0082879.1 MGP_NODShiLtJ_G0031895.1 mouse_genomes_project 7 35823195 35829054 - MGP_NODShiLtJ_P0082879 Kctd15 protein_coding protein_coding MGP_NODShiLtJ_T0082880.1 MGP_NODShiLtJ_G0031895.1 mouse_genomes_project 7 35827257 35827652 - Kctd15 protein_coding processed_transcript MGP_NODShiLtJ_T0082881.1 MGP_NODShiLtJ_G0031895.1 mouse_genomes_project 7 35827257 35827938 - Kctd15 protein_coding processed_transcript MGP_NODShiLtJ_T0082882.1 MGP_NODShiLtJ_G0031895.1 mouse_genomes_project 7 35831262 35832625 - Kctd15 protein_coding processed_transcript MGP_NODShiLtJ_T0010738.1 MGP_NODShiLtJ_G0008871.1 mouse_genomes_project 7 24057592 24057717 - Gm27592 miRNA miRNA MGP_NODShiLtJ_T0086397.1 MGP_NODShiLtJ_G0032846.1 mouse_genomes_project 7 142673379 142682404 - MGP_NODShiLtJ_P0086397 Zfp689 protein_coding protein_coding MGP_NODShiLtJ_T0086398.1 MGP_NODShiLtJ_G0032846.1 mouse_genomes_project 7 142675126 142682239 - MGP_NODShiLtJ_P0086398 Zfp689 protein_coding protein_coding MGP_NODShiLtJ_T0084244.1 MGP_NODShiLtJ_G0032222.1 mouse_genomes_project 7 88424912 88435964 + MGP_NODShiLtJ_P0084244 Gdpgp1 protein_coding protein_coding MGP_NODShiLtJ_T0102183.1 MGP_NODShiLtJ_G0040349.1 mouse_genomes_project 7 95442755 95443695 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084391.1 MGP_NODShiLtJ_G0032244.1 mouse_genomes_project 7 89635418 89637218 - Rps17 protein_coding processed_transcript MGP_NODShiLtJ_T0084392.1 MGP_NODShiLtJ_G0032244.1 mouse_genomes_project 7 89635419 89637941 - MGP_NODShiLtJ_P0084392 Rps17 protein_coding protein_coding MGP_NODShiLtJ_T0084393.1 MGP_NODShiLtJ_G0032244.1 mouse_genomes_project 7 89635426 89637921 - Rps17 protein_coding retained_intron MGP_NODShiLtJ_T0084394.1 MGP_NODShiLtJ_G0032244.1 mouse_genomes_project 7 89636103 89637919 - Rps17 protein_coding retained_intron MGP_NODShiLtJ_T0084395.1 MGP_NODShiLtJ_G0032244.1 mouse_genomes_project 7 89637390 89637911 - Rps17 protein_coding processed_transcript MGP_NODShiLtJ_T0083062.1 MGP_NODShiLtJ_G0031938.1 mouse_genomes_project 7 45870914 45888477 - MGP_NODShiLtJ_P0083062 Zfp715 protein_coding protein_coding MGP_NODShiLtJ_T0083063.1 MGP_NODShiLtJ_G0031938.1 mouse_genomes_project 7 45871240 45888485 - MGP_NODShiLtJ_P0083063 Zfp715 protein_coding protein_coding MGP_NODShiLtJ_T0083064.1 MGP_NODShiLtJ_G0031938.1 mouse_genomes_project 7 45871240 45886716 - MGP_NODShiLtJ_P0083064 Zfp715 protein_coding protein_coding MGP_NODShiLtJ_T0083065.1 MGP_NODShiLtJ_G0031938.1 mouse_genomes_project 7 45871240 45888493 - MGP_NODShiLtJ_P0083065 Zfp715 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083066.1 MGP_NODShiLtJ_G0031938.1 mouse_genomes_project 7 45875197 45888325 - MGP_NODShiLtJ_P0083066 Zfp715 protein_coding protein_coding MGP_NODShiLtJ_T0083067.1 MGP_NODShiLtJ_G0031938.1 mouse_genomes_project 7 45876721 45888524 - Zfp715 protein_coding retained_intron MGP_NODShiLtJ_T0083068.1 MGP_NODShiLtJ_G0031938.1 mouse_genomes_project 7 45876855 45888293 - MGP_NODShiLtJ_P0083068 Zfp715 protein_coding protein_coding MGP_NODShiLtJ_T0015597.1 MGP_NODShiLtJ_G0013705.1 mouse_genomes_project 7 16899917 16900409 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084221.1 MGP_NODShiLtJ_G0032217.1 mouse_genomes_project 7 88054946 88066149 - MGP_NODShiLtJ_P0084221 Arpin protein_coding protein_coding MGP_NODShiLtJ_T0081495.1 MGP_NODShiLtJ_G0031542.1 mouse_genomes_project 7 17134893 17144287 + MGP_NODShiLtJ_P0081495 Ceacam13 protein_coding protein_coding MGP_NODShiLtJ_T0081496.1 MGP_NODShiLtJ_G0031542.1 mouse_genomes_project 7 17134893 17138492 + MGP_NODShiLtJ_P0081496 Ceacam13 protein_coding protein_coding MGP_NODShiLtJ_T0002176.1 MGP_NODShiLtJ_G0002088.1 mouse_genomes_project 7 46050927 46051404 + TEC TEC MGP_NODShiLtJ_T0086712.1 MGP_NODShiLtJ_G0032899.1 mouse_genomes_project 7 146013174 146031012 - MGP_NODShiLtJ_P0086712 Nsmce4a protein_coding protein_coding MGP_NODShiLtJ_T0086713.1 MGP_NODShiLtJ_G0032899.1 mouse_genomes_project 7 146013184 146017737 - Nsmce4a protein_coding retained_intron MGP_NODShiLtJ_T0086714.1 MGP_NODShiLtJ_G0032899.1 mouse_genomes_project 7 146014438 146058860 - MGP_NODShiLtJ_P0086714 Nsmce4a protein_coding protein_coding MGP_NODShiLtJ_T0086715.1 MGP_NODShiLtJ_G0032899.1 mouse_genomes_project 7 146017312 146021271 - Nsmce4a protein_coding retained_intron MGP_NODShiLtJ_T0086716.1 MGP_NODShiLtJ_G0032899.1 mouse_genomes_project 7 146018746 146029585 - MGP_NODShiLtJ_P0086716 Nsmce4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086717.1 MGP_NODShiLtJ_G0032899.1 mouse_genomes_project 7 146021471 146024563 - Nsmce4a protein_coding retained_intron MGP_NODShiLtJ_T0085424.1 MGP_NODShiLtJ_G0032643.1 mouse_genomes_project 7 122514914 122522188 - MGP_NODShiLtJ_P0085424 Nlrp10 protein_coding protein_coding MGP_NODShiLtJ_T0084778.1 MGP_NODShiLtJ_G0032357.1 mouse_genomes_project 7 111183628 111263093 + MGP_NODShiLtJ_P0084778 Gdpd5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084779.1 MGP_NODShiLtJ_G0032357.1 mouse_genomes_project 7 111183659 111263964 + MGP_NODShiLtJ_P0084779 Gdpd5 protein_coding protein_coding MGP_NODShiLtJ_T0002262.1 MGP_NODShiLtJ_G0002173.1 mouse_genomes_project 7 142690025 142691427 + TEC TEC MGP_NODShiLtJ_T0084759.1 MGP_NODShiLtJ_G0032350.1 mouse_genomes_project 7 110472633 110488006 + MGP_NODShiLtJ_P0084759 Prkrir protein_coding protein_coding MGP_NODShiLtJ_T0084760.1 MGP_NODShiLtJ_G0032350.1 mouse_genomes_project 7 110472633 110485311 + MGP_NODShiLtJ_P0084760 Prkrir protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084761.1 MGP_NODShiLtJ_G0032350.1 mouse_genomes_project 7 110472858 110485057 + MGP_NODShiLtJ_P0084761 Prkrir protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084762.1 MGP_NODShiLtJ_G0032350.1 mouse_genomes_project 7 110479820 110485201 + Prkrir protein_coding processed_transcript MGP_NODShiLtJ_T0005576.1 MGP_NODShiLtJ_G0004691.1 mouse_genomes_project 7 87367569 87368693 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0005577.1 MGP_NODShiLtJ_G0004691.1 mouse_genomes_project 7 87367573 87368917 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0015808.1 MGP_NODShiLtJ_G0013916.1 mouse_genomes_project 7 144071469 144071919 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085912.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136932197 136957654 - MGP_NODShiLtJ_P0085912 Palb2 protein_coding protein_coding MGP_NODShiLtJ_T0085913.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136932197 136957756 - MGP_NODShiLtJ_P0085913 Palb2 protein_coding protein_coding MGP_NODShiLtJ_T0085914.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136932197 136957719 - MGP_NODShiLtJ_P0085914 Palb2 protein_coding protein_coding MGP_NODShiLtJ_T0085915.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136932200 136936976 - Palb2 protein_coding retained_intron MGP_NODShiLtJ_T0085916.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136932202 136948503 - MGP_NODShiLtJ_P0085916 Palb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085917.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136936507 136957698 - MGP_NODShiLtJ_P0085917 Palb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085918.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136936507 136957727 - MGP_NODShiLtJ_P0085918 Palb2 protein_coding protein_coding MGP_NODShiLtJ_T0085919.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136949639 136957729 - Palb2 protein_coding retained_intron MGP_NODShiLtJ_T0085920.1 MGP_NODShiLtJ_G0032759.1 mouse_genomes_project 7 136954898 136957795 - Palb2 protein_coding retained_intron MGP_NODShiLtJ_T0101193.1 MGP_NODShiLtJ_G0039503.1 mouse_genomes_project 7 75371386 75372940 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101194.1 MGP_NODShiLtJ_G0039503.1 mouse_genomes_project 7 75371768 75372488 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0008751.1 MGP_NODShiLtJ_G0007064.1 mouse_genomes_project 7 35587637 35688517 + Gm12766 lincRNA lincRNA MGP_NODShiLtJ_T0015663.1 MGP_NODShiLtJ_G0013771.1 mouse_genomes_project 7 43223910 43231564 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081950.1 MGP_NODShiLtJ_G0031679.1 mouse_genomes_project 7 25259937 25275948 - MGP_NODShiLtJ_P0081950 Lipe protein_coding protein_coding MGP_NODShiLtJ_T0081951.1 MGP_NODShiLtJ_G0031679.1 mouse_genomes_project 7 25259949 25279034 - MGP_NODShiLtJ_P0081951 Lipe protein_coding protein_coding MGP_NODShiLtJ_T0081952.1 MGP_NODShiLtJ_G0031679.1 mouse_genomes_project 7 25263450 25265224 - MGP_NODShiLtJ_P0081952 Lipe protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081953.1 MGP_NODShiLtJ_G0031679.1 mouse_genomes_project 7 25263471 25264106 - Lipe protein_coding retained_intron MGP_NODShiLtJ_T0081954.1 MGP_NODShiLtJ_G0031679.1 mouse_genomes_project 7 25268900 25270817 - MGP_NODShiLtJ_P0081954 Lipe protein_coding protein_coding MGP_NODShiLtJ_T0081955.1 MGP_NODShiLtJ_G0031679.1 mouse_genomes_project 7 25277782 25279033 - MGP_NODShiLtJ_P0081955 Lipe protein_coding protein_coding MGP_NODShiLtJ_T0081708.1 MGP_NODShiLtJ_G0031605.1 mouse_genomes_project 7 19245447 19248108 - MGP_NODShiLtJ_P0081708 Bcl3 protein_coding protein_coding MGP_NODShiLtJ_T0081709.1 MGP_NODShiLtJ_G0031605.1 mouse_genomes_project 7 19245447 19260914 - MGP_NODShiLtJ_P0081709 Bcl3 protein_coding protein_coding MGP_NODShiLtJ_T0081710.1 MGP_NODShiLtJ_G0031605.1 mouse_genomes_project 7 19248103 19248876 - Bcl3 protein_coding retained_intron MGP_NODShiLtJ_T0081711.1 MGP_NODShiLtJ_G0031605.1 mouse_genomes_project 7 19248335 19249820 - Bcl3 protein_coding retained_intron MGP_NODShiLtJ_T0081712.1 MGP_NODShiLtJ_G0031605.1 mouse_genomes_project 7 19248481 19253212 - Bcl3 protein_coding processed_transcript MGP_NODShiLtJ_T0081713.1 MGP_NODShiLtJ_G0031605.1 mouse_genomes_project 7 19248572 19260301 - MGP_NODShiLtJ_P0081713 Bcl3 protein_coding protein_coding MGP_NODShiLtJ_T0081714.1 MGP_NODShiLtJ_G0031605.1 mouse_genomes_project 7 19249381 19260914 - Bcl3 protein_coding processed_transcript MGP_NODShiLtJ_T0010834.1 MGP_NODShiLtJ_G0008967.1 mouse_genomes_project 7 160354292 160354358 + Gm22064 miRNA miRNA MGP_NODShiLtJ_T0015550.1 MGP_NODShiLtJ_G0013658.1 mouse_genomes_project 7 208817 209697 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081757.1 MGP_NODShiLtJ_G0031632.1 mouse_genomes_project 7 23894929 23912382 - MGP_NODShiLtJ_P0081757 Zfp111 protein_coding protein_coding MGP_NODShiLtJ_T0081758.1 MGP_NODShiLtJ_G0031632.1 mouse_genomes_project 7 23897967 23905441 - MGP_NODShiLtJ_P0081758 Zfp111 protein_coding protein_coding MGP_NODShiLtJ_T0081759.1 MGP_NODShiLtJ_G0031632.1 mouse_genomes_project 7 23899175 23916283 - MGP_NODShiLtJ_P0081759 Zfp111 protein_coding protein_coding MGP_NODShiLtJ_T0081760.1 MGP_NODShiLtJ_G0031632.1 mouse_genomes_project 7 23901473 23912304 - Zfp111 protein_coding processed_transcript MGP_NODShiLtJ_T0081761.1 MGP_NODShiLtJ_G0031632.1 mouse_genomes_project 7 23907308 23912360 - Zfp111 protein_coding retained_intron MGP_NODShiLtJ_T0085373.1 MGP_NODShiLtJ_G0032600.1 mouse_genomes_project 7 120465349 120466453 + MGP_NODShiLtJ_P0085373 Olfr716 protein_coding protein_coding MGP_NODShiLtJ_T0082497.1 MGP_NODShiLtJ_G0031820.1 mouse_genomes_project 7 30862330 30871801 - MGP_NODShiLtJ_P0082497 Tbcb protein_coding protein_coding MGP_NODShiLtJ_T0082498.1 MGP_NODShiLtJ_G0031820.1 mouse_genomes_project 7 30862332 30865200 - Tbcb protein_coding processed_transcript MGP_NODShiLtJ_T0082499.1 MGP_NODShiLtJ_G0031820.1 mouse_genomes_project 7 30862336 30865261 - Tbcb protein_coding retained_intron MGP_NODShiLtJ_T0010821.1 MGP_NODShiLtJ_G0008954.1 mouse_genomes_project 7 146423604 146423672 + Mir7061 miRNA miRNA MGP_NODShiLtJ_T0010761.1 MGP_NODShiLtJ_G0008894.1 mouse_genomes_project 7 47783522 47783584 - Mir7054 miRNA miRNA MGP_NODShiLtJ_T0102072.1 MGP_NODShiLtJ_G0040239.1 mouse_genomes_project 7 10073145 10074401 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081735.1 MGP_NODShiLtJ_G0031621.1 mouse_genomes_project 7 23325209 23325895 + MGP_NODShiLtJ_P0081735 Vmn1r173 protein_coding protein_coding MGP_NODShiLtJ_T0084063.1 MGP_NODShiLtJ_G0032188.1 mouse_genomes_project 7 81345476 81421753 - MGP_NODShiLtJ_P0084063 St8sia2 protein_coding protein_coding MGP_NODShiLtJ_T0084064.1 MGP_NODShiLtJ_G0032188.1 mouse_genomes_project 7 81368813 81421769 - MGP_NODShiLtJ_P0084064 St8sia2 protein_coding protein_coding MGP_NODShiLtJ_T0102197.1 MGP_NODShiLtJ_G0040363.1 mouse_genomes_project 7 115962785 115966403 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085203.1 MGP_NODShiLtJ_G0032521.1 mouse_genomes_project 7 117172956 117173898 + MGP_NODShiLtJ_P0085203 Olfr651 protein_coding protein_coding MGP_NODShiLtJ_T0084519.1 MGP_NODShiLtJ_G0032292.1 mouse_genomes_project 7 96223756 96224767 + MGP_NODShiLtJ_P0084519 Olfr293 protein_coding protein_coding MGP_NODShiLtJ_T0082139.1 MGP_NODShiLtJ_G0031729.1 mouse_genomes_project 7 27812867 27820776 + MGP_NODShiLtJ_P0082139 Hipk4 protein_coding protein_coding MGP_NODShiLtJ_T0082140.1 MGP_NODShiLtJ_G0031729.1 mouse_genomes_project 7 27816659 27820771 + MGP_NODShiLtJ_P0082140 Hipk4 protein_coding protein_coding MGP_NODShiLtJ_T0084890.1 MGP_NODShiLtJ_G0032385.1 mouse_genomes_project 7 112788913 112807072 - MGP_NODShiLtJ_P0084890 Relt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084891.1 MGP_NODShiLtJ_G0032385.1 mouse_genomes_project 7 112790944 112806893 - MGP_NODShiLtJ_P0084891 Relt protein_coding protein_coding MGP_NODShiLtJ_T0084892.1 MGP_NODShiLtJ_G0032385.1 mouse_genomes_project 7 112794827 112799132 - MGP_NODShiLtJ_P0084892 Relt protein_coding protein_coding MGP_NODShiLtJ_T0084893.1 MGP_NODShiLtJ_G0032385.1 mouse_genomes_project 7 112794827 112800005 - MGP_NODShiLtJ_P0084893 Relt protein_coding protein_coding MGP_NODShiLtJ_T0084894.1 MGP_NODShiLtJ_G0032385.1 mouse_genomes_project 7 112794837 112806824 - MGP_NODShiLtJ_P0084894 Relt protein_coding protein_coding MGP_NODShiLtJ_T0084895.1 MGP_NODShiLtJ_G0032385.1 mouse_genomes_project 7 112796759 112807064 - MGP_NODShiLtJ_P0084895 Relt protein_coding protein_coding MGP_NODShiLtJ_T0081659.1 MGP_NODShiLtJ_G0031593.1 mouse_genomes_project 7 18982264 18985632 + MGP_NODShiLtJ_P0081659 Zfp296 protein_coding protein_coding MGP_NODShiLtJ_T0102102.1 MGP_NODShiLtJ_G0040269.1 mouse_genomes_project 7 16716401 16722829 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102060.1 MGP_NODShiLtJ_G0040227.1 mouse_genomes_project 7 8204844 8208791 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085573.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126581748 126834691 + MGP_NODShiLtJ_P0085573 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085574.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126581785 126827893 + MGP_NODShiLtJ_P0085574 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085575.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126581938 126756626 + Tead1 protein_coding retained_intron MGP_NODShiLtJ_T0085576.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126650506 126824669 + MGP_NODShiLtJ_P0085576 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085577.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126663949 126824669 + MGP_NODShiLtJ_P0085577 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085578.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126667198 126824669 + MGP_NODShiLtJ_P0085578 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085579.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126670180 126721541 + Tead1 protein_coding processed_transcript MGP_NODShiLtJ_T0085580.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126670231 126824669 + MGP_NODShiLtJ_P0085580 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085581.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126670276 126824669 + MGP_NODShiLtJ_P0085581 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085582.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126670276 126824669 + MGP_NODShiLtJ_P0085582 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085583.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126670276 126824669 + MGP_NODShiLtJ_P0085583 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085584.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126670329 126785108 + MGP_NODShiLtJ_P0085584 Tead1 protein_coding protein_coding MGP_NODShiLtJ_T0085585.1 MGP_NODShiLtJ_G0032679.1 mouse_genomes_project 7 126670339 126756605 + Tead1 protein_coding retained_intron MGP_NODShiLtJ_T0081776.1 MGP_NODShiLtJ_G0031637.1 mouse_genomes_project 7 24021438 24037341 - MGP_NODShiLtJ_P0081776 Zfp94 protein_coding protein_coding MGP_NODShiLtJ_T0081777.1 MGP_NODShiLtJ_G0031637.1 mouse_genomes_project 7 24021531 24037402 - MGP_NODShiLtJ_P0081777 Zfp94 protein_coding protein_coding MGP_NODShiLtJ_T0081778.1 MGP_NODShiLtJ_G0031637.1 mouse_genomes_project 7 24023361 24030139 - Zfp94 protein_coding retained_intron MGP_NODShiLtJ_T0081779.1 MGP_NODShiLtJ_G0031637.1 mouse_genomes_project 7 24029318 24037360 - Zfp94 protein_coding processed_transcript MGP_NODShiLtJ_T0081780.1 MGP_NODShiLtJ_G0031637.1 mouse_genomes_project 7 24029611 24037344 - Zfp94 protein_coding retained_intron MGP_NODShiLtJ_T0081781.1 MGP_NODShiLtJ_G0031637.1 mouse_genomes_project 7 24029726 24037318 - Zfp94 protein_coding processed_transcript MGP_NODShiLtJ_T0087017.1 MGP_NODShiLtJ_G0032977.1 mouse_genomes_project 7 156369033 156370091 - MGP_NODShiLtJ_P0087017 Olfr524 protein_coding protein_coding MGP_NODShiLtJ_T0015696.1 MGP_NODShiLtJ_G0013804.1 mouse_genomes_project 7 60061309 60063115 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081350.1 MGP_NODShiLtJ_G0031502.1 mouse_genomes_project 7 14770169 14791716 - MGP_NODShiLtJ_P0081350 Ehd2 protein_coding protein_coding MGP_NODShiLtJ_T0081351.1 MGP_NODShiLtJ_G0031502.1 mouse_genomes_project 7 14780878 14791624 - MGP_NODShiLtJ_P0081351 Ehd2 protein_coding protein_coding MGP_NODShiLtJ_T0008730.1 MGP_NODShiLtJ_G0007044.1 mouse_genomes_project 7 18289596 18294129 - Gm26821 lincRNA lincRNA MGP_NODShiLtJ_T0015655.1 MGP_NODShiLtJ_G0013763.1 mouse_genomes_project 7 41339578 41340042 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018257.1 MGP_NODShiLtJ_G0015558.1 mouse_genomes_project 7 142681881 142691742 + B130055M24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0082585.1 MGP_NODShiLtJ_G0031840.1 mouse_genomes_project 7 31210157 31213410 + Hspb6 protein_coding processed_transcript MGP_NODShiLtJ_T0082586.1 MGP_NODShiLtJ_G0031840.1 mouse_genomes_project 7 31210503 31213409 + Hspb6 protein_coding processed_transcript MGP_NODShiLtJ_T0082587.1 MGP_NODShiLtJ_G0031840.1 mouse_genomes_project 7 31211247 31213413 + MGP_NODShiLtJ_P0082587 Hspb6 protein_coding protein_coding MGP_NODShiLtJ_T0082588.1 MGP_NODShiLtJ_G0031840.1 mouse_genomes_project 7 31211854 31212614 + Hspb6 protein_coding processed_transcript MGP_NODShiLtJ_T0005199.1 MGP_NODShiLtJ_G0004412.1 mouse_genomes_project 7 108410081 108420198 - Gm15413 antisense antisense MGP_NODShiLtJ_T0008740.1 MGP_NODShiLtJ_G0007053.1 mouse_genomes_project 7 25495430 25512938 + lincRNA lincRNA MGP_NODShiLtJ_T0081975.1 MGP_NODShiLtJ_G0031685.1 mouse_genomes_project 7 25549051 25550825 + MGP_NODShiLtJ_P0081975 B3gnt8 protein_coding protein_coding MGP_NODShiLtJ_T0081976.1 MGP_NODShiLtJ_G0031685.1 mouse_genomes_project 7 25550037 25558904 + MGP_NODShiLtJ_P0081976 B3gnt8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081977.1 MGP_NODShiLtJ_G0031685.1 mouse_genomes_project 7 25550038 25551892 + MGP_NODShiLtJ_P0081977 B3gnt8 protein_coding protein_coding MGP_NODShiLtJ_T0081978.1 MGP_NODShiLtJ_G0031685.1 mouse_genomes_project 7 25550042 25551885 + B3gnt8 protein_coding retained_intron MGP_NODShiLtJ_T0082940.1 MGP_NODShiLtJ_G0031907.1 mouse_genomes_project 7 36735008 36804749 - MGP_NODShiLtJ_P0082940 protein_coding protein_coding MGP_NODShiLtJ_T0082941.1 MGP_NODShiLtJ_G0031907.1 mouse_genomes_project 7 36737101 36804750 - MGP_NODShiLtJ_P0082941 protein_coding protein_coding MGP_NODShiLtJ_T0082942.1 MGP_NODShiLtJ_G0031907.1 mouse_genomes_project 7 36759573 36804905 - MGP_NODShiLtJ_P0082942 protein_coding protein_coding MGP_NODShiLtJ_T0082943.1 MGP_NODShiLtJ_G0031907.1 mouse_genomes_project 7 36759576 36804957 - MGP_NODShiLtJ_P0082943 protein_coding protein_coding MGP_NODShiLtJ_T0082944.1 MGP_NODShiLtJ_G0031907.1 mouse_genomes_project 7 36759605 36771216 - MGP_NODShiLtJ_P0082944 protein_coding protein_coding MGP_NODShiLtJ_T0082945.1 MGP_NODShiLtJ_G0031907.1 mouse_genomes_project 7 36775042 36804905 - MGP_NODShiLtJ_P0082945 protein_coding protein_coding MGP_NODShiLtJ_T0080900.1 MGP_NODShiLtJ_G0031342.1 mouse_genomes_project 7 643361 651522 - MGP_NODShiLtJ_P0080900 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081942.1 MGP_NODShiLtJ_G0031676.1 mouse_genomes_project 7 25176378 25179052 + Tmem145 protein_coding retained_intron MGP_NODShiLtJ_T0081943.1 MGP_NODShiLtJ_G0031676.1 mouse_genomes_project 7 25176380 25186289 + MGP_NODShiLtJ_P0081943 Tmem145 protein_coding protein_coding MGP_NODShiLtJ_T0081944.1 MGP_NODShiLtJ_G0031676.1 mouse_genomes_project 7 25176380 25186276 + MGP_NODShiLtJ_P0081944 Tmem145 protein_coding protein_coding MGP_NODShiLtJ_T0081945.1 MGP_NODShiLtJ_G0031676.1 mouse_genomes_project 7 25185133 25186286 + Tmem145 protein_coding retained_intron MGP_NODShiLtJ_T0018249.1 MGP_NODShiLtJ_G0015554.1 mouse_genomes_project 7 138922143 138932017 - Gm26974 processed_transcript lincRNA MGP_NODShiLtJ_T0018250.1 MGP_NODShiLtJ_G0015554.1 mouse_genomes_project 7 138929582 138931570 - Gm26974 processed_transcript lincRNA MGP_NODShiLtJ_T0018251.1 MGP_NODShiLtJ_G0015554.1 mouse_genomes_project 7 138929584 138931074 - Gm26974 processed_transcript retained_intron MGP_NODShiLtJ_T0005206.1 MGP_NODShiLtJ_G0004417.1 mouse_genomes_project 7 111486073 111491696 + Gm15635 antisense antisense MGP_NODShiLtJ_T0005207.1 MGP_NODShiLtJ_G0004417.1 mouse_genomes_project 7 111489775 111491607 + Gm15635 antisense antisense MGP_NODShiLtJ_T0005208.1 MGP_NODShiLtJ_G0004417.1 mouse_genomes_project 7 111489827 111492069 + Gm15635 antisense antisense MGP_NODShiLtJ_T0081094.1 MGP_NODShiLtJ_G0031385.1 mouse_genomes_project 7 2200139 2206423 - MGP_NODShiLtJ_P0081094 Fiz1 protein_coding protein_coding MGP_NODShiLtJ_T0081095.1 MGP_NODShiLtJ_G0031385.1 mouse_genomes_project 7 2200139 2207430 - MGP_NODShiLtJ_P0081095 Fiz1 protein_coding protein_coding MGP_NODShiLtJ_T0081096.1 MGP_NODShiLtJ_G0031385.1 mouse_genomes_project 7 2200139 2207874 - MGP_NODShiLtJ_P0081096 Fiz1 protein_coding protein_coding MGP_NODShiLtJ_T0085211.1 MGP_NODShiLtJ_G0032528.1 mouse_genomes_project 7 117263693 117271316 - MGP_NODShiLtJ_P0085211 protein_coding protein_coding MGP_NODShiLtJ_T0102101.1 MGP_NODShiLtJ_G0040268.1 mouse_genomes_project 7 16147812 16148803 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082822.1 MGP_NODShiLtJ_G0031881.1 mouse_genomes_project 7 32165299 32168237 + MGP_NODShiLtJ_P0082822 Scgb1b3 protein_coding protein_coding MGP_NODShiLtJ_T0085831.1 MGP_NODShiLtJ_G0032737.1 mouse_genomes_project 7 135065304 135168436 + MGP_NODShiLtJ_P0085831 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085832.1 MGP_NODShiLtJ_G0032737.1 mouse_genomes_project 7 135080635 135253457 + MGP_NODShiLtJ_P0085832 protein_coding protein_coding MGP_NODShiLtJ_T0085833.1 MGP_NODShiLtJ_G0032737.1 mouse_genomes_project 7 135080635 135253457 + MGP_NODShiLtJ_P0085833 protein_coding protein_coding MGP_NODShiLtJ_T0085834.1 MGP_NODShiLtJ_G0032737.1 mouse_genomes_project 7 135164158 135182072 + protein_coding retained_intron MGP_NODShiLtJ_T0015813.1 MGP_NODShiLtJ_G0013921.1 mouse_genomes_project 7 151888562 151889548 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015589.1 MGP_NODShiLtJ_G0013697.1 mouse_genomes_project 7 15396557 15397296 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084355.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89140522 89151275 - MGP_NODShiLtJ_P0084355 Wdr73 protein_coding protein_coding MGP_NODShiLtJ_T0084356.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89140523 89151238 - Wdr73 protein_coding retained_intron MGP_NODShiLtJ_T0084357.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89140523 89151238 - Wdr73 protein_coding retained_intron MGP_NODShiLtJ_T0084358.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89141050 89151240 - Wdr73 protein_coding retained_intron MGP_NODShiLtJ_T0084359.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89142785 89151225 - Wdr73 protein_coding processed_transcript MGP_NODShiLtJ_T0084360.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89142849 89151226 - MGP_NODShiLtJ_P0084360 Wdr73 protein_coding protein_coding MGP_NODShiLtJ_T0084361.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89142850 89150725 - Wdr73 protein_coding processed_transcript MGP_NODShiLtJ_T0084362.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89143489 89150510 - Wdr73 protein_coding processed_transcript MGP_NODShiLtJ_T0084363.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89147732 89151250 - Wdr73 protein_coding processed_transcript MGP_NODShiLtJ_T0084364.1 MGP_NODShiLtJ_G0032237.1 mouse_genomes_project 7 89150678 89151238 - Wdr73 protein_coding processed_transcript MGP_NODShiLtJ_T0008761.1 MGP_NODShiLtJ_G0007073.1 mouse_genomes_project 7 37398199 37401259 + Gm45143 lincRNA lincRNA MGP_NODShiLtJ_T0082652.1 MGP_NODShiLtJ_G0031851.1 mouse_genomes_project 7 31323889 31338719 - MGP_NODShiLtJ_P0082652 Haus5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082653.1 MGP_NODShiLtJ_G0031851.1 mouse_genomes_project 7 31323897 31338724 - MGP_NODShiLtJ_P0082653 Haus5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082654.1 MGP_NODShiLtJ_G0031851.1 mouse_genomes_project 7 31323902 31338785 - MGP_NODShiLtJ_P0082654 Haus5 protein_coding protein_coding MGP_NODShiLtJ_T0082655.1 MGP_NODShiLtJ_G0031851.1 mouse_genomes_project 7 31324124 31329857 - Haus5 protein_coding retained_intron MGP_NODShiLtJ_T0082656.1 MGP_NODShiLtJ_G0031851.1 mouse_genomes_project 7 31330413 31331815 - Haus5 protein_coding retained_intron MGP_NODShiLtJ_T0082657.1 MGP_NODShiLtJ_G0031851.1 mouse_genomes_project 7 31330941 31338751 - Haus5 protein_coding retained_intron MGP_NODShiLtJ_T0082658.1 MGP_NODShiLtJ_G0031851.1 mouse_genomes_project 7 31331699 31333716 - Haus5 protein_coding retained_intron MGP_NODShiLtJ_T0084029.1 MGP_NODShiLtJ_G0032180.1 mouse_genomes_project 7 74955660 74989433 - MGP_NODShiLtJ_P0084029 Pgpep1l protein_coding protein_coding MGP_NODShiLtJ_T0010814.1 MGP_NODShiLtJ_G0008947.1 mouse_genomes_project 7 141712613 141712672 - Mir7059 miRNA miRNA MGP_NODShiLtJ_T0084572.1 MGP_NODShiLtJ_G0032311.1 mouse_genomes_project 7 100181588 100182688 + MGP_NODShiLtJ_P0084572 protein_coding protein_coding MGP_NODShiLtJ_T0015810.1 MGP_NODShiLtJ_G0013918.1 mouse_genomes_project 7 144453088 144453846 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102074.1 MGP_NODShiLtJ_G0040241.1 mouse_genomes_project 7 10185998 10186823 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086929.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155296027 155333006 + MGP_NODShiLtJ_P0086929 Lrrc27 protein_coding protein_coding MGP_NODShiLtJ_T0086930.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155296050 155302507 + MGP_NODShiLtJ_P0086930 Lrrc27 protein_coding protein_coding MGP_NODShiLtJ_T0086931.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155296311 155314690 + MGP_NODShiLtJ_P0086931 Lrrc27 protein_coding protein_coding MGP_NODShiLtJ_T0086932.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155298972 155307104 + MGP_NODShiLtJ_P0086932 Lrrc27 protein_coding protein_coding MGP_NODShiLtJ_T0086933.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155304826 155311787 + Lrrc27 protein_coding processed_transcript MGP_NODShiLtJ_T0086934.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155306581 155311880 + Lrrc27 protein_coding retained_intron MGP_NODShiLtJ_T0086935.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155319617 155332998 + Lrrc27 protein_coding processed_transcript MGP_NODShiLtJ_T0086936.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155324393 155332999 + Lrrc27 protein_coding processed_transcript MGP_NODShiLtJ_T0086937.1 MGP_NODShiLtJ_G0032955.1 mouse_genomes_project 7 155326948 155333003 + Lrrc27 protein_coding processed_transcript MGP_NODShiLtJ_T0087416.1 MGP_NODShiLtJ_G0033072.1 mouse_genomes_project 7 159454840 159457283 - MGP_NODShiLtJ_P0087416 Ascl2 protein_coding protein_coding MGP_NODShiLtJ_T0087417.1 MGP_NODShiLtJ_G0033072.1 mouse_genomes_project 7 159454847 159457283 - MGP_NODShiLtJ_P0087417 Ascl2 protein_coding protein_coding MGP_NODShiLtJ_T0081731.1 MGP_NODShiLtJ_G0031617.1 mouse_genomes_project 7 23085584 23086736 - MGP_NODShiLtJ_P0081731 protein_coding protein_coding MGP_NODShiLtJ_T0010724.1 MGP_NODShiLtJ_G0008857.1 mouse_genomes_project 7 133989 134058 + Mir295 miRNA miRNA MGP_NODShiLtJ_T0002225.1 MGP_NODShiLtJ_G0002136.1 mouse_genomes_project 7 87373639 87376668 + TEC TEC MGP_NODShiLtJ_T0084880.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112575187 112589610 - MGP_NODShiLtJ_P0084880 Plekhb1 protein_coding protein_coding MGP_NODShiLtJ_T0084881.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112575190 112588142 - MGP_NODShiLtJ_P0084881 Plekhb1 protein_coding protein_coding MGP_NODShiLtJ_T0084882.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112575190 112593595 - MGP_NODShiLtJ_P0084882 Plekhb1 protein_coding protein_coding MGP_NODShiLtJ_T0084883.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112575190 112593546 - MGP_NODShiLtJ_P0084883 Plekhb1 protein_coding protein_coding MGP_NODShiLtJ_T0084884.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112575194 112589618 - MGP_NODShiLtJ_P0084884 Plekhb1 protein_coding protein_coding MGP_NODShiLtJ_T0084885.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112576098 112584953 - Plekhb1 protein_coding retained_intron MGP_NODShiLtJ_T0084886.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112576240 112593490 - MGP_NODShiLtJ_P0084886 Plekhb1 protein_coding protein_coding MGP_NODShiLtJ_T0084887.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112576862 112588265 - MGP_NODShiLtJ_P0084887 Plekhb1 protein_coding protein_coding MGP_NODShiLtJ_T0084888.1 MGP_NODShiLtJ_G0032383.1 mouse_genomes_project 7 112576930 112589584 - MGP_NODShiLtJ_P0084888 Plekhb1 protein_coding protein_coding MGP_NODShiLtJ_T0080996.1 MGP_NODShiLtJ_G0031359.1 mouse_genomes_project 7 1601646 1603106 - Tnni3 protein_coding retained_intron MGP_NODShiLtJ_T0080997.1 MGP_NODShiLtJ_G0031359.1 mouse_genomes_project 7 1601646 1607334 - MGP_NODShiLtJ_P0080997 Tnni3 protein_coding protein_coding MGP_NODShiLtJ_T0080998.1 MGP_NODShiLtJ_G0031359.1 mouse_genomes_project 7 1601649 1605374 - Tnni3 protein_coding retained_intron MGP_NODShiLtJ_T0080999.1 MGP_NODShiLtJ_G0031359.1 mouse_genomes_project 7 1605244 1607600 - MGP_NODShiLtJ_P0080999 Tnni3 protein_coding protein_coding MGP_NODShiLtJ_T0081000.1 MGP_NODShiLtJ_G0031359.1 mouse_genomes_project 7 1605283 1609035 - MGP_NODShiLtJ_P0081000 Tnni3 protein_coding protein_coding MGP_NODShiLtJ_T0081001.1 MGP_NODShiLtJ_G0031359.1 mouse_genomes_project 7 1605848 1607248 - Tnni3 protein_coding retained_intron MGP_NODShiLtJ_T0081002.1 MGP_NODShiLtJ_G0031359.1 mouse_genomes_project 7 1606146 1607298 - Tnni3 protein_coding retained_intron MGP_NODShiLtJ_T0015607.1 MGP_NODShiLtJ_G0013715.1 mouse_genomes_project 7 24488889 24489226 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005181.1 MGP_NODShiLtJ_G0004400.1 mouse_genomes_project 7 88234801 88248355 - Gm21057 antisense antisense MGP_NODShiLtJ_T0005182.1 MGP_NODShiLtJ_G0004400.1 mouse_genomes_project 7 88246874 88248375 - Gm21057 antisense antisense MGP_NODShiLtJ_T0083593.1 MGP_NODShiLtJ_G0032075.1 mouse_genomes_project 7 48926339 48985150 + MGP_NODShiLtJ_P0083593 Nomo1 protein_coding protein_coding MGP_NODShiLtJ_T0083594.1 MGP_NODShiLtJ_G0032075.1 mouse_genomes_project 7 48947097 48947870 + Nomo1 protein_coding retained_intron MGP_NODShiLtJ_T0083595.1 MGP_NODShiLtJ_G0032075.1 mouse_genomes_project 7 48952301 48955325 + Nomo1 protein_coding retained_intron MGP_NODShiLtJ_T0083596.1 MGP_NODShiLtJ_G0032075.1 mouse_genomes_project 7 48956597 48959372 + Nomo1 protein_coding retained_intron MGP_NODShiLtJ_T0083597.1 MGP_NODShiLtJ_G0032075.1 mouse_genomes_project 7 48983582 48984742 + Nomo1 protein_coding retained_intron MGP_NODShiLtJ_T0085610.1 MGP_NODShiLtJ_G0032689.1 mouse_genomes_project 7 128321993 128335256 - MGP_NODShiLtJ_P0085610 Psma1 protein_coding protein_coding MGP_NODShiLtJ_T0085611.1 MGP_NODShiLtJ_G0032689.1 mouse_genomes_project 7 128322183 128335164 - Psma1 protein_coding processed_transcript MGP_NODShiLtJ_T0085612.1 MGP_NODShiLtJ_G0032689.1 mouse_genomes_project 7 128328532 128335192 - Psma1 protein_coding retained_intron MGP_NODShiLtJ_T0085613.1 MGP_NODShiLtJ_G0032689.1 mouse_genomes_project 7 128331846 128335181 - Psma1 protein_coding retained_intron MGP_NODShiLtJ_T0081941.1 MGP_NODShiLtJ_G0031675.1 mouse_genomes_project 7 25171728 25174451 + MGP_NODShiLtJ_P0081941 Prr19 protein_coding protein_coding MGP_NODShiLtJ_T0002233.1 MGP_NODShiLtJ_G0002144.1 mouse_genomes_project 7 88050830 88053133 - TEC TEC MGP_NODShiLtJ_T0085118.1 MGP_NODShiLtJ_G0032459.1 mouse_genomes_project 7 115572694 115573642 + MGP_NODShiLtJ_P0085118 Olfr599 protein_coding protein_coding MGP_NODShiLtJ_T0102057.1 MGP_NODShiLtJ_G0040224.1 mouse_genomes_project 7 7992225 7993130 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087079.1 MGP_NODShiLtJ_G0033007.1 mouse_genomes_project 7 157185465 157203199 + MGP_NODShiLtJ_P0087079 Nlrp6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087080.1 MGP_NODShiLtJ_G0033007.1 mouse_genomes_project 7 157194901 157202540 + MGP_NODShiLtJ_P0087080 Nlrp6 protein_coding protein_coding MGP_NODShiLtJ_T0087081.1 MGP_NODShiLtJ_G0033007.1 mouse_genomes_project 7 157195070 157201549 + MGP_NODShiLtJ_P0087081 Nlrp6 protein_coding protein_coding MGP_NODShiLtJ_T0087082.1 MGP_NODShiLtJ_G0033007.1 mouse_genomes_project 7 157196105 157196855 + Nlrp6 protein_coding retained_intron MGP_NODShiLtJ_T0102140.1 MGP_NODShiLtJ_G0040306.1 mouse_genomes_project 7 46812854 46870041 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099522.1 MGP_NODShiLtJ_G0037916.1 mouse_genomes_project 7 141695937 141696044 - Gm24596 snRNA snRNA MGP_NODShiLtJ_T0085485.1 MGP_NODShiLtJ_G0032660.1 mouse_genomes_project 7 123706065 123746894 + MGP_NODShiLtJ_P0085485 Ipo7 protein_coding protein_coding MGP_NODShiLtJ_T0087418.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159504768 159519171 + MGP_NODShiLtJ_P0087418 Tspan32 protein_coding protein_coding MGP_NODShiLtJ_T0087419.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159504782 159507208 + Tspan32 protein_coding retained_intron MGP_NODShiLtJ_T0087420.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159505360 159519329 + MGP_NODShiLtJ_P0087420 Tspan32 protein_coding protein_coding MGP_NODShiLtJ_T0087421.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159505385 159519168 + MGP_NODShiLtJ_P0087421 Tspan32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087422.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159505393 159519171 + MGP_NODShiLtJ_P0087422 Tspan32 protein_coding protein_coding MGP_NODShiLtJ_T0087423.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159505407 159519171 + MGP_NODShiLtJ_P0087423 Tspan32 protein_coding protein_coding MGP_NODShiLtJ_T0087424.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159505421 159519171 + MGP_NODShiLtJ_P0087424 Tspan32 protein_coding protein_coding MGP_NODShiLtJ_T0087425.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159505421 159519171 + MGP_NODShiLtJ_P0087425 Tspan32 protein_coding protein_coding MGP_NODShiLtJ_T0087426.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159505650 159517358 + MGP_NODShiLtJ_P0087426 Tspan32 protein_coding protein_coding MGP_NODShiLtJ_T0087427.1 MGP_NODShiLtJ_G0033073.1 mouse_genomes_project 7 159517093 159518588 + Tspan32 protein_coding retained_intron MGP_NODShiLtJ_T0002155.1 MGP_NODShiLtJ_G0002067.1 mouse_genomes_project 7 24416662 24416900 + TEC TEC MGP_NODShiLtJ_T0008780.1 MGP_NODShiLtJ_G0007086.1 mouse_genomes_project 7 42075291 42178187 - Gm28807 lincRNA lincRNA MGP_NODShiLtJ_T0084770.1 MGP_NODShiLtJ_G0032354.1 mouse_genomes_project 7 111018129 111037660 - MGP_NODShiLtJ_P0084770 Mogat2 protein_coding protein_coding MGP_NODShiLtJ_T0084771.1 MGP_NODShiLtJ_G0032354.1 mouse_genomes_project 7 111025644 111037635 - Mogat2 protein_coding processed_transcript MGP_NODShiLtJ_T0102145.1 MGP_NODShiLtJ_G0040311.1 mouse_genomes_project 7 50649307 50675131 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005132.1 MGP_NODShiLtJ_G0004365.1 mouse_genomes_project 7 31408740 31428784 + antisense antisense MGP_NODShiLtJ_T0010831.1 MGP_NODShiLtJ_G0008964.1 mouse_genomes_project 7 159045282 159045366 - Mir675 miRNA miRNA MGP_NODShiLtJ_T0087152.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157587349 157591065 - MGP_NODShiLtJ_P0087152 Irf7 protein_coding protein_coding MGP_NODShiLtJ_T0087153.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157587826 157591125 - MGP_NODShiLtJ_P0087153 Irf7 protein_coding protein_coding MGP_NODShiLtJ_T0087154.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157587827 157591067 - MGP_NODShiLtJ_P0087154 Irf7 protein_coding protein_coding MGP_NODShiLtJ_T0087155.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157587830 157591066 - Irf7 protein_coding retained_intron MGP_NODShiLtJ_T0087156.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157588075 157589936 - MGP_NODShiLtJ_P0087156 Irf7 protein_coding protein_coding MGP_NODShiLtJ_T0087157.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157588434 157589775 - Irf7 protein_coding retained_intron MGP_NODShiLtJ_T0087158.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157588616 157590688 - Irf7 protein_coding processed_transcript MGP_NODShiLtJ_T0087159.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157588866 157590117 - Irf7 protein_coding retained_intron MGP_NODShiLtJ_T0087160.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157589443 157590351 - Irf7 protein_coding retained_intron MGP_NODShiLtJ_T0087161.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157589858 157590628 - Irf7 protein_coding retained_intron MGP_NODShiLtJ_T0087162.1 MGP_NODShiLtJ_G0033026.1 mouse_genomes_project 7 157590019 157591065 - Irf7 protein_coding processed_transcript MGP_NODShiLtJ_T0082127.1 MGP_NODShiLtJ_G0031725.1 mouse_genomes_project 7 27729908 27750146 + MGP_NODShiLtJ_P0082127 Blvrb protein_coding protein_coding MGP_NODShiLtJ_T0082128.1 MGP_NODShiLtJ_G0031725.1 mouse_genomes_project 7 27729962 27750000 + MGP_NODShiLtJ_P0082128 Blvrb protein_coding protein_coding MGP_NODShiLtJ_T0082129.1 MGP_NODShiLtJ_G0031725.1 mouse_genomes_project 7 27729984 27741695 + MGP_NODShiLtJ_P0082129 Blvrb protein_coding protein_coding MGP_NODShiLtJ_T0082130.1 MGP_NODShiLtJ_G0031725.1 mouse_genomes_project 7 27734348 27749986 + MGP_NODShiLtJ_P0082130 Blvrb protein_coding protein_coding MGP_NODShiLtJ_T0082131.1 MGP_NODShiLtJ_G0031725.1 mouse_genomes_project 7 27734374 27744724 + Blvrb protein_coding processed_transcript MGP_NODShiLtJ_T0102214.1 MGP_NODShiLtJ_G0040380.1 mouse_genomes_project 7 143660539 143660733 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081201.1 MGP_NODShiLtJ_G0031445.1 mouse_genomes_project 7 9980718 9981693 - MGP_NODShiLtJ_P0081201 Vmn1r76 protein_coding protein_coding MGP_NODShiLtJ_T0008744.1 MGP_NODShiLtJ_G0007057.1 mouse_genomes_project 7 30449657 30455604 + Gm26554 lincRNA lincRNA MGP_NODShiLtJ_T0086631.1 MGP_NODShiLtJ_G0032889.1 mouse_genomes_project 7 143710791 143760359 - MGP_NODShiLtJ_P0086631 Rgs10 protein_coding protein_coding MGP_NODShiLtJ_T0086632.1 MGP_NODShiLtJ_G0032889.1 mouse_genomes_project 7 143711055 143733658 - Rgs10 protein_coding processed_transcript MGP_NODShiLtJ_T0086633.1 MGP_NODShiLtJ_G0032889.1 mouse_genomes_project 7 143711171 143714589 - Rgs10 protein_coding processed_transcript MGP_NODShiLtJ_T0086634.1 MGP_NODShiLtJ_G0032889.1 mouse_genomes_project 7 143728765 143744851 - Rgs10 protein_coding retained_intron MGP_NODShiLtJ_T0086635.1 MGP_NODShiLtJ_G0032889.1 mouse_genomes_project 7 143743282 143760349 - MGP_NODShiLtJ_P0086635 Rgs10 protein_coding protein_coding MGP_NODShiLtJ_T0086636.1 MGP_NODShiLtJ_G0032889.1 mouse_genomes_project 7 143743553 143760944 - MGP_NODShiLtJ_P0086636 Rgs10 protein_coding protein_coding MGP_NODShiLtJ_T0081030.1 MGP_NODShiLtJ_G0031367.1 mouse_genomes_project 7 1831431 1851435 - MGP_NODShiLtJ_P0081030 Tmem150b protein_coding protein_coding MGP_NODShiLtJ_T0081032.1 MGP_NODShiLtJ_G0031367.1 mouse_genomes_project 7 1840254 1851268 - MGP_NODShiLtJ_P0081032 Tmem150b protein_coding protein_coding MGP_NODShiLtJ_T0008866.1 MGP_NODShiLtJ_G0007148.1 mouse_genomes_project 7 88342460 88344063 + Gm45202 lincRNA lincRNA MGP_NODShiLtJ_T0085191.1 MGP_NODShiLtJ_G0032517.1 mouse_genomes_project 7 116962168 116976441 - protein_coding retained_intron MGP_NODShiLtJ_T0085192.1 MGP_NODShiLtJ_G0032517.1 mouse_genomes_project 7 116963462 116965429 - MGP_NODShiLtJ_P0085192 protein_coding protein_coding MGP_NODShiLtJ_T0085193.1 MGP_NODShiLtJ_G0032517.1 mouse_genomes_project 7 116963636 116972908 - MGP_NODShiLtJ_P0085193 protein_coding protein_coding MGP_NODShiLtJ_T0085194.1 MGP_NODShiLtJ_G0032517.1 mouse_genomes_project 7 116964370 116965426 - protein_coding retained_intron MGP_NODShiLtJ_T0085195.1 MGP_NODShiLtJ_G0032517.1 mouse_genomes_project 7 116968193 116976339 - MGP_NODShiLtJ_P0085195 protein_coding protein_coding MGP_NODShiLtJ_T0083081.1 MGP_NODShiLtJ_G0031943.1 mouse_genomes_project 7 46032942 46038851 + MGP_NODShiLtJ_P0083081 Lim2 protein_coding protein_coding MGP_NODShiLtJ_T0085390.1 MGP_NODShiLtJ_G0032610.1 mouse_genomes_project 7 121304204 121305287 + MGP_NODShiLtJ_P0085390 Olfr472 protein_coding protein_coding MGP_NODShiLtJ_T0085451.1 MGP_NODShiLtJ_G0032651.1 mouse_genomes_project 7 123155754 123251665 - MGP_NODShiLtJ_P0085451 St5 protein_coding protein_coding MGP_NODShiLtJ_T0085452.1 MGP_NODShiLtJ_G0032651.1 mouse_genomes_project 7 123155754 123251665 - MGP_NODShiLtJ_P0085452 St5 protein_coding protein_coding MGP_NODShiLtJ_T0085453.1 MGP_NODShiLtJ_G0032651.1 mouse_genomes_project 7 123155763 123251086 - MGP_NODShiLtJ_P0085453 St5 protein_coding protein_coding MGP_NODShiLtJ_T0085454.1 MGP_NODShiLtJ_G0032651.1 mouse_genomes_project 7 123155763 123251086 - MGP_NODShiLtJ_P0085454 St5 protein_coding protein_coding MGP_NODShiLtJ_T0005201.1 MGP_NODShiLtJ_G0004414.1 mouse_genomes_project 7 108432507 108437752 - Gm44633 antisense antisense MGP_NODShiLtJ_T0102077.1 MGP_NODShiLtJ_G0040244.1 mouse_genomes_project 7 10361520 10362471 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100745.1 MGP_NODShiLtJ_G0039139.1 mouse_genomes_project 7 64800419 64800498 - Gm24966 snoRNA snoRNA MGP_NODShiLtJ_T0085899.1 MGP_NODShiLtJ_G0032757.1 mouse_genomes_project 7 136888366 136903823 + MGP_NODShiLtJ_P0085899 Ubfd1 protein_coding protein_coding MGP_NODShiLtJ_T0085900.1 MGP_NODShiLtJ_G0032757.1 mouse_genomes_project 7 136888399 136899261 + Ubfd1 protein_coding retained_intron MGP_NODShiLtJ_T0085901.1 MGP_NODShiLtJ_G0032757.1 mouse_genomes_project 7 136888631 136892598 + Ubfd1 protein_coding retained_intron MGP_NODShiLtJ_T0085902.1 MGP_NODShiLtJ_G0032757.1 mouse_genomes_project 7 136888638 136890171 + Ubfd1 protein_coding processed_transcript MGP_NODShiLtJ_T0085903.1 MGP_NODShiLtJ_G0032757.1 mouse_genomes_project 7 136890090 136900240 + MGP_NODShiLtJ_P0085903 Ubfd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002226.1 MGP_NODShiLtJ_G0002137.1 mouse_genomes_project 7 87397026 87400928 + TEC TEC MGP_NODShiLtJ_T0082725.1 MGP_NODShiLtJ_G0031866.1 mouse_genomes_project 7 31681508 31683173 - MGP_NODShiLtJ_P0082725 Hamp protein_coding protein_coding MGP_NODShiLtJ_T0084236.1 MGP_NODShiLtJ_G0032221.1 mouse_genomes_project 7 88419212 88424608 - MGP_NODShiLtJ_P0084236 Cib1 protein_coding protein_coding MGP_NODShiLtJ_T0084237.1 MGP_NODShiLtJ_G0032221.1 mouse_genomes_project 7 88419220 88424672 - MGP_NODShiLtJ_P0084237 Cib1 protein_coding protein_coding MGP_NODShiLtJ_T0084238.1 MGP_NODShiLtJ_G0032221.1 mouse_genomes_project 7 88419220 88424613 - MGP_NODShiLtJ_P0084238 Cib1 protein_coding protein_coding MGP_NODShiLtJ_T0084239.1 MGP_NODShiLtJ_G0032221.1 mouse_genomes_project 7 88419893 88422402 - Cib1 protein_coding retained_intron MGP_NODShiLtJ_T0084240.1 MGP_NODShiLtJ_G0032221.1 mouse_genomes_project 7 88420214 88424645 - Cib1 protein_coding retained_intron MGP_NODShiLtJ_T0084241.1 MGP_NODShiLtJ_G0032221.1 mouse_genomes_project 7 88420454 88424853 - MGP_NODShiLtJ_P0084241 Cib1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084242.1 MGP_NODShiLtJ_G0032221.1 mouse_genomes_project 7 88423493 88424779 - Cib1 protein_coding retained_intron MGP_NODShiLtJ_T0084243.1 MGP_NODShiLtJ_G0032221.1 mouse_genomes_project 7 88423613 88424629 - Cib1 protein_coding retained_intron MGP_NODShiLtJ_T0010762.1 MGP_NODShiLtJ_G0008895.1 mouse_genomes_project 7 47900166 47900231 + Mir150 miRNA miRNA MGP_NODShiLtJ_T0010766.1 MGP_NODShiLtJ_G0008899.1 mouse_genomes_project 7 50928743 50928853 + Gm22427 miRNA miRNA MGP_NODShiLtJ_T0084595.1 MGP_NODShiLtJ_G0032318.1 mouse_genomes_project 7 100742589 100751154 - MGP_NODShiLtJ_P0084595 Tmem126b protein_coding protein_coding MGP_NODShiLtJ_T0084596.1 MGP_NODShiLtJ_G0032318.1 mouse_genomes_project 7 100744320 100751148 - Tmem126b protein_coding retained_intron MGP_NODShiLtJ_T0085294.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613276 118616893 + MGP_NODShiLtJ_P0085294 protein_coding protein_coding MGP_NODShiLtJ_T0085295.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613668 118615061 + MGP_NODShiLtJ_P0085295 protein_coding protein_coding MGP_NODShiLtJ_T0085296.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613768 118625456 + MGP_NODShiLtJ_P0085296 protein_coding protein_coding MGP_NODShiLtJ_T0085297.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613771 118615043 + MGP_NODShiLtJ_P0085297 protein_coding protein_coding MGP_NODShiLtJ_T0085299.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613780 118615003 + protein_coding retained_intron MGP_NODShiLtJ_T0085300.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613780 118626003 + MGP_NODShiLtJ_P0085300 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085301.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613783 118615057 + MGP_NODShiLtJ_P0085301 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085302.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613786 118630069 + MGP_NODShiLtJ_P0085302 protein_coding protein_coding MGP_NODShiLtJ_T0085303.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613787 118616888 + MGP_NODShiLtJ_P0085303 protein_coding protein_coding MGP_NODShiLtJ_T0085305.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613805 118614967 + protein_coding processed_transcript MGP_NODShiLtJ_T0085306.1 MGP_NODShiLtJ_G0032566.1 mouse_genomes_project 7 118613887 118614501 + protein_coding retained_intron MGP_NODShiLtJ_T0015602.1 MGP_NODShiLtJ_G0013710.1 mouse_genomes_project 7 23738309 23738618 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086151.1 MGP_NODShiLtJ_G0032800.1 mouse_genomes_project 7 141839237 141845436 - MGP_NODShiLtJ_P0086151 Slx1b protein_coding protein_coding MGP_NODShiLtJ_T0086152.1 MGP_NODShiLtJ_G0032800.1 mouse_genomes_project 7 141840236 141845291 - Slx1b protein_coding retained_intron MGP_NODShiLtJ_T0086153.1 MGP_NODShiLtJ_G0032800.1 mouse_genomes_project 7 141840676 141845397 - Slx1b protein_coding retained_intron MGP_NODShiLtJ_T0086154.1 MGP_NODShiLtJ_G0032800.1 mouse_genomes_project 7 141840676 141845376 - MGP_NODShiLtJ_P0086154 Slx1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085389.1 MGP_NODShiLtJ_G0032609.1 mouse_genomes_project 7 121249836 121250713 + MGP_NODShiLtJ_P0085389 protein_coding protein_coding MGP_NODShiLtJ_T0099510.1 MGP_NODShiLtJ_G0037904.1 mouse_genomes_project 7 122678359 122678466 - Gm25450 snRNA snRNA MGP_NODShiLtJ_T0005166.1 MGP_NODShiLtJ_G0004389.1 mouse_genomes_project 7 62527600 62550970 + Gm9962 antisense antisense MGP_NODShiLtJ_T0081898.1 MGP_NODShiLtJ_G0031667.1 mouse_genomes_project 7 24906648 24911103 + Zfp574 protein_coding processed_transcript MGP_NODShiLtJ_T0081899.1 MGP_NODShiLtJ_G0031667.1 mouse_genomes_project 7 24906727 24911462 + Zfp574 protein_coding processed_transcript MGP_NODShiLtJ_T0081900.1 MGP_NODShiLtJ_G0031667.1 mouse_genomes_project 7 24911291 24917579 + MGP_NODShiLtJ_P0081900 Zfp574 protein_coding protein_coding MGP_NODShiLtJ_T0081901.1 MGP_NODShiLtJ_G0031667.1 mouse_genomes_project 7 24911370 24916567 + MGP_NODShiLtJ_P0081901 Zfp574 protein_coding protein_coding MGP_NODShiLtJ_T0098080.1 MGP_NODShiLtJ_G0036492.1 mouse_genomes_project 7 77831156 77831241 + Gm24880 rRNA rRNA MGP_NODShiLtJ_T0011590.1 MGP_NODShiLtJ_G0009723.1 mouse_genomes_project 7 159763627 159764087 + Gm27395 misc_RNA misc_RNA MGP_NODShiLtJ_T0081347.1 MGP_NODShiLtJ_G0031501.1 mouse_genomes_project 7 14761041 14769281 - MGP_NODShiLtJ_P0081347 Gltscr2 protein_coding protein_coding MGP_NODShiLtJ_T0081348.1 MGP_NODShiLtJ_G0031501.1 mouse_genomes_project 7 14761052 14768947 - Gltscr2 protein_coding retained_intron MGP_NODShiLtJ_T0081349.1 MGP_NODShiLtJ_G0031501.1 mouse_genomes_project 7 14766039 14769252 - Gltscr2 protein_coding processed_transcript MGP_NODShiLtJ_T0084570.1 MGP_NODShiLtJ_G0032310.1 mouse_genomes_project 7 100152170 100181823 - MGP_NODShiLtJ_P0084570 Eed protein_coding protein_coding MGP_NODShiLtJ_T0084571.1 MGP_NODShiLtJ_G0032310.1 mouse_genomes_project 7 100177605 100181399 - Eed protein_coding processed_transcript MGP_NODShiLtJ_T0086772.1 MGP_NODShiLtJ_G0032917.1 mouse_genomes_project 7 147718477 147830587 - MGP_NODShiLtJ_P0086772 Cpxm2 protein_coding protein_coding MGP_NODShiLtJ_T0086773.1 MGP_NODShiLtJ_G0032917.1 mouse_genomes_project 7 147730289 147736544 - Cpxm2 protein_coding retained_intron MGP_NODShiLtJ_T0086774.1 MGP_NODShiLtJ_G0032917.1 mouse_genomes_project 7 147732722 147830470 - Cpxm2 protein_coding retained_intron MGP_NODShiLtJ_T0086775.1 MGP_NODShiLtJ_G0032917.1 mouse_genomes_project 7 147784826 147821461 - Cpxm2 protein_coding processed_transcript MGP_NODShiLtJ_T0081072.1 MGP_NODShiLtJ_G0031376.1 mouse_genomes_project 7 1975551 1986062 - MGP_NODShiLtJ_P0081072 Shisa7 protein_coding protein_coding MGP_NODShiLtJ_T0081073.1 MGP_NODShiLtJ_G0031376.1 mouse_genomes_project 7 1975552 1994558 - MGP_NODShiLtJ_P0081073 Shisa7 protein_coding protein_coding MGP_NODShiLtJ_T0081074.1 MGP_NODShiLtJ_G0031376.1 mouse_genomes_project 7 1978027 1994558 - MGP_NODShiLtJ_P0081074 Shisa7 protein_coding protein_coding MGP_NODShiLtJ_T0081075.1 MGP_NODShiLtJ_G0031376.1 mouse_genomes_project 7 1980177 1981127 - Shisa7 protein_coding retained_intron MGP_NODShiLtJ_T0081076.1 MGP_NODShiLtJ_G0031376.1 mouse_genomes_project 7 1981390 1984403 - Shisa7 protein_coding retained_intron MGP_NODShiLtJ_T0086592.1 MGP_NODShiLtJ_G0032881.1 mouse_genomes_project 7 143469164 143519583 + MGP_NODShiLtJ_P0086592 Itgad protein_coding protein_coding MGP_NODShiLtJ_T0086593.1 MGP_NODShiLtJ_G0032881.1 mouse_genomes_project 7 143488340 143519586 + MGP_NODShiLtJ_P0086593 Itgad protein_coding protein_coding MGP_NODShiLtJ_T0086594.1 MGP_NODShiLtJ_G0032881.1 mouse_genomes_project 7 143488349 143519583 + MGP_NODShiLtJ_P0086594 Itgad protein_coding protein_coding MGP_NODShiLtJ_T0086595.1 MGP_NODShiLtJ_G0032881.1 mouse_genomes_project 7 143517829 143519586 + MGP_NODShiLtJ_P0086595 Itgad protein_coding protein_coding MGP_NODShiLtJ_T0086596.1 MGP_NODShiLtJ_G0032881.1 mouse_genomes_project 7 143518078 143539428 + MGP_NODShiLtJ_P0086596 Itgad protein_coding protein_coding MGP_NODShiLtJ_T0084810.1 MGP_NODShiLtJ_G0032368.1 mouse_genomes_project 7 111774353 111847212 - MGP_NODShiLtJ_P0084810 Rnf169 protein_coding protein_coding MGP_NODShiLtJ_T0084811.1 MGP_NODShiLtJ_G0032368.1 mouse_genomes_project 7 111789361 111826163 - Rnf169 protein_coding processed_transcript MGP_NODShiLtJ_T0086808.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148691468 148723445 - MGP_NODShiLtJ_P0086808 Ctbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086809.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148691474 148723203 - MGP_NODShiLtJ_P0086809 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086810.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148691480 148841986 - MGP_NODShiLtJ_P0086810 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086811.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148694057 148842187 - MGP_NODShiLtJ_P0086811 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086812.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148698164 148733446 - MGP_NODShiLtJ_P0086812 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086813.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148701631 148841021 - MGP_NODShiLtJ_P0086813 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086814.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148722421 148842292 - Ctbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0086815.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148722421 148842168 - Ctbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0086816.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148722611 148842166 - MGP_NODShiLtJ_P0086816 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086817.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148722685 148831139 - Ctbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0086818.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148722790 148739769 - Ctbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0086819.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148722808 148843730 - Ctbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0086820.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148723076 148841436 - MGP_NODShiLtJ_P0086820 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086821.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148723118 148842245 - MGP_NODShiLtJ_P0086821 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086822.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148735371 148844298 - MGP_NODShiLtJ_P0086822 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086823.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148735389 148830231 - MGP_NODShiLtJ_P0086823 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086824.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148735390 148842132 - MGP_NODShiLtJ_P0086824 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086825.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148735433 148843816 - MGP_NODShiLtJ_P0086825 Ctbp2 protein_coding protein_coding MGP_NODShiLtJ_T0086826.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148753780 148843816 - Ctbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0086827.1 MGP_NODShiLtJ_G0032926.1 mouse_genomes_project 7 148797907 148842004 - Ctbp2 protein_coding retained_intron MGP_NODShiLtJ_T0081386.1 MGP_NODShiLtJ_G0031510.1 mouse_genomes_project 7 15078717 15086861 - MGP_NODShiLtJ_P0081386 C5ar2 protein_coding protein_coding MGP_NODShiLtJ_T0081387.1 MGP_NODShiLtJ_G0031510.1 mouse_genomes_project 7 15078717 15088684 - MGP_NODShiLtJ_P0081387 C5ar2 protein_coding protein_coding MGP_NODShiLtJ_T0082832.1 MGP_NODShiLtJ_G0031888.1 mouse_genomes_project 7 35202728 35228688 - MGP_NODShiLtJ_P0082832 protein_coding protein_coding MGP_NODShiLtJ_T0082833.1 MGP_NODShiLtJ_G0031888.1 mouse_genomes_project 7 35203350 35222052 - protein_coding processed_transcript MGP_NODShiLtJ_T0082834.1 MGP_NODShiLtJ_G0031888.1 mouse_genomes_project 7 35203401 35212387 - protein_coding retained_intron MGP_NODShiLtJ_T0082835.1 MGP_NODShiLtJ_G0031888.1 mouse_genomes_project 7 35203411 35228130 - MGP_NODShiLtJ_P0082835 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084611.1 MGP_NODShiLtJ_G0032321.1 mouse_genomes_project 7 103273434 103326860 - MGP_NODShiLtJ_P0084611 Ankrd42 protein_coding protein_coding MGP_NODShiLtJ_T0084612.1 MGP_NODShiLtJ_G0032321.1 mouse_genomes_project 7 103275893 103326900 - MGP_NODShiLtJ_P0084612 Ankrd42 protein_coding protein_coding MGP_NODShiLtJ_T0084613.1 MGP_NODShiLtJ_G0032321.1 mouse_genomes_project 7 103275909 103326894 - MGP_NODShiLtJ_P0084613 Ankrd42 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084614.1 MGP_NODShiLtJ_G0032321.1 mouse_genomes_project 7 103290406 103295512 - Ankrd42 protein_coding retained_intron MGP_NODShiLtJ_T0084615.1 MGP_NODShiLtJ_G0032321.1 mouse_genomes_project 7 103294318 103326793 - Ankrd42 protein_coding retained_intron MGP_NODShiLtJ_T0084616.1 MGP_NODShiLtJ_G0032321.1 mouse_genomes_project 7 103294570 103326888 - Ankrd42 protein_coding processed_transcript MGP_NODShiLtJ_T0098443.1 MGP_NODShiLtJ_G0036844.1 mouse_genomes_project 7 3783743 3784326 + Gm16306 sense_intronic sense_intronic MGP_NODShiLtJ_T0084815.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111948058 111991861 - MGP_NODShiLtJ_P0084815 Pold3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084816.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111948063 111992003 - MGP_NODShiLtJ_P0084816 Pold3 protein_coding protein_coding MGP_NODShiLtJ_T0084817.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111949348 111991893 - MGP_NODShiLtJ_P0084817 Pold3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084818.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111949538 111962785 - Pold3 protein_coding retained_intron MGP_NODShiLtJ_T0084819.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111949617 111957540 - Pold3 protein_coding retained_intron MGP_NODShiLtJ_T0084820.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111965429 111969740 - Pold3 protein_coding retained_intron MGP_NODShiLtJ_T0084821.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111968110 111969613 - Pold3 protein_coding retained_intron MGP_NODShiLtJ_T0084822.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111968641 111991896 - Pold3 protein_coding processed_transcript MGP_NODShiLtJ_T0084823.1 MGP_NODShiLtJ_G0032370.1 mouse_genomes_project 7 111982696 111990345 - Pold3 protein_coding processed_transcript MGP_NODShiLtJ_T0083491.1 MGP_NODShiLtJ_G0032047.1 mouse_genomes_project 7 48389978 48402251 + MGP_NODShiLtJ_P0083491 Hsd17b14 protein_coding protein_coding MGP_NODShiLtJ_T0083492.1 MGP_NODShiLtJ_G0032047.1 mouse_genomes_project 7 48390022 48402682 + MGP_NODShiLtJ_P0083492 Hsd17b14 protein_coding protein_coding MGP_NODShiLtJ_T0083494.1 MGP_NODShiLtJ_G0032047.1 mouse_genomes_project 7 48391081 48402248 + Hsd17b14 protein_coding retained_intron MGP_NODShiLtJ_T0083495.1 MGP_NODShiLtJ_G0032047.1 mouse_genomes_project 7 48394023 48400939 + Hsd17b14 protein_coding retained_intron MGP_NODShiLtJ_T0083496.1 MGP_NODShiLtJ_G0032047.1 mouse_genomes_project 7 48396913 48401114 + Hsd17b14 protein_coding processed_transcript MGP_NODShiLtJ_T0083497.1 MGP_NODShiLtJ_G0032047.1 mouse_genomes_project 7 48396924 48401617 + Hsd17b14 protein_coding processed_transcript MGP_NODShiLtJ_T0083498.1 MGP_NODShiLtJ_G0032047.1 mouse_genomes_project 7 48397883 48401131 + Hsd17b14 protein_coding processed_transcript MGP_NODShiLtJ_T0085215.1 MGP_NODShiLtJ_G0032532.1 mouse_genomes_project 7 117313207 117319074 + MGP_NODShiLtJ_P0085215 Olfr661 protein_coding protein_coding MGP_NODShiLtJ_T0002268.1 MGP_NODShiLtJ_G0002179.1 mouse_genomes_project 7 143910162 143910772 + TEC TEC MGP_NODShiLtJ_T0015583.1 MGP_NODShiLtJ_G0013691.1 mouse_genomes_project 7 12062772 12062950 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002263.1 MGP_NODShiLtJ_G0002174.1 mouse_genomes_project 7 142899597 142900768 - TEC TEC MGP_NODShiLtJ_T0086390.1 MGP_NODShiLtJ_G0032844.1 mouse_genomes_project 7 142613564 142616233 - MGP_NODShiLtJ_P0086390 E430018J23Rik protein_coding protein_coding MGP_NODShiLtJ_T0102151.1 MGP_NODShiLtJ_G0040317.1 mouse_genomes_project 7 51691444 51692695 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087038.1 MGP_NODShiLtJ_G0032996.1 mouse_genomes_project 7 157029835 157041060 + MGP_NODShiLtJ_P0087038 Cyp2e1 protein_coding protein_coding MGP_NODShiLtJ_T0002202.1 MGP_NODShiLtJ_G0002114.1 mouse_genomes_project 7 79895701 79896202 + TEC TEC MGP_NODShiLtJ_T0008737.1 MGP_NODShiLtJ_G0007051.1 mouse_genomes_project 7 24768529 24771833 + Gm44970 lincRNA lincRNA MGP_NODShiLtJ_T0082209.1 MGP_NODShiLtJ_G0031746.1 mouse_genomes_project 7 28517699 28558834 + MGP_NODShiLtJ_P0082209 9530053A07Rik protein_coding protein_coding MGP_NODShiLtJ_T0082210.1 MGP_NODShiLtJ_G0031746.1 mouse_genomes_project 7 28518049 28533078 + 9530053A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0082211.1 MGP_NODShiLtJ_G0031746.1 mouse_genomes_project 7 28518049 28530747 + 9530053A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0082212.1 MGP_NODShiLtJ_G0031746.1 mouse_genomes_project 7 28518049 28558834 + MGP_NODShiLtJ_P0082212 9530053A07Rik protein_coding protein_coding MGP_NODShiLtJ_T0082027.1 MGP_NODShiLtJ_G0031695.1 mouse_genomes_project 7 25853500 25904009 + MGP_NODShiLtJ_P0082027 Cyp2b10 protein_coding protein_coding MGP_NODShiLtJ_T0082028.1 MGP_NODShiLtJ_G0031695.1 mouse_genomes_project 7 25853700 25903634 + MGP_NODShiLtJ_P0082028 Cyp2b10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082029.1 MGP_NODShiLtJ_G0031695.1 mouse_genomes_project 7 25875579 25876244 + Cyp2b10 protein_coding retained_intron MGP_NODShiLtJ_T0099472.1 MGP_NODShiLtJ_G0037866.1 mouse_genomes_project 7 11156024 11156132 + Gm26325 snRNA snRNA MGP_NODShiLtJ_T0085081.1 MGP_NODShiLtJ_G0032425.1 mouse_genomes_project 7 114706337 114707416 - MGP_NODShiLtJ_P0085081 Olfr551 protein_coding protein_coding MGP_NODShiLtJ_T0099487.1 MGP_NODShiLtJ_G0037881.1 mouse_genomes_project 7 56210982 56211138 - Gm22211 snRNA snRNA MGP_NODShiLtJ_T0082668.1 MGP_NODShiLtJ_G0031856.1 mouse_genomes_project 7 31395650 31399399 - MGP_NODShiLtJ_P0082668 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082669.1 MGP_NODShiLtJ_G0031856.1 mouse_genomes_project 7 31395655 31424043 - MGP_NODShiLtJ_P0082669 protein_coding protein_coding MGP_NODShiLtJ_T0082670.1 MGP_NODShiLtJ_G0031856.1 mouse_genomes_project 7 31395762 31414301 - MGP_NODShiLtJ_P0082670 protein_coding protein_coding MGP_NODShiLtJ_T0085131.1 MGP_NODShiLtJ_G0032472.1 mouse_genomes_project 7 115813884 115814856 - MGP_NODShiLtJ_P0085131 Olfr612 protein_coding protein_coding MGP_NODShiLtJ_T0015579.1 MGP_NODShiLtJ_G0013687.1 mouse_genomes_project 7 11945210 11953270 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087252.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157798134 157804817 + MGP_NODShiLtJ_P0087252 Cracr2b protein_coding protein_coding MGP_NODShiLtJ_T0087253.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157798935 157803236 + MGP_NODShiLtJ_P0087253 Cracr2b protein_coding protein_coding MGP_NODShiLtJ_T0087254.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157799000 157801669 + MGP_NODShiLtJ_P0087254 Cracr2b protein_coding protein_coding MGP_NODShiLtJ_T0087255.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157801317 157802936 + MGP_NODShiLtJ_P0087255 Cracr2b protein_coding protein_coding MGP_NODShiLtJ_T0087256.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157801617 157804276 + MGP_NODShiLtJ_P0087256 Cracr2b protein_coding protein_coding MGP_NODShiLtJ_T0087257.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157802250 157803039 + Cracr2b protein_coding retained_intron MGP_NODShiLtJ_T0087258.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157803300 157803881 + Cracr2b protein_coding retained_intron MGP_NODShiLtJ_T0087259.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157803434 157804562 + Cracr2b protein_coding retained_intron MGP_NODShiLtJ_T0087260.1 MGP_NODShiLtJ_G0033040.1 mouse_genomes_project 7 157803877 157804817 + MGP_NODShiLtJ_P0087260 Cracr2b protein_coding protein_coding MGP_NODShiLtJ_T0015619.1 MGP_NODShiLtJ_G0013727.1 mouse_genomes_project 7 26256286 26257591 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100768.1 MGP_NODShiLtJ_G0039162.1 mouse_genomes_project 7 119563637 119563773 + Gm22372 snoRNA snoRNA MGP_NODShiLtJ_T0101390.1 MGP_NODShiLtJ_G0039601.1 mouse_genomes_project 7 30124920 30148000 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101391.1 MGP_NODShiLtJ_G0039601.1 mouse_genomes_project 7 30126856 30141498 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0099492.1 MGP_NODShiLtJ_G0037886.1 mouse_genomes_project 7 69957121 69957222 + Gm22228 snRNA snRNA MGP_NODShiLtJ_T0015667.1 MGP_NODShiLtJ_G0013775.1 mouse_genomes_project 7 43590909 43592757 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015792.1 MGP_NODShiLtJ_G0013900.1 mouse_genomes_project 7 140605635 140606969 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081733.1 MGP_NODShiLtJ_G0031619.1 mouse_genomes_project 7 23277812 23325895 + MGP_NODShiLtJ_P0081733 Vmn1r172 protein_coding protein_coding MGP_NODShiLtJ_T0083689.1 MGP_NODShiLtJ_G0032106.1 mouse_genomes_project 7 52141640 52143423 + MGP_NODShiLtJ_P0083689 Mrgprb8 protein_coding protein_coding MGP_NODShiLtJ_T0085088.1 MGP_NODShiLtJ_G0032432.1 mouse_genomes_project 7 114863862 114864919 + MGP_NODShiLtJ_P0085088 Olfr557 protein_coding protein_coding MGP_NODShiLtJ_T0102108.1 MGP_NODShiLtJ_G0040274.1 mouse_genomes_project 7 26000840 26026444 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005198.1 MGP_NODShiLtJ_G0004411.1 mouse_genomes_project 7 108201126 108236440 - Gm15414 antisense antisense MGP_NODShiLtJ_T0085762.1 MGP_NODShiLtJ_G0032715.1 mouse_genomes_project 7 133494454 133517609 - MGP_NODShiLtJ_P0085762 Gprc5b protein_coding protein_coding MGP_NODShiLtJ_T0081242.1 MGP_NODShiLtJ_G0031463.1 mouse_genomes_project 7 11152673 11156324 + MGP_NODShiLtJ_P0081242 Rnf225 protein_coding protein_coding MGP_NODShiLtJ_T0084656.1 MGP_NODShiLtJ_G0032331.1 mouse_genomes_project 7 109043066 109050964 + MGP_NODShiLtJ_P0084656 Ndufc2 protein_coding protein_coding MGP_NODShiLtJ_T0084657.1 MGP_NODShiLtJ_G0032331.1 mouse_genomes_project 7 109043166 109050242 + MGP_NODShiLtJ_P0084657 Ndufc2 protein_coding protein_coding MGP_NODShiLtJ_T0102141.1 MGP_NODShiLtJ_G0040307.1 mouse_genomes_project 7 46813105 46815446 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015559.1 MGP_NODShiLtJ_G0013667.1 mouse_genomes_project 7 1429956 1430134 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008970.1 MGP_NODShiLtJ_G0007213.1 mouse_genomes_project 7 150247306 150329478 - Gm4593 lincRNA lincRNA MGP_NODShiLtJ_T0008971.1 MGP_NODShiLtJ_G0007213.1 mouse_genomes_project 7 150328684 150331729 - Gm4593 lincRNA lincRNA MGP_NODShiLtJ_T0085014.1 MGP_NODShiLtJ_G0032406.1 mouse_genomes_project 7 114099062 114148309 - MGP_NODShiLtJ_P0085014 Rnf121 protein_coding protein_coding MGP_NODShiLtJ_T0085015.1 MGP_NODShiLtJ_G0032406.1 mouse_genomes_project 7 114099077 114148620 - MGP_NODShiLtJ_P0085015 Rnf121 protein_coding protein_coding MGP_NODShiLtJ_T0085016.1 MGP_NODShiLtJ_G0032406.1 mouse_genomes_project 7 114100057 114143294 - MGP_NODShiLtJ_P0085016 Rnf121 protein_coding protein_coding MGP_NODShiLtJ_T0085017.1 MGP_NODShiLtJ_G0032406.1 mouse_genomes_project 7 114100358 114104652 - Rnf121 protein_coding retained_intron MGP_NODShiLtJ_T0085018.1 MGP_NODShiLtJ_G0032406.1 mouse_genomes_project 7 114109846 114148268 - MGP_NODShiLtJ_P0085018 Rnf121 protein_coding protein_coding MGP_NODShiLtJ_T0085019.1 MGP_NODShiLtJ_G0032406.1 mouse_genomes_project 7 114116346 114148309 - Rnf121 protein_coding processed_transcript MGP_NODShiLtJ_T0085020.1 MGP_NODShiLtJ_G0032406.1 mouse_genomes_project 7 114120607 114148061 - MGP_NODShiLtJ_P0085020 Rnf121 protein_coding protein_coding MGP_NODShiLtJ_T0082698.1 MGP_NODShiLtJ_G0031861.1 mouse_genomes_project 7 31570619 31572464 - MGP_NODShiLtJ_P0082698 Ffar3 protein_coding protein_coding MGP_NODShiLtJ_T0082699.1 MGP_NODShiLtJ_G0031861.1 mouse_genomes_project 7 31571219 31572453 - MGP_NODShiLtJ_P0082699 Ffar3 protein_coding protein_coding MGP_NODShiLtJ_T0082300.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29245136 29267987 + Sirt2 protein_coding processed_transcript MGP_NODShiLtJ_T0082301.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29245153 29267992 + MGP_NODShiLtJ_P0082301 Sirt2 protein_coding protein_coding MGP_NODShiLtJ_T0082302.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29245168 29267987 + MGP_NODShiLtJ_P0082302 Sirt2 protein_coding protein_coding MGP_NODShiLtJ_T0082303.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29245655 29267987 + Sirt2 protein_coding processed_transcript MGP_NODShiLtJ_T0082304.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29255227 29256058 + Sirt2 protein_coding retained_intron MGP_NODShiLtJ_T0082305.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29255377 29262666 + Sirt2 protein_coding retained_intron MGP_NODShiLtJ_T0082306.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29263952 29267094 + Sirt2 protein_coding processed_transcript MGP_NODShiLtJ_T0082307.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29264709 29266953 + Sirt2 protein_coding retained_intron MGP_NODShiLtJ_T0082308.1 MGP_NODShiLtJ_G0031775.1 mouse_genomes_project 7 29264883 29267587 + Sirt2 protein_coding retained_intron MGP_NODShiLtJ_T0086315.1 MGP_NODShiLtJ_G0032825.1 mouse_genomes_project 7 142194440 142198837 - MGP_NODShiLtJ_P0086315 Maz protein_coding protein_coding MGP_NODShiLtJ_T0086316.1 MGP_NODShiLtJ_G0032825.1 mouse_genomes_project 7 142194444 142198763 - MGP_NODShiLtJ_P0086316 Maz protein_coding protein_coding MGP_NODShiLtJ_T0086317.1 MGP_NODShiLtJ_G0032825.1 mouse_genomes_project 7 142194445 142198625 - MGP_NODShiLtJ_P0086317 Maz protein_coding protein_coding MGP_NODShiLtJ_T0086318.1 MGP_NODShiLtJ_G0032825.1 mouse_genomes_project 7 142195200 142198883 - MGP_NODShiLtJ_P0086318 Maz protein_coding protein_coding MGP_NODShiLtJ_T0086319.1 MGP_NODShiLtJ_G0032825.1 mouse_genomes_project 7 142195360 142197443 - Maz protein_coding retained_intron MGP_NODShiLtJ_T0102133.1 MGP_NODShiLtJ_G0040299.1 mouse_genomes_project 7 46697606 46697823 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085418.1 MGP_NODShiLtJ_G0032638.1 mouse_genomes_project 7 122417192 122418125 - MGP_NODShiLtJ_P0085418 Olfr514 protein_coding protein_coding MGP_NODShiLtJ_T0081305.1 MGP_NODShiLtJ_G0031479.1 mouse_genomes_project 7 11588463 11649701 + MGP_NODShiLtJ_P0081305 Pla2g4c protein_coding protein_coding MGP_NODShiLtJ_T0081306.1 MGP_NODShiLtJ_G0031479.1 mouse_genomes_project 7 11589471 11651011 + MGP_NODShiLtJ_P0081306 Pla2g4c protein_coding protein_coding MGP_NODShiLtJ_T0081307.1 MGP_NODShiLtJ_G0031479.1 mouse_genomes_project 7 11600539 11601720 + Pla2g4c protein_coding processed_transcript MGP_NODShiLtJ_T0081308.1 MGP_NODShiLtJ_G0031479.1 mouse_genomes_project 7 11601027 11651015 + MGP_NODShiLtJ_P0081308 Pla2g4c protein_coding protein_coding MGP_NODShiLtJ_T0015590.1 MGP_NODShiLtJ_G0013698.1 mouse_genomes_project 7 15504140 15504255 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081640.1 MGP_NODShiLtJ_G0031586.1 mouse_genomes_project 7 18817073 18851324 - MGP_NODShiLtJ_P0081640 Mark4 protein_coding protein_coding MGP_NODShiLtJ_T0081641.1 MGP_NODShiLtJ_G0031586.1 mouse_genomes_project 7 18817345 18851324 - MGP_NODShiLtJ_P0081641 Mark4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082336.1 MGP_NODShiLtJ_G0031780.1 mouse_genomes_project 7 29366380 29368224 + MGP_NODShiLtJ_P0082336 Lgals7 protein_coding protein_coding MGP_NODShiLtJ_T0082337.1 MGP_NODShiLtJ_G0031780.1 mouse_genomes_project 7 29366756 29368812 + MGP_NODShiLtJ_P0082337 Lgals7 protein_coding protein_coding MGP_NODShiLtJ_T0082338.1 MGP_NODShiLtJ_G0031780.1 mouse_genomes_project 7 29366982 29367516 + Lgals7 protein_coding processed_transcript MGP_NODShiLtJ_T0086544.1 MGP_NODShiLtJ_G0032872.1 mouse_genomes_project 7 143185089 143188739 + Kat8 protein_coding retained_intron MGP_NODShiLtJ_T0086545.1 MGP_NODShiLtJ_G0032872.1 mouse_genomes_project 7 143185089 143199453 + MGP_NODShiLtJ_P0086545 Kat8 protein_coding protein_coding MGP_NODShiLtJ_T0086546.1 MGP_NODShiLtJ_G0032872.1 mouse_genomes_project 7 143186803 143194127 + MGP_NODShiLtJ_P0086546 Kat8 protein_coding protein_coding MGP_NODShiLtJ_T0086547.1 MGP_NODShiLtJ_G0032872.1 mouse_genomes_project 7 143193403 143194195 + Kat8 protein_coding retained_intron MGP_NODShiLtJ_T0081639.1 MGP_NODShiLtJ_G0031585.1 mouse_genomes_project 7 18809790 18812369 - MGP_NODShiLtJ_P0081639 protein_coding protein_coding MGP_NODShiLtJ_T0084436.1 MGP_NODShiLtJ_G0032256.1 mouse_genomes_project 7 90311346 90337004 - MGP_NODShiLtJ_P0084436 Bnc1 protein_coding protein_coding MGP_NODShiLtJ_T0102144.1 MGP_NODShiLtJ_G0040310.1 mouse_genomes_project 7 50408144 50409062 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015661.1 MGP_NODShiLtJ_G0013769.1 mouse_genomes_project 7 43212625 43214124 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081058.1 MGP_NODShiLtJ_G0031372.1 mouse_genomes_project 7 1918825 1920230 + MGP_NODShiLtJ_P0081058 Tmem190 protein_coding protein_coding MGP_NODShiLtJ_T0081059.1 MGP_NODShiLtJ_G0031372.1 mouse_genomes_project 7 1918839 1919247 + Tmem190 protein_coding retained_intron MGP_NODShiLtJ_T0087433.1 MGP_NODShiLtJ_G0033076.1 mouse_genomes_project 7 159568888 159570733 + MGP_NODShiLtJ_P0087433 Tssc4 protein_coding protein_coding MGP_NODShiLtJ_T0087434.1 MGP_NODShiLtJ_G0033076.1 mouse_genomes_project 7 159568980 159570186 + MGP_NODShiLtJ_P0087434 Tssc4 protein_coding protein_coding MGP_NODShiLtJ_T0087435.1 MGP_NODShiLtJ_G0033076.1 mouse_genomes_project 7 159569007 159570727 + MGP_NODShiLtJ_P0087435 Tssc4 protein_coding protein_coding MGP_NODShiLtJ_T0087436.1 MGP_NODShiLtJ_G0033076.1 mouse_genomes_project 7 159569007 159570727 + MGP_NODShiLtJ_P0087436 Tssc4 protein_coding protein_coding MGP_NODShiLtJ_T0087437.1 MGP_NODShiLtJ_G0033076.1 mouse_genomes_project 7 159569063 159570185 + MGP_NODShiLtJ_P0087437 Tssc4 protein_coding protein_coding MGP_NODShiLtJ_T0087438.1 MGP_NODShiLtJ_G0033076.1 mouse_genomes_project 7 159569183 159570249 + MGP_NODShiLtJ_P0087438 Tssc4 protein_coding protein_coding MGP_NODShiLtJ_T0086599.1 MGP_NODShiLtJ_G0032884.1 mouse_genomes_project 7 143553006 143553761 + Armc5 protein_coding processed_transcript MGP_NODShiLtJ_T0086600.1 MGP_NODShiLtJ_G0032884.1 mouse_genomes_project 7 143553021 143562197 + MGP_NODShiLtJ_P0086600 Armc5 protein_coding protein_coding MGP_NODShiLtJ_T0084425.1 MGP_NODShiLtJ_G0032254.1 mouse_genomes_project 7 90198898 90223540 + MGP_NODShiLtJ_P0084425 Tm6sf1 protein_coding protein_coding MGP_NODShiLtJ_T0084426.1 MGP_NODShiLtJ_G0032254.1 mouse_genomes_project 7 90198917 90213778 + Tm6sf1 protein_coding retained_intron MGP_NODShiLtJ_T0084427.1 MGP_NODShiLtJ_G0032254.1 mouse_genomes_project 7 90199015 90205300 + Tm6sf1 protein_coding processed_transcript MGP_NODShiLtJ_T0084428.1 MGP_NODShiLtJ_G0032254.1 mouse_genomes_project 7 90199048 90223903 + MGP_NODShiLtJ_P0084428 Tm6sf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084429.1 MGP_NODShiLtJ_G0032254.1 mouse_genomes_project 7 90199346 90217826 + MGP_NODShiLtJ_P0084429 Tm6sf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084430.1 MGP_NODShiLtJ_G0032254.1 mouse_genomes_project 7 90202590 90222884 + MGP_NODShiLtJ_P0084430 Tm6sf1 protein_coding protein_coding MGP_NODShiLtJ_T0084431.1 MGP_NODShiLtJ_G0032254.1 mouse_genomes_project 7 90209633 90212316 + Tm6sf1 protein_coding retained_intron MGP_NODShiLtJ_T0084432.1 MGP_NODShiLtJ_G0032254.1 mouse_genomes_project 7 90213393 90222872 + Tm6sf1 protein_coding retained_intron MGP_NODShiLtJ_T0081103.1 MGP_NODShiLtJ_G0031392.1 mouse_genomes_project 7 2253189 2257527 + MGP_NODShiLtJ_P0081103 protein_coding protein_coding MGP_NODShiLtJ_T0099513.1 MGP_NODShiLtJ_G0037907.1 mouse_genomes_project 7 123690852 123690993 + Gm23100 snRNA snRNA MGP_NODShiLtJ_T0008803.1 MGP_NODShiLtJ_G0007104.1 mouse_genomes_project 7 71691345 71691901 - Gm45214 lincRNA lincRNA MGP_NODShiLtJ_T0008804.1 MGP_NODShiLtJ_G0007104.1 mouse_genomes_project 7 71691348 71691961 - Gm45214 lincRNA lincRNA MGP_NODShiLtJ_T0015618.1 MGP_NODShiLtJ_G0013726.1 mouse_genomes_project 7 26116992 26117746 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087189.1 MGP_NODShiLtJ_G0033033.1 mouse_genomes_project 7 157725232 157736746 + MGP_NODShiLtJ_P0087189 Taldo1 protein_coding protein_coding MGP_NODShiLtJ_T0087190.1 MGP_NODShiLtJ_G0033033.1 mouse_genomes_project 7 157725276 157732909 + Taldo1 protein_coding retained_intron MGP_NODShiLtJ_T0087191.1 MGP_NODShiLtJ_G0033033.1 mouse_genomes_project 7 157733931 157735984 + Taldo1 protein_coding retained_intron MGP_NODShiLtJ_T0082589.1 MGP_NODShiLtJ_G0031841.1 mouse_genomes_project 7 31213410 31217616 - MGP_NODShiLtJ_P0082589 Lin37 protein_coding protein_coding MGP_NODShiLtJ_T0082590.1 MGP_NODShiLtJ_G0031841.1 mouse_genomes_project 7 31213413 31213991 - Lin37 protein_coding retained_intron MGP_NODShiLtJ_T0082591.1 MGP_NODShiLtJ_G0031841.1 mouse_genomes_project 7 31213414 31217808 - MGP_NODShiLtJ_P0082591 Lin37 protein_coding protein_coding MGP_NODShiLtJ_T0082592.1 MGP_NODShiLtJ_G0031841.1 mouse_genomes_project 7 31213829 31217629 - MGP_NODShiLtJ_P0082592 Lin37 protein_coding protein_coding MGP_NODShiLtJ_T0082593.1 MGP_NODShiLtJ_G0031841.1 mouse_genomes_project 7 31215062 31217609 - Lin37 protein_coding processed_transcript MGP_NODShiLtJ_T0080944.1 MGP_NODShiLtJ_G0031351.1 mouse_genomes_project 7 1179571 1195412 - MGP_NODShiLtJ_P0080944 1700027J19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080945.1 MGP_NODShiLtJ_G0031351.1 mouse_genomes_project 7 1179862 1195091 - MGP_NODShiLtJ_P0080945 1700027J19Rik protein_coding protein_coding MGP_NODShiLtJ_T0080946.1 MGP_NODShiLtJ_G0031351.1 mouse_genomes_project 7 1180087 1194994 - MGP_NODShiLtJ_P0080946 1700027J19Rik protein_coding protein_coding MGP_NODShiLtJ_T0008723.1 MGP_NODShiLtJ_G0007039.1 mouse_genomes_project 7 990306 992034 + 1700095K22Rik lincRNA lincRNA MGP_NODShiLtJ_T0083096.1 MGP_NODShiLtJ_G0031948.1 mouse_genomes_project 7 46067129 46077119 + MGP_NODShiLtJ_P0083096 Vsig10l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083097.1 MGP_NODShiLtJ_G0031948.1 mouse_genomes_project 7 46068329 46076141 + MGP_NODShiLtJ_P0083097 Vsig10l protein_coding protein_coding MGP_NODShiLtJ_T0083098.1 MGP_NODShiLtJ_G0031948.1 mouse_genomes_project 7 46069773 46070430 + Vsig10l protein_coding retained_intron MGP_NODShiLtJ_T0083099.1 MGP_NODShiLtJ_G0031948.1 mouse_genomes_project 7 46070810 46072775 + Vsig10l protein_coding processed_transcript MGP_NODShiLtJ_T0083100.1 MGP_NODShiLtJ_G0031948.1 mouse_genomes_project 7 46072711 46076096 + MGP_NODShiLtJ_P0083100 Vsig10l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0102208.1 MGP_NODShiLtJ_G0040374.1 mouse_genomes_project 7 117379277 117380243 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008832.1 MGP_NODShiLtJ_G0007126.1 mouse_genomes_project 7 80470752 80472862 + 4933435G04Rik lincRNA lincRNA MGP_NODShiLtJ_T0015647.1 MGP_NODShiLtJ_G0013755.1 mouse_genomes_project 7 34952432 34953019 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010721.1 MGP_NODShiLtJ_G0008854.1 mouse_genomes_project 7 132698 132777 + Mir291b miRNA miRNA MGP_NODShiLtJ_T0087432.1 MGP_NODShiLtJ_G0033075.1 mouse_genomes_project 7 159568792 159574201 - MGP_NODShiLtJ_P0087432 Trpm5 protein_coding protein_coding MGP_NODShiLtJ_T0087439.1 MGP_NODShiLtJ_G0033075.1 mouse_genomes_project 7 159570730 159573677 - MGP_NODShiLtJ_P0087439 Trpm5 protein_coding protein_coding MGP_NODShiLtJ_T0087440.1 MGP_NODShiLtJ_G0033075.1 mouse_genomes_project 7 159570856 159574493 - Trpm5 protein_coding retained_intron MGP_NODShiLtJ_T0087441.1 MGP_NODShiLtJ_G0033075.1 mouse_genomes_project 7 159571168 159586854 - Trpm5 protein_coding retained_intron MGP_NODShiLtJ_T0087442.1 MGP_NODShiLtJ_G0033075.1 mouse_genomes_project 7 159571428 159594282 - MGP_NODShiLtJ_P0087442 Trpm5 protein_coding protein_coding MGP_NODShiLtJ_T0087443.1 MGP_NODShiLtJ_G0033075.1 mouse_genomes_project 7 159571817 159586769 - Trpm5 protein_coding retained_intron MGP_NODShiLtJ_T0087444.1 MGP_NODShiLtJ_G0033075.1 mouse_genomes_project 7 159571981 159594246 - MGP_NODShiLtJ_P0087444 Trpm5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087445.1 MGP_NODShiLtJ_G0033075.1 mouse_genomes_project 7 159580355 159581562 - Trpm5 protein_coding retained_intron MGP_NODShiLtJ_T0085904.1 MGP_NODShiLtJ_G0032758.1 mouse_genomes_project 7 136910792 136914252 - Ndufab1 protein_coding retained_intron MGP_NODShiLtJ_T0085905.1 MGP_NODShiLtJ_G0032758.1 mouse_genomes_project 7 136913282 136915557 - Ndufab1 protein_coding retained_intron MGP_NODShiLtJ_T0085906.1 MGP_NODShiLtJ_G0032758.1 mouse_genomes_project 7 136913297 136916212 - Ndufab1 protein_coding retained_intron MGP_NODShiLtJ_T0085907.1 MGP_NODShiLtJ_G0032758.1 mouse_genomes_project 7 136913990 136924804 - MGP_NODShiLtJ_P0085907 Ndufab1 protein_coding protein_coding MGP_NODShiLtJ_T0085908.1 MGP_NODShiLtJ_G0032758.1 mouse_genomes_project 7 136914058 136924933 - MGP_NODShiLtJ_P0085908 Ndufab1 protein_coding protein_coding MGP_NODShiLtJ_T0085909.1 MGP_NODShiLtJ_G0032758.1 mouse_genomes_project 7 136915589 136924775 - Ndufab1 protein_coding retained_intron MGP_NODShiLtJ_T0085910.1 MGP_NODShiLtJ_G0032758.1 mouse_genomes_project 7 136916461 136923777 - Ndufab1 protein_coding processed_transcript MGP_NODShiLtJ_T0085911.1 MGP_NODShiLtJ_G0032758.1 mouse_genomes_project 7 136918892 136924897 - Ndufab1 protein_coding retained_intron MGP_NODShiLtJ_T0085114.1 MGP_NODShiLtJ_G0032456.1 mouse_genomes_project 7 115404599 115407979 + MGP_NODShiLtJ_P0085114 Olfr592 protein_coding protein_coding MGP_NODShiLtJ_T0085115.1 MGP_NODShiLtJ_G0032456.1 mouse_genomes_project 7 115407040 115407979 + MGP_NODShiLtJ_P0085115 Olfr592 protein_coding protein_coding MGP_NODShiLtJ_T0018182.1 MGP_NODShiLtJ_G0015526.1 mouse_genomes_project 7 30135943 30139948 - A330087D11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0085806.1 MGP_NODShiLtJ_G0032728.1 mouse_genomes_project 7 134444100 134487436 - MGP_NODShiLtJ_P0085806 Dcun1d3 protein_coding protein_coding MGP_NODShiLtJ_T0085807.1 MGP_NODShiLtJ_G0032728.1 mouse_genomes_project 7 134446750 134487234 - MGP_NODShiLtJ_P0085807 Dcun1d3 protein_coding protein_coding MGP_NODShiLtJ_T0085808.1 MGP_NODShiLtJ_G0032728.1 mouse_genomes_project 7 134448262 134487982 - MGP_NODShiLtJ_P0085808 Dcun1d3 protein_coding protein_coding MGP_NODShiLtJ_T0085809.1 MGP_NODShiLtJ_G0032728.1 mouse_genomes_project 7 134448930 134452775 - MGP_NODShiLtJ_P0085809 Dcun1d3 protein_coding protein_coding MGP_NODShiLtJ_T0085810.1 MGP_NODShiLtJ_G0032728.1 mouse_genomes_project 7 134450563 134452747 - MGP_NODShiLtJ_P0085810 Dcun1d3 protein_coding protein_coding MGP_NODShiLtJ_T0002212.1 MGP_NODShiLtJ_G0002123.1 mouse_genomes_project 7 81351763 81353963 - TEC TEC MGP_NODShiLtJ_T0082934.1 MGP_NODShiLtJ_G0031906.1 mouse_genomes_project 7 36714711 36731926 + MGP_NODShiLtJ_P0082934 Slc7a9 protein_coding protein_coding MGP_NODShiLtJ_T0082935.1 MGP_NODShiLtJ_G0031906.1 mouse_genomes_project 7 36714955 36731926 + MGP_NODShiLtJ_P0082935 Slc7a9 protein_coding protein_coding MGP_NODShiLtJ_T0082936.1 MGP_NODShiLtJ_G0031906.1 mouse_genomes_project 7 36715016 36715989 + Slc7a9 protein_coding retained_intron MGP_NODShiLtJ_T0082937.1 MGP_NODShiLtJ_G0031906.1 mouse_genomes_project 7 36715018 36731893 + Slc7a9 protein_coding retained_intron MGP_NODShiLtJ_T0082938.1 MGP_NODShiLtJ_G0031906.1 mouse_genomes_project 7 36715088 36731926 + MGP_NODShiLtJ_P0082938 Slc7a9 protein_coding protein_coding MGP_NODShiLtJ_T0082939.1 MGP_NODShiLtJ_G0031906.1 mouse_genomes_project 7 36715754 36721525 + MGP_NODShiLtJ_P0082939 Slc7a9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083608.1 MGP_NODShiLtJ_G0032079.1 mouse_genomes_project 7 49148863 49222579 + MGP_NODShiLtJ_P0083608 Otog protein_coding protein_coding MGP_NODShiLtJ_T0083695.1 MGP_NODShiLtJ_G0032109.1 mouse_genomes_project 7 52305277 52317387 - MGP_NODShiLtJ_P0083695 Mrgprb2 protein_coding protein_coding MGP_NODShiLtJ_T0100735.1 MGP_NODShiLtJ_G0039129.1 mouse_genomes_project 7 46929291 46929384 + Gm23991 snoRNA snoRNA MGP_NODShiLtJ_T0002255.1 MGP_NODShiLtJ_G0002166.1 mouse_genomes_project 7 140102594 140105057 - TEC TEC MGP_NODShiLtJ_T0087525.1 MGP_NODShiLtJ_G0033096.1 mouse_genomes_project 7 161200788 161355845 - MGP_NODShiLtJ_P0087525 Ano1 protein_coding protein_coding MGP_NODShiLtJ_T0087526.1 MGP_NODShiLtJ_G0033096.1 mouse_genomes_project 7 161200788 161355868 - MGP_NODShiLtJ_P0087526 Ano1 protein_coding protein_coding MGP_NODShiLtJ_T0087527.1 MGP_NODShiLtJ_G0033096.1 mouse_genomes_project 7 161200792 161355894 - MGP_NODShiLtJ_P0087527 Ano1 protein_coding protein_coding MGP_NODShiLtJ_T0087528.1 MGP_NODShiLtJ_G0033096.1 mouse_genomes_project 7 161207679 161220537 - Ano1 protein_coding retained_intron MGP_NODShiLtJ_T0087529.1 MGP_NODShiLtJ_G0033096.1 mouse_genomes_project 7 161234987 161283623 - MGP_NODShiLtJ_P0087529 Ano1 protein_coding protein_coding MGP_NODShiLtJ_T0087530.1 MGP_NODShiLtJ_G0033096.1 mouse_genomes_project 7 161264772 161369266 - MGP_NODShiLtJ_P0087530 Ano1 protein_coding protein_coding MGP_NODShiLtJ_T0087531.1 MGP_NODShiLtJ_G0033096.1 mouse_genomes_project 7 161268364 161283620 - Ano1 protein_coding retained_intron MGP_NODShiLtJ_T0087532.1 MGP_NODShiLtJ_G0033096.1 mouse_genomes_project 7 161269870 161293108 - MGP_NODShiLtJ_P0087532 Ano1 protein_coding protein_coding MGP_NODShiLtJ_T0008797.1 MGP_NODShiLtJ_G0007099.1 mouse_genomes_project 7 69689102 69796840 - 4930554H23Rik lincRNA lincRNA MGP_NODShiLtJ_T0083705.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 52680022 52745465 + Nav2 protein_coding processed_transcript MGP_NODShiLtJ_T0083706.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 52740727 52754235 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0083707.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 52740751 53457465 + MGP_NODShiLtJ_P0083707 Nav2 protein_coding protein_coding MGP_NODShiLtJ_T0083708.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53067195 53242861 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0083709.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53067195 53460739 + MGP_NODShiLtJ_P0083709 Nav2 protein_coding protein_coding MGP_NODShiLtJ_T0083710.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53067850 53460742 + MGP_NODShiLtJ_P0083710 Nav2 protein_coding protein_coding MGP_NODShiLtJ_T0083711.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53067851 53335000 + MGP_NODShiLtJ_P0083711 Nav2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083712.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53067974 53460743 + MGP_NODShiLtJ_P0083712 Nav2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083713.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53124936 53244624 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0083714.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53125050 53276082 + Nav2 protein_coding processed_transcript MGP_NODShiLtJ_T0083715.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53125052 53126716 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0083716.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53197987 53292894 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0083717.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53289012 53303160 + Nav2 protein_coding processed_transcript MGP_NODShiLtJ_T0083718.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53397666 53406369 + MGP_NODShiLtJ_P0083718 Nav2 protein_coding protein_coding MGP_NODShiLtJ_T0083719.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53403280 53406111 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0083720.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53424322 53425788 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0083721.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53434442 53437492 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0083722.1 MGP_NODShiLtJ_G0032114.1 mouse_genomes_project 7 53438028 53440591 + Nav2 protein_coding retained_intron MGP_NODShiLtJ_T0015592.1 MGP_NODShiLtJ_G0013700.1 mouse_genomes_project 7 15588568 15590671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102120.1 MGP_NODShiLtJ_G0040286.1 mouse_genomes_project 7 34862322 34863160 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084769.1 MGP_NODShiLtJ_G0032353.1 mouse_genomes_project 7 110946383 110976902 - MGP_NODShiLtJ_P0084769 Dgat2 protein_coding protein_coding MGP_NODShiLtJ_T0002158.1 MGP_NODShiLtJ_G0002070.1 mouse_genomes_project 7 35504599 35507408 - TEC TEC MGP_NODShiLtJ_T0081838.1 MGP_NODShiLtJ_G0031654.1 mouse_genomes_project 7 24463367 24468995 + MGP_NODShiLtJ_P0081838 BC049730 protein_coding protein_coding MGP_NODShiLtJ_T0081839.1 MGP_NODShiLtJ_G0031654.1 mouse_genomes_project 7 24463384 24469935 + MGP_NODShiLtJ_P0081839 BC049730 protein_coding protein_coding MGP_NODShiLtJ_T0005211.1 MGP_NODShiLtJ_G0004419.1 mouse_genomes_project 7 124387238 124400354 - Gm28863 antisense antisense MGP_NODShiLtJ_T0085407.1 MGP_NODShiLtJ_G0032627.1 mouse_genomes_project 7 121937090 121938035 + MGP_NODShiLtJ_P0085407 Olfr497 protein_coding protein_coding MGP_NODShiLtJ_T0102107.1 MGP_NODShiLtJ_G0040273.1 mouse_genomes_project 7 25968862 25975763 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085750.1 MGP_NODShiLtJ_G0032713.1 mouse_genomes_project 7 133350325 133364102 - MGP_NODShiLtJ_P0085750 Knop1 protein_coding protein_coding MGP_NODShiLtJ_T0085751.1 MGP_NODShiLtJ_G0032713.1 mouse_genomes_project 7 133350325 133364102 - MGP_NODShiLtJ_P0085751 Knop1 protein_coding protein_coding MGP_NODShiLtJ_T0085752.1 MGP_NODShiLtJ_G0032713.1 mouse_genomes_project 7 133350340 133364105 - MGP_NODShiLtJ_P0085752 Knop1 protein_coding protein_coding MGP_NODShiLtJ_T0085753.1 MGP_NODShiLtJ_G0032713.1 mouse_genomes_project 7 133351893 133363788 - MGP_NODShiLtJ_P0085753 Knop1 protein_coding protein_coding MGP_NODShiLtJ_T0085754.1 MGP_NODShiLtJ_G0032713.1 mouse_genomes_project 7 133353604 133363706 - MGP_NODShiLtJ_P0085754 Knop1 protein_coding protein_coding MGP_NODShiLtJ_T0085755.1 MGP_NODShiLtJ_G0032713.1 mouse_genomes_project 7 133353863 133364358 - MGP_NODShiLtJ_P0085755 Knop1 protein_coding protein_coding MGP_NODShiLtJ_T0085756.1 MGP_NODShiLtJ_G0032713.1 mouse_genomes_project 7 133360866 133362393 - MGP_NODShiLtJ_P0085756 Knop1 protein_coding protein_coding MGP_NODShiLtJ_T0008818.1 MGP_NODShiLtJ_G0007113.1 mouse_genomes_project 7 75074215 75088725 - Gm16158 lincRNA lincRNA MGP_NODShiLtJ_T0008819.1 MGP_NODShiLtJ_G0007113.1 mouse_genomes_project 7 75074215 75088744 - Gm16158 lincRNA lincRNA MGP_NODShiLtJ_T0102061.1 MGP_NODShiLtJ_G0040228.1 mouse_genomes_project 7 8363131 8384014 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083517.1 MGP_NODShiLtJ_G0032055.1 mouse_genomes_project 7 48524687 48541401 - MGP_NODShiLtJ_P0083517 Sec1 protein_coding protein_coding MGP_NODShiLtJ_T0082830.1 MGP_NODShiLtJ_G0031887.1 mouse_genomes_project 7 35006949 35190574 + MGP_NODShiLtJ_P0082830 protein_coding protein_coding MGP_NODShiLtJ_T0084413.1 MGP_NODShiLtJ_G0032249.1 mouse_genomes_project 7 89876148 89907719 + MGP_NODShiLtJ_P0084413 Whamm protein_coding protein_coding MGP_NODShiLtJ_T0084414.1 MGP_NODShiLtJ_G0032249.1 mouse_genomes_project 7 89876178 89903536 + MGP_NODShiLtJ_P0084414 Whamm protein_coding unknown_likely_coding MGP_NODShiLtJ_T0005126.1 MGP_NODShiLtJ_G0004360.1 mouse_genomes_project 7 30126706 30129157 - Gm29326 antisense antisense MGP_NODShiLtJ_T0085206.1 MGP_NODShiLtJ_G0032523.1 mouse_genomes_project 7 117198432 117199478 + MGP_NODShiLtJ_P0085206 Olfr653 protein_coding protein_coding MGP_NODShiLtJ_T0083686.1 MGP_NODShiLtJ_G0032103.1 mouse_genomes_project 7 51740038 51749792 - MGP_NODShiLtJ_P0083686 Mrgprx1 protein_coding protein_coding MGP_NODShiLtJ_T0015724.1 MGP_NODShiLtJ_G0013832.1 mouse_genomes_project 7 82374040 82374840 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082215.1 MGP_NODShiLtJ_G0031748.1 mouse_genomes_project 7 28574573 28582614 + MGP_NODShiLtJ_P0082215 Dyrk1b protein_coding protein_coding MGP_NODShiLtJ_T0082216.1 MGP_NODShiLtJ_G0031748.1 mouse_genomes_project 7 28574598 28582243 + MGP_NODShiLtJ_P0082216 Dyrk1b protein_coding protein_coding MGP_NODShiLtJ_T0082217.1 MGP_NODShiLtJ_G0031748.1 mouse_genomes_project 7 28575585 28582614 + MGP_NODShiLtJ_P0082217 Dyrk1b protein_coding protein_coding MGP_NODShiLtJ_T0082218.1 MGP_NODShiLtJ_G0031748.1 mouse_genomes_project 7 28575635 28582263 + MGP_NODShiLtJ_P0082218 Dyrk1b protein_coding protein_coding MGP_NODShiLtJ_T0005249.1 MGP_NODShiLtJ_G0004447.1 mouse_genomes_project 7 148349929 148352436 - Gm15582 antisense antisense MGP_NODShiLtJ_T0005151.1 MGP_NODShiLtJ_G0004380.1 mouse_genomes_project 7 42572122 42659104 - antisense antisense MGP_NODShiLtJ_T0005152.1 MGP_NODShiLtJ_G0004380.1 mouse_genomes_project 7 42604829 42655612 - antisense antisense MGP_NODShiLtJ_T0005153.1 MGP_NODShiLtJ_G0004380.1 mouse_genomes_project 7 42606940 42632645 - antisense antisense MGP_NODShiLtJ_T0005154.1 MGP_NODShiLtJ_G0004380.1 mouse_genomes_project 7 42632827 42655890 - antisense antisense MGP_NODShiLtJ_T0081515.1 MGP_NODShiLtJ_G0031554.1 mouse_genomes_project 7 18189948 18207965 + Pglyrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0081516.1 MGP_NODShiLtJ_G0031554.1 mouse_genomes_project 7 18189948 18209024 + Pglyrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0081517.1 MGP_NODShiLtJ_G0031554.1 mouse_genomes_project 7 18202606 18209006 + MGP_NODShiLtJ_P0081517 Pglyrp1 protein_coding protein_coding MGP_NODShiLtJ_T0081518.1 MGP_NODShiLtJ_G0031554.1 mouse_genomes_project 7 18202619 18203623 + Pglyrp1 protein_coding retained_intron MGP_NODShiLtJ_T0081590.1 MGP_NODShiLtJ_G0031574.1 mouse_genomes_project 7 18594007 18618546 + MGP_NODShiLtJ_P0081590 Opa3 protein_coding protein_coding MGP_NODShiLtJ_T0081591.1 MGP_NODShiLtJ_G0031574.1 mouse_genomes_project 7 18594056 18594783 + Opa3 protein_coding retained_intron MGP_NODShiLtJ_T0081592.1 MGP_NODShiLtJ_G0031574.1 mouse_genomes_project 7 18594056 18629945 + MGP_NODShiLtJ_P0081592 Opa3 protein_coding protein_coding MGP_NODShiLtJ_T0083904.1 MGP_NODShiLtJ_G0032157.1 mouse_genomes_project 7 71208869 71638670 - MGP_NODShiLtJ_P0083904 Fam189a1 protein_coding protein_coding MGP_NODShiLtJ_T0083905.1 MGP_NODShiLtJ_G0032157.1 mouse_genomes_project 7 71208891 71227308 - Fam189a1 protein_coding processed_transcript MGP_NODShiLtJ_T0083906.1 MGP_NODShiLtJ_G0032157.1 mouse_genomes_project 7 71220500 71387866 - MGP_NODShiLtJ_P0083906 Fam189a1 protein_coding protein_coding MGP_NODShiLtJ_T0083907.1 MGP_NODShiLtJ_G0032157.1 mouse_genomes_project 7 71240345 71638488 - MGP_NODShiLtJ_P0083907 Fam189a1 protein_coding protein_coding MGP_NODShiLtJ_T0083908.1 MGP_NODShiLtJ_G0032157.1 mouse_genomes_project 7 71279732 71314269 - Fam189a1 protein_coding retained_intron MGP_NODShiLtJ_T0018214.1 MGP_NODShiLtJ_G0015538.1 mouse_genomes_project 7 60982992 60994036 - Gm34121 processed_transcript lincRNA MGP_NODShiLtJ_T0018215.1 MGP_NODShiLtJ_G0015538.1 mouse_genomes_project 7 60990453 60994001 - Gm34121 processed_transcript retained_intron MGP_NODShiLtJ_T0008879.1 MGP_NODShiLtJ_G0007152.1 mouse_genomes_project 7 92699566 92747586 + Gm26708 lincRNA lincRNA MGP_NODShiLtJ_T0099483.1 MGP_NODShiLtJ_G0037877.1 mouse_genomes_project 7 42636992 42637073 + Gm25784 snRNA snRNA MGP_NODShiLtJ_T0008842.1 MGP_NODShiLtJ_G0007134.1 mouse_genomes_project 7 81180014 81214933 - Gm10619 lincRNA lincRNA MGP_NODShiLtJ_T0008843.1 MGP_NODShiLtJ_G0007134.1 mouse_genomes_project 7 81206723 81215005 - Gm10619 lincRNA lincRNA MGP_NODShiLtJ_T0015576.1 MGP_NODShiLtJ_G0013684.1 mouse_genomes_project 7 11783834 11784156 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100746.1 MGP_NODShiLtJ_G0039140.1 mouse_genomes_project 7 64803517 64811803 - snoRNA snoRNA MGP_NODShiLtJ_T0102114.1 MGP_NODShiLtJ_G0040280.1 mouse_genomes_project 7 34481382 34482766 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081644.1 MGP_NODShiLtJ_G0031588.1 mouse_genomes_project 7 18901406 18903920 - MGP_NODShiLtJ_P0081644 Bloc1s3 protein_coding protein_coding MGP_NODShiLtJ_T0015566.1 MGP_NODShiLtJ_G0013674.1 mouse_genomes_project 7 3187929 3188061 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011575.1 MGP_NODShiLtJ_G0009708.1 mouse_genomes_project 7 46918589 46918877 + Gm25386 misc_RNA misc_RNA MGP_NODShiLtJ_T0083141.1 MGP_NODShiLtJ_G0031964.1 mouse_genomes_project 7 46436006 46442230 + MGP_NODShiLtJ_P0083141 Klk8 protein_coding protein_coding MGP_NODShiLtJ_T0083142.1 MGP_NODShiLtJ_G0031964.1 mouse_genomes_project 7 46436025 46442079 + MGP_NODShiLtJ_P0083142 Klk8 protein_coding protein_coding MGP_NODShiLtJ_T0083143.1 MGP_NODShiLtJ_G0031964.1 mouse_genomes_project 7 46440273 46442234 + Klk8 protein_coding retained_intron MGP_NODShiLtJ_T0081508.1 MGP_NODShiLtJ_G0031551.1 mouse_genomes_project 7 18072404 18136309 - MGP_NODShiLtJ_P0081508 Psg19 protein_coding protein_coding MGP_NODShiLtJ_T0081509.1 MGP_NODShiLtJ_G0031551.1 mouse_genomes_project 7 18078426 18136309 - Psg19 protein_coding retained_intron MGP_NODShiLtJ_T0015669.1 MGP_NODShiLtJ_G0013777.1 mouse_genomes_project 7 43697044 43697751 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015805.1 MGP_NODShiLtJ_G0013913.1 mouse_genomes_project 7 143468807 143469707 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015598.1 MGP_NODShiLtJ_G0013706.1 mouse_genomes_project 7 17165346 17166045 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015688.1 MGP_NODShiLtJ_G0013796.1 mouse_genomes_project 7 46985325 46986298 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010769.1 MGP_NODShiLtJ_G0008902.1 mouse_genomes_project 7 62735472 62735574 + Mir6389 miRNA miRNA MGP_NODShiLtJ_T0086521.1 MGP_NODShiLtJ_G0032866.1 mouse_genomes_project 7 143131651 143148717 - MGP_NODShiLtJ_P0086521 Zfp668 protein_coding protein_coding MGP_NODShiLtJ_T0086522.1 MGP_NODShiLtJ_G0032866.1 mouse_genomes_project 7 143134316 143148669 - MGP_NODShiLtJ_P0086522 Zfp668 protein_coding protein_coding MGP_NODShiLtJ_T0086523.1 MGP_NODShiLtJ_G0032866.1 mouse_genomes_project 7 143134592 143147525 - MGP_NODShiLtJ_P0086523 Zfp668 protein_coding protein_coding MGP_NODShiLtJ_T0086524.1 MGP_NODShiLtJ_G0032866.1 mouse_genomes_project 7 143134592 143148666 - MGP_NODShiLtJ_P0086524 Zfp668 protein_coding protein_coding MGP_NODShiLtJ_T0086525.1 MGP_NODShiLtJ_G0032866.1 mouse_genomes_project 7 143136640 143147536 - MGP_NODShiLtJ_P0086525 Zfp668 protein_coding protein_coding MGP_NODShiLtJ_T0086526.1 MGP_NODShiLtJ_G0032866.1 mouse_genomes_project 7 143145656 143148013 - Zfp668 protein_coding processed_transcript MGP_NODShiLtJ_T0099517.1 MGP_NODShiLtJ_G0037911.1 mouse_genomes_project 7 134567722 134567823 + Gm25217 snRNA snRNA MGP_NODShiLtJ_T0085154.1 MGP_NODShiLtJ_G0032493.1 mouse_genomes_project 7 116376436 116377360 - MGP_NODShiLtJ_P0085154 Olfr64 protein_coding protein_coding MGP_NODShiLtJ_T0082036.1 MGP_NODShiLtJ_G0031699.1 mouse_genomes_project 7 26471442 26522710 + MGP_NODShiLtJ_P0082036 protein_coding protein_coding MGP_NODShiLtJ_T0082595.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222394 31224448 + U2af1l4 protein_coding processed_transcript MGP_NODShiLtJ_T0082596.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222400 31224219 + U2af1l4 protein_coding processed_transcript MGP_NODShiLtJ_T0082597.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222412 31223575 + MGP_NODShiLtJ_P0082597 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082598.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222414 31224459 + MGP_NODShiLtJ_P0082598 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0082599.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222418 31224456 + MGP_NODShiLtJ_P0082599 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0082600.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222419 31223701 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082601.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222419 31224445 + MGP_NODShiLtJ_P0082601 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0082602.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222422 31223705 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082603.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222423 31223702 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082604.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222429 31224254 + MGP_NODShiLtJ_P0082604 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082605.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222431 31223892 + MGP_NODShiLtJ_P0082605 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082606.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222432 31224258 + MGP_NODShiLtJ_P0082606 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082607.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222433 31223153 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082608.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222435 31224338 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082609.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222437 31227054 + MGP_NODShiLtJ_P0082609 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082610.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222437 31223832 + MGP_NODShiLtJ_P0082610 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082611.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222439 31223595 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082612.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222441 31224458 + MGP_NODShiLtJ_P0082612 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0082613.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222442 31223152 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082614.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222443 31224455 + U2af1l4 protein_coding processed_transcript MGP_NODShiLtJ_T0082615.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222443 31227056 + MGP_NODShiLtJ_P0082615 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082616.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222448 31227051 + MGP_NODShiLtJ_P0082616 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082617.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222449 31224273 + MGP_NODShiLtJ_P0082617 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0082618.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222449 31224273 + MGP_NODShiLtJ_P0082618 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0082619.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222449 31224273 + MGP_NODShiLtJ_P0082619 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082620.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222449 31224273 + MGP_NODShiLtJ_P0082620 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0082621.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222451 31224453 + U2af1l4 protein_coding processed_transcript MGP_NODShiLtJ_T0082622.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222451 31223642 + MGP_NODShiLtJ_P0082622 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0082623.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222452 31226495 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082624.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222453 31223570 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082625.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222460 31224266 + U2af1l4 protein_coding processed_transcript MGP_NODShiLtJ_T0082626.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222471 31224458 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082627.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222486 31223449 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082628.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222488 31224273 + MGP_NODShiLtJ_P0082628 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082629.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222490 31224273 + MGP_NODShiLtJ_P0082629 U2af1l4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082630.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222919 31223701 + U2af1l4 protein_coding retained_intron MGP_NODShiLtJ_T0082631.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222964 31223372 + U2af1l4 protein_coding processed_transcript MGP_NODShiLtJ_T0082632.1 MGP_NODShiLtJ_G0031843.1 mouse_genomes_project 7 31222972 31224273 + MGP_NODShiLtJ_P0082632 U2af1l4 protein_coding protein_coding MGP_NODShiLtJ_T0085441.1 MGP_NODShiLtJ_G0032649.1 mouse_genomes_project 7 123076081 123122422 - MGP_NODShiLtJ_P0085441 Trim66 protein_coding protein_coding MGP_NODShiLtJ_T0085442.1 MGP_NODShiLtJ_G0032649.1 mouse_genomes_project 7 123080583 123139917 - MGP_NODShiLtJ_P0085442 Trim66 protein_coding protein_coding MGP_NODShiLtJ_T0085443.1 MGP_NODShiLtJ_G0032649.1 mouse_genomes_project 7 123080583 123139917 - MGP_NODShiLtJ_P0085443 Trim66 protein_coding protein_coding MGP_NODShiLtJ_T0085444.1 MGP_NODShiLtJ_G0032649.1 mouse_genomes_project 7 123097763 123104111 - Trim66 protein_coding processed_transcript MGP_NODShiLtJ_T0082196.1 MGP_NODShiLtJ_G0031743.1 mouse_genomes_project 7 28414227 28422622 - MGP_NODShiLtJ_P0082196 Psmc4 protein_coding protein_coding MGP_NODShiLtJ_T0082197.1 MGP_NODShiLtJ_G0031743.1 mouse_genomes_project 7 28414236 28419543 - Psmc4 protein_coding retained_intron MGP_NODShiLtJ_T0082198.1 MGP_NODShiLtJ_G0031743.1 mouse_genomes_project 7 28414237 28422577 - Psmc4 protein_coding retained_intron MGP_NODShiLtJ_T0082199.1 MGP_NODShiLtJ_G0031743.1 mouse_genomes_project 7 28415108 28419870 - Psmc4 protein_coding retained_intron MGP_NODShiLtJ_T0082200.1 MGP_NODShiLtJ_G0031743.1 mouse_genomes_project 7 28415185 28420039 - Psmc4 protein_coding processed_transcript MGP_NODShiLtJ_T0082201.1 MGP_NODShiLtJ_G0031743.1 mouse_genomes_project 7 28419777 28422577 - Psmc4 protein_coding retained_intron MGP_NODShiLtJ_T0099493.1 MGP_NODShiLtJ_G0037887.1 mouse_genomes_project 7 72678448 72678549 - Gm23042 snRNA snRNA MGP_NODShiLtJ_T0010802.1 MGP_NODShiLtJ_G0008935.1 mouse_genomes_project 7 107903639 107903738 + Mir6394 miRNA miRNA MGP_NODShiLtJ_T0087321.1 MGP_NODShiLtJ_G0033060.1 mouse_genomes_project 7 158780209 158793487 - Ifitm10 protein_coding processed_transcript MGP_NODShiLtJ_T0087322.1 MGP_NODShiLtJ_G0033060.1 mouse_genomes_project 7 158780482 158833570 - MGP_NODShiLtJ_P0087322 Ifitm10 protein_coding protein_coding MGP_NODShiLtJ_T0087323.1 MGP_NODShiLtJ_G0033060.1 mouse_genomes_project 7 158780502 158833398 - Ifitm10 protein_coding processed_transcript MGP_NODShiLtJ_T0087324.1 MGP_NODShiLtJ_G0033060.1 mouse_genomes_project 7 158813965 158833388 - MGP_NODShiLtJ_P0087324 Ifitm10 protein_coding protein_coding MGP_NODShiLtJ_T0087325.1 MGP_NODShiLtJ_G0033060.1 mouse_genomes_project 7 158814379 158834935 - MGP_NODShiLtJ_P0087325 Ifitm10 protein_coding protein_coding MGP_NODShiLtJ_T0087326.1 MGP_NODShiLtJ_G0033060.1 mouse_genomes_project 7 158832271 158834010 - Ifitm10 protein_coding processed_transcript MGP_NODShiLtJ_T0085617.1 MGP_NODShiLtJ_G0032691.1 mouse_genomes_project 7 128656418 128683061 - MGP_NODShiLtJ_P0085617 protein_coding protein_coding MGP_NODShiLtJ_T0085618.1 MGP_NODShiLtJ_G0032691.1 mouse_genomes_project 7 128656474 128683059 - MGP_NODShiLtJ_P0085618 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015712.1 MGP_NODShiLtJ_G0013820.1 mouse_genomes_project 7 72686103 72686849 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081837.1 MGP_NODShiLtJ_G0031653.1 mouse_genomes_project 7 24417935 24421954 - MGP_NODShiLtJ_P0081837 Tex101 protein_coding protein_coding MGP_NODShiLtJ_T0102099.1 MGP_NODShiLtJ_G0040266.1 mouse_genomes_project 7 14603786 14609822 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081197.1 MGP_NODShiLtJ_G0031441.1 mouse_genomes_project 7 9656528 9657449 - MGP_NODShiLtJ_P0081197 Vmn1r72 protein_coding protein_coding MGP_NODShiLtJ_T0083351.1 MGP_NODShiLtJ_G0032010.1 mouse_genomes_project 7 47773056 47785070 - Scaf1 protein_coding retained_intron MGP_NODShiLtJ_T0083352.1 MGP_NODShiLtJ_G0032010.1 mouse_genomes_project 7 47773056 47785501 - MGP_NODShiLtJ_P0083352 Scaf1 protein_coding protein_coding MGP_NODShiLtJ_T0083353.1 MGP_NODShiLtJ_G0032010.1 mouse_genomes_project 7 47773056 47787460 - MGP_NODShiLtJ_P0083353 Scaf1 protein_coding protein_coding MGP_NODShiLtJ_T0083354.1 MGP_NODShiLtJ_G0032010.1 mouse_genomes_project 7 47780368 47787228 - Scaf1 protein_coding processed_transcript MGP_NODShiLtJ_T0083355.1 MGP_NODShiLtJ_G0032010.1 mouse_genomes_project 7 47783254 47784658 - Scaf1 protein_coding retained_intron MGP_NODShiLtJ_T0083356.1 MGP_NODShiLtJ_G0032010.1 mouse_genomes_project 7 47784348 47786954 - MGP_NODShiLtJ_P0083356 Scaf1 protein_coding protein_coding MGP_NODShiLtJ_T0083357.1 MGP_NODShiLtJ_G0032010.1 mouse_genomes_project 7 47785300 47786033 - Scaf1 protein_coding processed_transcript MGP_NODShiLtJ_T0087319.1 MGP_NODShiLtJ_G0033058.1 mouse_genomes_project 7 158681103 158683100 - MGP_NODShiLtJ_P0087319 Gm4559 protein_coding protein_coding MGP_NODShiLtJ_T0081082.1 MGP_NODShiLtJ_G0031382.1 mouse_genomes_project 7 2146670 2155677 - MGP_NODShiLtJ_P0081082 Sbk2 protein_coding protein_coding MGP_NODShiLtJ_T0081083.1 MGP_NODShiLtJ_G0031382.1 mouse_genomes_project 7 2147614 2155680 - MGP_NODShiLtJ_P0081083 Sbk2 protein_coding protein_coding MGP_NODShiLtJ_T0081084.1 MGP_NODShiLtJ_G0031382.1 mouse_genomes_project 7 2148055 2155686 - MGP_NODShiLtJ_P0081084 Sbk2 protein_coding protein_coding MGP_NODShiLtJ_T0081085.1 MGP_NODShiLtJ_G0031382.1 mouse_genomes_project 7 2151520 2155722 - Sbk2 protein_coding processed_transcript MGP_NODShiLtJ_T0081282.1 MGP_NODShiLtJ_G0031473.1 mouse_genomes_project 7 11348688 11349639 - MGP_NODShiLtJ_P0081282 Vmn1r86 protein_coding protein_coding MGP_NODShiLtJ_T0099473.1 MGP_NODShiLtJ_G0037867.1 mouse_genomes_project 7 15078869 15078996 - Gm26473 snRNA snRNA MGP_NODShiLtJ_T0085522.1 MGP_NODShiLtJ_G0032669.1 mouse_genomes_project 7 124637323 124649651 - MGP_NODShiLtJ_P0085522 Lyve1 protein_coding protein_coding MGP_NODShiLtJ_T0086172.1 MGP_NODShiLtJ_G0032803.1 mouse_genomes_project 7 141915707 141923330 + MGP_NODShiLtJ_P0086172 Mapk3 protein_coding protein_coding MGP_NODShiLtJ_T0086173.1 MGP_NODShiLtJ_G0032803.1 mouse_genomes_project 7 141915707 141922356 + MGP_NODShiLtJ_P0086173 Mapk3 protein_coding protein_coding MGP_NODShiLtJ_T0086174.1 MGP_NODShiLtJ_G0032803.1 mouse_genomes_project 7 141915752 141923329 + MGP_NODShiLtJ_P0086174 Mapk3 protein_coding protein_coding MGP_NODShiLtJ_T0086175.1 MGP_NODShiLtJ_G0032803.1 mouse_genomes_project 7 141917165 141922355 + MGP_NODShiLtJ_P0086175 Mapk3 protein_coding protein_coding MGP_NODShiLtJ_T0086176.1 MGP_NODShiLtJ_G0032803.1 mouse_genomes_project 7 141917174 141918522 + Mapk3 protein_coding retained_intron MGP_NODShiLtJ_T0086177.1 MGP_NODShiLtJ_G0032803.1 mouse_genomes_project 7 141917348 141920670 + Mapk3 protein_coding processed_transcript MGP_NODShiLtJ_T0086178.1 MGP_NODShiLtJ_G0032803.1 mouse_genomes_project 7 141918263 141922083 + MGP_NODShiLtJ_P0086178 Mapk3 protein_coding protein_coding MGP_NODShiLtJ_T0086179.1 MGP_NODShiLtJ_G0032803.1 mouse_genomes_project 7 141920787 141921871 + Mapk3 protein_coding retained_intron MGP_NODShiLtJ_T0002200.1 MGP_NODShiLtJ_G0002112.1 mouse_genomes_project 7 70978508 70978980 + TEC TEC MGP_NODShiLtJ_T0008758.1 MGP_NODShiLtJ_G0007070.1 mouse_genomes_project 7 36352920 36359321 - Gm45229 lincRNA lincRNA MGP_NODShiLtJ_T0015766.1 MGP_NODShiLtJ_G0013874.1 mouse_genomes_project 7 113609186 113620826 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083458.1 MGP_NODShiLtJ_G0032041.1 mouse_genomes_project 7 48282763 48287967 - MGP_NODShiLtJ_P0083458 Bax protein_coding protein_coding MGP_NODShiLtJ_T0081418.1 MGP_NODShiLtJ_G0031522.1 mouse_genomes_project 7 15637049 15647897 + MGP_NODShiLtJ_P0081418 Ap2s1 protein_coding protein_coding MGP_NODShiLtJ_T0081419.1 MGP_NODShiLtJ_G0031522.1 mouse_genomes_project 7 15637083 15647617 + MGP_NODShiLtJ_P0081419 Ap2s1 protein_coding protein_coding MGP_NODShiLtJ_T0081420.1 MGP_NODShiLtJ_G0031522.1 mouse_genomes_project 7 15637111 15647537 + MGP_NODShiLtJ_P0081420 Ap2s1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081421.1 MGP_NODShiLtJ_G0031522.1 mouse_genomes_project 7 15637177 15647351 + Ap2s1 protein_coding processed_transcript MGP_NODShiLtJ_T0081422.1 MGP_NODShiLtJ_G0031522.1 mouse_genomes_project 7 15645364 15647897 + Ap2s1 protein_coding retained_intron MGP_NODShiLtJ_T0081435.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15730100 15755143 + MGP_NODShiLtJ_P0081435 Strn4 protein_coding protein_coding MGP_NODShiLtJ_T0081436.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15730529 15755139 + MGP_NODShiLtJ_P0081436 Strn4 protein_coding protein_coding MGP_NODShiLtJ_T0081437.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15730590 15743038 + MGP_NODShiLtJ_P0081437 Strn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081438.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15736269 15738404 + Strn4 protein_coding processed_transcript MGP_NODShiLtJ_T0081439.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15737291 15748199 + MGP_NODShiLtJ_P0081439 Strn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081440.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15738279 15742975 + Strn4 protein_coding retained_intron MGP_NODShiLtJ_T0081441.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15743002 15745863 + Strn4 protein_coding retained_intron MGP_NODShiLtJ_T0081442.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15744357 15745733 + Strn4 protein_coding processed_transcript MGP_NODShiLtJ_T0081443.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15745322 15752194 + MGP_NODShiLtJ_P0081443 Strn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081444.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15746837 15748215 + Strn4 protein_coding retained_intron MGP_NODShiLtJ_T0081445.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15747388 15748876 + Strn4 protein_coding retained_intron MGP_NODShiLtJ_T0081446.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15750465 15755143 + Strn4 protein_coding retained_intron MGP_NODShiLtJ_T0081447.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15751846 15754448 + MGP_NODShiLtJ_P0081447 Strn4 protein_coding protein_coding MGP_NODShiLtJ_T0081448.1 MGP_NODShiLtJ_G0031525.1 mouse_genomes_project 7 15752767 15754231 + Strn4 protein_coding retained_intron MGP_NODShiLtJ_T0086885.1 MGP_NODShiLtJ_G0032943.1 mouse_genomes_project 7 151609602 151641706 - MGP_NODShiLtJ_P0086885 Mki67 protein_coding protein_coding MGP_NODShiLtJ_T0102067.1 MGP_NODShiLtJ_G0040234.1 mouse_genomes_project 7 9878119 9878509 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083155.1 MGP_NODShiLtJ_G0031971.1 mouse_genomes_project 7 46731427 46732523 + MGP_NODShiLtJ_P0083155 Klk1b27 protein_coding protein_coding MGP_NODShiLtJ_T0085174.1 MGP_NODShiLtJ_G0032512.1 mouse_genomes_project 7 116768696 116776522 - MGP_NODShiLtJ_P0085174 Olfr649 protein_coding protein_coding MGP_NODShiLtJ_T0085175.1 MGP_NODShiLtJ_G0032512.1 mouse_genomes_project 7 116768697 116769636 - MGP_NODShiLtJ_P0085175 Olfr649 protein_coding protein_coding MGP_NODShiLtJ_T0005223.1 MGP_NODShiLtJ_G0004428.1 mouse_genomes_project 7 136258270 136388391 - 4933432K03Rik antisense antisense MGP_NODShiLtJ_T0005224.1 MGP_NODShiLtJ_G0004428.1 mouse_genomes_project 7 136357283 136388393 - 4933432K03Rik antisense antisense MGP_NODShiLtJ_T0005225.1 MGP_NODShiLtJ_G0004428.1 mouse_genomes_project 7 136387832 136407763 - 4933432K03Rik antisense antisense MGP_NODShiLtJ_T0102160.1 MGP_NODShiLtJ_G0040326.1 mouse_genomes_project 7 52350499 52351391 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0080843.1 MGP_NODShiLtJ_G0031334.1 mouse_genomes_project 7 547720 557285 - MGP_NODShiLtJ_P0080843 Tfpt protein_coding protein_coding MGP_NODShiLtJ_T0080844.1 MGP_NODShiLtJ_G0031334.1 mouse_genomes_project 7 547720 557330 - MGP_NODShiLtJ_P0080844 Tfpt protein_coding protein_coding MGP_NODShiLtJ_T0080845.1 MGP_NODShiLtJ_G0031334.1 mouse_genomes_project 7 547731 556487 - MGP_NODShiLtJ_P0080845 Tfpt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080846.1 MGP_NODShiLtJ_G0031334.1 mouse_genomes_project 7 548175 556980 - Tfpt protein_coding processed_transcript MGP_NODShiLtJ_T0080847.1 MGP_NODShiLtJ_G0031334.1 mouse_genomes_project 7 548191 557228 - MGP_NODShiLtJ_P0080847 Tfpt protein_coding protein_coding MGP_NODShiLtJ_T0080848.1 MGP_NODShiLtJ_G0031334.1 mouse_genomes_project 7 548370 557260 - MGP_NODShiLtJ_P0080848 Tfpt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080849.1 MGP_NODShiLtJ_G0031334.1 mouse_genomes_project 7 551994 556980 - MGP_NODShiLtJ_P0080849 Tfpt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083139.1 MGP_NODShiLtJ_G0031962.1 mouse_genomes_project 7 46418077 46422453 + MGP_NODShiLtJ_P0083139 Klk10 protein_coding protein_coding MGP_NODShiLtJ_T0084536.1 MGP_NODShiLtJ_G0032299.1 mouse_genomes_project 7 97293002 97376453 - MGP_NODShiLtJ_P0084536 Tyr protein_coding protein_coding MGP_NODShiLtJ_T0005100.1 MGP_NODShiLtJ_G0004342.1 mouse_genomes_project 7 18326688 18334375 - Mypopos antisense antisense MGP_NODShiLtJ_T0005101.1 MGP_NODShiLtJ_G0004342.1 mouse_genomes_project 7 18327007 18334402 - Mypopos antisense antisense MGP_NODShiLtJ_T0005102.1 MGP_NODShiLtJ_G0004342.1 mouse_genomes_project 7 18328199 18330510 - Mypopos antisense antisense MGP_NODShiLtJ_T0005103.1 MGP_NODShiLtJ_G0004342.1 mouse_genomes_project 7 18330510 18334386 - Mypopos antisense antisense MGP_NODShiLtJ_T0083843.1 MGP_NODShiLtJ_G0032142.1 mouse_genomes_project 7 65286509 65296145 - MGP_NODShiLtJ_P0083843 Gm38393 protein_coding protein_coding MGP_NODShiLtJ_T0082821.1 MGP_NODShiLtJ_G0031880.1 mouse_genomes_project 7 32155467 32158362 - MGP_NODShiLtJ_P0082821 Scgb2b3 protein_coding protein_coding MGP_NODShiLtJ_T0087239.1 MGP_NODShiLtJ_G0033038.1 mouse_genomes_project 7 157784111 157788436 + MGP_NODShiLtJ_P0087239 Rplp2 protein_coding protein_coding MGP_NODShiLtJ_T0087240.1 MGP_NODShiLtJ_G0033038.1 mouse_genomes_project 7 157784372 157785358 + Rplp2 protein_coding retained_intron MGP_NODShiLtJ_T0087241.1 MGP_NODShiLtJ_G0033038.1 mouse_genomes_project 7 157784410 157785769 + Rplp2 protein_coding retained_intron MGP_NODShiLtJ_T0087242.1 MGP_NODShiLtJ_G0033038.1 mouse_genomes_project 7 157784453 157788201 + MGP_NODShiLtJ_P0087242 Rplp2 protein_coding protein_coding MGP_NODShiLtJ_T0087243.1 MGP_NODShiLtJ_G0033038.1 mouse_genomes_project 7 157784591 157788201 + MGP_NODShiLtJ_P0087243 Rplp2 protein_coding protein_coding MGP_NODShiLtJ_T0087244.1 MGP_NODShiLtJ_G0033038.1 mouse_genomes_project 7 157787566 157788200 + Rplp2 protein_coding processed_transcript MGP_NODShiLtJ_T0008928.1 MGP_NODShiLtJ_G0007186.1 mouse_genomes_project 7 139930109 139937745 + Gm45092 lincRNA lincRNA MGP_NODShiLtJ_T0099532.1 MGP_NODShiLtJ_G0037926.1 mouse_genomes_project 7 158445555 158445662 - Gm25416 snRNA snRNA MGP_NODShiLtJ_T0102211.1 MGP_NODShiLtJ_G0040377.1 mouse_genomes_project 7 118823312 119554112 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005251.1 MGP_NODShiLtJ_G0004449.1 mouse_genomes_project 7 157109425 157117896 - C330022C24Rik antisense antisense MGP_NODShiLtJ_T0102212.1 MGP_NODShiLtJ_G0040378.1 mouse_genomes_project 7 118826406 118827672 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081860.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24710323 24733997 + MGP_NODShiLtJ_P0081860 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081861.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24710448 24733994 + MGP_NODShiLtJ_P0081861 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081862.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24710462 24733994 + MGP_NODShiLtJ_P0081862 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081863.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24710467 24733999 + MGP_NODShiLtJ_P0081863 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081864.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24710476 24711790 + Arhgef1 protein_coding processed_transcript MGP_NODShiLtJ_T0081865.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24710482 24715290 + MGP_NODShiLtJ_P0081865 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081866.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24710486 24717360 + Arhgef1 protein_coding retained_intron MGP_NODShiLtJ_T0081867.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24711761 24722110 + MGP_NODShiLtJ_P0081867 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081868.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24711763 24733994 + Arhgef1 protein_coding retained_intron MGP_NODShiLtJ_T0081869.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24711810 24721259 + MGP_NODShiLtJ_P0081869 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081870.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24711812 24733997 + MGP_NODShiLtJ_P0081870 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081871.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24711845 24730496 + MGP_NODShiLtJ_P0081871 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081872.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24715044 24720799 + MGP_NODShiLtJ_P0081872 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081873.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24721275 24724743 + Arhgef1 protein_coding retained_intron MGP_NODShiLtJ_T0081874.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24723181 24733511 + MGP_NODShiLtJ_P0081874 Arhgef1 protein_coding protein_coding MGP_NODShiLtJ_T0081875.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24725552 24729784 + Arhgef1 protein_coding retained_intron MGP_NODShiLtJ_T0081876.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24730652 24732252 + Arhgef1 protein_coding retained_intron MGP_NODShiLtJ_T0081877.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24730757 24732890 + Arhgef1 protein_coding retained_intron MGP_NODShiLtJ_T0081878.1 MGP_NODShiLtJ_G0031662.1 mouse_genomes_project 7 24730767 24733341 + Arhgef1 protein_coding processed_transcript MGP_NODShiLtJ_T0084576.1 MGP_NODShiLtJ_G0032313.1 mouse_genomes_project 7 100469817 100514663 - MGP_NODShiLtJ_P0084576 Ccdc83 protein_coding protein_coding MGP_NODShiLtJ_T0084577.1 MGP_NODShiLtJ_G0032313.1 mouse_genomes_project 7 100482580 100514663 - MGP_NODShiLtJ_P0084577 Ccdc83 protein_coding protein_coding MGP_NODShiLtJ_T0084578.1 MGP_NODShiLtJ_G0032313.1 mouse_genomes_project 7 100483933 100514663 - MGP_NODShiLtJ_P0084578 Ccdc83 protein_coding protein_coding MGP_NODShiLtJ_T0005231.1 MGP_NODShiLtJ_G0004433.1 mouse_genomes_project 7 140629147 140630489 - Gm44876 antisense antisense MGP_NODShiLtJ_T0082205.1 MGP_NODShiLtJ_G0031745.1 mouse_genomes_project 7 28480598 28484138 - MGP_NODShiLtJ_P0082205 protein_coding protein_coding MGP_NODShiLtJ_T0080865.1 MGP_NODShiLtJ_G0031338.1 mouse_genomes_project 7 592843 604363 - MGP_NODShiLtJ_P0080865 Tmc4 protein_coding protein_coding MGP_NODShiLtJ_T0080866.1 MGP_NODShiLtJ_G0031338.1 mouse_genomes_project 7 592851 593944 - MGP_NODShiLtJ_P0080866 Tmc4 protein_coding protein_coding MGP_NODShiLtJ_T0080867.1 MGP_NODShiLtJ_G0031338.1 mouse_genomes_project 7 593018 597540 - Tmc4 protein_coding retained_intron MGP_NODShiLtJ_T0080868.1 MGP_NODShiLtJ_G0031338.1 mouse_genomes_project 7 597634 603512 - Tmc4 protein_coding retained_intron MGP_NODShiLtJ_T0080869.1 MGP_NODShiLtJ_G0031338.1 mouse_genomes_project 7 597748 604409 - Tmc4 protein_coding retained_intron MGP_NODShiLtJ_T0080870.1 MGP_NODShiLtJ_G0031338.1 mouse_genomes_project 7 602064 604369 - Tmc4 protein_coding retained_intron MGP_NODShiLtJ_T0015807.1 MGP_NODShiLtJ_G0013915.1 mouse_genomes_project 7 144067309 144067593 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082922.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36653005 36697273 + MGP_NODShiLtJ_P0082922 Cep89 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082923.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36653025 36697275 + MGP_NODShiLtJ_P0082923 Cep89 protein_coding protein_coding MGP_NODShiLtJ_T0082924.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36653077 36668443 + Cep89 protein_coding retained_intron MGP_NODShiLtJ_T0082925.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36653086 36667097 + Cep89 protein_coding processed_transcript MGP_NODShiLtJ_T0082926.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36653100 36667080 + MGP_NODShiLtJ_P0082926 Cep89 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082927.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36653138 36697278 + MGP_NODShiLtJ_P0082927 Cep89 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082928.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36674059 36675988 + Cep89 protein_coding processed_transcript MGP_NODShiLtJ_T0082929.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36674152 36678924 + Cep89 protein_coding retained_intron MGP_NODShiLtJ_T0082930.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36675521 36686939 + MGP_NODShiLtJ_P0082930 Cep89 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082931.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36676008 36686440 + Cep89 protein_coding processed_transcript MGP_NODShiLtJ_T0082932.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36685933 36691402 + Cep89 protein_coding retained_intron MGP_NODShiLtJ_T0082933.1 MGP_NODShiLtJ_G0031905.1 mouse_genomes_project 7 36687046 36697267 + MGP_NODShiLtJ_P0082933 Cep89 protein_coding protein_coding MGP_NODShiLtJ_T0008955.1 MGP_NODShiLtJ_G0007201.1 mouse_genomes_project 7 143851375 143866165 - Gm45018 lincRNA lincRNA MGP_NODShiLtJ_T0086582.1 MGP_NODShiLtJ_G0032879.1 mouse_genomes_project 7 143369109 143440742 + MGP_NODShiLtJ_P0086582 Itgam protein_coding protein_coding MGP_NODShiLtJ_T0086586.1 MGP_NODShiLtJ_G0032879.1 mouse_genomes_project 7 143427582 143439798 + MGP_NODShiLtJ_P0086586 Itgam protein_coding protein_coding MGP_NODShiLtJ_T0085139.1 MGP_NODShiLtJ_G0032480.1 mouse_genomes_project 7 115980446 115981400 - MGP_NODShiLtJ_P0085139 Olfr622 protein_coding protein_coding MGP_NODShiLtJ_T0087097.1 MGP_NODShiLtJ_G0033015.1 mouse_genomes_project 7 157372064 157382793 + MGP_NODShiLtJ_P0087097 B4galnt4 protein_coding protein_coding MGP_NODShiLtJ_T0083678.1 MGP_NODShiLtJ_G0032098.1 mouse_genomes_project 7 50057453 50115531 - MGP_NODShiLtJ_P0083678 Ptpn5 protein_coding protein_coding MGP_NODShiLtJ_T0083679.1 MGP_NODShiLtJ_G0032098.1 mouse_genomes_project 7 50057457 50114525 - MGP_NODShiLtJ_P0083679 Ptpn5 protein_coding protein_coding MGP_NODShiLtJ_T0102155.1 MGP_NODShiLtJ_G0040321.1 mouse_genomes_project 7 51854624 51855507 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083029.1 MGP_NODShiLtJ_G0031924.1 mouse_genomes_project 7 42753264 42762485 + MGP_NODShiLtJ_P0083029 protein_coding protein_coding MGP_NODShiLtJ_T0082467.1 MGP_NODShiLtJ_G0031812.1 mouse_genomes_project 7 30662778 30707844 - MGP_NODShiLtJ_P0082467 Gm26920 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098451.1 MGP_NODShiLtJ_G0036851.1 mouse_genomes_project 7 137887377 137887980 + Gm20274 sense_intronic sense_intronic MGP_NODShiLtJ_T0087391.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159124752 159132887 - MGP_NODShiLtJ_P0087391 Igf2 protein_coding protein_coding MGP_NODShiLtJ_T0087392.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159124755 159136695 - MGP_NODShiLtJ_P0087392 Igf2 protein_coding protein_coding MGP_NODShiLtJ_T0087393.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159124755 159132857 - MGP_NODShiLtJ_P0087393 Igf2 protein_coding protein_coding MGP_NODShiLtJ_T0087394.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159124755 159138513 - MGP_NODShiLtJ_P0087394 Igf2 protein_coding protein_coding MGP_NODShiLtJ_T0087395.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159124829 159128422 - Igf2 protein_coding processed_transcript MGP_NODShiLtJ_T0087396.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159129147 159144024 - MGP_NODShiLtJ_P0087396 Igf2 protein_coding protein_coding MGP_NODShiLtJ_T0087397.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159129440 159139078 - MGP_NODShiLtJ_P0087397 Igf2 protein_coding protein_coding MGP_NODShiLtJ_T0087398.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159129743 159131409 - MGP_NODShiLtJ_P0087398 Igf2 protein_coding protein_coding MGP_NODShiLtJ_T0087399.1 MGP_NODShiLtJ_G0033068.1 mouse_genomes_project 7 159130833 159138413 - Igf2 protein_coding retained_intron MGP_NODShiLtJ_T0087455.1 MGP_NODShiLtJ_G0033079.1 mouse_genomes_project 7 159981895 160021871 + MGP_NODShiLtJ_P0087455 Slc22a18 protein_coding protein_coding MGP_NODShiLtJ_T0087456.1 MGP_NODShiLtJ_G0033079.1 mouse_genomes_project 7 159994295 159998925 + Slc22a18 protein_coding processed_transcript MGP_NODShiLtJ_T0087457.1 MGP_NODShiLtJ_G0033079.1 mouse_genomes_project 7 159994342 160019590 + MGP_NODShiLtJ_P0087457 Slc22a18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087458.1 MGP_NODShiLtJ_G0033079.1 mouse_genomes_project 7 159994354 160021873 + MGP_NODShiLtJ_P0087458 Slc22a18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087459.1 MGP_NODShiLtJ_G0033079.1 mouse_genomes_project 7 159994379 160019591 + MGP_NODShiLtJ_P0087459 Slc22a18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015726.1 MGP_NODShiLtJ_G0013834.1 mouse_genomes_project 7 82952448 82952727 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082761.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803913 31807832 - MGP_NODShiLtJ_P0082761 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082762.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803913 31807647 - MGP_NODShiLtJ_P0082762 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082763.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803915 31805768 - Fxyd1 protein_coding retained_intron MGP_NODShiLtJ_T0082764.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803915 31807905 - MGP_NODShiLtJ_P0082764 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082765.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803915 31807036 - MGP_NODShiLtJ_P0082765 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082766.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803916 31805358 - MGP_NODShiLtJ_P0082766 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082767.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803916 31807894 - MGP_NODShiLtJ_P0082767 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082768.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803917 31804429 - Fxyd1 protein_coding retained_intron MGP_NODShiLtJ_T0082769.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803917 31807043 - MGP_NODShiLtJ_P0082769 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082770.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803917 31807024 - MGP_NODShiLtJ_P0082770 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082771.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803918 31807054 - MGP_NODShiLtJ_P0082771 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082772.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803943 31807820 - MGP_NODShiLtJ_P0082772 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082773.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31803963 31807055 - MGP_NODShiLtJ_P0082773 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082774.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31804170 31807946 - MGP_NODShiLtJ_P0082774 Fxyd1 protein_coding protein_coding MGP_NODShiLtJ_T0082775.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31804363 31806281 - Fxyd1 protein_coding retained_intron MGP_NODShiLtJ_T0082776.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31805724 31807861 - Fxyd1 protein_coding retained_intron MGP_NODShiLtJ_T0082777.1 MGP_NODShiLtJ_G0031872.1 mouse_genomes_project 7 31805998 31809335 - Fxyd1 protein_coding retained_intron MGP_NODShiLtJ_T0083080.1 MGP_NODShiLtJ_G0031942.1 mouse_genomes_project 7 46030524 46038846 + MGP_NODShiLtJ_P0083080 Gm38999 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085788.1 MGP_NODShiLtJ_G0032726.1 mouse_genomes_project 7 134346583 134380441 - MGP_NODShiLtJ_P0085788 Eri2 protein_coding protein_coding MGP_NODShiLtJ_T0085789.1 MGP_NODShiLtJ_G0032726.1 mouse_genomes_project 7 134349842 134380441 - MGP_NODShiLtJ_P0085789 Eri2 protein_coding protein_coding MGP_NODShiLtJ_T0085793.1 MGP_NODShiLtJ_G0032726.1 mouse_genomes_project 7 134360517 134380449 - Eri2 protein_coding retained_intron MGP_NODShiLtJ_T0085794.1 MGP_NODShiLtJ_G0032726.1 mouse_genomes_project 7 134361771 134380456 - MGP_NODShiLtJ_P0085794 Eri2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085795.1 MGP_NODShiLtJ_G0032726.1 mouse_genomes_project 7 134361788 134380433 - MGP_NODShiLtJ_P0085795 Eri2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085796.1 MGP_NODShiLtJ_G0032726.1 mouse_genomes_project 7 134362840 134380532 - MGP_NODShiLtJ_P0085796 Eri2 protein_coding protein_coding MGP_NODShiLtJ_T0085797.1 MGP_NODShiLtJ_G0032726.1 mouse_genomes_project 7 134364438 134374426 - Eri2 protein_coding retained_intron MGP_NODShiLtJ_T0002272.1 MGP_NODShiLtJ_G0002183.1 mouse_genomes_project 7 159627391 159627450 + TEC TEC MGP_NODShiLtJ_T0085366.1 MGP_NODShiLtJ_G0032593.1 mouse_genomes_project 7 120236697 120241424 - MGP_NODShiLtJ_P0085366 Olfr711 protein_coding protein_coding MGP_NODShiLtJ_T0081471.1 MGP_NODShiLtJ_G0031532.1 mouse_genomes_project 7 15902492 15907443 + MGP_NODShiLtJ_P0081471 Pnmal1 protein_coding protein_coding MGP_NODShiLtJ_T0085204.1 MGP_NODShiLtJ_G0032522.1 mouse_genomes_project 7 117183039 117184100 + MGP_NODShiLtJ_P0085204 Olfr652 protein_coding protein_coding MGP_NODShiLtJ_T0085205.1 MGP_NODShiLtJ_G0032522.1 mouse_genomes_project 7 117183119 117184067 + MGP_NODShiLtJ_P0085205 Olfr652 protein_coding protein_coding MGP_NODShiLtJ_T0002232.1 MGP_NODShiLtJ_G0002143.1 mouse_genomes_project 7 87954842 87956121 - TEC TEC MGP_NODShiLtJ_T0080811.1 MGP_NODShiLtJ_G0031325.1 mouse_genomes_project 7 132000 168526 - MGP_NODShiLtJ_P0080811 Nlrp12 protein_coding protein_coding MGP_NODShiLtJ_T0080812.1 MGP_NODShiLtJ_G0031325.1 mouse_genomes_project 7 156529 168653 - Nlrp12 protein_coding retained_intron MGP_NODShiLtJ_T0082661.1 MGP_NODShiLtJ_G0031853.1 mouse_genomes_project 7 31364509 31365107 + MGP_NODShiLtJ_P0082661 2200002J24Rik protein_coding protein_coding MGP_NODShiLtJ_T0086210.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141955828 141959851 - MGP_NODShiLtJ_P0086210 Aldoa protein_coding protein_coding MGP_NODShiLtJ_T0086211.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141955829 141962229 - MGP_NODShiLtJ_P0086211 Aldoa protein_coding protein_coding MGP_NODShiLtJ_T0086212.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141955830 141959738 - MGP_NODShiLtJ_P0086212 Aldoa protein_coding protein_coding MGP_NODShiLtJ_T0086213.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141956506 141958879 - Aldoa protein_coding processed_transcript MGP_NODShiLtJ_T0086214.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141956543 141958904 - Aldoa protein_coding retained_intron MGP_NODShiLtJ_T0086215.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141956543 141958348 - Aldoa protein_coding retained_intron MGP_NODShiLtJ_T0086216.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141956633 141961828 - MGP_NODShiLtJ_P0086216 Aldoa protein_coding protein_coding MGP_NODShiLtJ_T0086217.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141956865 141959590 - MGP_NODShiLtJ_P0086217 Aldoa protein_coding protein_coding MGP_NODShiLtJ_T0086218.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141957076 141959767 - Aldoa protein_coding retained_intron MGP_NODShiLtJ_T0086219.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141957262 141959706 - MGP_NODShiLtJ_P0086219 Aldoa protein_coding protein_coding MGP_NODShiLtJ_T0086220.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141957312 141961818 - MGP_NODShiLtJ_P0086220 Aldoa protein_coding protein_coding MGP_NODShiLtJ_T0086221.1 MGP_NODShiLtJ_G0032808.1 mouse_genomes_project 7 141957434 141962534 - MGP_NODShiLtJ_P0086221 Aldoa protein_coding protein_coding MGP_NODShiLtJ_T0086746.1 MGP_NODShiLtJ_G0032908.1 mouse_genomes_project 7 146960189 146963849 + MGP_NODShiLtJ_P0086746 Fam24a protein_coding protein_coding MGP_NODShiLtJ_T0098087.1 MGP_NODShiLtJ_G0036499.1 mouse_genomes_project 7 147734298 147734418 + n-R5s159 rRNA rRNA MGP_NODShiLtJ_T0018191.1 MGP_NODShiLtJ_G0015531.1 mouse_genomes_project 7 46944187 46944632 + processed_transcript lincRNA MGP_NODShiLtJ_T0018192.1 MGP_NODShiLtJ_G0015531.1 mouse_genomes_project 7 46944270 46944629 + processed_transcript retained_intron MGP_NODShiLtJ_T0018193.1 MGP_NODShiLtJ_G0015531.1 mouse_genomes_project 7 46944301 46944630 + processed_transcript retained_intron MGP_NODShiLtJ_T0081914.1 MGP_NODShiLtJ_G0031670.1 mouse_genomes_project 7 25077389 25083473 + MGP_NODShiLtJ_P0081914 Zfp526 protein_coding protein_coding MGP_NODShiLtJ_T0085778.1 MGP_NODShiLtJ_G0032722.1 mouse_genomes_project 7 134172430 134203331 + MGP_NODShiLtJ_P0085778 Acsm1 protein_coding protein_coding MGP_NODShiLtJ_T0085779.1 MGP_NODShiLtJ_G0032722.1 mouse_genomes_project 7 134183355 134232020 + MGP_NODShiLtJ_P0085779 Acsm1 protein_coding protein_coding MGP_NODShiLtJ_T0085780.1 MGP_NODShiLtJ_G0032722.1 mouse_genomes_project 7 134183387 134231740 + MGP_NODShiLtJ_P0085780 Acsm1 protein_coding protein_coding MGP_NODShiLtJ_T0081369.1 MGP_NODShiLtJ_G0031507.1 mouse_genomes_project 7 14967304 14998609 + MGP_NODShiLtJ_P0081369 Slc8a2 protein_coding protein_coding MGP_NODShiLtJ_T0081327.1 MGP_NODShiLtJ_G0031491.1 mouse_genomes_project 7 13062580 13091768 - MGP_NODShiLtJ_P0081327 Sult2a7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081328.1 MGP_NODShiLtJ_G0031491.1 mouse_genomes_project 7 13062697 13092771 - MGP_NODShiLtJ_P0081328 Sult2a7 protein_coding protein_coding MGP_NODShiLtJ_T0015693.1 MGP_NODShiLtJ_G0013801.1 mouse_genomes_project 7 52005700 52006205 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015690.1 MGP_NODShiLtJ_G0013798.1 mouse_genomes_project 7 49764872 49765426 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100787.1 MGP_NODShiLtJ_G0039181.1 mouse_genomes_project 7 158534950 158535044 + Gm25370 snoRNA snoRNA MGP_NODShiLtJ_T0085311.1 MGP_NODShiLtJ_G0032568.1 mouse_genomes_project 7 118711846 118716426 - MGP_NODShiLtJ_P0085311 Rrp8 protein_coding protein_coding MGP_NODShiLtJ_T0085312.1 MGP_NODShiLtJ_G0032568.1 mouse_genomes_project 7 118712043 118717021 - MGP_NODShiLtJ_P0085312 Rrp8 protein_coding protein_coding MGP_NODShiLtJ_T0085313.1 MGP_NODShiLtJ_G0032568.1 mouse_genomes_project 7 118712286 118713328 - Rrp8 protein_coding retained_intron MGP_NODShiLtJ_T0085314.1 MGP_NODShiLtJ_G0032568.1 mouse_genomes_project 7 118712652 118713710 - Rrp8 protein_coding processed_transcript MGP_NODShiLtJ_T0085315.1 MGP_NODShiLtJ_G0032568.1 mouse_genomes_project 7 118712652 118713593 - Rrp8 protein_coding retained_intron MGP_NODShiLtJ_T0085316.1 MGP_NODShiLtJ_G0032568.1 mouse_genomes_project 7 118714338 118716018 - Rrp8 protein_coding processed_transcript MGP_NODShiLtJ_T0082883.1 MGP_NODShiLtJ_G0031896.1 mouse_genomes_project 7 35851883 36007178 - MGP_NODShiLtJ_P0082883 Chst8 protein_coding protein_coding MGP_NODShiLtJ_T0082884.1 MGP_NODShiLtJ_G0031896.1 mouse_genomes_project 7 35851883 36007178 - MGP_NODShiLtJ_P0082884 Chst8 protein_coding protein_coding MGP_NODShiLtJ_T0082885.1 MGP_NODShiLtJ_G0031896.1 mouse_genomes_project 7 35852244 36007178 - MGP_NODShiLtJ_P0082885 Chst8 protein_coding protein_coding MGP_NODShiLtJ_T0082886.1 MGP_NODShiLtJ_G0031896.1 mouse_genomes_project 7 35853304 36007203 - Chst8 protein_coding processed_transcript MGP_NODShiLtJ_T0082887.1 MGP_NODShiLtJ_G0031896.1 mouse_genomes_project 7 35873118 35876279 - Chst8 protein_coding processed_transcript MGP_NODShiLtJ_T0082888.1 MGP_NODShiLtJ_G0031896.1 mouse_genomes_project 7 35873920 36007164 - Chst8 protein_coding processed_transcript MGP_NODShiLtJ_T0086806.1 MGP_NODShiLtJ_G0032925.1 mouse_genomes_project 7 148633480 148687850 + MGP_NODShiLtJ_P0086806 Zranb1 protein_coding protein_coding MGP_NODShiLtJ_T0086807.1 MGP_NODShiLtJ_G0032925.1 mouse_genomes_project 7 148684757 148686665 + Zranb1 protein_coding retained_intron MGP_NODShiLtJ_T0084960.1 MGP_NODShiLtJ_G0032396.1 mouse_genomes_project 7 113879918 113884332 + MGP_NODShiLtJ_P0084960 Phox2a protein_coding protein_coding MGP_NODShiLtJ_T0008768.1 MGP_NODShiLtJ_G0007080.1 mouse_genomes_project 7 39471987 39483549 - Gm45106 lincRNA lincRNA MGP_NODShiLtJ_T0081412.1 MGP_NODShiLtJ_G0031518.1 mouse_genomes_project 7 15330832 15354674 - MGP_NODShiLtJ_P0081412 Npas1 protein_coding protein_coding MGP_NODShiLtJ_T0085764.1 MGP_NODShiLtJ_G0032717.1 mouse_genomes_project 7 133977655 134002194 - MGP_NODShiLtJ_P0085764 Gp2 protein_coding protein_coding MGP_NODShiLtJ_T0085765.1 MGP_NODShiLtJ_G0032717.1 mouse_genomes_project 7 133977892 134021041 - MGP_NODShiLtJ_P0085765 Gp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080837.1 MGP_NODShiLtJ_G0031333.1 mouse_genomes_project 7 544771 547724 + MGP_NODShiLtJ_P0080837 Ndufa3 protein_coding protein_coding MGP_NODShiLtJ_T0080838.1 MGP_NODShiLtJ_G0031333.1 mouse_genomes_project 7 544778 547549 + Ndufa3 protein_coding retained_intron MGP_NODShiLtJ_T0080839.1 MGP_NODShiLtJ_G0031333.1 mouse_genomes_project 7 544783 545104 + Ndufa3 protein_coding retained_intron MGP_NODShiLtJ_T0080840.1 MGP_NODShiLtJ_G0031333.1 mouse_genomes_project 7 544784 547525 + MGP_NODShiLtJ_P0080840 Ndufa3 protein_coding protein_coding MGP_NODShiLtJ_T0080841.1 MGP_NODShiLtJ_G0031333.1 mouse_genomes_project 7 544789 547560 + MGP_NODShiLtJ_P0080841 Ndufa3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080842.1 MGP_NODShiLtJ_G0031333.1 mouse_genomes_project 7 545015 547482 + MGP_NODShiLtJ_P0080842 Ndufa3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083127.1 MGP_NODShiLtJ_G0031957.1 mouse_genomes_project 7 46288839 46295297 + MGP_NODShiLtJ_P0083127 Ctu1 protein_coding protein_coding MGP_NODShiLtJ_T0102073.1 MGP_NODShiLtJ_G0040240.1 mouse_genomes_project 7 10185938 10186931 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099486.1 MGP_NODShiLtJ_G0037880.1 mouse_genomes_project 7 49368090 49368197 + Gm22969 snRNA snRNA MGP_NODShiLtJ_T0002270.1 MGP_NODShiLtJ_G0002181.1 mouse_genomes_project 7 149891460 149895949 - TEC TEC MGP_NODShiLtJ_T0018229.1 MGP_NODShiLtJ_G0015543.1 mouse_genomes_project 7 81356470 81366005 + Gm38143 processed_transcript processed_transcript MGP_NODShiLtJ_T0085150.1 MGP_NODShiLtJ_G0032489.1 mouse_genomes_project 7 116293294 116294577 - MGP_NODShiLtJ_P0085150 Hbb-bh2 protein_coding protein_coding MGP_NODShiLtJ_T0002183.1 MGP_NODShiLtJ_G0002095.1 mouse_genomes_project 7 53308276 53310267 + TEC TEC MGP_NODShiLtJ_T0081340.1 MGP_NODShiLtJ_G0031498.1 mouse_genomes_project 7 14651247 14667576 - MGP_NODShiLtJ_P0081340 Crx protein_coding protein_coding MGP_NODShiLtJ_T0081341.1 MGP_NODShiLtJ_G0031498.1 mouse_genomes_project 7 14651248 14659271 - MGP_NODShiLtJ_P0081341 Crx protein_coding protein_coding MGP_NODShiLtJ_T0081342.1 MGP_NODShiLtJ_G0031498.1 mouse_genomes_project 7 14652526 14667480 - Crx protein_coding processed_transcript MGP_NODShiLtJ_T0081343.1 MGP_NODShiLtJ_G0031498.1 mouse_genomes_project 7 14652526 14667452 - MGP_NODShiLtJ_P0081343 Crx protein_coding protein_coding MGP_NODShiLtJ_T0081344.1 MGP_NODShiLtJ_G0031498.1 mouse_genomes_project 7 14653356 14658321 - MGP_NODShiLtJ_P0081344 Crx protein_coding protein_coding MGP_NODShiLtJ_T0083176.1 MGP_NODShiLtJ_G0031973.1 mouse_genomes_project 7 46935825 46940119 - MGP_NODShiLtJ_P0083176 Acpt protein_coding protein_coding MGP_NODShiLtJ_T0083177.1 MGP_NODShiLtJ_G0031973.1 mouse_genomes_project 7 46935832 46939946 - MGP_NODShiLtJ_P0083177 Acpt protein_coding protein_coding MGP_NODShiLtJ_T0084308.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88577155 88588957 - MGP_NODShiLtJ_P0084308 Fes protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084309.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88577157 88579835 - Fes protein_coding retained_intron MGP_NODShiLtJ_T0084310.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88577157 88579029 - MGP_NODShiLtJ_P0084310 Fes protein_coding protein_coding MGP_NODShiLtJ_T0084311.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88577157 88588967 - MGP_NODShiLtJ_P0084311 Fes protein_coding protein_coding MGP_NODShiLtJ_T0084312.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88577162 88588892 - MGP_NODShiLtJ_P0084312 Fes protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084313.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88577163 88588962 - MGP_NODShiLtJ_P0084313 Fes protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084314.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88577172 88588440 - MGP_NODShiLtJ_P0084314 Fes protein_coding protein_coding MGP_NODShiLtJ_T0084315.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88583608 88588916 - MGP_NODShiLtJ_P0084315 Fes protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084316.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88587933 88588902 - MGP_NODShiLtJ_P0084316 Fes protein_coding protein_coding MGP_NODShiLtJ_T0084317.1 MGP_NODShiLtJ_G0032231.1 mouse_genomes_project 7 88588059 88588915 - Fes protein_coding retained_intron MGP_NODShiLtJ_T0099502.1 MGP_NODShiLtJ_G0037896.1 mouse_genomes_project 7 102239073 102239218 - Gm23928 snRNA snRNA MGP_NODShiLtJ_T0082398.1 MGP_NODShiLtJ_G0031795.1 mouse_genomes_project 7 29847018 29851047 + MGP_NODShiLtJ_P0082398 Ppp1r14a protein_coding protein_coding MGP_NODShiLtJ_T0086664.1 MGP_NODShiLtJ_G0032894.1 mouse_genomes_project 7 144129577 144173964 + MGP_NODShiLtJ_P0086664 Sec23ip protein_coding protein_coding MGP_NODShiLtJ_T0086665.1 MGP_NODShiLtJ_G0032894.1 mouse_genomes_project 7 144129611 144134209 + Sec23ip protein_coding retained_intron MGP_NODShiLtJ_T0086666.1 MGP_NODShiLtJ_G0032894.1 mouse_genomes_project 7 144129669 144138767 + MGP_NODShiLtJ_P0086666 Sec23ip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086667.1 MGP_NODShiLtJ_G0032894.1 mouse_genomes_project 7 144130054 144135007 + MGP_NODShiLtJ_P0086667 Sec23ip protein_coding protein_coding MGP_NODShiLtJ_T0008826.1 MGP_NODShiLtJ_G0007120.1 mouse_genomes_project 7 79175188 79189510 - Gm36633 lincRNA lincRNA MGP_NODShiLtJ_T0102168.1 MGP_NODShiLtJ_G0040334.1 mouse_genomes_project 7 93750922 93751308 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085116.1 MGP_NODShiLtJ_G0032457.1 mouse_genomes_project 7 115435618 115436535 + MGP_NODShiLtJ_P0085116 Olfr593 protein_coding protein_coding MGP_NODShiLtJ_T0015683.1 MGP_NODShiLtJ_G0013791.1 mouse_genomes_project 7 46116147 46116700 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015585.1 MGP_NODShiLtJ_G0013693.1 mouse_genomes_project 7 12799841 12802002 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082399.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29861430 29874827 + MGP_NODShiLtJ_P0082399 Dpf1 protein_coding protein_coding MGP_NODShiLtJ_T0082400.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29861455 29875152 + MGP_NODShiLtJ_P0082400 Dpf1 protein_coding protein_coding MGP_NODShiLtJ_T0082401.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29865401 29874459 + MGP_NODShiLtJ_P0082401 Dpf1 protein_coding protein_coding MGP_NODShiLtJ_T0082402.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29865489 29874451 + Dpf1 protein_coding retained_intron MGP_NODShiLtJ_T0082403.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29865489 29874466 + MGP_NODShiLtJ_P0082403 Dpf1 protein_coding protein_coding MGP_NODShiLtJ_T0082404.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29865495 29875148 + Dpf1 protein_coding processed_transcript MGP_NODShiLtJ_T0082405.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29866990 29870768 + MGP_NODShiLtJ_P0082405 Dpf1 protein_coding protein_coding MGP_NODShiLtJ_T0082406.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29867083 29869175 + Dpf1 protein_coding processed_transcript MGP_NODShiLtJ_T0082407.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29870487 29873300 + MGP_NODShiLtJ_P0082407 Dpf1 protein_coding protein_coding MGP_NODShiLtJ_T0082408.1 MGP_NODShiLtJ_G0031796.1 mouse_genomes_project 7 29871705 29874126 + Dpf1 protein_coding retained_intron MGP_NODShiLtJ_T0102054.1 MGP_NODShiLtJ_G0040221.1 mouse_genomes_project 7 1247432 1248270 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083990.1 MGP_NODShiLtJ_G0032174.1 mouse_genomes_project 7 73851635 73857571 + MGP_NODShiLtJ_P0083990 Lysmd4 protein_coding protein_coding MGP_NODShiLtJ_T0083991.1 MGP_NODShiLtJ_G0032174.1 mouse_genomes_project 7 73851707 73857571 + MGP_NODShiLtJ_P0083991 Lysmd4 protein_coding protein_coding MGP_NODShiLtJ_T0015701.1 MGP_NODShiLtJ_G0013809.1 mouse_genomes_project 7 61779721 61780733 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100754.1 MGP_NODShiLtJ_G0039148.1 mouse_genomes_project 7 68851630 68851758 + Gm22494 snoRNA snoRNA MGP_NODShiLtJ_T0081604.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18730547 18743979 + MGP_NODShiLtJ_P0081604 Ercc1 protein_coding protein_coding MGP_NODShiLtJ_T0081605.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18732010 18743214 + Ercc1 protein_coding retained_intron MGP_NODShiLtJ_T0081606.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18732016 18737505 + Ercc1 protein_coding retained_intron MGP_NODShiLtJ_T0081607.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18732058 18742584 + MGP_NODShiLtJ_P0081607 Ercc1 protein_coding protein_coding MGP_NODShiLtJ_T0081608.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18732069 18737152 + MGP_NODShiLtJ_P0081608 Ercc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081609.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18735430 18739460 + MGP_NODShiLtJ_P0081609 Ercc1 protein_coding protein_coding MGP_NODShiLtJ_T0081610.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18736441 18742070 + Ercc1 protein_coding processed_transcript MGP_NODShiLtJ_T0081611.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18738922 18742921 + Ercc1 protein_coding retained_intron MGP_NODShiLtJ_T0081612.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18739387 18743977 + MGP_NODShiLtJ_P0081612 Ercc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081613.1 MGP_NODShiLtJ_G0031579.1 mouse_genomes_project 7 18742090 18743978 + Ercc1 protein_coding retained_intron MGP_NODShiLtJ_T0084111.1 MGP_NODShiLtJ_G0032195.1 mouse_genomes_project 7 86817550 86826277 - MGP_NODShiLtJ_P0084111 Mrpl46 protein_coding protein_coding MGP_NODShiLtJ_T0084112.1 MGP_NODShiLtJ_G0032195.1 mouse_genomes_project 7 86817914 86826719 - Mrpl46 protein_coding processed_transcript MGP_NODShiLtJ_T0081676.1 MGP_NODShiLtJ_G0031598.1 mouse_genomes_project 7 19090540 19093887 - MGP_NODShiLtJ_P0081676 Apoc4 protein_coding protein_coding MGP_NODShiLtJ_T0083450.1 MGP_NODShiLtJ_G0032039.1 mouse_genomes_project 7 48245014 48268723 + MGP_NODShiLtJ_P0083450 Gys1 protein_coding protein_coding MGP_NODShiLtJ_T0083451.1 MGP_NODShiLtJ_G0032039.1 mouse_genomes_project 7 48245047 48267934 + MGP_NODShiLtJ_P0083451 Gys1 protein_coding protein_coding MGP_NODShiLtJ_T0083452.1 MGP_NODShiLtJ_G0032039.1 mouse_genomes_project 7 48259680 48263914 + Gys1 protein_coding processed_transcript MGP_NODShiLtJ_T0083453.1 MGP_NODShiLtJ_G0032039.1 mouse_genomes_project 7 48259806 48263938 + Gys1 protein_coding processed_transcript MGP_NODShiLtJ_T0083454.1 MGP_NODShiLtJ_G0032039.1 mouse_genomes_project 7 48260329 48267426 + Gys1 protein_coding retained_intron MGP_NODShiLtJ_T0083455.1 MGP_NODShiLtJ_G0032039.1 mouse_genomes_project 7 48263111 48264203 + Gys1 protein_coding retained_intron MGP_NODShiLtJ_T0087292.1 MGP_NODShiLtJ_G0033049.1 mouse_genomes_project 7 158184554 158228070 + MGP_NODShiLtJ_P0087292 protein_coding protein_coding MGP_NODShiLtJ_T0084650.1 MGP_NODShiLtJ_G0032330.1 mouse_genomes_project 7 109009059 109031077 + MGP_NODShiLtJ_P0084650 Alg8 protein_coding protein_coding MGP_NODShiLtJ_T0084651.1 MGP_NODShiLtJ_G0032330.1 mouse_genomes_project 7 109025566 109030643 + Alg8 protein_coding retained_intron MGP_NODShiLtJ_T0084652.1 MGP_NODShiLtJ_G0032330.1 mouse_genomes_project 7 109025823 109030977 + Alg8 protein_coding processed_transcript MGP_NODShiLtJ_T0084653.1 MGP_NODShiLtJ_G0032330.1 mouse_genomes_project 7 109026151 109030540 + Alg8 protein_coding processed_transcript MGP_NODShiLtJ_T0084654.1 MGP_NODShiLtJ_G0032330.1 mouse_genomes_project 7 109026971 109030701 + Alg8 protein_coding retained_intron MGP_NODShiLtJ_T0084655.1 MGP_NODShiLtJ_G0032330.1 mouse_genomes_project 7 109029680 109030784 + Alg8 protein_coding retained_intron MGP_NODShiLtJ_T0086979.1 MGP_NODShiLtJ_G0032965.1 mouse_genomes_project 7 156149094 156183152 - MGP_NODShiLtJ_P0086979 Tubgcp2 protein_coding protein_coding MGP_NODShiLtJ_T0002240.1 MGP_NODShiLtJ_G0002151.1 mouse_genomes_project 7 103329703 103333460 + TEC TEC MGP_NODShiLtJ_T0081156.1 MGP_NODShiLtJ_G0031414.1 mouse_genomes_project 7 3783404 3831035 + MGP_NODShiLtJ_P0081156 Smim17 protein_coding protein_coding MGP_NODShiLtJ_T0081157.1 MGP_NODShiLtJ_G0031414.1 mouse_genomes_project 7 3783437 3796130 + Smim17 protein_coding processed_transcript MGP_NODShiLtJ_T0081159.1 MGP_NODShiLtJ_G0031414.1 mouse_genomes_project 7 3816408 3833727 + MGP_NODShiLtJ_P0081159 Smim17 protein_coding protein_coding MGP_NODShiLtJ_T0010827.1 MGP_NODShiLtJ_G0008960.1 mouse_genomes_project 7 156139968 156140034 - Mir7062 miRNA miRNA MGP_NODShiLtJ_T0087095.1 MGP_NODShiLtJ_G0033013.1 mouse_genomes_project 7 157307360 157308441 - MGP_NODShiLtJ_P0087095 Ifitm6 protein_coding protein_coding MGP_NODShiLtJ_T0100750.1 MGP_NODShiLtJ_G0039144.1 mouse_genomes_project 7 65074337 65074416 - snoRNA snoRNA MGP_NODShiLtJ_T0085136.1 MGP_NODShiLtJ_G0032477.1 mouse_genomes_project 7 115901411 115902368 + MGP_NODShiLtJ_P0085136 Olfr618 protein_coding protein_coding MGP_NODShiLtJ_T0081409.1 MGP_NODShiLtJ_G0031516.1 mouse_genomes_project 7 15273816 15311462 + MGP_NODShiLtJ_P0081409 Zc3h4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081410.1 MGP_NODShiLtJ_G0031516.1 mouse_genomes_project 7 15274131 15311459 + MGP_NODShiLtJ_P0081410 Zc3h4 protein_coding protein_coding MGP_NODShiLtJ_T0102185.1 MGP_NODShiLtJ_G0040351.1 mouse_genomes_project 7 95689917 95690545 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084587.1 MGP_NODShiLtJ_G0032315.1 mouse_genomes_project 7 100694440 100696789 + MGP_NODShiLtJ_P0084587 Ccdc89 protein_coding protein_coding MGP_NODShiLtJ_T0084365.1 MGP_NODShiLtJ_G0032238.1 mouse_genomes_project 7 89152232 89154387 - Nmb protein_coding retained_intron MGP_NODShiLtJ_T0084366.1 MGP_NODShiLtJ_G0032238.1 mouse_genomes_project 7 89152233 89155070 - MGP_NODShiLtJ_P0084366 Nmb protein_coding protein_coding MGP_NODShiLtJ_T0084367.1 MGP_NODShiLtJ_G0032238.1 mouse_genomes_project 7 89152239 89154368 - Nmb protein_coding retained_intron MGP_NODShiLtJ_T0084368.1 MGP_NODShiLtJ_G0032238.1 mouse_genomes_project 7 89152239 89155054 - MGP_NODShiLtJ_P0084368 Nmb protein_coding protein_coding MGP_NODShiLtJ_T0018264.1 MGP_NODShiLtJ_G0015562.1 mouse_genomes_project 7 146375012 146380044 - Gm5602 processed_transcript processed_transcript MGP_NODShiLtJ_T0087004.1 MGP_NODShiLtJ_G0032972.1 mouse_genomes_project 7 156277298 156300116 + MGP_NODShiLtJ_P0087004 Paox protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087005.1 MGP_NODShiLtJ_G0032972.1 mouse_genomes_project 7 156285389 156295761 + MGP_NODShiLtJ_P0087005 Paox protein_coding protein_coding MGP_NODShiLtJ_T0087006.1 MGP_NODShiLtJ_G0032972.1 mouse_genomes_project 7 156285440 156295761 + MGP_NODShiLtJ_P0087006 Paox protein_coding protein_coding MGP_NODShiLtJ_T0087163.1 MGP_NODShiLtJ_G0033027.1 mouse_genomes_project 7 157593692 157601394 - MGP_NODShiLtJ_P0087163 Cdhr5 protein_coding protein_coding MGP_NODShiLtJ_T0087164.1 MGP_NODShiLtJ_G0033027.1 mouse_genomes_project 7 157593692 157601394 - MGP_NODShiLtJ_P0087164 Cdhr5 protein_coding protein_coding MGP_NODShiLtJ_T0102213.1 MGP_NODShiLtJ_G0040379.1 mouse_genomes_project 7 119365566 119369162 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086881.1 MGP_NODShiLtJ_G0032939.1 mouse_genomes_project 7 151295026 151298229 + MGP_NODShiLtJ_P0086881 protein_coding protein_coding MGP_NODShiLtJ_T0081104.1 MGP_NODShiLtJ_G0031393.1 mouse_genomes_project 7 2253728 2257783 + MGP_NODShiLtJ_P0081104 Ccdc106 protein_coding protein_coding MGP_NODShiLtJ_T0010816.1 MGP_NODShiLtJ_G0008949.1 mouse_genomes_project 7 142725636 142725773 + Mir7060 miRNA miRNA MGP_NODShiLtJ_T0087313.1 MGP_NODShiLtJ_G0033053.1 mouse_genomes_project 7 158446714 158462648 - MGP_NODShiLtJ_P0087313 Dusp8 protein_coding protein_coding MGP_NODShiLtJ_T0087314.1 MGP_NODShiLtJ_G0033053.1 mouse_genomes_project 7 158450935 158463219 - MGP_NODShiLtJ_P0087314 Dusp8 protein_coding protein_coding MGP_NODShiLtJ_T0085820.1 MGP_NODShiLtJ_G0032732.1 mouse_genomes_project 7 134746249 134760051 - MGP_NODShiLtJ_P0085820 Zp2 protein_coding protein_coding MGP_NODShiLtJ_T0084232.1 MGP_NODShiLtJ_G0032220.1 mouse_genomes_project 7 88376590 88418589 + MGP_NODShiLtJ_P0084232 Sema4b protein_coding protein_coding MGP_NODShiLtJ_T0084233.1 MGP_NODShiLtJ_G0032220.1 mouse_genomes_project 7 88376627 88413918 + Sema4b protein_coding retained_intron MGP_NODShiLtJ_T0084234.1 MGP_NODShiLtJ_G0032220.1 mouse_genomes_project 7 88389388 88418473 + MGP_NODShiLtJ_P0084234 Sema4b protein_coding protein_coding MGP_NODShiLtJ_T0084235.1 MGP_NODShiLtJ_G0032220.1 mouse_genomes_project 7 88389483 88406134 + Sema4b protein_coding retained_intron MGP_NODShiLtJ_T0085556.1 MGP_NODShiLtJ_G0032676.1 mouse_genomes_project 7 126107654 126241116 + MGP_NODShiLtJ_P0085556 Mical2 protein_coding protein_coding MGP_NODShiLtJ_T0085557.1 MGP_NODShiLtJ_G0032676.1 mouse_genomes_project 7 126107688 126234507 + MGP_NODShiLtJ_P0085557 Mical2 protein_coding protein_coding MGP_NODShiLtJ_T0085558.1 MGP_NODShiLtJ_G0032676.1 mouse_genomes_project 7 126107688 126200895 + MGP_NODShiLtJ_P0085558 Mical2 protein_coding protein_coding MGP_NODShiLtJ_T0085559.1 MGP_NODShiLtJ_G0032676.1 mouse_genomes_project 7 126154191 126239897 + MGP_NODShiLtJ_P0085559 Mical2 protein_coding protein_coding MGP_NODShiLtJ_T0085560.1 MGP_NODShiLtJ_G0032676.1 mouse_genomes_project 7 126201508 126233630 + Mical2 protein_coding retained_intron MGP_NODShiLtJ_T0085561.1 MGP_NODShiLtJ_G0032676.1 mouse_genomes_project 7 126232867 126241116 + MGP_NODShiLtJ_P0085561 Mical2 protein_coding protein_coding MGP_NODShiLtJ_T0083240.1 MGP_NODShiLtJ_G0031983.1 mouse_genomes_project 7 47208356 47235451 - MGP_NODShiLtJ_P0083240 Mybpc2 protein_coding protein_coding MGP_NODShiLtJ_T0083241.1 MGP_NODShiLtJ_G0031983.1 mouse_genomes_project 7 47208489 47240759 - MGP_NODShiLtJ_P0083241 Mybpc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080828.1 MGP_NODShiLtJ_G0031330.1 mouse_genomes_project 7 375577 387862 + MGP_NODShiLtJ_P0080828 Cacng6 protein_coding protein_coding MGP_NODShiLtJ_T0080829.1 MGP_NODShiLtJ_G0031330.1 mouse_genomes_project 7 376044 387356 + MGP_NODShiLtJ_P0080829 Cacng6 protein_coding protein_coding MGP_NODShiLtJ_T0102119.1 MGP_NODShiLtJ_G0040285.1 mouse_genomes_project 7 34822507 34823784 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015756.1 MGP_NODShiLtJ_G0013864.1 mouse_genomes_project 7 109253846 109254537 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081229.1 MGP_NODShiLtJ_G0031460.1 mouse_genomes_project 7 11104217 11115046 + Zfp128 protein_coding retained_intron MGP_NODShiLtJ_T0081230.1 MGP_NODShiLtJ_G0031460.1 mouse_genomes_project 7 11104217 11116599 + MGP_NODShiLtJ_P0081230 Zfp128 protein_coding protein_coding MGP_NODShiLtJ_T0008897.1 MGP_NODShiLtJ_G0007167.1 mouse_genomes_project 7 111619355 111620890 - F730035P03Rik lincRNA lincRNA MGP_NODShiLtJ_T0085212.1 MGP_NODShiLtJ_G0032529.1 mouse_genomes_project 7 117264611 117265151 - MGP_NODShiLtJ_P0085212 protein_coding protein_coding MGP_NODShiLtJ_T0102104.1 MGP_NODShiLtJ_G0040271.1 mouse_genomes_project 7 17511140 17521863 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086984.1 MGP_NODShiLtJ_G0032969.1 mouse_genomes_project 7 156241420 156253710 + MGP_NODShiLtJ_P0086984 Prap1 protein_coding protein_coding MGP_NODShiLtJ_T0018245.1 MGP_NODShiLtJ_G0015552.1 mouse_genomes_project 7 130344552 130368569 - processed_transcript sense_overlapping MGP_NODShiLtJ_T0018246.1 MGP_NODShiLtJ_G0015552.1 mouse_genomes_project 7 130344691 130368516 - processed_transcript sense_overlapping MGP_NODShiLtJ_T0018247.1 MGP_NODShiLtJ_G0015552.1 mouse_genomes_project 7 130367305 130368508 - processed_transcript retained_intron MGP_NODShiLtJ_T0080850.1 MGP_NODShiLtJ_G0031335.1 mouse_genomes_project 7 557385 569886 + MGP_NODShiLtJ_P0080850 Prpf31 protein_coding protein_coding MGP_NODShiLtJ_T0080851.1 MGP_NODShiLtJ_G0031335.1 mouse_genomes_project 7 557385 569887 + MGP_NODShiLtJ_P0080851 Prpf31 protein_coding protein_coding MGP_NODShiLtJ_T0080852.1 MGP_NODShiLtJ_G0031335.1 mouse_genomes_project 7 557392 558822 + Prpf31 protein_coding retained_intron MGP_NODShiLtJ_T0080853.1 MGP_NODShiLtJ_G0031335.1 mouse_genomes_project 7 557459 564458 + MGP_NODShiLtJ_P0080853 Prpf31 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080854.1 MGP_NODShiLtJ_G0031335.1 mouse_genomes_project 7 557957 568630 + MGP_NODShiLtJ_P0080854 Prpf31 protein_coding protein_coding MGP_NODShiLtJ_T0080855.1 MGP_NODShiLtJ_G0031335.1 mouse_genomes_project 7 563495 564458 + Prpf31 protein_coding retained_intron MGP_NODShiLtJ_T0008961.1 MGP_NODShiLtJ_G0007206.1 mouse_genomes_project 7 145285486 145309009 + Gm44778 lincRNA lincRNA MGP_NODShiLtJ_T0011568.1 MGP_NODShiLtJ_G0009701.1 mouse_genomes_project 7 11627345 11627625 + Gm24909 misc_RNA misc_RNA MGP_NODShiLtJ_T0101388.1 MGP_NODShiLtJ_G0039600.1 mouse_genomes_project 7 16744769 16754546 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101389.1 MGP_NODShiLtJ_G0039600.1 mouse_genomes_project 7 16744769 16754177 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0085421.1 MGP_NODShiLtJ_G0032641.1 mouse_genomes_project 7 122470346 122471348 - MGP_NODShiLtJ_P0085421 Olfr518 protein_coding protein_coding MGP_NODShiLtJ_T0100748.1 MGP_NODShiLtJ_G0039142.1 mouse_genomes_project 7 64804027 64804106 - snoRNA snoRNA MGP_NODShiLtJ_T0015745.1 MGP_NODShiLtJ_G0013853.1 mouse_genomes_project 7 98734630 98735610 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010782.1 MGP_NODShiLtJ_G0008915.1 mouse_genomes_project 7 67875759 67875851 - Mir344c miRNA miRNA MGP_NODShiLtJ_T0082823.1 MGP_NODShiLtJ_G0031882.1 mouse_genomes_project 7 34661537 34664191 - MGP_NODShiLtJ_P0082823 Scgb2b24 protein_coding protein_coding MGP_NODShiLtJ_T0087408.1 MGP_NODShiLtJ_G0033070.1 mouse_genomes_project 7 159315008 159333090 + MGP_NODShiLtJ_P0087408 protein_coding protein_coding MGP_NODShiLtJ_T0087409.1 MGP_NODShiLtJ_G0033070.1 mouse_genomes_project 7 159330174 159332289 + protein_coding processed_transcript MGP_NODShiLtJ_T0083154.1 MGP_NODShiLtJ_G0031970.1 mouse_genomes_project 7 46652111 46658034 + MGP_NODShiLtJ_P0083154 Klk1b9 protein_coding protein_coding MGP_NODShiLtJ_T0081345.1 MGP_NODShiLtJ_G0031499.1 mouse_genomes_project 7 14670199 14691450 + MGP_NODShiLtJ_P0081345 protein_coding protein_coding MGP_NODShiLtJ_T0015710.1 MGP_NODShiLtJ_G0013818.1 mouse_genomes_project 7 71656562 71657136 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005141.1 MGP_NODShiLtJ_G0004372.1 mouse_genomes_project 7 35534680 35541919 + Gm12764 antisense antisense MGP_NODShiLtJ_T0008746.1 MGP_NODShiLtJ_G0007059.1 mouse_genomes_project 7 31319059 31322898 + Gm26610 lincRNA lincRNA MGP_NODShiLtJ_T0084122.1 MGP_NODShiLtJ_G0032198.1 mouse_genomes_project 7 86951717 86964201 + Aen protein_coding processed_transcript MGP_NODShiLtJ_T0084123.1 MGP_NODShiLtJ_G0032198.1 mouse_genomes_project 7 86951790 86964201 + MGP_NODShiLtJ_P0084123 Aen protein_coding protein_coding MGP_NODShiLtJ_T0084124.1 MGP_NODShiLtJ_G0032198.1 mouse_genomes_project 7 86951797 86961373 + MGP_NODShiLtJ_P0084124 Aen protein_coding protein_coding MGP_NODShiLtJ_T0084125.1 MGP_NODShiLtJ_G0032198.1 mouse_genomes_project 7 86951872 86961370 + MGP_NODShiLtJ_P0084125 Aen protein_coding protein_coding MGP_NODShiLtJ_T0084126.1 MGP_NODShiLtJ_G0032198.1 mouse_genomes_project 7 86953894 86955810 + MGP_NODShiLtJ_P0084126 Aen protein_coding protein_coding MGP_NODShiLtJ_T0084127.1 MGP_NODShiLtJ_G0032198.1 mouse_genomes_project 7 86955348 86958990 + Aen protein_coding processed_transcript MGP_NODShiLtJ_T0084128.1 MGP_NODShiLtJ_G0032198.1 mouse_genomes_project 7 86955566 86960353 + MGP_NODShiLtJ_P0084128 Aen protein_coding protein_coding MGP_NODShiLtJ_T0100772.1 MGP_NODShiLtJ_G0039166.1 mouse_genomes_project 7 123737592 123737775 + Snora23 snoRNA snoRNA MGP_NODShiLtJ_T0099509.1 MGP_NODShiLtJ_G0037903.1 mouse_genomes_project 7 121553315 121553373 - Gm25424 snRNA snRNA MGP_NODShiLtJ_T0002159.1 MGP_NODShiLtJ_G0002071.1 mouse_genomes_project 7 35535778 35540752 + TEC TEC MGP_NODShiLtJ_T0018179.1 MGP_NODShiLtJ_G0015523.1 mouse_genomes_project 7 27713532 27714766 + Gm44924 processed_transcript processed_transcript MGP_NODShiLtJ_T0087035.1 MGP_NODShiLtJ_G0032993.1 mouse_genomes_project 7 156905473 156906433 + MGP_NODShiLtJ_P0087035 Olfr539 protein_coding protein_coding MGP_NODShiLtJ_T0008798.1 MGP_NODShiLtJ_G0007100.1 mouse_genomes_project 7 70361174 70370547 + lincRNA lincRNA MGP_NODShiLtJ_T0084515.1 MGP_NODShiLtJ_G0032288.1 mouse_genomes_project 7 95910044 95911037 + MGP_NODShiLtJ_P0084515 Olfr299 protein_coding protein_coding MGP_NODShiLtJ_T0083981.1 MGP_NODShiLtJ_G0032172.1 mouse_genomes_project 7 73347451 73433015 + MGP_NODShiLtJ_P0083981 Cers3 protein_coding protein_coding MGP_NODShiLtJ_T0085165.1 MGP_NODShiLtJ_G0032504.1 mouse_genomes_project 7 116623623 116624568 - MGP_NODShiLtJ_P0085165 protein_coding protein_coding MGP_NODShiLtJ_T0082282.1 MGP_NODShiLtJ_G0031769.1 mouse_genomes_project 7 29158446 29165132 + MGP_NODShiLtJ_P0082282 Fbxo27 protein_coding protein_coding MGP_NODShiLtJ_T0082283.1 MGP_NODShiLtJ_G0031769.1 mouse_genomes_project 7 29158636 29159112 + MGP_NODShiLtJ_P0082283 Fbxo27 protein_coding protein_coding MGP_NODShiLtJ_T0082284.1 MGP_NODShiLtJ_G0031769.1 mouse_genomes_project 7 29158893 29166132 + MGP_NODShiLtJ_P0082284 Fbxo27 protein_coding protein_coding MGP_NODShiLtJ_T0082285.1 MGP_NODShiLtJ_G0031769.1 mouse_genomes_project 7 29162444 29163755 + Fbxo27 protein_coding processed_transcript MGP_NODShiLtJ_T0085567.1 MGP_NODShiLtJ_G0032678.1 mouse_genomes_project 7 126317968 126483847 + MGP_NODShiLtJ_P0085567 Parva protein_coding protein_coding MGP_NODShiLtJ_T0085568.1 MGP_NODShiLtJ_G0032678.1 mouse_genomes_project 7 126318161 126485911 + MGP_NODShiLtJ_P0085568 Parva protein_coding protein_coding MGP_NODShiLtJ_T0085569.1 MGP_NODShiLtJ_G0032678.1 mouse_genomes_project 7 126318360 126446333 + MGP_NODShiLtJ_P0085569 Parva protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085570.1 MGP_NODShiLtJ_G0032678.1 mouse_genomes_project 7 126391550 126439889 + Parva protein_coding processed_transcript MGP_NODShiLtJ_T0085571.1 MGP_NODShiLtJ_G0032678.1 mouse_genomes_project 7 126410158 126483188 + MGP_NODShiLtJ_P0085571 Parva protein_coding protein_coding MGP_NODShiLtJ_T0085572.1 MGP_NODShiLtJ_G0032678.1 mouse_genomes_project 7 126463469 126473989 + Parva protein_coding processed_transcript MGP_NODShiLtJ_T0082219.1 MGP_NODShiLtJ_G0031749.1 mouse_genomes_project 7 28671101 28672493 + MGP_NODShiLtJ_P0082219 Eid2 protein_coding protein_coding MGP_NODShiLtJ_T0010806.1 MGP_NODShiLtJ_G0008939.1 mouse_genomes_project 7 113947877 113947973 + Gm22655 miRNA miRNA MGP_NODShiLtJ_T0081105.1 MGP_NODShiLtJ_G0031394.1 mouse_genomes_project 7 2260371 2279873 + MGP_NODShiLtJ_P0081105 U2af2 protein_coding protein_coding MGP_NODShiLtJ_T0081106.1 MGP_NODShiLtJ_G0031394.1 mouse_genomes_project 7 2265655 2277515 + MGP_NODShiLtJ_P0081106 U2af2 protein_coding protein_coding MGP_NODShiLtJ_T0100786.1 MGP_NODShiLtJ_G0039180.1 mouse_genomes_project 7 157785544 157785681 + Snora52 snoRNA snoRNA MGP_NODShiLtJ_T0083192.1 MGP_NODShiLtJ_G0031977.1 mouse_genomes_project 7 47077621 47094438 + MGP_NODShiLtJ_P0083192 Syt3 protein_coding protein_coding MGP_NODShiLtJ_T0083193.1 MGP_NODShiLtJ_G0031977.1 mouse_genomes_project 7 47077646 47078967 + Syt3 protein_coding processed_transcript MGP_NODShiLtJ_T0083194.1 MGP_NODShiLtJ_G0031977.1 mouse_genomes_project 7 47077673 47094595 + MGP_NODShiLtJ_P0083194 Syt3 protein_coding protein_coding MGP_NODShiLtJ_T0083195.1 MGP_NODShiLtJ_G0031977.1 mouse_genomes_project 7 47078123 47079569 + MGP_NODShiLtJ_P0083195 Syt3 protein_coding protein_coding MGP_NODShiLtJ_T0083196.1 MGP_NODShiLtJ_G0031977.1 mouse_genomes_project 7 47078123 47079639 + MGP_NODShiLtJ_P0083196 Syt3 protein_coding protein_coding MGP_NODShiLtJ_T0083197.1 MGP_NODShiLtJ_G0031977.1 mouse_genomes_project 7 47078387 47094172 + MGP_NODShiLtJ_P0083197 Syt3 protein_coding protein_coding MGP_NODShiLtJ_T0002217.1 MGP_NODShiLtJ_G0002128.1 mouse_genomes_project 7 83608591 83610647 + TEC TEC MGP_NODShiLtJ_T0008958.1 MGP_NODShiLtJ_G0007204.1 mouse_genomes_project 7 144849064 144853896 - Gm44591 lincRNA lincRNA MGP_NODShiLtJ_T0008829.1 MGP_NODShiLtJ_G0007123.1 mouse_genomes_project 7 79950321 79950661 - Gm28744 lincRNA lincRNA MGP_NODShiLtJ_T0081533.1 MGP_NODShiLtJ_G0031560.1 mouse_genomes_project 7 18337010 18339746 + MGP_NODShiLtJ_P0081533 Irf2bp1 protein_coding protein_coding MGP_NODShiLtJ_T0082910.1 MGP_NODShiLtJ_G0031902.1 mouse_genomes_project 7 36508567 36555873 - MGP_NODShiLtJ_P0082910 Gpatch1 protein_coding protein_coding MGP_NODShiLtJ_T0082911.1 MGP_NODShiLtJ_G0031902.1 mouse_genomes_project 7 36508575 36555854 - MGP_NODShiLtJ_P0082911 Gpatch1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082912.1 MGP_NODShiLtJ_G0031902.1 mouse_genomes_project 7 36518688 36555873 - MGP_NODShiLtJ_P0082912 Gpatch1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082913.1 MGP_NODShiLtJ_G0031902.1 mouse_genomes_project 7 36518721 36520389 - Gpatch1 protein_coding retained_intron MGP_NODShiLtJ_T0082914.1 MGP_NODShiLtJ_G0031902.1 mouse_genomes_project 7 36543400 36555828 - Gpatch1 protein_coding retained_intron MGP_NODShiLtJ_T0082442.1 MGP_NODShiLtJ_G0031804.1 mouse_genomes_project 7 30456557 30472851 + MGP_NODShiLtJ_P0082442 Zfp420 protein_coding protein_coding MGP_NODShiLtJ_T0082443.1 MGP_NODShiLtJ_G0031804.1 mouse_genomes_project 7 30456582 30458193 + Zfp420 protein_coding retained_intron MGP_NODShiLtJ_T0082444.1 MGP_NODShiLtJ_G0031804.1 mouse_genomes_project 7 30456589 30473639 + Zfp420 protein_coding processed_transcript MGP_NODShiLtJ_T0082445.1 MGP_NODShiLtJ_G0031804.1 mouse_genomes_project 7 30456619 30473172 + MGP_NODShiLtJ_P0082445 Zfp420 protein_coding protein_coding MGP_NODShiLtJ_T0082446.1 MGP_NODShiLtJ_G0031804.1 mouse_genomes_project 7 30468870 30470882 + Zfp420 protein_coding retained_intron MGP_NODShiLtJ_T0082581.1 MGP_NODShiLtJ_G0031839.1 mouse_genomes_project 7 31197067 31210239 - MGP_NODShiLtJ_P0082581 Proser3 protein_coding protein_coding MGP_NODShiLtJ_T0082582.1 MGP_NODShiLtJ_G0031839.1 mouse_genomes_project 7 31197441 31207649 - MGP_NODShiLtJ_P0082582 Proser3 protein_coding protein_coding MGP_NODShiLtJ_T0082583.1 MGP_NODShiLtJ_G0031839.1 mouse_genomes_project 7 31200457 31210276 - Proser3 protein_coding retained_intron MGP_NODShiLtJ_T0082584.1 MGP_NODShiLtJ_G0031839.1 mouse_genomes_project 7 31207022 31210272 - MGP_NODShiLtJ_P0082584 Proser3 protein_coding protein_coding MGP_NODShiLtJ_T0102079.1 MGP_NODShiLtJ_G0040246.1 mouse_genomes_project 7 10584704 10585395 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081946.1 MGP_NODShiLtJ_G0031677.1 mouse_genomes_project 7 25187257 25245129 + MGP_NODShiLtJ_P0081946 Megf8 protein_coding protein_coding MGP_NODShiLtJ_T0081947.1 MGP_NODShiLtJ_G0031677.1 mouse_genomes_project 7 25225181 25245126 + Megf8 protein_coding retained_intron MGP_NODShiLtJ_T0082118.1 MGP_NODShiLtJ_G0031723.1 mouse_genomes_project 7 27622894 27633433 - MGP_NODShiLtJ_P0082118 Gm20479 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081004.1 MGP_NODShiLtJ_G0031361.1 mouse_genomes_project 7 1626448 1633113 - MGP_NODShiLtJ_P0081004 Syt5 protein_coding protein_coding MGP_NODShiLtJ_T0081005.1 MGP_NODShiLtJ_G0031361.1 mouse_genomes_project 7 1632233 1634087 - MGP_NODShiLtJ_P0081005 Syt5 protein_coding protein_coding MGP_NODShiLtJ_T0081006.1 MGP_NODShiLtJ_G0031361.1 mouse_genomes_project 7 1632838 1633519 - MGP_NODShiLtJ_P0081006 Syt5 protein_coding protein_coding MGP_NODShiLtJ_T0082726.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31684388 31705861 - MGP_NODShiLtJ_P0082726 protein_coding protein_coding MGP_NODShiLtJ_T0082727.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31684392 31704406 - protein_coding processed_transcript MGP_NODShiLtJ_T0082728.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31694455 31704469 - MGP_NODShiLtJ_P0082728 protein_coding protein_coding MGP_NODShiLtJ_T0082729.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31694461 31704497 - protein_coding processed_transcript MGP_NODShiLtJ_T0082730.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31694461 31704658 - MGP_NODShiLtJ_P0082730 protein_coding protein_coding MGP_NODShiLtJ_T0082731.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31694461 31704658 - MGP_NODShiLtJ_P0082731 protein_coding protein_coding MGP_NODShiLtJ_T0082732.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31694461 31704658 - MGP_NODShiLtJ_P0082732 protein_coding protein_coding MGP_NODShiLtJ_T0082733.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31694461 31703670 - MGP_NODShiLtJ_P0082733 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082734.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31694632 31703680 - protein_coding retained_intron MGP_NODShiLtJ_T0082735.1 MGP_NODShiLtJ_G0031867.1 mouse_genomes_project 7 31694722 31704136 - MGP_NODShiLtJ_P0082735 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085173.1 MGP_NODShiLtJ_G0032511.1 mouse_genomes_project 7 116757748 116758699 - MGP_NODShiLtJ_P0085173 Olfr648 protein_coding protein_coding MGP_NODShiLtJ_T0015728.1 MGP_NODShiLtJ_G0013836.1 mouse_genomes_project 7 85176057 85176560 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084784.1 MGP_NODShiLtJ_G0032359.1 mouse_genomes_project 7 111284331 111290144 - MGP_NODShiLtJ_P0084784 Rps3 protein_coding protein_coding MGP_NODShiLtJ_T0084785.1 MGP_NODShiLtJ_G0032359.1 mouse_genomes_project 7 111284339 111290057 - MGP_NODShiLtJ_P0084785 Rps3 protein_coding protein_coding MGP_NODShiLtJ_T0084786.1 MGP_NODShiLtJ_G0032359.1 mouse_genomes_project 7 111285298 111290056 - Rps3 protein_coding retained_intron MGP_NODShiLtJ_T0084787.1 MGP_NODShiLtJ_G0032359.1 mouse_genomes_project 7 111286115 111290040 - Rps3 protein_coding retained_intron MGP_NODShiLtJ_T0008892.1 MGP_NODShiLtJ_G0007163.1 mouse_genomes_project 7 110300624 110321466 - A630091E08Rik lincRNA lincRNA MGP_NODShiLtJ_T0101386.1 MGP_NODShiLtJ_G0039599.1 mouse_genomes_project 7 15541378 15549727 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101387.1 MGP_NODShiLtJ_G0039599.1 mouse_genomes_project 7 15541760 15544208 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0097825.1 MGP_NODShiLtJ_G0036237.1 mouse_genomes_project 7 78464970 78465541 - pseudogene pseudogene MGP_NODShiLtJ_T0081361.1 MGP_NODShiLtJ_G0031506.1 mouse_genomes_project 7 14956819 14958449 + Kptn protein_coding retained_intron MGP_NODShiLtJ_T0081362.1 MGP_NODShiLtJ_G0031506.1 mouse_genomes_project 7 14956819 14964499 + MGP_NODShiLtJ_P0081362 Kptn protein_coding protein_coding MGP_NODShiLtJ_T0081363.1 MGP_NODShiLtJ_G0031506.1 mouse_genomes_project 7 14956853 14957897 + Kptn protein_coding retained_intron MGP_NODShiLtJ_T0081364.1 MGP_NODShiLtJ_G0031506.1 mouse_genomes_project 7 14957143 14960831 + Kptn protein_coding retained_intron MGP_NODShiLtJ_T0081365.1 MGP_NODShiLtJ_G0031506.1 mouse_genomes_project 7 14957375 14957888 + Kptn protein_coding retained_intron MGP_NODShiLtJ_T0081366.1 MGP_NODShiLtJ_G0031506.1 mouse_genomes_project 7 14959781 14960794 + Kptn protein_coding retained_intron MGP_NODShiLtJ_T0081367.1 MGP_NODShiLtJ_G0031506.1 mouse_genomes_project 7 14959848 14960973 + Kptn protein_coding retained_intron MGP_NODShiLtJ_T0081368.1 MGP_NODShiLtJ_G0031506.1 mouse_genomes_project 7 14962380 14964347 + Kptn protein_coding retained_intron MGP_NODShiLtJ_T0081543.1 MGP_NODShiLtJ_G0031563.1 mouse_genomes_project 7 18402744 18429549 + MGP_NODShiLtJ_P0081543 Rsph6a protein_coding protein_coding MGP_NODShiLtJ_T0081544.1 MGP_NODShiLtJ_G0031563.1 mouse_genomes_project 7 18402753 18429549 + MGP_NODShiLtJ_P0081544 Rsph6a protein_coding protein_coding MGP_NODShiLtJ_T0081545.1 MGP_NODShiLtJ_G0031563.1 mouse_genomes_project 7 18405497 18418974 + Rsph6a protein_coding processed_transcript MGP_NODShiLtJ_T0015717.1 MGP_NODShiLtJ_G0013825.1 mouse_genomes_project 7 80003048 80004036 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015584.1 MGP_NODShiLtJ_G0013692.1 mouse_genomes_project 7 12744998 12745452 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086559.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143260447 143279589 + MGP_NODShiLtJ_P0086559 protein_coding protein_coding MGP_NODShiLtJ_T0086560.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143260480 143275920 + MGP_NODShiLtJ_P0086560 protein_coding protein_coding MGP_NODShiLtJ_T0086561.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143260481 143268215 + protein_coding retained_intron MGP_NODShiLtJ_T0086562.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143260481 143266101 + protein_coding processed_transcript MGP_NODShiLtJ_T0086563.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143260481 143275917 + protein_coding retained_intron MGP_NODShiLtJ_T0086564.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143260498 143275920 + MGP_NODShiLtJ_P0086564 protein_coding protein_coding MGP_NODShiLtJ_T0086565.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143265746 143268215 + protein_coding retained_intron MGP_NODShiLtJ_T0086566.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143265765 143271159 + protein_coding processed_transcript MGP_NODShiLtJ_T0086567.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143268030 143272115 + protein_coding retained_intron MGP_NODShiLtJ_T0086568.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143268862 143270721 + protein_coding retained_intron MGP_NODShiLtJ_T0086569.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143269571 143274124 + protein_coding retained_intron MGP_NODShiLtJ_T0086570.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143271201 143275337 + MGP_NODShiLtJ_P0086570 protein_coding protein_coding MGP_NODShiLtJ_T0086571.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143272019 143274074 + protein_coding retained_intron MGP_NODShiLtJ_T0086572.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143274071 143275895 + MGP_NODShiLtJ_P0086572 protein_coding protein_coding MGP_NODShiLtJ_T0086573.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143274103 143275717 + protein_coding retained_intron MGP_NODShiLtJ_T0086574.1 MGP_NODShiLtJ_G0032875.1 mouse_genomes_project 7 143276966 143279589 + MGP_NODShiLtJ_P0086574 protein_coding protein_coding MGP_NODShiLtJ_T0086300.1 MGP_NODShiLtJ_G0032823.1 mouse_genomes_project 7 142187361 142189663 - MGP_NODShiLtJ_P0086300 protein_coding protein_coding MGP_NODShiLtJ_T0086301.1 MGP_NODShiLtJ_G0032823.1 mouse_genomes_project 7 142187375 142192638 - protein_coding retained_intron MGP_NODShiLtJ_T0086305.1 MGP_NODShiLtJ_G0032823.1 mouse_genomes_project 7 142188541 142193408 - protein_coding processed_transcript MGP_NODShiLtJ_T0086306.1 MGP_NODShiLtJ_G0032823.1 mouse_genomes_project 7 142188544 142193350 - MGP_NODShiLtJ_P0086306 protein_coding protein_coding MGP_NODShiLtJ_T0086307.1 MGP_NODShiLtJ_G0032823.1 mouse_genomes_project 7 142189081 142193400 - protein_coding processed_transcript MGP_NODShiLtJ_T0082662.1 MGP_NODShiLtJ_G0031854.1 mouse_genomes_project 7 31376936 31386712 + Atp4a protein_coding retained_intron MGP_NODShiLtJ_T0082663.1 MGP_NODShiLtJ_G0031854.1 mouse_genomes_project 7 31376936 31391407 + MGP_NODShiLtJ_P0082663 Atp4a protein_coding protein_coding MGP_NODShiLtJ_T0082664.1 MGP_NODShiLtJ_G0031854.1 mouse_genomes_project 7 31376959 31391406 + MGP_NODShiLtJ_P0082664 Atp4a protein_coding protein_coding MGP_NODShiLtJ_T0082665.1 MGP_NODShiLtJ_G0031854.1 mouse_genomes_project 7 31382556 31386461 + MGP_NODShiLtJ_P0082665 Atp4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082666.1 MGP_NODShiLtJ_G0031854.1 mouse_genomes_project 7 31388242 31391063 + Atp4a protein_coding retained_intron MGP_NODShiLtJ_T0010775.1 MGP_NODShiLtJ_G0008908.1 mouse_genomes_project 7 67705856 67705925 - Gm22466 miRNA miRNA MGP_NODShiLtJ_T0008957.1 MGP_NODShiLtJ_G0007203.1 mouse_genomes_project 7 144186039 144339140 + Gm44671 lincRNA lincRNA MGP_NODShiLtJ_T0002216.1 MGP_NODShiLtJ_G0002127.1 mouse_genomes_project 7 83245969 83247267 + TEC TEC MGP_NODShiLtJ_T0102202.1 MGP_NODShiLtJ_G0040368.1 mouse_genomes_project 7 116437439 116438393 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008909.1 MGP_NODShiLtJ_G0007174.1 mouse_genomes_project 7 129013582 129016811 - Gm45017 lincRNA lincRNA MGP_NODShiLtJ_T0085586.1 MGP_NODShiLtJ_G0032680.1 mouse_genomes_project 7 126885411 126888906 + MGP_NODShiLtJ_P0085586 Rassf10 protein_coding protein_coding MGP_NODShiLtJ_T0085490.1 MGP_NODShiLtJ_G0032664.1 mouse_genomes_project 7 123917848 123981006 + MGP_NODShiLtJ_P0085490 Swap70 protein_coding protein_coding MGP_NODShiLtJ_T0085186.1 MGP_NODShiLtJ_G0032516.1 mouse_genomes_project 7 116942007 116960104 - MGP_NODShiLtJ_P0085186 protein_coding protein_coding MGP_NODShiLtJ_T0102195.1 MGP_NODShiLtJ_G0040361.1 mouse_genomes_project 7 115382913 115383769 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015664.1 MGP_NODShiLtJ_G0013772.1 mouse_genomes_project 7 43223910 43231570 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081139.1 MGP_NODShiLtJ_G0031409.1 mouse_genomes_project 7 3624538 3655719 + MGP_NODShiLtJ_P0081139 Gm6792 protein_coding protein_coding MGP_NODShiLtJ_T0081140.1 MGP_NODShiLtJ_G0031409.1 mouse_genomes_project 7 3630253 3655926 + Gm6792 protein_coding processed_transcript MGP_NODShiLtJ_T0081141.1 MGP_NODShiLtJ_G0031409.1 mouse_genomes_project 7 3633170 3655719 + MGP_NODShiLtJ_P0081141 Gm6792 protein_coding protein_coding MGP_NODShiLtJ_T0084493.1 MGP_NODShiLtJ_G0032272.1 mouse_genomes_project 7 92656573 92699102 - MGP_NODShiLtJ_P0084493 Abhd17c protein_coding protein_coding MGP_NODShiLtJ_T0084494.1 MGP_NODShiLtJ_G0032272.1 mouse_genomes_project 7 92661444 92695025 - Abhd17c protein_coding processed_transcript MGP_NODShiLtJ_T0084418.1 MGP_NODShiLtJ_G0032251.1 mouse_genomes_project 7 90114173 90122531 - MGP_NODShiLtJ_P0084418 3110040N11Rik protein_coding protein_coding MGP_NODShiLtJ_T0084419.1 MGP_NODShiLtJ_G0032251.1 mouse_genomes_project 7 90115235 90122554 - 3110040N11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0084420.1 MGP_NODShiLtJ_G0032251.1 mouse_genomes_project 7 90115235 90121749 - 3110040N11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0084421.1 MGP_NODShiLtJ_G0032251.1 mouse_genomes_project 7 90115254 90122194 - 3110040N11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0084422.1 MGP_NODShiLtJ_G0032251.1 mouse_genomes_project 7 90115308 90122550 - MGP_NODShiLtJ_P0084422 3110040N11Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002151.1 MGP_NODShiLtJ_G0002063.1 mouse_genomes_project 7 16011066 16011970 + TEC TEC MGP_NODShiLtJ_T0084012.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74324748 74353014 + Ttc23 protein_coding retained_intron MGP_NODShiLtJ_T0084013.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74324748 74411399 + MGP_NODShiLtJ_P0084013 Ttc23 protein_coding protein_coding MGP_NODShiLtJ_T0084014.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74324763 74411401 + MGP_NODShiLtJ_P0084014 Ttc23 protein_coding protein_coding MGP_NODShiLtJ_T0084015.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74324788 74411401 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0084016.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74324792 74326534 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0084017.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74324798 74339466 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0084018.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74326496 74362338 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0084019.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74332539 74362588 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0084020.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74332809 74411398 + MGP_NODShiLtJ_P0084020 Ttc23 protein_coding protein_coding MGP_NODShiLtJ_T0084021.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74339600 74415026 + MGP_NODShiLtJ_P0084021 Ttc23 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084022.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74345633 74350420 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0084023.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74350438 74382099 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0084024.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74362561 74410877 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0084025.1 MGP_NODShiLtJ_G0032177.1 mouse_genomes_project 7 74410085 74410839 + Ttc23 protein_coding processed_transcript MGP_NODShiLtJ_T0010771.1 MGP_NODShiLtJ_G0008904.1 mouse_genomes_project 7 67676639 67676719 - Gm23962 miRNA miRNA MGP_NODShiLtJ_T0102123.1 MGP_NODShiLtJ_G0040289.1 mouse_genomes_project 7 34982264 34990676 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008865.1 MGP_NODShiLtJ_G0007147.1 mouse_genomes_project 7 87693619 87699447 - Gm45169 lincRNA lincRNA MGP_NODShiLtJ_T0084636.1 MGP_NODShiLtJ_G0032326.1 mouse_genomes_project 7 108571663 108689897 + MGP_NODShiLtJ_P0084636 Nars2 protein_coding protein_coding MGP_NODShiLtJ_T0084637.1 MGP_NODShiLtJ_G0032326.1 mouse_genomes_project 7 108571679 108627404 + Nars2 protein_coding processed_transcript MGP_NODShiLtJ_T0084638.1 MGP_NODShiLtJ_G0032326.1 mouse_genomes_project 7 108571720 108665800 + MGP_NODShiLtJ_P0084638 Nars2 protein_coding protein_coding MGP_NODShiLtJ_T0084639.1 MGP_NODShiLtJ_G0032326.1 mouse_genomes_project 7 108648603 108688081 + MGP_NODShiLtJ_P0084639 Nars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084640.1 MGP_NODShiLtJ_G0032326.1 mouse_genomes_project 7 108665162 108688111 + MGP_NODShiLtJ_P0084640 Nars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081339.1 MGP_NODShiLtJ_G0031497.1 mouse_genomes_project 7 14617234 14622842 - MGP_NODShiLtJ_P0081339 Obox6 protein_coding protein_coding MGP_NODShiLtJ_T0084450.1 MGP_NODShiLtJ_G0032259.1 mouse_genomes_project 7 91037376 91054909 - MGP_NODShiLtJ_P0084450 Saxo2 protein_coding protein_coding MGP_NODShiLtJ_T0084451.1 MGP_NODShiLtJ_G0032259.1 mouse_genomes_project 7 91037519 91054815 - MGP_NODShiLtJ_P0084451 Saxo2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084452.1 MGP_NODShiLtJ_G0032259.1 mouse_genomes_project 7 91039657 91054909 - Saxo2 protein_coding processed_transcript MGP_NODShiLtJ_T0084453.1 MGP_NODShiLtJ_G0032259.1 mouse_genomes_project 7 91047995 91054914 - Saxo2 protein_coding retained_intron MGP_NODShiLtJ_T0084454.1 MGP_NODShiLtJ_G0032259.1 mouse_genomes_project 7 91052022 91054914 - Saxo2 protein_coding processed_transcript MGP_NODShiLtJ_T0015780.1 MGP_NODShiLtJ_G0013888.1 mouse_genomes_project 7 129355163 129355497 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002256.1 MGP_NODShiLtJ_G0002167.1 mouse_genomes_project 7 140366711 140367871 + TEC TEC MGP_NODShiLtJ_T0081981.1 MGP_NODShiLtJ_G0031687.1 mouse_genomes_project 7 25589268 25598129 + MGP_NODShiLtJ_P0081981 Exosc5 protein_coding protein_coding MGP_NODShiLtJ_T0081982.1 MGP_NODShiLtJ_G0031687.1 mouse_genomes_project 7 25589295 25601448 + MGP_NODShiLtJ_P0081982 Exosc5 protein_coding protein_coding MGP_NODShiLtJ_T0081983.1 MGP_NODShiLtJ_G0031687.1 mouse_genomes_project 7 25589316 25598129 + Exosc5 protein_coding retained_intron MGP_NODShiLtJ_T0081984.1 MGP_NODShiLtJ_G0031687.1 mouse_genomes_project 7 25589316 25596413 + MGP_NODShiLtJ_P0081984 Exosc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081985.1 MGP_NODShiLtJ_G0031687.1 mouse_genomes_project 7 25589322 25594508 + MGP_NODShiLtJ_P0081985 Exosc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081986.1 MGP_NODShiLtJ_G0031687.1 mouse_genomes_project 7 25594493 25596881 + Exosc5 protein_coding retained_intron MGP_NODShiLtJ_T0100738.1 MGP_NODShiLtJ_G0039132.1 mouse_genomes_project 7 47906932 47907002 - Snord34 snoRNA snoRNA MGP_NODShiLtJ_T0102081.1 MGP_NODShiLtJ_G0040248.1 mouse_genomes_project 7 11510217 11510418 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084222.1 MGP_NODShiLtJ_G0032218.1 mouse_genomes_project 7 88193912 88259967 + MGP_NODShiLtJ_P0084222 Zfp710 protein_coding protein_coding MGP_NODShiLtJ_T0084223.1 MGP_NODShiLtJ_G0032218.1 mouse_genomes_project 7 88195205 88254264 + MGP_NODShiLtJ_P0084223 Zfp710 protein_coding protein_coding MGP_NODShiLtJ_T0084224.1 MGP_NODShiLtJ_G0032218.1 mouse_genomes_project 7 88253627 88263639 + MGP_NODShiLtJ_P0084224 Zfp710 protein_coding protein_coding MGP_NODShiLtJ_T0081782.1 MGP_NODShiLtJ_G0031638.1 mouse_genomes_project 7 24053325 24054180 - MGP_NODShiLtJ_P0081782 Tescl protein_coding protein_coding MGP_NODShiLtJ_T0099474.1 MGP_NODShiLtJ_G0037868.1 mouse_genomes_project 7 15512727 15512830 - Gm24708 snRNA snRNA MGP_NODShiLtJ_T0008825.1 MGP_NODShiLtJ_G0007119.1 mouse_genomes_project 7 79131400 79166945 + 4930441H08Rik lincRNA lincRNA MGP_NODShiLtJ_T0086105.1 MGP_NODShiLtJ_G0032793.1 mouse_genomes_project 7 141678633 141698443 - MGP_NODShiLtJ_P0086105 Eif3c protein_coding protein_coding MGP_NODShiLtJ_T0086106.1 MGP_NODShiLtJ_G0032793.1 mouse_genomes_project 7 141694652 141698390 - MGP_NODShiLtJ_P0086106 Eif3c protein_coding protein_coding MGP_NODShiLtJ_T0086107.1 MGP_NODShiLtJ_G0032793.1 mouse_genomes_project 7 141695067 141698236 - MGP_NODShiLtJ_P0086107 Eif3c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015581.1 MGP_NODShiLtJ_G0013689.1 mouse_genomes_project 7 11960845 11963622 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010828.1 MGP_NODShiLtJ_G0008961.1 mouse_genomes_project 7 157541624 157541734 - Mir210 miRNA miRNA MGP_NODShiLtJ_T0083383.1 MGP_NODShiLtJ_G0032025.1 mouse_genomes_project 7 47967983 47990382 - MGP_NODShiLtJ_P0083383 Ccdc155 protein_coding protein_coding MGP_NODShiLtJ_T0083384.1 MGP_NODShiLtJ_G0032025.1 mouse_genomes_project 7 47968109 47985893 - MGP_NODShiLtJ_P0083384 Ccdc155 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083385.1 MGP_NODShiLtJ_G0032025.1 mouse_genomes_project 7 47968287 47974462 - Ccdc155 protein_coding retained_intron MGP_NODShiLtJ_T0085352.1 MGP_NODShiLtJ_G0032580.1 mouse_genomes_project 7 119985535 119986486 - MGP_NODShiLtJ_P0085352 Olfr699 protein_coding protein_coding MGP_NODShiLtJ_T0085417.1 MGP_NODShiLtJ_G0032637.1 mouse_genomes_project 7 122336891 122337827 + MGP_NODShiLtJ_P0085417 Olfr513 protein_coding protein_coding MGP_NODShiLtJ_T0008745.1 MGP_NODShiLtJ_G0007058.1 mouse_genomes_project 7 30833108 30835371 + lincRNA lincRNA MGP_NODShiLtJ_T0002188.1 MGP_NODShiLtJ_G0002100.1 mouse_genomes_project 7 60876248 60877987 - TEC TEC MGP_NODShiLtJ_T0018219.1 MGP_NODShiLtJ_G0015540.1 mouse_genomes_project 7 70289493 70292658 + Gm27252 processed_transcript lincRNA MGP_NODShiLtJ_T0018220.1 MGP_NODShiLtJ_G0015540.1 mouse_genomes_project 7 70290934 70292489 + Gm27252 processed_transcript antisense MGP_NODShiLtJ_T0008854.1 MGP_NODShiLtJ_G0007143.1 mouse_genomes_project 7 86904885 86908565 - Gm44730 lincRNA lincRNA MGP_NODShiLtJ_T0085128.1 MGP_NODShiLtJ_G0032469.1 mouse_genomes_project 7 115731534 115732485 + MGP_NODShiLtJ_P0085128 Olfr608 protein_coding protein_coding MGP_NODShiLtJ_T0083664.1 MGP_NODShiLtJ_G0032092.1 mouse_genomes_project 7 49816297 49834744 + MGP_NODShiLtJ_P0083664 Ldhc protein_coding protein_coding MGP_NODShiLtJ_T0083665.1 MGP_NODShiLtJ_G0032092.1 mouse_genomes_project 7 49816416 49832390 + MGP_NODShiLtJ_P0083665 Ldhc protein_coding protein_coding MGP_NODShiLtJ_T0083666.1 MGP_NODShiLtJ_G0032092.1 mouse_genomes_project 7 49817137 49833076 + MGP_NODShiLtJ_P0083666 Ldhc protein_coding protein_coding MGP_NODShiLtJ_T0100784.1 MGP_NODShiLtJ_G0039178.1 mouse_genomes_project 7 151011489 151011622 - Gm24581 snoRNA snoRNA MGP_NODShiLtJ_T0081457.1 MGP_NODShiLtJ_G0031527.1 mouse_genomes_project 7 15793792 15807082 + MGP_NODShiLtJ_P0081457 Dact3 protein_coding protein_coding MGP_NODShiLtJ_T0015687.1 MGP_NODShiLtJ_G0013795.1 mouse_genomes_project 7 46965714 46966663 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084480.1 MGP_NODShiLtJ_G0032268.1 mouse_genomes_project 7 92296955 92320829 - MGP_NODShiLtJ_P0084480 Cfap161 protein_coding protein_coding MGP_NODShiLtJ_T0084481.1 MGP_NODShiLtJ_G0032268.1 mouse_genomes_project 7 92298475 92320890 - MGP_NODShiLtJ_P0084481 Cfap161 protein_coding protein_coding MGP_NODShiLtJ_T0084482.1 MGP_NODShiLtJ_G0032268.1 mouse_genomes_project 7 92311599 92320181 - MGP_NODShiLtJ_P0084482 Cfap161 protein_coding protein_coding MGP_NODShiLtJ_T0081670.1 MGP_NODShiLtJ_G0031596.1 mouse_genomes_project 7 19039105 19076253 - MGP_NODShiLtJ_P0081670 Clptm1 protein_coding protein_coding MGP_NODShiLtJ_T0081199.1 MGP_NODShiLtJ_G0031443.1 mouse_genomes_project 7 9864300 9865198 + MGP_NODShiLtJ_P0081199 Vmn1r74 protein_coding protein_coding MGP_NODShiLtJ_T0087040.1 MGP_NODShiLtJ_G0032998.1 mouse_genomes_project 7 157076528 157092150 - MGP_NODShiLtJ_P0087040 Zfp941 protein_coding protein_coding MGP_NODShiLtJ_T0087041.1 MGP_NODShiLtJ_G0032998.1 mouse_genomes_project 7 157078768 157092104 - MGP_NODShiLtJ_P0087041 Zfp941 protein_coding protein_coding MGP_NODShiLtJ_T0087042.1 MGP_NODShiLtJ_G0032998.1 mouse_genomes_project 7 157088435 157092118 - Zfp941 protein_coding processed_transcript MGP_NODShiLtJ_T0008895.1 MGP_NODShiLtJ_G0007166.1 mouse_genomes_project 7 111445480 111448678 + Gm10605 lincRNA lincRNA MGP_NODShiLtJ_T0008896.1 MGP_NODShiLtJ_G0007166.1 mouse_genomes_project 7 111445683 111451235 + Gm10605 lincRNA lincRNA MGP_NODShiLtJ_T0085377.1 MGP_NODShiLtJ_G0032603.1 mouse_genomes_project 7 120691600 120764524 + MGP_NODShiLtJ_P0085377 Syt9 protein_coding protein_coding MGP_NODShiLtJ_T0085378.1 MGP_NODShiLtJ_G0032603.1 mouse_genomes_project 7 120691662 120885919 + MGP_NODShiLtJ_P0085378 Syt9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085379.1 MGP_NODShiLtJ_G0032603.1 mouse_genomes_project 7 120691662 120885922 + MGP_NODShiLtJ_P0085379 Syt9 protein_coding protein_coding MGP_NODShiLtJ_T0085380.1 MGP_NODShiLtJ_G0032603.1 mouse_genomes_project 7 120837003 120885919 + Syt9 protein_coding retained_intron MGP_NODShiLtJ_T0085381.1 MGP_NODShiLtJ_G0032603.1 mouse_genomes_project 7 120837037 120885919 + Syt9 protein_coding retained_intron MGP_NODShiLtJ_T0084866.1 MGP_NODShiLtJ_G0032380.1 mouse_genomes_project 7 112462658 112465935 + MGP_NODShiLtJ_P0084866 Coa4 protein_coding protein_coding MGP_NODShiLtJ_T0084867.1 MGP_NODShiLtJ_G0032380.1 mouse_genomes_project 7 112462790 112465038 + MGP_NODShiLtJ_P0084867 Coa4 protein_coding protein_coding MGP_NODShiLtJ_T0008721.1 MGP_NODShiLtJ_G0007037.1 mouse_genomes_project 7 516478 530343 - Gm44920 lincRNA lincRNA MGP_NODShiLtJ_T0085995.1 MGP_NODShiLtJ_G0032774.1 mouse_genomes_project 7 140501758 140519584 + MGP_NODShiLtJ_P0085995 Kdm8 protein_coding protein_coding MGP_NODShiLtJ_T0085996.1 MGP_NODShiLtJ_G0032774.1 mouse_genomes_project 7 140501766 140517336 + MGP_NODShiLtJ_P0085996 Kdm8 protein_coding protein_coding MGP_NODShiLtJ_T0084720.1 MGP_NODShiLtJ_G0032342.1 mouse_genomes_project 7 109854312 109912985 - MGP_NODShiLtJ_P0084720 Capn5 protein_coding protein_coding MGP_NODShiLtJ_T0084721.1 MGP_NODShiLtJ_G0032342.1 mouse_genomes_project 7 109856414 109896055 - MGP_NODShiLtJ_P0084721 Capn5 protein_coding protein_coding MGP_NODShiLtJ_T0084723.1 MGP_NODShiLtJ_G0032342.1 mouse_genomes_project 7 109879347 109895923 - Capn5 protein_coding processed_transcript MGP_NODShiLtJ_T0084724.1 MGP_NODShiLtJ_G0032342.1 mouse_genomes_project 7 109895693 109898587 - MGP_NODShiLtJ_P0084724 Capn5 protein_coding protein_coding MGP_NODShiLtJ_T0084725.1 MGP_NODShiLtJ_G0032342.1 mouse_genomes_project 7 109895710 109899066 - MGP_NODShiLtJ_P0084725 Capn5 protein_coding protein_coding MGP_NODShiLtJ_T0085376.1 MGP_NODShiLtJ_G0032602.1 mouse_genomes_project 7 120543739 120545265 + MGP_NODShiLtJ_P0085376 Rbmxl2 protein_coding protein_coding MGP_NODShiLtJ_T0081767.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24007142 24017655 - MGP_NODShiLtJ_P0081767 Zfp61 protein_coding protein_coding MGP_NODShiLtJ_T0081768.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24007160 24013884 - MGP_NODShiLtJ_P0081768 Zfp61 protein_coding protein_coding MGP_NODShiLtJ_T0081769.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24008122 24013614 - Zfp61 protein_coding processed_transcript MGP_NODShiLtJ_T0081770.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24008265 24017290 - MGP_NODShiLtJ_P0081770 Zfp61 protein_coding protein_coding MGP_NODShiLtJ_T0081771.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24009462 24013451 - Zfp61 protein_coding retained_intron MGP_NODShiLtJ_T0081772.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24012973 24017278 - Zfp61 protein_coding processed_transcript MGP_NODShiLtJ_T0081773.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24013216 24017381 - Zfp61 protein_coding retained_intron MGP_NODShiLtJ_T0081774.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24015615 24020963 - Zfp61 protein_coding processed_transcript MGP_NODShiLtJ_T0081775.1 MGP_NODShiLtJ_G0031636.1 mouse_genomes_project 7 24016078 24017617 - Zfp61 protein_coding retained_intron MGP_NODShiLtJ_T0087546.1 MGP_NODShiLtJ_G0033103.1 mouse_genomes_project 7 161969816 161981201 + MGP_NODShiLtJ_P0087546 Mrgprf protein_coding protein_coding MGP_NODShiLtJ_T0087547.1 MGP_NODShiLtJ_G0033103.1 mouse_genomes_project 7 161969887 161980993 + MGP_NODShiLtJ_P0087547 Mrgprf protein_coding protein_coding MGP_NODShiLtJ_T0081694.1 MGP_NODShiLtJ_G0031602.1 mouse_genomes_project 7 19129648 19168399 - MGP_NODShiLtJ_P0081694 Nectin2 protein_coding protein_coding MGP_NODShiLtJ_T0081695.1 MGP_NODShiLtJ_G0031602.1 mouse_genomes_project 7 19137262 19168399 - MGP_NODShiLtJ_P0081695 Nectin2 protein_coding protein_coding MGP_NODShiLtJ_T0100773.1 MGP_NODShiLtJ_G0039167.1 mouse_genomes_project 7 124867988 124868156 - Gm23262 snoRNA snoRNA MGP_NODShiLtJ_T0084044.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80768435 80887704 - MGP_NODShiLtJ_P0084044 Chd2 protein_coding protein_coding MGP_NODShiLtJ_T0084045.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80768491 80809136 - MGP_NODShiLtJ_P0084045 Chd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084046.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80771785 80788057 - MGP_NODShiLtJ_P0084046 Chd2 protein_coding protein_coding MGP_NODShiLtJ_T0084047.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80790067 80796416 - MGP_NODShiLtJ_P0084047 Chd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084048.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80792636 80802562 - Chd2 protein_coding processed_transcript MGP_NODShiLtJ_T0084049.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80815203 80821630 - Chd2 protein_coding processed_transcript MGP_NODShiLtJ_T0084050.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80815209 80821632 - MGP_NODShiLtJ_P0084050 Chd2 protein_coding protein_coding MGP_NODShiLtJ_T0084051.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80815210 80819456 - Chd2 protein_coding retained_intron MGP_NODShiLtJ_T0084052.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80841729 80846140 - MGP_NODShiLtJ_P0084052 Chd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084053.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80843664 80846059 - MGP_NODShiLtJ_P0084053 Chd2 protein_coding protein_coding MGP_NODShiLtJ_T0084054.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80845002 80887703 - MGP_NODShiLtJ_P0084054 Chd2 protein_coding protein_coding MGP_NODShiLtJ_T0084055.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80845960 80847591 - Chd2 protein_coding retained_intron MGP_NODShiLtJ_T0084056.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80851885 80882160 - MGP_NODShiLtJ_P0084056 Chd2 protein_coding protein_coding MGP_NODShiLtJ_T0084057.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80851915 80887694 - MGP_NODShiLtJ_P0084057 Chd2 protein_coding protein_coding MGP_NODShiLtJ_T0084058.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80882628 80887788 - Chd2 protein_coding retained_intron MGP_NODShiLtJ_T0084059.1 MGP_NODShiLtJ_G0032186.1 mouse_genomes_project 7 80883892 80887704 - Chd2 protein_coding processed_transcript MGP_NODShiLtJ_T0015599.1 MGP_NODShiLtJ_G0013707.1 mouse_genomes_project 7 17384319 17385831 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082919.1 MGP_NODShiLtJ_G0031904.1 mouse_genomes_project 7 36648006 36652807 - MGP_NODShiLtJ_P0082919 Faap24 protein_coding protein_coding MGP_NODShiLtJ_T0082920.1 MGP_NODShiLtJ_G0031904.1 mouse_genomes_project 7 36648159 36652684 - Faap24 protein_coding retained_intron MGP_NODShiLtJ_T0082921.1 MGP_NODShiLtJ_G0031904.1 mouse_genomes_project 7 36648550 36652679 - MGP_NODShiLtJ_P0082921 Faap24 protein_coding protein_coding MGP_NODShiLtJ_T0008965.1 MGP_NODShiLtJ_G0007210.1 mouse_genomes_project 7 146746606 146750748 + 1700029B22Rik lincRNA lincRNA MGP_NODShiLtJ_T0008966.1 MGP_NODShiLtJ_G0007210.1 mouse_genomes_project 7 146746611 146750748 + 1700029B22Rik lincRNA lincRNA MGP_NODShiLtJ_T0008967.1 MGP_NODShiLtJ_G0007210.1 mouse_genomes_project 7 146746649 146750726 + 1700029B22Rik lincRNA lincRNA MGP_NODShiLtJ_T0015697.1 MGP_NODShiLtJ_G0013805.1 mouse_genomes_project 7 60351146 60351692 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086388.1 MGP_NODShiLtJ_G0032842.1 mouse_genomes_project 7 142602127 142607776 - MGP_NODShiLtJ_P0086388 9130019O22Rik protein_coding protein_coding MGP_NODShiLtJ_T0084780.1 MGP_NODShiLtJ_G0032358.1 mouse_genomes_project 7 111271074 111279058 + MGP_NODShiLtJ_P0084780 Klhl35 protein_coding protein_coding MGP_NODShiLtJ_T0084781.1 MGP_NODShiLtJ_G0032358.1 mouse_genomes_project 7 111274001 111276822 + MGP_NODShiLtJ_P0084781 Klhl35 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084782.1 MGP_NODShiLtJ_G0032358.1 mouse_genomes_project 7 111274990 111276909 + Klhl35 protein_coding retained_intron MGP_NODShiLtJ_T0084783.1 MGP_NODShiLtJ_G0032358.1 mouse_genomes_project 7 111276861 111278640 + MGP_NODShiLtJ_P0084783 Klhl35 protein_coding protein_coding MGP_NODShiLtJ_T0087245.1 MGP_NODShiLtJ_G0033039.1 mouse_genomes_project 7 157792230 157797784 + MGP_NODShiLtJ_P0087245 Pnpla2 protein_coding protein_coding MGP_NODShiLtJ_T0087246.1 MGP_NODShiLtJ_G0033039.1 mouse_genomes_project 7 157792238 157797133 + MGP_NODShiLtJ_P0087246 Pnpla2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087247.1 MGP_NODShiLtJ_G0033039.1 mouse_genomes_project 7 157792239 157797135 + MGP_NODShiLtJ_P0087247 Pnpla2 protein_coding protein_coding MGP_NODShiLtJ_T0087248.1 MGP_NODShiLtJ_G0033039.1 mouse_genomes_project 7 157792251 157795979 + MGP_NODShiLtJ_P0087248 Pnpla2 protein_coding protein_coding MGP_NODShiLtJ_T0087249.1 MGP_NODShiLtJ_G0033039.1 mouse_genomes_project 7 157792261 157797144 + MGP_NODShiLtJ_P0087249 Pnpla2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087250.1 MGP_NODShiLtJ_G0033039.1 mouse_genomes_project 7 157792639 157795184 + MGP_NODShiLtJ_P0087250 Pnpla2 protein_coding protein_coding MGP_NODShiLtJ_T0087251.1 MGP_NODShiLtJ_G0033039.1 mouse_genomes_project 7 157794050 157795727 + MGP_NODShiLtJ_P0087251 Pnpla2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015674.1 MGP_NODShiLtJ_G0013782.1 mouse_genomes_project 7 44853225 44854960 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080823.1 MGP_NODShiLtJ_G0031328.1 mouse_genomes_project 7 258834 302929 + MGP_NODShiLtJ_P0080823 Cacng7 protein_coding protein_coding MGP_NODShiLtJ_T0080824.1 MGP_NODShiLtJ_G0031328.1 mouse_genomes_project 7 264077 299859 + Cacng7 protein_coding retained_intron MGP_NODShiLtJ_T0002179.1 MGP_NODShiLtJ_G0002091.1 mouse_genomes_project 7 47003105 47003262 + TEC TEC MGP_NODShiLtJ_T0085125.1 MGP_NODShiLtJ_G0032466.1 mouse_genomes_project 7 115696728 115697673 - MGP_NODShiLtJ_P0085125 protein_coding protein_coding MGP_NODShiLtJ_T0083016.1 MGP_NODShiLtJ_G0031919.1 mouse_genomes_project 7 39767667 39778589 - MGP_NODShiLtJ_P0083016 Plekhf1 protein_coding protein_coding MGP_NODShiLtJ_T0086948.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155722025 155739927 - MGP_NODShiLtJ_P0086948 protein_coding protein_coding MGP_NODShiLtJ_T0086949.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155722025 155728990 - MGP_NODShiLtJ_P0086949 protein_coding protein_coding MGP_NODShiLtJ_T0086950.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155722025 155815063 - MGP_NODShiLtJ_P0086950 protein_coding protein_coding MGP_NODShiLtJ_T0086951.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155722154 155739907 - protein_coding retained_intron MGP_NODShiLtJ_T0086952.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155735573 155739927 - protein_coding retained_intron MGP_NODShiLtJ_T0086953.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155764930 155815063 - MGP_NODShiLtJ_P0086953 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086954.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155764930 155788046 - MGP_NODShiLtJ_P0086954 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086955.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155771879 155815063 - protein_coding retained_intron MGP_NODShiLtJ_T0086956.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155805726 155815063 - MGP_NODShiLtJ_P0086956 protein_coding protein_coding MGP_NODShiLtJ_T0086957.1 MGP_NODShiLtJ_G0032959.1 mouse_genomes_project 7 155809514 155815063 - protein_coding retained_intron MGP_NODShiLtJ_T0099496.1 MGP_NODShiLtJ_G0037890.1 mouse_genomes_project 7 83205302 83205386 + Gm25282 snRNA snRNA MGP_NODShiLtJ_T0085349.1 MGP_NODShiLtJ_G0032577.1 mouse_genomes_project 7 119902459 119905551 - MGP_NODShiLtJ_P0085349 protein_coding protein_coding MGP_NODShiLtJ_T0082277.1 MGP_NODShiLtJ_G0031768.1 mouse_genomes_project 7 29057000 29084337 - MGP_NODShiLtJ_P0082277 Acp7 protein_coding protein_coding MGP_NODShiLtJ_T0082278.1 MGP_NODShiLtJ_G0031768.1 mouse_genomes_project 7 29065895 29083777 - Acp7 protein_coding processed_transcript MGP_NODShiLtJ_T0082279.1 MGP_NODShiLtJ_G0031768.1 mouse_genomes_project 7 29066384 29083777 - Acp7 protein_coding processed_transcript MGP_NODShiLtJ_T0082280.1 MGP_NODShiLtJ_G0031768.1 mouse_genomes_project 7 29082760 29083770 - Acp7 protein_coding processed_transcript MGP_NODShiLtJ_T0082281.1 MGP_NODShiLtJ_G0031768.1 mouse_genomes_project 7 29082793 29084602 - Acp7 protein_coding processed_transcript MGP_NODShiLtJ_T0010719.1 MGP_NODShiLtJ_G0008852.1 mouse_genomes_project 7 132405 132487 + Mir292 miRNA miRNA MGP_NODShiLtJ_T0015750.1 MGP_NODShiLtJ_G0013858.1 mouse_genomes_project 7 106969592 106971040 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015641.1 MGP_NODShiLtJ_G0013749.1 mouse_genomes_project 7 34436595 34436730 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008781.1 MGP_NODShiLtJ_G0007087.1 mouse_genomes_project 7 42405106 42413701 + 4933402C06Rik lincRNA lincRNA MGP_NODShiLtJ_T0008782.1 MGP_NODShiLtJ_G0007087.1 mouse_genomes_project 7 42405106 42422826 + 4933402C06Rik lincRNA lincRNA MGP_NODShiLtJ_T0081449.1 MGP_NODShiLtJ_G0031526.1 mouse_genomes_project 7 15757079 15788842 + MGP_NODShiLtJ_P0081449 Prkd2 protein_coding protein_coding MGP_NODShiLtJ_T0081450.1 MGP_NODShiLtJ_G0031526.1 mouse_genomes_project 7 15757242 15788937 + MGP_NODShiLtJ_P0081450 Prkd2 protein_coding protein_coding MGP_NODShiLtJ_T0081451.1 MGP_NODShiLtJ_G0031526.1 mouse_genomes_project 7 15758338 15763641 + Prkd2 protein_coding processed_transcript MGP_NODShiLtJ_T0081452.1 MGP_NODShiLtJ_G0031526.1 mouse_genomes_project 7 15759408 15761745 + Prkd2 protein_coding processed_transcript MGP_NODShiLtJ_T0081453.1 MGP_NODShiLtJ_G0031526.1 mouse_genomes_project 7 15759975 15765377 + Prkd2 protein_coding retained_intron MGP_NODShiLtJ_T0081454.1 MGP_NODShiLtJ_G0031526.1 mouse_genomes_project 7 15763584 15770148 + Prkd2 protein_coding retained_intron MGP_NODShiLtJ_T0081455.1 MGP_NODShiLtJ_G0031526.1 mouse_genomes_project 7 15781652 15788360 + Prkd2 protein_coding retained_intron MGP_NODShiLtJ_T0081456.1 MGP_NODShiLtJ_G0031526.1 mouse_genomes_project 7 15787721 15788606 + Prkd2 protein_coding retained_intron MGP_NODShiLtJ_T0002184.1 MGP_NODShiLtJ_G0002096.1 mouse_genomes_project 7 59601840 59603378 + TEC TEC MGP_NODShiLtJ_T0102177.1 MGP_NODShiLtJ_G0040343.1 mouse_genomes_project 7 94944377 94944685 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015676.1 MGP_NODShiLtJ_G0013784.1 mouse_genomes_project 7 45407828 45408312 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005185.1 MGP_NODShiLtJ_G0004403.1 mouse_genomes_project 7 88853264 88861618 + Gm15880 antisense antisense MGP_NODShiLtJ_T0015654.1 MGP_NODShiLtJ_G0013762.1 mouse_genomes_project 7 41248926 41249520 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082535.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30960808 30962659 + Syne4 protein_coding processed_transcript MGP_NODShiLtJ_T0082536.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30960817 30965048 + MGP_NODShiLtJ_P0082536 Syne4 protein_coding protein_coding MGP_NODShiLtJ_T0082537.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30960872 30961711 + Syne4 protein_coding retained_intron MGP_NODShiLtJ_T0082538.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30960881 30963093 + MGP_NODShiLtJ_P0082538 Syne4 protein_coding protein_coding MGP_NODShiLtJ_T0082539.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30960886 30962862 + Syne4 protein_coding retained_intron MGP_NODShiLtJ_T0082540.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30960889 30963087 + MGP_NODShiLtJ_P0082540 Syne4 protein_coding protein_coding MGP_NODShiLtJ_T0082541.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30960917 30965048 + MGP_NODShiLtJ_P0082541 Syne4 protein_coding protein_coding MGP_NODShiLtJ_T0082542.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30961151 30962348 + Syne4 protein_coding retained_intron MGP_NODShiLtJ_T0082543.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30961311 30963352 + Syne4 protein_coding retained_intron MGP_NODShiLtJ_T0082544.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30962021 30962869 + Syne4 protein_coding retained_intron MGP_NODShiLtJ_T0082545.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30962773 30965048 + Syne4 protein_coding retained_intron MGP_NODShiLtJ_T0082546.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30962943 30965044 + MGP_NODShiLtJ_P0082546 Syne4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082547.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30962988 30965047 + MGP_NODShiLtJ_P0082547 Syne4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082548.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30962989 30965042 + MGP_NODShiLtJ_P0082548 Syne4 protein_coding protein_coding MGP_NODShiLtJ_T0082549.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30963021 30965046 + MGP_NODShiLtJ_P0082549 Syne4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082550.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30963241 30965042 + Syne4 protein_coding retained_intron MGP_NODShiLtJ_T0082551.1 MGP_NODShiLtJ_G0031827.1 mouse_genomes_project 7 30963767 30965042 + Syne4 protein_coding retained_intron MGP_NODShiLtJ_T0080972.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1561512 1581563 - MGP_NODShiLtJ_P0080972 Ppp1r12c protein_coding protein_coding MGP_NODShiLtJ_T0080973.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1561512 1581882 - MGP_NODShiLtJ_P0080973 Ppp1r12c protein_coding protein_coding MGP_NODShiLtJ_T0080974.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1561515 1564025 - Ppp1r12c protein_coding retained_intron MGP_NODShiLtJ_T0080975.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1561580 1562627 - Ppp1r12c protein_coding processed_transcript MGP_NODShiLtJ_T0080976.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1563626 1564492 - Ppp1r12c protein_coding retained_intron MGP_NODShiLtJ_T0080977.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1563932 1565307 - Ppp1r12c protein_coding retained_intron MGP_NODShiLtJ_T0080978.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1564009 1565701 - Ppp1r12c protein_coding retained_intron MGP_NODShiLtJ_T0080979.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1565198 1565925 - Ppp1r12c protein_coding retained_intron MGP_NODShiLtJ_T0080980.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1566143 1566727 - Ppp1r12c protein_coding retained_intron MGP_NODShiLtJ_T0080981.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1569376 1581866 - Ppp1r12c protein_coding retained_intron MGP_NODShiLtJ_T0080982.1 MGP_NODShiLtJ_G0031357.1 mouse_genomes_project 7 1570015 1581731 - MGP_NODShiLtJ_P0080982 Ppp1r12c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0008793.1 MGP_NODShiLtJ_G0007096.1 mouse_genomes_project 7 48029977 48054195 + lincRNA lincRNA MGP_NODShiLtJ_T0008794.1 MGP_NODShiLtJ_G0007096.1 mouse_genomes_project 7 48054156 48068318 + lincRNA lincRNA MGP_NODShiLtJ_T0085782.1 MGP_NODShiLtJ_G0032724.1 mouse_genomes_project 7 134289292 134295482 - MGP_NODShiLtJ_P0085782 Thumpd1 protein_coding protein_coding MGP_NODShiLtJ_T0087312.1 MGP_NODShiLtJ_G0033052.1 mouse_genomes_project 7 158370676 158424319 - MGP_NODShiLtJ_P0087312 Mob2 protein_coding protein_coding MGP_NODShiLtJ_T0085231.1 MGP_NODShiLtJ_G0032547.1 mouse_genomes_project 7 118042886 118043974 - MGP_NODShiLtJ_P0085231 Olfr684 protein_coding protein_coding MGP_NODShiLtJ_T0008880.1 MGP_NODShiLtJ_G0007153.1 mouse_genomes_project 7 93119642 93164513 + lincRNA lincRNA MGP_NODShiLtJ_T0081352.1 MGP_NODShiLtJ_G0031503.1 mouse_genomes_project 7 14795305 14824236 - MGP_NODShiLtJ_P0081352 Gltscr1 protein_coding protein_coding MGP_NODShiLtJ_T0084868.1 MGP_NODShiLtJ_G0032381.1 mouse_genomes_project 7 112472010 112512871 - MGP_NODShiLtJ_P0084868 protein_coding protein_coding MGP_NODShiLtJ_T0084869.1 MGP_NODShiLtJ_G0032381.1 mouse_genomes_project 7 112472015 112473878 - MGP_NODShiLtJ_P0084869 protein_coding protein_coding MGP_NODShiLtJ_T0084870.1 MGP_NODShiLtJ_G0032381.1 mouse_genomes_project 7 112475496 112503564 - protein_coding processed_transcript MGP_NODShiLtJ_T0084871.1 MGP_NODShiLtJ_G0032381.1 mouse_genomes_project 7 112478440 112522249 - protein_coding processed_transcript MGP_NODShiLtJ_T0084872.1 MGP_NODShiLtJ_G0032381.1 mouse_genomes_project 7 112480419 112535751 - protein_coding processed_transcript MGP_NODShiLtJ_T0084873.1 MGP_NODShiLtJ_G0032381.1 mouse_genomes_project 7 112493057 112512844 - MGP_NODShiLtJ_P0084873 protein_coding protein_coding MGP_NODShiLtJ_T0084874.1 MGP_NODShiLtJ_G0032381.1 mouse_genomes_project 7 112493068 112512879 - protein_coding processed_transcript MGP_NODShiLtJ_T0084875.1 MGP_NODShiLtJ_G0032381.1 mouse_genomes_project 7 112493072 112535448 - protein_coding processed_transcript MGP_NODShiLtJ_T0002243.1 MGP_NODShiLtJ_G0002154.1 mouse_genomes_project 7 131782925 131784826 + TEC TEC MGP_NODShiLtJ_T0008731.1 MGP_NODShiLtJ_G0007045.1 mouse_genomes_project 7 18678143 18680840 - Gm26802 lincRNA lincRNA MGP_NODShiLtJ_T0085253.1 MGP_NODShiLtJ_G0032561.1 mouse_genomes_project 7 118522515 118527943 + MGP_NODShiLtJ_P0085253 Smpd1 protein_coding protein_coding MGP_NODShiLtJ_T0010753.1 MGP_NODShiLtJ_G0008886.1 mouse_genomes_project 7 31210807 31210884 + Gm38670 miRNA miRNA MGP_NODShiLtJ_T0084510.1 MGP_NODShiLtJ_G0032283.1 mouse_genomes_project 7 95668391 95669403 - MGP_NODShiLtJ_P0084510 Olfr307 protein_coding protein_coding MGP_NODShiLtJ_T0081056.1 MGP_NODShiLtJ_G0031371.1 mouse_genomes_project 7 1908090 1913804 - MGP_NODShiLtJ_P0081056 Il11 protein_coding protein_coding MGP_NODShiLtJ_T0081057.1 MGP_NODShiLtJ_G0031371.1 mouse_genomes_project 7 1908892 1918746 - MGP_NODShiLtJ_P0081057 Il11 protein_coding protein_coding MGP_NODShiLtJ_T0085953.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138026038 138069647 + Tnrc6a protein_coding processed_transcript MGP_NODShiLtJ_T0085954.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138026330 138103922 + MGP_NODShiLtJ_P0085954 Tnrc6a protein_coding protein_coding MGP_NODShiLtJ_T0085955.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138026334 138105230 + MGP_NODShiLtJ_P0085955 Tnrc6a protein_coding protein_coding MGP_NODShiLtJ_T0085956.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138026409 138086447 + MGP_NODShiLtJ_P0085956 Tnrc6a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085957.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138077913 138079696 + Tnrc6a protein_coding retained_intron MGP_NODShiLtJ_T0085958.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138079422 138103913 + MGP_NODShiLtJ_P0085958 Tnrc6a protein_coding protein_coding MGP_NODShiLtJ_T0085959.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138080178 138084490 + Tnrc6a protein_coding retained_intron MGP_NODShiLtJ_T0085960.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138080437 138083224 + Tnrc6a protein_coding retained_intron MGP_NODShiLtJ_T0085961.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138081649 138082989 + Tnrc6a protein_coding retained_intron MGP_NODShiLtJ_T0085962.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138083006 138089376 + MGP_NODShiLtJ_P0085962 Tnrc6a protein_coding protein_coding MGP_NODShiLtJ_T0085963.1 MGP_NODShiLtJ_G0032767.1 mouse_genomes_project 7 138088675 138102521 + Tnrc6a protein_coding retained_intron MGP_NODShiLtJ_T0085157.1 MGP_NODShiLtJ_G0032496.1 mouse_genomes_project 7 116416733 116417687 + MGP_NODShiLtJ_P0085157 Olfr632 protein_coding protein_coding MGP_NODShiLtJ_T0015736.1 MGP_NODShiLtJ_G0013844.1 mouse_genomes_project 7 89505037 89505550 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100770.1 MGP_NODShiLtJ_G0039164.1 mouse_genomes_project 7 123153097 123153227 + Gm24888 snoRNA snoRNA MGP_NODShiLtJ_T0084623.1 MGP_NODShiLtJ_G0032324.1 mouse_genomes_project 7 103572775 103598181 - MGP_NODShiLtJ_P0084623 Ddias protein_coding protein_coding MGP_NODShiLtJ_T0002245.1 MGP_NODShiLtJ_G0002156.1 mouse_genomes_project 7 136649210 136650824 - TEC TEC MGP_NODShiLtJ_T0097830.1 MGP_NODShiLtJ_G0036242.1 mouse_genomes_project 7 121796422 121797368 - pseudogene pseudogene MGP_NODShiLtJ_T0086998.1 MGP_NODShiLtJ_G0032971.1 mouse_genomes_project 7 156263900 156276425 - MGP_NODShiLtJ_P0086998 Echs1 protein_coding protein_coding MGP_NODShiLtJ_T0086999.1 MGP_NODShiLtJ_G0032971.1 mouse_genomes_project 7 156263908 156276338 - Echs1 protein_coding retained_intron MGP_NODShiLtJ_T0087000.1 MGP_NODShiLtJ_G0032971.1 mouse_genomes_project 7 156264274 156271180 - MGP_NODShiLtJ_P0087000 Echs1 protein_coding protein_coding MGP_NODShiLtJ_T0087001.1 MGP_NODShiLtJ_G0032971.1 mouse_genomes_project 7 156266938 156276364 - Echs1 protein_coding retained_intron MGP_NODShiLtJ_T0087002.1 MGP_NODShiLtJ_G0032971.1 mouse_genomes_project 7 156266938 156276364 - Echs1 protein_coding retained_intron MGP_NODShiLtJ_T0087003.1 MGP_NODShiLtJ_G0032971.1 mouse_genomes_project 7 156269912 156276356 - Echs1 protein_coding processed_transcript MGP_NODShiLtJ_T0082488.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30818805 30829667 - MGP_NODShiLtJ_P0082488 Capns1 protein_coding protein_coding MGP_NODShiLtJ_T0082489.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30818853 30827733 - MGP_NODShiLtJ_P0082489 Capns1 protein_coding protein_coding MGP_NODShiLtJ_T0082490.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30819031 30824853 - Capns1 protein_coding processed_transcript MGP_NODShiLtJ_T0082491.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30819346 30828408 - Capns1 protein_coding processed_transcript MGP_NODShiLtJ_T0082492.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30819370 30827037 - Capns1 protein_coding processed_transcript MGP_NODShiLtJ_T0082493.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30819370 30828539 - MGP_NODShiLtJ_P0082493 Capns1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082494.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30819370 30828539 - MGP_NODShiLtJ_P0082494 Capns1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082495.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30824675 30828659 - MGP_NODShiLtJ_P0082495 Capns1 protein_coding protein_coding MGP_NODShiLtJ_T0082496.1 MGP_NODShiLtJ_G0031819.1 mouse_genomes_project 7 30828172 30829539 - Capns1 protein_coding retained_intron MGP_NODShiLtJ_T0082524.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30954717 30960305 + MGP_NODShiLtJ_P0082524 Alkbh6 protein_coding protein_coding MGP_NODShiLtJ_T0082525.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30954777 30960155 + MGP_NODShiLtJ_P0082525 Alkbh6 protein_coding protein_coding MGP_NODShiLtJ_T0082526.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30954777 30960162 + MGP_NODShiLtJ_P0082526 Alkbh6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082527.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30954788 30960304 + Alkbh6 protein_coding retained_intron MGP_NODShiLtJ_T0082528.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30954795 30958509 + Alkbh6 protein_coding retained_intron MGP_NODShiLtJ_T0082529.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30954809 30958421 + Alkbh6 protein_coding retained_intron MGP_NODShiLtJ_T0082530.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30954813 30957051 + Alkbh6 protein_coding processed_transcript MGP_NODShiLtJ_T0082531.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30954854 30958697 + Alkbh6 protein_coding retained_intron MGP_NODShiLtJ_T0082532.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30955771 30958662 + Alkbh6 protein_coding retained_intron MGP_NODShiLtJ_T0082533.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30957127 30958364 + Alkbh6 protein_coding retained_intron MGP_NODShiLtJ_T0082534.1 MGP_NODShiLtJ_G0031826.1 mouse_genomes_project 7 30958675 30960305 + Alkbh6 protein_coding processed_transcript MGP_NODShiLtJ_T0081067.1 MGP_NODShiLtJ_G0031375.1 mouse_genomes_project 7 1930224 1949299 - MGP_NODShiLtJ_P0081067 Ube2s protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081068.1 MGP_NODShiLtJ_G0031375.1 mouse_genomes_project 7 1942479 1946685 - Ube2s protein_coding retained_intron MGP_NODShiLtJ_T0081069.1 MGP_NODShiLtJ_G0031375.1 mouse_genomes_project 7 1943468 1949538 - MGP_NODShiLtJ_P0081069 Ube2s protein_coding protein_coding MGP_NODShiLtJ_T0081070.1 MGP_NODShiLtJ_G0031375.1 mouse_genomes_project 7 1943878 1949072 - MGP_NODShiLtJ_P0081070 Ube2s protein_coding protein_coding MGP_NODShiLtJ_T0081071.1 MGP_NODShiLtJ_G0031375.1 mouse_genomes_project 7 1946010 1948854 - MGP_NODShiLtJ_P0081071 Ube2s protein_coding protein_coding MGP_NODShiLtJ_T0005157.1 MGP_NODShiLtJ_G0004383.1 mouse_genomes_project 7 47208346 47210902 + Gm44646 antisense antisense MGP_NODShiLtJ_T0083741.1 MGP_NODShiLtJ_G0032120.1 mouse_genomes_project 7 54509264 54510605 + MGP_NODShiLtJ_P0083741 4933405O20Rik protein_coding protein_coding MGP_NODShiLtJ_T0011576.1 MGP_NODShiLtJ_G0009709.1 mouse_genomes_project 7 81039275 81039528 + Gm23020 misc_RNA misc_RNA MGP_NODShiLtJ_T0082132.1 MGP_NODShiLtJ_G0031726.1 mouse_genomes_project 7 27758313 27761910 + MGP_NODShiLtJ_P0082132 Sertad3 protein_coding protein_coding MGP_NODShiLtJ_T0082213.1 MGP_NODShiLtJ_G0031747.1 mouse_genomes_project 7 28563464 28574383 + MGP_NODShiLtJ_P0082213 Fbl protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082214.1 MGP_NODShiLtJ_G0031747.1 mouse_genomes_project 7 28563502 28574374 + MGP_NODShiLtJ_P0082214 Fbl protein_coding protein_coding MGP_NODShiLtJ_T0015671.1 MGP_NODShiLtJ_G0013779.1 mouse_genomes_project 7 44486798 44486920 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082086.1 MGP_NODShiLtJ_G0031718.1 mouse_genomes_project 7 27490256 27516784 + MGP_NODShiLtJ_P0082086 Coq8b protein_coding protein_coding MGP_NODShiLtJ_T0082087.1 MGP_NODShiLtJ_G0031718.1 mouse_genomes_project 7 27490446 27516778 + MGP_NODShiLtJ_P0082087 Coq8b protein_coding protein_coding MGP_NODShiLtJ_T0082088.1 MGP_NODShiLtJ_G0031718.1 mouse_genomes_project 7 27490591 27516779 + MGP_NODShiLtJ_P0082088 Coq8b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082089.1 MGP_NODShiLtJ_G0031718.1 mouse_genomes_project 7 27497262 27501036 + Coq8b protein_coding processed_transcript MGP_NODShiLtJ_T0082090.1 MGP_NODShiLtJ_G0031718.1 mouse_genomes_project 7 27497523 27500327 + Coq8b protein_coding retained_intron MGP_NODShiLtJ_T0082091.1 MGP_NODShiLtJ_G0031718.1 mouse_genomes_project 7 27509016 27516777 + Coq8b protein_coding retained_intron MGP_NODShiLtJ_T0082092.1 MGP_NODShiLtJ_G0031718.1 mouse_genomes_project 7 27509218 27516247 + Coq8b protein_coding processed_transcript MGP_NODShiLtJ_T0100771.1 MGP_NODShiLtJ_G0039165.1 mouse_genomes_project 7 123711145 123711278 + Gm25636 snoRNA snoRNA MGP_NODShiLtJ_T0080825.1 MGP_NODShiLtJ_G0031329.1 mouse_genomes_project 7 338092 366324 + MGP_NODShiLtJ_P0080825 Cacng8 protein_coding protein_coding MGP_NODShiLtJ_T0080826.1 MGP_NODShiLtJ_G0031329.1 mouse_genomes_project 7 341565 366281 + MGP_NODShiLtJ_P0080826 Cacng8 protein_coding protein_coding MGP_NODShiLtJ_T0080827.1 MGP_NODShiLtJ_G0031329.1 mouse_genomes_project 7 341866 342401 + MGP_NODShiLtJ_P0080827 Cacng8 protein_coding protein_coding MGP_NODShiLtJ_T0005099.1 MGP_NODShiLtJ_G0004341.1 mouse_genomes_project 7 18320999 18321765 - Gm45058 antisense antisense MGP_NODShiLtJ_T0015573.1 MGP_NODShiLtJ_G0013681.1 mouse_genomes_project 7 10947616 10948603 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010778.1 MGP_NODShiLtJ_G0008911.1 mouse_genomes_project 7 67738605 67738671 - Mir344e miRNA miRNA MGP_NODShiLtJ_T0015595.1 MGP_NODShiLtJ_G0013703.1 mouse_genomes_project 7 16680140 16680668 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085094.1 MGP_NODShiLtJ_G0032437.1 mouse_genomes_project 7 114966497 114967568 + MGP_NODShiLtJ_P0085094 Olfr561 protein_coding protein_coding MGP_NODShiLtJ_T0015614.1 MGP_NODShiLtJ_G0013722.1 mouse_genomes_project 7 25748305 25748593 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005155.1 MGP_NODShiLtJ_G0004381.1 mouse_genomes_project 7 46595634 46640484 - antisense antisense MGP_NODShiLtJ_T0008775.1 MGP_NODShiLtJ_G0007084.1 mouse_genomes_project 7 41584005 41593751 - lincRNA lincRNA MGP_NODShiLtJ_T0008776.1 MGP_NODShiLtJ_G0007084.1 mouse_genomes_project 7 41584009 41593768 - lincRNA lincRNA MGP_NODShiLtJ_T0008777.1 MGP_NODShiLtJ_G0007084.1 mouse_genomes_project 7 41584010 41593789 - lincRNA lincRNA MGP_NODShiLtJ_T0008778.1 MGP_NODShiLtJ_G0007084.1 mouse_genomes_project 7 41584063 41593752 - lincRNA lincRNA MGP_NODShiLtJ_T0087315.1 MGP_NODShiLtJ_G0033054.1 mouse_genomes_project 7 158578720 158581051 - MGP_NODShiLtJ_P0087315 protein_coding protein_coding MGP_NODShiLtJ_T0083446.1 MGP_NODShiLtJ_G0032037.1 mouse_genomes_project 7 48230990 48232032 + MGP_NODShiLtJ_P0083446 Lhb protein_coding protein_coding MGP_NODShiLtJ_T0010750.1 MGP_NODShiLtJ_G0008883.1 mouse_genomes_project 7 30361008 30361091 + Mir1964 miRNA miRNA MGP_NODShiLtJ_T0102084.1 MGP_NODShiLtJ_G0040251.1 mouse_genomes_project 7 12698686 12703992 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002191.1 MGP_NODShiLtJ_G0002103.1 mouse_genomes_project 7 60960762 60964782 - TEC TEC MGP_NODShiLtJ_T0005237.1 MGP_NODShiLtJ_G0004438.1 mouse_genomes_project 7 142840487 142845988 - Gm44759 antisense antisense MGP_NODShiLtJ_T0081527.1 MGP_NODShiLtJ_G0031556.1 mouse_genomes_project 7 18247159 18294275 + MGP_NODShiLtJ_P0081527 protein_coding protein_coding MGP_NODShiLtJ_T0083693.1 MGP_NODShiLtJ_G0032108.1 mouse_genomes_project 7 52236949 52256797 - MGP_NODShiLtJ_P0083693 Mrgprx2 protein_coding protein_coding MGP_NODShiLtJ_T0083694.1 MGP_NODShiLtJ_G0032108.1 mouse_genomes_project 7 52238956 52253601 - MGP_NODShiLtJ_P0083694 Mrgprx2 protein_coding protein_coding MGP_NODShiLtJ_T0002153.1 MGP_NODShiLtJ_G0002065.1 mouse_genomes_project 7 18182332 18183569 + TEC TEC MGP_NODShiLtJ_T0015659.1 MGP_NODShiLtJ_G0013767.1 mouse_genomes_project 7 43212059 43212855 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100782.1 MGP_NODShiLtJ_G0039176.1 mouse_genomes_project 7 139487532 139487675 + Gm23168 snoRNA snoRNA MGP_NODShiLtJ_T0083409.1 MGP_NODShiLtJ_G0032029.1 mouse_genomes_project 7 48073141 48084623 + MGP_NODShiLtJ_P0083409 protein_coding protein_coding MGP_NODShiLtJ_T0083410.1 MGP_NODShiLtJ_G0032029.1 mouse_genomes_project 7 48078117 48080892 + protein_coding processed_transcript MGP_NODShiLtJ_T0083411.1 MGP_NODShiLtJ_G0032029.1 mouse_genomes_project 7 48078368 48082287 + protein_coding retained_intron MGP_NODShiLtJ_T0083412.1 MGP_NODShiLtJ_G0032029.1 mouse_genomes_project 7 48078404 48084210 + MGP_NODShiLtJ_P0083412 protein_coding protein_coding MGP_NODShiLtJ_T0083413.1 MGP_NODShiLtJ_G0032029.1 mouse_genomes_project 7 48078501 48084622 + MGP_NODShiLtJ_P0083413 protein_coding protein_coding MGP_NODShiLtJ_T0083414.1 MGP_NODShiLtJ_G0032029.1 mouse_genomes_project 7 48082764 48084627 + protein_coding retained_intron MGP_NODShiLtJ_T0005232.1 MGP_NODShiLtJ_G0004434.1 mouse_genomes_project 7 141788449 141789501 - 2510046G10Rik antisense antisense MGP_NODShiLtJ_T0005233.1 MGP_NODShiLtJ_G0004434.1 mouse_genomes_project 7 141789129 141789477 - 2510046G10Rik antisense antisense MGP_NODShiLtJ_T0084283.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88526146 88541727 - MGP_NODShiLtJ_P0084283 Unc45a protein_coding protein_coding MGP_NODShiLtJ_T0084284.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88526149 88540950 - MGP_NODShiLtJ_P0084284 Unc45a protein_coding protein_coding MGP_NODShiLtJ_T0084285.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88526150 88540902 - MGP_NODShiLtJ_P0084285 Unc45a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084286.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88526180 88540493 - MGP_NODShiLtJ_P0084286 Unc45a protein_coding protein_coding MGP_NODShiLtJ_T0084287.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88535103 88540937 - MGP_NODShiLtJ_P0084287 Unc45a protein_coding protein_coding MGP_NODShiLtJ_T0084288.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88539201 88540932 - Unc45a protein_coding retained_intron MGP_NODShiLtJ_T0084289.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88539751 88540879 - Unc45a protein_coding retained_intron MGP_NODShiLtJ_T0084290.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88540039 88540948 - MGP_NODShiLtJ_P0084290 Unc45a protein_coding protein_coding MGP_NODShiLtJ_T0084291.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88540043 88540950 - Unc45a protein_coding processed_transcript MGP_NODShiLtJ_T0084292.1 MGP_NODShiLtJ_G0032228.1 mouse_genomes_project 7 88540434 88540942 - Unc45a protein_coding retained_intron MGP_NODShiLtJ_T0087019.1 MGP_NODShiLtJ_G0032979.1 mouse_genomes_project 7 156416361 156472762 + MGP_NODShiLtJ_P0087019 5830411N06Rik protein_coding protein_coding MGP_NODShiLtJ_T0087020.1 MGP_NODShiLtJ_G0032979.1 mouse_genomes_project 7 156416438 156474912 + MGP_NODShiLtJ_P0087020 5830411N06Rik protein_coding protein_coding MGP_NODShiLtJ_T0087021.1 MGP_NODShiLtJ_G0032979.1 mouse_genomes_project 7 156416441 156474912 + MGP_NODShiLtJ_P0087021 5830411N06Rik protein_coding protein_coding MGP_NODShiLtJ_T0083505.1 MGP_NODShiLtJ_G0032049.1 mouse_genomes_project 7 48456168 48457752 - MGP_NODShiLtJ_P0083505 Fgf21 protein_coding protein_coding MGP_NODShiLtJ_T0086512.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143085289 143112783 + Stx4a protein_coding processed_transcript MGP_NODShiLtJ_T0086513.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143104939 143112783 + MGP_NODShiLtJ_P0086513 Stx4a protein_coding protein_coding MGP_NODShiLtJ_T0086514.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143105143 143112771 + MGP_NODShiLtJ_P0086514 Stx4a protein_coding protein_coding MGP_NODShiLtJ_T0086515.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143105145 143107122 + Stx4a protein_coding retained_intron MGP_NODShiLtJ_T0086516.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143105153 143109826 + MGP_NODShiLtJ_P0086516 Stx4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086517.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143105860 143109794 + Stx4a protein_coding retained_intron MGP_NODShiLtJ_T0086518.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143106775 143112448 + Stx4a protein_coding retained_intron MGP_NODShiLtJ_T0086519.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143108991 143112269 + Stx4a protein_coding retained_intron MGP_NODShiLtJ_T0086520.1 MGP_NODShiLtJ_G0032865.1 mouse_genomes_project 7 143112161 143112783 + Stx4a protein_coding retained_intron MGP_NODShiLtJ_T0085120.1 MGP_NODShiLtJ_G0032461.1 mouse_genomes_project 7 115598230 115599175 - MGP_NODShiLtJ_P0085120 protein_coding protein_coding MGP_NODShiLtJ_T0085420.1 MGP_NODShiLtJ_G0032640.1 mouse_genomes_project 7 122458122 122459177 - MGP_NODShiLtJ_P0085420 Olfr517 protein_coding protein_coding MGP_NODShiLtJ_T0008789.1 MGP_NODShiLtJ_G0007092.1 mouse_genomes_project 7 46287668 46288142 - Gm44819 lincRNA lincRNA MGP_NODShiLtJ_T0102092.1 MGP_NODShiLtJ_G0040259.1 mouse_genomes_project 7 13265539 13266550 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085987.1 MGP_NODShiLtJ_G0032771.1 mouse_genomes_project 7 138389040 138394754 + MGP_NODShiLtJ_P0085987 Aqp8 protein_coding protein_coding MGP_NODShiLtJ_T0085988.1 MGP_NODShiLtJ_G0032771.1 mouse_genomes_project 7 138389061 138394736 + MGP_NODShiLtJ_P0085988 Aqp8 protein_coding protein_coding MGP_NODShiLtJ_T0085989.1 MGP_NODShiLtJ_G0032771.1 mouse_genomes_project 7 138390500 138394748 + Aqp8 protein_coding processed_transcript MGP_NODShiLtJ_T0082048.1 MGP_NODShiLtJ_G0031704.1 mouse_genomes_project 7 26930113 26941484 + MGP_NODShiLtJ_P0082048 Cyp2g1 protein_coding protein_coding MGP_NODShiLtJ_T0082049.1 MGP_NODShiLtJ_G0031704.1 mouse_genomes_project 7 26937492 26939456 + Cyp2g1 protein_coding retained_intron MGP_NODShiLtJ_T0005118.1 MGP_NODShiLtJ_G0004353.1 mouse_genomes_project 7 26950058 26952930 - Gm44963 antisense antisense MGP_NODShiLtJ_T0081910.1 MGP_NODShiLtJ_G0031669.1 mouse_genomes_project 7 25050479 25075824 - Dedd2 protein_coding processed_transcript MGP_NODShiLtJ_T0081911.1 MGP_NODShiLtJ_G0031669.1 mouse_genomes_project 7 25053404 25075824 - MGP_NODShiLtJ_P0081911 Dedd2 protein_coding protein_coding MGP_NODShiLtJ_T0081912.1 MGP_NODShiLtJ_G0031669.1 mouse_genomes_project 7 25053405 25076580 - MGP_NODShiLtJ_P0081912 Dedd2 protein_coding protein_coding MGP_NODShiLtJ_T0081913.1 MGP_NODShiLtJ_G0031669.1 mouse_genomes_project 7 25073085 25075836 - Dedd2 protein_coding retained_intron MGP_NODShiLtJ_T0100747.1 MGP_NODShiLtJ_G0039141.1 mouse_genomes_project 7 64803683 64803771 - Gm22496 snoRNA snoRNA MGP_NODShiLtJ_T0085594.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127513838 127591664 + MGP_NODShiLtJ_P0085594 Far1 protein_coding protein_coding MGP_NODShiLtJ_T0085595.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127513865 127557175 + Far1 protein_coding retained_intron MGP_NODShiLtJ_T0085596.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127513865 127554251 + MGP_NODShiLtJ_P0085596 Far1 protein_coding protein_coding MGP_NODShiLtJ_T0085597.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127513865 127591664 + MGP_NODShiLtJ_P0085597 Far1 protein_coding protein_coding MGP_NODShiLtJ_T0085598.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127513866 127590611 + MGP_NODShiLtJ_P0085598 Far1 protein_coding protein_coding MGP_NODShiLtJ_T0085599.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127513881 127556710 + MGP_NODShiLtJ_P0085599 Far1 protein_coding protein_coding MGP_NODShiLtJ_T0085600.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127513885 127531277 + Far1 protein_coding retained_intron MGP_NODShiLtJ_T0085601.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127514102 127546067 + MGP_NODShiLtJ_P0085601 Far1 protein_coding protein_coding MGP_NODShiLtJ_T0085602.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127554128 127559813 + Far1 protein_coding retained_intron MGP_NODShiLtJ_T0085603.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127571913 127587655 + Far1 protein_coding retained_intron MGP_NODShiLtJ_T0085604.1 MGP_NODShiLtJ_G0032684.1 mouse_genomes_project 7 127585219 127587710 + Far1 protein_coding retained_intron MGP_NODShiLtJ_T0083723.1 MGP_NODShiLtJ_G0032115.1 mouse_genomes_project 7 53486286 53491623 - MGP_NODShiLtJ_P0083723 Dbx1 protein_coding protein_coding MGP_NODShiLtJ_T0083145.1 MGP_NODShiLtJ_G0031966.1 mouse_genomes_project 7 46465186 46474777 + MGP_NODShiLtJ_P0083145 Klk6 protein_coding protein_coding MGP_NODShiLtJ_T0083146.1 MGP_NODShiLtJ_G0031966.1 mouse_genomes_project 7 46465245 46474533 + MGP_NODShiLtJ_P0083146 Klk6 protein_coding protein_coding MGP_NODShiLtJ_T0083147.1 MGP_NODShiLtJ_G0031966.1 mouse_genomes_project 7 46465257 46471341 + MGP_NODShiLtJ_P0083147 Klk6 protein_coding protein_coding MGP_NODShiLtJ_T0083148.1 MGP_NODShiLtJ_G0031966.1 mouse_genomes_project 7 46468147 46474533 + MGP_NODShiLtJ_P0083148 Klk6 protein_coding protein_coding MGP_NODShiLtJ_T0083563.1 MGP_NODShiLtJ_G0032067.1 mouse_genomes_project 7 48705106 48710669 - MGP_NODShiLtJ_P0083563 Grwd1 protein_coding protein_coding MGP_NODShiLtJ_T0083564.1 MGP_NODShiLtJ_G0032067.1 mouse_genomes_project 7 48705109 48710656 - MGP_NODShiLtJ_P0083564 Grwd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083565.1 MGP_NODShiLtJ_G0032067.1 mouse_genomes_project 7 48705111 48710824 - MGP_NODShiLtJ_P0083565 Grwd1 protein_coding protein_coding MGP_NODShiLtJ_T0083566.1 MGP_NODShiLtJ_G0032067.1 mouse_genomes_project 7 48705942 48710761 - MGP_NODShiLtJ_P0083566 Grwd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082044.1 MGP_NODShiLtJ_G0031702.1 mouse_genomes_project 7 26768811 26789957 - MGP_NODShiLtJ_P0082044 Cyp2b23 protein_coding protein_coding MGP_NODShiLtJ_T0010779.1 MGP_NODShiLtJ_G0008912.1 mouse_genomes_project 7 67738607 67738667 - Mir344h-1 miRNA miRNA MGP_NODShiLtJ_T0080983.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1584771 1597743 - MGP_NODShiLtJ_P0080983 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080984.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1584771 1597772 - MGP_NODShiLtJ_P0080984 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080985.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1584864 1597727 - MGP_NODShiLtJ_P0080985 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080986.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1584864 1597743 - MGP_NODShiLtJ_P0080986 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080987.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1584956 1596136 - MGP_NODShiLtJ_P0080987 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080988.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1584985 1591682 - Tnnt1 protein_coding retained_intron MGP_NODShiLtJ_T0080989.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1584987 1589771 - Tnnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0080990.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1589313 1597729 - MGP_NODShiLtJ_P0080990 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080991.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1589345 1591542 - Tnnt1 protein_coding retained_intron MGP_NODShiLtJ_T0080992.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1590253 1596383 - MGP_NODShiLtJ_P0080992 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080993.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1590321 1596342 - MGP_NODShiLtJ_P0080993 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080994.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1591353 1598150 - MGP_NODShiLtJ_P0080994 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0080995.1 MGP_NODShiLtJ_G0031358.1 mouse_genomes_project 7 1595596 1596875 - MGP_NODShiLtJ_P0080995 Tnnt1 protein_coding protein_coding MGP_NODShiLtJ_T0005250.1 MGP_NODShiLtJ_G0004448.1 mouse_genomes_project 7 148683480 148687451 - Gm15718 antisense antisense MGP_NODShiLtJ_T0084041.1 MGP_NODShiLtJ_G0032185.1 mouse_genomes_project 7 80716572 80759158 + MGP_NODShiLtJ_P0084041 Rgma protein_coding protein_coding MGP_NODShiLtJ_T0084042.1 MGP_NODShiLtJ_G0032185.1 mouse_genomes_project 7 80731842 80749699 + MGP_NODShiLtJ_P0084042 Rgma protein_coding protein_coding MGP_NODShiLtJ_T0084043.1 MGP_NODShiLtJ_G0032185.1 mouse_genomes_project 7 80731958 80733930 + Rgma protein_coding retained_intron MGP_NODShiLtJ_T0084809.1 MGP_NODShiLtJ_G0032367.1 mouse_genomes_project 7 111712272 111771926 + MGP_NODShiLtJ_P0084809 Xrra1 protein_coding protein_coding MGP_NODShiLtJ_T0085155.1 MGP_NODShiLtJ_G0032494.1 mouse_genomes_project 7 116390045 116390993 + MGP_NODShiLtJ_P0085155 Olfr65 protein_coding protein_coding MGP_NODShiLtJ_T0100775.1 MGP_NODShiLtJ_G0039169.1 mouse_genomes_project 7 128994615 128994747 - Gm24982 snoRNA snoRNA MGP_NODShiLtJ_T0084080.1 MGP_NODShiLtJ_G0032191.1 mouse_genomes_project 7 82992166 83296221 + MGP_NODShiLtJ_P0084080 Akap13 protein_coding protein_coding MGP_NODShiLtJ_T0084081.1 MGP_NODShiLtJ_G0032191.1 mouse_genomes_project 7 83072236 83296226 + MGP_NODShiLtJ_P0084081 Akap13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082716.1 MGP_NODShiLtJ_G0031864.1 mouse_genomes_project 7 31619235 31639050 - MGP_NODShiLtJ_P0082716 Mag protein_coding protein_coding MGP_NODShiLtJ_T0082717.1 MGP_NODShiLtJ_G0031864.1 mouse_genomes_project 7 31619242 31638533 - MGP_NODShiLtJ_P0082717 Mag protein_coding protein_coding MGP_NODShiLtJ_T0082718.1 MGP_NODShiLtJ_G0031864.1 mouse_genomes_project 7 31619590 31638514 - MGP_NODShiLtJ_P0082718 Mag protein_coding protein_coding MGP_NODShiLtJ_T0082719.1 MGP_NODShiLtJ_G0031864.1 mouse_genomes_project 7 31619645 31638514 - MGP_NODShiLtJ_P0082719 Mag protein_coding protein_coding MGP_NODShiLtJ_T0082720.1 MGP_NODShiLtJ_G0031864.1 mouse_genomes_project 7 31631102 31639091 - Mag protein_coding retained_intron MGP_NODShiLtJ_T0082721.1 MGP_NODShiLtJ_G0031864.1 mouse_genomes_project 7 31632747 31639083 - MGP_NODShiLtJ_P0082721 Mag protein_coding protein_coding MGP_NODShiLtJ_T0082722.1 MGP_NODShiLtJ_G0031864.1 mouse_genomes_project 7 31635762 31639042 - MGP_NODShiLtJ_P0082722 Mag protein_coding protein_coding MGP_NODShiLtJ_T0082723.1 MGP_NODShiLtJ_G0031864.1 mouse_genomes_project 7 31636139 31639063 - Mag protein_coding processed_transcript MGP_NODShiLtJ_T0008795.1 MGP_NODShiLtJ_G0007097.1 mouse_genomes_project 7 53725285 53726724 - Gm26856 lincRNA lincRNA MGP_NODShiLtJ_T0083687.1 MGP_NODShiLtJ_G0032104.1 mouse_genomes_project 7 51802122 51926710 - MGP_NODShiLtJ_P0083687 protein_coding protein_coding MGP_NODShiLtJ_T0084030.1 MGP_NODShiLtJ_G0032181.1 mouse_genomes_project 7 75513343 75525541 - MGP_NODShiLtJ_P0084030 Arrdc4 protein_coding protein_coding MGP_NODShiLtJ_T0084031.1 MGP_NODShiLtJ_G0032181.1 mouse_genomes_project 7 75517810 75521206 - Arrdc4 protein_coding retained_intron MGP_NODShiLtJ_T0084032.1 MGP_NODShiLtJ_G0032181.1 mouse_genomes_project 7 75517902 75525488 - MGP_NODShiLtJ_P0084032 Arrdc4 protein_coding protein_coding MGP_NODShiLtJ_T0084213.1 MGP_NODShiLtJ_G0032214.1 mouse_genomes_project 7 87931681 87934394 + MGP_NODShiLtJ_P0084213 Mesp2 protein_coding protein_coding MGP_NODShiLtJ_T0005159.1 MGP_NODShiLtJ_G0004385.1 mouse_genomes_project 7 48473176 48475314 - antisense antisense MGP_NODShiLtJ_T0005160.1 MGP_NODShiLtJ_G0004385.1 mouse_genomes_project 7 48474270 48475582 - antisense antisense MGP_NODShiLtJ_T0081840.1 MGP_NODShiLtJ_G0031655.1 mouse_genomes_project 7 24492439 24494026 - MGP_NODShiLtJ_P0081840 Gm4763 protein_coding protein_coding MGP_NODShiLtJ_T0081841.1 MGP_NODShiLtJ_G0031655.1 mouse_genomes_project 7 24492651 24494287 - Gm4763 protein_coding processed_transcript MGP_NODShiLtJ_T0086180.1 MGP_NODShiLtJ_G0032804.1 mouse_genomes_project 7 141923844 141933120 + MGP_NODShiLtJ_P0086180 Gdpd3 protein_coding protein_coding MGP_NODShiLtJ_T0086181.1 MGP_NODShiLtJ_G0032804.1 mouse_genomes_project 7 141924355 141925723 + Gdpd3 protein_coding retained_intron MGP_NODShiLtJ_T0086182.1 MGP_NODShiLtJ_G0032804.1 mouse_genomes_project 7 141924357 141926172 + Gdpd3 protein_coding retained_intron MGP_NODShiLtJ_T0086183.1 MGP_NODShiLtJ_G0032804.1 mouse_genomes_project 7 141924685 141925546 + Gdpd3 protein_coding retained_intron MGP_NODShiLtJ_T0086184.1 MGP_NODShiLtJ_G0032804.1 mouse_genomes_project 7 141925660 141928675 + Gdpd3 protein_coding retained_intron MGP_NODShiLtJ_T0086185.1 MGP_NODShiLtJ_G0032804.1 mouse_genomes_project 7 141926030 141933124 + Gdpd3 protein_coding retained_intron MGP_NODShiLtJ_T0081848.1 MGP_NODShiLtJ_G0031658.1 mouse_genomes_project 7 24666682 24672372 - MGP_NODShiLtJ_P0081848 Lypd4 protein_coding protein_coding MGP_NODShiLtJ_T0081849.1 MGP_NODShiLtJ_G0031658.1 mouse_genomes_project 7 24667387 24672163 - MGP_NODShiLtJ_P0081849 Lypd4 protein_coding protein_coding MGP_NODShiLtJ_T0084318.1 MGP_NODShiLtJ_G0032232.1 mouse_genomes_project 7 88589605 88598478 - Furin protein_coding retained_intron MGP_NODShiLtJ_T0084319.1 MGP_NODShiLtJ_G0032232.1 mouse_genomes_project 7 88590213 88608782 - MGP_NODShiLtJ_P0084319 Furin protein_coding protein_coding MGP_NODShiLtJ_T0084320.1 MGP_NODShiLtJ_G0032232.1 mouse_genomes_project 7 88590214 88606113 - MGP_NODShiLtJ_P0084320 Furin protein_coding protein_coding MGP_NODShiLtJ_T0084321.1 MGP_NODShiLtJ_G0032232.1 mouse_genomes_project 7 88590216 88603834 - MGP_NODShiLtJ_P0084321 Furin protein_coding protein_coding MGP_NODShiLtJ_T0084322.1 MGP_NODShiLtJ_G0032232.1 mouse_genomes_project 7 88596901 88604704 - MGP_NODShiLtJ_P0084322 Furin protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084323.1 MGP_NODShiLtJ_G0032232.1 mouse_genomes_project 7 88597211 88601592 - Furin protein_coding retained_intron MGP_NODShiLtJ_T0084324.1 MGP_NODShiLtJ_G0032232.1 mouse_genomes_project 7 88600716 88608787 - MGP_NODShiLtJ_P0084324 Furin protein_coding protein_coding MGP_NODShiLtJ_T0084325.1 MGP_NODShiLtJ_G0032232.1 mouse_genomes_project 7 88600763 88606673 - MGP_NODShiLtJ_P0084325 Furin protein_coding protein_coding MGP_NODShiLtJ_T0015689.1 MGP_NODShiLtJ_G0013797.1 mouse_genomes_project 7 48687735 48699654 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100764.1 MGP_NODShiLtJ_G0039158.1 mouse_genomes_project 7 111289190 111289338 - Snord15a snoRNA snoRNA MGP_NODShiLtJ_T0008749.1 MGP_NODShiLtJ_G0007062.1 mouse_genomes_project 7 35342983 35349170 + Gm26762 lincRNA lincRNA MGP_NODShiLtJ_T0083628.1 MGP_NODShiLtJ_G0032084.1 mouse_genomes_project 7 49609268 49633218 - MGP_NODShiLtJ_P0083628 Saal1 protein_coding protein_coding MGP_NODShiLtJ_T0083629.1 MGP_NODShiLtJ_G0032084.1 mouse_genomes_project 7 49612429 49631455 - Saal1 protein_coding retained_intron MGP_NODShiLtJ_T0083630.1 MGP_NODShiLtJ_G0032084.1 mouse_genomes_project 7 49612464 49633179 - Saal1 protein_coding retained_intron MGP_NODShiLtJ_T0083631.1 MGP_NODShiLtJ_G0032084.1 mouse_genomes_project 7 49612466 49613058 - Saal1 protein_coding processed_transcript MGP_NODShiLtJ_T0083632.1 MGP_NODShiLtJ_G0032084.1 mouse_genomes_project 7 49614425 49633196 - Saal1 protein_coding retained_intron MGP_NODShiLtJ_T0083633.1 MGP_NODShiLtJ_G0032084.1 mouse_genomes_project 7 49614847 49633199 - Saal1 protein_coding retained_intron MGP_NODShiLtJ_T0018274.1 MGP_NODShiLtJ_G0015567.1 mouse_genomes_project 7 158302553 158303349 - processed_transcript processed_transcript MGP_NODShiLtJ_T0101195.1 MGP_NODShiLtJ_G0039504.1 mouse_genomes_project 7 141249218 141253593 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101196.1 MGP_NODShiLtJ_G0039504.1 mouse_genomes_project 7 141250834 141251791 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0087320.1 MGP_NODShiLtJ_G0033059.1 mouse_genomes_project 7 158755657 158756702 + MGP_NODShiLtJ_P0087320 protein_coding protein_coding MGP_NODShiLtJ_T0082557.1 MGP_NODShiLtJ_G0031833.1 mouse_genomes_project 7 31068238 31076307 + MGP_NODShiLtJ_P0082557 Nfkbid protein_coding protein_coding MGP_NODShiLtJ_T0082558.1 MGP_NODShiLtJ_G0031833.1 mouse_genomes_project 7 31068912 31076306 + MGP_NODShiLtJ_P0082558 Nfkbid protein_coding protein_coding MGP_NODShiLtJ_T0082559.1 MGP_NODShiLtJ_G0031833.1 mouse_genomes_project 7 31069781 31076307 + MGP_NODShiLtJ_P0082559 Nfkbid protein_coding protein_coding MGP_NODShiLtJ_T0082560.1 MGP_NODShiLtJ_G0031833.1 mouse_genomes_project 7 31073134 31073838 + Nfkbid protein_coding retained_intron MGP_NODShiLtJ_T0098447.1 MGP_NODShiLtJ_G0036848.1 mouse_genomes_project 7 99545859 99578277 - sense_intronic sense_intronic MGP_NODShiLtJ_T0008938.1 MGP_NODShiLtJ_G0007192.1 mouse_genomes_project 7 141894620 141896261 + 4930448A20Rik lincRNA lincRNA MGP_NODShiLtJ_T0083416.1 MGP_NODShiLtJ_G0032031.1 mouse_genomes_project 7 48133705 48138954 + MGP_NODShiLtJ_P0083416 Hrc protein_coding protein_coding MGP_NODShiLtJ_T0005108.1 MGP_NODShiLtJ_G0004347.1 mouse_genomes_project 7 19373088 19382194 + Gm16251 antisense antisense MGP_NODShiLtJ_T0087065.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154142 157172667 + MGP_NODShiLtJ_P0087065 Psmd13 protein_coding protein_coding MGP_NODShiLtJ_T0087066.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154588 157171937 + Psmd13 protein_coding retained_intron MGP_NODShiLtJ_T0087067.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154603 157159440 + Psmd13 protein_coding processed_transcript MGP_NODShiLtJ_T0087068.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154612 157159038 + Psmd13 protein_coding processed_transcript MGP_NODShiLtJ_T0087069.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154626 157161894 + Psmd13 protein_coding processed_transcript MGP_NODShiLtJ_T0087070.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154641 157159353 + Psmd13 protein_coding retained_intron MGP_NODShiLtJ_T0087071.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154646 157172313 + MGP_NODShiLtJ_P0087071 Psmd13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087072.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154646 157172258 + MGP_NODShiLtJ_P0087072 Psmd13 protein_coding protein_coding MGP_NODShiLtJ_T0087073.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157154646 157172313 + MGP_NODShiLtJ_P0087073 Psmd13 protein_coding protein_coding MGP_NODShiLtJ_T0087074.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157155674 157158606 + Psmd13 protein_coding processed_transcript MGP_NODShiLtJ_T0087075.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157161574 157172420 + MGP_NODShiLtJ_P0087075 Psmd13 protein_coding protein_coding MGP_NODShiLtJ_T0087076.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157162563 157171865 + Psmd13 protein_coding retained_intron MGP_NODShiLtJ_T0087077.1 MGP_NODShiLtJ_G0033005.1 mouse_genomes_project 7 157167130 157172668 + MGP_NODShiLtJ_P0087077 Psmd13 protein_coding protein_coding MGP_NODShiLtJ_T0083267.1 MGP_NODShiLtJ_G0031987.1 mouse_genomes_project 7 47284637 47299979 + Napsa protein_coding retained_intron MGP_NODShiLtJ_T0083268.1 MGP_NODShiLtJ_G0031987.1 mouse_genomes_project 7 47284637 47303650 + MGP_NODShiLtJ_P0083268 Napsa protein_coding protein_coding MGP_NODShiLtJ_T0080958.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1540750 1550016 + MGP_NODShiLtJ_P0080958 Eps8l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080959.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1540750 1549273 + MGP_NODShiLtJ_P0080959 Eps8l1 protein_coding protein_coding MGP_NODShiLtJ_T0080960.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1540759 1559397 + MGP_NODShiLtJ_P0080960 Eps8l1 protein_coding protein_coding MGP_NODShiLtJ_T0080961.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1544538 1550880 + MGP_NODShiLtJ_P0080961 Eps8l1 protein_coding protein_coding MGP_NODShiLtJ_T0080962.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1544780 1549415 + Eps8l1 protein_coding retained_intron MGP_NODShiLtJ_T0080963.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1544787 1550225 + Eps8l1 protein_coding retained_intron MGP_NODShiLtJ_T0080964.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1544787 1559235 + MGP_NODShiLtJ_P0080964 Eps8l1 protein_coding protein_coding MGP_NODShiLtJ_T0080965.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1544814 1550088 + MGP_NODShiLtJ_P0080965 Eps8l1 protein_coding protein_coding MGP_NODShiLtJ_T0080966.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1544894 1560480 + MGP_NODShiLtJ_P0080966 Eps8l1 protein_coding protein_coding MGP_NODShiLtJ_T0080967.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1544906 1559233 + MGP_NODShiLtJ_P0080967 Eps8l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080968.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1544914 1549965 + MGP_NODShiLtJ_P0080968 Eps8l1 protein_coding protein_coding MGP_NODShiLtJ_T0080969.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1553975 1554629 + Eps8l1 protein_coding processed_transcript MGP_NODShiLtJ_T0080970.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1557420 1557963 + Eps8l1 protein_coding processed_transcript MGP_NODShiLtJ_T0080971.1 MGP_NODShiLtJ_G0031356.1 mouse_genomes_project 7 1557658 1559237 + MGP_NODShiLtJ_P0080971 Eps8l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084082.1 MGP_NODShiLtJ_G0032192.1 mouse_genomes_project 7 83439236 83489009 + MGP_NODShiLtJ_P0084082 Klhl25 protein_coding protein_coding MGP_NODShiLtJ_T0084083.1 MGP_NODShiLtJ_G0032192.1 mouse_genomes_project 7 83439264 83489008 + MGP_NODShiLtJ_P0084083 Klhl25 protein_coding protein_coding MGP_NODShiLtJ_T0084084.1 MGP_NODShiLtJ_G0032192.1 mouse_genomes_project 7 83439267 83482154 + MGP_NODShiLtJ_P0084084 Klhl25 protein_coding protein_coding MGP_NODShiLtJ_T0084085.1 MGP_NODShiLtJ_G0032192.1 mouse_genomes_project 7 83439290 83482150 + MGP_NODShiLtJ_P0084085 Klhl25 protein_coding protein_coding MGP_NODShiLtJ_T0084086.1 MGP_NODShiLtJ_G0032192.1 mouse_genomes_project 7 83439323 83488403 + Klhl25 protein_coding processed_transcript MGP_NODShiLtJ_T0084087.1 MGP_NODShiLtJ_G0032192.1 mouse_genomes_project 7 83439367 83480290 + MGP_NODShiLtJ_P0084087 Klhl25 protein_coding protein_coding MGP_NODShiLtJ_T0011582.1 MGP_NODShiLtJ_G0009715.1 mouse_genomes_project 7 106594792 106595086 + Gm23884 misc_RNA misc_RNA MGP_NODShiLtJ_T0015577.1 MGP_NODShiLtJ_G0013685.1 mouse_genomes_project 7 11945210 11953240 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082507.1 MGP_NODShiLtJ_G0031822.1 mouse_genomes_project 7 30872959 30875246 - MGP_NODShiLtJ_P0082507 Ovol3 protein_coding protein_coding MGP_NODShiLtJ_T0081603.1 MGP_NODShiLtJ_G0031578.1 mouse_genomes_project 7 18682800 18690122 - MGP_NODShiLtJ_P0081603 Fosb protein_coding protein_coding MGP_NODShiLtJ_T0083506.1 MGP_NODShiLtJ_G0032050.1 mouse_genomes_project 7 48459867 48463300 + MGP_NODShiLtJ_P0083506 Fut1 protein_coding protein_coding MGP_NODShiLtJ_T0081701.1 MGP_NODShiLtJ_G0031604.1 mouse_genomes_project 7 19199331 19218850 - Cblc protein_coding processed_transcript MGP_NODShiLtJ_T0081702.1 MGP_NODShiLtJ_G0031604.1 mouse_genomes_project 7 19200069 19205959 - Cblc protein_coding processed_transcript MGP_NODShiLtJ_T0081703.1 MGP_NODShiLtJ_G0031604.1 mouse_genomes_project 7 19200162 19228041 - MGP_NODShiLtJ_P0081703 Cblc protein_coding protein_coding MGP_NODShiLtJ_T0081704.1 MGP_NODShiLtJ_G0031604.1 mouse_genomes_project 7 19200162 19228057 - MGP_NODShiLtJ_P0081704 Cblc protein_coding protein_coding MGP_NODShiLtJ_T0081705.1 MGP_NODShiLtJ_G0031604.1 mouse_genomes_project 7 19213945 19223455 - Cblc protein_coding processed_transcript MGP_NODShiLtJ_T0081706.1 MGP_NODShiLtJ_G0031604.1 mouse_genomes_project 7 19220218 19224424 - Cblc protein_coding processed_transcript MGP_NODShiLtJ_T0081707.1 MGP_NODShiLtJ_G0031604.1 mouse_genomes_project 7 19223070 19228053 - Cblc protein_coding retained_intron MGP_NODShiLtJ_T0082371.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29676567 29680267 - MGP_NODShiLtJ_P0082371 Fam98c protein_coding protein_coding MGP_NODShiLtJ_T0082372.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29676568 29680240 - Fam98c protein_coding retained_intron MGP_NODShiLtJ_T0082373.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29676568 29680260 - Fam98c protein_coding retained_intron MGP_NODShiLtJ_T0082374.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29676568 29680240 - Fam98c protein_coding retained_intron MGP_NODShiLtJ_T0082375.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29676568 29680240 - MGP_NODShiLtJ_P0082375 Fam98c protein_coding protein_coding MGP_NODShiLtJ_T0082376.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29676575 29680217 - MGP_NODShiLtJ_P0082376 Fam98c protein_coding protein_coding MGP_NODShiLtJ_T0082377.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29676610 29679776 - MGP_NODShiLtJ_P0082377 Fam98c protein_coding protein_coding MGP_NODShiLtJ_T0082378.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29677449 29680291 - MGP_NODShiLtJ_P0082378 Fam98c protein_coding protein_coding MGP_NODShiLtJ_T0082379.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29677480 29679660 - MGP_NODShiLtJ_P0082379 Fam98c protein_coding protein_coding MGP_NODShiLtJ_T0082380.1 MGP_NODShiLtJ_G0031787.1 mouse_genomes_project 7 29677563 29680260 - Fam98c protein_coding processed_transcript MGP_NODShiLtJ_T0011594.1 MGP_NODShiLtJ_G0009727.1 mouse_genomes_project 7 159965426 159965487 + Gm27901 misc_RNA misc_RNA MGP_NODShiLtJ_T0084137.1 MGP_NODShiLtJ_G0032201.1 mouse_genomes_project 7 87183923 87209902 - MGP_NODShiLtJ_P0084137 Hapln3 protein_coding protein_coding MGP_NODShiLtJ_T0084138.1 MGP_NODShiLtJ_G0032201.1 mouse_genomes_project 7 87184559 87209879 - MGP_NODShiLtJ_P0084138 Hapln3 protein_coding protein_coding MGP_NODShiLtJ_T0084139.1 MGP_NODShiLtJ_G0032201.1 mouse_genomes_project 7 87185841 87209897 - MGP_NODShiLtJ_P0084139 Hapln3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084140.1 MGP_NODShiLtJ_G0032201.1 mouse_genomes_project 7 87190889 87207540 - Hapln3 protein_coding processed_transcript MGP_NODShiLtJ_T0010777.1 MGP_NODShiLtJ_G0008910.1 mouse_genomes_project 7 67736753 67736851 - Gm23917 miRNA miRNA MGP_NODShiLtJ_T0086297.1 MGP_NODShiLtJ_G0032821.1 mouse_genomes_project 7 142173560 142188795 - MGP_NODShiLtJ_P0086297 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086409.1 MGP_NODShiLtJ_G0032848.1 mouse_genomes_project 7 142715523 142728491 + MGP_NODShiLtJ_P0086409 protein_coding protein_coding MGP_NODShiLtJ_T0086410.1 MGP_NODShiLtJ_G0032848.1 mouse_genomes_project 7 142716339 142719818 + protein_coding processed_transcript MGP_NODShiLtJ_T0086411.1 MGP_NODShiLtJ_G0032848.1 mouse_genomes_project 7 142721816 142727901 + MGP_NODShiLtJ_P0086411 protein_coding protein_coding MGP_NODShiLtJ_T0086412.1 MGP_NODShiLtJ_G0032848.1 mouse_genomes_project 7 142722003 142725933 + protein_coding retained_intron MGP_NODShiLtJ_T0086413.1 MGP_NODShiLtJ_G0032848.1 mouse_genomes_project 7 142722236 142726115 + MGP_NODShiLtJ_P0086413 protein_coding protein_coding MGP_NODShiLtJ_T0086414.1 MGP_NODShiLtJ_G0032848.1 mouse_genomes_project 7 142722242 142726525 + MGP_NODShiLtJ_P0086414 protein_coding protein_coding MGP_NODShiLtJ_T0086415.1 MGP_NODShiLtJ_G0032848.1 mouse_genomes_project 7 142723443 142728099 + protein_coding retained_intron MGP_NODShiLtJ_T0086416.1 MGP_NODShiLtJ_G0032848.1 mouse_genomes_project 7 142723657 142724548 + protein_coding retained_intron MGP_NODShiLtJ_T0083697.1 MGP_NODShiLtJ_G0032111.1 mouse_genomes_project 7 52555559 52570194 + Zdhhc13 protein_coding processed_transcript MGP_NODShiLtJ_T0083698.1 MGP_NODShiLtJ_G0032111.1 mouse_genomes_project 7 52555638 52594708 + MGP_NODShiLtJ_P0083698 Zdhhc13 protein_coding protein_coding MGP_NODShiLtJ_T0015762.1 MGP_NODShiLtJ_G0013870.1 mouse_genomes_project 7 110634656 110635020 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081740.1 MGP_NODShiLtJ_G0031626.1 mouse_genomes_project 7 23596628 23597450 + MGP_NODShiLtJ_P0081740 protein_coding protein_coding MGP_NODShiLtJ_T0085768.1 MGP_NODShiLtJ_G0032720.1 mouse_genomes_project 7 134076613 134095232 + MGP_NODShiLtJ_P0085768 Acsm5 protein_coding protein_coding MGP_NODShiLtJ_T0102209.1 MGP_NODShiLtJ_G0040375.1 mouse_genomes_project 7 117953074 117958769 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084461.1 MGP_NODShiLtJ_G0032262.1 mouse_genomes_project 7 91589613 91597050 + MGP_NODShiLtJ_P0084461 protein_coding protein_coding MGP_NODShiLtJ_T0085137.1 MGP_NODShiLtJ_G0032478.1 mouse_genomes_project 7 115922118 115923081 + MGP_NODShiLtJ_P0085137 Olfr619 protein_coding protein_coding MGP_NODShiLtJ_T0085400.1 MGP_NODShiLtJ_G0032620.1 mouse_genomes_project 7 121557857 121558955 - MGP_NODShiLtJ_P0085400 protein_coding protein_coding MGP_NODShiLtJ_T0081842.1 MGP_NODShiLtJ_G0031656.1 mouse_genomes_project 7 24515007 24533928 - MGP_NODShiLtJ_P0081842 Cd177 protein_coding protein_coding MGP_NODShiLtJ_T0081843.1 MGP_NODShiLtJ_G0031656.1 mouse_genomes_project 7 24516156 24524341 - Cd177 protein_coding retained_intron MGP_NODShiLtJ_T0002219.1 MGP_NODShiLtJ_G0002130.1 mouse_genomes_project 7 84297540 84298491 + TEC TEC MGP_NODShiLtJ_T0080856.1 MGP_NODShiLtJ_G0031336.1 mouse_genomes_project 7 572668 577002 + Cnot3 protein_coding retained_intron MGP_NODShiLtJ_T0080857.1 MGP_NODShiLtJ_G0031336.1 mouse_genomes_project 7 572690 588419 + Cnot3 protein_coding retained_intron MGP_NODShiLtJ_T0080858.1 MGP_NODShiLtJ_G0031336.1 mouse_genomes_project 7 572709 579253 + MGP_NODShiLtJ_P0080858 Cnot3 protein_coding protein_coding MGP_NODShiLtJ_T0080859.1 MGP_NODShiLtJ_G0031336.1 mouse_genomes_project 7 572752 588420 + MGP_NODShiLtJ_P0080859 Cnot3 protein_coding protein_coding MGP_NODShiLtJ_T0080860.1 MGP_NODShiLtJ_G0031336.1 mouse_genomes_project 7 578710 583229 + MGP_NODShiLtJ_P0080860 Cnot3 protein_coding protein_coding MGP_NODShiLtJ_T0080861.1 MGP_NODShiLtJ_G0031336.1 mouse_genomes_project 7 578972 586052 + MGP_NODShiLtJ_P0080861 Cnot3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080862.1 MGP_NODShiLtJ_G0031336.1 mouse_genomes_project 7 585500 588400 + Cnot3 protein_coding retained_intron MGP_NODShiLtJ_T0080863.1 MGP_NODShiLtJ_G0031336.1 mouse_genomes_project 7 586700 588400 + MGP_NODShiLtJ_P0080863 Cnot3 protein_coding protein_coding MGP_NODShiLtJ_T0081504.1 MGP_NODShiLtJ_G0031548.1 mouse_genomes_project 7 17770162 17783015 - MGP_NODShiLtJ_P0081504 protein_coding protein_coding MGP_NODShiLtJ_T0102093.1 MGP_NODShiLtJ_G0040260.1 mouse_genomes_project 7 13265541 13266559 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102184.1 MGP_NODShiLtJ_G0040350.1 mouse_genomes_project 7 95459881 95462734 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083198.1 MGP_NODShiLtJ_G0031978.1 mouse_genomes_project 7 47127064 47160967 + MGP_NODShiLtJ_P0083198 Lrrc4b protein_coding protein_coding MGP_NODShiLtJ_T0083199.1 MGP_NODShiLtJ_G0031978.1 mouse_genomes_project 7 47142476 47162959 + MGP_NODShiLtJ_P0083199 Lrrc4b protein_coding protein_coding MGP_NODShiLtJ_T0083200.1 MGP_NODShiLtJ_G0031978.1 mouse_genomes_project 7 47142728 47161013 + MGP_NODShiLtJ_P0083200 Lrrc4b protein_coding protein_coding MGP_NODShiLtJ_T0084563.1 MGP_NODShiLtJ_G0032308.1 mouse_genomes_project 7 100053426 100094606 - MGP_NODShiLtJ_P0084563 Ccdc81 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084564.1 MGP_NODShiLtJ_G0032308.1 mouse_genomes_project 7 100053667 100094595 - MGP_NODShiLtJ_P0084564 Ccdc81 protein_coding protein_coding MGP_NODShiLtJ_T0102075.1 MGP_NODShiLtJ_G0040242.1 mouse_genomes_project 7 10213211 10214463 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082353.1 MGP_NODShiLtJ_G0031785.1 mouse_genomes_project 7 29517277 29559162 - MGP_NODShiLtJ_P0082353 Ryr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082354.1 MGP_NODShiLtJ_G0031785.1 mouse_genomes_project 7 29517278 29646822 - MGP_NODShiLtJ_P0082354 Ryr1 protein_coding protein_coding MGP_NODShiLtJ_T0082355.1 MGP_NODShiLtJ_G0031785.1 mouse_genomes_project 7 29517282 29646822 - MGP_NODShiLtJ_P0082355 Ryr1 protein_coding protein_coding MGP_NODShiLtJ_T0082356.1 MGP_NODShiLtJ_G0031785.1 mouse_genomes_project 7 29559783 29646686 - MGP_NODShiLtJ_P0082356 Ryr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085339.1 MGP_NODShiLtJ_G0032573.1 mouse_genomes_project 7 118793087 118797515 - MGP_NODShiLtJ_P0085339 Mrpl17 protein_coding protein_coding MGP_NODShiLtJ_T0085340.1 MGP_NODShiLtJ_G0032573.1 mouse_genomes_project 7 118796093 118797374 - MGP_NODShiLtJ_P0085340 Mrpl17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085341.1 MGP_NODShiLtJ_G0032573.1 mouse_genomes_project 7 118796116 118797412 - Mrpl17 protein_coding retained_intron MGP_NODShiLtJ_T0085342.1 MGP_NODShiLtJ_G0032573.1 mouse_genomes_project 7 118796201 118797415 - Mrpl17 protein_coding processed_transcript MGP_NODShiLtJ_T0085343.1 MGP_NODShiLtJ_G0032573.1 mouse_genomes_project 7 118796557 118797444 - MGP_NODShiLtJ_P0085343 Mrpl17 protein_coding protein_coding MGP_NODShiLtJ_T0010833.1 MGP_NODShiLtJ_G0008966.1 mouse_genomes_project 7 160094416 160094505 - Mir7064 miRNA miRNA MGP_NODShiLtJ_T0085249.1 MGP_NODShiLtJ_G0032558.1 mouse_genomes_project 7 118355534 118359705 + MGP_NODShiLtJ_P0085249 Cnga4 protein_coding protein_coding MGP_NODShiLtJ_T0081472.1 MGP_NODShiLtJ_G0031533.1 mouse_genomes_project 7 15938781 15943887 + MGP_NODShiLtJ_P0081472 Ccdc8 protein_coding protein_coding MGP_NODShiLtJ_T0085197.1 MGP_NODShiLtJ_G0032519.1 mouse_genomes_project 7 117034094 117059665 - MGP_NODShiLtJ_P0085197 Trim30a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085198.1 MGP_NODShiLtJ_G0032519.1 mouse_genomes_project 7 117036420 117037697 - Trim30a protein_coding retained_intron MGP_NODShiLtJ_T0085199.1 MGP_NODShiLtJ_G0032519.1 mouse_genomes_project 7 117036445 117037391 - Trim30a protein_coding processed_transcript MGP_NODShiLtJ_T0085200.1 MGP_NODShiLtJ_G0032519.1 mouse_genomes_project 7 117036760 117037343 - Trim30a protein_coding retained_intron MGP_NODShiLtJ_T0008820.1 MGP_NODShiLtJ_G0007114.1 mouse_genomes_project 7 77271086 77271890 - Gm29327 lincRNA lincRNA MGP_NODShiLtJ_T0082297.1 MGP_NODShiLtJ_G0031774.1 mouse_genomes_project 7 29236652 29245042 - MGP_NODShiLtJ_P0082297 Nfkbib protein_coding protein_coding MGP_NODShiLtJ_T0082298.1 MGP_NODShiLtJ_G0031774.1 mouse_genomes_project 7 29237433 29244916 - MGP_NODShiLtJ_P0082298 Nfkbib protein_coding protein_coding MGP_NODShiLtJ_T0082299.1 MGP_NODShiLtJ_G0031774.1 mouse_genomes_project 7 29240170 29245914 - MGP_NODShiLtJ_P0082299 Nfkbib protein_coding protein_coding MGP_NODShiLtJ_T0087446.1 MGP_NODShiLtJ_G0033077.1 mouse_genomes_project 7 159605987 159649331 + MGP_NODShiLtJ_P0087446 Kcnq1 protein_coding protein_coding MGP_NODShiLtJ_T0087447.1 MGP_NODShiLtJ_G0033077.1 mouse_genomes_project 7 159606140 159649331 + MGP_NODShiLtJ_P0087447 Kcnq1 protein_coding protein_coding MGP_NODShiLtJ_T0087448.1 MGP_NODShiLtJ_G0033077.1 mouse_genomes_project 7 159606370 159649331 + MGP_NODShiLtJ_P0087448 Kcnq1 protein_coding protein_coding MGP_NODShiLtJ_T0087449.1 MGP_NODShiLtJ_G0033077.1 mouse_genomes_project 7 159606879 159943314 + MGP_NODShiLtJ_P0087449 Kcnq1 protein_coding protein_coding MGP_NODShiLtJ_T0087450.1 MGP_NODShiLtJ_G0033077.1 mouse_genomes_project 7 159607176 159942396 + MGP_NODShiLtJ_P0087450 Kcnq1 protein_coding protein_coding MGP_NODShiLtJ_T0087451.1 MGP_NODShiLtJ_G0033077.1 mouse_genomes_project 7 159607976 159649331 + MGP_NODShiLtJ_P0087451 Kcnq1 protein_coding protein_coding MGP_NODShiLtJ_T0087452.1 MGP_NODShiLtJ_G0033077.1 mouse_genomes_project 7 159608819 159649331 + MGP_NODShiLtJ_P0087452 Kcnq1 protein_coding protein_coding MGP_NODShiLtJ_T0102198.1 MGP_NODShiLtJ_G0040364.1 mouse_genomes_project 7 115980579 116147372 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085239.1 MGP_NODShiLtJ_G0032555.1 mouse_genomes_project 7 118315680 118316806 + MGP_NODShiLtJ_P0085239 protein_coding protein_coding MGP_NODShiLtJ_T0084526.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97037921 97114891 + MGP_NODShiLtJ_P0084526 protein_coding protein_coding MGP_NODShiLtJ_T0084527.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038471 97240900 + MGP_NODShiLtJ_P0084527 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084528.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038476 97118229 + protein_coding retained_intron MGP_NODShiLtJ_T0084529.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038476 97084378 + protein_coding processed_transcript MGP_NODShiLtJ_T0084530.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038476 97240892 + MGP_NODShiLtJ_P0084530 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084531.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038476 97234548 + MGP_NODShiLtJ_P0084531 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084532.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038476 97240892 + MGP_NODShiLtJ_P0084532 protein_coding protein_coding MGP_NODShiLtJ_T0084533.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038476 97238045 + MGP_NODShiLtJ_P0084533 protein_coding protein_coding MGP_NODShiLtJ_T0084534.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038495 97240900 + MGP_NODShiLtJ_P0084534 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084535.1 MGP_NODShiLtJ_G0032298.1 mouse_genomes_project 7 97038639 97240522 + MGP_NODShiLtJ_P0084535 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083134.1 MGP_NODShiLtJ_G0031961.1 mouse_genomes_project 7 46409941 46416306 + MGP_NODShiLtJ_P0083134 Klk11 protein_coding protein_coding MGP_NODShiLtJ_T0083135.1 MGP_NODShiLtJ_G0031961.1 mouse_genomes_project 7 46413371 46415996 + Klk11 protein_coding retained_intron MGP_NODShiLtJ_T0083136.1 MGP_NODShiLtJ_G0031961.1 mouse_genomes_project 7 46413371 46416301 + MGP_NODShiLtJ_P0083136 Klk11 protein_coding protein_coding MGP_NODShiLtJ_T0083137.1 MGP_NODShiLtJ_G0031961.1 mouse_genomes_project 7 46413522 46416103 + Klk11 protein_coding processed_transcript MGP_NODShiLtJ_T0083138.1 MGP_NODShiLtJ_G0031961.1 mouse_genomes_project 7 46413522 46416103 + Klk11 protein_coding processed_transcript MGP_NODShiLtJ_T0086399.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142706700 142713088 + MGP_NODShiLtJ_P0086399 Prr14 protein_coding protein_coding MGP_NODShiLtJ_T0086400.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142707351 142710187 + MGP_NODShiLtJ_P0086400 Prr14 protein_coding protein_coding MGP_NODShiLtJ_T0086401.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142707361 142710050 + MGP_NODShiLtJ_P0086401 Prr14 protein_coding protein_coding MGP_NODShiLtJ_T0086402.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142707384 142710158 + Prr14 protein_coding retained_intron MGP_NODShiLtJ_T0086403.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142707781 142709437 + Prr14 protein_coding retained_intron MGP_NODShiLtJ_T0086404.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142707822 142713087 + MGP_NODShiLtJ_P0086404 Prr14 protein_coding protein_coding MGP_NODShiLtJ_T0086405.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142708233 142711541 + Prr14 protein_coding retained_intron MGP_NODShiLtJ_T0086406.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142709955 142711599 + MGP_NODShiLtJ_P0086406 Prr14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086407.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142711829 142713086 + Prr14 protein_coding retained_intron MGP_NODShiLtJ_T0086408.1 MGP_NODShiLtJ_G0032847.1 mouse_genomes_project 7 142711847 142713084 + MGP_NODShiLtJ_P0086408 Prr14 protein_coding protein_coding MGP_NODShiLtJ_T0085126.1 MGP_NODShiLtJ_G0032467.1 mouse_genomes_project 7 115710658 115711618 + MGP_NODShiLtJ_P0085126 Olfr606 protein_coding protein_coding MGP_NODShiLtJ_T0015755.1 MGP_NODShiLtJ_G0013863.1 mouse_genomes_project 7 109250702 109251412 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102165.1 MGP_NODShiLtJ_G0040331.1 mouse_genomes_project 7 93487865 93492847 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002182.1 MGP_NODShiLtJ_G0002094.1 mouse_genomes_project 7 53010372 53013952 + TEC TEC MGP_NODShiLtJ_T0081492.1 MGP_NODShiLtJ_G0031539.1 mouse_genomes_project 7 16783502 16852813 + MGP_NODShiLtJ_P0081492 Ceacam5 protein_coding protein_coding MGP_NODShiLtJ_T0082486.1 MGP_NODShiLtJ_G0031817.1 mouse_genomes_project 7 30799826 30810151 + MGP_NODShiLtJ_P0082486 Gm5113 protein_coding protein_coding MGP_NODShiLtJ_T0008893.1 MGP_NODShiLtJ_G0007164.1 mouse_genomes_project 7 110447507 110472459 - Gm15506 lincRNA lincRNA MGP_NODShiLtJ_T0010772.1 MGP_NODShiLtJ_G0008905.1 mouse_genomes_project 7 67678248 67678317 - Mir344d-1 miRNA miRNA MGP_NODShiLtJ_T0102180.1 MGP_NODShiLtJ_G0040346.1 mouse_genomes_project 7 95073140 95074382 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085822.1 MGP_NODShiLtJ_G0032734.1 mouse_genomes_project 7 134807736 134826138 - MGP_NODShiLtJ_P0085822 Crym protein_coding protein_coding MGP_NODShiLtJ_T0085823.1 MGP_NODShiLtJ_G0032734.1 mouse_genomes_project 7 134820038 134826138 - Crym protein_coding retained_intron MGP_NODShiLtJ_T0081601.1 MGP_NODShiLtJ_G0031577.1 mouse_genomes_project 7 18660136 18676319 + MGP_NODShiLtJ_P0081601 Rtn2 protein_coding protein_coding MGP_NODShiLtJ_T0081602.1 MGP_NODShiLtJ_G0031577.1 mouse_genomes_project 7 18671312 18676314 + MGP_NODShiLtJ_P0081602 Rtn2 protein_coding protein_coding MGP_NODShiLtJ_T0081473.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15951024 15975437 - MGP_NODShiLtJ_P0081473 Ppp5c protein_coding protein_coding MGP_NODShiLtJ_T0081474.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15951487 15953459 - Ppp5c protein_coding retained_intron MGP_NODShiLtJ_T0081475.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15953528 15961846 - Ppp5c protein_coding retained_intron MGP_NODShiLtJ_T0081476.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15954162 15975548 - Ppp5c protein_coding processed_transcript MGP_NODShiLtJ_T0081477.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15954171 15955557 - Ppp5c protein_coding retained_intron MGP_NODShiLtJ_T0081478.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15954965 15975518 - Ppp5c protein_coding processed_transcript MGP_NODShiLtJ_T0081479.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15954989 15956522 - Ppp5c protein_coding retained_intron MGP_NODShiLtJ_T0081480.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15956324 15972370 - Ppp5c protein_coding processed_transcript MGP_NODShiLtJ_T0081481.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15961838 15975239 - Ppp5c protein_coding processed_transcript MGP_NODShiLtJ_T0081482.1 MGP_NODShiLtJ_G0031534.1 mouse_genomes_project 7 15969996 15975413 - Ppp5c protein_coding processed_transcript MGP_NODShiLtJ_T0086073.1 MGP_NODShiLtJ_G0032787.1 mouse_genomes_project 7 141553653 141571523 + Rabep2 protein_coding retained_intron MGP_NODShiLtJ_T0086074.1 MGP_NODShiLtJ_G0032787.1 mouse_genomes_project 7 141553993 141561728 + Rabep2 protein_coding retained_intron MGP_NODShiLtJ_T0086075.1 MGP_NODShiLtJ_G0032787.1 mouse_genomes_project 7 141554026 141571531 + MGP_NODShiLtJ_P0086075 Rabep2 protein_coding protein_coding MGP_NODShiLtJ_T0086076.1 MGP_NODShiLtJ_G0032787.1 mouse_genomes_project 7 141554276 141564011 + MGP_NODShiLtJ_P0086076 Rabep2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086077.1 MGP_NODShiLtJ_G0032787.1 mouse_genomes_project 7 141554322 141564002 + MGP_NODShiLtJ_P0086077 Rabep2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086078.1 MGP_NODShiLtJ_G0032787.1 mouse_genomes_project 7 141563770 141564334 + Rabep2 protein_coding retained_intron MGP_NODShiLtJ_T0086079.1 MGP_NODShiLtJ_G0032787.1 mouse_genomes_project 7 141565887 141570306 + Rabep2 protein_coding retained_intron MGP_NODShiLtJ_T0086080.1 MGP_NODShiLtJ_G0032787.1 mouse_genomes_project 7 141570421 141574867 + Rabep2 protein_coding retained_intron MGP_NODShiLtJ_T0083444.1 MGP_NODShiLtJ_G0032035.1 mouse_genomes_project 7 48213360 48218780 + MGP_NODShiLtJ_P0083444 Kcna7 protein_coding protein_coding MGP_NODShiLtJ_T0010752.1 MGP_NODShiLtJ_G0008885.1 mouse_genomes_project 7 30723039 30723135 - Gm23368 miRNA miRNA MGP_NODShiLtJ_T0085145.1 MGP_NODShiLtJ_G0032485.1 mouse_genomes_project 7 116197578 116199013 - MGP_NODShiLtJ_P0085145 Olfr69 protein_coding protein_coding MGP_NODShiLtJ_T0082459.1 MGP_NODShiLtJ_G0031808.1 mouse_genomes_project 7 30555365 30557724 + MGP_NODShiLtJ_P0082459 protein_coding protein_coding MGP_NODShiLtJ_T0083676.1 MGP_NODShiLtJ_G0032096.1 mouse_genomes_project 7 49964053 49982848 - MGP_NODShiLtJ_P0083676 Spty2d1 protein_coding protein_coding MGP_NODShiLtJ_T0085254.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528037 118553503 - MGP_NODShiLtJ_P0085254 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085255.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528038 118553130 - MGP_NODShiLtJ_P0085255 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085256.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528038 118540066 - MGP_NODShiLtJ_P0085256 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085257.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528038 118540282 - MGP_NODShiLtJ_P0085257 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085258.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528038 118539546 - MGP_NODShiLtJ_P0085258 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085259.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528040 118553085 - MGP_NODShiLtJ_P0085259 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085260.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528041 118539725 - Apbb1 protein_coding retained_intron MGP_NODShiLtJ_T0085261.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528057 118553341 - MGP_NODShiLtJ_P0085261 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085262.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528077 118540061 - MGP_NODShiLtJ_P0085262 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085263.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528372 118539546 - MGP_NODShiLtJ_P0085263 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085264.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118528713 118534889 - Apbb1 protein_coding retained_intron MGP_NODShiLtJ_T0085265.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118529020 118536678 - Apbb1 protein_coding retained_intron MGP_NODShiLtJ_T0085266.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118534973 118553044 - MGP_NODShiLtJ_P0085266 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085267.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118535490 118539732 - MGP_NODShiLtJ_P0085267 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085268.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118535933 118540034 - MGP_NODShiLtJ_P0085268 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085269.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118536048 118540042 - MGP_NODShiLtJ_P0085269 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085270.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118536477 118540361 - MGP_NODShiLtJ_P0085270 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0085271.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118536551 118539439 - Apbb1 protein_coding retained_intron MGP_NODShiLtJ_T0085272.1 MGP_NODShiLtJ_G0032562.1 mouse_genomes_project 7 118545762 118553040 - MGP_NODShiLtJ_P0085272 Apbb1 protein_coding protein_coding MGP_NODShiLtJ_T0083848.1 MGP_NODShiLtJ_G0032147.1 mouse_genomes_project 7 69416536 69547167 - MGP_NODShiLtJ_P0083848 Chrna7 protein_coding protein_coding MGP_NODShiLtJ_T0083461.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48315614 48353894 + MGP_NODShiLtJ_P0083461 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083462.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48315615 48353347 + MGP_NODShiLtJ_P0083462 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083463.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48315716 48353349 + MGP_NODShiLtJ_P0083463 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083473.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48344686 48353561 + MGP_NODShiLtJ_P0083473 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083474.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48344704 48353354 + MGP_NODShiLtJ_P0083474 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083475.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48345561 48347668 + MGP_NODShiLtJ_P0083475 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083476.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48345582 48353349 + MGP_NODShiLtJ_P0083476 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083477.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48345586 48348922 + MGP_NODShiLtJ_P0083477 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083478.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48345617 48354599 + MGP_NODShiLtJ_P0083478 Tulp2 protein_coding protein_coding MGP_NODShiLtJ_T0083479.1 MGP_NODShiLtJ_G0032043.1 mouse_genomes_project 7 48346788 48347301 + Tulp2 protein_coding processed_transcript MGP_NODShiLtJ_T0081388.1 MGP_NODShiLtJ_G0031511.1 mouse_genomes_project 7 15104122 15118742 - MGP_NODShiLtJ_P0081388 C5ar1 protein_coding protein_coding MGP_NODShiLtJ_T0081389.1 MGP_NODShiLtJ_G0031511.1 mouse_genomes_project 7 15104124 15118540 - MGP_NODShiLtJ_P0081389 C5ar1 protein_coding protein_coding MGP_NODShiLtJ_T0018211.1 MGP_NODShiLtJ_G0015536.1 mouse_genomes_project 7 60907712 60919426 + A230056P14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018212.1 MGP_NODShiLtJ_G0015536.1 mouse_genomes_project 7 60907712 60927242 + A230056P14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0081309.1 MGP_NODShiLtJ_G0031480.1 mouse_genomes_project 7 11702546 11713298 + MGP_NODShiLtJ_P0081309 Cabp5 protein_coding protein_coding MGP_NODShiLtJ_T0081310.1 MGP_NODShiLtJ_G0031480.1 mouse_genomes_project 7 11702709 11710707 + MGP_NODShiLtJ_P0081310 Cabp5 protein_coding protein_coding MGP_NODShiLtJ_T0081311.1 MGP_NODShiLtJ_G0031480.1 mouse_genomes_project 7 11702722 11709958 + MGP_NODShiLtJ_P0081311 Cabp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005228.1 MGP_NODShiLtJ_G0004430.1 mouse_genomes_project 7 136799017 136806346 + Gm44987 antisense antisense MGP_NODShiLtJ_T0085994.1 MGP_NODShiLtJ_G0032773.1 mouse_genomes_project 7 138946014 139386194 + MGP_NODShiLtJ_P0085994 Hs3st4 protein_coding protein_coding MGP_NODShiLtJ_T0084660.1 MGP_NODShiLtJ_G0032333.1 mouse_genomes_project 7 109100822 109109900 + MGP_NODShiLtJ_P0084660 Kctd14 protein_coding protein_coding MGP_NODShiLtJ_T0084661.1 MGP_NODShiLtJ_G0032333.1 mouse_genomes_project 7 109102703 109109896 + MGP_NODShiLtJ_P0084661 Kctd14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084662.1 MGP_NODShiLtJ_G0032333.1 mouse_genomes_project 7 109102703 109109899 + MGP_NODShiLtJ_P0084662 Kctd14 protein_coding protein_coding MGP_NODShiLtJ_T0084663.1 MGP_NODShiLtJ_G0032333.1 mouse_genomes_project 7 109102703 109109899 + MGP_NODShiLtJ_P0084663 Kctd14 protein_coding protein_coding MGP_NODShiLtJ_T0084664.1 MGP_NODShiLtJ_G0032333.1 mouse_genomes_project 7 109102703 109107806 + MGP_NODShiLtJ_P0084664 Kctd14 protein_coding protein_coding MGP_NODShiLtJ_T0084665.1 MGP_NODShiLtJ_G0032333.1 mouse_genomes_project 7 109102721 109109898 + MGP_NODShiLtJ_P0084665 Kctd14 protein_coding protein_coding MGP_NODShiLtJ_T0005213.1 MGP_NODShiLtJ_G0004421.1 mouse_genomes_project 7 126419504 126428213 - Parvaos antisense antisense MGP_NODShiLtJ_T0082031.1 MGP_NODShiLtJ_G0031697.1 mouse_genomes_project 7 26061577 26113553 + MGP_NODShiLtJ_P0082031 Cyp2b9 protein_coding protein_coding MGP_NODShiLtJ_T0008883.1 MGP_NODShiLtJ_G0007156.1 mouse_genomes_project 7 103329493 103337107 + Gm26944 lincRNA lincRNA MGP_NODShiLtJ_T0081716.1 MGP_NODShiLtJ_G0031607.1 mouse_genomes_project 7 19296032 19305106 - MGP_NODShiLtJ_P0081716 Ceacam16 protein_coding protein_coding MGP_NODShiLtJ_T0084799.1 MGP_NODShiLtJ_G0032362.1 mouse_genomes_project 7 111482436 111537515 - MGP_NODShiLtJ_P0084799 Slco2b1 protein_coding protein_coding MGP_NODShiLtJ_T0084800.1 MGP_NODShiLtJ_G0032362.1 mouse_genomes_project 7 111483022 111522011 - MGP_NODShiLtJ_P0084800 Slco2b1 protein_coding protein_coding MGP_NODShiLtJ_T0084801.1 MGP_NODShiLtJ_G0032362.1 mouse_genomes_project 7 111483022 111533319 - MGP_NODShiLtJ_P0084801 Slco2b1 protein_coding protein_coding MGP_NODShiLtJ_T0084802.1 MGP_NODShiLtJ_G0032362.1 mouse_genomes_project 7 111484490 111489607 - MGP_NODShiLtJ_P0084802 Slco2b1 protein_coding protein_coding MGP_NODShiLtJ_T0084803.1 MGP_NODShiLtJ_G0032362.1 mouse_genomes_project 7 111514734 111521830 - MGP_NODShiLtJ_P0084803 Slco2b1 protein_coding protein_coding MGP_NODShiLtJ_T0084804.1 MGP_NODShiLtJ_G0032362.1 mouse_genomes_project 7 111516335 111521784 - MGP_NODShiLtJ_P0084804 Slco2b1 protein_coding protein_coding MGP_NODShiLtJ_T0083069.1 MGP_NODShiLtJ_G0031939.1 mouse_genomes_project 7 45942164 45950256 + Siglecf protein_coding retained_intron MGP_NODShiLtJ_T0083070.1 MGP_NODShiLtJ_G0031939.1 mouse_genomes_project 7 45942164 45950258 + MGP_NODShiLtJ_P0083070 Siglecf protein_coding protein_coding MGP_NODShiLtJ_T0083071.1 MGP_NODShiLtJ_G0031939.1 mouse_genomes_project 7 45942206 45942667 + Siglecf protein_coding processed_transcript MGP_NODShiLtJ_T0083072.1 MGP_NODShiLtJ_G0031939.1 mouse_genomes_project 7 45942231 45950319 + MGP_NODShiLtJ_P0083072 Siglecf protein_coding protein_coding MGP_NODShiLtJ_T0083073.1 MGP_NODShiLtJ_G0031939.1 mouse_genomes_project 7 45942345 45950077 + MGP_NODShiLtJ_P0083073 Siglecf protein_coding protein_coding MGP_NODShiLtJ_T0083074.1 MGP_NODShiLtJ_G0031939.1 mouse_genomes_project 7 45942371 45947406 + MGP_NODShiLtJ_P0083074 Siglecf protein_coding protein_coding MGP_NODShiLtJ_T0087110.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157437925 157471459 + MGP_NODShiLtJ_P0087110 Ptdss2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087111.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157446982 157469994 + MGP_NODShiLtJ_P0087111 Ptdss2 protein_coding protein_coding MGP_NODShiLtJ_T0087112.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157447004 157469826 + MGP_NODShiLtJ_P0087112 Ptdss2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087113.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157448012 157474024 + MGP_NODShiLtJ_P0087113 Ptdss2 protein_coding protein_coding MGP_NODShiLtJ_T0087114.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157448027 157471326 + Ptdss2 protein_coding retained_intron MGP_NODShiLtJ_T0087115.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157448070 157460677 + Ptdss2 protein_coding processed_transcript MGP_NODShiLtJ_T0087116.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157448082 157460177 + MGP_NODShiLtJ_P0087116 Ptdss2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087117.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157449164 157464124 + MGP_NODShiLtJ_P0087117 Ptdss2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087118.1 MGP_NODShiLtJ_G0033019.1 mouse_genomes_project 7 157449279 157460706 + Ptdss2 protein_coding processed_transcript MGP_NODShiLtJ_T0099476.1 MGP_NODShiLtJ_G0037870.1 mouse_genomes_project 7 17761898 17762005 + Gm26062 snRNA snRNA MGP_NODShiLtJ_T0083841.1 MGP_NODShiLtJ_G0032141.1 mouse_genomes_project 7 65257701 65296207 - MGP_NODShiLtJ_P0083841 Snrpn protein_coding protein_coding MGP_NODShiLtJ_T0083842.1 MGP_NODShiLtJ_G0032141.1 mouse_genomes_project 7 65257708 65450652 - MGP_NODShiLtJ_P0083842 Snrpn protein_coding protein_coding MGP_NODShiLtJ_T0008890.1 MGP_NODShiLtJ_G0007161.1 mouse_genomes_project 7 105499434 105502023 - Gm44601 lincRNA lincRNA MGP_NODShiLtJ_T0081116.1 MGP_NODShiLtJ_G0031397.1 mouse_genomes_project 7 2330722 2331735 - MGP_NODShiLtJ_P0081116 Rasl2-9 protein_coding protein_coding MGP_NODShiLtJ_T0082895.1 MGP_NODShiLtJ_G0031898.1 mouse_genomes_project 7 36254803 36265089 - MGP_NODShiLtJ_P0082895 Cebpg protein_coding protein_coding MGP_NODShiLtJ_T0082896.1 MGP_NODShiLtJ_G0031898.1 mouse_genomes_project 7 36258328 36259938 - Cebpg protein_coding retained_intron MGP_NODShiLtJ_T0082897.1 MGP_NODShiLtJ_G0031898.1 mouse_genomes_project 7 36258747 36264380 - MGP_NODShiLtJ_P0082897 Cebpg protein_coding protein_coding MGP_NODShiLtJ_T0082898.1 MGP_NODShiLtJ_G0031898.1 mouse_genomes_project 7 36259297 36264423 - Cebpg protein_coding processed_transcript MGP_NODShiLtJ_T0081045.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1879846 1881027 - MGP_NODShiLtJ_P0081045 Cox6b2 protein_coding protein_coding MGP_NODShiLtJ_T0081046.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1879846 1881078 - MGP_NODShiLtJ_P0081046 Cox6b2 protein_coding protein_coding MGP_NODShiLtJ_T0081047.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1879846 1881078 - MGP_NODShiLtJ_P0081047 Cox6b2 protein_coding protein_coding MGP_NODShiLtJ_T0081048.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1879846 1881149 - MGP_NODShiLtJ_P0081048 Cox6b2 protein_coding protein_coding MGP_NODShiLtJ_T0081049.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1879848 1881064 - MGP_NODShiLtJ_P0081049 Cox6b2 protein_coding protein_coding MGP_NODShiLtJ_T0081050.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1879849 1881078 - MGP_NODShiLtJ_P0081050 Cox6b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081051.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1879909 1881093 - MGP_NODShiLtJ_P0081051 Cox6b2 protein_coding protein_coding MGP_NODShiLtJ_T0081052.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1879979 1880583 - Cox6b2 protein_coding retained_intron MGP_NODShiLtJ_T0081053.1 MGP_NODShiLtJ_G0031369.1 mouse_genomes_project 7 1880001 1881057 - MGP_NODShiLtJ_P0081053 Cox6b2 protein_coding protein_coding MGP_NODShiLtJ_T0015569.1 MGP_NODShiLtJ_G0013677.1 mouse_genomes_project 7 3313093 3313540 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099516.1 MGP_NODShiLtJ_G0037910.1 mouse_genomes_project 7 132739066 132739171 + Gm23229 snRNA snRNA MGP_NODShiLtJ_T0082430.1 MGP_NODShiLtJ_G0031799.1 mouse_genomes_project 7 30266711 30283006 - MGP_NODShiLtJ_P0082430 protein_coding protein_coding MGP_NODShiLtJ_T0082431.1 MGP_NODShiLtJ_G0031799.1 mouse_genomes_project 7 30266966 30287578 - protein_coding retained_intron MGP_NODShiLtJ_T0008954.1 MGP_NODShiLtJ_G0007200.1 mouse_genomes_project 7 143276457 143278769 - Gm26690 lincRNA lincRNA MGP_NODShiLtJ_T0010799.1 MGP_NODShiLtJ_G0008932.1 mouse_genomes_project 7 89833086 89833159 + Mir1839 miRNA miRNA MGP_NODShiLtJ_T0083759.1 MGP_NODShiLtJ_G0032127.1 mouse_genomes_project 7 59551756 60071173 + Luzp2 protein_coding retained_intron MGP_NODShiLtJ_T0083760.1 MGP_NODShiLtJ_G0032127.1 mouse_genomes_project 7 59551873 60093672 + MGP_NODShiLtJ_P0083760 Luzp2 protein_coding protein_coding MGP_NODShiLtJ_T0083761.1 MGP_NODShiLtJ_G0032127.1 mouse_genomes_project 7 59857315 60089898 + MGP_NODShiLtJ_P0083761 Luzp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010815.1 MGP_NODShiLtJ_G0008948.1 mouse_genomes_project 7 142220603 142220693 - Gm44343 miRNA miRNA MGP_NODShiLtJ_T0087023.1 MGP_NODShiLtJ_G0032981.1 mouse_genomes_project 7 156513631 156514609 + MGP_NODShiLtJ_P0087023 Olfr527 protein_coding protein_coding MGP_NODShiLtJ_T0082960.1 MGP_NODShiLtJ_G0031911.1 mouse_genomes_project 7 36925602 36931136 - MGP_NODShiLtJ_P0082960 Pdcd5 protein_coding protein_coding MGP_NODShiLtJ_T0082961.1 MGP_NODShiLtJ_G0031911.1 mouse_genomes_project 7 36925632 36930824 - MGP_NODShiLtJ_P0082961 Pdcd5 protein_coding protein_coding MGP_NODShiLtJ_T0082962.1 MGP_NODShiLtJ_G0031911.1 mouse_genomes_project 7 36925634 36926666 - Pdcd5 protein_coding retained_intron MGP_NODShiLtJ_T0082963.1 MGP_NODShiLtJ_G0031911.1 mouse_genomes_project 7 36925636 36927477 - Pdcd5 protein_coding retained_intron MGP_NODShiLtJ_T0082964.1 MGP_NODShiLtJ_G0031911.1 mouse_genomes_project 7 36927443 36931119 - Pdcd5 protein_coding retained_intron MGP_NODShiLtJ_T0082965.1 MGP_NODShiLtJ_G0031911.1 mouse_genomes_project 7 36927808 36931095 - Pdcd5 protein_coding retained_intron MGP_NODShiLtJ_T0082966.1 MGP_NODShiLtJ_G0031911.1 mouse_genomes_project 7 36929288 36931081 - Pdcd5 protein_coding retained_intron MGP_NODShiLtJ_T0084573.1 MGP_NODShiLtJ_G0032312.1 mouse_genomes_project 7 100355243 100455403 + MGP_NODShiLtJ_P0084573 Picalm protein_coding protein_coding MGP_NODShiLtJ_T0084574.1 MGP_NODShiLtJ_G0032312.1 mouse_genomes_project 7 100357599 100395141 + MGP_NODShiLtJ_P0084574 Picalm protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084575.1 MGP_NODShiLtJ_G0032312.1 mouse_genomes_project 7 100405706 100454142 + MGP_NODShiLtJ_P0084575 Picalm protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018277.1 MGP_NODShiLtJ_G0015569.1 mouse_genomes_project 7 159521468 159553058 - R74862 processed_transcript processed_transcript MGP_NODShiLtJ_T0018278.1 MGP_NODShiLtJ_G0015569.1 mouse_genomes_project 7 159532305 159553327 - R74862 processed_transcript processed_transcript MGP_NODShiLtJ_T0018279.1 MGP_NODShiLtJ_G0015569.1 mouse_genomes_project 7 159532968 159553318 - R74862 processed_transcript processed_transcript MGP_NODShiLtJ_T0085464.1 MGP_NODShiLtJ_G0032656.1 mouse_genomes_project 7 123414960 123439769 - MGP_NODShiLtJ_P0085464 Nrip3 protein_coding protein_coding MGP_NODShiLtJ_T0085465.1 MGP_NODShiLtJ_G0032656.1 mouse_genomes_project 7 123414964 123439289 - MGP_NODShiLtJ_P0085465 Nrip3 protein_coding protein_coding MGP_NODShiLtJ_T0085146.1 MGP_NODShiLtJ_G0032486.1 mouse_genomes_project 7 116198102 116210048 - MGP_NODShiLtJ_P0085146 Olfr68 protein_coding protein_coding MGP_NODShiLtJ_T0015759.1 MGP_NODShiLtJ_G0013867.1 mouse_genomes_project 7 110193348 110193662 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085824.1 MGP_NODShiLtJ_G0032735.1 mouse_genomes_project 7 134827987 134874637 + Abca14 protein_coding processed_transcript MGP_NODShiLtJ_T0085825.1 MGP_NODShiLtJ_G0032735.1 mouse_genomes_project 7 134827990 134975833 + MGP_NODShiLtJ_P0085825 Abca14 protein_coding protein_coding MGP_NODShiLtJ_T0085826.1 MGP_NODShiLtJ_G0032735.1 mouse_genomes_project 7 134828030 134837043 + Abca14 protein_coding retained_intron MGP_NODShiLtJ_T0085827.1 MGP_NODShiLtJ_G0032735.1 mouse_genomes_project 7 134828033 134841426 + Abca14 protein_coding processed_transcript MGP_NODShiLtJ_T0086971.1 MGP_NODShiLtJ_G0032964.1 mouse_genomes_project 7 156131703 156145705 - Adam8 protein_coding retained_intron MGP_NODShiLtJ_T0086972.1 MGP_NODShiLtJ_G0032964.1 mouse_genomes_project 7 156131703 156141594 - Adam8 protein_coding retained_intron MGP_NODShiLtJ_T0086973.1 MGP_NODShiLtJ_G0032964.1 mouse_genomes_project 7 156131703 156145705 - MGP_NODShiLtJ_P0086973 Adam8 protein_coding protein_coding MGP_NODShiLtJ_T0086974.1 MGP_NODShiLtJ_G0032964.1 mouse_genomes_project 7 156131703 156145691 - MGP_NODShiLtJ_P0086974 Adam8 protein_coding protein_coding MGP_NODShiLtJ_T0086975.1 MGP_NODShiLtJ_G0032964.1 mouse_genomes_project 7 156132165 156133140 - Adam8 protein_coding processed_transcript MGP_NODShiLtJ_T0086976.1 MGP_NODShiLtJ_G0032964.1 mouse_genomes_project 7 156137013 156145705 - MGP_NODShiLtJ_P0086976 Adam8 protein_coding protein_coding MGP_NODShiLtJ_T0086977.1 MGP_NODShiLtJ_G0032964.1 mouse_genomes_project 7 156140813 156141590 - Adam8 protein_coding processed_transcript MGP_NODShiLtJ_T0086978.1 MGP_NODShiLtJ_G0032964.1 mouse_genomes_project 7 156142578 156145651 - MGP_NODShiLtJ_P0086978 Adam8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015804.1 MGP_NODShiLtJ_G0013912.1 mouse_genomes_project 7 143439416 143439763 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084245.1 MGP_NODShiLtJ_G0032223.1 mouse_genomes_project 7 88441219 88456768 + MGP_NODShiLtJ_P0084245 Ttll13 protein_coding protein_coding MGP_NODShiLtJ_T0084246.1 MGP_NODShiLtJ_G0032223.1 mouse_genomes_project 7 88441268 88441648 + Ttll13 protein_coding retained_intron MGP_NODShiLtJ_T0084247.1 MGP_NODShiLtJ_G0032223.1 mouse_genomes_project 7 88441398 88455143 + Ttll13 protein_coding retained_intron MGP_NODShiLtJ_T0084248.1 MGP_NODShiLtJ_G0032223.1 mouse_genomes_project 7 88441837 88448853 + Ttll13 protein_coding retained_intron MGP_NODShiLtJ_T0084249.1 MGP_NODShiLtJ_G0032223.1 mouse_genomes_project 7 88442231 88456617 + MGP_NODShiLtJ_P0084249 Ttll13 protein_coding protein_coding MGP_NODShiLtJ_T0084460.1 MGP_NODShiLtJ_G0032261.1 mouse_genomes_project 7 91278086 91282954 + MGP_NODShiLtJ_P0084460 Mex3b protein_coding protein_coding MGP_NODShiLtJ_T0086967.1 MGP_NODShiLtJ_G0032962.1 mouse_genomes_project 7 156094981 156096305 + MGP_NODShiLtJ_P0086967 Utf1 protein_coding protein_coding MGP_NODShiLtJ_T0081079.1 MGP_NODShiLtJ_G0031379.1 mouse_genomes_project 7 2102492 2109279 + MGP_NODShiLtJ_P0081079 Zfp628 protein_coding protein_coding MGP_NODShiLtJ_T0008720.1 MGP_NODShiLtJ_G0007036.1 mouse_genomes_project 7 404419 430280 + Gm44160 lincRNA lincRNA MGP_NODShiLtJ_T0081573.1 MGP_NODShiLtJ_G0031569.1 mouse_genomes_project 7 18497904 18508016 - MGP_NODShiLtJ_P0081573 Qpctl protein_coding protein_coding MGP_NODShiLtJ_T0081574.1 MGP_NODShiLtJ_G0031569.1 mouse_genomes_project 7 18501749 18506253 - Qpctl protein_coding retained_intron MGP_NODShiLtJ_T0082043.1 MGP_NODShiLtJ_G0031701.1 mouse_genomes_project 7 26677968 26680035 - MGP_NODShiLtJ_P0082043 protein_coding protein_coding MGP_NODShiLtJ_T0099515.1 MGP_NODShiLtJ_G0037909.1 mouse_genomes_project 7 131039111 131039218 - Gm25423 snRNA snRNA MGP_NODShiLtJ_T0018271.1 MGP_NODShiLtJ_G0015566.1 mouse_genomes_project 7 157798521 157803712 - Gm10575 processed_transcript processed_transcript MGP_NODShiLtJ_T0018272.1 MGP_NODShiLtJ_G0015566.1 mouse_genomes_project 7 157798523 157805975 - Gm10575 processed_transcript processed_transcript MGP_NODShiLtJ_T0018273.1 MGP_NODShiLtJ_G0015566.1 mouse_genomes_project 7 157798960 157802111 - Gm10575 processed_transcript processed_transcript MGP_NODShiLtJ_T0084899.1 MGP_NODShiLtJ_G0032388.1 mouse_genomes_project 7 112947253 112962884 - MGP_NODShiLtJ_P0084899 P2ry2 protein_coding protein_coding MGP_NODShiLtJ_T0084900.1 MGP_NODShiLtJ_G0032388.1 mouse_genomes_project 7 112947906 112962869 - MGP_NODShiLtJ_P0084900 P2ry2 protein_coding protein_coding MGP_NODShiLtJ_T0015558.1 MGP_NODShiLtJ_G0013666.1 mouse_genomes_project 7 1373364 1373729 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085455.1 MGP_NODShiLtJ_G0032652.1 mouse_genomes_project 7 123360056 123368560 + MGP_NODShiLtJ_P0085455 Akip1 protein_coding protein_coding MGP_NODShiLtJ_T0085456.1 MGP_NODShiLtJ_G0032652.1 mouse_genomes_project 7 123360118 123365341 + MGP_NODShiLtJ_P0085456 Akip1 protein_coding protein_coding MGP_NODShiLtJ_T0085457.1 MGP_NODShiLtJ_G0032652.1 mouse_genomes_project 7 123365200 123368339 + Akip1 protein_coding processed_transcript MGP_NODShiLtJ_T0015679.1 MGP_NODShiLtJ_G0013787.1 mouse_genomes_project 7 45615042 45615578 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081616.1 MGP_NODShiLtJ_G0031581.1 mouse_genomes_project 7 18747202 18748770 + Ppp1r13l protein_coding processed_transcript MGP_NODShiLtJ_T0081617.1 MGP_NODShiLtJ_G0031581.1 mouse_genomes_project 7 18747223 18757443 + MGP_NODShiLtJ_P0081617 Ppp1r13l protein_coding protein_coding MGP_NODShiLtJ_T0081618.1 MGP_NODShiLtJ_G0031581.1 mouse_genomes_project 7 18748099 18757439 + MGP_NODShiLtJ_P0081618 Ppp1r13l protein_coding protein_coding MGP_NODShiLtJ_T0081619.1 MGP_NODShiLtJ_G0031581.1 mouse_genomes_project 7 18748669 18767208 + MGP_NODShiLtJ_P0081619 Ppp1r13l protein_coding protein_coding MGP_NODShiLtJ_T0081620.1 MGP_NODShiLtJ_G0031581.1 mouse_genomes_project 7 18756020 18757417 + MGP_NODShiLtJ_P0081620 Ppp1r13l protein_coding protein_coding MGP_NODShiLtJ_T0083780.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60786841 60839716 + Cyfip1 protein_coding retained_intron MGP_NODShiLtJ_T0083781.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60787166 60881680 + MGP_NODShiLtJ_P0083781 Cyfip1 protein_coding protein_coding MGP_NODShiLtJ_T0083782.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60787167 60824218 + MGP_NODShiLtJ_P0083782 Cyfip1 protein_coding protein_coding MGP_NODShiLtJ_T0083783.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60787301 60879577 + MGP_NODShiLtJ_P0083783 Cyfip1 protein_coding protein_coding MGP_NODShiLtJ_T0083784.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60787345 60874875 + Cyfip1 protein_coding retained_intron MGP_NODShiLtJ_T0083785.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60787350 60879550 + MGP_NODShiLtJ_P0083785 Cyfip1 protein_coding protein_coding MGP_NODShiLtJ_T0083786.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60818122 60873049 + MGP_NODShiLtJ_P0083786 Cyfip1 protein_coding protein_coding MGP_NODShiLtJ_T0083787.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60846019 60850016 + Cyfip1 protein_coding retained_intron MGP_NODShiLtJ_T0083788.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60846348 60879577 + Cyfip1 protein_coding retained_intron MGP_NODShiLtJ_T0083789.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60847093 60853338 + Cyfip1 protein_coding retained_intron MGP_NODShiLtJ_T0083790.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60857444 60862793 + Cyfip1 protein_coding retained_intron MGP_NODShiLtJ_T0083791.1 MGP_NODShiLtJ_G0032130.1 mouse_genomes_project 7 60877962 60879550 + Cyfip1 protein_coding retained_intron MGP_NODShiLtJ_T0081336.1 MGP_NODShiLtJ_G0031496.1 mouse_genomes_project 7 13305294 13311796 + MGP_NODShiLtJ_P0081336 Obox7 protein_coding protein_coding MGP_NODShiLtJ_T0081337.1 MGP_NODShiLtJ_G0031496.1 mouse_genomes_project 7 13305531 13311796 + MGP_NODShiLtJ_P0081337 Obox7 protein_coding protein_coding MGP_NODShiLtJ_T0081338.1 MGP_NODShiLtJ_G0031496.1 mouse_genomes_project 7 13305543 13310374 + MGP_NODShiLtJ_P0081338 Obox7 protein_coding protein_coding MGP_NODShiLtJ_T0085766.1 MGP_NODShiLtJ_G0032718.1 mouse_genomes_project 7 134005787 134022010 - MGP_NODShiLtJ_P0085766 Umod protein_coding protein_coding MGP_NODShiLtJ_T0015591.1 MGP_NODShiLtJ_G0013699.1 mouse_genomes_project 7 15540017 15540425 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083254.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47259968 47264039 - MGP_NODShiLtJ_P0083254 Nr1h2 protein_coding protein_coding MGP_NODShiLtJ_T0083255.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47259968 47264302 - MGP_NODShiLtJ_P0083255 Nr1h2 protein_coding protein_coding MGP_NODShiLtJ_T0083256.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47259969 47264301 - MGP_NODShiLtJ_P0083256 Nr1h2 protein_coding protein_coding MGP_NODShiLtJ_T0083257.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47259987 47264276 - MGP_NODShiLtJ_P0083257 Nr1h2 protein_coding protein_coding MGP_NODShiLtJ_T0083258.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47260004 47264276 - MGP_NODShiLtJ_P0083258 Nr1h2 protein_coding protein_coding MGP_NODShiLtJ_T0083259.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47260654 47264264 - Nr1h2 protein_coding retained_intron MGP_NODShiLtJ_T0083260.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47260726 47261976 - Nr1h2 protein_coding retained_intron MGP_NODShiLtJ_T0083261.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47261409 47264304 - Nr1h2 protein_coding retained_intron MGP_NODShiLtJ_T0083262.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47261492 47262224 - Nr1h2 protein_coding retained_intron MGP_NODShiLtJ_T0083263.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47262561 47262940 - Nr1h2 protein_coding retained_intron MGP_NODShiLtJ_T0083264.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47262846 47264276 - Nr1h2 protein_coding retained_intron MGP_NODShiLtJ_T0083265.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47262945 47263565 - Nr1h2 protein_coding retained_intron MGP_NODShiLtJ_T0083266.1 MGP_NODShiLtJ_G0031986.1 mouse_genomes_project 7 47262986 47264252 - Nr1h2 protein_coding retained_intron MGP_NODShiLtJ_T0102112.1 MGP_NODShiLtJ_G0040278.1 mouse_genomes_project 7 32023736 32024123 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015720.1 MGP_NODShiLtJ_G0013828.1 mouse_genomes_project 7 81072969 81073791 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102193.1 MGP_NODShiLtJ_G0040359.1 mouse_genomes_project 7 115343993 115344941 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081207.1 MGP_NODShiLtJ_G0031450.1 mouse_genomes_project 7 10502293 10503289 - MGP_NODShiLtJ_P0081207 Vmn1r83 protein_coding protein_coding MGP_NODShiLtJ_T0008935.1 MGP_NODShiLtJ_G0007190.1 mouse_genomes_project 7 141312233 141359047 - lincRNA lincRNA MGP_NODShiLtJ_T0081353.1 MGP_NODShiLtJ_G0031504.1 mouse_genomes_project 7 14905423 14930864 + MGP_NODShiLtJ_P0081353 Zfp541 protein_coding protein_coding MGP_NODShiLtJ_T0084214.1 MGP_NODShiLtJ_G0032215.1 mouse_genomes_project 7 87943976 87967307 - MGP_NODShiLtJ_P0084214 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084215.1 MGP_NODShiLtJ_G0032215.1 mouse_genomes_project 7 87943984 87947680 - protein_coding retained_intron MGP_NODShiLtJ_T0084216.1 MGP_NODShiLtJ_G0032215.1 mouse_genomes_project 7 87944444 87972435 - MGP_NODShiLtJ_P0084216 protein_coding protein_coding MGP_NODShiLtJ_T0084217.1 MGP_NODShiLtJ_G0032215.1 mouse_genomes_project 7 87966307 87985248 - MGP_NODShiLtJ_P0084217 protein_coding protein_coding MGP_NODShiLtJ_T0084218.1 MGP_NODShiLtJ_G0032215.1 mouse_genomes_project 7 87966865 87972445 - protein_coding processed_transcript MGP_NODShiLtJ_T0010781.1 MGP_NODShiLtJ_G0008914.1 mouse_genomes_project 7 67811536 67811599 - Mir344b miRNA miRNA MGP_NODShiLtJ_T0102082.1 MGP_NODShiLtJ_G0040249.1 mouse_genomes_project 7 11651453 11691144 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086451.1 MGP_NODShiLtJ_G0032854.1 mouse_genomes_project 7 142838840 142854883 + MGP_NODShiLtJ_P0086451 Rnf40 protein_coding protein_coding MGP_NODShiLtJ_T0086452.1 MGP_NODShiLtJ_G0032854.1 mouse_genomes_project 7 142838992 142853680 + MGP_NODShiLtJ_P0086452 Rnf40 protein_coding protein_coding MGP_NODShiLtJ_T0086453.1 MGP_NODShiLtJ_G0032854.1 mouse_genomes_project 7 142838992 142853669 + MGP_NODShiLtJ_P0086453 Rnf40 protein_coding protein_coding MGP_NODShiLtJ_T0086454.1 MGP_NODShiLtJ_G0032854.1 mouse_genomes_project 7 142842486 142844812 + Rnf40 protein_coding retained_intron MGP_NODShiLtJ_T0086455.1 MGP_NODShiLtJ_G0032854.1 mouse_genomes_project 7 142842947 142846318 + Rnf40 protein_coding retained_intron MGP_NODShiLtJ_T0086456.1 MGP_NODShiLtJ_G0032854.1 mouse_genomes_project 7 142846898 142850691 + Rnf40 protein_coding retained_intron MGP_NODShiLtJ_T0083562.1 MGP_NODShiLtJ_G0032066.1 mouse_genomes_project 7 48686577 48704636 - MGP_NODShiLtJ_P0083562 Kcnj14 protein_coding protein_coding MGP_NODShiLtJ_T0083802.1 MGP_NODShiLtJ_G0032132.1 mouse_genomes_project 7 60923919 60967257 - MGP_NODShiLtJ_P0083802 Nipa1 protein_coding protein_coding MGP_NODShiLtJ_T0010786.1 MGP_NODShiLtJ_G0008919.1 mouse_genomes_project 7 68176187 68176255 - Mir344f miRNA miRNA MGP_NODShiLtJ_T0008974.1 MGP_NODShiLtJ_G0007215.1 mouse_genomes_project 7 151548142 151570349 - 5830432E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0008975.1 MGP_NODShiLtJ_G0007215.1 mouse_genomes_project 7 151566522 151570380 - 5830432E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0010783.1 MGP_NODShiLtJ_G0008916.1 mouse_genomes_project 7 67919027 67919122 - Mir344 miRNA miRNA MGP_NODShiLtJ_T0015572.1 MGP_NODShiLtJ_G0013680.1 mouse_genomes_project 7 10816546 10817994 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083953.1 MGP_NODShiLtJ_G0032167.1 mouse_genomes_project 7 72795081 72853115 - Lrrk1 protein_coding processed_transcript MGP_NODShiLtJ_T0083954.1 MGP_NODShiLtJ_G0032167.1 mouse_genomes_project 7 72849324 72980008 - MGP_NODShiLtJ_P0083954 Lrrk1 protein_coding protein_coding MGP_NODShiLtJ_T0083955.1 MGP_NODShiLtJ_G0032167.1 mouse_genomes_project 7 72849331 72856144 - Lrrk1 protein_coding retained_intron MGP_NODShiLtJ_T0083956.1 MGP_NODShiLtJ_G0032167.1 mouse_genomes_project 7 72849762 72875785 - MGP_NODShiLtJ_P0083956 Lrrk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083957.1 MGP_NODShiLtJ_G0032167.1 mouse_genomes_project 7 72856762 72860377 - Lrrk1 protein_coding retained_intron MGP_NODShiLtJ_T0083958.1 MGP_NODShiLtJ_G0032167.1 mouse_genomes_project 7 72930254 72932028 - Lrrk1 protein_coding processed_transcript MGP_NODShiLtJ_T0083959.1 MGP_NODShiLtJ_G0032167.1 mouse_genomes_project 7 72930423 72979965 - Lrrk1 protein_coding retained_intron MGP_NODShiLtJ_T0002199.1 MGP_NODShiLtJ_G0002111.1 mouse_genomes_project 7 70961102 70961707 + TEC TEC MGP_NODShiLtJ_T0084546.1 MGP_NODShiLtJ_G0032303.1 mouse_genomes_project 7 99327432 99547468 - MGP_NODShiLtJ_P0084546 Tmem135 protein_coding protein_coding MGP_NODShiLtJ_T0084547.1 MGP_NODShiLtJ_G0032303.1 mouse_genomes_project 7 99329565 99342724 - Tmem135 protein_coding retained_intron MGP_NODShiLtJ_T0084548.1 MGP_NODShiLtJ_G0032303.1 mouse_genomes_project 7 99333776 99547441 - MGP_NODShiLtJ_P0084548 Tmem135 protein_coding protein_coding MGP_NODShiLtJ_T0084549.1 MGP_NODShiLtJ_G0032303.1 mouse_genomes_project 7 99342550 99348041 - Tmem135 protein_coding processed_transcript MGP_NODShiLtJ_T0084550.1 MGP_NODShiLtJ_G0032303.1 mouse_genomes_project 7 99344871 99611466 - Tmem135 protein_coding processed_transcript MGP_NODShiLtJ_T0084551.1 MGP_NODShiLtJ_G0032303.1 mouse_genomes_project 7 99347401 99502744 - Tmem135 protein_coding processed_transcript MGP_NODShiLtJ_T0084552.1 MGP_NODShiLtJ_G0032303.1 mouse_genomes_project 7 99509253 99547372 - Tmem135 protein_coding retained_intron MGP_NODShiLtJ_T0084553.1 MGP_NODShiLtJ_G0032303.1 mouse_genomes_project 7 99510233 99547418 - MGP_NODShiLtJ_P0084553 Tmem135 protein_coding protein_coding MGP_NODShiLtJ_T0081218.1 MGP_NODShiLtJ_G0031456.1 mouse_genomes_project 7 10882466 10893929 - MGP_NODShiLtJ_P0081218 protein_coding protein_coding MGP_NODShiLtJ_T0085386.1 MGP_NODShiLtJ_G0032607.1 mouse_genomes_project 7 121092796 121102487 - MGP_NODShiLtJ_P0085386 Cyb5r2 protein_coding protein_coding MGP_NODShiLtJ_T0085387.1 MGP_NODShiLtJ_G0032607.1 mouse_genomes_project 7 121094313 121102484 - MGP_NODShiLtJ_P0085387 Cyb5r2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082553.1 MGP_NODShiLtJ_G0031829.1 mouse_genomes_project 7 30967734 30969467 + MGP_NODShiLtJ_P0082553 E130208F15Rik protein_coding protein_coding MGP_NODShiLtJ_T0015553.1 MGP_NODShiLtJ_G0013661.1 mouse_genomes_project 7 963438 964270 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002215.1 MGP_NODShiLtJ_G0002126.1 mouse_genomes_project 7 83093180 83097176 + TEC TEC MGP_NODShiLtJ_T0015774.1 MGP_NODShiLtJ_G0013882.1 mouse_genomes_project 7 123005920 123007319 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098453.1 MGP_NODShiLtJ_G0036853.1 mouse_genomes_project 7 145119175 145145511 + Gm33248 sense_intronic sense_intronic MGP_NODShiLtJ_T0086375.1 MGP_NODShiLtJ_G0032837.1 mouse_genomes_project 7 142450957 142454708 - MGP_NODShiLtJ_P0086375 Dctpp1 protein_coding protein_coding MGP_NODShiLtJ_T0100762.1 MGP_NODShiLtJ_G0039156.1 mouse_genomes_project 7 110718377 110718499 + Gm23479 snoRNA snoRNA MGP_NODShiLtJ_T0085401.1 MGP_NODShiLtJ_G0032621.1 mouse_genomes_project 7 121705263 121706208 - MGP_NODShiLtJ_P0085401 Olfr488 protein_coding protein_coding MGP_NODShiLtJ_T0081204.1 MGP_NODShiLtJ_G0031448.1 mouse_genomes_project 7 10414175 10415096 - MGP_NODShiLtJ_P0081204 Vmn1r81 protein_coding protein_coding MGP_NODShiLtJ_T0086049.1 MGP_NODShiLtJ_G0032783.1 mouse_genomes_project 7 141482706 141489668 - MGP_NODShiLtJ_P0086049 Lat protein_coding protein_coding MGP_NODShiLtJ_T0086050.1 MGP_NODShiLtJ_G0032783.1 mouse_genomes_project 7 141482709 141489661 - MGP_NODShiLtJ_P0086050 Lat protein_coding protein_coding MGP_NODShiLtJ_T0086051.1 MGP_NODShiLtJ_G0032783.1 mouse_genomes_project 7 141482786 141483769 - Lat protein_coding retained_intron MGP_NODShiLtJ_T0086052.1 MGP_NODShiLtJ_G0032783.1 mouse_genomes_project 7 141487644 141489697 - Lat protein_coding retained_intron MGP_NODShiLtJ_T0086053.1 MGP_NODShiLtJ_G0032783.1 mouse_genomes_project 7 141488225 141489621 - MGP_NODShiLtJ_P0086053 Lat protein_coding protein_coding MGP_NODShiLtJ_T0086054.1 MGP_NODShiLtJ_G0032783.1 mouse_genomes_project 7 141488783 141489467 - Lat protein_coding retained_intron MGP_NODShiLtJ_T0002221.1 MGP_NODShiLtJ_G0002132.1 mouse_genomes_project 7 85307299 85308154 + TEC TEC MGP_NODShiLtJ_T0018244.1 MGP_NODShiLtJ_G0015551.1 mouse_genomes_project 7 126505610 126582487 - 2310014F06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0008747.1 MGP_NODShiLtJ_G0007060.1 mouse_genomes_project 7 31602749 31605231 + lincRNA lincRNA MGP_NODShiLtJ_T0085353.1 MGP_NODShiLtJ_G0032581.1 mouse_genomes_project 7 120003229 120004180 - MGP_NODShiLtJ_P0085353 Olfr700 protein_coding protein_coding MGP_NODShiLtJ_T0086829.1 MGP_NODShiLtJ_G0032928.1 mouse_genomes_project 7 149402786 149438190 + MGP_NODShiLtJ_P0086829 Edrf1 protein_coding protein_coding MGP_NODShiLtJ_T0086830.1 MGP_NODShiLtJ_G0032928.1 mouse_genomes_project 7 149402936 149437398 + MGP_NODShiLtJ_P0086830 Edrf1 protein_coding protein_coding MGP_NODShiLtJ_T0086831.1 MGP_NODShiLtJ_G0032928.1 mouse_genomes_project 7 149403104 149404586 + Edrf1 protein_coding retained_intron MGP_NODShiLtJ_T0086832.1 MGP_NODShiLtJ_G0032928.1 mouse_genomes_project 7 149422341 149427118 + MGP_NODShiLtJ_P0086832 Edrf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086833.1 MGP_NODShiLtJ_G0032928.1 mouse_genomes_project 7 149431162 149437148 + MGP_NODShiLtJ_P0086833 Edrf1 protein_coding protein_coding MGP_NODShiLtJ_T0086834.1 MGP_NODShiLtJ_G0032928.1 mouse_genomes_project 7 149432442 149436689 + Edrf1 protein_coding retained_intron MGP_NODShiLtJ_T0084509.1 MGP_NODShiLtJ_G0032282.1 mouse_genomes_project 7 95655401 95656457 - MGP_NODShiLtJ_P0084509 Olfr308 protein_coding protein_coding MGP_NODShiLtJ_T0008911.1 MGP_NODShiLtJ_G0007176.1 mouse_genomes_project 7 129122998 129163768 + A730082K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008912.1 MGP_NODShiLtJ_G0007176.1 mouse_genomes_project 7 129123036 129134289 + A730082K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008913.1 MGP_NODShiLtJ_G0007176.1 mouse_genomes_project 7 129126459 129153874 + A730082K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008914.1 MGP_NODShiLtJ_G0007176.1 mouse_genomes_project 7 129126474 129152398 + A730082K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008915.1 MGP_NODShiLtJ_G0007176.1 mouse_genomes_project 7 129126492 129162673 + A730082K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0082023.1 MGP_NODShiLtJ_G0031694.1 mouse_genomes_project 7 25739646 25755023 - MGP_NODShiLtJ_P0082023 Cyp2s1 protein_coding protein_coding MGP_NODShiLtJ_T0082024.1 MGP_NODShiLtJ_G0031694.1 mouse_genomes_project 7 25739646 25754763 - MGP_NODShiLtJ_P0082024 Cyp2s1 protein_coding protein_coding MGP_NODShiLtJ_T0082025.1 MGP_NODShiLtJ_G0031694.1 mouse_genomes_project 7 25741319 25754668 - Cyp2s1 protein_coding retained_intron MGP_NODShiLtJ_T0082026.1 MGP_NODShiLtJ_G0031694.1 mouse_genomes_project 7 25746495 25753500 - MGP_NODShiLtJ_P0082026 Cyp2s1 protein_coding protein_coding MGP_NODShiLtJ_T0102089.1 MGP_NODShiLtJ_G0040256.1 mouse_genomes_project 7 13168080 13168600 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015630.1 MGP_NODShiLtJ_G0013738.1 mouse_genomes_project 7 33530998 33532007 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098448.1 MGP_NODShiLtJ_G0036849.1 mouse_genomes_project 7 130569763 130571161 - Gm44867 sense_intronic sense_intronic MGP_NODShiLtJ_T0098449.1 MGP_NODShiLtJ_G0036849.1 mouse_genomes_project 7 130569763 130571303 - Gm44867 sense_intronic sense_intronic MGP_NODShiLtJ_T0083522.1 MGP_NODShiLtJ_G0032058.1 mouse_genomes_project 7 48554991 48560059 + MGP_NODShiLtJ_P0083522 Dbp protein_coding protein_coding MGP_NODShiLtJ_T0083523.1 MGP_NODShiLtJ_G0032058.1 mouse_genomes_project 7 48555527 48560018 + MGP_NODShiLtJ_P0083523 Dbp protein_coding protein_coding MGP_NODShiLtJ_T0083524.1 MGP_NODShiLtJ_G0032058.1 mouse_genomes_project 7 48555527 48560018 + MGP_NODShiLtJ_P0083524 Dbp protein_coding protein_coding MGP_NODShiLtJ_T0083525.1 MGP_NODShiLtJ_G0032058.1 mouse_genomes_project 7 48557007 48559932 + Dbp protein_coding retained_intron MGP_NODShiLtJ_T0083526.1 MGP_NODShiLtJ_G0032058.1 mouse_genomes_project 7 48557792 48559800 + Dbp protein_coding retained_intron MGP_NODShiLtJ_T0008752.1 MGP_NODShiLtJ_G0007065.1 mouse_genomes_project 7 35706846 35718625 + Gm12784 lincRNA lincRNA MGP_NODShiLtJ_T0008753.1 MGP_NODShiLtJ_G0007065.1 mouse_genomes_project 7 35709624 35748645 + Gm12784 lincRNA lincRNA MGP_NODShiLtJ_T0083363.1 MGP_NODShiLtJ_G0032015.1 mouse_genomes_project 7 47857902 47867925 - MGP_NODShiLtJ_P0083363 Rcn3 protein_coding protein_coding MGP_NODShiLtJ_T0081161.1 MGP_NODShiLtJ_G0031417.1 mouse_genomes_project 7 3861788 3862733 + MGP_NODShiLtJ_P0081161 Olfr1336 protein_coding protein_coding MGP_NODShiLtJ_T0005109.1 MGP_NODShiLtJ_G0004348.1 mouse_genomes_project 7 23806598 23811534 - Gm44793 antisense antisense MGP_NODShiLtJ_T0008728.1 MGP_NODShiLtJ_G0007043.1 mouse_genomes_project 7 15789819 15793362 - 9330104G04Rik lincRNA lincRNA MGP_NODShiLtJ_T0008729.1 MGP_NODShiLtJ_G0007043.1 mouse_genomes_project 7 15791417 15793362 - 9330104G04Rik lincRNA lincRNA MGP_NODShiLtJ_T0085399.1 MGP_NODShiLtJ_G0032619.1 mouse_genomes_project 7 121535244 121536310 + MGP_NODShiLtJ_P0085399 Olfr483 protein_coding protein_coding MGP_NODShiLtJ_T0085382.1 MGP_NODShiLtJ_G0032604.1 mouse_genomes_project 7 120904614 120927721 + MGP_NODShiLtJ_P0085382 Olfml1 protein_coding protein_coding MGP_NODShiLtJ_T0083507.1 MGP_NODShiLtJ_G0032051.1 mouse_genomes_project 7 48464051 48469755 + MGP_NODShiLtJ_P0083507 Izumo1 protein_coding protein_coding MGP_NODShiLtJ_T0083508.1 MGP_NODShiLtJ_G0032051.1 mouse_genomes_project 7 48466632 48471336 + Izumo1 protein_coding retained_intron MGP_NODShiLtJ_T0083518.1 MGP_NODShiLtJ_G0032056.1 mouse_genomes_project 7 48531020 48541552 + MGP_NODShiLtJ_P0083518 Ntn5 protein_coding protein_coding MGP_NODShiLtJ_T0083519.1 MGP_NODShiLtJ_G0032056.1 mouse_genomes_project 7 48531414 48541555 + MGP_NODShiLtJ_P0083519 Ntn5 protein_coding protein_coding MGP_NODShiLtJ_T0083520.1 MGP_NODShiLtJ_G0032056.1 mouse_genomes_project 7 48531427 48541426 + MGP_NODShiLtJ_P0083520 Ntn5 protein_coding protein_coding MGP_NODShiLtJ_T0084876.1 MGP_NODShiLtJ_G0032382.1 mouse_genomes_project 7 112534863 112572563 + MGP_NODShiLtJ_P0084876 Rab6a protein_coding protein_coding MGP_NODShiLtJ_T0084877.1 MGP_NODShiLtJ_G0032382.1 mouse_genomes_project 7 112535039 112572563 + MGP_NODShiLtJ_P0084877 Rab6a protein_coding protein_coding MGP_NODShiLtJ_T0084878.1 MGP_NODShiLtJ_G0032382.1 mouse_genomes_project 7 112535143 112572563 + MGP_NODShiLtJ_P0084878 Rab6a protein_coding protein_coding MGP_NODShiLtJ_T0084879.1 MGP_NODShiLtJ_G0032382.1 mouse_genomes_project 7 112564761 112569778 + Rab6a protein_coding retained_intron MGP_NODShiLtJ_T0081796.1 MGP_NODShiLtJ_G0031642.1 mouse_genomes_project 7 24160581 24174389 - MGP_NODShiLtJ_P0081796 Irgc1 protein_coding protein_coding MGP_NODShiLtJ_T0081797.1 MGP_NODShiLtJ_G0031642.1 mouse_genomes_project 7 24160581 24164189 - MGP_NODShiLtJ_P0081797 Irgc1 protein_coding protein_coding MGP_NODShiLtJ_T0081798.1 MGP_NODShiLtJ_G0031642.1 mouse_genomes_project 7 24161803 24181314 - MGP_NODShiLtJ_P0081798 Irgc1 protein_coding protein_coding MGP_NODShiLtJ_T0081799.1 MGP_NODShiLtJ_G0031642.1 mouse_genomes_project 7 24179622 24181440 - Irgc1 protein_coding processed_transcript MGP_NODShiLtJ_T0081800.1 MGP_NODShiLtJ_G0031642.1 mouse_genomes_project 7 24180025 24181430 - Irgc1 protein_coding processed_transcript MGP_NODShiLtJ_T0100759.1 MGP_NODShiLtJ_G0039153.1 mouse_genomes_project 7 91418645 91418777 + Gm22934 snoRNA snoRNA MGP_NODShiLtJ_T0087022.1 MGP_NODShiLtJ_G0032980.1 mouse_genomes_project 7 156497851 156498901 + MGP_NODShiLtJ_P0087022 Olfr525 protein_coding protein_coding MGP_NODShiLtJ_T0005134.1 MGP_NODShiLtJ_G0004367.1 mouse_genomes_project 7 31704054 31706909 + Gm17077 antisense antisense MGP_NODShiLtJ_T0015798.1 MGP_NODShiLtJ_G0013906.1 mouse_genomes_project 7 141967922 141968226 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005258.1 MGP_NODShiLtJ_G0004453.1 mouse_genomes_project 7 159634624 159640202 - Gm28821 antisense antisense MGP_NODShiLtJ_T0102207.1 MGP_NODShiLtJ_G0040373.1 mouse_genomes_project 7 117304914 117305285 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002238.1 MGP_NODShiLtJ_G0002149.1 mouse_genomes_project 7 89833479 89835688 - TEC TEC MGP_NODShiLtJ_T0086880.1 MGP_NODShiLtJ_G0032938.1 mouse_genomes_project 7 151160465 151164769 + MGP_NODShiLtJ_P0086880 Nps protein_coding protein_coding MGP_NODShiLtJ_T0083061.1 MGP_NODShiLtJ_G0031937.1 mouse_genomes_project 7 45366196 45374430 - MGP_NODShiLtJ_P0083061 protein_coding protein_coding MGP_NODShiLtJ_T0082432.1 MGP_NODShiLtJ_G0031800.1 mouse_genomes_project 7 30355127 30367535 + MGP_NODShiLtJ_P0082432 Zfp84 protein_coding protein_coding MGP_NODShiLtJ_T0005144.1 MGP_NODShiLtJ_G0004375.1 mouse_genomes_project 7 36335034 36336600 - Gm45091 antisense antisense MGP_NODShiLtJ_T0081653.1 MGP_NODShiLtJ_G0031592.1 mouse_genomes_project 7 18968683 18978738 - MGP_NODShiLtJ_P0081653 Gemin7 protein_coding protein_coding MGP_NODShiLtJ_T0081654.1 MGP_NODShiLtJ_G0031592.1 mouse_genomes_project 7 18968686 18978243 - MGP_NODShiLtJ_P0081654 Gemin7 protein_coding protein_coding MGP_NODShiLtJ_T0081655.1 MGP_NODShiLtJ_G0031592.1 mouse_genomes_project 7 18968824 18977868 - MGP_NODShiLtJ_P0081655 Gemin7 protein_coding protein_coding MGP_NODShiLtJ_T0081656.1 MGP_NODShiLtJ_G0031592.1 mouse_genomes_project 7 18968856 18977989 - MGP_NODShiLtJ_P0081656 Gemin7 protein_coding protein_coding MGP_NODShiLtJ_T0081657.1 MGP_NODShiLtJ_G0031592.1 mouse_genomes_project 7 18968983 18978285 - MGP_NODShiLtJ_P0081657 Gemin7 protein_coding protein_coding MGP_NODShiLtJ_T0081658.1 MGP_NODShiLtJ_G0031592.1 mouse_genomes_project 7 18969161 18978074 - MGP_NODShiLtJ_P0081658 Gemin7 protein_coding protein_coding MGP_NODShiLtJ_T0081312.1 MGP_NODShiLtJ_G0031481.1 mouse_genomes_project 7 11746386 11776543 + MGP_NODShiLtJ_P0081312 Bsph1 protein_coding protein_coding MGP_NODShiLtJ_T0081313.1 MGP_NODShiLtJ_G0031481.1 mouse_genomes_project 7 11746401 11776473 + MGP_NODShiLtJ_P0081313 Bsph1 protein_coding protein_coding MGP_NODShiLtJ_T0083361.1 MGP_NODShiLtJ_G0032014.1 mouse_genomes_project 7 47835848 47851925 + MGP_NODShiLtJ_P0083361 Nosip protein_coding protein_coding MGP_NODShiLtJ_T0083362.1 MGP_NODShiLtJ_G0032014.1 mouse_genomes_project 7 47835848 47851925 + MGP_NODShiLtJ_P0083362 Nosip protein_coding protein_coding MGP_NODShiLtJ_T0086496.1 MGP_NODShiLtJ_G0032862.1 mouse_genomes_project 7 143042587 143061110 + MGP_NODShiLtJ_P0086496 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086497.1 MGP_NODShiLtJ_G0032862.1 mouse_genomes_project 7 143056688 143059330 + MGP_NODShiLtJ_P0086497 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085364.1 MGP_NODShiLtJ_G0032591.1 mouse_genomes_project 7 120200359 120204908 - MGP_NODShiLtJ_P0085364 Olfr710 protein_coding protein_coding MGP_NODShiLtJ_T0002230.1 MGP_NODShiLtJ_G0002141.1 mouse_genomes_project 7 87621682 87623560 + TEC TEC MGP_NODShiLtJ_T0086383.1 MGP_NODShiLtJ_G0032840.1 mouse_genomes_project 7 142548919 142551548 - MGP_NODShiLtJ_P0086383 Zfp768 protein_coding protein_coding MGP_NODShiLtJ_T0086384.1 MGP_NODShiLtJ_G0032840.1 mouse_genomes_project 7 142548919 142551714 - MGP_NODShiLtJ_P0086384 Zfp768 protein_coding protein_coding MGP_NODShiLtJ_T0083336.1 MGP_NODShiLtJ_G0032000.1 mouse_genomes_project 7 47624795 47631544 - MGP_NODShiLtJ_P0083336 Ptov1 protein_coding protein_coding MGP_NODShiLtJ_T0010813.1 MGP_NODShiLtJ_G0008946.1 mouse_genomes_project 7 141488097 141488172 - Mir7058 miRNA miRNA MGP_NODShiLtJ_T0086480.1 MGP_NODShiLtJ_G0032859.1 mouse_genomes_project 7 142999342 143005387 + MGP_NODShiLtJ_P0086480 Fbxl19 protein_coding protein_coding MGP_NODShiLtJ_T0086481.1 MGP_NODShiLtJ_G0032859.1 mouse_genomes_project 7 143000002 143025876 + MGP_NODShiLtJ_P0086481 Fbxl19 protein_coding protein_coding MGP_NODShiLtJ_T0086482.1 MGP_NODShiLtJ_G0032859.1 mouse_genomes_project 7 143000571 143005390 + MGP_NODShiLtJ_P0086482 Fbxl19 protein_coding protein_coding MGP_NODShiLtJ_T0086483.1 MGP_NODShiLtJ_G0032859.1 mouse_genomes_project 7 143000587 143026425 + MGP_NODShiLtJ_P0086483 Fbxl19 protein_coding protein_coding MGP_NODShiLtJ_T0086484.1 MGP_NODShiLtJ_G0032859.1 mouse_genomes_project 7 143002447 143025877 + MGP_NODShiLtJ_P0086484 Fbxl19 protein_coding protein_coding MGP_NODShiLtJ_T0086485.1 MGP_NODShiLtJ_G0032859.1 mouse_genomes_project 7 143003819 143025676 + MGP_NODShiLtJ_P0086485 Fbxl19 protein_coding protein_coding MGP_NODShiLtJ_T0086486.1 MGP_NODShiLtJ_G0032859.1 mouse_genomes_project 7 143003946 143026432 + MGP_NODShiLtJ_P0086486 Fbxl19 protein_coding protein_coding MGP_NODShiLtJ_T0084824.1 MGP_NODShiLtJ_G0032371.1 mouse_genomes_project 7 112037168 112039257 + MGP_NODShiLtJ_P0084824 Lipt2 protein_coding protein_coding MGP_NODShiLtJ_T0085361.1 MGP_NODShiLtJ_G0032588.1 mouse_genomes_project 7 120113123 120115055 - MGP_NODShiLtJ_P0085361 protein_coding protein_coding MGP_NODShiLtJ_T0082002.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25644019 25651997 - MGP_NODShiLtJ_P0082002 Ccdc97 protein_coding protein_coding MGP_NODShiLtJ_T0082003.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25645848 25649021 - Ccdc97 protein_coding processed_transcript MGP_NODShiLtJ_T0082004.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25647048 25651912 - Ccdc97 protein_coding retained_intron MGP_NODShiLtJ_T0082005.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25647736 25651954 - MGP_NODShiLtJ_P0082005 Ccdc97 protein_coding protein_coding MGP_NODShiLtJ_T0082006.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25647824 25649309 - Ccdc97 protein_coding retained_intron MGP_NODShiLtJ_T0082007.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25648818 25651915 - Ccdc97 protein_coding processed_transcript MGP_NODShiLtJ_T0082008.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25648818 25651900 - Ccdc97 protein_coding processed_transcript MGP_NODShiLtJ_T0082009.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25649055 25651964 - Ccdc97 protein_coding processed_transcript MGP_NODShiLtJ_T0082010.1 MGP_NODShiLtJ_G0031691.1 mouse_genomes_project 7 25649820 25651976 - Ccdc97 protein_coding processed_transcript MGP_NODShiLtJ_T0084825.1 MGP_NODShiLtJ_G0032372.1 mouse_genomes_project 7 112055880 112065458 + MGP_NODShiLtJ_P0084825 Kcne3 protein_coding protein_coding MGP_NODShiLtJ_T0084826.1 MGP_NODShiLtJ_G0032372.1 mouse_genomes_project 7 112059294 112065458 + MGP_NODShiLtJ_P0084826 Kcne3 protein_coding protein_coding MGP_NODShiLtJ_T0084827.1 MGP_NODShiLtJ_G0032372.1 mouse_genomes_project 7 112059294 112065458 + MGP_NODShiLtJ_P0084827 Kcne3 protein_coding protein_coding MGP_NODShiLtJ_T0084828.1 MGP_NODShiLtJ_G0032372.1 mouse_genomes_project 7 112059294 112065458 + MGP_NODShiLtJ_P0084828 Kcne3 protein_coding protein_coding MGP_NODShiLtJ_T0015624.1 MGP_NODShiLtJ_G0013732.1 mouse_genomes_project 7 27531961 27532586 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083242.1 MGP_NODShiLtJ_G0031984.1 mouse_genomes_project 7 47236788 47242879 - MGP_NODShiLtJ_P0083242 Spib protein_coding protein_coding MGP_NODShiLtJ_T0083243.1 MGP_NODShiLtJ_G0031984.1 mouse_genomes_project 7 47238769 47242082 - MGP_NODShiLtJ_P0083243 Spib protein_coding protein_coding MGP_NODShiLtJ_T0083244.1 MGP_NODShiLtJ_G0031984.1 mouse_genomes_project 7 47238769 47242861 - MGP_NODShiLtJ_P0083244 Spib protein_coding protein_coding MGP_NODShiLtJ_T0102095.1 MGP_NODShiLtJ_G0040262.1 mouse_genomes_project 7 13266160 13266655 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086240.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142014097 142025721 - MGP_NODShiLtJ_P0086240 protein_coding protein_coding MGP_NODShiLtJ_T0086241.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142014717 142025913 - MGP_NODShiLtJ_P0086241 protein_coding protein_coding MGP_NODShiLtJ_T0086242.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142015570 142026827 - protein_coding retained_intron MGP_NODShiLtJ_T0086243.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142015717 142026310 - MGP_NODShiLtJ_P0086243 protein_coding protein_coding MGP_NODShiLtJ_T0086244.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142015819 142026182 - protein_coding processed_transcript MGP_NODShiLtJ_T0086245.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142015853 142026235 - MGP_NODShiLtJ_P0086245 protein_coding protein_coding MGP_NODShiLtJ_T0086246.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142015955 142020868 - MGP_NODShiLtJ_P0086246 protein_coding protein_coding MGP_NODShiLtJ_T0086247.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142016032 142026811 - MGP_NODShiLtJ_P0086247 protein_coding protein_coding MGP_NODShiLtJ_T0086248.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142016067 142026233 - MGP_NODShiLtJ_P0086248 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086249.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142019338 142026319 - protein_coding retained_intron MGP_NODShiLtJ_T0086250.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142020813 142026241 - protein_coding processed_transcript MGP_NODShiLtJ_T0086251.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142020836 142026294 - MGP_NODShiLtJ_P0086251 protein_coding protein_coding MGP_NODShiLtJ_T0086252.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142020851 142026098 - MGP_NODShiLtJ_P0086252 protein_coding protein_coding MGP_NODShiLtJ_T0086253.1 MGP_NODShiLtJ_G0032812.1 mouse_genomes_project 7 142025689 142026298 - protein_coding processed_transcript MGP_NODShiLtJ_T0098446.1 MGP_NODShiLtJ_G0036847.1 mouse_genomes_project 7 86588510 86604079 - Gm44606 sense_intronic sense_intronic MGP_NODShiLtJ_T0082554.1 MGP_NODShiLtJ_G0031830.1 mouse_genomes_project 7 31001441 31008692 - MGP_NODShiLtJ_P0082554 Lrfn3 protein_coding protein_coding MGP_NODShiLtJ_T0102135.1 MGP_NODShiLtJ_G0040301.1 mouse_genomes_project 7 46720761 46725206 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081550.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18438985 18449101 + MGP_NODShiLtJ_P0081550 Dmpk protein_coding protein_coding MGP_NODShiLtJ_T0081551.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18439004 18442117 + MGP_NODShiLtJ_P0081551 Dmpk protein_coding protein_coding MGP_NODShiLtJ_T0081552.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18439006 18449101 + MGP_NODShiLtJ_P0081552 Dmpk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081553.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18439021 18449101 + MGP_NODShiLtJ_P0081553 Dmpk protein_coding protein_coding MGP_NODShiLtJ_T0081554.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18439077 18449101 + MGP_NODShiLtJ_P0081554 Dmpk protein_coding protein_coding MGP_NODShiLtJ_T0081555.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18439846 18442852 + Dmpk protein_coding processed_transcript MGP_NODShiLtJ_T0081556.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18441636 18449099 + Dmpk protein_coding retained_intron MGP_NODShiLtJ_T0081557.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18441636 18449099 + Dmpk protein_coding retained_intron MGP_NODShiLtJ_T0081558.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18441636 18449099 + Dmpk protein_coding processed_transcript MGP_NODShiLtJ_T0081559.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18442419 18444283 + Dmpk protein_coding processed_transcript MGP_NODShiLtJ_T0081560.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18442643 18443782 + Dmpk protein_coding processed_transcript MGP_NODShiLtJ_T0081561.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18442761 18447047 + Dmpk protein_coding processed_transcript MGP_NODShiLtJ_T0081562.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18442896 18444509 + Dmpk protein_coding retained_intron MGP_NODShiLtJ_T0081563.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18443335 18448324 + Dmpk protein_coding processed_transcript MGP_NODShiLtJ_T0081564.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18446763 18447641 + Dmpk protein_coding retained_intron MGP_NODShiLtJ_T0081565.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18446896 18447815 + Dmpk protein_coding processed_transcript MGP_NODShiLtJ_T0081566.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18447497 18449051 + Dmpk protein_coding processed_transcript MGP_NODShiLtJ_T0081567.1 MGP_NODShiLtJ_G0031565.1 mouse_genomes_project 7 18447575 18448484 + Dmpk protein_coding retained_intron MGP_NODShiLtJ_T0081979.1 MGP_NODShiLtJ_G0031686.1 mouse_genomes_project 7 25552341 25554138 - MGP_NODShiLtJ_P0081979 Bckdha protein_coding protein_coding MGP_NODShiLtJ_T0081980.1 MGP_NODShiLtJ_G0031686.1 mouse_genomes_project 7 25552341 25589086 - MGP_NODShiLtJ_P0081980 Bckdha protein_coding protein_coding MGP_NODShiLtJ_T0084189.1 MGP_NODShiLtJ_G0032208.1 mouse_genomes_project 7 87773450 87812902 + MGP_NODShiLtJ_P0084189 Ticrr protein_coding protein_coding MGP_NODShiLtJ_T0084190.1 MGP_NODShiLtJ_G0032208.1 mouse_genomes_project 7 87773476 87774930 + Ticrr protein_coding retained_intron MGP_NODShiLtJ_T0084191.1 MGP_NODShiLtJ_G0032208.1 mouse_genomes_project 7 87773485 87812888 + MGP_NODShiLtJ_P0084191 Ticrr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084192.1 MGP_NODShiLtJ_G0032208.1 mouse_genomes_project 7 87773499 87799291 + MGP_NODShiLtJ_P0084192 Ticrr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084193.1 MGP_NODShiLtJ_G0032208.1 mouse_genomes_project 7 87773501 87808674 + MGP_NODShiLtJ_P0084193 Ticrr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084194.1 MGP_NODShiLtJ_G0032208.1 mouse_genomes_project 7 87784324 87790491 + Ticrr protein_coding processed_transcript MGP_NODShiLtJ_T0084195.1 MGP_NODShiLtJ_G0032208.1 mouse_genomes_project 7 87785715 87790491 + Ticrr protein_coding retained_intron MGP_NODShiLtJ_T0081851.1 MGP_NODShiLtJ_G0031660.1 mouse_genomes_project 7 24689712 24695838 + MGP_NODShiLtJ_P0081851 Rps19 protein_coding protein_coding MGP_NODShiLtJ_T0081852.1 MGP_NODShiLtJ_G0031660.1 mouse_genomes_project 7 24689736 24695831 + MGP_NODShiLtJ_P0081852 Rps19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081853.1 MGP_NODShiLtJ_G0031660.1 mouse_genomes_project 7 24689738 24692864 + Rps19 protein_coding retained_intron MGP_NODShiLtJ_T0081854.1 MGP_NODShiLtJ_G0031660.1 mouse_genomes_project 7 24689754 24694044 + MGP_NODShiLtJ_P0081854 Rps19 protein_coding protein_coding MGP_NODShiLtJ_T0081855.1 MGP_NODShiLtJ_G0031660.1 mouse_genomes_project 7 24689916 24694024 + MGP_NODShiLtJ_P0081855 Rps19 protein_coding protein_coding MGP_NODShiLtJ_T0081856.1 MGP_NODShiLtJ_G0031660.1 mouse_genomes_project 7 24690020 24694066 + MGP_NODShiLtJ_P0081856 Rps19 protein_coding protein_coding MGP_NODShiLtJ_T0081857.1 MGP_NODShiLtJ_G0031660.1 mouse_genomes_project 7 24693294 24695829 + Rps19 protein_coding retained_intron MGP_NODShiLtJ_T0081858.1 MGP_NODShiLtJ_G0031660.1 mouse_genomes_project 7 24693844 24695829 + Rps19 protein_coding processed_transcript MGP_NODShiLtJ_T0085882.1 MGP_NODShiLtJ_G0032752.1 mouse_genomes_project 7 136537149 136574597 + MGP_NODShiLtJ_P0085882 Scnn1g protein_coding protein_coding MGP_NODShiLtJ_T0102169.1 MGP_NODShiLtJ_G0040335.1 mouse_genomes_project 7 94055127 94091161 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081231.1 MGP_NODShiLtJ_G0031461.1 mouse_genomes_project 7 11120965 11131525 + MGP_NODShiLtJ_P0081231 Zscan22 protein_coding protein_coding MGP_NODShiLtJ_T0081232.1 MGP_NODShiLtJ_G0031461.1 mouse_genomes_project 7 11120986 11132369 + MGP_NODShiLtJ_P0081232 Zscan22 protein_coding protein_coding MGP_NODShiLtJ_T0081233.1 MGP_NODShiLtJ_G0031461.1 mouse_genomes_project 7 11120991 11130823 + MGP_NODShiLtJ_P0081233 Zscan22 protein_coding protein_coding MGP_NODShiLtJ_T0081234.1 MGP_NODShiLtJ_G0031461.1 mouse_genomes_project 7 11121017 11131528 + MGP_NODShiLtJ_P0081234 Zscan22 protein_coding protein_coding MGP_NODShiLtJ_T0085223.1 MGP_NODShiLtJ_G0032539.1 mouse_genomes_project 7 117687317 117688256 - MGP_NODShiLtJ_P0085223 Olfr672 protein_coding protein_coding MGP_NODShiLtJ_T0081102.1 MGP_NODShiLtJ_G0031391.1 mouse_genomes_project 7 2248524 2250715 + MGP_NODShiLtJ_P0081102 Zfp580 protein_coding protein_coding MGP_NODShiLtJ_T0083033.1 MGP_NODShiLtJ_G0031926.1 mouse_genomes_project 7 43351477 43380730 - MGP_NODShiLtJ_P0083033 protein_coding protein_coding MGP_NODShiLtJ_T0084805.1 MGP_NODShiLtJ_G0032363.1 mouse_genomes_project 7 111564906 111567335 + MGP_NODShiLtJ_P0084805 protein_coding protein_coding MGP_NODShiLtJ_T0084424.1 MGP_NODShiLtJ_G0032253.1 mouse_genomes_project 7 90195427 90195689 - MGP_NODShiLtJ_P0084424 Gm10160 protein_coding protein_coding MGP_NODShiLtJ_T0010756.1 MGP_NODShiLtJ_G0008889.1 mouse_genomes_project 7 36293633 36293703 + Gm25033 miRNA miRNA MGP_NODShiLtJ_T0082295.1 MGP_NODShiLtJ_G0031772.1 mouse_genomes_project 7 29211879 29232272 + MGP_NODShiLtJ_P0082295 Sars2 protein_coding protein_coding MGP_NODShiLtJ_T0015695.1 MGP_NODShiLtJ_G0013803.1 mouse_genomes_project 7 59029191 59030423 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008901.1 MGP_NODShiLtJ_G0007169.1 mouse_genomes_project 7 120611088 120626402 + lincRNA lincRNA MGP_NODShiLtJ_T0084483.1 MGP_NODShiLtJ_G0032269.1 mouse_genomes_project 7 92410832 92415325 - MGP_NODShiLtJ_P0084483 Mesdc1 protein_coding protein_coding MGP_NODShiLtJ_T0008762.1 MGP_NODShiLtJ_G0007074.1 mouse_genomes_project 7 37906847 37910590 + Gm29129 lincRNA lincRNA MGP_NODShiLtJ_T0005089.1 MGP_NODShiLtJ_G0004336.1 mouse_genomes_project 7 1613201 1614852 + Gm15873 antisense antisense MGP_NODShiLtJ_T0005090.1 MGP_NODShiLtJ_G0004336.1 mouse_genomes_project 7 1613299 1617237 + Gm15873 antisense antisense MGP_NODShiLtJ_T0084252.1 MGP_NODShiLtJ_G0032225.1 mouse_genomes_project 7 88465626 88488827 + MGP_NODShiLtJ_P0084252 Vps33b protein_coding protein_coding MGP_NODShiLtJ_T0084253.1 MGP_NODShiLtJ_G0032225.1 mouse_genomes_project 7 88465656 88488825 + MGP_NODShiLtJ_P0084253 Vps33b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084254.1 MGP_NODShiLtJ_G0032225.1 mouse_genomes_project 7 88465711 88483027 + Vps33b protein_coding retained_intron MGP_NODShiLtJ_T0084255.1 MGP_NODShiLtJ_G0032225.1 mouse_genomes_project 7 88465717 88488823 + MGP_NODShiLtJ_P0084255 Vps33b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084256.1 MGP_NODShiLtJ_G0032225.1 mouse_genomes_project 7 88471627 88481352 + Vps33b protein_coding processed_transcript MGP_NODShiLtJ_T0084257.1 MGP_NODShiLtJ_G0032225.1 mouse_genomes_project 7 88487289 88489002 + MGP_NODShiLtJ_P0084257 Vps33b protein_coding protein_coding MGP_NODShiLtJ_T0084258.1 MGP_NODShiLtJ_G0032225.1 mouse_genomes_project 7 88487337 88488160 + Vps33b protein_coding retained_intron MGP_NODShiLtJ_T0008726.1 MGP_NODShiLtJ_G0007041.1 mouse_genomes_project 7 11197123 11199703 + Gm29638 lincRNA lincRNA MGP_NODShiLtJ_T0015702.1 MGP_NODShiLtJ_G0013810.1 mouse_genomes_project 7 61856696 61857555 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085629.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128900928 128949824 + MGP_NODShiLtJ_P0085629 Insc protein_coding protein_coding MGP_NODShiLtJ_T0085630.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128902974 128950102 + MGP_NODShiLtJ_P0085630 Insc protein_coding protein_coding MGP_NODShiLtJ_T0085631.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128903000 129012619 + MGP_NODShiLtJ_P0085631 Insc protein_coding protein_coding MGP_NODShiLtJ_T0085632.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128910957 128927262 + Insc protein_coding retained_intron MGP_NODShiLtJ_T0085633.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128926652 129012622 + MGP_NODShiLtJ_P0085633 Insc protein_coding protein_coding MGP_NODShiLtJ_T0085634.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128926690 128949861 + MGP_NODShiLtJ_P0085634 Insc protein_coding protein_coding MGP_NODShiLtJ_T0085635.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128929234 128949997 + Insc protein_coding processed_transcript MGP_NODShiLtJ_T0085636.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128952436 129012619 + Insc protein_coding retained_intron MGP_NODShiLtJ_T0085637.1 MGP_NODShiLtJ_G0032694.1 mouse_genomes_project 7 128954359 128991431 + MGP_NODShiLtJ_P0085637 Insc protein_coding protein_coding MGP_NODShiLtJ_T0081405.1 MGP_NODShiLtJ_G0031514.1 mouse_genomes_project 7 15178050 15186644 + MGP_NODShiLtJ_P0081405 Bbc3 protein_coding protein_coding MGP_NODShiLtJ_T0081406.1 MGP_NODShiLtJ_G0031514.1 mouse_genomes_project 7 15178890 15182175 + MGP_NODShiLtJ_P0081406 Bbc3 protein_coding protein_coding MGP_NODShiLtJ_T0081407.1 MGP_NODShiLtJ_G0031514.1 mouse_genomes_project 7 15181953 15186138 + Bbc3 protein_coding processed_transcript MGP_NODShiLtJ_T0085365.1 MGP_NODShiLtJ_G0032592.1 mouse_genomes_project 7 120212676 120213627 - MGP_NODShiLtJ_P0085365 Olfr6 protein_coding protein_coding MGP_NODShiLtJ_T0015773.1 MGP_NODShiLtJ_G0013881.1 mouse_genomes_project 7 120529491 120530943 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081948.1 MGP_NODShiLtJ_G0031678.1 mouse_genomes_project 7 25246845 25248929 - MGP_NODShiLtJ_P0081948 Cnfn protein_coding protein_coding MGP_NODShiLtJ_T0081949.1 MGP_NODShiLtJ_G0031678.1 mouse_genomes_project 7 25246847 25248950 - MGP_NODShiLtJ_P0081949 Cnfn protein_coding protein_coding MGP_NODShiLtJ_T0002163.1 MGP_NODShiLtJ_G0002075.1 mouse_genomes_project 7 38057327 38058485 + TEC TEC MGP_NODShiLtJ_T0081464.1 MGP_NODShiLtJ_G0031529.1 mouse_genomes_project 7 15838775 15843191 + MGP_NODShiLtJ_P0081464 Ptgir protein_coding protein_coding MGP_NODShiLtJ_T0081465.1 MGP_NODShiLtJ_G0031529.1 mouse_genomes_project 7 15838799 15843186 + MGP_NODShiLtJ_P0081465 Ptgir protein_coding protein_coding MGP_NODShiLtJ_T0085252.1 MGP_NODShiLtJ_G0032560.1 mouse_genomes_project 7 118439261 118442525 - MGP_NODShiLtJ_P0085252 Prkcdbp protein_coding protein_coding MGP_NODShiLtJ_T0002185.1 MGP_NODShiLtJ_G0002097.1 mouse_genomes_project 7 59683727 59684499 - TEC TEC MGP_NODShiLtJ_T0087096.1 MGP_NODShiLtJ_G0033014.1 mouse_genomes_project 7 157325385 157327558 + MGP_NODShiLtJ_P0087096 Gm17387 protein_coding protein_coding MGP_NODShiLtJ_T0085209.1 MGP_NODShiLtJ_G0032526.1 mouse_genomes_project 7 117242039 117243030 + MGP_NODShiLtJ_P0085209 Olfr656 protein_coding protein_coding MGP_NODShiLtJ_T0083178.1 MGP_NODShiLtJ_G0031974.1 mouse_genomes_project 7 46988099 46992315 - MGP_NODShiLtJ_P0083178 Clec11a protein_coding protein_coding MGP_NODShiLtJ_T0086886.1 MGP_NODShiLtJ_G0032944.1 mouse_genomes_project 7 152879652 153120258 + MGP_NODShiLtJ_P0086886 Mgmt protein_coding protein_coding MGP_NODShiLtJ_T0087280.1 MGP_NODShiLtJ_G0033046.1 mouse_genomes_project 7 157991137 158019008 - MGP_NODShiLtJ_P0087280 Muc6 protein_coding protein_coding MGP_NODShiLtJ_T0087281.1 MGP_NODShiLtJ_G0033046.1 mouse_genomes_project 7 157991653 158019008 - MGP_NODShiLtJ_P0087281 Muc6 protein_coding protein_coding MGP_NODShiLtJ_T0087282.1 MGP_NODShiLtJ_G0033046.1 mouse_genomes_project 7 157991730 158018997 - MGP_NODShiLtJ_P0087282 Muc6 protein_coding protein_coding MGP_NODShiLtJ_T0085226.1 MGP_NODShiLtJ_G0032542.1 mouse_genomes_project 7 117863300 117864242 + MGP_NODShiLtJ_P0085226 Olfr678 protein_coding protein_coding MGP_NODShiLtJ_T0084673.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204597 109231938 - MGP_NODShiLtJ_P0084673 Aamdc protein_coding protein_coding MGP_NODShiLtJ_T0084674.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204600 109236929 - MGP_NODShiLtJ_P0084674 Aamdc protein_coding protein_coding MGP_NODShiLtJ_T0084675.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204606 109236848 - MGP_NODShiLtJ_P0084675 Aamdc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084676.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204613 109236936 - Aamdc protein_coding processed_transcript MGP_NODShiLtJ_T0084677.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204808 109236891 - MGP_NODShiLtJ_P0084677 Aamdc protein_coding protein_coding MGP_NODShiLtJ_T0084678.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204814 109236892 - MGP_NODShiLtJ_P0084678 Aamdc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084679.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204831 109236924 - MGP_NODShiLtJ_P0084679 Aamdc protein_coding protein_coding MGP_NODShiLtJ_T0084680.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204867 109236934 - MGP_NODShiLtJ_P0084680 Aamdc protein_coding protein_coding MGP_NODShiLtJ_T0084681.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204936 109236869 - MGP_NODShiLtJ_P0084681 Aamdc protein_coding protein_coding MGP_NODShiLtJ_T0084682.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109204981 109236832 - MGP_NODShiLtJ_P0084682 Aamdc protein_coding protein_coding MGP_NODShiLtJ_T0084683.1 MGP_NODShiLtJ_G0032335.1 mouse_genomes_project 7 109232184 109235677 - Aamdc protein_coding retained_intron MGP_NODShiLtJ_T0008939.1 MGP_NODShiLtJ_G0007193.1 mouse_genomes_project 7 141962572 141970781 - lincRNA lincRNA MGP_NODShiLtJ_T0018243.1 MGP_NODShiLtJ_G0015550.1 mouse_genomes_project 7 123066194 123072456 + 1700095J03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0084207.1 MGP_NODShiLtJ_G0032211.1 mouse_genomes_project 7 87851582 87858519 - MGP_NODShiLtJ_P0084207 Pex11a protein_coding protein_coding MGP_NODShiLtJ_T0084208.1 MGP_NODShiLtJ_G0032211.1 mouse_genomes_project 7 87852714 87858570 - Pex11a protein_coding processed_transcript MGP_NODShiLtJ_T0084209.1 MGP_NODShiLtJ_G0032211.1 mouse_genomes_project 7 87852875 87854349 - Pex11a protein_coding retained_intron MGP_NODShiLtJ_T0084210.1 MGP_NODShiLtJ_G0032211.1 mouse_genomes_project 7 87853396 87855981 - Pex11a protein_coding retained_intron MGP_NODShiLtJ_T0005241.1 MGP_NODShiLtJ_G0004441.1 mouse_genomes_project 7 143496725 143498436 - Gm45108 antisense antisense MGP_NODShiLtJ_T0081763.1 MGP_NODShiLtJ_G0031634.1 mouse_genomes_project 7 23961406 23969735 + MGP_NODShiLtJ_P0081763 Zfp108 protein_coding protein_coding MGP_NODShiLtJ_T0081764.1 MGP_NODShiLtJ_G0031634.1 mouse_genomes_project 7 23961620 23969803 + MGP_NODShiLtJ_P0081764 Zfp108 protein_coding protein_coding MGP_NODShiLtJ_T0081765.1 MGP_NODShiLtJ_G0031634.1 mouse_genomes_project 7 23964256 23969274 + MGP_NODShiLtJ_P0081765 Zfp108 protein_coding protein_coding MGP_NODShiLtJ_T0086537.1 MGP_NODShiLtJ_G0032871.1 mouse_genomes_project 7 143176681 143182810 + MGP_NODShiLtJ_P0086537 Bckdk protein_coding protein_coding MGP_NODShiLtJ_T0086538.1 MGP_NODShiLtJ_G0032871.1 mouse_genomes_project 7 143176702 143178564 + Bckdk protein_coding retained_intron MGP_NODShiLtJ_T0086539.1 MGP_NODShiLtJ_G0032871.1 mouse_genomes_project 7 143177239 143178773 + MGP_NODShiLtJ_P0086539 Bckdk protein_coding protein_coding MGP_NODShiLtJ_T0086540.1 MGP_NODShiLtJ_G0032871.1 mouse_genomes_project 7 143177361 143181215 + MGP_NODShiLtJ_P0086540 Bckdk protein_coding protein_coding MGP_NODShiLtJ_T0086541.1 MGP_NODShiLtJ_G0032871.1 mouse_genomes_project 7 143177361 143181215 + MGP_NODShiLtJ_P0086541 Bckdk protein_coding protein_coding MGP_NODShiLtJ_T0086542.1 MGP_NODShiLtJ_G0032871.1 mouse_genomes_project 7 143177523 143178985 + MGP_NODShiLtJ_P0086542 Bckdk protein_coding protein_coding MGP_NODShiLtJ_T0086543.1 MGP_NODShiLtJ_G0032871.1 mouse_genomes_project 7 143179841 143181207 + MGP_NODShiLtJ_P0086543 Bckdk protein_coding protein_coding MGP_NODShiLtJ_T0084386.1 MGP_NODShiLtJ_G0032242.1 mouse_genomes_project 7 89388491 89445337 + MGP_NODShiLtJ_P0084386 Slc28a1 protein_coding protein_coding MGP_NODShiLtJ_T0084387.1 MGP_NODShiLtJ_G0032242.1 mouse_genomes_project 7 89388546 89445337 + MGP_NODShiLtJ_P0084387 Slc28a1 protein_coding protein_coding MGP_NODShiLtJ_T0086744.1 MGP_NODShiLtJ_G0032907.1 mouse_genomes_project 7 146951511 146955084 - MGP_NODShiLtJ_P0086744 1700007K09Rik protein_coding protein_coding MGP_NODShiLtJ_T0086745.1 MGP_NODShiLtJ_G0032907.1 mouse_genomes_project 7 146951666 146952893 - MGP_NODShiLtJ_P0086745 1700007K09Rik protein_coding protein_coding MGP_NODShiLtJ_T0084119.1 MGP_NODShiLtJ_G0032197.1 mouse_genomes_project 7 86870427 86896676 - MGP_NODShiLtJ_P0084119 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084120.1 MGP_NODShiLtJ_G0032197.1 mouse_genomes_project 7 86871151 86883661 - MGP_NODShiLtJ_P0084120 protein_coding protein_coding MGP_NODShiLtJ_T0084121.1 MGP_NODShiLtJ_G0032197.1 mouse_genomes_project 7 86879816 86892722 - MGP_NODShiLtJ_P0084121 protein_coding protein_coding MGP_NODShiLtJ_T0084829.1 MGP_NODShiLtJ_G0032373.1 mouse_genomes_project 7 112109353 112167667 + MGP_NODShiLtJ_P0084829 Pgm2l1 protein_coding protein_coding MGP_NODShiLtJ_T0084830.1 MGP_NODShiLtJ_G0032373.1 mouse_genomes_project 7 112109647 112169740 + MGP_NODShiLtJ_P0084830 Pgm2l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084831.1 MGP_NODShiLtJ_G0032373.1 mouse_genomes_project 7 112109669 112171199 + MGP_NODShiLtJ_P0084831 Pgm2l1 protein_coding protein_coding MGP_NODShiLtJ_T0081729.1 MGP_NODShiLtJ_G0031615.1 mouse_genomes_project 7 23085415 23087008 - MGP_NODShiLtJ_P0081729 protein_coding protein_coding MGP_NODShiLtJ_T0082474.1 MGP_NODShiLtJ_G0031814.1 mouse_genomes_project 7 30712199 30728267 + Zfp260 protein_coding processed_transcript MGP_NODShiLtJ_T0082475.1 MGP_NODShiLtJ_G0031814.1 mouse_genomes_project 7 30712216 30731598 + MGP_NODShiLtJ_P0082475 Zfp260 protein_coding protein_coding MGP_NODShiLtJ_T0082476.1 MGP_NODShiLtJ_G0031814.1 mouse_genomes_project 7 30712584 30722325 + Zfp260 protein_coding retained_intron MGP_NODShiLtJ_T0082477.1 MGP_NODShiLtJ_G0031814.1 mouse_genomes_project 7 30712591 30728735 + MGP_NODShiLtJ_P0082477 Zfp260 protein_coding protein_coding MGP_NODShiLtJ_T0082478.1 MGP_NODShiLtJ_G0031814.1 mouse_genomes_project 7 30712600 30731595 + Zfp260 protein_coding processed_transcript MGP_NODShiLtJ_T0082479.1 MGP_NODShiLtJ_G0031814.1 mouse_genomes_project 7 30712607 30731590 + MGP_NODShiLtJ_P0082479 Zfp260 protein_coding protein_coding MGP_NODShiLtJ_T0082480.1 MGP_NODShiLtJ_G0031814.1 mouse_genomes_project 7 30720372 30722308 + Zfp260 protein_coding retained_intron MGP_NODShiLtJ_T0002242.1 MGP_NODShiLtJ_G0002153.1 mouse_genomes_project 7 130728121 130729078 - TEC TEC MGP_NODShiLtJ_T0085395.1 MGP_NODShiLtJ_G0032615.1 mouse_genomes_project 7 121443990 121445101 + MGP_NODShiLtJ_P0085395 Olfr479 protein_coding protein_coding MGP_NODShiLtJ_T0083830.1 MGP_NODShiLtJ_G0032139.1 mouse_genomes_project 7 64575207 64734611 + MGP_NODShiLtJ_P0083830 protein_coding protein_coding MGP_NODShiLtJ_T0083831.1 MGP_NODShiLtJ_G0032139.1 mouse_genomes_project 7 64575258 64665582 + MGP_NODShiLtJ_P0083831 protein_coding protein_coding MGP_NODShiLtJ_T0083832.1 MGP_NODShiLtJ_G0032139.1 mouse_genomes_project 7 64575258 64739320 + MGP_NODShiLtJ_P0083832 protein_coding protein_coding MGP_NODShiLtJ_T0083833.1 MGP_NODShiLtJ_G0032139.1 mouse_genomes_project 7 64575633 64675288 + protein_coding processed_transcript MGP_NODShiLtJ_T0083834.1 MGP_NODShiLtJ_G0032139.1 mouse_genomes_project 7 64575739 64675551 + MGP_NODShiLtJ_P0083834 protein_coding protein_coding MGP_NODShiLtJ_T0083835.1 MGP_NODShiLtJ_G0032139.1 mouse_genomes_project 7 64602763 64665492 + MGP_NODShiLtJ_P0083835 protein_coding protein_coding MGP_NODShiLtJ_T0083836.1 MGP_NODShiLtJ_G0032139.1 mouse_genomes_project 7 64730719 64732828 + protein_coding retained_intron MGP_NODShiLtJ_T0085767.1 MGP_NODShiLtJ_G0032719.1 mouse_genomes_project 7 134029341 134068627 - MGP_NODShiLtJ_P0085767 Pdilt protein_coding protein_coding MGP_NODShiLtJ_T0081577.1 MGP_NODShiLtJ_G0031571.1 mouse_genomes_project 7 18516122 18525993 - MGP_NODShiLtJ_P0081577 Gipr protein_coding protein_coding MGP_NODShiLtJ_T0081578.1 MGP_NODShiLtJ_G0031571.1 mouse_genomes_project 7 18516125 18525993 - Gipr protein_coding retained_intron MGP_NODShiLtJ_T0081579.1 MGP_NODShiLtJ_G0031571.1 mouse_genomes_project 7 18522153 18525993 - MGP_NODShiLtJ_P0081579 Gipr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081580.1 MGP_NODShiLtJ_G0031571.1 mouse_genomes_project 7 18522320 18524956 - Gipr protein_coding retained_intron MGP_NODShiLtJ_T0087483.1 MGP_NODShiLtJ_G0033089.1 mouse_genomes_project 7 160371661 160399524 - MGP_NODShiLtJ_P0087483 Nadsyn1 protein_coding protein_coding MGP_NODShiLtJ_T0087484.1 MGP_NODShiLtJ_G0033089.1 mouse_genomes_project 7 160371927 160399470 - MGP_NODShiLtJ_P0087484 Nadsyn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087485.1 MGP_NODShiLtJ_G0033089.1 mouse_genomes_project 7 160371946 160399525 - MGP_NODShiLtJ_P0087485 Nadsyn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087486.1 MGP_NODShiLtJ_G0033089.1 mouse_genomes_project 7 160373926 160374919 - Nadsyn1 protein_coding retained_intron MGP_NODShiLtJ_T0087487.1 MGP_NODShiLtJ_G0033089.1 mouse_genomes_project 7 160389493 160399501 - MGP_NODShiLtJ_P0087487 Nadsyn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087488.1 MGP_NODShiLtJ_G0033089.1 mouse_genomes_project 7 160390016 160399431 - Nadsyn1 protein_coding retained_intron MGP_NODShiLtJ_T0087489.1 MGP_NODShiLtJ_G0033089.1 mouse_genomes_project 7 160390154 160399488 - MGP_NODShiLtJ_P0087489 Nadsyn1 protein_coding protein_coding MGP_NODShiLtJ_T0087490.1 MGP_NODShiLtJ_G0033089.1 mouse_genomes_project 7 160392068 160399532 - Nadsyn1 protein_coding retained_intron MGP_NODShiLtJ_T0011571.1 MGP_NODShiLtJ_G0009704.1 mouse_genomes_project 7 25814301 25814408 + Gm23921 misc_RNA misc_RNA MGP_NODShiLtJ_T0081880.1 MGP_NODShiLtJ_G0031664.1 mouse_genomes_project 7 24788338 24791314 - MGP_NODShiLtJ_P0081880 Rabac1 protein_coding protein_coding MGP_NODShiLtJ_T0081881.1 MGP_NODShiLtJ_G0031664.1 mouse_genomes_project 7 24788339 24790562 - Rabac1 protein_coding retained_intron MGP_NODShiLtJ_T0081882.1 MGP_NODShiLtJ_G0031664.1 mouse_genomes_project 7 24788347 24790604 - Rabac1 protein_coding processed_transcript MGP_NODShiLtJ_T0081883.1 MGP_NODShiLtJ_G0031664.1 mouse_genomes_project 7 24788347 24791198 - MGP_NODShiLtJ_P0081883 Rabac1 protein_coding protein_coding MGP_NODShiLtJ_T0081884.1 MGP_NODShiLtJ_G0031664.1 mouse_genomes_project 7 24788348 24790805 - Rabac1 protein_coding processed_transcript MGP_NODShiLtJ_T0081885.1 MGP_NODShiLtJ_G0031664.1 mouse_genomes_project 7 24790084 24791112 - Rabac1 protein_coding retained_intron MGP_NODShiLtJ_T0085185.1 MGP_NODShiLtJ_G0032515.1 mouse_genomes_project 7 116853710 116960149 - MGP_NODShiLtJ_P0085185 protein_coding protein_coding MGP_NODShiLtJ_T0085188.1 MGP_NODShiLtJ_G0032515.1 mouse_genomes_project 7 116951769 116960136 - MGP_NODShiLtJ_P0085188 protein_coding protein_coding MGP_NODShiLtJ_T0084554.1 MGP_NODShiLtJ_G0032304.1 mouse_genomes_project 7 99611609 99617350 + MGP_NODShiLtJ_P0084554 Fzd4 protein_coding protein_coding MGP_NODShiLtJ_T0086108.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141703133 141718959 - MGP_NODShiLtJ_P0086108 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086109.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141703326 141716389 - MGP_NODShiLtJ_P0086109 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086110.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141703326 141717422 - MGP_NODShiLtJ_P0086110 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086111.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141704012 141716332 - MGP_NODShiLtJ_P0086111 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086112.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141704016 141708235 - Cln3 protein_coding processed_transcript MGP_NODShiLtJ_T0086113.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141704034 141704655 - Cln3 protein_coding processed_transcript MGP_NODShiLtJ_T0086114.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141704048 141711003 - Cln3 protein_coding retained_intron MGP_NODShiLtJ_T0086115.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141711498 141717449 - Cln3 protein_coding retained_intron MGP_NODShiLtJ_T0086116.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141712350 141716368 - Cln3 protein_coding processed_transcript MGP_NODShiLtJ_T0086117.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141712386 141716504 - MGP_NODShiLtJ_P0086117 Cln3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086118.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141712402 141717362 - MGP_NODShiLtJ_P0086118 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086119.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141712548 141716665 - MGP_NODShiLtJ_P0086119 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086120.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141713411 141716256 - Cln3 protein_coding retained_intron MGP_NODShiLtJ_T0086121.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141713972 141716458 - Cln3 protein_coding retained_intron MGP_NODShiLtJ_T0086122.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141714654 141716484 - Cln3 protein_coding processed_transcript MGP_NODShiLtJ_T0086123.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141714799 141716708 - MGP_NODShiLtJ_P0086123 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086124.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141714802 141717720 - MGP_NODShiLtJ_P0086124 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086125.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141714856 141716696 - MGP_NODShiLtJ_P0086125 Cln3 protein_coding protein_coding MGP_NODShiLtJ_T0086126.1 MGP_NODShiLtJ_G0032794.1 mouse_genomes_project 7 141716463 141717928 - Cln3 protein_coding processed_transcript MGP_NODShiLtJ_T0081502.1 MGP_NODShiLtJ_G0031546.1 mouse_genomes_project 7 17721411 17733979 - MGP_NODShiLtJ_P0081502 protein_coding protein_coding MGP_NODShiLtJ_T0008844.1 MGP_NODShiLtJ_G0007135.1 mouse_genomes_project 7 81224380 81234725 + lincRNA lincRNA MGP_NODShiLtJ_T0102066.1 MGP_NODShiLtJ_G0040233.1 mouse_genomes_project 7 9779667 9779845 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087121.1 MGP_NODShiLtJ_G0033021.1 mouse_genomes_project 7 157508622 157513478 - MGP_NODShiLtJ_P0087121 Hras protein_coding protein_coding MGP_NODShiLtJ_T0087122.1 MGP_NODShiLtJ_G0033021.1 mouse_genomes_project 7 157509451 157513522 - MGP_NODShiLtJ_P0087122 Hras protein_coding protein_coding MGP_NODShiLtJ_T0087123.1 MGP_NODShiLtJ_G0033021.1 mouse_genomes_project 7 157510443 157513512 - Hras protein_coding retained_intron MGP_NODShiLtJ_T0087124.1 MGP_NODShiLtJ_G0033021.1 mouse_genomes_project 7 157510443 157513523 - MGP_NODShiLtJ_P0087124 Hras protein_coding protein_coding MGP_NODShiLtJ_T0087125.1 MGP_NODShiLtJ_G0033021.1 mouse_genomes_project 7 157510444 157512022 - Hras protein_coding processed_transcript MGP_NODShiLtJ_T0087126.1 MGP_NODShiLtJ_G0033021.1 mouse_genomes_project 7 157510447 157511495 - Hras protein_coding processed_transcript MGP_NODShiLtJ_T0087127.1 MGP_NODShiLtJ_G0033021.1 mouse_genomes_project 7 157510447 157513400 - MGP_NODShiLtJ_P0087127 Hras protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083321.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47618844 47624377 + MGP_NODShiLtJ_P0083321 Pnkp protein_coding protein_coding MGP_NODShiLtJ_T0083322.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47618856 47619211 + MGP_NODShiLtJ_P0083322 Pnkp protein_coding protein_coding MGP_NODShiLtJ_T0083323.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47618864 47624719 + MGP_NODShiLtJ_P0083323 Pnkp protein_coding protein_coding MGP_NODShiLtJ_T0083324.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47618872 47624383 + Pnkp protein_coding retained_intron MGP_NODShiLtJ_T0083325.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47618878 47622151 + MGP_NODShiLtJ_P0083325 Pnkp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083326.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47619045 47623078 + MGP_NODShiLtJ_P0083326 Pnkp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083327.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47619047 47624376 + MGP_NODShiLtJ_P0083327 Pnkp protein_coding protein_coding MGP_NODShiLtJ_T0083328.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47619053 47624377 + MGP_NODShiLtJ_P0083328 Pnkp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083329.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47619084 47624368 + MGP_NODShiLtJ_P0083329 Pnkp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083330.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47619099 47624377 + MGP_NODShiLtJ_P0083330 Pnkp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083331.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47621415 47624375 + Pnkp protein_coding retained_intron MGP_NODShiLtJ_T0083332.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47622149 47623096 + Pnkp protein_coding retained_intron MGP_NODShiLtJ_T0083333.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47623101 47624377 + MGP_NODShiLtJ_P0083333 Pnkp protein_coding non_stop_decay MGP_NODShiLtJ_T0083334.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47623240 47624375 + MGP_NODShiLtJ_P0083334 Pnkp protein_coding protein_coding MGP_NODShiLtJ_T0083335.1 MGP_NODShiLtJ_G0031999.1 mouse_genomes_project 7 47623423 47624397 + Pnkp protein_coding retained_intron MGP_NODShiLtJ_T0084211.1 MGP_NODShiLtJ_G0032212.1 mouse_genomes_project 7 87858612 87905045 + MGP_NODShiLtJ_P0084211 Wdr93 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0015571.1 MGP_NODShiLtJ_G0013679.1 mouse_genomes_project 7 10350007 10350662 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084336.1 MGP_NODShiLtJ_G0032234.1 mouse_genomes_project 7 88800952 88909114 - MGP_NODShiLtJ_P0084336 Crtc3 protein_coding protein_coding MGP_NODShiLtJ_T0084337.1 MGP_NODShiLtJ_G0032234.1 mouse_genomes_project 7 88808137 88826734 - MGP_NODShiLtJ_P0084337 Crtc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084338.1 MGP_NODShiLtJ_G0032234.1 mouse_genomes_project 7 88811030 88815481 - Crtc3 protein_coding retained_intron MGP_NODShiLtJ_T0084339.1 MGP_NODShiLtJ_G0032234.1 mouse_genomes_project 7 88811092 88846153 - MGP_NODShiLtJ_P0084339 Crtc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084340.1 MGP_NODShiLtJ_G0032234.1 mouse_genomes_project 7 88834881 88846234 - Crtc3 protein_coding retained_intron MGP_NODShiLtJ_T0084341.1 MGP_NODShiLtJ_G0032234.1 mouse_genomes_project 7 88891361 88909114 - Crtc3 protein_coding retained_intron MGP_NODShiLtJ_T0018234.1 MGP_NODShiLtJ_G0015546.1 mouse_genomes_project 7 93283333 93381576 + 2610206C17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018235.1 MGP_NODShiLtJ_G0015546.1 mouse_genomes_project 7 93380729 93381047 + 2610206C17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0100783.1 MGP_NODShiLtJ_G0039177.1 mouse_genomes_project 7 142769422 142769552 + Snora30 snoRNA snoRNA MGP_NODShiLtJ_T0010727.1 MGP_NODShiLtJ_G0008860.1 mouse_genomes_project 7 1522521 1522617 - Gm24605 miRNA miRNA MGP_NODShiLtJ_T0018185.1 MGP_NODShiLtJ_G0015529.1 mouse_genomes_project 7 46320263 46436375 - 2310002F09Rik processed_transcript antisense MGP_NODShiLtJ_T0018186.1 MGP_NODShiLtJ_G0015529.1 mouse_genomes_project 7 46376185 46379513 - 2310002F09Rik processed_transcript antisense MGP_NODShiLtJ_T0018187.1 MGP_NODShiLtJ_G0015529.1 mouse_genomes_project 7 46389884 46390489 - 2310002F09Rik processed_transcript TEC MGP_NODShiLtJ_T0018188.1 MGP_NODShiLtJ_G0015529.1 mouse_genomes_project 7 46435253 46436388 - 2310002F09Rik processed_transcript antisense MGP_NODShiLtJ_T0018175.1 MGP_NODShiLtJ_G0015521.1 mouse_genomes_project 7 24613660 24638677 + Gm5893 processed_transcript lincRNA MGP_NODShiLtJ_T0018176.1 MGP_NODShiLtJ_G0015521.1 mouse_genomes_project 7 24613660 24638660 + Gm5893 processed_transcript processed_transcript MGP_NODShiLtJ_T0018177.1 MGP_NODShiLtJ_G0015521.1 mouse_genomes_project 7 24616974 24620738 + Gm5893 processed_transcript retained_intron MGP_NODShiLtJ_T0085523.1 MGP_NODShiLtJ_G0032670.1 mouse_genomes_project 7 124654943 124717174 - MGP_NODShiLtJ_P0085523 Mrvi1 protein_coding protein_coding MGP_NODShiLtJ_T0085524.1 MGP_NODShiLtJ_G0032670.1 mouse_genomes_project 7 124654944 124737702 - MGP_NODShiLtJ_P0085524 Mrvi1 protein_coding protein_coding MGP_NODShiLtJ_T0085525.1 MGP_NODShiLtJ_G0032670.1 mouse_genomes_project 7 124654949 124735259 - MGP_NODShiLtJ_P0085525 Mrvi1 protein_coding protein_coding MGP_NODShiLtJ_T0085526.1 MGP_NODShiLtJ_G0032670.1 mouse_genomes_project 7 124708492 124712413 - Mrvi1 protein_coding processed_transcript MGP_NODShiLtJ_T0085527.1 MGP_NODShiLtJ_G0032670.1 mouse_genomes_project 7 124713072 124717436 - Mrvi1 protein_coding retained_intron MGP_NODShiLtJ_T0085528.1 MGP_NODShiLtJ_G0032670.1 mouse_genomes_project 7 124717155 124771163 - MGP_NODShiLtJ_P0085528 Mrvi1 protein_coding protein_coding MGP_NODShiLtJ_T0010747.1 MGP_NODShiLtJ_G0008880.1 mouse_genomes_project 7 29009283 29009343 - Mir7049 miRNA miRNA MGP_NODShiLtJ_T0081220.1 MGP_NODShiLtJ_G0031458.1 mouse_genomes_project 7 11024124 11038863 - MGP_NODShiLtJ_P0081220 Zfp329 protein_coding protein_coding MGP_NODShiLtJ_T0081221.1 MGP_NODShiLtJ_G0031458.1 mouse_genomes_project 7 11025202 11028239 - Zfp329 protein_coding processed_transcript MGP_NODShiLtJ_T0081222.1 MGP_NODShiLtJ_G0031458.1 mouse_genomes_project 7 11026247 11038867 - MGP_NODShiLtJ_P0081222 Zfp329 protein_coding protein_coding MGP_NODShiLtJ_T0081223.1 MGP_NODShiLtJ_G0031458.1 mouse_genomes_project 7 11026263 11038861 - MGP_NODShiLtJ_P0081223 Zfp329 protein_coding protein_coding MGP_NODShiLtJ_T0085392.1 MGP_NODShiLtJ_G0032612.1 mouse_genomes_project 7 121368313 121371015 + MGP_NODShiLtJ_P0085392 protein_coding protein_coding MGP_NODShiLtJ_T0015588.1 MGP_NODShiLtJ_G0013696.1 mouse_genomes_project 7 15380264 15381032 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005082.1 MGP_NODShiLtJ_G0004333.1 mouse_genomes_project 7 1095538 1146731 - 9430041J12Rik antisense antisense MGP_NODShiLtJ_T0005083.1 MGP_NODShiLtJ_G0004333.1 mouse_genomes_project 7 1095568 1146437 - 9430041J12Rik antisense antisense MGP_NODShiLtJ_T0005084.1 MGP_NODShiLtJ_G0004333.1 mouse_genomes_project 7 1095877 1146437 - 9430041J12Rik antisense antisense MGP_NODShiLtJ_T0005085.1 MGP_NODShiLtJ_G0004333.1 mouse_genomes_project 7 1145899 1146437 - 9430041J12Rik antisense pseudogene MGP_NODShiLtJ_T0008821.1 MGP_NODShiLtJ_G0007115.1 mouse_genomes_project 7 77418318 77436654 - Gm28258 lincRNA lincRNA MGP_NODShiLtJ_T0081060.1 MGP_NODShiLtJ_G0031373.1 mouse_genomes_project 7 1920445 1925547 - MGP_NODShiLtJ_P0081060 Tmem238 protein_coding protein_coding MGP_NODShiLtJ_T0081061.1 MGP_NODShiLtJ_G0031373.1 mouse_genomes_project 7 1921060 1924964 - MGP_NODShiLtJ_P0081061 Tmem238 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083151.1 MGP_NODShiLtJ_G0031968.1 mouse_genomes_project 7 46537421 46542066 + MGP_NODShiLtJ_P0083151 Klk4 protein_coding protein_coding MGP_NODShiLtJ_T0085228.1 MGP_NODShiLtJ_G0032544.1 mouse_genomes_project 7 117948193 117949216 + MGP_NODShiLtJ_P0085228 Olfr681 protein_coding protein_coding MGP_NODShiLtJ_T0002172.1 MGP_NODShiLtJ_G0002084.1 mouse_genomes_project 7 41461015 41464023 + TEC TEC MGP_NODShiLtJ_T0101402.1 MGP_NODShiLtJ_G0039607.1 mouse_genomes_project 7 46812852 46872787 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101403.1 MGP_NODShiLtJ_G0039607.1 mouse_genomes_project 7 46812854 46870041 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0083684.1 MGP_NODShiLtJ_G0032102.1 mouse_genomes_project 7 50601927 50626303 - MGP_NODShiLtJ_P0083684 protein_coding protein_coding MGP_NODShiLtJ_T0083685.1 MGP_NODShiLtJ_G0032102.1 mouse_genomes_project 7 50601928 50672204 - MGP_NODShiLtJ_P0083685 protein_coding protein_coding MGP_NODShiLtJ_T0081997.1 MGP_NODShiLtJ_G0031690.1 mouse_genomes_project 7 25617008 25637983 + MGP_NODShiLtJ_P0081997 Tgfb1 protein_coding protein_coding MGP_NODShiLtJ_T0081998.1 MGP_NODShiLtJ_G0031690.1 mouse_genomes_project 7 25618154 25618731 + Tgfb1 protein_coding processed_transcript MGP_NODShiLtJ_T0081999.1 MGP_NODShiLtJ_G0031690.1 mouse_genomes_project 7 25618896 25621470 + Tgfb1 protein_coding retained_intron MGP_NODShiLtJ_T0082000.1 MGP_NODShiLtJ_G0031690.1 mouse_genomes_project 7 25618933 25629378 + MGP_NODShiLtJ_P0082000 Tgfb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082001.1 MGP_NODShiLtJ_G0031690.1 mouse_genomes_project 7 25624073 25629339 + Tgfb1 protein_coding retained_intron MGP_NODShiLtJ_T0086457.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142857113 142864506 - MGP_NODShiLtJ_P0086457 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0086458.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142857113 142865345 - MGP_NODShiLtJ_P0086458 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0086459.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142857113 142865288 - MGP_NODShiLtJ_P0086459 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0086460.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142858537 142864940 - MGP_NODShiLtJ_P0086460 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0086461.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142858669 142865331 - MGP_NODShiLtJ_P0086461 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0086462.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142858838 142865870 - MGP_NODShiLtJ_P0086462 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0086463.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142861986 142864433 - MGP_NODShiLtJ_P0086463 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0086464.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142862066 142865273 - MGP_NODShiLtJ_P0086464 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0086465.1 MGP_NODShiLtJ_G0032855.1 mouse_genomes_project 7 142862133 142864438 - MGP_NODShiLtJ_P0086465 Zfp629 protein_coding protein_coding MGP_NODShiLtJ_T0081575.1 MGP_NODShiLtJ_G0031570.1 mouse_genomes_project 7 18508446 18513612 + MGP_NODShiLtJ_P0081575 Snrpd2 protein_coding protein_coding MGP_NODShiLtJ_T0081576.1 MGP_NODShiLtJ_G0031570.1 mouse_genomes_project 7 18508583 18509818 + Snrpd2 protein_coding retained_intron MGP_NODShiLtJ_T0005260.1 MGP_NODShiLtJ_G0004455.1 mouse_genomes_project 7 159837956 159845818 - antisense antisense MGP_NODShiLtJ_T0083310.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47609599 47616017 + MGP_NODShiLtJ_P0083310 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083311.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47609832 47616030 + MGP_NODShiLtJ_P0083311 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083312.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47609952 47616026 + Akt1s1 protein_coding retained_intron MGP_NODShiLtJ_T0083313.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47610189 47613555 + MGP_NODShiLtJ_P0083313 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083314.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47610237 47615345 + MGP_NODShiLtJ_P0083314 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083315.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47610615 47614645 + MGP_NODShiLtJ_P0083315 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083316.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47610624 47616027 + MGP_NODShiLtJ_P0083316 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083317.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47611004 47613472 + MGP_NODShiLtJ_P0083317 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083318.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47612102 47613247 + MGP_NODShiLtJ_P0083318 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083319.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47613179 47615295 + MGP_NODShiLtJ_P0083319 Akt1s1 protein_coding protein_coding MGP_NODShiLtJ_T0083320.1 MGP_NODShiLtJ_G0031998.1 mouse_genomes_project 7 47613528 47615253 + Akt1s1 protein_coding retained_intron MGP_NODShiLtJ_T0015788.1 MGP_NODShiLtJ_G0013896.1 mouse_genomes_project 7 137711956 137712283 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015666.1 MGP_NODShiLtJ_G0013774.1 mouse_genomes_project 7 43223910 43231573 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085461.1 MGP_NODShiLtJ_G0032654.1 mouse_genomes_project 7 123383704 123384363 - MGP_NODShiLtJ_P0085461 Ascl3 protein_coding protein_coding MGP_NODShiLtJ_T0085112.1 MGP_NODShiLtJ_G0032454.1 mouse_genomes_project 7 115377858 115378812 - MGP_NODShiLtJ_P0085112 Olfr589 protein_coding protein_coding MGP_NODShiLtJ_T0008759.1 MGP_NODShiLtJ_G0007071.1 mouse_genomes_project 7 37060582 37067215 + Gm26790 lincRNA lincRNA MGP_NODShiLtJ_T0081416.1 MGP_NODShiLtJ_G0031521.1 mouse_genomes_project 7 15620565 15624009 + MGP_NODShiLtJ_P0081416 Ceacam9 protein_coding protein_coding MGP_NODShiLtJ_T0081417.1 MGP_NODShiLtJ_G0031521.1 mouse_genomes_project 7 15620594 15623021 + MGP_NODShiLtJ_P0081417 Ceacam9 protein_coding protein_coding MGP_NODShiLtJ_T0087482.1 MGP_NODShiLtJ_G0033088.1 mouse_genomes_project 7 160352645 160359556 - MGP_NODShiLtJ_P0087482 Mrgpre protein_coding protein_coding MGP_NODShiLtJ_T0083521.1 MGP_NODShiLtJ_G0032057.1 mouse_genomes_project 7 48549770 48554563 + MGP_NODShiLtJ_P0083521 Car11 protein_coding protein_coding MGP_NODShiLtJ_T0087048.1 MGP_NODShiLtJ_G0033001.1 mouse_genomes_project 7 157120011 157123225 + MGP_NODShiLtJ_P0087048 Odf3 protein_coding protein_coding MGP_NODShiLtJ_T0087049.1 MGP_NODShiLtJ_G0033001.1 mouse_genomes_project 7 157120029 157123215 + MGP_NODShiLtJ_P0087049 Odf3 protein_coding protein_coding MGP_NODShiLtJ_T0087050.1 MGP_NODShiLtJ_G0033001.1 mouse_genomes_project 7 157120030 157123218 + Odf3 protein_coding retained_intron MGP_NODShiLtJ_T0086958.1 MGP_NODShiLtJ_G0032960.1 mouse_genomes_project 7 155975790 156025119 + MGP_NODShiLtJ_P0086958 Adgra1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0086959.1 MGP_NODShiLtJ_G0032960.1 mouse_genomes_project 7 155975793 156025120 + MGP_NODShiLtJ_P0086959 Adgra1 protein_coding protein_coding MGP_NODShiLtJ_T0086960.1 MGP_NODShiLtJ_G0032960.1 mouse_genomes_project 7 155975984 155989216 + Adgra1 protein_coding processed_transcript MGP_NODShiLtJ_T0086961.1 MGP_NODShiLtJ_G0032960.1 mouse_genomes_project 7 155976581 155982811 + Adgra1 protein_coding retained_intron MGP_NODShiLtJ_T0085405.1 MGP_NODShiLtJ_G0032625.1 mouse_genomes_project 7 121867830 121868777 + MGP_NODShiLtJ_P0085405 protein_coding protein_coding MGP_NODShiLtJ_T0002181.1 MGP_NODShiLtJ_G0002093.1 mouse_genomes_project 7 49263755 49264271 + TEC TEC MGP_NODShiLtJ_T0099525.1 MGP_NODShiLtJ_G0037919.1 mouse_genomes_project 7 143368131 143368287 - Gm22809 snRNA snRNA MGP_NODShiLtJ_T0085210.1 MGP_NODShiLtJ_G0032527.1 mouse_genomes_project 7 117256368 117257326 + MGP_NODShiLtJ_P0085210 Olfr657 protein_coding protein_coding MGP_NODShiLtJ_T0085489.1 MGP_NODShiLtJ_G0032663.1 mouse_genomes_project 7 123814150 123835367 + MGP_NODShiLtJ_P0085489 Wee1 protein_coding protein_coding MGP_NODShiLtJ_T0102131.1 MGP_NODShiLtJ_G0040297.1 mouse_genomes_project 7 46612512 46693496 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084151.1 MGP_NODShiLtJ_G0032203.1 mouse_genomes_project 7 87369080 87459332 + MGP_NODShiLtJ_P0084151 Abhd2 protein_coding protein_coding MGP_NODShiLtJ_T0084152.1 MGP_NODShiLtJ_G0032203.1 mouse_genomes_project 7 87369135 87439211 + Abhd2 protein_coding processed_transcript MGP_NODShiLtJ_T0084513.1 MGP_NODShiLtJ_G0032286.1 mouse_genomes_project 7 95776179 95777219 - MGP_NODShiLtJ_P0084513 Olfr303 protein_coding protein_coding MGP_NODShiLtJ_T0086446.1 MGP_NODShiLtJ_G0032853.1 mouse_genomes_project 7 142832451 142838669 - MGP_NODShiLtJ_P0086446 Ccdc189 protein_coding protein_coding MGP_NODShiLtJ_T0086447.1 MGP_NODShiLtJ_G0032853.1 mouse_genomes_project 7 142833428 142836409 - MGP_NODShiLtJ_P0086447 Ccdc189 protein_coding protein_coding MGP_NODShiLtJ_T0086448.1 MGP_NODShiLtJ_G0032853.1 mouse_genomes_project 7 142833455 142835791 - Ccdc189 protein_coding retained_intron MGP_NODShiLtJ_T0086449.1 MGP_NODShiLtJ_G0032853.1 mouse_genomes_project 7 142835281 142838243 - Ccdc189 protein_coding retained_intron MGP_NODShiLtJ_T0086450.1 MGP_NODShiLtJ_G0032853.1 mouse_genomes_project 7 142837135 142838454 - Ccdc189 protein_coding retained_intron MGP_NODShiLtJ_T0083527.1 MGP_NODShiLtJ_G0032059.1 mouse_genomes_project 7 48559370 48567961 - MGP_NODShiLtJ_P0083527 Sphk2 protein_coding protein_coding MGP_NODShiLtJ_T0083528.1 MGP_NODShiLtJ_G0032059.1 mouse_genomes_project 7 48560170 48567861 - MGP_NODShiLtJ_P0083528 Sphk2 protein_coding protein_coding MGP_NODShiLtJ_T0083529.1 MGP_NODShiLtJ_G0032059.1 mouse_genomes_project 7 48560188 48565111 - MGP_NODShiLtJ_P0083529 Sphk2 protein_coding protein_coding MGP_NODShiLtJ_T0015601.1 MGP_NODShiLtJ_G0013709.1 mouse_genomes_project 7 19363711 19364284 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102109.1 MGP_NODShiLtJ_G0040275.1 mouse_genomes_project 7 26147213 26162133 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083417.1 MGP_NODShiLtJ_G0032032.1 mouse_genomes_project 7 48139111 48169932 - MGP_NODShiLtJ_P0083417 Ppfia3 protein_coding protein_coding MGP_NODShiLtJ_T0083418.1 MGP_NODShiLtJ_G0032032.1 mouse_genomes_project 7 48139112 48140757 - Ppfia3 protein_coding processed_transcript MGP_NODShiLtJ_T0083419.1 MGP_NODShiLtJ_G0032032.1 mouse_genomes_project 7 48139112 48170237 - MGP_NODShiLtJ_P0083419 Ppfia3 protein_coding protein_coding MGP_NODShiLtJ_T0083420.1 MGP_NODShiLtJ_G0032032.1 mouse_genomes_project 7 48139258 48170237 - Ppfia3 protein_coding retained_intron MGP_NODShiLtJ_T0083421.1 MGP_NODShiLtJ_G0032032.1 mouse_genomes_project 7 48139260 48163331 - MGP_NODShiLtJ_P0083421 Ppfia3 protein_coding protein_coding MGP_NODShiLtJ_T0083422.1 MGP_NODShiLtJ_G0032032.1 mouse_genomes_project 7 48139266 48140748 - Ppfia3 protein_coding processed_transcript MGP_NODShiLtJ_T0083423.1 MGP_NODShiLtJ_G0032032.1 mouse_genomes_project 7 48139807 48141146 - Ppfia3 protein_coding retained_intron MGP_NODShiLtJ_T0015662.1 MGP_NODShiLtJ_G0013770.1 mouse_genomes_project 7 43223853 43231624 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087296.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158307038 158361085 + MGP_NODShiLtJ_P0087296 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0087297.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158307038 158366370 + MGP_NODShiLtJ_P0087297 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0087298.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158307133 158361252 + MGP_NODShiLtJ_P0087298 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0087299.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158308275 158365053 + MGP_NODShiLtJ_P0087299 Brsk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087300.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158308351 158363030 + MGP_NODShiLtJ_P0087300 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0087301.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158308354 158364356 + MGP_NODShiLtJ_P0087301 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0087302.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158308354 158366371 + MGP_NODShiLtJ_P0087302 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0087303.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158343616 158364271 + MGP_NODShiLtJ_P0087303 Brsk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087304.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158346928 158364271 + MGP_NODShiLtJ_P0087304 Brsk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087305.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158346968 158365295 + MGP_NODShiLtJ_P0087305 Brsk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087306.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158347789 158364271 + MGP_NODShiLtJ_P0087306 Brsk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087307.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158355233 158364274 + MGP_NODShiLtJ_P0087307 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0087308.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158355289 158364600 + MGP_NODShiLtJ_P0087308 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0087309.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158359549 158366191 + Brsk2 protein_coding processed_transcript MGP_NODShiLtJ_T0087310.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158359577 158364799 + Brsk2 protein_coding processed_transcript MGP_NODShiLtJ_T0087311.1 MGP_NODShiLtJ_G0033051.1 mouse_genomes_project 7 158360740 158363521 + MGP_NODShiLtJ_P0087311 Brsk2 protein_coding protein_coding MGP_NODShiLtJ_T0008884.1 MGP_NODShiLtJ_G0007157.1 mouse_genomes_project 7 103446279 103450188 + Gm26981 lincRNA lincRNA MGP_NODShiLtJ_T0082351.1 MGP_NODShiLtJ_G0031784.1 mouse_genomes_project 7 29494169 29517218 + MGP_NODShiLtJ_P0082351 Map4k1 protein_coding protein_coding MGP_NODShiLtJ_T0082352.1 MGP_NODShiLtJ_G0031784.1 mouse_genomes_project 7 29494271 29517213 + MGP_NODShiLtJ_P0082352 Map4k1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082339.1 MGP_NODShiLtJ_G0031781.1 mouse_genomes_project 7 29384204 29397736 + MGP_NODShiLtJ_P0082339 Capn12 protein_coding protein_coding MGP_NODShiLtJ_T0087387.1 MGP_NODShiLtJ_G0033067.1 mouse_genomes_project 7 159000062 159007695 + Mrpl23 protein_coding processed_transcript MGP_NODShiLtJ_T0087388.1 MGP_NODShiLtJ_G0033067.1 mouse_genomes_project 7 159000275 159007705 + MGP_NODShiLtJ_P0087388 Mrpl23 protein_coding protein_coding MGP_NODShiLtJ_T0087389.1 MGP_NODShiLtJ_G0033067.1 mouse_genomes_project 7 159001788 159004247 + Mrpl23 protein_coding retained_intron MGP_NODShiLtJ_T0087390.1 MGP_NODShiLtJ_G0033067.1 mouse_genomes_project 7 159003370 159004868 + Mrpl23 protein_coding retained_intron MGP_NODShiLtJ_T0081661.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19010477 19036952 - Relb protein_coding retained_intron MGP_NODShiLtJ_T0081662.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19010477 19036952 - Relb protein_coding retained_intron MGP_NODShiLtJ_T0081663.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19010477 19036952 - Relb protein_coding retained_intron MGP_NODShiLtJ_T0081664.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19010477 19036952 - MGP_NODShiLtJ_P0081664 Relb protein_coding protein_coding MGP_NODShiLtJ_T0081665.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19010477 19036952 - MGP_NODShiLtJ_P0081665 Relb protein_coding protein_coding MGP_NODShiLtJ_T0081666.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19010483 19036952 - MGP_NODShiLtJ_P0081666 Relb protein_coding protein_coding MGP_NODShiLtJ_T0081667.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19021706 19036298 - Relb protein_coding processed_transcript MGP_NODShiLtJ_T0081668.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19023101 19035987 - Relb protein_coding processed_transcript MGP_NODShiLtJ_T0081669.1 MGP_NODShiLtJ_G0031595.1 mouse_genomes_project 7 19023165 19035948 - Relb protein_coding processed_transcript MGP_NODShiLtJ_T0002237.1 MGP_NODShiLtJ_G0002148.1 mouse_genomes_project 7 88819599 88820158 - TEC TEC MGP_NODShiLtJ_T0085201.1 MGP_NODShiLtJ_G0032520.1 mouse_genomes_project 7 117085725 117116828 - MGP_NODShiLtJ_P0085201 Trim30d protein_coding protein_coding MGP_NODShiLtJ_T0085202.1 MGP_NODShiLtJ_G0032520.1 mouse_genomes_project 7 117087937 117098390 - MGP_NODShiLtJ_P0085202 Trim30d protein_coding protein_coding MGP_NODShiLtJ_T0082080.1 MGP_NODShiLtJ_G0031716.1 mouse_genomes_project 7 27448060 27458221 + MGP_NODShiLtJ_P0082080 BC024978 protein_coding protein_coding MGP_NODShiLtJ_T0082081.1 MGP_NODShiLtJ_G0031716.1 mouse_genomes_project 7 27456532 27458221 + MGP_NODShiLtJ_P0082081 BC024978 protein_coding protein_coding MGP_NODShiLtJ_T0008910.1 MGP_NODShiLtJ_G0007175.1 mouse_genomes_project 7 129115375 129122844 - Gm45020 lincRNA lincRNA MGP_NODShiLtJ_T0081114.1 MGP_NODShiLtJ_G0031396.1 mouse_genomes_project 7 2312801 2321239 - MGP_NODShiLtJ_P0081114 Rfpl4 protein_coding protein_coding MGP_NODShiLtJ_T0081115.1 MGP_NODShiLtJ_G0031396.1 mouse_genomes_project 7 2312801 2321239 - MGP_NODShiLtJ_P0081115 Rfpl4 protein_coding protein_coding MGP_NODShiLtJ_T0086793.1 MGP_NODShiLtJ_G0032923.1 mouse_genomes_project 7 148524767 148550569 - MGP_NODShiLtJ_P0086793 Mettl10 protein_coding protein_coding MGP_NODShiLtJ_T0086794.1 MGP_NODShiLtJ_G0032923.1 mouse_genomes_project 7 148524919 148550512 - MGP_NODShiLtJ_P0086794 Mettl10 protein_coding protein_coding MGP_NODShiLtJ_T0086795.1 MGP_NODShiLtJ_G0032923.1 mouse_genomes_project 7 148525091 148550275 - Mettl10 protein_coding processed_transcript MGP_NODShiLtJ_T0086796.1 MGP_NODShiLtJ_G0032923.1 mouse_genomes_project 7 148528670 148550511 - MGP_NODShiLtJ_P0086796 Mettl10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086797.1 MGP_NODShiLtJ_G0032923.1 mouse_genomes_project 7 148528678 148550481 - MGP_NODShiLtJ_P0086797 Mettl10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086798.1 MGP_NODShiLtJ_G0032923.1 mouse_genomes_project 7 148548001 148550535 - Mettl10 protein_coding processed_transcript MGP_NODShiLtJ_T0082202.1 MGP_NODShiLtJ_G0031744.1 mouse_genomes_project 7 28449368 28509179 + MGP_NODShiLtJ_P0082202 Fcgbp protein_coding protein_coding MGP_NODShiLtJ_T0082203.1 MGP_NODShiLtJ_G0031744.1 mouse_genomes_project 7 28449368 28509181 + MGP_NODShiLtJ_P0082203 Fcgbp protein_coding protein_coding MGP_NODShiLtJ_T0082204.1 MGP_NODShiLtJ_G0031744.1 mouse_genomes_project 7 28449710 28468653 + Fcgbp protein_coding retained_intron MGP_NODShiLtJ_T0082206.1 MGP_NODShiLtJ_G0031744.1 mouse_genomes_project 7 28482459 28509179 + Fcgbp protein_coding retained_intron MGP_NODShiLtJ_T0082207.1 MGP_NODShiLtJ_G0031744.1 mouse_genomes_project 7 28494979 28509180 + Fcgbp protein_coding retained_intron MGP_NODShiLtJ_T0082208.1 MGP_NODShiLtJ_G0031744.1 mouse_genomes_project 7 28496766 28509180 + Fcgbp protein_coding processed_transcript MGP_NODShiLtJ_T0002175.1 MGP_NODShiLtJ_G0002087.1 mouse_genomes_project 7 45645643 45645768 + TEC TEC MGP_NODShiLtJ_T0084060.1 MGP_NODShiLtJ_G0032187.1 mouse_genomes_project 7 81137045 81175161 + MGP_NODShiLtJ_P0084060 Fam174b protein_coding protein_coding MGP_NODShiLtJ_T0084061.1 MGP_NODShiLtJ_G0032187.1 mouse_genomes_project 7 81163649 81173399 + MGP_NODShiLtJ_P0084061 Fam174b protein_coding protein_coding MGP_NODShiLtJ_T0084062.1 MGP_NODShiLtJ_G0032187.1 mouse_genomes_project 7 81163713 81174260 + Fam174b protein_coding retained_intron MGP_NODShiLtJ_T0015564.1 MGP_NODShiLtJ_G0013672.1 mouse_genomes_project 7 1744342 1746576 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081529.1 MGP_NODShiLtJ_G0031558.1 mouse_genomes_project 7 18320840 18322403 + MGP_NODShiLtJ_P0081529 Nanos2 protein_coding protein_coding MGP_NODShiLtJ_T0011586.1 MGP_NODShiLtJ_G0009719.1 mouse_genomes_project 7 146007902 146007978 - Gm27884 misc_RNA misc_RNA MGP_NODShiLtJ_T0084502.1 MGP_NODShiLtJ_G0032276.1 mouse_genomes_project 7 93534323 93540617 + MGP_NODShiLtJ_P0084502 protein_coding protein_coding MGP_NODShiLtJ_T0085614.1 MGP_NODShiLtJ_G0032690.1 mouse_genomes_project 7 128491472 128643174 + MGP_NODShiLtJ_P0085614 Pde3b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085615.1 MGP_NODShiLtJ_G0032690.1 mouse_genomes_project 7 128604644 128606932 + Pde3b protein_coding retained_intron MGP_NODShiLtJ_T0085616.1 MGP_NODShiLtJ_G0032690.1 mouse_genomes_project 7 128621959 128633596 + Pde3b protein_coding retained_intron MGP_NODShiLtJ_T0101191.1 MGP_NODShiLtJ_G0039502.1 mouse_genomes_project 7 41095699 41096038 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101192.1 MGP_NODShiLtJ_G0039502.1 mouse_genomes_project 7 41095972 41099150 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0085101.1 MGP_NODShiLtJ_G0032444.1 mouse_genomes_project 7 115138372 115139413 + MGP_NODShiLtJ_P0085101 Olfr574 protein_coding protein_coding MGP_NODShiLtJ_T0084517.1 MGP_NODShiLtJ_G0032290.1 mouse_genomes_project 7 96162115 96163123 - MGP_NODShiLtJ_P0084517 Olfr294 protein_coding protein_coding MGP_NODShiLtJ_T0097826.1 MGP_NODShiLtJ_G0036238.1 mouse_genomes_project 7 90336706 90337320 + pseudogene pseudogene MGP_NODShiLtJ_T0085298.1 MGP_NODShiLtJ_G0032567.1 mouse_genomes_project 7 118613778 118633367 + Dnhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0085304.1 MGP_NODShiLtJ_G0032567.1 mouse_genomes_project 7 118613795 118664313 + Dnhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0085307.1 MGP_NODShiLtJ_G0032567.1 mouse_genomes_project 7 118625144 118701627 + MGP_NODShiLtJ_P0085307 Dnhd1 protein_coding protein_coding MGP_NODShiLtJ_T0085308.1 MGP_NODShiLtJ_G0032567.1 mouse_genomes_project 7 118625525 118701595 + MGP_NODShiLtJ_P0085308 Dnhd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085309.1 MGP_NODShiLtJ_G0032567.1 mouse_genomes_project 7 118653863 118658120 + Dnhd1 protein_coding retained_intron MGP_NODShiLtJ_T0085310.1 MGP_NODShiLtJ_G0032567.1 mouse_genomes_project 7 118657943 118664306 + MGP_NODShiLtJ_P0085310 Dnhd1 protein_coding protein_coding MGP_NODShiLtJ_T0085076.1 MGP_NODShiLtJ_G0032421.1 mouse_genomes_project 7 114649778 114650723 + MGP_NODShiLtJ_P0085076 Olfr547 protein_coding protein_coding MGP_NODShiLtJ_T0081423.1 MGP_NODShiLtJ_G0031523.1 mouse_genomes_project 7 15694359 15711328 + MGP_NODShiLtJ_P0081423 Slc1a5 protein_coding protein_coding MGP_NODShiLtJ_T0081424.1 MGP_NODShiLtJ_G0031523.1 mouse_genomes_project 7 15694387 15711328 + Slc1a5 protein_coding retained_intron MGP_NODShiLtJ_T0081425.1 MGP_NODShiLtJ_G0031523.1 mouse_genomes_project 7 15695416 15700175 + Slc1a5 protein_coding retained_intron MGP_NODShiLtJ_T0081426.1 MGP_NODShiLtJ_G0031523.1 mouse_genomes_project 7 15697755 15706723 + Slc1a5 protein_coding processed_transcript MGP_NODShiLtJ_T0081427.1 MGP_NODShiLtJ_G0031523.1 mouse_genomes_project 7 15698679 15700175 + Slc1a5 protein_coding retained_intron MGP_NODShiLtJ_T0081428.1 MGP_NODShiLtJ_G0031523.1 mouse_genomes_project 7 15699390 15706813 + Slc1a5 protein_coding retained_intron MGP_NODShiLtJ_T0081429.1 MGP_NODShiLtJ_G0031523.1 mouse_genomes_project 7 15706044 15709197 + Slc1a5 protein_coding processed_transcript MGP_NODShiLtJ_T0081430.1 MGP_NODShiLtJ_G0031523.1 mouse_genomes_project 7 15706194 15708961 + Slc1a5 protein_coding retained_intron MGP_NODShiLtJ_T0085236.1 MGP_NODShiLtJ_G0032552.1 mouse_genomes_project 7 118258260 118259336 + MGP_NODShiLtJ_P0085236 protein_coding protein_coding MGP_NODShiLtJ_T0085109.1 MGP_NODShiLtJ_G0032451.1 mouse_genomes_project 7 115241281 115242339 + MGP_NODShiLtJ_P0085109 protein_coding protein_coding MGP_NODShiLtJ_T0084608.1 MGP_NODShiLtJ_G0032320.1 mouse_genomes_project 7 103244798 103248369 + Ccdc90b protein_coding processed_transcript MGP_NODShiLtJ_T0084609.1 MGP_NODShiLtJ_G0032320.1 mouse_genomes_project 7 103244798 103274006 + MGP_NODShiLtJ_P0084609 Ccdc90b protein_coding protein_coding MGP_NODShiLtJ_T0084610.1 MGP_NODShiLtJ_G0032320.1 mouse_genomes_project 7 103244798 103274006 + MGP_NODShiLtJ_P0084610 Ccdc90b protein_coding protein_coding MGP_NODShiLtJ_T0008738.1 MGP_NODShiLtJ_G0007052.1 mouse_genomes_project 7 24998684 25002853 + D930028M14Rik lincRNA lincRNA MGP_NODShiLtJ_T0008739.1 MGP_NODShiLtJ_G0007052.1 mouse_genomes_project 7 25001294 25002445 + D930028M14Rik lincRNA lincRNA MGP_NODShiLtJ_T0082567.1 MGP_NODShiLtJ_G0031836.1 mouse_genomes_project 7 31106459 31109132 + MGP_NODShiLtJ_P0082567 Nphs1 protein_coding protein_coding MGP_NODShiLtJ_T0082568.1 MGP_NODShiLtJ_G0031836.1 mouse_genomes_project 7 31107852 31136204 + MGP_NODShiLtJ_P0082568 Nphs1 protein_coding protein_coding MGP_NODShiLtJ_T0082569.1 MGP_NODShiLtJ_G0031836.1 mouse_genomes_project 7 31122722 31131799 + Nphs1 protein_coding retained_intron MGP_NODShiLtJ_T0082570.1 MGP_NODShiLtJ_G0031836.1 mouse_genomes_project 7 31126691 31135862 + MGP_NODShiLtJ_P0082570 Nphs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082571.1 MGP_NODShiLtJ_G0031836.1 mouse_genomes_project 7 31135235 31135969 + Nphs1 protein_coding retained_intron MGP_NODShiLtJ_T0084946.1 MGP_NODShiLtJ_G0032393.1 mouse_genomes_project 7 113435681 113531654 + MGP_NODShiLtJ_P0084946 protein_coding protein_coding MGP_NODShiLtJ_T0084947.1 MGP_NODShiLtJ_G0032393.1 mouse_genomes_project 7 113435681 113531654 + MGP_NODShiLtJ_P0084947 protein_coding protein_coding MGP_NODShiLtJ_T0084948.1 MGP_NODShiLtJ_G0032393.1 mouse_genomes_project 7 113435699 113531639 + MGP_NODShiLtJ_P0084948 protein_coding protein_coding MGP_NODShiLtJ_T0099491.1 MGP_NODShiLtJ_G0037885.1 mouse_genomes_project 7 68168003 68168110 - Gm23431 snRNA snRNA MGP_NODShiLtJ_T0100743.1 MGP_NODShiLtJ_G0039137.1 mouse_genomes_project 7 63361516 63361648 - Gm26288 snoRNA snoRNA MGP_NODShiLtJ_T0082793.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31851116 31867450 - MGP_NODShiLtJ_P0082793 Hpn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082794.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31851116 31863202 - MGP_NODShiLtJ_P0082794 Hpn protein_coding protein_coding MGP_NODShiLtJ_T0082795.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31851116 31867465 - MGP_NODShiLtJ_P0082795 Hpn protein_coding protein_coding MGP_NODShiLtJ_T0082796.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31851116 31867457 - MGP_NODShiLtJ_P0082796 Hpn protein_coding protein_coding MGP_NODShiLtJ_T0082797.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31851120 31854898 - MGP_NODShiLtJ_P0082797 Hpn protein_coding protein_coding MGP_NODShiLtJ_T0082798.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31851124 31851677 - MGP_NODShiLtJ_P0082798 Hpn protein_coding protein_coding MGP_NODShiLtJ_T0082799.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31851629 31852675 - Hpn protein_coding retained_intron MGP_NODShiLtJ_T0082800.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31854576 31855590 - Hpn protein_coding retained_intron MGP_NODShiLtJ_T0082801.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31854881 31855863 - Hpn protein_coding retained_intron MGP_NODShiLtJ_T0082802.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31861315 31864163 - MGP_NODShiLtJ_P0082802 Hpn protein_coding protein_coding MGP_NODShiLtJ_T0082803.1 MGP_NODShiLtJ_G0031875.1 mouse_genomes_project 7 31862770 31863214 - Hpn protein_coding retained_intron MGP_NODShiLtJ_T0082141.1 MGP_NODShiLtJ_G0031730.1 mouse_genomes_project 7 27822822 27847634 - MGP_NODShiLtJ_P0082141 Pld3 protein_coding protein_coding MGP_NODShiLtJ_T0082142.1 MGP_NODShiLtJ_G0031730.1 mouse_genomes_project 7 27822822 27847628 - MGP_NODShiLtJ_P0082142 Pld3 protein_coding protein_coding MGP_NODShiLtJ_T0082143.1 MGP_NODShiLtJ_G0031730.1 mouse_genomes_project 7 27823017 27823569 - Pld3 protein_coding retained_intron MGP_NODShiLtJ_T0082144.1 MGP_NODShiLtJ_G0031730.1 mouse_genomes_project 7 27824276 27829671 - Pld3 protein_coding retained_intron MGP_NODShiLtJ_T0082145.1 MGP_NODShiLtJ_G0031730.1 mouse_genomes_project 7 27831381 27847432 - MGP_NODShiLtJ_P0082145 Pld3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082146.1 MGP_NODShiLtJ_G0031730.1 mouse_genomes_project 7 27832947 27847600 - MGP_NODShiLtJ_P0082146 Pld3 protein_coding protein_coding MGP_NODShiLtJ_T0082147.1 MGP_NODShiLtJ_G0031730.1 mouse_genomes_project 7 27833482 27834484 - MGP_NODShiLtJ_P0082147 Pld3 protein_coding protein_coding MGP_NODShiLtJ_T0082148.1 MGP_NODShiLtJ_G0031730.1 mouse_genomes_project 7 27834554 27847567 - Pld3 protein_coding processed_transcript MGP_NODShiLtJ_T0005263.1 MGP_NODShiLtJ_G0004458.1 mouse_genomes_project 7 161178744 161193770 + Faddos antisense antisense MGP_NODShiLtJ_T0102167.1 MGP_NODShiLtJ_G0040333.1 mouse_genomes_project 7 93688683 93688903 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083055.1 MGP_NODShiLtJ_G0031934.1 mouse_genomes_project 7 44295639 44396001 + MGP_NODShiLtJ_P0083055 Vmn2r60 protein_coding protein_coding MGP_NODShiLtJ_T0085274.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118577659 118606747 - MGP_NODShiLtJ_P0085274 Trim3 protein_coding protein_coding MGP_NODShiLtJ_T0085275.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118583714 118606799 - MGP_NODShiLtJ_P0085275 Trim3 protein_coding protein_coding MGP_NODShiLtJ_T0085276.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118583892 118606776 - MGP_NODShiLtJ_P0085276 Trim3 protein_coding protein_coding MGP_NODShiLtJ_T0085277.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118584383 118585101 - Trim3 protein_coding retained_intron MGP_NODShiLtJ_T0085278.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118585552 118586651 - Trim3 protein_coding retained_intron MGP_NODShiLtJ_T0085279.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118590273 118591269 - Trim3 protein_coding retained_intron MGP_NODShiLtJ_T0085280.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118592026 118606764 - MGP_NODShiLtJ_P0085280 Trim3 protein_coding protein_coding MGP_NODShiLtJ_T0085281.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118592348 118606810 - Trim3 protein_coding processed_transcript MGP_NODShiLtJ_T0085282.1 MGP_NODShiLtJ_G0032564.1 mouse_genomes_project 7 118592625 118606724 - MGP_NODShiLtJ_P0085282 Trim3 protein_coding protein_coding MGP_NODShiLtJ_T0086884.1 MGP_NODShiLtJ_G0032942.1 mouse_genomes_project 7 151440968 151604676 + MGP_NODShiLtJ_P0086884 Ptpre protein_coding protein_coding MGP_NODShiLtJ_T0083634.1 MGP_NODShiLtJ_G0032085.1 mouse_genomes_project 7 49634535 49638214 - MGP_NODShiLtJ_P0083634 Saa3 protein_coding protein_coding MGP_NODShiLtJ_T0015706.1 MGP_NODShiLtJ_G0013814.1 mouse_genomes_project 7 62134045 62135445 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015685.1 MGP_NODShiLtJ_G0013793.1 mouse_genomes_project 7 46933663 46934265 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102192.1 MGP_NODShiLtJ_G0040358.1 mouse_genomes_project 7 115131584 115132477 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085086.1 MGP_NODShiLtJ_G0032430.1 mouse_genomes_project 7 114825848 114826871 + MGP_NODShiLtJ_P0085086 Olfr556 protein_coding protein_coding MGP_NODShiLtJ_T0015711.1 MGP_NODShiLtJ_G0013819.1 mouse_genomes_project 7 71894449 71894768 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086781.1 MGP_NODShiLtJ_G0032921.1 mouse_genomes_project 7 148300624 148323127 + Lhpp protein_coding processed_transcript MGP_NODShiLtJ_T0086782.1 MGP_NODShiLtJ_G0032921.1 mouse_genomes_project 7 148300625 148401434 + MGP_NODShiLtJ_P0086782 Lhpp protein_coding protein_coding MGP_NODShiLtJ_T0086783.1 MGP_NODShiLtJ_G0032921.1 mouse_genomes_project 7 148300653 148363166 + Lhpp protein_coding processed_transcript MGP_NODShiLtJ_T0086784.1 MGP_NODShiLtJ_G0032921.1 mouse_genomes_project 7 148300694 148400791 + Lhpp protein_coding processed_transcript MGP_NODShiLtJ_T0086785.1 MGP_NODShiLtJ_G0032921.1 mouse_genomes_project 7 148322871 148334068 + Lhpp protein_coding retained_intron MGP_NODShiLtJ_T0087015.1 MGP_NODShiLtJ_G0032975.1 mouse_genomes_project 7 156325488 156326564 - MGP_NODShiLtJ_P0087015 Olfr522 protein_coding protein_coding MGP_NODShiLtJ_T0008868.1 MGP_NODShiLtJ_G0007150.1 mouse_genomes_project 7 89826688 89832725 + 2900076A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008869.1 MGP_NODShiLtJ_G0007150.1 mouse_genomes_project 7 89826701 89833317 + 2900076A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008870.1 MGP_NODShiLtJ_G0007150.1 mouse_genomes_project 7 89826709 89834659 + 2900076A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008871.1 MGP_NODShiLtJ_G0007150.1 mouse_genomes_project 7 89826709 89832609 + 2900076A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008872.1 MGP_NODShiLtJ_G0007150.1 mouse_genomes_project 7 89826744 89832411 + 2900076A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008873.1 MGP_NODShiLtJ_G0007150.1 mouse_genomes_project 7 89831569 89832682 + 2900076A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008874.1 MGP_NODShiLtJ_G0007150.1 mouse_genomes_project 7 89831946 89832761 + 2900076A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008875.1 MGP_NODShiLtJ_G0007150.1 mouse_genomes_project 7 89831961 89834663 + 2900076A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0084684.1 MGP_NODShiLtJ_G0032336.1 mouse_genomes_project 7 109237338 109240430 + Rsf1 protein_coding retained_intron MGP_NODShiLtJ_T0084685.1 MGP_NODShiLtJ_G0032336.1 mouse_genomes_project 7 109237346 109362964 + Rsf1 protein_coding retained_intron MGP_NODShiLtJ_T0084686.1 MGP_NODShiLtJ_G0032336.1 mouse_genomes_project 7 109237346 109369304 + MGP_NODShiLtJ_P0084686 Rsf1 protein_coding protein_coding MGP_NODShiLtJ_T0084687.1 MGP_NODShiLtJ_G0032336.1 mouse_genomes_project 7 109237356 109300775 + MGP_NODShiLtJ_P0084687 Rsf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084688.1 MGP_NODShiLtJ_G0032336.1 mouse_genomes_project 7 109319724 109323411 + Rsf1 protein_coding retained_intron MGP_NODShiLtJ_T0084689.1 MGP_NODShiLtJ_G0032336.1 mouse_genomes_project 7 109325048 109363152 + MGP_NODShiLtJ_P0084689 Rsf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084690.1 MGP_NODShiLtJ_G0032336.1 mouse_genomes_project 7 109332901 109351995 + Rsf1 protein_coding retained_intron MGP_NODShiLtJ_T0084691.1 MGP_NODShiLtJ_G0032336.1 mouse_genomes_project 7 109333256 109357339 + MGP_NODShiLtJ_P0084691 Rsf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005114.1 MGP_NODShiLtJ_G0004352.1 mouse_genomes_project 7 25257105 25328121 + antisense antisense MGP_NODShiLtJ_T0005115.1 MGP_NODShiLtJ_G0004352.1 mouse_genomes_project 7 25257109 25266076 + antisense antisense MGP_NODShiLtJ_T0005116.1 MGP_NODShiLtJ_G0004352.1 mouse_genomes_project 7 25265102 25265913 + antisense antisense MGP_NODShiLtJ_T0005117.1 MGP_NODShiLtJ_G0004352.1 mouse_genomes_project 7 25275752 25464979 + antisense antisense MGP_NODShiLtJ_T0085701.1 MGP_NODShiLtJ_G0032703.1 mouse_genomes_project 7 132556186 132567374 - MGP_NODShiLtJ_P0085701 Arl6ip1 protein_coding protein_coding MGP_NODShiLtJ_T0085702.1 MGP_NODShiLtJ_G0032703.1 mouse_genomes_project 7 132557547 132566822 - Arl6ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0085703.1 MGP_NODShiLtJ_G0032703.1 mouse_genomes_project 7 132557595 132567288 - MGP_NODShiLtJ_P0085703 Arl6ip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085704.1 MGP_NODShiLtJ_G0032703.1 mouse_genomes_project 7 132558495 132567286 - MGP_NODShiLtJ_P0085704 Arl6ip1 protein_coding protein_coding MGP_NODShiLtJ_T0085705.1 MGP_NODShiLtJ_G0032703.1 mouse_genomes_project 7 132558522 132567272 - MGP_NODShiLtJ_P0085705 Arl6ip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085706.1 MGP_NODShiLtJ_G0032703.1 mouse_genomes_project 7 132564011 132567284 - Arl6ip1 protein_coding retained_intron MGP_NODShiLtJ_T0081098.1 MGP_NODShiLtJ_G0031387.1 mouse_genomes_project 7 2213484 2226337 + MGP_NODShiLtJ_P0081098 Zfp865 protein_coding protein_coding MGP_NODShiLtJ_T0085219.1 MGP_NODShiLtJ_G0032535.1 mouse_genomes_project 7 117603091 117604072 - MGP_NODShiLtJ_P0085219 Olfr667 protein_coding protein_coding MGP_NODShiLtJ_T0002166.1 MGP_NODShiLtJ_G0002078.1 mouse_genomes_project 7 38082350 38083892 + TEC TEC MGP_NODShiLtJ_T0082157.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27899520 27953825 + MGP_NODShiLtJ_P0082157 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082158.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27899576 27952449 + MGP_NODShiLtJ_P0082158 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082159.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27900198 27937322 + MGP_NODShiLtJ_P0082159 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082160.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27900288 27943142 + MGP_NODShiLtJ_P0082160 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082161.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27901376 27924828 + Akt2 protein_coding processed_transcript MGP_NODShiLtJ_T0082162.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27904656 27926715 + MGP_NODShiLtJ_P0082162 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082163.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27913602 27937346 + MGP_NODShiLtJ_P0082163 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082164.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27913622 27952447 + MGP_NODShiLtJ_P0082164 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082165.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27913663 27952452 + MGP_NODShiLtJ_P0082165 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082166.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27915553 27943122 + MGP_NODShiLtJ_P0082166 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082167.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27915809 27926768 + MGP_NODShiLtJ_P0082167 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082168.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27916467 27949398 + MGP_NODShiLtJ_P0082168 Akt2 protein_coding protein_coding MGP_NODShiLtJ_T0082169.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27937001 27944465 + Akt2 protein_coding retained_intron MGP_NODShiLtJ_T0082170.1 MGP_NODShiLtJ_G0031732.1 mouse_genomes_project 7 27947280 27948671 + Akt2 protein_coding retained_intron MGP_NODShiLtJ_T0087026.1 MGP_NODShiLtJ_G0032984.1 mouse_genomes_project 7 156595684 156596599 - MGP_NODShiLtJ_P0087026 Olfr531 protein_coding protein_coding MGP_NODShiLtJ_T0005119.1 MGP_NODShiLtJ_G0004354.1 mouse_genomes_project 7 27364917 27371132 - Gm15883 antisense antisense MGP_NODShiLtJ_T0015716.1 MGP_NODShiLtJ_G0013824.1 mouse_genomes_project 7 77543286 77544296 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099528.1 MGP_NODShiLtJ_G0037922.1 mouse_genomes_project 7 154146605 154146712 - Gm25798 snRNA snRNA MGP_NODShiLtJ_T0084396.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89639712 89755254 - MGP_NODShiLtJ_P0084396 Cpeb1 protein_coding protein_coding MGP_NODShiLtJ_T0084397.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89639714 89736396 - MGP_NODShiLtJ_P0084397 Cpeb1 protein_coding protein_coding MGP_NODShiLtJ_T0084398.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89639715 89755254 - MGP_NODShiLtJ_P0084398 Cpeb1 protein_coding protein_coding MGP_NODShiLtJ_T0084399.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89642007 89643197 - Cpeb1 protein_coding retained_intron MGP_NODShiLtJ_T0084400.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89642288 89648682 - Cpeb1 protein_coding processed_transcript MGP_NODShiLtJ_T0084401.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89655225 89666903 - Cpeb1 protein_coding retained_intron MGP_NODShiLtJ_T0084402.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89655225 89755961 - Cpeb1 protein_coding processed_transcript MGP_NODShiLtJ_T0084403.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89655389 89666947 - Cpeb1 protein_coding processed_transcript MGP_NODShiLtJ_T0084404.1 MGP_NODShiLtJ_G0032245.1 mouse_genomes_project 7 89736242 89755888 - Cpeb1 protein_coding processed_transcript MGP_NODShiLtJ_T0082068.1 MGP_NODShiLtJ_G0031713.1 mouse_genomes_project 7 27418918 27431580 - MGP_NODShiLtJ_P0082068 Gm21983 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010807.1 MGP_NODShiLtJ_G0008940.1 mouse_genomes_project 7 123153066 123153186 + miRNA miRNA MGP_NODShiLtJ_T0084065.1 MGP_NODShiLtJ_G0032189.1 mouse_genomes_project 7 81701390 82002842 - MGP_NODShiLtJ_P0084065 Slco3a1 protein_coding protein_coding MGP_NODShiLtJ_T0084066.1 MGP_NODShiLtJ_G0032189.1 mouse_genomes_project 7 81707828 82002823 - MGP_NODShiLtJ_P0084066 Slco3a1 protein_coding protein_coding MGP_NODShiLtJ_T0084067.1 MGP_NODShiLtJ_G0032189.1 mouse_genomes_project 7 81721341 82002989 - MGP_NODShiLtJ_P0084067 Slco3a1 protein_coding protein_coding MGP_NODShiLtJ_T0084068.1 MGP_NODShiLtJ_G0032189.1 mouse_genomes_project 7 81761636 81778581 - Slco3a1 protein_coding retained_intron MGP_NODShiLtJ_T0084069.1 MGP_NODShiLtJ_G0032189.1 mouse_genomes_project 7 81778135 82002683 - MGP_NODShiLtJ_P0084069 Slco3a1 protein_coding protein_coding MGP_NODShiLtJ_T0084070.1 MGP_NODShiLtJ_G0032189.1 mouse_genomes_project 7 81791351 81951769 - Slco3a1 protein_coding retained_intron MGP_NODShiLtJ_T0084071.1 MGP_NODShiLtJ_G0032189.1 mouse_genomes_project 7 81951672 82000803 - MGP_NODShiLtJ_P0084071 Slco3a1 protein_coding protein_coding MGP_NODShiLtJ_T0084072.1 MGP_NODShiLtJ_G0032189.1 mouse_genomes_project 7 81951819 81977929 - Slco3a1 protein_coding processed_transcript MGP_NODShiLtJ_T0099529.1 MGP_NODShiLtJ_G0037923.1 mouse_genomes_project 7 155281898 155281998 - Gm27975 snRNA snRNA MGP_NODShiLtJ_T0085042.1 MGP_NODShiLtJ_G0032413.1 mouse_genomes_project 7 114208316 114305302 - MGP_NODShiLtJ_P0085042 Nup98 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085043.1 MGP_NODShiLtJ_G0032413.1 mouse_genomes_project 7 114223359 114305334 - MGP_NODShiLtJ_P0085043 Nup98 protein_coding protein_coding MGP_NODShiLtJ_T0084641.1 MGP_NODShiLtJ_G0032327.1 mouse_genomes_project 7 108707036 108939897 + MGP_NODShiLtJ_P0084641 Gab2 protein_coding protein_coding MGP_NODShiLtJ_T0084642.1 MGP_NODShiLtJ_G0032327.1 mouse_genomes_project 7 108707246 108935987 + MGP_NODShiLtJ_P0084642 Gab2 protein_coding protein_coding MGP_NODShiLtJ_T0081789.1 MGP_NODShiLtJ_G0031641.1 mouse_genomes_project 7 24127363 24136855 + Smg9 protein_coding retained_intron MGP_NODShiLtJ_T0081790.1 MGP_NODShiLtJ_G0031641.1 mouse_genomes_project 7 24127363 24151376 + MGP_NODShiLtJ_P0081790 Smg9 protein_coding protein_coding MGP_NODShiLtJ_T0081791.1 MGP_NODShiLtJ_G0031641.1 mouse_genomes_project 7 24128243 24134433 + Smg9 protein_coding retained_intron MGP_NODShiLtJ_T0081792.1 MGP_NODShiLtJ_G0031641.1 mouse_genomes_project 7 24128440 24136152 + MGP_NODShiLtJ_P0081792 Smg9 protein_coding protein_coding MGP_NODShiLtJ_T0081793.1 MGP_NODShiLtJ_G0031641.1 mouse_genomes_project 7 24143313 24149529 + Smg9 protein_coding retained_intron MGP_NODShiLtJ_T0081794.1 MGP_NODShiLtJ_G0031641.1 mouse_genomes_project 7 24143555 24149529 + MGP_NODShiLtJ_P0081794 Smg9 protein_coding protein_coding MGP_NODShiLtJ_T0081795.1 MGP_NODShiLtJ_G0031641.1 mouse_genomes_project 7 24148799 24151237 + Smg9 protein_coding retained_intron MGP_NODShiLtJ_T0083746.1 MGP_NODShiLtJ_G0032124.1 mouse_genomes_project 7 55961507 56118807 + MGP_NODShiLtJ_P0083746 Gas2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083747.1 MGP_NODShiLtJ_G0032124.1 mouse_genomes_project 7 55961919 56087581 + MGP_NODShiLtJ_P0083747 Gas2 protein_coding protein_coding MGP_NODShiLtJ_T0083748.1 MGP_NODShiLtJ_G0032124.1 mouse_genomes_project 7 55963409 55963903 + Gas2 protein_coding retained_intron MGP_NODShiLtJ_T0083749.1 MGP_NODShiLtJ_G0032124.1 mouse_genomes_project 7 55978544 56118287 + MGP_NODShiLtJ_P0083749 Gas2 protein_coding protein_coding MGP_NODShiLtJ_T0083750.1 MGP_NODShiLtJ_G0032124.1 mouse_genomes_project 7 55978626 56118292 + MGP_NODShiLtJ_P0083750 Gas2 protein_coding protein_coding MGP_NODShiLtJ_T0083751.1 MGP_NODShiLtJ_G0032124.1 mouse_genomes_project 7 55979907 56058121 + MGP_NODShiLtJ_P0083751 Gas2 protein_coding protein_coding MGP_NODShiLtJ_T0083752.1 MGP_NODShiLtJ_G0032124.1 mouse_genomes_project 7 56033872 56058159 + Gas2 protein_coding processed_transcript MGP_NODShiLtJ_T0083753.1 MGP_NODShiLtJ_G0032124.1 mouse_genomes_project 7 56058075 56078028 + Gas2 protein_coding processed_transcript MGP_NODShiLtJ_T0102053.1 MGP_NODShiLtJ_G0040220.1 mouse_genomes_project 7 184549 185393 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085402.1 MGP_NODShiLtJ_G0032622.1 mouse_genomes_project 7 121752577 121753522 - MGP_NODShiLtJ_P0085402 protein_coding protein_coding MGP_NODShiLtJ_T0084706.1 MGP_NODShiLtJ_G0032340.1 mouse_genomes_project 7 109641726 109777606 + MGP_NODShiLtJ_P0084706 Gdpd4 protein_coding protein_coding MGP_NODShiLtJ_T0084707.1 MGP_NODShiLtJ_G0032340.1 mouse_genomes_project 7 109679332 109776394 + MGP_NODShiLtJ_P0084707 Gdpd4 protein_coding protein_coding MGP_NODShiLtJ_T0086776.1 MGP_NODShiLtJ_G0032918.1 mouse_genomes_project 7 147916020 148000044 - MGP_NODShiLtJ_P0086776 Chst15 protein_coding protein_coding MGP_NODShiLtJ_T0086777.1 MGP_NODShiLtJ_G0032918.1 mouse_genomes_project 7 147916020 147999530 - MGP_NODShiLtJ_P0086777 Chst15 protein_coding protein_coding MGP_NODShiLtJ_T0086778.1 MGP_NODShiLtJ_G0032918.1 mouse_genomes_project 7 147953084 147960803 - Chst15 protein_coding processed_transcript MGP_NODShiLtJ_T0083231.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47201479 47207798 + MGP_NODShiLtJ_P0083231 Fam71e1 protein_coding protein_coding MGP_NODShiLtJ_T0083232.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47201486 47206963 + Fam71e1 protein_coding retained_intron MGP_NODShiLtJ_T0083233.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47201497 47202047 + MGP_NODShiLtJ_P0083233 Fam71e1 protein_coding protein_coding MGP_NODShiLtJ_T0083234.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47201556 47207791 + MGP_NODShiLtJ_P0083234 Fam71e1 protein_coding protein_coding MGP_NODShiLtJ_T0083235.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47201566 47207791 + MGP_NODShiLtJ_P0083235 Fam71e1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083236.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47201570 47208144 + Fam71e1 protein_coding retained_intron MGP_NODShiLtJ_T0083237.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47201570 47202900 + Fam71e1 protein_coding retained_intron MGP_NODShiLtJ_T0083238.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47201592 47206992 + Fam71e1 protein_coding retained_intron MGP_NODShiLtJ_T0083239.1 MGP_NODShiLtJ_G0031982.1 mouse_genomes_project 7 47207047 47207790 + Fam71e1 protein_coding processed_transcript MGP_NODShiLtJ_T0086360.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142403850 142406054 - Sept1 protein_coding retained_intron MGP_NODShiLtJ_T0086361.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142405523 142409279 - MGP_NODShiLtJ_P0086361 Sept1 protein_coding protein_coding MGP_NODShiLtJ_T0086362.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142405699 142409341 - MGP_NODShiLtJ_P0086362 Sept1 protein_coding protein_coding MGP_NODShiLtJ_T0086363.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142405894 142407909 - Sept1 protein_coding retained_intron MGP_NODShiLtJ_T0086364.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142406813 142409260 - MGP_NODShiLtJ_P0086364 Sept1 protein_coding protein_coding MGP_NODShiLtJ_T0086365.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142407597 142424922 - MGP_NODShiLtJ_P0086365 Sept1 protein_coding protein_coding MGP_NODShiLtJ_T0086366.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142407634 142409296 - Sept1 protein_coding retained_intron MGP_NODShiLtJ_T0086367.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142407841 142409101 - Sept1 protein_coding processed_transcript MGP_NODShiLtJ_T0086368.1 MGP_NODShiLtJ_G0032834.1 mouse_genomes_project 7 142424693 142425406 - Sept1 protein_coding retained_intron MGP_NODShiLtJ_T0085085.1 MGP_NODShiLtJ_G0032429.1 mouse_genomes_project 7 114815290 114816238 + MGP_NODShiLtJ_P0085085 Olfr555 protein_coding protein_coding MGP_NODShiLtJ_T0008833.1 MGP_NODShiLtJ_G0007127.1 mouse_genomes_project 7 80529025 80529405 - Gm28746 lincRNA lincRNA MGP_NODShiLtJ_T0082227.1 MGP_NODShiLtJ_G0031753.1 mouse_genomes_project 7 28715441 28721998 - MGP_NODShiLtJ_P0082227 Timm50 protein_coding protein_coding MGP_NODShiLtJ_T0082228.1 MGP_NODShiLtJ_G0031753.1 mouse_genomes_project 7 28715749 28716590 - Timm50 protein_coding retained_intron MGP_NODShiLtJ_T0082229.1 MGP_NODShiLtJ_G0031753.1 mouse_genomes_project 7 28716353 28717944 - Timm50 protein_coding retained_intron MGP_NODShiLtJ_T0082230.1 MGP_NODShiLtJ_G0031753.1 mouse_genomes_project 7 28719431 28721963 - Timm50 protein_coding retained_intron MGP_NODShiLtJ_T0082231.1 MGP_NODShiLtJ_G0031753.1 mouse_genomes_project 7 28720142 28721982 - Timm50 protein_coding retained_intron MGP_NODShiLtJ_T0082232.1 MGP_NODShiLtJ_G0031753.1 mouse_genomes_project 7 28720839 28721865 - Timm50 protein_coding processed_transcript MGP_NODShiLtJ_T0102088.1 MGP_NODShiLtJ_G0040255.1 mouse_genomes_project 7 13143926 13144368 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081319.1 MGP_NODShiLtJ_G0031486.1 mouse_genomes_project 7 12316880 12446769 - MGP_NODShiLtJ_P0081319 protein_coding protein_coding MGP_NODShiLtJ_T0083541.1 MGP_NODShiLtJ_G0032062.1 mouse_genomes_project 7 48576958 48577665 - MGP_NODShiLtJ_P0083541 Spaca4 protein_coding protein_coding MGP_NODShiLtJ_T0086985.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156253279 156258903 - MGP_NODShiLtJ_P0086985 Fuom protein_coding protein_coding MGP_NODShiLtJ_T0086986.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156255020 156258906 - MGP_NODShiLtJ_P0086986 Fuom protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086987.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156255979 156258876 - MGP_NODShiLtJ_P0086987 Fuom protein_coding protein_coding MGP_NODShiLtJ_T0086988.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156255979 156258941 - MGP_NODShiLtJ_P0086988 Fuom protein_coding protein_coding MGP_NODShiLtJ_T0086989.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156255981 156256478 - Fuom protein_coding retained_intron MGP_NODShiLtJ_T0086990.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156255983 156258820 - Fuom protein_coding processed_transcript MGP_NODShiLtJ_T0086991.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156256003 156257754 - Fuom protein_coding retained_intron MGP_NODShiLtJ_T0086992.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156256398 156258844 - MGP_NODShiLtJ_P0086992 Fuom protein_coding protein_coding MGP_NODShiLtJ_T0086993.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156257066 156258906 - MGP_NODShiLtJ_P0086993 Fuom protein_coding protein_coding MGP_NODShiLtJ_T0086994.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156257612 156258806 - Fuom protein_coding processed_transcript MGP_NODShiLtJ_T0086995.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156257664 156258466 - Fuom protein_coding processed_transcript MGP_NODShiLtJ_T0086996.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156257673 156258906 - Fuom protein_coding retained_intron MGP_NODShiLtJ_T0086997.1 MGP_NODShiLtJ_G0032970.1 mouse_genomes_project 7 156257788 156258830 - Fuom protein_coding retained_intron MGP_NODShiLtJ_T0085360.1 MGP_NODShiLtJ_G0032587.1 mouse_genomes_project 7 120107887 120108838 - MGP_NODShiLtJ_P0085360 protein_coding protein_coding MGP_NODShiLtJ_T0102129.1 MGP_NODShiLtJ_G0040295.1 mouse_genomes_project 7 44696243 44696378 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005218.1 MGP_NODShiLtJ_G0004425.1 mouse_genomes_project 7 130635584 130636466 + Gm44777 antisense antisense MGP_NODShiLtJ_T0005219.1 MGP_NODShiLtJ_G0004425.1 mouse_genomes_project 7 130635591 130640301 + Gm44777 antisense antisense MGP_NODShiLtJ_T0005220.1 MGP_NODShiLtJ_G0004425.1 mouse_genomes_project 7 130637333 130640621 + Gm44777 antisense antisense MGP_NODShiLtJ_T0087498.1 MGP_NODShiLtJ_G0033091.1 mouse_genomes_project 7 160435194 160441112 + Gm498 protein_coding processed_transcript MGP_NODShiLtJ_T0087499.1 MGP_NODShiLtJ_G0033091.1 mouse_genomes_project 7 160437492 160468916 + MGP_NODShiLtJ_P0087499 Gm498 protein_coding protein_coding MGP_NODShiLtJ_T0087500.1 MGP_NODShiLtJ_G0033091.1 mouse_genomes_project 7 160437498 160469916 + MGP_NODShiLtJ_P0087500 Gm498 protein_coding protein_coding MGP_NODShiLtJ_T0100774.1 MGP_NODShiLtJ_G0039168.1 mouse_genomes_project 7 126510263 126510393 - Gm24154 snoRNA snoRNA MGP_NODShiLtJ_T0010741.1 MGP_NODShiLtJ_G0008874.1 mouse_genomes_project 7 24933899 24934009 - Mir6537 miRNA miRNA MGP_NODShiLtJ_T0010734.1 MGP_NODShiLtJ_G0008867.1 mouse_genomes_project 7 16679811 16679921 + Gm25068 miRNA miRNA MGP_NODShiLtJ_T0011573.1 MGP_NODShiLtJ_G0009706.1 mouse_genomes_project 7 38100229 38100525 - Gm24550 misc_RNA misc_RNA MGP_NODShiLtJ_T0008922.1 MGP_NODShiLtJ_G0007181.1 mouse_genomes_project 7 135402836 135406918 - 9030407P20Rik lincRNA lincRNA MGP_NODShiLtJ_T0008923.1 MGP_NODShiLtJ_G0007181.1 mouse_genomes_project 7 135403132 135406958 - 9030407P20Rik lincRNA lincRNA MGP_NODShiLtJ_T0010774.1 MGP_NODShiLtJ_G0008907.1 mouse_genomes_project 7 67703742 67703822 - Gm23490 miRNA miRNA MGP_NODShiLtJ_T0099499.1 MGP_NODShiLtJ_G0037893.1 mouse_genomes_project 7 92719706 92719864 + Gm22177 snRNA snRNA MGP_NODShiLtJ_T0015763.1 MGP_NODShiLtJ_G0013871.1 mouse_genomes_project 7 112510023 112510376 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085273.1 MGP_NODShiLtJ_G0032563.1 mouse_genomes_project 7 118564908 118573075 - MGP_NODShiLtJ_P0085273 Hpx protein_coding protein_coding MGP_NODShiLtJ_T0083245.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47243553 47259416 - MGP_NODShiLtJ_P0083245 Pold1 protein_coding protein_coding MGP_NODShiLtJ_T0083246.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47243556 47244725 - Pold1 protein_coding retained_intron MGP_NODShiLtJ_T0083247.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47243558 47259418 - Pold1 protein_coding retained_intron MGP_NODShiLtJ_T0083248.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47243561 47245890 - Pold1 protein_coding retained_intron MGP_NODShiLtJ_T0083249.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47243593 47259407 - MGP_NODShiLtJ_P0083249 Pold1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083250.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47244087 47244996 - Pold1 protein_coding retained_intron MGP_NODShiLtJ_T0083251.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47244702 47246757 - Pold1 protein_coding retained_intron MGP_NODShiLtJ_T0083252.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47248318 47249218 - Pold1 protein_coding retained_intron MGP_NODShiLtJ_T0083253.1 MGP_NODShiLtJ_G0031985.1 mouse_genomes_project 7 47252892 47259302 - MGP_NODShiLtJ_P0083253 Pold1 protein_coding protein_coding MGP_NODShiLtJ_T0098075.1 MGP_NODShiLtJ_G0036487.1 mouse_genomes_project 7 15349191 15349310 + n-R5s151 rRNA rRNA MGP_NODShiLtJ_T0086623.1 MGP_NODShiLtJ_G0032888.1 mouse_genomes_project 7 143592418 143595878 - BC017158 protein_coding retained_intron MGP_NODShiLtJ_T0086624.1 MGP_NODShiLtJ_G0032888.1 mouse_genomes_project 7 143592418 143621786 - MGP_NODShiLtJ_P0086624 BC017158 protein_coding protein_coding MGP_NODShiLtJ_T0086625.1 MGP_NODShiLtJ_G0032888.1 mouse_genomes_project 7 143593150 143621724 - BC017158 protein_coding retained_intron MGP_NODShiLtJ_T0086626.1 MGP_NODShiLtJ_G0032888.1 mouse_genomes_project 7 143593150 143621725 - BC017158 protein_coding retained_intron MGP_NODShiLtJ_T0086627.1 MGP_NODShiLtJ_G0032888.1 mouse_genomes_project 7 143593369 143621711 - MGP_NODShiLtJ_P0086627 BC017158 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086628.1 MGP_NODShiLtJ_G0032888.1 mouse_genomes_project 7 143596994 143621191 - BC017158 protein_coding retained_intron MGP_NODShiLtJ_T0086629.1 MGP_NODShiLtJ_G0032888.1 mouse_genomes_project 7 143597330 143612307 - BC017158 protein_coding retained_intron MGP_NODShiLtJ_T0086630.1 MGP_NODShiLtJ_G0032888.1 mouse_genomes_project 7 143611566 143614217 - MGP_NODShiLtJ_P0086630 BC017158 protein_coding protein_coding MGP_NODShiLtJ_T0084506.1 MGP_NODShiLtJ_G0032280.1 mouse_genomes_project 7 95561447 95562529 - MGP_NODShiLtJ_P0084506 Olfr310 protein_coding protein_coding MGP_NODShiLtJ_T0085383.1 MGP_NODShiLtJ_G0032605.1 mouse_genomes_project 7 120932221 121089234 + MGP_NODShiLtJ_P0085383 Ppfibp2 protein_coding protein_coding MGP_NODShiLtJ_T0085384.1 MGP_NODShiLtJ_G0032605.1 mouse_genomes_project 7 120943785 121092924 + MGP_NODShiLtJ_P0085384 Ppfibp2 protein_coding protein_coding MGP_NODShiLtJ_T0008845.1 MGP_NODShiLtJ_G0007136.1 mouse_genomes_project 7 81442676 81452434 - Gm45004 lincRNA lincRNA MGP_NODShiLtJ_T0100767.1 MGP_NODShiLtJ_G0039161.1 mouse_genomes_project 7 118615550 118615689 - Gm22504 snoRNA snoRNA MGP_NODShiLtJ_T0015722.1 MGP_NODShiLtJ_G0013830.1 mouse_genomes_project 7 82158908 82159139 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086852.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149488404 149549062 - MGP_NODShiLtJ_P0086852 Dhx32 protein_coding protein_coding MGP_NODShiLtJ_T0086853.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149488408 149531670 - Dhx32 protein_coding processed_transcript MGP_NODShiLtJ_T0086854.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149488572 149555892 - MGP_NODShiLtJ_P0086854 Dhx32 protein_coding protein_coding MGP_NODShiLtJ_T0086855.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149488690 149549034 - MGP_NODShiLtJ_P0086855 Dhx32 protein_coding protein_coding MGP_NODShiLtJ_T0086856.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149490506 149499290 - Dhx32 protein_coding processed_transcript MGP_NODShiLtJ_T0086857.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149518943 149530873 - Dhx32 protein_coding processed_transcript MGP_NODShiLtJ_T0086858.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149519243 149531230 - MGP_NODShiLtJ_P0086858 Dhx32 protein_coding protein_coding MGP_NODShiLtJ_T0086859.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149519388 149548946 - MGP_NODShiLtJ_P0086859 Dhx32 protein_coding protein_coding MGP_NODShiLtJ_T0086860.1 MGP_NODShiLtJ_G0032932.1 mouse_genomes_project 7 149531078 149548768 - MGP_NODShiLtJ_P0086860 Dhx32 protein_coding protein_coding MGP_NODShiLtJ_T0015790.1 MGP_NODShiLtJ_G0013898.1 mouse_genomes_project 7 140110383 140111040 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084035.1 MGP_NODShiLtJ_G0032183.1 mouse_genomes_project 7 78482051 78485731 - MGP_NODShiLtJ_P0084035 Gm10295 protein_coding protein_coding MGP_NODShiLtJ_T0085609.1 MGP_NODShiLtJ_G0032688.1 mouse_genomes_project 7 128270688 128316275 - MGP_NODShiLtJ_P0085609 Copb1 protein_coding protein_coding MGP_NODShiLtJ_T0008959.1 MGP_NODShiLtJ_G0007205.1 mouse_genomes_project 7 145110231 145186938 + Gm44868 lincRNA lincRNA MGP_NODShiLtJ_T0008960.1 MGP_NODShiLtJ_G0007205.1 mouse_genomes_project 7 145110319 145113988 + Gm44868 lincRNA lincRNA MGP_NODShiLtJ_T0081246.1 MGP_NODShiLtJ_G0031465.1 mouse_genomes_project 7 11216621 11222171 + MGP_NODShiLtJ_P0081246 Zfp446 protein_coding protein_coding MGP_NODShiLtJ_T0081247.1 MGP_NODShiLtJ_G0031465.1 mouse_genomes_project 7 11216621 11223084 + MGP_NODShiLtJ_P0081247 Zfp446 protein_coding protein_coding MGP_NODShiLtJ_T0081248.1 MGP_NODShiLtJ_G0031465.1 mouse_genomes_project 7 11216621 11222171 + MGP_NODShiLtJ_P0081248 Zfp446 protein_coding protein_coding MGP_NODShiLtJ_T0081249.1 MGP_NODShiLtJ_G0031465.1 mouse_genomes_project 7 11216666 11220238 + Zfp446 protein_coding retained_intron MGP_NODShiLtJ_T0081250.1 MGP_NODShiLtJ_G0031465.1 mouse_genomes_project 7 11217011 11223090 + MGP_NODShiLtJ_P0081250 Zfp446 protein_coding protein_coding MGP_NODShiLtJ_T0081251.1 MGP_NODShiLtJ_G0031465.1 mouse_genomes_project 7 11218293 11223115 + Zfp446 protein_coding retained_intron MGP_NODShiLtJ_T0008867.1 MGP_NODShiLtJ_G0007149.1 mouse_genomes_project 7 88494973 88496854 - 6330403N20Rik lincRNA lincRNA MGP_NODShiLtJ_T0002220.1 MGP_NODShiLtJ_G0002131.1 mouse_genomes_project 7 84405400 84406982 - TEC TEC MGP_NODShiLtJ_T0085078.1 MGP_NODShiLtJ_G0032423.1 mouse_genomes_project 7 114673449 114681001 - MGP_NODShiLtJ_P0085078 Trim21 protein_coding protein_coding MGP_NODShiLtJ_T0085079.1 MGP_NODShiLtJ_G0032423.1 mouse_genomes_project 7 114673449 114681001 - MGP_NODShiLtJ_P0085079 Trim21 protein_coding protein_coding MGP_NODShiLtJ_T0100788.1 MGP_NODShiLtJ_G0039182.1 mouse_genomes_project 7 160055194 160055321 - Gm23297 snoRNA snoRNA MGP_NODShiLtJ_T0010718.1 MGP_NODShiLtJ_G0008851.1 mouse_genomes_project 7 132135 132217 + Mir291a miRNA miRNA MGP_NODShiLtJ_T0008934.1 MGP_NODShiLtJ_G0007189.1 mouse_genomes_project 7 140471514 140472635 - Gm44766 lincRNA lincRNA MGP_NODShiLtJ_T0102078.1 MGP_NODShiLtJ_G0040245.1 mouse_genomes_project 7 10575516 10576128 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008855.1 MGP_NODShiLtJ_G0007144.1 mouse_genomes_project 7 87604843 87636988 + Mir9-3hg lincRNA lincRNA MGP_NODShiLtJ_T0008856.1 MGP_NODShiLtJ_G0007144.1 mouse_genomes_project 7 87604855 87637193 + Mir9-3hg lincRNA lincRNA MGP_NODShiLtJ_T0008857.1 MGP_NODShiLtJ_G0007144.1 mouse_genomes_project 7 87604934 87640088 + Mir9-3hg lincRNA lincRNA MGP_NODShiLtJ_T0008858.1 MGP_NODShiLtJ_G0007144.1 mouse_genomes_project 7 87604938 87637078 + Mir9-3hg lincRNA lincRNA MGP_NODShiLtJ_T0008859.1 MGP_NODShiLtJ_G0007144.1 mouse_genomes_project 7 87620032 87638276 + Mir9-3hg lincRNA lincRNA MGP_NODShiLtJ_T0008860.1 MGP_NODShiLtJ_G0007144.1 mouse_genomes_project 7 87620235 87636944 + Mir9-3hg lincRNA lincRNA MGP_NODShiLtJ_T0008861.1 MGP_NODShiLtJ_G0007144.1 mouse_genomes_project 7 87632641 87637729 + Mir9-3hg lincRNA lincRNA MGP_NODShiLtJ_T0082901.1 MGP_NODShiLtJ_G0031900.1 mouse_genomes_project 7 36406728 36421568 + MGP_NODShiLtJ_P0082901 Slc7a10 protein_coding protein_coding MGP_NODShiLtJ_T0082902.1 MGP_NODShiLtJ_G0031900.1 mouse_genomes_project 7 36406728 36415902 + MGP_NODShiLtJ_P0082902 Slc7a10 protein_coding protein_coding MGP_NODShiLtJ_T0082903.1 MGP_NODShiLtJ_G0031900.1 mouse_genomes_project 7 36406764 36421364 + MGP_NODShiLtJ_P0082903 Slc7a10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082904.1 MGP_NODShiLtJ_G0031900.1 mouse_genomes_project 7 36406825 36418401 + MGP_NODShiLtJ_P0082904 Slc7a10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082905.1 MGP_NODShiLtJ_G0031900.1 mouse_genomes_project 7 36419364 36421345 + MGP_NODShiLtJ_P0082905 Slc7a10 protein_coding protein_coding MGP_NODShiLtJ_T0080902.1 MGP_NODShiLtJ_G0031344.1 mouse_genomes_project 7 856262 920698 - MGP_NODShiLtJ_P0080902 protein_coding protein_coding MGP_NODShiLtJ_T0015652.1 MGP_NODShiLtJ_G0013760.1 mouse_genomes_project 7 36763520 36765783 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085713.1 MGP_NODShiLtJ_G0032705.1 mouse_genomes_project 7 132843560 132914685 - MGP_NODShiLtJ_P0085713 Syt17 protein_coding protein_coding MGP_NODShiLtJ_T0085714.1 MGP_NODShiLtJ_G0032705.1 mouse_genomes_project 7 132843561 132913685 - Syt17 protein_coding retained_intron MGP_NODShiLtJ_T0085715.1 MGP_NODShiLtJ_G0032705.1 mouse_genomes_project 7 132843563 132919309 - MGP_NODShiLtJ_P0085715 Syt17 protein_coding protein_coding MGP_NODShiLtJ_T0085716.1 MGP_NODShiLtJ_G0032705.1 mouse_genomes_project 7 132877910 132919277 - MGP_NODShiLtJ_P0085716 Syt17 protein_coding protein_coding MGP_NODShiLtJ_T0008734.1 MGP_NODShiLtJ_G0007048.1 mouse_genomes_project 7 19191214 19196003 + Gm26600 lincRNA lincRNA MGP_NODShiLtJ_T0081121.1 MGP_NODShiLtJ_G0031402.1 mouse_genomes_project 7 3166479 3167506 - MGP_NODShiLtJ_P0081121 Vmn1r64 protein_coding protein_coding MGP_NODShiLtJ_T0085111.1 MGP_NODShiLtJ_G0032453.1 mouse_genomes_project 7 115325618 115326572 - MGP_NODShiLtJ_P0085111 Olfr586 protein_coding protein_coding MGP_NODShiLtJ_T0081494.1 MGP_NODShiLtJ_G0031541.1 mouse_genomes_project 7 17094086 17100521 + MGP_NODShiLtJ_P0081494 Ceacam11 protein_coding protein_coding MGP_NODShiLtJ_T0085208.1 MGP_NODShiLtJ_G0032525.1 mouse_genomes_project 7 117214464 117215391 - MGP_NODShiLtJ_P0085208 Olfr655 protein_coding protein_coding MGP_NODShiLtJ_T0010810.1 MGP_NODShiLtJ_G0008943.1 mouse_genomes_project 7 127692750 127692852 - Gm23700 miRNA miRNA MGP_NODShiLtJ_T0015555.1 MGP_NODShiLtJ_G0013663.1 mouse_genomes_project 7 1003026 1003306 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085388.1 MGP_NODShiLtJ_G0032608.1 mouse_genomes_project 7 121130339 121153448 - MGP_NODShiLtJ_P0085388 Ovch2 protein_coding protein_coding MGP_NODShiLtJ_T0102196.1 MGP_NODShiLtJ_G0040362.1 mouse_genomes_project 7 115718378 115719345 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083638.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49700204 49738959 - MGP_NODShiLtJ_P0083638 Hps5 protein_coding protein_coding MGP_NODShiLtJ_T0083639.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49700204 49738931 - MGP_NODShiLtJ_P0083639 Hps5 protein_coding protein_coding MGP_NODShiLtJ_T0083640.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49700204 49738610 - MGP_NODShiLtJ_P0083640 Hps5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083641.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49700210 49738813 - MGP_NODShiLtJ_P0083641 Hps5 protein_coding protein_coding MGP_NODShiLtJ_T0083642.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49700717 49738610 - Hps5 protein_coding retained_intron MGP_NODShiLtJ_T0083643.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49700978 49709164 - Hps5 protein_coding processed_transcript MGP_NODShiLtJ_T0083644.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49702682 49716091 - MGP_NODShiLtJ_P0083644 Hps5 protein_coding protein_coding MGP_NODShiLtJ_T0083645.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49705045 49713162 - MGP_NODShiLtJ_P0083645 Hps5 protein_coding protein_coding MGP_NODShiLtJ_T0083646.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49707125 49708607 - Hps5 protein_coding retained_intron MGP_NODShiLtJ_T0083647.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49717013 49719597 - Hps5 protein_coding retained_intron MGP_NODShiLtJ_T0083648.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49727688 49738996 - MGP_NODShiLtJ_P0083648 Hps5 protein_coding protein_coding MGP_NODShiLtJ_T0083649.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49729459 49738635 - MGP_NODShiLtJ_P0083649 Hps5 protein_coding protein_coding MGP_NODShiLtJ_T0083650.1 MGP_NODShiLtJ_G0032089.1 mouse_genomes_project 7 49730241 49732244 - Hps5 protein_coding processed_transcript MGP_NODShiLtJ_T0099530.1 MGP_NODShiLtJ_G0037924.1 mouse_genomes_project 7 157420632 157420741 - Gm24962 snRNA snRNA MGP_NODShiLtJ_T0083365.1 MGP_NODShiLtJ_G0032017.1 mouse_genomes_project 7 47900797 47904721 - MGP_NODShiLtJ_P0083365 Rps11 protein_coding protein_coding MGP_NODShiLtJ_T0015691.1 MGP_NODShiLtJ_G0013799.1 mouse_genomes_project 7 51842932 51843206 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010818.1 MGP_NODShiLtJ_G0008951.1 mouse_genomes_project 7 142962611 142962687 + Mir762 miRNA miRNA MGP_NODShiLtJ_T0081354.1 MGP_NODShiLtJ_G0031505.1 mouse_genomes_project 7 14934201 14954900 + MGP_NODShiLtJ_P0081354 Napa protein_coding protein_coding MGP_NODShiLtJ_T0081355.1 MGP_NODShiLtJ_G0031505.1 mouse_genomes_project 7 14934350 14950460 + Napa protein_coding processed_transcript MGP_NODShiLtJ_T0081356.1 MGP_NODShiLtJ_G0031505.1 mouse_genomes_project 7 14934374 14950059 + Napa protein_coding retained_intron MGP_NODShiLtJ_T0081357.1 MGP_NODShiLtJ_G0031505.1 mouse_genomes_project 7 14934380 14946234 + Napa protein_coding processed_transcript MGP_NODShiLtJ_T0081358.1 MGP_NODShiLtJ_G0031505.1 mouse_genomes_project 7 14945975 14951150 + Napa protein_coding retained_intron MGP_NODShiLtJ_T0081359.1 MGP_NODShiLtJ_G0031505.1 mouse_genomes_project 7 14950568 14953484 + Napa protein_coding retained_intron MGP_NODShiLtJ_T0081360.1 MGP_NODShiLtJ_G0031505.1 mouse_genomes_project 7 14952028 14953664 + Napa protein_coding processed_transcript MGP_NODShiLtJ_T0085196.1 MGP_NODShiLtJ_G0032518.1 mouse_genomes_project 7 116988622 116997294 - MGP_NODShiLtJ_P0085196 Trim30c protein_coding protein_coding MGP_NODShiLtJ_T0082433.1 MGP_NODShiLtJ_G0031801.1 mouse_genomes_project 7 30371676 30383522 + MGP_NODShiLtJ_P0082433 Zfp30 protein_coding protein_coding MGP_NODShiLtJ_T0082434.1 MGP_NODShiLtJ_G0031801.1 mouse_genomes_project 7 30371707 30383515 + MGP_NODShiLtJ_P0082434 Zfp30 protein_coding protein_coding MGP_NODShiLtJ_T0082435.1 MGP_NODShiLtJ_G0031801.1 mouse_genomes_project 7 30371732 30380725 + Zfp30 protein_coding retained_intron MGP_NODShiLtJ_T0084369.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89154882 89199891 - Sec11a protein_coding processed_transcript MGP_NODShiLtJ_T0084370.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89157709 89199859 - MGP_NODShiLtJ_P0084370 Sec11a protein_coding protein_coding MGP_NODShiLtJ_T0084371.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89164850 89176139 - Sec11a protein_coding processed_transcript MGP_NODShiLtJ_T0084372.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89164850 89174042 - Sec11a protein_coding retained_intron MGP_NODShiLtJ_T0084373.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89164850 89200126 - MGP_NODShiLtJ_P0084373 Sec11a protein_coding protein_coding MGP_NODShiLtJ_T0084374.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89165039 89165804 - Sec11a protein_coding retained_intron MGP_NODShiLtJ_T0084375.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89165134 89200126 - MGP_NODShiLtJ_P0084375 Sec11a protein_coding protein_coding MGP_NODShiLtJ_T0084376.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89165236 89199857 - Sec11a protein_coding processed_transcript MGP_NODShiLtJ_T0084377.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89165562 89200126 - MGP_NODShiLtJ_P0084377 Sec11a protein_coding protein_coding MGP_NODShiLtJ_T0084378.1 MGP_NODShiLtJ_G0032239.1 mouse_genomes_project 7 89170346 89200088 - Sec11a protein_coding retained_intron MGP_NODShiLtJ_T0082594.1 MGP_NODShiLtJ_G0031842.1 mouse_genomes_project 7 31219829 31222278 - MGP_NODShiLtJ_P0082594 Psenen protein_coding protein_coding MGP_NODShiLtJ_T0002192.1 MGP_NODShiLtJ_G0002104.1 mouse_genomes_project 7 62939805 62944479 + TEC TEC MGP_NODShiLtJ_T0086707.1 MGP_NODShiLtJ_G0032898.1 mouse_genomes_project 7 145868624 146000163 - MGP_NODShiLtJ_P0086707 Ate1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0086708.1 MGP_NODShiLtJ_G0032898.1 mouse_genomes_project 7 145868664 146000232 - MGP_NODShiLtJ_P0086708 Ate1 protein_coding protein_coding MGP_NODShiLtJ_T0086709.1 MGP_NODShiLtJ_G0032898.1 mouse_genomes_project 7 145868664 146000241 - MGP_NODShiLtJ_P0086709 Ate1 protein_coding protein_coding MGP_NODShiLtJ_T0086710.1 MGP_NODShiLtJ_G0032898.1 mouse_genomes_project 7 145871696 146000663 - MGP_NODShiLtJ_P0086710 Ate1 protein_coding protein_coding MGP_NODShiLtJ_T0086711.1 MGP_NODShiLtJ_G0032898.1 mouse_genomes_project 7 145871696 146000663 - MGP_NODShiLtJ_P0086711 Ate1 protein_coding protein_coding MGP_NODShiLtJ_T0085214.1 MGP_NODShiLtJ_G0032531.1 mouse_genomes_project 7 117296315 117297284 + MGP_NODShiLtJ_P0085214 Olfr659 protein_coding protein_coding MGP_NODShiLtJ_T0083120.1 MGP_NODShiLtJ_G0031954.1 mouse_genomes_project 7 46222928 46234062 + MGP_NODShiLtJ_P0083120 Zfp819 protein_coding protein_coding MGP_NODShiLtJ_T0083121.1 MGP_NODShiLtJ_G0031954.1 mouse_genomes_project 7 46222968 46228456 + MGP_NODShiLtJ_P0083121 Zfp819 protein_coding protein_coding MGP_NODShiLtJ_T0083122.1 MGP_NODShiLtJ_G0031954.1 mouse_genomes_project 7 46222984 46234131 + MGP_NODShiLtJ_P0083122 Zfp819 protein_coding protein_coding MGP_NODShiLtJ_T0083123.1 MGP_NODShiLtJ_G0031954.1 mouse_genomes_project 7 46225666 46233764 + MGP_NODShiLtJ_P0083123 Zfp819 protein_coding protein_coding MGP_NODShiLtJ_T0085391.1 MGP_NODShiLtJ_G0032611.1 mouse_genomes_project 7 121339257 121340190 + MGP_NODShiLtJ_P0085391 Olfr473 protein_coding protein_coding MGP_NODShiLtJ_T0010767.1 MGP_NODShiLtJ_G0008900.1 mouse_genomes_project 7 58585630 58585738 - Gm27921 miRNA miRNA MGP_NODShiLtJ_T0002195.1 MGP_NODShiLtJ_G0002107.1 mouse_genomes_project 7 70634050 70634486 - TEC TEC MGP_NODShiLtJ_T0002257.1 MGP_NODShiLtJ_G0002168.1 mouse_genomes_project 7 141138529 141140071 - TEC TEC MGP_NODShiLtJ_T0081510.1 MGP_NODShiLtJ_G0031552.1 mouse_genomes_project 7 18118324 18136304 - MGP_NODShiLtJ_P0081510 protein_coding protein_coding MGP_NODShiLtJ_T0083125.1 MGP_NODShiLtJ_G0031956.1 mouse_genomes_project 7 46267188 46275994 - MGP_NODShiLtJ_P0083125 Siglece protein_coding protein_coding MGP_NODShiLtJ_T0083126.1 MGP_NODShiLtJ_G0031956.1 mouse_genomes_project 7 46267659 46275186 - MGP_NODShiLtJ_P0083126 Siglece protein_coding protein_coding MGP_NODShiLtJ_T0083820.1 MGP_NODShiLtJ_G0032136.1 mouse_genomes_project 7 62548700 62657327 - MGP_NODShiLtJ_P0083820 Gabra5 protein_coding protein_coding MGP_NODShiLtJ_T0083821.1 MGP_NODShiLtJ_G0032136.1 mouse_genomes_project 7 62548747 62656689 - MGP_NODShiLtJ_P0083821 Gabra5 protein_coding protein_coding MGP_NODShiLtJ_T0083822.1 MGP_NODShiLtJ_G0032136.1 mouse_genomes_project 7 62548933 62657377 - MGP_NODShiLtJ_P0083822 Gabra5 protein_coding protein_coding MGP_NODShiLtJ_T0083459.1 MGP_NODShiLtJ_G0032042.1 mouse_genomes_project 7 48295076 48318158 - MGP_NODShiLtJ_P0083459 Dhdh protein_coding protein_coding MGP_NODShiLtJ_T0083460.1 MGP_NODShiLtJ_G0032042.1 mouse_genomes_project 7 48300849 48307917 - Dhdh protein_coding processed_transcript MGP_NODShiLtJ_T0084731.1 MGP_NODShiLtJ_G0032346.1 mouse_genomes_project 7 110103448 110114065 - MGP_NODShiLtJ_P0084731 Tsku protein_coding protein_coding MGP_NODShiLtJ_T0084732.1 MGP_NODShiLtJ_G0032346.1 mouse_genomes_project 7 110103448 110114105 - MGP_NODShiLtJ_P0084732 Tsku protein_coding protein_coding MGP_NODShiLtJ_T0084733.1 MGP_NODShiLtJ_G0032346.1 mouse_genomes_project 7 110103448 110114065 - MGP_NODShiLtJ_P0084733 Tsku protein_coding protein_coding MGP_NODShiLtJ_T0084734.1 MGP_NODShiLtJ_G0032346.1 mouse_genomes_project 7 110103448 110114069 - MGP_NODShiLtJ_P0084734 Tsku protein_coding protein_coding MGP_NODShiLtJ_T0084735.1 MGP_NODShiLtJ_G0032346.1 mouse_genomes_project 7 110103566 110112856 - MGP_NODShiLtJ_P0084735 Tsku protein_coding protein_coding MGP_NODShiLtJ_T0084736.1 MGP_NODShiLtJ_G0032346.1 mouse_genomes_project 7 110103566 110112856 - MGP_NODShiLtJ_P0084736 Tsku protein_coding protein_coding MGP_NODShiLtJ_T0084737.1 MGP_NODShiLtJ_G0032346.1 mouse_genomes_project 7 110103648 110114065 - MGP_NODShiLtJ_P0084737 Tsku protein_coding protein_coding MGP_NODShiLtJ_T0084738.1 MGP_NODShiLtJ_G0032346.1 mouse_genomes_project 7 110106318 110112964 - Tsku protein_coding processed_transcript MGP_NODShiLtJ_T0008847.1 MGP_NODShiLtJ_G0007138.1 mouse_genomes_project 7 82300885 82338585 - 0610006L08Rik lincRNA lincRNA MGP_NODShiLtJ_T0008848.1 MGP_NODShiLtJ_G0007138.1 mouse_genomes_project 7 82305682 82338582 - 0610006L08Rik lincRNA lincRNA MGP_NODShiLtJ_T0085435.1 MGP_NODShiLtJ_G0032647.1 mouse_genomes_project 7 122739752 122774474 - MGP_NODShiLtJ_P0085435 Lmo1 protein_coding protein_coding MGP_NODShiLtJ_T0086891.1 MGP_NODShiLtJ_G0032946.1 mouse_genomes_project 7 153378292 153417198 - 9430038I01Rik protein_coding processed_transcript MGP_NODShiLtJ_T0086892.1 MGP_NODShiLtJ_G0032946.1 mouse_genomes_project 7 153378292 153417204 - MGP_NODShiLtJ_P0086892 9430038I01Rik protein_coding protein_coding MGP_NODShiLtJ_T0086893.1 MGP_NODShiLtJ_G0032946.1 mouse_genomes_project 7 153378855 153417177 - MGP_NODShiLtJ_P0086893 9430038I01Rik protein_coding protein_coding MGP_NODShiLtJ_T0086894.1 MGP_NODShiLtJ_G0032946.1 mouse_genomes_project 7 153386470 153417198 - 9430038I01Rik protein_coding retained_intron MGP_NODShiLtJ_T0086895.1 MGP_NODShiLtJ_G0032946.1 mouse_genomes_project 7 153386502 153417174 - MGP_NODShiLtJ_P0086895 9430038I01Rik protein_coding protein_coding MGP_NODShiLtJ_T0085317.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118716236 118722520 + MGP_NODShiLtJ_P0085317 Ilk protein_coding protein_coding MGP_NODShiLtJ_T0085318.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118716315 118722513 + Ilk protein_coding retained_intron MGP_NODShiLtJ_T0085319.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118716369 118722520 + MGP_NODShiLtJ_P0085319 Ilk protein_coding protein_coding MGP_NODShiLtJ_T0085320.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118716377 118720637 + MGP_NODShiLtJ_P0085320 Ilk protein_coding protein_coding MGP_NODShiLtJ_T0085321.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118716745 118720956 + Ilk protein_coding retained_intron MGP_NODShiLtJ_T0085322.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118716767 118721070 + Ilk protein_coding retained_intron MGP_NODShiLtJ_T0085324.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118719781 118721359 + Ilk protein_coding retained_intron MGP_NODShiLtJ_T0085325.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118720104 118720769 + Ilk protein_coding retained_intron MGP_NODShiLtJ_T0085326.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118720104 118721503 + MGP_NODShiLtJ_P0085326 Ilk protein_coding protein_coding MGP_NODShiLtJ_T0085327.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118720565 118721505 + Ilk protein_coding retained_intron MGP_NODShiLtJ_T0085328.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118720776 118721691 + Ilk protein_coding retained_intron MGP_NODShiLtJ_T0085329.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118721177 118722371 + Ilk protein_coding retained_intron MGP_NODShiLtJ_T0085330.1 MGP_NODShiLtJ_G0032569.1 mouse_genomes_project 7 118721375 118722252 + Ilk protein_coding processed_transcript MGP_NODShiLtJ_T0085013.1 MGP_NODShiLtJ_G0032405.1 mouse_genomes_project 7 114095006 114098083 - MGP_NODShiLtJ_P0085013 Il18bp protein_coding protein_coding MGP_NODShiLtJ_T0002249.1 MGP_NODShiLtJ_G0002160.1 mouse_genomes_project 7 137212520 137215680 + TEC TEC MGP_NODShiLtJ_T0102152.1 MGP_NODShiLtJ_G0040318.1 mouse_genomes_project 7 51740612 51741068 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015806.1 MGP_NODShiLtJ_G0013914.1 mouse_genomes_project 7 143976872 143977172 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087265.1 MGP_NODShiLtJ_G0033043.1 mouse_genomes_project 7 157813850 157830212 + MGP_NODShiLtJ_P0087265 Tspan4 protein_coding protein_coding MGP_NODShiLtJ_T0087266.1 MGP_NODShiLtJ_G0033043.1 mouse_genomes_project 7 157813853 157830225 + MGP_NODShiLtJ_P0087266 Tspan4 protein_coding protein_coding MGP_NODShiLtJ_T0087267.1 MGP_NODShiLtJ_G0033043.1 mouse_genomes_project 7 157814076 157828029 + MGP_NODShiLtJ_P0087267 Tspan4 protein_coding protein_coding MGP_NODShiLtJ_T0087268.1 MGP_NODShiLtJ_G0033043.1 mouse_genomes_project 7 157820626 157831362 + MGP_NODShiLtJ_P0087268 Tspan4 protein_coding protein_coding MGP_NODShiLtJ_T0087269.1 MGP_NODShiLtJ_G0033043.1 mouse_genomes_project 7 157829897 157831369 + Tspan4 protein_coding retained_intron MGP_NODShiLtJ_T0010794.1 MGP_NODShiLtJ_G0008927.1 mouse_genomes_project 7 83298819 83298929 - Gm23251 miRNA miRNA MGP_NODShiLtJ_T0015815.1 MGP_NODShiLtJ_G0013923.1 mouse_genomes_project 7 155852697 155853844 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085233.1 MGP_NODShiLtJ_G0032549.1 mouse_genomes_project 7 118109616 118110634 - MGP_NODShiLtJ_P0085233 Olfr686 protein_coding protein_coding MGP_NODShiLtJ_T0002271.1 MGP_NODShiLtJ_G0002182.1 mouse_genomes_project 7 159624168 159624403 + TEC TEC MGP_NODShiLtJ_T0082633.1 MGP_NODShiLtJ_G0031844.1 mouse_genomes_project 7 31224520 31227058 + MGP_NODShiLtJ_P0082633 Igflr1 protein_coding protein_coding MGP_NODShiLtJ_T0082634.1 MGP_NODShiLtJ_G0031844.1 mouse_genomes_project 7 31225175 31227055 + MGP_NODShiLtJ_P0082634 Igflr1 protein_coding protein_coding MGP_NODShiLtJ_T0087548.1 MGP_NODShiLtJ_G0033104.1 mouse_genomes_project 7 161989828 162004427 + MGP_NODShiLtJ_P0087548 Mrgprd protein_coding protein_coding MGP_NODShiLtJ_T0081134.1 MGP_NODShiLtJ_G0031407.1 mouse_genomes_project 7 3566192 3585672 + MGP_NODShiLtJ_P0081134 Galp protein_coding protein_coding MGP_NODShiLtJ_T0081135.1 MGP_NODShiLtJ_G0031407.1 mouse_genomes_project 7 3572339 3580905 + Galp protein_coding processed_transcript MGP_NODShiLtJ_T0081193.1 MGP_NODShiLtJ_G0031439.1 mouse_genomes_project 7 8573996 8619331 + MGP_NODShiLtJ_P0081193 Nlrp4b protein_coding protein_coding MGP_NODShiLtJ_T0081194.1 MGP_NODShiLtJ_G0031439.1 mouse_genomes_project 7 8574024 8619341 + MGP_NODShiLtJ_P0081194 Nlrp4b protein_coding protein_coding MGP_NODShiLtJ_T0081195.1 MGP_NODShiLtJ_G0031439.1 mouse_genomes_project 7 8602419 8614575 + MGP_NODShiLtJ_P0081195 Nlrp4b protein_coding protein_coding MGP_NODShiLtJ_T0086320.1 MGP_NODShiLtJ_G0032826.1 mouse_genomes_project 7 142200973 142202202 - MGP_NODShiLtJ_P0086320 Kif22 protein_coding protein_coding MGP_NODShiLtJ_T0086321.1 MGP_NODShiLtJ_G0032826.1 mouse_genomes_project 7 142200975 142215914 - MGP_NODShiLtJ_P0086321 Kif22 protein_coding protein_coding MGP_NODShiLtJ_T0086322.1 MGP_NODShiLtJ_G0032826.1 mouse_genomes_project 7 142200976 142201361 - Kif22 protein_coding retained_intron MGP_NODShiLtJ_T0086323.1 MGP_NODShiLtJ_G0032826.1 mouse_genomes_project 7 142202348 142205949 - Kif22 protein_coding retained_intron MGP_NODShiLtJ_T0086324.1 MGP_NODShiLtJ_G0032826.1 mouse_genomes_project 7 142205472 142215852 - Kif22 protein_coding retained_intron MGP_NODShiLtJ_T0086325.1 MGP_NODShiLtJ_G0032826.1 mouse_genomes_project 7 142206829 142215849 - MGP_NODShiLtJ_P0086325 Kif22 protein_coding protein_coding MGP_NODShiLtJ_T0015609.1 MGP_NODShiLtJ_G0013717.1 mouse_genomes_project 7 25303012 25303687 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086927.1 MGP_NODShiLtJ_G0032954.1 mouse_genomes_project 7 155191592 155296347 - MGP_NODShiLtJ_P0086927 Stk32c protein_coding protein_coding MGP_NODShiLtJ_T0086928.1 MGP_NODShiLtJ_G0032954.1 mouse_genomes_project 7 155191592 155270551 - MGP_NODShiLtJ_P0086928 Stk32c protein_coding protein_coding MGP_NODShiLtJ_T0015727.1 MGP_NODShiLtJ_G0013835.1 mouse_genomes_project 7 83336300 83336652 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081259.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11267886 11274758 + MGP_NODShiLtJ_P0081259 Trim28 protein_coding protein_coding MGP_NODShiLtJ_T0081260.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11271339 11272847 + Trim28 protein_coding retained_intron MGP_NODShiLtJ_T0081261.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11271551 11272225 + Trim28 protein_coding retained_intron MGP_NODShiLtJ_T0081262.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11271743 11273322 + Trim28 protein_coding retained_intron MGP_NODShiLtJ_T0081263.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11272127 11273088 + Trim28 protein_coding retained_intron MGP_NODShiLtJ_T0081264.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11272602 11273649 + Trim28 protein_coding retained_intron MGP_NODShiLtJ_T0081265.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11272813 11273718 + Trim28 protein_coding retained_intron MGP_NODShiLtJ_T0081266.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11273426 11274070 + Trim28 protein_coding retained_intron MGP_NODShiLtJ_T0081267.1 MGP_NODShiLtJ_G0031468.1 mouse_genomes_project 7 11274094 11274755 + Trim28 protein_coding retained_intron MGP_NODShiLtJ_T0082867.1 MGP_NODShiLtJ_G0031894.1 mouse_genomes_project 7 35484472 35535734 - MGP_NODShiLtJ_P0082867 Lsm14a protein_coding protein_coding MGP_NODShiLtJ_T0082868.1 MGP_NODShiLtJ_G0031894.1 mouse_genomes_project 7 35484489 35493511 - MGP_NODShiLtJ_P0082868 Lsm14a protein_coding protein_coding MGP_NODShiLtJ_T0082869.1 MGP_NODShiLtJ_G0031894.1 mouse_genomes_project 7 35485541 35540455 - MGP_NODShiLtJ_P0082869 Lsm14a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082870.1 MGP_NODShiLtJ_G0031894.1 mouse_genomes_project 7 35485764 35513322 - MGP_NODShiLtJ_P0082870 Lsm14a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082871.1 MGP_NODShiLtJ_G0031894.1 mouse_genomes_project 7 35490622 35493572 - Lsm14a protein_coding retained_intron MGP_NODShiLtJ_T0082872.1 MGP_NODShiLtJ_G0031894.1 mouse_genomes_project 7 35493498 35535495 - MGP_NODShiLtJ_P0082872 Lsm14a protein_coding protein_coding MGP_NODShiLtJ_T0082873.1 MGP_NODShiLtJ_G0031894.1 mouse_genomes_project 7 35493829 35535096 - MGP_NODShiLtJ_P0082873 Lsm14a protein_coding protein_coding MGP_NODShiLtJ_T0082874.1 MGP_NODShiLtJ_G0031894.1 mouse_genomes_project 7 35532596 35535177 - Lsm14a protein_coding retained_intron MGP_NODShiLtJ_T0086055.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141490184 141497218 - MGP_NODShiLtJ_P0086055 Spns1 protein_coding protein_coding MGP_NODShiLtJ_T0086056.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141490193 141497552 - Spns1 protein_coding retained_intron MGP_NODShiLtJ_T0086057.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141490193 141497552 - MGP_NODShiLtJ_P0086057 Spns1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086058.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141490861 141497170 - MGP_NODShiLtJ_P0086058 Spns1 protein_coding protein_coding MGP_NODShiLtJ_T0086059.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141491346 141493046 - Spns1 protein_coding retained_intron MGP_NODShiLtJ_T0086060.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141491706 141497236 - MGP_NODShiLtJ_P0086060 Spns1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086061.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141491990 141492689 - Spns1 protein_coding retained_intron MGP_NODShiLtJ_T0086062.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141492871 141497348 - MGP_NODShiLtJ_P0086062 Spns1 protein_coding protein_coding MGP_NODShiLtJ_T0086063.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141493786 141494502 - Spns1 protein_coding retained_intron MGP_NODShiLtJ_T0086064.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141494414 141496869 - Spns1 protein_coding processed_transcript MGP_NODShiLtJ_T0086065.1 MGP_NODShiLtJ_G0032784.1 mouse_genomes_project 7 141496838 141497562 - Spns1 protein_coding processed_transcript MGP_NODShiLtJ_T0087119.1 MGP_NODShiLtJ_G0033020.1 mouse_genomes_project 7 157477833 157486442 - MGP_NODShiLtJ_P0087119 Rnh1 protein_coding protein_coding MGP_NODShiLtJ_T0087120.1 MGP_NODShiLtJ_G0033020.1 mouse_genomes_project 7 157477833 157490429 - MGP_NODShiLtJ_P0087120 Rnh1 protein_coding protein_coding MGP_NODShiLtJ_T0005226.1 MGP_NODShiLtJ_G0004429.1 mouse_genomes_project 7 136509743 136510682 + 1700069B07Rik antisense antisense MGP_NODShiLtJ_T0005227.1 MGP_NODShiLtJ_G0004429.1 mouse_genomes_project 7 136509857 136510680 + 1700069B07Rik antisense antisense MGP_NODShiLtJ_T0081652.1 MGP_NODShiLtJ_G0031591.1 mouse_genomes_project 7 18932043 18966192 - MGP_NODShiLtJ_P0081652 Ppp1r37 protein_coding protein_coding MGP_NODShiLtJ_T0081323.1 MGP_NODShiLtJ_G0031489.1 mouse_genomes_project 7 12921946 12924069 - MGP_NODShiLtJ_P0081323 Obox8 protein_coding protein_coding MGP_NODShiLtJ_T0085097.1 MGP_NODShiLtJ_G0032440.1 mouse_genomes_project 7 115074464 115075409 - MGP_NODShiLtJ_P0085097 Olfr569 protein_coding protein_coding MGP_NODShiLtJ_T0002171.1 MGP_NODShiLtJ_G0002083.1 mouse_genomes_project 7 41201305 41203660 - TEC TEC MGP_NODShiLtJ_T0085240.1 MGP_NODShiLtJ_G0032556.1 mouse_genomes_project 7 118318661 118347495 - MGP_NODShiLtJ_P0085240 Fam160a2 protein_coding protein_coding MGP_NODShiLtJ_T0085241.1 MGP_NODShiLtJ_G0032556.1 mouse_genomes_project 7 118318661 118347517 - MGP_NODShiLtJ_P0085241 Fam160a2 protein_coding protein_coding MGP_NODShiLtJ_T0085243.1 MGP_NODShiLtJ_G0032556.1 mouse_genomes_project 7 118326055 118347517 - MGP_NODShiLtJ_P0085243 Fam160a2 protein_coding protein_coding MGP_NODShiLtJ_T0085244.1 MGP_NODShiLtJ_G0032556.1 mouse_genomes_project 7 118326055 118347448 - MGP_NODShiLtJ_P0085244 Fam160a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085245.1 MGP_NODShiLtJ_G0032556.1 mouse_genomes_project 7 118326056 118347471 - MGP_NODShiLtJ_P0085245 Fam160a2 protein_coding protein_coding MGP_NODShiLtJ_T0085246.1 MGP_NODShiLtJ_G0032556.1 mouse_genomes_project 7 118326056 118347474 - MGP_NODShiLtJ_P0085246 Fam160a2 protein_coding protein_coding MGP_NODShiLtJ_T0085247.1 MGP_NODShiLtJ_G0032556.1 mouse_genomes_project 7 118326521 118329424 - Fam160a2 protein_coding retained_intron MGP_NODShiLtJ_T0085248.1 MGP_NODShiLtJ_G0032556.1 mouse_genomes_project 7 118332829 118336551 - Fam160a2 protein_coding retained_intron MGP_NODShiLtJ_T0015785.1 MGP_NODShiLtJ_G0013893.1 mouse_genomes_project 7 136955901 136956315 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087471.1 MGP_NODShiLtJ_G0033083.1 mouse_genomes_project 7 160136247 160159421 - MGP_NODShiLtJ_P0087471 Tnfrsf26 protein_coding protein_coding MGP_NODShiLtJ_T0083144.1 MGP_NODShiLtJ_G0031965.1 mouse_genomes_project 7 46449701 46456105 + MGP_NODShiLtJ_P0083144 Klk7 protein_coding protein_coding MGP_NODShiLtJ_T0005172.1 MGP_NODShiLtJ_G0004394.1 mouse_genomes_project 7 86274667 86275793 + 4921513I08Rik antisense antisense MGP_NODShiLtJ_T0084708.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109779000 109852282 - MGP_NODShiLtJ_P0084708 Myo7a protein_coding protein_coding MGP_NODShiLtJ_T0084709.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109779003 109798554 - MGP_NODShiLtJ_P0084709 Myo7a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084710.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109779341 109840604 - MGP_NODShiLtJ_P0084710 Myo7a protein_coding protein_coding MGP_NODShiLtJ_T0084711.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109779565 109852261 - MGP_NODShiLtJ_P0084711 Myo7a protein_coding protein_coding MGP_NODShiLtJ_T0084712.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109779567 109852053 - MGP_NODShiLtJ_P0084712 Myo7a protein_coding protein_coding MGP_NODShiLtJ_T0084713.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109791820 109794386 - Myo7a protein_coding retained_intron MGP_NODShiLtJ_T0084714.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109810332 109813919 - Myo7a protein_coding processed_transcript MGP_NODShiLtJ_T0084715.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109829011 109843983 - Myo7a protein_coding processed_transcript MGP_NODShiLtJ_T0084716.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109829586 109834740 - Myo7a protein_coding processed_transcript MGP_NODShiLtJ_T0084717.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109829626 109834739 - Myo7a protein_coding processed_transcript MGP_NODShiLtJ_T0084718.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109829635 109852251 - MGP_NODShiLtJ_P0084718 Myo7a protein_coding protein_coding MGP_NODShiLtJ_T0084719.1 MGP_NODShiLtJ_G0032341.1 mouse_genomes_project 7 109840088 109852250 - Myo7a protein_coding processed_transcript MGP_NODShiLtJ_T0008919.1 MGP_NODShiLtJ_G0007178.1 mouse_genomes_project 7 130873475 130875575 + Gm45151 lincRNA lincRNA MGP_NODShiLtJ_T0102070.1 MGP_NODShiLtJ_G0040237.1 mouse_genomes_project 7 10044947 10045787 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010728.1 MGP_NODShiLtJ_G0008861.1 mouse_genomes_project 7 1670223 1670333 - Gm23577 miRNA miRNA MGP_NODShiLtJ_T0002227.1 MGP_NODShiLtJ_G0002138.1 mouse_genomes_project 7 87567866 87570015 + TEC TEC MGP_NODShiLtJ_T0002198.1 MGP_NODShiLtJ_G0002110.1 mouse_genomes_project 7 70723893 70727296 - TEC TEC MGP_NODShiLtJ_T0015612.1 MGP_NODShiLtJ_G0013720.1 mouse_genomes_project 7 25521377 25521954 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083938.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72612542 72627911 + Snrpa1 protein_coding processed_transcript MGP_NODShiLtJ_T0083939.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72613839 72623083 + Snrpa1 protein_coding processed_transcript MGP_NODShiLtJ_T0083940.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72613878 72628155 + MGP_NODShiLtJ_P0083940 Snrpa1 protein_coding protein_coding MGP_NODShiLtJ_T0083941.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72614072 72627944 + Snrpa1 protein_coding processed_transcript MGP_NODShiLtJ_T0083942.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72614084 72628148 + MGP_NODShiLtJ_P0083942 Snrpa1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083943.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72614104 72625166 + Snrpa1 protein_coding retained_intron MGP_NODShiLtJ_T0083944.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72614143 72627938 + Snrpa1 protein_coding processed_transcript MGP_NODShiLtJ_T0083945.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72614321 72615707 + Snrpa1 protein_coding processed_transcript MGP_NODShiLtJ_T0083946.1 MGP_NODShiLtJ_G0032164.1 mouse_genomes_project 7 72622408 72623080 + Snrpa1 protein_coding retained_intron MGP_NODShiLtJ_T0087098.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157388891 157402726 + MGP_NODShiLtJ_P0087098 Pkp3 protein_coding protein_coding MGP_NODShiLtJ_T0087099.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157389820 157393320 + MGP_NODShiLtJ_P0087099 Pkp3 protein_coding protein_coding MGP_NODShiLtJ_T0087100.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157390433 157402726 + MGP_NODShiLtJ_P0087100 Pkp3 protein_coding protein_coding MGP_NODShiLtJ_T0087101.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157390448 157393795 + MGP_NODShiLtJ_P0087101 Pkp3 protein_coding protein_coding MGP_NODShiLtJ_T0087102.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157390453 157393369 + MGP_NODShiLtJ_P0087102 Pkp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087103.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157399976 157401093 + Pkp3 protein_coding retained_intron MGP_NODShiLtJ_T0087104.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157400361 157402723 + Pkp3 protein_coding retained_intron MGP_NODShiLtJ_T0087105.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157400423 157401064 + Pkp3 protein_coding retained_intron MGP_NODShiLtJ_T0087106.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157401626 157402132 + Pkp3 protein_coding retained_intron MGP_NODShiLtJ_T0087107.1 MGP_NODShiLtJ_G0033016.1 mouse_genomes_project 7 157402076 157402725 + MGP_NODShiLtJ_P0087107 Pkp3 protein_coding protein_coding MGP_NODShiLtJ_T0010729.1 MGP_NODShiLtJ_G0008862.1 mouse_genomes_project 7 2333123 2333201 - Gm26217 miRNA miRNA MGP_NODShiLtJ_T0086335.1 MGP_NODShiLtJ_G0032830.1 mouse_genomes_project 7 142311473 142318147 - MGP_NODShiLtJ_P0086335 Spn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086336.1 MGP_NODShiLtJ_G0032830.1 mouse_genomes_project 7 142312711 142316899 - MGP_NODShiLtJ_P0086336 Spn protein_coding protein_coding MGP_NODShiLtJ_T0086337.1 MGP_NODShiLtJ_G0032830.1 mouse_genomes_project 7 142312943 142318156 - MGP_NODShiLtJ_P0086337 Spn protein_coding protein_coding MGP_NODShiLtJ_T0005105.1 MGP_NODShiLtJ_G0004344.1 mouse_genomes_project 7 19128022 19134820 + Gm20512 antisense antisense MGP_NODShiLtJ_T0087060.1 MGP_NODShiLtJ_G0033004.1 mouse_genomes_project 7 157135846 157154044 - MGP_NODShiLtJ_P0087060 Sirt3 protein_coding protein_coding MGP_NODShiLtJ_T0087061.1 MGP_NODShiLtJ_G0033004.1 mouse_genomes_project 7 157135846 157154484 - MGP_NODShiLtJ_P0087061 Sirt3 protein_coding protein_coding MGP_NODShiLtJ_T0087062.1 MGP_NODShiLtJ_G0033004.1 mouse_genomes_project 7 157137196 157150322 - MGP_NODShiLtJ_P0087062 Sirt3 protein_coding protein_coding MGP_NODShiLtJ_T0087063.1 MGP_NODShiLtJ_G0033004.1 mouse_genomes_project 7 157141665 157154044 - MGP_NODShiLtJ_P0087063 Sirt3 protein_coding protein_coding MGP_NODShiLtJ_T0087064.1 MGP_NODShiLtJ_G0033004.1 mouse_genomes_project 7 157148608 157154044 - MGP_NODShiLtJ_P0087064 Sirt3 protein_coding protein_coding MGP_NODShiLtJ_T0086024.1 MGP_NODShiLtJ_G0032780.1 mouse_genomes_project 7 140951656 141157716 - MGP_NODShiLtJ_P0086024 Gsg1l protein_coding protein_coding MGP_NODShiLtJ_T0005123.1 MGP_NODShiLtJ_G0004358.1 mouse_genomes_project 7 29660715 29664369 - antisense antisense MGP_NODShiLtJ_T0099480.1 MGP_NODShiLtJ_G0037874.1 mouse_genomes_project 7 31002659 31002852 - Gm25259 snRNA snRNA MGP_NODShiLtJ_T0002169.1 MGP_NODShiLtJ_G0002081.1 mouse_genomes_project 7 38900352 38901159 - TEC TEC MGP_NODShiLtJ_T0002168.1 MGP_NODShiLtJ_G0002080.1 mouse_genomes_project 7 38848431 38850725 - TEC TEC MGP_NODShiLtJ_T0085167.1 MGP_NODShiLtJ_G0032506.1 mouse_genomes_project 7 116680250 116681189 + MGP_NODShiLtJ_P0085167 Olfr646 protein_coding protein_coding MGP_NODShiLtJ_T0005173.1 MGP_NODShiLtJ_G0004395.1 mouse_genomes_project 7 86607691 86609900 + Gm9885 antisense antisense MGP_NODShiLtJ_T0005174.1 MGP_NODShiLtJ_G0004395.1 mouse_genomes_project 7 86607691 86609896 + Gm9885 antisense antisense MGP_NODShiLtJ_T0102182.1 MGP_NODShiLtJ_G0040348.1 mouse_genomes_project 7 95324236 95325133 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085691.1 MGP_NODShiLtJ_G0032701.1 mouse_genomes_project 7 131782042 132056251 + Xylt1 protein_coding retained_intron MGP_NODShiLtJ_T0085692.1 MGP_NODShiLtJ_G0032701.1 mouse_genomes_project 7 131782042 132091556 + MGP_NODShiLtJ_P0085692 Xylt1 protein_coding protein_coding MGP_NODShiLtJ_T0085693.1 MGP_NODShiLtJ_G0032701.1 mouse_genomes_project 7 131884887 131963885 + Xylt1 protein_coding retained_intron MGP_NODShiLtJ_T0085413.1 MGP_NODShiLtJ_G0032633.1 mouse_genomes_project 7 122180389 122181322 + MGP_NODShiLtJ_P0085413 Olfr508 protein_coding protein_coding MGP_NODShiLtJ_T0084966.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113923845 113936727 - MGP_NODShiLtJ_P0084966 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084967.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113923845 113929965 - MGP_NODShiLtJ_P0084967 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084968.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113923845 113936751 - MGP_NODShiLtJ_P0084968 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084969.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113923845 113936832 - MGP_NODShiLtJ_P0084969 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084970.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113923845 113936825 - MGP_NODShiLtJ_P0084970 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084971.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113923845 113933488 - MGP_NODShiLtJ_P0084971 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084972.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113924737 113935595 - MGP_NODShiLtJ_P0084972 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084973.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113924747 113936758 - MGP_NODShiLtJ_P0084973 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084974.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113924806 113936830 - MGP_NODShiLtJ_P0084974 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084975.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113925039 113935368 - MGP_NODShiLtJ_P0084975 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084976.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113929742 113936832 - MGP_NODShiLtJ_P0084976 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084977.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113929744 113935062 - MGP_NODShiLtJ_P0084977 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084978.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113929747 113936831 - MGP_NODShiLtJ_P0084978 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084979.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113929780 113934711 - MGP_NODShiLtJ_P0084979 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084980.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113929819 113935366 - MGP_NODShiLtJ_P0084980 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084981.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113929897 113936628 - MGP_NODShiLtJ_P0084981 Folr1 protein_coding protein_coding MGP_NODShiLtJ_T0084982.1 MGP_NODShiLtJ_G0032399.1 mouse_genomes_project 7 113934508 113936145 - Folr1 protein_coding processed_transcript MGP_NODShiLtJ_T0010720.1 MGP_NODShiLtJ_G0008853.1 mouse_genomes_project 7 132414 132476 - Mir292b miRNA miRNA MGP_NODShiLtJ_T0015704.1 MGP_NODShiLtJ_G0013812.1 mouse_genomes_project 7 61931667 61932087 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081850.1 MGP_NODShiLtJ_G0031659.1 mouse_genomes_project 7 24672487 24681701 + MGP_NODShiLtJ_P0081850 Dmrtc2 protein_coding protein_coding MGP_NODShiLtJ_T0010744.1 MGP_NODShiLtJ_G0008877.1 mouse_genomes_project 7 26582122 26582232 + Gm25947 miRNA miRNA MGP_NODShiLtJ_T0081589.1 MGP_NODShiLtJ_G0031573.1 mouse_genomes_project 7 18575786 18588361 + MGP_NODShiLtJ_P0081589 Gpr4 protein_coding protein_coding MGP_NODShiLtJ_T0087227.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773312 157779225 - Pidd1 protein_coding retained_intron MGP_NODShiLtJ_T0087228.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773312 157778589 - MGP_NODShiLtJ_P0087228 Pidd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087229.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773312 157778586 - MGP_NODShiLtJ_P0087229 Pidd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087230.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773312 157779258 - MGP_NODShiLtJ_P0087230 Pidd1 protein_coding protein_coding MGP_NODShiLtJ_T0087231.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773316 157779241 - Pidd1 protein_coding retained_intron MGP_NODShiLtJ_T0087232.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773324 157778589 - Pidd1 protein_coding retained_intron MGP_NODShiLtJ_T0087233.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773714 157778588 - MGP_NODShiLtJ_P0087233 Pidd1 protein_coding protein_coding MGP_NODShiLtJ_T0087234.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773724 157778553 - MGP_NODShiLtJ_P0087234 Pidd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087235.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157773729 157778553 - Pidd1 protein_coding retained_intron MGP_NODShiLtJ_T0087236.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157774698 157775357 - Pidd1 protein_coding retained_intron MGP_NODShiLtJ_T0087237.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157776282 157777522 - Pidd1 protein_coding retained_intron MGP_NODShiLtJ_T0087238.1 MGP_NODShiLtJ_G0033037.1 mouse_genomes_project 7 157777398 157779227 - Pidd1 protein_coding processed_transcript MGP_NODShiLtJ_T0081268.1 MGP_NODShiLtJ_G0031469.1 mouse_genomes_project 7 11275728 11278502 - MGP_NODShiLtJ_P0081268 Chmp2a protein_coding protein_coding MGP_NODShiLtJ_T0002170.1 MGP_NODShiLtJ_G0002082.1 mouse_genomes_project 7 39054018 39057277 - TEC TEC MGP_NODShiLtJ_T0010787.1 MGP_NODShiLtJ_G0008920.1 mouse_genomes_project 7 68214572 68214660 - Gm24923 miRNA miRNA MGP_NODShiLtJ_T0008941.1 MGP_NODShiLtJ_G0007195.1 mouse_genomes_project 7 142141132 142144921 - lincRNA lincRNA MGP_NODShiLtJ_T0008942.1 MGP_NODShiLtJ_G0007195.1 mouse_genomes_project 7 142142035 142145230 - lincRNA lincRNA MGP_NODShiLtJ_T0008943.1 MGP_NODShiLtJ_G0007195.1 mouse_genomes_project 7 142142035 142145509 - lincRNA lincRNA MGP_NODShiLtJ_T0008944.1 MGP_NODShiLtJ_G0007195.1 mouse_genomes_project 7 142142035 142145248 - lincRNA lincRNA MGP_NODShiLtJ_T0008945.1 MGP_NODShiLtJ_G0007195.1 mouse_genomes_project 7 142142036 142145199 - lincRNA lincRNA MGP_NODShiLtJ_T0008946.1 MGP_NODShiLtJ_G0007195.1 mouse_genomes_project 7 142142037 142145257 - lincRNA lincRNA MGP_NODShiLtJ_T0008947.1 MGP_NODShiLtJ_G0007195.1 mouse_genomes_project 7 142144264 142145463 - lincRNA lincRNA MGP_NODShiLtJ_T0081123.1 MGP_NODShiLtJ_G0031404.1 mouse_genomes_project 7 3351804 3444902 + MGP_NODShiLtJ_P0081123 Nlrp4c protein_coding protein_coding MGP_NODShiLtJ_T0008783.1 MGP_NODShiLtJ_G0007088.1 mouse_genomes_project 7 42633863 42643110 + Gm28307 lincRNA lincRNA MGP_NODShiLtJ_T0084250.1 MGP_NODShiLtJ_G0032224.1 mouse_genomes_project 7 88457161 88461317 + MGP_NODShiLtJ_P0084250 Ngrn protein_coding protein_coding MGP_NODShiLtJ_T0084251.1 MGP_NODShiLtJ_G0032224.1 mouse_genomes_project 7 88457166 88461317 + Ngrn protein_coding retained_intron MGP_NODShiLtJ_T0086372.1 MGP_NODShiLtJ_G0032836.1 mouse_genomes_project 7 142438190 142448458 + MGP_NODShiLtJ_P0086372 Zfp771 protein_coding protein_coding MGP_NODShiLtJ_T0086373.1 MGP_NODShiLtJ_G0032836.1 mouse_genomes_project 7 142439005 142439616 + Zfp771 protein_coding processed_transcript MGP_NODShiLtJ_T0086374.1 MGP_NODShiLtJ_G0032836.1 mouse_genomes_project 7 142439091 142447527 + MGP_NODShiLtJ_P0086374 Zfp771 protein_coding protein_coding MGP_NODShiLtJ_T0005156.1 MGP_NODShiLtJ_G0004382.1 mouse_genomes_project 7 47056158 47056883 + Gm44780 antisense antisense MGP_NODShiLtJ_T0082745.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31784980 31794035 - MGP_NODShiLtJ_P0082745 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082746.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31784984 31794677 - MGP_NODShiLtJ_P0082746 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082747.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31784988 31792623 - Fxyd5 protein_coding retained_intron MGP_NODShiLtJ_T0082748.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31784988 31790191 - Fxyd5 protein_coding retained_intron MGP_NODShiLtJ_T0082749.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31784988 31791245 - MGP_NODShiLtJ_P0082749 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082750.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31784988 31794314 - MGP_NODShiLtJ_P0082750 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082751.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31784991 31794274 - MGP_NODShiLtJ_P0082751 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082752.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31784991 31794274 - MGP_NODShiLtJ_P0082752 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082753.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31785021 31794342 - MGP_NODShiLtJ_P0082753 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082754.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31785065 31794336 - MGP_NODShiLtJ_P0082754 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082755.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31788699 31794312 - MGP_NODShiLtJ_P0082755 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082756.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31788728 31794309 - MGP_NODShiLtJ_P0082756 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082757.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31788730 31794283 - MGP_NODShiLtJ_P0082757 Fxyd5 protein_coding protein_coding MGP_NODShiLtJ_T0082758.1 MGP_NODShiLtJ_G0031870.1 mouse_genomes_project 7 31793366 31794336 - Fxyd5 protein_coding retained_intron MGP_NODShiLtJ_T0083293.1 MGP_NODShiLtJ_G0031995.1 mouse_genomes_project 7 47571243 47574646 - MGP_NODShiLtJ_P0083293 Atf5 protein_coding protein_coding MGP_NODShiLtJ_T0083294.1 MGP_NODShiLtJ_G0031995.1 mouse_genomes_project 7 47571244 47576390 - MGP_NODShiLtJ_P0083294 Atf5 protein_coding protein_coding MGP_NODShiLtJ_T0081235.1 MGP_NODShiLtJ_G0031462.1 mouse_genomes_project 7 11147536 11151942 + MGP_NODShiLtJ_P0081235 Rps5 protein_coding protein_coding MGP_NODShiLtJ_T0081236.1 MGP_NODShiLtJ_G0031462.1 mouse_genomes_project 7 11147536 11151941 + MGP_NODShiLtJ_P0081236 Rps5 protein_coding protein_coding MGP_NODShiLtJ_T0081237.1 MGP_NODShiLtJ_G0031462.1 mouse_genomes_project 7 11147564 11151750 + MGP_NODShiLtJ_P0081237 Rps5 protein_coding protein_coding MGP_NODShiLtJ_T0081238.1 MGP_NODShiLtJ_G0031462.1 mouse_genomes_project 7 11147577 11151476 + Rps5 protein_coding retained_intron MGP_NODShiLtJ_T0081239.1 MGP_NODShiLtJ_G0031462.1 mouse_genomes_project 7 11147582 11148623 + Rps5 protein_coding retained_intron MGP_NODShiLtJ_T0081240.1 MGP_NODShiLtJ_G0031462.1 mouse_genomes_project 7 11147683 11151750 + MGP_NODShiLtJ_P0081240 Rps5 protein_coding protein_coding MGP_NODShiLtJ_T0081241.1 MGP_NODShiLtJ_G0031462.1 mouse_genomes_project 7 11151293 11151940 + Rps5 protein_coding retained_intron MGP_NODShiLtJ_T0081212.1 MGP_NODShiLtJ_G0031453.1 mouse_genomes_project 7 10703055 10708620 + Zfp606 protein_coding retained_intron MGP_NODShiLtJ_T0081213.1 MGP_NODShiLtJ_G0031453.1 mouse_genomes_project 7 10703113 10720258 + MGP_NODShiLtJ_P0081213 Zfp606 protein_coding protein_coding MGP_NODShiLtJ_T0081214.1 MGP_NODShiLtJ_G0031453.1 mouse_genomes_project 7 10704444 10719035 + MGP_NODShiLtJ_P0081214 Zfp606 protein_coding protein_coding MGP_NODShiLtJ_T0081215.1 MGP_NODShiLtJ_G0031453.1 mouse_genomes_project 7 10714226 10720249 + Zfp606 protein_coding retained_intron MGP_NODShiLtJ_T0081660.1 MGP_NODShiLtJ_G0031594.1 mouse_genomes_project 7 18986020 19008950 - MGP_NODShiLtJ_P0081660 Clasrp protein_coding protein_coding MGP_NODShiLtJ_T0082484.1 MGP_NODShiLtJ_G0031816.1 mouse_genomes_project 7 30791367 30799679 - MGP_NODShiLtJ_P0082484 Zfp146 protein_coding protein_coding MGP_NODShiLtJ_T0082485.1 MGP_NODShiLtJ_G0031816.1 mouse_genomes_project 7 30792819 30793469 - Zfp146 protein_coding processed_transcript MGP_NODShiLtJ_T0081597.1 MGP_NODShiLtJ_G0031576.1 mouse_genomes_project 7 18653936 18657374 - MGP_NODShiLtJ_P0081597 Ppm1n protein_coding protein_coding MGP_NODShiLtJ_T0081598.1 MGP_NODShiLtJ_G0031576.1 mouse_genomes_project 7 18653973 18655707 - Ppm1n protein_coding retained_intron MGP_NODShiLtJ_T0081599.1 MGP_NODShiLtJ_G0031576.1 mouse_genomes_project 7 18655126 18655461 - Ppm1n protein_coding retained_intron MGP_NODShiLtJ_T0081600.1 MGP_NODShiLtJ_G0031576.1 mouse_genomes_project 7 18656126 18656911 - Ppm1n protein_coding retained_intron MGP_NODShiLtJ_T0015777.1 MGP_NODShiLtJ_G0013885.1 mouse_genomes_project 7 124260564 124260894 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086160.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141849412 141853860 - MGP_NODShiLtJ_P0086160 Coro1a protein_coding protein_coding MGP_NODShiLtJ_T0086161.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141849412 141854456 - MGP_NODShiLtJ_P0086161 Coro1a protein_coding protein_coding MGP_NODShiLtJ_T0086162.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141849520 141852813 - MGP_NODShiLtJ_P0086162 Coro1a protein_coding protein_coding MGP_NODShiLtJ_T0086163.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141849950 141850867 - Coro1a protein_coding retained_intron MGP_NODShiLtJ_T0086164.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141849994 141850900 - Coro1a protein_coding retained_intron MGP_NODShiLtJ_T0086165.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141850630 141851735 - Coro1a protein_coding retained_intron MGP_NODShiLtJ_T0086166.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141850631 141852814 - MGP_NODShiLtJ_P0086166 Coro1a protein_coding protein_coding MGP_NODShiLtJ_T0086167.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141850969 141852112 - Coro1a protein_coding retained_intron MGP_NODShiLtJ_T0086168.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141850986 141854394 - MGP_NODShiLtJ_P0086168 Coro1a protein_coding protein_coding MGP_NODShiLtJ_T0086169.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141851530 141854187 - MGP_NODShiLtJ_P0086169 Coro1a protein_coding protein_coding MGP_NODShiLtJ_T0086170.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141851541 141857421 - MGP_NODShiLtJ_P0086170 Coro1a protein_coding protein_coding MGP_NODShiLtJ_T0086171.1 MGP_NODShiLtJ_G0032802.1 mouse_genomes_project 7 141852471 141854393 - Coro1a protein_coding retained_intron MGP_NODShiLtJ_T0083610.1 MGP_NODShiLtJ_G0032081.1 mouse_genomes_project 7 49312414 49351315 + MGP_NODShiLtJ_P0083610 Kcnc1 protein_coding protein_coding MGP_NODShiLtJ_T0083611.1 MGP_NODShiLtJ_G0032081.1 mouse_genomes_project 7 49313565 49356345 + MGP_NODShiLtJ_P0083611 Kcnc1 protein_coding protein_coding MGP_NODShiLtJ_T0083612.1 MGP_NODShiLtJ_G0032081.1 mouse_genomes_project 7 49340640 49345762 + Kcnc1 protein_coding processed_transcript MGP_NODShiLtJ_T0100756.1 MGP_NODShiLtJ_G0039150.1 mouse_genomes_project 7 75756427 75756564 - Gm23795 snoRNA snoRNA MGP_NODShiLtJ_T0083085.1 MGP_NODShiLtJ_G0031945.1 mouse_genomes_project 7 46043636 46046189 + MGP_NODShiLtJ_P0083085 Cldnd2 protein_coding protein_coding MGP_NODShiLtJ_T0083086.1 MGP_NODShiLtJ_G0031945.1 mouse_genomes_project 7 46044430 46046154 + MGP_NODShiLtJ_P0083086 Cldnd2 protein_coding protein_coding MGP_NODShiLtJ_T0085415.1 MGP_NODShiLtJ_G0032635.1 mouse_genomes_project 7 122227244 122228189 + MGP_NODShiLtJ_P0085415 Olfr510 protein_coding protein_coding MGP_NODShiLtJ_T0015560.1 MGP_NODShiLtJ_G0013668.1 mouse_genomes_project 7 1489484 1489947 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086466.1 MGP_NODShiLtJ_G0032856.1 mouse_genomes_project 7 142903940 142962910 - MGP_NODShiLtJ_P0086466 Bcl7c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086467.1 MGP_NODShiLtJ_G0032856.1 mouse_genomes_project 7 142909292 142962764 - MGP_NODShiLtJ_P0086467 Bcl7c protein_coding protein_coding MGP_NODShiLtJ_T0086468.1 MGP_NODShiLtJ_G0032856.1 mouse_genomes_project 7 142909448 142962587 - MGP_NODShiLtJ_P0086468 Bcl7c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086469.1 MGP_NODShiLtJ_G0032856.1 mouse_genomes_project 7 142957473 142962652 - MGP_NODShiLtJ_P0086469 Bcl7c protein_coding protein_coding MGP_NODShiLtJ_T0086470.1 MGP_NODShiLtJ_G0032856.1 mouse_genomes_project 7 142959099 142963058 - MGP_NODShiLtJ_P0086470 Bcl7c protein_coding protein_coding MGP_NODShiLtJ_T0086471.1 MGP_NODShiLtJ_G0032856.1 mouse_genomes_project 7 142959109 142961425 - MGP_NODShiLtJ_P0086471 Bcl7c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086472.1 MGP_NODShiLtJ_G0032856.1 mouse_genomes_project 7 142959915 142962200 - Bcl7c protein_coding processed_transcript MGP_NODShiLtJ_T0002165.1 MGP_NODShiLtJ_G0002077.1 mouse_genomes_project 7 38075225 38077582 + TEC TEC MGP_NODShiLtJ_T0002206.1 MGP_NODShiLtJ_G0002118.1 mouse_genomes_project 7 80842024 80843271 - TEC TEC MGP_NODShiLtJ_T0086597.1 MGP_NODShiLtJ_G0032882.1 mouse_genomes_project 7 143519516 143520470 - MGP_NODShiLtJ_P0086597 Cox6a2 protein_coding protein_coding MGP_NODShiLtJ_T0010722.1 MGP_NODShiLtJ_G0008855.1 mouse_genomes_project 7 133559 133639 + Mir293 miRNA miRNA MGP_NODShiLtJ_T0083424.1 MGP_NODShiLtJ_G0032033.1 mouse_genomes_project 7 48171108 48173801 - MGP_NODShiLtJ_P0083424 Lin7b protein_coding protein_coding MGP_NODShiLtJ_T0083425.1 MGP_NODShiLtJ_G0032033.1 mouse_genomes_project 7 48171110 48171820 - Lin7b protein_coding retained_intron MGP_NODShiLtJ_T0083426.1 MGP_NODShiLtJ_G0032033.1 mouse_genomes_project 7 48172427 48173533 - Lin7b protein_coding retained_intron MGP_NODShiLtJ_T0083427.1 MGP_NODShiLtJ_G0032033.1 mouse_genomes_project 7 48172481 48173403 - Lin7b protein_coding retained_intron MGP_NODShiLtJ_T0083428.1 MGP_NODShiLtJ_G0032033.1 mouse_genomes_project 7 48172780 48173564 - Lin7b protein_coding retained_intron MGP_NODShiLtJ_T0102056.1 MGP_NODShiLtJ_G0040223.1 mouse_genomes_project 7 7789812 7826344 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083726.1 MGP_NODShiLtJ_G0032117.1 mouse_genomes_project 7 53644846 53727389 + MGP_NODShiLtJ_P0083726 Prmt3 protein_coding protein_coding MGP_NODShiLtJ_T0083727.1 MGP_NODShiLtJ_G0032117.1 mouse_genomes_project 7 53644846 53649006 + MGP_NODShiLtJ_P0083727 Prmt3 protein_coding protein_coding MGP_NODShiLtJ_T0083728.1 MGP_NODShiLtJ_G0032117.1 mouse_genomes_project 7 53644937 53648663 + Prmt3 protein_coding processed_transcript MGP_NODShiLtJ_T0083729.1 MGP_NODShiLtJ_G0032117.1 mouse_genomes_project 7 53644937 53694498 + MGP_NODShiLtJ_P0083729 Prmt3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083730.1 MGP_NODShiLtJ_G0032117.1 mouse_genomes_project 7 53644939 53647136 + Prmt3 protein_coding processed_transcript MGP_NODShiLtJ_T0083731.1 MGP_NODShiLtJ_G0032117.1 mouse_genomes_project 7 53645044 53653815 + Prmt3 protein_coding processed_transcript MGP_NODShiLtJ_T0083732.1 MGP_NODShiLtJ_G0032117.1 mouse_genomes_project 7 53646376 53653845 + MGP_NODShiLtJ_P0083732 Prmt3 protein_coding protein_coding MGP_NODShiLtJ_T0083733.1 MGP_NODShiLtJ_G0032117.1 mouse_genomes_project 7 53666067 53694694 + MGP_NODShiLtJ_P0083733 Prmt3 protein_coding protein_coding MGP_NODShiLtJ_T0084518.1 MGP_NODShiLtJ_G0032291.1 mouse_genomes_project 7 96174593 96175592 - MGP_NODShiLtJ_P0084518 Olfr298 protein_coding protein_coding MGP_NODShiLtJ_T0083837.1 MGP_NODShiLtJ_G0032140.1 mouse_genomes_project 7 65249881 65296160 - MGP_NODShiLtJ_P0083837 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083838.1 MGP_NODShiLtJ_G0032140.1 mouse_genomes_project 7 65249881 65296160 - MGP_NODShiLtJ_P0083838 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083839.1 MGP_NODShiLtJ_G0032140.1 mouse_genomes_project 7 65251866 65255883 - protein_coding processed_transcript MGP_NODShiLtJ_T0083840.1 MGP_NODShiLtJ_G0032140.1 mouse_genomes_project 7 65255716 65256139 - protein_coding processed_transcript MGP_NODShiLtJ_T0085238.1 MGP_NODShiLtJ_G0032554.1 mouse_genomes_project 7 118297382 118298351 - MGP_NODShiLtJ_P0085238 Olfr691 protein_coding protein_coding MGP_NODShiLtJ_T0015670.1 MGP_NODShiLtJ_G0013778.1 mouse_genomes_project 7 43728158 43728796 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081136.1 MGP_NODShiLtJ_G0031408.1 mouse_genomes_project 7 3591803 3611906 + MGP_NODShiLtJ_P0081136 Zscan5b protein_coding protein_coding MGP_NODShiLtJ_T0081137.1 MGP_NODShiLtJ_G0031408.1 mouse_genomes_project 7 3591820 3603688 + MGP_NODShiLtJ_P0081137 Zscan5b protein_coding protein_coding MGP_NODShiLtJ_T0081138.1 MGP_NODShiLtJ_G0031408.1 mouse_genomes_project 7 3602462 3611672 + MGP_NODShiLtJ_P0081138 Zscan5b protein_coding protein_coding MGP_NODShiLtJ_T0085075.1 MGP_NODShiLtJ_G0032420.1 mouse_genomes_project 7 114596588 114597475 - MGP_NODShiLtJ_P0085075 Olfr545 protein_coding protein_coding MGP_NODShiLtJ_T0084949.1 MGP_NODShiLtJ_G0032394.1 mouse_genomes_project 7 113609137 113620826 - MGP_NODShiLtJ_P0084949 protein_coding protein_coding MGP_NODShiLtJ_T0082818.1 MGP_NODShiLtJ_G0031878.1 mouse_genomes_project 7 32053152 32072536 + MGP_NODShiLtJ_P0082818 Scgb2b2 protein_coding protein_coding MGP_NODShiLtJ_T0082820.1 MGP_NODShiLtJ_G0031878.1 mouse_genomes_project 7 32067481 32072536 + MGP_NODShiLtJ_P0082820 Scgb2b2 protein_coding protein_coding MGP_NODShiLtJ_T0005146.1 MGP_NODShiLtJ_G0004377.1 mouse_genomes_project 7 37092001 37128943 + E130304I02Rik antisense antisense MGP_NODShiLtJ_T0005147.1 MGP_NODShiLtJ_G0004377.1 mouse_genomes_project 7 37092002 37092437 + E130304I02Rik antisense antisense MGP_NODShiLtJ_T0081153.1 MGP_NODShiLtJ_G0031412.1 mouse_genomes_project 7 3753271 3761379 + MGP_NODShiLtJ_P0081153 Zfp78 protein_coding protein_coding MGP_NODShiLtJ_T0081154.1 MGP_NODShiLtJ_G0031412.1 mouse_genomes_project 7 3753271 3761379 + MGP_NODShiLtJ_P0081154 Zfp78 protein_coding protein_coding MGP_NODShiLtJ_T0097827.1 MGP_NODShiLtJ_G0036239.1 mouse_genomes_project 7 103824228 103826060 + pseudogene pseudogene MGP_NODShiLtJ_T0081329.1 MGP_NODShiLtJ_G0031492.1 mouse_genomes_project 7 13182310 13185510 - MGP_NODShiLtJ_P0081329 Vmn1r90 protein_coding protein_coding MGP_NODShiLtJ_T0002148.1 MGP_NODShiLtJ_G0002060.1 mouse_genomes_project 7 451307 452729 - TEC TEC MGP_NODShiLtJ_T0010793.1 MGP_NODShiLtJ_G0008926.1 mouse_genomes_project 7 81218095 81218147 + Mir7234 miRNA miRNA MGP_NODShiLtJ_T0085605.1 MGP_NODShiLtJ_G0032685.1 mouse_genomes_project 7 127736355 127736841 - MGP_NODShiLtJ_P0085605 protein_coding protein_coding MGP_NODShiLtJ_T0083792.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60880365 60907658 - MGP_NODShiLtJ_P0083792 Nipa2 protein_coding protein_coding MGP_NODShiLtJ_T0083793.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60880365 60907621 - MGP_NODShiLtJ_P0083793 Nipa2 protein_coding protein_coding MGP_NODShiLtJ_T0083794.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60880365 60907427 - MGP_NODShiLtJ_P0083794 Nipa2 protein_coding protein_coding MGP_NODShiLtJ_T0083795.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60880365 60907632 - MGP_NODShiLtJ_P0083795 Nipa2 protein_coding protein_coding MGP_NODShiLtJ_T0083796.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60882327 60907574 - Nipa2 protein_coding processed_transcript MGP_NODShiLtJ_T0083797.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60885702 60907612 - MGP_NODShiLtJ_P0083797 Nipa2 protein_coding protein_coding MGP_NODShiLtJ_T0083798.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60885702 60907658 - MGP_NODShiLtJ_P0083798 Nipa2 protein_coding protein_coding MGP_NODShiLtJ_T0083799.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60893479 60907650 - Nipa2 protein_coding retained_intron MGP_NODShiLtJ_T0083800.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60893656 60896667 - Nipa2 protein_coding retained_intron MGP_NODShiLtJ_T0083801.1 MGP_NODShiLtJ_G0032131.1 mouse_genomes_project 7 60896329 60907355 - MGP_NODShiLtJ_P0083801 Nipa2 protein_coding protein_coding MGP_NODShiLtJ_T0082736.1 MGP_NODShiLtJ_G0031868.1 mouse_genomes_project 7 31706674 31722329 - MGP_NODShiLtJ_P0082736 Lsr protein_coding protein_coding MGP_NODShiLtJ_T0082737.1 MGP_NODShiLtJ_G0031868.1 mouse_genomes_project 7 31706679 31722367 - MGP_NODShiLtJ_P0082737 Lsr protein_coding protein_coding MGP_NODShiLtJ_T0082738.1 MGP_NODShiLtJ_G0031868.1 mouse_genomes_project 7 31706681 31722330 - MGP_NODShiLtJ_P0082738 Lsr protein_coding protein_coding MGP_NODShiLtJ_T0082739.1 MGP_NODShiLtJ_G0031868.1 mouse_genomes_project 7 31706683 31722225 - MGP_NODShiLtJ_P0082739 Lsr protein_coding protein_coding MGP_NODShiLtJ_T0082740.1 MGP_NODShiLtJ_G0031868.1 mouse_genomes_project 7 31707166 31722318 - MGP_NODShiLtJ_P0082740 Lsr protein_coding protein_coding MGP_NODShiLtJ_T0083651.1 MGP_NODShiLtJ_G0032090.1 mouse_genomes_project 7 49739034 49767809 + MGP_NODShiLtJ_P0083651 Gtf2h1 protein_coding protein_coding MGP_NODShiLtJ_T0083652.1 MGP_NODShiLtJ_G0032090.1 mouse_genomes_project 7 49739045 49749076 + MGP_NODShiLtJ_P0083652 Gtf2h1 protein_coding protein_coding MGP_NODShiLtJ_T0083653.1 MGP_NODShiLtJ_G0032090.1 mouse_genomes_project 7 49739602 49767284 + MGP_NODShiLtJ_P0083653 Gtf2h1 protein_coding protein_coding MGP_NODShiLtJ_T0083654.1 MGP_NODShiLtJ_G0032090.1 mouse_genomes_project 7 49745735 49766918 + MGP_NODShiLtJ_P0083654 Gtf2h1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083655.1 MGP_NODShiLtJ_G0032090.1 mouse_genomes_project 7 49752500 49759427 + Gtf2h1 protein_coding retained_intron MGP_NODShiLtJ_T0008902.1 MGP_NODShiLtJ_G0007170.1 mouse_genomes_project 7 122544384 122556676 - Gm26599 lincRNA lincRNA MGP_NODShiLtJ_T0087473.1 MGP_NODShiLtJ_G0033085.1 mouse_genomes_project 7 160225176 160245551 - MGP_NODShiLtJ_P0087473 Tnfrsf23 protein_coding protein_coding MGP_NODShiLtJ_T0082647.1 MGP_NODShiLtJ_G0031848.1 mouse_genomes_project 7 31279207 31289590 - MGP_NODShiLtJ_P0082647 Cox6b1 protein_coding protein_coding MGP_NODShiLtJ_T0085828.1 MGP_NODShiLtJ_G0032736.1 mouse_genomes_project 7 134979164 135014604 + Abca15 protein_coding retained_intron MGP_NODShiLtJ_T0085829.1 MGP_NODShiLtJ_G0032736.1 mouse_genomes_project 7 134979164 135063345 + MGP_NODShiLtJ_P0085829 Abca15 protein_coding protein_coding MGP_NODShiLtJ_T0085830.1 MGP_NODShiLtJ_G0032736.1 mouse_genomes_project 7 134979164 135063345 + MGP_NODShiLtJ_P0085830 Abca15 protein_coding protein_coding MGP_NODShiLtJ_T0008742.1 MGP_NODShiLtJ_G0007055.1 mouse_genomes_project 7 25804529 25815240 + Gm30146 lincRNA lincRNA MGP_NODShiLtJ_T0008809.1 MGP_NODShiLtJ_G0007108.1 mouse_genomes_project 7 72632468 72633040 - Gm45081 lincRNA lincRNA MGP_NODShiLtJ_T0102194.1 MGP_NODShiLtJ_G0040360.1 mouse_genomes_project 7 115363190 115364132 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087013.1 MGP_NODShiLtJ_G0032974.1 mouse_genomes_project 7 156313258 156317503 - MGP_NODShiLtJ_P0087013 Sprn protein_coding protein_coding MGP_NODShiLtJ_T0087014.1 MGP_NODShiLtJ_G0032974.1 mouse_genomes_project 7 156313594 156316172 - Sprn protein_coding processed_transcript MGP_NODShiLtJ_T0008827.1 MGP_NODShiLtJ_G0007121.1 mouse_genomes_project 7 79188800 79255029 + 1700011C11Rik lincRNA lincRNA MGP_NODShiLtJ_T0085220.1 MGP_NODShiLtJ_G0032536.1 mouse_genomes_project 7 117611273 117612327 - MGP_NODShiLtJ_P0085220 protein_coding protein_coding MGP_NODShiLtJ_T0081503.1 MGP_NODShiLtJ_G0031547.1 mouse_genomes_project 7 17770062 17782859 - MGP_NODShiLtJ_P0081503 protein_coding protein_coding MGP_NODShiLtJ_T0082120.1 MGP_NODShiLtJ_G0031724.1 mouse_genomes_project 7 27632396 27673609 - MGP_NODShiLtJ_P0082120 Sptbn4 protein_coding protein_coding MGP_NODShiLtJ_T0082121.1 MGP_NODShiLtJ_G0031724.1 mouse_genomes_project 7 27632396 27675558 - MGP_NODShiLtJ_P0082121 Sptbn4 protein_coding protein_coding MGP_NODShiLtJ_T0082122.1 MGP_NODShiLtJ_G0031724.1 mouse_genomes_project 7 27632396 27675303 - MGP_NODShiLtJ_P0082122 Sptbn4 protein_coding protein_coding MGP_NODShiLtJ_T0082123.1 MGP_NODShiLtJ_G0031724.1 mouse_genomes_project 7 27632396 27728530 - MGP_NODShiLtJ_P0082123 Sptbn4 protein_coding protein_coding MGP_NODShiLtJ_T0082124.1 MGP_NODShiLtJ_G0031724.1 mouse_genomes_project 7 27632400 27729617 - MGP_NODShiLtJ_P0082124 Sptbn4 protein_coding protein_coding MGP_NODShiLtJ_T0082125.1 MGP_NODShiLtJ_G0031724.1 mouse_genomes_project 7 27714597 27729617 - MGP_NODShiLtJ_P0082125 Sptbn4 protein_coding protein_coding MGP_NODShiLtJ_T0082126.1 MGP_NODShiLtJ_G0031724.1 mouse_genomes_project 7 27727884 27728448 - Sptbn4 protein_coding processed_transcript MGP_NODShiLtJ_T0098167.1 MGP_NODShiLtJ_G0036579.1 mouse_genomes_project 7 4171469 4171563 + Gm27675 sRNA sRNA MGP_NODShiLtJ_T0083003.1 MGP_NODShiLtJ_G0031917.1 mouse_genomes_project 7 39525471 39537017 - MGP_NODShiLtJ_P0083003 Ccne1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083004.1 MGP_NODShiLtJ_G0031917.1 mouse_genomes_project 7 39525475 39537145 - MGP_NODShiLtJ_P0083004 Ccne1 protein_coding protein_coding MGP_NODShiLtJ_T0083005.1 MGP_NODShiLtJ_G0031917.1 mouse_genomes_project 7 39526159 39526995 - Ccne1 protein_coding retained_intron MGP_NODShiLtJ_T0083006.1 MGP_NODShiLtJ_G0031917.1 mouse_genomes_project 7 39526305 39526863 - Ccne1 protein_coding processed_transcript MGP_NODShiLtJ_T0083007.1 MGP_NODShiLtJ_G0031917.1 mouse_genomes_project 7 39528144 39536510 - MGP_NODShiLtJ_P0083007 Ccne1 protein_coding protein_coding MGP_NODShiLtJ_T0083008.1 MGP_NODShiLtJ_G0031917.1 mouse_genomes_project 7 39532583 39537113 - MGP_NODShiLtJ_P0083008 Ccne1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002173.1 MGP_NODShiLtJ_G0002085.1 mouse_genomes_project 7 41784165 41787471 - TEC TEC MGP_NODShiLtJ_T0084500.1 MGP_NODShiLtJ_G0032275.1 mouse_genomes_project 7 93202321 93272599 - MGP_NODShiLtJ_P0084500 Zfand6 protein_coding protein_coding MGP_NODShiLtJ_T0084501.1 MGP_NODShiLtJ_G0032275.1 mouse_genomes_project 7 93202321 93272609 - MGP_NODShiLtJ_P0084501 Zfand6 protein_coding protein_coding MGP_NODShiLtJ_T0008948.1 MGP_NODShiLtJ_G0007196.1 mouse_genomes_project 7 142245024 142247608 + Gm44939 lincRNA lincRNA MGP_NODShiLtJ_T0084700.1 MGP_NODShiLtJ_G0032339.1 mouse_genomes_project 7 109478754 109548376 + Pak1 protein_coding retained_intron MGP_NODShiLtJ_T0084701.1 MGP_NODShiLtJ_G0032339.1 mouse_genomes_project 7 109478754 109633616 + MGP_NODShiLtJ_P0084701 Pak1 protein_coding protein_coding MGP_NODShiLtJ_T0084702.1 MGP_NODShiLtJ_G0032339.1 mouse_genomes_project 7 109522329 109571958 + MGP_NODShiLtJ_P0084702 Pak1 protein_coding protein_coding MGP_NODShiLtJ_T0084703.1 MGP_NODShiLtJ_G0032339.1 mouse_genomes_project 7 109535832 109634114 + MGP_NODShiLtJ_P0084703 Pak1 protein_coding protein_coding MGP_NODShiLtJ_T0084704.1 MGP_NODShiLtJ_G0032339.1 mouse_genomes_project 7 109535832 109634114 + MGP_NODShiLtJ_P0084704 Pak1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084705.1 MGP_NODShiLtJ_G0032339.1 mouse_genomes_project 7 109617251 109633015 + Pak1 protein_coding retained_intron MGP_NODShiLtJ_T0015801.1 MGP_NODShiLtJ_G0013909.1 mouse_genomes_project 7 142623078 142623366 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102091.1 MGP_NODShiLtJ_G0040258.1 mouse_genomes_project 7 13190422 13190900 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015765.1 MGP_NODShiLtJ_G0013873.1 mouse_genomes_project 7 113229651 113231652 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081285.1 MGP_NODShiLtJ_G0031476.1 mouse_genomes_project 7 11496528 11497479 + MGP_NODShiLtJ_P0081285 Vmn1r89 protein_coding protein_coding MGP_NODShiLtJ_T0102161.1 MGP_NODShiLtJ_G0040327.1 mouse_genomes_project 7 52368668 52369452 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086017.1 MGP_NODShiLtJ_G0032779.1 mouse_genomes_project 7 140776028 140785926 + D430042O09Rik protein_coding retained_intron MGP_NODShiLtJ_T0086018.1 MGP_NODShiLtJ_G0032779.1 mouse_genomes_project 7 140776053 140948035 + MGP_NODShiLtJ_P0086018 D430042O09Rik protein_coding protein_coding MGP_NODShiLtJ_T0086019.1 MGP_NODShiLtJ_G0032779.1 mouse_genomes_project 7 140776102 140830647 + MGP_NODShiLtJ_P0086019 D430042O09Rik protein_coding protein_coding MGP_NODShiLtJ_T0086020.1 MGP_NODShiLtJ_G0032779.1 mouse_genomes_project 7 140856225 140935236 + D430042O09Rik protein_coding processed_transcript MGP_NODShiLtJ_T0086021.1 MGP_NODShiLtJ_G0032779.1 mouse_genomes_project 7 140902755 140948028 + D430042O09Rik protein_coding retained_intron MGP_NODShiLtJ_T0086022.1 MGP_NODShiLtJ_G0032779.1 mouse_genomes_project 7 140933917 140945481 + MGP_NODShiLtJ_P0086022 D430042O09Rik protein_coding protein_coding MGP_NODShiLtJ_T0086023.1 MGP_NODShiLtJ_G0032779.1 mouse_genomes_project 7 140938506 140941210 + D430042O09Rik protein_coding retained_intron MGP_NODShiLtJ_T0018255.1 MGP_NODShiLtJ_G0015556.1 mouse_genomes_project 7 142056050 142061661 + Gm20650 processed_transcript processed_transcript MGP_NODShiLtJ_T0010716.1 MGP_NODShiLtJ_G0008849.1 mouse_genomes_project 7 131842 131925 + Mir290a miRNA miRNA MGP_NODShiLtJ_T0008849.1 MGP_NODShiLtJ_G0007139.1 mouse_genomes_project 7 82524616 82574216 + Gm44904 lincRNA lincRNA MGP_NODShiLtJ_T0102150.1 MGP_NODShiLtJ_G0040316.1 mouse_genomes_project 7 51599317 51600144 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082580.1 MGP_NODShiLtJ_G0031838.1 mouse_genomes_project 7 31180249 31192997 - MGP_NODShiLtJ_P0082580 Arhgap33 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084405.1 MGP_NODShiLtJ_G0032246.1 mouse_genomes_project 7 89761002 89765899 - Ap3b2 protein_coding retained_intron MGP_NODShiLtJ_T0084406.1 MGP_NODShiLtJ_G0032246.1 mouse_genomes_project 7 89761004 89796410 - MGP_NODShiLtJ_P0084406 Ap3b2 protein_coding protein_coding MGP_NODShiLtJ_T0084407.1 MGP_NODShiLtJ_G0032246.1 mouse_genomes_project 7 89774989 89796191 - Ap3b2 protein_coding retained_intron MGP_NODShiLtJ_T0084408.1 MGP_NODShiLtJ_G0032246.1 mouse_genomes_project 7 89777741 89779029 - Ap3b2 protein_coding processed_transcript MGP_NODShiLtJ_T0084409.1 MGP_NODShiLtJ_G0032246.1 mouse_genomes_project 7 89780267 89796268 - MGP_NODShiLtJ_P0084409 Ap3b2 protein_coding protein_coding MGP_NODShiLtJ_T0015552.1 MGP_NODShiLtJ_G0013660.1 mouse_genomes_project 7 906742 907616 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099503.1 MGP_NODShiLtJ_G0037897.1 mouse_genomes_project 7 106945125 106945232 - Gm25684 snRNA snRNA MGP_NODShiLtJ_T0082465.1 MGP_NODShiLtJ_G0031811.1 mouse_genomes_project 7 30661227 30664509 - Zfp82 protein_coding retained_intron MGP_NODShiLtJ_T0082466.1 MGP_NODShiLtJ_G0031811.1 mouse_genomes_project 7 30662773 30681492 - MGP_NODShiLtJ_P0082466 Zfp82 protein_coding protein_coding MGP_NODShiLtJ_T0082468.1 MGP_NODShiLtJ_G0031811.1 mouse_genomes_project 7 30662780 30668341 - Zfp82 protein_coding retained_intron MGP_NODShiLtJ_T0082469.1 MGP_NODShiLtJ_G0031811.1 mouse_genomes_project 7 30662782 30680732 - MGP_NODShiLtJ_P0082469 Zfp82 protein_coding protein_coding MGP_NODShiLtJ_T0082470.1 MGP_NODShiLtJ_G0031811.1 mouse_genomes_project 7 30664015 30681400 - MGP_NODShiLtJ_P0082470 Zfp82 protein_coding protein_coding MGP_NODShiLtJ_T0082471.1 MGP_NODShiLtJ_G0031811.1 mouse_genomes_project 7 30665985 30681418 - MGP_NODShiLtJ_P0082471 Zfp82 protein_coding protein_coding MGP_NODShiLtJ_T0102063.1 MGP_NODShiLtJ_G0040230.1 mouse_genomes_project 7 8516633 8516953 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085529.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124819348 124848459 + MGP_NODShiLtJ_P0085529 Ctr9 protein_coding protein_coding MGP_NODShiLtJ_T0085530.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124819392 124838061 + Ctr9 protein_coding retained_intron MGP_NODShiLtJ_T0085531.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124819410 124821207 + Ctr9 protein_coding retained_intron MGP_NODShiLtJ_T0085532.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124819534 124848465 + MGP_NODShiLtJ_P0085532 Ctr9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085533.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124820612 124824454 + Ctr9 protein_coding processed_transcript MGP_NODShiLtJ_T0085534.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124824433 124825790 + Ctr9 protein_coding retained_intron MGP_NODShiLtJ_T0085535.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124836719 124837232 + Ctr9 protein_coding retained_intron MGP_NODShiLtJ_T0085536.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124836719 124838399 + Ctr9 protein_coding retained_intron MGP_NODShiLtJ_T0085537.1 MGP_NODShiLtJ_G0032671.1 mouse_genomes_project 7 124841412 124844452 + Ctr9 protein_coding processed_transcript MGP_NODShiLtJ_T0082272.1 MGP_NODShiLtJ_G0031767.1 mouse_genomes_project 7 28989817 28994141 - MGP_NODShiLtJ_P0082272 Nccrp1 protein_coding protein_coding MGP_NODShiLtJ_T0102126.1 MGP_NODShiLtJ_G0040292.1 mouse_genomes_project 7 43774668 43774908 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085250.1 MGP_NODShiLtJ_G0032559.1 mouse_genomes_project 7 118377762 118427916 + MGP_NODShiLtJ_P0085250 Cckbr protein_coding protein_coding MGP_NODShiLtJ_T0085251.1 MGP_NODShiLtJ_G0032559.1 mouse_genomes_project 7 118377765 118389078 + MGP_NODShiLtJ_P0085251 Cckbr protein_coding protein_coding MGP_NODShiLtJ_T0084496.1 MGP_NODShiLtJ_G0032274.1 mouse_genomes_project 7 93172047 93193139 - MGP_NODShiLtJ_P0084496 Fah protein_coding protein_coding MGP_NODShiLtJ_T0084497.1 MGP_NODShiLtJ_G0032274.1 mouse_genomes_project 7 93182397 93194037 - MGP_NODShiLtJ_P0084497 Fah protein_coding protein_coding MGP_NODShiLtJ_T0084498.1 MGP_NODShiLtJ_G0032274.1 mouse_genomes_project 7 93187939 93188963 - Fah protein_coding processed_transcript MGP_NODShiLtJ_T0084499.1 MGP_NODShiLtJ_G0032274.1 mouse_genomes_project 7 93188483 93193041 - Fah protein_coding retained_intron MGP_NODShiLtJ_T0010776.1 MGP_NODShiLtJ_G0008909.1 mouse_genomes_project 7 67729522 67729602 - Mir344d-3 miRNA miRNA MGP_NODShiLtJ_T0084091.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86186668 86607258 - MGP_NODShiLtJ_P0084091 Ntrk3 protein_coding protein_coding MGP_NODShiLtJ_T0084092.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86194226 86206095 - MGP_NODShiLtJ_P0084092 Ntrk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084093.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86205731 86606633 - MGP_NODShiLtJ_P0084093 Ntrk3 protein_coding protein_coding MGP_NODShiLtJ_T0084094.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86205758 86606639 - MGP_NODShiLtJ_P0084094 Ntrk3 protein_coding protein_coding MGP_NODShiLtJ_T0084095.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86266363 86282290 - MGP_NODShiLtJ_P0084095 Ntrk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084096.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86322099 86606832 - MGP_NODShiLtJ_P0084096 Ntrk3 protein_coding protein_coding MGP_NODShiLtJ_T0084097.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86323732 86402016 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084098.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86324040 86378349 - MGP_NODShiLtJ_P0084098 Ntrk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084099.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86378310 86476332 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084100.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86473834 86606825 - Ntrk3 protein_coding retained_intron MGP_NODShiLtJ_T0084101.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86502963 86600739 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084102.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86542791 86654845 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084103.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86543525 86607253 - MGP_NODShiLtJ_P0084103 Ntrk3 protein_coding protein_coding MGP_NODShiLtJ_T0084104.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86606385 86690911 - MGP_NODShiLtJ_P0084104 Ntrk3 protein_coding protein_coding MGP_NODShiLtJ_T0084105.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86606655 86607560 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084106.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86609927 86757230 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084107.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86616238 86777031 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084108.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86624533 86691296 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084109.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86765717 86777033 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0084110.1 MGP_NODShiLtJ_G0032194.1 mouse_genomes_project 7 86769499 86777033 - Ntrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0082383.1 MGP_NODShiLtJ_G0031789.1 mouse_genomes_project 7 29694276 29697990 + MGP_NODShiLtJ_P0082383 Ggn protein_coding protein_coding MGP_NODShiLtJ_T0082384.1 MGP_NODShiLtJ_G0031789.1 mouse_genomes_project 7 29694446 29697969 + MGP_NODShiLtJ_P0082384 Ggn protein_coding protein_coding MGP_NODShiLtJ_T0085351.1 MGP_NODShiLtJ_G0032579.1 mouse_genomes_project 7 119947778 119948714 - MGP_NODShiLtJ_P0085351 Olfr698 protein_coding protein_coding MGP_NODShiLtJ_T0015672.1 MGP_NODShiLtJ_G0013780.1 mouse_genomes_project 7 44804814 44805296 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015570.1 MGP_NODShiLtJ_G0013678.1 mouse_genomes_project 7 3791473 3791683 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083844.1 MGP_NODShiLtJ_G0032143.1 mouse_genomes_project 7 68556087 68557739 + MGP_NODShiLtJ_P0083844 Ndn protein_coding protein_coding MGP_NODShiLtJ_T0018248.1 MGP_NODShiLtJ_G0015553.1 mouse_genomes_project 7 132701437 132703124 + 4930583K01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099470.1 MGP_NODShiLtJ_G0037864.1 mouse_genomes_project 7 1866905 1867007 + Gm24537 snRNA snRNA MGP_NODShiLtJ_T0086598.1 MGP_NODShiLtJ_G0032883.1 mouse_genomes_project 7 143550126 143553696 - MGP_NODShiLtJ_P0086598 9130023H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0084129.1 MGP_NODShiLtJ_G0032199.1 mouse_genomes_project 7 86966414 86973208 + MGP_NODShiLtJ_P0084129 Isg20 protein_coding protein_coding MGP_NODShiLtJ_T0084130.1 MGP_NODShiLtJ_G0032199.1 mouse_genomes_project 7 86966448 86973298 + MGP_NODShiLtJ_P0084130 Isg20 protein_coding protein_coding MGP_NODShiLtJ_T0084131.1 MGP_NODShiLtJ_G0032199.1 mouse_genomes_project 7 86966755 86973391 + MGP_NODShiLtJ_P0084131 Isg20 protein_coding protein_coding MGP_NODShiLtJ_T0084132.1 MGP_NODShiLtJ_G0032199.1 mouse_genomes_project 7 86966971 86970009 + Isg20 protein_coding retained_intron MGP_NODShiLtJ_T0084133.1 MGP_NODShiLtJ_G0032199.1 mouse_genomes_project 7 86967225 86973343 + MGP_NODShiLtJ_P0084133 Isg20 protein_coding protein_coding MGP_NODShiLtJ_T0084134.1 MGP_NODShiLtJ_G0032199.1 mouse_genomes_project 7 86967319 86973178 + MGP_NODShiLtJ_P0084134 Isg20 protein_coding protein_coding MGP_NODShiLtJ_T0083445.1 MGP_NODShiLtJ_G0032036.1 mouse_genomes_project 7 48222367 48225845 + MGP_NODShiLtJ_P0083445 Ntf5 protein_coding protein_coding MGP_NODShiLtJ_T0005197.1 MGP_NODShiLtJ_G0004410.1 mouse_genomes_project 7 107929745 107932227 - Gm15412 antisense antisense MGP_NODShiLtJ_T0015575.1 MGP_NODShiLtJ_G0013683.1 mouse_genomes_project 7 11739530 11740320 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0080884.1 MGP_NODShiLtJ_G0031340.1 mouse_genomes_project 7 619852 621796 + MGP_NODShiLtJ_P0080884 protein_coding protein_coding MGP_NODShiLtJ_T0080885.1 MGP_NODShiLtJ_G0031340.1 mouse_genomes_project 7 620359 629194 + MGP_NODShiLtJ_P0080885 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0080886.1 MGP_NODShiLtJ_G0031340.1 mouse_genomes_project 7 620591 622659 + MGP_NODShiLtJ_P0080886 protein_coding protein_coding MGP_NODShiLtJ_T0080887.1 MGP_NODShiLtJ_G0031340.1 mouse_genomes_project 7 620790 622615 + protein_coding retained_intron MGP_NODShiLtJ_T0080888.1 MGP_NODShiLtJ_G0031340.1 mouse_genomes_project 7 620818 622199 + MGP_NODShiLtJ_P0080888 protein_coding protein_coding MGP_NODShiLtJ_T0080889.1 MGP_NODShiLtJ_G0031340.1 mouse_genomes_project 7 622178 627438 + MGP_NODShiLtJ_P0080889 protein_coding protein_coding MGP_NODShiLtJ_T0085372.1 MGP_NODShiLtJ_G0032599.1 mouse_genomes_project 7 120397523 120398471 - MGP_NODShiLtJ_P0085372 protein_coding protein_coding MGP_NODShiLtJ_T0100729.1 MGP_NODShiLtJ_G0039123.1 mouse_genomes_project 7 28765760 28765885 + AF357399 snoRNA snoRNA MGP_NODShiLtJ_T0015646.1 MGP_NODShiLtJ_G0013754.1 mouse_genomes_project 7 34941831 34941898 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081732.1 MGP_NODShiLtJ_G0031618.1 mouse_genomes_project 7 23085584 23086706 - MGP_NODShiLtJ_P0081732 protein_coding protein_coding MGP_NODShiLtJ_T0085133.1 MGP_NODShiLtJ_G0032474.1 mouse_genomes_project 7 115863687 115864629 + MGP_NODShiLtJ_P0085133 Olfr615 protein_coding protein_coding MGP_NODShiLtJ_T0084520.1 MGP_NODShiLtJ_G0032293.1 mouse_genomes_project 7 96244591 96257734 + MGP_NODShiLtJ_P0084520 Olfr292 protein_coding protein_coding MGP_NODShiLtJ_T0083724.1 MGP_NODShiLtJ_G0032116.1 mouse_genomes_project 7 53623715 53638608 + MGP_NODShiLtJ_P0083724 Htatip2 protein_coding protein_coding MGP_NODShiLtJ_T0083725.1 MGP_NODShiLtJ_G0032116.1 mouse_genomes_project 7 53623762 53638612 + MGP_NODShiLtJ_P0083725 Htatip2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081631.1 MGP_NODShiLtJ_G0031583.1 mouse_genomes_project 7 18785697 18794989 - MGP_NODShiLtJ_P0081631 Klc3 protein_coding protein_coding MGP_NODShiLtJ_T0081632.1 MGP_NODShiLtJ_G0031583.1 mouse_genomes_project 7 18785700 18790797 - MGP_NODShiLtJ_P0081632 Klc3 protein_coding protein_coding MGP_NODShiLtJ_T0081633.1 MGP_NODShiLtJ_G0031583.1 mouse_genomes_project 7 18785700 18790754 - MGP_NODShiLtJ_P0081633 Klc3 protein_coding protein_coding MGP_NODShiLtJ_T0081634.1 MGP_NODShiLtJ_G0031583.1 mouse_genomes_project 7 18785761 18787243 - Klc3 protein_coding retained_intron MGP_NODShiLtJ_T0081635.1 MGP_NODShiLtJ_G0031583.1 mouse_genomes_project 7 18785824 18790424 - MGP_NODShiLtJ_P0081635 Klc3 protein_coding protein_coding MGP_NODShiLtJ_T0081636.1 MGP_NODShiLtJ_G0031583.1 mouse_genomes_project 7 18786614 18787837 - Klc3 protein_coding retained_intron MGP_NODShiLtJ_T0081637.1 MGP_NODShiLtJ_G0031583.1 mouse_genomes_project 7 18786973 18794710 - MGP_NODShiLtJ_P0081637 Klc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085213.1 MGP_NODShiLtJ_G0032530.1 mouse_genomes_project 7 117276291 117278214 + MGP_NODShiLtJ_P0085213 Usp17la protein_coding protein_coding MGP_NODShiLtJ_T0085414.1 MGP_NODShiLtJ_G0032634.1 mouse_genomes_project 7 122199704 122200779 - MGP_NODShiLtJ_P0085414 Olfr509 protein_coding protein_coding MGP_NODShiLtJ_T0083609.1 MGP_NODShiLtJ_G0032080.1 mouse_genomes_project 7 49291345 49295071 + MGP_NODShiLtJ_P0083609 Myod1 protein_coding protein_coding MGP_NODShiLtJ_T0005230.1 MGP_NODShiLtJ_G0004432.1 mouse_genomes_project 7 138934295 138947798 - Gm27040 antisense antisense MGP_NODShiLtJ_T0087134.1 MGP_NODShiLtJ_G0033024.1 mouse_genomes_project 7 157536100 157538899 + MGP_NODShiLtJ_P0087134 Rassf7 protein_coding protein_coding MGP_NODShiLtJ_T0087135.1 MGP_NODShiLtJ_G0033024.1 mouse_genomes_project 7 157536115 157538241 + Rassf7 protein_coding processed_transcript MGP_NODShiLtJ_T0087136.1 MGP_NODShiLtJ_G0033024.1 mouse_genomes_project 7 157536139 157537754 + Rassf7 protein_coding processed_transcript MGP_NODShiLtJ_T0087137.1 MGP_NODShiLtJ_G0033024.1 mouse_genomes_project 7 157536218 157537719 + MGP_NODShiLtJ_P0087137 Rassf7 protein_coding protein_coding MGP_NODShiLtJ_T0087138.1 MGP_NODShiLtJ_G0033024.1 mouse_genomes_project 7 157536443 157537713 + MGP_NODShiLtJ_P0087138 Rassf7 protein_coding protein_coding MGP_NODShiLtJ_T0087139.1 MGP_NODShiLtJ_G0033024.1 mouse_genomes_project 7 157536875 157537846 + MGP_NODShiLtJ_P0087139 Rassf7 protein_coding protein_coding MGP_NODShiLtJ_T0087140.1 MGP_NODShiLtJ_G0033024.1 mouse_genomes_project 7 157536940 157537954 + MGP_NODShiLtJ_P0087140 Rassf7 protein_coding protein_coding MGP_NODShiLtJ_T0081593.1 MGP_NODShiLtJ_G0031575.1 mouse_genomes_project 7 18630329 18648055 - MGP_NODShiLtJ_P0081593 Vasp protein_coding protein_coding MGP_NODShiLtJ_T0081594.1 MGP_NODShiLtJ_G0031575.1 mouse_genomes_project 7 18630984 18631532 - Vasp protein_coding retained_intron MGP_NODShiLtJ_T0081595.1 MGP_NODShiLtJ_G0031575.1 mouse_genomes_project 7 18634064 18634480 - Vasp protein_coding processed_transcript MGP_NODShiLtJ_T0081596.1 MGP_NODShiLtJ_G0031575.1 mouse_genomes_project 7 18634265 18641547 - Vasp protein_coding processed_transcript MGP_NODShiLtJ_T0083339.1 MGP_NODShiLtJ_G0032003.1 mouse_genomes_project 7 47663031 47693023 - MGP_NODShiLtJ_P0083339 Ap2a1 protein_coding protein_coding MGP_NODShiLtJ_T0083340.1 MGP_NODShiLtJ_G0032003.1 mouse_genomes_project 7 47663031 47693023 - MGP_NODShiLtJ_P0083340 Ap2a1 protein_coding protein_coding MGP_NODShiLtJ_T0083341.1 MGP_NODShiLtJ_G0032003.1 mouse_genomes_project 7 47663031 47693023 - MGP_NODShiLtJ_P0083341 Ap2a1 protein_coding protein_coding MGP_NODShiLtJ_T0083342.1 MGP_NODShiLtJ_G0032003.1 mouse_genomes_project 7 47663031 47693023 - MGP_NODShiLtJ_P0083342 Ap2a1 protein_coding protein_coding MGP_NODShiLtJ_T0015594.1 MGP_NODShiLtJ_G0013702.1 mouse_genomes_project 7 16095474 16096076 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087083.1 MGP_NODShiLtJ_G0033008.1 mouse_genomes_project 7 157215405 157221671 + MGP_NODShiLtJ_P0087083 Athl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087084.1 MGP_NODShiLtJ_G0033008.1 mouse_genomes_project 7 157215580 157221673 + Athl1 protein_coding retained_intron MGP_NODShiLtJ_T0087085.1 MGP_NODShiLtJ_G0033008.1 mouse_genomes_project 7 157215585 157217127 + Athl1 protein_coding processed_transcript MGP_NODShiLtJ_T0087086.1 MGP_NODShiLtJ_G0033008.1 mouse_genomes_project 7 157215595 157221679 + MGP_NODShiLtJ_P0087086 Athl1 protein_coding protein_coding MGP_NODShiLtJ_T0087087.1 MGP_NODShiLtJ_G0033008.1 mouse_genomes_project 7 157216324 157220859 + MGP_NODShiLtJ_P0087087 Athl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087088.1 MGP_NODShiLtJ_G0033008.1 mouse_genomes_project 7 157216550 157221675 + MGP_NODShiLtJ_P0087088 Athl1 protein_coding protein_coding MGP_NODShiLtJ_T0010788.1 MGP_NODShiLtJ_G0008921.1 mouse_genomes_project 7 68223490 68223578 - Mir344i miRNA miRNA MGP_NODShiLtJ_T0085757.1 MGP_NODShiLtJ_G0032714.1 mouse_genomes_project 7 133363863 133419704 + Iqck protein_coding retained_intron MGP_NODShiLtJ_T0085758.1 MGP_NODShiLtJ_G0032714.1 mouse_genomes_project 7 133363878 133494535 + MGP_NODShiLtJ_P0085758 Iqck protein_coding protein_coding MGP_NODShiLtJ_T0085759.1 MGP_NODShiLtJ_G0032714.1 mouse_genomes_project 7 133363878 133495067 + MGP_NODShiLtJ_P0085759 Iqck protein_coding protein_coding MGP_NODShiLtJ_T0085760.1 MGP_NODShiLtJ_G0032714.1 mouse_genomes_project 7 133363878 133494703 + MGP_NODShiLtJ_P0085760 Iqck protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085761.1 MGP_NODShiLtJ_G0032714.1 mouse_genomes_project 7 133459160 133494181 + Iqck protein_coding processed_transcript MGP_NODShiLtJ_T0015793.1 MGP_NODShiLtJ_G0013901.1 mouse_genomes_project 7 141262348 141262759 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081390.1 MGP_NODShiLtJ_G0031512.1 mouse_genomes_project 7 15134198 15137144 - MGP_NODShiLtJ_P0081390 Inafm1 protein_coding protein_coding MGP_NODShiLtJ_T0083129.1 MGP_NODShiLtJ_G0031959.1 mouse_genomes_project 7 46343113 46358067 + MGP_NODShiLtJ_P0083129 Klk13 protein_coding protein_coding MGP_NODShiLtJ_T0083130.1 MGP_NODShiLtJ_G0031959.1 mouse_genomes_project 7 46343945 46351844 + MGP_NODShiLtJ_P0083130 Klk13 protein_coding protein_coding MGP_NODShiLtJ_T0083131.1 MGP_NODShiLtJ_G0031959.1 mouse_genomes_project 7 46345505 46354400 + MGP_NODShiLtJ_P0083131 Klk13 protein_coding protein_coding MGP_NODShiLtJ_T0085425.1 MGP_NODShiLtJ_G0032644.1 mouse_genomes_project 7 122526461 122536862 + MGP_NODShiLtJ_P0085425 Eif3f protein_coding protein_coding MGP_NODShiLtJ_T0085426.1 MGP_NODShiLtJ_G0032644.1 mouse_genomes_project 7 122532294 122534386 + Eif3f protein_coding retained_intron MGP_NODShiLtJ_T0085427.1 MGP_NODShiLtJ_G0032644.1 mouse_genomes_project 7 122534224 122534918 + Eif3f protein_coding retained_intron MGP_NODShiLtJ_T0085141.1 MGP_NODShiLtJ_G0032482.1 mouse_genomes_project 7 116064631 116065589 + MGP_NODShiLtJ_P0085141 protein_coding protein_coding MGP_NODShiLtJ_T0085142.1 MGP_NODShiLtJ_G0032482.1 mouse_genomes_project 7 116064664 116065580 + MGP_NODShiLtJ_P0085142 protein_coding protein_coding MGP_NODShiLtJ_T0102164.1 MGP_NODShiLtJ_G0040330.1 mouse_genomes_project 7 93412021 93413036 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083023.1 MGP_NODShiLtJ_G0031921.1 mouse_genomes_project 7 41065562 41075929 - MGP_NODShiLtJ_P0083023 Gm5591 protein_coding protein_coding MGP_NODShiLtJ_T0084445.1 MGP_NODShiLtJ_G0032258.1 mouse_genomes_project 7 90696872 90701203 + Adamtsl3 protein_coding processed_transcript MGP_NODShiLtJ_T0084446.1 MGP_NODShiLtJ_G0032258.1 mouse_genomes_project 7 90696910 91005770 + MGP_NODShiLtJ_P0084446 Adamtsl3 protein_coding protein_coding MGP_NODShiLtJ_T0084447.1 MGP_NODShiLtJ_G0032258.1 mouse_genomes_project 7 90698395 91003745 + MGP_NODShiLtJ_P0084447 Adamtsl3 protein_coding protein_coding MGP_NODShiLtJ_T0084448.1 MGP_NODShiLtJ_G0032258.1 mouse_genomes_project 7 90774593 90844461 + Adamtsl3 protein_coding retained_intron MGP_NODShiLtJ_T0084449.1 MGP_NODShiLtJ_G0032258.1 mouse_genomes_project 7 91003091 91004096 + MGP_NODShiLtJ_P0084449 Adamtsl3 protein_coding protein_coding MGP_NODShiLtJ_T0005095.1 MGP_NODShiLtJ_G0004339.1 mouse_genomes_project 7 15500681 15520685 + Gm29443 antisense antisense MGP_NODShiLtJ_T0005096.1 MGP_NODShiLtJ_G0004339.1 mouse_genomes_project 7 15500897 15520784 + Gm29443 antisense antisense MGP_NODShiLtJ_T0085964.1 MGP_NODShiLtJ_G0032768.1 mouse_genomes_project 7 138126765 138182437 + MGP_NODShiLtJ_P0085964 protein_coding protein_coding MGP_NODShiLtJ_T0085965.1 MGP_NODShiLtJ_G0032768.1 mouse_genomes_project 7 138126796 138143087 + protein_coding processed_transcript MGP_NODShiLtJ_T0085966.1 MGP_NODShiLtJ_G0032768.1 mouse_genomes_project 7 138142986 138155055 + MGP_NODShiLtJ_P0085966 protein_coding protein_coding MGP_NODShiLtJ_T0085967.1 MGP_NODShiLtJ_G0032768.1 mouse_genomes_project 7 138142986 138164876 + MGP_NODShiLtJ_P0085967 protein_coding protein_coding MGP_NODShiLtJ_T0085968.1 MGP_NODShiLtJ_G0032768.1 mouse_genomes_project 7 138143084 138198241 + MGP_NODShiLtJ_P0085968 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085969.1 MGP_NODShiLtJ_G0032768.1 mouse_genomes_project 7 138155951 138166805 + MGP_NODShiLtJ_P0085969 protein_coding protein_coding MGP_NODShiLtJ_T0085970.1 MGP_NODShiLtJ_G0032768.1 mouse_genomes_project 7 138181945 138184558 + protein_coding processed_transcript MGP_NODShiLtJ_T0083699.1 MGP_NODShiLtJ_G0032112.1 mouse_genomes_project 7 52601838 52619464 - MGP_NODShiLtJ_P0083699 Csrp3 protein_coding protein_coding MGP_NODShiLtJ_T0083700.1 MGP_NODShiLtJ_G0032112.1 mouse_genomes_project 7 52601838 52615084 - MGP_NODShiLtJ_P0083700 Csrp3 protein_coding protein_coding MGP_NODShiLtJ_T0086231.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142010553 142012663 + MGP_NODShiLtJ_P0086231 Doc2a protein_coding protein_coding MGP_NODShiLtJ_T0086232.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142010690 142015843 + MGP_NODShiLtJ_P0086232 Doc2a protein_coding protein_coding MGP_NODShiLtJ_T0086233.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142010775 142011890 + Doc2a protein_coding processed_transcript MGP_NODShiLtJ_T0086234.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142010835 142011830 + MGP_NODShiLtJ_P0086234 Doc2a protein_coding protein_coding MGP_NODShiLtJ_T0086235.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142010863 142014477 + MGP_NODShiLtJ_P0086235 Doc2a protein_coding protein_coding MGP_NODShiLtJ_T0086236.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142011064 142011974 + MGP_NODShiLtJ_P0086236 Doc2a protein_coding protein_coding MGP_NODShiLtJ_T0086237.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142011099 142011973 + MGP_NODShiLtJ_P0086237 Doc2a protein_coding protein_coding MGP_NODShiLtJ_T0086238.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142011392 142012898 + MGP_NODShiLtJ_P0086238 Doc2a protein_coding protein_coding MGP_NODShiLtJ_T0086239.1 MGP_NODShiLtJ_G0032811.1 mouse_genomes_project 7 142011934 142015174 + MGP_NODShiLtJ_P0086239 Doc2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086478.1 MGP_NODShiLtJ_G0032858.1 mouse_genomes_project 7 142973761 142989410 - MGP_NODShiLtJ_P0086478 Ctf2 protein_coding protein_coding MGP_NODShiLtJ_T0086479.1 MGP_NODShiLtJ_G0032858.1 mouse_genomes_project 7 142973761 142981461 - MGP_NODShiLtJ_P0086479 Ctf2 protein_coding protein_coding MGP_NODShiLtJ_T0010725.1 MGP_NODShiLtJ_G0008858.1 mouse_genomes_project 7 364664 364755 + Gm23450 miRNA miRNA MGP_NODShiLtJ_T0010795.1 MGP_NODShiLtJ_G0008928.1 mouse_genomes_project 7 86016804 86016898 - Gm44358 miRNA miRNA MGP_NODShiLtJ_T0084196.1 MGP_NODShiLtJ_G0032209.1 mouse_genomes_project 7 87812851 87830364 - MGP_NODShiLtJ_P0084196 Kif7 protein_coding protein_coding MGP_NODShiLtJ_T0084197.1 MGP_NODShiLtJ_G0032209.1 mouse_genomes_project 7 87812852 87828929 - MGP_NODShiLtJ_P0084197 Kif7 protein_coding protein_coding MGP_NODShiLtJ_T0084198.1 MGP_NODShiLtJ_G0032209.1 mouse_genomes_project 7 87812852 87828929 - MGP_NODShiLtJ_P0084198 Kif7 protein_coding protein_coding MGP_NODShiLtJ_T0084199.1 MGP_NODShiLtJ_G0032209.1 mouse_genomes_project 7 87813272 87830313 - MGP_NODShiLtJ_P0084199 Kif7 protein_coding protein_coding MGP_NODShiLtJ_T0015650.1 MGP_NODShiLtJ_G0013758.1 mouse_genomes_project 7 35527877 35528293 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084161.1 MGP_NODShiLtJ_G0032205.1 mouse_genomes_project 7 87490039 87500707 + MGP_NODShiLtJ_P0084161 Fanci protein_coding protein_coding MGP_NODShiLtJ_T0084162.1 MGP_NODShiLtJ_G0032205.1 mouse_genomes_project 7 87490426 87508405 + MGP_NODShiLtJ_P0084162 Fanci protein_coding protein_coding MGP_NODShiLtJ_T0084163.1 MGP_NODShiLtJ_G0032205.1 mouse_genomes_project 7 87490430 87551963 + MGP_NODShiLtJ_P0084163 Fanci protein_coding protein_coding MGP_NODShiLtJ_T0084164.1 MGP_NODShiLtJ_G0032205.1 mouse_genomes_project 7 87490471 87551963 + MGP_NODShiLtJ_P0084164 Fanci protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084165.1 MGP_NODShiLtJ_G0032205.1 mouse_genomes_project 7 87497958 87535032 + MGP_NODShiLtJ_P0084165 Fanci protein_coding protein_coding MGP_NODShiLtJ_T0084166.1 MGP_NODShiLtJ_G0032205.1 mouse_genomes_project 7 87512078 87526577 + MGP_NODShiLtJ_P0084166 Fanci protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084167.1 MGP_NODShiLtJ_G0032205.1 mouse_genomes_project 7 87540022 87547425 + MGP_NODShiLtJ_P0084167 Fanci protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086722.1 MGP_NODShiLtJ_G0032901.1 mouse_genomes_project 7 146277242 146331979 + MGP_NODShiLtJ_P0086722 Btbd16 protein_coding protein_coding MGP_NODShiLtJ_T0083381.1 MGP_NODShiLtJ_G0032023.1 mouse_genomes_project 7 47960836 47963957 - MGP_NODShiLtJ_P0083381 Gfy protein_coding protein_coding MGP_NODShiLtJ_T0081077.1 MGP_NODShiLtJ_G0031377.1 mouse_genomes_project 7 1994821 2027225 - MGP_NODShiLtJ_P0081077 Isoc2b protein_coding protein_coding MGP_NODShiLtJ_T0085162.1 MGP_NODShiLtJ_G0032501.1 mouse_genomes_project 7 116555739 116556678 + MGP_NODShiLtJ_P0085162 Olfr641 protein_coding protein_coding MGP_NODShiLtJ_T0102146.1 MGP_NODShiLtJ_G0040312.1 mouse_genomes_project 7 50684244 50685101 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085436.1 MGP_NODShiLtJ_G0032648.1 mouse_genomes_project 7 122893719 123066658 - Stk33 protein_coding processed_transcript MGP_NODShiLtJ_T0085437.1 MGP_NODShiLtJ_G0032648.1 mouse_genomes_project 7 122893719 123066653 - MGP_NODShiLtJ_P0085437 Stk33 protein_coding protein_coding MGP_NODShiLtJ_T0085438.1 MGP_NODShiLtJ_G0032648.1 mouse_genomes_project 7 122893719 123066394 - MGP_NODShiLtJ_P0085438 Stk33 protein_coding protein_coding MGP_NODShiLtJ_T0085439.1 MGP_NODShiLtJ_G0032648.1 mouse_genomes_project 7 122893719 123066658 - MGP_NODShiLtJ_P0085439 Stk33 protein_coding protein_coding MGP_NODShiLtJ_T0085440.1 MGP_NODShiLtJ_G0032648.1 mouse_genomes_project 7 122894091 123066575 - MGP_NODShiLtJ_P0085440 Stk33 protein_coding protein_coding MGP_NODShiLtJ_T0085933.1 MGP_NODShiLtJ_G0032764.1 mouse_genomes_project 7 137134102 137498297 + MGP_NODShiLtJ_P0085933 Prkcb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085934.1 MGP_NODShiLtJ_G0032764.1 mouse_genomes_project 7 137134648 137492559 + MGP_NODShiLtJ_P0085934 Prkcb protein_coding protein_coding MGP_NODShiLtJ_T0085935.1 MGP_NODShiLtJ_G0032764.1 mouse_genomes_project 7 137134660 137498300 + MGP_NODShiLtJ_P0085935 Prkcb protein_coding protein_coding MGP_NODShiLtJ_T0085936.1 MGP_NODShiLtJ_G0032764.1 mouse_genomes_project 7 137135379 137281801 + Prkcb protein_coding processed_transcript MGP_NODShiLtJ_T0085937.1 MGP_NODShiLtJ_G0032764.1 mouse_genomes_project 7 137269122 137317353 + Prkcb protein_coding processed_transcript MGP_NODShiLtJ_T0085938.1 MGP_NODShiLtJ_G0032764.1 mouse_genomes_project 7 137456101 137458895 + Prkcb protein_coding retained_intron MGP_NODShiLtJ_T0085939.1 MGP_NODShiLtJ_G0032764.1 mouse_genomes_project 7 137462144 137491982 + Prkcb protein_coding processed_transcript MGP_NODShiLtJ_T0085940.1 MGP_NODShiLtJ_G0032764.1 mouse_genomes_project 7 137497356 137498300 + Prkcb protein_coding retained_intron MGP_NODShiLtJ_T0084488.1 MGP_NODShiLtJ_G0032271.1 mouse_genomes_project 7 92472910 92482482 - Cemip protein_coding retained_intron MGP_NODShiLtJ_T0084489.1 MGP_NODShiLtJ_G0032271.1 mouse_genomes_project 7 92473748 92627401 - MGP_NODShiLtJ_P0084489 Cemip protein_coding protein_coding MGP_NODShiLtJ_T0084490.1 MGP_NODShiLtJ_G0032271.1 mouse_genomes_project 7 92484673 92627593 - Cemip protein_coding retained_intron MGP_NODShiLtJ_T0084491.1 MGP_NODShiLtJ_G0032271.1 mouse_genomes_project 7 92488586 92515589 - Cemip protein_coding retained_intron MGP_NODShiLtJ_T0084492.1 MGP_NODShiLtJ_G0032271.1 mouse_genomes_project 7 92498855 92627593 - Cemip protein_coding retained_intron MGP_NODShiLtJ_T0086498.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057490 143060509 + MGP_NODShiLtJ_P0086498 Hsd3b7 protein_coding protein_coding MGP_NODShiLtJ_T0086499.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057901 143061110 + Hsd3b7 protein_coding retained_intron MGP_NODShiLtJ_T0086500.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057901 143061110 + Hsd3b7 protein_coding retained_intron MGP_NODShiLtJ_T0086501.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057911 143061110 + MGP_NODShiLtJ_P0086501 Hsd3b7 protein_coding protein_coding MGP_NODShiLtJ_T0086502.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057911 143059706 + MGP_NODShiLtJ_P0086502 Hsd3b7 protein_coding protein_coding MGP_NODShiLtJ_T0086503.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057933 143059330 + MGP_NODShiLtJ_P0086503 Hsd3b7 protein_coding protein_coding MGP_NODShiLtJ_T0086504.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057943 143059578 + MGP_NODShiLtJ_P0086504 Hsd3b7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086505.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057944 143059531 + Hsd3b7 protein_coding retained_intron MGP_NODShiLtJ_T0086506.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057955 143059421 + Hsd3b7 protein_coding retained_intron MGP_NODShiLtJ_T0086507.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057968 143059635 + Hsd3b7 protein_coding retained_intron MGP_NODShiLtJ_T0086508.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143057977 143059346 + MGP_NODShiLtJ_P0086508 Hsd3b7 protein_coding protein_coding MGP_NODShiLtJ_T0086509.1 MGP_NODShiLtJ_G0032863.1 mouse_genomes_project 7 143058254 143058832 + MGP_NODShiLtJ_P0086509 Hsd3b7 protein_coding protein_coding MGP_NODShiLtJ_T0084620.1 MGP_NODShiLtJ_G0032323.1 mouse_genomes_project 7 103458903 103550540 + MGP_NODShiLtJ_P0084620 Rab30 protein_coding protein_coding MGP_NODShiLtJ_T0084621.1 MGP_NODShiLtJ_G0032323.1 mouse_genomes_project 7 103532390 103550070 + MGP_NODShiLtJ_P0084621 Rab30 protein_coding protein_coding MGP_NODShiLtJ_T0084622.1 MGP_NODShiLtJ_G0032323.1 mouse_genomes_project 7 103532405 103550067 + MGP_NODShiLtJ_P0084622 Rab30 protein_coding protein_coding MGP_NODShiLtJ_T0087167.1 MGP_NODShiLtJ_G0033029.1 mouse_genomes_project 7 157619088 157622082 + MGP_NODShiLtJ_P0087167 Drd4 protein_coding protein_coding MGP_NODShiLtJ_T0082093.1 MGP_NODShiLtJ_G0031719.1 mouse_genomes_project 7 27518628 27527004 + Numbl protein_coding processed_transcript MGP_NODShiLtJ_T0082094.1 MGP_NODShiLtJ_G0031719.1 mouse_genomes_project 7 27518920 27543610 + MGP_NODShiLtJ_P0082094 Numbl protein_coding protein_coding MGP_NODShiLtJ_T0082095.1 MGP_NODShiLtJ_G0031719.1 mouse_genomes_project 7 27518978 27525153 + Numbl protein_coding processed_transcript MGP_NODShiLtJ_T0082096.1 MGP_NODShiLtJ_G0031719.1 mouse_genomes_project 7 27519001 27543613 + Numbl protein_coding retained_intron MGP_NODShiLtJ_T0082097.1 MGP_NODShiLtJ_G0031719.1 mouse_genomes_project 7 27521581 27543450 + Numbl protein_coding retained_intron MGP_NODShiLtJ_T0084412.1 MGP_NODShiLtJ_G0032248.1 mouse_genomes_project 7 89836458 89870221 - MGP_NODShiLtJ_P0084412 Fsd2 protein_coding protein_coding MGP_NODShiLtJ_T0081219.1 MGP_NODShiLtJ_G0031457.1 mouse_genomes_project 7 10976415 10988898 - MGP_NODShiLtJ_P0081219 Zscan18 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0015605.1 MGP_NODShiLtJ_G0013713.1 mouse_genomes_project 7 24040669 24043429 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010773.1 MGP_NODShiLtJ_G0008906.1 mouse_genomes_project 7 67680396 67680476 - Mir344d-2 miRNA miRNA MGP_NODShiLtJ_T0008805.1 MGP_NODShiLtJ_G0007105.1 mouse_genomes_project 7 72106981 72163682 - lincRNA lincRNA MGP_NODShiLtJ_T0082562.1 MGP_NODShiLtJ_G0031835.1 mouse_genomes_project 7 31095117 31105797 - Kirrel2 protein_coding retained_intron MGP_NODShiLtJ_T0082563.1 MGP_NODShiLtJ_G0031835.1 mouse_genomes_project 7 31095119 31105660 - MGP_NODShiLtJ_P0082563 Kirrel2 protein_coding protein_coding MGP_NODShiLtJ_T0082564.1 MGP_NODShiLtJ_G0031835.1 mouse_genomes_project 7 31095651 31099225 - MGP_NODShiLtJ_P0082564 Kirrel2 protein_coding protein_coding MGP_NODShiLtJ_T0082565.1 MGP_NODShiLtJ_G0031835.1 mouse_genomes_project 7 31095699 31104994 - MGP_NODShiLtJ_P0082565 Kirrel2 protein_coding protein_coding MGP_NODShiLtJ_T0082566.1 MGP_NODShiLtJ_G0031835.1 mouse_genomes_project 7 31105128 31105835 - Kirrel2 protein_coding processed_transcript MGP_NODShiLtJ_T0083620.1 MGP_NODShiLtJ_G0032083.1 mouse_genomes_project 7 49568175 49588125 - MGP_NODShiLtJ_P0083620 Tph1 protein_coding protein_coding MGP_NODShiLtJ_T0083621.1 MGP_NODShiLtJ_G0032083.1 mouse_genomes_project 7 49568206 49593336 - MGP_NODShiLtJ_P0083621 Tph1 protein_coding protein_coding MGP_NODShiLtJ_T0083622.1 MGP_NODShiLtJ_G0032083.1 mouse_genomes_project 7 49568471 49586049 - MGP_NODShiLtJ_P0083622 Tph1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083623.1 MGP_NODShiLtJ_G0032083.1 mouse_genomes_project 7 49568471 49586036 - MGP_NODShiLtJ_P0083623 Tph1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083624.1 MGP_NODShiLtJ_G0032083.1 mouse_genomes_project 7 49570531 49572210 - Tph1 protein_coding retained_intron MGP_NODShiLtJ_T0083625.1 MGP_NODShiLtJ_G0032083.1 mouse_genomes_project 7 49577608 49581415 - Tph1 protein_coding retained_intron MGP_NODShiLtJ_T0083626.1 MGP_NODShiLtJ_G0032083.1 mouse_genomes_project 7 49580766 49583063 - Tph1 protein_coding retained_intron MGP_NODShiLtJ_T0083627.1 MGP_NODShiLtJ_G0032083.1 mouse_genomes_project 7 49581084 49588091 - MGP_NODShiLtJ_P0083627 Tph1 protein_coding protein_coding MGP_NODShiLtJ_T0082556.1 MGP_NODShiLtJ_G0031832.1 mouse_genomes_project 7 31062890 31066362 - MGP_NODShiLtJ_P0082556 Hcst protein_coding protein_coding MGP_NODShiLtJ_T0081081.1 MGP_NODShiLtJ_G0031381.1 mouse_genomes_project 7 2113072 2134612 + MGP_NODShiLtJ_P0081081 Ssc5d protein_coding protein_coding MGP_NODShiLtJ_T0008837.1 MGP_NODShiLtJ_G0007130.1 mouse_genomes_project 7 80651231 80656039 + 4930429H19Rik lincRNA lincRNA MGP_NODShiLtJ_T0008838.1 MGP_NODShiLtJ_G0007130.1 mouse_genomes_project 7 80651381 80652806 + 4930429H19Rik lincRNA lincRNA MGP_NODShiLtJ_T0081717.1 MGP_NODShiLtJ_G0031608.1 mouse_genomes_project 7 19323402 19335668 - MGP_NODShiLtJ_P0081717 Ceacam19 protein_coding protein_coding MGP_NODShiLtJ_T0102132.1 MGP_NODShiLtJ_G0040298.1 mouse_genomes_project 7 46672379 46674589 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083859.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70579705 70708863 + MGP_NODShiLtJ_P0083859 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083860.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70579715 70661151 + MGP_NODShiLtJ_P0083860 Trpm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083861.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70579715 70708220 + MGP_NODShiLtJ_P0083861 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083862.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70579798 70708220 + MGP_NODShiLtJ_P0083862 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083863.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616063 70644804 + Trpm1 protein_coding retained_intron MGP_NODShiLtJ_T0083864.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616141 70629907 + Trpm1 protein_coding processed_transcript MGP_NODShiLtJ_T0083865.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616141 70657798 + MGP_NODShiLtJ_P0083865 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083866.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616232 70657726 + Trpm1 protein_coding retained_intron MGP_NODShiLtJ_T0083867.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616234 70708845 + MGP_NODShiLtJ_P0083867 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083868.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616235 70633931 + MGP_NODShiLtJ_P0083868 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083869.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616237 70651697 + MGP_NODShiLtJ_P0083869 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083870.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616266 70651697 + MGP_NODShiLtJ_P0083870 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083871.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70616283 70633904 + MGP_NODShiLtJ_P0083871 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083872.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70629885 70634047 + MGP_NODShiLtJ_P0083872 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083873.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70635023 70644267 + Trpm1 protein_coding processed_transcript MGP_NODShiLtJ_T0083874.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70635023 70641705 + MGP_NODShiLtJ_P0083874 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083875.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70643401 70653318 + Trpm1 protein_coding retained_intron MGP_NODShiLtJ_T0083876.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70644286 70656722 + MGP_NODShiLtJ_P0083876 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0083877.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70652836 70656185 + Trpm1 protein_coding retained_intron MGP_NODShiLtJ_T0083878.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70660992 70680424 + Trpm1 protein_coding retained_intron MGP_NODShiLtJ_T0083879.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70661359 70667239 + Trpm1 protein_coding processed_transcript MGP_NODShiLtJ_T0083880.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70682650 70707228 + Trpm1 protein_coding retained_intron MGP_NODShiLtJ_T0083881.1 MGP_NODShiLtJ_G0032151.1 mouse_genomes_project 7 70682863 70707108 + MGP_NODShiLtJ_P0083881 Trpm1 protein_coding protein_coding MGP_NODShiLtJ_T0081166.1 MGP_NODShiLtJ_G0031422.1 mouse_genomes_project 7 3938257 3939311 - MGP_NODShiLtJ_P0081166 Olfr1349 protein_coding protein_coding MGP_NODShiLtJ_T0086510.1 MGP_NODShiLtJ_G0032864.1 mouse_genomes_project 7 143061207 143085545 - MGP_NODShiLtJ_P0086510 Stx1b protein_coding protein_coding MGP_NODShiLtJ_T0086511.1 MGP_NODShiLtJ_G0032864.1 mouse_genomes_project 7 143064683 143068236 - MGP_NODShiLtJ_P0086511 Stx1b protein_coding protein_coding MGP_NODShiLtJ_T0086743.1 MGP_NODShiLtJ_G0032906.1 mouse_genomes_project 7 146933148 146946994 - MGP_NODShiLtJ_P0086743 Cuzd1 protein_coding protein_coding MGP_NODShiLtJ_T0008766.1 MGP_NODShiLtJ_G0007078.1 mouse_genomes_project 7 38669771 38675726 + Gm28077 lincRNA lincRNA MGP_NODShiLtJ_T0085176.1 MGP_NODShiLtJ_G0032513.1 mouse_genomes_project 7 116803946 116814131 + Trim6 protein_coding retained_intron MGP_NODShiLtJ_T0085177.1 MGP_NODShiLtJ_G0032513.1 mouse_genomes_project 7 116803948 116820365 + MGP_NODShiLtJ_P0085177 Trim6 protein_coding protein_coding MGP_NODShiLtJ_T0085178.1 MGP_NODShiLtJ_G0032513.1 mouse_genomes_project 7 116803990 116812485 + MGP_NODShiLtJ_P0085178 Trim6 protein_coding protein_coding MGP_NODShiLtJ_T0085179.1 MGP_NODShiLtJ_G0032513.1 mouse_genomes_project 7 116804582 116812522 + MGP_NODShiLtJ_P0085179 Trim6 protein_coding protein_coding MGP_NODShiLtJ_T0085180.1 MGP_NODShiLtJ_G0032513.1 mouse_genomes_project 7 116806337 116813404 + MGP_NODShiLtJ_P0085180 Trim6 protein_coding protein_coding MGP_NODShiLtJ_T0085181.1 MGP_NODShiLtJ_G0032513.1 mouse_genomes_project 7 116812095 116818310 + MGP_NODShiLtJ_P0085181 Trim6 protein_coding protein_coding MGP_NODShiLtJ_T0008940.1 MGP_NODShiLtJ_G0007194.1 mouse_genomes_project 7 141999496 142009522 + Gm44854 lincRNA lincRNA MGP_NODShiLtJ_T0084036.1 MGP_NODShiLtJ_G0032184.1 mouse_genomes_project 7 79311553 79558524 - MGP_NODShiLtJ_P0084036 Mctp2 protein_coding protein_coding MGP_NODShiLtJ_T0084037.1 MGP_NODShiLtJ_G0032184.1 mouse_genomes_project 7 79314135 79345756 - MGP_NODShiLtJ_P0084037 Mctp2 protein_coding protein_coding MGP_NODShiLtJ_T0084038.1 MGP_NODShiLtJ_G0032184.1 mouse_genomes_project 7 79356880 79404083 - MGP_NODShiLtJ_P0084038 Mctp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084039.1 MGP_NODShiLtJ_G0032184.1 mouse_genomes_project 7 79469672 79473953 - Mctp2 protein_coding retained_intron MGP_NODShiLtJ_T0084040.1 MGP_NODShiLtJ_G0032184.1 mouse_genomes_project 7 79504282 79558524 - Mctp2 protein_coding retained_intron MGP_NODShiLtJ_T0084200.1 MGP_NODShiLtJ_G0032210.1 mouse_genomes_project 7 87834859 87848312 - MGP_NODShiLtJ_P0084200 Plin1 protein_coding protein_coding MGP_NODShiLtJ_T0084201.1 MGP_NODShiLtJ_G0032210.1 mouse_genomes_project 7 87836717 87847696 - MGP_NODShiLtJ_P0084201 Plin1 protein_coding protein_coding MGP_NODShiLtJ_T0084202.1 MGP_NODShiLtJ_G0032210.1 mouse_genomes_project 7 87836717 87848301 - MGP_NODShiLtJ_P0084202 Plin1 protein_coding protein_coding MGP_NODShiLtJ_T0084203.1 MGP_NODShiLtJ_G0032210.1 mouse_genomes_project 7 87837934 87838842 - MGP_NODShiLtJ_P0084203 Plin1 protein_coding protein_coding MGP_NODShiLtJ_T0084204.1 MGP_NODShiLtJ_G0032210.1 mouse_genomes_project 7 87840633 87845390 - MGP_NODShiLtJ_P0084204 Plin1 protein_coding protein_coding MGP_NODShiLtJ_T0084205.1 MGP_NODShiLtJ_G0032210.1 mouse_genomes_project 7 87842054 87848360 - MGP_NODShiLtJ_P0084205 Plin1 protein_coding protein_coding MGP_NODShiLtJ_T0084206.1 MGP_NODShiLtJ_G0032210.1 mouse_genomes_project 7 87844507 87848428 - MGP_NODShiLtJ_P0084206 Plin1 protein_coding protein_coding MGP_NODShiLtJ_T0081534.1 MGP_NODShiLtJ_G0031561.1 mouse_genomes_project 7 18350446 18364150 - MGP_NODShiLtJ_P0081534 Foxa3 protein_coding protein_coding MGP_NODShiLtJ_T0082291.1 MGP_NODShiLtJ_G0031771.1 mouse_genomes_project 7 29206768 29207195 - Mrps12 protein_coding processed_transcript MGP_NODShiLtJ_T0082292.1 MGP_NODShiLtJ_G0031771.1 mouse_genomes_project 7 29206768 29211682 - MGP_NODShiLtJ_P0082292 Mrps12 protein_coding protein_coding MGP_NODShiLtJ_T0082293.1 MGP_NODShiLtJ_G0031771.1 mouse_genomes_project 7 29206769 29211732 - MGP_NODShiLtJ_P0082293 Mrps12 protein_coding protein_coding MGP_NODShiLtJ_T0082294.1 MGP_NODShiLtJ_G0031771.1 mouse_genomes_project 7 29207019 29207949 - MGP_NODShiLtJ_P0082294 Mrps12 protein_coding protein_coding MGP_NODShiLtJ_T0085117.1 MGP_NODShiLtJ_G0032458.1 mouse_genomes_project 7 115444889 115445825 + MGP_NODShiLtJ_P0085117 Olfr594 protein_coding protein_coding MGP_NODShiLtJ_T0085844.1 MGP_NODShiLtJ_G0032741.1 mouse_genomes_project 7 135470709 135547114 + MGP_NODShiLtJ_P0085844 Vwa3a protein_coding protein_coding MGP_NODShiLtJ_T0085845.1 MGP_NODShiLtJ_G0032741.1 mouse_genomes_project 7 135470709 135529906 + MGP_NODShiLtJ_P0085845 Vwa3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085846.1 MGP_NODShiLtJ_G0032741.1 mouse_genomes_project 7 135471199 135547111 + MGP_NODShiLtJ_P0085846 Vwa3a protein_coding protein_coding MGP_NODShiLtJ_T0085847.1 MGP_NODShiLtJ_G0032741.1 mouse_genomes_project 7 135471199 135547315 + MGP_NODShiLtJ_P0085847 Vwa3a protein_coding protein_coding MGP_NODShiLtJ_T0085848.1 MGP_NODShiLtJ_G0032741.1 mouse_genomes_project 7 135471263 135546984 + MGP_NODShiLtJ_P0085848 Vwa3a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085849.1 MGP_NODShiLtJ_G0032741.1 mouse_genomes_project 7 135521962 135529907 + MGP_NODShiLtJ_P0085849 Vwa3a protein_coding protein_coding MGP_NODShiLtJ_T0085850.1 MGP_NODShiLtJ_G0032741.1 mouse_genomes_project 7 135523620 135529907 + Vwa3a protein_coding processed_transcript MGP_NODShiLtJ_T0085851.1 MGP_NODShiLtJ_G0032741.1 mouse_genomes_project 7 135526050 135532423 + MGP_NODShiLtJ_P0085851 Vwa3a protein_coding protein_coding MGP_NODShiLtJ_T0015794.1 MGP_NODShiLtJ_G0013902.1 mouse_genomes_project 7 141353196 141353444 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086921.1 MGP_NODShiLtJ_G0032953.1 mouse_genomes_project 7 155173949 155190659 + MGP_NODShiLtJ_P0086921 Dpysl4 protein_coding protein_coding MGP_NODShiLtJ_T0086922.1 MGP_NODShiLtJ_G0032953.1 mouse_genomes_project 7 155173950 155182410 + Dpysl4 protein_coding processed_transcript MGP_NODShiLtJ_T0086923.1 MGP_NODShiLtJ_G0032953.1 mouse_genomes_project 7 155173975 155189750 + Dpysl4 protein_coding retained_intron MGP_NODShiLtJ_T0086924.1 MGP_NODShiLtJ_G0032953.1 mouse_genomes_project 7 155173976 155189738 + Dpysl4 protein_coding retained_intron MGP_NODShiLtJ_T0086925.1 MGP_NODShiLtJ_G0032953.1 mouse_genomes_project 7 155176313 155182376 + MGP_NODShiLtJ_P0086925 Dpysl4 protein_coding protein_coding MGP_NODShiLtJ_T0086926.1 MGP_NODShiLtJ_G0032953.1 mouse_genomes_project 7 155177195 155189732 + MGP_NODShiLtJ_P0086926 Dpysl4 protein_coding protein_coding MGP_NODShiLtJ_T0008962.1 MGP_NODShiLtJ_G0007207.1 mouse_genomes_project 7 145424372 145443882 + Gm4265 lincRNA lincRNA MGP_NODShiLtJ_T0086199.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141943340 141951528 - MGP_NODShiLtJ_P0086199 Ppp4c protein_coding protein_coding MGP_NODShiLtJ_T0086200.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141943342 141951372 - MGP_NODShiLtJ_P0086200 Ppp4c protein_coding protein_coding MGP_NODShiLtJ_T0086201.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141943635 141945887 - MGP_NODShiLtJ_P0086201 Ppp4c protein_coding protein_coding MGP_NODShiLtJ_T0086202.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141943705 141944816 - MGP_NODShiLtJ_P0086202 Ppp4c protein_coding protein_coding MGP_NODShiLtJ_T0086203.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141943765 141951525 - MGP_NODShiLtJ_P0086203 Ppp4c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086204.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141944696 141946521 - MGP_NODShiLtJ_P0086204 Ppp4c protein_coding protein_coding MGP_NODShiLtJ_T0086205.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141944944 141951179 - MGP_NODShiLtJ_P0086205 Ppp4c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086206.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141945047 141946494 - Ppp4c protein_coding retained_intron MGP_NODShiLtJ_T0086207.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141945140 141951498 - Ppp4c protein_coding retained_intron MGP_NODShiLtJ_T0086208.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141947989 141951528 - Ppp4c protein_coding retained_intron MGP_NODShiLtJ_T0086209.1 MGP_NODShiLtJ_G0032807.1 mouse_genomes_project 7 141948013 141951514 - Ppp4c protein_coding retained_intron MGP_NODShiLtJ_T0099478.1 MGP_NODShiLtJ_G0037872.1 mouse_genomes_project 7 18609148 18609308 + Gm25134 snRNA snRNA MGP_NODShiLtJ_T0086473.1 MGP_NODShiLtJ_G0032857.1 mouse_genomes_project 7 142966860 142973848 + MGP_NODShiLtJ_P0086473 Ctf1 protein_coding protein_coding MGP_NODShiLtJ_T0086474.1 MGP_NODShiLtJ_G0032857.1 mouse_genomes_project 7 142967061 142972986 + MGP_NODShiLtJ_P0086474 Ctf1 protein_coding protein_coding MGP_NODShiLtJ_T0086475.1 MGP_NODShiLtJ_G0032857.1 mouse_genomes_project 7 142967068 142973246 + MGP_NODShiLtJ_P0086475 Ctf1 protein_coding protein_coding MGP_NODShiLtJ_T0086476.1 MGP_NODShiLtJ_G0032857.1 mouse_genomes_project 7 142967424 142972682 + Ctf1 protein_coding processed_transcript MGP_NODShiLtJ_T0086477.1 MGP_NODShiLtJ_G0032857.1 mouse_genomes_project 7 142967681 142972695 + Ctf1 protein_coding processed_transcript MGP_NODShiLtJ_T0010823.1 MGP_NODShiLtJ_G0008956.1 mouse_genomes_project 7 151474215 151474336 + Mir1962 miRNA miRNA MGP_NODShiLtJ_T0083516.1 MGP_NODShiLtJ_G0032054.1 mouse_genomes_project 7 48491099 48510715 - MGP_NODShiLtJ_P0083516 Fut2 protein_coding protein_coding MGP_NODShiLtJ_T0082286.1 MGP_NODShiLtJ_G0031770.1 mouse_genomes_project 7 29182076 29205300 + MGP_NODShiLtJ_P0082286 Fbxo17 protein_coding protein_coding MGP_NODShiLtJ_T0082287.1 MGP_NODShiLtJ_G0031770.1 mouse_genomes_project 7 29182104 29205294 + MGP_NODShiLtJ_P0082287 Fbxo17 protein_coding protein_coding MGP_NODShiLtJ_T0082288.1 MGP_NODShiLtJ_G0031770.1 mouse_genomes_project 7 29182128 29192503 + Fbxo17 protein_coding retained_intron MGP_NODShiLtJ_T0082289.1 MGP_NODShiLtJ_G0031770.1 mouse_genomes_project 7 29182145 29205300 + MGP_NODShiLtJ_P0082289 Fbxo17 protein_coding protein_coding MGP_NODShiLtJ_T0082290.1 MGP_NODShiLtJ_G0031770.1 mouse_genomes_project 7 29199659 29204638 + MGP_NODShiLtJ_P0082290 Fbxo17 protein_coding protein_coding MGP_NODShiLtJ_T0086149.1 MGP_NODShiLtJ_G0032799.1 mouse_genomes_project 7 141822123 141825936 - MGP_NODShiLtJ_P0086149 Sult1a1 protein_coding protein_coding MGP_NODShiLtJ_T0086150.1 MGP_NODShiLtJ_G0032799.1 mouse_genomes_project 7 141823777 141825993 - MGP_NODShiLtJ_P0086150 Sult1a1 protein_coding protein_coding MGP_NODShiLtJ_T0085783.1 MGP_NODShiLtJ_G0032725.1 mouse_genomes_project 7 134339233 134362834 + MGP_NODShiLtJ_P0085783 Acsm3 protein_coding protein_coding MGP_NODShiLtJ_T0085784.1 MGP_NODShiLtJ_G0032725.1 mouse_genomes_project 7 134339233 134362838 + MGP_NODShiLtJ_P0085784 Acsm3 protein_coding protein_coding MGP_NODShiLtJ_T0085785.1 MGP_NODShiLtJ_G0032725.1 mouse_genomes_project 7 134339234 134362836 + MGP_NODShiLtJ_P0085785 Acsm3 protein_coding protein_coding MGP_NODShiLtJ_T0085786.1 MGP_NODShiLtJ_G0032725.1 mouse_genomes_project 7 134339234 134373987 + MGP_NODShiLtJ_P0085786 Acsm3 protein_coding protein_coding MGP_NODShiLtJ_T0085787.1 MGP_NODShiLtJ_G0032725.1 mouse_genomes_project 7 134344275 134362841 + MGP_NODShiLtJ_P0085787 Acsm3 protein_coding protein_coding MGP_NODShiLtJ_T0085790.1 MGP_NODShiLtJ_G0032725.1 mouse_genomes_project 7 134352448 134357118 + Acsm3 protein_coding retained_intron MGP_NODShiLtJ_T0085791.1 MGP_NODShiLtJ_G0032725.1 mouse_genomes_project 7 134354990 134358958 + Acsm3 protein_coding retained_intron MGP_NODShiLtJ_T0085792.1 MGP_NODShiLtJ_G0032725.1 mouse_genomes_project 7 134358680 134358999 + Acsm3 protein_coding retained_intron MGP_NODShiLtJ_T0081118.1 MGP_NODShiLtJ_G0031399.1 mouse_genomes_project 7 2541342 2605839 - MGP_NODShiLtJ_P0081118 Nlrp2 protein_coding protein_coding MGP_NODShiLtJ_T0015574.1 MGP_NODShiLtJ_G0013682.1 mouse_genomes_project 7 11444384 11445656 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081202.1 MGP_NODShiLtJ_G0031446.1 mouse_genomes_project 7 10267109 10268051 + MGP_NODShiLtJ_P0081202 Vmn1r78 protein_coding protein_coding MGP_NODShiLtJ_T0085410.1 MGP_NODShiLtJ_G0032630.1 mouse_genomes_project 7 122097803 122098760 - MGP_NODShiLtJ_P0085410 Olfr504 protein_coding protein_coding MGP_NODShiLtJ_T0085419.1 MGP_NODShiLtJ_G0032639.1 mouse_genomes_project 7 122434471 122436628 - MGP_NODShiLtJ_P0085419 Olfr516 protein_coding protein_coding MGP_NODShiLtJ_T0083415.1 MGP_NODShiLtJ_G0032030.1 mouse_genomes_project 7 48098754 48132219 - MGP_NODShiLtJ_P0083415 Trpm4 protein_coding protein_coding MGP_NODShiLtJ_T0099512.1 MGP_NODShiLtJ_G0037906.1 mouse_genomes_project 7 123674576 123674630 + Gm24842 snRNA snRNA MGP_NODShiLtJ_T0083179.1 MGP_NODShiLtJ_G0031975.1 mouse_genomes_project 7 46996901 47054167 + MGP_NODShiLtJ_P0083179 Shank1 protein_coding protein_coding MGP_NODShiLtJ_T0083180.1 MGP_NODShiLtJ_G0031975.1 mouse_genomes_project 7 47001042 47049735 + MGP_NODShiLtJ_P0083180 Shank1 protein_coding protein_coding MGP_NODShiLtJ_T0083181.1 MGP_NODShiLtJ_G0031975.1 mouse_genomes_project 7 47001061 47049585 + MGP_NODShiLtJ_P0083181 Shank1 protein_coding protein_coding MGP_NODShiLtJ_T0083182.1 MGP_NODShiLtJ_G0031975.1 mouse_genomes_project 7 47028417 47036074 + Shank1 protein_coding processed_transcript MGP_NODShiLtJ_T0083183.1 MGP_NODShiLtJ_G0031975.1 mouse_genomes_project 7 47028417 47051756 + MGP_NODShiLtJ_P0083183 Shank1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083184.1 MGP_NODShiLtJ_G0031975.1 mouse_genomes_project 7 47034470 47043606 + Shank1 protein_coding retained_intron MGP_NODShiLtJ_T0083185.1 MGP_NODShiLtJ_G0031975.1 mouse_genomes_project 7 47043009 47044305 + Shank1 protein_coding retained_intron MGP_NODShiLtJ_T0005259.1 MGP_NODShiLtJ_G0004454.1 mouse_genomes_project 7 159712397 159811741 - Kcnq1ot1 antisense antisense MGP_NODShiLtJ_T0085356.1 MGP_NODShiLtJ_G0032583.1 mouse_genomes_project 7 120039063 120042237 - MGP_NODShiLtJ_P0085356 Olfr702 protein_coding protein_coding MGP_NODShiLtJ_T0081458.1 MGP_NODShiLtJ_G0031528.1 mouse_genomes_project 7 15811438 15815079 + MGP_NODShiLtJ_P0081458 Gng8 protein_coding protein_coding MGP_NODShiLtJ_T0081459.1 MGP_NODShiLtJ_G0031528.1 mouse_genomes_project 7 15811864 15815089 + MGP_NODShiLtJ_P0081459 Gng8 protein_coding protein_coding MGP_NODShiLtJ_T0081460.1 MGP_NODShiLtJ_G0031528.1 mouse_genomes_project 7 15811923 15815077 + MGP_NODShiLtJ_P0081460 Gng8 protein_coding protein_coding MGP_NODShiLtJ_T0081461.1 MGP_NODShiLtJ_G0031528.1 mouse_genomes_project 7 15811973 15815080 + Gng8 protein_coding processed_transcript MGP_NODShiLtJ_T0081462.1 MGP_NODShiLtJ_G0031528.1 mouse_genomes_project 7 15814300 15815090 + Gng8 protein_coding retained_intron MGP_NODShiLtJ_T0081463.1 MGP_NODShiLtJ_G0031528.1 mouse_genomes_project 7 15814598 15815017 + Gng8 protein_coding retained_intron MGP_NODShiLtJ_T0081284.1 MGP_NODShiLtJ_G0031475.1 mouse_genomes_project 7 11443200 11444151 + MGP_NODShiLtJ_P0081284 Vmn1r88 protein_coding protein_coding MGP_NODShiLtJ_T0010829.1 MGP_NODShiLtJ_G0008962.1 mouse_genomes_project 7 157978390 157978481 + Mir7063 miRNA miRNA MGP_NODShiLtJ_T0085147.1 MGP_NODShiLtJ_G0032487.1 mouse_genomes_project 7 116222907 116223870 - MGP_NODShiLtJ_P0085147 Olfr67 protein_coding protein_coding MGP_NODShiLtJ_T0081317.1 MGP_NODShiLtJ_G0031484.1 mouse_genomes_project 7 12316874 12446771 - MGP_NODShiLtJ_P0081317 protein_coding protein_coding MGP_NODShiLtJ_T0002231.1 MGP_NODShiLtJ_G0002142.1 mouse_genomes_project 7 87710295 87711970 - TEC TEC MGP_NODShiLtJ_T0087037.1 MGP_NODShiLtJ_G0032995.1 mouse_genomes_project 7 156961200 156963208 + MGP_NODShiLtJ_P0087037 Olfr541 protein_coding protein_coding MGP_NODShiLtJ_T0015703.1 MGP_NODShiLtJ_G0013811.1 mouse_genomes_project 7 61905533 61905794 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099489.1 MGP_NODShiLtJ_G0037883.1 mouse_genomes_project 7 60063105 60063212 - Gm24116 snRNA snRNA MGP_NODShiLtJ_T0010790.1 MGP_NODShiLtJ_G0008923.1 mouse_genomes_project 7 70687823 70687940 - Mir6416 miRNA miRNA MGP_NODShiLtJ_T0082472.1 MGP_NODShiLtJ_G0031813.1 mouse_genomes_project 7 30688818 30707961 - MGP_NODShiLtJ_P0082472 Zfp566 protein_coding protein_coding MGP_NODShiLtJ_T0082473.1 MGP_NODShiLtJ_G0031813.1 mouse_genomes_project 7 30694126 30707897 - Zfp566 protein_coding retained_intron MGP_NODShiLtJ_T0102205.1 MGP_NODShiLtJ_G0040371.1 mouse_genomes_project 7 116746673 116747557 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084983.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113948018 113966464 + MGP_NODShiLtJ_P0084983 Anapc15 protein_coding protein_coding MGP_NODShiLtJ_T0084984.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113962950 113964946 + Anapc15 protein_coding processed_transcript MGP_NODShiLtJ_T0084985.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113963260 113966461 + MGP_NODShiLtJ_P0084985 Anapc15 protein_coding protein_coding MGP_NODShiLtJ_T0084986.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113963328 113965148 + Anapc15 protein_coding retained_intron MGP_NODShiLtJ_T0084987.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113963336 113966401 + MGP_NODShiLtJ_P0084987 Anapc15 protein_coding protein_coding MGP_NODShiLtJ_T0084988.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113963337 113968560 + MGP_NODShiLtJ_P0084988 Anapc15 protein_coding protein_coding MGP_NODShiLtJ_T0084989.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113963348 113966459 + Anapc15 protein_coding retained_intron MGP_NODShiLtJ_T0084990.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113963783 113964949 + Anapc15 protein_coding processed_transcript MGP_NODShiLtJ_T0084991.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113963881 113965963 + MGP_NODShiLtJ_P0084991 Anapc15 protein_coding protein_coding MGP_NODShiLtJ_T0084992.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113964308 113965499 + Anapc15 protein_coding retained_intron MGP_NODShiLtJ_T0084993.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113964652 113968881 + MGP_NODShiLtJ_P0084993 Anapc15 protein_coding protein_coding MGP_NODShiLtJ_T0084994.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113964715 113968560 + MGP_NODShiLtJ_P0084994 Anapc15 protein_coding protein_coding MGP_NODShiLtJ_T0084996.1 MGP_NODShiLtJ_G0032400.1 mouse_genomes_project 7 113965912 113966465 + Anapc15 protein_coding processed_transcript MGP_NODShiLtJ_T0100737.1 MGP_NODShiLtJ_G0039131.1 mouse_genomes_project 7 47906677 47906767 - Snord35a snoRNA snoRNA MGP_NODShiLtJ_T0085073.1 MGP_NODShiLtJ_G0032418.1 mouse_genomes_project 7 114589313 114590443 - MGP_NODShiLtJ_P0085073 Olfr543 protein_coding protein_coding MGP_NODShiLtJ_T0005222.1 MGP_NODShiLtJ_G0004427.1 mouse_genomes_project 7 136100418 136183684 - Gm45077 antisense antisense MGP_NODShiLtJ_T0083742.1 MGP_NODShiLtJ_G0032121.1 mouse_genomes_project 7 55556829 55657617 + MGP_NODShiLtJ_P0083742 Ano5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083743.1 MGP_NODShiLtJ_G0032121.1 mouse_genomes_project 7 55557574 55659192 + MGP_NODShiLtJ_P0083743 Ano5 protein_coding protein_coding MGP_NODShiLtJ_T0086579.1 MGP_NODShiLtJ_G0032878.1 mouse_genomes_project 7 143369066 143429668 + MGP_NODShiLtJ_P0086579 protein_coding protein_coding MGP_NODShiLtJ_T0086580.1 MGP_NODShiLtJ_G0032878.1 mouse_genomes_project 7 143369095 143429667 + MGP_NODShiLtJ_P0086580 protein_coding protein_coding MGP_NODShiLtJ_T0086581.1 MGP_NODShiLtJ_G0032878.1 mouse_genomes_project 7 143369105 143428237 + MGP_NODShiLtJ_P0086581 protein_coding protein_coding MGP_NODShiLtJ_T0086583.1 MGP_NODShiLtJ_G0032878.1 mouse_genomes_project 7 143369109 143428678 + MGP_NODShiLtJ_P0086583 protein_coding protein_coding MGP_NODShiLtJ_T0086584.1 MGP_NODShiLtJ_G0032878.1 mouse_genomes_project 7 143369154 143379701 + protein_coding processed_transcript MGP_NODShiLtJ_T0086585.1 MGP_NODShiLtJ_G0032878.1 mouse_genomes_project 7 143369169 143379943 + MGP_NODShiLtJ_P0086585 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018189.1 MGP_NODShiLtJ_G0015530.1 mouse_genomes_project 7 46925567 46945461 + Gm28496 processed_transcript processed_transcript MGP_NODShiLtJ_T0018190.1 MGP_NODShiLtJ_G0015530.1 mouse_genomes_project 7 46925615 46944629 + Gm28496 processed_transcript processed_transcript MGP_NODShiLtJ_T0018267.1 MGP_NODShiLtJ_G0015564.1 mouse_genomes_project 7 156101548 156115546 + Gm16201 processed_transcript processed_transcript MGP_NODShiLtJ_T0018268.1 MGP_NODShiLtJ_G0015564.1 mouse_genomes_project 7 156101592 156131749 + Gm16201 processed_transcript processed_transcript MGP_NODShiLtJ_T0084000.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74181741 74321023 - MGP_NODShiLtJ_P0084000 Lrrc28 protein_coding protein_coding MGP_NODShiLtJ_T0084001.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74181742 74315638 - MGP_NODShiLtJ_P0084001 Lrrc28 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084002.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74182793 74250306 - Lrrc28 protein_coding processed_transcript MGP_NODShiLtJ_T0084003.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74198135 74315674 - MGP_NODShiLtJ_P0084003 Lrrc28 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084004.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74198260 74205045 - Lrrc28 protein_coding processed_transcript MGP_NODShiLtJ_T0084005.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74200308 74294369 - Lrrc28 protein_coding processed_transcript MGP_NODShiLtJ_T0084006.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74200399 74280769 - Lrrc28 protein_coding processed_transcript MGP_NODShiLtJ_T0084007.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74200409 74294318 - Lrrc28 protein_coding processed_transcript MGP_NODShiLtJ_T0084008.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74214654 74320996 - MGP_NODShiLtJ_P0084008 Lrrc28 protein_coding protein_coding MGP_NODShiLtJ_T0084009.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74266010 74320999 - MGP_NODShiLtJ_P0084009 Lrrc28 protein_coding protein_coding MGP_NODShiLtJ_T0084010.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74267012 74294340 - Lrrc28 protein_coding processed_transcript MGP_NODShiLtJ_T0084011.1 MGP_NODShiLtJ_G0032176.1 mouse_genomes_project 7 74292317 74321060 - MGP_NODShiLtJ_P0084011 Lrrc28 protein_coding protein_coding MGP_NODShiLtJ_T0081182.1 MGP_NODShiLtJ_G0031430.1 mouse_genomes_project 7 4780146 4800772 - MGP_NODShiLtJ_P0081182 Clcn4 protein_coding protein_coding MGP_NODShiLtJ_T0101394.1 MGP_NODShiLtJ_G0039603.1 mouse_genomes_project 7 41099446 41138471 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101395.1 MGP_NODShiLtJ_G0039603.1 mouse_genomes_project 7 41109721 41136817 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0102204.1 MGP_NODShiLtJ_G0040370.1 mouse_genomes_project 7 116505812 116506274 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087453.1 MGP_NODShiLtJ_G0033078.1 mouse_genomes_project 7 159977520 159980221 - MGP_NODShiLtJ_P0087453 Cdkn1c protein_coding protein_coding MGP_NODShiLtJ_T0087454.1 MGP_NODShiLtJ_G0033078.1 mouse_genomes_project 7 159977520 159980221 - MGP_NODShiLtJ_P0087454 Cdkn1c protein_coding protein_coding MGP_NODShiLtJ_T0087501.1 MGP_NODShiLtJ_G0033092.1 mouse_genomes_project 7 160559362 160717572 + MGP_NODShiLtJ_P0087501 Shank2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087502.1 MGP_NODShiLtJ_G0033092.1 mouse_genomes_project 7 160559365 160717430 + MGP_NODShiLtJ_P0087502 Shank2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087503.1 MGP_NODShiLtJ_G0033092.1 mouse_genomes_project 7 160582156 161026521 + MGP_NODShiLtJ_P0087503 Shank2 protein_coding protein_coding MGP_NODShiLtJ_T0087504.1 MGP_NODShiLtJ_G0033092.1 mouse_genomes_project 7 160764392 161026521 + MGP_NODShiLtJ_P0087504 Shank2 protein_coding protein_coding MGP_NODShiLtJ_T0087505.1 MGP_NODShiLtJ_G0033092.1 mouse_genomes_project 7 160879145 161024702 + MGP_NODShiLtJ_P0087505 Shank2 protein_coding protein_coding MGP_NODShiLtJ_T0087506.1 MGP_NODShiLtJ_G0033092.1 mouse_genomes_project 7 160879199 161026509 + Shank2 protein_coding retained_intron MGP_NODShiLtJ_T0087507.1 MGP_NODShiLtJ_G0033092.1 mouse_genomes_project 7 161019821 161022658 + Shank2 protein_coding processed_transcript MGP_NODShiLtJ_T0008792.1 MGP_NODShiLtJ_G0007095.1 mouse_genomes_project 7 47187887 47188766 + Gm45123 lincRNA lincRNA MGP_NODShiLtJ_T0086601.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143565079 143571506 + MGP_NODShiLtJ_P0086601 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086602.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143565114 143571814 + MGP_NODShiLtJ_P0086602 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086603.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143565114 143571467 + MGP_NODShiLtJ_P0086603 protein_coding protein_coding MGP_NODShiLtJ_T0086604.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143566141 143571814 + protein_coding retained_intron MGP_NODShiLtJ_T0086605.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143566141 143571814 + protein_coding retained_intron MGP_NODShiLtJ_T0086606.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143566141 143571814 + protein_coding retained_intron MGP_NODShiLtJ_T0086607.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143566141 143571814 + protein_coding retained_intron MGP_NODShiLtJ_T0086608.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143566141 143571814 + protein_coding retained_intron MGP_NODShiLtJ_T0086609.1 MGP_NODShiLtJ_G0032885.1 mouse_genomes_project 7 143566299 143571468 + MGP_NODShiLtJ_P0086609 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085368.1 MGP_NODShiLtJ_G0032595.1 mouse_genomes_project 7 120319601 120320576 + MGP_NODShiLtJ_P0085368 Olfr713 protein_coding protein_coding MGP_NODShiLtJ_T0082073.1 MGP_NODShiLtJ_G0031714.1 mouse_genomes_project 7 27430235 27431643 - MGP_NODShiLtJ_P0082073 Mia protein_coding protein_coding MGP_NODShiLtJ_T0082074.1 MGP_NODShiLtJ_G0031714.1 mouse_genomes_project 7 27430237 27431621 - Mia protein_coding retained_intron MGP_NODShiLtJ_T0082075.1 MGP_NODShiLtJ_G0031714.1 mouse_genomes_project 7 27430237 27431651 - MGP_NODShiLtJ_P0082075 Mia protein_coding protein_coding MGP_NODShiLtJ_T0082076.1 MGP_NODShiLtJ_G0031714.1 mouse_genomes_project 7 27430982 27431490 - Mia protein_coding processed_transcript MGP_NODShiLtJ_T0086389.1 MGP_NODShiLtJ_G0032843.1 mouse_genomes_project 7 142608365 142616261 - MGP_NODShiLtJ_P0086389 protein_coding protein_coding MGP_NODShiLtJ_T0083277.1 MGP_NODShiLtJ_G0031993.1 mouse_genomes_project 7 47479507 47494124 - MGP_NODShiLtJ_P0083277 Zfp473 protein_coding protein_coding MGP_NODShiLtJ_T0083278.1 MGP_NODShiLtJ_G0031993.1 mouse_genomes_project 7 47479517 47501374 - MGP_NODShiLtJ_P0083278 Zfp473 protein_coding protein_coding MGP_NODShiLtJ_T0083279.1 MGP_NODShiLtJ_G0031993.1 mouse_genomes_project 7 47479529 47501148 - MGP_NODShiLtJ_P0083279 Zfp473 protein_coding protein_coding MGP_NODShiLtJ_T0083280.1 MGP_NODShiLtJ_G0031993.1 mouse_genomes_project 7 47479541 47500806 - MGP_NODShiLtJ_P0083280 Zfp473 protein_coding protein_coding MGP_NODShiLtJ_T0083281.1 MGP_NODShiLtJ_G0031993.1 mouse_genomes_project 7 47480035 47501063 - MGP_NODShiLtJ_P0083281 Zfp473 protein_coding protein_coding MGP_NODShiLtJ_T0083282.1 MGP_NODShiLtJ_G0031993.1 mouse_genomes_project 7 47482485 47501106 - MGP_NODShiLtJ_P0083282 Zfp473 protein_coding protein_coding MGP_NODShiLtJ_T0083283.1 MGP_NODShiLtJ_G0031993.1 mouse_genomes_project 7 47482636 47503807 - MGP_NODShiLtJ_P0083283 Zfp473 protein_coding protein_coding MGP_NODShiLtJ_T0087277.1 MGP_NODShiLtJ_G0033045.1 mouse_genomes_project 7 157910117 157990693 + MGP_NODShiLtJ_P0087277 Ap2a2 protein_coding protein_coding MGP_NODShiLtJ_T0087278.1 MGP_NODShiLtJ_G0033045.1 mouse_genomes_project 7 157910152 157959375 + Ap2a2 protein_coding retained_intron MGP_NODShiLtJ_T0087279.1 MGP_NODShiLtJ_G0033045.1 mouse_genomes_project 7 157910474 157955075 + MGP_NODShiLtJ_P0087279 Ap2a2 protein_coding protein_coding MGP_NODShiLtJ_T0081737.1 MGP_NODShiLtJ_G0031623.1 mouse_genomes_project 7 23567508 23568480 + MGP_NODShiLtJ_P0081737 Vmn1r179 protein_coding protein_coding MGP_NODShiLtJ_T0082189.1 MGP_NODShiLtJ_G0031739.1 mouse_genomes_project 7 28183366 28213478 + MGP_NODShiLtJ_P0082189 Zfp59 protein_coding protein_coding MGP_NODShiLtJ_T0005107.1 MGP_NODShiLtJ_G0004346.1 mouse_genomes_project 7 19253768 19255842 + Gm16174 antisense antisense MGP_NODShiLtJ_T0010791.1 MGP_NODShiLtJ_G0008924.1 mouse_genomes_project 7 71420787 71420865 - Gm25249 miRNA miRNA MGP_NODShiLtJ_T0099490.1 MGP_NODShiLtJ_G0037884.1 mouse_genomes_project 7 60620244 60620306 + Gm26482 snRNA snRNA MGP_NODShiLtJ_T0015749.1 MGP_NODShiLtJ_G0013857.1 mouse_genomes_project 7 105869942 105870333 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011580.1 MGP_NODShiLtJ_G0009713.1 mouse_genomes_project 7 101543231 101543441 - Gm27470 misc_RNA misc_RNA MGP_NODShiLtJ_T0087027.1 MGP_NODShiLtJ_G0032985.1 mouse_genomes_project 7 156614538 156615468 - MGP_NODShiLtJ_P0087027 Olfr532 protein_coding protein_coding MGP_NODShiLtJ_T0084462.1 MGP_NODShiLtJ_G0032263.1 mouse_genomes_project 7 92031197 92039593 - MGP_NODShiLtJ_P0084462 protein_coding protein_coding MGP_NODShiLtJ_T0083688.1 MGP_NODShiLtJ_G0032105.1 mouse_genomes_project 7 51978986 51981876 - MGP_NODShiLtJ_P0083688 Mrgprb4 protein_coding protein_coding MGP_NODShiLtJ_T0085393.1 MGP_NODShiLtJ_G0032613.1 mouse_genomes_project 7 121393675 121395717 + MGP_NODShiLtJ_P0085393 protein_coding protein_coding MGP_NODShiLtJ_T0102071.1 MGP_NODShiLtJ_G0040238.1 mouse_genomes_project 7 10061740 10061939 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083367.1 MGP_NODShiLtJ_G0032019.1 mouse_genomes_project 7 47911520 47919088 - MGP_NODShiLtJ_P0083367 protein_coding protein_coding MGP_NODShiLtJ_T0015665.1 MGP_NODShiLtJ_G0013773.1 mouse_genomes_project 7 43223910 43231573 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008921.1 MGP_NODShiLtJ_G0007180.1 mouse_genomes_project 7 131628450 131678311 + Gm45152 lincRNA lincRNA MGP_NODShiLtJ_T0008932.1 MGP_NODShiLtJ_G0007188.1 mouse_genomes_project 7 140419275 140421428 + 4930571K23Rik lincRNA lincRNA MGP_NODShiLtJ_T0008933.1 MGP_NODShiLtJ_G0007188.1 mouse_genomes_project 7 140419426 140421422 + 4930571K23Rik lincRNA lincRNA MGP_NODShiLtJ_T0097824.1 MGP_NODShiLtJ_G0036236.1 mouse_genomes_project 7 68260827 68268284 - pseudogene pseudogene MGP_NODShiLtJ_T0015651.1 MGP_NODShiLtJ_G0013759.1 mouse_genomes_project 7 35662206 35662851 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084995.1 MGP_NODShiLtJ_G0032401.1 mouse_genomes_project 7 113965293 113970821 - MGP_NODShiLtJ_P0084995 Tomt protein_coding protein_coding MGP_NODShiLtJ_T0084997.1 MGP_NODShiLtJ_G0032401.1 mouse_genomes_project 7 113966738 113973395 - MGP_NODShiLtJ_P0084997 Tomt protein_coding protein_coding MGP_NODShiLtJ_T0082340.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29397398 29467775 - MGP_NODShiLtJ_P0082340 Actn4 protein_coding protein_coding MGP_NODShiLtJ_T0082341.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29397399 29467618 - MGP_NODShiLtJ_P0082341 Actn4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082342.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29397399 29467618 - MGP_NODShiLtJ_P0082342 Actn4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082343.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29397803 29411536 - Actn4 protein_coding processed_transcript MGP_NODShiLtJ_T0082344.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29398382 29399003 - Actn4 protein_coding retained_intron MGP_NODShiLtJ_T0082345.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29399792 29401182 - Actn4 protein_coding retained_intron MGP_NODShiLtJ_T0082346.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29402770 29467658 - MGP_NODShiLtJ_P0082346 Actn4 protein_coding protein_coding MGP_NODShiLtJ_T0082347.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29406065 29411837 - Actn4 protein_coding processed_transcript MGP_NODShiLtJ_T0082348.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29411164 29423372 - MGP_NODShiLtJ_P0082348 Actn4 protein_coding protein_coding MGP_NODShiLtJ_T0082349.1 MGP_NODShiLtJ_G0031782.1 mouse_genomes_project 7 29417528 29455197 - MGP_NODShiLtJ_P0082349 Actn4 protein_coding protein_coding MGP_NODShiLtJ_T0082032.1 MGP_NODShiLtJ_G0031698.1 mouse_genomes_project 7 26397344 26423493 - MGP_NODShiLtJ_P0082032 Nlrp9c protein_coding protein_coding MGP_NODShiLtJ_T0082033.1 MGP_NODShiLtJ_G0031698.1 mouse_genomes_project 7 26405914 26435918 - Nlrp9c protein_coding retained_intron MGP_NODShiLtJ_T0082034.1 MGP_NODShiLtJ_G0031698.1 mouse_genomes_project 7 26405914 26435914 - Nlrp9c protein_coding processed_transcript MGP_NODShiLtJ_T0082035.1 MGP_NODShiLtJ_G0031698.1 mouse_genomes_project 7 26421516 26435918 - Nlrp9c protein_coding retained_intron MGP_NODShiLtJ_T0018173.1 MGP_NODShiLtJ_G0015520.1 mouse_genomes_project 7 4083283 4093955 - Gm44015 processed_transcript lincRNA MGP_NODShiLtJ_T0018174.1 MGP_NODShiLtJ_G0015520.1 mouse_genomes_project 7 4083321 4089957 - Gm44015 processed_transcript retained_intron MGP_NODShiLtJ_T0015673.1 MGP_NODShiLtJ_G0013781.1 mouse_genomes_project 7 44828807 44829062 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008956.1 MGP_NODShiLtJ_G0007202.1 mouse_genomes_project 7 143968335 143970749 - Gm45121 lincRNA lincRNA MGP_NODShiLtJ_T0080813.1 MGP_NODShiLtJ_G0031326.1 mouse_genomes_project 7 213261 222451 + MGP_NODShiLtJ_P0080813 Myadm protein_coding protein_coding MGP_NODShiLtJ_T0080815.1 MGP_NODShiLtJ_G0031326.1 mouse_genomes_project 7 214715 223516 + MGP_NODShiLtJ_P0080815 Myadm protein_coding protein_coding MGP_NODShiLtJ_T0080816.1 MGP_NODShiLtJ_G0031326.1 mouse_genomes_project 7 214756 224609 + MGP_NODShiLtJ_P0080816 Myadm protein_coding protein_coding MGP_NODShiLtJ_T0080817.1 MGP_NODShiLtJ_G0031326.1 mouse_genomes_project 7 215671 221133 + MGP_NODShiLtJ_P0080817 Myadm protein_coding protein_coding MGP_NODShiLtJ_T0080818.1 MGP_NODShiLtJ_G0031326.1 mouse_genomes_project 7 217276 223489 + MGP_NODShiLtJ_P0080818 Myadm protein_coding protein_coding MGP_NODShiLtJ_T0083744.1 MGP_NODShiLtJ_G0032122.1 mouse_genomes_project 7 55682590 55737685 + MGP_NODShiLtJ_P0083744 Slc17a6 protein_coding protein_coding MGP_NODShiLtJ_T0086760.1 MGP_NODShiLtJ_G0032912.1 mouse_genomes_project 7 147040917 147076751 + MGP_NODShiLtJ_P0086760 Acadsb protein_coding protein_coding MGP_NODShiLtJ_T0086761.1 MGP_NODShiLtJ_G0032912.1 mouse_genomes_project 7 147041019 147075303 + MGP_NODShiLtJ_P0086761 Acadsb protein_coding protein_coding MGP_NODShiLtJ_T0086762.1 MGP_NODShiLtJ_G0032912.1 mouse_genomes_project 7 147054322 147059876 + Acadsb protein_coding retained_intron MGP_NODShiLtJ_T0086763.1 MGP_NODShiLtJ_G0032912.1 mouse_genomes_project 7 147054357 147058676 + Acadsb protein_coding retained_intron MGP_NODShiLtJ_T0086764.1 MGP_NODShiLtJ_G0032912.1 mouse_genomes_project 7 147058469 147062053 + Acadsb protein_coding retained_intron MGP_NODShiLtJ_T0086765.1 MGP_NODShiLtJ_G0032912.1 mouse_genomes_project 7 147059696 147076749 + Acadsb protein_coding retained_intron MGP_NODShiLtJ_T0086766.1 MGP_NODShiLtJ_G0032912.1 mouse_genomes_project 7 147064156 147068035 + Acadsb protein_coding retained_intron MGP_NODShiLtJ_T0015751.1 MGP_NODShiLtJ_G0013859.1 mouse_genomes_project 7 106983993 106984359 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010749.1 MGP_NODShiLtJ_G0008882.1 mouse_genomes_project 7 29605430 29605489 - Mir1963 miRNA miRNA MGP_NODShiLtJ_T0005238.1 MGP_NODShiLtJ_G0004439.1 mouse_genomes_project 7 142853983 142854529 - 1700120K04Rik antisense antisense MGP_NODShiLtJ_T0083275.1 MGP_NODShiLtJ_G0031991.1 mouse_genomes_project 7 47419729 47421000 + MGP_NODShiLtJ_P0083275 protein_coding protein_coding MGP_NODShiLtJ_T0081014.1 MGP_NODShiLtJ_G0031364.1 mouse_genomes_project 7 1734621 1765496 - MGP_NODShiLtJ_P0081014 Ppp6r1 protein_coding protein_coding MGP_NODShiLtJ_T0081015.1 MGP_NODShiLtJ_G0031364.1 mouse_genomes_project 7 1740531 1747414 - Ppp6r1 protein_coding retained_intron MGP_NODShiLtJ_T0081016.1 MGP_NODShiLtJ_G0031364.1 mouse_genomes_project 7 1747808 1765467 - Ppp6r1 protein_coding retained_intron MGP_NODShiLtJ_T0081017.1 MGP_NODShiLtJ_G0031364.1 mouse_genomes_project 7 1748546 1750439 - MGP_NODShiLtJ_P0081017 Ppp6r1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081018.1 MGP_NODShiLtJ_G0031364.1 mouse_genomes_project 7 1749387 1754566 - MGP_NODShiLtJ_P0081018 Ppp6r1 protein_coding protein_coding MGP_NODShiLtJ_T0081019.1 MGP_NODShiLtJ_G0031364.1 mouse_genomes_project 7 1750391 1765458 - MGP_NODShiLtJ_P0081019 Ppp6r1 protein_coding protein_coding MGP_NODShiLtJ_T0085869.1 MGP_NODShiLtJ_G0032746.1 mouse_genomes_project 7 135793242 135795087 - MGP_NODShiLtJ_P0085869 protein_coding protein_coding MGP_NODShiLtJ_T0018256.1 MGP_NODShiLtJ_G0015557.1 mouse_genomes_project 7 142111552 142122270 + Gm21984 processed_transcript processed_transcript MGP_NODShiLtJ_T0005200.1 MGP_NODShiLtJ_G0004413.1 mouse_genomes_project 7 108431071 108436927 - Gm15416 antisense antisense MGP_NODShiLtJ_T0085348.1 MGP_NODShiLtJ_G0032576.1 mouse_genomes_project 7 119868145 119869093 - MGP_NODShiLtJ_P0085348 Olfr694 protein_coding protein_coding MGP_NODShiLtJ_T0085077.1 MGP_NODShiLtJ_G0032422.1 mouse_genomes_project 7 114671420 114672371 + MGP_NODShiLtJ_P0085077 Olfr549 protein_coding protein_coding MGP_NODShiLtJ_T0087318.1 MGP_NODShiLtJ_G0033057.1 mouse_genomes_project 7 158681103 158683189 - MGP_NODShiLtJ_P0087318 Krtap5-1 protein_coding protein_coding MGP_NODShiLtJ_T0083917.1 MGP_NODShiLtJ_G0032160.1 mouse_genomes_project 7 72173593 72215498 + Tarsl2 protein_coding retained_intron MGP_NODShiLtJ_T0083918.1 MGP_NODShiLtJ_G0032160.1 mouse_genomes_project 7 72173593 72223775 + MGP_NODShiLtJ_P0083918 Tarsl2 protein_coding protein_coding MGP_NODShiLtJ_T0083919.1 MGP_NODShiLtJ_G0032160.1 mouse_genomes_project 7 72187733 72191582 + Tarsl2 protein_coding retained_intron MGP_NODShiLtJ_T0083920.1 MGP_NODShiLtJ_G0032160.1 mouse_genomes_project 7 72209716 72221766 + Tarsl2 protein_coding processed_transcript MGP_NODShiLtJ_T0008719.1 MGP_NODShiLtJ_G0007035.1 mouse_genomes_project 7 373047 374828 - 3300002P13Rik lincRNA lincRNA MGP_NODShiLtJ_T0084838.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112278272 112383081 + MGP_NODShiLtJ_P0084838 C2cd3 protein_coding protein_coding MGP_NODShiLtJ_T0084839.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112278272 112383770 + MGP_NODShiLtJ_P0084839 C2cd3 protein_coding protein_coding MGP_NODShiLtJ_T0084840.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112278285 112334315 + MGP_NODShiLtJ_P0084840 C2cd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084841.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112278320 112318135 + C2cd3 protein_coding retained_intron MGP_NODShiLtJ_T0084842.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112304924 112365956 + MGP_NODShiLtJ_P0084842 C2cd3 protein_coding protein_coding MGP_NODShiLtJ_T0084843.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112331447 112334043 + C2cd3 protein_coding retained_intron MGP_NODShiLtJ_T0084844.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112340085 112343255 + MGP_NODShiLtJ_P0084844 C2cd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084845.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112341113 112383772 + MGP_NODShiLtJ_P0084845 C2cd3 protein_coding protein_coding MGP_NODShiLtJ_T0084846.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112354972 112356376 + C2cd3 protein_coding retained_intron MGP_NODShiLtJ_T0084847.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112360323 112366345 + MGP_NODShiLtJ_P0084847 C2cd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084848.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112362852 112366304 + C2cd3 protein_coding retained_intron MGP_NODShiLtJ_T0084849.1 MGP_NODShiLtJ_G0032376.1 mouse_genomes_project 7 112377827 112383772 + MGP_NODShiLtJ_P0084849 C2cd3 protein_coding protein_coding MGP_NODShiLtJ_T0102122.1 MGP_NODShiLtJ_G0040288.1 mouse_genomes_project 7 34913998 34915180 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082683.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31471518 31474958 + Krtdap protein_coding retained_intron MGP_NODShiLtJ_T0082684.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31471527 31476262 + MGP_NODShiLtJ_P0082684 Krtdap protein_coding protein_coding MGP_NODShiLtJ_T0082685.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31471527 31476278 + MGP_NODShiLtJ_P0082685 Krtdap protein_coding protein_coding MGP_NODShiLtJ_T0082686.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31471527 31476284 + MGP_NODShiLtJ_P0082686 Krtdap protein_coding protein_coding MGP_NODShiLtJ_T0082687.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31471527 31476292 + MGP_NODShiLtJ_P0082687 Krtdap protein_coding protein_coding MGP_NODShiLtJ_T0082688.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31471527 31476280 + MGP_NODShiLtJ_P0082688 Krtdap protein_coding protein_coding MGP_NODShiLtJ_T0082689.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31474996 31476280 + Krtdap protein_coding retained_intron MGP_NODShiLtJ_T0082690.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31475048 31476278 + Krtdap protein_coding retained_intron MGP_NODShiLtJ_T0082691.1 MGP_NODShiLtJ_G0031859.1 mouse_genomes_project 7 31475681 31476280 + Krtdap protein_coding retained_intron MGP_NODShiLtJ_T0084186.1 MGP_NODShiLtJ_G0032207.1 mouse_genomes_project 7 87700196 87725942 - MGP_NODShiLtJ_P0084186 Rhcg protein_coding protein_coding MGP_NODShiLtJ_T0084187.1 MGP_NODShiLtJ_G0032207.1 mouse_genomes_project 7 87700202 87701763 - MGP_NODShiLtJ_P0084187 Rhcg protein_coding protein_coding MGP_NODShiLtJ_T0084188.1 MGP_NODShiLtJ_G0032207.1 mouse_genomes_project 7 87712059 87716165 - MGP_NODShiLtJ_P0084188 Rhcg protein_coding protein_coding MGP_NODShiLtJ_T0010768.1 MGP_NODShiLtJ_G0008901.1 mouse_genomes_project 7 58812389 58812576 - Gm25956 miRNA miRNA MGP_NODShiLtJ_T0015698.1 MGP_NODShiLtJ_G0013806.1 mouse_genomes_project 7 60551379 60551737 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081162.1 MGP_NODShiLtJ_G0031418.1 mouse_genomes_project 7 3875319 3876376 + MGP_NODShiLtJ_P0081162 Olfr1346 protein_coding protein_coding MGP_NODShiLtJ_T0002197.1 MGP_NODShiLtJ_G0002109.1 mouse_genomes_project 7 70722885 70723486 + TEC TEC MGP_NODShiLtJ_T0085164.1 MGP_NODShiLtJ_G0032503.1 mouse_genomes_project 7 116614782 116615727 - MGP_NODShiLtJ_P0085164 protein_coding protein_coding MGP_NODShiLtJ_T0008841.1 MGP_NODShiLtJ_G0007133.1 mouse_genomes_project 7 81049079 81049636 - lincRNA lincRNA MGP_NODShiLtJ_T0087018.1 MGP_NODShiLtJ_G0032978.1 mouse_genomes_project 7 156386393 156399042 + MGP_NODShiLtJ_P0087018 Cd163l1 protein_coding protein_coding MGP_NODShiLtJ_T0086527.1 MGP_NODShiLtJ_G0032867.1 mouse_genomes_project 7 143148109 143150405 + Zfp646 protein_coding retained_intron MGP_NODShiLtJ_T0086528.1 MGP_NODShiLtJ_G0032867.1 mouse_genomes_project 7 143148684 143152077 + MGP_NODShiLtJ_P0086528 Zfp646 protein_coding protein_coding MGP_NODShiLtJ_T0086529.1 MGP_NODShiLtJ_G0032867.1 mouse_genomes_project 7 143149589 143157885 + MGP_NODShiLtJ_P0086529 Zfp646 protein_coding protein_coding MGP_NODShiLtJ_T0086530.1 MGP_NODShiLtJ_G0032867.1 mouse_genomes_project 7 143151199 143157881 + MGP_NODShiLtJ_P0086530 Zfp646 protein_coding protein_coding MGP_NODShiLtJ_T0080950.1 MGP_NODShiLtJ_G0031354.1 mouse_genomes_project 7 1434020 1472812 - MGP_NODShiLtJ_P0080950 Gp6 protein_coding protein_coding MGP_NODShiLtJ_T0080951.1 MGP_NODShiLtJ_G0031354.1 mouse_genomes_project 7 1438916 1472796 - MGP_NODShiLtJ_P0080951 Gp6 protein_coding protein_coding MGP_NODShiLtJ_T0081723.1 MGP_NODShiLtJ_G0031611.1 mouse_genomes_project 7 19414060 19415223 + MGP_NODShiLtJ_P0081723 protein_coding protein_coding MGP_NODShiLtJ_T0086430.1 MGP_NODShiLtJ_G0032850.1 mouse_genomes_project 7 142760727 142815100 + MGP_NODShiLtJ_P0086430 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086432.1 MGP_NODShiLtJ_G0032850.1 mouse_genomes_project 7 142805509 142811263 + MGP_NODShiLtJ_P0086432 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086551.1 MGP_NODShiLtJ_G0032874.1 mouse_genomes_project 7 143206249 143209131 - Prss36 protein_coding processed_transcript MGP_NODShiLtJ_T0086552.1 MGP_NODShiLtJ_G0032874.1 mouse_genomes_project 7 143206249 143209091 - Prss36 protein_coding processed_transcript MGP_NODShiLtJ_T0086553.1 MGP_NODShiLtJ_G0032874.1 mouse_genomes_project 7 143206249 143233658 - MGP_NODShiLtJ_P0086553 Prss36 protein_coding protein_coding MGP_NODShiLtJ_T0086554.1 MGP_NODShiLtJ_G0032874.1 mouse_genomes_project 7 143206249 143233658 - MGP_NODShiLtJ_P0086554 Prss36 protein_coding protein_coding MGP_NODShiLtJ_T0086555.1 MGP_NODShiLtJ_G0032874.1 mouse_genomes_project 7 143206410 143209062 - MGP_NODShiLtJ_P0086555 Prss36 protein_coding protein_coding MGP_NODShiLtJ_T0086556.1 MGP_NODShiLtJ_G0032874.1 mouse_genomes_project 7 143206513 143209041 - MGP_NODShiLtJ_P0086556 Prss36 protein_coding protein_coding MGP_NODShiLtJ_T0086557.1 MGP_NODShiLtJ_G0032874.1 mouse_genomes_project 7 143206571 143209709 - Prss36 protein_coding retained_intron MGP_NODShiLtJ_T0086558.1 MGP_NODShiLtJ_G0032874.1 mouse_genomes_project 7 143206618 143209126 - Prss36 protein_coding processed_transcript MGP_NODShiLtJ_T0098082.1 MGP_NODShiLtJ_G0036494.1 mouse_genomes_project 7 100545583 100545696 + n-R5s155 rRNA rRNA MGP_NODShiLtJ_T0005202.1 MGP_NODShiLtJ_G0004415.1 mouse_genomes_project 7 109257442 109307655 - Rsf1os1 antisense antisense MGP_NODShiLtJ_T0082191.1 MGP_NODShiLtJ_G0031740.1 mouse_genomes_project 7 28281556 28306460 - MGP_NODShiLtJ_P0082191 protein_coding protein_coding MGP_NODShiLtJ_T0082192.1 MGP_NODShiLtJ_G0031740.1 mouse_genomes_project 7 28288831 28389376 - MGP_NODShiLtJ_P0082192 protein_coding protein_coding MGP_NODShiLtJ_T0081745.1 MGP_NODShiLtJ_G0031629.1 mouse_genomes_project 7 23806460 23824707 + MGP_NODShiLtJ_P0081745 Zfp112 protein_coding protein_coding MGP_NODShiLtJ_T0081746.1 MGP_NODShiLtJ_G0031629.1 mouse_genomes_project 7 23806468 23824248 + MGP_NODShiLtJ_P0081746 Zfp112 protein_coding protein_coding MGP_NODShiLtJ_T0081747.1 MGP_NODShiLtJ_G0031629.1 mouse_genomes_project 7 23806504 23809433 + Zfp112 protein_coding retained_intron MGP_NODShiLtJ_T0081748.1 MGP_NODShiLtJ_G0031629.1 mouse_genomes_project 7 23806523 23830795 + MGP_NODShiLtJ_P0081748 Zfp112 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0081651.1 MGP_NODShiLtJ_G0031590.1 mouse_genomes_project 7 18918436 18924764 + MGP_NODShiLtJ_P0081651 Nkpd1 protein_coding protein_coding MGP_NODShiLtJ_T0101397.1 MGP_NODShiLtJ_G0039605.1 mouse_genomes_project 7 43694993 44323094 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101398.1 MGP_NODShiLtJ_G0039605.1 mouse_genomes_project 7 43696431 43740564 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101399.1 MGP_NODShiLtJ_G0039605.1 mouse_genomes_project 7 43696453 43788096 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0005229.1 MGP_NODShiLtJ_G0004431.1 mouse_genomes_project 7 136965185 136987338 - Gm15489 antisense antisense MGP_NODShiLtJ_T0086417.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142750239 142768605 + Srcap protein_coding retained_intron MGP_NODShiLtJ_T0086418.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142750239 142774197 + MGP_NODShiLtJ_P0086418 Srcap protein_coding protein_coding MGP_NODShiLtJ_T0086419.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142750258 142764401 + MGP_NODShiLtJ_P0086419 Srcap protein_coding protein_coding MGP_NODShiLtJ_T0086420.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142750283 142766874 + MGP_NODShiLtJ_P0086420 Srcap protein_coding protein_coding MGP_NODShiLtJ_T0086421.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142750368 142753613 + Srcap protein_coding processed_transcript MGP_NODShiLtJ_T0086422.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142750557 142754188 + Srcap protein_coding processed_transcript MGP_NODShiLtJ_T0086423.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142750721 142784113 + MGP_NODShiLtJ_P0086423 Srcap protein_coding protein_coding MGP_NODShiLtJ_T0086424.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142751248 142781253 + Srcap protein_coding retained_intron MGP_NODShiLtJ_T0086425.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142751248 142781253 + MGP_NODShiLtJ_P0086425 Srcap protein_coding protein_coding MGP_NODShiLtJ_T0086426.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142751274 142809279 + MGP_NODShiLtJ_P0086426 Srcap protein_coding protein_coding MGP_NODShiLtJ_T0086427.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142754184 142761113 + Srcap protein_coding retained_intron MGP_NODShiLtJ_T0086428.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142754339 142806194 + MGP_NODShiLtJ_P0086428 Srcap protein_coding protein_coding MGP_NODShiLtJ_T0086429.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142754339 142806194 + MGP_NODShiLtJ_P0086429 Srcap protein_coding protein_coding MGP_NODShiLtJ_T0086431.1 MGP_NODShiLtJ_G0032849.1 mouse_genomes_project 7 142778638 142780670 + Srcap protein_coding retained_intron MGP_NODShiLtJ_T0015596.1 MGP_NODShiLtJ_G0013704.1 mouse_genomes_project 7 16758168 16758635 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002174.1 MGP_NODShiLtJ_G0002086.1 mouse_genomes_project 7 42574264 42575812 - TEC TEC MGP_NODShiLtJ_T0084768.1 MGP_NODShiLtJ_G0032352.1 mouse_genomes_project 7 110668557 110933980 - MGP_NODShiLtJ_P0084768 Uvrag protein_coding protein_coding MGP_NODShiLtJ_T0102113.1 MGP_NODShiLtJ_G0040279.1 mouse_genomes_project 7 32031565 32033751 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015586.1 MGP_NODShiLtJ_G0013694.1 mouse_genomes_project 7 12886788 12890382 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008722.1 MGP_NODShiLtJ_G0007038.1 mouse_genomes_project 7 934561 941372 - lincRNA lincRNA MGP_NODShiLtJ_T0005216.1 MGP_NODShiLtJ_G0004423.1 mouse_genomes_project 7 130227354 130246154 + Gm45025 antisense antisense MGP_NODShiLtJ_T0015802.1 MGP_NODShiLtJ_G0013910.1 mouse_genomes_project 7 142637958 142638130 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015643.1 MGP_NODShiLtJ_G0013751.1 mouse_genomes_project 7 34703549 34704276 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002229.1 MGP_NODShiLtJ_G0002140.1 mouse_genomes_project 7 87617730 87618067 + TEC TEC MGP_NODShiLtJ_T0085931.1 MGP_NODShiLtJ_G0032763.1 mouse_genomes_project 7 137054938 137058248 + MGP_NODShiLtJ_P0085931 Chp2 protein_coding protein_coding MGP_NODShiLtJ_T0085932.1 MGP_NODShiLtJ_G0032763.1 mouse_genomes_project 7 137056996 137057607 + Chp2 protein_coding processed_transcript MGP_NODShiLtJ_T0015604.1 MGP_NODShiLtJ_G0013712.1 mouse_genomes_project 7 24039085 24039484 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081370.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15015288 15020747 + MGP_NODShiLtJ_P0081370 Meis3 protein_coding protein_coding MGP_NODShiLtJ_T0081371.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15015337 15020745 + MGP_NODShiLtJ_P0081371 Meis3 protein_coding protein_coding MGP_NODShiLtJ_T0081372.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15015473 15029753 + MGP_NODShiLtJ_P0081372 Meis3 protein_coding protein_coding MGP_NODShiLtJ_T0081373.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15015586 15029750 + Meis3 protein_coding retained_intron MGP_NODShiLtJ_T0081374.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15015628 15029753 + MGP_NODShiLtJ_P0081374 Meis3 protein_coding protein_coding MGP_NODShiLtJ_T0081375.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15015628 15029753 + MGP_NODShiLtJ_P0081375 Meis3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081376.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15019652 15020388 + Meis3 protein_coding retained_intron MGP_NODShiLtJ_T0081377.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15020996 15028764 + MGP_NODShiLtJ_P0081377 Meis3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081378.1 MGP_NODShiLtJ_G0031508.1 mouse_genomes_project 7 15027338 15029753 + Meis3 protein_coding retained_intron MGP_NODShiLtJ_T0087359.1 MGP_NODShiLtJ_G0033065.1 mouse_genomes_project 7 158957566 158973256 - MGP_NODShiLtJ_P0087359 protein_coding protein_coding MGP_NODShiLtJ_T0087360.1 MGP_NODShiLtJ_G0033065.1 mouse_genomes_project 7 158959242 158963464 - protein_coding processed_transcript MGP_NODShiLtJ_T0099526.1 MGP_NODShiLtJ_G0037920.1 mouse_genomes_project 7 144115807 144115909 + Gm23783 snRNA snRNA MGP_NODShiLtJ_T0015714.1 MGP_NODShiLtJ_G0013822.1 mouse_genomes_project 7 76061260 76062263 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083225.1 MGP_NODShiLtJ_G0031981.1 mouse_genomes_project 7 47194835 47201428 - MGP_NODShiLtJ_P0083225 Emc10 protein_coding protein_coding MGP_NODShiLtJ_T0083226.1 MGP_NODShiLtJ_G0031981.1 mouse_genomes_project 7 47195009 47201305 - MGP_NODShiLtJ_P0083226 Emc10 protein_coding protein_coding MGP_NODShiLtJ_T0083227.1 MGP_NODShiLtJ_G0031981.1 mouse_genomes_project 7 47195805 47196915 - Emc10 protein_coding retained_intron MGP_NODShiLtJ_T0083228.1 MGP_NODShiLtJ_G0031981.1 mouse_genomes_project 7 47196631 47201362 - Emc10 protein_coding retained_intron MGP_NODShiLtJ_T0083229.1 MGP_NODShiLtJ_G0031981.1 mouse_genomes_project 7 47196899 47201327 - MGP_NODShiLtJ_P0083229 Emc10 protein_coding protein_coding MGP_NODShiLtJ_T0083230.1 MGP_NODShiLtJ_G0031981.1 mouse_genomes_project 7 47199172 47201296 - Emc10 protein_coding retained_intron MGP_NODShiLtJ_T0085880.1 MGP_NODShiLtJ_G0032751.1 mouse_genomes_project 7 136441958 136509922 - MGP_NODShiLtJ_P0085880 Usp31 protein_coding protein_coding MGP_NODShiLtJ_T0085881.1 MGP_NODShiLtJ_G0032751.1 mouse_genomes_project 7 136458704 136467475 - Usp31 protein_coding retained_intron MGP_NODShiLtJ_T0100761.1 MGP_NODShiLtJ_G0039155.1 mouse_genomes_project 7 103892291 103892417 - Gm25860 snoRNA snoRNA MGP_NODShiLtJ_T0084523.1 MGP_NODShiLtJ_G0032295.1 mouse_genomes_project 7 96499741 96642567 + MGP_NODShiLtJ_P0084523 Vmn2r77 protein_coding protein_coding MGP_NODShiLtJ_T0082515.1 MGP_NODShiLtJ_G0031824.1 mouse_genomes_project 7 30920883 30932197 + MGP_NODShiLtJ_P0082515 protein_coding protein_coding MGP_NODShiLtJ_T0085151.1 MGP_NODShiLtJ_G0032490.1 mouse_genomes_project 7 116295785 116297314 - MGP_NODShiLtJ_P0085151 Hbb-bh1 protein_coding protein_coding MGP_NODShiLtJ_T0081200.1 MGP_NODShiLtJ_G0031444.1 mouse_genomes_project 7 9900652 9901570 + MGP_NODShiLtJ_P0081200 Vmn1r75 protein_coding protein_coding MGP_NODShiLtJ_T0002244.1 MGP_NODShiLtJ_G0002155.1 mouse_genomes_project 7 136041511 136042143 - TEC TEC MGP_NODShiLtJ_T0085687.1 MGP_NODShiLtJ_G0032700.1 mouse_genomes_project 7 130831890 130870404 + MGP_NODShiLtJ_P0085687 Nucb2 protein_coding protein_coding MGP_NODShiLtJ_T0085688.1 MGP_NODShiLtJ_G0032700.1 mouse_genomes_project 7 130831905 130837445 + Nucb2 protein_coding processed_transcript MGP_NODShiLtJ_T0085689.1 MGP_NODShiLtJ_G0032700.1 mouse_genomes_project 7 130831936 130870263 + MGP_NODShiLtJ_P0085689 Nucb2 protein_coding protein_coding MGP_NODShiLtJ_T0085690.1 MGP_NODShiLtJ_G0032700.1 mouse_genomes_project 7 130859546 130866768 + MGP_NODShiLtJ_P0085690 Nucb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099521.1 MGP_NODShiLtJ_G0037915.1 mouse_genomes_project 7 138902853 138902959 - Gm23788 snRNA snRNA MGP_NODShiLtJ_T0084540.1 MGP_NODShiLtJ_G0032301.1 mouse_genomes_project 7 98388091 98426615 + MGP_NODShiLtJ_P0084540 Ctsc protein_coding protein_coding MGP_NODShiLtJ_T0084541.1 MGP_NODShiLtJ_G0032301.1 mouse_genomes_project 7 98388140 98423748 + MGP_NODShiLtJ_P0084541 Ctsc protein_coding protein_coding MGP_NODShiLtJ_T0084542.1 MGP_NODShiLtJ_G0032301.1 mouse_genomes_project 7 98388144 98394910 + Ctsc protein_coding retained_intron MGP_NODShiLtJ_T0084543.1 MGP_NODShiLtJ_G0032301.1 mouse_genomes_project 7 98388144 98404523 + Ctsc protein_coding retained_intron MGP_NODShiLtJ_T0084544.1 MGP_NODShiLtJ_G0032301.1 mouse_genomes_project 7 98410650 98418033 + Ctsc protein_coding retained_intron MGP_NODShiLtJ_T0102105.1 MGP_NODShiLtJ_G0040272.1 mouse_genomes_project 7 23414186 23415076 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0083690.1 MGP_NODShiLtJ_G0032107.1 mouse_genomes_project 7 52193628 52215950 - MGP_NODShiLtJ_P0083690 Mrgprb1 protein_coding protein_coding MGP_NODShiLtJ_T0083691.1 MGP_NODShiLtJ_G0032107.1 mouse_genomes_project 7 52200691 52215903 - MGP_NODShiLtJ_P0083691 Mrgprb1 protein_coding protein_coding MGP_NODShiLtJ_T0083692.1 MGP_NODShiLtJ_G0032107.1 mouse_genomes_project 7 52200920 52215854 - MGP_NODShiLtJ_P0083692 Mrgprb1 protein_coding protein_coding MGP_NODShiLtJ_T0086981.1 MGP_NODShiLtJ_G0032967.1 mouse_genomes_project 7 156193912 156196845 - MGP_NODShiLtJ_P0086981 Msx3 protein_coding protein_coding MGP_NODShiLtJ_T0086982.1 MGP_NODShiLtJ_G0032967.1 mouse_genomes_project 7 156194129 156196844 - MGP_NODShiLtJ_P0086982 Msx3 protein_coding protein_coding MGP_NODShiLtJ_T0084388.1 MGP_NODShiLtJ_G0032243.1 mouse_genomes_project 7 89496282 89627220 + MGP_NODShiLtJ_P0084388 Pde8a protein_coding protein_coding MGP_NODShiLtJ_T0084389.1 MGP_NODShiLtJ_G0032243.1 mouse_genomes_project 7 89587403 89607693 + Pde8a protein_coding processed_transcript MGP_NODShiLtJ_T0084390.1 MGP_NODShiLtJ_G0032243.1 mouse_genomes_project 7 89599216 89612139 + Pde8a protein_coding processed_transcript MGP_NODShiLtJ_T0002276.1 MGP_NODShiLtJ_G0002187.1 mouse_genomes_project 7 161380374 161381718 + TEC TEC MGP_NODShiLtJ_T0086668.1 MGP_NODShiLtJ_G0032895.1 mouse_genomes_project 7 144680983 144840344 + MGP_NODShiLtJ_P0086668 Plpp4 protein_coding protein_coding MGP_NODShiLtJ_T0086669.1 MGP_NODShiLtJ_G0032895.1 mouse_genomes_project 7 144680990 144763103 + Plpp4 protein_coding retained_intron MGP_NODShiLtJ_T0086670.1 MGP_NODShiLtJ_G0032895.1 mouse_genomes_project 7 144680999 144747165 + Plpp4 protein_coding processed_transcript MGP_NODShiLtJ_T0086671.1 MGP_NODShiLtJ_G0032895.1 mouse_genomes_project 7 144681001 144840239 + MGP_NODShiLtJ_P0086671 Plpp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086672.1 MGP_NODShiLtJ_G0032895.1 mouse_genomes_project 7 144747144 144840351 + MGP_NODShiLtJ_P0086672 Plpp4 protein_coding protein_coding MGP_NODShiLtJ_T0086289.1 MGP_NODShiLtJ_G0032819.1 mouse_genomes_project 7 142145846 142149910 + MGP_NODShiLtJ_P0086289 Cdipt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086290.1 MGP_NODShiLtJ_G0032819.1 mouse_genomes_project 7 142145868 142149912 + MGP_NODShiLtJ_P0086290 Cdipt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086291.1 MGP_NODShiLtJ_G0032819.1 mouse_genomes_project 7 142145998 142149062 + MGP_NODShiLtJ_P0086291 Cdipt protein_coding protein_coding MGP_NODShiLtJ_T0086292.1 MGP_NODShiLtJ_G0032819.1 mouse_genomes_project 7 142146140 142149448 + MGP_NODShiLtJ_P0086292 Cdipt protein_coding protein_coding MGP_NODShiLtJ_T0086293.1 MGP_NODShiLtJ_G0032819.1 mouse_genomes_project 7 142146174 142149916 + MGP_NODShiLtJ_P0086293 Cdipt protein_coding protein_coding MGP_NODShiLtJ_T0086294.1 MGP_NODShiLtJ_G0032819.1 mouse_genomes_project 7 142147643 142148886 + Cdipt protein_coding retained_intron MGP_NODShiLtJ_T0082186.1 MGP_NODShiLtJ_G0031737.1 mouse_genomes_project 7 28132228 28253721 + MGP_NODShiLtJ_P0082186 Zfp607a protein_coding protein_coding MGP_NODShiLtJ_T0082190.1 MGP_NODShiLtJ_G0031737.1 mouse_genomes_project 7 28221904 28253863 + MGP_NODShiLtJ_P0082190 Zfp607a protein_coding protein_coding MGP_NODShiLtJ_T0082263.1 MGP_NODShiLtJ_G0031762.1 mouse_genomes_project 7 28887789 28897439 + MGP_NODShiLtJ_P0082263 Lrfn1 protein_coding protein_coding MGP_NODShiLtJ_T0082264.1 MGP_NODShiLtJ_G0031762.1 mouse_genomes_project 7 28887957 28900213 + MGP_NODShiLtJ_P0082264 Lrfn1 protein_coding protein_coding MGP_NODShiLtJ_T0082265.1 MGP_NODShiLtJ_G0031762.1 mouse_genomes_project 7 28888047 28898565 + Lrfn1 protein_coding retained_intron MGP_NODShiLtJ_T0082266.1 MGP_NODShiLtJ_G0031762.1 mouse_genomes_project 7 28896811 28900148 + MGP_NODShiLtJ_P0082266 Lrfn1 protein_coding protein_coding MGP_NODShiLtJ_T0082267.1 MGP_NODShiLtJ_G0031762.1 mouse_genomes_project 7 28896811 28906326 + MGP_NODShiLtJ_P0082267 Lrfn1 protein_coding protein_coding MGP_NODShiLtJ_T0084219.1 MGP_NODShiLtJ_G0032216.1 mouse_genomes_project 7 88002082 88048908 - MGP_NODShiLtJ_P0084219 Ap3s2 protein_coding protein_coding MGP_NODShiLtJ_T0084220.1 MGP_NODShiLtJ_G0032216.1 mouse_genomes_project 7 88009267 88048855 - MGP_NODShiLtJ_P0084220 Ap3s2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082996.1 MGP_NODShiLtJ_G0031916.1 mouse_genomes_project 7 39373207 39437296 - MGP_NODShiLtJ_P0082996 Uri1 protein_coding protein_coding MGP_NODShiLtJ_T0082997.1 MGP_NODShiLtJ_G0031916.1 mouse_genomes_project 7 39373208 39382784 - Uri1 protein_coding processed_transcript MGP_NODShiLtJ_T0082998.1 MGP_NODShiLtJ_G0031916.1 mouse_genomes_project 7 39373857 39437320 - MGP_NODShiLtJ_P0082998 Uri1 protein_coding protein_coding MGP_NODShiLtJ_T0082999.1 MGP_NODShiLtJ_G0031916.1 mouse_genomes_project 7 39374516 39375744 - MGP_NODShiLtJ_P0082999 Uri1 protein_coding protein_coding MGP_NODShiLtJ_T0083000.1 MGP_NODShiLtJ_G0031916.1 mouse_genomes_project 7 39374579 39441323 - MGP_NODShiLtJ_P0083000 Uri1 protein_coding protein_coding MGP_NODShiLtJ_T0083001.1 MGP_NODShiLtJ_G0031916.1 mouse_genomes_project 7 39378453 39378983 - Uri1 protein_coding processed_transcript MGP_NODShiLtJ_T0083002.1 MGP_NODShiLtJ_G0031916.1 mouse_genomes_project 7 39382760 39437276 - MGP_NODShiLtJ_P0083002 Uri1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015803.1 MGP_NODShiLtJ_G0013911.1 mouse_genomes_project 7 143314432 143315211 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085140.1 MGP_NODShiLtJ_G0032481.1 mouse_genomes_project 7 116012064 116013018 - MGP_NODShiLtJ_P0085140 Olfr623 protein_coding protein_coding MGP_NODShiLtJ_T0015549.1 MGP_NODShiLtJ_G0013657.1 mouse_genomes_project 7 15794 15954 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083269.1 MGP_NODShiLtJ_G0031988.1 mouse_genomes_project 7 47312487 47338083 + MGP_NODShiLtJ_P0083269 Kcnc3 protein_coding protein_coding MGP_NODShiLtJ_T0083270.1 MGP_NODShiLtJ_G0031988.1 mouse_genomes_project 7 47312487 47334217 + MGP_NODShiLtJ_P0083270 Kcnc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0083271.1 MGP_NODShiLtJ_G0031988.1 mouse_genomes_project 7 47312487 47338083 + MGP_NODShiLtJ_P0083271 Kcnc3 protein_coding protein_coding MGP_NODShiLtJ_T0081891.1 MGP_NODShiLtJ_G0031666.1 mouse_genomes_project 7 24834702 24906183 - MGP_NODShiLtJ_P0081891 Grik5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081892.1 MGP_NODShiLtJ_G0031666.1 mouse_genomes_project 7 24834702 24906428 - MGP_NODShiLtJ_P0081892 Grik5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081893.1 MGP_NODShiLtJ_G0031666.1 mouse_genomes_project 7 24834702 24906374 - MGP_NODShiLtJ_P0081893 Grik5 protein_coding protein_coding MGP_NODShiLtJ_T0081894.1 MGP_NODShiLtJ_G0031666.1 mouse_genomes_project 7 24877245 24891354 - Grik5 protein_coding retained_intron MGP_NODShiLtJ_T0081895.1 MGP_NODShiLtJ_G0031666.1 mouse_genomes_project 7 24892034 24898406 - Grik5 protein_coding retained_intron MGP_NODShiLtJ_T0081896.1 MGP_NODShiLtJ_G0031666.1 mouse_genomes_project 7 24892219 24892917 - Grik5 protein_coding retained_intron MGP_NODShiLtJ_T0081897.1 MGP_NODShiLtJ_G0031666.1 mouse_genomes_project 7 24901776 24906392 - Grik5 protein_coding processed_transcript MGP_NODShiLtJ_T0086610.1 MGP_NODShiLtJ_G0032886.1 mouse_genomes_project 7 143567018 143571467 + MGP_NODShiLtJ_P0086610 protein_coding protein_coding MGP_NODShiLtJ_T0102115.1 MGP_NODShiLtJ_G0040281.1 mouse_genomes_project 7 34492713 34493899 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100733.1 MGP_NODShiLtJ_G0039127.1 mouse_genomes_project 7 46928693 46928783 + Snord88c snoRNA snoRNA MGP_NODShiLtJ_T0008791.1 MGP_NODShiLtJ_G0007094.1 mouse_genomes_project 7 46911791 46922033 + Gm36864 lincRNA lincRNA MGP_NODShiLtJ_T0081180.1 MGP_NODShiLtJ_G0031428.1 mouse_genomes_project 7 4630129 4636084 - MGP_NODShiLtJ_P0081180 Zfp773 protein_coding protein_coding MGP_NODShiLtJ_T0008898.1 MGP_NODShiLtJ_G0007168.1 mouse_genomes_project 7 112358357 112389742 - Gm10603 lincRNA lincRNA MGP_NODShiLtJ_T0008899.1 MGP_NODShiLtJ_G0007168.1 mouse_genomes_project 7 112371780 112380810 - Gm10603 lincRNA lincRNA MGP_NODShiLtJ_T0008900.1 MGP_NODShiLtJ_G0007168.1 mouse_genomes_project 7 112377193 112389747 - Gm10603 lincRNA lincRNA MGP_NODShiLtJ_T0008756.1 MGP_NODShiLtJ_G0007068.1 mouse_genomes_project 7 36265776 36275464 - Gm45096 lincRNA lincRNA MGP_NODShiLtJ_T0101406.1 MGP_NODShiLtJ_G0039609.1 mouse_genomes_project 7 141837116 141839804 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0011593.1 MGP_NODShiLtJ_G0009726.1 mouse_genomes_project 7 159809123 159809347 + Gm27539 misc_RNA misc_RNA MGP_NODShiLtJ_T0002147.1 MGP_NODShiLtJ_G0002059.1 mouse_genomes_project 7 263406 263741 + TEC TEC MGP_NODShiLtJ_T0086968.1 MGP_NODShiLtJ_G0032963.1 mouse_genomes_project 7 156124450 156131495 - 6430531B16Rik protein_coding retained_intron MGP_NODShiLtJ_T0086969.1 MGP_NODShiLtJ_G0032963.1 mouse_genomes_project 7 156124450 156131527 - MGP_NODShiLtJ_P0086969 6430531B16Rik protein_coding protein_coding MGP_NODShiLtJ_T0086970.1 MGP_NODShiLtJ_G0032963.1 mouse_genomes_project 7 156128267 156131495 - MGP_NODShiLtJ_P0086970 6430531B16Rik protein_coding protein_coding MGP_NODShiLtJ_T0084898.1 MGP_NODShiLtJ_G0032387.1 mouse_genomes_project 7 112882799 112911514 - MGP_NODShiLtJ_P0084898 P2ry6 protein_coding protein_coding MGP_NODShiLtJ_T0081679.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19108567 19111626 - MGP_NODShiLtJ_P0081679 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081680.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19108724 19111512 - MGP_NODShiLtJ_P0081680 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081681.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19108729 19110867 - MGP_NODShiLtJ_P0081681 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081682.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19108729 19111468 - MGP_NODShiLtJ_P0081682 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081683.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19108729 19111512 - MGP_NODShiLtJ_P0081683 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081684.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19109077 19111498 - MGP_NODShiLtJ_P0081684 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081685.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19109078 19111081 - MGP_NODShiLtJ_P0081685 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081686.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19109301 19110707 - MGP_NODShiLtJ_P0081686 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081687.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19109697 19111510 - MGP_NODShiLtJ_P0081687 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0081688.1 MGP_NODShiLtJ_G0031600.1 mouse_genomes_project 7 19109713 19110727 - MGP_NODShiLtJ_P0081688 Apoe protein_coding protein_coding MGP_NODShiLtJ_T0085169.1 MGP_NODShiLtJ_G0032508.1 mouse_genomes_project 7 116721790 116724445 - MGP_NODShiLtJ_P0085169 Ubqln3 protein_coding protein_coding MGP_NODShiLtJ_T0086007.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140705743 140775892 - MGP_NODShiLtJ_P0086007 Gtf3c1 protein_coding protein_coding MGP_NODShiLtJ_T0086008.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140705743 140775789 - MGP_NODShiLtJ_P0086008 Gtf3c1 protein_coding protein_coding MGP_NODShiLtJ_T0086009.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140708962 140714757 - Gtf3c1 protein_coding retained_intron MGP_NODShiLtJ_T0086010.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140712309 140722005 - MGP_NODShiLtJ_P0086010 Gtf3c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086011.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140729099 140775872 - Gtf3c1 protein_coding retained_intron MGP_NODShiLtJ_T0086012.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140729411 140775854 - MGP_NODShiLtJ_P0086012 Gtf3c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086013.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140729531 140737168 - MGP_NODShiLtJ_P0086013 Gtf3c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086014.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140735818 140737935 - Gtf3c1 protein_coding retained_intron MGP_NODShiLtJ_T0086015.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140759331 140767609 - Gtf3c1 protein_coding retained_intron MGP_NODShiLtJ_T0086016.1 MGP_NODShiLtJ_G0032778.1 mouse_genomes_project 7 140761340 140774648 - MGP_NODShiLtJ_P0086016 Gtf3c1 protein_coding protein_coding MGP_NODShiLtJ_T0018260.1 MGP_NODShiLtJ_G0015560.1 mouse_genomes_project 7 143750315 143752341 - Gm15503 processed_transcript retained_intron MGP_NODShiLtJ_T0018261.1 MGP_NODShiLtJ_G0015560.1 mouse_genomes_project 7 143751767 143753689 - Gm15503 processed_transcript sense_intronic MGP_NODShiLtJ_T0102166.1 MGP_NODShiLtJ_G0040332.1 mouse_genomes_project 7 93681090 93681610 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087034.1 MGP_NODShiLtJ_G0032992.1 mouse_genomes_project 7 156882449 156889998 + MGP_NODShiLtJ_P0087034 Olfr53 protein_coding protein_coding MGP_NODShiLtJ_T0005135.1 MGP_NODShiLtJ_G0004368.1 mouse_genomes_project 7 31705966 31706759 + Gm4673 antisense antisense MGP_NODShiLtJ_T0005136.1 MGP_NODShiLtJ_G0004368.1 mouse_genomes_project 7 31706313 31710524 + Gm4673 antisense antisense MGP_NODShiLtJ_T0082487.1 MGP_NODShiLtJ_G0031818.1 mouse_genomes_project 7 30816039 30817894 + MGP_NODShiLtJ_P0082487 Cox7a1 protein_coding protein_coding MGP_NODShiLtJ_T0082135.1 MGP_NODShiLtJ_G0031728.1 mouse_genomes_project 7 27785220 27810076 + MGP_NODShiLtJ_P0082135 Prx protein_coding protein_coding MGP_NODShiLtJ_T0082136.1 MGP_NODShiLtJ_G0031728.1 mouse_genomes_project 7 27785220 27810076 + MGP_NODShiLtJ_P0082136 Prx protein_coding protein_coding MGP_NODShiLtJ_T0082137.1 MGP_NODShiLtJ_G0031728.1 mouse_genomes_project 7 27797930 27809896 + MGP_NODShiLtJ_P0082137 Prx protein_coding protein_coding MGP_NODShiLtJ_T0082138.1 MGP_NODShiLtJ_G0031728.1 mouse_genomes_project 7 27797935 27809903 + MGP_NODShiLtJ_P0082138 Prx protein_coding protein_coding MGP_NODShiLtJ_T0099518.1 MGP_NODShiLtJ_G0037912.1 mouse_genomes_project 7 135782755 135782858 - Gm25924 snRNA snRNA MGP_NODShiLtJ_T0082805.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31884452 31911362 - Gramd1a protein_coding retained_intron MGP_NODShiLtJ_T0082806.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31884452 31911362 - MGP_NODShiLtJ_P0082806 Gramd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082807.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31884452 31911383 - MGP_NODShiLtJ_P0082807 Gramd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082808.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31884452 31911364 - MGP_NODShiLtJ_P0082808 Gramd1a protein_coding protein_coding MGP_NODShiLtJ_T0082809.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31884452 31911432 - MGP_NODShiLtJ_P0082809 Gramd1a protein_coding protein_coding MGP_NODShiLtJ_T0082810.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31886675 31887681 - Gramd1a protein_coding retained_intron MGP_NODShiLtJ_T0082811.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31886907 31892494 - MGP_NODShiLtJ_P0082811 Gramd1a protein_coding protein_coding MGP_NODShiLtJ_T0082812.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31887155 31898084 - MGP_NODShiLtJ_P0082812 Gramd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082813.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31889907 31894234 - MGP_NODShiLtJ_P0082813 Gramd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082814.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31894183 31911362 - MGP_NODShiLtJ_P0082814 Gramd1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082815.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31895379 31911303 - Gramd1a protein_coding retained_intron MGP_NODShiLtJ_T0082816.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31895487 31912419 - MGP_NODShiLtJ_P0082816 Gramd1a protein_coding protein_coding MGP_NODShiLtJ_T0082817.1 MGP_NODShiLtJ_G0031877.1 mouse_genomes_project 7 31896908 31916254 - MGP_NODShiLtJ_P0082817 Gramd1a protein_coding protein_coding MGP_NODShiLtJ_T0097829.1 MGP_NODShiLtJ_G0036241.1 mouse_genomes_project 7 121602179 121706208 - pseudogene pseudogene MGP_NODShiLtJ_T0083829.1 MGP_NODShiLtJ_G0032138.1 mouse_genomes_project 7 63933442 64119567 + MGP_NODShiLtJ_P0083829 Atp10a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0102134.1 MGP_NODShiLtJ_G0040300.1 mouse_genomes_project 7 46716885 46719132 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005140.1 MGP_NODShiLtJ_G0004371.1 mouse_genomes_project 7 35354248 35363832 + antisense antisense MGP_NODShiLtJ_T0008822.1 MGP_NODShiLtJ_G0007116.1 mouse_genomes_project 7 78345813 78355065 + 6030442E23Rik lincRNA lincRNA MGP_NODShiLtJ_T0002208.1 MGP_NODShiLtJ_G0002120.1 mouse_genomes_project 7 81134672 81137768 - TEC TEC MGP_NODShiLtJ_T0002209.1 MGP_NODShiLtJ_G0002120.1 mouse_genomes_project 7 81135636 81137661 - TEC TEC MGP_NODShiLtJ_T0100741.1 MGP_NODShiLtJ_G0039135.1 mouse_genomes_project 7 48193947 48194101 + Gm22478 snoRNA snoRNA MGP_NODShiLtJ_T0085232.1 MGP_NODShiLtJ_G0032548.1 mouse_genomes_project 7 118075734 118076822 - MGP_NODShiLtJ_P0085232 protein_coding protein_coding MGP_NODShiLtJ_T0018230.1 MGP_NODShiLtJ_G0015544.1 mouse_genomes_project 7 82826826 82841376 + 1500012K07Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018231.1 MGP_NODShiLtJ_G0015544.1 mouse_genomes_project 7 82826832 82854087 + 1500012K07Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018232.1 MGP_NODShiLtJ_G0015544.1 mouse_genomes_project 7 82826832 82855669 + 1500012K07Rik processed_transcript antisense MGP_NODShiLtJ_T0018225.1 MGP_NODShiLtJ_G0015542.1 mouse_genomes_project 7 80883741 80908238 - 1810026B05Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018226.1 MGP_NODShiLtJ_G0015542.1 mouse_genomes_project 7 80889994 80907990 - 1810026B05Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018227.1 MGP_NODShiLtJ_G0015542.1 mouse_genomes_project 7 80889999 80892828 - 1810026B05Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018228.1 MGP_NODShiLtJ_G0015542.1 mouse_genomes_project 7 80890200 80902461 - 1810026B05Rik processed_transcript lincRNA MGP_NODShiLtJ_T0081689.1 MGP_NODShiLtJ_G0031601.1 mouse_genomes_project 7 19113806 19128445 - MGP_NODShiLtJ_P0081689 Tomm40 protein_coding protein_coding MGP_NODShiLtJ_T0081690.1 MGP_NODShiLtJ_G0031601.1 mouse_genomes_project 7 19113824 19128432 - MGP_NODShiLtJ_P0081690 Tomm40 protein_coding protein_coding MGP_NODShiLtJ_T0081691.1 MGP_NODShiLtJ_G0031601.1 mouse_genomes_project 7 19114315 19123943 - Tomm40 protein_coding retained_intron MGP_NODShiLtJ_T0081692.1 MGP_NODShiLtJ_G0031601.1 mouse_genomes_project 7 19115374 19115850 - MGP_NODShiLtJ_P0081692 Tomm40 protein_coding protein_coding MGP_NODShiLtJ_T0081693.1 MGP_NODShiLtJ_G0031601.1 mouse_genomes_project 7 19124410 19128435 - Tomm40 protein_coding retained_intron MGP_NODShiLtJ_T0082394.1 MGP_NODShiLtJ_G0031793.1 mouse_genomes_project 7 29801593 29803465 - MGP_NODShiLtJ_P0082394 2200002D01Rik protein_coding protein_coding MGP_NODShiLtJ_T0082395.1 MGP_NODShiLtJ_G0031793.1 mouse_genomes_project 7 29802604 29803371 - 2200002D01Rik protein_coding retained_intron MGP_NODShiLtJ_T0082724.1 MGP_NODShiLtJ_G0031865.1 mouse_genomes_project 7 31647657 31649395 - MGP_NODShiLtJ_P0082724 Hamp2 protein_coding protein_coding MGP_NODShiLtJ_T0086980.1 MGP_NODShiLtJ_G0032966.1 mouse_genomes_project 7 156183192 156187419 + MGP_NODShiLtJ_P0086980 Zfp511 protein_coding protein_coding MGP_NODShiLtJ_T0080915.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145400 1151759 + Ttyh1 protein_coding processed_transcript MGP_NODShiLtJ_T0080916.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145522 1161992 + Ttyh1 protein_coding retained_intron MGP_NODShiLtJ_T0080917.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145522 1162390 + MGP_NODShiLtJ_P0080917 Ttyh1 protein_coding protein_coding MGP_NODShiLtJ_T0080918.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145525 1165014 + MGP_NODShiLtJ_P0080918 Ttyh1 protein_coding protein_coding MGP_NODShiLtJ_T0080919.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145548 1151790 + Ttyh1 protein_coding processed_transcript MGP_NODShiLtJ_T0080920.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145577 1162376 + MGP_NODShiLtJ_P0080920 Ttyh1 protein_coding protein_coding MGP_NODShiLtJ_T0080921.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145580 1151799 + MGP_NODShiLtJ_P0080921 Ttyh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080922.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145614 1154436 + MGP_NODShiLtJ_P0080922 Ttyh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080923.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1145746 1162373 + MGP_NODShiLtJ_P0080923 Ttyh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080924.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1146212 1151731 + Ttyh1 protein_coding processed_transcript MGP_NODShiLtJ_T0080925.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1148658 1162450 + Ttyh1 protein_coding retained_intron MGP_NODShiLtJ_T0080926.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1150659 1161282 + MGP_NODShiLtJ_P0080926 Ttyh1 protein_coding protein_coding MGP_NODShiLtJ_T0080927.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1151837 1160462 + Ttyh1 protein_coding processed_transcript MGP_NODShiLtJ_T0080928.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1154396 1156290 + Ttyh1 protein_coding retained_intron MGP_NODShiLtJ_T0080929.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1155416 1160240 + Ttyh1 protein_coding retained_intron MGP_NODShiLtJ_T0080930.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1156789 1158933 + Ttyh1 protein_coding retained_intron MGP_NODShiLtJ_T0080931.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1157307 1159077 + Ttyh1 protein_coding retained_intron MGP_NODShiLtJ_T0080932.1 MGP_NODShiLtJ_G0031348.1 mouse_genomes_project 7 1160072 1161015 + Ttyh1 protein_coding retained_intron MGP_NODShiLtJ_T0086835.1 MGP_NODShiLtJ_G0032929.1 mouse_genomes_project 7 149439488 149445260 - Mmp21 protein_coding retained_intron MGP_NODShiLtJ_T0086836.1 MGP_NODShiLtJ_G0032929.1 mouse_genomes_project 7 149439488 149445260 - MGP_NODShiLtJ_P0086836 Mmp21 protein_coding protein_coding MGP_NODShiLtJ_T0086837.1 MGP_NODShiLtJ_G0032929.1 mouse_genomes_project 7 149439574 149445260 - MGP_NODShiLtJ_P0086837 Mmp21 protein_coding protein_coding MGP_NODShiLtJ_T0082061.1 MGP_NODShiLtJ_G0031711.1 mouse_genomes_project 7 27409149 27417291 - MGP_NODShiLtJ_P0082061 Egln2 protein_coding protein_coding MGP_NODShiLtJ_T0082062.1 MGP_NODShiLtJ_G0031711.1 mouse_genomes_project 7 27409150 27411361 - Egln2 protein_coding processed_transcript MGP_NODShiLtJ_T0082063.1 MGP_NODShiLtJ_G0031711.1 mouse_genomes_project 7 27409479 27416902 - MGP_NODShiLtJ_P0082063 Egln2 protein_coding protein_coding MGP_NODShiLtJ_T0082064.1 MGP_NODShiLtJ_G0031711.1 mouse_genomes_project 7 27416021 27416771 - Egln2 protein_coding processed_transcript MGP_NODShiLtJ_T0085553.1 MGP_NODShiLtJ_G0032674.1 mouse_genomes_project 7 125863359 125969633 + MGP_NODShiLtJ_P0085553 Usp47 protein_coding protein_coding MGP_NODShiLtJ_T0085554.1 MGP_NODShiLtJ_G0032674.1 mouse_genomes_project 7 125863561 125969638 + MGP_NODShiLtJ_P0085554 Usp47 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0085099.1 MGP_NODShiLtJ_G0032442.1 mouse_genomes_project 7 115095387 115096356 - MGP_NODShiLtJ_P0085099 Olfr571 protein_coding protein_coding MGP_NODShiLtJ_T0102083.1 MGP_NODShiLtJ_G0040250.1 mouse_genomes_project 7 11835681 11836117 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008982.1 MGP_NODShiLtJ_G0007218.1 mouse_genomes_project 7 161516300 161519202 - Gm26793 lincRNA lincRNA MGP_NODShiLtJ_T0018183.1 MGP_NODShiLtJ_G0015527.1 mouse_genomes_project 7 31308293 31338728 - Gm21982 processed_transcript retained_intron MGP_NODShiLtJ_T0015632.1 MGP_NODShiLtJ_G0013740.1 mouse_genomes_project 7 33837877 33838435 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082701.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31581856 31596743 - MGP_NODShiLtJ_P0082701 Cd22 protein_coding protein_coding MGP_NODShiLtJ_T0082702.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31582281 31597753 - MGP_NODShiLtJ_P0082702 Cd22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082703.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31582281 31597988 - MGP_NODShiLtJ_P0082703 Cd22 protein_coding protein_coding MGP_NODShiLtJ_T0082704.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31582281 31597784 - MGP_NODShiLtJ_P0082704 Cd22 protein_coding protein_coding MGP_NODShiLtJ_T0082705.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31582283 31596210 - MGP_NODShiLtJ_P0082705 Cd22 protein_coding protein_coding MGP_NODShiLtJ_T0082706.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31582724 31598053 - MGP_NODShiLtJ_P0082706 Cd22 protein_coding protein_coding MGP_NODShiLtJ_T0082707.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31582750 31597998 - MGP_NODShiLtJ_P0082707 Cd22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082708.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31586923 31591379 - MGP_NODShiLtJ_P0082708 Cd22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082709.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31593830 31596939 - Cd22 protein_coding processed_transcript MGP_NODShiLtJ_T0082710.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31595205 31597980 - MGP_NODShiLtJ_P0082710 Cd22 protein_coding protein_coding MGP_NODShiLtJ_T0082711.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31595345 31595869 - Cd22 protein_coding retained_intron MGP_NODShiLtJ_T0082712.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31595385 31597997 - Cd22 protein_coding processed_transcript MGP_NODShiLtJ_T0082713.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31595424 31597997 - Cd22 protein_coding processed_transcript MGP_NODShiLtJ_T0082714.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31595500 31597987 - MGP_NODShiLtJ_P0082714 Cd22 protein_coding protein_coding MGP_NODShiLtJ_T0082715.1 MGP_NODShiLtJ_G0031863.1 mouse_genomes_project 7 31596907 31598061 - Cd22 protein_coding processed_transcript MGP_NODShiLtJ_T0015796.1 MGP_NODShiLtJ_G0013904.1 mouse_genomes_project 7 141896761 141896990 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102179.1 MGP_NODShiLtJ_G0040345.1 mouse_genomes_project 7 95073131 95074382 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0005110.1 MGP_NODShiLtJ_G0004349.1 mouse_genomes_project 7 24377647 24385461 - Gm26550 antisense antisense MGP_NODShiLtJ_T0084463.1 MGP_NODShiLtJ_G0032264.1 mouse_genomes_project 7 92076716 92116956 + Tmc3 protein_coding retained_intron MGP_NODShiLtJ_T0084464.1 MGP_NODShiLtJ_G0032264.1 mouse_genomes_project 7 92076720 92089006 + Tmc3 protein_coding retained_intron MGP_NODShiLtJ_T0084465.1 MGP_NODShiLtJ_G0032264.1 mouse_genomes_project 7 92076720 92124464 + MGP_NODShiLtJ_P0084465 Tmc3 protein_coding protein_coding MGP_NODShiLtJ_T0084466.1 MGP_NODShiLtJ_G0032264.1 mouse_genomes_project 7 92076881 92121796 + MGP_NODShiLtJ_P0084466 Tmc3 protein_coding protein_coding MGP_NODShiLtJ_T0084467.1 MGP_NODShiLtJ_G0032264.1 mouse_genomes_project 7 92095028 92096402 + Tmc3 protein_coding retained_intron MGP_NODShiLtJ_T0085089.1 MGP_NODShiLtJ_G0032433.1 mouse_genomes_project 7 114867973 114878668 + MGP_NODShiLtJ_P0085089 Olfr558 protein_coding protein_coding MGP_NODShiLtJ_T0084484.1 MGP_NODShiLtJ_G0032270.1 mouse_genomes_project 7 92415485 92433112 + Mesdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0084485.1 MGP_NODShiLtJ_G0032270.1 mouse_genomes_project 7 92427320 92436691 + MGP_NODShiLtJ_P0084485 Mesdc2 protein_coding protein_coding MGP_NODShiLtJ_T0084486.1 MGP_NODShiLtJ_G0032270.1 mouse_genomes_project 7 92427322 92432939 + MGP_NODShiLtJ_P0084486 Mesdc2 protein_coding protein_coding MGP_NODShiLtJ_T0084487.1 MGP_NODShiLtJ_G0032270.1 mouse_genomes_project 7 92427650 92433252 + MGP_NODShiLtJ_P0084487 Mesdc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0102058.1 MGP_NODShiLtJ_G0040225.1 mouse_genomes_project 7 8028746 8029642 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084666.1 MGP_NODShiLtJ_G0032334.1 mouse_genomes_project 7 109132502 109195539 + MGP_NODShiLtJ_P0084666 Ints4 protein_coding protein_coding MGP_NODShiLtJ_T0084667.1 MGP_NODShiLtJ_G0032334.1 mouse_genomes_project 7 109132549 109167045 + Ints4 protein_coding retained_intron MGP_NODShiLtJ_T0084668.1 MGP_NODShiLtJ_G0032334.1 mouse_genomes_project 7 109132559 109148608 + Ints4 protein_coding retained_intron MGP_NODShiLtJ_T0084669.1 MGP_NODShiLtJ_G0032334.1 mouse_genomes_project 7 109154376 109160677 + MGP_NODShiLtJ_P0084669 Ints4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084670.1 MGP_NODShiLtJ_G0032334.1 mouse_genomes_project 7 109184326 109189394 + Ints4 protein_coding retained_intron MGP_NODShiLtJ_T0084671.1 MGP_NODShiLtJ_G0032334.1 mouse_genomes_project 7 109189228 109195407 + Ints4 protein_coding retained_intron MGP_NODShiLtJ_T0084672.1 MGP_NODShiLtJ_G0032334.1 mouse_genomes_project 7 109189460 109195540 + Ints4 protein_coding retained_intron MGP_NODShiLtJ_T0082310.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29298414 29312047 + MGP_NODShiLtJ_P0082310 Hnrnpl protein_coding protein_coding MGP_NODShiLtJ_T0082311.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29298679 29306821 + Hnrnpl protein_coding retained_intron MGP_NODShiLtJ_T0082312.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29298681 29312030 + MGP_NODShiLtJ_P0082312 Hnrnpl protein_coding protein_coding MGP_NODShiLtJ_T0082313.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29299391 29304986 + MGP_NODShiLtJ_P0082313 Hnrnpl protein_coding protein_coding MGP_NODShiLtJ_T0082314.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29300758 29312047 + MGP_NODShiLtJ_P0082314 Hnrnpl protein_coding protein_coding MGP_NODShiLtJ_T0082315.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29300805 29312021 + MGP_NODShiLtJ_P0082315 Hnrnpl protein_coding protein_coding MGP_NODShiLtJ_T0082316.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29300808 29306797 + Hnrnpl protein_coding retained_intron MGP_NODShiLtJ_T0082317.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29303213 29312030 + MGP_NODShiLtJ_P0082317 Hnrnpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082318.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29303246 29304316 + Hnrnpl protein_coding retained_intron MGP_NODShiLtJ_T0082319.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29304692 29308561 + Hnrnpl protein_coding retained_intron MGP_NODShiLtJ_T0082320.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29304966 29310504 + Hnrnpl protein_coding retained_intron MGP_NODShiLtJ_T0082321.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29307694 29308573 + Hnrnpl protein_coding retained_intron MGP_NODShiLtJ_T0082322.1 MGP_NODShiLtJ_G0031777.1 mouse_genomes_project 7 29310993 29312025 + Hnrnpl protein_coding retained_intron MGP_NODShiLtJ_T0008774.1 MGP_NODShiLtJ_G0007083.1 mouse_genomes_project 7 41466933 41467504 - lincRNA lincRNA MGP_NODShiLtJ_T0081331.1 MGP_NODShiLtJ_G0031494.1 mouse_genomes_project 7 13184311 13185354 - MGP_NODShiLtJ_P0081331 protein_coding protein_coding MGP_NODShiLtJ_T0098454.1 MGP_NODShiLtJ_G0036854.1 mouse_genomes_project 7 161075322 161075783 - Gm14376 sense_intronic sense_intronic MGP_NODShiLtJ_T0086385.1 MGP_NODShiLtJ_G0032841.1 mouse_genomes_project 7 142585427 142588786 - MGP_NODShiLtJ_P0086385 Zfp747 protein_coding protein_coding MGP_NODShiLtJ_T0086386.1 MGP_NODShiLtJ_G0032841.1 mouse_genomes_project 7 142587385 142588749 - MGP_NODShiLtJ_P0086386 Zfp747 protein_coding protein_coding MGP_NODShiLtJ_T0086387.1 MGP_NODShiLtJ_G0032841.1 mouse_genomes_project 7 142588124 142588752 - Zfp747 protein_coding retained_intron MGP_NODShiLtJ_T0084763.1 MGP_NODShiLtJ_G0032351.1 mouse_genomes_project 7 110613804 110626524 + MGP_NODShiLtJ_P0084763 Wnt11 protein_coding protein_coding MGP_NODShiLtJ_T0084764.1 MGP_NODShiLtJ_G0032351.1 mouse_genomes_project 7 110613804 110633736 + MGP_NODShiLtJ_P0084764 Wnt11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084765.1 MGP_NODShiLtJ_G0032351.1 mouse_genomes_project 7 110613823 110635120 + MGP_NODShiLtJ_P0084765 Wnt11 protein_coding protein_coding MGP_NODShiLtJ_T0084766.1 MGP_NODShiLtJ_G0032351.1 mouse_genomes_project 7 110618842 110633676 + MGP_NODShiLtJ_P0084766 Wnt11 protein_coding protein_coding MGP_NODShiLtJ_T0084767.1 MGP_NODShiLtJ_G0032351.1 mouse_genomes_project 7 110618895 110633496 + MGP_NODShiLtJ_P0084767 Wnt11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081487.1 MGP_NODShiLtJ_G0031536.1 mouse_genomes_project 7 16028926 16053247 + Psg16 protein_coding retained_intron MGP_NODShiLtJ_T0081488.1 MGP_NODShiLtJ_G0031536.1 mouse_genomes_project 7 16045758 16051728 + MGP_NODShiLtJ_P0081488 Psg16 protein_coding protein_coding MGP_NODShiLtJ_T0081489.1 MGP_NODShiLtJ_G0031536.1 mouse_genomes_project 7 16048195 16057516 + MGP_NODShiLtJ_P0081489 Psg16 protein_coding protein_coding MGP_NODShiLtJ_T0081171.1 MGP_NODShiLtJ_G0031425.1 mouse_genomes_project 7 4144447 4171293 - MGP_NODShiLtJ_P0081171 Peg3 protein_coding protein_coding MGP_NODShiLtJ_T0081172.1 MGP_NODShiLtJ_G0031425.1 mouse_genomes_project 7 4149950 4171291 - MGP_NODShiLtJ_P0081172 Peg3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081173.1 MGP_NODShiLtJ_G0031425.1 mouse_genomes_project 7 4152251 4164087 - MGP_NODShiLtJ_P0081173 Peg3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081174.1 MGP_NODShiLtJ_G0031425.1 mouse_genomes_project 7 4162804 4171291 - Peg3 protein_coding retained_intron MGP_NODShiLtJ_T0015617.1 MGP_NODShiLtJ_G0013725.1 mouse_genomes_project 7 25932838 25933007 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0082224.1 MGP_NODShiLtJ_G0031752.1 mouse_genomes_project 7 28702018 28710740 - MGP_NODShiLtJ_P0082224 Dll3 protein_coding protein_coding MGP_NODShiLtJ_T0082225.1 MGP_NODShiLtJ_G0031752.1 mouse_genomes_project 7 28702064 28702947 - Dll3 protein_coding processed_transcript MGP_NODShiLtJ_T0082226.1 MGP_NODShiLtJ_G0031752.1 mouse_genomes_project 7 28707173 28710274 - Dll3 protein_coding retained_intron MGP_NODShiLtJ_T0086197.1 MGP_NODShiLtJ_G0032806.1 mouse_genomes_project 7 141938956 141943035 + MGP_NODShiLtJ_P0086197 Tbx6 protein_coding protein_coding MGP_NODShiLtJ_T0086198.1 MGP_NODShiLtJ_G0032806.1 mouse_genomes_project 7 141938956 141942834 + MGP_NODShiLtJ_P0086198 Tbx6 protein_coding protein_coding MGP_NODShiLtJ_T0081286.1 MGP_NODShiLtJ_G0031477.1 mouse_genomes_project 7 11518896 11538614 - MGP_NODShiLtJ_P0081286 6330408A02Rik protein_coding protein_coding MGP_NODShiLtJ_T0081287.1 MGP_NODShiLtJ_G0031477.1 mouse_genomes_project 7 11518896 11538075 - MGP_NODShiLtJ_P0081287 6330408A02Rik protein_coding protein_coding MGP_NODShiLtJ_T0081288.1 MGP_NODShiLtJ_G0031477.1 mouse_genomes_project 7 11518897 11538652 - MGP_NODShiLtJ_P0081288 6330408A02Rik protein_coding protein_coding MGP_NODShiLtJ_T0081289.1 MGP_NODShiLtJ_G0031477.1 mouse_genomes_project 7 11525657 11538652 - 6330408A02Rik protein_coding retained_intron MGP_NODShiLtJ_T0081290.1 MGP_NODShiLtJ_G0031477.1 mouse_genomes_project 7 11533176 11538601 - 6330408A02Rik protein_coding retained_intron MGP_NODShiLtJ_T0081291.1 MGP_NODShiLtJ_G0031477.1 mouse_genomes_project 7 11533285 11538353 - 6330408A02Rik protein_coding retained_intron MGP_NODShiLtJ_T0081292.1 MGP_NODShiLtJ_G0031477.1 mouse_genomes_project 7 11537210 11538593 - MGP_NODShiLtJ_P0081292 6330408A02Rik protein_coding protein_coding MGP_NODShiLtJ_T0002273.1 MGP_NODShiLtJ_G0002184.1 mouse_genomes_project 7 159812889 159816809 + TEC TEC MGP_NODShiLtJ_T0002186.1 MGP_NODShiLtJ_G0002098.1 mouse_genomes_project 7 59868122 59869513 + TEC TEC MGP_NODShiLtJ_T0082778.1 MGP_NODShiLtJ_G0031873.1 mouse_genomes_project 7 31811500 31822976 + MGP_NODShiLtJ_P0082778 Lgi4 protein_coding protein_coding MGP_NODShiLtJ_T0082779.1 MGP_NODShiLtJ_G0031873.1 mouse_genomes_project 7 31812740 31815844 + MGP_NODShiLtJ_P0082779 Lgi4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082780.1 MGP_NODShiLtJ_G0031873.1 mouse_genomes_project 7 31812778 31816250 + MGP_NODShiLtJ_P0082780 Lgi4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082781.1 MGP_NODShiLtJ_G0031873.1 mouse_genomes_project 7 31815724 31816772 + MGP_NODShiLtJ_P0082781 Lgi4 protein_coding protein_coding MGP_NODShiLtJ_T0085367.1 MGP_NODShiLtJ_G0032594.1 mouse_genomes_project 7 120277734 120279459 - MGP_NODShiLtJ_P0085367 Olfr2 protein_coding protein_coding MGP_NODShiLtJ_T0083886.1 MGP_NODShiLtJ_G0032153.1 mouse_genomes_project 7 70786613 70813910 - MGP_NODShiLtJ_P0083886 Fan1 protein_coding protein_coding MGP_NODShiLtJ_T0083887.1 MGP_NODShiLtJ_G0032153.1 mouse_genomes_project 7 70801324 70813203 - Fan1 protein_coding retained_intron MGP_NODShiLtJ_T0083888.1 MGP_NODShiLtJ_G0032153.1 mouse_genomes_project 7 70809985 70813925 - Fan1 protein_coding retained_intron MGP_NODShiLtJ_T0083889.1 MGP_NODShiLtJ_G0032153.1 mouse_genomes_project 7 70810744 70813871 - Fan1 protein_coding retained_intron MGP_NODShiLtJ_T0081645.1 MGP_NODShiLtJ_G0031589.1 mouse_genomes_project 7 18904259 18914427 + MGP_NODShiLtJ_P0081645 Trappc6a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081646.1 MGP_NODShiLtJ_G0031589.1 mouse_genomes_project 7 18904299 18914434 + MGP_NODShiLtJ_P0081646 Trappc6a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081647.1 MGP_NODShiLtJ_G0031589.1 mouse_genomes_project 7 18904301 18914434 + MGP_NODShiLtJ_P0081647 Trappc6a protein_coding protein_coding MGP_NODShiLtJ_T0081648.1 MGP_NODShiLtJ_G0031589.1 mouse_genomes_project 7 18904315 18914430 + MGP_NODShiLtJ_P0081648 Trappc6a protein_coding protein_coding MGP_NODShiLtJ_T0081649.1 MGP_NODShiLtJ_G0031589.1 mouse_genomes_project 7 18904319 18913607 + Trappc6a protein_coding retained_intron MGP_NODShiLtJ_T0081650.1 MGP_NODShiLtJ_G0031589.1 mouse_genomes_project 7 18912708 18914425 + MGP_NODShiLtJ_P0081650 Trappc6a protein_coding protein_coding MGP_NODShiLtJ_T0002260.1 MGP_NODShiLtJ_G0002171.1 mouse_genomes_project 7 142358696 142359944 - TEC TEC MGP_NODShiLtJ_T0005124.1 MGP_NODShiLtJ_G0004359.1 mouse_genomes_project 7 29679736 29680973 + 1110035H17Rik antisense antisense MGP_NODShiLtJ_T0005125.1 MGP_NODShiLtJ_G0004359.1 mouse_genomes_project 7 29679736 29680971 + 1110035H17Rik antisense pseudogene MGP_NODShiLtJ_T0080814.1 MGP_NODShiLtJ_G0031327.1 mouse_genomes_project 7 213360 228478 + Prkcg protein_coding processed_transcript MGP_NODShiLtJ_T0080819.1 MGP_NODShiLtJ_G0031327.1 mouse_genomes_project 7 227688 256251 + MGP_NODShiLtJ_P0080819 Prkcg protein_coding protein_coding MGP_NODShiLtJ_T0080820.1 MGP_NODShiLtJ_G0031327.1 mouse_genomes_project 7 227811 255515 + MGP_NODShiLtJ_P0080820 Prkcg protein_coding protein_coding MGP_NODShiLtJ_T0080821.1 MGP_NODShiLtJ_G0031327.1 mouse_genomes_project 7 229485 244191 + MGP_NODShiLtJ_P0080821 Prkcg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080822.1 MGP_NODShiLtJ_G0031327.1 mouse_genomes_project 7 253985 255168 + Prkcg protein_coding retained_intron MGP_NODShiLtJ_T0008736.1 MGP_NODShiLtJ_G0007050.1 mouse_genomes_project 7 24411282 24413077 + Gm4598 lincRNA lincRNA MGP_NODShiLtJ_T0010745.1 MGP_NODShiLtJ_G0008878.1 mouse_genomes_project 7 27426411 27426499 - Mir3101 miRNA miRNA MGP_NODShiLtJ_T0081935.1 MGP_NODShiLtJ_G0031674.1 mouse_genomes_project 7 25165354 25167766 - MGP_NODShiLtJ_P0081935 Pafah1b3 protein_coding protein_coding MGP_NODShiLtJ_T0081936.1 MGP_NODShiLtJ_G0031674.1 mouse_genomes_project 7 25165362 25167016 - Pafah1b3 protein_coding retained_intron MGP_NODShiLtJ_T0081937.1 MGP_NODShiLtJ_G0031674.1 mouse_genomes_project 7 25165672 25168196 - MGP_NODShiLtJ_P0081937 Pafah1b3 protein_coding protein_coding MGP_NODShiLtJ_T0081938.1 MGP_NODShiLtJ_G0031674.1 mouse_genomes_project 7 25166279 25168251 - MGP_NODShiLtJ_P0081938 Pafah1b3 protein_coding protein_coding MGP_NODShiLtJ_T0081939.1 MGP_NODShiLtJ_G0031674.1 mouse_genomes_project 7 25166933 25168235 - Pafah1b3 protein_coding retained_intron MGP_NODShiLtJ_T0081940.1 MGP_NODShiLtJ_G0031674.1 mouse_genomes_project 7 25167187 25168248 - Pafah1b3 protein_coding processed_transcript MGP_NODShiLtJ_T0082552.1 MGP_NODShiLtJ_G0031828.1 mouse_genomes_project 7 30967400 30969890 - MGP_NODShiLtJ_P0082552 Sdhaf1 protein_coding protein_coding MGP_NODShiLtJ_T0087039.1 MGP_NODShiLtJ_G0032997.1 mouse_genomes_project 7 157043779 157054405 - MGP_NODShiLtJ_P0087039 Syce1 protein_coding protein_coding MGP_NODShiLtJ_T0005168.1 MGP_NODShiLtJ_G0004391.1 mouse_genomes_project 7 79345933 79348626 + Gm45107 antisense antisense MGP_NODShiLtJ_T0084812.1 MGP_NODShiLtJ_G0032369.1 mouse_genomes_project 7 111870340 111898698 + MGP_NODShiLtJ_P0084812 Chrdl2 protein_coding protein_coding MGP_NODShiLtJ_T0084813.1 MGP_NODShiLtJ_G0032369.1 mouse_genomes_project 7 111873849 111898700 + MGP_NODShiLtJ_P0084813 Chrdl2 protein_coding protein_coding MGP_NODShiLtJ_T0084814.1 MGP_NODShiLtJ_G0032369.1 mouse_genomes_project 7 111885998 111898698 + MGP_NODShiLtJ_P0084814 Chrdl2 protein_coding protein_coding MGP_NODShiLtJ_T0005162.1 MGP_NODShiLtJ_G0004387.1 mouse_genomes_project 7 54423475 54482607 - Nell1os antisense antisense MGP_NODShiLtJ_T0005163.1 MGP_NODShiLtJ_G0004387.1 mouse_genomes_project 7 54447900 54482694 - Nell1os antisense antisense MGP_NODShiLtJ_T0005164.1 MGP_NODShiLtJ_G0004387.1 mouse_genomes_project 7 54469379 54480235 - Nell1os antisense antisense MGP_NODShiLtJ_T0002160.1 MGP_NODShiLtJ_G0002072.1 mouse_genomes_project 7 36261417 36262034 - TEC TEC MGP_NODShiLtJ_T0081186.1 MGP_NODShiLtJ_G0031434.1 mouse_genomes_project 7 8248900 8249896 + MGP_NODShiLtJ_P0081186 Vmn1r67 protein_coding protein_coding MGP_NODShiLtJ_T0010822.1 MGP_NODShiLtJ_G0008955.1 mouse_genomes_project 7 149730753 149730864 - Gm23631 miRNA miRNA MGP_NODShiLtJ_T0081209.1 MGP_NODShiLtJ_G0031452.1 mouse_genomes_project 7 10613605 10621227 - MGP_NODShiLtJ_P0081209 Zfp551 protein_coding protein_coding MGP_NODShiLtJ_T0081210.1 MGP_NODShiLtJ_G0031452.1 mouse_genomes_project 7 10615404 10620964 - MGP_NODShiLtJ_P0081210 Zfp551 protein_coding protein_coding MGP_NODShiLtJ_T0081211.1 MGP_NODShiLtJ_G0031452.1 mouse_genomes_project 7 10615557 10620915 - Zfp551 protein_coding processed_transcript MGP_NODShiLtJ_T0085562.1 MGP_NODShiLtJ_G0032677.1 mouse_genomes_project 7 126250013 126298955 + MGP_NODShiLtJ_P0085562 Micalcl protein_coding protein_coding MGP_NODShiLtJ_T0085563.1 MGP_NODShiLtJ_G0032677.1 mouse_genomes_project 7 126260214 126281209 + MGP_NODShiLtJ_P0085563 Micalcl protein_coding protein_coding MGP_NODShiLtJ_T0085564.1 MGP_NODShiLtJ_G0032677.1 mouse_genomes_project 7 126260737 126298949 + MGP_NODShiLtJ_P0085564 Micalcl protein_coding protein_coding MGP_NODShiLtJ_T0085565.1 MGP_NODShiLtJ_G0032677.1 mouse_genomes_project 7 126267004 126298949 + MGP_NODShiLtJ_P0085565 Micalcl protein_coding protein_coding MGP_NODShiLtJ_T0085566.1 MGP_NODShiLtJ_G0032677.1 mouse_genomes_project 7 126292961 126298900 + Micalcl protein_coding retained_intron MGP_NODShiLtJ_T0081501.1 MGP_NODShiLtJ_G0031545.1 mouse_genomes_project 7 17405597 17429137 + MGP_NODShiLtJ_P0081501 Mill1 protein_coding protein_coding MGP_NODShiLtJ_T0102159.1 MGP_NODShiLtJ_G0040325.1 mouse_genomes_project 7 52061385 52062370 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0008977.1 MGP_NODShiLtJ_G0007217.1 mouse_genomes_project 7 159043747 159047848 - H19 lincRNA lincRNA MGP_NODShiLtJ_T0008978.1 MGP_NODShiLtJ_G0007217.1 mouse_genomes_project 7 159043776 159046339 - H19 lincRNA lincRNA MGP_NODShiLtJ_T0008979.1 MGP_NODShiLtJ_G0007217.1 mouse_genomes_project 7 159043852 159044757 - H19 lincRNA lincRNA MGP_NODShiLtJ_T0008980.1 MGP_NODShiLtJ_G0007217.1 mouse_genomes_project 7 159044514 159045129 - H19 lincRNA lincRNA MGP_NODShiLtJ_T0008981.1 MGP_NODShiLtJ_G0007217.1 mouse_genomes_project 7 159044725 159046314 - H19 lincRNA lincRNA MGP_NODShiLtJ_T0002162.1 MGP_NODShiLtJ_G0002074.1 mouse_genomes_project 7 38040869 38041791 + TEC TEC MGP_NODShiLtJ_T0081754.1 MGP_NODShiLtJ_G0031631.1 mouse_genomes_project 7 23869534 23876463 + MGP_NODShiLtJ_P0081754 Zfp114 protein_coding protein_coding MGP_NODShiLtJ_T0081755.1 MGP_NODShiLtJ_G0031631.1 mouse_genomes_project 7 23869560 23877714 + MGP_NODShiLtJ_P0081755 Zfp114 protein_coding protein_coding MGP_NODShiLtJ_T0081756.1 MGP_NODShiLtJ_G0031631.1 mouse_genomes_project 7 23871838 23878587 + MGP_NODShiLtJ_P0081756 Zfp114 protein_coding protein_coding MGP_NODShiLtJ_T0102125.1 MGP_NODShiLtJ_G0040291.1 mouse_genomes_project 7 42729919 42735702 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015708.1 MGP_NODShiLtJ_G0013816.1 mouse_genomes_project 7 70213670 70213931 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099514.1 MGP_NODShiLtJ_G0037908.1 mouse_genomes_project 7 125782868 125783018 - Gm23345 snRNA snRNA MGP_NODShiLtJ_T0085044.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114306844 114325722 + MGP_NODShiLtJ_P0085044 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085045.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114306844 114338727 + MGP_NODShiLtJ_P0085045 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085046.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114306854 114325782 + MGP_NODShiLtJ_P0085046 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085047.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114307006 114319524 + Pgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0085048.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114307017 114336577 + Pgap2 protein_coding retained_intron MGP_NODShiLtJ_T0085049.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114321620 114336283 + MGP_NODShiLtJ_P0085049 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085050.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114321824 114337344 + MGP_NODShiLtJ_P0085050 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085051.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322208 114338727 + MGP_NODShiLtJ_P0085051 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085052.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322225 114337342 + MGP_NODShiLtJ_P0085052 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085053.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322230 114337937 + MGP_NODShiLtJ_P0085053 Pgap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085054.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322233 114336349 + MGP_NODShiLtJ_P0085054 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085055.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322249 114337923 + MGP_NODShiLtJ_P0085055 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085056.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322251 114326448 + Pgap2 protein_coding retained_intron MGP_NODShiLtJ_T0085057.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322252 114337778 + Pgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0085058.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322255 114325691 + MGP_NODShiLtJ_P0085058 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085059.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322258 114336534 + Pgap2 protein_coding retained_intron MGP_NODShiLtJ_T0085060.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322264 114337736 + MGP_NODShiLtJ_P0085060 Pgap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085061.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322265 114337849 + MGP_NODShiLtJ_P0085061 Pgap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085062.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322273 114338720 + Pgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0085063.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114322462 114336414 + MGP_NODShiLtJ_P0085063 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085064.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114325154 114336451 + MGP_NODShiLtJ_P0085064 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085065.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114325167 114337668 + MGP_NODShiLtJ_P0085065 Pgap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085066.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114330009 114338720 + MGP_NODShiLtJ_P0085066 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085067.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114335969 114337646 + MGP_NODShiLtJ_P0085067 Pgap2 protein_coding protein_coding MGP_NODShiLtJ_T0085068.1 MGP_NODShiLtJ_G0032414.1 mouse_genomes_project 7 114336018 114337770 + Pgap2 protein_coding retained_intron MGP_NODShiLtJ_T0015799.1 MGP_NODShiLtJ_G0013907.1 mouse_genomes_project 7 142337497 142338435 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084212.1 MGP_NODShiLtJ_G0032213.1 mouse_genomes_project 7 87912250 87913798 - MGP_NODShiLtJ_P0084212 Mesp1 protein_coding protein_coding MGP_NODShiLtJ_T0100751.1 MGP_NODShiLtJ_G0039145.1 mouse_genomes_project 7 65176472 65176561 - Gm22373 snoRNA snoRNA MGP_NODShiLtJ_T0086254.1 MGP_NODShiLtJ_G0032813.1 mouse_genomes_project 7 142026421 142029827 + MGP_NODShiLtJ_P0086254 Hirip3 protein_coding protein_coding MGP_NODShiLtJ_T0086255.1 MGP_NODShiLtJ_G0032813.1 mouse_genomes_project 7 142026888 142027854 + Hirip3 protein_coding retained_intron MGP_NODShiLtJ_T0086256.1 MGP_NODShiLtJ_G0032813.1 mouse_genomes_project 7 142026913 142028175 + Hirip3 protein_coding retained_intron MGP_NODShiLtJ_T0086257.1 MGP_NODShiLtJ_G0032813.1 mouse_genomes_project 7 142026916 142028621 + Hirip3 protein_coding processed_transcript MGP_NODShiLtJ_T0086258.1 MGP_NODShiLtJ_G0032813.1 mouse_genomes_project 7 142026930 142027881 + MGP_NODShiLtJ_P0086258 Hirip3 protein_coding protein_coding MGP_NODShiLtJ_T0086259.1 MGP_NODShiLtJ_G0032813.1 mouse_genomes_project 7 142028292 142028978 + Hirip3 protein_coding retained_intron MGP_NODShiLtJ_T0086260.1 MGP_NODShiLtJ_G0032813.1 mouse_genomes_project 7 142028865 142029368 + Hirip3 protein_coding retained_intron MGP_NODShiLtJ_T0002267.1 MGP_NODShiLtJ_G0002178.1 mouse_genomes_project 7 143288082 143291412 + TEC TEC MGP_NODShiLtJ_T0010801.1 MGP_NODShiLtJ_G0008934.1 mouse_genomes_project 7 107843158 107843267 + Mir708 miRNA miRNA MGP_NODShiLtJ_T0087461.1 MGP_NODShiLtJ_G0033081.1 mouse_genomes_project 7 160037225 160072893 - MGP_NODShiLtJ_P0087461 Nap1l4 protein_coding protein_coding MGP_NODShiLtJ_T0085221.1 MGP_NODShiLtJ_G0032537.1 mouse_genomes_project 7 117630531 117631485 + MGP_NODShiLtJ_P0085221 Olfr669 protein_coding protein_coding MGP_NODShiLtJ_T0081568.1 MGP_NODShiLtJ_G0031566.1 mouse_genomes_project 7 18449871 18453824 + MGP_NODShiLtJ_P0081568 Six5 protein_coding protein_coding MGP_NODShiLtJ_T0086780.1 MGP_NODShiLtJ_G0032920.1 mouse_genomes_project 7 148283925 148288685 - MGP_NODShiLtJ_P0086780 Nkx1-2 protein_coding protein_coding MGP_NODShiLtJ_T0081581.1 MGP_NODShiLtJ_G0031572.1 mouse_genomes_project 7 18536620 18569433 + MGP_NODShiLtJ_P0081581 Eml2 protein_coding protein_coding MGP_NODShiLtJ_T0081582.1 MGP_NODShiLtJ_G0031572.1 mouse_genomes_project 7 18542729 18569659 + MGP_NODShiLtJ_P0081582 Eml2 protein_coding protein_coding MGP_NODShiLtJ_T0081583.1 MGP_NODShiLtJ_G0031572.1 mouse_genomes_project 7 18542740 18569655 + MGP_NODShiLtJ_P0081583 Eml2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081584.1 MGP_NODShiLtJ_G0031572.1 mouse_genomes_project 7 18542763 18569656 + MGP_NODShiLtJ_P0081584 Eml2 protein_coding protein_coding MGP_NODShiLtJ_T0081585.1 MGP_NODShiLtJ_G0031572.1 mouse_genomes_project 7 18542775 18546556 + MGP_NODShiLtJ_P0081585 Eml2 protein_coding protein_coding MGP_NODShiLtJ_T0081586.1 MGP_NODShiLtJ_G0031572.1 mouse_genomes_project 7 18542796 18547994 + MGP_NODShiLtJ_P0081586 Eml2 protein_coding protein_coding MGP_NODShiLtJ_T0081587.1 MGP_NODShiLtJ_G0031572.1 mouse_genomes_project 7 18542890 18546559 + Eml2 protein_coding processed_transcript MGP_NODShiLtJ_T0081588.1 MGP_NODShiLtJ_G0031572.1 mouse_genomes_project 7 18543164 18548007 + Eml2 protein_coding retained_intron MGP_NODShiLtJ_T0083754.1 MGP_NODShiLtJ_G0032125.1 mouse_genomes_project 7 56120997 56129785 - MGP_NODShiLtJ_P0083754 Svip protein_coding protein_coding MGP_NODShiLtJ_T0002194.1 MGP_NODShiLtJ_G0002106.1 mouse_genomes_project 7 70344833 70346364 + TEC TEC MGP_NODShiLtJ_T0102106.1 MGP_NODShiLtJ_G0031663.1 mouse_genomes_project 7 24736188 24736774 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100769.1 MGP_NODShiLtJ_G0039163.1 mouse_genomes_project 7 123151935 123152067 + Snora3 snoRNA snoRNA MGP_NODShiLtJ_T0008765.1 MGP_NODShiLtJ_G0007077.1 mouse_genomes_project 7 38506497 38507653 + Gm28075 lincRNA lincRNA MGP_NODShiLtJ_T0085890.1 MGP_NODShiLtJ_G0032755.1 mouse_genomes_project 7 136803951 136838411 - MGP_NODShiLtJ_P0085890 Gga2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085891.1 MGP_NODShiLtJ_G0032755.1 mouse_genomes_project 7 136803951 136838466 - MGP_NODShiLtJ_P0085891 Gga2 protein_coding protein_coding MGP_NODShiLtJ_T0085892.1 MGP_NODShiLtJ_G0032755.1 mouse_genomes_project 7 136805994 136819727 - Gga2 protein_coding retained_intron MGP_NODShiLtJ_T0085893.1 MGP_NODShiLtJ_G0032755.1 mouse_genomes_project 7 136813835 136816289 - Gga2 protein_coding retained_intron MGP_NODShiLtJ_T0085894.1 MGP_NODShiLtJ_G0032755.1 mouse_genomes_project 7 136821982 136838424 - Gga2 protein_coding retained_intron MGP_NODShiLtJ_T0085895.1 MGP_NODShiLtJ_G0032755.1 mouse_genomes_project 7 136827658 136838431 - Gga2 protein_coding retained_intron MGP_NODShiLtJ_T0087481.1 MGP_NODShiLtJ_G0033087.1 mouse_genomes_project 7 160338173 160341456 - MGP_NODShiLtJ_P0087481 Mrgprg protein_coding protein_coding MGP_NODShiLtJ_T0015814.1 MGP_NODShiLtJ_G0013922.1 mouse_genomes_project 7 155002416 155003343 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083701.1 MGP_NODShiLtJ_G0032113.1 mouse_genomes_project 7 52637758 52652928 - MGP_NODShiLtJ_P0083701 E2f8 protein_coding protein_coding MGP_NODShiLtJ_T0083702.1 MGP_NODShiLtJ_G0032113.1 mouse_genomes_project 7 52637758 52652373 - MGP_NODShiLtJ_P0083702 E2f8 protein_coding protein_coding MGP_NODShiLtJ_T0083703.1 MGP_NODShiLtJ_G0032113.1 mouse_genomes_project 7 52643436 52646575 - E2f8 protein_coding retained_intron MGP_NODShiLtJ_T0083704.1 MGP_NODShiLtJ_G0032113.1 mouse_genomes_project 7 52650164 52652336 - E2f8 protein_coding retained_intron MGP_NODShiLtJ_T0081269.1 MGP_NODShiLtJ_G0031470.1 mouse_genomes_project 7 11278956 11281455 - MGP_NODShiLtJ_P0081269 Ube2m protein_coding protein_coding MGP_NODShiLtJ_T0081270.1 MGP_NODShiLtJ_G0031470.1 mouse_genomes_project 7 11278983 11281373 - Ube2m protein_coding processed_transcript MGP_NODShiLtJ_T0081271.1 MGP_NODShiLtJ_G0031470.1 mouse_genomes_project 7 11279053 11281353 - MGP_NODShiLtJ_P0081271 Ube2m protein_coding protein_coding MGP_NODShiLtJ_T0081272.1 MGP_NODShiLtJ_G0031470.1 mouse_genomes_project 7 11279313 11280374 - MGP_NODShiLtJ_P0081272 Ube2m protein_coding protein_coding MGP_NODShiLtJ_T0081273.1 MGP_NODShiLtJ_G0031470.1 mouse_genomes_project 7 11279701 11281472 - Ube2m protein_coding retained_intron MGP_NODShiLtJ_T0081274.1 MGP_NODShiLtJ_G0031470.1 mouse_genomes_project 7 11280167 11281997 - MGP_NODShiLtJ_P0081274 Ube2m protein_coding protein_coding MGP_NODShiLtJ_T0081275.1 MGP_NODShiLtJ_G0031470.1 mouse_genomes_project 7 11280291 11281247 - Ube2m protein_coding processed_transcript MGP_NODShiLtJ_T0015715.1 MGP_NODShiLtJ_G0013823.1 mouse_genomes_project 7 76516063 76517062 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085729.1 MGP_NODShiLtJ_G0032710.1 mouse_genomes_project 7 133180026 133202709 - MGP_NODShiLtJ_P0085729 Gde1 protein_coding protein_coding MGP_NODShiLtJ_T0085730.1 MGP_NODShiLtJ_G0032710.1 mouse_genomes_project 7 133183064 133202311 - MGP_NODShiLtJ_P0085730 Gde1 protein_coding protein_coding MGP_NODShiLtJ_T0084908.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113290455 113304264 - MGP_NODShiLtJ_P0084908 Atg16l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084909.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113290678 113304325 - MGP_NODShiLtJ_P0084909 Atg16l2 protein_coding protein_coding MGP_NODShiLtJ_T0084910.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113290680 113291523 - Atg16l2 protein_coding retained_intron MGP_NODShiLtJ_T0084911.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113290680 113304308 - MGP_NODShiLtJ_P0084911 Atg16l2 protein_coding protein_coding MGP_NODShiLtJ_T0084912.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113290689 113304488 - MGP_NODShiLtJ_P0084912 Atg16l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084913.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113290891 113291640 - Atg16l2 protein_coding retained_intron MGP_NODShiLtJ_T0084914.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113291707 113293207 - Atg16l2 protein_coding retained_intron MGP_NODShiLtJ_T0084915.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113292224 113293210 - Atg16l2 protein_coding retained_intron MGP_NODShiLtJ_T0084916.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113292638 113293452 - Atg16l2 protein_coding retained_intron MGP_NODShiLtJ_T0084917.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113293067 113299021 - Atg16l2 protein_coding retained_intron MGP_NODShiLtJ_T0084918.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113293466 113299034 - MGP_NODShiLtJ_P0084918 Atg16l2 protein_coding protein_coding MGP_NODShiLtJ_T0084919.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113295097 113298964 - Atg16l2 protein_coding retained_intron MGP_NODShiLtJ_T0084920.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113298479 113299421 - Atg16l2 protein_coding retained_intron MGP_NODShiLtJ_T0084921.1 MGP_NODShiLtJ_G0032390.1 mouse_genomes_project 7 113299146 113304308 - MGP_NODShiLtJ_P0084921 Atg16l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0008862.1 MGP_NODShiLtJ_G0007145.1 mouse_genomes_project 7 87641719 87665683 + Gm35040 lincRNA lincRNA MGP_NODShiLtJ_T0084832.1 MGP_NODShiLtJ_G0032374.1 mouse_genomes_project 7 112177844 112224405 + MGP_NODShiLtJ_P0084832 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0084833.1 MGP_NODShiLtJ_G0032374.1 mouse_genomes_project 7 112177862 112224397 + MGP_NODShiLtJ_P0084833 protein_coding protein_coding MGP_NODShiLtJ_T0084834.1 MGP_NODShiLtJ_G0032374.1 mouse_genomes_project 7 112177862 112224397 + MGP_NODShiLtJ_P0084834 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084835.1 MGP_NODShiLtJ_G0032374.1 mouse_genomes_project 7 112177884 112200686 + protein_coding retained_intron MGP_NODShiLtJ_T0084836.1 MGP_NODShiLtJ_G0032374.1 mouse_genomes_project 7 112195752 112224396 + MGP_NODShiLtJ_P0084836 protein_coding protein_coding MGP_NODShiLtJ_T0099494.1 MGP_NODShiLtJ_G0037888.1 mouse_genomes_project 7 76392670 76392773 - Gm23815 snRNA snRNA MGP_NODShiLtJ_T0082409.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29877929 30081026 - MGP_NODShiLtJ_P0082409 Sipa1l3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082410.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29877935 29936768 - MGP_NODShiLtJ_P0082410 Sipa1l3 protein_coding protein_coding MGP_NODShiLtJ_T0082411.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29877941 29912151 - Sipa1l3 protein_coding retained_intron MGP_NODShiLtJ_T0082412.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29877941 30067851 - MGP_NODShiLtJ_P0082412 Sipa1l3 protein_coding protein_coding MGP_NODShiLtJ_T0082413.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29877941 30067851 - MGP_NODShiLtJ_P0082413 Sipa1l3 protein_coding protein_coding MGP_NODShiLtJ_T0082414.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29878951 29912073 - Sipa1l3 protein_coding retained_intron MGP_NODShiLtJ_T0082415.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29879444 29886442 - MGP_NODShiLtJ_P0082415 Sipa1l3 protein_coding protein_coding MGP_NODShiLtJ_T0082416.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29879739 29926977 - MGP_NODShiLtJ_P0082416 Sipa1l3 protein_coding protein_coding MGP_NODShiLtJ_T0082417.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29881043 29899347 - Sipa1l3 protein_coding retained_intron MGP_NODShiLtJ_T0082418.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29888557 29896542 - Sipa1l3 protein_coding retained_intron MGP_NODShiLtJ_T0082419.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29924743 29926450 - Sipa1l3 protein_coding retained_intron MGP_NODShiLtJ_T0082420.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29925862 29926985 - MGP_NODShiLtJ_P0082420 Sipa1l3 protein_coding protein_coding MGP_NODShiLtJ_T0082421.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29929940 29936908 - Sipa1l3 protein_coding retained_intron MGP_NODShiLtJ_T0082422.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29944841 30067843 - Sipa1l3 protein_coding processed_transcript MGP_NODShiLtJ_T0082423.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29960880 30080951 - MGP_NODShiLtJ_P0082423 Sipa1l3 protein_coding protein_coding MGP_NODShiLtJ_T0082424.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29960985 30080980 - Sipa1l3 protein_coding processed_transcript MGP_NODShiLtJ_T0082425.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 29961058 30080954 - Sipa1l3 protein_coding processed_transcript MGP_NODShiLtJ_T0082426.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 30054942 30080899 - Sipa1l3 protein_coding processed_transcript MGP_NODShiLtJ_T0082427.1 MGP_NODShiLtJ_G0031797.1 mouse_genomes_project 7 30079109 30080894 - Sipa1l3 protein_coding processed_transcript MGP_NODShiLtJ_T0015729.1 MGP_NODShiLtJ_G0013837.1 mouse_genomes_project 7 87511652 87511860 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084326.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88659891 88670176 - MGP_NODShiLtJ_P0084326 Blm protein_coding protein_coding MGP_NODShiLtJ_T0084327.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88660386 88749081 - MGP_NODShiLtJ_P0084327 Blm protein_coding protein_coding MGP_NODShiLtJ_T0084328.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88660485 88748960 - MGP_NODShiLtJ_P0084328 Blm protein_coding protein_coding MGP_NODShiLtJ_T0084329.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88660631 88662765 - Blm protein_coding processed_transcript MGP_NODShiLtJ_T0084330.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88660786 88664646 - Blm protein_coding retained_intron MGP_NODShiLtJ_T0084331.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88660814 88666217 - MGP_NODShiLtJ_P0084331 Blm protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084332.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88670145 88672858 - MGP_NODShiLtJ_P0084332 Blm protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084333.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88674606 88727619 - Blm protein_coding retained_intron MGP_NODShiLtJ_T0084334.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88674632 88677140 - Blm protein_coding retained_intron MGP_NODShiLtJ_T0084335.1 MGP_NODShiLtJ_G0032233.1 mouse_genomes_project 7 88680156 88688489 - Blm protein_coding retained_intron MGP_NODShiLtJ_T0085069.1 MGP_NODShiLtJ_G0032415.1 mouse_genomes_project 7 114339282 114350291 - MGP_NODShiLtJ_P0085069 Rhog protein_coding protein_coding MGP_NODShiLtJ_T0085070.1 MGP_NODShiLtJ_G0032415.1 mouse_genomes_project 7 114339282 114350256 - MGP_NODShiLtJ_P0085070 Rhog protein_coding protein_coding MGP_NODShiLtJ_T0083149.1 MGP_NODShiLtJ_G0031967.1 mouse_genomes_project 7 46486290 46490909 + MGP_NODShiLtJ_P0083149 Klk5 protein_coding protein_coding MGP_NODShiLtJ_T0083150.1 MGP_NODShiLtJ_G0031967.1 mouse_genomes_project 7 46486588 46498341 + MGP_NODShiLtJ_P0083150 Klk5 protein_coding protein_coding MGP_NODShiLtJ_T0102162.1 MGP_NODShiLtJ_G0040328.1 mouse_genomes_project 7 52459113 52460107 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0084503.1 MGP_NODShiLtJ_G0032277.1 mouse_genomes_project 7 93534345 93535636 + MGP_NODShiLtJ_P0084503 protein_coding protein_coding MGP_NODShiLtJ_T0005575.1 MGP_NODShiLtJ_G0004690.1 mouse_genomes_project 7 72405969 72406956 - Gm20684 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_NODShiLtJ_T0080871.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 604673 620513 - MGP_NODShiLtJ_P0080871 Mboat7 protein_coding protein_coding MGP_NODShiLtJ_T0080872.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 604677 619104 - MGP_NODShiLtJ_P0080872 Mboat7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080873.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 605286 618853 - MGP_NODShiLtJ_P0080873 Mboat7 protein_coding protein_coding MGP_NODShiLtJ_T0080874.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 605659 611260 - Mboat7 protein_coding retained_intron MGP_NODShiLtJ_T0080875.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 610089 619942 - Mboat7 protein_coding retained_intron MGP_NODShiLtJ_T0080876.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 612335 620239 - MGP_NODShiLtJ_P0080876 Mboat7 protein_coding protein_coding MGP_NODShiLtJ_T0080877.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 612690 619878 - MGP_NODShiLtJ_P0080877 Mboat7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080878.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 612706 619878 - MGP_NODShiLtJ_P0080878 Mboat7 protein_coding protein_coding MGP_NODShiLtJ_T0080879.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 615406 619752 - MGP_NODShiLtJ_P0080879 Mboat7 protein_coding protein_coding MGP_NODShiLtJ_T0080880.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 615835 619952 - Mboat7 protein_coding retained_intron MGP_NODShiLtJ_T0080881.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 616133 619770 - Mboat7 protein_coding retained_intron MGP_NODShiLtJ_T0080882.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 616661 619928 - Mboat7 protein_coding retained_intron MGP_NODShiLtJ_T0080883.1 MGP_NODShiLtJ_G0031339.1 mouse_genomes_project 7 618686 619644 - Mboat7 protein_coding retained_intron MGP_NODShiLtJ_T0083846.1 MGP_NODShiLtJ_G0032145.1 mouse_genomes_project 7 68634650 68637242 - MGP_NODShiLtJ_P0083846 Mkrn3 protein_coding protein_coding MGP_NODShiLtJ_T0085138.1 MGP_NODShiLtJ_G0032479.1 mouse_genomes_project 7 115932994 115933936 - MGP_NODShiLtJ_P0085138 Olfr620 protein_coding protein_coding MGP_NODShiLtJ_T0081183.1 MGP_NODShiLtJ_G0031431.1 mouse_genomes_project 7 7747128 7768715 - MGP_NODShiLtJ_P0081183 protein_coding protein_coding MGP_NODShiLtJ_T0082804.1 MGP_NODShiLtJ_G0031876.1 mouse_genomes_project 7 31868695 31881267 - MGP_NODShiLtJ_P0082804 Scn1b protein_coding protein_coding MGP_NODShiLtJ_T0086879.1 MGP_NODShiLtJ_G0032937.1 mouse_genomes_project 7 150755106 150812858 - MGP_NODShiLtJ_P0086879 Fam196a protein_coding protein_coding MGP_NODShiLtJ_T0087317.1 MGP_NODShiLtJ_G0033056.1 mouse_genomes_project 7 158620920 158622128 - MGP_NODShiLtJ_P0087317 protein_coding protein_coding MGP_NODShiLtJ_T0102206.1 MGP_NODShiLtJ_G0040372.1 mouse_genomes_project 7 116790273 116791269 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086904.1 MGP_NODShiLtJ_G0032950.1 mouse_genomes_project 7 154924666 154950462 + Ppp2r2d protein_coding retained_intron MGP_NODShiLtJ_T0086905.1 MGP_NODShiLtJ_G0032950.1 mouse_genomes_project 7 154924946 154961814 + MGP_NODShiLtJ_P0086905 Ppp2r2d protein_coding protein_coding MGP_NODShiLtJ_T0086906.1 MGP_NODShiLtJ_G0032950.1 mouse_genomes_project 7 154924973 154948544 + MGP_NODShiLtJ_P0086906 Ppp2r2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086907.1 MGP_NODShiLtJ_G0032950.1 mouse_genomes_project 7 154925185 154948587 + Ppp2r2d protein_coding processed_transcript MGP_NODShiLtJ_T0086908.1 MGP_NODShiLtJ_G0032950.1 mouse_genomes_project 7 154925218 154955328 + MGP_NODShiLtJ_P0086908 Ppp2r2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086909.1 MGP_NODShiLtJ_G0032950.1 mouse_genomes_project 7 154925398 154961245 + MGP_NODShiLtJ_P0086909 Ppp2r2d protein_coding protein_coding MGP_NODShiLtJ_T0086910.1 MGP_NODShiLtJ_G0032950.1 mouse_genomes_project 7 154925653 154948562 + Ppp2r2d protein_coding processed_transcript MGP_NODShiLtJ_T0086911.1 MGP_NODShiLtJ_G0032950.1 mouse_genomes_project 7 154947169 154955322 + MGP_NODShiLtJ_P0086911 Ppp2r2d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002253.1 MGP_NODShiLtJ_G0002164.1 mouse_genomes_project 7 137569765 137571393 - TEC TEC MGP_NODShiLtJ_T0018258.1 MGP_NODShiLtJ_G0015559.1 mouse_genomes_project 7 143506255 143517546 - 4931431B13Rik processed_transcript antisense MGP_NODShiLtJ_T0018259.1 MGP_NODShiLtJ_G0015559.1 mouse_genomes_project 7 143516300 143517542 - 4931431B13Rik processed_transcript retained_intron MGP_NODShiLtJ_T0084837.1 MGP_NODShiLtJ_G0032375.1 mouse_genomes_project 7 112232033 112277936 - MGP_NODShiLtJ_P0084837 Ppme1 protein_coding protein_coding MGP_NODShiLtJ_T0083075.1 MGP_NODShiLtJ_G0031940.1 mouse_genomes_project 7 46005589 46019666 + MGP_NODShiLtJ_P0083075 Siglecg protein_coding protein_coding MGP_NODShiLtJ_T0083076.1 MGP_NODShiLtJ_G0031940.1 mouse_genomes_project 7 46005624 46019666 + Siglecg protein_coding retained_intron MGP_NODShiLtJ_T0083077.1 MGP_NODShiLtJ_G0031940.1 mouse_genomes_project 7 46005653 46019666 + Siglecg protein_coding retained_intron MGP_NODShiLtJ_T0083078.1 MGP_NODShiLtJ_G0031940.1 mouse_genomes_project 7 46005858 46012850 + Siglecg protein_coding retained_intron MGP_NODShiLtJ_T0010770.1 MGP_NODShiLtJ_G0008903.1 mouse_genomes_project 7 67668953 67669032 - Gm25533 miRNA miRNA MGP_NODShiLtJ_T0005245.1 MGP_NODShiLtJ_G0004445.1 mouse_genomes_project 7 147830018 147831149 + Gm15677 antisense antisense MGP_NODShiLtJ_T0085944.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137855253 137866853 + MGP_NODShiLtJ_P0085944 Rbbp6 protein_coding protein_coding MGP_NODShiLtJ_T0085945.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137861408 137896687 + MGP_NODShiLtJ_P0085945 Rbbp6 protein_coding protein_coding MGP_NODShiLtJ_T0085946.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137861544 137876533 + MGP_NODShiLtJ_P0085946 Rbbp6 protein_coding protein_coding MGP_NODShiLtJ_T0085947.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137861762 137896687 + MGP_NODShiLtJ_P0085947 Rbbp6 protein_coding protein_coding MGP_NODShiLtJ_T0085948.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137866484 137870902 + Rbbp6 protein_coding retained_intron MGP_NODShiLtJ_T0085949.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137866702 137875697 + Rbbp6 protein_coding retained_intron MGP_NODShiLtJ_T0085950.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137874644 137896689 + MGP_NODShiLtJ_P0085950 Rbbp6 protein_coding protein_coding MGP_NODShiLtJ_T0085951.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137874682 137877843 + Rbbp6 protein_coding retained_intron MGP_NODShiLtJ_T0085952.1 MGP_NODShiLtJ_G0032766.1 mouse_genomes_project 7 137882159 137884542 + Rbbp6 protein_coding retained_intron MGP_NODShiLtJ_T0008976.1 MGP_NODShiLtJ_G0007216.1 mouse_genomes_project 7 156109232 156110267 - Gm2044 lincRNA lincRNA MGP_NODShiLtJ_T0102189.1 MGP_NODShiLtJ_G0040355.1 mouse_genomes_project 7 96550585 96551461 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0085124.1 MGP_NODShiLtJ_G0032465.1 mouse_genomes_project 7 115664963 115666528 + MGP_NODShiLtJ_P0085124 protein_coding protein_coding MGP_NODShiLtJ_T0010763.1 MGP_NODShiLtJ_G0008896.1 mouse_genomes_project 7 47907249 47907323 - Mir5121 miRNA miRNA MGP_NODShiLtJ_T0082829.1 MGP_NODShiLtJ_G0031886.1 mouse_genomes_project 7 35006947 35008346 + MGP_NODShiLtJ_P0082829 Scgb1b27 protein_coding protein_coding MGP_NODShiLtJ_T0082831.1 MGP_NODShiLtJ_G0031886.1 mouse_genomes_project 7 35007031 35007914 + MGP_NODShiLtJ_P0082831 Scgb1b27 protein_coding protein_coding MGP_NODShiLtJ_T0082270.1 MGP_NODShiLtJ_G0031765.1 mouse_genomes_project 7 28980955 28981657 + MGP_NODShiLtJ_P0082270 Gm10053 protein_coding protein_coding MGP_NODShiLtJ_T0084516.1 MGP_NODShiLtJ_G0032289.1 mouse_genomes_project 7 95996572 95997594 + MGP_NODShiLtJ_P0084516 Olfr297 protein_coding protein_coding MGP_NODShiLtJ_T0087533.1 MGP_NODShiLtJ_G0033097.1 mouse_genomes_project 7 161457723 161462360 + MGP_NODShiLtJ_P0087533 Fgf3 protein_coding protein_coding MGP_NODShiLtJ_T0087534.1 MGP_NODShiLtJ_G0033097.1 mouse_genomes_project 7 161458235 161464077 + MGP_NODShiLtJ_P0087534 Fgf3 protein_coding protein_coding MGP_NODShiLtJ_T0083132.1 MGP_NODShiLtJ_G0031960.1 mouse_genomes_project 7 46404234 46408923 + MGP_NODShiLtJ_P0083132 Klk12 protein_coding protein_coding MGP_NODShiLtJ_T0083133.1 MGP_NODShiLtJ_G0031960.1 mouse_genomes_project 7 46404437 46408813 + MGP_NODShiLtJ_P0083133 Klk12 protein_coding protein_coding MGP_NODShiLtJ_T0085486.1 MGP_NODShiLtJ_G0032661.1 mouse_genomes_project 7 123749736 123753023 - MGP_NODShiLtJ_P0085486 protein_coding protein_coding MGP_NODShiLtJ_T0085336.1 MGP_NODShiLtJ_G0032572.1 mouse_genomes_project 7 118736056 118770688 - MGP_NODShiLtJ_P0085336 Dchs1 protein_coding protein_coding MGP_NODShiLtJ_T0085337.1 MGP_NODShiLtJ_G0032572.1 mouse_genomes_project 7 118740048 118740963 - Dchs1 protein_coding retained_intron MGP_NODShiLtJ_T0085338.1 MGP_NODShiLtJ_G0032572.1 mouse_genomes_project 7 118746310 118770820 - MGP_NODShiLtJ_P0085338 Dchs1 protein_coding protein_coding MGP_NODShiLtJ_T0082826.1 MGP_NODShiLtJ_G0031885.1 mouse_genomes_project 7 34996174 34998130 - MGP_NODShiLtJ_P0082826 Scgb2b27 protein_coding protein_coding MGP_NODShiLtJ_T0082827.1 MGP_NODShiLtJ_G0031885.1 mouse_genomes_project 7 34996185 34998196 - Scgb2b27 protein_coding retained_intron MGP_NODShiLtJ_T0082828.1 MGP_NODShiLtJ_G0031885.1 mouse_genomes_project 7 34996223 34998121 - MGP_NODShiLtJ_P0082828 Scgb2b27 protein_coding protein_coding MGP_NODShiLtJ_T0083982.1 MGP_NODShiLtJ_G0032173.1 mouse_genomes_project 7 73450151 73583280 + Adamts17 protein_coding retained_intron MGP_NODShiLtJ_T0083983.1 MGP_NODShiLtJ_G0032173.1 mouse_genomes_project 7 73450151 73644665 + Adamts17 protein_coding retained_intron MGP_NODShiLtJ_T0083984.1 MGP_NODShiLtJ_G0032173.1 mouse_genomes_project 7 73450151 73775647 + MGP_NODShiLtJ_P0083984 Adamts17 protein_coding protein_coding MGP_NODShiLtJ_T0083985.1 MGP_NODShiLtJ_G0032173.1 mouse_genomes_project 7 73450229 73775651 + MGP_NODShiLtJ_P0083985 Adamts17 protein_coding protein_coding MGP_NODShiLtJ_T0083986.1 MGP_NODShiLtJ_G0032173.1 mouse_genomes_project 7 73452671 73682316 + Adamts17 protein_coding processed_transcript MGP_NODShiLtJ_T0083987.1 MGP_NODShiLtJ_G0032173.1 mouse_genomes_project 7 73460151 73482333 + Adamts17 protein_coding processed_transcript MGP_NODShiLtJ_T0083988.1 MGP_NODShiLtJ_G0032173.1 mouse_genomes_project 7 73523952 73583280 + Adamts17 protein_coding processed_transcript MGP_NODShiLtJ_T0083989.1 MGP_NODShiLtJ_G0032173.1 mouse_genomes_project 7 73665187 73699628 + MGP_NODShiLtJ_P0083989 Adamts17 protein_coding protein_coding MGP_NODShiLtJ_T0008834.1 MGP_NODShiLtJ_G0007128.1 mouse_genomes_project 7 80529755 80533026 + Gm44670 lincRNA lincRNA MGP_NODShiLtJ_T0008835.1 MGP_NODShiLtJ_G0007128.1 mouse_genomes_project 7 80529814 80533461 + Gm44670 lincRNA lincRNA MGP_NODShiLtJ_T0011567.1 MGP_NODShiLtJ_G0009700.1 mouse_genomes_project 7 4282367 4282665 - Gm22649 misc_RNA misc_RNA MGP_NODShiLtJ_T0083966.1 MGP_NODShiLtJ_G0032170.1 mouse_genomes_project 7 73245884 73290921 - MGP_NODShiLtJ_P0083966 Asb7 protein_coding protein_coding MGP_NODShiLtJ_T0083967.1 MGP_NODShiLtJ_G0032170.1 mouse_genomes_project 7 73245884 73290188 - MGP_NODShiLtJ_P0083967 Asb7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083968.1 MGP_NODShiLtJ_G0032170.1 mouse_genomes_project 7 73278324 73290799 - MGP_NODShiLtJ_P0083968 Asb7 protein_coding protein_coding MGP_NODShiLtJ_T0083921.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72222852 72233574 + MGP_NODShiLtJ_P0083921 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0083922.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225091 72233565 + MGP_NODShiLtJ_P0083922 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0083923.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225100 72233576 + MGP_NODShiLtJ_P0083923 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0083924.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225130 72229395 + MGP_NODShiLtJ_P0083924 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0083925.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225150 72229542 + MGP_NODShiLtJ_P0083925 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0083926.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225159 72233563 + MGP_NODShiLtJ_P0083926 Tm2d3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083927.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225160 72233565 + MGP_NODShiLtJ_P0083927 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0083928.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225164 72226911 + MGP_NODShiLtJ_P0083928 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0083929.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225207 72229537 + MGP_NODShiLtJ_P0083929 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0083930.1 MGP_NODShiLtJ_G0032161.1 mouse_genomes_project 7 72225207 72230815 + MGP_NODShiLtJ_P0083930 Tm2d3 protein_coding protein_coding MGP_NODShiLtJ_T0008754.1 MGP_NODShiLtJ_G0007066.1 mouse_genomes_project 7 35806536 35807255 - Gm44837 lincRNA lincRNA MGP_NODShiLtJ_T0083637.1 MGP_NODShiLtJ_G0032088.1 mouse_genomes_project 7 49671973 49674455 + MGP_NODShiLtJ_P0083637 Saa2 protein_coding protein_coding MGP_NODShiLtJ_T0083952.1 MGP_NODShiLtJ_G0032166.1 mouse_genomes_project 7 72664730 72738965 + MGP_NODShiLtJ_P0083952 Chsy1 protein_coding protein_coding MGP_NODShiLtJ_T0015638.1 MGP_NODShiLtJ_G0013746.1 mouse_genomes_project 7 34435575 34436032 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099527.1 MGP_NODShiLtJ_G0037921.1 mouse_genomes_project 7 145500823 145500933 + Gm23847 snRNA snRNA MGP_NODShiLtJ_T0015682.1 MGP_NODShiLtJ_G0013790.1 mouse_genomes_project 7 45992006 45992736 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081100.1 MGP_NODShiLtJ_G0031389.1 mouse_genomes_project 7 2227217 2228343 + MGP_NODShiLtJ_P0081100 protein_coding protein_coding MGP_NODShiLtJ_T0085091.1 MGP_NODShiLtJ_G0032435.1 mouse_genomes_project 7 114899177 114902966 - MGP_NODShiLtJ_P0085091 Olfr559 protein_coding protein_coding MGP_NODShiLtJ_T0080903.1 MGP_NODShiLtJ_G0031345.1 mouse_genomes_project 7 880902 920696 - MGP_NODShiLtJ_P0080903 protein_coding protein_coding MGP_NODShiLtJ_T0005104.1 MGP_NODShiLtJ_G0004343.1 mouse_genomes_project 7 18631889 18633137 + 1700058P15Rik antisense antisense MGP_NODShiLtJ_T0084088.1 MGP_NODShiLtJ_G0032193.1 mouse_genomes_project 7 83860026 84941323 + MGP_NODShiLtJ_P0084088 Agbl1 protein_coding protein_coding MGP_NODShiLtJ_T0084089.1 MGP_NODShiLtJ_G0032193.1 mouse_genomes_project 7 84062283 84407388 + MGP_NODShiLtJ_P0084089 Agbl1 protein_coding protein_coding MGP_NODShiLtJ_T0084090.1 MGP_NODShiLtJ_G0032193.1 mouse_genomes_project 7 84062283 84504192 + MGP_NODShiLtJ_P0084090 Agbl1 protein_coding protein_coding MGP_NODShiLtJ_T0084961.1 MGP_NODShiLtJ_G0032397.1 mouse_genomes_project 7 113884237 113899936 - MGP_NODShiLtJ_P0084961 Inppl1 protein_coding protein_coding MGP_NODShiLtJ_T0084962.1 MGP_NODShiLtJ_G0032397.1 mouse_genomes_project 7 113884244 113899632 - MGP_NODShiLtJ_P0084962 Inppl1 protein_coding protein_coding MGP_NODShiLtJ_T0084963.1 MGP_NODShiLtJ_G0032397.1 mouse_genomes_project 7 113884258 113891093 - Inppl1 protein_coding processed_transcript MGP_NODShiLtJ_T0084964.1 MGP_NODShiLtJ_G0032397.1 mouse_genomes_project 7 113885596 113899613 - MGP_NODShiLtJ_P0084964 Inppl1 protein_coding protein_coding MGP_NODShiLtJ_T0015742.1 MGP_NODShiLtJ_G0013850.1 mouse_genomes_project 7 95620673 95620923 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083635.1 MGP_NODShiLtJ_G0032086.1 mouse_genomes_project 7 49650634 49655046 - MGP_NODShiLtJ_P0083635 Saa4 protein_coding protein_coding MGP_NODShiLtJ_T0102170.1 MGP_NODShiLtJ_G0040336.1 mouse_genomes_project 7 94287425 94288751 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081742.1 MGP_NODShiLtJ_G0031628.1 mouse_genomes_project 7 23755979 23801095 + MGP_NODShiLtJ_P0081742 Zfp180 protein_coding protein_coding MGP_NODShiLtJ_T0081743.1 MGP_NODShiLtJ_G0031628.1 mouse_genomes_project 7 23756070 23797952 + MGP_NODShiLtJ_P0081743 Zfp180 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081744.1 MGP_NODShiLtJ_G0031628.1 mouse_genomes_project 7 23790508 23794977 + Zfp180 protein_coding retained_intron MGP_NODShiLtJ_T0015621.1 MGP_NODShiLtJ_G0013729.1 mouse_genomes_project 7 27274324 27280349 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015811.1 MGP_NODShiLtJ_G0013919.1 mouse_genomes_project 7 149508474 149509510 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083569.1 MGP_NODShiLtJ_G0032069.1 mouse_genomes_project 7 48756767 48758246 + Kdelr1 protein_coding processed_transcript MGP_NODShiLtJ_T0083570.1 MGP_NODShiLtJ_G0032069.1 mouse_genomes_project 7 48756891 48768185 + MGP_NODShiLtJ_P0083570 Kdelr1 protein_coding protein_coding MGP_NODShiLtJ_T0083571.1 MGP_NODShiLtJ_G0032069.1 mouse_genomes_project 7 48765304 48767221 + Kdelr1 protein_coding processed_transcript MGP_NODShiLtJ_T0018200.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48402724 48410079 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018201.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48402864 48410079 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018202.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48403030 48409768 - processed_transcript retained_intron MGP_NODShiLtJ_T0018203.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48403053 48410249 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018204.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48403149 48410079 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018205.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48404013 48410095 - processed_transcript retained_intron MGP_NODShiLtJ_T0018206.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48405069 48405960 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018207.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48405096 48410116 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018208.1 MGP_NODShiLtJ_G0015534.1 mouse_genomes_project 7 48408994 48410078 - processed_transcript retained_intron MGP_NODShiLtJ_T0100749.1 MGP_NODShiLtJ_G0039143.1 mouse_genomes_project 7 64804037 64804106 - snoRNA snoRNA MGP_NODShiLtJ_T0005183.1 MGP_NODShiLtJ_G0004401.1 mouse_genomes_project 7 88262106 88263566 - Gm44949 antisense antisense MGP_NODShiLtJ_T0011583.1 MGP_NODShiLtJ_G0009716.1 mouse_genomes_project 7 129110763 129111081 + Gm22669 misc_RNA misc_RNA MGP_NODShiLtJ_T0098074.1 MGP_NODShiLtJ_G0036486.1 mouse_genomes_project 7 3936096 3936204 + n-R5s150 rRNA rRNA MGP_NODShiLtJ_T0085083.1 MGP_NODShiLtJ_G0032427.1 mouse_genomes_project 7 114755118 114756099 - MGP_NODShiLtJ_P0085083 Olfr553 protein_coding protein_coding MGP_NODShiLtJ_T0085717.1 MGP_NODShiLtJ_G0032706.1 mouse_genomes_project 7 132957963 132964824 - MGP_NODShiLtJ_P0085717 Itpripl2 protein_coding protein_coding MGP_NODShiLtJ_T0102203.1 MGP_NODShiLtJ_G0040369.1 mouse_genomes_project 7 116499441 116500347 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082220.1 MGP_NODShiLtJ_G0031750.1 mouse_genomes_project 7 28682785 28685209 + MGP_NODShiLtJ_P0082220 Eid2b protein_coding protein_coding MGP_NODShiLtJ_T0086548.1 MGP_NODShiLtJ_G0032873.1 mouse_genomes_project 7 143199331 143203720 - MGP_NODShiLtJ_P0086548 Prss8 protein_coding protein_coding MGP_NODShiLtJ_T0086549.1 MGP_NODShiLtJ_G0032873.1 mouse_genomes_project 7 143199331 143203720 - MGP_NODShiLtJ_P0086549 Prss8 protein_coding protein_coding MGP_NODShiLtJ_T0086550.1 MGP_NODShiLtJ_G0032873.1 mouse_genomes_project 7 143200377 143203711 - MGP_NODShiLtJ_P0086550 Prss8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086755.1 MGP_NODShiLtJ_G0032911.1 mouse_genomes_project 7 147017628 147040838 - MGP_NODShiLtJ_P0086755 Ikzf5 protein_coding protein_coding MGP_NODShiLtJ_T0086756.1 MGP_NODShiLtJ_G0032911.1 mouse_genomes_project 7 147019243 147040814 - MGP_NODShiLtJ_P0086756 Ikzf5 protein_coding protein_coding MGP_NODShiLtJ_T0086757.1 MGP_NODShiLtJ_G0032911.1 mouse_genomes_project 7 147022829 147040695 - MGP_NODShiLtJ_P0086757 Ikzf5 protein_coding protein_coding MGP_NODShiLtJ_T0086758.1 MGP_NODShiLtJ_G0032911.1 mouse_genomes_project 7 147023698 147040812 - MGP_NODShiLtJ_P0086758 Ikzf5 protein_coding protein_coding MGP_NODShiLtJ_T0086759.1 MGP_NODShiLtJ_G0032911.1 mouse_genomes_project 7 147027405 147039397 - MGP_NODShiLtJ_P0086759 Ikzf5 protein_coding protein_coding MGP_NODShiLtJ_T0005148.1 MGP_NODShiLtJ_G0004378.1 mouse_genomes_project 7 39064409 39066964 + 4930505M18Rik antisense antisense MGP_NODShiLtJ_T0101190.1 MGP_NODShiLtJ_G0039501.1 mouse_genomes_project 7 28935672 28936227 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0083054.1 MGP_NODShiLtJ_G0031933.1 mouse_genomes_project 7 44155512 44216705 - MGP_NODShiLtJ_P0083054 protein_coding protein_coding MGP_NODShiLtJ_T0015752.1 MGP_NODShiLtJ_G0013860.1 mouse_genomes_project 7 107490448 107491006 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102215.1 MGP_NODShiLtJ_G0040381.1 mouse_genomes_project 7 158603236 158604570 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010800.1 MGP_NODShiLtJ_G0008933.1 mouse_genomes_project 7 95620694 95620790 - Gm23192 miRNA miRNA MGP_NODShiLtJ_T0082221.1 MGP_NODShiLtJ_G0031751.1 mouse_genomes_project 7 28692226 28698712 - MGP_NODShiLtJ_P0082221 protein_coding protein_coding MGP_NODShiLtJ_T0082222.1 MGP_NODShiLtJ_G0031751.1 mouse_genomes_project 7 28692226 28698764 - MGP_NODShiLtJ_P0082222 protein_coding protein_coding MGP_NODShiLtJ_T0082223.1 MGP_NODShiLtJ_G0031751.1 mouse_genomes_project 7 28694634 28695757 - MGP_NODShiLtJ_P0082223 protein_coding protein_coding MGP_NODShiLtJ_T0084998.1 MGP_NODShiLtJ_G0032402.1 mouse_genomes_project 7 113972939 113980626 + MGP_NODShiLtJ_P0084998 Lamtor1 protein_coding protein_coding MGP_NODShiLtJ_T0084999.1 MGP_NODShiLtJ_G0032402.1 mouse_genomes_project 7 113973013 113996904 + MGP_NODShiLtJ_P0084999 Lamtor1 protein_coding protein_coding MGP_NODShiLtJ_T0098086.1 MGP_NODShiLtJ_G0036498.1 mouse_genomes_project 7 144161511 144161629 - n-R5s158 rRNA rRNA MGP_NODShiLtJ_T0100736.1 MGP_NODShiLtJ_G0039130.1 mouse_genomes_project 7 47903356 47903443 - Snord35b snoRNA snoRNA MGP_NODShiLtJ_T0084511.1 MGP_NODShiLtJ_G0032284.1 mouse_genomes_project 7 95717686 95718646 - MGP_NODShiLtJ_P0084511 Olfr305 protein_coding protein_coding MGP_NODShiLtJ_T0015791.1 MGP_NODShiLtJ_G0013899.1 mouse_genomes_project 7 140268240 140268678 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100778.1 MGP_NODShiLtJ_G0039172.1 mouse_genomes_project 7 133340672 133340786 + Gm26147 snoRNA snoRNA MGP_NODShiLtJ_T0087410.1 MGP_NODShiLtJ_G0033071.1 mouse_genomes_project 7 159377689 159384955 - MGP_NODShiLtJ_P0087410 Th protein_coding protein_coding MGP_NODShiLtJ_T0087411.1 MGP_NODShiLtJ_G0033071.1 mouse_genomes_project 7 159377689 159416999 - MGP_NODShiLtJ_P0087411 Th protein_coding protein_coding MGP_NODShiLtJ_T0087412.1 MGP_NODShiLtJ_G0033071.1 mouse_genomes_project 7 159377903 159384902 - MGP_NODShiLtJ_P0087412 Th protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087413.1 MGP_NODShiLtJ_G0033071.1 mouse_genomes_project 7 159379343 159381550 - MGP_NODShiLtJ_P0087413 Th protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087414.1 MGP_NODShiLtJ_G0033071.1 mouse_genomes_project 7 159379371 159384907 - MGP_NODShiLtJ_P0087414 Th protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087415.1 MGP_NODShiLtJ_G0033071.1 mouse_genomes_project 7 159381538 159416991 - MGP_NODShiLtJ_P0087415 Th protein_coding protein_coding MGP_NODShiLtJ_T0015563.1 MGP_NODShiLtJ_G0013671.1 mouse_genomes_project 7 1713800 1714552 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102116.1 MGP_NODShiLtJ_G0040282.1 mouse_genomes_project 7 34514229 34514598 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0015580.1 MGP_NODShiLtJ_G0013688.1 mouse_genomes_project 7 11950011 11953270 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083156.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925563 46935060 + MGP_NODShiLtJ_P0083156 protein_coding protein_coding MGP_NODShiLtJ_T0083157.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925569 46931012 + MGP_NODShiLtJ_P0083157 protein_coding protein_coding MGP_NODShiLtJ_T0083158.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925576 46935058 + MGP_NODShiLtJ_P0083158 protein_coding protein_coding MGP_NODShiLtJ_T0083159.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925595 46930847 + MGP_NODShiLtJ_P0083159 protein_coding protein_coding MGP_NODShiLtJ_T0083160.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925628 46927594 + protein_coding processed_transcript MGP_NODShiLtJ_T0083161.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925628 46935056 + MGP_NODShiLtJ_P0083161 protein_coding protein_coding MGP_NODShiLtJ_T0083162.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925628 46935053 + MGP_NODShiLtJ_P0083162 protein_coding protein_coding MGP_NODShiLtJ_T0083163.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925628 46930944 + MGP_NODShiLtJ_P0083163 protein_coding protein_coding MGP_NODShiLtJ_T0083164.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925630 46935053 + MGP_NODShiLtJ_P0083164 protein_coding protein_coding MGP_NODShiLtJ_T0083165.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925632 46935054 + MGP_NODShiLtJ_P0083165 protein_coding protein_coding MGP_NODShiLtJ_T0083166.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925638 46927008 + protein_coding processed_transcript MGP_NODShiLtJ_T0083167.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925640 46929671 + MGP_NODShiLtJ_P0083167 protein_coding protein_coding MGP_NODShiLtJ_T0083168.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925641 46928897 + protein_coding processed_transcript MGP_NODShiLtJ_T0083169.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925649 46929323 + protein_coding processed_transcript MGP_NODShiLtJ_T0083170.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46925659 46929370 + protein_coding processed_transcript MGP_NODShiLtJ_T0083171.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46926072 46929643 + MGP_NODShiLtJ_P0083171 protein_coding protein_coding MGP_NODShiLtJ_T0083172.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46926283 46935053 + MGP_NODShiLtJ_P0083172 protein_coding protein_coding MGP_NODShiLtJ_T0083173.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46927093 46934450 + MGP_NODShiLtJ_P0083173 protein_coding protein_coding MGP_NODShiLtJ_T0083174.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46928435 46935056 + MGP_NODShiLtJ_P0083174 protein_coding protein_coding MGP_NODShiLtJ_T0083175.1 MGP_NODShiLtJ_G0031972.1 mouse_genomes_project 7 46928806 46934372 + MGP_NODShiLtJ_P0083175 protein_coding protein_coding MGP_NODShiLtJ_T0002210.1 MGP_NODShiLtJ_G0002121.1 mouse_genomes_project 7 81152318 81152475 + TEC TEC MGP_NODShiLtJ_T0098452.1 MGP_NODShiLtJ_G0036852.1 mouse_genomes_project 7 139160541 139273245 + Gm15338 sense_intronic sense_intronic MGP_NODShiLtJ_T0098450.1 MGP_NODShiLtJ_G0036850.1 mouse_genomes_project 7 134054119 134056422 - Gm26967 sense_intronic sense_intronic MGP_NODShiLtJ_T0081724.1 MGP_NODShiLtJ_G0031612.1 mouse_genomes_project 7 19430083 19469709 + MGP_NODShiLtJ_P0081724 Ceacam20 protein_coding protein_coding MGP_NODShiLtJ_T0081346.1 MGP_NODShiLtJ_G0031500.1 mouse_genomes_project 7 14736550 14741575 - MGP_NODShiLtJ_P0081346 protein_coding protein_coding MGP_NODShiLtJ_T0015611.1 MGP_NODShiLtJ_G0013719.1 mouse_genomes_project 7 25330728 25332040 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102103.1 MGP_NODShiLtJ_G0040270.1 mouse_genomes_project 7 16973784 17036003 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0102110.1 MGP_NODShiLtJ_G0040276.1 mouse_genomes_project 7 26856269 26863540 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099505.1 MGP_NODShiLtJ_G0037899.1 mouse_genomes_project 7 110263987 110264151 + Gm23040 snRNA snRNA MGP_NODShiLtJ_T0081956.1 MGP_NODShiLtJ_G0031680.1 mouse_genomes_project 7 25280157 25295334 - MGP_NODShiLtJ_P0081956 Cxcl17 protein_coding protein_coding MGP_NODShiLtJ_T0081957.1 MGP_NODShiLtJ_G0031680.1 mouse_genomes_project 7 25280157 25295334 - MGP_NODShiLtJ_P0081957 Cxcl17 protein_coding protein_coding MGP_NODShiLtJ_T0086861.1 MGP_NODShiLtJ_G0032933.1 mouse_genomes_project 7 149549119 149664123 + MGP_NODShiLtJ_P0086861 Fank1 protein_coding protein_coding MGP_NODShiLtJ_T0086862.1 MGP_NODShiLtJ_G0032933.1 mouse_genomes_project 7 149549149 149657884 + MGP_NODShiLtJ_P0086862 Fank1 protein_coding protein_coding MGP_NODShiLtJ_T0086863.1 MGP_NODShiLtJ_G0032933.1 mouse_genomes_project 7 149549200 149663456 + MGP_NODShiLtJ_P0086863 Fank1 protein_coding protein_coding MGP_NODShiLtJ_T0086864.1 MGP_NODShiLtJ_G0032934.1 mouse_genomes_project 7 149666709 150033108 - MGP_NODShiLtJ_P0086864 Adam12 protein_coding protein_coding MGP_NODShiLtJ_T0086865.1 MGP_NODShiLtJ_G0032934.1 mouse_genomes_project 7 149671022 149755817 - MGP_NODShiLtJ_P0086865 Adam12 protein_coding protein_coding MGP_NODShiLtJ_T0086866.1 MGP_NODShiLtJ_G0032934.1 mouse_genomes_project 7 149770507 150040051 - MGP_NODShiLtJ_P0086866 Adam12 protein_coding protein_coding MGP_NODShiLtJ_T0086867.1 MGP_NODShiLtJ_G0032934.1 mouse_genomes_project 7 149777807 150040192 - MGP_NODShiLtJ_P0086867 Adam12 protein_coding protein_coding MGP_NODShiLtJ_T0086868.1 MGP_NODShiLtJ_G0032934.1 mouse_genomes_project 7 149975243 149976286 - Adam12 protein_coding retained_intron MGP_NODShiLtJ_T0086869.1 MGP_NODShiLtJ_G0032934.1 mouse_genomes_project 7 149995784 150033383 - Adam12 protein_coding processed_transcript MGP_NODShiLtJ_T0086770.1 MGP_NODShiLtJ_G0032915.1 mouse_genomes_project 7 147196494 147211242 + MGP_NODShiLtJ_P0086770 Bub3 protein_coding protein_coding MGP_NODShiLtJ_T0087007.1 MGP_NODShiLtJ_G0032973.1 mouse_genomes_project 7 156300422 156313417 + MGP_NODShiLtJ_P0087007 Mtg1 protein_coding protein_coding MGP_NODShiLtJ_T0087008.1 MGP_NODShiLtJ_G0032973.1 mouse_genomes_project 7 156300507 156304983 + Mtg1 protein_coding retained_intron MGP_NODShiLtJ_T0087009.1 MGP_NODShiLtJ_G0032973.1 mouse_genomes_project 7 156300521 156310101 + Mtg1 protein_coding retained_intron MGP_NODShiLtJ_T0087010.1 MGP_NODShiLtJ_G0032973.1 mouse_genomes_project 7 156300821 156301255 + Mtg1 protein_coding processed_transcript MGP_NODShiLtJ_T0087011.1 MGP_NODShiLtJ_G0032973.1 mouse_genomes_project 7 156303068 156309789 + Mtg1 protein_coding retained_intron MGP_NODShiLtJ_T0087012.1 MGP_NODShiLtJ_G0032973.1 mouse_genomes_project 7 156311587 156313076 + Mtg1 protein_coding processed_transcript MGP_NODShiLtJ_T0085982.1 MGP_NODShiLtJ_G0032770.1 mouse_genomes_project 7 138298682 138355460 + MGP_NODShiLtJ_P0085982 Lcmt1 protein_coding protein_coding MGP_NODShiLtJ_T0085983.1 MGP_NODShiLtJ_G0032770.1 mouse_genomes_project 7 138298756 138355452 + MGP_NODShiLtJ_P0085983 Lcmt1 protein_coding protein_coding MGP_NODShiLtJ_T0085984.1 MGP_NODShiLtJ_G0032770.1 mouse_genomes_project 7 138333687 138347845 + Lcmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0085985.1 MGP_NODShiLtJ_G0032770.1 mouse_genomes_project 7 138343232 138355446 + Lcmt1 protein_coding retained_intron MGP_NODShiLtJ_T0085986.1 MGP_NODShiLtJ_G0032770.1 mouse_genomes_project 7 138352967 138355450 + Lcmt1 protein_coding retained_intron MGP_NODShiLtJ_T0008969.1 MGP_NODShiLtJ_G0007212.1 mouse_genomes_project 7 149390965 149392342 - Gm28747 lincRNA lincRNA MGP_NODShiLtJ_T0008767.1 MGP_NODShiLtJ_G0007079.1 mouse_genomes_project 7 38691575 38695939 - lincRNA lincRNA MGP_NODShiLtJ_T0086940.1 MGP_NODShiLtJ_G0032957.1 mouse_genomes_project 7 155487491 155698599 + MGP_NODShiLtJ_P0086940 Inpp5a protein_coding protein_coding MGP_NODShiLtJ_T0086941.1 MGP_NODShiLtJ_G0032957.1 mouse_genomes_project 7 155487492 155698599 + MGP_NODShiLtJ_P0086941 Inpp5a protein_coding protein_coding MGP_NODShiLtJ_T0086942.1 MGP_NODShiLtJ_G0032957.1 mouse_genomes_project 7 155498869 155698172 + MGP_NODShiLtJ_P0086942 Inpp5a protein_coding protein_coding MGP_NODShiLtJ_T0086943.1 MGP_NODShiLtJ_G0032957.1 mouse_genomes_project 7 155563635 155621778 + Inpp5a protein_coding processed_transcript MGP_NODShiLtJ_T0086944.1 MGP_NODShiLtJ_G0032957.1 mouse_genomes_project 7 155591037 155607285 + Inpp5a protein_coding processed_transcript MGP_NODShiLtJ_T0086945.1 MGP_NODShiLtJ_G0032957.1 mouse_genomes_project 7 155640012 155694156 + Inpp5a protein_coding processed_transcript MGP_NODShiLtJ_T0102200.1 MGP_NODShiLtJ_G0040366.1 mouse_genomes_project 7 116284973 116286066 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100752.1 MGP_NODShiLtJ_G0039146.1 mouse_genomes_project 7 65253934 65254001 - Snord64 snoRNA snoRNA MGP_NODShiLtJ_T0010743.1 MGP_NODShiLtJ_G0008876.1 mouse_genomes_project 7 25767486 25767582 - Gm24865 miRNA miRNA MGP_NODShiLtJ_T0083343.1 MGP_NODShiLtJ_G0032004.1 mouse_genomes_project 7 47708016 47724615 + MGP_NODShiLtJ_P0083343 Tsks protein_coding protein_coding MGP_NODShiLtJ_T0083344.1 MGP_NODShiLtJ_G0032004.1 mouse_genomes_project 7 47708016 47724615 + MGP_NODShiLtJ_P0083344 Tsks protein_coding protein_coding MGP_NODShiLtJ_T0083400.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48021680 48026889 - MGP_NODShiLtJ_P0083400 Cd37 protein_coding protein_coding MGP_NODShiLtJ_T0083401.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48021685 48026864 - Cd37 protein_coding retained_intron MGP_NODShiLtJ_T0083402.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48021689 48027164 - MGP_NODShiLtJ_P0083402 Cd37 protein_coding protein_coding MGP_NODShiLtJ_T0083403.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48021691 48023548 - Cd37 protein_coding processed_transcript MGP_NODShiLtJ_T0083404.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48021939 48025136 - Cd37 protein_coding processed_transcript MGP_NODShiLtJ_T0083405.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48022218 48026923 - MGP_NODShiLtJ_P0083405 Cd37 protein_coding protein_coding MGP_NODShiLtJ_T0083406.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48022398 48023507 - Cd37 protein_coding processed_transcript MGP_NODShiLtJ_T0083407.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48022786 48027106 - MGP_NODShiLtJ_P0083407 Cd37 protein_coding protein_coding MGP_NODShiLtJ_T0083408.1 MGP_NODShiLtJ_G0032028.1 mouse_genomes_project 7 48025782 48026845 - Cd37 protein_coding retained_intron MGP_NODShiLtJ_T0081330.1 MGP_NODShiLtJ_G0031493.1 mouse_genomes_project 7 13182775 13185348 - MGP_NODShiLtJ_P0081330 protein_coding protein_coding MGP_NODShiLtJ_T0010733.1 MGP_NODShiLtJ_G0008866.1 mouse_genomes_project 7 9296858 9296928 - Mir297-1 miRNA miRNA MGP_NODShiLtJ_T0081078.1 MGP_NODShiLtJ_G0031378.1 mouse_genomes_project 7 2038718 2080521 + MGP_NODShiLtJ_P0081078 Isoc2a protein_coding protein_coding MGP_NODShiLtJ_T0005142.1 MGP_NODShiLtJ_G0004373.1 mouse_genomes_project 7 35827809 35836465 + Gm12781 antisense antisense MGP_NODShiLtJ_T0083969.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73291213 73311264 + MGP_NODShiLtJ_P0083969 Lins1 protein_coding protein_coding MGP_NODShiLtJ_T0083970.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73291218 73317622 + MGP_NODShiLtJ_P0083970 Lins1 protein_coding protein_coding MGP_NODShiLtJ_T0083971.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73291224 73311128 + MGP_NODShiLtJ_P0083971 Lins1 protein_coding protein_coding MGP_NODShiLtJ_T0083972.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73291273 73312809 + Lins1 protein_coding retained_intron MGP_NODShiLtJ_T0083973.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73291282 73317619 + MGP_NODShiLtJ_P0083973 Lins1 protein_coding protein_coding MGP_NODShiLtJ_T0083974.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73291282 73320131 + MGP_NODShiLtJ_P0083974 Lins1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083975.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73291295 73317622 + MGP_NODShiLtJ_P0083975 Lins1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083976.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73310936 73317562 + MGP_NODShiLtJ_P0083976 Lins1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083977.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73311084 73313282 + MGP_NODShiLtJ_P0083977 Lins1 protein_coding protein_coding MGP_NODShiLtJ_T0083978.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73311229 73313471 + MGP_NODShiLtJ_P0083978 Lins1 protein_coding protein_coding MGP_NODShiLtJ_T0083979.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73312315 73316725 + MGP_NODShiLtJ_P0083979 Lins1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083980.1 MGP_NODShiLtJ_G0032171.1 mouse_genomes_project 7 73313052 73320129 + Lins1 protein_coding retained_intron MGP_NODShiLtJ_T0086534.1 MGP_NODShiLtJ_G0032870.1 mouse_genomes_project 7 143164961 143167507 - MGP_NODShiLtJ_P0086534 Vkorc1 protein_coding protein_coding MGP_NODShiLtJ_T0086535.1 MGP_NODShiLtJ_G0032870.1 mouse_genomes_project 7 143164963 143167141 - MGP_NODShiLtJ_P0086535 Vkorc1 protein_coding protein_coding MGP_NODShiLtJ_T0086536.1 MGP_NODShiLtJ_G0032870.1 mouse_genomes_project 7 143165136 143167199 - MGP_NODShiLtJ_P0086536 Vkorc1 protein_coding protein_coding MGP_NODShiLtJ_T0081160.1 MGP_NODShiLtJ_G0031416.1 mouse_genomes_project 7 3841128 3842189 + MGP_NODShiLtJ_P0081160 Olfr1344 protein_coding protein_coding MGP_NODShiLtJ_T0008790.1 MGP_NODShiLtJ_G0007093.1 mouse_genomes_project 7 46503245 46504573 - Gm44707 lincRNA lincRNA MGP_NODShiLtJ_T0011578.1 MGP_NODShiLtJ_G0009711.1 mouse_genomes_project 7 82790761 82791084 + Gm24858 misc_RNA misc_RNA MGP_NODShiLtJ_T0086093.1 MGP_NODShiLtJ_G0032790.1 mouse_genomes_project 7 141616637 141620585 + MGP_NODShiLtJ_P0086093 protein_coding protein_coding MGP_NODShiLtJ_T0102096.1 MGP_NODShiLtJ_G0040263.1 mouse_genomes_project 7 13555362 13555656 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0082385.1 MGP_NODShiLtJ_G0031790.1 mouse_genomes_project 7 29698244 29706330 - MGP_NODShiLtJ_P0082385 Psmd8 protein_coding protein_coding MGP_NODShiLtJ_T0082386.1 MGP_NODShiLtJ_G0031790.1 mouse_genomes_project 7 29698244 29706358 - MGP_NODShiLtJ_P0082386 Psmd8 protein_coding protein_coding MGP_NODShiLtJ_T0082387.1 MGP_NODShiLtJ_G0031790.1 mouse_genomes_project 7 29698244 29706209 - MGP_NODShiLtJ_P0082387 Psmd8 protein_coding protein_coding MGP_NODShiLtJ_T0099484.1 MGP_NODShiLtJ_G0037878.1 mouse_genomes_project 7 48049728 48049830 - Gm23585 snRNA snRNA MGP_NODShiLtJ_T0002251.1 MGP_NODShiLtJ_G0002162.1 mouse_genomes_project 7 137324638 137327361 + TEC TEC MGP_NODShiLtJ_T0085491.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124006469 124375841 - MGP_NODShiLtJ_P0085491 Sbf2 protein_coding protein_coding MGP_NODShiLtJ_T0085492.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124006478 124375839 - MGP_NODShiLtJ_P0085492 Sbf2 protein_coding protein_coding MGP_NODShiLtJ_T0085493.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124019247 124042704 - Sbf2 protein_coding retained_intron MGP_NODShiLtJ_T0085494.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124029370 124067145 - MGP_NODShiLtJ_P0085494 Sbf2 protein_coding protein_coding MGP_NODShiLtJ_T0085495.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124041601 124056713 - Sbf2 protein_coding retained_intron MGP_NODShiLtJ_T0085496.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124043745 124076168 - MGP_NODShiLtJ_P0085496 Sbf2 protein_coding protein_coding MGP_NODShiLtJ_T0085497.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124089169 124375833 - Sbf2 protein_coding retained_intron MGP_NODShiLtJ_T0085498.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124089485 124375815 - Sbf2 protein_coding retained_intron MGP_NODShiLtJ_T0085499.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124136259 124159075 - MGP_NODShiLtJ_P0085499 Sbf2 protein_coding protein_coding MGP_NODShiLtJ_T0085500.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124141383 124375801 - Sbf2 protein_coding retained_intron MGP_NODShiLtJ_T0085501.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124158070 124375824 - MGP_NODShiLtJ_P0085501 Sbf2 protein_coding protein_coding MGP_NODShiLtJ_T0085502.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124158257 124182183 - MGP_NODShiLtJ_P0085502 Sbf2 protein_coding protein_coding MGP_NODShiLtJ_T0085503.1 MGP_NODShiLtJ_G0032665.1 mouse_genomes_project 7 124182126 124375680 - MGP_NODShiLtJ_P0085503 Sbf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085606.1 MGP_NODShiLtJ_G0032686.1 mouse_genomes_project 7 127796797 128085078 + MGP_NODShiLtJ_P0085606 Spon1 protein_coding protein_coding MGP_NODShiLtJ_T0085607.1 MGP_NODShiLtJ_G0032686.1 mouse_genomes_project 7 127796973 127968737 + MGP_NODShiLtJ_P0085607 Spon1 protein_coding protein_coding MGP_NODShiLtJ_T0082984.1 MGP_NODShiLtJ_G0031914.1 mouse_genomes_project 7 38044040 38122553 + MGP_NODShiLtJ_P0082984 Tshz3 protein_coding protein_coding MGP_NODShiLtJ_T0082985.1 MGP_NODShiLtJ_G0031914.1 mouse_genomes_project 7 38044115 38048012 + Tshz3 protein_coding processed_transcript MGP_NODShiLtJ_T0083600.1 MGP_NODShiLtJ_G0032078.1 mouse_genomes_project 7 49100174 49146369 - MGP_NODShiLtJ_P0083600 Ush1c protein_coding protein_coding MGP_NODShiLtJ_T0083601.1 MGP_NODShiLtJ_G0032078.1 mouse_genomes_project 7 49100181 49146380 - MGP_NODShiLtJ_P0083601 Ush1c protein_coding protein_coding MGP_NODShiLtJ_T0083602.1 MGP_NODShiLtJ_G0032078.1 mouse_genomes_project 7 49100181 49146367 - MGP_NODShiLtJ_P0083602 Ush1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083603.1 MGP_NODShiLtJ_G0032078.1 mouse_genomes_project 7 49100455 49146341 - MGP_NODShiLtJ_P0083603 Ush1c protein_coding protein_coding MGP_NODShiLtJ_T0083604.1 MGP_NODShiLtJ_G0032078.1 mouse_genomes_project 7 49100474 49146375 - MGP_NODShiLtJ_P0083604 Ush1c protein_coding protein_coding MGP_NODShiLtJ_T0083605.1 MGP_NODShiLtJ_G0032078.1 mouse_genomes_project 7 49100475 49138196 - MGP_NODShiLtJ_P0083605 Ush1c protein_coding protein_coding MGP_NODShiLtJ_T0083606.1 MGP_NODShiLtJ_G0032078.1 mouse_genomes_project 7 49100494 49108474 - Ush1c protein_coding retained_intron MGP_NODShiLtJ_T0083607.1 MGP_NODShiLtJ_G0032078.1 mouse_genomes_project 7 49105849 49127649 - Ush1c protein_coding processed_transcript MGP_NODShiLtJ_T0086718.1 MGP_NODShiLtJ_G0032900.1 mouse_genomes_project 7 146065354 146266490 + MGP_NODShiLtJ_P0086718 Tacc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0086719.1 MGP_NODShiLtJ_G0032900.1 mouse_genomes_project 7 146065354 146266955 + MGP_NODShiLtJ_P0086719 Tacc2 protein_coding protein_coding MGP_NODShiLtJ_T0086720.1 MGP_NODShiLtJ_G0032900.1 mouse_genomes_project 7 146065354 146266953 + MGP_NODShiLtJ_P0086720 Tacc2 protein_coding protein_coding MGP_NODShiLtJ_T0086721.1 MGP_NODShiLtJ_G0032900.1 mouse_genomes_project 7 146194810 146266955 + MGP_NODShiLtJ_P0086721 Tacc2 protein_coding protein_coding MGP_NODShiLtJ_T0085458.1 MGP_NODShiLtJ_G0032653.1 mouse_genomes_project 7 123368551 123380092 - MGP_NODShiLtJ_P0085458 protein_coding protein_coding MGP_NODShiLtJ_T0085459.1 MGP_NODShiLtJ_G0032653.1 mouse_genomes_project 7 123368554 123380156 - MGP_NODShiLtJ_P0085459 protein_coding protein_coding MGP_NODShiLtJ_T0085460.1 MGP_NODShiLtJ_G0032653.1 mouse_genomes_project 7 123372338 123377334 - MGP_NODShiLtJ_P0085460 protein_coding protein_coding MGP_NODShiLtJ_T0081324.1 MGP_NODShiLtJ_G0031490.1 mouse_genomes_project 7 12995027 13030055 - MGP_NODShiLtJ_P0081324 Sult2a8 protein_coding protein_coding MGP_NODShiLtJ_T0081325.1 MGP_NODShiLtJ_G0031490.1 mouse_genomes_project 7 12995030 13039274 - MGP_NODShiLtJ_P0081325 Sult2a8 protein_coding protein_coding MGP_NODShiLtJ_T0081326.1 MGP_NODShiLtJ_G0031490.1 mouse_genomes_project 7 13000880 13039457 - MGP_NODShiLtJ_P0081326 Sult2a8 protein_coding protein_coding MGP_NODShiLtJ_T0081101.1 MGP_NODShiLtJ_G0031390.1 mouse_genomes_project 7 2227535 2231545 - MGP_NODShiLtJ_P0081101 Zfp784 protein_coding protein_coding MGP_NODShiLtJ_T0087141.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157550750 157587386 + MGP_NODShiLtJ_P0087141 Phrf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087142.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157550755 157587270 + MGP_NODShiLtJ_P0087142 Phrf1 protein_coding protein_coding MGP_NODShiLtJ_T0087143.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157556141 157569278 + MGP_NODShiLtJ_P0087143 Phrf1 protein_coding protein_coding MGP_NODShiLtJ_T0087144.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157565459 157587239 + MGP_NODShiLtJ_P0087144 Phrf1 protein_coding protein_coding MGP_NODShiLtJ_T0087145.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157579465 157582713 + Phrf1 protein_coding processed_transcript MGP_NODShiLtJ_T0087146.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157580646 157582473 + Phrf1 protein_coding retained_intron MGP_NODShiLtJ_T0087147.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157580647 157581530 + Phrf1 protein_coding retained_intron MGP_NODShiLtJ_T0087148.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157583833 157587394 + MGP_NODShiLtJ_P0087148 Phrf1 protein_coding protein_coding MGP_NODShiLtJ_T0087149.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157584301 157585231 + Phrf1 protein_coding processed_transcript MGP_NODShiLtJ_T0087150.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157585040 157587391 + MGP_NODShiLtJ_P0087150 Phrf1 protein_coding protein_coding MGP_NODShiLtJ_T0087151.1 MGP_NODShiLtJ_G0033025.1 mouse_genomes_project 7 157586322 157587344 + Phrf1 protein_coding processed_transcript MGP_NODShiLtJ_T0083510.1 MGP_NODShiLtJ_G0032053.1 mouse_genomes_project 7 48482481 48488274 + Mamstr protein_coding retained_intron MGP_NODShiLtJ_T0083511.1 MGP_NODShiLtJ_G0032053.1 mouse_genomes_project 7 48482481 48483495 + Mamstr protein_coding retained_intron MGP_NODShiLtJ_T0083512.1 MGP_NODShiLtJ_G0032053.1 mouse_genomes_project 7 48482497 48487716 + MGP_NODShiLtJ_P0083512 Mamstr protein_coding protein_coding MGP_NODShiLtJ_T0083513.1 MGP_NODShiLtJ_G0032053.1 mouse_genomes_project 7 48483984 48489026 + Mamstr protein_coding retained_intron MGP_NODShiLtJ_T0083514.1 MGP_NODShiLtJ_G0032053.1 mouse_genomes_project 7 48484280 48488246 + Mamstr protein_coding retained_intron MGP_NODShiLtJ_T0083515.1 MGP_NODShiLtJ_G0032053.1 mouse_genomes_project 7 48486888 48487514 + MGP_NODShiLtJ_P0083515 Mamstr protein_coding protein_coding MGP_NODShiLtJ_T0085159.1 MGP_NODShiLtJ_G0032498.1 mouse_genomes_project 7 116485203 116717958 - MGP_NODShiLtJ_P0085159 protein_coding protein_coding MGP_NODShiLtJ_T0080864.1 MGP_NODShiLtJ_G0031337.1 mouse_genomes_project 7 587408 592901 - MGP_NODShiLtJ_P0080864 Leng1 protein_coding protein_coding MGP_NODShiLtJ_T0081431.1 MGP_NODShiLtJ_G0031524.1 mouse_genomes_project 7 15723453 15730945 - MGP_NODShiLtJ_P0081431 Fkrp protein_coding protein_coding MGP_NODShiLtJ_T0081432.1 MGP_NODShiLtJ_G0031524.1 mouse_genomes_project 7 15725818 15729733 - MGP_NODShiLtJ_P0081432 Fkrp protein_coding protein_coding MGP_NODShiLtJ_T0081433.1 MGP_NODShiLtJ_G0031524.1 mouse_genomes_project 7 15727323 15729905 - Fkrp protein_coding retained_intron MGP_NODShiLtJ_T0081434.1 MGP_NODShiLtJ_G0031524.1 mouse_genomes_project 7 15728959 15730945 - Fkrp protein_coding retained_intron MGP_NODShiLtJ_T0002258.1 MGP_NODShiLtJ_G0002169.1 mouse_genomes_project 7 141520053 141521941 + TEC TEC MGP_NODShiLtJ_T0082836.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35236075 35265831 - MGP_NODShiLtJ_P0082836 Uba2 protein_coding protein_coding MGP_NODShiLtJ_T0082837.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35236101 35237474 - Uba2 protein_coding retained_intron MGP_NODShiLtJ_T0082838.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35236470 35239936 - MGP_NODShiLtJ_P0082838 Uba2 protein_coding protein_coding MGP_NODShiLtJ_T0082839.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35236777 35238657 - Uba2 protein_coding retained_intron MGP_NODShiLtJ_T0082840.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35237816 35241649 - Uba2 protein_coding retained_intron MGP_NODShiLtJ_T0082841.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35246422 35258014 - MGP_NODShiLtJ_P0082841 Uba2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082842.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35249425 35253894 - Uba2 protein_coding retained_intron MGP_NODShiLtJ_T0082843.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35250070 35261674 - MGP_NODShiLtJ_P0082843 Uba2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082844.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35257960 35266855 - MGP_NODShiLtJ_P0082844 Uba2 protein_coding protein_coding MGP_NODShiLtJ_T0082845.1 MGP_NODShiLtJ_G0031889.1 mouse_genomes_project 7 35259293 35261597 - Uba2 protein_coding retained_intron MGP_NODShiLtJ_T0005190.1 MGP_NODShiLtJ_G0004407.1 mouse_genomes_project 7 92158404 92159793 + 2310044K18Rik antisense antisense MGP_NODShiLtJ_T0083762.1 MGP_NODShiLtJ_G0032128.1 mouse_genomes_project 7 60707583 60711994 + MGP_NODShiLtJ_P0083762 Siglech protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083763.1 MGP_NODShiLtJ_G0032128.1 mouse_genomes_project 7 60707589 60712947 + MGP_NODShiLtJ_P0083763 Siglech protein_coding protein_coding MGP_NODShiLtJ_T0083764.1 MGP_NODShiLtJ_G0032128.1 mouse_genomes_project 7 60707589 60712947 + MGP_NODShiLtJ_P0083764 Siglech protein_coding protein_coding MGP_NODShiLtJ_T0083765.1 MGP_NODShiLtJ_G0032128.1 mouse_genomes_project 7 60707631 60719290 + MGP_NODShiLtJ_P0083765 Siglech protein_coding protein_coding MGP_NODShiLtJ_T0083766.1 MGP_NODShiLtJ_G0032128.1 mouse_genomes_project 7 60707631 60719091 + MGP_NODShiLtJ_P0083766 Siglech protein_coding protein_coding MGP_NODShiLtJ_T0083767.1 MGP_NODShiLtJ_G0032128.1 mouse_genomes_project 7 60707641 60718075 + MGP_NODShiLtJ_P0083767 Siglech protein_coding protein_coding MGP_NODShiLtJ_T0083768.1 MGP_NODShiLtJ_G0032128.1 mouse_genomes_project 7 60707641 60718029 + MGP_NODShiLtJ_P0083768 Siglech protein_coding protein_coding MGP_NODShiLtJ_T0083769.1 MGP_NODShiLtJ_G0032128.1 mouse_genomes_project 7 60707666 60719382 + MGP_NODShiLtJ_P0083769 Siglech protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083961.1 MGP_NODShiLtJ_G0032169.1 mouse_genomes_project 7 72982549 73020868 - MGP_NODShiLtJ_P0083961 Aldh1a3 protein_coding protein_coding MGP_NODShiLtJ_T0083962.1 MGP_NODShiLtJ_G0032169.1 mouse_genomes_project 7 72991528 72997636 - Aldh1a3 protein_coding retained_intron MGP_NODShiLtJ_T0083963.1 MGP_NODShiLtJ_G0032169.1 mouse_genomes_project 7 72993682 73012567 - MGP_NODShiLtJ_P0083963 Aldh1a3 protein_coding protein_coding MGP_NODShiLtJ_T0083964.1 MGP_NODShiLtJ_G0032169.1 mouse_genomes_project 7 73000144 73019940 - Aldh1a3 protein_coding processed_transcript MGP_NODShiLtJ_T0083965.1 MGP_NODShiLtJ_G0032169.1 mouse_genomes_project 7 73000590 73019052 - Aldh1a3 protein_coding processed_transcript MGP_NODShiLtJ_T0085885.1 MGP_NODShiLtJ_G0032754.1 mouse_genomes_project 7 136691189 136694217 - Cog7 protein_coding retained_intron MGP_NODShiLtJ_T0085886.1 MGP_NODShiLtJ_G0032754.1 mouse_genomes_project 7 136691732 136798968 - MGP_NODShiLtJ_P0085886 Cog7 protein_coding protein_coding MGP_NODShiLtJ_T0085888.1 MGP_NODShiLtJ_G0032754.1 mouse_genomes_project 7 136737340 136798968 - MGP_NODShiLtJ_P0085888 Cog7 protein_coding protein_coding MGP_NODShiLtJ_T0085889.1 MGP_NODShiLtJ_G0032754.1 mouse_genomes_project 7 136743356 136798951 - Cog7 protein_coding retained_intron MGP_NODShiLtJ_T0086735.1 MGP_NODShiLtJ_G0032903.1 mouse_genomes_project 7 146455489 146502480 + Htra1 protein_coding retained_intron MGP_NODShiLtJ_T0086736.1 MGP_NODShiLtJ_G0032903.1 mouse_genomes_project 7 146455581 146508192 + MGP_NODShiLtJ_P0086736 Htra1 protein_coding protein_coding MGP_NODShiLtJ_T0086737.1 MGP_NODShiLtJ_G0032903.1 mouse_genomes_project 7 146463957 146508192 + Htra1 protein_coding processed_transcript MGP_NODShiLtJ_T0086738.1 MGP_NODShiLtJ_G0032903.1 mouse_genomes_project 7 146504201 146504975 + Htra1 protein_coding retained_intron MGP_NODShiLtJ_T0086739.1 MGP_NODShiLtJ_G0032903.1 mouse_genomes_project 7 146505261 146507928 + Htra1 protein_coding processed_transcript MGP_NODShiLtJ_T0002236.1 MGP_NODShiLtJ_G0002147.1 mouse_genomes_project 7 88401485 88403771 + TEC TEC MGP_NODShiLtJ_T0005121.1 MGP_NODShiLtJ_G0004356.1 mouse_genomes_project 7 27791065 27798252 - Gm15541 antisense antisense MGP_NODShiLtJ_T0085369.1 MGP_NODShiLtJ_G0032596.1 mouse_genomes_project 7 120372204 120373158 + MGP_NODShiLtJ_P0085369 Olfr714 protein_coding protein_coding MGP_NODShiLtJ_T0085090.1 MGP_NODShiLtJ_G0032434.1 mouse_genomes_project 7 114879755 114880712 - MGP_NODShiLtJ_P0085090 Olfr33 protein_coding protein_coding MGP_NODShiLtJ_T0085997.1 MGP_NODShiLtJ_G0032775.1 mouse_genomes_project 7 140525129 140549510 - MGP_NODShiLtJ_P0085997 Nsmce1 protein_coding protein_coding MGP_NODShiLtJ_T0085998.1 MGP_NODShiLtJ_G0032775.1 mouse_genomes_project 7 140528443 140549313 - MGP_NODShiLtJ_P0085998 Nsmce1 protein_coding protein_coding MGP_NODShiLtJ_T0085999.1 MGP_NODShiLtJ_G0032775.1 mouse_genomes_project 7 140528497 140535925 - Nsmce1 protein_coding processed_transcript MGP_NODShiLtJ_T0081192.1 MGP_NODShiLtJ_G0031438.1 mouse_genomes_project 7 8501534 8502431 + MGP_NODShiLtJ_P0081192 Vmn1r70 protein_coding protein_coding MGP_NODShiLtJ_T0084649.1 MGP_NODShiLtJ_G0032329.1 mouse_genomes_project 7 108964247 108983712 + MGP_NODShiLtJ_P0084649 Kctd21 protein_coding protein_coding MGP_NODShiLtJ_T0082899.1 MGP_NODShiLtJ_G0031899.1 mouse_genomes_project 7 36336287 36338922 + MGP_NODShiLtJ_P0082899 Cebpa protein_coding protein_coding MGP_NODShiLtJ_T0082900.1 MGP_NODShiLtJ_G0031899.1 mouse_genomes_project 7 36336297 36338922 + MGP_NODShiLtJ_P0082900 Cebpa protein_coding protein_coding MGP_NODShiLtJ_T0083960.1 MGP_NODShiLtJ_G0032168.1 mouse_genomes_project 7 72955575 72977968 + MGP_NODShiLtJ_P0083960 Gm10974 protein_coding protein_coding MGP_NODShiLtJ_T0085841.1 MGP_NODShiLtJ_G0032739.1 mouse_genomes_project 7 135388699 135399756 - MGP_NODShiLtJ_P0085841 Pdzd9 protein_coding protein_coding MGP_NODShiLtJ_T0085842.1 MGP_NODShiLtJ_G0032739.1 mouse_genomes_project 7 135388757 135399663 - Pdzd9 protein_coding processed_transcript MGP_NODShiLtJ_T0086946.1 MGP_NODShiLtJ_G0032958.1 mouse_genomes_project 7 155698322 155701743 - MGP_NODShiLtJ_P0086946 Nkx6-2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086947.1 MGP_NODShiLtJ_G0032958.1 mouse_genomes_project 7 155700165 155701736 - MGP_NODShiLtJ_P0086947 Nkx6-2 protein_coding protein_coding MGP_NODShiLtJ_T0015769.1 MGP_NODShiLtJ_G0013877.1 mouse_genomes_project 7 116279468 116279732 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0084495.1 MGP_NODShiLtJ_G0032273.1 mouse_genomes_project 7 92803927 92987267 - MGP_NODShiLtJ_P0084495 Arnt2 protein_coding protein_coding MGP_NODShiLtJ_T0015565.1 MGP_NODShiLtJ_G0013673.1 mouse_genomes_project 7 2840437 2840779 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085462.1 MGP_NODShiLtJ_G0032655.1 mouse_genomes_project 7 123392476 123408849 - MGP_NODShiLtJ_P0085462 Tmem9b protein_coding protein_coding MGP_NODShiLtJ_T0085463.1 MGP_NODShiLtJ_G0032655.1 mouse_genomes_project 7 123401981 123408917 - MGP_NODShiLtJ_P0085463 Tmem9b protein_coding protein_coding MGP_NODShiLtJ_T0081993.1 MGP_NODShiLtJ_G0031689.1 mouse_genomes_project 7 25610744 25616565 + MGP_NODShiLtJ_P0081993 B9d2 protein_coding protein_coding MGP_NODShiLtJ_T0081994.1 MGP_NODShiLtJ_G0031689.1 mouse_genomes_project 7 25610802 25613609 + MGP_NODShiLtJ_P0081994 B9d2 protein_coding protein_coding MGP_NODShiLtJ_T0081995.1 MGP_NODShiLtJ_G0031689.1 mouse_genomes_project 7 25610820 25613380 + MGP_NODShiLtJ_P0081995 B9d2 protein_coding protein_coding MGP_NODShiLtJ_T0081996.1 MGP_NODShiLtJ_G0031689.1 mouse_genomes_project 7 25611122 25616565 + MGP_NODShiLtJ_P0081996 B9d2 protein_coding protein_coding MGP_NODShiLtJ_T0008763.1 MGP_NODShiLtJ_G0007075.1 mouse_genomes_project 7 38485133 38493753 - Gm28078 lincRNA lincRNA MGP_NODShiLtJ_T0084504.1 MGP_NODShiLtJ_G0032278.1 mouse_genomes_project 7 93559665 93594495 - MGP_NODShiLtJ_P0084504 Vmn2r65 protein_coding protein_coding MGP_NODShiLtJ_T0008755.1 MGP_NODShiLtJ_G0007067.1 mouse_genomes_project 7 35841693 35851415 - Gm12756 lincRNA lincRNA MGP_NODShiLtJ_T0099497.1 MGP_NODShiLtJ_G0037891.1 mouse_genomes_project 7 85863163 85863344 - Gm23239 snRNA snRNA MGP_NODShiLtJ_T0100728.1 MGP_NODShiLtJ_G0039122.1 mouse_genomes_project 7 14761975 14762084 - Snord23 snoRNA snoRNA MGP_NODShiLtJ_T0080905.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1014619 1081426 - MGP_NODShiLtJ_P0080905 Lair1 protein_coding protein_coding MGP_NODShiLtJ_T0080906.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1018601 1081451 - MGP_NODShiLtJ_P0080906 Lair1 protein_coding protein_coding MGP_NODShiLtJ_T0080907.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1019587 1081421 - MGP_NODShiLtJ_P0080907 Lair1 protein_coding protein_coding MGP_NODShiLtJ_T0080908.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1020508 1081408 - MGP_NODShiLtJ_P0080908 Lair1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080909.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1020535 1081386 - MGP_NODShiLtJ_P0080909 Lair1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080910.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1020695 1041125 - Lair1 protein_coding processed_transcript MGP_NODShiLtJ_T0080911.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1021101 1081363 - MGP_NODShiLtJ_P0080911 Lair1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080912.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1021191 1081388 - MGP_NODShiLtJ_P0080912 Lair1 protein_coding protein_coding MGP_NODShiLtJ_T0080913.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1021191 1081388 - MGP_NODShiLtJ_P0080913 Lair1 protein_coding protein_coding MGP_NODShiLtJ_T0080914.1 MGP_NODShiLtJ_G0031347.1 mouse_genomes_project 7 1041279 1081395 - Lair1 protein_coding processed_transcript MGP_NODShiLtJ_T0086740.1 MGP_NODShiLtJ_G0032904.1 mouse_genomes_project 7 146736094 146746482 - MGP_NODShiLtJ_P0086740 4933402N03Rik protein_coding protein_coding MGP_NODShiLtJ_T0086917.1 MGP_NODShiLtJ_G0032952.1 mouse_genomes_project 7 155031035 155135316 + MGP_NODShiLtJ_P0086917 Jakmip3 protein_coding protein_coding MGP_NODShiLtJ_T0086918.1 MGP_NODShiLtJ_G0032952.1 mouse_genomes_project 7 155031055 155135310 + MGP_NODShiLtJ_P0086918 Jakmip3 protein_coding protein_coding MGP_NODShiLtJ_T0086919.1 MGP_NODShiLtJ_G0032952.1 mouse_genomes_project 7 155071718 155154371 + MGP_NODShiLtJ_P0086919 Jakmip3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0086920.1 MGP_NODShiLtJ_G0032952.1 mouse_genomes_project 7 155152679 155171924 + MGP_NODShiLtJ_P0086920 Jakmip3 protein_coding protein_coding MGP_NODShiLtJ_T0083115.1 MGP_NODShiLtJ_G0031952.1 mouse_genomes_project 7 46173679 46189607 + MGP_NODShiLtJ_P0083115 Zfp658 protein_coding protein_coding MGP_NODShiLtJ_T0083116.1 MGP_NODShiLtJ_G0031952.1 mouse_genomes_project 7 46176207 46189112 + MGP_NODShiLtJ_P0083116 Zfp658 protein_coding protein_coding MGP_NODShiLtJ_T0015633.1 MGP_NODShiLtJ_G0013741.1 mouse_genomes_project 7 33837877 33838832 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083909.1 MGP_NODShiLtJ_G0032158.1 mouse_genomes_project 7 71324928 71330870 - MGP_NODShiLtJ_P0083909 Ndnl2 protein_coding protein_coding MGP_NODShiLtJ_T0084929.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113357972 113424684 + MGP_NODShiLtJ_P0084929 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084930.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113373765 113385191 + MGP_NODShiLtJ_P0084930 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084931.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113373980 113385065 + MGP_NODShiLtJ_P0084931 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084932.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113374506 113385200 + MGP_NODShiLtJ_P0084932 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084933.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113385028 113425251 + MGP_NODShiLtJ_P0084933 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084934.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113390418 113398613 + MGP_NODShiLtJ_P0084934 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084935.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113394912 113397679 + Arap1 protein_coding processed_transcript MGP_NODShiLtJ_T0084936.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113396105 113398283 + MGP_NODShiLtJ_P0084936 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084937.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113397482 113398531 + MGP_NODShiLtJ_P0084937 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084938.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113397487 113398923 + MGP_NODShiLtJ_P0084938 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084939.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113406432 113425950 + MGP_NODShiLtJ_P0084939 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084940.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113406452 113425950 + MGP_NODShiLtJ_P0084940 Arap1 protein_coding protein_coding MGP_NODShiLtJ_T0084941.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113406719 113408196 + Arap1 protein_coding retained_intron MGP_NODShiLtJ_T0084942.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113407913 113410423 + Arap1 protein_coding processed_transcript MGP_NODShiLtJ_T0084943.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113410408 113411612 + Arap1 protein_coding processed_transcript MGP_NODShiLtJ_T0084944.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113414844 113422381 + Arap1 protein_coding retained_intron MGP_NODShiLtJ_T0084945.1 MGP_NODShiLtJ_G0032392.1 mouse_genomes_project 7 113420949 113425042 + Arap1 protein_coding retained_intron MGP_NODShiLtJ_T0084415.1 MGP_NODShiLtJ_G0032250.1 mouse_genomes_project 7 89911363 90033307 - MGP_NODShiLtJ_P0084415 Homer2 protein_coding protein_coding MGP_NODShiLtJ_T0084416.1 MGP_NODShiLtJ_G0032250.1 mouse_genomes_project 7 89911363 90019246 - MGP_NODShiLtJ_P0084416 Homer2 protein_coding protein_coding MGP_NODShiLtJ_T0084417.1 MGP_NODShiLtJ_G0032250.1 mouse_genomes_project 7 89922685 90033145 - MGP_NODShiLtJ_P0084417 Homer2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087508.1 MGP_NODShiLtJ_G0033093.1 mouse_genomes_project 7 161037677 161076535 - MGP_NODShiLtJ_P0087508 Cttn protein_coding protein_coding MGP_NODShiLtJ_T0087509.1 MGP_NODShiLtJ_G0033093.1 mouse_genomes_project 7 161037679 161076799 - MGP_NODShiLtJ_P0087509 Cttn protein_coding protein_coding MGP_NODShiLtJ_T0087510.1 MGP_NODShiLtJ_G0033093.1 mouse_genomes_project 7 161040634 161042079 - Cttn protein_coding retained_intron MGP_NODShiLtJ_T0087511.1 MGP_NODShiLtJ_G0033093.1 mouse_genomes_project 7 161042536 161053525 - Cttn protein_coding retained_intron MGP_NODShiLtJ_T0087512.1 MGP_NODShiLtJ_G0033093.1 mouse_genomes_project 7 161043765 161049656 - Cttn protein_coding processed_transcript MGP_NODShiLtJ_T0087513.1 MGP_NODShiLtJ_G0033093.1 mouse_genomes_project 7 161049553 161057719 - Cttn protein_coding processed_transcript MGP_NODShiLtJ_T0087514.1 MGP_NODShiLtJ_G0033093.1 mouse_genomes_project 7 161061595 161065905 - Cttn protein_coding processed_transcript MGP_NODShiLtJ_T0098077.1 MGP_NODShiLtJ_G0036489.1 mouse_genomes_project 7 30215481 30215597 - n-R5s153 rRNA rRNA MGP_NODShiLtJ_T0002247.1 MGP_NODShiLtJ_G0002158.1 mouse_genomes_project 7 136998582 136999598 - TEC TEC MGP_NODShiLtJ_T0086575.1 MGP_NODShiLtJ_G0032876.1 mouse_genomes_project 7 143284521 143288681 - MGP_NODShiLtJ_P0086575 Pycard protein_coding protein_coding MGP_NODShiLtJ_T0086576.1 MGP_NODShiLtJ_G0032876.1 mouse_genomes_project 7 143286453 143288341 - MGP_NODShiLtJ_P0086576 Pycard protein_coding protein_coding MGP_NODShiLtJ_T0015631.1 MGP_NODShiLtJ_G0013739.1 mouse_genomes_project 7 33837874 33838836 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085074.1 MGP_NODShiLtJ_G0032419.1 mouse_genomes_project 7 114596586 114600917 - MGP_NODShiLtJ_P0085074 protein_coding protein_coding MGP_NODShiLtJ_T0015775.1 MGP_NODShiLtJ_G0013883.1 mouse_genomes_project 7 124140794 124141360 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0008724.1 MGP_NODShiLtJ_G0007040.1 mouse_genomes_project 7 11179978 11199584 - 1810019N24Rik lincRNA lincRNA MGP_NODShiLtJ_T0008725.1 MGP_NODShiLtJ_G0007040.1 mouse_genomes_project 7 11181076 11181453 - 1810019N24Rik lincRNA lincRNA MGP_NODShiLtJ_T0010808.1 MGP_NODShiLtJ_G0008941.1 mouse_genomes_project 7 124587942 124588049 + miRNA miRNA MGP_NODShiLtJ_T0101400.1 MGP_NODShiLtJ_G0039606.1 mouse_genomes_project 7 46573419 46577912 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101401.1 MGP_NODShiLtJ_G0039606.1 mouse_genomes_project 7 46575222 46579039 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0102188.1 MGP_NODShiLtJ_G0040354.1 mouse_genomes_project 7 96077040 96077966 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081859.1 MGP_NODShiLtJ_G0031661.1 mouse_genomes_project 7 24704801 24709609 + MGP_NODShiLtJ_P0081859 Cd79a protein_coding protein_coding MGP_NODShiLtJ_T0085092.1 MGP_NODShiLtJ_G0032436.1 mouse_genomes_project 7 114923013 114946757 - MGP_NODShiLtJ_P0085092 Olfr78 protein_coding protein_coding MGP_NODShiLtJ_T0085093.1 MGP_NODShiLtJ_G0032436.1 mouse_genomes_project 7 114923013 114946757 - MGP_NODShiLtJ_P0085093 Olfr78 protein_coding protein_coding MGP_NODShiLtJ_T0010732.1 MGP_NODShiLtJ_G0008865.1 mouse_genomes_project 7 8870506 8870576 - Gm23087 miRNA miRNA MGP_NODShiLtJ_T0083572.1 MGP_NODShiLtJ_G0032070.1 mouse_genomes_project 7 48769089 48780537 - Syngr4 protein_coding processed_transcript MGP_NODShiLtJ_T0083573.1 MGP_NODShiLtJ_G0032070.1 mouse_genomes_project 7 48770762 48779621 - MGP_NODShiLtJ_P0083573 Syngr4 protein_coding protein_coding MGP_NODShiLtJ_T0015636.1 MGP_NODShiLtJ_G0013744.1 mouse_genomes_project 7 34435573 34436032 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086435.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142822875 142828706 + Phkg2 protein_coding retained_intron MGP_NODShiLtJ_T0086436.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142822915 142832516 + MGP_NODShiLtJ_P0086436 Phkg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086437.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142822937 142832516 + MGP_NODShiLtJ_P0086437 Phkg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086438.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142822939 142829355 + Phkg2 protein_coding retained_intron MGP_NODShiLtJ_T0086439.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142822939 142833376 + MGP_NODShiLtJ_P0086439 Phkg2 protein_coding protein_coding MGP_NODShiLtJ_T0086440.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142823064 142833374 + MGP_NODShiLtJ_P0086440 Phkg2 protein_coding protein_coding MGP_NODShiLtJ_T0086441.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142823118 142833374 + MGP_NODShiLtJ_P0086441 Phkg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086442.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142823177 142832467 + Phkg2 protein_coding retained_intron MGP_NODShiLtJ_T0086443.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142828059 142833369 + MGP_NODShiLtJ_P0086443 Phkg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086444.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142829348 142832488 + Phkg2 protein_coding retained_intron MGP_NODShiLtJ_T0086445.1 MGP_NODShiLtJ_G0032852.1 mouse_genomes_project 7 142832164 142832755 + Phkg2 protein_coding retained_intron MGP_NODShiLtJ_T0083931.1 MGP_NODShiLtJ_G0032162.1 mouse_genomes_project 7 72406697 72502962 + MGP_NODShiLtJ_P0083931 Pcsk6 protein_coding protein_coding MGP_NODShiLtJ_T0083932.1 MGP_NODShiLtJ_G0032162.1 mouse_genomes_project 7 72406992 72603789 + MGP_NODShiLtJ_P0083932 Pcsk6 protein_coding protein_coding MGP_NODShiLtJ_T0083933.1 MGP_NODShiLtJ_G0032162.1 mouse_genomes_project 7 72407099 72603737 + MGP_NODShiLtJ_P0083933 Pcsk6 protein_coding protein_coding MGP_NODShiLtJ_T0083934.1 MGP_NODShiLtJ_G0032162.1 mouse_genomes_project 7 72407395 72603743 + MGP_NODShiLtJ_P0083934 Pcsk6 protein_coding protein_coding MGP_NODShiLtJ_T0083935.1 MGP_NODShiLtJ_G0032162.1 mouse_genomes_project 7 72502989 72513172 + Pcsk6 protein_coding retained_intron MGP_NODShiLtJ_T0083936.1 MGP_NODShiLtJ_G0032162.1 mouse_genomes_project 7 72590319 72596931 + Pcsk6 protein_coding retained_intron MGP_NODShiLtJ_T0010824.1 MGP_NODShiLtJ_G0008957.1 mouse_genomes_project 7 155920334 155920441 + Mir6401 miRNA miRNA MGP_NODShiLtJ_T0099500.1 MGP_NODShiLtJ_G0037894.1 mouse_genomes_project 7 98142500 98142564 - Gm24249 snRNA snRNA MGP_NODShiLtJ_T0005145.1 MGP_NODShiLtJ_G0004376.1 mouse_genomes_project 7 36823802 36825362 + B230322F03Rik antisense antisense MGP_NODShiLtJ_T0086222.1 MGP_NODShiLtJ_G0032809.1 mouse_genomes_project 7 141958264 141992500 + MGP_NODShiLtJ_P0086222 Fam57b protein_coding protein_coding MGP_NODShiLtJ_T0086223.1 MGP_NODShiLtJ_G0032809.1 mouse_genomes_project 7 141974313 141983508 + Fam57b protein_coding processed_transcript MGP_NODShiLtJ_T0086224.1 MGP_NODShiLtJ_G0032809.1 mouse_genomes_project 7 141975666 141978848 + Fam57b protein_coding processed_transcript MGP_NODShiLtJ_T0086225.1 MGP_NODShiLtJ_G0032809.1 mouse_genomes_project 7 141978502 141989812 + MGP_NODShiLtJ_P0086225 Fam57b protein_coding protein_coding MGP_NODShiLtJ_T0086226.1 MGP_NODShiLtJ_G0032809.1 mouse_genomes_project 7 141978503 141992504 + MGP_NODShiLtJ_P0086226 Fam57b protein_coding protein_coding MGP_NODShiLtJ_T0086227.1 MGP_NODShiLtJ_G0032809.1 mouse_genomes_project 7 141986367 141992502 + MGP_NODShiLtJ_P0086227 Fam57b protein_coding protein_coding MGP_NODShiLtJ_T0100757.1 MGP_NODShiLtJ_G0039151.1 mouse_genomes_project 7 76940895 76941024 - Gm24120 snoRNA snoRNA MGP_NODShiLtJ_T0086673.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145041579 145086189 + MGP_NODShiLtJ_P0086673 Wdr11 protein_coding protein_coding MGP_NODShiLtJ_T0086674.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145041624 145076091 + Wdr11 protein_coding retained_intron MGP_NODShiLtJ_T0086675.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145041634 145062753 + Wdr11 protein_coding retained_intron MGP_NODShiLtJ_T0086676.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145042784 145083306 + MGP_NODShiLtJ_P0086676 Wdr11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0086677.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145055528 145058259 + Wdr11 protein_coding processed_transcript MGP_NODShiLtJ_T0086678.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145057019 145086187 + Wdr11 protein_coding retained_intron MGP_NODShiLtJ_T0086679.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145058257 145064503 + MGP_NODShiLtJ_P0086679 Wdr11 protein_coding protein_coding MGP_NODShiLtJ_T0086680.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145075506 145086185 + Wdr11 protein_coding retained_intron MGP_NODShiLtJ_T0086681.1 MGP_NODShiLtJ_G0032896.1 mouse_genomes_project 7 145079483 145084122 + MGP_NODShiLtJ_P0086681 Wdr11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002161.1 MGP_NODShiLtJ_G0002073.1 mouse_genomes_project 7 36517545 36518300 + TEC TEC MGP_NODShiLtJ_T0082149.1 MGP_NODShiLtJ_G0031731.1 mouse_genomes_project 7 27847648 27883531 + MGP_NODShiLtJ_P0082149 2310022A10Rik protein_coding protein_coding MGP_NODShiLtJ_T0082150.1 MGP_NODShiLtJ_G0031731.1 mouse_genomes_project 7 27847682 27876150 + MGP_NODShiLtJ_P0082150 2310022A10Rik protein_coding protein_coding MGP_NODShiLtJ_T0082151.1 MGP_NODShiLtJ_G0031731.1 mouse_genomes_project 7 27847685 27848487 + 2310022A10Rik protein_coding processed_transcript MGP_NODShiLtJ_T0082152.1 MGP_NODShiLtJ_G0031731.1 mouse_genomes_project 7 27847701 27883531 + MGP_NODShiLtJ_P0082152 2310022A10Rik protein_coding protein_coding MGP_NODShiLtJ_T0082153.1 MGP_NODShiLtJ_G0031731.1 mouse_genomes_project 7 27855506 27883526 + MGP_NODShiLtJ_P0082153 2310022A10Rik protein_coding protein_coding MGP_NODShiLtJ_T0082154.1 MGP_NODShiLtJ_G0031731.1 mouse_genomes_project 7 27855527 27867536 + 2310022A10Rik protein_coding retained_intron MGP_NODShiLtJ_T0082155.1 MGP_NODShiLtJ_G0031731.1 mouse_genomes_project 7 27861373 27882066 + MGP_NODShiLtJ_P0082155 2310022A10Rik protein_coding protein_coding MGP_NODShiLtJ_T0082156.1 MGP_NODShiLtJ_G0031731.1 mouse_genomes_project 7 27875898 27881852 + 2310022A10Rik protein_coding processed_transcript MGP_NODShiLtJ_T0082045.1 MGP_NODShiLtJ_G0031703.1 mouse_genomes_project 7 26875920 26892056 + MGP_NODShiLtJ_P0082045 Cyp2b19 protein_coding protein_coding MGP_NODShiLtJ_T0082046.1 MGP_NODShiLtJ_G0031703.1 mouse_genomes_project 7 26875941 26885055 + Cyp2b19 protein_coding retained_intron MGP_NODShiLtJ_T0082047.1 MGP_NODShiLtJ_G0031703.1 mouse_genomes_project 7 26885975 26890817 + Cyp2b19 protein_coding retained_intron MGP_NODShiLtJ_T0102147.1 MGP_NODShiLtJ_G0040313.1 mouse_genomes_project 7 50710708 51741068 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0086870.1 MGP_NODShiLtJ_G0032935.1 mouse_genomes_project 7 150076629 150184540 - MGP_NODShiLtJ_P0086870 D7Ertd443e protein_coding protein_coding MGP_NODShiLtJ_T0086871.1 MGP_NODShiLtJ_G0032935.1 mouse_genomes_project 7 150076642 150159145 - MGP_NODShiLtJ_P0086871 D7Ertd443e protein_coding protein_coding MGP_NODShiLtJ_T0086872.1 MGP_NODShiLtJ_G0032935.1 mouse_genomes_project 7 150076980 150176867 - MGP_NODShiLtJ_P0086872 D7Ertd443e protein_coding protein_coding MGP_NODShiLtJ_T0086873.1 MGP_NODShiLtJ_G0032935.1 mouse_genomes_project 7 150077181 150079208 - D7Ertd443e protein_coding retained_intron MGP_NODShiLtJ_T0086874.1 MGP_NODShiLtJ_G0032935.1 mouse_genomes_project 7 150077181 150166075 - MGP_NODShiLtJ_P0086874 D7Ertd443e protein_coding protein_coding MGP_NODShiLtJ_T0086875.1 MGP_NODShiLtJ_G0032935.1 mouse_genomes_project 7 150166711 150196645 - MGP_NODShiLtJ_P0086875 D7Ertd443e protein_coding protein_coding MGP_NODShiLtJ_T0086876.1 MGP_NODShiLtJ_G0032935.1 mouse_genomes_project 7 150166832 150196639 - MGP_NODShiLtJ_P0086876 D7Ertd443e protein_coding protein_coding MGP_NODShiLtJ_T0086877.1 MGP_NODShiLtJ_G0032935.1 mouse_genomes_project 7 150172841 150205517 - D7Ertd443e protein_coding processed_transcript MGP_NODShiLtJ_T0081969.1 MGP_NODShiLtJ_G0031684.1 mouse_genomes_project 7 25541814 25547949 + MGP_NODShiLtJ_P0081969 Atp5sl protein_coding protein_coding MGP_NODShiLtJ_T0081970.1 MGP_NODShiLtJ_G0031684.1 mouse_genomes_project 7 25541824 25542938 + Atp5sl protein_coding retained_intron MGP_NODShiLtJ_T0081971.1 MGP_NODShiLtJ_G0031684.1 mouse_genomes_project 7 25541893 25547946 + MGP_NODShiLtJ_P0081971 Atp5sl protein_coding protein_coding MGP_NODShiLtJ_T0081972.1 MGP_NODShiLtJ_G0031684.1 mouse_genomes_project 7 25542935 25544803 + Atp5sl protein_coding retained_intron MGP_NODShiLtJ_T0081973.1 MGP_NODShiLtJ_G0031684.1 mouse_genomes_project 7 25543293 25546480 + MGP_NODShiLtJ_P0081973 Atp5sl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081974.1 MGP_NODShiLtJ_G0031684.1 mouse_genomes_project 7 25543300 25544400 + Atp5sl protein_coding processed_transcript MGP_NODShiLtJ_T0005137.1 MGP_NODShiLtJ_G0004369.1 mouse_genomes_project 7 31903862 31913057 + antisense antisense MGP_NODShiLtJ_T0098211.1 MGP_NODShiLtJ_G0036623.1 mouse_genomes_project 7 89833025 89833152 + Mir1839 scaRNA scaRNA MGP_NODShiLtJ_T0081734.1 MGP_NODShiLtJ_G0031620.1 mouse_genomes_project 7 23325209 23325898 + MGP_NODShiLtJ_P0081734 Vmn1r174 protein_coding protein_coding MGP_NODShiLtJ_T0086326.1 MGP_NODShiLtJ_G0032827.1 mouse_genomes_project 7 142223599 142226119 - MGP_NODShiLtJ_P0086326 Zg16 protein_coding protein_coding MGP_NODShiLtJ_T0086327.1 MGP_NODShiLtJ_G0032827.1 mouse_genomes_project 7 142223599 142225421 - MGP_NODShiLtJ_P0086327 Zg16 protein_coding protein_coding MGP_NODShiLtJ_T0086328.1 MGP_NODShiLtJ_G0032827.1 mouse_genomes_project 7 142223919 142263674 - MGP_NODShiLtJ_P0086328 Zg16 protein_coding protein_coding MGP_NODShiLtJ_T0086329.1 MGP_NODShiLtJ_G0032827.1 mouse_genomes_project 7 142240036 142263632 - Zg16 protein_coding processed_transcript MGP_NODShiLtJ_T0015556.1 MGP_NODShiLtJ_G0013664.1 mouse_genomes_project 7 1216039 1216912 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085416.1 MGP_NODShiLtJ_G0032636.1 mouse_genomes_project 7 122291723 122292779 + MGP_NODShiLtJ_P0085416 protein_coding protein_coding MGP_NODShiLtJ_T0010754.1 MGP_NODShiLtJ_G0008887.1 mouse_genomes_project 7 31251366 31251424 + Mir3569 miRNA miRNA MGP_NODShiLtJ_T0005087.1 MGP_NODShiLtJ_G0004335.1 mouse_genomes_project 7 1526296 1551294 - Gm15494 antisense antisense MGP_NODShiLtJ_T0005088.1 MGP_NODShiLtJ_G0004335.1 mouse_genomes_project 7 1528304 1551330 - Gm15494 antisense antisense MGP_NODShiLtJ_T0087491.1 MGP_NODShiLtJ_G0033090.1 mouse_genomes_project 7 160405611 160423254 + MGP_NODShiLtJ_P0087491 Dhcr7 protein_coding protein_coding MGP_NODShiLtJ_T0087492.1 MGP_NODShiLtJ_G0033090.1 mouse_genomes_project 7 160405799 160425623 + MGP_NODShiLtJ_P0087492 Dhcr7 protein_coding protein_coding MGP_NODShiLtJ_T0087493.1 MGP_NODShiLtJ_G0033090.1 mouse_genomes_project 7 160405956 160421306 + MGP_NODShiLtJ_P0087493 Dhcr7 protein_coding protein_coding MGP_NODShiLtJ_T0087494.1 MGP_NODShiLtJ_G0033090.1 mouse_genomes_project 7 160405960 160418883 + MGP_NODShiLtJ_P0087494 Dhcr7 protein_coding protein_coding MGP_NODShiLtJ_T0087495.1 MGP_NODShiLtJ_G0033090.1 mouse_genomes_project 7 160405980 160413625 + Dhcr7 protein_coding processed_transcript MGP_NODShiLtJ_T0087496.1 MGP_NODShiLtJ_G0033090.1 mouse_genomes_project 7 160416665 160419036 + Dhcr7 protein_coding processed_transcript MGP_NODShiLtJ_T0087497.1 MGP_NODShiLtJ_G0033090.1 mouse_genomes_project 7 160417070 160423146 + Dhcr7 protein_coding processed_transcript MGP_NODShiLtJ_T0082052.1 MGP_NODShiLtJ_G0031707.1 mouse_genomes_project 7 27219159 27225977 + Cyp2a22 protein_coding retained_intron MGP_NODShiLtJ_T0082053.1 MGP_NODShiLtJ_G0031707.1 mouse_genomes_project 7 27219163 27225553 + MGP_NODShiLtJ_P0082053 Cyp2a22 protein_coding protein_coding MGP_NODShiLtJ_T0008853.1 MGP_NODShiLtJ_G0007142.1 mouse_genomes_project 7 86896722 86896999 + 1700011D18Rik lincRNA lincRNA MGP_NODShiLtJ_T0002241.1 MGP_NODShiLtJ_G0002152.1 mouse_genomes_project 7 112369974 112371771 + TEC TEC MGP_NODShiLtJ_T0083574.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48780777 48802218 + MGP_NODShiLtJ_P0083574 Tmem143 protein_coding protein_coding MGP_NODShiLtJ_T0083575.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48780917 48802218 + MGP_NODShiLtJ_P0083575 Tmem143 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083576.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48780937 48802214 + MGP_NODShiLtJ_P0083576 Tmem143 protein_coding protein_coding MGP_NODShiLtJ_T0083577.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48781256 48786011 + Tmem143 protein_coding retained_intron MGP_NODShiLtJ_T0083578.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48781259 48792996 + Tmem143 protein_coding processed_transcript MGP_NODShiLtJ_T0083579.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48781265 48792243 + Tmem143 protein_coding retained_intron MGP_NODShiLtJ_T0083580.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48781265 48794303 + MGP_NODShiLtJ_P0083580 Tmem143 protein_coding protein_coding MGP_NODShiLtJ_T0083581.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48793640 48794245 + Tmem143 protein_coding processed_transcript MGP_NODShiLtJ_T0083582.1 MGP_NODShiLtJ_G0032071.1 mouse_genomes_project 7 48800783 48801761 + Tmem143 protein_coding processed_transcript MGP_NODShiLtJ_T0085371.1 MGP_NODShiLtJ_G0032598.1 mouse_genomes_project 7 120397431 120398563 - MGP_NODShiLtJ_P0085371 protein_coding protein_coding MGP_NODShiLtJ_T0010809.1 MGP_NODShiLtJ_G0008942.1 mouse_genomes_project 7 126621520 126621649 + Gm44462 miRNA miRNA MGP_NODShiLtJ_T0085036.1 MGP_NODShiLtJ_G0032410.1 mouse_genomes_project 7 114183512 114189530 - MGP_NODShiLtJ_P0085036 Art5 protein_coding protein_coding MGP_NODShiLtJ_T0085037.1 MGP_NODShiLtJ_G0032410.1 mouse_genomes_project 7 114183513 114186863 - MGP_NODShiLtJ_P0085037 Art5 protein_coding protein_coding MGP_NODShiLtJ_T0085038.1 MGP_NODShiLtJ_G0032410.1 mouse_genomes_project 7 114183747 114186573 - MGP_NODShiLtJ_P0085038 Art5 protein_coding protein_coding MGP_NODShiLtJ_T0085039.1 MGP_NODShiLtJ_G0032410.1 mouse_genomes_project 7 114183747 114186127 - MGP_NODShiLtJ_P0085039 Art5 protein_coding protein_coding MGP_NODShiLtJ_T0100765.1 MGP_NODShiLtJ_G0039159.1 mouse_genomes_project 7 111478115 111478246 - Gm25409 snoRNA snoRNA MGP_NODShiLtJ_T0086068.1 MGP_NODShiLtJ_G0032786.1 mouse_genomes_project 7 141532908 141539298 - Cd19 protein_coding retained_intron MGP_NODShiLtJ_T0086069.1 MGP_NODShiLtJ_G0032786.1 mouse_genomes_project 7 141532909 141539319 - MGP_NODShiLtJ_P0086069 Cd19 protein_coding protein_coding MGP_NODShiLtJ_T0086070.1 MGP_NODShiLtJ_G0032786.1 mouse_genomes_project 7 141532909 141539302 - MGP_NODShiLtJ_P0086070 Cd19 protein_coding protein_coding MGP_NODShiLtJ_T0086071.1 MGP_NODShiLtJ_G0032786.1 mouse_genomes_project 7 141533823 141534258 - Cd19 protein_coding retained_intron MGP_NODShiLtJ_T0086072.1 MGP_NODShiLtJ_G0032786.1 mouse_genomes_project 7 141538095 141538984 - Cd19 protein_coding retained_intron MGP_NODShiLtJ_T0085234.1 MGP_NODShiLtJ_G0032550.1 mouse_genomes_project 7 118190276 118259247 + MGP_NODShiLtJ_P0085234 protein_coding protein_coding MGP_NODShiLtJ_T0008852.1 MGP_NODShiLtJ_G0007141.1 mouse_genomes_project 7 86867889 86870268 + 5330411O13Rik lincRNA lincRNA MGP_NODShiLtJ_T0084922.1 MGP_NODShiLtJ_G0032391.1 mouse_genomes_project 7 113321311 113353724 + MGP_NODShiLtJ_P0084922 Stard10 protein_coding protein_coding MGP_NODShiLtJ_T0084923.1 MGP_NODShiLtJ_G0032391.1 mouse_genomes_project 7 113325412 113353235 + MGP_NODShiLtJ_P0084923 Stard10 protein_coding protein_coding MGP_NODShiLtJ_T0084924.1 MGP_NODShiLtJ_G0032391.1 mouse_genomes_project 7 113325681 113350385 + MGP_NODShiLtJ_P0084924 Stard10 protein_coding protein_coding MGP_NODShiLtJ_T0084925.1 MGP_NODShiLtJ_G0032391.1 mouse_genomes_project 7 113325906 113353287 + MGP_NODShiLtJ_P0084925 Stard10 protein_coding protein_coding MGP_NODShiLtJ_T0084926.1 MGP_NODShiLtJ_G0032391.1 mouse_genomes_project 7 113325978 113353406 + MGP_NODShiLtJ_P0084926 Stard10 protein_coding protein_coding MGP_NODShiLtJ_T0084927.1 MGP_NODShiLtJ_G0032391.1 mouse_genomes_project 7 113326163 113351430 + MGP_NODShiLtJ_P0084927 Stard10 protein_coding protein_coding MGP_NODShiLtJ_T0084928.1 MGP_NODShiLtJ_G0032391.1 mouse_genomes_project 7 113349607 113353235 + MGP_NODShiLtJ_P0084928 Stard10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087535.1 MGP_NODShiLtJ_G0033098.1 mouse_genomes_project 7 161481104 161484963 + MGP_NODShiLtJ_P0087535 Fgf4 protein_coding protein_coding MGP_NODShiLtJ_T0010811.1 MGP_NODShiLtJ_G0008944.1 mouse_genomes_project 7 129355384 129355464 + Gm27684 miRNA miRNA MGP_NODShiLtJ_T0083360.1 MGP_NODShiLtJ_G0032013.1 mouse_genomes_project 7 47827030 47835072 - MGP_NODShiLtJ_P0083360 Prrg2 protein_coding protein_coding MGP_NODShiLtJ_T0081203.1 MGP_NODShiLtJ_G0031447.1 mouse_genomes_project 7 10339075 10340002 + MGP_NODShiLtJ_P0081203 Vmn1r80 protein_coding protein_coding MGP_NODShiLtJ_T0081168.1 MGP_NODShiLtJ_G0031424.1 mouse_genomes_project 7 4103039 4129051 - MGP_NODShiLtJ_P0081168 Zim1 protein_coding protein_coding MGP_NODShiLtJ_T0081169.1 MGP_NODShiLtJ_G0031424.1 mouse_genomes_project 7 4107540 4129030 - MGP_NODShiLtJ_P0081169 Zim1 protein_coding protein_coding MGP_NODShiLtJ_T0081170.1 MGP_NODShiLtJ_G0031424.1 mouse_genomes_project 7 4108456 4120200 - MGP_NODShiLtJ_P0081170 Zim1 protein_coding protein_coding MGP_NODShiLtJ_T0085370.1 MGP_NODShiLtJ_G0032597.1 mouse_genomes_project 7 120388743 120389691 + MGP_NODShiLtJ_P0085370 Olfr17 protein_coding protein_coding MGP_NODShiLtJ_T0008770.1 MGP_NODShiLtJ_G0007082.1 mouse_genomes_project 7 41203160 41212160 + Gm37494 lincRNA lincRNA MGP_NODShiLtJ_T0008771.1 MGP_NODShiLtJ_G0007082.1 mouse_genomes_project 7 41211338 41212560 + Gm37494 lincRNA lincRNA MGP_NODShiLtJ_T0008772.1 MGP_NODShiLtJ_G0007082.1 mouse_genomes_project 7 41211339 41246375 + Gm37494 lincRNA lincRNA MGP_NODShiLtJ_T0008773.1 MGP_NODShiLtJ_G0007082.1 mouse_genomes_project 7 41211363 41223916 + Gm37494 lincRNA lincRNA MGP_NODShiLtJ_T0015561.1 MGP_NODShiLtJ_G0013669.1 mouse_genomes_project 7 1489486 1489949 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0085230.1 MGP_NODShiLtJ_G0032546.1 mouse_genomes_project 7 118021917 118028374 - MGP_NODShiLtJ_P0085230 protein_coding protein_coding MGP_NODShiLtJ_T0083585.1 MGP_NODShiLtJ_G0032073.1 mouse_genomes_project 7 48808876 48817395 + MGP_NODShiLtJ_P0083585 Ccdc114 protein_coding protein_coding MGP_NODShiLtJ_T0083586.1 MGP_NODShiLtJ_G0032073.1 mouse_genomes_project 7 48809020 48809872 + Ccdc114 protein_coding retained_intron MGP_NODShiLtJ_T0083587.1 MGP_NODShiLtJ_G0032073.1 mouse_genomes_project 7 48809047 48817401 + MGP_NODShiLtJ_P0083587 Ccdc114 protein_coding protein_coding MGP_NODShiLtJ_T0083588.1 MGP_NODShiLtJ_G0032073.1 mouse_genomes_project 7 48809047 48823028 + MGP_NODShiLtJ_P0083588 Ccdc114 protein_coding protein_coding MGP_NODShiLtJ_T0083589.1 MGP_NODShiLtJ_G0032073.1 mouse_genomes_project 7 48809324 48835608 + MGP_NODShiLtJ_P0083589 Ccdc114 protein_coding protein_coding MGP_NODShiLtJ_T0083696.1 MGP_NODShiLtJ_G0032110.1 mouse_genomes_project 7 52398924 52399933 - MGP_NODShiLtJ_P0083696 Mrgprb3 protein_coding protein_coding MGP_NODShiLtJ_T0087543.1 MGP_NODShiLtJ_G0033101.1 mouse_genomes_project 7 161553810 161563745 - MGP_NODShiLtJ_P0087543 Ccnd1 protein_coding protein_coding MGP_NODShiLtJ_T0087544.1 MGP_NODShiLtJ_G0033101.1 mouse_genomes_project 7 161561169 161562072 - Ccnd1 protein_coding retained_intron MGP_NODShiLtJ_T0084901.1 MGP_NODShiLtJ_G0032389.1 mouse_genomes_project 7 113071570 113285445 + MGP_NODShiLtJ_P0084901 Fchsd2 protein_coding protein_coding MGP_NODShiLtJ_T0084902.1 MGP_NODShiLtJ_G0032389.1 mouse_genomes_project 7 113071571 113181928 + Fchsd2 protein_coding processed_transcript MGP_NODShiLtJ_T0084903.1 MGP_NODShiLtJ_G0032389.1 mouse_genomes_project 7 113071576 113285468 + MGP_NODShiLtJ_P0084903 Fchsd2 protein_coding protein_coding MGP_NODShiLtJ_T0084904.1 MGP_NODShiLtJ_G0032389.1 mouse_genomes_project 7 113071600 113178270 + Fchsd2 protein_coding retained_intron MGP_NODShiLtJ_T0084905.1 MGP_NODShiLtJ_G0032389.1 mouse_genomes_project 7 113071675 113169078 + Fchsd2 protein_coding processed_transcript MGP_NODShiLtJ_T0084906.1 MGP_NODShiLtJ_G0032389.1 mouse_genomes_project 7 113071677 113107269 + Fchsd2 protein_coding retained_intron MGP_NODShiLtJ_T0084907.1 MGP_NODShiLtJ_G0032389.1 mouse_genomes_project 7 113237127 113246669 + Fchsd2 protein_coding retained_intron MGP_NODShiLtJ_T0085725.1 MGP_NODShiLtJ_G0032709.1 mouse_genomes_project 7 133079362 133167340 + MGP_NODShiLtJ_P0085725 Tmc5 protein_coding protein_coding MGP_NODShiLtJ_T0085726.1 MGP_NODShiLtJ_G0032709.1 mouse_genomes_project 7 133079362 133167341 + MGP_NODShiLtJ_P0085726 Tmc5 protein_coding protein_coding MGP_NODShiLtJ_T0085727.1 MGP_NODShiLtJ_G0032709.1 mouse_genomes_project 7 133083031 133167341 + MGP_NODShiLtJ_P0085727 Tmc5 protein_coding protein_coding MGP_NODShiLtJ_T0085728.1 MGP_NODShiLtJ_G0032709.1 mouse_genomes_project 7 133124309 133167341 + MGP_NODShiLtJ_P0085728 Tmc5 protein_coding protein_coding MGP_NODShiLtJ_T0082967.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 36970819 37039949 - MGP_NODShiLtJ_P0082967 Dpy19l3 protein_coding protein_coding MGP_NODShiLtJ_T0082968.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 36976385 36993695 - MGP_NODShiLtJ_P0082968 Dpy19l3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082969.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 36992826 36994168 - Dpy19l3 protein_coding retained_intron MGP_NODShiLtJ_T0082970.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 36993235 36994254 - Dpy19l3 protein_coding retained_intron MGP_NODShiLtJ_T0082971.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 36999790 37015227 - MGP_NODShiLtJ_P0082971 Dpy19l3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082972.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 37001599 37009159 - Dpy19l3 protein_coding retained_intron MGP_NODShiLtJ_T0082973.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 37005128 37010955 - Dpy19l3 protein_coding processed_transcript MGP_NODShiLtJ_T0082974.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 37010969 37015271 - Dpy19l3 protein_coding retained_intron MGP_NODShiLtJ_T0082975.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 37015172 37039894 - Dpy19l3 protein_coding processed_transcript MGP_NODShiLtJ_T0082976.1 MGP_NODShiLtJ_G0031912.1 mouse_genomes_project 7 37036795 37039850 - Dpy19l3 protein_coding retained_intron MGP_NODShiLtJ_T0008885.1 MGP_NODShiLtJ_G0007158.1 mouse_genomes_project 7 103748694 103858940 + Gm26862 lincRNA lincRNA MGP_NODShiLtJ_T0083272.1 MGP_NODShiLtJ_G0031989.1 mouse_genomes_project 7 47339152 47404313 - MGP_NODShiLtJ_P0083272 Myh14 protein_coding protein_coding MGP_NODShiLtJ_T0083273.1 MGP_NODShiLtJ_G0031989.1 mouse_genomes_project 7 47339152 47404313 - MGP_NODShiLtJ_P0083273 Myh14 protein_coding protein_coding MGP_NODShiLtJ_T0084512.1 MGP_NODShiLtJ_G0032285.1 mouse_genomes_project 7 95767185 95768187 - MGP_NODShiLtJ_P0084512 Olfr304 protein_coding protein_coding MGP_NODShiLtJ_T0082193.1 MGP_NODShiLtJ_G0031741.1 mouse_genomes_project 7 28338153 28361359 - MGP_NODShiLtJ_P0082193 Zfp780b protein_coding protein_coding MGP_NODShiLtJ_T0100734.1 MGP_NODShiLtJ_G0039128.1 mouse_genomes_project 7 46928976 46929066 + Snord88a snoRNA snoRNA MGP_NODShiLtJ_T0086332.1 MGP_NODShiLtJ_G0032829.1 mouse_genomes_project 7 142284657 142300652 - MGP_NODShiLtJ_P0086332 Qprt protein_coding protein_coding MGP_NODShiLtJ_T0086333.1 MGP_NODShiLtJ_G0032829.1 mouse_genomes_project 7 142286534 142300467 - Qprt protein_coding processed_transcript MGP_NODShiLtJ_T0086334.1 MGP_NODShiLtJ_G0032829.1 mouse_genomes_project 7 142294215 142300444 - Qprt protein_coding processed_transcript MGP_NODShiLtJ_T0083284.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47501169 47531384 + MGP_NODShiLtJ_P0083284 Vrk3 protein_coding protein_coding MGP_NODShiLtJ_T0083285.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47501241 47510862 + Vrk3 protein_coding retained_intron MGP_NODShiLtJ_T0083286.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47501340 47512526 + MGP_NODShiLtJ_P0083286 Vrk3 protein_coding protein_coding MGP_NODShiLtJ_T0083287.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47501392 47531384 + MGP_NODShiLtJ_P0083287 Vrk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083288.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47501402 47515812 + MGP_NODShiLtJ_P0083288 Vrk3 protein_coding protein_coding MGP_NODShiLtJ_T0083289.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47501403 47517560 + MGP_NODShiLtJ_P0083289 Vrk3 protein_coding protein_coding MGP_NODShiLtJ_T0083290.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47501699 47506713 + MGP_NODShiLtJ_P0083290 Vrk3 protein_coding protein_coding MGP_NODShiLtJ_T0083291.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47504869 47512164 + Vrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0083292.1 MGP_NODShiLtJ_G0031994.1 mouse_genomes_project 7 47504871 47512164 + Vrk3 protein_coding processed_transcript MGP_NODShiLtJ_T0085105.1 MGP_NODShiLtJ_G0032447.1 mouse_genomes_project 7 115171990 115172929 - MGP_NODShiLtJ_P0085105 Olfr577 protein_coding protein_coding MGP_NODShiLtJ_T0015707.1 MGP_NODShiLtJ_G0013815.1 mouse_genomes_project 7 67504024 67504483 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083683.1 MGP_NODShiLtJ_G0032101.1 mouse_genomes_project 7 50601923 50626274 - MGP_NODShiLtJ_P0083683 protein_coding protein_coding MGP_NODShiLtJ_T0080952.1 MGP_NODShiLtJ_G0031355.1 mouse_genomes_project 7 1502466 1526201 - MGP_NODShiLtJ_P0080952 Rdh13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0080953.1 MGP_NODShiLtJ_G0031355.1 mouse_genomes_project 7 1503363 1526249 - MGP_NODShiLtJ_P0080953 Rdh13 protein_coding protein_coding MGP_NODShiLtJ_T0080954.1 MGP_NODShiLtJ_G0031355.1 mouse_genomes_project 7 1514450 1525781 - MGP_NODShiLtJ_P0080954 Rdh13 protein_coding protein_coding MGP_NODShiLtJ_T0080955.1 MGP_NODShiLtJ_G0031355.1 mouse_genomes_project 7 1521008 1526193 - Rdh13 protein_coding retained_intron MGP_NODShiLtJ_T0080956.1 MGP_NODShiLtJ_G0031355.1 mouse_genomes_project 7 1523252 1526242 - Rdh13 protein_coding processed_transcript MGP_NODShiLtJ_T0080957.1 MGP_NODShiLtJ_G0031355.1 mouse_genomes_project 7 1524803 1526226 - Rdh13 protein_coding processed_transcript MGP_NODShiLtJ_T0086099.1 MGP_NODShiLtJ_G0032792.1 mouse_genomes_project 7 141621565 141633340 - MGP_NODShiLtJ_P0086099 Atxn2l protein_coding protein_coding MGP_NODShiLtJ_T0086100.1 MGP_NODShiLtJ_G0032792.1 mouse_genomes_project 7 141621572 141632321 - MGP_NODShiLtJ_P0086100 Atxn2l protein_coding protein_coding MGP_NODShiLtJ_T0086101.1 MGP_NODShiLtJ_G0032792.1 mouse_genomes_project 7 141621642 141633258 - MGP_NODShiLtJ_P0086101 Atxn2l protein_coding protein_coding MGP_NODShiLtJ_T0086102.1 MGP_NODShiLtJ_G0032792.1 mouse_genomes_project 7 141622008 141623232 - MGP_NODShiLtJ_P0086102 Atxn2l protein_coding protein_coding MGP_NODShiLtJ_T0086103.1 MGP_NODShiLtJ_G0032792.1 mouse_genomes_project 7 141622818 141632225 - MGP_NODShiLtJ_P0086103 Atxn2l protein_coding protein_coding MGP_NODShiLtJ_T0086104.1 MGP_NODShiLtJ_G0032792.1 mouse_genomes_project 7 141629056 141632007 - MGP_NODShiLtJ_P0086104 Atxn2l protein_coding protein_coding MGP_NODShiLtJ_T0005080.1 MGP_NODShiLtJ_G0004331.1 mouse_genomes_project 7 339039 348489 - Gm44151 antisense antisense MGP_NODShiLtJ_T0085654.1 MGP_NODShiLtJ_G0032696.1 mouse_genomes_project 7 130368737 130379849 + MGP_NODShiLtJ_P0085654 1110004F10Rik protein_coding protein_coding MGP_NODShiLtJ_T0087170.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157654824 157660379 + Tmem80 protein_coding processed_transcript MGP_NODShiLtJ_T0087171.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157654973 157664249 + MGP_NODShiLtJ_P0087171 Tmem80 protein_coding protein_coding MGP_NODShiLtJ_T0087172.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157654973 157663310 + MGP_NODShiLtJ_P0087172 Tmem80 protein_coding protein_coding MGP_NODShiLtJ_T0087173.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157655215 157663904 + MGP_NODShiLtJ_P0087173 Tmem80 protein_coding protein_coding MGP_NODShiLtJ_T0087174.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157655215 157664249 + MGP_NODShiLtJ_P0087174 Tmem80 protein_coding protein_coding MGP_NODShiLtJ_T0087175.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157655245 157660420 + Tmem80 protein_coding processed_transcript MGP_NODShiLtJ_T0087176.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157660406 157663906 + MGP_NODShiLtJ_P0087176 Tmem80 protein_coding protein_coding MGP_NODShiLtJ_T0087177.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157660473 157663160 + MGP_NODShiLtJ_P0087177 Tmem80 protein_coding protein_coding MGP_NODShiLtJ_T0087178.1 MGP_NODShiLtJ_G0033031.1 mouse_genomes_project 7 157660750 157663240 + Tmem80 protein_coding retained_intron MGP_NODShiLtJ_T0081493.1 MGP_NODShiLtJ_G0031540.1 mouse_genomes_project 7 16913535 16916536 + MGP_NODShiLtJ_P0081493 Ceacam14 protein_coding protein_coding MGP_NODShiLtJ_T0008748.1 MGP_NODShiLtJ_G0007061.1 mouse_genomes_project 7 31641195 31694706 + lincRNA lincRNA MGP_NODShiLtJ_T0015757.1 MGP_NODShiLtJ_G0013865.1 mouse_genomes_project 7 109316719 109317197 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087536.1 MGP_NODShiLtJ_G0033099.1 mouse_genomes_project 7 161518272 161522709 + MGP_NODShiLtJ_P0087536 Fgf15 protein_coding protein_coding MGP_NODShiLtJ_T0005246.1 MGP_NODShiLtJ_G0004446.1 mouse_genomes_project 7 148286434 148288685 + Gm16764 antisense antisense MGP_NODShiLtJ_T0005247.1 MGP_NODShiLtJ_G0004446.1 mouse_genomes_project 7 148286434 148288685 + Gm16764 antisense antisense MGP_NODShiLtJ_T0005248.1 MGP_NODShiLtJ_G0004446.1 mouse_genomes_project 7 148286450 148288685 + Gm16764 antisense antisense MGP_NODShiLtJ_T0087474.1 MGP_NODShiLtJ_G0033086.1 mouse_genomes_project 7 160258192 160263992 - Osbpl5 protein_coding retained_intron MGP_NODShiLtJ_T0087475.1 MGP_NODShiLtJ_G0033086.1 mouse_genomes_project 7 160258192 160310575 - MGP_NODShiLtJ_P0087475 Osbpl5 protein_coding protein_coding MGP_NODShiLtJ_T0087476.1 MGP_NODShiLtJ_G0033086.1 mouse_genomes_project 7 160258192 160312197 - MGP_NODShiLtJ_P0087476 Osbpl5 protein_coding protein_coding MGP_NODShiLtJ_T0087477.1 MGP_NODShiLtJ_G0033086.1 mouse_genomes_project 7 160263694 160264518 - Osbpl5 protein_coding retained_intron MGP_NODShiLtJ_T0087478.1 MGP_NODShiLtJ_G0033086.1 mouse_genomes_project 7 160273288 160275353 - Osbpl5 protein_coding retained_intron MGP_NODShiLtJ_T0087479.1 MGP_NODShiLtJ_G0033086.1 mouse_genomes_project 7 160279284 160330672 - MGP_NODShiLtJ_P0087479 Osbpl5 protein_coding protein_coding MGP_NODShiLtJ_T0087480.1 MGP_NODShiLtJ_G0033086.1 mouse_genomes_project 7 160283729 160310533 - Osbpl5 protein_coding processed_transcript MGP_NODShiLtJ_T0085731.1 MGP_NODShiLtJ_G0032711.1 mouse_genomes_project 7 133209607 133233577 + MGP_NODShiLtJ_P0085731 Ccp110 protein_coding protein_coding MGP_NODShiLtJ_T0085732.1 MGP_NODShiLtJ_G0032711.1 mouse_genomes_project 7 133212429 133233574 + MGP_NODShiLtJ_P0085732 Ccp110 protein_coding protein_coding MGP_NODShiLtJ_T0085733.1 MGP_NODShiLtJ_G0032711.1 mouse_genomes_project 7 133218449 133233569 + Ccp110 protein_coding retained_intron MGP_NODShiLtJ_T0085734.1 MGP_NODShiLtJ_G0032711.1 mouse_genomes_project 7 133222533 133233577 + Ccp110 protein_coding retained_intron MGP_NODShiLtJ_T0085735.1 MGP_NODShiLtJ_G0032711.1 mouse_genomes_project 7 133226819 133229015 + Ccp110 protein_coding retained_intron MGP_NODShiLtJ_T0008802.1 MGP_NODShiLtJ_G0007103.1 mouse_genomes_project 7 70469630 70474956 + Gm20670 lincRNA lincRNA MGP_NODShiLtJ_T0085445.1 MGP_NODShiLtJ_G0032650.1 mouse_genomes_project 7 123150960 123154185 + MGP_NODShiLtJ_P0085445 Rpl27a protein_coding protein_coding MGP_NODShiLtJ_T0085446.1 MGP_NODShiLtJ_G0032650.1 mouse_genomes_project 7 123151009 123152971 + Rpl27a protein_coding retained_intron MGP_NODShiLtJ_T0085447.1 MGP_NODShiLtJ_G0032650.1 mouse_genomes_project 7 123151012 123151995 + Rpl27a protein_coding retained_intron MGP_NODShiLtJ_T0085448.1 MGP_NODShiLtJ_G0032650.1 mouse_genomes_project 7 123151026 123153584 + Rpl27a protein_coding retained_intron MGP_NODShiLtJ_T0085449.1 MGP_NODShiLtJ_G0032650.1 mouse_genomes_project 7 123151033 123152413 + MGP_NODShiLtJ_P0085449 Rpl27a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085450.1 MGP_NODShiLtJ_G0032650.1 mouse_genomes_project 7 123151083 123151754 + Rpl27a protein_coding retained_intron MGP_NODShiLtJ_T0087036.1 MGP_NODShiLtJ_G0032994.1 mouse_genomes_project 7 156942129 156943055 + MGP_NODShiLtJ_P0087036 Olfr45 protein_coding protein_coding MGP_NODShiLtJ_T0083009.1 MGP_NODShiLtJ_G0031918.1 mouse_genomes_project 7 39662811 39733889 + MGP_NODShiLtJ_P0083009 protein_coding protein_coding MGP_NODShiLtJ_T0083010.1 MGP_NODShiLtJ_G0031918.1 mouse_genomes_project 7 39662834 39663494 + protein_coding processed_transcript MGP_NODShiLtJ_T0083011.1 MGP_NODShiLtJ_G0031918.1 mouse_genomes_project 7 39662855 39732182 + MGP_NODShiLtJ_P0083011 protein_coding protein_coding MGP_NODShiLtJ_T0083012.1 MGP_NODShiLtJ_G0031918.1 mouse_genomes_project 7 39663247 39733889 + MGP_NODShiLtJ_P0083012 protein_coding protein_coding MGP_NODShiLtJ_T0083013.1 MGP_NODShiLtJ_G0031918.1 mouse_genomes_project 7 39663442 39716491 + MGP_NODShiLtJ_P0083013 protein_coding protein_coding MGP_NODShiLtJ_T0083014.1 MGP_NODShiLtJ_G0031918.1 mouse_genomes_project 7 39663492 39723365 + MGP_NODShiLtJ_P0083014 protein_coding protein_coding MGP_NODShiLtJ_T0083015.1 MGP_NODShiLtJ_G0031918.1 mouse_genomes_project 7 39713847 39723660 + MGP_NODShiLtJ_P0083015 protein_coding protein_coding MGP_NODShiLtJ_T0085430.1 MGP_NODShiLtJ_G0032646.1 mouse_genomes_project 7 122630427 122686907 - MGP_NODShiLtJ_P0085430 Ric3 protein_coding protein_coding MGP_NODShiLtJ_T0085431.1 MGP_NODShiLtJ_G0032646.1 mouse_genomes_project 7 122630427 122654020 - MGP_NODShiLtJ_P0085431 Ric3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085432.1 MGP_NODShiLtJ_G0032646.1 mouse_genomes_project 7 122634091 122686898 - MGP_NODShiLtJ_P0085432 Ric3 protein_coding protein_coding MGP_NODShiLtJ_T0085433.1 MGP_NODShiLtJ_G0032646.1 mouse_genomes_project 7 122653682 122686898 - Ric3 protein_coding retained_intron MGP_NODShiLtJ_T0085434.1 MGP_NODShiLtJ_G0032646.1 mouse_genomes_project 7 122684319 122686881 - Ric3 protein_coding processed_transcript MGP_NODShiLtJ_T0085843.1 MGP_NODShiLtJ_G0032740.1 mouse_genomes_project 7 135407017 135465292 + MGP_NODShiLtJ_P0085843 BC030336 protein_coding protein_coding MGP_NODShiLtJ_T0087347.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158927306 158961360 + MGP_NODShiLtJ_P0087347 Lsp1 protein_coding protein_coding MGP_NODShiLtJ_T0087348.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158927343 158961360 + MGP_NODShiLtJ_P0087348 Lsp1 protein_coding protein_coding MGP_NODShiLtJ_T0087349.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158927361 158961096 + MGP_NODShiLtJ_P0087349 Lsp1 protein_coding protein_coding MGP_NODShiLtJ_T0087350.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158938340 158961092 + MGP_NODShiLtJ_P0087350 Lsp1 protein_coding protein_coding MGP_NODShiLtJ_T0087351.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158938369 158954864 + Lsp1 protein_coding retained_intron MGP_NODShiLtJ_T0087352.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158938648 158961093 + MGP_NODShiLtJ_P0087352 Lsp1 protein_coding protein_coding MGP_NODShiLtJ_T0087353.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158941491 158952997 + Lsp1 protein_coding processed_transcript MGP_NODShiLtJ_T0087354.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158943510 158961360 + Lsp1 protein_coding processed_transcript MGP_NODShiLtJ_T0087355.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158949751 158956476 + Lsp1 protein_coding processed_transcript MGP_NODShiLtJ_T0087356.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158949896 158952973 + Lsp1 protein_coding processed_transcript MGP_NODShiLtJ_T0087357.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158955509 158956915 + Lsp1 protein_coding retained_intron MGP_NODShiLtJ_T0087358.1 MGP_NODShiLtJ_G0033064.1 mouse_genomes_project 7 158956305 158961010 + Lsp1 protein_coding retained_intron MGP_NODShiLtJ_T0100776.1 MGP_NODShiLtJ_G0039170.1 mouse_genomes_project 7 130634500 130634587 - Snord14a snoRNA snoRNA MGP_NODShiLtJ_T0082108.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27610004 27627571 - MGP_NODShiLtJ_P0082108 Shkbp1 protein_coding protein_coding MGP_NODShiLtJ_T0082109.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27610008 27627506 - Shkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0082110.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27610008 27627295 - Shkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0082111.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27610009 27613482 - Shkbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0082112.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27610283 27610793 - Shkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0082113.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27611023 27616304 - Shkbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0082114.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27612858 27615331 - Shkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0082115.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27615976 27619984 - Shkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0082116.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27621932 27627311 - Shkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0082117.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27621973 27627474 - Shkbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0082119.1 MGP_NODShiLtJ_G0031722.1 mouse_genomes_project 7 27625630 27627323 - Shkbp1 protein_coding retained_intron MGP_NODShiLtJ_T0010784.1 MGP_NODShiLtJ_G0008917.1 mouse_genomes_project 7 68028164 68028244 - Mir344-2 miRNA miRNA MGP_NODShiLtJ_T0087537.1 MGP_NODShiLtJ_G0033100.1 mouse_genomes_project 7 161536838 161554635 + MGP_NODShiLtJ_P0087537 Oraov1 protein_coding protein_coding MGP_NODShiLtJ_T0087538.1 MGP_NODShiLtJ_G0033100.1 mouse_genomes_project 7 161538085 161545055 + MGP_NODShiLtJ_P0087538 Oraov1 protein_coding protein_coding MGP_NODShiLtJ_T0087539.1 MGP_NODShiLtJ_G0033100.1 mouse_genomes_project 7 161538121 161540652 + Oraov1 protein_coding retained_intron MGP_NODShiLtJ_T0087540.1 MGP_NODShiLtJ_G0033100.1 mouse_genomes_project 7 161538123 161539408 + Oraov1 protein_coding processed_transcript MGP_NODShiLtJ_T0087541.1 MGP_NODShiLtJ_G0033100.1 mouse_genomes_project 7 161538130 161553375 + MGP_NODShiLtJ_P0087541 Oraov1 protein_coding protein_coding MGP_NODShiLtJ_T0087542.1 MGP_NODShiLtJ_G0033100.1 mouse_genomes_project 7 161539086 161543750 + Oraov1 protein_coding retained_intron MGP_NODShiLtJ_T0005167.1 MGP_NODShiLtJ_G0004390.1 mouse_genomes_project 7 70777550 70785894 - Gm20457 antisense antisense MGP_NODShiLtJ_T0010736.1 MGP_NODShiLtJ_G0008869.1 mouse_genomes_project 7 18543023 18543121 + Mir330 miRNA miRNA MGP_NODShiLtJ_T0085555.1 MGP_NODShiLtJ_G0032675.1 mouse_genomes_project 7 125974265 126021977 - MGP_NODShiLtJ_P0085555 Dkk3 protein_coding protein_coding MGP_NODShiLtJ_T0083530.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48565360 48572692 + MGP_NODShiLtJ_P0083530 Rpl18 protein_coding protein_coding MGP_NODShiLtJ_T0083531.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48568029 48572693 + MGP_NODShiLtJ_P0083531 Rpl18 protein_coding protein_coding MGP_NODShiLtJ_T0083532.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48568095 48572693 + MGP_NODShiLtJ_P0083532 Rpl18 protein_coding protein_coding MGP_NODShiLtJ_T0083533.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48569110 48571983 + Rpl18 protein_coding retained_intron MGP_NODShiLtJ_T0083534.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48569167 48572215 + MGP_NODShiLtJ_P0083534 Rpl18 protein_coding protein_coding MGP_NODShiLtJ_T0083535.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48569220 48572643 + Rpl18 protein_coding retained_intron MGP_NODShiLtJ_T0083536.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48571453 48572685 + MGP_NODShiLtJ_P0083536 Rpl18 protein_coding protein_coding MGP_NODShiLtJ_T0083537.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48571478 48572688 + MGP_NODShiLtJ_P0083537 Rpl18 protein_coding protein_coding MGP_NODShiLtJ_T0083538.1 MGP_NODShiLtJ_G0032060.1 mouse_genomes_project 7 48572012 48572688 + Rpl18 protein_coding retained_intron MGP_NODShiLtJ_T0005179.1 MGP_NODShiLtJ_G0004399.1 mouse_genomes_project 7 88045195 88048900 + Gm26646 antisense antisense MGP_NODShiLtJ_T0005180.1 MGP_NODShiLtJ_G0004399.1 mouse_genomes_project 7 88047227 88048900 + Gm26646 antisense antisense MGP_NODShiLtJ_T0084473.1 MGP_NODShiLtJ_G0032266.1 mouse_genomes_project 7 92141685 92154337 - Il16 protein_coding retained_intron MGP_NODShiLtJ_T0084474.1 MGP_NODShiLtJ_G0032266.1 mouse_genomes_project 7 92141901 92247462 - MGP_NODShiLtJ_P0084474 Il16 protein_coding protein_coding MGP_NODShiLtJ_T0084475.1 MGP_NODShiLtJ_G0032266.1 mouse_genomes_project 7 92148422 92154167 - Il16 protein_coding retained_intron MGP_NODShiLtJ_T0084476.1 MGP_NODShiLtJ_G0032266.1 mouse_genomes_project 7 92159726 92257650 - MGP_NODShiLtJ_P0084476 Il16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084477.1 MGP_NODShiLtJ_G0032266.1 mouse_genomes_project 7 92234438 92244334 - MGP_NODShiLtJ_P0084477 Il16 protein_coding protein_coding MGP_NODShiLtJ_T0084478.1 MGP_NODShiLtJ_G0032266.1 mouse_genomes_project 7 92234438 92251853 - MGP_NODShiLtJ_P0084478 Il16 protein_coding protein_coding MGP_NODShiLtJ_T0010803.1 MGP_NODShiLtJ_G0008936.1 mouse_genomes_project 7 111368828 111368923 + Mir326 miRNA miRNA MGP_NODShiLtJ_T0101197.1 MGP_NODShiLtJ_G0039505.1 mouse_genomes_project 7 143644422 143671835 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101198.1 MGP_NODShiLtJ_G0039505.1 mouse_genomes_project 7 143671231 143671426 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0081196.1 MGP_NODShiLtJ_G0031440.1 mouse_genomes_project 7 8642945 8645034 - MGP_NODShiLtJ_P0081196 Vmn1r71 protein_coding protein_coding MGP_NODShiLtJ_T0085396.1 MGP_NODShiLtJ_G0032616.1 mouse_genomes_project 7 121455708 121456737 - MGP_NODShiLtJ_P0085396 Olfr480 protein_coding protein_coding MGP_NODShiLtJ_T0008972.1 MGP_NODShiLtJ_G0007214.1 mouse_genomes_project 7 151075481 151081067 - 1700120G07Rik lincRNA lincRNA MGP_NODShiLtJ_T0008973.1 MGP_NODShiLtJ_G0007214.1 mouse_genomes_project 7 151076618 151081067 - 1700120G07Rik lincRNA lincRNA MGP_NODShiLtJ_T0005188.1 MGP_NODShiLtJ_G0004405.1 mouse_genomes_project 7 91147279 91159516 - 4933406J10Rik antisense antisense MGP_NODShiLtJ_T0082056.1 MGP_NODShiLtJ_G0031709.1 mouse_genomes_project 7 27360454 27374112 + MGP_NODShiLtJ_P0082056 Cyp2f2 protein_coding protein_coding MGP_NODShiLtJ_T0082057.1 MGP_NODShiLtJ_G0031709.1 mouse_genomes_project 7 27360506 27366004 + Cyp2f2 protein_coding processed_transcript MGP_NODShiLtJ_T0082058.1 MGP_NODShiLtJ_G0031709.1 mouse_genomes_project 7 27362356 27371694 + MGP_NODShiLtJ_P0082058 Cyp2f2 protein_coding protein_coding MGP_NODShiLtJ_T0080947.1 MGP_NODShiLtJ_G0031352.1 mouse_genomes_project 7 1296045 1301734 + MGP_NODShiLtJ_P0080947 Lilra5 protein_coding protein_coding MGP_NODShiLtJ_T0084141.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87212631 87222606 - Mfge8 protein_coding retained_intron MGP_NODShiLtJ_T0084142.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87212631 87227878 - MGP_NODShiLtJ_P0084142 Mfge8 protein_coding protein_coding MGP_NODShiLtJ_T0084143.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87212632 87227885 - MGP_NODShiLtJ_P0084143 Mfge8 protein_coding protein_coding MGP_NODShiLtJ_T0084144.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87212979 87227856 - MGP_NODShiLtJ_P0084144 Mfge8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0084145.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87213002 87215853 - Mfge8 protein_coding retained_intron MGP_NODShiLtJ_T0084146.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87215360 87221627 - Mfge8 protein_coding retained_intron MGP_NODShiLtJ_T0084147.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87220697 87221870 - Mfge8 protein_coding retained_intron MGP_NODShiLtJ_T0084148.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87221688 87226384 - Mfge8 protein_coding processed_transcript MGP_NODShiLtJ_T0084149.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87223740 87227814 - Mfge8 protein_coding retained_intron MGP_NODShiLtJ_T0084150.1 MGP_NODShiLtJ_G0032202.1 mouse_genomes_project 7 87224154 87227053 - Mfge8 protein_coding processed_transcript MGP_NODShiLtJ_T0102136.1 MGP_NODShiLtJ_G0040302.1 mouse_genomes_project 7 46758799 46761100 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0081766.1 MGP_NODShiLtJ_G0031635.1 mouse_genomes_project 7 23977578 23988268 + MGP_NODShiLtJ_P0081766 Zfp93 protein_coding protein_coding MGP_NODShiLtJ_T0081696.1 MGP_NODShiLtJ_G0031603.1 mouse_genomes_project 7 19174976 19191151 - MGP_NODShiLtJ_P0081696 Bcam protein_coding protein_coding MGP_NODShiLtJ_T0081697.1 MGP_NODShiLtJ_G0031603.1 mouse_genomes_project 7 19175405 19175800 - Bcam protein_coding retained_intron MGP_NODShiLtJ_T0081698.1 MGP_NODShiLtJ_G0031603.1 mouse_genomes_project 7 19182198 19191099 - Bcam protein_coding retained_intron MGP_NODShiLtJ_T0081699.1 MGP_NODShiLtJ_G0031603.1 mouse_genomes_project 7 19186182 19191620 - MGP_NODShiLtJ_P0081699 Bcam protein_coding protein_coding MGP_NODShiLtJ_T0081700.1 MGP_NODShiLtJ_G0031603.1 mouse_genomes_project 7 19187562 19191099 - MGP_NODShiLtJ_P0081700 Bcam protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015809.1 MGP_NODShiLtJ_G0013917.1 mouse_genomes_project 7 144400923 144401609 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100740.1 MGP_NODShiLtJ_G0039134.1 mouse_genomes_project 7 47907713 47907796 - Snord32a snoRNA snoRNA MGP_NODShiLtJ_T0083447.1 MGP_NODShiLtJ_G0032038.1 mouse_genomes_project 7 48232022 48249477 - MGP_NODShiLtJ_P0083447 Ruvbl2 protein_coding protein_coding MGP_NODShiLtJ_T0083448.1 MGP_NODShiLtJ_G0032038.1 mouse_genomes_project 7 48232068 48244794 - MGP_NODShiLtJ_P0083448 Ruvbl2 protein_coding protein_coding MGP_NODShiLtJ_T0083449.1 MGP_NODShiLtJ_G0032038.1 mouse_genomes_project 7 48235121 48244880 - MGP_NODShiLtJ_P0083449 Ruvbl2 protein_coding protein_coding MGP_NODShiLtJ_T0086912.1 MGP_NODShiLtJ_G0032951.1 mouse_genomes_project 7 154977336 154996546 - MGP_NODShiLtJ_P0086912 Bnip3 protein_coding protein_coding MGP_NODShiLtJ_T0086913.1 MGP_NODShiLtJ_G0032951.1 mouse_genomes_project 7 154981312 154996535 - Bnip3 protein_coding processed_transcript MGP_NODShiLtJ_T0086914.1 MGP_NODShiLtJ_G0032951.1 mouse_genomes_project 7 154981641 154985307 - Bnip3 protein_coding processed_transcript MGP_NODShiLtJ_T0086915.1 MGP_NODShiLtJ_G0032951.1 mouse_genomes_project 7 154985570 154996559 - Bnip3 protein_coding processed_transcript MGP_NODShiLtJ_T0086916.1 MGP_NODShiLtJ_G0032951.1 mouse_genomes_project 7 154985740 154996519 - Bnip3 protein_coding processed_transcript MGP_NODShiLtJ_T0087179.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157665972 157693559 + MGP_NODShiLtJ_P0087179 Eps8l2 protein_coding protein_coding MGP_NODShiLtJ_T0087180.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157666048 157693559 + Eps8l2 protein_coding retained_intron MGP_NODShiLtJ_T0087181.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157666079 157685092 + Eps8l2 protein_coding processed_transcript MGP_NODShiLtJ_T0087182.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157666096 157685090 + Eps8l2 protein_coding retained_intron MGP_NODShiLtJ_T0087183.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157666098 157670083 + MGP_NODShiLtJ_P0087183 Eps8l2 protein_coding protein_coding MGP_NODShiLtJ_T0087184.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157669748 157685227 + Eps8l2 protein_coding retained_intron MGP_NODShiLtJ_T0087185.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157687234 157691954 + Eps8l2 protein_coding retained_intron MGP_NODShiLtJ_T0087186.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157687441 157692273 + Eps8l2 protein_coding processed_transcript MGP_NODShiLtJ_T0087187.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157690784 157692271 + Eps8l2 protein_coding processed_transcript MGP_NODShiLtJ_T0087188.1 MGP_NODShiLtJ_G0033032.1 mouse_genomes_project 7 157692075 157693206 + Eps8l2 protein_coding processed_transcript MGP_NODShiLtJ_T0083493.1 MGP_NODShiLtJ_G0032048.1 mouse_genomes_project 7 48390064 48426441 + MGP_NODShiLtJ_P0083493 Bcat2 protein_coding protein_coding MGP_NODShiLtJ_T0083499.1 MGP_NODShiLtJ_G0032048.1 mouse_genomes_project 7 48405074 48426435 + MGP_NODShiLtJ_P0083499 Bcat2 protein_coding protein_coding MGP_NODShiLtJ_T0083500.1 MGP_NODShiLtJ_G0032048.1 mouse_genomes_project 7 48405271 48422427 + Bcat2 protein_coding retained_intron MGP_NODShiLtJ_T0083501.1 MGP_NODShiLtJ_G0032048.1 mouse_genomes_project 7 48405294 48426435 + MGP_NODShiLtJ_P0083501 Bcat2 protein_coding protein_coding MGP_NODShiLtJ_T0083502.1 MGP_NODShiLtJ_G0032048.1 mouse_genomes_project 7 48407790 48426435 + MGP_NODShiLtJ_P0083502 Bcat2 protein_coding protein_coding MGP_NODShiLtJ_T0083503.1 MGP_NODShiLtJ_G0032048.1 mouse_genomes_project 7 48410021 48420693 + MGP_NODShiLtJ_P0083503 Bcat2 protein_coding protein_coding MGP_NODShiLtJ_T0083504.1 MGP_NODShiLtJ_G0032048.1 mouse_genomes_project 7 48410143 48420812 + Bcat2 protein_coding retained_intron MGP_NODShiLtJ_T0086882.1 MGP_NODShiLtJ_G0032940.1 mouse_genomes_project 7 151313291 151316540 + MGP_NODShiLtJ_P0086882 Foxi2 protein_coding protein_coding MGP_NODShiLtJ_T0083140.1 MGP_NODShiLtJ_G0031963.1 mouse_genomes_project 7 46428921 46435187 + MGP_NODShiLtJ_P0083140 Klk9 protein_coding protein_coding MGP_NODShiLtJ_T0015768.1 MGP_NODShiLtJ_G0013876.1 mouse_genomes_project 7 115367928 115368591 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0083053.1 MGP_NODShiLtJ_G0031932.1 mouse_genomes_project 7 43937116 43959342 - MGP_NODShiLtJ_P0083053 protein_coding protein_coding MGP_NODShiLtJ_T0083770.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60735224 60776505 + MGP_NODShiLtJ_P0083770 Tubgcp5 protein_coding protein_coding MGP_NODShiLtJ_T0083771.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60735235 60768440 + Tubgcp5 protein_coding retained_intron MGP_NODShiLtJ_T0083772.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60735238 60776274 + MGP_NODShiLtJ_P0083772 Tubgcp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0083773.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60735262 60776274 + MGP_NODShiLtJ_P0083773 Tubgcp5 protein_coding protein_coding MGP_NODShiLtJ_T0083774.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60735296 60739984 + MGP_NODShiLtJ_P0083774 Tubgcp5 protein_coding protein_coding MGP_NODShiLtJ_T0083775.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60745696 60750021 + Tubgcp5 protein_coding retained_intron MGP_NODShiLtJ_T0083776.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60747349 60759063 + Tubgcp5 protein_coding retained_intron MGP_NODShiLtJ_T0083777.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60758610 60760335 + Tubgcp5 protein_coding retained_intron MGP_NODShiLtJ_T0083778.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60762953 60773275 + Tubgcp5 protein_coding retained_intron MGP_NODShiLtJ_T0083779.1 MGP_NODShiLtJ_G0032129.1 mouse_genomes_project 7 60767621 60776065 + MGP_NODShiLtJ_P0083779 Tubgcp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082077.1 MGP_NODShiLtJ_G0031715.1 mouse_genomes_project 7 27439620 27448040 - MGP_NODShiLtJ_P0082077 Snrpa protein_coding protein_coding MGP_NODShiLtJ_T0082078.1 MGP_NODShiLtJ_G0031715.1 mouse_genomes_project 7 27443995 27448304 - MGP_NODShiLtJ_P0082078 Snrpa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0082079.1 MGP_NODShiLtJ_G0031715.1 mouse_genomes_project 7 27446743 27448433 - Snrpa protein_coding retained_intron MGP_NODShiLtJ_T0081097.1 MGP_NODShiLtJ_G0031386.1 mouse_genomes_project 7 2208677 2211556 + MGP_NODShiLtJ_P0081097 Zfp524 protein_coding protein_coding MGP_NODShiLtJ_T0010746.1 MGP_NODShiLtJ_G0008879.1 mouse_genomes_project 7 27460637 27460757 + Mir1191 miRNA miRNA MGP_NODShiLtJ_T0010792.1 MGP_NODShiLtJ_G0008925.1 mouse_genomes_project 7 72973345 72973403 - Mir7057 miRNA miRNA MGP_NODShiLtJ_T0081164.1 MGP_NODShiLtJ_G0031420.1 mouse_genomes_project 7 3892214 3893020 - MGP_NODShiLtJ_P0081164 protein_coding protein_coding MGP_NODShiLtJ_T0015784.1 MGP_NODShiLtJ_G0013892.1 mouse_genomes_project 7 136005352 136006094 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081490.1 MGP_NODShiLtJ_G0031537.1 mouse_genomes_project 7 16110757 16127360 + MGP_NODShiLtJ_P0081490 Ceacam3 protein_coding protein_coding MGP_NODShiLtJ_T0085925.1 MGP_NODShiLtJ_G0032761.1 mouse_genomes_project 7 136987375 137001427 + MGP_NODShiLtJ_P0085925 Plk1 protein_coding protein_coding MGP_NODShiLtJ_T0085926.1 MGP_NODShiLtJ_G0032761.1 mouse_genomes_project 7 136987443 136994056 + MGP_NODShiLtJ_P0085926 Plk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085927.1 MGP_NODShiLtJ_G0032761.1 mouse_genomes_project 7 136987517 136989584 + MGP_NODShiLtJ_P0085927 Plk1 protein_coding protein_coding MGP_NODShiLtJ_T0008881.1 MGP_NODShiLtJ_G0007154.1 mouse_genomes_project 7 98388801 98396660 - Gm26522 lincRNA lincRNA MGP_NODShiLtJ_T0002248.1 MGP_NODShiLtJ_G0002159.1 mouse_genomes_project 7 137158827 137164266 + TEC TEC MGP_NODShiLtJ_T0015735.1 MGP_NODShiLtJ_G0013843.1 mouse_genomes_project 7 89433916 89434264 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0086741.1 MGP_NODShiLtJ_G0032905.1 mouse_genomes_project 7 146776372 146873046 + MGP_NODShiLtJ_P0086741 5430419D17Rik protein_coding protein_coding MGP_NODShiLtJ_T0086742.1 MGP_NODShiLtJ_G0032905.1 mouse_genomes_project 7 146820104 146855732 + 5430419D17Rik protein_coding retained_intron MGP_NODShiLtJ_T0085335.1 MGP_NODShiLtJ_G0032571.1 mouse_genomes_project 7 118727446 118735282 - MGP_NODShiLtJ_P0085335 Tpp1 protein_coding protein_coding MGP_NODShiLtJ_T0082260.1 MGP_NODShiLtJ_G0031761.1 mouse_genomes_project 7 28858239 28882325 + MGP_NODShiLtJ_P0082260 Gmfg protein_coding protein_coding MGP_NODShiLtJ_T0082261.1 MGP_NODShiLtJ_G0031761.1 mouse_genomes_project 7 28867563 28873756 + MGP_NODShiLtJ_P0082261 Gmfg protein_coding unknown_likely_coding MGP_NODShiLtJ_T0082262.1 MGP_NODShiLtJ_G0031761.1 mouse_genomes_project 7 28870319 28884055 + Gmfg protein_coding processed_transcript MGP_NODShiLtJ_T0081959.1 MGP_NODShiLtJ_G0031682.1 mouse_genomes_project 7 25353619 25374078 - MGP_NODShiLtJ_P0081959 Ceacam2 protein_coding protein_coding MGP_NODShiLtJ_T0081960.1 MGP_NODShiLtJ_G0031682.1 mouse_genomes_project 7 25354421 25374082 - Ceacam2 protein_coding retained_intron MGP_NODShiLtJ_T0081961.1 MGP_NODShiLtJ_G0031682.1 mouse_genomes_project 7 25354775 25374140 - MGP_NODShiLtJ_P0081961 Ceacam2 protein_coding protein_coding MGP_NODShiLtJ_T0081962.1 MGP_NODShiLtJ_G0031682.1 mouse_genomes_project 7 25354775 25374039 - MGP_NODShiLtJ_P0081962 Ceacam2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0081963.1 MGP_NODShiLtJ_G0031682.1 mouse_genomes_project 7 25354775 25374140 - MGP_NODShiLtJ_P0081963 Ceacam2 protein_coding protein_coding MGP_NODShiLtJ_T0081964.1 MGP_NODShiLtJ_G0031682.1 mouse_genomes_project 7 25355540 25374078 - MGP_NODShiLtJ_P0081964 Ceacam2 protein_coding protein_coding MGP_NODShiLtJ_T0081965.1 MGP_NODShiLtJ_G0031682.1 mouse_genomes_project 7 25370460 25433566 - Ceacam2 protein_coding retained_intron MGP_NODShiLtJ_T0081966.1 MGP_NODShiLtJ_G0031682.1 mouse_genomes_project 7 25370461 25434341 - Ceacam2 protein_coding retained_intron MGP_NODShiLtJ_T0099475.1 MGP_NODShiLtJ_G0037869.1 mouse_genomes_project 7 15895591 15895698 - Gm25815 snRNA snRNA MGP_NODShiLtJ_T0015764.1 MGP_NODShiLtJ_G0013872.1 mouse_genomes_project 7 112553437 112553874 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0081968.1 MGP_NODShiLtJ_G0031683.1 mouse_genomes_project 7 25536316 25537587 - MGP_NODShiLtJ_P0081968 Erich4 protein_coding protein_coding MGP_NODShiLtJ_T0085928.1 MGP_NODShiLtJ_G0032762.1 mouse_genomes_project 7 137001446 137017747 - MGP_NODShiLtJ_P0085928 Ern2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0085929.1 MGP_NODShiLtJ_G0032762.1 mouse_genomes_project 7 137001493 137017744 - MGP_NODShiLtJ_P0085929 Ern2 protein_coding protein_coding MGP_NODShiLtJ_T0085930.1 MGP_NODShiLtJ_G0032762.1 mouse_genomes_project 7 137001621 137015495 - MGP_NODShiLtJ_P0085930 Ern2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087428.1 MGP_NODShiLtJ_G0033074.1 mouse_genomes_project 7 159552379 159567574 + MGP_NODShiLtJ_P0087428 Cd81 protein_coding protein_coding MGP_NODShiLtJ_T0087429.1 MGP_NODShiLtJ_G0033074.1 mouse_genomes_project 7 159552434 159565253 + Cd81 protein_coding retained_intron MGP_NODShiLtJ_T0087430.1 MGP_NODShiLtJ_G0033074.1 mouse_genomes_project 7 159558214 159566802 + Cd81 protein_coding processed_transcript MGP_NODShiLtJ_T0087431.1 MGP_NODShiLtJ_G0033074.1 mouse_genomes_project 7 159565840 159567245 + Cd81 protein_coding retained_intron MGP_NODShiLtJ_T0085218.1 MGP_NODShiLtJ_G0032534.1 mouse_genomes_project 7 117553255 117554206 + MGP_NODShiLtJ_P0085218 Olfr665 protein_coding protein_coding MGP_NODShiLtJ_T0006022.1 MGP_NODShiLtJ_G0005036.1 mouse_genomes_project 10 23907784 23914143 + Gm15137 lincRNA lincRNA MGP_NODShiLtJ_T0024588.1 MGP_NODShiLtJ_G0016941.1 mouse_genomes_project 10 23641708 23642822 + MGP_NODShiLtJ_P0024588 Taar1 protein_coding protein_coding MGP_NODShiLtJ_T0003053.1 MGP_NODShiLtJ_G0002838.1 mouse_genomes_project 10 136128363 136130963 + Gm4473 antisense antisense MGP_NODShiLtJ_T0026936.1 MGP_NODShiLtJ_G0017612.1 mouse_genomes_project 10 131706320 131747541 + MGP_NODShiLtJ_P0026936 Best3 protein_coding protein_coding MGP_NODShiLtJ_T0099838.1 MGP_NODShiLtJ_G0038232.1 mouse_genomes_project 10 12322533 12322644 + Gm24343 snoRNA snoRNA MGP_NODShiLtJ_T0025913.1 MGP_NODShiLtJ_G0017329.1 mouse_genomes_project 10 88431700 88447657 - MGP_NODShiLtJ_P0025913 Med16 protein_coding protein_coding MGP_NODShiLtJ_T0025914.1 MGP_NODShiLtJ_G0017329.1 mouse_genomes_project 10 88431927 88447634 - MGP_NODShiLtJ_P0025914 Med16 protein_coding protein_coding MGP_NODShiLtJ_T0025915.1 MGP_NODShiLtJ_G0017329.1 mouse_genomes_project 10 88436486 88437936 - Med16 protein_coding retained_intron MGP_NODShiLtJ_T0025916.1 MGP_NODShiLtJ_G0017329.1 mouse_genomes_project 10 88440088 88447554 - Med16 protein_coding retained_intron MGP_NODShiLtJ_T0025917.1 MGP_NODShiLtJ_G0017329.1 mouse_genomes_project 10 88441429 88447646 - MGP_NODShiLtJ_P0025917 Med16 protein_coding protein_coding MGP_NODShiLtJ_T0025918.1 MGP_NODShiLtJ_G0017329.1 mouse_genomes_project 10 88441605 88447057 - MGP_NODShiLtJ_P0025918 Med16 protein_coding protein_coding MGP_NODShiLtJ_T0025919.1 MGP_NODShiLtJ_G0017329.1 mouse_genomes_project 10 88441632 88447659 - MGP_NODShiLtJ_P0025919 Med16 protein_coding protein_coding MGP_NODShiLtJ_T0009558.1 MGP_NODShiLtJ_G0007691.1 mouse_genomes_project 10 144965647 144965708 - Mir6917 miRNA miRNA MGP_NODShiLtJ_T0026431.1 MGP_NODShiLtJ_G0017455.1 mouse_genomes_project 10 93649983 93693485 + MGP_NODShiLtJ_P0026431 Tcp11l2 protein_coding protein_coding MGP_NODShiLtJ_T0026432.1 MGP_NODShiLtJ_G0017455.1 mouse_genomes_project 10 93650254 93671087 + Tcp11l2 protein_coding retained_intron MGP_NODShiLtJ_T0026433.1 MGP_NODShiLtJ_G0017455.1 mouse_genomes_project 10 93670441 93684154 + Tcp11l2 protein_coding retained_intron MGP_NODShiLtJ_T0002974.1 MGP_NODShiLtJ_G0002781.1 mouse_genomes_project 10 41906193 41937810 - Gm16365 antisense antisense MGP_NODShiLtJ_T0002975.1 MGP_NODShiLtJ_G0002781.1 mouse_genomes_project 10 41907722 41963355 - Gm16365 antisense antisense MGP_NODShiLtJ_T0002976.1 MGP_NODShiLtJ_G0002781.1 mouse_genomes_project 10 41910077 41963359 - Gm16365 antisense antisense MGP_NODShiLtJ_T0002977.1 MGP_NODShiLtJ_G0002781.1 mouse_genomes_project 10 41945147 41963370 - Gm16365 antisense antisense MGP_NODShiLtJ_T0098635.1 MGP_NODShiLtJ_G0037029.1 mouse_genomes_project 10 89087744 89087848 + Gm25044 snRNA snRNA MGP_NODShiLtJ_T0012313.1 MGP_NODShiLtJ_G0010421.1 mouse_genomes_project 10 95330637 95330754 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026946.1 MGP_NODShiLtJ_G0017621.1 mouse_genomes_project 10 132144752 132182099 - MGP_NODShiLtJ_P0026946 Cpsf6 protein_coding protein_coding MGP_NODShiLtJ_T0026947.1 MGP_NODShiLtJ_G0017621.1 mouse_genomes_project 10 132150685 132182102 - MGP_NODShiLtJ_P0026947 Cpsf6 protein_coding protein_coding MGP_NODShiLtJ_T0026948.1 MGP_NODShiLtJ_G0017621.1 mouse_genomes_project 10 132150688 132182058 - MGP_NODShiLtJ_P0026948 Cpsf6 protein_coding protein_coding MGP_NODShiLtJ_T0026949.1 MGP_NODShiLtJ_G0017621.1 mouse_genomes_project 10 132151020 132162374 - MGP_NODShiLtJ_P0026949 Cpsf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026950.1 MGP_NODShiLtJ_G0017621.1 mouse_genomes_project 10 132156149 132156680 - MGP_NODShiLtJ_P0026950 Cpsf6 protein_coding protein_coding MGP_NODShiLtJ_T0026951.1 MGP_NODShiLtJ_G0017621.1 mouse_genomes_project 10 132159516 132164663 - Cpsf6 protein_coding retained_intron MGP_NODShiLtJ_T0026952.1 MGP_NODShiLtJ_G0017621.1 mouse_genomes_project 10 132170389 132185133 - MGP_NODShiLtJ_P0026952 Cpsf6 protein_coding protein_coding MGP_NODShiLtJ_T0026403.1 MGP_NODShiLtJ_G0017448.1 mouse_genomes_project 10 92310973 92319600 + MGP_NODShiLtJ_P0026403 D10Wsu102e protein_coding protein_coding MGP_NODShiLtJ_T0009553.1 MGP_NODShiLtJ_G0007686.1 mouse_genomes_project 10 144752189 144752258 + Mir6915 miRNA miRNA MGP_NODShiLtJ_T0012287.1 MGP_NODShiLtJ_G0010395.1 mouse_genomes_project 10 46607197 46608202 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026286.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90192735 90202879 - MGP_NODShiLtJ_P0026286 Ncln protein_coding protein_coding MGP_NODShiLtJ_T0026287.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90192943 90202813 - MGP_NODShiLtJ_P0026287 Ncln protein_coding protein_coding MGP_NODShiLtJ_T0026288.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90193584 90194884 - Ncln protein_coding retained_intron MGP_NODShiLtJ_T0026289.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90193776 90194704 - MGP_NODShiLtJ_P0026289 Ncln protein_coding protein_coding MGP_NODShiLtJ_T0026290.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90193826 90195130 - Ncln protein_coding retained_intron MGP_NODShiLtJ_T0026291.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90193866 90195128 - Ncln protein_coding retained_intron MGP_NODShiLtJ_T0026292.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90194712 90196755 - Ncln protein_coding retained_intron MGP_NODShiLtJ_T0026293.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90197411 90198542 - Ncln protein_coding retained_intron MGP_NODShiLtJ_T0026294.1 MGP_NODShiLtJ_G0017422.1 mouse_genomes_project 10 90199809 90202829 - Ncln protein_coding retained_intron MGP_NODShiLtJ_T0024602.1 MGP_NODShiLtJ_G0016955.1 mouse_genomes_project 10 24015894 24103654 + MGP_NODShiLtJ_P0024602 Moxd1 protein_coding protein_coding MGP_NODShiLtJ_T0024603.1 MGP_NODShiLtJ_G0016955.1 mouse_genomes_project 10 24015922 24024098 + Moxd1 protein_coding processed_transcript MGP_NODShiLtJ_T0012305.1 MGP_NODShiLtJ_G0010413.1 mouse_genomes_project 10 83650200 83650624 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026299.1 MGP_NODShiLtJ_G0017425.1 mouse_genomes_project 10 90240947 90258497 - MGP_NODShiLtJ_P0026299 Gna11 protein_coding protein_coding MGP_NODShiLtJ_T0026300.1 MGP_NODShiLtJ_G0017425.1 mouse_genomes_project 10 90242510 90244255 - Gna11 protein_coding retained_intron MGP_NODShiLtJ_T0026301.1 MGP_NODShiLtJ_G0017425.1 mouse_genomes_project 10 90245369 90247370 - Gna11 protein_coding retained_intron MGP_NODShiLtJ_T0024376.1 MGP_NODShiLtJ_G0016883.1 mouse_genomes_project 10 10977231 10981080 + MGP_NODShiLtJ_P0024376 Sf3b5 protein_coding protein_coding MGP_NODShiLtJ_T0026168.1 MGP_NODShiLtJ_G0017394.1 mouse_genomes_project 10 89696228 89712327 - MGP_NODShiLtJ_P0026168 Sgta protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026169.1 MGP_NODShiLtJ_G0017394.1 mouse_genomes_project 10 89696234 89712338 - MGP_NODShiLtJ_P0026169 Sgta protein_coding protein_coding MGP_NODShiLtJ_T0099884.1 MGP_NODShiLtJ_G0038278.1 mouse_genomes_project 10 125072340 125072484 + Gm25117 snoRNA snoRNA MGP_NODShiLtJ_T0026146.1 MGP_NODShiLtJ_G0017384.1 mouse_genomes_project 10 89479774 89491007 - MGP_NODShiLtJ_P0026146 Lingo3 protein_coding protein_coding MGP_NODShiLtJ_T0027271.1 MGP_NODShiLtJ_G0017723.1 mouse_genomes_project 10 144740641 144748854 + Ankrd52 protein_coding retained_intron MGP_NODShiLtJ_T0027272.1 MGP_NODShiLtJ_G0017723.1 mouse_genomes_project 10 144740645 144757364 + MGP_NODShiLtJ_P0027272 Ankrd52 protein_coding protein_coding MGP_NODShiLtJ_T0027273.1 MGP_NODShiLtJ_G0017723.1 mouse_genomes_project 10 144752647 144772088 + MGP_NODShiLtJ_P0027273 Ankrd52 protein_coding protein_coding MGP_NODShiLtJ_T0026769.1 MGP_NODShiLtJ_G0017554.1 mouse_genomes_project 10 111067478 111075529 - MGP_NODShiLtJ_P0026769 protein_coding protein_coding MGP_NODShiLtJ_T0024198.1 MGP_NODShiLtJ_G0016843.1 mouse_genomes_project 10 1243208 1342515 + MGP_NODShiLtJ_P0024198 Akap12 protein_coding protein_coding MGP_NODShiLtJ_T0003006.1 MGP_NODShiLtJ_G0002805.1 mouse_genomes_project 10 84686798 84693420 - Gm15343 antisense antisense MGP_NODShiLtJ_T0024187.1 MGP_NODShiLtJ_G0016841.1 mouse_genomes_project 10 671668 880912 + Plekhg1 protein_coding retained_intron MGP_NODShiLtJ_T0024188.1 MGP_NODShiLtJ_G0016841.1 mouse_genomes_project 10 673263 880856 + Plekhg1 protein_coding retained_intron MGP_NODShiLtJ_T0024189.1 MGP_NODShiLtJ_G0016841.1 mouse_genomes_project 10 805602 909894 + MGP_NODShiLtJ_P0024189 Plekhg1 protein_coding protein_coding MGP_NODShiLtJ_T0024190.1 MGP_NODShiLtJ_G0016841.1 mouse_genomes_project 10 811659 907139 + MGP_NODShiLtJ_P0024190 Plekhg1 protein_coding protein_coding MGP_NODShiLtJ_T0024191.1 MGP_NODShiLtJ_G0016841.1 mouse_genomes_project 10 845200 858513 + Plekhg1 protein_coding retained_intron MGP_NODShiLtJ_T0024192.1 MGP_NODShiLtJ_G0016841.1 mouse_genomes_project 10 845204 909888 + MGP_NODShiLtJ_P0024192 Plekhg1 protein_coding protein_coding MGP_NODShiLtJ_T0024193.1 MGP_NODShiLtJ_G0016841.1 mouse_genomes_project 10 900576 906116 + MGP_NODShiLtJ_P0024193 Plekhg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026724.1 MGP_NODShiLtJ_G0017529.1 mouse_genomes_project 10 104800664 104963529 - MGP_NODShiLtJ_P0026724 Plxnc1 protein_coding protein_coding MGP_NODShiLtJ_T0026725.1 MGP_NODShiLtJ_G0017529.1 mouse_genomes_project 10 104846836 104853444 - Plxnc1 protein_coding retained_intron MGP_NODShiLtJ_T0026726.1 MGP_NODShiLtJ_G0017529.1 mouse_genomes_project 10 104865645 104882242 - MGP_NODShiLtJ_P0026726 Plxnc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026727.1 MGP_NODShiLtJ_G0017529.1 mouse_genomes_project 10 104882023 104939265 - Plxnc1 protein_coding retained_intron MGP_NODShiLtJ_T0097738.1 MGP_NODShiLtJ_G0036150.1 mouse_genomes_project 10 77654953 77658650 - pseudogene pseudogene MGP_NODShiLtJ_T0006090.1 MGP_NODShiLtJ_G0005082.1 mouse_genomes_project 10 125187300 125194821 - 4933440J02Rik lincRNA lincRNA MGP_NODShiLtJ_T0027034.1 MGP_NODShiLtJ_G0017647.1 mouse_genomes_project 10 137072864 137087067 + MGP_NODShiLtJ_P0027034 BC048403 protein_coding protein_coding MGP_NODShiLtJ_T0027035.1 MGP_NODShiLtJ_G0017647.1 mouse_genomes_project 10 137072865 137087080 + MGP_NODShiLtJ_P0027035 BC048403 protein_coding protein_coding MGP_NODShiLtJ_T0027036.1 MGP_NODShiLtJ_G0017647.1 mouse_genomes_project 10 137083854 137085344 + BC048403 protein_coding processed_transcript MGP_NODShiLtJ_T0025351.1 MGP_NODShiLtJ_G0017187.1 mouse_genomes_project 10 75087649 75158708 + MGP_NODShiLtJ_P0025351 Rtkn2 protein_coding protein_coding MGP_NODShiLtJ_T0025352.1 MGP_NODShiLtJ_G0017187.1 mouse_genomes_project 10 75087677 75158704 + MGP_NODShiLtJ_P0025352 Rtkn2 protein_coding protein_coding MGP_NODShiLtJ_T0025353.1 MGP_NODShiLtJ_G0017187.1 mouse_genomes_project 10 75087684 75178468 + MGP_NODShiLtJ_P0025353 Rtkn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025354.1 MGP_NODShiLtJ_G0017187.1 mouse_genomes_project 10 75087777 75178471 + MGP_NODShiLtJ_P0025354 Rtkn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025355.1 MGP_NODShiLtJ_G0017187.1 mouse_genomes_project 10 75087794 75157142 + MGP_NODShiLtJ_P0025355 Rtkn2 protein_coding protein_coding MGP_NODShiLtJ_T0025356.1 MGP_NODShiLtJ_G0017187.1 mouse_genomes_project 10 75158807 75169944 + Rtkn2 protein_coding processed_transcript MGP_NODShiLtJ_T0006032.1 MGP_NODShiLtJ_G0005046.1 mouse_genomes_project 10 67038771 67049392 - Pldi lincRNA lincRNA MGP_NODShiLtJ_T0025724.1 MGP_NODShiLtJ_G0017268.1 mouse_genomes_project 10 86019710 86020583 - MGP_NODShiLtJ_P0025724 protein_coding protein_coding MGP_NODShiLtJ_T0098602.1 MGP_NODShiLtJ_G0036996.1 mouse_genomes_project 10 7760415 7760579 + Gm25682 snRNA snRNA MGP_NODShiLtJ_T0026507.1 MGP_NODShiLtJ_G0017482.1 mouse_genomes_project 10 96850429 96915033 + MGP_NODShiLtJ_P0026507 Pah protein_coding protein_coding MGP_NODShiLtJ_T0026508.1 MGP_NODShiLtJ_G0017482.1 mouse_genomes_project 10 96850564 96914931 + MGP_NODShiLtJ_P0026508 Pah protein_coding protein_coding MGP_NODShiLtJ_T0026509.1 MGP_NODShiLtJ_G0017482.1 mouse_genomes_project 10 96850661 96914752 + MGP_NODShiLtJ_P0026509 Pah protein_coding protein_coding MGP_NODShiLtJ_T0026510.1 MGP_NODShiLtJ_G0017482.1 mouse_genomes_project 10 96875206 96900593 + MGP_NODShiLtJ_P0026510 Pah protein_coding protein_coding MGP_NODShiLtJ_T0026149.1 MGP_NODShiLtJ_G0017387.1 mouse_genomes_project 10 89527730 89547433 + MGP_NODShiLtJ_P0026149 Tmprss9 protein_coding protein_coding MGP_NODShiLtJ_T0098173.1 MGP_NODShiLtJ_G0036585.1 mouse_genomes_project 10 144799650 144799781 + Gm26347 scaRNA scaRNA MGP_NODShiLtJ_T0024436.1 MGP_NODShiLtJ_G0016893.1 mouse_genomes_project 10 12526851 12687403 - MGP_NODShiLtJ_P0024436 Adgrg6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024437.1 MGP_NODShiLtJ_G0016893.1 mouse_genomes_project 10 12526851 12687438 - MGP_NODShiLtJ_P0024437 Adgrg6 protein_coding protein_coding MGP_NODShiLtJ_T0024684.1 MGP_NODShiLtJ_G0016979.1 mouse_genomes_project 10 30819813 30824333 - MGP_NODShiLtJ_P0024684 Cenpw protein_coding protein_coding MGP_NODShiLtJ_T0002965.1 MGP_NODShiLtJ_G0002773.1 mouse_genomes_project 10 12811555 12817307 + Gm16234 antisense antisense MGP_NODShiLtJ_T0026932.1 MGP_NODShiLtJ_G0017609.1 mouse_genomes_project 10 131474197 131608559 - MGP_NODShiLtJ_P0026932 Myrfl protein_coding protein_coding MGP_NODShiLtJ_T0003002.1 MGP_NODShiLtJ_G0002802.1 mouse_genomes_project 10 84392963 84394659 + Gm16240 antisense antisense MGP_NODShiLtJ_T0098639.1 MGP_NODShiLtJ_G0037033.1 mouse_genomes_project 10 95288986 95289090 - Gm24430 snRNA snRNA MGP_NODShiLtJ_T0017013.1 MGP_NODShiLtJ_G0015014.1 mouse_genomes_project 10 143470874 143471966 - Gm4189 processed_transcript processed_transcript MGP_NODShiLtJ_T0017014.1 MGP_NODShiLtJ_G0015014.1 mouse_genomes_project 10 143470874 143471903 - Gm4189 processed_transcript retained_intron MGP_NODShiLtJ_T0026748.1 MGP_NODShiLtJ_G0017542.1 mouse_genomes_project 10 108014847 108068743 + MGP_NODShiLtJ_P0026748 Epyc protein_coding protein_coding MGP_NODShiLtJ_T0026749.1 MGP_NODShiLtJ_G0017542.1 mouse_genomes_project 10 108017750 108069297 + MGP_NODShiLtJ_P0026749 Epyc protein_coding protein_coding MGP_NODShiLtJ_T0025930.1 MGP_NODShiLtJ_G0017335.1 mouse_genomes_project 10 88514808 88521277 + MGP_NODShiLtJ_P0025930 Grin3b protein_coding protein_coding MGP_NODShiLtJ_T0025931.1 MGP_NODShiLtJ_G0017335.1 mouse_genomes_project 10 88517823 88520802 + MGP_NODShiLtJ_P0025931 Grin3b protein_coding protein_coding MGP_NODShiLtJ_T0025932.1 MGP_NODShiLtJ_G0017335.1 mouse_genomes_project 10 88518495 88521211 + MGP_NODShiLtJ_P0025932 Grin3b protein_coding protein_coding MGP_NODShiLtJ_T0024438.1 MGP_NODShiLtJ_G0016894.1 mouse_genomes_project 10 12800575 12862212 - MGP_NODShiLtJ_P0024438 Vta1 protein_coding protein_coding MGP_NODShiLtJ_T0024439.1 MGP_NODShiLtJ_G0016894.1 mouse_genomes_project 10 12801175 12862152 - MGP_NODShiLtJ_P0024439 Vta1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024440.1 MGP_NODShiLtJ_G0016894.1 mouse_genomes_project 10 12801483 12817250 - Vta1 protein_coding retained_intron MGP_NODShiLtJ_T0024441.1 MGP_NODShiLtJ_G0016894.1 mouse_genomes_project 10 12801608 12862111 - MGP_NODShiLtJ_P0024441 Vta1 protein_coding protein_coding MGP_NODShiLtJ_T0024442.1 MGP_NODShiLtJ_G0016894.1 mouse_genomes_project 10 12801659 12836532 - MGP_NODShiLtJ_P0024442 Vta1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024443.1 MGP_NODShiLtJ_G0016894.1 mouse_genomes_project 10 12837327 12862117 - Vta1 protein_coding processed_transcript MGP_NODShiLtJ_T0012315.1 MGP_NODShiLtJ_G0010423.1 mouse_genomes_project 10 103590474 103590937 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027211.1 MGP_NODShiLtJ_G0017705.1 mouse_genomes_project 10 144283373 144300091 + MGP_NODShiLtJ_P0027211 Prim1 protein_coding protein_coding MGP_NODShiLtJ_T0027212.1 MGP_NODShiLtJ_G0017705.1 mouse_genomes_project 10 144283377 144300145 + MGP_NODShiLtJ_P0027212 Prim1 protein_coding protein_coding MGP_NODShiLtJ_T0027213.1 MGP_NODShiLtJ_G0017705.1 mouse_genomes_project 10 144283401 144299973 + Prim1 protein_coding retained_intron MGP_NODShiLtJ_T0027214.1 MGP_NODShiLtJ_G0017705.1 mouse_genomes_project 10 144288753 144290913 + Prim1 protein_coding retained_intron MGP_NODShiLtJ_T0027215.1 MGP_NODShiLtJ_G0017705.1 mouse_genomes_project 10 144296794 144300141 + Prim1 protein_coding retained_intron MGP_NODShiLtJ_T0027190.1 MGP_NODShiLtJ_G0017692.1 mouse_genomes_project 10 143938632 143956043 + MGP_NODShiLtJ_P0027190 Myo1a protein_coding protein_coding MGP_NODShiLtJ_T0027191.1 MGP_NODShiLtJ_G0017692.1 mouse_genomes_project 10 143938718 143968260 + MGP_NODShiLtJ_P0027191 Myo1a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024598.1 MGP_NODShiLtJ_G0016951.1 mouse_genomes_project 10 23762664 23763290 + MGP_NODShiLtJ_P0024598 protein_coding protein_coding MGP_NODShiLtJ_T0009492.1 MGP_NODShiLtJ_G0007625.1 mouse_genomes_project 10 56982651 56982788 + Gm24084 miRNA miRNA MGP_NODShiLtJ_T0012288.1 MGP_NODShiLtJ_G0010396.1 mouse_genomes_project 10 47914104 47915769 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003027.1 MGP_NODShiLtJ_G0002822.1 mouse_genomes_project 10 96274710 96337769 + Gm16271 antisense antisense MGP_NODShiLtJ_T0024812.1 MGP_NODShiLtJ_G0017034.1 mouse_genomes_project 10 43741426 43857318 - MGP_NODShiLtJ_P0024812 Fig4 protein_coding protein_coding MGP_NODShiLtJ_T0025097.1 MGP_NODShiLtJ_G0017122.1 mouse_genomes_project 10 65954599 65956695 - MGP_NODShiLtJ_P0025097 Ddit4 protein_coding protein_coding MGP_NODShiLtJ_T0025725.1 MGP_NODShiLtJ_G0017269.1 mouse_genomes_project 10 86059462 86060902 - MGP_NODShiLtJ_P0025725 protein_coding protein_coding MGP_NODShiLtJ_T0000815.1 MGP_NODShiLtJ_G0000745.1 mouse_genomes_project 10 135458722 135461218 + TEC TEC MGP_NODShiLtJ_T0002961.1 MGP_NODShiLtJ_G0002770.1 mouse_genomes_project 10 5232374 5233461 + B430219N15Rik antisense antisense MGP_NODShiLtJ_T0002962.1 MGP_NODShiLtJ_G0002770.1 mouse_genomes_project 10 5232439 5233532 + B430219N15Rik antisense antisense MGP_NODShiLtJ_T0099833.1 MGP_NODShiLtJ_G0038227.1 mouse_genomes_project 10 8409690 8409821 + Gm23601 snoRNA snoRNA MGP_NODShiLtJ_T0024403.1 MGP_NODShiLtJ_G0016886.1 mouse_genomes_project 10 11168622 11186827 - MGP_NODShiLtJ_P0024403 Ltv1 protein_coding protein_coding MGP_NODShiLtJ_T0024404.1 MGP_NODShiLtJ_G0016886.1 mouse_genomes_project 10 11168868 11185284 - MGP_NODShiLtJ_P0024404 Ltv1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009523.1 MGP_NODShiLtJ_G0007656.1 mouse_genomes_project 10 94483205 94483309 + Gm25281 miRNA miRNA MGP_NODShiLtJ_T0099850.1 MGP_NODShiLtJ_G0038244.1 mouse_genomes_project 10 40412023 40412091 + Gm24297 snoRNA snoRNA MGP_NODShiLtJ_T0012314.1 MGP_NODShiLtJ_G0010422.1 mouse_genomes_project 10 96304823 96305232 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024881.1 MGP_NODShiLtJ_G0017048.1 mouse_genomes_project 10 44948524 45135883 - MGP_NODShiLtJ_P0024881 Lace1 protein_coding protein_coding MGP_NODShiLtJ_T0024882.1 MGP_NODShiLtJ_G0017048.1 mouse_genomes_project 10 44948532 45135897 - MGP_NODShiLtJ_P0024882 Lace1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024883.1 MGP_NODShiLtJ_G0017048.1 mouse_genomes_project 10 44949526 45072558 - MGP_NODShiLtJ_P0024883 Lace1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024776.1 MGP_NODShiLtJ_G0017017.1 mouse_genomes_project 10 42090954 42255812 + MGP_NODShiLtJ_P0024776 protein_coding protein_coding MGP_NODShiLtJ_T0024777.1 MGP_NODShiLtJ_G0017017.1 mouse_genomes_project 10 42090963 42255769 + MGP_NODShiLtJ_P0024777 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024778.1 MGP_NODShiLtJ_G0017017.1 mouse_genomes_project 10 42091200 42255807 + MGP_NODShiLtJ_P0024778 protein_coding protein_coding MGP_NODShiLtJ_T0024779.1 MGP_NODShiLtJ_G0017017.1 mouse_genomes_project 10 42203767 42255809 + MGP_NODShiLtJ_P0024779 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024780.1 MGP_NODShiLtJ_G0017017.1 mouse_genomes_project 10 42206910 42222919 + protein_coding retained_intron MGP_NODShiLtJ_T0024781.1 MGP_NODShiLtJ_G0017017.1 mouse_genomes_project 10 42239020 42243571 + protein_coding retained_intron MGP_NODShiLtJ_T0024782.1 MGP_NODShiLtJ_G0017017.1 mouse_genomes_project 10 42247709 42255089 + protein_coding retained_intron MGP_NODShiLtJ_T0027373.1 MGP_NODShiLtJ_G0017770.1 mouse_genomes_project 10 145899021 145899960 + MGP_NODShiLtJ_P0027373 Gm44444 protein_coding protein_coding MGP_NODShiLtJ_T0011170.1 MGP_NODShiLtJ_G0009303.1 mouse_genomes_project 10 101910688 101910891 - Gm27753 misc_RNA misc_RNA MGP_NODShiLtJ_T0027219.1 MGP_NODShiLtJ_G0017707.1 mouse_genomes_project 10 144346531 144349634 + Ptges3 protein_coding retained_intron MGP_NODShiLtJ_T0027220.1 MGP_NODShiLtJ_G0017707.1 mouse_genomes_project 10 144347297 144353313 + MGP_NODShiLtJ_P0027220 Ptges3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025448.1 MGP_NODShiLtJ_G0017201.1 mouse_genomes_project 10 78670096 78683144 - MGP_NODShiLtJ_P0025448 Tfam protein_coding protein_coding MGP_NODShiLtJ_T0025449.1 MGP_NODShiLtJ_G0017201.1 mouse_genomes_project 10 78673089 78680523 - Tfam protein_coding processed_transcript MGP_NODShiLtJ_T0025450.1 MGP_NODShiLtJ_G0017201.1 mouse_genomes_project 10 78673100 78683484 - MGP_NODShiLtJ_P0025450 Tfam protein_coding protein_coding MGP_NODShiLtJ_T0025451.1 MGP_NODShiLtJ_G0017201.1 mouse_genomes_project 10 78673759 78682247 - MGP_NODShiLtJ_P0025451 Tfam protein_coding protein_coding MGP_NODShiLtJ_T0025430.1 MGP_NODShiLtJ_G0017196.1 mouse_genomes_project 10 77610678 77656434 + MGP_NODShiLtJ_P0025430 Slc16a9 protein_coding protein_coding MGP_NODShiLtJ_T0025431.1 MGP_NODShiLtJ_G0017196.1 mouse_genomes_project 10 77635490 77653493 + Slc16a9 protein_coding retained_intron MGP_NODShiLtJ_T0025184.1 MGP_NODShiLtJ_G0017147.1 mouse_genomes_project 10 67925373 67953260 + MGP_NODShiLtJ_P0025184 Aifm2 protein_coding protein_coding MGP_NODShiLtJ_T0025185.1 MGP_NODShiLtJ_G0017147.1 mouse_genomes_project 10 67925397 67942528 + Aifm2 protein_coding retained_intron MGP_NODShiLtJ_T0025186.1 MGP_NODShiLtJ_G0017147.1 mouse_genomes_project 10 67925421 67953867 + MGP_NODShiLtJ_P0025186 Aifm2 protein_coding protein_coding MGP_NODShiLtJ_T0025187.1 MGP_NODShiLtJ_G0017147.1 mouse_genomes_project 10 67925433 67953254 + MGP_NODShiLtJ_P0025187 Aifm2 protein_coding protein_coding MGP_NODShiLtJ_T0025188.1 MGP_NODShiLtJ_G0017147.1 mouse_genomes_project 10 67925442 67926346 + Aifm2 protein_coding processed_transcript MGP_NODShiLtJ_T0025189.1 MGP_NODShiLtJ_G0017147.1 mouse_genomes_project 10 67934097 67953260 + MGP_NODShiLtJ_P0025189 Aifm2 protein_coding protein_coding MGP_NODShiLtJ_T0025190.1 MGP_NODShiLtJ_G0017147.1 mouse_genomes_project 10 67942754 67949177 + Aifm2 protein_coding retained_intron MGP_NODShiLtJ_T0099857.1 MGP_NODShiLtJ_G0038251.1 mouse_genomes_project 10 52293225 52293354 + Gm23584 snoRNA snoRNA MGP_NODShiLtJ_T0026629.1 MGP_NODShiLtJ_G0017506.1 mouse_genomes_project 10 100815562 100839089 + MGP_NODShiLtJ_P0026629 Ikbip protein_coding protein_coding MGP_NODShiLtJ_T0026630.1 MGP_NODShiLtJ_G0017506.1 mouse_genomes_project 10 100815679 100834721 + MGP_NODShiLtJ_P0026630 Ikbip protein_coding protein_coding MGP_NODShiLtJ_T0026631.1 MGP_NODShiLtJ_G0017506.1 mouse_genomes_project 10 100815728 100829287 + Ikbip protein_coding processed_transcript MGP_NODShiLtJ_T0026632.1 MGP_NODShiLtJ_G0017506.1 mouse_genomes_project 10 100815742 100829870 + Ikbip protein_coding retained_intron MGP_NODShiLtJ_T0026633.1 MGP_NODShiLtJ_G0017506.1 mouse_genomes_project 10 100832023 100838577 + Ikbip protein_coding processed_transcript MGP_NODShiLtJ_T0024314.1 MGP_NODShiLtJ_G0016865.1 mouse_genomes_project 10 5220027 5233089 - MGP_NODShiLtJ_P0024314 Ginm1 protein_coding protein_coding MGP_NODShiLtJ_T0024315.1 MGP_NODShiLtJ_G0016865.1 mouse_genomes_project 10 5220030 5222617 - Ginm1 protein_coding retained_intron MGP_NODShiLtJ_T0024316.1 MGP_NODShiLtJ_G0016865.1 mouse_genomes_project 10 5220036 5233063 - MGP_NODShiLtJ_P0024316 Ginm1 protein_coding protein_coding MGP_NODShiLtJ_T0024317.1 MGP_NODShiLtJ_G0016865.1 mouse_genomes_project 10 5231492 5246006 - Ginm1 protein_coding processed_transcript MGP_NODShiLtJ_T0024318.1 MGP_NODShiLtJ_G0016865.1 mouse_genomes_project 10 5244627 5246030 - Ginm1 protein_coding processed_transcript MGP_NODShiLtJ_T0024319.1 MGP_NODShiLtJ_G0016865.1 mouse_genomes_project 10 5245728 5246028 - MGP_NODShiLtJ_P0024319 Ginm1 protein_coding protein_coding MGP_NODShiLtJ_T0026806.1 MGP_NODShiLtJ_G0017565.1 mouse_genomes_project 10 115249140 115321985 + MGP_NODShiLtJ_P0026806 Slc6a15 protein_coding protein_coding MGP_NODShiLtJ_T0026807.1 MGP_NODShiLtJ_G0017565.1 mouse_genomes_project 10 115249140 115321985 + MGP_NODShiLtJ_P0026807 Slc6a15 protein_coding protein_coding MGP_NODShiLtJ_T0098627.1 MGP_NODShiLtJ_G0037021.1 mouse_genomes_project 10 69216161 69216267 - Gm26479 snRNA snRNA MGP_NODShiLtJ_T0024550.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21300212 21421775 + MGP_NODShiLtJ_P0024550 Sgk1 protein_coding protein_coding MGP_NODShiLtJ_T0024551.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21300397 21317140 + Sgk1 protein_coding processed_transcript MGP_NODShiLtJ_T0024552.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21347336 21412338 + MGP_NODShiLtJ_P0024552 Sgk1 protein_coding protein_coding MGP_NODShiLtJ_T0024553.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21400427 21417775 + MGP_NODShiLtJ_P0024553 Sgk1 protein_coding protein_coding MGP_NODShiLtJ_T0024554.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21414156 21421780 + MGP_NODShiLtJ_P0024554 Sgk1 protein_coding protein_coding MGP_NODShiLtJ_T0024555.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21414156 21417756 + MGP_NODShiLtJ_P0024555 Sgk1 protein_coding protein_coding MGP_NODShiLtJ_T0024556.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21415776 21421773 + MGP_NODShiLtJ_P0024556 Sgk1 protein_coding protein_coding MGP_NODShiLtJ_T0024557.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21416569 21417483 + Sgk1 protein_coding retained_intron MGP_NODShiLtJ_T0024558.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21416577 21421784 + MGP_NODShiLtJ_P0024558 Sgk1 protein_coding protein_coding MGP_NODShiLtJ_T0024559.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21416597 21418223 + Sgk1 protein_coding retained_intron MGP_NODShiLtJ_T0024560.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21416796 21419318 + MGP_NODShiLtJ_P0024560 Sgk1 protein_coding protein_coding MGP_NODShiLtJ_T0024561.1 MGP_NODShiLtJ_G0016929.1 mouse_genomes_project 10 21418472 21420122 + Sgk1 protein_coding retained_intron MGP_NODShiLtJ_T0101029.1 MGP_NODShiLtJ_G0039407.1 mouse_genomes_project 10 8324351 8334719 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101030.1 MGP_NODShiLtJ_G0039407.1 mouse_genomes_project 10 8331456 8332453 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0012322.1 MGP_NODShiLtJ_G0010430.1 mouse_genomes_project 10 115523627 115524623 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097876.1 MGP_NODShiLtJ_G0036288.1 mouse_genomes_project 10 877062 877171 - Gm23023 rRNA rRNA MGP_NODShiLtJ_T0098640.1 MGP_NODShiLtJ_G0037034.1 mouse_genomes_project 10 96677449 96677556 - Gm23191 snRNA snRNA MGP_NODShiLtJ_T0024185.1 MGP_NODShiLtJ_G0016840.1 mouse_genomes_project 10 457342 471853 + MGP_NODShiLtJ_P0024185 Iyd protein_coding protein_coding MGP_NODShiLtJ_T0024186.1 MGP_NODShiLtJ_G0016840.1 mouse_genomes_project 10 457390 469082 + Iyd protein_coding retained_intron MGP_NODShiLtJ_T0027195.1 MGP_NODShiLtJ_G0017695.1 mouse_genomes_project 10 143984849 143989304 - MGP_NODShiLtJ_P0027195 Gpr182 protein_coding protein_coding MGP_NODShiLtJ_T0098642.1 MGP_NODShiLtJ_G0037036.1 mouse_genomes_project 10 99438313 99438420 - Gm26180 snRNA snRNA MGP_NODShiLtJ_T0025924.1 MGP_NODShiLtJ_G0017333.1 mouse_genomes_project 10 88465709 88496457 + MGP_NODShiLtJ_P0025924 Arid3a protein_coding protein_coding MGP_NODShiLtJ_T0025925.1 MGP_NODShiLtJ_G0017333.1 mouse_genomes_project 10 88465805 88496150 + MGP_NODShiLtJ_P0025925 Arid3a protein_coding protein_coding MGP_NODShiLtJ_T0025926.1 MGP_NODShiLtJ_G0017333.1 mouse_genomes_project 10 88466007 88496142 + MGP_NODShiLtJ_P0025926 Arid3a protein_coding protein_coding MGP_NODShiLtJ_T0025927.1 MGP_NODShiLtJ_G0017333.1 mouse_genomes_project 10 88468957 88469752 + MGP_NODShiLtJ_P0025927 Arid3a protein_coding protein_coding MGP_NODShiLtJ_T0025928.1 MGP_NODShiLtJ_G0017333.1 mouse_genomes_project 10 88487783 88494082 + Arid3a protein_coding processed_transcript MGP_NODShiLtJ_T0024530.1 MGP_NODShiLtJ_G0016922.1 mouse_genomes_project 10 19678528 20037197 - MGP_NODShiLtJ_P0024530 Pde7b protein_coding protein_coding MGP_NODShiLtJ_T0024531.1 MGP_NODShiLtJ_G0016922.1 mouse_genomes_project 10 19679452 19838927 - MGP_NODShiLtJ_P0024531 Pde7b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024532.1 MGP_NODShiLtJ_G0016922.1 mouse_genomes_project 10 19680942 20036815 - MGP_NODShiLtJ_P0024532 Pde7b protein_coding protein_coding MGP_NODShiLtJ_T0024533.1 MGP_NODShiLtJ_G0016922.1 mouse_genomes_project 10 19680942 19838927 - MGP_NODShiLtJ_P0024533 Pde7b protein_coding protein_coding MGP_NODShiLtJ_T0024534.1 MGP_NODShiLtJ_G0016922.1 mouse_genomes_project 10 19687529 19839069 - MGP_NODShiLtJ_P0024534 Pde7b protein_coding protein_coding MGP_NODShiLtJ_T0024535.1 MGP_NODShiLtJ_G0016922.1 mouse_genomes_project 10 19768311 20037151 - Pde7b protein_coding retained_intron MGP_NODShiLtJ_T0024536.1 MGP_NODShiLtJ_G0016922.1 mouse_genomes_project 10 19919791 20037151 - Pde7b protein_coding retained_intron MGP_NODShiLtJ_T0026443.1 MGP_NODShiLtJ_G0017460.1 mouse_genomes_project 10 94220045 94251100 + MGP_NODShiLtJ_P0026443 Tmem263 protein_coding protein_coding MGP_NODShiLtJ_T0099854.1 MGP_NODShiLtJ_G0038248.1 mouse_genomes_project 10 43762302 43762434 + Gm25526 snoRNA snoRNA MGP_NODShiLtJ_T0026933.1 MGP_NODShiLtJ_G0017610.1 mouse_genomes_project 10 131618700 131664897 - MGP_NODShiLtJ_P0026933 Rab3ip protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026934.1 MGP_NODShiLtJ_G0017610.1 mouse_genomes_project 10 131618707 131664880 - MGP_NODShiLtJ_P0026934 Rab3ip protein_coding protein_coding MGP_NODShiLtJ_T0006038.1 MGP_NODShiLtJ_G0005052.1 mouse_genomes_project 10 73044982 73048421 - 1700023F02Rik lincRNA lincRNA MGP_NODShiLtJ_T0006039.1 MGP_NODShiLtJ_G0005052.1 mouse_genomes_project 10 73044982 73199870 - 1700023F02Rik lincRNA lincRNA MGP_NODShiLtJ_T0006040.1 MGP_NODShiLtJ_G0005052.1 mouse_genomes_project 10 73044986 73048442 - 1700023F02Rik lincRNA lincRNA MGP_NODShiLtJ_T0006041.1 MGP_NODShiLtJ_G0005052.1 mouse_genomes_project 10 73044986 73048435 - 1700023F02Rik lincRNA lincRNA MGP_NODShiLtJ_T0006042.1 MGP_NODShiLtJ_G0005052.1 mouse_genomes_project 10 73045053 73047447 - 1700023F02Rik lincRNA lincRNA MGP_NODShiLtJ_T0024918.1 MGP_NODShiLtJ_G0017057.1 mouse_genomes_project 10 46243746 46283081 + MGP_NODShiLtJ_P0024918 Bend3 protein_coding protein_coding MGP_NODShiLtJ_T0024919.1 MGP_NODShiLtJ_G0017057.1 mouse_genomes_project 10 46243746 46281134 + MGP_NODShiLtJ_P0024919 Bend3 protein_coding protein_coding MGP_NODShiLtJ_T0003010.1 MGP_NODShiLtJ_G0002809.1 mouse_genomes_project 10 89408251 89410399 - Gm17151 antisense antisense MGP_NODShiLtJ_T0024377.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11044349 11115213 + MGP_NODShiLtJ_P0024377 Plagl1 protein_coding protein_coding MGP_NODShiLtJ_T0024378.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076245 11112719 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024379.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076266 11112874 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024380.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076342 11112758 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024381.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076342 11119495 + MGP_NODShiLtJ_P0024381 Plagl1 protein_coding protein_coding MGP_NODShiLtJ_T0024382.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11102052 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024383.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11104566 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024384.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11104625 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024385.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11104548 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024386.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11104608 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024387.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11112839 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024388.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11095591 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024389.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11104564 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024390.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11093063 + Plagl1 protein_coding retained_intron MGP_NODShiLtJ_T0024391.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11112776 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024392.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11112758 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024393.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11100391 + Plagl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024394.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076386 11118956 + MGP_NODShiLtJ_P0024394 Plagl1 protein_coding protein_coding MGP_NODShiLtJ_T0024395.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076389 11118943 + MGP_NODShiLtJ_P0024395 Plagl1 protein_coding protein_coding MGP_NODShiLtJ_T0024396.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076395 11101287 + Plagl1 protein_coding retained_intron MGP_NODShiLtJ_T0024397.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076428 11100627 + Plagl1 protein_coding retained_intron MGP_NODShiLtJ_T0024398.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076428 11100727 + Plagl1 protein_coding retained_intron MGP_NODShiLtJ_T0024399.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11076567 11112889 + MGP_NODShiLtJ_P0024399 Plagl1 protein_coding protein_coding MGP_NODShiLtJ_T0024400.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11101307 11115200 + MGP_NODShiLtJ_P0024400 Plagl1 protein_coding protein_coding MGP_NODShiLtJ_T0024401.1 MGP_NODShiLtJ_G0016884.1 mouse_genomes_project 10 11104208 11112926 + MGP_NODShiLtJ_P0024401 Plagl1 protein_coding protein_coding MGP_NODShiLtJ_T0024325.1 MGP_NODShiLtJ_G0016868.1 mouse_genomes_project 10 5370982 5428736 - MGP_NODShiLtJ_P0024325 Tab2 protein_coding protein_coding MGP_NODShiLtJ_T0024326.1 MGP_NODShiLtJ_G0016868.1 mouse_genomes_project 10 5372658 5375797 - Tab2 protein_coding retained_intron MGP_NODShiLtJ_T0024327.1 MGP_NODShiLtJ_G0016868.1 mouse_genomes_project 10 5372768 5376783 - Tab2 protein_coding retained_intron MGP_NODShiLtJ_T0024328.1 MGP_NODShiLtJ_G0016868.1 mouse_genomes_project 10 5376788 5399663 - MGP_NODShiLtJ_P0024328 Tab2 protein_coding protein_coding MGP_NODShiLtJ_T0024329.1 MGP_NODShiLtJ_G0016868.1 mouse_genomes_project 10 5384669 5390684 - MGP_NODShiLtJ_P0024329 Tab2 protein_coding protein_coding MGP_NODShiLtJ_T0098637.1 MGP_NODShiLtJ_G0037031.1 mouse_genomes_project 10 93693844 93693939 + Gm25657 snRNA snRNA MGP_NODShiLtJ_T0099868.1 MGP_NODShiLtJ_G0038262.1 mouse_genomes_project 10 86174743 86174819 - Gm22394 snoRNA snoRNA MGP_NODShiLtJ_T0025014.1 MGP_NODShiLtJ_G0017096.1 mouse_genomes_project 10 61687100 61697643 + MGP_NODShiLtJ_P0025014 Msl3l2 protein_coding protein_coding MGP_NODShiLtJ_T0024331.1 MGP_NODShiLtJ_G0016870.1 mouse_genomes_project 10 6252091 6423826 - MGP_NODShiLtJ_P0024331 Sash1 protein_coding protein_coding MGP_NODShiLtJ_T0027100.1 MGP_NODShiLtJ_G0017667.1 mouse_genomes_project 10 143247220 143262617 + MGP_NODShiLtJ_P0027100 Agap2 protein_coding protein_coding MGP_NODShiLtJ_T0026106.1 MGP_NODShiLtJ_G0017371.1 mouse_genomes_project 10 89230349 89243238 + MGP_NODShiLtJ_P0026106 Scamp4 protein_coding protein_coding MGP_NODShiLtJ_T0026107.1 MGP_NODShiLtJ_G0017371.1 mouse_genomes_project 10 89230720 89242418 + MGP_NODShiLtJ_P0026107 Scamp4 protein_coding protein_coding MGP_NODShiLtJ_T0027413.1 MGP_NODShiLtJ_G0017801.1 mouse_genomes_project 10 146726716 146727649 + MGP_NODShiLtJ_P0027413 Olfr821 protein_coding protein_coding MGP_NODShiLtJ_T0026873.1 MGP_NODShiLtJ_G0017588.1 mouse_genomes_project 10 125730959 125753480 + MGP_NODShiLtJ_P0026873 Glipr1l1 protein_coding protein_coding MGP_NODShiLtJ_T0027101.1 MGP_NODShiLtJ_G0017668.1 mouse_genomes_project 10 143263706 143295273 - MGP_NODShiLtJ_P0027101 Os9 protein_coding protein_coding MGP_NODShiLtJ_T0027102.1 MGP_NODShiLtJ_G0017668.1 mouse_genomes_project 10 143263706 143295273 - MGP_NODShiLtJ_P0027102 Os9 protein_coding protein_coding MGP_NODShiLtJ_T0002995.1 MGP_NODShiLtJ_G0002796.1 mouse_genomes_project 10 75137843 75139590 - antisense antisense MGP_NODShiLtJ_T0002996.1 MGP_NODShiLtJ_G0002796.1 mouse_genomes_project 10 75138420 75139917 - antisense antisense MGP_NODShiLtJ_T0026029.1 MGP_NODShiLtJ_G0017353.1 mouse_genomes_project 10 88832380 88852657 + MGP_NODShiLtJ_P0026029 Dazap1 protein_coding protein_coding MGP_NODShiLtJ_T0026030.1 MGP_NODShiLtJ_G0017353.1 mouse_genomes_project 10 88835878 88860761 + MGP_NODShiLtJ_P0026030 Dazap1 protein_coding protein_coding MGP_NODShiLtJ_T0026031.1 MGP_NODShiLtJ_G0017353.1 mouse_genomes_project 10 88835910 88860246 + MGP_NODShiLtJ_P0026031 Dazap1 protein_coding protein_coding MGP_NODShiLtJ_T0026032.1 MGP_NODShiLtJ_G0017353.1 mouse_genomes_project 10 88835968 88860761 + MGP_NODShiLtJ_P0026032 Dazap1 protein_coding protein_coding MGP_NODShiLtJ_T0026033.1 MGP_NODShiLtJ_G0017353.1 mouse_genomes_project 10 88836018 88850081 + Dazap1 protein_coding processed_transcript MGP_NODShiLtJ_T0026034.1 MGP_NODShiLtJ_G0017353.1 mouse_genomes_project 10 88852074 88857087 + Dazap1 protein_coding retained_intron MGP_NODShiLtJ_T0026035.1 MGP_NODShiLtJ_G0017353.1 mouse_genomes_project 10 88854518 88856173 + Dazap1 protein_coding retained_intron MGP_NODShiLtJ_T0027328.1 MGP_NODShiLtJ_G0017744.1 mouse_genomes_project 10 145211446 145215781 - MGP_NODShiLtJ_P0027328 Tmem198b protein_coding protein_coding MGP_NODShiLtJ_T0027329.1 MGP_NODShiLtJ_G0017744.1 mouse_genomes_project 10 145211515 145215372 - MGP_NODShiLtJ_P0027329 Tmem198b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027330.1 MGP_NODShiLtJ_G0017744.1 mouse_genomes_project 10 145212251 145215128 - MGP_NODShiLtJ_P0027330 Tmem198b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003011.1 MGP_NODShiLtJ_G0002810.1 mouse_genomes_project 10 89677166 89678628 + Gm16099 antisense antisense MGP_NODShiLtJ_T0003012.1 MGP_NODShiLtJ_G0002810.1 mouse_genomes_project 10 89677438 89678922 + Gm16099 antisense antisense MGP_NODShiLtJ_T0025873.1 MGP_NODShiLtJ_G0017321.1 mouse_genomes_project 10 88306951 88313994 - MGP_NODShiLtJ_P0025873 Prss57 protein_coding protein_coding MGP_NODShiLtJ_T0025874.1 MGP_NODShiLtJ_G0017321.1 mouse_genomes_project 10 88306953 88315970 - MGP_NODShiLtJ_P0025874 Prss57 protein_coding protein_coding MGP_NODShiLtJ_T0025875.1 MGP_NODShiLtJ_G0017321.1 mouse_genomes_project 10 88308395 88309949 - MGP_NODShiLtJ_P0025875 Prss57 protein_coding protein_coding MGP_NODShiLtJ_T0025876.1 MGP_NODShiLtJ_G0017321.1 mouse_genomes_project 10 88308573 88309967 - MGP_NODShiLtJ_P0025876 Prss57 protein_coding protein_coding MGP_NODShiLtJ_T0024604.1 MGP_NODShiLtJ_G0016956.1 mouse_genomes_project 10 24437599 24440838 + MGP_NODShiLtJ_P0024604 Ctgf protein_coding protein_coding MGP_NODShiLtJ_T0024605.1 MGP_NODShiLtJ_G0016956.1 mouse_genomes_project 10 24437883 24440841 + MGP_NODShiLtJ_P0024605 Ctgf protein_coding protein_coding MGP_NODShiLtJ_T0024606.1 MGP_NODShiLtJ_G0016956.1 mouse_genomes_project 10 24437937 24438530 + MGP_NODShiLtJ_P0024606 Ctgf protein_coding protein_coding MGP_NODShiLtJ_T0009521.1 MGP_NODShiLtJ_G0007654.1 mouse_genomes_project 10 90211108 90211205 + Gm25595 miRNA miRNA MGP_NODShiLtJ_T0024369.1 MGP_NODShiLtJ_G0016880.1 mouse_genomes_project 10 9181415 9304872 + MGP_NODShiLtJ_P0024369 Epm2a protein_coding protein_coding MGP_NODShiLtJ_T0024370.1 MGP_NODShiLtJ_G0016880.1 mouse_genomes_project 10 9181467 9292911 + Epm2a protein_coding processed_transcript MGP_NODShiLtJ_T0027090.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143223113 143232240 + MGP_NODShiLtJ_P0027090 Cdk4 protein_coding protein_coding MGP_NODShiLtJ_T0027091.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143223182 143227114 + MGP_NODShiLtJ_P0027091 Cdk4 protein_coding protein_coding MGP_NODShiLtJ_T0027092.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143223183 143226289 + MGP_NODShiLtJ_P0027092 Cdk4 protein_coding protein_coding MGP_NODShiLtJ_T0027093.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143223188 143227114 + MGP_NODShiLtJ_P0027093 Cdk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027094.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143223193 143231617 + Cdk4 protein_coding retained_intron MGP_NODShiLtJ_T0027095.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143223195 143225392 + Cdk4 protein_coding retained_intron MGP_NODShiLtJ_T0027096.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143223447 143226343 + MGP_NODShiLtJ_P0027096 Cdk4 protein_coding protein_coding MGP_NODShiLtJ_T0027097.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143223877 143225427 + Cdk4 protein_coding retained_intron MGP_NODShiLtJ_T0027098.1 MGP_NODShiLtJ_G0017665.1 mouse_genomes_project 10 143226187 143231555 + Cdk4 protein_coding retained_intron MGP_NODShiLtJ_T0027268.1 MGP_NODShiLtJ_G0017720.1 mouse_genomes_project 10 144652913 144657642 + MGP_NODShiLtJ_P0027268 Cnpy2 protein_coding protein_coding MGP_NODShiLtJ_T0025244.1 MGP_NODShiLtJ_G0017159.1 mouse_genomes_project 10 68731176 68767132 - MGP_NODShiLtJ_P0025244 Vps26a protein_coding protein_coding MGP_NODShiLtJ_T0025245.1 MGP_NODShiLtJ_G0017159.1 mouse_genomes_project 10 68731176 68766925 - MGP_NODShiLtJ_P0025245 Vps26a protein_coding protein_coding MGP_NODShiLtJ_T0024724.1 MGP_NODShiLtJ_G0017004.1 mouse_genomes_project 10 35677025 35680900 + MGP_NODShiLtJ_P0024724 Tspyl4 protein_coding protein_coding MGP_NODShiLtJ_T0024671.1 MGP_NODShiLtJ_G0016973.1 mouse_genomes_project 10 29603987 29604900 - MGP_NODShiLtJ_P0024671 Gm9996 protein_coding protein_coding MGP_NODShiLtJ_T0025789.1 MGP_NODShiLtJ_G0017283.1 mouse_genomes_project 10 86720593 86733245 - MGP_NODShiLtJ_P0025789 Rrp1 protein_coding protein_coding MGP_NODShiLtJ_T0024710.1 MGP_NODShiLtJ_G0016992.1 mouse_genomes_project 10 35175836 35199131 + MGP_NODShiLtJ_P0024710 Sult3a1 protein_coding protein_coding MGP_NODShiLtJ_T0099881.1 MGP_NODShiLtJ_G0038275.1 mouse_genomes_project 10 121496929 121497063 + Gm23105 snoRNA snoRNA MGP_NODShiLtJ_T0012277.1 MGP_NODShiLtJ_G0010385.1 mouse_genomes_project 10 26734584 26735596 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006060.1 MGP_NODShiLtJ_G0005067.1 mouse_genomes_project 10 95970633 95979920 + lincRNA lincRNA MGP_NODShiLtJ_T0026679.1 MGP_NODShiLtJ_G0017519.1 mouse_genomes_project 10 103564095 103569429 + MGP_NODShiLtJ_P0026679 Ntn4 protein_coding protein_coding MGP_NODShiLtJ_T0026680.1 MGP_NODShiLtJ_G0017519.1 mouse_genomes_project 10 103564463 103681657 + MGP_NODShiLtJ_P0026680 Ntn4 protein_coding protein_coding MGP_NODShiLtJ_T0098645.1 MGP_NODShiLtJ_G0037039.1 mouse_genomes_project 10 102332073 102332135 + Gm25884 snRNA snRNA MGP_NODShiLtJ_T0027350.1 MGP_NODShiLtJ_G0017753.1 mouse_genomes_project 10 145384619 145387346 - MGP_NODShiLtJ_P0027350 Mettl7b protein_coding protein_coding MGP_NODShiLtJ_T0017011.1 MGP_NODShiLtJ_G0015012.1 mouse_genomes_project 10 136085973 136091671 + Gm15910 processed_transcript processed_transcript MGP_NODShiLtJ_T0026121.1 MGP_NODShiLtJ_G0017376.1 mouse_genomes_project 10 89339019 89341709 + MGP_NODShiLtJ_P0026121 Izumo4 protein_coding protein_coding MGP_NODShiLtJ_T0024589.1 MGP_NODShiLtJ_G0016942.1 mouse_genomes_project 10 23660510 23667392 + MGP_NODShiLtJ_P0024589 Taar2 protein_coding protein_coding MGP_NODShiLtJ_T0012316.1 MGP_NODShiLtJ_G0010424.1 mouse_genomes_project 10 106617601 106617790 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006079.1 MGP_NODShiLtJ_G0005073.1 mouse_genomes_project 10 101979169 102197878 - Gm20757 lincRNA lincRNA MGP_NODShiLtJ_T0026068.1 MGP_NODShiLtJ_G0017362.1 mouse_genomes_project 10 88990819 88997514 - MGP_NODShiLtJ_P0026068 Mbd3 protein_coding protein_coding MGP_NODShiLtJ_T0026069.1 MGP_NODShiLtJ_G0017362.1 mouse_genomes_project 10 88990820 88997833 - MGP_NODShiLtJ_P0026069 Mbd3 protein_coding protein_coding MGP_NODShiLtJ_T0026070.1 MGP_NODShiLtJ_G0017362.1 mouse_genomes_project 10 88991120 88997705 - MGP_NODShiLtJ_P0026070 Mbd3 protein_coding protein_coding MGP_NODShiLtJ_T0026071.1 MGP_NODShiLtJ_G0017362.1 mouse_genomes_project 10 88991263 88994001 - MGP_NODShiLtJ_P0026071 Mbd3 protein_coding protein_coding MGP_NODShiLtJ_T0026072.1 MGP_NODShiLtJ_G0017362.1 mouse_genomes_project 10 88992176 88993608 - Mbd3 protein_coding processed_transcript MGP_NODShiLtJ_T0099888.1 MGP_NODShiLtJ_G0038282.1 mouse_genomes_project 10 142961983 142962121 - Gm24179 snoRNA snoRNA MGP_NODShiLtJ_T0026889.1 MGP_NODShiLtJ_G0017598.1 mouse_genomes_project 10 129861442 129884602 - MGP_NODShiLtJ_P0026889 Tmem19 protein_coding protein_coding MGP_NODShiLtJ_T0009542.1 MGP_NODShiLtJ_G0007675.1 mouse_genomes_project 10 138054100 138054197 + Mir6412 miRNA miRNA MGP_NODShiLtJ_T0027321.1 MGP_NODShiLtJ_G0017739.1 mouse_genomes_project 10 145094784 145103169 - MGP_NODShiLtJ_P0027321 Cdk2 protein_coding protein_coding MGP_NODShiLtJ_T0027322.1 MGP_NODShiLtJ_G0017739.1 mouse_genomes_project 10 145094784 145103169 - MGP_NODShiLtJ_P0027322 Cdk2 protein_coding protein_coding MGP_NODShiLtJ_T0026140.1 MGP_NODShiLtJ_G0017383.1 mouse_genomes_project 10 89473649 89476252 + Oaz1 protein_coding retained_intron MGP_NODShiLtJ_T0026141.1 MGP_NODShiLtJ_G0017383.1 mouse_genomes_project 10 89473650 89475925 + MGP_NODShiLtJ_P0026141 Oaz1 protein_coding protein_coding MGP_NODShiLtJ_T0026142.1 MGP_NODShiLtJ_G0017383.1 mouse_genomes_project 10 89473660 89475973 + MGP_NODShiLtJ_P0026142 Oaz1 protein_coding protein_coding MGP_NODShiLtJ_T0026143.1 MGP_NODShiLtJ_G0017383.1 mouse_genomes_project 10 89474679 89475945 + MGP_NODShiLtJ_P0026143 Oaz1 protein_coding protein_coding MGP_NODShiLtJ_T0026144.1 MGP_NODShiLtJ_G0017383.1 mouse_genomes_project 10 89474898 89476258 + MGP_NODShiLtJ_P0026144 Oaz1 protein_coding protein_coding MGP_NODShiLtJ_T0026145.1 MGP_NODShiLtJ_G0017383.1 mouse_genomes_project 10 89475560 89476253 + MGP_NODShiLtJ_P0026145 Oaz1 protein_coding protein_coding MGP_NODShiLtJ_T0027065.1 MGP_NODShiLtJ_G0017657.1 mouse_genomes_project 10 142998334 143032908 - MGP_NODShiLtJ_P0027065 Xrcc6bp1 protein_coding protein_coding MGP_NODShiLtJ_T0027066.1 MGP_NODShiLtJ_G0017657.1 mouse_genomes_project 10 143018935 143032908 - MGP_NODShiLtJ_P0027066 Xrcc6bp1 protein_coding protein_coding MGP_NODShiLtJ_T0003041.1 MGP_NODShiLtJ_G0002831.1 mouse_genomes_project 10 131064727 131067913 + Kcnmb4os1 antisense antisense MGP_NODShiLtJ_T0026966.1 MGP_NODShiLtJ_G0017624.1 mouse_genomes_project 10 132596855 132612136 - MGP_NODShiLtJ_P0026966 Slc35e3 protein_coding protein_coding MGP_NODShiLtJ_T0099892.1 MGP_NODShiLtJ_G0038286.1 mouse_genomes_project 10 144682743 144682878 + Gm23182 snoRNA snoRNA MGP_NODShiLtJ_T0024693.1 MGP_NODShiLtJ_G0016985.1 mouse_genomes_project 10 32064256 32078883 + MGP_NODShiLtJ_P0024693 Hddc2 protein_coding protein_coding MGP_NODShiLtJ_T0024694.1 MGP_NODShiLtJ_G0016985.1 mouse_genomes_project 10 32064279 32067907 + Hddc2 protein_coding retained_intron MGP_NODShiLtJ_T0024695.1 MGP_NODShiLtJ_G0016985.1 mouse_genomes_project 10 32064281 32068718 + Hddc2 protein_coding retained_intron MGP_NODShiLtJ_T0024696.1 MGP_NODShiLtJ_G0016985.1 mouse_genomes_project 10 32064346 32078863 + MGP_NODShiLtJ_P0024696 Hddc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024697.1 MGP_NODShiLtJ_G0016985.1 mouse_genomes_project 10 32071039 32078881 + Hddc2 protein_coding retained_intron MGP_NODShiLtJ_T0026434.1 MGP_NODShiLtJ_G0017456.1 mouse_genomes_project 10 93701562 93810009 + MGP_NODShiLtJ_P0026434 Polr3b protein_coding protein_coding MGP_NODShiLtJ_T0025079.1 MGP_NODShiLtJ_G0017119.1 mouse_genomes_project 10 65592875 65593211 + MGP_NODShiLtJ_P0025079 Gm10322 protein_coding protein_coding MGP_NODShiLtJ_T0012282.1 MGP_NODShiLtJ_G0010390.1 mouse_genomes_project 10 44966655 44967133 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025320.1 MGP_NODShiLtJ_G0017179.1 mouse_genomes_project 10 70365183 70544090 - MGP_NODShiLtJ_P0025320 Lrrtm3 protein_coding protein_coding MGP_NODShiLtJ_T0025321.1 MGP_NODShiLtJ_G0017179.1 mouse_genomes_project 10 70366601 70544093 - Lrrtm3 protein_coding processed_transcript MGP_NODShiLtJ_T0025322.1 MGP_NODShiLtJ_G0017179.1 mouse_genomes_project 10 70541311 70544063 - Lrrtm3 protein_coding retained_intron MGP_NODShiLtJ_T0025323.1 MGP_NODShiLtJ_G0017179.1 mouse_genomes_project 10 70542869 70544066 - MGP_NODShiLtJ_P0025323 Lrrtm3 protein_coding protein_coding MGP_NODShiLtJ_T0099893.1 MGP_NODShiLtJ_G0038287.1 mouse_genomes_project 10 145772110 145772244 + Gm25764 snoRNA snoRNA MGP_NODShiLtJ_T0012317.1 MGP_NODShiLtJ_G0010425.1 mouse_genomes_project 10 106701478 106702387 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027037.1 MGP_NODShiLtJ_G0017648.1 mouse_genomes_project 10 137119360 137417863 - MGP_NODShiLtJ_P0027037 Srgap1 protein_coding protein_coding MGP_NODShiLtJ_T0027038.1 MGP_NODShiLtJ_G0017648.1 mouse_genomes_project 10 137119360 137417856 - MGP_NODShiLtJ_P0027038 Srgap1 protein_coding protein_coding MGP_NODShiLtJ_T0027039.1 MGP_NODShiLtJ_G0017648.1 mouse_genomes_project 10 137123598 137146627 - Srgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0027040.1 MGP_NODShiLtJ_G0017648.1 mouse_genomes_project 10 137146161 137164140 - MGP_NODShiLtJ_P0027040 Srgap1 protein_coding protein_coding MGP_NODShiLtJ_T0027041.1 MGP_NODShiLtJ_G0017648.1 mouse_genomes_project 10 137251884 137417863 - Srgap1 protein_coding retained_intron MGP_NODShiLtJ_T0026237.1 MGP_NODShiLtJ_G0017411.1 mouse_genomes_project 10 90003639 90008788 + MGP_NODShiLtJ_P0026237 Cactin protein_coding protein_coding MGP_NODShiLtJ_T0026695.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103873869 103928359 - MGP_NODShiLtJ_P0026695 Vezt protein_coding protein_coding MGP_NODShiLtJ_T0026696.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103915404 103993238 - MGP_NODShiLtJ_P0026696 Vezt protein_coding protein_coding MGP_NODShiLtJ_T0026697.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103921987 103993169 - MGP_NODShiLtJ_P0026697 Vezt protein_coding protein_coding MGP_NODShiLtJ_T0026698.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103925161 103993126 - MGP_NODShiLtJ_P0026698 Vezt protein_coding protein_coding MGP_NODShiLtJ_T0026699.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103925618 103993163 - MGP_NODShiLtJ_P0026699 Vezt protein_coding protein_coding MGP_NODShiLtJ_T0026700.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103940077 103953853 - MGP_NODShiLtJ_P0026700 Vezt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026701.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103942773 103993198 - MGP_NODShiLtJ_P0026701 Vezt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026702.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103950393 103993222 - MGP_NODShiLtJ_P0026702 Vezt protein_coding protein_coding MGP_NODShiLtJ_T0026703.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103953789 103977173 - MGP_NODShiLtJ_P0026703 Vezt protein_coding protein_coding MGP_NODShiLtJ_T0026704.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103958650 103993170 - Vezt protein_coding retained_intron MGP_NODShiLtJ_T0026705.1 MGP_NODShiLtJ_G0017522.1 mouse_genomes_project 10 103960824 103993088 - Vezt protein_coding processed_transcript MGP_NODShiLtJ_T0000335.1 MGP_NODShiLtJ_G0000273.1 mouse_genomes_project 10 94126279 94126347 + mt-Tp Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0024467.1 MGP_NODShiLtJ_G0016902.1 mouse_genomes_project 10 17259805 17348067 - MGP_NODShiLtJ_P0024467 Ect2l protein_coding protein_coding MGP_NODShiLtJ_T0024468.1 MGP_NODShiLtJ_G0016902.1 mouse_genomes_project 10 17259805 17306746 - MGP_NODShiLtJ_P0024468 Ect2l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024320.1 MGP_NODShiLtJ_G0016866.1 mouse_genomes_project 10 5246096 5277873 + MGP_NODShiLtJ_P0024320 Ppil4 protein_coding protein_coding MGP_NODShiLtJ_T0024321.1 MGP_NODShiLtJ_G0016866.1 mouse_genomes_project 10 5246113 5262049 + Ppil4 protein_coding retained_intron MGP_NODShiLtJ_T0024322.1 MGP_NODShiLtJ_G0016866.1 mouse_genomes_project 10 5246126 5267554 + MGP_NODShiLtJ_P0024322 Ppil4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024323.1 MGP_NODShiLtJ_G0016866.1 mouse_genomes_project 10 5253392 5260078 + Ppil4 protein_coding retained_intron MGP_NODShiLtJ_T0003009.1 MGP_NODShiLtJ_G0002808.1 mouse_genomes_project 10 88967683 88968945 + Gm15124 antisense antisense MGP_NODShiLtJ_T0025290.1 MGP_NODShiLtJ_G0017170.1 mouse_genomes_project 10 69370490 69379599 - MGP_NODShiLtJ_P0025290 Hnrnph3 protein_coding protein_coding MGP_NODShiLtJ_T0025291.1 MGP_NODShiLtJ_G0017170.1 mouse_genomes_project 10 69370490 69379599 - MGP_NODShiLtJ_P0025291 Hnrnph3 protein_coding protein_coding MGP_NODShiLtJ_T0025292.1 MGP_NODShiLtJ_G0017170.1 mouse_genomes_project 10 69371254 69379922 - MGP_NODShiLtJ_P0025292 Hnrnph3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025293.1 MGP_NODShiLtJ_G0017170.1 mouse_genomes_project 10 69371257 69371995 - Hnrnph3 protein_coding retained_intron MGP_NODShiLtJ_T0025294.1 MGP_NODShiLtJ_G0017170.1 mouse_genomes_project 10 69372244 69373911 - Hnrnph3 protein_coding retained_intron MGP_NODShiLtJ_T0025295.1 MGP_NODShiLtJ_G0017170.1 mouse_genomes_project 10 69373633 69379552 - MGP_NODShiLtJ_P0025295 Hnrnph3 protein_coding protein_coding MGP_NODShiLtJ_T0000817.1 MGP_NODShiLtJ_G0000747.1 mouse_genomes_project 10 135931549 135933361 + TEC TEC MGP_NODShiLtJ_T0101536.1 MGP_NODShiLtJ_G0039706.1 mouse_genomes_project 10 146585661 146588967 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0026576.1 MGP_NODShiLtJ_G0017499.1 mouse_genomes_project 10 99007383 99058803 - MGP_NODShiLtJ_P0026576 Nr1h4 protein_coding protein_coding MGP_NODShiLtJ_T0026577.1 MGP_NODShiLtJ_G0017499.1 mouse_genomes_project 10 99007383 99058794 - MGP_NODShiLtJ_P0026577 Nr1h4 protein_coding protein_coding MGP_NODShiLtJ_T0026578.1 MGP_NODShiLtJ_G0017499.1 mouse_genomes_project 10 99007522 99090182 - MGP_NODShiLtJ_P0026578 Nr1h4 protein_coding protein_coding MGP_NODShiLtJ_T0002985.1 MGP_NODShiLtJ_G0002788.1 mouse_genomes_project 10 48220803 48223004 - Gm15934 antisense antisense MGP_NODShiLtJ_T0012264.1 MGP_NODShiLtJ_G0010372.1 mouse_genomes_project 10 5666754 5667729 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006103.1 MGP_NODShiLtJ_G0005091.1 mouse_genomes_project 10 144870746 144875629 + A430046D13Rik lincRNA lincRNA MGP_NODShiLtJ_T0025722.1 MGP_NODShiLtJ_G0017266.1 mouse_genomes_project 10 85955847 85956210 + MGP_NODShiLtJ_P0025722 Gm10100 protein_coding protein_coding MGP_NODShiLtJ_T0025922.1 MGP_NODShiLtJ_G0017331.1 mouse_genomes_project 10 88449524 88449809 + MGP_NODShiLtJ_P0025922 Gm26602 protein_coding protein_coding MGP_NODShiLtJ_T0026239.1 MGP_NODShiLtJ_G0017413.1 mouse_genomes_project 10 90021701 90029123 - MGP_NODShiLtJ_P0026239 Gipc3 protein_coding protein_coding MGP_NODShiLtJ_T0099849.1 MGP_NODShiLtJ_G0038243.1 mouse_genomes_project 10 40367461 40367593 + Gm24889 snoRNA snoRNA MGP_NODShiLtJ_T0003034.1 MGP_NODShiLtJ_G0002827.1 mouse_genomes_project 10 109840338 109845675 - Gm16239 antisense antisense MGP_NODShiLtJ_T0002987.1 MGP_NODShiLtJ_G0002790.1 mouse_genomes_project 10 67042536 67052202 + Gm26947 antisense antisense MGP_NODShiLtJ_T0098624.1 MGP_NODShiLtJ_G0037018.1 mouse_genomes_project 10 59970970 59971032 - Gm25602 snRNA snRNA MGP_NODShiLtJ_T0027105.1 MGP_NODShiLtJ_G0017671.1 mouse_genomes_project 10 143352026 143357857 - MGP_NODShiLtJ_P0027105 Arhgef25 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027106.1 MGP_NODShiLtJ_G0017671.1 mouse_genomes_project 10 143352029 143359564 - MGP_NODShiLtJ_P0027106 Arhgef25 protein_coding protein_coding MGP_NODShiLtJ_T0027107.1 MGP_NODShiLtJ_G0017671.1 mouse_genomes_project 10 143352029 143359333 - MGP_NODShiLtJ_P0027107 Arhgef25 protein_coding protein_coding MGP_NODShiLtJ_T0024591.1 MGP_NODShiLtJ_G0016944.1 mouse_genomes_project 10 23687511 23688555 + MGP_NODShiLtJ_P0024591 Taar4 protein_coding protein_coding MGP_NODShiLtJ_T0027361.1 MGP_NODShiLtJ_G0017761.1 mouse_genomes_project 10 145603092 145604046 - MGP_NODShiLtJ_P0027361 Olfr771 protein_coding protein_coding MGP_NODShiLtJ_T0101529.1 MGP_NODShiLtJ_G0039699.1 mouse_genomes_project 10 117964537 117964721 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0024624.1 MGP_NODShiLtJ_G0016961.1 mouse_genomes_project 10 25074181 25149942 - Akap7 protein_coding processed_transcript MGP_NODShiLtJ_T0024625.1 MGP_NODShiLtJ_G0016961.1 mouse_genomes_project 10 25074181 25108755 - MGP_NODShiLtJ_P0024625 Akap7 protein_coding protein_coding MGP_NODShiLtJ_T0024626.1 MGP_NODShiLtJ_G0016961.1 mouse_genomes_project 10 25075200 25214905 - MGP_NODShiLtJ_P0024626 Akap7 protein_coding protein_coding MGP_NODShiLtJ_T0024627.1 MGP_NODShiLtJ_G0016961.1 mouse_genomes_project 10 25126666 25205435 - MGP_NODShiLtJ_P0024627 Akap7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024628.1 MGP_NODShiLtJ_G0016961.1 mouse_genomes_project 10 25179874 25211841 - MGP_NODShiLtJ_P0024628 Akap7 protein_coding protein_coding MGP_NODShiLtJ_T0024629.1 MGP_NODShiLtJ_G0016961.1 mouse_genomes_project 10 25195126 25214848 - MGP_NODShiLtJ_P0024629 Akap7 protein_coding protein_coding MGP_NODShiLtJ_T0024630.1 MGP_NODShiLtJ_G0016961.1 mouse_genomes_project 10 25199719 25212814 - MGP_NODShiLtJ_P0024630 Akap7 protein_coding protein_coding MGP_NODShiLtJ_T0024631.1 MGP_NODShiLtJ_G0016961.1 mouse_genomes_project 10 25199820 25225019 - MGP_NODShiLtJ_P0024631 Akap7 protein_coding protein_coding MGP_NODShiLtJ_T0027382.1 MGP_NODShiLtJ_G0017778.1 mouse_genomes_project 10 146012199 146013138 + MGP_NODShiLtJ_P0027382 Olfr791 protein_coding protein_coding MGP_NODShiLtJ_T0025055.1 MGP_NODShiLtJ_G0017108.1 mouse_genomes_project 10 64398046 64475855 + MGP_NODShiLtJ_P0025055 Ccdc138 protein_coding protein_coding MGP_NODShiLtJ_T0025056.1 MGP_NODShiLtJ_G0017108.1 mouse_genomes_project 10 64398290 64475856 + MGP_NODShiLtJ_P0025056 Ccdc138 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026491.1 MGP_NODShiLtJ_G0017476.1 mouse_genomes_project 10 95992878 96073374 + MGP_NODShiLtJ_P0026491 protein_coding protein_coding MGP_NODShiLtJ_T0026492.1 MGP_NODShiLtJ_G0017476.1 mouse_genomes_project 10 95992878 96012519 + MGP_NODShiLtJ_P0026492 protein_coding protein_coding MGP_NODShiLtJ_T0026561.1 MGP_NODShiLtJ_G0017494.1 mouse_genomes_project 10 98198350 98205349 + MGP_NODShiLtJ_P0026561 Arl1 protein_coding protein_coding MGP_NODShiLtJ_T0026562.1 MGP_NODShiLtJ_G0017494.1 mouse_genomes_project 10 98199053 98214363 + MGP_NODShiLtJ_P0026562 Arl1 protein_coding protein_coding MGP_NODShiLtJ_T0026709.1 MGP_NODShiLtJ_G0017524.1 mouse_genomes_project 10 104113217 104165696 + MGP_NODShiLtJ_P0026709 Nr2c1 protein_coding protein_coding MGP_NODShiLtJ_T0026710.1 MGP_NODShiLtJ_G0017524.1 mouse_genomes_project 10 104113613 104164332 + MGP_NODShiLtJ_P0026710 Nr2c1 protein_coding protein_coding MGP_NODShiLtJ_T0026711.1 MGP_NODShiLtJ_G0017524.1 mouse_genomes_project 10 104121516 104164002 + MGP_NODShiLtJ_P0026711 Nr2c1 protein_coding protein_coding MGP_NODShiLtJ_T0006062.1 MGP_NODShiLtJ_G0005069.1 mouse_genomes_project 10 99277958 99304043 + lincRNA lincRNA MGP_NODShiLtJ_T0002983.1 MGP_NODShiLtJ_G0002786.1 mouse_genomes_project 10 45881860 45883282 + Gm29245 antisense antisense MGP_NODShiLtJ_T0011158.1 MGP_NODShiLtJ_G0009291.1 mouse_genomes_project 10 43378695 43378938 - Gm22948 misc_RNA misc_RNA MGP_NODShiLtJ_T0027298.1 MGP_NODShiLtJ_G0017732.1 mouse_genomes_project 10 144923144 144924336 - MGP_NODShiLtJ_P0027298 protein_coding protein_coding MGP_NODShiLtJ_T0027299.1 MGP_NODShiLtJ_G0017732.1 mouse_genomes_project 10 144923144 144924184 - MGP_NODShiLtJ_P0027299 protein_coding protein_coding MGP_NODShiLtJ_T0027300.1 MGP_NODShiLtJ_G0017732.1 mouse_genomes_project 10 144923144 144924193 - MGP_NODShiLtJ_P0027300 protein_coding protein_coding MGP_NODShiLtJ_T0027301.1 MGP_NODShiLtJ_G0017732.1 mouse_genomes_project 10 144923147 144924169 - protein_coding retained_intron MGP_NODShiLtJ_T0027302.1 MGP_NODShiLtJ_G0017732.1 mouse_genomes_project 10 144923150 144924133 - MGP_NODShiLtJ_P0027302 protein_coding protein_coding MGP_NODShiLtJ_T0027303.1 MGP_NODShiLtJ_G0017732.1 mouse_genomes_project 10 144923151 144924190 - protein_coding retained_intron MGP_NODShiLtJ_T0027304.1 MGP_NODShiLtJ_G0017732.1 mouse_genomes_project 10 144923506 144924143 - protein_coding retained_intron MGP_NODShiLtJ_T0024785.1 MGP_NODShiLtJ_G0017019.1 mouse_genomes_project 10 42305617 42312153 - MGP_NODShiLtJ_P0024785 Mfsd4b2 protein_coding protein_coding MGP_NODShiLtJ_T0025305.1 MGP_NODShiLtJ_G0017175.1 mouse_genomes_project 10 69712300 69780912 - MGP_NODShiLtJ_P0025305 Sirt1 protein_coding protein_coding MGP_NODShiLtJ_T0025306.1 MGP_NODShiLtJ_G0017175.1 mouse_genomes_project 10 69712302 69733375 - MGP_NODShiLtJ_P0025306 Sirt1 protein_coding protein_coding MGP_NODShiLtJ_T0025307.1 MGP_NODShiLtJ_G0017175.1 mouse_genomes_project 10 69712302 69733375 - MGP_NODShiLtJ_P0025307 Sirt1 protein_coding protein_coding MGP_NODShiLtJ_T0025308.1 MGP_NODShiLtJ_G0017175.1 mouse_genomes_project 10 69712302 69731335 - MGP_NODShiLtJ_P0025308 Sirt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025309.1 MGP_NODShiLtJ_G0017175.1 mouse_genomes_project 10 69712353 69733378 - MGP_NODShiLtJ_P0025309 Sirt1 protein_coding protein_coding MGP_NODShiLtJ_T0025310.1 MGP_NODShiLtJ_G0017175.1 mouse_genomes_project 10 69715469 69718957 - Sirt1 protein_coding retained_intron MGP_NODShiLtJ_T0025311.1 MGP_NODShiLtJ_G0017175.1 mouse_genomes_project 10 69724720 69731335 - Sirt1 protein_coding retained_intron MGP_NODShiLtJ_T0009501.1 MGP_NODShiLtJ_G0007634.1 mouse_genomes_project 10 68980499 68980550 + Mir7215 miRNA miRNA MGP_NODShiLtJ_T0027411.1 MGP_NODShiLtJ_G0017799.1 mouse_genomes_project 10 146628448 146629267 - MGP_NODShiLtJ_P0027411 protein_coding protein_coding MGP_NODShiLtJ_T0017010.1 MGP_NODShiLtJ_G0015011.1 mouse_genomes_project 10 135513467 135537120 + 1700006J14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0024721.1 MGP_NODShiLtJ_G0017001.1 mouse_genomes_project 10 35518905 35580114 - MGP_NODShiLtJ_P0024721 Dse protein_coding protein_coding MGP_NODShiLtJ_T0002998.1 MGP_NODShiLtJ_G0002798.1 mouse_genomes_project 10 78509186 78509962 + Gm15647 antisense antisense MGP_NODShiLtJ_T0098646.1 MGP_NODShiLtJ_G0037040.1 mouse_genomes_project 10 104152331 104152413 - Gm26122 snRNA snRNA MGP_NODShiLtJ_T0026282.1 MGP_NODShiLtJ_G0017421.1 mouse_genomes_project 10 90164395 90189187 - MGP_NODShiLtJ_P0026282 Celf5 protein_coding protein_coding MGP_NODShiLtJ_T0026283.1 MGP_NODShiLtJ_G0017421.1 mouse_genomes_project 10 90172176 90175969 - Celf5 protein_coding retained_intron MGP_NODShiLtJ_T0026284.1 MGP_NODShiLtJ_G0017421.1 mouse_genomes_project 10 90172668 90179192 - Celf5 protein_coding retained_intron MGP_NODShiLtJ_T0026285.1 MGP_NODShiLtJ_G0017421.1 mouse_genomes_project 10 90172920 90189159 - Celf5 protein_coding retained_intron MGP_NODShiLtJ_T0026804.1 MGP_NODShiLtJ_G0017564.1 mouse_genomes_project 10 114745927 115021178 - MGP_NODShiLtJ_P0026804 Lrriq1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026805.1 MGP_NODShiLtJ_G0017564.1 mouse_genomes_project 10 114775982 115023347 - MGP_NODShiLtJ_P0026805 Lrriq1 protein_coding protein_coding MGP_NODShiLtJ_T0024813.1 MGP_NODShiLtJ_G0017035.1 mouse_genomes_project 10 43857960 44012614 + MGP_NODShiLtJ_P0024813 Ak9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024814.1 MGP_NODShiLtJ_G0017035.1 mouse_genomes_project 10 43858245 43903125 + MGP_NODShiLtJ_P0024814 Ak9 protein_coding protein_coding MGP_NODShiLtJ_T0024815.1 MGP_NODShiLtJ_G0017035.1 mouse_genomes_project 10 43906548 44015416 + MGP_NODShiLtJ_P0024815 Ak9 protein_coding protein_coding MGP_NODShiLtJ_T0024730.1 MGP_NODShiLtJ_G0017006.1 mouse_genomes_project 10 35872443 36015058 + MGP_NODShiLtJ_P0024730 Frk protein_coding protein_coding MGP_NODShiLtJ_T0024731.1 MGP_NODShiLtJ_G0017006.1 mouse_genomes_project 10 35872443 36015058 + MGP_NODShiLtJ_P0024731 Frk protein_coding protein_coding MGP_NODShiLtJ_T0025276.1 MGP_NODShiLtJ_G0017168.1 mouse_genomes_project 10 69292603 69323495 + MGP_NODShiLtJ_P0025276 Dna2 protein_coding protein_coding MGP_NODShiLtJ_T0025277.1 MGP_NODShiLtJ_G0017168.1 mouse_genomes_project 10 69292652 69323077 + MGP_NODShiLtJ_P0025277 Dna2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025278.1 MGP_NODShiLtJ_G0017168.1 mouse_genomes_project 10 69292657 69295281 + Dna2 protein_coding retained_intron MGP_NODShiLtJ_T0025279.1 MGP_NODShiLtJ_G0017168.1 mouse_genomes_project 10 69292687 69312886 + Dna2 protein_coding retained_intron MGP_NODShiLtJ_T0025280.1 MGP_NODShiLtJ_G0017168.1 mouse_genomes_project 10 69312439 69323494 + Dna2 protein_coding retained_intron MGP_NODShiLtJ_T0025281.1 MGP_NODShiLtJ_G0017168.1 mouse_genomes_project 10 69312734 69323489 + Dna2 protein_coding retained_intron MGP_NODShiLtJ_T0101532.1 MGP_NODShiLtJ_G0039702.1 mouse_genomes_project 10 145795959 145798398 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000792.1 MGP_NODShiLtJ_G0000723.1 mouse_genomes_project 10 12428217 12429043 + TEC TEC MGP_NODShiLtJ_T0025726.1 MGP_NODShiLtJ_G0017270.1 mouse_genomes_project 10 86075825 86076806 - MGP_NODShiLtJ_P0025726 Krtap10-4 protein_coding protein_coding MGP_NODShiLtJ_T0026856.1 MGP_NODShiLtJ_G0017581.1 mouse_genomes_project 10 124522548 124591918 - MGP_NODShiLtJ_P0026856 Zdhhc17 protein_coding protein_coding MGP_NODShiLtJ_T0026857.1 MGP_NODShiLtJ_G0017581.1 mouse_genomes_project 10 124543369 124591855 - MGP_NODShiLtJ_P0026857 Zdhhc17 protein_coding protein_coding MGP_NODShiLtJ_T0025252.1 MGP_NODShiLtJ_G0017161.1 mouse_genomes_project 10 68822983 68866317 - MGP_NODShiLtJ_P0025252 Kif1bp protein_coding protein_coding MGP_NODShiLtJ_T0025253.1 MGP_NODShiLtJ_G0017161.1 mouse_genomes_project 10 68824012 68857040 - MGP_NODShiLtJ_P0025253 Kif1bp protein_coding protein_coding MGP_NODShiLtJ_T0025254.1 MGP_NODShiLtJ_G0017161.1 mouse_genomes_project 10 68845296 68866254 - MGP_NODShiLtJ_P0025254 Kif1bp protein_coding protein_coding MGP_NODShiLtJ_T0025255.1 MGP_NODShiLtJ_G0017161.1 mouse_genomes_project 10 68845370 68852949 - MGP_NODShiLtJ_P0025255 Kif1bp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025256.1 MGP_NODShiLtJ_G0017161.1 mouse_genomes_project 10 68846426 68850406 - Kif1bp protein_coding retained_intron MGP_NODShiLtJ_T0025257.1 MGP_NODShiLtJ_G0017161.1 mouse_genomes_project 10 68852698 68857028 - Kif1bp protein_coding retained_intron MGP_NODShiLtJ_T0025258.1 MGP_NODShiLtJ_G0017161.1 mouse_genomes_project 10 68856674 68866271 - Kif1bp protein_coding retained_intron MGP_NODShiLtJ_T0026978.1 MGP_NODShiLtJ_G0017631.1 mouse_genomes_project 10 134223247 134265026 - MGP_NODShiLtJ_P0026978 Cand1 protein_coding protein_coding MGP_NODShiLtJ_T0026979.1 MGP_NODShiLtJ_G0017631.1 mouse_genomes_project 10 134230306 134232193 - Cand1 protein_coding retained_intron MGP_NODShiLtJ_T0026980.1 MGP_NODShiLtJ_G0017631.1 mouse_genomes_project 10 134235798 134236629 - Cand1 protein_coding retained_intron MGP_NODShiLtJ_T0026981.1 MGP_NODShiLtJ_G0017631.1 mouse_genomes_project 10 134240496 134264274 - MGP_NODShiLtJ_P0026981 Cand1 protein_coding protein_coding MGP_NODShiLtJ_T0024485.1 MGP_NODShiLtJ_G0016908.1 mouse_genomes_project 10 18013772 18025698 + MGP_NODShiLtJ_P0024485 Perp protein_coding protein_coding MGP_NODShiLtJ_T0026544.1 MGP_NODShiLtJ_G0017490.1 mouse_genomes_project 10 97875487 97903349 - MGP_NODShiLtJ_P0026544 Chpt1 protein_coding protein_coding MGP_NODShiLtJ_T0026545.1 MGP_NODShiLtJ_G0017490.1 mouse_genomes_project 10 97875746 97909190 - MGP_NODShiLtJ_P0026545 Chpt1 protein_coding protein_coding MGP_NODShiLtJ_T0026547.1 MGP_NODShiLtJ_G0017490.1 mouse_genomes_project 10 97898150 97937090 - MGP_NODShiLtJ_P0026547 Chpt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026548.1 MGP_NODShiLtJ_G0017490.1 mouse_genomes_project 10 97898150 97937307 - MGP_NODShiLtJ_P0026548 Chpt1 protein_coding protein_coding MGP_NODShiLtJ_T0026549.1 MGP_NODShiLtJ_G0017490.1 mouse_genomes_project 10 97901545 97937226 - MGP_NODShiLtJ_P0026549 Chpt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026550.1 MGP_NODShiLtJ_G0017490.1 mouse_genomes_project 10 97917283 97937255 - MGP_NODShiLtJ_P0026550 Chpt1 protein_coding protein_coding MGP_NODShiLtJ_T0009512.1 MGP_NODShiLtJ_G0007645.1 mouse_genomes_project 10 88849868 88849937 + Mir6911 miRNA miRNA MGP_NODShiLtJ_T0012319.1 MGP_NODShiLtJ_G0010427.1 mouse_genomes_project 10 111092374 111093058 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012310.1 MGP_NODShiLtJ_G0010418.1 mouse_genomes_project 10 89601887 89602144 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011161.1 MGP_NODShiLtJ_G0009294.1 mouse_genomes_project 10 55609077 55609367 - Gm23883 misc_RNA misc_RNA MGP_NODShiLtJ_T0024600.1 MGP_NODShiLtJ_G0016953.1 mouse_genomes_project 10 23890107 23891154 - MGP_NODShiLtJ_P0024600 Taar9 protein_coding protein_coding MGP_NODShiLtJ_T0025812.1 MGP_NODShiLtJ_G0017299.1 mouse_genomes_project 10 87394924 87403321 + MGP_NODShiLtJ_P0025812 Olfr1351 protein_coding protein_coding MGP_NODShiLtJ_T0025813.1 MGP_NODShiLtJ_G0017299.1 mouse_genomes_project 10 87402361 87403321 + MGP_NODShiLtJ_P0025813 Olfr1351 protein_coding protein_coding MGP_NODShiLtJ_T0024639.1 MGP_NODShiLtJ_G0016965.1 mouse_genomes_project 10 26044097 26045290 + MGP_NODShiLtJ_P0024639 Gm9767 protein_coding protein_coding MGP_NODShiLtJ_T0027398.1 MGP_NODShiLtJ_G0017789.1 mouse_genomes_project 10 146346947 146350586 + MGP_NODShiLtJ_P0027398 protein_coding protein_coding MGP_NODShiLtJ_T0027399.1 MGP_NODShiLtJ_G0017789.1 mouse_genomes_project 10 146350051 146351151 + MGP_NODShiLtJ_P0027399 protein_coding protein_coding MGP_NODShiLtJ_T0027203.1 MGP_NODShiLtJ_G0017701.1 mouse_genomes_project 10 144120160 144130254 + MGP_NODShiLtJ_P0027203 BC089597 protein_coding protein_coding MGP_NODShiLtJ_T0024200.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1385262 1416411 - MGP_NODShiLtJ_P0024200 Rmnd1 protein_coding protein_coding MGP_NODShiLtJ_T0024201.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1386516 1391325 - Rmnd1 protein_coding retained_intron MGP_NODShiLtJ_T0024202.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1386893 1391134 - MGP_NODShiLtJ_P0024202 Rmnd1 protein_coding protein_coding MGP_NODShiLtJ_T0024203.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1387330 1396613 - Rmnd1 protein_coding retained_intron MGP_NODShiLtJ_T0024204.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1410025 1416368 - Rmnd1 protein_coding retained_intron MGP_NODShiLtJ_T0024205.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1411174 1416323 - MGP_NODShiLtJ_P0024205 Rmnd1 protein_coding protein_coding MGP_NODShiLtJ_T0024206.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1411376 1416362 - MGP_NODShiLtJ_P0024206 Rmnd1 protein_coding protein_coding MGP_NODShiLtJ_T0024207.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1411454 1416362 - MGP_NODShiLtJ_P0024207 Rmnd1 protein_coding protein_coding MGP_NODShiLtJ_T0024208.1 MGP_NODShiLtJ_G0016845.1 mouse_genomes_project 10 1412562 1416329 - Rmnd1 protein_coding retained_intron MGP_NODShiLtJ_T0026524.1 MGP_NODShiLtJ_G0017486.1 mouse_genomes_project 10 97546324 97579866 + MGP_NODShiLtJ_P0026524 Nup37 protein_coding protein_coding MGP_NODShiLtJ_T0026525.1 MGP_NODShiLtJ_G0017486.1 mouse_genomes_project 10 97546403 97579866 + MGP_NODShiLtJ_P0026525 Nup37 protein_coding protein_coding MGP_NODShiLtJ_T0025626.1 MGP_NODShiLtJ_G0017240.1 mouse_genomes_project 10 84458870 84554502 - MGP_NODShiLtJ_P0025626 Pcnt protein_coding protein_coding MGP_NODShiLtJ_T0025627.1 MGP_NODShiLtJ_G0017240.1 mouse_genomes_project 10 84458874 84554208 - MGP_NODShiLtJ_P0025627 Pcnt protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025847.1 MGP_NODShiLtJ_G0017314.1 mouse_genomes_project 10 88204683 88210925 + MGP_NODShiLtJ_P0025847 Gzmm protein_coding protein_coding MGP_NODShiLtJ_T0025848.1 MGP_NODShiLtJ_G0017314.1 mouse_genomes_project 10 88209421 88210924 + Gzmm protein_coding processed_transcript MGP_NODShiLtJ_T0002986.1 MGP_NODShiLtJ_G0002789.1 mouse_genomes_project 10 65783177 65784161 - Gm17059 antisense antisense MGP_NODShiLtJ_T0003018.1 MGP_NODShiLtJ_G0002814.1 mouse_genomes_project 10 90166320 90168134 + Gm16105 antisense antisense MGP_NODShiLtJ_T0098248.1 MGP_NODShiLtJ_G0036659.1 mouse_genomes_project 10 81254862 81300645 + sense_intronic sense_intronic MGP_NODShiLtJ_T0101525.1 MGP_NODShiLtJ_G0039695.1 mouse_genomes_project 10 23750528 23751061 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009509.1 MGP_NODShiLtJ_G0007642.1 mouse_genomes_project 10 86855798 86855920 + Gm27541 miRNA miRNA MGP_NODShiLtJ_T0025775.1 MGP_NODShiLtJ_G0017279.1 mouse_genomes_project 10 86461142 86468844 - MGP_NODShiLtJ_P0025775 D10Jhu81e protein_coding protein_coding MGP_NODShiLtJ_T0000794.1 MGP_NODShiLtJ_G0000725.1 mouse_genomes_project 10 27863647 27865407 - TEC TEC MGP_NODShiLtJ_T0097883.1 MGP_NODShiLtJ_G0036295.1 mouse_genomes_project 10 86845259 86845375 + Gm25164 rRNA rRNA MGP_NODShiLtJ_T0006035.1 MGP_NODShiLtJ_G0005049.1 mouse_genomes_project 10 69682889 69687746 - Gm26789 lincRNA lincRNA MGP_NODShiLtJ_T0025314.1 MGP_NODShiLtJ_G0017177.1 mouse_genomes_project 10 69833269 71594918 + MGP_NODShiLtJ_P0025314 Ctnna3 protein_coding protein_coding MGP_NODShiLtJ_T0025315.1 MGP_NODShiLtJ_G0017177.1 mouse_genomes_project 10 69858657 71595620 + MGP_NODShiLtJ_P0025315 Ctnna3 protein_coding protein_coding MGP_NODShiLtJ_T0025316.1 MGP_NODShiLtJ_G0017177.1 mouse_genomes_project 10 69910598 71594786 + MGP_NODShiLtJ_P0025316 Ctnna3 protein_coding protein_coding MGP_NODShiLtJ_T0025317.1 MGP_NODShiLtJ_G0017177.1 mouse_genomes_project 10 69985383 69996367 + Ctnna3 protein_coding processed_transcript MGP_NODShiLtJ_T0025318.1 MGP_NODShiLtJ_G0017177.1 mouse_genomes_project 10 70253589 70531305 + Ctnna3 protein_coding processed_transcript MGP_NODShiLtJ_T0011172.1 MGP_NODShiLtJ_G0009305.1 mouse_genomes_project 10 101943825 101943933 - Gm27366 misc_RNA misc_RNA MGP_NODShiLtJ_T0024806.1 MGP_NODShiLtJ_G0017029.1 mouse_genomes_project 10 43110068 43131767 + MGP_NODShiLtJ_P0024806 Ddo protein_coding protein_coding MGP_NODShiLtJ_T0098620.1 MGP_NODShiLtJ_G0037014.1 mouse_genomes_project 10 52550977 52551061 - Gm24256 snRNA snRNA MGP_NODShiLtJ_T0009484.1 MGP_NODShiLtJ_G0007617.1 mouse_genomes_project 10 24957798 24957883 + Gm22566 miRNA miRNA MGP_NODShiLtJ_T0012308.1 MGP_NODShiLtJ_G0010416.1 mouse_genomes_project 10 86873424 86875524 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098644.1 MGP_NODShiLtJ_G0037038.1 mouse_genomes_project 10 100730108 100730211 + Gm25390 snRNA snRNA MGP_NODShiLtJ_T0025445.1 MGP_NODShiLtJ_G0017200.1 mouse_genomes_project 10 78335694 78595203 - MGP_NODShiLtJ_P0025445 Bicc1 protein_coding protein_coding MGP_NODShiLtJ_T0025446.1 MGP_NODShiLtJ_G0017200.1 mouse_genomes_project 10 78335706 78595119 - MGP_NODShiLtJ_P0025446 Bicc1 protein_coding protein_coding MGP_NODShiLtJ_T0025447.1 MGP_NODShiLtJ_G0017200.1 mouse_genomes_project 10 78348037 78361980 - Bicc1 protein_coding retained_intron MGP_NODShiLtJ_T0026319.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90310246 90316933 - Tle6 protein_coding processed_transcript MGP_NODShiLtJ_T0026320.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90310246 90320209 - MGP_NODShiLtJ_P0026320 Tle6 protein_coding protein_coding MGP_NODShiLtJ_T0026321.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90310247 90314758 - Tle6 protein_coding retained_intron MGP_NODShiLtJ_T0026322.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90310247 90312058 - Tle6 protein_coding processed_transcript MGP_NODShiLtJ_T0026323.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90310247 90320234 - MGP_NODShiLtJ_P0026323 Tle6 protein_coding protein_coding MGP_NODShiLtJ_T0026324.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90310249 90316688 - Tle6 protein_coding processed_transcript MGP_NODShiLtJ_T0026325.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90310475 90312161 - Tle6 protein_coding retained_intron MGP_NODShiLtJ_T0026326.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90313261 90314587 - Tle6 protein_coding retained_intron MGP_NODShiLtJ_T0026327.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90313581 90315151 - Tle6 protein_coding retained_intron MGP_NODShiLtJ_T0026328.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90314551 90316681 - Tle6 protein_coding processed_transcript MGP_NODShiLtJ_T0026329.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90314571 90316674 - Tle6 protein_coding processed_transcript MGP_NODShiLtJ_T0026330.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90315295 90316710 - Tle6 protein_coding processed_transcript MGP_NODShiLtJ_T0026331.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90315335 90320191 - MGP_NODShiLtJ_P0026331 Tle6 protein_coding protein_coding MGP_NODShiLtJ_T0026332.1 MGP_NODShiLtJ_G0017428.1 mouse_genomes_project 10 90315338 90320407 - MGP_NODShiLtJ_P0026332 Tle6 protein_coding protein_coding MGP_NODShiLtJ_T0101264.1 MGP_NODShiLtJ_G0039546.1 mouse_genomes_project 10 21559671 21563439 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0025723.1 MGP_NODShiLtJ_G0017267.1 mouse_genomes_project 10 86014291 86015209 - MGP_NODShiLtJ_P0025723 protein_coding protein_coding MGP_NODShiLtJ_T0025691.1 MGP_NODShiLtJ_G0017257.1 mouse_genomes_project 10 85735817 85774176 + MGP_NODShiLtJ_P0025691 Itgb2 protein_coding protein_coding MGP_NODShiLtJ_T0025692.1 MGP_NODShiLtJ_G0017257.1 mouse_genomes_project 10 85735912 85753843 + MGP_NODShiLtJ_P0025692 Itgb2 protein_coding protein_coding MGP_NODShiLtJ_T0025693.1 MGP_NODShiLtJ_G0017257.1 mouse_genomes_project 10 85735935 85755320 + MGP_NODShiLtJ_P0025693 Itgb2 protein_coding protein_coding MGP_NODShiLtJ_T0025694.1 MGP_NODShiLtJ_G0017257.1 mouse_genomes_project 10 85735939 85774112 + MGP_NODShiLtJ_P0025694 Itgb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025695.1 MGP_NODShiLtJ_G0017257.1 mouse_genomes_project 10 85735945 85774198 + MGP_NODShiLtJ_P0025695 Itgb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026368.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91533546 91559451 + MGP_NODShiLtJ_P0026368 Tdg protein_coding protein_coding MGP_NODShiLtJ_T0026369.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91533563 91546511 + Tdg protein_coding processed_transcript MGP_NODShiLtJ_T0026370.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91534463 91550838 + MGP_NODShiLtJ_P0026370 Tdg protein_coding protein_coding MGP_NODShiLtJ_T0026371.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91546341 91550854 + Tdg protein_coding retained_intron MGP_NODShiLtJ_T0026372.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91546628 91558860 + MGP_NODShiLtJ_P0026372 Tdg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026373.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91546629 91554683 + MGP_NODShiLtJ_P0026373 Tdg protein_coding protein_coding MGP_NODShiLtJ_T0026374.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91549130 91551221 + Tdg protein_coding retained_intron MGP_NODShiLtJ_T0026375.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91550986 91554202 + Tdg protein_coding retained_intron MGP_NODShiLtJ_T0026376.1 MGP_NODShiLtJ_G0017440.1 mouse_genomes_project 10 91553504 91554853 + Tdg protein_coding retained_intron MGP_NODShiLtJ_T0027201.1 MGP_NODShiLtJ_G0017699.1 mouse_genomes_project 10 144058478 144096936 + MGP_NODShiLtJ_P0027201 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0101538.1 MGP_NODShiLtJ_G0039708.1 mouse_genomes_project 10 146789926 146790678 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0026526.1 MGP_NODShiLtJ_G0017487.1 mouse_genomes_project 10 97604481 97653938 + MGP_NODShiLtJ_P0026526 Ccdc53 protein_coding protein_coding MGP_NODShiLtJ_T0026527.1 MGP_NODShiLtJ_G0017487.1 mouse_genomes_project 10 97604534 97621383 + MGP_NODShiLtJ_P0026527 Ccdc53 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026528.1 MGP_NODShiLtJ_G0017487.1 mouse_genomes_project 10 97604540 97653786 + MGP_NODShiLtJ_P0026528 Ccdc53 protein_coding protein_coding MGP_NODShiLtJ_T0026529.1 MGP_NODShiLtJ_G0017487.1 mouse_genomes_project 10 97604559 97632577 + MGP_NODShiLtJ_P0026529 Ccdc53 protein_coding protein_coding MGP_NODShiLtJ_T0026530.1 MGP_NODShiLtJ_G0017487.1 mouse_genomes_project 10 97604572 97621085 + Ccdc53 protein_coding retained_intron MGP_NODShiLtJ_T0026531.1 MGP_NODShiLtJ_G0017487.1 mouse_genomes_project 10 97604651 97632356 + MGP_NODShiLtJ_P0026531 Ccdc53 protein_coding protein_coding MGP_NODShiLtJ_T0026532.1 MGP_NODShiLtJ_G0017487.1 mouse_genomes_project 10 97609314 97642883 + Ccdc53 protein_coding processed_transcript MGP_NODShiLtJ_T0026533.1 MGP_NODShiLtJ_G0017487.1 mouse_genomes_project 10 97643525 97653787 + Ccdc53 protein_coding processed_transcript MGP_NODShiLtJ_T0025173.1 MGP_NODShiLtJ_G0017139.1 mouse_genomes_project 10 67597027 67604147 + MGP_NODShiLtJ_P0025173 Nodal protein_coding protein_coding MGP_NODShiLtJ_T0009503.1 MGP_NODShiLtJ_G0007636.1 mouse_genomes_project 10 84303918 84304002 - Mir678 miRNA miRNA MGP_NODShiLtJ_T0098611.1 MGP_NODShiLtJ_G0037005.1 mouse_genomes_project 10 31878707 31878814 - Gm23790 snRNA snRNA MGP_NODShiLtJ_T0026859.1 MGP_NODShiLtJ_G0017583.1 mouse_genomes_project 10 124884582 124887640 + MGP_NODShiLtJ_P0026859 Bbs10 protein_coding protein_coding MGP_NODShiLtJ_T0026776.1 MGP_NODShiLtJ_G0017557.1 mouse_genomes_project 10 111297496 111386466 + MGP_NODShiLtJ_P0026776 Cep290 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026777.1 MGP_NODShiLtJ_G0017557.1 mouse_genomes_project 10 111298154 111390809 + MGP_NODShiLtJ_P0026777 Cep290 protein_coding protein_coding MGP_NODShiLtJ_T0025933.1 MGP_NODShiLtJ_G0017336.1 mouse_genomes_project 10 88519034 88522860 - Tmem259 protein_coding retained_intron MGP_NODShiLtJ_T0025934.1 MGP_NODShiLtJ_G0017336.1 mouse_genomes_project 10 88519976 88523027 - Tmem259 protein_coding retained_intron MGP_NODShiLtJ_T0025935.1 MGP_NODShiLtJ_G0017336.1 mouse_genomes_project 10 88521204 88528399 - MGP_NODShiLtJ_P0025935 Tmem259 protein_coding protein_coding MGP_NODShiLtJ_T0025936.1 MGP_NODShiLtJ_G0017336.1 mouse_genomes_project 10 88521444 88528102 - MGP_NODShiLtJ_P0025936 Tmem259 protein_coding protein_coding MGP_NODShiLtJ_T0025937.1 MGP_NODShiLtJ_G0017336.1 mouse_genomes_project 10 88522049 88522863 - Tmem259 protein_coding retained_intron MGP_NODShiLtJ_T0025844.1 MGP_NODShiLtJ_G0017312.1 mouse_genomes_project 10 88183308 88190034 + MGP_NODShiLtJ_P0025844 Tpgs1 protein_coding protein_coding MGP_NODShiLtJ_T0025582.1 MGP_NODShiLtJ_G0017224.1 mouse_genomes_project 10 83818524 83835564 - MGP_NODShiLtJ_P0025582 Gstt1 protein_coding protein_coding MGP_NODShiLtJ_T0025583.1 MGP_NODShiLtJ_G0017224.1 mouse_genomes_project 10 83818695 83834559 - MGP_NODShiLtJ_P0025583 Gstt1 protein_coding protein_coding MGP_NODShiLtJ_T0025584.1 MGP_NODShiLtJ_G0017224.1 mouse_genomes_project 10 83821506 83834711 - MGP_NODShiLtJ_P0025584 Gstt1 protein_coding protein_coding MGP_NODShiLtJ_T0012320.1 MGP_NODShiLtJ_G0010428.1 mouse_genomes_project 10 111092374 111093057 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024607.1 MGP_NODShiLtJ_G0016957.1 mouse_genomes_project 10 24481762 24558293 - MGP_NODShiLtJ_P0024607 Enpp1 protein_coding protein_coding MGP_NODShiLtJ_T0024608.1 MGP_NODShiLtJ_G0016957.1 mouse_genomes_project 10 24485282 24558294 - MGP_NODShiLtJ_P0024608 Enpp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024609.1 MGP_NODShiLtJ_G0016957.1 mouse_genomes_project 10 24485653 24558126 - MGP_NODShiLtJ_P0024609 Enpp1 protein_coding protein_coding MGP_NODShiLtJ_T0024610.1 MGP_NODShiLtJ_G0016957.1 mouse_genomes_project 10 24492670 24558132 - Enpp1 protein_coding retained_intron MGP_NODShiLtJ_T0024611.1 MGP_NODShiLtJ_G0016957.1 mouse_genomes_project 10 24516328 24523359 - Enpp1 protein_coding retained_intron MGP_NODShiLtJ_T0025520.1 MGP_NODShiLtJ_G0017209.1 mouse_genomes_project 10 83014264 83027390 + Rab36 protein_coding retained_intron MGP_NODShiLtJ_T0025521.1 MGP_NODShiLtJ_G0017209.1 mouse_genomes_project 10 83014272 83033350 + MGP_NODShiLtJ_P0025521 Rab36 protein_coding protein_coding MGP_NODShiLtJ_T0025522.1 MGP_NODShiLtJ_G0017209.1 mouse_genomes_project 10 83014290 83032705 + MGP_NODShiLtJ_P0025522 Rab36 protein_coding protein_coding MGP_NODShiLtJ_T0025523.1 MGP_NODShiLtJ_G0017209.1 mouse_genomes_project 10 83014432 83026142 + Rab36 protein_coding retained_intron MGP_NODShiLtJ_T0025524.1 MGP_NODShiLtJ_G0017209.1 mouse_genomes_project 10 83014479 83024664 + Rab36 protein_coding retained_intron MGP_NODShiLtJ_T0025525.1 MGP_NODShiLtJ_G0017209.1 mouse_genomes_project 10 83014528 83029297 + MGP_NODShiLtJ_P0025525 Rab36 protein_coding protein_coding MGP_NODShiLtJ_T0025526.1 MGP_NODShiLtJ_G0017209.1 mouse_genomes_project 10 83015042 83032663 + MGP_NODShiLtJ_P0025526 Rab36 protein_coding protein_coding MGP_NODShiLtJ_T0025527.1 MGP_NODShiLtJ_G0017209.1 mouse_genomes_project 10 83015429 83029292 + Rab36 protein_coding retained_intron MGP_NODShiLtJ_T0025800.1 MGP_NODShiLtJ_G0017292.1 mouse_genomes_project 10 87141356 87168832 + MGP_NODShiLtJ_P0025800 Slc1a6 protein_coding protein_coding MGP_NODShiLtJ_T0009515.1 MGP_NODShiLtJ_G0007648.1 mouse_genomes_project 10 89475764 89475837 + Mir1982 miRNA miRNA MGP_NODShiLtJ_T0024732.1 MGP_NODShiLtJ_G0017007.1 mouse_genomes_project 10 38399155 38783582 + MGP_NODShiLtJ_P0024732 Hs3st5 protein_coding protein_coding MGP_NODShiLtJ_T0024733.1 MGP_NODShiLtJ_G0017007.1 mouse_genomes_project 10 38399160 38784198 + MGP_NODShiLtJ_P0024733 Hs3st5 protein_coding protein_coding MGP_NODShiLtJ_T0024734.1 MGP_NODShiLtJ_G0017007.1 mouse_genomes_project 10 38399230 38627713 + Hs3st5 protein_coding retained_intron MGP_NODShiLtJ_T0024735.1 MGP_NODShiLtJ_G0017007.1 mouse_genomes_project 10 38399367 38784206 + MGP_NODShiLtJ_P0024735 Hs3st5 protein_coding protein_coding MGP_NODShiLtJ_T0024736.1 MGP_NODShiLtJ_G0017007.1 mouse_genomes_project 10 38399748 38760332 + Hs3st5 protein_coding processed_transcript MGP_NODShiLtJ_T0026076.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009294 89036531 - MGP_NODShiLtJ_P0026076 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026077.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009294 89036541 - MGP_NODShiLtJ_P0026077 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026078.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009327 89036537 - MGP_NODShiLtJ_P0026078 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026079.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009327 89036541 - MGP_NODShiLtJ_P0026079 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026080.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009388 89036515 - MGP_NODShiLtJ_P0026080 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026081.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009388 89036515 - MGP_NODShiLtJ_P0026081 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026082.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009400 89033862 - MGP_NODShiLtJ_P0026082 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026083.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009406 89036529 - MGP_NODShiLtJ_P0026083 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026084.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009406 89036529 - MGP_NODShiLtJ_P0026084 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026085.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009834 89033932 - MGP_NODShiLtJ_P0026085 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026086.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89009834 89033835 - MGP_NODShiLtJ_P0026086 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0026087.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89012407 89015268 - Tcf3 protein_coding processed_transcript MGP_NODShiLtJ_T0026088.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89012429 89033861 - MGP_NODShiLtJ_P0026088 Tcf3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026089.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89015023 89016069 - Tcf3 protein_coding retained_intron MGP_NODShiLtJ_T0026090.1 MGP_NODShiLtJ_G0017364.1 mouse_genomes_project 10 89019863 89021641 - MGP_NODShiLtJ_P0026090 Tcf3 protein_coding protein_coding MGP_NODShiLtJ_T0025747.1 MGP_NODShiLtJ_G0017275.1 mouse_genomes_project 10 86249685 86275220 - MGP_NODShiLtJ_P0025747 Pfkl protein_coding protein_coding MGP_NODShiLtJ_T0025748.1 MGP_NODShiLtJ_G0017275.1 mouse_genomes_project 10 86253210 86254924 - Pfkl protein_coding retained_intron MGP_NODShiLtJ_T0025749.1 MGP_NODShiLtJ_G0017275.1 mouse_genomes_project 10 86262701 86265427 - Pfkl protein_coding retained_intron MGP_NODShiLtJ_T0025750.1 MGP_NODShiLtJ_G0017275.1 mouse_genomes_project 10 86266172 86276699 - Pfkl protein_coding processed_transcript MGP_NODShiLtJ_T0025573.1 MGP_NODShiLtJ_G0017220.1 mouse_genomes_project 10 83678989 83798110 - MGP_NODShiLtJ_P0025573 Cabin1 protein_coding protein_coding MGP_NODShiLtJ_T0026338.1 MGP_NODShiLtJ_G0017430.1 mouse_genomes_project 10 90344462 90349997 - MGP_NODShiLtJ_P0026338 Sirt6 protein_coding protein_coding MGP_NODShiLtJ_T0026339.1 MGP_NODShiLtJ_G0017430.1 mouse_genomes_project 10 90344464 90350474 - MGP_NODShiLtJ_P0026339 Sirt6 protein_coding protein_coding MGP_NODShiLtJ_T0026340.1 MGP_NODShiLtJ_G0017430.1 mouse_genomes_project 10 90348203 90350243 - Sirt6 protein_coding retained_intron MGP_NODShiLtJ_T0026341.1 MGP_NODShiLtJ_G0017430.1 mouse_genomes_project 10 90348455 90349934 - MGP_NODShiLtJ_P0026341 Sirt6 protein_coding protein_coding MGP_NODShiLtJ_T0024795.1 MGP_NODShiLtJ_G0017024.1 mouse_genomes_project 10 42648876 42673852 - MGP_NODShiLtJ_P0024795 Rpf2 protein_coding protein_coding MGP_NODShiLtJ_T0024796.1 MGP_NODShiLtJ_G0017024.1 mouse_genomes_project 10 42649057 42673886 - MGP_NODShiLtJ_P0024796 Rpf2 protein_coding protein_coding MGP_NODShiLtJ_T0024797.1 MGP_NODShiLtJ_G0017024.1 mouse_genomes_project 10 42649313 42653429 - Rpf2 protein_coding processed_transcript MGP_NODShiLtJ_T0024798.1 MGP_NODShiLtJ_G0017024.1 mouse_genomes_project 10 42649443 42673853 - MGP_NODShiLtJ_P0024798 Rpf2 protein_coding protein_coding MGP_NODShiLtJ_T0024799.1 MGP_NODShiLtJ_G0017024.1 mouse_genomes_project 10 42649518 42673877 - MGP_NODShiLtJ_P0024799 Rpf2 protein_coding protein_coding MGP_NODShiLtJ_T0024800.1 MGP_NODShiLtJ_G0017024.1 mouse_genomes_project 10 42650970 42673843 - MGP_NODShiLtJ_P0024800 Rpf2 protein_coding protein_coding MGP_NODShiLtJ_T0009485.1 MGP_NODShiLtJ_G0007618.1 mouse_genomes_project 10 26336953 26337075 - Gm27754 miRNA miRNA MGP_NODShiLtJ_T0099843.1 MGP_NODShiLtJ_G0038237.1 mouse_genomes_project 10 23500929 23501003 - Gm23130 snoRNA snoRNA MGP_NODShiLtJ_T0024636.1 MGP_NODShiLtJ_G0016963.1 mouse_genomes_project 10 25465110 25473619 - MGP_NODShiLtJ_P0024636 Smlr1 protein_coding protein_coding MGP_NODShiLtJ_T0024637.1 MGP_NODShiLtJ_G0016963.1 mouse_genomes_project 10 25469402 25473494 - Smlr1 protein_coding retained_intron MGP_NODShiLtJ_T0026969.1 MGP_NODShiLtJ_G0017626.1 mouse_genomes_project 10 132689391 132720868 - MGP_NODShiLtJ_P0026969 Rap1b protein_coding protein_coding MGP_NODShiLtJ_T0026474.1 MGP_NODShiLtJ_G0017471.1 mouse_genomes_project 10 95305398 95759729 - MGP_NODShiLtJ_P0026474 Syn3 protein_coding protein_coding MGP_NODShiLtJ_T0026475.1 MGP_NODShiLtJ_G0017471.1 mouse_genomes_project 10 95307696 95317297 - Syn3 protein_coding processed_transcript MGP_NODShiLtJ_T0026476.1 MGP_NODShiLtJ_G0017471.1 mouse_genomes_project 10 95320937 95752792 - Syn3 protein_coding retained_intron MGP_NODShiLtJ_T0026477.1 MGP_NODShiLtJ_G0017471.1 mouse_genomes_project 10 95531723 95759755 - MGP_NODShiLtJ_P0026477 Syn3 protein_coding protein_coding MGP_NODShiLtJ_T0026482.1 MGP_NODShiLtJ_G0017471.1 mouse_genomes_project 10 95605556 95752792 - Syn3 protein_coding retained_intron MGP_NODShiLtJ_T0026483.1 MGP_NODShiLtJ_G0017471.1 mouse_genomes_project 10 95608929 95759769 - Syn3 protein_coding retained_intron MGP_NODShiLtJ_T0101537.1 MGP_NODShiLtJ_G0039707.1 mouse_genomes_project 10 146655779 146655968 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006063.1 MGP_NODShiLtJ_G0005070.1 mouse_genomes_project 10 100899643 100900723 + Gm26765 lincRNA lincRNA MGP_NODShiLtJ_T0003005.1 MGP_NODShiLtJ_G0002804.1 mouse_genomes_project 10 84667905 84684260 - 4930483K19Rik antisense antisense MGP_NODShiLtJ_T0006026.1 MGP_NODShiLtJ_G0005040.1 mouse_genomes_project 10 42245459 42246933 - Gm26824 lincRNA lincRNA MGP_NODShiLtJ_T0002984.1 MGP_NODShiLtJ_G0002787.1 mouse_genomes_project 10 45903066 45903766 + Gm29246 antisense antisense MGP_NODShiLtJ_T0012325.1 MGP_NODShiLtJ_G0010433.1 mouse_genomes_project 10 132247105 132247613 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024770.1 MGP_NODShiLtJ_G0017016.1 mouse_genomes_project 10 41962621 42007839 + MGP_NODShiLtJ_P0024770 Traf3ip2 protein_coding protein_coding MGP_NODShiLtJ_T0024771.1 MGP_NODShiLtJ_G0017016.1 mouse_genomes_project 10 41976509 42007061 + MGP_NODShiLtJ_P0024771 Traf3ip2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024772.1 MGP_NODShiLtJ_G0017016.1 mouse_genomes_project 10 41992940 41998629 + Traf3ip2 protein_coding retained_intron MGP_NODShiLtJ_T0024773.1 MGP_NODShiLtJ_G0017016.1 mouse_genomes_project 10 41998993 42003791 + Traf3ip2 protein_coding processed_transcript MGP_NODShiLtJ_T0024774.1 MGP_NODShiLtJ_G0017016.1 mouse_genomes_project 10 41999584 42007355 + Traf3ip2 protein_coding retained_intron MGP_NODShiLtJ_T0024775.1 MGP_NODShiLtJ_G0017016.1 mouse_genomes_project 10 42003425 42007357 + Traf3ip2 protein_coding retained_intron MGP_NODShiLtJ_T0025610.1 MGP_NODShiLtJ_G0017237.1 mouse_genomes_project 10 84303814 84337648 - MGP_NODShiLtJ_P0025610 Prmt2 protein_coding protein_coding MGP_NODShiLtJ_T0025611.1 MGP_NODShiLtJ_G0017237.1 mouse_genomes_project 10 84303819 84337620 - MGP_NODShiLtJ_P0025611 Prmt2 protein_coding protein_coding MGP_NODShiLtJ_T0025612.1 MGP_NODShiLtJ_G0017237.1 mouse_genomes_project 10 84303824 84337613 - MGP_NODShiLtJ_P0025612 Prmt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025613.1 MGP_NODShiLtJ_G0017237.1 mouse_genomes_project 10 84303824 84337619 - MGP_NODShiLtJ_P0025613 Prmt2 protein_coding protein_coding MGP_NODShiLtJ_T0025614.1 MGP_NODShiLtJ_G0017237.1 mouse_genomes_project 10 84304568 84337640 - MGP_NODShiLtJ_P0025614 Prmt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025615.1 MGP_NODShiLtJ_G0017237.1 mouse_genomes_project 10 84305010 84309142 - Prmt2 protein_coding retained_intron MGP_NODShiLtJ_T0025616.1 MGP_NODShiLtJ_G0017237.1 mouse_genomes_project 10 84305036 84309828 - Prmt2 protein_coding processed_transcript MGP_NODShiLtJ_T0006043.1 MGP_NODShiLtJ_G0005053.1 mouse_genomes_project 10 73620293 73621238 + Gm28139 lincRNA lincRNA MGP_NODShiLtJ_T0026739.1 MGP_NODShiLtJ_G0017535.1 mouse_genomes_project 10 105768336 105768797 - MGP_NODShiLtJ_P0026739 Anapc15-ps protein_coding protein_coding MGP_NODShiLtJ_T0098599.1 MGP_NODShiLtJ_G0036993.1 mouse_genomes_project 10 1468420 1468580 + Gm22739 snRNA snRNA MGP_NODShiLtJ_T0011167.1 MGP_NODShiLtJ_G0009300.1 mouse_genomes_project 10 101882483 101882676 - Gm27999 misc_RNA misc_RNA MGP_NODShiLtJ_T0097885.1 MGP_NODShiLtJ_G0036297.1 mouse_genomes_project 10 118279247 118279358 - n-R5s80 rRNA rRNA MGP_NODShiLtJ_T0024705.1 MGP_NODShiLtJ_G0016990.1 mouse_genomes_project 10 34767037 34906615 - MGP_NODShiLtJ_P0024705 Clvs2 protein_coding protein_coding MGP_NODShiLtJ_T0024706.1 MGP_NODShiLtJ_G0016990.1 mouse_genomes_project 10 34798227 34906042 - Clvs2 protein_coding processed_transcript MGP_NODShiLtJ_T0024707.1 MGP_NODShiLtJ_G0016990.1 mouse_genomes_project 10 34872004 34906465 - Clvs2 protein_coding processed_transcript MGP_NODShiLtJ_T0024708.1 MGP_NODShiLtJ_G0016990.1 mouse_genomes_project 10 34876403 34906468 - MGP_NODShiLtJ_P0024708 Clvs2 protein_coding protein_coding MGP_NODShiLtJ_T0003056.1 MGP_NODShiLtJ_G0002841.1 mouse_genomes_project 10 143891704 143893350 + Gm16229 antisense antisense MGP_NODShiLtJ_T0026506.1 MGP_NODShiLtJ_G0017481.1 mouse_genomes_project 10 96813899 96816743 - MGP_NODShiLtJ_P0026506 Ascl1 protein_coding protein_coding MGP_NODShiLtJ_T0024458.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17181850 17254768 + MGP_NODShiLtJ_P0024458 Reps1 protein_coding protein_coding MGP_NODShiLtJ_T0024459.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17181895 17254782 + MGP_NODShiLtJ_P0024459 Reps1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024460.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17181929 17254793 + MGP_NODShiLtJ_P0024460 Reps1 protein_coding protein_coding MGP_NODShiLtJ_T0024461.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17181952 17254586 + MGP_NODShiLtJ_P0024461 Reps1 protein_coding protein_coding MGP_NODShiLtJ_T0024462.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17219560 17233334 + Reps1 protein_coding retained_intron MGP_NODShiLtJ_T0024463.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17221384 17232495 + MGP_NODShiLtJ_P0024463 Reps1 protein_coding protein_coding MGP_NODShiLtJ_T0024464.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17222744 17246264 + MGP_NODShiLtJ_P0024464 Reps1 protein_coding protein_coding MGP_NODShiLtJ_T0024465.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17242895 17249953 + Reps1 protein_coding retained_intron MGP_NODShiLtJ_T0024466.1 MGP_NODShiLtJ_G0016901.1 mouse_genomes_project 10 17250695 17251667 + Reps1 protein_coding retained_intron MGP_NODShiLtJ_T0024960.1 MGP_NODShiLtJ_G0017073.1 mouse_genomes_project 10 55639423 55757541 + MGP_NODShiLtJ_P0024960 Sim1 protein_coding protein_coding MGP_NODShiLtJ_T0024235.1 MGP_NODShiLtJ_G0016853.1 mouse_genomes_project 10 2918653 2925138 - MGP_NODShiLtJ_P0024235 Fbxo5 protein_coding protein_coding MGP_NODShiLtJ_T0024236.1 MGP_NODShiLtJ_G0016853.1 mouse_genomes_project 10 2921693 2924136 - Fbxo5 protein_coding processed_transcript MGP_NODShiLtJ_T0026404.1 MGP_NODShiLtJ_G0017449.1 mouse_genomes_project 10 92481425 92527692 - MGP_NODShiLtJ_P0026404 Aldh1l2 protein_coding protein_coding MGP_NODShiLtJ_T0026405.1 MGP_NODShiLtJ_G0017449.1 mouse_genomes_project 10 92484183 92486865 - Aldh1l2 protein_coding processed_transcript MGP_NODShiLtJ_T0026406.1 MGP_NODShiLtJ_G0017449.1 mouse_genomes_project 10 92485587 92488346 - Aldh1l2 protein_coding processed_transcript MGP_NODShiLtJ_T0026407.1 MGP_NODShiLtJ_G0017449.1 mouse_genomes_project 10 92485589 92527759 - Aldh1l2 protein_coding retained_intron MGP_NODShiLtJ_T0026408.1 MGP_NODShiLtJ_G0017449.1 mouse_genomes_project 10 92491774 92501263 - Aldh1l2 protein_coding processed_transcript MGP_NODShiLtJ_T0026409.1 MGP_NODShiLtJ_G0017449.1 mouse_genomes_project 10 92495937 92506863 - Aldh1l2 protein_coding processed_transcript MGP_NODShiLtJ_T0026681.1 MGP_NODShiLtJ_G0017520.1 mouse_genomes_project 10 103764588 103783776 + MGP_NODShiLtJ_P0026681 Usp44 protein_coding protein_coding MGP_NODShiLtJ_T0025243.1 MGP_NODShiLtJ_G0017158.1 mouse_genomes_project 10 68725998 68727832 + MGP_NODShiLtJ_P0025243 4930507D05Rik protein_coding protein_coding MGP_NODShiLtJ_T0024935.1 MGP_NODShiLtJ_G0017065.1 mouse_genomes_project 10 47303844 47326251 - MGP_NODShiLtJ_P0024935 Prdm1 protein_coding protein_coding MGP_NODShiLtJ_T0024936.1 MGP_NODShiLtJ_G0017065.1 mouse_genomes_project 10 47304960 47326190 - MGP_NODShiLtJ_P0024936 Prdm1 protein_coding protein_coding MGP_NODShiLtJ_T0024937.1 MGP_NODShiLtJ_G0017065.1 mouse_genomes_project 10 47306334 47324713 - MGP_NODShiLtJ_P0024937 Prdm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024938.1 MGP_NODShiLtJ_G0017065.1 mouse_genomes_project 10 47314226 47397704 - Prdm1 protein_coding processed_transcript MGP_NODShiLtJ_T0024909.1 MGP_NODShiLtJ_G0017054.1 mouse_genomes_project 10 45720310 45904338 - MGP_NODShiLtJ_P0024909 Sobp protein_coding protein_coding MGP_NODShiLtJ_T0024910.1 MGP_NODShiLtJ_G0017054.1 mouse_genomes_project 10 45902777 45904329 - MGP_NODShiLtJ_P0024910 Sobp protein_coding protein_coding MGP_NODShiLtJ_T0026444.1 MGP_NODShiLtJ_G0017461.1 mouse_genomes_project 10 94252787 94261382 - MGP_NODShiLtJ_P0026444 Mterf2 protein_coding protein_coding MGP_NODShiLtJ_T0012261.1 MGP_NODShiLtJ_G0010369.1 mouse_genomes_project 10 938159 938603 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025912.1 MGP_NODShiLtJ_G0017328.1 mouse_genomes_project 10 88427916 88429720 + MGP_NODShiLtJ_P0025912 Cfd protein_coding protein_coding MGP_NODShiLtJ_T0025590.1 MGP_NODShiLtJ_G0017228.1 mouse_genomes_project 10 83952003 83954547 + MGP_NODShiLtJ_P0025590 Derl3 protein_coding protein_coding MGP_NODShiLtJ_T0025814.1 MGP_NODShiLtJ_G0017300.1 mouse_genomes_project 10 87422698 87423778 + MGP_NODShiLtJ_P0025814 Olfr57 protein_coding protein_coding MGP_NODShiLtJ_T0024926.1 MGP_NODShiLtJ_G0017061.1 mouse_genomes_project 10 46663944 46693867 - MGP_NODShiLtJ_P0024926 Qrsl1 protein_coding protein_coding MGP_NODShiLtJ_T0024927.1 MGP_NODShiLtJ_G0017061.1 mouse_genomes_project 10 46664178 46666861 - Qrsl1 protein_coding retained_intron MGP_NODShiLtJ_T0024928.1 MGP_NODShiLtJ_G0017061.1 mouse_genomes_project 10 46664239 46693852 - MGP_NODShiLtJ_P0024928 Qrsl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024929.1 MGP_NODShiLtJ_G0017061.1 mouse_genomes_project 10 46671049 46693867 - Qrsl1 protein_coding retained_intron MGP_NODShiLtJ_T0012262.1 MGP_NODShiLtJ_G0010370.1 mouse_genomes_project 10 5047697 5048427 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009543.1 MGP_NODShiLtJ_G0007676.1 mouse_genomes_project 10 138088718 138088819 + Mir8104 miRNA miRNA MGP_NODShiLtJ_T0011174.1 MGP_NODShiLtJ_G0009307.1 mouse_genomes_project 10 104967528 104967832 + Gm25266 misc_RNA misc_RNA MGP_NODShiLtJ_T0012274.1 MGP_NODShiLtJ_G0010382.1 mouse_genomes_project 10 21838379 21895335 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097742.1 MGP_NODShiLtJ_G0036154.1 mouse_genomes_project 10 131241282 131243526 + pseudogene pseudogene MGP_NODShiLtJ_T0006018.1 MGP_NODShiLtJ_G0005033.1 mouse_genomes_project 10 21091272 21114960 + Gm5420 lincRNA lincRNA MGP_NODShiLtJ_T0006019.1 MGP_NODShiLtJ_G0005033.1 mouse_genomes_project 10 21095704 21097331 + Gm5420 lincRNA lincRNA MGP_NODShiLtJ_T0025617.1 MGP_NODShiLtJ_G0017238.1 mouse_genomes_project 10 84353674 84360969 + MGP_NODShiLtJ_P0025617 S100b protein_coding protein_coding MGP_NODShiLtJ_T0009522.1 MGP_NODShiLtJ_G0007655.1 mouse_genomes_project 10 94432768 94432868 - Gm27392 miRNA miRNA MGP_NODShiLtJ_T0027081.1 MGP_NODShiLtJ_G0017662.1 mouse_genomes_project 10 143199340 143201109 + MGP_NODShiLtJ_P0027081 Mettl1 protein_coding protein_coding MGP_NODShiLtJ_T0027082.1 MGP_NODShiLtJ_G0017662.1 mouse_genomes_project 10 143199858 143203826 + MGP_NODShiLtJ_P0027082 Mettl1 protein_coding protein_coding MGP_NODShiLtJ_T0027083.1 MGP_NODShiLtJ_G0017662.1 mouse_genomes_project 10 143199883 143201929 + Mettl1 protein_coding retained_intron MGP_NODShiLtJ_T0027084.1 MGP_NODShiLtJ_G0017662.1 mouse_genomes_project 10 143199884 143203579 + MGP_NODShiLtJ_P0027084 Mettl1 protein_coding protein_coding MGP_NODShiLtJ_T0027085.1 MGP_NODShiLtJ_G0017662.1 mouse_genomes_project 10 143199909 143205275 + MGP_NODShiLtJ_P0027085 Mettl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0012326.1 MGP_NODShiLtJ_G0010434.1 mouse_genomes_project 10 132414931 132415661 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027349.1 MGP_NODShiLtJ_G0017752.1 mouse_genomes_project 10 145360023 145384620 + MGP_NODShiLtJ_P0027349 Itga7 protein_coding protein_coding MGP_NODShiLtJ_T0025940.1 MGP_NODShiLtJ_G0017338.1 mouse_genomes_project 10 88541639 88560772 + MGP_NODShiLtJ_P0025940 Abca7 protein_coding protein_coding MGP_NODShiLtJ_T0025941.1 MGP_NODShiLtJ_G0017338.1 mouse_genomes_project 10 88542721 88560753 + MGP_NODShiLtJ_P0025941 Abca7 protein_coding protein_coding MGP_NODShiLtJ_T0025942.1 MGP_NODShiLtJ_G0017338.1 mouse_genomes_project 10 88542760 88560768 + MGP_NODShiLtJ_P0025942 Abca7 protein_coding protein_coding MGP_NODShiLtJ_T0098603.1 MGP_NODShiLtJ_G0036997.1 mouse_genomes_project 10 10292741 10292906 + Gm23680 snRNA snRNA MGP_NODShiLtJ_T0026941.1 MGP_NODShiLtJ_G0017617.1 mouse_genomes_project 10 131999334 132005752 - MGP_NODShiLtJ_P0026941 9530003J23Rik protein_coding protein_coding MGP_NODShiLtJ_T0026942.1 MGP_NODShiLtJ_G0017617.1 mouse_genomes_project 10 132000858 132005801 - MGP_NODShiLtJ_P0026942 9530003J23Rik protein_coding protein_coding MGP_NODShiLtJ_T0012296.1 MGP_NODShiLtJ_G0010404.1 mouse_genomes_project 10 67476993 67477358 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027108.1 MGP_NODShiLtJ_G0017672.1 mouse_genomes_project 10 143359887 143368076 - MGP_NODShiLtJ_P0027108 Dtx3 protein_coding protein_coding MGP_NODShiLtJ_T0027109.1 MGP_NODShiLtJ_G0017672.1 mouse_genomes_project 10 143359887 143368076 - MGP_NODShiLtJ_P0027109 Dtx3 protein_coding protein_coding MGP_NODShiLtJ_T0027110.1 MGP_NODShiLtJ_G0017672.1 mouse_genomes_project 10 143360150 143368094 - MGP_NODShiLtJ_P0027110 Dtx3 protein_coding protein_coding MGP_NODShiLtJ_T0027111.1 MGP_NODShiLtJ_G0017672.1 mouse_genomes_project 10 143360334 143366839 - MGP_NODShiLtJ_P0027111 Dtx3 protein_coding protein_coding MGP_NODShiLtJ_T0027112.1 MGP_NODShiLtJ_G0017672.1 mouse_genomes_project 10 143363446 143368095 - MGP_NODShiLtJ_P0027112 Dtx3 protein_coding protein_coding MGP_NODShiLtJ_T0027113.1 MGP_NODShiLtJ_G0017672.1 mouse_genomes_project 10 143363975 143368086 - Dtx3 protein_coding retained_intron MGP_NODShiLtJ_T0099830.1 MGP_NODShiLtJ_G0038224.1 mouse_genomes_project 10 5308536 5308657 - Gm24726 snoRNA snoRNA MGP_NODShiLtJ_T0025528.1 MGP_NODShiLtJ_G0017210.1 mouse_genomes_project 10 83040354 83166890 + MGP_NODShiLtJ_P0025528 Bcr protein_coding protein_coding MGP_NODShiLtJ_T0012263.1 MGP_NODShiLtJ_G0010371.1 mouse_genomes_project 10 5262794 5263437 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024959.1 MGP_NODShiLtJ_G0017072.1 mouse_genomes_project 10 55279912 55591970 + MGP_NODShiLtJ_P0024959 Ascc3 protein_coding protein_coding MGP_NODShiLtJ_T0027364.1 MGP_NODShiLtJ_G0017764.1 mouse_genomes_project 10 145706279 145707218 + MGP_NODShiLtJ_P0027364 Olfr775 protein_coding protein_coding MGP_NODShiLtJ_T0026303.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90292675 90309809 + Tle2 protein_coding retained_intron MGP_NODShiLtJ_T0026304.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90292848 90295175 + MGP_NODShiLtJ_P0026304 Tle2 protein_coding protein_coding MGP_NODShiLtJ_T0026305.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90292853 90299668 + MGP_NODShiLtJ_P0026305 Tle2 protein_coding protein_coding MGP_NODShiLtJ_T0026306.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90294602 90309813 + Tle2 protein_coding retained_intron MGP_NODShiLtJ_T0026307.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90294604 90309816 + MGP_NODShiLtJ_P0026307 Tle2 protein_coding protein_coding MGP_NODShiLtJ_T0026308.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90294673 90309816 + MGP_NODShiLtJ_P0026308 Tle2 protein_coding protein_coding MGP_NODShiLtJ_T0026309.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90294759 90309811 + Tle2 protein_coding retained_intron MGP_NODShiLtJ_T0026310.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90294841 90299978 + MGP_NODShiLtJ_P0026310 Tle2 protein_coding protein_coding MGP_NODShiLtJ_T0026311.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90294874 90310188 + MGP_NODShiLtJ_P0026311 Tle2 protein_coding protein_coding MGP_NODShiLtJ_T0026312.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90300176 90306270 + Tle2 protein_coding retained_intron MGP_NODShiLtJ_T0026313.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90301885 90306227 + Tle2 protein_coding retained_intron MGP_NODShiLtJ_T0026314.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90306434 90307289 + Tle2 protein_coding retained_intron MGP_NODShiLtJ_T0026315.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90306768 90309766 + Tle2 protein_coding retained_intron MGP_NODShiLtJ_T0026316.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90307311 90309816 + MGP_NODShiLtJ_P0026316 Tle2 protein_coding protein_coding MGP_NODShiLtJ_T0026317.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90307341 90309816 + MGP_NODShiLtJ_P0026317 Tle2 protein_coding protein_coding MGP_NODShiLtJ_T0026318.1 MGP_NODShiLtJ_G0017427.1 mouse_genomes_project 10 90307983 90309644 + Tle2 protein_coding retained_intron MGP_NODShiLtJ_T0024592.1 MGP_NODShiLtJ_G0016945.1 mouse_genomes_project 10 23697720 23698734 + MGP_NODShiLtJ_P0024592 Taar5 protein_coding protein_coding MGP_NODShiLtJ_T0024514.1 MGP_NODShiLtJ_G0016918.1 mouse_genomes_project 10 19406645 19548368 + MGP_NODShiLtJ_P0024514 Map7 protein_coding protein_coding MGP_NODShiLtJ_T0024515.1 MGP_NODShiLtJ_G0016918.1 mouse_genomes_project 10 19407103 19551258 + MGP_NODShiLtJ_P0024515 Map7 protein_coding protein_coding MGP_NODShiLtJ_T0012297.1 MGP_NODShiLtJ_G0010405.1 mouse_genomes_project 10 67476996 67477358 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024718.1 MGP_NODShiLtJ_G0016998.1 mouse_genomes_project 10 35397395 35402925 - MGP_NODShiLtJ_P0024718 Fam26d protein_coding protein_coding MGP_NODShiLtJ_T0025057.1 MGP_NODShiLtJ_G0017109.1 mouse_genomes_project 10 64501048 64580777 - MGP_NODShiLtJ_P0025057 Edar protein_coding protein_coding MGP_NODShiLtJ_T0026903.1 MGP_NODShiLtJ_G0017602.1 mouse_genomes_project 10 130115846 130129659 + MGP_NODShiLtJ_P0026903 A930009A15Rik protein_coding protein_coding MGP_NODShiLtJ_T0101527.1 MGP_NODShiLtJ_G0039697.1 mouse_genomes_project 10 86847819 86848757 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012301.1 MGP_NODShiLtJ_G0010409.1 mouse_genomes_project 10 80901765 80902831 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012276.1 MGP_NODShiLtJ_G0010384.1 mouse_genomes_project 10 24409453 24410277 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027335.1 MGP_NODShiLtJ_G0017749.1 mouse_genomes_project 10 145334927 145338831 + MGP_NODShiLtJ_P0027335 Cd63 protein_coding protein_coding MGP_NODShiLtJ_T0027336.1 MGP_NODShiLtJ_G0017749.1 mouse_genomes_project 10 145335874 145338831 + MGP_NODShiLtJ_P0027336 Cd63 protein_coding protein_coding MGP_NODShiLtJ_T0027351.1 MGP_NODShiLtJ_G0017754.1 mouse_genomes_project 10 145433044 145434415 + MGP_NODShiLtJ_P0027351 Olfr9 protein_coding protein_coding MGP_NODShiLtJ_T0026519.1 MGP_NODShiLtJ_G0017484.1 mouse_genomes_project 10 97491117 97492421 + MGP_NODShiLtJ_P0026519 Pmch protein_coding protein_coding MGP_NODShiLtJ_T0026122.1 MGP_NODShiLtJ_G0017377.1 mouse_genomes_project 10 89343304 89381299 - MGP_NODShiLtJ_P0026122 Ap3d1 protein_coding protein_coding MGP_NODShiLtJ_T0006010.1 MGP_NODShiLtJ_G0005028.1 mouse_genomes_project 10 10891474 10897956 - B230208H11Rik lincRNA lincRNA MGP_NODShiLtJ_T0006011.1 MGP_NODShiLtJ_G0005028.1 mouse_genomes_project 10 10891505 10897946 - B230208H11Rik lincRNA lincRNA MGP_NODShiLtJ_T0025260.1 MGP_NODShiLtJ_G0017163.1 mouse_genomes_project 10 68901836 68944994 - MGP_NODShiLtJ_P0025260 Ddx50 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025261.1 MGP_NODShiLtJ_G0017163.1 mouse_genomes_project 10 68901839 68944707 - MGP_NODShiLtJ_P0025261 Ddx50 protein_coding protein_coding MGP_NODShiLtJ_T0027127.1 MGP_NODShiLtJ_G0017678.1 mouse_genomes_project 10 143477399 143492876 - MGP_NODShiLtJ_P0027127 Mars protein_coding protein_coding MGP_NODShiLtJ_T0027128.1 MGP_NODShiLtJ_G0017678.1 mouse_genomes_project 10 143477400 143492876 - MGP_NODShiLtJ_P0027128 Mars protein_coding protein_coding MGP_NODShiLtJ_T0027129.1 MGP_NODShiLtJ_G0017678.1 mouse_genomes_project 10 143477404 143492768 - Mars protein_coding retained_intron MGP_NODShiLtJ_T0027130.1 MGP_NODShiLtJ_G0017678.1 mouse_genomes_project 10 143477404 143478935 - MGP_NODShiLtJ_P0027130 Mars protein_coding protein_coding MGP_NODShiLtJ_T0027131.1 MGP_NODShiLtJ_G0017678.1 mouse_genomes_project 10 143477527 143478846 - Mars protein_coding retained_intron MGP_NODShiLtJ_T0027132.1 MGP_NODShiLtJ_G0017678.1 mouse_genomes_project 10 143489128 143490066 - Mars protein_coding retained_intron MGP_NODShiLtJ_T0027028.1 MGP_NODShiLtJ_G0017644.1 mouse_genomes_project 10 136695444 136774807 - MGP_NODShiLtJ_P0027028 Rassf3 protein_coding protein_coding MGP_NODShiLtJ_T0003042.1 MGP_NODShiLtJ_G0002832.1 mouse_genomes_project 10 131125629 131127449 + Kcnmb4os2 antisense antisense MGP_NODShiLtJ_T0003043.1 MGP_NODShiLtJ_G0002832.1 mouse_genomes_project 10 131126494 131127786 + Kcnmb4os2 antisense antisense MGP_NODShiLtJ_T0003044.1 MGP_NODShiLtJ_G0002832.1 mouse_genomes_project 10 131126811 131127454 + Kcnmb4os2 antisense antisense MGP_NODShiLtJ_T0012281.1 MGP_NODShiLtJ_G0010389.1 mouse_genomes_project 10 42121471 42122081 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098612.1 MGP_NODShiLtJ_G0037006.1 mouse_genomes_project 10 40860898 40861005 - Gm22911 snRNA snRNA MGP_NODShiLtJ_T0024548.1 MGP_NODShiLtJ_G0016928.1 mouse_genomes_project 10 20999285 21028604 + MGP_NODShiLtJ_P0024548 1700020N01Rik protein_coding protein_coding MGP_NODShiLtJ_T0024549.1 MGP_NODShiLtJ_G0016928.1 mouse_genomes_project 10 21022547 21027993 + 1700020N01Rik protein_coding processed_transcript MGP_NODShiLtJ_T0026253.1 MGP_NODShiLtJ_G0017415.1 mouse_genomes_project 10 90043802 90052533 + MGP_NODShiLtJ_P0026253 Mfsd12 protein_coding protein_coding MGP_NODShiLtJ_T0026254.1 MGP_NODShiLtJ_G0017415.1 mouse_genomes_project 10 90043863 90047541 + MGP_NODShiLtJ_P0026254 Mfsd12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027061.1 MGP_NODShiLtJ_G0017654.1 mouse_genomes_project 10 138724443 139284776 + MGP_NODShiLtJ_P0027061 Fam19a2 protein_coding protein_coding MGP_NODShiLtJ_T0099870.1 MGP_NODShiLtJ_G0038264.1 mouse_genomes_project 10 89855553 89855617 + Snord37 snoRNA snoRNA MGP_NODShiLtJ_T0025452.1 MGP_NODShiLtJ_G0017202.1 mouse_genomes_project 10 78703298 78739104 - MGP_NODShiLtJ_P0025452 Ube2d1 protein_coding protein_coding MGP_NODShiLtJ_T0025453.1 MGP_NODShiLtJ_G0017202.1 mouse_genomes_project 10 78703976 78707375 - Ube2d1 protein_coding retained_intron MGP_NODShiLtJ_T0025454.1 MGP_NODShiLtJ_G0017202.1 mouse_genomes_project 10 78708192 78739060 - Ube2d1 protein_coding retained_intron MGP_NODShiLtJ_T0025602.1 MGP_NODShiLtJ_G0017231.1 mouse_genomes_project 10 83994606 83996759 + MGP_NODShiLtJ_P0025602 Chchd10 protein_coding protein_coding MGP_NODShiLtJ_T0025987.1 MGP_NODShiLtJ_G0017345.1 mouse_genomes_project 10 88696398 88700166 + Atp5d protein_coding processed_transcript MGP_NODShiLtJ_T0025988.1 MGP_NODShiLtJ_G0017345.1 mouse_genomes_project 10 88697316 88703588 + MGP_NODShiLtJ_P0025988 Atp5d protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025989.1 MGP_NODShiLtJ_G0017345.1 mouse_genomes_project 10 88699222 88703579 + MGP_NODShiLtJ_P0025989 Atp5d protein_coding protein_coding MGP_NODShiLtJ_T0025990.1 MGP_NODShiLtJ_G0017345.1 mouse_genomes_project 10 88700080 88703584 + MGP_NODShiLtJ_P0025990 Atp5d protein_coding protein_coding MGP_NODShiLtJ_T0025991.1 MGP_NODShiLtJ_G0017345.1 mouse_genomes_project 10 88700135 88703578 + MGP_NODShiLtJ_P0025991 Atp5d protein_coding protein_coding MGP_NODShiLtJ_T0025312.1 MGP_NODShiLtJ_G0017176.1 mouse_genomes_project 10 69785778 69806150 + Dnajc12 protein_coding retained_intron MGP_NODShiLtJ_T0025313.1 MGP_NODShiLtJ_G0017176.1 mouse_genomes_project 10 69785905 69805606 + MGP_NODShiLtJ_P0025313 Dnajc12 protein_coding protein_coding MGP_NODShiLtJ_T0027196.1 MGP_NODShiLtJ_G0017696.1 mouse_genomes_project 10 143997313 144006182 + MGP_NODShiLtJ_P0027196 protein_coding protein_coding MGP_NODShiLtJ_T0027042.1 MGP_NODShiLtJ_G0017649.1 mouse_genomes_project 10 137454279 137472809 - MGP_NODShiLtJ_P0027042 Tmem5 protein_coding protein_coding MGP_NODShiLtJ_T0027043.1 MGP_NODShiLtJ_G0017649.1 mouse_genomes_project 10 137456988 137472594 - MGP_NODShiLtJ_P0027043 Tmem5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027044.1 MGP_NODShiLtJ_G0017649.1 mouse_genomes_project 10 137457410 137464836 - Tmem5 protein_coding retained_intron MGP_NODShiLtJ_T0027045.1 MGP_NODShiLtJ_G0017649.1 mouse_genomes_project 10 137464091 137466152 - Tmem5 protein_coding retained_intron MGP_NODShiLtJ_T0027046.1 MGP_NODShiLtJ_G0017649.1 mouse_genomes_project 10 137464468 137471583 - Tmem5 protein_coding retained_intron MGP_NODShiLtJ_T0027047.1 MGP_NODShiLtJ_G0017649.1 mouse_genomes_project 10 137471502 137472564 - Tmem5 protein_coding processed_transcript MGP_NODShiLtJ_T0011171.1 MGP_NODShiLtJ_G0009304.1 mouse_genomes_project 10 101942083 101942209 - Gm27582 misc_RNA misc_RNA MGP_NODShiLtJ_T0026205.1 MGP_NODShiLtJ_G0017405.1 mouse_genomes_project 10 89912868 89932753 + MGP_NODShiLtJ_P0026205 Zfr2 protein_coding protein_coding MGP_NODShiLtJ_T0026206.1 MGP_NODShiLtJ_G0017405.1 mouse_genomes_project 10 89912868 89917267 + MGP_NODShiLtJ_P0026206 Zfr2 protein_coding protein_coding MGP_NODShiLtJ_T0026207.1 MGP_NODShiLtJ_G0017405.1 mouse_genomes_project 10 89912889 89917291 + Zfr2 protein_coding processed_transcript MGP_NODShiLtJ_T0026208.1 MGP_NODShiLtJ_G0017405.1 mouse_genomes_project 10 89912889 89923052 + Zfr2 protein_coding retained_intron MGP_NODShiLtJ_T0026209.1 MGP_NODShiLtJ_G0017405.1 mouse_genomes_project 10 89912900 89932751 + Zfr2 protein_coding retained_intron MGP_NODShiLtJ_T0026210.1 MGP_NODShiLtJ_G0017405.1 mouse_genomes_project 10 89929045 89932342 + MGP_NODShiLtJ_P0026210 Zfr2 protein_coding protein_coding MGP_NODShiLtJ_T0026211.1 MGP_NODShiLtJ_G0017405.1 mouse_genomes_project 10 89929680 89931176 + Zfr2 protein_coding retained_intron MGP_NODShiLtJ_T0024803.1 MGP_NODShiLtJ_G0017027.1 mouse_genomes_project 10 42809744 42950650 + MGP_NODShiLtJ_P0024803 Cdk19 protein_coding protein_coding MGP_NODShiLtJ_T0099851.1 MGP_NODShiLtJ_G0038245.1 mouse_genomes_project 10 42508947 42509076 + Gm25613 snoRNA snoRNA MGP_NODShiLtJ_T0027246.1 MGP_NODShiLtJ_G0017713.1 mouse_genomes_project 10 144543037 144549012 + MGP_NODShiLtJ_P0027246 Mip protein_coding protein_coding MGP_NODShiLtJ_T0025040.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64114610 64128900 + MGP_NODShiLtJ_P0025040 Gcc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025041.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64114632 64175676 + MGP_NODShiLtJ_P0025041 Gcc2 protein_coding protein_coding MGP_NODShiLtJ_T0025042.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64114668 64176034 + MGP_NODShiLtJ_P0025042 Gcc2 protein_coding protein_coding MGP_NODShiLtJ_T0025043.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64114815 64128772 + MGP_NODShiLtJ_P0025043 Gcc2 protein_coding protein_coding MGP_NODShiLtJ_T0025044.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64114993 64127483 + Gcc2 protein_coding processed_transcript MGP_NODShiLtJ_T0025045.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64132882 64140086 + Gcc2 protein_coding retained_intron MGP_NODShiLtJ_T0025046.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64134393 64150870 + MGP_NODShiLtJ_P0025046 Gcc2 protein_coding protein_coding MGP_NODShiLtJ_T0025047.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64155561 64162403 + Gcc2 protein_coding retained_intron MGP_NODShiLtJ_T0025048.1 MGP_NODShiLtJ_G0017105.1 mouse_genomes_project 10 64168044 64176023 + Gcc2 protein_coding retained_intron MGP_NODShiLtJ_T0025605.1 MGP_NODShiLtJ_G0017233.1 mouse_genomes_project 10 84013685 84074326 + MGP_NODShiLtJ_P0025605 Gm5134 protein_coding protein_coding MGP_NODShiLtJ_T0025606.1 MGP_NODShiLtJ_G0017233.1 mouse_genomes_project 10 84038661 84063089 + Gm5134 protein_coding retained_intron MGP_NODShiLtJ_T0099886.1 MGP_NODShiLtJ_G0038280.1 mouse_genomes_project 10 131944577 131944654 - Gm26311 snoRNA snoRNA MGP_NODShiLtJ_T0027245.1 MGP_NODShiLtJ_G0017712.1 mouse_genomes_project 10 144526267 144528154 - MGP_NODShiLtJ_P0027245 Spryd4 protein_coding protein_coding MGP_NODShiLtJ_T0024884.1 MGP_NODShiLtJ_G0017049.1 mouse_genomes_project 10 45167877 45202204 + MGP_NODShiLtJ_P0024884 Snx3 protein_coding protein_coding MGP_NODShiLtJ_T0024885.1 MGP_NODShiLtJ_G0017049.1 mouse_genomes_project 10 45167878 45202787 + MGP_NODShiLtJ_P0024885 Snx3 protein_coding protein_coding MGP_NODShiLtJ_T0024886.1 MGP_NODShiLtJ_G0017049.1 mouse_genomes_project 10 45168137 45202798 + MGP_NODShiLtJ_P0024886 Snx3 protein_coding protein_coding MGP_NODShiLtJ_T0006064.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101877702 101910918 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006065.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101877708 101878383 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006066.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101877796 101910771 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006067.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101882437 101882944 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006068.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101889141 101972651 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006069.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101889141 101973051 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006070.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101891282 101972569 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006071.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101942140 101973048 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006072.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101943851 101945189 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006073.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101943871 101971066 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006074.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101943897 101972852 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006076.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101970026 101970086 - Rmst lincRNA misc_RNA MGP_NODShiLtJ_T0006077.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101970026 101970684 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0006078.1 MGP_NODShiLtJ_G0005071.1 mouse_genomes_project 10 101970069 101973051 - Rmst lincRNA lincRNA MGP_NODShiLtJ_T0025807.1 MGP_NODShiLtJ_G0017297.1 mouse_genomes_project 10 87341936 87351508 + MGP_NODShiLtJ_P0025807 Olfr1353 protein_coding protein_coding MGP_NODShiLtJ_T0025808.1 MGP_NODShiLtJ_G0017297.1 mouse_genomes_project 10 87341950 87350830 + MGP_NODShiLtJ_P0025808 Olfr1353 protein_coding protein_coding MGP_NODShiLtJ_T0025809.1 MGP_NODShiLtJ_G0017297.1 mouse_genomes_project 10 87350493 87351508 + MGP_NODShiLtJ_P0025809 Olfr1353 protein_coding protein_coding MGP_NODShiLtJ_T0098641.1 MGP_NODShiLtJ_G0037035.1 mouse_genomes_project 10 97566444 97566559 - Gm26357 snRNA snRNA MGP_NODShiLtJ_T0026135.1 MGP_NODShiLtJ_G0017381.1 mouse_genomes_project 10 89448148 89450569 + MGP_NODShiLtJ_P0026135 Amh protein_coding protein_coding MGP_NODShiLtJ_T0025547.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83589381 83604018 + MGP_NODShiLtJ_P0025547 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025548.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83589432 83604065 + MGP_NODShiLtJ_P0025548 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025549.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83591925 83602102 + MGP_NODShiLtJ_P0025549 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025550.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83591932 83604018 + MGP_NODShiLtJ_P0025550 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025551.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83594070 83606680 + MGP_NODShiLtJ_P0025551 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025552.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83594075 83607128 + MGP_NODShiLtJ_P0025552 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025553.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83596411 83607045 + MGP_NODShiLtJ_P0025553 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025554.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83596418 83604065 + MGP_NODShiLtJ_P0025554 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025555.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83596433 83613963 + MGP_NODShiLtJ_P0025555 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025556.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83596434 83603817 + MGP_NODShiLtJ_P0025556 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025557.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83596439 83604065 + MGP_NODShiLtJ_P0025557 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025558.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83596451 83603732 + MGP_NODShiLtJ_P0025558 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025559.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83599301 83606683 + MGP_NODShiLtJ_P0025559 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025560.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83599306 83607123 + MGP_NODShiLtJ_P0025560 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025561.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83599345 83609196 + Ggt1 protein_coding processed_transcript MGP_NODShiLtJ_T0025562.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83601223 83613945 + MGP_NODShiLtJ_P0025562 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025563.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83601661 83607146 + MGP_NODShiLtJ_P0025563 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025564.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83603838 83612666 + MGP_NODShiLtJ_P0025564 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025565.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83609132 83613921 + MGP_NODShiLtJ_P0025565 Ggt1 protein_coding protein_coding MGP_NODShiLtJ_T0025566.1 MGP_NODShiLtJ_G0017217.1 mouse_genomes_project 10 83612867 83613954 + Ggt1 protein_coding retained_intron MGP_NODShiLtJ_T0026136.1 MGP_NODShiLtJ_G0017382.1 mouse_genomes_project 10 89451562 89454922 - MGP_NODShiLtJ_P0026136 Jsrp1 protein_coding protein_coding MGP_NODShiLtJ_T0026137.1 MGP_NODShiLtJ_G0017382.1 mouse_genomes_project 10 89451564 89456529 - MGP_NODShiLtJ_P0026137 Jsrp1 protein_coding protein_coding MGP_NODShiLtJ_T0026138.1 MGP_NODShiLtJ_G0017382.1 mouse_genomes_project 10 89451567 89456532 - MGP_NODShiLtJ_P0026138 Jsrp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026139.1 MGP_NODShiLtJ_G0017382.1 mouse_genomes_project 10 89453219 89456535 - MGP_NODShiLtJ_P0026139 Jsrp1 protein_coding protein_coding MGP_NODShiLtJ_T0099878.1 MGP_NODShiLtJ_G0038272.1 mouse_genomes_project 10 118424080 118424212 - Gm24237 snoRNA snoRNA MGP_NODShiLtJ_T0024691.1 MGP_NODShiLtJ_G0016983.1 mouse_genomes_project 10 31522760 31533205 - MGP_NODShiLtJ_P0024691 Hey2 protein_coding protein_coding MGP_NODShiLtJ_T0009486.1 MGP_NODShiLtJ_G0007619.1 mouse_genomes_project 10 28541950 28542033 - Gm22370 miRNA miRNA MGP_NODShiLtJ_T0024580.1 MGP_NODShiLtJ_G0016938.1 mouse_genomes_project 10 23511645 23560598 + MGP_NODShiLtJ_P0024580 Slc18b1 protein_coding protein_coding MGP_NODShiLtJ_T0024581.1 MGP_NODShiLtJ_G0016938.1 mouse_genomes_project 10 23511645 23560598 + MGP_NODShiLtJ_P0024581 Slc18b1 protein_coding protein_coding MGP_NODShiLtJ_T0024582.1 MGP_NODShiLtJ_G0016938.1 mouse_genomes_project 10 23511711 23521863 + MGP_NODShiLtJ_P0024582 Slc18b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024583.1 MGP_NODShiLtJ_G0016938.1 mouse_genomes_project 10 23511859 23521815 + MGP_NODShiLtJ_P0024583 Slc18b1 protein_coding protein_coding MGP_NODShiLtJ_T0024584.1 MGP_NODShiLtJ_G0016938.1 mouse_genomes_project 10 23521879 23539952 + MGP_NODShiLtJ_P0024584 Slc18b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024585.1 MGP_NODShiLtJ_G0016938.1 mouse_genomes_project 10 23556874 23559469 + Slc18b1 protein_coding retained_intron MGP_NODShiLtJ_T0024287.1 MGP_NODShiLtJ_G0016860.1 mouse_genomes_project 10 5028266 5050180 + MGP_NODShiLtJ_P0024287 Lrp11 protein_coding protein_coding MGP_NODShiLtJ_T0024288.1 MGP_NODShiLtJ_G0016860.1 mouse_genomes_project 10 5028283 5072178 + MGP_NODShiLtJ_P0024288 Lrp11 protein_coding protein_coding MGP_NODShiLtJ_T0024289.1 MGP_NODShiLtJ_G0016860.1 mouse_genomes_project 10 5028445 5072178 + MGP_NODShiLtJ_P0024289 Lrp11 protein_coding protein_coding MGP_NODShiLtJ_T0024290.1 MGP_NODShiLtJ_G0016860.1 mouse_genomes_project 10 5028593 5070717 + MGP_NODShiLtJ_P0024290 Lrp11 protein_coding protein_coding MGP_NODShiLtJ_T0024291.1 MGP_NODShiLtJ_G0016860.1 mouse_genomes_project 10 5035051 5070447 + MGP_NODShiLtJ_P0024291 Lrp11 protein_coding protein_coding MGP_NODShiLtJ_T0026240.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90031900 90036333 - MGP_NODShiLtJ_P0026240 Hmg20b protein_coding protein_coding MGP_NODShiLtJ_T0026241.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90031903 90036222 - Hmg20b protein_coding retained_intron MGP_NODShiLtJ_T0026242.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90031903 90036279 - MGP_NODShiLtJ_P0026242 Hmg20b protein_coding protein_coding MGP_NODShiLtJ_T0026243.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90031903 90036277 - MGP_NODShiLtJ_P0026243 Hmg20b protein_coding protein_coding MGP_NODShiLtJ_T0026244.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90031903 90036044 - MGP_NODShiLtJ_P0026244 Hmg20b protein_coding protein_coding MGP_NODShiLtJ_T0026245.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90031904 90032583 - Hmg20b protein_coding retained_intron MGP_NODShiLtJ_T0026246.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90031904 90036180 - MGP_NODShiLtJ_P0026246 Hmg20b protein_coding protein_coding MGP_NODShiLtJ_T0026247.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90032611 90034938 - MGP_NODShiLtJ_P0026247 Hmg20b protein_coding protein_coding MGP_NODShiLtJ_T0026248.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90032849 90036296 - MGP_NODShiLtJ_P0026248 Hmg20b protein_coding protein_coding MGP_NODShiLtJ_T0026249.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90032850 90033775 - Hmg20b protein_coding retained_intron MGP_NODShiLtJ_T0026250.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90034856 90036172 - Hmg20b protein_coding processed_transcript MGP_NODShiLtJ_T0026251.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90034898 90036170 - Hmg20b protein_coding retained_intron MGP_NODShiLtJ_T0026252.1 MGP_NODShiLtJ_G0017414.1 mouse_genomes_project 10 90034908 90036297 - Hmg20b protein_coding processed_transcript MGP_NODShiLtJ_T0025675.1 MGP_NODShiLtJ_G0017253.1 mouse_genomes_project 10 85445060 85446508 - MGP_NODShiLtJ_P0025675 Gm10941 protein_coding protein_coding MGP_NODShiLtJ_T0027386.1 MGP_NODShiLtJ_G0017781.1 mouse_genomes_project 10 146106273 146107206 - MGP_NODShiLtJ_P0027386 Olfr796 protein_coding protein_coding MGP_NODShiLtJ_T0027387.1 MGP_NODShiLtJ_G0017781.1 mouse_genomes_project 10 146106273 146123924 - MGP_NODShiLtJ_P0027387 Olfr796 protein_coding protein_coding MGP_NODShiLtJ_T0025618.1 MGP_NODShiLtJ_G0017239.1 mouse_genomes_project 10 84359250 84365318 - MGP_NODShiLtJ_P0025618 Dip2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025619.1 MGP_NODShiLtJ_G0017239.1 mouse_genomes_project 10 84362545 84452908 - MGP_NODShiLtJ_P0025619 Dip2a protein_coding protein_coding MGP_NODShiLtJ_T0025620.1 MGP_NODShiLtJ_G0017239.1 mouse_genomes_project 10 84362843 84385621 - Dip2a protein_coding retained_intron MGP_NODShiLtJ_T0025621.1 MGP_NODShiLtJ_G0017239.1 mouse_genomes_project 10 84362860 84452908 - MGP_NODShiLtJ_P0025621 Dip2a protein_coding protein_coding MGP_NODShiLtJ_T0025622.1 MGP_NODShiLtJ_G0017239.1 mouse_genomes_project 10 84362860 84452877 - MGP_NODShiLtJ_P0025622 Dip2a protein_coding protein_coding MGP_NODShiLtJ_T0025623.1 MGP_NODShiLtJ_G0017239.1 mouse_genomes_project 10 84364481 84370381 - Dip2a protein_coding retained_intron MGP_NODShiLtJ_T0025624.1 MGP_NODShiLtJ_G0017239.1 mouse_genomes_project 10 84382370 84392223 - MGP_NODShiLtJ_P0025624 Dip2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025625.1 MGP_NODShiLtJ_G0017239.1 mouse_genomes_project 10 84395040 84452849 - Dip2a protein_coding retained_intron MGP_NODShiLtJ_T0025894.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88389764 88408850 - MGP_NODShiLtJ_P0025894 Plppr3 protein_coding protein_coding MGP_NODShiLtJ_T0025896.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88398267 88408646 - Plppr3 protein_coding retained_intron MGP_NODShiLtJ_T0025897.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88398267 88408850 - Plppr3 protein_coding retained_intron MGP_NODShiLtJ_T0025898.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88398267 88408914 - MGP_NODShiLtJ_P0025898 Plppr3 protein_coding protein_coding MGP_NODShiLtJ_T0025899.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88399898 88400768 - Plppr3 protein_coding retained_intron MGP_NODShiLtJ_T0025900.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88399918 88408504 - MGP_NODShiLtJ_P0025900 Plppr3 protein_coding protein_coding MGP_NODShiLtJ_T0025901.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88399924 88408688 - MGP_NODShiLtJ_P0025901 Plppr3 protein_coding protein_coding MGP_NODShiLtJ_T0025902.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88400340 88408669 - Plppr3 protein_coding processed_transcript MGP_NODShiLtJ_T0025903.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88400394 88408679 - MGP_NODShiLtJ_P0025903 Plppr3 protein_coding protein_coding MGP_NODShiLtJ_T0025904.1 MGP_NODShiLtJ_G0017325.1 mouse_genomes_project 10 88400945 88408650 - MGP_NODShiLtJ_P0025904 Plppr3 protein_coding protein_coding MGP_NODShiLtJ_T0098251.1 MGP_NODShiLtJ_G0036662.1 mouse_genomes_project 10 136021336 136022486 - Gm15961 sense_intronic sense_intronic MGP_NODShiLtJ_T0006048.1 MGP_NODShiLtJ_G0005058.1 mouse_genomes_project 10 85687116 85720310 + 2810425M01Rik lincRNA lincRNA MGP_NODShiLtJ_T0026462.1 MGP_NODShiLtJ_G0017467.1 mouse_genomes_project 10 95173459 95175476 + MGP_NODShiLtJ_P0026462 Ascl4 protein_coding protein_coding MGP_NODShiLtJ_T0026463.1 MGP_NODShiLtJ_G0017467.1 mouse_genomes_project 10 95174552 95194437 + MGP_NODShiLtJ_P0026463 Ascl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027266.1 MGP_NODShiLtJ_G0017719.1 mouse_genomes_project 10 144633794 144651807 + MGP_NODShiLtJ_P0027266 Pan2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027267.1 MGP_NODShiLtJ_G0017719.1 mouse_genomes_project 10 144633804 144651813 + MGP_NODShiLtJ_P0027267 Pan2 protein_coding protein_coding MGP_NODShiLtJ_T0027216.1 MGP_NODShiLtJ_G0017706.1 mouse_genomes_project 10 144306555 144321868 + MGP_NODShiLtJ_P0027216 Naca protein_coding protein_coding MGP_NODShiLtJ_T0027217.1 MGP_NODShiLtJ_G0017706.1 mouse_genomes_project 10 144306555 144321868 + MGP_NODShiLtJ_P0027217 Naca protein_coding protein_coding MGP_NODShiLtJ_T0027218.1 MGP_NODShiLtJ_G0017706.1 mouse_genomes_project 10 144306807 144321863 + MGP_NODShiLtJ_P0027218 Naca protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024244.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029536 4294243 + MGP_NODShiLtJ_P0024244 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024245.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029536 4354229 + MGP_NODShiLtJ_P0024245 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024246.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029623 4354574 + MGP_NODShiLtJ_P0024246 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024247.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029623 4131102 + MGP_NODShiLtJ_P0024247 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024248.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029623 4131102 + MGP_NODShiLtJ_P0024248 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024249.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029623 4108619 + MGP_NODShiLtJ_P0024249 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024250.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029623 4131857 + MGP_NODShiLtJ_P0024250 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024251.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029623 4131102 + MGP_NODShiLtJ_P0024251 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024252.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4029623 4131102 + MGP_NODShiLtJ_P0024252 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024253.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060622 4131592 + MGP_NODShiLtJ_P0024253 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024254.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060715 4354206 + MGP_NODShiLtJ_P0024254 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024255.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4122842 + MGP_NODShiLtJ_P0024255 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024256.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4354206 + MGP_NODShiLtJ_P0024256 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024257.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4122685 + MGP_NODShiLtJ_P0024257 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024258.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4110293 + MGP_NODShiLtJ_P0024258 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024259.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4294293 + MGP_NODShiLtJ_P0024259 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024260.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4122667 + MGP_NODShiLtJ_P0024260 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024261.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4119977 + MGP_NODShiLtJ_P0024261 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024262.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4294303 + MGP_NODShiLtJ_P0024262 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024263.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4114417 + MGP_NODShiLtJ_P0024263 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024264.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4354489 + MGP_NODShiLtJ_P0024264 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024265.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4121216 + MGP_NODShiLtJ_P0024265 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024266.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4354225 + MGP_NODShiLtJ_P0024266 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024267.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4354509 + MGP_NODShiLtJ_P0024267 Oprm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024268.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4355218 + MGP_NODShiLtJ_P0024268 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024269.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060830 4354228 + MGP_NODShiLtJ_P0024269 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024270.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060858 4114223 + MGP_NODShiLtJ_P0024270 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024271.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060858 4121251 + MGP_NODShiLtJ_P0024271 Oprm1 protein_coding protein_coding MGP_NODShiLtJ_T0024272.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4060996 4354509 + Oprm1 protein_coding processed_transcript MGP_NODShiLtJ_T0024273.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4061046 4108566 + Oprm1 protein_coding processed_transcript MGP_NODShiLtJ_T0024274.1 MGP_NODShiLtJ_G0016856.1 mouse_genomes_project 10 4061120 4131231 + Oprm1 protein_coding processed_transcript MGP_NODShiLtJ_T0026151.1 MGP_NODShiLtJ_G0017389.1 mouse_genomes_project 10 89549349 89565942 - MGP_NODShiLtJ_P0026151 Lmnb2 protein_coding protein_coding MGP_NODShiLtJ_T0026152.1 MGP_NODShiLtJ_G0017389.1 mouse_genomes_project 10 89550789 89554404 - MGP_NODShiLtJ_P0026152 Lmnb2 protein_coding protein_coding MGP_NODShiLtJ_T0026153.1 MGP_NODShiLtJ_G0017389.1 mouse_genomes_project 10 89557682 89565575 - Lmnb2 protein_coding processed_transcript MGP_NODShiLtJ_T0026862.1 MGP_NODShiLtJ_G0017585.1 mouse_genomes_project 10 125097333 125099693 + MGP_NODShiLtJ_P0026862 Phlda1 protein_coding protein_coding MGP_NODShiLtJ_T0026863.1 MGP_NODShiLtJ_G0017585.1 mouse_genomes_project 10 125098743 125099213 + Phlda1 protein_coding processed_transcript MGP_NODShiLtJ_T0003057.1 MGP_NODShiLtJ_G0002842.1 mouse_genomes_project 10 143899473 143906211 - Gm16230 antisense antisense MGP_NODShiLtJ_T0025843.1 MGP_NODShiLtJ_G0017311.1 mouse_genomes_project 10 88178472 88182435 + MGP_NODShiLtJ_P0025843 Madcam1 protein_coding protein_coding MGP_NODShiLtJ_T0026982.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134518412 135211983 + MGP_NODShiLtJ_P0026982 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026983.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134518700 135199229 + MGP_NODShiLtJ_P0026983 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026984.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134518706 135200994 + MGP_NODShiLtJ_P0026984 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026985.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134900119 135200993 + MGP_NODShiLtJ_P0026985 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026986.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134900128 135200149 + MGP_NODShiLtJ_P0026986 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026987.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134900235 135126035 + Grip1 protein_coding retained_intron MGP_NODShiLtJ_T0026988.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134900242 135199229 + MGP_NODShiLtJ_P0026988 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026989.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134900242 135199229 + MGP_NODShiLtJ_P0026989 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026990.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134900245 135199149 + MGP_NODShiLtJ_P0026990 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026991.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134900255 135211782 + MGP_NODShiLtJ_P0026991 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026992.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134934909 135200989 + Grip1 protein_coding retained_intron MGP_NODShiLtJ_T0026993.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 134996558 135199149 + Grip1 protein_coding processed_transcript MGP_NODShiLtJ_T0026994.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 135106981 135211984 + MGP_NODShiLtJ_P0026994 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026995.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 135107183 135200644 + MGP_NODShiLtJ_P0026995 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026996.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 135107331 135199425 + MGP_NODShiLtJ_P0026996 Grip1 protein_coding protein_coding MGP_NODShiLtJ_T0026997.1 MGP_NODShiLtJ_G0017632.1 mouse_genomes_project 10 135107367 135211983 + MGP_NODShiLtJ_P0026997 Grip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024417.1 MGP_NODShiLtJ_G0016889.1 mouse_genomes_project 10 11542951 11579756 - MGP_NODShiLtJ_P0024417 Pex3 protein_coding protein_coding MGP_NODShiLtJ_T0024418.1 MGP_NODShiLtJ_G0016889.1 mouse_genomes_project 10 11544055 11579512 - MGP_NODShiLtJ_P0024418 Pex3 protein_coding protein_coding MGP_NODShiLtJ_T0024419.1 MGP_NODShiLtJ_G0016889.1 mouse_genomes_project 10 11548894 11557324 - Pex3 protein_coding retained_intron MGP_NODShiLtJ_T0024420.1 MGP_NODShiLtJ_G0016889.1 mouse_genomes_project 10 11552628 11579478 - Pex3 protein_coding processed_transcript MGP_NODShiLtJ_T0024421.1 MGP_NODShiLtJ_G0016889.1 mouse_genomes_project 10 11557089 11579433 - Pex3 protein_coding processed_transcript MGP_NODShiLtJ_T0024422.1 MGP_NODShiLtJ_G0016890.1 mouse_genomes_project 10 11579507 11591150 + MGP_NODShiLtJ_P0024422 Adat2 protein_coding protein_coding MGP_NODShiLtJ_T0026154.1 MGP_NODShiLtJ_G0017390.1 mouse_genomes_project 10 89577528 89579642 + MGP_NODShiLtJ_P0026154 Gadd45b protein_coding protein_coding MGP_NODShiLtJ_T0025960.1 MGP_NODShiLtJ_G0017342.1 mouse_genomes_project 10 88606787 88653416 - MGP_NODShiLtJ_P0025960 Sbno2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025961.1 MGP_NODShiLtJ_G0017342.1 mouse_genomes_project 10 88607213 88653456 - MGP_NODShiLtJ_P0025961 Sbno2 protein_coding protein_coding MGP_NODShiLtJ_T0006021.1 MGP_NODShiLtJ_G0005035.1 mouse_genomes_project 10 21244272 21259248 - Platr6 lincRNA lincRNA MGP_NODShiLtJ_T0026412.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92598589 92650226 - MGP_NODShiLtJ_P0026412 Appl2 protein_coding protein_coding MGP_NODShiLtJ_T0026413.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92598953 92602435 - MGP_NODShiLtJ_P0026413 Appl2 protein_coding protein_coding MGP_NODShiLtJ_T0026414.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92599298 92610506 - MGP_NODShiLtJ_P0026414 Appl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026415.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92601208 92602689 - Appl2 protein_coding retained_intron MGP_NODShiLtJ_T0026416.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92602071 92613379 - Appl2 protein_coding retained_intron MGP_NODShiLtJ_T0026417.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92602175 92612766 - Appl2 protein_coding retained_intron MGP_NODShiLtJ_T0026418.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92606063 92650158 - Appl2 protein_coding retained_intron MGP_NODShiLtJ_T0026419.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92606183 92613226 - Appl2 protein_coding retained_intron MGP_NODShiLtJ_T0026420.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92610104 92612600 - Appl2 protein_coding retained_intron MGP_NODShiLtJ_T0026421.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92615756 92629798 - Appl2 protein_coding processed_transcript MGP_NODShiLtJ_T0026422.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92618914 92650153 - MGP_NODShiLtJ_P0026422 Appl2 protein_coding protein_coding MGP_NODShiLtJ_T0026423.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92622208 92650091 - MGP_NODShiLtJ_P0026423 Appl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026424.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92622322 92638939 - Appl2 protein_coding processed_transcript MGP_NODShiLtJ_T0026425.1 MGP_NODShiLtJ_G0017451.1 mouse_genomes_project 10 92626141 92650163 - MGP_NODShiLtJ_P0026425 Appl2 protein_coding protein_coding MGP_NODShiLtJ_T0006100.1 MGP_NODShiLtJ_G0005088.1 mouse_genomes_project 10 134476364 134490456 + 1700025F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0025361.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76411609 76519417 + MGP_NODShiLtJ_P0025361 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025362.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76478431 76561589 + MGP_NODShiLtJ_P0025362 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025364.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76488130 76563467 + MGP_NODShiLtJ_P0025364 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025365.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76488153 76545377 + Rhobtb1 protein_coding retained_intron MGP_NODShiLtJ_T0025366.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76488172 76561688 + MGP_NODShiLtJ_P0025366 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025367.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76488580 76538075 + MGP_NODShiLtJ_P0025367 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025368.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76488667 76519427 + MGP_NODShiLtJ_P0025368 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025369.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76488690 76563456 + MGP_NODShiLtJ_P0025369 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025370.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76490798 76561399 + MGP_NODShiLtJ_P0025370 Rhobtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025371.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76494862 76519432 + MGP_NODShiLtJ_P0025371 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025372.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76537504 76542029 + Rhobtb1 protein_coding processed_transcript MGP_NODShiLtJ_T0025373.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76551074 76561688 + MGP_NODShiLtJ_P0025373 Rhobtb1 protein_coding protein_coding MGP_NODShiLtJ_T0025374.1 MGP_NODShiLtJ_G0017191.1 mouse_genomes_project 10 76551187 76558572 + Rhobtb1 protein_coding processed_transcript MGP_NODShiLtJ_T0024284.1 MGP_NODShiLtJ_G0016858.1 mouse_genomes_project 10 4446100 4462491 - MGP_NODShiLtJ_P0024284 Cnksr3 protein_coding protein_coding MGP_NODShiLtJ_T0024285.1 MGP_NODShiLtJ_G0016858.1 mouse_genomes_project 10 4446100 4540540 - MGP_NODShiLtJ_P0024285 Cnksr3 protein_coding protein_coding MGP_NODShiLtJ_T0002993.1 MGP_NODShiLtJ_G0002794.1 mouse_genomes_project 10 69413982 69415847 - Gm16143 antisense antisense MGP_NODShiLtJ_T0025054.1 MGP_NODShiLtJ_G0017107.1 mouse_genomes_project 10 64343848 64393055 + MGP_NODShiLtJ_P0025054 Ranbp2 protein_coding protein_coding MGP_NODShiLtJ_T0027124.1 MGP_NODShiLtJ_G0017677.1 mouse_genomes_project 10 143471951 143477467 + MGP_NODShiLtJ_P0027124 Ddit3 protein_coding protein_coding MGP_NODShiLtJ_T0027125.1 MGP_NODShiLtJ_G0017677.1 mouse_genomes_project 10 143471970 143477244 + MGP_NODShiLtJ_P0027125 Ddit3 protein_coding protein_coding MGP_NODShiLtJ_T0027126.1 MGP_NODShiLtJ_G0017677.1 mouse_genomes_project 10 143471971 143475761 + Ddit3 protein_coding retained_intron MGP_NODShiLtJ_T0006052.1 MGP_NODShiLtJ_G0005060.1 mouse_genomes_project 10 89199956 89202852 + Gm26710 lincRNA lincRNA MGP_NODShiLtJ_T0098651.1 MGP_NODShiLtJ_G0037045.1 mouse_genomes_project 10 117376171 117376337 + Gm25587 snRNA snRNA MGP_NODShiLtJ_T0025018.1 MGP_NODShiLtJ_G0017100.1 mouse_genomes_project 10 63322340 63348090 - MGP_NODShiLtJ_P0025018 Serinc1 protein_coding protein_coding MGP_NODShiLtJ_T0025019.1 MGP_NODShiLtJ_G0017100.1 mouse_genomes_project 10 63338698 63347988 - MGP_NODShiLtJ_P0025019 Serinc1 protein_coding protein_coding MGP_NODShiLtJ_T0025020.1 MGP_NODShiLtJ_G0017100.1 mouse_genomes_project 10 63338847 63347970 - MGP_NODShiLtJ_P0025020 Serinc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025021.1 MGP_NODShiLtJ_G0017100.1 mouse_genomes_project 10 63340784 63348037 - Serinc1 protein_coding retained_intron MGP_NODShiLtJ_T0025022.1 MGP_NODShiLtJ_G0017100.1 mouse_genomes_project 10 63340790 63347969 - Serinc1 protein_coding retained_intron MGP_NODShiLtJ_T0024562.1 MGP_NODShiLtJ_G0016930.1 mouse_genomes_project 10 21569835 22045303 - protein_coding processed_transcript MGP_NODShiLtJ_T0024563.1 MGP_NODShiLtJ_G0016930.1 mouse_genomes_project 10 21649763 22045557 - protein_coding processed_transcript MGP_NODShiLtJ_T0024564.1 MGP_NODShiLtJ_G0016930.1 mouse_genomes_project 10 21649850 22046013 - MGP_NODShiLtJ_P0024564 protein_coding protein_coding MGP_NODShiLtJ_T0024568.1 MGP_NODShiLtJ_G0016930.1 mouse_genomes_project 10 22045181 22045415 - protein_coding transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0026435.1 MGP_NODShiLtJ_G0017457.1 mouse_genomes_project 10 93834688 94000748 + MGP_NODShiLtJ_P0026435 Rfx4 protein_coding protein_coding MGP_NODShiLtJ_T0026436.1 MGP_NODShiLtJ_G0017457.1 mouse_genomes_project 10 93841754 93902894 + Rfx4 protein_coding processed_transcript MGP_NODShiLtJ_T0026437.1 MGP_NODShiLtJ_G0017457.1 mouse_genomes_project 10 93841754 93902894 + Rfx4 protein_coding processed_transcript MGP_NODShiLtJ_T0026438.1 MGP_NODShiLtJ_G0017457.1 mouse_genomes_project 10 93927532 93965864 + Rfx4 protein_coding processed_transcript MGP_NODShiLtJ_T0026439.1 MGP_NODShiLtJ_G0017457.1 mouse_genomes_project 10 93927532 94000743 + MGP_NODShiLtJ_P0026439 Rfx4 protein_coding protein_coding MGP_NODShiLtJ_T0012302.1 MGP_NODShiLtJ_G0010410.1 mouse_genomes_project 10 81497798 81498347 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024991.1 MGP_NODShiLtJ_G0017087.1 mouse_genomes_project 10 57701075 58171660 + MGP_NODShiLtJ_P0024991 Slc35f1 protein_coding protein_coding MGP_NODShiLtJ_T0024868.1 MGP_NODShiLtJ_G0017046.1 mouse_genomes_project 10 44525549 44632174 - MGP_NODShiLtJ_P0024868 protein_coding protein_coding MGP_NODShiLtJ_T0024869.1 MGP_NODShiLtJ_G0017046.1 mouse_genomes_project 10 44525552 44590692 - protein_coding retained_intron MGP_NODShiLtJ_T0024870.1 MGP_NODShiLtJ_G0017046.1 mouse_genomes_project 10 44525559 44632120 - MGP_NODShiLtJ_P0024870 protein_coding protein_coding MGP_NODShiLtJ_T0024871.1 MGP_NODShiLtJ_G0017046.1 mouse_genomes_project 10 44526427 44590070 - protein_coding retained_intron MGP_NODShiLtJ_T0024872.1 MGP_NODShiLtJ_G0017046.1 mouse_genomes_project 10 44527183 44632180 - MGP_NODShiLtJ_P0024872 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024873.1 MGP_NODShiLtJ_G0017046.1 mouse_genomes_project 10 44600561 44607062 - MGP_NODShiLtJ_P0024873 protein_coding protein_coding MGP_NODShiLtJ_T0024874.1 MGP_NODShiLtJ_G0017046.1 mouse_genomes_project 10 44613619 44632118 - MGP_NODShiLtJ_P0024874 protein_coding protein_coding MGP_NODShiLtJ_T0024875.1 MGP_NODShiLtJ_G0017046.1 mouse_genomes_project 10 44614160 44632120 - MGP_NODShiLtJ_P0024875 protein_coding protein_coding MGP_NODShiLtJ_T0099841.1 MGP_NODShiLtJ_G0038235.1 mouse_genomes_project 10 23498192 23499936 - Snora33 snoRNA snoRNA MGP_NODShiLtJ_T0025515.1 MGP_NODShiLtJ_G0017208.1 mouse_genomes_project 10 82939492 82993307 + MGP_NODShiLtJ_P0025515 Gnaz protein_coding protein_coding MGP_NODShiLtJ_T0025516.1 MGP_NODShiLtJ_G0017208.1 mouse_genomes_project 10 82939524 82964639 + Gnaz protein_coding processed_transcript MGP_NODShiLtJ_T0025517.1 MGP_NODShiLtJ_G0017208.1 mouse_genomes_project 10 82963435 82993298 + MGP_NODShiLtJ_P0025517 Gnaz protein_coding protein_coding MGP_NODShiLtJ_T0099874.1 MGP_NODShiLtJ_G0038268.1 mouse_genomes_project 10 106059589 106059722 + Gm24433 snoRNA snoRNA MGP_NODShiLtJ_T0006034.1 MGP_NODShiLtJ_G0005048.1 mouse_genomes_project 10 67166870 67175352 - Gm20610 lincRNA lincRNA MGP_NODShiLtJ_T0026864.1 MGP_NODShiLtJ_G0017586.1 mouse_genomes_project 10 125632544 125649596 + MGP_NODShiLtJ_P0026864 Krr1 protein_coding protein_coding MGP_NODShiLtJ_T0026865.1 MGP_NODShiLtJ_G0017586.1 mouse_genomes_project 10 125632637 125636396 + Krr1 protein_coding retained_intron MGP_NODShiLtJ_T0026866.1 MGP_NODShiLtJ_G0017586.1 mouse_genomes_project 10 125632655 125648084 + Krr1 protein_coding retained_intron MGP_NODShiLtJ_T0026867.1 MGP_NODShiLtJ_G0017586.1 mouse_genomes_project 10 125632673 125645871 + MGP_NODShiLtJ_P0026867 Krr1 protein_coding protein_coding MGP_NODShiLtJ_T0017012.1 MGP_NODShiLtJ_G0015013.1 mouse_genomes_project 10 143469760 143470860 + Gm20492 processed_transcript processed_transcript MGP_NODShiLtJ_T0025108.1 MGP_NODShiLtJ_G0017125.1 mouse_genomes_project 10 66147645 66171258 + Spock2 protein_coding retained_intron MGP_NODShiLtJ_T0025109.1 MGP_NODShiLtJ_G0017125.1 mouse_genomes_project 10 66147645 66179371 + MGP_NODShiLtJ_P0025109 Spock2 protein_coding protein_coding MGP_NODShiLtJ_T0025110.1 MGP_NODShiLtJ_G0017125.1 mouse_genomes_project 10 66147894 66178081 + MGP_NODShiLtJ_P0025110 Spock2 protein_coding protein_coding MGP_NODShiLtJ_T0027352.1 MGP_NODShiLtJ_G0017755.1 mouse_genomes_project 10 145433044 145441520 + MGP_NODShiLtJ_P0027352 Olfr763 protein_coding protein_coding MGP_NODShiLtJ_T0003058.1 MGP_NODShiLtJ_G0002843.1 mouse_genomes_project 10 144755199 144758921 - Gm17201 antisense antisense MGP_NODShiLtJ_T0099862.1 MGP_NODShiLtJ_G0038256.1 mouse_genomes_project 10 69072229 69072294 - Snord98 snoRNA snoRNA MGP_NODShiLtJ_T0027060.1 MGP_NODShiLtJ_G0017653.1 mouse_genomes_project 10 138563920 138653498 - MGP_NODShiLtJ_P0027060 Usp15 protein_coding protein_coding MGP_NODShiLtJ_T0025943.1 MGP_NODShiLtJ_G0017339.1 mouse_genomes_project 10 88561852 88577285 + MGP_NODShiLtJ_P0025943 Hmha1 protein_coding protein_coding MGP_NODShiLtJ_T0025944.1 MGP_NODShiLtJ_G0017339.1 mouse_genomes_project 10 88561938 88577282 + Hmha1 protein_coding retained_intron MGP_NODShiLtJ_T0025945.1 MGP_NODShiLtJ_G0017339.1 mouse_genomes_project 10 88562115 88577282 + MGP_NODShiLtJ_P0025945 Hmha1 protein_coding protein_coding MGP_NODShiLtJ_T0025946.1 MGP_NODShiLtJ_G0017339.1 mouse_genomes_project 10 88565042 88577281 + MGP_NODShiLtJ_P0025946 Hmha1 protein_coding protein_coding MGP_NODShiLtJ_T0025947.1 MGP_NODShiLtJ_G0017339.1 mouse_genomes_project 10 88567132 88577275 + Hmha1 protein_coding retained_intron MGP_NODShiLtJ_T0027262.1 MGP_NODShiLtJ_G0017716.1 mouse_genomes_project 10 144596110 144598265 + MGP_NODShiLtJ_P0027262 Apof protein_coding protein_coding MGP_NODShiLtJ_T0025648.1 MGP_NODShiLtJ_G0017248.1 mouse_genomes_project 10 84847693 84866281 - MGP_NODShiLtJ_P0025648 Col6a1 protein_coding protein_coding MGP_NODShiLtJ_T0025649.1 MGP_NODShiLtJ_G0017248.1 mouse_genomes_project 10 84853917 84858138 - Col6a1 protein_coding retained_intron MGP_NODShiLtJ_T0097733.1 MGP_NODShiLtJ_G0036145.1 mouse_genomes_project 10 17132148 17132385 + pseudogene pseudogene MGP_NODShiLtJ_T0011157.1 MGP_NODShiLtJ_G0009290.1 mouse_genomes_project 10 25197397 25197650 - Gm26167 misc_RNA misc_RNA MGP_NODShiLtJ_T0025792.1 MGP_NODShiLtJ_G0017286.1 mouse_genomes_project 10 86808876 86814138 - MGP_NODShiLtJ_P0025792 Gm9978 protein_coding protein_coding MGP_NODShiLtJ_T0026830.1 MGP_NODShiLtJ_G0017574.1 mouse_genomes_project 10 120730358 120956340 - MGP_NODShiLtJ_P0026830 Otogl protein_coding protein_coding MGP_NODShiLtJ_T0026120.1 MGP_NODShiLtJ_G0017375.1 mouse_genomes_project 10 89320040 89338147 - MGP_NODShiLtJ_P0026120 Mob3a protein_coding protein_coding MGP_NODShiLtJ_T0025794.1 MGP_NODShiLtJ_G0017288.1 mouse_genomes_project 10 86919238 86926663 - MGP_NODShiLtJ_P0025794 Syde1 protein_coding protein_coding MGP_NODShiLtJ_T0027396.1 MGP_NODShiLtJ_G0017788.1 mouse_genomes_project 10 146336965 146339919 + MGP_NODShiLtJ_P0027396 Olfr808 protein_coding protein_coding MGP_NODShiLtJ_T0027397.1 MGP_NODShiLtJ_G0017788.1 mouse_genomes_project 10 146338980 146339919 + MGP_NODShiLtJ_P0027397 Olfr808 protein_coding protein_coding MGP_NODShiLtJ_T0000814.1 MGP_NODShiLtJ_G0000744.1 mouse_genomes_project 10 133858328 133861023 + TEC TEC MGP_NODShiLtJ_T0024692.1 MGP_NODShiLtJ_G0016984.1 mouse_genomes_project 10 31984144 31987056 + MGP_NODShiLtJ_P0024692 Gm5422 protein_coding protein_coding MGP_NODShiLtJ_T0025070.1 MGP_NODShiLtJ_G0017116.1 mouse_genomes_project 10 65367605 65386363 + MGP_NODShiLtJ_P0025070 Pla2g12b protein_coding protein_coding MGP_NODShiLtJ_T0025071.1 MGP_NODShiLtJ_G0017116.1 mouse_genomes_project 10 65374966 65386357 + MGP_NODShiLtJ_P0025071 Pla2g12b protein_coding protein_coding MGP_NODShiLtJ_T0025183.1 MGP_NODShiLtJ_G0017146.1 mouse_genomes_project 10 67902777 67911052 + MGP_NODShiLtJ_P0025183 Tysnd1 protein_coding protein_coding MGP_NODShiLtJ_T0006094.1 MGP_NODShiLtJ_G0005085.1 mouse_genomes_project 10 131410338 131416449 - 1700030O20Rik lincRNA lincRNA MGP_NODShiLtJ_T0012294.1 MGP_NODShiLtJ_G0010402.1 mouse_genomes_project 10 65690762 65691011 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099844.1 MGP_NODShiLtJ_G0038238.1 mouse_genomes_project 10 25178549 25178680 - Gm25016 snoRNA snoRNA MGP_NODShiLtJ_T0026342.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90351216 90360973 + MGP_NODShiLtJ_P0026342 protein_coding protein_coding MGP_NODShiLtJ_T0026343.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90351255 90352424 + MGP_NODShiLtJ_P0026343 protein_coding protein_coding MGP_NODShiLtJ_T0026344.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90351382 90352419 + MGP_NODShiLtJ_P0026344 protein_coding protein_coding MGP_NODShiLtJ_T0026345.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90356371 90365691 + MGP_NODShiLtJ_P0026345 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026346.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90356375 90372805 + protein_coding retained_intron MGP_NODShiLtJ_T0026347.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90356375 90359094 + MGP_NODShiLtJ_P0026347 protein_coding protein_coding MGP_NODShiLtJ_T0026348.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90356381 90358571 + protein_coding retained_intron MGP_NODShiLtJ_T0026349.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90356381 90362572 + MGP_NODShiLtJ_P0026349 protein_coding protein_coding MGP_NODShiLtJ_T0026350.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90356389 90362613 + MGP_NODShiLtJ_P0026350 protein_coding protein_coding MGP_NODShiLtJ_T0026351.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90363126 90372802 + MGP_NODShiLtJ_P0026351 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026352.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90363599 90365631 + MGP_NODShiLtJ_P0026352 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026353.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90363611 90368635 + protein_coding retained_intron MGP_NODShiLtJ_T0026354.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90366482 90372672 + MGP_NODShiLtJ_P0026354 protein_coding protein_coding MGP_NODShiLtJ_T0026355.1 MGP_NODShiLtJ_G0017431.1 mouse_genomes_project 10 90369299 90369829 + protein_coding retained_intron MGP_NODShiLtJ_T0000797.1 MGP_NODShiLtJ_G0000728.1 mouse_genomes_project 10 69464307 69464649 + TEC TEC MGP_NODShiLtJ_T0027417.1 MGP_NODShiLtJ_G0017805.1 mouse_genomes_project 10 146943881 146944918 - MGP_NODShiLtJ_P0027417 Olfr826 protein_coding protein_coding MGP_NODShiLtJ_T0006091.1 MGP_NODShiLtJ_G0005083.1 mouse_genomes_project 10 126557879 126653771 + lincRNA lincRNA MGP_NODShiLtJ_T0006092.1 MGP_NODShiLtJ_G0005083.1 mouse_genomes_project 10 126557917 126653774 + lincRNA lincRNA MGP_NODShiLtJ_T0024457.1 MGP_NODShiLtJ_G0016900.1 mouse_genomes_project 10 17132143 17146554 - MGP_NODShiLtJ_P0024457 Abracl protein_coding protein_coding MGP_NODShiLtJ_T0027331.1 MGP_NODShiLtJ_G0017745.1 mouse_genomes_project 10 145217004 145230376 + MGP_NODShiLtJ_P0027331 Dnajc14 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012270.1 MGP_NODShiLtJ_G0010378.1 mouse_genomes_project 10 19932502 19936444 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024219.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1632404 1947102 + Esr1 protein_coding processed_transcript MGP_NODShiLtJ_T0024220.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1632797 2069771 + MGP_NODShiLtJ_P0024220 Esr1 protein_coding protein_coding MGP_NODShiLtJ_T0024221.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1632804 1697996 + Esr1 protein_coding retained_intron MGP_NODShiLtJ_T0024222.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1632821 1909913 + Esr1 protein_coding retained_intron MGP_NODShiLtJ_T0024223.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1632829 2067918 + MGP_NODShiLtJ_P0024223 Esr1 protein_coding protein_coding MGP_NODShiLtJ_T0024224.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1737926 2065183 + MGP_NODShiLtJ_P0024224 Esr1 protein_coding protein_coding MGP_NODShiLtJ_T0024225.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1737926 2028165 + MGP_NODShiLtJ_P0024225 Esr1 protein_coding protein_coding MGP_NODShiLtJ_T0024226.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1740422 1829735 + Esr1 protein_coding processed_transcript MGP_NODShiLtJ_T0024227.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1972645 2061089 + Esr1 protein_coding processed_transcript MGP_NODShiLtJ_T0024228.1 MGP_NODShiLtJ_G0016848.1 mouse_genomes_project 10 1998862 2064815 + Esr1 protein_coding processed_transcript MGP_NODShiLtJ_T0027292.1 MGP_NODShiLtJ_G0017729.1 mouse_genomes_project 10 144864691 144870064 - MGP_NODShiLtJ_P0027292 Myl6b protein_coding protein_coding MGP_NODShiLtJ_T0025546.1 MGP_NODShiLtJ_G0017216.1 mouse_genomes_project 10 83577152 83588108 - MGP_NODShiLtJ_P0025546 Lrrc75b protein_coding protein_coding MGP_NODShiLtJ_T0024943.1 MGP_NODShiLtJ_G0017068.1 mouse_genomes_project 10 48271936 48309205 + MGP_NODShiLtJ_P0024943 Bves protein_coding protein_coding MGP_NODShiLtJ_T0024711.1 MGP_NODShiLtJ_G0016993.1 mouse_genomes_project 10 35232851 35243192 + MGP_NODShiLtJ_P0024711 Rsph4a protein_coding protein_coding MGP_NODShiLtJ_T0025074.1 MGP_NODShiLtJ_G0017118.1 mouse_genomes_project 10 65414358 65593505 - MGP_NODShiLtJ_P0025074 Mcu protein_coding protein_coding MGP_NODShiLtJ_T0025075.1 MGP_NODShiLtJ_G0017118.1 mouse_genomes_project 10 65415971 65425549 - MGP_NODShiLtJ_P0025075 Mcu protein_coding protein_coding MGP_NODShiLtJ_T0025076.1 MGP_NODShiLtJ_G0017118.1 mouse_genomes_project 10 65504735 65593488 - MGP_NODShiLtJ_P0025076 Mcu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025077.1 MGP_NODShiLtJ_G0017118.1 mouse_genomes_project 10 65577728 65593492 - Mcu protein_coding processed_transcript MGP_NODShiLtJ_T0025078.1 MGP_NODShiLtJ_G0017118.1 mouse_genomes_project 10 65578492 65593468 - Mcu protein_coding processed_transcript MGP_NODShiLtJ_T0026909.1 MGP_NODShiLtJ_G0017605.1 mouse_genomes_project 10 130726273 130728527 - MGP_NODShiLtJ_P0026909 4933416C03Rik protein_coding protein_coding MGP_NODShiLtJ_T0024843.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44113581 44127585 - Ccdc162 protein_coding processed_transcript MGP_NODShiLtJ_T0024844.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44113584 44189085 - MGP_NODShiLtJ_P0024844 Ccdc162 protein_coding protein_coding MGP_NODShiLtJ_T0024845.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44113584 44165789 - MGP_NODShiLtJ_P0024845 Ccdc162 protein_coding protein_coding MGP_NODShiLtJ_T0024846.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44114027 44301592 - MGP_NODShiLtJ_P0024846 Ccdc162 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024847.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44114150 44157585 - MGP_NODShiLtJ_P0024847 Ccdc162 protein_coding protein_coding MGP_NODShiLtJ_T0024848.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44123663 44135412 - Ccdc162 protein_coding retained_intron MGP_NODShiLtJ_T0024849.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44125343 44300945 - MGP_NODShiLtJ_P0024849 Ccdc162 protein_coding protein_coding MGP_NODShiLtJ_T0024850.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44125462 44128153 - Ccdc162 protein_coding retained_intron MGP_NODShiLtJ_T0024851.1 MGP_NODShiLtJ_G0017041.1 mouse_genomes_project 10 44158602 44166080 - Ccdc162 protein_coding processed_transcript MGP_NODShiLtJ_T0006056.1 MGP_NODShiLtJ_G0005064.1 mouse_genomes_project 10 93554833 93563976 + 4930463O16Rik lincRNA lincRNA MGP_NODShiLtJ_T0006057.1 MGP_NODShiLtJ_G0005064.1 mouse_genomes_project 10 93555274 93559267 + 4930463O16Rik lincRNA lincRNA MGP_NODShiLtJ_T0009496.1 MGP_NODShiLtJ_G0007629.1 mouse_genomes_project 10 67033568 67033659 + Mir6408 miRNA miRNA MGP_NODShiLtJ_T0025456.1 MGP_NODShiLtJ_G0017204.1 mouse_genomes_project 10 78825587 78863655 + MGP_NODShiLtJ_P0025456 Ipmk protein_coding protein_coding MGP_NODShiLtJ_T0025457.1 MGP_NODShiLtJ_G0017204.1 mouse_genomes_project 10 78825660 78859770 + MGP_NODShiLtJ_P0025457 Ipmk protein_coding protein_coding MGP_NODShiLtJ_T0025458.1 MGP_NODShiLtJ_G0017204.1 mouse_genomes_project 10 78825660 78860009 + MGP_NODShiLtJ_P0025458 Ipmk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025459.1 MGP_NODShiLtJ_G0017204.1 mouse_genomes_project 10 78825660 78855193 + MGP_NODShiLtJ_P0025459 Ipmk protein_coding protein_coding MGP_NODShiLtJ_T0025460.1 MGP_NODShiLtJ_G0017204.1 mouse_genomes_project 10 78825667 78841651 + Ipmk protein_coding retained_intron MGP_NODShiLtJ_T0025461.1 MGP_NODShiLtJ_G0017204.1 mouse_genomes_project 10 78859518 78911722 + MGP_NODShiLtJ_P0025461 Ipmk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025462.1 MGP_NODShiLtJ_G0017204.1 mouse_genomes_project 10 78887712 78911869 + Ipmk protein_coding processed_transcript MGP_NODShiLtJ_T0009489.1 MGP_NODShiLtJ_G0007622.1 mouse_genomes_project 10 47824348 47824459 - Gm24271 miRNA miRNA MGP_NODShiLtJ_T0025175.1 MGP_NODShiLtJ_G0017141.1 mouse_genomes_project 10 67658494 67660187 - MGP_NODShiLtJ_P0025175 D830039M14Rik protein_coding protein_coding MGP_NODShiLtJ_T0009538.1 MGP_NODShiLtJ_G0007671.1 mouse_genomes_project 10 122637464 122637547 - Gm44495 miRNA miRNA MGP_NODShiLtJ_T0025717.1 MGP_NODShiLtJ_G0017261.1 mouse_genomes_project 10 85912854 85913942 - MGP_NODShiLtJ_P0025717 protein_coding protein_coding MGP_NODShiLtJ_T0009548.1 MGP_NODShiLtJ_G0007681.1 mouse_genomes_project 10 143146745 143146829 + Mir26a-2 miRNA miRNA MGP_NODShiLtJ_T0026170.1 MGP_NODShiLtJ_G0017395.1 mouse_genomes_project 10 89722685 89735213 + MGP_NODShiLtJ_P0026170 Thop1 protein_coding protein_coding MGP_NODShiLtJ_T0026171.1 MGP_NODShiLtJ_G0017395.1 mouse_genomes_project 10 89722777 89727531 + Thop1 protein_coding retained_intron MGP_NODShiLtJ_T0026172.1 MGP_NODShiLtJ_G0017395.1 mouse_genomes_project 10 89722809 89731258 + Thop1 protein_coding processed_transcript MGP_NODShiLtJ_T0026173.1 MGP_NODShiLtJ_G0017395.1 mouse_genomes_project 10 89725932 89731409 + Thop1 protein_coding retained_intron MGP_NODShiLtJ_T0026174.1 MGP_NODShiLtJ_G0017395.1 mouse_genomes_project 10 89731521 89732733 + Thop1 protein_coding retained_intron MGP_NODShiLtJ_T0026750.1 MGP_NODShiLtJ_G0017543.1 mouse_genomes_project 10 108068944 108069259 - MGP_NODShiLtJ_P0026750 Gm10754 protein_coding protein_coding MGP_NODShiLtJ_T0025238.1 MGP_NODShiLtJ_G0017157.1 mouse_genomes_project 10 68705732 68726248 - MGP_NODShiLtJ_P0025238 Supv3l1 protein_coding protein_coding MGP_NODShiLtJ_T0025239.1 MGP_NODShiLtJ_G0017157.1 mouse_genomes_project 10 68705778 68726193 - MGP_NODShiLtJ_P0025239 Supv3l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025240.1 MGP_NODShiLtJ_G0017157.1 mouse_genomes_project 10 68705863 68707145 - Supv3l1 protein_coding retained_intron MGP_NODShiLtJ_T0025241.1 MGP_NODShiLtJ_G0017157.1 mouse_genomes_project 10 68705966 68707492 - Supv3l1 protein_coding retained_intron MGP_NODShiLtJ_T0025242.1 MGP_NODShiLtJ_G0017157.1 mouse_genomes_project 10 68708882 68709651 - Supv3l1 protein_coding processed_transcript MGP_NODShiLtJ_T0025357.1 MGP_NODShiLtJ_G0017188.1 mouse_genomes_project 10 75215313 75402753 - MGP_NODShiLtJ_P0025357 Arid5b protein_coding protein_coding MGP_NODShiLtJ_T0027293.1 MGP_NODShiLtJ_G0017730.1 mouse_genomes_project 10 144882434 144898004 - MGP_NODShiLtJ_P0027293 Esyt1 protein_coding protein_coding MGP_NODShiLtJ_T0025798.1 MGP_NODShiLtJ_G0017290.1 mouse_genomes_project 10 87064818 87071079 - MGP_NODShiLtJ_P0025798 Casp14 protein_coding protein_coding MGP_NODShiLtJ_T0012266.1 MGP_NODShiLtJ_G0010374.1 mouse_genomes_project 10 9225573 9226302 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002980.1 MGP_NODShiLtJ_G0002783.1 mouse_genomes_project 10 44128497 44131288 + Gm17196 antisense antisense MGP_NODShiLtJ_T0098657.1 MGP_NODShiLtJ_G0037051.1 mouse_genomes_project 10 138908457 138908641 + Gm22958 snRNA snRNA MGP_NODShiLtJ_T0024674.1 MGP_NODShiLtJ_G0016976.1 mouse_genomes_project 10 29785607 29822229 + MGP_NODShiLtJ_P0024674 Echdc1 protein_coding protein_coding MGP_NODShiLtJ_T0024675.1 MGP_NODShiLtJ_G0016976.1 mouse_genomes_project 10 29785722 29821013 + MGP_NODShiLtJ_P0024675 Echdc1 protein_coding protein_coding MGP_NODShiLtJ_T0024676.1 MGP_NODShiLtJ_G0016976.1 mouse_genomes_project 10 29785941 29823330 + MGP_NODShiLtJ_P0024676 Echdc1 protein_coding protein_coding MGP_NODShiLtJ_T0024677.1 MGP_NODShiLtJ_G0016976.1 mouse_genomes_project 10 29786104 29809589 + Echdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0026648.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102641284 102788521 - MGP_NODShiLtJ_P0026648 Cfap54 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026649.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102641292 102964031 - MGP_NODShiLtJ_P0026649 Cfap54 protein_coding protein_coding MGP_NODShiLtJ_T0026650.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102672725 102711783 - MGP_NODShiLtJ_P0026650 Cfap54 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026651.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102777877 102817601 - Cfap54 protein_coding processed_transcript MGP_NODShiLtJ_T0026652.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102789295 102964009 - MGP_NODShiLtJ_P0026652 Cfap54 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026653.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102789295 102925105 - MGP_NODShiLtJ_P0026653 Cfap54 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026654.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102793822 102817609 - MGP_NODShiLtJ_P0026654 Cfap54 protein_coding protein_coding MGP_NODShiLtJ_T0026655.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102853100 102920636 - MGP_NODShiLtJ_P0026655 Cfap54 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026656.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102906724 102910111 - Cfap54 protein_coding processed_transcript MGP_NODShiLtJ_T0026657.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102914005 102964031 - MGP_NODShiLtJ_P0026657 Cfap54 protein_coding protein_coding MGP_NODShiLtJ_T0026658.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102921231 102964009 - MGP_NODShiLtJ_P0026658 Cfap54 protein_coding protein_coding MGP_NODShiLtJ_T0026659.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102942736 102964031 - Cfap54 protein_coding retained_intron MGP_NODShiLtJ_T0026660.1 MGP_NODShiLtJ_G0017510.1 mouse_genomes_project 10 102949356 102952849 - Cfap54 protein_coding processed_transcript MGP_NODShiLtJ_T0025360.1 MGP_NODShiLtJ_G0017190.1 mouse_genomes_project 10 75899816 75965923 + MGP_NODShiLtJ_P0025360 Tmem26 protein_coding protein_coding MGP_NODShiLtJ_T0027416.1 MGP_NODShiLtJ_G0017804.1 mouse_genomes_project 10 146832219 146846675 - MGP_NODShiLtJ_P0027416 protein_coding protein_coding MGP_NODShiLtJ_T0024571.1 MGP_NODShiLtJ_G0016934.1 mouse_genomes_project 10 22355748 22388485 - MGP_NODShiLtJ_P0024571 Tbpl1 protein_coding protein_coding MGP_NODShiLtJ_T0024572.1 MGP_NODShiLtJ_G0016934.1 mouse_genomes_project 10 22357252 22388976 - MGP_NODShiLtJ_P0024572 Tbpl1 protein_coding protein_coding MGP_NODShiLtJ_T0024573.1 MGP_NODShiLtJ_G0016934.1 mouse_genomes_project 10 22357394 22358257 - Tbpl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024574.1 MGP_NODShiLtJ_G0016934.1 mouse_genomes_project 10 22363652 22388399 - Tbpl1 protein_coding retained_intron MGP_NODShiLtJ_T0024209.1 MGP_NODShiLtJ_G0016846.1 mouse_genomes_project 10 1416522 1438004 + MGP_NODShiLtJ_P0024209 Armt1 protein_coding protein_coding MGP_NODShiLtJ_T0024210.1 MGP_NODShiLtJ_G0016846.1 mouse_genomes_project 10 1416629 1423946 + MGP_NODShiLtJ_P0024210 Armt1 protein_coding protein_coding MGP_NODShiLtJ_T0024211.1 MGP_NODShiLtJ_G0016846.1 mouse_genomes_project 10 1416636 1432380 + Armt1 protein_coding processed_transcript MGP_NODShiLtJ_T0024212.1 MGP_NODShiLtJ_G0016846.1 mouse_genomes_project 10 1416644 1419112 + Armt1 protein_coding retained_intron MGP_NODShiLtJ_T0024213.1 MGP_NODShiLtJ_G0016846.1 mouse_genomes_project 10 1416649 1436814 + MGP_NODShiLtJ_P0024213 Armt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024214.1 MGP_NODShiLtJ_G0016846.1 mouse_genomes_project 10 1418518 1424501 + Armt1 protein_coding processed_transcript MGP_NODShiLtJ_T0101530.1 MGP_NODShiLtJ_G0039700.1 mouse_genomes_project 10 119124807 119125273 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098626.1 MGP_NODShiLtJ_G0037020.1 mouse_genomes_project 10 64238767 64238874 - Gm23058 snRNA snRNA MGP_NODShiLtJ_T0025138.1 MGP_NODShiLtJ_G0017130.1 mouse_genomes_project 10 66477620 66481439 + MGP_NODShiLtJ_P0025138 Gm17455 protein_coding protein_coding MGP_NODShiLtJ_T0026186.1 MGP_NODShiLtJ_G0017398.1 mouse_genomes_project 10 89798082 89807397 + MGP_NODShiLtJ_P0026186 Zbtb7a protein_coding protein_coding MGP_NODShiLtJ_T0026187.1 MGP_NODShiLtJ_G0017398.1 mouse_genomes_project 10 89799133 89815130 + MGP_NODShiLtJ_P0026187 Zbtb7a protein_coding protein_coding MGP_NODShiLtJ_T0026188.1 MGP_NODShiLtJ_G0017398.1 mouse_genomes_project 10 89799411 89811344 + MGP_NODShiLtJ_P0026188 Zbtb7a protein_coding protein_coding MGP_NODShiLtJ_T0026189.1 MGP_NODShiLtJ_G0017398.1 mouse_genomes_project 10 89799428 89807008 + MGP_NODShiLtJ_P0026189 Zbtb7a protein_coding protein_coding MGP_NODShiLtJ_T0026190.1 MGP_NODShiLtJ_G0017398.1 mouse_genomes_project 10 89799440 89815903 + MGP_NODShiLtJ_P0026190 Zbtb7a protein_coding protein_coding MGP_NODShiLtJ_T0026191.1 MGP_NODShiLtJ_G0017398.1 mouse_genomes_project 10 89800807 89811359 + MGP_NODShiLtJ_P0026191 Zbtb7a protein_coding protein_coding MGP_NODShiLtJ_T0009533.1 MGP_NODShiLtJ_G0007666.1 mouse_genomes_project 10 107768059 107768144 + Mir3966 miRNA miRNA MGP_NODShiLtJ_T0025739.1 MGP_NODShiLtJ_G0017274.1 mouse_genomes_project 10 86241268 86248173 + MGP_NODShiLtJ_P0025739 1810043G02Rik protein_coding protein_coding MGP_NODShiLtJ_T0025740.1 MGP_NODShiLtJ_G0017274.1 mouse_genomes_project 10 86241398 86247994 + 1810043G02Rik protein_coding retained_intron MGP_NODShiLtJ_T0025741.1 MGP_NODShiLtJ_G0017274.1 mouse_genomes_project 10 86241415 86248173 + 1810043G02Rik protein_coding retained_intron MGP_NODShiLtJ_T0025742.1 MGP_NODShiLtJ_G0017274.1 mouse_genomes_project 10 86241417 86249644 + MGP_NODShiLtJ_P0025742 1810043G02Rik protein_coding protein_coding MGP_NODShiLtJ_T0025743.1 MGP_NODShiLtJ_G0017274.1 mouse_genomes_project 10 86241425 86248175 + 1810043G02Rik protein_coding retained_intron MGP_NODShiLtJ_T0025744.1 MGP_NODShiLtJ_G0017274.1 mouse_genomes_project 10 86241437 86243267 + 1810043G02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0025745.1 MGP_NODShiLtJ_G0017274.1 mouse_genomes_project 10 86243237 86247218 + 1810043G02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0025746.1 MGP_NODShiLtJ_G0017274.1 mouse_genomes_project 10 86244506 86245639 + 1810043G02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0024672.1 MGP_NODShiLtJ_G0016974.1 mouse_genomes_project 10 29604701 29666977 + MGP_NODShiLtJ_P0024672 Soga3 protein_coding protein_coding MGP_NODShiLtJ_T0026821.1 MGP_NODShiLtJ_G0017569.1 mouse_genomes_project 10 119084971 119491178 + MGP_NODShiLtJ_P0026821 Ppfia2 protein_coding protein_coding MGP_NODShiLtJ_T0026822.1 MGP_NODShiLtJ_G0017569.1 mouse_genomes_project 10 119089261 119726915 + MGP_NODShiLtJ_P0026822 Ppfia2 protein_coding protein_coding MGP_NODShiLtJ_T0097741.1 MGP_NODShiLtJ_G0036153.1 mouse_genomes_project 10 86076087 86076753 - pseudogene pseudogene MGP_NODShiLtJ_T0016977.1 MGP_NODShiLtJ_G0015002.1 mouse_genomes_project 10 24392062 24392963 - Gm15270 processed_transcript processed_transcript MGP_NODShiLtJ_T0016978.1 MGP_NODShiLtJ_G0015002.1 mouse_genomes_project 10 24392068 24437975 - Gm15270 processed_transcript processed_transcript MGP_NODShiLtJ_T0016979.1 MGP_NODShiLtJ_G0015002.1 mouse_genomes_project 10 24422164 24435900 - Gm15270 processed_transcript processed_transcript MGP_NODShiLtJ_T0016980.1 MGP_NODShiLtJ_G0015002.1 mouse_genomes_project 10 24437405 24439268 - Gm15270 processed_transcript processed_transcript MGP_NODShiLtJ_T0099861.1 MGP_NODShiLtJ_G0038255.1 mouse_genomes_project 10 65803589 65803721 - Gm23803 snoRNA snoRNA MGP_NODShiLtJ_T0009540.1 MGP_NODShiLtJ_G0007673.1 mouse_genomes_project 10 135608793 135608913 - Mir763 miRNA miRNA MGP_NODShiLtJ_T0012268.1 MGP_NODShiLtJ_G0010376.1 mouse_genomes_project 10 16901292 16902232 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025302.1 MGP_NODShiLtJ_G0017173.1 mouse_genomes_project 10 69481081 69583391 - MGP_NODShiLtJ_P0025302 Mypn protein_coding protein_coding MGP_NODShiLtJ_T0024469.1 MGP_NODShiLtJ_G0016903.1 mouse_genomes_project 10 17350855 17367687 - MGP_NODShiLtJ_P0024469 Ccdc28a protein_coding protein_coding MGP_NODShiLtJ_T0024470.1 MGP_NODShiLtJ_G0016903.1 mouse_genomes_project 10 17350948 17353509 - Ccdc28a protein_coding retained_intron MGP_NODShiLtJ_T0024471.1 MGP_NODShiLtJ_G0016903.1 mouse_genomes_project 10 17351231 17356784 - MGP_NODShiLtJ_P0024471 Ccdc28a protein_coding protein_coding MGP_NODShiLtJ_T0024472.1 MGP_NODShiLtJ_G0016903.1 mouse_genomes_project 10 17351297 17374763 - MGP_NODShiLtJ_P0024472 Ccdc28a protein_coding protein_coding MGP_NODShiLtJ_T0024473.1 MGP_NODShiLtJ_G0016903.1 mouse_genomes_project 10 17353957 17374466 - MGP_NODShiLtJ_P0024473 Ccdc28a protein_coding protein_coding MGP_NODShiLtJ_T0025147.1 MGP_NODShiLtJ_G0017133.1 mouse_genomes_project 10 67216637 67221623 + MGP_NODShiLtJ_P0025147 Pcbd1 protein_coding protein_coding MGP_NODShiLtJ_T0024809.1 MGP_NODShiLtJ_G0017032.1 mouse_genomes_project 10 43386529 43443743 + MGP_NODShiLtJ_P0024809 Wasf1 protein_coding protein_coding MGP_NODShiLtJ_T0024810.1 MGP_NODShiLtJ_G0017032.1 mouse_genomes_project 10 43386881 43443744 + MGP_NODShiLtJ_P0024810 Wasf1 protein_coding protein_coding MGP_NODShiLtJ_T0026907.1 MGP_NODShiLtJ_G0017604.1 mouse_genomes_project 10 130626151 130901297 + MGP_NODShiLtJ_P0026907 Ptprr protein_coding protein_coding MGP_NODShiLtJ_T0026908.1 MGP_NODShiLtJ_G0017604.1 mouse_genomes_project 10 130626225 130729569 + Ptprr protein_coding processed_transcript MGP_NODShiLtJ_T0026910.1 MGP_NODShiLtJ_G0017604.1 mouse_genomes_project 10 130758647 130901302 + MGP_NODShiLtJ_P0026910 Ptprr protein_coding protein_coding MGP_NODShiLtJ_T0026911.1 MGP_NODShiLtJ_G0017604.1 mouse_genomes_project 10 130812135 130854910 + Ptprr protein_coding processed_transcript MGP_NODShiLtJ_T0025008.1 MGP_NODShiLtJ_G0017094.1 mouse_genomes_project 10 59033284 59225932 - MGP_NODShiLtJ_P0025008 Man1a protein_coding protein_coding MGP_NODShiLtJ_T0025009.1 MGP_NODShiLtJ_G0017094.1 mouse_genomes_project 10 59035511 59225845 - MGP_NODShiLtJ_P0025009 Man1a protein_coding protein_coding MGP_NODShiLtJ_T0025010.1 MGP_NODShiLtJ_G0017094.1 mouse_genomes_project 10 59117899 59225845 - Man1a protein_coding retained_intron MGP_NODShiLtJ_T0025011.1 MGP_NODShiLtJ_G0017094.1 mouse_genomes_project 10 59148787 59225872 - MGP_NODShiLtJ_P0025011 Man1a protein_coding protein_coding MGP_NODShiLtJ_T0025012.1 MGP_NODShiLtJ_G0017094.1 mouse_genomes_project 10 59156960 59225873 - Man1a protein_coding retained_intron MGP_NODShiLtJ_T0099852.1 MGP_NODShiLtJ_G0038246.1 mouse_genomes_project 10 42685152 42685366 + Rnu3a snoRNA snoRNA MGP_NODShiLtJ_T0024594.1 MGP_NODShiLtJ_G0016947.1 mouse_genomes_project 10 23729810 23743726 + MGP_NODShiLtJ_P0024594 protein_coding protein_coding MGP_NODShiLtJ_T0009539.1 MGP_NODShiLtJ_G0007672.1 mouse_genomes_project 10 131188142 131188237 - Gm25190 miRNA miRNA MGP_NODShiLtJ_T0012283.1 MGP_NODShiLtJ_G0010391.1 mouse_genomes_project 10 45085424 45085601 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006028.1 MGP_NODShiLtJ_G0005042.1 mouse_genomes_project 10 44194114 44196945 - Gm29095 lincRNA lincRNA MGP_NODShiLtJ_T0006080.1 MGP_NODShiLtJ_G0005074.1 mouse_genomes_project 10 103837280 103841983 + 4930471D02Rik lincRNA lincRNA MGP_NODShiLtJ_T0003017.1 MGP_NODShiLtJ_G0002813.1 mouse_genomes_project 10 90100035 90102040 + Gm16104 antisense antisense MGP_NODShiLtJ_T0024275.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4175769 4294250 - MGP_NODShiLtJ_P0024275 Ipcef1 protein_coding protein_coding MGP_NODShiLtJ_T0024276.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4175805 4317300 - MGP_NODShiLtJ_P0024276 Ipcef1 protein_coding protein_coding MGP_NODShiLtJ_T0024277.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4214867 4372639 - MGP_NODShiLtJ_P0024277 Ipcef1 protein_coding protein_coding MGP_NODShiLtJ_T0024278.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4214867 4338701 - MGP_NODShiLtJ_P0024278 Ipcef1 protein_coding protein_coding MGP_NODShiLtJ_T0024279.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4220896 4294856 - Ipcef1 protein_coding processed_transcript MGP_NODShiLtJ_T0024280.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4220896 4295007 - Ipcef1 protein_coding processed_transcript MGP_NODShiLtJ_T0024281.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4223160 4338683 - MGP_NODShiLtJ_P0024281 Ipcef1 protein_coding protein_coding MGP_NODShiLtJ_T0024282.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4223240 4295076 - Ipcef1 protein_coding processed_transcript MGP_NODShiLtJ_T0024283.1 MGP_NODShiLtJ_G0016857.1 mouse_genomes_project 10 4271482 4314381 - MGP_NODShiLtJ_P0024283 Ipcef1 protein_coding protein_coding MGP_NODShiLtJ_T0025799.1 MGP_NODShiLtJ_G0017291.1 mouse_genomes_project 10 87106988 87113124 - MGP_NODShiLtJ_P0025799 Ccdc105 protein_coding protein_coding MGP_NODShiLtJ_T0026043.1 MGP_NODShiLtJ_G0017356.1 mouse_genomes_project 10 88892733 88895017 - MGP_NODShiLtJ_P0026043 2310011J03Rik protein_coding protein_coding MGP_NODShiLtJ_T0098632.1 MGP_NODShiLtJ_G0037026.1 mouse_genomes_project 10 88220548 88220655 - Gm25794 snRNA snRNA MGP_NODShiLtJ_T0025880.1 MGP_NODShiLtJ_G0017323.1 mouse_genomes_project 10 88347540 88356961 + MGP_NODShiLtJ_P0025880 Misp protein_coding protein_coding MGP_NODShiLtJ_T0025881.1 MGP_NODShiLtJ_G0017323.1 mouse_genomes_project 10 88349146 88356961 + MGP_NODShiLtJ_P0025881 Misp protein_coding protein_coding MGP_NODShiLtJ_T0012304.1 MGP_NODShiLtJ_G0010412.1 mouse_genomes_project 10 83650200 83650370 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098145.1 MGP_NODShiLtJ_G0036557.1 mouse_genomes_project 10 2100678 2100960 - Gm25694 ribozyme ribozyme MGP_NODShiLtJ_T0027383.1 MGP_NODShiLtJ_G0017779.1 mouse_genomes_project 10 146030112 146031048 + MGP_NODShiLtJ_P0027383 Olfr792 protein_coding protein_coding MGP_NODShiLtJ_T0099847.1 MGP_NODShiLtJ_G0038241.1 mouse_genomes_project 10 36627213 36627347 + Gm26341 snoRNA snoRNA MGP_NODShiLtJ_T0026093.1 MGP_NODShiLtJ_G0017367.1 mouse_genomes_project 10 89160948 89182749 - MGP_NODShiLtJ_P0026093 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026094.1 MGP_NODShiLtJ_G0017367.1 mouse_genomes_project 10 89160954 89165875 - protein_coding retained_intron MGP_NODShiLtJ_T0026095.1 MGP_NODShiLtJ_G0017367.1 mouse_genomes_project 10 89162305 89166841 - protein_coding retained_intron MGP_NODShiLtJ_T0026096.1 MGP_NODShiLtJ_G0017367.1 mouse_genomes_project 10 89162305 89166509 - protein_coding retained_intron MGP_NODShiLtJ_T0026097.1 MGP_NODShiLtJ_G0017367.1 mouse_genomes_project 10 89162648 89164346 - MGP_NODShiLtJ_P0026097 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026098.1 MGP_NODShiLtJ_G0017367.1 mouse_genomes_project 10 89166035 89169501 - MGP_NODShiLtJ_P0026098 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026099.1 MGP_NODShiLtJ_G0017367.1 mouse_genomes_project 10 89167365 89169499 - protein_coding processed_transcript MGP_NODShiLtJ_T0009529.1 MGP_NODShiLtJ_G0007662.1 mouse_genomes_project 10 103917655 103917751 - Mir331 miRNA miRNA MGP_NODShiLtJ_T0025992.1 MGP_NODShiLtJ_G0017346.1 mouse_genomes_project 10 88706036 88715966 + MGP_NODShiLtJ_P0025992 Midn protein_coding protein_coding MGP_NODShiLtJ_T0025993.1 MGP_NODShiLtJ_G0017346.1 mouse_genomes_project 10 88706036 88715967 + MGP_NODShiLtJ_P0025993 Midn protein_coding protein_coding MGP_NODShiLtJ_T0025994.1 MGP_NODShiLtJ_G0017346.1 mouse_genomes_project 10 88706880 88708047 + MGP_NODShiLtJ_P0025994 Midn protein_coding protein_coding MGP_NODShiLtJ_T0025995.1 MGP_NODShiLtJ_G0017346.1 mouse_genomes_project 10 88707654 88711280 + Midn protein_coding processed_transcript MGP_NODShiLtJ_T0025996.1 MGP_NODShiLtJ_G0017346.1 mouse_genomes_project 10 88708218 88711461 + MGP_NODShiLtJ_P0025996 Midn protein_coding protein_coding MGP_NODShiLtJ_T0025997.1 MGP_NODShiLtJ_G0017346.1 mouse_genomes_project 10 88708915 88712065 + MGP_NODShiLtJ_P0025997 Midn protein_coding protein_coding MGP_NODShiLtJ_T0025998.1 MGP_NODShiLtJ_G0017346.1 mouse_genomes_project 10 88708999 88711289 + MGP_NODShiLtJ_P0025998 Midn protein_coding protein_coding MGP_NODShiLtJ_T0024787.1 MGP_NODShiLtJ_G0017021.1 mouse_genomes_project 10 42344271 42375823 - MGP_NODShiLtJ_P0024787 Mfsd4b5 protein_coding protein_coding MGP_NODShiLtJ_T0024788.1 MGP_NODShiLtJ_G0017021.1 mouse_genomes_project 10 42356496 42375826 - MGP_NODShiLtJ_P0024788 Mfsd4b5 protein_coding protein_coding MGP_NODShiLtJ_T0024789.1 MGP_NODShiLtJ_G0017021.1 mouse_genomes_project 10 42358486 42375819 - MGP_NODShiLtJ_P0024789 Mfsd4b5 protein_coding protein_coding MGP_NODShiLtJ_T0024790.1 MGP_NODShiLtJ_G0017021.1 mouse_genomes_project 10 42362007 42375820 - MGP_NODShiLtJ_P0024790 Mfsd4b5 protein_coding protein_coding MGP_NODShiLtJ_T0024791.1 MGP_NODShiLtJ_G0017021.1 mouse_genomes_project 10 42362982 42363636 - MGP_NODShiLtJ_P0024791 Mfsd4b5 protein_coding protein_coding MGP_NODShiLtJ_T0024493.1 MGP_NODShiLtJ_G0016911.1 mouse_genomes_project 10 18799885 18818166 + MGP_NODShiLtJ_P0024493 Ifngr1 protein_coding protein_coding MGP_NODShiLtJ_T0024494.1 MGP_NODShiLtJ_G0016911.1 mouse_genomes_project 10 18799894 18805788 + Ifngr1 protein_coding retained_intron MGP_NODShiLtJ_T0024495.1 MGP_NODShiLtJ_G0016911.1 mouse_genomes_project 10 18799967 18811691 + MGP_NODShiLtJ_P0024495 Ifngr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024496.1 MGP_NODShiLtJ_G0016911.1 mouse_genomes_project 10 18799989 18809340 + MGP_NODShiLtJ_P0024496 Ifngr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024497.1 MGP_NODShiLtJ_G0016911.1 mouse_genomes_project 10 18799998 18811711 + MGP_NODShiLtJ_P0024497 Ifngr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024498.1 MGP_NODShiLtJ_G0016911.1 mouse_genomes_project 10 18813855 18817193 + Ifngr1 protein_coding retained_intron MGP_NODShiLtJ_T0027265.1 MGP_NODShiLtJ_G0017718.1 mouse_genomes_project 10 144626534 144628479 - MGP_NODShiLtJ_P0027265 Il23a protein_coding protein_coding MGP_NODShiLtJ_T0025191.1 MGP_NODShiLtJ_G0017148.1 mouse_genomes_project 10 67953271 67999560 - MGP_NODShiLtJ_P0025191 H2afy2 protein_coding protein_coding MGP_NODShiLtJ_T0024998.1 MGP_NODShiLtJ_G0017092.1 mouse_genomes_project 10 58707054 58719307 + MGP_NODShiLtJ_P0024998 Asf1a protein_coding protein_coding MGP_NODShiLtJ_T0000795.1 MGP_NODShiLtJ_G0000726.1 mouse_genomes_project 10 39110847 39111194 + TEC TEC MGP_NODShiLtJ_T0025567.1 MGP_NODShiLtJ_G0017218.1 mouse_genomes_project 10 83618082 83646973 + MGP_NODShiLtJ_P0025567 Ggt5 protein_coding protein_coding MGP_NODShiLtJ_T0025568.1 MGP_NODShiLtJ_G0017218.1 mouse_genomes_project 10 83618123 83634106 + MGP_NODShiLtJ_P0025568 Ggt5 protein_coding protein_coding MGP_NODShiLtJ_T0025569.1 MGP_NODShiLtJ_G0017218.1 mouse_genomes_project 10 83618534 83634108 + MGP_NODShiLtJ_P0025569 Ggt5 protein_coding protein_coding MGP_NODShiLtJ_T0025570.1 MGP_NODShiLtJ_G0017218.1 mouse_genomes_project 10 83632785 83639693 + Ggt5 protein_coding processed_transcript MGP_NODShiLtJ_T0099885.1 MGP_NODShiLtJ_G0038279.1 mouse_genomes_project 10 130972216 130972353 + Gm26495 snoRNA snoRNA MGP_NODShiLtJ_T0024449.1 MGP_NODShiLtJ_G0016896.1 mouse_genomes_project 10 12884619 12887211 - MGP_NODShiLtJ_P0024449 Gje1 protein_coding protein_coding MGP_NODShiLtJ_T0026148.1 MGP_NODShiLtJ_G0017386.1 mouse_genomes_project 10 89502257 89515669 + MGP_NODShiLtJ_P0026148 Sppl2b protein_coding protein_coding MGP_NODShiLtJ_T0024895.1 MGP_NODShiLtJ_G0017052.1 mouse_genomes_project 10 45459806 45535146 + MGP_NODShiLtJ_P0024895 Sec63 protein_coding protein_coding MGP_NODShiLtJ_T0024896.1 MGP_NODShiLtJ_G0017052.1 mouse_genomes_project 10 45459925 45532259 + Sec63 protein_coding retained_intron MGP_NODShiLtJ_T0024897.1 MGP_NODShiLtJ_G0017052.1 mouse_genomes_project 10 45460116 45513812 + Sec63 protein_coding retained_intron MGP_NODShiLtJ_T0024898.1 MGP_NODShiLtJ_G0017052.1 mouse_genomes_project 10 45518997 45531147 + Sec63 protein_coding processed_transcript MGP_NODShiLtJ_T0024899.1 MGP_NODShiLtJ_G0017052.1 mouse_genomes_project 10 45518997 45531150 + Sec63 protein_coding processed_transcript MGP_NODShiLtJ_T0012303.1 MGP_NODShiLtJ_G0010411.1 mouse_genomes_project 10 82812974 82813406 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024741.1 MGP_NODShiLtJ_G0017009.1 mouse_genomes_project 10 39114478 39122466 - MGP_NODShiLtJ_P0024741 Marcks protein_coding protein_coding MGP_NODShiLtJ_T0026846.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124319191 124321856 + E2f7 protein_coding processed_transcript MGP_NODShiLtJ_T0026847.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124319217 124330259 + MGP_NODShiLtJ_P0026847 E2f7 protein_coding protein_coding MGP_NODShiLtJ_T0026848.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124319220 124341761 + E2f7 protein_coding retained_intron MGP_NODShiLtJ_T0026849.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124319220 124364494 + MGP_NODShiLtJ_P0026849 E2f7 protein_coding protein_coding MGP_NODShiLtJ_T0026850.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124319265 124362620 + MGP_NODShiLtJ_P0026850 E2f7 protein_coding protein_coding MGP_NODShiLtJ_T0026851.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124319324 124328199 + MGP_NODShiLtJ_P0026851 E2f7 protein_coding protein_coding MGP_NODShiLtJ_T0026852.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124327883 124329869 + E2f7 protein_coding processed_transcript MGP_NODShiLtJ_T0026853.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124327953 124348274 + MGP_NODShiLtJ_P0026853 E2f7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026854.1 MGP_NODShiLtJ_G0017579.1 mouse_genomes_project 10 124337477 124339376 + E2f7 protein_coding retained_intron MGP_NODShiLtJ_T0027270.1 MGP_NODShiLtJ_G0017722.1 mouse_genomes_project 10 144707518 144717757 - MGP_NODShiLtJ_P0027270 Coq10a protein_coding protein_coding MGP_NODShiLtJ_T0098614.1 MGP_NODShiLtJ_G0037008.1 mouse_genomes_project 10 43945311 43945418 + Gm25626 snRNA snRNA MGP_NODShiLtJ_T0024719.1 MGP_NODShiLtJ_G0016999.1 mouse_genomes_project 10 35454354 35459522 - MGP_NODShiLtJ_P0024719 Fam26e protein_coding protein_coding MGP_NODShiLtJ_T0024601.1 MGP_NODShiLtJ_G0016954.1 mouse_genomes_project 10 23934986 23980445 + MGP_NODShiLtJ_P0024601 Stx7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026766.1 MGP_NODShiLtJ_G0017553.1 mouse_genomes_project 10 110756938 110847279 + MGP_NODShiLtJ_P0026766 Kitl protein_coding protein_coding MGP_NODShiLtJ_T0026767.1 MGP_NODShiLtJ_G0017553.1 mouse_genomes_project 10 110757134 110822071 + MGP_NODShiLtJ_P0026767 Kitl protein_coding protein_coding MGP_NODShiLtJ_T0026768.1 MGP_NODShiLtJ_G0017553.1 mouse_genomes_project 10 110757224 110842129 + MGP_NODShiLtJ_P0026768 Kitl protein_coding protein_coding MGP_NODShiLtJ_T0098618.1 MGP_NODShiLtJ_G0037012.1 mouse_genomes_project 10 49448481 49448588 + Gm25740 snRNA snRNA MGP_NODShiLtJ_T0009544.1 MGP_NODShiLtJ_G0007677.1 mouse_genomes_project 10 138422592 138422677 - Mirlet7i miRNA miRNA MGP_NODShiLtJ_T0027379.1 MGP_NODShiLtJ_G0017775.1 mouse_genomes_project 10 145965646 145966585 + MGP_NODShiLtJ_P0027379 Olfr789 protein_coding protein_coding MGP_NODShiLtJ_T0026131.1 MGP_NODShiLtJ_G0017380.1 mouse_genomes_project 10 89441098 89447825 + MGP_NODShiLtJ_P0026131 Sf3a2 protein_coding protein_coding MGP_NODShiLtJ_T0026132.1 MGP_NODShiLtJ_G0017380.1 mouse_genomes_project 10 89441632 89446908 + MGP_NODShiLtJ_P0026132 Sf3a2 protein_coding protein_coding MGP_NODShiLtJ_T0026133.1 MGP_NODShiLtJ_G0017380.1 mouse_genomes_project 10 89441869 89445302 + MGP_NODShiLtJ_P0026133 Sf3a2 protein_coding protein_coding MGP_NODShiLtJ_T0026134.1 MGP_NODShiLtJ_G0017380.1 mouse_genomes_project 10 89445400 89446918 + Sf3a2 protein_coding retained_intron MGP_NODShiLtJ_T0025531.1 MGP_NODShiLtJ_G0017212.1 mouse_genomes_project 10 83306748 83328959 + MGP_NODShiLtJ_P0025531 Adora2a protein_coding protein_coding MGP_NODShiLtJ_T0027164.1 MGP_NODShiLtJ_G0017687.1 mouse_genomes_project 10 143750634 143759743 - MGP_NODShiLtJ_P0027164 Nxph4 protein_coding protein_coding MGP_NODShiLtJ_T0026763.1 MGP_NODShiLtJ_G0017550.1 mouse_genomes_project 10 109943642 109947900 + MGP_NODShiLtJ_P0026763 Dusp6 protein_coding protein_coding MGP_NODShiLtJ_T0027354.1 MGP_NODShiLtJ_G0017757.1 mouse_genomes_project 10 145472421 145473428 - MGP_NODShiLtJ_P0027354 protein_coding protein_coding MGP_NODShiLtJ_T0006030.1 MGP_NODShiLtJ_G0005044.1 mouse_genomes_project 10 59226057 59232645 + Gm16998 lincRNA lincRNA MGP_NODShiLtJ_T0009541.1 MGP_NODShiLtJ_G0007674.1 mouse_genomes_project 10 136939569 136939645 - Gm24330 miRNA miRNA MGP_NODShiLtJ_T0025713.1 MGP_NODShiLtJ_G0017260.1 mouse_genomes_project 10 85834474 85859317 + MGP_NODShiLtJ_P0025713 Ube2g2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025714.1 MGP_NODShiLtJ_G0017260.1 mouse_genomes_project 10 85834525 85860756 + MGP_NODShiLtJ_P0025714 Ube2g2 protein_coding protein_coding MGP_NODShiLtJ_T0025715.1 MGP_NODShiLtJ_G0017260.1 mouse_genomes_project 10 85834529 85856258 + MGP_NODShiLtJ_P0025715 Ube2g2 protein_coding protein_coding MGP_NODShiLtJ_T0025716.1 MGP_NODShiLtJ_G0017260.1 mouse_genomes_project 10 85855943 85859266 + Ube2g2 protein_coding retained_intron MGP_NODShiLtJ_T0026717.1 MGP_NODShiLtJ_G0017527.1 mouse_genomes_project 10 104289201 104415705 + Tmcc3 protein_coding retained_intron MGP_NODShiLtJ_T0026718.1 MGP_NODShiLtJ_G0017527.1 mouse_genomes_project 10 104289269 104569543 + MGP_NODShiLtJ_P0026718 Tmcc3 protein_coding protein_coding MGP_NODShiLtJ_T0026719.1 MGP_NODShiLtJ_G0017527.1 mouse_genomes_project 10 104289382 104356073 + Tmcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0026720.1 MGP_NODShiLtJ_G0017527.1 mouse_genomes_project 10 104505016 104577777 + MGP_NODShiLtJ_P0026720 Tmcc3 protein_coding protein_coding MGP_NODShiLtJ_T0026721.1 MGP_NODShiLtJ_G0017527.1 mouse_genomes_project 10 104536209 104569669 + MGP_NODShiLtJ_P0026721 Tmcc3 protein_coding protein_coding MGP_NODShiLtJ_T0026722.1 MGP_NODShiLtJ_G0017527.1 mouse_genomes_project 10 104541630 104569414 + MGP_NODShiLtJ_P0026722 Tmcc3 protein_coding protein_coding MGP_NODShiLtJ_T0006093.1 MGP_NODShiLtJ_G0005084.1 mouse_genomes_project 10 131344037 131349133 + Gm26579 lincRNA lincRNA MGP_NODShiLtJ_T0101526.1 MGP_NODShiLtJ_G0039696.1 mouse_genomes_project 10 86063908 86064389 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0027391.1 MGP_NODShiLtJ_G0017785.1 mouse_genomes_project 10 146197116 146197982 - MGP_NODShiLtJ_P0027391 protein_coding protein_coding MGP_NODShiLtJ_T0027392.1 MGP_NODShiLtJ_G0017785.1 mouse_genomes_project 10 146197116 146198232 - MGP_NODShiLtJ_P0027392 protein_coding protein_coding MGP_NODShiLtJ_T0027393.1 MGP_NODShiLtJ_G0017785.1 mouse_genomes_project 10 146197840 146280443 - MGP_NODShiLtJ_P0027393 protein_coding protein_coding MGP_NODShiLtJ_T0025106.1 MGP_NODShiLtJ_G0017124.1 mouse_genomes_project 10 66035104 66139763 + MGP_NODShiLtJ_P0025106 Ascc1 protein_coding protein_coding MGP_NODShiLtJ_T0025107.1 MGP_NODShiLtJ_G0017124.1 mouse_genomes_project 10 66035626 66139763 + MGP_NODShiLtJ_P0025107 Ascc1 protein_coding protein_coding MGP_NODShiLtJ_T0024876.1 MGP_NODShiLtJ_G0017047.1 mouse_genomes_project 10 44807352 44908322 - MGP_NODShiLtJ_P0024876 Foxo3 protein_coding protein_coding MGP_NODShiLtJ_T0024877.1 MGP_NODShiLtJ_G0017047.1 mouse_genomes_project 10 44811297 44908312 - MGP_NODShiLtJ_P0024877 Foxo3 protein_coding protein_coding MGP_NODShiLtJ_T0024878.1 MGP_NODShiLtJ_G0017047.1 mouse_genomes_project 10 44821779 44908266 - MGP_NODShiLtJ_P0024878 Foxo3 protein_coding protein_coding MGP_NODShiLtJ_T0024879.1 MGP_NODShiLtJ_G0017047.1 mouse_genomes_project 10 44823069 44888765 - MGP_NODShiLtJ_P0024879 Foxo3 protein_coding protein_coding MGP_NODShiLtJ_T0024880.1 MGP_NODShiLtJ_G0017047.1 mouse_genomes_project 10 44877820 44908325 - MGP_NODShiLtJ_P0024880 Foxo3 protein_coding protein_coding MGP_NODShiLtJ_T0027362.1 MGP_NODShiLtJ_G0017762.1 mouse_genomes_project 10 145627675 145628611 - MGP_NODShiLtJ_P0027362 Olfr773 protein_coding protein_coding MGP_NODShiLtJ_T0009554.1 MGP_NODShiLtJ_G0007687.1 mouse_genomes_project 10 144766115 144766191 + Gm25361 miRNA miRNA MGP_NODShiLtJ_T0024593.1 MGP_NODShiLtJ_G0016946.1 mouse_genomes_project 10 23714052 23715090 - MGP_NODShiLtJ_P0024593 Taar6 protein_coding protein_coding MGP_NODShiLtJ_T0002970.1 MGP_NODShiLtJ_G0002777.1 mouse_genomes_project 10 25473737 25608480 + Gm29571 antisense antisense MGP_NODShiLtJ_T0012311.1 MGP_NODShiLtJ_G0010419.1 mouse_genomes_project 10 90210959 90211253 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027308.1 MGP_NODShiLtJ_G0017734.1 mouse_genomes_project 10 144946179 144970863 - MGP_NODShiLtJ_P0027308 Erbb3 protein_coding protein_coding MGP_NODShiLtJ_T0025455.1 MGP_NODShiLtJ_G0017203.1 mouse_genomes_project 10 78808038 78822996 - MGP_NODShiLtJ_P0025455 Cisd1 protein_coding protein_coding MGP_NODShiLtJ_T0011159.1 MGP_NODShiLtJ_G0009292.1 mouse_genomes_project 10 44945721 44945966 + Gm23533 misc_RNA misc_RNA MGP_NODShiLtJ_T0026364.1 MGP_NODShiLtJ_G0017437.1 mouse_genomes_project 10 90982069 90999191 - MGP_NODShiLtJ_P0026364 Zfp938 protein_coding protein_coding MGP_NODShiLtJ_T0026365.1 MGP_NODShiLtJ_G0017437.1 mouse_genomes_project 10 90982073 90999198 - MGP_NODShiLtJ_P0026365 Zfp938 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098628.1 MGP_NODShiLtJ_G0037022.1 mouse_genomes_project 10 70773793 70773901 - Gm23854 snRNA snRNA MGP_NODShiLtJ_T0027305.1 MGP_NODShiLtJ_G0017733.1 mouse_genomes_project 10 144936422 144944591 - MGP_NODShiLtJ_P0027305 Pa2g4 protein_coding protein_coding MGP_NODShiLtJ_T0027306.1 MGP_NODShiLtJ_G0017733.1 mouse_genomes_project 10 144938094 144944484 - MGP_NODShiLtJ_P0027306 Pa2g4 protein_coding protein_coding MGP_NODShiLtJ_T0027307.1 MGP_NODShiLtJ_G0017733.1 mouse_genomes_project 10 144941808 144944526 - Pa2g4 protein_coding retained_intron MGP_NODShiLtJ_T0024737.1 MGP_NODShiLtJ_G0017008.1 mouse_genomes_project 10 38934531 38963179 + MGP_NODShiLtJ_P0024737 Hdac2 protein_coding protein_coding MGP_NODShiLtJ_T0024738.1 MGP_NODShiLtJ_G0017008.1 mouse_genomes_project 10 38934557 38956273 + MGP_NODShiLtJ_P0024738 Hdac2 protein_coding protein_coding MGP_NODShiLtJ_T0024739.1 MGP_NODShiLtJ_G0017008.1 mouse_genomes_project 10 38951941 38963178 + Hdac2 protein_coding processed_transcript MGP_NODShiLtJ_T0024740.1 MGP_NODShiLtJ_G0017008.1 mouse_genomes_project 10 38959461 38962901 + Hdac2 protein_coding retained_intron MGP_NODShiLtJ_T0024890.1 MGP_NODShiLtJ_G0017051.1 mouse_genomes_project 10 45255401 45256311 + Ostm1 protein_coding processed_transcript MGP_NODShiLtJ_T0024891.1 MGP_NODShiLtJ_G0017051.1 mouse_genomes_project 10 45255414 45389279 + MGP_NODShiLtJ_P0024891 Ostm1 protein_coding protein_coding MGP_NODShiLtJ_T0024892.1 MGP_NODShiLtJ_G0017051.1 mouse_genomes_project 10 45255417 45391448 + MGP_NODShiLtJ_P0024892 Ostm1 protein_coding protein_coding MGP_NODShiLtJ_T0024893.1 MGP_NODShiLtJ_G0017051.1 mouse_genomes_project 10 45366509 45393415 + MGP_NODShiLtJ_P0024893 Ostm1 protein_coding protein_coding MGP_NODShiLtJ_T0024894.1 MGP_NODShiLtJ_G0017051.1 mouse_genomes_project 10 45366559 45390947 + Ostm1 protein_coding retained_intron MGP_NODShiLtJ_T0025212.1 MGP_NODShiLtJ_G0017153.1 mouse_genomes_project 10 68429195 68482712 - MGP_NODShiLtJ_P0025212 Tspan15 protein_coding protein_coding MGP_NODShiLtJ_T0026574.1 MGP_NODShiLtJ_G0017498.1 mouse_genomes_project 10 98958473 98997096 - MGP_NODShiLtJ_P0026574 Gas2l3 protein_coding protein_coding MGP_NODShiLtJ_T0026575.1 MGP_NODShiLtJ_G0017498.1 mouse_genomes_project 10 98958473 98997096 - MGP_NODShiLtJ_P0026575 Gas2l3 protein_coding protein_coding MGP_NODShiLtJ_T0027089.1 MGP_NODShiLtJ_G0017664.1 mouse_genomes_project 10 143214386 143219392 - MGP_NODShiLtJ_P0027089 March9 protein_coding protein_coding MGP_NODShiLtJ_T0024743.1 MGP_NODShiLtJ_G0017011.1 mouse_genomes_project 10 41270107 41319348 + Lama4 protein_coding retained_intron MGP_NODShiLtJ_T0024744.1 MGP_NODShiLtJ_G0017011.1 mouse_genomes_project 10 41270107 41440765 + MGP_NODShiLtJ_P0024744 Lama4 protein_coding protein_coding MGP_NODShiLtJ_T0024745.1 MGP_NODShiLtJ_G0017011.1 mouse_genomes_project 10 41270145 41361176 + Lama4 protein_coding retained_intron MGP_NODShiLtJ_T0024746.1 MGP_NODShiLtJ_G0017011.1 mouse_genomes_project 10 41270162 41348291 + Lama4 protein_coding retained_intron MGP_NODShiLtJ_T0024747.1 MGP_NODShiLtJ_G0017011.1 mouse_genomes_project 10 41270264 41371472 + Lama4 protein_coding retained_intron MGP_NODShiLtJ_T0024748.1 MGP_NODShiLtJ_G0017011.1 mouse_genomes_project 10 41370757 41374620 + Lama4 protein_coding retained_intron MGP_NODShiLtJ_T0024749.1 MGP_NODShiLtJ_G0017011.1 mouse_genomes_project 10 41436359 41440674 + Lama4 protein_coding retained_intron MGP_NODShiLtJ_T0026895.1 MGP_NODShiLtJ_G0017601.1 mouse_genomes_project 10 129982834 130136413 - MGP_NODShiLtJ_P0026895 Lgr5 protein_coding protein_coding MGP_NODShiLtJ_T0026896.1 MGP_NODShiLtJ_G0017601.1 mouse_genomes_project 10 129984536 130136126 - MGP_NODShiLtJ_P0026896 Lgr5 protein_coding protein_coding MGP_NODShiLtJ_T0026897.1 MGP_NODShiLtJ_G0017601.1 mouse_genomes_project 10 129984536 130136126 - MGP_NODShiLtJ_P0026897 Lgr5 protein_coding protein_coding MGP_NODShiLtJ_T0026898.1 MGP_NODShiLtJ_G0017601.1 mouse_genomes_project 10 129989162 129991509 - Lgr5 protein_coding retained_intron MGP_NODShiLtJ_T0026899.1 MGP_NODShiLtJ_G0017601.1 mouse_genomes_project 10 129990359 129996276 - Lgr5 protein_coding retained_intron MGP_NODShiLtJ_T0026900.1 MGP_NODShiLtJ_G0017601.1 mouse_genomes_project 10 129995860 130136392 - Lgr5 protein_coding retained_intron MGP_NODShiLtJ_T0026901.1 MGP_NODShiLtJ_G0017601.1 mouse_genomes_project 10 130006555 130136392 - Lgr5 protein_coding retained_intron MGP_NODShiLtJ_T0026902.1 MGP_NODShiLtJ_G0017601.1 mouse_genomes_project 10 130065345 130136376 - Lgr5 protein_coding processed_transcript MGP_NODShiLtJ_T0012293.1 MGP_NODShiLtJ_G0010401.1 mouse_genomes_project 10 63623806 63624254 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099834.1 MGP_NODShiLtJ_G0038228.1 mouse_genomes_project 10 9166638 9166805 - Gm25979 snoRNA snoRNA MGP_NODShiLtJ_T0006053.1 MGP_NODShiLtJ_G0005061.1 mouse_genomes_project 10 89315994 89321961 + Gm26541 lincRNA lincRNA MGP_NODShiLtJ_T0027157.1 MGP_NODShiLtJ_G0017684.1 mouse_genomes_project 10 143727070 143734220 + MGP_NODShiLtJ_P0027157 Stac3 protein_coding protein_coding MGP_NODShiLtJ_T0027158.1 MGP_NODShiLtJ_G0017684.1 mouse_genomes_project 10 143727078 143728223 + MGP_NODShiLtJ_P0027158 Stac3 protein_coding protein_coding MGP_NODShiLtJ_T0027159.1 MGP_NODShiLtJ_G0017684.1 mouse_genomes_project 10 143727101 143734212 + MGP_NODShiLtJ_P0027159 Stac3 protein_coding protein_coding MGP_NODShiLtJ_T0027160.1 MGP_NODShiLtJ_G0017684.1 mouse_genomes_project 10 143729875 143732885 + Stac3 protein_coding retained_intron MGP_NODShiLtJ_T0027161.1 MGP_NODShiLtJ_G0017684.1 mouse_genomes_project 10 143732611 143733389 + Stac3 protein_coding retained_intron MGP_NODShiLtJ_T0027263.1 MGP_NODShiLtJ_G0017717.1 mouse_genomes_project 10 144598689 144622528 + MGP_NODShiLtJ_P0027263 Stat2 protein_coding protein_coding MGP_NODShiLtJ_T0027264.1 MGP_NODShiLtJ_G0017717.1 mouse_genomes_project 10 144598689 144622528 + MGP_NODShiLtJ_P0027264 Stat2 protein_coding protein_coding MGP_NODShiLtJ_T0009549.1 MGP_NODShiLtJ_G0007682.1 mouse_genomes_project 10 143153930 143154051 + Mir546 miRNA miRNA MGP_NODShiLtJ_T0027204.1 MGP_NODShiLtJ_G0017702.1 mouse_genomes_project 10 144138435 144143930 - MGP_NODShiLtJ_P0027204 Rdh7 protein_coding protein_coding MGP_NODShiLtJ_T0027205.1 MGP_NODShiLtJ_G0017702.1 mouse_genomes_project 10 144142586 144143443 - Rdh7 protein_coding processed_transcript MGP_NODShiLtJ_T0027232.1 MGP_NODShiLtJ_G0017710.1 mouse_genomes_project 10 144409789 144476135 - MGP_NODShiLtJ_P0027232 Rbms2 protein_coding protein_coding MGP_NODShiLtJ_T0027233.1 MGP_NODShiLtJ_G0017710.1 mouse_genomes_project 10 144411484 144475982 - MGP_NODShiLtJ_P0027233 Rbms2 protein_coding protein_coding MGP_NODShiLtJ_T0027381.1 MGP_NODShiLtJ_G0017777.1 mouse_genomes_project 10 145978989 145981046 + MGP_NODShiLtJ_P0027381 protein_coding protein_coding MGP_NODShiLtJ_T0006014.1 MGP_NODShiLtJ_G0005031.1 mouse_genomes_project 10 17374540 17377595 + Gm10827 lincRNA lincRNA MGP_NODShiLtJ_T0012259.1 MGP_NODShiLtJ_G0010367.1 mouse_genomes_project 10 808291 808600 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009535.1 MGP_NODShiLtJ_G0007668.1 mouse_genomes_project 10 116362473 116362581 + Mir6411 miRNA miRNA MGP_NODShiLtJ_T0098146.1 MGP_NODShiLtJ_G0036558.1 mouse_genomes_project 10 29362719 29362873 - Gm22811 ribozyme ribozyme MGP_NODShiLtJ_T0009490.1 MGP_NODShiLtJ_G0007623.1 mouse_genomes_project 10 48011535 48011615 - Gm23766 miRNA miRNA MGP_NODShiLtJ_T0025059.1 MGP_NODShiLtJ_G0017111.1 mouse_genomes_project 10 64620986 64625591 - MGP_NODShiLtJ_P0025059 Gm17542 protein_coding protein_coding MGP_NODShiLtJ_T0003000.1 MGP_NODShiLtJ_G0002800.1 mouse_genomes_project 10 84057462 84058764 - Gm16220 antisense antisense MGP_NODShiLtJ_T0026738.1 MGP_NODShiLtJ_G0017534.1 mouse_genomes_project 10 105632284 105650683 - MGP_NODShiLtJ_P0026738 Nudt4 protein_coding protein_coding MGP_NODShiLtJ_T0025774.1 MGP_NODShiLtJ_G0017278.1 mouse_genomes_project 10 86346850 86357019 + MGP_NODShiLtJ_P0025774 Icosl protein_coding protein_coding MGP_NODShiLtJ_T0098610.1 MGP_NODShiLtJ_G0037004.1 mouse_genomes_project 10 31646123 31646230 - Gm24168 snRNA snRNA MGP_NODShiLtJ_T0024714.1 MGP_NODShiLtJ_G0016995.1 mouse_genomes_project 10 35344739 35344805 - MGP_NODShiLtJ_P0024714 Gm17567 protein_coding protein_coding MGP_NODShiLtJ_T0025336.1 MGP_NODShiLtJ_G0017182.1 mouse_genomes_project 10 74336075 74355599 - MGP_NODShiLtJ_P0025336 Nrbf2 protein_coding protein_coding MGP_NODShiLtJ_T0025337.1 MGP_NODShiLtJ_G0017182.1 mouse_genomes_project 10 74337226 74355474 - MGP_NODShiLtJ_P0025337 Nrbf2 protein_coding protein_coding MGP_NODShiLtJ_T0009516.1 MGP_NODShiLtJ_G0007649.1 mouse_genomes_project 10 89761860 89761920 - Mir5615-1 miRNA miRNA MGP_NODShiLtJ_T0025630.1 MGP_NODShiLtJ_G0017243.1 mouse_genomes_project 10 84587592 84640108 + MGP_NODShiLtJ_P0025630 Mcm3ap protein_coding protein_coding MGP_NODShiLtJ_T0025036.1 MGP_NODShiLtJ_G0017103.1 mouse_genomes_project 10 63636720 63647866 + MGP_NODShiLtJ_P0025036 Smpdl3a protein_coding protein_coding MGP_NODShiLtJ_T0025037.1 MGP_NODShiLtJ_G0017103.1 mouse_genomes_project 10 63636759 63658570 + MGP_NODShiLtJ_P0025037 Smpdl3a protein_coding protein_coding MGP_NODShiLtJ_T0025038.1 MGP_NODShiLtJ_G0017103.1 mouse_genomes_project 10 63636953 63653157 + Smpdl3a protein_coding processed_transcript MGP_NODShiLtJ_T0026447.1 MGP_NODShiLtJ_G0017464.1 mouse_genomes_project 10 94545572 94834925 + MGP_NODShiLtJ_P0026447 Btbd11 protein_coding protein_coding MGP_NODShiLtJ_T0026448.1 MGP_NODShiLtJ_G0017464.1 mouse_genomes_project 10 94545585 94815175 + MGP_NODShiLtJ_P0026448 Btbd11 protein_coding protein_coding MGP_NODShiLtJ_T0026449.1 MGP_NODShiLtJ_G0017464.1 mouse_genomes_project 10 94771130 94834925 + MGP_NODShiLtJ_P0026449 Btbd11 protein_coding protein_coding MGP_NODShiLtJ_T0026450.1 MGP_NODShiLtJ_G0017464.1 mouse_genomes_project 10 94771140 94778757 + Btbd11 protein_coding processed_transcript MGP_NODShiLtJ_T0026451.1 MGP_NODShiLtJ_G0017464.1 mouse_genomes_project 10 94803110 94816214 + Btbd11 protein_coding retained_intron MGP_NODShiLtJ_T0026452.1 MGP_NODShiLtJ_G0017464.1 mouse_genomes_project 10 94814153 94834922 + Btbd11 protein_coding processed_transcript MGP_NODShiLtJ_T0026453.1 MGP_NODShiLtJ_G0017464.1 mouse_genomes_project 10 94819787 94834925 + Btbd11 protein_coding retained_intron MGP_NODShiLtJ_T0026454.1 MGP_NODShiLtJ_G0017464.1 mouse_genomes_project 10 94828770 94832893 + Btbd11 protein_coding retained_intron MGP_NODShiLtJ_T0024722.1 MGP_NODShiLtJ_G0017002.1 mouse_genomes_project 10 35660247 35663325 + MGP_NODShiLtJ_P0024722 Tspyl1 protein_coding protein_coding MGP_NODShiLtJ_T0026455.1 MGP_NODShiLtJ_G0017465.1 mouse_genomes_project 10 95116811 95134100 + MGP_NODShiLtJ_P0026455 Pwp1 protein_coding protein_coding MGP_NODShiLtJ_T0026456.1 MGP_NODShiLtJ_G0017465.1 mouse_genomes_project 10 95116864 95129692 + Pwp1 protein_coding retained_intron MGP_NODShiLtJ_T0026457.1 MGP_NODShiLtJ_G0017465.1 mouse_genomes_project 10 95116886 95127099 + MGP_NODShiLtJ_P0026457 Pwp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026458.1 MGP_NODShiLtJ_G0017465.1 mouse_genomes_project 10 95121234 95129491 + Pwp1 protein_coding retained_intron MGP_NODShiLtJ_T0026667.1 MGP_NODShiLtJ_G0017514.1 mouse_genomes_project 10 103408329 103443483 + MGP_NODShiLtJ_P0026667 Hal protein_coding protein_coding MGP_NODShiLtJ_T0026668.1 MGP_NODShiLtJ_G0017514.1 mouse_genomes_project 10 103408364 103440700 + MGP_NODShiLtJ_P0026668 Hal protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026669.1 MGP_NODShiLtJ_G0017514.1 mouse_genomes_project 10 103418818 103422992 + Hal protein_coding retained_intron MGP_NODShiLtJ_T0026670.1 MGP_NODShiLtJ_G0017514.1 mouse_genomes_project 10 103423459 103440913 + Hal protein_coding processed_transcript MGP_NODShiLtJ_T0026621.1 MGP_NODShiLtJ_G0017505.1 mouse_genomes_project 10 100698406 100815285 - MGP_NODShiLtJ_P0026621 Apaf1 protein_coding protein_coding MGP_NODShiLtJ_T0026622.1 MGP_NODShiLtJ_G0017505.1 mouse_genomes_project 10 100698408 100700687 - Apaf1 protein_coding retained_intron MGP_NODShiLtJ_T0026623.1 MGP_NODShiLtJ_G0017505.1 mouse_genomes_project 10 100698413 100815393 - MGP_NODShiLtJ_P0026623 Apaf1 protein_coding protein_coding MGP_NODShiLtJ_T0026624.1 MGP_NODShiLtJ_G0017505.1 mouse_genomes_project 10 100699698 100815327 - MGP_NODShiLtJ_P0026624 Apaf1 protein_coding protein_coding MGP_NODShiLtJ_T0026625.1 MGP_NODShiLtJ_G0017505.1 mouse_genomes_project 10 100720112 100724783 - Apaf1 protein_coding processed_transcript MGP_NODShiLtJ_T0026626.1 MGP_NODShiLtJ_G0017505.1 mouse_genomes_project 10 100721112 100724094 - Apaf1 protein_coding retained_intron MGP_NODShiLtJ_T0026627.1 MGP_NODShiLtJ_G0017505.1 mouse_genomes_project 10 100795087 100815052 - MGP_NODShiLtJ_P0026627 Apaf1 protein_coding protein_coding MGP_NODShiLtJ_T0026628.1 MGP_NODShiLtJ_G0017505.1 mouse_genomes_project 10 100798206 100815393 - MGP_NODShiLtJ_P0026628 Apaf1 protein_coding protein_coding MGP_NODShiLtJ_T0025660.1 MGP_NODShiLtJ_G0017250.1 mouse_genomes_project 10 85168063 85179510 + MGP_NODShiLtJ_P0025660 Gm10787 protein_coding protein_coding MGP_NODShiLtJ_T0025148.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67226880 67283453 - MGP_NODShiLtJ_P0025148 Sgpl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025149.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67226887 67283385 - MGP_NODShiLtJ_P0025149 Sgpl1 protein_coding protein_coding MGP_NODShiLtJ_T0025150.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67226887 67283355 - MGP_NODShiLtJ_P0025150 Sgpl1 protein_coding protein_coding MGP_NODShiLtJ_T0025151.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67226890 67283355 - MGP_NODShiLtJ_P0025151 Sgpl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025152.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67229070 67231371 - Sgpl1 protein_coding retained_intron MGP_NODShiLtJ_T0025153.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67232440 67233723 - Sgpl1 protein_coding retained_intron MGP_NODShiLtJ_T0025154.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67241359 67283414 - MGP_NODShiLtJ_P0025154 Sgpl1 protein_coding protein_coding MGP_NODShiLtJ_T0025155.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67243273 67283387 - MGP_NODShiLtJ_P0025155 Sgpl1 protein_coding protein_coding MGP_NODShiLtJ_T0025156.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67247411 67283363 - Sgpl1 protein_coding processed_transcript MGP_NODShiLtJ_T0025157.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67253286 67282541 - MGP_NODShiLtJ_P0025157 Sgpl1 protein_coding protein_coding MGP_NODShiLtJ_T0025158.1 MGP_NODShiLtJ_G0017134.1 mouse_genomes_project 10 67281537 67283315 - Sgpl1 protein_coding retained_intron MGP_NODShiLtJ_T0025182.1 MGP_NODShiLtJ_G0017145.1 mouse_genomes_project 10 67887573 67900559 + MGP_NODShiLtJ_P0025182 Sar1a protein_coding protein_coding MGP_NODShiLtJ_T0024866.1 MGP_NODShiLtJ_G0017045.1 mouse_genomes_project 10 44414369 44517947 + MGP_NODShiLtJ_P0024866 Sesn1 protein_coding protein_coding MGP_NODShiLtJ_T0024867.1 MGP_NODShiLtJ_G0017045.1 mouse_genomes_project 10 44491803 44517947 + MGP_NODShiLtJ_P0024867 Sesn1 protein_coding protein_coding MGP_NODShiLtJ_T0027276.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144764752 144773112 - MGP_NODShiLtJ_P0027276 Nabp2 protein_coding protein_coding MGP_NODShiLtJ_T0027277.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144764752 144773258 - MGP_NODShiLtJ_P0027277 Nabp2 protein_coding protein_coding MGP_NODShiLtJ_T0027278.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144764831 144773106 - MGP_NODShiLtJ_P0027278 Nabp2 protein_coding protein_coding MGP_NODShiLtJ_T0027279.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144764947 144772227 - Nabp2 protein_coding retained_intron MGP_NODShiLtJ_T0027280.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144765257 144773016 - MGP_NODShiLtJ_P0027280 Nabp2 protein_coding protein_coding MGP_NODShiLtJ_T0027281.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144765267 144773935 - MGP_NODShiLtJ_P0027281 Nabp2 protein_coding protein_coding MGP_NODShiLtJ_T0027282.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144771546 144772564 - MGP_NODShiLtJ_P0027282 Nabp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027283.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144772102 144774876 - MGP_NODShiLtJ_P0027283 Nabp2 protein_coding protein_coding MGP_NODShiLtJ_T0027284.1 MGP_NODShiLtJ_G0017725.1 mouse_genomes_project 10 144772130 144773120 - MGP_NODShiLtJ_P0027284 Nabp2 protein_coding protein_coding MGP_NODShiLtJ_T0025574.1 MGP_NODShiLtJ_G0017221.1 mouse_genomes_project 10 83805951 83807755 - MGP_NODShiLtJ_P0025574 Ddt protein_coding protein_coding MGP_NODShiLtJ_T0025575.1 MGP_NODShiLtJ_G0017221.1 mouse_genomes_project 10 83805954 83808135 - MGP_NODShiLtJ_P0025575 Ddt protein_coding protein_coding MGP_NODShiLtJ_T0024709.1 MGP_NODShiLtJ_G0016991.1 mouse_genomes_project 10 35068921 35085689 - MGP_NODShiLtJ_P0024709 Sult3a2 protein_coding protein_coding MGP_NODShiLtJ_T0025034.1 MGP_NODShiLtJ_G0017102.1 mouse_genomes_project 10 63627279 63630849 + MGP_NODShiLtJ_P0025034 Fabp7 protein_coding protein_coding MGP_NODShiLtJ_T0025035.1 MGP_NODShiLtJ_G0017102.1 mouse_genomes_project 10 63627321 63629211 + MGP_NODShiLtJ_P0025035 Fabp7 protein_coding protein_coding MGP_NODShiLtJ_T0017007.1 MGP_NODShiLtJ_G0015009.1 mouse_genomes_project 10 95977232 95978209 - processed_transcript processed_transcript MGP_NODShiLtJ_T0027202.1 MGP_NODShiLtJ_G0017700.1 mouse_genomes_project 10 144100298 144114865 + MGP_NODShiLtJ_P0027202 Rdh19 protein_coding protein_coding MGP_NODShiLtJ_T0000803.1 MGP_NODShiLtJ_G0000734.1 mouse_genomes_project 10 96600463 96602792 + TEC TEC MGP_NODShiLtJ_T0000804.1 MGP_NODShiLtJ_G0000734.1 mouse_genomes_project 10 96601702 96602080 + TEC TEC MGP_NODShiLtJ_T0025842.1 MGP_NODShiLtJ_G0017310.1 mouse_genomes_project 10 88151397 88156930 - MGP_NODShiLtJ_P0025842 Odf3l2 protein_coding protein_coding MGP_NODShiLtJ_T0027389.1 MGP_NODShiLtJ_G0017783.1 mouse_genomes_project 10 146171326 146172262 + MGP_NODShiLtJ_P0027389 Olfr799 protein_coding protein_coding MGP_NODShiLtJ_T0098625.1 MGP_NODShiLtJ_G0037019.1 mouse_genomes_project 10 62904968 62905068 + Gm24285 snRNA snRNA MGP_NODShiLtJ_T0025282.1 MGP_NODShiLtJ_G0017169.1 mouse_genomes_project 10 69329525 69340998 + Rufy2 protein_coding retained_intron MGP_NODShiLtJ_T0025283.1 MGP_NODShiLtJ_G0017169.1 mouse_genomes_project 10 69329541 69356841 + MGP_NODShiLtJ_P0025283 Rufy2 protein_coding protein_coding MGP_NODShiLtJ_T0025284.1 MGP_NODShiLtJ_G0017169.1 mouse_genomes_project 10 69329544 69369782 + MGP_NODShiLtJ_P0025284 Rufy2 protein_coding protein_coding MGP_NODShiLtJ_T0025285.1 MGP_NODShiLtJ_G0017169.1 mouse_genomes_project 10 69329554 69373037 + MGP_NODShiLtJ_P0025285 Rufy2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025286.1 MGP_NODShiLtJ_G0017169.1 mouse_genomes_project 10 69329564 69356814 + MGP_NODShiLtJ_P0025286 Rufy2 protein_coding protein_coding MGP_NODShiLtJ_T0025287.1 MGP_NODShiLtJ_G0017169.1 mouse_genomes_project 10 69329595 69354594 + MGP_NODShiLtJ_P0025287 Rufy2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025288.1 MGP_NODShiLtJ_G0017169.1 mouse_genomes_project 10 69330730 69339877 + MGP_NODShiLtJ_P0025288 Rufy2 protein_coding protein_coding MGP_NODShiLtJ_T0025289.1 MGP_NODShiLtJ_G0017169.1 mouse_genomes_project 10 69354631 69362764 + Rufy2 protein_coding retained_intron MGP_NODShiLtJ_T0027290.1 MGP_NODShiLtJ_G0017728.1 mouse_genomes_project 10 144860021 144864410 - MGP_NODShiLtJ_P0027290 Myl6 protein_coding protein_coding MGP_NODShiLtJ_T0027291.1 MGP_NODShiLtJ_G0017728.1 mouse_genomes_project 10 144860897 144864346 - MGP_NODShiLtJ_P0027291 Myl6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025870.1 MGP_NODShiLtJ_G0017320.1 mouse_genomes_project 10 88302753 88308108 + MGP_NODShiLtJ_P0025870 Fstl3 protein_coding protein_coding MGP_NODShiLtJ_T0025871.1 MGP_NODShiLtJ_G0017320.1 mouse_genomes_project 10 88302773 88304571 + Fstl3 protein_coding retained_intron MGP_NODShiLtJ_T0025872.1 MGP_NODShiLtJ_G0017320.1 mouse_genomes_project 10 88306058 88308085 + Fstl3 protein_coding processed_transcript MGP_NODShiLtJ_T0009537.1 MGP_NODShiLtJ_G0007670.1 mouse_genomes_project 10 121564929 121565023 + Gm25591 miRNA miRNA MGP_NODShiLtJ_T0099829.1 MGP_NODShiLtJ_G0038223.1 mouse_genomes_project 10 1133736 1133868 + Gm25369 snoRNA snoRNA MGP_NODShiLtJ_T0024367.1 MGP_NODShiLtJ_G0016879.1 mouse_genomes_project 10 9102543 9121281 + MGP_NODShiLtJ_P0024367 Fbxo30 protein_coding protein_coding MGP_NODShiLtJ_T0024368.1 MGP_NODShiLtJ_G0016879.1 mouse_genomes_project 10 9102803 9118750 + MGP_NODShiLtJ_P0024368 Fbxo30 protein_coding protein_coding MGP_NODShiLtJ_T0025060.1 MGP_NODShiLtJ_G0017112.1 mouse_genomes_project 10 64721958 64977256 + MGP_NODShiLtJ_P0025060 Sh3rf3 protein_coding protein_coding MGP_NODShiLtJ_T0025061.1 MGP_NODShiLtJ_G0017112.1 mouse_genomes_project 10 64722057 65073629 + MGP_NODShiLtJ_P0025061 Sh3rf3 protein_coding protein_coding MGP_NODShiLtJ_T0025062.1 MGP_NODShiLtJ_G0017112.1 mouse_genomes_project 10 64722658 64934465 + Sh3rf3 protein_coding retained_intron MGP_NODShiLtJ_T0025063.1 MGP_NODShiLtJ_G0017112.1 mouse_genomes_project 10 64997398 65038597 + Sh3rf3 protein_coding retained_intron MGP_NODShiLtJ_T0025064.1 MGP_NODShiLtJ_G0017112.1 mouse_genomes_project 10 65012667 65038075 + Sh3rf3 protein_coding processed_transcript MGP_NODShiLtJ_T0012292.1 MGP_NODShiLtJ_G0010400.1 mouse_genomes_project 10 63430228 63430784 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026579.1 MGP_NODShiLtJ_G0017500.1 mouse_genomes_project 10 99151154 99204363 - MGP_NODShiLtJ_P0026579 Slc17a8 protein_coding protein_coding MGP_NODShiLtJ_T0026885.1 MGP_NODShiLtJ_G0017595.1 mouse_genomes_project 10 129574921 129689908 - MGP_NODShiLtJ_P0026885 Tph2 protein_coding protein_coding MGP_NODShiLtJ_T0026886.1 MGP_NODShiLtJ_G0017595.1 mouse_genomes_project 10 129678960 129680436 - Tph2 protein_coding processed_transcript MGP_NODShiLtJ_T0025065.1 MGP_NODShiLtJ_G0017113.1 mouse_genomes_project 10 65101324 65165501 - MGP_NODShiLtJ_P0025065 Sept10 protein_coding protein_coding MGP_NODShiLtJ_T0099865.1 MGP_NODShiLtJ_G0038259.1 mouse_genomes_project 10 76384614 76384731 + Gm24172 snoRNA snoRNA MGP_NODShiLtJ_T0006012.1 MGP_NODShiLtJ_G0005029.1 mouse_genomes_project 10 12035478 12079034 - Gm26835 lincRNA lincRNA MGP_NODShiLtJ_T0016975.1 MGP_NODShiLtJ_G0015000.1 mouse_genomes_project 10 5195855 5212373 - Gm20470 processed_transcript processed_transcript MGP_NODShiLtJ_T0027001.1 MGP_NODShiLtJ_G0017634.1 mouse_genomes_project 10 135269497 135337624 - MGP_NODShiLtJ_P0027001 Irak3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027002.1 MGP_NODShiLtJ_G0017634.1 mouse_genomes_project 10 135270049 135337585 - MGP_NODShiLtJ_P0027002 Irak3 protein_coding protein_coding MGP_NODShiLtJ_T0027003.1 MGP_NODShiLtJ_G0017634.1 mouse_genomes_project 10 135292647 135304993 - Irak3 protein_coding processed_transcript MGP_NODShiLtJ_T0027004.1 MGP_NODShiLtJ_G0017634.1 mouse_genomes_project 10 135298441 135337713 - Irak3 protein_coding retained_intron MGP_NODShiLtJ_T0099866.1 MGP_NODShiLtJ_G0038260.1 mouse_genomes_project 10 79363251 79363382 + Gm22937 snoRNA snoRNA MGP_NODShiLtJ_T0025721.1 MGP_NODShiLtJ_G0017265.1 mouse_genomes_project 10 85949947 85950618 + MGP_NODShiLtJ_P0025721 Krtap12-1 protein_coding protein_coding MGP_NODShiLtJ_T0009491.1 MGP_NODShiLtJ_G0007624.1 mouse_genomes_project 10 48835853 48835968 - Gm27410 miRNA miRNA MGP_NODShiLtJ_T0025426.1 MGP_NODShiLtJ_G0017195.1 mouse_genomes_project 10 77443985 77551969 + MGP_NODShiLtJ_P0025426 Ccdc6 protein_coding protein_coding MGP_NODShiLtJ_T0025427.1 MGP_NODShiLtJ_G0017195.1 mouse_genomes_project 10 77532147 77540964 + Ccdc6 protein_coding retained_intron MGP_NODShiLtJ_T0025428.1 MGP_NODShiLtJ_G0017195.1 mouse_genomes_project 10 77532649 77546934 + MGP_NODShiLtJ_P0025428 Ccdc6 protein_coding protein_coding MGP_NODShiLtJ_T0025429.1 MGP_NODShiLtJ_G0017195.1 mouse_genomes_project 10 77532685 77546948 + MGP_NODShiLtJ_P0025429 Ccdc6 protein_coding protein_coding MGP_NODShiLtJ_T0027377.1 MGP_NODShiLtJ_G0017773.1 mouse_genomes_project 10 145941109 145944624 + MGP_NODShiLtJ_P0027377 Olfr787 protein_coding protein_coding MGP_NODShiLtJ_T0025705.1 MGP_NODShiLtJ_G0017259.1 mouse_genomes_project 10 85818527 85856301 + MGP_NODShiLtJ_P0025705 Sumo3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025706.1 MGP_NODShiLtJ_G0017259.1 mouse_genomes_project 10 85818539 85828862 + MGP_NODShiLtJ_P0025706 Sumo3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025707.1 MGP_NODShiLtJ_G0017259.1 mouse_genomes_project 10 85818555 85828459 + MGP_NODShiLtJ_P0025707 Sumo3 protein_coding protein_coding MGP_NODShiLtJ_T0025708.1 MGP_NODShiLtJ_G0017259.1 mouse_genomes_project 10 85818555 85828795 + MGP_NODShiLtJ_P0025708 Sumo3 protein_coding protein_coding MGP_NODShiLtJ_T0025709.1 MGP_NODShiLtJ_G0017259.1 mouse_genomes_project 10 85818651 85828410 + MGP_NODShiLtJ_P0025709 Sumo3 protein_coding protein_coding MGP_NODShiLtJ_T0025710.1 MGP_NODShiLtJ_G0017259.1 mouse_genomes_project 10 85818901 85829574 + MGP_NODShiLtJ_P0025710 Sumo3 protein_coding protein_coding MGP_NODShiLtJ_T0025711.1 MGP_NODShiLtJ_G0017259.1 mouse_genomes_project 10 85822051 85829050 + MGP_NODShiLtJ_P0025711 Sumo3 protein_coding protein_coding MGP_NODShiLtJ_T0025712.1 MGP_NODShiLtJ_G0017259.1 mouse_genomes_project 10 85827284 85828212 + Sumo3 protein_coding processed_transcript MGP_NODShiLtJ_T0027369.1 MGP_NODShiLtJ_G0017767.1 mouse_genomes_project 10 145797403 145798428 + MGP_NODShiLtJ_P0027369 Olfr780 protein_coding protein_coding MGP_NODShiLtJ_T0002966.1 MGP_NODShiLtJ_G0002774.1 mouse_genomes_project 10 12936705 12942013 - antisense antisense MGP_NODShiLtJ_T0097879.1 MGP_NODShiLtJ_G0036291.1 mouse_genomes_project 10 32068043 32068156 - n-R5s76 rRNA rRNA MGP_NODShiLtJ_T0025719.1 MGP_NODShiLtJ_G0017263.1 mouse_genomes_project 10 85940815 85941368 + MGP_NODShiLtJ_P0025719 Gm10024 protein_coding protein_coding MGP_NODShiLtJ_T0027384.1 MGP_NODShiLtJ_G0017780.1 mouse_genomes_project 10 146067919 146071730 + MGP_NODShiLtJ_P0027384 Olfr794 protein_coding protein_coding MGP_NODShiLtJ_T0027385.1 MGP_NODShiLtJ_G0017780.1 mouse_genomes_project 10 146070767 146071730 + MGP_NODShiLtJ_P0027385 Olfr794 protein_coding protein_coding MGP_NODShiLtJ_T0024492.1 MGP_NODShiLtJ_G0016910.1 mouse_genomes_project 10 18552562 18554606 + MGP_NODShiLtJ_P0024492 Olig3 protein_coding protein_coding MGP_NODShiLtJ_T0024804.1 MGP_NODShiLtJ_G0017028.1 mouse_genomes_project 10 43044441 43082699 + MGP_NODShiLtJ_P0024804 Slc22a16 protein_coding protein_coding MGP_NODShiLtJ_T0024805.1 MGP_NODShiLtJ_G0017028.1 mouse_genomes_project 10 43044718 43082695 + MGP_NODShiLtJ_P0024805 Slc22a16 protein_coding protein_coding MGP_NODShiLtJ_T0026743.1 MGP_NODShiLtJ_G0017538.1 mouse_genomes_project 10 106854782 106862193 + MGP_NODShiLtJ_P0026743 Btg1 protein_coding protein_coding MGP_NODShiLtJ_T0099880.1 MGP_NODShiLtJ_G0038274.1 mouse_genomes_project 10 120017768 120017853 + Gm24745 snoRNA snoRNA MGP_NODShiLtJ_T0009552.1 MGP_NODShiLtJ_G0007685.1 mouse_genomes_project 10 144746195 144746264 + Mir6914 miRNA miRNA MGP_NODShiLtJ_T0026935.1 MGP_NODShiLtJ_G0017611.1 mouse_genomes_project 10 131671637 131689334 - MGP_NODShiLtJ_P0026935 Gm10271 protein_coding protein_coding MGP_NODShiLtJ_T0002999.1 MGP_NODShiLtJ_G0002799.1 mouse_genomes_project 10 83996756 83999583 - Gm867 antisense antisense MGP_NODShiLtJ_T0009525.1 MGP_NODShiLtJ_G0007658.1 mouse_genomes_project 10 101878758 101878858 - Mir135a-2 miRNA miRNA MGP_NODShiLtJ_T0098647.1 MGP_NODShiLtJ_G0037041.1 mouse_genomes_project 10 115957284 115957393 + Gm25143 snRNA snRNA MGP_NODShiLtJ_T0025661.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85191003 85201124 + MGP_NODShiLtJ_P0025661 Slc19a1 protein_coding protein_coding MGP_NODShiLtJ_T0025662.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85191033 85200610 + MGP_NODShiLtJ_P0025662 Slc19a1 protein_coding protein_coding MGP_NODShiLtJ_T0025663.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85191446 85209195 + MGP_NODShiLtJ_P0025663 Slc19a1 protein_coding protein_coding MGP_NODShiLtJ_T0025664.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85191974 85209194 + MGP_NODShiLtJ_P0025664 Slc19a1 protein_coding protein_coding MGP_NODShiLtJ_T0025665.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85192030 85205031 + MGP_NODShiLtJ_P0025665 Slc19a1 protein_coding protein_coding MGP_NODShiLtJ_T0025666.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85192043 85201719 + MGP_NODShiLtJ_P0025666 Slc19a1 protein_coding protein_coding MGP_NODShiLtJ_T0025667.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85192081 85201093 + MGP_NODShiLtJ_P0025667 Slc19a1 protein_coding protein_coding MGP_NODShiLtJ_T0025668.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85201262 85203661 + Slc19a1 protein_coding retained_intron MGP_NODShiLtJ_T0025669.1 MGP_NODShiLtJ_G0017251.1 mouse_genomes_project 10 85201553 85219765 + MGP_NODShiLtJ_P0025669 Slc19a1 protein_coding protein_coding MGP_NODShiLtJ_T0026360.1 MGP_NODShiLtJ_G0017435.1 mouse_genomes_project 10 90773438 90788850 + MGP_NODShiLtJ_P0026360 Zfp873 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026361.1 MGP_NODShiLtJ_G0017435.1 mouse_genomes_project 10 90783628 90786551 + MGP_NODShiLtJ_P0026361 Zfp873 protein_coding protein_coding MGP_NODShiLtJ_T0027415.1 MGP_NODShiLtJ_G0017803.1 mouse_genomes_project 10 146832219 146846675 - MGP_NODShiLtJ_P0027415 Olfr824 protein_coding protein_coding MGP_NODShiLtJ_T0025200.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68343930 68347326 - MGP_NODShiLtJ_P0025200 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025201.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68344485 68347221 - MGP_NODShiLtJ_P0025201 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025202.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68344485 68347244 - MGP_NODShiLtJ_P0025202 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025203.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68344485 68347326 - MGP_NODShiLtJ_P0025203 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025204.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68344487 68347289 - MGP_NODShiLtJ_P0025204 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025205.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68345110 68377337 - MGP_NODShiLtJ_P0025205 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025206.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68345192 68372183 - MGP_NODShiLtJ_P0025206 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025207.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68345193 68381497 - MGP_NODShiLtJ_P0025207 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025208.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68345195 68346772 - MGP_NODShiLtJ_P0025208 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025209.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68346222 68381501 - MGP_NODShiLtJ_P0025209 2010107G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0025211.1 MGP_NODShiLtJ_G0017151.1 mouse_genomes_project 10 68371997 68381511 - 2010107G23Rik protein_coding processed_transcript MGP_NODShiLtJ_T0024352.1 MGP_NODShiLtJ_G0016876.1 mouse_genomes_project 10 8423896 8424407 + MGP_NODShiLtJ_P0024352 Gm10944 protein_coding protein_coding MGP_NODShiLtJ_T0000793.1 MGP_NODShiLtJ_G0000724.1 mouse_genomes_project 10 18090879 18091169 - TEC TEC MGP_NODShiLtJ_T0026366.1 MGP_NODShiLtJ_G0017438.1 mouse_genomes_project 10 91143241 91148012 + MGP_NODShiLtJ_P0026366 Gm4924 protein_coding protein_coding MGP_NODShiLtJ_T0006013.1 MGP_NODShiLtJ_G0005030.1 mouse_genomes_project 10 15923383 16105609 - Gm20125 lincRNA lincRNA MGP_NODShiLtJ_T0025607.1 MGP_NODShiLtJ_G0017234.1 mouse_genomes_project 10 84101814 84113263 + MGP_NODShiLtJ_P0025607 Zfp280b protein_coding protein_coding MGP_NODShiLtJ_T0003021.1 MGP_NODShiLtJ_G0002817.1 mouse_genomes_project 10 95270575 95272464 - A230060F14Rik antisense antisense MGP_NODShiLtJ_T0003022.1 MGP_NODShiLtJ_G0002817.1 mouse_genomes_project 10 95271914 95272460 - A230060F14Rik antisense antisense MGP_NODShiLtJ_T0027137.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143596011 143666542 + MGP_NODShiLtJ_P0027137 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027138.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143596362 143724754 + MGP_NODShiLtJ_P0027138 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027139.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143607679 143724777 + MGP_NODShiLtJ_P0027139 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027140.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143607679 143724777 + MGP_NODShiLtJ_P0027140 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027141.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143642877 143673864 + MGP_NODShiLtJ_P0027141 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027142.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143643406 143724743 + MGP_NODShiLtJ_P0027142 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027143.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143643663 143724425 + MGP_NODShiLtJ_P0027143 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027144.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143643771 143674617 + MGP_NODShiLtJ_P0027144 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027145.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143666461 143724103 + MGP_NODShiLtJ_P0027145 R3hdm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027146.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143666461 143724778 + MGP_NODShiLtJ_P0027146 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027147.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143666461 143724103 + MGP_NODShiLtJ_P0027147 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027148.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143666461 143724761 + MGP_NODShiLtJ_P0027148 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027149.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143682282 143688000 + MGP_NODShiLtJ_P0027149 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027150.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143682308 143688130 + R3hdm2 protein_coding retained_intron MGP_NODShiLtJ_T0027151.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143682312 143724777 + MGP_NODShiLtJ_P0027151 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027152.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143682352 143708198 + R3hdm2 protein_coding processed_transcript MGP_NODShiLtJ_T0027153.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143705361 143708589 + R3hdm2 protein_coding retained_intron MGP_NODShiLtJ_T0027154.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143709335 143718058 + R3hdm2 protein_coding retained_intron MGP_NODShiLtJ_T0027155.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143709526 143720539 + MGP_NODShiLtJ_P0027155 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027156.1 MGP_NODShiLtJ_G0017683.1 mouse_genomes_project 10 143717990 143724761 + MGP_NODShiLtJ_P0027156 R3hdm2 protein_coding protein_coding MGP_NODShiLtJ_T0027175.1 MGP_NODShiLtJ_G0017689.1 mouse_genomes_project 10 143870832 143888819 + MGP_NODShiLtJ_P0027175 Stat6 protein_coding protein_coding MGP_NODShiLtJ_T0027176.1 MGP_NODShiLtJ_G0017689.1 mouse_genomes_project 10 143870848 143878625 + MGP_NODShiLtJ_P0027176 Stat6 protein_coding protein_coding MGP_NODShiLtJ_T0027177.1 MGP_NODShiLtJ_G0017689.1 mouse_genomes_project 10 143880936 143882873 + Stat6 protein_coding retained_intron MGP_NODShiLtJ_T0027178.1 MGP_NODShiLtJ_G0017689.1 mouse_genomes_project 10 143884622 143885919 + Stat6 protein_coding retained_intron MGP_NODShiLtJ_T0027179.1 MGP_NODShiLtJ_G0017689.1 mouse_genomes_project 10 143887261 143888049 + Stat6 protein_coding retained_intron MGP_NODShiLtJ_T0024199.1 MGP_NODShiLtJ_G0016844.1 mouse_genomes_project 10 1350495 1371336 - MGP_NODShiLtJ_P0024199 Zbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0025346.1 MGP_NODShiLtJ_G0017185.1 mouse_genomes_project 10 74657457 74659682 + MGP_NODShiLtJ_P0025346 Gm10797 protein_coding protein_coding MGP_NODShiLtJ_T0025577.1 MGP_NODShiLtJ_G0017223.1 mouse_genomes_project 10 83808835 83816135 - MGP_NODShiLtJ_P0025577 Gstt3 protein_coding protein_coding MGP_NODShiLtJ_T0025578.1 MGP_NODShiLtJ_G0017223.1 mouse_genomes_project 10 83809520 83811981 - Gstt3 protein_coding processed_transcript MGP_NODShiLtJ_T0025579.1 MGP_NODShiLtJ_G0017223.1 mouse_genomes_project 10 83809640 83815739 - MGP_NODShiLtJ_P0025579 Gstt3 protein_coding protein_coding MGP_NODShiLtJ_T0025580.1 MGP_NODShiLtJ_G0017223.1 mouse_genomes_project 10 83810120 83811585 - MGP_NODShiLtJ_P0025580 Gstt3 protein_coding protein_coding MGP_NODShiLtJ_T0025581.1 MGP_NODShiLtJ_G0017223.1 mouse_genomes_project 10 83811474 83815771 - MGP_NODShiLtJ_P0025581 Gstt3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006004.1 MGP_NODShiLtJ_G0005023.1 mouse_genomes_project 10 4414081 4416353 + Platr13 lincRNA lincRNA MGP_NODShiLtJ_T0025923.1 MGP_NODShiLtJ_G0017332.1 mouse_genomes_project 10 88457340 88462763 + MGP_NODShiLtJ_P0025923 Kiss1r protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027067.1 MGP_NODShiLtJ_G0017658.1 mouse_genomes_project 10 143127005 143155468 + MGP_NODShiLtJ_P0027067 Ctdsp2 protein_coding protein_coding MGP_NODShiLtJ_T0027068.1 MGP_NODShiLtJ_G0017658.1 mouse_genomes_project 10 143127526 143155466 + MGP_NODShiLtJ_P0027068 Ctdsp2 protein_coding protein_coding MGP_NODShiLtJ_T0027412.1 MGP_NODShiLtJ_G0017800.1 mouse_genomes_project 10 146703347 146704408 + MGP_NODShiLtJ_P0027412 Olfr820 protein_coding protein_coding MGP_NODShiLtJ_T0025072.1 MGP_NODShiLtJ_G0017117.1 mouse_genomes_project 10 65387344 65407629 - MGP_NODShiLtJ_P0025072 Oit3 protein_coding protein_coding MGP_NODShiLtJ_T0025073.1 MGP_NODShiLtJ_G0017117.1 mouse_genomes_project 10 65392390 65396227 - Oit3 protein_coding retained_intron MGP_NODShiLtJ_T0011166.1 MGP_NODShiLtJ_G0009299.1 mouse_genomes_project 10 101878333 101878488 - Gm27544 misc_RNA misc_RNA MGP_NODShiLtJ_T0002971.1 MGP_NODShiLtJ_G0002778.1 mouse_genomes_project 10 27608226 27621398 + antisense antisense MGP_NODShiLtJ_T0027117.1 MGP_NODShiLtJ_G0017676.1 mouse_genomes_project 10 143463202 143470137 - MGP_NODShiLtJ_P0027117 Mbd6 protein_coding protein_coding MGP_NODShiLtJ_T0027118.1 MGP_NODShiLtJ_G0017676.1 mouse_genomes_project 10 143463202 143470262 - MGP_NODShiLtJ_P0027118 Mbd6 protein_coding protein_coding MGP_NODShiLtJ_T0027119.1 MGP_NODShiLtJ_G0017676.1 mouse_genomes_project 10 143463202 143467147 - MGP_NODShiLtJ_P0027119 Mbd6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027120.1 MGP_NODShiLtJ_G0017676.1 mouse_genomes_project 10 143463202 143464915 - MGP_NODShiLtJ_P0027120 Mbd6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027121.1 MGP_NODShiLtJ_G0017676.1 mouse_genomes_project 10 143463922 143465605 - MGP_NODShiLtJ_P0027121 Mbd6 protein_coding protein_coding MGP_NODShiLtJ_T0027122.1 MGP_NODShiLtJ_G0017676.1 mouse_genomes_project 10 143464772 143465618 - MGP_NODShiLtJ_P0027122 Mbd6 protein_coding protein_coding MGP_NODShiLtJ_T0027123.1 MGP_NODShiLtJ_G0017676.1 mouse_genomes_project 10 143467814 143470100 - MGP_NODShiLtJ_P0027123 Mbd6 protein_coding protein_coding MGP_NODShiLtJ_T0024704.1 MGP_NODShiLtJ_G0016989.1 mouse_genomes_project 10 34170338 34720730 + MGP_NODShiLtJ_P0024704 Trdn protein_coding protein_coding MGP_NODShiLtJ_T0009519.1 MGP_NODShiLtJ_G0007652.1 mouse_genomes_project 10 90074346 90074412 + Mir6913 miRNA miRNA MGP_NODShiLtJ_T0026888.1 MGP_NODShiLtJ_G0017597.1 mouse_genomes_project 10 129808458 129834182 - MGP_NODShiLtJ_P0026888 Rab21 protein_coding protein_coding MGP_NODShiLtJ_T0026712.1 MGP_NODShiLtJ_G0017525.1 mouse_genomes_project 10 104167517 104188489 + MGP_NODShiLtJ_P0026712 Ndufa12 protein_coding protein_coding MGP_NODShiLtJ_T0026713.1 MGP_NODShiLtJ_G0017525.1 mouse_genomes_project 10 104167521 104171993 + Ndufa12 protein_coding retained_intron MGP_NODShiLtJ_T0026714.1 MGP_NODShiLtJ_G0017525.1 mouse_genomes_project 10 104168528 104188411 + MGP_NODShiLtJ_P0026714 Ndufa12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026715.1 MGP_NODShiLtJ_G0017526.1 mouse_genomes_project 10 104268179 104273189 - MGP_NODShiLtJ_P0026715 protein_coding protein_coding MGP_NODShiLtJ_T0026716.1 MGP_NODShiLtJ_G0017526.1 mouse_genomes_project 10 104271507 104273093 - protein_coding retained_intron MGP_NODShiLtJ_T0026225.1 MGP_NODShiLtJ_G0017408.1 mouse_genomes_project 10 89950432 89955507 + MGP_NODShiLtJ_P0026225 Apba3 protein_coding protein_coding MGP_NODShiLtJ_T0011179.1 MGP_NODShiLtJ_G0009312.1 mouse_genomes_project 10 140167031 140167290 + Gm23777 misc_RNA misc_RNA MGP_NODShiLtJ_T0024940.1 MGP_NODShiLtJ_G0017067.1 mouse_genomes_project 10 48096416 48250583 + MGP_NODShiLtJ_P0024940 Popdc3 protein_coding protein_coding MGP_NODShiLtJ_T0024941.1 MGP_NODShiLtJ_G0017067.1 mouse_genomes_project 10 48222884 48253921 + MGP_NODShiLtJ_P0024941 Popdc3 protein_coding protein_coding MGP_NODShiLtJ_T0024942.1 MGP_NODShiLtJ_G0017067.1 mouse_genomes_project 10 48222981 48253586 + MGP_NODShiLtJ_P0024942 Popdc3 protein_coding protein_coding MGP_NODShiLtJ_T0002978.1 MGP_NODShiLtJ_G0002782.1 mouse_genomes_project 10 42808658 42810254 - Cdk19os antisense antisense MGP_NODShiLtJ_T0002979.1 MGP_NODShiLtJ_G0002782.1 mouse_genomes_project 10 42809242 42810254 - Cdk19os antisense antisense MGP_NODShiLtJ_T0025319.1 MGP_NODShiLtJ_G0017178.1 mouse_genomes_project 10 70361577 70364146 - MGP_NODShiLtJ_P0025319 Gm10118 protein_coding protein_coding MGP_NODShiLtJ_T0024970.1 MGP_NODShiLtJ_G0017078.1 mouse_genomes_project 10 56599724 56651063 + Rfx6 protein_coding retained_intron MGP_NODShiLtJ_T0024971.1 MGP_NODShiLtJ_G0017078.1 mouse_genomes_project 10 56599724 56659753 + MGP_NODShiLtJ_P0024971 Rfx6 protein_coding protein_coding MGP_NODShiLtJ_T0024972.1 MGP_NODShiLtJ_G0017078.1 mouse_genomes_project 10 56608307 56659753 + MGP_NODShiLtJ_P0024972 Rfx6 protein_coding protein_coding MGP_NODShiLtJ_T0024974.1 MGP_NODShiLtJ_G0017080.1 mouse_genomes_project 10 56972926 56978888 + MGP_NODShiLtJ_P0024974 Vgll2 protein_coding protein_coding MGP_NODShiLtJ_T0024975.1 MGP_NODShiLtJ_G0017080.1 mouse_genomes_project 10 56972952 56978760 + MGP_NODShiLtJ_P0024975 Vgll2 protein_coding protein_coding MGP_NODShiLtJ_T0026202.1 MGP_NODShiLtJ_G0017404.1 mouse_genomes_project 10 89880857 89910558 - MGP_NODShiLtJ_P0026202 Atcay protein_coding protein_coding MGP_NODShiLtJ_T0026203.1 MGP_NODShiLtJ_G0017404.1 mouse_genomes_project 10 89880857 89910510 - MGP_NODShiLtJ_P0026203 Atcay protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026204.1 MGP_NODShiLtJ_G0017404.1 mouse_genomes_project 10 89886157 89891307 - Atcay protein_coding retained_intron MGP_NODShiLtJ_T0026255.1 MGP_NODShiLtJ_G0017416.1 mouse_genomes_project 10 90049375 90051162 - MGP_NODShiLtJ_P0026255 4930404N11Rik protein_coding protein_coding MGP_NODShiLtJ_T0026256.1 MGP_NODShiLtJ_G0017416.1 mouse_genomes_project 10 90050231 90051184 - 4930404N11Rik protein_coding retained_intron MGP_NODShiLtJ_T0026257.1 MGP_NODShiLtJ_G0017416.1 mouse_genomes_project 10 90050332 90052124 - MGP_NODShiLtJ_P0026257 4930404N11Rik protein_coding protein_coding MGP_NODShiLtJ_T0026258.1 MGP_NODShiLtJ_G0017416.1 mouse_genomes_project 10 90050355 90052098 - 4930404N11Rik protein_coding retained_intron MGP_NODShiLtJ_T0024286.1 MGP_NODShiLtJ_G0016859.1 mouse_genomes_project 10 4849826 4856631 - MGP_NODShiLtJ_P0024286 protein_coding protein_coding MGP_NODShiLtJ_T0026025.1 MGP_NODShiLtJ_G0017352.1 mouse_genomes_project 10 88829045 88831907 - MGP_NODShiLtJ_P0026025 Gamt protein_coding protein_coding MGP_NODShiLtJ_T0026026.1 MGP_NODShiLtJ_G0017352.1 mouse_genomes_project 10 88829058 88831863 - MGP_NODShiLtJ_P0026026 Gamt protein_coding protein_coding MGP_NODShiLtJ_T0026027.1 MGP_NODShiLtJ_G0017352.1 mouse_genomes_project 10 88829471 88831813 - Gamt protein_coding retained_intron MGP_NODShiLtJ_T0026028.1 MGP_NODShiLtJ_G0017352.1 mouse_genomes_project 10 88829687 88830184 - Gamt protein_coding retained_intron MGP_NODShiLtJ_T0026557.1 MGP_NODShiLtJ_G0017493.1 mouse_genomes_project 10 98135458 98143700 - MGP_NODShiLtJ_P0026557 Spic protein_coding protein_coding MGP_NODShiLtJ_T0026558.1 MGP_NODShiLtJ_G0017493.1 mouse_genomes_project 10 98135752 98143700 - MGP_NODShiLtJ_P0026558 Spic protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026559.1 MGP_NODShiLtJ_G0017493.1 mouse_genomes_project 10 98136375 98149912 - MGP_NODShiLtJ_P0026559 Spic protein_coding protein_coding MGP_NODShiLtJ_T0026560.1 MGP_NODShiLtJ_G0017493.1 mouse_genomes_project 10 98138516 98143700 - Spic protein_coding retained_intron MGP_NODShiLtJ_T0009547.1 MGP_NODShiLtJ_G0007680.1 mouse_genomes_project 10 142801860 142801970 - Mir378d miRNA miRNA MGP_NODShiLtJ_T0024887.1 MGP_NODShiLtJ_G0017050.1 mouse_genomes_project 10 45233262 45238816 - MGP_NODShiLtJ_P0024887 Nr2e1 protein_coding protein_coding MGP_NODShiLtJ_T0024888.1 MGP_NODShiLtJ_G0017050.1 mouse_genomes_project 10 45233354 45254486 - MGP_NODShiLtJ_P0024888 Nr2e1 protein_coding protein_coding MGP_NODShiLtJ_T0024889.1 MGP_NODShiLtJ_G0017050.1 mouse_genomes_project 10 45241471 45250330 - MGP_NODShiLtJ_P0024889 Nr2e1 protein_coding protein_coding MGP_NODShiLtJ_T0009528.1 MGP_NODShiLtJ_G0007661.1 mouse_genomes_project 10 103347492 103347548 + Mir7688 miRNA miRNA MGP_NODShiLtJ_T0012330.1 MGP_NODShiLtJ_G0010438.1 mouse_genomes_project 10 143494239 143497566 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026759.1 MGP_NODShiLtJ_G0017549.1 mouse_genomes_project 10 109782018 109783882 - MGP_NODShiLtJ_P0026759 Phxr2 protein_coding protein_coding MGP_NODShiLtJ_T0024983.1 MGP_NODShiLtJ_G0017083.1 mouse_genomes_project 10 57314527 57364766 - MGP_NODShiLtJ_P0024983 Gopc protein_coding protein_coding MGP_NODShiLtJ_T0024984.1 MGP_NODShiLtJ_G0017083.1 mouse_genomes_project 10 57314527 57364766 - MGP_NODShiLtJ_P0024984 Gopc protein_coding protein_coding MGP_NODShiLtJ_T0024985.1 MGP_NODShiLtJ_G0017083.1 mouse_genomes_project 10 57317226 57364540 - MGP_NODShiLtJ_P0024985 Gopc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012285.1 MGP_NODShiLtJ_G0010393.1 mouse_genomes_project 10 46128938 46129371 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099845.1 MGP_NODShiLtJ_G0038239.1 mouse_genomes_project 10 27676678 27676750 + Gm23353 snoRNA snoRNA MGP_NODShiLtJ_T0026580.1 MGP_NODShiLtJ_G0017501.1 mouse_genomes_project 10 99224519 99277873 - MGP_NODShiLtJ_P0026580 Scyl2 protein_coding protein_coding MGP_NODShiLtJ_T0026581.1 MGP_NODShiLtJ_G0017501.1 mouse_genomes_project 10 99225411 99241395 - Scyl2 protein_coding processed_transcript MGP_NODShiLtJ_T0026582.1 MGP_NODShiLtJ_G0017501.1 mouse_genomes_project 10 99225694 99277856 - MGP_NODShiLtJ_P0026582 Scyl2 protein_coding protein_coding MGP_NODShiLtJ_T0026583.1 MGP_NODShiLtJ_G0017501.1 mouse_genomes_project 10 99236675 99241099 - Scyl2 protein_coding retained_intron MGP_NODShiLtJ_T0026584.1 MGP_NODShiLtJ_G0017501.1 mouse_genomes_project 10 99237673 99249276 - MGP_NODShiLtJ_P0026584 Scyl2 protein_coding protein_coding MGP_NODShiLtJ_T0026585.1 MGP_NODShiLtJ_G0017501.1 mouse_genomes_project 10 99257603 99277856 - Scyl2 protein_coding retained_intron MGP_NODShiLtJ_T0026586.1 MGP_NODShiLtJ_G0017501.1 mouse_genomes_project 10 99266139 99277851 - Scyl2 protein_coding retained_intron MGP_NODShiLtJ_T0027062.1 MGP_NODShiLtJ_G0017655.1 mouse_genomes_project 10 141161330 141270171 - MGP_NODShiLtJ_P0027062 Slc16a7 protein_coding protein_coding MGP_NODShiLtJ_T0027063.1 MGP_NODShiLtJ_G0017655.1 mouse_genomes_project 10 141162360 141248294 - MGP_NODShiLtJ_P0027063 Slc16a7 protein_coding protein_coding MGP_NODShiLtJ_T0099855.1 MGP_NODShiLtJ_G0038249.1 mouse_genomes_project 10 48200945 48201074 - Gm26016 snoRNA snoRNA MGP_NODShiLtJ_T0006020.1 MGP_NODShiLtJ_G0005034.1 mouse_genomes_project 10 21151281 21154421 + Gm29323 lincRNA lincRNA MGP_NODShiLtJ_T0003020.1 MGP_NODShiLtJ_G0002816.1 mouse_genomes_project 10 92071732 92074621 - 1700025N21Rik antisense antisense MGP_NODShiLtJ_T0012295.1 MGP_NODShiLtJ_G0010403.1 mouse_genomes_project 10 67476993 67477440 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024215.1 MGP_NODShiLtJ_G0016847.1 mouse_genomes_project 10 1464924 1560617 + MGP_NODShiLtJ_P0024215 Ccdc170 protein_coding protein_coding MGP_NODShiLtJ_T0024216.1 MGP_NODShiLtJ_G0016847.1 mouse_genomes_project 10 1503060 1560617 + MGP_NODShiLtJ_P0024216 Ccdc170 protein_coding protein_coding MGP_NODShiLtJ_T0024217.1 MGP_NODShiLtJ_G0016847.1 mouse_genomes_project 10 1504720 1507486 + MGP_NODShiLtJ_P0024217 Ccdc170 protein_coding protein_coding MGP_NODShiLtJ_T0024218.1 MGP_NODShiLtJ_G0016847.1 mouse_genomes_project 10 1531398 1540038 + Ccdc170 protein_coding processed_transcript MGP_NODShiLtJ_T0024502.1 MGP_NODShiLtJ_G0016915.1 mouse_genomes_project 10 19080002 19083545 - MGP_NODShiLtJ_P0024502 Slc35d3 protein_coding protein_coding MGP_NODShiLtJ_T0027320.1 MGP_NODShiLtJ_G0017738.1 mouse_genomes_project 10 145071195 145093131 - MGP_NODShiLtJ_P0027320 Rab5b protein_coding protein_coding MGP_NODShiLtJ_T0027136.1 MGP_NODShiLtJ_G0017682.1 mouse_genomes_project 10 143556611 143573182 - MGP_NODShiLtJ_P0027136 Inhbc protein_coding protein_coding MGP_NODShiLtJ_T0026666.1 MGP_NODShiLtJ_G0017513.1 mouse_genomes_project 10 103368915 103404447 + MGP_NODShiLtJ_P0026666 Lta4h protein_coding protein_coding MGP_NODShiLtJ_T0024986.1 MGP_NODShiLtJ_G0017084.1 mouse_genomes_project 10 57337712 57337799 + MGP_NODShiLtJ_P0024986 Gm26741 protein_coding protein_coding MGP_NODShiLtJ_T0098621.1 MGP_NODShiLtJ_G0037015.1 mouse_genomes_project 10 55998189 55998296 + Gm26257 snRNA snRNA MGP_NODShiLtJ_T0026642.1 MGP_NODShiLtJ_G0017508.1 mouse_genomes_project 10 100897699 100921640 - MGP_NODShiLtJ_P0026642 Tmpo protein_coding protein_coding MGP_NODShiLtJ_T0026643.1 MGP_NODShiLtJ_G0017508.1 mouse_genomes_project 10 100897699 100921640 - MGP_NODShiLtJ_P0026643 Tmpo protein_coding protein_coding MGP_NODShiLtJ_T0026644.1 MGP_NODShiLtJ_G0017508.1 mouse_genomes_project 10 100897699 100921640 - MGP_NODShiLtJ_P0026644 Tmpo protein_coding protein_coding MGP_NODShiLtJ_T0026645.1 MGP_NODShiLtJ_G0017508.1 mouse_genomes_project 10 100897699 100921640 - MGP_NODShiLtJ_P0026645 Tmpo protein_coding protein_coding MGP_NODShiLtJ_T0026646.1 MGP_NODShiLtJ_G0017508.1 mouse_genomes_project 10 100910549 100921640 - MGP_NODShiLtJ_P0026646 Tmpo protein_coding protein_coding MGP_NODShiLtJ_T0026367.1 MGP_NODShiLtJ_G0017439.1 mouse_genomes_project 10 91287250 91291788 - MGP_NODShiLtJ_P0026367 Gm1553 protein_coding protein_coding MGP_NODShiLtJ_T0025727.1 MGP_NODShiLtJ_G0017271.1 mouse_genomes_project 10 86079177 86140264 + MGP_NODShiLtJ_P0025727 Tspear protein_coding protein_coding MGP_NODShiLtJ_T0025728.1 MGP_NODShiLtJ_G0017271.1 mouse_genomes_project 10 86079242 86145491 + MGP_NODShiLtJ_P0025728 Tspear protein_coding protein_coding MGP_NODShiLtJ_T0025729.1 MGP_NODShiLtJ_G0017271.1 mouse_genomes_project 10 86122891 86126311 + Tspear protein_coding retained_intron MGP_NODShiLtJ_T0003059.1 MGP_NODShiLtJ_G0002844.1 mouse_genomes_project 10 144894407 144897781 + Gm29585 antisense antisense MGP_NODShiLtJ_T0003060.1 MGP_NODShiLtJ_G0002844.1 mouse_genomes_project 10 144896715 144897802 + Gm29585 antisense antisense MGP_NODShiLtJ_T0003061.1 MGP_NODShiLtJ_G0002844.1 mouse_genomes_project 10 144897472 144920390 + Gm29585 antisense antisense MGP_NODShiLtJ_T0006027.1 MGP_NODShiLtJ_G0005041.1 mouse_genomes_project 10 42281905 42292071 + 4930547M16Rik lincRNA lincRNA MGP_NODShiLtJ_T0024507.1 MGP_NODShiLtJ_G0016917.1 mouse_genomes_project 10 19180822 19400956 + MGP_NODShiLtJ_P0024507 Map3k5 protein_coding protein_coding MGP_NODShiLtJ_T0024508.1 MGP_NODShiLtJ_G0016917.1 mouse_genomes_project 10 19180876 19399859 + MGP_NODShiLtJ_P0024508 Map3k5 protein_coding protein_coding MGP_NODShiLtJ_T0024509.1 MGP_NODShiLtJ_G0016917.1 mouse_genomes_project 10 19181572 19356570 + MGP_NODShiLtJ_P0024509 Map3k5 protein_coding protein_coding MGP_NODShiLtJ_T0024510.1 MGP_NODShiLtJ_G0016917.1 mouse_genomes_project 10 19197428 19272780 + MGP_NODShiLtJ_P0024510 Map3k5 protein_coding protein_coding MGP_NODShiLtJ_T0024511.1 MGP_NODShiLtJ_G0016917.1 mouse_genomes_project 10 19355936 19361834 + Map3k5 protein_coding processed_transcript MGP_NODShiLtJ_T0024512.1 MGP_NODShiLtJ_G0016917.1 mouse_genomes_project 10 19382475 19385353 + Map3k5 protein_coding retained_intron MGP_NODShiLtJ_T0024513.1 MGP_NODShiLtJ_G0016917.1 mouse_genomes_project 10 19385352 19396766 + Map3k5 protein_coding retained_intron MGP_NODShiLtJ_T0098623.1 MGP_NODShiLtJ_G0037017.1 mouse_genomes_project 10 59509987 59510094 - Gm26177 snRNA snRNA MGP_NODShiLtJ_T0026563.1 MGP_NODShiLtJ_G0017495.1 mouse_genomes_project 10 98219176 98300399 - MGP_NODShiLtJ_P0026563 Utp20 protein_coding protein_coding MGP_NODShiLtJ_T0024686.1 MGP_NODShiLtJ_G0016981.1 mouse_genomes_project 10 31291993 31302332 - MGP_NODShiLtJ_P0024686 Hint3 protein_coding protein_coding MGP_NODShiLtJ_T0024687.1 MGP_NODShiLtJ_G0016981.1 mouse_genomes_project 10 31292201 31302186 - MGP_NODShiLtJ_P0024687 Hint3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024688.1 MGP_NODShiLtJ_G0016981.1 mouse_genomes_project 10 31292235 31302190 - MGP_NODShiLtJ_P0024688 Hint3 protein_coding protein_coding MGP_NODShiLtJ_T0027376.1 MGP_NODShiLtJ_G0017772.1 mouse_genomes_project 10 145921169 145921991 + MGP_NODShiLtJ_P0027376 Olfr802 protein_coding protein_coding MGP_NODShiLtJ_T0027294.1 MGP_NODShiLtJ_G0017731.1 mouse_genomes_project 10 144916987 144922805 - MGP_NODShiLtJ_P0027294 Zc3h10 protein_coding protein_coding MGP_NODShiLtJ_T0027295.1 MGP_NODShiLtJ_G0017731.1 mouse_genomes_project 10 144919828 144922774 - Zc3h10 protein_coding processed_transcript MGP_NODShiLtJ_T0027296.1 MGP_NODShiLtJ_G0017731.1 mouse_genomes_project 10 144920110 144922670 - Zc3h10 protein_coding processed_transcript MGP_NODShiLtJ_T0027297.1 MGP_NODShiLtJ_G0017731.1 mouse_genomes_project 10 144920368 144922756 - Zc3h10 protein_coding processed_transcript MGP_NODShiLtJ_T0099840.1 MGP_NODShiLtJ_G0038234.1 mouse_genomes_project 10 21296804 21296913 - Gm23839 snoRNA snoRNA MGP_NODShiLtJ_T0024750.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450750 41465264 - MGP_NODShiLtJ_P0024750 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024751.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450754 41465258 - MGP_NODShiLtJ_P0024751 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024752.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450756 41455131 - MGP_NODShiLtJ_P0024752 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024753.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450756 41465206 - MGP_NODShiLtJ_P0024753 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024754.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450764 41465258 - MGP_NODShiLtJ_P0024754 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024755.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450765 41465258 - MGP_NODShiLtJ_P0024755 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024756.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450766 41454343 - MGP_NODShiLtJ_P0024756 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024757.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450770 41465272 - MGP_NODShiLtJ_P0024757 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024758.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41450814 41465258 - MGP_NODShiLtJ_P0024758 Fam229b protein_coding protein_coding MGP_NODShiLtJ_T0024759.1 MGP_NODShiLtJ_G0017012.1 mouse_genomes_project 10 41451565 41465215 - Fam229b protein_coding retained_intron MGP_NODShiLtJ_T0024632.1 MGP_NODShiLtJ_G0016962.1 mouse_genomes_project 10 25283685 25454009 + MGP_NODShiLtJ_P0024632 Epb41l2 protein_coding protein_coding MGP_NODShiLtJ_T0024633.1 MGP_NODShiLtJ_G0016962.1 mouse_genomes_project 10 25283699 25420801 + MGP_NODShiLtJ_P0024633 Epb41l2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024634.1 MGP_NODShiLtJ_G0016962.1 mouse_genomes_project 10 25335933 25454009 + MGP_NODShiLtJ_P0024634 Epb41l2 protein_coding protein_coding MGP_NODShiLtJ_T0024635.1 MGP_NODShiLtJ_G0016962.1 mouse_genomes_project 10 25422719 25454012 + MGP_NODShiLtJ_P0024635 Epb41l2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000812.1 MGP_NODShiLtJ_G0000742.1 mouse_genomes_project 10 128760194 128760509 + TEC TEC MGP_NODShiLtJ_T0025178.1 MGP_NODShiLtJ_G0017144.1 mouse_genomes_project 10 67850986 67880357 + MGP_NODShiLtJ_P0025178 Ppa1 protein_coding protein_coding MGP_NODShiLtJ_T0025179.1 MGP_NODShiLtJ_G0017144.1 mouse_genomes_project 10 67851055 67856320 + Ppa1 protein_coding retained_intron MGP_NODShiLtJ_T0025180.1 MGP_NODShiLtJ_G0017144.1 mouse_genomes_project 10 67868881 67871619 + Ppa1 protein_coding processed_transcript MGP_NODShiLtJ_T0025181.1 MGP_NODShiLtJ_G0017144.1 mouse_genomes_project 10 67869882 67871799 + Ppa1 protein_coding retained_intron MGP_NODShiLtJ_T0026742.1 MGP_NODShiLtJ_G0017537.1 mouse_genomes_project 10 106327131 106327443 + MGP_NODShiLtJ_P0026742 Gm5426 protein_coding protein_coding MGP_NODShiLtJ_T0000811.1 MGP_NODShiLtJ_G0000741.1 mouse_genomes_project 10 128293959 128294563 + TEC TEC MGP_NODShiLtJ_T0026468.1 MGP_NODShiLtJ_G0017470.1 mouse_genomes_project 10 95272065 95303844 + MGP_NODShiLtJ_P0026468 Fbxo7 protein_coding protein_coding MGP_NODShiLtJ_T0026469.1 MGP_NODShiLtJ_G0017470.1 mouse_genomes_project 10 95272121 95298567 + MGP_NODShiLtJ_P0026469 Fbxo7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026470.1 MGP_NODShiLtJ_G0017470.1 mouse_genomes_project 10 95272153 95279259 + MGP_NODShiLtJ_P0026470 Fbxo7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026471.1 MGP_NODShiLtJ_G0017470.1 mouse_genomes_project 10 95272323 95298597 + MGP_NODShiLtJ_P0026471 Fbxo7 protein_coding protein_coding MGP_NODShiLtJ_T0026472.1 MGP_NODShiLtJ_G0017470.1 mouse_genomes_project 10 95283105 95302145 + Fbxo7 protein_coding processed_transcript MGP_NODShiLtJ_T0026473.1 MGP_NODShiLtJ_G0017470.1 mouse_genomes_project 10 95292725 95297083 + Fbxo7 protein_coding retained_intron MGP_NODShiLtJ_T0003001.1 MGP_NODShiLtJ_G0002801.1 mouse_genomes_project 10 84163611 84165361 + Gm16222 antisense antisense MGP_NODShiLtJ_T0027261.1 MGP_NODShiLtJ_G0017715.1 mouse_genomes_project 10 144578977 144580748 + MGP_NODShiLtJ_P0027261 Apon protein_coding protein_coding MGP_NODShiLtJ_T0003055.1 MGP_NODShiLtJ_G0002840.1 mouse_genomes_project 10 143822201 143823859 + Gm16217 antisense antisense MGP_NODShiLtJ_T0003033.1 MGP_NODShiLtJ_G0002826.1 mouse_genomes_project 10 104558574 104605430 - Tmcc3os antisense antisense MGP_NODShiLtJ_T0026147.1 MGP_NODShiLtJ_G0017385.1 mouse_genomes_project 10 89499806 89502192 - MGP_NODShiLtJ_P0026147 Gm10146 protein_coding protein_coding MGP_NODShiLtJ_T0027206.1 MGP_NODShiLtJ_G0017703.1 mouse_genomes_project 10 144156244 144169488 + MGP_NODShiLtJ_P0027206 Sdr9c7 protein_coding protein_coding MGP_NODShiLtJ_T0027207.1 MGP_NODShiLtJ_G0017703.1 mouse_genomes_project 10 144156501 144169477 + Sdr9c7 protein_coding processed_transcript MGP_NODShiLtJ_T0027208.1 MGP_NODShiLtJ_G0017703.1 mouse_genomes_project 10 144159772 144168113 + Sdr9c7 protein_coding processed_transcript MGP_NODShiLtJ_T0027209.1 MGP_NODShiLtJ_G0017703.1 mouse_genomes_project 10 144161140 144168064 + Sdr9c7 protein_coding processed_transcript MGP_NODShiLtJ_T0009498.1 MGP_NODShiLtJ_G0007631.1 mouse_genomes_project 10 67255096 67255195 - Gm44308 miRNA miRNA MGP_NODShiLtJ_T0027390.1 MGP_NODShiLtJ_G0017784.1 mouse_genomes_project 10 146186148 146187084 + MGP_NODShiLtJ_P0027390 Olfr800 protein_coding protein_coding MGP_NODShiLtJ_T0027180.1 MGP_NODShiLtJ_G0017690.1 mouse_genomes_project 10 143888779 143894576 - MGP_NODShiLtJ_P0027180 Nab2 protein_coding protein_coding MGP_NODShiLtJ_T0027181.1 MGP_NODShiLtJ_G0017690.1 mouse_genomes_project 10 143888780 143894498 - MGP_NODShiLtJ_P0027181 Nab2 protein_coding protein_coding MGP_NODShiLtJ_T0027182.1 MGP_NODShiLtJ_G0017690.1 mouse_genomes_project 10 143892790 143893347 - MGP_NODShiLtJ_P0027182 Nab2 protein_coding protein_coding MGP_NODShiLtJ_T0027183.1 MGP_NODShiLtJ_G0017690.1 mouse_genomes_project 10 143892849 143896430 - MGP_NODShiLtJ_P0027183 Nab2 protein_coding protein_coding MGP_NODShiLtJ_T0026944.1 MGP_NODShiLtJ_G0017619.1 mouse_genomes_project 10 132053454 132060195 - MGP_NODShiLtJ_P0026944 Lyz2 protein_coding protein_coding MGP_NODShiLtJ_T0006047.1 MGP_NODShiLtJ_G0005057.1 mouse_genomes_project 10 80901469 81032816 - Gm15398 lincRNA lincRNA MGP_NODShiLtJ_T0002967.1 MGP_NODShiLtJ_G0002775.1 mouse_genomes_project 10 16873329 16878132 - Gm20655 antisense antisense MGP_NODShiLtJ_T0002968.1 MGP_NODShiLtJ_G0002775.1 mouse_genomes_project 10 16875913 16883878 - Gm20655 antisense antisense MGP_NODShiLtJ_T0027064.1 MGP_NODShiLtJ_G0017656.1 mouse_genomes_project 10 141988271 142045591 + MGP_NODShiLtJ_P0027064 Lrig3 protein_coding protein_coding MGP_NODShiLtJ_T0027015.1 MGP_NODShiLtJ_G0017636.1 mouse_genomes_project 10 135369022 135373263 + MGP_NODShiLtJ_P0027015 Llph protein_coding protein_coding MGP_NODShiLtJ_T0098613.1 MGP_NODShiLtJ_G0037007.1 mouse_genomes_project 10 42116618 42116734 + Gm22105 snRNA snRNA MGP_NODShiLtJ_T0026546.1 MGP_NODShiLtJ_G0017491.1 mouse_genomes_project 10 97882359 97891596 + MGP_NODShiLtJ_P0026546 Sycp3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025246.1 MGP_NODShiLtJ_G0017160.1 mouse_genomes_project 10 68774997 68811793 - MGP_NODShiLtJ_P0025246 Srgn protein_coding protein_coding MGP_NODShiLtJ_T0025247.1 MGP_NODShiLtJ_G0017160.1 mouse_genomes_project 10 68776931 68790749 - MGP_NODShiLtJ_P0025247 Srgn protein_coding protein_coding MGP_NODShiLtJ_T0025248.1 MGP_NODShiLtJ_G0017160.1 mouse_genomes_project 10 68777187 68790932 - MGP_NODShiLtJ_P0025248 Srgn protein_coding protein_coding MGP_NODShiLtJ_T0025249.1 MGP_NODShiLtJ_G0017160.1 mouse_genomes_project 10 68780413 68811767 - MGP_NODShiLtJ_P0025249 Srgn protein_coding protein_coding MGP_NODShiLtJ_T0025250.1 MGP_NODShiLtJ_G0017160.1 mouse_genomes_project 10 68790669 68791091 - MGP_NODShiLtJ_P0025250 Srgn protein_coding protein_coding MGP_NODShiLtJ_T0025251.1 MGP_NODShiLtJ_G0017160.1 mouse_genomes_project 10 68790735 68811767 - Srgn protein_coding processed_transcript MGP_NODShiLtJ_T0027199.1 MGP_NODShiLtJ_G0017698.1 mouse_genomes_project 10 144019014 144029406 + MGP_NODShiLtJ_P0027199 protein_coding protein_coding MGP_NODShiLtJ_T0024590.1 MGP_NODShiLtJ_G0016943.1 mouse_genomes_project 10 23676576 23677608 + MGP_NODShiLtJ_P0024590 Taar3 protein_coding protein_coding MGP_NODShiLtJ_T0027269.1 MGP_NODShiLtJ_G0017721.1 mouse_genomes_project 10 144670756 144706901 + MGP_NODShiLtJ_P0027269 Cs protein_coding protein_coding MGP_NODShiLtJ_T0009520.1 MGP_NODShiLtJ_G0007653.1 mouse_genomes_project 10 90106700 90106758 - Mir1191b miRNA miRNA MGP_NODShiLtJ_T0025837.1 MGP_NODShiLtJ_G0017308.1 mouse_genomes_project 10 88118891 88126048 - MGP_NODShiLtJ_P0025837 C2cd4c protein_coding protein_coding MGP_NODShiLtJ_T0025838.1 MGP_NODShiLtJ_G0017308.1 mouse_genomes_project 10 88118891 88126041 - MGP_NODShiLtJ_P0025838 C2cd4c protein_coding protein_coding MGP_NODShiLtJ_T0024838.1 MGP_NODShiLtJ_G0017039.1 mouse_genomes_project 10 44064255 44089091 + MGP_NODShiLtJ_P0024838 Ppil6 protein_coding protein_coding MGP_NODShiLtJ_T0009530.1 MGP_NODShiLtJ_G0007663.1 mouse_genomes_project 10 104576883 104576946 - Mir7211 miRNA miRNA MGP_NODShiLtJ_T0024987.1 MGP_NODShiLtJ_G0017085.1 mouse_genomes_project 10 57372608 57385278 + MGP_NODShiLtJ_P0024987 Nepn protein_coding protein_coding MGP_NODShiLtJ_T0024988.1 MGP_NODShiLtJ_G0017085.1 mouse_genomes_project 10 57375216 57388929 + MGP_NODShiLtJ_P0024988 Nepn protein_coding protein_coding MGP_NODShiLtJ_T0026967.1 MGP_NODShiLtJ_G0017625.1 mouse_genomes_project 10 132620485 132667238 - MGP_NODShiLtJ_P0026967 Nup107 protein_coding protein_coding MGP_NODShiLtJ_T0026968.1 MGP_NODShiLtJ_G0017625.1 mouse_genomes_project 10 132620504 132667245 - MGP_NODShiLtJ_P0026968 Nup107 protein_coding protein_coding MGP_NODShiLtJ_T0025266.1 MGP_NODShiLtJ_G0017166.1 mouse_genomes_project 10 69121144 69223342 - MGP_NODShiLtJ_P0025266 Tet1 protein_coding protein_coding MGP_NODShiLtJ_T0025267.1 MGP_NODShiLtJ_G0017166.1 mouse_genomes_project 10 69121144 69203006 - MGP_NODShiLtJ_P0025267 Tet1 protein_coding protein_coding MGP_NODShiLtJ_T0025268.1 MGP_NODShiLtJ_G0017166.1 mouse_genomes_project 10 69129112 69131031 - MGP_NODShiLtJ_P0025268 Tet1 protein_coding protein_coding MGP_NODShiLtJ_T0025269.1 MGP_NODShiLtJ_G0017166.1 mouse_genomes_project 10 69129616 69131032 - MGP_NODShiLtJ_P0025269 Tet1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025270.1 MGP_NODShiLtJ_G0017166.1 mouse_genomes_project 10 69129838 69131030 - MGP_NODShiLtJ_P0025270 Tet1 protein_coding protein_coding MGP_NODShiLtJ_T0025271.1 MGP_NODShiLtJ_G0017166.1 mouse_genomes_project 10 69156649 69184174 - Tet1 protein_coding processed_transcript MGP_NODShiLtJ_T0027319.1 MGP_NODShiLtJ_G0017737.1 mouse_genomes_project 10 145063878 145067910 - MGP_NODShiLtJ_P0027319 Suox protein_coding protein_coding MGP_NODShiLtJ_T0099863.1 MGP_NODShiLtJ_G0038257.1 mouse_genomes_project 10 69261277 69261406 - Gm25862 snoRNA snoRNA MGP_NODShiLtJ_T0024808.1 MGP_NODShiLtJ_G0017031.1 mouse_genomes_project 10 43334008 43386198 - MGP_NODShiLtJ_P0024808 Cdc40 protein_coding protein_coding MGP_NODShiLtJ_T0025463.1 MGP_NODShiLtJ_G0017205.1 mouse_genomes_project 10 80256591 80277700 + MGP_NODShiLtJ_P0025463 Zwint protein_coding protein_coding MGP_NODShiLtJ_T0025464.1 MGP_NODShiLtJ_G0017205.1 mouse_genomes_project 10 80256641 80272529 + MGP_NODShiLtJ_P0025464 Zwint protein_coding protein_coding MGP_NODShiLtJ_T0025465.1 MGP_NODShiLtJ_G0017205.1 mouse_genomes_project 10 80256642 80271905 + MGP_NODShiLtJ_P0025465 Zwint protein_coding protein_coding MGP_NODShiLtJ_T0025466.1 MGP_NODShiLtJ_G0017205.1 mouse_genomes_project 10 80257189 80258345 + Zwint protein_coding retained_intron MGP_NODShiLtJ_T0025467.1 MGP_NODShiLtJ_G0017205.1 mouse_genomes_project 10 80257983 80259135 + Zwint protein_coding retained_intron MGP_NODShiLtJ_T0025468.1 MGP_NODShiLtJ_G0017205.1 mouse_genomes_project 10 80258337 80277060 + Zwint protein_coding processed_transcript MGP_NODShiLtJ_T0098605.1 MGP_NODShiLtJ_G0036999.1 mouse_genomes_project 10 11954590 11954697 - Gm22995 snRNA snRNA MGP_NODShiLtJ_T0025571.1 MGP_NODShiLtJ_G0017219.1 mouse_genomes_project 10 83669499 83676889 - MGP_NODShiLtJ_P0025571 Susd2 protein_coding protein_coding MGP_NODShiLtJ_T0025572.1 MGP_NODShiLtJ_G0017219.1 mouse_genomes_project 10 83669499 83676889 - MGP_NODShiLtJ_P0025572 Susd2 protein_coding protein_coding MGP_NODShiLtJ_T0009534.1 MGP_NODShiLtJ_G0007667.1 mouse_genomes_project 10 112848148 112848229 + Mir3059 miRNA miRNA MGP_NODShiLtJ_T0026265.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90072427 90076352 + MGP_NODShiLtJ_P0026265 Dohh protein_coding protein_coding MGP_NODShiLtJ_T0026266.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90072458 90075451 + MGP_NODShiLtJ_P0026266 Dohh protein_coding protein_coding MGP_NODShiLtJ_T0026267.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90072465 90079560 + MGP_NODShiLtJ_P0026267 Dohh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026268.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90072466 90074101 + Dohh protein_coding retained_intron MGP_NODShiLtJ_T0026269.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90072894 90073994 + MGP_NODShiLtJ_P0026269 Dohh protein_coding protein_coding MGP_NODShiLtJ_T0026270.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90073620 90075681 + MGP_NODShiLtJ_P0026270 Dohh protein_coding protein_coding MGP_NODShiLtJ_T0026271.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90075316 90078858 + MGP_NODShiLtJ_P0026271 Dohh protein_coding protein_coding MGP_NODShiLtJ_T0026272.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90077004 90079267 + Dohh protein_coding processed_transcript MGP_NODShiLtJ_T0026273.1 MGP_NODShiLtJ_G0017418.1 mouse_genomes_project 10 90078328 90079135 + Dohh protein_coding retained_intron MGP_NODShiLtJ_T0025023.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63461724 63579158 + MGP_NODShiLtJ_P0025023 Pkib protein_coding protein_coding MGP_NODShiLtJ_T0025024.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63461794 63581888 + MGP_NODShiLtJ_P0025024 Pkib protein_coding protein_coding MGP_NODShiLtJ_T0025025.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63461799 63548785 + Pkib protein_coding retained_intron MGP_NODShiLtJ_T0025026.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63461837 63488486 + Pkib protein_coding retained_intron MGP_NODShiLtJ_T0025027.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63461867 63568395 + MGP_NODShiLtJ_P0025027 Pkib protein_coding protein_coding MGP_NODShiLtJ_T0025028.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63470703 63556232 + Pkib protein_coding processed_transcript MGP_NODShiLtJ_T0025029.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63477238 63576615 + MGP_NODShiLtJ_P0025029 Pkib protein_coding protein_coding MGP_NODShiLtJ_T0025030.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63477289 63576615 + MGP_NODShiLtJ_P0025030 Pkib protein_coding protein_coding MGP_NODShiLtJ_T0025031.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63484382 63577322 + MGP_NODShiLtJ_P0025031 Pkib protein_coding protein_coding MGP_NODShiLtJ_T0025032.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63484395 63576616 + MGP_NODShiLtJ_P0025032 Pkib protein_coding protein_coding MGP_NODShiLtJ_T0025033.1 MGP_NODShiLtJ_G0017101.1 mouse_genomes_project 10 63568225 63576686 + Pkib protein_coding processed_transcript MGP_NODShiLtJ_T0024794.1 MGP_NODShiLtJ_G0017023.1 mouse_genomes_project 10 42428646 42545799 - MGP_NODShiLtJ_P0024794 Slc16a10 protein_coding protein_coding MGP_NODShiLtJ_T0025192.1 MGP_NODShiLtJ_G0017149.1 mouse_genomes_project 10 68058492 68098634 - Col13a1 protein_coding processed_transcript MGP_NODShiLtJ_T0025193.1 MGP_NODShiLtJ_G0017149.1 mouse_genomes_project 10 68058492 68086657 - MGP_NODShiLtJ_P0025193 Col13a1 protein_coding protein_coding MGP_NODShiLtJ_T0025194.1 MGP_NODShiLtJ_G0017149.1 mouse_genomes_project 10 68058492 68204877 - MGP_NODShiLtJ_P0025194 Col13a1 protein_coding protein_coding MGP_NODShiLtJ_T0025195.1 MGP_NODShiLtJ_G0017149.1 mouse_genomes_project 10 68058492 68204842 - MGP_NODShiLtJ_P0025195 Col13a1 protein_coding protein_coding MGP_NODShiLtJ_T0025196.1 MGP_NODShiLtJ_G0017149.1 mouse_genomes_project 10 68058492 68204842 - MGP_NODShiLtJ_P0025196 Col13a1 protein_coding protein_coding MGP_NODShiLtJ_T0025197.1 MGP_NODShiLtJ_G0017149.1 mouse_genomes_project 10 68068983 68203890 - Col13a1 protein_coding retained_intron MGP_NODShiLtJ_T0025198.1 MGP_NODShiLtJ_G0017149.1 mouse_genomes_project 10 68069112 68071777 - Col13a1 protein_coding retained_intron MGP_NODShiLtJ_T0026588.1 MGP_NODShiLtJ_G0017503.1 mouse_genomes_project 10 99353044 99437255 + MGP_NODShiLtJ_P0026588 Uhrf1bp1l protein_coding protein_coding MGP_NODShiLtJ_T0012318.1 MGP_NODShiLtJ_G0010426.1 mouse_genomes_project 10 111092374 111093059 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025641.1 MGP_NODShiLtJ_G0017246.1 mouse_genomes_project 10 84700262 84718368 + MGP_NODShiLtJ_P0025641 Ftcd protein_coding protein_coding MGP_NODShiLtJ_T0025642.1 MGP_NODShiLtJ_G0017246.1 mouse_genomes_project 10 84700266 84719145 + Ftcd protein_coding retained_intron MGP_NODShiLtJ_T0025643.1 MGP_NODShiLtJ_G0017246.1 mouse_genomes_project 10 84700320 84718119 + MGP_NODShiLtJ_P0025643 Ftcd protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025644.1 MGP_NODShiLtJ_G0017246.1 mouse_genomes_project 10 84715939 84717375 + Ftcd protein_coding processed_transcript MGP_NODShiLtJ_T0101528.1 MGP_NODShiLtJ_G0039698.1 mouse_genomes_project 10 117659274 117659433 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0016997.1 MGP_NODShiLtJ_G0015005.1 mouse_genomes_project 10 44145001 44154854 + 5730435O14Rik processed_transcript antisense MGP_NODShiLtJ_T0016998.1 MGP_NODShiLtJ_G0015005.1 mouse_genomes_project 10 44153941 44154843 + 5730435O14Rik processed_transcript retained_intron MGP_NODShiLtJ_T0024529.1 MGP_NODShiLtJ_G0016921.1 mouse_genomes_project 10 19626623 19643155 + MGP_NODShiLtJ_P0024529 Mtfr2 protein_coding protein_coding MGP_NODShiLtJ_T0026198.1 MGP_NODShiLtJ_G0017400.1 mouse_genomes_project 10 89851656 89859105 + MGP_NODShiLtJ_P0026198 Eef2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024623.1 MGP_NODShiLtJ_G0016960.1 mouse_genomes_project 10 24799815 24812350 - MGP_NODShiLtJ_P0024623 Arg1 protein_coding protein_coding MGP_NODShiLtJ_T0026150.1 MGP_NODShiLtJ_G0017388.1 mouse_genomes_project 10 89547441 89548961 - MGP_NODShiLtJ_P0026150 Timm13 protein_coding protein_coding MGP_NODShiLtJ_T0026744.1 MGP_NODShiLtJ_G0017539.1 mouse_genomes_project 10 107831335 107871994 + MGP_NODShiLtJ_P0026744 Dcn protein_coding protein_coding MGP_NODShiLtJ_T0026745.1 MGP_NODShiLtJ_G0017539.1 mouse_genomes_project 10 107834185 107871994 + MGP_NODShiLtJ_P0026745 Dcn protein_coding protein_coding MGP_NODShiLtJ_T0025690.1 MGP_NODShiLtJ_G0017256.1 mouse_genomes_project 10 85687108 85719693 - MGP_NODShiLtJ_P0025690 Fam207a protein_coding protein_coding MGP_NODShiLtJ_T0011168.1 MGP_NODShiLtJ_G0009301.1 mouse_genomes_project 10 101882805 101882967 - Gm27608 misc_RNA misc_RNA MGP_NODShiLtJ_T0097740.1 MGP_NODShiLtJ_G0036152.1 mouse_genomes_project 10 83618884 83619396 - pseudogene pseudogene MGP_NODShiLtJ_T0026758.1 MGP_NODShiLtJ_G0017548.1 mouse_genomes_project 10 109763929 109769018 + MGP_NODShiLtJ_P0026758 Galnt4 protein_coding protein_coding MGP_NODShiLtJ_T0009511.1 MGP_NODShiLtJ_G0007644.1 mouse_genomes_project 10 88391876 88391942 + Mir6910 miRNA miRNA MGP_NODShiLtJ_T0101524.1 MGP_NODShiLtJ_G0039694.1 mouse_genomes_project 10 23730055 23746599 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0025214.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68533855 68611147 - MGP_NODShiLtJ_P0025214 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025215.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68534104 68653939 - MGP_NODShiLtJ_P0025215 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025216.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68534108 68632302 - MGP_NODShiLtJ_P0025216 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025217.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68534909 68613327 - MGP_NODShiLtJ_P0025217 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025218.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68550427 68556834 - Hk1 protein_coding retained_intron MGP_NODShiLtJ_T0025219.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68562364 68588808 - MGP_NODShiLtJ_P0025219 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025220.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68562597 68598420 - MGP_NODShiLtJ_P0025220 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025221.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68564763 68613304 - MGP_NODShiLtJ_P0025221 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025222.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68565008 68613313 - Hk1 protein_coding retained_intron MGP_NODShiLtJ_T0025223.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68653883 - MGP_NODShiLtJ_P0025223 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025224.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68649131 - MGP_NODShiLtJ_P0025224 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025225.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68653883 - MGP_NODShiLtJ_P0025225 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025226.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68649131 - MGP_NODShiLtJ_P0025226 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025227.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68649131 - MGP_NODShiLtJ_P0025227 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025228.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68649131 - MGP_NODShiLtJ_P0025228 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025229.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68649131 - MGP_NODShiLtJ_P0025229 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025230.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68649131 - MGP_NODShiLtJ_P0025230 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025231.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68653883 - MGP_NODShiLtJ_P0025231 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025232.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585890 68649131 - MGP_NODShiLtJ_P0025232 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0025233.1 MGP_NODShiLtJ_G0017155.1 mouse_genomes_project 10 68585935 68636214 - MGP_NODShiLtJ_P0025233 Hk1 protein_coding protein_coding MGP_NODShiLtJ_T0024402.1 MGP_NODShiLtJ_G0016885.1 mouse_genomes_project 10 11138455 11167974 - MGP_NODShiLtJ_P0024402 Zc2hc1b protein_coding protein_coding MGP_NODShiLtJ_T0024359.1 MGP_NODShiLtJ_G0016878.1 mouse_genomes_project 10 8946428 8987538 + MGP_NODShiLtJ_P0024359 Shprh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024360.1 MGP_NODShiLtJ_G0016878.1 mouse_genomes_project 10 8946431 9033430 + MGP_NODShiLtJ_P0024360 Shprh protein_coding protein_coding MGP_NODShiLtJ_T0024361.1 MGP_NODShiLtJ_G0016878.1 mouse_genomes_project 10 8946474 8951526 + Shprh protein_coding retained_intron MGP_NODShiLtJ_T0024362.1 MGP_NODShiLtJ_G0016878.1 mouse_genomes_project 10 8946525 9025377 + MGP_NODShiLtJ_P0024362 Shprh protein_coding protein_coding MGP_NODShiLtJ_T0024363.1 MGP_NODShiLtJ_G0016878.1 mouse_genomes_project 10 8946525 9025377 + MGP_NODShiLtJ_P0024363 Shprh protein_coding protein_coding MGP_NODShiLtJ_T0024364.1 MGP_NODShiLtJ_G0016878.1 mouse_genomes_project 10 8963742 8969461 + MGP_NODShiLtJ_P0024364 Shprh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024365.1 MGP_NODShiLtJ_G0016878.1 mouse_genomes_project 10 8965854 9030132 + Shprh protein_coding retained_intron MGP_NODShiLtJ_T0024366.1 MGP_NODShiLtJ_G0016878.1 mouse_genomes_project 10 9019669 9025436 + Shprh protein_coding retained_intron MGP_NODShiLtJ_T0000807.1 MGP_NODShiLtJ_G0000737.1 mouse_genomes_project 10 117517543 117518250 - TEC TEC MGP_NODShiLtJ_T0006044.1 MGP_NODShiLtJ_G0005054.1 mouse_genomes_project 10 73923551 73932494 - 1110002J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0027325.1 MGP_NODShiLtJ_G0017742.1 mouse_genomes_project 10 145153401 145175501 + MGP_NODShiLtJ_P0027325 Pym1 protein_coding protein_coding MGP_NODShiLtJ_T0027326.1 MGP_NODShiLtJ_G0017742.1 mouse_genomes_project 10 145153977 145175501 + MGP_NODShiLtJ_P0027326 Pym1 protein_coding protein_coding MGP_NODShiLtJ_T0027018.1 MGP_NODShiLtJ_G0017639.1 mouse_genomes_project 10 136000957 136128308 - MGP_NODShiLtJ_P0027018 Msrb3 protein_coding protein_coding MGP_NODShiLtJ_T0027019.1 MGP_NODShiLtJ_G0017639.1 mouse_genomes_project 10 136004406 136078813 - Msrb3 protein_coding processed_transcript MGP_NODShiLtJ_T0027020.1 MGP_NODShiLtJ_G0017639.1 mouse_genomes_project 10 136004548 136099805 - MGP_NODShiLtJ_P0027020 Msrb3 protein_coding protein_coding MGP_NODShiLtJ_T0025639.1 MGP_NODShiLtJ_G0017245.1 mouse_genomes_project 10 84684305 84693089 + MGP_NODShiLtJ_P0025639 Spatc1l protein_coding protein_coding MGP_NODShiLtJ_T0025640.1 MGP_NODShiLtJ_G0017245.1 mouse_genomes_project 10 84684342 84692918 + MGP_NODShiLtJ_P0025640 Spatc1l protein_coding protein_coding MGP_NODShiLtJ_T0003024.1 MGP_NODShiLtJ_G0002819.1 mouse_genomes_project 10 95369764 95373792 + Gm15990 antisense antisense MGP_NODShiLtJ_T0026740.1 MGP_NODShiLtJ_G0017536.1 mouse_genomes_project 10 106113648 106229579 + MGP_NODShiLtJ_P0026740 Eea1 protein_coding protein_coding MGP_NODShiLtJ_T0026741.1 MGP_NODShiLtJ_G0017536.1 mouse_genomes_project 10 106113934 106225014 + MGP_NODShiLtJ_P0026741 Eea1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097880.1 MGP_NODShiLtJ_G0036292.1 mouse_genomes_project 10 43970233 43970338 - Gm27783 rRNA rRNA MGP_NODShiLtJ_T0025953.1 MGP_NODShiLtJ_G0017341.1 mouse_genomes_project 10 88595107 88606237 + Gpx4 protein_coding processed_transcript MGP_NODShiLtJ_T0025954.1 MGP_NODShiLtJ_G0017341.1 mouse_genomes_project 10 88601338 88606237 + MGP_NODShiLtJ_P0025954 Gpx4 protein_coding protein_coding MGP_NODShiLtJ_T0025955.1 MGP_NODShiLtJ_G0017341.1 mouse_genomes_project 10 88601885 88604905 + Gpx4 protein_coding processed_transcript MGP_NODShiLtJ_T0025956.1 MGP_NODShiLtJ_G0017341.1 mouse_genomes_project 10 88601887 88606237 + MGP_NODShiLtJ_P0025956 Gpx4 protein_coding protein_coding MGP_NODShiLtJ_T0025957.1 MGP_NODShiLtJ_G0017341.1 mouse_genomes_project 10 88602315 88606192 + MGP_NODShiLtJ_P0025957 Gpx4 protein_coding protein_coding MGP_NODShiLtJ_T0025958.1 MGP_NODShiLtJ_G0017341.1 mouse_genomes_project 10 88605691 88606163 + Gpx4 protein_coding retained_intron MGP_NODShiLtJ_T0025959.1 MGP_NODShiLtJ_G0017341.1 mouse_genomes_project 10 88605795 88606161 + Gpx4 protein_coding retained_intron MGP_NODShiLtJ_T0026976.1 MGP_NODShiLtJ_G0017629.1 mouse_genomes_project 10 133412519 133417364 + MGP_NODShiLtJ_P0026976 Ifng protein_coding protein_coding MGP_NODShiLtJ_T0025645.1 MGP_NODShiLtJ_G0017247.1 mouse_genomes_project 10 84725092 84754799 - MGP_NODShiLtJ_P0025645 Col6a2 protein_coding protein_coding MGP_NODShiLtJ_T0025646.1 MGP_NODShiLtJ_G0017247.1 mouse_genomes_project 10 84727165 84754494 - MGP_NODShiLtJ_P0025646 Col6a2 protein_coding protein_coding MGP_NODShiLtJ_T0025647.1 MGP_NODShiLtJ_G0017247.1 mouse_genomes_project 10 84730341 84754494 - Col6a2 protein_coding retained_intron MGP_NODShiLtJ_T0027030.1 MGP_NODShiLtJ_G0017646.1 mouse_genomes_project 10 136964498 137006410 + MGP_NODShiLtJ_P0027030 D930020B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0027031.1 MGP_NODShiLtJ_G0017646.1 mouse_genomes_project 10 136964611 137027299 + MGP_NODShiLtJ_P0027031 D930020B18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027032.1 MGP_NODShiLtJ_G0017646.1 mouse_genomes_project 10 136964704 137027028 + MGP_NODShiLtJ_P0027032 D930020B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0027033.1 MGP_NODShiLtJ_G0017646.1 mouse_genomes_project 10 136964782 137027028 + MGP_NODShiLtJ_P0027033 D930020B18Rik protein_coding protein_coding MGP_NODShiLtJ_T0024760.1 MGP_NODShiLtJ_G0017013.1 mouse_genomes_project 10 41465380 41483757 + MGP_NODShiLtJ_P0024760 Tube1 protein_coding protein_coding MGP_NODShiLtJ_T0026814.1 MGP_NODShiLtJ_G0017567.1 mouse_genomes_project 10 118228719 118317181 - MGP_NODShiLtJ_P0026814 Mettl25 protein_coding protein_coding MGP_NODShiLtJ_T0026815.1 MGP_NODShiLtJ_G0017567.1 mouse_genomes_project 10 118228785 118317183 - MGP_NODShiLtJ_P0026815 Mettl25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026816.1 MGP_NODShiLtJ_G0017567.1 mouse_genomes_project 10 118300823 118317174 - MGP_NODShiLtJ_P0026816 Mettl25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026817.1 MGP_NODShiLtJ_G0017567.1 mouse_genomes_project 10 118315007 118317014 - Mettl25 protein_coding processed_transcript MGP_NODShiLtJ_T0027388.1 MGP_NODShiLtJ_G0017782.1 mouse_genomes_project 10 146137334 146143845 - MGP_NODShiLtJ_P0027388 Olfr798 protein_coding protein_coding MGP_NODShiLtJ_T0027049.1 MGP_NODShiLtJ_G0017651.1 mouse_genomes_project 10 138088165 138302496 + Ppm1h protein_coding retained_intron MGP_NODShiLtJ_T0027050.1 MGP_NODShiLtJ_G0017651.1 mouse_genomes_project 10 138088181 138346610 + MGP_NODShiLtJ_P0027050 Ppm1h protein_coding protein_coding MGP_NODShiLtJ_T0027051.1 MGP_NODShiLtJ_G0017651.1 mouse_genomes_project 10 138088185 138373192 + MGP_NODShiLtJ_P0027051 Ppm1h protein_coding protein_coding MGP_NODShiLtJ_T0027052.1 MGP_NODShiLtJ_G0017651.1 mouse_genomes_project 10 138168640 138237122 + Ppm1h protein_coding processed_transcript MGP_NODShiLtJ_T0027053.1 MGP_NODShiLtJ_G0017651.1 mouse_genomes_project 10 138236894 138242479 + Ppm1h protein_coding retained_intron MGP_NODShiLtJ_T0027054.1 MGP_NODShiLtJ_G0017651.1 mouse_genomes_project 10 138237052 138368665 + Ppm1h protein_coding retained_intron MGP_NODShiLtJ_T0027055.1 MGP_NODShiLtJ_G0017651.1 mouse_genomes_project 10 138237097 138308328 + Ppm1h protein_coding processed_transcript MGP_NODShiLtJ_T0027056.1 MGP_NODShiLtJ_G0017651.1 mouse_genomes_project 10 138317375 138368826 + MGP_NODShiLtJ_P0027056 Ppm1h protein_coding protein_coding MGP_NODShiLtJ_T0027355.1 MGP_NODShiLtJ_G0017758.1 mouse_genomes_project 10 145527960 145528899 - MGP_NODShiLtJ_P0027355 Olfr768 protein_coding protein_coding MGP_NODShiLtJ_T0026970.1 MGP_NODShiLtJ_G0017627.1 mouse_genomes_project 10 133074687 133103314 + MGP_NODShiLtJ_P0026970 Mdm1 protein_coding protein_coding MGP_NODShiLtJ_T0026971.1 MGP_NODShiLtJ_G0017627.1 mouse_genomes_project 10 133074687 133103314 + MGP_NODShiLtJ_P0026971 Mdm1 protein_coding protein_coding MGP_NODShiLtJ_T0026972.1 MGP_NODShiLtJ_G0017627.1 mouse_genomes_project 10 133074687 133103314 + MGP_NODShiLtJ_P0026972 Mdm1 protein_coding protein_coding MGP_NODShiLtJ_T0026973.1 MGP_NODShiLtJ_G0017627.1 mouse_genomes_project 10 133074687 133103314 + MGP_NODShiLtJ_P0026973 Mdm1 protein_coding protein_coding MGP_NODShiLtJ_T0011176.1 MGP_NODShiLtJ_G0009309.1 mouse_genomes_project 10 122328718 122328996 - Gm22097 misc_RNA misc_RNA MGP_NODShiLtJ_T0009526.1 MGP_NODShiLtJ_G0007659.1 mouse_genomes_project 10 101947136 101947220 - Mir1251 miRNA miRNA MGP_NODShiLtJ_T0027114.1 MGP_NODShiLtJ_G0017673.1 mouse_genomes_project 10 143369433 143383956 - MGP_NODShiLtJ_P0027114 Pip4k2c protein_coding protein_coding MGP_NODShiLtJ_T0026065.1 MGP_NODShiLtJ_G0017361.1 mouse_genomes_project 10 88976834 88984239 - MGP_NODShiLtJ_P0026065 Mex3d protein_coding protein_coding MGP_NODShiLtJ_T0026066.1 MGP_NODShiLtJ_G0017361.1 mouse_genomes_project 10 88976836 88984241 - MGP_NODShiLtJ_P0026066 Mex3d protein_coding protein_coding MGP_NODShiLtJ_T0026067.1 MGP_NODShiLtJ_G0017361.1 mouse_genomes_project 10 88976933 88984028 - MGP_NODShiLtJ_P0026067 Mex3d protein_coding protein_coding MGP_NODShiLtJ_T0024944.1 MGP_NODShiLtJ_G0017069.1 mouse_genomes_project 10 48316116 48441595 - MGP_NODShiLtJ_P0024944 Lin28b protein_coding protein_coding MGP_NODShiLtJ_T0025839.1 MGP_NODShiLtJ_G0017309.1 mouse_genomes_project 10 88129924 88134598 - Shc2 protein_coding retained_intron MGP_NODShiLtJ_T0025840.1 MGP_NODShiLtJ_G0017309.1 mouse_genomes_project 10 88131964 88134954 - Shc2 protein_coding retained_intron MGP_NODShiLtJ_T0025841.1 MGP_NODShiLtJ_G0017309.1 mouse_genomes_project 10 88132932 88149722 - MGP_NODShiLtJ_P0025841 Shc2 protein_coding protein_coding MGP_NODShiLtJ_T0000813.1 MGP_NODShiLtJ_G0000743.1 mouse_genomes_project 10 132914325 132914675 + TEC TEC MGP_NODShiLtJ_T0009555.1 MGP_NODShiLtJ_G0007688.1 mouse_genomes_project 10 144824705 144824794 + Mir8105 miRNA miRNA MGP_NODShiLtJ_T0025718.1 MGP_NODShiLtJ_G0017262.1 mouse_genomes_project 10 85935995 85936328 + MGP_NODShiLtJ_P0025718 Gm10272 protein_coding protein_coding MGP_NODShiLtJ_T0098604.1 MGP_NODShiLtJ_G0036998.1 mouse_genomes_project 10 10757261 10757361 - Gm23044 snRNA snRNA MGP_NODShiLtJ_T0012265.1 MGP_NODShiLtJ_G0010373.1 mouse_genomes_project 10 8029756 8030969 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024649.1 MGP_NODShiLtJ_G0016969.1 mouse_genomes_project 10 27086979 27095426 - Lama2 protein_coding retained_intron MGP_NODShiLtJ_T0024650.1 MGP_NODShiLtJ_G0016969.1 mouse_genomes_project 10 27088228 27866922 - MGP_NODShiLtJ_P0024650 Lama2 protein_coding protein_coding MGP_NODShiLtJ_T0024651.1 MGP_NODShiLtJ_G0016969.1 mouse_genomes_project 10 27088438 27866875 - MGP_NODShiLtJ_P0024651 Lama2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024652.1 MGP_NODShiLtJ_G0016969.1 mouse_genomes_project 10 27368407 27866875 - MGP_NODShiLtJ_P0024652 Lama2 protein_coding protein_coding MGP_NODShiLtJ_T0024653.1 MGP_NODShiLtJ_G0016969.1 mouse_genomes_project 10 27443290 27867021 - Lama2 protein_coding retained_intron MGP_NODShiLtJ_T0024654.1 MGP_NODShiLtJ_G0016969.1 mouse_genomes_project 10 27562068 27866945 - Lama2 protein_coding retained_intron MGP_NODShiLtJ_T0024655.1 MGP_NODShiLtJ_G0016969.1 mouse_genomes_project 10 27644884 27869837 - Lama2 protein_coding retained_intron MGP_NODShiLtJ_T0024656.1 MGP_NODShiLtJ_G0016969.1 mouse_genomes_project 10 27699007 27866945 - Lama2 protein_coding processed_transcript MGP_NODShiLtJ_T0009545.1 MGP_NODShiLtJ_G0007678.1 mouse_genomes_project 10 138653438 138653534 - Gm27920 miRNA miRNA MGP_NODShiLtJ_T0098249.1 MGP_NODShiLtJ_G0036660.1 mouse_genomes_project 10 89212293 89214122 - Gm29093 sense_intronic sense_intronic MGP_NODShiLtJ_T0026829.1 MGP_NODShiLtJ_G0017573.1 mouse_genomes_project 10 120457291 120681849 - MGP_NODShiLtJ_P0026829 Ptprq protein_coding protein_coding MGP_NODShiLtJ_T0098616.1 MGP_NODShiLtJ_G0037010.1 mouse_genomes_project 10 47614880 47614995 + Gm22503 snRNA snRNA MGP_NODShiLtJ_T0011173.1 MGP_NODShiLtJ_G0009306.1 mouse_genomes_project 10 101944559 101944668 - Gm27419 misc_RNA misc_RNA MGP_NODShiLtJ_T0098600.1 MGP_NODShiLtJ_G0036994.1 mouse_genomes_project 10 2446989 2447097 + Gm23573 snRNA snRNA MGP_NODShiLtJ_T0027285.1 MGP_NODShiLtJ_G0017726.1 mouse_genomes_project 10 144774999 144805175 + MGP_NODShiLtJ_P0027285 Rnf41 protein_coding protein_coding MGP_NODShiLtJ_T0027286.1 MGP_NODShiLtJ_G0017726.1 mouse_genomes_project 10 144774999 144805175 + MGP_NODShiLtJ_P0027286 Rnf41 protein_coding protein_coding MGP_NODShiLtJ_T0027026.1 MGP_NODShiLtJ_G0017642.1 mouse_genomes_project 10 136526012 136579967 - MGP_NODShiLtJ_P0027026 Tbc1d30 protein_coding protein_coding MGP_NODShiLtJ_T0011175.1 MGP_NODShiLtJ_G0009308.1 mouse_genomes_project 10 105696707 105697032 + Gm23776 misc_RNA misc_RNA MGP_NODShiLtJ_T0000798.1 MGP_NODShiLtJ_G0000729.1 mouse_genomes_project 10 80879630 80880023 - TEC TEC MGP_NODShiLtJ_T0024801.1 MGP_NODShiLtJ_G0017025.1 mouse_genomes_project 10 42676052 42684308 - MGP_NODShiLtJ_P0024801 Gtf3c6 protein_coding protein_coding MGP_NODShiLtJ_T0098629.1 MGP_NODShiLtJ_G0037023.1 mouse_genomes_project 10 73103323 73103429 - Gm22829 snRNA snRNA MGP_NODShiLtJ_T0097737.1 MGP_NODShiLtJ_G0036149.1 mouse_genomes_project 10 70464904 70465269 + pseudogene pseudogene MGP_NODShiLtJ_T0027419.1 MGP_NODShiLtJ_G0017807.1 mouse_genomes_project 10 147056451 147072507 - MGP_NODShiLtJ_P0027419 Neurod4 protein_coding protein_coding MGP_NODShiLtJ_T0026192.1 MGP_NODShiLtJ_G0017399.1 mouse_genomes_project 10 89817210 89833153 - MGP_NODShiLtJ_P0026192 Pias4 protein_coding protein_coding MGP_NODShiLtJ_T0026193.1 MGP_NODShiLtJ_G0017399.1 mouse_genomes_project 10 89818179 89820069 - Pias4 protein_coding retained_intron MGP_NODShiLtJ_T0026194.1 MGP_NODShiLtJ_G0017399.1 mouse_genomes_project 10 89819446 89821956 - Pias4 protein_coding retained_intron MGP_NODShiLtJ_T0026195.1 MGP_NODShiLtJ_G0017399.1 mouse_genomes_project 10 89819616 89832951 - MGP_NODShiLtJ_P0026195 Pias4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026196.1 MGP_NODShiLtJ_G0017399.1 mouse_genomes_project 10 89819803 89821204 - MGP_NODShiLtJ_P0026196 Pias4 protein_coding protein_coding MGP_NODShiLtJ_T0026197.1 MGP_NODShiLtJ_G0017399.1 mouse_genomes_project 10 89826943 89832944 - Pias4 protein_coding retained_intron MGP_NODShiLtJ_T0099864.1 MGP_NODShiLtJ_G0038258.1 mouse_genomes_project 10 73458259 73458389 + Gm22594 snoRNA snoRNA MGP_NODShiLtJ_T0099831.1 MGP_NODShiLtJ_G0038225.1 mouse_genomes_project 10 6356313 6356450 - Gm25410 snoRNA snoRNA MGP_NODShiLtJ_T0098147.1 MGP_NODShiLtJ_G0036559.1 mouse_genomes_project 10 45521532 45521837 - Gm26464 ribozyme ribozyme MGP_NODShiLtJ_T0024345.1 MGP_NODShiLtJ_G0016874.1 mouse_genomes_project 10 8019181 8170796 - MGP_NODShiLtJ_P0024345 protein_coding protein_coding MGP_NODShiLtJ_T0024346.1 MGP_NODShiLtJ_G0016874.1 mouse_genomes_project 10 8019187 8170784 - MGP_NODShiLtJ_P0024346 protein_coding protein_coding MGP_NODShiLtJ_T0024347.1 MGP_NODShiLtJ_G0016874.1 mouse_genomes_project 10 8019187 8106413 - MGP_NODShiLtJ_P0024347 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024348.1 MGP_NODShiLtJ_G0016874.1 mouse_genomes_project 10 8019416 8170772 - MGP_NODShiLtJ_P0024348 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024349.1 MGP_NODShiLtJ_G0016874.1 mouse_genomes_project 10 8092493 8128239 - MGP_NODShiLtJ_P0024349 protein_coding protein_coding MGP_NODShiLtJ_T0024350.1 MGP_NODShiLtJ_G0016874.1 mouse_genomes_project 10 8093151 8170784 - MGP_NODShiLtJ_P0024350 protein_coding protein_coding MGP_NODShiLtJ_T0026788.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 112745858 113815237 + MGP_NODShiLtJ_P0026788 Mgat4c protein_coding protein_coding MGP_NODShiLtJ_T0026789.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 112746012 113792354 + Mgat4c protein_coding processed_transcript MGP_NODShiLtJ_T0026790.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 112746012 113800069 + MGP_NODShiLtJ_P0026790 Mgat4c protein_coding protein_coding MGP_NODShiLtJ_T0026791.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 112746117 113807291 + MGP_NODShiLtJ_P0026791 Mgat4c protein_coding protein_coding MGP_NODShiLtJ_T0026792.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 113468172 113810579 + MGP_NODShiLtJ_P0026792 Mgat4c protein_coding protein_coding MGP_NODShiLtJ_T0026793.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 113468172 113815240 + MGP_NODShiLtJ_P0026793 Mgat4c protein_coding protein_coding MGP_NODShiLtJ_T0026794.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 113468192 113614174 + Mgat4c protein_coding processed_transcript MGP_NODShiLtJ_T0026795.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 113468203 113799996 + MGP_NODShiLtJ_P0026795 Mgat4c protein_coding protein_coding MGP_NODShiLtJ_T0026796.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 113468219 113614175 + Mgat4c protein_coding processed_transcript MGP_NODShiLtJ_T0026797.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 113468393 113815240 + MGP_NODShiLtJ_P0026797 Mgat4c protein_coding protein_coding MGP_NODShiLtJ_T0026798.1 MGP_NODShiLtJ_G0017560.1 mouse_genomes_project 10 113785554 113814210 + MGP_NODShiLtJ_P0026798 Mgat4c protein_coding protein_coding MGP_NODShiLtJ_T0024930.1 MGP_NODShiLtJ_G0017062.1 mouse_genomes_project 10 46693928 46741043 + MGP_NODShiLtJ_P0024930 Rtn4ip1 protein_coding protein_coding MGP_NODShiLtJ_T0024931.1 MGP_NODShiLtJ_G0017062.1 mouse_genomes_project 10 46694510 46741052 + MGP_NODShiLtJ_P0024931 Rtn4ip1 protein_coding protein_coding MGP_NODShiLtJ_T0027404.1 MGP_NODShiLtJ_G0017794.1 mouse_genomes_project 10 146446225 146451009 - MGP_NODShiLtJ_P0027404 Olfr812 protein_coding protein_coding MGP_NODShiLtJ_T0027405.1 MGP_NODShiLtJ_G0017794.1 mouse_genomes_project 10 146446225 146447268 - MGP_NODShiLtJ_P0027405 Olfr812 protein_coding protein_coding MGP_NODShiLtJ_T0027334.1 MGP_NODShiLtJ_G0017748.1 mouse_genomes_project 10 145307774 145318229 - MGP_NODShiLtJ_P0027334 Gdf11 protein_coding protein_coding MGP_NODShiLtJ_T0026426.1 MGP_NODShiLtJ_G0017452.1 mouse_genomes_project 10 92735861 92782353 + MGP_NODShiLtJ_P0026426 1500009L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0024333.1 MGP_NODShiLtJ_G0016872.1 mouse_genomes_project 10 7223157 7279474 - MGP_NODShiLtJ_P0024333 Samd5 protein_coding protein_coding MGP_NODShiLtJ_T0026565.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98443267 98672754 - MGP_NODShiLtJ_P0026565 Ano4 protein_coding protein_coding MGP_NODShiLtJ_T0026566.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98443333 98795990 - MGP_NODShiLtJ_P0026566 Ano4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026567.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98488702 98528288 - Ano4 protein_coding processed_transcript MGP_NODShiLtJ_T0026568.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98518815 98795754 - Ano4 protein_coding retained_intron MGP_NODShiLtJ_T0026569.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98539356 98888519 - MGP_NODShiLtJ_P0026569 Ano4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026570.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98572923 98795790 - MGP_NODShiLtJ_P0026570 Ano4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026571.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98573475 98795336 - MGP_NODShiLtJ_P0026571 Ano4 protein_coding protein_coding MGP_NODShiLtJ_T0026572.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98606990 98856939 - MGP_NODShiLtJ_P0026572 Ano4 protein_coding protein_coding MGP_NODShiLtJ_T0026573.1 MGP_NODShiLtJ_G0017497.1 mouse_genomes_project 10 98877594 98888636 - Ano4 protein_coding processed_transcript MGP_NODShiLtJ_T0024456.1 MGP_NODShiLtJ_G0016899.1 mouse_genomes_project 10 17008325 17058631 - MGP_NODShiLtJ_P0024456 Heca protein_coding protein_coding MGP_NODShiLtJ_T0098649.1 MGP_NODShiLtJ_G0037043.1 mouse_genomes_project 10 116636749 116636906 - Gm22945 snRNA snRNA MGP_NODShiLtJ_T0003049.1 MGP_NODShiLtJ_G0002835.1 mouse_genomes_project 10 134825415 134841911 - Grip1os2 antisense antisense MGP_NODShiLtJ_T0025805.1 MGP_NODShiLtJ_G0017296.1 mouse_genomes_project 10 87225351 87232226 + MGP_NODShiLtJ_P0025805 Olfr8 protein_coding protein_coding MGP_NODShiLtJ_T0012260.1 MGP_NODShiLtJ_G0010368.1 mouse_genomes_project 10 888937 889830 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025172.1 MGP_NODShiLtJ_G0017138.1 mouse_genomes_project 10 67488121 67555019 - MGP_NODShiLtJ_P0025172 Pald1 protein_coding protein_coding MGP_NODShiLtJ_T0024474.1 MGP_NODShiLtJ_G0016904.1 mouse_genomes_project 10 17537684 17682030 + MGP_NODShiLtJ_P0024474 Nhsl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024475.1 MGP_NODShiLtJ_G0016904.1 mouse_genomes_project 10 17559129 17572582 + Nhsl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024476.1 MGP_NODShiLtJ_G0016904.1 mouse_genomes_project 10 17559166 17670246 + Nhsl1 protein_coding retained_intron MGP_NODShiLtJ_T0024477.1 MGP_NODShiLtJ_G0016904.1 mouse_genomes_project 10 17559166 17691633 + MGP_NODShiLtJ_P0024477 Nhsl1 protein_coding protein_coding MGP_NODShiLtJ_T0024478.1 MGP_NODShiLtJ_G0016904.1 mouse_genomes_project 10 17623267 17626787 + Nhsl1 protein_coding retained_intron MGP_NODShiLtJ_T0024479.1 MGP_NODShiLtJ_G0016904.1 mouse_genomes_project 10 17623347 17654349 + Nhsl1 protein_coding processed_transcript MGP_NODShiLtJ_T0024480.1 MGP_NODShiLtJ_G0016904.1 mouse_genomes_project 10 17623360 17683700 + MGP_NODShiLtJ_P0024480 Nhsl1 protein_coding protein_coding MGP_NODShiLtJ_T0024481.1 MGP_NODShiLtJ_G0016904.1 mouse_genomes_project 10 17623360 17691630 + MGP_NODShiLtJ_P0024481 Nhsl1 protein_coding protein_coding MGP_NODShiLtJ_T0026736.1 MGP_NODShiLtJ_G0017532.1 mouse_genomes_project 10 105559869 105582954 - MGP_NODShiLtJ_P0026736 Mrpl42 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003013.1 MGP_NODShiLtJ_G0002811.1 mouse_genomes_project 10 89870958 89874789 + Atcayos antisense antisense MGP_NODShiLtJ_T0003014.1 MGP_NODShiLtJ_G0002811.1 mouse_genomes_project 10 89871032 89885507 + Atcayos antisense antisense MGP_NODShiLtJ_T0003015.1 MGP_NODShiLtJ_G0002811.1 mouse_genomes_project 10 89871040 89887223 + Atcayos antisense antisense MGP_NODShiLtJ_T0024501.1 MGP_NODShiLtJ_G0016914.1 mouse_genomes_project 10 18930272 18988141 + MGP_NODShiLtJ_P0024501 Il20ra protein_coding protein_coding MGP_NODShiLtJ_T0009483.1 MGP_NODShiLtJ_G0007616.1 mouse_genomes_project 10 24794860 24794930 + Mir6905 miRNA miRNA MGP_NODShiLtJ_T0025532.1 MGP_NODShiLtJ_G0017213.1 mouse_genomes_project 10 83350648 83542952 - MGP_NODShiLtJ_P0025532 Gucd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025536.1 MGP_NODShiLtJ_G0017213.1 mouse_genomes_project 10 83432873 83536966 - MGP_NODShiLtJ_P0025536 Gucd1 protein_coding protein_coding MGP_NODShiLtJ_T0025538.1 MGP_NODShiLtJ_G0017213.1 mouse_genomes_project 10 83532497 83542875 - MGP_NODShiLtJ_P0025538 Gucd1 protein_coding protein_coding MGP_NODShiLtJ_T0025539.1 MGP_NODShiLtJ_G0017213.1 mouse_genomes_project 10 83534482 83542968 - MGP_NODShiLtJ_P0025539 Gucd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025540.1 MGP_NODShiLtJ_G0017213.1 mouse_genomes_project 10 83534516 83536949 - Gucd1 protein_coding retained_intron MGP_NODShiLtJ_T0025541.1 MGP_NODShiLtJ_G0017213.1 mouse_genomes_project 10 83534649 83542849 - MGP_NODShiLtJ_P0025541 Gucd1 protein_coding protein_coding MGP_NODShiLtJ_T0025542.1 MGP_NODShiLtJ_G0017213.1 mouse_genomes_project 10 83535401 83543500 - MGP_NODShiLtJ_P0025542 Gucd1 protein_coding protein_coding MGP_NODShiLtJ_T0025543.1 MGP_NODShiLtJ_G0017213.1 mouse_genomes_project 10 83536864 83542939 - MGP_NODShiLtJ_P0025543 Gucd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024911.1 MGP_NODShiLtJ_G0017055.1 mouse_genomes_project 10 45904511 45907306 + MGP_NODShiLtJ_P0024911 9030612E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0027356.1 MGP_NODShiLtJ_G0017759.1 mouse_genomes_project 10 145547444 145548528 - MGP_NODShiLtJ_P0027356 Olfr769 protein_coding protein_coding MGP_NODShiLtJ_T0027394.1 MGP_NODShiLtJ_G0017786.1 mouse_genomes_project 10 146240639 146241566 - MGP_NODShiLtJ_P0027394 Olfr803 protein_coding protein_coding MGP_NODShiLtJ_T0025810.1 MGP_NODShiLtJ_G0017298.1 mouse_genomes_project 10 87362520 87366192 + MGP_NODShiLtJ_P0025810 Olfr1352 protein_coding protein_coding MGP_NODShiLtJ_T0025811.1 MGP_NODShiLtJ_G0017298.1 mouse_genomes_project 10 87362585 87365729 + MGP_NODShiLtJ_P0025811 Olfr1352 protein_coding protein_coding MGP_NODShiLtJ_T0026833.1 MGP_NODShiLtJ_G0017576.1 mouse_genomes_project 10 121462993 121550480 + MGP_NODShiLtJ_P0026833 Pawr protein_coding protein_coding MGP_NODShiLtJ_T0024783.1 MGP_NODShiLtJ_G0017018.1 mouse_genomes_project 10 42271773 42278398 - MGP_NODShiLtJ_P0024783 Mfsd4b4 protein_coding protein_coding MGP_NODShiLtJ_T0024784.1 MGP_NODShiLtJ_G0017018.1 mouse_genomes_project 10 42271825 42278106 - MGP_NODShiLtJ_P0024784 Mfsd4b4 protein_coding protein_coding MGP_NODShiLtJ_T0027342.1 MGP_NODShiLtJ_G0017751.1 mouse_genomes_project 10 145343939 145349582 - MGP_NODShiLtJ_P0027342 Bloc1s1 protein_coding protein_coding MGP_NODShiLtJ_T0027345.1 MGP_NODShiLtJ_G0017751.1 mouse_genomes_project 10 145345971 145349582 - MGP_NODShiLtJ_P0027345 Bloc1s1 protein_coding protein_coding MGP_NODShiLtJ_T0027346.1 MGP_NODShiLtJ_G0017751.1 mouse_genomes_project 10 145346004 145350093 - MGP_NODShiLtJ_P0027346 Bloc1s1 protein_coding protein_coding MGP_NODShiLtJ_T0027347.1 MGP_NODShiLtJ_G0017751.1 mouse_genomes_project 10 145346100 145349084 - Bloc1s1 protein_coding processed_transcript MGP_NODShiLtJ_T0027348.1 MGP_NODShiLtJ_G0017751.1 mouse_genomes_project 10 145348573 145349582 - Bloc1s1 protein_coding retained_intron MGP_NODShiLtJ_T0002972.1 MGP_NODShiLtJ_G0002779.1 mouse_genomes_project 10 34906091 34942044 + Gm15939 antisense antisense MGP_NODShiLtJ_T0024308.1 MGP_NODShiLtJ_G0016864.1 mouse_genomes_project 10 5176992 5214424 + MGP_NODShiLtJ_P0024308 Katna1 protein_coding protein_coding MGP_NODShiLtJ_T0024309.1 MGP_NODShiLtJ_G0016864.1 mouse_genomes_project 10 5176992 5214425 + MGP_NODShiLtJ_P0024309 Katna1 protein_coding protein_coding MGP_NODShiLtJ_T0024310.1 MGP_NODShiLtJ_G0016864.1 mouse_genomes_project 10 5177000 5204438 + MGP_NODShiLtJ_P0024310 Katna1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024311.1 MGP_NODShiLtJ_G0016864.1 mouse_genomes_project 10 5201932 5211511 + Katna1 protein_coding retained_intron MGP_NODShiLtJ_T0024312.1 MGP_NODShiLtJ_G0016864.1 mouse_genomes_project 10 5211049 5214339 + MGP_NODShiLtJ_P0024312 Katna1 protein_coding protein_coding MGP_NODShiLtJ_T0024313.1 MGP_NODShiLtJ_G0016864.1 mouse_genomes_project 10 5212506 5214423 + MGP_NODShiLtJ_P0024313 Katna1 protein_coding protein_coding MGP_NODShiLtJ_T0099835.1 MGP_NODShiLtJ_G0038229.1 mouse_genomes_project 10 9501493 9501623 + Gm22546 snoRNA snoRNA MGP_NODShiLtJ_T0026388.1 MGP_NODShiLtJ_G0017443.1 mouse_genomes_project 10 91662182 91677673 - MGP_NODShiLtJ_P0026388 Nfyb protein_coding protein_coding MGP_NODShiLtJ_T0026389.1 MGP_NODShiLtJ_G0017443.1 mouse_genomes_project 10 91662774 91677630 - Nfyb protein_coding retained_intron MGP_NODShiLtJ_T0026390.1 MGP_NODShiLtJ_G0017443.1 mouse_genomes_project 10 91663963 91665147 - Nfyb protein_coding retained_intron MGP_NODShiLtJ_T0026391.1 MGP_NODShiLtJ_G0017443.1 mouse_genomes_project 10 91664653 91666036 - Nfyb protein_coding retained_intron MGP_NODShiLtJ_T0026392.1 MGP_NODShiLtJ_G0017443.1 mouse_genomes_project 10 91665901 91677187 - Nfyb protein_coding processed_transcript MGP_NODShiLtJ_T0026393.1 MGP_NODShiLtJ_G0017443.1 mouse_genomes_project 10 91666003 91677170 - MGP_NODShiLtJ_P0026393 Nfyb protein_coding protein_coding MGP_NODShiLtJ_T0026394.1 MGP_NODShiLtJ_G0017443.1 mouse_genomes_project 10 91668593 91670834 - Nfyb protein_coding retained_intron MGP_NODShiLtJ_T0024596.1 MGP_NODShiLtJ_G0016949.1 mouse_genomes_project 10 23731262 23732495 + MGP_NODShiLtJ_P0024596 Taar7b protein_coding protein_coding MGP_NODShiLtJ_T0026478.1 MGP_NODShiLtJ_G0017472.1 mouse_genomes_project 10 95540597 95607291 + MGP_NODShiLtJ_P0026478 Timp3 protein_coding protein_coding MGP_NODShiLtJ_T0026479.1 MGP_NODShiLtJ_G0017472.1 mouse_genomes_project 10 95540779 95546974 + Timp3 protein_coding processed_transcript MGP_NODShiLtJ_T0026480.1 MGP_NODShiLtJ_G0017472.1 mouse_genomes_project 10 95540781 95577843 + Timp3 protein_coding processed_transcript MGP_NODShiLtJ_T0026481.1 MGP_NODShiLtJ_G0017472.1 mouse_genomes_project 10 95543074 95601777 + MGP_NODShiLtJ_P0026481 Timp3 protein_coding protein_coding MGP_NODShiLtJ_T0024371.1 MGP_NODShiLtJ_G0016881.1 mouse_genomes_project 10 10317365 10492634 - MGP_NODShiLtJ_P0024371 Utrn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024372.1 MGP_NODShiLtJ_G0016881.1 mouse_genomes_project 10 10317367 10827359 - MGP_NODShiLtJ_P0024372 Utrn protein_coding protein_coding MGP_NODShiLtJ_T0024373.1 MGP_NODShiLtJ_G0016881.1 mouse_genomes_project 10 10571018 10834975 - MGP_NODShiLtJ_P0024373 Utrn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024839.1 MGP_NODShiLtJ_G0017040.1 mouse_genomes_project 10 44094171 44105813 + MGP_NODShiLtJ_P0024839 Cd164 protein_coding protein_coding MGP_NODShiLtJ_T0024840.1 MGP_NODShiLtJ_G0017040.1 mouse_genomes_project 10 44094258 44100025 + Cd164 protein_coding retained_intron MGP_NODShiLtJ_T0024841.1 MGP_NODShiLtJ_G0017040.1 mouse_genomes_project 10 44094649 44103811 + MGP_NODShiLtJ_P0024841 Cd164 protein_coding protein_coding MGP_NODShiLtJ_T0024842.1 MGP_NODShiLtJ_G0017040.1 mouse_genomes_project 10 44094801 44101629 + Cd164 protein_coding processed_transcript MGP_NODShiLtJ_T0027048.1 MGP_NODShiLtJ_G0017650.1 mouse_genomes_project 10 137845507 137850462 + MGP_NODShiLtJ_P0027048 Avpr1a protein_coding protein_coding MGP_NODShiLtJ_T0009527.1 MGP_NODShiLtJ_G0007660.1 mouse_genomes_project 10 102437829 102437923 + Gm22582 miRNA miRNA MGP_NODShiLtJ_T0024612.1 MGP_NODShiLtJ_G0016958.1 mouse_genomes_project 10 24636897 24717257 - MGP_NODShiLtJ_P0024612 Enpp3 protein_coding protein_coding MGP_NODShiLtJ_T0016984.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41972463 42090233 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016985.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41972465 42090232 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016986.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41973676 42090042 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016987.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41973706 42090075 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016988.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41973749 42090227 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016989.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41973765 42090040 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016990.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41974027 42090002 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016991.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41991281 41998526 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016992.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 41991373 42090208 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016993.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 42006428 42086019 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016994.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 42006996 42090232 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016995.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 42031936 42090232 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016996.1 MGP_NODShiLtJ_G0015004.1 mouse_genomes_project 10 42078210 42090193 - E130307A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0024587.1 MGP_NODShiLtJ_G0016940.1 mouse_genomes_project 10 23612677 23624719 + MGP_NODShiLtJ_P0024587 Vnn1 protein_coding protein_coding MGP_NODShiLtJ_T0000816.1 MGP_NODShiLtJ_G0000746.1 mouse_genomes_project 10 135854810 135859280 - TEC TEC MGP_NODShiLtJ_T0099842.1 MGP_NODShiLtJ_G0038236.1 mouse_genomes_project 10 23500210 23500284 - Snord100 snoRNA snoRNA MGP_NODShiLtJ_T0024925.1 MGP_NODShiLtJ_G0017060.1 mouse_genomes_project 10 46379220 46417915 + MGP_NODShiLtJ_P0024925 F930017D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0012306.1 MGP_NODShiLtJ_G0010414.1 mouse_genomes_project 10 84004476 84004869 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025272.1 MGP_NODShiLtJ_G0017167.1 mouse_genomes_project 10 69257225 69292076 + MGP_NODShiLtJ_P0025272 Slc25a16 protein_coding protein_coding MGP_NODShiLtJ_T0025273.1 MGP_NODShiLtJ_G0017167.1 mouse_genomes_project 10 69257259 69271165 + Slc25a16 protein_coding retained_intron MGP_NODShiLtJ_T0025274.1 MGP_NODShiLtJ_G0017167.1 mouse_genomes_project 10 69257272 69290007 + MGP_NODShiLtJ_P0025274 Slc25a16 protein_coding protein_coding MGP_NODShiLtJ_T0025275.1 MGP_NODShiLtJ_G0017167.1 mouse_genomes_project 10 69288019 69290012 + Slc25a16 protein_coding retained_intron MGP_NODShiLtJ_T0025962.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88671946 88688298 + MGP_NODShiLtJ_P0025962 Stk11 protein_coding protein_coding MGP_NODShiLtJ_T0025963.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88671955 88688289 + MGP_NODShiLtJ_P0025963 Stk11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025964.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88671955 88688502 + MGP_NODShiLtJ_P0025964 Stk11 protein_coding protein_coding MGP_NODShiLtJ_T0025965.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88672499 88688290 + MGP_NODShiLtJ_P0025965 Stk11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025966.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88672506 88673966 + Stk11 protein_coding processed_transcript MGP_NODShiLtJ_T0025967.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88682638 88687795 + Stk11 protein_coding retained_intron MGP_NODShiLtJ_T0025968.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88683194 88684329 + Stk11 protein_coding retained_intron MGP_NODShiLtJ_T0025969.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88684205 88686019 + Stk11 protein_coding retained_intron MGP_NODShiLtJ_T0025970.1 MGP_NODShiLtJ_G0017343.1 mouse_genomes_project 10 88684501 88688290 + MGP_NODShiLtJ_P0025970 Stk11 protein_coding protein_coding MGP_NODShiLtJ_T0011177.1 MGP_NODShiLtJ_G0009310.1 mouse_genomes_project 10 129399906 129400231 - Gm25319 misc_RNA misc_RNA MGP_NODShiLtJ_T0024817.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44050130 44060849 + MGP_NODShiLtJ_P0024817 Mical1 protein_coding protein_coding MGP_NODShiLtJ_T0024818.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44050130 44060847 + MGP_NODShiLtJ_P0024818 Mical1 protein_coding protein_coding MGP_NODShiLtJ_T0024819.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44050152 44059042 + Mical1 protein_coding retained_intron MGP_NODShiLtJ_T0024820.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44050184 44060849 + MGP_NODShiLtJ_P0024820 Mical1 protein_coding protein_coding MGP_NODShiLtJ_T0024821.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44050193 44060849 + MGP_NODShiLtJ_P0024821 Mical1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024822.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44050895 44052002 + MGP_NODShiLtJ_P0024822 Mical1 protein_coding protein_coding MGP_NODShiLtJ_T0024823.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44052294 44054982 + Mical1 protein_coding retained_intron MGP_NODShiLtJ_T0024824.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44053804 44054975 + Mical1 protein_coding retained_intron MGP_NODShiLtJ_T0024825.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44055523 44056533 + Mical1 protein_coding retained_intron MGP_NODShiLtJ_T0024826.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44057890 44058888 + Mical1 protein_coding retained_intron MGP_NODShiLtJ_T0024828.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44059927 44060537 + Mical1 protein_coding retained_intron MGP_NODShiLtJ_T0024829.1 MGP_NODShiLtJ_G0017037.1 mouse_genomes_project 10 44060188 44060847 + Mical1 protein_coding retained_intron MGP_NODShiLtJ_T0009480.1 MGP_NODShiLtJ_G0007613.1 mouse_genomes_project 10 9830169 9830256 + Gm22194 miRNA miRNA MGP_NODShiLtJ_T0026800.1 MGP_NODShiLtJ_G0017562.1 mouse_genomes_project 10 113956850 113994421 + MGP_NODShiLtJ_P0026800 Rassf9 protein_coding protein_coding MGP_NODShiLtJ_T0025845.1 MGP_NODShiLtJ_G0017313.1 mouse_genomes_project 10 88197858 88204058 + MGP_NODShiLtJ_P0025845 Cdc34 protein_coding protein_coding MGP_NODShiLtJ_T0025846.1 MGP_NODShiLtJ_G0017313.1 mouse_genomes_project 10 88197967 88204058 + MGP_NODShiLtJ_P0025846 Cdc34 protein_coding protein_coding MGP_NODShiLtJ_T0024334.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7381219 7556294 - MGP_NODShiLtJ_P0024334 Stxbp5 protein_coding protein_coding MGP_NODShiLtJ_T0024335.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7385517 7556638 - MGP_NODShiLtJ_P0024335 Stxbp5 protein_coding protein_coding MGP_NODShiLtJ_T0024336.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7385555 7427960 - Stxbp5 protein_coding processed_transcript MGP_NODShiLtJ_T0024337.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7386140 7407145 - Stxbp5 protein_coding retained_intron MGP_NODShiLtJ_T0024338.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7386472 7556242 - MGP_NODShiLtJ_P0024338 Stxbp5 protein_coding protein_coding MGP_NODShiLtJ_T0024339.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7393906 7397329 - Stxbp5 protein_coding retained_intron MGP_NODShiLtJ_T0024340.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7393909 7395756 - Stxbp5 protein_coding retained_intron MGP_NODShiLtJ_T0024341.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7394016 7405126 - Stxbp5 protein_coding retained_intron MGP_NODShiLtJ_T0024342.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7396244 7428120 - MGP_NODShiLtJ_P0024342 Stxbp5 protein_coding protein_coding MGP_NODShiLtJ_T0024343.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7396410 7405126 - Stxbp5 protein_coding retained_intron MGP_NODShiLtJ_T0024344.1 MGP_NODShiLtJ_G0016873.1 mouse_genomes_project 10 7415807 7428091 - Stxbp5 protein_coding retained_intron MGP_NODShiLtJ_T0025971.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88688270 88695207 - MGP_NODShiLtJ_P0025971 Cbarp protein_coding protein_coding MGP_NODShiLtJ_T0025972.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88688270 88695207 - MGP_NODShiLtJ_P0025972 Cbarp protein_coding protein_coding MGP_NODShiLtJ_T0025973.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88688370 88697132 - MGP_NODShiLtJ_P0025973 Cbarp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025974.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88688370 88697132 - MGP_NODShiLtJ_P0025974 Cbarp protein_coding protein_coding MGP_NODShiLtJ_T0025975.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88690355 88692501 - Cbarp protein_coding retained_intron MGP_NODShiLtJ_T0025976.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88690799 88695182 - MGP_NODShiLtJ_P0025976 Cbarp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025977.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88690893 88693408 - Cbarp protein_coding retained_intron MGP_NODShiLtJ_T0025978.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88692937 88697130 - MGP_NODShiLtJ_P0025978 Cbarp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025979.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88692977 88696945 - MGP_NODShiLtJ_P0025979 Cbarp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025980.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88693335 88695735 - Cbarp protein_coding processed_transcript MGP_NODShiLtJ_T0025981.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88694464 88695722 - Cbarp protein_coding processed_transcript MGP_NODShiLtJ_T0025982.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88694482 88695172 - Cbarp protein_coding processed_transcript MGP_NODShiLtJ_T0025983.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88694527 88695470 - Cbarp protein_coding retained_intron MGP_NODShiLtJ_T0025984.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88694693 88695414 - Cbarp protein_coding retained_intron MGP_NODShiLtJ_T0025985.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88695166 88696383 - Cbarp protein_coding processed_transcript MGP_NODShiLtJ_T0025986.1 MGP_NODShiLtJ_G0017344.1 mouse_genomes_project 10 88695166 88698601 - MGP_NODShiLtJ_P0025986 Cbarp protein_coding protein_coding MGP_NODShiLtJ_T0024853.1 MGP_NODShiLtJ_G0017043.1 mouse_genomes_project 10 44238747 44285660 - MGP_NODShiLtJ_P0024853 protein_coding protein_coding MGP_NODShiLtJ_T0026912.1 MGP_NODShiLtJ_G0017606.1 mouse_genomes_project 10 130929948 131026479 + MGP_NODShiLtJ_P0026912 Ptprb protein_coding protein_coding MGP_NODShiLtJ_T0024444.1 MGP_NODShiLtJ_G0016895.1 mouse_genomes_project 10 12862242 12948064 + MGP_NODShiLtJ_P0024444 Nmbr protein_coding protein_coding MGP_NODShiLtJ_T0024445.1 MGP_NODShiLtJ_G0016895.1 mouse_genomes_project 10 12862248 12929207 + Nmbr protein_coding processed_transcript MGP_NODShiLtJ_T0024446.1 MGP_NODShiLtJ_G0016895.1 mouse_genomes_project 10 12862260 12940311 + Nmbr protein_coding processed_transcript MGP_NODShiLtJ_T0024447.1 MGP_NODShiLtJ_G0016895.1 mouse_genomes_project 10 12862272 12948589 + MGP_NODShiLtJ_P0024447 Nmbr protein_coding protein_coding MGP_NODShiLtJ_T0024448.1 MGP_NODShiLtJ_G0016895.1 mouse_genomes_project 10 12862278 12889448 + Nmbr protein_coding retained_intron MGP_NODShiLtJ_T0024450.1 MGP_NODShiLtJ_G0016895.1 mouse_genomes_project 10 12941449 12952131 + MGP_NODShiLtJ_P0024450 Nmbr protein_coding protein_coding MGP_NODShiLtJ_T0024451.1 MGP_NODShiLtJ_G0016895.1 mouse_genomes_project 10 12941511 12951864 + MGP_NODShiLtJ_P0024451 Nmbr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024452.1 MGP_NODShiLtJ_G0016895.1 mouse_genomes_project 10 12941511 12951864 + MGP_NODShiLtJ_P0024452 Nmbr protein_coding protein_coding MGP_NODShiLtJ_T0026808.1 MGP_NODShiLtJ_G0017566.1 mouse_genomes_project 10 117586783 117656090 - Tmtc2 protein_coding processed_transcript MGP_NODShiLtJ_T0026809.1 MGP_NODShiLtJ_G0017566.1 mouse_genomes_project 10 117586783 118025326 - MGP_NODShiLtJ_P0026809 Tmtc2 protein_coding protein_coding MGP_NODShiLtJ_T0026810.1 MGP_NODShiLtJ_G0017566.1 mouse_genomes_project 10 117588624 117656075 - Tmtc2 protein_coding processed_transcript MGP_NODShiLtJ_T0026811.1 MGP_NODShiLtJ_G0017566.1 mouse_genomes_project 10 117588783 117599679 - Tmtc2 protein_coding processed_transcript MGP_NODShiLtJ_T0026812.1 MGP_NODShiLtJ_G0017566.1 mouse_genomes_project 10 117695991 118025342 - Tmtc2 protein_coding retained_intron MGP_NODShiLtJ_T0026813.1 MGP_NODShiLtJ_G0017566.1 mouse_genomes_project 10 117849846 117983680 - Tmtc2 protein_coding processed_transcript MGP_NODShiLtJ_T0006023.1 MGP_NODShiLtJ_G0005037.1 mouse_genomes_project 10 24268307 24273475 + Gm15271 lincRNA lincRNA MGP_NODShiLtJ_T0026274.1 MGP_NODShiLtJ_G0017419.1 mouse_genomes_project 10 90081092 90083398 + MGP_NODShiLtJ_P0026274 Smim24 protein_coding protein_coding MGP_NODShiLtJ_T0026275.1 MGP_NODShiLtJ_G0017419.1 mouse_genomes_project 10 90081653 90083141 + Smim24 protein_coding processed_transcript MGP_NODShiLtJ_T0012289.1 MGP_NODShiLtJ_G0010397.1 mouse_genomes_project 10 57069569 57070120 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006006.1 MGP_NODShiLtJ_G0005025.1 mouse_genomes_project 10 7056713 7060866 - Gm28904 lincRNA lincRNA MGP_NODShiLtJ_T0026671.1 MGP_NODShiLtJ_G0017515.1 mouse_genomes_project 10 103447518 103466167 - MGP_NODShiLtJ_P0026671 Amdhd1 protein_coding protein_coding MGP_NODShiLtJ_T0024184.1 MGP_NODShiLtJ_G0016839.1 mouse_genomes_project 10 260892 368788 + MGP_NODShiLtJ_P0024184 Ppp1r14c protein_coding protein_coding MGP_NODShiLtJ_T0026939.1 MGP_NODShiLtJ_G0017615.1 mouse_genomes_project 10 131810505 131902383 - MGP_NODShiLtJ_P0026939 Frs2 protein_coding protein_coding MGP_NODShiLtJ_T0002992.1 MGP_NODShiLtJ_G0002793.1 mouse_genomes_project 10 69351149 69352022 + Gm16135 antisense antisense MGP_NODShiLtJ_T0006061.1 MGP_NODShiLtJ_G0005068.1 mouse_genomes_project 10 97798679 97803147 - Gm26546 lincRNA lincRNA MGP_NODShiLtJ_T0026175.1 MGP_NODShiLtJ_G0017396.1 mouse_genomes_project 10 89736977 89752757 - MGP_NODShiLtJ_P0026175 Creb3l3 protein_coding protein_coding MGP_NODShiLtJ_T0026176.1 MGP_NODShiLtJ_G0017396.1 mouse_genomes_project 10 89742654 89745288 - Creb3l3 protein_coding retained_intron MGP_NODShiLtJ_T0026177.1 MGP_NODShiLtJ_G0017396.1 mouse_genomes_project 10 89743334 89744618 - Creb3l3 protein_coding retained_intron MGP_NODShiLtJ_T0026178.1 MGP_NODShiLtJ_G0017396.1 mouse_genomes_project 10 89745343 89752637 - Creb3l3 protein_coding processed_transcript MGP_NODShiLtJ_T0099882.1 MGP_NODShiLtJ_G0038276.1 mouse_genomes_project 10 124373447 124373575 + Gm23698 snoRNA snoRNA MGP_NODShiLtJ_T0025793.1 MGP_NODShiLtJ_G0017287.1 mouse_genomes_project 10 86909238 86919234 + MGP_NODShiLtJ_P0025793 Ilvbl protein_coding protein_coding MGP_NODShiLtJ_T0099876.1 MGP_NODShiLtJ_G0038270.1 mouse_genomes_project 10 112566364 112566496 + Gm26278 snoRNA snoRNA MGP_NODShiLtJ_T0025533.1 MGP_NODShiLtJ_G0017214.1 mouse_genomes_project 10 83422516 83459271 + MGP_NODShiLtJ_P0025533 Upb1 protein_coding protein_coding MGP_NODShiLtJ_T0025534.1 MGP_NODShiLtJ_G0017214.1 mouse_genomes_project 10 83422563 83442216 + Upb1 protein_coding retained_intron MGP_NODShiLtJ_T0025535.1 MGP_NODShiLtJ_G0017214.1 mouse_genomes_project 10 83425689 83445434 + Upb1 protein_coding retained_intron MGP_NODShiLtJ_T0025537.1 MGP_NODShiLtJ_G0017214.1 mouse_genomes_project 10 83445837 83447975 + Upb1 protein_coding retained_intron MGP_NODShiLtJ_T0024599.1 MGP_NODShiLtJ_G0016952.1 mouse_genomes_project 10 23860258 23869027 - MGP_NODShiLtJ_P0024599 protein_coding protein_coding MGP_NODShiLtJ_T0026466.1 MGP_NODShiLtJ_G0017469.1 mouse_genomes_project 10 95209544 95262030 - MGP_NODShiLtJ_P0026466 Bpifc protein_coding protein_coding MGP_NODShiLtJ_T0026467.1 MGP_NODShiLtJ_G0017469.1 mouse_genomes_project 10 95246060 95261991 - MGP_NODShiLtJ_P0026467 Bpifc protein_coding protein_coding MGP_NODShiLtJ_T0024453.1 MGP_NODShiLtJ_G0016897.1 mouse_genomes_project 10 16791606 16794052 + MGP_NODShiLtJ_P0024453 Cited2 protein_coding protein_coding MGP_NODShiLtJ_T0099856.1 MGP_NODShiLtJ_G0038250.1 mouse_genomes_project 10 49839685 49839816 - Gm23481 snoRNA snoRNA MGP_NODShiLtJ_T0026226.1 MGP_NODShiLtJ_G0017409.1 mouse_genomes_project 10 89955467 89973820 - MGP_NODShiLtJ_P0026226 Tjp3 protein_coding protein_coding MGP_NODShiLtJ_T0025591.1 MGP_NODShiLtJ_G0017229.1 mouse_genomes_project 10 83955374 83979743 - MGP_NODShiLtJ_P0025591 Smarcb1 protein_coding protein_coding MGP_NODShiLtJ_T0025592.1 MGP_NODShiLtJ_G0017229.1 mouse_genomes_project 10 83955378 83972311 - Smarcb1 protein_coding retained_intron MGP_NODShiLtJ_T0025593.1 MGP_NODShiLtJ_G0017229.1 mouse_genomes_project 10 83955380 83974706 - Smarcb1 protein_coding retained_intron MGP_NODShiLtJ_T0025594.1 MGP_NODShiLtJ_G0017229.1 mouse_genomes_project 10 83955382 83979740 - MGP_NODShiLtJ_P0025594 Smarcb1 protein_coding protein_coding MGP_NODShiLtJ_T0025595.1 MGP_NODShiLtJ_G0017229.1 mouse_genomes_project 10 83956133 83979715 - MGP_NODShiLtJ_P0025595 Smarcb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025596.1 MGP_NODShiLtJ_G0017229.1 mouse_genomes_project 10 83968416 83973298 - MGP_NODShiLtJ_P0025596 Smarcb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024306.1 MGP_NODShiLtJ_G0016863.1 mouse_genomes_project 10 5130276 5167434 + MGP_NODShiLtJ_P0024306 Lats1 protein_coding protein_coding MGP_NODShiLtJ_T0024307.1 MGP_NODShiLtJ_G0016863.1 mouse_genomes_project 10 5141100 5164640 + MGP_NODShiLtJ_P0024307 Lats1 protein_coding protein_coding MGP_NODShiLtJ_T0025199.1 MGP_NODShiLtJ_G0017150.1 mouse_genomes_project 10 68303470 68307264 + MGP_NODShiLtJ_P0025199 protein_coding protein_coding MGP_NODShiLtJ_T0006005.1 MGP_NODShiLtJ_G0005024.1 mouse_genomes_project 10 6422349 6424621 + Gm26674 lincRNA lincRNA MGP_NODShiLtJ_T0006002.1 MGP_NODShiLtJ_G0005021.1 mouse_genomes_project 10 258815 263360 - Gm26752 lincRNA lincRNA MGP_NODShiLtJ_T0101033.1 MGP_NODShiLtJ_G0039409.1 mouse_genomes_project 10 96205810 96209048 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0025676.1 MGP_NODShiLtJ_G0017254.1 mouse_genomes_project 10 85446584 85456871 + MGP_NODShiLtJ_P0025676 Pofut2 protein_coding protein_coding MGP_NODShiLtJ_T0026677.1 MGP_NODShiLtJ_G0017517.1 mouse_genomes_project 10 103511455 103518043 - MGP_NODShiLtJ_P0026677 Snrpf protein_coding protein_coding MGP_NODShiLtJ_T0027287.1 MGP_NODShiLtJ_G0017727.1 mouse_genomes_project 10 144825261 144859335 + MGP_NODShiLtJ_P0027287 Smarcc2 protein_coding protein_coding MGP_NODShiLtJ_T0027288.1 MGP_NODShiLtJ_G0017727.1 mouse_genomes_project 10 144825261 144859335 + MGP_NODShiLtJ_P0027288 Smarcc2 protein_coding protein_coding MGP_NODShiLtJ_T0027289.1 MGP_NODShiLtJ_G0017727.1 mouse_genomes_project 10 144825261 144859335 + MGP_NODShiLtJ_P0027289 Smarcc2 protein_coding protein_coding MGP_NODShiLtJ_T0006095.1 MGP_NODShiLtJ_G0005086.1 mouse_genomes_project 10 131679491 131682181 + D630029K05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006096.1 MGP_NODShiLtJ_G0005086.1 mouse_genomes_project 10 131679524 131682367 + D630029K05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006097.1 MGP_NODShiLtJ_G0005086.1 mouse_genomes_project 10 131680539 131682497 + D630029K05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006098.1 MGP_NODShiLtJ_G0005086.1 mouse_genomes_project 10 131681058 131683890 + D630029K05Rik lincRNA lincRNA MGP_NODShiLtJ_T0024330.1 MGP_NODShiLtJ_G0016869.1 mouse_genomes_project 10 5704722 6035555 - MGP_NODShiLtJ_P0024330 Ust protein_coding protein_coding MGP_NODShiLtJ_T0009557.1 MGP_NODShiLtJ_G0007690.1 mouse_genomes_project 10 144937857 144937976 - miRNA miRNA MGP_NODShiLtJ_T0026564.1 MGP_NODShiLtJ_G0017496.1 mouse_genomes_project 10 98372338 98427843 + MGP_NODShiLtJ_P0026564 Slc5a8 protein_coding protein_coding MGP_NODShiLtJ_T0024762.1 MGP_NODShiLtJ_G0017015.1 mouse_genomes_project 10 41711276 41861483 + MGP_NODShiLtJ_P0024762 Fyn protein_coding protein_coding MGP_NODShiLtJ_T0024763.1 MGP_NODShiLtJ_G0017015.1 mouse_genomes_project 10 41712187 41913079 + MGP_NODShiLtJ_P0024763 Fyn protein_coding protein_coding MGP_NODShiLtJ_T0024764.1 MGP_NODShiLtJ_G0017015.1 mouse_genomes_project 10 41712226 41912121 + MGP_NODShiLtJ_P0024764 Fyn protein_coding protein_coding MGP_NODShiLtJ_T0024765.1 MGP_NODShiLtJ_G0017015.1 mouse_genomes_project 10 41762427 41857672 + MGP_NODShiLtJ_P0024765 Fyn protein_coding protein_coding MGP_NODShiLtJ_T0024766.1 MGP_NODShiLtJ_G0017015.1 mouse_genomes_project 10 41790547 41913072 + MGP_NODShiLtJ_P0024766 Fyn protein_coding protein_coding MGP_NODShiLtJ_T0024767.1 MGP_NODShiLtJ_G0017015.1 mouse_genomes_project 10 41798846 41912053 + MGP_NODShiLtJ_P0024767 Fyn protein_coding protein_coding MGP_NODShiLtJ_T0024768.1 MGP_NODShiLtJ_G0017015.1 mouse_genomes_project 10 41798956 41912053 + MGP_NODShiLtJ_P0024768 Fyn protein_coding protein_coding MGP_NODShiLtJ_T0024769.1 MGP_NODShiLtJ_G0017015.1 mouse_genomes_project 10 41880985 41899137 + Fyn protein_coding processed_transcript MGP_NODShiLtJ_T0026678.1 MGP_NODShiLtJ_G0017518.1 mouse_genomes_project 10 103517748 103531290 + MGP_NODShiLtJ_P0026678 4933408J17Rik protein_coding protein_coding MGP_NODShiLtJ_T0027374.1 MGP_NODShiLtJ_G0017771.1 mouse_genomes_project 10 145910555 145920663 + MGP_NODShiLtJ_P0027374 Olfr786 protein_coding protein_coding MGP_NODShiLtJ_T0027375.1 MGP_NODShiLtJ_G0017771.1 mouse_genomes_project 10 145919724 145920663 + MGP_NODShiLtJ_P0027375 Olfr786 protein_coding protein_coding MGP_NODShiLtJ_T0025303.1 MGP_NODShiLtJ_G0017174.1 mouse_genomes_project 10 69623606 69711177 + MGP_NODShiLtJ_P0025303 Herc4 protein_coding protein_coding MGP_NODShiLtJ_T0025304.1 MGP_NODShiLtJ_G0017174.1 mouse_genomes_project 10 69623768 69710784 + MGP_NODShiLtJ_P0025304 Herc4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024351.1 MGP_NODShiLtJ_G0016875.1 mouse_genomes_project 10 8261773 8274924 - MGP_NODShiLtJ_P0024351 Rab32 protein_coding protein_coding MGP_NODShiLtJ_T0099832.1 MGP_NODShiLtJ_G0038226.1 mouse_genomes_project 10 7485089 7485220 - Gm25635 snoRNA snoRNA MGP_NODShiLtJ_T0027115.1 MGP_NODShiLtJ_G0017674.1 mouse_genomes_project 10 143399377 143441834 - MGP_NODShiLtJ_P0027115 Kif5a protein_coding protein_coding MGP_NODShiLtJ_T0024645.1 MGP_NODShiLtJ_G0016968.1 mouse_genomes_project 10 26823843 26941782 + MGP_NODShiLtJ_P0024645 Arhgap18 protein_coding protein_coding MGP_NODShiLtJ_T0024646.1 MGP_NODShiLtJ_G0016968.1 mouse_genomes_project 10 26842907 27006792 + MGP_NODShiLtJ_P0024646 Arhgap18 protein_coding protein_coding MGP_NODShiLtJ_T0024647.1 MGP_NODShiLtJ_G0016968.1 mouse_genomes_project 10 26901837 26929098 + MGP_NODShiLtJ_P0024647 Arhgap18 protein_coding protein_coding MGP_NODShiLtJ_T0024648.1 MGP_NODShiLtJ_G0016968.1 mouse_genomes_project 10 26944386 27006602 + Arhgap18 protein_coding processed_transcript MGP_NODShiLtJ_T0024995.1 MGP_NODShiLtJ_G0017090.1 mouse_genomes_project 10 58573680 58575500 + MGP_NODShiLtJ_P0024995 Tmem229b-ps protein_coding protein_coding MGP_NODShiLtJ_T0009518.1 MGP_NODShiLtJ_G0007651.1 mouse_genomes_project 10 89953857 89953948 + Mir3057 miRNA miRNA MGP_NODShiLtJ_T0025013.1 MGP_NODShiLtJ_G0017095.1 mouse_genomes_project 10 61579074 61821363 - MGP_NODShiLtJ_P0025013 Tbc1d32 protein_coding protein_coding MGP_NODShiLtJ_T0024980.1 MGP_NODShiLtJ_G0017082.1 mouse_genomes_project 10 57200442 57296727 + MGP_NODShiLtJ_P0024980 Dcbld1 protein_coding protein_coding MGP_NODShiLtJ_T0024981.1 MGP_NODShiLtJ_G0017082.1 mouse_genomes_project 10 57200456 57258956 + Dcbld1 protein_coding retained_intron MGP_NODShiLtJ_T0024982.1 MGP_NODShiLtJ_G0017082.1 mouse_genomes_project 10 57200460 57296729 + MGP_NODShiLtJ_P0024982 Dcbld1 protein_coding protein_coding MGP_NODShiLtJ_T0098636.1 MGP_NODShiLtJ_G0037030.1 mouse_genomes_project 10 92091350 92091453 - Gm23122 snRNA snRNA MGP_NODShiLtJ_T0024565.1 MGP_NODShiLtJ_G0016931.1 mouse_genomes_project 10 21678895 21872927 + MGP_NODShiLtJ_P0024565 protein_coding protein_coding MGP_NODShiLtJ_T0099867.1 MGP_NODShiLtJ_G0038261.1 mouse_genomes_project 10 80110204 80110337 + Gm24984 snoRNA snoRNA MGP_NODShiLtJ_T0025146.1 MGP_NODShiLtJ_G0017132.1 mouse_genomes_project 10 66858222 66932384 - MGP_NODShiLtJ_P0025146 Unc5b protein_coding protein_coding MGP_NODShiLtJ_T0003032.1 MGP_NODShiLtJ_G0002825.1 mouse_genomes_project 10 103600344 103609469 - Gm15915 antisense antisense MGP_NODShiLtJ_T0006024.1 MGP_NODShiLtJ_G0005038.1 mouse_genomes_project 10 35675495 35678491 - Gm26564 lincRNA lincRNA MGP_NODShiLtJ_T0027337.1 MGP_NODShiLtJ_G0017750.1 mouse_genomes_project 10 145339607 145345355 - MGP_NODShiLtJ_P0027337 Rdh5 protein_coding protein_coding MGP_NODShiLtJ_T0027338.1 MGP_NODShiLtJ_G0017750.1 mouse_genomes_project 10 145339831 145344110 - MGP_NODShiLtJ_P0027338 Rdh5 protein_coding protein_coding MGP_NODShiLtJ_T0027339.1 MGP_NODShiLtJ_G0017750.1 mouse_genomes_project 10 145339860 145340638 - Rdh5 protein_coding retained_intron MGP_NODShiLtJ_T0027340.1 MGP_NODShiLtJ_G0017750.1 mouse_genomes_project 10 145340239 145345330 - MGP_NODShiLtJ_P0027340 Rdh5 protein_coding protein_coding MGP_NODShiLtJ_T0027341.1 MGP_NODShiLtJ_G0017750.1 mouse_genomes_project 10 145343358 145345355 - Rdh5 protein_coding retained_intron MGP_NODShiLtJ_T0027343.1 MGP_NODShiLtJ_G0017750.1 mouse_genomes_project 10 145343981 145344763 - MGP_NODShiLtJ_P0027343 Rdh5 protein_coding protein_coding MGP_NODShiLtJ_T0027344.1 MGP_NODShiLtJ_G0017750.1 mouse_genomes_project 10 145344477 145348946 - MGP_NODShiLtJ_P0027344 Rdh5 protein_coding protein_coding MGP_NODShiLtJ_T0024586.1 MGP_NODShiLtJ_G0016939.1 mouse_genomes_project 10 23581563 23594943 + MGP_NODShiLtJ_P0024586 Vnn3 protein_coding protein_coding MGP_NODShiLtJ_T0026945.1 MGP_NODShiLtJ_G0017620.1 mouse_genomes_project 10 132077851 132085962 - MGP_NODShiLtJ_P0026945 Lyz1 protein_coding protein_coding MGP_NODShiLtJ_T0003016.1 MGP_NODShiLtJ_G0002812.1 mouse_genomes_project 10 89984253 89985470 - Gm16315 antisense antisense MGP_NODShiLtJ_T0024545.1 MGP_NODShiLtJ_G0016927.1 mouse_genomes_project 10 20767565 20787743 + MGP_NODShiLtJ_P0024545 Aldh8a1 protein_coding protein_coding MGP_NODShiLtJ_T0024546.1 MGP_NODShiLtJ_G0016927.1 mouse_genomes_project 10 20767574 20776634 + Aldh8a1 protein_coding retained_intron MGP_NODShiLtJ_T0024547.1 MGP_NODShiLtJ_G0016927.1 mouse_genomes_project 10 20767621 20780026 + MGP_NODShiLtJ_P0024547 Aldh8a1 protein_coding protein_coding MGP_NODShiLtJ_T0024657.1 MGP_NODShiLtJ_G0016970.1 mouse_genomes_project 10 28389056 28973008 + MGP_NODShiLtJ_P0024657 Ptprk protein_coding protein_coding MGP_NODShiLtJ_T0024658.1 MGP_NODShiLtJ_G0016970.1 mouse_genomes_project 10 28389605 28972937 + MGP_NODShiLtJ_P0024658 Ptprk protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024659.1 MGP_NODShiLtJ_G0016970.1 mouse_genomes_project 10 28815675 28972937 + MGP_NODShiLtJ_P0024659 Ptprk protein_coding unknown_likely_coding MGP_NODShiLtJ_T0016999.1 MGP_NODShiLtJ_G0015006.1 mouse_genomes_project 10 67779809 67808894 - Gm28447 processed_transcript antisense MGP_NODShiLtJ_T0017000.1 MGP_NODShiLtJ_G0015006.1 mouse_genomes_project 10 67785699 67786676 - Gm28447 processed_transcript retained_intron MGP_NODShiLtJ_T0026662.1 MGP_NODShiLtJ_G0017512.1 mouse_genomes_project 10 103144623 103216311 - MGP_NODShiLtJ_P0026662 Elk3 protein_coding protein_coding MGP_NODShiLtJ_T0026663.1 MGP_NODShiLtJ_G0017512.1 mouse_genomes_project 10 103146507 103215980 - MGP_NODShiLtJ_P0026663 Elk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026664.1 MGP_NODShiLtJ_G0017512.1 mouse_genomes_project 10 103146507 103216145 - MGP_NODShiLtJ_P0026664 Elk3 protein_coding protein_coding MGP_NODShiLtJ_T0026665.1 MGP_NODShiLtJ_G0017512.1 mouse_genomes_project 10 103182835 103216311 - Elk3 protein_coding retained_intron MGP_NODShiLtJ_T0011160.1 MGP_NODShiLtJ_G0009293.1 mouse_genomes_project 10 45155078 45155402 - Gm25277 misc_RNA misc_RNA MGP_NODShiLtJ_T0024807.1 MGP_NODShiLtJ_G0017030.1 mouse_genomes_project 10 43167470 43305453 + MGP_NODShiLtJ_P0024807 Mettl24 protein_coding protein_coding MGP_NODShiLtJ_T0027221.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144361205 144368324 + MGP_NODShiLtJ_P0027221 Atp5b protein_coding protein_coding MGP_NODShiLtJ_T0027222.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144361238 144362019 + Atp5b protein_coding processed_transcript MGP_NODShiLtJ_T0027223.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144362365 144363882 + Atp5b protein_coding retained_intron MGP_NODShiLtJ_T0027224.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144363678 144368093 + Atp5b protein_coding retained_intron MGP_NODShiLtJ_T0027225.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144364162 144367085 + Atp5b protein_coding processed_transcript MGP_NODShiLtJ_T0027226.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144365613 144366984 + Atp5b protein_coding retained_intron MGP_NODShiLtJ_T0027227.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144366423 144367614 + Atp5b protein_coding retained_intron MGP_NODShiLtJ_T0027228.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144366484 144368206 + Atp5b protein_coding processed_transcript MGP_NODShiLtJ_T0027229.1 MGP_NODShiLtJ_G0017708.1 mouse_genomes_project 10 144366973 144368205 + Atp5b protein_coding processed_transcript MGP_NODShiLtJ_T0026771.1 MGP_NODShiLtJ_G0017556.1 mouse_genomes_project 10 111232551 111297220 - MGP_NODShiLtJ_P0026771 Tmtc3 protein_coding protein_coding MGP_NODShiLtJ_T0026772.1 MGP_NODShiLtJ_G0017556.1 mouse_genomes_project 10 111236250 111297217 - MGP_NODShiLtJ_P0026772 Tmtc3 protein_coding protein_coding MGP_NODShiLtJ_T0026773.1 MGP_NODShiLtJ_G0017556.1 mouse_genomes_project 10 111269174 111297209 - Tmtc3 protein_coding retained_intron MGP_NODShiLtJ_T0026774.1 MGP_NODShiLtJ_G0017556.1 mouse_genomes_project 10 111270397 111297137 - MGP_NODShiLtJ_P0026774 Tmtc3 protein_coding protein_coding MGP_NODShiLtJ_T0026775.1 MGP_NODShiLtJ_G0017556.1 mouse_genomes_project 10 111283309 111297196 - MGP_NODShiLtJ_P0026775 Tmtc3 protein_coding protein_coding MGP_NODShiLtJ_T0024484.1 MGP_NODShiLtJ_G0016907.1 mouse_genomes_project 10 17949068 17954205 - MGP_NODShiLtJ_P0024484 Gm4922 protein_coding protein_coding MGP_NODShiLtJ_T0024973.1 MGP_NODShiLtJ_G0017079.1 mouse_genomes_project 10 56685956 56686978 - MGP_NODShiLtJ_P0024973 4933411G06Rik protein_coding protein_coding MGP_NODShiLtJ_T0006104.1 MGP_NODShiLtJ_G0005092.1 mouse_genomes_project 10 145035713 145039883 + Gm26876 lincRNA lincRNA MGP_NODShiLtJ_T0026943.1 MGP_NODShiLtJ_G0017618.1 mouse_genomes_project 10 132014163 132016310 + MGP_NODShiLtJ_P0026943 Gm10936 protein_coding protein_coding MGP_NODShiLtJ_T0025819.1 MGP_NODShiLtJ_G0017305.1 mouse_genomes_project 10 88035233 88042678 - Plpp2 protein_coding processed_transcript MGP_NODShiLtJ_T0025820.1 MGP_NODShiLtJ_G0017305.1 mouse_genomes_project 10 88035935 88042611 - MGP_NODShiLtJ_P0025820 Plpp2 protein_coding protein_coding MGP_NODShiLtJ_T0025821.1 MGP_NODShiLtJ_G0017305.1 mouse_genomes_project 10 88036290 88042708 - MGP_NODShiLtJ_P0025821 Plpp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024854.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44310478 44339277 - MGP_NODShiLtJ_P0024854 Cep57l1 protein_coding protein_coding MGP_NODShiLtJ_T0024855.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44310479 44413409 - MGP_NODShiLtJ_P0024855 Cep57l1 protein_coding protein_coding MGP_NODShiLtJ_T0024856.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44310479 44413664 - MGP_NODShiLtJ_P0024856 Cep57l1 protein_coding protein_coding MGP_NODShiLtJ_T0024857.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44310484 44413403 - MGP_NODShiLtJ_P0024857 Cep57l1 protein_coding protein_coding MGP_NODShiLtJ_T0024858.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44310484 44413403 - MGP_NODShiLtJ_P0024858 Cep57l1 protein_coding protein_coding MGP_NODShiLtJ_T0024859.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44310863 44413667 - MGP_NODShiLtJ_P0024859 Cep57l1 protein_coding protein_coding MGP_NODShiLtJ_T0024860.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44311485 44413418 - MGP_NODShiLtJ_P0024860 Cep57l1 protein_coding protein_coding MGP_NODShiLtJ_T0024861.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44312811 44316252 - MGP_NODShiLtJ_P0024861 Cep57l1 protein_coding protein_coding MGP_NODShiLtJ_T0024862.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44318903 44322289 - Cep57l1 protein_coding retained_intron MGP_NODShiLtJ_T0024863.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44321864 44339984 - Cep57l1 protein_coding retained_intron MGP_NODShiLtJ_T0024864.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44336047 44413408 - Cep57l1 protein_coding retained_intron MGP_NODShiLtJ_T0024865.1 MGP_NODShiLtJ_G0017044.1 mouse_genomes_project 10 44338085 44413426 - Cep57l1 protein_coding retained_intron MGP_NODShiLtJ_T0025834.1 MGP_NODShiLtJ_G0017307.1 mouse_genomes_project 10 88085731 88097322 - MGP_NODShiLtJ_P0025834 Theg protein_coding protein_coding MGP_NODShiLtJ_T0025835.1 MGP_NODShiLtJ_G0017307.1 mouse_genomes_project 10 88085868 88089513 - Theg protein_coding retained_intron MGP_NODShiLtJ_T0025836.1 MGP_NODShiLtJ_G0017307.1 mouse_genomes_project 10 88085868 88097517 - MGP_NODShiLtJ_P0025836 Theg protein_coding protein_coding MGP_NODShiLtJ_T0098617.1 MGP_NODShiLtJ_G0037011.1 mouse_genomes_project 10 48176658 48176721 + Gm27723 snRNA snRNA MGP_NODShiLtJ_T0024968.1 MGP_NODShiLtJ_G0017076.1 mouse_genomes_project 10 56496590 56504966 - MGP_NODShiLtJ_P0024968 Fam162b protein_coding protein_coding MGP_NODShiLtJ_T0026459.1 MGP_NODShiLtJ_G0017466.1 mouse_genomes_project 10 95136964 95161944 - MGP_NODShiLtJ_P0026459 Prdm4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026460.1 MGP_NODShiLtJ_G0017466.1 mouse_genomes_project 10 95136964 95161955 - MGP_NODShiLtJ_P0026460 Prdm4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026461.1 MGP_NODShiLtJ_G0017466.1 mouse_genomes_project 10 95136973 95161841 - MGP_NODShiLtJ_P0026461 Prdm4 protein_coding protein_coding MGP_NODShiLtJ_T0027332.1 MGP_NODShiLtJ_G0017746.1 mouse_genomes_project 10 145230421 145245168 - MGP_NODShiLtJ_P0027332 Ormdl2 protein_coding protein_coding MGP_NODShiLtJ_T0026302.1 MGP_NODShiLtJ_G0017426.1 mouse_genomes_project 10 90274388 90281280 + MGP_NODShiLtJ_P0026302 Aes protein_coding protein_coding MGP_NODShiLtJ_T0024374.1 MGP_NODShiLtJ_G0016882.1 mouse_genomes_project 10 10914829 10939523 - MGP_NODShiLtJ_P0024374 Stx11 protein_coding protein_coding MGP_NODShiLtJ_T0024375.1 MGP_NODShiLtJ_G0016882.1 mouse_genomes_project 10 10914829 10939523 - MGP_NODShiLtJ_P0024375 Stx11 protein_coding protein_coding MGP_NODShiLtJ_T0027116.1 MGP_NODShiLtJ_G0017675.1 mouse_genomes_project 10 143444731 143463206 + MGP_NODShiLtJ_P0027116 Dctn2 protein_coding protein_coding MGP_NODShiLtJ_T0003003.1 MGP_NODShiLtJ_G0002803.1 mouse_genomes_project 10 84499979 84513072 + 1700094J05Rik antisense antisense MGP_NODShiLtJ_T0003004.1 MGP_NODShiLtJ_G0002803.1 mouse_genomes_project 10 84509552 84509920 + 1700094J05Rik antisense antisense MGP_NODShiLtJ_T0027073.1 MGP_NODShiLtJ_G0017660.1 mouse_genomes_project 10 143168027 143188765 - MGP_NODShiLtJ_P0027073 Tsfm protein_coding protein_coding MGP_NODShiLtJ_T0027074.1 MGP_NODShiLtJ_G0017660.1 mouse_genomes_project 10 143180293 143188802 - MGP_NODShiLtJ_P0027074 Tsfm protein_coding protein_coding MGP_NODShiLtJ_T0027075.1 MGP_NODShiLtJ_G0017660.1 mouse_genomes_project 10 143180409 143183059 - Tsfm protein_coding retained_intron MGP_NODShiLtJ_T0027076.1 MGP_NODShiLtJ_G0017660.1 mouse_genomes_project 10 143180587 143188353 - Tsfm protein_coding processed_transcript MGP_NODShiLtJ_T0027077.1 MGP_NODShiLtJ_G0017660.1 mouse_genomes_project 10 143180869 143188721 - Tsfm protein_coding retained_intron MGP_NODShiLtJ_T0027078.1 MGP_NODShiLtJ_G0017660.1 mouse_genomes_project 10 143182196 143188761 - MGP_NODShiLtJ_P0027078 Tsfm protein_coding protein_coding MGP_NODShiLtJ_T0027079.1 MGP_NODShiLtJ_G0017660.1 mouse_genomes_project 10 143187183 143188765 - Tsfm protein_coding retained_intron MGP_NODShiLtJ_T0026116.1 MGP_NODShiLtJ_G0017374.1 mouse_genomes_project 10 89298540 89310316 - MGP_NODShiLtJ_P0026116 Mknk2 protein_coding protein_coding MGP_NODShiLtJ_T0026117.1 MGP_NODShiLtJ_G0017374.1 mouse_genomes_project 10 89303145 89306457 - MGP_NODShiLtJ_P0026117 Mknk2 protein_coding protein_coding MGP_NODShiLtJ_T0026118.1 MGP_NODShiLtJ_G0017374.1 mouse_genomes_project 10 89305775 89306417 - MGP_NODShiLtJ_P0026118 Mknk2 protein_coding protein_coding MGP_NODShiLtJ_T0026119.1 MGP_NODShiLtJ_G0017374.1 mouse_genomes_project 10 89306111 89312278 - MGP_NODShiLtJ_P0026119 Mknk2 protein_coding protein_coding MGP_NODShiLtJ_T0009495.1 MGP_NODShiLtJ_G0007628.1 mouse_genomes_project 10 66262319 66262386 - Gm22117 miRNA miRNA MGP_NODShiLtJ_T0002969.1 MGP_NODShiLtJ_G0002776.1 mouse_genomes_project 10 20517810 20527683 + Gm26577 antisense antisense MGP_NODShiLtJ_T0027402.1 MGP_NODShiLtJ_G0017792.1 mouse_genomes_project 10 146371778 146372784 - MGP_NODShiLtJ_P0027402 Olfr810 protein_coding protein_coding MGP_NODShiLtJ_T0025882.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88383894 88389002 + protein_coding retained_intron MGP_NODShiLtJ_T0025883.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88383922 88393540 + protein_coding retained_intron MGP_NODShiLtJ_T0025884.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88383930 88388903 + protein_coding processed_transcript MGP_NODShiLtJ_T0025885.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88383941 88392714 + MGP_NODShiLtJ_P0025885 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025886.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88383954 88388304 + MGP_NODShiLtJ_P0025886 protein_coding protein_coding MGP_NODShiLtJ_T0025887.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88383956 88388334 + protein_coding processed_transcript MGP_NODShiLtJ_T0025888.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88383956 88388654 + MGP_NODShiLtJ_P0025888 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025889.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88384003 88394177 + MGP_NODShiLtJ_P0025889 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025890.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88384327 88388386 + MGP_NODShiLtJ_P0025890 protein_coding protein_coding MGP_NODShiLtJ_T0025891.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88388061 88388677 + MGP_NODShiLtJ_P0025891 protein_coding protein_coding MGP_NODShiLtJ_T0025892.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88388283 88389415 + protein_coding retained_intron MGP_NODShiLtJ_T0025893.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88388939 88392343 + MGP_NODShiLtJ_P0025893 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025895.1 MGP_NODShiLtJ_G0017324.1 mouse_genomes_project 10 88391027 88392340 + protein_coding retained_intron MGP_NODShiLtJ_T0003026.1 MGP_NODShiLtJ_G0002821.1 mouse_genomes_project 10 96205092 96206345 + Gm16280 antisense antisense MGP_NODShiLtJ_T0006049.1 MGP_NODShiLtJ_G0005059.1 mouse_genomes_project 10 86152355 86155053 + 1700009J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0006050.1 MGP_NODShiLtJ_G0005059.1 mouse_genomes_project 10 86152358 86155050 + 1700009J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0006051.1 MGP_NODShiLtJ_G0005059.1 mouse_genomes_project 10 86152366 86153450 + 1700009J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0024678.1 MGP_NODShiLtJ_G0016977.1 mouse_genomes_project 10 29820846 29839037 - MGP_NODShiLtJ_P0024678 Rnf146 protein_coding protein_coding MGP_NODShiLtJ_T0024679.1 MGP_NODShiLtJ_G0016977.1 mouse_genomes_project 10 29822839 29839037 - MGP_NODShiLtJ_P0024679 Rnf146 protein_coding protein_coding MGP_NODShiLtJ_T0024680.1 MGP_NODShiLtJ_G0016977.1 mouse_genomes_project 10 29822844 29838635 - MGP_NODShiLtJ_P0024680 Rnf146 protein_coding protein_coding MGP_NODShiLtJ_T0024681.1 MGP_NODShiLtJ_G0016977.1 mouse_genomes_project 10 29823326 29834382 - MGP_NODShiLtJ_P0024681 Rnf146 protein_coding protein_coding MGP_NODShiLtJ_T0024682.1 MGP_NODShiLtJ_G0016977.1 mouse_genomes_project 10 29823887 29838618 - MGP_NODShiLtJ_P0024682 Rnf146 protein_coding protein_coding MGP_NODShiLtJ_T0025435.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 77954748 77997389 - MGP_NODShiLtJ_P0025435 Phyhipl protein_coding protein_coding MGP_NODShiLtJ_T0025436.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 77955204 78063661 - MGP_NODShiLtJ_P0025436 Phyhipl protein_coding protein_coding MGP_NODShiLtJ_T0025437.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 77959367 77997364 - Phyhipl protein_coding retained_intron MGP_NODShiLtJ_T0025438.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 77963323 77997572 - Phyhipl protein_coding retained_intron MGP_NODShiLtJ_T0025439.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 77966424 78063668 - MGP_NODShiLtJ_P0025439 Phyhipl protein_coding protein_coding MGP_NODShiLtJ_T0025440.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 77999331 78058276 - Phyhipl protein_coding processed_transcript MGP_NODShiLtJ_T0025441.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 77999415 78063666 - Phyhipl protein_coding processed_transcript MGP_NODShiLtJ_T0025442.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 78008815 78009290 - Phyhipl protein_coding processed_transcript MGP_NODShiLtJ_T0025443.1 MGP_NODShiLtJ_G0017198.1 mouse_genomes_project 10 78009325 78028037 - Phyhipl protein_coding processed_transcript MGP_NODShiLtJ_T0099883.1 MGP_NODShiLtJ_G0038277.1 mouse_genomes_project 10 124468739 124468861 - Gm22186 snoRNA snoRNA MGP_NODShiLtJ_T0025751.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025751 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025752.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025752 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025753.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025753 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025754.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025754 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025755.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314944 - MGP_NODShiLtJ_P0025755 Aire protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025756.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025756 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025757.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025757 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025758.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025758 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025759.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314906 - MGP_NODShiLtJ_P0025759 Aire protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025760.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025760 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025761.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025761 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025762.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025762 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025763.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299933 86314914 - MGP_NODShiLtJ_P0025763 Aire protein_coding protein_coding MGP_NODShiLtJ_T0025764.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86299967 86307531 - Aire protein_coding retained_intron MGP_NODShiLtJ_T0025765.1 MGP_NODShiLtJ_G0017276.1 mouse_genomes_project 10 86305621 86313051 - Aire protein_coding retained_intron MGP_NODShiLtJ_T0026634.1 MGP_NODShiLtJ_G0017507.1 mouse_genomes_project 10 100863969 100871476 - MGP_NODShiLtJ_P0026634 Slc25a3 protein_coding protein_coding MGP_NODShiLtJ_T0026635.1 MGP_NODShiLtJ_G0017507.1 mouse_genomes_project 10 100864186 100871374 - MGP_NODShiLtJ_P0026635 Slc25a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026636.1 MGP_NODShiLtJ_G0017507.1 mouse_genomes_project 10 100864187 100871420 - MGP_NODShiLtJ_P0026636 Slc25a3 protein_coding protein_coding MGP_NODShiLtJ_T0026637.1 MGP_NODShiLtJ_G0017507.1 mouse_genomes_project 10 100864203 100871372 - MGP_NODShiLtJ_P0026637 Slc25a3 protein_coding protein_coding MGP_NODShiLtJ_T0026638.1 MGP_NODShiLtJ_G0017507.1 mouse_genomes_project 10 100864406 100867254 - Slc25a3 protein_coding retained_intron MGP_NODShiLtJ_T0026639.1 MGP_NODShiLtJ_G0017507.1 mouse_genomes_project 10 100865568 100868142 - Slc25a3 protein_coding processed_transcript MGP_NODShiLtJ_T0026640.1 MGP_NODShiLtJ_G0017507.1 mouse_genomes_project 10 100865594 100869640 - Slc25a3 protein_coding retained_intron MGP_NODShiLtJ_T0026641.1 MGP_NODShiLtJ_G0017507.1 mouse_genomes_project 10 100867191 100871439 - Slc25a3 protein_coding retained_intron MGP_NODShiLtJ_T0009508.1 MGP_NODShiLtJ_G0007641.1 mouse_genomes_project 10 86767744 86767807 - Mir6908 miRNA miRNA MGP_NODShiLtJ_T0027366.1 MGP_NODShiLtJ_G0017765.1 mouse_genomes_project 10 145721694 145722633 + MGP_NODShiLtJ_P0027366 Olfr776 protein_coding protein_coding MGP_NODShiLtJ_T0026881.1 MGP_NODShiLtJ_G0017593.1 mouse_genomes_project 10 126850153 126861609 + MGP_NODShiLtJ_P0026881 Gm26596 protein_coding protein_coding MGP_NODShiLtJ_T0027414.1 MGP_NODShiLtJ_G0017802.1 mouse_genomes_project 10 146770790 146771732 + MGP_NODShiLtJ_P0027414 Olfr822 protein_coding protein_coding MGP_NODShiLtJ_T0006037.1 MGP_NODShiLtJ_G0005051.1 mouse_genomes_project 10 71739414 71740256 - Gm28881 lincRNA lincRNA MGP_NODShiLtJ_T0025730.1 MGP_NODShiLtJ_G0017272.1 mouse_genomes_project 10 86156513 86163052 - MGP_NODShiLtJ_P0025730 Lrrc3 protein_coding protein_coding MGP_NODShiLtJ_T0025631.1 MGP_NODShiLtJ_G0017244.1 mouse_genomes_project 10 84653628 84657595 + Lss protein_coding processed_transcript MGP_NODShiLtJ_T0025632.1 MGP_NODShiLtJ_G0017244.1 mouse_genomes_project 10 84653647 84670903 + Lss protein_coding retained_intron MGP_NODShiLtJ_T0025633.1 MGP_NODShiLtJ_G0017244.1 mouse_genomes_project 10 84653647 84677514 + MGP_NODShiLtJ_P0025633 Lss protein_coding protein_coding MGP_NODShiLtJ_T0025634.1 MGP_NODShiLtJ_G0017244.1 mouse_genomes_project 10 84653652 84679173 + Lss protein_coding retained_intron MGP_NODShiLtJ_T0025635.1 MGP_NODShiLtJ_G0017244.1 mouse_genomes_project 10 84653722 84657750 + Lss protein_coding retained_intron MGP_NODShiLtJ_T0025636.1 MGP_NODShiLtJ_G0017244.1 mouse_genomes_project 10 84663916 84664781 + MGP_NODShiLtJ_P0025636 Lss protein_coding protein_coding MGP_NODShiLtJ_T0025637.1 MGP_NODShiLtJ_G0017244.1 mouse_genomes_project 10 84673244 84678653 + Lss protein_coding retained_intron MGP_NODShiLtJ_T0025638.1 MGP_NODShiLtJ_G0017244.1 mouse_genomes_project 10 84674305 84675268 + Lss protein_coding retained_intron MGP_NODShiLtJ_T0025363.1 MGP_NODShiLtJ_G0017192.1 mouse_genomes_project 10 76479641 76488595 - MGP_NODShiLtJ_P0025363 A930033H14Rik protein_coding protein_coding MGP_NODShiLtJ_T0025868.1 MGP_NODShiLtJ_G0017318.1 mouse_genomes_project 10 88276138 88277981 + MGP_NODShiLtJ_P0025868 Fgf22 protein_coding protein_coding MGP_NODShiLtJ_T0006046.1 MGP_NODShiLtJ_G0005056.1 mouse_genomes_project 10 78781722 78784947 + Gm20609 lincRNA lincRNA MGP_NODShiLtJ_T0026007.1 MGP_NODShiLtJ_G0017349.1 mouse_genomes_project 10 88739549 88751059 + MGP_NODShiLtJ_P0026007 Efna2 protein_coding protein_coding MGP_NODShiLtJ_T0016981.1 MGP_NODShiLtJ_G0015003.1 mouse_genomes_project 10 39122947 39126935 + 5930403N24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0016982.1 MGP_NODShiLtJ_G0015003.1 mouse_genomes_project 10 39123103 39125248 + 5930403N24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0016983.1 MGP_NODShiLtJ_G0015003.1 mouse_genomes_project 10 39123459 39134867 + 5930403N24Rik processed_transcript lincRNA MGP_NODShiLtJ_T0002963.1 MGP_NODShiLtJ_G0002771.1 mouse_genomes_project 10 9028114 9028814 - Gm16577 antisense antisense MGP_NODShiLtJ_T0012271.1 MGP_NODShiLtJ_G0010379.1 mouse_genomes_project 10 20666006 20667016 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000796.1 MGP_NODShiLtJ_G0000727.1 mouse_genomes_project 10 42645213 42648438 - TEC TEC MGP_NODShiLtJ_T0025324.1 MGP_NODShiLtJ_G0017180.1 mouse_genomes_project 10 74029239 74150246 - MGP_NODShiLtJ_P0025324 Reep3 protein_coding protein_coding MGP_NODShiLtJ_T0026747.1 MGP_NODShiLtJ_G0017541.1 mouse_genomes_project 10 107969201 107975685 + MGP_NODShiLtJ_P0026747 Kera protein_coding protein_coding MGP_NODShiLtJ_T0012298.1 MGP_NODShiLtJ_G0010406.1 mouse_genomes_project 10 69277821 69278447 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025791.1 MGP_NODShiLtJ_G0017285.1 mouse_genomes_project 10 86759453 86787519 - MGP_NODShiLtJ_P0025791 Pdxk protein_coding protein_coding MGP_NODShiLtJ_T0024569.1 MGP_NODShiLtJ_G0016933.1 mouse_genomes_project 10 22296115 22356155 + MGP_NODShiLtJ_P0024569 Slc2a12 protein_coding protein_coding MGP_NODShiLtJ_T0024570.1 MGP_NODShiLtJ_G0016933.1 mouse_genomes_project 10 22300114 22316293 + Slc2a12 protein_coding processed_transcript MGP_NODShiLtJ_T0012299.1 MGP_NODShiLtJ_G0010407.1 mouse_genomes_project 10 74336844 74355420 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101535.1 MGP_NODShiLtJ_G0039705.1 mouse_genomes_project 10 146134466 146134881 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098655.1 MGP_NODShiLtJ_G0037049.1 mouse_genomes_project 10 126861877 126862037 + Gm22507 snRNA snRNA MGP_NODShiLtJ_T0006031.1 MGP_NODShiLtJ_G0005045.1 mouse_genomes_project 10 63283937 63292953 - 4930467K11Rik lincRNA lincRNA MGP_NODShiLtJ_T0003052.1 MGP_NODShiLtJ_G0002837.1 mouse_genomes_project 10 135543373 135546597 + 9230105E05Rik antisense antisense MGP_NODShiLtJ_T0025092.1 MGP_NODShiLtJ_G0017121.1 mouse_genomes_project 10 65864844 65884911 + MGP_NODShiLtJ_P0025092 Dnajb12 protein_coding protein_coding MGP_NODShiLtJ_T0025093.1 MGP_NODShiLtJ_G0017121.1 mouse_genomes_project 10 65864852 65883303 + MGP_NODShiLtJ_P0025093 Dnajb12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025094.1 MGP_NODShiLtJ_G0017121.1 mouse_genomes_project 10 65864863 65884905 + MGP_NODShiLtJ_P0025094 Dnajb12 protein_coding protein_coding MGP_NODShiLtJ_T0025095.1 MGP_NODShiLtJ_G0017121.1 mouse_genomes_project 10 65864906 65882064 + MGP_NODShiLtJ_P0025095 Dnajb12 protein_coding protein_coding MGP_NODShiLtJ_T0025096.1 MGP_NODShiLtJ_G0017121.1 mouse_genomes_project 10 65864914 65883810 + MGP_NODShiLtJ_P0025096 Dnajb12 protein_coding protein_coding MGP_NODShiLtJ_T0027380.1 MGP_NODShiLtJ_G0017776.1 mouse_genomes_project 10 145978916 145981074 + MGP_NODShiLtJ_P0027380 protein_coding protein_coding MGP_NODShiLtJ_T0024324.1 MGP_NODShiLtJ_G0016867.1 mouse_genomes_project 10 5290674 5335408 + MGP_NODShiLtJ_P0024324 Zc3h12d protein_coding protein_coding MGP_NODShiLtJ_T0025609.1 MGP_NODShiLtJ_G0017236.1 mouse_genomes_project 10 84241138 84284772 + MGP_NODShiLtJ_P0025609 Slc5a4a protein_coding protein_coding MGP_NODShiLtJ_T0012321.1 MGP_NODShiLtJ_G0010429.1 mouse_genomes_project 10 113888887 113889832 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026155.1 MGP_NODShiLtJ_G0017391.1 mouse_genomes_project 10 89596057 89667294 - MGP_NODShiLtJ_P0026155 Gng7 protein_coding protein_coding MGP_NODShiLtJ_T0026156.1 MGP_NODShiLtJ_G0017391.1 mouse_genomes_project 10 89596057 89645336 - MGP_NODShiLtJ_P0026156 Gng7 protein_coding protein_coding MGP_NODShiLtJ_T0026157.1 MGP_NODShiLtJ_G0017391.1 mouse_genomes_project 10 89596057 89667274 - MGP_NODShiLtJ_P0026157 Gng7 protein_coding protein_coding MGP_NODShiLtJ_T0026158.1 MGP_NODShiLtJ_G0017391.1 mouse_genomes_project 10 89596062 89645349 - MGP_NODShiLtJ_P0026158 Gng7 protein_coding protein_coding MGP_NODShiLtJ_T0026159.1 MGP_NODShiLtJ_G0017391.1 mouse_genomes_project 10 89598620 89642167 - MGP_NODShiLtJ_P0026159 Gng7 protein_coding protein_coding MGP_NODShiLtJ_T0026160.1 MGP_NODShiLtJ_G0017391.1 mouse_genomes_project 10 89599145 89667262 - MGP_NODShiLtJ_P0026160 Gng7 protein_coding protein_coding MGP_NODShiLtJ_T0025177.1 MGP_NODShiLtJ_G0017143.1 mouse_genomes_project 10 67791581 67828761 + MGP_NODShiLtJ_P0025177 Npffr1 protein_coding protein_coding MGP_NODShiLtJ_T0098656.1 MGP_NODShiLtJ_G0037050.1 mouse_genomes_project 10 129486268 129486375 + Gm22070 snRNA snRNA MGP_NODShiLtJ_T0026887.1 MGP_NODShiLtJ_G0017596.1 mouse_genomes_project 10 129705566 129763612 - MGP_NODShiLtJ_P0026887 Tbc1d15 protein_coding protein_coding MGP_NODShiLtJ_T0026511.1 MGP_NODShiLtJ_G0017483.1 mouse_genomes_project 10 97218490 97293793 + MGP_NODShiLtJ_P0026511 Igf1 protein_coding protein_coding MGP_NODShiLtJ_T0026512.1 MGP_NODShiLtJ_G0017483.1 mouse_genomes_project 10 97219290 97299946 + MGP_NODShiLtJ_P0026512 Igf1 protein_coding protein_coding MGP_NODShiLtJ_T0026513.1 MGP_NODShiLtJ_G0017483.1 mouse_genomes_project 10 97219480 97294699 + MGP_NODShiLtJ_P0026513 Igf1 protein_coding protein_coding MGP_NODShiLtJ_T0026514.1 MGP_NODShiLtJ_G0017483.1 mouse_genomes_project 10 97219712 97293791 + MGP_NODShiLtJ_P0026514 Igf1 protein_coding protein_coding MGP_NODShiLtJ_T0026515.1 MGP_NODShiLtJ_G0017483.1 mouse_genomes_project 10 97219833 97278149 + MGP_NODShiLtJ_P0026515 Igf1 protein_coding protein_coding MGP_NODShiLtJ_T0026516.1 MGP_NODShiLtJ_G0017483.1 mouse_genomes_project 10 97220252 97278694 + MGP_NODShiLtJ_P0026516 Igf1 protein_coding protein_coding MGP_NODShiLtJ_T0026517.1 MGP_NODShiLtJ_G0017483.1 mouse_genomes_project 10 97220828 97293797 + MGP_NODShiLtJ_P0026517 Igf1 protein_coding protein_coding MGP_NODShiLtJ_T0026518.1 MGP_NODShiLtJ_G0017483.1 mouse_genomes_project 10 97221551 97293775 + MGP_NODShiLtJ_P0026518 Igf1 protein_coding protein_coding MGP_NODShiLtJ_T0024542.1 MGP_NODShiLtJ_G0016925.1 mouse_genomes_project 10 20673037 20759158 + MGP_NODShiLtJ_P0024542 protein_coding protein_coding MGP_NODShiLtJ_T0024543.1 MGP_NODShiLtJ_G0016925.1 mouse_genomes_project 10 20673037 20691697 + MGP_NODShiLtJ_P0024543 protein_coding protein_coding MGP_NODShiLtJ_T0025049.1 MGP_NODShiLtJ_G0017106.1 mouse_genomes_project 10 64209864 64318836 + MGP_NODShiLtJ_P0025049 Lims1 protein_coding protein_coding MGP_NODShiLtJ_T0025050.1 MGP_NODShiLtJ_G0017106.1 mouse_genomes_project 10 64285522 64315928 + MGP_NODShiLtJ_P0025050 Lims1 protein_coding protein_coding MGP_NODShiLtJ_T0025051.1 MGP_NODShiLtJ_G0017106.1 mouse_genomes_project 10 64285537 64315723 + MGP_NODShiLtJ_P0025051 Lims1 protein_coding protein_coding MGP_NODShiLtJ_T0025052.1 MGP_NODShiLtJ_G0017106.1 mouse_genomes_project 10 64299964 64302244 + Lims1 protein_coding processed_transcript MGP_NODShiLtJ_T0025053.1 MGP_NODShiLtJ_G0017106.1 mouse_genomes_project 10 64310802 64315809 + Lims1 protein_coding processed_transcript MGP_NODShiLtJ_T0098659.1 MGP_NODShiLtJ_G0037053.1 mouse_genomes_project 10 143626243 143626352 - Gm23819 snRNA snRNA MGP_NODShiLtJ_T0026395.1 MGP_NODShiLtJ_G0017444.1 mouse_genomes_project 10 91782275 91821641 + MGP_NODShiLtJ_P0026395 protein_coding protein_coding MGP_NODShiLtJ_T0098622.1 MGP_NODShiLtJ_G0037016.1 mouse_genomes_project 10 57926920 57927027 + Gm25664 snRNA snRNA MGP_NODShiLtJ_T0098598.1 MGP_NODShiLtJ_G0036992.1 mouse_genomes_project 10 1063397 1063554 + Gm25515 snRNA snRNA MGP_NODShiLtJ_T0026828.1 MGP_NODShiLtJ_G0017572.1 mouse_genomes_project 10 120425152 120427857 - MGP_NODShiLtJ_P0026828 Myf6 protein_coding protein_coding MGP_NODShiLtJ_T0012291.1 MGP_NODShiLtJ_G0010399.1 mouse_genomes_project 10 57367300 57367735 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026891.1 MGP_NODShiLtJ_G0017600.1 mouse_genomes_project 10 129907171 129957775 + MGP_NODShiLtJ_P0026891 Zfc3h1 protein_coding protein_coding MGP_NODShiLtJ_T0026892.1 MGP_NODShiLtJ_G0017600.1 mouse_genomes_project 10 129952417 129957774 + Zfc3h1 protein_coding retained_intron MGP_NODShiLtJ_T0026893.1 MGP_NODShiLtJ_G0017600.1 mouse_genomes_project 10 129953619 129955877 + Zfc3h1 protein_coding retained_intron MGP_NODShiLtJ_T0026894.1 MGP_NODShiLtJ_G0017600.1 mouse_genomes_project 10 129956081 129956765 + Zfc3h1 protein_coding retained_intron MGP_NODShiLtJ_T0012332.1 MGP_NODShiLtJ_G0010440.1 mouse_genomes_project 10 146838191 146839162 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026429.1 MGP_NODShiLtJ_G0017454.1 mouse_genomes_project 10 93595235 93602819 - MGP_NODShiLtJ_P0026429 Ckap4 protein_coding protein_coding MGP_NODShiLtJ_T0026430.1 MGP_NODShiLtJ_G0017454.1 mouse_genomes_project 10 93595566 93602967 - MGP_NODShiLtJ_P0026430 Ckap4 protein_coding protein_coding MGP_NODShiLtJ_T0026396.1 MGP_NODShiLtJ_G0017445.1 mouse_genomes_project 10 91880357 91882230 + MGP_NODShiLtJ_P0026396 Gm4799 protein_coding protein_coding MGP_NODShiLtJ_T0027023.1 MGP_NODShiLtJ_G0017641.1 mouse_genomes_project 10 136283367 136357365 + MGP_NODShiLtJ_P0027023 Wif1 protein_coding protein_coding MGP_NODShiLtJ_T0027024.1 MGP_NODShiLtJ_G0017641.1 mouse_genomes_project 10 136283431 136357361 + MGP_NODShiLtJ_P0027024 Wif1 protein_coding protein_coding MGP_NODShiLtJ_T0027025.1 MGP_NODShiLtJ_G0017641.1 mouse_genomes_project 10 136339732 136357352 + Wif1 protein_coding retained_intron MGP_NODShiLtJ_T0025948.1 MGP_NODShiLtJ_G0017340.1 mouse_genomes_project 10 88581803 88583040 - Polr2e protein_coding retained_intron MGP_NODShiLtJ_T0025949.1 MGP_NODShiLtJ_G0017340.1 mouse_genomes_project 10 88581803 88585565 - Polr2e protein_coding retained_intron MGP_NODShiLtJ_T0025950.1 MGP_NODShiLtJ_G0017340.1 mouse_genomes_project 10 88581803 88585650 - MGP_NODShiLtJ_P0025950 Polr2e protein_coding protein_coding MGP_NODShiLtJ_T0025951.1 MGP_NODShiLtJ_G0017340.1 mouse_genomes_project 10 88581805 88585505 - Polr2e protein_coding retained_intron MGP_NODShiLtJ_T0025952.1 MGP_NODShiLtJ_G0017340.1 mouse_genomes_project 10 88582029 88585556 - Polr2e protein_coding retained_intron MGP_NODShiLtJ_T0099879.1 MGP_NODShiLtJ_G0038273.1 mouse_genomes_project 10 118567816 118567938 - Gm25342 snoRNA snoRNA MGP_NODShiLtJ_T0027027.1 MGP_NODShiLtJ_G0017643.1 mouse_genomes_project 10 136647509 136680013 + MGP_NODShiLtJ_P0027027 Gns protein_coding protein_coding MGP_NODShiLtJ_T0026101.1 MGP_NODShiLtJ_G0017369.1 mouse_genomes_project 10 89206877 89214673 - MGP_NODShiLtJ_P0026101 Abhd17a protein_coding protein_coding MGP_NODShiLtJ_T0026102.1 MGP_NODShiLtJ_G0017369.1 mouse_genomes_project 10 89206878 89214656 - MGP_NODShiLtJ_P0026102 Abhd17a protein_coding protein_coding MGP_NODShiLtJ_T0026103.1 MGP_NODShiLtJ_G0017369.1 mouse_genomes_project 10 89206879 89209848 - MGP_NODShiLtJ_P0026103 Abhd17a protein_coding protein_coding MGP_NODShiLtJ_T0026104.1 MGP_NODShiLtJ_G0017369.1 mouse_genomes_project 10 89209902 89214647 - MGP_NODShiLtJ_P0026104 Abhd17a protein_coding protein_coding MGP_NODShiLtJ_T0003025.1 MGP_NODShiLtJ_G0002820.1 mouse_genomes_project 10 96130463 96165675 + Gm16268 antisense antisense MGP_NODShiLtJ_T0026647.1 MGP_NODShiLtJ_G0017509.1 mouse_genomes_project 10 102541240 102581444 - MGP_NODShiLtJ_P0026647 Nedd1 protein_coding protein_coding MGP_NODShiLtJ_T0027395.1 MGP_NODShiLtJ_G0017787.1 mouse_genomes_project 10 146324313 146325310 - MGP_NODShiLtJ_P0027395 Olfr807 protein_coding protein_coding MGP_NODShiLtJ_T0006029.1 MGP_NODShiLtJ_G0005043.1 mouse_genomes_project 10 45459906 45461946 - Gm26860 lincRNA lincRNA MGP_NODShiLtJ_T0025801.1 MGP_NODShiLtJ_G0017293.1 mouse_genomes_project 10 87207909 87208872 - MGP_NODShiLtJ_P0025801 Olfr1356 protein_coding protein_coding MGP_NODShiLtJ_T0025802.1 MGP_NODShiLtJ_G0017293.1 mouse_genomes_project 10 87207909 87213130 - MGP_NODShiLtJ_P0025802 Olfr1356 protein_coding protein_coding MGP_NODShiLtJ_T0024231.1 MGP_NODShiLtJ_G0016850.1 mouse_genomes_project 10 2134800 2137584 + MGP_NODShiLtJ_P0024231 Gm10097 protein_coding protein_coding MGP_NODShiLtJ_T0009504.1 MGP_NODShiLtJ_G0007637.1 mouse_genomes_project 10 85855981 85856065 + Mir1930 miRNA miRNA MGP_NODShiLtJ_T0099875.1 MGP_NODShiLtJ_G0038269.1 mouse_genomes_project 10 108161879 108162007 - Gm25658 snoRNA snoRNA MGP_NODShiLtJ_T0027378.1 MGP_NODShiLtJ_G0017774.1 mouse_genomes_project 10 145953611 145954547 + MGP_NODShiLtJ_P0027378 Olfr788 protein_coding protein_coding MGP_NODShiLtJ_T0099871.1 MGP_NODShiLtJ_G0038265.1 mouse_genomes_project 10 100865686 100865932 - Gm24119 snoRNA snoRNA MGP_NODShiLtJ_T0000802.1 MGP_NODShiLtJ_G0000733.1 mouse_genomes_project 10 93105025 93105495 + TEC TEC MGP_NODShiLtJ_T0027400.1 MGP_NODShiLtJ_G0017790.1 mouse_genomes_project 10 146350095 146351082 + MGP_NODShiLtJ_P0027400 protein_coding protein_coding MGP_NODShiLtJ_T0027407.1 MGP_NODShiLtJ_G0017796.1 mouse_genomes_project 10 146554450 146555722 - MGP_NODShiLtJ_P0027407 protein_coding protein_coding MGP_NODShiLtJ_T0027165.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143763305 143847159 - MGP_NODShiLtJ_P0027165 Lrp1 protein_coding protein_coding MGP_NODShiLtJ_T0027166.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143763743 143764747 - Lrp1 protein_coding retained_intron MGP_NODShiLtJ_T0027167.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143764379 143765292 - Lrp1 protein_coding retained_intron MGP_NODShiLtJ_T0027168.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143767344 143768357 - Lrp1 protein_coding retained_intron MGP_NODShiLtJ_T0027169.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143771538 143775073 - MGP_NODShiLtJ_P0027169 Lrp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027170.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143803264 143806821 - Lrp1 protein_coding retained_intron MGP_NODShiLtJ_T0027171.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143806664 143808396 - MGP_NODShiLtJ_P0027171 Lrp1 protein_coding protein_coding MGP_NODShiLtJ_T0027172.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143813280 143847159 - Lrp1 protein_coding retained_intron MGP_NODShiLtJ_T0027173.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143814809 143846981 - MGP_NODShiLtJ_P0027173 Lrp1 protein_coding protein_coding MGP_NODShiLtJ_T0027174.1 MGP_NODShiLtJ_G0017688.1 mouse_genomes_project 10 143825872 143846933 - MGP_NODShiLtJ_P0027174 Lrp1 protein_coding protein_coding MGP_NODShiLtJ_T0027406.1 MGP_NODShiLtJ_G0017795.1 mouse_genomes_project 10 146554450 146555740 - MGP_NODShiLtJ_P0027406 protein_coding protein_coding MGP_NODShiLtJ_T0026940.1 MGP_NODShiLtJ_G0017616.1 mouse_genomes_project 10 131979756 131990014 - MGP_NODShiLtJ_P0026940 Yeats4 protein_coding protein_coding MGP_NODShiLtJ_T0099839.1 MGP_NODShiLtJ_G0038233.1 mouse_genomes_project 10 13203063 13203193 + Gm23892 snoRNA snoRNA MGP_NODShiLtJ_T0024233.1 MGP_NODShiLtJ_G0016851.1 mouse_genomes_project 10 2697006 2709345 + MGP_NODShiLtJ_P0024233 Myct1 protein_coding protein_coding MGP_NODShiLtJ_T0027134.1 MGP_NODShiLtJ_G0017680.1 mouse_genomes_project 10 143514275 143526118 - MGP_NODShiLtJ_P0027134 Gli1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024237.1 MGP_NODShiLtJ_G0016854.1 mouse_genomes_project 10 2932525 2945984 - MGP_NODShiLtJ_P0024237 Mtrf1l protein_coding protein_coding MGP_NODShiLtJ_T0024238.1 MGP_NODShiLtJ_G0016854.1 mouse_genomes_project 10 2933856 2937709 - Mtrf1l protein_coding processed_transcript MGP_NODShiLtJ_T0024239.1 MGP_NODShiLtJ_G0016854.1 mouse_genomes_project 10 2941007 2945620 - Mtrf1l protein_coding processed_transcript MGP_NODShiLtJ_T0012273.1 MGP_NODShiLtJ_G0010381.1 mouse_genomes_project 10 21578483 21579423 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024969.1 MGP_NODShiLtJ_G0017077.1 mouse_genomes_project 10 56528103 56546132 - MGP_NODShiLtJ_P0024969 Gprc6a protein_coding protein_coding MGP_NODShiLtJ_T0026706.1 MGP_NODShiLtJ_G0017523.1 mouse_genomes_project 10 103993421 104110538 + MGP_NODShiLtJ_P0026706 Fgd6 protein_coding protein_coding MGP_NODShiLtJ_T0026707.1 MGP_NODShiLtJ_G0017523.1 mouse_genomes_project 10 104033212 104052729 + Fgd6 protein_coding processed_transcript MGP_NODShiLtJ_T0026708.1 MGP_NODShiLtJ_G0017523.1 mouse_genomes_project 10 104098106 104105037 + Fgd6 protein_coding retained_intron MGP_NODShiLtJ_T0003039.1 MGP_NODShiLtJ_G0002829.1 mouse_genomes_project 10 129243490 129270857 + 4930473D10Rik antisense antisense MGP_NODShiLtJ_T0027403.1 MGP_NODShiLtJ_G0017793.1 mouse_genomes_project 10 146390588 146391548 - MGP_NODShiLtJ_P0027403 Olfr811 protein_coding protein_coding MGP_NODShiLtJ_T0003007.1 MGP_NODShiLtJ_G0002806.1 mouse_genomes_project 10 88854095 88854658 - Gm15122 antisense antisense MGP_NODShiLtJ_T0003050.1 MGP_NODShiLtJ_G0002836.1 mouse_genomes_project 10 134906977 134936561 - Grip1os1 antisense antisense MGP_NODShiLtJ_T0003051.1 MGP_NODShiLtJ_G0002836.1 mouse_genomes_project 10 134931343 134936448 - Grip1os1 antisense antisense MGP_NODShiLtJ_T0025017.1 MGP_NODShiLtJ_G0017099.1 mouse_genomes_project 10 63292984 63319700 + MGP_NODShiLtJ_P0025017 Hsf2 protein_coding protein_coding MGP_NODShiLtJ_T0003019.1 MGP_NODShiLtJ_G0002815.1 mouse_genomes_project 10 90290726 90295283 - Gm15917 antisense antisense MGP_NODShiLtJ_T0025731.1 MGP_NODShiLtJ_G0017273.1 mouse_genomes_project 10 86169829 86231224 - MGP_NODShiLtJ_P0025731 Trpm2 protein_coding protein_coding MGP_NODShiLtJ_T0025732.1 MGP_NODShiLtJ_G0017273.1 mouse_genomes_project 10 86171272 86228831 - Trpm2 protein_coding processed_transcript MGP_NODShiLtJ_T0025733.1 MGP_NODShiLtJ_G0017273.1 mouse_genomes_project 10 86171410 86193880 - Trpm2 protein_coding retained_intron MGP_NODShiLtJ_T0025734.1 MGP_NODShiLtJ_G0017273.1 mouse_genomes_project 10 86171468 86196432 - Trpm2 protein_coding retained_intron MGP_NODShiLtJ_T0025735.1 MGP_NODShiLtJ_G0017273.1 mouse_genomes_project 10 86178165 86182916 - Trpm2 protein_coding retained_intron MGP_NODShiLtJ_T0025736.1 MGP_NODShiLtJ_G0017273.1 mouse_genomes_project 10 86179396 86201438 - Trpm2 protein_coding retained_intron MGP_NODShiLtJ_T0025737.1 MGP_NODShiLtJ_G0017273.1 mouse_genomes_project 10 86224163 86231174 - MGP_NODShiLtJ_P0025737 Trpm2 protein_coding protein_coding MGP_NODShiLtJ_T0025738.1 MGP_NODShiLtJ_G0017273.1 mouse_genomes_project 10 86228418 86231933 - Trpm2 protein_coding processed_transcript MGP_NODShiLtJ_T0025696.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85791306 85811063 + MGP_NODShiLtJ_P0025696 Pttg1ip protein_coding protein_coding MGP_NODShiLtJ_T0025697.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85791342 85799760 + Pttg1ip protein_coding retained_intron MGP_NODShiLtJ_T0025698.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85791344 85806230 + MGP_NODShiLtJ_P0025698 Pttg1ip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025699.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85791389 85809666 + MGP_NODShiLtJ_P0025699 Pttg1ip protein_coding protein_coding MGP_NODShiLtJ_T0025700.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85791408 85805242 + MGP_NODShiLtJ_P0025700 Pttg1ip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025701.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85791995 85809600 + MGP_NODShiLtJ_P0025701 Pttg1ip protein_coding protein_coding MGP_NODShiLtJ_T0025702.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85793531 85805330 + MGP_NODShiLtJ_P0025702 Pttg1ip protein_coding protein_coding MGP_NODShiLtJ_T0025703.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85801724 85809563 + Pttg1ip protein_coding retained_intron MGP_NODShiLtJ_T0025704.1 MGP_NODShiLtJ_G0017258.1 mouse_genomes_project 10 85804667 85809461 + Pttg1ip protein_coding retained_intron MGP_NODShiLtJ_T0006015.1 MGP_NODShiLtJ_G0005032.1 mouse_genomes_project 10 20813978 20821154 + 1700021A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0006016.1 MGP_NODShiLtJ_G0005032.1 mouse_genomes_project 10 20814066 20820333 + 1700021A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0006017.1 MGP_NODShiLtJ_G0005032.1 mouse_genomes_project 10 20819928 20820237 + 1700021A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0024827.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44059458 44064147 - Smpd2 protein_coding retained_intron MGP_NODShiLtJ_T0024830.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44060988 44063938 - Smpd2 protein_coding retained_intron MGP_NODShiLtJ_T0024831.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44060988 44064157 - MGP_NODShiLtJ_P0024831 Smpd2 protein_coding protein_coding MGP_NODShiLtJ_T0024832.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44060994 44064147 - Smpd2 protein_coding retained_intron MGP_NODShiLtJ_T0024833.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44061365 44062062 - Smpd2 protein_coding retained_intron MGP_NODShiLtJ_T0024834.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44061455 44063914 - MGP_NODShiLtJ_P0024834 Smpd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024835.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44061847 44063496 - Smpd2 protein_coding retained_intron MGP_NODShiLtJ_T0024836.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44062175 44064155 - Smpd2 protein_coding retained_intron MGP_NODShiLtJ_T0024837.1 MGP_NODShiLtJ_G0017038.1 mouse_genomes_project 10 44062833 44064186 - Smpd2 protein_coding retained_intron MGP_NODShiLtJ_T0027324.1 MGP_NODShiLtJ_G0017741.1 mouse_genomes_project 10 145122280 145149616 - MGP_NODShiLtJ_P0027324 Dgka protein_coding protein_coding MGP_NODShiLtJ_T0025911.1 MGP_NODShiLtJ_G0017327.1 mouse_genomes_project 10 88421999 88423894 + MGP_NODShiLtJ_P0025911 Elane protein_coding protein_coding MGP_NODShiLtJ_T0098650.1 MGP_NODShiLtJ_G0037044.1 mouse_genomes_project 10 117159133 117159238 - Gm25522 snRNA snRNA MGP_NODShiLtJ_T0026916.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131137648 131241513 - MGP_NODShiLtJ_P0026916 Cnot2 protein_coding protein_coding MGP_NODShiLtJ_T0026917.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131137652 131241498 - MGP_NODShiLtJ_P0026917 Cnot2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026918.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131137652 131207404 - MGP_NODShiLtJ_P0026918 Cnot2 protein_coding protein_coding MGP_NODShiLtJ_T0026919.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131137653 131241502 - MGP_NODShiLtJ_P0026919 Cnot2 protein_coding protein_coding MGP_NODShiLtJ_T0026920.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131138274 131241513 - MGP_NODShiLtJ_P0026920 Cnot2 protein_coding protein_coding MGP_NODShiLtJ_T0026921.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131138684 131241504 - MGP_NODShiLtJ_P0026921 Cnot2 protein_coding protein_coding MGP_NODShiLtJ_T0026922.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131138687 131193435 - MGP_NODShiLtJ_P0026922 Cnot2 protein_coding protein_coding MGP_NODShiLtJ_T0026923.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131152405 131241485 - Cnot2 protein_coding processed_transcript MGP_NODShiLtJ_T0026924.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131152655 131241495 - Cnot2 protein_coding processed_transcript MGP_NODShiLtJ_T0026925.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131153686 131241492 - Cnot2 protein_coding processed_transcript MGP_NODShiLtJ_T0026926.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131153691 131241487 - Cnot2 protein_coding processed_transcript MGP_NODShiLtJ_T0026927.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131158682 131241467 - MGP_NODShiLtJ_P0026927 Cnot2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026928.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131162163 131241493 - Cnot2 protein_coding processed_transcript MGP_NODShiLtJ_T0026929.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131166464 131241498 - Cnot2 protein_coding processed_transcript MGP_NODShiLtJ_T0026930.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131166464 131241513 - MGP_NODShiLtJ_P0026930 Cnot2 protein_coding protein_coding MGP_NODShiLtJ_T0026931.1 MGP_NODShiLtJ_G0017608.1 mouse_genomes_project 10 131166833 131241485 - Cnot2 protein_coding processed_transcript MGP_NODShiLtJ_T0026092.1 MGP_NODShiLtJ_G0017366.1 mouse_genomes_project 10 89137135 89159237 - MGP_NODShiLtJ_P0026092 Atp8b3 protein_coding protein_coding MGP_NODShiLtJ_T0026682.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103794156 103829682 - MGP_NODShiLtJ_P0026682 Metap2 protein_coding protein_coding MGP_NODShiLtJ_T0026683.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103795494 103801296 - Metap2 protein_coding retained_intron MGP_NODShiLtJ_T0026684.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103797247 103808881 - MGP_NODShiLtJ_P0026684 Metap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026685.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103797955 103801231 - Metap2 protein_coding retained_intron MGP_NODShiLtJ_T0026686.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103797955 103802758 - MGP_NODShiLtJ_P0026686 Metap2 protein_coding protein_coding MGP_NODShiLtJ_T0026687.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103806064 103808739 - Metap2 protein_coding retained_intron MGP_NODShiLtJ_T0026688.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103806161 103829511 - MGP_NODShiLtJ_P0026688 Metap2 protein_coding protein_coding MGP_NODShiLtJ_T0026689.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103807418 103829709 - MGP_NODShiLtJ_P0026689 Metap2 protein_coding protein_coding MGP_NODShiLtJ_T0026690.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103818736 103829623 - Metap2 protein_coding retained_intron MGP_NODShiLtJ_T0026691.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103818815 103829656 - Metap2 protein_coding retained_intron MGP_NODShiLtJ_T0026692.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103829585 103830193 - Metap2 protein_coding processed_transcript MGP_NODShiLtJ_T0026693.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103829822 103831028 - Metap2 protein_coding processed_transcript MGP_NODShiLtJ_T0026694.1 MGP_NODShiLtJ_G0017521.1 mouse_genomes_project 10 103829939 103837216 - Metap2 protein_coding processed_transcript MGP_NODShiLtJ_T0006075.1 MGP_NODShiLtJ_G0005072.1 mouse_genomes_project 10 101970024 101972593 + Gm26700 lincRNA lincRNA MGP_NODShiLtJ_T0024454.1 MGP_NODShiLtJ_G0016898.1 mouse_genomes_project 10 16879029 16891913 + Txlnb protein_coding retained_intron MGP_NODShiLtJ_T0024455.1 MGP_NODShiLtJ_G0016898.1 mouse_genomes_project 10 16880116 16930152 + MGP_NODShiLtJ_P0024455 Txlnb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026259.1 MGP_NODShiLtJ_G0017417.1 mouse_genomes_project 10 90052529 90065494 - MGP_NODShiLtJ_P0026259 Fzr1 protein_coding protein_coding MGP_NODShiLtJ_T0026260.1 MGP_NODShiLtJ_G0017417.1 mouse_genomes_project 10 90053405 90065429 - MGP_NODShiLtJ_P0026260 Fzr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026261.1 MGP_NODShiLtJ_G0017417.1 mouse_genomes_project 10 90053679 90065441 - Fzr1 protein_coding retained_intron MGP_NODShiLtJ_T0026262.1 MGP_NODShiLtJ_G0017417.1 mouse_genomes_project 10 90053816 90058409 - MGP_NODShiLtJ_P0026262 Fzr1 protein_coding protein_coding MGP_NODShiLtJ_T0026263.1 MGP_NODShiLtJ_G0017417.1 mouse_genomes_project 10 90054583 90055849 - Fzr1 protein_coding retained_intron MGP_NODShiLtJ_T0026264.1 MGP_NODShiLtJ_G0017417.1 mouse_genomes_project 10 90062340 90065358 - Fzr1 protein_coding processed_transcript MGP_NODShiLtJ_T0012290.1 MGP_NODShiLtJ_G0010398.1 mouse_genomes_project 10 57149595 57150155 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025067.1 MGP_NODShiLtJ_G0017115.1 mouse_genomes_project 10 65285476 65339275 + MGP_NODShiLtJ_P0025067 P4ha1 protein_coding protein_coding MGP_NODShiLtJ_T0025068.1 MGP_NODShiLtJ_G0017115.1 mouse_genomes_project 10 65285544 65337923 + MGP_NODShiLtJ_P0025068 P4ha1 protein_coding protein_coding MGP_NODShiLtJ_T0025069.1 MGP_NODShiLtJ_G0017115.1 mouse_genomes_project 10 65285548 65338218 + MGP_NODShiLtJ_P0025069 P4ha1 protein_coding protein_coding MGP_NODShiLtJ_T0025171.1 MGP_NODShiLtJ_G0017137.1 mouse_genomes_project 10 67463652 67470004 + MGP_NODShiLtJ_P0025171 Prf1 protein_coding protein_coding MGP_NODShiLtJ_T0026855.1 MGP_NODShiLtJ_G0017580.1 mouse_genomes_project 10 124499134 124520369 + MGP_NODShiLtJ_P0026855 Csrp2 protein_coding protein_coding MGP_NODShiLtJ_T0025114.1 MGP_NODShiLtJ_G0017127.1 mouse_genomes_project 10 66338156 66364774 + MGP_NODShiLtJ_P0025114 Psap protein_coding protein_coding MGP_NODShiLtJ_T0025115.1 MGP_NODShiLtJ_G0017127.1 mouse_genomes_project 10 66338157 66364777 + MGP_NODShiLtJ_P0025115 Psap protein_coding protein_coding MGP_NODShiLtJ_T0025116.1 MGP_NODShiLtJ_G0017127.1 mouse_genomes_project 10 66338157 66364777 + MGP_NODShiLtJ_P0025116 Psap protein_coding protein_coding MGP_NODShiLtJ_T0025117.1 MGP_NODShiLtJ_G0017127.1 mouse_genomes_project 10 66338157 66364777 + MGP_NODShiLtJ_P0025117 Psap protein_coding protein_coding MGP_NODShiLtJ_T0025118.1 MGP_NODShiLtJ_G0017127.1 mouse_genomes_project 10 66344975 66364777 + MGP_NODShiLtJ_P0025118 Psap protein_coding protein_coding MGP_NODShiLtJ_T0009502.1 MGP_NODShiLtJ_G0007635.1 mouse_genomes_project 10 84073660 84073752 + Mir6409 miRNA miRNA MGP_NODShiLtJ_T0024660.1 MGP_NODShiLtJ_G0016971.1 mouse_genomes_project 10 29074844 29306113 + MGP_NODShiLtJ_P0024660 Themis protein_coding protein_coding MGP_NODShiLtJ_T0024661.1 MGP_NODShiLtJ_G0016971.1 mouse_genomes_project 10 29074844 29209166 + MGP_NODShiLtJ_P0024661 Themis protein_coding protein_coding MGP_NODShiLtJ_T0024662.1 MGP_NODShiLtJ_G0016971.1 mouse_genomes_project 10 29074879 29183352 + Themis protein_coding retained_intron MGP_NODShiLtJ_T0024663.1 MGP_NODShiLtJ_G0016971.1 mouse_genomes_project 10 29074881 29217057 + MGP_NODShiLtJ_P0024663 Themis protein_coding protein_coding MGP_NODShiLtJ_T0024664.1 MGP_NODShiLtJ_G0016971.1 mouse_genomes_project 10 29075111 29306116 + MGP_NODShiLtJ_P0024664 Themis protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024665.1 MGP_NODShiLtJ_G0016971.1 mouse_genomes_project 10 29075117 29197676 + MGP_NODShiLtJ_P0024665 Themis protein_coding protein_coding MGP_NODShiLtJ_T0024666.1 MGP_NODShiLtJ_G0016971.1 mouse_genomes_project 10 29075117 29156539 + MGP_NODShiLtJ_P0024666 Themis protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025265.1 MGP_NODShiLtJ_G0017165.1 mouse_genomes_project 10 69048468 69104861 - MGP_NODShiLtJ_P0025265 Ccar1 protein_coding protein_coding MGP_NODShiLtJ_T0026938.1 MGP_NODShiLtJ_G0017614.1 mouse_genomes_project 10 131780569 131793386 - MGP_NODShiLtJ_P0026938 Cct2 protein_coding protein_coding MGP_NODShiLtJ_T0024939.1 MGP_NODShiLtJ_G0017066.1 mouse_genomes_project 10 47980904 48076634 + MGP_NODShiLtJ_P0024939 Prep protein_coding protein_coding MGP_NODShiLtJ_T0026953.1 MGP_NODShiLtJ_G0017622.1 mouse_genomes_project 10 132467099 132472902 + Cpm protein_coding processed_transcript MGP_NODShiLtJ_T0026954.1 MGP_NODShiLtJ_G0017622.1 mouse_genomes_project 10 132467099 132513673 + Cpm protein_coding retained_intron MGP_NODShiLtJ_T0026955.1 MGP_NODShiLtJ_G0017622.1 mouse_genomes_project 10 132467099 132532712 + MGP_NODShiLtJ_P0026955 Cpm protein_coding protein_coding MGP_NODShiLtJ_T0026956.1 MGP_NODShiLtJ_G0017622.1 mouse_genomes_project 10 132521281 132530294 + Cpm protein_coding retained_intron MGP_NODShiLtJ_T0012286.1 MGP_NODShiLtJ_G0010394.1 mouse_genomes_project 10 46221031 46221109 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027194.1 MGP_NODShiLtJ_G0017694.1 mouse_genomes_project 10 143976115 143984909 + MGP_NODShiLtJ_P0027194 Zbtb39 protein_coding protein_coding MGP_NODShiLtJ_T0024715.1 MGP_NODShiLtJ_G0016996.1 mouse_genomes_project 10 35346305 35372497 - MGP_NODShiLtJ_P0024715 Rwdd1 protein_coding protein_coding MGP_NODShiLtJ_T0024716.1 MGP_NODShiLtJ_G0016996.1 mouse_genomes_project 10 35346311 35350996 - Rwdd1 protein_coding retained_intron MGP_NODShiLtJ_T0009479.1 MGP_NODShiLtJ_G0007612.1 mouse_genomes_project 10 5294590 5294684 + Mir5104 miRNA miRNA MGP_NODShiLtJ_T0025510.1 MGP_NODShiLtJ_G0017207.1 mouse_genomes_project 10 82929521 83009769 - MGP_NODShiLtJ_P0025510 Rsph14 protein_coding protein_coding MGP_NODShiLtJ_T0025511.1 MGP_NODShiLtJ_G0017207.1 mouse_genomes_project 10 82929521 83009757 - MGP_NODShiLtJ_P0025511 Rsph14 protein_coding protein_coding MGP_NODShiLtJ_T0025512.1 MGP_NODShiLtJ_G0017207.1 mouse_genomes_project 10 82929521 83009790 - MGP_NODShiLtJ_P0025512 Rsph14 protein_coding protein_coding MGP_NODShiLtJ_T0025513.1 MGP_NODShiLtJ_G0017207.1 mouse_genomes_project 10 82931988 83009757 - MGP_NODShiLtJ_P0025513 Rsph14 protein_coding protein_coding MGP_NODShiLtJ_T0025514.1 MGP_NODShiLtJ_G0017207.1 mouse_genomes_project 10 82933986 83009766 - MGP_NODShiLtJ_P0025514 Rsph14 protein_coding protein_coding MGP_NODShiLtJ_T0025518.1 MGP_NODShiLtJ_G0017207.1 mouse_genomes_project 10 82999517 83009732 - MGP_NODShiLtJ_P0025518 Rsph14 protein_coding protein_coding MGP_NODShiLtJ_T0025519.1 MGP_NODShiLtJ_G0017207.1 mouse_genomes_project 10 83001727 83009790 - Rsph14 protein_coding retained_intron MGP_NODShiLtJ_T0025603.1 MGP_NODShiLtJ_G0017232.1 mouse_genomes_project 10 84001967 84008819 + MGP_NODShiLtJ_P0025603 Vpreb3 protein_coding protein_coding MGP_NODShiLtJ_T0025604.1 MGP_NODShiLtJ_G0017232.1 mouse_genomes_project 10 84007481 84008839 + MGP_NODShiLtJ_P0025604 Vpreb3 protein_coding protein_coding MGP_NODShiLtJ_T0026778.1 MGP_NODShiLtJ_G0017558.1 mouse_genomes_project 10 111386576 111401607 - MGP_NODShiLtJ_P0026778 4930430F08Rik protein_coding protein_coding MGP_NODShiLtJ_T0101034.1 MGP_NODShiLtJ_G0039410.1 mouse_genomes_project 10 98197033 98198594 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101035.1 MGP_NODShiLtJ_G0039410.1 mouse_genomes_project 10 98197812 98198209 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0009550.1 MGP_NODShiLtJ_G0007683.1 mouse_genomes_project 10 144363218 144363296 + Mir677 miRNA miRNA MGP_NODShiLtJ_T0011180.1 MGP_NODShiLtJ_G0009313.1 mouse_genomes_project 10 145610331 145610636 - Gm25807 misc_RNA misc_RNA MGP_NODShiLtJ_T0099890.1 MGP_NODShiLtJ_G0038284.1 mouse_genomes_project 10 144362075 144362149 + Snord59a snoRNA snoRNA MGP_NODShiLtJ_T0024503.1 MGP_NODShiLtJ_G0016916.1 mouse_genomes_project 10 19092011 19142416 - MGP_NODShiLtJ_P0024503 Pex7 protein_coding protein_coding MGP_NODShiLtJ_T0024504.1 MGP_NODShiLtJ_G0016916.1 mouse_genomes_project 10 19092179 19142401 - MGP_NODShiLtJ_P0024504 Pex7 protein_coding protein_coding MGP_NODShiLtJ_T0024505.1 MGP_NODShiLtJ_G0016916.1 mouse_genomes_project 10 19092871 19102513 - Pex7 protein_coding retained_intron MGP_NODShiLtJ_T0024506.1 MGP_NODShiLtJ_G0016916.1 mouse_genomes_project 10 19118350 19142272 - MGP_NODShiLtJ_P0024506 Pex7 protein_coding protein_coding MGP_NODShiLtJ_T0099846.1 MGP_NODShiLtJ_G0038240.1 mouse_genomes_project 10 29873665 29873793 + Gm24286 snoRNA snoRNA MGP_NODShiLtJ_T0027357.1 MGP_NODShiLtJ_G0017760.1 mouse_genomes_project 10 145573747 145579621 - MGP_NODShiLtJ_P0027357 Olfr770 protein_coding protein_coding MGP_NODShiLtJ_T0027358.1 MGP_NODShiLtJ_G0017760.1 mouse_genomes_project 10 145573747 145574683 - MGP_NODShiLtJ_P0027358 Olfr770 protein_coding protein_coding MGP_NODShiLtJ_T0027359.1 MGP_NODShiLtJ_G0017760.1 mouse_genomes_project 10 145574293 145580364 - MGP_NODShiLtJ_P0027359 Olfr770 protein_coding protein_coding MGP_NODShiLtJ_T0027360.1 MGP_NODShiLtJ_G0017760.1 mouse_genomes_project 10 145574360 145580368 - MGP_NODShiLtJ_P0027360 Olfr770 protein_coding protein_coding MGP_NODShiLtJ_T0003023.1 MGP_NODShiLtJ_G0002818.1 mouse_genomes_project 10 95346326 95362707 + 4930486F22Rik antisense antisense MGP_NODShiLtJ_T0009532.1 MGP_NODShiLtJ_G0007665.1 mouse_genomes_project 10 107101364 107101453 - Gm24587 miRNA miRNA MGP_NODShiLtJ_T0006082.1 MGP_NODShiLtJ_G0005076.1 mouse_genomes_project 10 105495133 105506397 + 5730420D15Rik lincRNA lincRNA MGP_NODShiLtJ_T0003008.1 MGP_NODShiLtJ_G0002807.1 mouse_genomes_project 10 88967626 88968161 + Gm15123 antisense antisense MGP_NODShiLtJ_T0101523.1 MGP_NODShiLtJ_G0039693.1 mouse_genomes_project 10 21559656 21563543 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0024993.1 MGP_NODShiLtJ_G0017089.1 mouse_genomes_project 10 58424436 58434672 + MGP_NODShiLtJ_P0024993 Pln protein_coding protein_coding MGP_NODShiLtJ_T0024994.1 MGP_NODShiLtJ_G0017089.1 mouse_genomes_project 10 58424436 58434672 + MGP_NODShiLtJ_P0024994 Pln protein_coding protein_coding MGP_NODShiLtJ_T0024667.1 MGP_NODShiLtJ_G0016972.1 mouse_genomes_project 10 29382157 29398103 - MGP_NODShiLtJ_P0024667 2310057J18Rik protein_coding protein_coding MGP_NODShiLtJ_T0024668.1 MGP_NODShiLtJ_G0016972.1 mouse_genomes_project 10 29382233 29399012 - MGP_NODShiLtJ_P0024668 2310057J18Rik protein_coding protein_coding MGP_NODShiLtJ_T0024669.1 MGP_NODShiLtJ_G0016972.1 mouse_genomes_project 10 29382235 29384059 - 2310057J18Rik protein_coding retained_intron MGP_NODShiLtJ_T0024670.1 MGP_NODShiLtJ_G0016972.1 mouse_genomes_project 10 29382235 29399022 - MGP_NODShiLtJ_P0024670 2310057J18Rik protein_coding protein_coding MGP_NODShiLtJ_T0025597.1 MGP_NODShiLtJ_G0017230.1 mouse_genomes_project 10 83981347 83982119 - MGP_NODShiLtJ_P0025597 Mmp11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025598.1 MGP_NODShiLtJ_G0017230.1 mouse_genomes_project 10 83981347 83990601 - MGP_NODShiLtJ_P0025598 Mmp11 protein_coding protein_coding MGP_NODShiLtJ_T0025599.1 MGP_NODShiLtJ_G0017230.1 mouse_genomes_project 10 83981347 83990628 - MGP_NODShiLtJ_P0025599 Mmp11 protein_coding protein_coding MGP_NODShiLtJ_T0025600.1 MGP_NODShiLtJ_G0017230.1 mouse_genomes_project 10 83981348 83984538 - MGP_NODShiLtJ_P0025600 Mmp11 protein_coding protein_coding MGP_NODShiLtJ_T0025601.1 MGP_NODShiLtJ_G0017230.1 mouse_genomes_project 10 83984885 83985816 - Mmp11 protein_coding retained_intron MGP_NODShiLtJ_T0009517.1 MGP_NODShiLtJ_G0007650.1 mouse_genomes_project 10 89761862 89761922 + Mir5615-2 miRNA miRNA MGP_NODShiLtJ_T0026161.1 MGP_NODShiLtJ_G0017392.1 mouse_genomes_project 10 89671937 89677765 - MGP_NODShiLtJ_P0026161 Diras1 protein_coding protein_coding MGP_NODShiLtJ_T0026162.1 MGP_NODShiLtJ_G0017392.1 mouse_genomes_project 10 89674439 89678018 - MGP_NODShiLtJ_P0026162 Diras1 protein_coding protein_coding MGP_NODShiLtJ_T0025111.1 MGP_NODShiLtJ_G0017126.1 mouse_genomes_project 10 66227864 66270395 - MGP_NODShiLtJ_P0025111 Chst3 protein_coding protein_coding MGP_NODShiLtJ_T0025112.1 MGP_NODShiLtJ_G0017126.1 mouse_genomes_project 10 66227866 66235040 - MGP_NODShiLtJ_P0025112 Chst3 protein_coding protein_coding MGP_NODShiLtJ_T0025113.1 MGP_NODShiLtJ_G0017126.1 mouse_genomes_project 10 66231937 66240548 - MGP_NODShiLtJ_P0025113 Chst3 protein_coding protein_coding MGP_NODShiLtJ_T0012309.1 MGP_NODShiLtJ_G0010417.1 mouse_genomes_project 10 88424389 88424639 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026826.1 MGP_NODShiLtJ_G0017571.1 mouse_genomes_project 10 120175925 120343897 + MGP_NODShiLtJ_P0026826 Lin7a protein_coding protein_coding MGP_NODShiLtJ_T0026827.1 MGP_NODShiLtJ_G0017571.1 mouse_genomes_project 10 120175925 120343897 + MGP_NODShiLtJ_P0026827 Lin7a protein_coding protein_coding MGP_NODShiLtJ_T0011156.1 MGP_NODShiLtJ_G0009289.1 mouse_genomes_project 10 11077135 11077371 - Gm27741 misc_RNA misc_RNA MGP_NODShiLtJ_T0026105.1 MGP_NODShiLtJ_G0017370.1 mouse_genomes_project 10 89230347 89235122 + MGP_NODShiLtJ_P0026105 Adat3 protein_coding protein_coding MGP_NODShiLtJ_T0026108.1 MGP_NODShiLtJ_G0017370.1 mouse_genomes_project 10 89233502 89243238 + MGP_NODShiLtJ_P0026108 Adat3 protein_coding protein_coding MGP_NODShiLtJ_T0024924.1 MGP_NODShiLtJ_G0017059.1 mouse_genomes_project 10 46361180 46368900 + MGP_NODShiLtJ_P0024924 Cd24a protein_coding protein_coding MGP_NODShiLtJ_T0026770.1 MGP_NODShiLtJ_G0017555.1 mouse_genomes_project 10 111067478 111075557 - MGP_NODShiLtJ_P0026770 protein_coding protein_coding MGP_NODShiLtJ_T0012278.1 MGP_NODShiLtJ_G0010386.1 mouse_genomes_project 10 32335148 32335762 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101531.1 MGP_NODShiLtJ_G0039701.1 mouse_genomes_project 10 145757179 145757386 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006025.1 MGP_NODShiLtJ_G0005039.1 mouse_genomes_project 10 39329917 39372695 + Gm26535 lincRNA lincRNA MGP_NODShiLtJ_T0025999.1 MGP_NODShiLtJ_G0017347.1 mouse_genomes_project 10 88724055 88729476 + MGP_NODShiLtJ_P0025999 Cirbp protein_coding protein_coding MGP_NODShiLtJ_T0026000.1 MGP_NODShiLtJ_G0017347.1 mouse_genomes_project 10 88725803 88730815 + MGP_NODShiLtJ_P0026000 Cirbp protein_coding protein_coding MGP_NODShiLtJ_T0026001.1 MGP_NODShiLtJ_G0017347.1 mouse_genomes_project 10 88725865 88731948 + MGP_NODShiLtJ_P0026001 Cirbp protein_coding protein_coding MGP_NODShiLtJ_T0026002.1 MGP_NODShiLtJ_G0017347.1 mouse_genomes_project 10 88725888 88729289 + Cirbp protein_coding retained_intron MGP_NODShiLtJ_T0026003.1 MGP_NODShiLtJ_G0017347.1 mouse_genomes_project 10 88725911 88730297 + Cirbp protein_coding retained_intron MGP_NODShiLtJ_T0026004.1 MGP_NODShiLtJ_G0017347.1 mouse_genomes_project 10 88729386 88730364 + Cirbp protein_coding retained_intron MGP_NODShiLtJ_T0026005.1 MGP_NODShiLtJ_G0017347.1 mouse_genomes_project 10 88731141 88731858 + Cirbp protein_coding retained_intron MGP_NODShiLtJ_T0025629.1 MGP_NODShiLtJ_G0017242.1 mouse_genomes_project 10 84576986 84587736 - MGP_NODShiLtJ_P0025629 Ybey protein_coding protein_coding MGP_NODShiLtJ_T0027210.1 MGP_NODShiLtJ_G0017704.1 mouse_genomes_project 10 144257024 144275846 - MGP_NODShiLtJ_P0027210 Hsd17b6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024482.1 MGP_NODShiLtJ_G0016905.1 mouse_genomes_project 10 17698451 17704421 - MGP_NODShiLtJ_P0024482 Hebp2 protein_coding protein_coding MGP_NODShiLtJ_T0098653.1 MGP_NODShiLtJ_G0037047.1 mouse_genomes_project 10 124482248 124482354 - Gm22236 snRNA snRNA MGP_NODShiLtJ_T0006059.1 MGP_NODShiLtJ_G0005066.1 mouse_genomes_project 10 93698451 93701704 - Gm17249 lincRNA lincRNA MGP_NODShiLtJ_T0026296.1 MGP_NODShiLtJ_G0017424.1 mouse_genomes_project 10 90208792 90214648 - Gna15 protein_coding retained_intron MGP_NODShiLtJ_T0026297.1 MGP_NODShiLtJ_G0017424.1 mouse_genomes_project 10 90208799 90236573 - MGP_NODShiLtJ_P0026297 Gna15 protein_coding protein_coding MGP_NODShiLtJ_T0026298.1 MGP_NODShiLtJ_G0017424.1 mouse_genomes_project 10 90209573 90219114 - Gna15 protein_coding retained_intron MGP_NODShiLtJ_T0025301.1 MGP_NODShiLtJ_G0017172.1 mouse_genomes_project 10 69466114 69466564 + MGP_NODShiLtJ_P0025301 Atoh7 protein_coding protein_coding MGP_NODShiLtJ_T0025849.1 MGP_NODShiLtJ_G0017315.1 mouse_genomes_project 10 88221532 88229038 + MGP_NODShiLtJ_P0025849 Bsg protein_coding protein_coding MGP_NODShiLtJ_T0025850.1 MGP_NODShiLtJ_G0017315.1 mouse_genomes_project 10 88221564 88228956 + MGP_NODShiLtJ_P0025850 Bsg protein_coding protein_coding MGP_NODShiLtJ_T0025851.1 MGP_NODShiLtJ_G0017315.1 mouse_genomes_project 10 88221572 88227789 + Bsg protein_coding processed_transcript MGP_NODShiLtJ_T0025852.1 MGP_NODShiLtJ_G0017315.1 mouse_genomes_project 10 88227165 88228771 + Bsg protein_coding retained_intron MGP_NODShiLtJ_T0027016.1 MGP_NODShiLtJ_G0017637.1 mouse_genomes_project 10 135631968 135637962 - protein_coding retained_intron MGP_NODShiLtJ_T0009499.1 MGP_NODShiLtJ_G0007632.1 mouse_genomes_project 10 67989114 67989199 + Mir5108 miRNA miRNA MGP_NODShiLtJ_T0012284.1 MGP_NODShiLtJ_G0010392.1 mouse_genomes_project 10 46073565 46073920 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099889.1 MGP_NODShiLtJ_G0038283.1 mouse_genomes_project 10 144214898 144215029 - Gm23996 snoRNA snoRNA MGP_NODShiLtJ_T0024516.1 MGP_NODShiLtJ_G0016919.1 mouse_genomes_project 10 19584420 19586208 - MGP_NODShiLtJ_P0024516 4933406P04Rik protein_coding protein_coding MGP_NODShiLtJ_T0026957.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132534247 132560281 - MGP_NODShiLtJ_P0026957 Mdm2 protein_coding protein_coding MGP_NODShiLtJ_T0026958.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132534247 132560281 - MGP_NODShiLtJ_P0026958 Mdm2 protein_coding protein_coding MGP_NODShiLtJ_T0026959.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132534254 132559545 - MGP_NODShiLtJ_P0026959 Mdm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026960.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132535454 132560208 - Mdm2 protein_coding retained_intron MGP_NODShiLtJ_T0026961.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132535588 132536866 - Mdm2 protein_coding retained_intron MGP_NODShiLtJ_T0026962.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132541024 132559601 - Mdm2 protein_coding processed_transcript MGP_NODShiLtJ_T0026963.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132542131 132560234 - Mdm2 protein_coding processed_transcript MGP_NODShiLtJ_T0026964.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132548351 132559815 - Mdm2 protein_coding processed_transcript MGP_NODShiLtJ_T0026965.1 MGP_NODShiLtJ_G0017623.1 mouse_genomes_project 10 132559240 132560237 - Mdm2 protein_coding retained_intron MGP_NODShiLtJ_T0098250.1 MGP_NODShiLtJ_G0036661.1 mouse_genomes_project 10 104392590 104394432 + Gm16155 sense_intronic sense_intronic MGP_NODShiLtJ_T0024673.1 MGP_NODShiLtJ_G0016975.1 mouse_genomes_project 10 29680148 29699405 + MGP_NODShiLtJ_P0024673 9330159F19Rik protein_coding protein_coding MGP_NODShiLtJ_T0098607.1 MGP_NODShiLtJ_G0037001.1 mouse_genomes_project 10 22823184 22823291 - Gm24655 snRNA snRNA MGP_NODShiLtJ_T0025159.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67318844 67340680 + MGP_NODShiLtJ_P0025159 Tbata protein_coding protein_coding MGP_NODShiLtJ_T0025160.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67318854 67330370 + MGP_NODShiLtJ_P0025160 Tbata protein_coding protein_coding MGP_NODShiLtJ_T0025161.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67318876 67340685 + MGP_NODShiLtJ_P0025161 Tbata protein_coding protein_coding MGP_NODShiLtJ_T0025162.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67321260 67333339 + MGP_NODShiLtJ_P0025162 Tbata protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025163.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67322152 67330367 + Tbata protein_coding processed_transcript MGP_NODShiLtJ_T0025164.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67322152 67330367 + Tbata protein_coding processed_transcript MGP_NODShiLtJ_T0025165.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67322152 67330367 + Tbata protein_coding processed_transcript MGP_NODShiLtJ_T0025166.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67322152 67330366 + MGP_NODShiLtJ_P0025166 Tbata protein_coding protein_coding MGP_NODShiLtJ_T0025167.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67322276 67330367 + Tbata protein_coding processed_transcript MGP_NODShiLtJ_T0025168.1 MGP_NODShiLtJ_G0017135.1 mouse_genomes_project 10 67322825 67340683 + MGP_NODShiLtJ_P0025168 Tbata protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025589.1 MGP_NODShiLtJ_G0017227.1 mouse_genomes_project 10 83904079 83905054 - MGP_NODShiLtJ_P0025589 Mif protein_coding protein_coding MGP_NODShiLtJ_T0017001.1 MGP_NODShiLtJ_G0015007.1 mouse_genomes_project 10 77565551 77577940 + Mrln processed_transcript lincRNA MGP_NODShiLtJ_T0017002.1 MGP_NODShiLtJ_G0015007.1 mouse_genomes_project 10 77565554 77582369 + Mrln processed_transcript lincRNA MGP_NODShiLtJ_T0017003.1 MGP_NODShiLtJ_G0015007.1 mouse_genomes_project 10 77565597 77582238 + Mrln processed_transcript lincRNA MGP_NODShiLtJ_T0017004.1 MGP_NODShiLtJ_G0015007.1 mouse_genomes_project 10 77565612 77572796 + Mrln processed_transcript lincRNA MGP_NODShiLtJ_T0017005.1 MGP_NODShiLtJ_G0015007.1 mouse_genomes_project 10 77579551 77582368 + Mrln processed_transcript retained_intron MGP_NODShiLtJ_T0026410.1 MGP_NODShiLtJ_G0017450.1 mouse_genomes_project 10 92537622 92595031 + MGP_NODShiLtJ_P0026410 A230046K03Rik protein_coding protein_coding MGP_NODShiLtJ_T0026411.1 MGP_NODShiLtJ_G0017450.1 mouse_genomes_project 10 92537723 92592898 + MGP_NODShiLtJ_P0026411 A230046K03Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025804.1 MGP_NODShiLtJ_G0017295.1 mouse_genomes_project 10 87225349 87232115 + MGP_NODShiLtJ_P0025804 Olfr1355 protein_coding protein_coding MGP_NODShiLtJ_T0026823.1 MGP_NODShiLtJ_G0017570.1 mouse_genomes_project 10 119739372 120010078 - MGP_NODShiLtJ_P0026823 Acss3 protein_coding protein_coding MGP_NODShiLtJ_T0026824.1 MGP_NODShiLtJ_G0017570.1 mouse_genomes_project 10 119797670 120010078 - MGP_NODShiLtJ_P0026824 Acss3 protein_coding protein_coding MGP_NODShiLtJ_T0026825.1 MGP_NODShiLtJ_G0017570.1 mouse_genomes_project 10 119985125 120010059 - Acss3 protein_coding processed_transcript MGP_NODShiLtJ_T0026397.1 MGP_NODShiLtJ_G0017446.1 mouse_genomes_project 10 91913131 92130239 + MGP_NODShiLtJ_P0026397 Chst11 protein_coding protein_coding MGP_NODShiLtJ_T0025080.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65684457 65849621 + MGP_NODShiLtJ_P0025080 Micu1 protein_coding protein_coding MGP_NODShiLtJ_T0025081.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65684543 65728909 + Micu1 protein_coding retained_intron MGP_NODShiLtJ_T0025082.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65684579 65849619 + MGP_NODShiLtJ_P0025082 Micu1 protein_coding protein_coding MGP_NODShiLtJ_T0025083.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65684598 65849619 + MGP_NODShiLtJ_P0025083 Micu1 protein_coding protein_coding MGP_NODShiLtJ_T0025084.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65684608 65849612 + MGP_NODShiLtJ_P0025084 Micu1 protein_coding protein_coding MGP_NODShiLtJ_T0025085.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65684629 65772917 + MGP_NODShiLtJ_P0025085 Micu1 protein_coding protein_coding MGP_NODShiLtJ_T0025086.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65684638 65735718 + Micu1 protein_coding retained_intron MGP_NODShiLtJ_T0025087.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65724096 65724771 + Micu1 protein_coding processed_transcript MGP_NODShiLtJ_T0025088.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65724786 65741187 + MGP_NODShiLtJ_P0025088 Micu1 protein_coding protein_coding MGP_NODShiLtJ_T0025089.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65746425 65773015 + Micu1 protein_coding processed_transcript MGP_NODShiLtJ_T0025090.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65813138 65828476 + Micu1 protein_coding retained_intron MGP_NODShiLtJ_T0025091.1 MGP_NODShiLtJ_G0017120.1 mouse_genomes_project 10 65843422 65848892 + Micu1 protein_coding retained_intron MGP_NODShiLtJ_T0026537.1 MGP_NODShiLtJ_G0017489.1 mouse_genomes_project 10 97798567 97837346 + MGP_NODShiLtJ_P0026537 Gnptab protein_coding protein_coding MGP_NODShiLtJ_T0026538.1 MGP_NODShiLtJ_G0017489.1 mouse_genomes_project 10 97798659 97837303 + MGP_NODShiLtJ_P0026538 Gnptab protein_coding protein_coding MGP_NODShiLtJ_T0026539.1 MGP_NODShiLtJ_G0017489.1 mouse_genomes_project 10 97798659 97870099 + MGP_NODShiLtJ_P0026539 Gnptab protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026540.1 MGP_NODShiLtJ_G0017489.1 mouse_genomes_project 10 97798661 97870108 + MGP_NODShiLtJ_P0026540 Gnptab protein_coding protein_coding MGP_NODShiLtJ_T0026541.1 MGP_NODShiLtJ_G0017489.1 mouse_genomes_project 10 97852218 97855941 + Gnptab protein_coding processed_transcript MGP_NODShiLtJ_T0026542.1 MGP_NODShiLtJ_G0017489.1 mouse_genomes_project 10 97856013 97863641 + Gnptab protein_coding processed_transcript MGP_NODShiLtJ_T0026543.1 MGP_NODShiLtJ_G0017489.1 mouse_genomes_project 10 97858822 97859508 + Gnptab protein_coding retained_intron MGP_NODShiLtJ_T0026882.1 MGP_NODShiLtJ_G0017594.1 mouse_genomes_project 10 128818684 129282759 - MGP_NODShiLtJ_P0026882 Trhde protein_coding protein_coding MGP_NODShiLtJ_T0026883.1 MGP_NODShiLtJ_G0017594.1 mouse_genomes_project 10 129013210 129283702 - Trhde protein_coding retained_intron MGP_NODShiLtJ_T0026884.1 MGP_NODShiLtJ_G0017594.1 mouse_genomes_project 10 129273246 129282765 - Trhde protein_coding retained_intron MGP_NODShiLtJ_T0025576.1 MGP_NODShiLtJ_G0017222.1 mouse_genomes_project 10 83806172 83815675 - MGP_NODShiLtJ_P0025576 Gm20441 protein_coding protein_coding MGP_NODShiLtJ_T0027029.1 MGP_NODShiLtJ_G0017645.1 mouse_genomes_project 10 136851586 136892473 - MGP_NODShiLtJ_P0027029 Tbk1 protein_coding protein_coding MGP_NODShiLtJ_T0011178.1 MGP_NODShiLtJ_G0009311.1 mouse_genomes_project 10 129770611 129770917 - Gm22794 misc_RNA misc_RNA MGP_NODShiLtJ_T0024500.1 MGP_NODShiLtJ_G0016913.1 mouse_genomes_project 10 18855861 18873828 + MGP_NODShiLtJ_P0024500 protein_coding protein_coding MGP_NODShiLtJ_T0026440.1 MGP_NODShiLtJ_G0017458.1 mouse_genomes_project 10 94011820 94113739 + MGP_NODShiLtJ_P0026440 Ric8b protein_coding protein_coding MGP_NODShiLtJ_T0026441.1 MGP_NODShiLtJ_G0017458.1 mouse_genomes_project 10 94011860 94113739 + MGP_NODShiLtJ_P0026441 Ric8b protein_coding protein_coding MGP_NODShiLtJ_T0026442.1 MGP_NODShiLtJ_G0017459.1 mouse_genomes_project 10 94214437 94219914 - MGP_NODShiLtJ_P0026442 Fhl4 protein_coding protein_coding MGP_NODShiLtJ_T0000806.1 MGP_NODShiLtJ_G0000736.1 mouse_genomes_project 10 111629868 111630635 - TEC TEC MGP_NODShiLtJ_T0009482.1 MGP_NODShiLtJ_G0007615.1 mouse_genomes_project 10 22386409 22386470 - Mir7663 miRNA miRNA MGP_NODShiLtJ_T0024638.1 MGP_NODShiLtJ_G0016964.1 mouse_genomes_project 10 25942958 26044895 - MGP_NODShiLtJ_P0024638 Tmem200a protein_coding protein_coding MGP_NODShiLtJ_T0026484.1 MGP_NODShiLtJ_G0017473.1 mouse_genomes_project 10 95941600 95943052 + MGP_NODShiLtJ_P0026484 Gm6729 protein_coding protein_coding MGP_NODShiLtJ_T0026737.1 MGP_NODShiLtJ_G0017533.1 mouse_genomes_project 10 105597772 105630936 + MGP_NODShiLtJ_P0026737 Ube2n protein_coding protein_coding MGP_NODShiLtJ_T0012329.1 MGP_NODShiLtJ_G0010437.1 mouse_genomes_project 10 137550401 137551388 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002991.1 MGP_NODShiLtJ_G0002792.1 mouse_genomes_project 10 68865570 68866946 + 4933428P19Rik antisense antisense MGP_NODShiLtJ_T0009497.1 MGP_NODShiLtJ_G0007630.1 mouse_genomes_project 10 67071547 67071669 + Mir466j miRNA miRNA MGP_NODShiLtJ_T0000805.1 MGP_NODShiLtJ_G0000735.1 mouse_genomes_project 10 109054457 109054821 - TEC TEC MGP_NODShiLtJ_T0003054.1 MGP_NODShiLtJ_G0002839.1 mouse_genomes_project 10 137119337 137120703 + C030027H14Rik antisense antisense MGP_NODShiLtJ_T0026874.1 MGP_NODShiLtJ_G0017589.1 mouse_genomes_project 10 125759126 125797716 + MGP_NODShiLtJ_P0026874 Glipr1l2 protein_coding protein_coding MGP_NODShiLtJ_T0026875.1 MGP_NODShiLtJ_G0017589.1 mouse_genomes_project 10 125759126 125800271 + MGP_NODShiLtJ_P0026875 Glipr1l2 protein_coding protein_coding MGP_NODShiLtJ_T0027135.1 MGP_NODShiLtJ_G0017681.1 mouse_genomes_project 10 143549690 143552052 - MGP_NODShiLtJ_P0027135 Inhbe protein_coding protein_coding MGP_NODShiLtJ_T0024613.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24752784 24797890 + MGP_NODShiLtJ_P0024613 Med23 protein_coding protein_coding MGP_NODShiLtJ_T0024614.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24752835 24777541 + Med23 protein_coding retained_intron MGP_NODShiLtJ_T0024615.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24752835 24790968 + MGP_NODShiLtJ_P0024615 Med23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024616.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24752845 24797668 + MGP_NODShiLtJ_P0024616 Med23 protein_coding protein_coding MGP_NODShiLtJ_T0024617.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24752896 24781695 + Med23 protein_coding processed_transcript MGP_NODShiLtJ_T0024618.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24753107 24761256 + MGP_NODShiLtJ_P0024618 Med23 protein_coding protein_coding MGP_NODShiLtJ_T0024619.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24753440 24758498 + Med23 protein_coding retained_intron MGP_NODShiLtJ_T0024620.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24759772 24775952 + MGP_NODShiLtJ_P0024620 Med23 protein_coding protein_coding MGP_NODShiLtJ_T0024621.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24771810 24797227 + MGP_NODShiLtJ_P0024621 Med23 protein_coding protein_coding MGP_NODShiLtJ_T0024622.1 MGP_NODShiLtJ_G0016959.1 mouse_genomes_project 10 24774322 24775944 + Med23 protein_coding retained_intron MGP_NODShiLtJ_T0024423.1 MGP_NODShiLtJ_G0016891.1 mouse_genomes_project 10 11679624 11929096 - MGP_NODShiLtJ_P0024423 Aig1 protein_coding protein_coding MGP_NODShiLtJ_T0024424.1 MGP_NODShiLtJ_G0016891.1 mouse_genomes_project 10 11680239 11928938 - MGP_NODShiLtJ_P0024424 Aig1 protein_coding protein_coding MGP_NODShiLtJ_T0024425.1 MGP_NODShiLtJ_G0016891.1 mouse_genomes_project 10 11686194 11929073 - MGP_NODShiLtJ_P0024425 Aig1 protein_coding protein_coding MGP_NODShiLtJ_T0024426.1 MGP_NODShiLtJ_G0016891.1 mouse_genomes_project 10 11687331 11903289 - Aig1 protein_coding processed_transcript MGP_NODShiLtJ_T0024427.1 MGP_NODShiLtJ_G0016891.1 mouse_genomes_project 10 11842963 11920831 - Aig1 protein_coding retained_intron MGP_NODShiLtJ_T0024428.1 MGP_NODShiLtJ_G0016891.1 mouse_genomes_project 10 11884527 11929092 - Aig1 protein_coding retained_intron MGP_NODShiLtJ_T0024429.1 MGP_NODShiLtJ_G0016891.1 mouse_genomes_project 10 11887324 11928945 - Aig1 protein_coding processed_transcript MGP_NODShiLtJ_T0024302.1 MGP_NODShiLtJ_G0016862.1 mouse_genomes_project 10 5113695 5127954 + MGP_NODShiLtJ_P0024302 Nup43 protein_coding protein_coding MGP_NODShiLtJ_T0024303.1 MGP_NODShiLtJ_G0016862.1 mouse_genomes_project 10 5113706 5114486 + Nup43 protein_coding retained_intron MGP_NODShiLtJ_T0024304.1 MGP_NODShiLtJ_G0016862.1 mouse_genomes_project 10 5113732 5125150 + Nup43 protein_coding retained_intron MGP_NODShiLtJ_T0024305.1 MGP_NODShiLtJ_G0016862.1 mouse_genomes_project 10 5117322 5124324 + Nup43 protein_coding retained_intron MGP_NODShiLtJ_T0024952.1 MGP_NODShiLtJ_G0017071.1 mouse_genomes_project 10 53191915 54266476 - MGP_NODShiLtJ_P0024952 Grik2 protein_coding protein_coding MGP_NODShiLtJ_T0024953.1 MGP_NODShiLtJ_G0017071.1 mouse_genomes_project 10 53192298 53391736 - Grik2 protein_coding retained_intron MGP_NODShiLtJ_T0024954.1 MGP_NODShiLtJ_G0017071.1 mouse_genomes_project 10 53192298 54260983 - MGP_NODShiLtJ_P0024954 Grik2 protein_coding protein_coding MGP_NODShiLtJ_T0024955.1 MGP_NODShiLtJ_G0017071.1 mouse_genomes_project 10 53193182 54260983 - MGP_NODShiLtJ_P0024955 Grik2 protein_coding protein_coding MGP_NODShiLtJ_T0024956.1 MGP_NODShiLtJ_G0017071.1 mouse_genomes_project 10 53193444 54261133 - MGP_NODShiLtJ_P0024956 Grik2 protein_coding protein_coding MGP_NODShiLtJ_T0024957.1 MGP_NODShiLtJ_G0017071.1 mouse_genomes_project 10 53204373 54260983 - MGP_NODShiLtJ_P0024957 Grik2 protein_coding protein_coding MGP_NODShiLtJ_T0024958.1 MGP_NODShiLtJ_G0017071.1 mouse_genomes_project 10 53744550 54266464 - MGP_NODShiLtJ_P0024958 Grik2 protein_coding protein_coding MGP_NODShiLtJ_T0026913.1 MGP_NODShiLtJ_G0017607.1 mouse_genomes_project 10 131064536 131126345 - MGP_NODShiLtJ_P0026913 Kcnmb4 protein_coding protein_coding MGP_NODShiLtJ_T0026914.1 MGP_NODShiLtJ_G0017607.1 mouse_genomes_project 10 131084466 131125902 - MGP_NODShiLtJ_P0026914 Kcnmb4 protein_coding protein_coding MGP_NODShiLtJ_T0026915.1 MGP_NODShiLtJ_G0017607.1 mouse_genomes_project 10 131115441 131125889 - MGP_NODShiLtJ_P0026915 Kcnmb4 protein_coding protein_coding MGP_NODShiLtJ_T0027069.1 MGP_NODShiLtJ_G0017659.1 mouse_genomes_project 10 143156201 143177167 + MGP_NODShiLtJ_P0027069 Avil protein_coding protein_coding MGP_NODShiLtJ_T0027070.1 MGP_NODShiLtJ_G0017659.1 mouse_genomes_project 10 143156231 143163056 + MGP_NODShiLtJ_P0027070 Avil protein_coding protein_coding MGP_NODShiLtJ_T0027071.1 MGP_NODShiLtJ_G0017659.1 mouse_genomes_project 10 143158493 143163128 + MGP_NODShiLtJ_P0027071 Avil protein_coding protein_coding MGP_NODShiLtJ_T0027072.1 MGP_NODShiLtJ_G0017659.1 mouse_genomes_project 10 143158629 143176951 + MGP_NODShiLtJ_P0027072 Avil protein_coding protein_coding MGP_NODShiLtJ_T0026295.1 MGP_NODShiLtJ_G0017423.1 mouse_genomes_project 10 90204231 90206619 - MGP_NODShiLtJ_P0026295 S1pr4 protein_coding protein_coding MGP_NODShiLtJ_T0026729.1 MGP_NODShiLtJ_G0017531.1 mouse_genomes_project 10 105462342 105489730 - MGP_NODShiLtJ_P0026729 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026730.1 MGP_NODShiLtJ_G0017531.1 mouse_genomes_project 10 105464647 105469982 - protein_coding retained_intron MGP_NODShiLtJ_T0026731.1 MGP_NODShiLtJ_G0017531.1 mouse_genomes_project 10 105465334 105489583 - protein_coding processed_transcript MGP_NODShiLtJ_T0026732.1 MGP_NODShiLtJ_G0017531.1 mouse_genomes_project 10 105478306 105489730 - protein_coding processed_transcript MGP_NODShiLtJ_T0026733.1 MGP_NODShiLtJ_G0017531.1 mouse_genomes_project 10 105488352 105494616 - MGP_NODShiLtJ_P0026733 protein_coding protein_coding MGP_NODShiLtJ_T0026734.1 MGP_NODShiLtJ_G0017531.1 mouse_genomes_project 10 105490282 105494427 - protein_coding processed_transcript MGP_NODShiLtJ_T0026735.1 MGP_NODShiLtJ_G0017531.1 mouse_genomes_project 10 105492849 105493758 - protein_coding processed_transcript MGP_NODShiLtJ_T0006055.1 MGP_NODShiLtJ_G0005063.1 mouse_genomes_project 10 91734356 91747323 + 1700028I16Rik lincRNA lincRNA MGP_NODShiLtJ_T0025066.1 MGP_NODShiLtJ_G0017114.1 mouse_genomes_project 10 65165606 65170034 + MGP_NODShiLtJ_P0025066 Sowahc protein_coding protein_coding MGP_NODShiLtJ_T0027086.1 MGP_NODShiLtJ_G0017663.1 mouse_genomes_project 10 143207625 143212345 + MGP_NODShiLtJ_P0027086 Cyp27b1 protein_coding protein_coding MGP_NODShiLtJ_T0027087.1 MGP_NODShiLtJ_G0017663.1 mouse_genomes_project 10 143207625 143212382 + MGP_NODShiLtJ_P0027087 Cyp27b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027088.1 MGP_NODShiLtJ_G0017663.1 mouse_genomes_project 10 143208046 143209242 + Cyp27b1 protein_coding processed_transcript MGP_NODShiLtJ_T0026879.1 MGP_NODShiLtJ_G0017592.1 mouse_genomes_project 10 126847083 126850648 - MGP_NODShiLtJ_P0026879 Atxn7l3b protein_coding protein_coding MGP_NODShiLtJ_T0026880.1 MGP_NODShiLtJ_G0017592.1 mouse_genomes_project 10 126849441 126850654 - Atxn7l3b protein_coding processed_transcript MGP_NODShiLtJ_T0097743.1 MGP_NODShiLtJ_G0036155.1 mouse_genomes_project 10 143127526 143149712 + pseudogene pseudogene MGP_NODShiLtJ_T0097882.1 MGP_NODShiLtJ_G0036294.1 mouse_genomes_project 10 86619589 86619708 + n-R5s77 rRNA rRNA MGP_NODShiLtJ_T0006102.1 MGP_NODShiLtJ_G0005090.1 mouse_genomes_project 10 144547789 144551354 - Gm26847 lincRNA lincRNA MGP_NODShiLtJ_T0009531.1 MGP_NODShiLtJ_G0007664.1 mouse_genomes_project 10 105644448 105644539 - Mir3058 miRNA miRNA MGP_NODShiLtJ_T0098601.1 MGP_NODShiLtJ_G0036995.1 mouse_genomes_project 10 6168807 6168913 + Gm24374 snRNA snRNA MGP_NODShiLtJ_T0026801.1 MGP_NODShiLtJ_G0017563.1 mouse_genomes_project 10 114698637 114723095 - MGP_NODShiLtJ_P0026801 Alx1 protein_coding protein_coding MGP_NODShiLtJ_T0026802.1 MGP_NODShiLtJ_G0017563.1 mouse_genomes_project 10 114698638 114722823 - MGP_NODShiLtJ_P0026802 Alx1 protein_coding protein_coding MGP_NODShiLtJ_T0026803.1 MGP_NODShiLtJ_G0017563.1 mouse_genomes_project 10 114698942 114717182 - Alx1 protein_coding processed_transcript MGP_NODShiLtJ_T0097735.1 MGP_NODShiLtJ_G0036147.1 mouse_genomes_project 10 64721173 64721742 - pseudogene pseudogene MGP_NODShiLtJ_T0026831.1 MGP_NODShiLtJ_G0017575.1 mouse_genomes_project 10 121241928 121400121 + MGP_NODShiLtJ_P0026831 Ppp1r12a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026832.1 MGP_NODShiLtJ_G0017575.1 mouse_genomes_project 10 121241928 121397708 + MGP_NODShiLtJ_P0026832 Ppp1r12a protein_coding protein_coding MGP_NODShiLtJ_T0099858.1 MGP_NODShiLtJ_G0038252.1 mouse_genomes_project 10 56835616 56835744 + Gm23906 snoRNA snoRNA MGP_NODShiLtJ_T0026998.1 MGP_NODShiLtJ_G0017633.1 mouse_genomes_project 10 135208372 135239946 - MGP_NODShiLtJ_P0026998 Helb protein_coding protein_coding MGP_NODShiLtJ_T0026999.1 MGP_NODShiLtJ_G0017633.1 mouse_genomes_project 10 135209429 135218055 - Helb protein_coding retained_intron MGP_NODShiLtJ_T0027000.1 MGP_NODShiLtJ_G0017633.1 mouse_genomes_project 10 135209491 135239824 - MGP_NODShiLtJ_P0027000 Helb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026753.1 MGP_NODShiLtJ_G0017546.1 mouse_genomes_project 10 109562269 109682278 + MGP_NODShiLtJ_P0026753 Atp2b1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026754.1 MGP_NODShiLtJ_G0017546.1 mouse_genomes_project 10 109562732 109682279 + MGP_NODShiLtJ_P0026754 Atp2b1 protein_coding protein_coding MGP_NODShiLtJ_T0024992.1 MGP_NODShiLtJ_G0017088.1 mouse_genomes_project 10 58355246 58470206 - MGP_NODShiLtJ_P0024992 Cep85l protein_coding protein_coding MGP_NODShiLtJ_T0025174.1 MGP_NODShiLtJ_G0017140.1 mouse_genomes_project 10 67611267 67630754 - MGP_NODShiLtJ_P0025174 Eif4ebp2 protein_coding protein_coding MGP_NODShiLtJ_T0027418.1 MGP_NODShiLtJ_G0017806.1 mouse_genomes_project 10 146980293 146981351 - MGP_NODShiLtJ_P0027418 Olfr827 protein_coding protein_coding MGP_NODShiLtJ_T0024996.1 MGP_NODShiLtJ_G0017091.1 mouse_genomes_project 10 58644487 58741508 - MGP_NODShiLtJ_P0024996 Mcm9 protein_coding protein_coding MGP_NODShiLtJ_T0024997.1 MGP_NODShiLtJ_G0017091.1 mouse_genomes_project 10 58645482 58706983 - MGP_NODShiLtJ_P0024997 Mcm9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026493.1 MGP_NODShiLtJ_G0017477.1 mouse_genomes_project 10 96020674 96021125 - MGP_NODShiLtJ_P0026493 protein_coding protein_coding MGP_NODShiLtJ_T0003040.1 MGP_NODShiLtJ_G0002830.1 mouse_genomes_project 10 129283120 129297678 + Gm15723 antisense antisense MGP_NODShiLtJ_T0026055.1 MGP_NODShiLtJ_G0017359.1 mouse_genomes_project 10 88924220 88924657 - Adamtsl5 protein_coding processed_transcript MGP_NODShiLtJ_T0026056.1 MGP_NODShiLtJ_G0017359.1 mouse_genomes_project 10 88924364 88937659 - Adamtsl5 protein_coding retained_intron MGP_NODShiLtJ_T0026057.1 MGP_NODShiLtJ_G0017359.1 mouse_genomes_project 10 88924392 88930714 - Adamtsl5 protein_coding retained_intron MGP_NODShiLtJ_T0026058.1 MGP_NODShiLtJ_G0017359.1 mouse_genomes_project 10 88925412 88937659 - Adamtsl5 protein_coding retained_intron MGP_NODShiLtJ_T0026059.1 MGP_NODShiLtJ_G0017359.1 mouse_genomes_project 10 88925412 88937659 - MGP_NODShiLtJ_P0026059 Adamtsl5 protein_coding protein_coding MGP_NODShiLtJ_T0026060.1 MGP_NODShiLtJ_G0017359.1 mouse_genomes_project 10 88927310 88937659 - MGP_NODShiLtJ_P0026060 Adamtsl5 protein_coding protein_coding MGP_NODShiLtJ_T0026061.1 MGP_NODShiLtJ_G0017359.1 mouse_genomes_project 10 88927577 88929833 - Adamtsl5 protein_coding processed_transcript MGP_NODShiLtJ_T0025529.1 MGP_NODShiLtJ_G0017211.1 mouse_genomes_project 10 83197221 83302199 + MGP_NODShiLtJ_P0025529 Specc1l protein_coding protein_coding MGP_NODShiLtJ_T0025530.1 MGP_NODShiLtJ_G0017211.1 mouse_genomes_project 10 83217112 83302199 + MGP_NODShiLtJ_P0025530 Specc1l protein_coding protein_coding MGP_NODShiLtJ_T0097736.1 MGP_NODShiLtJ_G0036148.1 mouse_genomes_project 10 65165606 65170030 + pseudogene pseudogene MGP_NODShiLtJ_T0006081.1 MGP_NODShiLtJ_G0005075.1 mouse_genomes_project 10 104672764 104689221 - Cep83os lincRNA lincRNA MGP_NODShiLtJ_T0025905.1 MGP_NODShiLtJ_G0017326.1 mouse_genomes_project 10 88408755 88417344 + Prtn3 protein_coding processed_transcript MGP_NODShiLtJ_T0025906.1 MGP_NODShiLtJ_G0017326.1 mouse_genomes_project 10 88413893 88417477 + MGP_NODShiLtJ_P0025906 Prtn3 protein_coding protein_coding MGP_NODShiLtJ_T0025907.1 MGP_NODShiLtJ_G0017326.1 mouse_genomes_project 10 88415282 88417477 + Prtn3 protein_coding retained_intron MGP_NODShiLtJ_T0025908.1 MGP_NODShiLtJ_G0017326.1 mouse_genomes_project 10 88415306 88416692 + Prtn3 protein_coding retained_intron MGP_NODShiLtJ_T0025909.1 MGP_NODShiLtJ_G0017326.1 mouse_genomes_project 10 88415344 88417147 + MGP_NODShiLtJ_P0025909 Prtn3 protein_coding protein_coding MGP_NODShiLtJ_T0025910.1 MGP_NODShiLtJ_G0017326.1 mouse_genomes_project 10 88416085 88417183 + Prtn3 protein_coding retained_intron MGP_NODShiLtJ_T0011162.1 MGP_NODShiLtJ_G0009295.1 mouse_genomes_project 10 69256151 69256434 + Gm22803 misc_RNA misc_RNA MGP_NODShiLtJ_T0027353.1 MGP_NODShiLtJ_G0017756.1 mouse_genomes_project 10 145472393 145473584 - MGP_NODShiLtJ_P0027353 protein_coding protein_coding MGP_NODShiLtJ_T0024723.1 MGP_NODShiLtJ_G0017003.1 mouse_genomes_project 10 35666337 35694177 - Nt5dc1 protein_coding processed_transcript MGP_NODShiLtJ_T0024725.1 MGP_NODShiLtJ_G0017003.1 mouse_genomes_project 10 35683188 35802624 - MGP_NODShiLtJ_P0024725 Nt5dc1 protein_coding protein_coding MGP_NODShiLtJ_T0024726.1 MGP_NODShiLtJ_G0017003.1 mouse_genomes_project 10 35683188 35802611 - MGP_NODShiLtJ_P0024726 Nt5dc1 protein_coding protein_coding MGP_NODShiLtJ_T0024727.1 MGP_NODShiLtJ_G0017003.1 mouse_genomes_project 10 35683844 35802600 - Nt5dc1 protein_coding processed_transcript MGP_NODShiLtJ_T0024729.1 MGP_NODShiLtJ_G0017003.1 mouse_genomes_project 10 35781582 35802553 - MGP_NODShiLtJ_P0024729 Nt5dc1 protein_coding protein_coding MGP_NODShiLtJ_T0003028.1 MGP_NODShiLtJ_G0002823.1 mouse_genomes_project 10 97184404 97186390 - Igf1os antisense antisense MGP_NODShiLtJ_T0003029.1 MGP_NODShiLtJ_G0002823.1 mouse_genomes_project 10 97184416 97223595 - Igf1os antisense antisense MGP_NODShiLtJ_T0098654.1 MGP_NODShiLtJ_G0037048.1 mouse_genomes_project 10 124714111 124714214 - Gm22101 snRNA snRNA MGP_NODShiLtJ_T0009481.1 MGP_NODShiLtJ_G0007614.1 mouse_genomes_project 10 19568146 19568254 - Mir6413 miRNA miRNA MGP_NODShiLtJ_T0000801.1 MGP_NODShiLtJ_G0000732.1 mouse_genomes_project 10 89126324 89127139 + TEC TEC MGP_NODShiLtJ_T0026359.1 MGP_NODShiLtJ_G0017434.1 mouse_genomes_project 10 90637047 90638569 - MGP_NODShiLtJ_P0026359 protein_coding protein_coding MGP_NODShiLtJ_T0009500.1 MGP_NODShiLtJ_G0007633.1 mouse_genomes_project 10 68437966 68438027 - Mir7662 miRNA miRNA MGP_NODShiLtJ_T0024578.1 MGP_NODShiLtJ_G0016937.1 mouse_genomes_project 10 23498056 23501674 - MGP_NODShiLtJ_P0024578 Rps12 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024579.1 MGP_NODShiLtJ_G0016937.1 mouse_genomes_project 10 23498056 23501655 - MGP_NODShiLtJ_P0024579 Rps12 protein_coding protein_coding MGP_NODShiLtJ_T0024700.1 MGP_NODShiLtJ_G0016987.1 mouse_genomes_project 10 32248034 32375496 - MGP_NODShiLtJ_P0024700 Rnf217 protein_coding protein_coding MGP_NODShiLtJ_T0024292.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5076072 5109568 - MGP_NODShiLtJ_P0024292 Pcmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024293.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5076072 5109912 - MGP_NODShiLtJ_P0024293 Pcmt1 protein_coding protein_coding MGP_NODShiLtJ_T0024294.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5076080 5109607 - MGP_NODShiLtJ_P0024294 Pcmt1 protein_coding protein_coding MGP_NODShiLtJ_T0024295.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5081783 5094604 - MGP_NODShiLtJ_P0024295 Pcmt1 protein_coding protein_coding MGP_NODShiLtJ_T0024296.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5081783 5109565 - MGP_NODShiLtJ_P0024296 Pcmt1 protein_coding protein_coding MGP_NODShiLtJ_T0024297.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5083710 5109912 - Pcmt1 protein_coding retained_intron MGP_NODShiLtJ_T0024298.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5088498 5130204 - MGP_NODShiLtJ_P0024298 Pcmt1 protein_coding protein_coding MGP_NODShiLtJ_T0024299.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5093043 5098026 - MGP_NODShiLtJ_P0024299 Pcmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024300.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5093068 5130198 - MGP_NODShiLtJ_P0024300 Pcmt1 protein_coding protein_coding MGP_NODShiLtJ_T0024301.1 MGP_NODShiLtJ_G0016861.1 mouse_genomes_project 10 5094413 5109568 - Pcmt1 protein_coding retained_intron MGP_NODShiLtJ_T0024792.1 MGP_NODShiLtJ_G0017022.1 mouse_genomes_project 10 42391715 42416335 - MGP_NODShiLtJ_P0024792 Mfsd4b1 protein_coding protein_coding MGP_NODShiLtJ_T0024793.1 MGP_NODShiLtJ_G0017022.1 mouse_genomes_project 10 42397421 42416226 - Mfsd4b1 protein_coding processed_transcript MGP_NODShiLtJ_T0098633.1 MGP_NODShiLtJ_G0037027.1 mouse_genomes_project 10 88447930 88448037 + Gm24019 snRNA snRNA MGP_NODShiLtJ_T0027021.1 MGP_NODShiLtJ_G0017640.1 mouse_genomes_project 10 136156559 136219626 - MGP_NODShiLtJ_P0027021 Lemd3 protein_coding protein_coding MGP_NODShiLtJ_T0027022.1 MGP_NODShiLtJ_G0017640.1 mouse_genomes_project 10 136157205 136219626 - MGP_NODShiLtJ_P0027022 Lemd3 protein_coding protein_coding MGP_NODShiLtJ_T0000810.1 MGP_NODShiLtJ_G0000740.1 mouse_genomes_project 10 125452464 125452762 + TEC TEC MGP_NODShiLtJ_T0003030.1 MGP_NODShiLtJ_G0002824.1 mouse_genomes_project 10 97867014 97872666 - Gm16235 antisense antisense MGP_NODShiLtJ_T0003031.1 MGP_NODShiLtJ_G0002824.1 mouse_genomes_project 10 97867932 97868713 - Gm16235 antisense antisense MGP_NODShiLtJ_T0009524.1 MGP_NODShiLtJ_G0007657.1 mouse_genomes_project 10 95991410 95991543 - miRNA miRNA MGP_NODShiLtJ_T0009505.1 MGP_NODShiLtJ_G0007638.1 mouse_genomes_project 10 86648163 86648221 - Mir7659 miRNA miRNA MGP_NODShiLtJ_T0009510.1 MGP_NODShiLtJ_G0007643.1 mouse_genomes_project 10 88039832 88039894 - Mir6909 miRNA miRNA MGP_NODShiLtJ_T0012328.1 MGP_NODShiLtJ_G0010436.1 mouse_genomes_project 10 136161546 136162333 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025677.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85480875 85613194 - MGP_NODShiLtJ_P0025677 Adarb1 protein_coding protein_coding MGP_NODShiLtJ_T0025678.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85480875 85613189 - MGP_NODShiLtJ_P0025678 Adarb1 protein_coding protein_coding MGP_NODShiLtJ_T0025679.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85480876 85613194 - MGP_NODShiLtJ_P0025679 Adarb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025680.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85480876 85613151 - MGP_NODShiLtJ_P0025680 Adarb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025681.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85480876 85613151 - MGP_NODShiLtJ_P0025681 Adarb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025682.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85480877 85613194 - MGP_NODShiLtJ_P0025682 Adarb1 protein_coding protein_coding MGP_NODShiLtJ_T0025683.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85505979 85613135 - Adarb1 protein_coding retained_intron MGP_NODShiLtJ_T0025684.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85505993 85613189 - Adarb1 protein_coding retained_intron MGP_NODShiLtJ_T0025685.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85516520 85613162 - Adarb1 protein_coding retained_intron MGP_NODShiLtJ_T0025686.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85519067 85612778 - Adarb1 protein_coding retained_intron MGP_NODShiLtJ_T0025687.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85519258 85613141 - Adarb1 protein_coding retained_intron MGP_NODShiLtJ_T0025688.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85519444 85533927 - Adarb1 protein_coding retained_intron MGP_NODShiLtJ_T0025689.1 MGP_NODShiLtJ_G0017255.1 mouse_genomes_project 10 85519519 85565153 - Adarb1 protein_coding retained_intron MGP_NODShiLtJ_T0024945.1 MGP_NODShiLtJ_G0017070.1 mouse_genomes_project 10 48545679 48719970 + MGP_NODShiLtJ_P0024945 Hace1 protein_coding protein_coding MGP_NODShiLtJ_T0024946.1 MGP_NODShiLtJ_G0017070.1 mouse_genomes_project 10 48545948 48580792 + MGP_NODShiLtJ_P0024946 Hace1 protein_coding protein_coding MGP_NODShiLtJ_T0024947.1 MGP_NODShiLtJ_G0017070.1 mouse_genomes_project 10 48547260 48580746 + Hace1 protein_coding processed_transcript MGP_NODShiLtJ_T0024948.1 MGP_NODShiLtJ_G0017070.1 mouse_genomes_project 10 48558326 48632282 + Hace1 protein_coding processed_transcript MGP_NODShiLtJ_T0024949.1 MGP_NODShiLtJ_G0017070.1 mouse_genomes_project 10 48673434 48720019 + MGP_NODShiLtJ_P0024949 Hace1 protein_coding protein_coding MGP_NODShiLtJ_T0024950.1 MGP_NODShiLtJ_G0017070.1 mouse_genomes_project 10 48673664 48720019 + MGP_NODShiLtJ_P0024950 Hace1 protein_coding protein_coding MGP_NODShiLtJ_T0024951.1 MGP_NODShiLtJ_G0017070.1 mouse_genomes_project 10 48678223 48720980 + Hace1 protein_coding retained_intron MGP_NODShiLtJ_T0006099.1 MGP_NODShiLtJ_G0005087.1 mouse_genomes_project 10 134098971 134109471 + 1700064J06Rik lincRNA lincRNA MGP_NODShiLtJ_T0011165.1 MGP_NODShiLtJ_G0009298.1 mouse_genomes_project 10 86682885 86683193 - Gm22514 misc_RNA misc_RNA MGP_NODShiLtJ_T0024234.1 MGP_NODShiLtJ_G0016852.1 mouse_genomes_project 10 2743089 2751662 + MGP_NODShiLtJ_P0024234 Vip protein_coding protein_coding MGP_NODShiLtJ_T0026751.1 MGP_NODShiLtJ_G0017544.1 mouse_genomes_project 10 108087860 108089728 + MGP_NODShiLtJ_P0026751 Ccer1 protein_coding protein_coding MGP_NODShiLtJ_T0026446.1 MGP_NODShiLtJ_G0017463.1 mouse_genomes_project 10 94462814 94463795 + MGP_NODShiLtJ_P0026446 Gm8394 protein_coding protein_coding MGP_NODShiLtJ_T0026672.1 MGP_NODShiLtJ_G0017516.1 mouse_genomes_project 10 103466777 103512692 + MGP_NODShiLtJ_P0026672 Ccdc38 protein_coding protein_coding MGP_NODShiLtJ_T0026673.1 MGP_NODShiLtJ_G0017516.1 mouse_genomes_project 10 103476133 103482340 + Ccdc38 protein_coding retained_intron MGP_NODShiLtJ_T0026674.1 MGP_NODShiLtJ_G0017516.1 mouse_genomes_project 10 103481643 103482385 + Ccdc38 protein_coding retained_intron MGP_NODShiLtJ_T0026675.1 MGP_NODShiLtJ_G0017516.1 mouse_genomes_project 10 103481646 103511488 + Ccdc38 protein_coding processed_transcript MGP_NODShiLtJ_T0026676.1 MGP_NODShiLtJ_G0017516.1 mouse_genomes_project 10 103492095 103502508 + Ccdc38 protein_coding processed_transcript MGP_NODShiLtJ_T0025587.1 MGP_NODShiLtJ_G0017226.1 mouse_genomes_project 10 83871009 83874134 - MGP_NODShiLtJ_P0025587 Gstt2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025588.1 MGP_NODShiLtJ_G0017226.1 mouse_genomes_project 10 83871692 83874729 - MGP_NODShiLtJ_P0025588 Gstt2 protein_coding protein_coding MGP_NODShiLtJ_T0101534.1 MGP_NODShiLtJ_G0039704.1 mouse_genomes_project 10 146084834 146085597 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006008.1 MGP_NODShiLtJ_G0005027.1 mouse_genomes_project 10 9056603 9102213 - 4930432B10Rik lincRNA lincRNA MGP_NODShiLtJ_T0006009.1 MGP_NODShiLtJ_G0005027.1 mouse_genomes_project 10 9072821 9102435 - 4930432B10Rik lincRNA lincRNA MGP_NODShiLtJ_T0024575.1 MGP_NODShiLtJ_G0016935.1 mouse_genomes_project 10 22460516 22464325 - MGP_NODShiLtJ_P0024575 Tcf21 protein_coding protein_coding MGP_NODShiLtJ_T0006101.1 MGP_NODShiLtJ_G0005089.1 mouse_genomes_project 10 143367615 143375011 + F420014N23Rik lincRNA lincRNA MGP_NODShiLtJ_T0026044.1 MGP_NODShiLtJ_G0017357.1 mouse_genomes_project 10 88896860 88905782 - Pcsk4 protein_coding retained_intron MGP_NODShiLtJ_T0026045.1 MGP_NODShiLtJ_G0017357.1 mouse_genomes_project 10 88896860 88905784 - MGP_NODShiLtJ_P0026045 Pcsk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026046.1 MGP_NODShiLtJ_G0017357.1 mouse_genomes_project 10 88896860 88905827 - MGP_NODShiLtJ_P0026046 Pcsk4 protein_coding protein_coding MGP_NODShiLtJ_T0026047.1 MGP_NODShiLtJ_G0017357.1 mouse_genomes_project 10 88896864 88898705 - Pcsk4 protein_coding retained_intron MGP_NODShiLtJ_T0026048.1 MGP_NODShiLtJ_G0017357.1 mouse_genomes_project 10 88896864 88898704 - Pcsk4 protein_coding retained_intron MGP_NODShiLtJ_T0026049.1 MGP_NODShiLtJ_G0017357.1 mouse_genomes_project 10 88897699 88905728 - MGP_NODShiLtJ_P0026049 Pcsk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0012272.1 MGP_NODShiLtJ_G0010380.1 mouse_genomes_project 10 21550554 21550902 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101533.1 MGP_NODShiLtJ_G0039703.1 mouse_genomes_project 10 146037314 146038174 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006033.1 MGP_NODShiLtJ_G0005047.1 mouse_genomes_project 10 67151318 67158095 + Gm20611 lincRNA lincRNA MGP_NODShiLtJ_T0000799.1 MGP_NODShiLtJ_G0000730.1 mouse_genomes_project 10 85139297 85139975 - TEC TEC MGP_NODShiLtJ_T0026111.1 MGP_NODShiLtJ_G0017373.1 mouse_genomes_project 10 89273897 89289501 - MGP_NODShiLtJ_P0026111 Btbd2 protein_coding protein_coding MGP_NODShiLtJ_T0026112.1 MGP_NODShiLtJ_G0017373.1 mouse_genomes_project 10 89273897 89288924 - MGP_NODShiLtJ_P0026112 Btbd2 protein_coding protein_coding MGP_NODShiLtJ_T0026113.1 MGP_NODShiLtJ_G0017373.1 mouse_genomes_project 10 89273903 89275910 - Btbd2 protein_coding retained_intron MGP_NODShiLtJ_T0026114.1 MGP_NODShiLtJ_G0017373.1 mouse_genomes_project 10 89275411 89280196 - Btbd2 protein_coding retained_intron MGP_NODShiLtJ_T0026115.1 MGP_NODShiLtJ_G0017373.1 mouse_genomes_project 10 89275915 89288568 - MGP_NODShiLtJ_P0026115 Btbd2 protein_coding protein_coding MGP_NODShiLtJ_T0026006.1 MGP_NODShiLtJ_G0017348.1 mouse_genomes_project 10 88732105 88735214 + MGP_NODShiLtJ_P0026006 1600002K03Rik protein_coding protein_coding MGP_NODShiLtJ_T0025720.1 MGP_NODShiLtJ_G0017264.1 mouse_genomes_project 10 85945165 85945528 + MGP_NODShiLtJ_P0025720 Gm10142 protein_coding protein_coding MGP_NODShiLtJ_T0025213.1 MGP_NODShiLtJ_G0017154.1 mouse_genomes_project 10 68506292 68530991 + MGP_NODShiLtJ_P0025213 Tacr2 protein_coding protein_coding MGP_NODShiLtJ_T0026495.1 MGP_NODShiLtJ_G0017479.1 mouse_genomes_project 10 96132270 96314726 - MGP_NODShiLtJ_P0026495 Stab2 protein_coding protein_coding MGP_NODShiLtJ_T0026496.1 MGP_NODShiLtJ_G0017479.1 mouse_genomes_project 10 96132393 96186846 - MGP_NODShiLtJ_P0026496 Stab2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026497.1 MGP_NODShiLtJ_G0017479.1 mouse_genomes_project 10 96132674 96314582 - MGP_NODShiLtJ_P0026497 Stab2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026498.1 MGP_NODShiLtJ_G0017479.1 mouse_genomes_project 10 96162579 96172117 - Stab2 protein_coding retained_intron MGP_NODShiLtJ_T0026499.1 MGP_NODShiLtJ_G0017479.1 mouse_genomes_project 10 96164548 96180991 - Stab2 protein_coding retained_intron MGP_NODShiLtJ_T0026500.1 MGP_NODShiLtJ_G0017479.1 mouse_genomes_project 10 96214942 96237347 - Stab2 protein_coding processed_transcript MGP_NODShiLtJ_T0026501.1 MGP_NODShiLtJ_G0017479.1 mouse_genomes_project 10 96294575 96314713 - Stab2 protein_coding processed_transcript MGP_NODShiLtJ_T0026502.1 MGP_NODShiLtJ_G0017479.1 mouse_genomes_project 10 96296267 96314723 - Stab2 protein_coding processed_transcript MGP_NODShiLtJ_T0026868.1 MGP_NODShiLtJ_G0017587.1 mouse_genomes_project 10 125646637 125658417 - MGP_NODShiLtJ_P0026868 Glipr1 protein_coding protein_coding MGP_NODShiLtJ_T0026869.1 MGP_NODShiLtJ_G0017587.1 mouse_genomes_project 10 125646644 125665440 - MGP_NODShiLtJ_P0026869 Glipr1 protein_coding protein_coding MGP_NODShiLtJ_T0026870.1 MGP_NODShiLtJ_G0017587.1 mouse_genomes_project 10 125646649 125654652 - MGP_NODShiLtJ_P0026870 Glipr1 protein_coding protein_coding MGP_NODShiLtJ_T0026871.1 MGP_NODShiLtJ_G0017587.1 mouse_genomes_project 10 125654624 125665450 - Glipr1 protein_coding processed_transcript MGP_NODShiLtJ_T0026872.1 MGP_NODShiLtJ_G0017587.1 mouse_genomes_project 10 125654724 125656979 - Glipr1 protein_coding processed_transcript MGP_NODShiLtJ_T0006003.1 MGP_NODShiLtJ_G0005022.1 mouse_genomes_project 10 1374831 1379682 + Gm21781 lincRNA lincRNA MGP_NODShiLtJ_T0025869.1 MGP_NODShiLtJ_G0017319.1 mouse_genomes_project 10 88279534 88288000 - MGP_NODShiLtJ_P0025869 Rnf126 protein_coding protein_coding MGP_NODShiLtJ_T0098619.1 MGP_NODShiLtJ_G0037013.1 mouse_genomes_project 10 50111000 50111162 - Gm25650 snRNA snRNA MGP_NODShiLtJ_T0026834.1 MGP_NODShiLtJ_G0017577.1 mouse_genomes_project 10 121652985 122230021 - MGP_NODShiLtJ_P0026834 Syt1 protein_coding protein_coding MGP_NODShiLtJ_T0026835.1 MGP_NODShiLtJ_G0017577.1 mouse_genomes_project 10 121652989 122230028 - MGP_NODShiLtJ_P0026835 Syt1 protein_coding protein_coding MGP_NODShiLtJ_T0026836.1 MGP_NODShiLtJ_G0017577.1 mouse_genomes_project 10 121791200 121803140 - Syt1 protein_coding retained_intron MGP_NODShiLtJ_T0026837.1 MGP_NODShiLtJ_G0017577.1 mouse_genomes_project 10 121791256 122228122 - MGP_NODShiLtJ_P0026837 Syt1 protein_coding protein_coding MGP_NODShiLtJ_T0026838.1 MGP_NODShiLtJ_G0017577.1 mouse_genomes_project 10 122103690 122230008 - Syt1 protein_coding retained_intron MGP_NODShiLtJ_T0026839.1 MGP_NODShiLtJ_G0017577.1 mouse_genomes_project 10 122103907 122228111 - Syt1 protein_coding retained_intron MGP_NODShiLtJ_T0012331.1 MGP_NODShiLtJ_G0010439.1 mouse_genomes_project 10 144178793 144179088 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098661.1 MGP_NODShiLtJ_G0037055.1 mouse_genomes_project 10 145371105 145371205 + Gm25494 snRNA snRNA MGP_NODShiLtJ_T0026200.1 MGP_NODShiLtJ_G0017402.1 mouse_genomes_project 10 89859687 89869356 + MGP_NODShiLtJ_P0026200 Dapk3 protein_coding protein_coding MGP_NODShiLtJ_T0012269.1 MGP_NODShiLtJ_G0010377.1 mouse_genomes_project 10 19807622 19809210 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026073.1 MGP_NODShiLtJ_G0017363.1 mouse_genomes_project 10 89002777 89006547 - Uqcr11 protein_coding processed_transcript MGP_NODShiLtJ_T0026074.1 MGP_NODShiLtJ_G0017363.1 mouse_genomes_project 10 89002777 89006611 - MGP_NODShiLtJ_P0026074 Uqcr11 protein_coding protein_coding MGP_NODShiLtJ_T0026075.1 MGP_NODShiLtJ_G0017363.1 mouse_genomes_project 10 89002778 89006576 - Uqcr11 protein_coding processed_transcript MGP_NODShiLtJ_T0024712.1 MGP_NODShiLtJ_G0016994.1 mouse_genomes_project 10 35247953 35295230 - MGP_NODShiLtJ_P0024712 Zufsp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024713.1 MGP_NODShiLtJ_G0016994.1 mouse_genomes_project 10 35269147 35295206 - MGP_NODShiLtJ_P0024713 Zufsp protein_coding protein_coding MGP_NODShiLtJ_T0025818.1 MGP_NODShiLtJ_G0017304.1 mouse_genomes_project 10 87975094 87998279 + MGP_NODShiLtJ_P0025818 Vmn2r83 protein_coding protein_coding MGP_NODShiLtJ_T0027230.1 MGP_NODShiLtJ_G0017709.1 mouse_genomes_project 10 144370715 144409623 + MGP_NODShiLtJ_P0027230 Baz2a protein_coding protein_coding MGP_NODShiLtJ_T0027231.1 MGP_NODShiLtJ_G0017709.1 mouse_genomes_project 10 144370715 144409623 + MGP_NODShiLtJ_P0027231 Baz2a protein_coding protein_coding MGP_NODShiLtJ_T0099853.1 MGP_NODShiLtJ_G0038247.1 mouse_genomes_project 10 42685152 42685365 + Rnu3a snoRNA snoRNA MGP_NODShiLtJ_T0006045.1 MGP_NODShiLtJ_G0005055.1 mouse_genomes_project 10 73933090 73935766 + Gm26576 lincRNA lincRNA MGP_NODShiLtJ_T0098648.1 MGP_NODShiLtJ_G0037042.1 mouse_genomes_project 10 116302579 116302641 - Gm22339 snRNA snRNA MGP_NODShiLtJ_T0027104.1 MGP_NODShiLtJ_G0017670.1 mouse_genomes_project 10 143341960 143350156 - MGP_NODShiLtJ_P0027104 Slc26a10 protein_coding protein_coding MGP_NODShiLtJ_T0024597.1 MGP_NODShiLtJ_G0016950.1 mouse_genomes_project 10 23761926 23763123 + MGP_NODShiLtJ_P0024597 Taar7d protein_coding protein_coding MGP_NODShiLtJ_T0026486.1 MGP_NODShiLtJ_G0017475.1 mouse_genomes_project 10 95975312 95988054 - protein_coding retained_intron MGP_NODShiLtJ_T0026487.1 MGP_NODShiLtJ_G0017475.1 mouse_genomes_project 10 95975952 95991604 - MGP_NODShiLtJ_P0026487 protein_coding protein_coding MGP_NODShiLtJ_T0026488.1 MGP_NODShiLtJ_G0017475.1 mouse_genomes_project 10 95977514 95984524 - MGP_NODShiLtJ_P0026488 protein_coding protein_coding MGP_NODShiLtJ_T0026489.1 MGP_NODShiLtJ_G0017475.1 mouse_genomes_project 10 95979134 95980835 - protein_coding retained_intron MGP_NODShiLtJ_T0026490.1 MGP_NODShiLtJ_G0017475.1 mouse_genomes_project 10 95988031 95989188 - protein_coding retained_intron MGP_NODShiLtJ_T0025176.1 MGP_NODShiLtJ_G0017142.1 mouse_genomes_project 10 67659082 67776643 + MGP_NODShiLtJ_P0025176 Lrrc20 protein_coding protein_coding MGP_NODShiLtJ_T0027311.1 MGP_NODShiLtJ_G0017736.1 mouse_genomes_project 10 145019765 145035821 - MGP_NODShiLtJ_P0027311 Ikzf4 protein_coding protein_coding MGP_NODShiLtJ_T0027312.1 MGP_NODShiLtJ_G0017736.1 mouse_genomes_project 10 145021285 145035656 - MGP_NODShiLtJ_P0027312 Ikzf4 protein_coding protein_coding MGP_NODShiLtJ_T0027313.1 MGP_NODShiLtJ_G0017736.1 mouse_genomes_project 10 145021338 145035674 - MGP_NODShiLtJ_P0027313 Ikzf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027314.1 MGP_NODShiLtJ_G0017736.1 mouse_genomes_project 10 145022583 145034478 - MGP_NODShiLtJ_P0027314 Ikzf4 protein_coding protein_coding MGP_NODShiLtJ_T0027315.1 MGP_NODShiLtJ_G0017736.1 mouse_genomes_project 10 145030094 145035626 - MGP_NODShiLtJ_P0027315 Ikzf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027316.1 MGP_NODShiLtJ_G0017736.1 mouse_genomes_project 10 145031010 145035620 - MGP_NODShiLtJ_P0027316 Ikzf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027317.1 MGP_NODShiLtJ_G0017736.1 mouse_genomes_project 10 145031036 145035637 - MGP_NODShiLtJ_P0027317 Ikzf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027318.1 MGP_NODShiLtJ_G0017736.1 mouse_genomes_project 10 145034267 145035656 - Ikzf4 protein_coding processed_transcript MGP_NODShiLtJ_T0006087.1 MGP_NODShiLtJ_G0005079.1 mouse_genomes_project 10 114723820 114724683 - Gm17028 lincRNA lincRNA MGP_NODShiLtJ_T0024989.1 MGP_NODShiLtJ_G0017086.1 mouse_genomes_project 10 57402972 57426532 + MGP_NODShiLtJ_P0024989 Nus1 protein_coding protein_coding MGP_NODShiLtJ_T0024990.1 MGP_NODShiLtJ_G0017086.1 mouse_genomes_project 10 57414350 57418792 + MGP_NODShiLtJ_P0024990 Nus1 protein_coding protein_coding MGP_NODShiLtJ_T0027005.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135337715 135339332 + Tmbim4 protein_coding processed_transcript MGP_NODShiLtJ_T0027006.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135337737 135339325 + Tmbim4 protein_coding processed_transcript MGP_NODShiLtJ_T0027007.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135337783 135357218 + MGP_NODShiLtJ_P0027007 Tmbim4 protein_coding protein_coding MGP_NODShiLtJ_T0027008.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135338776 135339325 + Tmbim4 protein_coding processed_transcript MGP_NODShiLtJ_T0027009.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135347373 135365278 + MGP_NODShiLtJ_P0027009 Tmbim4 protein_coding protein_coding MGP_NODShiLtJ_T0027010.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135347403 135357373 + MGP_NODShiLtJ_P0027010 Tmbim4 protein_coding protein_coding MGP_NODShiLtJ_T0027011.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135347416 135365200 + MGP_NODShiLtJ_P0027011 Tmbim4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027012.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135361150 135365100 + Tmbim4 protein_coding retained_intron MGP_NODShiLtJ_T0027013.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135362290 135364633 + Tmbim4 protein_coding retained_intron MGP_NODShiLtJ_T0027014.1 MGP_NODShiLtJ_G0017635.1 mouse_genomes_project 10 135362290 135365278 + Tmbim4 protein_coding retained_intron MGP_NODShiLtJ_T0025015.1 MGP_NODShiLtJ_G0017097.1 mouse_genomes_project 10 61984795 61999248 + MGP_NODShiLtJ_P0025015 Gja1 protein_coding protein_coding MGP_NODShiLtJ_T0098609.1 MGP_NODShiLtJ_G0037003.1 mouse_genomes_project 10 29826253 29826360 + Gm25596 snRNA snRNA MGP_NODShiLtJ_T0098630.1 MGP_NODShiLtJ_G0037024.1 mouse_genomes_project 10 74302294 74302395 - Gm26359 snRNA snRNA MGP_NODShiLtJ_T0025877.1 MGP_NODShiLtJ_G0017322.1 mouse_genomes_project 10 88318580 88347419 + MGP_NODShiLtJ_P0025877 Palm protein_coding protein_coding MGP_NODShiLtJ_T0025878.1 MGP_NODShiLtJ_G0017322.1 mouse_genomes_project 10 88318580 88347419 + MGP_NODShiLtJ_P0025878 Palm protein_coding protein_coding MGP_NODShiLtJ_T0025879.1 MGP_NODShiLtJ_G0017322.1 mouse_genomes_project 10 88318744 88346084 + MGP_NODShiLtJ_P0025879 Palm protein_coding unknown_likely_coding MGP_NODShiLtJ_T0002981.1 MGP_NODShiLtJ_G0002784.1 mouse_genomes_project 10 44340091 44347259 + BC048559 antisense antisense MGP_NODShiLtJ_T0026123.1 MGP_NODShiLtJ_G0017378.1 mouse_genomes_project 10 89396603 89438362 + MGP_NODShiLtJ_P0026123 Dot1l protein_coding protein_coding MGP_NODShiLtJ_T0026124.1 MGP_NODShiLtJ_G0017378.1 mouse_genomes_project 10 89396605 89437288 + MGP_NODShiLtJ_P0026124 Dot1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026125.1 MGP_NODShiLtJ_G0017378.1 mouse_genomes_project 10 89396860 89407980 + Dot1l protein_coding retained_intron MGP_NODShiLtJ_T0026126.1 MGP_NODShiLtJ_G0017378.1 mouse_genomes_project 10 89420508 89437292 + MGP_NODShiLtJ_P0026126 Dot1l protein_coding protein_coding MGP_NODShiLtJ_T0026127.1 MGP_NODShiLtJ_G0017378.1 mouse_genomes_project 10 89428116 89429374 + Dot1l protein_coding retained_intron MGP_NODShiLtJ_T0026128.1 MGP_NODShiLtJ_G0017378.1 mouse_genomes_project 10 89432015 89437248 + MGP_NODShiLtJ_P0026128 Dot1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026129.1 MGP_NODShiLtJ_G0017378.1 mouse_genomes_project 10 89434354 89436719 + MGP_NODShiLtJ_P0026129 Dot1l protein_coding protein_coding MGP_NODShiLtJ_T0098631.1 MGP_NODShiLtJ_G0037025.1 mouse_genomes_project 10 83643183 83643296 - Gm26402 snRNA snRNA MGP_NODShiLtJ_T0098643.1 MGP_NODShiLtJ_G0037037.1 mouse_genomes_project 10 100122308 100122403 + Gm22602 snRNA snRNA MGP_NODShiLtJ_T0025628.1 MGP_NODShiLtJ_G0017241.1 mouse_genomes_project 10 84561724 84573422 + MGP_NODShiLtJ_P0025628 2610028H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0098652.1 MGP_NODShiLtJ_G0037046.1 mouse_genomes_project 10 122686643 122686749 - Gm23041 snRNA snRNA MGP_NODShiLtJ_T0025210.1 MGP_NODShiLtJ_G0017152.1 mouse_genomes_project 10 68370566 68372240 + MGP_NODShiLtJ_P0025210 Neurog3 protein_coding protein_coding MGP_NODShiLtJ_T0026358.1 MGP_NODShiLtJ_G0017433.1 mouse_genomes_project 10 90498981 90500503 - MGP_NODShiLtJ_P0026358 protein_coding protein_coding MGP_NODShiLtJ_T0024920.1 MGP_NODShiLtJ_G0017058.1 mouse_genomes_project 10 46296725 46316156 - MGP_NODShiLtJ_P0024920 1700021F05Rik protein_coding protein_coding MGP_NODShiLtJ_T0024921.1 MGP_NODShiLtJ_G0017058.1 mouse_genomes_project 10 46296737 46316130 - MGP_NODShiLtJ_P0024921 1700021F05Rik protein_coding protein_coding MGP_NODShiLtJ_T0024922.1 MGP_NODShiLtJ_G0017058.1 mouse_genomes_project 10 46296763 46297448 - 1700021F05Rik protein_coding processed_transcript MGP_NODShiLtJ_T0024923.1 MGP_NODShiLtJ_G0017058.1 mouse_genomes_project 10 46306633 46316156 - 1700021F05Rik protein_coding processed_transcript MGP_NODShiLtJ_T0026223.1 MGP_NODShiLtJ_G0017407.1 mouse_genomes_project 10 89946973 89949195 - MGP_NODShiLtJ_P0026223 Mrpl54 protein_coding protein_coding MGP_NODShiLtJ_T0026224.1 MGP_NODShiLtJ_G0017407.1 mouse_genomes_project 10 89947690 89949185 - Mrpl54 protein_coding retained_intron MGP_NODShiLtJ_T0026201.1 MGP_NODShiLtJ_G0017403.1 mouse_genomes_project 10 89874519 89878387 - MGP_NODShiLtJ_P0026201 Nmrk2 protein_coding protein_coding MGP_NODShiLtJ_T0027163.1 MGP_NODShiLtJ_G0017686.1 mouse_genomes_project 10 143742287 143747642 - MGP_NODShiLtJ_P0027163 Shmt2 protein_coding protein_coding MGP_NODShiLtJ_T0097884.1 MGP_NODShiLtJ_G0036296.1 mouse_genomes_project 10 104831279 104831406 - Gm24186 rRNA rRNA MGP_NODShiLtJ_T0099872.1 MGP_NODShiLtJ_G0038266.1 mouse_genomes_project 10 102545541 102545684 - Gm24241 snoRNA snoRNA MGP_NODShiLtJ_T0024499.1 MGP_NODShiLtJ_G0016912.1 mouse_genomes_project 10 18830881 18844621 + MGP_NODShiLtJ_P0024499 Il22ra2 protein_coding protein_coding MGP_NODShiLtJ_T0025822.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88049180 88064026 - MGP_NODShiLtJ_P0025822 Mier2 protein_coding protein_coding MGP_NODShiLtJ_T0025823.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88049180 88064134 - MGP_NODShiLtJ_P0025823 Mier2 protein_coding protein_coding MGP_NODShiLtJ_T0025824.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88049181 88050896 - MGP_NODShiLtJ_P0025824 Mier2 protein_coding protein_coding MGP_NODShiLtJ_T0025825.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88049856 88051101 - Mier2 protein_coding retained_intron MGP_NODShiLtJ_T0025826.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88050603 88053706 - Mier2 protein_coding retained_intron MGP_NODShiLtJ_T0025827.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88051402 88053288 - Mier2 protein_coding processed_transcript MGP_NODShiLtJ_T0025828.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88057737 88064049 - MGP_NODShiLtJ_P0025828 Mier2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025829.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88057809 88063819 - MGP_NODShiLtJ_P0025829 Mier2 protein_coding protein_coding MGP_NODShiLtJ_T0025830.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88057816 88064056 - MGP_NODShiLtJ_P0025830 Mier2 protein_coding protein_coding MGP_NODShiLtJ_T0025831.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88057841 88059745 - MGP_NODShiLtJ_P0025831 Mier2 protein_coding protein_coding MGP_NODShiLtJ_T0025832.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88058493 88064012 - MGP_NODShiLtJ_P0025832 Mier2 protein_coding protein_coding MGP_NODShiLtJ_T0025833.1 MGP_NODShiLtJ_G0017306.1 mouse_genomes_project 10 88058571 88063540 - MGP_NODShiLtJ_P0025833 Mier2 protein_coding protein_coding MGP_NODShiLtJ_T0099869.1 MGP_NODShiLtJ_G0038263.1 mouse_genomes_project 10 86175905 86175959 - Gm22871 snoRNA snoRNA MGP_NODShiLtJ_T0098634.1 MGP_NODShiLtJ_G0037028.1 mouse_genomes_project 10 88529574 88529681 + Gm26243 snRNA snRNA MGP_NODShiLtJ_T0026878.1 MGP_NODShiLtJ_G0017591.1 mouse_genomes_project 10 125997226 126202822 + MGP_NODShiLtJ_P0026878 Kcnc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024961.1 MGP_NODShiLtJ_G0017074.1 mouse_genomes_project 10 56372385 56396544 + MGP_NODShiLtJ_P0024961 Lilr4b protein_coding protein_coding MGP_NODShiLtJ_T0024962.1 MGP_NODShiLtJ_G0017074.1 mouse_genomes_project 10 56372385 56396528 + MGP_NODShiLtJ_P0024962 Lilr4b protein_coding protein_coding MGP_NODShiLtJ_T0024963.1 MGP_NODShiLtJ_G0017074.1 mouse_genomes_project 10 56372407 56375433 + MGP_NODShiLtJ_P0024963 Lilr4b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024964.1 MGP_NODShiLtJ_G0017074.1 mouse_genomes_project 10 56372651 56375538 + MGP_NODShiLtJ_P0024964 Lilr4b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024967.1 MGP_NODShiLtJ_G0017074.1 mouse_genomes_project 10 56381784 56396544 + MGP_NODShiLtJ_P0024967 Lilr4b protein_coding protein_coding MGP_NODShiLtJ_T0024965.1 MGP_NODShiLtJ_G0017075.1 mouse_genomes_project 10 56381696 56396528 + MGP_NODShiLtJ_P0024965 protein_coding protein_coding MGP_NODShiLtJ_T0024966.1 MGP_NODShiLtJ_G0017075.1 mouse_genomes_project 10 56381742 56391260 + protein_coding processed_transcript MGP_NODShiLtJ_T0024405.1 MGP_NODShiLtJ_G0016887.1 mouse_genomes_project 10 11204074 11324889 - MGP_NODShiLtJ_P0024405 Phactr2 protein_coding protein_coding MGP_NODShiLtJ_T0024406.1 MGP_NODShiLtJ_G0016887.1 mouse_genomes_project 10 11209697 11392989 - MGP_NODShiLtJ_P0024406 Phactr2 protein_coding protein_coding MGP_NODShiLtJ_T0024407.1 MGP_NODShiLtJ_G0016887.1 mouse_genomes_project 10 11209697 11487301 - MGP_NODShiLtJ_P0024407 Phactr2 protein_coding protein_coding MGP_NODShiLtJ_T0024408.1 MGP_NODShiLtJ_G0016887.1 mouse_genomes_project 10 11209699 11325018 - MGP_NODShiLtJ_P0024408 Phactr2 protein_coding protein_coding MGP_NODShiLtJ_T0024409.1 MGP_NODShiLtJ_G0016887.1 mouse_genomes_project 10 11210560 11393206 - MGP_NODShiLtJ_P0024409 Phactr2 protein_coding protein_coding MGP_NODShiLtJ_T0024410.1 MGP_NODShiLtJ_G0016887.1 mouse_genomes_project 10 11384189 11392967 - Phactr2 protein_coding processed_transcript MGP_NODShiLtJ_T0027372.1 MGP_NODShiLtJ_G0017769.1 mouse_genomes_project 10 145871764 145872724 + MGP_NODShiLtJ_P0027372 Olfr801 protein_coding protein_coding MGP_NODShiLtJ_T0024728.1 MGP_NODShiLtJ_G0017005.1 mouse_genomes_project 10 35774533 35781600 + MGP_NODShiLtJ_P0024728 Col10a1 protein_coding protein_coding MGP_NODShiLtJ_T0026179.1 MGP_NODShiLtJ_G0017397.1 mouse_genomes_project 10 89763161 89787563 + MGP_NODShiLtJ_P0026179 Map2k2 protein_coding protein_coding MGP_NODShiLtJ_T0026180.1 MGP_NODShiLtJ_G0017397.1 mouse_genomes_project 10 89763193 89786749 + MGP_NODShiLtJ_P0026180 Map2k2 protein_coding protein_coding MGP_NODShiLtJ_T0026181.1 MGP_NODShiLtJ_G0017397.1 mouse_genomes_project 10 89763218 89786711 + MGP_NODShiLtJ_P0026181 Map2k2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026182.1 MGP_NODShiLtJ_G0017397.1 mouse_genomes_project 10 89763591 89781991 + MGP_NODShiLtJ_P0026182 Map2k2 protein_coding protein_coding MGP_NODShiLtJ_T0026183.1 MGP_NODShiLtJ_G0017397.1 mouse_genomes_project 10 89781477 89782193 + Map2k2 protein_coding retained_intron MGP_NODShiLtJ_T0026184.1 MGP_NODShiLtJ_G0017397.1 mouse_genomes_project 10 89783719 89785428 + Map2k2 protein_coding retained_intron MGP_NODShiLtJ_T0026185.1 MGP_NODShiLtJ_G0017397.1 mouse_genomes_project 10 89785025 89786793 + Map2k2 protein_coding retained_intron MGP_NODShiLtJ_T0097734.1 MGP_NODShiLtJ_G0036146.1 mouse_genomes_project 10 46800890 46801438 + pseudogene pseudogene MGP_NODShiLtJ_T0003045.1 MGP_NODShiLtJ_G0002833.1 mouse_genomes_project 10 134493612 134519217 - Grip1os3 antisense antisense MGP_NODShiLtJ_T0003046.1 MGP_NODShiLtJ_G0002833.1 mouse_genomes_project 10 134503096 134519167 - Grip1os3 antisense antisense MGP_NODShiLtJ_T0003047.1 MGP_NODShiLtJ_G0002833.1 mouse_genomes_project 10 134503096 134519766 - Grip1os3 antisense antisense MGP_NODShiLtJ_T0026937.1 MGP_NODShiLtJ_G0017613.1 mouse_genomes_project 10 131771376 131772804 + MGP_NODShiLtJ_P0026937 Lrrc10 protein_coding protein_coding MGP_NODShiLtJ_T0009507.1 MGP_NODShiLtJ_G0007640.1 mouse_genomes_project 10 86757514 86757618 + Mir6410 miRNA miRNA MGP_NODShiLtJ_T0025853.1 MGP_NODShiLtJ_G0017316.1 mouse_genomes_project 10 88236561 88255955 + MGP_NODShiLtJ_P0025853 Hcn2 protein_coding protein_coding MGP_NODShiLtJ_T0025854.1 MGP_NODShiLtJ_G0017316.1 mouse_genomes_project 10 88236776 88255955 + MGP_NODShiLtJ_P0025854 Hcn2 protein_coding protein_coding MGP_NODShiLtJ_T0006083.1 MGP_NODShiLtJ_G0005077.1 mouse_genomes_project 10 105853680 105909033 + 4732465J04Rik lincRNA lincRNA MGP_NODShiLtJ_T0006084.1 MGP_NODShiLtJ_G0005077.1 mouse_genomes_project 10 105890368 105909438 + 4732465J04Rik lincRNA lincRNA MGP_NODShiLtJ_T0027162.1 MGP_NODShiLtJ_G0017685.1 mouse_genomes_project 10 143740104 143742317 + MGP_NODShiLtJ_P0027162 Ndufa4l2 protein_coding protein_coding MGP_NODShiLtJ_T0025347.1 MGP_NODShiLtJ_G0017186.1 mouse_genomes_project 10 74985101 75014170 - MGP_NODShiLtJ_P0025347 Zfp365 protein_coding protein_coding MGP_NODShiLtJ_T0025348.1 MGP_NODShiLtJ_G0017186.1 mouse_genomes_project 10 74985166 75002798 - Zfp365 protein_coding processed_transcript MGP_NODShiLtJ_T0025349.1 MGP_NODShiLtJ_G0017186.1 mouse_genomes_project 10 74990050 75000477 - Zfp365 protein_coding processed_transcript MGP_NODShiLtJ_T0025350.1 MGP_NODShiLtJ_G0017186.1 mouse_genomes_project 10 74998174 75013943 - Zfp365 protein_coding retained_intron MGP_NODShiLtJ_T0027133.1 MGP_NODShiLtJ_G0017679.1 mouse_genomes_project 10 143508133 143514343 + MGP_NODShiLtJ_P0027133 Arhgap9 protein_coding protein_coding MGP_NODShiLtJ_T0026723.1 MGP_NODShiLtJ_G0017528.1 mouse_genomes_project 10 104689397 104800135 + MGP_NODShiLtJ_P0026723 Cep83 protein_coding protein_coding MGP_NODShiLtJ_T0025382.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76825653 77203795 + protein_coding retained_intron MGP_NODShiLtJ_T0025383.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76825653 77030662 + protein_coding processed_transcript MGP_NODShiLtJ_T0025384.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76825653 77367892 + MGP_NODShiLtJ_P0025384 protein_coding protein_coding MGP_NODShiLtJ_T0025385.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76825696 77181338 + protein_coding retained_intron MGP_NODShiLtJ_T0025386.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76825724 77365079 + MGP_NODShiLtJ_P0025386 protein_coding protein_coding MGP_NODShiLtJ_T0025387.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76825728 77365334 + MGP_NODShiLtJ_P0025387 protein_coding protein_coding MGP_NODShiLtJ_T0025388.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76825728 77365334 + MGP_NODShiLtJ_P0025388 protein_coding protein_coding MGP_NODShiLtJ_T0025389.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76825946 77152317 + MGP_NODShiLtJ_P0025389 protein_coding protein_coding MGP_NODShiLtJ_T0025390.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76826089 77364323 + MGP_NODShiLtJ_P0025390 protein_coding protein_coding MGP_NODShiLtJ_T0025391.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76826103 77356104 + MGP_NODShiLtJ_P0025391 protein_coding protein_coding MGP_NODShiLtJ_T0025392.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76826103 77356104 + MGP_NODShiLtJ_P0025392 protein_coding protein_coding MGP_NODShiLtJ_T0025393.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76826103 77356104 + MGP_NODShiLtJ_P0025393 protein_coding protein_coding MGP_NODShiLtJ_T0025394.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76826103 77356104 + MGP_NODShiLtJ_P0025394 protein_coding protein_coding MGP_NODShiLtJ_T0025395.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 76826103 77356104 + MGP_NODShiLtJ_P0025395 protein_coding protein_coding MGP_NODShiLtJ_T0025396.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77016159 77020335 + protein_coding retained_intron MGP_NODShiLtJ_T0025397.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77016227 77356102 + MGP_NODShiLtJ_P0025397 protein_coding protein_coding MGP_NODShiLtJ_T0025398.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77016331 77333390 + protein_coding retained_intron MGP_NODShiLtJ_T0025399.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77016335 77149874 + protein_coding retained_intron MGP_NODShiLtJ_T0025400.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77109973 77134774 + protein_coding retained_intron MGP_NODShiLtJ_T0025401.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77109984 77189990 + MGP_NODShiLtJ_P0025401 protein_coding protein_coding MGP_NODShiLtJ_T0025402.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77111902 77180760 + MGP_NODShiLtJ_P0025402 protein_coding protein_coding MGP_NODShiLtJ_T0025403.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77230642 77364378 + MGP_NODShiLtJ_P0025403 protein_coding protein_coding MGP_NODShiLtJ_T0025404.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77231584 77310626 + MGP_NODShiLtJ_P0025404 protein_coding protein_coding MGP_NODShiLtJ_T0025405.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77246907 77288659 + protein_coding retained_intron MGP_NODShiLtJ_T0025406.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258254 77259098 + protein_coding retained_intron MGP_NODShiLtJ_T0025407.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258254 77364414 + MGP_NODShiLtJ_P0025407 protein_coding protein_coding MGP_NODShiLtJ_T0025408.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258291 77365406 + MGP_NODShiLtJ_P0025408 protein_coding protein_coding MGP_NODShiLtJ_T0025409.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258532 77365334 + MGP_NODShiLtJ_P0025409 protein_coding protein_coding MGP_NODShiLtJ_T0025410.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258532 77365334 + MGP_NODShiLtJ_P0025410 protein_coding protein_coding MGP_NODShiLtJ_T0025411.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258532 77365334 + MGP_NODShiLtJ_P0025411 protein_coding protein_coding MGP_NODShiLtJ_T0025412.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258564 77356276 + MGP_NODShiLtJ_P0025412 protein_coding protein_coding MGP_NODShiLtJ_T0025413.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258578 77332659 + protein_coding retained_intron MGP_NODShiLtJ_T0025414.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258713 77365095 + MGP_NODShiLtJ_P0025414 protein_coding protein_coding MGP_NODShiLtJ_T0025415.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258839 77365079 + MGP_NODShiLtJ_P0025415 protein_coding protein_coding MGP_NODShiLtJ_T0025416.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77258892 77364452 + MGP_NODShiLtJ_P0025416 protein_coding protein_coding MGP_NODShiLtJ_T0025417.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77310537 77320459 + protein_coding retained_intron MGP_NODShiLtJ_T0025418.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77316655 77337550 + MGP_NODShiLtJ_P0025418 protein_coding protein_coding MGP_NODShiLtJ_T0025419.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77317546 77324259 + MGP_NODShiLtJ_P0025419 protein_coding protein_coding MGP_NODShiLtJ_T0025420.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77318508 77365334 + MGP_NODShiLtJ_P0025420 protein_coding protein_coding MGP_NODShiLtJ_T0025421.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77320280 77337755 + protein_coding retained_intron MGP_NODShiLtJ_T0025422.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77325997 77365081 + MGP_NODShiLtJ_P0025422 protein_coding protein_coding MGP_NODShiLtJ_T0025423.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77328083 77364900 + MGP_NODShiLtJ_P0025423 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025424.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77330239 77336220 + MGP_NODShiLtJ_P0025424 protein_coding protein_coding MGP_NODShiLtJ_T0025425.1 MGP_NODShiLtJ_G0017194.1 mouse_genomes_project 10 77332451 77342773 + protein_coding retained_intron MGP_NODShiLtJ_T0002997.1 MGP_NODShiLtJ_G0002797.1 mouse_genomes_project 10 77653643 77654357 - Gm7097 antisense antisense MGP_NODShiLtJ_T0024539.1 MGP_NODShiLtJ_G0016924.1 mouse_genomes_project 10 20494832 20535191 - MGP_NODShiLtJ_P0024539 Myb protein_coding protein_coding MGP_NODShiLtJ_T0024540.1 MGP_NODShiLtJ_G0016924.1 mouse_genomes_project 10 20495173 20535191 - MGP_NODShiLtJ_P0024540 Myb protein_coding protein_coding MGP_NODShiLtJ_T0024541.1 MGP_NODShiLtJ_G0016924.1 mouse_genomes_project 10 20511596 20535136 - Myb protein_coding retained_intron MGP_NODShiLtJ_T0026100.1 MGP_NODShiLtJ_G0017368.1 mouse_genomes_project 10 89188441 89198631 - MGP_NODShiLtJ_P0026100 Klf16 protein_coding protein_coding MGP_NODShiLtJ_T0017006.1 MGP_NODShiLtJ_G0015008.1 mouse_genomes_project 10 88380670 88384246 - E130317F20Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0006054.1 MGP_NODShiLtJ_G0005062.1 mouse_genomes_project 10 90325698 90329093 - Gm26896 lincRNA lincRNA MGP_NODShiLtJ_T0026818.1 MGP_NODShiLtJ_G0017568.1 mouse_genomes_project 10 118316869 118323635 + Ccdc59 protein_coding retained_intron MGP_NODShiLtJ_T0026819.1 MGP_NODShiLtJ_G0017568.1 mouse_genomes_project 10 118316869 118323635 + MGP_NODShiLtJ_P0026819 Ccdc59 protein_coding protein_coding MGP_NODShiLtJ_T0026820.1 MGP_NODShiLtJ_G0017568.1 mouse_genomes_project 10 118317306 118318785 + Ccdc59 protein_coding retained_intron MGP_NODShiLtJ_T0024332.1 MGP_NODShiLtJ_G0016871.1 mouse_genomes_project 10 7117637 7120789 - MGP_NODShiLtJ_P0024332 Gm9930 protein_coding protein_coding MGP_NODShiLtJ_T0002982.1 MGP_NODShiLtJ_G0002785.1 mouse_genomes_project 10 45388991 45389474 - Gm15200 antisense antisense MGP_NODShiLtJ_T0025544.1 MGP_NODShiLtJ_G0017215.1 mouse_genomes_project 10 83543194 83563049 + MGP_NODShiLtJ_P0025544 Snrpd3 protein_coding protein_coding MGP_NODShiLtJ_T0025545.1 MGP_NODShiLtJ_G0017215.1 mouse_genomes_project 10 83543657 83545510 + Snrpd3 protein_coding retained_intron MGP_NODShiLtJ_T0024430.1 MGP_NODShiLtJ_G0016892.1 mouse_genomes_project 10 12034476 12232592 + MGP_NODShiLtJ_P0024430 Hivep2 protein_coding protein_coding MGP_NODShiLtJ_T0024431.1 MGP_NODShiLtJ_G0016892.1 mouse_genomes_project 10 12034780 12233377 + MGP_NODShiLtJ_P0024431 Hivep2 protein_coding protein_coding MGP_NODShiLtJ_T0024432.1 MGP_NODShiLtJ_G0016892.1 mouse_genomes_project 10 12034780 12233376 + MGP_NODShiLtJ_P0024432 Hivep2 protein_coding protein_coding MGP_NODShiLtJ_T0024433.1 MGP_NODShiLtJ_G0016892.1 mouse_genomes_project 10 12035045 12208849 + MGP_NODShiLtJ_P0024433 Hivep2 protein_coding protein_coding MGP_NODShiLtJ_T0024434.1 MGP_NODShiLtJ_G0016892.1 mouse_genomes_project 10 12035415 12076444 + Hivep2 protein_coding retained_intron MGP_NODShiLtJ_T0024435.1 MGP_NODShiLtJ_G0016892.1 mouse_genomes_project 10 12035478 12155076 + Hivep2 protein_coding processed_transcript MGP_NODShiLtJ_T0012279.1 MGP_NODShiLtJ_G0010387.1 mouse_genomes_project 10 32405305 32406608 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012323.1 MGP_NODShiLtJ_G0010431.1 mouse_genomes_project 10 117950310 117951234 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026589.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 99495394 100675729 + MGP_NODShiLtJ_P0026589 protein_coding protein_coding MGP_NODShiLtJ_T0026590.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 99495423 100183116 + MGP_NODShiLtJ_P0026590 protein_coding protein_coding MGP_NODShiLtJ_T0026591.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 99495523 100671902 + MGP_NODShiLtJ_P0026591 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026592.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 99495557 100365550 + MGP_NODShiLtJ_P0026592 protein_coding protein_coding MGP_NODShiLtJ_T0026593.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 99615768 99659378 + protein_coding processed_transcript MGP_NODShiLtJ_T0026594.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 99674221 99696323 + protein_coding processed_transcript MGP_NODShiLtJ_T0026595.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 99696355 99704543 + MGP_NODShiLtJ_P0026595 protein_coding protein_coding MGP_NODShiLtJ_T0026596.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100252198 100678419 + MGP_NODShiLtJ_P0026596 protein_coding protein_coding MGP_NODShiLtJ_T0026597.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100252718 100622916 + MGP_NODShiLtJ_P0026597 protein_coding protein_coding MGP_NODShiLtJ_T0026598.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100252842 100675768 + MGP_NODShiLtJ_P0026598 protein_coding protein_coding MGP_NODShiLtJ_T0026599.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100252980 100676578 + MGP_NODShiLtJ_P0026599 protein_coding protein_coding MGP_NODShiLtJ_T0026600.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253034 100676821 + MGP_NODShiLtJ_P0026600 protein_coding protein_coding MGP_NODShiLtJ_T0026601.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253076 100675722 + MGP_NODShiLtJ_P0026601 protein_coding protein_coding MGP_NODShiLtJ_T0026602.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253155 100676288 + MGP_NODShiLtJ_P0026602 protein_coding protein_coding MGP_NODShiLtJ_T0026603.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253182 100676783 + MGP_NODShiLtJ_P0026603 protein_coding protein_coding MGP_NODShiLtJ_T0026604.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253200 100676821 + MGP_NODShiLtJ_P0026604 protein_coding protein_coding MGP_NODShiLtJ_T0026605.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253213 100277718 + protein_coding processed_transcript MGP_NODShiLtJ_T0026606.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253214 100264905 + MGP_NODShiLtJ_P0026606 protein_coding protein_coding MGP_NODShiLtJ_T0026607.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253230 100265052 + MGP_NODShiLtJ_P0026607 protein_coding protein_coding MGP_NODShiLtJ_T0026608.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253265 100676288 + MGP_NODShiLtJ_P0026608 protein_coding protein_coding MGP_NODShiLtJ_T0026609.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253279 100677110 + MGP_NODShiLtJ_P0026609 protein_coding protein_coding MGP_NODShiLtJ_T0026610.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253429 100675729 + MGP_NODShiLtJ_P0026610 protein_coding protein_coding MGP_NODShiLtJ_T0026611.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100253456 100675330 + MGP_NODShiLtJ_P0026611 protein_coding protein_coding MGP_NODShiLtJ_T0026612.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100517707 100594490 + protein_coding processed_transcript MGP_NODShiLtJ_T0026613.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100519241 100675722 + MGP_NODShiLtJ_P0026613 protein_coding protein_coding MGP_NODShiLtJ_T0026614.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100519373 100676576 + MGP_NODShiLtJ_P0026614 protein_coding protein_coding MGP_NODShiLtJ_T0026615.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100519602 100676403 + MGP_NODShiLtJ_P0026615 protein_coding protein_coding MGP_NODShiLtJ_T0026616.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100519640 100611910 + protein_coding processed_transcript MGP_NODShiLtJ_T0026617.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100519664 100622941 + protein_coding processed_transcript MGP_NODShiLtJ_T0026618.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100592259 100625371 + MGP_NODShiLtJ_P0026618 protein_coding protein_coding MGP_NODShiLtJ_T0026619.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100592270 100676576 + MGP_NODShiLtJ_P0026619 protein_coding protein_coding MGP_NODShiLtJ_T0026620.1 MGP_NODShiLtJ_G0017504.1 mouse_genomes_project 10 100592350 100675602 + MGP_NODShiLtJ_P0026620 protein_coding protein_coding MGP_NODShiLtJ_T0025262.1 MGP_NODShiLtJ_G0017164.1 mouse_genomes_project 10 68954407 69028193 - MGP_NODShiLtJ_P0025262 Stox1 protein_coding protein_coding MGP_NODShiLtJ_T0025263.1 MGP_NODShiLtJ_G0017164.1 mouse_genomes_project 10 68954407 69027866 - MGP_NODShiLtJ_P0025263 Stox1 protein_coding protein_coding MGP_NODShiLtJ_T0025264.1 MGP_NODShiLtJ_G0017164.1 mouse_genomes_project 10 68963478 69027866 - MGP_NODShiLtJ_P0025264 Stox1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024761.1 MGP_NODShiLtJ_G0017014.1 mouse_genomes_project 10 41483669 41497647 - MGP_NODShiLtJ_P0024761 Wisp3 protein_coding protein_coding MGP_NODShiLtJ_T0025776.1 MGP_NODShiLtJ_G0017280.1 mouse_genomes_project 10 86469985 86484222 - MGP_NODShiLtJ_P0025776 Pwp2 protein_coding protein_coding MGP_NODShiLtJ_T0025938.1 MGP_NODShiLtJ_G0017337.1 mouse_genomes_project 10 88532652 88541208 + MGP_NODShiLtJ_P0025938 Cnn2 protein_coding protein_coding MGP_NODShiLtJ_T0025939.1 MGP_NODShiLtJ_G0017337.1 mouse_genomes_project 10 88532691 88539830 + MGP_NODShiLtJ_P0025939 Cnn2 protein_coding protein_coding MGP_NODShiLtJ_T0098608.1 MGP_NODShiLtJ_G0037002.1 mouse_genomes_project 10 24777330 24777437 + Gm23410 snRNA snRNA MGP_NODShiLtJ_T0009556.1 MGP_NODShiLtJ_G0007689.1 mouse_genomes_project 10 144884154 144884217 - Mir6916 miRNA miRNA MGP_NODShiLtJ_T0026238.1 MGP_NODShiLtJ_G0017412.1 mouse_genomes_project 10 90011268 90018578 + MGP_NODShiLtJ_P0026238 Tbxa2r protein_coding protein_coding MGP_NODShiLtJ_T0025325.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74149382 74254861 + protein_coding retained_intron MGP_NODShiLtJ_T0025326.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74149662 74218094 + protein_coding retained_intron MGP_NODShiLtJ_T0025327.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74183509 74323472 + MGP_NODShiLtJ_P0025327 protein_coding protein_coding MGP_NODShiLtJ_T0025328.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74183509 74323464 + MGP_NODShiLtJ_P0025328 protein_coding protein_coding MGP_NODShiLtJ_T0025329.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74183509 74290920 + MGP_NODShiLtJ_P0025329 protein_coding protein_coding MGP_NODShiLtJ_T0025330.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74248474 74280694 + protein_coding retained_intron MGP_NODShiLtJ_T0025331.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74248475 74323464 + MGP_NODShiLtJ_P0025331 protein_coding protein_coding MGP_NODShiLtJ_T0025332.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74248478 74254863 + protein_coding retained_intron MGP_NODShiLtJ_T0025333.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74282264 74282881 + protein_coding retained_intron MGP_NODShiLtJ_T0025334.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74304581 74319806 + MGP_NODShiLtJ_P0025334 protein_coding protein_coding MGP_NODShiLtJ_T0025335.1 MGP_NODShiLtJ_G0017181.1 mouse_genomes_project 10 74305355 74311851 + protein_coding retained_intron MGP_NODShiLtJ_T0006105.1 MGP_NODShiLtJ_G0005093.1 mouse_genomes_project 10 145401418 145408650 + 9030616G12Rik lincRNA lincRNA MGP_NODShiLtJ_T0027192.1 MGP_NODShiLtJ_G0017693.1 mouse_genomes_project 10 143959633 143968253 + MGP_NODShiLtJ_P0027192 Tac2 protein_coding protein_coding MGP_NODShiLtJ_T0027193.1 MGP_NODShiLtJ_G0017693.1 mouse_genomes_project 10 143960550 143968253 + MGP_NODShiLtJ_P0027193 Tac2 protein_coding protein_coding MGP_NODShiLtJ_T0024683.1 MGP_NODShiLtJ_G0016978.1 mouse_genomes_project 10 29927538 30058532 - MGP_NODShiLtJ_P0024683 Rspo3 protein_coding protein_coding MGP_NODShiLtJ_T0016974.1 MGP_NODShiLtJ_G0014999.1 mouse_genomes_project 10 1392259 1407325 + Gm16153 processed_transcript processed_transcript MGP_NODShiLtJ_T0011169.1 MGP_NODShiLtJ_G0009302.1 mouse_genomes_project 10 101908638 101908901 - Gm27588 misc_RNA misc_RNA MGP_NODShiLtJ_T0097881.1 MGP_NODShiLtJ_G0036293.1 mouse_genomes_project 10 47545747 47545858 + Gm27977 rRNA rRNA MGP_NODShiLtJ_T0012324.1 MGP_NODShiLtJ_G0010432.1 mouse_genomes_project 10 118745102 118745495 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026276.1 MGP_NODShiLtJ_G0017420.1 mouse_genomes_project 10 90085326 90121483 - MGP_NODShiLtJ_P0026276 Nfic protein_coding protein_coding MGP_NODShiLtJ_T0026277.1 MGP_NODShiLtJ_G0017420.1 mouse_genomes_project 10 90088275 90121469 - MGP_NODShiLtJ_P0026277 Nfic protein_coding protein_coding MGP_NODShiLtJ_T0026278.1 MGP_NODShiLtJ_G0017420.1 mouse_genomes_project 10 90088275 90121410 - MGP_NODShiLtJ_P0026278 Nfic protein_coding protein_coding MGP_NODShiLtJ_T0026279.1 MGP_NODShiLtJ_G0017420.1 mouse_genomes_project 10 90088333 90089692 - Nfic protein_coding processed_transcript MGP_NODShiLtJ_T0026280.1 MGP_NODShiLtJ_G0017420.1 mouse_genomes_project 10 90089906 90098102 - MGP_NODShiLtJ_P0026280 Nfic protein_coding protein_coding MGP_NODShiLtJ_T0026281.1 MGP_NODShiLtJ_G0017420.1 mouse_genomes_project 10 90090090 90136271 - MGP_NODShiLtJ_P0026281 Nfic protein_coding protein_coding MGP_NODShiLtJ_T0025816.1 MGP_NODShiLtJ_G0017302.1 mouse_genomes_project 10 87552815 87903973 + MGP_NODShiLtJ_P0025816 protein_coding protein_coding MGP_NODShiLtJ_T0024900.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45564804 45670681 + MGP_NODShiLtJ_P0024900 Scml4 protein_coding protein_coding MGP_NODShiLtJ_T0024901.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45564981 45636984 + MGP_NODShiLtJ_P0024901 Scml4 protein_coding protein_coding MGP_NODShiLtJ_T0024902.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45565105 45642111 + MGP_NODShiLtJ_P0024902 Scml4 protein_coding protein_coding MGP_NODShiLtJ_T0024903.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45565231 45670679 + MGP_NODShiLtJ_P0024903 Scml4 protein_coding protein_coding MGP_NODShiLtJ_T0024904.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45569952 45636849 + MGP_NODShiLtJ_P0024904 Scml4 protein_coding protein_coding MGP_NODShiLtJ_T0024905.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45607700 45642889 + MGP_NODShiLtJ_P0024905 Scml4 protein_coding protein_coding MGP_NODShiLtJ_T0024906.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45642087 45668671 + Scml4 protein_coding retained_intron MGP_NODShiLtJ_T0024907.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45642665 45655947 + Scml4 protein_coding retained_intron MGP_NODShiLtJ_T0024908.1 MGP_NODShiLtJ_G0017053.1 mouse_genomes_project 10 45647630 45668622 + Scml4 protein_coding processed_transcript MGP_NODShiLtJ_T0099873.1 MGP_NODShiLtJ_G0038267.1 mouse_genomes_project 10 103863427 103863595 - Gm25962 snoRNA snoRNA MGP_NODShiLtJ_T0026333.1 MGP_NODShiLtJ_G0017429.1 mouse_genomes_project 10 90325600 90343384 + BC025920 protein_coding processed_transcript MGP_NODShiLtJ_T0026334.1 MGP_NODShiLtJ_G0017429.1 mouse_genomes_project 10 90325633 90329138 + MGP_NODShiLtJ_P0026334 BC025920 protein_coding protein_coding MGP_NODShiLtJ_T0026335.1 MGP_NODShiLtJ_G0017429.1 mouse_genomes_project 10 90326213 90328847 + MGP_NODShiLtJ_P0026335 BC025920 protein_coding protein_coding MGP_NODShiLtJ_T0026336.1 MGP_NODShiLtJ_G0017429.1 mouse_genomes_project 10 90326213 90328847 + MGP_NODShiLtJ_P0026336 BC025920 protein_coding protein_coding MGP_NODShiLtJ_T0026337.1 MGP_NODShiLtJ_G0017429.1 mouse_genomes_project 10 90326355 90329111 + MGP_NODShiLtJ_P0026337 BC025920 protein_coding protein_coding MGP_NODShiLtJ_T0025039.1 MGP_NODShiLtJ_G0017104.1 mouse_genomes_project 10 64094497 64095990 - MGP_NODShiLtJ_P0025039 Gm4981 protein_coding protein_coding MGP_NODShiLtJ_T0026163.1 MGP_NODShiLtJ_G0017393.1 mouse_genomes_project 10 89680697 89689592 - MGP_NODShiLtJ_P0026163 Slc39a3 protein_coding protein_coding MGP_NODShiLtJ_T0026164.1 MGP_NODShiLtJ_G0017393.1 mouse_genomes_project 10 89680699 89689474 - MGP_NODShiLtJ_P0026164 Slc39a3 protein_coding protein_coding MGP_NODShiLtJ_T0026165.1 MGP_NODShiLtJ_G0017393.1 mouse_genomes_project 10 89680700 89686062 - MGP_NODShiLtJ_P0026165 Slc39a3 protein_coding protein_coding MGP_NODShiLtJ_T0026166.1 MGP_NODShiLtJ_G0017393.1 mouse_genomes_project 10 89686006 89689448 - Slc39a3 protein_coding processed_transcript MGP_NODShiLtJ_T0026167.1 MGP_NODShiLtJ_G0017393.1 mouse_genomes_project 10 89686032 89689416 - Slc39a3 protein_coding processed_transcript MGP_NODShiLtJ_T0009514.1 MGP_NODShiLtJ_G0007647.1 mouse_genomes_project 10 89236727 89236797 + Mir6912 miRNA miRNA MGP_NODShiLtJ_T0027017.1 MGP_NODShiLtJ_G0017638.1 mouse_genomes_project 10 135984865 135998739 + MGP_NODShiLtJ_P0027017 4921513I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0026728.1 MGP_NODShiLtJ_G0017530.1 mouse_genomes_project 10 105222847 105391971 - MGP_NODShiLtJ_P0026728 Cradd protein_coding protein_coding MGP_NODShiLtJ_T0009487.1 MGP_NODShiLtJ_G0007620.1 mouse_genomes_project 10 44260853 44260908 + Mir3473b miRNA miRNA MGP_NODShiLtJ_T0098660.1 MGP_NODShiLtJ_G0037054.1 mouse_genomes_project 10 144629814 144629920 - Gm23241 snRNA snRNA MGP_NODShiLtJ_T0027103.1 MGP_NODShiLtJ_G0017669.1 mouse_genomes_project 10 143334665 143341875 + MGP_NODShiLtJ_P0027103 B4galnt1 protein_coding protein_coding MGP_NODShiLtJ_T0026974.1 MGP_NODShiLtJ_G0017628.1 mouse_genomes_project 10 133140819 133145894 + MGP_NODShiLtJ_P0026974 Il22 protein_coding protein_coding MGP_NODShiLtJ_T0026975.1 MGP_NODShiLtJ_G0017628.1 mouse_genomes_project 10 133142688 133145890 + Il22 protein_coding retained_intron MGP_NODShiLtJ_T0026050.1 MGP_NODShiLtJ_G0017358.1 mouse_genomes_project 10 88906281 88913650 + MGP_NODShiLtJ_P0026050 Reep6 protein_coding protein_coding MGP_NODShiLtJ_T0026051.1 MGP_NODShiLtJ_G0017358.1 mouse_genomes_project 10 88906281 88913650 + MGP_NODShiLtJ_P0026051 Reep6 protein_coding protein_coding MGP_NODShiLtJ_T0026052.1 MGP_NODShiLtJ_G0017358.1 mouse_genomes_project 10 88907353 88913649 + MGP_NODShiLtJ_P0026052 Reep6 protein_coding protein_coding MGP_NODShiLtJ_T0026053.1 MGP_NODShiLtJ_G0017358.1 mouse_genomes_project 10 88907406 88911641 + Reep6 protein_coding retained_intron MGP_NODShiLtJ_T0026054.1 MGP_NODShiLtJ_G0017358.1 mouse_genomes_project 10 88907410 88912791 + MGP_NODShiLtJ_P0026054 Reep6 protein_coding protein_coding MGP_NODShiLtJ_T0024689.1 MGP_NODShiLtJ_G0016982.1 mouse_genomes_project 10 31332656 31499852 - MGP_NODShiLtJ_P0024689 Ncoa7 protein_coding protein_coding MGP_NODShiLtJ_T0024690.1 MGP_NODShiLtJ_G0016982.1 mouse_genomes_project 10 31336400 31464714 - MGP_NODShiLtJ_P0024690 Ncoa7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026860.1 MGP_NODShiLtJ_G0017584.1 mouse_genomes_project 10 125063006 125087734 + MGP_NODShiLtJ_P0026860 Nap1l1 protein_coding protein_coding MGP_NODShiLtJ_T0026861.1 MGP_NODShiLtJ_G0017584.1 mouse_genomes_project 10 125070423 125088990 + MGP_NODShiLtJ_P0026861 Nap1l1 protein_coding protein_coding MGP_NODShiLtJ_T0099894.1 MGP_NODShiLtJ_G0038288.1 mouse_genomes_project 10 146245929 146246053 + Gm24717 snoRNA snoRNA MGP_NODShiLtJ_T0011164.1 MGP_NODShiLtJ_G0009297.1 mouse_genomes_project 10 83460211 83460534 + Gm25545 misc_RNA misc_RNA MGP_NODShiLtJ_T0024934.1 MGP_NODShiLtJ_G0017064.1 mouse_genomes_project 10 47123012 47224865 + MGP_NODShiLtJ_P0024934 Atg5 protein_coding protein_coding MGP_NODShiLtJ_T0097878.1 MGP_NODShiLtJ_G0036290.1 mouse_genomes_project 10 31362766 31362860 - Gm24189 rRNA rRNA MGP_NODShiLtJ_T0025790.1 MGP_NODShiLtJ_G0017284.1 mouse_genomes_project 10 86748420 86750374 + MGP_NODShiLtJ_P0025790 Cstb protein_coding protein_coding MGP_NODShiLtJ_T0024642.1 MGP_NODShiLtJ_G0016967.1 mouse_genomes_project 10 26249361 26355829 - MGP_NODShiLtJ_P0024642 L3mbtl3 protein_coding protein_coding MGP_NODShiLtJ_T0024643.1 MGP_NODShiLtJ_G0016967.1 mouse_genomes_project 10 26249364 26355829 - MGP_NODShiLtJ_P0024643 L3mbtl3 protein_coding protein_coding MGP_NODShiLtJ_T0024644.1 MGP_NODShiLtJ_G0016967.1 mouse_genomes_project 10 26250345 26358055 - MGP_NODShiLtJ_P0024644 L3mbtl3 protein_coding protein_coding MGP_NODShiLtJ_T0025375.1 MGP_NODShiLtJ_G0017193.1 mouse_genomes_project 10 76609271 76625569 - MGP_NODShiLtJ_P0025375 Cdk1 protein_coding protein_coding MGP_NODShiLtJ_T0025376.1 MGP_NODShiLtJ_G0017193.1 mouse_genomes_project 10 76610960 76625534 - MGP_NODShiLtJ_P0025376 Cdk1 protein_coding protein_coding MGP_NODShiLtJ_T0025377.1 MGP_NODShiLtJ_G0017193.1 mouse_genomes_project 10 76613229 76615360 - Cdk1 protein_coding retained_intron MGP_NODShiLtJ_T0025378.1 MGP_NODShiLtJ_G0017193.1 mouse_genomes_project 10 76613360 76618141 - Cdk1 protein_coding retained_intron MGP_NODShiLtJ_T0025379.1 MGP_NODShiLtJ_G0017193.1 mouse_genomes_project 10 76613396 76623463 - MGP_NODShiLtJ_P0025379 Cdk1 protein_coding protein_coding MGP_NODShiLtJ_T0025380.1 MGP_NODShiLtJ_G0017193.1 mouse_genomes_project 10 76613434 76618065 - Cdk1 protein_coding retained_intron MGP_NODShiLtJ_T0025381.1 MGP_NODShiLtJ_G0017193.1 mouse_genomes_project 10 76617635 76625541 - Cdk1 protein_coding retained_intron MGP_NODShiLtJ_T0101036.1 MGP_NODShiLtJ_G0039411.1 mouse_genomes_project 10 132421594 132423124 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101037.1 MGP_NODShiLtJ_G0039411.1 mouse_genomes_project 10 132421967 132422530 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0026551.1 MGP_NODShiLtJ_G0017492.1 mouse_genomes_project 10 97955275 98048747 - MGP_NODShiLtJ_P0026551 Mybpc1 protein_coding protein_coding MGP_NODShiLtJ_T0026552.1 MGP_NODShiLtJ_G0017492.1 mouse_genomes_project 10 97955278 97960102 - Mybpc1 protein_coding retained_intron MGP_NODShiLtJ_T0026553.1 MGP_NODShiLtJ_G0017492.1 mouse_genomes_project 10 97955335 98048620 - MGP_NODShiLtJ_P0026553 Mybpc1 protein_coding protein_coding MGP_NODShiLtJ_T0026554.1 MGP_NODShiLtJ_G0017492.1 mouse_genomes_project 10 97956383 97974352 - MGP_NODShiLtJ_P0026554 Mybpc1 protein_coding protein_coding MGP_NODShiLtJ_T0026555.1 MGP_NODShiLtJ_G0017492.1 mouse_genomes_project 10 97963105 97974404 - Mybpc1 protein_coding retained_intron MGP_NODShiLtJ_T0026556.1 MGP_NODShiLtJ_G0017492.1 mouse_genomes_project 10 97963196 97992282 - MGP_NODShiLtJ_P0026556 Mybpc1 protein_coding protein_coding MGP_NODShiLtJ_T0025058.1 MGP_NODShiLtJ_G0017110.1 mouse_genomes_project 10 64611420 64611809 + MGP_NODShiLtJ_P0025058 BB019430 protein_coding protein_coding MGP_NODShiLtJ_T0026377.1 MGP_NODShiLtJ_G0017441.1 mouse_genomes_project 10 91559084 91603495 - MGP_NODShiLtJ_P0026377 Glt8d2 protein_coding protein_coding MGP_NODShiLtJ_T0026378.1 MGP_NODShiLtJ_G0017441.1 mouse_genomes_project 10 91559957 91562119 - Glt8d2 protein_coding retained_intron MGP_NODShiLtJ_T0026379.1 MGP_NODShiLtJ_G0017441.1 mouse_genomes_project 10 91560210 91570325 - MGP_NODShiLtJ_P0026379 Glt8d2 protein_coding protein_coding MGP_NODShiLtJ_T0026380.1 MGP_NODShiLtJ_G0017441.1 mouse_genomes_project 10 91561447 91603462 - MGP_NODShiLtJ_P0026380 Glt8d2 protein_coding protein_coding MGP_NODShiLtJ_T0026381.1 MGP_NODShiLtJ_G0017441.1 mouse_genomes_project 10 91565081 91603462 - MGP_NODShiLtJ_P0026381 Glt8d2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026382.1 MGP_NODShiLtJ_G0017441.1 mouse_genomes_project 10 91575412 91581241 - MGP_NODShiLtJ_P0026382 Glt8d2 protein_coding protein_coding MGP_NODShiLtJ_T0026383.1 MGP_NODShiLtJ_G0017441.1 mouse_genomes_project 10 91580027 91603474 - Glt8d2 protein_coding retained_intron MGP_NODShiLtJ_T0026858.1 MGP_NODShiLtJ_G0017582.1 mouse_genomes_project 10 124751244 124882488 + MGP_NODShiLtJ_P0026858 Osbpl8 protein_coding protein_coding MGP_NODShiLtJ_T0025777.1 MGP_NODShiLtJ_G0017281.1 mouse_genomes_project 10 86486918 86546016 - MGP_NODShiLtJ_P0025777 Trappc10 protein_coding protein_coding MGP_NODShiLtJ_T0006085.1 MGP_NODShiLtJ_G0005078.1 mouse_genomes_project 10 109986004 110118564 + B530045E10Rik lincRNA lincRNA MGP_NODShiLtJ_T0006086.1 MGP_NODShiLtJ_G0005078.1 mouse_genomes_project 10 110116039 110118564 + B530045E10Rik lincRNA lincRNA MGP_NODShiLtJ_T0006036.1 MGP_NODShiLtJ_G0005050.1 mouse_genomes_project 10 69749702 69764182 + Gm16145 lincRNA lincRNA MGP_NODShiLtJ_T0026746.1 MGP_NODShiLtJ_G0017540.1 mouse_genomes_project 10 107916798 107926995 + MGP_NODShiLtJ_P0026746 Lum protein_coding protein_coding MGP_NODShiLtJ_T0009488.1 MGP_NODShiLtJ_G0007621.1 mouse_genomes_project 10 47220249 47220342 + Mir1929 miRNA miRNA MGP_NODShiLtJ_T0099877.1 MGP_NODShiLtJ_G0038271.1 mouse_genomes_project 10 114853957 114854090 + Gm25376 snoRNA snoRNA MGP_NODShiLtJ_T0099836.1 MGP_NODShiLtJ_G0038230.1 mouse_genomes_project 10 9847154 9847280 + Gm25011 snoRNA snoRNA MGP_NODShiLtJ_T0025234.1 MGP_NODShiLtJ_G0017156.1 mouse_genomes_project 10 68657167 68699131 - MGP_NODShiLtJ_P0025234 Hkdc1 protein_coding protein_coding MGP_NODShiLtJ_T0025235.1 MGP_NODShiLtJ_G0017156.1 mouse_genomes_project 10 68670955 68676158 - Hkdc1 protein_coding retained_intron MGP_NODShiLtJ_T0025236.1 MGP_NODShiLtJ_G0017156.1 mouse_genomes_project 10 68686466 68688482 - Hkdc1 protein_coding retained_intron MGP_NODShiLtJ_T0025237.1 MGP_NODShiLtJ_G0017156.1 mouse_genomes_project 10 68693022 68699048 - Hkdc1 protein_coding retained_intron MGP_NODShiLtJ_T0026362.1 MGP_NODShiLtJ_G0017436.1 mouse_genomes_project 10 90851620 90879855 + MGP_NODShiLtJ_P0026362 AU041133 protein_coding protein_coding MGP_NODShiLtJ_T0026363.1 MGP_NODShiLtJ_G0017436.1 mouse_genomes_project 10 90861857 90878801 + MGP_NODShiLtJ_P0026363 AU041133 protein_coding protein_coding MGP_NODShiLtJ_T0025345.1 MGP_NODShiLtJ_G0017184.1 mouse_genomes_project 10 74630222 74634655 - MGP_NODShiLtJ_P0025345 Ado protein_coding protein_coding MGP_NODShiLtJ_T0025169.1 MGP_NODShiLtJ_G0017136.1 mouse_genomes_project 10 67348884 67438152 - MGP_NODShiLtJ_P0025169 Adamts14 protein_coding protein_coding MGP_NODShiLtJ_T0025170.1 MGP_NODShiLtJ_G0017136.1 mouse_genomes_project 10 67350240 67437956 - MGP_NODShiLtJ_P0025170 Adamts14 protein_coding protein_coding MGP_NODShiLtJ_T0026485.1 MGP_NODShiLtJ_G0017474.1 mouse_genomes_project 10 95970810 95973900 + MGP_NODShiLtJ_P0026485 protein_coding protein_coding MGP_NODShiLtJ_T0026799.1 MGP_NODShiLtJ_G0017561.1 mouse_genomes_project 10 113909486 113927400 - MGP_NODShiLtJ_P0026799 Nts protein_coding protein_coding MGP_NODShiLtJ_T0025778.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86574657 86662280 - MGP_NODShiLtJ_P0025778 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025779.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86577042 86661703 - MGP_NODShiLtJ_P0025779 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025780.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86577042 86603627 - MGP_NODShiLtJ_P0025780 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025781.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86577042 86661891 - MGP_NODShiLtJ_P0025781 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025782.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86577042 86661538 - MGP_NODShiLtJ_P0025782 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025783.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86579090 86600823 - MGP_NODShiLtJ_P0025783 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025784.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86579093 86583916 - Agpat3 protein_coding retained_intron MGP_NODShiLtJ_T0025785.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86589746 86627482 - MGP_NODShiLtJ_P0025785 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025786.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86589792 86612979 - MGP_NODShiLtJ_P0025786 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025787.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86593334 86662327 - MGP_NODShiLtJ_P0025787 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0025788.1 MGP_NODShiLtJ_G0017282.1 mouse_genomes_project 10 86593345 86662050 - MGP_NODShiLtJ_P0025788 Agpat3 protein_coding protein_coding MGP_NODShiLtJ_T0027323.1 MGP_NODShiLtJ_G0017740.1 mouse_genomes_project 10 145103344 145122157 + MGP_NODShiLtJ_P0027323 Pmel protein_coding unknown_likely_coding MGP_NODShiLtJ_T0099837.1 MGP_NODShiLtJ_G0038231.1 mouse_genomes_project 10 10298785 10298995 + Gm25139 snoRNA snoRNA MGP_NODShiLtJ_T0098606.1 MGP_NODShiLtJ_G0037000.1 mouse_genomes_project 10 16132227 16132324 + Gm25382 snRNA snRNA MGP_NODShiLtJ_T0024717.1 MGP_NODShiLtJ_G0016997.1 mouse_genomes_project 10 35395722 35474113 + MGP_NODShiLtJ_P0024717 Trappc3l protein_coding protein_coding MGP_NODShiLtJ_T0026019.1 MGP_NODShiLtJ_G0017351.1 mouse_genomes_project 10 88819023 88826696 + MGP_NODShiLtJ_P0026019 Ndufs7 protein_coding protein_coding MGP_NODShiLtJ_T0026020.1 MGP_NODShiLtJ_G0017351.1 mouse_genomes_project 10 88819351 88823316 + Ndufs7 protein_coding retained_intron MGP_NODShiLtJ_T0026021.1 MGP_NODShiLtJ_G0017351.1 mouse_genomes_project 10 88819354 88826695 + MGP_NODShiLtJ_P0026021 Ndufs7 protein_coding protein_coding MGP_NODShiLtJ_T0026022.1 MGP_NODShiLtJ_G0017351.1 mouse_genomes_project 10 88819362 88823844 + Ndufs7 protein_coding retained_intron MGP_NODShiLtJ_T0026023.1 MGP_NODShiLtJ_G0017351.1 mouse_genomes_project 10 88819387 88826697 + Ndufs7 protein_coding processed_transcript MGP_NODShiLtJ_T0026024.1 MGP_NODShiLtJ_G0017351.1 mouse_genomes_project 10 88823217 88825043 + Ndufs7 protein_coding retained_intron MGP_NODShiLtJ_T0027409.1 MGP_NODShiLtJ_G0017798.1 mouse_genomes_project 10 146603690 146604647 - MGP_NODShiLtJ_P0027409 Olfr818 protein_coding protein_coding MGP_NODShiLtJ_T0027410.1 MGP_NODShiLtJ_G0017798.1 mouse_genomes_project 10 146603932 146605928 - MGP_NODShiLtJ_P0027410 Olfr818 protein_coding protein_coding MGP_NODShiLtJ_T0025817.1 MGP_NODShiLtJ_G0017303.1 mouse_genomes_project 10 87552819 87611363 + MGP_NODShiLtJ_P0025817 protein_coding protein_coding MGP_NODShiLtJ_T0003035.1 MGP_NODShiLtJ_G0002828.1 mouse_genomes_project 10 124361694 124472934 - 1700020G17Rik antisense antisense MGP_NODShiLtJ_T0003036.1 MGP_NODShiLtJ_G0002828.1 mouse_genomes_project 10 124378447 124472964 - 1700020G17Rik antisense antisense MGP_NODShiLtJ_T0003037.1 MGP_NODShiLtJ_G0002828.1 mouse_genomes_project 10 124390074 124472996 - 1700020G17Rik antisense antisense MGP_NODShiLtJ_T0003038.1 MGP_NODShiLtJ_G0002828.1 mouse_genomes_project 10 124414101 124472983 - 1700020G17Rik antisense antisense MGP_NODShiLtJ_T0009513.1 MGP_NODShiLtJ_G0007646.1 mouse_genomes_project 10 88978781 88978864 + Gm22721 miRNA miRNA MGP_NODShiLtJ_T0027274.1 MGP_NODShiLtJ_G0017724.1 mouse_genomes_project 10 144759291 144764582 - MGP_NODShiLtJ_P0027274 Slc39a5 protein_coding protein_coding MGP_NODShiLtJ_T0027275.1 MGP_NODShiLtJ_G0017724.1 mouse_genomes_project 10 144759291 144763824 - MGP_NODShiLtJ_P0027275 Slc39a5 protein_coding protein_coding MGP_NODShiLtJ_T0024544.1 MGP_NODShiLtJ_G0016926.1 mouse_genomes_project 10 20685504 20691707 + MGP_NODShiLtJ_P0024544 Gm9923 protein_coding protein_coding MGP_NODShiLtJ_T0027401.1 MGP_NODShiLtJ_G0017791.1 mouse_genomes_project 10 146350140 146351074 + MGP_NODShiLtJ_P0027401 protein_coding protein_coding MGP_NODShiLtJ_T0025929.1 MGP_NODShiLtJ_G0017334.1 mouse_genomes_project 10 88504245 88513340 + MGP_NODShiLtJ_P0025929 Wdr18 protein_coding protein_coding MGP_NODShiLtJ_T0026036.1 MGP_NODShiLtJ_G0017354.1 mouse_genomes_project 10 88867018 88868654 + MGP_NODShiLtJ_P0026036 Rps15 protein_coding protein_coding MGP_NODShiLtJ_T0024932.1 MGP_NODShiLtJ_G0017063.1 mouse_genomes_project 10 46743487 46801583 - MGP_NODShiLtJ_P0024932 Aim1 protein_coding protein_coding MGP_NODShiLtJ_T0024933.1 MGP_NODShiLtJ_G0017063.1 mouse_genomes_project 10 46743816 46972063 - MGP_NODShiLtJ_P0024933 Aim1 protein_coding protein_coding MGP_NODShiLtJ_T0009493.1 MGP_NODShiLtJ_G0007626.1 mouse_genomes_project 10 64888058 64888262 + Gm27672 miRNA miRNA MGP_NODShiLtJ_T0024816.1 MGP_NODShiLtJ_G0017036.1 mouse_genomes_project 10 44023491 44038915 + MGP_NODShiLtJ_P0024816 Zbtb24 protein_coding protein_coding MGP_NODShiLtJ_T0027367.1 MGP_NODShiLtJ_G0017766.1 mouse_genomes_project 10 145732875 145733836 - MGP_NODShiLtJ_P0027367 Olfr777 protein_coding protein_coding MGP_NODShiLtJ_T0027368.1 MGP_NODShiLtJ_G0017766.1 mouse_genomes_project 10 145732875 145733811 - MGP_NODShiLtJ_P0027368 Olfr777 protein_coding protein_coding MGP_NODShiLtJ_T0026752.1 MGP_NODShiLtJ_G0017545.1 mouse_genomes_project 10 108135135 108137017 - MGP_NODShiLtJ_P0026752 C030005K15Rik protein_coding protein_coding MGP_NODShiLtJ_T0026008.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88795494 88813792 + MGP_NODShiLtJ_P0026008 Mum1 protein_coding protein_coding MGP_NODShiLtJ_T0026009.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88796386 88813789 + Mum1 protein_coding retained_intron MGP_NODShiLtJ_T0026010.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88796403 88802453 + MGP_NODShiLtJ_P0026010 Mum1 protein_coding protein_coding MGP_NODShiLtJ_T0026011.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88796411 88813787 + Mum1 protein_coding retained_intron MGP_NODShiLtJ_T0026012.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88796482 88798903 + Mum1 protein_coding retained_intron MGP_NODShiLtJ_T0026013.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88803966 88813792 + Mum1 protein_coding retained_intron MGP_NODShiLtJ_T0026014.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88803967 88806887 + Mum1 protein_coding retained_intron MGP_NODShiLtJ_T0026015.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88804032 88813790 + Mum1 protein_coding retained_intron MGP_NODShiLtJ_T0026016.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88805883 88810165 + Mum1 protein_coding retained_intron MGP_NODShiLtJ_T0026017.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88811310 88813789 + Mum1 protein_coding retained_intron MGP_NODShiLtJ_T0026018.1 MGP_NODShiLtJ_G0017350.1 mouse_genomes_project 10 88812500 88813789 + Mum1 protein_coding processed_transcript MGP_NODShiLtJ_T0101031.1 MGP_NODShiLtJ_G0039408.1 mouse_genomes_project 10 29303245 29341941 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101032.1 MGP_NODShiLtJ_G0039408.1 mouse_genomes_project 10 29341502 29342851 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0099860.1 MGP_NODShiLtJ_G0038254.1 mouse_genomes_project 10 65138838 65138965 + Gm23223 snoRNA snoRNA MGP_NODShiLtJ_T0012327.1 MGP_NODShiLtJ_G0010435.1 mouse_genomes_project 10 133895688 133896608 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0024811.1 MGP_NODShiLtJ_G0017033.1 mouse_genomes_project 10 43600121 43602418 - MGP_NODShiLtJ_P0024811 Gpr6 protein_coding protein_coding MGP_NODShiLtJ_T0025142.1 MGP_NODShiLtJ_G0017131.1 mouse_genomes_project 10 66804435 66848418 - MGP_NODShiLtJ_P0025142 Slc29a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025143.1 MGP_NODShiLtJ_G0017131.1 mouse_genomes_project 10 66805042 66849404 - MGP_NODShiLtJ_P0025143 Slc29a3 protein_coding protein_coding MGP_NODShiLtJ_T0025144.1 MGP_NODShiLtJ_G0017131.1 mouse_genomes_project 10 66805236 66813539 - Slc29a3 protein_coding retained_intron MGP_NODShiLtJ_T0025145.1 MGP_NODShiLtJ_G0017131.1 mouse_genomes_project 10 66810083 66848429 - Slc29a3 protein_coding processed_transcript MGP_NODShiLtJ_T0026227.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89975515 90002509 + MGP_NODShiLtJ_P0026227 Pip5k1c protein_coding protein_coding MGP_NODShiLtJ_T0026228.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89975532 90000791 + MGP_NODShiLtJ_P0026228 Pip5k1c protein_coding protein_coding MGP_NODShiLtJ_T0026229.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89975540 89991667 + MGP_NODShiLtJ_P0026229 Pip5k1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026230.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89975556 90002509 + MGP_NODShiLtJ_P0026230 Pip5k1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026231.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89975557 90002510 + MGP_NODShiLtJ_P0026231 Pip5k1c protein_coding protein_coding MGP_NODShiLtJ_T0026232.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89993224 89995977 + MGP_NODShiLtJ_P0026232 Pip5k1c protein_coding protein_coding MGP_NODShiLtJ_T0026233.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89995899 90000682 + MGP_NODShiLtJ_P0026233 Pip5k1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026234.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89996034 90000557 + MGP_NODShiLtJ_P0026234 Pip5k1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026235.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89996524 89998319 + Pip5k1c protein_coding retained_intron MGP_NODShiLtJ_T0026236.1 MGP_NODShiLtJ_G0017410.1 mouse_genomes_project 10 89999378 90000550 + Pip5k1c protein_coding retained_intron MGP_NODShiLtJ_T0024720.1 MGP_NODShiLtJ_G0017000.1 mouse_genomes_project 10 35490620 35492524 - MGP_NODShiLtJ_P0024720 Fam26f protein_coding protein_coding MGP_NODShiLtJ_T0026091.1 MGP_NODShiLtJ_G0017365.1 mouse_genomes_project 10 89107759 89134827 + MGP_NODShiLtJ_P0026091 Onecut3 protein_coding protein_coding MGP_NODShiLtJ_T0006058.1 MGP_NODShiLtJ_G0005065.1 mouse_genomes_project 10 93616355 93623454 - Platr7 lincRNA lincRNA MGP_NODShiLtJ_T0097739.1 MGP_NODShiLtJ_G0036151.1 mouse_genomes_project 10 80760113 80760585 + pseudogene pseudogene MGP_NODShiLtJ_T0025815.1 MGP_NODShiLtJ_G0017301.1 mouse_genomes_project 10 87452744 87486718 - MGP_NODShiLtJ_P0025815 2610008E11Rik protein_coding protein_coding MGP_NODShiLtJ_T0026199.1 MGP_NODShiLtJ_G0017401.1 mouse_genomes_project 10 89859208 89860468 - MGP_NODShiLtJ_P0026199 4930442H23Rik protein_coding protein_coding MGP_NODShiLtJ_T0017008.1 MGP_NODShiLtJ_G0015010.1 mouse_genomes_project 10 118024797 118032681 + Gm15663 processed_transcript antisense MGP_NODShiLtJ_T0017009.1 MGP_NODShiLtJ_G0015010.1 mouse_genomes_project 10 118025449 118034445 + Gm15663 processed_transcript lincRNA MGP_NODShiLtJ_T0024353.1 MGP_NODShiLtJ_G0016877.1 mouse_genomes_project 10 8428457 8863737 - MGP_NODShiLtJ_P0024353 Grm1 protein_coding protein_coding MGP_NODShiLtJ_T0024354.1 MGP_NODShiLtJ_G0016877.1 mouse_genomes_project 10 8430986 8863686 - MGP_NODShiLtJ_P0024354 Grm1 protein_coding protein_coding MGP_NODShiLtJ_T0024355.1 MGP_NODShiLtJ_G0016877.1 mouse_genomes_project 10 8431199 8862353 - MGP_NODShiLtJ_P0024355 Grm1 protein_coding protein_coding MGP_NODShiLtJ_T0024356.1 MGP_NODShiLtJ_G0016877.1 mouse_genomes_project 10 8431846 8465267 - Grm1 protein_coding processed_transcript MGP_NODShiLtJ_T0024357.1 MGP_NODShiLtJ_G0016877.1 mouse_genomes_project 10 8493047 8495674 - Grm1 protein_coding processed_transcript MGP_NODShiLtJ_T0024358.1 MGP_NODShiLtJ_G0016877.1 mouse_genomes_project 10 8861885 8863631 - Grm1 protein_coding processed_transcript MGP_NODShiLtJ_T0025585.1 MGP_NODShiLtJ_G0017225.1 mouse_genomes_project 10 83853752 83861706 - MGP_NODShiLtJ_P0025585 Gstt4 protein_coding protein_coding MGP_NODShiLtJ_T0025586.1 MGP_NODShiLtJ_G0017225.1 mouse_genomes_project 10 83853753 83861690 - MGP_NODShiLtJ_P0025586 Gstt4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002988.1 MGP_NODShiLtJ_G0002791.1 mouse_genomes_project 10 68610860 68622550 + Hk1os antisense antisense MGP_NODShiLtJ_T0002989.1 MGP_NODShiLtJ_G0002791.1 mouse_genomes_project 10 68611211 68624424 + Hk1os antisense antisense MGP_NODShiLtJ_T0002990.1 MGP_NODShiLtJ_G0002791.1 mouse_genomes_project 10 68611226 68637307 + Hk1os antisense antisense MGP_NODShiLtJ_T0026037.1 MGP_NODShiLtJ_G0017355.1 mouse_genomes_project 10 88870514 88892743 + MGP_NODShiLtJ_P0026037 Apc2 protein_coding protein_coding MGP_NODShiLtJ_T0026038.1 MGP_NODShiLtJ_G0017355.1 mouse_genomes_project 10 88873583 88876858 + MGP_NODShiLtJ_P0026038 Apc2 protein_coding protein_coding MGP_NODShiLtJ_T0026039.1 MGP_NODShiLtJ_G0017355.1 mouse_genomes_project 10 88875339 88877852 + Apc2 protein_coding retained_intron MGP_NODShiLtJ_T0026040.1 MGP_NODShiLtJ_G0017355.1 mouse_genomes_project 10 88875526 88876844 + MGP_NODShiLtJ_P0026040 Apc2 protein_coding protein_coding MGP_NODShiLtJ_T0026041.1 MGP_NODShiLtJ_G0017355.1 mouse_genomes_project 10 88875527 88876903 + MGP_NODShiLtJ_P0026041 Apc2 protein_coding protein_coding MGP_NODShiLtJ_T0026042.1 MGP_NODShiLtJ_G0017355.1 mouse_genomes_project 10 88876316 88892736 + MGP_NODShiLtJ_P0026042 Apc2 protein_coding protein_coding MGP_NODShiLtJ_T0027370.1 MGP_NODShiLtJ_G0017768.1 mouse_genomes_project 10 145810350 145815201 + MGP_NODShiLtJ_P0027370 Olfr781 protein_coding protein_coding MGP_NODShiLtJ_T0027371.1 MGP_NODShiLtJ_G0017768.1 mouse_genomes_project 10 145814265 145815201 + MGP_NODShiLtJ_P0027371 Olfr781 protein_coding protein_coding MGP_NODShiLtJ_T0000800.1 MGP_NODShiLtJ_G0000731.1 mouse_genomes_project 10 86936144 86938897 - TEC TEC MGP_NODShiLtJ_T0024698.1 MGP_NODShiLtJ_G0016986.1 mouse_genomes_project 10 32083240 32204354 - MGP_NODShiLtJ_P0024698 Tpd52l1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024699.1 MGP_NODShiLtJ_G0016986.1 mouse_genomes_project 10 32083250 32204545 - MGP_NODShiLtJ_P0024699 Tpd52l1 protein_coding protein_coding MGP_NODShiLtJ_T0025469.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 80760001 82213896 + Pcdh15 protein_coding retained_intron MGP_NODShiLtJ_T0025470.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 80760094 81532610 + Pcdh15 protein_coding retained_intron MGP_NODShiLtJ_T0025471.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 80760112 81247542 + Pcdh15 protein_coding retained_intron MGP_NODShiLtJ_T0025472.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644652 82590194 + MGP_NODShiLtJ_P0025472 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025473.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644652 82576423 + MGP_NODShiLtJ_P0025473 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025474.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82590544 + MGP_NODShiLtJ_P0025474 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025475.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025475 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025476.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82590544 + MGP_NODShiLtJ_P0025476 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025477.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82590544 + MGP_NODShiLtJ_P0025477 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025478.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025478 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025479.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82592132 + MGP_NODShiLtJ_P0025479 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025480.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025480 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025481.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82590544 + MGP_NODShiLtJ_P0025481 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025482.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82590544 + MGP_NODShiLtJ_P0025482 Pcdh15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025483.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82592132 + MGP_NODShiLtJ_P0025483 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025484.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025484 Pcdh15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025485.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025485 Pcdh15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025486.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82590544 + MGP_NODShiLtJ_P0025486 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025487.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025487 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025488.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574188 + MGP_NODShiLtJ_P0025488 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025489.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82592296 + MGP_NODShiLtJ_P0025489 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025490.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82575250 + MGP_NODShiLtJ_P0025490 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025491.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025491 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025492.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025492 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025493.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82590544 + MGP_NODShiLtJ_P0025493 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025494.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82574316 + MGP_NODShiLtJ_P0025494 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025495.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82595551 + MGP_NODShiLtJ_P0025495 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025496.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644668 82590544 + MGP_NODShiLtJ_P0025496 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025497.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644728 82420913 + MGP_NODShiLtJ_P0025497 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025498.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644728 82420913 + MGP_NODShiLtJ_P0025498 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025499.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81644728 82420913 + MGP_NODShiLtJ_P0025499 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025500.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81785969 82590035 + MGP_NODShiLtJ_P0025500 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025501.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81785969 82591890 + MGP_NODShiLtJ_P0025501 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025502.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 81785969 82591986 + MGP_NODShiLtJ_P0025502 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025503.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 82197827 82229152 + Pcdh15 protein_coding processed_transcript MGP_NODShiLtJ_T0025504.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 82257762 82574319 + MGP_NODShiLtJ_P0025504 Pcdh15 protein_coding protein_coding MGP_NODShiLtJ_T0025505.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 82291685 82303805 + Pcdh15 protein_coding retained_intron MGP_NODShiLtJ_T0025506.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 82514869 82565226 + Pcdh15 protein_coding retained_intron MGP_NODShiLtJ_T0025507.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 82572563 82592032 + Pcdh15 protein_coding processed_transcript MGP_NODShiLtJ_T0025508.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 82573060 82579445 + Pcdh15 protein_coding retained_intron MGP_NODShiLtJ_T0025509.1 MGP_NODShiLtJ_G0017206.1 mouse_genomes_project 10 82573485 82587026 + Pcdh15 protein_coding processed_transcript MGP_NODShiLtJ_T0026445.1 MGP_NODShiLtJ_G0017462.1 mouse_genomes_project 10 94265056 94323686 - MGP_NODShiLtJ_P0026445 Cry1 protein_coding protein_coding MGP_NODShiLtJ_T0024852.1 MGP_NODShiLtJ_G0017042.1 mouse_genomes_project 10 44208533 44235634 - MGP_NODShiLtJ_P0024852 protein_coding protein_coding MGP_NODShiLtJ_T0024240.1 MGP_NODShiLtJ_G0016855.1 mouse_genomes_project 10 2951522 3059492 - MGP_NODShiLtJ_P0024240 Rgs17 protein_coding protein_coding MGP_NODShiLtJ_T0024241.1 MGP_NODShiLtJ_G0016855.1 mouse_genomes_project 10 2951522 3059478 - MGP_NODShiLtJ_P0024241 Rgs17 protein_coding protein_coding MGP_NODShiLtJ_T0024242.1 MGP_NODShiLtJ_G0016855.1 mouse_genomes_project 10 2955703 3059458 - MGP_NODShiLtJ_P0024242 Rgs17 protein_coding protein_coding MGP_NODShiLtJ_T0024243.1 MGP_NODShiLtJ_G0016855.1 mouse_genomes_project 10 2956618 3059458 - MGP_NODShiLtJ_P0024243 Rgs17 protein_coding protein_coding MGP_NODShiLtJ_T0006089.1 MGP_NODShiLtJ_G0005081.1 mouse_genomes_project 10 125097622 125098710 - Gm28592 lincRNA lincRNA MGP_NODShiLtJ_T0026356.1 MGP_NODShiLtJ_G0017432.1 mouse_genomes_project 10 90421253 90542346 + MGP_NODShiLtJ_P0026356 protein_coding protein_coding MGP_NODShiLtJ_T0026357.1 MGP_NODShiLtJ_G0017432.1 mouse_genomes_project 10 90421253 90423566 + MGP_NODShiLtJ_P0026357 protein_coding protein_coding MGP_NODShiLtJ_T0026890.1 MGP_NODShiLtJ_G0017599.1 mouse_genomes_project 10 129892271 129906648 - MGP_NODShiLtJ_P0026890 Thap2 protein_coding protein_coding MGP_NODShiLtJ_T0026520.1 MGP_NODShiLtJ_G0017485.1 mouse_genomes_project 10 97491477 97546274 - MGP_NODShiLtJ_P0026520 Parpbp protein_coding protein_coding MGP_NODShiLtJ_T0026521.1 MGP_NODShiLtJ_G0017485.1 mouse_genomes_project 10 97524042 97546211 - MGP_NODShiLtJ_P0026521 Parpbp protein_coding protein_coding MGP_NODShiLtJ_T0026522.1 MGP_NODShiLtJ_G0017485.1 mouse_genomes_project 10 97524062 97546266 - MGP_NODShiLtJ_P0026522 Parpbp protein_coding protein_coding MGP_NODShiLtJ_T0026523.1 MGP_NODShiLtJ_G0017485.1 mouse_genomes_project 10 97530252 97546211 - MGP_NODShiLtJ_P0026523 Parpbp protein_coding protein_coding MGP_NODShiLtJ_T0024411.1 MGP_NODShiLtJ_G0016888.1 mouse_genomes_project 10 11517873 11519487 + MGP_NODShiLtJ_P0024411 Fuca2 protein_coding protein_coding MGP_NODShiLtJ_T0024412.1 MGP_NODShiLtJ_G0016888.1 mouse_genomes_project 10 11517877 11525005 + MGP_NODShiLtJ_P0024412 Fuca2 protein_coding protein_coding MGP_NODShiLtJ_T0024413.1 MGP_NODShiLtJ_G0016888.1 mouse_genomes_project 10 11519310 11534668 + MGP_NODShiLtJ_P0024413 Fuca2 protein_coding protein_coding MGP_NODShiLtJ_T0024414.1 MGP_NODShiLtJ_G0016888.1 mouse_genomes_project 10 11519310 11538163 + MGP_NODShiLtJ_P0024414 Fuca2 protein_coding protein_coding MGP_NODShiLtJ_T0024415.1 MGP_NODShiLtJ_G0016888.1 mouse_genomes_project 10 11519393 11532223 + Fuca2 protein_coding retained_intron MGP_NODShiLtJ_T0024416.1 MGP_NODShiLtJ_G0016888.1 mouse_genomes_project 10 11525161 11534623 + Fuca2 protein_coding processed_transcript MGP_NODShiLtJ_T0003048.1 MGP_NODShiLtJ_G0002834.1 mouse_genomes_project 10 134507052 134507999 - Gm16321 antisense antisense MGP_NODShiLtJ_T0026587.1 MGP_NODShiLtJ_G0017502.1 mouse_genomes_project 10 99317283 99336984 - MGP_NODShiLtJ_P0026587 Actr6 protein_coding protein_coding MGP_NODShiLtJ_T0024517.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19586383 19621300 + MGP_NODShiLtJ_P0024517 Bclaf1 protein_coding protein_coding MGP_NODShiLtJ_T0024518.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19586386 19618411 + MGP_NODShiLtJ_P0024518 Bclaf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024519.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19586398 19621298 + MGP_NODShiLtJ_P0024519 Bclaf1 protein_coding protein_coding MGP_NODShiLtJ_T0024520.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19586414 19618202 + MGP_NODShiLtJ_P0024520 Bclaf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024521.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19586415 19603423 + MGP_NODShiLtJ_P0024521 Bclaf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0024522.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19586442 19599892 + Bclaf1 protein_coding retained_intron MGP_NODShiLtJ_T0024523.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19586443 19618407 + MGP_NODShiLtJ_P0024523 Bclaf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024524.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19586451 19618408 + MGP_NODShiLtJ_P0024524 Bclaf1 protein_coding protein_coding MGP_NODShiLtJ_T0024525.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19601016 19623415 + MGP_NODShiLtJ_P0024525 Bclaf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024526.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19603336 19610429 + MGP_NODShiLtJ_P0024526 Bclaf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024527.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19606339 19612061 + Bclaf1 protein_coding retained_intron MGP_NODShiLtJ_T0024528.1 MGP_NODShiLtJ_G0016920.1 mouse_genomes_project 10 19611424 19618351 + Bclaf1 protein_coding retained_intron MGP_NODShiLtJ_T0026904.1 MGP_NODShiLtJ_G0017603.1 mouse_genomes_project 10 130399171 130433905 + MGP_NODShiLtJ_P0026904 Tspan8 protein_coding protein_coding MGP_NODShiLtJ_T0026905.1 MGP_NODShiLtJ_G0017603.1 mouse_genomes_project 10 130399171 130433905 + MGP_NODShiLtJ_P0026905 Tspan8 protein_coding protein_coding MGP_NODShiLtJ_T0026906.1 MGP_NODShiLtJ_G0017603.1 mouse_genomes_project 10 130399171 130433905 + MGP_NODShiLtJ_P0026906 Tspan8 protein_coding protein_coding MGP_NODShiLtJ_T0006088.1 MGP_NODShiLtJ_G0005080.1 mouse_genomes_project 10 119081569 119085394 - C230021G24Rik lincRNA lincRNA MGP_NODShiLtJ_T0098615.1 MGP_NODShiLtJ_G0037009.1 mouse_genomes_project 10 47470079 47470167 - Gm22087 snRNA snRNA MGP_NODShiLtJ_T0025795.1 MGP_NODShiLtJ_G0017289.1 mouse_genomes_project 10 86953424 86964043 - MGP_NODShiLtJ_P0025795 Olfr1357 protein_coding protein_coding MGP_NODShiLtJ_T0025796.1 MGP_NODShiLtJ_G0017289.1 mouse_genomes_project 10 86953424 86954436 - MGP_NODShiLtJ_P0025796 Olfr1357 protein_coding protein_coding MGP_NODShiLtJ_T0025797.1 MGP_NODShiLtJ_G0017289.1 mouse_genomes_project 10 86953688 86964043 - MGP_NODShiLtJ_P0025797 Olfr1357 protein_coding protein_coding MGP_NODShiLtJ_T0026755.1 MGP_NODShiLtJ_G0017547.1 mouse_genomes_project 10 109762806 109862676 + MGP_NODShiLtJ_P0026755 Poc1b protein_coding protein_coding MGP_NODShiLtJ_T0026756.1 MGP_NODShiLtJ_G0017547.1 mouse_genomes_project 10 109762852 109861740 + MGP_NODShiLtJ_P0026756 Poc1b protein_coding protein_coding MGP_NODShiLtJ_T0026757.1 MGP_NODShiLtJ_G0017547.1 mouse_genomes_project 10 109762873 109862762 + MGP_NODShiLtJ_P0026757 Poc1b protein_coding protein_coding MGP_NODShiLtJ_T0026760.1 MGP_NODShiLtJ_G0017547.1 mouse_genomes_project 10 109787043 109855076 + MGP_NODShiLtJ_P0026760 Poc1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026761.1 MGP_NODShiLtJ_G0017547.1 mouse_genomes_project 10 109830570 109861716 + Poc1b protein_coding processed_transcript MGP_NODShiLtJ_T0026762.1 MGP_NODShiLtJ_G0017547.1 mouse_genomes_project 10 109855178 109861538 + Poc1b protein_coding processed_transcript MGP_NODShiLtJ_T0025119.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66364927 66742168 - MGP_NODShiLtJ_P0025119 Cdh23 protein_coding protein_coding MGP_NODShiLtJ_T0025120.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66364927 66742168 - MGP_NODShiLtJ_P0025120 Cdh23 protein_coding protein_coding MGP_NODShiLtJ_T0025121.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66364929 66784384 - MGP_NODShiLtJ_P0025121 Cdh23 protein_coding protein_coding MGP_NODShiLtJ_T0025122.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66364929 66784384 - MGP_NODShiLtJ_P0025122 Cdh23 protein_coding protein_coding MGP_NODShiLtJ_T0025123.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66364929 66784384 - MGP_NODShiLtJ_P0025123 Cdh23 protein_coding protein_coding MGP_NODShiLtJ_T0025124.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66365464 66396063 - Cdh23 protein_coding processed_transcript MGP_NODShiLtJ_T0025125.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66365464 66396063 - Cdh23 protein_coding processed_transcript MGP_NODShiLtJ_T0025126.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66365489 66742168 - Cdh23 protein_coding retained_intron MGP_NODShiLtJ_T0025127.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66365489 66742168 - Cdh23 protein_coding retained_intron MGP_NODShiLtJ_T0025128.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66365542 66378730 - Cdh23 protein_coding retained_intron MGP_NODShiLtJ_T0025135.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66453346 66464932 - Cdh23 protein_coding retained_intron MGP_NODShiLtJ_T0025136.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66454668 66484336 - Cdh23 protein_coding processed_transcript MGP_NODShiLtJ_T0025137.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66454762 66458089 - Cdh23 protein_coding processed_transcript MGP_NODShiLtJ_T0025139.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66665498 66784384 - Cdh23 protein_coding processed_transcript MGP_NODShiLtJ_T0025140.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66712439 66737868 - Cdh23 protein_coding processed_transcript MGP_NODShiLtJ_T0025141.1 MGP_NODShiLtJ_G0017128.1 mouse_genomes_project 10 66742100 66775151 - Cdh23 protein_coding processed_transcript MGP_NODShiLtJ_T0024786.1 MGP_NODShiLtJ_G0017020.1 mouse_genomes_project 10 42330272 42346364 - MGP_NODShiLtJ_P0024786 Mfsd4b3 protein_coding protein_coding MGP_NODShiLtJ_T0016976.1 MGP_NODShiLtJ_G0015001.1 mouse_genomes_project 10 19804937 19807776 - 4930403O15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0025098.1 MGP_NODShiLtJ_G0017123.1 mouse_genomes_project 10 66006922 66035435 - MGP_NODShiLtJ_P0025098 Anapc16 protein_coding protein_coding MGP_NODShiLtJ_T0025099.1 MGP_NODShiLtJ_G0017123.1 mouse_genomes_project 10 66007421 66035411 - MGP_NODShiLtJ_P0025099 Anapc16 protein_coding protein_coding MGP_NODShiLtJ_T0025100.1 MGP_NODShiLtJ_G0017123.1 mouse_genomes_project 10 66007917 66009897 - Anapc16 protein_coding processed_transcript MGP_NODShiLtJ_T0025101.1 MGP_NODShiLtJ_G0017123.1 mouse_genomes_project 10 66007936 66035295 - MGP_NODShiLtJ_P0025101 Anapc16 protein_coding protein_coding MGP_NODShiLtJ_T0025102.1 MGP_NODShiLtJ_G0017123.1 mouse_genomes_project 10 66007992 66035386 - MGP_NODShiLtJ_P0025102 Anapc16 protein_coding protein_coding MGP_NODShiLtJ_T0025103.1 MGP_NODShiLtJ_G0017123.1 mouse_genomes_project 10 66008099 66035069 - MGP_NODShiLtJ_P0025103 Anapc16 protein_coding protein_coding MGP_NODShiLtJ_T0025104.1 MGP_NODShiLtJ_G0017123.1 mouse_genomes_project 10 66009879 66010594 - Anapc16 protein_coding retained_intron MGP_NODShiLtJ_T0025105.1 MGP_NODShiLtJ_G0017123.1 mouse_genomes_project 10 66015326 66017790 - Anapc16 protein_coding retained_intron MGP_NODShiLtJ_T0024701.1 MGP_NODShiLtJ_G0016988.1 mouse_genomes_project 10 32454893 33910383 - MGP_NODShiLtJ_P0024701 protein_coding protein_coding MGP_NODShiLtJ_T0024702.1 MGP_NODShiLtJ_G0016988.1 mouse_genomes_project 10 33230220 33331057 - MGP_NODShiLtJ_P0024702 protein_coding protein_coding MGP_NODShiLtJ_T0024703.1 MGP_NODShiLtJ_G0016988.1 mouse_genomes_project 10 33909826 33910384 - MGP_NODShiLtJ_P0024703 protein_coding protein_coding MGP_NODShiLtJ_T0027247.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144550643 144577779 + Timeless protein_coding retained_intron MGP_NODShiLtJ_T0027248.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144550652 144577699 + MGP_NODShiLtJ_P0027248 Timeless protein_coding protein_coding MGP_NODShiLtJ_T0027249.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144550654 144570956 + MGP_NODShiLtJ_P0027249 Timeless protein_coding protein_coding MGP_NODShiLtJ_T0027250.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144550678 144566571 + MGP_NODShiLtJ_P0027250 Timeless protein_coding protein_coding MGP_NODShiLtJ_T0027251.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144550697 144577788 + MGP_NODShiLtJ_P0027251 Timeless protein_coding protein_coding MGP_NODShiLtJ_T0027252.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144564796 144577555 + MGP_NODShiLtJ_P0027252 Timeless protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027253.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144565296 144566511 + Timeless protein_coding retained_intron MGP_NODShiLtJ_T0027254.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144567234 144567909 + Timeless protein_coding retained_intron MGP_NODShiLtJ_T0027255.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144567303 144568777 + Timeless protein_coding processed_transcript MGP_NODShiLtJ_T0027256.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144567524 144568594 + Timeless protein_coding retained_intron MGP_NODShiLtJ_T0027257.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144572131 144572893 + Timeless protein_coding retained_intron MGP_NODShiLtJ_T0027258.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144572186 144577786 + Timeless protein_coding processed_transcript MGP_NODShiLtJ_T0027259.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144574059 144574707 + Timeless protein_coding retained_intron MGP_NODShiLtJ_T0027260.1 MGP_NODShiLtJ_G0017714.1 mouse_genomes_project 10 144574465 144575219 + Timeless protein_coding retained_intron MGP_NODShiLtJ_T0009546.1 MGP_NODShiLtJ_G0007679.1 mouse_genomes_project 10 142066712 142066785 + Gm22183 miRNA miRNA MGP_NODShiLtJ_T0024486.1 MGP_NODShiLtJ_G0016909.1 mouse_genomes_project 10 18174135 18188627 - MGP_NODShiLtJ_P0024486 Tnfaip3 protein_coding protein_coding MGP_NODShiLtJ_T0024487.1 MGP_NODShiLtJ_G0016909.1 mouse_genomes_project 10 18174138 18185183 - MGP_NODShiLtJ_P0024487 Tnfaip3 protein_coding protein_coding MGP_NODShiLtJ_T0024488.1 MGP_NODShiLtJ_G0016909.1 mouse_genomes_project 10 18174154 18188593 - Tnfaip3 protein_coding retained_intron MGP_NODShiLtJ_T0024489.1 MGP_NODShiLtJ_G0016909.1 mouse_genomes_project 10 18180487 18182062 - Tnfaip3 protein_coding retained_intron MGP_NODShiLtJ_T0024490.1 MGP_NODShiLtJ_G0016909.1 mouse_genomes_project 10 18181482 18188874 - MGP_NODShiLtJ_P0024490 Tnfaip3 protein_coding protein_coding MGP_NODShiLtJ_T0024491.1 MGP_NODShiLtJ_G0016909.1 mouse_genomes_project 10 18184735 18187795 - MGP_NODShiLtJ_P0024491 Tnfaip3 protein_coding protein_coding MGP_NODShiLtJ_T0026398.1 MGP_NODShiLtJ_G0017447.1 mouse_genomes_project 10 92167369 92276575 - MGP_NODShiLtJ_P0026398 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026399.1 MGP_NODShiLtJ_G0017447.1 mouse_genomes_project 10 92244277 92249703 - protein_coding processed_transcript MGP_NODShiLtJ_T0026400.1 MGP_NODShiLtJ_G0017447.1 mouse_genomes_project 10 92264629 92272490 - MGP_NODShiLtJ_P0026400 protein_coding protein_coding MGP_NODShiLtJ_T0026401.1 MGP_NODShiLtJ_G0017447.1 mouse_genomes_project 10 92264756 92287696 - MGP_NODShiLtJ_P0026401 protein_coding protein_coding MGP_NODShiLtJ_T0026402.1 MGP_NODShiLtJ_G0017447.1 mouse_genomes_project 10 92264986 92284743 - MGP_NODShiLtJ_P0026402 protein_coding protein_coding MGP_NODShiLtJ_T0027080.1 MGP_NODShiLtJ_G0017661.1 mouse_genomes_project 10 143188965 143199440 - MGP_NODShiLtJ_P0027080 Mettl21b protein_coding protein_coding MGP_NODShiLtJ_T0025358.1 MGP_NODShiLtJ_G0017189.1 mouse_genomes_project 10 75571346 75697208 - MGP_NODShiLtJ_P0025358 1700040L02Rik protein_coding protein_coding MGP_NODShiLtJ_T0025359.1 MGP_NODShiLtJ_G0017189.1 mouse_genomes_project 10 75577424 75680370 - MGP_NODShiLtJ_P0025359 1700040L02Rik protein_coding protein_coding MGP_NODShiLtJ_T0025129.1 MGP_NODShiLtJ_G0017129.1 mouse_genomes_project 10 66423801 66450590 + MGP_NODShiLtJ_P0025129 Vsir protein_coding protein_coding MGP_NODShiLtJ_T0025130.1 MGP_NODShiLtJ_G0017129.1 mouse_genomes_project 10 66423855 66435934 + Vsir protein_coding processed_transcript MGP_NODShiLtJ_T0025131.1 MGP_NODShiLtJ_G0017129.1 mouse_genomes_project 10 66423857 66435716 + Vsir protein_coding processed_transcript MGP_NODShiLtJ_T0025132.1 MGP_NODShiLtJ_G0017129.1 mouse_genomes_project 10 66423934 66436966 + Vsir protein_coding retained_intron MGP_NODShiLtJ_T0025133.1 MGP_NODShiLtJ_G0017129.1 mouse_genomes_project 10 66423962 66445674 + MGP_NODShiLtJ_P0025133 Vsir protein_coding protein_coding MGP_NODShiLtJ_T0025134.1 MGP_NODShiLtJ_G0017129.1 mouse_genomes_project 10 66423972 66450574 + MGP_NODShiLtJ_P0025134 Vsir protein_coding protein_coding MGP_NODShiLtJ_T0009536.1 MGP_NODShiLtJ_G0007669.1 mouse_genomes_project 10 120409823 120409952 + Gm44403 miRNA miRNA MGP_NODShiLtJ_T0024483.1 MGP_NODShiLtJ_G0016906.1 mouse_genomes_project 10 17747352 17916135 - MGP_NODShiLtJ_P0024483 Arfgef3 protein_coding protein_coding MGP_NODShiLtJ_T0026764.1 MGP_NODShiLtJ_G0017551.1 mouse_genomes_project 10 110140654 110143935 + MGP_NODShiLtJ_P0026764 Gad1-ps protein_coding protein_coding MGP_NODShiLtJ_T0027333.1 MGP_NODShiLtJ_G0017747.1 mouse_genomes_project 10 145245307 145300570 + MGP_NODShiLtJ_P0027333 Sarnp protein_coding protein_coding MGP_NODShiLtJ_T0024802.1 MGP_NODShiLtJ_G0017026.1 mouse_genomes_project 10 42721162 42732856 - MGP_NODShiLtJ_P0024802 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0002964.1 MGP_NODShiLtJ_G0002772.1 mouse_genomes_project 10 12231086 12236916 - Gm28289 antisense antisense MGP_NODShiLtJ_T0099859.1 MGP_NODShiLtJ_G0038253.1 mouse_genomes_project 10 64612016 64612092 - Gm25055 snoRNA snoRNA MGP_NODShiLtJ_T0025608.1 MGP_NODShiLtJ_G0017235.1 mouse_genomes_project 10 84131324 84201043 - MGP_NODShiLtJ_P0025608 Slc5a4b protein_coding protein_coding MGP_NODShiLtJ_T0006106.1 MGP_NODShiLtJ_G0005094.1 mouse_genomes_project 10 145460399 145487175 - lincRNA lincRNA MGP_NODShiLtJ_T0026765.1 MGP_NODShiLtJ_G0017552.1 mouse_genomes_project 10 110466391 110468342 - MGP_NODShiLtJ_P0026765 Csl protein_coding protein_coding MGP_NODShiLtJ_T0026977.1 MGP_NODShiLtJ_G0017630.1 mouse_genomes_project 10 133856837 133866365 - MGP_NODShiLtJ_P0026977 Dyrk2 protein_coding protein_coding MGP_NODShiLtJ_T0026534.1 MGP_NODShiLtJ_G0017488.1 mouse_genomes_project 10 97736978 97772923 - MGP_NODShiLtJ_P0026534 Dram1 protein_coding protein_coding MGP_NODShiLtJ_T0026535.1 MGP_NODShiLtJ_G0017488.1 mouse_genomes_project 10 97736978 97772844 - MGP_NODShiLtJ_P0026535 Dram1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026536.1 MGP_NODShiLtJ_G0017488.1 mouse_genomes_project 10 97755741 97798516 - MGP_NODShiLtJ_P0026536 Dram1 protein_coding protein_coding MGP_NODShiLtJ_T0025432.1 MGP_NODShiLtJ_G0017197.1 mouse_genomes_project 10 77824384 77954231 + MGP_NODShiLtJ_P0025432 Fam13c protein_coding protein_coding MGP_NODShiLtJ_T0025433.1 MGP_NODShiLtJ_G0017197.1 mouse_genomes_project 10 77824596 77954231 + MGP_NODShiLtJ_P0025433 Fam13c protein_coding protein_coding MGP_NODShiLtJ_T0025434.1 MGP_NODShiLtJ_G0017197.1 mouse_genomes_project 10 77824642 77954233 + MGP_NODShiLtJ_P0025434 Fam13c protein_coding protein_coding MGP_NODShiLtJ_T0026661.1 MGP_NODShiLtJ_G0017511.1 mouse_genomes_project 10 103053903 103138690 + MGP_NODShiLtJ_P0026661 Cdk17 protein_coding protein_coding MGP_NODShiLtJ_T0006007.1 MGP_NODShiLtJ_G0005026.1 mouse_genomes_project 10 7637999 7813418 + Gm28905 lincRNA lincRNA MGP_NODShiLtJ_T0024640.1 MGP_NODShiLtJ_G0016966.1 mouse_genomes_project 10 26201253 26247066 + MGP_NODShiLtJ_P0024640 Samd3 protein_coding protein_coding MGP_NODShiLtJ_T0024641.1 MGP_NODShiLtJ_G0016966.1 mouse_genomes_project 10 26201253 26233616 + MGP_NODShiLtJ_P0024641 Samd3 protein_coding protein_coding MGP_NODShiLtJ_T0026876.1 MGP_NODShiLtJ_G0017590.1 mouse_genomes_project 10 125842541 125930654 + MGP_NODShiLtJ_P0026876 protein_coding protein_coding MGP_NODShiLtJ_T0026877.1 MGP_NODShiLtJ_G0017590.1 mouse_genomes_project 10 125844647 125930215 + MGP_NODShiLtJ_P0026877 protein_coding protein_coding MGP_NODShiLtJ_T0027408.1 MGP_NODShiLtJ_G0017797.1 mouse_genomes_project 10 146563923 146564862 - MGP_NODShiLtJ_P0027408 Olfr816 protein_coding protein_coding MGP_NODShiLtJ_T0027420.1 MGP_NODShiLtJ_G0017808.1 mouse_genomes_project 10 147106633 147144082 + MGP_NODShiLtJ_P0027420 Tespa1 protein_coding protein_coding MGP_NODShiLtJ_T0098658.1 MGP_NODShiLtJ_G0037052.1 mouse_genomes_project 10 143313676 143313765 - Gm23664 snRNA snRNA MGP_NODShiLtJ_T0025670.1 MGP_NODShiLtJ_G0017252.1 mouse_genomes_project 10 85210940 85335346 - MGP_NODShiLtJ_P0025670 Col18a1 protein_coding protein_coding MGP_NODShiLtJ_T0025671.1 MGP_NODShiLtJ_G0017252.1 mouse_genomes_project 10 85210943 85277130 - MGP_NODShiLtJ_P0025671 Col18a1 protein_coding protein_coding MGP_NODShiLtJ_T0025672.1 MGP_NODShiLtJ_G0017252.1 mouse_genomes_project 10 85211778 85277159 - MGP_NODShiLtJ_P0025672 Col18a1 protein_coding protein_coding MGP_NODShiLtJ_T0025673.1 MGP_NODShiLtJ_G0017252.1 mouse_genomes_project 10 85239520 85249285 - MGP_NODShiLtJ_P0025673 Col18a1 protein_coding protein_coding MGP_NODShiLtJ_T0025674.1 MGP_NODShiLtJ_G0017252.1 mouse_genomes_project 10 85256165 85277400 - MGP_NODShiLtJ_P0025674 Col18a1 protein_coding protein_coding MGP_NODShiLtJ_T0012333.1 MGP_NODShiLtJ_G0010441.1 mouse_genomes_project 10 146883077 146891664 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099848.1 MGP_NODShiLtJ_G0038242.1 mouse_genomes_project 10 38720756 38720903 - Gm22554 snoRNA snoRNA MGP_NODShiLtJ_T0012275.1 MGP_NODShiLtJ_G0010383.1 mouse_genomes_project 10 23792106 23792721 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026427.1 MGP_NODShiLtJ_G0017453.1 mouse_genomes_project 10 93425405 93498913 - MGP_NODShiLtJ_P0026427 Nuak1 protein_coding protein_coding MGP_NODShiLtJ_T0026428.1 MGP_NODShiLtJ_G0017453.1 mouse_genomes_project 10 93429796 93447846 - MGP_NODShiLtJ_P0026428 Nuak1 protein_coding protein_coding MGP_NODShiLtJ_T0097877.1 MGP_NODShiLtJ_G0036289.1 mouse_genomes_project 10 26338165 26338265 + Gm23757 rRNA rRNA MGP_NODShiLtJ_T0026212.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89933609 89945246 + MGP_NODShiLtJ_P0026212 Matk protein_coding protein_coding MGP_NODShiLtJ_T0026213.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89939559 89945626 + MGP_NODShiLtJ_P0026213 Matk protein_coding protein_coding MGP_NODShiLtJ_T0026214.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89939559 89945626 + MGP_NODShiLtJ_P0026214 Matk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026215.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89939559 89945242 + MGP_NODShiLtJ_P0026215 Matk protein_coding protein_coding MGP_NODShiLtJ_T0026216.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89939565 89945242 + MGP_NODShiLtJ_P0026216 Matk protein_coding protein_coding MGP_NODShiLtJ_T0026217.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89939602 89945246 + Matk protein_coding retained_intron MGP_NODShiLtJ_T0026218.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89939708 89942787 + Matk protein_coding retained_intron MGP_NODShiLtJ_T0026219.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89940090 89941914 + MGP_NODShiLtJ_P0026219 Matk protein_coding protein_coding MGP_NODShiLtJ_T0026220.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89940178 89945236 + MGP_NODShiLtJ_P0026220 Matk protein_coding protein_coding MGP_NODShiLtJ_T0026221.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89940475 89945174 + Matk protein_coding retained_intron MGP_NODShiLtJ_T0026222.1 MGP_NODShiLtJ_G0017406.1 mouse_genomes_project 10 89943430 89944928 + Matk protein_coding retained_intron MGP_NODShiLtJ_T0012300.1 MGP_NODShiLtJ_G0010408.1 mouse_genomes_project 10 79469883 79470688 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026503.1 MGP_NODShiLtJ_G0017480.1 mouse_genomes_project 10 96368594 96528621 + MGP_NODShiLtJ_P0026503 1700113H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0026504.1 MGP_NODShiLtJ_G0017480.1 mouse_genomes_project 10 96368595 96528620 + MGP_NODShiLtJ_P0026504 1700113H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0026505.1 MGP_NODShiLtJ_G0017480.1 mouse_genomes_project 10 96504289 96528619 + MGP_NODShiLtJ_P0026505 1700113H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0009551.1 MGP_NODShiLtJ_G0007684.1 mouse_genomes_project 10 144741357 144741426 - Gm26308 miRNA miRNA MGP_NODShiLtJ_T0026840.1 MGP_NODShiLtJ_G0017578.1 mouse_genomes_project 10 123056365 123482735 - MGP_NODShiLtJ_P0026840 Nav3 protein_coding protein_coding MGP_NODShiLtJ_T0026841.1 MGP_NODShiLtJ_G0017578.1 mouse_genomes_project 10 123056365 123236022 - MGP_NODShiLtJ_P0026841 Nav3 protein_coding protein_coding MGP_NODShiLtJ_T0026842.1 MGP_NODShiLtJ_G0017578.1 mouse_genomes_project 10 123092230 123102387 - Nav3 protein_coding processed_transcript MGP_NODShiLtJ_T0026843.1 MGP_NODShiLtJ_G0017578.1 mouse_genomes_project 10 123140355 123152853 - MGP_NODShiLtJ_P0026843 Nav3 protein_coding protein_coding MGP_NODShiLtJ_T0026844.1 MGP_NODShiLtJ_G0017578.1 mouse_genomes_project 10 123317074 123347880 - Nav3 protein_coding retained_intron MGP_NODShiLtJ_T0026845.1 MGP_NODShiLtJ_G0017578.1 mouse_genomes_project 10 123337443 124016424 - Nav3 protein_coding retained_intron MGP_NODShiLtJ_T0025259.1 MGP_NODShiLtJ_G0017162.1 mouse_genomes_project 10 68869304 68892317 - MGP_NODShiLtJ_P0025259 Ddx21 protein_coding protein_coding MGP_NODShiLtJ_T0099887.1 MGP_NODShiLtJ_G0038281.1 mouse_genomes_project 10 135789021 135789081 + Gm24298 snoRNA snoRNA MGP_NODShiLtJ_T0024999.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58745886 58876280 - MGP_NODShiLtJ_P0024999 Fam184a protein_coding protein_coding MGP_NODShiLtJ_T0025000.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58746107 58815695 - MGP_NODShiLtJ_P0025000 Fam184a protein_coding protein_coding MGP_NODShiLtJ_T0025001.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58746110 58769819 - MGP_NODShiLtJ_P0025001 Fam184a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025002.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58746111 58820215 - MGP_NODShiLtJ_P0025002 Fam184a protein_coding protein_coding MGP_NODShiLtJ_T0025003.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58746371 58760951 - MGP_NODShiLtJ_P0025003 Fam184a protein_coding protein_coding MGP_NODShiLtJ_T0025004.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58746375 58752167 - MGP_NODShiLtJ_P0025004 Fam184a protein_coding protein_coding MGP_NODShiLtJ_T0025005.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58746375 58876172 - MGP_NODShiLtJ_P0025005 Fam184a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025006.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58752077 58798799 - Fam184a protein_coding processed_transcript MGP_NODShiLtJ_T0025007.1 MGP_NODShiLtJ_G0017093.1 mouse_genomes_project 10 58817868 58876309 - Fam184a protein_coding retained_intron MGP_NODShiLtJ_T0009506.1 MGP_NODShiLtJ_G0007639.1 mouse_genomes_project 10 86728676 86728747 - Mir6907 miRNA miRNA MGP_NODShiLtJ_T0026494.1 MGP_NODShiLtJ_G0017478.1 mouse_genomes_project 10 96075535 96129759 + MGP_NODShiLtJ_P0026494 protein_coding protein_coding MGP_NODShiLtJ_T0026779.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111406328 111419440 + MGP_NODShiLtJ_P0026779 1700017N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0026780.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111409773 111436962 + MGP_NODShiLtJ_P0026780 1700017N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0026781.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111409773 111436884 + MGP_NODShiLtJ_P0026781 1700017N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0026782.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111409773 111436968 + MGP_NODShiLtJ_P0026782 1700017N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0026783.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111409773 111436882 + MGP_NODShiLtJ_P0026783 1700017N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0026784.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111409773 111436972 + MGP_NODShiLtJ_P0026784 1700017N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0026785.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111409773 111436962 + MGP_NODShiLtJ_P0026785 1700017N19Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026786.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111410238 111429987 + MGP_NODShiLtJ_P0026786 1700017N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0026787.1 MGP_NODShiLtJ_G0017559.1 mouse_genomes_project 10 111426623 111436879 + MGP_NODShiLtJ_P0026787 1700017N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0026130.1 MGP_NODShiLtJ_G0017379.1 mouse_genomes_project 10 89439000 89441527 - MGP_NODShiLtJ_P0026130 Plekhj1 protein_coding protein_coding MGP_NODShiLtJ_T0027099.1 MGP_NODShiLtJ_G0017666.1 mouse_genomes_project 10 143231636 143234581 - MGP_NODShiLtJ_P0027099 Tspan31 protein_coding protein_coding MGP_NODShiLtJ_T0026464.1 MGP_NODShiLtJ_G0017468.1 mouse_genomes_project 10 95185862 95207620 - MGP_NODShiLtJ_P0026464 Rtcb protein_coding protein_coding MGP_NODShiLtJ_T0026465.1 MGP_NODShiLtJ_G0017468.1 mouse_genomes_project 10 95197083 95203997 - Rtcb protein_coding retained_intron MGP_NODShiLtJ_T0012280.1 MGP_NODShiLtJ_G0010388.1 mouse_genomes_project 10 41767016 41767395 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027327.1 MGP_NODShiLtJ_G0017743.1 mouse_genomes_project 10 145202363 145212235 + MGP_NODShiLtJ_P0027327 Mmp19 protein_coding protein_coding MGP_NODShiLtJ_T0024685.1 MGP_NODShiLtJ_G0016980.1 mouse_genomes_project 10 31188465 31281691 - MGP_NODShiLtJ_P0024685 Trmt11 protein_coding protein_coding MGP_NODShiLtJ_T0012267.1 MGP_NODShiLtJ_G0010375.1 mouse_genomes_project 10 11956699 11957707 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0026109.1 MGP_NODShiLtJ_G0017372.1 mouse_genomes_project 10 89251559 89270673 + MGP_NODShiLtJ_P0026109 Csnk1g2 protein_coding protein_coding MGP_NODShiLtJ_T0026110.1 MGP_NODShiLtJ_G0017372.1 mouse_genomes_project 10 89259563 89270673 + MGP_NODShiLtJ_P0026110 Csnk1g2 protein_coding protein_coding MGP_NODShiLtJ_T0000808.1 MGP_NODShiLtJ_G0000738.1 mouse_genomes_project 10 120356086 120357025 - TEC TEC MGP_NODShiLtJ_T0024742.1 MGP_NODShiLtJ_G0017010.1 mouse_genomes_project 10 41098085 41099324 - MGP_NODShiLtJ_P0024742 Rfpl4b protein_coding protein_coding MGP_NODShiLtJ_T0012312.1 MGP_NODShiLtJ_G0010420.1 mouse_genomes_project 10 90416937 90417389 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0025338.1 MGP_NODShiLtJ_G0017183.1 mouse_genomes_project 10 74621236 74625957 + MGP_NODShiLtJ_P0025338 Egr2 protein_coding protein_coding MGP_NODShiLtJ_T0025339.1 MGP_NODShiLtJ_G0017183.1 mouse_genomes_project 10 74621344 74626092 + MGP_NODShiLtJ_P0025339 Egr2 protein_coding protein_coding MGP_NODShiLtJ_T0025340.1 MGP_NODShiLtJ_G0017183.1 mouse_genomes_project 10 74623579 74627899 + MGP_NODShiLtJ_P0025340 Egr2 protein_coding protein_coding MGP_NODShiLtJ_T0025341.1 MGP_NODShiLtJ_G0017183.1 mouse_genomes_project 10 74623580 74627899 + MGP_NODShiLtJ_P0025341 Egr2 protein_coding protein_coding MGP_NODShiLtJ_T0025342.1 MGP_NODShiLtJ_G0017183.1 mouse_genomes_project 10 74623580 74624091 + MGP_NODShiLtJ_P0025342 Egr2 protein_coding protein_coding MGP_NODShiLtJ_T0025343.1 MGP_NODShiLtJ_G0017183.1 mouse_genomes_project 10 74623640 74625652 + MGP_NODShiLtJ_P0025343 Egr2 protein_coding protein_coding MGP_NODShiLtJ_T0025344.1 MGP_NODShiLtJ_G0017183.1 mouse_genomes_project 10 74624393 74627899 + MGP_NODShiLtJ_P0025344 Egr2 protein_coding protein_coding MGP_NODShiLtJ_T0025650.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84905182 84969740 - MGP_NODShiLtJ_P0025650 Pcbp3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0025651.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84905187 85118135 - MGP_NODShiLtJ_P0025651 Pcbp3 protein_coding protein_coding MGP_NODShiLtJ_T0025652.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84905188 84966098 - Pcbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0025653.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84905188 84969170 - MGP_NODShiLtJ_P0025653 Pcbp3 protein_coding protein_coding MGP_NODShiLtJ_T0025654.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84905190 85118234 - MGP_NODShiLtJ_P0025654 Pcbp3 protein_coding protein_coding MGP_NODShiLtJ_T0025655.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84905562 84941183 - Pcbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0025656.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84905700 84931741 - MGP_NODShiLtJ_P0025656 Pcbp3 protein_coding protein_coding MGP_NODShiLtJ_T0025657.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84906635 84960018 - MGP_NODShiLtJ_P0025657 Pcbp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025658.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84933121 85053608 - Pcbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0025659.1 MGP_NODShiLtJ_G0017249.1 mouse_genomes_project 10 84941166 84962708 - Pcbp3 protein_coding processed_transcript MGP_NODShiLtJ_T0024566.1 MGP_NODShiLtJ_G0016932.1 mouse_genomes_project 10 21678917 21872924 + MGP_NODShiLtJ_P0024566 protein_coding protein_coding MGP_NODShiLtJ_T0024567.1 MGP_NODShiLtJ_G0016932.1 mouse_genomes_project 10 21679315 21872927 + MGP_NODShiLtJ_P0024567 protein_coding protein_coding MGP_NODShiLtJ_T0024976.1 MGP_NODShiLtJ_G0017081.1 mouse_genomes_project 10 56996106 57154461 - MGP_NODShiLtJ_P0024976 Ros1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024977.1 MGP_NODShiLtJ_G0017081.1 mouse_genomes_project 10 56996311 57154749 - MGP_NODShiLtJ_P0024977 Ros1 protein_coding protein_coding MGP_NODShiLtJ_T0024978.1 MGP_NODShiLtJ_G0017081.1 mouse_genomes_project 10 56996401 57154461 - MGP_NODShiLtJ_P0024978 Ros1 protein_coding protein_coding MGP_NODShiLtJ_T0024979.1 MGP_NODShiLtJ_G0017081.1 mouse_genomes_project 10 56996401 57154461 - MGP_NODShiLtJ_P0024979 Ros1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025766.1 MGP_NODShiLtJ_G0017277.1 mouse_genomes_project 10 86313280 86317233 + Dnmt3l protein_coding processed_transcript MGP_NODShiLtJ_T0025767.1 MGP_NODShiLtJ_G0017277.1 mouse_genomes_project 10 86313620 86338331 + MGP_NODShiLtJ_P0025767 Dnmt3l protein_coding protein_coding MGP_NODShiLtJ_T0025768.1 MGP_NODShiLtJ_G0017277.1 mouse_genomes_project 10 86322130 86338331 + MGP_NODShiLtJ_P0025768 Dnmt3l protein_coding protein_coding MGP_NODShiLtJ_T0025769.1 MGP_NODShiLtJ_G0017277.1 mouse_genomes_project 10 86322247 86338325 + MGP_NODShiLtJ_P0025769 Dnmt3l protein_coding protein_coding MGP_NODShiLtJ_T0025770.1 MGP_NODShiLtJ_G0017277.1 mouse_genomes_project 10 86327126 86329663 + Dnmt3l protein_coding retained_intron MGP_NODShiLtJ_T0025771.1 MGP_NODShiLtJ_G0017277.1 mouse_genomes_project 10 86327626 86338324 + MGP_NODShiLtJ_P0025771 Dnmt3l protein_coding protein_coding MGP_NODShiLtJ_T0025772.1 MGP_NODShiLtJ_G0017277.1 mouse_genomes_project 10 86327626 86338324 + MGP_NODShiLtJ_P0025772 Dnmt3l protein_coding protein_coding MGP_NODShiLtJ_T0025773.1 MGP_NODShiLtJ_G0017277.1 mouse_genomes_project 10 86327626 86338324 + MGP_NODShiLtJ_P0025773 Dnmt3l protein_coding protein_coding MGP_NODShiLtJ_T0024576.1 MGP_NODShiLtJ_G0016936.1 mouse_genomes_project 10 22757250 23015210 - MGP_NODShiLtJ_P0024576 Eya4 protein_coding protein_coding MGP_NODShiLtJ_T0024577.1 MGP_NODShiLtJ_G0016936.1 mouse_genomes_project 10 22757845 23015202 - MGP_NODShiLtJ_P0024577 Eya4 protein_coding protein_coding MGP_NODShiLtJ_T0025016.1 MGP_NODShiLtJ_G0017098.1 mouse_genomes_project 10 62413058 62416196 + MGP_NODShiLtJ_P0025016 Gm9956 protein_coding protein_coding MGP_NODShiLtJ_T0025920.1 MGP_NODShiLtJ_G0017330.1 mouse_genomes_project 10 88448788 88455597 - MGP_NODShiLtJ_P0025920 R3hdm4 protein_coding protein_coding MGP_NODShiLtJ_T0025921.1 MGP_NODShiLtJ_G0017330.1 mouse_genomes_project 10 88448973 88455673 - MGP_NODShiLtJ_P0025921 R3hdm4 protein_coding protein_coding MGP_NODShiLtJ_T0099891.1 MGP_NODShiLtJ_G0038285.1 mouse_genomes_project 10 144363221 144363293 + Mir677 snoRNA snoRNA MGP_NODShiLtJ_T0024912.1 MGP_NODShiLtJ_G0017056.1 mouse_genomes_project 10 45968437 46165823 + MGP_NODShiLtJ_P0024912 Pdss2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0024913.1 MGP_NODShiLtJ_G0017056.1 mouse_genomes_project 10 45968437 46204060 + MGP_NODShiLtJ_P0024913 Pdss2 protein_coding protein_coding MGP_NODShiLtJ_T0024914.1 MGP_NODShiLtJ_G0017056.1 mouse_genomes_project 10 45968468 46101578 + Pdss2 protein_coding retained_intron MGP_NODShiLtJ_T0024915.1 MGP_NODShiLtJ_G0017056.1 mouse_genomes_project 10 45968551 46229486 + MGP_NODShiLtJ_P0024915 Pdss2 protein_coding protein_coding MGP_NODShiLtJ_T0024916.1 MGP_NODShiLtJ_G0017056.1 mouse_genomes_project 10 45968687 46101175 + Pdss2 protein_coding retained_intron MGP_NODShiLtJ_T0024917.1 MGP_NODShiLtJ_G0017056.1 mouse_genomes_project 10 46151875 46203706 + MGP_NODShiLtJ_P0024917 Pdss2 protein_coding protein_coding MGP_NODShiLtJ_T0026384.1 MGP_NODShiLtJ_G0017442.1 mouse_genomes_project 10 91608991 91621898 + Hcfc2 protein_coding processed_transcript MGP_NODShiLtJ_T0026385.1 MGP_NODShiLtJ_G0017442.1 mouse_genomes_project 10 91611848 91655910 + MGP_NODShiLtJ_P0026385 Hcfc2 protein_coding protein_coding MGP_NODShiLtJ_T0026386.1 MGP_NODShiLtJ_G0017442.1 mouse_genomes_project 10 91612052 91625071 + MGP_NODShiLtJ_P0026386 Hcfc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0026387.1 MGP_NODShiLtJ_G0017442.1 mouse_genomes_project 10 91641168 91654826 + MGP_NODShiLtJ_P0026387 Hcfc2 protein_coding protein_coding MGP_NODShiLtJ_T0026062.1 MGP_NODShiLtJ_G0017360.1 mouse_genomes_project 10 88954055 88964296 + MGP_NODShiLtJ_P0026062 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0026063.1 MGP_NODShiLtJ_G0017360.1 mouse_genomes_project 10 88955469 88958020 + protein_coding retained_intron MGP_NODShiLtJ_T0026064.1 MGP_NODShiLtJ_G0017360.1 mouse_genomes_project 10 88956762 88958278 + protein_coding retained_intron MGP_NODShiLtJ_T0009494.1 MGP_NODShiLtJ_G0007627.1 mouse_genomes_project 10 66170695 66170753 + Mir6906 miRNA miRNA MGP_NODShiLtJ_T0024194.1 MGP_NODShiLtJ_G0016842.1 mouse_genomes_project 10 917952 1119323 + MGP_NODShiLtJ_P0024194 Mthfd1l protein_coding protein_coding MGP_NODShiLtJ_T0024195.1 MGP_NODShiLtJ_G0016842.1 mouse_genomes_project 10 917965 1130124 + MGP_NODShiLtJ_P0024195 Mthfd1l protein_coding protein_coding MGP_NODShiLtJ_T0024196.1 MGP_NODShiLtJ_G0016842.1 mouse_genomes_project 10 917978 1119323 + MGP_NODShiLtJ_P0024196 Mthfd1l protein_coding protein_coding MGP_NODShiLtJ_T0024197.1 MGP_NODShiLtJ_G0016842.1 mouse_genomes_project 10 983851 1003766 + Mthfd1l protein_coding processed_transcript MGP_NODShiLtJ_T0012307.1 MGP_NODShiLtJ_G0010415.1 mouse_genomes_project 10 84031975 84032249 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002973.1 MGP_NODShiLtJ_G0002780.1 mouse_genomes_project 10 41903783 41905760 - Gm16364 antisense antisense MGP_NODShiLtJ_T0098638.1 MGP_NODShiLtJ_G0037032.1 mouse_genomes_project 10 93899393 93899490 - Gm24226 snRNA snRNA MGP_NODShiLtJ_T0011163.1 MGP_NODShiLtJ_G0009296.1 mouse_genomes_project 10 77892490 77892802 - Gm22320 misc_RNA misc_RNA MGP_NODShiLtJ_T0000809.1 MGP_NODShiLtJ_G0000739.1 mouse_genomes_project 10 123517749 123518041 - TEC TEC MGP_NODShiLtJ_T0025444.1 MGP_NODShiLtJ_G0017199.1 mouse_genomes_project 10 78293155 78347857 + MGP_NODShiLtJ_P0025444 4930533K18Rik protein_coding protein_coding MGP_NODShiLtJ_T0024537.1 MGP_NODShiLtJ_G0016923.1 mouse_genomes_project 10 20300355 20446932 + MGP_NODShiLtJ_P0024537 protein_coding protein_coding MGP_NODShiLtJ_T0024538.1 MGP_NODShiLtJ_G0016923.1 mouse_genomes_project 10 20401601 20446932 + MGP_NODShiLtJ_P0024538 protein_coding protein_coding MGP_NODShiLtJ_T0025855.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88255969 88267593 - Polrmt protein_coding retained_intron MGP_NODShiLtJ_T0025856.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88255973 88259208 - MGP_NODShiLtJ_P0025856 Polrmt protein_coding protein_coding MGP_NODShiLtJ_T0025857.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88255974 88267593 - Polrmt protein_coding retained_intron MGP_NODShiLtJ_T0025858.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88255975 88256617 - Polrmt protein_coding processed_transcript MGP_NODShiLtJ_T0025859.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88255976 88267601 - MGP_NODShiLtJ_P0025859 Polrmt protein_coding protein_coding MGP_NODShiLtJ_T0025860.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88255976 88267599 - MGP_NODShiLtJ_P0025860 Polrmt protein_coding protein_coding MGP_NODShiLtJ_T0025861.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88256018 88256602 - Polrmt protein_coding retained_intron MGP_NODShiLtJ_T0025862.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88256019 88257547 - Polrmt protein_coding retained_intron MGP_NODShiLtJ_T0025863.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88256020 88267591 - MGP_NODShiLtJ_P0025863 Polrmt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0025864.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88256053 88257520 - Polrmt protein_coding retained_intron MGP_NODShiLtJ_T0025865.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88256423 88258465 - Polrmt protein_coding retained_intron MGP_NODShiLtJ_T0025866.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88257921 88259209 - Polrmt protein_coding retained_intron MGP_NODShiLtJ_T0025867.1 MGP_NODShiLtJ_G0017317.1 mouse_genomes_project 10 88264774 88267593 - Polrmt protein_coding processed_transcript MGP_NODShiLtJ_T0027234.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144509166 144526299 + MGP_NODShiLtJ_P0027234 Gls2 protein_coding protein_coding MGP_NODShiLtJ_T0027235.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144510134 144515671 + MGP_NODShiLtJ_P0027235 Gls2 protein_coding protein_coding MGP_NODShiLtJ_T0027236.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144510216 144526294 + MGP_NODShiLtJ_P0027236 Gls2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027237.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144510219 144516048 + Gls2 protein_coding processed_transcript MGP_NODShiLtJ_T0027238.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144510223 144526364 + MGP_NODShiLtJ_P0027238 Gls2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027239.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144510245 144526294 + MGP_NODShiLtJ_P0027239 Gls2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027240.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144510303 144516206 + Gls2 protein_coding retained_intron MGP_NODShiLtJ_T0027241.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144519615 144520551 + Gls2 protein_coding retained_intron MGP_NODShiLtJ_T0027242.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144520042 144523363 + Gls2 protein_coding processed_transcript MGP_NODShiLtJ_T0027243.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144520123 144526302 + Gls2 protein_coding retained_intron MGP_NODShiLtJ_T0027244.1 MGP_NODShiLtJ_G0017711.1 mouse_genomes_project 10 144523284 144526090 + MGP_NODShiLtJ_P0027244 Gls2 protein_coding protein_coding MGP_NODShiLtJ_T0027057.1 MGP_NODShiLtJ_G0017652.1 mouse_genomes_project 10 138430340 138522341 - MGP_NODShiLtJ_P0027057 Mon2 protein_coding protein_coding MGP_NODShiLtJ_T0027058.1 MGP_NODShiLtJ_G0017652.1 mouse_genomes_project 10 138430340 138522341 - MGP_NODShiLtJ_P0027058 Mon2 protein_coding protein_coding MGP_NODShiLtJ_T0027059.1 MGP_NODShiLtJ_G0017652.1 mouse_genomes_project 10 138430340 138522341 - MGP_NODShiLtJ_P0027059 Mon2 protein_coding protein_coding MGP_NODShiLtJ_T0002994.1 MGP_NODShiLtJ_G0002795.1 mouse_genomes_project 10 69622877 69623963 - 1700120B22Rik antisense antisense MGP_NODShiLtJ_T0024595.1 MGP_NODShiLtJ_G0016948.1 mouse_genomes_project 10 23729866 23732397 + MGP_NODShiLtJ_P0024595 protein_coding protein_coding MGP_NODShiLtJ_T0088488.1 MGP_NODShiLtJ_G0033420.1 mouse_genomes_project 8 60043139 60240574 + MGP_NODShiLtJ_P0088488 Gpm6a protein_coding protein_coding MGP_NODShiLtJ_T0087933.1 MGP_NODShiLtJ_G0033234.1 mouse_genomes_project 8 20782210 20783341 - MGP_NODShiLtJ_P0087933 protein_coding protein_coding MGP_NODShiLtJ_T0015874.1 MGP_NODShiLtJ_G0013982.1 mouse_genomes_project 8 90575215 90575803 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089761.1 MGP_NODShiLtJ_G0033821.1 mouse_genomes_project 8 117666975 117677183 + MGP_NODShiLtJ_P0089761 Ces2a protein_coding protein_coding MGP_NODShiLtJ_T0089762.1 MGP_NODShiLtJ_G0033821.1 mouse_genomes_project 8 117666990 117677187 + MGP_NODShiLtJ_P0089762 Ces2a protein_coding protein_coding MGP_NODShiLtJ_T0089763.1 MGP_NODShiLtJ_G0033821.1 mouse_genomes_project 8 117667000 117673489 + Ces2a protein_coding processed_transcript MGP_NODShiLtJ_T0089764.1 MGP_NODShiLtJ_G0033821.1 mouse_genomes_project 8 117667648 117676969 + MGP_NODShiLtJ_P0089764 Ces2a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089765.1 MGP_NODShiLtJ_G0033821.1 mouse_genomes_project 8 117675571 117676797 + Ces2a protein_coding retained_intron MGP_NODShiLtJ_T0089021.1 MGP_NODShiLtJ_G0033581.1 mouse_genomes_project 8 80587720 80611916 + MGP_NODShiLtJ_P0089021 Rab8a protein_coding protein_coding MGP_NODShiLtJ_T0089022.1 MGP_NODShiLtJ_G0033581.1 mouse_genomes_project 8 80587833 80603875 + Rab8a protein_coding processed_transcript MGP_NODShiLtJ_T0089023.1 MGP_NODShiLtJ_G0033581.1 mouse_genomes_project 8 80587879 80604069 + Rab8a protein_coding retained_intron MGP_NODShiLtJ_T0097840.1 MGP_NODShiLtJ_G0036252.1 mouse_genomes_project 8 116564632 116574451 - pseudogene pseudogene MGP_NODShiLtJ_T0089595.1 MGP_NODShiLtJ_G0033759.1 mouse_genomes_project 8 104629018 104630583 + MGP_NODShiLtJ_P0089595 Mt3 protein_coding protein_coding MGP_NODShiLtJ_T0010845.1 MGP_NODShiLtJ_G0008978.1 mouse_genomes_project 8 12357976 12358070 + miRNA miRNA MGP_NODShiLtJ_T0099538.1 MGP_NODShiLtJ_G0037932.1 mouse_genomes_project 8 27532013 27532116 - Gm24202 snRNA snRNA MGP_NODShiLtJ_T0018321.1 MGP_NODShiLtJ_G0015587.1 mouse_genomes_project 8 97366199 97372070 - Gm27208 processed_transcript lincRNA MGP_NODShiLtJ_T0018322.1 MGP_NODShiLtJ_G0015587.1 mouse_genomes_project 8 97371587 97372692 - Gm27208 processed_transcript TEC MGP_NODShiLtJ_T0002283.1 MGP_NODShiLtJ_G0002194.1 mouse_genomes_project 8 84389963 84390370 - TEC TEC MGP_NODShiLtJ_T0089400.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94905790 94911405 - Wdr83 protein_coding retained_intron MGP_NODShiLtJ_T0089401.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94905790 94911334 - Wdr83 protein_coding retained_intron MGP_NODShiLtJ_T0089402.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94905790 94911448 - MGP_NODShiLtJ_P0089402 Wdr83 protein_coding protein_coding MGP_NODShiLtJ_T0089403.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94905791 94910617 - Wdr83 protein_coding retained_intron MGP_NODShiLtJ_T0089404.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94905792 94906863 - MGP_NODShiLtJ_P0089404 Wdr83 protein_coding protein_coding MGP_NODShiLtJ_T0089405.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94905793 94907047 - Wdr83 protein_coding retained_intron MGP_NODShiLtJ_T0089406.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94905807 94912005 - Wdr83 protein_coding retained_intron MGP_NODShiLtJ_T0089407.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94906583 94911375 - MGP_NODShiLtJ_P0089407 Wdr83 protein_coding protein_coding MGP_NODShiLtJ_T0089408.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94906879 94911376 - MGP_NODShiLtJ_P0089408 Wdr83 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089409.1 MGP_NODShiLtJ_G0033698.1 mouse_genomes_project 8 94910396 94911371 - Wdr83 protein_coding retained_intron MGP_NODShiLtJ_T0018310.1 MGP_NODShiLtJ_G0015582.1 mouse_genomes_project 8 80574059 80587376 - Gm16091 processed_transcript processed_transcript MGP_NODShiLtJ_T0090169.1 MGP_NODShiLtJ_G0033969.1 mouse_genomes_project 8 131162336 131168250 - Cmc2 protein_coding retained_intron MGP_NODShiLtJ_T0090170.1 MGP_NODShiLtJ_G0033969.1 mouse_genomes_project 8 131162336 131194184 - MGP_NODShiLtJ_P0090170 Cmc2 protein_coding protein_coding MGP_NODShiLtJ_T0090171.1 MGP_NODShiLtJ_G0033969.1 mouse_genomes_project 8 131162930 131194151 - MGP_NODShiLtJ_P0090171 Cmc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090172.1 MGP_NODShiLtJ_G0033969.1 mouse_genomes_project 8 131163184 131194168 - MGP_NODShiLtJ_P0090172 Cmc2 protein_coding protein_coding MGP_NODShiLtJ_T0090173.1 MGP_NODShiLtJ_G0033969.1 mouse_genomes_project 8 131163266 131194175 - Cmc2 protein_coding processed_transcript MGP_NODShiLtJ_T0090174.1 MGP_NODShiLtJ_G0033969.1 mouse_genomes_project 8 131163283 131194094 - MGP_NODShiLtJ_P0090174 Cmc2 protein_coding protein_coding MGP_NODShiLtJ_T0088096.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25175613 25184512 + MGP_NODShiLtJ_P0088096 Plpp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088097.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25175613 25184512 + MGP_NODShiLtJ_P0088097 Plpp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088098.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25175616 25184512 + Plpp5 protein_coding retained_intron MGP_NODShiLtJ_T0088099.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25175616 25184512 + MGP_NODShiLtJ_P0088099 Plpp5 protein_coding protein_coding MGP_NODShiLtJ_T0088100.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25175616 25184512 + MGP_NODShiLtJ_P0088100 Plpp5 protein_coding protein_coding MGP_NODShiLtJ_T0088101.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25175652 25177704 + Plpp5 protein_coding retained_intron MGP_NODShiLtJ_T0088102.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25175934 25184508 + Plpp5 protein_coding retained_intron MGP_NODShiLtJ_T0088103.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25176008 25184512 + Plpp5 protein_coding processed_transcript MGP_NODShiLtJ_T0088104.1 MGP_NODShiLtJ_G0033291.1 mouse_genomes_project 8 25178510 25184073 + Plpp5 protein_coding retained_intron MGP_NODShiLtJ_T0009051.1 MGP_NODShiLtJ_G0007275.1 mouse_genomes_project 8 97180951 97275848 + Gm27169 lincRNA lincRNA MGP_NODShiLtJ_T0090607.1 MGP_NODShiLtJ_G0034099.1 mouse_genomes_project 8 141665739 141674202 - MGP_NODShiLtJ_P0090607 Irf2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0005294.1 MGP_NODShiLtJ_G0004481.1 mouse_genomes_project 8 42871213 42882884 + Gm16193 antisense antisense MGP_NODShiLtJ_T0088858.1 MGP_NODShiLtJ_G0033531.1 mouse_genomes_project 8 79042243 79052351 - MGP_NODShiLtJ_P0088858 Pik3r2 protein_coding protein_coding MGP_NODShiLtJ_T0088859.1 MGP_NODShiLtJ_G0033531.1 mouse_genomes_project 8 79042528 79043456 - MGP_NODShiLtJ_P0088859 Pik3r2 protein_coding protein_coding MGP_NODShiLtJ_T0088860.1 MGP_NODShiLtJ_G0033531.1 mouse_genomes_project 8 79042707 79043732 - Pik3r2 protein_coding retained_intron MGP_NODShiLtJ_T0088861.1 MGP_NODShiLtJ_G0033531.1 mouse_genomes_project 8 79046068 79048802 - Pik3r2 protein_coding retained_intron MGP_NODShiLtJ_T0088862.1 MGP_NODShiLtJ_G0033531.1 mouse_genomes_project 8 79046448 79050325 - MGP_NODShiLtJ_P0088862 Pik3r2 protein_coding protein_coding MGP_NODShiLtJ_T0088863.1 MGP_NODShiLtJ_G0033531.1 mouse_genomes_project 8 79050646 79052317 - Pik3r2 protein_coding processed_transcript MGP_NODShiLtJ_T0090441.1 MGP_NODShiLtJ_G0034045.1 mouse_genomes_project 8 137866482 137869966 + MGP_NODShiLtJ_P0090441 Rpl13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090442.1 MGP_NODShiLtJ_G0034045.1 mouse_genomes_project 8 137867066 137869961 + MGP_NODShiLtJ_P0090442 Rpl13 protein_coding protein_coding MGP_NODShiLtJ_T0090443.1 MGP_NODShiLtJ_G0034045.1 mouse_genomes_project 8 137867367 137868358 + Rpl13 protein_coding retained_intron MGP_NODShiLtJ_T0090444.1 MGP_NODShiLtJ_G0034045.1 mouse_genomes_project 8 137867369 137869181 + Rpl13 protein_coding retained_intron MGP_NODShiLtJ_T0090445.1 MGP_NODShiLtJ_G0034045.1 mouse_genomes_project 8 137867369 137869961 + Rpl13 protein_coding retained_intron MGP_NODShiLtJ_T0018282.1 MGP_NODShiLtJ_G0015571.1 mouse_genomes_project 8 5831927 5833993 + Gm28262 processed_transcript lincRNA MGP_NODShiLtJ_T0018283.1 MGP_NODShiLtJ_G0015571.1 mouse_genomes_project 8 5833956 5839384 + Gm28262 processed_transcript TEC MGP_NODShiLtJ_T0090587.1 MGP_NODShiLtJ_G0034091.1 mouse_genomes_project 8 140688646 140692188 + MGP_NODShiLtJ_P0090587 Map10 protein_coding protein_coding MGP_NODShiLtJ_T0089686.1 MGP_NODShiLtJ_G0033791.1 mouse_genomes_project 8 105996074 106039141 - MGP_NODShiLtJ_P0089686 Csnk2a2 protein_coding protein_coding MGP_NODShiLtJ_T0009103.1 MGP_NODShiLtJ_G0007307.1 mouse_genomes_project 8 135207803 135208529 + Gm26739 lincRNA lincRNA MGP_NODShiLtJ_T0087688.1 MGP_NODShiLtJ_G0033141.1 mouse_genomes_project 8 1772881 1773708 - MGP_NODShiLtJ_P0087688 protein_coding protein_coding MGP_NODShiLtJ_T0089737.1 MGP_NODShiLtJ_G0033813.1 mouse_genomes_project 8 117303986 117333075 - MGP_NODShiLtJ_P0089737 Dync1li2 protein_coding protein_coding MGP_NODShiLtJ_T0087833.1 MGP_NODShiLtJ_G0033189.1 mouse_genomes_project 8 12210318 12234455 + MGP_NODShiLtJ_P0087833 Cdc16 protein_coding protein_coding MGP_NODShiLtJ_T0087834.1 MGP_NODShiLtJ_G0033189.1 mouse_genomes_project 8 12210319 12215650 + Cdc16 protein_coding processed_transcript MGP_NODShiLtJ_T0087835.1 MGP_NODShiLtJ_G0033189.1 mouse_genomes_project 8 12210357 12219087 + Cdc16 protein_coding processed_transcript MGP_NODShiLtJ_T0087836.1 MGP_NODShiLtJ_G0033189.1 mouse_genomes_project 8 12211409 12215653 + Cdc16 protein_coding retained_intron MGP_NODShiLtJ_T0087837.1 MGP_NODShiLtJ_G0033189.1 mouse_genomes_project 8 12231476 12234455 + Cdc16 protein_coding retained_intron MGP_NODShiLtJ_T0005346.1 MGP_NODShiLtJ_G0004526.1 mouse_genomes_project 8 137428803 137431104 + Gm10612 antisense antisense MGP_NODShiLtJ_T0087699.1 MGP_NODShiLtJ_G0033150.1 mouse_genomes_project 8 8089848 8104297 + MGP_NODShiLtJ_P0087699 Abhd13 protein_coding protein_coding MGP_NODShiLtJ_T0087700.1 MGP_NODShiLtJ_G0033150.1 mouse_genomes_project 8 8089858 8104297 + MGP_NODShiLtJ_P0087700 Abhd13 protein_coding protein_coding MGP_NODShiLtJ_T0089311.1 MGP_NODShiLtJ_G0033677.1 mouse_genomes_project 8 94636571 94640614 - MGP_NODShiLtJ_P0089311 Rad23a protein_coding protein_coding MGP_NODShiLtJ_T0089312.1 MGP_NODShiLtJ_G0033677.1 mouse_genomes_project 8 94637204 94643209 - MGP_NODShiLtJ_P0089312 Rad23a protein_coding protein_coding MGP_NODShiLtJ_T0089313.1 MGP_NODShiLtJ_G0033677.1 mouse_genomes_project 8 94637464 94643233 - MGP_NODShiLtJ_P0089313 Rad23a protein_coding protein_coding MGP_NODShiLtJ_T0089314.1 MGP_NODShiLtJ_G0033677.1 mouse_genomes_project 8 94638186 94643233 - MGP_NODShiLtJ_P0089314 Rad23a protein_coding protein_coding MGP_NODShiLtJ_T0089315.1 MGP_NODShiLtJ_G0033677.1 mouse_genomes_project 8 94640288 94641233 - Rad23a protein_coding retained_intron MGP_NODShiLtJ_T0089316.1 MGP_NODShiLtJ_G0033677.1 mouse_genomes_project 8 94640301 94641247 - Rad23a protein_coding retained_intron MGP_NODShiLtJ_T0089317.1 MGP_NODShiLtJ_G0033677.1 mouse_genomes_project 8 94640865 94643204 - Rad23a protein_coding retained_intron MGP_NODShiLtJ_T0090044.1 MGP_NODShiLtJ_G0033931.1 mouse_genomes_project 8 124393215 124429509 - MGP_NODShiLtJ_P0090044 Sf3b3 protein_coding protein_coding MGP_NODShiLtJ_T0089119.1 MGP_NODShiLtJ_G0033617.1 mouse_genomes_project 8 88568880 88635075 - MGP_NODShiLtJ_P0089119 Smad1 protein_coding protein_coding MGP_NODShiLtJ_T0089120.1 MGP_NODShiLtJ_G0033617.1 mouse_genomes_project 8 88572063 88635075 - MGP_NODShiLtJ_P0089120 Smad1 protein_coding protein_coding MGP_NODShiLtJ_T0089121.1 MGP_NODShiLtJ_G0033617.1 mouse_genomes_project 8 88586010 88635075 - MGP_NODShiLtJ_P0089121 Smad1 protein_coding protein_coding MGP_NODShiLtJ_T0089753.1 MGP_NODShiLtJ_G0033816.1 mouse_genomes_project 8 117433979 117443478 + MGP_NODShiLtJ_P0089753 Car7 protein_coding protein_coding MGP_NODShiLtJ_T0089754.1 MGP_NODShiLtJ_G0033816.1 mouse_genomes_project 8 117441010 117442194 + Car7 protein_coding retained_intron MGP_NODShiLtJ_T0002288.1 MGP_NODShiLtJ_G0002198.1 mouse_genomes_project 8 118690922 118691925 + TEC TEC MGP_NODShiLtJ_T0089691.1 MGP_NODShiLtJ_G0033795.1 mouse_genomes_project 8 106256011 106288551 + MGP_NODShiLtJ_P0089691 Ndrg4 protein_coding protein_coding MGP_NODShiLtJ_T0089692.1 MGP_NODShiLtJ_G0033795.1 mouse_genomes_project 8 106257099 106294203 + MGP_NODShiLtJ_P0089692 Ndrg4 protein_coding protein_coding MGP_NODShiLtJ_T0089693.1 MGP_NODShiLtJ_G0033795.1 mouse_genomes_project 8 106257256 106294199 + MGP_NODShiLtJ_P0089693 Ndrg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089694.1 MGP_NODShiLtJ_G0033795.1 mouse_genomes_project 8 106257358 106294212 + MGP_NODShiLtJ_P0089694 Ndrg4 protein_coding protein_coding MGP_NODShiLtJ_T0089695.1 MGP_NODShiLtJ_G0033795.1 mouse_genomes_project 8 106285969 106290391 + Ndrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0089696.1 MGP_NODShiLtJ_G0033795.1 mouse_genomes_project 8 106288516 106290889 + Ndrg4 protein_coding retained_intron MGP_NODShiLtJ_T0089697.1 MGP_NODShiLtJ_G0033795.1 mouse_genomes_project 8 106289313 106293165 + Ndrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0089698.1 MGP_NODShiLtJ_G0033795.1 mouse_genomes_project 8 106291143 106292462 + Ndrg4 protein_coding retained_intron MGP_NODShiLtJ_T0002289.1 MGP_NODShiLtJ_G0002199.1 mouse_genomes_project 8 120323349 120324132 + TEC TEC MGP_NODShiLtJ_T0088409.1 MGP_NODShiLtJ_G0033395.1 mouse_genomes_project 8 49375165 49403064 + MGP_NODShiLtJ_P0088409 Cenpu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088410.1 MGP_NODShiLtJ_G0033395.1 mouse_genomes_project 8 49375170 49402641 + MGP_NODShiLtJ_P0088410 Cenpu protein_coding protein_coding MGP_NODShiLtJ_T0088411.1 MGP_NODShiLtJ_G0033395.1 mouse_genomes_project 8 49375171 49379347 + Cenpu protein_coding retained_intron MGP_NODShiLtJ_T0088412.1 MGP_NODShiLtJ_G0033395.1 mouse_genomes_project 8 49375197 49401425 + MGP_NODShiLtJ_P0088412 Cenpu protein_coding protein_coding MGP_NODShiLtJ_T0088413.1 MGP_NODShiLtJ_G0033395.1 mouse_genomes_project 8 49383187 49385550 + Cenpu protein_coding processed_transcript MGP_NODShiLtJ_T0088414.1 MGP_NODShiLtJ_G0033395.1 mouse_genomes_project 8 49384820 49395887 + Cenpu protein_coding retained_intron MGP_NODShiLtJ_T0088415.1 MGP_NODShiLtJ_G0033395.1 mouse_genomes_project 8 49396229 49401435 + Cenpu protein_coding retained_intron MGP_NODShiLtJ_T0010915.1 MGP_NODShiLtJ_G0009048.1 mouse_genomes_project 8 135145399 135145458 + Mir7687 miRNA miRNA MGP_NODShiLtJ_T0010854.1 MGP_NODShiLtJ_G0008987.1 mouse_genomes_project 8 36524146 36524273 - Gm44474 miRNA miRNA MGP_NODShiLtJ_T0015854.1 MGP_NODShiLtJ_G0013962.1 mouse_genomes_project 8 44087736 44089386 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100824.1 MGP_NODShiLtJ_G0039218.1 mouse_genomes_project 8 76004506 76004637 + Gm22018 snoRNA snoRNA MGP_NODShiLtJ_T0088950.1 MGP_NODShiLtJ_G0033563.1 mouse_genomes_project 8 79896223 79900792 - MGP_NODShiLtJ_P0088950 Tmem221 protein_coding protein_coding MGP_NODShiLtJ_T0088866.1 MGP_NODShiLtJ_G0033534.1 mouse_genomes_project 8 79114484 79119050 - MGP_NODShiLtJ_P0088866 Arrdc2 protein_coding protein_coding MGP_NODShiLtJ_T0015820.1 MGP_NODShiLtJ_G0013928.1 mouse_genomes_project 8 1113074 1116521 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090352.1 MGP_NODShiLtJ_G0034022.1 mouse_genomes_project 8 136599718 136632187 - MGP_NODShiLtJ_P0090352 Car5a protein_coding protein_coding MGP_NODShiLtJ_T0090353.1 MGP_NODShiLtJ_G0034022.1 mouse_genomes_project 8 136603238 136612673 - Car5a protein_coding processed_transcript MGP_NODShiLtJ_T0088145.1 MGP_NODShiLtJ_G0033311.1 mouse_genomes_project 8 26851203 26856318 - MGP_NODShiLtJ_P0088145 Got1l1 protein_coding protein_coding MGP_NODShiLtJ_T0089994.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123079091 123094187 - MGP_NODShiLtJ_P0089994 Dhodh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089995.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123080995 123081800 - Dhodh protein_coding processed_transcript MGP_NODShiLtJ_T0089996.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123081221 123096327 - MGP_NODShiLtJ_P0089996 Dhodh protein_coding protein_coding MGP_NODShiLtJ_T0089997.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123081225 123096578 - MGP_NODShiLtJ_P0089997 Dhodh protein_coding protein_coding MGP_NODShiLtJ_T0089998.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123081649 123084031 - Dhodh protein_coding retained_intron MGP_NODShiLtJ_T0089999.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123081721 123082699 - Dhodh protein_coding retained_intron MGP_NODShiLtJ_T0090000.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123081794 123089219 - Dhodh protein_coding retained_intron MGP_NODShiLtJ_T0090001.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123083778 123096321 - MGP_NODShiLtJ_P0090001 Dhodh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090002.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123089023 123096375 - Dhodh protein_coding retained_intron MGP_NODShiLtJ_T0090003.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123089038 123096375 - Dhodh protein_coding retained_intron MGP_NODShiLtJ_T0090004.1 MGP_NODShiLtJ_G0033912.1 mouse_genomes_project 8 123091010 123096628 - MGP_NODShiLtJ_P0090004 Dhodh protein_coding protein_coding MGP_NODShiLtJ_T0088637.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76867780 76911127 + MGP_NODShiLtJ_P0088637 Ints10 protein_coding protein_coding MGP_NODShiLtJ_T0088638.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76867786 76904260 + MGP_NODShiLtJ_P0088638 Ints10 protein_coding protein_coding MGP_NODShiLtJ_T0088639.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76867807 76876376 + Ints10 protein_coding retained_intron MGP_NODShiLtJ_T0088640.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76867807 76911125 + MGP_NODShiLtJ_P0088640 Ints10 protein_coding protein_coding MGP_NODShiLtJ_T0088641.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76867825 76876376 + Ints10 protein_coding retained_intron MGP_NODShiLtJ_T0088642.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76867866 76911125 + MGP_NODShiLtJ_P0088642 Ints10 protein_coding protein_coding MGP_NODShiLtJ_T0088643.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76867872 76904003 + MGP_NODShiLtJ_P0088643 Ints10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088644.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76893932 76896582 + Ints10 protein_coding retained_intron MGP_NODShiLtJ_T0088645.1 MGP_NODShiLtJ_G0033467.1 mouse_genomes_project 8 76902634 76909233 + MGP_NODShiLtJ_P0088645 Ints10 protein_coding protein_coding MGP_NODShiLtJ_T0087624.1 MGP_NODShiLtJ_G0033128.1 mouse_genomes_project 8 954058 959887 - MGP_NODShiLtJ_P0087624 Cd209c protein_coding protein_coding MGP_NODShiLtJ_T0087625.1 MGP_NODShiLtJ_G0033128.1 mouse_genomes_project 8 954130 962057 - MGP_NODShiLtJ_P0087625 Cd209c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088733.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78389289 78398264 + Tmem161a protein_coding processed_transcript MGP_NODShiLtJ_T0088734.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78389338 78401001 + MGP_NODShiLtJ_P0088734 Tmem161a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088735.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78389346 78400209 + MGP_NODShiLtJ_P0088735 Tmem161a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088736.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78389349 78394570 + Tmem161a protein_coding retained_intron MGP_NODShiLtJ_T0088737.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78389349 78394843 + Tmem161a protein_coding processed_transcript MGP_NODShiLtJ_T0088738.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78389352 78398072 + MGP_NODShiLtJ_P0088738 Tmem161a protein_coding protein_coding MGP_NODShiLtJ_T0088739.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78389371 78399473 + MGP_NODShiLtJ_P0088739 Tmem161a protein_coding protein_coding MGP_NODShiLtJ_T0088740.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78391230 78400201 + MGP_NODShiLtJ_P0088740 Tmem161a protein_coding protein_coding MGP_NODShiLtJ_T0088741.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78394259 78394976 + Tmem161a protein_coding retained_intron MGP_NODShiLtJ_T0088742.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78394654 78396224 + Tmem161a protein_coding processed_transcript MGP_NODShiLtJ_T0088743.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78394904 78398546 + MGP_NODShiLtJ_P0088743 Tmem161a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088744.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78396066 78398647 + Tmem161a protein_coding retained_intron MGP_NODShiLtJ_T0088745.1 MGP_NODShiLtJ_G0033499.1 mouse_genomes_project 8 78397872 78399366 + Tmem161a protein_coding retained_intron MGP_NODShiLtJ_T0018311.1 MGP_NODShiLtJ_G0015583.1 mouse_genomes_project 8 85599565 85932984 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018312.1 MGP_NODShiLtJ_G0015583.1 mouse_genomes_project 8 85771541 85933172 - processed_transcript processed_transcript MGP_NODShiLtJ_T0018313.1 MGP_NODShiLtJ_G0015583.1 mouse_genomes_project 8 85869307 85933620 - processed_transcript retained_intron MGP_NODShiLtJ_T0099565.1 MGP_NODShiLtJ_G0037959.1 mouse_genomes_project 8 115023499 115023562 + Gm24602 snRNA snRNA MGP_NODShiLtJ_T0090458.1 MGP_NODShiLtJ_G0034049.1 mouse_genomes_project 8 137995358 138003664 - MGP_NODShiLtJ_P0090458 Chmp1a protein_coding protein_coding MGP_NODShiLtJ_T0090459.1 MGP_NODShiLtJ_G0034049.1 mouse_genomes_project 8 137996699 138000673 - Chmp1a protein_coding retained_intron MGP_NODShiLtJ_T0090460.1 MGP_NODShiLtJ_G0034049.1 mouse_genomes_project 8 138000490 138003667 - Chmp1a protein_coding retained_intron MGP_NODShiLtJ_T0009046.1 MGP_NODShiLtJ_G0007271.1 mouse_genomes_project 8 96883512 96884183 - Gm27168 lincRNA lincRNA MGP_NODShiLtJ_T0088907.1 MGP_NODShiLtJ_G0033550.1 mouse_genomes_project 8 79699945 79703065 + MGP_NODShiLtJ_P0088907 Ocel1 protein_coding protein_coding MGP_NODShiLtJ_T0088908.1 MGP_NODShiLtJ_G0033550.1 mouse_genomes_project 8 79699986 79702372 + MGP_NODShiLtJ_P0088908 Ocel1 protein_coding protein_coding MGP_NODShiLtJ_T0088909.1 MGP_NODShiLtJ_G0033550.1 mouse_genomes_project 8 79699993 79708044 + MGP_NODShiLtJ_P0088909 Ocel1 protein_coding protein_coding MGP_NODShiLtJ_T0088910.1 MGP_NODShiLtJ_G0033550.1 mouse_genomes_project 8 79701155 79701638 + Ocel1 protein_coding retained_intron MGP_NODShiLtJ_T0088847.1 MGP_NODShiLtJ_G0033526.1 mouse_genomes_project 8 78989731 78993823 + MGP_NODShiLtJ_P0088847 Gm3336 protein_coding protein_coding MGP_NODShiLtJ_T0015846.1 MGP_NODShiLtJ_G0013954.1 mouse_genomes_project 8 34918386 34921265 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099575.1 MGP_NODShiLtJ_G0037969.1 mouse_genomes_project 8 132860563 132860670 - Gm24035 snRNA snRNA MGP_NODShiLtJ_T0089734.1 MGP_NODShiLtJ_G0033810.1 mouse_genomes_project 8 117194176 117204502 + MGP_NODShiLtJ_P0089734 Cmtm2b protein_coding protein_coding MGP_NODShiLtJ_T0088668.1 MGP_NODShiLtJ_G0033473.1 mouse_genomes_project 8 77462753 77467291 + MGP_NODShiLtJ_P0088668 D130040H23Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088669.1 MGP_NODShiLtJ_G0033473.1 mouse_genomes_project 8 77464986 77467373 + MGP_NODShiLtJ_P0088669 D130040H23Rik protein_coding protein_coding MGP_NODShiLtJ_T0090522.1 MGP_NODShiLtJ_G0034066.1 mouse_genomes_project 8 138709590 138730085 - MGP_NODShiLtJ_P0090522 Ccsap protein_coding protein_coding MGP_NODShiLtJ_T0090523.1 MGP_NODShiLtJ_G0034066.1 mouse_genomes_project 8 138709603 138730764 - MGP_NODShiLtJ_P0090523 Ccsap protein_coding protein_coding MGP_NODShiLtJ_T0089901.1 MGP_NODShiLtJ_G0033878.1 mouse_genomes_project 8 119160711 119253685 + MGP_NODShiLtJ_P0089901 Nfatc3 protein_coding protein_coding MGP_NODShiLtJ_T0089902.1 MGP_NODShiLtJ_G0033878.1 mouse_genomes_project 8 119160999 119242586 + MGP_NODShiLtJ_P0089902 Nfatc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089230.1 MGP_NODShiLtJ_G0033655.1 mouse_genomes_project 8 93784125 93786197 - MGP_NODShiLtJ_P0089230 Rln3 protein_coding protein_coding MGP_NODShiLtJ_T0087640.1 MGP_NODShiLtJ_G0033130.1 mouse_genomes_project 8 1241600 1248739 - MGP_NODShiLtJ_P0087640 Prr36 protein_coding protein_coding MGP_NODShiLtJ_T0087641.1 MGP_NODShiLtJ_G0033130.1 mouse_genomes_project 8 1246475 1248339 - MGP_NODShiLtJ_P0087641 Prr36 protein_coding protein_coding MGP_NODShiLtJ_T0087642.1 MGP_NODShiLtJ_G0033130.1 mouse_genomes_project 8 1247398 1248579 - MGP_NODShiLtJ_P0087642 Prr36 protein_coding protein_coding MGP_NODShiLtJ_T0087643.1 MGP_NODShiLtJ_G0033130.1 mouse_genomes_project 8 1247834 1248886 - MGP_NODShiLtJ_P0087643 Prr36 protein_coding protein_coding MGP_NODShiLtJ_T0088423.1 MGP_NODShiLtJ_G0033399.1 mouse_genomes_project 8 49843737 49889090 + Enpp6 protein_coding retained_intron MGP_NODShiLtJ_T0088424.1 MGP_NODShiLtJ_G0033399.1 mouse_genomes_project 8 49843739 49954788 + Enpp6 protein_coding retained_intron MGP_NODShiLtJ_T0088425.1 MGP_NODShiLtJ_G0033399.1 mouse_genomes_project 8 49843739 49954788 + MGP_NODShiLtJ_P0088425 Enpp6 protein_coding protein_coding MGP_NODShiLtJ_T0088426.1 MGP_NODShiLtJ_G0033399.1 mouse_genomes_project 8 49843766 49948313 + MGP_NODShiLtJ_P0088426 Enpp6 protein_coding protein_coding MGP_NODShiLtJ_T0088427.1 MGP_NODShiLtJ_G0033399.1 mouse_genomes_project 8 49932929 49948995 + MGP_NODShiLtJ_P0088427 Enpp6 protein_coding protein_coding MGP_NODShiLtJ_T0015845.1 MGP_NODShiLtJ_G0013953.1 mouse_genomes_project 8 34902344 34902731 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100791.1 MGP_NODShiLtJ_G0039185.1 mouse_genomes_project 8 12357982 12358112 + Gm24698 snoRNA snoRNA MGP_NODShiLtJ_T0009064.1 MGP_NODShiLtJ_G0007282.1 mouse_genomes_project 8 98079285 98154819 - lincRNA lincRNA MGP_NODShiLtJ_T0089170.1 MGP_NODShiLtJ_G0033637.1 mouse_genomes_project 8 93237100 93238196 + MGP_NODShiLtJ_P0089170 Olfr370 protein_coding protein_coding MGP_NODShiLtJ_T0088468.1 MGP_NODShiLtJ_G0033414.1 mouse_genomes_project 8 58276418 58333348 - MGP_NODShiLtJ_P0088468 Neil3 protein_coding protein_coding MGP_NODShiLtJ_T0088469.1 MGP_NODShiLtJ_G0033414.1 mouse_genomes_project 8 58295688 58305806 - Neil3 protein_coding processed_transcript MGP_NODShiLtJ_T0088470.1 MGP_NODShiLtJ_G0033414.1 mouse_genomes_project 8 58295688 58305860 - MGP_NODShiLtJ_P0088470 Neil3 protein_coding protein_coding MGP_NODShiLtJ_T0088471.1 MGP_NODShiLtJ_G0033414.1 mouse_genomes_project 8 58295714 58306941 - MGP_NODShiLtJ_P0088471 Neil3 protein_coding protein_coding MGP_NODShiLtJ_T0088472.1 MGP_NODShiLtJ_G0033414.1 mouse_genomes_project 8 58299185 58333249 - Neil3 protein_coding retained_intron MGP_NODShiLtJ_T0088473.1 MGP_NODShiLtJ_G0033414.1 mouse_genomes_project 8 58303884 58332961 - MGP_NODShiLtJ_P0088473 Neil3 protein_coding protein_coding MGP_NODShiLtJ_T0009026.1 MGP_NODShiLtJ_G0007254.1 mouse_genomes_project 8 76101713 76126691 - lincRNA lincRNA MGP_NODShiLtJ_T0009027.1 MGP_NODShiLtJ_G0007254.1 mouse_genomes_project 8 76125728 76126905 - lincRNA lincRNA MGP_NODShiLtJ_T0088226.1 MGP_NODShiLtJ_G0033346.1 mouse_genomes_project 8 36525954 36581512 + MGP_NODShiLtJ_P0088226 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0009037.1 MGP_NODShiLtJ_G0007263.1 mouse_genomes_project 8 90387755 90416560 + lincRNA lincRNA MGP_NODShiLtJ_T0009032.1 MGP_NODShiLtJ_G0007259.1 mouse_genomes_project 8 80954322 80966886 + Gm17435 lincRNA lincRNA MGP_NODShiLtJ_T0102230.1 MGP_NODShiLtJ_G0040396.1 mouse_genomes_project 8 76692134 76692434 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100821.1 MGP_NODShiLtJ_G0039215.1 mouse_genomes_project 8 73546972 73547107 + Gm26123 snoRNA snoRNA MGP_NODShiLtJ_T0015888.1 MGP_NODShiLtJ_G0013996.1 mouse_genomes_project 8 108435342 108436332 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089176.1 MGP_NODShiLtJ_G0033640.1 mouse_genomes_project 8 93312447 93316211 + MGP_NODShiLtJ_P0089176 Dnajb1 protein_coding protein_coding MGP_NODShiLtJ_T0088332.1 MGP_NODShiLtJ_G0033381.1 mouse_genomes_project 8 47999373 48022756 - MGP_NODShiLtJ_P0088332 Fam149a protein_coding protein_coding MGP_NODShiLtJ_T0088333.1 MGP_NODShiLtJ_G0033381.1 mouse_genomes_project 8 47999381 48047154 - MGP_NODShiLtJ_P0088333 Fam149a protein_coding protein_coding MGP_NODShiLtJ_T0088334.1 MGP_NODShiLtJ_G0033381.1 mouse_genomes_project 8 48002431 48022653 - MGP_NODShiLtJ_P0088334 Fam149a protein_coding protein_coding MGP_NODShiLtJ_T0090234.1 MGP_NODShiLtJ_G0033997.1 mouse_genomes_project 8 134362263 134393911 - MGP_NODShiLtJ_P0090234 Cotl1 protein_coding protein_coding MGP_NODShiLtJ_T0090235.1 MGP_NODShiLtJ_G0033997.1 mouse_genomes_project 8 134362263 134393968 - MGP_NODShiLtJ_P0090235 Cotl1 protein_coding protein_coding MGP_NODShiLtJ_T0011612.1 MGP_NODShiLtJ_G0009745.1 mouse_genomes_project 8 97640846 97641203 + Gm24841 misc_RNA misc_RNA MGP_NODShiLtJ_T0088369.1 MGP_NODShiLtJ_G0033387.1 mouse_genomes_project 8 48720585 48747275 + MGP_NODShiLtJ_P0088369 Ufsp2 protein_coding protein_coding MGP_NODShiLtJ_T0088370.1 MGP_NODShiLtJ_G0033387.1 mouse_genomes_project 8 48720591 48747174 + Ufsp2 protein_coding retained_intron MGP_NODShiLtJ_T0088371.1 MGP_NODShiLtJ_G0033387.1 mouse_genomes_project 8 48720601 48728092 + Ufsp2 protein_coding retained_intron MGP_NODShiLtJ_T0088372.1 MGP_NODShiLtJ_G0033387.1 mouse_genomes_project 8 48720607 48732598 + Ufsp2 protein_coding processed_transcript MGP_NODShiLtJ_T0088373.1 MGP_NODShiLtJ_G0033387.1 mouse_genomes_project 8 48720635 48726718 + Ufsp2 protein_coding processed_transcript MGP_NODShiLtJ_T0088374.1 MGP_NODShiLtJ_G0033387.1 mouse_genomes_project 8 48745444 48747177 + Ufsp2 protein_coding retained_intron MGP_NODShiLtJ_T0089034.1 MGP_NODShiLtJ_G0033587.1 mouse_genomes_project 8 80781092 80869661 - MGP_NODShiLtJ_P0089034 Eps15l1 protein_coding protein_coding MGP_NODShiLtJ_T0100829.1 MGP_NODShiLtJ_G0039223.1 mouse_genomes_project 8 86195362 86195492 - Gm24838 snoRNA snoRNA MGP_NODShiLtJ_T0089018.1 MGP_NODShiLtJ_G0033579.1 mouse_genomes_project 8 80529956 80533396 + MGP_NODShiLtJ_P0089018 Olfr374 protein_coding protein_coding MGP_NODShiLtJ_T0018288.1 MGP_NODShiLtJ_G0015575.1 mouse_genomes_project 8 24977647 24985035 - Gm16159 processed_transcript processed_transcript MGP_NODShiLtJ_T0018289.1 MGP_NODShiLtJ_G0015575.1 mouse_genomes_project 8 24981629 24982512 - Gm16159 processed_transcript processed_transcript MGP_NODShiLtJ_T0005284.1 MGP_NODShiLtJ_G0004474.1 mouse_genomes_project 8 21863967 21873349 + Gm15346 antisense antisense MGP_NODShiLtJ_T0090605.1 MGP_NODShiLtJ_G0034097.1 mouse_genomes_project 8 141483917 141486851 + MGP_NODShiLtJ_P0090605 Coa6 protein_coding protein_coding MGP_NODShiLtJ_T0087888.1 MGP_NODShiLtJ_G0033208.1 mouse_genomes_project 8 14519741 16299945 - MGP_NODShiLtJ_P0087888 Csmd1 protein_coding protein_coding MGP_NODShiLtJ_T0087889.1 MGP_NODShiLtJ_G0033208.1 mouse_genomes_project 8 14519749 14618628 - Csmd1 protein_coding retained_intron MGP_NODShiLtJ_T0087890.1 MGP_NODShiLtJ_G0033208.1 mouse_genomes_project 8 14713954 16299945 - Csmd1 protein_coding processed_transcript MGP_NODShiLtJ_T0087891.1 MGP_NODShiLtJ_G0033208.1 mouse_genomes_project 8 14920988 16299945 - Csmd1 protein_coding retained_intron MGP_NODShiLtJ_T0087892.1 MGP_NODShiLtJ_G0033208.1 mouse_genomes_project 8 14984431 16300250 - Csmd1 protein_coding processed_transcript MGP_NODShiLtJ_T0087893.1 MGP_NODShiLtJ_G0033208.1 mouse_genomes_project 8 15936572 16300049 - Csmd1 protein_coding retained_intron MGP_NODShiLtJ_T0087894.1 MGP_NODShiLtJ_G0033208.1 mouse_genomes_project 8 16117257 16300041 - Csmd1 protein_coding processed_transcript MGP_NODShiLtJ_T0011607.1 MGP_NODShiLtJ_G0009740.1 mouse_genomes_project 8 48876106 48876379 + Gm23030 misc_RNA misc_RNA MGP_NODShiLtJ_T0010868.1 MGP_NODShiLtJ_G0009001.1 mouse_genomes_project 8 81476309 81476389 + Mir28b miRNA miRNA MGP_NODShiLtJ_T0100808.1 MGP_NODShiLtJ_G0039202.1 mouse_genomes_project 8 44705055 44705117 - Gm23531 snoRNA snoRNA MGP_NODShiLtJ_T0089134.1 MGP_NODShiLtJ_G0033624.1 mouse_genomes_project 8 90032484 90081699 - MGP_NODShiLtJ_P0089134 Smarca5 protein_coding protein_coding MGP_NODShiLtJ_T0089135.1 MGP_NODShiLtJ_G0033624.1 mouse_genomes_project 8 90044635 90046929 - Smarca5 protein_coding retained_intron MGP_NODShiLtJ_T0089136.1 MGP_NODShiLtJ_G0033624.1 mouse_genomes_project 8 90044947 90046092 - Smarca5 protein_coding retained_intron MGP_NODShiLtJ_T0089137.1 MGP_NODShiLtJ_G0033624.1 mouse_genomes_project 8 90054960 90056564 - Smarca5 protein_coding retained_intron MGP_NODShiLtJ_T0089138.1 MGP_NODShiLtJ_G0033624.1 mouse_genomes_project 8 90065130 90065941 - Smarca5 protein_coding retained_intron MGP_NODShiLtJ_T0088121.1 MGP_NODShiLtJ_G0033301.1 mouse_genomes_project 8 25492182 25510426 - MGP_NODShiLtJ_P0088121 Fnta protein_coding protein_coding MGP_NODShiLtJ_T0090387.1 MGP_NODShiLtJ_G0034029.1 mouse_genomes_project 8 137138120 137150806 - MGP_NODShiLtJ_P0090387 Mvd protein_coding protein_coding MGP_NODShiLtJ_T0087594.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 612772 628282 + MGP_NODShiLtJ_P0087594 Stxbp2 protein_coding protein_coding MGP_NODShiLtJ_T0087595.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 612969 617316 + Stxbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0087596.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 612970 615742 + Stxbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0087597.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 612970 617461 + Stxbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0087598.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 612974 616553 + Stxbp2 protein_coding retained_intron MGP_NODShiLtJ_T0087599.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 612982 617564 + Stxbp2 protein_coding retained_intron MGP_NODShiLtJ_T0087600.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 612987 627433 + MGP_NODShiLtJ_P0087600 Stxbp2 protein_coding protein_coding MGP_NODShiLtJ_T0087601.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 614732 615884 + Stxbp2 protein_coding retained_intron MGP_NODShiLtJ_T0087602.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 617237 617541 + Stxbp2 protein_coding retained_intron MGP_NODShiLtJ_T0087603.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 618987 625600 + Stxbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0087604.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 622666 627432 + Stxbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0087605.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 625302 626533 + Stxbp2 protein_coding retained_intron MGP_NODShiLtJ_T0087606.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 625359 626618 + Stxbp2 protein_coding retained_intron MGP_NODShiLtJ_T0087607.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 625432 627426 + Stxbp2 protein_coding retained_intron MGP_NODShiLtJ_T0087608.1 MGP_NODShiLtJ_G0033118.1 mouse_genomes_project 8 626207 627433 + Stxbp2 protein_coding retained_intron MGP_NODShiLtJ_T0005300.1 MGP_NODShiLtJ_G0004487.1 mouse_genomes_project 8 62946551 62949798 - Gm28063 antisense antisense MGP_NODShiLtJ_T0005301.1 MGP_NODShiLtJ_G0004487.1 mouse_genomes_project 8 62946569 62949798 - Gm28063 antisense antisense MGP_NODShiLtJ_T0088033.1 MGP_NODShiLtJ_G0033279.1 mouse_genomes_project 8 23963611 24044779 - MGP_NODShiLtJ_P0088033 Adam18 protein_coding protein_coding MGP_NODShiLtJ_T0088034.1 MGP_NODShiLtJ_G0033279.1 mouse_genomes_project 8 23963611 24044779 - MGP_NODShiLtJ_P0088034 Adam18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088035.1 MGP_NODShiLtJ_G0033279.1 mouse_genomes_project 8 23963615 23989701 - Adam18 protein_coding processed_transcript MGP_NODShiLtJ_T0010889.1 MGP_NODShiLtJ_G0009022.1 mouse_genomes_project 8 99129677 99131251 + miRNA miRNA MGP_NODShiLtJ_T0015872.1 MGP_NODShiLtJ_G0013980.1 mouse_genomes_project 8 89414666 89415947 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088170.1 MGP_NODShiLtJ_G0033325.1 mouse_genomes_project 8 32317689 32384560 - MGP_NODShiLtJ_P0088170 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0015849.1 MGP_NODShiLtJ_G0013957.1 mouse_genomes_project 8 37158442 37159487 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088105.1 MGP_NODShiLtJ_G0033292.1 mouse_genomes_project 8 25184948 25216430 - MGP_NODShiLtJ_P0088105 Ddhd2 protein_coding protein_coding MGP_NODShiLtJ_T0088025.1 MGP_NODShiLtJ_G0033275.1 mouse_genomes_project 8 23485198 23496544 + MGP_NODShiLtJ_P0088025 protein_coding protein_coding MGP_NODShiLtJ_T0090156.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128473587 129456761 + MGP_NODShiLtJ_P0090156 Wwox protein_coding protein_coding MGP_NODShiLtJ_T0090157.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128473627 128782471 + MGP_NODShiLtJ_P0090157 Wwox protein_coding protein_coding MGP_NODShiLtJ_T0090158.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128473627 128941596 + MGP_NODShiLtJ_P0090158 Wwox protein_coding protein_coding MGP_NODShiLtJ_T0090159.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128473634 128487739 + Wwox protein_coding processed_transcript MGP_NODShiLtJ_T0090160.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128473634 128510631 + MGP_NODShiLtJ_P0090160 Wwox protein_coding protein_coding MGP_NODShiLtJ_T0090161.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128482142 128552957 + Wwox protein_coding processed_transcript MGP_NODShiLtJ_T0090162.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128652626 128769301 + Wwox protein_coding processed_transcript MGP_NODShiLtJ_T0090163.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128775151 129089951 + Wwox protein_coding processed_transcript MGP_NODShiLtJ_T0090164.1 MGP_NODShiLtJ_G0033965.1 mouse_genomes_project 8 128775151 129456196 + Wwox protein_coding processed_transcript MGP_NODShiLtJ_T0018330.1 MGP_NODShiLtJ_G0015591.1 mouse_genomes_project 8 123447179 123455477 + Gm16349 processed_transcript processed_transcript MGP_NODShiLtJ_T0011595.1 MGP_NODShiLtJ_G0009728.1 mouse_genomes_project 8 596601 596928 + Gm22204 misc_RNA misc_RNA MGP_NODShiLtJ_T0090010.1 MGP_NODShiLtJ_G0033917.1 mouse_genomes_project 8 123284513 123376836 + MGP_NODShiLtJ_P0090010 Ap1g1 protein_coding protein_coding MGP_NODShiLtJ_T0090011.1 MGP_NODShiLtJ_G0033917.1 mouse_genomes_project 8 123284856 123315027 + Ap1g1 protein_coding processed_transcript MGP_NODShiLtJ_T0090012.1 MGP_NODShiLtJ_G0033917.1 mouse_genomes_project 8 123284865 123373990 + MGP_NODShiLtJ_P0090012 Ap1g1 protein_coding protein_coding MGP_NODShiLtJ_T0090013.1 MGP_NODShiLtJ_G0033917.1 mouse_genomes_project 8 123354836 123362310 + Ap1g1 protein_coding retained_intron MGP_NODShiLtJ_T0090014.1 MGP_NODShiLtJ_G0033917.1 mouse_genomes_project 8 123371079 123372922 + Ap1g1 protein_coding retained_intron MGP_NODShiLtJ_T0090015.1 MGP_NODShiLtJ_G0033917.1 mouse_genomes_project 8 123375739 123376835 + MGP_NODShiLtJ_P0090015 Ap1g1 protein_coding protein_coding MGP_NODShiLtJ_T0088401.1 MGP_NODShiLtJ_G0033394.1 mouse_genomes_project 8 49285993 49358332 + MGP_NODShiLtJ_P0088401 Acsl1 protein_coding protein_coding MGP_NODShiLtJ_T0088402.1 MGP_NODShiLtJ_G0033394.1 mouse_genomes_project 8 49286051 49337896 + Acsl1 protein_coding retained_intron MGP_NODShiLtJ_T0088403.1 MGP_NODShiLtJ_G0033394.1 mouse_genomes_project 8 49286129 49332656 + MGP_NODShiLtJ_P0088403 Acsl1 protein_coding protein_coding MGP_NODShiLtJ_T0088404.1 MGP_NODShiLtJ_G0033394.1 mouse_genomes_project 8 49310651 49357862 + MGP_NODShiLtJ_P0088404 Acsl1 protein_coding protein_coding MGP_NODShiLtJ_T0088405.1 MGP_NODShiLtJ_G0033394.1 mouse_genomes_project 8 49310651 49326977 + MGP_NODShiLtJ_P0088405 Acsl1 protein_coding protein_coding MGP_NODShiLtJ_T0088406.1 MGP_NODShiLtJ_G0033394.1 mouse_genomes_project 8 49312509 49356761 + MGP_NODShiLtJ_P0088406 Acsl1 protein_coding protein_coding MGP_NODShiLtJ_T0088407.1 MGP_NODShiLtJ_G0033394.1 mouse_genomes_project 8 49348045 49350929 + Acsl1 protein_coding retained_intron MGP_NODShiLtJ_T0088408.1 MGP_NODShiLtJ_G0033394.1 mouse_genomes_project 8 49353340 49356736 + MGP_NODShiLtJ_P0088408 Acsl1 protein_coding protein_coding MGP_NODShiLtJ_T0087913.1 MGP_NODShiLtJ_G0033216.1 mouse_genomes_project 8 17959472 17971195 - MGP_NODShiLtJ_P0087913 Defb39 protein_coding protein_coding MGP_NODShiLtJ_T0099543.1 MGP_NODShiLtJ_G0037937.1 mouse_genomes_project 8 48598400 48598526 - Gm25309 snRNA snRNA MGP_NODShiLtJ_T0010852.1 MGP_NODShiLtJ_G0008985.1 mouse_genomes_project 8 24547003 24547112 - Mir8108 miRNA miRNA MGP_NODShiLtJ_T0005268.1 MGP_NODShiLtJ_G0004463.1 mouse_genomes_project 8 9637844 9656545 - Gm15419 antisense antisense MGP_NODShiLtJ_T0087669.1 MGP_NODShiLtJ_G0033138.1 mouse_genomes_project 8 1370213 1408661 + MGP_NODShiLtJ_P0087669 Ccl25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087670.1 MGP_NODShiLtJ_G0033138.1 mouse_genomes_project 8 1370230 1397613 + MGP_NODShiLtJ_P0087670 Ccl25 protein_coding non_stop_decay MGP_NODShiLtJ_T0087671.1 MGP_NODShiLtJ_G0033138.1 mouse_genomes_project 8 1370233 1397613 + MGP_NODShiLtJ_P0087671 Ccl25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087672.1 MGP_NODShiLtJ_G0033138.1 mouse_genomes_project 8 1370236 1408317 + MGP_NODShiLtJ_P0087672 Ccl25 protein_coding protein_coding MGP_NODShiLtJ_T0087673.1 MGP_NODShiLtJ_G0033138.1 mouse_genomes_project 8 1370239 1402922 + MGP_NODShiLtJ_P0087673 Ccl25 protein_coding protein_coding MGP_NODShiLtJ_T0087674.1 MGP_NODShiLtJ_G0033138.1 mouse_genomes_project 8 1370244 1378303 + Ccl25 protein_coding processed_transcript MGP_NODShiLtJ_T0087675.1 MGP_NODShiLtJ_G0033138.1 mouse_genomes_project 8 1398412 1408683 + MGP_NODShiLtJ_P0087675 Ccl25 protein_coding protein_coding MGP_NODShiLtJ_T0087676.1 MGP_NODShiLtJ_G0033138.1 mouse_genomes_project 8 1398412 1406650 + MGP_NODShiLtJ_P0087676 Ccl25 protein_coding protein_coding MGP_NODShiLtJ_T0088250.1 MGP_NODShiLtJ_G0033355.1 mouse_genomes_project 8 41213909 41300813 - MGP_NODShiLtJ_P0088250 Msr1 protein_coding protein_coding MGP_NODShiLtJ_T0088251.1 MGP_NODShiLtJ_G0033355.1 mouse_genomes_project 8 41258346 41300755 - MGP_NODShiLtJ_P0088251 Msr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088036.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24047290 24060042 - MGP_NODShiLtJ_P0088036 Adam3 protein_coding protein_coding MGP_NODShiLtJ_T0088037.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24047297 24102395 - MGP_NODShiLtJ_P0088037 Adam3 protein_coding protein_coding MGP_NODShiLtJ_T0088038.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24047366 24102341 - MGP_NODShiLtJ_P0088038 Adam3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088039.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24050801 24102331 - MGP_NODShiLtJ_P0088039 Adam3 protein_coding protein_coding MGP_NODShiLtJ_T0088040.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24082967 24102331 - MGP_NODShiLtJ_P0088040 Adam3 protein_coding protein_coding MGP_NODShiLtJ_T0088041.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24090672 24102328 - Adam3 protein_coding processed_transcript MGP_NODShiLtJ_T0088042.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24090746 24102343 - Adam3 protein_coding processed_transcript MGP_NODShiLtJ_T0088043.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24090747 24102368 - Adam3 protein_coding processed_transcript MGP_NODShiLtJ_T0088044.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24090786 24102331 - MGP_NODShiLtJ_P0088044 Adam3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088045.1 MGP_NODShiLtJ_G0033280.1 mouse_genomes_project 8 24090811 24102325 - MGP_NODShiLtJ_P0088045 Adam3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089829.1 MGP_NODShiLtJ_G0033847.1 mouse_genomes_project 8 118416443 118450953 - MGP_NODShiLtJ_P0089829 Kctd19 protein_coding protein_coding MGP_NODShiLtJ_T0089830.1 MGP_NODShiLtJ_G0033847.1 mouse_genomes_project 8 118416443 118450953 - MGP_NODShiLtJ_P0089830 Kctd19 protein_coding protein_coding MGP_NODShiLtJ_T0089831.1 MGP_NODShiLtJ_G0033847.1 mouse_genomes_project 8 118416578 118420330 - MGP_NODShiLtJ_P0089831 Kctd19 protein_coding protein_coding MGP_NODShiLtJ_T0089832.1 MGP_NODShiLtJ_G0033847.1 mouse_genomes_project 8 118428738 118450907 - MGP_NODShiLtJ_P0089832 Kctd19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011603.1 MGP_NODShiLtJ_G0009736.1 mouse_genomes_project 8 25133501 25133823 + Gm23094 misc_RNA misc_RNA MGP_NODShiLtJ_T0087936.1 MGP_NODShiLtJ_G0033237.1 mouse_genomes_project 8 20782228 20783341 - MGP_NODShiLtJ_P0087936 protein_coding protein_coding MGP_NODShiLtJ_T0087973.1 MGP_NODShiLtJ_G0033260.1 mouse_genomes_project 8 21689160 21715598 + MGP_NODShiLtJ_P0087973 Slc20a2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090027.1 MGP_NODShiLtJ_G0033925.1 mouse_genomes_project 8 123684938 123715280 - MGP_NODShiLtJ_P0090027 Calb2 protein_coding protein_coding MGP_NODShiLtJ_T0010848.1 MGP_NODShiLtJ_G0008981.1 mouse_genomes_project 8 18594568 18594658 - Gm27852 miRNA miRNA MGP_NODShiLtJ_T0089594.1 MGP_NODShiLtJ_G0033758.1 mouse_genomes_project 8 104610561 104612388 + MGP_NODShiLtJ_P0089594 Mt4 protein_coding protein_coding MGP_NODShiLtJ_T0087935.1 MGP_NODShiLtJ_G0033236.1 mouse_genomes_project 8 20782213 20783341 - MGP_NODShiLtJ_P0087935 protein_coding protein_coding MGP_NODShiLtJ_T0088939.1 MGP_NODShiLtJ_G0033558.1 mouse_genomes_project 8 79807748 79819134 - MGP_NODShiLtJ_P0088939 Ano8 protein_coding protein_coding MGP_NODShiLtJ_T0089650.1 MGP_NODShiLtJ_G0033777.1 mouse_genomes_project 8 105399609 105412101 - MGP_NODShiLtJ_P0089650 Dok4 protein_coding protein_coding MGP_NODShiLtJ_T0015855.1 MGP_NODShiLtJ_G0013963.1 mouse_genomes_project 8 49041999 49043001 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089558.1 MGP_NODShiLtJ_G0033749.1 mouse_genomes_project 8 103661638 103686096 - MGP_NODShiLtJ_P0089558 Ces1f protein_coding protein_coding MGP_NODShiLtJ_T0089559.1 MGP_NODShiLtJ_G0033749.1 mouse_genomes_project 8 103661990 103664142 - Ces1f protein_coding retained_intron MGP_NODShiLtJ_T0089560.1 MGP_NODShiLtJ_G0033749.1 mouse_genomes_project 8 103670936 103672828 - Ces1f protein_coding retained_intron MGP_NODShiLtJ_T0089561.1 MGP_NODShiLtJ_G0033749.1 mouse_genomes_project 8 103671388 103672955 - Ces1f protein_coding retained_intron MGP_NODShiLtJ_T0089562.1 MGP_NODShiLtJ_G0033749.1 mouse_genomes_project 8 103679504 103680927 - Ces1f protein_coding retained_intron MGP_NODShiLtJ_T0089563.1 MGP_NODShiLtJ_G0033749.1 mouse_genomes_project 8 103679813 103686076 - MGP_NODShiLtJ_P0089563 Ces1f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087946.1 MGP_NODShiLtJ_G0033247.1 mouse_genomes_project 8 21070641 21076302 + MGP_NODShiLtJ_P0087946 Fam90a1a protein_coding protein_coding MGP_NODShiLtJ_T0090608.1 MGP_NODShiLtJ_G0034100.1 mouse_genomes_project 8 142031098 142046440 - MGP_NODShiLtJ_P0090608 Tomm20 protein_coding protein_coding MGP_NODShiLtJ_T0090331.1 MGP_NODShiLtJ_G0034018.1 mouse_genomes_project 8 136273938 136330632 - MGP_NODShiLtJ_P0090331 Zcchc14 protein_coding protein_coding MGP_NODShiLtJ_T0090332.1 MGP_NODShiLtJ_G0034018.1 mouse_genomes_project 8 136275588 136279808 - MGP_NODShiLtJ_P0090332 Zcchc14 protein_coding protein_coding MGP_NODShiLtJ_T0090333.1 MGP_NODShiLtJ_G0034018.1 mouse_genomes_project 8 136281507 136282512 - Zcchc14 protein_coding retained_intron MGP_NODShiLtJ_T0090334.1 MGP_NODShiLtJ_G0034018.1 mouse_genomes_project 8 136283867 136306650 - Zcchc14 protein_coding retained_intron MGP_NODShiLtJ_T0090280.1 MGP_NODShiLtJ_G0034007.1 mouse_genomes_project 8 135218144 135284323 - MGP_NODShiLtJ_P0090280 Gm27021 protein_coding protein_coding MGP_NODShiLtJ_T0100814.1 MGP_NODShiLtJ_G0039208.1 mouse_genomes_project 8 57467956 57468072 + Gm23666 snoRNA snoRNA MGP_NODShiLtJ_T0089234.1 MGP_NODShiLtJ_G0033659.1 mouse_genomes_project 8 93841874 93850388 - MGP_NODShiLtJ_P0089234 Dcaf15 protein_coding protein_coding MGP_NODShiLtJ_T0089235.1 MGP_NODShiLtJ_G0033659.1 mouse_genomes_project 8 93842252 93847567 - MGP_NODShiLtJ_P0089235 Dcaf15 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089579.1 MGP_NODShiLtJ_G0033754.1 mouse_genomes_project 8 104416281 104462339 - MGP_NODShiLtJ_P0089579 Amfr protein_coding protein_coding MGP_NODShiLtJ_T0089580.1 MGP_NODShiLtJ_G0033754.1 mouse_genomes_project 8 104417595 104419610 - Amfr protein_coding retained_intron MGP_NODShiLtJ_T0089581.1 MGP_NODShiLtJ_G0033754.1 mouse_genomes_project 8 104417651 104418655 - Amfr protein_coding processed_transcript MGP_NODShiLtJ_T0089582.1 MGP_NODShiLtJ_G0033754.1 mouse_genomes_project 8 104446827 104461797 - MGP_NODShiLtJ_P0089582 Amfr protein_coding protein_coding MGP_NODShiLtJ_T0090318.1 MGP_NODShiLtJ_G0034013.1 mouse_genomes_project 8 135769954 135772679 + MGP_NODShiLtJ_P0090318 Foxc2 protein_coding protein_coding MGP_NODShiLtJ_T0088330.1 MGP_NODShiLtJ_G0033380.1 mouse_genomes_project 8 47921457 47964592 - MGP_NODShiLtJ_P0088330 Cyp4v3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088331.1 MGP_NODShiLtJ_G0033380.1 mouse_genomes_project 8 47961071 47994651 - MGP_NODShiLtJ_P0088331 Cyp4v3 protein_coding protein_coding MGP_NODShiLtJ_T0087562.1 MGP_NODShiLtJ_G0033109.1 mouse_genomes_project 8 423276 443556 + MGP_NODShiLtJ_P0087562 1700019B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0087563.1 MGP_NODShiLtJ_G0033109.1 mouse_genomes_project 8 423276 443556 + MGP_NODShiLtJ_P0087563 1700019B03Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087564.1 MGP_NODShiLtJ_G0033109.1 mouse_genomes_project 8 429644 443559 + MGP_NODShiLtJ_P0087564 1700019B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0009098.1 MGP_NODShiLtJ_G0007302.1 mouse_genomes_project 8 123823998 123826213 - Gm26832 lincRNA lincRNA MGP_NODShiLtJ_T0087923.1 MGP_NODShiLtJ_G0033225.1 mouse_genomes_project 8 18222991 18224936 + MGP_NODShiLtJ_P0087923 Defb3 protein_coding protein_coding MGP_NODShiLtJ_T0009048.1 MGP_NODShiLtJ_G0007273.1 mouse_genomes_project 8 97085601 97176334 + Gm27246 lincRNA lincRNA MGP_NODShiLtJ_T0090069.1 MGP_NODShiLtJ_G0033937.1 mouse_genomes_project 8 124652312 124656161 + MGP_NODShiLtJ_P0090069 Aars protein_coding protein_coding MGP_NODShiLtJ_T0090070.1 MGP_NODShiLtJ_G0033937.1 mouse_genomes_project 8 124653047 124664873 + Aars protein_coding retained_intron MGP_NODShiLtJ_T0090071.1 MGP_NODShiLtJ_G0033937.1 mouse_genomes_project 8 124653070 124677438 + MGP_NODShiLtJ_P0090071 Aars protein_coding protein_coding MGP_NODShiLtJ_T0090072.1 MGP_NODShiLtJ_G0033937.1 mouse_genomes_project 8 124653126 124666492 + Aars protein_coding retained_intron MGP_NODShiLtJ_T0090073.1 MGP_NODShiLtJ_G0033937.1 mouse_genomes_project 8 124661665 124662749 + Aars protein_coding retained_intron MGP_NODShiLtJ_T0090074.1 MGP_NODShiLtJ_G0033937.1 mouse_genomes_project 8 124663018 124664871 + Aars protein_coding retained_intron MGP_NODShiLtJ_T0090075.1 MGP_NODShiLtJ_G0033937.1 mouse_genomes_project 8 124667660 124669787 + Aars protein_coding retained_intron MGP_NODShiLtJ_T0015898.1 MGP_NODShiLtJ_G0014006.1 mouse_genomes_project 8 135351808 135352489 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100834.1 MGP_NODShiLtJ_G0039228.1 mouse_genomes_project 8 96932575 96932692 - Gm24781 snoRNA snoRNA MGP_NODShiLtJ_T0089069.1 MGP_NODShiLtJ_G0033600.1 mouse_genomes_project 8 83725746 83763226 + MGP_NODShiLtJ_P0089069 Tom1 protein_coding protein_coding MGP_NODShiLtJ_T0089070.1 MGP_NODShiLtJ_G0033600.1 mouse_genomes_project 8 83725746 83763226 + MGP_NODShiLtJ_P0089070 Tom1 protein_coding protein_coding MGP_NODShiLtJ_T0010921.1 MGP_NODShiLtJ_G0009054.1 mouse_genomes_project 8 138909146 138909228 + Mir1967 miRNA miRNA MGP_NODShiLtJ_T0090525.1 MGP_NODShiLtJ_G0034068.1 mouse_genomes_project 8 138764802 138767772 - MGP_NODShiLtJ_P0090525 Acta1 protein_coding protein_coding MGP_NODShiLtJ_T0089322.1 MGP_NODShiLtJ_G0033679.1 mouse_genomes_project 8 94656532 94659377 - MGP_NODShiLtJ_P0089322 protein_coding protein_coding MGP_NODShiLtJ_T0089104.1 MGP_NODShiLtJ_G0033611.1 mouse_genomes_project 8 87583008 87586644 - MGP_NODShiLtJ_P0089104 Pou4f2 protein_coding protein_coding MGP_NODShiLtJ_T0090416.1 MGP_NODShiLtJ_G0034039.1 mouse_genomes_project 8 137343538 137346807 - MGP_NODShiLtJ_P0090416 Pabpn1l protein_coding protein_coding MGP_NODShiLtJ_T0089245.1 MGP_NODShiLtJ_G0033663.1 mouse_genomes_project 8 93926034 93928954 - MGP_NODShiLtJ_P0089245 Nanos3 protein_coding protein_coding MGP_NODShiLtJ_T0015841.1 MGP_NODShiLtJ_G0013949.1 mouse_genomes_project 8 21358790 21359081 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089027.1 MGP_NODShiLtJ_G0033584.1 mouse_genomes_project 8 80650561 80654595 + MGP_NODShiLtJ_P0089027 Fam32a protein_coding protein_coding MGP_NODShiLtJ_T0087565.1 MGP_NODShiLtJ_G0033110.1 mouse_genomes_project 8 451012 455083 + MGP_NODShiLtJ_P0087565 Zfp358 protein_coding protein_coding MGP_NODShiLtJ_T0100797.1 MGP_NODShiLtJ_G0039191.1 mouse_genomes_project 8 17494681 17494810 - Gm25763 snoRNA snoRNA MGP_NODShiLtJ_T0087782.1 MGP_NODShiLtJ_G0033171.1 mouse_genomes_project 8 11413086 11422862 + MGP_NODShiLtJ_P0087782 F7 protein_coding protein_coding MGP_NODShiLtJ_T0087941.1 MGP_NODShiLtJ_G0033242.1 mouse_genomes_project 8 20978627 20984120 - MGP_NODShiLtJ_P0087941 Defb9 protein_coding protein_coding MGP_NODShiLtJ_T0089302.1 MGP_NODShiLtJ_G0033673.1 mouse_genomes_project 8 94494563 94497821 + MGP_NODShiLtJ_P0089302 Lyl1 protein_coding protein_coding MGP_NODShiLtJ_T0088614.1 MGP_NODShiLtJ_G0033459.1 mouse_genomes_project 8 74472040 74481407 + MGP_NODShiLtJ_P0088614 Npy1r protein_coding protein_coding MGP_NODShiLtJ_T0088421.1 MGP_NODShiLtJ_G0033397.1 mouse_genomes_project 8 49443176 49467359 + MGP_NODShiLtJ_P0088421 Casp3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087644.1 MGP_NODShiLtJ_G0033131.1 mouse_genomes_project 8 1258467 1276631 + MGP_NODShiLtJ_P0087644 Lrrc8e protein_coding protein_coding MGP_NODShiLtJ_T0088046.1 MGP_NODShiLtJ_G0033281.1 mouse_genomes_project 8 24103635 24186336 - MGP_NODShiLtJ_P0088046 Adam5 protein_coding protein_coding MGP_NODShiLtJ_T0088047.1 MGP_NODShiLtJ_G0033281.1 mouse_genomes_project 8 24103635 24194140 - MGP_NODShiLtJ_P0088047 Adam5 protein_coding protein_coding MGP_NODShiLtJ_T0088048.1 MGP_NODShiLtJ_G0033281.1 mouse_genomes_project 8 24103744 24194066 - Adam5 protein_coding processed_transcript MGP_NODShiLtJ_T0088049.1 MGP_NODShiLtJ_G0033281.1 mouse_genomes_project 8 24112672 24194450 - MGP_NODShiLtJ_P0088049 Adam5 protein_coding protein_coding MGP_NODShiLtJ_T0087877.1 MGP_NODShiLtJ_G0033205.1 mouse_genomes_project 8 13576141 13598445 + MGP_NODShiLtJ_P0087877 Kbtbd11 protein_coding protein_coding MGP_NODShiLtJ_T0087878.1 MGP_NODShiLtJ_G0033205.1 mouse_genomes_project 8 13576432 13592205 + Kbtbd11 protein_coding processed_transcript MGP_NODShiLtJ_T0087879.1 MGP_NODShiLtJ_G0033205.1 mouse_genomes_project 8 13592401 13598445 + MGP_NODShiLtJ_P0087879 Kbtbd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087880.1 MGP_NODShiLtJ_G0033205.1 mouse_genomes_project 8 13597501 13598076 + Kbtbd11 protein_coding processed_transcript MGP_NODShiLtJ_T0099566.1 MGP_NODShiLtJ_G0037960.1 mouse_genomes_project 8 117396205 117396312 + Gm22148 snRNA snRNA MGP_NODShiLtJ_T0009080.1 MGP_NODShiLtJ_G0007290.1 mouse_genomes_project 8 102725010 102725448 - lincRNA lincRNA MGP_NODShiLtJ_T0089180.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93378211 93410778 - MGP_NODShiLtJ_P0089180 Pkn1 protein_coding protein_coding MGP_NODShiLtJ_T0089181.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93378540 93405674 - MGP_NODShiLtJ_P0089181 Pkn1 protein_coding protein_coding MGP_NODShiLtJ_T0089182.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93378548 93410696 - MGP_NODShiLtJ_P0089182 Pkn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089183.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93378576 93383978 - Pkn1 protein_coding retained_intron MGP_NODShiLtJ_T0089184.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93379036 93380230 - Pkn1 protein_coding processed_transcript MGP_NODShiLtJ_T0089185.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93381476 93382041 - Pkn1 protein_coding retained_intron MGP_NODShiLtJ_T0089186.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93381927 93386230 - Pkn1 protein_coding processed_transcript MGP_NODShiLtJ_T0089187.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93386178 93390029 - Pkn1 protein_coding retained_intron MGP_NODShiLtJ_T0089188.1 MGP_NODShiLtJ_G0033643.1 mouse_genomes_project 8 93400675 93410766 - Pkn1 protein_coding retained_intron MGP_NODShiLtJ_T0089705.1 MGP_NODShiLtJ_G0033797.1 mouse_genomes_project 8 106298689 106393837 - MGP_NODShiLtJ_P0089705 Cnot1 protein_coding protein_coding MGP_NODShiLtJ_T0089706.1 MGP_NODShiLtJ_G0033797.1 mouse_genomes_project 8 106298689 106393837 - MGP_NODShiLtJ_P0089706 Cnot1 protein_coding protein_coding MGP_NODShiLtJ_T0089707.1 MGP_NODShiLtJ_G0033797.1 mouse_genomes_project 8 106298859 106393920 - MGP_NODShiLtJ_P0089707 Cnot1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089097.1 MGP_NODShiLtJ_G0033610.1 mouse_genomes_project 8 87349560 87357237 + MGP_NODShiLtJ_P0089097 protein_coding protein_coding MGP_NODShiLtJ_T0089098.1 MGP_NODShiLtJ_G0033610.1 mouse_genomes_project 8 87349565 87357095 + MGP_NODShiLtJ_P0089098 protein_coding protein_coding MGP_NODShiLtJ_T0089099.1 MGP_NODShiLtJ_G0033610.1 mouse_genomes_project 8 87349578 87354283 + protein_coding processed_transcript MGP_NODShiLtJ_T0089100.1 MGP_NODShiLtJ_G0033610.1 mouse_genomes_project 8 87349613 87354227 + protein_coding processed_transcript MGP_NODShiLtJ_T0089101.1 MGP_NODShiLtJ_G0033610.1 mouse_genomes_project 8 87349669 87540653 + MGP_NODShiLtJ_P0089101 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089102.1 MGP_NODShiLtJ_G0033610.1 mouse_genomes_project 8 87387805 87416377 + protein_coding retained_intron MGP_NODShiLtJ_T0089103.1 MGP_NODShiLtJ_G0033610.1 mouse_genomes_project 8 87537117 87540744 + protein_coding processed_transcript MGP_NODShiLtJ_T0088015.1 MGP_NODShiLtJ_G0033270.1 mouse_genomes_project 8 22379584 22417142 - MGP_NODShiLtJ_P0088015 Gpat4 protein_coding protein_coding MGP_NODShiLtJ_T0089653.1 MGP_NODShiLtJ_G0033779.1 mouse_genomes_project 8 105462438 105483150 + MGP_NODShiLtJ_P0089653 Adgrg5 protein_coding protein_coding MGP_NODShiLtJ_T0089654.1 MGP_NODShiLtJ_G0033779.1 mouse_genomes_project 8 105462438 105474368 + MGP_NODShiLtJ_P0089654 Adgrg5 protein_coding protein_coding MGP_NODShiLtJ_T0089655.1 MGP_NODShiLtJ_G0033779.1 mouse_genomes_project 8 105462438 105483160 + MGP_NODShiLtJ_P0089655 Adgrg5 protein_coding protein_coding MGP_NODShiLtJ_T0089656.1 MGP_NODShiLtJ_G0033779.1 mouse_genomes_project 8 105462443 105483150 + MGP_NODShiLtJ_P0089656 Adgrg5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089657.1 MGP_NODShiLtJ_G0033779.1 mouse_genomes_project 8 105474018 105474936 + Adgrg5 protein_coding processed_transcript MGP_NODShiLtJ_T0089195.1 MGP_NODShiLtJ_G0033645.1 mouse_genomes_project 8 93434466 93454158 - MGP_NODShiLtJ_P0089195 Adgre5 protein_coding protein_coding MGP_NODShiLtJ_T0089196.1 MGP_NODShiLtJ_G0033645.1 mouse_genomes_project 8 93434577 93454001 - MGP_NODShiLtJ_P0089196 Adgre5 protein_coding protein_coding MGP_NODShiLtJ_T0089197.1 MGP_NODShiLtJ_G0033645.1 mouse_genomes_project 8 93434579 93454005 - MGP_NODShiLtJ_P0089197 Adgre5 protein_coding protein_coding MGP_NODShiLtJ_T0089198.1 MGP_NODShiLtJ_G0033645.1 mouse_genomes_project 8 93435033 93436046 - Adgre5 protein_coding retained_intron MGP_NODShiLtJ_T0089199.1 MGP_NODShiLtJ_G0033645.1 mouse_genomes_project 8 93436463 93441136 - Adgre5 protein_coding retained_intron MGP_NODShiLtJ_T0089200.1 MGP_NODShiLtJ_G0033645.1 mouse_genomes_project 8 93440379 93441162 - Adgre5 protein_coding retained_intron MGP_NODShiLtJ_T0089201.1 MGP_NODShiLtJ_G0033645.1 mouse_genomes_project 8 93446373 93454015 - MGP_NODShiLtJ_P0089201 Adgre5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089060.1 MGP_NODShiLtJ_G0033598.1 mouse_genomes_project 8 83557444 83577461 + MGP_NODShiLtJ_P0089060 Isx protein_coding protein_coding MGP_NODShiLtJ_T0089061.1 MGP_NODShiLtJ_G0033598.1 mouse_genomes_project 8 83557811 83577102 + MGP_NODShiLtJ_P0089061 Isx protein_coding protein_coding MGP_NODShiLtJ_T0088587.1 MGP_NODShiLtJ_G0033449.1 mouse_genomes_project 8 72237486 72353958 - MGP_NODShiLtJ_P0088587 Klhl2 protein_coding protein_coding MGP_NODShiLtJ_T0088676.1 MGP_NODShiLtJ_G0033477.1 mouse_genomes_project 8 77847138 77855809 + Zfp964 protein_coding retained_intron MGP_NODShiLtJ_T0088677.1 MGP_NODShiLtJ_G0033477.1 mouse_genomes_project 8 77847151 77859902 + MGP_NODShiLtJ_P0088677 Zfp964 protein_coding protein_coding MGP_NODShiLtJ_T0088678.1 MGP_NODShiLtJ_G0033477.1 mouse_genomes_project 8 77852182 77857090 + MGP_NODShiLtJ_P0088678 Zfp964 protein_coding protein_coding MGP_NODShiLtJ_T0011605.1 MGP_NODShiLtJ_G0009738.1 mouse_genomes_project 8 31861785 31862009 - Gm23539 misc_RNA misc_RNA MGP_NODShiLtJ_T0090219.1 MGP_NODShiLtJ_G0033988.1 mouse_genomes_project 8 134009602 134063283 - MGP_NODShiLtJ_P0090219 Mbtps1 protein_coding protein_coding MGP_NODShiLtJ_T0090220.1 MGP_NODShiLtJ_G0033988.1 mouse_genomes_project 8 134009602 134063283 - MGP_NODShiLtJ_P0090220 Mbtps1 protein_coding protein_coding MGP_NODShiLtJ_T0089442.1 MGP_NODShiLtJ_G0033713.1 mouse_genomes_project 8 96421302 96522919 - MGP_NODShiLtJ_P0089442 Abcc12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089443.1 MGP_NODShiLtJ_G0033713.1 mouse_genomes_project 8 96443605 96522950 - MGP_NODShiLtJ_P0089443 Abcc12 protein_coding protein_coding MGP_NODShiLtJ_T0089444.1 MGP_NODShiLtJ_G0033713.1 mouse_genomes_project 8 96443609 96473707 - MGP_NODShiLtJ_P0089444 Abcc12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089445.1 MGP_NODShiLtJ_G0033713.1 mouse_genomes_project 8 96443867 96510005 - MGP_NODShiLtJ_P0089445 Abcc12 protein_coding protein_coding MGP_NODShiLtJ_T0089446.1 MGP_NODShiLtJ_G0033713.1 mouse_genomes_project 8 96443867 96510005 - MGP_NODShiLtJ_P0089446 Abcc12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089447.1 MGP_NODShiLtJ_G0033713.1 mouse_genomes_project 8 96443867 96510005 - MGP_NODShiLtJ_P0089447 Abcc12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089448.1 MGP_NODShiLtJ_G0033713.1 mouse_genomes_project 8 96472920 96522950 - MGP_NODShiLtJ_P0089448 Abcc12 protein_coding protein_coding MGP_NODShiLtJ_T0089903.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119253466 119260122 - MGP_NODShiLtJ_P0089903 Esrp2 protein_coding protein_coding MGP_NODShiLtJ_T0089904.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119255372 119259961 - MGP_NODShiLtJ_P0089904 Esrp2 protein_coding protein_coding MGP_NODShiLtJ_T0089905.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119255875 119256223 - Esrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0089906.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119255962 119257872 - Esrp2 protein_coding retained_intron MGP_NODShiLtJ_T0089907.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119256415 119257276 - Esrp2 protein_coding retained_intron MGP_NODShiLtJ_T0089908.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119256675 119257276 - Esrp2 protein_coding retained_intron MGP_NODShiLtJ_T0089909.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119256949 119258244 - Esrp2 protein_coding retained_intron MGP_NODShiLtJ_T0089910.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119257106 119258089 - Esrp2 protein_coding retained_intron MGP_NODShiLtJ_T0089911.1 MGP_NODShiLtJ_G0033879.1 mouse_genomes_project 8 119259330 119259833 - Esrp2 protein_coding retained_intron MGP_NODShiLtJ_T0090191.1 MGP_NODShiLtJ_G0033979.1 mouse_genomes_project 8 132033764 132044178 - MGP_NODShiLtJ_P0090191 Sdr42e1 protein_coding protein_coding MGP_NODShiLtJ_T0090192.1 MGP_NODShiLtJ_G0033979.1 mouse_genomes_project 8 132033767 132046320 - MGP_NODShiLtJ_P0090192 Sdr42e1 protein_coding protein_coding MGP_NODShiLtJ_T0090193.1 MGP_NODShiLtJ_G0033979.1 mouse_genomes_project 8 132035698 132046320 - MGP_NODShiLtJ_P0090193 Sdr42e1 protein_coding protein_coding MGP_NODShiLtJ_T0089774.1 MGP_NODShiLtJ_G0033826.1 mouse_genomes_project 8 117941614 117949404 + MGP_NODShiLtJ_P0089774 Ces2g protein_coding protein_coding MGP_NODShiLtJ_T0088713.1 MGP_NODShiLtJ_G0033490.1 mouse_genomes_project 8 78099290 78148106 - MGP_NODShiLtJ_P0088713 Gatad2a protein_coding protein_coding MGP_NODShiLtJ_T0088714.1 MGP_NODShiLtJ_G0033490.1 mouse_genomes_project 8 78099295 78199662 - MGP_NODShiLtJ_P0088714 Gatad2a protein_coding protein_coding MGP_NODShiLtJ_T0089766.1 MGP_NODShiLtJ_G0033822.1 mouse_genomes_project 8 117775358 117786348 + MGP_NODShiLtJ_P0089766 Ces2b protein_coding protein_coding MGP_NODShiLtJ_T0089767.1 MGP_NODShiLtJ_G0033822.1 mouse_genomes_project 8 117775387 117846749 + MGP_NODShiLtJ_P0089767 Ces2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005347.1 MGP_NODShiLtJ_G0004527.1 mouse_genomes_project 8 138707312 138709545 - 2810455O05Rik antisense antisense MGP_NODShiLtJ_T0089110.1 MGP_NODShiLtJ_G0033614.1 mouse_genomes_project 8 88236601 88411672 + MGP_NODShiLtJ_P0089110 Zfp827 protein_coding protein_coding MGP_NODShiLtJ_T0089111.1 MGP_NODShiLtJ_G0033614.1 mouse_genomes_project 8 88236601 88285314 + MGP_NODShiLtJ_P0089111 Zfp827 protein_coding protein_coding MGP_NODShiLtJ_T0089112.1 MGP_NODShiLtJ_G0033614.1 mouse_genomes_project 8 88237852 88408780 + MGP_NODShiLtJ_P0089112 Zfp827 protein_coding protein_coding MGP_NODShiLtJ_T0089113.1 MGP_NODShiLtJ_G0033614.1 mouse_genomes_project 8 88331638 88411695 + MGP_NODShiLtJ_P0089113 Zfp827 protein_coding protein_coding MGP_NODShiLtJ_T0089114.1 MGP_NODShiLtJ_G0033614.1 mouse_genomes_project 8 88333793 88411121 + MGP_NODShiLtJ_P0089114 Zfp827 protein_coding protein_coding MGP_NODShiLtJ_T0089115.1 MGP_NODShiLtJ_G0033614.1 mouse_genomes_project 8 88392758 88408778 + MGP_NODShiLtJ_P0089115 Zfp827 protein_coding protein_coding MGP_NODShiLtJ_T0089116.1 MGP_NODShiLtJ_G0033614.1 mouse_genomes_project 8 88395918 88407685 + MGP_NODShiLtJ_P0089116 Zfp827 protein_coding protein_coding MGP_NODShiLtJ_T0089722.1 MGP_NODShiLtJ_G0033803.1 mouse_genomes_project 8 116927372 116971303 + MGP_NODShiLtJ_P0089722 Cdh5 protein_coding protein_coding MGP_NODShiLtJ_T0088724.1 MGP_NODShiLtJ_G0033495.1 mouse_genomes_project 8 78303842 78331556 - MGP_NODShiLtJ_P0088724 Ncan protein_coding protein_coding MGP_NODShiLtJ_T0088681.1 MGP_NODShiLtJ_G0033480.1 mouse_genomes_project 8 77933791 77967392 - MGP_NODShiLtJ_P0088681 Gm20422 protein_coding protein_coding MGP_NODShiLtJ_T0088683.1 MGP_NODShiLtJ_G0033480.1 mouse_genomes_project 8 77934113 77959338 - MGP_NODShiLtJ_P0088683 Gm20422 protein_coding protein_coding MGP_NODShiLtJ_T0088507.1 MGP_NODShiLtJ_G0033430.1 mouse_genomes_project 8 63201922 63337177 - MGP_NODShiLtJ_P0088507 Galnt7 protein_coding protein_coding MGP_NODShiLtJ_T0088508.1 MGP_NODShiLtJ_G0033430.1 mouse_genomes_project 8 63202794 63337149 - MGP_NODShiLtJ_P0088508 Galnt7 protein_coding protein_coding MGP_NODShiLtJ_T0088509.1 MGP_NODShiLtJ_G0033430.1 mouse_genomes_project 8 63204118 63218291 - Galnt7 protein_coding processed_transcript MGP_NODShiLtJ_T0088510.1 MGP_NODShiLtJ_G0033430.1 mouse_genomes_project 8 63221828 63337178 - Galnt7 protein_coding retained_intron MGP_NODShiLtJ_T0088175.1 MGP_NODShiLtJ_G0033328.1 mouse_genomes_project 8 33950349 33951191 + MGP_NODShiLtJ_P0088175 5930422O12Rik protein_coding protein_coding MGP_NODShiLtJ_T0089713.1 MGP_NODShiLtJ_G0033800.1 mouse_genomes_project 8 110410570 110919923 - MGP_NODShiLtJ_P0089713 Cdh8 protein_coding protein_coding MGP_NODShiLtJ_T0089714.1 MGP_NODShiLtJ_G0033800.1 mouse_genomes_project 8 110410982 110919923 - MGP_NODShiLtJ_P0089714 Cdh8 protein_coding protein_coding MGP_NODShiLtJ_T0089715.1 MGP_NODShiLtJ_G0033800.1 mouse_genomes_project 8 110415587 110919935 - MGP_NODShiLtJ_P0089715 Cdh8 protein_coding protein_coding MGP_NODShiLtJ_T0089716.1 MGP_NODShiLtJ_G0033800.1 mouse_genomes_project 8 110415778 110919815 - MGP_NODShiLtJ_P0089716 Cdh8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089717.1 MGP_NODShiLtJ_G0033800.1 mouse_genomes_project 8 110415778 110919967 - MGP_NODShiLtJ_P0089717 Cdh8 protein_coding protein_coding MGP_NODShiLtJ_T0089718.1 MGP_NODShiLtJ_G0033800.1 mouse_genomes_project 8 110629394 110756303 - Cdh8 protein_coding retained_intron MGP_NODShiLtJ_T0089719.1 MGP_NODShiLtJ_G0033800.1 mouse_genomes_project 8 110688486 110919935 - MGP_NODShiLtJ_P0089719 Cdh8 protein_coding protein_coding MGP_NODShiLtJ_T0087686.1 MGP_NODShiLtJ_G0033140.1 mouse_genomes_project 8 1674466 1692441 + MGP_NODShiLtJ_P0087686 Zfp958 protein_coding protein_coding MGP_NODShiLtJ_T0087687.1 MGP_NODShiLtJ_G0033140.1 mouse_genomes_project 8 1688731 1692272 + MGP_NODShiLtJ_P0087687 Zfp958 protein_coding protein_coding MGP_NODShiLtJ_T0015864.1 MGP_NODShiLtJ_G0013972.1 mouse_genomes_project 8 76876447 76877072 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088679.1 MGP_NODShiLtJ_G0033478.1 mouse_genomes_project 8 77888117 77892510 - MGP_NODShiLtJ_P0088679 Zfp869 protein_coding protein_coding MGP_NODShiLtJ_T0089410.1 MGP_NODShiLtJ_G0033699.1 mouse_genomes_project 8 94911674 94913402 + Wdr83os protein_coding retained_intron MGP_NODShiLtJ_T0089411.1 MGP_NODShiLtJ_G0033699.1 mouse_genomes_project 8 94911712 94912711 + MGP_NODShiLtJ_P0089411 Wdr83os protein_coding protein_coding MGP_NODShiLtJ_T0009030.1 MGP_NODShiLtJ_G0007257.1 mouse_genomes_project 8 79294324 79314214 - lincRNA lincRNA MGP_NODShiLtJ_T0089503.1 MGP_NODShiLtJ_G0033729.1 mouse_genomes_project 8 99133659 99151964 - MGP_NODShiLtJ_P0089503 Sall1 protein_coding protein_coding MGP_NODShiLtJ_T0090064.1 MGP_NODShiLtJ_G0033935.1 mouse_genomes_project 8 124578865 124584907 - protein_coding retained_intron MGP_NODShiLtJ_T0090065.1 MGP_NODShiLtJ_G0033935.1 mouse_genomes_project 8 124583352 124606235 - MGP_NODShiLtJ_P0090065 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090066.1 MGP_NODShiLtJ_G0033935.1 mouse_genomes_project 8 124584745 124606282 - protein_coding retained_intron MGP_NODShiLtJ_T0100798.1 MGP_NODShiLtJ_G0039192.1 mouse_genomes_project 8 17830363 17830466 + Gm22551 snoRNA snoRNA MGP_NODShiLtJ_T0087694.1 MGP_NODShiLtJ_G0033146.1 mouse_genomes_project 8 6690420 6693348 + MGP_NODShiLtJ_P0087694 protein_coding protein_coding MGP_NODShiLtJ_T0088520.1 MGP_NODShiLtJ_G0033432.1 mouse_genomes_project 8 64999313 65001855 + MGP_NODShiLtJ_P0088520 BC030500 protein_coding protein_coding MGP_NODShiLtJ_T0088521.1 MGP_NODShiLtJ_G0033432.1 mouse_genomes_project 8 64999815 65000755 + MGP_NODShiLtJ_P0088521 BC030500 protein_coding protein_coding MGP_NODShiLtJ_T0010872.1 MGP_NODShiLtJ_G0009005.1 mouse_genomes_project 8 93664761 93664904 - Gm44330 miRNA miRNA MGP_NODShiLtJ_T0010918.1 MGP_NODShiLtJ_G0009051.1 mouse_genomes_project 8 137346332 137346443 - Mir6396 miRNA miRNA MGP_NODShiLtJ_T0089857.1 MGP_NODShiLtJ_G0033857.1 mouse_genomes_project 8 118758834 118762689 - MGP_NODShiLtJ_P0089857 Acd protein_coding protein_coding MGP_NODShiLtJ_T0088164.1 MGP_NODShiLtJ_G0033321.1 mouse_genomes_project 8 31443284 31453623 - MGP_NODShiLtJ_P0088164 Mak16 protein_coding protein_coding MGP_NODShiLtJ_T0088947.1 MGP_NODShiLtJ_G0033560.1 mouse_genomes_project 8 79833943 79848225 - MGP_NODShiLtJ_P0088947 Plvap protein_coding protein_coding MGP_NODShiLtJ_T0089044.1 MGP_NODShiLtJ_G0033593.1 mouse_genomes_project 8 81029355 81035183 - MGP_NODShiLtJ_P0089044 Smim7 protein_coding protein_coding MGP_NODShiLtJ_T0089045.1 MGP_NODShiLtJ_G0033593.1 mouse_genomes_project 8 81031654 81035144 - MGP_NODShiLtJ_P0089045 Smim7 protein_coding protein_coding MGP_NODShiLtJ_T0089046.1 MGP_NODShiLtJ_G0033593.1 mouse_genomes_project 8 81034682 81035157 - Smim7 protein_coding retained_intron MGP_NODShiLtJ_T0088449.1 MGP_NODShiLtJ_G0033410.1 mouse_genomes_project 8 51083157 51126094 + MGP_NODShiLtJ_P0088449 Dctd protein_coding protein_coding MGP_NODShiLtJ_T0088450.1 MGP_NODShiLtJ_G0033410.1 mouse_genomes_project 8 51093988 51127150 + MGP_NODShiLtJ_P0088450 Dctd protein_coding protein_coding MGP_NODShiLtJ_T0088451.1 MGP_NODShiLtJ_G0033410.1 mouse_genomes_project 8 51094043 51127148 + MGP_NODShiLtJ_P0088451 Dctd protein_coding protein_coding MGP_NODShiLtJ_T0088452.1 MGP_NODShiLtJ_G0033410.1 mouse_genomes_project 8 51094192 51127148 + MGP_NODShiLtJ_P0088452 Dctd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088453.1 MGP_NODShiLtJ_G0033410.1 mouse_genomes_project 8 51094195 51123176 + Dctd protein_coding retained_intron MGP_NODShiLtJ_T0088454.1 MGP_NODShiLtJ_G0033410.1 mouse_genomes_project 8 51094219 51124076 + Dctd protein_coding processed_transcript MGP_NODShiLtJ_T0088455.1 MGP_NODShiLtJ_G0033410.1 mouse_genomes_project 8 51094241 51138717 + MGP_NODShiLtJ_P0088455 Dctd protein_coding protein_coding MGP_NODShiLtJ_T0088031.1 MGP_NODShiLtJ_G0033278.1 mouse_genomes_project 8 23942913 23955172 - MGP_NODShiLtJ_P0088031 Ido1 protein_coding protein_coding MGP_NODShiLtJ_T0088032.1 MGP_NODShiLtJ_G0033278.1 mouse_genomes_project 8 23942913 23956515 - MGP_NODShiLtJ_P0088032 Ido1 protein_coding protein_coding MGP_NODShiLtJ_T0088617.1 MGP_NODShiLtJ_G0033462.1 mouse_genomes_project 8 75420849 75428557 + MGP_NODShiLtJ_P0088617 Nat2 protein_coding protein_coding MGP_NODShiLtJ_T0088618.1 MGP_NODShiLtJ_G0033462.1 mouse_genomes_project 8 75420930 75428561 + MGP_NODShiLtJ_P0088618 Nat2 protein_coding protein_coding MGP_NODShiLtJ_T0015850.1 MGP_NODShiLtJ_G0013958.1 mouse_genomes_project 8 38847748 38848764 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088592.1 MGP_NODShiLtJ_G0033453.1 mouse_genomes_project 8 72512372 72518086 - MGP_NODShiLtJ_P0088592 protein_coding protein_coding MGP_NODShiLtJ_T0088593.1 MGP_NODShiLtJ_G0033453.1 mouse_genomes_project 8 72514252 72537633 - protein_coding processed_transcript MGP_NODShiLtJ_T0088594.1 MGP_NODShiLtJ_G0033453.1 mouse_genomes_project 8 72527930 72537709 - MGP_NODShiLtJ_P0088594 protein_coding protein_coding MGP_NODShiLtJ_T0088595.1 MGP_NODShiLtJ_G0033453.1 mouse_genomes_project 8 72527930 72537873 - MGP_NODShiLtJ_P0088595 protein_coding protein_coding MGP_NODShiLtJ_T0088864.1 MGP_NODShiLtJ_G0033532.1 mouse_genomes_project 8 79053754 79068068 - MGP_NODShiLtJ_P0088864 Mast3 protein_coding protein_coding MGP_NODShiLtJ_T0089106.1 MGP_NODShiLtJ_G0033613.1 mouse_genomes_project 8 87993809 88010420 - MGP_NODShiLtJ_P0089106 Lsm6 protein_coding protein_coding MGP_NODShiLtJ_T0089107.1 MGP_NODShiLtJ_G0033613.1 mouse_genomes_project 8 87995394 88010420 - MGP_NODShiLtJ_P0089107 Lsm6 protein_coding protein_coding MGP_NODShiLtJ_T0089108.1 MGP_NODShiLtJ_G0033613.1 mouse_genomes_project 8 87996980 87999154 - Lsm6 protein_coding retained_intron MGP_NODShiLtJ_T0089109.1 MGP_NODShiLtJ_G0033613.1 mouse_genomes_project 8 87997001 88002158 - Lsm6 protein_coding retained_intron MGP_NODShiLtJ_T0088995.1 MGP_NODShiLtJ_G0033574.1 mouse_genomes_project 8 80257362 80283013 + MGP_NODShiLtJ_P0088995 protein_coding protein_coding MGP_NODShiLtJ_T0088996.1 MGP_NODShiLtJ_G0033574.1 mouse_genomes_project 8 80257424 80263691 + MGP_NODShiLtJ_P0088996 protein_coding protein_coding MGP_NODShiLtJ_T0088997.1 MGP_NODShiLtJ_G0033574.1 mouse_genomes_project 8 80257710 80258077 + protein_coding processed_transcript MGP_NODShiLtJ_T0090518.1 MGP_NODShiLtJ_G0034064.1 mouse_genomes_project 8 138496243 138498300 + Rhou protein_coding retained_intron MGP_NODShiLtJ_T0090519.1 MGP_NODShiLtJ_G0034064.1 mouse_genomes_project 8 138496243 138506253 + MGP_NODShiLtJ_P0090519 Rhou protein_coding protein_coding MGP_NODShiLtJ_T0089848.1 MGP_NODShiLtJ_G0033855.1 mouse_genomes_project 8 118693621 118742288 + Ctcf protein_coding processed_transcript MGP_NODShiLtJ_T0089849.1 MGP_NODShiLtJ_G0033855.1 mouse_genomes_project 8 118693632 118743563 + MGP_NODShiLtJ_P0089849 Ctcf protein_coding protein_coding MGP_NODShiLtJ_T0089850.1 MGP_NODShiLtJ_G0033855.1 mouse_genomes_project 8 118695000 118724686 + Ctcf protein_coding processed_transcript MGP_NODShiLtJ_T0089851.1 MGP_NODShiLtJ_G0033855.1 mouse_genomes_project 8 118695131 118724403 + Ctcf protein_coding processed_transcript MGP_NODShiLtJ_T0089852.1 MGP_NODShiLtJ_G0033855.1 mouse_genomes_project 8 118736445 118741258 + Ctcf protein_coding retained_intron MGP_NODShiLtJ_T0089853.1 MGP_NODShiLtJ_G0033855.1 mouse_genomes_project 8 118736445 118740014 + Ctcf protein_coding processed_transcript MGP_NODShiLtJ_T0087626.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1197074 1218982 + protein_coding retained_intron MGP_NODShiLtJ_T0087627.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1197074 1225755 + MGP_NODShiLtJ_P0087627 protein_coding protein_coding MGP_NODShiLtJ_T0087628.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1197074 1240109 + MGP_NODShiLtJ_P0087628 protein_coding protein_coding MGP_NODShiLtJ_T0087629.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1197081 1240284 + MGP_NODShiLtJ_P0087629 protein_coding protein_coding MGP_NODShiLtJ_T0087630.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1197094 1240104 + MGP_NODShiLtJ_P0087630 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087631.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1197108 1233786 + protein_coding retained_intron MGP_NODShiLtJ_T0087632.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1197246 1240104 + MGP_NODShiLtJ_P0087632 protein_coding protein_coding MGP_NODShiLtJ_T0087633.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1219289 1220131 + protein_coding retained_intron MGP_NODShiLtJ_T0087634.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1223345 1235137 + protein_coding processed_transcript MGP_NODShiLtJ_T0087635.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1232853 1237783 + protein_coding retained_intron MGP_NODShiLtJ_T0087636.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1235432 1240100 + protein_coding retained_intron MGP_NODShiLtJ_T0087637.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1235676 1238398 + protein_coding retained_intron MGP_NODShiLtJ_T0087638.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1237786 1238661 + protein_coding retained_intron MGP_NODShiLtJ_T0087639.1 MGP_NODShiLtJ_G0033129.1 mouse_genomes_project 8 1238306 1243315 + MGP_NODShiLtJ_P0087639 protein_coding protein_coding MGP_NODShiLtJ_T0087944.1 MGP_NODShiLtJ_G0033245.1 mouse_genomes_project 8 21046486 21046705 + MGP_NODShiLtJ_P0087944 Defb35 protein_coding protein_coding MGP_NODShiLtJ_T0099555.1 MGP_NODShiLtJ_G0037949.1 mouse_genomes_project 8 86909291 86909397 + Gm23981 snRNA snRNA MGP_NODShiLtJ_T0089015.1 MGP_NODShiLtJ_G0033578.1 mouse_genomes_project 8 80390200 80412287 - MGP_NODShiLtJ_P0089015 Cyp4f18 protein_coding protein_coding MGP_NODShiLtJ_T0089016.1 MGP_NODShiLtJ_G0033578.1 mouse_genomes_project 8 80390201 80394613 - Cyp4f18 protein_coding processed_transcript MGP_NODShiLtJ_T0089017.1 MGP_NODShiLtJ_G0033578.1 mouse_genomes_project 8 80391272 80394929 - Cyp4f18 protein_coding processed_transcript MGP_NODShiLtJ_T0087957.1 MGP_NODShiLtJ_G0033252.1 mouse_genomes_project 8 21248345 21286433 - MGP_NODShiLtJ_P0087957 Nek3 protein_coding protein_coding MGP_NODShiLtJ_T0087958.1 MGP_NODShiLtJ_G0033252.1 mouse_genomes_project 8 21248345 21286456 - MGP_NODShiLtJ_P0087958 Nek3 protein_coding protein_coding MGP_NODShiLtJ_T0087959.1 MGP_NODShiLtJ_G0033252.1 mouse_genomes_project 8 21248348 21281493 - MGP_NODShiLtJ_P0087959 Nek3 protein_coding protein_coding MGP_NODShiLtJ_T0087960.1 MGP_NODShiLtJ_G0033252.1 mouse_genomes_project 8 21248748 21252366 - Nek3 protein_coding retained_intron MGP_NODShiLtJ_T0087723.1 MGP_NODShiLtJ_G0033161.1 mouse_genomes_project 8 9933848 9965331 - MGP_NODShiLtJ_P0087723 1700016D06Rik protein_coding protein_coding MGP_NODShiLtJ_T0087724.1 MGP_NODShiLtJ_G0033161.1 mouse_genomes_project 8 9934402 9940901 - 1700016D06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0087725.1 MGP_NODShiLtJ_G0033161.1 mouse_genomes_project 8 9934403 9988203 - MGP_NODShiLtJ_P0087725 1700016D06Rik protein_coding protein_coding MGP_NODShiLtJ_T0087726.1 MGP_NODShiLtJ_G0033161.1 mouse_genomes_project 8 9934404 9942770 - MGP_NODShiLtJ_P0087726 1700016D06Rik protein_coding protein_coding MGP_NODShiLtJ_T0090091.1 MGP_NODShiLtJ_G0033942.1 mouse_genomes_project 8 124960560 124987930 - MGP_NODShiLtJ_P0090091 Mlkl protein_coding protein_coding MGP_NODShiLtJ_T0090092.1 MGP_NODShiLtJ_G0033942.1 mouse_genomes_project 8 124960563 124987930 - MGP_NODShiLtJ_P0090092 Mlkl protein_coding protein_coding MGP_NODShiLtJ_T0090093.1 MGP_NODShiLtJ_G0033942.1 mouse_genomes_project 8 124960565 124964877 - Mlkl protein_coding processed_transcript MGP_NODShiLtJ_T0090094.1 MGP_NODShiLtJ_G0033942.1 mouse_genomes_project 8 124981555 124987546 - MGP_NODShiLtJ_P0090094 Mlkl protein_coding protein_coding MGP_NODShiLtJ_T0089810.1 MGP_NODShiLtJ_G0033840.1 mouse_genomes_project 8 118324863 118334767 + MGP_NODShiLtJ_P0089810 E2f4 protein_coding protein_coding MGP_NODShiLtJ_T0089122.1 MGP_NODShiLtJ_G0033618.1 mouse_genomes_project 8 88902743 88941593 + MGP_NODShiLtJ_P0089122 Otud4 protein_coding protein_coding MGP_NODShiLtJ_T0089123.1 MGP_NODShiLtJ_G0033618.1 mouse_genomes_project 8 88902829 88941541 + MGP_NODShiLtJ_P0089123 Otud4 protein_coding protein_coding MGP_NODShiLtJ_T0089124.1 MGP_NODShiLtJ_G0033618.1 mouse_genomes_project 8 88915247 88923088 + Otud4 protein_coding retained_intron MGP_NODShiLtJ_T0089125.1 MGP_NODShiLtJ_G0033618.1 mouse_genomes_project 8 88915657 88925111 + Otud4 protein_coding retained_intron MGP_NODShiLtJ_T0089126.1 MGP_NODShiLtJ_G0033618.1 mouse_genomes_project 8 88924951 88932357 + MGP_NODShiLtJ_P0089126 Otud4 protein_coding protein_coding MGP_NODShiLtJ_T0089127.1 MGP_NODShiLtJ_G0033618.1 mouse_genomes_project 8 88930690 88935247 + MGP_NODShiLtJ_P0089127 Otud4 protein_coding protein_coding MGP_NODShiLtJ_T0100832.1 MGP_NODShiLtJ_G0039226.1 mouse_genomes_project 8 94879717 94879787 + Gm25506 snoRNA snoRNA MGP_NODShiLtJ_T0088726.1 MGP_NODShiLtJ_G0033497.1 mouse_genomes_project 8 78342001 78344408 + MGP_NODShiLtJ_P0088726 Nr2c2ap protein_coding protein_coding MGP_NODShiLtJ_T0015834.1 MGP_NODShiLtJ_G0013942.1 mouse_genomes_project 8 18595153 18597834 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010839.1 MGP_NODShiLtJ_G0008972.1 mouse_genomes_project 8 7869105 7869258 - miRNA miRNA MGP_NODShiLtJ_T0015836.1 MGP_NODShiLtJ_G0013944.1 mouse_genomes_project 8 20153010 20156759 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090426.1 MGP_NODShiLtJ_G0034043.1 mouse_genomes_project 8 137623503 137716138 - MGP_NODShiLtJ_P0090426 Ankrd11 protein_coding protein_coding MGP_NODShiLtJ_T0090427.1 MGP_NODShiLtJ_G0034043.1 mouse_genomes_project 8 137623988 137716138 - MGP_NODShiLtJ_P0090427 Ankrd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090428.1 MGP_NODShiLtJ_G0034043.1 mouse_genomes_project 8 137637173 137656460 - MGP_NODShiLtJ_P0090428 Ankrd11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090429.1 MGP_NODShiLtJ_G0034043.1 mouse_genomes_project 8 137646229 137716118 - Ankrd11 protein_coding retained_intron MGP_NODShiLtJ_T0089600.1 MGP_NODShiLtJ_G0033763.1 mouse_genomes_project 8 104826164 104863218 + MGP_NODShiLtJ_P0089600 Slc12a3 protein_coding protein_coding MGP_NODShiLtJ_T0089130.1 MGP_NODShiLtJ_G0033621.1 mouse_genomes_project 8 89260474 89285466 - Hhip protein_coding processed_transcript MGP_NODShiLtJ_T0089131.1 MGP_NODShiLtJ_G0033621.1 mouse_genomes_project 8 89264974 89358891 - MGP_NODShiLtJ_P0089131 Hhip protein_coding protein_coding MGP_NODShiLtJ_T0097846.1 MGP_NODShiLtJ_G0036258.1 mouse_genomes_project 8 138730216 138731219 + pseudogene pseudogene MGP_NODShiLtJ_T0010899.1 MGP_NODShiLtJ_G0009032.1 mouse_genomes_project 8 118672110 118672218 + Mir1966 miRNA miRNA MGP_NODShiLtJ_T0087977.1 MGP_NODShiLtJ_G0033263.1 mouse_genomes_project 8 21802550 21831209 - MGP_NODShiLtJ_P0087977 Polb protein_coding protein_coding MGP_NODShiLtJ_T0008998.1 MGP_NODShiLtJ_G0007230.1 mouse_genomes_project 8 26424699 26435473 - lincRNA lincRNA MGP_NODShiLtJ_T0088218.1 MGP_NODShiLtJ_G0033339.1 mouse_genomes_project 8 34735165 34752170 + MGP_NODShiLtJ_P0088218 Saraf protein_coding protein_coding MGP_NODShiLtJ_T0089079.1 MGP_NODShiLtJ_G0033605.1 mouse_genomes_project 8 85932440 85942741 + MGP_NODShiLtJ_P0089079 Nr3c2 protein_coding protein_coding MGP_NODShiLtJ_T0089080.1 MGP_NODShiLtJ_G0033605.1 mouse_genomes_project 8 85932770 86301181 + MGP_NODShiLtJ_P0089080 Nr3c2 protein_coding protein_coding MGP_NODShiLtJ_T0089081.1 MGP_NODShiLtJ_G0033605.1 mouse_genomes_project 8 85935286 86301176 + MGP_NODShiLtJ_P0089081 Nr3c2 protein_coding protein_coding MGP_NODShiLtJ_T0089082.1 MGP_NODShiLtJ_G0033605.1 mouse_genomes_project 8 85935286 86299168 + MGP_NODShiLtJ_P0089082 Nr3c2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089083.1 MGP_NODShiLtJ_G0033605.1 mouse_genomes_project 8 85935345 85942984 + MGP_NODShiLtJ_P0089083 Nr3c2 protein_coding protein_coding MGP_NODShiLtJ_T0089084.1 MGP_NODShiLtJ_G0033605.1 mouse_genomes_project 8 85935474 86299835 + MGP_NODShiLtJ_P0089084 Nr3c2 protein_coding protein_coding MGP_NODShiLtJ_T0089085.1 MGP_NODShiLtJ_G0033605.1 mouse_genomes_project 8 85942599 86298702 + MGP_NODShiLtJ_P0089085 Nr3c2 protein_coding protein_coding MGP_NODShiLtJ_T0089086.1 MGP_NODShiLtJ_G0033605.1 mouse_genomes_project 8 86181559 86239973 + Nr3c2 protein_coding processed_transcript MGP_NODShiLtJ_T0015829.1 MGP_NODShiLtJ_G0013937.1 mouse_genomes_project 8 13666344 13667367 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090283.1 MGP_NODShiLtJ_G0034008.1 mouse_genomes_project 8 135269298 135284222 - MGP_NODShiLtJ_P0090283 Emc8 protein_coding protein_coding MGP_NODShiLtJ_T0090284.1 MGP_NODShiLtJ_G0034008.1 mouse_genomes_project 8 135271362 135284256 - Emc8 protein_coding retained_intron MGP_NODShiLtJ_T0090285.1 MGP_NODShiLtJ_G0034008.1 mouse_genomes_project 8 135273235 135284817 - MGP_NODShiLtJ_P0090285 Emc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090286.1 MGP_NODShiLtJ_G0034008.1 mouse_genomes_project 8 135273408 135284007 - MGP_NODShiLtJ_P0090286 Emc8 protein_coding protein_coding MGP_NODShiLtJ_T0090287.1 MGP_NODShiLtJ_G0034008.1 mouse_genomes_project 8 135273434 135284080 - MGP_NODShiLtJ_P0090287 Emc8 protein_coding protein_coding MGP_NODShiLtJ_T0090288.1 MGP_NODShiLtJ_G0034008.1 mouse_genomes_project 8 135275358 135284247 - MGP_NODShiLtJ_P0090288 Emc8 protein_coding protein_coding MGP_NODShiLtJ_T0090289.1 MGP_NODShiLtJ_G0034008.1 mouse_genomes_project 8 135276031 135284357 - Emc8 protein_coding retained_intron MGP_NODShiLtJ_T0005349.1 MGP_NODShiLtJ_G0004529.1 mouse_genomes_project 8 139235207 139243306 - Gm15775 antisense antisense MGP_NODShiLtJ_T0088872.1 MGP_NODShiLtJ_G0033538.1 mouse_genomes_project 8 79168166 79178269 - MGP_NODShiLtJ_P0088872 Slc5a5 protein_coding protein_coding MGP_NODShiLtJ_T0087931.1 MGP_NODShiLtJ_G0033232.1 mouse_genomes_project 8 20661510 20661710 + MGP_NODShiLtJ_P0087931 protein_coding protein_coding MGP_NODShiLtJ_T0088856.1 MGP_NODShiLtJ_G0033529.1 mouse_genomes_project 8 79032719 79034992 - MGP_NODShiLtJ_P0088856 Mpv17l2 protein_coding protein_coding MGP_NODShiLtJ_T0009029.1 MGP_NODShiLtJ_G0007256.1 mouse_genomes_project 8 79052452 79053461 + 2010320M18Rik lincRNA lincRNA MGP_NODShiLtJ_T0089375.1 MGP_NODShiLtJ_G0033690.1 mouse_genomes_project 8 94812661 94827329 + MGP_NODShiLtJ_P0089375 Hook2 protein_coding protein_coding MGP_NODShiLtJ_T0087783.1 MGP_NODShiLtJ_G0033172.1 mouse_genomes_project 8 11424374 11442895 + MGP_NODShiLtJ_P0087783 F10 protein_coding protein_coding MGP_NODShiLtJ_T0087784.1 MGP_NODShiLtJ_G0033172.1 mouse_genomes_project 8 11424436 11443720 + MGP_NODShiLtJ_P0087784 F10 protein_coding protein_coding MGP_NODShiLtJ_T0087785.1 MGP_NODShiLtJ_G0033172.1 mouse_genomes_project 8 11424639 11433143 + MGP_NODShiLtJ_P0087785 F10 protein_coding protein_coding MGP_NODShiLtJ_T0015869.1 MGP_NODShiLtJ_G0013977.1 mouse_genomes_project 8 88060171 88061677 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087696.1 MGP_NODShiLtJ_G0033148.1 mouse_genomes_project 8 7267158 7869396 - MGP_NODShiLtJ_P0087696 Fam155a protein_coding protein_coding MGP_NODShiLtJ_T0090222.1 MGP_NODShiLtJ_G0033990.1 mouse_genomes_project 8 134086201 134111232 + MGP_NODShiLtJ_P0090222 Dnaaf1 protein_coding protein_coding MGP_NODShiLtJ_T0089537.1 MGP_NODShiLtJ_G0033739.1 mouse_genomes_project 8 103053723 103060340 + MGP_NODShiLtJ_P0089537 Irx6 protein_coding protein_coding MGP_NODShiLtJ_T0089538.1 MGP_NODShiLtJ_G0033739.1 mouse_genomes_project 8 103054217 103060340 + MGP_NODShiLtJ_P0089538 Irx6 protein_coding protein_coding MGP_NODShiLtJ_T0005333.1 MGP_NODShiLtJ_G0004514.1 mouse_genomes_project 8 126388492 126404580 - Gm26994 antisense antisense MGP_NODShiLtJ_T0002292.1 MGP_NODShiLtJ_G0002202.1 mouse_genomes_project 8 134684388 134685913 + TEC TEC MGP_NODShiLtJ_T0088119.1 MGP_NODShiLtJ_G0033299.1 mouse_genomes_project 8 25429866 25464532 - MGP_NODShiLtJ_P0088119 Hgsnat protein_coding protein_coding MGP_NODShiLtJ_T0089584.1 MGP_NODShiLtJ_G0033756.1 mouse_genomes_project 8 104488287 104518910 + MGP_NODShiLtJ_P0089584 Ogfod1 protein_coding protein_coding MGP_NODShiLtJ_T0089585.1 MGP_NODShiLtJ_G0033756.1 mouse_genomes_project 8 104488327 104518910 + MGP_NODShiLtJ_P0089585 Ogfod1 protein_coding protein_coding MGP_NODShiLtJ_T0089586.1 MGP_NODShiLtJ_G0033756.1 mouse_genomes_project 8 104488349 104490540 + Ogfod1 protein_coding retained_intron MGP_NODShiLtJ_T0089587.1 MGP_NODShiLtJ_G0033756.1 mouse_genomes_project 8 104488352 104508790 + Ogfod1 protein_coding processed_transcript MGP_NODShiLtJ_T0089588.1 MGP_NODShiLtJ_G0033756.1 mouse_genomes_project 8 104488380 104518910 + MGP_NODShiLtJ_P0089588 Ogfod1 protein_coding protein_coding MGP_NODShiLtJ_T0089589.1 MGP_NODShiLtJ_G0033756.1 mouse_genomes_project 8 104488385 104507127 + Ogfod1 protein_coding processed_transcript MGP_NODShiLtJ_T0089590.1 MGP_NODShiLtJ_G0033756.1 mouse_genomes_project 8 104506074 104508791 + Ogfod1 protein_coding retained_intron MGP_NODShiLtJ_T0088816.1 MGP_NODShiLtJ_G0033515.1 mouse_genomes_project 8 78763998 78783423 - MGP_NODShiLtJ_P0088816 Kxd1 protein_coding protein_coding MGP_NODShiLtJ_T0088817.1 MGP_NODShiLtJ_G0033515.1 mouse_genomes_project 8 78768949 78778727 - MGP_NODShiLtJ_P0088817 Kxd1 protein_coding protein_coding MGP_NODShiLtJ_T0088818.1 MGP_NODShiLtJ_G0033515.1 mouse_genomes_project 8 78769157 78778826 - MGP_NODShiLtJ_P0088818 Kxd1 protein_coding protein_coding MGP_NODShiLtJ_T0088819.1 MGP_NODShiLtJ_G0033515.1 mouse_genomes_project 8 78769680 78778727 - MGP_NODShiLtJ_P0088819 Kxd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088820.1 MGP_NODShiLtJ_G0033515.1 mouse_genomes_project 8 78770243 78783423 - MGP_NODShiLtJ_P0088820 Kxd1 protein_coding protein_coding MGP_NODShiLtJ_T0088821.1 MGP_NODShiLtJ_G0033515.1 mouse_genomes_project 8 78770949 78778637 - MGP_NODShiLtJ_P0088821 Kxd1 protein_coding protein_coding MGP_NODShiLtJ_T0088822.1 MGP_NODShiLtJ_G0033515.1 mouse_genomes_project 8 78773965 78783250 - MGP_NODShiLtJ_P0088822 Kxd1 protein_coding protein_coding MGP_NODShiLtJ_T0088823.1 MGP_NODShiLtJ_G0033515.1 mouse_genomes_project 8 78774617 78778651 - Kxd1 protein_coding retained_intron MGP_NODShiLtJ_T0009018.1 MGP_NODShiLtJ_G0007246.1 mouse_genomes_project 8 49566540 49577531 - lincRNA lincRNA MGP_NODShiLtJ_T0088890.1 MGP_NODShiLtJ_G0033548.1 mouse_genomes_project 8 79587283 79688877 + MGP_NODShiLtJ_P0088890 Myo9b protein_coding protein_coding MGP_NODShiLtJ_T0088891.1 MGP_NODShiLtJ_G0033548.1 mouse_genomes_project 8 79587283 79688877 + MGP_NODShiLtJ_P0088891 Myo9b protein_coding protein_coding MGP_NODShiLtJ_T0088892.1 MGP_NODShiLtJ_G0033548.1 mouse_genomes_project 8 79587283 79688877 + MGP_NODShiLtJ_P0088892 Myo9b protein_coding protein_coding MGP_NODShiLtJ_T0088893.1 MGP_NODShiLtJ_G0033548.1 mouse_genomes_project 8 79587321 79660314 + MGP_NODShiLtJ_P0088893 Myo9b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088894.1 MGP_NODShiLtJ_G0033548.1 mouse_genomes_project 8 79670583 79692258 + MGP_NODShiLtJ_P0088894 Myo9b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089993.1 MGP_NODShiLtJ_G0033911.1 mouse_genomes_project 8 123056882 123060927 - MGP_NODShiLtJ_P0089993 Hp protein_coding protein_coding MGP_NODShiLtJ_T0005272.1 MGP_NODShiLtJ_G0004466.1 mouse_genomes_project 8 11241611 11258589 - Gm15347 antisense antisense MGP_NODShiLtJ_T0090320.1 MGP_NODShiLtJ_G0034015.1 mouse_genomes_project 8 136204746 136213464 - MGP_NODShiLtJ_P0090320 1700018B08Rik protein_coding protein_coding MGP_NODShiLtJ_T0090321.1 MGP_NODShiLtJ_G0034015.1 mouse_genomes_project 8 136204794 136213379 - MGP_NODShiLtJ_P0090321 1700018B08Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090322.1 MGP_NODShiLtJ_G0034015.1 mouse_genomes_project 8 136204794 136213379 - MGP_NODShiLtJ_P0090322 1700018B08Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090323.1 MGP_NODShiLtJ_G0034015.1 mouse_genomes_project 8 136205778 136215830 - MGP_NODShiLtJ_P0090323 1700018B08Rik protein_coding protein_coding MGP_NODShiLtJ_T0090604.1 MGP_NODShiLtJ_G0034096.1 mouse_genomes_project 8 141349978 141455220 + MGP_NODShiLtJ_P0090604 Slc35f3 protein_coding protein_coding MGP_NODShiLtJ_T0010887.1 MGP_NODShiLtJ_G0009020.1 mouse_genomes_project 8 96530252 96530374 + Gm44348 miRNA miRNA MGP_NODShiLtJ_T0088983.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80055149 80068070 - MGP_NODShiLtJ_P0088983 Fcho1 protein_coding protein_coding MGP_NODShiLtJ_T0088984.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80055156 80072479 - MGP_NODShiLtJ_P0088984 Fcho1 protein_coding protein_coding MGP_NODShiLtJ_T0088985.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80055182 80072429 - Fcho1 protein_coding retained_intron MGP_NODShiLtJ_T0088986.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80055415 80072429 - MGP_NODShiLtJ_P0088986 Fcho1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088987.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80056399 80057869 - Fcho1 protein_coding retained_intron MGP_NODShiLtJ_T0088988.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80056451 80058942 - Fcho1 protein_coding retained_intron MGP_NODShiLtJ_T0088989.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80059304 80062316 - MGP_NODShiLtJ_P0088989 Fcho1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088990.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80061122 80063398 - Fcho1 protein_coding retained_intron MGP_NODShiLtJ_T0088991.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80062529 80072467 - MGP_NODShiLtJ_P0088991 Fcho1 protein_coding protein_coding MGP_NODShiLtJ_T0088992.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80062624 80068628 - Fcho1 protein_coding processed_transcript MGP_NODShiLtJ_T0088993.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80063579 80072410 - Fcho1 protein_coding retained_intron MGP_NODShiLtJ_T0088994.1 MGP_NODShiLtJ_G0033573.1 mouse_genomes_project 8 80063977 80070110 - MGP_NODShiLtJ_P0088994 Fcho1 protein_coding protein_coding MGP_NODShiLtJ_T0090237.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134467726 134521797 + MGP_NODShiLtJ_P0090237 Usp10 protein_coding protein_coding MGP_NODShiLtJ_T0090238.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134468180 134521802 + MGP_NODShiLtJ_P0090238 Usp10 protein_coding protein_coding MGP_NODShiLtJ_T0090239.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134468199 134516869 + Usp10 protein_coding processed_transcript MGP_NODShiLtJ_T0090240.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134468223 134516176 + MGP_NODShiLtJ_P0090240 Usp10 protein_coding protein_coding MGP_NODShiLtJ_T0090241.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134507139 134511780 + Usp10 protein_coding processed_transcript MGP_NODShiLtJ_T0090242.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134511364 134517533 + Usp10 protein_coding retained_intron MGP_NODShiLtJ_T0090243.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134511475 134516645 + Usp10 protein_coding retained_intron MGP_NODShiLtJ_T0090244.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134516204 134519559 + Usp10 protein_coding retained_intron MGP_NODShiLtJ_T0090245.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134516893 134519053 + Usp10 protein_coding retained_intron MGP_NODShiLtJ_T0090246.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134517516 134521111 + MGP_NODShiLtJ_P0090246 Usp10 protein_coding protein_coding MGP_NODShiLtJ_T0090247.1 MGP_NODShiLtJ_G0033999.1 mouse_genomes_project 8 134520447 134521799 + Usp10 protein_coding processed_transcript MGP_NODShiLtJ_T0011620.1 MGP_NODShiLtJ_G0009753.1 mouse_genomes_project 8 138361776 138362057 + Gm22314 misc_RNA misc_RNA MGP_NODShiLtJ_T0010893.1 MGP_NODShiLtJ_G0009026.1 mouse_genomes_project 8 106335987 106336051 - Mir7073 miRNA miRNA MGP_NODShiLtJ_T0099537.1 MGP_NODShiLtJ_G0037931.1 mouse_genomes_project 8 27138865 27138972 - Gm24410 snRNA snRNA MGP_NODShiLtJ_T0015880.1 MGP_NODShiLtJ_G0013988.1 mouse_genomes_project 8 94656573 94656957 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015895.1 MGP_NODShiLtJ_G0014003.1 mouse_genomes_project 8 120237191 120237865 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009007.1 MGP_NODShiLtJ_G0007237.1 mouse_genomes_project 8 34270118 34271389 - 1700104B16Rik lincRNA lincRNA MGP_NODShiLtJ_T0009008.1 MGP_NODShiLtJ_G0007237.1 mouse_genomes_project 8 34270118 34271394 - 1700104B16Rik lincRNA lincRNA MGP_NODShiLtJ_T0098461.1 MGP_NODShiLtJ_G0036861.1 mouse_genomes_project 8 137786885 137789022 + 2810013P06Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0088685.1 MGP_NODShiLtJ_G0033482.1 mouse_genomes_project 8 77979648 77996226 + MGP_NODShiLtJ_P0088685 Atp13a1 protein_coding protein_coding MGP_NODShiLtJ_T0088706.1 MGP_NODShiLtJ_G0033486.1 mouse_genomes_project 8 78072630 78079949 - MGP_NODShiLtJ_P0088706 Cilp2 protein_coding protein_coding MGP_NODShiLtJ_T0089268.1 MGP_NODShiLtJ_G0033669.1 mouse_genomes_project 8 94445213 94446732 - MGP_NODShiLtJ_P0089268 Ier2 protein_coding protein_coding MGP_NODShiLtJ_T0100799.1 MGP_NODShiLtJ_G0039193.1 mouse_genomes_project 8 20782870 20782962 - snoRNA snoRNA MGP_NODShiLtJ_T0089333.1 MGP_NODShiLtJ_G0033682.1 mouse_genomes_project 8 94690518 94697006 - MGP_NODShiLtJ_P0089333 Gcdh protein_coding protein_coding MGP_NODShiLtJ_T0089334.1 MGP_NODShiLtJ_G0033682.1 mouse_genomes_project 8 94694058 94696610 - Gcdh protein_coding retained_intron MGP_NODShiLtJ_T0089335.1 MGP_NODShiLtJ_G0033682.1 mouse_genomes_project 8 94694257 94695992 - Gcdh protein_coding retained_intron MGP_NODShiLtJ_T0089336.1 MGP_NODShiLtJ_G0033682.1 mouse_genomes_project 8 94695976 94696800 - Gcdh protein_coding retained_intron MGP_NODShiLtJ_T0089337.1 MGP_NODShiLtJ_G0033682.1 mouse_genomes_project 8 94696419 94697246 - MGP_NODShiLtJ_P0089337 Gcdh protein_coding protein_coding MGP_NODShiLtJ_T0088316.1 MGP_NODShiLtJ_G0033373.1 mouse_genomes_project 8 45988260 45997951 - MGP_NODShiLtJ_P0088316 Adam26b protein_coding protein_coding MGP_NODShiLtJ_T0010877.1 MGP_NODShiLtJ_G0009010.1 mouse_genomes_project 8 93932494 93932583 - Mir181c miRNA miRNA MGP_NODShiLtJ_T0010891.1 MGP_NODShiLtJ_G0009024.1 mouse_genomes_project 8 104821283 104821354 + Mir138-2 miRNA miRNA MGP_NODShiLtJ_T0088574.1 MGP_NODShiLtJ_G0033444.1 mouse_genomes_project 8 69881505 70455313 + MGP_NODShiLtJ_P0088574 Spock3 protein_coding protein_coding MGP_NODShiLtJ_T0088575.1 MGP_NODShiLtJ_G0033444.1 mouse_genomes_project 8 69881857 70138323 + Spock3 protein_coding retained_intron MGP_NODShiLtJ_T0088576.1 MGP_NODShiLtJ_G0033444.1 mouse_genomes_project 8 69882421 69899253 + Spock3 protein_coding processed_transcript MGP_NODShiLtJ_T0009116.1 MGP_NODShiLtJ_G0007317.1 mouse_genomes_project 8 136337166 136337630 + Gm27030 lincRNA lincRNA MGP_NODShiLtJ_T0011610.1 MGP_NODShiLtJ_G0009743.1 mouse_genomes_project 8 89265019 89265194 + Gm27820 misc_RNA misc_RNA MGP_NODShiLtJ_T0002290.1 MGP_NODShiLtJ_G0002200.1 mouse_genomes_project 8 122148539 122153747 + TEC TEC MGP_NODShiLtJ_T0089613.1 MGP_NODShiLtJ_G0033766.1 mouse_genomes_project 8 105051041 105090801 + MGP_NODShiLtJ_P0089613 Cpne2 protein_coding protein_coding MGP_NODShiLtJ_T0089614.1 MGP_NODShiLtJ_G0033766.1 mouse_genomes_project 8 105051090 105067999 + Cpne2 protein_coding retained_intron MGP_NODShiLtJ_T0089615.1 MGP_NODShiLtJ_G0033766.1 mouse_genomes_project 8 105051118 105068995 + Cpne2 protein_coding processed_transcript MGP_NODShiLtJ_T0089616.1 MGP_NODShiLtJ_G0033766.1 mouse_genomes_project 8 105051118 105090662 + MGP_NODShiLtJ_P0089616 Cpne2 protein_coding protein_coding MGP_NODShiLtJ_T0089617.1 MGP_NODShiLtJ_G0033766.1 mouse_genomes_project 8 105082924 105090387 + Cpne2 protein_coding retained_intron MGP_NODShiLtJ_T0088751.1 MGP_NODShiLtJ_G0033501.1 mouse_genomes_project 8 78438099 78456056 - MGP_NODShiLtJ_P0088751 Armc6 protein_coding protein_coding MGP_NODShiLtJ_T0088752.1 MGP_NODShiLtJ_G0033501.1 mouse_genomes_project 8 78438125 78440717 - Armc6 protein_coding retained_intron MGP_NODShiLtJ_T0088753.1 MGP_NODShiLtJ_G0033501.1 mouse_genomes_project 8 78438404 78440218 - Armc6 protein_coding retained_intron MGP_NODShiLtJ_T0088754.1 MGP_NODShiLtJ_G0033501.1 mouse_genomes_project 8 78441113 78443105 - Armc6 protein_coding retained_intron MGP_NODShiLtJ_T0088755.1 MGP_NODShiLtJ_G0033501.1 mouse_genomes_project 8 78442537 78456039 - Armc6 protein_coding retained_intron MGP_NODShiLtJ_T0088756.1 MGP_NODShiLtJ_G0033501.1 mouse_genomes_project 8 78443245 78454451 - MGP_NODShiLtJ_P0088756 Armc6 protein_coding protein_coding MGP_NODShiLtJ_T0090290.1 MGP_NODShiLtJ_G0034009.1 mouse_genomes_project 8 135284498 135290445 + MGP_NODShiLtJ_P0090290 Cox4i1 protein_coding protein_coding MGP_NODShiLtJ_T0090291.1 MGP_NODShiLtJ_G0034009.1 mouse_genomes_project 8 135284504 135286053 + Cox4i1 protein_coding retained_intron MGP_NODShiLtJ_T0090292.1 MGP_NODShiLtJ_G0034009.1 mouse_genomes_project 8 135284579 135290277 + MGP_NODShiLtJ_P0090292 Cox4i1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090293.1 MGP_NODShiLtJ_G0034009.1 mouse_genomes_project 8 135288821 135290345 + Cox4i1 protein_coding retained_intron MGP_NODShiLtJ_T0090294.1 MGP_NODShiLtJ_G0034009.1 mouse_genomes_project 8 135289383 135290439 + Cox4i1 protein_coding retained_intron MGP_NODShiLtJ_T0088620.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75629772 75965643 - MGP_NODShiLtJ_P0088620 Psd3 protein_coding protein_coding MGP_NODShiLtJ_T0088621.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75629772 75965643 - MGP_NODShiLtJ_P0088621 Psd3 protein_coding protein_coding MGP_NODShiLtJ_T0088622.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75629779 75771934 - MGP_NODShiLtJ_P0088622 Psd3 protein_coding protein_coding MGP_NODShiLtJ_T0088623.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75636750 75965643 - MGP_NODShiLtJ_P0088623 Psd3 protein_coding protein_coding MGP_NODShiLtJ_T0088624.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75637584 75899251 - MGP_NODShiLtJ_P0088624 Psd3 protein_coding protein_coding MGP_NODShiLtJ_T0088625.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75652228 75771872 - MGP_NODShiLtJ_P0088625 Psd3 protein_coding protein_coding MGP_NODShiLtJ_T0088626.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75743777 76059151 - Psd3 protein_coding retained_intron MGP_NODShiLtJ_T0088627.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75860152 75890830 - Psd3 protein_coding processed_transcript MGP_NODShiLtJ_T0088628.1 MGP_NODShiLtJ_G0033464.1 mouse_genomes_project 8 75890357 75942232 - Psd3 protein_coding retained_intron MGP_NODShiLtJ_T0089544.1 MGP_NODShiLtJ_G0033743.1 mouse_genomes_project 8 103353995 103396077 + MGP_NODShiLtJ_P0089544 Slc6a2 protein_coding protein_coding MGP_NODShiLtJ_T0089545.1 MGP_NODShiLtJ_G0033743.1 mouse_genomes_project 8 103354963 103398823 + MGP_NODShiLtJ_P0089545 Slc6a2 protein_coding protein_coding MGP_NODShiLtJ_T0087918.1 MGP_NODShiLtJ_G0033220.1 mouse_genomes_project 8 18072907 18074597 + MGP_NODShiLtJ_P0087918 Spag11a protein_coding protein_coding MGP_NODShiLtJ_T0087786.1 MGP_NODShiLtJ_G0033173.1 mouse_genomes_project 8 11447946 11461518 + MGP_NODShiLtJ_P0087786 Proz protein_coding protein_coding MGP_NODShiLtJ_T0090528.1 MGP_NODShiLtJ_G0034071.1 mouse_genomes_project 8 138879703 138906238 - MGP_NODShiLtJ_P0090528 Taf5l protein_coding protein_coding MGP_NODShiLtJ_T0009081.1 MGP_NODShiLtJ_G0007291.1 mouse_genomes_project 8 104184713 104247752 - Gm26843 lincRNA lincRNA MGP_NODShiLtJ_T0100837.1 MGP_NODShiLtJ_G0039231.1 mouse_genomes_project 8 106328896 106329032 - Gm26493 snoRNA snoRNA MGP_NODShiLtJ_T0089505.1 MGP_NODShiLtJ_G0033731.1 mouse_genomes_project 8 100446996 100551750 - MGP_NODShiLtJ_P0089505 Tox3 protein_coding protein_coding MGP_NODShiLtJ_T0089506.1 MGP_NODShiLtJ_G0033731.1 mouse_genomes_project 8 100452680 100551572 - MGP_NODShiLtJ_P0089506 Tox3 protein_coding protein_coding MGP_NODShiLtJ_T0089507.1 MGP_NODShiLtJ_G0033731.1 mouse_genomes_project 8 100457466 100551567 - MGP_NODShiLtJ_P0089507 Tox3 protein_coding protein_coding MGP_NODShiLtJ_T0088613.1 MGP_NODShiLtJ_G0033458.1 mouse_genomes_project 8 74454015 74461870 - MGP_NODShiLtJ_P0088613 Npy5r protein_coding protein_coding MGP_NODShiLtJ_T0088503.1 MGP_NODShiLtJ_G0033426.1 mouse_genomes_project 8 62946547 62950082 + MGP_NODShiLtJ_P0088503 Hand2 protein_coding protein_coding MGP_NODShiLtJ_T0087914.1 MGP_NODShiLtJ_G0033217.1 mouse_genomes_project 8 18028411 18032099 - MGP_NODShiLtJ_P0087914 Defb12 protein_coding protein_coding MGP_NODShiLtJ_T0090576.1 MGP_NODShiLtJ_G0034088.1 mouse_genomes_project 8 139984289 140002611 + MGP_NODShiLtJ_P0090576 Tsnax protein_coding unknown_likely_coding MGP_NODShiLtJ_T0005321.1 MGP_NODShiLtJ_G0004505.1 mouse_genomes_project 8 117010718 117018595 - Gm10631 antisense antisense MGP_NODShiLtJ_T0099544.1 MGP_NODShiLtJ_G0037938.1 mouse_genomes_project 8 49060560 49060657 + Gm24669 snRNA snRNA MGP_NODShiLtJ_T0089818.1 MGP_NODShiLtJ_G0033844.1 mouse_genomes_project 8 118357748 118378990 - MGP_NODShiLtJ_P0089818 Fhod1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089819.1 MGP_NODShiLtJ_G0033844.1 mouse_genomes_project 8 118357752 118379046 - Fhod1 protein_coding retained_intron MGP_NODShiLtJ_T0089820.1 MGP_NODShiLtJ_G0033844.1 mouse_genomes_project 8 118357752 118379090 - MGP_NODShiLtJ_P0089820 Fhod1 protein_coding protein_coding MGP_NODShiLtJ_T0089821.1 MGP_NODShiLtJ_G0033844.1 mouse_genomes_project 8 118359529 118360156 - Fhod1 protein_coding retained_intron MGP_NODShiLtJ_T0089822.1 MGP_NODShiLtJ_G0033844.1 mouse_genomes_project 8 118367374 118368729 - Fhod1 protein_coding retained_intron MGP_NODShiLtJ_T0089208.1 MGP_NODShiLtJ_G0033647.1 mouse_genomes_project 8 93667403 93689492 - MGP_NODShiLtJ_P0089208 Gm10644 protein_coding protein_coding MGP_NODShiLtJ_T0089501.1 MGP_NODShiLtJ_G0033728.1 mouse_genomes_project 8 98773196 98833459 + MGP_NODShiLtJ_P0089501 Cyld protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089502.1 MGP_NODShiLtJ_G0033728.1 mouse_genomes_project 8 98781445 98833455 + MGP_NODShiLtJ_P0089502 Cyld protein_coding protein_coding MGP_NODShiLtJ_T0008999.1 MGP_NODShiLtJ_G0007231.1 mouse_genomes_project 8 26791618 26798527 + lincRNA lincRNA MGP_NODShiLtJ_T0089786.1 MGP_NODShiLtJ_G0033832.1 mouse_genomes_project 8 118246927 118275600 + MGP_NODShiLtJ_P0089786 D230025D16Rik protein_coding protein_coding MGP_NODShiLtJ_T0089787.1 MGP_NODShiLtJ_G0033832.1 mouse_genomes_project 8 118246988 118273672 + D230025D16Rik protein_coding retained_intron MGP_NODShiLtJ_T0089788.1 MGP_NODShiLtJ_G0033832.1 mouse_genomes_project 8 118246988 118275303 + MGP_NODShiLtJ_P0089788 D230025D16Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089789.1 MGP_NODShiLtJ_G0033832.1 mouse_genomes_project 8 118247049 118275600 + MGP_NODShiLtJ_P0089789 D230025D16Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089790.1 MGP_NODShiLtJ_G0033832.1 mouse_genomes_project 8 118252735 118261777 + MGP_NODShiLtJ_P0089790 D230025D16Rik protein_coding protein_coding MGP_NODShiLtJ_T0089791.1 MGP_NODShiLtJ_G0033832.1 mouse_genomes_project 8 118269039 118274312 + D230025D16Rik protein_coding retained_intron MGP_NODShiLtJ_T0089756.1 MGP_NODShiLtJ_G0033818.1 mouse_genomes_project 8 117514591 117524845 - MGP_NODShiLtJ_P0089756 Cdh16 protein_coding protein_coding MGP_NODShiLtJ_T0088448.1 MGP_NODShiLtJ_G0033409.1 mouse_genomes_project 8 50777873 50956466 - MGP_NODShiLtJ_P0088448 Wwc2 protein_coding protein_coding MGP_NODShiLtJ_T0089523.1 MGP_NODShiLtJ_G0033735.1 mouse_genomes_project 8 101528140 101628691 - MGP_NODShiLtJ_P0089523 Rpgrip1l protein_coding protein_coding MGP_NODShiLtJ_T0089524.1 MGP_NODShiLtJ_G0033735.1 mouse_genomes_project 8 101530054 101628652 - MGP_NODShiLtJ_P0089524 Rpgrip1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089525.1 MGP_NODShiLtJ_G0033735.1 mouse_genomes_project 8 101583341 101590406 - Rpgrip1l protein_coding retained_intron MGP_NODShiLtJ_T0089526.1 MGP_NODShiLtJ_G0033735.1 mouse_genomes_project 8 101623404 101626473 - MGP_NODShiLtJ_P0089526 Rpgrip1l protein_coding protein_coding MGP_NODShiLtJ_T0087978.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21836991 21885868 - MGP_NODShiLtJ_P0087978 Ikbkb protein_coding protein_coding MGP_NODShiLtJ_T0087979.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21836992 21885830 - MGP_NODShiLtJ_P0087979 Ikbkb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087980.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21836992 21885824 - MGP_NODShiLtJ_P0087980 Ikbkb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087981.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21837547 21885879 - MGP_NODShiLtJ_P0087981 Ikbkb protein_coding protein_coding MGP_NODShiLtJ_T0087982.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21837887 21839262 - MGP_NODShiLtJ_P0087982 Ikbkb protein_coding protein_coding MGP_NODShiLtJ_T0087983.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21838136 21885868 - Ikbkb protein_coding retained_intron MGP_NODShiLtJ_T0087984.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21845790 21846806 - Ikbkb protein_coding retained_intron MGP_NODShiLtJ_T0087985.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21853764 21885830 - Ikbkb protein_coding retained_intron MGP_NODShiLtJ_T0087986.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21858992 21885829 - Ikbkb protein_coding retained_intron MGP_NODShiLtJ_T0087987.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21860537 21871768 - MGP_NODShiLtJ_P0087987 Ikbkb protein_coding protein_coding MGP_NODShiLtJ_T0087988.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21866833 21885849 - Ikbkb protein_coding retained_intron MGP_NODShiLtJ_T0087989.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21869542 21885864 - Ikbkb protein_coding retained_intron MGP_NODShiLtJ_T0087990.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21881301 21885853 - Ikbkb protein_coding retained_intron MGP_NODShiLtJ_T0087991.1 MGP_NODShiLtJ_G0033264.1 mouse_genomes_project 8 21881745 21885815 - Ikbkb protein_coding processed_transcript MGP_NODShiLtJ_T0089546.1 MGP_NODShiLtJ_G0033744.1 mouse_genomes_project 8 103417534 103444277 - MGP_NODShiLtJ_P0089546 Ces1a protein_coding protein_coding MGP_NODShiLtJ_T0010896.1 MGP_NODShiLtJ_G0009029.1 mouse_genomes_project 8 117629621 117629696 - Gm44328 miRNA miRNA MGP_NODShiLtJ_T0089378.1 MGP_NODShiLtJ_G0033693.1 mouse_genomes_project 8 94853289 94856736 + MGP_NODShiLtJ_P0089378 2310036O22Rik protein_coding protein_coding MGP_NODShiLtJ_T0089860.1 MGP_NODShiLtJ_G0033859.1 mouse_genomes_project 8 118765295 118770416 - MGP_NODShiLtJ_P0089860 Enkd1 protein_coding protein_coding MGP_NODShiLtJ_T0090188.1 MGP_NODShiLtJ_G0033977.1 mouse_genomes_project 8 131577311 131808770 + MGP_NODShiLtJ_P0090188 Cmip protein_coding protein_coding MGP_NODShiLtJ_T0090189.1 MGP_NODShiLtJ_G0033977.1 mouse_genomes_project 8 131693153 131808770 + MGP_NODShiLtJ_P0090189 Cmip protein_coding protein_coding MGP_NODShiLtJ_T0089889.1 MGP_NODShiLtJ_G0033875.1 mouse_genomes_project 8 119081240 119087977 - MGP_NODShiLtJ_P0089889 Dpep2 protein_coding protein_coding MGP_NODShiLtJ_T0089890.1 MGP_NODShiLtJ_G0033875.1 mouse_genomes_project 8 119081241 119092696 - MGP_NODShiLtJ_P0089890 Dpep2 protein_coding protein_coding MGP_NODShiLtJ_T0089891.1 MGP_NODShiLtJ_G0033875.1 mouse_genomes_project 8 119081246 119087987 - MGP_NODShiLtJ_P0089891 Dpep2 protein_coding protein_coding MGP_NODShiLtJ_T0089892.1 MGP_NODShiLtJ_G0033875.1 mouse_genomes_project 8 119084043 119087950 - Dpep2 protein_coding retained_intron MGP_NODShiLtJ_T0089893.1 MGP_NODShiLtJ_G0033875.1 mouse_genomes_project 8 119084795 119087978 - Dpep2 protein_coding retained_intron MGP_NODShiLtJ_T0087992.1 MGP_NODShiLtJ_G0033265.1 mouse_genomes_project 8 21934930 21964913 + MGP_NODShiLtJ_P0087992 Plat protein_coding protein_coding MGP_NODShiLtJ_T0100843.1 MGP_NODShiLtJ_G0039237.1 mouse_genomes_project 8 123352359 123352444 + Snord71 snoRNA snoRNA MGP_NODShiLtJ_T0090131.1 MGP_NODShiLtJ_G0033956.1 mouse_genomes_project 8 125769743 125790466 - MGP_NODShiLtJ_P0090131 Kars protein_coding protein_coding MGP_NODShiLtJ_T0090132.1 MGP_NODShiLtJ_G0033956.1 mouse_genomes_project 8 125769747 125790501 - MGP_NODShiLtJ_P0090132 Kars protein_coding protein_coding MGP_NODShiLtJ_T0090133.1 MGP_NODShiLtJ_G0033956.1 mouse_genomes_project 8 125769747 125790444 - MGP_NODShiLtJ_P0090133 Kars protein_coding protein_coding MGP_NODShiLtJ_T0089963.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120549674 120605368 + Nfat5 protein_coding retained_intron MGP_NODShiLtJ_T0089964.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120549674 120662787 + MGP_NODShiLtJ_P0089964 Nfat5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089965.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120549674 120654774 + MGP_NODShiLtJ_P0089965 Nfat5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089966.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120549674 120662786 + MGP_NODShiLtJ_P0089966 Nfat5 protein_coding protein_coding MGP_NODShiLtJ_T0089967.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120549713 120653206 + MGP_NODShiLtJ_P0089967 Nfat5 protein_coding protein_coding MGP_NODShiLtJ_T0089968.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120549763 120654725 + MGP_NODShiLtJ_P0089968 Nfat5 protein_coding protein_coding MGP_NODShiLtJ_T0089969.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120549763 120662778 + MGP_NODShiLtJ_P0089969 Nfat5 protein_coding protein_coding MGP_NODShiLtJ_T0089970.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120550030 120655596 + MGP_NODShiLtJ_P0089970 Nfat5 protein_coding protein_coding MGP_NODShiLtJ_T0089971.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120615920 120636109 + Nfat5 protein_coding retained_intron MGP_NODShiLtJ_T0089972.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120615920 120649952 + Nfat5 protein_coding retained_intron MGP_NODShiLtJ_T0089973.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120616325 120653206 + MGP_NODShiLtJ_P0089973 Nfat5 protein_coding protein_coding MGP_NODShiLtJ_T0089974.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120623789 120644316 + MGP_NODShiLtJ_P0089974 Nfat5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089975.1 MGP_NODShiLtJ_G0033902.1 mouse_genomes_project 8 120636188 120656983 + MGP_NODShiLtJ_P0089975 Nfat5 protein_coding protein_coding MGP_NODShiLtJ_T0088060.1 MGP_NODShiLtJ_G0033285.1 mouse_genomes_project 8 24404547 24420080 - MGP_NODShiLtJ_P0088060 Htra4 protein_coding protein_coding MGP_NODShiLtJ_T0088061.1 MGP_NODShiLtJ_G0033285.1 mouse_genomes_project 8 24408758 24418448 - Htra4 protein_coding retained_intron MGP_NODShiLtJ_T0010876.1 MGP_NODShiLtJ_G0009009.1 mouse_genomes_project 8 93932337 93932409 - Mir181d miRNA miRNA MGP_NODShiLtJ_T0088026.1 MGP_NODShiLtJ_G0033276.1 mouse_genomes_project 8 23775509 23777314 - MGP_NODShiLtJ_P0088026 1810011O10Rik protein_coding protein_coding MGP_NODShiLtJ_T0005264.1 MGP_NODShiLtJ_G0004459.1 mouse_genomes_project 8 190247 191185 + Gm16180 antisense antisense MGP_NODShiLtJ_T0005270.1 MGP_NODShiLtJ_G0004465.1 mouse_genomes_project 8 11208635 11214165 - Gm15350 antisense antisense MGP_NODShiLtJ_T0005271.1 MGP_NODShiLtJ_G0004465.1 mouse_genomes_project 8 11208635 11212220 - Gm15350 antisense antisense MGP_NODShiLtJ_T0090637.1 MGP_NODShiLtJ_G0034104.1 mouse_genomes_project 8 143918014 143969030 + MGP_NODShiLtJ_P0090637 Itgb1 protein_coding protein_coding MGP_NODShiLtJ_T0090638.1 MGP_NODShiLtJ_G0034104.1 mouse_genomes_project 8 143918117 143968447 + MGP_NODShiLtJ_P0090638 Itgb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090639.1 MGP_NODShiLtJ_G0034104.1 mouse_genomes_project 8 143918230 143945284 + Itgb1 protein_coding retained_intron MGP_NODShiLtJ_T0090640.1 MGP_NODShiLtJ_G0034104.1 mouse_genomes_project 8 143958851 143968219 + MGP_NODShiLtJ_P0090640 Itgb1 protein_coding protein_coding MGP_NODShiLtJ_T0090099.1 MGP_NODShiLtJ_G0033944.1 mouse_genomes_project 8 125106387 125202626 - MGP_NODShiLtJ_P0090099 Wdr59 protein_coding protein_coding MGP_NODShiLtJ_T0090100.1 MGP_NODShiLtJ_G0033944.1 mouse_genomes_project 8 125106393 125202500 - MGP_NODShiLtJ_P0090100 Wdr59 protein_coding protein_coding MGP_NODShiLtJ_T0090090.1 MGP_NODShiLtJ_G0033941.1 mouse_genomes_project 8 124910784 124947927 - MGP_NODShiLtJ_P0090090 Rfwd3 protein_coding protein_coding MGP_NODShiLtJ_T0100840.1 MGP_NODShiLtJ_G0039234.1 mouse_genomes_project 8 106951984 106952116 - Gm22780 snoRNA snoRNA MGP_NODShiLtJ_T0005295.1 MGP_NODShiLtJ_G0004482.1 mouse_genomes_project 8 47648061 47653279 - Gm2366 antisense antisense MGP_NODShiLtJ_T0087993.1 MGP_NODShiLtJ_G0033266.1 mouse_genomes_project 8 21970612 21992270 - MGP_NODShiLtJ_P0087993 Ap3m2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100809.1 MGP_NODShiLtJ_G0039203.1 mouse_genomes_project 8 45760634 45760764 + Gm22986 snoRNA snoRNA MGP_NODShiLtJ_T0088616.1 MGP_NODShiLtJ_G0033461.1 mouse_genomes_project 8 75416740 75418087 + MGP_NODShiLtJ_P0088616 Nat1 protein_coding protein_coding MGP_NODShiLtJ_T0090135.1 MGP_NODShiLtJ_G0033958.1 mouse_genomes_project 8 126405047 126744985 + Cntnap4 protein_coding retained_intron MGP_NODShiLtJ_T0090136.1 MGP_NODShiLtJ_G0033958.1 mouse_genomes_project 8 126405047 126768932 + MGP_NODShiLtJ_P0090136 Cntnap4 protein_coding protein_coding MGP_NODShiLtJ_T0090137.1 MGP_NODShiLtJ_G0033958.1 mouse_genomes_project 8 126405047 126768920 + MGP_NODShiLtJ_P0090137 Cntnap4 protein_coding protein_coding MGP_NODShiLtJ_T0090138.1 MGP_NODShiLtJ_G0033958.1 mouse_genomes_project 8 126405059 126652140 + Cntnap4 protein_coding retained_intron MGP_NODShiLtJ_T0090139.1 MGP_NODShiLtJ_G0033958.1 mouse_genomes_project 8 126576937 126579031 + Cntnap4 protein_coding processed_transcript MGP_NODShiLtJ_T0090140.1 MGP_NODShiLtJ_G0033958.1 mouse_genomes_project 8 126628139 126656631 + Cntnap4 protein_coding processed_transcript MGP_NODShiLtJ_T0010885.1 MGP_NODShiLtJ_G0009018.1 mouse_genomes_project 8 94947975 94948031 - Gm23388 miRNA miRNA MGP_NODShiLtJ_T0088182.1 MGP_NODShiLtJ_G0033332.1 mouse_genomes_project 8 34187773 34214629 + Gsr protein_coding processed_transcript MGP_NODShiLtJ_T0088183.1 MGP_NODShiLtJ_G0033332.1 mouse_genomes_project 8 34192908 34238376 + MGP_NODShiLtJ_P0088183 Gsr protein_coding protein_coding MGP_NODShiLtJ_T0088184.1 MGP_NODShiLtJ_G0033332.1 mouse_genomes_project 8 34209630 34225883 + Gsr protein_coding processed_transcript MGP_NODShiLtJ_T0089259.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94159004 94298000 + Cacna1a protein_coding retained_intron MGP_NODShiLtJ_T0089260.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94186421 94425247 + MGP_NODShiLtJ_P0089260 Cacna1a protein_coding protein_coding MGP_NODShiLtJ_T0089261.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94186434 94425063 + MGP_NODShiLtJ_P0089261 Cacna1a protein_coding protein_coding MGP_NODShiLtJ_T0089262.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94325931 94332856 + Cacna1a protein_coding processed_transcript MGP_NODShiLtJ_T0089263.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94353043 94363321 + Cacna1a protein_coding retained_intron MGP_NODShiLtJ_T0089264.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94384858 94395517 + Cacna1a protein_coding retained_intron MGP_NODShiLtJ_T0089265.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94384871 94396479 + Cacna1a protein_coding retained_intron MGP_NODShiLtJ_T0089266.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94384897 94417939 + Cacna1a protein_coding retained_intron MGP_NODShiLtJ_T0089267.1 MGP_NODShiLtJ_G0033668.1 mouse_genomes_project 8 94385400 94401343 + Cacna1a protein_coding processed_transcript MGP_NODShiLtJ_T0087920.1 MGP_NODShiLtJ_G0033222.1 mouse_genomes_project 8 18119914 18120283 + MGP_NODShiLtJ_P0087920 Defb4 protein_coding protein_coding MGP_NODShiLtJ_T0089866.1 MGP_NODShiLtJ_G0033863.1 mouse_genomes_project 8 118912381 118934417 + MGP_NODShiLtJ_P0089866 Tsnaxip1 protein_coding protein_coding MGP_NODShiLtJ_T0090411.1 MGP_NODShiLtJ_G0034034.1 mouse_genomes_project 8 137283784 137288898 + MGP_NODShiLtJ_P0090411 Cdt1 protein_coding protein_coding MGP_NODShiLtJ_T0100818.1 MGP_NODShiLtJ_G0039212.1 mouse_genomes_project 8 69690342 69690456 + Gm22324 snoRNA snoRNA MGP_NODShiLtJ_T0089727.1 MGP_NODShiLtJ_G0033805.1 mouse_genomes_project 8 117065742 117088691 - MGP_NODShiLtJ_P0089727 Tk2 protein_coding protein_coding MGP_NODShiLtJ_T0090016.1 MGP_NODShiLtJ_G0033918.1 mouse_genomes_project 8 123382950 123425850 + Phlpp2 protein_coding retained_intron MGP_NODShiLtJ_T0090017.1 MGP_NODShiLtJ_G0033918.1 mouse_genomes_project 8 123383027 123469044 + MGP_NODShiLtJ_P0090017 Phlpp2 protein_coding protein_coding MGP_NODShiLtJ_T0087881.1 MGP_NODShiLtJ_G0033206.1 mouse_genomes_project 8 13611767 13616155 - MGP_NODShiLtJ_P0087881 BB014433 protein_coding protein_coding MGP_NODShiLtJ_T0087882.1 MGP_NODShiLtJ_G0033206.1 mouse_genomes_project 8 13612489 13616164 - MGP_NODShiLtJ_P0087882 BB014433 protein_coding protein_coding MGP_NODShiLtJ_T0009112.1 MGP_NODShiLtJ_G0007314.1 mouse_genomes_project 8 136088031 136096496 + Gm26747 lincRNA lincRNA MGP_NODShiLtJ_T0090462.1 MGP_NODShiLtJ_G0034051.1 mouse_genomes_project 8 138020693 138028661 + MGP_NODShiLtJ_P0090462 Cdk10 protein_coding protein_coding MGP_NODShiLtJ_T0088757.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78455891 78489897 + MGP_NODShiLtJ_P0088757 Sugp2 protein_coding protein_coding MGP_NODShiLtJ_T0088758.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78456206 78464452 + MGP_NODShiLtJ_P0088758 Sugp2 protein_coding protein_coding MGP_NODShiLtJ_T0088759.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78456212 78478939 + Sugp2 protein_coding retained_intron MGP_NODShiLtJ_T0088760.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78457945 78464704 + MGP_NODShiLtJ_P0088760 Sugp2 protein_coding protein_coding MGP_NODShiLtJ_T0088761.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78465384 78482446 + Sugp2 protein_coding retained_intron MGP_NODShiLtJ_T0088762.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78472319 78476044 + Sugp2 protein_coding retained_intron MGP_NODShiLtJ_T0088763.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78476239 78504082 + Sugp2 protein_coding processed_transcript MGP_NODShiLtJ_T0088764.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78481651 78483579 + Sugp2 protein_coding retained_intron MGP_NODShiLtJ_T0088765.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78483927 78487281 + Sugp2 protein_coding processed_transcript MGP_NODShiLtJ_T0088766.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78484617 78487281 + Sugp2 protein_coding retained_intron MGP_NODShiLtJ_T0088767.1 MGP_NODShiLtJ_G0033502.1 mouse_genomes_project 8 78497758 78504081 + Sugp2 protein_coding processed_transcript MGP_NODShiLtJ_T0009063.1 MGP_NODShiLtJ_G0007281.1 mouse_genomes_project 8 97493656 97494839 - 1700120C18Rik lincRNA lincRNA MGP_NODShiLtJ_T0087943.1 MGP_NODShiLtJ_G0033244.1 mouse_genomes_project 8 21031150 21035768 - MGP_NODShiLtJ_P0087943 Defb15 protein_coding protein_coding MGP_NODShiLtJ_T0089649.1 MGP_NODShiLtJ_G0033776.1 mouse_genomes_project 8 105390784 105400024 + MGP_NODShiLtJ_P0089649 Polr2c protein_coding protein_coding MGP_NODShiLtJ_T0089424.1 MGP_NODShiLtJ_G0033708.1 mouse_genomes_project 8 95348497 95382794 + MGP_NODShiLtJ_P0089424 Gpt2 protein_coding protein_coding MGP_NODShiLtJ_T0089425.1 MGP_NODShiLtJ_G0033708.1 mouse_genomes_project 8 95348528 95380068 + MGP_NODShiLtJ_P0089425 Gpt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089426.1 MGP_NODShiLtJ_G0033708.1 mouse_genomes_project 8 95348530 95349229 + Gpt2 protein_coding processed_transcript MGP_NODShiLtJ_T0089427.1 MGP_NODShiLtJ_G0033708.1 mouse_genomes_project 8 95371212 95376728 + Gpt2 protein_coding retained_intron MGP_NODShiLtJ_T0089428.1 MGP_NODShiLtJ_G0033708.1 mouse_genomes_project 8 95374642 95380914 + Gpt2 protein_coding processed_transcript MGP_NODShiLtJ_T0089758.1 MGP_NODShiLtJ_G0033820.1 mouse_genomes_project 8 117544130 117546257 - MGP_NODShiLtJ_P0089758 Fam96b protein_coding protein_coding MGP_NODShiLtJ_T0089759.1 MGP_NODShiLtJ_G0033820.1 mouse_genomes_project 8 117544132 117545991 - Fam96b protein_coding retained_intron MGP_NODShiLtJ_T0089760.1 MGP_NODShiLtJ_G0033820.1 mouse_genomes_project 8 117544139 117545993 - MGP_NODShiLtJ_P0089760 Fam96b protein_coding protein_coding MGP_NODShiLtJ_T0090324.1 MGP_NODShiLtJ_G0034016.1 mouse_genomes_project 8 136220955 136250090 - MGP_NODShiLtJ_P0090324 Fbxo31 protein_coding protein_coding MGP_NODShiLtJ_T0090325.1 MGP_NODShiLtJ_G0034016.1 mouse_genomes_project 8 136225516 136230391 - Fbxo31 protein_coding processed_transcript MGP_NODShiLtJ_T0090326.1 MGP_NODShiLtJ_G0034016.1 mouse_genomes_project 8 136227140 136231256 - Fbxo31 protein_coding retained_intron MGP_NODShiLtJ_T0090327.1 MGP_NODShiLtJ_G0034016.1 mouse_genomes_project 8 136235623 136250074 - MGP_NODShiLtJ_P0090327 Fbxo31 protein_coding protein_coding MGP_NODShiLtJ_T0088611.1 MGP_NODShiLtJ_G0033457.1 mouse_genomes_project 8 74279904 74281923 + MGP_NODShiLtJ_P0088611 Tktl2 protein_coding protein_coding MGP_NODShiLtJ_T0088612.1 MGP_NODShiLtJ_G0033457.1 mouse_genomes_project 8 74279907 74286463 + MGP_NODShiLtJ_P0088612 Tktl2 protein_coding protein_coding MGP_NODShiLtJ_T0087942.1 MGP_NODShiLtJ_G0033243.1 mouse_genomes_project 8 21004061 21005041 - MGP_NODShiLtJ_P0087942 Defb11 protein_coding protein_coding MGP_NODShiLtJ_T0090641.1 MGP_NODShiLtJ_G0034105.1 mouse_genomes_project 8 143983310 144028194 - MGP_NODShiLtJ_P0090641 Gm3952 protein_coding protein_coding MGP_NODShiLtJ_T0087924.1 MGP_NODShiLtJ_G0033226.1 mouse_genomes_project 8 18499511 18499724 - MGP_NODShiLtJ_P0087924 Defb8 protein_coding protein_coding MGP_NODShiLtJ_T0089736.1 MGP_NODShiLtJ_G0033812.1 mouse_genomes_project 8 117225714 117277064 - MGP_NODShiLtJ_P0089736 Cmtm4 protein_coding protein_coding MGP_NODShiLtJ_T0090196.1 MGP_NODShiLtJ_G0033982.1 mouse_genomes_project 8 132714440 133814599 + MGP_NODShiLtJ_P0090196 Cdh13 protein_coding protein_coding MGP_NODShiLtJ_T0090197.1 MGP_NODShiLtJ_G0033982.1 mouse_genomes_project 8 132714462 133307570 + Cdh13 protein_coding retained_intron MGP_NODShiLtJ_T0090198.1 MGP_NODShiLtJ_G0033982.1 mouse_genomes_project 8 132714482 133434431 + Cdh13 protein_coding retained_intron MGP_NODShiLtJ_T0090199.1 MGP_NODShiLtJ_G0033982.1 mouse_genomes_project 8 132714503 133208531 + Cdh13 protein_coding retained_intron MGP_NODShiLtJ_T0090200.1 MGP_NODShiLtJ_G0033982.1 mouse_genomes_project 8 132714504 133682694 + Cdh13 protein_coding retained_intron MGP_NODShiLtJ_T0090201.1 MGP_NODShiLtJ_G0033982.1 mouse_genomes_project 8 132746167 133311206 + Cdh13 protein_coding processed_transcript MGP_NODShiLtJ_T0090202.1 MGP_NODShiLtJ_G0033982.1 mouse_genomes_project 8 133762422 133803035 + Cdh13 protein_coding processed_transcript MGP_NODShiLtJ_T0015899.1 MGP_NODShiLtJ_G0014007.1 mouse_genomes_project 8 138724383 138724750 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009089.1 MGP_NODShiLtJ_G0007296.1 mouse_genomes_project 8 118180724 118186508 + Gm3830 lincRNA lincRNA MGP_NODShiLtJ_T0090498.1 MGP_NODShiLtJ_G0034058.1 mouse_genomes_project 8 138216613 138221619 + MGP_NODShiLtJ_P0090498 Mc1r protein_coding protein_coding MGP_NODShiLtJ_T0087690.1 MGP_NODShiLtJ_G0033143.1 mouse_genomes_project 8 2249931 2270633 - MGP_NODShiLtJ_P0087690 Slc10a2 protein_coding protein_coding MGP_NODShiLtJ_T0088467.1 MGP_NODShiLtJ_G0033413.1 mouse_genomes_project 8 58190127 58202053 + MGP_NODShiLtJ_P0088467 Aga protein_coding protein_coding MGP_NODShiLtJ_T0089912.1 MGP_NODShiLtJ_G0033880.1 mouse_genomes_project 8 119273954 119288904 + MGP_NODShiLtJ_P0089912 Pla2g15 protein_coding protein_coding MGP_NODShiLtJ_T0009065.1 MGP_NODShiLtJ_G0007283.1 mouse_genomes_project 8 98213772 98214247 + 9430002A10Rik lincRNA lincRNA MGP_NODShiLtJ_T0009066.1 MGP_NODShiLtJ_G0007283.1 mouse_genomes_project 8 98213772 98214241 + 9430002A10Rik lincRNA lincRNA MGP_NODShiLtJ_T0088489.1 MGP_NODShiLtJ_G0033421.1 mouse_genomes_project 8 61171684 61212085 - MGP_NODShiLtJ_P0088489 Adam29 protein_coding protein_coding MGP_NODShiLtJ_T0090573.1 MGP_NODShiLtJ_G0034085.1 mouse_genomes_project 8 139845261 139852662 - MGP_NODShiLtJ_P0090573 Exoc8 protein_coding protein_coding MGP_NODShiLtJ_T0089729.1 MGP_NODShiLtJ_G0033807.1 mouse_genomes_project 8 117128573 117157682 - MGP_NODShiLtJ_P0089729 Cmtm2a protein_coding protein_coding MGP_NODShiLtJ_T0010916.1 MGP_NODShiLtJ_G0009049.1 mouse_genomes_project 8 135738355 135738453 - Gm27530 miRNA miRNA MGP_NODShiLtJ_T0088456.1 MGP_NODShiLtJ_G0033411.1 mouse_genomes_project 8 51223638 51371968 - MGP_NODShiLtJ_P0088456 Tenm3 protein_coding protein_coding MGP_NODShiLtJ_T0088457.1 MGP_NODShiLtJ_G0033411.1 mouse_genomes_project 8 51223638 51890883 - MGP_NODShiLtJ_P0088457 Tenm3 protein_coding protein_coding MGP_NODShiLtJ_T0088458.1 MGP_NODShiLtJ_G0033411.1 mouse_genomes_project 8 51223661 51703021 - MGP_NODShiLtJ_P0088458 Tenm3 protein_coding protein_coding MGP_NODShiLtJ_T0088459.1 MGP_NODShiLtJ_G0033411.1 mouse_genomes_project 8 51279077 51303245 - Tenm3 protein_coding processed_transcript MGP_NODShiLtJ_T0088460.1 MGP_NODShiLtJ_G0033411.1 mouse_genomes_project 8 51339749 51575494 - MGP_NODShiLtJ_P0088460 Tenm3 protein_coding protein_coding MGP_NODShiLtJ_T0088461.1 MGP_NODShiLtJ_G0033411.1 mouse_genomes_project 8 51402560 51575840 - MGP_NODShiLtJ_P0088461 Tenm3 protein_coding protein_coding MGP_NODShiLtJ_T0088462.1 MGP_NODShiLtJ_G0033411.1 mouse_genomes_project 8 51402560 51575647 - MGP_NODShiLtJ_P0088462 Tenm3 protein_coding protein_coding MGP_NODShiLtJ_T0088867.1 MGP_NODShiLtJ_G0033535.1 mouse_genomes_project 8 79121377 79138566 - MGP_NODShiLtJ_P0088867 Kcnn1 protein_coding protein_coding MGP_NODShiLtJ_T0088868.1 MGP_NODShiLtJ_G0033535.1 mouse_genomes_project 8 79121377 79138566 - MGP_NODShiLtJ_P0088868 Kcnn1 protein_coding protein_coding MGP_NODShiLtJ_T0088869.1 MGP_NODShiLtJ_G0033535.1 mouse_genomes_project 8 79122484 79138533 - MGP_NODShiLtJ_P0088869 Kcnn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088221.1 MGP_NODShiLtJ_G0033342.1 mouse_genomes_project 8 35482376 35626789 - MGP_NODShiLtJ_P0088221 Tnks protein_coding protein_coding MGP_NODShiLtJ_T0087838.1 MGP_NODShiLtJ_G0033190.1 mouse_genomes_project 8 12238131 12250973 + MGP_NODShiLtJ_P0087838 Upf3a protein_coding protein_coding MGP_NODShiLtJ_T0087645.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1277921 1287058 + MGP_NODShiLtJ_P0087645 Map2k7 protein_coding protein_coding MGP_NODShiLtJ_T0087646.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1277948 1284990 + MGP_NODShiLtJ_P0087646 Map2k7 protein_coding protein_coding MGP_NODShiLtJ_T0087647.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1277989 1287058 + MGP_NODShiLtJ_P0087647 Map2k7 protein_coding protein_coding MGP_NODShiLtJ_T0087648.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1277989 1287058 + MGP_NODShiLtJ_P0087648 Map2k7 protein_coding protein_coding MGP_NODShiLtJ_T0087649.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1278025 1290584 + MGP_NODShiLtJ_P0087649 Map2k7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087650.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1279265 1287058 + MGP_NODShiLtJ_P0087650 Map2k7 protein_coding protein_coding MGP_NODShiLtJ_T0087651.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1282424 1285002 + MGP_NODShiLtJ_P0087651 Map2k7 protein_coding protein_coding MGP_NODShiLtJ_T0087652.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1283617 1285338 + Map2k7 protein_coding processed_transcript MGP_NODShiLtJ_T0087653.1 MGP_NODShiLtJ_G0033132.1 mouse_genomes_project 8 1283797 1285461 + Map2k7 protein_coding retained_intron MGP_NODShiLtJ_T0090116.1 MGP_NODShiLtJ_G0033946.1 mouse_genomes_project 8 125347222 125352025 - Ldhd protein_coding retained_intron MGP_NODShiLtJ_T0090117.1 MGP_NODShiLtJ_G0033946.1 mouse_genomes_project 8 125348940 125353773 - Ldhd protein_coding retained_intron MGP_NODShiLtJ_T0090118.1 MGP_NODShiLtJ_G0033946.1 mouse_genomes_project 8 125349708 125353812 - MGP_NODShiLtJ_P0090118 Ldhd protein_coding protein_coding MGP_NODShiLtJ_T0089939.1 MGP_NODShiLtJ_G0033892.1 mouse_genomes_project 8 120074234 120109907 + MGP_NODShiLtJ_P0089939 Cirh1a protein_coding protein_coding MGP_NODShiLtJ_T0089564.1 MGP_NODShiLtJ_G0033750.1 mouse_genomes_project 8 103708229 103750637 - MGP_NODShiLtJ_P0089564 Ces1g protein_coding protein_coding MGP_NODShiLtJ_T0088492.1 MGP_NODShiLtJ_G0033423.1 mouse_genomes_project 8 61752045 61780734 + MGP_NODShiLtJ_P0088492 Hpgd protein_coding protein_coding MGP_NODShiLtJ_T0100792.1 MGP_NODShiLtJ_G0039186.1 mouse_genomes_project 8 12773545 12773676 - Gm26184 snoRNA snoRNA MGP_NODShiLtJ_T0009070.1 MGP_NODShiLtJ_G0007286.1 mouse_genomes_project 8 102252588 102258088 - Gm28515 lincRNA lincRNA MGP_NODShiLtJ_T0018327.1 MGP_NODShiLtJ_G0015590.1 mouse_genomes_project 8 119258547 119261248 + 1810019D21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018328.1 MGP_NODShiLtJ_G0015590.1 mouse_genomes_project 8 119258582 119261039 + 1810019D21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018329.1 MGP_NODShiLtJ_G0015590.1 mouse_genomes_project 8 119260212 119261673 + 1810019D21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0087915.1 MGP_NODShiLtJ_G0033218.1 mouse_genomes_project 8 18038090 18040880 + MGP_NODShiLtJ_P0087915 Defb34 protein_coding protein_coding MGP_NODShiLtJ_T0100851.1 MGP_NODShiLtJ_G0039245.1 mouse_genomes_project 8 136349713 136349792 - Gm23299 snoRNA snoRNA MGP_NODShiLtJ_T0005352.1 MGP_NODShiLtJ_G0004532.1 mouse_genomes_project 8 141643461 141668432 + Gm26759 antisense antisense MGP_NODShiLtJ_T0088684.1 MGP_NODShiLtJ_G0033481.1 mouse_genomes_project 8 77958064 77967298 - MGP_NODShiLtJ_P0088684 Zfp866 protein_coding protein_coding MGP_NODShiLtJ_T0088877.1 MGP_NODShiLtJ_G0033542.1 mouse_genomes_project 8 79443895 79478959 + MGP_NODShiLtJ_P0088877 protein_coding protein_coding MGP_NODShiLtJ_T0002287.1 MGP_NODShiLtJ_G0002197.1 mouse_genomes_project 8 111706962 111708979 + TEC TEC MGP_NODShiLtJ_T0100826.1 MGP_NODShiLtJ_G0039220.1 mouse_genomes_project 8 79185908 79186039 - Snora68 snoRNA snoRNA MGP_NODShiLtJ_T0010853.1 MGP_NODShiLtJ_G0008986.1 mouse_genomes_project 8 34747944 34748035 - Mir6395 miRNA miRNA MGP_NODShiLtJ_T0018284.1 MGP_NODShiLtJ_G0015572.1 mouse_genomes_project 8 11045345 11046648 + 4931415C17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018285.1 MGP_NODShiLtJ_G0015572.1 mouse_genomes_project 8 11045586 11052374 + 4931415C17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0010847.1 MGP_NODShiLtJ_G0008980.1 mouse_genomes_project 8 14806097 14806179 - Mir3106 miRNA miRNA MGP_NODShiLtJ_T0089460.1 MGP_NODShiLtJ_G0033718.1 mouse_genomes_project 8 97562949 97591441 + MGP_NODShiLtJ_P0089460 4933402J07Rik protein_coding protein_coding MGP_NODShiLtJ_T0005334.1 MGP_NODShiLtJ_G0004515.1 mouse_genomes_project 8 128370632 128381998 - 4933408N05Rik antisense antisense MGP_NODShiLtJ_T0088313.1 MGP_NODShiLtJ_G0033370.1 mouse_genomes_project 8 45493154 45506218 - MGP_NODShiLtJ_P0088313 Triml1 protein_coding protein_coding MGP_NODShiLtJ_T0100842.1 MGP_NODShiLtJ_G0039236.1 mouse_genomes_project 8 119084797 119084928 - Gm22972 snoRNA snoRNA MGP_NODShiLtJ_T0009122.1 MGP_NODShiLtJ_G0007321.1 mouse_genomes_project 8 138031501 138040392 + 4933417D19Rik lincRNA lincRNA MGP_NODShiLtJ_T0090232.1 MGP_NODShiLtJ_G0033995.1 mouse_genomes_project 8 134242958 134306213 + MGP_NODShiLtJ_P0090232 Atp2c2 protein_coding protein_coding MGP_NODShiLtJ_T0089339.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94714940 94717850 + MGP_NODShiLtJ_P0089339 Dnase2a protein_coding protein_coding MGP_NODShiLtJ_T0089340.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94714940 94718089 + MGP_NODShiLtJ_P0089340 Dnase2a protein_coding protein_coding MGP_NODShiLtJ_T0089341.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94715027 94715581 + Dnase2a protein_coding retained_intron MGP_NODShiLtJ_T0089342.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94715027 94715849 + Dnase2a protein_coding retained_intron MGP_NODShiLtJ_T0089343.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94715070 94716306 + MGP_NODShiLtJ_P0089343 Dnase2a protein_coding protein_coding MGP_NODShiLtJ_T0089344.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94715101 94720851 + Dnase2a protein_coding processed_transcript MGP_NODShiLtJ_T0089345.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94715111 94716345 + MGP_NODShiLtJ_P0089345 Dnase2a protein_coding protein_coding MGP_NODShiLtJ_T0089346.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94716215 94717842 + Dnase2a protein_coding processed_transcript MGP_NODShiLtJ_T0089350.1 MGP_NODShiLtJ_G0033684.1 mouse_genomes_project 8 94719771 94729892 + Dnase2a protein_coding processed_transcript MGP_NODShiLtJ_T0088431.1 MGP_NODShiLtJ_G0033402.1 mouse_genomes_project 8 50375214 50420705 - MGP_NODShiLtJ_P0088431 Trappc11 protein_coding protein_coding MGP_NODShiLtJ_T0088432.1 MGP_NODShiLtJ_G0033402.1 mouse_genomes_project 8 50375227 50411280 - Trappc11 protein_coding retained_intron MGP_NODShiLtJ_T0088433.1 MGP_NODShiLtJ_G0033402.1 mouse_genomes_project 8 50375228 50420708 - Trappc11 protein_coding retained_intron MGP_NODShiLtJ_T0088434.1 MGP_NODShiLtJ_G0033402.1 mouse_genomes_project 8 50389284 50396388 - MGP_NODShiLtJ_P0088434 Trappc11 protein_coding protein_coding MGP_NODShiLtJ_T0088435.1 MGP_NODShiLtJ_G0033402.1 mouse_genomes_project 8 50410919 50414293 - Trappc11 protein_coding retained_intron MGP_NODShiLtJ_T0011616.1 MGP_NODShiLtJ_G0009749.1 mouse_genomes_project 8 119176220 119178058 - Gm27956 misc_RNA misc_RNA MGP_NODShiLtJ_T0090151.1 MGP_NODShiLtJ_G0033963.1 mouse_genomes_project 8 128214861 128241827 + Vat1l protein_coding processed_transcript MGP_NODShiLtJ_T0090152.1 MGP_NODShiLtJ_G0033963.1 mouse_genomes_project 8 128214879 128404593 + MGP_NODShiLtJ_P0090152 Vat1l protein_coding protein_coding MGP_NODShiLtJ_T0090153.1 MGP_NODShiLtJ_G0033963.1 mouse_genomes_project 8 128214883 128241821 + MGP_NODShiLtJ_P0090153 Vat1l protein_coding protein_coding MGP_NODShiLtJ_T0090154.1 MGP_NODShiLtJ_G0033963.1 mouse_genomes_project 8 128398637 128404592 + Vat1l protein_coding retained_intron MGP_NODShiLtJ_T0100823.1 MGP_NODShiLtJ_G0039217.1 mouse_genomes_project 8 75165672 75165822 - Gm24677 snoRNA snoRNA MGP_NODShiLtJ_T0089221.1 MGP_NODShiLtJ_G0033652.1 mouse_genomes_project 8 93750658 93752595 - MGP_NODShiLtJ_P0089221 2210011C24Rik protein_coding protein_coding MGP_NODShiLtJ_T0089222.1 MGP_NODShiLtJ_G0033652.1 mouse_genomes_project 8 93750675 93751848 - MGP_NODShiLtJ_P0089222 2210011C24Rik protein_coding protein_coding MGP_NODShiLtJ_T0089223.1 MGP_NODShiLtJ_G0033652.1 mouse_genomes_project 8 93751203 93751848 - MGP_NODShiLtJ_P0089223 2210011C24Rik protein_coding protein_coding MGP_NODShiLtJ_T0089224.1 MGP_NODShiLtJ_G0033652.1 mouse_genomes_project 8 93751880 93752608 - MGP_NODShiLtJ_P0089224 2210011C24Rik protein_coding protein_coding MGP_NODShiLtJ_T0089225.1 MGP_NODShiLtJ_G0033652.1 mouse_genomes_project 8 93751888 93752593 - MGP_NODShiLtJ_P0089225 2210011C24Rik protein_coding protein_coding MGP_NODShiLtJ_T0099579.1 MGP_NODShiLtJ_G0037973.1 mouse_genomes_project 8 139268718 139268804 + Gm24459 snRNA snRNA MGP_NODShiLtJ_T0015844.1 MGP_NODShiLtJ_G0013952.1 mouse_genomes_project 8 31498971 31499437 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010855.1 MGP_NODShiLtJ_G0008988.1 mouse_genomes_project 8 39549495 39549565 - Mir383 miRNA miRNA MGP_NODShiLtJ_T0097836.1 MGP_NODShiLtJ_G0036248.1 mouse_genomes_project 8 88944363 88945863 - pseudogene pseudogene MGP_NODShiLtJ_T0010902.1 MGP_NODShiLtJ_G0009035.1 mouse_genomes_project 8 120845948 120846018 + Mir140 miRNA miRNA MGP_NODShiLtJ_T0015833.1 MGP_NODShiLtJ_G0013941.1 mouse_genomes_project 8 18567930 18568450 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088193.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34327951 34343553 - MGP_NODShiLtJ_P0088193 Rbpms protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088194.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34328512 34489833 - MGP_NODShiLtJ_P0088194 Rbpms protein_coding protein_coding MGP_NODShiLtJ_T0088195.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34328513 34489821 - MGP_NODShiLtJ_P0088195 Rbpms protein_coding protein_coding MGP_NODShiLtJ_T0088196.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34328516 34489786 - MGP_NODShiLtJ_P0088196 Rbpms protein_coding protein_coding MGP_NODShiLtJ_T0088197.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34329652 34489796 - MGP_NODShiLtJ_P0088197 Rbpms protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088198.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34329923 34394110 - MGP_NODShiLtJ_P0088198 Rbpms protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088199.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34329932 34353446 - MGP_NODShiLtJ_P0088199 Rbpms protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088200.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34329935 34353409 - MGP_NODShiLtJ_P0088200 Rbpms protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088201.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34329937 34405448 - Rbpms protein_coding processed_transcript MGP_NODShiLtJ_T0088202.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34329943 34343884 - Rbpms protein_coding retained_intron MGP_NODShiLtJ_T0088203.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34350551 34489785 - MGP_NODShiLtJ_P0088203 Rbpms protein_coding protein_coding MGP_NODShiLtJ_T0088204.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34353351 34392870 - MGP_NODShiLtJ_P0088204 Rbpms protein_coding protein_coding MGP_NODShiLtJ_T0088205.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34353373 34445635 - MGP_NODShiLtJ_P0088205 Rbpms protein_coding protein_coding MGP_NODShiLtJ_T0088206.1 MGP_NODShiLtJ_G0033335.1 mouse_genomes_project 8 34416949 34447637 - Rbpms protein_coding processed_transcript MGP_NODShiLtJ_T0098457.1 MGP_NODShiLtJ_G0036857.1 mouse_genomes_project 8 95891488 95893886 + Hm629797 sense_intronic sense_intronic MGP_NODShiLtJ_T0009001.1 MGP_NODShiLtJ_G0007233.1 mouse_genomes_project 8 28505634 28507723 + Gm26795 lincRNA lincRNA MGP_NODShiLtJ_T0009002.1 MGP_NODShiLtJ_G0007233.1 mouse_genomes_project 8 28505661 28506438 + Gm26795 lincRNA lincRNA MGP_NODShiLtJ_T0097834.1 MGP_NODShiLtJ_G0036246.1 mouse_genomes_project 8 35626153 35627308 + pseudogene pseudogene MGP_NODShiLtJ_T0015831.1 MGP_NODShiLtJ_G0013939.1 mouse_genomes_project 8 17942679 17946920 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010878.1 MGP_NODShiLtJ_G0009011.1 mouse_genomes_project 8 93962619 93962694 + Mir23a miRNA miRNA MGP_NODShiLtJ_T0100828.1 MGP_NODShiLtJ_G0039222.1 mouse_genomes_project 8 84922983 84923110 - Gm22544 snoRNA snoRNA MGP_NODShiLtJ_T0090076.1 MGP_NODShiLtJ_G0033938.1 mouse_genomes_project 8 124678683 124706799 - MGP_NODShiLtJ_P0090076 Clec18a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090077.1 MGP_NODShiLtJ_G0033938.1 mouse_genomes_project 8 124678683 124706799 - MGP_NODShiLtJ_P0090077 Clec18a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090078.1 MGP_NODShiLtJ_G0033938.1 mouse_genomes_project 8 124678683 124706799 - MGP_NODShiLtJ_P0090078 Clec18a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090079.1 MGP_NODShiLtJ_G0033938.1 mouse_genomes_project 8 124691070 124706352 - MGP_NODShiLtJ_P0090079 Clec18a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090080.1 MGP_NODShiLtJ_G0033938.1 mouse_genomes_project 8 124691077 124706799 - MGP_NODShiLtJ_P0090080 Clec18a protein_coding protein_coding MGP_NODShiLtJ_T0090081.1 MGP_NODShiLtJ_G0033938.1 mouse_genomes_project 8 124691077 124706573 - MGP_NODShiLtJ_P0090081 Clec18a protein_coding protein_coding MGP_NODShiLtJ_T0090082.1 MGP_NODShiLtJ_G0033938.1 mouse_genomes_project 8 124691078 124706799 - MGP_NODShiLtJ_P0090082 Clec18a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090083.1 MGP_NODShiLtJ_G0033938.1 mouse_genomes_project 8 124691078 124718491 - MGP_NODShiLtJ_P0090083 Clec18a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089847.1 MGP_NODShiLtJ_G0033854.1 mouse_genomes_project 8 118657791 118678839 + MGP_NODShiLtJ_P0089847 Fam65a protein_coding protein_coding MGP_NODShiLtJ_T0089087.1 MGP_NODShiLtJ_G0033606.1 mouse_genomes_project 8 86306532 86593569 - MGP_NODShiLtJ_P0089087 Arhgap10 protein_coding protein_coding MGP_NODShiLtJ_T0087657.1 MGP_NODShiLtJ_G0033134.1 mouse_genomes_project 8 1292262 1295380 + MGP_NODShiLtJ_P0087657 Snapc2 protein_coding protein_coding MGP_NODShiLtJ_T0009011.1 MGP_NODShiLtJ_G0007239.1 mouse_genomes_project 8 34658251 34666815 + lincRNA lincRNA MGP_NODShiLtJ_T0089248.1 MGP_NODShiLtJ_G0033666.1 mouse_genomes_project 8 94009962 94017377 - MGP_NODShiLtJ_P0089248 Mri1 protein_coding protein_coding MGP_NODShiLtJ_T0089249.1 MGP_NODShiLtJ_G0033666.1 mouse_genomes_project 8 94011077 94016466 - MGP_NODShiLtJ_P0089249 Mri1 protein_coding protein_coding MGP_NODShiLtJ_T0089250.1 MGP_NODShiLtJ_G0033666.1 mouse_genomes_project 8 94013971 94017300 - MGP_NODShiLtJ_P0089250 Mri1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089251.1 MGP_NODShiLtJ_G0033666.1 mouse_genomes_project 8 94014285 94017379 - Mri1 protein_coding processed_transcript MGP_NODShiLtJ_T0089252.1 MGP_NODShiLtJ_G0033666.1 mouse_genomes_project 8 94015842 94017379 - Mri1 protein_coding retained_intron MGP_NODShiLtJ_T0089057.1 MGP_NODShiLtJ_G0033597.1 mouse_genomes_project 8 81293304 81831697 - MGP_NODShiLtJ_P0089057 Large protein_coding protein_coding MGP_NODShiLtJ_T0089058.1 MGP_NODShiLtJ_G0033597.1 mouse_genomes_project 8 81293304 81830713 - MGP_NODShiLtJ_P0089058 Large protein_coding protein_coding MGP_NODShiLtJ_T0089059.1 MGP_NODShiLtJ_G0033597.1 mouse_genomes_project 8 81504924 81562240 - Large protein_coding retained_intron MGP_NODShiLtJ_T0088220.1 MGP_NODShiLtJ_G0033341.1 mouse_genomes_project 8 35459743 35472292 + MGP_NODShiLtJ_P0088220 Dusp4 protein_coding protein_coding MGP_NODShiLtJ_T0088222.1 MGP_NODShiLtJ_G0033343.1 mouse_genomes_project 8 36083239 36096950 + MGP_NODShiLtJ_P0088222 Ppp1r3b protein_coding protein_coding MGP_NODShiLtJ_T0099551.1 MGP_NODShiLtJ_G0037945.1 mouse_genomes_project 8 75086134 75086258 - Gm24274 snRNA snRNA MGP_NODShiLtJ_T0089457.1 MGP_NODShiLtJ_G0033716.1 mouse_genomes_project 8 96802576 96847393 - MGP_NODShiLtJ_P0089457 N4bp1 protein_coding protein_coding MGP_NODShiLtJ_T0089799.1 MGP_NODShiLtJ_G0033835.1 mouse_genomes_project 8 118289361 118294040 + MGP_NODShiLtJ_P0089799 Fbxl8 protein_coding protein_coding MGP_NODShiLtJ_T0089800.1 MGP_NODShiLtJ_G0033835.1 mouse_genomes_project 8 118289395 118293884 + MGP_NODShiLtJ_P0089800 Fbxl8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087710.1 MGP_NODShiLtJ_G0033156.1 mouse_genomes_project 8 9694671 9726204 - MGP_NODShiLtJ_P0087710 Rab20 protein_coding protein_coding MGP_NODShiLtJ_T0102219.1 MGP_NODShiLtJ_G0040385.1 mouse_genomes_project 8 211 2301 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0088572.1 MGP_NODShiLtJ_G0033443.1 mouse_genomes_project 8 68771761 68846846 - MGP_NODShiLtJ_P0088572 Anxa10 protein_coding protein_coding MGP_NODShiLtJ_T0088573.1 MGP_NODShiLtJ_G0033443.1 mouse_genomes_project 8 68772240 68846852 - MGP_NODShiLtJ_P0088573 Anxa10 protein_coding protein_coding MGP_NODShiLtJ_T0089755.1 MGP_NODShiLtJ_G0033817.1 mouse_genomes_project 8 117492051 117497409 + MGP_NODShiLtJ_P0089755 Pdp2 protein_coding protein_coding MGP_NODShiLtJ_T0088133.1 MGP_NODShiLtJ_G0033305.1 mouse_genomes_project 8 26607428 26611602 + MGP_NODShiLtJ_P0088133 Zfp703 protein_coding protein_coding MGP_NODShiLtJ_T0088134.1 MGP_NODShiLtJ_G0033305.1 mouse_genomes_project 8 26607428 26611602 + MGP_NODShiLtJ_P0088134 Zfp703 protein_coding protein_coding MGP_NODShiLtJ_T0009049.1 MGP_NODShiLtJ_G0007274.1 mouse_genomes_project 8 97143715 97177765 - Gm10637 lincRNA lincRNA MGP_NODShiLtJ_T0009050.1 MGP_NODShiLtJ_G0007274.1 mouse_genomes_project 8 97173017 97177776 - Gm10637 lincRNA lincRNA MGP_NODShiLtJ_T0102222.1 MGP_NODShiLtJ_G0040388.1 mouse_genomes_project 8 18230602 18239626 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009000.1 MGP_NODShiLtJ_G0007232.1 mouse_genomes_project 8 27362326 27381294 + Gm1698 lincRNA lincRNA MGP_NODShiLtJ_T0015827.1 MGP_NODShiLtJ_G0013935.1 mouse_genomes_project 8 11473250 11474172 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090606.1 MGP_NODShiLtJ_G0034098.1 mouse_genomes_project 8 141488068 141541810 - MGP_NODShiLtJ_P0090606 Tarbp1 protein_coding protein_coding MGP_NODShiLtJ_T0087846.1 MGP_NODShiLtJ_G0033197.1 mouse_genomes_project 8 12389346 12428913 + MGP_NODShiLtJ_P0087846 Fbxo25 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087847.1 MGP_NODShiLtJ_G0033197.1 mouse_genomes_project 8 12389374 12426102 + MGP_NODShiLtJ_P0087847 Fbxo25 protein_coding protein_coding MGP_NODShiLtJ_T0088463.1 MGP_NODShiLtJ_G0033412.1 mouse_genomes_project 8 52492194 52499933 + protein_coding processed_transcript MGP_NODShiLtJ_T0088464.1 MGP_NODShiLtJ_G0033412.1 mouse_genomes_project 8 52492221 52645567 + MGP_NODShiLtJ_P0088464 protein_coding protein_coding MGP_NODShiLtJ_T0088465.1 MGP_NODShiLtJ_G0033412.1 mouse_genomes_project 8 52600595 52645567 + MGP_NODShiLtJ_P0088465 protein_coding protein_coding MGP_NODShiLtJ_T0088466.1 MGP_NODShiLtJ_G0033412.1 mouse_genomes_project 8 52626768 52671698 + protein_coding processed_transcript MGP_NODShiLtJ_T0009053.1 MGP_NODShiLtJ_G0007277.1 mouse_genomes_project 8 97451132 97452124 + 4930535O05Rik lincRNA lincRNA MGP_NODShiLtJ_T0089217.1 MGP_NODShiLtJ_G0033651.1 mouse_genomes_project 8 93740588 93743911 + MGP_NODShiLtJ_P0089217 1700067K01Rik protein_coding protein_coding MGP_NODShiLtJ_T0089218.1 MGP_NODShiLtJ_G0033651.1 mouse_genomes_project 8 93740790 93743810 + MGP_NODShiLtJ_P0089218 1700067K01Rik protein_coding protein_coding MGP_NODShiLtJ_T0089219.1 MGP_NODShiLtJ_G0033651.1 mouse_genomes_project 8 93740790 93743804 + MGP_NODShiLtJ_P0089219 1700067K01Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089220.1 MGP_NODShiLtJ_G0033651.1 mouse_genomes_project 8 93741431 93742391 + 1700067K01Rik protein_coding retained_intron MGP_NODShiLtJ_T0090392.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137186882 137193740 + MGP_NODShiLtJ_P0090392 Ctu2 protein_coding protein_coding MGP_NODShiLtJ_T0090393.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137186948 137194786 + MGP_NODShiLtJ_P0090393 Ctu2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090394.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137186952 137192389 + Ctu2 protein_coding retained_intron MGP_NODShiLtJ_T0090395.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137186952 137188952 + MGP_NODShiLtJ_P0090395 Ctu2 protein_coding protein_coding MGP_NODShiLtJ_T0090396.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137186959 137190082 + MGP_NODShiLtJ_P0090396 Ctu2 protein_coding protein_coding MGP_NODShiLtJ_T0090397.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137186982 137189687 + Ctu2 protein_coding retained_intron MGP_NODShiLtJ_T0090398.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137187431 137188984 + Ctu2 protein_coding retained_intron MGP_NODShiLtJ_T0090399.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137191569 137192388 + Ctu2 protein_coding retained_intron MGP_NODShiLtJ_T0090400.1 MGP_NODShiLtJ_G0034032.1 mouse_genomes_project 8 137191604 137192392 + MGP_NODShiLtJ_P0090400 Ctu2 protein_coding protein_coding MGP_NODShiLtJ_T0090550.1 MGP_NODShiLtJ_G0034078.1 mouse_genomes_project 8 139564327 139595919 - MGP_NODShiLtJ_P0090550 2310022B05Rik protein_coding protein_coding MGP_NODShiLtJ_T0088335.1 MGP_NODShiLtJ_G0033382.1 mouse_genomes_project 8 48063039 48079148 - MGP_NODShiLtJ_P0088335 Tlr3 protein_coding protein_coding MGP_NODShiLtJ_T0088336.1 MGP_NODShiLtJ_G0033382.1 mouse_genomes_project 8 48063285 48079217 - MGP_NODShiLtJ_P0088336 Tlr3 protein_coding protein_coding MGP_NODShiLtJ_T0088815.1 MGP_NODShiLtJ_G0033514.1 mouse_genomes_project 8 78763978 78765494 - MGP_NODShiLtJ_P0088815 protein_coding protein_coding MGP_NODShiLtJ_T0100853.1 MGP_NODShiLtJ_G0039247.1 mouse_genomes_project 8 138289439 138289553 + Gm25428 snoRNA snoRNA MGP_NODShiLtJ_T0100846.1 MGP_NODShiLtJ_G0039240.1 mouse_genomes_project 8 124518177 124518325 + Gm26132 snoRNA snoRNA MGP_NODShiLtJ_T0088949.1 MGP_NODShiLtJ_G0033562.1 mouse_genomes_project 8 79883013 79888040 + MGP_NODShiLtJ_P0088949 Mvb12a protein_coding protein_coding MGP_NODShiLtJ_T0099562.1 MGP_NODShiLtJ_G0037956.1 mouse_genomes_project 8 102390473 102390577 + Gm24254 snRNA snRNA MGP_NODShiLtJ_T0097843.1 MGP_NODShiLtJ_G0036255.1 mouse_genomes_project 8 135781709 135782799 + pseudogene pseudogene MGP_NODShiLtJ_T0090146.1 MGP_NODShiLtJ_G0033962.1 mouse_genomes_project 8 128135878 128157343 + MGP_NODShiLtJ_P0090146 Nudt7 protein_coding protein_coding MGP_NODShiLtJ_T0090147.1 MGP_NODShiLtJ_G0033962.1 mouse_genomes_project 8 128135895 128154906 + MGP_NODShiLtJ_P0090147 Nudt7 protein_coding protein_coding MGP_NODShiLtJ_T0090148.1 MGP_NODShiLtJ_G0033962.1 mouse_genomes_project 8 128135939 128154916 + MGP_NODShiLtJ_P0090148 Nudt7 protein_coding protein_coding MGP_NODShiLtJ_T0090149.1 MGP_NODShiLtJ_G0033962.1 mouse_genomes_project 8 128135962 128154910 + MGP_NODShiLtJ_P0090149 Nudt7 protein_coding protein_coding MGP_NODShiLtJ_T0090150.1 MGP_NODShiLtJ_G0033962.1 mouse_genomes_project 8 128135963 128151026 + MGP_NODShiLtJ_P0090150 Nudt7 protein_coding protein_coding MGP_NODShiLtJ_T0090388.1 MGP_NODShiLtJ_G0034030.1 mouse_genomes_project 8 137162742 137169249 - MGP_NODShiLtJ_P0090388 Snai3 protein_coding protein_coding MGP_NODShiLtJ_T0088776.1 MGP_NODShiLtJ_G0033504.1 mouse_genomes_project 8 78520137 78532511 - MGP_NODShiLtJ_P0088776 Ddx49 protein_coding protein_coding MGP_NODShiLtJ_T0088777.1 MGP_NODShiLtJ_G0033504.1 mouse_genomes_project 8 78520148 78532474 - Ddx49 protein_coding retained_intron MGP_NODShiLtJ_T0088778.1 MGP_NODShiLtJ_G0033504.1 mouse_genomes_project 8 78520857 78523009 - Ddx49 protein_coding retained_intron MGP_NODShiLtJ_T0088779.1 MGP_NODShiLtJ_G0033504.1 mouse_genomes_project 8 78522069 78532501 - MGP_NODShiLtJ_P0088779 Ddx49 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088780.1 MGP_NODShiLtJ_G0033504.1 mouse_genomes_project 8 78523091 78532485 - Ddx49 protein_coding retained_intron MGP_NODShiLtJ_T0088781.1 MGP_NODShiLtJ_G0033504.1 mouse_genomes_project 8 78528766 78532456 - Ddx49 protein_coding retained_intron MGP_NODShiLtJ_T0005337.1 MGP_NODShiLtJ_G0004518.1 mouse_genomes_project 8 128761415 128770993 - Gm16118 antisense antisense MGP_NODShiLtJ_T0090134.1 MGP_NODShiLtJ_G0033957.1 mouse_genomes_project 8 125790536 125800414 + MGP_NODShiLtJ_P0090134 Terf2ip protein_coding protein_coding MGP_NODShiLtJ_T0090603.1 MGP_NODShiLtJ_G0034095.1 mouse_genomes_project 8 141029083 141067711 + MGP_NODShiLtJ_P0090603 Kcnk1 protein_coding protein_coding MGP_NODShiLtJ_T0089651.1 MGP_NODShiLtJ_G0033778.1 mouse_genomes_project 8 105441647 105456866 - MGP_NODShiLtJ_P0089651 Ccdc102a protein_coding protein_coding MGP_NODShiLtJ_T0089652.1 MGP_NODShiLtJ_G0033778.1 mouse_genomes_project 8 105452335 105456290 - MGP_NODShiLtJ_P0089652 Ccdc102a protein_coding protein_coding MGP_NODShiLtJ_T0087949.1 MGP_NODShiLtJ_G0033249.1 mouse_genomes_project 8 21100202 21173747 - MGP_NODShiLtJ_P0087949 Atp7b protein_coding protein_coding MGP_NODShiLtJ_T0087950.1 MGP_NODShiLtJ_G0033249.1 mouse_genomes_project 8 21102064 21173461 - MGP_NODShiLtJ_P0087950 Atp7b protein_coding protein_coding MGP_NODShiLtJ_T0090575.1 MGP_NODShiLtJ_G0034087.1 mouse_genomes_project 8 139863720 139906574 - MGP_NODShiLtJ_P0090575 Egln1 protein_coding protein_coding MGP_NODShiLtJ_T0100795.1 MGP_NODShiLtJ_G0039189.1 mouse_genomes_project 8 17130862 17130972 - Gm25665 snoRNA snoRNA MGP_NODShiLtJ_T0088068.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24939811 24984520 + MGP_NODShiLtJ_P0088068 Fgfr1 protein_coding protein_coding MGP_NODShiLtJ_T0088069.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24944931 25005362 + MGP_NODShiLtJ_P0088069 Fgfr1 protein_coding protein_coding MGP_NODShiLtJ_T0088070.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24944931 25005362 + MGP_NODShiLtJ_P0088070 Fgfr1 protein_coding protein_coding MGP_NODShiLtJ_T0088071.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24944951 25005362 + MGP_NODShiLtJ_P0088071 Fgfr1 protein_coding protein_coding MGP_NODShiLtJ_T0088072.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24944954 25004428 + MGP_NODShiLtJ_P0088072 Fgfr1 protein_coding protein_coding MGP_NODShiLtJ_T0088073.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24944972 25003917 + MGP_NODShiLtJ_P0088073 Fgfr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088074.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24945054 24984610 + Fgfr1 protein_coding processed_transcript MGP_NODShiLtJ_T0088075.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24945478 25004426 + MGP_NODShiLtJ_P0088075 Fgfr1 protein_coding protein_coding MGP_NODShiLtJ_T0088076.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24945998 24984681 + MGP_NODShiLtJ_P0088076 Fgfr1 protein_coding protein_coding MGP_NODShiLtJ_T0088077.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24959533 25004224 + MGP_NODShiLtJ_P0088077 Fgfr1 protein_coding protein_coding MGP_NODShiLtJ_T0088078.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24984568 24999899 + Fgfr1 protein_coding processed_transcript MGP_NODShiLtJ_T0088079.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24987227 24992848 + Fgfr1 protein_coding retained_intron MGP_NODShiLtJ_T0088080.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24992538 25004432 + Fgfr1 protein_coding retained_intron MGP_NODShiLtJ_T0088081.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24996641 25004431 + Fgfr1 protein_coding retained_intron MGP_NODShiLtJ_T0088082.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24999178 25002042 + Fgfr1 protein_coding retained_intron MGP_NODShiLtJ_T0088083.1 MGP_NODShiLtJ_G0033288.1 mouse_genomes_project 8 24999415 25002104 + Fgfr1 protein_coding retained_intron MGP_NODShiLtJ_T0090119.1 MGP_NODShiLtJ_G0033947.1 mouse_genomes_project 8 125367543 125407481 + MGP_NODShiLtJ_P0090119 Zfp1 protein_coding protein_coding MGP_NODShiLtJ_T0089870.1 MGP_NODShiLtJ_G0033867.1 mouse_genomes_project 8 118971777 118984122 + MGP_NODShiLtJ_P0089870 Edc4 protein_coding protein_coding MGP_NODShiLtJ_T0089871.1 MGP_NODShiLtJ_G0033867.1 mouse_genomes_project 8 118971847 118984105 + MGP_NODShiLtJ_P0089871 Edc4 protein_coding protein_coding MGP_NODShiLtJ_T0089872.1 MGP_NODShiLtJ_G0033867.1 mouse_genomes_project 8 118971973 118985805 + MGP_NODShiLtJ_P0089872 Edc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089873.1 MGP_NODShiLtJ_G0033867.1 mouse_genomes_project 8 118977865 118979042 + Edc4 protein_coding retained_intron MGP_NODShiLtJ_T0089874.1 MGP_NODShiLtJ_G0033867.1 mouse_genomes_project 8 118978274 118980429 + MGP_NODShiLtJ_P0089874 Edc4 protein_coding protein_coding MGP_NODShiLtJ_T0089875.1 MGP_NODShiLtJ_G0033867.1 mouse_genomes_project 8 118978288 118979610 + MGP_NODShiLtJ_P0089875 Edc4 protein_coding protein_coding MGP_NODShiLtJ_T0089876.1 MGP_NODShiLtJ_G0033867.1 mouse_genomes_project 8 118981164 118982225 + Edc4 protein_coding retained_intron MGP_NODShiLtJ_T0088549.1 MGP_NODShiLtJ_G0033439.1 mouse_genomes_project 8 67864535 68052297 + MGP_NODShiLtJ_P0088549 Sh3rf1 protein_coding protein_coding MGP_NODShiLtJ_T0010908.1 MGP_NODShiLtJ_G0009041.1 mouse_genomes_project 8 124830182 124830264 + Gm23193 miRNA miRNA MGP_NODShiLtJ_T0002284.1 MGP_NODShiLtJ_G0002195.1 mouse_genomes_project 8 93955154 93957334 + TEC TEC MGP_NODShiLtJ_T0009071.1 MGP_NODShiLtJ_G0007287.1 mouse_genomes_project 8 102372227 102388989 + Gm28516 lincRNA lincRNA MGP_NODShiLtJ_T0102220.1 MGP_NODShiLtJ_G0040386.1 mouse_genomes_project 8 211 2301 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009090.1 MGP_NODShiLtJ_G0007297.1 mouse_genomes_project 8 118680980 118695416 - Gm5914 lincRNA lincRNA MGP_NODShiLtJ_T0009091.1 MGP_NODShiLtJ_G0007297.1 mouse_genomes_project 8 118680994 118695551 - Gm5914 lincRNA lincRNA MGP_NODShiLtJ_T0087845.1 MGP_NODShiLtJ_G0033196.1 mouse_genomes_project 8 12377737 12378535 + MGP_NODShiLtJ_P0087845 protein_coding protein_coding MGP_NODShiLtJ_T0089680.1 MGP_NODShiLtJ_G0033787.1 mouse_genomes_project 8 105880036 105885854 - MGP_NODShiLtJ_P0089680 Zfp319 protein_coding protein_coding MGP_NODShiLtJ_T0099554.1 MGP_NODShiLtJ_G0037948.1 mouse_genomes_project 8 86649219 86649327 - Gm23468 snRNA snRNA MGP_NODShiLtJ_T0089591.1 MGP_NODShiLtJ_G0033757.1 mouse_genomes_project 8 104518942 104563143 - MGP_NODShiLtJ_P0089591 Bbs2 protein_coding protein_coding MGP_NODShiLtJ_T0089592.1 MGP_NODShiLtJ_G0033757.1 mouse_genomes_project 8 104519132 104521186 - Bbs2 protein_coding processed_transcript MGP_NODShiLtJ_T0089593.1 MGP_NODShiLtJ_G0033757.1 mouse_genomes_project 8 104526109 104531661 - Bbs2 protein_coding processed_transcript MGP_NODShiLtJ_T0088445.1 MGP_NODShiLtJ_G0033406.1 mouse_genomes_project 8 50642550 50644306 + MGP_NODShiLtJ_P0088445 protein_coding protein_coding MGP_NODShiLtJ_T0088857.1 MGP_NODShiLtJ_G0033530.1 mouse_genomes_project 8 79036843 79040732 - MGP_NODShiLtJ_P0088857 Ifi30 protein_coding protein_coding MGP_NODShiLtJ_T0087718.1 MGP_NODShiLtJ_G0033158.1 mouse_genomes_project 8 9766916 9809825 - MGP_NODShiLtJ_P0087718 Cars2 protein_coding protein_coding MGP_NODShiLtJ_T0087719.1 MGP_NODShiLtJ_G0033158.1 mouse_genomes_project 8 9766918 9809731 - MGP_NODShiLtJ_P0087719 Cars2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010840.1 MGP_NODShiLtJ_G0008973.1 mouse_genomes_project 8 9912553 9912596 - Mir7238 miRNA miRNA MGP_NODShiLtJ_T0099580.1 MGP_NODShiLtJ_G0037974.1 mouse_genomes_project 8 142166797 142166968 + Gm22730 snRNA snRNA MGP_NODShiLtJ_T0089308.1 MGP_NODShiLtJ_G0033674.1 mouse_genomes_project 8 94515795 94519635 + MGP_NODShiLtJ_P0089308 G430095P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0089028.1 MGP_NODShiLtJ_G0033585.1 mouse_genomes_project 8 80666209 80684703 + MGP_NODShiLtJ_P0089028 Ap1m1 protein_coding protein_coding MGP_NODShiLtJ_T0089029.1 MGP_NODShiLtJ_G0033585.1 mouse_genomes_project 8 80666301 80677398 + MGP_NODShiLtJ_P0089029 Ap1m1 protein_coding protein_coding MGP_NODShiLtJ_T0089030.1 MGP_NODShiLtJ_G0033585.1 mouse_genomes_project 8 80666514 80679334 + MGP_NODShiLtJ_P0089030 Ap1m1 protein_coding protein_coding MGP_NODShiLtJ_T0089031.1 MGP_NODShiLtJ_G0033585.1 mouse_genomes_project 8 80680371 80683925 + Ap1m1 protein_coding retained_intron MGP_NODShiLtJ_T0089032.1 MGP_NODShiLtJ_G0033585.1 mouse_genomes_project 8 80680451 80684231 + Ap1m1 protein_coding retained_intron MGP_NODShiLtJ_T0090275.1 MGP_NODShiLtJ_G0034005.1 mouse_genomes_project 8 135186480 135196770 - Gins2 protein_coding retained_intron MGP_NODShiLtJ_T0090276.1 MGP_NODShiLtJ_G0034005.1 mouse_genomes_project 8 135186480 135197094 - MGP_NODShiLtJ_P0090276 Gins2 protein_coding protein_coding MGP_NODShiLtJ_T0090277.1 MGP_NODShiLtJ_G0034005.1 mouse_genomes_project 8 135189391 135194032 - Gins2 protein_coding retained_intron MGP_NODShiLtJ_T0090278.1 MGP_NODShiLtJ_G0034005.1 mouse_genomes_project 8 135190002 135196824 - Gins2 protein_coding processed_transcript MGP_NODShiLtJ_T0088224.1 MGP_NODShiLtJ_G0033345.1 mouse_genomes_project 8 36316973 36417672 + MGP_NODShiLtJ_P0088224 Mfhas1 protein_coding protein_coding MGP_NODShiLtJ_T0088225.1 MGP_NODShiLtJ_G0033345.1 mouse_genomes_project 8 36336553 36415257 + Mfhas1 protein_coding processed_transcript MGP_NODShiLtJ_T0099539.1 MGP_NODShiLtJ_G0037933.1 mouse_genomes_project 8 32586793 32586913 + Gm22140 snRNA snRNA MGP_NODShiLtJ_T0005297.1 MGP_NODShiLtJ_G0004484.1 mouse_genomes_project 8 48919704 48923188 + Gm15634 antisense antisense MGP_NODShiLtJ_T0088274.1 MGP_NODShiLtJ_G0033360.1 mouse_genomes_project 8 42285941 42327581 + MGP_NODShiLtJ_P0088274 Vps37a protein_coding protein_coding MGP_NODShiLtJ_T0010871.1 MGP_NODShiLtJ_G0009004.1 mouse_genomes_project 8 93664516 93664630 - Gm44450 miRNA miRNA MGP_NODShiLtJ_T0009083.1 MGP_NODShiLtJ_G0007293.1 mouse_genomes_project 8 104938599 104949857 - 9330175E14Rik lincRNA lincRNA MGP_NODShiLtJ_T0009084.1 MGP_NODShiLtJ_G0007293.1 mouse_genomes_project 8 104945522 104949982 - 9330175E14Rik lincRNA lincRNA MGP_NODShiLtJ_T0009085.1 MGP_NODShiLtJ_G0007293.1 mouse_genomes_project 8 104948826 104950809 - 9330175E14Rik lincRNA lincRNA MGP_NODShiLtJ_T0089940.1 MGP_NODShiLtJ_G0033893.1 mouse_genomes_project 8 120125535 120212780 + MGP_NODShiLtJ_P0089940 Sntb2 protein_coding protein_coding MGP_NODShiLtJ_T0088176.1 MGP_NODShiLtJ_G0033329.1 mouse_genomes_project 8 34038648 34077833 + MGP_NODShiLtJ_P0088176 protein_coding protein_coding MGP_NODShiLtJ_T0088177.1 MGP_NODShiLtJ_G0033329.1 mouse_genomes_project 8 34039232 34110762 + MGP_NODShiLtJ_P0088177 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088178.1 MGP_NODShiLtJ_G0033329.1 mouse_genomes_project 8 34039232 34097405 + MGP_NODShiLtJ_P0088178 protein_coding protein_coding MGP_NODShiLtJ_T0088179.1 MGP_NODShiLtJ_G0033329.1 mouse_genomes_project 8 34094390 34110762 + MGP_NODShiLtJ_P0088179 protein_coding protein_coding MGP_NODShiLtJ_T0010894.1 MGP_NODShiLtJ_G0009027.1 mouse_genomes_project 8 107307858 107307940 + Gm24132 miRNA miRNA MGP_NODShiLtJ_T0010865.1 MGP_NODShiLtJ_G0008998.1 mouse_genomes_project 8 79221865 79221959 + Mir1969 miRNA miRNA MGP_NODShiLtJ_T0089467.1 MGP_NODShiLtJ_G0033720.1 mouse_genomes_project 8 98154980 98172479 + MGP_NODShiLtJ_P0089467 Cnep1r1 protein_coding protein_coding MGP_NODShiLtJ_T0089468.1 MGP_NODShiLtJ_G0033720.1 mouse_genomes_project 8 98154989 98168166 + Cnep1r1 protein_coding processed_transcript MGP_NODShiLtJ_T0089469.1 MGP_NODShiLtJ_G0033720.1 mouse_genomes_project 8 98154998 98172483 + MGP_NODShiLtJ_P0089469 Cnep1r1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089470.1 MGP_NODShiLtJ_G0033720.1 mouse_genomes_project 8 98155011 98171804 + Cnep1r1 protein_coding retained_intron MGP_NODShiLtJ_T0089471.1 MGP_NODShiLtJ_G0033720.1 mouse_genomes_project 8 98155011 98168999 + MGP_NODShiLtJ_P0089471 Cnep1r1 protein_coding protein_coding MGP_NODShiLtJ_T0089472.1 MGP_NODShiLtJ_G0033720.1 mouse_genomes_project 8 98155018 98168382 + MGP_NODShiLtJ_P0089472 Cnep1r1 protein_coding protein_coding MGP_NODShiLtJ_T0087813.1 MGP_NODShiLtJ_G0033180.1 mouse_genomes_project 8 11689962 11727196 + MGP_NODShiLtJ_P0087813 Tmco3 protein_coding protein_coding MGP_NODShiLtJ_T0087814.1 MGP_NODShiLtJ_G0033180.1 mouse_genomes_project 8 11689976 11725146 + MGP_NODShiLtJ_P0087814 Tmco3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090412.1 MGP_NODShiLtJ_G0034035.1 mouse_genomes_project 8 137290406 137292677 - MGP_NODShiLtJ_P0090412 Aprt protein_coding protein_coding MGP_NODShiLtJ_T0089242.1 MGP_NODShiLtJ_G0033662.1 mouse_genomes_project 8 93898315 93914614 + MGP_NODShiLtJ_P0089242 4930432K21Rik protein_coding protein_coding MGP_NODShiLtJ_T0089243.1 MGP_NODShiLtJ_G0033662.1 mouse_genomes_project 8 93898443 93924914 + MGP_NODShiLtJ_P0089243 4930432K21Rik protein_coding protein_coding MGP_NODShiLtJ_T0089244.1 MGP_NODShiLtJ_G0033662.1 mouse_genomes_project 8 93898536 93924913 + MGP_NODShiLtJ_P0089244 4930432K21Rik protein_coding protein_coding MGP_NODShiLtJ_T0099536.1 MGP_NODShiLtJ_G0037930.1 mouse_genomes_project 8 24315014 24315117 + Gm23898 snRNA snRNA MGP_NODShiLtJ_T0100847.1 MGP_NODShiLtJ_G0039241.1 mouse_genomes_project 8 125074960 125075092 + Gm24793 snoRNA snoRNA MGP_NODShiLtJ_T0089247.1 MGP_NODShiLtJ_G0033665.1 mouse_genomes_project 8 94005506 94009818 - MGP_NODShiLtJ_P0089247 D8Ertd738e protein_coding protein_coding MGP_NODShiLtJ_T0089684.1 MGP_NODShiLtJ_G0033789.1 mouse_genomes_project 8 105906832 105928841 + MGP_NODShiLtJ_P0089684 Mmp15 protein_coding protein_coding MGP_NODShiLtJ_T0005279.1 MGP_NODShiLtJ_G0004470.1 mouse_genomes_project 8 13523050 13523571 - Gm16350 antisense antisense MGP_NODShiLtJ_T0088319.1 MGP_NODShiLtJ_G0033376.1 mouse_genomes_project 8 47563796 47682300 + MGP_NODShiLtJ_P0088319 Fat1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088320.1 MGP_NODShiLtJ_G0033376.1 mouse_genomes_project 8 47564276 47683148 + MGP_NODShiLtJ_P0088320 Fat1 protein_coding protein_coding MGP_NODShiLtJ_T0088321.1 MGP_NODShiLtJ_G0033376.1 mouse_genomes_project 8 47579034 47683148 + MGP_NODShiLtJ_P0088321 Fat1 protein_coding protein_coding MGP_NODShiLtJ_T0088322.1 MGP_NODShiLtJ_G0033376.1 mouse_genomes_project 8 47664248 47683136 + MGP_NODShiLtJ_P0088322 Fat1 protein_coding protein_coding MGP_NODShiLtJ_T0088323.1 MGP_NODShiLtJ_G0033376.1 mouse_genomes_project 8 47675423 47681722 + MGP_NODShiLtJ_P0088323 Fat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088324.1 MGP_NODShiLtJ_G0033376.1 mouse_genomes_project 8 47675423 47681722 + MGP_NODShiLtJ_P0088324 Fat1 protein_coding protein_coding MGP_NODShiLtJ_T0088325.1 MGP_NODShiLtJ_G0033376.1 mouse_genomes_project 8 47676025 47681391 + Fat1 protein_coding retained_intron MGP_NODShiLtJ_T0087697.1 MGP_NODShiLtJ_G0033149.1 mouse_genomes_project 8 8082116 8088465 - MGP_NODShiLtJ_P0087697 Lig4 protein_coding protein_coding MGP_NODShiLtJ_T0087698.1 MGP_NODShiLtJ_G0033149.1 mouse_genomes_project 8 8083018 8089828 - MGP_NODShiLtJ_P0087698 Lig4 protein_coding protein_coding MGP_NODShiLtJ_T0090095.1 MGP_NODShiLtJ_G0033943.1 mouse_genomes_project 8 124996073 125017378 - Fa2h protein_coding processed_transcript MGP_NODShiLtJ_T0090096.1 MGP_NODShiLtJ_G0033943.1 mouse_genomes_project 8 124996079 125047555 - MGP_NODShiLtJ_P0090096 Fa2h protein_coding protein_coding MGP_NODShiLtJ_T0090097.1 MGP_NODShiLtJ_G0033943.1 mouse_genomes_project 8 124996703 124998996 - Fa2h protein_coding processed_transcript MGP_NODShiLtJ_T0090098.1 MGP_NODShiLtJ_G0033943.1 mouse_genomes_project 8 124998408 125047549 - Fa2h protein_coding retained_intron MGP_NODShiLtJ_T0088329.1 MGP_NODShiLtJ_G0033379.1 mouse_genomes_project 8 47921228 47950773 - MGP_NODShiLtJ_P0088329 protein_coding protein_coding MGP_NODShiLtJ_T0088523.1 MGP_NODShiLtJ_G0033434.1 mouse_genomes_project 8 67111705 67150845 + MGP_NODShiLtJ_P0088523 Aadat protein_coding protein_coding MGP_NODShiLtJ_T0088150.1 MGP_NODShiLtJ_G0033314.1 mouse_genomes_project 8 27081946 27111592 + MGP_NODShiLtJ_P0088150 Chrnb3 protein_coding protein_coding MGP_NODShiLtJ_T0088207.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34654135 34658746 - Dctn6 protein_coding retained_intron MGP_NODShiLtJ_T0088208.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34654278 34678047 - MGP_NODShiLtJ_P0088208 Dctn6 protein_coding protein_coding MGP_NODShiLtJ_T0088209.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34654293 34677325 - Dctn6 protein_coding processed_transcript MGP_NODShiLtJ_T0088210.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34654322 34656646 - Dctn6 protein_coding retained_intron MGP_NODShiLtJ_T0088211.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34654353 34677363 - MGP_NODShiLtJ_P0088211 Dctn6 protein_coding protein_coding MGP_NODShiLtJ_T0088212.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34654459 34677952 - MGP_NODShiLtJ_P0088212 Dctn6 protein_coding protein_coding MGP_NODShiLtJ_T0088213.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34656231 34668387 - Dctn6 protein_coding retained_intron MGP_NODShiLtJ_T0088214.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34658405 34677988 - Dctn6 protein_coding retained_intron MGP_NODShiLtJ_T0088215.1 MGP_NODShiLtJ_G0033336.1 mouse_genomes_project 8 34658619 34677974 - MGP_NODShiLtJ_P0088215 Dctn6 protein_coding protein_coding MGP_NODShiLtJ_T0009021.1 MGP_NODShiLtJ_G0007249.1 mouse_genomes_project 8 62957699 62967319 + lincRNA lincRNA MGP_NODShiLtJ_T0088718.1 MGP_NODShiLtJ_G0033493.1 mouse_genomes_project 8 78283764 78290907 + MGP_NODShiLtJ_P0088718 Tm6sf2 protein_coding protein_coding MGP_NODShiLtJ_T0088719.1 MGP_NODShiLtJ_G0033493.1 mouse_genomes_project 8 78283772 78290893 + MGP_NODShiLtJ_P0088719 Tm6sf2 protein_coding protein_coding MGP_NODShiLtJ_T0088720.1 MGP_NODShiLtJ_G0033493.1 mouse_genomes_project 8 78285121 78286555 + Tm6sf2 protein_coding retained_intron MGP_NODShiLtJ_T0088721.1 MGP_NODShiLtJ_G0033493.1 mouse_genomes_project 8 78286269 78288970 + Tm6sf2 protein_coding retained_intron MGP_NODShiLtJ_T0088722.1 MGP_NODShiLtJ_G0033493.1 mouse_genomes_project 8 78288246 78289461 + Tm6sf2 protein_coding retained_intron MGP_NODShiLtJ_T0087611.1 MGP_NODShiLtJ_G0033120.1 mouse_genomes_project 8 651515 654145 + MGP_NODShiLtJ_P0087611 Mcemp1 protein_coding protein_coding MGP_NODShiLtJ_T0015881.1 MGP_NODShiLtJ_G0013989.1 mouse_genomes_project 8 95740099 95741164 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015858.1 MGP_NODShiLtJ_G0013966.1 mouse_genomes_project 8 64690827 64691769 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088474.1 MGP_NODShiLtJ_G0033415.1 mouse_genomes_project 8 58921094 59051620 + MGP_NODShiLtJ_P0088474 Vegfc protein_coding protein_coding MGP_NODShiLtJ_T0087736.1 MGP_NODShiLtJ_G0033164.1 mouse_genomes_project 8 10617881 10619720 + MGP_NODShiLtJ_P0087736 A230072I06Rik protein_coding protein_coding MGP_NODShiLtJ_T0090258.1 MGP_NODShiLtJ_G0034002.1 mouse_genomes_project 8 134689672 134743080 + MGP_NODShiLtJ_P0090258 6430548M08Rik protein_coding protein_coding MGP_NODShiLtJ_T0090259.1 MGP_NODShiLtJ_G0034002.1 mouse_genomes_project 8 134689672 134730924 + MGP_NODShiLtJ_P0090259 6430548M08Rik protein_coding protein_coding MGP_NODShiLtJ_T0090260.1 MGP_NODShiLtJ_G0034002.1 mouse_genomes_project 8 134689673 134743078 + MGP_NODShiLtJ_P0090260 6430548M08Rik protein_coding protein_coding MGP_NODShiLtJ_T0090261.1 MGP_NODShiLtJ_G0034002.1 mouse_genomes_project 8 134720786 134721842 + MGP_NODShiLtJ_P0090261 6430548M08Rik protein_coding protein_coding MGP_NODShiLtJ_T0090262.1 MGP_NODShiLtJ_G0034002.1 mouse_genomes_project 8 134721027 134728895 + MGP_NODShiLtJ_P0090262 6430548M08Rik protein_coding protein_coding MGP_NODShiLtJ_T0090263.1 MGP_NODShiLtJ_G0034002.1 mouse_genomes_project 8 134721252 134740662 + MGP_NODShiLtJ_P0090263 6430548M08Rik protein_coding protein_coding MGP_NODShiLtJ_T0090264.1 MGP_NODShiLtJ_G0034002.1 mouse_genomes_project 8 134733635 134739160 + 6430548M08Rik protein_coding processed_transcript MGP_NODShiLtJ_T0089598.1 MGP_NODShiLtJ_G0033762.1 mouse_genomes_project 8 104706071 104811834 + MGP_NODShiLtJ_P0089598 Nup93 protein_coding protein_coding MGP_NODShiLtJ_T0089599.1 MGP_NODShiLtJ_G0033762.1 mouse_genomes_project 8 104720176 104812039 + MGP_NODShiLtJ_P0089599 Nup93 protein_coding protein_coding MGP_NODShiLtJ_T0089566.1 MGP_NODShiLtJ_G0033752.1 mouse_genomes_project 8 103920473 103957041 - MGP_NODShiLtJ_P0089566 Ces5a protein_coding protein_coding MGP_NODShiLtJ_T0088670.1 MGP_NODShiLtJ_G0033474.1 mouse_genomes_project 8 77553924 77555557 - MGP_NODShiLtJ_P0088670 protein_coding protein_coding MGP_NODShiLtJ_T0015870.1 MGP_NODShiLtJ_G0013978.1 mouse_genomes_project 8 88805404 88806379 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018314.1 MGP_NODShiLtJ_G0015584.1 mouse_genomes_project 8 86704178 86782584 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018315.1 MGP_NODShiLtJ_G0015584.1 mouse_genomes_project 8 86754014 86875010 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018316.1 MGP_NODShiLtJ_G0015584.1 mouse_genomes_project 8 86870400 86874252 + processed_transcript processed_transcript MGP_NODShiLtJ_T0089430.1 MGP_NODShiLtJ_G0033710.1 mouse_genomes_project 8 95498176 95557851 - MGP_NODShiLtJ_P0089430 Neto2 protein_coding protein_coding MGP_NODShiLtJ_T0089431.1 MGP_NODShiLtJ_G0033710.1 mouse_genomes_project 8 95498303 95568430 - MGP_NODShiLtJ_P0089431 Neto2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010879.1 MGP_NODShiLtJ_G0009012.1 mouse_genomes_project 8 93962773 93962860 + Mir27a miRNA miRNA MGP_NODShiLtJ_T0087619.1 MGP_NODShiLtJ_G0033126.1 mouse_genomes_project 8 880427 888364 - MGP_NODShiLtJ_P0087619 Cd209d protein_coding protein_coding MGP_NODShiLtJ_T0097838.1 MGP_NODShiLtJ_G0036250.1 mouse_genomes_project 8 99258714 99259616 - pseudogene pseudogene MGP_NODShiLtJ_T0088146.1 MGP_NODShiLtJ_G0033312.1 mouse_genomes_project 8 26883090 26886903 - MGP_NODShiLtJ_P0088146 Adrb3 protein_coding protein_coding MGP_NODShiLtJ_T0088147.1 MGP_NODShiLtJ_G0033312.1 mouse_genomes_project 8 26883315 26885898 - MGP_NODShiLtJ_P0088147 Adrb3 protein_coding protein_coding MGP_NODShiLtJ_T0088148.1 MGP_NODShiLtJ_G0033312.1 mouse_genomes_project 8 26884113 26885809 - MGP_NODShiLtJ_P0088148 Adrb3 protein_coding protein_coding MGP_NODShiLtJ_T0089318.1 MGP_NODShiLtJ_G0033678.1 mouse_genomes_project 8 94644425 94649511 - MGP_NODShiLtJ_P0089318 Calr protein_coding protein_coding MGP_NODShiLtJ_T0089319.1 MGP_NODShiLtJ_G0033678.1 mouse_genomes_project 8 94645168 94647492 - Calr protein_coding retained_intron MGP_NODShiLtJ_T0089320.1 MGP_NODShiLtJ_G0033678.1 mouse_genomes_project 8 94648012 94649407 - Calr protein_coding retained_intron MGP_NODShiLtJ_T0089321.1 MGP_NODShiLtJ_G0033678.1 mouse_genomes_project 8 94648326 94649403 - Calr protein_coding retained_intron MGP_NODShiLtJ_T0009054.1 MGP_NODShiLtJ_G0007278.1 mouse_genomes_project 8 97453157 97456474 + Gm19872 lincRNA lincRNA MGP_NODShiLtJ_T0010901.1 MGP_NODShiLtJ_G0009034.1 mouse_genomes_project 8 120297467 120297549 - Mir7075 miRNA miRNA MGP_NODShiLtJ_T0015830.1 MGP_NODShiLtJ_G0013938.1 mouse_genomes_project 8 17538345 17538720 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010842.1 MGP_NODShiLtJ_G0008975.1 mouse_genomes_project 8 11332715 11332845 + Gm38671 miRNA miRNA MGP_NODShiLtJ_T0098095.1 MGP_NODShiLtJ_G0036507.1 mouse_genomes_project 8 50856973 50857086 + n-R5s97 rRNA rRNA MGP_NODShiLtJ_T0005280.1 MGP_NODShiLtJ_G0004471.1 mouse_genomes_project 8 13580208 13584020 - 5830468F06Rik antisense antisense MGP_NODShiLtJ_T0088163.1 MGP_NODShiLtJ_G0033320.1 mouse_genomes_project 8 31434586 31449510 + MGP_NODShiLtJ_P0088163 Tti2 protein_coding protein_coding MGP_NODShiLtJ_T0089685.1 MGP_NODShiLtJ_G0033790.1 mouse_genomes_project 8 105970542 105984974 - MGP_NODShiLtJ_P0089685 Cfap20 protein_coding protein_coding MGP_NODShiLtJ_T0090214.1 MGP_NODShiLtJ_G0033987.1 mouse_genomes_project 8 133979966 134001751 - MGP_NODShiLtJ_P0090214 Slc38a8 protein_coding protein_coding MGP_NODShiLtJ_T0090215.1 MGP_NODShiLtJ_G0033987.1 mouse_genomes_project 8 133985885 133997149 - MGP_NODShiLtJ_P0090215 Slc38a8 protein_coding protein_coding MGP_NODShiLtJ_T0090216.1 MGP_NODShiLtJ_G0033987.1 mouse_genomes_project 8 133986463 133995038 - Slc38a8 protein_coding retained_intron MGP_NODShiLtJ_T0090217.1 MGP_NODShiLtJ_G0033987.1 mouse_genomes_project 8 133994342 134001347 - MGP_NODShiLtJ_P0090217 Slc38a8 protein_coding protein_coding MGP_NODShiLtJ_T0090218.1 MGP_NODShiLtJ_G0033987.1 mouse_genomes_project 8 133996246 134001748 - MGP_NODShiLtJ_P0090218 Slc38a8 protein_coding protein_coding MGP_NODShiLtJ_T0100812.1 MGP_NODShiLtJ_G0039206.1 mouse_genomes_project 8 50322601 50322735 + Gm22857 snoRNA snoRNA MGP_NODShiLtJ_T0015866.1 MGP_NODShiLtJ_G0013974.1 mouse_genomes_project 8 82301838 82302321 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089377.1 MGP_NODShiLtJ_G0033692.1 mouse_genomes_project 8 94844551 94851731 - MGP_NODShiLtJ_P0089377 Asna1 protein_coding protein_coding MGP_NODShiLtJ_T0089001.1 MGP_NODShiLtJ_G0033576.1 mouse_genomes_project 8 80319084 80333887 + MGP_NODShiLtJ_P0089001 Zfp617 protein_coding protein_coding MGP_NODShiLtJ_T0089215.1 MGP_NODShiLtJ_G0033649.1 mouse_genomes_project 8 93709945 93734471 + MGP_NODShiLtJ_P0089215 Prkaca protein_coding protein_coding MGP_NODShiLtJ_T0102221.1 MGP_NODShiLtJ_G0040387.1 mouse_genomes_project 8 18133838 18136369 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0088014.1 MGP_NODShiLtJ_G0033269.1 mouse_genomes_project 8 22359910 22365598 + MGP_NODShiLtJ_P0088014 Nkx6-3 protein_coding protein_coding MGP_NODShiLtJ_T0090596.1 MGP_NODShiLtJ_G0034093.1 mouse_genomes_project 8 140774648 140927654 - MGP_NODShiLtJ_P0090596 Pcnx2 protein_coding protein_coding MGP_NODShiLtJ_T0090597.1 MGP_NODShiLtJ_G0034093.1 mouse_genomes_project 8 140774649 140869525 - Pcnx2 protein_coding retained_intron MGP_NODShiLtJ_T0090598.1 MGP_NODShiLtJ_G0034093.1 mouse_genomes_project 8 140774651 140797608 - Pcnx2 protein_coding retained_intron MGP_NODShiLtJ_T0090599.1 MGP_NODShiLtJ_G0034093.1 mouse_genomes_project 8 140855477 140857274 - Pcnx2 protein_coding retained_intron MGP_NODShiLtJ_T0090600.1 MGP_NODShiLtJ_G0034093.1 mouse_genomes_project 8 140867283 140927654 - MGP_NODShiLtJ_P0090600 Pcnx2 protein_coding protein_coding MGP_NODShiLtJ_T0090601.1 MGP_NODShiLtJ_G0034093.1 mouse_genomes_project 8 140890835 140927612 - Pcnx2 protein_coding processed_transcript MGP_NODShiLtJ_T0088493.1 MGP_NODShiLtJ_G0033424.1 mouse_genomes_project 8 62015085 62035149 - MGP_NODShiLtJ_P0088493 Cep44 protein_coding protein_coding MGP_NODShiLtJ_T0088494.1 MGP_NODShiLtJ_G0033424.1 mouse_genomes_project 8 62015085 62029770 - MGP_NODShiLtJ_P0088494 Cep44 protein_coding protein_coding MGP_NODShiLtJ_T0088495.1 MGP_NODShiLtJ_G0033424.1 mouse_genomes_project 8 62027211 62035135 - MGP_NODShiLtJ_P0088495 Cep44 protein_coding protein_coding MGP_NODShiLtJ_T0088496.1 MGP_NODShiLtJ_G0033424.1 mouse_genomes_project 8 62028498 62035091 - MGP_NODShiLtJ_P0088496 Cep44 protein_coding protein_coding MGP_NODShiLtJ_T0088497.1 MGP_NODShiLtJ_G0033424.1 mouse_genomes_project 8 62028565 62035164 - MGP_NODShiLtJ_P0088497 Cep44 protein_coding protein_coding MGP_NODShiLtJ_T0088498.1 MGP_NODShiLtJ_G0033424.1 mouse_genomes_project 8 62029756 62035339 - MGP_NODShiLtJ_P0088498 Cep44 protein_coding protein_coding MGP_NODShiLtJ_T0088499.1 MGP_NODShiLtJ_G0033424.1 mouse_genomes_project 8 62033272 62034549 - Cep44 protein_coding processed_transcript MGP_NODShiLtJ_T0088500.1 MGP_NODShiLtJ_G0033424.1 mouse_genomes_project 8 62033620 62035095 - Cep44 protein_coding processed_transcript MGP_NODShiLtJ_T0088475.1 MGP_NODShiLtJ_G0033416.1 mouse_genomes_project 8 59458335 59467901 - MGP_NODShiLtJ_P0088475 Spcs3 protein_coding protein_coding MGP_NODShiLtJ_T0099553.1 MGP_NODShiLtJ_G0037947.1 mouse_genomes_project 8 86249720 86249892 + Gm23260 snRNA snRNA MGP_NODShiLtJ_T0099545.1 MGP_NODShiLtJ_G0037939.1 mouse_genomes_project 8 54100816 54100879 + Gm23986 snRNA snRNA MGP_NODShiLtJ_T0089160.1 MGP_NODShiLtJ_G0033634.1 mouse_genomes_project 8 92982473 93004504 - MGP_NODShiLtJ_P0089160 Elmod2 protein_coding protein_coding MGP_NODShiLtJ_T0089161.1 MGP_NODShiLtJ_G0033634.1 mouse_genomes_project 8 92982863 93004504 - MGP_NODShiLtJ_P0089161 Elmod2 protein_coding protein_coding MGP_NODShiLtJ_T0089162.1 MGP_NODShiLtJ_G0033634.1 mouse_genomes_project 8 92986061 92996642 - Elmod2 protein_coding retained_intron MGP_NODShiLtJ_T0089163.1 MGP_NODShiLtJ_G0033634.1 mouse_genomes_project 8 92988345 93003467 - Elmod2 protein_coding retained_intron MGP_NODShiLtJ_T0089164.1 MGP_NODShiLtJ_G0033634.1 mouse_genomes_project 8 92996235 93004422 - Elmod2 protein_coding retained_intron MGP_NODShiLtJ_T0089165.1 MGP_NODShiLtJ_G0033634.1 mouse_genomes_project 8 93000701 93004422 - Elmod2 protein_coding retained_intron MGP_NODShiLtJ_T0010869.1 MGP_NODShiLtJ_G0009002.1 mouse_genomes_project 8 82164889 82164999 - Gm23255 miRNA miRNA MGP_NODShiLtJ_T0088027.1 MGP_NODShiLtJ_G0033277.1 mouse_genomes_project 8 23883998 23911245 - Ido2 protein_coding processed_transcript MGP_NODShiLtJ_T0088028.1 MGP_NODShiLtJ_G0033277.1 mouse_genomes_project 8 23884558 23935083 - MGP_NODShiLtJ_P0088028 Ido2 protein_coding protein_coding MGP_NODShiLtJ_T0088029.1 MGP_NODShiLtJ_G0033277.1 mouse_genomes_project 8 23885558 23892913 - Ido2 protein_coding retained_intron MGP_NODShiLtJ_T0088030.1 MGP_NODShiLtJ_G0033277.1 mouse_genomes_project 8 23907405 23911202 - Ido2 protein_coding processed_transcript MGP_NODShiLtJ_T0090021.1 MGP_NODShiLtJ_G0033920.1 mouse_genomes_project 8 123515198 123525022 + MGP_NODShiLtJ_P0090021 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090022.1 MGP_NODShiLtJ_G0033920.1 mouse_genomes_project 8 123515717 123519906 + MGP_NODShiLtJ_P0090022 protein_coding protein_coding MGP_NODShiLtJ_T0089601.1 MGP_NODShiLtJ_G0033764.1 mouse_genomes_project 8 104887545 104896545 + MGP_NODShiLtJ_P0089601 Herpud1 protein_coding protein_coding MGP_NODShiLtJ_T0089602.1 MGP_NODShiLtJ_G0033764.1 mouse_genomes_project 8 104887602 104896526 + MGP_NODShiLtJ_P0089602 Herpud1 protein_coding protein_coding MGP_NODShiLtJ_T0089603.1 MGP_NODShiLtJ_G0033764.1 mouse_genomes_project 8 104888660 104893574 + Herpud1 protein_coding processed_transcript MGP_NODShiLtJ_T0089604.1 MGP_NODShiLtJ_G0033764.1 mouse_genomes_project 8 104888706 104893414 + Herpud1 protein_coding processed_transcript MGP_NODShiLtJ_T0089605.1 MGP_NODShiLtJ_G0033764.1 mouse_genomes_project 8 104894698 104896077 + Herpud1 protein_coding retained_intron MGP_NODShiLtJ_T0089539.1 MGP_NODShiLtJ_G0033740.1 mouse_genomes_project 8 103212606 103237412 + MGP_NODShiLtJ_P0089539 Mmp2 protein_coding protein_coding MGP_NODShiLtJ_T0088998.1 MGP_NODShiLtJ_G0033575.1 mouse_genomes_project 8 80304508 80312326 + MGP_NODShiLtJ_P0088998 Zfp882 protein_coding protein_coding MGP_NODShiLtJ_T0088999.1 MGP_NODShiLtJ_G0033575.1 mouse_genomes_project 8 80304557 80309480 + MGP_NODShiLtJ_P0088999 Zfp882 protein_coding protein_coding MGP_NODShiLtJ_T0089000.1 MGP_NODShiLtJ_G0033575.1 mouse_genomes_project 8 80304805 80309484 + MGP_NODShiLtJ_P0089000 Zfp882 protein_coding protein_coding MGP_NODShiLtJ_T0010924.1 MGP_NODShiLtJ_G0009057.1 mouse_genomes_project 8 143576469 143576549 + Mir1903 miRNA miRNA MGP_NODShiLtJ_T0088232.1 MGP_NODShiLtJ_G0033350.1 mouse_genomes_project 8 37256622 37318243 + MGP_NODShiLtJ_P0088232 6430573F11Rik protein_coding protein_coding MGP_NODShiLtJ_T0088233.1 MGP_NODShiLtJ_G0033350.1 mouse_genomes_project 8 37256648 37319604 + MGP_NODShiLtJ_P0088233 6430573F11Rik protein_coding protein_coding MGP_NODShiLtJ_T0088234.1 MGP_NODShiLtJ_G0033350.1 mouse_genomes_project 8 37257256 37316878 + MGP_NODShiLtJ_P0088234 6430573F11Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088235.1 MGP_NODShiLtJ_G0033350.1 mouse_genomes_project 8 37291759 37318296 + MGP_NODShiLtJ_P0088235 6430573F11Rik protein_coding protein_coding MGP_NODShiLtJ_T0088236.1 MGP_NODShiLtJ_G0033350.1 mouse_genomes_project 8 37310940 37317880 + 6430573F11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0089951.1 MGP_NODShiLtJ_G0033898.1 mouse_genomes_project 8 120256585 120261718 + MGP_NODShiLtJ_P0089951 Nip7 protein_coding protein_coding MGP_NODShiLtJ_T0089952.1 MGP_NODShiLtJ_G0033898.1 mouse_genomes_project 8 120256585 120261718 + MGP_NODShiLtJ_P0089952 Nip7 protein_coding protein_coding MGP_NODShiLtJ_T0087816.1 MGP_NODShiLtJ_G0033182.1 mouse_genomes_project 8 11799018 11807833 - MGP_NODShiLtJ_P0087816 Atp4b protein_coding protein_coding MGP_NODShiLtJ_T0090175.1 MGP_NODShiLtJ_G0033970.1 mouse_genomes_project 8 131194468 131214449 + MGP_NODShiLtJ_P0090175 Cenpn protein_coding protein_coding MGP_NODShiLtJ_T0088650.1 MGP_NODShiLtJ_G0033469.1 mouse_genomes_project 8 77132931 77187945 - MGP_NODShiLtJ_P0088650 Slc18a1 protein_coding protein_coding MGP_NODShiLtJ_T0088651.1 MGP_NODShiLtJ_G0033469.1 mouse_genomes_project 8 77163360 77175991 - Slc18a1 protein_coding retained_intron MGP_NODShiLtJ_T0088652.1 MGP_NODShiLtJ_G0033469.1 mouse_genomes_project 8 77168419 77174271 - Slc18a1 protein_coding retained_intron MGP_NODShiLtJ_T0088653.1 MGP_NODShiLtJ_G0033469.1 mouse_genomes_project 8 77173863 77187958 - Slc18a1 protein_coding processed_transcript MGP_NODShiLtJ_T0088654.1 MGP_NODShiLtJ_G0033469.1 mouse_genomes_project 8 77173931 77187932 - Slc18a1 protein_coding processed_transcript MGP_NODShiLtJ_T0010850.1 MGP_NODShiLtJ_G0008983.1 mouse_genomes_project 8 22348807 22348935 + Mir486 miRNA miRNA MGP_NODShiLtJ_T0089062.1 MGP_NODShiLtJ_G0033599.1 mouse_genomes_project 8 83682071 83724033 + MGP_NODShiLtJ_P0089062 Hmgxb4 protein_coding protein_coding MGP_NODShiLtJ_T0089063.1 MGP_NODShiLtJ_G0033599.1 mouse_genomes_project 8 83682394 83688514 + Hmgxb4 protein_coding processed_transcript MGP_NODShiLtJ_T0089064.1 MGP_NODShiLtJ_G0033599.1 mouse_genomes_project 8 83682394 83724039 + MGP_NODShiLtJ_P0089064 Hmgxb4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089065.1 MGP_NODShiLtJ_G0033599.1 mouse_genomes_project 8 83682406 83687936 + Hmgxb4 protein_coding processed_transcript MGP_NODShiLtJ_T0089066.1 MGP_NODShiLtJ_G0033599.1 mouse_genomes_project 8 83682427 83689500 + Hmgxb4 protein_coding retained_intron MGP_NODShiLtJ_T0089067.1 MGP_NODShiLtJ_G0033599.1 mouse_genomes_project 8 83704686 83723974 + MGP_NODShiLtJ_P0089067 Hmgxb4 protein_coding protein_coding MGP_NODShiLtJ_T0089068.1 MGP_NODShiLtJ_G0033599.1 mouse_genomes_project 8 83712905 83714127 + Hmgxb4 protein_coding retained_intron MGP_NODShiLtJ_T0088528.1 MGP_NODShiLtJ_G0033436.1 mouse_genomes_project 8 67486423 67503373 + MGP_NODShiLtJ_P0088528 Hpf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088529.1 MGP_NODShiLtJ_G0033436.1 mouse_genomes_project 8 67486450 67503371 + MGP_NODShiLtJ_P0088529 Hpf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088530.1 MGP_NODShiLtJ_G0033436.1 mouse_genomes_project 8 67486456 67503378 + MGP_NODShiLtJ_P0088530 Hpf1 protein_coding protein_coding MGP_NODShiLtJ_T0088531.1 MGP_NODShiLtJ_G0033436.1 mouse_genomes_project 8 67486456 67501783 + MGP_NODShiLtJ_P0088531 Hpf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088532.1 MGP_NODShiLtJ_G0033436.1 mouse_genomes_project 8 67486494 67493058 + Hpf1 protein_coding retained_intron MGP_NODShiLtJ_T0087853.1 MGP_NODShiLtJ_G0033199.1 mouse_genomes_project 8 12515940 12583856 - MGP_NODShiLtJ_P0087853 Erich1 protein_coding protein_coding MGP_NODShiLtJ_T0090195.1 MGP_NODShiLtJ_G0033981.1 mouse_genomes_project 8 132177242 132187661 - MGP_NODShiLtJ_P0090195 Mphosph6 protein_coding protein_coding MGP_NODShiLtJ_T0089458.1 MGP_NODShiLtJ_G0033717.1 mouse_genomes_project 8 97462845 97466584 - MGP_NODShiLtJ_P0089458 Cbln1 protein_coding protein_coding MGP_NODShiLtJ_T0089459.1 MGP_NODShiLtJ_G0033717.1 mouse_genomes_project 8 97463229 97466378 - MGP_NODShiLtJ_P0089459 Cbln1 protein_coding protein_coding MGP_NODShiLtJ_T0009117.1 MGP_NODShiLtJ_G0007318.1 mouse_genomes_project 8 136532421 136544475 + Gm26812 lincRNA lincRNA MGP_NODShiLtJ_T0009118.1 MGP_NODShiLtJ_G0007318.1 mouse_genomes_project 8 136534113 136544187 + Gm26812 lincRNA lincRNA MGP_NODShiLtJ_T0015877.1 MGP_NODShiLtJ_G0013985.1 mouse_genomes_project 8 91312879 91314496 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088108.1 MGP_NODShiLtJ_G0033295.1 mouse_genomes_project 8 25249377 25268973 + MGP_NODShiLtJ_P0088108 Lsm1 protein_coding protein_coding MGP_NODShiLtJ_T0005288.1 MGP_NODShiLtJ_G0004477.1 mouse_genomes_project 8 25583745 25604083 + 1700047A11Rik antisense antisense MGP_NODShiLtJ_T0005289.1 MGP_NODShiLtJ_G0004477.1 mouse_genomes_project 8 25583752 25590510 + 1700047A11Rik antisense antisense MGP_NODShiLtJ_T0089792.1 MGP_NODShiLtJ_G0033833.1 mouse_genomes_project 8 118275184 118277700 - MGP_NODShiLtJ_P0089792 B3gnt9 protein_coding protein_coding MGP_NODShiLtJ_T0089793.1 MGP_NODShiLtJ_G0033833.1 mouse_genomes_project 8 118275185 118277698 - MGP_NODShiLtJ_P0089793 B3gnt9 protein_coding protein_coding MGP_NODShiLtJ_T0089794.1 MGP_NODShiLtJ_G0033833.1 mouse_genomes_project 8 118276868 118277698 - MGP_NODShiLtJ_P0089794 B3gnt9 protein_coding protein_coding MGP_NODShiLtJ_T0089092.1 MGP_NODShiLtJ_G0033608.1 mouse_genomes_project 8 86688521 86703972 - MGP_NODShiLtJ_P0089092 Tmem184c protein_coding protein_coding MGP_NODShiLtJ_T0089093.1 MGP_NODShiLtJ_G0033608.1 mouse_genomes_project 8 86697016 86704017 - MGP_NODShiLtJ_P0089093 Tmem184c protein_coding protein_coding MGP_NODShiLtJ_T0089094.1 MGP_NODShiLtJ_G0033608.1 mouse_genomes_project 8 86700509 86703987 - MGP_NODShiLtJ_P0089094 Tmem184c protein_coding protein_coding MGP_NODShiLtJ_T0090176.1 MGP_NODShiLtJ_G0033971.1 mouse_genomes_project 8 131216338 131234395 + MGP_NODShiLtJ_P0090176 Atmin protein_coding protein_coding MGP_NODShiLtJ_T0089888.1 MGP_NODShiLtJ_G0033874.1 mouse_genomes_project 8 119068423 119074350 - MGP_NODShiLtJ_P0089888 Dpep3 protein_coding protein_coding MGP_NODShiLtJ_T0087818.1 MGP_NODShiLtJ_G0033184.1 mouse_genomes_project 8 11854769 11882078 + MGP_NODShiLtJ_P0087818 Tmem255b protein_coding protein_coding MGP_NODShiLtJ_T0087819.1 MGP_NODShiLtJ_G0033184.1 mouse_genomes_project 8 11854769 11882078 + MGP_NODShiLtJ_P0087819 Tmem255b protein_coding protein_coding MGP_NODShiLtJ_T0089723.1 MGP_NODShiLtJ_G0033804.1 mouse_genomes_project 8 117003436 117058144 + MGP_NODShiLtJ_P0089723 Bean1 protein_coding protein_coding MGP_NODShiLtJ_T0089724.1 MGP_NODShiLtJ_G0033804.1 mouse_genomes_project 8 117003436 117058144 + MGP_NODShiLtJ_P0089724 Bean1 protein_coding protein_coding MGP_NODShiLtJ_T0089725.1 MGP_NODShiLtJ_G0033804.1 mouse_genomes_project 8 117003436 117058144 + MGP_NODShiLtJ_P0089725 Bean1 protein_coding protein_coding MGP_NODShiLtJ_T0089726.1 MGP_NODShiLtJ_G0033804.1 mouse_genomes_project 8 117003436 117058144 + MGP_NODShiLtJ_P0089726 Bean1 protein_coding protein_coding MGP_NODShiLtJ_T0089033.1 MGP_NODShiLtJ_G0033586.1 mouse_genomes_project 8 80757200 80759824 + MGP_NODShiLtJ_P0089033 Klf2 protein_coding protein_coding MGP_NODShiLtJ_T0098460.1 MGP_NODShiLtJ_G0036860.1 mouse_genomes_project 8 136604224 136604891 - sense_intronic sense_intronic MGP_NODShiLtJ_T0089154.1 MGP_NODShiLtJ_G0033630.1 mouse_genomes_project 8 92496480 92752851 + MGP_NODShiLtJ_P0089154 Rnf150 protein_coding protein_coding MGP_NODShiLtJ_T0005324.1 MGP_NODShiLtJ_G0004507.1 mouse_genomes_project 8 118616124 118618495 + Gm38250 antisense antisense MGP_NODShiLtJ_T0005325.1 MGP_NODShiLtJ_G0004507.1 mouse_genomes_project 8 118616151 118631385 + Gm38250 antisense antisense MGP_NODShiLtJ_T0089077.1 MGP_NODShiLtJ_G0033604.1 mouse_genomes_project 8 84207982 84876644 + MGP_NODShiLtJ_P0089077 1700007B14Rik protein_coding protein_coding MGP_NODShiLtJ_T0089078.1 MGP_NODShiLtJ_G0033604.1 mouse_genomes_project 8 84208271 84876669 + MGP_NODShiLtJ_P0089078 1700007B14Rik protein_coding protein_coding MGP_NODShiLtJ_T0088661.1 MGP_NODShiLtJ_G0033471.1 mouse_genomes_project 8 77234512 77289538 - MGP_NODShiLtJ_P0088661 Lzts1 protein_coding protein_coding MGP_NODShiLtJ_T0088662.1 MGP_NODShiLtJ_G0033471.1 mouse_genomes_project 8 77237333 77242784 - MGP_NODShiLtJ_P0088662 Lzts1 protein_coding protein_coding MGP_NODShiLtJ_T0088663.1 MGP_NODShiLtJ_G0033471.1 mouse_genomes_project 8 77268060 77289528 - Lzts1 protein_coding processed_transcript MGP_NODShiLtJ_T0088664.1 MGP_NODShiLtJ_G0033471.1 mouse_genomes_project 8 77287466 77289518 - Lzts1 protein_coding processed_transcript MGP_NODShiLtJ_T0088665.1 MGP_NODShiLtJ_G0033471.1 mouse_genomes_project 8 77289026 77289502 - Lzts1 protein_coding retained_intron MGP_NODShiLtJ_T0088318.1 MGP_NODShiLtJ_G0033375.1 mouse_genomes_project 8 46089450 46090516 - MGP_NODShiLtJ_P0088318 protein_coding protein_coding MGP_NODShiLtJ_T0089942.1 MGP_NODShiLtJ_G0033895.1 mouse_genomes_project 8 120236911 120237897 - MGP_NODShiLtJ_P0089942 protein_coding protein_coding MGP_NODShiLtJ_T0088315.1 MGP_NODShiLtJ_G0033372.1 mouse_genomes_project 8 45675615 45688794 - MGP_NODShiLtJ_P0088315 Zfp42 protein_coding protein_coding MGP_NODShiLtJ_T0089877.1 MGP_NODShiLtJ_G0033868.1 mouse_genomes_project 8 118984463 118985920 + MGP_NODShiLtJ_P0089877 Nrn1l protein_coding protein_coding MGP_NODShiLtJ_T0089878.1 MGP_NODShiLtJ_G0033868.1 mouse_genomes_project 8 118984468 118985914 + MGP_NODShiLtJ_P0089878 Nrn1l protein_coding protein_coding MGP_NODShiLtJ_T0100839.1 MGP_NODShiLtJ_G0039233.1 mouse_genomes_project 8 106339953 106340088 - Gm26265 snoRNA snoRNA MGP_NODShiLtJ_T0005336.1 MGP_NODShiLtJ_G0004517.1 mouse_genomes_project 8 128684690 128687259 - Gm16117 antisense antisense MGP_NODShiLtJ_T0005332.1 MGP_NODShiLtJ_G0004513.1 mouse_genomes_project 8 124388361 124390201 + Gm15895 antisense antisense MGP_NODShiLtJ_T0090184.1 MGP_NODShiLtJ_G0033975.1 mouse_genomes_project 8 131395361 131439110 + MGP_NODShiLtJ_P0090184 Bco1 protein_coding protein_coding MGP_NODShiLtJ_T0090185.1 MGP_NODShiLtJ_G0033975.1 mouse_genomes_project 8 131395372 131436489 + MGP_NODShiLtJ_P0090185 Bco1 protein_coding protein_coding MGP_NODShiLtJ_T0090186.1 MGP_NODShiLtJ_G0033975.1 mouse_genomes_project 8 131395505 131438587 + MGP_NODShiLtJ_P0090186 Bco1 protein_coding protein_coding MGP_NODShiLtJ_T0015878.1 MGP_NODShiLtJ_G0013986.1 mouse_genomes_project 8 92200764 92201722 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090531.1 MGP_NODShiLtJ_G0034073.1 mouse_genomes_project 8 139141891 139257203 + MGP_NODShiLtJ_P0090531 Galnt2 protein_coding protein_coding MGP_NODShiLtJ_T0090532.1 MGP_NODShiLtJ_G0034073.1 mouse_genomes_project 8 139142008 139245821 + Galnt2 protein_coding processed_transcript MGP_NODShiLtJ_T0090533.1 MGP_NODShiLtJ_G0034073.1 mouse_genomes_project 8 139205536 139234159 + Galnt2 protein_coding processed_transcript MGP_NODShiLtJ_T0090534.1 MGP_NODShiLtJ_G0034073.1 mouse_genomes_project 8 139205799 139257205 + Galnt2 protein_coding processed_transcript MGP_NODShiLtJ_T0089618.1 MGP_NODShiLtJ_G0033767.1 mouse_genomes_project 8 105095216 105122932 - MGP_NODShiLtJ_P0089618 Fam192a protein_coding protein_coding MGP_NODShiLtJ_T0009019.1 MGP_NODShiLtJ_G0007247.1 mouse_genomes_project 8 50164370 50328546 - lincRNA lincRNA MGP_NODShiLtJ_T0015879.1 MGP_NODShiLtJ_G0013987.1 mouse_genomes_project 8 93031745 93032221 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005302.1 MGP_NODShiLtJ_G0004488.1 mouse_genomes_project 8 64437584 64438617 + Gm15882 antisense antisense MGP_NODShiLtJ_T0087802.1 MGP_NODShiLtJ_G0033178.1 mouse_genomes_project 8 11619541 11655692 - MGP_NODShiLtJ_P0087802 protein_coding protein_coding MGP_NODShiLtJ_T0087803.1 MGP_NODShiLtJ_G0033178.1 mouse_genomes_project 8 11634964 11655692 - MGP_NODShiLtJ_P0087803 protein_coding protein_coding MGP_NODShiLtJ_T0087804.1 MGP_NODShiLtJ_G0033178.1 mouse_genomes_project 8 11641296 11642120 - protein_coding retained_intron MGP_NODShiLtJ_T0087805.1 MGP_NODShiLtJ_G0033178.1 mouse_genomes_project 8 11641544 11655601 - MGP_NODShiLtJ_P0087805 protein_coding protein_coding MGP_NODShiLtJ_T0087806.1 MGP_NODShiLtJ_G0033178.1 mouse_genomes_project 8 11641676 11655626 - MGP_NODShiLtJ_P0087806 protein_coding protein_coding MGP_NODShiLtJ_T0087945.1 MGP_NODShiLtJ_G0033246.1 mouse_genomes_project 8 21057833 21059916 + MGP_NODShiLtJ_P0087945 Defb13 protein_coding protein_coding MGP_NODShiLtJ_T0009113.1 MGP_NODShiLtJ_G0007315.1 mouse_genomes_project 8 136106721 136107123 + Gm26784 lincRNA lincRNA MGP_NODShiLtJ_T0015890.1 MGP_NODShiLtJ_G0013998.1 mouse_genomes_project 8 111763566 111764066 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100807.1 MGP_NODShiLtJ_G0039201.1 mouse_genomes_project 8 40545259 40545391 - Gm23128 snoRNA snoRNA MGP_NODShiLtJ_T0089271.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94476112 94482724 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089272.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94476124 94476926 + Trmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0089273.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94476144 94483110 + MGP_NODShiLtJ_P0089273 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089274.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94480648 94492916 + MGP_NODShiLtJ_P0089274 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089275.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481029 94492895 + MGP_NODShiLtJ_P0089275 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089276.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481039 94482527 + Trmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0089277.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481039 94483158 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089278.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481039 94488635 + MGP_NODShiLtJ_P0089278 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089279.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481046 94492894 + MGP_NODShiLtJ_P0089279 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089280.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481051 94490025 + MGP_NODShiLtJ_P0089280 Trmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089281.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481054 94488406 + MGP_NODShiLtJ_P0089281 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089282.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481065 94492916 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089283.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481065 94483016 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089284.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481066 94482599 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089285.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481067 94481761 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089286.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481068 94482596 + Trmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0089287.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481068 94488578 + MGP_NODShiLtJ_P0089287 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089288.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481068 94488554 + MGP_NODShiLtJ_P0089288 Trmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089289.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481071 94484663 + Trmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0089290.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481250 94492893 + MGP_NODShiLtJ_P0089290 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089291.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481263 94488344 + MGP_NODShiLtJ_P0089291 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089292.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94481418 94488635 + Trmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0089293.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94482176 94490232 + Trmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0089294.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94488026 94490536 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089295.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94489943 94490621 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089296.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94490074 94491360 + MGP_NODShiLtJ_P0089296 Trmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089297.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94490421 94491054 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089298.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94491496 94492894 + MGP_NODShiLtJ_P0089298 Trmt1 protein_coding protein_coding MGP_NODShiLtJ_T0089299.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94492178 94492894 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089300.1 MGP_NODShiLtJ_G0033671.1 mouse_genomes_project 8 94492288 94492759 + Trmt1 protein_coding retained_intron MGP_NODShiLtJ_T0089338.1 MGP_NODShiLtJ_G0033683.1 mouse_genomes_project 8 94706151 94709521 + MGP_NODShiLtJ_P0089338 Klf1 protein_coding protein_coding MGP_NODShiLtJ_T0018286.1 MGP_NODShiLtJ_G0015573.1 mouse_genomes_project 8 17534471 17560872 - Gm16725 processed_transcript processed_transcript MGP_NODShiLtJ_T0087658.1 MGP_NODShiLtJ_G0033135.1 mouse_genomes_project 8 1296805 1298432 - MGP_NODShiLtJ_P0087658 Ctxn1 protein_coding protein_coding MGP_NODShiLtJ_T0010843.1 MGP_NODShiLtJ_G0008976.1 mouse_genomes_project 8 11524005 11524066 + Mir7065 miRNA miRNA MGP_NODShiLtJ_T0090101.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125221458 125349158 + MGP_NODShiLtJ_P0090101 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090102.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125221989 125349468 + MGP_NODShiLtJ_P0090102 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090103.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125221989 125349468 + MGP_NODShiLtJ_P0090103 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090104.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125223178 125345891 + MGP_NODShiLtJ_P0090104 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090105.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125223780 125347216 + MGP_NODShiLtJ_P0090105 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090106.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125224058 125346411 + MGP_NODShiLtJ_P0090106 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090107.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125224401 125345374 + MGP_NODShiLtJ_P0090107 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090108.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125224425 125345939 + MGP_NODShiLtJ_P0090108 Znrf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090109.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125225281 125346009 + MGP_NODShiLtJ_P0090109 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090110.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125225281 125349468 + MGP_NODShiLtJ_P0090110 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090111.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125225403 125326969 + Znrf1 protein_coding processed_transcript MGP_NODShiLtJ_T0090112.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125228199 125345102 + MGP_NODShiLtJ_P0090112 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0090113.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125274976 125324401 + Znrf1 protein_coding processed_transcript MGP_NODShiLtJ_T0090114.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125324352 125346400 + MGP_NODShiLtJ_P0090114 Znrf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090115.1 MGP_NODShiLtJ_G0033945.1 mouse_genomes_project 8 125326900 125345213 + MGP_NODShiLtJ_P0090115 Znrf1 protein_coding protein_coding MGP_NODShiLtJ_T0088968.1 MGP_NODShiLtJ_G0033569.1 mouse_genomes_project 8 79969210 80016880 - MGP_NODShiLtJ_P0088968 Unc13a protein_coding protein_coding MGP_NODShiLtJ_T0088969.1 MGP_NODShiLtJ_G0033569.1 mouse_genomes_project 8 79973847 80016859 - MGP_NODShiLtJ_P0088969 Unc13a protein_coding protein_coding MGP_NODShiLtJ_T0088970.1 MGP_NODShiLtJ_G0033569.1 mouse_genomes_project 8 79979432 79986463 - MGP_NODShiLtJ_P0088970 Unc13a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088971.1 MGP_NODShiLtJ_G0033569.1 mouse_genomes_project 8 79979698 79987634 - Unc13a protein_coding retained_intron MGP_NODShiLtJ_T0088972.1 MGP_NODShiLtJ_G0033569.1 mouse_genomes_project 8 79986525 79991017 - MGP_NODShiLtJ_P0088972 Unc13a protein_coding protein_coding MGP_NODShiLtJ_T0088973.1 MGP_NODShiLtJ_G0033569.1 mouse_genomes_project 8 79998670 80003378 - MGP_NODShiLtJ_P0088973 Unc13a protein_coding protein_coding MGP_NODShiLtJ_T0088974.1 MGP_NODShiLtJ_G0033569.1 mouse_genomes_project 8 80005223 80016864 - Unc13a protein_coding retained_intron MGP_NODShiLtJ_T0088975.1 MGP_NODShiLtJ_G0033569.1 mouse_genomes_project 8 80005228 80012962 - Unc13a protein_coding retained_intron MGP_NODShiLtJ_T0088180.1 MGP_NODShiLtJ_G0033330.1 mouse_genomes_project 8 34129413 34151662 + MGP_NODShiLtJ_P0088180 Ppp2cb protein_coding protein_coding MGP_NODShiLtJ_T0088588.1 MGP_NODShiLtJ_G0033450.1 mouse_genomes_project 8 72454665 72475161 + MGP_NODShiLtJ_P0088588 Tmem192 protein_coding protein_coding MGP_NODShiLtJ_T0088589.1 MGP_NODShiLtJ_G0033450.1 mouse_genomes_project 8 72454665 72475161 + MGP_NODShiLtJ_P0088589 Tmem192 protein_coding protein_coding MGP_NODShiLtJ_T0008988.1 MGP_NODShiLtJ_G0007223.1 mouse_genomes_project 8 10002393 10012366 + 1700128E19Rik lincRNA lincRNA MGP_NODShiLtJ_T0102231.1 MGP_NODShiLtJ_G0040397.1 mouse_genomes_project 8 111240872 111244004 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0087855.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 12591001 13389152 + MGP_NODShiLtJ_P0087855 Dlgap2 protein_coding protein_coding MGP_NODShiLtJ_T0087856.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 12591011 13389724 + MGP_NODShiLtJ_P0087856 Dlgap2 protein_coding protein_coding MGP_NODShiLtJ_T0087857.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 12677450 13388752 + MGP_NODShiLtJ_P0087857 Dlgap2 protein_coding protein_coding MGP_NODShiLtJ_T0087858.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 12677450 13389152 + MGP_NODShiLtJ_P0087858 Dlgap2 protein_coding protein_coding MGP_NODShiLtJ_T0087859.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 12901606 13032637 + Dlgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0087860.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 12901820 13058012 + Dlgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0087861.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 12901868 13373081 + Dlgap2 protein_coding retained_intron MGP_NODShiLtJ_T0087862.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 13275601 13294496 + Dlgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0087864.1 MGP_NODShiLtJ_G0033201.1 mouse_genomes_project 8 13312377 13389442 + Dlgap2 protein_coding processed_transcript MGP_NODShiLtJ_T0087968.1 MGP_NODShiLtJ_G0033256.1 mouse_genomes_project 8 21420344 21511620 + MGP_NODShiLtJ_P0087968 Tpte protein_coding protein_coding MGP_NODShiLtJ_T0090129.1 MGP_NODShiLtJ_G0033955.1 mouse_genomes_project 8 125741125 125768550 - MGP_NODShiLtJ_P0090129 Adat1 protein_coding protein_coding MGP_NODShiLtJ_T0090130.1 MGP_NODShiLtJ_G0033955.1 mouse_genomes_project 8 125743609 125768586 - MGP_NODShiLtJ_P0090130 Adat1 protein_coding protein_coding MGP_NODShiLtJ_T0089415.1 MGP_NODShiLtJ_G0033703.1 mouse_genomes_project 8 95056959 95057898 + MGP_NODShiLtJ_P0089415 Olfr371 protein_coding protein_coding MGP_NODShiLtJ_T0089991.1 MGP_NODShiLtJ_G0033910.1 mouse_genomes_project 8 123047655 123055804 + MGP_NODShiLtJ_P0089991 Txnl4b protein_coding protein_coding MGP_NODShiLtJ_T0089992.1 MGP_NODShiLtJ_G0033910.1 mouse_genomes_project 8 123050640 123055276 + MGP_NODShiLtJ_P0089992 Txnl4b protein_coding protein_coding MGP_NODShiLtJ_T0015875.1 MGP_NODShiLtJ_G0013983.1 mouse_genomes_project 8 90689596 90690569 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090588.1 MGP_NODShiLtJ_G0034092.1 mouse_genomes_project 8 140752030 140768441 + Ntpcr protein_coding processed_transcript MGP_NODShiLtJ_T0090589.1 MGP_NODShiLtJ_G0034092.1 mouse_genomes_project 8 140752095 140770949 + MGP_NODShiLtJ_P0090589 Ntpcr protein_coding protein_coding MGP_NODShiLtJ_T0090590.1 MGP_NODShiLtJ_G0034092.1 mouse_genomes_project 8 140752099 140761281 + Ntpcr protein_coding processed_transcript MGP_NODShiLtJ_T0090591.1 MGP_NODShiLtJ_G0034092.1 mouse_genomes_project 8 140755162 140771174 + Ntpcr protein_coding processed_transcript MGP_NODShiLtJ_T0090592.1 MGP_NODShiLtJ_G0034092.1 mouse_genomes_project 8 140757346 140771375 + MGP_NODShiLtJ_P0090592 Ntpcr protein_coding protein_coding MGP_NODShiLtJ_T0090593.1 MGP_NODShiLtJ_G0034092.1 mouse_genomes_project 8 140757376 140759474 + Ntpcr protein_coding retained_intron MGP_NODShiLtJ_T0090594.1 MGP_NODShiLtJ_G0034092.1 mouse_genomes_project 8 140757381 140762324 + MGP_NODShiLtJ_P0090594 Ntpcr protein_coding protein_coding MGP_NODShiLtJ_T0090595.1 MGP_NODShiLtJ_G0034092.1 mouse_genomes_project 8 140758979 140771137 + MGP_NODShiLtJ_P0090595 Ntpcr protein_coding protein_coding MGP_NODShiLtJ_T0009028.1 MGP_NODShiLtJ_G0007255.1 mouse_genomes_project 8 76234233 76237962 - lincRNA lincRNA MGP_NODShiLtJ_T0089813.1 MGP_NODShiLtJ_G0033843.1 mouse_genomes_project 8 118354943 118357647 + MGP_NODShiLtJ_P0089813 Tmem208 protein_coding protein_coding MGP_NODShiLtJ_T0089814.1 MGP_NODShiLtJ_G0033843.1 mouse_genomes_project 8 118354951 118357645 + MGP_NODShiLtJ_P0089814 Tmem208 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089815.1 MGP_NODShiLtJ_G0033843.1 mouse_genomes_project 8 118354977 118357642 + MGP_NODShiLtJ_P0089815 Tmem208 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089816.1 MGP_NODShiLtJ_G0033843.1 mouse_genomes_project 8 118354984 118366041 + MGP_NODShiLtJ_P0089816 Tmem208 protein_coding protein_coding MGP_NODShiLtJ_T0089817.1 MGP_NODShiLtJ_G0033843.1 mouse_genomes_project 8 118355044 118365623 + MGP_NODShiLtJ_P0089817 Tmem208 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002285.1 MGP_NODShiLtJ_G0002196.1 mouse_genomes_project 8 95282005 95282635 + TEC TEC MGP_NODShiLtJ_T0002286.1 MGP_NODShiLtJ_G0002196.1 mouse_genomes_project 8 95282005 95282643 + TEC TEC MGP_NODShiLtJ_T0102224.1 MGP_NODShiLtJ_G0040390.1 mouse_genomes_project 8 18456353 18457292 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0089432.1 MGP_NODShiLtJ_G0033711.1 mouse_genomes_project 8 95587965 95726250 - MGP_NODShiLtJ_P0089432 Itfg1 protein_coding protein_coding MGP_NODShiLtJ_T0088836.1 MGP_NODShiLtJ_G0033518.1 mouse_genomes_project 8 78854356 78857164 + MGP_NODShiLtJ_P0088836 Isyna1 protein_coding protein_coding MGP_NODShiLtJ_T0015862.1 MGP_NODShiLtJ_G0013970.1 mouse_genomes_project 8 73398153 73398438 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005299.1 MGP_NODShiLtJ_G0004486.1 mouse_genomes_project 8 59508783 59551654 - 5330439A09Rik antisense antisense MGP_NODShiLtJ_T0090496.1 MGP_NODShiLtJ_G0034057.1 mouse_genomes_project 8 138182348 138211399 + MGP_NODShiLtJ_P0090496 Tcf25 protein_coding protein_coding MGP_NODShiLtJ_T0090497.1 MGP_NODShiLtJ_G0034057.1 mouse_genomes_project 8 138182359 138213680 + MGP_NODShiLtJ_P0090497 Tcf25 protein_coding protein_coding MGP_NODShiLtJ_T0018295.1 MGP_NODShiLtJ_G0015579.1 mouse_genomes_project 8 48443635 48461175 + processed_transcript processed_transcript MGP_NODShiLtJ_T0089189.1 MGP_NODShiLtJ_G0033644.1 mouse_genomes_project 8 93426423 93434564 + MGP_NODShiLtJ_P0089189 Ddx39 protein_coding protein_coding MGP_NODShiLtJ_T0089190.1 MGP_NODShiLtJ_G0033644.1 mouse_genomes_project 8 93426514 93434490 + Ddx39 protein_coding retained_intron MGP_NODShiLtJ_T0089191.1 MGP_NODShiLtJ_G0033644.1 mouse_genomes_project 8 93426514 93434491 + MGP_NODShiLtJ_P0089191 Ddx39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089192.1 MGP_NODShiLtJ_G0033644.1 mouse_genomes_project 8 93426518 93438130 + MGP_NODShiLtJ_P0089192 Ddx39 protein_coding protein_coding MGP_NODShiLtJ_T0089193.1 MGP_NODShiLtJ_G0033644.1 mouse_genomes_project 8 93426794 93434564 + MGP_NODShiLtJ_P0089193 Ddx39 protein_coding protein_coding MGP_NODShiLtJ_T0089194.1 MGP_NODShiLtJ_G0033644.1 mouse_genomes_project 8 93430828 93432506 + Ddx39 protein_coding retained_intron MGP_NODShiLtJ_T0087692.1 MGP_NODShiLtJ_G0033145.1 mouse_genomes_project 8 6646168 6689393 - MGP_NODShiLtJ_P0087692 Efnb2 protein_coding protein_coding MGP_NODShiLtJ_T0087693.1 MGP_NODShiLtJ_G0033145.1 mouse_genomes_project 8 6649331 6667921 - MGP_NODShiLtJ_P0087693 Efnb2 protein_coding protein_coding MGP_NODShiLtJ_T0090374.1 MGP_NODShiLtJ_G0034025.1 mouse_genomes_project 8 137055892 137059623 - MGP_NODShiLtJ_P0090374 Trhr2 protein_coding protein_coding MGP_NODShiLtJ_T0089632.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105348337 105370482 - MGP_NODShiLtJ_P0089632 Ciapin1 protein_coding protein_coding MGP_NODShiLtJ_T0089633.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105351076 105356959 - MGP_NODShiLtJ_P0089633 Ciapin1 protein_coding protein_coding MGP_NODShiLtJ_T0089634.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105351450 105354419 - Ciapin1 protein_coding retained_intron MGP_NODShiLtJ_T0089635.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105351536 105356965 - Ciapin1 protein_coding processed_transcript MGP_NODShiLtJ_T0089636.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105352226 105364803 - MGP_NODShiLtJ_P0089636 Ciapin1 protein_coding protein_coding MGP_NODShiLtJ_T0089637.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105354861 105356963 - Ciapin1 protein_coding retained_intron MGP_NODShiLtJ_T0089638.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105355444 105362758 - Ciapin1 protein_coding processed_transcript MGP_NODShiLtJ_T0089639.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105358318 105370389 - MGP_NODShiLtJ_P0089639 Ciapin1 protein_coding protein_coding MGP_NODShiLtJ_T0089640.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105362709 105370385 - Ciapin1 protein_coding processed_transcript MGP_NODShiLtJ_T0089641.1 MGP_NODShiLtJ_G0033774.1 mouse_genomes_project 8 105364796 105370166 - Ciapin1 protein_coding processed_transcript MGP_NODShiLtJ_T0090168.1 MGP_NODShiLtJ_G0033968.1 mouse_genomes_project 8 130806010 130988591 - MGP_NODShiLtJ_P0090168 Cdyl2 protein_coding protein_coding MGP_NODShiLtJ_T0089663.1 MGP_NODShiLtJ_G0033784.1 mouse_genomes_project 8 105654463 105690625 - MGP_NODShiLtJ_P0089663 Kifc3 protein_coding protein_coding MGP_NODShiLtJ_T0089664.1 MGP_NODShiLtJ_G0033784.1 mouse_genomes_project 8 105654469 105690691 - MGP_NODShiLtJ_P0089664 Kifc3 protein_coding protein_coding MGP_NODShiLtJ_T0087994.1 MGP_NODShiLtJ_G0033267.1 mouse_genomes_project 8 22051179 22139847 + MGP_NODShiLtJ_P0087994 Kat6a protein_coding protein_coding MGP_NODShiLtJ_T0087995.1 MGP_NODShiLtJ_G0033267.1 mouse_genomes_project 8 22051550 22139847 + MGP_NODShiLtJ_P0087995 Kat6a protein_coding protein_coding MGP_NODShiLtJ_T0087996.1 MGP_NODShiLtJ_G0033267.1 mouse_genomes_project 8 22105692 22115494 + Kat6a protein_coding processed_transcript MGP_NODShiLtJ_T0099534.1 MGP_NODShiLtJ_G0037928.1 mouse_genomes_project 8 11684918 11685021 - Gm25014 snRNA snRNA MGP_NODShiLtJ_T0090385.1 MGP_NODShiLtJ_G0034027.1 mouse_genomes_project 8 137126561 137128166 + MGP_NODShiLtJ_P0090385 Il17c protein_coding protein_coding MGP_NODShiLtJ_T0088579.1 MGP_NODShiLtJ_G0033447.1 mouse_genomes_project 8 72082405 72186792 - MGP_NODShiLtJ_P0088579 Cpe protein_coding protein_coding MGP_NODShiLtJ_T0005329.1 MGP_NODShiLtJ_G0004511.1 mouse_genomes_project 8 123372615 123382841 - Gm17344 antisense antisense MGP_NODShiLtJ_T0005330.1 MGP_NODShiLtJ_G0004511.1 mouse_genomes_project 8 123374356 123382864 - Gm17344 antisense antisense MGP_NODShiLtJ_T0087760.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11255050 11261395 + MGP_NODShiLtJ_P0087760 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087761.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11255071 11406106 + MGP_NODShiLtJ_P0087761 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087762.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11255192 11271168 + Mcf2l protein_coding processed_transcript MGP_NODShiLtJ_T0087763.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11296315 11407958 + MGP_NODShiLtJ_P0087763 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087764.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11296952 11407562 + MGP_NODShiLtJ_P0087764 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087765.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11296970 11377353 + Mcf2l protein_coding processed_transcript MGP_NODShiLtJ_T0087766.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11297034 11406362 + MGP_NODShiLtJ_P0087766 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087767.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11308906 11405230 + MGP_NODShiLtJ_P0087767 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087768.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11332693 11373344 + Mcf2l protein_coding retained_intron MGP_NODShiLtJ_T0087769.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11332727 11401084 + MGP_NODShiLtJ_P0087769 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087770.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11332888 11407559 + MGP_NODShiLtJ_P0087770 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087771.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11334190 11406328 + MGP_NODShiLtJ_P0087771 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087772.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11334258 11407554 + MGP_NODShiLtJ_P0087772 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087773.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11369467 11404521 + MGP_NODShiLtJ_P0087773 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087774.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11369472 11398601 + MGP_NODShiLtJ_P0087774 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087775.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11369487 11407558 + MGP_NODShiLtJ_P0087775 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087776.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11398548 11407580 + MGP_NODShiLtJ_P0087776 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087777.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11398564 11405147 + MGP_NODShiLtJ_P0087777 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087778.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11398872 11404492 + MGP_NODShiLtJ_P0087778 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087779.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11400116 11402420 + Mcf2l protein_coding retained_intron MGP_NODShiLtJ_T0087780.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11400615 11406052 + MGP_NODShiLtJ_P0087780 Mcf2l protein_coding protein_coding MGP_NODShiLtJ_T0087781.1 MGP_NODShiLtJ_G0033170.1 mouse_genomes_project 8 11404230 11406060 + Mcf2l protein_coding retained_intron MGP_NODShiLtJ_T0090564.1 MGP_NODShiLtJ_G0034082.1 mouse_genomes_project 8 139749927 139795099 + MGP_NODShiLtJ_P0090564 Trim67 protein_coding protein_coding MGP_NODShiLtJ_T0090565.1 MGP_NODShiLtJ_G0034082.1 mouse_genomes_project 8 139750000 139795110 + MGP_NODShiLtJ_P0090565 Trim67 protein_coding protein_coding MGP_NODShiLtJ_T0089985.1 MGP_NODShiLtJ_G0033905.1 mouse_genomes_project 8 120724074 120854239 + MGP_NODShiLtJ_P0089985 Wwp2 protein_coding protein_coding MGP_NODShiLtJ_T0089117.1 MGP_NODShiLtJ_G0033615.1 mouse_genomes_project 8 88428227 88473557 - MGP_NODShiLtJ_P0089117 1700011L22Rik protein_coding protein_coding MGP_NODShiLtJ_T0088666.1 MGP_NODShiLtJ_G0033472.1 mouse_genomes_project 8 77315722 77352623 + MGP_NODShiLtJ_P0088666 Zfp930 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088667.1 MGP_NODShiLtJ_G0033472.1 mouse_genomes_project 8 77348189 77351062 + MGP_NODShiLtJ_P0088667 Zfp930 protein_coding protein_coding MGP_NODShiLtJ_T0010881.1 MGP_NODShiLtJ_G0009014.1 mouse_genomes_project 8 93962926 93963009 - Mir3074-2 miRNA miRNA MGP_NODShiLtJ_T0090389.1 MGP_NODShiLtJ_G0034031.1 mouse_genomes_project 8 137174699 137186804 - MGP_NODShiLtJ_P0090389 Rnf166 protein_coding protein_coding MGP_NODShiLtJ_T0090390.1 MGP_NODShiLtJ_G0034031.1 mouse_genomes_project 8 137175413 137176779 - Rnf166 protein_coding retained_intron MGP_NODShiLtJ_T0090391.1 MGP_NODShiLtJ_G0034031.1 mouse_genomes_project 8 137176560 137186428 - Rnf166 protein_coding processed_transcript MGP_NODShiLtJ_T0011600.1 MGP_NODShiLtJ_G0009733.1 mouse_genomes_project 8 5413770 5413972 + Gm27545 misc_RNA misc_RNA MGP_NODShiLtJ_T0099576.1 MGP_NODShiLtJ_G0037970.1 mouse_genomes_project 8 136519591 136519698 + Gm24283 snRNA snRNA MGP_NODShiLtJ_T0089216.1 MGP_NODShiLtJ_G0033650.1 mouse_genomes_project 8 93738296 93739509 + MGP_NODShiLtJ_P0089216 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009023.1 MGP_NODShiLtJ_G0007251.1 mouse_genomes_project 8 67585478 67587950 + B230317F23Rik lincRNA lincRNA MGP_NODShiLtJ_T0087586.1 MGP_NODShiLtJ_G0033116.1 mouse_genomes_project 8 603368 606049 + MGP_NODShiLtJ_P0087586 Pet100 protein_coding protein_coding MGP_NODShiLtJ_T0090339.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136485750 136518735 - MGP_NODShiLtJ_P0090339 Klhdc4 protein_coding protein_coding MGP_NODShiLtJ_T0090340.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136485770 136518706 - Klhdc4 protein_coding retained_intron MGP_NODShiLtJ_T0090341.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136485781 136486866 - Klhdc4 protein_coding retained_intron MGP_NODShiLtJ_T0090342.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136485984 136518646 - MGP_NODShiLtJ_P0090342 Klhdc4 protein_coding protein_coding MGP_NODShiLtJ_T0090343.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136485984 136518646 - MGP_NODShiLtJ_P0090343 Klhdc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090344.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136485984 136518646 - MGP_NODShiLtJ_P0090344 Klhdc4 protein_coding protein_coding MGP_NODShiLtJ_T0090345.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136487606 136494672 - Klhdc4 protein_coding processed_transcript MGP_NODShiLtJ_T0090346.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136488899 136491034 - Klhdc4 protein_coding retained_intron MGP_NODShiLtJ_T0090347.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136515700 136518675 - Klhdc4 protein_coding retained_intron MGP_NODShiLtJ_T0090348.1 MGP_NODShiLtJ_G0034020.1 mouse_genomes_project 8 136515994 136518670 - MGP_NODShiLtJ_P0090348 Klhdc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097845.1 MGP_NODShiLtJ_G0036257.1 mouse_genomes_project 8 137308676 137309062 + pseudogene pseudogene MGP_NODShiLtJ_T0089510.1 MGP_NODShiLtJ_G0033733.1 mouse_genomes_project 8 101360145 101417512 + MGP_NODShiLtJ_P0089510 Rbl2 protein_coding protein_coding MGP_NODShiLtJ_T0089511.1 MGP_NODShiLtJ_G0033733.1 mouse_genomes_project 8 101360182 101370073 + Rbl2 protein_coding retained_intron MGP_NODShiLtJ_T0089512.1 MGP_NODShiLtJ_G0033733.1 mouse_genomes_project 8 101399722 101408641 + Rbl2 protein_coding retained_intron MGP_NODShiLtJ_T0089513.1 MGP_NODShiLtJ_G0033733.1 mouse_genomes_project 8 101399759 101407587 + Rbl2 protein_coding processed_transcript MGP_NODShiLtJ_T0089515.1 MGP_NODShiLtJ_G0033733.1 mouse_genomes_project 8 101405773 101409381 + Rbl2 protein_coding retained_intron MGP_NODShiLtJ_T0089516.1 MGP_NODShiLtJ_G0033733.1 mouse_genomes_project 8 101407192 101409321 + Rbl2 protein_coding retained_intron MGP_NODShiLtJ_T0089517.1 MGP_NODShiLtJ_G0033733.1 mouse_genomes_project 8 101408665 101409643 + Rbl2 protein_coding retained_intron MGP_NODShiLtJ_T0005275.1 MGP_NODShiLtJ_G0004468.1 mouse_genomes_project 8 11280205 11296679 - Gm15351 antisense antisense MGP_NODShiLtJ_T0005276.1 MGP_NODShiLtJ_G0004468.1 mouse_genomes_project 8 11293585 11296818 - Gm15351 antisense antisense MGP_NODShiLtJ_T0005277.1 MGP_NODShiLtJ_G0004468.1 mouse_genomes_project 8 11295641 11296533 - Gm15351 antisense antisense MGP_NODShiLtJ_T0090177.1 MGP_NODShiLtJ_G0033972.1 mouse_genomes_project 8 131244285 131256136 - MGP_NODShiLtJ_P0090177 1700030J22Rik protein_coding protein_coding MGP_NODShiLtJ_T0089540.1 MGP_NODShiLtJ_G0033741.1 mouse_genomes_project 8 103239357 103307716 + MGP_NODShiLtJ_P0089540 Lpcat2 protein_coding protein_coding MGP_NODShiLtJ_T0089541.1 MGP_NODShiLtJ_G0033741.1 mouse_genomes_project 8 103239487 103256493 + Lpcat2 protein_coding processed_transcript MGP_NODShiLtJ_T0089543.1 MGP_NODShiLtJ_G0033741.1 mouse_genomes_project 8 103294764 103306477 + Lpcat2 protein_coding processed_transcript MGP_NODShiLtJ_T0089674.1 MGP_NODShiLtJ_G0033786.1 mouse_genomes_project 8 105864465 105867050 + MGP_NODShiLtJ_P0089674 Tepp protein_coding protein_coding MGP_NODShiLtJ_T0089675.1 MGP_NODShiLtJ_G0033786.1 mouse_genomes_project 8 105864485 105874443 + MGP_NODShiLtJ_P0089675 Tepp protein_coding protein_coding MGP_NODShiLtJ_T0089676.1 MGP_NODShiLtJ_G0033786.1 mouse_genomes_project 8 105865497 105875229 + MGP_NODShiLtJ_P0089676 Tepp protein_coding protein_coding MGP_NODShiLtJ_T0089677.1 MGP_NODShiLtJ_G0033786.1 mouse_genomes_project 8 105865501 105875229 + MGP_NODShiLtJ_P0089677 Tepp protein_coding protein_coding MGP_NODShiLtJ_T0089678.1 MGP_NODShiLtJ_G0033786.1 mouse_genomes_project 8 105874337 105880223 + Tepp protein_coding retained_intron MGP_NODShiLtJ_T0089679.1 MGP_NODShiLtJ_G0033786.1 mouse_genomes_project 8 105874395 105880111 + MGP_NODShiLtJ_P0089679 Tepp protein_coding protein_coding MGP_NODShiLtJ_T0088312.1 MGP_NODShiLtJ_G0033369.1 mouse_genomes_project 8 43268893 43289524 - MGP_NODShiLtJ_P0088312 Frg1 protein_coding protein_coding MGP_NODShiLtJ_T0098089.1 MGP_NODShiLtJ_G0036501.1 mouse_genomes_project 8 2519793 2519912 - n-R5s94 rRNA rRNA MGP_NODShiLtJ_T0089925.1 MGP_NODShiLtJ_G0033887.1 mouse_genomes_project 8 119657330 119710452 + MGP_NODShiLtJ_P0089925 Cdh3 protein_coding protein_coding MGP_NODShiLtJ_T0088550.1 MGP_NODShiLtJ_G0033440.1 mouse_genomes_project 8 68158276 68175041 + MGP_NODShiLtJ_P0088550 Cbr4 protein_coding protein_coding MGP_NODShiLtJ_T0088551.1 MGP_NODShiLtJ_G0033440.1 mouse_genomes_project 8 68158277 68162118 + MGP_NODShiLtJ_P0088551 Cbr4 protein_coding protein_coding MGP_NODShiLtJ_T0088552.1 MGP_NODShiLtJ_G0033440.1 mouse_genomes_project 8 68158297 68162436 + Cbr4 protein_coding retained_intron MGP_NODShiLtJ_T0088553.1 MGP_NODShiLtJ_G0033440.1 mouse_genomes_project 8 68158311 68174888 + Cbr4 protein_coding retained_intron MGP_NODShiLtJ_T0088554.1 MGP_NODShiLtJ_G0033440.1 mouse_genomes_project 8 68161940 68174888 + Cbr4 protein_coding retained_intron MGP_NODShiLtJ_T0088555.1 MGP_NODShiLtJ_G0033440.1 mouse_genomes_project 8 68166399 68174948 + Cbr4 protein_coding retained_intron MGP_NODShiLtJ_T0087613.1 MGP_NODShiLtJ_G0033122.1 mouse_genomes_project 8 667553 679579 - MGP_NODShiLtJ_P0087613 Fcer2a protein_coding protein_coding MGP_NODShiLtJ_T0088954.1 MGP_NODShiLtJ_G0033566.1 mouse_genomes_project 8 79935719 79939813 + MGP_NODShiLtJ_P0088954 Pgls protein_coding protein_coding MGP_NODShiLtJ_T0088955.1 MGP_NODShiLtJ_G0033566.1 mouse_genomes_project 8 79935727 79944635 + MGP_NODShiLtJ_P0088955 Pgls protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088956.1 MGP_NODShiLtJ_G0033566.1 mouse_genomes_project 8 79935754 79939209 + Pgls protein_coding retained_intron MGP_NODShiLtJ_T0088957.1 MGP_NODShiLtJ_G0033566.1 mouse_genomes_project 8 79935780 79938655 + MGP_NODShiLtJ_P0088957 Pgls protein_coding protein_coding MGP_NODShiLtJ_T0088958.1 MGP_NODShiLtJ_G0033566.1 mouse_genomes_project 8 79935834 79939813 + MGP_NODShiLtJ_P0088958 Pgls protein_coding protein_coding MGP_NODShiLtJ_T0088630.1 MGP_NODShiLtJ_G0033466.1 mouse_genomes_project 8 76393140 76805820 - MGP_NODShiLtJ_P0088630 Csgalnact1 protein_coding protein_coding MGP_NODShiLtJ_T0088631.1 MGP_NODShiLtJ_G0033466.1 mouse_genomes_project 8 76394323 76805788 - MGP_NODShiLtJ_P0088631 Csgalnact1 protein_coding protein_coding MGP_NODShiLtJ_T0088632.1 MGP_NODShiLtJ_G0033466.1 mouse_genomes_project 8 76433357 76805776 - MGP_NODShiLtJ_P0088632 Csgalnact1 protein_coding protein_coding MGP_NODShiLtJ_T0088633.1 MGP_NODShiLtJ_G0033466.1 mouse_genomes_project 8 76521683 76805789 - Csgalnact1 protein_coding processed_transcript MGP_NODShiLtJ_T0088634.1 MGP_NODShiLtJ_G0033466.1 mouse_genomes_project 8 76626891 76805788 - Csgalnact1 protein_coding processed_transcript MGP_NODShiLtJ_T0088635.1 MGP_NODShiLtJ_G0033466.1 mouse_genomes_project 8 76626990 76805789 - Csgalnact1 protein_coding processed_transcript MGP_NODShiLtJ_T0088636.1 MGP_NODShiLtJ_G0033466.1 mouse_genomes_project 8 76718608 76805789 - Csgalnact1 protein_coding processed_transcript MGP_NODShiLtJ_T0088227.1 MGP_NODShiLtJ_G0033347.1 mouse_genomes_project 8 36588191 36590044 - MGP_NODShiLtJ_P0088227 Cldn23 protein_coding protein_coding MGP_NODShiLtJ_T0089924.1 MGP_NODShiLtJ_G0033886.1 mouse_genomes_project 8 119646770 119653760 + MGP_NODShiLtJ_P0089924 6030452D12Rik protein_coding protein_coding MGP_NODShiLtJ_T0089879.1 MGP_NODShiLtJ_G0033869.1 mouse_genomes_project 8 118991333 119025163 + MGP_NODShiLtJ_P0089879 Pskh1 protein_coding protein_coding MGP_NODShiLtJ_T0100810.1 MGP_NODShiLtJ_G0039204.1 mouse_genomes_project 8 48289124 48289261 - Gm23604 snoRNA snoRNA MGP_NODShiLtJ_T0015825.1 MGP_NODShiLtJ_G0013933.1 mouse_genomes_project 8 11357017 11357221 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089915.1 MGP_NODShiLtJ_G0033883.1 mouse_genomes_project 8 119340805 119386850 + MGP_NODShiLtJ_P0089915 Prmt7 protein_coding protein_coding MGP_NODShiLtJ_T0089916.1 MGP_NODShiLtJ_G0033883.1 mouse_genomes_project 8 119340892 119366999 + MGP_NODShiLtJ_P0089916 Prmt7 protein_coding protein_coding MGP_NODShiLtJ_T0089917.1 MGP_NODShiLtJ_G0033883.1 mouse_genomes_project 8 119340906 119375787 + Prmt7 protein_coding retained_intron MGP_NODShiLtJ_T0089918.1 MGP_NODShiLtJ_G0033883.1 mouse_genomes_project 8 119341087 119358879 + MGP_NODShiLtJ_P0089918 Prmt7 protein_coding protein_coding MGP_NODShiLtJ_T0089919.1 MGP_NODShiLtJ_G0033883.1 mouse_genomes_project 8 119342395 119370661 + MGP_NODShiLtJ_P0089919 Prmt7 protein_coding protein_coding MGP_NODShiLtJ_T0089920.1 MGP_NODShiLtJ_G0033883.1 mouse_genomes_project 8 119366134 119369996 + Prmt7 protein_coding processed_transcript MGP_NODShiLtJ_T0089921.1 MGP_NODShiLtJ_G0033883.1 mouse_genomes_project 8 119370362 119377325 + Prmt7 protein_coding processed_transcript MGP_NODShiLtJ_T0088723.1 MGP_NODShiLtJ_G0033494.1 mouse_genomes_project 8 78294369 78301699 + MGP_NODShiLtJ_P0088723 Hapln4 protein_coding protein_coding MGP_NODShiLtJ_T0015852.1 MGP_NODShiLtJ_G0013960.1 mouse_genomes_project 8 42654851 42657136 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088790.1 MGP_NODShiLtJ_G0033506.1 mouse_genomes_project 8 78545784 78562725 + MGP_NODShiLtJ_P0088790 Gdf1 protein_coding protein_coding MGP_NODShiLtJ_T0088791.1 MGP_NODShiLtJ_G0033506.1 mouse_genomes_project 8 78545784 78562730 + MGP_NODShiLtJ_P0088791 Gdf1 protein_coding protein_coding MGP_NODShiLtJ_T0088792.1 MGP_NODShiLtJ_G0033506.1 mouse_genomes_project 8 78548359 78553827 + Gdf1 protein_coding retained_intron MGP_NODShiLtJ_T0089024.1 MGP_NODShiLtJ_G0033582.1 mouse_genomes_project 8 80617721 80629640 + MGP_NODShiLtJ_P0089024 Hsh2d protein_coding protein_coding MGP_NODShiLtJ_T0089025.1 MGP_NODShiLtJ_G0033582.1 mouse_genomes_project 8 80622281 80629677 + MGP_NODShiLtJ_P0089025 Hsh2d protein_coding protein_coding MGP_NODShiLtJ_T0100822.1 MGP_NODShiLtJ_G0039216.1 mouse_genomes_project 8 74713243 74713372 - Gm25275 snoRNA snoRNA MGP_NODShiLtJ_T0090233.1 MGP_NODShiLtJ_G0033996.1 mouse_genomes_project 8 134309081 134326893 - MGP_NODShiLtJ_P0090233 Tldc1 protein_coding protein_coding MGP_NODShiLtJ_T0010859.1 MGP_NODShiLtJ_G0008992.1 mouse_genomes_project 8 71993546 71993656 - Mir710 miRNA miRNA MGP_NODShiLtJ_T0087689.1 MGP_NODShiLtJ_G0033142.1 mouse_genomes_project 8 1836469 1882909 - MGP_NODShiLtJ_P0087689 Shcbp1 protein_coding protein_coding MGP_NODShiLtJ_T0015900.1 MGP_NODShiLtJ_G0014008.1 mouse_genomes_project 8 141544509 141544674 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018296.1 MGP_NODShiLtJ_G0015580.1 mouse_genomes_project 8 51890521 51934012 + processed_transcript lincRNA MGP_NODShiLtJ_T0018297.1 MGP_NODShiLtJ_G0015580.1 mouse_genomes_project 8 51890578 51894343 + processed_transcript lincRNA MGP_NODShiLtJ_T0018298.1 MGP_NODShiLtJ_G0015580.1 mouse_genomes_project 8 51890653 51891966 + processed_transcript antisense MGP_NODShiLtJ_T0018299.1 MGP_NODShiLtJ_G0015580.1 mouse_genomes_project 8 51890897 51891371 + processed_transcript retained_intron MGP_NODShiLtJ_T0018300.1 MGP_NODShiLtJ_G0015580.1 mouse_genomes_project 8 51890959 51891465 + processed_transcript antisense MGP_NODShiLtJ_T0018301.1 MGP_NODShiLtJ_G0015580.1 mouse_genomes_project 8 51905952 51934897 + processed_transcript lincRNA MGP_NODShiLtJ_T0005269.1 MGP_NODShiLtJ_G0004464.1 mouse_genomes_project 8 10133622 10135045 - Gm15875 antisense antisense MGP_NODShiLtJ_T0009040.1 MGP_NODShiLtJ_G0007265.1 mouse_genomes_project 8 93621970 93634586 - Gm26721 lincRNA lincRNA MGP_NODShiLtJ_T0089933.1 MGP_NODShiLtJ_G0033891.1 mouse_genomes_project 8 120063826 120074188 - MGP_NODShiLtJ_P0089933 protein_coding protein_coding MGP_NODShiLtJ_T0089934.1 MGP_NODShiLtJ_G0033891.1 mouse_genomes_project 8 120063853 120074188 - MGP_NODShiLtJ_P0089934 protein_coding protein_coding MGP_NODShiLtJ_T0089935.1 MGP_NODShiLtJ_G0033891.1 mouse_genomes_project 8 120063857 120073810 - MGP_NODShiLtJ_P0089935 protein_coding protein_coding MGP_NODShiLtJ_T0089936.1 MGP_NODShiLtJ_G0033891.1 mouse_genomes_project 8 120065909 120074186 - MGP_NODShiLtJ_P0089936 protein_coding protein_coding MGP_NODShiLtJ_T0089937.1 MGP_NODShiLtJ_G0033891.1 mouse_genomes_project 8 120066008 120074110 - MGP_NODShiLtJ_P0089937 protein_coding protein_coding MGP_NODShiLtJ_T0089938.1 MGP_NODShiLtJ_G0033891.1 mouse_genomes_project 8 120066085 120074196 - MGP_NODShiLtJ_P0089938 protein_coding protein_coding MGP_NODShiLtJ_T0090007.1 MGP_NODShiLtJ_G0033914.1 mouse_genomes_project 8 123173465 123196524 - MGP_NODShiLtJ_P0090007 Ist1 protein_coding protein_coding MGP_NODShiLtJ_T0089074.1 MGP_NODShiLtJ_G0033602.1 mouse_genomes_project 8 83813056 83831972 + MGP_NODShiLtJ_P0089074 Mcm5 protein_coding protein_coding MGP_NODShiLtJ_T0005342.1 MGP_NODShiLtJ_G0004523.1 mouse_genomes_project 8 136495766 136498077 + antisense antisense MGP_NODShiLtJ_T0010886.1 MGP_NODShiLtJ_G0009019.1 mouse_genomes_project 8 95568660 95568777 + Mir8109 miRNA miRNA MGP_NODShiLtJ_T0087911.1 MGP_NODShiLtJ_G0033214.1 mouse_genomes_project 8 17888697 17894370 - MGP_NODShiLtJ_P0087911 Defb37 protein_coding protein_coding MGP_NODShiLtJ_T0088841.1 MGP_NODShiLtJ_G0033522.1 mouse_genomes_project 8 78909029 78923665 - MGP_NODShiLtJ_P0088841 Pgpep1 protein_coding protein_coding MGP_NODShiLtJ_T0010890.1 MGP_NODShiLtJ_G0009023.1 mouse_genomes_project 8 103302045 103302100 - Gm22151 miRNA miRNA MGP_NODShiLtJ_T0089811.1 MGP_NODShiLtJ_G0033841.1 mouse_genomes_project 8 118334998 118340019 + MGP_NODShiLtJ_P0089811 Elmo3 protein_coding protein_coding MGP_NODShiLtJ_T0005317.1 MGP_NODShiLtJ_G0004501.1 mouse_genomes_project 8 95171685 95177315 + antisense antisense MGP_NODShiLtJ_T0088216.1 MGP_NODShiLtJ_G0033337.1 mouse_genomes_project 8 34683932 34697675 + MGP_NODShiLtJ_P0088216 Mboat4 protein_coding protein_coding MGP_NODShiLtJ_T0015842.1 MGP_NODShiLtJ_G0013950.1 mouse_genomes_project 8 22333744 22333999 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090547.1 MGP_NODShiLtJ_G0034077.1 mouse_genomes_project 8 139501472 139545396 + MGP_NODShiLtJ_P0090547 Capn9 protein_coding protein_coding MGP_NODShiLtJ_T0090548.1 MGP_NODShiLtJ_G0034077.1 mouse_genomes_project 8 139501474 139515138 + MGP_NODShiLtJ_P0090548 Capn9 protein_coding protein_coding MGP_NODShiLtJ_T0090549.1 MGP_NODShiLtJ_G0034077.1 mouse_genomes_project 8 139538649 139541370 + Capn9 protein_coding processed_transcript MGP_NODShiLtJ_T0098496.1 MGP_NODShiLtJ_G0036891.1 mouse_genomes_project 8 10730491 10788798 + Gm5607 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0098497.1 MGP_NODShiLtJ_G0036891.1 mouse_genomes_project 8 10730491 10788777 + Gm5607 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0005351.1 MGP_NODShiLtJ_G0004531.1 mouse_genomes_project 8 140927250 140940530 + A730098A19Rik antisense antisense MGP_NODShiLtJ_T0098098.1 MGP_NODShiLtJ_G0036510.1 mouse_genomes_project 8 80534120 80534207 + Gm24747 rRNA rRNA MGP_NODShiLtJ_T0088165.1 MGP_NODShiLtJ_G0033322.1 mouse_genomes_project 8 31470173 31544443 + MGP_NODShiLtJ_P0088165 Fut10 protein_coding protein_coding MGP_NODShiLtJ_T0088166.1 MGP_NODShiLtJ_G0033322.1 mouse_genomes_project 8 31470179 31519484 + MGP_NODShiLtJ_P0088166 Fut10 protein_coding protein_coding MGP_NODShiLtJ_T0088167.1 MGP_NODShiLtJ_G0033322.1 mouse_genomes_project 8 31485469 31517717 + Fut10 protein_coding processed_transcript MGP_NODShiLtJ_T0089487.1 MGP_NODShiLtJ_G0033724.1 mouse_genomes_project 8 98384321 98386213 - Brd7 protein_coding processed_transcript MGP_NODShiLtJ_T0089488.1 MGP_NODShiLtJ_G0033724.1 mouse_genomes_project 8 98384329 98416477 - MGP_NODShiLtJ_P0089488 Brd7 protein_coding protein_coding MGP_NODShiLtJ_T0089489.1 MGP_NODShiLtJ_G0033724.1 mouse_genomes_project 8 98386080 98387214 - Brd7 protein_coding processed_transcript MGP_NODShiLtJ_T0089490.1 MGP_NODShiLtJ_G0033724.1 mouse_genomes_project 8 98386099 98388778 - Brd7 protein_coding retained_intron MGP_NODShiLtJ_T0089491.1 MGP_NODShiLtJ_G0033724.1 mouse_genomes_project 8 98386179 98396115 - Brd7 protein_coding processed_transcript MGP_NODShiLtJ_T0089492.1 MGP_NODShiLtJ_G0033724.1 mouse_genomes_project 8 98386841 98396037 - Brd7 protein_coding processed_transcript MGP_NODShiLtJ_T0089493.1 MGP_NODShiLtJ_G0033724.1 mouse_genomes_project 8 98411827 98416300 - Brd7 protein_coding processed_transcript MGP_NODShiLtJ_T0100804.1 MGP_NODShiLtJ_G0039198.1 mouse_genomes_project 8 31434134 31434238 - Snord13 snoRNA snoRNA MGP_NODShiLtJ_T0089043.1 MGP_NODShiLtJ_G0033592.1 mouse_genomes_project 8 80955946 81011206 - MGP_NODShiLtJ_P0089043 Med26 protein_coding protein_coding MGP_NODShiLtJ_T0089542.1 MGP_NODShiLtJ_G0033742.1 mouse_genomes_project 8 103289008 103290009 + MGP_NODShiLtJ_P0089542 Capns2 protein_coding protein_coding MGP_NODShiLtJ_T0009012.1 MGP_NODShiLtJ_G0007240.1 mouse_genomes_project 8 34805477 34814827 + Gm29243 lincRNA lincRNA MGP_NODShiLtJ_T0099546.1 MGP_NODShiLtJ_G0037940.1 mouse_genomes_project 8 56193268 56193407 + Gm24929 snRNA snRNA MGP_NODShiLtJ_T0010917.1 MGP_NODShiLtJ_G0009050.1 mouse_genomes_project 8 136665828 136665891 + Mir7237 miRNA miRNA MGP_NODShiLtJ_T0090417.1 MGP_NODShiLtJ_G0034040.1 mouse_genomes_project 8 137354218 137430053 - MGP_NODShiLtJ_P0090417 Cbfa2t3 protein_coding protein_coding MGP_NODShiLtJ_T0090418.1 MGP_NODShiLtJ_G0034040.1 mouse_genomes_project 8 137354942 137405269 - MGP_NODShiLtJ_P0090418 Cbfa2t3 protein_coding protein_coding MGP_NODShiLtJ_T0090419.1 MGP_NODShiLtJ_G0034040.1 mouse_genomes_project 8 137355417 137405372 - MGP_NODShiLtJ_P0090419 Cbfa2t3 protein_coding protein_coding MGP_NODShiLtJ_T0090420.1 MGP_NODShiLtJ_G0034040.1 mouse_genomes_project 8 137363866 137405891 - MGP_NODShiLtJ_P0090420 Cbfa2t3 protein_coding protein_coding MGP_NODShiLtJ_T0090421.1 MGP_NODShiLtJ_G0034040.1 mouse_genomes_project 8 137363870 137372379 - Cbfa2t3 protein_coding processed_transcript MGP_NODShiLtJ_T0090422.1 MGP_NODShiLtJ_G0034040.1 mouse_genomes_project 8 137367856 137405308 - Cbfa2t3 protein_coding processed_transcript MGP_NODShiLtJ_T0090423.1 MGP_NODShiLtJ_G0034040.1 mouse_genomes_project 8 137375940 137429846 - Cbfa2t3 protein_coding retained_intron MGP_NODShiLtJ_T0089807.1 MGP_NODShiLtJ_G0033838.1 mouse_genomes_project 8 118305123 118316729 - MGP_NODShiLtJ_P0089807 4931428F04Rik protein_coding protein_coding MGP_NODShiLtJ_T0089808.1 MGP_NODShiLtJ_G0033838.1 mouse_genomes_project 8 118305123 118316729 - MGP_NODShiLtJ_P0089808 4931428F04Rik protein_coding protein_coding MGP_NODShiLtJ_T0008996.1 MGP_NODShiLtJ_G0007228.1 mouse_genomes_project 8 21629363 21632824 + Gm17491 lincRNA lincRNA MGP_NODShiLtJ_T0087609.1 MGP_NODShiLtJ_G0033119.1 mouse_genomes_project 8 640352 645907 + MGP_NODShiLtJ_P0087609 Retn protein_coding protein_coding MGP_NODShiLtJ_T0087610.1 MGP_NODShiLtJ_G0033119.1 mouse_genomes_project 8 640352 642679 + MGP_NODShiLtJ_P0087610 Retn protein_coding protein_coding MGP_NODShiLtJ_T0088578.1 MGP_NODShiLtJ_G0033446.1 mouse_genomes_project 8 71357782 71637317 - MGP_NODShiLtJ_P0088578 Tll1 protein_coding protein_coding MGP_NODShiLtJ_T0089433.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95726470 95768413 + Phkb protein_coding processed_transcript MGP_NODShiLtJ_T0089434.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95726502 95832798 + MGP_NODShiLtJ_P0089434 Phkb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089435.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95726513 95969191 + MGP_NODShiLtJ_P0089435 Phkb protein_coding protein_coding MGP_NODShiLtJ_T0089436.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95726519 95818921 + Phkb protein_coding processed_transcript MGP_NODShiLtJ_T0089437.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95726527 95818655 + MGP_NODShiLtJ_P0089437 Phkb protein_coding protein_coding MGP_NODShiLtJ_T0089438.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95728298 95793134 + MGP_NODShiLtJ_P0089438 Phkb protein_coding protein_coding MGP_NODShiLtJ_T0089439.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95728562 95768500 + MGP_NODShiLtJ_P0089439 Phkb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089440.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95918381 95931288 + MGP_NODShiLtJ_P0089440 Phkb protein_coding protein_coding MGP_NODShiLtJ_T0089441.1 MGP_NODShiLtJ_G0033712.1 mouse_genomes_project 8 95936542 95968456 + Phkb protein_coding processed_transcript MGP_NODShiLtJ_T0088171.1 MGP_NODShiLtJ_G0033326.1 mouse_genomes_project 8 33731755 33905180 - MGP_NODShiLtJ_P0088171 Wrn protein_coding protein_coding MGP_NODShiLtJ_T0088172.1 MGP_NODShiLtJ_G0033326.1 mouse_genomes_project 8 33731755 33905180 - MGP_NODShiLtJ_P0088172 Wrn protein_coding protein_coding MGP_NODShiLtJ_T0089738.1 MGP_NODShiLtJ_G0033814.1 mouse_genomes_project 8 117336746 117399104 - MGP_NODShiLtJ_P0089738 Terb1 protein_coding protein_coding MGP_NODShiLtJ_T0089739.1 MGP_NODShiLtJ_G0033814.1 mouse_genomes_project 8 117337064 117399100 - MGP_NODShiLtJ_P0089739 Terb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089740.1 MGP_NODShiLtJ_G0033814.1 mouse_genomes_project 8 117337065 117399099 - MGP_NODShiLtJ_P0089740 Terb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089741.1 MGP_NODShiLtJ_G0033814.1 mouse_genomes_project 8 117338648 117399127 - MGP_NODShiLtJ_P0089741 Terb1 protein_coding protein_coding MGP_NODShiLtJ_T0088882.1 MGP_NODShiLtJ_G0033547.1 mouse_genomes_project 8 79552965 79587030 - MGP_NODShiLtJ_P0088882 Haus8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088883.1 MGP_NODShiLtJ_G0033547.1 mouse_genomes_project 8 79555357 79587503 - MGP_NODShiLtJ_P0088883 Haus8 protein_coding protein_coding MGP_NODShiLtJ_T0088884.1 MGP_NODShiLtJ_G0033547.1 mouse_genomes_project 8 79555357 79586946 - MGP_NODShiLtJ_P0088884 Haus8 protein_coding protein_coding MGP_NODShiLtJ_T0088885.1 MGP_NODShiLtJ_G0033547.1 mouse_genomes_project 8 79559663 79587030 - Haus8 protein_coding processed_transcript MGP_NODShiLtJ_T0088886.1 MGP_NODShiLtJ_G0033547.1 mouse_genomes_project 8 79560258 79560874 - Haus8 protein_coding retained_intron MGP_NODShiLtJ_T0088887.1 MGP_NODShiLtJ_G0033547.1 mouse_genomes_project 8 79560285 79587048 - Haus8 protein_coding processed_transcript MGP_NODShiLtJ_T0088888.1 MGP_NODShiLtJ_G0033547.1 mouse_genomes_project 8 79561258 79587012 - Haus8 protein_coding retained_intron MGP_NODShiLtJ_T0088889.1 MGP_NODShiLtJ_G0033547.1 mouse_genomes_project 8 79571185 79586928 - Haus8 protein_coding processed_transcript MGP_NODShiLtJ_T0088490.1 MGP_NODShiLtJ_G0033422.1 mouse_genomes_project 8 61253949 61433596 + Glra3 protein_coding processed_transcript MGP_NODShiLtJ_T0088491.1 MGP_NODShiLtJ_G0033422.1 mouse_genomes_project 8 61253998 61542991 + MGP_NODShiLtJ_P0088491 Glra3 protein_coding protein_coding MGP_NODShiLtJ_T0090529.1 MGP_NODShiLtJ_G0034072.1 mouse_genomes_project 8 138907991 138935535 + MGP_NODShiLtJ_P0090529 Urb2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090530.1 MGP_NODShiLtJ_G0034072.1 mouse_genomes_project 8 138908009 138935536 + MGP_NODShiLtJ_P0090530 Urb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089642.1 MGP_NODShiLtJ_G0033775.1 mouse_genomes_project 8 105370444 105387969 + MGP_NODShiLtJ_P0089642 Coq9 protein_coding protein_coding MGP_NODShiLtJ_T0089643.1 MGP_NODShiLtJ_G0033775.1 mouse_genomes_project 8 105370528 105383856 + Coq9 protein_coding retained_intron MGP_NODShiLtJ_T0089644.1 MGP_NODShiLtJ_G0033775.1 mouse_genomes_project 8 105370538 105374889 + Coq9 protein_coding retained_intron MGP_NODShiLtJ_T0089645.1 MGP_NODShiLtJ_G0033775.1 mouse_genomes_project 8 105370552 105386269 + Coq9 protein_coding retained_intron MGP_NODShiLtJ_T0089646.1 MGP_NODShiLtJ_G0033775.1 mouse_genomes_project 8 105370552 105386344 + MGP_NODShiLtJ_P0089646 Coq9 protein_coding protein_coding MGP_NODShiLtJ_T0089647.1 MGP_NODShiLtJ_G0033775.1 mouse_genomes_project 8 105383262 105384056 + Coq9 protein_coding retained_intron MGP_NODShiLtJ_T0089648.1 MGP_NODShiLtJ_G0033775.1 mouse_genomes_project 8 105386588 105387411 + Coq9 protein_coding retained_intron MGP_NODShiLtJ_T0088608.1 MGP_NODShiLtJ_G0033456.1 mouse_genomes_project 8 74233711 74246206 - Tma16 protein_coding retained_intron MGP_NODShiLtJ_T0088609.1 MGP_NODShiLtJ_G0033456.1 mouse_genomes_project 8 74236089 74246228 - MGP_NODShiLtJ_P0088609 Tma16 protein_coding protein_coding MGP_NODShiLtJ_T0088610.1 MGP_NODShiLtJ_G0033456.1 mouse_genomes_project 8 74242095 74246239 - Tma16 protein_coding retained_intron MGP_NODShiLtJ_T0088879.1 MGP_NODShiLtJ_G0033544.1 mouse_genomes_project 8 79443903 79478959 + MGP_NODShiLtJ_P0088879 protein_coding protein_coding MGP_NODShiLtJ_T0090248.1 MGP_NODShiLtJ_G0034000.1 mouse_genomes_project 8 134560580 134623077 + MGP_NODShiLtJ_P0090248 Crispld2 protein_coding protein_coding MGP_NODShiLtJ_T0090249.1 MGP_NODShiLtJ_G0034000.1 mouse_genomes_project 8 134560650 134621825 + MGP_NODShiLtJ_P0090249 Crispld2 protein_coding protein_coding MGP_NODShiLtJ_T0090250.1 MGP_NODShiLtJ_G0034000.1 mouse_genomes_project 8 134571779 134621825 + MGP_NODShiLtJ_P0090250 Crispld2 protein_coding protein_coding MGP_NODShiLtJ_T0090251.1 MGP_NODShiLtJ_G0034000.1 mouse_genomes_project 8 134583082 134585599 + Crispld2 protein_coding processed_transcript MGP_NODShiLtJ_T0090252.1 MGP_NODShiLtJ_G0034000.1 mouse_genomes_project 8 134600807 134620720 + Crispld2 protein_coding retained_intron MGP_NODShiLtJ_T0009017.1 MGP_NODShiLtJ_G0007245.1 mouse_genomes_project 8 48295508 48305513 - lincRNA lincRNA MGP_NODShiLtJ_T0009024.1 MGP_NODShiLtJ_G0007252.1 mouse_genomes_project 8 67926585 67933923 - 1700001D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0098456.1 MGP_NODShiLtJ_G0036856.1 mouse_genomes_project 8 75763504 75763894 - sense_intronic sense_intronic MGP_NODShiLtJ_T0009043.1 MGP_NODShiLtJ_G0007268.1 mouse_genomes_project 8 94448962 94456601 + lincRNA lincRNA MGP_NODShiLtJ_T0090551.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139604699 139619464 - MGP_NODShiLtJ_P0090551 Ttc13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090552.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139604709 139660457 - MGP_NODShiLtJ_P0090552 Ttc13 protein_coding protein_coding MGP_NODShiLtJ_T0090553.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139604709 139660438 - MGP_NODShiLtJ_P0090553 Ttc13 protein_coding protein_coding MGP_NODShiLtJ_T0090554.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139604709 139660446 - MGP_NODShiLtJ_P0090554 Ttc13 protein_coding protein_coding MGP_NODShiLtJ_T0090555.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139606850 139607628 - Ttc13 protein_coding retained_intron MGP_NODShiLtJ_T0090556.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139607356 139608864 - Ttc13 protein_coding retained_intron MGP_NODShiLtJ_T0090557.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139607507 139616282 - Ttc13 protein_coding retained_intron MGP_NODShiLtJ_T0090558.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139616368 139619877 - Ttc13 protein_coding retained_intron MGP_NODShiLtJ_T0090559.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139616874 139619467 - Ttc13 protein_coding retained_intron MGP_NODShiLtJ_T0090560.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139620500 139660436 - MGP_NODShiLtJ_P0090560 Ttc13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090561.1 MGP_NODShiLtJ_G0034079.1 mouse_genomes_project 8 139644877 139660455 - Ttc13 protein_coding retained_intron MGP_NODShiLtJ_T0088959.1 MGP_NODShiLtJ_G0033567.1 mouse_genomes_project 8 79941191 79952768 + MGP_NODShiLtJ_P0088959 Fam129c protein_coding protein_coding MGP_NODShiLtJ_T0088960.1 MGP_NODShiLtJ_G0033567.1 mouse_genomes_project 8 79941325 79952756 + Fam129c protein_coding retained_intron MGP_NODShiLtJ_T0088961.1 MGP_NODShiLtJ_G0033567.1 mouse_genomes_project 8 79942719 79944632 + Fam129c protein_coding processed_transcript MGP_NODShiLtJ_T0088962.1 MGP_NODShiLtJ_G0033567.1 mouse_genomes_project 8 79943453 79947066 + Fam129c protein_coding retained_intron MGP_NODShiLtJ_T0088963.1 MGP_NODShiLtJ_G0033567.1 mouse_genomes_project 8 79947098 79947775 + Fam129c protein_coding retained_intron MGP_NODShiLtJ_T0088964.1 MGP_NODShiLtJ_G0033567.1 mouse_genomes_project 8 79947182 79952756 + Fam129c protein_coding retained_intron MGP_NODShiLtJ_T0088965.1 MGP_NODShiLtJ_G0033567.1 mouse_genomes_project 8 79949575 79952403 + MGP_NODShiLtJ_P0088965 Fam129c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088966.1 MGP_NODShiLtJ_G0033567.1 mouse_genomes_project 8 79949792 79952765 + MGP_NODShiLtJ_P0088966 Fam129c protein_coding protein_coding MGP_NODShiLtJ_T0100794.1 MGP_NODShiLtJ_G0039188.1 mouse_genomes_project 8 15554045 15554165 + Gm25278 snoRNA snoRNA MGP_NODShiLtJ_T0087581.1 MGP_NODShiLtJ_G0033115.1 mouse_genomes_project 8 589493 603123 - Xab2 protein_coding retained_intron MGP_NODShiLtJ_T0087582.1 MGP_NODShiLtJ_G0033115.1 mouse_genomes_project 8 591159 603134 - MGP_NODShiLtJ_P0087582 Xab2 protein_coding protein_coding MGP_NODShiLtJ_T0087583.1 MGP_NODShiLtJ_G0033115.1 mouse_genomes_project 8 591162 603120 - Xab2 protein_coding retained_intron MGP_NODShiLtJ_T0087584.1 MGP_NODShiLtJ_G0033115.1 mouse_genomes_project 8 595389 603088 - MGP_NODShiLtJ_P0087584 Xab2 protein_coding protein_coding MGP_NODShiLtJ_T0087585.1 MGP_NODShiLtJ_G0033115.1 mouse_genomes_project 8 597067 603100 - MGP_NODShiLtJ_P0087585 Xab2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011614.1 MGP_NODShiLtJ_G0009747.1 mouse_genomes_project 8 105222609 105222879 - Gm22846 misc_RNA misc_RNA MGP_NODShiLtJ_T0011602.1 MGP_NODShiLtJ_G0009735.1 mouse_genomes_project 8 10700510 10700827 + Gm22207 misc_RNA misc_RNA MGP_NODShiLtJ_T0015822.1 MGP_NODShiLtJ_G0013930.1 mouse_genomes_project 8 1973802 1974285 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087903.1 MGP_NODShiLtJ_G0033211.1 mouse_genomes_project 8 17738875 17785163 + MGP_NODShiLtJ_P0087903 Agpat5 protein_coding protein_coding MGP_NODShiLtJ_T0087904.1 MGP_NODShiLtJ_G0033211.1 mouse_genomes_project 8 17738877 17777214 + MGP_NODShiLtJ_P0087904 Agpat5 protein_coding protein_coding MGP_NODShiLtJ_T0088398.1 MGP_NODShiLtJ_G0033392.1 mouse_genomes_project 8 48976530 48981018 - MGP_NODShiLtJ_P0088398 Slc25a4 protein_coding protein_coding MGP_NODShiLtJ_T0088399.1 MGP_NODShiLtJ_G0033392.1 mouse_genomes_project 8 48977703 48980764 - Slc25a4 protein_coding retained_intron MGP_NODShiLtJ_T0090485.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138074239 138126093 - MGP_NODShiLtJ_P0090485 Fanca protein_coding protein_coding MGP_NODShiLtJ_T0090486.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138075229 138080163 - Fanca protein_coding processed_transcript MGP_NODShiLtJ_T0090487.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138077144 138083664 - MGP_NODShiLtJ_P0090487 Fanca protein_coding protein_coding MGP_NODShiLtJ_T0090488.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138080097 138082538 - MGP_NODShiLtJ_P0090488 Fanca protein_coding protein_coding MGP_NODShiLtJ_T0090489.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138083401 138089449 - Fanca protein_coding retained_intron MGP_NODShiLtJ_T0090490.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138092934 138126077 - Fanca protein_coding retained_intron MGP_NODShiLtJ_T0090491.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138093149 138120249 - MGP_NODShiLtJ_P0090491 Fanca protein_coding protein_coding MGP_NODShiLtJ_T0090492.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138096106 138098713 - Fanca protein_coding retained_intron MGP_NODShiLtJ_T0090493.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138108903 138126077 - MGP_NODShiLtJ_P0090493 Fanca protein_coding protein_coding MGP_NODShiLtJ_T0090494.1 MGP_NODShiLtJ_G0034055.1 mouse_genomes_project 8 138119169 138126077 - Fanca protein_coding retained_intron MGP_NODShiLtJ_T0088940.1 MGP_NODShiLtJ_G0033559.1 mouse_genomes_project 8 79824330 79829628 + MGP_NODShiLtJ_P0088940 Gtpbp3 protein_coding protein_coding MGP_NODShiLtJ_T0088941.1 MGP_NODShiLtJ_G0033559.1 mouse_genomes_project 8 79824948 79829628 + MGP_NODShiLtJ_P0088941 Gtpbp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088942.1 MGP_NODShiLtJ_G0033559.1 mouse_genomes_project 8 79824955 79835773 + MGP_NODShiLtJ_P0088942 Gtpbp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088943.1 MGP_NODShiLtJ_G0033559.1 mouse_genomes_project 8 79824961 79825806 + Gtpbp3 protein_coding retained_intron MGP_NODShiLtJ_T0088944.1 MGP_NODShiLtJ_G0033559.1 mouse_genomes_project 8 79824970 79829628 + Gtpbp3 protein_coding retained_intron MGP_NODShiLtJ_T0088945.1 MGP_NODShiLtJ_G0033559.1 mouse_genomes_project 8 79824978 79829628 + MGP_NODShiLtJ_P0088945 Gtpbp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088946.1 MGP_NODShiLtJ_G0033559.1 mouse_genomes_project 8 79825686 79827639 + Gtpbp3 protein_coding retained_intron MGP_NODShiLtJ_T0009020.1 MGP_NODShiLtJ_G0007248.1 mouse_genomes_project 8 62176385 62177722 + lincRNA lincRNA MGP_NODShiLtJ_T0090141.1 MGP_NODShiLtJ_G0033959.1 mouse_genomes_project 8 127577118 127586710 + MGP_NODShiLtJ_P0090141 Mon1b protein_coding protein_coding MGP_NODShiLtJ_T0090142.1 MGP_NODShiLtJ_G0033959.1 mouse_genomes_project 8 127577331 127586710 + MGP_NODShiLtJ_P0090142 Mon1b protein_coding protein_coding MGP_NODShiLtJ_T0088303.1 MGP_NODShiLtJ_G0033366.1 mouse_genomes_project 8 43015344 43038455 - MGP_NODShiLtJ_P0088303 Fgl1 protein_coding protein_coding MGP_NODShiLtJ_T0088304.1 MGP_NODShiLtJ_G0033366.1 mouse_genomes_project 8 43021524 43038452 - Fgl1 protein_coding retained_intron MGP_NODShiLtJ_T0087832.1 MGP_NODShiLtJ_G0033188.1 mouse_genomes_project 8 12138261 12193897 + MGP_NODShiLtJ_P0087832 protein_coding protein_coding MGP_NODShiLtJ_T0088428.1 MGP_NODShiLtJ_G0033400.1 mouse_genomes_project 8 50045002 50225256 - MGP_NODShiLtJ_P0088428 Stox2 protein_coding protein_coding MGP_NODShiLtJ_T0088429.1 MGP_NODShiLtJ_G0033400.1 mouse_genomes_project 8 50045002 50158645 - MGP_NODShiLtJ_P0088429 Stox2 protein_coding protein_coding MGP_NODShiLtJ_T0088976.1 MGP_NODShiLtJ_G0033570.1 mouse_genomes_project 8 80023544 80037819 + MGP_NODShiLtJ_P0088976 Jak3 protein_coding protein_coding MGP_NODShiLtJ_T0088977.1 MGP_NODShiLtJ_G0033570.1 mouse_genomes_project 8 80023544 80035800 + MGP_NODShiLtJ_P0088977 Jak3 protein_coding protein_coding MGP_NODShiLtJ_T0088978.1 MGP_NODShiLtJ_G0033570.1 mouse_genomes_project 8 80023800 80027555 + Jak3 protein_coding retained_intron MGP_NODShiLtJ_T0088979.1 MGP_NODShiLtJ_G0033570.1 mouse_genomes_project 8 80024799 80035802 + MGP_NODShiLtJ_P0088979 Jak3 protein_coding protein_coding MGP_NODShiLtJ_T0088980.1 MGP_NODShiLtJ_G0033570.1 mouse_genomes_project 8 80025583 80037468 + Jak3 protein_coding retained_intron MGP_NODShiLtJ_T0088364.1 MGP_NODShiLtJ_G0033384.1 mouse_genomes_project 8 48624997 48663883 + MGP_NODShiLtJ_P0088364 Pdlim3 protein_coding protein_coding MGP_NODShiLtJ_T0087865.1 MGP_NODShiLtJ_G0033203.1 mouse_genomes_project 8 13425434 13447047 + MGP_NODShiLtJ_P0087865 Cln8 protein_coding protein_coding MGP_NODShiLtJ_T0087866.1 MGP_NODShiLtJ_G0033203.1 mouse_genomes_project 8 13438773 13447390 + MGP_NODShiLtJ_P0087866 Cln8 protein_coding protein_coding MGP_NODShiLtJ_T0087867.1 MGP_NODShiLtJ_G0033203.1 mouse_genomes_project 8 13438839 13454047 + MGP_NODShiLtJ_P0087867 Cln8 protein_coding protein_coding MGP_NODShiLtJ_T0087868.1 MGP_NODShiLtJ_G0033203.1 mouse_genomes_project 8 13439732 13447117 + MGP_NODShiLtJ_P0087868 Cln8 protein_coding protein_coding MGP_NODShiLtJ_T0087869.1 MGP_NODShiLtJ_G0033203.1 mouse_genomes_project 8 13440087 13447250 + MGP_NODShiLtJ_P0087869 Cln8 protein_coding protein_coding MGP_NODShiLtJ_T0090253.1 MGP_NODShiLtJ_G0034001.1 mouse_genomes_project 8 134656784 134676426 - MGP_NODShiLtJ_P0090253 Zdhhc7 protein_coding protein_coding MGP_NODShiLtJ_T0090254.1 MGP_NODShiLtJ_G0034001.1 mouse_genomes_project 8 134658092 134662561 - Zdhhc7 protein_coding retained_intron MGP_NODShiLtJ_T0090255.1 MGP_NODShiLtJ_G0034001.1 mouse_genomes_project 8 134660947 134663801 - Zdhhc7 protein_coding retained_intron MGP_NODShiLtJ_T0090256.1 MGP_NODShiLtJ_G0034001.1 mouse_genomes_project 8 134661137 134663994 - Zdhhc7 protein_coding retained_intron MGP_NODShiLtJ_T0090257.1 MGP_NODShiLtJ_G0034001.1 mouse_genomes_project 8 134667918 134676016 - Zdhhc7 protein_coding processed_transcript MGP_NODShiLtJ_T0009025.1 MGP_NODShiLtJ_G0007253.1 mouse_genomes_project 8 72588877 72635379 - lincRNA lincRNA MGP_NODShiLtJ_T0015838.1 MGP_NODShiLtJ_G0013946.1 mouse_genomes_project 8 20272732 20276481 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101199.1 MGP_NODShiLtJ_G0039506.1 mouse_genomes_project 8 80312527 80314823 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101200.1 MGP_NODShiLtJ_G0039506.1 mouse_genomes_project 8 80313173 80313796 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0089945.1 MGP_NODShiLtJ_G0033896.1 mouse_genomes_project 8 120244455 120246941 - MGP_NODShiLtJ_P0089945 Pdf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089948.1 MGP_NODShiLtJ_G0033896.1 mouse_genomes_project 8 120246274 120248332 - MGP_NODShiLtJ_P0089948 Pdf protein_coding protein_coding MGP_NODShiLtJ_T0099568.1 MGP_NODShiLtJ_G0037962.1 mouse_genomes_project 8 120208090 120208200 - Gm22085 snRNA snRNA MGP_NODShiLtJ_T0005293.1 MGP_NODShiLtJ_G0004480.1 mouse_genomes_project 8 42857038 42860184 + Gm16192 antisense antisense MGP_NODShiLtJ_T0088919.1 MGP_NODShiLtJ_G0033552.1 mouse_genomes_project 8 79715474 79727001 - MGP_NODShiLtJ_P0088919 Ushbp1 protein_coding protein_coding MGP_NODShiLtJ_T0015885.1 MGP_NODShiLtJ_G0013993.1 mouse_genomes_project 8 104916087 104916683 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087932.1 MGP_NODShiLtJ_G0033233.1 mouse_genomes_project 8 20782206 20783337 - MGP_NODShiLtJ_P0087932 protein_coding protein_coding MGP_NODShiLtJ_T0100803.1 MGP_NODShiLtJ_G0039197.1 mouse_genomes_project 8 25080127 25080257 + Gm24992 snoRNA snoRNA MGP_NODShiLtJ_T0088169.1 MGP_NODShiLtJ_G0033324.1 mouse_genomes_project 8 32183224 32287350 - MGP_NODShiLtJ_P0088169 Nrg1 protein_coding protein_coding MGP_NODShiLtJ_T0002291.1 MGP_NODShiLtJ_G0002201.1 mouse_genomes_project 8 122287277 122288981 + TEC TEC MGP_NODShiLtJ_T0087800.1 MGP_NODShiLtJ_G0033176.1 mouse_genomes_project 8 11548440 11565799 + MGP_NODShiLtJ_P0087800 Lamp1 protein_coding protein_coding MGP_NODShiLtJ_T0087905.1 MGP_NODShiLtJ_G0033212.1 mouse_genomes_project 8 17830103 17849632 - Xkr5 protein_coding processed_transcript MGP_NODShiLtJ_T0087906.1 MGP_NODShiLtJ_G0033212.1 mouse_genomes_project 8 17830103 17849736 - MGP_NODShiLtJ_P0087906 Xkr5 protein_coding protein_coding MGP_NODShiLtJ_T0087907.1 MGP_NODShiLtJ_G0033212.1 mouse_genomes_project 8 17830103 17849734 - MGP_NODShiLtJ_P0087907 Xkr5 protein_coding protein_coding MGP_NODShiLtJ_T0087908.1 MGP_NODShiLtJ_G0033212.1 mouse_genomes_project 8 17830106 17849677 - MGP_NODShiLtJ_P0087908 Xkr5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087909.1 MGP_NODShiLtJ_G0033212.1 mouse_genomes_project 8 17830462 17849698 - MGP_NODShiLtJ_P0087909 Xkr5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088257.1 MGP_NODShiLtJ_G0033358.1 mouse_genomes_project 8 42196494 42255306 + MGP_NODShiLtJ_P0088257 Zdhhc2 protein_coding protein_coding MGP_NODShiLtJ_T0088258.1 MGP_NODShiLtJ_G0033358.1 mouse_genomes_project 8 42196500 42284424 + MGP_NODShiLtJ_P0088258 Zdhhc2 protein_coding protein_coding MGP_NODShiLtJ_T0088259.1 MGP_NODShiLtJ_G0033358.1 mouse_genomes_project 8 42196501 42240050 + Zdhhc2 protein_coding retained_intron MGP_NODShiLtJ_T0088260.1 MGP_NODShiLtJ_G0033358.1 mouse_genomes_project 8 42196519 42253845 + MGP_NODShiLtJ_P0088260 Zdhhc2 protein_coding protein_coding MGP_NODShiLtJ_T0088261.1 MGP_NODShiLtJ_G0033358.1 mouse_genomes_project 8 42196783 42227175 + Zdhhc2 protein_coding processed_transcript MGP_NODShiLtJ_T0088269.1 MGP_NODShiLtJ_G0033358.1 mouse_genomes_project 8 42274713 42284426 + Zdhhc2 protein_coding processed_transcript MGP_NODShiLtJ_T0089497.1 MGP_NODShiLtJ_G0033727.1 mouse_genomes_project 8 98722837 98764794 + MGP_NODShiLtJ_P0089497 Nod2 protein_coding protein_coding MGP_NODShiLtJ_T0089498.1 MGP_NODShiLtJ_G0033727.1 mouse_genomes_project 8 98722837 98764794 + MGP_NODShiLtJ_P0089498 Nod2 protein_coding protein_coding MGP_NODShiLtJ_T0089499.1 MGP_NODShiLtJ_G0033727.1 mouse_genomes_project 8 98722906 98741457 + Nod2 protein_coding retained_intron MGP_NODShiLtJ_T0089500.1 MGP_NODShiLtJ_G0033727.1 mouse_genomes_project 8 98726908 98764793 + MGP_NODShiLtJ_P0089500 Nod2 protein_coding protein_coding MGP_NODShiLtJ_T0089152.1 MGP_NODShiLtJ_G0033628.1 mouse_genomes_project 8 91916328 91999766 - MGP_NODShiLtJ_P0089152 Il15 protein_coding protein_coding MGP_NODShiLtJ_T0010906.1 MGP_NODShiLtJ_G0009039.1 mouse_genomes_project 8 124630213 124630294 - Mir3473d miRNA miRNA MGP_NODShiLtJ_T0090180.1 MGP_NODShiLtJ_G0033974.1 mouse_genomes_project 8 131274908 131381875 - MGP_NODShiLtJ_P0090180 Pkd1l2 protein_coding protein_coding MGP_NODShiLtJ_T0090181.1 MGP_NODShiLtJ_G0033974.1 mouse_genomes_project 8 131274908 131381875 - MGP_NODShiLtJ_P0090181 Pkd1l2 protein_coding protein_coding MGP_NODShiLtJ_T0090182.1 MGP_NODShiLtJ_G0033974.1 mouse_genomes_project 8 131289823 131318292 - Pkd1l2 protein_coding retained_intron MGP_NODShiLtJ_T0090183.1 MGP_NODShiLtJ_G0033974.1 mouse_genomes_project 8 131317746 131323165 - Pkd1l2 protein_coding retained_intron MGP_NODShiLtJ_T0087787.1 MGP_NODShiLtJ_G0033174.1 mouse_genomes_project 8 11463700 11493208 - MGP_NODShiLtJ_P0087787 Pcid2 protein_coding protein_coding MGP_NODShiLtJ_T0087788.1 MGP_NODShiLtJ_G0033174.1 mouse_genomes_project 8 11463700 11493208 - MGP_NODShiLtJ_P0087788 Pcid2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087789.1 MGP_NODShiLtJ_G0033174.1 mouse_genomes_project 8 11466235 11473425 - Pcid2 protein_coding processed_transcript MGP_NODShiLtJ_T0087790.1 MGP_NODShiLtJ_G0033174.1 mouse_genomes_project 8 11466407 11492580 - Pcid2 protein_coding processed_transcript MGP_NODShiLtJ_T0087791.1 MGP_NODShiLtJ_G0033174.1 mouse_genomes_project 8 11472066 11486385 - MGP_NODShiLtJ_P0087791 Pcid2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087792.1 MGP_NODShiLtJ_G0033174.1 mouse_genomes_project 8 11472115 11492570 - MGP_NODShiLtJ_P0087792 Pcid2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090204.1 MGP_NODShiLtJ_G0033984.1 mouse_genomes_project 8 133889379 133908350 + MGP_NODShiLtJ_P0090204 Mlycd protein_coding protein_coding MGP_NODShiLtJ_T0090205.1 MGP_NODShiLtJ_G0033984.1 mouse_genomes_project 8 133889399 133908335 + Mlycd protein_coding retained_intron MGP_NODShiLtJ_T0088697.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78023275 78064035 + MGP_NODShiLtJ_P0088697 Pbx4 protein_coding protein_coding MGP_NODShiLtJ_T0088698.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78023408 78050889 + Pbx4 protein_coding retained_intron MGP_NODShiLtJ_T0088699.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78023421 78064035 + MGP_NODShiLtJ_P0088699 Pbx4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088700.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78023444 78062429 + MGP_NODShiLtJ_P0088700 Pbx4 protein_coding protein_coding MGP_NODShiLtJ_T0088701.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78023446 78064035 + MGP_NODShiLtJ_P0088701 Pbx4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088702.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78023474 78064035 + MGP_NODShiLtJ_P0088702 Pbx4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088703.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78039676 78056182 + Pbx4 protein_coding processed_transcript MGP_NODShiLtJ_T0088704.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78057315 78062381 + Pbx4 protein_coding retained_intron MGP_NODShiLtJ_T0088705.1 MGP_NODShiLtJ_G0033485.1 mouse_genomes_project 8 78057489 78064035 + Pbx4 protein_coding retained_intron MGP_NODShiLtJ_T0090457.1 MGP_NODShiLtJ_G0034048.1 mouse_genomes_project 8 137962325 137992905 + MGP_NODShiLtJ_P0090457 Dpep1 protein_coding protein_coding MGP_NODShiLtJ_T0089253.1 MGP_NODShiLtJ_G0033667.1 mouse_genomes_project 8 94018349 94021953 - Ccdc130 protein_coding retained_intron MGP_NODShiLtJ_T0089254.1 MGP_NODShiLtJ_G0033667.1 mouse_genomes_project 8 94018528 94030431 - MGP_NODShiLtJ_P0089254 Ccdc130 protein_coding protein_coding MGP_NODShiLtJ_T0089255.1 MGP_NODShiLtJ_G0033667.1 mouse_genomes_project 8 94019161 94026866 - MGP_NODShiLtJ_P0089255 Ccdc130 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089256.1 MGP_NODShiLtJ_G0033667.1 mouse_genomes_project 8 94020442 94022192 - Ccdc130 protein_coding retained_intron MGP_NODShiLtJ_T0089257.1 MGP_NODShiLtJ_G0033667.1 mouse_genomes_project 8 94023953 94030422 - MGP_NODShiLtJ_P0089257 Ccdc130 protein_coding protein_coding MGP_NODShiLtJ_T0089258.1 MGP_NODShiLtJ_G0033667.1 mouse_genomes_project 8 94024228 94030419 - Ccdc130 protein_coding retained_intron MGP_NODShiLtJ_T0090602.1 MGP_NODShiLtJ_G0034094.1 mouse_genomes_project 8 140942833 140980039 + MGP_NODShiLtJ_P0090602 BC021891 protein_coding protein_coding MGP_NODShiLtJ_T0088152.1 MGP_NODShiLtJ_G0033316.1 mouse_genomes_project 8 27173705 27235423 + MGP_NODShiLtJ_P0088152 protein_coding protein_coding MGP_NODShiLtJ_T0008985.1 MGP_NODShiLtJ_G0007221.1 mouse_genomes_project 8 9216896 9272042 + 9530052E02Rik lincRNA lincRNA MGP_NODShiLtJ_T0008986.1 MGP_NODShiLtJ_G0007221.1 mouse_genomes_project 8 9267083 9272047 + 9530052E02Rik lincRNA lincRNA MGP_NODShiLtJ_T0088927.1 MGP_NODShiLtJ_G0033556.1 mouse_genomes_project 8 79796649 79797476 + MGP_NODShiLtJ_P0088927 Mrpl34 protein_coding protein_coding MGP_NODShiLtJ_T0089382.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94890467 94897411 + MGP_NODShiLtJ_P0089382 Fbxw9 protein_coding protein_coding MGP_NODShiLtJ_T0089383.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94890468 94897413 + Fbxw9 protein_coding retained_intron MGP_NODShiLtJ_T0089384.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94890509 94895096 + Fbxw9 protein_coding retained_intron MGP_NODShiLtJ_T0089385.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94890941 94897406 + Fbxw9 protein_coding retained_intron MGP_NODShiLtJ_T0089386.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94890979 94897176 + Fbxw9 protein_coding processed_transcript MGP_NODShiLtJ_T0089387.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94894878 94896620 + Fbxw9 protein_coding retained_intron MGP_NODShiLtJ_T0089388.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94895862 94896657 + Fbxw9 protein_coding processed_transcript MGP_NODShiLtJ_T0089389.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94895916 94896659 + Fbxw9 protein_coding retained_intron MGP_NODShiLtJ_T0089390.1 MGP_NODShiLtJ_G0033695.1 mouse_genomes_project 8 94896357 94897193 + Fbxw9 protein_coding retained_intron MGP_NODShiLtJ_T0005320.1 MGP_NODShiLtJ_G0004504.1 mouse_genomes_project 8 110396213 110419558 + Gm15679 antisense antisense MGP_NODShiLtJ_T0090024.1 MGP_NODShiLtJ_G0033922.1 mouse_genomes_project 8 123609029 123619365 + MGP_NODShiLtJ_P0090024 Zfp612 protein_coding protein_coding MGP_NODShiLtJ_T0088231.1 MGP_NODShiLtJ_G0033349.1 mouse_genomes_project 8 36997034 37030561 - MGP_NODShiLtJ_P0088231 Lonrf1 protein_coding protein_coding MGP_NODShiLtJ_T0087701.1 MGP_NODShiLtJ_G0033151.1 mouse_genomes_project 8 8120410 8163923 + MGP_NODShiLtJ_P0087701 Tnfsf13b protein_coding protein_coding MGP_NODShiLtJ_T0009119.1 MGP_NODShiLtJ_G0007319.1 mouse_genomes_project 8 136540439 136541266 - lincRNA lincRNA MGP_NODShiLtJ_T0010851.1 MGP_NODShiLtJ_G0008984.1 mouse_genomes_project 8 22348825 22348915 - Mir3107 miRNA miRNA MGP_NODShiLtJ_T0088711.1 MGP_NODShiLtJ_G0033488.1 mouse_genomes_project 8 78086448 78094828 - MGP_NODShiLtJ_P0088711 Ndufa13 protein_coding protein_coding MGP_NODShiLtJ_T0089048.1 MGP_NODShiLtJ_G0033595.1 mouse_genomes_project 8 81088430 81142889 + MGP_NODShiLtJ_P0089048 Nwd1 protein_coding protein_coding MGP_NODShiLtJ_T0089049.1 MGP_NODShiLtJ_G0033595.1 mouse_genomes_project 8 81088441 81157173 + MGP_NODShiLtJ_P0089049 Nwd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089050.1 MGP_NODShiLtJ_G0033595.1 mouse_genomes_project 8 81088457 81161060 + MGP_NODShiLtJ_P0089050 Nwd1 protein_coding protein_coding MGP_NODShiLtJ_T0089051.1 MGP_NODShiLtJ_G0033595.1 mouse_genomes_project 8 81088490 81163915 + MGP_NODShiLtJ_P0089051 Nwd1 protein_coding protein_coding MGP_NODShiLtJ_T0089052.1 MGP_NODShiLtJ_G0033595.1 mouse_genomes_project 8 81096322 81157243 + MGP_NODShiLtJ_P0089052 Nwd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089053.1 MGP_NODShiLtJ_G0033595.1 mouse_genomes_project 8 81099922 81157204 + MGP_NODShiLtJ_P0089053 Nwd1 protein_coding protein_coding MGP_NODShiLtJ_T0089054.1 MGP_NODShiLtJ_G0033595.1 mouse_genomes_project 8 81130994 81142286 + Nwd1 protein_coding processed_transcript MGP_NODShiLtJ_T0002279.1 MGP_NODShiLtJ_G0002190.1 mouse_genomes_project 8 11687301 11689416 - TEC TEC MGP_NODShiLtJ_T0089504.1 MGP_NODShiLtJ_G0033730.1 mouse_genomes_project 8 99259122 99259629 - MGP_NODShiLtJ_P0089504 protein_coding protein_coding MGP_NODShiLtJ_T0002294.1 MGP_NODShiLtJ_G0002204.1 mouse_genomes_project 8 135303367 135304234 + TEC TEC MGP_NODShiLtJ_T0090025.1 MGP_NODShiLtJ_G0033923.1 mouse_genomes_project 8 123612067 123634579 - MGP_NODShiLtJ_P0090025 Gm17720 protein_coding protein_coding MGP_NODShiLtJ_T0089329.1 MGP_NODShiLtJ_G0033681.1 mouse_genomes_project 8 94674363 94690985 + MGP_NODShiLtJ_P0089329 Syce2 protein_coding protein_coding MGP_NODShiLtJ_T0089330.1 MGP_NODShiLtJ_G0033681.1 mouse_genomes_project 8 94674363 94691750 + MGP_NODShiLtJ_P0089330 Syce2 protein_coding protein_coding MGP_NODShiLtJ_T0089331.1 MGP_NODShiLtJ_G0033681.1 mouse_genomes_project 8 94674448 94690995 + MGP_NODShiLtJ_P0089331 Syce2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089332.1 MGP_NODShiLtJ_G0033681.1 mouse_genomes_project 8 94674693 94689520 + Syce2 protein_coding retained_intron MGP_NODShiLtJ_T0089930.1 MGP_NODShiLtJ_G0033890.1 mouse_genomes_project 8 120050161 120062866 + MGP_NODShiLtJ_P0089930 Has3 protein_coding protein_coding MGP_NODShiLtJ_T0089931.1 MGP_NODShiLtJ_G0033890.1 mouse_genomes_project 8 120050755 120061163 + MGP_NODShiLtJ_P0089931 Has3 protein_coding protein_coding MGP_NODShiLtJ_T0089932.1 MGP_NODShiLtJ_G0033890.1 mouse_genomes_project 8 120050810 120064530 + MGP_NODShiLtJ_P0089932 Has3 protein_coding protein_coding MGP_NODShiLtJ_T0010909.1 MGP_NODShiLtJ_G0009042.1 mouse_genomes_project 8 125107803 125107926 + Mir1957b miRNA miRNA MGP_NODShiLtJ_T0089412.1 MGP_NODShiLtJ_G0033700.1 mouse_genomes_project 8 94914339 94933630 + MGP_NODShiLtJ_P0089412 Man2b1 protein_coding protein_coding MGP_NODShiLtJ_T0088842.1 MGP_NODShiLtJ_G0033523.1 mouse_genomes_project 8 78941082 78946408 + MGP_NODShiLtJ_P0088842 Lsm4 protein_coding protein_coding MGP_NODShiLtJ_T0088843.1 MGP_NODShiLtJ_G0033523.1 mouse_genomes_project 8 78941266 78945704 + MGP_NODShiLtJ_P0088843 Lsm4 protein_coding protein_coding MGP_NODShiLtJ_T0088844.1 MGP_NODShiLtJ_G0033523.1 mouse_genomes_project 8 78945320 78945772 + Lsm4 protein_coding retained_intron MGP_NODShiLtJ_T0009005.1 MGP_NODShiLtJ_G0007236.1 mouse_genomes_project 8 33384717 33446142 - Gm3985 lincRNA lincRNA MGP_NODShiLtJ_T0009006.1 MGP_NODShiLtJ_G0007236.1 mouse_genomes_project 8 33386692 33439201 - Gm3985 lincRNA lincRNA MGP_NODShiLtJ_T0088671.1 MGP_NODShiLtJ_G0033475.1 mouse_genomes_project 8 77555701 77556100 - MGP_NODShiLtJ_P0088671 protein_coding protein_coding MGP_NODShiLtJ_T0009013.1 MGP_NODShiLtJ_G0007241.1 mouse_genomes_project 8 34963037 34988005 + lincRNA lincRNA MGP_NODShiLtJ_T0089776.1 MGP_NODShiLtJ_G0033828.1 mouse_genomes_project 8 118014337 118023431 + MGP_NODShiLtJ_P0089776 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0005308.1 MGP_NODShiLtJ_G0004494.1 mouse_genomes_project 8 76404774 76408632 + 1700125H03Rik antisense antisense MGP_NODShiLtJ_T0005309.1 MGP_NODShiLtJ_G0004494.1 mouse_genomes_project 8 76404806 76412053 + 1700125H03Rik antisense antisense MGP_NODShiLtJ_T0005315.1 MGP_NODShiLtJ_G0004499.1 mouse_genomes_project 8 89838837 89841469 - 4930505O20Rik antisense antisense MGP_NODShiLtJ_T0090165.1 MGP_NODShiLtJ_G0033966.1 mouse_genomes_project 8 129811981 129837426 - MGP_NODShiLtJ_P0090165 Maf protein_coding protein_coding MGP_NODShiLtJ_T0090166.1 MGP_NODShiLtJ_G0033966.1 mouse_genomes_project 8 129830629 129838230 - MGP_NODShiLtJ_P0090166 Maf protein_coding protein_coding MGP_NODShiLtJ_T0089095.1 MGP_NODShiLtJ_G0033609.1 mouse_genomes_project 8 86759096 86825020 - MGP_NODShiLtJ_P0089095 Ednra protein_coding protein_coding MGP_NODShiLtJ_T0089096.1 MGP_NODShiLtJ_G0033609.1 mouse_genomes_project 8 86765766 86825048 - Ednra protein_coding retained_intron MGP_NODShiLtJ_T0010863.1 MGP_NODShiLtJ_G0008996.1 mouse_genomes_project 8 79073717 79073775 + Mir7240 miRNA miRNA MGP_NODShiLtJ_T0089773.1 MGP_NODShiLtJ_G0033825.1 mouse_genomes_project 8 117927533 117936057 + MGP_NODShiLtJ_P0089773 Ces2f protein_coding protein_coding MGP_NODShiLtJ_T0005322.1 MGP_NODShiLtJ_G0004506.1 mouse_genomes_project 8 117546098 117569988 + 1700082M22Rik antisense antisense MGP_NODShiLtJ_T0005323.1 MGP_NODShiLtJ_G0004506.1 mouse_genomes_project 8 117564017 117569848 + 1700082M22Rik antisense antisense MGP_NODShiLtJ_T0011599.1 MGP_NODShiLtJ_G0009732.1 mouse_genomes_project 8 5409328 5409527 + Gm27585 misc_RNA misc_RNA MGP_NODShiLtJ_T0089358.1 MGP_NODShiLtJ_G0033687.1 mouse_genomes_project 8 94768116 94787927 - MGP_NODShiLtJ_P0089358 Rnaseh2a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089359.1 MGP_NODShiLtJ_G0033687.1 mouse_genomes_project 8 94769205 94787237 - MGP_NODShiLtJ_P0089359 Rnaseh2a protein_coding protein_coding MGP_NODShiLtJ_T0089360.1 MGP_NODShiLtJ_G0033687.1 mouse_genomes_project 8 94769205 94787260 - MGP_NODShiLtJ_P0089360 Rnaseh2a protein_coding protein_coding MGP_NODShiLtJ_T0089361.1 MGP_NODShiLtJ_G0033687.1 mouse_genomes_project 8 94769216 94769654 - Rnaseh2a protein_coding retained_intron MGP_NODShiLtJ_T0089362.1 MGP_NODShiLtJ_G0033687.1 mouse_genomes_project 8 94769511 94787157 - Rnaseh2a protein_coding retained_intron MGP_NODShiLtJ_T0089363.1 MGP_NODShiLtJ_G0033687.1 mouse_genomes_project 8 94786802 94790899 - MGP_NODShiLtJ_P0089363 Rnaseh2a protein_coding protein_coding MGP_NODShiLtJ_T0089364.1 MGP_NODShiLtJ_G0033687.1 mouse_genomes_project 8 94787147 94788073 - MGP_NODShiLtJ_P0089364 Rnaseh2a protein_coding protein_coding MGP_NODShiLtJ_T0089365.1 MGP_NODShiLtJ_G0033687.1 mouse_genomes_project 8 94787424 94790714 - Rnaseh2a protein_coding processed_transcript MGP_NODShiLtJ_T0089894.1 MGP_NODShiLtJ_G0033876.1 mouse_genomes_project 8 119087564 119114061 + MGP_NODShiLtJ_P0089894 Dus2 protein_coding protein_coding MGP_NODShiLtJ_T0089896.1 MGP_NODShiLtJ_G0033876.1 mouse_genomes_project 8 119108799 119154968 + MGP_NODShiLtJ_P0089896 Dus2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089897.1 MGP_NODShiLtJ_G0033876.1 mouse_genomes_project 8 119108799 119154947 + MGP_NODShiLtJ_P0089897 Dus2 protein_coding protein_coding MGP_NODShiLtJ_T0089898.1 MGP_NODShiLtJ_G0033876.1 mouse_genomes_project 8 119108814 119129349 + Dus2 protein_coding retained_intron MGP_NODShiLtJ_T0089899.1 MGP_NODShiLtJ_G0033876.1 mouse_genomes_project 8 119131628 119145288 + Dus2 protein_coding retained_intron MGP_NODShiLtJ_T0089900.1 MGP_NODShiLtJ_G0033876.1 mouse_genomes_project 8 119149835 119153327 + Dus2 protein_coding retained_intron MGP_NODShiLtJ_T0087895.1 MGP_NODShiLtJ_G0033209.1 mouse_genomes_project 8 17474312 17691671 + MGP_NODShiLtJ_P0087895 Mcph1 protein_coding protein_coding MGP_NODShiLtJ_T0087896.1 MGP_NODShiLtJ_G0033209.1 mouse_genomes_project 8 17474345 17597906 + MGP_NODShiLtJ_P0087896 Mcph1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087897.1 MGP_NODShiLtJ_G0033209.1 mouse_genomes_project 8 17474759 17573355 + Mcph1 protein_coding retained_intron MGP_NODShiLtJ_T0087898.1 MGP_NODShiLtJ_G0033209.1 mouse_genomes_project 8 17474765 17513575 + MGP_NODShiLtJ_P0087898 Mcph1 protein_coding protein_coding MGP_NODShiLtJ_T0087899.1 MGP_NODShiLtJ_G0033209.1 mouse_genomes_project 8 17506236 17512554 + MGP_NODShiLtJ_P0087899 Mcph1 protein_coding protein_coding MGP_NODShiLtJ_T0087900.1 MGP_NODShiLtJ_G0033209.1 mouse_genomes_project 8 17513265 17534661 + MGP_NODShiLtJ_P0087900 Mcph1 protein_coding protein_coding MGP_NODShiLtJ_T0008991.1 MGP_NODShiLtJ_G0007226.1 mouse_genomes_project 8 11592381 11600792 + 2810030D12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008992.1 MGP_NODShiLtJ_G0007226.1 mouse_genomes_project 8 11592389 11600804 + 2810030D12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008993.1 MGP_NODShiLtJ_G0007226.1 mouse_genomes_project 8 11592413 11593452 + 2810030D12Rik lincRNA lincRNA MGP_NODShiLtJ_T0008994.1 MGP_NODShiLtJ_G0007226.1 mouse_genomes_project 8 11592481 11600797 + 2810030D12Rik lincRNA lincRNA MGP_NODShiLtJ_T0015837.1 MGP_NODShiLtJ_G0013945.1 mouse_genomes_project 8 20153010 20178877 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0102216.1 MGP_NODShiLtJ_G0040382.1 mouse_genomes_project 8 211 2301 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0088878.1 MGP_NODShiLtJ_G0033543.1 mouse_genomes_project 8 79443903 79478956 + MGP_NODShiLtJ_P0088878 protein_coding protein_coding MGP_NODShiLtJ_T0011608.1 MGP_NODShiLtJ_G0009741.1 mouse_genomes_project 8 72435400 72435491 + Gm26210 misc_RNA misc_RNA MGP_NODShiLtJ_T0087842.1 MGP_NODShiLtJ_G0033194.1 mouse_genomes_project 8 12343725 12363522 + MGP_NODShiLtJ_P0087842 Champ1 protein_coding protein_coding MGP_NODShiLtJ_T0087843.1 MGP_NODShiLtJ_G0033194.1 mouse_genomes_project 8 12343788 12361694 + MGP_NODShiLtJ_P0087843 Champ1 protein_coding protein_coding MGP_NODShiLtJ_T0009123.1 MGP_NODShiLtJ_G0007322.1 mouse_genomes_project 8 138599694 138613218 - 4732419C18Rik lincRNA lincRNA MGP_NODShiLtJ_T0090143.1 MGP_NODShiLtJ_G0033960.1 mouse_genomes_project 8 127584744 127597028 + MGP_NODShiLtJ_P0090143 Syce1l protein_coding protein_coding MGP_NODShiLtJ_T0090144.1 MGP_NODShiLtJ_G0033960.1 mouse_genomes_project 8 127584744 127597028 + MGP_NODShiLtJ_P0090144 Syce1l protein_coding protein_coding MGP_NODShiLtJ_T0088160.1 MGP_NODShiLtJ_G0033319.1 mouse_genomes_project 8 31392076 31412853 + MGP_NODShiLtJ_P0088160 Rnf122 protein_coding protein_coding MGP_NODShiLtJ_T0088161.1 MGP_NODShiLtJ_G0033319.1 mouse_genomes_project 8 31392086 31402332 + Rnf122 protein_coding retained_intron MGP_NODShiLtJ_T0088162.1 MGP_NODShiLtJ_G0033319.1 mouse_genomes_project 8 31392404 31410057 + MGP_NODShiLtJ_P0088162 Rnf122 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0102229.1 MGP_NODShiLtJ_G0040395.1 mouse_genomes_project 8 20839880 20840707 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0089913.1 MGP_NODShiLtJ_G0033881.1 mouse_genomes_project 8 119296700 119327872 + MGP_NODShiLtJ_P0089913 Slc7a6 protein_coding protein_coding MGP_NODShiLtJ_T0100790.1 MGP_NODShiLtJ_G0039184.1 mouse_genomes_project 8 5559012 5559141 + Gm25169 snoRNA snoRNA MGP_NODShiLtJ_T0090124.1 MGP_NODShiLtJ_G0033951.1 mouse_genomes_project 8 125619899 125634485 - MGP_NODShiLtJ_P0090124 Tmem170 protein_coding protein_coding MGP_NODShiLtJ_T0009110.1 MGP_NODShiLtJ_G0007312.1 mouse_genomes_project 8 135855625 135858747 - 5033426O07Rik lincRNA lincRNA MGP_NODShiLtJ_T0089858.1 MGP_NODShiLtJ_G0033858.1 mouse_genomes_project 8 118762747 118765134 + MGP_NODShiLtJ_P0089858 Pard6a protein_coding protein_coding MGP_NODShiLtJ_T0089859.1 MGP_NODShiLtJ_G0033858.1 mouse_genomes_project 8 118763287 118765133 + MGP_NODShiLtJ_P0089859 Pard6a protein_coding protein_coding MGP_NODShiLtJ_T0089310.1 MGP_NODShiLtJ_G0033676.1 mouse_genomes_project 8 94634048 94638049 + MGP_NODShiLtJ_P0089310 Gadd45gip1 protein_coding protein_coding MGP_NODShiLtJ_T0088953.1 MGP_NODShiLtJ_G0033565.1 mouse_genomes_project 8 79910840 79930292 + MGP_NODShiLtJ_P0088953 Slc27a1 protein_coding protein_coding MGP_NODShiLtJ_T0088173.1 MGP_NODShiLtJ_G0033327.1 mouse_genomes_project 8 33905978 33936896 + MGP_NODShiLtJ_P0088173 Purg protein_coding protein_coding MGP_NODShiLtJ_T0088174.1 MGP_NODShiLtJ_G0033327.1 mouse_genomes_project 8 33905978 33907185 + MGP_NODShiLtJ_P0088174 Purg protein_coding protein_coding MGP_NODShiLtJ_T0090354.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136636962 136684649 + MGP_NODShiLtJ_P0090354 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090355.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136637704 136714616 + MGP_NODShiLtJ_P0090355 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090356.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136637756 136717733 + MGP_NODShiLtJ_P0090356 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090357.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136637787 136684647 + MGP_NODShiLtJ_P0090357 Banp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090358.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136637792 136714376 + MGP_NODShiLtJ_P0090358 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090359.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136637797 136679032 + MGP_NODShiLtJ_P0090359 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090360.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136637808 136679023 + MGP_NODShiLtJ_P0090360 Banp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090361.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136637817 136679049 + MGP_NODShiLtJ_P0090361 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090362.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136662238 136664292 + Banp protein_coding retained_intron MGP_NODShiLtJ_T0090363.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136662286 136714074 + MGP_NODShiLtJ_P0090363 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090364.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136666126 136677465 + Banp protein_coding retained_intron MGP_NODShiLtJ_T0090365.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136678920 136684704 + Banp protein_coding retained_intron MGP_NODShiLtJ_T0090366.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136679066 136714397 + MGP_NODShiLtJ_P0090366 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090367.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136684554 136714046 + MGP_NODShiLtJ_P0090367 Banp protein_coding protein_coding MGP_NODShiLtJ_T0090368.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136688133 136709080 + Banp protein_coding processed_transcript MGP_NODShiLtJ_T0090369.1 MGP_NODShiLtJ_G0034023.1 mouse_genomes_project 8 136688311 136695617 + Banp protein_coding retained_intron MGP_NODShiLtJ_T0088436.1 MGP_NODShiLtJ_G0033403.1 mouse_genomes_project 8 50420901 50454677 + MGP_NODShiLtJ_P0088436 Rwdd4a protein_coding protein_coding MGP_NODShiLtJ_T0088437.1 MGP_NODShiLtJ_G0033403.1 mouse_genomes_project 8 50420901 50453131 + MGP_NODShiLtJ_P0088437 Rwdd4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088438.1 MGP_NODShiLtJ_G0033403.1 mouse_genomes_project 8 50420923 50443176 + MGP_NODShiLtJ_P0088438 Rwdd4a protein_coding protein_coding MGP_NODShiLtJ_T0088439.1 MGP_NODShiLtJ_G0033403.1 mouse_genomes_project 8 50448563 50453142 + Rwdd4a protein_coding processed_transcript MGP_NODShiLtJ_T0088440.1 MGP_NODShiLtJ_G0033403.1 mouse_genomes_project 8 50452309 50454807 + Rwdd4a protein_coding retained_intron MGP_NODShiLtJ_T0088305.1 MGP_NODShiLtJ_G0033367.1 mouse_genomes_project 8 43056111 43127695 + MGP_NODShiLtJ_P0088305 Pcm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088306.1 MGP_NODShiLtJ_G0033367.1 mouse_genomes_project 8 43056162 43188907 + MGP_NODShiLtJ_P0088306 Pcm1 protein_coding protein_coding MGP_NODShiLtJ_T0015894.1 MGP_NODShiLtJ_G0014002.1 mouse_genomes_project 8 120237190 120237865 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089844.1 MGP_NODShiLtJ_G0033853.1 mouse_genomes_project 8 118616498 118695459 - MGP_NODShiLtJ_P0089844 Agrp protein_coding protein_coding MGP_NODShiLtJ_T0089845.1 MGP_NODShiLtJ_G0033853.1 mouse_genomes_project 8 118616498 118618098 - MGP_NODShiLtJ_P0089845 Agrp protein_coding protein_coding MGP_NODShiLtJ_T0089846.1 MGP_NODShiLtJ_G0033853.1 mouse_genomes_project 8 118616598 118633121 - MGP_NODShiLtJ_P0089846 Agrp protein_coding protein_coding MGP_NODShiLtJ_T0089429.1 MGP_NODShiLtJ_G0033709.1 mouse_genomes_project 8 95393495 95412344 - MGP_NODShiLtJ_P0089429 Dnaja2 protein_coding protein_coding MGP_NODShiLtJ_T0100844.1 MGP_NODShiLtJ_G0039238.1 mouse_genomes_project 8 124421251 124421340 - Snord111 snoRNA snoRNA MGP_NODShiLtJ_T0088504.1 MGP_NODShiLtJ_G0033427.1 mouse_genomes_project 8 63113129 63138098 + MGP_NODShiLtJ_P0088504 Scrg1 protein_coding protein_coding MGP_NODShiLtJ_T0018302.1 MGP_NODShiLtJ_G0015581.1 mouse_genomes_project 8 62927819 62945959 - AV026068 processed_transcript retained_intron MGP_NODShiLtJ_T0018303.1 MGP_NODShiLtJ_G0015581.1 mouse_genomes_project 8 62927819 62946301 - AV026068 processed_transcript lincRNA MGP_NODShiLtJ_T0018304.1 MGP_NODShiLtJ_G0015581.1 mouse_genomes_project 8 62927819 62946424 - AV026068 processed_transcript lincRNA MGP_NODShiLtJ_T0018305.1 MGP_NODShiLtJ_G0015581.1 mouse_genomes_project 8 62927819 62945883 - AV026068 processed_transcript lincRNA MGP_NODShiLtJ_T0018306.1 MGP_NODShiLtJ_G0015581.1 mouse_genomes_project 8 62927825 62928911 - AV026068 processed_transcript lincRNA MGP_NODShiLtJ_T0018307.1 MGP_NODShiLtJ_G0015581.1 mouse_genomes_project 8 62928795 62946395 - AV026068 processed_transcript retained_intron MGP_NODShiLtJ_T0018308.1 MGP_NODShiLtJ_G0015581.1 mouse_genomes_project 8 62930501 62946333 - AV026068 processed_transcript retained_intron MGP_NODShiLtJ_T0018309.1 MGP_NODShiLtJ_G0015581.1 mouse_genomes_project 8 62937850 62946314 - AV026068 processed_transcript retained_intron MGP_NODShiLtJ_T0087947.1 MGP_NODShiLtJ_G0033248.1 mouse_genomes_project 8 21082735 21087285 + MGP_NODShiLtJ_P0087947 Ccdc70 protein_coding protein_coding MGP_NODShiLtJ_T0087948.1 MGP_NODShiLtJ_G0033248.1 mouse_genomes_project 8 21083563 21087309 + MGP_NODShiLtJ_P0087948 Ccdc70 protein_coding protein_coding MGP_NODShiLtJ_T0087720.1 MGP_NODShiLtJ_G0033159.1 mouse_genomes_project 8 9817310 9826046 + MGP_NODShiLtJ_P0087720 Ing1 protein_coding protein_coding MGP_NODShiLtJ_T0015887.1 MGP_NODShiLtJ_G0013995.1 mouse_genomes_project 8 106146742 106148182 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089449.1 MGP_NODShiLtJ_G0033714.1 mouse_genomes_project 8 96570042 96665388 + MGP_NODShiLtJ_P0089449 Lonp2 protein_coding protein_coding MGP_NODShiLtJ_T0089450.1 MGP_NODShiLtJ_G0033714.1 mouse_genomes_project 8 96570042 96672631 + MGP_NODShiLtJ_P0089450 Lonp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089451.1 MGP_NODShiLtJ_G0033714.1 mouse_genomes_project 8 96570086 96588568 + Lonp2 protein_coding processed_transcript MGP_NODShiLtJ_T0089452.1 MGP_NODShiLtJ_G0033714.1 mouse_genomes_project 8 96570104 96665388 + MGP_NODShiLtJ_P0089452 Lonp2 protein_coding protein_coding MGP_NODShiLtJ_T0089453.1 MGP_NODShiLtJ_G0033714.1 mouse_genomes_project 8 96578298 96614246 + Lonp2 protein_coding processed_transcript MGP_NODShiLtJ_T0089454.1 MGP_NODShiLtJ_G0033714.1 mouse_genomes_project 8 96598470 96665389 + MGP_NODShiLtJ_P0089454 Lonp2 protein_coding protein_coding MGP_NODShiLtJ_T0089455.1 MGP_NODShiLtJ_G0033714.1 mouse_genomes_project 8 96598470 96665389 + MGP_NODShiLtJ_P0089455 Lonp2 protein_coding protein_coding MGP_NODShiLtJ_T0005305.1 MGP_NODShiLtJ_G0004491.1 mouse_genomes_project 8 74139984 74142898 - Gm15354 antisense antisense MGP_NODShiLtJ_T0089155.1 MGP_NODShiLtJ_G0033631.1 mouse_genomes_project 8 92825586 92826680 - MGP_NODShiLtJ_P0089155 Gm10645 protein_coding protein_coding MGP_NODShiLtJ_T0089730.1 MGP_NODShiLtJ_G0033808.1 mouse_genomes_project 8 117157125 117182480 - MGP_NODShiLtJ_P0089730 protein_coding protein_coding MGP_NODShiLtJ_T0089731.1 MGP_NODShiLtJ_G0033808.1 mouse_genomes_project 8 117157426 117182458 - MGP_NODShiLtJ_P0089731 protein_coding protein_coding MGP_NODShiLtJ_T0089732.1 MGP_NODShiLtJ_G0033808.1 mouse_genomes_project 8 117158045 117182571 - MGP_NODShiLtJ_P0089732 protein_coding protein_coding MGP_NODShiLtJ_T0009072.1 MGP_NODShiLtJ_G0007288.1 mouse_genomes_project 8 102681871 102712305 - Crnde lincRNA lincRNA MGP_NODShiLtJ_T0009073.1 MGP_NODShiLtJ_G0007288.1 mouse_genomes_project 8 102681871 102712016 - Crnde lincRNA lincRNA MGP_NODShiLtJ_T0009074.1 MGP_NODShiLtJ_G0007288.1 mouse_genomes_project 8 102681871 102702515 - Crnde lincRNA lincRNA MGP_NODShiLtJ_T0009075.1 MGP_NODShiLtJ_G0007288.1 mouse_genomes_project 8 102682083 102712076 - Crnde lincRNA lincRNA MGP_NODShiLtJ_T0009076.1 MGP_NODShiLtJ_G0007288.1 mouse_genomes_project 8 102691978 102711949 - Crnde lincRNA lincRNA MGP_NODShiLtJ_T0009078.1 MGP_NODShiLtJ_G0007288.1 mouse_genomes_project 8 102700542 102702515 - Crnde lincRNA lincRNA MGP_NODShiLtJ_T0009079.1 MGP_NODShiLtJ_G0007288.1 mouse_genomes_project 8 102702575 102712054 - Crnde lincRNA lincRNA MGP_NODShiLtJ_T0089986.1 MGP_NODShiLtJ_G0033906.1 mouse_genomes_project 8 120876569 120884521 - MGP_NODShiLtJ_P0089986 Psmd7 protein_coding protein_coding MGP_NODShiLtJ_T0002295.1 MGP_NODShiLtJ_G0002205.1 mouse_genomes_project 8 135794761 135795439 + TEC TEC MGP_NODShiLtJ_T0088416.1 MGP_NODShiLtJ_G0033396.1 mouse_genomes_project 8 49398635 49442015 - MGP_NODShiLtJ_P0088416 Primpol protein_coding protein_coding MGP_NODShiLtJ_T0088417.1 MGP_NODShiLtJ_G0033396.1 mouse_genomes_project 8 49399218 49442015 - Primpol protein_coding retained_intron MGP_NODShiLtJ_T0088418.1 MGP_NODShiLtJ_G0033396.1 mouse_genomes_project 8 49409693 49417504 - Primpol protein_coding processed_transcript MGP_NODShiLtJ_T0088419.1 MGP_NODShiLtJ_G0033396.1 mouse_genomes_project 8 49429970 49437830 - MGP_NODShiLtJ_P0088419 Primpol protein_coding protein_coding MGP_NODShiLtJ_T0088420.1 MGP_NODShiLtJ_G0033396.1 mouse_genomes_project 8 49435592 49442027 - Primpol protein_coding retained_intron MGP_NODShiLtJ_T0099548.1 MGP_NODShiLtJ_G0037942.1 mouse_genomes_project 8 58158046 58158108 + Gm22841 snRNA snRNA MGP_NODShiLtJ_T0087930.1 MGP_NODShiLtJ_G0033231.1 mouse_genomes_project 8 20389526 20390506 + MGP_NODShiLtJ_P0087930 Gm15292 protein_coding protein_coding MGP_NODShiLtJ_T0088289.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42799856 42958724 - MGP_NODShiLtJ_P0088289 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0088290.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42799860 42872896 - MGP_NODShiLtJ_P0088290 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0088291.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42799860 42938925 - MGP_NODShiLtJ_P0088291 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0088292.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42799994 42859991 - MGP_NODShiLtJ_P0088292 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0088293.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42814188 42815624 - Mtus1 protein_coding retained_intron MGP_NODShiLtJ_T0088294.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42816094 42833084 - Mtus1 protein_coding processed_transcript MGP_NODShiLtJ_T0088295.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42816251 42833098 - MGP_NODShiLtJ_P0088295 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0088296.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42817770 42832649 - MGP_NODShiLtJ_P0088296 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0088297.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42830669 42856870 - Mtus1 protein_coding processed_transcript MGP_NODShiLtJ_T0088298.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42835293 42872885 - Mtus1 protein_coding processed_transcript MGP_NODShiLtJ_T0088299.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42835854 42839189 - Mtus1 protein_coding retained_intron MGP_NODShiLtJ_T0088300.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42868129 42902333 - MGP_NODShiLtJ_P0088300 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0088301.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42868244 42958724 - MGP_NODShiLtJ_P0088301 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0088302.1 MGP_NODShiLtJ_G0033365.1 mouse_genomes_project 8 42904119 42958716 - MGP_NODShiLtJ_P0088302 Mtus1 protein_coding protein_coding MGP_NODShiLtJ_T0089547.1 MGP_NODShiLtJ_G0033745.1 mouse_genomes_project 8 103454238 103478255 - MGP_NODShiLtJ_P0089547 Ces1b protein_coding protein_coding MGP_NODShiLtJ_T0090009.1 MGP_NODShiLtJ_G0033916.1 mouse_genomes_project 8 123230081 123241364 - MGP_NODShiLtJ_P0090009 Atxn1l protein_coding protein_coding MGP_NODShiLtJ_T0088590.1 MGP_NODShiLtJ_G0033451.1 mouse_genomes_project 8 72481720 72487715 - MGP_NODShiLtJ_P0088590 Trim75 protein_coding protein_coding MGP_NODShiLtJ_T0087738.1 MGP_NODShiLtJ_G0033166.1 mouse_genomes_project 8 10915315 10938489 - MGP_NODShiLtJ_P0087738 protein_coding protein_coding MGP_NODShiLtJ_T0089882.1 MGP_NODShiLtJ_G0033872.1 mouse_genomes_project 8 119032935 119036574 - MGP_NODShiLtJ_P0089882 Lcat protein_coding protein_coding MGP_NODShiLtJ_T0088380.1 MGP_NODShiLtJ_G0033389.1 mouse_genomes_project 8 48749619 48786630 + MGP_NODShiLtJ_P0088380 Lrp2bp protein_coding protein_coding MGP_NODShiLtJ_T0088381.1 MGP_NODShiLtJ_G0033389.1 mouse_genomes_project 8 48749624 48786361 + MGP_NODShiLtJ_P0088381 Lrp2bp protein_coding protein_coding MGP_NODShiLtJ_T0088382.1 MGP_NODShiLtJ_G0033389.1 mouse_genomes_project 8 48765148 48788452 + MGP_NODShiLtJ_P0088382 Lrp2bp protein_coding protein_coding MGP_NODShiLtJ_T0088383.1 MGP_NODShiLtJ_G0033389.1 mouse_genomes_project 8 48765157 48786618 + MGP_NODShiLtJ_P0088383 Lrp2bp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088384.1 MGP_NODShiLtJ_G0033389.1 mouse_genomes_project 8 48766296 48778114 + Lrp2bp protein_coding processed_transcript MGP_NODShiLtJ_T0088385.1 MGP_NODShiLtJ_G0033389.1 mouse_genomes_project 8 48779861 48788423 + Lrp2bp protein_coding processed_transcript MGP_NODShiLtJ_T0088191.1 MGP_NODShiLtJ_G0033334.1 mouse_genomes_project 8 34282837 34289965 - MGP_NODShiLtJ_P0088191 Smim18 protein_coding protein_coding MGP_NODShiLtJ_T0102228.1 MGP_NODShiLtJ_G0040394.1 mouse_genomes_project 8 20783130 20783298 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0089041.1 MGP_NODShiLtJ_G0033591.1 mouse_genomes_project 8 80941425 80954003 - MGP_NODShiLtJ_P0089041 Slc35e1 protein_coding protein_coding MGP_NODShiLtJ_T0089042.1 MGP_NODShiLtJ_G0033591.1 mouse_genomes_project 8 80945358 80953606 - MGP_NODShiLtJ_P0089042 Slc35e1 protein_coding protein_coding MGP_NODShiLtJ_T0100830.1 MGP_NODShiLtJ_G0039224.1 mouse_genomes_project 8 92006761 92006897 + Gm25138 snoRNA snoRNA MGP_NODShiLtJ_T0090370.1 MGP_NODShiLtJ_G0034024.1 mouse_genomes_project 8 136977887 137033487 + MGP_NODShiLtJ_P0090370 Zfpm1 protein_coding protein_coding MGP_NODShiLtJ_T0090371.1 MGP_NODShiLtJ_G0034024.1 mouse_genomes_project 8 137003816 137020271 + Zfpm1 protein_coding processed_transcript MGP_NODShiLtJ_T0090372.1 MGP_NODShiLtJ_G0034024.1 mouse_genomes_project 8 137029932 137031265 + Zfpm1 protein_coding processed_transcript MGP_NODShiLtJ_T0090373.1 MGP_NODShiLtJ_G0034024.1 mouse_genomes_project 8 137030020 137031997 + MGP_NODShiLtJ_P0090373 Zfpm1 protein_coding protein_coding MGP_NODShiLtJ_T0005327.1 MGP_NODShiLtJ_G0004509.1 mouse_genomes_project 8 120229433 120230947 - Gm16208 antisense antisense MGP_NODShiLtJ_T0088795.1 MGP_NODShiLtJ_G0033508.1 mouse_genomes_project 8 78608331 78616810 + MGP_NODShiLtJ_P0088795 Comp protein_coding protein_coding MGP_NODShiLtJ_T0010861.1 MGP_NODShiLtJ_G0008994.1 mouse_genomes_project 8 75563535 75563628 - Gm44391 miRNA miRNA MGP_NODShiLtJ_T0089391.1 MGP_NODShiLtJ_G0033696.1 mouse_genomes_project 8 94897856 94898271 - MGP_NODShiLtJ_P0089391 Gm5741 protein_coding protein_coding MGP_NODShiLtJ_T0098092.1 MGP_NODShiLtJ_G0036504.1 mouse_genomes_project 8 36501299 36501413 + Gm22216 rRNA rRNA MGP_NODShiLtJ_T0087840.1 MGP_NODShiLtJ_G0033192.1 mouse_genomes_project 8 12312627 12315642 - MGP_NODShiLtJ_P0087840 protein_coding protein_coding MGP_NODShiLtJ_T0088854.1 MGP_NODShiLtJ_G0033528.1 mouse_genomes_project 8 79029927 79032752 + MGP_NODShiLtJ_P0088854 Rab3a protein_coding protein_coding MGP_NODShiLtJ_T0088855.1 MGP_NODShiLtJ_G0033528.1 mouse_genomes_project 8 79030528 79031771 + Rab3a protein_coding retained_intron MGP_NODShiLtJ_T0010880.1 MGP_NODShiLtJ_G0009013.1 mouse_genomes_project 8 93962918 93963023 + Mir24-2 miRNA miRNA MGP_NODShiLtJ_T0100789.1 MGP_NODShiLtJ_G0039183.1 mouse_genomes_project 8 3729839 3729983 - Gm24288 snoRNA snoRNA MGP_NODShiLtJ_T0009036.1 MGP_NODShiLtJ_G0007262.1 mouse_genomes_project 8 90303895 90310883 - Gm27048 lincRNA lincRNA MGP_NODShiLtJ_T0090328.1 MGP_NODShiLtJ_G0034017.1 mouse_genomes_project 8 136263334 136273999 + MGP_NODShiLtJ_P0090328 Map1lc3b protein_coding protein_coding MGP_NODShiLtJ_T0090329.1 MGP_NODShiLtJ_G0034017.1 mouse_genomes_project 8 136263450 136266083 + Map1lc3b protein_coding retained_intron MGP_NODShiLtJ_T0090330.1 MGP_NODShiLtJ_G0034017.1 mouse_genomes_project 8 136263454 136273169 + Map1lc3b protein_coding retained_intron MGP_NODShiLtJ_T0010856.1 MGP_NODShiLtJ_G0008989.1 mouse_genomes_project 8 42071509 42071564 - Mir7666 miRNA miRNA MGP_NODShiLtJ_T0088846.1 MGP_NODShiLtJ_G0033525.1 mouse_genomes_project 8 78968563 78969106 - MGP_NODShiLtJ_P0088846 protein_coding protein_coding MGP_NODShiLtJ_T0087841.1 MGP_NODShiLtJ_G0033193.1 mouse_genomes_project 8 12313693 12315578 - MGP_NODShiLtJ_P0087841 protein_coding protein_coding MGP_NODShiLtJ_T0087971.1 MGP_NODShiLtJ_G0033259.1 mouse_genomes_project 8 21610304 21625915 - MGP_NODShiLtJ_P0087971 Smim19 protein_coding protein_coding MGP_NODShiLtJ_T0087972.1 MGP_NODShiLtJ_G0033259.1 mouse_genomes_project 8 21610304 21625915 - MGP_NODShiLtJ_P0087972 Smim19 protein_coding protein_coding MGP_NODShiLtJ_T0088580.1 MGP_NODShiLtJ_G0033448.1 mouse_genomes_project 8 72211767 72230463 - MGP_NODShiLtJ_P0088580 Msmo1 protein_coding protein_coding MGP_NODShiLtJ_T0088581.1 MGP_NODShiLtJ_G0033448.1 mouse_genomes_project 8 72211837 72230252 - Msmo1 protein_coding processed_transcript MGP_NODShiLtJ_T0088582.1 MGP_NODShiLtJ_G0033448.1 mouse_genomes_project 8 72211855 72230249 - Msmo1 protein_coding retained_intron MGP_NODShiLtJ_T0088583.1 MGP_NODShiLtJ_G0033448.1 mouse_genomes_project 8 72212253 72215612 - Msmo1 protein_coding processed_transcript MGP_NODShiLtJ_T0088584.1 MGP_NODShiLtJ_G0033448.1 mouse_genomes_project 8 72219502 72227742 - MGP_NODShiLtJ_P0088584 Msmo1 protein_coding protein_coding MGP_NODShiLtJ_T0088585.1 MGP_NODShiLtJ_G0033448.1 mouse_genomes_project 8 72220823 72230219 - Msmo1 protein_coding retained_intron MGP_NODShiLtJ_T0088586.1 MGP_NODShiLtJ_G0033448.1 mouse_genomes_project 8 72224397 72230219 - MGP_NODShiLtJ_P0088586 Msmo1 protein_coding protein_coding MGP_NODShiLtJ_T0089824.1 MGP_NODShiLtJ_G0033846.1 mouse_genomes_project 8 118406910 118409197 + MGP_NODShiLtJ_P0089824 Plekhg4 protein_coding protein_coding MGP_NODShiLtJ_T0089825.1 MGP_NODShiLtJ_G0033846.1 mouse_genomes_project 8 118408540 118416496 + MGP_NODShiLtJ_P0089825 Plekhg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089826.1 MGP_NODShiLtJ_G0033846.1 mouse_genomes_project 8 118409017 118415878 + MGP_NODShiLtJ_P0089826 Plekhg4 protein_coding protein_coding MGP_NODShiLtJ_T0089827.1 MGP_NODShiLtJ_G0033846.1 mouse_genomes_project 8 118409017 118416499 + MGP_NODShiLtJ_P0089827 Plekhg4 protein_coding protein_coding MGP_NODShiLtJ_T0089828.1 MGP_NODShiLtJ_G0033846.1 mouse_genomes_project 8 118414130 118416492 + Plekhg4 protein_coding retained_intron MGP_NODShiLtJ_T0089105.1 MGP_NODShiLtJ_G0033612.1 mouse_genomes_project 8 87675019 87918425 + MGP_NODShiLtJ_P0089105 Slc10a7 protein_coding protein_coding MGP_NODShiLtJ_T0090231.1 MGP_NODShiLtJ_G0033994.1 mouse_genomes_project 8 134183478 134222941 + MGP_NODShiLtJ_P0090231 Wfdc1 protein_coding protein_coding MGP_NODShiLtJ_T0100813.1 MGP_NODShiLtJ_G0039207.1 mouse_genomes_project 8 52040092 52040224 - Gm25830 snoRNA snoRNA MGP_NODShiLtJ_T0005341.1 MGP_NODShiLtJ_G0004522.1 mouse_genomes_project 8 136213631 136214991 + Gm27045 antisense antisense MGP_NODShiLtJ_T0099557.1 MGP_NODShiLtJ_G0037951.1 mouse_genomes_project 8 91721039 91721102 - Gm25267 snRNA snRNA MGP_NODShiLtJ_T0088066.1 MGP_NODShiLtJ_G0033287.1 mouse_genomes_project 8 24542444 24591789 - MGP_NODShiLtJ_P0088066 Tacc1 protein_coding protein_coding MGP_NODShiLtJ_T0088067.1 MGP_NODShiLtJ_G0033287.1 mouse_genomes_project 8 24542444 24591789 - MGP_NODShiLtJ_P0088067 Tacc1 protein_coding protein_coding MGP_NODShiLtJ_T0089565.1 MGP_NODShiLtJ_G0033751.1 mouse_genomes_project 8 103758863 103771302 - MGP_NODShiLtJ_P0089565 Ces1h protein_coding protein_coding MGP_NODShiLtJ_T0097844.1 MGP_NODShiLtJ_G0036256.1 mouse_genomes_project 8 137151039 137153018 + pseudogene pseudogene MGP_NODShiLtJ_T0010841.1 MGP_NODShiLtJ_G0008974.1 mouse_genomes_project 8 11037848 11037952 + Gm26483 miRNA miRNA MGP_NODShiLtJ_T0088314.1 MGP_NODShiLtJ_G0033371.1 mouse_genomes_project 8 45541880 45552581 + MGP_NODShiLtJ_P0088314 Triml2 protein_coding protein_coding MGP_NODShiLtJ_T0090577.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140033002 140252699 + MGP_NODShiLtJ_P0090577 Disc1 protein_coding protein_coding MGP_NODShiLtJ_T0090578.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140033002 140253406 + MGP_NODShiLtJ_P0090578 Disc1 protein_coding protein_coding MGP_NODShiLtJ_T0090579.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140033002 140252699 + MGP_NODShiLtJ_P0090579 Disc1 protein_coding protein_coding MGP_NODShiLtJ_T0090580.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140033002 140253406 + MGP_NODShiLtJ_P0090580 Disc1 protein_coding protein_coding MGP_NODShiLtJ_T0090581.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140033002 140252699 + MGP_NODShiLtJ_P0090581 Disc1 protein_coding protein_coding MGP_NODShiLtJ_T0090582.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140033002 140252699 + MGP_NODShiLtJ_P0090582 Disc1 protein_coding protein_coding MGP_NODShiLtJ_T0090583.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140033016 140071632 + MGP_NODShiLtJ_P0090583 Disc1 protein_coding protein_coding MGP_NODShiLtJ_T0090584.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140033037 140252696 + MGP_NODShiLtJ_P0090584 Disc1 protein_coding protein_coding MGP_NODShiLtJ_T0090585.1 MGP_NODShiLtJ_G0034089.1 mouse_genomes_project 8 140068630 140084568 + Disc1 protein_coding processed_transcript MGP_NODShiLtJ_T0087912.1 MGP_NODShiLtJ_G0033215.1 mouse_genomes_project 8 17930970 17934105 - MGP_NODShiLtJ_P0087912 Defb38 protein_coding protein_coding MGP_NODShiLtJ_T0089862.1 MGP_NODShiLtJ_G0033861.1 mouse_genomes_project 8 118776308 118835271 - MGP_NODShiLtJ_P0089862 Gfod2 protein_coding protein_coding MGP_NODShiLtJ_T0089863.1 MGP_NODShiLtJ_G0033861.1 mouse_genomes_project 8 118779871 118835237 - MGP_NODShiLtJ_P0089863 Gfod2 protein_coding protein_coding MGP_NODShiLtJ_T0089864.1 MGP_NODShiLtJ_G0033861.1 mouse_genomes_project 8 118790635 118835203 - Gfod2 protein_coding processed_transcript MGP_NODShiLtJ_T0099563.1 MGP_NODShiLtJ_G0037957.1 mouse_genomes_project 8 108048060 108048162 + Gm25160 snRNA snRNA MGP_NODShiLtJ_T0089883.1 MGP_NODShiLtJ_G0033873.1 mouse_genomes_project 8 119036781 119060075 - MGP_NODShiLtJ_P0089883 Slc12a4 protein_coding protein_coding MGP_NODShiLtJ_T0089884.1 MGP_NODShiLtJ_G0033873.1 mouse_genomes_project 8 119036781 119060146 - MGP_NODShiLtJ_P0089884 Slc12a4 protein_coding protein_coding MGP_NODShiLtJ_T0089885.1 MGP_NODShiLtJ_G0033873.1 mouse_genomes_project 8 119040707 119042190 - Slc12a4 protein_coding retained_intron MGP_NODShiLtJ_T0089886.1 MGP_NODShiLtJ_G0033873.1 mouse_genomes_project 8 119047906 119058451 - MGP_NODShiLtJ_P0089886 Slc12a4 protein_coding protein_coding MGP_NODShiLtJ_T0089887.1 MGP_NODShiLtJ_G0033873.1 mouse_genomes_project 8 119054488 119060105 - Slc12a4 protein_coding retained_intron MGP_NODShiLtJ_T0088803.1 MGP_NODShiLtJ_G0033511.1 mouse_genomes_project 8 78739568 78743050 - MGP_NODShiLtJ_P0088803 Tmem59l protein_coding protein_coding MGP_NODShiLtJ_T0090187.1 MGP_NODShiLtJ_G0033976.1 mouse_genomes_project 8 131466665 131517944 + MGP_NODShiLtJ_P0090187 Gan protein_coding protein_coding MGP_NODShiLtJ_T0089583.1 MGP_NODShiLtJ_G0033755.1 mouse_genomes_project 8 104467438 104488111 - MGP_NODShiLtJ_P0089583 Nudt21 protein_coding protein_coding MGP_NODShiLtJ_T0090425.1 MGP_NODShiLtJ_G0034042.1 mouse_genomes_project 8 137588422 137607576 + MGP_NODShiLtJ_P0090425 Cdh15 protein_coding protein_coding MGP_NODShiLtJ_T0015828.1 MGP_NODShiLtJ_G0013936.1 mouse_genomes_project 8 12632293 12632900 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089990.1 MGP_NODShiLtJ_G0033909.1 mouse_genomes_project 8 123029800 123047365 - MGP_NODShiLtJ_P0089990 Dhx38 protein_coding protein_coding MGP_NODShiLtJ_T0090303.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135745374 135762065 - MGP_NODShiLtJ_P0090303 Mthfsd protein_coding protein_coding MGP_NODShiLtJ_T0090304.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135748758 135754932 - Mthfsd protein_coding processed_transcript MGP_NODShiLtJ_T0090305.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135751299 135762074 - MGP_NODShiLtJ_P0090305 Mthfsd protein_coding protein_coding MGP_NODShiLtJ_T0090306.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135751301 135762042 - Mthfsd protein_coding processed_transcript MGP_NODShiLtJ_T0090307.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135751303 135762057 - MGP_NODShiLtJ_P0090307 Mthfsd protein_coding protein_coding MGP_NODShiLtJ_T0090308.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135751513 135755340 - Mthfsd protein_coding retained_intron MGP_NODShiLtJ_T0090309.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135751597 135762139 - MGP_NODShiLtJ_P0090309 Mthfsd protein_coding protein_coding MGP_NODShiLtJ_T0090310.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135751683 135762126 - Mthfsd protein_coding retained_intron MGP_NODShiLtJ_T0090311.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135752454 135762035 - Mthfsd protein_coding processed_transcript MGP_NODShiLtJ_T0090312.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135752754 135759379 - Mthfsd protein_coding processed_transcript MGP_NODShiLtJ_T0090313.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135754922 135762045 - MGP_NODShiLtJ_P0090313 Mthfsd protein_coding protein_coding MGP_NODShiLtJ_T0090314.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135756469 135761390 - Mthfsd protein_coding retained_intron MGP_NODShiLtJ_T0090315.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135757598 135759436 - Mthfsd protein_coding processed_transcript MGP_NODShiLtJ_T0090316.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135757845 135762060 - Mthfsd protein_coding processed_transcript MGP_NODShiLtJ_T0090317.1 MGP_NODShiLtJ_G0034012.1 mouse_genomes_project 8 135758221 135762090 - Mthfsd protein_coding processed_transcript MGP_NODShiLtJ_T0010903.1 MGP_NODShiLtJ_G0009036.1 mouse_genomes_project 8 122357010 122357089 + Mir3108 miRNA miRNA MGP_NODShiLtJ_T0009106.1 MGP_NODShiLtJ_G0007310.1 mouse_genomes_project 8 135646037 135646301 + Gm28324 lincRNA lincRNA MGP_NODShiLtJ_T0087620.1 MGP_NODShiLtJ_G0033127.1 mouse_genomes_project 8 922033 931202 - MGP_NODShiLtJ_P0087620 Cd209b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087621.1 MGP_NODShiLtJ_G0033127.1 mouse_genomes_project 8 922035 931191 - MGP_NODShiLtJ_P0087621 Cd209b protein_coding protein_coding MGP_NODShiLtJ_T0087622.1 MGP_NODShiLtJ_G0033127.1 mouse_genomes_project 8 922984 931191 - MGP_NODShiLtJ_P0087622 Cd209b protein_coding protein_coding MGP_NODShiLtJ_T0087623.1 MGP_NODShiLtJ_G0033127.1 mouse_genomes_project 8 923055 931171 - MGP_NODShiLtJ_P0087623 Cd209b protein_coding protein_coding MGP_NODShiLtJ_T0087955.1 MGP_NODShiLtJ_G0033251.1 mouse_genomes_project 8 21187241 21245107 - MGP_NODShiLtJ_P0087955 Nek5 protein_coding protein_coding MGP_NODShiLtJ_T0087956.1 MGP_NODShiLtJ_G0033251.1 mouse_genomes_project 8 21187256 21245089 - MGP_NODShiLtJ_P0087956 Nek5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100793.1 MGP_NODShiLtJ_G0039187.1 mouse_genomes_project 8 13803026 13803159 - Gm24231 snoRNA snoRNA MGP_NODShiLtJ_T0088911.1 MGP_NODShiLtJ_G0033551.1 mouse_genomes_project 8 79702805 79710589 - Nr2f6 protein_coding processed_transcript MGP_NODShiLtJ_T0088912.1 MGP_NODShiLtJ_G0033551.1 mouse_genomes_project 8 79702809 79710643 - MGP_NODShiLtJ_P0088912 Nr2f6 protein_coding protein_coding MGP_NODShiLtJ_T0088913.1 MGP_NODShiLtJ_G0033551.1 mouse_genomes_project 8 79703310 79704473 - Nr2f6 protein_coding processed_transcript MGP_NODShiLtJ_T0088914.1 MGP_NODShiLtJ_G0033551.1 mouse_genomes_project 8 79703335 79704473 - Nr2f6 protein_coding processed_transcript MGP_NODShiLtJ_T0088915.1 MGP_NODShiLtJ_G0033551.1 mouse_genomes_project 8 79703800 79704473 - Nr2f6 protein_coding processed_transcript MGP_NODShiLtJ_T0088916.1 MGP_NODShiLtJ_G0033551.1 mouse_genomes_project 8 79704434 79709592 - Nr2f6 protein_coding processed_transcript MGP_NODShiLtJ_T0088917.1 MGP_NODShiLtJ_G0033551.1 mouse_genomes_project 8 79704434 79709773 - MGP_NODShiLtJ_P0088917 Nr2f6 protein_coding protein_coding MGP_NODShiLtJ_T0088918.1 MGP_NODShiLtJ_G0033551.1 mouse_genomes_project 8 79704501 79709860 - MGP_NODShiLtJ_P0088918 Nr2f6 protein_coding protein_coding MGP_NODShiLtJ_T0089914.1 MGP_NODShiLtJ_G0033882.1 mouse_genomes_project 8 119329605 119340803 - MGP_NODShiLtJ_P0089914 Slc7a6os protein_coding protein_coding MGP_NODShiLtJ_T0087938.1 MGP_NODShiLtJ_G0033239.1 mouse_genomes_project 8 20917332 20923825 + MGP_NODShiLtJ_P0087938 Defb50 protein_coding protein_coding MGP_NODShiLtJ_T0099578.1 MGP_NODShiLtJ_G0037972.1 mouse_genomes_project 8 137724134 137724241 - Gm24445 snRNA snRNA MGP_NODShiLtJ_T0009077.1 MGP_NODShiLtJ_G0007289.1 mouse_genomes_project 8 102692434 102695140 - Gm21817 lincRNA lincRNA MGP_NODShiLtJ_T0002281.1 MGP_NODShiLtJ_G0002192.1 mouse_genomes_project 8 22417200 22418051 + TEC TEC MGP_NODShiLtJ_T0087848.1 MGP_NODShiLtJ_G0033198.1 mouse_genomes_project 8 12438672 12460771 - MGP_NODShiLtJ_P0087848 Tdrp protein_coding protein_coding MGP_NODShiLtJ_T0087849.1 MGP_NODShiLtJ_G0033198.1 mouse_genomes_project 8 12438793 12440051 - Tdrp protein_coding processed_transcript MGP_NODShiLtJ_T0087850.1 MGP_NODShiLtJ_G0033198.1 mouse_genomes_project 8 12440419 12448473 - Tdrp protein_coding processed_transcript MGP_NODShiLtJ_T0087851.1 MGP_NODShiLtJ_G0033198.1 mouse_genomes_project 8 12440776 12461026 - MGP_NODShiLtJ_P0087851 Tdrp protein_coding protein_coding MGP_NODShiLtJ_T0087852.1 MGP_NODShiLtJ_G0033198.1 mouse_genomes_project 8 12458609 12460737 - Tdrp protein_coding retained_intron MGP_NODShiLtJ_T0088185.1 MGP_NODShiLtJ_G0033333.1 mouse_genomes_project 8 34271407 34321849 + MGP_NODShiLtJ_P0088185 Gtf2e2 protein_coding protein_coding MGP_NODShiLtJ_T0088186.1 MGP_NODShiLtJ_G0033333.1 mouse_genomes_project 8 34271616 34321849 + MGP_NODShiLtJ_P0088186 Gtf2e2 protein_coding protein_coding MGP_NODShiLtJ_T0088187.1 MGP_NODShiLtJ_G0033333.1 mouse_genomes_project 8 34271707 34294594 + MGP_NODShiLtJ_P0088187 Gtf2e2 protein_coding protein_coding MGP_NODShiLtJ_T0088188.1 MGP_NODShiLtJ_G0033333.1 mouse_genomes_project 8 34271885 34276768 + MGP_NODShiLtJ_P0088188 Gtf2e2 protein_coding protein_coding MGP_NODShiLtJ_T0088189.1 MGP_NODShiLtJ_G0033333.1 mouse_genomes_project 8 34271913 34321858 + MGP_NODShiLtJ_P0088189 Gtf2e2 protein_coding protein_coding MGP_NODShiLtJ_T0088190.1 MGP_NODShiLtJ_G0033333.1 mouse_genomes_project 8 34273018 34302468 + MGP_NODShiLtJ_P0088190 Gtf2e2 protein_coding protein_coding MGP_NODShiLtJ_T0088192.1 MGP_NODShiLtJ_G0033333.1 mouse_genomes_project 8 34308860 34321463 + Gtf2e2 protein_coding processed_transcript MGP_NODShiLtJ_T0015857.1 MGP_NODShiLtJ_G0013965.1 mouse_genomes_project 8 56460245 56461211 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087668.1 MGP_NODShiLtJ_G0033137.1 mouse_genomes_project 8 1329786 1370104 - MGP_NODShiLtJ_P0087668 Elavl1 protein_coding protein_coding MGP_NODShiLtJ_T0015871.1 MGP_NODShiLtJ_G0013979.1 mouse_genomes_project 8 88973350 88974293 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087929.1 MGP_NODShiLtJ_G0033230.1 mouse_genomes_project 8 19976386 19981840 - MGP_NODShiLtJ_P0087929 Gm6040 protein_coding protein_coding MGP_NODShiLtJ_T0010907.1 MGP_NODShiLtJ_G0009040.1 mouse_genomes_project 8 124661887 124661964 - Gm24103 miRNA miRNA MGP_NODShiLtJ_T0090566.1 MGP_NODShiLtJ_G0034083.1 mouse_genomes_project 8 139799715 139816824 - MGP_NODShiLtJ_P0090566 2810004N23Rik protein_coding protein_coding MGP_NODShiLtJ_T0005265.1 MGP_NODShiLtJ_G0004460.1 mouse_genomes_project 8 656987 658136 - antisense antisense MGP_NODShiLtJ_T0090067.1 MGP_NODShiLtJ_G0033936.1 mouse_genomes_project 8 124611665 124645937 - MGP_NODShiLtJ_P0090067 Ddx19b protein_coding protein_coding MGP_NODShiLtJ_T0090068.1 MGP_NODShiLtJ_G0033936.1 mouse_genomes_project 8 124615142 124650920 - MGP_NODShiLtJ_P0090068 Ddx19b protein_coding protein_coding MGP_NODShiLtJ_T0089854.1 MGP_NODShiLtJ_G0033856.1 mouse_genomes_project 8 118746945 118754323 + MGP_NODShiLtJ_P0089854 Rltpr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089855.1 MGP_NODShiLtJ_G0033856.1 mouse_genomes_project 8 118751581 118758854 + MGP_NODShiLtJ_P0089855 Rltpr protein_coding protein_coding MGP_NODShiLtJ_T0089856.1 MGP_NODShiLtJ_G0033856.1 mouse_genomes_project 8 118754823 118758879 + MGP_NODShiLtJ_P0089856 Rltpr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089775.1 MGP_NODShiLtJ_G0033827.1 mouse_genomes_project 8 117981611 117994954 + MGP_NODShiLtJ_P0089775 Ces2h protein_coding protein_coding MGP_NODShiLtJ_T0089212.1 MGP_NODShiLtJ_G0033648.1 mouse_genomes_project 8 93689793 93705939 + MGP_NODShiLtJ_P0089212 Asf1b protein_coding protein_coding MGP_NODShiLtJ_T0089213.1 MGP_NODShiLtJ_G0033648.1 mouse_genomes_project 8 93690000 93703587 + Asf1b protein_coding processed_transcript MGP_NODShiLtJ_T0089214.1 MGP_NODShiLtJ_G0033648.1 mouse_genomes_project 8 93700788 93704285 + Asf1b protein_coding retained_intron MGP_NODShiLtJ_T0100802.1 MGP_NODShiLtJ_G0039196.1 mouse_genomes_project 8 25045377 25045508 - Gm23184 snoRNA snoRNA MGP_NODShiLtJ_T0088020.1 MGP_NODShiLtJ_G0033274.1 mouse_genomes_project 8 22889417 23187728 + MGP_NODShiLtJ_P0088020 Zmat4 protein_coding protein_coding MGP_NODShiLtJ_T0088021.1 MGP_NODShiLtJ_G0033274.1 mouse_genomes_project 8 22923813 23466823 + MGP_NODShiLtJ_P0088021 Zmat4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088022.1 MGP_NODShiLtJ_G0033274.1 mouse_genomes_project 8 22923813 23364845 + MGP_NODShiLtJ_P0088022 Zmat4 protein_coding protein_coding MGP_NODShiLtJ_T0088023.1 MGP_NODShiLtJ_G0033274.1 mouse_genomes_project 8 22956650 23080850 + MGP_NODShiLtJ_P0088023 Zmat4 protein_coding protein_coding MGP_NODShiLtJ_T0088024.1 MGP_NODShiLtJ_G0033274.1 mouse_genomes_project 8 23218032 23310591 + Zmat4 protein_coding retained_intron MGP_NODShiLtJ_T0088317.1 MGP_NODShiLtJ_G0033374.1 mouse_genomes_project 8 45988260 45997961 - MGP_NODShiLtJ_P0088317 Adam26a protein_coding protein_coding MGP_NODShiLtJ_T0098091.1 MGP_NODShiLtJ_G0036503.1 mouse_genomes_project 8 14023176 14023269 + Gm24222 rRNA rRNA MGP_NODShiLtJ_T0087553.1 MGP_NODShiLtJ_G0033107.1 mouse_genomes_project 8 297475 406210 + MGP_NODShiLtJ_P0087553 Arhgef18 protein_coding protein_coding MGP_NODShiLtJ_T0087554.1 MGP_NODShiLtJ_G0033107.1 mouse_genomes_project 8 340071 400240 + Arhgef18 protein_coding retained_intron MGP_NODShiLtJ_T0087555.1 MGP_NODShiLtJ_G0033107.1 mouse_genomes_project 8 340138 379104 + Arhgef18 protein_coding processed_transcript MGP_NODShiLtJ_T0087556.1 MGP_NODShiLtJ_G0033107.1 mouse_genomes_project 8 340138 379472 + MGP_NODShiLtJ_P0087556 Arhgef18 protein_coding protein_coding MGP_NODShiLtJ_T0087557.1 MGP_NODShiLtJ_G0033107.1 mouse_genomes_project 8 386843 406200 + Arhgef18 protein_coding retained_intron MGP_NODShiLtJ_T0087558.1 MGP_NODShiLtJ_G0033107.1 mouse_genomes_project 8 400357 403868 + Arhgef18 protein_coding retained_intron MGP_NODShiLtJ_T0088591.1 MGP_NODShiLtJ_G0033452.1 mouse_genomes_project 8 72496385 72518086 - MGP_NODShiLtJ_P0088591 Trim60 protein_coding protein_coding MGP_NODShiLtJ_T0098455.1 MGP_NODShiLtJ_G0036855.1 mouse_genomes_project 8 34440619 34441586 - Gm26978 sense_intronic sense_intronic MGP_NODShiLtJ_T0010912.1 MGP_NODShiLtJ_G0009045.1 mouse_genomes_project 8 131806668 131806732 + Mir7078 miRNA miRNA MGP_NODShiLtJ_T0100835.1 MGP_NODShiLtJ_G0039229.1 mouse_genomes_project 8 99814356 99814488 - Gm24212 snoRNA snoRNA MGP_NODShiLtJ_T0089597.1 MGP_NODShiLtJ_G0033761.1 mouse_genomes_project 8 104665610 104666847 + MGP_NODShiLtJ_P0089597 Mt1 protein_coding protein_coding MGP_NODShiLtJ_T0010866.1 MGP_NODShiLtJ_G0008999.1 mouse_genomes_project 8 79975840 79975900 - Mir6769b miRNA miRNA MGP_NODShiLtJ_T0089861.1 MGP_NODShiLtJ_G0033860.1 mouse_genomes_project 8 118770773 118772727 + MGP_NODShiLtJ_P0089861 4933405L10Rik protein_coding protein_coding MGP_NODShiLtJ_T0015892.1 MGP_NODShiLtJ_G0014000.1 mouse_genomes_project 8 118720115 118721339 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002293.1 MGP_NODShiLtJ_G0002203.1 mouse_genomes_project 8 135143596 135144431 - TEC TEC MGP_NODShiLtJ_T0090058.1 MGP_NODShiLtJ_G0033933.1 mouse_genomes_project 8 124470389 124494100 - MGP_NODShiLtJ_P0090058 Fuk protein_coding protein_coding MGP_NODShiLtJ_T0098458.1 MGP_NODShiLtJ_G0036858.1 mouse_genomes_project 8 134670003 134672680 + Gm15898 sense_intronic sense_intronic MGP_NODShiLtJ_T0009031.1 MGP_NODShiLtJ_G0007258.1 mouse_genomes_project 8 80563882 80567293 - Gm26586 lincRNA lincRNA MGP_NODShiLtJ_T0089139.1 MGP_NODShiLtJ_G0033625.1 mouse_genomes_project 8 90113777 90238446 - MGP_NODShiLtJ_P0089139 Gab1 protein_coding protein_coding MGP_NODShiLtJ_T0099573.1 MGP_NODShiLtJ_G0037967.1 mouse_genomes_project 8 127470979 127471141 - Gm24291 snRNA snRNA MGP_NODShiLtJ_T0090562.1 MGP_NODShiLtJ_G0034080.1 mouse_genomes_project 8 139660612 139673956 + MGP_NODShiLtJ_P0090562 Arv1 protein_coding protein_coding MGP_NODShiLtJ_T0011613.1 MGP_NODShiLtJ_G0009746.1 mouse_genomes_project 8 101492090 101492355 - Gm23408 misc_RNA misc_RNA MGP_NODShiLtJ_T0089987.1 MGP_NODShiLtJ_G0033907.1 mouse_genomes_project 8 122110687 122213016 + MGP_NODShiLtJ_P0089987 protein_coding protein_coding MGP_NODShiLtJ_T0089988.1 MGP_NODShiLtJ_G0033907.1 mouse_genomes_project 8 122202176 122382336 + MGP_NODShiLtJ_P0089988 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090375.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137080780 137121903 + MGP_NODShiLtJ_P0090375 Zc3h18 protein_coding protein_coding MGP_NODShiLtJ_T0090376.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137080814 137121904 + MGP_NODShiLtJ_P0090376 Zc3h18 protein_coding protein_coding MGP_NODShiLtJ_T0090377.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137080815 137087903 + MGP_NODShiLtJ_P0090377 Zc3h18 protein_coding protein_coding MGP_NODShiLtJ_T0090378.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137080819 137093921 + Zc3h18 protein_coding retained_intron MGP_NODShiLtJ_T0090379.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137080852 137121903 + MGP_NODShiLtJ_P0090379 Zc3h18 protein_coding protein_coding MGP_NODShiLtJ_T0090380.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137107407 137110269 + Zc3h18 protein_coding processed_transcript MGP_NODShiLtJ_T0090381.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137107477 137115545 + MGP_NODShiLtJ_P0090381 Zc3h18 protein_coding protein_coding MGP_NODShiLtJ_T0090382.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137111984 137121903 + Zc3h18 protein_coding retained_intron MGP_NODShiLtJ_T0090383.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137112159 137115046 + Zc3h18 protein_coding retained_intron MGP_NODShiLtJ_T0090384.1 MGP_NODShiLtJ_G0034026.1 mouse_genomes_project 8 137115466 137120390 + MGP_NODShiLtJ_P0090384 Zc3h18 protein_coding protein_coding MGP_NODShiLtJ_T0089456.1 MGP_NODShiLtJ_G0033715.1 mouse_genomes_project 8 96697719 96698624 + MGP_NODShiLtJ_P0089456 Gm10638 protein_coding protein_coding MGP_NODShiLtJ_T0087965.1 MGP_NODShiLtJ_G0033255.1 mouse_genomes_project 8 21355202 21392385 + MGP_NODShiLtJ_P0087965 Thsd1 protein_coding protein_coding MGP_NODShiLtJ_T0087966.1 MGP_NODShiLtJ_G0033255.1 mouse_genomes_project 8 21355234 21391431 + MGP_NODShiLtJ_P0087966 Thsd1 protein_coding protein_coding MGP_NODShiLtJ_T0087967.1 MGP_NODShiLtJ_G0033255.1 mouse_genomes_project 8 21355251 21391429 + Thsd1 protein_coding processed_transcript MGP_NODShiLtJ_T0089133.1 MGP_NODShiLtJ_G0033623.1 mouse_genomes_project 8 89950061 90028281 + MGP_NODShiLtJ_P0089133 Frem3 protein_coding protein_coding MGP_NODShiLtJ_T0088386.1 MGP_NODShiLtJ_G0033390.1 mouse_genomes_project 8 48792231 48919320 - MGP_NODShiLtJ_P0088386 Snx25 protein_coding protein_coding MGP_NODShiLtJ_T0088387.1 MGP_NODShiLtJ_G0033390.1 mouse_genomes_project 8 48792246 48885423 - Snx25 protein_coding retained_intron MGP_NODShiLtJ_T0088388.1 MGP_NODShiLtJ_G0033390.1 mouse_genomes_project 8 48792427 48845617 - MGP_NODShiLtJ_P0088388 Snx25 protein_coding protein_coding MGP_NODShiLtJ_T0088389.1 MGP_NODShiLtJ_G0033390.1 mouse_genomes_project 8 48810281 48817330 - Snx25 protein_coding processed_transcript MGP_NODShiLtJ_T0088390.1 MGP_NODShiLtJ_G0033390.1 mouse_genomes_project 8 48816953 48892818 - MGP_NODShiLtJ_P0088390 Snx25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088391.1 MGP_NODShiLtJ_G0033390.1 mouse_genomes_project 8 48816997 48855025 - Snx25 protein_coding processed_transcript MGP_NODShiLtJ_T0088392.1 MGP_NODShiLtJ_G0033390.1 mouse_genomes_project 8 48845174 48874021 - Snx25 protein_coding retained_intron MGP_NODShiLtJ_T0089946.1 MGP_NODShiLtJ_G0033897.1 mouse_genomes_project 8 120246046 120256398 - MGP_NODShiLtJ_P0089946 Cog8 protein_coding protein_coding MGP_NODShiLtJ_T0089947.1 MGP_NODShiLtJ_G0033897.1 mouse_genomes_project 8 120246052 120256393 - MGP_NODShiLtJ_P0089947 Cog8 protein_coding protein_coding MGP_NODShiLtJ_T0089949.1 MGP_NODShiLtJ_G0033897.1 mouse_genomes_project 8 120252390 120253970 - Cog8 protein_coding retained_intron MGP_NODShiLtJ_T0089950.1 MGP_NODShiLtJ_G0033897.1 mouse_genomes_project 8 120252620 120256207 - MGP_NODShiLtJ_P0089950 Cog8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088337.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48207110 48503424 + Sorbs2 protein_coding retained_intron MGP_NODShiLtJ_T0088338.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48207114 48522499 + MGP_NODShiLtJ_P0088338 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088339.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48207134 48501955 + MGP_NODShiLtJ_P0088339 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088340.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48341014 48468943 + MGP_NODShiLtJ_P0088340 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088341.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48341072 48555893 + MGP_NODShiLtJ_P0088341 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088342.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48341241 48468965 + MGP_NODShiLtJ_P0088342 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088343.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48341454 48364385 + Sorbs2 protein_coding processed_transcript MGP_NODShiLtJ_T0088344.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48341470 48469768 + MGP_NODShiLtJ_P0088344 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088345.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48373324 48548695 + MGP_NODShiLtJ_P0088345 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088346.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48373702 48501955 + MGP_NODShiLtJ_P0088346 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088347.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48373728 48468802 + Sorbs2 protein_coding retained_intron MGP_NODShiLtJ_T0088348.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48373741 48469725 + MGP_NODShiLtJ_P0088348 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088349.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48373816 48465555 + Sorbs2 protein_coding retained_intron MGP_NODShiLtJ_T0088350.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48373836 48497734 + MGP_NODShiLtJ_P0088350 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088351.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48377025 48482805 + MGP_NODShiLtJ_P0088351 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088352.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48377028 48555612 + MGP_NODShiLtJ_P0088352 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088353.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48407771 48482854 + MGP_NODShiLtJ_P0088353 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088354.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48407775 48482814 + MGP_NODShiLtJ_P0088354 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088355.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48454606 48555932 + MGP_NODShiLtJ_P0088355 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088356.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48488188 48555924 + MGP_NODShiLtJ_P0088356 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088357.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48488926 48527764 + Sorbs2 protein_coding processed_transcript MGP_NODShiLtJ_T0088358.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48494919 48519970 + MGP_NODShiLtJ_P0088358 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088359.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48495635 48519938 + MGP_NODShiLtJ_P0088359 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088360.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48497434 48500974 + Sorbs2 protein_coding retained_intron MGP_NODShiLtJ_T0088361.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48500749 48522173 + MGP_NODShiLtJ_P0088361 Sorbs2 protein_coding protein_coding MGP_NODShiLtJ_T0088362.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48531020 48531721 + Sorbs2 protein_coding retained_intron MGP_NODShiLtJ_T0088363.1 MGP_NODShiLtJ_G0033383.1 mouse_genomes_project 8 48533605 48535071 + Sorbs2 protein_coding processed_transcript MGP_NODShiLtJ_T0088871.1 MGP_NODShiLtJ_G0033537.1 mouse_genomes_project 8 79151332 79157587 - MGP_NODShiLtJ_P0088871 Ccdc124 protein_coding protein_coding MGP_NODShiLtJ_T0090302.1 MGP_NODShiLtJ_G0034011.1 mouse_genomes_project 8 135738132 135741891 + MGP_NODShiLtJ_P0090302 Foxf1 protein_coding protein_coding MGP_NODShiLtJ_T0087702.1 MGP_NODShiLtJ_G0033152.1 mouse_genomes_project 8 8402018 8807705 + MGP_NODShiLtJ_P0087702 Myo16 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087703.1 MGP_NODShiLtJ_G0033152.1 mouse_genomes_project 8 8427545 8807696 + MGP_NODShiLtJ_P0087703 Myo16 protein_coding protein_coding MGP_NODShiLtJ_T0088615.1 MGP_NODShiLtJ_G0033460.1 mouse_genomes_project 8 74653043 74685129 + MGP_NODShiLtJ_P0088615 Naf1 protein_coding protein_coding MGP_NODShiLtJ_T0087573.1 MGP_NODShiLtJ_G0033112.1 mouse_genomes_project 8 473685 503433 + MGP_NODShiLtJ_P0087573 Pnpla6 protein_coding protein_coding MGP_NODShiLtJ_T0087574.1 MGP_NODShiLtJ_G0033112.1 mouse_genomes_project 8 473685 503433 + MGP_NODShiLtJ_P0087574 Pnpla6 protein_coding protein_coding MGP_NODShiLtJ_T0090030.1 MGP_NODShiLtJ_G0033927.1 mouse_genomes_project 8 123825727 124185185 + MGP_NODShiLtJ_P0090030 Hydin protein_coding protein_coding MGP_NODShiLtJ_T0090031.1 MGP_NODShiLtJ_G0033927.1 mouse_genomes_project 8 123825733 124184989 + MGP_NODShiLtJ_P0090031 Hydin protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089483.1 MGP_NODShiLtJ_G0033723.1 mouse_genomes_project 8 98322182 98383259 + MGP_NODShiLtJ_P0089483 Adcy7 protein_coding protein_coding MGP_NODShiLtJ_T0089484.1 MGP_NODShiLtJ_G0033723.1 mouse_genomes_project 8 98332569 98383259 + MGP_NODShiLtJ_P0089484 Adcy7 protein_coding protein_coding MGP_NODShiLtJ_T0089485.1 MGP_NODShiLtJ_G0033723.1 mouse_genomes_project 8 98338666 98383259 + MGP_NODShiLtJ_P0089485 Adcy7 protein_coding protein_coding MGP_NODShiLtJ_T0089486.1 MGP_NODShiLtJ_G0033723.1 mouse_genomes_project 8 98343800 98383259 + MGP_NODShiLtJ_P0089486 Adcy7 protein_coding protein_coding MGP_NODShiLtJ_T0087807.1 MGP_NODShiLtJ_G0033179.1 mouse_genomes_project 8 11657492 11690075 - MGP_NODShiLtJ_P0087807 Dcun1d2 protein_coding protein_coding MGP_NODShiLtJ_T0087808.1 MGP_NODShiLtJ_G0033179.1 mouse_genomes_project 8 11657493 11689780 - MGP_NODShiLtJ_P0087808 Dcun1d2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087809.1 MGP_NODShiLtJ_G0033179.1 mouse_genomes_project 8 11657494 11690074 - Dcun1d2 protein_coding processed_transcript MGP_NODShiLtJ_T0087810.1 MGP_NODShiLtJ_G0033179.1 mouse_genomes_project 8 11659426 11689756 - MGP_NODShiLtJ_P0087810 Dcun1d2 protein_coding protein_coding MGP_NODShiLtJ_T0087811.1 MGP_NODShiLtJ_G0033179.1 mouse_genomes_project 8 11661432 11689783 - MGP_NODShiLtJ_P0087811 Dcun1d2 protein_coding protein_coding MGP_NODShiLtJ_T0087812.1 MGP_NODShiLtJ_G0033179.1 mouse_genomes_project 8 11680332 11683396 - Dcun1d2 protein_coding retained_intron MGP_NODShiLtJ_T0010898.1 MGP_NODShiLtJ_G0009031.1 mouse_genomes_project 8 118337759 118337856 - Mir328 miRNA miRNA MGP_NODShiLtJ_T0089232.1 MGP_NODShiLtJ_G0033657.1 mouse_genomes_project 8 93808287 93810346 - MGP_NODShiLtJ_P0089232 protein_coding protein_coding MGP_NODShiLtJ_T0088928.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800922 79803970 + Dda1 protein_coding processed_transcript MGP_NODShiLtJ_T0088929.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800922 79807824 + Dda1 protein_coding processed_transcript MGP_NODShiLtJ_T0088930.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800922 79804099 + Dda1 protein_coding retained_intron MGP_NODShiLtJ_T0088931.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800922 79807824 + Dda1 protein_coding processed_transcript MGP_NODShiLtJ_T0088932.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800922 79807824 + MGP_NODShiLtJ_P0088932 Dda1 protein_coding protein_coding MGP_NODShiLtJ_T0088933.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800922 79807824 + MGP_NODShiLtJ_P0088933 Dda1 protein_coding protein_coding MGP_NODShiLtJ_T0088934.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800928 79807824 + MGP_NODShiLtJ_P0088934 Dda1 protein_coding protein_coding MGP_NODShiLtJ_T0088935.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800934 79804506 + Dda1 protein_coding retained_intron MGP_NODShiLtJ_T0088936.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79800934 79806700 + Dda1 protein_coding retained_intron MGP_NODShiLtJ_T0088937.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79801008 79804339 + Dda1 protein_coding retained_intron MGP_NODShiLtJ_T0088938.1 MGP_NODShiLtJ_G0033557.1 mouse_genomes_project 8 79802134 79807824 + Dda1 protein_coding processed_transcript MGP_NODShiLtJ_T0088142.1 MGP_NODShiLtJ_G0033309.1 mouse_genomes_project 8 26769332 26774189 - MGP_NODShiLtJ_P0088142 Brf2 protein_coding protein_coding MGP_NODShiLtJ_T0009092.1 MGP_NODShiLtJ_G0007298.1 mouse_genomes_project 8 119370504 119565018 - Gm26786 lincRNA lincRNA MGP_NODShiLtJ_T0088393.1 MGP_NODShiLtJ_G0033391.1 mouse_genomes_project 8 48930738 48965356 + MGP_NODShiLtJ_P0088393 Cfap97 protein_coding protein_coding MGP_NODShiLtJ_T0088394.1 MGP_NODShiLtJ_G0033391.1 mouse_genomes_project 8 48930779 48940171 + Cfap97 protein_coding processed_transcript MGP_NODShiLtJ_T0088395.1 MGP_NODShiLtJ_G0033391.1 mouse_genomes_project 8 48930802 48940077 + MGP_NODShiLtJ_P0088395 Cfap97 protein_coding protein_coding MGP_NODShiLtJ_T0088396.1 MGP_NODShiLtJ_G0033391.1 mouse_genomes_project 8 48930822 48965352 + MGP_NODShiLtJ_P0088396 Cfap97 protein_coding protein_coding MGP_NODShiLtJ_T0088397.1 MGP_NODShiLtJ_G0033391.1 mouse_genomes_project 8 48938931 48965354 + MGP_NODShiLtJ_P0088397 Cfap97 protein_coding protein_coding MGP_NODShiLtJ_T0089895.1 MGP_NODShiLtJ_G0033877.1 mouse_genomes_project 8 119106913 119109175 - MGP_NODShiLtJ_P0089895 Ddx28 protein_coding protein_coding MGP_NODShiLtJ_T0099569.1 MGP_NODShiLtJ_G0037963.1 mouse_genomes_project 8 123350064 123350166 - Gm25321 snRNA snRNA MGP_NODShiLtJ_T0015882.1 MGP_NODShiLtJ_G0013990.1 mouse_genomes_project 8 99259123 99259448 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005340.1 MGP_NODShiLtJ_G0004521.1 mouse_genomes_project 8 134606336 134615536 - Gm15684 antisense antisense MGP_NODShiLtJ_T0088824.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78783190 78790507 + MGP_NODShiLtJ_P0088824 Fkbp8 protein_coding protein_coding MGP_NODShiLtJ_T0088825.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78783213 78790505 + MGP_NODShiLtJ_P0088825 Fkbp8 protein_coding protein_coding MGP_NODShiLtJ_T0088826.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78783228 78787913 + Fkbp8 protein_coding retained_intron MGP_NODShiLtJ_T0088827.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78783312 78790506 + MGP_NODShiLtJ_P0088827 Fkbp8 protein_coding protein_coding MGP_NODShiLtJ_T0088828.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78783475 78786058 + Fkbp8 protein_coding retained_intron MGP_NODShiLtJ_T0088829.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78784282 78785043 + MGP_NODShiLtJ_P0088829 Fkbp8 protein_coding protein_coding MGP_NODShiLtJ_T0088830.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78786583 78789350 + Fkbp8 protein_coding retained_intron MGP_NODShiLtJ_T0088831.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78787193 78790135 + Fkbp8 protein_coding retained_intron MGP_NODShiLtJ_T0088832.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78787580 78790150 + Fkbp8 protein_coding retained_intron MGP_NODShiLtJ_T0088833.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78787643 78790046 + Fkbp8 protein_coding retained_intron MGP_NODShiLtJ_T0088834.1 MGP_NODShiLtJ_G0033516.1 mouse_genomes_project 8 78789295 78790236 + MGP_NODShiLtJ_P0088834 Fkbp8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089941.1 MGP_NODShiLtJ_G0033894.1 mouse_genomes_project 8 120231010 120245519 + MGP_NODShiLtJ_P0089941 Vps4a protein_coding protein_coding MGP_NODShiLtJ_T0089943.1 MGP_NODShiLtJ_G0033894.1 mouse_genomes_project 8 120238777 120242445 + Vps4a protein_coding retained_intron MGP_NODShiLtJ_T0089944.1 MGP_NODShiLtJ_G0033894.1 mouse_genomes_project 8 120242012 120242864 + Vps4a protein_coding retained_intron MGP_NODShiLtJ_T0005273.1 MGP_NODShiLtJ_G0004467.1 mouse_genomes_project 8 11261126 11264786 - Gm15353 antisense antisense MGP_NODShiLtJ_T0005274.1 MGP_NODShiLtJ_G0004467.1 mouse_genomes_project 8 11261270 11264776 - Gm15353 antisense antisense MGP_NODShiLtJ_T0010874.1 MGP_NODShiLtJ_G0009007.1 mouse_genomes_project 8 93751951 93752070 - Mir1199 miRNA miRNA MGP_NODShiLtJ_T0088149.1 MGP_NODShiLtJ_G0033313.1 mouse_genomes_project 8 26919451 26934947 + MGP_NODShiLtJ_P0088149 Eif4ebp1 protein_coding protein_coding MGP_NODShiLtJ_T0018294.1 MGP_NODShiLtJ_G0015578.1 mouse_genomes_project 8 47694018 47701225 - AY512931 processed_transcript processed_transcript MGP_NODShiLtJ_T0009052.1 MGP_NODShiLtJ_G0007276.1 mouse_genomes_project 8 97339670 97358215 - Gm27207 lincRNA lincRNA MGP_NODShiLtJ_T0099567.1 MGP_NODShiLtJ_G0037961.1 mouse_genomes_project 8 118188650 118188754 + Gm22063 snRNA snRNA MGP_NODShiLtJ_T0099570.1 MGP_NODShiLtJ_G0037964.1 mouse_genomes_project 8 123992189 123992296 - Gm23627 snRNA snRNA MGP_NODShiLtJ_T0087817.1 MGP_NODShiLtJ_G0033183.1 mouse_genomes_project 8 11819936 11840066 + MGP_NODShiLtJ_P0087817 Grk1 protein_coding protein_coding MGP_NODShiLtJ_T0098096.1 MGP_NODShiLtJ_G0036508.1 mouse_genomes_project 8 59938725 59938844 + n-R5s98 rRNA rRNA MGP_NODShiLtJ_T0089868.1 MGP_NODShiLtJ_G0033865.1 mouse_genomes_project 8 118944870 118946718 + MGP_NODShiLtJ_P0089868 Thap11 protein_coding protein_coding MGP_NODShiLtJ_T0097833.1 MGP_NODShiLtJ_G0036245.1 mouse_genomes_project 8 25029641 25030632 + pseudogene pseudogene MGP_NODShiLtJ_T0009107.1 MGP_NODShiLtJ_G0007311.1 mouse_genomes_project 8 135703258 135736823 - Fendrr lincRNA lincRNA MGP_NODShiLtJ_T0009108.1 MGP_NODShiLtJ_G0007311.1 mouse_genomes_project 8 135707179 135708790 - Fendrr lincRNA lincRNA MGP_NODShiLtJ_T0009109.1 MGP_NODShiLtJ_G0007311.1 mouse_genomes_project 8 135707495 135736901 - Fendrr lincRNA lincRNA MGP_NODShiLtJ_T0090059.1 MGP_NODShiLtJ_G0033934.1 mouse_genomes_project 8 124514983 124575126 + MGP_NODShiLtJ_P0090059 St3gal2 protein_coding protein_coding MGP_NODShiLtJ_T0090060.1 MGP_NODShiLtJ_G0033934.1 mouse_genomes_project 8 124514983 124572469 + MGP_NODShiLtJ_P0090060 St3gal2 protein_coding protein_coding MGP_NODShiLtJ_T0090061.1 MGP_NODShiLtJ_G0033934.1 mouse_genomes_project 8 124515019 124557915 + St3gal2 protein_coding processed_transcript MGP_NODShiLtJ_T0090062.1 MGP_NODShiLtJ_G0033934.1 mouse_genomes_project 8 124530754 124558114 + St3gal2 protein_coding processed_transcript MGP_NODShiLtJ_T0090063.1 MGP_NODShiLtJ_G0033934.1 mouse_genomes_project 8 124539734 124557940 + St3gal2 protein_coding processed_transcript MGP_NODShiLtJ_T0088793.1 MGP_NODShiLtJ_G0033507.1 mouse_genomes_project 8 78562659 78586527 - MGP_NODShiLtJ_P0088793 Upf1 protein_coding protein_coding MGP_NODShiLtJ_T0088794.1 MGP_NODShiLtJ_G0033507.1 mouse_genomes_project 8 78563546 78586247 - MGP_NODShiLtJ_P0088794 Upf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088577.1 MGP_NODShiLtJ_G0033445.1 mouse_genomes_project 8 71258932 71289498 - MGP_NODShiLtJ_P0088577 Sgol2b protein_coding protein_coding MGP_NODShiLtJ_T0015848.1 MGP_NODShiLtJ_G0013956.1 mouse_genomes_project 8 36802365 36803312 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009111.1 MGP_NODShiLtJ_G0007313.1 mouse_genomes_project 8 135919575 136028702 - Gm26815 lincRNA lincRNA MGP_NODShiLtJ_T0090123.1 MGP_NODShiLtJ_G0033950.1 mouse_genomes_project 8 125517148 125608252 - MGP_NODShiLtJ_P0090123 Cfdp1 protein_coding protein_coding MGP_NODShiLtJ_T0087801.1 MGP_NODShiLtJ_G0033177.1 mouse_genomes_project 8 11567329 11592286 - MGP_NODShiLtJ_P0087801 Grtp1 protein_coding protein_coding MGP_NODShiLtJ_T0087921.1 MGP_NODShiLtJ_G0033223.1 mouse_genomes_project 8 18150446 18158698 + MGP_NODShiLtJ_P0087921 Defb6 protein_coding protein_coding MGP_NODShiLtJ_T0100848.1 MGP_NODShiLtJ_G0039242.1 mouse_genomes_project 8 127461009 127461140 - Gm25766 snoRNA snoRNA MGP_NODShiLtJ_T0015891.1 MGP_NODShiLtJ_G0013999.1 mouse_genomes_project 8 117795496 117796521 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098101.1 MGP_NODShiLtJ_G0036513.1 mouse_genomes_project 8 142767798 142767916 + Gm22968 rRNA rRNA MGP_NODShiLtJ_T0088870.1 MGP_NODShiLtJ_G0033536.1 mouse_genomes_project 8 79144684 79146986 + MGP_NODShiLtJ_P0088870 protein_coding protein_coding MGP_NODShiLtJ_T0090520.1 MGP_NODShiLtJ_G0034065.1 mouse_genomes_project 8 138674040 138704048 + MGP_NODShiLtJ_P0090520 Rab4a protein_coding protein_coding MGP_NODShiLtJ_T0090521.1 MGP_NODShiLtJ_G0034065.1 mouse_genomes_project 8 138674123 138703246 + MGP_NODShiLtJ_P0090521 Rab4a protein_coding protein_coding MGP_NODShiLtJ_T0088629.1 MGP_NODShiLtJ_G0033465.1 mouse_genomes_project 8 76293977 76384094 + MGP_NODShiLtJ_P0088629 Sh2d4a protein_coding protein_coding MGP_NODShiLtJ_T0005287.1 MGP_NODShiLtJ_G0004476.1 mouse_genomes_project 8 22345082 22355838 - Gm15816 antisense antisense MGP_NODShiLtJ_T0089624.1 MGP_NODShiLtJ_G0033770.1 mouse_genomes_project 8 105196591 105220852 - MGP_NODShiLtJ_P0089624 Pllp protein_coding protein_coding MGP_NODShiLtJ_T0088646.1 MGP_NODShiLtJ_G0033468.1 mouse_genomes_project 8 76964536 76993683 + MGP_NODShiLtJ_P0088646 Lpl protein_coding protein_coding MGP_NODShiLtJ_T0088647.1 MGP_NODShiLtJ_G0033468.1 mouse_genomes_project 8 76964600 76994196 + MGP_NODShiLtJ_P0088647 Lpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088648.1 MGP_NODShiLtJ_G0033468.1 mouse_genomes_project 8 76964702 76975392 + Lpl protein_coding retained_intron MGP_NODShiLtJ_T0088649.1 MGP_NODShiLtJ_G0033468.1 mouse_genomes_project 8 76976464 76981538 + Lpl protein_coding processed_transcript MGP_NODShiLtJ_T0098088.1 MGP_NODShiLtJ_G0036500.1 mouse_genomes_project 8 2228518 2228637 - n-R5s93 rRNA rRNA MGP_NODShiLtJ_T0005316.1 MGP_NODShiLtJ_G0004500.1 mouse_genomes_project 8 94394640 94400630 - Gm16183 antisense antisense MGP_NODShiLtJ_T0089376.1 MGP_NODShiLtJ_G0033691.1 mouse_genomes_project 8 94832555 94839968 - MGP_NODShiLtJ_P0089376 Best2 protein_coding protein_coding MGP_NODShiLtJ_T0005306.1 MGP_NODShiLtJ_G0004492.1 mouse_genomes_project 8 74197095 74200529 - Gm15356 antisense antisense MGP_NODShiLtJ_T0089309.1 MGP_NODShiLtJ_G0033675.1 mouse_genomes_project 8 94614547 94621709 - MGP_NODShiLtJ_P0089309 Dand5 protein_coding protein_coding MGP_NODShiLtJ_T0009099.1 MGP_NODShiLtJ_G0007303.1 mouse_genomes_project 8 124446780 124539145 - Gm26816 lincRNA lincRNA MGP_NODShiLtJ_T0088501.1 MGP_NODShiLtJ_G0033425.1 mouse_genomes_project 8 62034424 62078263 + MGP_NODShiLtJ_P0088501 Fbxo8 protein_coding protein_coding MGP_NODShiLtJ_T0088502.1 MGP_NODShiLtJ_G0033425.1 mouse_genomes_project 8 62035381 62056411 + Fbxo8 protein_coding retained_intron MGP_NODShiLtJ_T0005267.1 MGP_NODShiLtJ_G0004462.1 mouse_genomes_project 8 9414959 9432617 + Gm15418 antisense antisense MGP_NODShiLtJ_T0005281.1 MGP_NODShiLtJ_G0004472.1 mouse_genomes_project 8 14857541 14863845 + Gm16346 antisense antisense MGP_NODShiLtJ_T0015843.1 MGP_NODShiLtJ_G0013951.1 mouse_genomes_project 8 28013574 28014562 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089606.1 MGP_NODShiLtJ_G0033765.1 mouse_genomes_project 8 104949994 105045304 + MGP_NODShiLtJ_P0089606 Nlrc5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089607.1 MGP_NODShiLtJ_G0033765.1 mouse_genomes_project 8 104983407 105045314 + MGP_NODShiLtJ_P0089607 Nlrc5 protein_coding protein_coding MGP_NODShiLtJ_T0089608.1 MGP_NODShiLtJ_G0033765.1 mouse_genomes_project 8 104986766 105021729 + Nlrc5 protein_coding retained_intron MGP_NODShiLtJ_T0089609.1 MGP_NODShiLtJ_G0033765.1 mouse_genomes_project 8 104996475 105006021 + MGP_NODShiLtJ_P0089609 Nlrc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089610.1 MGP_NODShiLtJ_G0033765.1 mouse_genomes_project 8 105039471 105041550 + Nlrc5 protein_coding retained_intron MGP_NODShiLtJ_T0089611.1 MGP_NODShiLtJ_G0033765.1 mouse_genomes_project 8 105043106 105045310 + Nlrc5 protein_coding retained_intron MGP_NODShiLtJ_T0089612.1 MGP_NODShiLtJ_G0033765.1 mouse_genomes_project 8 105043106 105045306 + MGP_NODShiLtJ_P0089612 Nlrc5 protein_coding protein_coding MGP_NODShiLtJ_T0010867.1 MGP_NODShiLtJ_G0009000.1 mouse_genomes_project 8 80928207 80928281 - Mir7068 miRNA miRNA MGP_NODShiLtJ_T0005328.1 MGP_NODShiLtJ_G0004510.1 mouse_genomes_project 8 122338409 122342010 - Gm20686 antisense antisense MGP_NODShiLtJ_T0087951.1 MGP_NODShiLtJ_G0033250.1 mouse_genomes_project 8 21174162 21185065 + MGP_NODShiLtJ_P0087951 Alg11 protein_coding protein_coding MGP_NODShiLtJ_T0087952.1 MGP_NODShiLtJ_G0033250.1 mouse_genomes_project 8 21174163 21185065 + MGP_NODShiLtJ_P0087952 Alg11 protein_coding protein_coding MGP_NODShiLtJ_T0087953.1 MGP_NODShiLtJ_G0033250.1 mouse_genomes_project 8 21174181 21178889 + MGP_NODShiLtJ_P0087953 Alg11 protein_coding protein_coding MGP_NODShiLtJ_T0087954.1 MGP_NODShiLtJ_G0033250.1 mouse_genomes_project 8 21182453 21183317 + Alg11 protein_coding processed_transcript MGP_NODShiLtJ_T0090265.1 MGP_NODShiLtJ_G0034003.1 mouse_genomes_project 8 134744170 134754864 - MGP_NODShiLtJ_P0090265 Fam92b protein_coding protein_coding MGP_NODShiLtJ_T0090266.1 MGP_NODShiLtJ_G0034003.1 mouse_genomes_project 8 134745159 134754761 - Fam92b protein_coding retained_intron MGP_NODShiLtJ_T0090267.1 MGP_NODShiLtJ_G0034003.1 mouse_genomes_project 8 134749513 134754825 - MGP_NODShiLtJ_P0090267 Fam92b protein_coding protein_coding MGP_NODShiLtJ_T0090268.1 MGP_NODShiLtJ_G0034003.1 mouse_genomes_project 8 134752114 134754845 - Fam92b protein_coding retained_intron MGP_NODShiLtJ_T0088655.1 MGP_NODShiLtJ_G0033470.1 mouse_genomes_project 8 77187368 77215913 + MGP_NODShiLtJ_P0088655 Atp6v1b2 protein_coding protein_coding MGP_NODShiLtJ_T0088656.1 MGP_NODShiLtJ_G0033470.1 mouse_genomes_project 8 77187490 77209931 + Atp6v1b2 protein_coding retained_intron MGP_NODShiLtJ_T0088657.1 MGP_NODShiLtJ_G0033470.1 mouse_genomes_project 8 77187509 77203896 + Atp6v1b2 protein_coding retained_intron MGP_NODShiLtJ_T0088658.1 MGP_NODShiLtJ_G0033470.1 mouse_genomes_project 8 77187511 77195309 + Atp6v1b2 protein_coding retained_intron MGP_NODShiLtJ_T0088659.1 MGP_NODShiLtJ_G0033470.1 mouse_genomes_project 8 77203859 77204710 + Atp6v1b2 protein_coding retained_intron MGP_NODShiLtJ_T0088660.1 MGP_NODShiLtJ_G0033470.1 mouse_genomes_project 8 77204774 77210908 + Atp6v1b2 protein_coding retained_intron MGP_NODShiLtJ_T0089128.1 MGP_NODShiLtJ_G0033619.1 mouse_genomes_project 8 88948480 88980658 - MGP_NODShiLtJ_P0089128 Abce1 protein_coding protein_coding MGP_NODShiLtJ_T0089922.1 MGP_NODShiLtJ_G0033884.1 mouse_genomes_project 8 119386603 119472814 - MGP_NODShiLtJ_P0089922 Smpd3 protein_coding protein_coding MGP_NODShiLtJ_T0089233.1 MGP_NODShiLtJ_G0033658.1 mouse_genomes_project 8 93809894 93841792 + MGP_NODShiLtJ_P0089233 Rfx1 protein_coding protein_coding MGP_NODShiLtJ_T0009100.1 MGP_NODShiLtJ_G0007304.1 mouse_genomes_project 8 134676525 134678848 + A130014A01Rik lincRNA lincRNA MGP_NODShiLtJ_T0097832.1 MGP_NODShiLtJ_G0036244.1 mouse_genomes_project 8 7978878 7979228 - pseudogene pseudogene MGP_NODShiLtJ_T0099571.1 MGP_NODShiLtJ_G0037965.1 mouse_genomes_project 8 125637145 125637249 + Gm23853 snRNA snRNA MGP_NODShiLtJ_T0010905.1 MGP_NODShiLtJ_G0009038.1 mouse_genomes_project 8 124130225 124130322 - Gm44489 miRNA miRNA MGP_NODShiLtJ_T0087612.1 MGP_NODShiLtJ_G0033121.1 mouse_genomes_project 8 662094 667072 + MGP_NODShiLtJ_P0087612 Trappc5 protein_coding protein_coding MGP_NODShiLtJ_T0088441.1 MGP_NODShiLtJ_G0033404.1 mouse_genomes_project 8 50582488 50590469 - MGP_NODShiLtJ_P0088441 Ing2 protein_coding protein_coding MGP_NODShiLtJ_T0088442.1 MGP_NODShiLtJ_G0033404.1 mouse_genomes_project 8 50582488 50589000 - MGP_NODShiLtJ_P0088442 Ing2 protein_coding protein_coding MGP_NODShiLtJ_T0088443.1 MGP_NODShiLtJ_G0033404.1 mouse_genomes_project 8 50584065 50590867 - MGP_NODShiLtJ_P0088443 Ing2 protein_coding protein_coding MGP_NODShiLtJ_T0089708.1 MGP_NODShiLtJ_G0033798.1 mouse_genomes_project 8 106424853 106443294 - MGP_NODShiLtJ_P0089708 Slc38a7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089709.1 MGP_NODShiLtJ_G0033798.1 mouse_genomes_project 8 106429627 106431406 - Slc38a7 protein_coding retained_intron MGP_NODShiLtJ_T0089710.1 MGP_NODShiLtJ_G0033798.1 mouse_genomes_project 8 106431604 106433580 - Slc38a7 protein_coding retained_intron MGP_NODShiLtJ_T0015897.1 MGP_NODShiLtJ_G0014005.1 mouse_genomes_project 8 131429349 131429753 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087659.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1298888 1317243 - Timm44 protein_coding retained_intron MGP_NODShiLtJ_T0087660.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1298888 1317271 - MGP_NODShiLtJ_P0087660 Timm44 protein_coding protein_coding MGP_NODShiLtJ_T0087661.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1298906 1317229 - MGP_NODShiLtJ_P0087661 Timm44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087662.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1299141 1299893 - Timm44 protein_coding retained_intron MGP_NODShiLtJ_T0087663.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1299257 1306174 - Timm44 protein_coding retained_intron MGP_NODShiLtJ_T0087664.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1305241 1306111 - Timm44 protein_coding retained_intron MGP_NODShiLtJ_T0087665.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1305422 1306791 - Timm44 protein_coding retained_intron MGP_NODShiLtJ_T0087666.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1306472 1317240 - Timm44 protein_coding processed_transcript MGP_NODShiLtJ_T0087667.1 MGP_NODShiLtJ_G0033136.1 mouse_genomes_project 8 1306530 1317231 - Timm44 protein_coding retained_intron MGP_NODShiLtJ_T0089596.1 MGP_NODShiLtJ_G0033760.1 mouse_genomes_project 8 104659149 104660099 + MGP_NODShiLtJ_P0089596 Mt2 protein_coding protein_coding MGP_NODShiLtJ_T0005313.1 MGP_NODShiLtJ_G0004498.1 mouse_genomes_project 8 86592718 86595037 + 0610038B21Rik antisense antisense MGP_NODShiLtJ_T0005314.1 MGP_NODShiLtJ_G0004498.1 mouse_genomes_project 8 86594574 86600446 + 0610038B21Rik antisense antisense MGP_NODShiLtJ_T0090461.1 MGP_NODShiLtJ_G0034050.1 mouse_genomes_project 8 138003761 138017898 + MGP_NODShiLtJ_P0090461 Spata33 protein_coding protein_coding MGP_NODShiLtJ_T0005290.1 MGP_NODShiLtJ_G0004478.1 mouse_genomes_project 8 26681151 26681817 - Proscos antisense antisense MGP_NODShiLtJ_T0005291.1 MGP_NODShiLtJ_G0004478.1 mouse_genomes_project 8 26681156 26681772 - Proscos antisense antisense MGP_NODShiLtJ_T0089837.1 MGP_NODShiLtJ_G0033849.1 mouse_genomes_project 8 118513219 118519062 - MGP_NODShiLtJ_P0089837 Tppp3 protein_coding protein_coding MGP_NODShiLtJ_T0089838.1 MGP_NODShiLtJ_G0033849.1 mouse_genomes_project 8 118513395 118516946 - MGP_NODShiLtJ_P0089838 Tppp3 protein_coding protein_coding MGP_NODShiLtJ_T0089839.1 MGP_NODShiLtJ_G0033849.1 mouse_genomes_project 8 118513409 118516198 - MGP_NODShiLtJ_P0089839 Tppp3 protein_coding protein_coding MGP_NODShiLtJ_T0088746.1 MGP_NODShiLtJ_G0033500.1 mouse_genomes_project 8 78401673 78429797 - Slc25a42 protein_coding retained_intron MGP_NODShiLtJ_T0088747.1 MGP_NODShiLtJ_G0033500.1 mouse_genomes_project 8 78401673 78429797 - MGP_NODShiLtJ_P0088747 Slc25a42 protein_coding protein_coding MGP_NODShiLtJ_T0088748.1 MGP_NODShiLtJ_G0033500.1 mouse_genomes_project 8 78401673 78429748 - MGP_NODShiLtJ_P0088748 Slc25a42 protein_coding protein_coding MGP_NODShiLtJ_T0088749.1 MGP_NODShiLtJ_G0033500.1 mouse_genomes_project 8 78404929 78429797 - Slc25a42 protein_coding retained_intron MGP_NODShiLtJ_T0088750.1 MGP_NODShiLtJ_G0033500.1 mouse_genomes_project 8 78409582 78429797 - Slc25a42 protein_coding retained_intron MGP_NODShiLtJ_T0087922.1 MGP_NODShiLtJ_G0033224.1 mouse_genomes_project 8 18170422 18173695 + MGP_NODShiLtJ_P0087922 Defb46 protein_coding protein_coding MGP_NODShiLtJ_T0005310.1 MGP_NODShiLtJ_G0004495.1 mouse_genomes_project 8 76517244 76518779 + Gm15656 antisense antisense MGP_NODShiLtJ_T0088107.1 MGP_NODShiLtJ_G0033294.1 mouse_genomes_project 8 25228325 25248996 - MGP_NODShiLtJ_P0088107 Bag4 protein_coding protein_coding MGP_NODShiLtJ_T0018280.1 MGP_NODShiLtJ_G0015570.1 mouse_genomes_project 8 1191497 1238940 - 4932443L11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018281.1 MGP_NODShiLtJ_G0015570.1 mouse_genomes_project 8 1208625 1238345 - 4932443L11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0100815.1 MGP_NODShiLtJ_G0039209.1 mouse_genomes_project 8 62004067 62004199 - Gm24375 snoRNA snoRNA MGP_NODShiLtJ_T0011611.1 MGP_NODShiLtJ_G0009744.1 mouse_genomes_project 8 93465948 93466235 + Gm22024 misc_RNA misc_RNA MGP_NODShiLtJ_T0089153.1 MGP_NODShiLtJ_G0033629.1 mouse_genomes_project 8 92403108 92413683 - MGP_NODShiLtJ_P0089153 Zfp330 protein_coding protein_coding MGP_NODShiLtJ_T0089687.1 MGP_NODShiLtJ_G0033792.1 mouse_genomes_project 8 106083621 106114349 + MGP_NODShiLtJ_P0089687 Ccdc113 protein_coding protein_coding MGP_NODShiLtJ_T0009088.1 MGP_NODShiLtJ_G0007295.1 mouse_genomes_project 8 115235508 115266346 + lincRNA lincRNA MGP_NODShiLtJ_T0010882.1 MGP_NODShiLtJ_G0009015.1 mouse_genomes_project 8 94670204 94670266 + Mir7069 miRNA miRNA MGP_NODShiLtJ_T0010883.1 MGP_NODShiLtJ_G0009016.1 mouse_genomes_project 8 94733661 94733770 - Gm24197 miRNA miRNA MGP_NODShiLtJ_T0088138.1 MGP_NODShiLtJ_G0033308.1 mouse_genomes_project 8 26728370 26768936 + MGP_NODShiLtJ_P0088138 Adgra2 protein_coding protein_coding MGP_NODShiLtJ_T0088139.1 MGP_NODShiLtJ_G0033308.1 mouse_genomes_project 8 26728385 26768937 + MGP_NODShiLtJ_P0088139 Adgra2 protein_coding protein_coding MGP_NODShiLtJ_T0088140.1 MGP_NODShiLtJ_G0033308.1 mouse_genomes_project 8 26759654 26764356 + MGP_NODShiLtJ_P0088140 Adgra2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088141.1 MGP_NODShiLtJ_G0033308.1 mouse_genomes_project 8 26762890 26767124 + MGP_NODShiLtJ_P0088141 Adgra2 protein_coding protein_coding MGP_NODShiLtJ_T0089842.1 MGP_NODShiLtJ_G0033852.1 mouse_genomes_project 8 118572758 118615848 - MGP_NODShiLtJ_P0089842 Atp6v0d1 protein_coding protein_coding MGP_NODShiLtJ_T0089843.1 MGP_NODShiLtJ_G0033852.1 mouse_genomes_project 8 118578944 118588985 - Atp6v0d1 protein_coding retained_intron MGP_NODShiLtJ_T0090026.1 MGP_NODShiLtJ_G0033924.1 mouse_genomes_project 8 123642912 123644903 + MGP_NODShiLtJ_P0090026 Gm21964 protein_coding protein_coding MGP_NODShiLtJ_T0009042.1 MGP_NODShiLtJ_G0007267.1 mouse_genomes_project 8 93963021 93963708 + Gm26532 lincRNA lincRNA MGP_NODShiLtJ_T0088262.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42263425 42285913 - MGP_NODShiLtJ_P0088262 Cnot7 protein_coding protein_coding MGP_NODShiLtJ_T0088263.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42263427 42290051 - MGP_NODShiLtJ_P0088263 Cnot7 protein_coding protein_coding MGP_NODShiLtJ_T0088264.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42263428 42285877 - Cnot7 protein_coding retained_intron MGP_NODShiLtJ_T0088265.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42263432 42285877 - MGP_NODShiLtJ_P0088265 Cnot7 protein_coding protein_coding MGP_NODShiLtJ_T0088266.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42263922 42285462 - MGP_NODShiLtJ_P0088266 Cnot7 protein_coding protein_coding MGP_NODShiLtJ_T0088267.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42264900 42275262 - Cnot7 protein_coding processed_transcript MGP_NODShiLtJ_T0088268.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42269930 42281862 - Cnot7 protein_coding retained_intron MGP_NODShiLtJ_T0088270.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42274922 42281779 - Cnot7 protein_coding processed_transcript MGP_NODShiLtJ_T0088271.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42281511 42285881 - Cnot7 protein_coding processed_transcript MGP_NODShiLtJ_T0088272.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42284180 42290039 - Cnot7 protein_coding processed_transcript MGP_NODShiLtJ_T0088273.1 MGP_NODShiLtJ_G0033359.1 mouse_genomes_project 8 42284260 42285462 - Cnot7 protein_coding processed_transcript MGP_NODShiLtJ_T0089132.1 MGP_NODShiLtJ_G0033622.1 mouse_genomes_project 8 89819639 89837787 + MGP_NODShiLtJ_P0089132 Gypa protein_coding protein_coding MGP_NODShiLtJ_T0011615.1 MGP_NODShiLtJ_G0009748.1 mouse_genomes_project 8 118223742 118223831 + Gm24629 misc_RNA misc_RNA MGP_NODShiLtJ_T0089801.1 MGP_NODShiLtJ_G0033836.1 mouse_genomes_project 8 118294514 118300400 + MGP_NODShiLtJ_P0089801 Hsf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089802.1 MGP_NODShiLtJ_G0033836.1 mouse_genomes_project 8 118294542 118300557 + MGP_NODShiLtJ_P0089802 Hsf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089803.1 MGP_NODShiLtJ_G0033836.1 mouse_genomes_project 8 118294587 118300372 + MGP_NODShiLtJ_P0089803 Hsf4 protein_coding protein_coding MGP_NODShiLtJ_T0089804.1 MGP_NODShiLtJ_G0033836.1 mouse_genomes_project 8 118294587 118300372 + MGP_NODShiLtJ_P0089804 Hsf4 protein_coding protein_coding MGP_NODShiLtJ_T0089805.1 MGP_NODShiLtJ_G0033836.1 mouse_genomes_project 8 118294587 118300559 + MGP_NODShiLtJ_P0089805 Hsf4 protein_coding protein_coding MGP_NODShiLtJ_T0088768.1 MGP_NODShiLtJ_G0033503.1 mouse_genomes_project 8 78506993 78511817 + MGP_NODShiLtJ_P0088768 Homer3 protein_coding protein_coding MGP_NODShiLtJ_T0088769.1 MGP_NODShiLtJ_G0033503.1 mouse_genomes_project 8 78506993 78521633 + MGP_NODShiLtJ_P0088769 Homer3 protein_coding protein_coding MGP_NODShiLtJ_T0088770.1 MGP_NODShiLtJ_G0033503.1 mouse_genomes_project 8 78507165 78521633 + MGP_NODShiLtJ_P0088770 Homer3 protein_coding protein_coding MGP_NODShiLtJ_T0088771.1 MGP_NODShiLtJ_G0033503.1 mouse_genomes_project 8 78507200 78511589 + Homer3 protein_coding retained_intron MGP_NODShiLtJ_T0088772.1 MGP_NODShiLtJ_G0033503.1 mouse_genomes_project 8 78510532 78521625 + MGP_NODShiLtJ_P0088772 Homer3 protein_coding protein_coding MGP_NODShiLtJ_T0088773.1 MGP_NODShiLtJ_G0033503.1 mouse_genomes_project 8 78511217 78519010 + Homer3 protein_coding retained_intron MGP_NODShiLtJ_T0088774.1 MGP_NODShiLtJ_G0033503.1 mouse_genomes_project 8 78516445 78518875 + Homer3 protein_coding retained_intron MGP_NODShiLtJ_T0088775.1 MGP_NODShiLtJ_G0033503.1 mouse_genomes_project 8 78518347 78520741 + MGP_NODShiLtJ_P0088775 Homer3 protein_coding protein_coding MGP_NODShiLtJ_T0018326.1 MGP_NODShiLtJ_G0015589.1 mouse_genomes_project 8 110900727 111016971 - Gm15680 processed_transcript processed_transcript MGP_NODShiLtJ_T0009033.1 MGP_NODShiLtJ_G0007260.1 mouse_genomes_project 8 83252308 83518091 - lincRNA lincRNA MGP_NODShiLtJ_T0009034.1 MGP_NODShiLtJ_G0007260.1 mouse_genomes_project 8 83512114 83518064 - lincRNA lincRNA MGP_NODShiLtJ_T0087737.1 MGP_NODShiLtJ_G0033165.1 mouse_genomes_project 8 10739967 10745819 + MGP_NODShiLtJ_P0087737 Sox1 protein_coding protein_coding MGP_NODShiLtJ_T0088254.1 MGP_NODShiLtJ_G0033357.1 mouse_genomes_project 8 42071092 42150507 + MGP_NODShiLtJ_P0088254 Micu3 protein_coding protein_coding MGP_NODShiLtJ_T0088255.1 MGP_NODShiLtJ_G0033357.1 mouse_genomes_project 8 42113813 42152806 + MGP_NODShiLtJ_P0088255 Micu3 protein_coding protein_coding MGP_NODShiLtJ_T0088256.1 MGP_NODShiLtJ_G0033357.1 mouse_genomes_project 8 42127986 42141448 + Micu3 protein_coding retained_intron MGP_NODShiLtJ_T0089867.1 MGP_NODShiLtJ_G0033864.1 mouse_genomes_project 8 118934418 118941798 - MGP_NODShiLtJ_P0089867 Cenpt protein_coding protein_coding MGP_NODShiLtJ_T0009105.1 MGP_NODShiLtJ_G0007309.1 mouse_genomes_project 8 135515597 135517873 + Gm26878 lincRNA lincRNA MGP_NODShiLtJ_T0099552.1 MGP_NODShiLtJ_G0037946.1 mouse_genomes_project 8 85230753 85230860 - Gm22509 snRNA snRNA MGP_NODShiLtJ_T0089416.1 MGP_NODShiLtJ_G0033704.1 mouse_genomes_project 8 95077323 95123513 - MGP_NODShiLtJ_P0089416 Vps35 protein_coding protein_coding MGP_NODShiLtJ_T0008997.1 MGP_NODShiLtJ_G0007229.1 mouse_genomes_project 8 23760656 23778338 + Gm26714 lincRNA lincRNA MGP_NODShiLtJ_T0100827.1 MGP_NODShiLtJ_G0039221.1 mouse_genomes_project 8 81640851 81640991 - Gm22532 snoRNA snoRNA MGP_NODShiLtJ_T0005345.1 MGP_NODShiLtJ_G0004525.1 mouse_genomes_project 8 136636886 136637858 - Gm27011 antisense antisense MGP_NODShiLtJ_T0005318.1 MGP_NODShiLtJ_G0004502.1 mouse_genomes_project 8 101951526 101959774 - Gm3235 antisense antisense MGP_NODShiLtJ_T0089379.1 MGP_NODShiLtJ_G0033694.1 mouse_genomes_project 8 94863267 94887110 + MGP_NODShiLtJ_P0089379 Tnpo2 protein_coding protein_coding MGP_NODShiLtJ_T0089380.1 MGP_NODShiLtJ_G0033694.1 mouse_genomes_project 8 94863520 94887110 + MGP_NODShiLtJ_P0089380 Tnpo2 protein_coding protein_coding MGP_NODShiLtJ_T0089381.1 MGP_NODShiLtJ_G0033694.1 mouse_genomes_project 8 94864743 94887114 + MGP_NODShiLtJ_P0089381 Tnpo2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088951.1 MGP_NODShiLtJ_G0033564.1 mouse_genomes_project 8 79902476 79908522 - MGP_NODShiLtJ_P0088951 Nxnl1 protein_coding protein_coding MGP_NODShiLtJ_T0088952.1 MGP_NODShiLtJ_G0033564.1 mouse_genomes_project 8 79902476 79908570 - MGP_NODShiLtJ_P0088952 Nxnl1 protein_coding protein_coding MGP_NODShiLtJ_T0087707.1 MGP_NODShiLtJ_G0033155.1 mouse_genomes_project 8 9550411 9690300 + MGP_NODShiLtJ_P0087707 Col4a2 protein_coding protein_coding MGP_NODShiLtJ_T0087708.1 MGP_NODShiLtJ_G0033155.1 mouse_genomes_project 8 9643563 9659902 + MGP_NODShiLtJ_P0087708 Col4a2 protein_coding protein_coding MGP_NODShiLtJ_T0087709.1 MGP_NODShiLtJ_G0033155.1 mouse_genomes_project 8 9682121 9684715 + Col4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0005292.1 MGP_NODShiLtJ_G0004479.1 mouse_genomes_project 8 34361407 34382435 + Gm26632 antisense antisense MGP_NODShiLtJ_T0087691.1 MGP_NODShiLtJ_G0033144.1 mouse_genomes_project 8 2916024 2917087 + MGP_NODShiLtJ_P0087691 protein_coding protein_coding MGP_NODShiLtJ_T0088252.1 MGP_NODShiLtJ_G0033356.1 mouse_genomes_project 8 42030184 42039939 - MGP_NODShiLtJ_P0088252 Fgf20 protein_coding protein_coding MGP_NODShiLtJ_T0088253.1 MGP_NODShiLtJ_G0033356.1 mouse_genomes_project 8 42032765 42071962 - MGP_NODShiLtJ_P0088253 Fgf20 protein_coding protein_coding MGP_NODShiLtJ_T0088596.1 MGP_NODShiLtJ_G0033454.1 mouse_genomes_project 8 72578306 72580754 + MGP_NODShiLtJ_P0088596 Gm10663 protein_coding protein_coding MGP_NODShiLtJ_T0088282.1 MGP_NODShiLtJ_G0033363.1 mouse_genomes_project 8 42667086 42725125 + MGP_NODShiLtJ_P0088282 Slc7a2 protein_coding protein_coding MGP_NODShiLtJ_T0088283.1 MGP_NODShiLtJ_G0033363.1 mouse_genomes_project 8 42667102 42729404 + MGP_NODShiLtJ_P0088283 Slc7a2 protein_coding protein_coding MGP_NODShiLtJ_T0088284.1 MGP_NODShiLtJ_G0033363.1 mouse_genomes_project 8 42667268 42704826 + MGP_NODShiLtJ_P0088284 Slc7a2 protein_coding protein_coding MGP_NODShiLtJ_T0088285.1 MGP_NODShiLtJ_G0033363.1 mouse_genomes_project 8 42679184 42729166 + MGP_NODShiLtJ_P0088285 Slc7a2 protein_coding protein_coding MGP_NODShiLtJ_T0088286.1 MGP_NODShiLtJ_G0033363.1 mouse_genomes_project 8 42704279 42724795 + MGP_NODShiLtJ_P0088286 Slc7a2 protein_coding protein_coding MGP_NODShiLtJ_T0018292.1 MGP_NODShiLtJ_G0015577.1 mouse_genomes_project 8 43041445 43044143 + Gm16348 processed_transcript processed_transcript MGP_NODShiLtJ_T0018293.1 MGP_NODShiLtJ_G0015577.1 mouse_genomes_project 8 43041446 43043775 + Gm16348 processed_transcript processed_transcript MGP_NODShiLtJ_T0088122.1 MGP_NODShiLtJ_G0033302.1 mouse_genomes_project 8 25516845 25620711 - MGP_NODShiLtJ_P0088122 Hook3 protein_coding protein_coding MGP_NODShiLtJ_T0088123.1 MGP_NODShiLtJ_G0033302.1 mouse_genomes_project 8 25534199 25571342 - MGP_NODShiLtJ_P0088123 Hook3 protein_coding protein_coding MGP_NODShiLtJ_T0088124.1 MGP_NODShiLtJ_G0033302.1 mouse_genomes_project 8 25534208 25541444 - Hook3 protein_coding retained_intron MGP_NODShiLtJ_T0088533.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67506182 67553903 - MGP_NODShiLtJ_P0088533 Clcn3 protein_coding protein_coding MGP_NODShiLtJ_T0088534.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67506659 67518783 - Clcn3 protein_coding processed_transcript MGP_NODShiLtJ_T0088535.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67507694 67554030 - MGP_NODShiLtJ_P0088535 Clcn3 protein_coding protein_coding MGP_NODShiLtJ_T0088536.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67507721 67554515 - Clcn3 protein_coding retained_intron MGP_NODShiLtJ_T0088537.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67507721 67585281 - MGP_NODShiLtJ_P0088537 Clcn3 protein_coding protein_coding MGP_NODShiLtJ_T0088538.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67507721 67585281 - MGP_NODShiLtJ_P0088538 Clcn3 protein_coding protein_coding MGP_NODShiLtJ_T0088539.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67524106 67554061 - Clcn3 protein_coding retained_intron MGP_NODShiLtJ_T0088540.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67531499 67585286 - Clcn3 protein_coding retained_intron MGP_NODShiLtJ_T0088541.1 MGP_NODShiLtJ_G0033437.1 mouse_genomes_project 8 67534782 67585328 - Clcn3 protein_coding retained_intron MGP_NODShiLtJ_T0009015.1 MGP_NODShiLtJ_G0007243.1 mouse_genomes_project 8 42667085 42670312 - Gm26584 lincRNA lincRNA MGP_NODShiLtJ_T0100845.1 MGP_NODShiLtJ_G0039239.1 mouse_genomes_project 8 124425106 124425182 - Gm22193 snoRNA snoRNA MGP_NODShiLtJ_T0011604.1 MGP_NODShiLtJ_G0009737.1 mouse_genomes_project 8 25765149 25765408 - Gm22227 misc_RNA misc_RNA MGP_NODShiLtJ_T0089129.1 MGP_NODShiLtJ_G0033620.1 mouse_genomes_project 8 88980737 89047502 + MGP_NODShiLtJ_P0089129 Anapc10 protein_coding protein_coding MGP_NODShiLtJ_T0010875.1 MGP_NODShiLtJ_G0009008.1 mouse_genomes_project 8 93829266 93829354 + Mir709 miRNA miRNA MGP_NODShiLtJ_T0100850.1 MGP_NODShiLtJ_G0039244.1 mouse_genomes_project 8 133177728 133177816 + Gm22999 snoRNA snoRNA MGP_NODShiLtJ_T0088556.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68183570 68279636 - MGP_NODShiLtJ_P0088556 Palld protein_coding protein_coding MGP_NODShiLtJ_T0088557.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68185389 68603514 - MGP_NODShiLtJ_P0088557 Palld protein_coding protein_coding MGP_NODShiLtJ_T0088558.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68185395 68449006 - MGP_NODShiLtJ_P0088558 Palld protein_coding protein_coding MGP_NODShiLtJ_T0088559.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68187163 68188139 - Palld protein_coding retained_intron MGP_NODShiLtJ_T0088560.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68187259 68603535 - MGP_NODShiLtJ_P0088560 Palld protein_coding protein_coding MGP_NODShiLtJ_T0088561.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68188151 68272276 - MGP_NODShiLtJ_P0088561 Palld protein_coding protein_coding MGP_NODShiLtJ_T0088562.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68201712 68210467 - Palld protein_coding retained_intron MGP_NODShiLtJ_T0088563.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68370457 68449015 - Palld protein_coding retained_intron MGP_NODShiLtJ_T0088564.1 MGP_NODShiLtJ_G0033441.1 mouse_genomes_project 8 68394194 68449006 - Palld protein_coding retained_intron MGP_NODShiLtJ_T0102225.1 MGP_NODShiLtJ_G0040391.1 mouse_genomes_project 8 18456366 20815088 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0088444.1 MGP_NODShiLtJ_G0033405.1 mouse_genomes_project 8 50590701 50592367 + MGP_NODShiLtJ_P0088444 protein_coding protein_coding MGP_NODShiLtJ_T0005348.1 MGP_NODShiLtJ_G0004528.1 mouse_genomes_project 8 139215565 139216941 - 1810008B01Rik antisense antisense MGP_NODShiLtJ_T0089178.1 MGP_NODShiLtJ_G0033642.1 mouse_genomes_project 8 93375282 93379718 + Ptger1 protein_coding retained_intron MGP_NODShiLtJ_T0089179.1 MGP_NODShiLtJ_G0033642.1 mouse_genomes_project 8 93375312 93381200 + MGP_NODShiLtJ_P0089179 Ptger1 protein_coding protein_coding MGP_NODShiLtJ_T0090514.1 MGP_NODShiLtJ_G0034062.1 mouse_genomes_project 8 138340909 138352643 - MGP_NODShiLtJ_P0090514 Dbndd1 protein_coding protein_coding MGP_NODShiLtJ_T0090515.1 MGP_NODShiLtJ_G0034062.1 mouse_genomes_project 8 138341878 138352600 - MGP_NODShiLtJ_P0090515 Dbndd1 protein_coding protein_coding MGP_NODShiLtJ_T0090516.1 MGP_NODShiLtJ_G0034062.1 mouse_genomes_project 8 138341878 138352643 - MGP_NODShiLtJ_P0090516 Dbndd1 protein_coding protein_coding MGP_NODShiLtJ_T0015823.1 MGP_NODShiLtJ_G0013931.1 mouse_genomes_project 8 2283256 2284288 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087826.1 MGP_NODShiLtJ_G0033187.1 mouse_genomes_project 8 11994287 12011372 - Rasa3 protein_coding retained_intron MGP_NODShiLtJ_T0087827.1 MGP_NODShiLtJ_G0033187.1 mouse_genomes_project 8 11994287 12109170 - MGP_NODShiLtJ_P0087827 Rasa3 protein_coding protein_coding MGP_NODShiLtJ_T0087828.1 MGP_NODShiLtJ_G0033187.1 mouse_genomes_project 8 12004803 12005377 - Rasa3 protein_coding retained_intron MGP_NODShiLtJ_T0087829.1 MGP_NODShiLtJ_G0033187.1 mouse_genomes_project 8 12023181 12033481 - Rasa3 protein_coding retained_intron MGP_NODShiLtJ_T0087830.1 MGP_NODShiLtJ_G0033187.1 mouse_genomes_project 8 12023182 12109018 - MGP_NODShiLtJ_P0087830 Rasa3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087831.1 MGP_NODShiLtJ_G0033187.1 mouse_genomes_project 8 12025467 12109050 - Rasa3 protein_coding retained_intron MGP_NODShiLtJ_T0099572.1 MGP_NODShiLtJ_G0037966.1 mouse_genomes_project 8 125850422 125850529 + Gm22827 snRNA snRNA MGP_NODShiLtJ_T0100836.1 MGP_NODShiLtJ_G0039230.1 mouse_genomes_project 8 101350298 101350430 - Gm22428 snoRNA snoRNA MGP_NODShiLtJ_T0090125.1 MGP_NODShiLtJ_G0033952.1 mouse_genomes_project 8 125651426 125678291 - MGP_NODShiLtJ_P0090125 Chst5 protein_coding protein_coding MGP_NODShiLtJ_T0087654.1 MGP_NODShiLtJ_G0033133.1 mouse_genomes_project 8 1287374 1290584 + MGP_NODShiLtJ_P0087654 Tgfbr3l protein_coding protein_coding MGP_NODShiLtJ_T0087655.1 MGP_NODShiLtJ_G0033133.1 mouse_genomes_project 8 1287793 1288682 + Tgfbr3l protein_coding processed_transcript MGP_NODShiLtJ_T0087656.1 MGP_NODShiLtJ_G0033133.1 mouse_genomes_project 8 1289489 1290584 + Tgfbr3l protein_coding processed_transcript MGP_NODShiLtJ_T0089366.1 MGP_NODShiLtJ_G0033688.1 mouse_genomes_project 8 94790718 94797084 + MGP_NODShiLtJ_P0089366 Prdx2 protein_coding protein_coding MGP_NODShiLtJ_T0089367.1 MGP_NODShiLtJ_G0033688.1 mouse_genomes_project 8 94790742 94797084 + MGP_NODShiLtJ_P0089367 Prdx2 protein_coding protein_coding MGP_NODShiLtJ_T0089368.1 MGP_NODShiLtJ_G0033688.1 mouse_genomes_project 8 94790825 94794424 + Prdx2 protein_coding retained_intron MGP_NODShiLtJ_T0089369.1 MGP_NODShiLtJ_G0033688.1 mouse_genomes_project 8 94790825 94792544 + Prdx2 protein_coding retained_intron MGP_NODShiLtJ_T0089370.1 MGP_NODShiLtJ_G0033688.1 mouse_genomes_project 8 94790898 94797084 + MGP_NODShiLtJ_P0089370 Prdx2 protein_coding protein_coding MGP_NODShiLtJ_T0089371.1 MGP_NODShiLtJ_G0033688.1 mouse_genomes_project 8 94790988 94793942 + MGP_NODShiLtJ_P0089371 Prdx2 protein_coding protein_coding MGP_NODShiLtJ_T0089372.1 MGP_NODShiLtJ_G0033688.1 mouse_genomes_project 8 94791370 94796909 + MGP_NODShiLtJ_P0089372 Prdx2 protein_coding protein_coding MGP_NODShiLtJ_T0089373.1 MGP_NODShiLtJ_G0033688.1 mouse_genomes_project 8 94792885 94796565 + Prdx2 protein_coding retained_intron MGP_NODShiLtJ_T0088597.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73168213 74229368 + protein_coding processed_transcript MGP_NODShiLtJ_T0088598.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73168322 74228779 + MGP_NODShiLtJ_P0088598 protein_coding protein_coding MGP_NODShiLtJ_T0088599.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73168338 74229121 + MGP_NODShiLtJ_P0088599 protein_coding protein_coding MGP_NODShiLtJ_T0088600.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73168350 73618282 + protein_coding retained_intron MGP_NODShiLtJ_T0088601.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73168399 74231045 + MGP_NODShiLtJ_P0088601 protein_coding protein_coding MGP_NODShiLtJ_T0088602.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73168838 74229835 + MGP_NODShiLtJ_P0088602 protein_coding protein_coding MGP_NODShiLtJ_T0088603.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73617110 74231033 + MGP_NODShiLtJ_P0088603 protein_coding protein_coding MGP_NODShiLtJ_T0088604.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73832240 74231033 + MGP_NODShiLtJ_P0088604 protein_coding protein_coding MGP_NODShiLtJ_T0088605.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 73832240 74231033 + MGP_NODShiLtJ_P0088605 protein_coding protein_coding MGP_NODShiLtJ_T0088606.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 74141656 74229829 + MGP_NODShiLtJ_P0088606 protein_coding protein_coding MGP_NODShiLtJ_T0088607.1 MGP_NODShiLtJ_G0033455.1 mouse_genomes_project 8 74141663 74229839 + MGP_NODShiLtJ_P0088607 protein_coding protein_coding MGP_NODShiLtJ_T0090023.1 MGP_NODShiLtJ_G0033921.1 mouse_genomes_project 8 123555560 123565904 - MGP_NODShiLtJ_P0090023 Chst4 protein_coding protein_coding MGP_NODShiLtJ_T0090028.1 MGP_NODShiLtJ_G0033926.1 mouse_genomes_project 8 123766012 123771562 + MGP_NODShiLtJ_P0090028 Cmtr2 protein_coding protein_coding MGP_NODShiLtJ_T0090029.1 MGP_NODShiLtJ_G0033926.1 mouse_genomes_project 8 123768336 123774834 + MGP_NODShiLtJ_P0090029 Cmtr2 protein_coding protein_coding MGP_NODShiLtJ_T0090430.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137821993 137841430 + MGP_NODShiLtJ_P0090430 Spg7 protein_coding protein_coding MGP_NODShiLtJ_T0090431.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137824230 137861559 + MGP_NODShiLtJ_P0090431 Spg7 protein_coding protein_coding MGP_NODShiLtJ_T0090432.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137824480 137861357 + MGP_NODShiLtJ_P0090432 Spg7 protein_coding protein_coding MGP_NODShiLtJ_T0090433.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137824527 137861552 + MGP_NODShiLtJ_P0090433 Spg7 protein_coding protein_coding MGP_NODShiLtJ_T0090434.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137824559 137861550 + Spg7 protein_coding retained_intron MGP_NODShiLtJ_T0090435.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137834326 137850407 + MGP_NODShiLtJ_P0090435 Spg7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090436.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137841851 137850433 + Spg7 protein_coding retained_intron MGP_NODShiLtJ_T0090437.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137842223 137861552 + MGP_NODShiLtJ_P0090437 Spg7 protein_coding protein_coding MGP_NODShiLtJ_T0090438.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137848682 137854992 + Spg7 protein_coding retained_intron MGP_NODShiLtJ_T0090439.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137848852 137853161 + Spg7 protein_coding processed_transcript MGP_NODShiLtJ_T0090440.1 MGP_NODShiLtJ_G0034044.1 mouse_genomes_project 8 137853120 137861552 + MGP_NODShiLtJ_P0090440 Spg7 protein_coding protein_coding MGP_NODShiLtJ_T0011618.1 MGP_NODShiLtJ_G0009751.1 mouse_genomes_project 8 126419396 126419501 + Gm22664 misc_RNA misc_RNA MGP_NODShiLtJ_T0088085.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25035267 25131766 + MGP_NODShiLtJ_P0088085 Whsc1l1 protein_coding protein_coding MGP_NODShiLtJ_T0088086.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25035950 25129459 + Whsc1l1 protein_coding retained_intron MGP_NODShiLtJ_T0088087.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25035950 25175220 + MGP_NODShiLtJ_P0088087 Whsc1l1 protein_coding protein_coding MGP_NODShiLtJ_T0088088.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25035950 25168908 + MGP_NODShiLtJ_P0088088 Whsc1l1 protein_coding protein_coding MGP_NODShiLtJ_T0088089.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25035950 25132524 + MGP_NODShiLtJ_P0088089 Whsc1l1 protein_coding protein_coding MGP_NODShiLtJ_T0088090.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25035985 25115449 + Whsc1l1 protein_coding retained_intron MGP_NODShiLtJ_T0088091.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25088455 25175220 + MGP_NODShiLtJ_P0088091 Whsc1l1 protein_coding protein_coding MGP_NODShiLtJ_T0088092.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25126285 25132502 + Whsc1l1 protein_coding retained_intron MGP_NODShiLtJ_T0088093.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25148799 25168908 + MGP_NODShiLtJ_P0088093 Whsc1l1 protein_coding protein_coding MGP_NODShiLtJ_T0088094.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25153152 25162621 + Whsc1l1 protein_coding retained_intron MGP_NODShiLtJ_T0088095.1 MGP_NODShiLtJ_G0033290.1 mouse_genomes_project 8 25154582 25155609 + Whsc1l1 protein_coding retained_intron MGP_NODShiLtJ_T0089019.1 MGP_NODShiLtJ_G0033580.1 mouse_genomes_project 8 80560893 80571168 + Tpm4 protein_coding processed_transcript MGP_NODShiLtJ_T0089020.1 MGP_NODShiLtJ_G0033580.1 mouse_genomes_project 8 80561767 80579195 + MGP_NODShiLtJ_P0089020 Tpm4 protein_coding protein_coding MGP_NODShiLtJ_T0088506.1 MGP_NODShiLtJ_G0033429.1 mouse_genomes_project 8 63176687 63185217 + MGP_NODShiLtJ_P0088506 protein_coding protein_coding MGP_NODShiLtJ_T0089414.1 MGP_NODShiLtJ_G0033702.1 mouse_genomes_project 8 94993187 94995674 + MGP_NODShiLtJ_P0089414 Cks1brt protein_coding protein_coding MGP_NODShiLtJ_T0090126.1 MGP_NODShiLtJ_G0033953.1 mouse_genomes_project 8 125680147 125704380 - MGP_NODShiLtJ_P0090126 Tmem231 protein_coding protein_coding MGP_NODShiLtJ_T0010846.1 MGP_NODShiLtJ_G0008979.1 mouse_genomes_project 8 12862196 12862304 + Gm44347 miRNA miRNA MGP_NODShiLtJ_T0088881.1 MGP_NODShiLtJ_G0033546.1 mouse_genomes_project 8 79444062 79481345 + MGP_NODShiLtJ_P0088881 protein_coding protein_coding MGP_NODShiLtJ_T0015824.1 MGP_NODShiLtJ_G0013932.1 mouse_genomes_project 8 9000431 9000872 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018290.1 MGP_NODShiLtJ_G0015576.1 mouse_genomes_project 8 42833792 42840503 + B430010I23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018291.1 MGP_NODShiLtJ_G0015576.1 mouse_genomes_project 8 42834062 42836862 + B430010I23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0089779.1 MGP_NODShiLtJ_G0033831.1 mouse_genomes_project 8 118186828 118237853 + MGP_NODShiLtJ_P0089779 Cbfb protein_coding protein_coding MGP_NODShiLtJ_T0089780.1 MGP_NODShiLtJ_G0033831.1 mouse_genomes_project 8 118186898 118237845 + MGP_NODShiLtJ_P0089780 Cbfb protein_coding protein_coding MGP_NODShiLtJ_T0089781.1 MGP_NODShiLtJ_G0033831.1 mouse_genomes_project 8 118186898 118237845 + MGP_NODShiLtJ_P0089781 Cbfb protein_coding protein_coding MGP_NODShiLtJ_T0089782.1 MGP_NODShiLtJ_G0033831.1 mouse_genomes_project 8 118187099 118237845 + MGP_NODShiLtJ_P0089782 Cbfb protein_coding protein_coding MGP_NODShiLtJ_T0089783.1 MGP_NODShiLtJ_G0033831.1 mouse_genomes_project 8 118187263 118197584 + Cbfb protein_coding retained_intron MGP_NODShiLtJ_T0089784.1 MGP_NODShiLtJ_G0033831.1 mouse_genomes_project 8 118187646 118214305 + Cbfb protein_coding processed_transcript MGP_NODShiLtJ_T0089785.1 MGP_NODShiLtJ_G0033831.1 mouse_genomes_project 8 118187718 118214285 + Cbfb protein_coding processed_transcript MGP_NODShiLtJ_T0088447.1 MGP_NODShiLtJ_G0033408.1 mouse_genomes_project 8 50775406 50777266 + MGP_NODShiLtJ_P0088447 protein_coding protein_coding MGP_NODShiLtJ_T0097842.1 MGP_NODShiLtJ_G0036254.1 mouse_genomes_project 8 132187793 132188966 + pseudogene pseudogene MGP_NODShiLtJ_T0090039.1 MGP_NODShiLtJ_G0033930.1 mouse_genomes_project 8 124318490 124319360 - Il34 protein_coding processed_transcript MGP_NODShiLtJ_T0090040.1 MGP_NODShiLtJ_G0033930.1 mouse_genomes_project 8 124318501 124388627 - MGP_NODShiLtJ_P0090040 Il34 protein_coding protein_coding MGP_NODShiLtJ_T0090041.1 MGP_NODShiLtJ_G0033930.1 mouse_genomes_project 8 124318501 124388596 - MGP_NODShiLtJ_P0090041 Il34 protein_coding protein_coding MGP_NODShiLtJ_T0090042.1 MGP_NODShiLtJ_G0033930.1 mouse_genomes_project 8 124331895 124372325 - Il34 protein_coding processed_transcript MGP_NODShiLtJ_T0090043.1 MGP_NODShiLtJ_G0033930.1 mouse_genomes_project 8 124332184 124388648 - Il34 protein_coding processed_transcript MGP_NODShiLtJ_T0089953.1 MGP_NODShiLtJ_G0033899.1 mouse_genomes_project 8 120262243 120266318 - MGP_NODShiLtJ_P0089953 Tmed6 protein_coding protein_coding MGP_NODShiLtJ_T0009104.1 MGP_NODShiLtJ_G0007308.1 mouse_genomes_project 8 135257902 135269072 + Gm26537 lincRNA lincRNA MGP_NODShiLtJ_T0089071.1 MGP_NODShiLtJ_G0033601.1 mouse_genomes_project 8 83793273 83801379 + MGP_NODShiLtJ_P0089071 Hmox1 protein_coding protein_coding MGP_NODShiLtJ_T0089072.1 MGP_NODShiLtJ_G0033601.1 mouse_genomes_project 8 83793323 83797234 + Hmox1 protein_coding retained_intron MGP_NODShiLtJ_T0089073.1 MGP_NODShiLtJ_G0033601.1 mouse_genomes_project 8 83793532 83797987 + MGP_NODShiLtJ_P0089073 Hmox1 protein_coding protein_coding MGP_NODShiLtJ_T0089496.1 MGP_NODShiLtJ_G0033726.1 mouse_genomes_project 8 98702523 98711757 - MGP_NODShiLtJ_P0089496 Snx20 protein_coding protein_coding MGP_NODShiLtJ_T0015889.1 MGP_NODShiLtJ_G0013997.1 mouse_genomes_project 8 110590483 110593187 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089527.1 MGP_NODShiLtJ_G0033736.1 mouse_genomes_project 8 101628960 101998404 + MGP_NODShiLtJ_P0089527 Fto protein_coding protein_coding MGP_NODShiLtJ_T0089528.1 MGP_NODShiLtJ_G0033736.1 mouse_genomes_project 8 101628963 101758996 + Fto protein_coding retained_intron MGP_NODShiLtJ_T0089529.1 MGP_NODShiLtJ_G0033736.1 mouse_genomes_project 8 101628986 101848290 + Fto protein_coding retained_intron MGP_NODShiLtJ_T0089530.1 MGP_NODShiLtJ_G0033736.1 mouse_genomes_project 8 101628996 101808836 + Fto protein_coding retained_intron MGP_NODShiLtJ_T0089531.1 MGP_NODShiLtJ_G0033736.1 mouse_genomes_project 8 101708577 101730693 + MGP_NODShiLtJ_P0089531 Fto protein_coding protein_coding MGP_NODShiLtJ_T0089532.1 MGP_NODShiLtJ_G0033736.1 mouse_genomes_project 8 101711399 101730317 + MGP_NODShiLtJ_P0089532 Fto protein_coding protein_coding MGP_NODShiLtJ_T0089533.1 MGP_NODShiLtJ_G0033736.1 mouse_genomes_project 8 101785584 101996900 + Fto protein_coding processed_transcript MGP_NODShiLtJ_T0011597.1 MGP_NODShiLtJ_G0009730.1 mouse_genomes_project 8 1144269 1144522 - Gm23888 misc_RNA misc_RNA MGP_NODShiLtJ_T0009009.1 MGP_NODShiLtJ_G0007238.1 mouse_genomes_project 8 34610116 34616512 + Gm9951 lincRNA lincRNA MGP_NODShiLtJ_T0009010.1 MGP_NODShiLtJ_G0007238.1 mouse_genomes_project 8 34615287 34617715 + Gm9951 lincRNA lincRNA MGP_NODShiLtJ_T0090546.1 MGP_NODShiLtJ_G0034076.1 mouse_genomes_project 8 139479233 139492297 - MGP_NODShiLtJ_P0090546 Agt protein_coding protein_coding MGP_NODShiLtJ_T0087927.1 MGP_NODShiLtJ_G0033229.1 mouse_genomes_project 8 19960691 19962530 - MGP_NODShiLtJ_P0087927 Gm15056 protein_coding protein_coding MGP_NODShiLtJ_T0087928.1 MGP_NODShiLtJ_G0033229.1 mouse_genomes_project 8 19960691 19962059 - MGP_NODShiLtJ_P0087928 Gm15056 protein_coding protein_coding MGP_NODShiLtJ_T0008989.1 MGP_NODShiLtJ_G0007224.1 mouse_genomes_project 8 10621273 10621675 + Gm29175 lincRNA lincRNA MGP_NODShiLtJ_T0090032.1 MGP_NODShiLtJ_G0033928.1 mouse_genomes_project 8 124193543 124296191 + MGP_NODShiLtJ_P0090032 Vac14 protein_coding protein_coding MGP_NODShiLtJ_T0098093.1 MGP_NODShiLtJ_G0036505.1 mouse_genomes_project 8 47193904 47194011 + Gm26089 rRNA rRNA MGP_NODShiLtJ_T0009041.1 MGP_NODShiLtJ_G0007266.1 mouse_genomes_project 8 93946178 93951948 - Gm26887 lincRNA lincRNA MGP_NODShiLtJ_T0088835.1 MGP_NODShiLtJ_G0033517.1 mouse_genomes_project 8 78794853 78852070 + MGP_NODShiLtJ_P0088835 Ell protein_coding protein_coding MGP_NODShiLtJ_T0088839.1 MGP_NODShiLtJ_G0033521.1 mouse_genomes_project 8 78889033 78891736 - MGP_NODShiLtJ_P0088839 Gdf15 protein_coding protein_coding MGP_NODShiLtJ_T0088840.1 MGP_NODShiLtJ_G0033521.1 mouse_genomes_project 8 78889034 78892097 - MGP_NODShiLtJ_P0088840 Gdf15 protein_coding protein_coding MGP_NODShiLtJ_T0087839.1 MGP_NODShiLtJ_G0033191.1 mouse_genomes_project 8 12312405 12315901 - MGP_NODShiLtJ_P0087839 protein_coding protein_coding MGP_NODShiLtJ_T0015859.1 MGP_NODShiLtJ_G0013967.1 mouse_genomes_project 8 67735245 67735618 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005282.1 MGP_NODShiLtJ_G0004473.1 mouse_genomes_project 8 15081363 15084089 + Gm16347 antisense antisense MGP_NODShiLtJ_T0005283.1 MGP_NODShiLtJ_G0004473.1 mouse_genomes_project 8 15081374 15085226 + Gm16347 antisense antisense MGP_NODShiLtJ_T0010914.1 MGP_NODShiLtJ_G0009047.1 mouse_genomes_project 8 135035594 135035685 - Gm22715 miRNA miRNA MGP_NODShiLtJ_T0010892.1 MGP_NODShiLtJ_G0009025.1 mouse_genomes_project 8 105020011 105020071 + Mir7072 miRNA miRNA MGP_NODShiLtJ_T0088875.1 MGP_NODShiLtJ_G0033540.1 mouse_genomes_project 8 79197740 79211977 + MGP_NODShiLtJ_P0088875 Map1s protein_coding protein_coding MGP_NODShiLtJ_T0090236.1 MGP_NODShiLtJ_G0033998.1 mouse_genomes_project 8 134417798 134433528 + MGP_NODShiLtJ_P0090236 Klhl36 protein_coding protein_coding MGP_NODShiLtJ_T0088307.1 MGP_NODShiLtJ_G0033368.1 mouse_genomes_project 8 43196378 43244990 - MGP_NODShiLtJ_P0088307 Asah1 protein_coding protein_coding MGP_NODShiLtJ_T0088308.1 MGP_NODShiLtJ_G0033368.1 mouse_genomes_project 8 43196840 43217033 - Asah1 protein_coding retained_intron MGP_NODShiLtJ_T0088309.1 MGP_NODShiLtJ_G0033368.1 mouse_genomes_project 8 43197506 43200040 - Asah1 protein_coding retained_intron MGP_NODShiLtJ_T0088310.1 MGP_NODShiLtJ_G0033368.1 mouse_genomes_project 8 43213175 43244852 - MGP_NODShiLtJ_P0088310 Asah1 protein_coding protein_coding MGP_NODShiLtJ_T0088311.1 MGP_NODShiLtJ_G0033368.1 mouse_genomes_project 8 43221003 43244990 - MGP_NODShiLtJ_P0088311 Asah1 protein_coding protein_coding MGP_NODShiLtJ_T0090527.1 MGP_NODShiLtJ_G0034070.1 mouse_genomes_project 8 138826309 138864558 - MGP_NODShiLtJ_P0090527 Abcb10 protein_coding protein_coding MGP_NODShiLtJ_T0090636.1 MGP_NODShiLtJ_G0034103.1 mouse_genomes_project 8 143575839 143736216 + MGP_NODShiLtJ_P0090636 Nrp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090414.1 MGP_NODShiLtJ_G0034037.1 mouse_genomes_project 8 137308675 137309000 + MGP_NODShiLtJ_P0090414 protein_coding protein_coding MGP_NODShiLtJ_T0100854.1 MGP_NODShiLtJ_G0039248.1 mouse_genomes_project 8 142045365 142045499 - Gm26397 snoRNA snoRNA MGP_NODShiLtJ_T0089159.1 MGP_NODShiLtJ_G0033633.1 mouse_genomes_project 8 92957152 92965507 + MGP_NODShiLtJ_P0089159 Ucp1 protein_coding protein_coding MGP_NODShiLtJ_T0089742.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117400244 117416336 - Nae1 protein_coding processed_transcript MGP_NODShiLtJ_T0089743.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117400244 117427793 - MGP_NODShiLtJ_P0089743 Nae1 protein_coding protein_coding MGP_NODShiLtJ_T0089744.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117400244 117427792 - MGP_NODShiLtJ_P0089744 Nae1 protein_coding protein_coding MGP_NODShiLtJ_T0089745.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117400250 117409320 - Nae1 protein_coding retained_intron MGP_NODShiLtJ_T0089746.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117400253 117410374 - Nae1 protein_coding retained_intron MGP_NODShiLtJ_T0089747.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117402409 117409380 - Nae1 protein_coding retained_intron MGP_NODShiLtJ_T0089748.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117409867 117421070 - Nae1 protein_coding retained_intron MGP_NODShiLtJ_T0089749.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117412116 117416368 - Nae1 protein_coding retained_intron MGP_NODShiLtJ_T0089750.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117416059 117427744 - Nae1 protein_coding retained_intron MGP_NODShiLtJ_T0089751.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117416488 117420489 - Nae1 protein_coding retained_intron MGP_NODShiLtJ_T0089752.1 MGP_NODShiLtJ_G0033815.1 mouse_genomes_project 8 117421184 117427770 - Nae1 protein_coding retained_intron MGP_NODShiLtJ_T0087863.1 MGP_NODShiLtJ_G0033202.1 mouse_genomes_project 8 13278139 13280242 - MGP_NODShiLtJ_P0087863 protein_coding protein_coding MGP_NODShiLtJ_T0002297.1 MGP_NODShiLtJ_G0002207.1 mouse_genomes_project 8 138217606 138218259 - TEC TEC MGP_NODShiLtJ_T0090229.1 MGP_NODShiLtJ_G0033993.1 mouse_genomes_project 8 134139317 134150801 - MGP_NODShiLtJ_P0090229 Kcng4 protein_coding protein_coding MGP_NODShiLtJ_T0090230.1 MGP_NODShiLtJ_G0033993.1 mouse_genomes_project 8 134139317 134151135 - MGP_NODShiLtJ_P0090230 Kcng4 protein_coding protein_coding MGP_NODShiLtJ_T0002280.1 MGP_NODShiLtJ_G0002191.1 mouse_genomes_project 8 13589434 13593534 - TEC TEC MGP_NODShiLtJ_T0088400.1 MGP_NODShiLtJ_G0033393.1 mouse_genomes_project 8 49083439 49086061 - MGP_NODShiLtJ_P0088400 Helt protein_coding protein_coding MGP_NODShiLtJ_T0089733.1 MGP_NODShiLtJ_G0033809.1 mouse_genomes_project 8 117193506 117193727 + MGP_NODShiLtJ_P0089733 Gm11020 protein_coding protein_coding MGP_NODShiLtJ_T0090541.1 MGP_NODShiLtJ_G0034075.1 mouse_genomes_project 8 139443818 139475115 + MGP_NODShiLtJ_P0090541 Cog2 protein_coding protein_coding MGP_NODShiLtJ_T0090542.1 MGP_NODShiLtJ_G0034075.1 mouse_genomes_project 8 139443855 139453032 + MGP_NODShiLtJ_P0090542 Cog2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090543.1 MGP_NODShiLtJ_G0034075.1 mouse_genomes_project 8 139443856 139468893 + Cog2 protein_coding retained_intron MGP_NODShiLtJ_T0090544.1 MGP_NODShiLtJ_G0034075.1 mouse_genomes_project 8 139443870 139453004 + MGP_NODShiLtJ_P0090544 Cog2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090545.1 MGP_NODShiLtJ_G0034075.1 mouse_genomes_project 8 139458309 139467512 + Cog2 protein_coding retained_intron MGP_NODShiLtJ_T0088880.1 MGP_NODShiLtJ_G0033545.1 mouse_genomes_project 8 79443903 79481351 + MGP_NODShiLtJ_P0088880 protein_coding protein_coding MGP_NODShiLtJ_T0015847.1 MGP_NODShiLtJ_G0013955.1 mouse_genomes_project 8 35807034 35807567 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089418.1 MGP_NODShiLtJ_G0033706.1 mouse_genomes_project 8 95155309 95198422 - MGP_NODShiLtJ_P0089418 Mylk3 protein_coding protein_coding MGP_NODShiLtJ_T0089419.1 MGP_NODShiLtJ_G0033706.1 mouse_genomes_project 8 95155453 95217730 - MGP_NODShiLtJ_P0089419 Mylk3 protein_coding protein_coding MGP_NODShiLtJ_T0089420.1 MGP_NODShiLtJ_G0033706.1 mouse_genomes_project 8 95158060 95198445 - MGP_NODShiLtJ_P0089420 Mylk3 protein_coding protein_coding MGP_NODShiLtJ_T0089421.1 MGP_NODShiLtJ_G0033706.1 mouse_genomes_project 8 95191433 95223085 - MGP_NODShiLtJ_P0089421 Mylk3 protein_coding protein_coding MGP_NODShiLtJ_T0089422.1 MGP_NODShiLtJ_G0033706.1 mouse_genomes_project 8 95192608 95217786 - Mylk3 protein_coding retained_intron MGP_NODShiLtJ_T0097835.1 MGP_NODShiLtJ_G0036247.1 mouse_genomes_project 8 84123080 84123660 + pseudogene pseudogene MGP_NODShiLtJ_T0088476.1 MGP_NODShiLtJ_G0033417.1 mouse_genomes_project 8 59490150 59530463 + MGP_NODShiLtJ_P0088476 Asb5 protein_coding protein_coding MGP_NODShiLtJ_T0090120.1 MGP_NODShiLtJ_G0033948.1 mouse_genomes_project 8 125423537 125428758 - MGP_NODShiLtJ_P0090120 Ctrb1 protein_coding protein_coding MGP_NODShiLtJ_T0090145.1 MGP_NODShiLtJ_G0033961.1 mouse_genomes_project 8 127654526 127831633 - MGP_NODShiLtJ_P0090145 Adamts18 protein_coding protein_coding MGP_NODShiLtJ_T0088712.1 MGP_NODShiLtJ_G0033489.1 mouse_genomes_project 8 78094453 78095788 + MGP_NODShiLtJ_P0088712 Tssk6 protein_coding protein_coding MGP_NODShiLtJ_T0090526.1 MGP_NODShiLtJ_G0034069.1 mouse_genomes_project 8 138770162 138823116 - MGP_NODShiLtJ_P0090526 Nup133 protein_coding protein_coding MGP_NODShiLtJ_T0090524.1 MGP_NODShiLtJ_G0034067.1 mouse_genomes_project 8 138723412 138723855 + MGP_NODShiLtJ_P0090524 protein_coding protein_coding MGP_NODShiLtJ_T0088804.1 MGP_NODShiLtJ_G0033512.1 mouse_genomes_project 8 78748736 78759632 + MGP_NODShiLtJ_P0088804 Crlf1 protein_coding protein_coding MGP_NODShiLtJ_T0088805.1 MGP_NODShiLtJ_G0033512.1 mouse_genomes_project 8 78748939 78756480 + MGP_NODShiLtJ_P0088805 Crlf1 protein_coding protein_coding MGP_NODShiLtJ_T0088806.1 MGP_NODShiLtJ_G0033512.1 mouse_genomes_project 8 78756682 78759581 + MGP_NODShiLtJ_P0088806 Crlf1 protein_coding protein_coding MGP_NODShiLtJ_T0089728.1 MGP_NODShiLtJ_G0033806.1 mouse_genomes_project 8 117091050 117100118 + MGP_NODShiLtJ_P0089728 protein_coding protein_coding MGP_NODShiLtJ_T0010857.1 MGP_NODShiLtJ_G0008990.1 mouse_genomes_project 8 50495080 50495160 + Gm27409 miRNA miRNA MGP_NODShiLtJ_T0087614.1 MGP_NODShiLtJ_G0033123.1 mouse_genomes_project 8 694395 704885 - MGP_NODShiLtJ_P0087614 Clec4g protein_coding protein_coding MGP_NODShiLtJ_T0087615.1 MGP_NODShiLtJ_G0033123.1 mouse_genomes_project 8 703395 707983 - MGP_NODShiLtJ_P0087615 Clec4g protein_coding protein_coding MGP_NODShiLtJ_T0087616.1 MGP_NODShiLtJ_G0033123.1 mouse_genomes_project 8 704545 705985 - Clec4g protein_coding retained_intron MGP_NODShiLtJ_T0090586.1 MGP_NODShiLtJ_G0034090.1 mouse_genomes_project 8 140432384 140514617 - MGP_NODShiLtJ_P0090586 Sipa1l2 protein_coding protein_coding MGP_NODShiLtJ_T0089721.1 MGP_NODShiLtJ_G0033802.1 mouse_genomes_project 8 115213015 115226508 - MGP_NODShiLtJ_P0089721 protein_coding protein_coding MGP_NODShiLtJ_T0089622.1 MGP_NODShiLtJ_G0033769.1 mouse_genomes_project 8 105188456 105196114 + MGP_NODShiLtJ_P0089622 Arl2bp protein_coding protein_coding MGP_NODShiLtJ_T0089623.1 MGP_NODShiLtJ_G0033769.1 mouse_genomes_project 8 105188927 105196114 + MGP_NODShiLtJ_P0089623 Arl2bp protein_coding protein_coding MGP_NODShiLtJ_T0090018.1 MGP_NODShiLtJ_G0033919.1 mouse_genomes_project 8 123472294 123486733 - MGP_NODShiLtJ_P0090018 Marveld3 protein_coding protein_coding MGP_NODShiLtJ_T0090019.1 MGP_NODShiLtJ_G0033919.1 mouse_genomes_project 8 123477283 123486768 - MGP_NODShiLtJ_P0090019 Marveld3 protein_coding protein_coding MGP_NODShiLtJ_T0090020.1 MGP_NODShiLtJ_G0033919.1 mouse_genomes_project 8 123484195 123486618 - Marveld3 protein_coding retained_intron MGP_NODShiLtJ_T0010922.1 MGP_NODShiLtJ_G0009055.1 mouse_genomes_project 8 140043791 140043849 + Gm22197 miRNA miRNA MGP_NODShiLtJ_T0088845.1 MGP_NODShiLtJ_G0033524.1 mouse_genomes_project 8 78966765 78969644 + MGP_NODShiLtJ_P0088845 Jund protein_coding protein_coding MGP_NODShiLtJ_T0088016.1 MGP_NODShiLtJ_G0033271.1 mouse_genomes_project 8 22436139 22449514 - MGP_NODShiLtJ_P0088016 Gins4 protein_coding protein_coding MGP_NODShiLtJ_T0088109.1 MGP_NODShiLtJ_G0033296.1 mouse_genomes_project 8 25273489 25279711 + MGP_NODShiLtJ_P0088109 Star protein_coding protein_coding MGP_NODShiLtJ_T0089140.1 MGP_NODShiLtJ_G0033626.1 mouse_genomes_project 8 90353402 90389086 - MGP_NODShiLtJ_P0089140 Usp38 protein_coding protein_coding MGP_NODShiLtJ_T0090295.1 MGP_NODShiLtJ_G0034010.1 mouse_genomes_project 8 135361622 135382973 + MGP_NODShiLtJ_P0090295 Irf8 protein_coding protein_coding MGP_NODShiLtJ_T0090296.1 MGP_NODShiLtJ_G0034010.1 mouse_genomes_project 8 135361623 135368499 + Irf8 protein_coding retained_intron MGP_NODShiLtJ_T0090297.1 MGP_NODShiLtJ_G0034010.1 mouse_genomes_project 8 135361649 135379757 + MGP_NODShiLtJ_P0090297 Irf8 protein_coding protein_coding MGP_NODShiLtJ_T0090298.1 MGP_NODShiLtJ_G0034010.1 mouse_genomes_project 8 135363903 135381860 + MGP_NODShiLtJ_P0090298 Irf8 protein_coding protein_coding MGP_NODShiLtJ_T0090300.1 MGP_NODShiLtJ_G0034010.1 mouse_genomes_project 8 135371758 135380012 + Irf8 protein_coding retained_intron MGP_NODShiLtJ_T0090301.1 MGP_NODShiLtJ_G0034010.1 mouse_genomes_project 8 135378487 135379990 + Irf8 protein_coding processed_transcript MGP_NODShiLtJ_T0089494.1 MGP_NODShiLtJ_G0033725.1 mouse_genomes_project 8 98588954 98669143 + MGP_NODShiLtJ_P0089494 Nkd1 protein_coding protein_coding MGP_NODShiLtJ_T0089495.1 MGP_NODShiLtJ_G0033725.1 mouse_genomes_project 8 98595266 98669143 + MGP_NODShiLtJ_P0089495 Nkd1 protein_coding protein_coding MGP_NODShiLtJ_T0089662.1 MGP_NODShiLtJ_G0033783.1 mouse_genomes_project 8 105635814 105654512 + MGP_NODShiLtJ_P0089662 Katnb1 protein_coding protein_coding MGP_NODShiLtJ_T0088275.1 MGP_NODShiLtJ_G0033361.1 mouse_genomes_project 8 42327541 42413655 - MGP_NODShiLtJ_P0088275 Mtmr7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088276.1 MGP_NODShiLtJ_G0033361.1 mouse_genomes_project 8 42327547 42413642 - MGP_NODShiLtJ_P0088276 Mtmr7 protein_coding protein_coding MGP_NODShiLtJ_T0088277.1 MGP_NODShiLtJ_G0033361.1 mouse_genomes_project 8 42330325 42367291 - MGP_NODShiLtJ_P0088277 Mtmr7 protein_coding protein_coding MGP_NODShiLtJ_T0088278.1 MGP_NODShiLtJ_G0033361.1 mouse_genomes_project 8 42331132 42413658 - MGP_NODShiLtJ_P0088278 Mtmr7 protein_coding protein_coding MGP_NODShiLtJ_T0088279.1 MGP_NODShiLtJ_G0033361.1 mouse_genomes_project 8 42342770 42413625 - MGP_NODShiLtJ_P0088279 Mtmr7 protein_coding protein_coding MGP_NODShiLtJ_T0088280.1 MGP_NODShiLtJ_G0033361.1 mouse_genomes_project 8 42384831 42413663 - Mtmr7 protein_coding processed_transcript MGP_NODShiLtJ_T0090500.1 MGP_NODShiLtJ_G0034060.1 mouse_genomes_project 8 138258138 138281255 + MGP_NODShiLtJ_P0090500 Def8 protein_coding protein_coding MGP_NODShiLtJ_T0090501.1 MGP_NODShiLtJ_G0034060.1 mouse_genomes_project 8 138258138 138281255 + MGP_NODShiLtJ_P0090501 Def8 protein_coding protein_coding MGP_NODShiLtJ_T0090502.1 MGP_NODShiLtJ_G0034060.1 mouse_genomes_project 8 138258138 138277626 + MGP_NODShiLtJ_P0090502 Def8 protein_coding protein_coding MGP_NODShiLtJ_T0090503.1 MGP_NODShiLtJ_G0034060.1 mouse_genomes_project 8 138258148 138269955 + MGP_NODShiLtJ_P0090503 Def8 protein_coding protein_coding MGP_NODShiLtJ_T0090504.1 MGP_NODShiLtJ_G0034060.1 mouse_genomes_project 8 138258157 138281255 + MGP_NODShiLtJ_P0090504 Def8 protein_coding protein_coding MGP_NODShiLtJ_T0090505.1 MGP_NODShiLtJ_G0034060.1 mouse_genomes_project 8 138258160 138269891 + MGP_NODShiLtJ_P0090505 Def8 protein_coding protein_coding MGP_NODShiLtJ_T0090506.1 MGP_NODShiLtJ_G0034060.1 mouse_genomes_project 8 138258164 138272659 + MGP_NODShiLtJ_P0090506 Def8 protein_coding protein_coding MGP_NODShiLtJ_T0090507.1 MGP_NODShiLtJ_G0034060.1 mouse_genomes_project 8 138258460 138281247 + MGP_NODShiLtJ_P0090507 Def8 protein_coding protein_coding MGP_NODShiLtJ_T0102217.1 MGP_NODShiLtJ_G0040383.1 mouse_genomes_project 8 211 2301 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0088058.1 MGP_NODShiLtJ_G0033283.1 mouse_genomes_project 8 24328237 24396520 - MGP_NODShiLtJ_P0088058 Adam9 protein_coding protein_coding MGP_NODShiLtJ_T0087578.1 MGP_NODShiLtJ_G0033114.1 mouse_genomes_project 8 561284 590147 + MGP_NODShiLtJ_P0087578 Camsap3 protein_coding protein_coding MGP_NODShiLtJ_T0087579.1 MGP_NODShiLtJ_G0033114.1 mouse_genomes_project 8 561284 590147 + MGP_NODShiLtJ_P0087579 Camsap3 protein_coding protein_coding MGP_NODShiLtJ_T0087580.1 MGP_NODShiLtJ_G0033114.1 mouse_genomes_project 8 561646 590122 + MGP_NODShiLtJ_P0087580 Camsap3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0015865.1 MGP_NODShiLtJ_G0013973.1 mouse_genomes_project 8 80879673 80880076 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088326.1 MGP_NODShiLtJ_G0033377.1 mouse_genomes_project 8 47704580 47723559 + MGP_NODShiLtJ_P0088326 Mtnr1a protein_coding protein_coding MGP_NODShiLtJ_T0088327.1 MGP_NODShiLtJ_G0033377.1 mouse_genomes_project 8 47704817 47722559 + MGP_NODShiLtJ_P0088327 Mtnr1a protein_coding protein_coding MGP_NODShiLtJ_T0088672.1 MGP_NODShiLtJ_G0033476.1 mouse_genomes_project 8 77799105 77815974 - MGP_NODShiLtJ_P0088672 Zfp868 protein_coding protein_coding MGP_NODShiLtJ_T0088673.1 MGP_NODShiLtJ_G0033476.1 mouse_genomes_project 8 77799662 77807599 - MGP_NODShiLtJ_P0088673 Zfp868 protein_coding protein_coding MGP_NODShiLtJ_T0088674.1 MGP_NODShiLtJ_G0033476.1 mouse_genomes_project 8 77800668 77802310 - Zfp868 protein_coding retained_intron MGP_NODShiLtJ_T0088675.1 MGP_NODShiLtJ_G0033476.1 mouse_genomes_project 8 77807115 77815971 - Zfp868 protein_coding retained_intron MGP_NODShiLtJ_T0088168.1 MGP_NODShiLtJ_G0033323.1 mouse_genomes_project 8 32096789 32100677 - MGP_NODShiLtJ_P0088168 protein_coding protein_coding MGP_NODShiLtJ_T0009101.1 MGP_NODShiLtJ_G0007305.1 mouse_genomes_project 8 134784010 134810176 - A330074K22Rik lincRNA lincRNA MGP_NODShiLtJ_T0090155.1 MGP_NODShiLtJ_G0033964.1 mouse_genomes_project 8 128448250 128458266 + MGP_NODShiLtJ_P0090155 Clec3a protein_coding protein_coding MGP_NODShiLtJ_T0087711.1 MGP_NODShiLtJ_G0033157.1 mouse_genomes_project 8 9747698 9766183 + MGP_NODShiLtJ_P0087711 Carkd protein_coding protein_coding MGP_NODShiLtJ_T0087712.1 MGP_NODShiLtJ_G0033157.1 mouse_genomes_project 8 9747759 9767856 + MGP_NODShiLtJ_P0087712 Carkd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087713.1 MGP_NODShiLtJ_G0033157.1 mouse_genomes_project 8 9747760 9766183 + MGP_NODShiLtJ_P0087713 Carkd protein_coding protein_coding MGP_NODShiLtJ_T0087714.1 MGP_NODShiLtJ_G0033157.1 mouse_genomes_project 8 9747785 9757263 + Carkd protein_coding retained_intron MGP_NODShiLtJ_T0087715.1 MGP_NODShiLtJ_G0033157.1 mouse_genomes_project 8 9747825 9761483 + Carkd protein_coding retained_intron MGP_NODShiLtJ_T0087716.1 MGP_NODShiLtJ_G0033157.1 mouse_genomes_project 8 9747845 9765941 + MGP_NODShiLtJ_P0087716 Carkd protein_coding protein_coding MGP_NODShiLtJ_T0087717.1 MGP_NODShiLtJ_G0033157.1 mouse_genomes_project 8 9761208 9766163 + Carkd protein_coding retained_intron MGP_NODShiLtJ_T0089478.1 MGP_NODShiLtJ_G0033722.1 mouse_genomes_project 8 98242853 98309673 + MGP_NODShiLtJ_P0089478 Papd5 protein_coding protein_coding MGP_NODShiLtJ_T0089479.1 MGP_NODShiLtJ_G0033722.1 mouse_genomes_project 8 98242853 98309679 + MGP_NODShiLtJ_P0089479 Papd5 protein_coding protein_coding MGP_NODShiLtJ_T0089480.1 MGP_NODShiLtJ_G0033722.1 mouse_genomes_project 8 98242854 98309679 + MGP_NODShiLtJ_P0089480 Papd5 protein_coding protein_coding MGP_NODShiLtJ_T0089481.1 MGP_NODShiLtJ_G0033722.1 mouse_genomes_project 8 98294431 98299186 + Papd5 protein_coding retained_intron MGP_NODShiLtJ_T0089482.1 MGP_NODShiLtJ_G0033722.1 mouse_genomes_project 8 98301936 98307368 + MGP_NODShiLtJ_P0089482 Papd5 protein_coding protein_coding MGP_NODShiLtJ_T0005307.1 MGP_NODShiLtJ_G0004493.1 mouse_genomes_project 8 75947113 75969737 + Gm15991 antisense antisense MGP_NODShiLtJ_T0100852.1 MGP_NODShiLtJ_G0039246.1 mouse_genomes_project 8 137867754 137867840 + Snord68 snoRNA snoRNA MGP_NODShiLtJ_T0015876.1 MGP_NODShiLtJ_G0013984.1 mouse_genomes_project 8 91270520 91270871 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087739.1 MGP_NODShiLtJ_G0033167.1 mouse_genomes_project 8 10938217 10969233 + MGP_NODShiLtJ_P0087739 Spaca7 protein_coding protein_coding MGP_NODShiLtJ_T0015819.1 MGP_NODShiLtJ_G0013927.1 mouse_genomes_project 8 1005951 1010876 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090451.1 MGP_NODShiLtJ_G0034047.1 mouse_genomes_project 8 137908690 137926260 - MGP_NODShiLtJ_P0090451 Sult5a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090452.1 MGP_NODShiLtJ_G0034047.1 mouse_genomes_project 8 137908697 137925431 - MGP_NODShiLtJ_P0090452 Sult5a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090453.1 MGP_NODShiLtJ_G0034047.1 mouse_genomes_project 8 137912656 137925418 - MGP_NODShiLtJ_P0090453 Sult5a1 protein_coding protein_coding MGP_NODShiLtJ_T0090454.1 MGP_NODShiLtJ_G0034047.1 mouse_genomes_project 8 137915330 137925389 - MGP_NODShiLtJ_P0090454 Sult5a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090455.1 MGP_NODShiLtJ_G0034047.1 mouse_genomes_project 8 137924164 137925435 - Sult5a1 protein_coding retained_intron MGP_NODShiLtJ_T0090456.1 MGP_NODShiLtJ_G0034047.1 mouse_genomes_project 8 137924431 137925476 - Sult5a1 protein_coding retained_intron MGP_NODShiLtJ_T0089168.1 MGP_NODShiLtJ_G0033636.1 mouse_genomes_project 8 93078921 93124883 + MGP_NODShiLtJ_P0089168 Clgn protein_coding protein_coding MGP_NODShiLtJ_T0089169.1 MGP_NODShiLtJ_G0033636.1 mouse_genomes_project 8 93078932 93123162 + MGP_NODShiLtJ_P0089169 Clgn protein_coding protein_coding MGP_NODShiLtJ_T0090517.1 MGP_NODShiLtJ_G0034063.1 mouse_genomes_project 8 138357292 138375347 + MGP_NODShiLtJ_P0090517 Gas8 protein_coding protein_coding MGP_NODShiLtJ_T0087925.1 MGP_NODShiLtJ_G0033227.1 mouse_genomes_project 8 18547447 18550098 + MGP_NODShiLtJ_P0087925 Defb7 protein_coding protein_coding MGP_NODShiLtJ_T0002282.1 MGP_NODShiLtJ_G0002193.1 mouse_genomes_project 8 46777430 46778258 - TEC TEC MGP_NODShiLtJ_T0089238.1 MGP_NODShiLtJ_G0033661.1 mouse_genomes_project 8 93881761 93898156 - MGP_NODShiLtJ_P0089238 Cc2d1a protein_coding protein_coding MGP_NODShiLtJ_T0089239.1 MGP_NODShiLtJ_G0033661.1 mouse_genomes_project 8 93881761 93898227 - MGP_NODShiLtJ_P0089239 Cc2d1a protein_coding protein_coding MGP_NODShiLtJ_T0089240.1 MGP_NODShiLtJ_G0033661.1 mouse_genomes_project 8 93881770 93885769 - Cc2d1a protein_coding retained_intron MGP_NODShiLtJ_T0089241.1 MGP_NODShiLtJ_G0033661.1 mouse_genomes_project 8 93896745 93898188 - Cc2d1a protein_coding processed_transcript MGP_NODShiLtJ_T0099556.1 MGP_NODShiLtJ_G0037950.1 mouse_genomes_project 8 88221601 88221708 - Gm22044 snRNA snRNA MGP_NODShiLtJ_T0011609.1 MGP_NODShiLtJ_G0009742.1 mouse_genomes_project 8 72903767 72903910 + Gm25403 misc_RNA misc_RNA MGP_NODShiLtJ_T0088446.1 MGP_NODShiLtJ_G0033407.1 mouse_genomes_project 8 50770907 50773730 + MGP_NODShiLtJ_P0088446 protein_coding protein_coding MGP_NODShiLtJ_T0089508.1 MGP_NODShiLtJ_G0033732.1 mouse_genomes_project 8 101101420 101342517 + MGP_NODShiLtJ_P0089508 Chd9 protein_coding protein_coding MGP_NODShiLtJ_T0089509.1 MGP_NODShiLtJ_G0033732.1 mouse_genomes_project 8 101184957 101342525 + MGP_NODShiLtJ_P0089509 Chd9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010913.1 MGP_NODShiLtJ_G0009046.1 mouse_genomes_project 8 131910785 131910840 - Gm27361 miRNA miRNA MGP_NODShiLtJ_T0009038.1 MGP_NODShiLtJ_G0007264.1 mouse_genomes_project 8 91115468 91116665 - 4930579O11Rik lincRNA lincRNA MGP_NODShiLtJ_T0009039.1 MGP_NODShiLtJ_G0007264.1 mouse_genomes_project 8 91115496 91116711 - 4930579O11Rik lincRNA lincRNA MGP_NODShiLtJ_T0009086.1 MGP_NODShiLtJ_G0007294.1 mouse_genomes_project 8 110920137 110928738 + lincRNA lincRNA MGP_NODShiLtJ_T0009087.1 MGP_NODShiLtJ_G0007294.1 mouse_genomes_project 8 110920169 111325141 + lincRNA lincRNA MGP_NODShiLtJ_T0089231.1 MGP_NODShiLtJ_G0033656.1 mouse_genomes_project 8 93806612 93808189 - MGP_NODShiLtJ_P0089231 Gm10643 protein_coding protein_coding MGP_NODShiLtJ_T0010900.1 MGP_NODShiLtJ_G0009033.1 mouse_genomes_project 8 119045652 119045715 - Mir7074 miRNA miRNA MGP_NODShiLtJ_T0010837.1 MGP_NODShiLtJ_G0008970.1 mouse_genomes_project 8 3001584 3001653 + Gm22565 miRNA miRNA MGP_NODShiLtJ_T0008984.1 MGP_NODShiLtJ_G0007220.1 mouse_genomes_project 8 9125595 9129626 - 3930402G23Rik lincRNA lincRNA MGP_NODShiLtJ_T0090223.1 MGP_NODShiLtJ_G0033991.1 mouse_genomes_project 8 134110752 134120738 - MGP_NODShiLtJ_P0090223 Taf1c protein_coding protein_coding MGP_NODShiLtJ_T0090224.1 MGP_NODShiLtJ_G0033991.1 mouse_genomes_project 8 134110752 134120738 - MGP_NODShiLtJ_P0090224 Taf1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090225.1 MGP_NODShiLtJ_G0033991.1 mouse_genomes_project 8 134111596 134112623 - Taf1c protein_coding processed_transcript MGP_NODShiLtJ_T0090226.1 MGP_NODShiLtJ_G0033991.1 mouse_genomes_project 8 134112164 134113491 - Taf1c protein_coding retained_intron MGP_NODShiLtJ_T0090227.1 MGP_NODShiLtJ_G0033991.1 mouse_genomes_project 8 134112405 134114356 - Taf1c protein_coding processed_transcript MGP_NODShiLtJ_T0088116.1 MGP_NODShiLtJ_G0033298.1 mouse_genomes_project 8 25320451 25421650 + MGP_NODShiLtJ_P0088116 Kcnu1 protein_coding protein_coding MGP_NODShiLtJ_T0088117.1 MGP_NODShiLtJ_G0033298.1 mouse_genomes_project 8 25391017 25421651 + MGP_NODShiLtJ_P0088117 Kcnu1 protein_coding protein_coding MGP_NODShiLtJ_T0088118.1 MGP_NODShiLtJ_G0033298.1 mouse_genomes_project 8 25391029 25402037 + MGP_NODShiLtJ_P0088118 Kcnu1 protein_coding protein_coding MGP_NODShiLtJ_T0090495.1 MGP_NODShiLtJ_G0034056.1 mouse_genomes_project 8 138139923 138178040 + MGP_NODShiLtJ_P0090495 Spire2 protein_coding protein_coding MGP_NODShiLtJ_T0090033.1 MGP_NODShiLtJ_G0033929.1 mouse_genomes_project 8 124297270 124318062 + MGP_NODShiLtJ_P0090033 Mtss1l protein_coding protein_coding MGP_NODShiLtJ_T0090034.1 MGP_NODShiLtJ_G0033929.1 mouse_genomes_project 8 124297516 124315739 + MGP_NODShiLtJ_P0090034 Mtss1l protein_coding protein_coding MGP_NODShiLtJ_T0090035.1 MGP_NODShiLtJ_G0033929.1 mouse_genomes_project 8 124302074 124308672 + Mtss1l protein_coding processed_transcript MGP_NODShiLtJ_T0090036.1 MGP_NODShiLtJ_G0033929.1 mouse_genomes_project 8 124303003 124314315 + MGP_NODShiLtJ_P0090036 Mtss1l protein_coding protein_coding MGP_NODShiLtJ_T0090037.1 MGP_NODShiLtJ_G0033929.1 mouse_genomes_project 8 124303014 124314735 + MGP_NODShiLtJ_P0090037 Mtss1l protein_coding protein_coding MGP_NODShiLtJ_T0090038.1 MGP_NODShiLtJ_G0033929.1 mouse_genomes_project 8 124313778 124315043 + Mtss1l protein_coding retained_intron MGP_NODShiLtJ_T0089088.1 MGP_NODShiLtJ_G0033607.1 mouse_genomes_project 8 86626822 86662159 + MGP_NODShiLtJ_P0089088 Prmt9 protein_coding protein_coding MGP_NODShiLtJ_T0089089.1 MGP_NODShiLtJ_G0033607.1 mouse_genomes_project 8 86626832 86643310 + Prmt9 protein_coding retained_intron MGP_NODShiLtJ_T0089090.1 MGP_NODShiLtJ_G0033607.1 mouse_genomes_project 8 86626835 86662159 + MGP_NODShiLtJ_P0089090 Prmt9 protein_coding protein_coding MGP_NODShiLtJ_T0089091.1 MGP_NODShiLtJ_G0033607.1 mouse_genomes_project 8 86642987 86644423 + Prmt9 protein_coding retained_intron MGP_NODShiLtJ_T0009094.1 MGP_NODShiLtJ_G0007300.1 mouse_genomes_project 8 119743889 119751531 + 1110028F18Rik lincRNA lincRNA MGP_NODShiLtJ_T0009004.1 MGP_NODShiLtJ_G0007235.1 mouse_genomes_project 8 32383954 32391832 + Gm26578 lincRNA lincRNA MGP_NODShiLtJ_T0088801.1 MGP_NODShiLtJ_G0033510.1 mouse_genomes_project 8 78697152 78732637 - MGP_NODShiLtJ_P0088801 Klhl26 protein_coding protein_coding MGP_NODShiLtJ_T0088802.1 MGP_NODShiLtJ_G0033510.1 mouse_genomes_project 8 78697152 78732637 - MGP_NODShiLtJ_P0088802 Klhl26 protein_coding protein_coding MGP_NODShiLtJ_T0002278.1 MGP_NODShiLtJ_G0002189.1 mouse_genomes_project 8 11665631 11666717 - TEC TEC MGP_NODShiLtJ_T0011617.1 MGP_NODShiLtJ_G0009750.1 mouse_genomes_project 8 124068722 124069013 + Gm22701 misc_RNA misc_RNA MGP_NODShiLtJ_T0088120.1 MGP_NODShiLtJ_G0033300.1 mouse_genomes_project 8 25471770 25487572 - MGP_NODShiLtJ_P0088120 Pomk protein_coding protein_coding MGP_NODShiLtJ_T0089977.1 MGP_NODShiLtJ_G0033904.1 mouse_genomes_project 8 120697432 120710008 - MGP_NODShiLtJ_P0089977 Nob1 protein_coding protein_coding MGP_NODShiLtJ_T0089978.1 MGP_NODShiLtJ_G0033904.1 mouse_genomes_project 8 120697438 120706515 - Nob1 protein_coding retained_intron MGP_NODShiLtJ_T0089979.1 MGP_NODShiLtJ_G0033904.1 mouse_genomes_project 8 120697438 120709994 - MGP_NODShiLtJ_P0089979 Nob1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089980.1 MGP_NODShiLtJ_G0033904.1 mouse_genomes_project 8 120701190 120709939 - Nob1 protein_coding retained_intron MGP_NODShiLtJ_T0089981.1 MGP_NODShiLtJ_G0033904.1 mouse_genomes_project 8 120702647 120710004 - Nob1 protein_coding retained_intron MGP_NODShiLtJ_T0089982.1 MGP_NODShiLtJ_G0033904.1 mouse_genomes_project 8 120703008 120707280 - Nob1 protein_coding processed_transcript MGP_NODShiLtJ_T0089983.1 MGP_NODShiLtJ_G0033904.1 mouse_genomes_project 8 120703106 120703619 - Nob1 protein_coding retained_intron MGP_NODShiLtJ_T0089984.1 MGP_NODShiLtJ_G0033904.1 mouse_genomes_project 8 120703302 120709979 - MGP_NODShiLtJ_P0089984 Nob1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098097.1 MGP_NODShiLtJ_G0036509.1 mouse_genomes_project 8 71584970 71585091 + Gm22586 rRNA rRNA MGP_NODShiLtJ_T0089269.1 MGP_NODShiLtJ_G0033670.1 mouse_genomes_project 8 94460192 94479645 - MGP_NODShiLtJ_P0089269 Nacc1 protein_coding protein_coding MGP_NODShiLtJ_T0089270.1 MGP_NODShiLtJ_G0033670.1 mouse_genomes_project 8 94461978 94467410 - MGP_NODShiLtJ_P0089270 Nacc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0099550.1 MGP_NODShiLtJ_G0037944.1 mouse_genomes_project 8 73227064 73227171 - Gm23515 snRNA snRNA MGP_NODShiLtJ_T0089177.1 MGP_NODShiLtJ_G0033641.1 mouse_genomes_project 8 93358437 93373245 + MGP_NODShiLtJ_P0089177 Gipc1 protein_coding protein_coding MGP_NODShiLtJ_T0088920.1 MGP_NODShiLtJ_G0033553.1 mouse_genomes_project 8 79728054 79735979 + MGP_NODShiLtJ_P0088920 Babam1 protein_coding protein_coding MGP_NODShiLtJ_T0010897.1 MGP_NODShiLtJ_G0009030.1 mouse_genomes_project 8 118337187 118337296 - Gm27320 miRNA miRNA MGP_NODShiLtJ_T0009114.1 MGP_NODShiLtJ_G0007316.1 mouse_genomes_project 8 136215891 136219858 + 1700030M09Rik lincRNA lincRNA MGP_NODShiLtJ_T0009115.1 MGP_NODShiLtJ_G0007316.1 mouse_genomes_project 8 136215897 136219168 + 1700030M09Rik lincRNA lincRNA MGP_NODShiLtJ_T0089323.1 MGP_NODShiLtJ_G0033680.1 mouse_genomes_project 8 94659441 94671515 + MGP_NODShiLtJ_P0089323 Farsa protein_coding protein_coding MGP_NODShiLtJ_T0089324.1 MGP_NODShiLtJ_G0033680.1 mouse_genomes_project 8 94659447 94671514 + Farsa protein_coding retained_intron MGP_NODShiLtJ_T0089325.1 MGP_NODShiLtJ_G0033680.1 mouse_genomes_project 8 94659461 94669280 + Farsa protein_coding retained_intron MGP_NODShiLtJ_T0089326.1 MGP_NODShiLtJ_G0033680.1 mouse_genomes_project 8 94659469 94671515 + MGP_NODShiLtJ_P0089326 Farsa protein_coding protein_coding MGP_NODShiLtJ_T0089327.1 MGP_NODShiLtJ_G0033680.1 mouse_genomes_project 8 94659472 94671514 + MGP_NODShiLtJ_P0089327 Farsa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089328.1 MGP_NODShiLtJ_G0033680.1 mouse_genomes_project 8 94669820 94671268 + Farsa protein_coding retained_intron MGP_NODShiLtJ_T0005338.1 MGP_NODShiLtJ_G0004519.1 mouse_genomes_project 8 129835331 129837563 + Gm15655 antisense antisense MGP_NODShiLtJ_T0090211.1 MGP_NODShiLtJ_G0033986.1 mouse_genomes_project 8 133943635 133970471 + MGP_NODShiLtJ_P0090211 Necab2 protein_coding protein_coding MGP_NODShiLtJ_T0090212.1 MGP_NODShiLtJ_G0033986.1 mouse_genomes_project 8 133943677 133970242 + Necab2 protein_coding processed_transcript MGP_NODShiLtJ_T0090213.1 MGP_NODShiLtJ_G0033986.1 mouse_genomes_project 8 133950260 133968776 + MGP_NODShiLtJ_P0090213 Necab2 protein_coding protein_coding MGP_NODShiLtJ_T0087749.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11133884 11249982 + MGP_NODShiLtJ_P0087749 Atp11a protein_coding protein_coding MGP_NODShiLtJ_T0087750.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11133886 11249982 + MGP_NODShiLtJ_P0087750 Atp11a protein_coding protein_coding MGP_NODShiLtJ_T0087751.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11133939 11240974 + MGP_NODShiLtJ_P0087751 Atp11a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087752.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11191237 11194686 + Atp11a protein_coding retained_intron MGP_NODShiLtJ_T0087753.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11202700 11208838 + Atp11a protein_coding retained_intron MGP_NODShiLtJ_T0087754.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11215464 11249921 + MGP_NODShiLtJ_P0087754 Atp11a protein_coding protein_coding MGP_NODShiLtJ_T0087755.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11228154 11238524 + MGP_NODShiLtJ_P0087755 Atp11a protein_coding protein_coding MGP_NODShiLtJ_T0087756.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11230140 11232024 + Atp11a protein_coding processed_transcript MGP_NODShiLtJ_T0087757.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11238213 11243459 + MGP_NODShiLtJ_P0087757 Atp11a protein_coding protein_coding MGP_NODShiLtJ_T0087758.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11239215 11243456 + MGP_NODShiLtJ_P0087758 Atp11a protein_coding protein_coding MGP_NODShiLtJ_T0087759.1 MGP_NODShiLtJ_G0033169.1 mouse_genomes_project 8 11242818 11246824 + Atp11a protein_coding retained_intron MGP_NODShiLtJ_T0005343.1 MGP_NODShiLtJ_G0004524.1 mouse_genomes_project 8 136591404 136603613 + BC048644 antisense antisense MGP_NODShiLtJ_T0005344.1 MGP_NODShiLtJ_G0004524.1 mouse_genomes_project 8 136591404 136593401 + BC048644 antisense antisense MGP_NODShiLtJ_T0087962.1 MGP_NODShiLtJ_G0033254.1 mouse_genomes_project 8 21316185 21348717 + MGP_NODShiLtJ_P0087962 Vps36 protein_coding protein_coding MGP_NODShiLtJ_T0087963.1 MGP_NODShiLtJ_G0033254.1 mouse_genomes_project 8 21316218 21331330 + Vps36 protein_coding processed_transcript MGP_NODShiLtJ_T0087964.1 MGP_NODShiLtJ_G0033254.1 mouse_genomes_project 8 21344866 21346506 + Vps36 protein_coding retained_intron MGP_NODShiLtJ_T0011601.1 MGP_NODShiLtJ_G0009734.1 mouse_genomes_project 8 9983765 9984009 - Gm27854 misc_RNA misc_RNA MGP_NODShiLtJ_T0010838.1 MGP_NODShiLtJ_G0008971.1 mouse_genomes_project 8 6718713 6718783 - Mir7654 miRNA miRNA MGP_NODShiLtJ_T0087727.1 MGP_NODShiLtJ_G0033162.1 mouse_genomes_project 8 10017850 10117706 + MGP_NODShiLtJ_P0087727 Arhgef7 protein_coding protein_coding MGP_NODShiLtJ_T0087728.1 MGP_NODShiLtJ_G0033162.1 mouse_genomes_project 8 10017997 10119364 + MGP_NODShiLtJ_P0087728 Arhgef7 protein_coding protein_coding MGP_NODShiLtJ_T0087729.1 MGP_NODShiLtJ_G0033162.1 mouse_genomes_project 8 10075244 10129864 + MGP_NODShiLtJ_P0087729 Arhgef7 protein_coding protein_coding MGP_NODShiLtJ_T0087730.1 MGP_NODShiLtJ_G0033162.1 mouse_genomes_project 8 10107015 10110990 + Arhgef7 protein_coding processed_transcript MGP_NODShiLtJ_T0087731.1 MGP_NODShiLtJ_G0033162.1 mouse_genomes_project 8 10124882 10126945 + Arhgef7 protein_coding processed_transcript MGP_NODShiLtJ_T0088247.1 MGP_NODShiLtJ_G0033353.1 mouse_genomes_project 8 38471170 40143975 - MGP_NODShiLtJ_P0088247 Sgcz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088248.1 MGP_NODShiLtJ_G0033353.1 mouse_genomes_project 8 38471426 40143975 - MGP_NODShiLtJ_P0088248 Sgcz protein_coding protein_coding MGP_NODShiLtJ_T0099564.1 MGP_NODShiLtJ_G0037958.1 mouse_genomes_project 8 109920769 109920895 - Gm23494 snRNA snRNA MGP_NODShiLtJ_T0088084.1 MGP_NODShiLtJ_G0033289.1 mouse_genomes_project 8 25008139 25030117 - MGP_NODShiLtJ_P0088084 Letm2 protein_coding protein_coding MGP_NODShiLtJ_T0100833.1 MGP_NODShiLtJ_G0039227.1 mouse_genomes_project 8 96162457 96162581 + Gm23904 snoRNA snoRNA MGP_NODShiLtJ_T0090269.1 MGP_NODShiLtJ_G0034004.1 mouse_genomes_project 8 134812482 135161492 + MGP_NODShiLtJ_P0090269 Gse1 protein_coding protein_coding MGP_NODShiLtJ_T0090270.1 MGP_NODShiLtJ_G0034004.1 mouse_genomes_project 8 135080747 135189238 + MGP_NODShiLtJ_P0090270 Gse1 protein_coding protein_coding MGP_NODShiLtJ_T0090271.1 MGP_NODShiLtJ_G0034004.1 mouse_genomes_project 8 135142561 135187328 + MGP_NODShiLtJ_P0090271 Gse1 protein_coding protein_coding MGP_NODShiLtJ_T0090272.1 MGP_NODShiLtJ_G0034004.1 mouse_genomes_project 8 135144133 135187174 + MGP_NODShiLtJ_P0090272 Gse1 protein_coding protein_coding MGP_NODShiLtJ_T0090273.1 MGP_NODShiLtJ_G0034004.1 mouse_genomes_project 8 135179127 135181120 + Gse1 protein_coding retained_intron MGP_NODShiLtJ_T0090274.1 MGP_NODShiLtJ_G0034004.1 mouse_genomes_project 8 135179175 135183058 + Gse1 protein_coding processed_transcript MGP_NODShiLtJ_T0090478.1 MGP_NODShiLtJ_G0034054.1 mouse_genomes_project 8 138052256 138075685 + MGP_NODShiLtJ_P0090478 Zfp276 protein_coding protein_coding MGP_NODShiLtJ_T0090479.1 MGP_NODShiLtJ_G0034054.1 mouse_genomes_project 8 138052332 138055698 + Zfp276 protein_coding retained_intron MGP_NODShiLtJ_T0090480.1 MGP_NODShiLtJ_G0034054.1 mouse_genomes_project 8 138052345 138075683 + Zfp276 protein_coding retained_intron MGP_NODShiLtJ_T0090481.1 MGP_NODShiLtJ_G0034054.1 mouse_genomes_project 8 138052747 138070952 + MGP_NODShiLtJ_P0090481 Zfp276 protein_coding protein_coding MGP_NODShiLtJ_T0090482.1 MGP_NODShiLtJ_G0034054.1 mouse_genomes_project 8 138056608 138074062 + Zfp276 protein_coding retained_intron MGP_NODShiLtJ_T0090483.1 MGP_NODShiLtJ_G0034054.1 mouse_genomes_project 8 138057740 138073857 + Zfp276 protein_coding retained_intron MGP_NODShiLtJ_T0090484.1 MGP_NODShiLtJ_G0034054.1 mouse_genomes_project 8 138070702 138071525 + Zfp276 protein_coding retained_intron MGP_NODShiLtJ_T0098099.1 MGP_NODShiLtJ_G0036511.1 mouse_genomes_project 8 85618830 85618958 - Gm27355 rRNA rRNA MGP_NODShiLtJ_T0090127.1 MGP_NODShiLtJ_G0033954.1 mouse_genomes_project 8 125711325 125726225 + MGP_NODShiLtJ_P0090127 Gabarapl2 protein_coding protein_coding MGP_NODShiLtJ_T0090128.1 MGP_NODShiLtJ_G0033954.1 mouse_genomes_project 8 125711380 125712394 + Gabarapl2 protein_coding retained_intron MGP_NODShiLtJ_T0087916.1 MGP_NODShiLtJ_G0033219.1 mouse_genomes_project 8 18055765 18058018 + MGP_NODShiLtJ_P0087916 Spag11b protein_coding protein_coding MGP_NODShiLtJ_T0087917.1 MGP_NODShiLtJ_G0033219.1 mouse_genomes_project 8 18055804 18057757 + MGP_NODShiLtJ_P0087917 Spag11b protein_coding protein_coding MGP_NODShiLtJ_T0015851.1 MGP_NODShiLtJ_G0013959.1 mouse_genomes_project 8 39267862 39271063 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015860.1 MGP_NODShiLtJ_G0013968.1 mouse_genomes_project 8 68021648 68023823 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088478.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59588538 59613571 - Wdr17 protein_coding retained_intron MGP_NODShiLtJ_T0088479.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59588547 59723359 - MGP_NODShiLtJ_P0088479 Wdr17 protein_coding protein_coding MGP_NODShiLtJ_T0088480.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59588559 59703944 - MGP_NODShiLtJ_P0088480 Wdr17 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088481.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59592137 59717682 - MGP_NODShiLtJ_P0088481 Wdr17 protein_coding protein_coding MGP_NODShiLtJ_T0088482.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59614177 59620205 - Wdr17 protein_coding retained_intron MGP_NODShiLtJ_T0088483.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59635591 59672554 - MGP_NODShiLtJ_P0088483 Wdr17 protein_coding protein_coding MGP_NODShiLtJ_T0088484.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59635635 59723341 - Wdr17 protein_coding processed_transcript MGP_NODShiLtJ_T0088485.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59669844 59723339 - MGP_NODShiLtJ_P0088485 Wdr17 protein_coding protein_coding MGP_NODShiLtJ_T0088486.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59670176 59723465 - Wdr17 protein_coding processed_transcript MGP_NODShiLtJ_T0088487.1 MGP_NODShiLtJ_G0033419.1 mouse_genomes_project 8 59679613 59960219 - MGP_NODShiLtJ_P0088487 Wdr17 protein_coding protein_coding MGP_NODShiLtJ_T0089166.1 MGP_NODShiLtJ_G0033635.1 mouse_genomes_project 8 93026906 93067382 + MGP_NODShiLtJ_P0089166 Mgat4d protein_coding protein_coding MGP_NODShiLtJ_T0089167.1 MGP_NODShiLtJ_G0033635.1 mouse_genomes_project 8 93042819 93071387 + Mgat4d protein_coding processed_transcript MGP_NODShiLtJ_T0089417.1 MGP_NODShiLtJ_G0033705.1 mouse_genomes_project 8 95123927 95132077 + MGP_NODShiLtJ_P0089417 Orc6 protein_coding protein_coding MGP_NODShiLtJ_T0090508.1 MGP_NODShiLtJ_G0034061.1 mouse_genomes_project 8 138311962 138340108 + MGP_NODShiLtJ_P0090508 Afg3l1 protein_coding protein_coding MGP_NODShiLtJ_T0090509.1 MGP_NODShiLtJ_G0034061.1 mouse_genomes_project 8 138311962 138340108 + MGP_NODShiLtJ_P0090509 Afg3l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090510.1 MGP_NODShiLtJ_G0034061.1 mouse_genomes_project 8 138311999 138316365 + Afg3l1 protein_coding retained_intron MGP_NODShiLtJ_T0090511.1 MGP_NODShiLtJ_G0034061.1 mouse_genomes_project 8 138315437 138325087 + Afg3l1 protein_coding processed_transcript MGP_NODShiLtJ_T0090512.1 MGP_NODShiLtJ_G0034061.1 mouse_genomes_project 8 138329069 138335125 + Afg3l1 protein_coding retained_intron MGP_NODShiLtJ_T0090513.1 MGP_NODShiLtJ_G0034061.1 mouse_genomes_project 8 138337277 138337807 + Afg3l1 protein_coding retained_intron MGP_NODShiLtJ_T0088542.1 MGP_NODShiLtJ_G0033438.1 mouse_genomes_project 8 67595014 67754979 + MGP_NODShiLtJ_P0088542 Nek1 protein_coding protein_coding MGP_NODShiLtJ_T0088543.1 MGP_NODShiLtJ_G0033438.1 mouse_genomes_project 8 67595014 67754972 + MGP_NODShiLtJ_P0088543 Nek1 protein_coding protein_coding MGP_NODShiLtJ_T0088544.1 MGP_NODShiLtJ_G0033438.1 mouse_genomes_project 8 67595019 67649053 + Nek1 protein_coding retained_intron MGP_NODShiLtJ_T0088545.1 MGP_NODShiLtJ_G0033438.1 mouse_genomes_project 8 67595058 67729589 + Nek1 protein_coding retained_intron MGP_NODShiLtJ_T0088546.1 MGP_NODShiLtJ_G0033438.1 mouse_genomes_project 8 67595060 67633698 + Nek1 protein_coding retained_intron MGP_NODShiLtJ_T0088547.1 MGP_NODShiLtJ_G0033438.1 mouse_genomes_project 8 67595060 67633175 + Nek1 protein_coding retained_intron MGP_NODShiLtJ_T0088548.1 MGP_NODShiLtJ_G0033438.1 mouse_genomes_project 8 67654344 67712350 + MGP_NODShiLtJ_P0088548 Nek1 protein_coding protein_coding MGP_NODShiLtJ_T0088524.1 MGP_NODShiLtJ_G0033435.1 mouse_genomes_project 8 67231109 67279159 + MGP_NODShiLtJ_P0088524 Mfap3l protein_coding protein_coding MGP_NODShiLtJ_T0088525.1 MGP_NODShiLtJ_G0033435.1 mouse_genomes_project 8 67231142 67280540 + MGP_NODShiLtJ_P0088525 Mfap3l protein_coding protein_coding MGP_NODShiLtJ_T0088526.1 MGP_NODShiLtJ_G0033435.1 mouse_genomes_project 8 67253894 67276685 + MGP_NODShiLtJ_P0088526 Mfap3l protein_coding protein_coding MGP_NODShiLtJ_T0088527.1 MGP_NODShiLtJ_G0033435.1 mouse_genomes_project 8 67254330 67276581 + MGP_NODShiLtJ_P0088527 Mfap3l protein_coding protein_coding MGP_NODShiLtJ_T0010873.1 MGP_NODShiLtJ_G0009006.1 mouse_genomes_project 8 93744762 93744899 + Mir8111 miRNA miRNA MGP_NODShiLtJ_T0089631.1 MGP_NODShiLtJ_G0033773.1 mouse_genomes_project 8 105337761 105339344 + MGP_NODShiLtJ_P0089631 Ccl17 protein_coding protein_coding MGP_NODShiLtJ_T0087821.1 MGP_NODShiLtJ_G0033186.1 mouse_genomes_project 8 11978002 11989727 - MGP_NODShiLtJ_P0087821 1700029H14Rik protein_coding protein_coding MGP_NODShiLtJ_T0087822.1 MGP_NODShiLtJ_G0033186.1 mouse_genomes_project 8 11978002 11989714 - MGP_NODShiLtJ_P0087822 1700029H14Rik protein_coding protein_coding MGP_NODShiLtJ_T0087823.1 MGP_NODShiLtJ_G0033186.1 mouse_genomes_project 8 11978280 11989671 - MGP_NODShiLtJ_P0087823 1700029H14Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087824.1 MGP_NODShiLtJ_G0033186.1 mouse_genomes_project 8 11978301 11989670 - MGP_NODShiLtJ_P0087824 1700029H14Rik protein_coding protein_coding MGP_NODShiLtJ_T0087825.1 MGP_NODShiLtJ_G0033186.1 mouse_genomes_project 8 11983224 11989671 - MGP_NODShiLtJ_P0087825 1700029H14Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089040.1 MGP_NODShiLtJ_G0033590.1 mouse_genomes_project 8 80918686 80933729 - MGP_NODShiLtJ_P0089040 Cherp protein_coding protein_coding MGP_NODShiLtJ_T0011606.1 MGP_NODShiLtJ_G0009739.1 mouse_genomes_project 8 32010336 32010437 - Gm24184 misc_RNA misc_RNA MGP_NODShiLtJ_T0088715.1 MGP_NODShiLtJ_G0033491.1 mouse_genomes_project 8 78223133 78251089 - MGP_NODShiLtJ_P0088715 Mau2 protein_coding protein_coding MGP_NODShiLtJ_T0088716.1 MGP_NODShiLtJ_G0033491.1 mouse_genomes_project 8 78223133 78251138 - MGP_NODShiLtJ_P0088716 Mau2 protein_coding protein_coding MGP_NODShiLtJ_T0087793.1 MGP_NODShiLtJ_G0033175.1 mouse_genomes_project 8 11493369 11536368 + MGP_NODShiLtJ_P0087793 Cul4a protein_coding protein_coding MGP_NODShiLtJ_T0087794.1 MGP_NODShiLtJ_G0033175.1 mouse_genomes_project 8 11493488 11511231 + MGP_NODShiLtJ_P0087794 Cul4a protein_coding protein_coding MGP_NODShiLtJ_T0087795.1 MGP_NODShiLtJ_G0033175.1 mouse_genomes_project 8 11493684 11508755 + Cul4a protein_coding retained_intron MGP_NODShiLtJ_T0087796.1 MGP_NODShiLtJ_G0033175.1 mouse_genomes_project 8 11510533 11535790 + MGP_NODShiLtJ_P0087796 Cul4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087797.1 MGP_NODShiLtJ_G0033175.1 mouse_genomes_project 8 11527776 11530526 + Cul4a protein_coding retained_intron MGP_NODShiLtJ_T0087798.1 MGP_NODShiLtJ_G0033175.1 mouse_genomes_project 8 11528240 11535047 + Cul4a protein_coding processed_transcript MGP_NODShiLtJ_T0087799.1 MGP_NODShiLtJ_G0033175.1 mouse_genomes_project 8 11532652 11536368 + Cul4a protein_coding retained_intron MGP_NODShiLtJ_T0087566.1 MGP_NODShiLtJ_G0033111.1 mouse_genomes_project 8 458331 473534 + MGP_NODShiLtJ_P0087566 Mcoln1 protein_coding protein_coding MGP_NODShiLtJ_T0087567.1 MGP_NODShiLtJ_G0033111.1 mouse_genomes_project 8 458378 465243 + MGP_NODShiLtJ_P0087567 Mcoln1 protein_coding protein_coding MGP_NODShiLtJ_T0087568.1 MGP_NODShiLtJ_G0033111.1 mouse_genomes_project 8 464080 473534 + Mcoln1 protein_coding retained_intron MGP_NODShiLtJ_T0087569.1 MGP_NODShiLtJ_G0033111.1 mouse_genomes_project 8 468968 471324 + Mcoln1 protein_coding retained_intron MGP_NODShiLtJ_T0087570.1 MGP_NODShiLtJ_G0033111.1 mouse_genomes_project 8 469897 471109 + Mcoln1 protein_coding retained_intron MGP_NODShiLtJ_T0087571.1 MGP_NODShiLtJ_G0033111.1 mouse_genomes_project 8 470983 473526 + Mcoln1 protein_coding retained_intron MGP_NODShiLtJ_T0087572.1 MGP_NODShiLtJ_G0033111.1 mouse_genomes_project 8 472863 473534 + Mcoln1 protein_coding retained_intron MGP_NODShiLtJ_T0009003.1 MGP_NODShiLtJ_G0007234.1 mouse_genomes_project 8 30784795 30792752 + 4933433F19Rik lincRNA lincRNA MGP_NODShiLtJ_T0088807.1 MGP_NODShiLtJ_G0033513.1 mouse_genomes_project 8 78759842 78762272 - 2810428I15Rik protein_coding retained_intron MGP_NODShiLtJ_T0088808.1 MGP_NODShiLtJ_G0033513.1 mouse_genomes_project 8 78759845 78761663 - 2810428I15Rik protein_coding retained_intron MGP_NODShiLtJ_T0088809.1 MGP_NODShiLtJ_G0033513.1 mouse_genomes_project 8 78759845 78761977 - 2810428I15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0088810.1 MGP_NODShiLtJ_G0033513.1 mouse_genomes_project 8 78759845 78762303 - MGP_NODShiLtJ_P0088810 2810428I15Rik protein_coding protein_coding MGP_NODShiLtJ_T0088811.1 MGP_NODShiLtJ_G0033513.1 mouse_genomes_project 8 78759849 78762288 - MGP_NODShiLtJ_P0088811 2810428I15Rik protein_coding protein_coding MGP_NODShiLtJ_T0088812.1 MGP_NODShiLtJ_G0033513.1 mouse_genomes_project 8 78759948 78761659 - 2810428I15Rik protein_coding retained_intron MGP_NODShiLtJ_T0088813.1 MGP_NODShiLtJ_G0033513.1 mouse_genomes_project 8 78760795 78762250 - 2810428I15Rik protein_coding retained_intron MGP_NODShiLtJ_T0088814.1 MGP_NODShiLtJ_G0033513.1 mouse_genomes_project 8 78761401 78762264 - 2810428I15Rik protein_coding retained_intron MGP_NODShiLtJ_T0088717.1 MGP_NODShiLtJ_G0033492.1 mouse_genomes_project 8 78251216 78282794 + MGP_NODShiLtJ_P0088717 Sugp1 protein_coding protein_coding MGP_NODShiLtJ_T0009093.1 MGP_NODShiLtJ_G0007299.1 mouse_genomes_project 8 119417370 119434832 + Gm10629 lincRNA lincRNA MGP_NODShiLtJ_T0018317.1 MGP_NODShiLtJ_G0015585.1 mouse_genomes_project 8 94649764 94650982 + 1700122E12Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018318.1 MGP_NODShiLtJ_G0015585.1 mouse_genomes_project 8 94650014 94650783 + 1700122E12Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0090279.1 MGP_NODShiLtJ_G0034006.1 mouse_genomes_project 8 135217960 135245538 - MGP_NODShiLtJ_P0090279 1190005I06Rik protein_coding protein_coding MGP_NODShiLtJ_T0090281.1 MGP_NODShiLtJ_G0034006.1 mouse_genomes_project 8 135218159 135261571 - MGP_NODShiLtJ_P0090281 1190005I06Rik protein_coding protein_coding MGP_NODShiLtJ_T0090282.1 MGP_NODShiLtJ_G0034006.1 mouse_genomes_project 8 135218293 135245409 - MGP_NODShiLtJ_P0090282 1190005I06Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088217.1 MGP_NODShiLtJ_G0033338.1 mouse_genomes_project 8 34710466 34725918 - MGP_NODShiLtJ_P0088217 Leprotl1 protein_coding protein_coding MGP_NODShiLtJ_T0100855.1 MGP_NODShiLtJ_G0039249.1 mouse_genomes_project 8 144005672 144005799 + Gm26100 snoRNA snoRNA MGP_NODShiLtJ_T0087552.1 MGP_NODShiLtJ_G0033106.1 mouse_genomes_project 8 297163 337361 + MGP_NODShiLtJ_P0087552 A430078G23Rik protein_coding protein_coding MGP_NODShiLtJ_T0087549.1 MGP_NODShiLtJ_G0033105.1 mouse_genomes_project 8 71898 211321 - MGP_NODShiLtJ_P0087549 Insr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087550.1 MGP_NODShiLtJ_G0033105.1 mouse_genomes_project 8 71906 211810 - MGP_NODShiLtJ_P0087550 Insr protein_coding protein_coding MGP_NODShiLtJ_T0087551.1 MGP_NODShiLtJ_G0033105.1 mouse_genomes_project 8 136718 211744 - Insr protein_coding retained_intron MGP_NODShiLtJ_T0089002.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351921 80371161 + MGP_NODShiLtJ_P0089002 Zfp961 protein_coding protein_coding MGP_NODShiLtJ_T0089003.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351931 80371161 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089004.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351949 80370754 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089005.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351950 80369106 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089006.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351953 80368881 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089007.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351954 80369157 + MGP_NODShiLtJ_P0089007 Zfp961 protein_coding protein_coding MGP_NODShiLtJ_T0089008.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351960 80368997 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089009.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351963 80369346 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089010.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351964 80367072 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089011.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351964 80369807 + MGP_NODShiLtJ_P0089011 Zfp961 protein_coding protein_coding MGP_NODShiLtJ_T0089012.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351974 80395106 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089013.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80351974 80372544 + MGP_NODShiLtJ_P0089013 Zfp961 protein_coding protein_coding MGP_NODShiLtJ_T0089014.1 MGP_NODShiLtJ_G0033577.1 mouse_genomes_project 8 80354327 80369004 + Zfp961 protein_coding processed_transcript MGP_NODShiLtJ_T0089347.1 MGP_NODShiLtJ_G0033685.1 mouse_genomes_project 8 94718283 94747121 - MGP_NODShiLtJ_P0089347 protein_coding protein_coding MGP_NODShiLtJ_T0089348.1 MGP_NODShiLtJ_G0033685.1 mouse_genomes_project 8 94718286 94731849 - protein_coding retained_intron MGP_NODShiLtJ_T0089349.1 MGP_NODShiLtJ_G0033685.1 mouse_genomes_project 8 94718288 94747127 - MGP_NODShiLtJ_P0089349 protein_coding protein_coding MGP_NODShiLtJ_T0089351.1 MGP_NODShiLtJ_G0033685.1 mouse_genomes_project 8 94728361 94733883 - protein_coding retained_intron MGP_NODShiLtJ_T0089352.1 MGP_NODShiLtJ_G0033685.1 mouse_genomes_project 8 94731463 94736849 - protein_coding retained_intron MGP_NODShiLtJ_T0089353.1 MGP_NODShiLtJ_G0033685.1 mouse_genomes_project 8 94744688 94747112 - protein_coding retained_intron MGP_NODShiLtJ_T0018287.1 MGP_NODShiLtJ_G0015574.1 mouse_genomes_project 8 24418169 24422921 + Gm16933 processed_transcript processed_transcript MGP_NODShiLtJ_T0015863.1 MGP_NODShiLtJ_G0013971.1 mouse_genomes_project 8 74366438 74366735 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088505.1 MGP_NODShiLtJ_G0033428.1 mouse_genomes_project 8 63143206 63148661 - MGP_NODShiLtJ_P0088505 Sap30 protein_coding protein_coding MGP_NODShiLtJ_T0010862.1 MGP_NODShiLtJ_G0008995.1 mouse_genomes_project 8 78313203 78313266 - Mir7066 miRNA miRNA MGP_NODShiLtJ_T0089660.1 MGP_NODShiLtJ_G0033781.1 mouse_genomes_project 8 105562652 105599269 + MGP_NODShiLtJ_P0089660 Adgrg3 protein_coding protein_coding MGP_NODShiLtJ_T0089536.1 MGP_NODShiLtJ_G0033738.1 mouse_genomes_project 8 102713971 102720111 + MGP_NODShiLtJ_P0089536 Irx5 protein_coding protein_coding MGP_NODShiLtJ_T0088921.1 MGP_NODShiLtJ_G0033554.1 mouse_genomes_project 8 79737216 79741089 + MGP_NODShiLtJ_P0088921 Ankle1 protein_coding protein_coding MGP_NODShiLtJ_T0088922.1 MGP_NODShiLtJ_G0033554.1 mouse_genomes_project 8 79737222 79741053 + Ankle1 protein_coding retained_intron MGP_NODShiLtJ_T0088923.1 MGP_NODShiLtJ_G0033554.1 mouse_genomes_project 8 79737228 79740683 + Ankle1 protein_coding retained_intron MGP_NODShiLtJ_T0088924.1 MGP_NODShiLtJ_G0033554.1 mouse_genomes_project 8 79737230 79740690 + MGP_NODShiLtJ_P0088924 Ankle1 protein_coding protein_coding MGP_NODShiLtJ_T0088925.1 MGP_NODShiLtJ_G0033554.1 mouse_genomes_project 8 79738897 79740364 + Ankle1 protein_coding retained_intron MGP_NODShiLtJ_T0088059.1 MGP_NODShiLtJ_G0033284.1 mouse_genomes_project 8 24396949 24402359 + MGP_NODShiLtJ_P0088059 Tm2d2 protein_coding protein_coding MGP_NODShiLtJ_T0087937.1 MGP_NODShiLtJ_G0033238.1 mouse_genomes_project 8 20868236 20884921 + MGP_NODShiLtJ_P0087937 Defb1 protein_coding protein_coding MGP_NODShiLtJ_T0100800.1 MGP_NODShiLtJ_G0039194.1 mouse_genomes_project 8 22513360 22513492 - Gm24335 snoRNA snoRNA MGP_NODShiLtJ_T0088981.1 MGP_NODShiLtJ_G0033571.1 mouse_genomes_project 8 80036457 80037819 + MGP_NODShiLtJ_P0088981 Insl3 protein_coding protein_coding MGP_NODShiLtJ_T0009120.1 MGP_NODShiLtJ_G0007320.1 mouse_genomes_project 8 136965308 136968404 + Gm22 lincRNA lincRNA MGP_NODShiLtJ_T0009121.1 MGP_NODShiLtJ_G0007320.1 mouse_genomes_project 8 136965308 136968400 + Gm22 lincRNA lincRNA MGP_NODShiLtJ_T0088019.1 MGP_NODShiLtJ_G0033273.1 mouse_genomes_project 8 22643854 22682893 + MGP_NODShiLtJ_P0088019 Sfrp1 protein_coding protein_coding MGP_NODShiLtJ_T0089880.1 MGP_NODShiLtJ_G0033870.1 mouse_genomes_project 8 119025378 119027247 - MGP_NODShiLtJ_P0089880 Ctrl protein_coding protein_coding MGP_NODShiLtJ_T0098459.1 MGP_NODShiLtJ_G0036859.1 mouse_genomes_project 8 135124579 135125651 + Gm26971 sense_intronic sense_intronic MGP_NODShiLtJ_T0089141.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 90730228 91613321 + MGP_NODShiLtJ_P0089141 Inpp4b protein_coding protein_coding MGP_NODShiLtJ_T0089142.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 90730232 91684042 + MGP_NODShiLtJ_P0089142 Inpp4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089143.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 90730232 91683810 + MGP_NODShiLtJ_P0089143 Inpp4b protein_coding protein_coding MGP_NODShiLtJ_T0089144.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 90730232 91686294 + MGP_NODShiLtJ_P0089144 Inpp4b protein_coding protein_coding MGP_NODShiLtJ_T0089145.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 91193929 91683815 + MGP_NODShiLtJ_P0089145 Inpp4b protein_coding protein_coding MGP_NODShiLtJ_T0089146.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 91246275 91294804 + Inpp4b protein_coding processed_transcript MGP_NODShiLtJ_T0089147.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 91249166 91385478 + Inpp4b protein_coding processed_transcript MGP_NODShiLtJ_T0089148.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 91252208 91613321 + MGP_NODShiLtJ_P0089148 Inpp4b protein_coding protein_coding MGP_NODShiLtJ_T0089149.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 91329480 91451799 + Inpp4b protein_coding processed_transcript MGP_NODShiLtJ_T0089150.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 91350182 91683824 + MGP_NODShiLtJ_P0089150 Inpp4b protein_coding protein_coding MGP_NODShiLtJ_T0089151.1 MGP_NODShiLtJ_G0033627.1 mouse_genomes_project 8 91392509 91405656 + Inpp4b protein_coding processed_transcript MGP_NODShiLtJ_T0010910.1 MGP_NODShiLtJ_G0009043.1 mouse_genomes_project 8 125427372 125427446 - Mir7076 miRNA miRNA MGP_NODShiLtJ_T0089567.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104247425 104395482 + MGP_NODShiLtJ_P0089567 Gnao1 protein_coding protein_coding MGP_NODShiLtJ_T0089568.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104248483 104249568 + Gnao1 protein_coding retained_intron MGP_NODShiLtJ_T0089569.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104248595 104405420 + MGP_NODShiLtJ_P0089569 Gnao1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089570.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104248638 104414076 + MGP_NODShiLtJ_P0089570 Gnao1 protein_coding protein_coding MGP_NODShiLtJ_T0089571.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104248640 104413646 + MGP_NODShiLtJ_P0089571 Gnao1 protein_coding protein_coding MGP_NODShiLtJ_T0089572.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104249113 104402574 + Gnao1 protein_coding processed_transcript MGP_NODShiLtJ_T0089573.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104336416 104412853 + MGP_NODShiLtJ_P0089573 Gnao1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089574.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104394553 104395754 + Gnao1 protein_coding retained_intron MGP_NODShiLtJ_T0089575.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104395483 104412750 + MGP_NODShiLtJ_P0089575 Gnao1 protein_coding protein_coding MGP_NODShiLtJ_T0089576.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104395483 104412771 + MGP_NODShiLtJ_P0089576 Gnao1 protein_coding protein_coding MGP_NODShiLtJ_T0089577.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104398023 104401657 + Gnao1 protein_coding processed_transcript MGP_NODShiLtJ_T0089578.1 MGP_NODShiLtJ_G0033753.1 mouse_genomes_project 8 104407551 104411711 + Gnao1 protein_coding retained_intron MGP_NODShiLtJ_T0089037.1 MGP_NODShiLtJ_G0033589.1 mouse_genomes_project 8 80895729 80919199 + MGP_NODShiLtJ_P0089037 1700030K09Rik protein_coding protein_coding MGP_NODShiLtJ_T0089038.1 MGP_NODShiLtJ_G0033589.1 mouse_genomes_project 8 80895781 80918839 + MGP_NODShiLtJ_P0089038 1700030K09Rik protein_coding protein_coding MGP_NODShiLtJ_T0089039.1 MGP_NODShiLtJ_G0033589.1 mouse_genomes_project 8 80916087 80916849 + 1700030K09Rik protein_coding retained_intron MGP_NODShiLtJ_T0089771.1 MGP_NODShiLtJ_G0033824.1 mouse_genomes_project 8 117906437 117914850 + MGP_NODShiLtJ_P0089771 Ces2e protein_coding protein_coding MGP_NODShiLtJ_T0089772.1 MGP_NODShiLtJ_G0033824.1 mouse_genomes_project 8 117906437 117914850 + MGP_NODShiLtJ_P0089772 Ces2e protein_coding protein_coding MGP_NODShiLtJ_T0088873.1 MGP_NODShiLtJ_G0033539.1 mouse_genomes_project 8 79179410 79182938 - MGP_NODShiLtJ_P0088873 Rpl18a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088874.1 MGP_NODShiLtJ_G0033539.1 mouse_genomes_project 8 79180233 79189226 - MGP_NODShiLtJ_P0088874 Rpl18a protein_coding protein_coding MGP_NODShiLtJ_T0090446.1 MGP_NODShiLtJ_G0034046.1 mouse_genomes_project 8 137882289 137901013 + Cpne7 protein_coding retained_intron MGP_NODShiLtJ_T0090447.1 MGP_NODShiLtJ_G0034046.1 mouse_genomes_project 8 137882293 137901015 + MGP_NODShiLtJ_P0090447 Cpne7 protein_coding protein_coding MGP_NODShiLtJ_T0090448.1 MGP_NODShiLtJ_G0034046.1 mouse_genomes_project 8 137882362 137901015 + Cpne7 protein_coding retained_intron MGP_NODShiLtJ_T0090449.1 MGP_NODShiLtJ_G0034046.1 mouse_genomes_project 8 137891188 137892045 + Cpne7 protein_coding processed_transcript MGP_NODShiLtJ_T0090450.1 MGP_NODShiLtJ_G0034046.1 mouse_genomes_project 8 137893294 137896564 + Cpne7 protein_coding retained_intron MGP_NODShiLtJ_T0090005.1 MGP_NODShiLtJ_G0033913.1 mouse_genomes_project 8 123113127 123172900 + MGP_NODShiLtJ_P0090005 Pkd1l3 protein_coding protein_coding MGP_NODShiLtJ_T0090006.1 MGP_NODShiLtJ_G0033913.1 mouse_genomes_project 8 123113127 123174816 + MGP_NODShiLtJ_P0090006 Pkd1l3 protein_coding protein_coding MGP_NODShiLtJ_T0090194.1 MGP_NODShiLtJ_G0033980.1 mouse_genomes_project 8 132077221 132143057 + MGP_NODShiLtJ_P0090194 Hsd17b2 protein_coding protein_coding MGP_NODShiLtJ_T0010923.1 MGP_NODShiLtJ_G0009056.1 mouse_genomes_project 8 143487131 143487209 - Mir21c miRNA miRNA MGP_NODShiLtJ_T0088782.1 MGP_NODShiLtJ_G0033505.1 mouse_genomes_project 8 78532539 78543000 + MGP_NODShiLtJ_P0088782 Cope protein_coding protein_coding MGP_NODShiLtJ_T0088783.1 MGP_NODShiLtJ_G0033505.1 mouse_genomes_project 8 78532762 78536439 + Cope protein_coding retained_intron MGP_NODShiLtJ_T0088784.1 MGP_NODShiLtJ_G0033505.1 mouse_genomes_project 8 78532790 78543003 + Cope protein_coding retained_intron MGP_NODShiLtJ_T0088785.1 MGP_NODShiLtJ_G0033505.1 mouse_genomes_project 8 78532794 78540501 + MGP_NODShiLtJ_P0088785 Cope protein_coding protein_coding MGP_NODShiLtJ_T0088786.1 MGP_NODShiLtJ_G0033505.1 mouse_genomes_project 8 78532814 78536944 + Cope protein_coding retained_intron MGP_NODShiLtJ_T0088787.1 MGP_NODShiLtJ_G0033505.1 mouse_genomes_project 8 78532817 78542782 + MGP_NODShiLtJ_P0088787 Cope protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088788.1 MGP_NODShiLtJ_G0033505.1 mouse_genomes_project 8 78535719 78543000 + MGP_NODShiLtJ_P0088788 Cope protein_coding protein_coding MGP_NODShiLtJ_T0088789.1 MGP_NODShiLtJ_G0033505.1 mouse_genomes_project 8 78538524 78543000 + MGP_NODShiLtJ_P0088789 Cope protein_coding protein_coding MGP_NODShiLtJ_T0089929.1 MGP_NODShiLtJ_G0033889.1 mouse_genomes_project 8 119842775 120030055 + MGP_NODShiLtJ_P0089929 Tango6 protein_coding protein_coding MGP_NODShiLtJ_T0009067.1 MGP_NODShiLtJ_G0007284.1 mouse_genomes_project 8 102137066 102145894 + Irx3os lincRNA lincRNA MGP_NODShiLtJ_T0009068.1 MGP_NODShiLtJ_G0007284.1 mouse_genomes_project 8 102138826 102143567 + Irx3os lincRNA lincRNA MGP_NODShiLtJ_T0087910.1 MGP_NODShiLtJ_G0033213.1 mouse_genomes_project 8 17876329 17879644 - MGP_NODShiLtJ_P0087910 Defb40 protein_coding protein_coding MGP_NODShiLtJ_T0089989.1 MGP_NODShiLtJ_G0033908.1 mouse_genomes_project 8 122965920 123024664 + MGP_NODShiLtJ_P0089989 Pmfbp1 protein_coding protein_coding MGP_NODShiLtJ_T0089809.1 MGP_NODShiLtJ_G0033839.1 mouse_genomes_project 8 118317124 118323299 - MGP_NODShiLtJ_P0089809 Exoc3l protein_coding protein_coding MGP_NODShiLtJ_T0089461.1 MGP_NODShiLtJ_G0033719.1 mouse_genomes_project 8 97668192 97914485 - MGP_NODShiLtJ_P0089461 Zfp423 protein_coding protein_coding MGP_NODShiLtJ_T0089462.1 MGP_NODShiLtJ_G0033719.1 mouse_genomes_project 8 97668331 97981060 - MGP_NODShiLtJ_P0089462 Zfp423 protein_coding protein_coding MGP_NODShiLtJ_T0089463.1 MGP_NODShiLtJ_G0033719.1 mouse_genomes_project 8 97792824 97975712 - MGP_NODShiLtJ_P0089463 Zfp423 protein_coding protein_coding MGP_NODShiLtJ_T0089464.1 MGP_NODShiLtJ_G0033719.1 mouse_genomes_project 8 97792979 97814439 - MGP_NODShiLtJ_P0089464 Zfp423 protein_coding protein_coding MGP_NODShiLtJ_T0089465.1 MGP_NODShiLtJ_G0033719.1 mouse_genomes_project 8 97793148 97965142 - Zfp423 protein_coding processed_transcript MGP_NODShiLtJ_T0089466.1 MGP_NODShiLtJ_G0033719.1 mouse_genomes_project 8 97793165 97969822 - Zfp423 protein_coding processed_transcript MGP_NODShiLtJ_T0098090.1 MGP_NODShiLtJ_G0036502.1 mouse_genomes_project 8 7650752 7650870 - n-R5s95 rRNA rRNA MGP_NODShiLtJ_T0090463.1 MGP_NODShiLtJ_G0034052.1 mouse_genomes_project 8 138028665 138032617 - MGP_NODShiLtJ_P0090463 Spata2l protein_coding protein_coding MGP_NODShiLtJ_T0090464.1 MGP_NODShiLtJ_G0034052.1 mouse_genomes_project 8 138028668 138032620 - MGP_NODShiLtJ_P0090464 Spata2l protein_coding protein_coding MGP_NODShiLtJ_T0090563.1 MGP_NODShiLtJ_G0034081.1 mouse_genomes_project 8 139683210 139696219 - MGP_NODShiLtJ_P0090563 Fam89a protein_coding protein_coding MGP_NODShiLtJ_T0090424.1 MGP_NODShiLtJ_G0034041.1 mouse_genomes_project 8 137506400 137546957 + MGP_NODShiLtJ_P0090424 Acsf3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0015853.1 MGP_NODShiLtJ_G0013961.1 mouse_genomes_project 8 43885750 43894129 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089833.1 MGP_NODShiLtJ_G0033848.1 mouse_genomes_project 8 118451021 118484700 + Lrrc36 protein_coding processed_transcript MGP_NODShiLtJ_T0089834.1 MGP_NODShiLtJ_G0033848.1 mouse_genomes_project 8 118451072 118466452 + Lrrc36 protein_coding processed_transcript MGP_NODShiLtJ_T0089835.1 MGP_NODShiLtJ_G0033848.1 mouse_genomes_project 8 118451072 118509813 + MGP_NODShiLtJ_P0089835 Lrrc36 protein_coding protein_coding MGP_NODShiLtJ_T0089836.1 MGP_NODShiLtJ_G0033848.1 mouse_genomes_project 8 118467188 118509811 + MGP_NODShiLtJ_P0089836 Lrrc36 protein_coding protein_coding MGP_NODShiLtJ_T0090535.1 MGP_NODShiLtJ_G0034074.1 mouse_genomes_project 8 139281655 139358737 - MGP_NODShiLtJ_P0090535 Pgbd5 protein_coding protein_coding MGP_NODShiLtJ_T0090536.1 MGP_NODShiLtJ_G0034074.1 mouse_genomes_project 8 139281655 139352993 - MGP_NODShiLtJ_P0090536 Pgbd5 protein_coding protein_coding MGP_NODShiLtJ_T0090537.1 MGP_NODShiLtJ_G0034074.1 mouse_genomes_project 8 139281659 139353395 - MGP_NODShiLtJ_P0090537 Pgbd5 protein_coding protein_coding MGP_NODShiLtJ_T0090538.1 MGP_NODShiLtJ_G0034074.1 mouse_genomes_project 8 139282629 139308704 - MGP_NODShiLtJ_P0090538 Pgbd5 protein_coding protein_coding MGP_NODShiLtJ_T0090539.1 MGP_NODShiLtJ_G0034074.1 mouse_genomes_project 8 139284963 139289697 - Pgbd5 protein_coding processed_transcript MGP_NODShiLtJ_T0090540.1 MGP_NODShiLtJ_G0034074.1 mouse_genomes_project 8 139284979 139289263 - Pgbd5 protein_coding retained_intron MGP_NODShiLtJ_T0010919.1 MGP_NODShiLtJ_G0009052.1 mouse_genomes_project 8 137869691 137869760 + Mir7079 miRNA miRNA MGP_NODShiLtJ_T0088050.1 MGP_NODShiLtJ_G0033282.1 mouse_genomes_project 8 24208055 24325558 - MGP_NODShiLtJ_P0088050 Adam32 protein_coding protein_coding MGP_NODShiLtJ_T0088051.1 MGP_NODShiLtJ_G0033282.1 mouse_genomes_project 8 24208058 24235298 - Adam32 protein_coding retained_intron MGP_NODShiLtJ_T0088052.1 MGP_NODShiLtJ_G0033282.1 mouse_genomes_project 8 24208058 24244943 - MGP_NODShiLtJ_P0088052 Adam32 protein_coding protein_coding MGP_NODShiLtJ_T0088053.1 MGP_NODShiLtJ_G0033282.1 mouse_genomes_project 8 24208061 24256734 - MGP_NODShiLtJ_P0088053 Adam32 protein_coding protein_coding MGP_NODShiLtJ_T0088054.1 MGP_NODShiLtJ_G0033282.1 mouse_genomes_project 8 24208061 24325549 - MGP_NODShiLtJ_P0088054 Adam32 protein_coding protein_coding MGP_NODShiLtJ_T0088055.1 MGP_NODShiLtJ_G0033282.1 mouse_genomes_project 8 24208120 24234171 - MGP_NODShiLtJ_P0088055 Adam32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088056.1 MGP_NODShiLtJ_G0033282.1 mouse_genomes_project 8 24287145 24325535 - MGP_NODShiLtJ_P0088056 Adam32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088057.1 MGP_NODShiLtJ_G0033282.1 mouse_genomes_project 8 24294939 24325558 - Adam32 protein_coding retained_intron MGP_NODShiLtJ_T0018334.1 MGP_NODShiLtJ_G0015594.1 mouse_genomes_project 8 139792094 139817498 + Gm16163 processed_transcript processed_transcript MGP_NODShiLtJ_T0089954.1 MGP_NODShiLtJ_G0033900.1 mouse_genomes_project 8 120269499 120298003 - MGP_NODShiLtJ_P0089954 Terf2 protein_coding protein_coding MGP_NODShiLtJ_T0089955.1 MGP_NODShiLtJ_G0033900.1 mouse_genomes_project 8 120269501 120298003 - MGP_NODShiLtJ_P0089955 Terf2 protein_coding protein_coding MGP_NODShiLtJ_T0089956.1 MGP_NODShiLtJ_G0033900.1 mouse_genomes_project 8 120269501 120297633 - MGP_NODShiLtJ_P0089956 Terf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089957.1 MGP_NODShiLtJ_G0033900.1 mouse_genomes_project 8 120270027 120297972 - MGP_NODShiLtJ_P0089957 Terf2 protein_coding protein_coding MGP_NODShiLtJ_T0089958.1 MGP_NODShiLtJ_G0033900.1 mouse_genomes_project 8 120275616 120298005 - MGP_NODShiLtJ_P0089958 Terf2 protein_coding protein_coding MGP_NODShiLtJ_T0089959.1 MGP_NODShiLtJ_G0033900.1 mouse_genomes_project 8 120276418 120279975 - Terf2 protein_coding retained_intron MGP_NODShiLtJ_T0089960.1 MGP_NODShiLtJ_G0033900.1 mouse_genomes_project 8 120279527 120281541 - Terf2 protein_coding retained_intron MGP_NODShiLtJ_T0089961.1 MGP_NODShiLtJ_G0033900.1 mouse_genomes_project 8 120279536 120283317 - Terf2 protein_coding retained_intron MGP_NODShiLtJ_T0097841.1 MGP_NODShiLtJ_G0036253.1 mouse_genomes_project 8 131023099 131024435 - pseudogene pseudogene MGP_NODShiLtJ_T0089118.1 MGP_NODShiLtJ_G0033616.1 mouse_genomes_project 8 88491571 88512852 - MGP_NODShiLtJ_P0089118 Mmaa protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088249.1 MGP_NODShiLtJ_G0033354.1 mouse_genomes_project 8 40574403 40727832 + MGP_NODShiLtJ_P0088249 Tusc3 protein_coding protein_coding MGP_NODShiLtJ_T0089246.1 MGP_NODShiLtJ_G0033664.1 mouse_genomes_project 8 93964969 93995038 - MGP_NODShiLtJ_P0089246 Zswim4 protein_coding protein_coding MGP_NODShiLtJ_T0090574.1 MGP_NODShiLtJ_G0034086.1 mouse_genomes_project 8 139852842 139858746 + MGP_NODShiLtJ_P0090574 Sprtn protein_coding protein_coding MGP_NODShiLtJ_T0089156.1 MGP_NODShiLtJ_G0033632.1 mouse_genomes_project 8 92825861 92938546 + MGP_NODShiLtJ_P0089156 Tbc1d9 protein_coding protein_coding MGP_NODShiLtJ_T0089157.1 MGP_NODShiLtJ_G0033632.1 mouse_genomes_project 8 92826369 92939059 + MGP_NODShiLtJ_P0089157 Tbc1d9 protein_coding protein_coding MGP_NODShiLtJ_T0089158.1 MGP_NODShiLtJ_G0033632.1 mouse_genomes_project 8 92924438 92937073 + Tbc1d9 protein_coding retained_intron MGP_NODShiLtJ_T0089869.1 MGP_NODShiLtJ_G0033866.1 mouse_genomes_project 8 118950401 118971299 + MGP_NODShiLtJ_P0089869 Nutf2-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0090008.1 MGP_NODShiLtJ_G0033915.1 mouse_genomes_project 8 123209179 123228563 + MGP_NODShiLtJ_P0090008 Zfp821 protein_coding protein_coding MGP_NODShiLtJ_T0090415.1 MGP_NODShiLtJ_G0034038.1 mouse_genomes_project 8 137332166 137337948 + MGP_NODShiLtJ_P0090415 Trappc2l protein_coding protein_coding MGP_NODShiLtJ_T0005311.1 MGP_NODShiLtJ_G0004496.1 mouse_genomes_project 8 77140093 77161664 + Gm15716 antisense antisense MGP_NODShiLtJ_T0089055.1 MGP_NODShiLtJ_G0033596.1 mouse_genomes_project 8 81172454 81189592 + MGP_NODShiLtJ_P0089055 Sin3b protein_coding protein_coding MGP_NODShiLtJ_T0089056.1 MGP_NODShiLtJ_G0033596.1 mouse_genomes_project 8 81172454 81207772 + MGP_NODShiLtJ_P0089056 Sin3b protein_coding protein_coding MGP_NODShiLtJ_T0089619.1 MGP_NODShiLtJ_G0033768.1 mouse_genomes_project 8 105123160 105181982 + MGP_NODShiLtJ_P0089619 Rspry1 protein_coding protein_coding MGP_NODShiLtJ_T0089620.1 MGP_NODShiLtJ_G0033768.1 mouse_genomes_project 8 105123183 105145112 + MGP_NODShiLtJ_P0089620 Rspry1 protein_coding protein_coding MGP_NODShiLtJ_T0089621.1 MGP_NODShiLtJ_G0033768.1 mouse_genomes_project 8 105148237 105151791 + Rspry1 protein_coding retained_intron MGP_NODShiLtJ_T0087961.1 MGP_NODShiLtJ_G0033253.1 mouse_genomes_project 8 21288191 21309187 - MGP_NODShiLtJ_P0087961 Ckap2 protein_coding protein_coding MGP_NODShiLtJ_T0099547.1 MGP_NODShiLtJ_G0037941.1 mouse_genomes_project 8 58157956 58158018 + Gm27964 snRNA snRNA MGP_NODShiLtJ_T0090319.1 MGP_NODShiLtJ_G0034014.1 mouse_genomes_project 8 135781709 135784428 + MGP_NODShiLtJ_P0090319 Foxl1 protein_coding protein_coding MGP_NODShiLtJ_T0005350.1 MGP_NODShiLtJ_G0004530.1 mouse_genomes_project 8 140215767 140218686 - Gm16237 antisense antisense MGP_NODShiLtJ_T0088287.1 MGP_NODShiLtJ_G0033364.1 mouse_genomes_project 8 42734658 42751184 + Pdgfrl protein_coding retained_intron MGP_NODShiLtJ_T0088288.1 MGP_NODShiLtJ_G0033364.1 mouse_genomes_project 8 42734674 42799728 + MGP_NODShiLtJ_P0088288 Pdgfrl protein_coding protein_coding MGP_NODShiLtJ_T0009016.1 MGP_NODShiLtJ_G0007244.1 mouse_genomes_project 8 43775314 44037149 + 2810404M03Rik lincRNA lincRNA MGP_NODShiLtJ_T0089548.1 MGP_NODShiLtJ_G0033746.1 mouse_genomes_project 8 103462971 103518216 - MGP_NODShiLtJ_P0089548 Ces1c protein_coding protein_coding MGP_NODShiLtJ_T0089549.1 MGP_NODShiLtJ_G0033746.1 mouse_genomes_project 8 103498633 103526978 - MGP_NODShiLtJ_P0089549 Ces1c protein_coding protein_coding MGP_NODShiLtJ_T0089550.1 MGP_NODShiLtJ_G0033746.1 mouse_genomes_project 8 103508799 103526990 - Ces1c protein_coding retained_intron MGP_NODShiLtJ_T0009055.1 MGP_NODShiLtJ_G0007279.1 mouse_genomes_project 8 97466803 97521503 + Gm2694 lincRNA lincRNA MGP_NODShiLtJ_T0009056.1 MGP_NODShiLtJ_G0007279.1 mouse_genomes_project 8 97466803 97521504 + Gm2694 lincRNA lincRNA MGP_NODShiLtJ_T0009057.1 MGP_NODShiLtJ_G0007279.1 mouse_genomes_project 8 97466803 97518133 + Gm2694 lincRNA lincRNA MGP_NODShiLtJ_T0009058.1 MGP_NODShiLtJ_G0007279.1 mouse_genomes_project 8 97466835 97521502 + Gm2694 lincRNA lincRNA MGP_NODShiLtJ_T0009059.1 MGP_NODShiLtJ_G0007279.1 mouse_genomes_project 8 97467107 97520958 + Gm2694 lincRNA lincRNA MGP_NODShiLtJ_T0009060.1 MGP_NODShiLtJ_G0007279.1 mouse_genomes_project 8 97467125 97521504 + Gm2694 lincRNA lincRNA MGP_NODShiLtJ_T0009061.1 MGP_NODShiLtJ_G0007279.1 mouse_genomes_project 8 97467148 97497580 + Gm2694 lincRNA lincRNA MGP_NODShiLtJ_T0087705.1 MGP_NODShiLtJ_G0033154.1 mouse_genomes_project 8 9426536 9550433 - MGP_NODShiLtJ_P0087705 Col4a1 protein_coding protein_coding MGP_NODShiLtJ_T0087706.1 MGP_NODShiLtJ_G0033154.1 mouse_genomes_project 8 9440516 9444917 - Col4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0015861.1 MGP_NODShiLtJ_G0013969.1 mouse_genomes_project 8 71056932 71057934 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088422.1 MGP_NODShiLtJ_G0033398.1 mouse_genomes_project 8 49577760 49695421 + MGP_NODShiLtJ_P0088422 Irf2 protein_coding protein_coding MGP_NODShiLtJ_T0099541.1 MGP_NODShiLtJ_G0037935.1 mouse_genomes_project 8 38225965 38226067 - Gm25126 snRNA snRNA MGP_NODShiLtJ_T0009045.1 MGP_NODShiLtJ_G0007270.1 mouse_genomes_project 8 96864617 96882462 + Gm27167 lincRNA lincRNA MGP_NODShiLtJ_T0005278.1 MGP_NODShiLtJ_G0004469.1 mouse_genomes_project 8 11462588 11469252 + Gm17023 antisense antisense MGP_NODShiLtJ_T0088281.1 MGP_NODShiLtJ_G0033362.1 mouse_genomes_project 8 42455340 42462638 + MGP_NODShiLtJ_P0088281 Adam24 protein_coding protein_coding MGP_NODShiLtJ_T0088110.1 MGP_NODShiLtJ_G0033297.1 mouse_genomes_project 8 25281512 25311625 - MGP_NODShiLtJ_P0088110 Ash2l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088111.1 MGP_NODShiLtJ_G0033297.1 mouse_genomes_project 8 25281858 25311632 - MGP_NODShiLtJ_P0088111 Ash2l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088112.1 MGP_NODShiLtJ_G0033297.1 mouse_genomes_project 8 25282388 25311620 - MGP_NODShiLtJ_P0088112 Ash2l protein_coding protein_coding MGP_NODShiLtJ_T0088113.1 MGP_NODShiLtJ_G0033297.1 mouse_genomes_project 8 25287734 25288561 - Ash2l protein_coding retained_intron MGP_NODShiLtJ_T0088114.1 MGP_NODShiLtJ_G0033297.1 mouse_genomes_project 8 25288129 25295342 - Ash2l protein_coding retained_intron MGP_NODShiLtJ_T0088115.1 MGP_NODShiLtJ_G0033297.1 mouse_genomes_project 8 25291978 25294798 - Ash2l protein_coding processed_transcript MGP_NODShiLtJ_T0015868.1 MGP_NODShiLtJ_G0013976.1 mouse_genomes_project 8 85890200 85892632 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089923.1 MGP_NODShiLtJ_G0033885.1 mouse_genomes_project 8 119554554 119565179 + MGP_NODShiLtJ_P0089923 Zfp90 protein_coding protein_coding MGP_NODShiLtJ_T0099542.1 MGP_NODShiLtJ_G0037936.1 mouse_genomes_project 8 45017243 45017349 + Gm26181 snRNA snRNA MGP_NODShiLtJ_T0089229.1 MGP_NODShiLtJ_G0033654.1 mouse_genomes_project 8 93770640 93783737 - MGP_NODShiLtJ_P0089229 Il27ra protein_coding protein_coding MGP_NODShiLtJ_T0087901.1 MGP_NODShiLtJ_G0033210.1 mouse_genomes_project 8 17573676 17629245 - MGP_NODShiLtJ_P0087901 Angpt2 protein_coding protein_coding MGP_NODShiLtJ_T0087902.1 MGP_NODShiLtJ_G0033210.1 mouse_genomes_project 8 17575504 17583885 - Angpt2 protein_coding processed_transcript MGP_NODShiLtJ_T0005303.1 MGP_NODShiLtJ_G0004489.1 mouse_genomes_project 8 67740718 67831489 - Gm16178 antisense antisense MGP_NODShiLtJ_T0100801.1 MGP_NODShiLtJ_G0039195.1 mouse_genomes_project 8 24050896 24051020 + Gm26208 snoRNA snoRNA MGP_NODShiLtJ_T0089757.1 MGP_NODShiLtJ_G0033819.1 mouse_genomes_project 8 117532131 117535387 - MGP_NODShiLtJ_P0089757 Rrad protein_coding protein_coding MGP_NODShiLtJ_T0088680.1 MGP_NODShiLtJ_G0033479.1 mouse_genomes_project 8 77932593 77942494 - MGP_NODShiLtJ_P0088680 Zfp963 protein_coding protein_coding MGP_NODShiLtJ_T0088682.1 MGP_NODShiLtJ_G0033479.1 mouse_genomes_project 8 77933886 77942502 - MGP_NODShiLtJ_P0088682 Zfp963 protein_coding protein_coding MGP_NODShiLtJ_T0018323.1 MGP_NODShiLtJ_G0015588.1 mouse_genomes_project 8 106393204 106410123 + 4930513N10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018324.1 MGP_NODShiLtJ_G0015588.1 mouse_genomes_project 8 106393347 106396588 + 4930513N10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018325.1 MGP_NODShiLtJ_G0015588.1 mouse_genomes_project 8 106395407 106410092 + 4930513N10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0002277.1 MGP_NODShiLtJ_G0002188.1 mouse_genomes_project 8 1585719 1585933 - TEC TEC MGP_NODShiLtJ_T0089881.1 MGP_NODShiLtJ_G0033871.1 mouse_genomes_project 8 119029112 119031777 - MGP_NODShiLtJ_P0089881 Psmb10 protein_coding protein_coding MGP_NODShiLtJ_T0088246.1 MGP_NODShiLtJ_G0033352.1 mouse_genomes_project 8 37847927 37849854 + MGP_NODShiLtJ_P0088246 AI429214 protein_coding protein_coding MGP_NODShiLtJ_T0100811.1 MGP_NODShiLtJ_G0039205.1 mouse_genomes_project 8 48289125 48289257 - Gm23604 snoRNA snoRNA MGP_NODShiLtJ_T0088328.1 MGP_NODShiLtJ_G0033378.1 mouse_genomes_project 8 47891058 47912964 - MGP_NODShiLtJ_P0088328 F11 protein_coding protein_coding MGP_NODShiLtJ_T0087969.1 MGP_NODShiLtJ_G0033257.1 mouse_genomes_project 8 21515755 21538796 - MGP_NODShiLtJ_P0087969 Slc25a15 protein_coding protein_coding MGP_NODShiLtJ_T0088136.1 MGP_NODShiLtJ_G0033307.1 mouse_genomes_project 8 26681329 26694966 + MGP_NODShiLtJ_P0088136 Prosc protein_coding protein_coding MGP_NODShiLtJ_T0088137.1 MGP_NODShiLtJ_G0033307.1 mouse_genomes_project 8 26681329 26689075 + MGP_NODShiLtJ_P0088137 Prosc protein_coding protein_coding MGP_NODShiLtJ_T0005312.1 MGP_NODShiLtJ_G0004497.1 mouse_genomes_project 8 77213038 77213752 + antisense antisense MGP_NODShiLtJ_T0089806.1 MGP_NODShiLtJ_G0033837.1 mouse_genomes_project 8 118301160 118306653 + MGP_NODShiLtJ_P0089806 Nol3 protein_coding protein_coding MGP_NODShiLtJ_T0090386.1 MGP_NODShiLtJ_G0034028.1 mouse_genomes_project 8 137129297 137137465 - MGP_NODShiLtJ_P0090386 Cyba protein_coding protein_coding MGP_NODShiLtJ_T0102226.1 MGP_NODShiLtJ_G0040392.1 mouse_genomes_project 8 18456366 20815085 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0090221.1 MGP_NODShiLtJ_G0033989.1 mouse_genomes_project 8 134066165 134086167 - MGP_NODShiLtJ_P0090221 Hsdl1 protein_coding protein_coding MGP_NODShiLtJ_T0015873.1 MGP_NODShiLtJ_G0013981.1 mouse_genomes_project 8 90304038 90306782 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090190.1 MGP_NODShiLtJ_G0033978.1 mouse_genomes_project 8 131851912 132007476 + MGP_NODShiLtJ_P0090190 Plcg2 protein_coding protein_coding MGP_NODShiLtJ_T0088695.1 MGP_NODShiLtJ_G0033484.1 mouse_genomes_project 8 78011939 78020584 + MGP_NODShiLtJ_P0088695 Lpar2 protein_coding protein_coding MGP_NODShiLtJ_T0088696.1 MGP_NODShiLtJ_G0033484.1 mouse_genomes_project 8 78012075 78020585 + MGP_NODShiLtJ_P0088696 Lpar2 protein_coding protein_coding MGP_NODShiLtJ_T0088865.1 MGP_NODShiLtJ_G0033533.1 mouse_genomes_project 8 79085365 79098341 + MGP_NODShiLtJ_P0088865 Il12rb1 protein_coding protein_coding MGP_NODShiLtJ_T0088181.1 MGP_NODShiLtJ_G0033331.1 mouse_genomes_project 8 34151453 34174760 - MGP_NODShiLtJ_P0088181 Ubxn8 protein_coding protein_coding MGP_NODShiLtJ_T0089047.1 MGP_NODShiLtJ_G0033594.1 mouse_genomes_project 8 81036197 81051344 + MGP_NODShiLtJ_P0089047 Tmem38a protein_coding protein_coding MGP_NODShiLtJ_T0088477.1 MGP_NODShiLtJ_G0033418.1 mouse_genomes_project 8 59551447 59570014 + MGP_NODShiLtJ_P0088477 Spata4 protein_coding protein_coding MGP_NODShiLtJ_T0089473.1 MGP_NODShiLtJ_G0033721.1 mouse_genomes_project 8 98175225 98211242 + MGP_NODShiLtJ_P0089473 Heatr3 protein_coding protein_coding MGP_NODShiLtJ_T0089474.1 MGP_NODShiLtJ_G0033721.1 mouse_genomes_project 8 98175226 98211212 + MGP_NODShiLtJ_P0089474 Heatr3 protein_coding protein_coding MGP_NODShiLtJ_T0089475.1 MGP_NODShiLtJ_G0033721.1 mouse_genomes_project 8 98196464 98198149 + Heatr3 protein_coding retained_intron MGP_NODShiLtJ_T0089476.1 MGP_NODShiLtJ_G0033721.1 mouse_genomes_project 8 98200902 98211242 + Heatr3 protein_coding retained_intron MGP_NODShiLtJ_T0089477.1 MGP_NODShiLtJ_G0033721.1 mouse_genomes_project 8 98203858 98206207 + Heatr3 protein_coding retained_intron MGP_NODShiLtJ_T0089035.1 MGP_NODShiLtJ_G0033588.1 mouse_genomes_project 8 80874299 80895720 - MGP_NODShiLtJ_P0089035 Calr3 protein_coding protein_coding MGP_NODShiLtJ_T0089036.1 MGP_NODShiLtJ_G0033588.1 mouse_genomes_project 8 80874306 80884565 - MGP_NODShiLtJ_P0089036 Calr3 protein_coding protein_coding MGP_NODShiLtJ_T0100825.1 MGP_NODShiLtJ_G0039219.1 mouse_genomes_project 8 78333710 78333836 - Gm25906 snoRNA snoRNA MGP_NODShiLtJ_T0089551.1 MGP_NODShiLtJ_G0033747.1 mouse_genomes_project 8 103566086 103599907 - MGP_NODShiLtJ_P0089551 Ces1d protein_coding protein_coding MGP_NODShiLtJ_T0089552.1 MGP_NODShiLtJ_G0033747.1 mouse_genomes_project 8 103566321 103570793 - Ces1d protein_coding processed_transcript MGP_NODShiLtJ_T0089553.1 MGP_NODShiLtJ_G0033747.1 mouse_genomes_project 8 103566347 103577113 - Ces1d protein_coding processed_transcript MGP_NODShiLtJ_T0089554.1 MGP_NODShiLtJ_G0033747.1 mouse_genomes_project 8 103596873 103599846 - Ces1d protein_coding processed_transcript MGP_NODShiLtJ_T0015826.1 MGP_NODShiLtJ_G0013934.1 mouse_genomes_project 8 11408993 11409263 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015886.1 MGP_NODShiLtJ_G0013994.1 mouse_genomes_project 8 105367841 105368640 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0088151.1 MGP_NODShiLtJ_G0033315.1 mouse_genomes_project 8 27118427 27130241 - MGP_NODShiLtJ_P0088151 Chrna6 protein_coding protein_coding MGP_NODShiLtJ_T0088926.1 MGP_NODShiLtJ_G0033555.1 mouse_genomes_project 8 79788546 79795381 - MGP_NODShiLtJ_P0088926 Abhd8 protein_coding protein_coding MGP_NODShiLtJ_T0088707.1 MGP_NODShiLtJ_G0033487.1 mouse_genomes_project 8 78080049 78094982 - MGP_NODShiLtJ_P0088707 Yjefn3 protein_coding protein_coding MGP_NODShiLtJ_T0088708.1 MGP_NODShiLtJ_G0033487.1 mouse_genomes_project 8 78080049 78083229 - MGP_NODShiLtJ_P0088708 Yjefn3 protein_coding protein_coding MGP_NODShiLtJ_T0088709.1 MGP_NODShiLtJ_G0033487.1 mouse_genomes_project 8 78080051 78080447 - Yjefn3 protein_coding processed_transcript MGP_NODShiLtJ_T0088710.1 MGP_NODShiLtJ_G0033487.1 mouse_genomes_project 8 78080078 78086236 - MGP_NODShiLtJ_P0088710 Yjefn3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089413.1 MGP_NODShiLtJ_G0033701.1 mouse_genomes_project 8 94944667 94957959 - MGP_NODShiLtJ_P0089413 Zfp791 protein_coding protein_coding MGP_NODShiLtJ_T0005331.1 MGP_NODShiLtJ_G0004512.1 mouse_genomes_project 8 124331651 124337093 + Gm15894 antisense antisense MGP_NODShiLtJ_T0087854.1 MGP_NODShiLtJ_G0033200.1 mouse_genomes_project 8 12583989 12586119 + MGP_NODShiLtJ_P0087854 protein_coding protein_coding MGP_NODShiLtJ_T0100805.1 MGP_NODShiLtJ_G0039199.1 mouse_genomes_project 8 34231990 34232134 + Gm24727 snoRNA snoRNA MGP_NODShiLtJ_T0099561.1 MGP_NODShiLtJ_G0037955.1 mouse_genomes_project 8 99721910 99722017 - Gm26331 snRNA snRNA MGP_NODShiLtJ_T0100820.1 MGP_NODShiLtJ_G0039214.1 mouse_genomes_project 8 71197014 71197145 + Gm24580 snoRNA snoRNA MGP_NODShiLtJ_T0088725.1 MGP_NODShiLtJ_G0033496.1 mouse_genomes_project 8 78341480 78349866 - MGP_NODShiLtJ_P0088725 Rfxank protein_coding protein_coding MGP_NODShiLtJ_T0088727.1 MGP_NODShiLtJ_G0033496.1 mouse_genomes_project 8 78344061 78349891 - MGP_NODShiLtJ_P0088727 Rfxank protein_coding unknown_likely_coding MGP_NODShiLtJ_T0088967.1 MGP_NODShiLtJ_G0033568.1 mouse_genomes_project 8 79955855 79969703 + MGP_NODShiLtJ_P0088967 Colgalt1 protein_coding protein_coding MGP_NODShiLtJ_T0100831.1 MGP_NODShiLtJ_G0039225.1 mouse_genomes_project 8 94149366 94149499 - Gm23626 snoRNA snoRNA MGP_NODShiLtJ_T0089777.1 MGP_NODShiLtJ_G0033829.1 mouse_genomes_project 8 118019332 118075940 + MGP_NODShiLtJ_P0089777 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090349.1 MGP_NODShiLtJ_G0034021.1 mouse_genomes_project 8 136564591 136591267 - MGP_NODShiLtJ_P0090349 Slc7a5 protein_coding protein_coding MGP_NODShiLtJ_T0090350.1 MGP_NODShiLtJ_G0034021.1 mouse_genomes_project 8 136566244 136567357 - Slc7a5 protein_coding retained_intron MGP_NODShiLtJ_T0090351.1 MGP_NODShiLtJ_G0034021.1 mouse_genomes_project 8 136571816 136579934 - Slc7a5 protein_coding processed_transcript MGP_NODShiLtJ_T0088125.1 MGP_NODShiLtJ_G0033303.1 mouse_genomes_project 8 25620869 25642897 + MGP_NODShiLtJ_P0088125 protein_coding protein_coding MGP_NODShiLtJ_T0088126.1 MGP_NODShiLtJ_G0033303.1 mouse_genomes_project 8 25620874 25631190 + MGP_NODShiLtJ_P0088126 protein_coding protein_coding MGP_NODShiLtJ_T0088127.1 MGP_NODShiLtJ_G0033303.1 mouse_genomes_project 8 25620962 25631581 + MGP_NODShiLtJ_P0088127 protein_coding protein_coding MGP_NODShiLtJ_T0088128.1 MGP_NODShiLtJ_G0033303.1 mouse_genomes_project 8 25621150 25631190 + MGP_NODShiLtJ_P0088128 protein_coding protein_coding MGP_NODShiLtJ_T0088129.1 MGP_NODShiLtJ_G0033303.1 mouse_genomes_project 8 25621966 25628065 + MGP_NODShiLtJ_P0088129 protein_coding protein_coding MGP_NODShiLtJ_T0089962.1 MGP_NODShiLtJ_G0033901.1 mouse_genomes_project 8 120370582 120410207 + MGP_NODShiLtJ_P0089962 Cyb5b protein_coding protein_coding MGP_NODShiLtJ_T0088522.1 MGP_NODShiLtJ_G0033433.1 mouse_genomes_project 8 67031548 67108314 - MGP_NODShiLtJ_P0088522 Gm10283 protein_coding protein_coding MGP_NODShiLtJ_T0089795.1 MGP_NODShiLtJ_G0033834.1 mouse_genomes_project 8 118281653 118289323 - MGP_NODShiLtJ_P0089795 Tradd protein_coding protein_coding MGP_NODShiLtJ_T0089796.1 MGP_NODShiLtJ_G0033834.1 mouse_genomes_project 8 118282557 118283488 - Tradd protein_coding retained_intron MGP_NODShiLtJ_T0089797.1 MGP_NODShiLtJ_G0033834.1 mouse_genomes_project 8 118282650 118289295 - MGP_NODShiLtJ_P0089797 Tradd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089798.1 MGP_NODShiLtJ_G0033834.1 mouse_genomes_project 8 118283124 118289317 - MGP_NODShiLtJ_P0089798 Tradd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009014.1 MGP_NODShiLtJ_G0007242.1 mouse_genomes_project 8 36311888 36318166 - Gm16793 lincRNA lincRNA MGP_NODShiLtJ_T0089812.1 MGP_NODShiLtJ_G0033842.1 mouse_genomes_project 8 118342192 118351956 - MGP_NODShiLtJ_P0089812 protein_coding protein_coding MGP_NODShiLtJ_T0088135.1 MGP_NODShiLtJ_G0033306.1 mouse_genomes_project 8 26662061 26678129 + MGP_NODShiLtJ_P0088135 Erlin2 protein_coding protein_coding MGP_NODShiLtJ_T0088895.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79695495 79698377 + MGP_NODShiLtJ_P0088895 Use1 protein_coding protein_coding MGP_NODShiLtJ_T0088896.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79695589 79698380 + MGP_NODShiLtJ_P0088896 Use1 protein_coding protein_coding MGP_NODShiLtJ_T0088897.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79695652 79696454 + MGP_NODShiLtJ_P0088897 Use1 protein_coding protein_coding MGP_NODShiLtJ_T0088898.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79695864 79698380 + Use1 protein_coding retained_intron MGP_NODShiLtJ_T0088899.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79695864 79698380 + Use1 protein_coding retained_intron MGP_NODShiLtJ_T0088900.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79695864 79698380 + MGP_NODShiLtJ_P0088900 Use1 protein_coding protein_coding MGP_NODShiLtJ_T0088901.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79695890 79697479 + Use1 protein_coding retained_intron MGP_NODShiLtJ_T0088902.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79695890 79697646 + Use1 protein_coding retained_intron MGP_NODShiLtJ_T0088903.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79696031 79697333 + Use1 protein_coding retained_intron MGP_NODShiLtJ_T0088904.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79696288 79696862 + Use1 protein_coding retained_intron MGP_NODShiLtJ_T0088905.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79696427 79698380 + Use1 protein_coding retained_intron MGP_NODShiLtJ_T0088906.1 MGP_NODShiLtJ_G0033549.1 mouse_genomes_project 8 79697439 79698319 + Use1 protein_coding retained_intron MGP_NODShiLtJ_T0100838.1 MGP_NODShiLtJ_G0039232.1 mouse_genomes_project 8 106339953 106340086 - Gm26265 snoRNA snoRNA MGP_NODShiLtJ_T0005339.1 MGP_NODShiLtJ_G0004520.1 mouse_genomes_project 8 131332973 131340136 + Gm15395 antisense antisense MGP_NODShiLtJ_T0090335.1 MGP_NODShiLtJ_G0034019.1 mouse_genomes_project 8 136417066 136479018 + Jph3 protein_coding processed_transcript MGP_NODShiLtJ_T0090336.1 MGP_NODShiLtJ_G0034019.1 mouse_genomes_project 8 136419860 136480219 + MGP_NODShiLtJ_P0090336 Jph3 protein_coding protein_coding MGP_NODShiLtJ_T0090337.1 MGP_NODShiLtJ_G0034019.1 mouse_genomes_project 8 136419864 136483684 + MGP_NODShiLtJ_P0090337 Jph3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090338.1 MGP_NODShiLtJ_G0034019.1 mouse_genomes_project 8 136442871 136471967 + Jph3 protein_coding retained_intron MGP_NODShiLtJ_T0087732.1 MGP_NODShiLtJ_G0033163.1 mouse_genomes_project 8 10135118 10152909 + MGP_NODShiLtJ_P0087732 Tex29 protein_coding protein_coding MGP_NODShiLtJ_T0087733.1 MGP_NODShiLtJ_G0033163.1 mouse_genomes_project 8 10135255 10139977 + Tex29 protein_coding processed_transcript MGP_NODShiLtJ_T0087734.1 MGP_NODShiLtJ_G0033163.1 mouse_genomes_project 8 10135563 10152853 + MGP_NODShiLtJ_P0087734 Tex29 protein_coding protein_coding MGP_NODShiLtJ_T0087735.1 MGP_NODShiLtJ_G0033163.1 mouse_genomes_project 8 10136705 10152905 + Tex29 protein_coding processed_transcript MGP_NODShiLtJ_T0102227.1 MGP_NODShiLtJ_G0040393.1 mouse_genomes_project 8 18526551 18528433 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0090228.1 MGP_NODShiLtJ_G0033992.1 mouse_genomes_project 8 134128200 134132412 + MGP_NODShiLtJ_P0090228 Adad2 protein_coding protein_coding MGP_NODShiLtJ_T0089720.1 MGP_NODShiLtJ_G0033801.1 mouse_genomes_project 8 115169563 115364549 - MGP_NODShiLtJ_P0089720 Cdh11 protein_coding protein_coding MGP_NODShiLtJ_T0009102.1 MGP_NODShiLtJ_G0007306.1 mouse_genomes_project 8 135197320 135203053 + Gm10614 lincRNA lincRNA MGP_NODShiLtJ_T0100819.1 MGP_NODShiLtJ_G0039213.1 mouse_genomes_project 8 70087270 70087404 - Gm24236 snoRNA snoRNA MGP_NODShiLtJ_T0099574.1 MGP_NODShiLtJ_G0037968.1 mouse_genomes_project 8 129716848 129716952 - Gm23677 snRNA snRNA MGP_NODShiLtJ_T0015893.1 MGP_NODShiLtJ_G0014001.1 mouse_genomes_project 8 120237020 120237897 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089926.1 MGP_NODShiLtJ_G0033888.1 mouse_genomes_project 8 119760061 119828868 + MGP_NODShiLtJ_P0089926 Cdh1 protein_coding protein_coding MGP_NODShiLtJ_T0089927.1 MGP_NODShiLtJ_G0033888.1 mouse_genomes_project 8 119760089 119827984 + MGP_NODShiLtJ_P0089927 Cdh1 protein_coding protein_coding MGP_NODShiLtJ_T0089928.1 MGP_NODShiLtJ_G0033888.1 mouse_genomes_project 8 119760853 119811218 + Cdh1 protein_coding processed_transcript MGP_NODShiLtJ_T0087976.1 MGP_NODShiLtJ_G0033262.1 mouse_genomes_project 8 21798452 21801968 + MGP_NODShiLtJ_P0087976 Dkk4 protein_coding protein_coding MGP_NODShiLtJ_T0088838.1 MGP_NODShiLtJ_G0033520.1 mouse_genomes_project 8 78876723 78880706 + MGP_NODShiLtJ_P0088838 Lrrc25 protein_coding protein_coding MGP_NODShiLtJ_T0099540.1 MGP_NODShiLtJ_G0037934.1 mouse_genomes_project 8 37196200 37196351 - Gm26150 snRNA snRNA MGP_NODShiLtJ_T0090178.1 MGP_NODShiLtJ_G0033973.1 mouse_genomes_project 8 131261065 131272631 - MGP_NODShiLtJ_P0090178 Gcsh protein_coding protein_coding MGP_NODShiLtJ_T0090179.1 MGP_NODShiLtJ_G0033973.1 mouse_genomes_project 8 131262393 131270523 - Gcsh protein_coding processed_transcript MGP_NODShiLtJ_T0088876.1 MGP_NODShiLtJ_G0033541.1 mouse_genomes_project 8 79228823 79230456 + MGP_NODShiLtJ_P0088876 protein_coding protein_coding MGP_NODShiLtJ_T0087721.1 MGP_NODShiLtJ_G0033160.1 mouse_genomes_project 8 9888425 9912614 - MGP_NODShiLtJ_P0087721 Ankrd10 protein_coding protein_coding MGP_NODShiLtJ_T0087722.1 MGP_NODShiLtJ_G0033160.1 mouse_genomes_project 8 9890993 9912614 - MGP_NODShiLtJ_P0087722 Ankrd10 protein_coding protein_coding MGP_NODShiLtJ_T0087617.1 MGP_NODShiLtJ_G0033124.1 mouse_genomes_project 8 744617 750204 - MGP_NODShiLtJ_P0087617 Cd209a protein_coding protein_coding MGP_NODShiLtJ_T0089823.1 MGP_NODShiLtJ_G0033845.1 mouse_genomes_project 8 118379391 118402352 + MGP_NODShiLtJ_P0089823 Slc9a5 protein_coding protein_coding MGP_NODShiLtJ_T0088017.1 MGP_NODShiLtJ_G0033272.1 mouse_genomes_project 8 22454068 22470733 - MGP_NODShiLtJ_P0088017 Golga7 protein_coding protein_coding MGP_NODShiLtJ_T0088018.1 MGP_NODShiLtJ_G0033272.1 mouse_genomes_project 8 22455819 22458732 - Golga7 protein_coding retained_intron MGP_NODShiLtJ_T0010849.1 MGP_NODShiLtJ_G0008982.1 mouse_genomes_project 8 22304595 22304720 - Gm44365 miRNA miRNA MGP_NODShiLtJ_T0088130.1 MGP_NODShiLtJ_G0033304.1 mouse_genomes_project 8 25662547 25667276 + MGP_NODShiLtJ_P0088130 Thap1 protein_coding protein_coding MGP_NODShiLtJ_T0088131.1 MGP_NODShiLtJ_G0033304.1 mouse_genomes_project 8 25662568 25667111 + MGP_NODShiLtJ_P0088131 Thap1 protein_coding protein_coding MGP_NODShiLtJ_T0088132.1 MGP_NODShiLtJ_G0033304.1 mouse_genomes_project 8 25662590 25663748 + Thap1 protein_coding retained_intron MGP_NODShiLtJ_T0088619.1 MGP_NODShiLtJ_G0033463.1 mouse_genomes_project 8 75451537 75476512 + MGP_NODShiLtJ_P0088619 Nat3 protein_coding protein_coding MGP_NODShiLtJ_T0011598.1 MGP_NODShiLtJ_G0009731.1 mouse_genomes_project 8 1316210 1316494 + Gm26102 misc_RNA misc_RNA MGP_NODShiLtJ_T0015839.1 MGP_NODShiLtJ_G0013947.1 mouse_genomes_project 8 20787961 20791710 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089625.1 MGP_NODShiLtJ_G0033771.1 mouse_genomes_project 8 105277927 105284023 + MGP_NODShiLtJ_P0089625 Ccl22 protein_coding protein_coding MGP_NODShiLtJ_T0089626.1 MGP_NODShiLtJ_G0033771.1 mouse_genomes_project 8 105278017 105282197 + Ccl22 protein_coding processed_transcript MGP_NODShiLtJ_T0088228.1 MGP_NODShiLtJ_G0033348.1 mouse_genomes_project 8 36872790 36926896 + MGP_NODShiLtJ_P0088228 D8Ertd82e protein_coding protein_coding MGP_NODShiLtJ_T0088229.1 MGP_NODShiLtJ_G0033348.1 mouse_genomes_project 8 36872823 36884580 + D8Ertd82e protein_coding retained_intron MGP_NODShiLtJ_T0088230.1 MGP_NODShiLtJ_G0033348.1 mouse_genomes_project 8 36872823 36880717 + D8Ertd82e protein_coding retained_intron MGP_NODShiLtJ_T0005285.1 MGP_NODShiLtJ_G0004475.1 mouse_genomes_project 8 21992344 21996135 + 1700041G16Rik antisense antisense MGP_NODShiLtJ_T0005286.1 MGP_NODShiLtJ_G0004475.1 mouse_genomes_project 8 21994876 21995334 + 1700041G16Rik antisense antisense MGP_NODShiLtJ_T0010888.1 MGP_NODShiLtJ_G0009021.1 mouse_genomes_project 8 98175569 98175637 + Mir7071 miRNA miRNA MGP_NODShiLtJ_T0089699.1 MGP_NODShiLtJ_G0033796.1 mouse_genomes_project 8 106295161 106296028 + Setd6 protein_coding processed_transcript MGP_NODShiLtJ_T0089700.1 MGP_NODShiLtJ_G0033796.1 mouse_genomes_project 8 106295178 106298243 + MGP_NODShiLtJ_P0089700 Setd6 protein_coding protein_coding MGP_NODShiLtJ_T0089701.1 MGP_NODShiLtJ_G0033796.1 mouse_genomes_project 8 106295408 106296484 + Setd6 protein_coding processed_transcript MGP_NODShiLtJ_T0089702.1 MGP_NODShiLtJ_G0033796.1 mouse_genomes_project 8 106295857 106297752 + Setd6 protein_coding processed_transcript MGP_NODShiLtJ_T0089703.1 MGP_NODShiLtJ_G0033796.1 mouse_genomes_project 8 106295866 106297299 + Setd6 protein_coding processed_transcript MGP_NODShiLtJ_T0089704.1 MGP_NODShiLtJ_G0033796.1 mouse_genomes_project 8 106296255 106298104 + Setd6 protein_coding processed_transcript MGP_NODShiLtJ_T0089555.1 MGP_NODShiLtJ_G0033748.1 mouse_genomes_project 8 103603698 103634960 - MGP_NODShiLtJ_P0089555 Ces1e protein_coding protein_coding MGP_NODShiLtJ_T0089556.1 MGP_NODShiLtJ_G0033748.1 mouse_genomes_project 8 103603884 103634959 - MGP_NODShiLtJ_P0089556 Ces1e protein_coding protein_coding MGP_NODShiLtJ_T0089557.1 MGP_NODShiLtJ_G0033748.1 mouse_genomes_project 8 103613073 103622264 - Ces1e protein_coding retained_intron MGP_NODShiLtJ_T0090610.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185071 142783317 + MGP_NODShiLtJ_P0090610 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090611.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185234 142601782 + MGP_NODShiLtJ_P0090611 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090612.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185234 142783633 + MGP_NODShiLtJ_P0090612 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090613.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185276 142579195 + Pard3 protein_coding retained_intron MGP_NODShiLtJ_T0090614.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185423 142783317 + MGP_NODShiLtJ_P0090614 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090615.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185437 142415048 + MGP_NODShiLtJ_P0090615 Pard3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090616.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185437 142535101 + MGP_NODShiLtJ_P0090616 Pard3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090617.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185473 142782152 + MGP_NODShiLtJ_P0090617 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090618.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185473 142782152 + MGP_NODShiLtJ_P0090618 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090619.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185523 142595711 + MGP_NODShiLtJ_P0090619 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090620.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185523 142783317 + MGP_NODShiLtJ_P0090620 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090621.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185523 142643055 + MGP_NODShiLtJ_P0090621 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090622.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185523 142595711 + MGP_NODShiLtJ_P0090622 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090623.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185523 142595711 + MGP_NODShiLtJ_P0090623 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090624.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185525 142595642 + MGP_NODShiLtJ_P0090624 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090625.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142185532 142569582 + MGP_NODShiLtJ_P0090625 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090626.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142195635 142595642 + MGP_NODShiLtJ_P0090626 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090627.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142437823 142602101 + MGP_NODShiLtJ_P0090627 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090628.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142521315 142526658 + Pard3 protein_coding retained_intron MGP_NODShiLtJ_T0090629.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142522211 142565627 + MGP_NODShiLtJ_P0090629 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090630.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142536218 142541697 + Pard3 protein_coding retained_intron MGP_NODShiLtJ_T0090631.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142554045 142567672 + MGP_NODShiLtJ_P0090631 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090632.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142571791 142602105 + MGP_NODShiLtJ_P0090632 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090633.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142577642 142642946 + Pard3 protein_coding retained_intron MGP_NODShiLtJ_T0090634.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142616702 142642962 + MGP_NODShiLtJ_P0090634 Pard3 protein_coding protein_coding MGP_NODShiLtJ_T0090635.1 MGP_NODShiLtJ_G0034102.1 mouse_genomes_project 8 142749816 142782195 + Pard3 protein_coding processed_transcript MGP_NODShiLtJ_T0089026.1 MGP_NODShiLtJ_G0033583.1 mouse_genomes_project 8 80635169 80643660 - MGP_NODShiLtJ_P0089026 Cib3 protein_coding protein_coding MGP_NODShiLtJ_T0015821.1 MGP_NODShiLtJ_G0013929.1 mouse_genomes_project 8 1935126 1935481 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089690.1 MGP_NODShiLtJ_G0033794.1 mouse_genomes_project 8 106209118 106222050 + MGP_NODShiLtJ_P0089690 Gins3 protein_coding protein_coding MGP_NODShiLtJ_T0089661.1 MGP_NODShiLtJ_G0033782.1 mouse_genomes_project 8 105609295 105632752 + MGP_NODShiLtJ_P0089661 Drc7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009022.1 MGP_NODShiLtJ_G0007250.1 mouse_genomes_project 8 63148854 63172077 + 2500002B13Rik lincRNA lincRNA MGP_NODShiLtJ_T0088565.1 MGP_NODShiLtJ_G0033442.1 mouse_genomes_project 8 68632661 68671135 + MGP_NODShiLtJ_P0088565 Ddx60 protein_coding protein_coding MGP_NODShiLtJ_T0088566.1 MGP_NODShiLtJ_G0033442.1 mouse_genomes_project 8 68632663 68752937 + MGP_NODShiLtJ_P0088566 Ddx60 protein_coding protein_coding MGP_NODShiLtJ_T0088567.1 MGP_NODShiLtJ_G0033442.1 mouse_genomes_project 8 68632663 68645941 + MGP_NODShiLtJ_P0088567 Ddx60 protein_coding protein_coding MGP_NODShiLtJ_T0088568.1 MGP_NODShiLtJ_G0033442.1 mouse_genomes_project 8 68632663 68752931 + MGP_NODShiLtJ_P0088568 Ddx60 protein_coding protein_coding MGP_NODShiLtJ_T0088569.1 MGP_NODShiLtJ_G0033442.1 mouse_genomes_project 8 68696636 68700847 + Ddx60 protein_coding retained_intron MGP_NODShiLtJ_T0088570.1 MGP_NODShiLtJ_G0033442.1 mouse_genomes_project 8 68736455 68738806 + Ddx60 protein_coding retained_intron MGP_NODShiLtJ_T0088571.1 MGP_NODShiLtJ_G0033442.1 mouse_genomes_project 8 68740016 68748419 + Ddx60 protein_coding retained_intron MGP_NODShiLtJ_T0087940.1 MGP_NODShiLtJ_G0033241.1 mouse_genomes_project 8 20950060 20953657 + MGP_NODShiLtJ_P0087940 Defb10 protein_coding protein_coding MGP_NODShiLtJ_T0100841.1 MGP_NODShiLtJ_G0039235.1 mouse_genomes_project 8 113707205 113707330 - Gm22223 snoRNA snoRNA MGP_NODShiLtJ_T0089173.1 MGP_NODShiLtJ_G0033639.1 mouse_genomes_project 8 93270730 93296359 - MGP_NODShiLtJ_P0089173 Tecr protein_coding protein_coding MGP_NODShiLtJ_T0089174.1 MGP_NODShiLtJ_G0033639.1 mouse_genomes_project 8 93270730 93296359 - MGP_NODShiLtJ_P0089174 Tecr protein_coding protein_coding MGP_NODShiLtJ_T0089175.1 MGP_NODShiLtJ_G0033639.1 mouse_genomes_project 8 93270730 93296297 - MGP_NODShiLtJ_P0089175 Tecr protein_coding protein_coding MGP_NODShiLtJ_T0011596.1 MGP_NODShiLtJ_G0009729.1 mouse_genomes_project 8 729506 729819 - Gm23886 misc_RNA misc_RNA MGP_NODShiLtJ_T0088062.1 MGP_NODShiLtJ_G0033286.1 mouse_genomes_project 8 24420261 24486555 - MGP_NODShiLtJ_P0088062 Plekha2 protein_coding protein_coding MGP_NODShiLtJ_T0088063.1 MGP_NODShiLtJ_G0033286.1 mouse_genomes_project 8 24421956 24486346 - MGP_NODShiLtJ_P0088063 Plekha2 protein_coding protein_coding MGP_NODShiLtJ_T0088064.1 MGP_NODShiLtJ_G0033286.1 mouse_genomes_project 8 24424606 24486133 - MGP_NODShiLtJ_P0088064 Plekha2 protein_coding protein_coding MGP_NODShiLtJ_T0088065.1 MGP_NODShiLtJ_G0033286.1 mouse_genomes_project 8 24445874 24475683 - MGP_NODShiLtJ_P0088065 Plekha2 protein_coding protein_coding MGP_NODShiLtJ_T0010860.1 MGP_NODShiLtJ_G0008993.1 mouse_genomes_project 8 72597429 72597513 - Gm23419 miRNA miRNA MGP_NODShiLtJ_T0090045.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124429728 124470159 + MGP_NODShiLtJ_P0090045 Cog4 protein_coding protein_coding MGP_NODShiLtJ_T0090046.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124429729 124436437 + MGP_NODShiLtJ_P0090046 Cog4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090047.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124429739 124435054 + MGP_NODShiLtJ_P0090047 Cog4 protein_coding protein_coding MGP_NODShiLtJ_T0090048.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124429744 124432982 + Cog4 protein_coding retained_intron MGP_NODShiLtJ_T0090049.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124429756 124436501 + Cog4 protein_coding processed_transcript MGP_NODShiLtJ_T0090050.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124429756 124436538 + MGP_NODShiLtJ_P0090050 Cog4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090051.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124429756 124436492 + MGP_NODShiLtJ_P0090051 Cog4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090052.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124429759 124469792 + MGP_NODShiLtJ_P0090052 Cog4 protein_coding protein_coding MGP_NODShiLtJ_T0090053.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124432579 124470148 + MGP_NODShiLtJ_P0090053 Cog4 protein_coding protein_coding MGP_NODShiLtJ_T0090054.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124443370 124452610 + Cog4 protein_coding retained_intron MGP_NODShiLtJ_T0090055.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124443525 124469792 + MGP_NODShiLtJ_P0090055 Cog4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090056.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124446651 124450206 + Cog4 protein_coding retained_intron MGP_NODShiLtJ_T0090057.1 MGP_NODShiLtJ_G0033932.1 mouse_genomes_project 8 124468184 124469683 + Cog4 protein_coding retained_intron MGP_NODShiLtJ_T0015883.1 MGP_NODShiLtJ_G0013991.1 mouse_genomes_project 8 99300293 99300908 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087695.1 MGP_NODShiLtJ_G0033147.1 mouse_genomes_project 8 6695182 6719158 - MGP_NODShiLtJ_P0087695 Arglu1 protein_coding protein_coding MGP_NODShiLtJ_T0005326.1 MGP_NODShiLtJ_G0004508.1 mouse_genomes_project 8 119027717 119039035 + Gm16156 antisense antisense MGP_NODShiLtJ_T0088430.1 MGP_NODShiLtJ_G0033401.1 mouse_genomes_project 8 50290425 50292656 + MGP_NODShiLtJ_P0088430 protein_coding protein_coding MGP_NODShiLtJ_T0088153.1 MGP_NODShiLtJ_G0033317.1 mouse_genomes_project 8 28564251 29171621 - MGP_NODShiLtJ_P0088153 Unc5d protein_coding protein_coding MGP_NODShiLtJ_T0088154.1 MGP_NODShiLtJ_G0033317.1 mouse_genomes_project 8 28570302 28786118 - MGP_NODShiLtJ_P0088154 Unc5d protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089226.1 MGP_NODShiLtJ_G0033653.1 mouse_genomes_project 8 93761919 93769542 + Palm3 protein_coding retained_intron MGP_NODShiLtJ_T0089227.1 MGP_NODShiLtJ_G0033653.1 mouse_genomes_project 8 93761919 93770649 + MGP_NODShiLtJ_P0089227 Palm3 protein_coding protein_coding MGP_NODShiLtJ_T0089228.1 MGP_NODShiLtJ_G0033653.1 mouse_genomes_project 8 93766501 93767476 + Palm3 protein_coding retained_intron MGP_NODShiLtJ_T0087815.1 MGP_NODShiLtJ_G0033181.1 mouse_genomes_project 8 11749007 11785933 + MGP_NODShiLtJ_P0087815 Tfdp1 protein_coding protein_coding MGP_NODShiLtJ_T0089075.1 MGP_NODShiLtJ_G0033603.1 mouse_genomes_project 8 83912177 83922410 + MGP_NODShiLtJ_P0089075 Rasd2 protein_coding protein_coding MGP_NODShiLtJ_T0089076.1 MGP_NODShiLtJ_G0033603.1 mouse_genomes_project 8 83912735 83920716 + MGP_NODShiLtJ_P0089076 Rasd2 protein_coding protein_coding MGP_NODShiLtJ_T0089840.1 MGP_NODShiLtJ_G0033850.1 mouse_genomes_project 8 118520016 118531847 - MGP_NODShiLtJ_P0089840 Zdhhc1 protein_coding protein_coding MGP_NODShiLtJ_T0088155.1 MGP_NODShiLtJ_G0033318.1 mouse_genomes_project 8 31368303 31377406 + MGP_NODShiLtJ_P0088155 Dusp26 protein_coding protein_coding MGP_NODShiLtJ_T0088156.1 MGP_NODShiLtJ_G0033318.1 mouse_genomes_project 8 31368468 31377405 + MGP_NODShiLtJ_P0088156 Dusp26 protein_coding protein_coding MGP_NODShiLtJ_T0088157.1 MGP_NODShiLtJ_G0033318.1 mouse_genomes_project 8 31368634 31372565 + Dusp26 protein_coding retained_intron MGP_NODShiLtJ_T0088158.1 MGP_NODShiLtJ_G0033318.1 mouse_genomes_project 8 31371982 31377405 + MGP_NODShiLtJ_P0088158 Dusp26 protein_coding protein_coding MGP_NODShiLtJ_T0088159.1 MGP_NODShiLtJ_G0033318.1 mouse_genomes_project 8 31374330 31376947 + Dusp26 protein_coding processed_transcript MGP_NODShiLtJ_T0089534.1 MGP_NODShiLtJ_G0033737.1 mouse_genomes_project 8 102135182 102138568 - MGP_NODShiLtJ_P0089534 Irx3 protein_coding protein_coding MGP_NODShiLtJ_T0089535.1 MGP_NODShiLtJ_G0033737.1 mouse_genomes_project 8 102135182 102138567 - MGP_NODShiLtJ_P0089535 Irx3 protein_coding protein_coding MGP_NODShiLtJ_T0090567.1 MGP_NODShiLtJ_G0034084.1 mouse_genomes_project 8 139816827 139845021 + MGP_NODShiLtJ_P0090567 Gnpat protein_coding protein_coding MGP_NODShiLtJ_T0090568.1 MGP_NODShiLtJ_G0034084.1 mouse_genomes_project 8 139816866 139841698 + MGP_NODShiLtJ_P0090568 Gnpat protein_coding protein_coding MGP_NODShiLtJ_T0090569.1 MGP_NODShiLtJ_G0034084.1 mouse_genomes_project 8 139838416 139842019 + Gnpat protein_coding retained_intron MGP_NODShiLtJ_T0090570.1 MGP_NODShiLtJ_G0034084.1 mouse_genomes_project 8 139838485 139844512 + Gnpat protein_coding retained_intron MGP_NODShiLtJ_T0090571.1 MGP_NODShiLtJ_G0034084.1 mouse_genomes_project 8 139840467 139841877 + Gnpat protein_coding retained_intron MGP_NODShiLtJ_T0090572.1 MGP_NODShiLtJ_G0034084.1 mouse_genomes_project 8 139842598 139844582 + Gnpat protein_coding retained_intron MGP_NODShiLtJ_T0088367.1 MGP_NODShiLtJ_G0033386.1 mouse_genomes_project 8 48691692 48720310 - MGP_NODShiLtJ_P0088367 1700029J07Rik protein_coding protein_coding MGP_NODShiLtJ_T0088368.1 MGP_NODShiLtJ_G0033386.1 mouse_genomes_project 8 48691694 48720310 - MGP_NODShiLtJ_P0088368 1700029J07Rik protein_coding protein_coding MGP_NODShiLtJ_T0005319.1 MGP_NODShiLtJ_G0004503.1 mouse_genomes_project 8 104880331 104888080 - Gm15890 antisense antisense MGP_NODShiLtJ_T0099549.1 MGP_NODShiLtJ_G0037943.1 mouse_genomes_project 8 66608432 66608539 + Gm26164 snRNA snRNA MGP_NODShiLtJ_T0089658.1 MGP_NODShiLtJ_G0033780.1 mouse_genomes_project 8 105519856 105559198 + MGP_NODShiLtJ_P0089658 Adgrg1 protein_coding protein_coding MGP_NODShiLtJ_T0089659.1 MGP_NODShiLtJ_G0033780.1 mouse_genomes_project 8 105528427 105559198 + MGP_NODShiLtJ_P0089659 Adgrg1 protein_coding protein_coding MGP_NODShiLtJ_T0008983.1 MGP_NODShiLtJ_G0007219.1 mouse_genomes_project 8 5221570 5275336 + Gm17215 lincRNA lincRNA MGP_NODShiLtJ_T0090121.1 MGP_NODShiLtJ_G0033949.1 mouse_genomes_project 8 125448889 125472454 - MGP_NODShiLtJ_P0090121 Bcar1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090122.1 MGP_NODShiLtJ_G0033949.1 mouse_genomes_project 8 125448906 125484252 - MGP_NODShiLtJ_P0090122 Bcar1 protein_coding protein_coding MGP_NODShiLtJ_T0089202.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93635691 93675052 + MGP_NODShiLtJ_P0089202 Adgrl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089203.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93635790 93676993 + MGP_NODShiLtJ_P0089203 Adgrl1 protein_coding protein_coding MGP_NODShiLtJ_T0089204.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93635832 93675052 + MGP_NODShiLtJ_P0089204 Adgrl1 protein_coding protein_coding MGP_NODShiLtJ_T0089205.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93635851 93675027 + MGP_NODShiLtJ_P0089205 Adgrl1 protein_coding protein_coding MGP_NODShiLtJ_T0089206.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93635851 93675027 + MGP_NODShiLtJ_P0089206 Adgrl1 protein_coding protein_coding MGP_NODShiLtJ_T0089207.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93658142 93665126 + Adgrl1 protein_coding processed_transcript MGP_NODShiLtJ_T0089209.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93669651 93672535 + Adgrl1 protein_coding retained_intron MGP_NODShiLtJ_T0089210.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93671193 93672868 + Adgrl1 protein_coding retained_intron MGP_NODShiLtJ_T0089211.1 MGP_NODShiLtJ_G0033646.1 mouse_genomes_project 8 93672694 93673905 + MGP_NODShiLtJ_P0089211 Adgrl1 protein_coding protein_coding MGP_NODShiLtJ_T0087740.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 10984171 11045408 - MGP_NODShiLtJ_P0087740 Tubgcp3 protein_coding protein_coding MGP_NODShiLtJ_T0087741.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 10984171 11045259 - MGP_NODShiLtJ_P0087741 Tubgcp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087742.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 10984173 11007920 - Tubgcp3 protein_coding retained_intron MGP_NODShiLtJ_T0087743.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 10985061 11007893 - Tubgcp3 protein_coding retained_intron MGP_NODShiLtJ_T0087744.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 10991704 11029374 - Tubgcp3 protein_coding retained_intron MGP_NODShiLtJ_T0087745.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 11000315 11045283 - Tubgcp3 protein_coding retained_intron MGP_NODShiLtJ_T0087746.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 11019848 11027656 - Tubgcp3 protein_coding retained_intron MGP_NODShiLtJ_T0087747.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 11024144 11029388 - MGP_NODShiLtJ_P0087747 Tubgcp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087748.1 MGP_NODShiLtJ_G0033168.1 mouse_genomes_project 8 11024179 11045119 - MGP_NODShiLtJ_P0087748 Tubgcp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087870.1 MGP_NODShiLtJ_G0033204.1 mouse_genomes_project 8 13465401 13566205 + MGP_NODShiLtJ_P0087870 Arhgef10 protein_coding protein_coding MGP_NODShiLtJ_T0087871.1 MGP_NODShiLtJ_G0033204.1 mouse_genomes_project 8 13465455 13482768 + Arhgef10 protein_coding retained_intron MGP_NODShiLtJ_T0087872.1 MGP_NODShiLtJ_G0033204.1 mouse_genomes_project 8 13465462 13523187 + MGP_NODShiLtJ_P0087872 Arhgef10 protein_coding protein_coding MGP_NODShiLtJ_T0087873.1 MGP_NODShiLtJ_G0033204.1 mouse_genomes_project 8 13465476 13566205 + MGP_NODShiLtJ_P0087873 Arhgef10 protein_coding protein_coding MGP_NODShiLtJ_T0087874.1 MGP_NODShiLtJ_G0033204.1 mouse_genomes_project 8 13505920 13566202 + MGP_NODShiLtJ_P0087874 Arhgef10 protein_coding protein_coding MGP_NODShiLtJ_T0087875.1 MGP_NODShiLtJ_G0033204.1 mouse_genomes_project 8 13555650 13556411 + Arhgef10 protein_coding processed_transcript MGP_NODShiLtJ_T0087876.1 MGP_NODShiLtJ_G0033204.1 mouse_genomes_project 8 13561292 13566194 + Arhgef10 protein_coding processed_transcript MGP_NODShiLtJ_T0088686.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 77997155 78010241 + MGP_NODShiLtJ_P0088686 Gmip protein_coding protein_coding MGP_NODShiLtJ_T0088687.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 77997166 78007343 + MGP_NODShiLtJ_P0088687 Gmip protein_coding protein_coding MGP_NODShiLtJ_T0088688.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 77998951 78002229 + Gmip protein_coding processed_transcript MGP_NODShiLtJ_T0088689.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 77999107 78000084 + Gmip protein_coding processed_transcript MGP_NODShiLtJ_T0088690.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 78001639 78002477 + Gmip protein_coding retained_intron MGP_NODShiLtJ_T0088691.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 78002260 78004607 + Gmip protein_coding processed_transcript MGP_NODShiLtJ_T0088692.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 78005082 78005962 + Gmip protein_coding retained_intron MGP_NODShiLtJ_T0088693.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 78006198 78007348 + MGP_NODShiLtJ_P0088693 Gmip protein_coding protein_coding MGP_NODShiLtJ_T0088694.1 MGP_NODShiLtJ_G0033483.1 mouse_genomes_project 8 78006434 78009704 + Gmip protein_coding processed_transcript MGP_NODShiLtJ_T0089423.1 MGP_NODShiLtJ_G0033707.1 mouse_genomes_project 8 95253360 95282161 - MGP_NODShiLtJ_P0089423 4921524J17Rik protein_coding protein_coding MGP_NODShiLtJ_T0087677.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1555853 1582472 + MGP_NODShiLtJ_P0087677 Cers4 protein_coding protein_coding MGP_NODShiLtJ_T0087678.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1555967 1579533 + MGP_NODShiLtJ_P0087678 Cers4 protein_coding protein_coding MGP_NODShiLtJ_T0087679.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1556026 1595488 + MGP_NODShiLtJ_P0087679 Cers4 protein_coding protein_coding MGP_NODShiLtJ_T0087680.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1556229 1587500 + MGP_NODShiLtJ_P0087680 Cers4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0087681.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1556276 1588930 + Cers4 protein_coding retained_intron MGP_NODShiLtJ_T0087682.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1556279 1588772 + MGP_NODShiLtJ_P0087682 Cers4 protein_coding protein_coding MGP_NODShiLtJ_T0087683.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1556285 1586275 + Cers4 protein_coding retained_intron MGP_NODShiLtJ_T0087684.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1556309 1586366 + Cers4 protein_coding retained_intron MGP_NODShiLtJ_T0087685.1 MGP_NODShiLtJ_G0033139.1 mouse_genomes_project 8 1556348 1584341 + Cers4 protein_coding retained_intron MGP_NODShiLtJ_T0088848.1 MGP_NODShiLtJ_G0033527.1 mouse_genomes_project 8 78995112 79018537 + MGP_NODShiLtJ_P0088848 Pde4c protein_coding protein_coding MGP_NODShiLtJ_T0088849.1 MGP_NODShiLtJ_G0033527.1 mouse_genomes_project 8 78995456 79023673 + MGP_NODShiLtJ_P0088849 Pde4c protein_coding protein_coding MGP_NODShiLtJ_T0088850.1 MGP_NODShiLtJ_G0033527.1 mouse_genomes_project 8 78995457 79023658 + MGP_NODShiLtJ_P0088850 Pde4c protein_coding protein_coding MGP_NODShiLtJ_T0088851.1 MGP_NODShiLtJ_G0033527.1 mouse_genomes_project 8 79002728 79018384 + Pde4c protein_coding processed_transcript MGP_NODShiLtJ_T0088852.1 MGP_NODShiLtJ_G0033527.1 mouse_genomes_project 8 79015569 79022960 + Pde4c protein_coding retained_intron MGP_NODShiLtJ_T0088853.1 MGP_NODShiLtJ_G0033527.1 mouse_genomes_project 8 79020377 79023300 + Pde4c protein_coding retained_intron MGP_NODShiLtJ_T0088106.1 MGP_NODShiLtJ_G0033293.1 mouse_genomes_project 8 25216658 25233493 + MGP_NODShiLtJ_P0088106 protein_coding protein_coding MGP_NODShiLtJ_T0015832.1 MGP_NODShiLtJ_G0013940.1 mouse_genomes_project 8 18206989 18207827 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010864.1 MGP_NODShiLtJ_G0008997.1 mouse_genomes_project 8 79185657 79185720 - Mir7067 miRNA miRNA MGP_NODShiLtJ_T0005296.1 MGP_NODShiLtJ_G0004483.1 mouse_genomes_project 8 48443632 48546851 - Sorbs2os antisense antisense MGP_NODShiLtJ_T0018333.1 MGP_NODShiLtJ_G0015593.1 mouse_genomes_project 8 137078198 137080616 + Gm20681 processed_transcript processed_transcript MGP_NODShiLtJ_T0090084.1 MGP_NODShiLtJ_G0033939.1 mouse_genomes_project 8 124721618 124767478 + MGP_NODShiLtJ_P0090084 Pdpr protein_coding protein_coding MGP_NODShiLtJ_T0090085.1 MGP_NODShiLtJ_G0033939.1 mouse_genomes_project 8 124721632 124765551 + MGP_NODShiLtJ_P0090085 Pdpr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0018331.1 MGP_NODShiLtJ_G0015592.1 mouse_genomes_project 8 124759361 124778300 - 9430091E24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018332.1 MGP_NODShiLtJ_G0015592.1 mouse_genomes_project 8 124759551 124778321 - 9430091E24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0090086.1 MGP_NODShiLtJ_G0033940.1 mouse_genomes_project 8 124788770 124899544 - MGP_NODShiLtJ_P0090086 Glg1 protein_coding protein_coding MGP_NODShiLtJ_T0090087.1 MGP_NODShiLtJ_G0033940.1 mouse_genomes_project 8 124791874 124813111 - MGP_NODShiLtJ_P0090087 Glg1 protein_coding protein_coding MGP_NODShiLtJ_T0090088.1 MGP_NODShiLtJ_G0033940.1 mouse_genomes_project 8 124791914 124899528 - MGP_NODShiLtJ_P0090088 Glg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090089.1 MGP_NODShiLtJ_G0033940.1 mouse_genomes_project 8 124792247 124899544 - MGP_NODShiLtJ_P0090089 Glg1 protein_coding protein_coding MGP_NODShiLtJ_T0089236.1 MGP_NODShiLtJ_G0033660.1 mouse_genomes_project 8 93874964 93881461 + MGP_NODShiLtJ_P0089236 Podnl1 protein_coding protein_coding MGP_NODShiLtJ_T0089237.1 MGP_NODShiLtJ_G0033660.1 mouse_genomes_project 8 93876793 93881450 + Podnl1 protein_coding retained_intron MGP_NODShiLtJ_T0100849.1 MGP_NODShiLtJ_G0039243.1 mouse_genomes_project 8 132530532 132530662 + Gm25200 snoRNA snoRNA MGP_NODShiLtJ_T0002296.1 MGP_NODShiLtJ_G0002206.1 mouse_genomes_project 8 136634266 136635065 - TEC TEC MGP_NODShiLtJ_T0087587.1 MGP_NODShiLtJ_G0033117.1 mouse_genomes_project 8 605188 607363 - Pcp2 protein_coding retained_intron MGP_NODShiLtJ_T0087588.1 MGP_NODShiLtJ_G0033117.1 mouse_genomes_project 8 605188 607363 - MGP_NODShiLtJ_P0087588 Pcp2 protein_coding protein_coding MGP_NODShiLtJ_T0087589.1 MGP_NODShiLtJ_G0033117.1 mouse_genomes_project 8 605194 607363 - Pcp2 protein_coding retained_intron MGP_NODShiLtJ_T0087590.1 MGP_NODShiLtJ_G0033117.1 mouse_genomes_project 8 605194 606820 - MGP_NODShiLtJ_P0087590 Pcp2 protein_coding protein_coding MGP_NODShiLtJ_T0087591.1 MGP_NODShiLtJ_G0033117.1 mouse_genomes_project 8 605194 607100 - MGP_NODShiLtJ_P0087591 Pcp2 protein_coding protein_coding MGP_NODShiLtJ_T0087592.1 MGP_NODShiLtJ_G0033117.1 mouse_genomes_project 8 605194 606867 - MGP_NODShiLtJ_P0087592 Pcp2 protein_coding protein_coding MGP_NODShiLtJ_T0087593.1 MGP_NODShiLtJ_G0033117.1 mouse_genomes_project 8 605197 607343 - Pcp2 protein_coding processed_transcript MGP_NODShiLtJ_T0089841.1 MGP_NODShiLtJ_G0033851.1 mouse_genomes_project 8 118567025 118572278 + MGP_NODShiLtJ_P0089841 Hsd11b2 protein_coding protein_coding MGP_NODShiLtJ_T0087618.1 MGP_NODShiLtJ_G0033125.1 mouse_genomes_project 8 854504 860849 - MGP_NODShiLtJ_P0087618 Cd209e protein_coding protein_coding MGP_NODShiLtJ_T0089171.1 MGP_NODShiLtJ_G0033638.1 mouse_genomes_project 8 93263113 93270657 + MGP_NODShiLtJ_P0089171 Ndufb7 protein_coding protein_coding MGP_NODShiLtJ_T0089172.1 MGP_NODShiLtJ_G0033638.1 mouse_genomes_project 8 93263200 93270657 + Ndufb7 protein_coding retained_intron MGP_NODShiLtJ_T0008995.1 MGP_NODShiLtJ_G0007227.1 mouse_genomes_project 8 21538895 21539771 + 1810012K16Rik lincRNA lincRNA MGP_NODShiLtJ_T0088143.1 MGP_NODShiLtJ_G0033310.1 mouse_genomes_project 8 26785340 26827607 - MGP_NODShiLtJ_P0088143 Rab11fip1 protein_coding protein_coding MGP_NODShiLtJ_T0088144.1 MGP_NODShiLtJ_G0033310.1 mouse_genomes_project 8 26785340 26827607 - MGP_NODShiLtJ_P0088144 Rab11fip1 protein_coding protein_coding MGP_NODShiLtJ_T0010920.1 MGP_NODShiLtJ_G0009053.1 mouse_genomes_project 8 137894777 137894844 + Mir7080 miRNA miRNA MGP_NODShiLtJ_T0089976.1 MGP_NODShiLtJ_G0033903.1 mouse_genomes_project 8 120671494 120687251 - MGP_NODShiLtJ_P0089976 Nqo1 protein_coding protein_coding MGP_NODShiLtJ_T0102223.1 MGP_NODShiLtJ_G0040389.1 mouse_genomes_project 8 18393360 18394343 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098100.1 MGP_NODShiLtJ_G0036512.1 mouse_genomes_project 8 129130877 129130977 - Gm22556 rRNA rRNA MGP_NODShiLtJ_T0089665.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105789474 105860485 - MGP_NODShiLtJ_P0089665 Cngb1 protein_coding protein_coding MGP_NODShiLtJ_T0089666.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105791409 105835317 - MGP_NODShiLtJ_P0089666 Cngb1 protein_coding protein_coding MGP_NODShiLtJ_T0089667.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105791415 105835337 - MGP_NODShiLtJ_P0089667 Cngb1 protein_coding protein_coding MGP_NODShiLtJ_T0089668.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105844528 105857743 - Cngb1 protein_coding retained_intron MGP_NODShiLtJ_T0089669.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105844528 105857743 - Cngb1 protein_coding retained_intron MGP_NODShiLtJ_T0089670.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105844528 105847592 - Cngb1 protein_coding retained_intron MGP_NODShiLtJ_T0089671.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105844528 105860485 - MGP_NODShiLtJ_P0089671 Cngb1 protein_coding protein_coding MGP_NODShiLtJ_T0089672.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105844528 105848005 - MGP_NODShiLtJ_P0089672 Cngb1 protein_coding protein_coding MGP_NODShiLtJ_T0089673.1 MGP_NODShiLtJ_G0033785.1 mouse_genomes_project 8 105844531 105860470 - Cngb1 protein_coding retained_intron MGP_NODShiLtJ_T0090499.1 MGP_NODShiLtJ_G0034059.1 mouse_genomes_project 8 138222298 138235399 + MGP_NODShiLtJ_P0090499 Tubb3 protein_coding protein_coding MGP_NODShiLtJ_T0089711.1 MGP_NODShiLtJ_G0033799.1 mouse_genomes_project 8 106455755 106483828 - MGP_NODShiLtJ_P0089711 Got2 protein_coding protein_coding MGP_NODShiLtJ_T0089712.1 MGP_NODShiLtJ_G0033799.1 mouse_genomes_project 8 106460088 106466313 - Got2 protein_coding processed_transcript MGP_NODShiLtJ_T0087844.1 MGP_NODShiLtJ_G0033195.1 mouse_genomes_project 8 12366658 12372336 - MGP_NODShiLtJ_P0087844 Coprs protein_coding protein_coding MGP_NODShiLtJ_T0097837.1 MGP_NODShiLtJ_G0036249.1 mouse_genomes_project 8 98175449 98175880 - pseudogene pseudogene MGP_NODShiLtJ_T0015867.1 MGP_NODShiLtJ_G0013975.1 mouse_genomes_project 8 85254487 85255495 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097839.1 MGP_NODShiLtJ_G0036251.1 mouse_genomes_project 8 105507423 105512504 - pseudogene pseudogene MGP_NODShiLtJ_T0089627.1 MGP_NODShiLtJ_G0033772.1 mouse_genomes_project 8 105304283 105311213 + Cx3cl1 protein_coding processed_transcript MGP_NODShiLtJ_T0089628.1 MGP_NODShiLtJ_G0033772.1 mouse_genomes_project 8 105304283 105314691 + MGP_NODShiLtJ_P0089628 Cx3cl1 protein_coding protein_coding MGP_NODShiLtJ_T0089629.1 MGP_NODShiLtJ_G0033772.1 mouse_genomes_project 8 105304479 105311906 + MGP_NODShiLtJ_P0089629 Cx3cl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089630.1 MGP_NODShiLtJ_G0033772.1 mouse_genomes_project 8 105304500 105312290 + MGP_NODShiLtJ_P0089630 Cx3cl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090401.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137192345 137266185 - MGP_NODShiLtJ_P0090401 Piezo1 protein_coding protein_coding MGP_NODShiLtJ_T0090402.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137192359 137210698 - MGP_NODShiLtJ_P0090402 Piezo1 protein_coding protein_coding MGP_NODShiLtJ_T0090403.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137192368 137195428 - Piezo1 protein_coding retained_intron MGP_NODShiLtJ_T0090404.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137192629 137265894 - MGP_NODShiLtJ_P0090404 Piezo1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090405.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137192629 137210697 - MGP_NODShiLtJ_P0090405 Piezo1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090406.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137192688 137193648 - Piezo1 protein_coding retained_intron MGP_NODShiLtJ_T0090407.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137192727 137193324 - Piezo1 protein_coding retained_intron MGP_NODShiLtJ_T0090408.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137194014 137194517 - Piezo1 protein_coding retained_intron MGP_NODShiLtJ_T0090409.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137195512 137196272 - Piezo1 protein_coding retained_intron MGP_NODShiLtJ_T0090410.1 MGP_NODShiLtJ_G0034033.1 mouse_genomes_project 8 137196571 137209016 - MGP_NODShiLtJ_P0090410 Piezo1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0005304.1 MGP_NODShiLtJ_G0004490.1 mouse_genomes_project 8 68546117 68627409 + 4930512H18Rik antisense antisense MGP_NODShiLtJ_T0009095.1 MGP_NODShiLtJ_G0007301.1 mouse_genomes_project 8 122509568 122706114 + D030068K23Rik lincRNA lincRNA MGP_NODShiLtJ_T0009096.1 MGP_NODShiLtJ_G0007301.1 mouse_genomes_project 8 122509569 122677549 + D030068K23Rik lincRNA lincRNA MGP_NODShiLtJ_T0009097.1 MGP_NODShiLtJ_G0007301.1 mouse_genomes_project 8 122700212 122730869 + D030068K23Rik lincRNA lincRNA MGP_NODShiLtJ_T0088796.1 MGP_NODShiLtJ_G0033509.1 mouse_genomes_project 8 78617099 78682961 - Crtc1 protein_coding retained_intron MGP_NODShiLtJ_T0088797.1 MGP_NODShiLtJ_G0033509.1 mouse_genomes_project 8 78617099 78682961 - MGP_NODShiLtJ_P0088797 Crtc1 protein_coding protein_coding MGP_NODShiLtJ_T0088798.1 MGP_NODShiLtJ_G0033509.1 mouse_genomes_project 8 78633064 78638072 - Crtc1 protein_coding retained_intron MGP_NODShiLtJ_T0088799.1 MGP_NODShiLtJ_G0033509.1 mouse_genomes_project 8 78640122 78682957 - Crtc1 protein_coding retained_intron MGP_NODShiLtJ_T0088800.1 MGP_NODShiLtJ_G0033509.1 mouse_genomes_project 8 78641400 78668806 - Crtc1 protein_coding processed_transcript MGP_NODShiLtJ_T0009047.1 MGP_NODShiLtJ_G0007272.1 mouse_genomes_project 8 97064254 97071935 + Gm5118 lincRNA lincRNA MGP_NODShiLtJ_T0005298.1 MGP_NODShiLtJ_G0004485.1 mouse_genomes_project 8 49885198 49896553 - 4930579M01Rik antisense antisense MGP_NODShiLtJ_T0087934.1 MGP_NODShiLtJ_G0033235.1 mouse_genomes_project 8 20782210 20783343 - MGP_NODShiLtJ_P0087934 protein_coding protein_coding MGP_NODShiLtJ_T0009069.1 MGP_NODShiLtJ_G0007285.1 mouse_genomes_project 8 102209651 102216863 + Gm28511 lincRNA lincRNA MGP_NODShiLtJ_T0087939.1 MGP_NODShiLtJ_G0033240.1 mouse_genomes_project 8 20928855 20934861 + MGP_NODShiLtJ_P0087939 Defb2 protein_coding protein_coding MGP_NODShiLtJ_T0089681.1 MGP_NODShiLtJ_G0033788.1 mouse_genomes_project 8 105886228 105897989 + Usb1 protein_coding retained_intron MGP_NODShiLtJ_T0089682.1 MGP_NODShiLtJ_G0033788.1 mouse_genomes_project 8 105886265 105901224 + MGP_NODShiLtJ_P0089682 Usb1 protein_coding protein_coding MGP_NODShiLtJ_T0089683.1 MGP_NODShiLtJ_G0033788.1 mouse_genomes_project 8 105898861 105900541 + Usb1 protein_coding retained_intron MGP_NODShiLtJ_T0089778.1 MGP_NODShiLtJ_G0033830.1 mouse_genomes_project 8 118140281 118163191 + MGP_NODShiLtJ_P0089778 Ces4a protein_coding protein_coding MGP_NODShiLtJ_T0100796.1 MGP_NODShiLtJ_G0039190.1 mouse_genomes_project 8 17383077 17383208 - Gm24469 snoRNA snoRNA MGP_NODShiLtJ_T0087883.1 MGP_NODShiLtJ_G0033207.1 mouse_genomes_project 8 13627903 13706343 + MGP_NODShiLtJ_P0087883 Myom2 protein_coding protein_coding MGP_NODShiLtJ_T0087884.1 MGP_NODShiLtJ_G0033207.1 mouse_genomes_project 8 13629038 13634003 + Myom2 protein_coding processed_transcript MGP_NODShiLtJ_T0087885.1 MGP_NODShiLtJ_G0033207.1 mouse_genomes_project 8 13630253 13645608 + Myom2 protein_coding retained_intron MGP_NODShiLtJ_T0087886.1 MGP_NODShiLtJ_G0033207.1 mouse_genomes_project 8 13674991 13680476 + Myom2 protein_coding retained_intron MGP_NODShiLtJ_T0087887.1 MGP_NODShiLtJ_G0033207.1 mouse_genomes_project 8 13691843 13703963 + Myom2 protein_coding processed_transcript MGP_NODShiLtJ_T0087974.1 MGP_NODShiLtJ_G0033261.1 mouse_genomes_project 8 21725363 21761980 - MGP_NODShiLtJ_P0087974 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0087975.1 MGP_NODShiLtJ_G0033261.1 mouse_genomes_project 8 21725425 21762032 - MGP_NODShiLtJ_P0087975 protein_coding protein_coding MGP_NODShiLtJ_T0089354.1 MGP_NODShiLtJ_G0033686.1 mouse_genomes_project 8 94757393 94768124 + MGP_NODShiLtJ_P0089354 Rtbdn protein_coding protein_coding MGP_NODShiLtJ_T0089355.1 MGP_NODShiLtJ_G0033686.1 mouse_genomes_project 8 94757393 94768124 + MGP_NODShiLtJ_P0089355 Rtbdn protein_coding protein_coding MGP_NODShiLtJ_T0089356.1 MGP_NODShiLtJ_G0033686.1 mouse_genomes_project 8 94760155 94768124 + MGP_NODShiLtJ_P0089356 Rtbdn protein_coding protein_coding MGP_NODShiLtJ_T0089357.1 MGP_NODShiLtJ_G0033686.1 mouse_genomes_project 8 94761476 94768032 + MGP_NODShiLtJ_P0089357 Rtbdn protein_coding protein_coding MGP_NODShiLtJ_T0088511.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 63463235 65000199 - MGP_NODShiLtJ_P0088511 Galntl6 protein_coding protein_coding MGP_NODShiLtJ_T0088512.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 63465395 63683940 - MGP_NODShiLtJ_P0088512 Galntl6 protein_coding protein_coding MGP_NODShiLtJ_T0088513.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 63465395 63486607 - MGP_NODShiLtJ_P0088513 Galntl6 protein_coding protein_coding MGP_NODShiLtJ_T0088514.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 63484913 63542283 - Galntl6 protein_coding processed_transcript MGP_NODShiLtJ_T0088515.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 64305418 64999186 - Galntl6 protein_coding retained_intron MGP_NODShiLtJ_T0088516.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 64305504 64999135 - MGP_NODShiLtJ_P0088516 Galntl6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088517.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 64305624 64692026 - MGP_NODShiLtJ_P0088517 Galntl6 protein_coding protein_coding MGP_NODShiLtJ_T0088518.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 64410648 64692051 - Galntl6 protein_coding processed_transcript MGP_NODShiLtJ_T0088519.1 MGP_NODShiLtJ_G0033431.1 mouse_genomes_project 8 64453440 64999419 - MGP_NODShiLtJ_P0088519 Galntl6 protein_coding protein_coding MGP_NODShiLtJ_T0005335.1 MGP_NODShiLtJ_G0004516.1 mouse_genomes_project 8 128634802 128638399 - Gm16116 antisense antisense MGP_NODShiLtJ_T0087997.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22172548 22356186 + MGP_NODShiLtJ_P0087997 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0087998.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22172586 22356747 + MGP_NODShiLtJ_P0087998 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0087999.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22173808 22354560 + MGP_NODShiLtJ_P0087999 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088000.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22235992 22355043 + MGP_NODShiLtJ_P0088000 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088001.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22236021 22355534 + MGP_NODShiLtJ_P0088001 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088002.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22236124 22355534 + MGP_NODShiLtJ_P0088002 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088003.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22260347 22356750 + MGP_NODShiLtJ_P0088003 Ank1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088004.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22260363 22356750 + MGP_NODShiLtJ_P0088004 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088005.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22260399 22356750 + MGP_NODShiLtJ_P0088005 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088006.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22260613 22355941 + MGP_NODShiLtJ_P0088006 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088007.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22260613 22355941 + MGP_NODShiLtJ_P0088007 Ank1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088008.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22298359 22329928 + MGP_NODShiLtJ_P0088008 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088009.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22327226 22333335 + Ank1 protein_coding retained_intron MGP_NODShiLtJ_T0088010.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22345318 22355532 + MGP_NODShiLtJ_P0088010 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088011.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22345393 22354947 + MGP_NODShiLtJ_P0088011 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088012.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22345565 22354558 + MGP_NODShiLtJ_P0088012 Ank1 protein_coding protein_coding MGP_NODShiLtJ_T0088013.1 MGP_NODShiLtJ_G0033268.1 mouse_genomes_project 8 22346381 22354622 + Ank1 protein_coding retained_intron MGP_NODShiLtJ_T0015856.1 MGP_NODShiLtJ_G0013964.1 mouse_genomes_project 8 50535919 50542238 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089768.1 MGP_NODShiLtJ_G0033823.1 mouse_genomes_project 8 117797272 117842097 + Ces2c protein_coding processed_transcript MGP_NODShiLtJ_T0089769.1 MGP_NODShiLtJ_G0033823.1 mouse_genomes_project 8 117797280 117845929 + MGP_NODShiLtJ_P0089769 Ces2c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089770.1 MGP_NODShiLtJ_G0033823.1 mouse_genomes_project 8 117844807 117846148 + Ces2c protein_coding processed_transcript MGP_NODShiLtJ_T0098162.1 MGP_NODShiLtJ_G0036574.1 mouse_genomes_project 8 77584672 77584968 + Gm25661 ribozyme ribozyme MGP_NODShiLtJ_T0010858.1 MGP_NODShiLtJ_G0008991.1 mouse_genomes_project 8 62046605 62046714 + Gm25992 miRNA miRNA MGP_NODShiLtJ_T0100816.1 MGP_NODShiLtJ_G0039210.1 mouse_genomes_project 8 63229519 63229633 + Gm25379 snoRNA snoRNA MGP_NODShiLtJ_T0090609.1 MGP_NODShiLtJ_G0034101.1 mouse_genomes_project 8 142047692 142074347 - MGP_NODShiLtJ_P0090609 Rbm34 protein_coding protein_coding MGP_NODShiLtJ_T0099558.1 MGP_NODShiLtJ_G0037952.1 mouse_genomes_project 8 95146259 95146366 + Gm22336 snRNA snRNA MGP_NODShiLtJ_T0010884.1 MGP_NODShiLtJ_G0009017.1 mouse_genomes_project 8 94892498 94892585 + Mir7070 miRNA miRNA MGP_NODShiLtJ_T0010895.1 MGP_NODShiLtJ_G0009028.1 mouse_genomes_project 8 115308033 115308128 - Gm26301 miRNA miRNA MGP_NODShiLtJ_T0008990.1 MGP_NODShiLtJ_G0007225.1 mouse_genomes_project 8 11080333 11093719 - Gm15348 lincRNA lincRNA MGP_NODShiLtJ_T0005266.1 MGP_NODShiLtJ_G0004461.1 mouse_genomes_project 8 697135 740267 + Gm16553 antisense antisense MGP_NODShiLtJ_T0087704.1 MGP_NODShiLtJ_G0033153.1 mouse_genomes_project 8 9195950 9217505 - MGP_NODShiLtJ_P0087704 Irs2 protein_coding protein_coding MGP_NODShiLtJ_T0090413.1 MGP_NODShiLtJ_G0034036.1 mouse_genomes_project 8 137294007 137332028 - MGP_NODShiLtJ_P0090413 Galns protein_coding protein_coding MGP_NODShiLtJ_T0099535.1 MGP_NODShiLtJ_G0037929.1 mouse_genomes_project 8 22009849 22009967 - Gm24735 snRNA snRNA MGP_NODShiLtJ_T0089374.1 MGP_NODShiLtJ_G0033689.1 mouse_genomes_project 8 94799168 94801009 - MGP_NODShiLtJ_P0089374 Junb protein_coding protein_coding MGP_NODShiLtJ_T0098094.1 MGP_NODShiLtJ_G0036506.1 mouse_genomes_project 8 50648530 50648654 + n-R5s96 rRNA rRNA MGP_NODShiLtJ_T0087820.1 MGP_NODShiLtJ_G0033185.1 mouse_genomes_project 8 11885999 11915175 - MGP_NODShiLtJ_P0087820 Gas6 protein_coding protein_coding MGP_NODShiLtJ_T0102218.1 MGP_NODShiLtJ_G0040384.1 mouse_genomes_project 8 211 2301 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0088375.1 MGP_NODShiLtJ_G0033388.1 mouse_genomes_project 8 48747218 48750184 - MGP_NODShiLtJ_P0088375 Ankrd37 protein_coding protein_coding MGP_NODShiLtJ_T0088376.1 MGP_NODShiLtJ_G0033388.1 mouse_genomes_project 8 48747227 48750184 - Ankrd37 protein_coding processed_transcript MGP_NODShiLtJ_T0088377.1 MGP_NODShiLtJ_G0033388.1 mouse_genomes_project 8 48747230 48749883 - Ankrd37 protein_coding retained_intron MGP_NODShiLtJ_T0088378.1 MGP_NODShiLtJ_G0033388.1 mouse_genomes_project 8 48747281 48748185 - Ankrd37 protein_coding processed_transcript MGP_NODShiLtJ_T0088379.1 MGP_NODShiLtJ_G0033388.1 mouse_genomes_project 8 48748448 48750166 - Ankrd37 protein_coding retained_intron MGP_NODShiLtJ_T0009044.1 MGP_NODShiLtJ_G0007269.1 mouse_genomes_project 8 96847822 96848701 + 2010110E17Rik lincRNA lincRNA MGP_NODShiLtJ_T0090465.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138040388 138052284 - Vps9d1 protein_coding retained_intron MGP_NODShiLtJ_T0090466.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138040388 138052238 - MGP_NODShiLtJ_P0090466 Vps9d1 protein_coding protein_coding MGP_NODShiLtJ_T0090467.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138040388 138052410 - MGP_NODShiLtJ_P0090467 Vps9d1 protein_coding protein_coding MGP_NODShiLtJ_T0090468.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138040390 138052225 - Vps9d1 protein_coding retained_intron MGP_NODShiLtJ_T0090469.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138040390 138052171 - MGP_NODShiLtJ_P0090469 Vps9d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090470.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138040391 138052154 - MGP_NODShiLtJ_P0090470 Vps9d1 protein_coding protein_coding MGP_NODShiLtJ_T0090471.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138042979 138052167 - Vps9d1 protein_coding retained_intron MGP_NODShiLtJ_T0090472.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138043175 138044963 - Vps9d1 protein_coding processed_transcript MGP_NODShiLtJ_T0090473.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138044548 138046029 - Vps9d1 protein_coding processed_transcript MGP_NODShiLtJ_T0090474.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138044889 138046046 - Vps9d1 protein_coding retained_intron MGP_NODShiLtJ_T0090475.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138046585 138047016 - Vps9d1 protein_coding retained_intron MGP_NODShiLtJ_T0090476.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138046860 138049104 - Vps9d1 protein_coding retained_intron MGP_NODShiLtJ_T0090477.1 MGP_NODShiLtJ_G0034053.1 mouse_genomes_project 8 138047744 138052112 - Vps9d1 protein_coding retained_intron MGP_NODShiLtJ_T0011619.1 MGP_NODShiLtJ_G0009752.1 mouse_genomes_project 8 135341866 135342121 - Gm24239 misc_RNA misc_RNA MGP_NODShiLtJ_T0088728.1 MGP_NODShiLtJ_G0033498.1 mouse_genomes_project 8 78350167 78360396 + MGP_NODShiLtJ_P0088728 protein_coding protein_coding MGP_NODShiLtJ_T0088729.1 MGP_NODShiLtJ_G0033498.1 mouse_genomes_project 8 78350375 78358675 + protein_coding retained_intron MGP_NODShiLtJ_T0088730.1 MGP_NODShiLtJ_G0033498.1 mouse_genomes_project 8 78350381 78358689 + MGP_NODShiLtJ_P0088730 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088731.1 MGP_NODShiLtJ_G0033498.1 mouse_genomes_project 8 78350391 78360401 + MGP_NODShiLtJ_P0088731 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0088732.1 MGP_NODShiLtJ_G0033498.1 mouse_genomes_project 8 78350945 78360459 + MGP_NODShiLtJ_P0088732 protein_coding protein_coding MGP_NODShiLtJ_T0010911.1 MGP_NODShiLtJ_G0009044.1 mouse_genomes_project 8 131800426 131800483 + Mir7077 miRNA miRNA MGP_NODShiLtJ_T0090167.1 MGP_NODShiLtJ_G0033967.1 mouse_genomes_project 8 130726806 130737833 + MGP_NODShiLtJ_P0090167 Dynlrb2 protein_coding protein_coding MGP_NODShiLtJ_T0018319.1 MGP_NODShiLtJ_G0015586.1 mouse_genomes_project 8 94882676 94890873 - A230103J11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018320.1 MGP_NODShiLtJ_G0015586.1 mouse_genomes_project 8 94882705 94890856 - A230103J11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0088948.1 MGP_NODShiLtJ_G0033561.1 mouse_genomes_project 8 79874366 79877521 - MGP_NODShiLtJ_P0088948 Bst2 protein_coding protein_coding MGP_NODShiLtJ_T0100806.1 MGP_NODShiLtJ_G0039200.1 mouse_genomes_project 8 40545258 40545391 - Gm23128 snoRNA snoRNA MGP_NODShiLtJ_T0090206.1 MGP_NODShiLtJ_G0033985.1 mouse_genomes_project 8 133931044 133939995 + MGP_NODShiLtJ_P0090206 Osgin1 protein_coding protein_coding MGP_NODShiLtJ_T0090207.1 MGP_NODShiLtJ_G0033985.1 mouse_genomes_project 8 133934042 133939934 + Osgin1 protein_coding processed_transcript MGP_NODShiLtJ_T0090208.1 MGP_NODShiLtJ_G0033985.1 mouse_genomes_project 8 133934078 133943179 + MGP_NODShiLtJ_P0090208 Osgin1 protein_coding protein_coding MGP_NODShiLtJ_T0090209.1 MGP_NODShiLtJ_G0033985.1 mouse_genomes_project 8 133934087 133943173 + Osgin1 protein_coding retained_intron MGP_NODShiLtJ_T0090210.1 MGP_NODShiLtJ_G0033985.1 mouse_genomes_project 8 133934109 133941974 + Osgin1 protein_coding retained_intron MGP_NODShiLtJ_T0009035.1 MGP_NODShiLtJ_G0007261.1 mouse_genomes_project 8 88523407 88535990 + Gm4890 lincRNA lincRNA MGP_NODShiLtJ_T0088219.1 MGP_NODShiLtJ_G0033340.1 mouse_genomes_project 8 34927342 34928921 + MGP_NODShiLtJ_P0088219 protein_coding protein_coding MGP_NODShiLtJ_T0015835.1 MGP_NODShiLtJ_G0013943.1 mouse_genomes_project 8 20153010 20178877 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009062.1 MGP_NODShiLtJ_G0007280.1 mouse_genomes_project 8 97470046 97489070 - Gm27016 lincRNA lincRNA MGP_NODShiLtJ_T0088837.1 MGP_NODShiLtJ_G0033519.1 mouse_genomes_project 8 78857366 78868190 - MGP_NODShiLtJ_P0088837 Ssbp4 protein_coding protein_coding MGP_NODShiLtJ_T0010870.1 MGP_NODShiLtJ_G0009003.1 mouse_genomes_project 8 93435093 93435200 - Mir1668 miRNA miRNA MGP_NODShiLtJ_T0008987.1 MGP_NODShiLtJ_G0007222.1 mouse_genomes_project 8 9725494 9727807 + E230013L22Rik lincRNA lincRNA MGP_NODShiLtJ_T0099577.1 MGP_NODShiLtJ_G0037971.1 mouse_genomes_project 8 137231156 137231263 - Gm26497 snRNA snRNA MGP_NODShiLtJ_T0100817.1 MGP_NODShiLtJ_G0039211.1 mouse_genomes_project 8 67408975 67409083 - Gm23329 snoRNA snoRNA MGP_NODShiLtJ_T0088223.1 MGP_NODShiLtJ_G0033344.1 mouse_genomes_project 8 36182024 36206428 - MGP_NODShiLtJ_P0088223 Eri1 protein_coding protein_coding MGP_NODShiLtJ_T0089392.1 MGP_NODShiLtJ_G0033697.1 mouse_genomes_project 8 94902648 94905918 + MGP_NODShiLtJ_P0089392 Dhps protein_coding protein_coding MGP_NODShiLtJ_T0089393.1 MGP_NODShiLtJ_G0033697.1 mouse_genomes_project 8 94902687 94905912 + MGP_NODShiLtJ_P0089393 Dhps protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089394.1 MGP_NODShiLtJ_G0033697.1 mouse_genomes_project 8 94902697 94903701 + Dhps protein_coding retained_intron MGP_NODShiLtJ_T0089395.1 MGP_NODShiLtJ_G0033697.1 mouse_genomes_project 8 94903192 94904334 + Dhps protein_coding retained_intron MGP_NODShiLtJ_T0089396.1 MGP_NODShiLtJ_G0033697.1 mouse_genomes_project 8 94903810 94904766 + Dhps protein_coding retained_intron MGP_NODShiLtJ_T0089397.1 MGP_NODShiLtJ_G0033697.1 mouse_genomes_project 8 94903810 94905907 + Dhps protein_coding retained_intron MGP_NODShiLtJ_T0089398.1 MGP_NODShiLtJ_G0033697.1 mouse_genomes_project 8 94904333 94905204 + Dhps protein_coding retained_intron MGP_NODShiLtJ_T0089399.1 MGP_NODShiLtJ_G0033697.1 mouse_genomes_project 8 94905454 94905907 + Dhps protein_coding retained_intron MGP_NODShiLtJ_T0010904.1 MGP_NODShiLtJ_G0009037.1 mouse_genomes_project 8 124068855 124068915 + miRNA miRNA MGP_NODShiLtJ_T0009082.1 MGP_NODShiLtJ_G0007292.1 mouse_genomes_project 8 104879017 104880717 + lincRNA lincRNA MGP_NODShiLtJ_T0015840.1 MGP_NODShiLtJ_G0013948.1 mouse_genomes_project 8 20909650 20910091 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015896.1 MGP_NODShiLtJ_G0014004.1 mouse_genomes_project 8 130723223 130724251 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087926.1 MGP_NODShiLtJ_G0033228.1 mouse_genomes_project 8 19952753 19957792 + MGP_NODShiLtJ_P0087926 Defb33 protein_coding protein_coding MGP_NODShiLtJ_T0088365.1 MGP_NODShiLtJ_G0033385.1 mouse_genomes_project 8 48675172 48684691 + MGP_NODShiLtJ_P0088365 Ccdc110 protein_coding protein_coding MGP_NODShiLtJ_T0088366.1 MGP_NODShiLtJ_G0033385.1 mouse_genomes_project 8 48675258 48682046 + MGP_NODShiLtJ_P0088366 Ccdc110 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0089865.1 MGP_NODShiLtJ_G0033862.1 mouse_genomes_project 8 118844702 118911988 - MGP_NODShiLtJ_P0089865 Ranbp10 protein_coding protein_coding MGP_NODShiLtJ_T0099559.1 MGP_NODShiLtJ_G0037953.1 mouse_genomes_project 8 96226029 96226127 + Gm24490 snRNA snRNA MGP_NODShiLtJ_T0088237.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37378296 37559370 - MGP_NODShiLtJ_P0088237 Dlc1 protein_coding protein_coding MGP_NODShiLtJ_T0088238.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37378296 37432528 - MGP_NODShiLtJ_P0088238 Dlc1 protein_coding protein_coding MGP_NODShiLtJ_T0088239.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37380774 37805630 - MGP_NODShiLtJ_P0088239 Dlc1 protein_coding protein_coding MGP_NODShiLtJ_T0088240.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37382729 37387701 - Dlc1 protein_coding retained_intron MGP_NODShiLtJ_T0088241.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37404144 37432459 - Dlc1 protein_coding retained_intron MGP_NODShiLtJ_T0088242.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37688698 37805545 - Dlc1 protein_coding retained_intron MGP_NODShiLtJ_T0088243.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37700436 37805610 - Dlc1 protein_coding retained_intron MGP_NODShiLtJ_T0088244.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37788814 37805624 - Dlc1 protein_coding retained_intron MGP_NODShiLtJ_T0088245.1 MGP_NODShiLtJ_G0033351.1 mouse_genomes_project 8 37791785 37806330 - MGP_NODShiLtJ_P0088245 Dlc1 protein_coding protein_coding MGP_NODShiLtJ_T0087970.1 MGP_NODShiLtJ_G0033258.1 mouse_genomes_project 8 21551600 21574312 + MGP_NODShiLtJ_P0087970 Mrps31 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0089735.1 MGP_NODShiLtJ_G0033811.1 mouse_genomes_project 8 117213848 117224290 + MGP_NODShiLtJ_P0089735 Cmtm3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0015901.1 MGP_NODShiLtJ_G0014009.1 mouse_genomes_project 8 142730285 142730720 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0087559.1 MGP_NODShiLtJ_G0033108.1 mouse_genomes_project 8 406704 419229 - MGP_NODShiLtJ_P0087559 Pex11g protein_coding protein_coding MGP_NODShiLtJ_T0087560.1 MGP_NODShiLtJ_G0033108.1 mouse_genomes_project 8 406707 419194 - MGP_NODShiLtJ_P0087560 Pex11g protein_coding protein_coding MGP_NODShiLtJ_T0087561.1 MGP_NODShiLtJ_G0033108.1 mouse_genomes_project 8 414766 419219 - MGP_NODShiLtJ_P0087561 Pex11g protein_coding protein_coding MGP_NODShiLtJ_T0089688.1 MGP_NODShiLtJ_G0033793.1 mouse_genomes_project 8 106114592 106144730 - MGP_NODShiLtJ_P0089688 Prss54 protein_coding protein_coding MGP_NODShiLtJ_T0089689.1 MGP_NODShiLtJ_G0033793.1 mouse_genomes_project 8 106114751 106144472 - MGP_NODShiLtJ_P0089689 Prss54 protein_coding protein_coding MGP_NODShiLtJ_T0015884.1 MGP_NODShiLtJ_G0013992.1 mouse_genomes_project 8 104916087 104916686 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0089301.1 MGP_NODShiLtJ_G0033672.1 mouse_genomes_project 8 94492983 94501250 - Nfix protein_coding processed_transcript MGP_NODShiLtJ_T0089303.1 MGP_NODShiLtJ_G0033672.1 mouse_genomes_project 8 94497817 94500748 - Nfix protein_coding processed_transcript MGP_NODShiLtJ_T0089304.1 MGP_NODShiLtJ_G0033672.1 mouse_genomes_project 8 94497818 94568698 - MGP_NODShiLtJ_P0089304 Nfix protein_coding protein_coding MGP_NODShiLtJ_T0089305.1 MGP_NODShiLtJ_G0033672.1 mouse_genomes_project 8 94501645 94597646 - MGP_NODShiLtJ_P0089305 Nfix protein_coding protein_coding MGP_NODShiLtJ_T0089306.1 MGP_NODShiLtJ_G0033672.1 mouse_genomes_project 8 94501666 94507085 - Nfix protein_coding retained_intron MGP_NODShiLtJ_T0089307.1 MGP_NODShiLtJ_G0033672.1 mouse_genomes_project 8 94506811 94597530 - MGP_NODShiLtJ_P0089307 Nfix protein_coding protein_coding MGP_NODShiLtJ_T0099581.1 MGP_NODShiLtJ_G0037975.1 mouse_genomes_project 8 143879641 143879748 + Gm26002 snRNA snRNA MGP_NODShiLtJ_T0010844.1 MGP_NODShiLtJ_G0008977.1 mouse_genomes_project 8 11579480 11579548 - Mir1968 miRNA miRNA MGP_NODShiLtJ_T0088982.1 MGP_NODShiLtJ_G0033572.1 mouse_genomes_project 8 80038962 80048977 - MGP_NODShiLtJ_P0088982 B3gnt3 protein_coding protein_coding MGP_NODShiLtJ_T0089514.1 MGP_NODShiLtJ_G0033734.1 mouse_genomes_project 8 101405572 101426152 - MGP_NODShiLtJ_P0089514 Aktip protein_coding protein_coding MGP_NODShiLtJ_T0089518.1 MGP_NODShiLtJ_G0033734.1 mouse_genomes_project 8 101417181 101429255 - MGP_NODShiLtJ_P0089518 Aktip protein_coding protein_coding MGP_NODShiLtJ_T0089519.1 MGP_NODShiLtJ_G0033734.1 mouse_genomes_project 8 101417181 101428732 - MGP_NODShiLtJ_P0089519 Aktip protein_coding protein_coding MGP_NODShiLtJ_T0089520.1 MGP_NODShiLtJ_G0033734.1 mouse_genomes_project 8 101418136 101428813 - MGP_NODShiLtJ_P0089520 Aktip protein_coding protein_coding MGP_NODShiLtJ_T0089521.1 MGP_NODShiLtJ_G0033734.1 mouse_genomes_project 8 101418298 101428817 - MGP_NODShiLtJ_P0089521 Aktip protein_coding protein_coding MGP_NODShiLtJ_T0089522.1 MGP_NODShiLtJ_G0033734.1 mouse_genomes_project 8 101426085 101426890 - Aktip protein_coding processed_transcript MGP_NODShiLtJ_T0090203.1 MGP_NODShiLtJ_G0033983.1 mouse_genomes_project 8 133830733 133835075 + MGP_NODShiLtJ_P0090203 Hsbp1 protein_coding protein_coding MGP_NODShiLtJ_T0087919.1 MGP_NODShiLtJ_G0033221.1 mouse_genomes_project 8 18111564 18112420 + MGP_NODShiLtJ_P0087919 Defb14 protein_coding protein_coding MGP_NODShiLtJ_T0099560.1 MGP_NODShiLtJ_G0037954.1 mouse_genomes_project 8 96619671 96619779 - Gm22305 snRNA snRNA MGP_NODShiLtJ_T0002600.1 MGP_NODShiLtJ_G0002489.1 mouse_genomes_project 14 50799771 50812309 + MGP_NODShiLtJ_P0002600 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0011259.1 MGP_NODShiLtJ_G0009392.1 mouse_genomes_project 14 26479046 26479143 + Gm26045 misc_RNA misc_RNA MGP_NODShiLtJ_T0002464.1 MGP_NODShiLtJ_G0002369.1 mouse_genomes_project 14 51497387 51497449 + MGP_NODShiLtJ_P0002464 Traj49 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002465.1 MGP_NODShiLtJ_G0002369.1 mouse_genomes_project 14 51497387 51497446 + Traj49 TR_J_gene processed_transcript MGP_NODShiLtJ_T0003485.1 MGP_NODShiLtJ_G0003167.1 mouse_genomes_project 14 34293678 34373659 + Nrg3os antisense antisense MGP_NODShiLtJ_T0039431.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55362087 55477133 - MGP_NODShiLtJ_P0039431 Lats2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039434.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55415716 55477153 - MGP_NODShiLtJ_P0039434 Lats2 protein_coding protein_coding MGP_NODShiLtJ_T0039435.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55417152 55477151 - MGP_NODShiLtJ_P0039435 Lats2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039436.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55420322 55477135 - MGP_NODShiLtJ_P0039436 Lats2 protein_coding protein_coding MGP_NODShiLtJ_T0039437.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55424004 55426586 - MGP_NODShiLtJ_P0039437 Lats2 protein_coding protein_coding MGP_NODShiLtJ_T0039438.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55430959 55489545 - MGP_NODShiLtJ_P0039438 Lats2 protein_coding protein_coding MGP_NODShiLtJ_T0039439.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55450230 55463632 - MGP_NODShiLtJ_P0039439 Lats2 protein_coding protein_coding MGP_NODShiLtJ_T0039440.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55450230 55463632 - MGP_NODShiLtJ_P0039440 Lats2 protein_coding protein_coding MGP_NODShiLtJ_T0039441.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55463511 55475684 - MGP_NODShiLtJ_P0039441 Lats2 protein_coding protein_coding MGP_NODShiLtJ_T0039442.1 MGP_NODShiLtJ_G0021250.1 mouse_genomes_project 14 55463584 55477608 - Lats2 protein_coding processed_transcript MGP_NODShiLtJ_T0039985.1 MGP_NODShiLtJ_G0021456.1 mouse_genomes_project 14 105889240 105903955 + MGP_NODShiLtJ_P0039985 Klf5 protein_coding protein_coding MGP_NODShiLtJ_T0040161.1 MGP_NODShiLtJ_G0021518.1 mouse_genomes_project 14 136069754 136444331 + MGP_NODShiLtJ_P0040161 Itgbl1 protein_coding protein_coding MGP_NODShiLtJ_T0040162.1 MGP_NODShiLtJ_G0021518.1 mouse_genomes_project 14 136069908 136443769 + MGP_NODShiLtJ_P0040162 Itgbl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040163.1 MGP_NODShiLtJ_G0021518.1 mouse_genomes_project 14 136071207 136444331 + MGP_NODShiLtJ_P0040163 Itgbl1 protein_coding protein_coding MGP_NODShiLtJ_T0002591.1 MGP_NODShiLtJ_G0002481.1 mouse_genomes_project 14 50585610 50599767 + MGP_NODShiLtJ_P0002591 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038779.1 MGP_NODShiLtJ_G0021047.1 mouse_genomes_project 14 42921765 42934556 - MGP_NODShiLtJ_P0038779 Cnih1 protein_coding protein_coding MGP_NODShiLtJ_T0038780.1 MGP_NODShiLtJ_G0021047.1 mouse_genomes_project 14 42921765 42934556 - MGP_NODShiLtJ_P0038780 Cnih1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0017285.1 MGP_NODShiLtJ_G0015152.1 mouse_genomes_project 14 127142483 127236608 - Gm20713 processed_transcript processed_transcript MGP_NODShiLtJ_T0009903.1 MGP_NODShiLtJ_G0008036.1 mouse_genomes_project 14 59757300 59757393 - Mir16-1 miRNA miRNA MGP_NODShiLtJ_T0038042.1 MGP_NODShiLtJ_G0020835.1 mouse_genomes_project 14 6803633 6908957 - MGP_NODShiLtJ_P0038042 Gm281 protein_coding protein_coding MGP_NODShiLtJ_T0039939.1 MGP_NODShiLtJ_G0021434.1 mouse_genomes_project 14 78839036 78864817 + MGP_NODShiLtJ_P0039939 Mtrf1 protein_coding protein_coding MGP_NODShiLtJ_T0006672.1 MGP_NODShiLtJ_G0005504.1 mouse_genomes_project 14 129867214 129877503 + Gm26773 lincRNA lincRNA MGP_NODShiLtJ_T0039029.1 MGP_NODShiLtJ_G0021127.1 mouse_genomes_project 14 49150511 49187029 - MGP_NODShiLtJ_P0039029 Supt16 protein_coding protein_coding MGP_NODShiLtJ_T0039202.1 MGP_NODShiLtJ_G0021172.1 mouse_genomes_project 14 52373595 52400460 - MGP_NODShiLtJ_P0039202 protein_coding protein_coding MGP_NODShiLtJ_T0039203.1 MGP_NODShiLtJ_G0021172.1 mouse_genomes_project 14 52373674 52400452 - MGP_NODShiLtJ_P0039203 protein_coding protein_coding MGP_NODShiLtJ_T0039205.1 MGP_NODShiLtJ_G0021172.1 mouse_genomes_project 14 52383566 52389775 - protein_coding retained_intron MGP_NODShiLtJ_T0039206.1 MGP_NODShiLtJ_G0021172.1 mouse_genomes_project 14 52398517 52400374 - MGP_NODShiLtJ_P0039206 protein_coding protein_coding MGP_NODShiLtJ_T0039705.1 MGP_NODShiLtJ_G0021352.1 mouse_genomes_project 14 67251043 67302499 - MGP_NODShiLtJ_P0039705 Adam28 protein_coding protein_coding MGP_NODShiLtJ_T0039706.1 MGP_NODShiLtJ_G0021352.1 mouse_genomes_project 14 67251895 67302499 - MGP_NODShiLtJ_P0039706 Adam28 protein_coding protein_coding MGP_NODShiLtJ_T0038894.1 MGP_NODShiLtJ_G0021078.1 mouse_genomes_project 14 46875799 46876793 - MGP_NODShiLtJ_P0038894 Olfr733 protein_coding protein_coding MGP_NODShiLtJ_T0039702.1 MGP_NODShiLtJ_G0021350.1 mouse_genomes_project 14 67122956 67164270 - MGP_NODShiLtJ_P0039702 Adam7 protein_coding protein_coding MGP_NODShiLtJ_T0039703.1 MGP_NODShiLtJ_G0021350.1 mouse_genomes_project 14 67123448 67136820 - Adam7 protein_coding retained_intron MGP_NODShiLtJ_T0038893.1 MGP_NODShiLtJ_G0021077.1 mouse_genomes_project 14 46856449 46857493 - MGP_NODShiLtJ_P0038893 Olfr732 protein_coding protein_coding MGP_NODShiLtJ_T0039545.1 MGP_NODShiLtJ_G0021290.1 mouse_genomes_project 14 61098153 61239159 + MGP_NODShiLtJ_P0039545 Wdfy2 protein_coding protein_coding MGP_NODShiLtJ_T0038677.1 MGP_NODShiLtJ_G0021011.1 mouse_genomes_project 14 29143596 29198013 - MGP_NODShiLtJ_P0038677 Ldb3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038678.1 MGP_NODShiLtJ_G0021011.1 mouse_genomes_project 14 29143690 29208519 - MGP_NODShiLtJ_P0038678 Ldb3 protein_coding protein_coding MGP_NODShiLtJ_T0038679.1 MGP_NODShiLtJ_G0021011.1 mouse_genomes_project 14 29143690 29208445 - MGP_NODShiLtJ_P0038679 Ldb3 protein_coding protein_coding MGP_NODShiLtJ_T0038680.1 MGP_NODShiLtJ_G0021011.1 mouse_genomes_project 14 29143690 29208519 - MGP_NODShiLtJ_P0038680 Ldb3 protein_coding protein_coding MGP_NODShiLtJ_T0038681.1 MGP_NODShiLtJ_G0021011.1 mouse_genomes_project 14 29143690 29208519 - MGP_NODShiLtJ_P0038681 Ldb3 protein_coding protein_coding MGP_NODShiLtJ_T0038682.1 MGP_NODShiLtJ_G0021011.1 mouse_genomes_project 14 29179922 29208519 - MGP_NODShiLtJ_P0038682 Ldb3 protein_coding protein_coding MGP_NODShiLtJ_T0012864.1 MGP_NODShiLtJ_G0010972.1 mouse_genomes_project 14 20097045 20098234 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038423.1 MGP_NODShiLtJ_G0020943.1 mouse_genomes_project 14 25218293 25220649 + MGP_NODShiLtJ_P0038423 Mustn1 protein_coding protein_coding MGP_NODShiLtJ_T0011258.1 MGP_NODShiLtJ_G0009391.1 mouse_genomes_project 14 26263815 26264113 - Gm22876 misc_RNA misc_RNA MGP_NODShiLtJ_T0039945.1 MGP_NODShiLtJ_G0021439.1 mouse_genomes_project 14 79062156 79107969 + MGP_NODShiLtJ_P0039945 Sugt1 protein_coding protein_coding MGP_NODShiLtJ_T0039666.1 MGP_NODShiLtJ_G0021338.1 mouse_genomes_project 14 65304679 65372747 - MGP_NODShiLtJ_P0039666 Dpysl2 protein_coding protein_coding MGP_NODShiLtJ_T0002470.1 MGP_NODShiLtJ_G0002373.1 mouse_genomes_project 14 51501523 51501586 + MGP_NODShiLtJ_P0002470 Traj45 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0040023.1 MGP_NODShiLtJ_G0021466.1 mouse_genomes_project 14 110143823 110151187 + MGP_NODShiLtJ_P0040023 Cln5 protein_coding protein_coding MGP_NODShiLtJ_T0039124.1 MGP_NODShiLtJ_G0021148.1 mouse_genomes_project 14 51826189 51830523 + MGP_NODShiLtJ_P0039124 Rem2 protein_coding protein_coding MGP_NODShiLtJ_T0039125.1 MGP_NODShiLtJ_G0021148.1 mouse_genomes_project 14 51826329 51827984 + Rem2 protein_coding retained_intron MGP_NODShiLtJ_T0039126.1 MGP_NODShiLtJ_G0021148.1 mouse_genomes_project 14 51826341 51829770 + MGP_NODShiLtJ_P0039126 Rem2 protein_coding protein_coding MGP_NODShiLtJ_T0039127.1 MGP_NODShiLtJ_G0021148.1 mouse_genomes_project 14 51827560 51829208 + MGP_NODShiLtJ_P0039127 Rem2 protein_coding protein_coding MGP_NODShiLtJ_T0002614.1 MGP_NODShiLtJ_G0002499.1 mouse_genomes_project 14 51188960 51189731 + MGP_NODShiLtJ_P0002614 Trav21-dv12 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039738.1 MGP_NODShiLtJ_G0021369.1 mouse_genomes_project 14 68667115 68706172 + MGP_NODShiLtJ_P0039738 Bin3 protein_coding protein_coding MGP_NODShiLtJ_T0098853.1 MGP_NODShiLtJ_G0037247.1 mouse_genomes_project 14 61397117 61397204 + Gm23629 snRNA snRNA MGP_NODShiLtJ_T0006596.1 MGP_NODShiLtJ_G0005449.1 mouse_genomes_project 14 12702294 12704833 + lincRNA lincRNA MGP_NODShiLtJ_T0040103.1 MGP_NODShiLtJ_G0021497.1 mouse_genomes_project 14 132287687 132455901 + MGP_NODShiLtJ_P0040103 Mbnl2 protein_coding protein_coding MGP_NODShiLtJ_T0040104.1 MGP_NODShiLtJ_G0021497.1 mouse_genomes_project 14 132287687 132455901 + MGP_NODShiLtJ_P0040104 Mbnl2 protein_coding protein_coding MGP_NODShiLtJ_T0038735.1 MGP_NODShiLtJ_G0021032.1 mouse_genomes_project 14 37033092 37044940 + MGP_NODShiLtJ_P0038735 Mbl1 protein_coding protein_coding MGP_NODShiLtJ_T0039884.1 MGP_NODShiLtJ_G0021413.1 mouse_genomes_project 14 74909365 74916515 + MGP_NODShiLtJ_P0039884 Tpt1 protein_coding protein_coding MGP_NODShiLtJ_T0039885.1 MGP_NODShiLtJ_G0021413.1 mouse_genomes_project 14 74909574 74916625 + MGP_NODShiLtJ_P0039885 Tpt1 protein_coding protein_coding MGP_NODShiLtJ_T0039886.1 MGP_NODShiLtJ_G0021413.1 mouse_genomes_project 14 74909603 74912032 + Tpt1 protein_coding retained_intron MGP_NODShiLtJ_T0039887.1 MGP_NODShiLtJ_G0021413.1 mouse_genomes_project 14 74909604 74910242 + Tpt1 protein_coding retained_intron MGP_NODShiLtJ_T0039888.1 MGP_NODShiLtJ_G0021413.1 mouse_genomes_project 14 74909627 74912228 + Tpt1 protein_coding retained_intron MGP_NODShiLtJ_T0039576.1 MGP_NODShiLtJ_G0021303.1 mouse_genomes_project 14 61845689 61866003 - MGP_NODShiLtJ_P0039576 Mtmr9 protein_coding protein_coding MGP_NODShiLtJ_T0012887.1 MGP_NODShiLtJ_G0010995.1 mouse_genomes_project 14 49421680 49421965 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038041.1 MGP_NODShiLtJ_G0020834.1 mouse_genomes_project 14 6621823 6634096 + MGP_NODShiLtJ_P0038041 Sntn protein_coding protein_coding MGP_NODShiLtJ_T0000907.1 MGP_NODShiLtJ_G0000836.1 mouse_genomes_project 14 106373406 106423929 - TEC TEC MGP_NODShiLtJ_T0006662.1 MGP_NODShiLtJ_G0005496.1 mouse_genomes_project 14 69469664 69491355 + 2410012E07Rik lincRNA lincRNA MGP_NODShiLtJ_T0038085.1 MGP_NODShiLtJ_G0020853.1 mouse_genomes_project 14 11623542 11630371 - MGP_NODShiLtJ_P0038085 Rpl15 protein_coding protein_coding MGP_NODShiLtJ_T0038086.1 MGP_NODShiLtJ_G0020853.1 mouse_genomes_project 14 11624665 11629930 - MGP_NODShiLtJ_P0038086 Rpl15 protein_coding protein_coding MGP_NODShiLtJ_T0038087.1 MGP_NODShiLtJ_G0020853.1 mouse_genomes_project 14 11624665 11630333 - MGP_NODShiLtJ_P0038087 Rpl15 protein_coding protein_coding MGP_NODShiLtJ_T0038088.1 MGP_NODShiLtJ_G0020853.1 mouse_genomes_project 14 11624679 11630274 - MGP_NODShiLtJ_P0038088 Rpl15 protein_coding protein_coding MGP_NODShiLtJ_T0038089.1 MGP_NODShiLtJ_G0020853.1 mouse_genomes_project 14 11628607 11630695 - MGP_NODShiLtJ_P0038089 Rpl15 protein_coding protein_coding MGP_NODShiLtJ_T0039850.1 MGP_NODShiLtJ_G0021401.1 mouse_genomes_project 14 73693180 73711650 + MGP_NODShiLtJ_P0039850 Esd protein_coding protein_coding MGP_NODShiLtJ_T0039851.1 MGP_NODShiLtJ_G0021401.1 mouse_genomes_project 14 73693202 73703480 + Esd protein_coding retained_intron MGP_NODShiLtJ_T0039852.1 MGP_NODShiLtJ_G0021401.1 mouse_genomes_project 14 73693204 73700337 + Esd protein_coding processed_transcript MGP_NODShiLtJ_T0039853.1 MGP_NODShiLtJ_G0021401.1 mouse_genomes_project 14 73693240 73706463 + MGP_NODShiLtJ_P0039853 Esd protein_coding protein_coding MGP_NODShiLtJ_T0039854.1 MGP_NODShiLtJ_G0021401.1 mouse_genomes_project 14 73693267 73710733 + MGP_NODShiLtJ_P0039854 Esd protein_coding protein_coding MGP_NODShiLtJ_T0039855.1 MGP_NODShiLtJ_G0021401.1 mouse_genomes_project 14 73699324 73704429 + Esd protein_coding retained_intron MGP_NODShiLtJ_T0039856.1 MGP_NODShiLtJ_G0021401.1 mouse_genomes_project 14 73699387 73710640 + MGP_NODShiLtJ_P0039856 Esd protein_coding protein_coding MGP_NODShiLtJ_T0039920.1 MGP_NODShiLtJ_G0021425.1 mouse_genomes_project 14 77163112 77271248 + MGP_NODShiLtJ_P0039920 Epsti1 protein_coding protein_coding MGP_NODShiLtJ_T0039921.1 MGP_NODShiLtJ_G0021425.1 mouse_genomes_project 14 77163280 77227105 + MGP_NODShiLtJ_P0039921 Epsti1 protein_coding protein_coding MGP_NODShiLtJ_T0037987.1 MGP_NODShiLtJ_G0020817.1 mouse_genomes_project 14 299528 329460 - MGP_NODShiLtJ_P0037987 Dnase1l3 protein_coding protein_coding MGP_NODShiLtJ_T0037988.1 MGP_NODShiLtJ_G0020817.1 mouse_genomes_project 14 310903 312234 - Dnase1l3 protein_coding processed_transcript MGP_NODShiLtJ_T0009891.1 MGP_NODShiLtJ_G0008024.1 mouse_genomes_project 14 29551935 29552033 + Mir346 miRNA miRNA MGP_NODShiLtJ_T0038977.1 MGP_NODShiLtJ_G0021119.1 mouse_genomes_project 14 48866253 48869823 + MGP_NODShiLtJ_P0038977 Tppp2 protein_coding protein_coding MGP_NODShiLtJ_T0038978.1 MGP_NODShiLtJ_G0021119.1 mouse_genomes_project 14 48867889 48869823 + MGP_NODShiLtJ_P0038978 Tppp2 protein_coding protein_coding MGP_NODShiLtJ_T0039919.1 MGP_NODShiLtJ_G0021424.1 mouse_genomes_project 14 77067305 77125874 - MGP_NODShiLtJ_P0039919 Dnajc15 protein_coding protein_coding MGP_NODShiLtJ_T0040132.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 134802904 134863023 + Pcca protein_coding retained_intron MGP_NODShiLtJ_T0040133.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 134802911 134904361 + MGP_NODShiLtJ_P0040133 Pcca protein_coding protein_coding MGP_NODShiLtJ_T0040134.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 134802919 135192632 + MGP_NODShiLtJ_P0040134 Pcca protein_coding protein_coding MGP_NODShiLtJ_T0040135.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 134802925 134938468 + MGP_NODShiLtJ_P0040135 Pcca protein_coding protein_coding MGP_NODShiLtJ_T0040136.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 134862729 135192516 + MGP_NODShiLtJ_P0040136 Pcca protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040137.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 134888407 134953450 + Pcca protein_coding processed_transcript MGP_NODShiLtJ_T0040138.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 135006022 135030832 + MGP_NODShiLtJ_P0040138 Pcca protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040139.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 135006048 135192513 + MGP_NODShiLtJ_P0040139 Pcca protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040140.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 135006112 135107770 + Pcca protein_coding processed_transcript MGP_NODShiLtJ_T0040141.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 135030736 135108116 + Pcca protein_coding retained_intron MGP_NODShiLtJ_T0040142.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 135079765 135192508 + MGP_NODShiLtJ_P0040142 Pcca protein_coding protein_coding MGP_NODShiLtJ_T0040144.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 135177519 135193788 + Pcca protein_coding processed_transcript MGP_NODShiLtJ_T0040145.1 MGP_NODShiLtJ_G0021514.1 mouse_genomes_project 14 135189590 135192516 + Pcca protein_coding retained_intron MGP_NODShiLtJ_T0006634.1 MGP_NODShiLtJ_G0005475.1 mouse_genomes_project 14 48117700 48121785 + lincRNA lincRNA MGP_NODShiLtJ_T0006635.1 MGP_NODShiLtJ_G0005475.1 mouse_genomes_project 14 48119023 48122794 + lincRNA lincRNA MGP_NODShiLtJ_T0000905.1 MGP_NODShiLtJ_G0000834.1 mouse_genomes_project 14 91820297 91820732 + TEC TEC MGP_NODShiLtJ_T0100097.1 MGP_NODShiLtJ_G0038491.1 mouse_genomes_project 14 28680848 28680937 + Gm24998 snoRNA snoRNA MGP_NODShiLtJ_T0039299.1 MGP_NODShiLtJ_G0021192.1 mouse_genomes_project 14 53051197 53059121 + MGP_NODShiLtJ_P0039299 Irf9 protein_coding protein_coding MGP_NODShiLtJ_T0039300.1 MGP_NODShiLtJ_G0021192.1 mouse_genomes_project 14 53051611 53059121 + MGP_NODShiLtJ_P0039300 Irf9 protein_coding protein_coding MGP_NODShiLtJ_T0039301.1 MGP_NODShiLtJ_G0021192.1 mouse_genomes_project 14 53052203 53054947 + Irf9 protein_coding retained_intron MGP_NODShiLtJ_T0039302.1 MGP_NODShiLtJ_G0021192.1 mouse_genomes_project 14 53052205 53059121 + MGP_NODShiLtJ_P0039302 Irf9 protein_coding protein_coding MGP_NODShiLtJ_T0039303.1 MGP_NODShiLtJ_G0021192.1 mouse_genomes_project 14 53054906 53059118 + Irf9 protein_coding retained_intron MGP_NODShiLtJ_T0039304.1 MGP_NODShiLtJ_G0021192.1 mouse_genomes_project 14 53056365 53057824 + Irf9 protein_coding retained_intron MGP_NODShiLtJ_T0038630.1 MGP_NODShiLtJ_G0020989.1 mouse_genomes_project 14 27749214 27752195 + Arhgap22 protein_coding processed_transcript MGP_NODShiLtJ_T0038631.1 MGP_NODShiLtJ_G0020989.1 mouse_genomes_project 14 27749358 27911924 + MGP_NODShiLtJ_P0038631 Arhgap22 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038632.1 MGP_NODShiLtJ_G0020989.1 mouse_genomes_project 14 27785194 27809947 + Arhgap22 protein_coding processed_transcript MGP_NODShiLtJ_T0038633.1 MGP_NODShiLtJ_G0020989.1 mouse_genomes_project 14 27847118 27911914 + Arhgap22 protein_coding processed_transcript MGP_NODShiLtJ_T0038634.1 MGP_NODShiLtJ_G0020989.1 mouse_genomes_project 14 27861636 27911916 + MGP_NODShiLtJ_P0038634 Arhgap22 protein_coding protein_coding MGP_NODShiLtJ_T0038635.1 MGP_NODShiLtJ_G0020989.1 mouse_genomes_project 14 27893299 27904551 + Arhgap22 protein_coding processed_transcript MGP_NODShiLtJ_T0038636.1 MGP_NODShiLtJ_G0020989.1 mouse_genomes_project 14 27904272 27906452 + Arhgap22 protein_coding processed_transcript MGP_NODShiLtJ_T0038637.1 MGP_NODShiLtJ_G0020989.1 mouse_genomes_project 14 27904351 27905301 + Arhgap22 protein_coding processed_transcript MGP_NODShiLtJ_T0038729.1 MGP_NODShiLtJ_G0021029.1 mouse_genomes_project 14 36949211 36970349 + MGP_NODShiLtJ_P0038729 Dydc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038730.1 MGP_NODShiLtJ_G0021029.1 mouse_genomes_project 14 36949211 36970356 + MGP_NODShiLtJ_P0038730 Dydc1 protein_coding protein_coding MGP_NODShiLtJ_T0038731.1 MGP_NODShiLtJ_G0021029.1 mouse_genomes_project 14 36949240 36970352 + MGP_NODShiLtJ_P0038731 Dydc1 protein_coding protein_coding MGP_NODShiLtJ_T0012854.1 MGP_NODShiLtJ_G0010962.1 mouse_genomes_project 14 11925736 11926834 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040047.1 MGP_NODShiLtJ_G0021473.1 mouse_genomes_project 14 111716906 111762925 - MGP_NODShiLtJ_P0040047 Rnf219 protein_coding protein_coding MGP_NODShiLtJ_T0039237.1 MGP_NODShiLtJ_G0021182.1 mouse_genomes_project 14 52951221 52958244 + MGP_NODShiLtJ_P0039237 Cpne6 protein_coding protein_coding MGP_NODShiLtJ_T0039238.1 MGP_NODShiLtJ_G0021182.1 mouse_genomes_project 14 52951224 52958244 + MGP_NODShiLtJ_P0039238 Cpne6 protein_coding protein_coding MGP_NODShiLtJ_T0039239.1 MGP_NODShiLtJ_G0021182.1 mouse_genomes_project 14 52951251 52958243 + Cpne6 protein_coding retained_intron MGP_NODShiLtJ_T0039240.1 MGP_NODShiLtJ_G0021182.1 mouse_genomes_project 14 52951373 52954499 + MGP_NODShiLtJ_P0039240 Cpne6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039241.1 MGP_NODShiLtJ_G0021182.1 mouse_genomes_project 14 52952087 52958244 + Cpne6 protein_coding retained_intron MGP_NODShiLtJ_T0039242.1 MGP_NODShiLtJ_G0021182.1 mouse_genomes_project 14 52952136 52958244 + MGP_NODShiLtJ_P0039242 Cpne6 protein_coding protein_coding MGP_NODShiLtJ_T0039243.1 MGP_NODShiLtJ_G0021182.1 mouse_genomes_project 14 52952761 52958242 + MGP_NODShiLtJ_P0039243 Cpne6 protein_coding protein_coding MGP_NODShiLtJ_T0002491.1 MGP_NODShiLtJ_G0002394.1 mouse_genomes_project 14 51525475 51525535 + MGP_NODShiLtJ_P0002491 Traj23 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039075.1 MGP_NODShiLtJ_G0021134.1 mouse_genomes_project 14 49370593 49372093 - MGP_NODShiLtJ_P0039075 Olfr1512 protein_coding protein_coding MGP_NODShiLtJ_T0038895.1 MGP_NODShiLtJ_G0021079.1 mouse_genomes_project 14 46898219 46899252 - MGP_NODShiLtJ_P0038895 Olfr734 protein_coding protein_coding MGP_NODShiLtJ_T0003476.1 MGP_NODShiLtJ_G0003158.1 mouse_genomes_project 14 19585888 19591268 - Zmiz1os1 antisense antisense MGP_NODShiLtJ_T0012928.1 MGP_NODShiLtJ_G0011036.1 mouse_genomes_project 14 134762179 134762818 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098862.1 MGP_NODShiLtJ_G0037256.1 mouse_genomes_project 14 105139710 105139817 + Gm26139 snRNA snRNA MGP_NODShiLtJ_T0002501.1 MGP_NODShiLtJ_G0002404.1 mouse_genomes_project 14 51535934 51535992 + MGP_NODShiLtJ_P0002501 Traj12 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0006664.1 MGP_NODShiLtJ_G0005498.1 mouse_genomes_project 14 75636827 75643123 - 4930444M15Rik lincRNA lincRNA MGP_NODShiLtJ_T0038527.1 MGP_NODShiLtJ_G0020962.1 mouse_genomes_project 14 25744536 25820813 - MGP_NODShiLtJ_P0038527 Sh3bp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038528.1 MGP_NODShiLtJ_G0020962.1 mouse_genomes_project 14 25758446 25802335 - MGP_NODShiLtJ_P0038528 Sh3bp5 protein_coding protein_coding MGP_NODShiLtJ_T0038529.1 MGP_NODShiLtJ_G0020962.1 mouse_genomes_project 14 25758446 25820800 - MGP_NODShiLtJ_P0038529 Sh3bp5 protein_coding protein_coding MGP_NODShiLtJ_T0038530.1 MGP_NODShiLtJ_G0020962.1 mouse_genomes_project 14 25762256 25792043 - Sh3bp5 protein_coding processed_transcript MGP_NODShiLtJ_T0038691.1 MGP_NODShiLtJ_G0021014.1 mouse_genomes_project 14 29477336 30296409 + MGP_NODShiLtJ_P0038691 Grid1 protein_coding protein_coding MGP_NODShiLtJ_T0038692.1 MGP_NODShiLtJ_G0021014.1 mouse_genomes_project 14 30283036 30294142 + Grid1 protein_coding processed_transcript MGP_NODShiLtJ_T0097947.1 MGP_NODShiLtJ_G0036359.1 mouse_genomes_project 14 130656539 130656662 - n-R5s51 rRNA rRNA MGP_NODShiLtJ_T0003470.1 MGP_NODShiLtJ_G0003155.1 mouse_genomes_project 14 15592407 15597217 + Gm15935 antisense antisense MGP_NODShiLtJ_T0003471.1 MGP_NODShiLtJ_G0003155.1 mouse_genomes_project 14 15592429 15597512 + Gm15935 antisense antisense MGP_NODShiLtJ_T0003472.1 MGP_NODShiLtJ_G0003155.1 mouse_genomes_project 14 15592453 15596963 + Gm15935 antisense antisense MGP_NODShiLtJ_T0039142.1 MGP_NODShiLtJ_G0021157.1 mouse_genomes_project 14 52001304 52008606 + MGP_NODShiLtJ_P0039142 Gm17606 protein_coding protein_coding MGP_NODShiLtJ_T0100130.1 MGP_NODShiLtJ_G0038524.1 mouse_genomes_project 14 103420964 103421102 - Gm23276 snoRNA snoRNA MGP_NODShiLtJ_T0002678.1 MGP_NODShiLtJ_G0002551.1 mouse_genomes_project 14 51047476 51047738 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0038749.1 MGP_NODShiLtJ_G0021037.1 mouse_genomes_project 14 41217537 41222052 + Gpr137c protein_coding processed_transcript MGP_NODShiLtJ_T0038750.1 MGP_NODShiLtJ_G0021037.1 mouse_genomes_project 14 41217811 41288318 + MGP_NODShiLtJ_P0038750 Gpr137c protein_coding protein_coding MGP_NODShiLtJ_T0038751.1 MGP_NODShiLtJ_G0021037.1 mouse_genomes_project 14 41267991 41286341 + Gpr137c protein_coding retained_intron MGP_NODShiLtJ_T0003477.1 MGP_NODShiLtJ_G0003159.1 mouse_genomes_project 14 20010752 20024278 - Anxa11os antisense antisense MGP_NODShiLtJ_T0040075.1 MGP_NODShiLtJ_G0021486.1 mouse_genomes_project 14 129871282 129893168 - MGP_NODShiLtJ_P0040075 Tgds protein_coding protein_coding MGP_NODShiLtJ_T0038043.1 MGP_NODShiLtJ_G0020836.1 mouse_genomes_project 14 6944447 6956444 - MGP_NODShiLtJ_P0038043 Thoc7 protein_coding protein_coding MGP_NODShiLtJ_T0038044.1 MGP_NODShiLtJ_G0020836.1 mouse_genomes_project 14 6944693 6951529 - MGP_NODShiLtJ_P0038044 Thoc7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012852.1 MGP_NODShiLtJ_G0010960.1 mouse_genomes_project 14 6273028 6273160 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038308.1 MGP_NODShiLtJ_G0020911.1 mouse_genomes_project 14 20141932 20147141 + protein_coding processed_transcript MGP_NODShiLtJ_T0038313.1 MGP_NODShiLtJ_G0020911.1 mouse_genomes_project 14 20143728 20151163 + protein_coding processed_transcript MGP_NODShiLtJ_T0038315.1 MGP_NODShiLtJ_G0020911.1 mouse_genomes_project 14 20146638 20153754 + MGP_NODShiLtJ_P0038315 protein_coding protein_coding MGP_NODShiLtJ_T0040112.1 MGP_NODShiLtJ_G0021501.1 mouse_genomes_project 14 133399761 133496836 - MGP_NODShiLtJ_P0040112 Stk24 protein_coding protein_coding MGP_NODShiLtJ_T0040122.1 MGP_NODShiLtJ_G0021508.1 mouse_genomes_project 14 134334883 134390128 + MGP_NODShiLtJ_P0040122 Tm9sf2 protein_coding protein_coding MGP_NODShiLtJ_T0040123.1 MGP_NODShiLtJ_G0021508.1 mouse_genomes_project 14 134334983 134367534 + MGP_NODShiLtJ_P0040123 Tm9sf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040124.1 MGP_NODShiLtJ_G0021508.1 mouse_genomes_project 14 134335113 134388659 + MGP_NODShiLtJ_P0040124 Tm9sf2 protein_coding protein_coding MGP_NODShiLtJ_T0009923.1 MGP_NODShiLtJ_G0008056.1 mouse_genomes_project 14 110809475 110809580 - Gm22877 miRNA miRNA MGP_NODShiLtJ_T0040022.1 MGP_NODShiLtJ_G0021465.1 mouse_genomes_project 14 110119064 110128514 + MGP_NODShiLtJ_P0040022 Acod1 protein_coding protein_coding MGP_NODShiLtJ_T0038447.1 MGP_NODShiLtJ_G0020949.1 mouse_genomes_project 14 25353152 25376238 + MGP_NODShiLtJ_P0038447 Glt8d1 protein_coding protein_coding MGP_NODShiLtJ_T0038448.1 MGP_NODShiLtJ_G0020949.1 mouse_genomes_project 14 25353192 25376238 + MGP_NODShiLtJ_P0038448 Glt8d1 protein_coding protein_coding MGP_NODShiLtJ_T0039685.1 MGP_NODShiLtJ_G0021344.1 mouse_genomes_project 14 66243311 66282865 - MGP_NODShiLtJ_P0039685 Cdca2 protein_coding protein_coding MGP_NODShiLtJ_T0039686.1 MGP_NODShiLtJ_G0021344.1 mouse_genomes_project 14 66243335 66282634 - MGP_NODShiLtJ_P0039686 Cdca2 protein_coding protein_coding MGP_NODShiLtJ_T0039687.1 MGP_NODShiLtJ_G0021344.1 mouse_genomes_project 14 66244776 66263714 - MGP_NODShiLtJ_P0039687 Cdca2 protein_coding protein_coding MGP_NODShiLtJ_T0039688.1 MGP_NODShiLtJ_G0021344.1 mouse_genomes_project 14 66247283 66282634 - MGP_NODShiLtJ_P0039688 Cdca2 protein_coding protein_coding MGP_NODShiLtJ_T0039689.1 MGP_NODShiLtJ_G0021344.1 mouse_genomes_project 14 66261109 66264961 - MGP_NODShiLtJ_P0039689 Cdca2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039690.1 MGP_NODShiLtJ_G0021344.1 mouse_genomes_project 14 66265915 66282399 - Cdca2 protein_coding retained_intron MGP_NODShiLtJ_T0039691.1 MGP_NODShiLtJ_G0021344.1 mouse_genomes_project 14 66267251 66282705 - MGP_NODShiLtJ_P0039691 Cdca2 protein_coding protein_coding MGP_NODShiLtJ_T0098480.1 MGP_NODShiLtJ_G0036878.1 mouse_genomes_project 14 66240145 66242087 - Gm20667 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0003469.1 MGP_NODShiLtJ_G0003154.1 mouse_genomes_project 14 14392928 14395971 + 2810402E24Rik antisense antisense MGP_NODShiLtJ_T0002526.1 MGP_NODShiLtJ_G0002427.1 mouse_genomes_project 14 51483884 51483938 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0039322.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53087233 53094519 - MGP_NODShiLtJ_P0039322 Tm9sf1 protein_coding protein_coding MGP_NODShiLtJ_T0039323.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53087233 53095074 - MGP_NODShiLtJ_P0039323 Tm9sf1 protein_coding protein_coding MGP_NODShiLtJ_T0039324.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53087236 53094583 - MGP_NODShiLtJ_P0039324 Tm9sf1 protein_coding protein_coding MGP_NODShiLtJ_T0039325.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53087280 53094622 - MGP_NODShiLtJ_P0039325 Tm9sf1 protein_coding protein_coding MGP_NODShiLtJ_T0039326.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53087284 53094629 - MGP_NODShiLtJ_P0039326 Tm9sf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039327.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53087328 53094608 - MGP_NODShiLtJ_P0039327 Tm9sf1 protein_coding protein_coding MGP_NODShiLtJ_T0039328.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53089100 53094791 - MGP_NODShiLtJ_P0039328 Tm9sf1 protein_coding protein_coding MGP_NODShiLtJ_T0039329.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53089568 53092328 - Tm9sf1 protein_coding processed_transcript MGP_NODShiLtJ_T0039330.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53091363 53094639 - Tm9sf1 protein_coding retained_intron MGP_NODShiLtJ_T0039331.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53091652 53094828 - Tm9sf1 protein_coding processed_transcript MGP_NODShiLtJ_T0039332.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53091711 53092867 - Tm9sf1 protein_coding retained_intron MGP_NODShiLtJ_T0039333.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53092685 53095039 - MGP_NODShiLtJ_P0039333 Tm9sf1 protein_coding protein_coding MGP_NODShiLtJ_T0039334.1 MGP_NODShiLtJ_G0021195.1 mouse_genomes_project 14 53093851 53094601 - MGP_NODShiLtJ_P0039334 Tm9sf1 protein_coding protein_coding MGP_NODShiLtJ_T0039873.1 MGP_NODShiLtJ_G0021407.1 mouse_genomes_project 14 74305518 74370931 + MGP_NODShiLtJ_P0039873 Zc3h13 protein_coding protein_coding MGP_NODShiLtJ_T0039874.1 MGP_NODShiLtJ_G0021407.1 mouse_genomes_project 14 74312327 74370939 + MGP_NODShiLtJ_P0039874 Zc3h13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039117.1 MGP_NODShiLtJ_G0021146.1 mouse_genomes_project 14 51778126 51787603 + MGP_NODShiLtJ_P0039117 Mmp14 protein_coding protein_coding MGP_NODShiLtJ_T0039118.1 MGP_NODShiLtJ_G0021146.1 mouse_genomes_project 14 51778137 51782711 + MGP_NODShiLtJ_P0039118 Mmp14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039119.1 MGP_NODShiLtJ_G0021146.1 mouse_genomes_project 14 51778178 51782683 + Mmp14 protein_coding retained_intron MGP_NODShiLtJ_T0039120.1 MGP_NODShiLtJ_G0021146.1 mouse_genomes_project 14 51778232 51779779 + Mmp14 protein_coding retained_intron MGP_NODShiLtJ_T0039121.1 MGP_NODShiLtJ_G0021146.1 mouse_genomes_project 14 51778380 51788780 + MGP_NODShiLtJ_P0039121 Mmp14 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039122.1 MGP_NODShiLtJ_G0021146.1 mouse_genomes_project 14 51778950 51782395 + MGP_NODShiLtJ_P0039122 Mmp14 protein_coding protein_coding MGP_NODShiLtJ_T0039660.1 MGP_NODShiLtJ_G0021336.1 mouse_genomes_project 14 65111386 65211592 + MGP_NODShiLtJ_P0039660 Adra1a protein_coding protein_coding MGP_NODShiLtJ_T0039661.1 MGP_NODShiLtJ_G0021336.1 mouse_genomes_project 14 65111393 65211456 + MGP_NODShiLtJ_P0039661 Adra1a protein_coding protein_coding MGP_NODShiLtJ_T0039662.1 MGP_NODShiLtJ_G0021336.1 mouse_genomes_project 14 65111444 65116471 + Adra1a protein_coding retained_intron MGP_NODShiLtJ_T0039663.1 MGP_NODShiLtJ_G0021336.1 mouse_genomes_project 14 65111476 65208112 + MGP_NODShiLtJ_P0039663 Adra1a protein_coding protein_coding MGP_NODShiLtJ_T0039664.1 MGP_NODShiLtJ_G0021336.1 mouse_genomes_project 14 65111691 65210868 + MGP_NODShiLtJ_P0039664 Adra1a protein_coding protein_coding MGP_NODShiLtJ_T0039443.1 MGP_NODShiLtJ_G0021251.1 mouse_genomes_project 14 55531791 55538884 + MGP_NODShiLtJ_P0039443 Sap18 protein_coding protein_coding MGP_NODShiLtJ_T0039444.1 MGP_NODShiLtJ_G0021251.1 mouse_genomes_project 14 55531829 55538873 + MGP_NODShiLtJ_P0039444 Sap18 protein_coding protein_coding MGP_NODShiLtJ_T0039445.1 MGP_NODShiLtJ_G0021251.1 mouse_genomes_project 14 55531875 55532567 + Sap18 protein_coding retained_intron MGP_NODShiLtJ_T0039446.1 MGP_NODShiLtJ_G0021251.1 mouse_genomes_project 14 55532037 55535986 + MGP_NODShiLtJ_P0039446 Sap18 protein_coding protein_coding MGP_NODShiLtJ_T0039447.1 MGP_NODShiLtJ_G0021251.1 mouse_genomes_project 14 55532349 55536166 + MGP_NODShiLtJ_P0039447 Sap18 protein_coding protein_coding MGP_NODShiLtJ_T0039448.1 MGP_NODShiLtJ_G0021251.1 mouse_genomes_project 14 55532355 55536174 + MGP_NODShiLtJ_P0039448 Sap18 protein_coding protein_coding MGP_NODShiLtJ_T0038101.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 11975733 12352229 - MGP_NODShiLtJ_P0038101 Ube2e2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038102.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 11975735 12358382 - MGP_NODShiLtJ_P0038102 Ube2e2 protein_coding protein_coding MGP_NODShiLtJ_T0038103.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 11976199 12352077 - MGP_NODShiLtJ_P0038103 Ube2e2 protein_coding protein_coding MGP_NODShiLtJ_T0038104.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 11976452 12352221 - MGP_NODShiLtJ_P0038104 Ube2e2 protein_coding protein_coding MGP_NODShiLtJ_T0038105.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 11976521 12008658 - Ube2e2 protein_coding processed_transcript MGP_NODShiLtJ_T0038106.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 11976521 12352173 - MGP_NODShiLtJ_P0038106 Ube2e2 protein_coding protein_coding MGP_NODShiLtJ_T0038107.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 11990897 12086466 - Ube2e2 protein_coding processed_transcript MGP_NODShiLtJ_T0038108.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 11990897 12358276 - MGP_NODShiLtJ_P0038108 Ube2e2 protein_coding protein_coding MGP_NODShiLtJ_T0038109.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 12008550 12358324 - Ube2e2 protein_coding processed_transcript MGP_NODShiLtJ_T0038110.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 12046598 12352229 - MGP_NODShiLtJ_P0038110 Ube2e2 protein_coding protein_coding MGP_NODShiLtJ_T0038111.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 12046610 12358873 - MGP_NODShiLtJ_P0038111 Ube2e2 protein_coding protein_coding MGP_NODShiLtJ_T0038112.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 12046668 12352229 - Ube2e2 protein_coding processed_transcript MGP_NODShiLtJ_T0038113.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 12056873 12352229 - Ube2e2 protein_coding processed_transcript MGP_NODShiLtJ_T0038114.1 MGP_NODShiLtJ_G0020856.1 mouse_genomes_project 14 12350146 12358141 - Ube2e2 protein_coding retained_intron MGP_NODShiLtJ_T0039617.1 MGP_NODShiLtJ_G0021323.1 mouse_genomes_project 14 64073636 64177395 + MGP_NODShiLtJ_P0039617 Scara5 protein_coding protein_coding MGP_NODShiLtJ_T0039618.1 MGP_NODShiLtJ_G0021323.1 mouse_genomes_project 14 64073670 64155588 + MGP_NODShiLtJ_P0039618 Scara5 protein_coding protein_coding MGP_NODShiLtJ_T0039619.1 MGP_NODShiLtJ_G0021323.1 mouse_genomes_project 14 64084247 64155436 + Scara5 protein_coding processed_transcript MGP_NODShiLtJ_T0039007.1 MGP_NODShiLtJ_G0021123.1 mouse_genomes_project 14 48980800 48985686 + MGP_NODShiLtJ_P0039007 Tmem253 protein_coding protein_coding MGP_NODShiLtJ_T0039404.1 MGP_NODShiLtJ_G0021237.1 mouse_genomes_project 14 54647803 54655422 + MGP_NODShiLtJ_P0039404 protein_coding protein_coding MGP_NODShiLtJ_T0009926.1 MGP_NODShiLtJ_G0008059.1 mouse_genomes_project 14 116808758 116808919 + Gm24818 miRNA miRNA MGP_NODShiLtJ_T0002490.1 MGP_NODShiLtJ_G0002393.1 mouse_genomes_project 14 51525032 51525095 + MGP_NODShiLtJ_P0002490 Traj24 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002563.1 MGP_NODShiLtJ_G0002457.1 mouse_genomes_project 14 49898796 49899262 + MGP_NODShiLtJ_P0002563 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0017277.1 MGP_NODShiLtJ_G0015148.1 mouse_genomes_project 14 77344108 77369414 + Gm19301 processed_transcript processed_transcript MGP_NODShiLtJ_T0039475.1 MGP_NODShiLtJ_G0021261.1 mouse_genomes_project 14 57295500 57326279 - MGP_NODShiLtJ_P0039475 Phf11d protein_coding protein_coding MGP_NODShiLtJ_T0039476.1 MGP_NODShiLtJ_G0021261.1 mouse_genomes_project 14 57297450 57326249 - Phf11d protein_coding retained_intron MGP_NODShiLtJ_T0100089.1 MGP_NODShiLtJ_G0038483.1 mouse_genomes_project 14 13906155 13906272 - Gm24912 snoRNA snoRNA MGP_NODShiLtJ_T0009879.1 MGP_NODShiLtJ_G0008012.1 mouse_genomes_project 14 3978724 3978809 + Mir5124b miRNA miRNA MGP_NODShiLtJ_T0038713.1 MGP_NODShiLtJ_G0021023.1 mouse_genomes_project 14 32104330 32119027 - MGP_NODShiLtJ_P0038713 Ghitm protein_coding protein_coding MGP_NODShiLtJ_T0038714.1 MGP_NODShiLtJ_G0021023.1 mouse_genomes_project 14 32104330 32119210 - MGP_NODShiLtJ_P0038714 Ghitm protein_coding protein_coding MGP_NODShiLtJ_T0038429.1 MGP_NODShiLtJ_G0020945.1 mouse_genomes_project 14 25249549 25266558 - MGP_NODShiLtJ_P0038429 Itih3 protein_coding protein_coding MGP_NODShiLtJ_T0038430.1 MGP_NODShiLtJ_G0020945.1 mouse_genomes_project 14 25249552 25266385 - Itih3 protein_coding retained_intron MGP_NODShiLtJ_T0038431.1 MGP_NODShiLtJ_G0020945.1 mouse_genomes_project 14 25249659 25266347 - MGP_NODShiLtJ_P0038431 Itih3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038432.1 MGP_NODShiLtJ_G0020945.1 mouse_genomes_project 14 25249659 25266347 - MGP_NODShiLtJ_P0038432 Itih3 protein_coding protein_coding MGP_NODShiLtJ_T0038433.1 MGP_NODShiLtJ_G0020945.1 mouse_genomes_project 14 25250814 25256310 - MGP_NODShiLtJ_P0038433 Itih3 protein_coding protein_coding MGP_NODShiLtJ_T0038434.1 MGP_NODShiLtJ_G0020945.1 mouse_genomes_project 14 25252884 25255052 - Itih3 protein_coding retained_intron MGP_NODShiLtJ_T0039860.1 MGP_NODShiLtJ_G0021404.1 mouse_genomes_project 14 74069097 74123494 - MGP_NODShiLtJ_P0039860 Lrrc63 protein_coding protein_coding MGP_NODShiLtJ_T0000890.1 MGP_NODShiLtJ_G0000819.1 mouse_genomes_project 14 49372194 49374534 - TEC TEC MGP_NODShiLtJ_T0038650.1 MGP_NODShiLtJ_G0020994.1 mouse_genomes_project 14 28512517 28518611 + MGP_NODShiLtJ_P0038650 Gdf2 protein_coding protein_coding MGP_NODShiLtJ_T0006614.1 MGP_NODShiLtJ_G0005460.1 mouse_genomes_project 14 22643463 22647877 - Gm2670 lincRNA lincRNA MGP_NODShiLtJ_T0009917.1 MGP_NODShiLtJ_G0008050.1 mouse_genomes_project 14 74279814 74279917 + Gm44482 miRNA miRNA MGP_NODShiLtJ_T0039981.1 MGP_NODShiLtJ_G0021452.1 mouse_genomes_project 14 105589116 105603240 - MGP_NODShiLtJ_P0039981 Mzt1 protein_coding protein_coding MGP_NODShiLtJ_T0038919.1 MGP_NODShiLtJ_G0021100.1 mouse_genomes_project 14 47632269 47633784 - MGP_NODShiLtJ_P0038919 A930018M24Rik protein_coding protein_coding MGP_NODShiLtJ_T0012847.1 MGP_NODShiLtJ_G0010955.1 mouse_genomes_project 14 118167 118990 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038337.1 MGP_NODShiLtJ_G0020917.1 mouse_genomes_project 14 20587098 20606041 + MGP_NODShiLtJ_P0038337 Arf4 protein_coding protein_coding MGP_NODShiLtJ_T0038338.1 MGP_NODShiLtJ_G0020917.1 mouse_genomes_project 14 20587250 20605584 + MGP_NODShiLtJ_P0038338 Arf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038339.1 MGP_NODShiLtJ_G0020917.1 mouse_genomes_project 14 20587277 20605591 + Arf4 protein_coding processed_transcript MGP_NODShiLtJ_T0038340.1 MGP_NODShiLtJ_G0020917.1 mouse_genomes_project 14 20587371 20605597 + MGP_NODShiLtJ_P0038340 Arf4 protein_coding protein_coding MGP_NODShiLtJ_T0038341.1 MGP_NODShiLtJ_G0020917.1 mouse_genomes_project 14 20601793 20602640 + Arf4 protein_coding retained_intron MGP_NODShiLtJ_T0038342.1 MGP_NODShiLtJ_G0020917.1 mouse_genomes_project 14 20601913 20614607 + MGP_NODShiLtJ_P0038342 Arf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0097944.1 MGP_NODShiLtJ_G0036356.1 mouse_genomes_project 14 89979121 89979221 + Gm26405 rRNA rRNA MGP_NODShiLtJ_T0100091.1 MGP_NODShiLtJ_G0038485.1 mouse_genomes_project 14 21592985 21593083 - Gm25697 snoRNA snoRNA MGP_NODShiLtJ_T0040101.1 MGP_NODShiLtJ_G0021495.1 mouse_genomes_project 14 131005889 131847531 + MGP_NODShiLtJ_P0040101 Hs6st3 protein_coding protein_coding MGP_NODShiLtJ_T0002546.1 MGP_NODShiLtJ_G0002443.1 mouse_genomes_project 14 49613401 49614255 + MGP_NODShiLtJ_P0002546 Trav2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002547.1 MGP_NODShiLtJ_G0002443.1 mouse_genomes_project 14 49613496 49614255 + MGP_NODShiLtJ_P0002547 Trav2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002445.1 MGP_NODShiLtJ_G0002353.1 mouse_genomes_project 14 51444652 51444661 + MGP_NODShiLtJ_P0002445 Trdd1 TR_D_gene TR_D_gene MGP_NODShiLtJ_T0002446.1 MGP_NODShiLtJ_G0002353.1 mouse_genomes_project 14 51444652 51444663 + Trdd1 TR_D_gene processed_transcript MGP_NODShiLtJ_T0097936.1 MGP_NODShiLtJ_G0036348.1 mouse_genomes_project 14 23189806 23189910 - Gm23999 rRNA rRNA MGP_NODShiLtJ_T0006671.1 MGP_NODShiLtJ_G0005503.1 mouse_genomes_project 14 126243660 126247509 + Mir17hg lincRNA lincRNA MGP_NODShiLtJ_T0100090.1 MGP_NODShiLtJ_G0038484.1 mouse_genomes_project 14 20435260 20435391 + Gm24031 snoRNA snoRNA MGP_NODShiLtJ_T0097946.1 MGP_NODShiLtJ_G0036358.1 mouse_genomes_project 14 119396750 119396861 + n-R5s50 rRNA rRNA MGP_NODShiLtJ_T0006626.1 MGP_NODShiLtJ_G0005471.1 mouse_genomes_project 14 42971378 42974882 - Gm10101 lincRNA lincRNA MGP_NODShiLtJ_T0006627.1 MGP_NODShiLtJ_G0005471.1 mouse_genomes_project 14 42971383 42974882 - Gm10101 lincRNA lincRNA MGP_NODShiLtJ_T0011266.1 MGP_NODShiLtJ_G0009399.1 mouse_genomes_project 14 59779984 59780121 + Gm27972 misc_RNA misc_RNA MGP_NODShiLtJ_T0012891.1 MGP_NODShiLtJ_G0010999.1 mouse_genomes_project 14 50891192 50891628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039387.1 MGP_NODShiLtJ_G0021231.1 mouse_genomes_project 14 54116294 54166719 - MGP_NODShiLtJ_P0039387 Cenpj protein_coding protein_coding MGP_NODShiLtJ_T0039388.1 MGP_NODShiLtJ_G0021231.1 mouse_genomes_project 14 54116316 54159433 - MGP_NODShiLtJ_P0039388 Cenpj protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098867.1 MGP_NODShiLtJ_G0037261.1 mouse_genomes_project 14 111826183 111826290 + Gm22021 snRNA snRNA MGP_NODShiLtJ_T0039196.1 MGP_NODShiLtJ_G0021171.1 mouse_genomes_project 14 52341480 52369560 - MGP_NODShiLtJ_P0039196 protein_coding protein_coding MGP_NODShiLtJ_T0039197.1 MGP_NODShiLtJ_G0021171.1 mouse_genomes_project 14 52341480 52368385 - MGP_NODShiLtJ_P0039197 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039198.1 MGP_NODShiLtJ_G0021171.1 mouse_genomes_project 14 52360395 52361230 - protein_coding retained_intron MGP_NODShiLtJ_T0039199.1 MGP_NODShiLtJ_G0021171.1 mouse_genomes_project 14 52366901 52369494 - MGP_NODShiLtJ_P0039199 protein_coding protein_coding MGP_NODShiLtJ_T0039200.1 MGP_NODShiLtJ_G0021171.1 mouse_genomes_project 14 52366901 52369524 - MGP_NODShiLtJ_P0039200 protein_coding protein_coding MGP_NODShiLtJ_T0039201.1 MGP_NODShiLtJ_G0021171.1 mouse_genomes_project 14 52368209 52369846 - MGP_NODShiLtJ_P0039201 protein_coding protein_coding MGP_NODShiLtJ_T0038903.1 MGP_NODShiLtJ_G0021084.1 mouse_genomes_project 14 47059152 47226696 + MGP_NODShiLtJ_P0038903 protein_coding protein_coding MGP_NODShiLtJ_T0038533.1 MGP_NODShiLtJ_G0020965.1 mouse_genomes_project 14 25914875 25981039 - MGP_NODShiLtJ_P0038533 Colq protein_coding protein_coding MGP_NODShiLtJ_T0038534.1 MGP_NODShiLtJ_G0020965.1 mouse_genomes_project 14 25914953 25949943 - MGP_NODShiLtJ_P0038534 Colq protein_coding protein_coding MGP_NODShiLtJ_T0038536.1 MGP_NODShiLtJ_G0020965.1 mouse_genomes_project 14 25944665 25997055 - MGP_NODShiLtJ_P0038536 Colq protein_coding protein_coding MGP_NODShiLtJ_T0038537.1 MGP_NODShiLtJ_G0020965.1 mouse_genomes_project 14 25982038 25997031 - Colq protein_coding processed_transcript MGP_NODShiLtJ_T0038538.1 MGP_NODShiLtJ_G0020965.1 mouse_genomes_project 14 25992484 25997020 - Colq protein_coding processed_transcript MGP_NODShiLtJ_T0000908.1 MGP_NODShiLtJ_G0000837.1 mouse_genomes_project 14 111132931 111134647 + TEC TEC MGP_NODShiLtJ_T0012851.1 MGP_NODShiLtJ_G0010959.1 mouse_genomes_project 14 5734116 5734452 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038155.1 MGP_NODShiLtJ_G0020873.1 mouse_genomes_project 14 14287123 14359164 - MGP_NODShiLtJ_P0038155 Usp54 protein_coding protein_coding MGP_NODShiLtJ_T0038156.1 MGP_NODShiLtJ_G0020873.1 mouse_genomes_project 14 14287123 14348002 - MGP_NODShiLtJ_P0038156 Usp54 protein_coding protein_coding MGP_NODShiLtJ_T0038157.1 MGP_NODShiLtJ_G0020873.1 mouse_genomes_project 14 14316588 14325423 - MGP_NODShiLtJ_P0038157 Usp54 protein_coding protein_coding MGP_NODShiLtJ_T0038158.1 MGP_NODShiLtJ_G0020873.1 mouse_genomes_project 14 14320577 14346104 - Usp54 protein_coding retained_intron MGP_NODShiLtJ_T0038159.1 MGP_NODShiLtJ_G0020873.1 mouse_genomes_project 14 14322633 14359164 - Usp54 protein_coding retained_intron MGP_NODShiLtJ_T0006652.1 MGP_NODShiLtJ_G0005490.1 mouse_genomes_project 14 61011582 61090553 + 4931440J10Rik lincRNA lincRNA MGP_NODShiLtJ_T0009906.1 MGP_NODShiLtJ_G0008039.1 mouse_genomes_project 14 61132889 61132999 + Mir6541 miRNA miRNA MGP_NODShiLtJ_T0038302.1 MGP_NODShiLtJ_G0020910.1 mouse_genomes_project 14 20100153 20113992 + MGP_NODShiLtJ_P0038302 protein_coding protein_coding MGP_NODShiLtJ_T0038305.1 MGP_NODShiLtJ_G0020910.1 mouse_genomes_project 14 20100205 20113983 + MGP_NODShiLtJ_P0038305 protein_coding protein_coding MGP_NODShiLtJ_T0039511.1 MGP_NODShiLtJ_G0021275.1 mouse_genomes_project 14 59032118 59108390 - MGP_NODShiLtJ_P0039511 Tnfrsf19 protein_coding protein_coding MGP_NODShiLtJ_T0039512.1 MGP_NODShiLtJ_G0021275.1 mouse_genomes_project 14 59032118 59117815 - MGP_NODShiLtJ_P0039512 Tnfrsf19 protein_coding protein_coding MGP_NODShiLtJ_T0006636.1 MGP_NODShiLtJ_G0005476.1 mouse_genomes_project 14 48255418 48271058 + lincRNA lincRNA MGP_NODShiLtJ_T0039770.1 MGP_NODShiLtJ_G0021377.1 mouse_genomes_project 14 69031570 69036324 - MGP_NODShiLtJ_P0039770 Polr3d protein_coding protein_coding MGP_NODShiLtJ_T0039771.1 MGP_NODShiLtJ_G0021377.1 mouse_genomes_project 14 69031570 69036080 - MGP_NODShiLtJ_P0039771 Polr3d protein_coding protein_coding MGP_NODShiLtJ_T0039562.1 MGP_NODShiLtJ_G0021299.1 mouse_genomes_project 14 61504466 61561803 - MGP_NODShiLtJ_P0039562 Gata4 protein_coding protein_coding MGP_NODShiLtJ_T0039563.1 MGP_NODShiLtJ_G0021299.1 mouse_genomes_project 14 61504470 61561823 - MGP_NODShiLtJ_P0039563 Gata4 protein_coding protein_coding MGP_NODShiLtJ_T0039564.1 MGP_NODShiLtJ_G0021299.1 mouse_genomes_project 14 61557653 61590060 - MGP_NODShiLtJ_P0039564 Gata4 protein_coding protein_coding MGP_NODShiLtJ_T0039565.1 MGP_NODShiLtJ_G0021299.1 mouse_genomes_project 14 61557666 61589490 - MGP_NODShiLtJ_P0039565 Gata4 protein_coding protein_coding MGP_NODShiLtJ_T0039566.1 MGP_NODShiLtJ_G0021299.1 mouse_genomes_project 14 61557666 61589490 - MGP_NODShiLtJ_P0039566 Gata4 protein_coding protein_coding MGP_NODShiLtJ_T0039391.1 MGP_NODShiLtJ_G0021233.1 mouse_genomes_project 14 54267487 54296944 + MGP_NODShiLtJ_P0039391 Mphosph8 protein_coding protein_coding MGP_NODShiLtJ_T0039392.1 MGP_NODShiLtJ_G0021233.1 mouse_genomes_project 14 54271745 54273491 + Mphosph8 protein_coding processed_transcript MGP_NODShiLtJ_T0039393.1 MGP_NODShiLtJ_G0021233.1 mouse_genomes_project 14 54287894 54290763 + Mphosph8 protein_coding processed_transcript MGP_NODShiLtJ_T0039394.1 MGP_NODShiLtJ_G0021233.1 mouse_genomes_project 14 54292651 54296941 + Mphosph8 protein_coding processed_transcript MGP_NODShiLtJ_T0039395.1 MGP_NODShiLtJ_G0021233.1 mouse_genomes_project 14 54292937 54296942 + Mphosph8 protein_coding processed_transcript MGP_NODShiLtJ_T0039500.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58678948 58742277 + MGP_NODShiLtJ_P0039500 Spata13 protein_coding protein_coding MGP_NODShiLtJ_T0039501.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58679681 58742318 + MGP_NODShiLtJ_P0039501 Spata13 protein_coding protein_coding MGP_NODShiLtJ_T0039502.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58679702 58741803 + Spata13 protein_coding processed_transcript MGP_NODShiLtJ_T0039503.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58741730 58820214 + MGP_NODShiLtJ_P0039503 Spata13 protein_coding protein_coding MGP_NODShiLtJ_T0039504.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58742884 58761362 + MGP_NODShiLtJ_P0039504 Spata13 protein_coding protein_coding MGP_NODShiLtJ_T0039505.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58754745 58758667 + Spata13 protein_coding processed_transcript MGP_NODShiLtJ_T0039506.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58758525 58804293 + MGP_NODShiLtJ_P0039506 Spata13 protein_coding protein_coding MGP_NODShiLtJ_T0039507.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58786588 58820203 + MGP_NODShiLtJ_P0039507 Spata13 protein_coding protein_coding MGP_NODShiLtJ_T0039508.1 MGP_NODShiLtJ_G0021272.1 mouse_genomes_project 14 58805353 58818320 + Spata13 protein_coding retained_intron MGP_NODShiLtJ_T0100142.1 MGP_NODShiLtJ_G0038536.1 mouse_genomes_project 14 130076104 130076232 + Gm23669 snoRNA snoRNA MGP_NODShiLtJ_T0006628.1 MGP_NODShiLtJ_G0005472.1 mouse_genomes_project 14 45022868 45167303 + Otx2os1 lincRNA lincRNA MGP_NODShiLtJ_T0006629.1 MGP_NODShiLtJ_G0005472.1 mouse_genomes_project 14 45023739 45079282 + Otx2os1 lincRNA lincRNA MGP_NODShiLtJ_T0006630.1 MGP_NODShiLtJ_G0005472.1 mouse_genomes_project 14 45023844 45075947 + Otx2os1 lincRNA lincRNA MGP_NODShiLtJ_T0038658.1 MGP_NODShiLtJ_G0021001.1 mouse_genomes_project 14 28721357 28729855 - MGP_NODShiLtJ_P0038658 Npy4r protein_coding protein_coding MGP_NODShiLtJ_T0003511.1 MGP_NODShiLtJ_G0003187.1 mouse_genomes_project 14 62444011 62448946 - 4930471C04Rik antisense antisense MGP_NODShiLtJ_T0012882.1 MGP_NODShiLtJ_G0010990.1 mouse_genomes_project 14 47319296 47319579 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039586.1 MGP_NODShiLtJ_G0021309.1 mouse_genomes_project 14 62413288 62424715 - MGP_NODShiLtJ_P0039586 Prss55 protein_coding protein_coding MGP_NODShiLtJ_T0039587.1 MGP_NODShiLtJ_G0021309.1 mouse_genomes_project 14 62413295 62424672 - MGP_NODShiLtJ_P0039587 Prss55 protein_coding protein_coding MGP_NODShiLtJ_T0039588.1 MGP_NODShiLtJ_G0021309.1 mouse_genomes_project 14 62417214 62430438 - Prss55 protein_coding processed_transcript MGP_NODShiLtJ_T0002622.1 MGP_NODShiLtJ_G0002505.1 mouse_genomes_project 14 51476621 51477254 - MGP_NODShiLtJ_P0002622 Trdv5 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0017294.1 MGP_NODShiLtJ_G0015157.1 mouse_genomes_project 14 135216691 135231351 + 4930594M22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017295.1 MGP_NODShiLtJ_G0015157.1 mouse_genomes_project 14 135216728 135233103 + 4930594M22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017296.1 MGP_NODShiLtJ_G0015157.1 mouse_genomes_project 14 135216736 135241117 + 4930594M22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0012850.1 MGP_NODShiLtJ_G0010958.1 mouse_genomes_project 14 3869016 3869842 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017290.1 MGP_NODShiLtJ_G0015155.1 mouse_genomes_project 14 134329846 134334799 - A330035P11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017291.1 MGP_NODShiLtJ_G0015155.1 mouse_genomes_project 14 134332222 134334820 - A330035P11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0038012.1 MGP_NODShiLtJ_G0020826.1 mouse_genomes_project 14 800764 1041021 - MGP_NODShiLtJ_P0038012 4930452B06Rik protein_coding protein_coding MGP_NODShiLtJ_T0039383.1 MGP_NODShiLtJ_G0021227.1 mouse_genomes_project 14 53772605 53777911 - MGP_NODShiLtJ_P0039383 Gzmc protein_coding protein_coding MGP_NODShiLtJ_T0038294.1 MGP_NODShiLtJ_G0020906.1 mouse_genomes_project 14 20081695 20085368 - MGP_NODShiLtJ_P0038294 protein_coding protein_coding MGP_NODShiLtJ_T0038297.1 MGP_NODShiLtJ_G0020906.1 mouse_genomes_project 14 20081865 20084946 - MGP_NODShiLtJ_P0038297 protein_coding protein_coding MGP_NODShiLtJ_T0038298.1 MGP_NODShiLtJ_G0020906.1 mouse_genomes_project 14 20082445 20085339 - MGP_NODShiLtJ_P0038298 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038299.1 MGP_NODShiLtJ_G0020906.1 mouse_genomes_project 14 20082452 20083484 - protein_coding retained_intron MGP_NODShiLtJ_T0038916.1 MGP_NODShiLtJ_G0021097.1 mouse_genomes_project 14 47544127 47559383 + MGP_NODShiLtJ_P0038916 Parp2 protein_coding protein_coding MGP_NODShiLtJ_T0002673.1 MGP_NODShiLtJ_G0002546.1 mouse_genomes_project 14 50350010 50350290 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0039378.1 MGP_NODShiLtJ_G0021222.1 mouse_genomes_project 14 53620439 53623444 - MGP_NODShiLtJ_P0039378 Gzme protein_coding protein_coding MGP_NODShiLtJ_T0038719.1 MGP_NODShiLtJ_G0021025.1 mouse_genomes_project 14 36688935 36766254 - MGP_NODShiLtJ_P0038719 Sh2d4b protein_coding protein_coding MGP_NODShiLtJ_T0002460.1 MGP_NODShiLtJ_G0002365.1 mouse_genomes_project 14 51487179 51487242 + MGP_NODShiLtJ_P0002460 Traj56 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0003481.1 MGP_NODShiLtJ_G0003163.1 mouse_genomes_project 14 26775897 26777948 - Gm17210 antisense antisense MGP_NODShiLtJ_T0100133.1 MGP_NODShiLtJ_G0038527.1 mouse_genomes_project 14 107221415 107221539 - Gm24345 snoRNA snoRNA MGP_NODShiLtJ_T0039373.1 MGP_NODShiLtJ_G0021217.1 mouse_genomes_project 14 53538902 53541414 + MGP_NODShiLtJ_P0039373 Mcpt2 protein_coding protein_coding MGP_NODShiLtJ_T0006646.1 MGP_NODShiLtJ_G0005485.1 mouse_genomes_project 14 59740333 59750495 - lincRNA lincRNA MGP_NODShiLtJ_T0039801.1 MGP_NODShiLtJ_G0021391.1 mouse_genomes_project 14 69512221 69605771 + MGP_NODShiLtJ_P0039801 Gfra2 protein_coding protein_coding MGP_NODShiLtJ_T0038059.1 MGP_NODShiLtJ_G0020845.1 mouse_genomes_project 14 7917159 8117315 + MGP_NODShiLtJ_P0038059 Nek10 protein_coding protein_coding MGP_NODShiLtJ_T0038060.1 MGP_NODShiLtJ_G0020845.1 mouse_genomes_project 14 7917209 8126215 + MGP_NODShiLtJ_P0038060 Nek10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038061.1 MGP_NODShiLtJ_G0020845.1 mouse_genomes_project 14 7917209 8121572 + MGP_NODShiLtJ_P0038061 Nek10 protein_coding protein_coding MGP_NODShiLtJ_T0038062.1 MGP_NODShiLtJ_G0020845.1 mouse_genomes_project 14 7965868 8081777 + Nek10 protein_coding processed_transcript MGP_NODShiLtJ_T0038063.1 MGP_NODShiLtJ_G0020845.1 mouse_genomes_project 14 7970164 8083527 + Nek10 protein_coding retained_intron MGP_NODShiLtJ_T0038064.1 MGP_NODShiLtJ_G0020845.1 mouse_genomes_project 14 8040161 8121622 + MGP_NODShiLtJ_P0038064 Nek10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038905.1 MGP_NODShiLtJ_G0021086.1 mouse_genomes_project 14 47120151 47121087 + MGP_NODShiLtJ_P0038905 Olfr740 protein_coding protein_coding MGP_NODShiLtJ_T0009904.1 MGP_NODShiLtJ_G0008037.1 mouse_genomes_project 14 59757447 59757531 - Mir15a miRNA miRNA MGP_NODShiLtJ_T0000906.1 MGP_NODShiLtJ_G0000835.1 mouse_genomes_project 14 96490477 96490847 + TEC TEC MGP_NODShiLtJ_T0012886.1 MGP_NODShiLtJ_G0010994.1 mouse_genomes_project 14 49367430 49368194 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101656.1 MGP_NODShiLtJ_G0039825.1 mouse_genomes_project 14 137274455 137274740 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101061.1 MGP_NODShiLtJ_G0039424.1 mouse_genomes_project 14 56731880 56732363 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101062.1 MGP_NODShiLtJ_G0039424.1 mouse_genomes_project 14 56732284 56733276 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0039415.1 MGP_NODShiLtJ_G0021246.1 mouse_genomes_project 14 55119307 55223180 + MGP_NODShiLtJ_P0039415 Ift88 protein_coding protein_coding MGP_NODShiLtJ_T0039416.1 MGP_NODShiLtJ_G0021246.1 mouse_genomes_project 14 55119325 55137196 + MGP_NODShiLtJ_P0039416 Ift88 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039417.1 MGP_NODShiLtJ_G0021246.1 mouse_genomes_project 14 55119351 55223180 + Ift88 protein_coding retained_intron MGP_NODShiLtJ_T0039418.1 MGP_NODShiLtJ_G0021246.1 mouse_genomes_project 14 55142953 55182270 + MGP_NODShiLtJ_P0039418 Ift88 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039419.1 MGP_NODShiLtJ_G0021246.1 mouse_genomes_project 14 55183946 55191810 + Ift88 protein_coding retained_intron MGP_NODShiLtJ_T0038720.1 MGP_NODShiLtJ_G0021026.1 mouse_genomes_project 14 36782962 36846884 - MGP_NODShiLtJ_P0038720 Tspan14 protein_coding protein_coding MGP_NODShiLtJ_T0100088.1 MGP_NODShiLtJ_G0038482.1 mouse_genomes_project 14 12253920 12254055 + Gm22499 snoRNA snoRNA MGP_NODShiLtJ_T0039968.1 MGP_NODShiLtJ_G0021448.1 mouse_genomes_project 14 97172864 98456390 - MGP_NODShiLtJ_P0039968 Pcdh9 protein_coding protein_coding MGP_NODShiLtJ_T0039969.1 MGP_NODShiLtJ_G0021448.1 mouse_genomes_project 14 97178760 98456390 - MGP_NODShiLtJ_P0039969 Pcdh9 protein_coding protein_coding MGP_NODShiLtJ_T0039970.1 MGP_NODShiLtJ_G0021448.1 mouse_genomes_project 14 97179266 98456350 - MGP_NODShiLtJ_P0039970 Pcdh9 protein_coding protein_coding MGP_NODShiLtJ_T0039971.1 MGP_NODShiLtJ_G0021448.1 mouse_genomes_project 14 97179493 98455880 - MGP_NODShiLtJ_P0039971 Pcdh9 protein_coding protein_coding MGP_NODShiLtJ_T0039972.1 MGP_NODShiLtJ_G0021448.1 mouse_genomes_project 14 97180807 98454459 - MGP_NODShiLtJ_P0039972 Pcdh9 protein_coding protein_coding MGP_NODShiLtJ_T0039973.1 MGP_NODShiLtJ_G0021448.1 mouse_genomes_project 14 97408511 98451475 - MGP_NODShiLtJ_P0039973 Pcdh9 protein_coding protein_coding MGP_NODShiLtJ_T0039974.1 MGP_NODShiLtJ_G0021448.1 mouse_genomes_project 14 98451291 98451951 - Pcdh9 protein_coding retained_intron MGP_NODShiLtJ_T0039975.1 MGP_NODShiLtJ_G0021448.1 mouse_genomes_project 14 98451839 98456400 - MGP_NODShiLtJ_P0039975 Pcdh9 protein_coding protein_coding MGP_NODShiLtJ_T0038777.1 MGP_NODShiLtJ_G0021046.1 mouse_genomes_project 14 42906961 42917715 + MGP_NODShiLtJ_P0038777 Cdkn3 protein_coding protein_coding MGP_NODShiLtJ_T0038778.1 MGP_NODShiLtJ_G0021046.1 mouse_genomes_project 14 42907060 42917677 + MGP_NODShiLtJ_P0038778 Cdkn3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101654.1 MGP_NODShiLtJ_G0039823.1 mouse_genomes_project 14 47951370 48082876 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000902.1 MGP_NODShiLtJ_G0000831.1 mouse_genomes_project 14 68135463 68137779 - TEC TEC MGP_NODShiLtJ_T0006673.1 MGP_NODShiLtJ_G0005505.1 mouse_genomes_project 14 130141806 130163710 + Gm26791 lincRNA lincRNA MGP_NODShiLtJ_T0003487.1 MGP_NODShiLtJ_G0003169.1 mouse_genomes_project 14 42519009 42520768 + Gm15222 antisense antisense MGP_NODShiLtJ_T0100131.1 MGP_NODShiLtJ_G0038525.1 mouse_genomes_project 14 104721150 104721231 - Gm26006 snoRNA snoRNA MGP_NODShiLtJ_T0038288.1 MGP_NODShiLtJ_G0020905.1 mouse_genomes_project 14 20041913 20056825 - MGP_NODShiLtJ_P0038288 protein_coding protein_coding MGP_NODShiLtJ_T0038289.1 MGP_NODShiLtJ_G0020905.1 mouse_genomes_project 14 20042296 20044791 - MGP_NODShiLtJ_P0038289 protein_coding protein_coding MGP_NODShiLtJ_T0038290.1 MGP_NODShiLtJ_G0020905.1 mouse_genomes_project 14 20042296 20056199 - MGP_NODShiLtJ_P0038290 protein_coding protein_coding MGP_NODShiLtJ_T0038292.1 MGP_NODShiLtJ_G0020905.1 mouse_genomes_project 14 20042340 20056201 - MGP_NODShiLtJ_P0038292 protein_coding protein_coding MGP_NODShiLtJ_T0002455.1 MGP_NODShiLtJ_G0002362.1 mouse_genomes_project 14 51484084 51484146 + MGP_NODShiLtJ_P0002455 Traj59 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002456.1 MGP_NODShiLtJ_G0002362.1 mouse_genomes_project 14 51484084 51484148 + Traj59 TR_J_gene processed_transcript MGP_NODShiLtJ_T0009890.1 MGP_NODShiLtJ_G0008023.1 mouse_genomes_project 14 24880902 24880962 + Mir3076 miRNA miRNA MGP_NODShiLtJ_T0017289.1 MGP_NODShiLtJ_G0015154.1 mouse_genomes_project 14 130958442 130976304 + Gm16835 processed_transcript processed_transcript MGP_NODShiLtJ_T0038373.1 MGP_NODShiLtJ_G0020932.1 mouse_genomes_project 14 24226660 24233425 + MGP_NODShiLtJ_P0038373 Selk protein_coding protein_coding MGP_NODShiLtJ_T0038374.1 MGP_NODShiLtJ_G0020932.1 mouse_genomes_project 14 24226788 24231948 + Selk protein_coding processed_transcript MGP_NODShiLtJ_T0040143.1 MGP_NODShiLtJ_G0021515.1 mouse_genomes_project 14 135111488 135216782 - MGP_NODShiLtJ_P0040143 Ggact protein_coding protein_coding MGP_NODShiLtJ_T0040146.1 MGP_NODShiLtJ_G0021515.1 mouse_genomes_project 14 135193547 135216824 - MGP_NODShiLtJ_P0040146 Ggact protein_coding protein_coding MGP_NODShiLtJ_T0040147.1 MGP_NODShiLtJ_G0021515.1 mouse_genomes_project 14 135193558 135194395 - MGP_NODShiLtJ_P0040147 Ggact protein_coding protein_coding MGP_NODShiLtJ_T0040148.1 MGP_NODShiLtJ_G0021515.1 mouse_genomes_project 14 135194124 135217419 - MGP_NODShiLtJ_P0040148 Ggact protein_coding protein_coding MGP_NODShiLtJ_T0040149.1 MGP_NODShiLtJ_G0021515.1 mouse_genomes_project 14 135194173 135216747 - MGP_NODShiLtJ_P0040149 Ggact protein_coding protein_coding MGP_NODShiLtJ_T0038055.1 MGP_NODShiLtJ_G0020842.1 mouse_genomes_project 14 7452501 7453598 + MGP_NODShiLtJ_P0038055 Olfr721-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0038056.1 MGP_NODShiLtJ_G0020842.1 mouse_genomes_project 14 7452623 7453598 + MGP_NODShiLtJ_P0038056 Olfr721-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0038943.1 MGP_NODShiLtJ_G0021105.1 mouse_genomes_project 14 47759083 47762091 + MGP_NODShiLtJ_P0038943 Rnase10 protein_coding protein_coding MGP_NODShiLtJ_T0038944.1 MGP_NODShiLtJ_G0021105.1 mouse_genomes_project 14 47759261 47762091 + MGP_NODShiLtJ_P0038944 Rnase10 protein_coding protein_coding MGP_NODShiLtJ_T0002476.1 MGP_NODShiLtJ_G0002379.1 mouse_genomes_project 14 51508592 51508655 + MGP_NODShiLtJ_P0002476 Traj39 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002492.1 MGP_NODShiLtJ_G0002395.1 mouse_genomes_project 14 51526642 51526702 + MGP_NODShiLtJ_P0002492 Traj22 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039745.1 MGP_NODShiLtJ_G0021372.1 mouse_genomes_project 14 68734795 68748588 - MGP_NODShiLtJ_P0039745 Pdlim2 protein_coding protein_coding MGP_NODShiLtJ_T0039746.1 MGP_NODShiLtJ_G0021372.1 mouse_genomes_project 14 68734943 68738545 - MGP_NODShiLtJ_P0039746 Pdlim2 protein_coding protein_coding MGP_NODShiLtJ_T0039747.1 MGP_NODShiLtJ_G0021372.1 mouse_genomes_project 14 68735179 68738679 - MGP_NODShiLtJ_P0039747 Pdlim2 protein_coding protein_coding MGP_NODShiLtJ_T0039748.1 MGP_NODShiLtJ_G0021372.1 mouse_genomes_project 14 68738469 68747245 - MGP_NODShiLtJ_P0039748 Pdlim2 protein_coding protein_coding MGP_NODShiLtJ_T0039749.1 MGP_NODShiLtJ_G0021372.1 mouse_genomes_project 14 68738495 68748631 - Pdlim2 protein_coding retained_intron MGP_NODShiLtJ_T0039750.1 MGP_NODShiLtJ_G0021372.1 mouse_genomes_project 14 68740197 68747238 - Pdlim2 protein_coding retained_intron MGP_NODShiLtJ_T0039751.1 MGP_NODShiLtJ_G0021372.1 mouse_genomes_project 14 68742286 68747232 - Pdlim2 protein_coding retained_intron MGP_NODShiLtJ_T0039752.1 MGP_NODShiLtJ_G0021372.1 mouse_genomes_project 14 68742364 68742839 - Pdlim2 protein_coding retained_intron MGP_NODShiLtJ_T0038266.1 MGP_NODShiLtJ_G0020897.1 mouse_genomes_project 14 18566806 18613311 - MGP_NODShiLtJ_P0038266 Polr3a protein_coding protein_coding MGP_NODShiLtJ_T0038267.1 MGP_NODShiLtJ_G0020897.1 mouse_genomes_project 14 18567186 18613297 - MGP_NODShiLtJ_P0038267 Polr3a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006604.1 MGP_NODShiLtJ_G0005455.1 mouse_genomes_project 14 19013094 19017115 + Gm10398 lincRNA lincRNA MGP_NODShiLtJ_T0038510.1 MGP_NODShiLtJ_G0020956.1 mouse_genomes_project 14 25588478 25591952 + MGP_NODShiLtJ_P0038510 Tnnc1 protein_coding protein_coding MGP_NODShiLtJ_T0038511.1 MGP_NODShiLtJ_G0020956.1 mouse_genomes_project 14 25588496 25591859 + MGP_NODShiLtJ_P0038511 Tnnc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038512.1 MGP_NODShiLtJ_G0020956.1 mouse_genomes_project 14 25588498 25591221 + Tnnc1 protein_coding retained_intron MGP_NODShiLtJ_T0038755.1 MGP_NODShiLtJ_G0021041.1 mouse_genomes_project 14 41393440 41406256 - MGP_NODShiLtJ_P0038755 Gnpnat1 protein_coding protein_coding MGP_NODShiLtJ_T0006601.1 MGP_NODShiLtJ_G0005453.1 mouse_genomes_project 14 18749981 18754107 + 4931403M11Rik lincRNA lincRNA MGP_NODShiLtJ_T0011261.1 MGP_NODShiLtJ_G0009394.1 mouse_genomes_project 14 36089377 36089556 - Gm22726 misc_RNA misc_RNA MGP_NODShiLtJ_T0039570.1 MGP_NODShiLtJ_G0021302.1 mouse_genomes_project 14 61814619 61831309 - MGP_NODShiLtJ_P0039570 Tdh protein_coding protein_coding MGP_NODShiLtJ_T0039571.1 MGP_NODShiLtJ_G0021302.1 mouse_genomes_project 14 61814924 61822560 - MGP_NODShiLtJ_P0039571 Tdh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039572.1 MGP_NODShiLtJ_G0021302.1 mouse_genomes_project 14 61814979 61822560 - MGP_NODShiLtJ_P0039572 Tdh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039573.1 MGP_NODShiLtJ_G0021302.1 mouse_genomes_project 14 61814979 61822560 - MGP_NODShiLtJ_P0039573 Tdh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039574.1 MGP_NODShiLtJ_G0021302.1 mouse_genomes_project 14 61817918 61819440 - Tdh protein_coding retained_intron MGP_NODShiLtJ_T0039575.1 MGP_NODShiLtJ_G0021302.1 mouse_genomes_project 14 61826126 61830973 - Tdh protein_coding processed_transcript MGP_NODShiLtJ_T0000885.1 MGP_NODShiLtJ_G0000814.1 mouse_genomes_project 14 15851617 15855749 + TEC TEC MGP_NODShiLtJ_T0038054.1 MGP_NODShiLtJ_G0020841.1 mouse_genomes_project 14 7375179 7384175 + MGP_NODShiLtJ_P0038054 Il3ra protein_coding protein_coding MGP_NODShiLtJ_T0038067.1 MGP_NODShiLtJ_G0020847.1 mouse_genomes_project 14 9413751 9424841 - MGP_NODShiLtJ_P0038067 Oxsm protein_coding protein_coding MGP_NODShiLtJ_T0038068.1 MGP_NODShiLtJ_G0020847.1 mouse_genomes_project 14 9414996 9418413 - MGP_NODShiLtJ_P0038068 Oxsm protein_coding protein_coding MGP_NODShiLtJ_T0038069.1 MGP_NODShiLtJ_G0020847.1 mouse_genomes_project 14 9415715 9424209 - MGP_NODShiLtJ_P0038069 Oxsm protein_coding protein_coding MGP_NODShiLtJ_T0038070.1 MGP_NODShiLtJ_G0020847.1 mouse_genomes_project 14 9417254 9424207 - MGP_NODShiLtJ_P0038070 Oxsm protein_coding protein_coding MGP_NODShiLtJ_T0039606.1 MGP_NODShiLtJ_G0021315.1 mouse_genomes_project 14 63327092 63419612 + MGP_NODShiLtJ_P0039606 Ints9 protein_coding protein_coding MGP_NODShiLtJ_T0038737.1 MGP_NODShiLtJ_G0021034.1 mouse_genomes_project 14 40744875 40754279 - MGP_NODShiLtJ_P0038737 Ptgdr protein_coding protein_coding MGP_NODShiLtJ_T0039626.1 MGP_NODShiLtJ_G0021326.1 mouse_genomes_project 14 64257703 64287110 + MGP_NODShiLtJ_P0039626 Ccdc25 protein_coding protein_coding MGP_NODShiLtJ_T0098859.1 MGP_NODShiLtJ_G0037253.1 mouse_genomes_project 14 88058385 88058525 + Gm25115 snRNA snRNA MGP_NODShiLtJ_T0038820.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43908788 44003541 + MGP_NODShiLtJ_P0038820 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038821.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43909655 44003541 + MGP_NODShiLtJ_P0038821 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038822.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43909660 43924566 + MGP_NODShiLtJ_P0038822 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038823.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43909738 44003548 + MGP_NODShiLtJ_P0038823 Ktn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038824.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924006 44003547 + MGP_NODShiLtJ_P0038824 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038825.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003268 + MGP_NODShiLtJ_P0038825 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038826.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038826 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038827.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003277 + MGP_NODShiLtJ_P0038827 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038828.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038828 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038829.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038829 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038830.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038830 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038831.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003273 + MGP_NODShiLtJ_P0038831 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038832.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003271 + MGP_NODShiLtJ_P0038832 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038833.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003263 + MGP_NODShiLtJ_P0038833 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038834.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038834 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038835.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038835 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038836.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038836 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038837.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038837 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038838.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003275 + MGP_NODShiLtJ_P0038838 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038839.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003277 + MGP_NODShiLtJ_P0038839 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038840.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43924037 44003272 + MGP_NODShiLtJ_P0038840 Ktn1 protein_coding protein_coding MGP_NODShiLtJ_T0038841.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43964514 43968260 + Ktn1 protein_coding retained_intron MGP_NODShiLtJ_T0038842.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43969476 43980528 + Ktn1 protein_coding retained_intron MGP_NODShiLtJ_T0038843.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43979769 43991888 + Ktn1 protein_coding retained_intron MGP_NODShiLtJ_T0038844.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43991771 43993247 + Ktn1 protein_coding retained_intron MGP_NODShiLtJ_T0038845.1 MGP_NODShiLtJ_G0021059.1 mouse_genomes_project 14 43996662 44003545 + Ktn1 protein_coding retained_intron MGP_NODShiLtJ_T0012901.1 MGP_NODShiLtJ_G0011009.1 mouse_genomes_project 14 58185367 58185572 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100111.1 MGP_NODShiLtJ_G0038505.1 mouse_genomes_project 14 60885730 60885862 - Gm23816 snoRNA snoRNA MGP_NODShiLtJ_T0038311.1 MGP_NODShiLtJ_G0020913.1 mouse_genomes_project 14 20143079 20150427 + MGP_NODShiLtJ_P0038311 protein_coding protein_coding MGP_NODShiLtJ_T0038316.1 MGP_NODShiLtJ_G0020913.1 mouse_genomes_project 14 20146638 20153778 + MGP_NODShiLtJ_P0038316 protein_coding protein_coding MGP_NODShiLtJ_T0017268.1 MGP_NODShiLtJ_G0015146.1 mouse_genomes_project 14 71968141 71981655 - Gm17233 processed_transcript processed_transcript MGP_NODShiLtJ_T0100119.1 MGP_NODShiLtJ_G0038513.1 mouse_genomes_project 14 75044402 75044536 - Gm25517 snoRNA snoRNA MGP_NODShiLtJ_T0006622.1 MGP_NODShiLtJ_G0005467.1 mouse_genomes_project 14 42039953 42073235 + lincRNA lincRNA MGP_NODShiLtJ_T0002599.1 MGP_NODShiLtJ_G0002488.1 mouse_genomes_project 14 50729888 50730465 + MGP_NODShiLtJ_P0002599 Trav13-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002578.1 MGP_NODShiLtJ_G0002470.1 mouse_genomes_project 14 50353725 50812309 + MGP_NODShiLtJ_P0002578 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038252.1 MGP_NODShiLtJ_G0020895.1 mouse_genomes_project 14 18190630 18234338 - MGP_NODShiLtJ_P0038252 Dlg5 protein_coding protein_coding MGP_NODShiLtJ_T0038253.1 MGP_NODShiLtJ_G0020895.1 mouse_genomes_project 14 18190630 18307616 - MGP_NODShiLtJ_P0038253 Dlg5 protein_coding protein_coding MGP_NODShiLtJ_T0038254.1 MGP_NODShiLtJ_G0020895.1 mouse_genomes_project 14 18190630 18202879 - MGP_NODShiLtJ_P0038254 Dlg5 protein_coding protein_coding MGP_NODShiLtJ_T0038255.1 MGP_NODShiLtJ_G0020895.1 mouse_genomes_project 14 18190632 18307616 - MGP_NODShiLtJ_P0038255 Dlg5 protein_coding protein_coding MGP_NODShiLtJ_T0038256.1 MGP_NODShiLtJ_G0020895.1 mouse_genomes_project 14 18201072 18207192 - MGP_NODShiLtJ_P0038256 Dlg5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038257.1 MGP_NODShiLtJ_G0020895.1 mouse_genomes_project 14 18202971 18205455 - Dlg5 protein_coding retained_intron MGP_NODShiLtJ_T0038258.1 MGP_NODShiLtJ_G0020895.1 mouse_genomes_project 14 18210968 18213904 - Dlg5 protein_coding retained_intron MGP_NODShiLtJ_T0038259.1 MGP_NODShiLtJ_G0020895.1 mouse_genomes_project 14 18247849 18306561 - MGP_NODShiLtJ_P0038259 Dlg5 protein_coding protein_coding MGP_NODShiLtJ_T0009881.1 MGP_NODShiLtJ_G0008014.1 mouse_genomes_project 14 11534982 11535061 + Gm44469 miRNA miRNA MGP_NODShiLtJ_T0039568.1 MGP_NODShiLtJ_G0021301.1 mouse_genomes_project 14 61761445 61790289 + MGP_NODShiLtJ_P0039568 Fam167a protein_coding protein_coding MGP_NODShiLtJ_T0039569.1 MGP_NODShiLtJ_G0021301.1 mouse_genomes_project 14 61761460 61766842 + Fam167a protein_coding retained_intron MGP_NODShiLtJ_T0006638.1 MGP_NODShiLtJ_G0005478.1 mouse_genomes_project 14 49187291 49204647 + Gm26590 lincRNA lincRNA MGP_NODShiLtJ_T0039042.1 MGP_NODShiLtJ_G0021129.1 mouse_genomes_project 14 49252752 49272473 - MGP_NODShiLtJ_P0039042 Rab2b protein_coding protein_coding MGP_NODShiLtJ_T0039043.1 MGP_NODShiLtJ_G0021129.1 mouse_genomes_project 14 49252759 49272226 - MGP_NODShiLtJ_P0039043 Rab2b protein_coding protein_coding MGP_NODShiLtJ_T0039044.1 MGP_NODShiLtJ_G0021129.1 mouse_genomes_project 14 49252762 49260098 - Rab2b protein_coding retained_intron MGP_NODShiLtJ_T0039045.1 MGP_NODShiLtJ_G0021129.1 mouse_genomes_project 14 49252764 49272267 - MGP_NODShiLtJ_P0039045 Rab2b protein_coding protein_coding MGP_NODShiLtJ_T0039046.1 MGP_NODShiLtJ_G0021129.1 mouse_genomes_project 14 49254704 49271601 - Rab2b protein_coding processed_transcript MGP_NODShiLtJ_T0039047.1 MGP_NODShiLtJ_G0021129.1 mouse_genomes_project 14 49254704 49272169 - MGP_NODShiLtJ_P0039047 Rab2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039048.1 MGP_NODShiLtJ_G0021129.1 mouse_genomes_project 14 49254704 49272169 - MGP_NODShiLtJ_P0039048 Rab2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039049.1 MGP_NODShiLtJ_G0021129.1 mouse_genomes_project 14 49255744 49267475 - MGP_NODShiLtJ_P0039049 Rab2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038653.1 MGP_NODShiLtJ_G0020997.1 mouse_genomes_project 14 28611105 28617039 + MGP_NODShiLtJ_P0038653 Gm5460 protein_coding protein_coding MGP_NODShiLtJ_T0040114.1 MGP_NODShiLtJ_G0021503.1 mouse_genomes_project 14 133698446 133982435 - MGP_NODShiLtJ_P0040114 Dock9 protein_coding protein_coding MGP_NODShiLtJ_T0040115.1 MGP_NODShiLtJ_G0021503.1 mouse_genomes_project 14 133698446 133872249 - MGP_NODShiLtJ_P0040115 Dock9 protein_coding protein_coding MGP_NODShiLtJ_T0040116.1 MGP_NODShiLtJ_G0021503.1 mouse_genomes_project 14 133699910 133749080 - MGP_NODShiLtJ_P0040116 Dock9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040117.1 MGP_NODShiLtJ_G0021503.1 mouse_genomes_project 14 133752290 133872145 - MGP_NODShiLtJ_P0040117 Dock9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038360.1 MGP_NODShiLtJ_G0020925.1 mouse_genomes_project 14 21278709 21450185 + MGP_NODShiLtJ_P0038360 Arhgef3 protein_coding protein_coding MGP_NODShiLtJ_T0038361.1 MGP_NODShiLtJ_G0020925.1 mouse_genomes_project 14 21382303 21450200 + MGP_NODShiLtJ_P0038361 Arhgef3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039280.1 MGP_NODShiLtJ_G0021189.1 mouse_genomes_project 14 53028160 53032712 - MGP_NODShiLtJ_P0039280 Emc9 protein_coding protein_coding MGP_NODShiLtJ_T0039281.1 MGP_NODShiLtJ_G0021189.1 mouse_genomes_project 14 53028165 53029069 - Emc9 protein_coding retained_intron MGP_NODShiLtJ_T0039282.1 MGP_NODShiLtJ_G0021189.1 mouse_genomes_project 14 53028166 53033068 - MGP_NODShiLtJ_P0039282 Emc9 protein_coding protein_coding MGP_NODShiLtJ_T0039283.1 MGP_NODShiLtJ_G0021189.1 mouse_genomes_project 14 53031137 53032977 - Emc9 protein_coding retained_intron MGP_NODShiLtJ_T0040131.1 MGP_NODShiLtJ_G0021513.1 mouse_genomes_project 14 134758221 134759736 + MGP_NODShiLtJ_P0040131 Gm10837 protein_coding protein_coding MGP_NODShiLtJ_T0002680.1 MGP_NODShiLtJ_G0002553.1 mouse_genomes_project 14 51257102 51257721 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0101653.1 MGP_NODShiLtJ_G0039822.1 mouse_genomes_project 14 47033720 47034003 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0039640.1 MGP_NODShiLtJ_G0021332.1 mouse_genomes_project 14 64589149 64617302 + MGP_NODShiLtJ_P0039640 Chrna2 protein_coding protein_coding MGP_NODShiLtJ_T0039641.1 MGP_NODShiLtJ_G0021332.1 mouse_genomes_project 14 64595043 64619083 + MGP_NODShiLtJ_P0039641 Chrna2 protein_coding protein_coding MGP_NODShiLtJ_T0039607.1 MGP_NODShiLtJ_G0021316.1 mouse_genomes_project 14 63432506 63480390 - MGP_NODShiLtJ_P0039607 Extl3 protein_coding protein_coding MGP_NODShiLtJ_T0039728.1 MGP_NODShiLtJ_G0021363.1 mouse_genomes_project 14 68223921 68235033 - MGP_NODShiLtJ_P0039728 R3hcc1 protein_coding protein_coding MGP_NODShiLtJ_T0039729.1 MGP_NODShiLtJ_G0021363.1 mouse_genomes_project 14 68223922 68234942 - MGP_NODShiLtJ_P0039729 R3hcc1 protein_coding protein_coding MGP_NODShiLtJ_T0039730.1 MGP_NODShiLtJ_G0021363.1 mouse_genomes_project 14 68224946 68226636 - R3hcc1 protein_coding retained_intron MGP_NODShiLtJ_T0039731.1 MGP_NODShiLtJ_G0021363.1 mouse_genomes_project 14 68230092 68232762 - R3hcc1 protein_coding retained_intron MGP_NODShiLtJ_T0039732.1 MGP_NODShiLtJ_G0021363.1 mouse_genomes_project 14 68233073 68235002 - R3hcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0039180.1 MGP_NODShiLtJ_G0021164.1 mouse_genomes_project 14 52278071 52282907 + MGP_NODShiLtJ_P0039180 Bcl2l2 protein_coding protein_coding MGP_NODShiLtJ_T0039181.1 MGP_NODShiLtJ_G0021164.1 mouse_genomes_project 14 52278075 52278754 + Bcl2l2 protein_coding retained_intron MGP_NODShiLtJ_T0039183.1 MGP_NODShiLtJ_G0021164.1 mouse_genomes_project 14 52278150 52280226 + MGP_NODShiLtJ_P0039183 Bcl2l2 protein_coding protein_coding MGP_NODShiLtJ_T0039184.1 MGP_NODShiLtJ_G0021164.1 mouse_genomes_project 14 52278201 52282768 + MGP_NODShiLtJ_P0039184 Bcl2l2 protein_coding protein_coding MGP_NODShiLtJ_T0039367.1 MGP_NODShiLtJ_G0021212.1 mouse_genomes_project 14 53351800 53357141 - MGP_NODShiLtJ_P0039367 Cbln3 protein_coding protein_coding MGP_NODShiLtJ_T0039368.1 MGP_NODShiLtJ_G0021212.1 mouse_genomes_project 14 53354941 53357117 - MGP_NODShiLtJ_P0039368 Cbln3 protein_coding protein_coding MGP_NODShiLtJ_T0039111.1 MGP_NODShiLtJ_G0021145.1 mouse_genomes_project 14 51773419 51776271 + MGP_NODShiLtJ_P0039111 Mrpl52 protein_coding protein_coding MGP_NODShiLtJ_T0039112.1 MGP_NODShiLtJ_G0021145.1 mouse_genomes_project 14 51773432 51774289 + Mrpl52 protein_coding retained_intron MGP_NODShiLtJ_T0039113.1 MGP_NODShiLtJ_G0021145.1 mouse_genomes_project 14 51773433 51773949 + Mrpl52 protein_coding retained_intron MGP_NODShiLtJ_T0039114.1 MGP_NODShiLtJ_G0021145.1 mouse_genomes_project 14 51773482 51776264 + MGP_NODShiLtJ_P0039114 Mrpl52 protein_coding protein_coding MGP_NODShiLtJ_T0039115.1 MGP_NODShiLtJ_G0021145.1 mouse_genomes_project 14 51773550 51776261 + Mrpl52 protein_coding retained_intron MGP_NODShiLtJ_T0039116.1 MGP_NODShiLtJ_G0021145.1 mouse_genomes_project 14 51773561 51776264 + MGP_NODShiLtJ_P0039116 Mrpl52 protein_coding protein_coding MGP_NODShiLtJ_T0038377.1 MGP_NODShiLtJ_G0020934.1 mouse_genomes_project 14 24255763 24268431 - MGP_NODShiLtJ_P0038377 Il17rb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038378.1 MGP_NODShiLtJ_G0020934.1 mouse_genomes_project 14 24255790 24268514 - MGP_NODShiLtJ_P0038378 Il17rb protein_coding protein_coding MGP_NODShiLtJ_T0038379.1 MGP_NODShiLtJ_G0020934.1 mouse_genomes_project 14 24255790 24268514 - MGP_NODShiLtJ_P0038379 Il17rb protein_coding protein_coding MGP_NODShiLtJ_T0038380.1 MGP_NODShiLtJ_G0020934.1 mouse_genomes_project 14 24255821 24268427 - MGP_NODShiLtJ_P0038380 Il17rb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038381.1 MGP_NODShiLtJ_G0020934.1 mouse_genomes_project 14 24256246 24268409 - MGP_NODShiLtJ_P0038381 Il17rb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100109.1 MGP_NODShiLtJ_G0038503.1 mouse_genomes_project 14 56484719 56484852 - Gm25614 snoRNA snoRNA MGP_NODShiLtJ_T0098274.1 MGP_NODShiLtJ_G0036682.1 mouse_genomes_project 14 18298522 18305087 - Gm17105 sense_intronic sense_intronic MGP_NODShiLtJ_T0039138.1 MGP_NODShiLtJ_G0021153.1 mouse_genomes_project 14 51974123 51978013 - MGP_NODShiLtJ_P0039138 Psmb5 protein_coding protein_coding MGP_NODShiLtJ_T0039859.1 MGP_NODShiLtJ_G0021403.1 mouse_genomes_project 14 73997293 74033951 + MGP_NODShiLtJ_P0039859 5031414D18Rik protein_coding protein_coding MGP_NODShiLtJ_T0012930.1 MGP_NODShiLtJ_G0011038.1 mouse_genomes_project 14 136454680 136455221 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012885.1 MGP_NODShiLtJ_G0010993.1 mouse_genomes_project 14 49367426 49368193 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039338.1 MGP_NODShiLtJ_G0021197.1 mouse_genomes_project 14 53109768 53112397 - MGP_NODShiLtJ_P0039338 Mdp1 protein_coding protein_coding MGP_NODShiLtJ_T0038760.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41638243 41705586 - MGP_NODShiLtJ_P0038760 Ddhd1 protein_coding protein_coding MGP_NODShiLtJ_T0038761.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41638554 41667334 - Ddhd1 protein_coding retained_intron MGP_NODShiLtJ_T0038762.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41639724 41705541 - MGP_NODShiLtJ_P0038762 Ddhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038763.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41639724 41705541 - MGP_NODShiLtJ_P0038763 Ddhd1 protein_coding protein_coding MGP_NODShiLtJ_T0038764.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41639795 41669252 - Ddhd1 protein_coding retained_intron MGP_NODShiLtJ_T0038765.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41640012 41647806 - MGP_NODShiLtJ_P0038765 Ddhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038766.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41640405 41666791 - MGP_NODShiLtJ_P0038766 Ddhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038767.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41640495 41705585 - MGP_NODShiLtJ_P0038767 Ddhd1 protein_coding protein_coding MGP_NODShiLtJ_T0038768.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41650089 41654444 - Ddhd1 protein_coding retained_intron MGP_NODShiLtJ_T0038769.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41666716 41704844 - Ddhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0038770.1 MGP_NODShiLtJ_G0021043.1 mouse_genomes_project 14 41674407 41704861 - Ddhd1 protein_coding retained_intron MGP_NODShiLtJ_T0038215.1 MGP_NODShiLtJ_G0020889.1 mouse_genomes_project 14 15601449 15643569 + MGP_NODShiLtJ_P0038215 Samd8 protein_coding protein_coding MGP_NODShiLtJ_T0038216.1 MGP_NODShiLtJ_G0020889.1 mouse_genomes_project 14 15601466 15643569 + MGP_NODShiLtJ_P0038216 Samd8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038217.1 MGP_NODShiLtJ_G0020889.1 mouse_genomes_project 14 15601478 15643507 + MGP_NODShiLtJ_P0038217 Samd8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038218.1 MGP_NODShiLtJ_G0020889.1 mouse_genomes_project 14 15602470 15650866 + MGP_NODShiLtJ_P0038218 Samd8 protein_coding protein_coding MGP_NODShiLtJ_T0038219.1 MGP_NODShiLtJ_G0020889.1 mouse_genomes_project 14 15642132 15643241 + Samd8 protein_coding retained_intron MGP_NODShiLtJ_T0002486.1 MGP_NODShiLtJ_G0002389.1 mouse_genomes_project 14 51520159 51520224 + MGP_NODShiLtJ_P0002486 Traj28 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0009882.1 MGP_NODShiLtJ_G0008015.1 mouse_genomes_project 14 14445208 14445277 + Mir6946 miRNA miRNA MGP_NODShiLtJ_T0039612.1 MGP_NODShiLtJ_G0021319.1 mouse_genomes_project 14 63740661 63781077 + MGP_NODShiLtJ_P0039612 Zfp395 protein_coding protein_coding MGP_NODShiLtJ_T0003532.1 MGP_NODShiLtJ_G0003201.1 mouse_genomes_project 14 134478410 134482742 - 1700108J01Rik antisense antisense MGP_NODShiLtJ_T0098846.1 MGP_NODShiLtJ_G0037240.1 mouse_genomes_project 14 49342374 49342478 + Gm26328 snRNA snRNA MGP_NODShiLtJ_T0038176.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14810525 14831558 - MGP_NODShiLtJ_P0038176 Ap3m1 protein_coding protein_coding MGP_NODShiLtJ_T0038177.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14810542 14813650 - Ap3m1 protein_coding processed_transcript MGP_NODShiLtJ_T0038178.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14810617 14813864 - Ap3m1 protein_coding processed_transcript MGP_NODShiLtJ_T0038179.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14815097 14831330 - MGP_NODShiLtJ_P0038179 Ap3m1 protein_coding protein_coding MGP_NODShiLtJ_T0038180.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14817214 14831295 - MGP_NODShiLtJ_P0038180 Ap3m1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038181.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14817258 14831571 - Ap3m1 protein_coding processed_transcript MGP_NODShiLtJ_T0038182.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14820097 14831185 - Ap3m1 protein_coding processed_transcript MGP_NODShiLtJ_T0038183.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14820124 14831616 - MGP_NODShiLtJ_P0038183 Ap3m1 protein_coding protein_coding MGP_NODShiLtJ_T0038184.1 MGP_NODShiLtJ_G0020884.1 mouse_genomes_project 14 14823761 14831228 - MGP_NODShiLtJ_P0038184 Ap3m1 protein_coding protein_coding MGP_NODShiLtJ_T0003464.1 MGP_NODShiLtJ_G0003153.1 mouse_genomes_project 14 14282838 14303217 + 1810062O18Rik antisense antisense MGP_NODShiLtJ_T0003465.1 MGP_NODShiLtJ_G0003153.1 mouse_genomes_project 14 14282873 14308755 + 1810062O18Rik antisense antisense MGP_NODShiLtJ_T0003466.1 MGP_NODShiLtJ_G0003153.1 mouse_genomes_project 14 14283016 14303185 + 1810062O18Rik antisense antisense MGP_NODShiLtJ_T0003467.1 MGP_NODShiLtJ_G0003153.1 mouse_genomes_project 14 14283052 14308895 + 1810062O18Rik antisense antisense MGP_NODShiLtJ_T0003468.1 MGP_NODShiLtJ_G0003153.1 mouse_genomes_project 14 14303222 14308902 + 1810062O18Rik antisense antisense MGP_NODShiLtJ_T0038363.1 MGP_NODShiLtJ_G0020927.1 mouse_genomes_project 14 21537344 21564395 - MGP_NODShiLtJ_P0038363 Ccdc66 protein_coding protein_coding MGP_NODShiLtJ_T0003516.1 MGP_NODShiLtJ_G0003192.1 mouse_genomes_project 14 68019504 68040645 + Gm27175 antisense antisense MGP_NODShiLtJ_T0002609.1 MGP_NODShiLtJ_G0002496.1 mouse_genomes_project 14 51089395 51089872 + MGP_NODShiLtJ_P0002609 Trav17 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002610.1 MGP_NODShiLtJ_G0002496.1 mouse_genomes_project 14 51089395 51089872 + MGP_NODShiLtJ_P0002610 Trav17 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012896.1 MGP_NODShiLtJ_G0011004.1 mouse_genomes_project 14 54403404 54403575 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003498.1 MGP_NODShiLtJ_G0003178.1 mouse_genomes_project 14 52482893 52485681 + Zfhx2os antisense antisense MGP_NODShiLtJ_T0040118.1 MGP_NODShiLtJ_G0021504.1 mouse_genomes_project 14 134081124 134229641 + MGP_NODShiLtJ_P0040118 Ubac2 protein_coding protein_coding MGP_NODShiLtJ_T0039881.1 MGP_NODShiLtJ_G0021411.1 mouse_genomes_project 14 74743306 74798530 - MGP_NODShiLtJ_P0039881 Cog3 protein_coding protein_coding MGP_NODShiLtJ_T0039882.1 MGP_NODShiLtJ_G0021411.1 mouse_genomes_project 14 74744986 74798475 - MGP_NODShiLtJ_P0039882 Cog3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038621.1 MGP_NODShiLtJ_G0020988.1 mouse_genomes_project 14 27509915 27535428 + MGP_NODShiLtJ_P0038621 Lrrc18 protein_coding protein_coding MGP_NODShiLtJ_T0038622.1 MGP_NODShiLtJ_G0020988.1 mouse_genomes_project 14 27509931 27529528 + MGP_NODShiLtJ_P0038622 Lrrc18 protein_coding protein_coding MGP_NODShiLtJ_T0038623.1 MGP_NODShiLtJ_G0020988.1 mouse_genomes_project 14 27509936 27528810 + MGP_NODShiLtJ_P0038623 Lrrc18 protein_coding protein_coding MGP_NODShiLtJ_T0038624.1 MGP_NODShiLtJ_G0020988.1 mouse_genomes_project 14 27509979 27528971 + MGP_NODShiLtJ_P0038624 Lrrc18 protein_coding protein_coding MGP_NODShiLtJ_T0038625.1 MGP_NODShiLtJ_G0020988.1 mouse_genomes_project 14 27509991 27534291 + MGP_NODShiLtJ_P0038625 Lrrc18 protein_coding protein_coding MGP_NODShiLtJ_T0038626.1 MGP_NODShiLtJ_G0020988.1 mouse_genomes_project 14 27514683 27528591 + Lrrc18 protein_coding processed_transcript MGP_NODShiLtJ_T0038610.1 MGP_NODShiLtJ_G0020981.1 mouse_genomes_project 14 27004118 27067675 + MGP_NODShiLtJ_P0038610 Ercc6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006631.1 MGP_NODShiLtJ_G0005473.1 mouse_genomes_project 14 46660441 46667847 + lincRNA lincRNA MGP_NODShiLtJ_T0038739.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41116880 41215907 - MGP_NODShiLtJ_P0038739 Txndc16 protein_coding protein_coding MGP_NODShiLtJ_T0038740.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41117331 41215938 - MGP_NODShiLtJ_P0038740 Txndc16 protein_coding protein_coding MGP_NODShiLtJ_T0038741.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41117339 41218147 - MGP_NODShiLtJ_P0038741 Txndc16 protein_coding protein_coding MGP_NODShiLtJ_T0038742.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41153290 41157795 - Txndc16 protein_coding retained_intron MGP_NODShiLtJ_T0038743.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41155824 41215903 - Txndc16 protein_coding retained_intron MGP_NODShiLtJ_T0038744.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41156693 41215895 - Txndc16 protein_coding retained_intron MGP_NODShiLtJ_T0038745.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41202134 41215910 - MGP_NODShiLtJ_P0038745 Txndc16 protein_coding protein_coding MGP_NODShiLtJ_T0038746.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41203413 41215915 - Txndc16 protein_coding retained_intron MGP_NODShiLtJ_T0038747.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41208373 41215877 - Txndc16 protein_coding processed_transcript MGP_NODShiLtJ_T0038748.1 MGP_NODShiLtJ_G0021036.1 mouse_genomes_project 14 41214400 41215903 - Txndc16 protein_coding processed_transcript MGP_NODShiLtJ_T0000894.1 MGP_NODShiLtJ_G0000823.1 mouse_genomes_project 14 59798532 59805868 - TEC TEC MGP_NODShiLtJ_T0009892.1 MGP_NODShiLtJ_G0008025.1 mouse_genomes_project 14 40889135 40889204 - Mir327 miRNA miRNA MGP_NODShiLtJ_T0040107.1 MGP_NODShiLtJ_G0021499.1 mouse_genomes_project 14 132973579 133010825 + MGP_NODShiLtJ_P0040107 Ipo5 protein_coding protein_coding MGP_NODShiLtJ_T0012883.1 MGP_NODShiLtJ_G0010991.1 mouse_genomes_project 14 47495312 47496325 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012849.1 MGP_NODShiLtJ_G0010957.1 mouse_genomes_project 14 2416678 2417282 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011256.1 MGP_NODShiLtJ_G0009389.1 mouse_genomes_project 14 15064150 15064386 + Gm26372 misc_RNA misc_RNA MGP_NODShiLtJ_T0039422.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55293725 55387518 - MGP_NODShiLtJ_P0039422 protein_coding protein_coding MGP_NODShiLtJ_T0039423.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55294994 55387044 - MGP_NODShiLtJ_P0039423 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039424.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55296105 55387044 - MGP_NODShiLtJ_P0039424 protein_coding protein_coding MGP_NODShiLtJ_T0039425.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55313784 55387080 - MGP_NODShiLtJ_P0039425 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039426.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55349414 55387044 - MGP_NODShiLtJ_P0039426 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039427.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55361789 55387052 - protein_coding processed_transcript MGP_NODShiLtJ_T0039428.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55361795 55387323 - protein_coding retained_intron MGP_NODShiLtJ_T0039429.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55361810 55387055 - protein_coding retained_intron MGP_NODShiLtJ_T0039430.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55362039 55387518 - MGP_NODShiLtJ_P0039430 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039432.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55362620 55368762 - protein_coding retained_intron MGP_NODShiLtJ_T0039433.1 MGP_NODShiLtJ_G0021249.1 mouse_genomes_project 14 55368066 55387077 - protein_coding retained_intron MGP_NODShiLtJ_T0006649.1 MGP_NODShiLtJ_G0005488.1 mouse_genomes_project 14 60395343 60397781 - Gm26969 lincRNA lincRNA MGP_NODShiLtJ_T0038617.1 MGP_NODShiLtJ_G0020985.1 mouse_genomes_project 14 27340072 27342900 + MGP_NODShiLtJ_P0038617 Fam170b protein_coding protein_coding MGP_NODShiLtJ_T0100141.1 MGP_NODShiLtJ_G0038535.1 mouse_genomes_project 14 119019446 119019576 - Gm25901 snoRNA snoRNA MGP_NODShiLtJ_T0039414.1 MGP_NODShiLtJ_G0021245.1 mouse_genomes_project 14 54959889 55090502 - MGP_NODShiLtJ_P0039414 Cryl1 protein_coding protein_coding MGP_NODShiLtJ_T0012924.1 MGP_NODShiLtJ_G0011032.1 mouse_genomes_project 14 122859228 122859711 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039522.1 MGP_NODShiLtJ_G0021278.1 mouse_genomes_project 14 59389462 59391646 + MGP_NODShiLtJ_P0039522 Arl11 protein_coding protein_coding MGP_NODShiLtJ_T0039379.1 MGP_NODShiLtJ_G0021223.1 mouse_genomes_project 14 53641399 53644383 - MGP_NODShiLtJ_P0039379 Gzmd protein_coding protein_coding MGP_NODShiLtJ_T0003473.1 MGP_NODShiLtJ_G0003156.1 mouse_genomes_project 14 17024759 17086327 - Gm10248 antisense antisense MGP_NODShiLtJ_T0009908.1 MGP_NODShiLtJ_G0008041.1 mouse_genomes_project 14 62943509 62943594 + Mir124a-1 miRNA miRNA MGP_NODShiLtJ_T0003509.1 MGP_NODShiLtJ_G0003185.1 mouse_genomes_project 14 61815978 61822173 + Gm17232 antisense antisense MGP_NODShiLtJ_T0002561.1 MGP_NODShiLtJ_G0002455.1 mouse_genomes_project 14 49844737 49845286 + MGP_NODShiLtJ_P0002561 Trav8d-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039176.1 MGP_NODShiLtJ_G0021163.1 mouse_genomes_project 14 52257803 52261262 - Ppp1r3e protein_coding processed_transcript MGP_NODShiLtJ_T0039177.1 MGP_NODShiLtJ_G0021163.1 mouse_genomes_project 14 52257815 52265547 - MGP_NODShiLtJ_P0039177 Ppp1r3e protein_coding protein_coding MGP_NODShiLtJ_T0039178.1 MGP_NODShiLtJ_G0021163.1 mouse_genomes_project 14 52263592 52264618 - Ppp1r3e protein_coding TEC MGP_NODShiLtJ_T0039179.1 MGP_NODShiLtJ_G0021163.1 mouse_genomes_project 14 52263592 52265535 - MGP_NODShiLtJ_P0039179 Ppp1r3e protein_coding protein_coding MGP_NODShiLtJ_T0003479.1 MGP_NODShiLtJ_G0003161.1 mouse_genomes_project 14 20619536 20620034 + 9930004E17Rik antisense antisense MGP_NODShiLtJ_T0038090.1 MGP_NODShiLtJ_G0020854.1 mouse_genomes_project 14 11630439 11649757 + MGP_NODShiLtJ_P0038090 Nkiras1 protein_coding protein_coding MGP_NODShiLtJ_T0038091.1 MGP_NODShiLtJ_G0020854.1 mouse_genomes_project 14 11630489 11645788 + MGP_NODShiLtJ_P0038091 Nkiras1 protein_coding protein_coding MGP_NODShiLtJ_T0038092.1 MGP_NODShiLtJ_G0020854.1 mouse_genomes_project 14 11630507 11643068 + Nkiras1 protein_coding retained_intron MGP_NODShiLtJ_T0038093.1 MGP_NODShiLtJ_G0020854.1 mouse_genomes_project 14 11630514 11644150 + Nkiras1 protein_coding processed_transcript MGP_NODShiLtJ_T0038094.1 MGP_NODShiLtJ_G0020854.1 mouse_genomes_project 14 11630530 11646183 + MGP_NODShiLtJ_P0038094 Nkiras1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038095.1 MGP_NODShiLtJ_G0020854.1 mouse_genomes_project 14 11630541 11641411 + Nkiras1 protein_coding retained_intron MGP_NODShiLtJ_T0038096.1 MGP_NODShiLtJ_G0020854.1 mouse_genomes_project 14 11630567 11644291 + Nkiras1 protein_coding processed_transcript MGP_NODShiLtJ_T0100137.1 MGP_NODShiLtJ_G0038531.1 mouse_genomes_project 14 112261197 112261331 + Gm24280 snoRNA snoRNA MGP_NODShiLtJ_T0038860.1 MGP_NODShiLtJ_G0021063.1 mouse_genomes_project 14 45403184 45484865 - MGP_NODShiLtJ_P0038860 protein_coding protein_coding MGP_NODShiLtJ_T0038861.1 MGP_NODShiLtJ_G0021063.1 mouse_genomes_project 14 45406040 45484608 - MGP_NODShiLtJ_P0038861 protein_coding protein_coding MGP_NODShiLtJ_T0038862.1 MGP_NODShiLtJ_G0021063.1 mouse_genomes_project 14 45407759 45413186 - protein_coding retained_intron MGP_NODShiLtJ_T0038863.1 MGP_NODShiLtJ_G0021063.1 mouse_genomes_project 14 45409040 45416664 - MGP_NODShiLtJ_P0038863 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038864.1 MGP_NODShiLtJ_G0021063.1 mouse_genomes_project 14 45409746 45416928 - protein_coding retained_intron MGP_NODShiLtJ_T0038865.1 MGP_NODShiLtJ_G0021063.1 mouse_genomes_project 14 45424709 45430822 - protein_coding retained_intron MGP_NODShiLtJ_T0038866.1 MGP_NODShiLtJ_G0021063.1 mouse_genomes_project 14 45430426 45466742 - MGP_NODShiLtJ_P0038866 protein_coding protein_coding MGP_NODShiLtJ_T0011262.1 MGP_NODShiLtJ_G0009395.1 mouse_genomes_project 14 41487300 41487583 - Gm22637 misc_RNA misc_RNA MGP_NODShiLtJ_T0039567.1 MGP_NODShiLtJ_G0021300.1 mouse_genomes_project 14 61698029 61742373 - MGP_NODShiLtJ_P0039567 Blk protein_coding protein_coding MGP_NODShiLtJ_T0002595.1 MGP_NODShiLtJ_G0002484.1 mouse_genomes_project 14 50644551 50645089 + MGP_NODShiLtJ_P0002595 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039978.1 MGP_NODShiLtJ_G0021451.1 mouse_genomes_project 14 104071451 104604854 - MGP_NODShiLtJ_P0039978 Dach1 protein_coding protein_coding MGP_NODShiLtJ_T0039979.1 MGP_NODShiLtJ_G0021451.1 mouse_genomes_project 14 104071451 104604854 - MGP_NODShiLtJ_P0039979 Dach1 protein_coding protein_coding MGP_NODShiLtJ_T0039980.1 MGP_NODShiLtJ_G0021451.1 mouse_genomes_project 14 104122339 104605031 - Dach1 protein_coding retained_intron MGP_NODShiLtJ_T0040076.1 MGP_NODShiLtJ_G0021487.1 mouse_genomes_project 14 129897535 129929468 + MGP_NODShiLtJ_P0040076 Gpr180 protein_coding protein_coding MGP_NODShiLtJ_T0039910.1 MGP_NODShiLtJ_G0021420.1 mouse_genomes_project 14 76208113 76221036 - MGP_NODShiLtJ_P0039910 Lacc1 protein_coding protein_coding MGP_NODShiLtJ_T0039911.1 MGP_NODShiLtJ_G0021420.1 mouse_genomes_project 14 76216734 76221299 - Lacc1 protein_coding retained_intron MGP_NODShiLtJ_T0039912.1 MGP_NODShiLtJ_G0021420.1 mouse_genomes_project 14 76219344 76220476 - MGP_NODShiLtJ_P0039912 Lacc1 protein_coding protein_coding MGP_NODShiLtJ_T0040079.1 MGP_NODShiLtJ_G0021490.1 mouse_genomes_project 14 130267328 130512542 - MGP_NODShiLtJ_P0040079 Abcc4 protein_coding protein_coding MGP_NODShiLtJ_T0040080.1 MGP_NODShiLtJ_G0021490.1 mouse_genomes_project 14 130267328 130512542 - MGP_NODShiLtJ_P0040080 Abcc4 protein_coding protein_coding MGP_NODShiLtJ_T0038128.1 MGP_NODShiLtJ_G0020865.1 mouse_genomes_project 14 14031368 14064978 - MGP_NODShiLtJ_P0038128 Ecd protein_coding protein_coding MGP_NODShiLtJ_T0012911.1 MGP_NODShiLtJ_G0011019.1 mouse_genomes_project 14 73696848 73710605 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038168.1 MGP_NODShiLtJ_G0020879.1 mouse_genomes_project 14 14462844 14478795 + MGP_NODShiLtJ_P0038168 Zswim8 protein_coding protein_coding MGP_NODShiLtJ_T0039538.1 MGP_NODShiLtJ_G0021287.1 mouse_genomes_project 14 60784967 60819622 + Fam124a protein_coding processed_transcript MGP_NODShiLtJ_T0039539.1 MGP_NODShiLtJ_G0021287.1 mouse_genomes_project 14 60784967 60841528 + Fam124a protein_coding processed_transcript MGP_NODShiLtJ_T0039540.1 MGP_NODShiLtJ_G0021287.1 mouse_genomes_project 14 60784967 60843981 + MGP_NODShiLtJ_P0039540 Fam124a protein_coding protein_coding MGP_NODShiLtJ_T0039541.1 MGP_NODShiLtJ_G0021287.1 mouse_genomes_project 14 60785005 60794222 + Fam124a protein_coding processed_transcript MGP_NODShiLtJ_T0039608.1 MGP_NODShiLtJ_G0021317.1 mouse_genomes_project 14 63577773 63642541 - MGP_NODShiLtJ_P0039608 Fzd3 protein_coding protein_coding MGP_NODShiLtJ_T0039609.1 MGP_NODShiLtJ_G0021317.1 mouse_genomes_project 14 63586466 63606137 - Fzd3 protein_coding processed_transcript MGP_NODShiLtJ_T0009905.1 MGP_NODShiLtJ_G0008038.1 mouse_genomes_project 14 61098184 61098321 + Mir8098 miRNA miRNA MGP_NODShiLtJ_T0039943.1 MGP_NODShiLtJ_G0021438.1 mouse_genomes_project 14 78933558 79056217 + MGP_NODShiLtJ_P0039943 Elf1 protein_coding protein_coding MGP_NODShiLtJ_T0039944.1 MGP_NODShiLtJ_G0021438.1 mouse_genomes_project 14 78970802 79056216 + MGP_NODShiLtJ_P0039944 Elf1 protein_coding protein_coding MGP_NODShiLtJ_T0039407.1 MGP_NODShiLtJ_G0021240.1 mouse_genomes_project 14 54653782 54654199 + MGP_NODShiLtJ_P0039407 protein_coding protein_coding MGP_NODShiLtJ_T0098874.1 MGP_NODShiLtJ_G0037268.1 mouse_genomes_project 14 126174599 126174705 - Gm24073 snRNA snRNA MGP_NODShiLtJ_T0097763.1 MGP_NODShiLtJ_G0036175.1 mouse_genomes_project 14 14814837 14824859 - pseudogene pseudogene MGP_NODShiLtJ_T0017284.1 MGP_NODShiLtJ_G0015151.1 mouse_genomes_project 14 126642839 126659028 - 4930505G20Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0006594.1 MGP_NODShiLtJ_G0005448.1 mouse_genomes_project 14 8567346 8581955 + B230110C06Rik lincRNA lincRNA MGP_NODShiLtJ_T0006595.1 MGP_NODShiLtJ_G0005448.1 mouse_genomes_project 14 8567907 8581417 + B230110C06Rik lincRNA lincRNA MGP_NODShiLtJ_T0098847.1 MGP_NODShiLtJ_G0037241.1 mouse_genomes_project 14 51939048 51939160 + Gm24705 snRNA snRNA MGP_NODShiLtJ_T0000897.1 MGP_NODShiLtJ_G0000826.1 mouse_genomes_project 14 63207615 63211020 - TEC TEC MGP_NODShiLtJ_T0039267.1 MGP_NODShiLtJ_G0021187.1 mouse_genomes_project 14 53022258 53023595 + MGP_NODShiLtJ_P0039267 Fitm1 protein_coding protein_coding MGP_NODShiLtJ_T0002479.1 MGP_NODShiLtJ_G0002382.1 mouse_genomes_project 14 51512407 51512469 + MGP_NODShiLtJ_P0002479 Traj35 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038809.1 MGP_NODShiLtJ_G0021056.1 mouse_genomes_project 14 43605851 43612297 - MGP_NODShiLtJ_P0038809 Dlgap5 protein_coding protein_coding MGP_NODShiLtJ_T0038810.1 MGP_NODShiLtJ_G0021056.1 mouse_genomes_project 14 43606038 43639596 - MGP_NODShiLtJ_P0038810 Dlgap5 protein_coding protein_coding MGP_NODShiLtJ_T0038811.1 MGP_NODShiLtJ_G0021056.1 mouse_genomes_project 14 43606758 43639613 - Dlgap5 protein_coding retained_intron MGP_NODShiLtJ_T0038812.1 MGP_NODShiLtJ_G0021056.1 mouse_genomes_project 14 43607878 43639643 - Dlgap5 protein_coding retained_intron MGP_NODShiLtJ_T0038813.1 MGP_NODShiLtJ_G0021056.1 mouse_genomes_project 14 43611892 43614009 - Dlgap5 protein_coding retained_intron MGP_NODShiLtJ_T0038814.1 MGP_NODShiLtJ_G0021056.1 mouse_genomes_project 14 43616553 43631689 - MGP_NODShiLtJ_P0038814 Dlgap5 protein_coding protein_coding MGP_NODShiLtJ_T0038815.1 MGP_NODShiLtJ_G0021056.1 mouse_genomes_project 14 43635025 43639636 - Dlgap5 protein_coding retained_intron MGP_NODShiLtJ_T0038816.1 MGP_NODShiLtJ_G0021056.1 mouse_genomes_project 14 43635557 43637946 - Dlgap5 protein_coding processed_transcript MGP_NODShiLtJ_T0006653.1 MGP_NODShiLtJ_G0005491.1 mouse_genomes_project 14 61097372 61098671 - Gm26536 lincRNA lincRNA MGP_NODShiLtJ_T0039665.1 MGP_NODShiLtJ_G0021337.1 mouse_genomes_project 14 65274187 65286053 + MGP_NODShiLtJ_P0039665 Gm10032 protein_coding protein_coding MGP_NODShiLtJ_T0039929.1 MGP_NODShiLtJ_G0021430.1 mouse_genomes_project 14 78220259 78594456 + MGP_NODShiLtJ_P0039929 Vwa8 protein_coding protein_coding MGP_NODShiLtJ_T0039977.1 MGP_NODShiLtJ_G0021450.1 mouse_genomes_project 14 101736716 102287358 - MGP_NODShiLtJ_P0039977 Klhl1 protein_coding protein_coding MGP_NODShiLtJ_T0039498.1 MGP_NODShiLtJ_G0021270.1 mouse_genomes_project 14 58305064 58348181 + MGP_NODShiLtJ_P0039498 Mtmr6 protein_coding protein_coding MGP_NODShiLtJ_T0098832.1 MGP_NODShiLtJ_G0037226.1 mouse_genomes_project 14 15271976 15272068 + Gm25864 snRNA snRNA MGP_NODShiLtJ_T0039450.1 MGP_NODShiLtJ_G0021253.1 mouse_genomes_project 14 55561417 55564011 + MGP_NODShiLtJ_P0039450 Mrpl57 protein_coding protein_coding MGP_NODShiLtJ_T0038660.1 MGP_NODShiLtJ_G0021003.1 mouse_genomes_project 14 28804489 28807264 + Syt15 protein_coding retained_intron MGP_NODShiLtJ_T0038661.1 MGP_NODShiLtJ_G0021003.1 mouse_genomes_project 14 28804940 28812631 + MGP_NODShiLtJ_P0038661 Syt15 protein_coding protein_coding MGP_NODShiLtJ_T0038662.1 MGP_NODShiLtJ_G0021003.1 mouse_genomes_project 14 28804941 28815315 + MGP_NODShiLtJ_P0038662 Syt15 protein_coding protein_coding MGP_NODShiLtJ_T0038118.1 MGP_NODShiLtJ_G0020860.1 mouse_genomes_project 14 13526740 13667792 - MGP_NODShiLtJ_P0038118 Gng2 protein_coding protein_coding MGP_NODShiLtJ_T0038119.1 MGP_NODShiLtJ_G0020860.1 mouse_genomes_project 14 13529848 13667715 - MGP_NODShiLtJ_P0038119 Gng2 protein_coding protein_coding MGP_NODShiLtJ_T0038120.1 MGP_NODShiLtJ_G0020860.1 mouse_genomes_project 14 13529848 13668170 - MGP_NODShiLtJ_P0038120 Gng2 protein_coding protein_coding MGP_NODShiLtJ_T0038121.1 MGP_NODShiLtJ_G0020860.1 mouse_genomes_project 14 13529889 13667602 - MGP_NODShiLtJ_P0038121 Gng2 protein_coding protein_coding MGP_NODShiLtJ_T0038122.1 MGP_NODShiLtJ_G0020860.1 mouse_genomes_project 14 13529932 13667727 - MGP_NODShiLtJ_P0038122 Gng2 protein_coding protein_coding MGP_NODShiLtJ_T0038123.1 MGP_NODShiLtJ_G0020860.1 mouse_genomes_project 14 13529986 13667236 - MGP_NODShiLtJ_P0038123 Gng2 protein_coding protein_coding MGP_NODShiLtJ_T0039623.1 MGP_NODShiLtJ_G0021325.1 mouse_genomes_project 14 64237421 64253677 - MGP_NODShiLtJ_P0039623 Esco2 protein_coding protein_coding MGP_NODShiLtJ_T0039624.1 MGP_NODShiLtJ_G0021325.1 mouse_genomes_project 14 64244395 64245591 - Esco2 protein_coding processed_transcript MGP_NODShiLtJ_T0039625.1 MGP_NODShiLtJ_G0021325.1 mouse_genomes_project 14 64245344 64247261 - Esco2 protein_coding processed_transcript MGP_NODShiLtJ_T0039716.1 MGP_NODShiLtJ_G0021360.1 mouse_genomes_project 14 68072703 68103841 + MGP_NODShiLtJ_P0039716 Gm21685 protein_coding protein_coding MGP_NODShiLtJ_T0039717.1 MGP_NODShiLtJ_G0021360.1 mouse_genomes_project 14 68072719 68085930 + Gm21685 protein_coding retained_intron MGP_NODShiLtJ_T0039718.1 MGP_NODShiLtJ_G0021360.1 mouse_genomes_project 14 68072727 68085931 + MGP_NODShiLtJ_P0039718 Gm21685 protein_coding protein_coding MGP_NODShiLtJ_T0039719.1 MGP_NODShiLtJ_G0021360.1 mouse_genomes_project 14 68072745 68083045 + Gm21685 protein_coding processed_transcript MGP_NODShiLtJ_T0039721.1 MGP_NODShiLtJ_G0021360.1 mouse_genomes_project 14 68099085 68102787 + Gm21685 protein_coding retained_intron MGP_NODShiLtJ_T0098275.1 MGP_NODShiLtJ_G0036683.1 mouse_genomes_project 14 43117685 43121483 + Gm15562 sense_intronic sense_intronic MGP_NODShiLtJ_T0039843.1 MGP_NODShiLtJ_G0021398.1 mouse_genomes_project 14 72336391 72344994 + MGP_NODShiLtJ_P0039843 Med4 protein_coding protein_coding MGP_NODShiLtJ_T0003515.1 MGP_NODShiLtJ_G0003191.1 mouse_genomes_project 14 67993197 67996089 + Gm27222 antisense antisense MGP_NODShiLtJ_T0098852.1 MGP_NODShiLtJ_G0037246.1 mouse_genomes_project 14 59425597 59425701 - Gm25716 snRNA snRNA MGP_NODShiLtJ_T0017252.1 MGP_NODShiLtJ_G0015137.1 mouse_genomes_project 14 15702876 15706335 + A430057M04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017253.1 MGP_NODShiLtJ_G0015137.1 mouse_genomes_project 14 15703747 15712280 + A430057M04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0039208.1 MGP_NODShiLtJ_G0021175.1 mouse_genomes_project 14 52463745 52507353 + MGP_NODShiLtJ_P0039208 Thtpa protein_coding protein_coding MGP_NODShiLtJ_T0039209.1 MGP_NODShiLtJ_G0021175.1 mouse_genomes_project 14 52464818 52507740 + Thtpa protein_coding processed_transcript MGP_NODShiLtJ_T0039210.1 MGP_NODShiLtJ_G0021175.1 mouse_genomes_project 14 52465354 52508814 + MGP_NODShiLtJ_P0039210 Thtpa protein_coding protein_coding MGP_NODShiLtJ_T0039215.1 MGP_NODShiLtJ_G0021175.1 mouse_genomes_project 14 52504611 52508814 + MGP_NODShiLtJ_P0039215 Thtpa protein_coding protein_coding MGP_NODShiLtJ_T0098830.1 MGP_NODShiLtJ_G0037224.1 mouse_genomes_project 14 11833347 11833503 + Gm22350 snRNA snRNA MGP_NODShiLtJ_T0098850.1 MGP_NODShiLtJ_G0037244.1 mouse_genomes_project 14 54475516 54475575 - Gm22218 snRNA snRNA MGP_NODShiLtJ_T0002676.1 MGP_NODShiLtJ_G0002549.1 mouse_genomes_project 14 50827575 50827845 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0039449.1 MGP_NODShiLtJ_G0021252.1 mouse_genomes_project 14 55540464 55561342 - MGP_NODShiLtJ_P0039449 Ska3 protein_coding protein_coding MGP_NODShiLtJ_T0000895.1 MGP_NODShiLtJ_G0000824.1 mouse_genomes_project 14 59813179 59817668 - TEC TEC MGP_NODShiLtJ_T0009898.1 MGP_NODShiLtJ_G0008031.1 mouse_genomes_project 14 52352421 52352504 - Mir208a miRNA miRNA MGP_NODShiLtJ_T0038175.1 MGP_NODShiLtJ_G0020883.1 mouse_genomes_project 14 14699012 14812757 + MGP_NODShiLtJ_P0038175 Vcl protein_coding protein_coding MGP_NODShiLtJ_T0038440.1 MGP_NODShiLtJ_G0020948.1 mouse_genomes_project 14 25351585 25353369 - MGP_NODShiLtJ_P0038440 Spcs1 protein_coding protein_coding MGP_NODShiLtJ_T0038441.1 MGP_NODShiLtJ_G0020948.1 mouse_genomes_project 14 25351585 25353432 - MGP_NODShiLtJ_P0038441 Spcs1 protein_coding protein_coding MGP_NODShiLtJ_T0038442.1 MGP_NODShiLtJ_G0020948.1 mouse_genomes_project 14 25351586 25353426 - MGP_NODShiLtJ_P0038442 Spcs1 protein_coding protein_coding MGP_NODShiLtJ_T0038443.1 MGP_NODShiLtJ_G0020948.1 mouse_genomes_project 14 25351586 25353123 - MGP_NODShiLtJ_P0038443 Spcs1 protein_coding protein_coding MGP_NODShiLtJ_T0038444.1 MGP_NODShiLtJ_G0020948.1 mouse_genomes_project 14 25351587 25353129 - Spcs1 protein_coding retained_intron MGP_NODShiLtJ_T0038445.1 MGP_NODShiLtJ_G0020948.1 mouse_genomes_project 14 25351976 25353110 - Spcs1 protein_coding retained_intron MGP_NODShiLtJ_T0038446.1 MGP_NODShiLtJ_G0020948.1 mouse_genomes_project 14 25352155 25353127 - MGP_NODShiLtJ_P0038446 Spcs1 protein_coding protein_coding MGP_NODShiLtJ_T0039941.1 MGP_NODShiLtJ_G0021436.1 mouse_genomes_project 14 78903215 78907276 + MGP_NODShiLtJ_P0039941 Kbtbd6 protein_coding protein_coding MGP_NODShiLtJ_T0039488.1 MGP_NODShiLtJ_G0021266.1 mouse_genomes_project 14 57625872 57632250 + MGP_NODShiLtJ_P0039488 Shisa2 protein_coding protein_coding MGP_NODShiLtJ_T0038899.1 MGP_NODShiLtJ_G0021081.1 mouse_genomes_project 14 46963617 46969446 + MGP_NODShiLtJ_P0038899 Tlr11 protein_coding protein_coding MGP_NODShiLtJ_T0038900.1 MGP_NODShiLtJ_G0021081.1 mouse_genomes_project 14 46966284 46969277 + MGP_NODShiLtJ_P0038900 Tlr11 protein_coding protein_coding MGP_NODShiLtJ_T0006654.1 MGP_NODShiLtJ_G0005492.1 mouse_genomes_project 14 62938534 62939303 + Mir124a-1hg lincRNA lincRNA MGP_NODShiLtJ_T0006655.1 MGP_NODShiLtJ_G0005492.1 mouse_genomes_project 14 62939241 62947443 + Mir124a-1hg lincRNA lincRNA MGP_NODShiLtJ_T0006656.1 MGP_NODShiLtJ_G0005492.1 mouse_genomes_project 14 62941393 62943329 + Mir124a-1hg lincRNA lincRNA MGP_NODShiLtJ_T0006657.1 MGP_NODShiLtJ_G0005492.1 mouse_genomes_project 14 62942547 62943544 + Mir124a-1hg lincRNA lincRNA MGP_NODShiLtJ_T0038655.1 MGP_NODShiLtJ_G0020999.1 mouse_genomes_project 14 28623528 28650696 + MGP_NODShiLtJ_P0038655 Antxrl protein_coding protein_coding MGP_NODShiLtJ_T0038474.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25518617 25520471 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0038475.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25518617 25522437 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0038476.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25518617 25519453 - MGP_NODShiLtJ_P0038476 Stab1 protein_coding protein_coding MGP_NODShiLtJ_T0038477.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25518617 25548125 - MGP_NODShiLtJ_P0038477 Stab1 protein_coding protein_coding MGP_NODShiLtJ_T0038478.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25518621 25525058 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0038479.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25518621 25519779 - Stab1 protein_coding processed_transcript MGP_NODShiLtJ_T0038480.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25518623 25523330 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0038481.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25519573 25520548 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0038482.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25521237 25522797 - MGP_NODShiLtJ_P0038482 Stab1 protein_coding protein_coding MGP_NODShiLtJ_T0038483.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25521988 25522602 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0038484.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25536069 25536817 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0038485.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25536069 25541262 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0038486.1 MGP_NODShiLtJ_G0020954.1 mouse_genomes_project 14 25537942 25548079 - Stab1 protein_coding retained_intron MGP_NODShiLtJ_T0039294.1 MGP_NODShiLtJ_G0021191.1 mouse_genomes_project 14 53039391 53051320 + MGP_NODShiLtJ_P0039294 Rnf31 protein_coding protein_coding MGP_NODShiLtJ_T0039295.1 MGP_NODShiLtJ_G0021191.1 mouse_genomes_project 14 53039427 53045334 + MGP_NODShiLtJ_P0039295 Rnf31 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039296.1 MGP_NODShiLtJ_G0021191.1 mouse_genomes_project 14 53039958 53051291 + MGP_NODShiLtJ_P0039296 Rnf31 protein_coding protein_coding MGP_NODShiLtJ_T0039297.1 MGP_NODShiLtJ_G0021191.1 mouse_genomes_project 14 53040150 53040626 + Rnf31 protein_coding retained_intron MGP_NODShiLtJ_T0039298.1 MGP_NODShiLtJ_G0021191.1 mouse_genomes_project 14 53046038 53046604 + Rnf31 protein_coding retained_intron MGP_NODShiLtJ_T0012875.1 MGP_NODShiLtJ_G0010983.1 mouse_genomes_project 14 36401377 36402380 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039076.1 MGP_NODShiLtJ_G0021135.1 mouse_genomes_project 14 49387144 49388608 - MGP_NODShiLtJ_P0039076 protein_coding protein_coding MGP_NODShiLtJ_T0039463.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57105461 57129869 + MGP_NODShiLtJ_P0039463 Rcbtb1 protein_coding protein_coding MGP_NODShiLtJ_T0039464.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57105480 57144663 + MGP_NODShiLtJ_P0039464 Rcbtb1 protein_coding protein_coding MGP_NODShiLtJ_T0039465.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57105486 57142953 + MGP_NODShiLtJ_P0039465 Rcbtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039466.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57105494 57144663 + MGP_NODShiLtJ_P0039466 Rcbtb1 protein_coding protein_coding MGP_NODShiLtJ_T0039467.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57105728 57115475 + MGP_NODShiLtJ_P0039467 Rcbtb1 protein_coding protein_coding MGP_NODShiLtJ_T0039468.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57105735 57129181 + Rcbtb1 protein_coding processed_transcript MGP_NODShiLtJ_T0039469.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57105755 57115571 + MGP_NODShiLtJ_P0039469 Rcbtb1 protein_coding protein_coding MGP_NODShiLtJ_T0039470.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57111116 57137389 + MGP_NODShiLtJ_P0039470 Rcbtb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039471.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57123087 57132153 + Rcbtb1 protein_coding processed_transcript MGP_NODShiLtJ_T0039472.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57124259 57144657 + MGP_NODShiLtJ_P0039472 Rcbtb1 protein_coding protein_coding MGP_NODShiLtJ_T0039473.1 MGP_NODShiLtJ_G0021259.1 mouse_genomes_project 14 57129242 57132114 + Rcbtb1 protein_coding retained_intron MGP_NODShiLtJ_T0039543.1 MGP_NODShiLtJ_G0021289.1 mouse_genomes_project 14 60920394 61012194 - MGP_NODShiLtJ_P0039543 Ints6 protein_coding protein_coding MGP_NODShiLtJ_T0039544.1 MGP_NODShiLtJ_G0021289.1 mouse_genomes_project 14 60938652 61011740 - MGP_NODShiLtJ_P0039544 Ints6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039844.1 MGP_NODShiLtJ_G0021399.1 mouse_genomes_project 14 72388693 72392892 + Sucla2 protein_coding processed_transcript MGP_NODShiLtJ_T0039845.1 MGP_NODShiLtJ_G0021399.1 mouse_genomes_project 14 72388869 72431890 + MGP_NODShiLtJ_P0039845 Sucla2 protein_coding protein_coding MGP_NODShiLtJ_T0039846.1 MGP_NODShiLtJ_G0021399.1 mouse_genomes_project 14 72404498 72405088 + Sucla2 protein_coding retained_intron MGP_NODShiLtJ_T0039847.1 MGP_NODShiLtJ_G0021399.1 mouse_genomes_project 14 72426805 72427331 + Sucla2 protein_coding retained_intron MGP_NODShiLtJ_T0039848.1 MGP_NODShiLtJ_G0021399.1 mouse_genomes_project 14 72431847 72432608 + Sucla2 protein_coding processed_transcript MGP_NODShiLtJ_T0003503.1 MGP_NODShiLtJ_G0003181.1 mouse_genomes_project 14 54429117 54433289 + 2410022M11Rik antisense antisense MGP_NODShiLtJ_T0038818.1 MGP_NODShiLtJ_G0021058.1 mouse_genomes_project 14 43774369 43803825 - MGP_NODShiLtJ_P0038818 Atg14 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038819.1 MGP_NODShiLtJ_G0021058.1 mouse_genomes_project 14 43774379 43803853 - MGP_NODShiLtJ_P0038819 Atg14 protein_coding protein_coding MGP_NODShiLtJ_T0003480.1 MGP_NODShiLtJ_G0003162.1 mouse_genomes_project 14 25102473 25109763 - 1700087M22Rik antisense antisense MGP_NODShiLtJ_T0003474.1 MGP_NODShiLtJ_G0003157.1 mouse_genomes_project 14 17593759 17598107 + Gm29626 antisense antisense MGP_NODShiLtJ_T0003475.1 MGP_NODShiLtJ_G0003157.1 mouse_genomes_project 14 17593776 17598105 + Gm29626 antisense antisense MGP_NODShiLtJ_T0038057.1 MGP_NODShiLtJ_G0020843.1 mouse_genomes_project 14 7492952 7494637 - MGP_NODShiLtJ_P0038057 protein_coding protein_coding MGP_NODShiLtJ_T0038469.1 MGP_NODShiLtJ_G0020952.1 mouse_genomes_project 14 25462153 25505502 - MGP_NODShiLtJ_P0038469 Smim4 protein_coding protein_coding MGP_NODShiLtJ_T0038470.1 MGP_NODShiLtJ_G0020952.1 mouse_genomes_project 14 25462680 25505522 - MGP_NODShiLtJ_P0038470 Smim4 protein_coding protein_coding MGP_NODShiLtJ_T0038471.1 MGP_NODShiLtJ_G0020952.1 mouse_genomes_project 14 25500207 25505447 - MGP_NODShiLtJ_P0038471 Smim4 protein_coding protein_coding MGP_NODShiLtJ_T0038472.1 MGP_NODShiLtJ_G0020952.1 mouse_genomes_project 14 25500504 25505539 - MGP_NODShiLtJ_P0038472 Smim4 protein_coding protein_coding MGP_NODShiLtJ_T0039926.1 MGP_NODShiLtJ_G0021428.1 mouse_genomes_project 14 77791742 77840589 - MGP_NODShiLtJ_P0039926 Akap11 protein_coding protein_coding MGP_NODShiLtJ_T0039927.1 MGP_NODShiLtJ_G0021428.1 mouse_genomes_project 14 77791742 77840641 - MGP_NODShiLtJ_P0039927 Akap11 protein_coding protein_coding MGP_NODShiLtJ_T0039928.1 MGP_NODShiLtJ_G0021429.1 mouse_genomes_project 14 77874221 78072949 - MGP_NODShiLtJ_P0039928 Dgkh protein_coding protein_coding MGP_NODShiLtJ_T0100124.1 MGP_NODShiLtJ_G0038518.1 mouse_genomes_project 14 93352191 93352322 + Gm25495 snoRNA snoRNA MGP_NODShiLtJ_T0039809.1 MGP_NODShiLtJ_G0021393.1 mouse_genomes_project 14 71812724 71833659 - MGP_NODShiLtJ_P0039809 Cysltr2 protein_coding protein_coding MGP_NODShiLtJ_T0039810.1 MGP_NODShiLtJ_G0021393.1 mouse_genomes_project 14 71812724 71833659 - MGP_NODShiLtJ_P0039810 Cysltr2 protein_coding protein_coding MGP_NODShiLtJ_T0038685.1 MGP_NODShiLtJ_G0021013.1 mouse_genomes_project 14 29303917 29400549 + MGP_NODShiLtJ_P0038685 Wapl protein_coding protein_coding MGP_NODShiLtJ_T0038686.1 MGP_NODShiLtJ_G0021013.1 mouse_genomes_project 14 29303953 29398419 + MGP_NODShiLtJ_P0038686 Wapl protein_coding protein_coding MGP_NODShiLtJ_T0038687.1 MGP_NODShiLtJ_G0021013.1 mouse_genomes_project 14 29304111 29398514 + MGP_NODShiLtJ_P0038687 Wapl protein_coding protein_coding MGP_NODShiLtJ_T0038688.1 MGP_NODShiLtJ_G0021013.1 mouse_genomes_project 14 29325960 29398779 + Wapl protein_coding processed_transcript MGP_NODShiLtJ_T0038689.1 MGP_NODShiLtJ_G0021013.1 mouse_genomes_project 14 29367547 29398781 + MGP_NODShiLtJ_P0038689 Wapl protein_coding protein_coding MGP_NODShiLtJ_T0038690.1 MGP_NODShiLtJ_G0021013.1 mouse_genomes_project 14 29389393 29393674 + MGP_NODShiLtJ_P0038690 Wapl protein_coding protein_coding MGP_NODShiLtJ_T0039381.1 MGP_NODShiLtJ_G0021225.1 mouse_genomes_project 14 53686994 53712579 - MGP_NODShiLtJ_P0039381 Gzmn protein_coding protein_coding MGP_NODShiLtJ_T0040058.1 MGP_NODShiLtJ_G0021476.1 mouse_genomes_project 14 113271988 113276872 - MGP_NODShiLtJ_P0040058 Spry2 protein_coding protein_coding MGP_NODShiLtJ_T0002592.1 MGP_NODShiLtJ_G0002482.1 mouse_genomes_project 14 50585610 50586202 + MGP_NODShiLtJ_P0002592 Trav7d-3 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0009889.1 MGP_NODShiLtJ_G0008022.1 mouse_genomes_project 14 24247236 24247301 + Mir6947 miRNA miRNA MGP_NODShiLtJ_T0038914.1 MGP_NODShiLtJ_G0021095.1 mouse_genomes_project 14 47490896 47517641 - MGP_NODShiLtJ_P0038914 Ttc5 protein_coding protein_coding MGP_NODShiLtJ_T0038357.1 MGP_NODShiLtJ_G0020922.1 mouse_genomes_project 14 21020883 21022881 + MGP_NODShiLtJ_P0038357 Hesx1 protein_coding protein_coding MGP_NODShiLtJ_T0002615.1 MGP_NODShiLtJ_G0002500.1 mouse_genomes_project 14 51196909 51197521 + MGP_NODShiLtJ_P0002615 Trdv1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002616.1 MGP_NODShiLtJ_G0002500.1 mouse_genomes_project 14 51196909 51197521 + MGP_NODShiLtJ_P0002616 Trdv1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039102.1 MGP_NODShiLtJ_G0021143.1 mouse_genomes_project 14 51693690 51699341 + Oxa1l protein_coding retained_intron MGP_NODShiLtJ_T0039103.1 MGP_NODShiLtJ_G0021143.1 mouse_genomes_project 14 51693690 51710164 + MGP_NODShiLtJ_P0039103 Oxa1l protein_coding protein_coding MGP_NODShiLtJ_T0039104.1 MGP_NODShiLtJ_G0021143.1 mouse_genomes_project 14 51693894 51707526 + Oxa1l protein_coding retained_intron MGP_NODShiLtJ_T0038651.1 MGP_NODShiLtJ_G0020995.1 mouse_genomes_project 14 28525060 28535175 + MGP_NODShiLtJ_P0038651 Rbp3 protein_coding protein_coding MGP_NODShiLtJ_T0039946.1 MGP_NODShiLtJ_G0021440.1 mouse_genomes_project 14 79116782 79141889 - MGP_NODShiLtJ_P0039946 Lect1 protein_coding protein_coding MGP_NODShiLtJ_T0039947.1 MGP_NODShiLtJ_G0021440.1 mouse_genomes_project 14 79116785 79141975 - MGP_NODShiLtJ_P0039947 Lect1 protein_coding protein_coding MGP_NODShiLtJ_T0039948.1 MGP_NODShiLtJ_G0021440.1 mouse_genomes_project 14 79116908 79121288 - Lect1 protein_coding retained_intron MGP_NODShiLtJ_T0039949.1 MGP_NODShiLtJ_G0021440.1 mouse_genomes_project 14 79120569 79125410 - Lect1 protein_coding processed_transcript MGP_NODShiLtJ_T0039950.1 MGP_NODShiLtJ_G0021440.1 mouse_genomes_project 14 79121079 79125558 - Lect1 protein_coding retained_intron MGP_NODShiLtJ_T0009931.1 MGP_NODShiLtJ_G0008064.1 mouse_genomes_project 14 126245086 126245173 + Mir19b-1 miRNA miRNA MGP_NODShiLtJ_T0039510.1 MGP_NODShiLtJ_G0021274.1 mouse_genomes_project 14 58843701 58965253 + MGP_NODShiLtJ_P0039510 Mipep protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038676.1 MGP_NODShiLtJ_G0021010.1 mouse_genomes_project 14 29128610 29139793 - MGP_NODShiLtJ_P0038676 9230112D13Rik protein_coding protein_coding MGP_NODShiLtJ_T0002531.1 MGP_NODShiLtJ_G0002432.1 mouse_genomes_project 14 51534489 51534523 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0012889.1 MGP_NODShiLtJ_G0010997.1 mouse_genomes_project 14 49694100 49694325 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002669.1 MGP_NODShiLtJ_G0002542.1 mouse_genomes_project 14 49652468 49652966 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0039523.1 MGP_NODShiLtJ_G0021279.1 mouse_genomes_project 14 59422396 59444547 - MGP_NODShiLtJ_P0039523 Ebpl protein_coding protein_coding MGP_NODShiLtJ_T0039890.1 MGP_NODShiLtJ_G0021415.1 mouse_genomes_project 14 75025991 75035699 + MGP_NODShiLtJ_P0039890 Kctd4 protein_coding protein_coding MGP_NODShiLtJ_T0038577.1 MGP_NODShiLtJ_G0020972.1 mouse_genomes_project 14 26613604 26629935 + MGP_NODShiLtJ_P0038577 Msmb protein_coding protein_coding MGP_NODShiLtJ_T0038578.1 MGP_NODShiLtJ_G0020972.1 mouse_genomes_project 14 26619165 26629935 + MGP_NODShiLtJ_P0038578 Msmb protein_coding protein_coding MGP_NODShiLtJ_T0038906.1 MGP_NODShiLtJ_G0021087.1 mouse_genomes_project 14 47120512 47121138 + MGP_NODShiLtJ_P0038906 protein_coding protein_coding MGP_NODShiLtJ_T0039793.1 MGP_NODShiLtJ_G0021390.1 mouse_genomes_project 14 69379175 69386729 + Dok2 protein_coding processed_transcript MGP_NODShiLtJ_T0039794.1 MGP_NODShiLtJ_G0021390.1 mouse_genomes_project 14 69379188 69385295 + Dok2 protein_coding processed_transcript MGP_NODShiLtJ_T0039795.1 MGP_NODShiLtJ_G0021390.1 mouse_genomes_project 14 69386428 69389169 + Dok2 protein_coding processed_transcript MGP_NODShiLtJ_T0039796.1 MGP_NODShiLtJ_G0021390.1 mouse_genomes_project 14 69387460 69391652 + MGP_NODShiLtJ_P0039796 Dok2 protein_coding protein_coding MGP_NODShiLtJ_T0039797.1 MGP_NODShiLtJ_G0021390.1 mouse_genomes_project 14 69389035 69390026 + Dok2 protein_coding retained_intron MGP_NODShiLtJ_T0039798.1 MGP_NODShiLtJ_G0021390.1 mouse_genomes_project 14 69389334 69390709 + Dok2 protein_coding processed_transcript MGP_NODShiLtJ_T0039799.1 MGP_NODShiLtJ_G0021390.1 mouse_genomes_project 14 69389519 69390718 + Dok2 protein_coding processed_transcript MGP_NODShiLtJ_T0039800.1 MGP_NODShiLtJ_G0021390.1 mouse_genomes_project 14 69389866 69390752 + Dok2 protein_coding retained_intron MGP_NODShiLtJ_T0038230.1 MGP_NODShiLtJ_G0020892.1 mouse_genomes_project 14 15841796 15848777 - MGP_NODShiLtJ_P0038230 Zfp503 protein_coding protein_coding MGP_NODShiLtJ_T0039720.1 MGP_NODShiLtJ_G0021361.1 mouse_genomes_project 14 68083067 68102310 + MGP_NODShiLtJ_P0039720 protein_coding protein_coding MGP_NODShiLtJ_T0038649.1 MGP_NODShiLtJ_G0020993.1 mouse_genomes_project 14 28494036 28506895 + MGP_NODShiLtJ_P0038649 Gdf10 protein_coding protein_coding MGP_NODShiLtJ_T0012909.1 MGP_NODShiLtJ_G0011017.1 mouse_genomes_project 14 73696847 73710606 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038237.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17303983 17844662 - MGP_NODShiLtJ_P0038237 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038238.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17303983 17844662 - MGP_NODShiLtJ_P0038238 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038239.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17313236 17844662 - MGP_NODShiLtJ_P0038239 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038240.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17313236 17844662 - MGP_NODShiLtJ_P0038240 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038241.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17313236 17844662 - MGP_NODShiLtJ_P0038241 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038242.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17313923 18052987 - MGP_NODShiLtJ_P0038242 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038243.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17313937 17686213 - MGP_NODShiLtJ_P0038243 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038244.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17313937 18053640 - MGP_NODShiLtJ_P0038244 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038245.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17313937 17844662 - MGP_NODShiLtJ_P0038245 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038246.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17315452 18052987 - MGP_NODShiLtJ_P0038246 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038247.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17315452 18052759 - MGP_NODShiLtJ_P0038247 Kcnma1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038248.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17315582 18052907 - MGP_NODShiLtJ_P0038248 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038249.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17326040 17844662 - MGP_NODShiLtJ_P0038249 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038250.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 17326040 17844662 - MGP_NODShiLtJ_P0038250 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0038251.1 MGP_NODShiLtJ_G0020894.1 mouse_genomes_project 14 18051440 18053080 - MGP_NODShiLtJ_P0038251 Kcnma1 protein_coding protein_coding MGP_NODShiLtJ_T0098834.1 MGP_NODShiLtJ_G0037228.1 mouse_genomes_project 14 21545201 21545310 + Gm22485 snRNA snRNA MGP_NODShiLtJ_T0038915.1 MGP_NODShiLtJ_G0021096.1 mouse_genomes_project 14 47521358 47527785 - MGP_NODShiLtJ_P0038915 Ccnb1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0012880.1 MGP_NODShiLtJ_G0010988.1 mouse_genomes_project 14 42108555 42109913 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039192.1 MGP_NODShiLtJ_G0021167.1 mouse_genomes_project 14 52302959 52309073 - MGP_NODShiLtJ_P0039192 Slc22a17 protein_coding protein_coding MGP_NODShiLtJ_T0038611.1 MGP_NODShiLtJ_G0020982.1 mouse_genomes_project 14 27089979 27141723 + MGP_NODShiLtJ_P0038611 Prrxl1 protein_coding protein_coding MGP_NODShiLtJ_T0038612.1 MGP_NODShiLtJ_G0020982.1 mouse_genomes_project 14 27089980 27120933 + MGP_NODShiLtJ_P0038612 Prrxl1 protein_coding protein_coding MGP_NODShiLtJ_T0038613.1 MGP_NODShiLtJ_G0020982.1 mouse_genomes_project 14 27090113 27120909 + MGP_NODShiLtJ_P0038613 Prrxl1 protein_coding protein_coding MGP_NODShiLtJ_T0038614.1 MGP_NODShiLtJ_G0020982.1 mouse_genomes_project 14 27090439 27141765 + MGP_NODShiLtJ_P0038614 Prrxl1 protein_coding protein_coding MGP_NODShiLtJ_T0038451.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384159 25497298 + MGP_NODShiLtJ_P0038451 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038452.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384159 25493217 + MGP_NODShiLtJ_P0038452 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038453.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384170 25394120 + MGP_NODShiLtJ_P0038453 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038454.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384178 25456620 + MGP_NODShiLtJ_P0038454 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038455.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384191 25493283 + MGP_NODShiLtJ_P0038455 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038456.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384198 25394088 + MGP_NODShiLtJ_P0038456 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038457.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384220 25399817 + Pbrm1 protein_coding processed_transcript MGP_NODShiLtJ_T0038458.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384229 25493435 + MGP_NODShiLtJ_P0038458 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038459.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25384283 25493217 + MGP_NODShiLtJ_P0038459 Pbrm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038460.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25392096 25493282 + MGP_NODShiLtJ_P0038460 Pbrm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038461.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25392096 25488261 + MGP_NODShiLtJ_P0038461 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038462.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25392099 25495724 + MGP_NODShiLtJ_P0038462 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038463.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25392099 25493264 + MGP_NODShiLtJ_P0038463 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038464.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25392099 25493263 + MGP_NODShiLtJ_P0038464 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038465.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25392099 25493283 + MGP_NODShiLtJ_P0038465 Pbrm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038466.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25392100 25495747 + MGP_NODShiLtJ_P0038466 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038467.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25394067 25459066 + MGP_NODShiLtJ_P0038467 Pbrm1 protein_coding protein_coding MGP_NODShiLtJ_T0038468.1 MGP_NODShiLtJ_G0020951.1 mouse_genomes_project 14 25458225 25462062 + Pbrm1 protein_coding retained_intron MGP_NODShiLtJ_T0012871.1 MGP_NODShiLtJ_G0010979.1 mouse_genomes_project 14 26652417 26653858 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038784.1 MGP_NODShiLtJ_G0021049.1 mouse_genomes_project 14 42974988 42999753 + MGP_NODShiLtJ_P0038784 Cgrrf1 protein_coding protein_coding MGP_NODShiLtJ_T0038785.1 MGP_NODShiLtJ_G0021049.1 mouse_genomes_project 14 42975073 42983242 + Cgrrf1 protein_coding retained_intron MGP_NODShiLtJ_T0038786.1 MGP_NODShiLtJ_G0021049.1 mouse_genomes_project 14 42975083 42992033 + Cgrrf1 protein_coding retained_intron MGP_NODShiLtJ_T0038787.1 MGP_NODShiLtJ_G0021049.1 mouse_genomes_project 14 42975098 42993495 + Cgrrf1 protein_coding retained_intron MGP_NODShiLtJ_T0098854.1 MGP_NODShiLtJ_G0037248.1 mouse_genomes_project 14 69021234 69021336 - Gm24890 snRNA snRNA MGP_NODShiLtJ_T0002507.1 MGP_NODShiLtJ_G0002410.1 mouse_genomes_project 14 51545694 51545757 + MGP_NODShiLtJ_P0002507 Traj4 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038605.1 MGP_NODShiLtJ_G0020977.1 mouse_genomes_project 14 26807864 26835492 + MGP_NODShiLtJ_P0038605 Ogdhl protein_coding protein_coding MGP_NODShiLtJ_T0038606.1 MGP_NODShiLtJ_G0020977.1 mouse_genomes_project 14 26808298 26835812 + MGP_NODShiLtJ_P0038606 Ogdhl protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039078.1 MGP_NODShiLtJ_G0021137.1 mouse_genomes_project 14 49468272 49487039 + MGP_NODShiLtJ_P0039078 Olfr1509 protein_coding protein_coding MGP_NODShiLtJ_T0039079.1 MGP_NODShiLtJ_G0021137.1 mouse_genomes_project 14 49468273 49486428 + MGP_NODShiLtJ_P0039079 Olfr1509 protein_coding protein_coding MGP_NODShiLtJ_T0039080.1 MGP_NODShiLtJ_G0021137.1 mouse_genomes_project 14 49468308 49486262 + MGP_NODShiLtJ_P0039080 Olfr1509 protein_coding protein_coding MGP_NODShiLtJ_T0039081.1 MGP_NODShiLtJ_G0021137.1 mouse_genomes_project 14 49480452 49486521 + MGP_NODShiLtJ_P0039081 Olfr1509 protein_coding protein_coding MGP_NODShiLtJ_T0039082.1 MGP_NODShiLtJ_G0021137.1 mouse_genomes_project 14 49486029 49487039 + MGP_NODShiLtJ_P0039082 Olfr1509 protein_coding protein_coding MGP_NODShiLtJ_T0039385.1 MGP_NODShiLtJ_G0021229.1 mouse_genomes_project 14 53931680 53960848 + MGP_NODShiLtJ_P0039385 Atp12a protein_coding protein_coding MGP_NODShiLtJ_T0038693.1 MGP_NODShiLtJ_G0021015.1 mouse_genomes_project 14 30566907 30569344 - MGP_NODShiLtJ_P0038693 4930596D02Rik protein_coding protein_coding MGP_NODShiLtJ_T0017292.1 MGP_NODShiLtJ_G0015156.1 mouse_genomes_project 14 134734774 134738036 - 2610035F20Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017293.1 MGP_NODShiLtJ_G0015156.1 mouse_genomes_project 14 134734867 134740590 - 2610035F20Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0038405.1 MGP_NODShiLtJ_G0020940.1 mouse_genomes_project 14 24977940 25016403 + MGP_NODShiLtJ_P0038405 Rft1 protein_coding protein_coding MGP_NODShiLtJ_T0038406.1 MGP_NODShiLtJ_G0020940.1 mouse_genomes_project 14 24977955 24984940 + Rft1 protein_coding processed_transcript MGP_NODShiLtJ_T0038407.1 MGP_NODShiLtJ_G0020940.1 mouse_genomes_project 14 24977963 24987201 + Rft1 protein_coding processed_transcript MGP_NODShiLtJ_T0038408.1 MGP_NODShiLtJ_G0020940.1 mouse_genomes_project 14 24977967 24988384 + Rft1 protein_coding retained_intron MGP_NODShiLtJ_T0038409.1 MGP_NODShiLtJ_G0020940.1 mouse_genomes_project 14 24977987 25016403 + MGP_NODShiLtJ_P0038409 Rft1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038410.1 MGP_NODShiLtJ_G0020940.1 mouse_genomes_project 14 24977987 25016403 + MGP_NODShiLtJ_P0038410 Rft1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038411.1 MGP_NODShiLtJ_G0020940.1 mouse_genomes_project 14 25006119 25015040 + Rft1 protein_coding processed_transcript MGP_NODShiLtJ_T0006621.1 MGP_NODShiLtJ_G0005466.1 mouse_genomes_project 14 41714077 41715952 - A530076I17Rik lincRNA lincRNA MGP_NODShiLtJ_T0039343.1 MGP_NODShiLtJ_G0021201.1 mouse_genomes_project 14 53154839 53168641 - MGP_NODShiLtJ_P0039343 Tgm1 protein_coding protein_coding MGP_NODShiLtJ_T0039344.1 MGP_NODShiLtJ_G0021201.1 mouse_genomes_project 14 53154839 53168641 - MGP_NODShiLtJ_P0039344 Tgm1 protein_coding protein_coding MGP_NODShiLtJ_T0039345.1 MGP_NODShiLtJ_G0021201.1 mouse_genomes_project 14 53154839 53168237 - MGP_NODShiLtJ_P0039345 Tgm1 protein_coding protein_coding MGP_NODShiLtJ_T0039185.1 MGP_NODShiLtJ_G0021166.1 mouse_genomes_project 14 52287165 52293388 + MGP_NODShiLtJ_P0039185 Pabpn1 protein_coding protein_coding MGP_NODShiLtJ_T0039186.1 MGP_NODShiLtJ_G0021166.1 mouse_genomes_project 14 52290352 52294377 + MGP_NODShiLtJ_P0039186 Pabpn1 protein_coding protein_coding MGP_NODShiLtJ_T0039187.1 MGP_NODShiLtJ_G0021166.1 mouse_genomes_project 14 52290359 52294303 + MGP_NODShiLtJ_P0039187 Pabpn1 protein_coding protein_coding MGP_NODShiLtJ_T0039188.1 MGP_NODShiLtJ_G0021166.1 mouse_genomes_project 14 52290360 52294263 + MGP_NODShiLtJ_P0039188 Pabpn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039189.1 MGP_NODShiLtJ_G0021166.1 mouse_genomes_project 14 52290360 52295136 + MGP_NODShiLtJ_P0039189 Pabpn1 protein_coding protein_coding MGP_NODShiLtJ_T0039190.1 MGP_NODShiLtJ_G0021166.1 mouse_genomes_project 14 52290822 52294341 + MGP_NODShiLtJ_P0039190 Pabpn1 protein_coding protein_coding MGP_NODShiLtJ_T0039191.1 MGP_NODShiLtJ_G0021166.1 mouse_genomes_project 14 52291037 52292096 + MGP_NODShiLtJ_P0039191 Pabpn1 protein_coding protein_coding MGP_NODShiLtJ_T0038885.1 MGP_NODShiLtJ_G0021070.1 mouse_genomes_project 14 46439916 46440922 - MGP_NODShiLtJ_P0038885 Olfr724 protein_coding protein_coding MGP_NODShiLtJ_T0038886.1 MGP_NODShiLtJ_G0021070.1 mouse_genomes_project 14 46439916 46445442 - MGP_NODShiLtJ_P0038886 Olfr724 protein_coding protein_coding MGP_NODShiLtJ_T0039785.1 MGP_NODShiLtJ_G0021386.1 mouse_genomes_project 14 69199751 69232731 - MGP_NODShiLtJ_P0039785 Dmtn protein_coding protein_coding MGP_NODShiLtJ_T0039786.1 MGP_NODShiLtJ_G0021386.1 mouse_genomes_project 14 69199752 69229642 - MGP_NODShiLtJ_P0039786 Dmtn protein_coding protein_coding MGP_NODShiLtJ_T0039787.1 MGP_NODShiLtJ_G0021386.1 mouse_genomes_project 14 69199752 69240341 - MGP_NODShiLtJ_P0039787 Dmtn protein_coding protein_coding MGP_NODShiLtJ_T0039788.1 MGP_NODShiLtJ_G0021386.1 mouse_genomes_project 14 69202308 69231568 - MGP_NODShiLtJ_P0039788 Dmtn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0002493.1 MGP_NODShiLtJ_G0002396.1 mouse_genomes_project 14 51528185 51528242 + MGP_NODShiLtJ_P0002493 Traj21 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038901.1 MGP_NODShiLtJ_G0021082.1 mouse_genomes_project 14 47011627 47012566 + MGP_NODShiLtJ_P0038901 Olfr736 protein_coding protein_coding MGP_NODShiLtJ_T0039406.1 MGP_NODShiLtJ_G0021239.1 mouse_genomes_project 14 54647981 54652479 + MGP_NODShiLtJ_P0039406 protein_coding protein_coding MGP_NODShiLtJ_T0009915.1 MGP_NODShiLtJ_G0008048.1 mouse_genomes_project 14 69036362 69036444 + Mir320 miRNA miRNA MGP_NODShiLtJ_T0012927.1 MGP_NODShiLtJ_G0011035.1 mouse_genomes_project 14 134723747 134728594 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017278.1 MGP_NODShiLtJ_G0015149.1 mouse_genomes_project 14 106884998 106921395 + 4930517O19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017279.1 MGP_NODShiLtJ_G0015149.1 mouse_genomes_project 14 106885045 106922330 + 4930517O19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017280.1 MGP_NODShiLtJ_G0015149.1 mouse_genomes_project 14 106885045 106920896 + 4930517O19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0039531.1 MGP_NODShiLtJ_G0021285.1 mouse_genomes_project 14 60502435 60566116 + MGP_NODShiLtJ_P0039531 Rnaseh2b protein_coding protein_coding MGP_NODShiLtJ_T0039532.1 MGP_NODShiLtJ_G0021285.1 mouse_genomes_project 14 60543555 60585149 + MGP_NODShiLtJ_P0039532 Rnaseh2b protein_coding protein_coding MGP_NODShiLtJ_T0039533.1 MGP_NODShiLtJ_G0021285.1 mouse_genomes_project 14 60543612 60576373 + MGP_NODShiLtJ_P0039533 Rnaseh2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039534.1 MGP_NODShiLtJ_G0021285.1 mouse_genomes_project 14 60559795 60567885 + Rnaseh2b protein_coding retained_intron MGP_NODShiLtJ_T0012863.1 MGP_NODShiLtJ_G0010971.1 mouse_genomes_project 14 20097044 20098233 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038887.1 MGP_NODShiLtJ_G0021071.1 mouse_genomes_project 14 46573439 46574523 - MGP_NODShiLtJ_P0038887 protein_coding protein_coding MGP_NODShiLtJ_T0100086.1 MGP_NODShiLtJ_G0038480.1 mouse_genomes_project 14 4047692 4047824 + Gm25466 snoRNA snoRNA MGP_NODShiLtJ_T0009897.1 MGP_NODShiLtJ_G0008030.1 mouse_genomes_project 14 52003402 52003464 - Mir6948 miRNA miRNA MGP_NODShiLtJ_T0009914.1 MGP_NODShiLtJ_G0008047.1 mouse_genomes_project 14 68882785 68882871 - Gm44340 miRNA miRNA MGP_NODShiLtJ_T0098865.1 MGP_NODShiLtJ_G0037259.1 mouse_genomes_project 14 106400762 106400948 - Gm22970 snRNA snRNA MGP_NODShiLtJ_T0002679.1 MGP_NODShiLtJ_G0002552.1 mouse_genomes_project 14 51160088 51160640 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0009894.1 MGP_NODShiLtJ_G0008027.1 mouse_genomes_project 14 43111233 43111332 - Mir378c miRNA miRNA MGP_NODShiLtJ_T0039549.1 MGP_NODShiLtJ_G0021294.1 mouse_genomes_project 14 61325314 61329070 - MGP_NODShiLtJ_P0039549 Defb30 protein_coding protein_coding MGP_NODShiLtJ_T0039550.1 MGP_NODShiLtJ_G0021294.1 mouse_genomes_project 14 61325714 61341156 - MGP_NODShiLtJ_P0039550 Defb30 protein_coding protein_coding MGP_NODShiLtJ_T0039551.1 MGP_NODShiLtJ_G0021294.1 mouse_genomes_project 14 61327038 61341161 - MGP_NODShiLtJ_P0039551 Defb30 protein_coding protein_coding MGP_NODShiLtJ_T0039552.1 MGP_NODShiLtJ_G0021294.1 mouse_genomes_project 14 61327124 61329083 - MGP_NODShiLtJ_P0039552 Defb30 protein_coding protein_coding MGP_NODShiLtJ_T0038389.1 MGP_NODShiLtJ_G0020938.1 mouse_genomes_project 14 24856152 24856930 + Tkt protein_coding processed_transcript MGP_NODShiLtJ_T0038390.1 MGP_NODShiLtJ_G0020938.1 mouse_genomes_project 14 24856924 24883476 + MGP_NODShiLtJ_P0038390 Tkt protein_coding protein_coding MGP_NODShiLtJ_T0038391.1 MGP_NODShiLtJ_G0020938.1 mouse_genomes_project 14 24856974 24871351 + Tkt protein_coding retained_intron MGP_NODShiLtJ_T0038392.1 MGP_NODShiLtJ_G0020938.1 mouse_genomes_project 14 24857004 24869555 + MGP_NODShiLtJ_P0038392 Tkt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038393.1 MGP_NODShiLtJ_G0020938.1 mouse_genomes_project 14 24878245 24879561 + Tkt protein_coding retained_intron MGP_NODShiLtJ_T0038353.1 MGP_NODShiLtJ_G0020921.1 mouse_genomes_project 14 20916013 20988188 - MGP_NODShiLtJ_P0038353 Appl1 protein_coding protein_coding MGP_NODShiLtJ_T0038354.1 MGP_NODShiLtJ_G0020921.1 mouse_genomes_project 14 20950270 20973142 - Appl1 protein_coding retained_intron MGP_NODShiLtJ_T0038355.1 MGP_NODShiLtJ_G0020921.1 mouse_genomes_project 14 20951567 20987455 - Appl1 protein_coding retained_intron MGP_NODShiLtJ_T0038356.1 MGP_NODShiLtJ_G0020921.1 mouse_genomes_project 14 20979642 20987418 - Appl1 protein_coding retained_intron MGP_NODShiLtJ_T0039410.1 MGP_NODShiLtJ_G0021243.1 mouse_genomes_project 14 54779677 54784409 - MGP_NODShiLtJ_P0039410 Gm4491 protein_coding protein_coding MGP_NODShiLtJ_T0038913.1 MGP_NODShiLtJ_G0021094.1 mouse_genomes_project 14 47367434 47459281 - MGP_NODShiLtJ_P0038913 protein_coding protein_coding MGP_NODShiLtJ_T0039094.1 MGP_NODShiLtJ_G0021141.1 mouse_genomes_project 14 51584806 51599757 + MGP_NODShiLtJ_P0039094 Abhd4 protein_coding protein_coding MGP_NODShiLtJ_T0039095.1 MGP_NODShiLtJ_G0021141.1 mouse_genomes_project 14 51584850 51599663 + MGP_NODShiLtJ_P0039095 Abhd4 protein_coding protein_coding MGP_NODShiLtJ_T0039096.1 MGP_NODShiLtJ_G0021141.1 mouse_genomes_project 14 51589947 51593835 + Abhd4 protein_coding retained_intron MGP_NODShiLtJ_T0039097.1 MGP_NODShiLtJ_G0021141.1 mouse_genomes_project 14 51589953 51593994 + MGP_NODShiLtJ_P0039097 Abhd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039098.1 MGP_NODShiLtJ_G0021141.1 mouse_genomes_project 14 51589981 51593997 + MGP_NODShiLtJ_P0039098 Abhd4 protein_coding protein_coding MGP_NODShiLtJ_T0039099.1 MGP_NODShiLtJ_G0021141.1 mouse_genomes_project 14 51593649 51602812 + MGP_NODShiLtJ_P0039099 Abhd4 protein_coding protein_coding MGP_NODShiLtJ_T0039100.1 MGP_NODShiLtJ_G0021141.1 mouse_genomes_project 14 51593954 51598442 + MGP_NODShiLtJ_P0039100 Abhd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038802.1 MGP_NODShiLtJ_G0021053.1 mouse_genomes_project 14 43475305 43495021 + MGP_NODShiLtJ_P0038802 Socs4 protein_coding protein_coding MGP_NODShiLtJ_T0039790.1 MGP_NODShiLtJ_G0021388.1 mouse_genomes_project 14 69252972 69258915 - MGP_NODShiLtJ_P0039790 Npm2 protein_coding protein_coding MGP_NODShiLtJ_T0040084.1 MGP_NODShiLtJ_G0021492.1 mouse_genomes_project 14 130707200 130755536 - MGP_NODShiLtJ_P0040084 Dzip1 protein_coding protein_coding MGP_NODShiLtJ_T0040085.1 MGP_NODShiLtJ_G0021492.1 mouse_genomes_project 14 130707788 130757684 - MGP_NODShiLtJ_P0040085 Dzip1 protein_coding protein_coding MGP_NODShiLtJ_T0038309.1 MGP_NODShiLtJ_G0020912.1 mouse_genomes_project 14 20142438 20152328 + MGP_NODShiLtJ_P0038309 Duxbl3 protein_coding protein_coding MGP_NODShiLtJ_T0038310.1 MGP_NODShiLtJ_G0020912.1 mouse_genomes_project 14 20142756 20152519 + MGP_NODShiLtJ_P0038310 Duxbl3 protein_coding protein_coding MGP_NODShiLtJ_T0038312.1 MGP_NODShiLtJ_G0020912.1 mouse_genomes_project 14 20143394 20150427 + MGP_NODShiLtJ_P0038312 Duxbl3 protein_coding protein_coding MGP_NODShiLtJ_T0038314.1 MGP_NODShiLtJ_G0020912.1 mouse_genomes_project 14 20143728 20151165 + Duxbl3 protein_coding processed_transcript MGP_NODShiLtJ_T0038317.1 MGP_NODShiLtJ_G0020912.1 mouse_genomes_project 14 20146638 20153698 + MGP_NODShiLtJ_P0038317 Duxbl3 protein_coding protein_coding MGP_NODShiLtJ_T0002525.1 MGP_NODShiLtJ_G0002426.1 mouse_genomes_project 14 51482957 51483028 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0040129.1 MGP_NODShiLtJ_G0021512.1 mouse_genomes_project 14 134742086 134746541 + MGP_NODShiLtJ_P0040129 Zic2 protein_coding protein_coding MGP_NODShiLtJ_T0040130.1 MGP_NODShiLtJ_G0021512.1 mouse_genomes_project 14 134744751 134745702 + Zic2 protein_coding retained_intron MGP_NODShiLtJ_T0037999.1 MGP_NODShiLtJ_G0020823.1 mouse_genomes_project 14 578540 613095 - MGP_NODShiLtJ_P0037999 Acox2 protein_coding protein_coding MGP_NODShiLtJ_T0038000.1 MGP_NODShiLtJ_G0020823.1 mouse_genomes_project 14 578540 613616 - MGP_NODShiLtJ_P0038000 Acox2 protein_coding protein_coding MGP_NODShiLtJ_T0038001.1 MGP_NODShiLtJ_G0020823.1 mouse_genomes_project 14 592511 600666 - Acox2 protein_coding processed_transcript MGP_NODShiLtJ_T0038002.1 MGP_NODShiLtJ_G0020823.1 mouse_genomes_project 14 597790 600693 - Acox2 protein_coding retained_intron MGP_NODShiLtJ_T0038003.1 MGP_NODShiLtJ_G0020823.1 mouse_genomes_project 14 602138 607792 - Acox2 protein_coding retained_intron MGP_NODShiLtJ_T0038004.1 MGP_NODShiLtJ_G0020823.1 mouse_genomes_project 14 607811 612134 - MGP_NODShiLtJ_P0038004 Acox2 protein_coding protein_coding MGP_NODShiLtJ_T0038005.1 MGP_NODShiLtJ_G0020823.1 mouse_genomes_project 14 609456 612417 - Acox2 protein_coding processed_transcript MGP_NODShiLtJ_T0038006.1 MGP_NODShiLtJ_G0020823.1 mouse_genomes_project 14 610185 611197 - Acox2 protein_coding retained_intron MGP_NODShiLtJ_T0009934.1 MGP_NODShiLtJ_G0008067.1 mouse_genomes_project 14 130030976 130031079 + Mir6241 miRNA miRNA MGP_NODShiLtJ_T0039955.1 MGP_NODShiLtJ_G0021442.1 mouse_genomes_project 14 79345849 79351186 - MGP_NODShiLtJ_P0039955 Gm10845 protein_coding protein_coding MGP_NODShiLtJ_T0017261.1 MGP_NODShiLtJ_G0015141.1 mouse_genomes_project 14 64764345 64766139 - 1700001G11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017262.1 MGP_NODShiLtJ_G0015141.1 mouse_genomes_project 14 64764346 64765950 - 1700001G11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017263.1 MGP_NODShiLtJ_G0015141.1 mouse_genomes_project 14 64764506 64765893 - 1700001G11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0002487.1 MGP_NODShiLtJ_G0002390.1 mouse_genomes_project 14 51520801 51520860 + MGP_NODShiLtJ_P0002487 Traj27 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039140.1 MGP_NODShiLtJ_G0021155.1 mouse_genomes_project 14 51991638 52001650 - MGP_NODShiLtJ_P0039140 Cdh24 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038756.1 MGP_NODShiLtJ_G0021042.1 mouse_genomes_project 14 41483675 41561684 - MGP_NODShiLtJ_P0038756 Fermt2 protein_coding protein_coding MGP_NODShiLtJ_T0038757.1 MGP_NODShiLtJ_G0021042.1 mouse_genomes_project 14 41495311 41505348 - MGP_NODShiLtJ_P0038757 Fermt2 protein_coding protein_coding MGP_NODShiLtJ_T0038758.1 MGP_NODShiLtJ_G0021042.1 mouse_genomes_project 14 41503388 41561567 - MGP_NODShiLtJ_P0038758 Fermt2 protein_coding protein_coding MGP_NODShiLtJ_T0038759.1 MGP_NODShiLtJ_G0021042.1 mouse_genomes_project 14 41534357 41561389 - Fermt2 protein_coding processed_transcript MGP_NODShiLtJ_T0002506.1 MGP_NODShiLtJ_G0002409.1 mouse_genomes_project 14 51543157 51543219 + MGP_NODShiLtJ_P0002506 Traj5 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0098870.1 MGP_NODShiLtJ_G0037264.1 mouse_genomes_project 14 113680540 113680671 - Gm23459 snRNA snRNA MGP_NODShiLtJ_T0038362.1 MGP_NODShiLtJ_G0020926.1 mouse_genomes_project 14 21475791 21538485 + MGP_NODShiLtJ_P0038362 Fam208a protein_coding protein_coding MGP_NODShiLtJ_T0039983.1 MGP_NODShiLtJ_G0021454.1 mouse_genomes_project 14 105639153 105663584 - MGP_NODShiLtJ_P0039983 Dis3 protein_coding protein_coding MGP_NODShiLtJ_T0038656.1 MGP_NODShiLtJ_G0021000.1 mouse_genomes_project 14 28660677 28675264 + MGP_NODShiLtJ_P0038656 Anxa8 protein_coding protein_coding MGP_NODShiLtJ_T0038657.1 MGP_NODShiLtJ_G0021000.1 mouse_genomes_project 14 28660721 28674714 + MGP_NODShiLtJ_P0038657 Anxa8 protein_coding protein_coding MGP_NODShiLtJ_T0040119.1 MGP_NODShiLtJ_G0021505.1 mouse_genomes_project 14 134118563 134122894 - MGP_NODShiLtJ_P0040119 Gpr18 protein_coding protein_coding MGP_NODShiLtJ_T0039811.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71933060 71949595 + Rcbtb2 protein_coding retained_intron MGP_NODShiLtJ_T0039812.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71933060 71956662 + MGP_NODShiLtJ_P0039812 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039813.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71936877 71959051 + MGP_NODShiLtJ_P0039813 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039814.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71936899 71960818 + MGP_NODShiLtJ_P0039814 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039815.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937048 71949594 + Rcbtb2 protein_coding retained_intron MGP_NODShiLtJ_T0039816.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937064 71956713 + MGP_NODShiLtJ_P0039816 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039817.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937204 71994769 + MGP_NODShiLtJ_P0039817 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039818.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937333 71959115 + MGP_NODShiLtJ_P0039818 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039819.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937350 71958409 + Rcbtb2 protein_coding retained_intron MGP_NODShiLtJ_T0039820.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937358 71949165 + Rcbtb2 protein_coding retained_intron MGP_NODShiLtJ_T0039821.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937403 71978446 + MGP_NODShiLtJ_P0039821 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039822.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937417 71977474 + MGP_NODShiLtJ_P0039822 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039823.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937440 71978617 + MGP_NODShiLtJ_P0039823 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039824.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937444 71978372 + MGP_NODShiLtJ_P0039824 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039825.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937451 71949548 + Rcbtb2 protein_coding retained_intron MGP_NODShiLtJ_T0039826.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937451 71961151 + MGP_NODShiLtJ_P0039826 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039827.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937498 71959182 + MGP_NODShiLtJ_P0039827 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039828.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71937741 71956293 + MGP_NODShiLtJ_P0039828 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039829.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71956263 71976914 + MGP_NODShiLtJ_P0039829 Rcbtb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039830.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71956263 71976911 + MGP_NODShiLtJ_P0039830 Rcbtb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039831.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71968205 71976830 + MGP_NODShiLtJ_P0039831 Rcbtb2 protein_coding protein_coding MGP_NODShiLtJ_T0039832.1 MGP_NODShiLtJ_G0021394.1 mouse_genomes_project 14 71968766 71976994 + Rcbtb2 protein_coding retained_intron MGP_NODShiLtJ_T0039709.1 MGP_NODShiLtJ_G0021355.1 mouse_genomes_project 14 67917957 67921982 + MGP_NODShiLtJ_P0039709 Nkx3-1 protein_coding protein_coding MGP_NODShiLtJ_T0039961.1 MGP_NODShiLtJ_G0021446.1 mouse_genomes_project 14 89177853 89287542 + MGP_NODShiLtJ_P0039961 Tdrd3 protein_coding protein_coding MGP_NODShiLtJ_T0039962.1 MGP_NODShiLtJ_G0021446.1 mouse_genomes_project 14 89177853 89318333 + MGP_NODShiLtJ_P0039962 Tdrd3 protein_coding protein_coding MGP_NODShiLtJ_T0039963.1 MGP_NODShiLtJ_G0021446.1 mouse_genomes_project 14 89177880 89318346 + MGP_NODShiLtJ_P0039963 Tdrd3 protein_coding protein_coding MGP_NODShiLtJ_T0039964.1 MGP_NODShiLtJ_G0021446.1 mouse_genomes_project 14 89223001 89247135 + MGP_NODShiLtJ_P0039964 Tdrd3 protein_coding protein_coding MGP_NODShiLtJ_T0039965.1 MGP_NODShiLtJ_G0021446.1 mouse_genomes_project 14 89238544 89253265 + MGP_NODShiLtJ_P0039965 Tdrd3 protein_coding protein_coding MGP_NODShiLtJ_T0038732.1 MGP_NODShiLtJ_G0021030.1 mouse_genomes_project 14 36987409 37006826 + MGP_NODShiLtJ_P0038732 Mat1a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006597.1 MGP_NODShiLtJ_G0005450.1 mouse_genomes_project 14 14441857 14457581 - 6230400D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0098837.1 MGP_NODShiLtJ_G0037231.1 mouse_genomes_project 14 35710672 35710836 + Gm25012 snRNA snRNA MGP_NODShiLtJ_T0039123.1 MGP_NODShiLtJ_G0021147.1 mouse_genomes_project 14 51814224 51821565 + MGP_NODShiLtJ_P0039123 Lrp10 protein_coding protein_coding MGP_NODShiLtJ_T0009921.1 MGP_NODShiLtJ_G0008054.1 mouse_genomes_project 14 107424037 107425501 + miRNA miRNA MGP_NODShiLtJ_T0038531.1 MGP_NODShiLtJ_G0020963.1 mouse_genomes_project 14 25870214 25886825 - MGP_NODShiLtJ_P0038531 Mettl6 protein_coding protein_coding MGP_NODShiLtJ_T0100101.1 MGP_NODShiLtJ_G0038495.1 mouse_genomes_project 14 49044790 49044860 + Gm22354 snoRNA snoRNA MGP_NODShiLtJ_T0039483.1 MGP_NODShiLtJ_G0021264.1 mouse_genomes_project 14 57420725 57543734 + MGP_NODShiLtJ_P0039483 Cab39l protein_coding protein_coding MGP_NODShiLtJ_T0038909.1 MGP_NODShiLtJ_G0021090.1 mouse_genomes_project 14 47312794 47313967 + MGP_NODShiLtJ_P0038909 Olfr745 protein_coding protein_coding MGP_NODShiLtJ_T0037997.1 MGP_NODShiLtJ_G0020822.1 mouse_genomes_project 14 566269 576641 + MGP_NODShiLtJ_P0037997 Kctd6 protein_coding protein_coding MGP_NODShiLtJ_T0037998.1 MGP_NODShiLtJ_G0020822.1 mouse_genomes_project 14 566623 576635 + MGP_NODShiLtJ_P0037998 Kctd6 protein_coding protein_coding MGP_NODShiLtJ_T0098149.1 MGP_NODShiLtJ_G0036561.1 mouse_genomes_project 14 47543651 47543949 - Rpph1 ribozyme ribozyme MGP_NODShiLtJ_T0038013.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2065410 3017686 - MGP_NODShiLtJ_P0038013 Fhit protein_coding protein_coding MGP_NODShiLtJ_T0038014.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2065418 3850349 - MGP_NODShiLtJ_P0038014 Fhit protein_coding protein_coding MGP_NODShiLtJ_T0038015.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2065418 3850346 - MGP_NODShiLtJ_P0038015 Fhit protein_coding protein_coding MGP_NODShiLtJ_T0038016.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2065711 2403015 - MGP_NODShiLtJ_P0038016 Fhit protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038017.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2065711 2979723 - MGP_NODShiLtJ_P0038017 Fhit protein_coding protein_coding MGP_NODShiLtJ_T0038018.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2091528 3807985 - MGP_NODShiLtJ_P0038018 Fhit protein_coding protein_coding MGP_NODShiLtJ_T0038019.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2294916 3807572 - Fhit protein_coding retained_intron MGP_NODShiLtJ_T0038020.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2295023 3807956 - MGP_NODShiLtJ_P0038020 Fhit protein_coding protein_coding MGP_NODShiLtJ_T0038021.1 MGP_NODShiLtJ_G0020827.1 mouse_genomes_project 14 2400759 3850349 - MGP_NODShiLtJ_P0038021 Fhit protein_coding protein_coding MGP_NODShiLtJ_T0098843.1 MGP_NODShiLtJ_G0037237.1 mouse_genomes_project 14 45984526 45984667 - Gm22116 snRNA snRNA MGP_NODShiLtJ_T0000896.1 MGP_NODShiLtJ_G0000825.1 mouse_genomes_project 14 59819680 59821827 + TEC TEC MGP_NODShiLtJ_T0039740.1 MGP_NODShiLtJ_G0021371.1 mouse_genomes_project 14 68722419 68728716 - MGP_NODShiLtJ_P0039740 9930012K11Rik protein_coding protein_coding MGP_NODShiLtJ_T0039741.1 MGP_NODShiLtJ_G0021371.1 mouse_genomes_project 14 68722419 68728716 - MGP_NODShiLtJ_P0039741 9930012K11Rik protein_coding protein_coding MGP_NODShiLtJ_T0039742.1 MGP_NODShiLtJ_G0021371.1 mouse_genomes_project 14 68722422 68726132 - 9930012K11Rik protein_coding retained_intron MGP_NODShiLtJ_T0039743.1 MGP_NODShiLtJ_G0021371.1 mouse_genomes_project 14 68722912 68725681 - MGP_NODShiLtJ_P0039743 9930012K11Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039744.1 MGP_NODShiLtJ_G0021371.1 mouse_genomes_project 14 68723045 68726024 - 9930012K11Rik protein_coding retained_intron MGP_NODShiLtJ_T0038412.1 MGP_NODShiLtJ_G0020941.1 mouse_genomes_project 14 25041910 25150746 + MGP_NODShiLtJ_P0038412 Sfmbt1 protein_coding protein_coding MGP_NODShiLtJ_T0038413.1 MGP_NODShiLtJ_G0020941.1 mouse_genomes_project 14 25042228 25147867 + MGP_NODShiLtJ_P0038413 Sfmbt1 protein_coding protein_coding MGP_NODShiLtJ_T0038414.1 MGP_NODShiLtJ_G0020941.1 mouse_genomes_project 14 25042676 25155501 + MGP_NODShiLtJ_P0038414 Sfmbt1 protein_coding protein_coding MGP_NODShiLtJ_T0038415.1 MGP_NODShiLtJ_G0020941.1 mouse_genomes_project 14 25043558 25151129 + MGP_NODShiLtJ_P0038415 Sfmbt1 protein_coding protein_coding MGP_NODShiLtJ_T0038416.1 MGP_NODShiLtJ_G0020941.1 mouse_genomes_project 14 25105884 25151128 + MGP_NODShiLtJ_P0038416 Sfmbt1 protein_coding protein_coding MGP_NODShiLtJ_T0038417.1 MGP_NODShiLtJ_G0020941.1 mouse_genomes_project 14 25124296 25127408 + Sfmbt1 protein_coding retained_intron MGP_NODShiLtJ_T0038932.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47683151 47686768 - MGP_NODShiLtJ_P0038932 Tmem55b protein_coding protein_coding MGP_NODShiLtJ_T0038933.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47683156 47686795 - MGP_NODShiLtJ_P0038933 Tmem55b protein_coding protein_coding MGP_NODShiLtJ_T0038934.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47683158 47686790 - Tmem55b protein_coding retained_intron MGP_NODShiLtJ_T0038935.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47683807 47685151 - MGP_NODShiLtJ_P0038935 Tmem55b protein_coding protein_coding MGP_NODShiLtJ_T0038936.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47684767 47686742 - MGP_NODShiLtJ_P0038936 Tmem55b protein_coding protein_coding MGP_NODShiLtJ_T0038937.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47684863 47686772 - Tmem55b protein_coding retained_intron MGP_NODShiLtJ_T0038938.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47684965 47685705 - Tmem55b protein_coding retained_intron MGP_NODShiLtJ_T0038939.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47685199 47686777 - Tmem55b protein_coding retained_intron MGP_NODShiLtJ_T0038940.1 MGP_NODShiLtJ_G0021103.1 mouse_genomes_project 14 47685276 47686739 - Tmem55b protein_coding retained_intron MGP_NODShiLtJ_T0038515.1 MGP_NODShiLtJ_G0020959.1 mouse_genomes_project 14 25632870 25641361 + MGP_NODShiLtJ_P0038515 Bap1 protein_coding protein_coding MGP_NODShiLtJ_T0038516.1 MGP_NODShiLtJ_G0020959.1 mouse_genomes_project 14 25632923 25634435 + Bap1 protein_coding retained_intron MGP_NODShiLtJ_T0038517.1 MGP_NODShiLtJ_G0020959.1 mouse_genomes_project 14 25632931 25635622 + Bap1 protein_coding retained_intron MGP_NODShiLtJ_T0038518.1 MGP_NODShiLtJ_G0020959.1 mouse_genomes_project 14 25632958 25641347 + Bap1 protein_coding retained_intron MGP_NODShiLtJ_T0038519.1 MGP_NODShiLtJ_G0020959.1 mouse_genomes_project 14 25633000 25636558 + MGP_NODShiLtJ_P0038519 Bap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038520.1 MGP_NODShiLtJ_G0020959.1 mouse_genomes_project 14 25637685 25639941 + MGP_NODShiLtJ_P0038520 Bap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038521.1 MGP_NODShiLtJ_G0020959.1 mouse_genomes_project 14 25637955 25639058 + Bap1 protein_coding retained_intron MGP_NODShiLtJ_T0038522.1 MGP_NODShiLtJ_G0020959.1 mouse_genomes_project 14 25638907 25640305 + Bap1 protein_coding retained_intron MGP_NODShiLtJ_T0012868.1 MGP_NODShiLtJ_G0010976.1 mouse_genomes_project 14 20508732 20509355 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039530.1 MGP_NODShiLtJ_G0021284.1 mouse_genomes_project 14 60473941 60502826 - MGP_NODShiLtJ_P0039530 Dleu7 protein_coding protein_coding MGP_NODShiLtJ_T0039714.1 MGP_NODShiLtJ_G0021358.1 mouse_genomes_project 14 68024242 68029228 - MGP_NODShiLtJ_P0039714 protein_coding protein_coding MGP_NODShiLtJ_T0039940.1 MGP_NODShiLtJ_G0021435.1 mouse_genomes_project 14 78867677 78876743 + MGP_NODShiLtJ_P0039940 Kbtbd7 protein_coding protein_coding MGP_NODShiLtJ_T0098840.1 MGP_NODShiLtJ_G0037234.1 mouse_genomes_project 14 45050961 45051068 - Gm25380 snRNA snRNA MGP_NODShiLtJ_T0039105.1 MGP_NODShiLtJ_G0021144.1 mouse_genomes_project 14 51709926 51760886 - MGP_NODShiLtJ_P0039105 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039106.1 MGP_NODShiLtJ_G0021144.1 mouse_genomes_project 14 51713832 51724215 - protein_coding processed_transcript MGP_NODShiLtJ_T0039107.1 MGP_NODShiLtJ_G0021144.1 mouse_genomes_project 14 51714281 51738710 - protein_coding processed_transcript MGP_NODShiLtJ_T0039108.1 MGP_NODShiLtJ_G0021144.1 mouse_genomes_project 14 51719045 51754073 - MGP_NODShiLtJ_P0039108 protein_coding protein_coding MGP_NODShiLtJ_T0039109.1 MGP_NODShiLtJ_G0021144.1 mouse_genomes_project 14 51751390 51755641 - MGP_NODShiLtJ_P0039109 protein_coding protein_coding MGP_NODShiLtJ_T0039110.1 MGP_NODShiLtJ_G0021144.1 mouse_genomes_project 14 51751527 51761081 - MGP_NODShiLtJ_P0039110 protein_coding protein_coding MGP_NODShiLtJ_T0039733.1 MGP_NODShiLtJ_G0021364.1 mouse_genomes_project 14 68245323 68262132 - MGP_NODShiLtJ_P0039733 Chmp7 protein_coding protein_coding MGP_NODShiLtJ_T0012877.1 MGP_NODShiLtJ_G0010985.1 mouse_genomes_project 14 41206602 41207512 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040113.1 MGP_NODShiLtJ_G0021502.1 mouse_genomes_project 14 133600021 133658656 - MGP_NODShiLtJ_P0040113 Slc15a1 protein_coding protein_coding MGP_NODShiLtJ_T0039083.1 MGP_NODShiLtJ_G0021138.1 mouse_genomes_project 14 49504198 49508968 - MGP_NODShiLtJ_P0039083 Olfr1508 protein_coding protein_coding MGP_NODShiLtJ_T0039084.1 MGP_NODShiLtJ_G0021138.1 mouse_genomes_project 14 49504552 49509002 - MGP_NODShiLtJ_P0039084 Olfr1508 protein_coding protein_coding MGP_NODShiLtJ_T0039085.1 MGP_NODShiLtJ_G0021138.1 mouse_genomes_project 14 49505020 49508597 - MGP_NODShiLtJ_P0039085 Olfr1508 protein_coding protein_coding MGP_NODShiLtJ_T0039892.1 MGP_NODShiLtJ_G0021417.1 mouse_genomes_project 14 75194941 75221408 + MGP_NODShiLtJ_P0039892 Nufip1 protein_coding protein_coding MGP_NODShiLtJ_T0009919.1 MGP_NODShiLtJ_G0008052.1 mouse_genomes_project 14 79220634 79220732 + Mir759 miRNA miRNA MGP_NODShiLtJ_T0002530.1 MGP_NODShiLtJ_G0002431.1 mouse_genomes_project 14 51511031 51511097 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0040065.1 MGP_NODShiLtJ_G0021482.1 mouse_genomes_project 14 124053159 124056696 + MGP_NODShiLtJ_P0040065 protein_coding protein_coding MGP_NODShiLtJ_T0097937.1 MGP_NODShiLtJ_G0036349.1 mouse_genomes_project 14 31820886 31821102 - n-R5s46 rRNA rRNA MGP_NODShiLtJ_T0003482.1 MGP_NODShiLtJ_G0003164.1 mouse_genomes_project 14 27907926 27912125 - Gm15512 antisense antisense MGP_NODShiLtJ_T0003526.1 MGP_NODShiLtJ_G0003198.1 mouse_genomes_project 14 79253953 79256789 + Gm9748 antisense antisense MGP_NODShiLtJ_T0003527.1 MGP_NODShiLtJ_G0003198.1 mouse_genomes_project 14 79254027 79256737 + Gm9748 antisense antisense MGP_NODShiLtJ_T0038394.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24915188 24931777 - MGP_NODShiLtJ_P0038394 Prkcd protein_coding protein_coding MGP_NODShiLtJ_T0038395.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24915196 24948283 - MGP_NODShiLtJ_P0038395 Prkcd protein_coding protein_coding MGP_NODShiLtJ_T0038396.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24915198 24931777 - MGP_NODShiLtJ_P0038396 Prkcd protein_coding protein_coding MGP_NODShiLtJ_T0038397.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24915437 24929297 - MGP_NODShiLtJ_P0038397 Prkcd protein_coding protein_coding MGP_NODShiLtJ_T0038398.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24915496 24920046 - Prkcd protein_coding retained_intron MGP_NODShiLtJ_T0038399.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24918245 24929297 - MGP_NODShiLtJ_P0038399 Prkcd protein_coding protein_coding MGP_NODShiLtJ_T0038400.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24918245 24929297 - MGP_NODShiLtJ_P0038400 Prkcd protein_coding protein_coding MGP_NODShiLtJ_T0038401.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24920100 24948247 - Prkcd protein_coding retained_intron MGP_NODShiLtJ_T0038402.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24922238 24926272 - Prkcd protein_coding retained_intron MGP_NODShiLtJ_T0038403.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24922333 24926081 - Prkcd protein_coding retained_intron MGP_NODShiLtJ_T0038404.1 MGP_NODShiLtJ_G0020939.1 mouse_genomes_project 14 24924589 24928819 - Prkcd protein_coding retained_intron MGP_NODShiLtJ_T0002533.1 MGP_NODShiLtJ_G0002434.1 mouse_genomes_project 14 51548247 51548276 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0100117.1 MGP_NODShiLtJ_G0038511.1 mouse_genomes_project 14 69014483 69014593 - Gm22725 snoRNA snoRNA MGP_NODShiLtJ_T0038385.1 MGP_NODShiLtJ_G0020936.1 mouse_genomes_project 14 24299476 24633329 - MGP_NODShiLtJ_P0038385 Cacna1d protein_coding protein_coding MGP_NODShiLtJ_T0038386.1 MGP_NODShiLtJ_G0020936.1 mouse_genomes_project 14 24299476 24780932 - MGP_NODShiLtJ_P0038386 Cacna1d protein_coding protein_coding MGP_NODShiLtJ_T0038387.1 MGP_NODShiLtJ_G0020936.1 mouse_genomes_project 14 24322561 24490374 - MGP_NODShiLtJ_P0038387 Cacna1d protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098839.1 MGP_NODShiLtJ_G0037233.1 mouse_genomes_project 14 45003092 45003196 + Gm23469 snRNA snRNA MGP_NODShiLtJ_T0039986.1 MGP_NODShiLtJ_G0021457.1 mouse_genomes_project 14 106514861 106813948 - MGP_NODShiLtJ_P0039986 Klf12 protein_coding protein_coding MGP_NODShiLtJ_T0038260.1 MGP_NODShiLtJ_G0020896.1 mouse_genomes_project 14 18366906 18398151 + MGP_NODShiLtJ_P0038260 protein_coding protein_coding MGP_NODShiLtJ_T0038261.1 MGP_NODShiLtJ_G0020896.1 mouse_genomes_project 14 18366928 18386672 + MGP_NODShiLtJ_P0038261 protein_coding protein_coding MGP_NODShiLtJ_T0038262.1 MGP_NODShiLtJ_G0020896.1 mouse_genomes_project 14 18366976 18371977 + protein_coding retained_intron MGP_NODShiLtJ_T0038263.1 MGP_NODShiLtJ_G0020896.1 mouse_genomes_project 14 18367011 18398158 + MGP_NODShiLtJ_P0038263 protein_coding protein_coding MGP_NODShiLtJ_T0038264.1 MGP_NODShiLtJ_G0020896.1 mouse_genomes_project 14 18367024 18371746 + MGP_NODShiLtJ_P0038264 protein_coding protein_coding MGP_NODShiLtJ_T0038265.1 MGP_NODShiLtJ_G0020896.1 mouse_genomes_project 14 18367056 18398151 + MGP_NODShiLtJ_P0038265 protein_coding protein_coding MGP_NODShiLtJ_T0002565.1 MGP_NODShiLtJ_G0002459.1 mouse_genomes_project 14 49966609 49967247 + MGP_NODShiLtJ_P0002565 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039638.1 MGP_NODShiLtJ_G0021330.1 mouse_genomes_project 14 64467601 64527292 - MGP_NODShiLtJ_P0039638 Adam2 protein_coding protein_coding MGP_NODShiLtJ_T0009884.1 MGP_NODShiLtJ_G0008017.1 mouse_genomes_project 14 18147449 18147503 + Mir7210 miRNA miRNA MGP_NODShiLtJ_T0038282.1 MGP_NODShiLtJ_G0020902.1 mouse_genomes_project 14 19993046 20040697 + MGP_NODShiLtJ_P0038282 Anxa11 protein_coding protein_coding MGP_NODShiLtJ_T0038283.1 MGP_NODShiLtJ_G0020902.1 mouse_genomes_project 14 19993073 20033038 + Anxa11 protein_coding retained_intron MGP_NODShiLtJ_T0038284.1 MGP_NODShiLtJ_G0020902.1 mouse_genomes_project 14 19993073 20040697 + Anxa11 protein_coding retained_intron MGP_NODShiLtJ_T0038285.1 MGP_NODShiLtJ_G0020902.1 mouse_genomes_project 14 19993073 20033431 + MGP_NODShiLtJ_P0038285 Anxa11 protein_coding protein_coding MGP_NODShiLtJ_T0006589.1 MGP_NODShiLtJ_G0005446.1 mouse_genomes_project 14 1041170 1048075 + 4930455B14Rik lincRNA lincRNA MGP_NODShiLtJ_T0006590.1 MGP_NODShiLtJ_G0005446.1 mouse_genomes_project 14 1041170 1048133 + 4930455B14Rik lincRNA lincRNA MGP_NODShiLtJ_T0038615.1 MGP_NODShiLtJ_G0020983.1 mouse_genomes_project 14 27152931 27179718 - MGP_NODShiLtJ_P0038615 3425401B19Rik protein_coding protein_coding MGP_NODShiLtJ_T0002675.1 MGP_NODShiLtJ_G0002548.1 mouse_genomes_project 14 50644551 50645089 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0012925.1 MGP_NODShiLtJ_G0011033.1 mouse_genomes_project 14 124291715 124292157 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038334.1 MGP_NODShiLtJ_G0020915.1 mouse_genomes_project 14 20452981 20453338 + MGP_NODShiLtJ_P0038334 Gm2178 protein_coding protein_coding MGP_NODShiLtJ_T0097940.1 MGP_NODShiLtJ_G0036352.1 mouse_genomes_project 14 72827440 72827546 - Gm22164 rRNA rRNA MGP_NODShiLtJ_T0038670.1 MGP_NODShiLtJ_G0021007.1 mouse_genomes_project 14 28975301 28979810 - MGP_NODShiLtJ_P0038670 Sncg protein_coding protein_coding MGP_NODShiLtJ_T0100099.1 MGP_NODShiLtJ_G0038493.1 mouse_genomes_project 14 32215203 32215336 + Gm22469 snoRNA snoRNA MGP_NODShiLtJ_T0038473.1 MGP_NODShiLtJ_G0020953.1 mouse_genomes_project 14 25513137 25518726 + MGP_NODShiLtJ_P0038473 Nt5dc2 protein_coding protein_coding MGP_NODShiLtJ_T0039421.1 MGP_NODShiLtJ_G0021248.1 mouse_genomes_project 14 55257172 55284322 - MGP_NODShiLtJ_P0039421 Eef1akmt1 protein_coding protein_coding MGP_NODShiLtJ_T0002605.1 MGP_NODShiLtJ_G0002493.1 mouse_genomes_project 14 50963657 50964233 + MGP_NODShiLtJ_P0002605 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012867.1 MGP_NODShiLtJ_G0010975.1 mouse_genomes_project 14 20505245 20506043 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006663.1 MGP_NODShiLtJ_G0005497.1 mouse_genomes_project 14 74128882 74129521 - Gm15628 lincRNA lincRNA MGP_NODShiLtJ_T0006591.1 MGP_NODShiLtJ_G0005447.1 mouse_genomes_project 14 6043986 6198526 - lincRNA lincRNA MGP_NODShiLtJ_T0006592.1 MGP_NODShiLtJ_G0005447.1 mouse_genomes_project 14 6045172 6057838 - lincRNA lincRNA MGP_NODShiLtJ_T0006593.1 MGP_NODShiLtJ_G0005447.1 mouse_genomes_project 14 6175129 6198518 - lincRNA lincRNA MGP_NODShiLtJ_T0040108.1 MGP_NODShiLtJ_G0021500.1 mouse_genomes_project 14 133123952 133343591 + MGP_NODShiLtJ_P0040108 Farp1 protein_coding protein_coding MGP_NODShiLtJ_T0040109.1 MGP_NODShiLtJ_G0021500.1 mouse_genomes_project 14 133124316 133397163 + MGP_NODShiLtJ_P0040109 Farp1 protein_coding protein_coding MGP_NODShiLtJ_T0040110.1 MGP_NODShiLtJ_G0021500.1 mouse_genomes_project 14 133193851 133347113 + Farp1 protein_coding processed_transcript MGP_NODShiLtJ_T0040111.1 MGP_NODShiLtJ_G0021500.1 mouse_genomes_project 14 133367235 133381340 + Farp1 protein_coding retained_intron MGP_NODShiLtJ_T0100134.1 MGP_NODShiLtJ_G0038528.1 mouse_genomes_project 14 108119621 108119757 + Gm26173 snoRNA snoRNA MGP_NODShiLtJ_T0006639.1 MGP_NODShiLtJ_G0005479.1 mouse_genomes_project 14 51682260 51684434 - 5330426L24Rik lincRNA lincRNA MGP_NODShiLtJ_T0003529.1 MGP_NODShiLtJ_G0003200.1 mouse_genomes_project 14 134079190 134080789 - 1810041H14Rik antisense antisense MGP_NODShiLtJ_T0003530.1 MGP_NODShiLtJ_G0003200.1 mouse_genomes_project 14 134079276 134081023 - 1810041H14Rik antisense antisense MGP_NODShiLtJ_T0003531.1 MGP_NODShiLtJ_G0003200.1 mouse_genomes_project 14 134079324 134081928 - 1810041H14Rik antisense antisense MGP_NODShiLtJ_T0100085.1 MGP_NODShiLtJ_G0038479.1 mouse_genomes_project 14 3058950 3059150 + Gm22053 snoRNA snoRNA MGP_NODShiLtJ_T0002457.1 MGP_NODShiLtJ_G0002363.1 mouse_genomes_project 14 51485209 51485272 + MGP_NODShiLtJ_P0002457 Traj58 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038348.1 MGP_NODShiLtJ_G0020920.1 mouse_genomes_project 14 20891057 20912615 + MGP_NODShiLtJ_P0038348 Asb14 protein_coding protein_coding MGP_NODShiLtJ_T0038349.1 MGP_NODShiLtJ_G0020920.1 mouse_genomes_project 14 20891102 20911775 + MGP_NODShiLtJ_P0038349 Asb14 protein_coding protein_coding MGP_NODShiLtJ_T0038350.1 MGP_NODShiLtJ_G0020920.1 mouse_genomes_project 14 20891112 20897340 + Asb14 protein_coding processed_transcript MGP_NODShiLtJ_T0038351.1 MGP_NODShiLtJ_G0020920.1 mouse_genomes_project 14 20891120 20899540 + MGP_NODShiLtJ_P0038351 Asb14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038352.1 MGP_NODShiLtJ_G0020920.1 mouse_genomes_project 14 20899489 20912616 + MGP_NODShiLtJ_P0038352 Asb14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098866.1 MGP_NODShiLtJ_G0037260.1 mouse_genomes_project 14 107490088 107490189 - Gm23538 snRNA snRNA MGP_NODShiLtJ_T0039529.1 MGP_NODShiLtJ_G0021283.1 mouse_genomes_project 14 59718292 59722678 + MGP_NODShiLtJ_P0039529 Kcnrg protein_coding protein_coding MGP_NODShiLtJ_T0039930.1 MGP_NODShiLtJ_G0021431.1 mouse_genomes_project 14 78615954 78656904 - MGP_NODShiLtJ_P0039930 Zfp957 protein_coding protein_coding MGP_NODShiLtJ_T0039931.1 MGP_NODShiLtJ_G0021431.1 mouse_genomes_project 14 78615954 78633616 - MGP_NODShiLtJ_P0039931 Zfp957 protein_coding protein_coding MGP_NODShiLtJ_T0039932.1 MGP_NODShiLtJ_G0021431.1 mouse_genomes_project 14 78632669 78656977 - Zfp957 protein_coding retained_intron MGP_NODShiLtJ_T0012870.1 MGP_NODShiLtJ_G0010978.1 mouse_genomes_project 14 25134569 25135345 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039637.1 MGP_NODShiLtJ_G0021329.1 mouse_genomes_project 14 64417448 64443983 - MGP_NODShiLtJ_P0039637 Gulo protein_coding protein_coding MGP_NODShiLtJ_T0038487.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25550413 25586968 - MGP_NODShiLtJ_P0038487 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038488.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25550413 25571700 - MGP_NODShiLtJ_P0038488 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038489.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25550741 25567377 - MGP_NODShiLtJ_P0038489 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038490.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25550849 25553766 - MGP_NODShiLtJ_P0038490 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038491.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25551497 25553212 - MGP_NODShiLtJ_P0038491 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038492.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25553910 25556054 - MGP_NODShiLtJ_P0038492 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038493.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25556361 25583557 - MGP_NODShiLtJ_P0038493 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038494.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25556671 25561640 - MGP_NODShiLtJ_P0038494 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038495.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25556857 25565492 - MGP_NODShiLtJ_P0038495 Nisch protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038496.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25556966 25572789 - Nisch protein_coding processed_transcript MGP_NODShiLtJ_T0038497.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25557164 25565812 - Nisch protein_coding processed_transcript MGP_NODShiLtJ_T0038498.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25561019 25562999 - Nisch protein_coding processed_transcript MGP_NODShiLtJ_T0038499.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25563482 25586993 - MGP_NODShiLtJ_P0038499 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038500.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25563682 25565119 - Nisch protein_coding processed_transcript MGP_NODShiLtJ_T0038501.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25565180 25571667 - MGP_NODShiLtJ_P0038501 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038502.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25565859 25586867 - MGP_NODShiLtJ_P0038502 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038503.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25565895 25586867 - MGP_NODShiLtJ_P0038503 Nisch protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038504.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25566533 25567622 - Nisch protein_coding processed_transcript MGP_NODShiLtJ_T0038505.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25567282 25583478 - MGP_NODShiLtJ_P0038505 Nisch protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038506.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25568509 25571259 - Nisch protein_coding retained_intron MGP_NODShiLtJ_T0038507.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25581110 25586867 - Nisch protein_coding processed_transcript MGP_NODShiLtJ_T0038508.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25582032 25586868 - MGP_NODShiLtJ_P0038508 Nisch protein_coding protein_coding MGP_NODShiLtJ_T0038509.1 MGP_NODShiLtJ_G0020955.1 mouse_genomes_project 14 25583472 25597169 - Nisch protein_coding processed_transcript MGP_NODShiLtJ_T0038917.1 MGP_NODShiLtJ_G0021098.1 mouse_genomes_project 14 47562136 47610787 - MGP_NODShiLtJ_P0038917 Tep1 protein_coding protein_coding MGP_NODShiLtJ_T0039139.1 MGP_NODShiLtJ_G0021154.1 mouse_genomes_project 14 51985808 51989970 + MGP_NODShiLtJ_P0039139 Psmb11 protein_coding protein_coding MGP_NODShiLtJ_T0038424.1 MGP_NODShiLtJ_G0020944.1 mouse_genomes_project 14 25225361 25240675 + MGP_NODShiLtJ_P0038424 Itih4 protein_coding protein_coding MGP_NODShiLtJ_T0038425.1 MGP_NODShiLtJ_G0020944.1 mouse_genomes_project 14 25225387 25240538 + MGP_NODShiLtJ_P0038425 Itih4 protein_coding protein_coding MGP_NODShiLtJ_T0038426.1 MGP_NODShiLtJ_G0020944.1 mouse_genomes_project 14 25225387 25240642 + MGP_NODShiLtJ_P0038426 Itih4 protein_coding protein_coding MGP_NODShiLtJ_T0038427.1 MGP_NODShiLtJ_G0020944.1 mouse_genomes_project 14 25225406 25240540 + MGP_NODShiLtJ_P0038427 Itih4 protein_coding protein_coding MGP_NODShiLtJ_T0038428.1 MGP_NODShiLtJ_G0020944.1 mouse_genomes_project 14 25237924 25240543 + Itih4 protein_coding retained_intron MGP_NODShiLtJ_T0037993.1 MGP_NODShiLtJ_G0020820.1 mouse_genomes_project 14 442468 512874 + MGP_NODShiLtJ_P0037993 Pxk protein_coding protein_coding MGP_NODShiLtJ_T0037994.1 MGP_NODShiLtJ_G0020820.1 mouse_genomes_project 14 442468 512874 + MGP_NODShiLtJ_P0037994 Pxk protein_coding protein_coding MGP_NODShiLtJ_T0098849.1 MGP_NODShiLtJ_G0037243.1 mouse_genomes_project 14 54475444 54475503 - Gm27635 snRNA snRNA MGP_NODShiLtJ_T0038083.1 MGP_NODShiLtJ_G0020852.1 mouse_genomes_project 14 11548400 11591495 - MGP_NODShiLtJ_P0038083 Nr1d2 protein_coding protein_coding MGP_NODShiLtJ_T0038084.1 MGP_NODShiLtJ_G0020852.1 mouse_genomes_project 14 11562007 11591399 - Nr1d2 protein_coding retained_intron MGP_NODShiLtJ_T0040059.1 MGP_NODShiLtJ_G0021477.1 mouse_genomes_project 14 113498609 113499014 - MGP_NODShiLtJ_P0040059 Gm4775 protein_coding protein_coding MGP_NODShiLtJ_T0039883.1 MGP_NODShiLtJ_G0021412.1 mouse_genomes_project 14 74806847 74833726 - MGP_NODShiLtJ_P0039883 Slc25a30 protein_coding protein_coding MGP_NODShiLtJ_T0002564.1 MGP_NODShiLtJ_G0002458.1 mouse_genomes_project 14 49915594 49916144 + MGP_NODShiLtJ_P0002564 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012902.1 MGP_NODShiLtJ_G0011010.1 mouse_genomes_project 14 59713688 59716638 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038524.1 MGP_NODShiLtJ_G0020961.1 mouse_genomes_project 14 25719129 25756646 + MGP_NODShiLtJ_P0038524 Capn7 protein_coding protein_coding MGP_NODShiLtJ_T0038525.1 MGP_NODShiLtJ_G0020961.1 mouse_genomes_project 14 25719166 25756648 + MGP_NODShiLtJ_P0038525 Capn7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038526.1 MGP_NODShiLtJ_G0020961.1 mouse_genomes_project 14 25719198 25756646 + MGP_NODShiLtJ_P0038526 Capn7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100096.1 MGP_NODShiLtJ_G0038490.1 mouse_genomes_project 14 27740387 27740516 + Gm25498 snoRNA snoRNA MGP_NODShiLtJ_T0039736.1 MGP_NODShiLtJ_G0021367.1 mouse_genomes_project 14 68382951 68625846 + MGP_NODShiLtJ_P0039736 Pebp4 protein_coding protein_coding MGP_NODShiLtJ_T0038065.1 MGP_NODShiLtJ_G0020846.1 mouse_genomes_project 14 8488054 8568711 - MGP_NODShiLtJ_P0038065 Lrrc3b protein_coding protein_coding MGP_NODShiLtJ_T0038066.1 MGP_NODShiLtJ_G0020846.1 mouse_genomes_project 14 8488055 8566245 - MGP_NODShiLtJ_P0038066 Lrrc3b protein_coding protein_coding MGP_NODShiLtJ_T0012890.1 MGP_NODShiLtJ_G0010998.1 mouse_genomes_project 14 50891186 50891628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038709.1 MGP_NODShiLtJ_G0021020.1 mouse_genomes_project 14 32049346 32055956 + MGP_NODShiLtJ_P0038709 Lrit2 protein_coding protein_coding MGP_NODShiLtJ_T0038586.1 MGP_NODShiLtJ_G0020974.1 mouse_genomes_project 14 26637357 26650928 + MGP_NODShiLtJ_P0038586 protein_coding protein_coding MGP_NODShiLtJ_T0039234.1 MGP_NODShiLtJ_G0021180.1 mouse_genomes_project 14 52919683 52931191 + MGP_NODShiLtJ_P0039234 Dhrs4 protein_coding protein_coding MGP_NODShiLtJ_T0017281.1 MGP_NODShiLtJ_G0015150.1 mouse_genomes_project 14 112853479 112860285 + 4930449E01Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017282.1 MGP_NODShiLtJ_G0015150.1 mouse_genomes_project 14 112855599 112855959 + 4930449E01Rik processed_transcript TEC MGP_NODShiLtJ_T0017283.1 MGP_NODShiLtJ_G0015150.1 mouse_genomes_project 14 112858239 112860292 + 4930449E01Rik processed_transcript lincRNA MGP_NODShiLtJ_T0038344.1 MGP_NODShiLtJ_G0020919.1 mouse_genomes_project 14 20644418 20888153 + MGP_NODShiLtJ_P0038344 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038345.1 MGP_NODShiLtJ_G0020919.1 mouse_genomes_project 14 20646096 20786729 + MGP_NODShiLtJ_P0038345 protein_coding protein_coding MGP_NODShiLtJ_T0038346.1 MGP_NODShiLtJ_G0020919.1 mouse_genomes_project 14 20738409 20741153 + MGP_NODShiLtJ_P0038346 protein_coding protein_coding MGP_NODShiLtJ_T0038347.1 MGP_NODShiLtJ_G0020919.1 mouse_genomes_project 14 20801585 20888222 + MGP_NODShiLtJ_P0038347 protein_coding protein_coding MGP_NODShiLtJ_T0000899.1 MGP_NODShiLtJ_G0000828.1 mouse_genomes_project 14 67936973 67940534 - TEC TEC MGP_NODShiLtJ_T0002597.1 MGP_NODShiLtJ_G0002486.1 mouse_genomes_project 14 50663363 50663860 + MGP_NODShiLtJ_P0002597 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0100103.1 MGP_NODShiLtJ_G0038497.1 mouse_genomes_project 14 49268516 49268606 + Gm23758 snoRNA snoRNA MGP_NODShiLtJ_T0039681.1 MGP_NODShiLtJ_G0021343.1 mouse_genomes_project 14 65765230 65975846 + MGP_NODShiLtJ_P0039681 Ebf2 protein_coding protein_coding MGP_NODShiLtJ_T0039682.1 MGP_NODShiLtJ_G0021343.1 mouse_genomes_project 14 65765524 65976986 + MGP_NODShiLtJ_P0039682 Ebf2 protein_coding protein_coding MGP_NODShiLtJ_T0039683.1 MGP_NODShiLtJ_G0021343.1 mouse_genomes_project 14 65765541 65768453 + Ebf2 protein_coding retained_intron MGP_NODShiLtJ_T0039684.1 MGP_NODShiLtJ_G0021343.1 mouse_genomes_project 14 65766582 65974756 + MGP_NODShiLtJ_P0039684 Ebf2 protein_coding protein_coding MGP_NODShiLtJ_T0038129.1 MGP_NODShiLtJ_G0020866.1 mouse_genomes_project 14 14065018 14085411 + MGP_NODShiLtJ_P0038129 Fam149b protein_coding protein_coding MGP_NODShiLtJ_T0038130.1 MGP_NODShiLtJ_G0020866.1 mouse_genomes_project 14 14065018 14101954 + MGP_NODShiLtJ_P0038130 Fam149b protein_coding protein_coding MGP_NODShiLtJ_T0038131.1 MGP_NODShiLtJ_G0020866.1 mouse_genomes_project 14 14065018 14101954 + MGP_NODShiLtJ_P0038131 Fam149b protein_coding protein_coding MGP_NODShiLtJ_T0038132.1 MGP_NODShiLtJ_G0020866.1 mouse_genomes_project 14 14065078 14101954 + MGP_NODShiLtJ_P0038132 Fam149b protein_coding protein_coding MGP_NODShiLtJ_T0003496.1 MGP_NODShiLtJ_G0003176.1 mouse_genomes_project 14 52375646 52375977 + Gm29015 antisense antisense MGP_NODShiLtJ_T0003512.1 MGP_NODShiLtJ_G0003188.1 mouse_genomes_project 14 62455842 62459300 - Gm17116 antisense antisense MGP_NODShiLtJ_T0039403.1 MGP_NODShiLtJ_G0021236.1 mouse_genomes_project 14 54515620 54615898 + MGP_NODShiLtJ_P0039403 Zmym2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038912.1 MGP_NODShiLtJ_G0021093.1 mouse_genomes_project 14 47367272 47368249 - MGP_NODShiLtJ_P0038912 protein_coding protein_coding MGP_NODShiLtJ_T0002672.1 MGP_NODShiLtJ_G0002545.1 mouse_genomes_project 14 50015655 50015924 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0101648.1 MGP_NODShiLtJ_G0039817.1 mouse_genomes_project 14 12702316 12706626 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012884.1 MGP_NODShiLtJ_G0010992.1 mouse_genomes_project 14 48193942 48227512 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038696.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31846210 31945456 - MGP_NODShiLtJ_P0038696 Ccser2 protein_coding protein_coding MGP_NODShiLtJ_T0038697.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31846210 31945366 - MGP_NODShiLtJ_P0038697 Ccser2 protein_coding protein_coding MGP_NODShiLtJ_T0038698.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31850114 31878175 - Ccser2 protein_coding processed_transcript MGP_NODShiLtJ_T0038699.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31850115 31910436 - MGP_NODShiLtJ_P0038699 Ccser2 protein_coding protein_coding MGP_NODShiLtJ_T0038700.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31850370 31880959 - MGP_NODShiLtJ_P0038700 Ccser2 protein_coding protein_coding MGP_NODShiLtJ_T0038701.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31850417 31891851 - MGP_NODShiLtJ_P0038701 Ccser2 protein_coding protein_coding MGP_NODShiLtJ_T0038702.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31850633 31892053 - MGP_NODShiLtJ_P0038702 Ccser2 protein_coding protein_coding MGP_NODShiLtJ_T0038703.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31850792 31899408 - MGP_NODShiLtJ_P0038703 Ccser2 protein_coding protein_coding MGP_NODShiLtJ_T0038704.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31850844 31857575 - Ccser2 protein_coding retained_intron MGP_NODShiLtJ_T0038705.1 MGP_NODShiLtJ_G0021017.1 mouse_genomes_project 14 31872620 31914810 - Ccser2 protein_coding processed_transcript MGP_NODShiLtJ_T0039577.1 MGP_NODShiLtJ_G0021304.1 mouse_genomes_project 14 61934711 62152967 + MGP_NODShiLtJ_P0039577 Xkr6 protein_coding protein_coding MGP_NODShiLtJ_T0039578.1 MGP_NODShiLtJ_G0021304.1 mouse_genomes_project 14 61934883 61990667 + MGP_NODShiLtJ_P0039578 Xkr6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039579.1 MGP_NODShiLtJ_G0021304.1 mouse_genomes_project 14 61935234 61987294 + MGP_NODShiLtJ_P0039579 Xkr6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039580.1 MGP_NODShiLtJ_G0021304.1 mouse_genomes_project 14 61983641 61987582 + Xkr6 protein_coding processed_transcript MGP_NODShiLtJ_T0039581.1 MGP_NODShiLtJ_G0021304.1 mouse_genomes_project 14 62124903 62152177 + MGP_NODShiLtJ_P0039581 Xkr6 protein_coding protein_coding MGP_NODShiLtJ_T0012904.1 MGP_NODShiLtJ_G0011012.1 mouse_genomes_project 14 63210860 63211179 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100094.1 MGP_NODShiLtJ_G0038488.1 mouse_genomes_project 14 25381227 25381303 - Snord19 snoRNA snoRNA MGP_NODShiLtJ_T0002489.1 MGP_NODShiLtJ_G0002392.1 mouse_genomes_project 14 51524205 51524262 + MGP_NODShiLtJ_P0002489 Traj25 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039756.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68886137 68938953 - MGP_NODShiLtJ_P0039756 Slc39a14 protein_coding protein_coding MGP_NODShiLtJ_T0039757.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68889651 68935959 - MGP_NODShiLtJ_P0039757 Slc39a14 protein_coding protein_coding MGP_NODShiLtJ_T0039758.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68889665 68938953 - MGP_NODShiLtJ_P0039758 Slc39a14 protein_coding protein_coding MGP_NODShiLtJ_T0039759.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68892249 68894718 - Slc39a14 protein_coding retained_intron MGP_NODShiLtJ_T0039760.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68894414 68897403 - Slc39a14 protein_coding retained_intron MGP_NODShiLtJ_T0039761.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68897436 68938942 - Slc39a14 protein_coding retained_intron MGP_NODShiLtJ_T0039762.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68898588 68935961 - Slc39a14 protein_coding retained_intron MGP_NODShiLtJ_T0039763.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68899270 68918998 - MGP_NODShiLtJ_P0039763 Slc39a14 protein_coding protein_coding MGP_NODShiLtJ_T0039764.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68899943 68938922 - MGP_NODShiLtJ_P0039764 Slc39a14 protein_coding protein_coding MGP_NODShiLtJ_T0039765.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68899977 68908576 - MGP_NODShiLtJ_P0039765 Slc39a14 protein_coding protein_coding MGP_NODShiLtJ_T0039766.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68900038 68938943 - MGP_NODShiLtJ_P0039766 Slc39a14 protein_coding protein_coding MGP_NODShiLtJ_T0039767.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68902210 68916318 - MGP_NODShiLtJ_P0039767 Slc39a14 protein_coding protein_coding MGP_NODShiLtJ_T0039768.1 MGP_NODShiLtJ_G0021375.1 mouse_genomes_project 14 68915876 68938953 - Slc39a14 protein_coding retained_intron MGP_NODShiLtJ_T0038638.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27919875 27996228 - MGP_NODShiLtJ_P0038638 Mapk8 protein_coding protein_coding MGP_NODShiLtJ_T0038639.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27923026 27996215 - MGP_NODShiLtJ_P0038639 Mapk8 protein_coding protein_coding MGP_NODShiLtJ_T0038640.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27924082 27996212 - MGP_NODShiLtJ_P0038640 Mapk8 protein_coding protein_coding MGP_NODShiLtJ_T0038641.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27924147 27957763 - MGP_NODShiLtJ_P0038641 Mapk8 protein_coding protein_coding MGP_NODShiLtJ_T0038642.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27924282 27932838 - Mapk8 protein_coding processed_transcript MGP_NODShiLtJ_T0038643.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27924285 27957746 - MGP_NODShiLtJ_P0038643 Mapk8 protein_coding protein_coding MGP_NODShiLtJ_T0038644.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27926364 27931670 - Mapk8 protein_coding retained_intron MGP_NODShiLtJ_T0038645.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27933467 27996228 - Mapk8 protein_coding retained_intron MGP_NODShiLtJ_T0038646.1 MGP_NODShiLtJ_G0020990.1 mouse_genomes_project 14 27950761 27996227 - Mapk8 protein_coding retained_intron MGP_NODShiLtJ_T0039615.1 MGP_NODShiLtJ_G0021322.1 mouse_genomes_project 14 63995132 64053048 + MGP_NODShiLtJ_P0039615 Nuggc protein_coding protein_coding MGP_NODShiLtJ_T0039616.1 MGP_NODShiLtJ_G0021322.1 mouse_genomes_project 14 64004326 64052961 + MGP_NODShiLtJ_P0039616 Nuggc protein_coding protein_coding MGP_NODShiLtJ_T0038127.1 MGP_NODShiLtJ_G0020864.1 mouse_genomes_project 14 14008361 14029124 + MGP_NODShiLtJ_P0038127 Nudt13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037995.1 MGP_NODShiLtJ_G0020821.1 mouse_genomes_project 14 510007 521534 - MGP_NODShiLtJ_P0037995 Pdhb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037996.1 MGP_NODShiLtJ_G0020821.1 mouse_genomes_project 14 513747 521594 - MGP_NODShiLtJ_P0037996 Pdhb protein_coding protein_coding MGP_NODShiLtJ_T0002495.1 MGP_NODShiLtJ_G0002398.1 mouse_genomes_project 14 51529749 51529810 + MGP_NODShiLtJ_P0002495 Traj19 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039008.1 MGP_NODShiLtJ_G0021124.1 mouse_genomes_project 14 49003314 49005221 - MGP_NODShiLtJ_P0039008 Olfr221 protein_coding protein_coding MGP_NODShiLtJ_T0038972.1 MGP_NODShiLtJ_G0021117.1 mouse_genomes_project 14 48836743 48839466 + Slc39a2 protein_coding retained_intron MGP_NODShiLtJ_T0038973.1 MGP_NODShiLtJ_G0021117.1 mouse_genomes_project 14 48837287 48840408 + MGP_NODShiLtJ_P0038973 Slc39a2 protein_coding protein_coding MGP_NODShiLtJ_T0038974.1 MGP_NODShiLtJ_G0021117.1 mouse_genomes_project 14 48837333 48839459 + MGP_NODShiLtJ_P0038974 Slc39a2 protein_coding protein_coding MGP_NODShiLtJ_T0039074.1 MGP_NODShiLtJ_G0021133.1 mouse_genomes_project 14 49348543 49350363 - MGP_NODShiLtJ_P0039074 Olfr1513 protein_coding protein_coding MGP_NODShiLtJ_T0038169.1 MGP_NODShiLtJ_G0020880.1 mouse_genomes_project 14 14478898 14489725 - MGP_NODShiLtJ_P0038169 Ndst2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038382.1 MGP_NODShiLtJ_G0020935.1 mouse_genomes_project 14 24268640 24299992 + MGP_NODShiLtJ_P0038382 Chdh protein_coding protein_coding MGP_NODShiLtJ_T0038383.1 MGP_NODShiLtJ_G0020935.1 mouse_genomes_project 14 24268788 24286742 + Chdh protein_coding processed_transcript MGP_NODShiLtJ_T0038384.1 MGP_NODShiLtJ_G0020935.1 mouse_genomes_project 14 24282260 24297775 + MGP_NODShiLtJ_P0038384 Chdh protein_coding protein_coding MGP_NODShiLtJ_T0039357.1 MGP_NODShiLtJ_G0021207.1 mouse_genomes_project 14 53230691 53234296 + MGP_NODShiLtJ_P0039357 Ltb4r1 protein_coding protein_coding MGP_NODShiLtJ_T0100112.1 MGP_NODShiLtJ_G0038506.1 mouse_genomes_project 14 60912669 60912828 + Gm25162 snoRNA snoRNA MGP_NODShiLtJ_T0100105.1 MGP_NODShiLtJ_G0038499.1 mouse_genomes_project 14 53783778 53783904 + Gm24118 snoRNA snoRNA MGP_NODShiLtJ_T0002488.1 MGP_NODShiLtJ_G0002391.1 mouse_genomes_project 14 51522962 51523022 + MGP_NODShiLtJ_P0002488 Traj26 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039232.1 MGP_NODShiLtJ_G0021179.1 mouse_genomes_project 14 52636859 52653010 + MGP_NODShiLtJ_P0039232 Dhrs2 protein_coding protein_coding MGP_NODShiLtJ_T0039233.1 MGP_NODShiLtJ_G0021179.1 mouse_genomes_project 14 52646335 52652823 + MGP_NODShiLtJ_P0039233 Dhrs2 protein_coding protein_coding MGP_NODShiLtJ_T0039524.1 MGP_NODShiLtJ_G0021280.1 mouse_genomes_project 14 59449287 59532441 - MGP_NODShiLtJ_P0039524 Kpna3 protein_coding protein_coding MGP_NODShiLtJ_T0040043.1 MGP_NODShiLtJ_G0021471.1 mouse_genomes_project 14 110989771 111021924 - MGP_NODShiLtJ_P0040043 Ednrb protein_coding protein_coding MGP_NODShiLtJ_T0040044.1 MGP_NODShiLtJ_G0021471.1 mouse_genomes_project 14 110989772 111021447 - MGP_NODShiLtJ_P0040044 Ednrb protein_coding protein_coding MGP_NODShiLtJ_T0006643.1 MGP_NODShiLtJ_G0005482.1 mouse_genomes_project 14 55284376 55285121 + 1700039M10Rik lincRNA lincRNA MGP_NODShiLtJ_T0098829.1 MGP_NODShiLtJ_G0037223.1 mouse_genomes_project 14 11388818 11388881 + Gm27851 snRNA snRNA MGP_NODShiLtJ_T0038608.1 MGP_NODShiLtJ_G0020979.1 mouse_genomes_project 14 26889157 26947625 - MGP_NODShiLtJ_P0038608 Chat protein_coding protein_coding MGP_NODShiLtJ_T0002566.1 MGP_NODShiLtJ_G0002460.1 mouse_genomes_project 14 49966631 49967247 + MGP_NODShiLtJ_P0002566 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002567.1 MGP_NODShiLtJ_G0002460.1 mouse_genomes_project 14 49966675 49967247 + MGP_NODShiLtJ_P0002567 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012898.1 MGP_NODShiLtJ_G0011006.1 mouse_genomes_project 14 55885386 55885744 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038683.1 MGP_NODShiLtJ_G0021012.1 mouse_genomes_project 14 29210455 29219977 - MGP_NODShiLtJ_P0038683 Opn4 protein_coding protein_coding MGP_NODShiLtJ_T0038684.1 MGP_NODShiLtJ_G0021012.1 mouse_genomes_project 14 29212180 29219977 - MGP_NODShiLtJ_P0038684 Opn4 protein_coding protein_coding MGP_NODShiLtJ_T0012881.1 MGP_NODShiLtJ_G0010989.1 mouse_genomes_project 14 46190847 46191608 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039384.1 MGP_NODShiLtJ_G0021228.1 mouse_genomes_project 14 53809680 53813085 - MGP_NODShiLtJ_P0039384 Gzmb protein_coding protein_coding MGP_NODShiLtJ_T0040066.1 MGP_NODShiLtJ_G0021483.1 mouse_genomes_project 14 126298607 126343045 + Gpc5 protein_coding retained_intron MGP_NODShiLtJ_T0040067.1 MGP_NODShiLtJ_G0021483.1 mouse_genomes_project 14 126298642 128093208 + MGP_NODShiLtJ_P0040067 Gpc5 protein_coding protein_coding MGP_NODShiLtJ_T0040068.1 MGP_NODShiLtJ_G0021483.1 mouse_genomes_project 14 126298664 126667285 + MGP_NODShiLtJ_P0040068 Gpc5 protein_coding protein_coding MGP_NODShiLtJ_T0040069.1 MGP_NODShiLtJ_G0021483.1 mouse_genomes_project 14 126299018 128092466 + MGP_NODShiLtJ_P0040069 Gpc5 protein_coding protein_coding MGP_NODShiLtJ_T0009887.1 MGP_NODShiLtJ_G0008020.1 mouse_genomes_project 14 20619073 20619135 - Mir7672 miRNA miRNA MGP_NODShiLtJ_T0039875.1 MGP_NODShiLtJ_G0021408.1 mouse_genomes_project 14 74471873 74550750 + MGP_NODShiLtJ_P0039875 Siah3 protein_coding protein_coding MGP_NODShiLtJ_T0003533.1 MGP_NODShiLtJ_G0003202.1 mouse_genomes_project 14 135257249 135261471 + Gm15735 antisense antisense MGP_NODShiLtJ_T0012918.1 MGP_NODShiLtJ_G0011026.1 mouse_genomes_project 14 105988296 105988636 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002674.1 MGP_NODShiLtJ_G0002547.1 mouse_genomes_project 14 50350010 50350279 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0101280.1 MGP_NODShiLtJ_G0039554.1 mouse_genomes_project 14 68130813 68216878 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0100139.1 MGP_NODShiLtJ_G0038533.1 mouse_genomes_project 14 114393732 114393859 + Gm23437 snoRNA snoRNA MGP_NODShiLtJ_T0012873.1 MGP_NODShiLtJ_G0010981.1 mouse_genomes_project 14 27403708 27404719 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012857.1 MGP_NODShiLtJ_G0010965.1 mouse_genomes_project 14 12669940 12671079 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039774.1 MGP_NODShiLtJ_G0021379.1 mouse_genomes_project 14 69067677 69115373 - MGP_NODShiLtJ_P0039774 Bmp1 protein_coding protein_coding MGP_NODShiLtJ_T0040038.1 MGP_NODShiLtJ_G0021469.1 mouse_genomes_project 14 110658268 110768177 + MGP_NODShiLtJ_P0040038 Scel protein_coding protein_coding MGP_NODShiLtJ_T0038733.1 MGP_NODShiLtJ_G0021031.1 mouse_genomes_project 14 37014183 37016878 + MGP_NODShiLtJ_P0038733 Sftpa1 protein_coding protein_coding MGP_NODShiLtJ_T0038734.1 MGP_NODShiLtJ_G0021031.1 mouse_genomes_project 14 37014189 37018854 + MGP_NODShiLtJ_P0038734 Sftpa1 protein_coding protein_coding MGP_NODShiLtJ_T0038672.1 MGP_NODShiLtJ_G0021009.1 mouse_genomes_project 14 29019933 29117598 - MGP_NODShiLtJ_P0038672 Bmpr1a protein_coding protein_coding MGP_NODShiLtJ_T0038673.1 MGP_NODShiLtJ_G0021009.1 mouse_genomes_project 14 29023685 29071784 - MGP_NODShiLtJ_P0038673 Bmpr1a protein_coding protein_coding MGP_NODShiLtJ_T0038674.1 MGP_NODShiLtJ_G0021009.1 mouse_genomes_project 14 29045470 29119430 - MGP_NODShiLtJ_P0038674 Bmpr1a protein_coding protein_coding MGP_NODShiLtJ_T0038675.1 MGP_NODShiLtJ_G0021009.1 mouse_genomes_project 14 29054835 29117439 - MGP_NODShiLtJ_P0038675 Bmpr1a protein_coding protein_coding MGP_NODShiLtJ_T0002458.1 MGP_NODShiLtJ_G0002364.1 mouse_genomes_project 14 51486437 51486502 + Traj57 TR_J_gene processed_transcript MGP_NODShiLtJ_T0002459.1 MGP_NODShiLtJ_G0002364.1 mouse_genomes_project 14 51486439 51486502 + MGP_NODShiLtJ_P0002459 Traj57 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002601.1 MGP_NODShiLtJ_G0002490.1 mouse_genomes_project 14 50813721 50815125 + MGP_NODShiLtJ_P0002601 Trav12-3 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039976.1 MGP_NODShiLtJ_G0021449.1 mouse_genomes_project 14 101422028 101425241 + MGP_NODShiLtJ_P0039976 4921530L21Rik protein_coding protein_coding MGP_NODShiLtJ_T0039194.1 MGP_NODShiLtJ_G0021169.1 mouse_genomes_project 14 52329845 52332987 + MGP_NODShiLtJ_P0039194 Il25 protein_coding protein_coding MGP_NODShiLtJ_T0002496.1 MGP_NODShiLtJ_G0002399.1 mouse_genomes_project 14 51530140 51530206 + MGP_NODShiLtJ_P0002496 Traj18 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039592.1 MGP_NODShiLtJ_G0021311.1 mouse_genomes_project 14 62448996 62458402 + MGP_NODShiLtJ_P0039592 Prss52 protein_coding protein_coding MGP_NODShiLtJ_T0039593.1 MGP_NODShiLtJ_G0021312.1 mouse_genomes_project 14 62467100 62819570 - MGP_NODShiLtJ_P0039593 Msra protein_coding protein_coding MGP_NODShiLtJ_T0003459.1 MGP_NODShiLtJ_G0003150.1 mouse_genomes_project 14 4758905 4774363 - Gm3848 antisense antisense MGP_NODShiLtJ_T0003460.1 MGP_NODShiLtJ_G0003150.1 mouse_genomes_project 14 4773337 4774348 - Gm3848 antisense antisense MGP_NODShiLtJ_T0038125.1 MGP_NODShiLtJ_G0020862.1 mouse_genomes_project 14 13845386 13887115 - MGP_NODShiLtJ_P0038125 Kcnk5 protein_coding protein_coding MGP_NODShiLtJ_T0039558.1 MGP_NODShiLtJ_G0021296.1 mouse_genomes_project 14 61421889 61446221 + MGP_NODShiLtJ_P0039558 Ctsb protein_coding protein_coding MGP_NODShiLtJ_T0100100.1 MGP_NODShiLtJ_G0038494.1 mouse_genomes_project 14 32434733 32434864 - Gm23909 snoRNA snoRNA MGP_NODShiLtJ_T0039542.1 MGP_NODShiLtJ_G0021288.1 mouse_genomes_project 14 60907790 60937190 + MGP_NODShiLtJ_P0039542 Serpine3 protein_coding protein_coding MGP_NODShiLtJ_T0000903.1 MGP_NODShiLtJ_G0000832.1 mouse_genomes_project 14 70022955 70023495 - TEC TEC MGP_NODShiLtJ_T0100128.1 MGP_NODShiLtJ_G0038522.1 mouse_genomes_project 14 102360102 102360232 + Gm25133 snoRNA snoRNA MGP_NODShiLtJ_T0097764.1 MGP_NODShiLtJ_G0036176.1 mouse_genomes_project 14 110045851 110051721 - pseudogene pseudogene MGP_NODShiLtJ_T0009918.1 MGP_NODShiLtJ_G0008051.1 mouse_genomes_project 14 77479815 77479921 - Mir1971 miRNA miRNA MGP_NODShiLtJ_T0017246.1 MGP_NODShiLtJ_G0015135.1 mouse_genomes_project 14 52497 106623 - Gm10044 processed_transcript antisense MGP_NODShiLtJ_T0017248.1 MGP_NODShiLtJ_G0015135.1 mouse_genomes_project 14 65450 106547 - Gm10044 processed_transcript antisense MGP_NODShiLtJ_T0017249.1 MGP_NODShiLtJ_G0015135.1 mouse_genomes_project 14 74965 86000 - Gm10044 processed_transcript antisense MGP_NODShiLtJ_T0017250.1 MGP_NODShiLtJ_G0015135.1 mouse_genomes_project 14 82881 86070 - Gm10044 processed_transcript retained_intron MGP_NODShiLtJ_T0017251.1 MGP_NODShiLtJ_G0015135.1 mouse_genomes_project 14 83114 106525 - Gm10044 processed_transcript antisense MGP_NODShiLtJ_T0038170.1 MGP_NODShiLtJ_G0020881.1 mouse_genomes_project 14 14490051 14521665 - MGP_NODShiLtJ_P0038170 Camk2g protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038171.1 MGP_NODShiLtJ_G0020881.1 mouse_genomes_project 14 14490056 14549779 - MGP_NODShiLtJ_P0038171 Camk2g protein_coding protein_coding MGP_NODShiLtJ_T0038172.1 MGP_NODShiLtJ_G0020881.1 mouse_genomes_project 14 14490056 14549779 - MGP_NODShiLtJ_P0038172 Camk2g protein_coding protein_coding MGP_NODShiLtJ_T0038173.1 MGP_NODShiLtJ_G0020881.1 mouse_genomes_project 14 14490056 14549779 - MGP_NODShiLtJ_P0038173 Camk2g protein_coding protein_coding MGP_NODShiLtJ_T0012878.1 MGP_NODShiLtJ_G0010986.1 mouse_genomes_project 14 41761258 41761451 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039984.1 MGP_NODShiLtJ_G0021455.1 mouse_genomes_project 14 105663246 105837091 + MGP_NODShiLtJ_P0039984 Pibf1 protein_coding protein_coding MGP_NODShiLtJ_T0006669.1 MGP_NODShiLtJ_G0005502.1 mouse_genomes_project 14 113877579 113956224 - 1700128A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0006670.1 MGP_NODShiLtJ_G0005502.1 mouse_genomes_project 14 113902104 113956196 - 1700128A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0038200.1 MGP_NODShiLtJ_G0020887.1 mouse_genomes_project 14 15516623 15561065 - MGP_NODShiLtJ_P0038200 Dupd1 protein_coding protein_coding MGP_NODShiLtJ_T0038618.1 MGP_NODShiLtJ_G0020986.1 mouse_genomes_project 14 27361069 27449705 + MGP_NODShiLtJ_P0038618 Vstm4 protein_coding protein_coding MGP_NODShiLtJ_T0002550.1 MGP_NODShiLtJ_G0002446.1 mouse_genomes_project 14 49693084 49693532 + MGP_NODShiLtJ_P0002550 Trav6-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0097943.1 MGP_NODShiLtJ_G0036355.1 mouse_genomes_project 14 77604266 77604381 - Gm26197 rRNA rRNA MGP_NODShiLtJ_T0002481.1 MGP_NODShiLtJ_G0002384.1 mouse_genomes_project 14 51513994 51514051 + MGP_NODShiLtJ_P0002481 Traj33 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038032.1 MGP_NODShiLtJ_G0020832.1 mouse_genomes_project 14 5196635 5685443 - MGP_NODShiLtJ_P0038032 Cadps protein_coding protein_coding MGP_NODShiLtJ_T0038033.1 MGP_NODShiLtJ_G0020832.1 mouse_genomes_project 14 5196637 5685443 - MGP_NODShiLtJ_P0038033 Cadps protein_coding protein_coding MGP_NODShiLtJ_T0038034.1 MGP_NODShiLtJ_G0020832.1 mouse_genomes_project 14 5196637 5685443 - MGP_NODShiLtJ_P0038034 Cadps protein_coding protein_coding MGP_NODShiLtJ_T0038035.1 MGP_NODShiLtJ_G0020832.1 mouse_genomes_project 14 5196637 5685443 - MGP_NODShiLtJ_P0038035 Cadps protein_coding protein_coding MGP_NODShiLtJ_T0098856.1 MGP_NODShiLtJ_G0037250.1 mouse_genomes_project 14 74685705 74685812 - Gm23622 snRNA snRNA MGP_NODShiLtJ_T0006661.1 MGP_NODShiLtJ_G0005495.1 mouse_genomes_project 14 68779098 68791558 + Gm26908 lincRNA lincRNA MGP_NODShiLtJ_T0039354.1 MGP_NODShiLtJ_G0021205.1 mouse_genomes_project 14 53213574 53217987 - MGP_NODShiLtJ_P0039354 Cideb protein_coding protein_coding MGP_NODShiLtJ_T0039355.1 MGP_NODShiLtJ_G0021205.1 mouse_genomes_project 14 53214187 53217908 - Cideb protein_coding retained_intron MGP_NODShiLtJ_T0098875.1 MGP_NODShiLtJ_G0037269.1 mouse_genomes_project 14 130375340 130375440 + Gm23302 snRNA snRNA MGP_NODShiLtJ_T0097938.1 MGP_NODShiLtJ_G0036350.1 mouse_genomes_project 14 61140197 61140316 + n-R5s47 rRNA rRNA MGP_NODShiLtJ_T0009930.1 MGP_NODShiLtJ_G0008063.1 mouse_genomes_project 14 126244938 126245045 + Mir20a miRNA miRNA MGP_NODShiLtJ_T0100106.1 MGP_NODShiLtJ_G0038500.1 mouse_genomes_project 14 54459938 54460024 - Gm22498 snoRNA snoRNA MGP_NODShiLtJ_T0098858.1 MGP_NODShiLtJ_G0037252.1 mouse_genomes_project 14 87959877 87959967 - Gm23926 snRNA snRNA MGP_NODShiLtJ_T0101647.1 MGP_NODShiLtJ_G0039816.1 mouse_genomes_project 14 12295901 12296049 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0039942.1 MGP_NODShiLtJ_G0021437.1 mouse_genomes_project 14 78912396 78933633 - MGP_NODShiLtJ_P0039942 Wbp4 protein_coding protein_coding MGP_NODShiLtJ_T0039170.1 MGP_NODShiLtJ_G0021160.1 mouse_genomes_project 14 52075574 52077383 - MGP_NODShiLtJ_P0039170 Cebpe protein_coding protein_coding MGP_NODShiLtJ_T0003494.1 MGP_NODShiLtJ_G0003175.1 mouse_genomes_project 14 52371595 52372485 + Mhrt antisense antisense MGP_NODShiLtJ_T0003495.1 MGP_NODShiLtJ_G0003175.1 mouse_genomes_project 14 52371704 52376931 + Mhrt antisense antisense MGP_NODShiLtJ_T0038980.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948619 48951369 + MGP_NODShiLtJ_P0038980 Arhgef40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038981.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948733 48969281 + MGP_NODShiLtJ_P0038981 Arhgef40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038982.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948738 48969877 + MGP_NODShiLtJ_P0038982 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0038983.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948744 48954609 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0038984.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948764 48969248 + MGP_NODShiLtJ_P0038984 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0038985.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948786 48969259 + MGP_NODShiLtJ_P0038985 Arhgef40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038986.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948809 48969253 + MGP_NODShiLtJ_P0038986 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0038987.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948810 48969249 + MGP_NODShiLtJ_P0038987 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0038988.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948812 48949972 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0038989.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948815 48953070 + MGP_NODShiLtJ_P0038989 Arhgef40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038990.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948831 48969249 + MGP_NODShiLtJ_P0038990 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0038991.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948866 48955601 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0038992.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48948871 48952722 + MGP_NODShiLtJ_P0038992 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0038993.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48955712 48957953 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0038994.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48957949 48960936 + MGP_NODShiLtJ_P0038994 Arhgef40 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038995.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48959127 48960124 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0038996.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48961526 48969255 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0038997.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48965960 48969249 + MGP_NODShiLtJ_P0038997 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0038998.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48965988 48967588 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0038999.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48966035 48969252 + MGP_NODShiLtJ_P0038999 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0039000.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48967195 48968646 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0039001.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48967706 48969167 + MGP_NODShiLtJ_P0039001 Arhgef40 protein_coding protein_coding MGP_NODShiLtJ_T0039002.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48968112 48968996 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0039003.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48968126 48968938 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0039004.1 MGP_NODShiLtJ_G0021121.1 mouse_genomes_project 14 48968213 48968937 + Arhgef40 protein_coding retained_intron MGP_NODShiLtJ_T0006641.1 MGP_NODShiLtJ_G0005481.1 mouse_genomes_project 14 54295793 54298875 - Gm16973 lincRNA lincRNA MGP_NODShiLtJ_T0006642.1 MGP_NODShiLtJ_G0005481.1 mouse_genomes_project 14 54296860 54300782 - Gm16973 lincRNA lincRNA MGP_NODShiLtJ_T0038343.1 MGP_NODShiLtJ_G0020918.1 mouse_genomes_project 14 20608692 20619410 - MGP_NODShiLtJ_P0038343 Pde12 protein_coding protein_coding MGP_NODShiLtJ_T0039535.1 MGP_NODShiLtJ_G0021286.1 mouse_genomes_project 14 60609676 60678625 - MGP_NODShiLtJ_P0039535 Gucy1b2 protein_coding protein_coding MGP_NODShiLtJ_T0039536.1 MGP_NODShiLtJ_G0021286.1 mouse_genomes_project 14 60609791 60678622 - MGP_NODShiLtJ_P0039536 Gucy1b2 protein_coding protein_coding MGP_NODShiLtJ_T0039537.1 MGP_NODShiLtJ_G0021286.1 mouse_genomes_project 14 60635402 60677128 - MGP_NODShiLtJ_P0039537 Gucy1b2 protein_coding protein_coding MGP_NODShiLtJ_T0006658.1 MGP_NODShiLtJ_G0005493.1 mouse_genomes_project 14 68063474 68072612 - Gm27174 lincRNA lincRNA MGP_NODShiLtJ_T0038535.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 25944661 26051448 - MGP_NODShiLtJ_P0038535 Hacl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038539.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26004439 26051514 - MGP_NODShiLtJ_P0038539 Hacl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038540.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26012903 26051534 - MGP_NODShiLtJ_P0038540 Hacl1 protein_coding protein_coding MGP_NODShiLtJ_T0038541.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26013340 26019785 - Hacl1 protein_coding processed_transcript MGP_NODShiLtJ_T0038542.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26013644 26015802 - Hacl1 protein_coding processed_transcript MGP_NODShiLtJ_T0038543.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26013686 26051448 - MGP_NODShiLtJ_P0038543 Hacl1 protein_coding protein_coding MGP_NODShiLtJ_T0038544.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26013686 26051482 - MGP_NODShiLtJ_P0038544 Hacl1 protein_coding protein_coding MGP_NODShiLtJ_T0038545.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26013686 26051448 - MGP_NODShiLtJ_P0038545 Hacl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038546.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26013686 26051448 - MGP_NODShiLtJ_P0038546 Hacl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038547.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26031893 26051742 - MGP_NODShiLtJ_P0038547 Hacl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038548.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26035234 26051827 - MGP_NODShiLtJ_P0038548 Hacl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038549.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26036046 26051516 - Hacl1 protein_coding retained_intron MGP_NODShiLtJ_T0038550.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26042875 26051481 - Hacl1 protein_coding retained_intron MGP_NODShiLtJ_T0038551.1 MGP_NODShiLtJ_G0020966.1 mouse_genomes_project 14 26043014 26051856 - Hacl1 protein_coding retained_intron MGP_NODShiLtJ_T0039642.1 MGP_NODShiLtJ_G0021333.1 mouse_genomes_project 14 64619394 64679920 - MGP_NODShiLtJ_P0039642 Ptk2b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039643.1 MGP_NODShiLtJ_G0021333.1 mouse_genomes_project 14 64619396 64636341 - MGP_NODShiLtJ_P0039643 Ptk2b protein_coding protein_coding MGP_NODShiLtJ_T0039644.1 MGP_NODShiLtJ_G0021333.1 mouse_genomes_project 14 64619396 64749787 - MGP_NODShiLtJ_P0039644 Ptk2b protein_coding protein_coding MGP_NODShiLtJ_T0039645.1 MGP_NODShiLtJ_G0021333.1 mouse_genomes_project 14 64619401 64626805 - Ptk2b protein_coding retained_intron MGP_NODShiLtJ_T0039646.1 MGP_NODShiLtJ_G0021333.1 mouse_genomes_project 14 64619978 64749717 - MGP_NODShiLtJ_P0039646 Ptk2b protein_coding protein_coding MGP_NODShiLtJ_T0039647.1 MGP_NODShiLtJ_G0021333.1 mouse_genomes_project 14 64622404 64630029 - Ptk2b protein_coding retained_intron MGP_NODShiLtJ_T0039648.1 MGP_NODShiLtJ_G0021333.1 mouse_genomes_project 14 64638784 64749727 - Ptk2b protein_coding retained_intron MGP_NODShiLtJ_T0039519.1 MGP_NODShiLtJ_G0021277.1 mouse_genomes_project 14 59295314 59338605 - MGP_NODShiLtJ_P0039519 Sgcg protein_coding protein_coding MGP_NODShiLtJ_T0039520.1 MGP_NODShiLtJ_G0021277.1 mouse_genomes_project 14 59295699 59338539 - MGP_NODShiLtJ_P0039520 Sgcg protein_coding protein_coding MGP_NODShiLtJ_T0039521.1 MGP_NODShiLtJ_G0021277.1 mouse_genomes_project 14 59297071 59306696 - MGP_NODShiLtJ_P0039521 Sgcg protein_coding protein_coding MGP_NODShiLtJ_T0012895.1 MGP_NODShiLtJ_G0011003.1 mouse_genomes_project 14 53800893 53801902 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039700.1 MGP_NODShiLtJ_G0021349.1 mouse_genomes_project 14 66667954 66673158 + MGP_NODShiLtJ_P0039700 Nefl protein_coding protein_coding MGP_NODShiLtJ_T0012861.1 MGP_NODShiLtJ_G0010969.1 mouse_genomes_project 14 16445358 16445730 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038907.1 MGP_NODShiLtJ_G0021088.1 mouse_genomes_project 14 47214854 47215688 + MGP_NODShiLtJ_P0038907 protein_coding protein_coding MGP_NODShiLtJ_T0038532.1 MGP_NODShiLtJ_G0020964.1 mouse_genomes_project 14 25886873 25901652 + MGP_NODShiLtJ_P0038532 Eaf1 protein_coding protein_coding MGP_NODShiLtJ_T0038134.1 MGP_NODShiLtJ_G0020868.1 mouse_genomes_project 14 14109693 14112018 - MGP_NODShiLtJ_P0038134 Mrps16 protein_coding protein_coding MGP_NODShiLtJ_T0038904.1 MGP_NODShiLtJ_G0021085.1 mouse_genomes_project 14 47059237 47226654 + MGP_NODShiLtJ_P0038904 protein_coding protein_coding MGP_NODShiLtJ_T0039376.1 MGP_NODShiLtJ_G0021220.1 mouse_genomes_project 14 53583988 53587028 - MGP_NODShiLtJ_P0039376 Mcpt8 protein_coding protein_coding MGP_NODShiLtJ_T0002620.1 MGP_NODShiLtJ_G0002503.1 mouse_genomes_project 14 51299648 51300173 + MGP_NODShiLtJ_P0002620 Trav23 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0006598.1 MGP_NODShiLtJ_G0005451.1 mouse_genomes_project 14 17306842 17308196 - A830039N20Rik lincRNA lincRNA MGP_NODShiLtJ_T0101651.1 MGP_NODShiLtJ_G0039820.1 mouse_genomes_project 14 20030658 20039955 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0002463.1 MGP_NODShiLtJ_G0002368.1 mouse_genomes_project 14 51496291 51496354 + MGP_NODShiLtJ_P0002463 Traj50 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038754.1 MGP_NODShiLtJ_G0021040.1 mouse_genomes_project 14 41365170 41388185 + MGP_NODShiLtJ_P0038754 Gm14698 protein_coding protein_coding MGP_NODShiLtJ_T0012926.1 MGP_NODShiLtJ_G0011034.1 mouse_genomes_project 14 126850052 126850652 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006615.1 MGP_NODShiLtJ_G0005461.1 mouse_genomes_project 14 26346779 26368578 + D830044D21Rik lincRNA lincRNA MGP_NODShiLtJ_T0002528.1 MGP_NODShiLtJ_G0002429.1 mouse_genomes_project 14 51489936 51489990 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0002607.1 MGP_NODShiLtJ_G0002494.1 mouse_genomes_project 14 51045879 51046496 + MGP_NODShiLtJ_P0002607 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039509.1 MGP_NODShiLtJ_G0021273.1 mouse_genomes_project 14 58823787 58837019 + MGP_NODShiLtJ_P0039509 C1qtnf9 protein_coding protein_coding MGP_NODShiLtJ_T0038556.1 MGP_NODShiLtJ_G0020969.1 mouse_genomes_project 14 26484691 26519277 + MGP_NODShiLtJ_P0038556 Galnt15 protein_coding protein_coding MGP_NODShiLtJ_T0038557.1 MGP_NODShiLtJ_G0020969.1 mouse_genomes_project 14 26485112 26517307 + MGP_NODShiLtJ_P0038557 Galnt15 protein_coding protein_coding MGP_NODShiLtJ_T0003478.1 MGP_NODShiLtJ_G0003160.1 mouse_genomes_project 14 20576622 20587208 - Arf4os antisense antisense MGP_NODShiLtJ_T0038227.1 MGP_NODShiLtJ_G0020891.1 mouse_genomes_project 14 15702348 15704248 - MGP_NODShiLtJ_P0038227 Comtd1 protein_coding protein_coding MGP_NODShiLtJ_T0038228.1 MGP_NODShiLtJ_G0020891.1 mouse_genomes_project 14 15702477 15704195 - Comtd1 protein_coding retained_intron MGP_NODShiLtJ_T0038229.1 MGP_NODShiLtJ_G0020891.1 mouse_genomes_project 14 15702483 15703109 - Comtd1 protein_coding retained_intron MGP_NODShiLtJ_T0038753.1 MGP_NODShiLtJ_G0021039.1 mouse_genomes_project 14 41340656 41362547 + MGP_NODShiLtJ_P0038753 Psmc6 protein_coding protein_coding MGP_NODShiLtJ_T0039389.1 MGP_NODShiLtJ_G0021232.1 mouse_genomes_project 14 54170491 54258195 + MGP_NODShiLtJ_P0039389 Parp4 protein_coding protein_coding MGP_NODShiLtJ_T0039390.1 MGP_NODShiLtJ_G0021232.1 mouse_genomes_project 14 54253735 54258193 + Parp4 protein_coding retained_intron MGP_NODShiLtJ_T0040150.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135222632 135289483 - MGP_NODShiLtJ_P0040150 Tmtc4 protein_coding protein_coding MGP_NODShiLtJ_T0040151.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135222639 135289417 - MGP_NODShiLtJ_P0040151 Tmtc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040152.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135223392 135289342 - MGP_NODShiLtJ_P0040152 Tmtc4 protein_coding protein_coding MGP_NODShiLtJ_T0040153.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135223421 135289342 - MGP_NODShiLtJ_P0040153 Tmtc4 protein_coding protein_coding MGP_NODShiLtJ_T0040154.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135223567 135239689 - Tmtc4 protein_coding processed_transcript MGP_NODShiLtJ_T0040155.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135228466 135232794 - Tmtc4 protein_coding retained_intron MGP_NODShiLtJ_T0040156.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135236142 135289440 - Tmtc4 protein_coding retained_intron MGP_NODShiLtJ_T0040157.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135248715 135289475 - MGP_NODShiLtJ_P0040157 Tmtc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040158.1 MGP_NODShiLtJ_G0021516.1 mouse_genomes_project 14 135278651 135289369 - Tmtc4 protein_coding processed_transcript MGP_NODShiLtJ_T0039474.1 MGP_NODShiLtJ_G0021260.1 mouse_genomes_project 14 57190876 57211082 - MGP_NODShiLtJ_P0039474 protein_coding protein_coding MGP_NODShiLtJ_T0039546.1 MGP_NODShiLtJ_G0021291.1 mouse_genomes_project 14 61260748 61267711 - MGP_NODShiLtJ_P0039546 Defb48 protein_coding protein_coding MGP_NODShiLtJ_T0039284.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53035213 53038771 - MGP_NODShiLtJ_P0039284 Psme2 protein_coding protein_coding MGP_NODShiLtJ_T0039285.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53035214 53038785 - MGP_NODShiLtJ_P0039285 Psme2 protein_coding protein_coding MGP_NODShiLtJ_T0039286.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53035219 53036287 - Psme2 protein_coding retained_intron MGP_NODShiLtJ_T0039287.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53035219 53037194 - Psme2 protein_coding retained_intron MGP_NODShiLtJ_T0039288.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53035738 53037833 - Psme2 protein_coding retained_intron MGP_NODShiLtJ_T0039289.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53035756 53038797 - MGP_NODShiLtJ_P0039289 Psme2 protein_coding protein_coding MGP_NODShiLtJ_T0039290.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53035767 53038548 - Psme2 protein_coding retained_intron MGP_NODShiLtJ_T0039291.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53036876 53038657 - Psme2 protein_coding retained_intron MGP_NODShiLtJ_T0039292.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53036999 53038632 - Psme2 protein_coding retained_intron MGP_NODShiLtJ_T0039293.1 MGP_NODShiLtJ_G0021190.1 mouse_genomes_project 14 53037681 53038579 - Psme2 protein_coding retained_intron MGP_NODShiLtJ_T0038884.1 MGP_NODShiLtJ_G0021069.1 mouse_genomes_project 14 46397328 46411729 - MGP_NODShiLtJ_P0038884 Olfr722 protein_coding protein_coding MGP_NODShiLtJ_T0009927.1 MGP_NODShiLtJ_G0008060.1 mouse_genomes_project 14 126244452 126244536 + Mir17 miRNA miRNA MGP_NODShiLtJ_T0039309.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53076672 53086953 - MGP_NODShiLtJ_P0039309 Ipo4 protein_coding protein_coding MGP_NODShiLtJ_T0039310.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53076906 53086900 - MGP_NODShiLtJ_P0039310 Ipo4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039311.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53076988 53077705 - Ipo4 protein_coding retained_intron MGP_NODShiLtJ_T0039312.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53076991 53078836 - Ipo4 protein_coding processed_transcript MGP_NODShiLtJ_T0039313.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53076994 53077690 - Ipo4 protein_coding processed_transcript MGP_NODShiLtJ_T0039314.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53076996 53078663 - Ipo4 protein_coding retained_intron MGP_NODShiLtJ_T0039315.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53077012 53087226 - MGP_NODShiLtJ_P0039315 Ipo4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039316.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53077168 53089163 - Ipo4 protein_coding processed_transcript MGP_NODShiLtJ_T0039317.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53078570 53079197 - Ipo4 protein_coding retained_intron MGP_NODShiLtJ_T0039318.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53080055 53081933 - Ipo4 protein_coding retained_intron MGP_NODShiLtJ_T0039319.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53084196 53084927 - Ipo4 protein_coding retained_intron MGP_NODShiLtJ_T0039320.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53085025 53086479 - Ipo4 protein_coding retained_intron MGP_NODShiLtJ_T0039321.1 MGP_NODShiLtJ_G0021194.1 mouse_genomes_project 14 53085316 53086838 - Ipo4 protein_coding retained_intron MGP_NODShiLtJ_T0038372.1 MGP_NODShiLtJ_G0020931.1 mouse_genomes_project 14 23198334 23213853 + MGP_NODShiLtJ_P0038372 Lrtm1 protein_coding protein_coding MGP_NODShiLtJ_T0039680.1 MGP_NODShiLtJ_G0021342.1 mouse_genomes_project 14 65536088 65595752 - MGP_NODShiLtJ_P0039680 Ppp2r2a protein_coding protein_coding MGP_NODShiLtJ_T0002573.1 MGP_NODShiLtJ_G0002466.1 mouse_genomes_project 14 50209000 50210071 + MGP_NODShiLtJ_P0002573 Trav7n-4 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038080.1 MGP_NODShiLtJ_G0020851.1 mouse_genomes_project 14 10946804 11363185 + MGP_NODShiLtJ_P0038080 Thrb protein_coding protein_coding MGP_NODShiLtJ_T0038081.1 MGP_NODShiLtJ_G0020851.1 mouse_genomes_project 14 10946804 11364714 + MGP_NODShiLtJ_P0038081 Thrb protein_coding protein_coding MGP_NODShiLtJ_T0038082.1 MGP_NODShiLtJ_G0020851.1 mouse_genomes_project 14 11302564 11364712 + MGP_NODShiLtJ_P0038082 Thrb protein_coding protein_coding MGP_NODShiLtJ_T0002570.1 MGP_NODShiLtJ_G0002463.1 mouse_genomes_project 14 50125025 50125533 + MGP_NODShiLtJ_P0002570 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038867.1 MGP_NODShiLtJ_G0021064.1 mouse_genomes_project 14 45484706 45506353 + MGP_NODShiLtJ_P0038867 Ap5m1 protein_coding protein_coding MGP_NODShiLtJ_T0040005.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108614372 108778903 + MGP_NODShiLtJ_P0040005 Lmo7 protein_coding protein_coding MGP_NODShiLtJ_T0040006.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108614372 108820713 + MGP_NODShiLtJ_P0040006 Lmo7 protein_coding protein_coding MGP_NODShiLtJ_T0040007.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108711488 108766208 + Lmo7 protein_coding processed_transcript MGP_NODShiLtJ_T0040008.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108720915 108822641 + MGP_NODShiLtJ_P0040008 Lmo7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040009.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108722703 108769795 + Lmo7 protein_coding processed_transcript MGP_NODShiLtJ_T0040010.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108722913 108771214 + Lmo7 protein_coding retained_intron MGP_NODShiLtJ_T0040011.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108723225 108799364 + Lmo7 protein_coding retained_intron MGP_NODShiLtJ_T0040012.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108753582 108769598 + Lmo7 protein_coding processed_transcript MGP_NODShiLtJ_T0040013.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108762201 108822478 + MGP_NODShiLtJ_P0040013 Lmo7 protein_coding protein_coding MGP_NODShiLtJ_T0040014.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108766217 108820988 + MGP_NODShiLtJ_P0040014 Lmo7 protein_coding protein_coding MGP_NODShiLtJ_T0040015.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108769467 108786810 + Lmo7 protein_coding retained_intron MGP_NODShiLtJ_T0040016.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108769499 108773580 + Lmo7 protein_coding retained_intron MGP_NODShiLtJ_T0040017.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108805724 108817559 + Lmo7 protein_coding retained_intron MGP_NODShiLtJ_T0040018.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108813101 108819932 + Lmo7 protein_coding processed_transcript MGP_NODShiLtJ_T0040019.1 MGP_NODShiLtJ_G0021463.1 mouse_genomes_project 14 108816059 108819661 + Lmo7 protein_coding processed_transcript MGP_NODShiLtJ_T0012916.1 MGP_NODShiLtJ_G0011024.1 mouse_genomes_project 14 105244731 105245671 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012905.1 MGP_NODShiLtJ_G0011013.1 mouse_genomes_project 14 68311951 68315573 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100118.1 MGP_NODShiLtJ_G0038512.1 mouse_genomes_project 14 74915898 74916028 + Snora31 snoRNA snoRNA MGP_NODShiLtJ_T0002504.1 MGP_NODShiLtJ_G0002407.1 mouse_genomes_project 14 51540856 51540915 + MGP_NODShiLtJ_P0002504 Traj7 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0040127.1 MGP_NODShiLtJ_G0021511.1 mouse_genomes_project 14 134719990 134730097 - MGP_NODShiLtJ_P0040127 Zic5 protein_coding protein_coding MGP_NODShiLtJ_T0040128.1 MGP_NODShiLtJ_G0021511.1 mouse_genomes_project 14 134723607 134724452 - Zic5 protein_coding processed_transcript MGP_NODShiLtJ_T0100123.1 MGP_NODShiLtJ_G0038517.1 mouse_genomes_project 14 92359737 92359869 + Gm25415 snoRNA snoRNA MGP_NODShiLtJ_T0012888.1 MGP_NODShiLtJ_G0010996.1 mouse_genomes_project 14 49552173 49552741 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003484.1 MGP_NODShiLtJ_G0003166.1 mouse_genomes_project 14 33809100 33819192 + Gm20641 antisense antisense MGP_NODShiLtJ_T0002670.1 MGP_NODShiLtJ_G0002543.1 mouse_genomes_project 14 49765379 49765870 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0040045.1 MGP_NODShiLtJ_G0021472.1 mouse_genomes_project 14 111701478 111707482 - MGP_NODShiLtJ_P0040045 Pou4f1 protein_coding protein_coding MGP_NODShiLtJ_T0040046.1 MGP_NODShiLtJ_G0021472.1 mouse_genomes_project 14 111703775 111705072 - Pou4f1 protein_coding processed_transcript MGP_NODShiLtJ_T0002589.1 MGP_NODShiLtJ_G0002480.1 mouse_genomes_project 14 50576099 50587261 + MGP_NODShiLtJ_P0002589 Trav6-3 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002593.1 MGP_NODShiLtJ_G0002480.1 mouse_genomes_project 14 50586956 50587261 + MGP_NODShiLtJ_P0002593 Trav6-3 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039005.1 MGP_NODShiLtJ_G0021122.1 mouse_genomes_project 14 48969702 48986632 - MGP_NODShiLtJ_P0039005 Zfp219 protein_coding protein_coding MGP_NODShiLtJ_T0039006.1 MGP_NODShiLtJ_G0021122.1 mouse_genomes_project 14 48969711 48985612 - MGP_NODShiLtJ_P0039006 Zfp219 protein_coding protein_coding MGP_NODShiLtJ_T0098869.1 MGP_NODShiLtJ_G0037263.1 mouse_genomes_project 14 112599901 112600009 - Gm24207 snRNA snRNA MGP_NODShiLtJ_T0038888.1 MGP_NODShiLtJ_G0021072.1 mouse_genomes_project 14 46573467 46574592 - MGP_NODShiLtJ_P0038888 protein_coding protein_coding MGP_NODShiLtJ_T0006650.1 MGP_NODShiLtJ_G0005489.1 mouse_genomes_project 14 60687034 60690387 - lincRNA lincRNA MGP_NODShiLtJ_T0006651.1 MGP_NODShiLtJ_G0005489.1 mouse_genomes_project 14 60688456 60706302 - lincRNA lincRNA MGP_NODShiLtJ_T0039268.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53024764 53027991 + MGP_NODShiLtJ_P0039268 Psme1 protein_coding protein_coding MGP_NODShiLtJ_T0039269.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53025001 53028173 + MGP_NODShiLtJ_P0039269 Psme1 protein_coding protein_coding MGP_NODShiLtJ_T0039270.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53025046 53027287 + Psme1 protein_coding retained_intron MGP_NODShiLtJ_T0039271.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53025097 53028173 + Psme1 protein_coding retained_intron MGP_NODShiLtJ_T0039272.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53025109 53028019 + Psme1 protein_coding retained_intron MGP_NODShiLtJ_T0039273.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53025127 53027048 + Psme1 protein_coding retained_intron MGP_NODShiLtJ_T0039274.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53025179 53027587 + MGP_NODShiLtJ_P0039274 Psme1 protein_coding protein_coding MGP_NODShiLtJ_T0039275.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53025216 53028026 + MGP_NODShiLtJ_P0039275 Psme1 protein_coding protein_coding MGP_NODShiLtJ_T0039276.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53025216 53028026 + MGP_NODShiLtJ_P0039276 Psme1 protein_coding protein_coding MGP_NODShiLtJ_T0039277.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53026608 53028096 + Psme1 protein_coding retained_intron MGP_NODShiLtJ_T0039278.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53026678 53027592 + Psme1 protein_coding retained_intron MGP_NODShiLtJ_T0039279.1 MGP_NODShiLtJ_G0021188.1 mouse_genomes_project 14 53027392 53028174 + MGP_NODShiLtJ_P0039279 Psme1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002527.1 MGP_NODShiLtJ_G0002428.1 mouse_genomes_project 14 51489385 51489448 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0038201.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581149 15592341 - MGP_NODShiLtJ_P0038201 Dusp13 protein_coding protein_coding MGP_NODShiLtJ_T0038202.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581150 15592370 - MGP_NODShiLtJ_P0038202 Dusp13 protein_coding protein_coding MGP_NODShiLtJ_T0038203.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581150 15591275 - MGP_NODShiLtJ_P0038203 Dusp13 protein_coding protein_coding MGP_NODShiLtJ_T0038204.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581150 15599539 - MGP_NODShiLtJ_P0038204 Dusp13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038205.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581150 15592384 - MGP_NODShiLtJ_P0038205 Dusp13 protein_coding protein_coding MGP_NODShiLtJ_T0038206.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581150 15593748 - MGP_NODShiLtJ_P0038206 Dusp13 protein_coding protein_coding MGP_NODShiLtJ_T0038207.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581150 15599541 - MGP_NODShiLtJ_P0038207 Dusp13 protein_coding protein_coding MGP_NODShiLtJ_T0038208.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581153 15599561 - MGP_NODShiLtJ_P0038208 Dusp13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038209.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581344 15599539 - MGP_NODShiLtJ_P0038209 Dusp13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038210.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15581404 15599545 - MGP_NODShiLtJ_P0038210 Dusp13 protein_coding protein_coding MGP_NODShiLtJ_T0038211.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15591008 15599545 - Dusp13 protein_coding processed_transcript MGP_NODShiLtJ_T0038212.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15591017 15597365 - MGP_NODShiLtJ_P0038212 Dusp13 protein_coding protein_coding MGP_NODShiLtJ_T0038213.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15594380 15599557 - MGP_NODShiLtJ_P0038213 Dusp13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038214.1 MGP_NODShiLtJ_G0020888.1 mouse_genomes_project 14 15595745 15602100 - Dusp13 protein_coding processed_transcript MGP_NODShiLtJ_T0038270.1 MGP_NODShiLtJ_G0020899.1 mouse_genomes_project 14 19589324 19670760 + Zmiz1 protein_coding retained_intron MGP_NODShiLtJ_T0038271.1 MGP_NODShiLtJ_G0020899.1 mouse_genomes_project 14 19589363 19804596 + MGP_NODShiLtJ_P0038271 Zmiz1 protein_coding protein_coding MGP_NODShiLtJ_T0038272.1 MGP_NODShiLtJ_G0020899.1 mouse_genomes_project 14 19589406 19802572 + MGP_NODShiLtJ_P0038272 Zmiz1 protein_coding protein_coding MGP_NODShiLtJ_T0038273.1 MGP_NODShiLtJ_G0020899.1 mouse_genomes_project 14 19589431 19786061 + Zmiz1 protein_coding retained_intron MGP_NODShiLtJ_T0038274.1 MGP_NODShiLtJ_G0020899.1 mouse_genomes_project 14 19589694 19703534 + Zmiz1 protein_coding processed_transcript MGP_NODShiLtJ_T0038275.1 MGP_NODShiLtJ_G0020899.1 mouse_genomes_project 14 19740371 19778990 + Zmiz1 protein_coding processed_transcript MGP_NODShiLtJ_T0038276.1 MGP_NODShiLtJ_G0020899.1 mouse_genomes_project 14 19740852 19782222 + MGP_NODShiLtJ_P0038276 Zmiz1 protein_coding protein_coding MGP_NODShiLtJ_T0038277.1 MGP_NODShiLtJ_G0020899.1 mouse_genomes_project 14 19794682 19796258 + Zmiz1 protein_coding retained_intron MGP_NODShiLtJ_T0006606.1 MGP_NODShiLtJ_G0005457.1 mouse_genomes_project 14 19681814 19687918 - Gm26772 lincRNA lincRNA MGP_NODShiLtJ_T0002498.1 MGP_NODShiLtJ_G0002401.1 mouse_genomes_project 14 51532511 51532572 + MGP_NODShiLtJ_P0002498 Traj16 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039692.1 MGP_NODShiLtJ_G0021345.1 mouse_genomes_project 14 66282960 66308967 + MGP_NODShiLtJ_P0039692 Kctd9 protein_coding protein_coding MGP_NODShiLtJ_T0039693.1 MGP_NODShiLtJ_G0021345.1 mouse_genomes_project 14 66283121 66311621 + MGP_NODShiLtJ_P0039693 Kctd9 protein_coding protein_coding MGP_NODShiLtJ_T0039694.1 MGP_NODShiLtJ_G0021345.1 mouse_genomes_project 14 66283163 66297725 + MGP_NODShiLtJ_P0039694 Kctd9 protein_coding protein_coding MGP_NODShiLtJ_T0039695.1 MGP_NODShiLtJ_G0021345.1 mouse_genomes_project 14 66283308 66311472 + MGP_NODShiLtJ_P0039695 Kctd9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039696.1 MGP_NODShiLtJ_G0021345.1 mouse_genomes_project 14 66283360 66309722 + MGP_NODShiLtJ_P0039696 Kctd9 protein_coding protein_coding MGP_NODShiLtJ_T0038817.1 MGP_NODShiLtJ_G0021057.1 mouse_genomes_project 14 43759309 43762457 + MGP_NODShiLtJ_P0038817 Fbxo34 protein_coding protein_coding MGP_NODShiLtJ_T0002483.1 MGP_NODShiLtJ_G0002386.1 mouse_genomes_project 14 51516444 51516501 + MGP_NODShiLtJ_P0002483 Traj31 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0037984.1 MGP_NODShiLtJ_G0020815.1 mouse_genomes_project 14 106558 107029 + MGP_NODShiLtJ_P0037984 Gm26661 protein_coding protein_coding MGP_NODShiLtJ_T0039408.1 MGP_NODShiLtJ_G0021241.1 mouse_genomes_project 14 54695684 54720285 - MGP_NODShiLtJ_P0039408 Gja3 protein_coding protein_coding MGP_NODShiLtJ_T0100125.1 MGP_NODShiLtJ_G0038519.1 mouse_genomes_project 14 94539193 94539307 - Gm23225 snoRNA snoRNA MGP_NODShiLtJ_T0003490.1 MGP_NODShiLtJ_G0003172.1 mouse_genomes_project 14 51397104 51458101 - Gm42877 antisense antisense MGP_NODShiLtJ_T0003491.1 MGP_NODShiLtJ_G0003172.1 mouse_genomes_project 14 51435872 51458161 - Gm42877 antisense antisense MGP_NODShiLtJ_T0038167.1 MGP_NODShiLtJ_G0020878.1 mouse_genomes_project 14 14457595 14459711 + MGP_NODShiLtJ_P0038167 Chchd1 protein_coding protein_coding MGP_NODShiLtJ_T0039377.1 MGP_NODShiLtJ_G0021221.1 mouse_genomes_project 14 53602338 53605031 - MGP_NODShiLtJ_P0039377 Ctsg protein_coding protein_coding MGP_NODShiLtJ_T0038124.1 MGP_NODShiLtJ_G0020861.1 mouse_genomes_project 14 13778809 13786336 - MGP_NODShiLtJ_P0038124 Saysd1 protein_coding protein_coding MGP_NODShiLtJ_T0002469.1 MGP_NODShiLtJ_G0002372.1 mouse_genomes_project 14 51501024 51501087 + MGP_NODShiLtJ_P0002469 Traj46 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038514.1 MGP_NODShiLtJ_G0020958.1 mouse_genomes_project 14 25617795 25632639 - MGP_NODShiLtJ_P0038514 Phf7 protein_coding protein_coding MGP_NODShiLtJ_T0002569.1 MGP_NODShiLtJ_G0002462.1 mouse_genomes_project 14 50123977 50124554 + MGP_NODShiLtJ_P0002569 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039342.1 MGP_NODShiLtJ_G0021200.1 mouse_genomes_project 14 53133451 53136186 - MGP_NODShiLtJ_P0039342 Tinf2 protein_coding protein_coding MGP_NODShiLtJ_T0006637.1 MGP_NODShiLtJ_G0005477.1 mouse_genomes_project 14 48950288 48952783 - Gm16617 lincRNA lincRNA MGP_NODShiLtJ_T0039453.1 MGP_NODShiLtJ_G0021255.1 mouse_genomes_project 14 55678565 55775543 - MGP_NODShiLtJ_P0039453 Micu2 protein_coding protein_coding MGP_NODShiLtJ_T0100121.1 MGP_NODShiLtJ_G0038515.1 mouse_genomes_project 14 84038236 84038370 + Gm24774 snoRNA snoRNA MGP_NODShiLtJ_T0098276.1 MGP_NODShiLtJ_G0036684.1 mouse_genomes_project 14 54336847 54342780 - sense_intronic sense_intronic MGP_NODShiLtJ_T0039789.1 MGP_NODShiLtJ_G0021387.1 mouse_genomes_project 14 69241692 69247829 - MGP_NODShiLtJ_P0039789 Fgf17 protein_coding protein_coding MGP_NODShiLtJ_T0039553.1 MGP_NODShiLtJ_G0021295.1 mouse_genomes_project 14 61338191 61339811 + MGP_NODShiLtJ_P0039553 Defb42 protein_coding protein_coding MGP_NODShiLtJ_T0039554.1 MGP_NODShiLtJ_G0021295.1 mouse_genomes_project 14 61338229 61352270 + Defb42 protein_coding processed_transcript MGP_NODShiLtJ_T0039555.1 MGP_NODShiLtJ_G0021295.1 mouse_genomes_project 14 61338294 61339759 + MGP_NODShiLtJ_P0039555 Defb42 protein_coding protein_coding MGP_NODShiLtJ_T0039556.1 MGP_NODShiLtJ_G0021295.1 mouse_genomes_project 14 61339429 61339776 + MGP_NODShiLtJ_P0039556 Defb42 protein_coding protein_coding MGP_NODShiLtJ_T0039557.1 MGP_NODShiLtJ_G0021295.1 mouse_genomes_project 14 61349183 61351061 + Defb42 protein_coding processed_transcript MGP_NODShiLtJ_T0100126.1 MGP_NODShiLtJ_G0038520.1 mouse_genomes_project 14 96336578 96336708 - Gm24127 snoRNA snoRNA MGP_NODShiLtJ_T0039370.1 MGP_NODShiLtJ_G0021214.1 mouse_genomes_project 14 53370239 53373186 - MGP_NODShiLtJ_P0039370 Sdr39u1 protein_coding protein_coding MGP_NODShiLtJ_T0011263.1 MGP_NODShiLtJ_G0009396.1 mouse_genomes_project 14 51448232 51448572 + Gm23704 misc_RNA misc_RNA MGP_NODShiLtJ_T0100132.1 MGP_NODShiLtJ_G0038526.1 mouse_genomes_project 14 107109639 107109771 + Gm26367 snoRNA snoRNA MGP_NODShiLtJ_T0039346.1 MGP_NODShiLtJ_G0021202.1 mouse_genomes_project 14 53172879 53179205 - MGP_NODShiLtJ_P0039346 Rabggta protein_coding protein_coding MGP_NODShiLtJ_T0039347.1 MGP_NODShiLtJ_G0021202.1 mouse_genomes_project 14 53172883 53179183 - MGP_NODShiLtJ_P0039347 Rabggta protein_coding protein_coding MGP_NODShiLtJ_T0039348.1 MGP_NODShiLtJ_G0021202.1 mouse_genomes_project 14 53173331 53179264 - MGP_NODShiLtJ_P0039348 Rabggta protein_coding protein_coding MGP_NODShiLtJ_T0038147.1 MGP_NODShiLtJ_G0020872.1 mouse_genomes_project 14 14227526 14284785 - MGP_NODShiLtJ_P0038147 Ppp3cb protein_coding protein_coding MGP_NODShiLtJ_T0038148.1 MGP_NODShiLtJ_G0020872.1 mouse_genomes_project 14 14228705 14284759 - MGP_NODShiLtJ_P0038148 Ppp3cb protein_coding protein_coding MGP_NODShiLtJ_T0038149.1 MGP_NODShiLtJ_G0020872.1 mouse_genomes_project 14 14228867 14284724 - MGP_NODShiLtJ_P0038149 Ppp3cb protein_coding protein_coding MGP_NODShiLtJ_T0038150.1 MGP_NODShiLtJ_G0020872.1 mouse_genomes_project 14 14230389 14232575 - Ppp3cb protein_coding retained_intron MGP_NODShiLtJ_T0038151.1 MGP_NODShiLtJ_G0020872.1 mouse_genomes_project 14 14236401 14283200 - MGP_NODShiLtJ_P0038151 Ppp3cb protein_coding protein_coding MGP_NODShiLtJ_T0038152.1 MGP_NODShiLtJ_G0020872.1 mouse_genomes_project 14 14239100 14249992 - Ppp3cb protein_coding retained_intron MGP_NODShiLtJ_T0038153.1 MGP_NODShiLtJ_G0020872.1 mouse_genomes_project 14 14249423 14254704 - Ppp3cb protein_coding retained_intron MGP_NODShiLtJ_T0038154.1 MGP_NODShiLtJ_G0020872.1 mouse_genomes_project 14 14254590 14258415 - Ppp3cb protein_coding retained_intron MGP_NODShiLtJ_T0100093.1 MGP_NODShiLtJ_G0038487.1 mouse_genomes_project 14 25380169 25380248 - Gm24916 snoRNA snoRNA MGP_NODShiLtJ_T0002548.1 MGP_NODShiLtJ_G0002444.1 mouse_genomes_project 14 49628700 49629249 + MGP_NODShiLtJ_P0002548 Trav3-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012860.1 MGP_NODShiLtJ_G0010968.1 mouse_genomes_project 14 14103825 14103949 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038364.1 MGP_NODShiLtJ_G0020928.1 mouse_genomes_project 14 21714956 22610767 + MGP_NODShiLtJ_P0038364 Erc2 protein_coding protein_coding MGP_NODShiLtJ_T0038365.1 MGP_NODShiLtJ_G0020928.1 mouse_genomes_project 14 21872136 22437599 + MGP_NODShiLtJ_P0038365 Erc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039833.1 MGP_NODShiLtJ_G0021395.1 mouse_genomes_project 14 71977984 72086868 - Rb1 protein_coding processed_transcript MGP_NODShiLtJ_T0039834.1 MGP_NODShiLtJ_G0021395.1 mouse_genomes_project 14 71982414 72128579 - MGP_NODShiLtJ_P0039834 Rb1 protein_coding protein_coding MGP_NODShiLtJ_T0039835.1 MGP_NODShiLtJ_G0021395.1 mouse_genomes_project 14 71983887 71990181 - Rb1 protein_coding retained_intron MGP_NODShiLtJ_T0039836.1 MGP_NODShiLtJ_G0021395.1 mouse_genomes_project 14 71984124 72128398 - MGP_NODShiLtJ_P0039836 Rb1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039838.1 MGP_NODShiLtJ_G0021395.1 mouse_genomes_project 14 72027397 72028638 - Rb1 protein_coding processed_transcript MGP_NODShiLtJ_T0039839.1 MGP_NODShiLtJ_G0021395.1 mouse_genomes_project 14 72054934 72056906 - Rb1 protein_coding retained_intron MGP_NODShiLtJ_T0039840.1 MGP_NODShiLtJ_G0021395.1 mouse_genomes_project 14 72076542 72128398 - MGP_NODShiLtJ_P0039840 Rb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039386.1 MGP_NODShiLtJ_G0021230.1 mouse_genomes_project 14 53979624 54113425 + MGP_NODShiLtJ_P0039386 Rnf17 protein_coding protein_coding MGP_NODShiLtJ_T0017254.1 MGP_NODShiLtJ_G0015138.1 mouse_genomes_project 14 40753574 40908406 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017255.1 MGP_NODShiLtJ_G0015138.1 mouse_genomes_project 14 40753857 40929935 + processed_transcript processed_transcript MGP_NODShiLtJ_T0039584.1 MGP_NODShiLtJ_G0021307.1 mouse_genomes_project 14 62302796 62319450 - MGP_NODShiLtJ_P0039584 4930578I06Rik protein_coding protein_coding MGP_NODShiLtJ_T0012923.1 MGP_NODShiLtJ_G0011031.1 mouse_genomes_project 14 117276763 117277224 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098838.1 MGP_NODShiLtJ_G0037232.1 mouse_genomes_project 14 36225933 36226040 + Gm24388 snRNA snRNA MGP_NODShiLtJ_T0038664.1 MGP_NODShiLtJ_G0021005.1 mouse_genomes_project 14 28902594 28942099 + MGP_NODShiLtJ_P0038664 Glud1 protein_coding protein_coding MGP_NODShiLtJ_T0038665.1 MGP_NODShiLtJ_G0021005.1 mouse_genomes_project 14 28923238 28930118 + Glud1 protein_coding retained_intron MGP_NODShiLtJ_T0038666.1 MGP_NODShiLtJ_G0021005.1 mouse_genomes_project 14 28928092 28934775 + Glud1 protein_coding processed_transcript MGP_NODShiLtJ_T0038667.1 MGP_NODShiLtJ_G0021005.1 mouse_genomes_project 14 28930160 28939122 + MGP_NODShiLtJ_P0038667 Glud1 protein_coding protein_coding MGP_NODShiLtJ_T0038668.1 MGP_NODShiLtJ_G0021005.1 mouse_genomes_project 14 28931266 28938912 + Glud1 protein_coding processed_transcript MGP_NODShiLtJ_T0017267.1 MGP_NODShiLtJ_G0015145.1 mouse_genomes_project 14 65973736 65985773 - Gm10860 processed_transcript processed_transcript MGP_NODShiLtJ_T0039922.1 MGP_NODShiLtJ_G0021426.1 mouse_genomes_project 14 77358505 77367663 - MGP_NODShiLtJ_P0039922 Fam216b protein_coding protein_coding MGP_NODShiLtJ_T0039923.1 MGP_NODShiLtJ_G0021426.1 mouse_genomes_project 14 77359855 77367655 - MGP_NODShiLtJ_P0039923 Fam216b protein_coding protein_coding MGP_NODShiLtJ_T0039924.1 MGP_NODShiLtJ_G0021426.1 mouse_genomes_project 14 77360885 77367637 - MGP_NODShiLtJ_P0039924 Fam216b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039775.1 MGP_NODShiLtJ_G0021380.1 mouse_genomes_project 14 69116053 69119194 - MGP_NODShiLtJ_P0039775 Sftpc protein_coding protein_coding MGP_NODShiLtJ_T0002671.1 MGP_NODShiLtJ_G0002544.1 mouse_genomes_project 14 49991271 49991577 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0003497.1 MGP_NODShiLtJ_G0003177.1 mouse_genomes_project 14 52463730 52482201 + Gm20687 antisense antisense MGP_NODShiLtJ_T0037985.1 MGP_NODShiLtJ_G0020816.1 mouse_genomes_project 14 136632 286584 + MGP_NODShiLtJ_P0037985 Flnb protein_coding protein_coding MGP_NODShiLtJ_T0037986.1 MGP_NODShiLtJ_G0020816.1 mouse_genomes_project 14 136827 271369 + MGP_NODShiLtJ_P0037986 Flnb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0002562.1 MGP_NODShiLtJ_G0002456.1 mouse_genomes_project 14 49844800 49845286 + MGP_NODShiLtJ_P0002562 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038654.1 MGP_NODShiLtJ_G0020998.1 mouse_genomes_project 14 28621189 28677447 - MGP_NODShiLtJ_P0038654 A630023A22Rik protein_coding protein_coding MGP_NODShiLtJ_T0039934.1 MGP_NODShiLtJ_G0021433.1 mouse_genomes_project 14 78757741 78766516 - Naa16 protein_coding retained_intron MGP_NODShiLtJ_T0039935.1 MGP_NODShiLtJ_G0021433.1 mouse_genomes_project 14 78758044 78832043 - MGP_NODShiLtJ_P0039935 Naa16 protein_coding protein_coding MGP_NODShiLtJ_T0039936.1 MGP_NODShiLtJ_G0021433.1 mouse_genomes_project 14 78764295 78828358 - MGP_NODShiLtJ_P0039936 Naa16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039937.1 MGP_NODShiLtJ_G0021433.1 mouse_genomes_project 14 78797324 78831957 - MGP_NODShiLtJ_P0039937 Naa16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039938.1 MGP_NODShiLtJ_G0021433.1 mouse_genomes_project 14 78824470 78831955 - Naa16 protein_coding retained_intron MGP_NODShiLtJ_T0039137.1 MGP_NODShiLtJ_G0021152.1 mouse_genomes_project 14 51941535 51966288 - MGP_NODShiLtJ_P0039137 4931414P19Rik protein_coding protein_coding MGP_NODShiLtJ_T0101655.1 MGP_NODShiLtJ_G0039824.1 mouse_genomes_project 14 59253526 59277659 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0040063.1 MGP_NODShiLtJ_G0021480.1 mouse_genomes_project 14 120213009 120219563 - MGP_NODShiLtJ_P0040063 Slitrk6 protein_coding protein_coding MGP_NODShiLtJ_T0000886.1 MGP_NODShiLtJ_G0000815.1 mouse_genomes_project 14 42125628 42143553 - TEC TEC MGP_NODShiLtJ_T0038117.1 MGP_NODShiLtJ_G0020859.1 mouse_genomes_project 14 13467202 13479409 - MGP_NODShiLtJ_P0038117 2700060E02Rik protein_coding protein_coding MGP_NODShiLtJ_T0039560.1 MGP_NODShiLtJ_G0021298.1 mouse_genomes_project 14 61486384 61499090 - MGP_NODShiLtJ_P0039560 Neil2 protein_coding protein_coding MGP_NODShiLtJ_T0039561.1 MGP_NODShiLtJ_G0021298.1 mouse_genomes_project 14 61487172 61497391 - MGP_NODShiLtJ_P0039561 Neil2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003461.1 MGP_NODShiLtJ_G0003151.1 mouse_genomes_project 14 6912911 6944992 + Gm11100 antisense antisense MGP_NODShiLtJ_T0003462.1 MGP_NODShiLtJ_G0003151.1 mouse_genomes_project 14 6927251 6944992 + Gm11100 antisense antisense MGP_NODShiLtJ_T0012858.1 MGP_NODShiLtJ_G0010966.1 mouse_genomes_project 14 12691797 12692209 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038046.1 MGP_NODShiLtJ_G0020838.1 mouse_genomes_project 14 7120320 7129121 - MGP_NODShiLtJ_P0038046 Psmd6 protein_coding protein_coding MGP_NODShiLtJ_T0038047.1 MGP_NODShiLtJ_G0020838.1 mouse_genomes_project 14 7122046 7124687 - Psmd6 protein_coding retained_intron MGP_NODShiLtJ_T0038048.1 MGP_NODShiLtJ_G0020838.1 mouse_genomes_project 14 7124331 7125489 - Psmd6 protein_coding retained_intron MGP_NODShiLtJ_T0038049.1 MGP_NODShiLtJ_G0020838.1 mouse_genomes_project 14 7127769 7129070 - Psmd6 protein_coding retained_intron MGP_NODShiLtJ_T0038892.1 MGP_NODShiLtJ_G0021076.1 mouse_genomes_project 14 46811397 46812378 - MGP_NODShiLtJ_P0038892 Olfr731 protein_coding protein_coding MGP_NODShiLtJ_T0038774.1 MGP_NODShiLtJ_G0021045.1 mouse_genomes_project 14 42514031 42522150 - MGP_NODShiLtJ_P0038774 Bmp4 protein_coding protein_coding MGP_NODShiLtJ_T0038775.1 MGP_NODShiLtJ_G0021045.1 mouse_genomes_project 14 42514217 42522031 - MGP_NODShiLtJ_P0038775 Bmp4 protein_coding protein_coding MGP_NODShiLtJ_T0038776.1 MGP_NODShiLtJ_G0021045.1 mouse_genomes_project 14 42518486 42522016 - Bmp4 protein_coding retained_intron MGP_NODShiLtJ_T0038022.1 MGP_NODShiLtJ_G0020828.1 mouse_genomes_project 14 3919120 3919561 + MGP_NODShiLtJ_P0038022 Rpl21-ps4 protein_coding protein_coding MGP_NODShiLtJ_T0101057.1 MGP_NODShiLtJ_G0039422.1 mouse_genomes_project 14 44504608 44537244 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101058.1 MGP_NODShiLtJ_G0039422.1 mouse_genomes_project 14 44536031 44537037 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0039171.1 MGP_NODShiLtJ_G0021161.1 mouse_genomes_project 14 52087371 52149977 - MGP_NODShiLtJ_P0039171 Slc7a8 protein_coding protein_coding MGP_NODShiLtJ_T0009888.1 MGP_NODShiLtJ_G0008021.1 mouse_genomes_project 14 21427673 21427796 - Gm23633 miRNA miRNA MGP_NODShiLtJ_T0038891.1 MGP_NODShiLtJ_G0021075.1 mouse_genomes_project 14 46754065 46755022 - MGP_NODShiLtJ_P0038891 protein_coding protein_coding MGP_NODShiLtJ_T0039484.1 MGP_NODShiLtJ_G0021265.1 mouse_genomes_project 14 57555698 57596398 - MGP_NODShiLtJ_P0039484 Cdadc1 protein_coding protein_coding MGP_NODShiLtJ_T0039485.1 MGP_NODShiLtJ_G0021265.1 mouse_genomes_project 14 57555698 57596398 - MGP_NODShiLtJ_P0039485 Cdadc1 protein_coding protein_coding MGP_NODShiLtJ_T0039486.1 MGP_NODShiLtJ_G0021265.1 mouse_genomes_project 14 57559300 57596398 - MGP_NODShiLtJ_P0039486 Cdadc1 protein_coding protein_coding MGP_NODShiLtJ_T0039487.1 MGP_NODShiLtJ_G0021265.1 mouse_genomes_project 14 57562538 57596398 - MGP_NODShiLtJ_P0039487 Cdadc1 protein_coding protein_coding MGP_NODShiLtJ_T0039050.1 MGP_NODShiLtJ_G0021130.1 mouse_genomes_project 14 49272478 49287734 + MGP_NODShiLtJ_P0039050 Tox4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039051.1 MGP_NODShiLtJ_G0021130.1 mouse_genomes_project 14 49272492 49286830 + Tox4 protein_coding retained_intron MGP_NODShiLtJ_T0039052.1 MGP_NODShiLtJ_G0021130.1 mouse_genomes_project 14 49272544 49273086 + Tox4 protein_coding retained_intron MGP_NODShiLtJ_T0039053.1 MGP_NODShiLtJ_G0021130.1 mouse_genomes_project 14 49272659 49281441 + Tox4 protein_coding retained_intron MGP_NODShiLtJ_T0039054.1 MGP_NODShiLtJ_G0021130.1 mouse_genomes_project 14 49279823 49281061 + Tox4 protein_coding processed_transcript MGP_NODShiLtJ_T0040125.1 MGP_NODShiLtJ_G0021509.1 mouse_genomes_project 14 134413371 134661762 + MGP_NODShiLtJ_P0040125 Clybl protein_coding protein_coding MGP_NODShiLtJ_T0038418.1 MGP_NODShiLtJ_G0020942.1 mouse_genomes_project 14 25158402 25216035 + MGP_NODShiLtJ_P0038418 Tmem110 protein_coding protein_coding MGP_NODShiLtJ_T0038419.1 MGP_NODShiLtJ_G0020942.1 mouse_genomes_project 14 25158406 25213619 + MGP_NODShiLtJ_P0038419 Tmem110 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038420.1 MGP_NODShiLtJ_G0020942.1 mouse_genomes_project 14 25205489 25214013 + Tmem110 protein_coding processed_transcript MGP_NODShiLtJ_T0038421.1 MGP_NODShiLtJ_G0020942.1 mouse_genomes_project 14 25209555 25211601 + Tmem110 protein_coding retained_intron MGP_NODShiLtJ_T0038422.1 MGP_NODShiLtJ_G0020942.1 mouse_genomes_project 14 25211403 25214049 + Tmem110 protein_coding retained_intron MGP_NODShiLtJ_T0037989.1 MGP_NODShiLtJ_G0020818.1 mouse_genomes_project 14 337838 405051 + MGP_NODShiLtJ_P0037989 Abhd6 protein_coding protein_coding MGP_NODShiLtJ_T0037990.1 MGP_NODShiLtJ_G0020818.1 mouse_genomes_project 14 337902 404358 + MGP_NODShiLtJ_P0037990 Abhd6 protein_coding protein_coding MGP_NODShiLtJ_T0039451.1 MGP_NODShiLtJ_G0021254.1 mouse_genomes_project 14 55568018 55634040 - MGP_NODShiLtJ_P0039451 Zdhhc20 protein_coding protein_coding MGP_NODShiLtJ_T0039452.1 MGP_NODShiLtJ_G0021254.1 mouse_genomes_project 14 55577530 55633958 - MGP_NODShiLtJ_P0039452 Zdhhc20 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006645.1 MGP_NODShiLtJ_G0005484.1 mouse_genomes_project 14 58525183 58641672 + Gm29266 lincRNA lincRNA MGP_NODShiLtJ_T0038050.1 MGP_NODShiLtJ_G0020839.1 mouse_genomes_project 14 7205719 7206742 - MGP_NODShiLtJ_P0038050 Olfr720 protein_coding protein_coding MGP_NODShiLtJ_T0038051.1 MGP_NODShiLtJ_G0020839.1 mouse_genomes_project 14 7206321 7217094 - MGP_NODShiLtJ_P0038051 Olfr720 protein_coding protein_coding MGP_NODShiLtJ_T0006599.1 MGP_NODShiLtJ_G0005452.1 mouse_genomes_project 14 18738451 18749725 - lincRNA lincRNA MGP_NODShiLtJ_T0006600.1 MGP_NODShiLtJ_G0005452.1 mouse_genomes_project 14 18747531 18749718 - lincRNA lincRNA MGP_NODShiLtJ_T0039358.1 MGP_NODShiLtJ_G0021208.1 mouse_genomes_project 14 53234859 53249832 - MGP_NODShiLtJ_P0039358 Adcy4 protein_coding protein_coding MGP_NODShiLtJ_T0039359.1 MGP_NODShiLtJ_G0021208.1 mouse_genomes_project 14 53234894 53249809 - MGP_NODShiLtJ_P0039359 Adcy4 protein_coding protein_coding MGP_NODShiLtJ_T0039734.1 MGP_NODShiLtJ_G0021365.1 mouse_genomes_project 14 68297349 68317492 + MGP_NODShiLtJ_P0039734 Tnfrsf10b protein_coding protein_coding MGP_NODShiLtJ_T0038554.1 MGP_NODShiLtJ_G0020968.1 mouse_genomes_project 14 26111807 26199708 - MGP_NODShiLtJ_P0038554 Ankrd28 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038555.1 MGP_NODShiLtJ_G0020968.1 mouse_genomes_project 14 26113058 26256877 - MGP_NODShiLtJ_P0038555 Ankrd28 protein_coding protein_coding MGP_NODShiLtJ_T0039353.1 MGP_NODShiLtJ_G0021204.1 mouse_genomes_project 14 53204208 53215030 + MGP_NODShiLtJ_P0039353 Nop9 protein_coding protein_coding MGP_NODShiLtJ_T0000893.1 MGP_NODShiLtJ_G0000822.1 mouse_genomes_project 14 52496109 52497148 - TEC TEC MGP_NODShiLtJ_T0038706.1 MGP_NODShiLtJ_G0021018.1 mouse_genomes_project 14 32017170 32029541 - MGP_NODShiLtJ_P0038706 Rgr protein_coding protein_coding MGP_NODShiLtJ_T0002552.1 MGP_NODShiLtJ_G0002448.1 mouse_genomes_project 14 49727359 49727813 + MGP_NODShiLtJ_P0002552 Trav6-2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002553.1 MGP_NODShiLtJ_G0002448.1 mouse_genomes_project 14 49727359 49727813 + MGP_NODShiLtJ_P0002553 Trav6-2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038116.1 MGP_NODShiLtJ_G0020858.1 mouse_genomes_project 14 13409514 13467588 + MGP_NODShiLtJ_P0038116 Nid2 protein_coding protein_coding MGP_NODShiLtJ_T0038558.1 MGP_NODShiLtJ_G0020970.1 mouse_genomes_project 14 26539499 26544543 - MGP_NODShiLtJ_P0038558 Dph3 protein_coding protein_coding MGP_NODShiLtJ_T0038559.1 MGP_NODShiLtJ_G0020970.1 mouse_genomes_project 14 26539502 26544543 - MGP_NODShiLtJ_P0038559 Dph3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038560.1 MGP_NODShiLtJ_G0020970.1 mouse_genomes_project 14 26539502 26544543 - MGP_NODShiLtJ_P0038560 Dph3 protein_coding protein_coding MGP_NODShiLtJ_T0038561.1 MGP_NODShiLtJ_G0020970.1 mouse_genomes_project 14 26541691 26544543 - MGP_NODShiLtJ_P0038561 Dph3 protein_coding protein_coding MGP_NODShiLtJ_T0038562.1 MGP_NODShiLtJ_G0020970.1 mouse_genomes_project 14 26541805 26544626 - Dph3 protein_coding processed_transcript MGP_NODShiLtJ_T0038563.1 MGP_NODShiLtJ_G0020970.1 mouse_genomes_project 14 26541809 26544220 - Dph3 protein_coding retained_intron MGP_NODShiLtJ_T0038564.1 MGP_NODShiLtJ_G0020970.1 mouse_genomes_project 14 26543629 26544543 - MGP_NODShiLtJ_P0038564 Dph3 protein_coding protein_coding MGP_NODShiLtJ_T0038947.1 MGP_NODShiLtJ_G0021108.1 mouse_genomes_project 14 47813612 47814157 - MGP_NODShiLtJ_P0038947 Rnase12 protein_coding protein_coding MGP_NODShiLtJ_T0039841.1 MGP_NODShiLtJ_G0021397.1 mouse_genomes_project 14 72167958 72192745 - MGP_NODShiLtJ_P0039841 Itm2b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039842.1 MGP_NODShiLtJ_G0021397.1 mouse_genomes_project 14 72167960 72192890 - MGP_NODShiLtJ_P0039842 Itm2b protein_coding protein_coding MGP_NODShiLtJ_T0009899.1 MGP_NODShiLtJ_G0008032.1 mouse_genomes_project 14 52378290 52378367 - Mir208b miRNA miRNA MGP_NODShiLtJ_T0012848.1 MGP_NODShiLtJ_G0010956.1 mouse_genomes_project 14 2393754 2394355 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002440.1 MGP_NODShiLtJ_G0002349.1 mouse_genomes_project 14 51469785 51476828 + MGP_NODShiLtJ_P0002440 Trdc TR_C_gene TR_C_gene MGP_NODShiLtJ_T0038648.1 MGP_NODShiLtJ_G0020992.1 mouse_genomes_project 14 28147078 28204440 + MGP_NODShiLtJ_P0038648 Ptpn20 protein_coding protein_coding MGP_NODShiLtJ_T0097941.1 MGP_NODShiLtJ_G0036353.1 mouse_genomes_project 14 74789922 74790014 - Gm24876 rRNA rRNA MGP_NODShiLtJ_T0098876.1 MGP_NODShiLtJ_G0037270.1 mouse_genomes_project 14 132851107 132851191 + Gm25781 snRNA snRNA MGP_NODShiLtJ_T0011264.1 MGP_NODShiLtJ_G0009397.1 mouse_genomes_project 14 54125504 54125611 + Gm22431 misc_RNA misc_RNA MGP_NODShiLtJ_T0039420.1 MGP_NODShiLtJ_G0021247.1 mouse_genomes_project 14 55230011 55250685 + MGP_NODShiLtJ_P0039420 Il17d protein_coding protein_coding MGP_NODShiLtJ_T0038847.1 MGP_NODShiLtJ_G0021061.1 mouse_genomes_project 14 44783314 44851916 + MGP_NODShiLtJ_P0038847 Tmem260 protein_coding protein_coding MGP_NODShiLtJ_T0038848.1 MGP_NODShiLtJ_G0021061.1 mouse_genomes_project 14 44783538 44840466 + Tmem260 protein_coding retained_intron MGP_NODShiLtJ_T0038849.1 MGP_NODShiLtJ_G0021061.1 mouse_genomes_project 14 44783568 44854261 + MGP_NODShiLtJ_P0038849 Tmem260 protein_coding protein_coding MGP_NODShiLtJ_T0038850.1 MGP_NODShiLtJ_G0021061.1 mouse_genomes_project 14 44783579 44851261 + MGP_NODShiLtJ_P0038850 Tmem260 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038851.1 MGP_NODShiLtJ_G0021061.1 mouse_genomes_project 14 44783584 44847504 + Tmem260 protein_coding retained_intron MGP_NODShiLtJ_T0039849.1 MGP_NODShiLtJ_G0021400.1 mouse_genomes_project 14 73591333 73664610 + MGP_NODShiLtJ_P0039849 Htr2a protein_coding protein_coding MGP_NODShiLtJ_T0002502.1 MGP_NODShiLtJ_G0002405.1 mouse_genomes_project 14 51536517 51536576 + MGP_NODShiLtJ_P0002502 Traj11 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039913.1 MGP_NODShiLtJ_G0021421.1 mouse_genomes_project 14 76221166 76305003 + MGP_NODShiLtJ_P0039913 Ccdc122 protein_coding protein_coding MGP_NODShiLtJ_T0039914.1 MGP_NODShiLtJ_G0021421.1 mouse_genomes_project 14 76221176 76305003 + MGP_NODShiLtJ_P0039914 Ccdc122 protein_coding protein_coding MGP_NODShiLtJ_T0039915.1 MGP_NODShiLtJ_G0021421.1 mouse_genomes_project 14 76221258 76304494 + MGP_NODShiLtJ_P0039915 Ccdc122 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039916.1 MGP_NODShiLtJ_G0021421.1 mouse_genomes_project 14 76303773 76305056 + Ccdc122 protein_coding processed_transcript MGP_NODShiLtJ_T0000887.1 MGP_NODShiLtJ_G0000816.1 mouse_genomes_project 14 44004318 44006878 + TEC TEC MGP_NODShiLtJ_T0038946.1 MGP_NODShiLtJ_G0021107.1 mouse_genomes_project 14 47805068 47805781 - MGP_NODShiLtJ_P0038946 Rnase11 protein_coding protein_coding MGP_NODShiLtJ_T0039735.1 MGP_NODShiLtJ_G0021366.1 mouse_genomes_project 14 68318078 68339119 - MGP_NODShiLtJ_P0039735 Rhobtb2 protein_coding protein_coding MGP_NODShiLtJ_T0038979.1 MGP_NODShiLtJ_G0021120.1 mouse_genomes_project 14 48871287 48871901 - MGP_NODShiLtJ_P0038979 Rnase13 protein_coding protein_coding MGP_NODShiLtJ_T0098861.1 MGP_NODShiLtJ_G0037255.1 mouse_genomes_project 14 104317679 104317842 - Gm25831 snRNA snRNA MGP_NODShiLtJ_T0038669.1 MGP_NODShiLtJ_G0021006.1 mouse_genomes_project 14 28951163 28954751 - MGP_NODShiLtJ_P0038669 Fam25c protein_coding protein_coding MGP_NODShiLtJ_T0011255.1 MGP_NODShiLtJ_G0009388.1 mouse_genomes_project 14 11200241 11200567 - Gm24140 misc_RNA misc_RNA MGP_NODShiLtJ_T0040086.1 MGP_NODShiLtJ_G0021493.1 mouse_genomes_project 14 130772483 130817686 + MGP_NODShiLtJ_P0040086 Dnajc3 protein_coding protein_coding MGP_NODShiLtJ_T0038607.1 MGP_NODShiLtJ_G0020978.1 mouse_genomes_project 14 26864220 26876356 - MGP_NODShiLtJ_P0038607 1700024G13Rik protein_coding protein_coding MGP_NODShiLtJ_T0003506.1 MGP_NODShiLtJ_G0003184.1 mouse_genomes_project 14 59372958 59385044 - 1700109G14Rik antisense antisense MGP_NODShiLtJ_T0003507.1 MGP_NODShiLtJ_G0003184.1 mouse_genomes_project 14 59374648 59397990 - 1700109G14Rik antisense antisense MGP_NODShiLtJ_T0003508.1 MGP_NODShiLtJ_G0003184.1 mouse_genomes_project 14 59384534 59385018 - 1700109G14Rik antisense antisense MGP_NODShiLtJ_T0100087.1 MGP_NODShiLtJ_G0038481.1 mouse_genomes_project 14 5157850 5157979 - Gm24578 snoRNA snoRNA MGP_NODShiLtJ_T0039784.1 MGP_NODShiLtJ_G0021385.1 mouse_genomes_project 14 69179895 69197341 - MGP_NODShiLtJ_P0039784 Fam160b2 protein_coding protein_coding MGP_NODShiLtJ_T0039128.1 MGP_NODShiLtJ_G0021149.1 mouse_genomes_project 14 51865431 51876754 - MGP_NODShiLtJ_P0039128 Prmt5 protein_coding protein_coding MGP_NODShiLtJ_T0039129.1 MGP_NODShiLtJ_G0021149.1 mouse_genomes_project 14 51869246 51871702 - MGP_NODShiLtJ_P0039129 Prmt5 protein_coding protein_coding MGP_NODShiLtJ_T0039130.1 MGP_NODShiLtJ_G0021149.1 mouse_genomes_project 14 51869451 51876664 - MGP_NODShiLtJ_P0039130 Prmt5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039131.1 MGP_NODShiLtJ_G0021149.1 mouse_genomes_project 14 51871618 51876622 - Prmt5 protein_coding retained_intron MGP_NODShiLtJ_T0039132.1 MGP_NODShiLtJ_G0021149.1 mouse_genomes_project 14 51872183 51876699 - Prmt5 protein_coding retained_intron MGP_NODShiLtJ_T0039133.1 MGP_NODShiLtJ_G0021149.1 mouse_genomes_project 14 51872836 51874887 - Prmt5 protein_coding processed_transcript MGP_NODShiLtJ_T0039134.1 MGP_NODShiLtJ_G0021149.1 mouse_genomes_project 14 51875379 51876590 - Prmt5 protein_coding processed_transcript MGP_NODShiLtJ_T0003488.1 MGP_NODShiLtJ_G0003170.1 mouse_genomes_project 14 43257101 43278517 - Gm10371 antisense antisense MGP_NODShiLtJ_T0039374.1 MGP_NODShiLtJ_G0021218.1 mouse_genomes_project 14 53558297 53562149 - MGP_NODShiLtJ_P0039374 Mcpt4 protein_coding protein_coding MGP_NODShiLtJ_T0039382.1 MGP_NODShiLtJ_G0021226.1 mouse_genomes_project 14 53745110 53752697 - MGP_NODShiLtJ_P0039382 Gzmf protein_coding protein_coding MGP_NODShiLtJ_T0100104.1 MGP_NODShiLtJ_G0038498.1 mouse_genomes_project 14 52573820 52573952 - Gm23596 snoRNA snoRNA MGP_NODShiLtJ_T0039893.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75529624 75629535 + MGP_NODShiLtJ_P0039893 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039894.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75530250 75629535 + MGP_NODShiLtJ_P0039894 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039895.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75530777 75531307 + Tsc22d1 protein_coding processed_transcript MGP_NODShiLtJ_T0039896.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75533017 75558372 + MGP_NODShiLtJ_P0039896 Tsc22d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039897.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75533311 75555743 + MGP_NODShiLtJ_P0039897 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039898.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75533314 75557084 + MGP_NODShiLtJ_P0039898 Tsc22d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039899.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75533491 75557156 + MGP_NODShiLtJ_P0039899 Tsc22d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039900.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75554509 75557126 + Tsc22d1 protein_coding processed_transcript MGP_NODShiLtJ_T0039901.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75555676 75557126 + Tsc22d1 protein_coding retained_intron MGP_NODShiLtJ_T0039902.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75594635 75628703 + MGP_NODShiLtJ_P0039902 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039903.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75605903 75628771 + MGP_NODShiLtJ_P0039903 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039904.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75606580 75628943 + MGP_NODShiLtJ_P0039904 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039905.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75625986 75629536 + MGP_NODShiLtJ_P0039905 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039906.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75626250 75629538 + MGP_NODShiLtJ_P0039906 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039907.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75626302 75627510 + MGP_NODShiLtJ_P0039907 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039908.1 MGP_NODShiLtJ_G0021418.1 mouse_genomes_project 14 75626870 75628775 + MGP_NODShiLtJ_P0039908 Tsc22d1 protein_coding protein_coding MGP_NODShiLtJ_T0039207.1 MGP_NODShiLtJ_G0021174.1 mouse_genomes_project 14 52422492 52431664 + MGP_NODShiLtJ_P0039207 Ngdn protein_coding protein_coding MGP_NODShiLtJ_T0039724.1 MGP_NODShiLtJ_G0021362.1 mouse_genomes_project 14 68130752 68222449 + MGP_NODShiLtJ_P0039724 Loxl2 protein_coding protein_coding MGP_NODShiLtJ_T0039725.1 MGP_NODShiLtJ_G0021362.1 mouse_genomes_project 14 68131162 68220302 + MGP_NODShiLtJ_P0039725 Loxl2 protein_coding protein_coding MGP_NODShiLtJ_T0012872.1 MGP_NODShiLtJ_G0010980.1 mouse_genomes_project 14 26748322 26749478 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038146.1 MGP_NODShiLtJ_G0020871.1 mouse_genomes_project 14 14208550 14224494 - MGP_NODShiLtJ_P0038146 Mss51 protein_coding protein_coding MGP_NODShiLtJ_T0039349.1 MGP_NODShiLtJ_G0021203.1 mouse_genomes_project 14 53197535 53198176 - Dhrs1 protein_coding retained_intron MGP_NODShiLtJ_T0039350.1 MGP_NODShiLtJ_G0021203.1 mouse_genomes_project 14 53197535 53204115 - Dhrs1 protein_coding retained_intron MGP_NODShiLtJ_T0039351.1 MGP_NODShiLtJ_G0021203.1 mouse_genomes_project 14 53197537 53204206 - MGP_NODShiLtJ_P0039351 Dhrs1 protein_coding protein_coding MGP_NODShiLtJ_T0039352.1 MGP_NODShiLtJ_G0021203.1 mouse_genomes_project 14 53197749 53198660 - Dhrs1 protein_coding retained_intron MGP_NODShiLtJ_T0039193.1 MGP_NODShiLtJ_G0021168.1 mouse_genomes_project 14 52312437 52323174 - MGP_NODShiLtJ_P0039193 Efs protein_coding protein_coding MGP_NODShiLtJ_T0038174.1 MGP_NODShiLtJ_G0020882.1 mouse_genomes_project 14 14601310 14608044 + MGP_NODShiLtJ_P0038174 Plau protein_coding protein_coding MGP_NODShiLtJ_T0006617.1 MGP_NODShiLtJ_G0005463.1 mouse_genomes_project 14 27180093 27181962 + Gm28651 lincRNA lincRNA MGP_NODShiLtJ_T0098864.1 MGP_NODShiLtJ_G0037258.1 mouse_genomes_project 14 105960436 105960592 - Gm25130 snRNA snRNA MGP_NODShiLtJ_T0002471.1 MGP_NODShiLtJ_G0002374.1 mouse_genomes_project 14 51502386 51502447 + MGP_NODShiLtJ_P0002471 Traj44 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039235.1 MGP_NODShiLtJ_G0021181.1 mouse_genomes_project 14 52931929 52949118 + MGP_NODShiLtJ_P0039235 Lrrc16b protein_coding protein_coding MGP_NODShiLtJ_T0039236.1 MGP_NODShiLtJ_G0021181.1 mouse_genomes_project 14 52932080 52948817 + MGP_NODShiLtJ_P0039236 Lrrc16b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039400.1 MGP_NODShiLtJ_G0021235.1 mouse_genomes_project 14 54406472 54426992 - MGP_NODShiLtJ_P0039400 Zmym5 protein_coding protein_coding MGP_NODShiLtJ_T0039401.1 MGP_NODShiLtJ_G0021235.1 mouse_genomes_project 14 54406475 54427255 - MGP_NODShiLtJ_P0039401 Zmym5 protein_coding protein_coding MGP_NODShiLtJ_T0039402.1 MGP_NODShiLtJ_G0021235.1 mouse_genomes_project 14 54408816 54427255 - MGP_NODShiLtJ_P0039402 Zmym5 protein_coding protein_coding MGP_NODShiLtJ_T0097945.1 MGP_NODShiLtJ_G0036357.1 mouse_genomes_project 14 109848749 109848797 + Gm23764 rRNA rRNA MGP_NODShiLtJ_T0101649.1 MGP_NODShiLtJ_G0039818.1 mouse_genomes_project 14 13326315 13331329 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037991.1 MGP_NODShiLtJ_G0020819.1 mouse_genomes_project 14 423624 434790 + MGP_NODShiLtJ_P0037991 protein_coding protein_coding MGP_NODShiLtJ_T0037992.1 MGP_NODShiLtJ_G0020819.1 mouse_genomes_project 14 433007 433484 + MGP_NODShiLtJ_P0037992 protein_coding protein_coding MGP_NODShiLtJ_T0000891.1 MGP_NODShiLtJ_G0000820.1 mouse_genomes_project 14 52265007 52270805 + TEC TEC MGP_NODShiLtJ_T0039909.1 MGP_NODShiLtJ_G0021419.1 mouse_genomes_project 14 75656586 75680461 - MGP_NODShiLtJ_P0039909 Serp2 protein_coding protein_coding MGP_NODShiLtJ_T0101059.1 MGP_NODShiLtJ_G0039423.1 mouse_genomes_project 14 52446018 52450439 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101060.1 MGP_NODShiLtJ_G0039423.1 mouse_genomes_project 14 52449285 52450262 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0002554.1 MGP_NODShiLtJ_G0002449.1 mouse_genomes_project 14 49737423 49737931 + MGP_NODShiLtJ_P0002554 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038616.1 MGP_NODShiLtJ_G0020984.1 mouse_genomes_project 14 27284689 27322940 + MGP_NODShiLtJ_P0038616 1810011H11Rik protein_coding protein_coding MGP_NODShiLtJ_T0038956.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827668 48835769 + MGP_NODShiLtJ_P0038956 Mettl17 protein_coding protein_coding MGP_NODShiLtJ_T0038957.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827702 48835761 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0038958.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827704 48833483 + MGP_NODShiLtJ_P0038958 Mettl17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038959.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827715 48835694 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0038960.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827715 48835694 + MGP_NODShiLtJ_P0038960 Mettl17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038961.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827715 48835694 + MGP_NODShiLtJ_P0038961 Mettl17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038962.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827738 48833201 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0038963.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827744 48828485 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0038964.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827761 48836743 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0038965.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827764 48832797 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0038966.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827772 48835636 + MGP_NODShiLtJ_P0038966 Mettl17 protein_coding protein_coding MGP_NODShiLtJ_T0038967.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827772 48832797 + MGP_NODShiLtJ_P0038967 Mettl17 protein_coding protein_coding MGP_NODShiLtJ_T0038968.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827778 48830086 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0038969.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48827780 48828489 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0038970.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48828228 48834628 + MGP_NODShiLtJ_P0038970 Mettl17 protein_coding protein_coding MGP_NODShiLtJ_T0038971.1 MGP_NODShiLtJ_G0021116.1 mouse_genomes_project 14 48829992 48832912 + Mettl17 protein_coding retained_intron MGP_NODShiLtJ_T0012866.1 MGP_NODShiLtJ_G0010974.1 mouse_genomes_project 14 20295943 20296770 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038738.1 MGP_NODShiLtJ_G0021035.1 mouse_genomes_project 14 40950303 40967786 + MGP_NODShiLtJ_P0038738 Ptger2 protein_coding protein_coding MGP_NODShiLtJ_T0038928.1 MGP_NODShiLtJ_G0021102.1 mouse_genomes_project 14 47680979 47683081 + MGP_NODShiLtJ_P0038928 Apex1 protein_coding protein_coding MGP_NODShiLtJ_T0038929.1 MGP_NODShiLtJ_G0021102.1 mouse_genomes_project 14 47680980 47682493 + MGP_NODShiLtJ_P0038929 Apex1 protein_coding protein_coding MGP_NODShiLtJ_T0038930.1 MGP_NODShiLtJ_G0021102.1 mouse_genomes_project 14 47680989 47681645 + MGP_NODShiLtJ_P0038930 Apex1 protein_coding protein_coding MGP_NODShiLtJ_T0038931.1 MGP_NODShiLtJ_G0021102.1 mouse_genomes_project 14 47681171 47683081 + MGP_NODShiLtJ_P0038931 Apex1 protein_coding protein_coding MGP_NODShiLtJ_T0038694.1 MGP_NODShiLtJ_G0021016.1 mouse_genomes_project 14 30943884 30951853 + MGP_NODShiLtJ_P0038694 4930474N05Rik protein_coding protein_coding MGP_NODShiLtJ_T0038695.1 MGP_NODShiLtJ_G0021016.1 mouse_genomes_project 14 30949945 30955110 + MGP_NODShiLtJ_P0038695 4930474N05Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038523.1 MGP_NODShiLtJ_G0020960.1 mouse_genomes_project 14 25641791 25705011 - MGP_NODShiLtJ_P0038523 Dnah1 protein_coding protein_coding MGP_NODShiLtJ_T0039513.1 MGP_NODShiLtJ_G0021276.1 mouse_genomes_project 14 59209817 59316225 + MGP_NODShiLtJ_P0039513 protein_coding protein_coding MGP_NODShiLtJ_T0039514.1 MGP_NODShiLtJ_G0021276.1 mouse_genomes_project 14 59209851 59273922 + MGP_NODShiLtJ_P0039514 protein_coding protein_coding MGP_NODShiLtJ_T0039515.1 MGP_NODShiLtJ_G0021276.1 mouse_genomes_project 14 59219386 59289753 + MGP_NODShiLtJ_P0039515 protein_coding protein_coding MGP_NODShiLtJ_T0039516.1 MGP_NODShiLtJ_G0021276.1 mouse_genomes_project 14 59247437 59269966 + MGP_NODShiLtJ_P0039516 protein_coding protein_coding MGP_NODShiLtJ_T0039517.1 MGP_NODShiLtJ_G0021276.1 mouse_genomes_project 14 59247652 59289758 + MGP_NODShiLtJ_P0039517 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039518.1 MGP_NODShiLtJ_G0021276.1 mouse_genomes_project 14 59263113 59279176 + protein_coding retained_intron MGP_NODShiLtJ_T0038872.1 MGP_NODShiLtJ_G0021066.1 mouse_genomes_project 14 45647232 45670231 - MGP_NODShiLtJ_P0038872 1700011H14Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038873.1 MGP_NODShiLtJ_G0021066.1 mouse_genomes_project 14 45651084 45670276 - MGP_NODShiLtJ_P0038873 1700011H14Rik protein_coding protein_coding MGP_NODShiLtJ_T0038874.1 MGP_NODShiLtJ_G0021066.1 mouse_genomes_project 14 45651318 45670245 - MGP_NODShiLtJ_P0038874 1700011H14Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038875.1 MGP_NODShiLtJ_G0021066.1 mouse_genomes_project 14 45657535 45670245 - MGP_NODShiLtJ_P0038875 1700011H14Rik protein_coding protein_coding MGP_NODShiLtJ_T0039525.1 MGP_NODShiLtJ_G0021281.1 mouse_genomes_project 14 59633449 59661489 - MGP_NODShiLtJ_P0039525 Spryd7 protein_coding protein_coding MGP_NODShiLtJ_T0039526.1 MGP_NODShiLtJ_G0021281.1 mouse_genomes_project 14 59635761 59661361 - MGP_NODShiLtJ_P0039526 Spryd7 protein_coding protein_coding MGP_NODShiLtJ_T0009883.1 MGP_NODShiLtJ_G0008016.1 mouse_genomes_project 14 15880751 15880864 - Gm27532 miRNA miRNA MGP_NODShiLtJ_T0017265.1 MGP_NODShiLtJ_G0015143.1 mouse_genomes_project 14 65863377 65874420 - 1700120O09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0039497.1 MGP_NODShiLtJ_G0021269.1 mouse_genomes_project 14 58247667 58285324 - MGP_NODShiLtJ_P0039497 Nupl1 protein_coding protein_coding MGP_NODShiLtJ_T0038911.1 MGP_NODShiLtJ_G0021092.1 mouse_genomes_project 14 47339458 47406595 + MGP_NODShiLtJ_P0038911 protein_coding protein_coding MGP_NODShiLtJ_T0011268.1 MGP_NODShiLtJ_G0009401.1 mouse_genomes_project 14 63583641 63583717 - Gm27263 misc_RNA misc_RNA MGP_NODShiLtJ_T0038300.1 MGP_NODShiLtJ_G0020908.1 mouse_genomes_project 14 20095994 20112568 + protein_coding processed_transcript MGP_NODShiLtJ_T0038304.1 MGP_NODShiLtJ_G0020908.1 mouse_genomes_project 14 20100200 20113974 + MGP_NODShiLtJ_P0038304 protein_coding protein_coding MGP_NODShiLtJ_T0038306.1 MGP_NODShiLtJ_G0020908.1 mouse_genomes_project 14 20109441 20112849 + protein_coding retained_intron MGP_NODShiLtJ_T0038307.1 MGP_NODShiLtJ_G0020908.1 mouse_genomes_project 14 20112285 20112765 + protein_coding retained_intron MGP_NODShiLtJ_T0012894.1 MGP_NODShiLtJ_G0011002.1 mouse_genomes_project 14 52205242 52205672 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038945.1 MGP_NODShiLtJ_G0021106.1 mouse_genomes_project 14 47793858 47797271 - MGP_NODShiLtJ_P0038945 Rnase9 protein_coding protein_coding MGP_NODShiLtJ_T0002582.1 MGP_NODShiLtJ_G0002473.1 mouse_genomes_project 14 50406953 50407547 + MGP_NODShiLtJ_P0002582 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038287.1 MGP_NODShiLtJ_G0020904.1 mouse_genomes_project 14 20041824 20056825 - MGP_NODShiLtJ_P0038287 Plac9b protein_coding protein_coding MGP_NODShiLtJ_T0038291.1 MGP_NODShiLtJ_G0020904.1 mouse_genomes_project 14 20042297 20056201 - MGP_NODShiLtJ_P0038291 Plac9b protein_coding protein_coding MGP_NODShiLtJ_T0011260.1 MGP_NODShiLtJ_G0009393.1 mouse_genomes_project 14 30282995 30283163 + Gm27617 misc_RNA misc_RNA MGP_NODShiLtJ_T0002585.1 MGP_NODShiLtJ_G0002476.1 mouse_genomes_project 14 50465510 50465997 + MGP_NODShiLtJ_P0002585 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038671.1 MGP_NODShiLtJ_G0021008.1 mouse_genomes_project 14 28980522 29004709 + MGP_NODShiLtJ_P0038671 Mmrn2 protein_coding protein_coding MGP_NODShiLtJ_T0012876.1 MGP_NODShiLtJ_G0010984.1 mouse_genomes_project 14 40822228 40827192 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012922.1 MGP_NODShiLtJ_G0011030.1 mouse_genomes_project 14 112614169 112614726 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002574.1 MGP_NODShiLtJ_G0002467.1 mouse_genomes_project 14 50209107 50210071 + MGP_NODShiLtJ_P0002574 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0098868.1 MGP_NODShiLtJ_G0037262.1 mouse_genomes_project 14 112572387 112572494 + Gm22290 snRNA snRNA MGP_NODShiLtJ_T0009929.1 MGP_NODShiLtJ_G0008062.1 mouse_genomes_project 14 126244781 126244863 + Mir19a miRNA miRNA MGP_NODShiLtJ_T0003505.1 MGP_NODShiLtJ_G0003183.1 mouse_genomes_project 14 58831876 58843595 - Mipepos antisense antisense MGP_NODShiLtJ_T0002544.1 MGP_NODShiLtJ_G0002442.1 mouse_genomes_project 14 49437668 49438641 + MGP_NODShiLtJ_P0002544 Trav1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002545.1 MGP_NODShiLtJ_G0002442.1 mouse_genomes_project 14 49437707 49438641 + MGP_NODShiLtJ_P0002545 Trav1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0040000.1 MGP_NODShiLtJ_G0021460.1 mouse_genomes_project 14 108505355 108512277 - MGP_NODShiLtJ_P0040000 Commd6 protein_coding protein_coding MGP_NODShiLtJ_T0040001.1 MGP_NODShiLtJ_G0021460.1 mouse_genomes_project 14 108505356 108512062 - MGP_NODShiLtJ_P0040001 Commd6 protein_coding protein_coding MGP_NODShiLtJ_T0040002.1 MGP_NODShiLtJ_G0021460.1 mouse_genomes_project 14 108511646 108512277 - Commd6 protein_coding retained_intron MGP_NODShiLtJ_T0039594.1 MGP_NODShiLtJ_G0021313.1 mouse_genomes_project 14 63012974 63176140 + MGP_NODShiLtJ_P0039594 Kif13b protein_coding protein_coding MGP_NODShiLtJ_T0039595.1 MGP_NODShiLtJ_G0021313.1 mouse_genomes_project 14 63013045 63179464 + MGP_NODShiLtJ_P0039595 Kif13b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003525.1 MGP_NODShiLtJ_G0003197.1 mouse_genomes_project 14 74907658 74909237 - Gm4285 antisense antisense MGP_NODShiLtJ_T0011267.1 MGP_NODShiLtJ_G0009400.1 mouse_genomes_project 14 59797699 59797955 + Gm27928 misc_RNA misc_RNA MGP_NODShiLtJ_T0002485.1 MGP_NODShiLtJ_G0002388.1 mouse_genomes_project 14 51519444 51519504 + MGP_NODShiLtJ_P0002485 Traj29 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0098848.1 MGP_NODShiLtJ_G0037242.1 mouse_genomes_project 14 53138202 53138286 - Gm25887 snRNA snRNA MGP_NODShiLtJ_T0038166.1 MGP_NODShiLtJ_G0020877.1 mouse_genomes_project 14 14449542 14454766 + MGP_NODShiLtJ_P0038166 Fut11 protein_coding protein_coding MGP_NODShiLtJ_T0039951.1 MGP_NODShiLtJ_G0021441.1 mouse_genomes_project 14 79250820 79255358 - MGP_NODShiLtJ_P0039951 Pcdh8 protein_coding protein_coding MGP_NODShiLtJ_T0039952.1 MGP_NODShiLtJ_G0021441.1 mouse_genomes_project 14 79250825 79255358 - MGP_NODShiLtJ_P0039952 Pcdh8 protein_coding protein_coding MGP_NODShiLtJ_T0039953.1 MGP_NODShiLtJ_G0021441.1 mouse_genomes_project 14 79250829 79255358 - Pcdh8 protein_coding retained_intron MGP_NODShiLtJ_T0039954.1 MGP_NODShiLtJ_G0021441.1 mouse_genomes_project 14 79253077 79255250 - Pcdh8 protein_coding processed_transcript MGP_NODShiLtJ_T0038594.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26675424 26722408 + Parg protein_coding retained_intron MGP_NODShiLtJ_T0038595.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26675424 26780514 + MGP_NODShiLtJ_P0038595 Parg protein_coding protein_coding MGP_NODShiLtJ_T0038596.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26675424 26780184 + MGP_NODShiLtJ_P0038596 Parg protein_coding protein_coding MGP_NODShiLtJ_T0038597.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26675424 26778623 + MGP_NODShiLtJ_P0038597 Parg protein_coding protein_coding MGP_NODShiLtJ_T0038598.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26675446 26684839 + MGP_NODShiLtJ_P0038598 Parg protein_coding protein_coding MGP_NODShiLtJ_T0038599.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26675507 26780184 + MGP_NODShiLtJ_P0038599 Parg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038600.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26675669 26693914 + MGP_NODShiLtJ_P0038600 Parg protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038601.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26675911 26684790 + Parg protein_coding processed_transcript MGP_NODShiLtJ_T0038602.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26690004 26721573 + MGP_NODShiLtJ_P0038602 Parg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038603.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26721480 26743384 + Parg protein_coding processed_transcript MGP_NODShiLtJ_T0038604.1 MGP_NODShiLtJ_G0020976.1 mouse_genomes_project 14 26757436 26779308 + Parg protein_coding processed_transcript MGP_NODShiLtJ_T0000904.1 MGP_NODShiLtJ_G0000833.1 mouse_genomes_project 14 88935853 88936228 - TEC TEC MGP_NODShiLtJ_T0006676.1 MGP_NODShiLtJ_G0005508.1 mouse_genomes_project 14 131702466 131704807 + 1700006F04Rik lincRNA lincRNA MGP_NODShiLtJ_T0039672.1 MGP_NODShiLtJ_G0021341.1 mouse_genomes_project 14 65506086 65530907 - MGP_NODShiLtJ_P0039672 Bnip3l protein_coding protein_coding MGP_NODShiLtJ_T0039673.1 MGP_NODShiLtJ_G0021341.1 mouse_genomes_project 14 65506086 65530886 - MGP_NODShiLtJ_P0039673 Bnip3l protein_coding protein_coding MGP_NODShiLtJ_T0039674.1 MGP_NODShiLtJ_G0021341.1 mouse_genomes_project 14 65506096 65530814 - MGP_NODShiLtJ_P0039674 Bnip3l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039675.1 MGP_NODShiLtJ_G0021341.1 mouse_genomes_project 14 65508120 65511176 - Bnip3l protein_coding processed_transcript MGP_NODShiLtJ_T0039676.1 MGP_NODShiLtJ_G0021341.1 mouse_genomes_project 14 65510164 65521237 - Bnip3l protein_coding processed_transcript MGP_NODShiLtJ_T0039677.1 MGP_NODShiLtJ_G0021341.1 mouse_genomes_project 14 65510759 65521840 - Bnip3l protein_coding processed_transcript MGP_NODShiLtJ_T0039678.1 MGP_NODShiLtJ_G0021341.1 mouse_genomes_project 14 65510768 65521060 - Bnip3l protein_coding processed_transcript MGP_NODShiLtJ_T0039679.1 MGP_NODShiLtJ_G0021341.1 mouse_genomes_project 14 65514882 65520992 - Bnip3l protein_coding retained_intron MGP_NODShiLtJ_T0098871.1 MGP_NODShiLtJ_G0037265.1 mouse_genomes_project 14 119744326 119744433 - Gm23242 snRNA snRNA MGP_NODShiLtJ_T0002579.1 MGP_NODShiLtJ_G0002471.1 mouse_genomes_project 14 50370302 50821208 + MGP_NODShiLtJ_P0002579 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002580.1 MGP_NODShiLtJ_G0002471.1 mouse_genomes_project 14 50370557 50821208 + MGP_NODShiLtJ_P0002580 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0040126.1 MGP_NODShiLtJ_G0021510.1 mouse_genomes_project 14 134695357 134714331 - MGP_NODShiLtJ_P0040126 Gm5089 protein_coding protein_coding MGP_NODShiLtJ_T0038908.1 MGP_NODShiLtJ_G0021089.1 mouse_genomes_project 14 47304499 47305604 + MGP_NODShiLtJ_P0038908 Olfr744 protein_coding protein_coding MGP_NODShiLtJ_T0100122.1 MGP_NODShiLtJ_G0038516.1 mouse_genomes_project 14 89103370 89103513 + Gm23278 snoRNA snoRNA MGP_NODShiLtJ_T0009911.1 MGP_NODShiLtJ_G0008044.1 mouse_genomes_project 14 65811255 65811350 - Gm23178 miRNA miRNA MGP_NODShiLtJ_T0100092.1 MGP_NODShiLtJ_G0038486.1 mouse_genomes_project 14 25379308 25379388 - Snord69 snoRNA snoRNA MGP_NODShiLtJ_T0002499.1 MGP_NODShiLtJ_G0002402.1 mouse_genomes_project 14 51533800 51533860 + MGP_NODShiLtJ_P0002499 Traj15 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002584.1 MGP_NODShiLtJ_G0002475.1 mouse_genomes_project 14 50465489 50465997 + MGP_NODShiLtJ_P0002584 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038268.1 MGP_NODShiLtJ_G0020898.1 mouse_genomes_project 14 18616939 18621689 + MGP_NODShiLtJ_P0038268 Rps24 protein_coding protein_coding MGP_NODShiLtJ_T0038269.1 MGP_NODShiLtJ_G0020898.1 mouse_genomes_project 14 18616939 18622399 + MGP_NODShiLtJ_P0038269 Rps24 protein_coding protein_coding MGP_NODShiLtJ_T0040102.1 MGP_NODShiLtJ_G0021496.1 mouse_genomes_project 14 132004951 132030826 - MGP_NODShiLtJ_P0040102 Oxgr1 protein_coding protein_coding MGP_NODShiLtJ_T0098845.1 MGP_NODShiLtJ_G0037239.1 mouse_genomes_project 14 47666384 47666488 + Gm24689 snRNA snRNA MGP_NODShiLtJ_T0009901.1 MGP_NODShiLtJ_G0008034.1 mouse_genomes_project 14 55532035 55532099 + Mir3077 miRNA miRNA MGP_NODShiLtJ_T0039101.1 MGP_NODShiLtJ_G0021142.1 mouse_genomes_project 14 51615534 51616565 - MGP_NODShiLtJ_P0039101 Olfr49 protein_coding protein_coding MGP_NODShiLtJ_T0012897.1 MGP_NODShiLtJ_G0011005.1 mouse_genomes_project 14 55133141 55133934 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038896.1 MGP_NODShiLtJ_G0021080.1 mouse_genomes_project 14 46945272 46946223 - Olfr735 protein_coding transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0038897.1 MGP_NODShiLtJ_G0021080.1 mouse_genomes_project 14 46945272 46946337 - MGP_NODShiLtJ_P0038897 Olfr735 protein_coding protein_coding MGP_NODShiLtJ_T0038898.1 MGP_NODShiLtJ_G0021080.1 mouse_genomes_project 14 46945675 46951144 - Olfr735 protein_coding processed_transcript MGP_NODShiLtJ_T0039247.1 MGP_NODShiLtJ_G0021184.1 mouse_genomes_project 14 52983792 52993456 + MGP_NODShiLtJ_P0039247 Pck2 protein_coding protein_coding MGP_NODShiLtJ_T0097939.1 MGP_NODShiLtJ_G0036351.1 mouse_genomes_project 14 65069071 65069161 - Gm23899 rRNA rRNA MGP_NODShiLtJ_T0038663.1 MGP_NODShiLtJ_G0021004.1 mouse_genomes_project 14 28820402 28862719 - MGP_NODShiLtJ_P0038663 Fam35a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040062.1 MGP_NODShiLtJ_G0021479.1 mouse_genomes_project 14 117587242 117591485 - MGP_NODShiLtJ_P0040062 Slitrk1 protein_coding protein_coding MGP_NODShiLtJ_T0002480.1 MGP_NODShiLtJ_G0002383.1 mouse_genomes_project 14 51513335 51513393 + MGP_NODShiLtJ_P0002480 Traj34 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0000889.1 MGP_NODShiLtJ_G0000818.1 mouse_genomes_project 14 49249069 49255222 + TEC TEC MGP_NODShiLtJ_T0039710.1 MGP_NODShiLtJ_G0021356.1 mouse_genomes_project 14 67973530 68020011 - MGP_NODShiLtJ_P0039710 Slc25a37 protein_coding protein_coding MGP_NODShiLtJ_T0039711.1 MGP_NODShiLtJ_G0021356.1 mouse_genomes_project 14 67973533 68020011 - Slc25a37 protein_coding retained_intron MGP_NODShiLtJ_T0039712.1 MGP_NODShiLtJ_G0021356.1 mouse_genomes_project 14 67975858 68019866 - MGP_NODShiLtJ_P0039712 Slc25a37 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003524.1 MGP_NODShiLtJ_G0003196.1 mouse_genomes_project 14 74204223 74207475 - Gm15629 antisense antisense MGP_NODShiLtJ_T0039620.1 MGP_NODShiLtJ_G0021324.1 mouse_genomes_project 14 64222061 64236206 + MGP_NODShiLtJ_P0039620 Pbk protein_coding protein_coding MGP_NODShiLtJ_T0039621.1 MGP_NODShiLtJ_G0021324.1 mouse_genomes_project 14 64222161 64229332 + Pbk protein_coding processed_transcript MGP_NODShiLtJ_T0039622.1 MGP_NODShiLtJ_G0021324.1 mouse_genomes_project 14 64222456 64230098 + MGP_NODShiLtJ_P0039622 Pbk protein_coding protein_coding MGP_NODShiLtJ_T0039737.1 MGP_NODShiLtJ_G0021368.1 mouse_genomes_project 14 68644415 68647128 + MGP_NODShiLtJ_P0039737 Egr3 protein_coding protein_coding MGP_NODShiLtJ_T0009885.1 MGP_NODShiLtJ_G0008018.1 mouse_genomes_project 14 19666707 19666792 + Mir3075 miRNA miRNA MGP_NODShiLtJ_T0006668.1 MGP_NODShiLtJ_G0005501.1 mouse_genomes_project 14 110045851 110051721 + Gm26778 lincRNA lincRNA MGP_NODShiLtJ_T0097935.1 MGP_NODShiLtJ_G0036347.1 mouse_genomes_project 14 5252763 5252873 - n-R5s45 rRNA rRNA MGP_NODShiLtJ_T0012920.1 MGP_NODShiLtJ_G0011028.1 mouse_genomes_project 14 106471748 106472045 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002453.1 MGP_NODShiLtJ_G0002360.1 mouse_genomes_project 14 51455962 51456013 + MGP_NODShiLtJ_P0002453 Trdj1 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0009910.1 MGP_NODShiLtJ_G0008043.1 mouse_genomes_project 14 65598781 65598899 + Gm27647 miRNA miRNA MGP_NODShiLtJ_T0038804.1 MGP_NODShiLtJ_G0021055.1 mouse_genomes_project 14 43582631 43598492 + MGP_NODShiLtJ_P0038804 Lgals3 protein_coding protein_coding MGP_NODShiLtJ_T0038805.1 MGP_NODShiLtJ_G0021055.1 mouse_genomes_project 14 43590017 43604212 + MGP_NODShiLtJ_P0038805 Lgals3 protein_coding protein_coding MGP_NODShiLtJ_T0038806.1 MGP_NODShiLtJ_G0021055.1 mouse_genomes_project 14 43590103 43603848 + MGP_NODShiLtJ_P0038806 Lgals3 protein_coding protein_coding MGP_NODShiLtJ_T0038807.1 MGP_NODShiLtJ_G0021055.1 mouse_genomes_project 14 43590120 43598391 + MGP_NODShiLtJ_P0038807 Lgals3 protein_coding protein_coding MGP_NODShiLtJ_T0038808.1 MGP_NODShiLtJ_G0021055.1 mouse_genomes_project 14 43590178 43603843 + MGP_NODShiLtJ_P0038808 Lgals3 protein_coding protein_coding MGP_NODShiLtJ_T0009900.1 MGP_NODShiLtJ_G0008033.1 mouse_genomes_project 14 53584223 53584291 - Mir6949 miRNA miRNA MGP_NODShiLtJ_T0040070.1 MGP_NODShiLtJ_G0021484.1 mouse_genomes_project 14 128550187 129703930 + MGP_NODShiLtJ_P0040070 Gpc6 protein_coding protein_coding MGP_NODShiLtJ_T0040071.1 MGP_NODShiLtJ_G0021484.1 mouse_genomes_project 14 128550205 129327950 + Gpc6 protein_coding retained_intron MGP_NODShiLtJ_T0040072.1 MGP_NODShiLtJ_G0021484.1 mouse_genomes_project 14 128550320 129700091 + MGP_NODShiLtJ_P0040072 Gpc6 protein_coding protein_coding MGP_NODShiLtJ_T0040073.1 MGP_NODShiLtJ_G0021484.1 mouse_genomes_project 14 128550421 129698953 + MGP_NODShiLtJ_P0040073 Gpc6 protein_coding protein_coding MGP_NODShiLtJ_T0038788.1 MGP_NODShiLtJ_G0021050.1 mouse_genomes_project 14 43028779 43262549 + MGP_NODShiLtJ_P0038788 Samd4 protein_coding protein_coding MGP_NODShiLtJ_T0038789.1 MGP_NODShiLtJ_G0021050.1 mouse_genomes_project 14 43028890 43267092 + MGP_NODShiLtJ_P0038789 Samd4 protein_coding protein_coding MGP_NODShiLtJ_T0038790.1 MGP_NODShiLtJ_G0021050.1 mouse_genomes_project 14 43029431 43030508 + Samd4 protein_coding processed_transcript MGP_NODShiLtJ_T0038791.1 MGP_NODShiLtJ_G0021050.1 mouse_genomes_project 14 43030055 43267086 + MGP_NODShiLtJ_P0038791 Samd4 protein_coding protein_coding MGP_NODShiLtJ_T0038792.1 MGP_NODShiLtJ_G0021050.1 mouse_genomes_project 14 43156471 43158367 + Samd4 protein_coding processed_transcript MGP_NODShiLtJ_T0038793.1 MGP_NODShiLtJ_G0021050.1 mouse_genomes_project 14 43156478 43261040 + MGP_NODShiLtJ_P0038793 Samd4 protein_coding protein_coding MGP_NODShiLtJ_T0038794.1 MGP_NODShiLtJ_G0021050.1 mouse_genomes_project 14 43173126 43260865 + MGP_NODShiLtJ_P0038794 Samd4 protein_coding protein_coding MGP_NODShiLtJ_T0038795.1 MGP_NODShiLtJ_G0021050.1 mouse_genomes_project 14 43246565 43248521 + Samd4 protein_coding processed_transcript MGP_NODShiLtJ_T0038619.1 MGP_NODShiLtJ_G0020987.1 mouse_genomes_project 14 27471281 27717027 - MGP_NODShiLtJ_P0038619 Wdfy4 protein_coding protein_coding MGP_NODShiLtJ_T0038620.1 MGP_NODShiLtJ_G0020987.1 mouse_genomes_project 14 27471304 27717027 - MGP_NODShiLtJ_P0038620 Wdfy4 protein_coding protein_coding MGP_NODShiLtJ_T0038627.1 MGP_NODShiLtJ_G0020987.1 mouse_genomes_project 14 27534167 27693278 - MGP_NODShiLtJ_P0038627 Wdfy4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038628.1 MGP_NODShiLtJ_G0020987.1 mouse_genomes_project 14 27538419 27543473 - MGP_NODShiLtJ_P0038628 Wdfy4 protein_coding protein_coding MGP_NODShiLtJ_T0038629.1 MGP_NODShiLtJ_G0020987.1 mouse_genomes_project 14 27693083 27717469 - MGP_NODShiLtJ_P0038629 Wdfy4 protein_coding protein_coding MGP_NODShiLtJ_T0002468.1 MGP_NODShiLtJ_G0002371.1 mouse_genomes_project 14 51500491 51500548 + MGP_NODShiLtJ_P0002468 Traj47 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039356.1 MGP_NODShiLtJ_G0021206.1 mouse_genomes_project 14 53223515 53225317 + MGP_NODShiLtJ_P0039356 Ltb4r2 protein_coding protein_coding MGP_NODShiLtJ_T0000900.1 MGP_NODShiLtJ_G0000829.1 mouse_genomes_project 14 68012397 68017041 - TEC TEC MGP_NODShiLtJ_T0009925.1 MGP_NODShiLtJ_G0008058.1 mouse_genomes_project 14 113182959 113183048 + Gm22406 miRNA miRNA MGP_NODShiLtJ_T0038513.1 MGP_NODShiLtJ_G0020957.1 mouse_genomes_project 14 25598082 25610450 + MGP_NODShiLtJ_P0038513 Sema3g protein_coding protein_coding MGP_NODShiLtJ_T0038160.1 MGP_NODShiLtJ_G0020874.1 mouse_genomes_project 14 14401026 14410472 - MGP_NODShiLtJ_P0038160 Myoz1 protein_coding protein_coding MGP_NODShiLtJ_T0038728.1 MGP_NODShiLtJ_G0021028.1 mouse_genomes_project 14 36932205 36945355 - MGP_NODShiLtJ_P0038728 Dydc2 protein_coding protein_coding MGP_NODShiLtJ_T0003500.1 MGP_NODShiLtJ_G0003180.1 mouse_genomes_project 14 54202823 54217111 - Gm16573 antisense antisense MGP_NODShiLtJ_T0003501.1 MGP_NODShiLtJ_G0003180.1 mouse_genomes_project 14 54206350 54217127 - Gm16573 antisense antisense MGP_NODShiLtJ_T0003502.1 MGP_NODShiLtJ_G0003180.1 mouse_genomes_project 14 54213076 54217127 - Gm16573 antisense antisense MGP_NODShiLtJ_T0038115.1 MGP_NODShiLtJ_G0020857.1 mouse_genomes_project 14 13046420 13054629 - MGP_NODShiLtJ_P0038115 Gm9637 protein_coding protein_coding MGP_NODShiLtJ_T0040087.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130820629 130846031 - Uggt2 protein_coding retained_intron MGP_NODShiLtJ_T0040088.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130820629 130958908 - MGP_NODShiLtJ_P0040088 Uggt2 protein_coding protein_coding MGP_NODShiLtJ_T0040089.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130821782 130845791 - Uggt2 protein_coding retained_intron MGP_NODShiLtJ_T0040090.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130822007 130845312 - Uggt2 protein_coding processed_transcript MGP_NODShiLtJ_T0040091.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130822404 130845965 - Uggt2 protein_coding retained_intron MGP_NODShiLtJ_T0040092.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130835867 130847629 - Uggt2 protein_coding processed_transcript MGP_NODShiLtJ_T0040093.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130839528 130846737 - Uggt2 protein_coding retained_intron MGP_NODShiLtJ_T0040094.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130839694 130846124 - Uggt2 protein_coding processed_transcript MGP_NODShiLtJ_T0040095.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130840644 130858348 - MGP_NODShiLtJ_P0040095 Uggt2 protein_coding protein_coding MGP_NODShiLtJ_T0040096.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130852930 130902724 - MGP_NODShiLtJ_P0040096 Uggt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040097.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130852930 130876881 - MGP_NODShiLtJ_P0040097 Uggt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040098.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130877008 130880624 - Uggt2 protein_coding retained_intron MGP_NODShiLtJ_T0040099.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130888814 130894207 - Uggt2 protein_coding retained_intron MGP_NODShiLtJ_T0040100.1 MGP_NODShiLtJ_G0021494.1 mouse_genomes_project 14 130903683 130958908 - Uggt2 protein_coding retained_intron MGP_NODShiLtJ_T0038951.1 MGP_NODShiLtJ_G0021111.1 mouse_genomes_project 14 47899272 47902488 + MGP_NODShiLtJ_P0038951 Eddm3b protein_coding protein_coding MGP_NODShiLtJ_T0006648.1 MGP_NODShiLtJ_G0005487.1 mouse_genomes_project 14 59780296 59798625 + Gm27017 lincRNA lincRNA MGP_NODShiLtJ_T0098860.1 MGP_NODShiLtJ_G0037254.1 mouse_genomes_project 14 97352139 97352301 - Gm23509 snRNA snRNA MGP_NODShiLtJ_T0098855.1 MGP_NODShiLtJ_G0037249.1 mouse_genomes_project 14 70848289 70848423 + Gm23735 snRNA snRNA MGP_NODShiLtJ_T0038366.1 MGP_NODShiLtJ_G0020929.1 mouse_genomes_project 14 22641292 22644511 + Wnt5a protein_coding processed_transcript MGP_NODShiLtJ_T0038367.1 MGP_NODShiLtJ_G0020929.1 mouse_genomes_project 14 22641501 22663797 + MGP_NODShiLtJ_P0038367 Wnt5a protein_coding protein_coding MGP_NODShiLtJ_T0038368.1 MGP_NODShiLtJ_G0020929.1 mouse_genomes_project 14 22646009 22648410 + Wnt5a protein_coding processed_transcript MGP_NODShiLtJ_T0038369.1 MGP_NODShiLtJ_G0020929.1 mouse_genomes_project 14 22647874 22659841 + Wnt5a protein_coding processed_transcript MGP_NODShiLtJ_T0038370.1 MGP_NODShiLtJ_G0020929.1 mouse_genomes_project 14 22647935 22648392 + Wnt5a protein_coding processed_transcript MGP_NODShiLtJ_T0003514.1 MGP_NODShiLtJ_G0003190.1 mouse_genomes_project 14 67889640 67898019 - 1700092C10Rik antisense antisense MGP_NODShiLtJ_T0002571.1 MGP_NODShiLtJ_G0002464.1 mouse_genomes_project 14 50130930 50131417 + MGP_NODShiLtJ_P0002571 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038889.1 MGP_NODShiLtJ_G0021073.1 mouse_genomes_project 14 46686197 46687133 - MGP_NODShiLtJ_P0038889 Olfr728 protein_coding protein_coding MGP_NODShiLtJ_T0098863.1 MGP_NODShiLtJ_G0037257.1 mouse_genomes_project 14 105949340 105949462 - Gm22984 snRNA snRNA MGP_NODShiLtJ_T0038736.1 MGP_NODShiLtJ_G0021033.1 mouse_genomes_project 14 37058196 37074577 - MGP_NODShiLtJ_P0038736 Sftpd protein_coding protein_coding MGP_NODShiLtJ_T0039583.1 MGP_NODShiLtJ_G0021306.1 mouse_genomes_project 14 62275334 62282393 + MGP_NODShiLtJ_P0039583 Sox7 protein_coding protein_coding MGP_NODShiLtJ_T0038797.1 MGP_NODShiLtJ_G0021052.1 mouse_genomes_project 14 43429694 43475207 - MGP_NODShiLtJ_P0038797 Wdhd1 protein_coding protein_coding MGP_NODShiLtJ_T0038798.1 MGP_NODShiLtJ_G0021052.1 mouse_genomes_project 14 43429694 43475165 - MGP_NODShiLtJ_P0038798 Wdhd1 protein_coding protein_coding MGP_NODShiLtJ_T0038799.1 MGP_NODShiLtJ_G0021052.1 mouse_genomes_project 14 43429695 43475232 - MGP_NODShiLtJ_P0038799 Wdhd1 protein_coding protein_coding MGP_NODShiLtJ_T0038800.1 MGP_NODShiLtJ_G0021052.1 mouse_genomes_project 14 43447145 43475207 - MGP_NODShiLtJ_P0038800 Wdhd1 protein_coding protein_coding MGP_NODShiLtJ_T0038801.1 MGP_NODShiLtJ_G0021052.1 mouse_genomes_project 14 43464129 43475182 - Wdhd1 protein_coding retained_intron MGP_NODShiLtJ_T0039249.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004368 53014439 + MGP_NODShiLtJ_P0039249 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039250.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004380 53005805 + MGP_NODShiLtJ_P0039250 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039251.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004383 53005119 + Dcaf11 protein_coding processed_transcript MGP_NODShiLtJ_T0039252.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004387 53007297 + MGP_NODShiLtJ_P0039252 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039253.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004424 53014438 + MGP_NODShiLtJ_P0039253 Dcaf11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039254.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004483 53013909 + Dcaf11 protein_coding retained_intron MGP_NODShiLtJ_T0039255.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004844 53005463 + Dcaf11 protein_coding processed_transcript MGP_NODShiLtJ_T0039256.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004874 53014305 + MGP_NODShiLtJ_P0039256 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039257.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004880 53005807 + MGP_NODShiLtJ_P0039257 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039258.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004895 53008767 + MGP_NODShiLtJ_P0039258 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039259.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53004896 53014435 + MGP_NODShiLtJ_P0039259 Dcaf11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039260.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53005292 53014436 + MGP_NODShiLtJ_P0039260 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039261.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53005334 53008144 + MGP_NODShiLtJ_P0039261 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039262.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53005347 53014438 + Dcaf11 protein_coding retained_intron MGP_NODShiLtJ_T0039263.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53005430 53014305 + MGP_NODShiLtJ_P0039263 Dcaf11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039264.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53005430 53014305 + MGP_NODShiLtJ_P0039264 Dcaf11 protein_coding protein_coding MGP_NODShiLtJ_T0039265.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53008754 53009207 + Dcaf11 protein_coding retained_intron MGP_NODShiLtJ_T0039266.1 MGP_NODShiLtJ_G0021186.1 mouse_genomes_project 14 53010225 53013763 + Dcaf11 protein_coding processed_transcript MGP_NODShiLtJ_T0038007.1 MGP_NODShiLtJ_G0020824.1 mouse_genomes_project 14 647495 661031 - MGP_NODShiLtJ_P0038007 Fam107a protein_coding protein_coding MGP_NODShiLtJ_T0038008.1 MGP_NODShiLtJ_G0020824.1 mouse_genomes_project 14 647495 661033 - MGP_NODShiLtJ_P0038008 Fam107a protein_coding protein_coding MGP_NODShiLtJ_T0038009.1 MGP_NODShiLtJ_G0020824.1 mouse_genomes_project 14 648787 669302 - MGP_NODShiLtJ_P0038009 Fam107a protein_coding protein_coding MGP_NODShiLtJ_T0038010.1 MGP_NODShiLtJ_G0020824.1 mouse_genomes_project 14 650770 661049 - MGP_NODShiLtJ_P0038010 Fam107a protein_coding protein_coding MGP_NODShiLtJ_T0039708.1 MGP_NODShiLtJ_G0021354.1 mouse_genomes_project 14 67897963 67901686 + MGP_NODShiLtJ_P0039708 Nkx2-6 protein_coding protein_coding MGP_NODShiLtJ_T0040020.1 MGP_NODShiLtJ_G0021464.1 mouse_genomes_project 14 110044212 110051830 - MGP_NODShiLtJ_P0040020 Kctd12 protein_coding protein_coding MGP_NODShiLtJ_T0040021.1 MGP_NODShiLtJ_G0021464.1 mouse_genomes_project 14 110045168 110050744 - Kctd12 protein_coding processed_transcript MGP_NODShiLtJ_T0038164.1 MGP_NODShiLtJ_G0020876.1 mouse_genomes_project 14 14428978 14449425 + MGP_NODShiLtJ_P0038164 Sec24c protein_coding protein_coding MGP_NODShiLtJ_T0038165.1 MGP_NODShiLtJ_G0020876.1 mouse_genomes_project 14 14428981 14449432 + MGP_NODShiLtJ_P0038165 Sec24c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101650.1 MGP_NODShiLtJ_G0039819.1 mouse_genomes_project 14 20030649 20038152 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0038721.1 MGP_NODShiLtJ_G0021027.1 mouse_genomes_project 14 36874277 36894379 - MGP_NODShiLtJ_P0038721 Fam213a protein_coding protein_coding MGP_NODShiLtJ_T0038722.1 MGP_NODShiLtJ_G0021027.1 mouse_genomes_project 14 36875077 36885038 - MGP_NODShiLtJ_P0038722 Fam213a protein_coding protein_coding MGP_NODShiLtJ_T0038723.1 MGP_NODShiLtJ_G0021027.1 mouse_genomes_project 14 36878281 36885482 - MGP_NODShiLtJ_P0038723 Fam213a protein_coding protein_coding MGP_NODShiLtJ_T0038724.1 MGP_NODShiLtJ_G0021027.1 mouse_genomes_project 14 36879389 36883609 - Fam213a protein_coding retained_intron MGP_NODShiLtJ_T0038725.1 MGP_NODShiLtJ_G0021027.1 mouse_genomes_project 14 36879427 36887481 - MGP_NODShiLtJ_P0038725 Fam213a protein_coding protein_coding MGP_NODShiLtJ_T0038726.1 MGP_NODShiLtJ_G0021027.1 mouse_genomes_project 14 36879469 36894278 - MGP_NODShiLtJ_P0038726 Fam213a protein_coding protein_coding MGP_NODShiLtJ_T0038727.1 MGP_NODShiLtJ_G0021027.1 mouse_genomes_project 14 36884545 36887425 - MGP_NODShiLtJ_P0038727 Fam213a protein_coding protein_coding MGP_NODShiLtJ_T0002568.1 MGP_NODShiLtJ_G0002461.1 mouse_genomes_project 14 50019364 50031813 + MGP_NODShiLtJ_P0002568 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039596.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63183407 63326898 - MGP_NODShiLtJ_P0039596 Hmbox1 protein_coding protein_coding MGP_NODShiLtJ_T0039597.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63186434 63194073 - Hmbox1 protein_coding processed_transcript MGP_NODShiLtJ_T0039598.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63193994 63326895 - MGP_NODShiLtJ_P0039598 Hmbox1 protein_coding protein_coding MGP_NODShiLtJ_T0039599.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63193994 63326919 - MGP_NODShiLtJ_P0039599 Hmbox1 protein_coding protein_coding MGP_NODShiLtJ_T0039600.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63194590 63326680 - MGP_NODShiLtJ_P0039600 Hmbox1 protein_coding protein_coding MGP_NODShiLtJ_T0039601.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63194945 63279801 - MGP_NODShiLtJ_P0039601 Hmbox1 protein_coding protein_coding MGP_NODShiLtJ_T0039602.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63196835 63326904 - MGP_NODShiLtJ_P0039602 Hmbox1 protein_coding protein_coding MGP_NODShiLtJ_T0039603.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63197082 63326895 - MGP_NODShiLtJ_P0039603 Hmbox1 protein_coding protein_coding MGP_NODShiLtJ_T0039604.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63197115 63326895 - MGP_NODShiLtJ_P0039604 Hmbox1 protein_coding protein_coding MGP_NODShiLtJ_T0039605.1 MGP_NODShiLtJ_G0021314.1 mouse_genomes_project 14 63259178 63326895 - Hmbox1 protein_coding retained_intron MGP_NODShiLtJ_T0039143.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52002513 52053460 - MGP_NODShiLtJ_P0039143 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039144.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52002513 52013938 - MGP_NODShiLtJ_P0039144 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039145.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52002513 52014017 - MGP_NODShiLtJ_P0039145 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039146.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52002513 52013989 - MGP_NODShiLtJ_P0039146 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039147.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52002514 52014023 - MGP_NODShiLtJ_P0039147 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039148.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52002514 52053145 - MGP_NODShiLtJ_P0039148 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039149.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52002519 52014004 - MGP_NODShiLtJ_P0039149 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039150.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52003081 52053460 - MGP_NODShiLtJ_P0039150 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039151.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52003081 52013560 - MGP_NODShiLtJ_P0039151 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039152.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52003255 52004891 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039153.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52003641 52004565 - MGP_NODShiLtJ_P0039153 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039154.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52004609 52006208 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039155.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52005081 52008891 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039156.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52005341 52006389 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039157.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52005555 52010579 - Acin1 protein_coding processed_transcript MGP_NODShiLtJ_T0039158.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52005647 52008655 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039159.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52006083 52014007 - MGP_NODShiLtJ_P0039159 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039160.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52006897 52010213 - Acin1 protein_coding processed_transcript MGP_NODShiLtJ_T0039161.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52011105 52014003 - Acin1 protein_coding processed_transcript MGP_NODShiLtJ_T0039162.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52011158 52014003 - Acin1 protein_coding processed_transcript MGP_NODShiLtJ_T0039163.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52011720 52023969 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039164.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52011834 52014013 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039165.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52022057 52024936 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039166.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52025384 52052589 - MGP_NODShiLtJ_P0039166 Acin1 protein_coding protein_coding MGP_NODShiLtJ_T0039167.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52041806 52053162 - Acin1 protein_coding processed_transcript MGP_NODShiLtJ_T0039168.1 MGP_NODShiLtJ_G0021158.1 mouse_genomes_project 14 52045310 52053144 - Acin1 protein_coding retained_intron MGP_NODShiLtJ_T0039086.1 MGP_NODShiLtJ_G0021139.1 mouse_genomes_project 14 49532188 49537956 - MGP_NODShiLtJ_P0039086 Olfr1507 protein_coding protein_coding MGP_NODShiLtJ_T0039087.1 MGP_NODShiLtJ_G0021139.1 mouse_genomes_project 14 49532188 49533300 - MGP_NODShiLtJ_P0039087 Olfr1507 protein_coding protein_coding MGP_NODShiLtJ_T0039088.1 MGP_NODShiLtJ_G0021139.1 mouse_genomes_project 14 49532731 49537558 - MGP_NODShiLtJ_P0039088 Olfr1507 protein_coding protein_coding MGP_NODShiLtJ_T0039089.1 MGP_NODShiLtJ_G0021139.1 mouse_genomes_project 14 49532743 49537952 - MGP_NODShiLtJ_P0039089 Olfr1507 protein_coding protein_coding MGP_NODShiLtJ_T0039090.1 MGP_NODShiLtJ_G0021139.1 mouse_genomes_project 14 49532752 49537586 - MGP_NODShiLtJ_P0039090 Olfr1507 protein_coding protein_coding MGP_NODShiLtJ_T0039091.1 MGP_NODShiLtJ_G0021139.1 mouse_genomes_project 14 49533148 49537950 - MGP_NODShiLtJ_P0039091 Olfr1507 protein_coding protein_coding MGP_NODShiLtJ_T0038948.1 MGP_NODShiLtJ_G0021109.1 mouse_genomes_project 14 47827275 47828407 - MGP_NODShiLtJ_P0038948 Olfr750 protein_coding protein_coding MGP_NODShiLtJ_T0098877.1 MGP_NODShiLtJ_G0037271.1 mouse_genomes_project 14 134647613 134647720 - Gm25464 snRNA snRNA MGP_NODShiLtJ_T0002505.1 MGP_NODShiLtJ_G0002408.1 mouse_genomes_project 14 51542069 51542131 + MGP_NODShiLtJ_P0002505 Traj6 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0006613.1 MGP_NODShiLtJ_G0005459.1 mouse_genomes_project 14 20317136 20323184 + Slmapos2 lincRNA lincRNA MGP_NODShiLtJ_T0006667.1 MGP_NODShiLtJ_G0005500.1 mouse_genomes_project 14 79315435 79452270 + Gm6999 lincRNA lincRNA MGP_NODShiLtJ_T0038220.1 MGP_NODShiLtJ_G0020890.1 mouse_genomes_project 14 15683236 15694187 + MGP_NODShiLtJ_P0038220 Vdac2 protein_coding protein_coding MGP_NODShiLtJ_T0038221.1 MGP_NODShiLtJ_G0020890.1 mouse_genomes_project 14 15683468 15700536 + MGP_NODShiLtJ_P0038221 Vdac2 protein_coding protein_coding MGP_NODShiLtJ_T0038222.1 MGP_NODShiLtJ_G0020890.1 mouse_genomes_project 14 15683691 15690601 + MGP_NODShiLtJ_P0038222 Vdac2 protein_coding protein_coding MGP_NODShiLtJ_T0038223.1 MGP_NODShiLtJ_G0020890.1 mouse_genomes_project 14 15685576 15690795 + Vdac2 protein_coding processed_transcript MGP_NODShiLtJ_T0038224.1 MGP_NODShiLtJ_G0020890.1 mouse_genomes_project 14 15690517 15694295 + Vdac2 protein_coding retained_intron MGP_NODShiLtJ_T0038225.1 MGP_NODShiLtJ_G0020890.1 mouse_genomes_project 14 15690614 15691631 + Vdac2 protein_coding retained_intron MGP_NODShiLtJ_T0038226.1 MGP_NODShiLtJ_G0020890.1 mouse_genomes_project 14 15696022 15700818 + Vdac2 protein_coding retained_intron MGP_NODShiLtJ_T0038868.1 MGP_NODShiLtJ_G0021065.1 mouse_genomes_project 14 45594871 45612118 + MGP_NODShiLtJ_P0038868 Naa30 protein_coding protein_coding MGP_NODShiLtJ_T0038869.1 MGP_NODShiLtJ_G0021065.1 mouse_genomes_project 14 45595207 45616488 + MGP_NODShiLtJ_P0038869 Naa30 protein_coding protein_coding MGP_NODShiLtJ_T0038870.1 MGP_NODShiLtJ_G0021065.1 mouse_genomes_project 14 45602263 45614829 + Naa30 protein_coding retained_intron MGP_NODShiLtJ_T0038871.1 MGP_NODShiLtJ_G0021065.1 mouse_genomes_project 14 45602884 45612685 + Naa30 protein_coding retained_intron MGP_NODShiLtJ_T0009935.1 MGP_NODShiLtJ_G0008068.1 mouse_genomes_project 14 130382672 130382776 - Mir6391 miRNA miRNA MGP_NODShiLtJ_T0038358.1 MGP_NODShiLtJ_G0020923.1 mouse_genomes_project 14 21065558 21139790 + MGP_NODShiLtJ_P0038358 Il17rd protein_coding protein_coding MGP_NODShiLtJ_T0009896.1 MGP_NODShiLtJ_G0008029.1 mouse_genomes_project 14 51976676 51976785 - Mir686 miRNA miRNA MGP_NODShiLtJ_T0003504.1 MGP_NODShiLtJ_G0003182.1 mouse_genomes_project 14 55211989 55216081 - Ift88os antisense antisense MGP_NODShiLtJ_T0038852.1 MGP_NODShiLtJ_G0021062.1 mouse_genomes_project 14 45010067 45018825 - MGP_NODShiLtJ_P0038852 Otx2 protein_coding protein_coding MGP_NODShiLtJ_T0038853.1 MGP_NODShiLtJ_G0021062.1 mouse_genomes_project 14 45010570 45016468 - MGP_NODShiLtJ_P0038853 Otx2 protein_coding protein_coding MGP_NODShiLtJ_T0038854.1 MGP_NODShiLtJ_G0021062.1 mouse_genomes_project 14 45010570 45021094 - MGP_NODShiLtJ_P0038854 Otx2 protein_coding protein_coding MGP_NODShiLtJ_T0038855.1 MGP_NODShiLtJ_G0021062.1 mouse_genomes_project 14 45011314 45014337 - MGP_NODShiLtJ_P0038855 Otx2 protein_coding protein_coding MGP_NODShiLtJ_T0038856.1 MGP_NODShiLtJ_G0021062.1 mouse_genomes_project 14 45011351 45021225 - MGP_NODShiLtJ_P0038856 Otx2 protein_coding protein_coding MGP_NODShiLtJ_T0038857.1 MGP_NODShiLtJ_G0021062.1 mouse_genomes_project 14 45011703 45021089 - MGP_NODShiLtJ_P0038857 Otx2 protein_coding protein_coding MGP_NODShiLtJ_T0038858.1 MGP_NODShiLtJ_G0021062.1 mouse_genomes_project 14 45013763 45021089 - MGP_NODShiLtJ_P0038858 Otx2 protein_coding protein_coding MGP_NODShiLtJ_T0038859.1 MGP_NODShiLtJ_G0021062.1 mouse_genomes_project 14 45013813 45019100 - MGP_NODShiLtJ_P0038859 Otx2 protein_coding protein_coding MGP_NODShiLtJ_T0012915.1 MGP_NODShiLtJ_G0011023.1 mouse_genomes_project 14 101901749 101902550 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098873.1 MGP_NODShiLtJ_G0037267.1 mouse_genomes_project 14 122167586 122167678 - Gm22764 snRNA snRNA MGP_NODShiLtJ_T0100095.1 MGP_NODShiLtJ_G0038489.1 mouse_genomes_project 14 26665279 26665476 - Gm23946 snoRNA snoRNA MGP_NODShiLtJ_T0038953.1 MGP_NODShiLtJ_G0021113.1 mouse_genomes_project 14 47931971 47933734 - MGP_NODShiLtJ_P0038953 Rnase1 protein_coding protein_coding MGP_NODShiLtJ_T0038565.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544307 26555181 + MGP_NODShiLtJ_P0038565 Oxnad1 protein_coding protein_coding MGP_NODShiLtJ_T0038566.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544309 26560049 + MGP_NODShiLtJ_P0038566 Oxnad1 protein_coding protein_coding MGP_NODShiLtJ_T0038567.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544346 26566707 + MGP_NODShiLtJ_P0038567 Oxnad1 protein_coding protein_coding MGP_NODShiLtJ_T0038568.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544720 26563136 + MGP_NODShiLtJ_P0038568 Oxnad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038569.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544744 26566707 + MGP_NODShiLtJ_P0038569 Oxnad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038570.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544759 26563005 + MGP_NODShiLtJ_P0038570 Oxnad1 protein_coding protein_coding MGP_NODShiLtJ_T0038571.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544767 26563547 + Oxnad1 protein_coding retained_intron MGP_NODShiLtJ_T0038572.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544767 26560129 + MGP_NODShiLtJ_P0038572 Oxnad1 protein_coding protein_coding MGP_NODShiLtJ_T0038573.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26544810 26560089 + MGP_NODShiLtJ_P0038573 Oxnad1 protein_coding protein_coding MGP_NODShiLtJ_T0038574.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26558903 26566160 + MGP_NODShiLtJ_P0038574 Oxnad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038575.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26558966 26566357 + MGP_NODShiLtJ_P0038575 Oxnad1 protein_coding protein_coding MGP_NODShiLtJ_T0038576.1 MGP_NODShiLtJ_G0020971.1 mouse_genomes_project 14 26564322 26565787 + Oxnad1 protein_coding retained_intron MGP_NODShiLtJ_T0039411.1 MGP_NODShiLtJ_G0021244.1 mouse_genomes_project 14 54792906 54803300 - MGP_NODShiLtJ_P0039411 Gjb6 protein_coding protein_coding MGP_NODShiLtJ_T0039412.1 MGP_NODShiLtJ_G0021244.1 mouse_genomes_project 14 54793918 54802970 - MGP_NODShiLtJ_P0039412 Gjb6 protein_coding protein_coding MGP_NODShiLtJ_T0039413.1 MGP_NODShiLtJ_G0021244.1 mouse_genomes_project 14 54800473 54801687 - Gjb6 protein_coding processed_transcript MGP_NODShiLtJ_T0003534.1 MGP_NODShiLtJ_G0003203.1 mouse_genomes_project 14 136447848 136449258 + Gm28932 antisense antisense MGP_NODShiLtJ_T0002461.1 MGP_NODShiLtJ_G0002366.1 mouse_genomes_project 14 51490590 51490656 + MGP_NODShiLtJ_P0002461 Traj53 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038954.1 MGP_NODShiLtJ_G0021114.1 mouse_genomes_project 14 47951166 47952022 + MGP_NODShiLtJ_P0038954 Rnase2b protein_coding protein_coding MGP_NODShiLtJ_T0038143.1 MGP_NODShiLtJ_G0020870.1 mouse_genomes_project 14 14180170 14205833 - MGP_NODShiLtJ_P0038143 Anxa7 protein_coding protein_coding MGP_NODShiLtJ_T0038144.1 MGP_NODShiLtJ_G0020870.1 mouse_genomes_project 14 14180170 14205833 - MGP_NODShiLtJ_P0038144 Anxa7 protein_coding protein_coding MGP_NODShiLtJ_T0038145.1 MGP_NODShiLtJ_G0020870.1 mouse_genomes_project 14 14180187 14205821 - MGP_NODShiLtJ_P0038145 Anxa7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100107.1 MGP_NODShiLtJ_G0038501.1 mouse_genomes_project 14 55021708 55021828 - Gm23593 snoRNA snoRNA MGP_NODShiLtJ_T0012856.1 MGP_NODShiLtJ_G0010964.1 mouse_genomes_project 14 12270467 12271637 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098872.1 MGP_NODShiLtJ_G0037266.1 mouse_genomes_project 14 120189635 120189738 + Gm26255 snRNA snRNA MGP_NODShiLtJ_T0002611.1 MGP_NODShiLtJ_G0002497.1 mouse_genomes_project 14 51118455 51119181 + MGP_NODShiLtJ_P0002611 Trav18 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002612.1 MGP_NODShiLtJ_G0002497.1 mouse_genomes_project 14 51118455 51119181 + MGP_NODShiLtJ_P0002612 Trav18 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038715.1 MGP_NODShiLtJ_G0021024.1 mouse_genomes_project 14 33625460 35011720 - MGP_NODShiLtJ_P0038715 Nrg3 protein_coding protein_coding MGP_NODShiLtJ_T0038716.1 MGP_NODShiLtJ_G0021024.1 mouse_genomes_project 14 33626987 35011457 - MGP_NODShiLtJ_P0038716 Nrg3 protein_coding protein_coding MGP_NODShiLtJ_T0038717.1 MGP_NODShiLtJ_G0021024.1 mouse_genomes_project 14 33627003 35011459 - MGP_NODShiLtJ_P0038717 Nrg3 protein_coding protein_coding MGP_NODShiLtJ_T0038718.1 MGP_NODShiLtJ_G0021024.1 mouse_genomes_project 14 34428854 35011298 - Nrg3 protein_coding retained_intron MGP_NODShiLtJ_T0003517.1 MGP_NODShiLtJ_G0003193.1 mouse_genomes_project 14 68084494 68087857 - Gm27221 antisense antisense MGP_NODShiLtJ_T0100127.1 MGP_NODShiLtJ_G0038521.1 mouse_genomes_project 14 99963752 99963878 + Gm24680 snoRNA snoRNA MGP_NODShiLtJ_T0006632.1 MGP_NODShiLtJ_G0005474.1 mouse_genomes_project 14 47610590 47617549 + Gm26782 lincRNA lincRNA MGP_NODShiLtJ_T0006633.1 MGP_NODShiLtJ_G0005474.1 mouse_genomes_project 14 47610602 47619212 + Gm26782 lincRNA lincRNA MGP_NODShiLtJ_T0038318.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20341746 20476680 - MGP_NODShiLtJ_P0038318 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038319.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20341751 20411029 - MGP_NODShiLtJ_P0038319 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038320.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20341752 20397692 - MGP_NODShiLtJ_P0038320 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038321.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20341753 20475489 - MGP_NODShiLtJ_P0038321 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038322.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20341978 20475367 - MGP_NODShiLtJ_P0038322 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038323.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20341978 20475367 - MGP_NODShiLtJ_P0038323 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038324.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20342874 20476644 - MGP_NODShiLtJ_P0038324 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038325.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20343308 20397679 - MGP_NODShiLtJ_P0038325 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038326.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20351012 20374023 - MGP_NODShiLtJ_P0038326 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038327.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20355807 20373854 - Slmap protein_coding processed_transcript MGP_NODShiLtJ_T0038328.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20355883 20358660 - Slmap protein_coding retained_intron MGP_NODShiLtJ_T0038329.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20356106 20374089 - MGP_NODShiLtJ_P0038329 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038330.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20356832 20369461 - Slmap protein_coding retained_intron MGP_NODShiLtJ_T0038331.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20367399 20373937 - Slmap protein_coding retained_intron MGP_NODShiLtJ_T0038332.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20373822 20401201 - MGP_NODShiLtJ_P0038332 Slmap protein_coding protein_coding MGP_NODShiLtJ_T0038333.1 MGP_NODShiLtJ_G0020914.1 mouse_genomes_project 14 20397306 20401192 - Slmap protein_coding retained_intron MGP_NODShiLtJ_T0040030.1 MGP_NODShiLtJ_G0021468.1 mouse_genomes_project 14 110190186 110233754 - MGP_NODShiLtJ_P0040030 Mycbp2 protein_coding protein_coding MGP_NODShiLtJ_T0040031.1 MGP_NODShiLtJ_G0021468.1 mouse_genomes_project 14 110190186 110469532 - MGP_NODShiLtJ_P0040031 Mycbp2 protein_coding protein_coding MGP_NODShiLtJ_T0040032.1 MGP_NODShiLtJ_G0021468.1 mouse_genomes_project 14 110190186 110469331 - MGP_NODShiLtJ_P0040032 Mycbp2 protein_coding protein_coding MGP_NODShiLtJ_T0040033.1 MGP_NODShiLtJ_G0021468.1 mouse_genomes_project 14 110190895 110469249 - MGP_NODShiLtJ_P0040033 Mycbp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040034.1 MGP_NODShiLtJ_G0021468.1 mouse_genomes_project 14 110190908 110192172 - Mycbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0040035.1 MGP_NODShiLtJ_G0021468.1 mouse_genomes_project 14 110214381 110230799 - Mycbp2 protein_coding retained_intron MGP_NODShiLtJ_T0040036.1 MGP_NODShiLtJ_G0021468.1 mouse_genomes_project 14 110233803 110272198 - MGP_NODShiLtJ_P0040036 Mycbp2 protein_coding protein_coding MGP_NODShiLtJ_T0040037.1 MGP_NODShiLtJ_G0021468.1 mouse_genomes_project 14 110429842 110469546 - Mycbp2 protein_coding retained_intron MGP_NODShiLtJ_T0098851.1 MGP_NODShiLtJ_G0037245.1 mouse_genomes_project 14 55566379 55566526 - Gm22738 snRNA snRNA MGP_NODShiLtJ_T0039499.1 MGP_NODShiLtJ_G0021271.1 mouse_genomes_project 14 58410346 58413166 + MGP_NODShiLtJ_P0039499 Amer2 protein_coding protein_coding MGP_NODShiLtJ_T0039365.1 MGP_NODShiLtJ_G0021211.1 mouse_genomes_project 14 53326185 53347462 + MGP_NODShiLtJ_P0039365 Nynrin protein_coding protein_coding MGP_NODShiLtJ_T0039366.1 MGP_NODShiLtJ_G0021211.1 mouse_genomes_project 14 53326264 53347906 + MGP_NODShiLtJ_P0039366 Nynrin protein_coding protein_coding MGP_NODShiLtJ_T0097942.1 MGP_NODShiLtJ_G0036354.1 mouse_genomes_project 14 76748605 76748715 + n-R5s48 rRNA rRNA MGP_NODShiLtJ_T0040078.1 MGP_NODShiLtJ_G0021489.1 mouse_genomes_project 14 130039302 130040114 + MGP_NODShiLtJ_P0040078 Gm9376 protein_coding protein_coding MGP_NODShiLtJ_T0098857.1 MGP_NODShiLtJ_G0037251.1 mouse_genomes_project 14 82569806 82569976 - Gm22891 snRNA snRNA MGP_NODShiLtJ_T0038045.1 MGP_NODShiLtJ_G0020837.1 mouse_genomes_project 14 7013326 7109045 + MGP_NODShiLtJ_P0038045 Atxn7 protein_coding protein_coding MGP_NODShiLtJ_T0006605.1 MGP_NODShiLtJ_G0005456.1 mouse_genomes_project 14 19484192 19509185 - Gm26660 lincRNA lincRNA MGP_NODShiLtJ_T0002617.1 MGP_NODShiLtJ_G0002501.1 mouse_genomes_project 14 51261646 51262234 + MGP_NODShiLtJ_P0002617 Trdv2-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002618.1 MGP_NODShiLtJ_G0002501.1 mouse_genomes_project 14 51261646 51262234 + MGP_NODShiLtJ_P0002618 Trdv2-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012914.1 MGP_NODShiLtJ_G0011022.1 mouse_genomes_project 14 92748830 92749800 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039651.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64813946 64826410 + MGP_NODShiLtJ_P0039651 Stmn4 protein_coding protein_coding MGP_NODShiLtJ_T0039652.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64813954 64831334 + MGP_NODShiLtJ_P0039652 Stmn4 protein_coding protein_coding MGP_NODShiLtJ_T0039653.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64814017 64825507 + Stmn4 protein_coding retained_intron MGP_NODShiLtJ_T0039654.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64814017 64825296 + Stmn4 protein_coding processed_transcript MGP_NODShiLtJ_T0039655.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64814023 64831328 + MGP_NODShiLtJ_P0039655 Stmn4 protein_coding protein_coding MGP_NODShiLtJ_T0039656.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64814024 64831328 + MGP_NODShiLtJ_P0039656 Stmn4 protein_coding protein_coding MGP_NODShiLtJ_T0039657.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64814025 64831302 + MGP_NODShiLtJ_P0039657 Stmn4 protein_coding protein_coding MGP_NODShiLtJ_T0039658.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64814028 64826415 + MGP_NODShiLtJ_P0039658 Stmn4 protein_coding protein_coding MGP_NODShiLtJ_T0039659.1 MGP_NODShiLtJ_G0021335.1 mouse_genomes_project 14 64814031 64827756 + Stmn4 protein_coding retained_intron MGP_NODShiLtJ_T0002532.1 MGP_NODShiLtJ_G0002433.1 mouse_genomes_project 14 51539310 51539347 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0039527.1 MGP_NODShiLtJ_G0021282.1 mouse_genomes_project 14 59707378 59716825 + MGP_NODShiLtJ_P0039527 Trim13 protein_coding protein_coding MGP_NODShiLtJ_T0039528.1 MGP_NODShiLtJ_G0021282.1 mouse_genomes_project 14 59708664 59715462 + MGP_NODShiLtJ_P0039528 Trim13 protein_coding protein_coding MGP_NODShiLtJ_T0039628.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64396225 64412210 + MGP_NODShiLtJ_P0039628 Clu protein_coding protein_coding MGP_NODShiLtJ_T0039629.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64396384 64406307 + MGP_NODShiLtJ_P0039629 Clu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039630.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64396396 64403152 + Clu protein_coding retained_intron MGP_NODShiLtJ_T0039631.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64397460 64406622 + MGP_NODShiLtJ_P0039631 Clu protein_coding protein_coding MGP_NODShiLtJ_T0039632.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64398362 64406526 + MGP_NODShiLtJ_P0039632 Clu protein_coding protein_coding MGP_NODShiLtJ_T0039633.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64398538 64406503 + MGP_NODShiLtJ_P0039633 Clu protein_coding protein_coding MGP_NODShiLtJ_T0039634.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64401671 64406438 + MGP_NODShiLtJ_P0039634 Clu protein_coding protein_coding MGP_NODShiLtJ_T0039635.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64401916 64405579 + MGP_NODShiLtJ_P0039635 Clu protein_coding protein_coding MGP_NODShiLtJ_T0039636.1 MGP_NODShiLtJ_G0021328.1 mouse_genomes_project 14 64405285 64406635 + Clu protein_coding retained_intron MGP_NODShiLtJ_T0009913.1 MGP_NODShiLtJ_G0008046.1 mouse_genomes_project 14 68218855 68218928 + Mir6950 miRNA miRNA MGP_NODShiLtJ_T0040039.1 MGP_NODShiLtJ_G0021470.1 mouse_genomes_project 14 110809250 110867485 + MGP_NODShiLtJ_P0040039 Slain1 protein_coding protein_coding MGP_NODShiLtJ_T0040040.1 MGP_NODShiLtJ_G0021470.1 mouse_genomes_project 14 110809668 110866888 + MGP_NODShiLtJ_P0040040 Slain1 protein_coding protein_coding MGP_NODShiLtJ_T0040041.1 MGP_NODShiLtJ_G0021470.1 mouse_genomes_project 14 110814793 110847596 + MGP_NODShiLtJ_P0040041 Slain1 protein_coding protein_coding MGP_NODShiLtJ_T0040042.1 MGP_NODShiLtJ_G0021470.1 mouse_genomes_project 14 110823514 110867380 + MGP_NODShiLtJ_P0040042 Slain1 protein_coding protein_coding MGP_NODShiLtJ_T0006644.1 MGP_NODShiLtJ_G0005483.1 mouse_genomes_project 14 55775626 55780118 + 3110083C13Rik lincRNA lincRNA MGP_NODShiLtJ_T0002558.1 MGP_NODShiLtJ_G0002453.1 mouse_genomes_project 14 49810310 49810790 + MGP_NODShiLtJ_P0002558 Trav6d-4 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002559.1 MGP_NODShiLtJ_G0002453.1 mouse_genomes_project 14 49810341 49810790 + MGP_NODShiLtJ_P0002559 Trav6d-4 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0100140.1 MGP_NODShiLtJ_G0038534.1 mouse_genomes_project 14 117198862 117198980 + Gm24229 snoRNA snoRNA MGP_NODShiLtJ_T0038438.1 MGP_NODShiLtJ_G0020947.1 mouse_genomes_project 14 25297151 25335796 + MGP_NODShiLtJ_P0038438 Nek4 protein_coding protein_coding MGP_NODShiLtJ_T0038439.1 MGP_NODShiLtJ_G0020947.1 mouse_genomes_project 14 25297291 25338236 + MGP_NODShiLtJ_P0038439 Nek4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039380.1 MGP_NODShiLtJ_G0021224.1 mouse_genomes_project 14 53676648 53680779 - MGP_NODShiLtJ_P0039380 Gzmg protein_coding protein_coding MGP_NODShiLtJ_T0100120.1 MGP_NODShiLtJ_G0038514.1 mouse_genomes_project 14 77914353 77914475 + Gm26251 snoRNA snoRNA MGP_NODShiLtJ_T0039933.1 MGP_NODShiLtJ_G0021432.1 mouse_genomes_project 14 78699951 78716056 - MGP_NODShiLtJ_P0039933 Rgcc protein_coding protein_coding MGP_NODShiLtJ_T0038371.1 MGP_NODShiLtJ_G0020930.1 mouse_genomes_project 14 23078105 23948231 - MGP_NODShiLtJ_P0038371 Cacna2d3 protein_coding protein_coding MGP_NODShiLtJ_T0002500.1 MGP_NODShiLtJ_G0002403.1 mouse_genomes_project 14 51535120 51535177 + MGP_NODShiLtJ_P0002500 Traj13 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0006665.1 MGP_NODShiLtJ_G0005499.1 mouse_genomes_project 14 76693369 76724337 - Gm6994 lincRNA lincRNA MGP_NODShiLtJ_T0006666.1 MGP_NODShiLtJ_G0005499.1 mouse_genomes_project 14 76693992 76717978 - Gm6994 lincRNA lincRNA MGP_NODShiLtJ_T0038890.1 MGP_NODShiLtJ_G0021074.1 mouse_genomes_project 14 46702548 46703520 - MGP_NODShiLtJ_P0038890 Olfr729 protein_coding protein_coding MGP_NODShiLtJ_T0039697.1 MGP_NODShiLtJ_G0021346.1 mouse_genomes_project 14 66314531 66318728 + MGP_NODShiLtJ_P0039697 Gnrh1 protein_coding protein_coding MGP_NODShiLtJ_T0097765.1 MGP_NODShiLtJ_G0036177.1 mouse_genomes_project 14 114282828 114283018 - pseudogene pseudogene MGP_NODShiLtJ_T0038647.1 MGP_NODShiLtJ_G0020991.1 mouse_genomes_project 14 28050314 28130971 + MGP_NODShiLtJ_P0038647 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0038286.1 MGP_NODShiLtJ_G0020903.1 mouse_genomes_project 14 20041404 20056670 - MGP_NODShiLtJ_P0038286 protein_coding protein_coding MGP_NODShiLtJ_T0038293.1 MGP_NODShiLtJ_G0020903.1 mouse_genomes_project 14 20042780 20056633 - MGP_NODShiLtJ_P0038293 protein_coding protein_coding MGP_NODShiLtJ_T0006620.1 MGP_NODShiLtJ_G0005465.1 mouse_genomes_project 14 35243400 35279779 + 1700109I08Rik lincRNA lincRNA MGP_NODShiLtJ_T0002484.1 MGP_NODShiLtJ_G0002387.1 mouse_genomes_project 14 51518364 51518423 + MGP_NODShiLtJ_P0002484 Traj30 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0003486.1 MGP_NODShiLtJ_G0003168.1 mouse_genomes_project 14 41632849 41643589 + Gm15601 antisense antisense MGP_NODShiLtJ_T0002494.1 MGP_NODShiLtJ_G0002397.1 mouse_genomes_project 14 51528836 51528894 + MGP_NODShiLtJ_P0002494 Traj20 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002556.1 MGP_NODShiLtJ_G0002451.1 mouse_genomes_project 14 49765344 49765870 + MGP_NODShiLtJ_P0002556 Trav4-2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039363.1 MGP_NODShiLtJ_G0021210.1 mouse_genomes_project 14 53291311 53300428 + MGP_NODShiLtJ_P0039363 Nfatc4 protein_coding protein_coding MGP_NODShiLtJ_T0039364.1 MGP_NODShiLtJ_G0021210.1 mouse_genomes_project 14 53291311 53300428 + MGP_NODShiLtJ_P0039364 Nfatc4 protein_coding protein_coding MGP_NODShiLtJ_T0039613.1 MGP_NODShiLtJ_G0021320.1 mouse_genomes_project 14 63782827 63808553 - MGP_NODShiLtJ_P0039613 Pnoc protein_coding protein_coding MGP_NODShiLtJ_T0039458.1 MGP_NODShiLtJ_G0021257.1 mouse_genomes_project 14 57003690 57017048 - MGP_NODShiLtJ_P0039458 1700129C05Rik protein_coding protein_coding MGP_NODShiLtJ_T0039459.1 MGP_NODShiLtJ_G0021257.1 mouse_genomes_project 14 57003889 57017048 - MGP_NODShiLtJ_P0039459 1700129C05Rik protein_coding protein_coding MGP_NODShiLtJ_T0039460.1 MGP_NODShiLtJ_G0021257.1 mouse_genomes_project 14 57003892 57017048 - MGP_NODShiLtJ_P0039460 1700129C05Rik protein_coding protein_coding MGP_NODShiLtJ_T0039461.1 MGP_NODShiLtJ_G0021257.1 mouse_genomes_project 14 57015480 57017048 - MGP_NODShiLtJ_P0039461 1700129C05Rik protein_coding protein_coding MGP_NODShiLtJ_T0039739.1 MGP_NODShiLtJ_G0021370.1 mouse_genomes_project 14 68706157 68721826 - MGP_NODShiLtJ_P0039739 Ccar2 protein_coding protein_coding MGP_NODShiLtJ_T0002503.1 MGP_NODShiLtJ_G0002406.1 mouse_genomes_project 14 51538786 51538844 + MGP_NODShiLtJ_P0002503 Traj9 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002583.1 MGP_NODShiLtJ_G0002474.1 mouse_genomes_project 14 50459610 50460118 + MGP_NODShiLtJ_P0002583 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038579.1 MGP_NODShiLtJ_G0020973.1 mouse_genomes_project 14 26631429 26651538 + MGP_NODShiLtJ_P0038579 Ncoa4 protein_coding protein_coding MGP_NODShiLtJ_T0038580.1 MGP_NODShiLtJ_G0020973.1 mouse_genomes_project 14 26631502 26647924 + MGP_NODShiLtJ_P0038580 Ncoa4 protein_coding protein_coding MGP_NODShiLtJ_T0038581.1 MGP_NODShiLtJ_G0020973.1 mouse_genomes_project 14 26631545 26647809 + MGP_NODShiLtJ_P0038581 Ncoa4 protein_coding protein_coding MGP_NODShiLtJ_T0038582.1 MGP_NODShiLtJ_G0020973.1 mouse_genomes_project 14 26637153 26651538 + MGP_NODShiLtJ_P0038582 Ncoa4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038583.1 MGP_NODShiLtJ_G0020973.1 mouse_genomes_project 14 26637355 26650930 + MGP_NODShiLtJ_P0038583 Ncoa4 protein_coding protein_coding MGP_NODShiLtJ_T0038584.1 MGP_NODShiLtJ_G0020973.1 mouse_genomes_project 14 26637356 26644378 + MGP_NODShiLtJ_P0038584 Ncoa4 protein_coding protein_coding MGP_NODShiLtJ_T0038585.1 MGP_NODShiLtJ_G0020973.1 mouse_genomes_project 14 26637356 26644082 + MGP_NODShiLtJ_P0038585 Ncoa4 protein_coding protein_coding MGP_NODShiLtJ_T0038587.1 MGP_NODShiLtJ_G0020973.1 mouse_genomes_project 14 26637805 26644305 + MGP_NODShiLtJ_P0038587 Ncoa4 protein_coding protein_coding MGP_NODShiLtJ_T0002477.1 MGP_NODShiLtJ_G0002380.1 mouse_genomes_project 14 51509204 51509266 + MGP_NODShiLtJ_P0002477 Traj38 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038359.1 MGP_NODShiLtJ_G0020924.1 mouse_genomes_project 14 21250986 21252318 + MGP_NODShiLtJ_P0038359 protein_coding protein_coding MGP_NODShiLtJ_T0012899.1 MGP_NODShiLtJ_G0011007.1 mouse_genomes_project 14 57392115 57392410 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039372.1 MGP_NODShiLtJ_G0021216.1 mouse_genomes_project 14 53509004 53511432 + MGP_NODShiLtJ_P0039372 Mcpt1 protein_coding protein_coding MGP_NODShiLtJ_T0000901.1 MGP_NODShiLtJ_G0000830.1 mouse_genomes_project 14 68019248 68020745 + TEC TEC MGP_NODShiLtJ_T0002594.1 MGP_NODShiLtJ_G0002483.1 mouse_genomes_project 14 50644490 50645089 + MGP_NODShiLtJ_P0002594 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0040024.1 MGP_NODShiLtJ_G0021467.1 mouse_genomes_project 14 110153846 110175814 - MGP_NODShiLtJ_P0040024 Fbxl3 protein_coding protein_coding MGP_NODShiLtJ_T0040025.1 MGP_NODShiLtJ_G0021467.1 mouse_genomes_project 14 110154641 110175259 - MGP_NODShiLtJ_P0040025 Fbxl3 protein_coding protein_coding MGP_NODShiLtJ_T0040026.1 MGP_NODShiLtJ_G0021467.1 mouse_genomes_project 14 110155291 110175235 - MGP_NODShiLtJ_P0040026 Fbxl3 protein_coding protein_coding MGP_NODShiLtJ_T0040027.1 MGP_NODShiLtJ_G0021467.1 mouse_genomes_project 14 110157441 110166078 - Fbxl3 protein_coding retained_intron MGP_NODShiLtJ_T0040028.1 MGP_NODShiLtJ_G0021467.1 mouse_genomes_project 14 110165674 110175826 - MGP_NODShiLtJ_P0040028 Fbxl3 protein_coding protein_coding MGP_NODShiLtJ_T0040029.1 MGP_NODShiLtJ_G0021467.1 mouse_genomes_project 14 110165712 110172008 - MGP_NODShiLtJ_P0040029 Fbxl3 protein_coding protein_coding MGP_NODShiLtJ_T0098844.1 MGP_NODShiLtJ_G0037238.1 mouse_genomes_project 14 46273371 46273457 + Gm22989 snRNA snRNA MGP_NODShiLtJ_T0002529.1 MGP_NODShiLtJ_G0002430.1 mouse_genomes_project 14 51494935 51494978 + TR_J_pseudogene TR_J_pseudogene MGP_NODShiLtJ_T0003489.1 MGP_NODShiLtJ_G0003171.1 mouse_genomes_project 14 51246324 51272988 - antisense antisense MGP_NODShiLtJ_T0038771.1 MGP_NODShiLtJ_G0021044.1 mouse_genomes_project 14 42509921 42513930 + Gm15217 protein_coding processed_transcript MGP_NODShiLtJ_T0038772.1 MGP_NODShiLtJ_G0021044.1 mouse_genomes_project 14 42509974 42514120 + MGP_NODShiLtJ_P0038772 Gm15217 protein_coding protein_coding MGP_NODShiLtJ_T0038773.1 MGP_NODShiLtJ_G0021044.1 mouse_genomes_project 14 42511632 42513880 + Gm15217 protein_coding processed_transcript MGP_NODShiLtJ_T0040074.1 MGP_NODShiLtJ_G0021485.1 mouse_genomes_project 14 129752222 129793559 - MGP_NODShiLtJ_P0040074 Dct protein_coding protein_coding MGP_NODShiLtJ_T0012855.1 MGP_NODShiLtJ_G0010963.1 mouse_genomes_project 14 12143067 12145099 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100144.1 MGP_NODShiLtJ_G0038538.1 mouse_genomes_project 14 136396470 136396598 + Gm25272 snoRNA snoRNA MGP_NODShiLtJ_T0100116.1 MGP_NODShiLtJ_G0038510.1 mouse_genomes_project 14 66763915 66764037 - Gm22319 snoRNA snoRNA MGP_NODShiLtJ_T0038058.1 MGP_NODShiLtJ_G0020844.1 mouse_genomes_project 14 7785257 7893887 + MGP_NODShiLtJ_P0038058 Slc4a7 protein_coding protein_coding MGP_NODShiLtJ_T0039872.1 MGP_NODShiLtJ_G0021406.1 mouse_genomes_project 14 74256993 74304691 + MGP_NODShiLtJ_P0039872 Cpb2 protein_coding protein_coding MGP_NODShiLtJ_T0002587.1 MGP_NODShiLtJ_G0002478.1 mouse_genomes_project 14 50498306 50498908 + MGP_NODShiLtJ_P0002587 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012908.1 MGP_NODShiLtJ_G0011016.1 mouse_genomes_project 14 73696846 73710606 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039989.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108295773 108479078 - MGP_NODShiLtJ_P0039989 Tbc1d4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039990.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108295775 108479810 - MGP_NODShiLtJ_P0039990 Tbc1d4 protein_coding protein_coding MGP_NODShiLtJ_T0039991.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108295783 108321254 - Tbc1d4 protein_coding retained_intron MGP_NODShiLtJ_T0039992.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108295783 108370847 - MGP_NODShiLtJ_P0039992 Tbc1d4 protein_coding protein_coding MGP_NODShiLtJ_T0039993.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108297138 108479263 - MGP_NODShiLtJ_P0039993 Tbc1d4 protein_coding protein_coding MGP_NODShiLtJ_T0039994.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108320602 108479609 - Tbc1d4 protein_coding retained_intron MGP_NODShiLtJ_T0039995.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108320824 108479444 - Tbc1d4 protein_coding retained_intron MGP_NODShiLtJ_T0039996.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108320824 108479444 - Tbc1d4 protein_coding retained_intron MGP_NODShiLtJ_T0039997.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108320993 108363067 - MGP_NODShiLtJ_P0039997 Tbc1d4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039998.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108321004 108479968 - MGP_NODShiLtJ_P0039998 Tbc1d4 protein_coding protein_coding MGP_NODShiLtJ_T0039999.1 MGP_NODShiLtJ_G0021459.1 mouse_genomes_project 14 108368227 108370791 - Tbc1d4 protein_coding retained_intron MGP_NODShiLtJ_T0039478.1 MGP_NODShiLtJ_G0021263.1 mouse_genomes_project 14 57379011 57420629 - MGP_NODShiLtJ_P0039478 Setdb2 protein_coding protein_coding MGP_NODShiLtJ_T0039479.1 MGP_NODShiLtJ_G0021263.1 mouse_genomes_project 14 57379013 57420622 - MGP_NODShiLtJ_P0039479 Setdb2 protein_coding protein_coding MGP_NODShiLtJ_T0039480.1 MGP_NODShiLtJ_G0021263.1 mouse_genomes_project 14 57379270 57387460 - Setdb2 protein_coding retained_intron MGP_NODShiLtJ_T0039481.1 MGP_NODShiLtJ_G0021263.1 mouse_genomes_project 14 57400338 57420620 - MGP_NODShiLtJ_P0039481 Setdb2 protein_coding protein_coding MGP_NODShiLtJ_T0039482.1 MGP_NODShiLtJ_G0021263.1 mouse_genomes_project 14 57409408 57420618 - Setdb2 protein_coding processed_transcript MGP_NODShiLtJ_T0012865.1 MGP_NODShiLtJ_G0010973.1 mouse_genomes_project 14 20097049 20098271 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012917.1 MGP_NODShiLtJ_G0011025.1 mouse_genomes_project 14 105879604 105880037 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038918.1 MGP_NODShiLtJ_G0021099.1 mouse_genomes_project 14 47627713 47629580 - MGP_NODShiLtJ_P0038918 Klhl33 protein_coding protein_coding MGP_NODShiLtJ_T0039698.1 MGP_NODShiLtJ_G0021347.1 mouse_genomes_project 14 66321208 66508297 - MGP_NODShiLtJ_P0039698 Dock5 protein_coding protein_coding MGP_NODShiLtJ_T0002497.1 MGP_NODShiLtJ_G0002400.1 mouse_genomes_project 14 51531144 51531207 + MGP_NODShiLtJ_P0002497 Traj17 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0098841.1 MGP_NODShiLtJ_G0037235.1 mouse_genomes_project 14 45136134 45136239 - Gm22699 snRNA snRNA MGP_NODShiLtJ_T0038185.1 MGP_NODShiLtJ_G0020885.1 mouse_genomes_project 14 14831681 15270072 + MGP_NODShiLtJ_P0038185 protein_coding protein_coding MGP_NODShiLtJ_T0038652.1 MGP_NODShiLtJ_G0020996.1 mouse_genomes_project 14 28538034 28548980 - MGP_NODShiLtJ_P0038652 Zfp488 protein_coding protein_coding MGP_NODShiLtJ_T0039707.1 MGP_NODShiLtJ_G0021353.1 mouse_genomes_project 14 67745792 67757946 + MGP_NODShiLtJ_P0039707 Stc1 protein_coding protein_coding MGP_NODShiLtJ_T0012912.1 MGP_NODShiLtJ_G0011020.1 mouse_genomes_project 14 79867607 79868360 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012853.1 MGP_NODShiLtJ_G0010961.1 mouse_genomes_project 14 11423129 11424007 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038278.1 MGP_NODShiLtJ_G0020900.1 mouse_genomes_project 14 19833602 19839913 + Ppif protein_coding retained_intron MGP_NODShiLtJ_T0038279.1 MGP_NODShiLtJ_G0020900.1 mouse_genomes_project 14 19833618 19839917 + MGP_NODShiLtJ_P0038279 Ppif protein_coding protein_coding MGP_NODShiLtJ_T0039055.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49289153 49300566 - MGP_NODShiLtJ_P0039055 Mettl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039056.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49289326 49300611 - MGP_NODShiLtJ_P0039056 Mettl3 protein_coding protein_coding MGP_NODShiLtJ_T0039057.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49289334 49295825 - MGP_NODShiLtJ_P0039057 Mettl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039058.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49289342 49291147 - Mettl3 protein_coding retained_intron MGP_NODShiLtJ_T0039059.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49289342 49291230 - MGP_NODShiLtJ_P0039059 Mettl3 protein_coding protein_coding MGP_NODShiLtJ_T0039060.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49289342 49291229 - MGP_NODShiLtJ_P0039060 Mettl3 protein_coding protein_coding MGP_NODShiLtJ_T0039061.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49289988 49300607 - MGP_NODShiLtJ_P0039061 Mettl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039062.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49290188 49291240 - Mettl3 protein_coding retained_intron MGP_NODShiLtJ_T0039063.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49290555 49300604 - MGP_NODShiLtJ_P0039063 Mettl3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039064.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49291138 49293938 - Mettl3 protein_coding retained_intron MGP_NODShiLtJ_T0039065.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49292471 49295253 - Mettl3 protein_coding retained_intron MGP_NODShiLtJ_T0039066.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49292686 49300569 - MGP_NODShiLtJ_P0039066 Mettl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039067.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49292951 49300470 - MGP_NODShiLtJ_P0039067 Mettl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039068.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49293506 49300470 - MGP_NODShiLtJ_P0039068 Mettl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039069.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49293516 49300590 - MGP_NODShiLtJ_P0039069 Mettl3 protein_coding protein_coding MGP_NODShiLtJ_T0039070.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49295832 49300582 - MGP_NODShiLtJ_P0039070 Mettl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039071.1 MGP_NODShiLtJ_G0021131.1 mouse_genomes_project 14 49299126 49300607 - Mettl3 protein_coding retained_intron MGP_NODShiLtJ_T0038031.1 MGP_NODShiLtJ_G0020831.1 mouse_genomes_project 14 5165975 5169976 - MGP_NODShiLtJ_P0038031 Fezf2 protein_coding protein_coding MGP_NODShiLtJ_T0039462.1 MGP_NODShiLtJ_G0021258.1 mouse_genomes_project 14 57034555 57079801 - MGP_NODShiLtJ_P0039462 Gm5142 protein_coding protein_coding MGP_NODShiLtJ_T0039182.1 MGP_NODShiLtJ_G0021165.1 mouse_genomes_project 14 52278135 52294344 + MGP_NODShiLtJ_P0039182 Gm20521 protein_coding protein_coding MGP_NODShiLtJ_T0039375.1 MGP_NODShiLtJ_G0021219.1 mouse_genomes_project 14 53558362 53562149 - MGP_NODShiLtJ_P0039375 Cma2 protein_coding protein_coding MGP_NODShiLtJ_T0040164.1 MGP_NODShiLtJ_G0021519.1 mouse_genomes_project 14 136446545 137399285 - MGP_NODShiLtJ_P0040164 Fgf14 protein_coding protein_coding MGP_NODShiLtJ_T0040165.1 MGP_NODShiLtJ_G0021519.1 mouse_genomes_project 14 136446929 136731377 - MGP_NODShiLtJ_P0040165 Fgf14 protein_coding protein_coding MGP_NODShiLtJ_T0038659.1 MGP_NODShiLtJ_G0021002.1 mouse_genomes_project 14 28775710 28782903 - MGP_NODShiLtJ_P0038659 Gprin2 protein_coding protein_coding MGP_NODShiLtJ_T0000892.1 MGP_NODShiLtJ_G0000821.1 mouse_genomes_project 14 52492601 52494783 - TEC TEC MGP_NODShiLtJ_T0098842.1 MGP_NODShiLtJ_G0037236.1 mouse_genomes_project 14 45393784 45393904 - Gm23470 snRNA snRNA MGP_NODShiLtJ_T0038023.1 MGP_NODShiLtJ_G0020829.1 mouse_genomes_project 14 4312936 5048359 + MGP_NODShiLtJ_P0038023 Ptprg protein_coding protein_coding MGP_NODShiLtJ_T0038024.1 MGP_NODShiLtJ_G0020829.1 mouse_genomes_project 14 4312957 5044040 + MGP_NODShiLtJ_P0038024 Ptprg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038025.1 MGP_NODShiLtJ_G0020829.1 mouse_genomes_project 14 4312985 4756693 + Ptprg protein_coding retained_intron MGP_NODShiLtJ_T0038026.1 MGP_NODShiLtJ_G0020829.1 mouse_genomes_project 14 4891908 4922749 + MGP_NODShiLtJ_P0038026 Ptprg protein_coding protein_coding MGP_NODShiLtJ_T0038027.1 MGP_NODShiLtJ_G0020829.1 mouse_genomes_project 14 4992936 5044039 + MGP_NODShiLtJ_P0038027 Ptprg protein_coding protein_coding MGP_NODShiLtJ_T0038028.1 MGP_NODShiLtJ_G0020829.1 mouse_genomes_project 14 5024541 5029146 + Ptprg protein_coding processed_transcript MGP_NODShiLtJ_T0038920.1 MGP_NODShiLtJ_G0021101.1 mouse_genomes_project 14 47639064 47680846 - MGP_NODShiLtJ_P0038920 Osgep protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038921.1 MGP_NODShiLtJ_G0021101.1 mouse_genomes_project 14 47661736 47680905 - MGP_NODShiLtJ_P0038921 Osgep protein_coding protein_coding MGP_NODShiLtJ_T0038922.1 MGP_NODShiLtJ_G0021101.1 mouse_genomes_project 14 47663638 47680842 - MGP_NODShiLtJ_P0038922 Osgep protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038923.1 MGP_NODShiLtJ_G0021101.1 mouse_genomes_project 14 47663642 47680884 - MGP_NODShiLtJ_P0038923 Osgep protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038924.1 MGP_NODShiLtJ_G0021101.1 mouse_genomes_project 14 47663642 47680700 - MGP_NODShiLtJ_P0038924 Osgep protein_coding protein_coding MGP_NODShiLtJ_T0038925.1 MGP_NODShiLtJ_G0021101.1 mouse_genomes_project 14 47663744 47665326 - Osgep protein_coding retained_intron MGP_NODShiLtJ_T0038926.1 MGP_NODShiLtJ_G0021101.1 mouse_genomes_project 14 47664647 47680638 - MGP_NODShiLtJ_P0038926 Osgep protein_coding protein_coding MGP_NODShiLtJ_T0038927.1 MGP_NODShiLtJ_G0021101.1 mouse_genomes_project 14 47665047 47680855 - Osgep protein_coding retained_intron MGP_NODShiLtJ_T0002474.1 MGP_NODShiLtJ_G0002377.1 mouse_genomes_project 14 51504904 51504959 + MGP_NODShiLtJ_P0002474 Traj41 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038295.1 MGP_NODShiLtJ_G0020907.1 mouse_genomes_project 14 20081861 20085298 - MGP_NODShiLtJ_P0038295 protein_coding protein_coding MGP_NODShiLtJ_T0038296.1 MGP_NODShiLtJ_G0020907.1 mouse_genomes_project 14 20081865 20084904 - MGP_NODShiLtJ_P0038296 protein_coding protein_coding MGP_NODShiLtJ_T0100114.1 MGP_NODShiLtJ_G0038508.1 mouse_genomes_project 14 65491535 65491668 + Gm24258 snoRNA snoRNA MGP_NODShiLtJ_T0100102.1 MGP_NODShiLtJ_G0038496.1 mouse_genomes_project 14 49200551 49200661 - Snord8 snoRNA snoRNA MGP_NODShiLtJ_T0006623.1 MGP_NODShiLtJ_G0005468.1 mouse_genomes_project 14 42569190 42587260 + Gm15221 lincRNA lincRNA MGP_NODShiLtJ_T0039172.1 MGP_NODShiLtJ_G0021162.1 mouse_genomes_project 14 52234005 52241776 - MGP_NODShiLtJ_P0039172 Homez protein_coding protein_coding MGP_NODShiLtJ_T0039173.1 MGP_NODShiLtJ_G0021162.1 mouse_genomes_project 14 52235056 52249192 - MGP_NODShiLtJ_P0039173 Homez protein_coding protein_coding MGP_NODShiLtJ_T0039174.1 MGP_NODShiLtJ_G0021162.1 mouse_genomes_project 14 52236836 52238482 - MGP_NODShiLtJ_P0039174 Homez protein_coding protein_coding MGP_NODShiLtJ_T0039175.1 MGP_NODShiLtJ_G0021162.1 mouse_genomes_project 14 52239193 52256303 - MGP_NODShiLtJ_P0039175 Homez protein_coding protein_coding MGP_NODShiLtJ_T0040105.1 MGP_NODShiLtJ_G0021498.1 mouse_genomes_project 14 132504457 132536213 + MGP_NODShiLtJ_P0040105 Rap2a protein_coding protein_coding MGP_NODShiLtJ_T0040106.1 MGP_NODShiLtJ_G0021498.1 mouse_genomes_project 14 132532619 132536213 + MGP_NODShiLtJ_P0040106 Rap2a protein_coding protein_coding MGP_NODShiLtJ_T0039614.1 MGP_NODShiLtJ_G0021321.1 mouse_genomes_project 14 63922621 63986794 - MGP_NODShiLtJ_P0039614 Elp3 protein_coding protein_coding MGP_NODShiLtJ_T0009880.1 MGP_NODShiLtJ_G0008013.1 mouse_genomes_project 14 6764408 6764488 - Gm27907 miRNA miRNA MGP_NODShiLtJ_T0038781.1 MGP_NODShiLtJ_G0021048.1 mouse_genomes_project 14 42950417 42964286 - MGP_NODShiLtJ_P0038781 Gmfb protein_coding protein_coding MGP_NODShiLtJ_T0038782.1 MGP_NODShiLtJ_G0021048.1 mouse_genomes_project 14 42950417 42964286 - MGP_NODShiLtJ_P0038782 Gmfb protein_coding protein_coding MGP_NODShiLtJ_T0038783.1 MGP_NODShiLtJ_G0021048.1 mouse_genomes_project 14 42956543 42961853 - MGP_NODShiLtJ_P0038783 Gmfb protein_coding protein_coding MGP_NODShiLtJ_T0039559.1 MGP_NODShiLtJ_G0021297.1 mouse_genomes_project 14 61445454 61481734 - MGP_NODShiLtJ_P0039559 Fdft1 protein_coding protein_coding MGP_NODShiLtJ_T0039610.1 MGP_NODShiLtJ_G0021318.1 mouse_genomes_project 14 63646746 63698263 + MGP_NODShiLtJ_P0039610 Fbxo16 protein_coding protein_coding MGP_NODShiLtJ_T0039611.1 MGP_NODShiLtJ_G0021318.1 mouse_genomes_project 14 63650782 63700420 + MGP_NODShiLtJ_P0039611 Fbxo16 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040048.1 MGP_NODShiLtJ_G0021474.1 mouse_genomes_project 14 112423494 112501234 - MGP_NODShiLtJ_P0040048 Rbm26 protein_coding protein_coding MGP_NODShiLtJ_T0040049.1 MGP_NODShiLtJ_G0021474.1 mouse_genomes_project 14 112423515 112501697 - MGP_NODShiLtJ_P0040049 Rbm26 protein_coding protein_coding MGP_NODShiLtJ_T0040050.1 MGP_NODShiLtJ_G0021474.1 mouse_genomes_project 14 112423592 112501701 - MGP_NODShiLtJ_P0040050 Rbm26 protein_coding protein_coding MGP_NODShiLtJ_T0040051.1 MGP_NODShiLtJ_G0021474.1 mouse_genomes_project 14 112424662 112501638 - MGP_NODShiLtJ_P0040051 Rbm26 protein_coding protein_coding MGP_NODShiLtJ_T0101652.1 MGP_NODShiLtJ_G0039821.1 mouse_genomes_project 14 40876531 40880974 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0038435.1 MGP_NODShiLtJ_G0020946.1 mouse_genomes_project 14 25271847 25287683 - MGP_NODShiLtJ_P0038435 Itih1 protein_coding protein_coding MGP_NODShiLtJ_T0038436.1 MGP_NODShiLtJ_G0020946.1 mouse_genomes_project 14 25271847 25287671 - MGP_NODShiLtJ_P0038436 Itih1 protein_coding protein_coding MGP_NODShiLtJ_T0038437.1 MGP_NODShiLtJ_G0020946.1 mouse_genomes_project 14 25287083 25287680 - Itih1 protein_coding retained_intron MGP_NODShiLtJ_T0039861.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74123697 74207648 + MGP_NODShiLtJ_P0039861 Lcp1 protein_coding protein_coding MGP_NODShiLtJ_T0039862.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74123755 74144226 + Lcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0039863.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74123755 74209836 + MGP_NODShiLtJ_P0039863 Lcp1 protein_coding protein_coding MGP_NODShiLtJ_T0039864.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74124095 74209785 + MGP_NODShiLtJ_P0039864 Lcp1 protein_coding protein_coding MGP_NODShiLtJ_T0039865.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74124150 74241083 + MGP_NODShiLtJ_P0039865 Lcp1 protein_coding protein_coding MGP_NODShiLtJ_T0039866.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74128944 74242129 + MGP_NODShiLtJ_P0039866 Lcp1 protein_coding protein_coding MGP_NODShiLtJ_T0039867.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74129084 74209776 + MGP_NODShiLtJ_P0039867 Lcp1 protein_coding protein_coding MGP_NODShiLtJ_T0039868.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74178479 74181513 + Lcp1 protein_coding retained_intron MGP_NODShiLtJ_T0039869.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74179739 74205287 + Lcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0039870.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74197411 74242103 + MGP_NODShiLtJ_P0039870 Lcp1 protein_coding protein_coding MGP_NODShiLtJ_T0039871.1 MGP_NODShiLtJ_G0021405.1 mouse_genomes_project 14 74205044 74207570 + Lcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0006674.1 MGP_NODShiLtJ_G0005506.1 mouse_genomes_project 14 130143952 130179150 + 1700044C05Rik lincRNA lincRNA MGP_NODShiLtJ_T0002681.1 MGP_NODShiLtJ_G0002554.1 mouse_genomes_project 14 51326333 51326636 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0002603.1 MGP_NODShiLtJ_G0002492.1 mouse_genomes_project 14 50895234 50895812 + MGP_NODShiLtJ_P0002603 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0009920.1 MGP_NODShiLtJ_G0008053.1 mouse_genomes_project 14 103052202 103052307 - Gm27441 miRNA miRNA MGP_NODShiLtJ_T0039141.1 MGP_NODShiLtJ_G0021156.1 mouse_genomes_project 14 51992746 51993197 + MGP_NODShiLtJ_P0039141 Gm20726 protein_coding protein_coding MGP_NODShiLtJ_T0039627.1 MGP_NODShiLtJ_G0021327.1 mouse_genomes_project 14 64347258 64381472 - MGP_NODShiLtJ_P0039627 Scara3 protein_coding protein_coding MGP_NODShiLtJ_T0012907.1 MGP_NODShiLtJ_G0011015.1 mouse_genomes_project 14 73696846 73710608 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012913.1 MGP_NODShiLtJ_G0011021.1 mouse_genomes_project 14 90307987 90308971 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039837.1 MGP_NODShiLtJ_G0021396.1 mouse_genomes_project 14 72026749 72033136 + MGP_NODShiLtJ_P0039837 Lpar6 protein_coding protein_coding MGP_NODShiLtJ_T0002462.1 MGP_NODShiLtJ_G0002367.1 mouse_genomes_project 14 51494013 51494079 + MGP_NODShiLtJ_P0002462 Traj52 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002472.1 MGP_NODShiLtJ_G0002375.1 mouse_genomes_project 14 51503415 51503472 + MGP_NODShiLtJ_P0002472 Traj43 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002441.1 MGP_NODShiLtJ_G0002350.1 mouse_genomes_project 14 51549957 51554023 + MGP_NODShiLtJ_P0002441 Trac TR_C_gene TR_C_gene MGP_NODShiLtJ_T0002442.1 MGP_NODShiLtJ_G0002350.1 mouse_genomes_project 14 51549957 51552577 + MGP_NODShiLtJ_P0002442 Trac TR_C_gene TR_C_gene MGP_NODShiLtJ_T0003492.1 MGP_NODShiLtJ_G0003173.1 mouse_genomes_project 14 51461080 51473241 - Gm43434 antisense antisense MGP_NODShiLtJ_T0039195.1 MGP_NODShiLtJ_G0021170.1 mouse_genomes_project 14 52333614 52336191 + MGP_NODShiLtJ_P0039195 Cmtm5 protein_coding protein_coding MGP_NODShiLtJ_T0006624.1 MGP_NODShiLtJ_G0005469.1 mouse_genomes_project 14 42692784 42704876 + E130120K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0039589.1 MGP_NODShiLtJ_G0021310.1 mouse_genomes_project 14 62425497 62442387 + MGP_NODShiLtJ_P0039589 Prss51 protein_coding protein_coding MGP_NODShiLtJ_T0039590.1 MGP_NODShiLtJ_G0021310.1 mouse_genomes_project 14 62433999 62442383 + MGP_NODShiLtJ_P0039590 Prss51 protein_coding protein_coding MGP_NODShiLtJ_T0039591.1 MGP_NODShiLtJ_G0021310.1 mouse_genomes_project 14 62434029 62441825 + MGP_NODShiLtJ_P0039591 Prss51 protein_coding protein_coding MGP_NODShiLtJ_T0039639.1 MGP_NODShiLtJ_G0021331.1 mouse_genomes_project 14 64534772 64577318 - MGP_NODShiLtJ_P0039639 Ephx2 protein_coding protein_coding MGP_NODShiLtJ_T0039959.1 MGP_NODShiLtJ_G0021445.1 mouse_genomes_project 14 88330135 88868950 - MGP_NODShiLtJ_P0039959 Diaph3 protein_coding protein_coding MGP_NODShiLtJ_T0039960.1 MGP_NODShiLtJ_G0021445.1 mouse_genomes_project 14 88331052 88868840 - MGP_NODShiLtJ_P0039960 Diaph3 protein_coding protein_coding MGP_NODShiLtJ_T0012903.1 MGP_NODShiLtJ_G0011011.1 mouse_genomes_project 14 61753709 61754707 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017264.1 MGP_NODShiLtJ_G0015142.1 mouse_genomes_project 14 65764376 65765068 - Gm20675 processed_transcript processed_transcript MGP_NODShiLtJ_T0040077.1 MGP_NODShiLtJ_G0021488.1 mouse_genomes_project 14 130004076 130007875 - MGP_NODShiLtJ_P0040077 Sox21 protein_coding protein_coding MGP_NODShiLtJ_T0038449.1 MGP_NODShiLtJ_G0020950.1 mouse_genomes_project 14 25376226 25383963 - MGP_NODShiLtJ_P0038449 Gnl3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038450.1 MGP_NODShiLtJ_G0020950.1 mouse_genomes_project 14 25376230 25384111 - MGP_NODShiLtJ_P0038450 Gnl3 protein_coding protein_coding MGP_NODShiLtJ_T0003528.1 MGP_NODShiLtJ_G0003199.1 mouse_genomes_project 14 110855560 110862020 - Slain1os antisense antisense MGP_NODShiLtJ_T0012879.1 MGP_NODShiLtJ_G0010987.1 mouse_genomes_project 14 41985525 41985904 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039777.1 MGP_NODShiLtJ_G0021382.1 mouse_genomes_project 14 69141437 69145120 + MGP_NODShiLtJ_P0039777 Reep4 protein_coding protein_coding MGP_NODShiLtJ_T0039077.1 MGP_NODShiLtJ_G0021136.1 mouse_genomes_project 14 49387437 49388606 - MGP_NODShiLtJ_P0039077 protein_coding protein_coding MGP_NODShiLtJ_T0000910.1 MGP_NODShiLtJ_G0000839.1 mouse_genomes_project 14 128365023 128365938 + TEC TEC MGP_NODShiLtJ_T0003513.1 MGP_NODShiLtJ_G0003189.1 mouse_genomes_project 14 65842485 65852293 - Gm6878 antisense antisense MGP_NODShiLtJ_T0039341.1 MGP_NODShiLtJ_G0021199.1 mouse_genomes_project 14 53124153 53133119 + MGP_NODShiLtJ_P0039341 Gmpr2 protein_coding protein_coding MGP_NODShiLtJ_T0012859.1 MGP_NODShiLtJ_G0010967.1 mouse_genomes_project 14 12691799 12692282 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100115.1 MGP_NODShiLtJ_G0038509.1 mouse_genomes_project 14 66124971 66125103 + Gm24981 snoRNA snoRNA MGP_NODShiLtJ_T0100110.1 MGP_NODShiLtJ_G0038504.1 mouse_genomes_project 14 60746325 60746455 + Gm24625 snoRNA snoRNA MGP_NODShiLtJ_T0000898.1 MGP_NODShiLtJ_G0000827.1 mouse_genomes_project 14 65445335 65446707 + TEC TEC MGP_NODShiLtJ_T0098831.1 MGP_NODShiLtJ_G0037225.1 mouse_genomes_project 14 14456091 14456198 + Gm25328 snRNA snRNA MGP_NODShiLtJ_T0009893.1 MGP_NODShiLtJ_G0008026.1 mouse_genomes_project 14 41705403 41705496 - Mir5131 miRNA miRNA MGP_NODShiLtJ_T0039009.1 MGP_NODShiLtJ_G0021125.1 mouse_genomes_project 14 49051434 49081952 - MGP_NODShiLtJ_P0039009 Hnrnpc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003458.1 MGP_NODShiLtJ_G0003149.1 mouse_genomes_project 14 3346558 3404523 + Fhitos antisense antisense MGP_NODShiLtJ_T0038071.1 MGP_NODShiLtJ_G0020848.1 mouse_genomes_project 14 9424312 9492123 + MGP_NODShiLtJ_P0038071 Ngly1 protein_coding protein_coding MGP_NODShiLtJ_T0038072.1 MGP_NODShiLtJ_G0020848.1 mouse_genomes_project 14 9424359 9460729 + Ngly1 protein_coding retained_intron MGP_NODShiLtJ_T0038073.1 MGP_NODShiLtJ_G0020848.1 mouse_genomes_project 14 9458403 9460852 + Ngly1 protein_coding retained_intron MGP_NODShiLtJ_T0039772.1 MGP_NODShiLtJ_G0021378.1 mouse_genomes_project 14 69050538 69061953 + MGP_NODShiLtJ_P0039772 Phyhip protein_coding protein_coding MGP_NODShiLtJ_T0039773.1 MGP_NODShiLtJ_G0021378.1 mouse_genomes_project 14 69051585 69056424 + MGP_NODShiLtJ_P0039773 Phyhip protein_coding protein_coding MGP_NODShiLtJ_T0038074.1 MGP_NODShiLtJ_G0020849.1 mouse_genomes_project 14 9548119 9623690 + MGP_NODShiLtJ_P0038074 Top2b protein_coding protein_coding MGP_NODShiLtJ_T0038075.1 MGP_NODShiLtJ_G0020849.1 mouse_genomes_project 14 9575993 9579843 + Top2b protein_coding retained_intron MGP_NODShiLtJ_T0038076.1 MGP_NODShiLtJ_G0020849.1 mouse_genomes_project 14 9599110 9606327 + MGP_NODShiLtJ_P0038076 Top2b protein_coding protein_coding MGP_NODShiLtJ_T0038077.1 MGP_NODShiLtJ_G0020849.1 mouse_genomes_project 14 9601346 9606006 + MGP_NODShiLtJ_P0038077 Top2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038078.1 MGP_NODShiLtJ_G0020849.1 mouse_genomes_project 14 9603013 9615642 + MGP_NODShiLtJ_P0038078 Top2b protein_coding protein_coding MGP_NODShiLtJ_T0002475.1 MGP_NODShiLtJ_G0002378.1 mouse_genomes_project 14 51506552 51506613 + MGP_NODShiLtJ_P0002475 Traj40 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002575.1 MGP_NODShiLtJ_G0002468.1 mouse_genomes_project 14 50231846 50232349 + MGP_NODShiLtJ_P0002575 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002576.1 MGP_NODShiLtJ_G0002468.1 mouse_genomes_project 14 50231883 50232349 + MGP_NODShiLtJ_P0002576 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0040060.1 MGP_NODShiLtJ_G0021478.1 mouse_genomes_project 14 113511926 113515324 + MGP_NODShiLtJ_P0040060 Trim52 protein_coding protein_coding MGP_NODShiLtJ_T0040061.1 MGP_NODShiLtJ_G0021478.1 mouse_genomes_project 14 113511927 113538778 + Trim52 protein_coding processed_transcript MGP_NODShiLtJ_T0038941.1 MGP_NODShiLtJ_G0021104.1 mouse_genomes_project 14 47701784 47711968 + MGP_NODShiLtJ_P0038941 Pnp protein_coding protein_coding MGP_NODShiLtJ_T0038942.1 MGP_NODShiLtJ_G0021104.1 mouse_genomes_project 14 47701989 47710582 + MGP_NODShiLtJ_P0038942 Pnp protein_coding protein_coding MGP_NODShiLtJ_T0039454.1 MGP_NODShiLtJ_G0021256.1 mouse_genomes_project 14 55847196 55895356 + MGP_NODShiLtJ_P0039454 Fgf9 protein_coding protein_coding MGP_NODShiLtJ_T0039455.1 MGP_NODShiLtJ_G0021256.1 mouse_genomes_project 14 55849446 55890595 + MGP_NODShiLtJ_P0039455 Fgf9 protein_coding protein_coding MGP_NODShiLtJ_T0039456.1 MGP_NODShiLtJ_G0021256.1 mouse_genomes_project 14 55851875 55890595 + MGP_NODShiLtJ_P0039456 Fgf9 protein_coding protein_coding MGP_NODShiLtJ_T0039457.1 MGP_NODShiLtJ_G0021256.1 mouse_genomes_project 14 55853297 55889813 + MGP_NODShiLtJ_P0039457 Fgf9 protein_coding protein_coding MGP_NODShiLtJ_T0006602.1 MGP_NODShiLtJ_G0005454.1 mouse_genomes_project 14 18754551 18755274 + 4930428N03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006603.1 MGP_NODShiLtJ_G0005454.1 mouse_genomes_project 14 18754572 18764373 + 4930428N03Rik lincRNA lincRNA MGP_NODShiLtJ_T0039228.1 MGP_NODShiLtJ_G0021178.1 mouse_genomes_project 14 52516656 52526762 - MGP_NODShiLtJ_P0039228 Jph4 protein_coding protein_coding MGP_NODShiLtJ_T0039229.1 MGP_NODShiLtJ_G0021178.1 mouse_genomes_project 14 52517103 52525379 - MGP_NODShiLtJ_P0039229 Jph4 protein_coding protein_coding MGP_NODShiLtJ_T0039230.1 MGP_NODShiLtJ_G0021178.1 mouse_genomes_project 14 52519468 52520385 - Jph4 protein_coding retained_intron MGP_NODShiLtJ_T0039231.1 MGP_NODShiLtJ_G0021178.1 mouse_genomes_project 14 52521316 52526407 - Jph4 protein_coding retained_intron MGP_NODShiLtJ_T0006675.1 MGP_NODShiLtJ_G0005507.1 mouse_genomes_project 14 130534903 130542870 - Gm27198 lincRNA lincRNA MGP_NODShiLtJ_T0039135.1 MGP_NODShiLtJ_G0021150.1 mouse_genomes_project 14 51897816 51911424 - MGP_NODShiLtJ_P0039135 Haus4 protein_coding protein_coding MGP_NODShiLtJ_T0011257.1 MGP_NODShiLtJ_G0009390.1 mouse_genomes_project 14 25928824 25929126 - Gm24057 misc_RNA misc_RNA MGP_NODShiLtJ_T0039371.1 MGP_NODShiLtJ_G0021215.1 mouse_genomes_project 14 53416207 53419138 - MGP_NODShiLtJ_P0039371 Cma1 protein_coding protein_coding MGP_NODShiLtJ_T0040004.1 MGP_NODShiLtJ_G0021462.1 mouse_genomes_project 14 108613595 108614030 - MGP_NODShiLtJ_P0040004 Gm9922 protein_coding protein_coding MGP_NODShiLtJ_T0002551.1 MGP_NODShiLtJ_G0002447.1 mouse_genomes_project 14 49719495 49720007 + MGP_NODShiLtJ_P0002551 Trav7-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0098828.1 MGP_NODShiLtJ_G0037222.1 mouse_genomes_project 14 6857468 6857565 + Gm25964 snRNA snRNA MGP_NODShiLtJ_T0038079.1 MGP_NODShiLtJ_G0020850.1 mouse_genomes_project 14 9623744 9779143 - MGP_NODShiLtJ_P0038079 Rarb protein_coding protein_coding MGP_NODShiLtJ_T0039917.1 MGP_NODShiLtJ_G0021422.1 mouse_genomes_project 14 76355418 76953281 + MGP_NODShiLtJ_P0039917 Enox1 protein_coding protein_coding MGP_NODShiLtJ_T0002602.1 MGP_NODShiLtJ_G0002491.1 mouse_genomes_project 14 50895226 50895812 + MGP_NODShiLtJ_P0002602 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002604.1 MGP_NODShiLtJ_G0002491.1 mouse_genomes_project 14 50895532 50895808 + MGP_NODShiLtJ_P0002604 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0100113.1 MGP_NODShiLtJ_G0038507.1 mouse_genomes_project 14 63121761 63121897 + Gm26225 snoRNA snoRNA MGP_NODShiLtJ_T0002454.1 MGP_NODShiLtJ_G0002361.1 mouse_genomes_project 14 51462820 51462879 + MGP_NODShiLtJ_P0002454 Trdj2 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0039668.1 MGP_NODShiLtJ_G0021340.1 mouse_genomes_project 14 65415452 65424316 + MGP_NODShiLtJ_P0039668 Pnma2 protein_coding protein_coding MGP_NODShiLtJ_T0039669.1 MGP_NODShiLtJ_G0021340.1 mouse_genomes_project 14 65415490 65423081 + MGP_NODShiLtJ_P0039669 Pnma2 protein_coding protein_coding MGP_NODShiLtJ_T0039670.1 MGP_NODShiLtJ_G0021340.1 mouse_genomes_project 14 65415524 65418988 + Pnma2 protein_coding processed_transcript MGP_NODShiLtJ_T0039671.1 MGP_NODShiLtJ_G0021340.1 mouse_genomes_project 14 65418577 65420296 + Pnma2 protein_coding processed_transcript MGP_NODShiLtJ_T0038161.1 MGP_NODShiLtJ_G0020875.1 mouse_genomes_project 14 14412868 14422177 - MGP_NODShiLtJ_P0038161 Synpo2l protein_coding protein_coding MGP_NODShiLtJ_T0038162.1 MGP_NODShiLtJ_G0020875.1 mouse_genomes_project 14 14412870 14418497 - MGP_NODShiLtJ_P0038162 Synpo2l protein_coding protein_coding MGP_NODShiLtJ_T0038163.1 MGP_NODShiLtJ_G0020875.1 mouse_genomes_project 14 14413340 14422224 - MGP_NODShiLtJ_P0038163 Synpo2l protein_coding protein_coding MGP_NODShiLtJ_T0002677.1 MGP_NODShiLtJ_G0002550.1 mouse_genomes_project 14 50827585 50827852 + TR_V_pseudogene TR_V_pseudogene MGP_NODShiLtJ_T0038097.1 MGP_NODShiLtJ_G0020855.1 mouse_genomes_project 14 11648465 11701049 - MGP_NODShiLtJ_P0038097 Ube2e1 protein_coding protein_coding MGP_NODShiLtJ_T0038098.1 MGP_NODShiLtJ_G0020855.1 mouse_genomes_project 14 11652164 11698439 - Ube2e1 protein_coding retained_intron MGP_NODShiLtJ_T0038099.1 MGP_NODShiLtJ_G0020855.1 mouse_genomes_project 14 11652464 11694768 - Ube2e1 protein_coding processed_transcript MGP_NODShiLtJ_T0038100.1 MGP_NODShiLtJ_G0020855.1 mouse_genomes_project 14 11691294 11698762 - Ube2e1 protein_coding retained_intron MGP_NODShiLtJ_T0040121.1 MGP_NODShiLtJ_G0021507.1 mouse_genomes_project 14 134243243 134246980 + MGP_NODShiLtJ_P0040121 Timm8a2 protein_coding protein_coding MGP_NODShiLtJ_T0012874.1 MGP_NODShiLtJ_G0010982.1 mouse_genomes_project 14 35693664 35694000 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002549.1 MGP_NODShiLtJ_G0002445.1 mouse_genomes_project 14 49666753 49667270 + MGP_NODShiLtJ_P0002549 Trav5-1 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002581.1 MGP_NODShiLtJ_G0002472.1 mouse_genomes_project 14 50406928 50407547 + MGP_NODShiLtJ_P0002581 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039857.1 MGP_NODShiLtJ_G0021402.1 mouse_genomes_project 14 73715519 73920644 - MGP_NODShiLtJ_P0039857 Lrch1 protein_coding protein_coding MGP_NODShiLtJ_T0039858.1 MGP_NODShiLtJ_G0021402.1 mouse_genomes_project 14 73725782 73920427 - MGP_NODShiLtJ_P0039858 Lrch1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0039405.1 MGP_NODShiLtJ_G0021238.1 mouse_genomes_project 14 54647981 54654194 + MGP_NODShiLtJ_P0039405 protein_coding protein_coding MGP_NODShiLtJ_T0039987.1 MGP_NODShiLtJ_G0021458.1 mouse_genomes_project 14 108016947 108019327 - MGP_NODShiLtJ_P0039987 Prr30 protein_coding protein_coding MGP_NODShiLtJ_T0039988.1 MGP_NODShiLtJ_G0021458.1 mouse_genomes_project 14 108016955 108019588 - MGP_NODShiLtJ_P0039988 Prr30 protein_coding protein_coding MGP_NODShiLtJ_T0039169.1 MGP_NODShiLtJ_G0021159.1 mouse_genomes_project 14 52052699 52057271 + MGP_NODShiLtJ_P0039169 1700123O20Rik protein_coding protein_coding MGP_NODShiLtJ_T0039776.1 MGP_NODShiLtJ_G0021381.1 mouse_genomes_project 14 69125933 69133609 + MGP_NODShiLtJ_P0039776 Lgi3 protein_coding protein_coding MGP_NODShiLtJ_T0009932.1 MGP_NODShiLtJ_G0008065.1 mouse_genomes_project 14 126245208 126245288 + Mir92-1 miRNA miRNA MGP_NODShiLtJ_T0039211.1 MGP_NODShiLtJ_G0021176.1 mouse_genomes_project 14 52470118 52502158 - MGP_NODShiLtJ_P0039211 Zfhx2 protein_coding protein_coding MGP_NODShiLtJ_T0039212.1 MGP_NODShiLtJ_G0021176.1 mouse_genomes_project 14 52476053 52482038 - Zfhx2 protein_coding retained_intron MGP_NODShiLtJ_T0039213.1 MGP_NODShiLtJ_G0021176.1 mouse_genomes_project 14 52484375 52490264 - Zfhx2 protein_coding retained_intron MGP_NODShiLtJ_T0039214.1 MGP_NODShiLtJ_G0021176.1 mouse_genomes_project 14 52499428 52501876 - Zfhx2 protein_coding retained_intron MGP_NODShiLtJ_T0100098.1 MGP_NODShiLtJ_G0038492.1 mouse_genomes_project 14 31531378 31531501 + Gm24394 snoRNA snoRNA MGP_NODShiLtJ_T0038881.1 MGP_NODShiLtJ_G0021068.1 mouse_genomes_project 14 46153368 46258603 - MGP_NODShiLtJ_P0038881 3632451O06Rik protein_coding protein_coding MGP_NODShiLtJ_T0038882.1 MGP_NODShiLtJ_G0021068.1 mouse_genomes_project 14 46153476 46258601 - MGP_NODShiLtJ_P0038882 3632451O06Rik protein_coding protein_coding MGP_NODShiLtJ_T0038883.1 MGP_NODShiLtJ_G0021068.1 mouse_genomes_project 14 46210788 46234996 - 3632451O06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0006618.1 MGP_NODShiLtJ_G0005464.1 mouse_genomes_project 14 29414217 29420812 + A930038B10Rik lincRNA lincRNA MGP_NODShiLtJ_T0006619.1 MGP_NODShiLtJ_G0005464.1 mouse_genomes_project 14 29415042 29426439 + A930038B10Rik lincRNA lincRNA MGP_NODShiLtJ_T0009886.1 MGP_NODShiLtJ_G0008019.1 mouse_genomes_project 14 19977468 19977578 - Gm23701 miRNA miRNA MGP_NODShiLtJ_T0003483.1 MGP_NODShiLtJ_G0003165.1 mouse_genomes_project 14 29116625 29117595 + Gm17110 antisense antisense MGP_NODShiLtJ_T0038029.1 MGP_NODShiLtJ_G0020830.1 mouse_genomes_project 14 5091780 5122845 + MGP_NODShiLtJ_P0038029 3830406C13Rik protein_coding protein_coding MGP_NODShiLtJ_T0038030.1 MGP_NODShiLtJ_G0020830.1 mouse_genomes_project 14 5091780 5122845 + MGP_NODShiLtJ_P0038030 3830406C13Rik protein_coding protein_coding MGP_NODShiLtJ_T0003523.1 MGP_NODShiLtJ_G0003195.1 mouse_genomes_project 14 71347826 71362234 + Gm16549 antisense antisense MGP_NODShiLtJ_T0003493.1 MGP_NODShiLtJ_G0003174.1 mouse_genomes_project 14 52010821 52014941 + 4930579G18Rik antisense antisense MGP_NODShiLtJ_T0009916.1 MGP_NODShiLtJ_G0008049.1 mouse_genomes_project 14 71993688 71993777 - Mir687 miRNA miRNA MGP_NODShiLtJ_T0039715.1 MGP_NODShiLtJ_G0021359.1 mouse_genomes_project 14 68025310 68029228 - MGP_NODShiLtJ_P0039715 protein_coding protein_coding MGP_NODShiLtJ_T0039477.1 MGP_NODShiLtJ_G0021262.1 mouse_genomes_project 14 57344002 57369158 - MGP_NODShiLtJ_P0039477 Phf11c protein_coding protein_coding MGP_NODShiLtJ_T0040120.1 MGP_NODShiLtJ_G0021506.1 mouse_genomes_project 14 134160593 134173458 - MGP_NODShiLtJ_P0040120 Gpr183 protein_coding protein_coding MGP_NODShiLtJ_T0039769.1 MGP_NODShiLtJ_G0021376.1 mouse_genomes_project 14 68963991 69021833 - MGP_NODShiLtJ_P0039769 Piwil2 protein_coding protein_coding MGP_NODShiLtJ_T0038876.1 MGP_NODShiLtJ_G0021067.1 mouse_genomes_project 14 45729815 45990341 - MGP_NODShiLtJ_P0038876 Slc35f4 protein_coding protein_coding MGP_NODShiLtJ_T0038877.1 MGP_NODShiLtJ_G0021067.1 mouse_genomes_project 14 45729815 45990320 - MGP_NODShiLtJ_P0038877 Slc35f4 protein_coding protein_coding MGP_NODShiLtJ_T0038878.1 MGP_NODShiLtJ_G0021067.1 mouse_genomes_project 14 45736266 45752408 - Slc35f4 protein_coding processed_transcript MGP_NODShiLtJ_T0038879.1 MGP_NODShiLtJ_G0021067.1 mouse_genomes_project 14 45750288 45990501 - MGP_NODShiLtJ_P0038879 Slc35f4 protein_coding protein_coding MGP_NODShiLtJ_T0038880.1 MGP_NODShiLtJ_G0021067.1 mouse_genomes_project 14 45755257 45990308 - Slc35f4 protein_coding retained_intron MGP_NODShiLtJ_T0039889.1 MGP_NODShiLtJ_G0021414.1 mouse_genomes_project 14 74969391 75088634 - MGP_NODShiLtJ_P0039889 Gtf2f2 protein_coding protein_coding MGP_NODShiLtJ_T0038955.1 MGP_NODShiLtJ_G0021115.1 mouse_genomes_project 14 48006683 48007296 + MGP_NODShiLtJ_P0038955 Ear14 protein_coding protein_coding MGP_NODShiLtJ_T0038388.1 MGP_NODShiLtJ_G0020937.1 mouse_genomes_project 14 24769336 24816903 + MGP_NODShiLtJ_P0038388 Dcp1a protein_coding protein_coding MGP_NODShiLtJ_T0038135.1 MGP_NODShiLtJ_G0020869.1 mouse_genomes_project 14 14112652 14176198 - MGP_NODShiLtJ_P0038135 Cfap70 protein_coding protein_coding MGP_NODShiLtJ_T0038136.1 MGP_NODShiLtJ_G0020869.1 mouse_genomes_project 14 14112652 14176198 - MGP_NODShiLtJ_P0038136 Cfap70 protein_coding protein_coding MGP_NODShiLtJ_T0038137.1 MGP_NODShiLtJ_G0020869.1 mouse_genomes_project 14 14112652 14176198 - MGP_NODShiLtJ_P0038137 Cfap70 protein_coding protein_coding MGP_NODShiLtJ_T0038138.1 MGP_NODShiLtJ_G0020869.1 mouse_genomes_project 14 14112655 14176195 - MGP_NODShiLtJ_P0038138 Cfap70 protein_coding protein_coding MGP_NODShiLtJ_T0038139.1 MGP_NODShiLtJ_G0020869.1 mouse_genomes_project 14 14143702 14176199 - Cfap70 protein_coding retained_intron MGP_NODShiLtJ_T0038140.1 MGP_NODShiLtJ_G0020869.1 mouse_genomes_project 14 14144210 14148851 - Cfap70 protein_coding processed_transcript MGP_NODShiLtJ_T0038141.1 MGP_NODShiLtJ_G0020869.1 mouse_genomes_project 14 14163690 14176196 - MGP_NODShiLtJ_P0038141 Cfap70 protein_coding protein_coding MGP_NODShiLtJ_T0038142.1 MGP_NODShiLtJ_G0020869.1 mouse_genomes_project 14 14171395 14172678 - Cfap70 protein_coding retained_intron MGP_NODShiLtJ_T0039958.1 MGP_NODShiLtJ_G0021444.1 mouse_genomes_project 14 85512361 85632942 + MGP_NODShiLtJ_P0039958 Pcdh17 protein_coding protein_coding MGP_NODShiLtJ_T0038796.1 MGP_NODShiLtJ_G0021051.1 mouse_genomes_project 14 43320149 43358846 - MGP_NODShiLtJ_P0038796 Gch1 protein_coding protein_coding MGP_NODShiLtJ_T0039360.1 MGP_NODShiLtJ_G0021209.1 mouse_genomes_project 14 53250787 53254648 - MGP_NODShiLtJ_P0039360 Ripk3 protein_coding protein_coding MGP_NODShiLtJ_T0039361.1 MGP_NODShiLtJ_G0021209.1 mouse_genomes_project 14 53250787 53254648 - MGP_NODShiLtJ_P0039361 Ripk3 protein_coding protein_coding MGP_NODShiLtJ_T0039362.1 MGP_NODShiLtJ_G0021209.1 mouse_genomes_project 14 53250787 53254648 - MGP_NODShiLtJ_P0039362 Ripk3 protein_coding protein_coding MGP_NODShiLtJ_T0038711.1 MGP_NODShiLtJ_G0021022.1 mouse_genomes_project 14 32084308 32097177 - 2610528A11Rik protein_coding processed_transcript MGP_NODShiLtJ_T0038712.1 MGP_NODShiLtJ_G0021022.1 mouse_genomes_project 14 32084310 32093256 - MGP_NODShiLtJ_P0038712 2610528A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0039778.1 MGP_NODShiLtJ_G0021383.1 mouse_genomes_project 14 69148398 69150906 + Hr protein_coding processed_transcript MGP_NODShiLtJ_T0039779.1 MGP_NODShiLtJ_G0021383.1 mouse_genomes_project 14 69148431 69150852 + Hr protein_coding processed_transcript MGP_NODShiLtJ_T0039780.1 MGP_NODShiLtJ_G0021383.1 mouse_genomes_project 14 69149873 69168564 + MGP_NODShiLtJ_P0039780 Hr protein_coding protein_coding MGP_NODShiLtJ_T0039781.1 MGP_NODShiLtJ_G0021383.1 mouse_genomes_project 14 69150242 69169212 + MGP_NODShiLtJ_P0039781 Hr protein_coding protein_coding MGP_NODShiLtJ_T0039782.1 MGP_NODShiLtJ_G0021383.1 mouse_genomes_project 14 69152086 69169208 + MGP_NODShiLtJ_P0039782 Hr protein_coding protein_coding MGP_NODShiLtJ_T0039802.1 MGP_NODShiLtJ_G0021392.1 mouse_genomes_project 14 71290490 71471321 - MGP_NODShiLtJ_P0039802 Fndc3a protein_coding protein_coding MGP_NODShiLtJ_T0039803.1 MGP_NODShiLtJ_G0021392.1 mouse_genomes_project 14 71292075 71361829 - MGP_NODShiLtJ_P0039803 Fndc3a protein_coding protein_coding MGP_NODShiLtJ_T0039804.1 MGP_NODShiLtJ_G0021392.1 mouse_genomes_project 14 71317999 71321343 - Fndc3a protein_coding retained_intron MGP_NODShiLtJ_T0039805.1 MGP_NODShiLtJ_G0021392.1 mouse_genomes_project 14 71321366 71488790 - MGP_NODShiLtJ_P0039805 Fndc3a protein_coding protein_coding MGP_NODShiLtJ_T0039806.1 MGP_NODShiLtJ_G0021392.1 mouse_genomes_project 14 71331389 71427214 - MGP_NODShiLtJ_P0039806 Fndc3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039807.1 MGP_NODShiLtJ_G0021392.1 mouse_genomes_project 14 71357169 71489245 - Fndc3a protein_coding retained_intron MGP_NODShiLtJ_T0039808.1 MGP_NODShiLtJ_G0021392.1 mouse_genomes_project 14 71424384 71489091 - Fndc3a protein_coding retained_intron MGP_NODShiLtJ_T0002598.1 MGP_NODShiLtJ_G0002487.1 mouse_genomes_project 14 50725791 50726363 + MGP_NODShiLtJ_P0002598 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039369.1 MGP_NODShiLtJ_G0021213.1 mouse_genomes_project 14 53357855 53369735 + MGP_NODShiLtJ_P0039369 Khnyn protein_coding protein_coding MGP_NODShiLtJ_T0039396.1 MGP_NODShiLtJ_G0021234.1 mouse_genomes_project 14 54324147 54391958 - MGP_NODShiLtJ_P0039396 Pspc1 protein_coding protein_coding MGP_NODShiLtJ_T0039397.1 MGP_NODShiLtJ_G0021234.1 mouse_genomes_project 14 54325692 54391958 - MGP_NODShiLtJ_P0039397 Pspc1 protein_coding protein_coding MGP_NODShiLtJ_T0039398.1 MGP_NODShiLtJ_G0021234.1 mouse_genomes_project 14 54356233 54370444 - Pspc1 protein_coding retained_intron MGP_NODShiLtJ_T0039399.1 MGP_NODShiLtJ_G0021234.1 mouse_genomes_project 14 54356556 54391569 - MGP_NODShiLtJ_P0039399 Pspc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038301.1 MGP_NODShiLtJ_G0020909.1 mouse_genomes_project 14 20099425 20112585 + Cphx1 protein_coding processed_transcript MGP_NODShiLtJ_T0038303.1 MGP_NODShiLtJ_G0020909.1 mouse_genomes_project 14 20100153 20113988 + MGP_NODShiLtJ_P0038303 Cphx1 protein_coding protein_coding MGP_NODShiLtJ_T0009924.1 MGP_NODShiLtJ_G0008057.1 mouse_genomes_project 14 112985129 112985258 - Mir6390 miRNA miRNA MGP_NODShiLtJ_T0040081.1 MGP_NODShiLtJ_G0021491.1 mouse_genomes_project 14 130600633 130706203 + MGP_NODShiLtJ_P0040081 Cldn10 protein_coding protein_coding MGP_NODShiLtJ_T0040082.1 MGP_NODShiLtJ_G0021491.1 mouse_genomes_project 14 130600643 130706204 + MGP_NODShiLtJ_P0040082 Cldn10 protein_coding protein_coding MGP_NODShiLtJ_T0040083.1 MGP_NODShiLtJ_G0021491.1 mouse_genomes_project 14 130685301 130707170 + MGP_NODShiLtJ_P0040083 Cldn10 protein_coding protein_coding MGP_NODShiLtJ_T0002508.1 MGP_NODShiLtJ_G0002411.1 mouse_genomes_project 14 51546715 51546781 + MGP_NODShiLtJ_P0002508 Traj3 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038186.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15317573 15355474 + MGP_NODShiLtJ_P0038186 Kat6b protein_coding protein_coding MGP_NODShiLtJ_T0038187.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15317598 15462253 + Kat6b protein_coding processed_transcript MGP_NODShiLtJ_T0038188.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15336094 15512117 + MGP_NODShiLtJ_P0038188 Kat6b protein_coding protein_coding MGP_NODShiLtJ_T0038189.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15336109 15512524 + MGP_NODShiLtJ_P0038189 Kat6b protein_coding protein_coding MGP_NODShiLtJ_T0038190.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15336178 15357006 + Kat6b protein_coding retained_intron MGP_NODShiLtJ_T0038191.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15336178 15510919 + MGP_NODShiLtJ_P0038191 Kat6b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038192.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15336192 15512179 + MGP_NODShiLtJ_P0038192 Kat6b protein_coding protein_coding MGP_NODShiLtJ_T0038193.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15337686 15461673 + Kat6b protein_coding retained_intron MGP_NODShiLtJ_T0038194.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15337718 15358725 + Kat6b protein_coding retained_intron MGP_NODShiLtJ_T0038195.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15337722 15460877 + Kat6b protein_coding retained_intron MGP_NODShiLtJ_T0038196.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15337725 15512524 + MGP_NODShiLtJ_P0038196 Kat6b protein_coding protein_coding MGP_NODShiLtJ_T0038197.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15355113 15511252 + MGP_NODShiLtJ_P0038197 Kat6b protein_coding protein_coding MGP_NODShiLtJ_T0038198.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15462236 15465769 + Kat6b protein_coding retained_intron MGP_NODShiLtJ_T0038199.1 MGP_NODShiLtJ_G0020886.1 mouse_genomes_project 14 15462720 15474799 + Kat6b protein_coding retained_intron MGP_NODShiLtJ_T0012906.1 MGP_NODShiLtJ_G0011014.1 mouse_genomes_project 14 70510883 70511868 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002572.1 MGP_NODShiLtJ_G0002465.1 mouse_genomes_project 14 50164712 50165244 + MGP_NODShiLtJ_P0002572 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0038609.1 MGP_NODShiLtJ_G0020980.1 mouse_genomes_project 14 26943047 26945460 - MGP_NODShiLtJ_P0038609 Slc18a3 protein_coding protein_coding MGP_NODShiLtJ_T0040159.1 MGP_NODShiLtJ_G0021517.1 mouse_genomes_project 14 135623272 136002835 - MGP_NODShiLtJ_P0040159 Nalcn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040160.1 MGP_NODShiLtJ_G0021517.1 mouse_genomes_project 14 135623282 136031686 - MGP_NODShiLtJ_P0040160 Nalcn protein_coding protein_coding MGP_NODShiLtJ_T0002555.1 MGP_NODShiLtJ_G0002450.1 mouse_genomes_project 14 49737423 49737932 + MGP_NODShiLtJ_P0002555 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002482.1 MGP_NODShiLtJ_G0002385.1 mouse_genomes_project 14 51514700 51514766 + MGP_NODShiLtJ_P0002482 Traj32 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0017286.1 MGP_NODShiLtJ_G0015153.1 mouse_genomes_project 14 130007076 130009604 + Gm4675 processed_transcript processed_transcript MGP_NODShiLtJ_T0017287.1 MGP_NODShiLtJ_G0015153.1 mouse_genomes_project 14 130007724 130033542 + Gm4675 processed_transcript processed_transcript MGP_NODShiLtJ_T0017288.1 MGP_NODShiLtJ_G0015153.1 mouse_genomes_project 14 130026058 130026601 + Gm4675 processed_transcript processed_transcript MGP_NODShiLtJ_T0006677.1 MGP_NODShiLtJ_G0005509.1 mouse_genomes_project 14 132402575 132407289 - Gm26679 lincRNA lincRNA MGP_NODShiLtJ_T0009902.1 MGP_NODShiLtJ_G0008035.1 mouse_genomes_project 14 58257269 58257379 - Mir719 miRNA miRNA MGP_NODShiLtJ_T0100135.1 MGP_NODShiLtJ_G0038529.1 mouse_genomes_project 14 109272584 109272716 - Gm22347 snoRNA snoRNA MGP_NODShiLtJ_T0038952.1 MGP_NODShiLtJ_G0021112.1 mouse_genomes_project 14 47917423 47919477 + MGP_NODShiLtJ_P0038952 Rnase6 protein_coding protein_coding MGP_NODShiLtJ_T0009895.1 MGP_NODShiLtJ_G0008028.1 mouse_genomes_project 14 46053034 46053139 - Gm22949 miRNA miRNA MGP_NODShiLtJ_T0039783.1 MGP_NODShiLtJ_G0021384.1 mouse_genomes_project 14 69174446 69179171 + MGP_NODShiLtJ_P0039783 Nudt18 protein_coding protein_coding MGP_NODShiLtJ_T0039667.1 MGP_NODShiLtJ_G0021339.1 mouse_genomes_project 14 65372908 65375051 + MGP_NODShiLtJ_P0039667 Gm5464 protein_coding protein_coding MGP_NODShiLtJ_T0002473.1 MGP_NODShiLtJ_G0002376.1 mouse_genomes_project 14 51504406 51504470 + MGP_NODShiLtJ_P0002473 Traj42 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0100129.1 MGP_NODShiLtJ_G0038523.1 mouse_genomes_project 14 102897989 102898081 + Gm24770 snoRNA snoRNA MGP_NODShiLtJ_T0002478.1 MGP_NODShiLtJ_G0002381.1 mouse_genomes_project 14 51510147 51510207 + MGP_NODShiLtJ_P0002478 Traj37 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0012929.1 MGP_NODShiLtJ_G0011037.1 mouse_genomes_project 14 136106774 136106988 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039753.1 MGP_NODShiLtJ_G0021373.1 mouse_genomes_project 14 68752309 68781412 - MGP_NODShiLtJ_P0039753 Sorbs3 protein_coding protein_coding MGP_NODShiLtJ_T0039754.1 MGP_NODShiLtJ_G0021373.1 mouse_genomes_project 14 68753011 68779848 - MGP_NODShiLtJ_P0039754 Sorbs3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006647.1 MGP_NODShiLtJ_G0005486.1 mouse_genomes_project 14 59755449 59756311 + Gm26916 lincRNA lincRNA MGP_NODShiLtJ_T0003510.1 MGP_NODShiLtJ_G0003186.1 mouse_genomes_project 14 61929893 61935581 - Gm15918 antisense antisense MGP_NODShiLtJ_T0002588.1 MGP_NODShiLtJ_G0002479.1 mouse_genomes_project 14 50498314 50498908 + MGP_NODShiLtJ_P0002588 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002466.1 MGP_NODShiLtJ_G0002370.1 mouse_genomes_project 14 51498513 51498574 + MGP_NODShiLtJ_P0002466 Traj48 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0002467.1 MGP_NODShiLtJ_G0002370.1 mouse_genomes_project 14 51498514 51498574 + Traj48 TR_J_gene processed_transcript MGP_NODShiLtJ_T0038902.1 MGP_NODShiLtJ_G0021083.1 mouse_genomes_project 14 47048388 47049230 + MGP_NODShiLtJ_P0038902 Olfr738 protein_coding protein_coding MGP_NODShiLtJ_T0040064.1 MGP_NODShiLtJ_G0021481.1 mouse_genomes_project 14 121723401 121732005 + MGP_NODShiLtJ_P0040064 Slitrk5 protein_coding protein_coding MGP_NODShiLtJ_T0011265.1 MGP_NODShiLtJ_G0009398.1 mouse_genomes_project 14 59755129 59755243 + Gm27845 misc_RNA misc_RNA MGP_NODShiLtJ_T0038036.1 MGP_NODShiLtJ_G0020833.1 mouse_genomes_project 14 6198667 6563322 + MGP_NODShiLtJ_P0038036 Synpr protein_coding protein_coding MGP_NODShiLtJ_T0038037.1 MGP_NODShiLtJ_G0020833.1 mouse_genomes_project 14 6376894 6506311 + MGP_NODShiLtJ_P0038037 Synpr protein_coding protein_coding MGP_NODShiLtJ_T0038038.1 MGP_NODShiLtJ_G0020833.1 mouse_genomes_project 14 6376920 6511314 + Synpr protein_coding retained_intron MGP_NODShiLtJ_T0038039.1 MGP_NODShiLtJ_G0020833.1 mouse_genomes_project 14 6376993 6563322 + MGP_NODShiLtJ_P0038039 Synpr protein_coding protein_coding MGP_NODShiLtJ_T0038040.1 MGP_NODShiLtJ_G0020833.1 mouse_genomes_project 14 6377007 6558381 + Synpr protein_coding retained_intron MGP_NODShiLtJ_T0039880.1 MGP_NODShiLtJ_G0021410.1 mouse_genomes_project 14 74676603 74701592 + MGP_NODShiLtJ_P0039880 Erich6b protein_coding protein_coding MGP_NODShiLtJ_T0039982.1 MGP_NODShiLtJ_G0021453.1 mouse_genomes_project 14 105603530 105637057 + MGP_NODShiLtJ_P0039982 Bora protein_coding protein_coding MGP_NODShiLtJ_T0039548.1 MGP_NODShiLtJ_G0021293.1 mouse_genomes_project 14 61298147 61305974 + MGP_NODShiLtJ_P0039548 Defb43 protein_coding protein_coding MGP_NODShiLtJ_T0012893.1 MGP_NODShiLtJ_G0011001.1 mouse_genomes_project 14 51664536 51665220 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039547.1 MGP_NODShiLtJ_G0021292.1 mouse_genomes_project 14 61284525 61287481 + MGP_NODShiLtJ_P0039547 Defb47 protein_coding protein_coding MGP_NODShiLtJ_T0039876.1 MGP_NODShiLtJ_G0021409.1 mouse_genomes_project 14 74613665 74623630 - MGP_NODShiLtJ_P0039876 Spert protein_coding protein_coding MGP_NODShiLtJ_T0039877.1 MGP_NODShiLtJ_G0021409.1 mouse_genomes_project 14 74613665 74624762 - MGP_NODShiLtJ_P0039877 Spert protein_coding protein_coding MGP_NODShiLtJ_T0039878.1 MGP_NODShiLtJ_G0021409.1 mouse_genomes_project 14 74613665 74624762 - MGP_NODShiLtJ_P0039878 Spert protein_coding protein_coding MGP_NODShiLtJ_T0039879.1 MGP_NODShiLtJ_G0021409.1 mouse_genomes_project 14 74613665 74623630 - MGP_NODShiLtJ_P0039879 Spert protein_coding protein_coding MGP_NODShiLtJ_T0039409.1 MGP_NODShiLtJ_G0021242.1 mouse_genomes_project 14 54765783 54771874 - MGP_NODShiLtJ_P0039409 Gjb2 protein_coding protein_coding MGP_NODShiLtJ_T0038588.1 MGP_NODShiLtJ_G0020975.1 mouse_genomes_project 14 26651844 26675374 - MGP_NODShiLtJ_P0038588 protein_coding protein_coding MGP_NODShiLtJ_T0038589.1 MGP_NODShiLtJ_G0020975.1 mouse_genomes_project 14 26652183 26675345 - MGP_NODShiLtJ_P0038589 protein_coding protein_coding MGP_NODShiLtJ_T0038590.1 MGP_NODShiLtJ_G0020975.1 mouse_genomes_project 14 26652362 26675322 - MGP_NODShiLtJ_P0038590 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0038591.1 MGP_NODShiLtJ_G0020975.1 mouse_genomes_project 14 26664712 26675304 - protein_coding retained_intron MGP_NODShiLtJ_T0038592.1 MGP_NODShiLtJ_G0020975.1 mouse_genomes_project 14 26667117 26675329 - protein_coding retained_intron MGP_NODShiLtJ_T0038593.1 MGP_NODShiLtJ_G0020975.1 mouse_genomes_project 14 26672295 26675355 - protein_coding retained_intron MGP_NODShiLtJ_T0017247.1 MGP_NODShiLtJ_G0015136.1 mouse_genomes_project 14 58788 87432 + Gm16741 processed_transcript processed_transcript MGP_NODShiLtJ_T0003499.1 MGP_NODShiLtJ_G0003179.1 mouse_genomes_project 14 53011582 53022632 - Gm15932 antisense antisense MGP_NODShiLtJ_T0009912.1 MGP_NODShiLtJ_G0008045.1 mouse_genomes_project 14 66432180 66432290 - Mir6539 miRNA miRNA MGP_NODShiLtJ_T0039649.1 MGP_NODShiLtJ_G0021334.1 mouse_genomes_project 14 64766040 64780442 + MGP_NODShiLtJ_P0039649 Trim35 protein_coding protein_coding MGP_NODShiLtJ_T0039650.1 MGP_NODShiLtJ_G0021334.1 mouse_genomes_project 14 64766099 64777315 + MGP_NODShiLtJ_P0039650 Trim35 protein_coding protein_coding MGP_NODShiLtJ_T0038375.1 MGP_NODShiLtJ_G0020933.1 mouse_genomes_project 14 24236685 24252844 + MGP_NODShiLtJ_P0038375 Actr8 protein_coding protein_coding MGP_NODShiLtJ_T0038376.1 MGP_NODShiLtJ_G0020933.1 mouse_genomes_project 14 24236727 24252727 + MGP_NODShiLtJ_P0038376 Actr8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009922.1 MGP_NODShiLtJ_G0008055.1 mouse_genomes_project 14 110051741 110051825 - Mir5130 miRNA miRNA MGP_NODShiLtJ_T0002608.1 MGP_NODShiLtJ_G0002495.1 mouse_genomes_project 14 51071177 51071784 + MGP_NODShiLtJ_P0002608 B230359F08Rik TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012900.1 MGP_NODShiLtJ_G0011008.1 mouse_genomes_project 14 58172277 58172625 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039925.1 MGP_NODShiLtJ_G0021427.1 mouse_genomes_project 14 77569942 77600867 - MGP_NODShiLtJ_P0039925 Tnfsf11 protein_coding protein_coding MGP_NODShiLtJ_T0098277.1 MGP_NODShiLtJ_G0036685.1 mouse_genomes_project 14 133360972 133366299 + B930095G15Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0038231.1 MGP_NODShiLtJ_G0020893.1 mouse_genomes_project 14 15878524 17042645 + MGP_NODShiLtJ_P0038231 1700112E06Rik protein_coding protein_coding MGP_NODShiLtJ_T0038232.1 MGP_NODShiLtJ_G0020893.1 mouse_genomes_project 14 15878633 16752958 + MGP_NODShiLtJ_P0038232 1700112E06Rik protein_coding protein_coding MGP_NODShiLtJ_T0038233.1 MGP_NODShiLtJ_G0020893.1 mouse_genomes_project 14 15878660 17042645 + MGP_NODShiLtJ_P0038233 1700112E06Rik protein_coding protein_coding MGP_NODShiLtJ_T0038234.1 MGP_NODShiLtJ_G0020893.1 mouse_genomes_project 14 15878660 16627960 + MGP_NODShiLtJ_P0038234 1700112E06Rik protein_coding protein_coding MGP_NODShiLtJ_T0038235.1 MGP_NODShiLtJ_G0020893.1 mouse_genomes_project 14 16192067 16471935 + 1700112E06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0038236.1 MGP_NODShiLtJ_G0020893.1 mouse_genomes_project 14 16465235 16489141 + 1700112E06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0038752.1 MGP_NODShiLtJ_G0021038.1 mouse_genomes_project 14 41290179 41329431 - MGP_NODShiLtJ_P0038752 Ero1l protein_coding protein_coding MGP_NODShiLtJ_T0017269.1 MGP_NODShiLtJ_G0015147.1 mouse_genomes_project 14 75804476 75818974 + 1700108F19Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017270.1 MGP_NODShiLtJ_G0015147.1 mouse_genomes_project 14 75809083 75818897 + 1700108F19Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017271.1 MGP_NODShiLtJ_G0015147.1 mouse_genomes_project 14 75809096 75811348 + 1700108F19Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017272.1 MGP_NODShiLtJ_G0015147.1 mouse_genomes_project 14 75809096 75818913 + 1700108F19Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017273.1 MGP_NODShiLtJ_G0015147.1 mouse_genomes_project 14 75809124 75818900 + 1700108F19Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017274.1 MGP_NODShiLtJ_G0015147.1 mouse_genomes_project 14 75809127 75811906 + 1700108F19Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017275.1 MGP_NODShiLtJ_G0015147.1 mouse_genomes_project 14 75809171 75811906 + 1700108F19Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017276.1 MGP_NODShiLtJ_G0015147.1 mouse_genomes_project 14 75813271 75818692 + 1700108F19Rik processed_transcript lincRNA MGP_NODShiLtJ_T0002447.1 MGP_NODShiLtJ_G0002354.1 mouse_genomes_project 14 51455050 51455066 + MGP_NODShiLtJ_P0002447 Trdd2 TR_D_gene TR_D_gene MGP_NODShiLtJ_T0040052.1 MGP_NODShiLtJ_G0021475.1 mouse_genomes_project 14 112580985 112641395 + MGP_NODShiLtJ_P0040052 Ndfip2 protein_coding protein_coding MGP_NODShiLtJ_T0040053.1 MGP_NODShiLtJ_G0021475.1 mouse_genomes_project 14 112581130 112641401 + MGP_NODShiLtJ_P0040053 Ndfip2 protein_coding protein_coding MGP_NODShiLtJ_T0040054.1 MGP_NODShiLtJ_G0021475.1 mouse_genomes_project 14 112581230 112616688 + Ndfip2 protein_coding retained_intron MGP_NODShiLtJ_T0040055.1 MGP_NODShiLtJ_G0021475.1 mouse_genomes_project 14 112614026 112640968 + Ndfip2 protein_coding retained_intron MGP_NODShiLtJ_T0040056.1 MGP_NODShiLtJ_G0021475.1 mouse_genomes_project 14 112614422 112640902 + Ndfip2 protein_coding retained_intron MGP_NODShiLtJ_T0040057.1 MGP_NODShiLtJ_G0021475.1 mouse_genomes_project 14 112616287 112640968 + Ndfip2 protein_coding processed_transcript MGP_NODShiLtJ_T0002619.1 MGP_NODShiLtJ_G0002502.1 mouse_genomes_project 14 51272425 51273075 + MGP_NODShiLtJ_P0002619 Trdv2-2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002613.1 MGP_NODShiLtJ_G0002498.1 mouse_genomes_project 14 51135906 51136500 + MGP_NODShiLtJ_P0002613 Trav19 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0100143.1 MGP_NODShiLtJ_G0038537.1 mouse_genomes_project 14 130587141 130587272 + Gm22379 snoRNA snoRNA MGP_NODShiLtJ_T0100108.1 MGP_NODShiLtJ_G0038502.1 mouse_genomes_project 14 55424616 55424745 + Gm26440 snoRNA snoRNA MGP_NODShiLtJ_T0012919.1 MGP_NODShiLtJ_G0011027.1 mouse_genomes_project 14 106249826 106250738 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039339.1 MGP_NODShiLtJ_G0021198.1 mouse_genomes_project 14 53114153 53123792 - MGP_NODShiLtJ_P0039339 Nedd8 protein_coding protein_coding MGP_NODShiLtJ_T0039340.1 MGP_NODShiLtJ_G0021198.1 mouse_genomes_project 14 53114155 53123825 - MGP_NODShiLtJ_P0039340 Nedd8 protein_coding protein_coding MGP_NODShiLtJ_T0039791.1 MGP_NODShiLtJ_G0021389.1 mouse_genomes_project 14 69260088 69379768 - MGP_NODShiLtJ_P0039791 Xpo7 protein_coding protein_coding MGP_NODShiLtJ_T0039792.1 MGP_NODShiLtJ_G0021389.1 mouse_genomes_project 14 69260088 69379768 - MGP_NODShiLtJ_P0039792 Xpo7 protein_coding protein_coding MGP_NODShiLtJ_T0017266.1 MGP_NODShiLtJ_G0015144.1 mouse_genomes_project 14 65870541 65943522 - 4930438E09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0038707.1 MGP_NODShiLtJ_G0021019.1 mouse_genomes_project 14 32023320 32043918 + MGP_NODShiLtJ_P0038707 Lrit1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0038708.1 MGP_NODShiLtJ_G0021019.1 mouse_genomes_project 14 32035373 32046245 + MGP_NODShiLtJ_P0038708 Lrit1 protein_coding protein_coding MGP_NODShiLtJ_T0006616.1 MGP_NODShiLtJ_G0005462.1 mouse_genomes_project 14 26946762 26965257 + Gm2990 lincRNA lincRNA MGP_NODShiLtJ_T0039204.1 MGP_NODShiLtJ_G0021173.1 mouse_genomes_project 14 52379521 52379612 + MGP_NODShiLtJ_P0039204 Gm17428 protein_coding protein_coding MGP_NODShiLtJ_T0039891.1 MGP_NODShiLtJ_G0021416.1 mouse_genomes_project 14 75167666 75194866 - MGP_NODShiLtJ_P0039891 Gpalpp1 protein_coding protein_coding MGP_NODShiLtJ_T0002560.1 MGP_NODShiLtJ_G0002454.1 mouse_genomes_project 14 49822676 50210071 + MGP_NODShiLtJ_P0002560 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012869.1 MGP_NODShiLtJ_G0010977.1 mouse_genomes_project 14 23414442 23414934 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0038552.1 MGP_NODShiLtJ_G0020967.1 mouse_genomes_project 14 26051597 26077685 + Btd protein_coding processed_transcript MGP_NODShiLtJ_T0038553.1 MGP_NODShiLtJ_G0020967.1 mouse_genomes_project 14 26051626 26079093 + MGP_NODShiLtJ_P0038553 Btd protein_coding protein_coding MGP_NODShiLtJ_T0098835.1 MGP_NODShiLtJ_G0037229.1 mouse_genomes_project 14 28208211 28208318 + Gm26228 snRNA snRNA MGP_NODShiLtJ_T0038803.1 MGP_NODShiLtJ_G0021054.1 mouse_genomes_project 14 43498222 43526242 + MGP_NODShiLtJ_P0038803 Mapk1ip1l protein_coding protein_coding MGP_NODShiLtJ_T0039092.1 MGP_NODShiLtJ_G0021140.1 mouse_genomes_project 14 51566108 51584767 - MGP_NODShiLtJ_P0039092 Dad1 protein_coding protein_coding MGP_NODShiLtJ_T0039093.1 MGP_NODShiLtJ_G0021140.1 mouse_genomes_project 14 51570297 51584577 - MGP_NODShiLtJ_P0039093 Dad1 protein_coding protein_coding MGP_NODShiLtJ_T0039494.1 MGP_NODShiLtJ_G0021268.1 mouse_genomes_project 14 58110447 58124212 + MGP_NODShiLtJ_P0039494 4930563I02Rik protein_coding protein_coding MGP_NODShiLtJ_T0039495.1 MGP_NODShiLtJ_G0021268.1 mouse_genomes_project 14 58110893 58124222 + MGP_NODShiLtJ_P0039495 4930563I02Rik protein_coding protein_coding MGP_NODShiLtJ_T0006640.1 MGP_NODShiLtJ_G0005480.1 mouse_genomes_project 14 53337473 53347906 - Gm26751 lincRNA lincRNA MGP_NODShiLtJ_T0009928.1 MGP_NODShiLtJ_G0008061.1 mouse_genomes_project 14 126244632 126244728 + Mir18 miRNA miRNA MGP_NODShiLtJ_T0039010.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49092838 49151401 + MGP_NODShiLtJ_P0039010 Rpgrip1 protein_coding protein_coding MGP_NODShiLtJ_T0039011.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49093038 49150541 + MGP_NODShiLtJ_P0039011 Rpgrip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039012.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49093057 49101344 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039013.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49093064 49149521 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039014.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49093074 49151433 + MGP_NODShiLtJ_P0039014 Rpgrip1 protein_coding protein_coding MGP_NODShiLtJ_T0039015.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49094327 49150311 + MGP_NODShiLtJ_P0039015 Rpgrip1 protein_coding protein_coding MGP_NODShiLtJ_T0039016.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49096726 49118473 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039017.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49099442 49100015 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039018.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49101566 49130243 + MGP_NODShiLtJ_P0039018 Rpgrip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039019.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49123758 49138780 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039020.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49123803 49151432 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039021.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49134972 49138682 + MGP_NODShiLtJ_P0039021 Rpgrip1 protein_coding protein_coding MGP_NODShiLtJ_T0039022.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49135032 49139899 + MGP_NODShiLtJ_P0039022 Rpgrip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039023.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49136609 49138875 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039024.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49138896 49150389 + MGP_NODShiLtJ_P0039024 Rpgrip1 protein_coding protein_coding MGP_NODShiLtJ_T0039025.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49138979 49140103 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039026.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49139845 49150233 + MGP_NODShiLtJ_P0039026 Rpgrip1 protein_coding protein_coding MGP_NODShiLtJ_T0039027.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49141422 49145520 + Rpgrip1 protein_coding retained_intron MGP_NODShiLtJ_T0039028.1 MGP_NODShiLtJ_G0021126.1 mouse_genomes_project 14 49148546 49153640 + MGP_NODShiLtJ_P0039028 Rpgrip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100138.1 MGP_NODShiLtJ_G0038532.1 mouse_genomes_project 14 114010453 114010560 - Gm24634 snoRNA snoRNA MGP_NODShiLtJ_T0100136.1 MGP_NODShiLtJ_G0038530.1 mouse_genomes_project 14 111868762 111868879 - Gm25724 snoRNA snoRNA MGP_NODShiLtJ_T0039248.1 MGP_NODShiLtJ_G0021185.1 mouse_genomes_project 14 53004304 53004769 - MGP_NODShiLtJ_P0039248 A730061H03Rik protein_coding protein_coding MGP_NODShiLtJ_T0039585.1 MGP_NODShiLtJ_G0021308.1 mouse_genomes_project 14 62324100 62369050 + MGP_NODShiLtJ_P0039585 Rp1l1 protein_coding protein_coding MGP_NODShiLtJ_T0039072.1 MGP_NODShiLtJ_G0021132.1 mouse_genomes_project 14 49307311 49312466 - Sall2 protein_coding processed_transcript MGP_NODShiLtJ_T0039073.1 MGP_NODShiLtJ_G0021132.1 mouse_genomes_project 14 49307311 49327058 - MGP_NODShiLtJ_P0039073 Sall2 protein_coding protein_coding MGP_NODShiLtJ_T0039699.1 MGP_NODShiLtJ_G0021348.1 mouse_genomes_project 14 66666679 66717511 - MGP_NODShiLtJ_P0039699 Nefm protein_coding protein_coding MGP_NODShiLtJ_T0039701.1 MGP_NODShiLtJ_G0021348.1 mouse_genomes_project 14 66712010 66717511 - MGP_NODShiLtJ_P0039701 Nefm protein_coding protein_coding MGP_NODShiLtJ_T0038846.1 MGP_NODShiLtJ_G0021060.1 mouse_genomes_project 14 44427824 44570825 + MGP_NODShiLtJ_P0038846 Peli2 protein_coding protein_coding MGP_NODShiLtJ_T0040003.1 MGP_NODShiLtJ_G0021461.1 mouse_genomes_project 14 108526146 108574042 + MGP_NODShiLtJ_P0040003 Uchl3 protein_coding protein_coding MGP_NODShiLtJ_T0039755.1 MGP_NODShiLtJ_G0021374.1 mouse_genomes_project 14 68791796 68866932 - MGP_NODShiLtJ_P0039755 Ppp3cc protein_coding protein_coding MGP_NODShiLtJ_T0039956.1 MGP_NODShiLtJ_G0021443.1 mouse_genomes_project 14 79498536 79521000 + MGP_NODShiLtJ_P0039956 Olfm4 protein_coding protein_coding MGP_NODShiLtJ_T0039957.1 MGP_NODShiLtJ_G0021443.1 mouse_genomes_project 14 79498559 79521000 + MGP_NODShiLtJ_P0039957 Olfm4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012892.1 MGP_NODShiLtJ_G0011000.1 mouse_genomes_project 14 51652142 51652468 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009907.1 MGP_NODShiLtJ_G0008040.1 mouse_genomes_project 14 62054887 62054966 + Mir598 miRNA miRNA MGP_NODShiLtJ_T0038335.1 MGP_NODShiLtJ_G0020916.1 mouse_genomes_project 14 20522959 20576629 + MGP_NODShiLtJ_P0038335 Dennd6a protein_coding protein_coding MGP_NODShiLtJ_T0038336.1 MGP_NODShiLtJ_G0020916.1 mouse_genomes_project 14 20522976 20582595 + MGP_NODShiLtJ_P0038336 Dennd6a protein_coding protein_coding MGP_NODShiLtJ_T0000884.1 MGP_NODShiLtJ_G0000813.1 mouse_genomes_project 14 15787459 15807725 + TEC TEC MGP_NODShiLtJ_T0012862.1 MGP_NODShiLtJ_G0010970.1 mouse_genomes_project 14 19951950 19952197 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017256.1 MGP_NODShiLtJ_G0015139.1 mouse_genomes_project 14 40905203 40912003 - 4930431P03Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017257.1 MGP_NODShiLtJ_G0015139.1 mouse_genomes_project 14 40906403 40912003 - 4930431P03Rik processed_transcript antisense MGP_NODShiLtJ_T0002509.1 MGP_NODShiLtJ_G0002412.1 mouse_genomes_project 14 51547259 51547325 + MGP_NODShiLtJ_P0002509 Traj2 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0038710.1 MGP_NODShiLtJ_G0021021.1 mouse_genomes_project 14 32060075 32080454 - MGP_NODShiLtJ_P0038710 Cdhr1 protein_coding protein_coding MGP_NODShiLtJ_T0002621.1 MGP_NODShiLtJ_G0002504.1 mouse_genomes_project 14 51404385 51404996 + MGP_NODShiLtJ_P0002621 Trdv4 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039335.1 MGP_NODShiLtJ_G0021196.1 mouse_genomes_project 14 53101427 53103785 + MGP_NODShiLtJ_P0039335 Tssk4 protein_coding protein_coding MGP_NODShiLtJ_T0039336.1 MGP_NODShiLtJ_G0021196.1 mouse_genomes_project 14 53101429 53103785 + MGP_NODShiLtJ_P0039336 Tssk4 protein_coding protein_coding MGP_NODShiLtJ_T0039337.1 MGP_NODShiLtJ_G0021196.1 mouse_genomes_project 14 53101594 53103694 + MGP_NODShiLtJ_P0039337 Tssk4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009933.1 MGP_NODShiLtJ_G0008066.1 mouse_genomes_project 14 129677085 129677190 - Mir6239 miRNA miRNA MGP_NODShiLtJ_T0006659.1 MGP_NODShiLtJ_G0005494.1 mouse_genomes_project 14 68262345 68277292 + 4930480K23Rik lincRNA lincRNA MGP_NODShiLtJ_T0006660.1 MGP_NODShiLtJ_G0005494.1 mouse_genomes_project 14 68262395 68296991 + 4930480K23Rik lincRNA lincRNA MGP_NODShiLtJ_T0098836.1 MGP_NODShiLtJ_G0037230.1 mouse_genomes_project 14 31710851 31710957 + Gm25204 snRNA snRNA MGP_NODShiLtJ_T0038126.1 MGP_NODShiLtJ_G0020863.1 mouse_genomes_project 14 13982395 13988771 - MGP_NODShiLtJ_P0038126 Kcnk16 protein_coding protein_coding MGP_NODShiLtJ_T0038011.1 MGP_NODShiLtJ_G0020825.1 mouse_genomes_project 14 700222 732214 - MGP_NODShiLtJ_P0038011 Oit1 protein_coding protein_coding MGP_NODShiLtJ_T0000888.1 MGP_NODShiLtJ_G0000817.1 mouse_genomes_project 14 47709119 47710568 - TEC TEC MGP_NODShiLtJ_T0003463.1 MGP_NODShiLtJ_G0003152.1 mouse_genomes_project 14 14118040 14118612 + 7330404K18Rik antisense antisense MGP_NODShiLtJ_T0039216.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52508405 52516361 - MGP_NODShiLtJ_P0039216 Ap1g2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039217.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52508677 52509216 - Ap1g2 protein_coding retained_intron MGP_NODShiLtJ_T0039218.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52508677 52516094 - MGP_NODShiLtJ_P0039218 Ap1g2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039219.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52508677 52516375 - MGP_NODShiLtJ_P0039219 Ap1g2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039220.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52508677 52516420 - MGP_NODShiLtJ_P0039220 Ap1g2 protein_coding protein_coding MGP_NODShiLtJ_T0039221.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52508682 52515974 - MGP_NODShiLtJ_P0039221 Ap1g2 protein_coding protein_coding MGP_NODShiLtJ_T0039222.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52508881 52515959 - Ap1g2 protein_coding processed_transcript MGP_NODShiLtJ_T0039223.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52510262 52510615 - Ap1g2 protein_coding retained_intron MGP_NODShiLtJ_T0039224.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52512176 52514337 - Ap1g2 protein_coding retained_intron MGP_NODShiLtJ_T0039225.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52512459 52514718 - Ap1g2 protein_coding retained_intron MGP_NODShiLtJ_T0039226.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52515532 52516388 - Ap1g2 protein_coding retained_intron MGP_NODShiLtJ_T0039227.1 MGP_NODShiLtJ_G0021177.1 mouse_genomes_project 14 52515751 52516335 - Ap1g2 protein_coding processed_transcript MGP_NODShiLtJ_T0012910.1 MGP_NODShiLtJ_G0011018.1 mouse_genomes_project 14 73696848 73710610 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0039918.1 MGP_NODShiLtJ_G0021423.1 mouse_genomes_project 14 77033757 77038984 - MGP_NODShiLtJ_P0039918 Gm1587 protein_coding protein_coding MGP_NODShiLtJ_T0039489.1 MGP_NODShiLtJ_G0021267.1 mouse_genomes_project 14 57648413 58202192 - MGP_NODShiLtJ_P0039489 Atp8a2 protein_coding protein_coding MGP_NODShiLtJ_T0039490.1 MGP_NODShiLtJ_G0021267.1 mouse_genomes_project 14 58046215 58109015 - MGP_NODShiLtJ_P0039490 Atp8a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0039491.1 MGP_NODShiLtJ_G0021267.1 mouse_genomes_project 14 58062948 58224544 - MGP_NODShiLtJ_P0039491 Atp8a2 protein_coding protein_coding MGP_NODShiLtJ_T0039492.1 MGP_NODShiLtJ_G0021267.1 mouse_genomes_project 14 58108714 58202344 - MGP_NODShiLtJ_P0039492 Atp8a2 protein_coding protein_coding MGP_NODShiLtJ_T0039493.1 MGP_NODShiLtJ_G0021267.1 mouse_genomes_project 14 58108773 58110732 - MGP_NODShiLtJ_P0039493 Atp8a2 protein_coding protein_coding MGP_NODShiLtJ_T0039496.1 MGP_NODShiLtJ_G0021267.1 mouse_genomes_project 14 58211808 58224508 - Atp8a2 protein_coding processed_transcript MGP_NODShiLtJ_T0038975.1 MGP_NODShiLtJ_G0021118.1 mouse_genomes_project 14 48853120 48861354 - MGP_NODShiLtJ_P0038975 Ndrg2 protein_coding protein_coding MGP_NODShiLtJ_T0038976.1 MGP_NODShiLtJ_G0021118.1 mouse_genomes_project 14 48853120 48861354 - MGP_NODShiLtJ_P0038976 Ndrg2 protein_coding protein_coding MGP_NODShiLtJ_T0039244.1 MGP_NODShiLtJ_G0021183.1 mouse_genomes_project 14 52959789 52964989 - MGP_NODShiLtJ_P0039244 Nrl protein_coding protein_coding MGP_NODShiLtJ_T0039245.1 MGP_NODShiLtJ_G0021183.1 mouse_genomes_project 14 52960337 52965779 - MGP_NODShiLtJ_P0039245 Nrl protein_coding protein_coding MGP_NODShiLtJ_T0039246.1 MGP_NODShiLtJ_G0021183.1 mouse_genomes_project 14 52960337 52965763 - MGP_NODShiLtJ_P0039246 Nrl protein_coding protein_coding MGP_NODShiLtJ_T0039704.1 MGP_NODShiLtJ_G0021351.1 mouse_genomes_project 14 67193237 67217288 - MGP_NODShiLtJ_P0039704 Adamdec1 protein_coding protein_coding MGP_NODShiLtJ_T0039305.1 MGP_NODShiLtJ_G0021193.1 mouse_genomes_project 14 53069357 53076668 + MGP_NODShiLtJ_P0039305 Rec8 protein_coding protein_coding MGP_NODShiLtJ_T0039306.1 MGP_NODShiLtJ_G0021193.1 mouse_genomes_project 14 53069503 53070137 + Rec8 protein_coding retained_intron MGP_NODShiLtJ_T0039307.1 MGP_NODShiLtJ_G0021193.1 mouse_genomes_project 14 53074841 53075783 + Rec8 protein_coding retained_intron MGP_NODShiLtJ_T0039308.1 MGP_NODShiLtJ_G0021193.1 mouse_genomes_project 14 53076191 53076668 + Rec8 protein_coding retained_intron MGP_NODShiLtJ_T0039966.1 MGP_NODShiLtJ_G0021447.1 mouse_genomes_project 14 90441306 90448782 - MGP_NODShiLtJ_P0039966 Pcdh20 protein_coding protein_coding MGP_NODShiLtJ_T0039967.1 MGP_NODShiLtJ_G0021447.1 mouse_genomes_project 14 90444255 90448732 - MGP_NODShiLtJ_P0039967 Pcdh20 protein_coding protein_coding MGP_NODShiLtJ_T0002577.1 MGP_NODShiLtJ_G0002469.1 mouse_genomes_project 14 50250064 50250614 + MGP_NODShiLtJ_P0002577 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0039136.1 MGP_NODShiLtJ_G0021151.1 mouse_genomes_project 14 51924446 51935922 - MGP_NODShiLtJ_P0039136 Ajuba protein_coding protein_coding MGP_NODShiLtJ_T0038910.1 MGP_NODShiLtJ_G0021091.1 mouse_genomes_project 14 47339458 47422755 + MGP_NODShiLtJ_P0038910 protein_coding protein_coding MGP_NODShiLtJ_T0006625.1 MGP_NODShiLtJ_G0005470.1 mouse_genomes_project 14 42706713 42712871 - Rubie lincRNA lincRNA MGP_NODShiLtJ_T0038133.1 MGP_NODShiLtJ_G0020867.1 mouse_genomes_project 14 14103098 14107373 - MGP_NODShiLtJ_P0038133 Dnajc9 protein_coding protein_coding MGP_NODShiLtJ_T0038052.1 MGP_NODShiLtJ_G0020840.1 mouse_genomes_project 14 7343078 7350498 + MGP_NODShiLtJ_P0038052 Olfr31 protein_coding protein_coding MGP_NODShiLtJ_T0038053.1 MGP_NODShiLtJ_G0020840.1 mouse_genomes_project 14 7349544 7350498 + MGP_NODShiLtJ_P0038053 Olfr31 protein_coding protein_coding MGP_NODShiLtJ_T0009909.1 MGP_NODShiLtJ_G0008042.1 mouse_genomes_project 14 62944037 62944124 + Mir3078 miRNA miRNA MGP_NODShiLtJ_T0038280.1 MGP_NODShiLtJ_G0020901.1 mouse_genomes_project 14 19851877 19904956 - MGP_NODShiLtJ_P0038280 Zcchc24 protein_coding protein_coding MGP_NODShiLtJ_T0038281.1 MGP_NODShiLtJ_G0020901.1 mouse_genomes_project 14 19851879 19860027 - Zcchc24 protein_coding retained_intron MGP_NODShiLtJ_T0012921.1 MGP_NODShiLtJ_G0011029.1 mouse_genomes_project 14 106891344 106891649 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002596.1 MGP_NODShiLtJ_G0002485.1 mouse_genomes_project 14 50647792 50648258 + MGP_NODShiLtJ_P0002596 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0000909.1 MGP_NODShiLtJ_G0000838.1 mouse_genomes_project 14 126005150 126005414 - TEC TEC MGP_NODShiLtJ_T0039582.1 MGP_NODShiLtJ_G0021305.1 mouse_genomes_project 14 62192223 62251770 + MGP_NODShiLtJ_P0039582 Pinx1 protein_coding protein_coding MGP_NODShiLtJ_T0006607.1 MGP_NODShiLtJ_G0005458.1 mouse_genomes_project 14 20274707 20311225 + 4933413J09Rik lincRNA lincRNA MGP_NODShiLtJ_T0006608.1 MGP_NODShiLtJ_G0005458.1 mouse_genomes_project 14 20275680 20328096 + 4933413J09Rik lincRNA lincRNA MGP_NODShiLtJ_T0006609.1 MGP_NODShiLtJ_G0005458.1 mouse_genomes_project 14 20275713 20297398 + 4933413J09Rik lincRNA lincRNA MGP_NODShiLtJ_T0006610.1 MGP_NODShiLtJ_G0005458.1 mouse_genomes_project 14 20280764 20298516 + 4933413J09Rik lincRNA lincRNA MGP_NODShiLtJ_T0006611.1 MGP_NODShiLtJ_G0005458.1 mouse_genomes_project 14 20282521 20298414 + 4933413J09Rik lincRNA lincRNA MGP_NODShiLtJ_T0006612.1 MGP_NODShiLtJ_G0005458.1 mouse_genomes_project 14 20282521 20324282 + 4933413J09Rik lincRNA lincRNA MGP_NODShiLtJ_T0098833.1 MGP_NODShiLtJ_G0037227.1 mouse_genomes_project 14 15664860 15665005 + Gm23502 snRNA snRNA MGP_NODShiLtJ_T0038949.1 MGP_NODShiLtJ_G0021110.1 mouse_genomes_project 14 47857575 47879029 + MGP_NODShiLtJ_P0038949 Rnase4 protein_coding protein_coding MGP_NODShiLtJ_T0038950.1 MGP_NODShiLtJ_G0021110.1 mouse_genomes_project 14 47863116 47879029 + MGP_NODShiLtJ_P0038950 Rnase4 protein_coding protein_coding MGP_NODShiLtJ_T0091718.1 MGP_NODShiLtJ_G0034543.1 mouse_genomes_project 9 49267517 49275609 - MGP_NODShiLtJ_P0091718 Tagln protein_coding protein_coding MGP_NODShiLtJ_T0091270.1 MGP_NODShiLtJ_G0034343.1 mouse_genomes_project 9 37477040 37490443 - MGP_NODShiLtJ_P0091270 Gm27235 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099606.1 MGP_NODShiLtJ_G0038000.1 mouse_genomes_project 9 67884207 67884365 + Gm24526 snRNA snRNA MGP_NODShiLtJ_T0094361.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910361 120951433 - MGP_NODShiLtJ_P0094361 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094362.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910361 120928221 - MGP_NODShiLtJ_P0094362 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094363.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910361 120951841 - MGP_NODShiLtJ_P0094363 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094364.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910361 120951444 - MGP_NODShiLtJ_P0094364 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094365.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910362 120943056 - Dhx30 protein_coding retained_intron MGP_NODShiLtJ_T0094366.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910362 120911033 - MGP_NODShiLtJ_P0094366 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094367.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910362 120949088 - MGP_NODShiLtJ_P0094367 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094368.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910362 120951448 - MGP_NODShiLtJ_P0094368 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094369.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910362 120911092 - MGP_NODShiLtJ_P0094369 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094370.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910363 120951422 - MGP_NODShiLtJ_P0094370 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094371.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910364 120951346 - MGP_NODShiLtJ_P0094371 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094372.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120910559 120911557 - MGP_NODShiLtJ_P0094372 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094373.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120912360 120913496 - Dhx30 protein_coding retained_intron MGP_NODShiLtJ_T0094374.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120913984 120917705 - Dhx30 protein_coding retained_intron MGP_NODShiLtJ_T0094375.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120915912 120943531 - Dhx30 protein_coding retained_intron MGP_NODShiLtJ_T0094376.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120919193 120928173 - MGP_NODShiLtJ_P0094376 Dhx30 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094377.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120919301 120950795 - MGP_NODShiLtJ_P0094377 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094378.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120919343 120928172 - MGP_NODShiLtJ_P0094378 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094379.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120925884 120949317 - MGP_NODShiLtJ_P0094379 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094380.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120925972 120951098 - MGP_NODShiLtJ_P0094380 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094381.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120942109 120951430 - MGP_NODShiLtJ_P0094381 Dhx30 protein_coding protein_coding MGP_NODShiLtJ_T0094382.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120947099 120951442 - Dhx30 protein_coding processed_transcript MGP_NODShiLtJ_T0094383.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120948186 120951385 - Dhx30 protein_coding retained_intron MGP_NODShiLtJ_T0094384.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120949124 120951643 - Dhx30 protein_coding processed_transcript MGP_NODShiLtJ_T0094385.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120949432 120951119 - Dhx30 protein_coding processed_transcript MGP_NODShiLtJ_T0094386.1 MGP_NODShiLtJ_G0035138.1 mouse_genomes_project 9 120949501 120951396 - Dhx30 protein_coding processed_transcript MGP_NODShiLtJ_T0091746.1 MGP_NODShiLtJ_G0034549.1 mouse_genomes_project 9 49585443 49588207 + MGP_NODShiLtJ_P0091746 Apoa4 protein_coding protein_coding MGP_NODShiLtJ_T0091465.1 MGP_NODShiLtJ_G0034463.1 mouse_genomes_project 9 43031273 43054916 + MGP_NODShiLtJ_P0091465 Zfp202 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091466.1 MGP_NODShiLtJ_G0034463.1 mouse_genomes_project 9 43047644 43053181 + MGP_NODShiLtJ_P0091466 Zfp202 protein_coding protein_coding MGP_NODShiLtJ_T0091386.1 MGP_NODShiLtJ_G0034396.1 mouse_genomes_project 9 40565700 40566696 + MGP_NODShiLtJ_P0091386 Olfr250 protein_coding protein_coding MGP_NODShiLtJ_T0009200.1 MGP_NODShiLtJ_G0007387.1 mouse_genomes_project 9 88194551 88214483 + lincRNA lincRNA MGP_NODShiLtJ_T0094320.1 MGP_NODShiLtJ_G0035132.1 mouse_genomes_project 9 120349449 120370594 - MGP_NODShiLtJ_P0094320 Fbxw25 protein_coding protein_coding MGP_NODShiLtJ_T0005405.1 MGP_NODShiLtJ_G0004568.1 mouse_genomes_project 9 72063803 72067946 - BC050972 antisense antisense MGP_NODShiLtJ_T0005406.1 MGP_NODShiLtJ_G0004568.1 mouse_genomes_project 9 72064036 72067646 - BC050972 antisense antisense MGP_NODShiLtJ_T0005407.1 MGP_NODShiLtJ_G0004568.1 mouse_genomes_project 9 72064065 72069446 - BC050972 antisense antisense MGP_NODShiLtJ_T0100922.1 MGP_NODShiLtJ_G0039316.1 mouse_genomes_project 9 118960688 118960797 - Gm25456 snoRNA snoRNA MGP_NODShiLtJ_T0010965.1 MGP_NODShiLtJ_G0009098.1 mouse_genomes_project 9 69176391 69176518 + Gm24106 miRNA miRNA MGP_NODShiLtJ_T0093332.1 MGP_NODShiLtJ_G0034965.1 mouse_genomes_project 9 108697294 108730191 - MGP_NODShiLtJ_P0093332 Gm1123 protein_coding protein_coding MGP_NODShiLtJ_T0002361.1 MGP_NODShiLtJ_G0002270.1 mouse_genomes_project 9 99900031 99902506 - TEC TEC MGP_NODShiLtJ_T0093121.1 MGP_NODShiLtJ_G0034917.1 mouse_genomes_project 9 98002306 98008170 - MGP_NODShiLtJ_P0093121 Tmed3 protein_coding protein_coding MGP_NODShiLtJ_T0093122.1 MGP_NODShiLtJ_G0034917.1 mouse_genomes_project 9 98006346 98007925 - Tmed3 protein_coding retained_intron MGP_NODShiLtJ_T0091038.1 MGP_NODShiLtJ_G0034265.1 mouse_genomes_project 9 22290406 22298105 - MGP_NODShiLtJ_P0091038 Tmem205 protein_coding protein_coding MGP_NODShiLtJ_T0091039.1 MGP_NODShiLtJ_G0034265.1 mouse_genomes_project 9 22290406 22298105 - MGP_NODShiLtJ_P0091039 Tmem205 protein_coding protein_coding MGP_NODShiLtJ_T0018391.1 MGP_NODShiLtJ_G0015614.1 mouse_genomes_project 9 86825839 86826271 + Gm3211 processed_transcript processed_transcript MGP_NODShiLtJ_T0094732.1 MGP_NODShiLtJ_G0035221.1 mouse_genomes_project 9 131410950 131531725 - MGP_NODShiLtJ_P0094732 Scn10a protein_coding protein_coding MGP_NODShiLtJ_T0091456.1 MGP_NODShiLtJ_G0034454.1 mouse_genomes_project 9 42762774 42763710 + MGP_NODShiLtJ_P0091456 Olfr978 protein_coding protein_coding MGP_NODShiLtJ_T0099644.1 MGP_NODShiLtJ_G0038038.1 mouse_genomes_project 9 122005676 122005739 + Gm26409 snRNA snRNA MGP_NODShiLtJ_T0009198.1 MGP_NODShiLtJ_G0007385.1 mouse_genomes_project 9 86053556 86053995 + Gm28620 lincRNA lincRNA MGP_NODShiLtJ_T0010980.1 MGP_NODShiLtJ_G0009113.1 mouse_genomes_project 9 114571598 114571673 + Mir2136 miRNA miRNA MGP_NODShiLtJ_T0009245.1 MGP_NODShiLtJ_G0007422.1 mouse_genomes_project 9 114499228 114529260 + Gm28548 lincRNA lincRNA MGP_NODShiLtJ_T0011641.1 MGP_NODShiLtJ_G0009774.1 mouse_genomes_project 9 132720239 132720560 - Gm23624 misc_RNA misc_RNA MGP_NODShiLtJ_T0092092.1 MGP_NODShiLtJ_G0034661.1 mouse_genomes_project 9 61526839 61537141 - MGP_NODShiLtJ_P0092092 1700017B05Rik protein_coding protein_coding MGP_NODShiLtJ_T0099627.1 MGP_NODShiLtJ_G0038021.1 mouse_genomes_project 9 92325069 92325233 + Gm26126 snRNA snRNA MGP_NODShiLtJ_T0010981.1 MGP_NODShiLtJ_G0009114.1 mouse_genomes_project 9 115206679 115206783 + Gm23391 miRNA miRNA MGP_NODShiLtJ_T0091706.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49189830 49243144 - MGP_NODShiLtJ_P0091706 Rnf214 protein_coding protein_coding MGP_NODShiLtJ_T0091707.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49190096 49243152 - MGP_NODShiLtJ_P0091707 Rnf214 protein_coding protein_coding MGP_NODShiLtJ_T0091708.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49190096 49242682 - MGP_NODShiLtJ_P0091708 Rnf214 protein_coding protein_coding MGP_NODShiLtJ_T0091709.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49190695 49242648 - Rnf214 protein_coding retained_intron MGP_NODShiLtJ_T0091710.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49190704 49243136 - MGP_NODShiLtJ_P0091710 Rnf214 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091711.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49191239 49243169 - MGP_NODShiLtJ_P0091711 Rnf214 protein_coding protein_coding MGP_NODShiLtJ_T0091712.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49195264 49197157 - Rnf214 protein_coding retained_intron MGP_NODShiLtJ_T0091713.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49199306 49207680 - Rnf214 protein_coding retained_intron MGP_NODShiLtJ_T0091714.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49225911 49233651 - Rnf214 protein_coding retained_intron MGP_NODShiLtJ_T0091715.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49226206 49242662 - MGP_NODShiLtJ_P0091715 Rnf214 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091716.1 MGP_NODShiLtJ_G0034541.1 mouse_genomes_project 9 49231208 49236395 - Rnf214 protein_coding retained_intron MGP_NODShiLtJ_T0100885.1 MGP_NODShiLtJ_G0039279.1 mouse_genomes_project 9 47992764 47992899 - Gm24166 snoRNA snoRNA MGP_NODShiLtJ_T0091442.1 MGP_NODShiLtJ_G0034440.1 mouse_genomes_project 9 42309351 42309899 + MGP_NODShiLtJ_P0091442 protein_coding protein_coding MGP_NODShiLtJ_T0005491.1 MGP_NODShiLtJ_G0004629.1 mouse_genomes_project 9 126186999 126189164 + Gm9888 antisense antisense MGP_NODShiLtJ_T0094545.1 MGP_NODShiLtJ_G0035169.1 mouse_genomes_project 9 122213409 122220568 + MGP_NODShiLtJ_P0094545 Epm2aip1 protein_coding protein_coding MGP_NODShiLtJ_T0094546.1 MGP_NODShiLtJ_G0035169.1 mouse_genomes_project 9 122213425 122220572 + MGP_NODShiLtJ_P0094546 Epm2aip1 protein_coding protein_coding MGP_NODShiLtJ_T0094547.1 MGP_NODShiLtJ_G0035169.1 mouse_genomes_project 9 122215582 122219021 + Epm2aip1 protein_coding processed_transcript MGP_NODShiLtJ_T0018434.1 MGP_NODShiLtJ_G0015630.1 mouse_genomes_project 9 128871106 128873239 + Gm17396 processed_transcript processed_transcript MGP_NODShiLtJ_T0015931.1 MGP_NODShiLtJ_G0014039.1 mouse_genomes_project 9 63140779 63140947 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091517.1 MGP_NODShiLtJ_G0034477.1 mouse_genomes_project 9 45586455 46039757 - MGP_NODShiLtJ_P0091517 Grik4 protein_coding protein_coding MGP_NODShiLtJ_T0091518.1 MGP_NODShiLtJ_G0034477.1 mouse_genomes_project 9 45589718 45900441 - MGP_NODShiLtJ_P0091518 Grik4 protein_coding protein_coding MGP_NODShiLtJ_T0018376.1 MGP_NODShiLtJ_G0015607.1 mouse_genomes_project 9 68962809 68965795 - 1700055C04Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0015909.1 MGP_NODShiLtJ_G0014017.1 mouse_genomes_project 9 23164049 23164517 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091588.1 MGP_NODShiLtJ_G0034501.1 mouse_genomes_project 9 47539258 47540642 + MGP_NODShiLtJ_P0091588 H2afx protein_coding protein_coding MGP_NODShiLtJ_T0100875.1 MGP_NODShiLtJ_G0039269.1 mouse_genomes_project 9 35490398 35490529 + Gm25439 snoRNA snoRNA MGP_NODShiLtJ_T0010990.1 MGP_NODShiLtJ_G0009123.1 mouse_genomes_project 9 119433527 119433613 + Gm23156 miRNA miRNA MGP_NODShiLtJ_T0090884.1 MGP_NODShiLtJ_G0034212.1 mouse_genomes_project 9 20381974 20383121 + MGP_NODShiLtJ_P0090884 protein_coding protein_coding MGP_NODShiLtJ_T0092287.1 MGP_NODShiLtJ_G0034716.1 mouse_genomes_project 9 66834544 66847904 - MGP_NODShiLtJ_P0092287 Glce protein_coding protein_coding MGP_NODShiLtJ_T0092288.1 MGP_NODShiLtJ_G0034716.1 mouse_genomes_project 9 66834544 66905498 - MGP_NODShiLtJ_P0092288 Glce protein_coding protein_coding MGP_NODShiLtJ_T0092289.1 MGP_NODShiLtJ_G0034716.1 mouse_genomes_project 9 66837307 66848138 - Glce protein_coding retained_intron MGP_NODShiLtJ_T0092290.1 MGP_NODShiLtJ_G0034716.1 mouse_genomes_project 9 66847765 66905543 - MGP_NODShiLtJ_P0092290 Glce protein_coding protein_coding MGP_NODShiLtJ_T0092291.1 MGP_NODShiLtJ_G0034716.1 mouse_genomes_project 9 66857622 66905497 - Glce protein_coding processed_transcript MGP_NODShiLtJ_T0092363.1 MGP_NODShiLtJ_G0034734.1 mouse_genomes_project 9 69114826 69120016 + MGP_NODShiLtJ_P0092363 Rpl4 protein_coding protein_coding MGP_NODShiLtJ_T0094935.1 MGP_NODShiLtJ_G0035292.1 mouse_genomes_project 9 136757450 136761817 - MGP_NODShiLtJ_P0094935 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094936.1 MGP_NODShiLtJ_G0035292.1 mouse_genomes_project 9 136759717 136759971 - MGP_NODShiLtJ_P0094936 protein_coding protein_coding MGP_NODShiLtJ_T0002366.1 MGP_NODShiLtJ_G0002275.1 mouse_genomes_project 9 100529010 100529835 - TEC TEC MGP_NODShiLtJ_T0099625.1 MGP_NODShiLtJ_G0038019.1 mouse_genomes_project 9 89819633 89819730 - Gm24393 snRNA snRNA MGP_NODShiLtJ_T0005473.1 MGP_NODShiLtJ_G0004614.1 mouse_genomes_project 9 117875561 117876654 - Gm17118 antisense antisense MGP_NODShiLtJ_T0091911.1 MGP_NODShiLtJ_G0034602.1 mouse_genomes_project 9 55849862 55891925 + MGP_NODShiLtJ_P0091911 Rdx protein_coding protein_coding MGP_NODShiLtJ_T0091912.1 MGP_NODShiLtJ_G0034602.1 mouse_genomes_project 9 55850651 55891925 + MGP_NODShiLtJ_P0091912 Rdx protein_coding protein_coding MGP_NODShiLtJ_T0091913.1 MGP_NODShiLtJ_G0034602.1 mouse_genomes_project 9 55850651 55878321 + MGP_NODShiLtJ_P0091913 Rdx protein_coding protein_coding MGP_NODShiLtJ_T0090882.1 MGP_NODShiLtJ_G0034210.1 mouse_genomes_project 9 20311189 20321128 + MGP_NODShiLtJ_P0090882 Olfr869 protein_coding protein_coding MGP_NODShiLtJ_T0091295.1 MGP_NODShiLtJ_G0034356.1 mouse_genomes_project 9 38662929 38688380 - MGP_NODShiLtJ_P0091295 Stt3a protein_coding protein_coding MGP_NODShiLtJ_T0091296.1 MGP_NODShiLtJ_G0034356.1 mouse_genomes_project 9 38663426 38702097 - MGP_NODShiLtJ_P0091296 Stt3a protein_coding protein_coding MGP_NODShiLtJ_T0091297.1 MGP_NODShiLtJ_G0034356.1 mouse_genomes_project 9 38685679 38702062 - MGP_NODShiLtJ_P0091297 Stt3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091298.1 MGP_NODShiLtJ_G0034356.1 mouse_genomes_project 9 38691782 38692786 - Stt3a protein_coding retained_intron MGP_NODShiLtJ_T0091299.1 MGP_NODShiLtJ_G0034356.1 mouse_genomes_project 9 38692205 38701793 - MGP_NODShiLtJ_P0091299 Stt3a protein_coding protein_coding MGP_NODShiLtJ_T0091300.1 MGP_NODShiLtJ_G0034356.1 mouse_genomes_project 9 38697094 38702016 - Stt3a protein_coding retained_intron MGP_NODShiLtJ_T0091301.1 MGP_NODShiLtJ_G0034356.1 mouse_genomes_project 9 38697314 38702059 - Stt3a protein_coding retained_intron MGP_NODShiLtJ_T0092262.1 MGP_NODShiLtJ_G0034709.1 mouse_genomes_project 9 65410445 65430302 + MGP_NODShiLtJ_P0092262 Larp6 protein_coding protein_coding MGP_NODShiLtJ_T0010997.1 MGP_NODShiLtJ_G0009130.1 mouse_genomes_project 9 126841316 126841437 + Mir467h miRNA miRNA MGP_NODShiLtJ_T0090696.1 MGP_NODShiLtJ_G0034131.1 mouse_genomes_project 9 5721492 5742160 - MGP_NODShiLtJ_P0090696 Birc2 protein_coding protein_coding MGP_NODShiLtJ_T0090697.1 MGP_NODShiLtJ_G0034131.1 mouse_genomes_project 9 5721501 5739330 - MGP_NODShiLtJ_P0090697 Birc2 protein_coding protein_coding MGP_NODShiLtJ_T0090698.1 MGP_NODShiLtJ_G0034131.1 mouse_genomes_project 9 5737846 5741908 - Birc2 protein_coding processed_transcript MGP_NODShiLtJ_T0090699.1 MGP_NODShiLtJ_G0034131.1 mouse_genomes_project 9 5741789 5742167 - MGP_NODShiLtJ_P0090699 Birc2 protein_coding protein_coding MGP_NODShiLtJ_T0009195.1 MGP_NODShiLtJ_G0007382.1 mouse_genomes_project 9 83471762 83477022 + Gm19541 lincRNA lincRNA MGP_NODShiLtJ_T0009139.1 MGP_NODShiLtJ_G0007338.1 mouse_genomes_project 9 35563901 35581074 + lincRNA lincRNA MGP_NODShiLtJ_T0092515.1 MGP_NODShiLtJ_G0034779.1 mouse_genomes_project 9 72116308 72198964 - MGP_NODShiLtJ_P0092515 Rab8b protein_coding protein_coding MGP_NODShiLtJ_T0018421.1 MGP_NODShiLtJ_G0015625.1 mouse_genomes_project 9 118536219 118543137 + Gm20529 processed_transcript processed_transcript MGP_NODShiLtJ_T0094416.1 MGP_NODShiLtJ_G0035143.1 mouse_genomes_project 9 121244520 121269640 - MGP_NODShiLtJ_P0094416 Ptpn23 protein_coding protein_coding MGP_NODShiLtJ_T0094417.1 MGP_NODShiLtJ_G0035143.1 mouse_genomes_project 9 121244764 121245688 - MGP_NODShiLtJ_P0094417 Ptpn23 protein_coding protein_coding MGP_NODShiLtJ_T0094418.1 MGP_NODShiLtJ_G0035143.1 mouse_genomes_project 9 121245280 121246090 - Ptpn23 protein_coding retained_intron MGP_NODShiLtJ_T0094419.1 MGP_NODShiLtJ_G0035143.1 mouse_genomes_project 9 121248721 121249946 - Ptpn23 protein_coding retained_intron MGP_NODShiLtJ_T0091433.1 MGP_NODShiLtJ_G0034437.1 mouse_genomes_project 9 42248467 42265226 - MGP_NODShiLtJ_P0091433 AW551984 protein_coding protein_coding MGP_NODShiLtJ_T0091434.1 MGP_NODShiLtJ_G0034437.1 mouse_genomes_project 9 42248581 42264787 - MGP_NODShiLtJ_P0091434 AW551984 protein_coding protein_coding MGP_NODShiLtJ_T0091435.1 MGP_NODShiLtJ_G0034437.1 mouse_genomes_project 9 42250033 42252093 - AW551984 protein_coding retained_intron MGP_NODShiLtJ_T0091436.1 MGP_NODShiLtJ_G0034437.1 mouse_genomes_project 9 42251698 42253343 - AW551984 protein_coding retained_intron MGP_NODShiLtJ_T0091437.1 MGP_NODShiLtJ_G0034437.1 mouse_genomes_project 9 42260746 42265505 - MGP_NODShiLtJ_P0091437 AW551984 protein_coding protein_coding MGP_NODShiLtJ_T0091438.1 MGP_NODShiLtJ_G0034437.1 mouse_genomes_project 9 42261383 42264727 - AW551984 protein_coding retained_intron MGP_NODShiLtJ_T0091439.1 MGP_NODShiLtJ_G0034437.1 mouse_genomes_project 9 42261644 42264477 - MGP_NODShiLtJ_P0091439 AW551984 protein_coding protein_coding MGP_NODShiLtJ_T0094693.1 MGP_NODShiLtJ_G0035209.1 mouse_genomes_project 9 130854637 130877455 + Dlec1 protein_coding retained_intron MGP_NODShiLtJ_T0094694.1 MGP_NODShiLtJ_G0035209.1 mouse_genomes_project 9 130854637 130902245 + MGP_NODShiLtJ_P0094694 Dlec1 protein_coding protein_coding MGP_NODShiLtJ_T0094695.1 MGP_NODShiLtJ_G0035209.1 mouse_genomes_project 9 130854637 130901693 + MGP_NODShiLtJ_P0094695 Dlec1 protein_coding protein_coding MGP_NODShiLtJ_T0094696.1 MGP_NODShiLtJ_G0035209.1 mouse_genomes_project 9 130854668 130888639 + MGP_NODShiLtJ_P0094696 Dlec1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094697.1 MGP_NODShiLtJ_G0035209.1 mouse_genomes_project 9 130871813 130898227 + Dlec1 protein_coding retained_intron MGP_NODShiLtJ_T0094698.1 MGP_NODShiLtJ_G0035209.1 mouse_genomes_project 9 130879173 130880392 + Dlec1 protein_coding retained_intron MGP_NODShiLtJ_T0094699.1 MGP_NODShiLtJ_G0035209.1 mouse_genomes_project 9 130880528 130888637 + Dlec1 protein_coding retained_intron MGP_NODShiLtJ_T0094700.1 MGP_NODShiLtJ_G0035209.1 mouse_genomes_project 9 130880679 130882399 + Dlec1 protein_coding retained_intron MGP_NODShiLtJ_T0094049.1 MGP_NODShiLtJ_G0035087.1 mouse_genomes_project 9 118711174 118779635 - MGP_NODShiLtJ_P0094049 Dag1 protein_coding protein_coding MGP_NODShiLtJ_T0094050.1 MGP_NODShiLtJ_G0035087.1 mouse_genomes_project 9 118712484 118779492 - MGP_NODShiLtJ_P0094050 Dag1 protein_coding protein_coding MGP_NODShiLtJ_T0094051.1 MGP_NODShiLtJ_G0035087.1 mouse_genomes_project 9 118712495 118779595 - MGP_NODShiLtJ_P0094051 Dag1 protein_coding protein_coding MGP_NODShiLtJ_T0094052.1 MGP_NODShiLtJ_G0035087.1 mouse_genomes_project 9 118712498 118779413 - MGP_NODShiLtJ_P0094052 Dag1 protein_coding protein_coding MGP_NODShiLtJ_T0094053.1 MGP_NODShiLtJ_G0035087.1 mouse_genomes_project 9 118724717 118779428 - MGP_NODShiLtJ_P0094053 Dag1 protein_coding protein_coding MGP_NODShiLtJ_T0094054.1 MGP_NODShiLtJ_G0035087.1 mouse_genomes_project 9 118724755 118779386 - MGP_NODShiLtJ_P0094054 Dag1 protein_coding protein_coding MGP_NODShiLtJ_T0094055.1 MGP_NODShiLtJ_G0035087.1 mouse_genomes_project 9 118762006 118779428 - Dag1 protein_coding retained_intron MGP_NODShiLtJ_T0002387.1 MGP_NODShiLtJ_G0002296.1 mouse_genomes_project 9 111147163 111151238 - TEC TEC MGP_NODShiLtJ_T0093267.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106180346 106254632 - MGP_NODShiLtJ_P0093267 Zbtb38 protein_coding protein_coding MGP_NODShiLtJ_T0093268.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106183880 106231998 - MGP_NODShiLtJ_P0093268 Zbtb38 protein_coding protein_coding MGP_NODShiLtJ_T0093269.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106184712 106218925 - MGP_NODShiLtJ_P0093269 Zbtb38 protein_coding non_stop_decay MGP_NODShiLtJ_T0093270.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106185852 106219375 - MGP_NODShiLtJ_P0093270 Zbtb38 protein_coding protein_coding MGP_NODShiLtJ_T0093271.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106186931 106218640 - MGP_NODShiLtJ_P0093271 Zbtb38 protein_coding protein_coding MGP_NODShiLtJ_T0093272.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106217284 106229359 - Zbtb38 protein_coding processed_transcript MGP_NODShiLtJ_T0093273.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106230173 106254486 - Zbtb38 protein_coding retained_intron MGP_NODShiLtJ_T0093274.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106230173 106231664 - Zbtb38 protein_coding processed_transcript MGP_NODShiLtJ_T0093275.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106231781 106233093 - Zbtb38 protein_coding processed_transcript MGP_NODShiLtJ_T0093276.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106231878 106232992 - Zbtb38 protein_coding retained_intron MGP_NODShiLtJ_T0093277.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106249081 106254528 - Zbtb38 protein_coding retained_intron MGP_NODShiLtJ_T0093278.1 MGP_NODShiLtJ_G0034947.1 mouse_genomes_project 9 106249279 106254494 - Zbtb38 protein_coding processed_transcript MGP_NODShiLtJ_T0002426.1 MGP_NODShiLtJ_G0002335.1 mouse_genomes_project 9 132034010 132034644 + TEC TEC MGP_NODShiLtJ_T0091861.1 MGP_NODShiLtJ_G0034589.1 mouse_genomes_project 9 54457593 54462016 + Fdxacb1 protein_coding retained_intron MGP_NODShiLtJ_T0091862.1 MGP_NODShiLtJ_G0034589.1 mouse_genomes_project 9 54457606 54460938 + MGP_NODShiLtJ_P0091862 Fdxacb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091863.1 MGP_NODShiLtJ_G0034589.1 mouse_genomes_project 9 54457607 54461954 + MGP_NODShiLtJ_P0091863 Fdxacb1 protein_coding protein_coding MGP_NODShiLtJ_T0091865.1 MGP_NODShiLtJ_G0034589.1 mouse_genomes_project 9 54459413 54460884 + MGP_NODShiLtJ_P0091865 Fdxacb1 protein_coding protein_coding MGP_NODShiLtJ_T0090689.1 MGP_NODShiLtJ_G0034127.1 mouse_genomes_project 9 5445525 5467468 + MGP_NODShiLtJ_P0090689 protein_coding protein_coding MGP_NODShiLtJ_T0090690.1 MGP_NODShiLtJ_G0034127.1 mouse_genomes_project 9 5445592 5467938 + MGP_NODShiLtJ_P0090690 protein_coding protein_coding MGP_NODShiLtJ_T0016011.1 MGP_NODShiLtJ_G0014119.1 mouse_genomes_project 9 105037555 105038144 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090769.1 MGP_NODShiLtJ_G0034152.1 mouse_genomes_project 9 13430625 13440586 + MGP_NODShiLtJ_P0090769 Cwc15 protein_coding protein_coding MGP_NODShiLtJ_T0091696.1 MGP_NODShiLtJ_G0034539.1 mouse_genomes_project 9 49082523 49147982 - MGP_NODShiLtJ_P0091696 Cep164 protein_coding protein_coding MGP_NODShiLtJ_T0091697.1 MGP_NODShiLtJ_G0034539.1 mouse_genomes_project 9 49082525 49147905 - MGP_NODShiLtJ_P0091697 Cep164 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091698.1 MGP_NODShiLtJ_G0034539.1 mouse_genomes_project 9 49086323 49088107 - Cep164 protein_coding retained_intron MGP_NODShiLtJ_T0091699.1 MGP_NODShiLtJ_G0034539.1 mouse_genomes_project 9 49094807 49120202 - MGP_NODShiLtJ_P0091699 Cep164 protein_coding protein_coding MGP_NODShiLtJ_T0100927.1 MGP_NODShiLtJ_G0039321.1 mouse_genomes_project 9 124950428 124950545 - Gm25059 snoRNA snoRNA MGP_NODShiLtJ_T0093842.1 MGP_NODShiLtJ_G0035062.1 mouse_genomes_project 9 118041762 118048262 + MGP_NODShiLtJ_P0093842 Ifrd2 protein_coding protein_coding MGP_NODShiLtJ_T0093843.1 MGP_NODShiLtJ_G0035062.1 mouse_genomes_project 9 118041846 118048262 + Ifrd2 protein_coding retained_intron MGP_NODShiLtJ_T0093844.1 MGP_NODShiLtJ_G0035062.1 mouse_genomes_project 9 118041877 118045814 + MGP_NODShiLtJ_P0093844 Ifrd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093845.1 MGP_NODShiLtJ_G0035062.1 mouse_genomes_project 9 118044555 118045427 + Ifrd2 protein_coding retained_intron MGP_NODShiLtJ_T0093846.1 MGP_NODShiLtJ_G0035062.1 mouse_genomes_project 9 118045226 118047932 + MGP_NODShiLtJ_P0093846 Ifrd2 protein_coding protein_coding MGP_NODShiLtJ_T0093847.1 MGP_NODShiLtJ_G0035062.1 mouse_genomes_project 9 118047308 118047978 + MGP_NODShiLtJ_P0093847 Ifrd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093848.1 MGP_NODShiLtJ_G0035062.1 mouse_genomes_project 9 118047850 118048613 + Ifrd2 protein_coding processed_transcript MGP_NODShiLtJ_T0094291.1 MGP_NODShiLtJ_G0035122.1 mouse_genomes_project 9 119608221 119610023 - MGP_NODShiLtJ_P0094291 Trex1 protein_coding protein_coding MGP_NODShiLtJ_T0094293.1 MGP_NODShiLtJ_G0035122.1 mouse_genomes_project 9 119608226 119609540 - MGP_NODShiLtJ_P0094293 Trex1 protein_coding protein_coding MGP_NODShiLtJ_T0002419.1 MGP_NODShiLtJ_G0002328.1 mouse_genomes_project 9 121184360 121186947 - TEC TEC MGP_NODShiLtJ_T0091454.1 MGP_NODShiLtJ_G0034452.1 mouse_genomes_project 9 42707200 42708133 - MGP_NODShiLtJ_P0091454 Olfr975 protein_coding protein_coding MGP_NODShiLtJ_T0093052.1 MGP_NODShiLtJ_G0034895.1 mouse_genomes_project 9 94547502 94682601 - MGP_NODShiLtJ_P0093052 Me1 protein_coding protein_coding MGP_NODShiLtJ_T0093053.1 MGP_NODShiLtJ_G0034895.1 mouse_genomes_project 9 94547537 94672925 - MGP_NODShiLtJ_P0093053 Me1 protein_coding protein_coding MGP_NODShiLtJ_T0093054.1 MGP_NODShiLtJ_G0034895.1 mouse_genomes_project 9 94548604 94682398 - MGP_NODShiLtJ_P0093054 Me1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093055.1 MGP_NODShiLtJ_G0034895.1 mouse_genomes_project 9 94550215 94594010 - Me1 protein_coding processed_transcript MGP_NODShiLtJ_T0093056.1 MGP_NODShiLtJ_G0034895.1 mouse_genomes_project 9 94588826 94594043 - Me1 protein_coding processed_transcript MGP_NODShiLtJ_T0090857.1 MGP_NODShiLtJ_G0034185.1 mouse_genomes_project 9 18391898 18392846 + MGP_NODShiLtJ_P0090857 Olfr830 protein_coding protein_coding MGP_NODShiLtJ_T0094615.1 MGP_NODShiLtJ_G0035183.1 mouse_genomes_project 9 125705236 125744092 - MGP_NODShiLtJ_P0094615 Crtap protein_coding protein_coding MGP_NODShiLtJ_T0094616.1 MGP_NODShiLtJ_G0035183.1 mouse_genomes_project 9 125705252 125729155 - Crtap protein_coding retained_intron MGP_NODShiLtJ_T0091977.1 MGP_NODShiLtJ_G0034628.1 mouse_genomes_project 9 58786298 58794666 + MGP_NODShiLtJ_P0091977 Crabp1 protein_coding protein_coding MGP_NODShiLtJ_T0015932.1 MGP_NODShiLtJ_G0014040.1 mouse_genomes_project 9 63635635 63636170 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016046.1 MGP_NODShiLtJ_G0014154.1 mouse_genomes_project 9 122001481 122001834 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009154.1 MGP_NODShiLtJ_G0007350.1 mouse_genomes_project 9 47316509 47327748 - Gm10687 lincRNA lincRNA MGP_NODShiLtJ_T0093006.1 MGP_NODShiLtJ_G0034887.1 mouse_genomes_project 9 91466147 91684988 + MGP_NODShiLtJ_P0093006 Bckdhb protein_coding protein_coding MGP_NODShiLtJ_T0093007.1 MGP_NODShiLtJ_G0034887.1 mouse_genomes_project 9 91466172 91610578 + MGP_NODShiLtJ_P0093007 Bckdhb protein_coding protein_coding MGP_NODShiLtJ_T0093008.1 MGP_NODShiLtJ_G0034887.1 mouse_genomes_project 9 91485999 91684989 + MGP_NODShiLtJ_P0093008 Bckdhb protein_coding protein_coding MGP_NODShiLtJ_T0093009.1 MGP_NODShiLtJ_G0034887.1 mouse_genomes_project 9 91574268 91684947 + Bckdhb protein_coding processed_transcript MGP_NODShiLtJ_T0093010.1 MGP_NODShiLtJ_G0034887.1 mouse_genomes_project 9 91585264 91684988 + Bckdhb protein_coding processed_transcript MGP_NODShiLtJ_T0093011.1 MGP_NODShiLtJ_G0034887.1 mouse_genomes_project 9 91663600 91684989 + Bckdhb protein_coding processed_transcript MGP_NODShiLtJ_T0100923.1 MGP_NODShiLtJ_G0039317.1 mouse_genomes_project 9 119384391 119384538 - Gm23034 snoRNA snoRNA MGP_NODShiLtJ_T0092104.1 MGP_NODShiLtJ_G0034669.1 mouse_genomes_project 9 61927202 61933846 + MGP_NODShiLtJ_P0092104 Ulk3 protein_coding protein_coding MGP_NODShiLtJ_T0092917.1 MGP_NODShiLtJ_G0034873.1 mouse_genomes_project 9 86670575 86699013 - MGP_NODShiLtJ_P0092917 Tmem30a protein_coding protein_coding MGP_NODShiLtJ_T0092918.1 MGP_NODShiLtJ_G0034873.1 mouse_genomes_project 9 86670575 86699090 - MGP_NODShiLtJ_P0092918 Tmem30a protein_coding protein_coding MGP_NODShiLtJ_T0092919.1 MGP_NODShiLtJ_G0034873.1 mouse_genomes_project 9 86674163 86699013 - Tmem30a protein_coding retained_intron MGP_NODShiLtJ_T0092920.1 MGP_NODShiLtJ_G0034873.1 mouse_genomes_project 9 86679864 86699013 - Tmem30a protein_coding retained_intron MGP_NODShiLtJ_T0091811.1 MGP_NODShiLtJ_G0034575.1 mouse_genomes_project 9 54170907 54181644 + MGP_NODShiLtJ_P0091811 Plet1 protein_coding protein_coding MGP_NODShiLtJ_T0091812.1 MGP_NODShiLtJ_G0034575.1 mouse_genomes_project 9 54170909 54178159 + MGP_NODShiLtJ_P0091812 Plet1 protein_coding protein_coding MGP_NODShiLtJ_T0092744.1 MGP_NODShiLtJ_G0034822.1 mouse_genomes_project 9 78872947 78935036 + MGP_NODShiLtJ_P0092744 Rab27a protein_coding protein_coding MGP_NODShiLtJ_T0092745.1 MGP_NODShiLtJ_G0034822.1 mouse_genomes_project 9 78872950 78935000 + MGP_NODShiLtJ_P0092745 Rab27a protein_coding protein_coding MGP_NODShiLtJ_T0092746.1 MGP_NODShiLtJ_G0034822.1 mouse_genomes_project 9 78873077 78922753 + Rab27a protein_coding retained_intron MGP_NODShiLtJ_T0092747.1 MGP_NODShiLtJ_G0034822.1 mouse_genomes_project 9 78932249 78933830 + Rab27a protein_coding retained_intron MGP_NODShiLtJ_T0016049.1 MGP_NODShiLtJ_G0014157.1 mouse_genomes_project 9 129041322 129042686 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002390.1 MGP_NODShiLtJ_G0002299.1 mouse_genomes_project 9 112074462 112078728 - TEC TEC MGP_NODShiLtJ_T0009158.1 MGP_NODShiLtJ_G0007353.1 mouse_genomes_project 9 49676497 49680592 - 4930448E22Rik lincRNA lincRNA MGP_NODShiLtJ_T0005480.1 MGP_NODShiLtJ_G0004618.1 mouse_genomes_project 9 118228123 118228899 + Gm37850 antisense antisense MGP_NODShiLtJ_T0092684.1 MGP_NODShiLtJ_G0034811.1 mouse_genomes_project 9 78174658 78185342 + MGP_NODShiLtJ_P0092684 Mns1 protein_coding protein_coding MGP_NODShiLtJ_T0092685.1 MGP_NODShiLtJ_G0034811.1 mouse_genomes_project 9 78175169 78190063 + MGP_NODShiLtJ_P0092685 Mns1 protein_coding protein_coding MGP_NODShiLtJ_T0092686.1 MGP_NODShiLtJ_G0034811.1 mouse_genomes_project 9 78175178 78199348 + MGP_NODShiLtJ_P0092686 Mns1 protein_coding protein_coding MGP_NODShiLtJ_T0092897.1 MGP_NODShiLtJ_G0034867.1 mouse_genomes_project 9 85133308 85134230 - MGP_NODShiLtJ_P0092897 Gm17324 protein_coding protein_coding MGP_NODShiLtJ_T0092764.1 MGP_NODShiLtJ_G0034828.1 mouse_genomes_project 9 80889023 80919299 + MGP_NODShiLtJ_P0092764 Onecut1 protein_coding protein_coding MGP_NODShiLtJ_T0092765.1 MGP_NODShiLtJ_G0034828.1 mouse_genomes_project 9 80893615 80917878 + Onecut1 protein_coding processed_transcript MGP_NODShiLtJ_T0093113.1 MGP_NODShiLtJ_G0034912.1 mouse_genomes_project 9 97456355 97472989 + MGP_NODShiLtJ_P0093113 Bcl2a1b protein_coding protein_coding MGP_NODShiLtJ_T0009262.1 MGP_NODShiLtJ_G0007434.1 mouse_genomes_project 9 123236692 123237356 + 2310075C17Rik lincRNA lincRNA MGP_NODShiLtJ_T0005456.1 MGP_NODShiLtJ_G0004601.1 mouse_genomes_project 9 109458826 109505886 + Gm16004 antisense antisense MGP_NODShiLtJ_T0093944.1 MGP_NODShiLtJ_G0035070.1 mouse_genomes_project 9 118365381 118380369 + MGP_NODShiLtJ_P0093944 Mon1a protein_coding protein_coding MGP_NODShiLtJ_T0093945.1 MGP_NODShiLtJ_G0035070.1 mouse_genomes_project 9 118365412 118380374 + MGP_NODShiLtJ_P0093945 Mon1a protein_coding protein_coding MGP_NODShiLtJ_T0091950.1 MGP_NODShiLtJ_G0034619.1 mouse_genomes_project 9 58149792 58178348 - MGP_NODShiLtJ_P0091950 Cyp19a1 protein_coding protein_coding MGP_NODShiLtJ_T0094850.1 MGP_NODShiLtJ_G0035260.1 mouse_genomes_project 9 134792416 134847764 + MGP_NODShiLtJ_P0094850 Topaz1 protein_coding protein_coding MGP_NODShiLtJ_T0099624.1 MGP_NODShiLtJ_G0038018.1 mouse_genomes_project 9 89798714 89798775 - Gm22836 snRNA snRNA MGP_NODShiLtJ_T0002395.1 MGP_NODShiLtJ_G0002304.1 mouse_genomes_project 9 113530358 113532566 + TEC TEC MGP_NODShiLtJ_T0009270.1 MGP_NODShiLtJ_G0007439.1 mouse_genomes_project 9 130667802 130668702 + Gm16295 lincRNA lincRNA MGP_NODShiLtJ_T0092097.1 MGP_NODShiLtJ_G0034666.1 mouse_genomes_project 9 61871021 61874220 + MGP_NODShiLtJ_P0092097 Fam219b protein_coding protein_coding MGP_NODShiLtJ_T0005402.1 MGP_NODShiLtJ_G0004566.1 mouse_genomes_project 9 71640207 71645707 - Gm28379 antisense antisense MGP_NODShiLtJ_T0005403.1 MGP_NODShiLtJ_G0004566.1 mouse_genomes_project 9 71640764 71688178 - Gm28379 antisense antisense MGP_NODShiLtJ_T0094829.1 MGP_NODShiLtJ_G0035251.1 mouse_genomes_project 9 133856683 133866124 - MGP_NODShiLtJ_P0094829 Higd1a protein_coding protein_coding MGP_NODShiLtJ_T0093715.1 MGP_NODShiLtJ_G0035038.1 mouse_genomes_project 9 116888224 116891723 - MGP_NODShiLtJ_P0093715 Iqcf4 protein_coding protein_coding MGP_NODShiLtJ_T0100867.1 MGP_NODShiLtJ_G0039261.1 mouse_genomes_project 9 14309751 14309827 - Gm24339 snoRNA snoRNA MGP_NODShiLtJ_T0092574.1 MGP_NODShiLtJ_G0034791.1 mouse_genomes_project 9 75493393 75512803 + MGP_NODShiLtJ_P0092574 Bnip2 protein_coding protein_coding MGP_NODShiLtJ_T0092575.1 MGP_NODShiLtJ_G0034791.1 mouse_genomes_project 9 75493431 75512741 + MGP_NODShiLtJ_P0092575 Bnip2 protein_coding protein_coding MGP_NODShiLtJ_T0092576.1 MGP_NODShiLtJ_G0034791.1 mouse_genomes_project 9 75493442 75508495 + MGP_NODShiLtJ_P0092576 Bnip2 protein_coding protein_coding MGP_NODShiLtJ_T0092577.1 MGP_NODShiLtJ_G0034791.1 mouse_genomes_project 9 75493444 75503646 + MGP_NODShiLtJ_P0092577 Bnip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092578.1 MGP_NODShiLtJ_G0034791.1 mouse_genomes_project 9 75499406 75511601 + MGP_NODShiLtJ_P0092578 Bnip2 protein_coding protein_coding MGP_NODShiLtJ_T0092579.1 MGP_NODShiLtJ_G0034791.1 mouse_genomes_project 9 75501663 75506726 + Bnip2 protein_coding retained_intron MGP_NODShiLtJ_T0092580.1 MGP_NODShiLtJ_G0034791.1 mouse_genomes_project 9 75502719 75508125 + Bnip2 protein_coding processed_transcript MGP_NODShiLtJ_T0092581.1 MGP_NODShiLtJ_G0034791.1 mouse_genomes_project 9 75507866 75509251 + MGP_NODShiLtJ_P0092581 Bnip2 protein_coding protein_coding MGP_NODShiLtJ_T0091914.1 MGP_NODShiLtJ_G0034603.1 mouse_genomes_project 9 55914285 55981230 - MGP_NODShiLtJ_P0091914 Zc3h12c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091915.1 MGP_NODShiLtJ_G0034603.1 mouse_genomes_project 9 55916354 55980816 - MGP_NODShiLtJ_P0091915 Zc3h12c protein_coding protein_coding MGP_NODShiLtJ_T0098467.1 MGP_NODShiLtJ_G0036866.1 mouse_genomes_project 9 96574451 96576604 - Gm28229 sense_intronic sense_intronic MGP_NODShiLtJ_T0005382.1 MGP_NODShiLtJ_G0004555.1 mouse_genomes_project 9 55004125 55011346 + 2010007H06Rik antisense antisense MGP_NODShiLtJ_T0005383.1 MGP_NODShiLtJ_G0004555.1 mouse_genomes_project 9 55005907 55006533 + 2010007H06Rik antisense antisense MGP_NODShiLtJ_T0093418.1 MGP_NODShiLtJ_G0034983.1 mouse_genomes_project 9 111066593 111175738 - MGP_NODShiLtJ_P0093418 Ppp2r3a protein_coding protein_coding MGP_NODShiLtJ_T0093419.1 MGP_NODShiLtJ_G0034983.1 mouse_genomes_project 9 111066795 111159664 - MGP_NODShiLtJ_P0093419 Ppp2r3a protein_coding protein_coding MGP_NODShiLtJ_T0093420.1 MGP_NODShiLtJ_G0034983.1 mouse_genomes_project 9 111069424 111088120 - Ppp2r3a protein_coding processed_transcript MGP_NODShiLtJ_T0093421.1 MGP_NODShiLtJ_G0034983.1 mouse_genomes_project 9 111087239 111159442 - Ppp2r3a protein_coding retained_intron MGP_NODShiLtJ_T0093422.1 MGP_NODShiLtJ_G0034983.1 mouse_genomes_project 9 111152551 111159596 - Ppp2r3a protein_coding retained_intron MGP_NODShiLtJ_T0093423.1 MGP_NODShiLtJ_G0034983.1 mouse_genomes_project 9 111158056 111161268 - Ppp2r3a protein_coding retained_intron MGP_NODShiLtJ_T0093424.1 MGP_NODShiLtJ_G0034983.1 mouse_genomes_project 9 111166901 111174022 - Ppp2r3a protein_coding processed_transcript MGP_NODShiLtJ_T0092317.1 MGP_NODShiLtJ_G0034723.1 mouse_genomes_project 9 67703492 67717757 + MGP_NODShiLtJ_P0092317 Calml4 protein_coding protein_coding MGP_NODShiLtJ_T0092318.1 MGP_NODShiLtJ_G0034723.1 mouse_genomes_project 9 67703492 67717757 + MGP_NODShiLtJ_P0092318 Calml4 protein_coding protein_coding MGP_NODShiLtJ_T0091130.1 MGP_NODShiLtJ_G0034304.1 mouse_genomes_project 9 27973973 28000888 - MGP_NODShiLtJ_P0091130 Vps26b protein_coding protein_coding MGP_NODShiLtJ_T0091464.1 MGP_NODShiLtJ_G0034462.1 mouse_genomes_project 9 43025394 43026410 + MGP_NODShiLtJ_P0091464 Olfr986 protein_coding protein_coding MGP_NODShiLtJ_T0009251.1 MGP_NODShiLtJ_G0007427.1 mouse_genomes_project 9 118049667 118050134 + Gm38150 lincRNA lincRNA MGP_NODShiLtJ_T0091010.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21851262 21899353 + Carm1 protein_coding retained_intron MGP_NODShiLtJ_T0091011.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21851262 21899353 + MGP_NODShiLtJ_P0091011 Carm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091012.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21851262 21899353 + MGP_NODShiLtJ_P0091012 Carm1 protein_coding protein_coding MGP_NODShiLtJ_T0091013.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21851262 21899353 + MGP_NODShiLtJ_P0091013 Carm1 protein_coding protein_coding MGP_NODShiLtJ_T0091014.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21851262 21899373 + MGP_NODShiLtJ_P0091014 Carm1 protein_coding protein_coding MGP_NODShiLtJ_T0091015.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21851389 21887675 + Carm1 protein_coding processed_transcript MGP_NODShiLtJ_T0091016.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21883305 21888547 + Carm1 protein_coding processed_transcript MGP_NODShiLtJ_T0091017.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21897103 21898086 + Carm1 protein_coding processed_transcript MGP_NODShiLtJ_T0091018.1 MGP_NODShiLtJ_G0034255.1 mouse_genomes_project 9 21897288 21898015 + Carm1 protein_coding processed_transcript MGP_NODShiLtJ_T0009168.1 MGP_NODShiLtJ_G0007361.1 mouse_genomes_project 9 62387982 62400166 + Gm17322 lincRNA lincRNA MGP_NODShiLtJ_T0099630.1 MGP_NODShiLtJ_G0038024.1 mouse_genomes_project 9 98664559 98664730 + Gm22717 snRNA snRNA MGP_NODShiLtJ_T0091918.1 MGP_NODShiLtJ_G0034606.1 mouse_genomes_project 9 57197538 57281773 + MGP_NODShiLtJ_P0091918 Exph5 protein_coding protein_coding MGP_NODShiLtJ_T0091919.1 MGP_NODShiLtJ_G0034606.1 mouse_genomes_project 9 57242142 57273214 + Exph5 protein_coding retained_intron MGP_NODShiLtJ_T0091920.1 MGP_NODShiLtJ_G0034606.1 mouse_genomes_project 9 57242247 57256688 + Exph5 protein_coding retained_intron MGP_NODShiLtJ_T0091099.1 MGP_NODShiLtJ_G0034292.1 mouse_genomes_project 9 25285050 25285689 + MGP_NODShiLtJ_P0091099 Cypt4 protein_coding protein_coding MGP_NODShiLtJ_T0092720.1 MGP_NODShiLtJ_G0034817.1 mouse_genomes_project 9 78783300 78798157 + MGP_NODShiLtJ_P0092720 Dyx1c1 protein_coding protein_coding MGP_NODShiLtJ_T0092721.1 MGP_NODShiLtJ_G0034817.1 mouse_genomes_project 9 78783300 78798160 + MGP_NODShiLtJ_P0092721 Dyx1c1 protein_coding protein_coding MGP_NODShiLtJ_T0002345.1 MGP_NODShiLtJ_G0002255.1 mouse_genomes_project 9 90547876 90550681 + TEC TEC MGP_NODShiLtJ_T0094657.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129718711 129746418 + MGP_NODShiLtJ_P0094657 Azi2 protein_coding protein_coding MGP_NODShiLtJ_T0094658.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129718769 129743327 + MGP_NODShiLtJ_P0094658 Azi2 protein_coding protein_coding MGP_NODShiLtJ_T0094659.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129718791 129741072 + MGP_NODShiLtJ_P0094659 Azi2 protein_coding protein_coding MGP_NODShiLtJ_T0094660.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129718828 129752373 + MGP_NODShiLtJ_P0094660 Azi2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094661.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129718899 129730184 + Azi2 protein_coding retained_intron MGP_NODShiLtJ_T0094662.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129729278 129743077 + MGP_NODShiLtJ_P0094662 Azi2 protein_coding protein_coding MGP_NODShiLtJ_T0094663.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129729339 129731308 + Azi2 protein_coding retained_intron MGP_NODShiLtJ_T0094664.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129730535 129742472 + MGP_NODShiLtJ_P0094664 Azi2 protein_coding protein_coding MGP_NODShiLtJ_T0094665.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129735185 129742374 + Azi2 protein_coding retained_intron MGP_NODShiLtJ_T0094666.1 MGP_NODShiLtJ_G0035201.1 mouse_genomes_project 9 129738509 129742848 + MGP_NODShiLtJ_P0094666 Azi2 protein_coding protein_coding MGP_NODShiLtJ_T0015943.1 MGP_NODShiLtJ_G0014051.1 mouse_genomes_project 9 77800809 77801614 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091102.1 MGP_NODShiLtJ_G0034294.1 mouse_genomes_project 9 25866498 25917429 - MGP_NODShiLtJ_P0091102 Herpud2 protein_coding protein_coding MGP_NODShiLtJ_T0010966.1 MGP_NODShiLtJ_G0009099.1 mouse_genomes_project 9 69729871 69729978 - miRNA miRNA MGP_NODShiLtJ_T0094499.1 MGP_NODShiLtJ_G0035162.1 mouse_genomes_project 9 121848996 121858141 - MGP_NODShiLtJ_P0094499 Tdgf1 protein_coding protein_coding MGP_NODShiLtJ_T0094500.1 MGP_NODShiLtJ_G0035162.1 mouse_genomes_project 9 121849651 121858077 - MGP_NODShiLtJ_P0094500 Tdgf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094501.1 MGP_NODShiLtJ_G0035162.1 mouse_genomes_project 9 121853258 121858058 - MGP_NODShiLtJ_P0094501 Tdgf1 protein_coding protein_coding MGP_NODShiLtJ_T0094502.1 MGP_NODShiLtJ_G0035162.1 mouse_genomes_project 9 121853543 121856856 - MGP_NODShiLtJ_P0094502 Tdgf1 protein_coding protein_coding MGP_NODShiLtJ_T0091267.1 MGP_NODShiLtJ_G0034341.1 mouse_genomes_project 9 37360175 37362468 - MGP_NODShiLtJ_P0091267 Pate1 protein_coding protein_coding MGP_NODShiLtJ_T0091268.1 MGP_NODShiLtJ_G0034341.1 mouse_genomes_project 9 37360522 37362487 - Pate1 protein_coding retained_intron MGP_NODShiLtJ_T0090886.1 MGP_NODShiLtJ_G0034214.1 mouse_genomes_project 9 20499404 20500466 + MGP_NODShiLtJ_P0090886 Olfr873 protein_coding protein_coding MGP_NODShiLtJ_T0093629.1 MGP_NODShiLtJ_G0035022.1 mouse_genomes_project 9 116495514 116502604 - MGP_NODShiLtJ_P0093629 Ppm1m protein_coding protein_coding MGP_NODShiLtJ_T0093630.1 MGP_NODShiLtJ_G0035022.1 mouse_genomes_project 9 116495514 116500314 - MGP_NODShiLtJ_P0093630 Ppm1m protein_coding protein_coding MGP_NODShiLtJ_T0093631.1 MGP_NODShiLtJ_G0035022.1 mouse_genomes_project 9 116496289 116498240 - MGP_NODShiLtJ_P0093631 Ppm1m protein_coding protein_coding MGP_NODShiLtJ_T0093632.1 MGP_NODShiLtJ_G0035022.1 mouse_genomes_project 9 116498886 116499710 - Ppm1m protein_coding retained_intron MGP_NODShiLtJ_T0093633.1 MGP_NODShiLtJ_G0035022.1 mouse_genomes_project 9 116499296 116503071 - Ppm1m protein_coding processed_transcript MGP_NODShiLtJ_T0015946.1 MGP_NODShiLtJ_G0014054.1 mouse_genomes_project 9 77997879 77998324 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092334.1 MGP_NODShiLtJ_G0034729.1 mouse_genomes_project 9 68501543 68541787 + MGP_NODShiLtJ_P0092334 Aagab protein_coding protein_coding MGP_NODShiLtJ_T0090700.1 MGP_NODShiLtJ_G0034132.1 mouse_genomes_project 9 5753519 5778330 - MGP_NODShiLtJ_P0090700 Birc3 protein_coding protein_coding MGP_NODShiLtJ_T0090701.1 MGP_NODShiLtJ_G0034132.1 mouse_genomes_project 9 5754514 5765380 - MGP_NODShiLtJ_P0090701 Birc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090702.1 MGP_NODShiLtJ_G0034132.1 mouse_genomes_project 9 5761181 5778289 - MGP_NODShiLtJ_P0090702 Birc3 protein_coding protein_coding MGP_NODShiLtJ_T0090703.1 MGP_NODShiLtJ_G0034132.1 mouse_genomes_project 9 5765844 5778476 - MGP_NODShiLtJ_P0090703 Birc3 protein_coding protein_coding MGP_NODShiLtJ_T0090704.1 MGP_NODShiLtJ_G0034132.1 mouse_genomes_project 9 5765863 5778492 - MGP_NODShiLtJ_P0090704 Birc3 protein_coding protein_coding MGP_NODShiLtJ_T0090705.1 MGP_NODShiLtJ_G0034132.1 mouse_genomes_project 9 5771246 5778163 - Birc3 protein_coding processed_transcript MGP_NODShiLtJ_T0090706.1 MGP_NODShiLtJ_G0034132.1 mouse_genomes_project 9 5773701 5778203 - Birc3 protein_coding processed_transcript MGP_NODShiLtJ_T0009196.1 MGP_NODShiLtJ_G0007383.1 mouse_genomes_project 9 83857719 83891037 - 5730403I07Rik lincRNA lincRNA MGP_NODShiLtJ_T0009263.1 MGP_NODShiLtJ_G0007435.1 mouse_genomes_project 9 123243385 123245129 + 2900079G21Rik lincRNA lincRNA MGP_NODShiLtJ_T0009264.1 MGP_NODShiLtJ_G0007435.1 mouse_genomes_project 9 123243402 123300908 + 2900079G21Rik lincRNA lincRNA MGP_NODShiLtJ_T0009265.1 MGP_NODShiLtJ_G0007435.1 mouse_genomes_project 9 123243489 123245127 + 2900079G21Rik lincRNA lincRNA MGP_NODShiLtJ_T0009266.1 MGP_NODShiLtJ_G0007435.1 mouse_genomes_project 9 123269985 123371748 + 2900079G21Rik lincRNA lincRNA MGP_NODShiLtJ_T0092064.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378860 61390440 + MGP_NODShiLtJ_P0092064 Man2c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092065.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378860 61399014 + MGP_NODShiLtJ_P0092065 Man2c1 protein_coding protein_coding MGP_NODShiLtJ_T0092066.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378938 61397002 + MGP_NODShiLtJ_P0092066 Man2c1 protein_coding protein_coding MGP_NODShiLtJ_T0092067.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378938 61393080 + MGP_NODShiLtJ_P0092067 Man2c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092068.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378940 61391415 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092069.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378940 61398495 + MGP_NODShiLtJ_P0092069 Man2c1 protein_coding protein_coding MGP_NODShiLtJ_T0092070.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378947 61379424 + Man2c1 protein_coding processed_transcript MGP_NODShiLtJ_T0092071.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378956 61394094 + MGP_NODShiLtJ_P0092071 Man2c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092072.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378956 61398496 + MGP_NODShiLtJ_P0092072 Man2c1 protein_coding protein_coding MGP_NODShiLtJ_T0092073.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61378956 61395689 + MGP_NODShiLtJ_P0092073 Man2c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092074.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61379544 61391389 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092075.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61391227 61393814 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092076.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61391875 61393287 + MGP_NODShiLtJ_P0092076 Man2c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092077.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61393028 61394128 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092078.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61394333 61397020 + MGP_NODShiLtJ_P0092078 Man2c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092079.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61394716 61396703 + MGP_NODShiLtJ_P0092079 Man2c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092080.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61395158 61396285 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092081.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61395790 61398505 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092082.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61395790 61397004 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092083.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61396168 61397471 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092084.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61396569 61398499 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092085.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61396974 61398505 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092086.1 MGP_NODShiLtJ_G0034657.1 mouse_genomes_project 9 61397669 61398499 + Man2c1 protein_coding retained_intron MGP_NODShiLtJ_T0092898.1 MGP_NODShiLtJ_G0034868.1 mouse_genomes_project 9 85133651 85167172 + MGP_NODShiLtJ_P0092898 Mto1 protein_coding protein_coding MGP_NODShiLtJ_T0092899.1 MGP_NODShiLtJ_G0034868.1 mouse_genomes_project 9 85133651 85167172 + MGP_NODShiLtJ_P0092899 Mto1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092900.1 MGP_NODShiLtJ_G0034868.1 mouse_genomes_project 9 85133656 85137943 + Mto1 protein_coding retained_intron MGP_NODShiLtJ_T0092901.1 MGP_NODShiLtJ_G0034868.1 mouse_genomes_project 9 85153906 85163448 + Mto1 protein_coding retained_intron MGP_NODShiLtJ_T0092902.1 MGP_NODShiLtJ_G0034868.1 mouse_genomes_project 9 85154199 85168368 + MGP_NODShiLtJ_P0092902 Mto1 protein_coding protein_coding MGP_NODShiLtJ_T0092903.1 MGP_NODShiLtJ_G0034868.1 mouse_genomes_project 9 85163099 85166853 + Mto1 protein_coding retained_intron MGP_NODShiLtJ_T0090664.1 MGP_NODShiLtJ_G0034116.1 mouse_genomes_project 9 3825739 4066306 + MGP_NODShiLtJ_P0090664 Pdgfd protein_coding protein_coding MGP_NODShiLtJ_T0090665.1 MGP_NODShiLtJ_G0034116.1 mouse_genomes_project 9 3825788 4067625 + MGP_NODShiLtJ_P0090665 Pdgfd protein_coding protein_coding MGP_NODShiLtJ_T0092516.1 MGP_NODShiLtJ_G0034780.1 mouse_genomes_project 9 72225635 72231454 + MGP_NODShiLtJ_P0092516 Rps27l protein_coding protein_coding MGP_NODShiLtJ_T0092517.1 MGP_NODShiLtJ_G0034780.1 mouse_genomes_project 9 72225640 72231456 + MGP_NODShiLtJ_P0092517 Rps27l protein_coding protein_coding MGP_NODShiLtJ_T0092518.1 MGP_NODShiLtJ_G0034780.1 mouse_genomes_project 9 72225715 72231410 + MGP_NODShiLtJ_P0092518 Rps27l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092519.1 MGP_NODShiLtJ_G0034780.1 mouse_genomes_project 9 72225904 72231458 + Rps27l protein_coding processed_transcript MGP_NODShiLtJ_T0092520.1 MGP_NODShiLtJ_G0034780.1 mouse_genomes_project 9 72227191 72231410 + MGP_NODShiLtJ_P0092520 Rps27l protein_coding protein_coding MGP_NODShiLtJ_T0092521.1 MGP_NODShiLtJ_G0034780.1 mouse_genomes_project 9 72230474 72231453 + Rps27l protein_coding retained_intron MGP_NODShiLtJ_T0093504.1 MGP_NODShiLtJ_G0035001.1 mouse_genomes_project 9 113585335 113800980 - MGP_NODShiLtJ_P0093504 Tmem108 protein_coding protein_coding MGP_NODShiLtJ_T0093505.1 MGP_NODShiLtJ_G0035001.1 mouse_genomes_project 9 113586965 113873188 - MGP_NODShiLtJ_P0093505 Tmem108 protein_coding protein_coding MGP_NODShiLtJ_T0093506.1 MGP_NODShiLtJ_G0035001.1 mouse_genomes_project 9 113587623 113873145 - MGP_NODShiLtJ_P0093506 Tmem108 protein_coding protein_coding MGP_NODShiLtJ_T0093507.1 MGP_NODShiLtJ_G0035001.1 mouse_genomes_project 9 113587626 113596741 - Tmem108 protein_coding retained_intron MGP_NODShiLtJ_T0093508.1 MGP_NODShiLtJ_G0035001.1 mouse_genomes_project 9 113863562 113873141 - Tmem108 protein_coding retained_intron MGP_NODShiLtJ_T0005484.1 MGP_NODShiLtJ_G0004622.1 mouse_genomes_project 9 118490999 118497140 - Gm38134 antisense antisense MGP_NODShiLtJ_T0010991.1 MGP_NODShiLtJ_G0009124.1 mouse_genomes_project 9 119516298 119516380 + Mir711 miRNA miRNA MGP_NODShiLtJ_T0094421.1 MGP_NODShiLtJ_G0035145.1 mouse_genomes_project 9 121291376 121340983 - MGP_NODShiLtJ_P0094421 Klhl18 protein_coding protein_coding MGP_NODShiLtJ_T0094422.1 MGP_NODShiLtJ_G0035145.1 mouse_genomes_project 9 121291384 121340979 - MGP_NODShiLtJ_P0094422 Klhl18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094423.1 MGP_NODShiLtJ_G0035145.1 mouse_genomes_project 9 121291384 121341078 - MGP_NODShiLtJ_P0094423 Klhl18 protein_coding protein_coding MGP_NODShiLtJ_T0094424.1 MGP_NODShiLtJ_G0035145.1 mouse_genomes_project 9 121296179 121298042 - Klhl18 protein_coding retained_intron MGP_NODShiLtJ_T0094425.1 MGP_NODShiLtJ_G0035145.1 mouse_genomes_project 9 121301640 121320209 - MGP_NODShiLtJ_P0094425 Klhl18 protein_coding protein_coding MGP_NODShiLtJ_T0094426.1 MGP_NODShiLtJ_G0035145.1 mouse_genomes_project 9 121302859 121311616 - Klhl18 protein_coding retained_intron MGP_NODShiLtJ_T0092803.1 MGP_NODShiLtJ_G0034836.1 mouse_genomes_project 9 81511639 81512170 - MGP_NODShiLtJ_P0092803 A130057D12Rik protein_coding protein_coding MGP_NODShiLtJ_T0091027.1 MGP_NODShiLtJ_G0034259.1 mouse_genomes_project 9 22072377 22098539 + MGP_NODShiLtJ_P0091027 Ldlr protein_coding protein_coding MGP_NODShiLtJ_T0100860.1 MGP_NODShiLtJ_G0039254.1 mouse_genomes_project 9 14297857 14297928 + Gm24299 snoRNA snoRNA MGP_NODShiLtJ_T0091028.1 MGP_NODShiLtJ_G0034260.1 mouse_genomes_project 9 22105471 22110164 - MGP_NODShiLtJ_P0091028 Spc24 protein_coding protein_coding MGP_NODShiLtJ_T0016035.1 MGP_NODShiLtJ_G0014143.1 mouse_genomes_project 9 114307730 114308343 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016022.1 MGP_NODShiLtJ_G0014130.1 mouse_genomes_project 9 108936132 108936655 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093502.1 MGP_NODShiLtJ_G0035000.1 mouse_genomes_project 9 113524488 113582809 - MGP_NODShiLtJ_P0093502 Bfsp2 protein_coding protein_coding MGP_NODShiLtJ_T0093503.1 MGP_NODShiLtJ_G0035000.1 mouse_genomes_project 9 113524492 113549788 - Bfsp2 protein_coding processed_transcript MGP_NODShiLtJ_T0091441.1 MGP_NODShiLtJ_G0034439.1 mouse_genomes_project 9 42286011 42287156 + MGP_NODShiLtJ_P0091441 Olfr960 protein_coding protein_coding MGP_NODShiLtJ_T0094708.1 MGP_NODShiLtJ_G0035214.1 mouse_genomes_project 9 131007836 131096645 - MGP_NODShiLtJ_P0094708 Oxsr1 protein_coding protein_coding MGP_NODShiLtJ_T0094709.1 MGP_NODShiLtJ_G0035214.1 mouse_genomes_project 9 131010074 131096540 - MGP_NODShiLtJ_P0094709 Oxsr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094710.1 MGP_NODShiLtJ_G0035214.1 mouse_genomes_project 9 131010549 131012767 - Oxsr1 protein_coding retained_intron MGP_NODShiLtJ_T0094711.1 MGP_NODShiLtJ_G0035214.1 mouse_genomes_project 9 131012172 131034170 - MGP_NODShiLtJ_P0094711 Oxsr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002300.1 MGP_NODShiLtJ_G0002210.1 mouse_genomes_project 9 31230212 31298320 - TEC TEC MGP_NODShiLtJ_T0011002.1 MGP_NODShiLtJ_G0009135.1 mouse_genomes_project 9 134278237 134278376 - Mir8106 miRNA miRNA MGP_NODShiLtJ_T0099598.1 MGP_NODShiLtJ_G0037992.1 mouse_genomes_project 9 48946732 48946839 - Gm22069 snRNA snRNA MGP_NODShiLtJ_T0093368.1 MGP_NODShiLtJ_G0034973.1 mouse_genomes_project 9 109349082 109361241 + MGP_NODShiLtJ_P0093368 A4gnt protein_coding protein_coding MGP_NODShiLtJ_T0091412.1 MGP_NODShiLtJ_G0034416.1 mouse_genomes_project 9 41166179 41167311 + MGP_NODShiLtJ_P0091412 Olfr922 protein_coding protein_coding MGP_NODShiLtJ_T0009229.1 MGP_NODShiLtJ_G0007407.1 mouse_genomes_project 9 106009370 106016181 - lincRNA lincRNA MGP_NODShiLtJ_T0000342.1 MGP_NODShiLtJ_G0000280.1 mouse_genomes_project 9 135177308 135177377 + mt-Ta Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0094480.1 MGP_NODShiLtJ_G0035155.1 mouse_genomes_project 9 121726735 121731881 + MGP_NODShiLtJ_P0094480 Prss43 protein_coding protein_coding MGP_NODShiLtJ_T0092856.1 MGP_NODShiLtJ_G0034852.1 mouse_genomes_project 9 84473867 84549194 + MGP_NODShiLtJ_P0092856 Elovl5 protein_coding protein_coding MGP_NODShiLtJ_T0092857.1 MGP_NODShiLtJ_G0034852.1 mouse_genomes_project 9 84473937 84521743 + Elovl5 protein_coding retained_intron MGP_NODShiLtJ_T0092858.1 MGP_NODShiLtJ_G0034852.1 mouse_genomes_project 9 84480109 84544544 + MGP_NODShiLtJ_P0092858 Elovl5 protein_coding protein_coding MGP_NODShiLtJ_T0092859.1 MGP_NODShiLtJ_G0034852.1 mouse_genomes_project 9 84501550 84525047 + MGP_NODShiLtJ_P0092859 Elovl5 protein_coding protein_coding MGP_NODShiLtJ_T0094035.1 MGP_NODShiLtJ_G0035084.1 mouse_genomes_project 9 118574388 118578956 + MGP_NODShiLtJ_P0094035 Mst1 protein_coding protein_coding MGP_NODShiLtJ_T0094036.1 MGP_NODShiLtJ_G0035084.1 mouse_genomes_project 9 118574406 118578948 + MGP_NODShiLtJ_P0094036 Mst1 protein_coding protein_coding MGP_NODShiLtJ_T0094037.1 MGP_NODShiLtJ_G0035084.1 mouse_genomes_project 9 118574435 118576267 + MGP_NODShiLtJ_P0094037 Mst1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094038.1 MGP_NODShiLtJ_G0035084.1 mouse_genomes_project 9 118578257 118578951 + MGP_NODShiLtJ_P0094038 Mst1 protein_coding protein_coding MGP_NODShiLtJ_T0092404.1 MGP_NODShiLtJ_G0034747.1 mouse_genomes_project 9 70185842 70231681 + MGP_NODShiLtJ_P0092404 Igdcc3 protein_coding protein_coding MGP_NODShiLtJ_T0092405.1 MGP_NODShiLtJ_G0034747.1 mouse_genomes_project 9 70186103 70232857 + MGP_NODShiLtJ_P0092405 Igdcc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0005424.1 MGP_NODShiLtJ_G0004583.1 mouse_genomes_project 9 88752608 88765722 + D430036J16Rik antisense antisense MGP_NODShiLtJ_T0005425.1 MGP_NODShiLtJ_G0004583.1 mouse_genomes_project 9 88752987 88766249 + D430036J16Rik antisense antisense MGP_NODShiLtJ_T0005426.1 MGP_NODShiLtJ_G0004583.1 mouse_genomes_project 9 88753090 88765290 + D430036J16Rik antisense antisense MGP_NODShiLtJ_T0005427.1 MGP_NODShiLtJ_G0004583.1 mouse_genomes_project 9 88753415 88766178 + D430036J16Rik antisense antisense MGP_NODShiLtJ_T0005428.1 MGP_NODShiLtJ_G0004583.1 mouse_genomes_project 9 88753475 88765448 + D430036J16Rik antisense antisense MGP_NODShiLtJ_T0091996.1 MGP_NODShiLtJ_G0034636.1 mouse_genomes_project 9 59192522 59261538 + MGP_NODShiLtJ_P0091996 Ube2q2 protein_coding protein_coding MGP_NODShiLtJ_T0091997.1 MGP_NODShiLtJ_G0034636.1 mouse_genomes_project 9 59192762 59262673 + MGP_NODShiLtJ_P0091997 Ube2q2 protein_coding protein_coding MGP_NODShiLtJ_T0091998.1 MGP_NODShiLtJ_G0034636.1 mouse_genomes_project 9 59247196 59261349 + Ube2q2 protein_coding retained_intron MGP_NODShiLtJ_T0009132.1 MGP_NODShiLtJ_G0007331.1 mouse_genomes_project 9 25917803 25940771 + Gm29642 lincRNA lincRNA MGP_NODShiLtJ_T0100866.1 MGP_NODShiLtJ_G0039260.1 mouse_genomes_project 9 14309553 14309623 - Scarna9 snoRNA snoRNA MGP_NODShiLtJ_T0092237.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64571005 64589753 - Nr2e3 protein_coding retained_intron MGP_NODShiLtJ_T0092238.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64571005 64578269 - Nr2e3 protein_coding retained_intron MGP_NODShiLtJ_T0092239.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64571005 64578352 - MGP_NODShiLtJ_P0092239 Nr2e3 protein_coding protein_coding MGP_NODShiLtJ_T0092240.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64571221 64578345 - Nr2e3 protein_coding retained_intron MGP_NODShiLtJ_T0092241.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64571362 64578309 - Nr2e3 protein_coding retained_intron MGP_NODShiLtJ_T0092242.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64574984 64577026 - Nr2e3 protein_coding retained_intron MGP_NODShiLtJ_T0092243.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64575605 64577629 - Nr2e3 protein_coding processed_transcript MGP_NODShiLtJ_T0092244.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64576832 64589749 - Nr2e3 protein_coding processed_transcript MGP_NODShiLtJ_T0092245.1 MGP_NODShiLtJ_G0034706.1 mouse_genomes_project 9 64576952 64578309 - Nr2e3 protein_coding retained_intron MGP_NODShiLtJ_T0099602.1 MGP_NODShiLtJ_G0037996.1 mouse_genomes_project 9 53475191 53475298 - Gm25633 snRNA snRNA MGP_NODShiLtJ_T0015998.1 MGP_NODShiLtJ_G0014106.1 mouse_genomes_project 9 99194621 99194784 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092176.1 MGP_NODShiLtJ_G0034688.1 mouse_genomes_project 9 62786969 62798436 - MGP_NODShiLtJ_P0092176 Tbc1d21 protein_coding protein_coding MGP_NODShiLtJ_T0094181.1 MGP_NODShiLtJ_G0035106.1 mouse_genomes_project 9 119132660 119139084 - MGP_NODShiLtJ_P0094181 Wdr6 protein_coding protein_coding MGP_NODShiLtJ_T0092369.1 MGP_NODShiLtJ_G0034737.1 mouse_genomes_project 9 69239932 69273911 + MGP_NODShiLtJ_P0092369 Tipin protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091450.1 MGP_NODShiLtJ_G0034448.1 mouse_genomes_project 9 42525628 42526564 + MGP_NODShiLtJ_P0091450 Olfr969 protein_coding protein_coding MGP_NODShiLtJ_T0092905.1 MGP_NODShiLtJ_G0034869.1 mouse_genomes_project 9 85251727 85302060 - MGP_NODShiLtJ_P0092905 Slc17a5 protein_coding protein_coding MGP_NODShiLtJ_T0092906.1 MGP_NODShiLtJ_G0034869.1 mouse_genomes_project 9 85251745 85302034 - MGP_NODShiLtJ_P0092906 Slc17a5 protein_coding protein_coding MGP_NODShiLtJ_T0092907.1 MGP_NODShiLtJ_G0034869.1 mouse_genomes_project 9 85282387 85302046 - MGP_NODShiLtJ_P0092907 Slc17a5 protein_coding protein_coding MGP_NODShiLtJ_T0092602.1 MGP_NODShiLtJ_G0034795.1 mouse_genomes_project 9 75740650 75943524 + MGP_NODShiLtJ_P0092602 Myo1e protein_coding protein_coding MGP_NODShiLtJ_T0091458.1 MGP_NODShiLtJ_G0034456.1 mouse_genomes_project 9 42800159 42801156 + MGP_NODShiLtJ_P0091458 Olfr981 protein_coding protein_coding MGP_NODShiLtJ_T0091381.1 MGP_NODShiLtJ_G0034391.1 mouse_genomes_project 9 40364432 40365381 + MGP_NODShiLtJ_P0091381 Olfr894 protein_coding protein_coding MGP_NODShiLtJ_T0015918.1 MGP_NODShiLtJ_G0014026.1 mouse_genomes_project 9 36923658 36923976 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099611.1 MGP_NODShiLtJ_G0038005.1 mouse_genomes_project 9 71082056 71082163 + Gm23248 snRNA snRNA MGP_NODShiLtJ_T0090877.1 MGP_NODShiLtJ_G0034205.1 mouse_genomes_project 9 20017585 20018620 - MGP_NODShiLtJ_P0090877 Olfr862 protein_coding protein_coding MGP_NODShiLtJ_T0009153.1 MGP_NODShiLtJ_G0007349.1 mouse_genomes_project 9 47299533 47314804 + lincRNA lincRNA MGP_NODShiLtJ_T0090832.1 MGP_NODShiLtJ_G0034172.1 mouse_genomes_project 9 14960370 15441580 - MGP_NODShiLtJ_P0090832 Fat3 protein_coding protein_coding MGP_NODShiLtJ_T0002417.1 MGP_NODShiLtJ_G0002326.1 mouse_genomes_project 9 120823759 120824756 + TEC TEC MGP_NODShiLtJ_T0091501.1 MGP_NODShiLtJ_G0034473.1 mouse_genomes_project 9 45006832 45172798 - MGP_NODShiLtJ_P0091501 Sorl1 protein_coding protein_coding MGP_NODShiLtJ_T0091502.1 MGP_NODShiLtJ_G0034473.1 mouse_genomes_project 9 45013417 45017822 - Sorl1 protein_coding retained_intron MGP_NODShiLtJ_T0091503.1 MGP_NODShiLtJ_G0034473.1 mouse_genomes_project 9 45020822 45027799 - Sorl1 protein_coding retained_intron MGP_NODShiLtJ_T0091504.1 MGP_NODShiLtJ_G0034473.1 mouse_genomes_project 9 45027736 45029066 - Sorl1 protein_coding processed_transcript MGP_NODShiLtJ_T0094115.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119039318 119050385 + MGP_NODShiLtJ_P0094115 Usp19 protein_coding protein_coding MGP_NODShiLtJ_T0094116.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119039556 119051023 + MGP_NODShiLtJ_P0094116 Usp19 protein_coding protein_coding MGP_NODShiLtJ_T0094117.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119039561 119051003 + MGP_NODShiLtJ_P0094117 Usp19 protein_coding protein_coding MGP_NODShiLtJ_T0094118.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119039561 119051003 + MGP_NODShiLtJ_P0094118 Usp19 protein_coding protein_coding MGP_NODShiLtJ_T0094119.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119039572 119051003 + MGP_NODShiLtJ_P0094119 Usp19 protein_coding protein_coding MGP_NODShiLtJ_T0094120.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119041379 119043611 + Usp19 protein_coding retained_intron MGP_NODShiLtJ_T0094121.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119042153 119042921 + MGP_NODShiLtJ_P0094121 Usp19 protein_coding protein_coding MGP_NODShiLtJ_T0094122.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119043028 119043881 + Usp19 protein_coding retained_intron MGP_NODShiLtJ_T0094123.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119043057 119044147 + Usp19 protein_coding retained_intron MGP_NODShiLtJ_T0094124.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119043318 119050385 + MGP_NODShiLtJ_P0094124 Usp19 protein_coding protein_coding MGP_NODShiLtJ_T0094125.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119044222 119045149 + Usp19 protein_coding retained_intron MGP_NODShiLtJ_T0094126.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119045032 119047243 + Usp19 protein_coding retained_intron MGP_NODShiLtJ_T0094127.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119045674 119047405 + Usp19 protein_coding retained_intron MGP_NODShiLtJ_T0094128.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119045774 119047883 + MGP_NODShiLtJ_P0094128 Usp19 protein_coding protein_coding MGP_NODShiLtJ_T0094129.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119047388 119048306 + Usp19 protein_coding retained_intron MGP_NODShiLtJ_T0094130.1 MGP_NODShiLtJ_G0035100.1 mouse_genomes_project 9 119048835 119050383 + Usp19 protein_coding retained_intron MGP_NODShiLtJ_T0002380.1 MGP_NODShiLtJ_G0002289.1 mouse_genomes_project 9 110593925 110594962 + TEC TEC MGP_NODShiLtJ_T0091875.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54545189 54562462 + Ppp2r1b protein_coding processed_transcript MGP_NODShiLtJ_T0091876.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54557694 54595446 + MGP_NODShiLtJ_P0091876 Ppp2r1b protein_coding protein_coding MGP_NODShiLtJ_T0091877.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54557694 54594014 + MGP_NODShiLtJ_P0091877 Ppp2r1b protein_coding protein_coding MGP_NODShiLtJ_T0091878.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54557707 54582657 + MGP_NODShiLtJ_P0091878 Ppp2r1b protein_coding protein_coding MGP_NODShiLtJ_T0091879.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54557727 54581313 + MGP_NODShiLtJ_P0091879 Ppp2r1b protein_coding protein_coding MGP_NODShiLtJ_T0091880.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54557733 54594021 + MGP_NODShiLtJ_P0091880 Ppp2r1b protein_coding protein_coding MGP_NODShiLtJ_T0091881.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54557734 54594014 + MGP_NODShiLtJ_P0091881 Ppp2r1b protein_coding protein_coding MGP_NODShiLtJ_T0091882.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54557736 54581160 + MGP_NODShiLtJ_P0091882 Ppp2r1b protein_coding protein_coding MGP_NODShiLtJ_T0091883.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54557749 54581633 + MGP_NODShiLtJ_P0091883 Ppp2r1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091884.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54570698 54581255 + MGP_NODShiLtJ_P0091884 Ppp2r1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091885.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54574334 54579288 + Ppp2r1b protein_coding processed_transcript MGP_NODShiLtJ_T0091886.1 MGP_NODShiLtJ_G0034591.1 mouse_genomes_project 9 54579310 54580362 + Ppp2r1b protein_coding retained_intron MGP_NODShiLtJ_T0002421.1 MGP_NODShiLtJ_G0002330.1 mouse_genomes_project 9 121414315 121416402 + TEC TEC MGP_NODShiLtJ_T0005376.1 MGP_NODShiLtJ_G0004551.1 mouse_genomes_project 9 48618433 48622218 - 1700003G13Rik antisense antisense MGP_NODShiLtJ_T0005377.1 MGP_NODShiLtJ_G0004551.1 mouse_genomes_project 9 48618434 48622239 - 1700003G13Rik antisense antisense MGP_NODShiLtJ_T0094490.1 MGP_NODShiLtJ_G0035160.1 mouse_genomes_project 9 121782538 121785391 + Als2cl protein_coding processed_transcript MGP_NODShiLtJ_T0094491.1 MGP_NODShiLtJ_G0035160.1 mouse_genomes_project 9 121782842 121803199 + MGP_NODShiLtJ_P0094491 Als2cl protein_coding protein_coding MGP_NODShiLtJ_T0094492.1 MGP_NODShiLtJ_G0035160.1 mouse_genomes_project 9 121782874 121803205 + MGP_NODShiLtJ_P0094492 Als2cl protein_coding protein_coding MGP_NODShiLtJ_T0094493.1 MGP_NODShiLtJ_G0035160.1 mouse_genomes_project 9 121782901 121787562 + MGP_NODShiLtJ_P0094493 Als2cl protein_coding protein_coding MGP_NODShiLtJ_T0094494.1 MGP_NODShiLtJ_G0035160.1 mouse_genomes_project 9 121783005 121803202 + MGP_NODShiLtJ_P0094494 Als2cl protein_coding protein_coding MGP_NODShiLtJ_T0094495.1 MGP_NODShiLtJ_G0035160.1 mouse_genomes_project 9 121788429 121789990 + Als2cl protein_coding retained_intron MGP_NODShiLtJ_T0094496.1 MGP_NODShiLtJ_G0035160.1 mouse_genomes_project 9 121788970 121792816 + Als2cl protein_coding retained_intron MGP_NODShiLtJ_T0094497.1 MGP_NODShiLtJ_G0035160.1 mouse_genomes_project 9 121790658 121803203 + Als2cl protein_coding processed_transcript MGP_NODShiLtJ_T0005408.1 MGP_NODShiLtJ_G0004569.1 mouse_genomes_project 9 72106433 72107268 + Gm17098 antisense antisense MGP_NODShiLtJ_T0098107.1 MGP_NODShiLtJ_G0036519.1 mouse_genomes_project 9 67322240 67322349 + n-R5s84 rRNA rRNA MGP_NODShiLtJ_T0091684.1 MGP_NODShiLtJ_G0034533.1 mouse_genomes_project 9 48479109 48491249 + BC049352 protein_coding lincRNA MGP_NODShiLtJ_T0091685.1 MGP_NODShiLtJ_G0034533.1 mouse_genomes_project 9 48479136 48549230 + BC049352 protein_coding lincRNA MGP_NODShiLtJ_T0091686.1 MGP_NODShiLtJ_G0034533.1 mouse_genomes_project 9 48494046 48549230 + BC049352 protein_coding lincRNA MGP_NODShiLtJ_T0091687.1 MGP_NODShiLtJ_G0034533.1 mouse_genomes_project 9 48494046 48549191 + MGP_NODShiLtJ_P0091687 BC049352 protein_coding protein_coding MGP_NODShiLtJ_T0091606.1 MGP_NODShiLtJ_G0034512.1 mouse_genomes_project 9 47726794 47741385 - MGP_NODShiLtJ_P0091606 Cxcr5 protein_coding protein_coding MGP_NODShiLtJ_T0091607.1 MGP_NODShiLtJ_G0034512.1 mouse_genomes_project 9 47726794 47775056 - MGP_NODShiLtJ_P0091607 Cxcr5 protein_coding protein_coding MGP_NODShiLtJ_T0094321.1 MGP_NODShiLtJ_G0035133.1 mouse_genomes_project 9 120592385 120599568 + MGP_NODShiLtJ_P0094321 Spink8 protein_coding protein_coding MGP_NODShiLtJ_T0094322.1 MGP_NODShiLtJ_G0035133.1 mouse_genomes_project 9 120595519 120605646 + MGP_NODShiLtJ_P0094322 Spink8 protein_coding protein_coding MGP_NODShiLtJ_T0094323.1 MGP_NODShiLtJ_G0035133.1 mouse_genomes_project 9 120595602 120605641 + MGP_NODShiLtJ_P0094323 Spink8 protein_coding protein_coding MGP_NODShiLtJ_T0091801.1 MGP_NODShiLtJ_G0034571.1 mouse_genomes_project 9 53041527 53059505 - MGP_NODShiLtJ_P0091801 Ankk1 protein_coding protein_coding MGP_NODShiLtJ_T0092616.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76709564 76764971 - MGP_NODShiLtJ_P0092616 Aqp9 protein_coding protein_coding MGP_NODShiLtJ_T0092617.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76709566 76764942 - MGP_NODShiLtJ_P0092617 Aqp9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092618.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76709567 76764315 - MGP_NODShiLtJ_P0092618 Aqp9 protein_coding protein_coding MGP_NODShiLtJ_T0092619.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76710749 76771326 - MGP_NODShiLtJ_P0092619 Aqp9 protein_coding protein_coding MGP_NODShiLtJ_T0092620.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76764654 76767899 - Aqp9 protein_coding processed_transcript MGP_NODShiLtJ_T0092621.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76764710 76770562 - Aqp9 protein_coding processed_transcript MGP_NODShiLtJ_T0092622.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76765156 76771351 - Aqp9 protein_coding processed_transcript MGP_NODShiLtJ_T0092623.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76765156 76770302 - Aqp9 protein_coding processed_transcript MGP_NODShiLtJ_T0092624.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76765157 76771346 - Aqp9 protein_coding processed_transcript MGP_NODShiLtJ_T0092625.1 MGP_NODShiLtJ_G0034803.1 mouse_genomes_project 9 76767813 76770518 - Aqp9 protein_coding processed_transcript MGP_NODShiLtJ_T0100900.1 MGP_NODShiLtJ_G0039294.1 mouse_genomes_project 9 76023048 76023161 + Gm24615 snoRNA snoRNA MGP_NODShiLtJ_T0091367.1 MGP_NODShiLtJ_G0034378.1 mouse_genomes_project 9 39950276 39951212 + MGP_NODShiLtJ_P0091367 Olfr877 protein_coding protein_coding MGP_NODShiLtJ_T0100877.1 MGP_NODShiLtJ_G0039271.1 mouse_genomes_project 9 39131835 39131950 - Gm25273 snoRNA snoRNA MGP_NODShiLtJ_T0091137.1 MGP_NODShiLtJ_G0034308.1 mouse_genomes_project 9 28389614 28394500 + MGP_NODShiLtJ_P0091137 Spata19 protein_coding protein_coding MGP_NODShiLtJ_T0094618.1 MGP_NODShiLtJ_G0035185.1 mouse_genomes_project 9 125754505 125764583 + MGP_NODShiLtJ_P0094618 Tmppe protein_coding protein_coding MGP_NODShiLtJ_T0015925.1 MGP_NODShiLtJ_G0014033.1 mouse_genomes_project 9 44678083 44679051 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093119.1 MGP_NODShiLtJ_G0034916.1 mouse_genomes_project 9 97881001 97920522 - MGP_NODShiLtJ_P0093119 AF529169 protein_coding protein_coding MGP_NODShiLtJ_T0093120.1 MGP_NODShiLtJ_G0034916.1 mouse_genomes_project 9 97886097 97898805 - MGP_NODShiLtJ_P0093120 AF529169 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015981.1 MGP_NODShiLtJ_G0014089.1 mouse_genomes_project 9 93686444 93687252 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091525.1 MGP_NODShiLtJ_G0034482.1 mouse_genomes_project 9 46371004 46396494 + MGP_NODShiLtJ_P0091525 protein_coding protein_coding MGP_NODShiLtJ_T0091526.1 MGP_NODShiLtJ_G0034482.1 mouse_genomes_project 9 46371041 46396492 + MGP_NODShiLtJ_P0091526 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091375.1 MGP_NODShiLtJ_G0034385.1 mouse_genomes_project 9 40193383 40194313 + MGP_NODShiLtJ_P0091375 Olfr887 protein_coding protein_coding MGP_NODShiLtJ_T0091138.1 MGP_NODShiLtJ_G0034309.1 mouse_genomes_project 9 28831076 28831820 + Opcml protein_coding processed_transcript MGP_NODShiLtJ_T0091139.1 MGP_NODShiLtJ_G0034309.1 mouse_genomes_project 9 28831248 30045678 + MGP_NODShiLtJ_P0091139 Opcml protein_coding protein_coding MGP_NODShiLtJ_T0091140.1 MGP_NODShiLtJ_G0034309.1 mouse_genomes_project 9 28831603 29082312 + Opcml protein_coding processed_transcript MGP_NODShiLtJ_T0091141.1 MGP_NODShiLtJ_G0034309.1 mouse_genomes_project 9 29474942 29477745 + Opcml protein_coding processed_transcript MGP_NODShiLtJ_T0091142.1 MGP_NODShiLtJ_G0034309.1 mouse_genomes_project 9 29475590 30041351 + MGP_NODShiLtJ_P0091142 Opcml protein_coding protein_coding MGP_NODShiLtJ_T0091143.1 MGP_NODShiLtJ_G0034309.1 mouse_genomes_project 9 29475876 29924105 + Opcml protein_coding retained_intron MGP_NODShiLtJ_T0091144.1 MGP_NODShiLtJ_G0034309.1 mouse_genomes_project 9 29475962 29746948 + Opcml protein_coding processed_transcript MGP_NODShiLtJ_T0090860.1 MGP_NODShiLtJ_G0034188.1 mouse_genomes_project 9 18535097 18536036 + MGP_NODShiLtJ_P0090860 Olfr834 protein_coding protein_coding MGP_NODShiLtJ_T0093978.1 MGP_NODShiLtJ_G0035076.1 mouse_genomes_project 9 118462290 118475226 + Gm20661 protein_coding retained_intron MGP_NODShiLtJ_T0093979.1 MGP_NODShiLtJ_G0035076.1 mouse_genomes_project 9 118462325 118474260 + Gm20661 protein_coding retained_intron MGP_NODShiLtJ_T0093980.1 MGP_NODShiLtJ_G0035076.1 mouse_genomes_project 9 118462519 118474781 + MGP_NODShiLtJ_P0093980 Gm20661 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002376.1 MGP_NODShiLtJ_G0002285.1 mouse_genomes_project 9 109022111 109024974 + TEC TEC MGP_NODShiLtJ_T0100862.1 MGP_NODShiLtJ_G0039256.1 mouse_genomes_project 9 14298972 14299105 + Gm22620 snoRNA snoRNA MGP_NODShiLtJ_T0010936.1 MGP_NODShiLtJ_G0009069.1 mouse_genomes_project 9 21274688 21274766 - Mir1900 miRNA miRNA MGP_NODShiLtJ_T0099589.1 MGP_NODShiLtJ_G0037983.1 mouse_genomes_project 9 20693045 20693159 + Gm23316 snRNA snRNA MGP_NODShiLtJ_T0093221.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105255641 105267397 + Atr protein_coding retained_intron MGP_NODShiLtJ_T0093222.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105255641 105363473 + MGP_NODShiLtJ_P0093222 Atr protein_coding protein_coding MGP_NODShiLtJ_T0093223.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105255683 105306938 + Atr protein_coding retained_intron MGP_NODShiLtJ_T0093224.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105255694 105262623 + Atr protein_coding retained_intron MGP_NODShiLtJ_T0093225.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105255699 105260806 + Atr protein_coding retained_intron MGP_NODShiLtJ_T0093226.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105255713 105269613 + Atr protein_coding retained_intron MGP_NODShiLtJ_T0093227.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105255769 105363445 + MGP_NODShiLtJ_P0093227 Atr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093228.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105288993 105292319 + Atr protein_coding retained_intron MGP_NODShiLtJ_T0093229.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105316988 105321144 + Atr protein_coding retained_intron MGP_NODShiLtJ_T0093230.1 MGP_NODShiLtJ_G0034940.1 mouse_genomes_project 9 105344258 105346033 + Atr protein_coding retained_intron MGP_NODShiLtJ_T0092495.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71762110 71844748 - MGP_NODShiLtJ_P0092495 Usp3 protein_coding protein_coding MGP_NODShiLtJ_T0092496.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71763693 71844606 - MGP_NODShiLtJ_P0092496 Usp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092497.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71764686 71844642 - MGP_NODShiLtJ_P0092497 Usp3 protein_coding protein_coding MGP_NODShiLtJ_T0092498.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71765336 71844564 - Usp3 protein_coding retained_intron MGP_NODShiLtJ_T0092499.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71765534 71844612 - MGP_NODShiLtJ_P0092499 Usp3 protein_coding protein_coding MGP_NODShiLtJ_T0092500.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71765708 71768175 - Usp3 protein_coding retained_intron MGP_NODShiLtJ_T0092501.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71765867 71768656 - Usp3 protein_coding retained_intron MGP_NODShiLtJ_T0092502.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71774758 71778500 - Usp3 protein_coding retained_intron MGP_NODShiLtJ_T0092503.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71775073 71790515 - Usp3 protein_coding processed_transcript MGP_NODShiLtJ_T0092504.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71795626 71817327 - Usp3 protein_coding retained_intron MGP_NODShiLtJ_T0092505.1 MGP_NODShiLtJ_G0034774.1 mouse_genomes_project 9 71798031 71826463 - Usp3 protein_coding processed_transcript MGP_NODShiLtJ_T0100869.1 MGP_NODShiLtJ_G0039263.1 mouse_genomes_project 9 21120006 21120091 + Gm24067 snoRNA snoRNA MGP_NODShiLtJ_T0092957.1 MGP_NODShiLtJ_G0034880.1 mouse_genomes_project 9 90220610 90241981 + MGP_NODShiLtJ_P0092957 Irak1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0092958.1 MGP_NODShiLtJ_G0034880.1 mouse_genomes_project 9 90220876 90240133 + MGP_NODShiLtJ_P0092958 Irak1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0091100.1 MGP_NODShiLtJ_G0034293.1 mouse_genomes_project 9 25396983 25457334 - MGP_NODShiLtJ_P0091100 Tbx20 protein_coding protein_coding MGP_NODShiLtJ_T0091101.1 MGP_NODShiLtJ_G0034293.1 mouse_genomes_project 9 25423327 25457334 - MGP_NODShiLtJ_P0091101 Tbx20 protein_coding protein_coding MGP_NODShiLtJ_T0091156.1 MGP_NODShiLtJ_G0034311.1 mouse_genomes_project 9 31687611 31727057 + MGP_NODShiLtJ_P0091156 Snx19 protein_coding protein_coding MGP_NODShiLtJ_T0016007.1 MGP_NODShiLtJ_G0014115.1 mouse_genomes_project 9 103681075 103681421 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091896.1 MGP_NODShiLtJ_G0034593.1 mouse_genomes_project 9 54766861 54789626 - MGP_NODShiLtJ_P0091896 Layn protein_coding protein_coding MGP_NODShiLtJ_T0002326.1 MGP_NODShiLtJ_G0002236.1 mouse_genomes_project 9 78177412 78180630 + TEC TEC MGP_NODShiLtJ_T0092424.1 MGP_NODShiLtJ_G0034758.1 mouse_genomes_project 9 70582063 70598870 - MGP_NODShiLtJ_P0092424 Ankdd1a protein_coding protein_coding MGP_NODShiLtJ_T0092425.1 MGP_NODShiLtJ_G0034758.1 mouse_genomes_project 9 70582063 70603520 - MGP_NODShiLtJ_P0092425 Ankdd1a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100888.1 MGP_NODShiLtJ_G0039282.1 mouse_genomes_project 9 57575347 57575476 + Gm22304 snoRNA snoRNA MGP_NODShiLtJ_T0091261.1 MGP_NODShiLtJ_G0034338.1 mouse_genomes_project 9 37221049 37366421 + MGP_NODShiLtJ_P0091261 Pate2 protein_coding protein_coding MGP_NODShiLtJ_T0091262.1 MGP_NODShiLtJ_G0034338.1 mouse_genomes_project 9 37225583 37318108 + Pate2 protein_coding processed_transcript MGP_NODShiLtJ_T0091265.1 MGP_NODShiLtJ_G0034338.1 mouse_genomes_project 9 37342601 37345862 + MGP_NODShiLtJ_P0091265 Pate2 protein_coding protein_coding MGP_NODShiLtJ_T0091266.1 MGP_NODShiLtJ_G0034338.1 mouse_genomes_project 9 37342613 37344380 + Pate2 protein_coding retained_intron MGP_NODShiLtJ_T0091472.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43148404 43203648 - MGP_NODShiLtJ_P0091472 Gramd1b protein_coding protein_coding MGP_NODShiLtJ_T0091473.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43148410 43409659 - MGP_NODShiLtJ_P0091473 Gramd1b protein_coding protein_coding MGP_NODShiLtJ_T0091474.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43148413 43203270 - MGP_NODShiLtJ_P0091474 Gramd1b protein_coding protein_coding MGP_NODShiLtJ_T0091475.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43148416 43328372 - MGP_NODShiLtJ_P0091475 Gramd1b protein_coding protein_coding MGP_NODShiLtJ_T0091476.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43153046 43254503 - MGP_NODShiLtJ_P0091476 Gramd1b protein_coding protein_coding MGP_NODShiLtJ_T0091477.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43153077 43328466 - MGP_NODShiLtJ_P0091477 Gramd1b protein_coding protein_coding MGP_NODShiLtJ_T0091478.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43155196 43162162 - Gramd1b protein_coding retained_intron MGP_NODShiLtJ_T0091479.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43172943 43190857 - Gramd1b protein_coding retained_intron MGP_NODShiLtJ_T0091480.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43173707 43254801 - Gramd1b protein_coding processed_transcript MGP_NODShiLtJ_T0091481.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43173709 43254787 - Gramd1b protein_coding processed_transcript MGP_NODShiLtJ_T0091482.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43190814 43340636 - Gramd1b protein_coding processed_transcript MGP_NODShiLtJ_T0091483.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43190827 43340626 - Gramd1b protein_coding processed_transcript MGP_NODShiLtJ_T0091484.1 MGP_NODShiLtJ_G0034465.1 mouse_genomes_project 9 43190874 43236220 - Gramd1b protein_coding processed_transcript MGP_NODShiLtJ_T0090718.1 MGP_NODShiLtJ_G0034135.1 mouse_genomes_project 9 6016802 6108511 - MGP_NODShiLtJ_P0090718 Cep126 protein_coding protein_coding MGP_NODShiLtJ_T0091172.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32693694 32732085 + MGP_NODShiLtJ_P0091172 Nfrkb protein_coding protein_coding MGP_NODShiLtJ_T0091173.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32693699 32732085 + MGP_NODShiLtJ_P0091173 Nfrkb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091174.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32693706 32704296 + MGP_NODShiLtJ_P0091174 Nfrkb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091175.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32693708 32730932 + MGP_NODShiLtJ_P0091175 Nfrkb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091176.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32693715 32732085 + MGP_NODShiLtJ_P0091176 Nfrkb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091177.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32693716 32730932 + MGP_NODShiLtJ_P0091177 Nfrkb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091178.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32702338 32708615 + Nfrkb protein_coding retained_intron MGP_NODShiLtJ_T0091179.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32706648 32708587 + Nfrkb protein_coding retained_intron MGP_NODShiLtJ_T0091180.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32708635 32732085 + Nfrkb protein_coding retained_intron MGP_NODShiLtJ_T0091181.1 MGP_NODShiLtJ_G0034318.1 mouse_genomes_project 9 32717394 32718440 + Nfrkb protein_coding retained_intron MGP_NODShiLtJ_T0005366.1 MGP_NODShiLtJ_G0004542.1 mouse_genomes_project 9 33937270 33945676 + Gm27201 antisense antisense MGP_NODShiLtJ_T0094780.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 132904033 133053837 - Ulk4 protein_coding processed_transcript MGP_NODShiLtJ_T0094781.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 132908234 132985908 - Ulk4 protein_coding retained_intron MGP_NODShiLtJ_T0094782.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 132908234 133230146 - MGP_NODShiLtJ_P0094782 Ulk4 protein_coding protein_coding MGP_NODShiLtJ_T0094783.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 132910182 133230119 - MGP_NODShiLtJ_P0094783 Ulk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094784.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 133018249 133230130 - MGP_NODShiLtJ_P0094784 Ulk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094785.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 133018253 133230121 - MGP_NODShiLtJ_P0094785 Ulk4 protein_coding protein_coding MGP_NODShiLtJ_T0094786.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 133046190 133230146 - Ulk4 protein_coding retained_intron MGP_NODShiLtJ_T0094787.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 133106371 133208875 - MGP_NODShiLtJ_P0094787 Ulk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094788.1 MGP_NODShiLtJ_G0035239.1 mouse_genomes_project 9 133109827 133138281 - Ulk4 protein_coding processed_transcript MGP_NODShiLtJ_T0091589.1 MGP_NODShiLtJ_G0034502.1 mouse_genomes_project 9 47540909 47550368 - MGP_NODShiLtJ_P0091589 Hmbs protein_coding protein_coding MGP_NODShiLtJ_T0091930.1 MGP_NODShiLtJ_G0034611.1 mouse_genomes_project 9 57514788 57546040 - MGP_NODShiLtJ_P0091930 Acat1 protein_coding protein_coding MGP_NODShiLtJ_T0091931.1 MGP_NODShiLtJ_G0034611.1 mouse_genomes_project 9 57516753 57518024 - Acat1 protein_coding processed_transcript MGP_NODShiLtJ_T0091932.1 MGP_NODShiLtJ_G0034611.1 mouse_genomes_project 9 57532507 57545988 - Acat1 protein_coding retained_intron MGP_NODShiLtJ_T0016006.1 MGP_NODShiLtJ_G0014114.1 mouse_genomes_project 9 103672032 103672606 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091455.1 MGP_NODShiLtJ_G0034453.1 mouse_genomes_project 9 42719923 42722736 - MGP_NODShiLtJ_P0091455 Olfr976 protein_coding protein_coding MGP_NODShiLtJ_T0016005.1 MGP_NODShiLtJ_G0014113.1 mouse_genomes_project 9 102480146 102481149 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093892.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118140647 118172555 - MGP_NODShiLtJ_P0093892 Sema3f protein_coding protein_coding MGP_NODShiLtJ_T0093893.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118141566 118167637 - MGP_NODShiLtJ_P0093893 Sema3f protein_coding protein_coding MGP_NODShiLtJ_T0093894.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118142270 118143911 - Sema3f protein_coding retained_intron MGP_NODShiLtJ_T0093895.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118142270 118172099 - MGP_NODShiLtJ_P0093895 Sema3f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093896.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118143140 118147608 - MGP_NODShiLtJ_P0093896 Sema3f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093897.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118143156 118143947 - Sema3f protein_coding retained_intron MGP_NODShiLtJ_T0093898.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118143279 118143921 - Sema3f protein_coding retained_intron MGP_NODShiLtJ_T0093899.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118147565 118152986 - Sema3f protein_coding processed_transcript MGP_NODShiLtJ_T0093900.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118148032 118152914 - MGP_NODShiLtJ_P0093900 Sema3f protein_coding protein_coding MGP_NODShiLtJ_T0093901.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118148046 118150191 - Sema3f protein_coding retained_intron MGP_NODShiLtJ_T0093902.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118148616 118171560 - MGP_NODShiLtJ_P0093902 Sema3f protein_coding protein_coding MGP_NODShiLtJ_T0093903.1 MGP_NODShiLtJ_G0035067.1 mouse_genomes_project 9 118149959 118152975 - MGP_NODShiLtJ_P0093903 Sema3f protein_coding protein_coding MGP_NODShiLtJ_T0090649.1 MGP_NODShiLtJ_G0034112.1 mouse_genomes_project 9 1571025 2028439 - MGP_NODShiLtJ_P0090649 Gria4 protein_coding protein_coding MGP_NODShiLtJ_T0090650.1 MGP_NODShiLtJ_G0034112.1 mouse_genomes_project 9 1571025 2028439 - MGP_NODShiLtJ_P0090650 Gria4 protein_coding protein_coding MGP_NODShiLtJ_T0018410.1 MGP_NODShiLtJ_G0015621.1 mouse_genomes_project 9 108193820 108195184 - 4930579K19Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018411.1 MGP_NODShiLtJ_G0015621.1 mouse_genomes_project 9 108194051 108195203 - 4930579K19Rik processed_transcript TEC MGP_NODShiLtJ_T0018412.1 MGP_NODShiLtJ_G0015621.1 mouse_genomes_project 9 108194551 108195203 - 4930579K19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0091352.1 MGP_NODShiLtJ_G0034368.1 mouse_genomes_project 9 39534828 39539767 + MGP_NODShiLtJ_P0091352 Vsig2 protein_coding protein_coding MGP_NODShiLtJ_T0094733.1 MGP_NODShiLtJ_G0035222.1 mouse_genomes_project 9 131568531 131650197 - MGP_NODShiLtJ_P0094733 Scn11a protein_coding protein_coding MGP_NODShiLtJ_T0005432.1 MGP_NODShiLtJ_G0004587.1 mouse_genomes_project 9 103986406 103993019 - Gm16262 antisense antisense MGP_NODShiLtJ_T0094671.1 MGP_NODShiLtJ_G0035204.1 mouse_genomes_project 9 130221560 130305258 + MGP_NODShiLtJ_P0094671 Golga4 protein_coding protein_coding MGP_NODShiLtJ_T0091666.1 MGP_NODShiLtJ_G0034524.1 mouse_genomes_project 9 48267599 48272758 + MGP_NODShiLtJ_P0091666 Cd3d protein_coding protein_coding MGP_NODShiLtJ_T0091453.1 MGP_NODShiLtJ_G0034451.1 mouse_genomes_project 9 42693447 42694527 + MGP_NODShiLtJ_P0091453 Olfr974 protein_coding protein_coding MGP_NODShiLtJ_T0094642.1 MGP_NODShiLtJ_G0035198.1 mouse_genomes_project 9 127615462 127708595 - MGP_NODShiLtJ_P0094642 Tgfbr2 protein_coding protein_coding MGP_NODShiLtJ_T0094643.1 MGP_NODShiLtJ_G0035198.1 mouse_genomes_project 9 127615462 127708595 - MGP_NODShiLtJ_P0094643 Tgfbr2 protein_coding protein_coding MGP_NODShiLtJ_T0092303.1 MGP_NODShiLtJ_G0034719.1 mouse_genomes_project 9 67226317 67345735 - MGP_NODShiLtJ_P0092303 Coro2b protein_coding protein_coding MGP_NODShiLtJ_T0092304.1 MGP_NODShiLtJ_G0034719.1 mouse_genomes_project 9 67234334 67236748 - MGP_NODShiLtJ_P0092304 Coro2b protein_coding protein_coding MGP_NODShiLtJ_T0092305.1 MGP_NODShiLtJ_G0034719.1 mouse_genomes_project 9 67236682 67317211 - MGP_NODShiLtJ_P0092305 Coro2b protein_coding protein_coding MGP_NODShiLtJ_T0092306.1 MGP_NODShiLtJ_G0034719.1 mouse_genomes_project 9 67237009 67238001 - Coro2b protein_coding retained_intron MGP_NODShiLtJ_T0092307.1 MGP_NODShiLtJ_G0034719.1 mouse_genomes_project 9 67238084 67250292 - MGP_NODShiLtJ_P0092307 Coro2b protein_coding protein_coding MGP_NODShiLtJ_T0092308.1 MGP_NODShiLtJ_G0034719.1 mouse_genomes_project 9 67241239 67327927 - MGP_NODShiLtJ_P0092308 Coro2b protein_coding protein_coding MGP_NODShiLtJ_T0092309.1 MGP_NODShiLtJ_G0034719.1 mouse_genomes_project 9 67254062 67345651 - Coro2b protein_coding retained_intron MGP_NODShiLtJ_T0005422.1 MGP_NODShiLtJ_G0004581.1 mouse_genomes_project 9 86575980 86578112 + 4930562D21Rik antisense antisense MGP_NODShiLtJ_T0090872.1 MGP_NODShiLtJ_G0034200.1 mouse_genomes_project 9 19293425 19294373 - MGP_NODShiLtJ_P0090872 Olfr854 protein_coding protein_coding MGP_NODShiLtJ_T0090652.1 MGP_NODShiLtJ_G0034114.1 mouse_genomes_project 9 2689421 2715505 + MGP_NODShiLtJ_P0090652 protein_coding protein_coding MGP_NODShiLtJ_T0090653.1 MGP_NODShiLtJ_G0034114.1 mouse_genomes_project 9 2689442 2731361 + MGP_NODShiLtJ_P0090653 protein_coding protein_coding MGP_NODShiLtJ_T0090654.1 MGP_NODShiLtJ_G0034114.1 mouse_genomes_project 9 2689453 2723021 + protein_coding retained_intron MGP_NODShiLtJ_T0090655.1 MGP_NODShiLtJ_G0034114.1 mouse_genomes_project 9 2689453 2720415 + MGP_NODShiLtJ_P0090655 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090656.1 MGP_NODShiLtJ_G0034114.1 mouse_genomes_project 9 2689458 2704714 + protein_coding retained_intron MGP_NODShiLtJ_T0090657.1 MGP_NODShiLtJ_G0034114.1 mouse_genomes_project 9 2704372 2730667 + MGP_NODShiLtJ_P0090657 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090658.1 MGP_NODShiLtJ_G0034114.1 mouse_genomes_project 9 2715139 2719299 + protein_coding retained_intron MGP_NODShiLtJ_T0092335.1 MGP_NODShiLtJ_G0034730.1 mouse_genomes_project 9 68546664 68665643 - MGP_NODShiLtJ_P0092335 Smad3 protein_coding protein_coding MGP_NODShiLtJ_T0092336.1 MGP_NODShiLtJ_G0034730.1 mouse_genomes_project 9 68554665 68566413 - MGP_NODShiLtJ_P0092336 Smad3 protein_coding protein_coding MGP_NODShiLtJ_T0092337.1 MGP_NODShiLtJ_G0034730.1 mouse_genomes_project 9 68554693 68615952 - MGP_NODShiLtJ_P0092337 Smad3 protein_coding protein_coding MGP_NODShiLtJ_T0092338.1 MGP_NODShiLtJ_G0034730.1 mouse_genomes_project 9 68566013 68658777 - MGP_NODShiLtJ_P0092338 Smad3 protein_coding protein_coding MGP_NODShiLtJ_T0092339.1 MGP_NODShiLtJ_G0034730.1 mouse_genomes_project 9 68567678 68649079 - Smad3 protein_coding processed_transcript MGP_NODShiLtJ_T0092513.1 MGP_NODShiLtJ_G0034778.1 mouse_genomes_project 9 72081165 72106461 - MGP_NODShiLtJ_P0092513 Aph1c protein_coding protein_coding MGP_NODShiLtJ_T0092514.1 MGP_NODShiLtJ_G0034778.1 mouse_genomes_project 9 72086280 72106383 - MGP_NODShiLtJ_P0092514 Aph1c protein_coding protein_coding MGP_NODShiLtJ_T0092418.1 MGP_NODShiLtJ_G0034755.1 mouse_genomes_project 9 70481681 70494180 - MGP_NODShiLtJ_P0092418 Slc51b protein_coding protein_coding MGP_NODShiLtJ_T0091573.1 MGP_NODShiLtJ_G0034495.1 mouse_genomes_project 9 47443612 47447753 - MGP_NODShiLtJ_P0091573 Pdzd3 protein_coding protein_coding MGP_NODShiLtJ_T0090793.1 MGP_NODShiLtJ_G0034160.1 mouse_genomes_project 9 13839402 13857469 - MGP_NODShiLtJ_P0090793 Izumo1r protein_coding protein_coding MGP_NODShiLtJ_T0090794.1 MGP_NODShiLtJ_G0034160.1 mouse_genomes_project 9 13846635 13857534 - MGP_NODShiLtJ_P0090794 Izumo1r protein_coding protein_coding MGP_NODShiLtJ_T0090795.1 MGP_NODShiLtJ_G0034160.1 mouse_genomes_project 9 13853607 13857517 - MGP_NODShiLtJ_P0090795 Izumo1r protein_coding protein_coding MGP_NODShiLtJ_T0090796.1 MGP_NODShiLtJ_G0034160.1 mouse_genomes_project 9 13853612 13857341 - MGP_NODShiLtJ_P0090796 Izumo1r protein_coding protein_coding MGP_NODShiLtJ_T0090797.1 MGP_NODShiLtJ_G0034160.1 mouse_genomes_project 9 13854354 13857339 - MGP_NODShiLtJ_P0090797 Izumo1r protein_coding protein_coding MGP_NODShiLtJ_T0091019.1 MGP_NODShiLtJ_G0034256.1 mouse_genomes_project 9 21898594 21902716 - MGP_NODShiLtJ_P0091019 Yipf2 protein_coding protein_coding MGP_NODShiLtJ_T0091020.1 MGP_NODShiLtJ_G0034256.1 mouse_genomes_project 9 21898594 21902716 - MGP_NODShiLtJ_P0091020 Yipf2 protein_coding protein_coding MGP_NODShiLtJ_T0091021.1 MGP_NODShiLtJ_G0034256.1 mouse_genomes_project 9 21898594 21902716 - MGP_NODShiLtJ_P0091021 Yipf2 protein_coding protein_coding MGP_NODShiLtJ_T0092026.1 MGP_NODShiLtJ_G0034642.1 mouse_genomes_project 9 59630589 60055927 - MGP_NODShiLtJ_P0092026 Scaper protein_coding protein_coding MGP_NODShiLtJ_T0092027.1 MGP_NODShiLtJ_G0034642.1 mouse_genomes_project 9 59850832 60051948 - MGP_NODShiLtJ_P0092027 Scaper protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091676.1 MGP_NODShiLtJ_G0034530.1 mouse_genomes_project 9 48412317 48424557 + MGP_NODShiLtJ_P0091676 Scn2b protein_coding protein_coding MGP_NODShiLtJ_T0091677.1 MGP_NODShiLtJ_G0034530.1 mouse_genomes_project 9 48412322 48424555 + MGP_NODShiLtJ_P0091677 Scn2b protein_coding protein_coding MGP_NODShiLtJ_T0094271.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119587969 119608066 + MGP_NODShiLtJ_P0094271 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094272.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119587989 119608013 + MGP_NODShiLtJ_P0094272 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094273.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119588006 119608013 + Shisa5 protein_coding retained_intron MGP_NODShiLtJ_T0094274.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119589820 119607032 + MGP_NODShiLtJ_P0094274 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094275.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119590045 119601598 + MGP_NODShiLtJ_P0094275 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094276.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601303 119607244 + MGP_NODShiLtJ_P0094276 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094277.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601362 119606667 + MGP_NODShiLtJ_P0094277 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094278.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601366 119607313 + MGP_NODShiLtJ_P0094278 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094279.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601387 119606641 + MGP_NODShiLtJ_P0094279 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094280.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601405 119607302 + MGP_NODShiLtJ_P0094280 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094281.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601407 119606700 + MGP_NODShiLtJ_P0094281 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094282.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601409 119607020 + MGP_NODShiLtJ_P0094282 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094283.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601418 119606663 + MGP_NODShiLtJ_P0094283 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094284.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119601642 119607147 + MGP_NODShiLtJ_P0094284 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094285.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119603061 119606991 + Shisa5 protein_coding processed_transcript MGP_NODShiLtJ_T0094286.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119605104 119607496 + MGP_NODShiLtJ_P0094286 Shisa5 protein_coding protein_coding MGP_NODShiLtJ_T0094287.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119605189 119606840 + Shisa5 protein_coding processed_transcript MGP_NODShiLtJ_T0094288.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119605253 119606780 + Shisa5 protein_coding processed_transcript MGP_NODShiLtJ_T0094289.1 MGP_NODShiLtJ_G0035120.1 mouse_genomes_project 9 119606228 119606764 + Shisa5 protein_coding retained_intron MGP_NODShiLtJ_T0009199.1 MGP_NODShiLtJ_G0007386.1 mouse_genomes_project 9 87048238 87050692 - Gm17477 lincRNA lincRNA MGP_NODShiLtJ_T0094324.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612301 120623550 + MGP_NODShiLtJ_P0094324 Nme6 protein_coding protein_coding MGP_NODShiLtJ_T0094325.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612307 120623986 + MGP_NODShiLtJ_P0094325 Nme6 protein_coding protein_coding MGP_NODShiLtJ_T0094326.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612323 120613142 + Nme6 protein_coding retained_intron MGP_NODShiLtJ_T0094327.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612323 120623896 + Nme6 protein_coding processed_transcript MGP_NODShiLtJ_T0094328.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612333 120623059 + MGP_NODShiLtJ_P0094328 Nme6 protein_coding protein_coding MGP_NODShiLtJ_T0094329.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612338 120623680 + Nme6 protein_coding processed_transcript MGP_NODShiLtJ_T0094330.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612339 120623977 + Nme6 protein_coding processed_transcript MGP_NODShiLtJ_T0094331.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612359 120615177 + Nme6 protein_coding retained_intron MGP_NODShiLtJ_T0094332.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612438 120623607 + MGP_NODShiLtJ_P0094332 Nme6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094333.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612599 120623601 + Nme6 protein_coding processed_transcript MGP_NODShiLtJ_T0094334.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612743 120622600 + Nme6 protein_coding retained_intron MGP_NODShiLtJ_T0094335.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612745 120623568 + Nme6 protein_coding processed_transcript MGP_NODShiLtJ_T0094336.1 MGP_NODShiLtJ_G0035134.1 mouse_genomes_project 9 120612843 120624137 + Nme6 protein_coding processed_transcript MGP_NODShiLtJ_T0015914.1 MGP_NODShiLtJ_G0014022.1 mouse_genomes_project 9 34067828 34068246 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092096.1 MGP_NODShiLtJ_G0034665.1 mouse_genomes_project 9 61850415 61863866 + MGP_NODShiLtJ_P0092096 Cox5a protein_coding protein_coding MGP_NODShiLtJ_T0090742.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12613103 12670778 + MGP_NODShiLtJ_P0090742 Mtmr2 protein_coding protein_coding MGP_NODShiLtJ_T0090743.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12613874 12670778 + MGP_NODShiLtJ_P0090743 Mtmr2 protein_coding protein_coding MGP_NODShiLtJ_T0090744.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12613878 12647388 + Mtmr2 protein_coding processed_transcript MGP_NODShiLtJ_T0090745.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12613890 12670778 + MGP_NODShiLtJ_P0090745 Mtmr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090746.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12614012 12649902 + MGP_NODShiLtJ_P0090746 Mtmr2 protein_coding protein_coding MGP_NODShiLtJ_T0090747.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12614082 12649902 + MGP_NODShiLtJ_P0090747 Mtmr2 protein_coding protein_coding MGP_NODShiLtJ_T0090748.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12628102 12656281 + MGP_NODShiLtJ_P0090748 Mtmr2 protein_coding protein_coding MGP_NODShiLtJ_T0090749.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12628865 12649900 + Mtmr2 protein_coding processed_transcript MGP_NODShiLtJ_T0090750.1 MGP_NODShiLtJ_G0034146.1 mouse_genomes_project 9 12660214 12670777 + Mtmr2 protein_coding retained_intron MGP_NODShiLtJ_T0093296.1 MGP_NODShiLtJ_G0034950.1 mouse_genomes_project 9 106612914 106653911 - MGP_NODShiLtJ_P0093296 Slc25a36 protein_coding protein_coding MGP_NODShiLtJ_T0093297.1 MGP_NODShiLtJ_G0034950.1 mouse_genomes_project 9 106613518 106623189 - MGP_NODShiLtJ_P0093297 Slc25a36 protein_coding protein_coding MGP_NODShiLtJ_T0093298.1 MGP_NODShiLtJ_G0034950.1 mouse_genomes_project 9 106629290 106641102 - MGP_NODShiLtJ_P0093298 Slc25a36 protein_coding protein_coding MGP_NODShiLtJ_T0093299.1 MGP_NODShiLtJ_G0034950.1 mouse_genomes_project 9 106633686 106653741 - Slc25a36 protein_coding retained_intron MGP_NODShiLtJ_T0093300.1 MGP_NODShiLtJ_G0034950.1 mouse_genomes_project 9 106640184 106653787 - Slc25a36 protein_coding retained_intron MGP_NODShiLtJ_T0093736.1 MGP_NODShiLtJ_G0035044.1 mouse_genomes_project 9 117197184 117254712 - MGP_NODShiLtJ_P0093736 Manf protein_coding protein_coding MGP_NODShiLtJ_T0093738.1 MGP_NODShiLtJ_G0035044.1 mouse_genomes_project 9 117231130 117253124 - MGP_NODShiLtJ_P0093738 Manf protein_coding protein_coding MGP_NODShiLtJ_T0093742.1 MGP_NODShiLtJ_G0035044.1 mouse_genomes_project 9 117250256 117254819 - MGP_NODShiLtJ_P0093742 Manf protein_coding protein_coding MGP_NODShiLtJ_T0093743.1 MGP_NODShiLtJ_G0035044.1 mouse_genomes_project 9 117251594 117254255 - MGP_NODShiLtJ_P0093743 Manf protein_coding protein_coding MGP_NODShiLtJ_T0093744.1 MGP_NODShiLtJ_G0035044.1 mouse_genomes_project 9 117251925 117254710 - MGP_NODShiLtJ_P0093744 Manf protein_coding protein_coding MGP_NODShiLtJ_T0093745.1 MGP_NODShiLtJ_G0035044.1 mouse_genomes_project 9 117252871 117254755 - Manf protein_coding retained_intron MGP_NODShiLtJ_T0093746.1 MGP_NODShiLtJ_G0035044.1 mouse_genomes_project 9 117253403 117254757 - Manf protein_coding retained_intron MGP_NODShiLtJ_T0016051.1 MGP_NODShiLtJ_G0014159.1 mouse_genomes_project 9 132248292 132248719 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091222.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36844436 36851173 - MGP_NODShiLtJ_P0091222 Foxred1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091223.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36844438 36851191 - Foxred1 protein_coding retained_intron MGP_NODShiLtJ_T0091224.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36844438 36851207 - Foxred1 protein_coding retained_intron MGP_NODShiLtJ_T0091225.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36844438 36851292 - MGP_NODShiLtJ_P0091225 Foxred1 protein_coding protein_coding MGP_NODShiLtJ_T0091226.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36844438 36851238 - MGP_NODShiLtJ_P0091226 Foxred1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091227.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36844438 36851217 - MGP_NODShiLtJ_P0091227 Foxred1 protein_coding protein_coding MGP_NODShiLtJ_T0091228.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36845095 36846152 - Foxred1 protein_coding retained_intron MGP_NODShiLtJ_T0091229.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36845414 36846464 - MGP_NODShiLtJ_P0091229 Foxred1 protein_coding protein_coding MGP_NODShiLtJ_T0091230.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36846316 36851183 - Foxred1 protein_coding retained_intron MGP_NODShiLtJ_T0091231.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36846452 36851233 - MGP_NODShiLtJ_P0091231 Foxred1 protein_coding protein_coding MGP_NODShiLtJ_T0091232.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36847767 36851159 - MGP_NODShiLtJ_P0091232 Foxred1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091233.1 MGP_NODShiLtJ_G0034331.1 mouse_genomes_project 9 36847777 36851134 - MGP_NODShiLtJ_P0091233 Foxred1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093522.1 MGP_NODShiLtJ_G0035005.1 mouse_genomes_project 9 114184724 114186672 + Acad11 protein_coding retained_intron MGP_NODShiLtJ_T0093523.1 MGP_NODShiLtJ_G0035005.1 mouse_genomes_project 9 114184763 114262875 + MGP_NODShiLtJ_P0093523 Acad11 protein_coding protein_coding MGP_NODShiLtJ_T0093525.1 MGP_NODShiLtJ_G0035005.1 mouse_genomes_project 9 114219820 114247711 + Acad11 protein_coding processed_transcript MGP_NODShiLtJ_T0093526.1 MGP_NODShiLtJ_G0035005.1 mouse_genomes_project 9 114225455 114242262 + MGP_NODShiLtJ_P0093526 Acad11 protein_coding protein_coding MGP_NODShiLtJ_T0093529.1 MGP_NODShiLtJ_G0035005.1 mouse_genomes_project 9 114244619 114248049 + Acad11 protein_coding retained_intron MGP_NODShiLtJ_T0093530.1 MGP_NODShiLtJ_G0035005.1 mouse_genomes_project 9 114259058 114262240 + Acad11 protein_coding processed_transcript MGP_NODShiLtJ_T0099637.1 MGP_NODShiLtJ_G0038031.1 mouse_genomes_project 9 113630634 113630737 - Gm26360 snRNA snRNA MGP_NODShiLtJ_T0009142.1 MGP_NODShiLtJ_G0007341.1 mouse_genomes_project 9 37165238 37167185 - lincRNA lincRNA MGP_NODShiLtJ_T0005367.1 MGP_NODShiLtJ_G0004543.1 mouse_genomes_project 9 34151084 34152604 - Gm27240 antisense antisense MGP_NODShiLtJ_T0091214.1 MGP_NODShiLtJ_G0034329.1 mouse_genomes_project 9 36823979 36840786 - MGP_NODShiLtJ_P0091214 Tirap protein_coding protein_coding MGP_NODShiLtJ_T0091215.1 MGP_NODShiLtJ_G0034329.1 mouse_genomes_project 9 36827364 36840483 - MGP_NODShiLtJ_P0091215 Tirap protein_coding protein_coding MGP_NODShiLtJ_T0091216.1 MGP_NODShiLtJ_G0034329.1 mouse_genomes_project 9 36827364 36840423 - MGP_NODShiLtJ_P0091216 Tirap protein_coding protein_coding MGP_NODShiLtJ_T0091217.1 MGP_NODShiLtJ_G0034329.1 mouse_genomes_project 9 36827926 36840465 - MGP_NODShiLtJ_P0091217 Tirap protein_coding protein_coding MGP_NODShiLtJ_T0091218.1 MGP_NODShiLtJ_G0034329.1 mouse_genomes_project 9 36829323 36840378 - MGP_NODShiLtJ_P0091218 Tirap protein_coding protein_coding MGP_NODShiLtJ_T0091219.1 MGP_NODShiLtJ_G0034329.1 mouse_genomes_project 9 36829620 36831995 - MGP_NODShiLtJ_P0091219 Tirap protein_coding protein_coding MGP_NODShiLtJ_T0091220.1 MGP_NODShiLtJ_G0034329.1 mouse_genomes_project 9 36831631 36839994 - MGP_NODShiLtJ_P0091220 Tirap protein_coding protein_coding MGP_NODShiLtJ_T0093820.1 MGP_NODShiLtJ_G0035058.1 mouse_genomes_project 9 118021056 118025886 + MGP_NODShiLtJ_P0093820 Hyal2 protein_coding protein_coding MGP_NODShiLtJ_T0093821.1 MGP_NODShiLtJ_G0035058.1 mouse_genomes_project 9 118021056 118023501 + MGP_NODShiLtJ_P0093821 Hyal2 protein_coding protein_coding MGP_NODShiLtJ_T0093822.1 MGP_NODShiLtJ_G0035058.1 mouse_genomes_project 9 118022223 118025883 + MGP_NODShiLtJ_P0093822 Hyal2 protein_coding protein_coding MGP_NODShiLtJ_T0093823.1 MGP_NODShiLtJ_G0035058.1 mouse_genomes_project 9 118022247 118025070 + MGP_NODShiLtJ_P0093823 Hyal2 protein_coding protein_coding MGP_NODShiLtJ_T0093824.1 MGP_NODShiLtJ_G0035058.1 mouse_genomes_project 9 118022501 118023719 + MGP_NODShiLtJ_P0093824 Hyal2 protein_coding protein_coding MGP_NODShiLtJ_T0093825.1 MGP_NODShiLtJ_G0035058.1 mouse_genomes_project 9 118022911 118025879 + MGP_NODShiLtJ_P0093825 Hyal2 protein_coding protein_coding MGP_NODShiLtJ_T0093826.1 MGP_NODShiLtJ_G0035058.1 mouse_genomes_project 9 118024316 118025310 + Hyal2 protein_coding retained_intron MGP_NODShiLtJ_T0015991.1 MGP_NODShiLtJ_G0014099.1 mouse_genomes_project 9 96764702 96765033 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092997.1 MGP_NODShiLtJ_G0034885.1 mouse_genomes_project 9 91306245 91336575 - MGP_NODShiLtJ_P0092997 Elovl4 protein_coding protein_coding MGP_NODShiLtJ_T0092998.1 MGP_NODShiLtJ_G0034885.1 mouse_genomes_project 9 91309927 91336600 - MGP_NODShiLtJ_P0092998 Elovl4 protein_coding protein_coding MGP_NODShiLtJ_T0090767.1 MGP_NODShiLtJ_G0034150.1 mouse_genomes_project 9 13266140 13295521 - MGP_NODShiLtJ_P0090767 Endod1 protein_coding protein_coding MGP_NODShiLtJ_T0099628.1 MGP_NODShiLtJ_G0038022.1 mouse_genomes_project 9 94685660 94685774 - Gm25949 snRNA snRNA MGP_NODShiLtJ_T0010941.1 MGP_NODShiLtJ_G0009074.1 mouse_genomes_project 9 22499201 22499271 - Mir7084 miRNA miRNA MGP_NODShiLtJ_T0015917.1 MGP_NODShiLtJ_G0014025.1 mouse_genomes_project 9 35834513 35835075 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005481.1 MGP_NODShiLtJ_G0004619.1 mouse_genomes_project 9 118413553 118414871 - Gm37974 antisense antisense MGP_NODShiLtJ_T0099587.1 MGP_NODShiLtJ_G0037981.1 mouse_genomes_project 9 20356864 20357017 + Gm25914 snRNA snRNA MGP_NODShiLtJ_T0099633.1 MGP_NODShiLtJ_G0038027.1 mouse_genomes_project 9 103547950 103548107 + Gm24200 snRNA snRNA MGP_NODShiLtJ_T0091788.1 MGP_NODShiLtJ_G0034564.1 mouse_genomes_project 9 52486987 52499733 - MGP_NODShiLtJ_P0091788 Htr3a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091789.1 MGP_NODShiLtJ_G0034564.1 mouse_genomes_project 9 52486994 52499867 - MGP_NODShiLtJ_P0091789 Htr3a protein_coding protein_coding MGP_NODShiLtJ_T0005447.1 MGP_NODShiLtJ_G0004594.1 mouse_genomes_project 9 106204851 106210473 + A930006L05Rik antisense antisense MGP_NODShiLtJ_T0094884.1 MGP_NODShiLtJ_G0035273.1 mouse_genomes_project 9 135244012 135290749 - MGP_NODShiLtJ_P0094884 Cdcp1 protein_coding protein_coding MGP_NODShiLtJ_T0094885.1 MGP_NODShiLtJ_G0035273.1 mouse_genomes_project 9 135246252 135252640 - Cdcp1 protein_coding retained_intron MGP_NODShiLtJ_T0094886.1 MGP_NODShiLtJ_G0035273.1 mouse_genomes_project 9 135255296 135290710 - Cdcp1 protein_coding retained_intron MGP_NODShiLtJ_T0016047.1 MGP_NODShiLtJ_G0014155.1 mouse_genomes_project 9 128666439 128666990 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091162.1 MGP_NODShiLtJ_G0034315.1 mouse_genomes_project 9 32379612 32423643 - MGP_NODShiLtJ_P0091162 St14 protein_coding protein_coding MGP_NODShiLtJ_T0091163.1 MGP_NODShiLtJ_G0034315.1 mouse_genomes_project 9 32389525 32423586 - St14 protein_coding retained_intron MGP_NODShiLtJ_T0091164.1 MGP_NODShiLtJ_G0034315.1 mouse_genomes_project 9 32390125 32393042 - St14 protein_coding retained_intron MGP_NODShiLtJ_T0091165.1 MGP_NODShiLtJ_G0034315.1 mouse_genomes_project 9 32396260 32423586 - MGP_NODShiLtJ_P0091165 St14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092829.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533328 83572535 - protein_coding retained_intron MGP_NODShiLtJ_T0092830.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533328 83822944 - MGP_NODShiLtJ_P0092830 protein_coding protein_coding MGP_NODShiLtJ_T0092831.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533328 83822937 - MGP_NODShiLtJ_P0092831 protein_coding protein_coding MGP_NODShiLtJ_T0092832.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533333 83822875 - MGP_NODShiLtJ_P0092832 protein_coding protein_coding MGP_NODShiLtJ_T0092833.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533333 83822867 - MGP_NODShiLtJ_P0092833 protein_coding protein_coding MGP_NODShiLtJ_T0092834.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533336 83721935 - MGP_NODShiLtJ_P0092834 protein_coding protein_coding MGP_NODShiLtJ_T0092835.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533336 83822990 - MGP_NODShiLtJ_P0092835 protein_coding protein_coding MGP_NODShiLtJ_T0092836.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533359 83572284 - MGP_NODShiLtJ_P0092836 protein_coding protein_coding MGP_NODShiLtJ_T0092837.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533557 83721981 - MGP_NODShiLtJ_P0092837 protein_coding protein_coding MGP_NODShiLtJ_T0092838.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83533638 83721897 - MGP_NODShiLtJ_P0092838 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092839.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83598993 83822935 - MGP_NODShiLtJ_P0092839 protein_coding protein_coding MGP_NODShiLtJ_T0092840.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83696496 83822925 - MGP_NODShiLtJ_P0092840 protein_coding protein_coding MGP_NODShiLtJ_T0092841.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83696499 83721944 - MGP_NODShiLtJ_P0092841 protein_coding protein_coding MGP_NODShiLtJ_T0092842.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83696527 83811187 - MGP_NODShiLtJ_P0092842 protein_coding protein_coding MGP_NODShiLtJ_T0092843.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83719300 83722238 - protein_coding retained_intron MGP_NODShiLtJ_T0092844.1 MGP_NODShiLtJ_G0034848.1 mouse_genomes_project 9 83821503 83829439 - protein_coding processed_transcript MGP_NODShiLtJ_T0098115.1 MGP_NODShiLtJ_G0036527.1 mouse_genomes_project 9 112588782 112588894 + Gm25669 rRNA rRNA MGP_NODShiLtJ_T0093657.1 MGP_NODShiLtJ_G0035028.1 mouse_genomes_project 9 116751831 116757147 - MGP_NODShiLtJ_P0093657 Acy1 protein_coding protein_coding MGP_NODShiLtJ_T0093658.1 MGP_NODShiLtJ_G0035028.1 mouse_genomes_project 9 116751834 116757005 - Acy1 protein_coding retained_intron MGP_NODShiLtJ_T0093659.1 MGP_NODShiLtJ_G0035028.1 mouse_genomes_project 9 116751840 116753544 - Acy1 protein_coding retained_intron MGP_NODShiLtJ_T0093660.1 MGP_NODShiLtJ_G0035028.1 mouse_genomes_project 9 116753549 116755209 - Acy1 protein_coding retained_intron MGP_NODShiLtJ_T0093661.1 MGP_NODShiLtJ_G0035028.1 mouse_genomes_project 9 116753792 116757030 - MGP_NODShiLtJ_P0093661 Acy1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093662.1 MGP_NODShiLtJ_G0035028.1 mouse_genomes_project 9 116753923 116757147 - MGP_NODShiLtJ_P0093662 Acy1 protein_coding protein_coding MGP_NODShiLtJ_T0093663.1 MGP_NODShiLtJ_G0035028.1 mouse_genomes_project 9 116755724 116757015 - MGP_NODShiLtJ_P0093663 Acy1 protein_coding protein_coding MGP_NODShiLtJ_T0002304.1 MGP_NODShiLtJ_G0002214.1 mouse_genomes_project 9 33965045 33966810 - TEC TEC MGP_NODShiLtJ_T0009261.1 MGP_NODShiLtJ_G0007433.1 mouse_genomes_project 9 122514868 122519787 - Gm42523 lincRNA lincRNA MGP_NODShiLtJ_T0093791.1 MGP_NODShiLtJ_G0035052.1 mouse_genomes_project 9 117987082 117991815 + MGP_NODShiLtJ_P0093791 Tmem115 protein_coding protein_coding MGP_NODShiLtJ_T0093695.1 MGP_NODShiLtJ_G0035032.1 mouse_genomes_project 9 116784732 116786710 - MGP_NODShiLtJ_P0093695 Gpr62 protein_coding protein_coding MGP_NODShiLtJ_T0010933.1 MGP_NODShiLtJ_G0009066.1 mouse_genomes_project 9 14298625 14298692 + miRNA miRNA MGP_NODShiLtJ_T0090693.1 MGP_NODShiLtJ_G0034130.1 mouse_genomes_project 9 5668403 5699262 + MGP_NODShiLtJ_P0090693 Tmem123 protein_coding protein_coding MGP_NODShiLtJ_T0090694.1 MGP_NODShiLtJ_G0034130.1 mouse_genomes_project 9 5668511 5695977 + MGP_NODShiLtJ_P0090694 Tmem123 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090695.1 MGP_NODShiLtJ_G0034130.1 mouse_genomes_project 9 5668527 5699257 + MGP_NODShiLtJ_P0090695 Tmem123 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010964.1 MGP_NODShiLtJ_G0009097.1 mouse_genomes_project 9 67030799 67030904 - Gm25603 miRNA miRNA MGP_NODShiLtJ_T0097848.1 MGP_NODShiLtJ_G0036260.1 mouse_genomes_project 9 18760143 18761092 + pseudogene pseudogene MGP_NODShiLtJ_T0090688.1 MGP_NODShiLtJ_G0034126.1 mouse_genomes_project 9 5427255 5438757 + MGP_NODShiLtJ_P0090688 Mmp8 protein_coding protein_coding MGP_NODShiLtJ_T0015988.1 MGP_NODShiLtJ_G0014096.1 mouse_genomes_project 9 96402630 96403452 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091065.1 MGP_NODShiLtJ_G0034279.1 mouse_genomes_project 9 22551479 22552984 + MGP_NODShiLtJ_P0091065 Pigyl protein_coding protein_coding MGP_NODShiLtJ_T0091066.1 MGP_NODShiLtJ_G0034279.1 mouse_genomes_project 9 22551579 22552951 + MGP_NODShiLtJ_P0091066 Pigyl protein_coding protein_coding MGP_NODShiLtJ_T0009125.1 MGP_NODShiLtJ_G0007324.1 mouse_genomes_project 9 13795689 13797912 + Gm16302 lincRNA lincRNA MGP_NODShiLtJ_T0091693.1 MGP_NODShiLtJ_G0034537.1 mouse_genomes_project 9 48708542 48715687 + MGP_NODShiLtJ_P0091693 Fxyd2 protein_coding protein_coding MGP_NODShiLtJ_T0091694.1 MGP_NODShiLtJ_G0034537.1 mouse_genomes_project 9 48711554 48715672 + MGP_NODShiLtJ_P0091694 Fxyd2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0016053.1 MGP_NODShiLtJ_G0014161.1 mouse_genomes_project 9 135387314 135387719 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094843.1 MGP_NODShiLtJ_G0035258.1 mouse_genomes_project 9 134178062 134300722 - MGP_NODShiLtJ_P0094843 Ano10 protein_coding protein_coding MGP_NODShiLtJ_T0094108.1 MGP_NODShiLtJ_G0035099.1 mouse_genomes_project 9 119028452 119029098 + MGP_NODShiLtJ_P0094108 Lamb2 protein_coding protein_coding MGP_NODShiLtJ_T0094109.1 MGP_NODShiLtJ_G0035099.1 mouse_genomes_project 9 119028573 119039247 + MGP_NODShiLtJ_P0094109 Lamb2 protein_coding protein_coding MGP_NODShiLtJ_T0094110.1 MGP_NODShiLtJ_G0035099.1 mouse_genomes_project 9 119028588 119029370 + MGP_NODShiLtJ_P0094110 Lamb2 protein_coding protein_coding MGP_NODShiLtJ_T0094111.1 MGP_NODShiLtJ_G0035099.1 mouse_genomes_project 9 119028594 119029303 + MGP_NODShiLtJ_P0094111 Lamb2 protein_coding protein_coding MGP_NODShiLtJ_T0094112.1 MGP_NODShiLtJ_G0035099.1 mouse_genomes_project 9 119028597 119028901 + Lamb2 protein_coding retained_intron MGP_NODShiLtJ_T0094113.1 MGP_NODShiLtJ_G0035099.1 mouse_genomes_project 9 119036534 119037388 + Lamb2 protein_coding retained_intron MGP_NODShiLtJ_T0094114.1 MGP_NODShiLtJ_G0035099.1 mouse_genomes_project 9 119037593 119038249 + Lamb2 protein_coding retained_intron MGP_NODShiLtJ_T0005483.1 MGP_NODShiLtJ_G0004621.1 mouse_genomes_project 9 118478334 118482629 - 4930535L15Rik antisense antisense MGP_NODShiLtJ_T0091449.1 MGP_NODShiLtJ_G0034447.1 mouse_genomes_project 9 42525628 42526401 + MGP_NODShiLtJ_P0091449 protein_coding protein_coding MGP_NODShiLtJ_T0094917.1 MGP_NODShiLtJ_G0035286.1 mouse_genomes_project 9 136136835 136138295 - MGP_NODShiLtJ_P0094917 Ccr1l1 protein_coding protein_coding MGP_NODShiLtJ_T0005389.1 MGP_NODShiLtJ_G0004558.1 mouse_genomes_project 9 58256537 58289916 - Gldnos antisense antisense MGP_NODShiLtJ_T0002325.1 MGP_NODShiLtJ_G0002235.1 mouse_genomes_project 9 78117703 78120456 + TEC TEC MGP_NODShiLtJ_T0091393.1 MGP_NODShiLtJ_G0034403.1 mouse_genomes_project 9 40763158 40764094 + MGP_NODShiLtJ_P0091393 Olfr906 protein_coding protein_coding MGP_NODShiLtJ_T0002391.1 MGP_NODShiLtJ_G0002300.1 mouse_genomes_project 9 112205173 112209542 + TEC TEC MGP_NODShiLtJ_T0091072.1 MGP_NODShiLtJ_G0034284.1 mouse_genomes_project 9 22774961 22842845 - MGP_NODShiLtJ_P0091072 Anln protein_coding protein_coding MGP_NODShiLtJ_T0016014.1 MGP_NODShiLtJ_G0014122.1 mouse_genomes_project 9 106080186 106080391 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090798.1 MGP_NODShiLtJ_G0034161.1 mouse_genomes_project 9 13953285 14010543 - MGP_NODShiLtJ_P0090798 Panx1 protein_coding protein_coding MGP_NODShiLtJ_T0090799.1 MGP_NODShiLtJ_G0034161.1 mouse_genomes_project 9 13956946 14010984 - MGP_NODShiLtJ_P0090799 Panx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090800.1 MGP_NODShiLtJ_G0034161.1 mouse_genomes_project 9 13959079 13961669 - Panx1 protein_coding retained_intron MGP_NODShiLtJ_T0091530.1 MGP_NODShiLtJ_G0034486.1 mouse_genomes_project 9 47221961 47228095 + MGP_NODShiLtJ_P0091530 Thy1 protein_coding protein_coding MGP_NODShiLtJ_T0093084.1 MGP_NODShiLtJ_G0034903.1 mouse_genomes_project 9 96450911 96495809 + MGP_NODShiLtJ_P0093084 Nt5e protein_coding protein_coding MGP_NODShiLtJ_T0093085.1 MGP_NODShiLtJ_G0034903.1 mouse_genomes_project 9 96451343 96454929 + Nt5e protein_coding retained_intron MGP_NODShiLtJ_T0093086.1 MGP_NODShiLtJ_G0034903.1 mouse_genomes_project 9 96451358 96491536 + Nt5e protein_coding retained_intron MGP_NODShiLtJ_T0091335.1 MGP_NODShiLtJ_G0034363.1 mouse_genomes_project 9 39343221 39363303 + MGP_NODShiLtJ_P0091335 Hepacam protein_coding protein_coding MGP_NODShiLtJ_T0091964.1 MGP_NODShiLtJ_G0034624.1 mouse_genomes_project 9 58599683 58617756 + MGP_NODShiLtJ_P0091964 Idh3a protein_coding protein_coding MGP_NODShiLtJ_T0010989.1 MGP_NODShiLtJ_G0009122.1 mouse_genomes_project 9 119129126 119129211 + Mir425 miRNA miRNA MGP_NODShiLtJ_T0094243.1 MGP_NODShiLtJ_G0035116.1 mouse_genomes_project 9 119483139 119495836 + MGP_NODShiLtJ_P0094243 Uqcrc1 protein_coding protein_coding MGP_NODShiLtJ_T0094244.1 MGP_NODShiLtJ_G0035116.1 mouse_genomes_project 9 119483220 119491116 + MGP_NODShiLtJ_P0094244 Uqcrc1 protein_coding protein_coding MGP_NODShiLtJ_T0094245.1 MGP_NODShiLtJ_G0035116.1 mouse_genomes_project 9 119483221 119490932 + MGP_NODShiLtJ_P0094245 Uqcrc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094246.1 MGP_NODShiLtJ_G0035116.1 mouse_genomes_project 9 119483398 119490651 + Uqcrc1 protein_coding retained_intron MGP_NODShiLtJ_T0094247.1 MGP_NODShiLtJ_G0035116.1 mouse_genomes_project 9 119488752 119491238 + MGP_NODShiLtJ_P0094247 Uqcrc1 protein_coding protein_coding MGP_NODShiLtJ_T0094248.1 MGP_NODShiLtJ_G0035116.1 mouse_genomes_project 9 119492377 119495832 + Uqcrc1 protein_coding retained_intron MGP_NODShiLtJ_T0094249.1 MGP_NODShiLtJ_G0035116.1 mouse_genomes_project 9 119493629 119495753 + MGP_NODShiLtJ_P0094249 Uqcrc1 protein_coding protein_coding MGP_NODShiLtJ_T0094250.1 MGP_NODShiLtJ_G0035116.1 mouse_genomes_project 9 119494523 119495325 + Uqcrc1 protein_coding retained_intron MGP_NODShiLtJ_T0093619.1 MGP_NODShiLtJ_G0035019.1 mouse_genomes_project 9 116276393 116285205 - Col6a4 protein_coding processed_transcript MGP_NODShiLtJ_T0093620.1 MGP_NODShiLtJ_G0035019.1 mouse_genomes_project 9 116277404 116390107 - MGP_NODShiLtJ_P0093620 Col6a4 protein_coding protein_coding MGP_NODShiLtJ_T0093621.1 MGP_NODShiLtJ_G0035019.1 mouse_genomes_project 9 116361605 116362955 - Col6a4 protein_coding processed_transcript MGP_NODShiLtJ_T0015936.1 MGP_NODShiLtJ_G0014044.1 mouse_genomes_project 9 64458707 64458984 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092246.1 MGP_NODShiLtJ_G0034707.1 mouse_genomes_project 9 64598193 65159583 - MGP_NODShiLtJ_P0092246 Thsd4 protein_coding protein_coding MGP_NODShiLtJ_T0092247.1 MGP_NODShiLtJ_G0034707.1 mouse_genomes_project 9 64598193 65173670 - MGP_NODShiLtJ_P0092247 Thsd4 protein_coding protein_coding MGP_NODShiLtJ_T0092248.1 MGP_NODShiLtJ_G0034707.1 mouse_genomes_project 9 64600983 64779260 - MGP_NODShiLtJ_P0092248 Thsd4 protein_coding protein_coding MGP_NODShiLtJ_T0092249.1 MGP_NODShiLtJ_G0034707.1 mouse_genomes_project 9 64627139 64635680 - Thsd4 protein_coding retained_intron MGP_NODShiLtJ_T0092250.1 MGP_NODShiLtJ_G0034707.1 mouse_genomes_project 9 65082986 65190943 - MGP_NODShiLtJ_P0092250 Thsd4 protein_coding protein_coding MGP_NODShiLtJ_T0092251.1 MGP_NODShiLtJ_G0034707.1 mouse_genomes_project 9 65172509 65173642 - Thsd4 protein_coding processed_transcript MGP_NODShiLtJ_T0005400.1 MGP_NODShiLtJ_G0004564.1 mouse_genomes_project 9 62514321 62515496 + Gm16131 antisense antisense MGP_NODShiLtJ_T0100882.1 MGP_NODShiLtJ_G0039276.1 mouse_genomes_project 9 43725131 43725221 + Snord14e snoRNA snoRNA MGP_NODShiLtJ_T0094761.1 MGP_NODShiLtJ_G0035234.1 mouse_genomes_project 9 132361918 132365612 + MGP_NODShiLtJ_P0094761 Eif1b protein_coding protein_coding MGP_NODShiLtJ_T0093779.1 MGP_NODShiLtJ_G0035050.1 mouse_genomes_project 9 117763199 117773527 + MGP_NODShiLtJ_P0093779 6430571L13Rik protein_coding protein_coding MGP_NODShiLtJ_T0093780.1 MGP_NODShiLtJ_G0035050.1 mouse_genomes_project 9 117771994 117777550 + 6430571L13Rik protein_coding processed_transcript MGP_NODShiLtJ_T0091378.1 MGP_NODShiLtJ_G0034388.1 mouse_genomes_project 9 40277292 40278237 + MGP_NODShiLtJ_P0091378 Olfr890 protein_coding protein_coding MGP_NODShiLtJ_T0091158.1 MGP_NODShiLtJ_G0034313.1 mouse_genomes_project 9 32222372 32243977 + MGP_NODShiLtJ_P0091158 Adamts8 protein_coding protein_coding MGP_NODShiLtJ_T0091159.1 MGP_NODShiLtJ_G0034313.1 mouse_genomes_project 9 32223268 32244959 + MGP_NODShiLtJ_P0091159 Adamts8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093425.1 MGP_NODShiLtJ_G0034984.1 mouse_genomes_project 9 111932718 112388052 - MGP_NODShiLtJ_P0093425 Ephb1 protein_coding protein_coding MGP_NODShiLtJ_T0093426.1 MGP_NODShiLtJ_G0034984.1 mouse_genomes_project 9 111933161 112388052 - MGP_NODShiLtJ_P0093426 Ephb1 protein_coding protein_coding MGP_NODShiLtJ_T0093428.1 MGP_NODShiLtJ_G0034984.1 mouse_genomes_project 9 112061130 112388052 - MGP_NODShiLtJ_P0093428 Ephb1 protein_coding protein_coding MGP_NODShiLtJ_T0002317.1 MGP_NODShiLtJ_G0002227.1 mouse_genomes_project 9 77598803 77600798 - TEC TEC MGP_NODShiLtJ_T0090691.1 MGP_NODShiLtJ_G0034128.1 mouse_genomes_project 9 5523790 5575938 + MGP_NODShiLtJ_P0090691 Mmp20 protein_coding protein_coding MGP_NODShiLtJ_T0091055.1 MGP_NODShiLtJ_G0034275.1 mouse_genomes_project 9 22455827 22468770 - MGP_NODShiLtJ_P0091055 Ecsit protein_coding protein_coding MGP_NODShiLtJ_T0091056.1 MGP_NODShiLtJ_G0034275.1 mouse_genomes_project 9 22455827 22468781 - MGP_NODShiLtJ_P0091056 Ecsit protein_coding protein_coding MGP_NODShiLtJ_T0091057.1 MGP_NODShiLtJ_G0034275.1 mouse_genomes_project 9 22455827 22468745 - MGP_NODShiLtJ_P0091057 Ecsit protein_coding protein_coding MGP_NODShiLtJ_T0091058.1 MGP_NODShiLtJ_G0034275.1 mouse_genomes_project 9 22457096 22468770 - MGP_NODShiLtJ_P0091058 Ecsit protein_coding protein_coding MGP_NODShiLtJ_T0098111.1 MGP_NODShiLtJ_G0036523.1 mouse_genomes_project 9 95246238 95246372 + Gm24649 rRNA rRNA MGP_NODShiLtJ_T0100889.1 MGP_NODShiLtJ_G0039283.1 mouse_genomes_project 9 65072594 65072717 + Gm22099 snoRNA snoRNA MGP_NODShiLtJ_T0005485.1 MGP_NODShiLtJ_G0004623.1 mouse_genomes_project 9 119657145 119662018 - Gm7628 antisense antisense MGP_NODShiLtJ_T0016050.1 MGP_NODShiLtJ_G0014158.1 mouse_genomes_project 9 132175102 132175692 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093012.1 MGP_NODShiLtJ_G0034888.1 mouse_genomes_project 9 93173378 93180279 - MGP_NODShiLtJ_P0093012 Fam46a protein_coding protein_coding MGP_NODShiLtJ_T0093013.1 MGP_NODShiLtJ_G0034888.1 mouse_genomes_project 9 93173378 93180055 - MGP_NODShiLtJ_P0093013 Fam46a protein_coding protein_coding MGP_NODShiLtJ_T0092210.1 MGP_NODShiLtJ_G0034698.1 mouse_genomes_project 9 64069765 64077408 - MGP_NODShiLtJ_P0092210 Tmem202 protein_coding protein_coding MGP_NODShiLtJ_T0094831.1 MGP_NODShiLtJ_G0035253.1 mouse_genomes_project 9 133918084 133920034 - MGP_NODShiLtJ_P0094831 Cyp8b1 protein_coding protein_coding MGP_NODShiLtJ_T0009221.1 MGP_NODShiLtJ_G0007403.1 mouse_genomes_project 9 101895375 101915343 + Gm28054 lincRNA lincRNA MGP_NODShiLtJ_T0093622.1 MGP_NODShiLtJ_G0035020.1 mouse_genomes_project 9 116448168 116453460 - MGP_NODShiLtJ_P0093622 Glyctk protein_coding protein_coding MGP_NODShiLtJ_T0093623.1 MGP_NODShiLtJ_G0035020.1 mouse_genomes_project 9 116448180 116453480 - MGP_NODShiLtJ_P0093623 Glyctk protein_coding protein_coding MGP_NODShiLtJ_T0093624.1 MGP_NODShiLtJ_G0035020.1 mouse_genomes_project 9 116452632 116453459 - MGP_NODShiLtJ_P0093624 Glyctk protein_coding protein_coding MGP_NODShiLtJ_T0093625.1 MGP_NODShiLtJ_G0035020.1 mouse_genomes_project 9 116452931 116453452 - MGP_NODShiLtJ_P0093625 Glyctk protein_coding protein_coding MGP_NODShiLtJ_T0090676.1 MGP_NODShiLtJ_G0034120.1 mouse_genomes_project 9 5108639 5119459 + MGP_NODShiLtJ_P0090676 Mmp13 protein_coding protein_coding MGP_NODShiLtJ_T0090647.1 MGP_NODShiLtJ_G0034110.1 mouse_genomes_project 9 1436752 1460085 + MGP_NODShiLtJ_P0090647 Kbtbd3 protein_coding protein_coding MGP_NODShiLtJ_T0099619.1 MGP_NODShiLtJ_G0038013.1 mouse_genomes_project 9 77792662 77792761 - Gm25045 snRNA snRNA MGP_NODShiLtJ_T0094557.1 MGP_NODShiLtJ_G0035172.1 mouse_genomes_project 9 122532382 122662908 - MGP_NODShiLtJ_P0094557 Stac protein_coding protein_coding MGP_NODShiLtJ_T0094558.1 MGP_NODShiLtJ_G0035172.1 mouse_genomes_project 9 122532382 122662785 - MGP_NODShiLtJ_P0094558 Stac protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094559.1 MGP_NODShiLtJ_G0035172.1 mouse_genomes_project 9 122607097 122662889 - Stac protein_coding processed_transcript MGP_NODShiLtJ_T0018413.1 MGP_NODShiLtJ_G0015622.1 mouse_genomes_project 9 108631989 108638900 - Foxl2os processed_transcript lincRNA MGP_NODShiLtJ_T0018414.1 MGP_NODShiLtJ_G0015622.1 mouse_genomes_project 9 108637390 108637885 - Foxl2os processed_transcript retained_intron MGP_NODShiLtJ_T0018415.1 MGP_NODShiLtJ_G0015622.1 mouse_genomes_project 9 108637472 108638399 - Foxl2os processed_transcript retained_intron MGP_NODShiLtJ_T0091168.1 MGP_NODShiLtJ_G0034317.1 mouse_genomes_project 9 32579768 32688873 + MGP_NODShiLtJ_P0091168 Prdm10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091169.1 MGP_NODShiLtJ_G0034317.1 mouse_genomes_project 9 32579872 32634267 + MGP_NODShiLtJ_P0091169 Prdm10 protein_coding protein_coding MGP_NODShiLtJ_T0091170.1 MGP_NODShiLtJ_G0034317.1 mouse_genomes_project 9 32617517 32634256 + Prdm10 protein_coding retained_intron MGP_NODShiLtJ_T0091171.1 MGP_NODShiLtJ_G0034317.1 mouse_genomes_project 9 32617816 32685680 + MGP_NODShiLtJ_P0091171 Prdm10 protein_coding protein_coding MGP_NODShiLtJ_T0016037.1 MGP_NODShiLtJ_G0014145.1 mouse_genomes_project 9 115793070 115793473 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002407.1 MGP_NODShiLtJ_G0002316.1 mouse_genomes_project 9 118139233 118140432 + TEC TEC MGP_NODShiLtJ_T0011001.1 MGP_NODShiLtJ_G0009134.1 mouse_genomes_project 9 132898852 132898914 + Mir7090 miRNA miRNA MGP_NODShiLtJ_T0009219.1 MGP_NODShiLtJ_G0007402.1 mouse_genomes_project 9 101699035 101731859 + lincRNA lincRNA MGP_NODShiLtJ_T0009220.1 MGP_NODShiLtJ_G0007402.1 mouse_genomes_project 9 101700295 101782649 + lincRNA lincRNA MGP_NODShiLtJ_T0091510.1 MGP_NODShiLtJ_G0034476.1 mouse_genomes_project 9 45478399 45539731 - MGP_NODShiLtJ_P0091510 Tbcel protein_coding protein_coding MGP_NODShiLtJ_T0091511.1 MGP_NODShiLtJ_G0034476.1 mouse_genomes_project 9 45478399 45524262 - MGP_NODShiLtJ_P0091511 Tbcel protein_coding protein_coding MGP_NODShiLtJ_T0091512.1 MGP_NODShiLtJ_G0034476.1 mouse_genomes_project 9 45479501 45528136 - MGP_NODShiLtJ_P0091512 Tbcel protein_coding protein_coding MGP_NODShiLtJ_T0091513.1 MGP_NODShiLtJ_G0034476.1 mouse_genomes_project 9 45480073 45494314 - Tbcel protein_coding processed_transcript MGP_NODShiLtJ_T0091514.1 MGP_NODShiLtJ_G0034476.1 mouse_genomes_project 9 45481758 45539738 - MGP_NODShiLtJ_P0091514 Tbcel protein_coding protein_coding MGP_NODShiLtJ_T0091515.1 MGP_NODShiLtJ_G0034476.1 mouse_genomes_project 9 45481872 45539691 - MGP_NODShiLtJ_P0091515 Tbcel protein_coding protein_coding MGP_NODShiLtJ_T0091516.1 MGP_NODShiLtJ_G0034476.1 mouse_genomes_project 9 45516045 45575256 - MGP_NODShiLtJ_P0091516 Tbcel protein_coding protein_coding MGP_NODShiLtJ_T0005459.1 MGP_NODShiLtJ_G0004604.1 mouse_genomes_project 9 115568629 115574999 + antisense antisense MGP_NODShiLtJ_T0091965.1 MGP_NODShiLtJ_G0034625.1 mouse_genomes_project 9 58617971 58678171 - MGP_NODShiLtJ_P0091965 Acsbg1 protein_coding protein_coding MGP_NODShiLtJ_T0091966.1 MGP_NODShiLtJ_G0034625.1 mouse_genomes_project 9 58642602 58658481 - MGP_NODShiLtJ_P0091966 Acsbg1 protein_coding protein_coding MGP_NODShiLtJ_T0091967.1 MGP_NODShiLtJ_G0034625.1 mouse_genomes_project 9 58642628 58662669 - MGP_NODShiLtJ_P0091967 Acsbg1 protein_coding protein_coding MGP_NODShiLtJ_T0091968.1 MGP_NODShiLtJ_G0034625.1 mouse_genomes_project 9 58642648 58677996 - MGP_NODShiLtJ_P0091968 Acsbg1 protein_coding protein_coding MGP_NODShiLtJ_T0091969.1 MGP_NODShiLtJ_G0034625.1 mouse_genomes_project 9 58661505 58662540 - Acsbg1 protein_coding retained_intron MGP_NODShiLtJ_T0094105.1 MGP_NODShiLtJ_G0035098.1 mouse_genomes_project 9 119004453 119009865 + MGP_NODShiLtJ_P0094105 Ccdc71 protein_coding protein_coding MGP_NODShiLtJ_T0094106.1 MGP_NODShiLtJ_G0035098.1 mouse_genomes_project 9 119004461 119007194 + MGP_NODShiLtJ_P0094106 Ccdc71 protein_coding protein_coding MGP_NODShiLtJ_T0094107.1 MGP_NODShiLtJ_G0035098.1 mouse_genomes_project 9 119005346 119009733 + MGP_NODShiLtJ_P0094107 Ccdc71 protein_coding protein_coding MGP_NODShiLtJ_T0099600.1 MGP_NODShiLtJ_G0037994.1 mouse_genomes_project 9 50015778 50015885 - Gm22805 snRNA snRNA MGP_NODShiLtJ_T0094929.1 MGP_NODShiLtJ_G0035290.1 mouse_genomes_project 9 136507674 136541001 - MGP_NODShiLtJ_P0094929 2010315B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0094930.1 MGP_NODShiLtJ_G0035290.1 mouse_genomes_project 9 136509511 136540947 - MGP_NODShiLtJ_P0094930 2010315B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0094931.1 MGP_NODShiLtJ_G0035290.1 mouse_genomes_project 9 136509701 136540204 - MGP_NODShiLtJ_P0094931 2010315B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0094932.1 MGP_NODShiLtJ_G0035290.1 mouse_genomes_project 9 136509713 136540976 - MGP_NODShiLtJ_P0094932 2010315B03Rik protein_coding protein_coding MGP_NODShiLtJ_T0094933.1 MGP_NODShiLtJ_G0035290.1 mouse_genomes_project 9 136516542 136540976 - 2010315B03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0091601.1 MGP_NODShiLtJ_G0034507.1 mouse_genomes_project 9 47616254 47618961 + MGP_NODShiLtJ_P0091601 Rps25 protein_coding protein_coding MGP_NODShiLtJ_T0009138.1 MGP_NODShiLtJ_G0007337.1 mouse_genomes_project 9 34475625 34550322 + lincRNA lincRNA MGP_NODShiLtJ_T0009192.1 MGP_NODShiLtJ_G0007380.1 mouse_genomes_project 9 80879148 80881623 - Gm28182 lincRNA lincRNA MGP_NODShiLtJ_T0009214.1 MGP_NODShiLtJ_G0007397.1 mouse_genomes_project 9 98432173 98433942 + Gm26882 lincRNA lincRNA MGP_NODShiLtJ_T0094432.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121403704 121499809 + MGP_NODShiLtJ_P0094432 Setd2 protein_coding protein_coding MGP_NODShiLtJ_T0094433.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121419074 121499790 + MGP_NODShiLtJ_P0094433 Setd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094434.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121422400 121434465 + MGP_NODShiLtJ_P0094434 Setd2 protein_coding protein_coding MGP_NODShiLtJ_T0094435.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121432226 121440743 + Setd2 protein_coding retained_intron MGP_NODShiLtJ_T0094436.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121432308 121443536 + Setd2 protein_coding retained_intron MGP_NODShiLtJ_T0094437.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121446426 121499783 + MGP_NODShiLtJ_P0094437 Setd2 protein_coding protein_coding MGP_NODShiLtJ_T0094438.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121446688 121473580 + MGP_NODShiLtJ_P0094438 Setd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094439.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121473444 121484267 + Setd2 protein_coding retained_intron MGP_NODShiLtJ_T0094440.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121481335 121499324 + MGP_NODShiLtJ_P0094440 Setd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094441.1 MGP_NODShiLtJ_G0035147.1 mouse_genomes_project 9 121498776 121499783 + Setd2 protein_coding retained_intron MGP_NODShiLtJ_T0098212.1 MGP_NODShiLtJ_G0036624.1 mouse_genomes_project 9 69264528 69264663 + Gm24289 scaRNA scaRNA MGP_NODShiLtJ_T0090953.1 MGP_NODShiLtJ_G0034233.1 mouse_genomes_project 9 21241826 21247807 + MGP_NODShiLtJ_P0090953 Mrpl4 protein_coding protein_coding MGP_NODShiLtJ_T0005500.1 MGP_NODShiLtJ_G0004635.1 mouse_genomes_project 9 133571528 133588511 + Lyzl4os antisense antisense MGP_NODShiLtJ_T0005501.1 MGP_NODShiLtJ_G0004635.1 mouse_genomes_project 9 133571551 133601318 + Lyzl4os antisense antisense MGP_NODShiLtJ_T0015994.1 MGP_NODShiLtJ_G0014102.1 mouse_genomes_project 9 98572768 98573052 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092437.1 MGP_NODShiLtJ_G0034762.1 mouse_genomes_project 9 70789230 70825318 + Oaz2 protein_coding processed_transcript MGP_NODShiLtJ_T0092438.1 MGP_NODShiLtJ_G0034762.1 mouse_genomes_project 9 70790927 70824261 + Oaz2 protein_coding processed_transcript MGP_NODShiLtJ_T0092439.1 MGP_NODShiLtJ_G0034762.1 mouse_genomes_project 9 70804568 70826737 + MGP_NODShiLtJ_P0092439 Oaz2 protein_coding protein_coding MGP_NODShiLtJ_T0092440.1 MGP_NODShiLtJ_G0034762.1 mouse_genomes_project 9 70804599 70824983 + Oaz2 protein_coding retained_intron MGP_NODShiLtJ_T0092441.1 MGP_NODShiLtJ_G0034762.1 mouse_genomes_project 9 70804606 70826703 + MGP_NODShiLtJ_P0092441 Oaz2 protein_coding protein_coding MGP_NODShiLtJ_T0092442.1 MGP_NODShiLtJ_G0034762.1 mouse_genomes_project 9 70804611 70824974 + MGP_NODShiLtJ_P0092442 Oaz2 protein_coding protein_coding MGP_NODShiLtJ_T0092443.1 MGP_NODShiLtJ_G0034762.1 mouse_genomes_project 9 70824241 70825954 + MGP_NODShiLtJ_P0092443 Oaz2 protein_coding protein_coding MGP_NODShiLtJ_T0090734.1 MGP_NODShiLtJ_G0034142.1 mouse_genomes_project 9 12175673 12177726 - MGP_NODShiLtJ_P0090734 Jrkl protein_coding protein_coding MGP_NODShiLtJ_T0094446.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121505965 121535346 - MGP_NODShiLtJ_P0094446 Nbeal2 protein_coding protein_coding MGP_NODShiLtJ_T0094447.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121505965 121535346 - MGP_NODShiLtJ_P0094447 Nbeal2 protein_coding protein_coding MGP_NODShiLtJ_T0094448.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121506048 121535327 - MGP_NODShiLtJ_P0094448 Nbeal2 protein_coding protein_coding MGP_NODShiLtJ_T0094449.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121506219 121519800 - MGP_NODShiLtJ_P0094449 Nbeal2 protein_coding protein_coding MGP_NODShiLtJ_T0094450.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121506219 121513228 - MGP_NODShiLtJ_P0094450 Nbeal2 protein_coding protein_coding MGP_NODShiLtJ_T0094451.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121509412 121510055 - Nbeal2 protein_coding retained_intron MGP_NODShiLtJ_T0094452.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121510084 121510845 - Nbeal2 protein_coding retained_intron MGP_NODShiLtJ_T0094453.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121510746 121515626 - MGP_NODShiLtJ_P0094453 Nbeal2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094454.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121512242 121513057 - Nbeal2 protein_coding retained_intron MGP_NODShiLtJ_T0094455.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121515802 121516270 - Nbeal2 protein_coding retained_intron MGP_NODShiLtJ_T0094456.1 MGP_NODShiLtJ_G0035149.1 mouse_genomes_project 9 121519500 121526555 - MGP_NODShiLtJ_P0094456 Nbeal2 protein_coding protein_coding MGP_NODShiLtJ_T0091249.1 MGP_NODShiLtJ_G0034334.1 mouse_genomes_project 9 37064434 37099902 + MGP_NODShiLtJ_P0091249 Cdon protein_coding protein_coding MGP_NODShiLtJ_T0091250.1 MGP_NODShiLtJ_G0034334.1 mouse_genomes_project 9 37064860 37099877 + MGP_NODShiLtJ_P0091250 Cdon protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091251.1 MGP_NODShiLtJ_G0034334.1 mouse_genomes_project 9 37064903 37156576 + MGP_NODShiLtJ_P0091251 Cdon protein_coding protein_coding MGP_NODShiLtJ_T0091252.1 MGP_NODShiLtJ_G0034334.1 mouse_genomes_project 9 37066900 37118363 + MGP_NODShiLtJ_P0091252 Cdon protein_coding protein_coding MGP_NODShiLtJ_T0091253.1 MGP_NODShiLtJ_G0034334.1 mouse_genomes_project 9 37096612 37156575 + MGP_NODShiLtJ_P0091253 Cdon protein_coding protein_coding MGP_NODShiLtJ_T0091254.1 MGP_NODShiLtJ_G0034334.1 mouse_genomes_project 9 37102004 37117292 + MGP_NODShiLtJ_P0091254 Cdon protein_coding protein_coding MGP_NODShiLtJ_T0091353.1 MGP_NODShiLtJ_G0034369.1 mouse_genomes_project 9 39540053 39549196 - MGP_NODShiLtJ_P0091353 Nrgn protein_coding protein_coding MGP_NODShiLtJ_T0091354.1 MGP_NODShiLtJ_G0034369.1 mouse_genomes_project 9 39540515 39541700 - Nrgn protein_coding processed_transcript MGP_NODShiLtJ_T0091071.1 MGP_NODShiLtJ_G0034283.1 mouse_genomes_project 9 22715324 22747973 - MGP_NODShiLtJ_P0091071 Zfp810 protein_coding protein_coding MGP_NODShiLtJ_T0005414.1 MGP_NODShiLtJ_G0004574.1 mouse_genomes_project 9 78177730 78178420 - Gm27231 antisense antisense MGP_NODShiLtJ_T0094805.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133722942 133747128 + MGP_NODShiLtJ_P0094805 Nktr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094806.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133722949 133761253 + MGP_NODShiLtJ_P0094806 Nktr protein_coding protein_coding MGP_NODShiLtJ_T0094807.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133722951 133747046 + MGP_NODShiLtJ_P0094807 Nktr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094808.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133722990 133734412 + Nktr protein_coding retained_intron MGP_NODShiLtJ_T0094809.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133723016 133739850 + Nktr protein_coding retained_intron MGP_NODShiLtJ_T0094810.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133723240 133735914 + MGP_NODShiLtJ_P0094810 Nktr protein_coding protein_coding MGP_NODShiLtJ_T0094811.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133731714 133754250 + MGP_NODShiLtJ_P0094811 Nktr protein_coding protein_coding MGP_NODShiLtJ_T0094812.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133731714 133752603 + MGP_NODShiLtJ_P0094812 Nktr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094813.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133733796 133735982 + Nktr protein_coding retained_intron MGP_NODShiLtJ_T0094814.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133735545 133747082 + Nktr protein_coding retained_intron MGP_NODShiLtJ_T0094815.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133755195 133758806 + MGP_NODShiLtJ_P0094815 Nktr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094816.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133755624 133757057 + Nktr protein_coding retained_intron MGP_NODShiLtJ_T0094817.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133756076 133759267 + MGP_NODShiLtJ_P0094817 Nktr protein_coding protein_coding MGP_NODShiLtJ_T0094818.1 MGP_NODShiLtJ_G0035246.1 mouse_genomes_project 9 133756936 133758766 + Nktr protein_coding retained_intron MGP_NODShiLtJ_T0091900.1 MGP_NODShiLtJ_G0034597.1 mouse_genomes_project 9 54995865 55004167 - MGP_NODShiLtJ_P0091900 Gm684 protein_coding protein_coding MGP_NODShiLtJ_T0094918.1 MGP_NODShiLtJ_G0035287.1 mouse_genomes_project 9 136190020 136218952 + MGP_NODShiLtJ_P0094918 Ccr3 protein_coding protein_coding MGP_NODShiLtJ_T0009128.1 MGP_NODShiLtJ_G0007327.1 mouse_genomes_project 9 21277923 21281416 - Gm26592 lincRNA lincRNA MGP_NODShiLtJ_T0002365.1 MGP_NODShiLtJ_G0002274.1 mouse_genomes_project 9 100024794 100025678 - TEC TEC MGP_NODShiLtJ_T0005495.1 MGP_NODShiLtJ_G0004633.1 mouse_genomes_project 9 130626009 130669184 - Gm2415 antisense antisense MGP_NODShiLtJ_T0005496.1 MGP_NODShiLtJ_G0004633.1 mouse_genomes_project 9 130626092 130669194 - Gm2415 antisense antisense MGP_NODShiLtJ_T0005497.1 MGP_NODShiLtJ_G0004633.1 mouse_genomes_project 9 130643135 130669183 - Gm2415 antisense antisense MGP_NODShiLtJ_T0005498.1 MGP_NODShiLtJ_G0004633.1 mouse_genomes_project 9 130665538 130669380 - Gm2415 antisense antisense MGP_NODShiLtJ_T0093104.1 MGP_NODShiLtJ_G0034907.1 mouse_genomes_project 9 96702359 96732549 + MGP_NODShiLtJ_P0093104 Zfp949 protein_coding protein_coding MGP_NODShiLtJ_T0093105.1 MGP_NODShiLtJ_G0034907.1 mouse_genomes_project 9 96702383 96728966 + MGP_NODShiLtJ_P0093105 Zfp949 protein_coding protein_coding MGP_NODShiLtJ_T0093106.1 MGP_NODShiLtJ_G0034907.1 mouse_genomes_project 9 96702424 96729864 + Zfp949 protein_coding retained_intron MGP_NODShiLtJ_T0093107.1 MGP_NODShiLtJ_G0034907.1 mouse_genomes_project 9 96702439 96708879 + MGP_NODShiLtJ_P0093107 Zfp949 protein_coding protein_coding MGP_NODShiLtJ_T0093108.1 MGP_NODShiLtJ_G0034907.1 mouse_genomes_project 9 96702522 96732549 + MGP_NODShiLtJ_P0093108 Zfp949 protein_coding protein_coding MGP_NODShiLtJ_T0011642.1 MGP_NODShiLtJ_G0009775.1 mouse_genomes_project 9 133186872 133187118 + Gm22987 misc_RNA misc_RNA MGP_NODShiLtJ_T0092370.1 MGP_NODShiLtJ_G0034738.1 mouse_genomes_project 9 69277140 69311881 - MGP_NODShiLtJ_P0092370 Dis3l protein_coding protein_coding MGP_NODShiLtJ_T0092371.1 MGP_NODShiLtJ_G0034738.1 mouse_genomes_project 9 69277140 69311185 - MGP_NODShiLtJ_P0092371 Dis3l protein_coding protein_coding MGP_NODShiLtJ_T0092372.1 MGP_NODShiLtJ_G0034738.1 mouse_genomes_project 9 69277172 69311958 - MGP_NODShiLtJ_P0092372 Dis3l protein_coding protein_coding MGP_NODShiLtJ_T0092373.1 MGP_NODShiLtJ_G0034738.1 mouse_genomes_project 9 69294740 69311884 - Dis3l protein_coding retained_intron MGP_NODShiLtJ_T0092374.1 MGP_NODShiLtJ_G0034738.1 mouse_genomes_project 9 69300251 69307325 - MGP_NODShiLtJ_P0092374 Dis3l protein_coding protein_coding MGP_NODShiLtJ_T0092375.1 MGP_NODShiLtJ_G0034738.1 mouse_genomes_project 9 69307360 69311491 - Dis3l protein_coding processed_transcript MGP_NODShiLtJ_T0092376.1 MGP_NODShiLtJ_G0034738.1 mouse_genomes_project 9 69310184 69311978 - Dis3l protein_coding retained_intron MGP_NODShiLtJ_T0092826.1 MGP_NODShiLtJ_G0034847.1 mouse_genomes_project 9 83358214 83470830 - MGP_NODShiLtJ_P0092826 Tinag protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092827.1 MGP_NODShiLtJ_G0034847.1 mouse_genomes_project 9 83358214 83470875 - MGP_NODShiLtJ_P0092827 Tinag protein_coding protein_coding MGP_NODShiLtJ_T0092828.1 MGP_NODShiLtJ_G0034847.1 mouse_genomes_project 9 83358418 83470781 - MGP_NODShiLtJ_P0092828 Tinag protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093928.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118240000 118349200 - MGP_NODShiLtJ_P0093928 Rbm6 protein_coding protein_coding MGP_NODShiLtJ_T0093929.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118240004 118349192 - MGP_NODShiLtJ_P0093929 Rbm6 protein_coding protein_coding MGP_NODShiLtJ_T0093930.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118240008 118349134 - MGP_NODShiLtJ_P0093930 Rbm6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093931.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118246145 118248571 - Rbm6 protein_coding retained_intron MGP_NODShiLtJ_T0093932.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118257676 118261433 - Rbm6 protein_coding retained_intron MGP_NODShiLtJ_T0093933.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118257909 118263395 - MGP_NODShiLtJ_P0093933 Rbm6 protein_coding protein_coding MGP_NODShiLtJ_T0093934.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118263403 118349104 - MGP_NODShiLtJ_P0093934 Rbm6 protein_coding protein_coding MGP_NODShiLtJ_T0093935.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118272465 118349106 - Rbm6 protein_coding processed_transcript MGP_NODShiLtJ_T0093936.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118283825 118319503 - Rbm6 protein_coding processed_transcript MGP_NODShiLtJ_T0093937.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118303815 118349115 - Rbm6 protein_coding retained_intron MGP_NODShiLtJ_T0093938.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118319388 118324376 - Rbm6 protein_coding retained_intron MGP_NODShiLtJ_T0093939.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118328876 118349146 - MGP_NODShiLtJ_P0093939 Rbm6 protein_coding protein_coding MGP_NODShiLtJ_T0093940.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118328927 118348792 - MGP_NODShiLtJ_P0093940 Rbm6 protein_coding protein_coding MGP_NODShiLtJ_T0093941.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118328965 118349142 - Rbm6 protein_coding processed_transcript MGP_NODShiLtJ_T0093942.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118333855 118349093 - Rbm6 protein_coding retained_intron MGP_NODShiLtJ_T0093943.1 MGP_NODShiLtJ_G0035069.1 mouse_genomes_project 9 118345210 118349608 - Rbm6 protein_coding retained_intron MGP_NODShiLtJ_T0093704.1 MGP_NODShiLtJ_G0035034.1 mouse_genomes_project 9 116798788 116805309 + Rrp9 protein_coding processed_transcript MGP_NODShiLtJ_T0093705.1 MGP_NODShiLtJ_G0035034.1 mouse_genomes_project 9 116800094 116808859 + MGP_NODShiLtJ_P0093705 Rrp9 protein_coding protein_coding MGP_NODShiLtJ_T0093706.1 MGP_NODShiLtJ_G0035034.1 mouse_genomes_project 9 116800143 116808851 + Rrp9 protein_coding retained_intron MGP_NODShiLtJ_T0093707.1 MGP_NODShiLtJ_G0035034.1 mouse_genomes_project 9 116800155 116800816 + Rrp9 protein_coding retained_intron MGP_NODShiLtJ_T0093708.1 MGP_NODShiLtJ_G0035034.1 mouse_genomes_project 9 116807288 116808857 + MGP_NODShiLtJ_P0093708 Rrp9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093709.1 MGP_NODShiLtJ_G0035034.1 mouse_genomes_project 9 116807898 116808859 + Rrp9 protein_coding retained_intron MGP_NODShiLtJ_T0090809.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14300204 14316680 - MGP_NODShiLtJ_P0090809 Cep295 protein_coding protein_coding MGP_NODShiLtJ_T0090810.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14300204 14343997 - MGP_NODShiLtJ_P0090810 Cep295 protein_coding protein_coding MGP_NODShiLtJ_T0090811.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14300206 14316787 - Cep295 protein_coding retained_intron MGP_NODShiLtJ_T0090812.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14300209 14324381 - Cep295 protein_coding retained_intron MGP_NODShiLtJ_T0090813.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14300290 14343952 - MGP_NODShiLtJ_P0090813 Cep295 protein_coding protein_coding MGP_NODShiLtJ_T0090814.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14300386 14337937 - MGP_NODShiLtJ_P0090814 Cep295 protein_coding protein_coding MGP_NODShiLtJ_T0090815.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14300562 14301247 - Cep295 protein_coding retained_intron MGP_NODShiLtJ_T0090816.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14306288 14309469 - MGP_NODShiLtJ_P0090816 Cep295 protein_coding protein_coding MGP_NODShiLtJ_T0090817.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14308831 14315266 - MGP_NODShiLtJ_P0090817 Cep295 protein_coding protein_coding MGP_NODShiLtJ_T0090818.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14308894 14310364 - Cep295 protein_coding retained_intron MGP_NODShiLtJ_T0090819.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14326682 14334131 - Cep295 protein_coding processed_transcript MGP_NODShiLtJ_T0090820.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14327871 14334661 - Cep295 protein_coding retained_intron MGP_NODShiLtJ_T0090821.1 MGP_NODShiLtJ_G0034167.1 mouse_genomes_project 9 14329779 14335042 - Cep295 protein_coding retained_intron MGP_NODShiLtJ_T0092759.1 MGP_NODShiLtJ_G0034827.1 mouse_genomes_project 9 80088167 80126833 + Wdr72 protein_coding processed_transcript MGP_NODShiLtJ_T0092760.1 MGP_NODShiLtJ_G0034827.1 mouse_genomes_project 9 80088167 80278633 + MGP_NODShiLtJ_P0092760 Wdr72 protein_coding protein_coding MGP_NODShiLtJ_T0092761.1 MGP_NODShiLtJ_G0034827.1 mouse_genomes_project 9 80088215 80091498 + Wdr72 protein_coding processed_transcript MGP_NODShiLtJ_T0092762.1 MGP_NODShiLtJ_G0034827.1 mouse_genomes_project 9 80114040 80277153 + MGP_NODShiLtJ_P0092762 Wdr72 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092763.1 MGP_NODShiLtJ_G0034827.1 mouse_genomes_project 9 80269673 80278738 + Wdr72 protein_coding processed_transcript MGP_NODShiLtJ_T0091302.1 MGP_NODShiLtJ_G0034357.1 mouse_genomes_project 9 38718291 38736587 - MGP_NODShiLtJ_P0091302 Ei24 protein_coding protein_coding MGP_NODShiLtJ_T0091303.1 MGP_NODShiLtJ_G0034357.1 mouse_genomes_project 9 38718291 38736504 - MGP_NODShiLtJ_P0091303 Ei24 protein_coding protein_coding MGP_NODShiLtJ_T0091304.1 MGP_NODShiLtJ_G0034357.1 mouse_genomes_project 9 38719010 38722378 - Ei24 protein_coding retained_intron MGP_NODShiLtJ_T0091305.1 MGP_NODShiLtJ_G0034357.1 mouse_genomes_project 9 38719309 38721883 - Ei24 protein_coding retained_intron MGP_NODShiLtJ_T0091306.1 MGP_NODShiLtJ_G0034357.1 mouse_genomes_project 9 38721946 38725198 - Ei24 protein_coding retained_intron MGP_NODShiLtJ_T0091307.1 MGP_NODShiLtJ_G0034357.1 mouse_genomes_project 9 38724789 38736251 - MGP_NODShiLtJ_P0091307 Ei24 protein_coding protein_coding MGP_NODShiLtJ_T0091308.1 MGP_NODShiLtJ_G0034357.1 mouse_genomes_project 9 38724798 38729501 - MGP_NODShiLtJ_P0091308 Ei24 protein_coding protein_coding MGP_NODShiLtJ_T0091309.1 MGP_NODShiLtJ_G0034357.1 mouse_genomes_project 9 38725707 38736592 - MGP_NODShiLtJ_P0091309 Ei24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090873.1 MGP_NODShiLtJ_G0034201.1 mouse_genomes_project 9 19621341 19622333 + MGP_NODShiLtJ_P0090873 Olfr855 protein_coding protein_coding MGP_NODShiLtJ_T0093713.1 MGP_NODShiLtJ_G0035037.1 mouse_genomes_project 9 116831205 116832645 + MGP_NODShiLtJ_P0093713 Iqcf5 protein_coding protein_coding MGP_NODShiLtJ_T0094795.1 MGP_NODShiLtJ_G0035243.1 mouse_genomes_project 9 133633289 133664530 + MGP_NODShiLtJ_P0094795 Vipr1 protein_coding protein_coding MGP_NODShiLtJ_T0094796.1 MGP_NODShiLtJ_G0035243.1 mouse_genomes_project 9 133633624 133651882 + Vipr1 protein_coding processed_transcript MGP_NODShiLtJ_T0094797.1 MGP_NODShiLtJ_G0035243.1 mouse_genomes_project 9 133656190 133657483 + Vipr1 protein_coding retained_intron MGP_NODShiLtJ_T0094798.1 MGP_NODShiLtJ_G0035243.1 mouse_genomes_project 9 133660288 133661085 + Vipr1 protein_coding retained_intron MGP_NODShiLtJ_T0091067.1 MGP_NODShiLtJ_G0034280.1 mouse_genomes_project 9 22582138 22600003 + MGP_NODShiLtJ_P0091067 Zfp872 protein_coding protein_coding MGP_NODShiLtJ_T0091068.1 MGP_NODShiLtJ_G0034280.1 mouse_genomes_project 9 22591369 22595146 + MGP_NODShiLtJ_P0091068 Zfp872 protein_coding protein_coding MGP_NODShiLtJ_T0094701.1 MGP_NODShiLtJ_G0035210.1 mouse_genomes_project 9 130902033 130910324 - MGP_NODShiLtJ_P0094701 Acaa1b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091045.1 MGP_NODShiLtJ_G0034269.1 mouse_genomes_project 9 22333028 22337698 - MGP_NODShiLtJ_P0091045 Epor protein_coding protein_coding MGP_NODShiLtJ_T0092751.1 MGP_NODShiLtJ_G0034824.1 mouse_genomes_project 9 78941670 78958546 + MGP_NODShiLtJ_P0092751 Gm20509 protein_coding protein_coding MGP_NODShiLtJ_T0005384.1 MGP_NODShiLtJ_G0004556.1 mouse_genomes_project 9 55622832 55665873 - Arhgap20os antisense antisense MGP_NODShiLtJ_T0005385.1 MGP_NODShiLtJ_G0004556.1 mouse_genomes_project 9 55629524 55665754 - Arhgap20os antisense antisense MGP_NODShiLtJ_T0005386.1 MGP_NODShiLtJ_G0004556.1 mouse_genomes_project 9 55629532 55665872 - Arhgap20os antisense antisense MGP_NODShiLtJ_T0005387.1 MGP_NODShiLtJ_G0004556.1 mouse_genomes_project 9 55630389 55665739 - Arhgap20os antisense antisense MGP_NODShiLtJ_T0092218.1 MGP_NODShiLtJ_G0034701.1 mouse_genomes_project 9 64181343 64219216 + MGP_NODShiLtJ_P0092218 Parp6 protein_coding protein_coding MGP_NODShiLtJ_T0015915.1 MGP_NODShiLtJ_G0014023.1 mouse_genomes_project 9 35402430 35402881 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091780.1 MGP_NODShiLtJ_G0034560.1 mouse_genomes_project 9 52045351 52051963 - MGP_NODShiLtJ_P0091780 Rbm7 protein_coding protein_coding MGP_NODShiLtJ_T0091310.1 MGP_NODShiLtJ_G0034358.1 mouse_genomes_project 9 38761665 38791951 + MGP_NODShiLtJ_P0091310 Fez1 protein_coding protein_coding MGP_NODShiLtJ_T0091311.1 MGP_NODShiLtJ_G0034358.1 mouse_genomes_project 9 38772373 38822216 + MGP_NODShiLtJ_P0091311 Fez1 protein_coding protein_coding MGP_NODShiLtJ_T0091312.1 MGP_NODShiLtJ_G0034358.1 mouse_genomes_project 9 38774155 38803823 + MGP_NODShiLtJ_P0091312 Fez1 protein_coding protein_coding MGP_NODShiLtJ_T0091313.1 MGP_NODShiLtJ_G0034358.1 mouse_genomes_project 9 38785160 38821932 + MGP_NODShiLtJ_P0091313 Fez1 protein_coding protein_coding MGP_NODShiLtJ_T0091314.1 MGP_NODShiLtJ_G0034358.1 mouse_genomes_project 9 38785279 38809553 + MGP_NODShiLtJ_P0091314 Fez1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091315.1 MGP_NODShiLtJ_G0034358.1 mouse_genomes_project 9 38810650 38813994 + MGP_NODShiLtJ_P0091315 Fez1 protein_coding protein_coding MGP_NODShiLtJ_T0091316.1 MGP_NODShiLtJ_G0034358.1 mouse_genomes_project 9 38811875 38822092 + Fez1 protein_coding retained_intron MGP_NODShiLtJ_T0091317.1 MGP_NODShiLtJ_G0034358.1 mouse_genomes_project 9 38812275 38822212 + MGP_NODShiLtJ_P0091317 Fez1 protein_coding protein_coding MGP_NODShiLtJ_T0091816.1 MGP_NODShiLtJ_G0034578.1 mouse_genomes_project 9 54260160 54267369 + MGP_NODShiLtJ_P0091816 Il18 protein_coding protein_coding MGP_NODShiLtJ_T0091817.1 MGP_NODShiLtJ_G0034578.1 mouse_genomes_project 9 54260160 54267369 + MGP_NODShiLtJ_P0091817 Il18 protein_coding protein_coding MGP_NODShiLtJ_T0091318.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38838220 39038340 - MGP_NODShiLtJ_P0091318 Pknox2 protein_coding protein_coding MGP_NODShiLtJ_T0091319.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38838220 39106027 - MGP_NODShiLtJ_P0091319 Pknox2 protein_coding protein_coding MGP_NODShiLtJ_T0091320.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38838223 39106052 - MGP_NODShiLtJ_P0091320 Pknox2 protein_coding protein_coding MGP_NODShiLtJ_T0091321.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38839716 38917881 - MGP_NODShiLtJ_P0091321 Pknox2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091322.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38839880 39038310 - Pknox2 protein_coding processed_transcript MGP_NODShiLtJ_T0091323.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38869670 39038310 - Pknox2 protein_coding retained_intron MGP_NODShiLtJ_T0091324.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38881933 39038310 - Pknox2 protein_coding retained_intron MGP_NODShiLtJ_T0091325.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38883705 39038310 - MGP_NODShiLtJ_P0091325 Pknox2 protein_coding protein_coding MGP_NODShiLtJ_T0091326.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38883718 39094477 - MGP_NODShiLtJ_P0091326 Pknox2 protein_coding protein_coding MGP_NODShiLtJ_T0091327.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38883734 39106060 - MGP_NODShiLtJ_P0091327 Pknox2 protein_coding protein_coding MGP_NODShiLtJ_T0091328.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38902045 39103304 - MGP_NODShiLtJ_P0091328 Pknox2 protein_coding protein_coding MGP_NODShiLtJ_T0091329.1 MGP_NODShiLtJ_G0034359.1 mouse_genomes_project 9 38938682 39106004 - Pknox2 protein_coding processed_transcript MGP_NODShiLtJ_T0009226.1 MGP_NODShiLtJ_G0007405.1 mouse_genomes_project 9 103958024 103959635 - Gm29395 lincRNA lincRNA MGP_NODShiLtJ_T0093352.1 MGP_NODShiLtJ_G0034970.1 mouse_genomes_project 9 109106745 109164669 - MGP_NODShiLtJ_P0093352 Mras protein_coding protein_coding MGP_NODShiLtJ_T0093353.1 MGP_NODShiLtJ_G0034970.1 mouse_genomes_project 9 109109252 109164169 - MGP_NODShiLtJ_P0093353 Mras protein_coding protein_coding MGP_NODShiLtJ_T0093354.1 MGP_NODShiLtJ_G0034970.1 mouse_genomes_project 9 109109303 109151340 - MGP_NODShiLtJ_P0093354 Mras protein_coding protein_coding MGP_NODShiLtJ_T0093355.1 MGP_NODShiLtJ_G0034970.1 mouse_genomes_project 9 109111057 109116020 - Mras protein_coding retained_intron MGP_NODShiLtJ_T0093356.1 MGP_NODShiLtJ_G0034970.1 mouse_genomes_project 9 109114164 109126153 - Mras protein_coding retained_intron MGP_NODShiLtJ_T0093357.1 MGP_NODShiLtJ_G0034970.1 mouse_genomes_project 9 109114325 109145597 - MGP_NODShiLtJ_P0093357 Mras protein_coding protein_coding MGP_NODShiLtJ_T0005399.1 MGP_NODShiLtJ_G0004563.1 mouse_genomes_project 9 62427042 62443604 + Gm16130 antisense antisense MGP_NODShiLtJ_T0091334.1 MGP_NODShiLtJ_G0034362.1 mouse_genomes_project 9 39242120 39324296 - MGP_NODShiLtJ_P0091334 Ccdc15 protein_coding protein_coding MGP_NODShiLtJ_T0015937.1 MGP_NODShiLtJ_G0014045.1 mouse_genomes_project 9 68323844 68324754 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099584.1 MGP_NODShiLtJ_G0037978.1 mouse_genomes_project 9 12213717 12213824 + Gm26189 snRNA snRNA MGP_NODShiLtJ_T0091122.1 MGP_NODShiLtJ_G0034302.1 mouse_genomes_project 9 27933492 27955186 - Acad8 protein_coding retained_intron MGP_NODShiLtJ_T0091123.1 MGP_NODShiLtJ_G0034302.1 mouse_genomes_project 9 27933492 27964596 - MGP_NODShiLtJ_P0091123 Acad8 protein_coding protein_coding MGP_NODShiLtJ_T0091124.1 MGP_NODShiLtJ_G0034302.1 mouse_genomes_project 9 27933501 27964580 - MGP_NODShiLtJ_P0091124 Acad8 protein_coding protein_coding MGP_NODShiLtJ_T0091125.1 MGP_NODShiLtJ_G0034302.1 mouse_genomes_project 9 27934732 27937315 - Acad8 protein_coding retained_intron MGP_NODShiLtJ_T0091126.1 MGP_NODShiLtJ_G0034302.1 mouse_genomes_project 9 27938558 27964539 - MGP_NODShiLtJ_P0091126 Acad8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091127.1 MGP_NODShiLtJ_G0034302.1 mouse_genomes_project 9 27938619 27964537 - MGP_NODShiLtJ_P0091127 Acad8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091128.1 MGP_NODShiLtJ_G0034302.1 mouse_genomes_project 9 27955155 27964536 - Acad8 protein_coding retained_intron MGP_NODShiLtJ_T0090985.1 MGP_NODShiLtJ_G0034249.1 mouse_genomes_project 9 21595269 21632877 + MGP_NODShiLtJ_P0090985 Slc44a2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090986.1 MGP_NODShiLtJ_G0034249.1 mouse_genomes_project 9 21615659 21632870 + MGP_NODShiLtJ_P0090986 Slc44a2 protein_coding protein_coding MGP_NODShiLtJ_T0092049.1 MGP_NODShiLtJ_G0034650.1 mouse_genomes_project 9 61065643 61068950 - MGP_NODShiLtJ_P0092049 Odf3l1 protein_coding protein_coding MGP_NODShiLtJ_T0010932.1 MGP_NODShiLtJ_G0009065.1 mouse_genomes_project 9 14296394 14296453 + Mir7650 miRNA miRNA MGP_NODShiLtJ_T0009272.1 MGP_NODShiLtJ_G0007441.1 mouse_genomes_project 9 131707181 131709342 - Gm2449 lincRNA lincRNA MGP_NODShiLtJ_T0092614.1 MGP_NODShiLtJ_G0034802.1 mouse_genomes_project 9 76382425 76523201 - MGP_NODShiLtJ_P0092614 Lipc protein_coding protein_coding MGP_NODShiLtJ_T0092615.1 MGP_NODShiLtJ_G0034802.1 mouse_genomes_project 9 76382563 76523308 - MGP_NODShiLtJ_P0092615 Lipc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0002299.1 MGP_NODShiLtJ_G0002209.1 mouse_genomes_project 9 25394316 25396165 - TEC TEC MGP_NODShiLtJ_T0093551.1 MGP_NODShiLtJ_G0035009.1 mouse_genomes_project 9 114704492 115072763 + MGP_NODShiLtJ_P0093551 Cpne4 protein_coding protein_coding MGP_NODShiLtJ_T0093552.1 MGP_NODShiLtJ_G0035009.1 mouse_genomes_project 9 114723157 115072515 + MGP_NODShiLtJ_P0093552 Cpne4 protein_coding protein_coding MGP_NODShiLtJ_T0093553.1 MGP_NODShiLtJ_G0035009.1 mouse_genomes_project 9 114725932 115247803 + MGP_NODShiLtJ_P0093553 Cpne4 protein_coding protein_coding MGP_NODShiLtJ_T0093554.1 MGP_NODShiLtJ_G0035009.1 mouse_genomes_project 9 114726236 115247803 + MGP_NODShiLtJ_P0093554 Cpne4 protein_coding protein_coding MGP_NODShiLtJ_T0094915.1 MGP_NODShiLtJ_G0035284.1 mouse_genomes_project 9 135988384 135999850 - MGP_NODShiLtJ_P0094915 Xcr1 protein_coding protein_coding MGP_NODShiLtJ_T0015910.1 MGP_NODShiLtJ_G0014018.1 mouse_genomes_project 9 25859756 25859834 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091046.1 MGP_NODShiLtJ_G0034270.1 mouse_genomes_project 9 22345652 22368021 - MGP_NODShiLtJ_P0091046 Rgl3 protein_coding protein_coding MGP_NODShiLtJ_T0009178.1 MGP_NODShiLtJ_G0007369.1 mouse_genomes_project 9 73087297 73088794 - M5C1000I18Rik lincRNA lincRNA MGP_NODShiLtJ_T0009179.1 MGP_NODShiLtJ_G0007369.1 mouse_genomes_project 9 73087298 73088794 - M5C1000I18Rik lincRNA lincRNA MGP_NODShiLtJ_T0009180.1 MGP_NODShiLtJ_G0007369.1 mouse_genomes_project 9 73087298 73088816 - M5C1000I18Rik lincRNA lincRNA MGP_NODShiLtJ_T0091425.1 MGP_NODShiLtJ_G0034429.1 mouse_genomes_project 9 41746360 41747296 + MGP_NODShiLtJ_P0091425 Olfr944 protein_coding protein_coding MGP_NODShiLtJ_T0016040.1 MGP_NODShiLtJ_G0014148.1 mouse_genomes_project 9 117592318 117593587 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092324.1 MGP_NODShiLtJ_G0034727.1 mouse_genomes_project 9 68265614 68270519 - 2300009A05Rik protein_coding processed_transcript MGP_NODShiLtJ_T0092325.1 MGP_NODShiLtJ_G0034727.1 mouse_genomes_project 9 68265614 68270933 - MGP_NODShiLtJ_P0092325 2300009A05Rik protein_coding protein_coding MGP_NODShiLtJ_T0092326.1 MGP_NODShiLtJ_G0034727.1 mouse_genomes_project 9 68265615 68270519 - 2300009A05Rik protein_coding processed_transcript MGP_NODShiLtJ_T0092327.1 MGP_NODShiLtJ_G0034727.1 mouse_genomes_project 9 68269168 68270938 - 2300009A05Rik protein_coding retained_intron MGP_NODShiLtJ_T0100878.1 MGP_NODShiLtJ_G0039272.1 mouse_genomes_project 9 40786684 40786808 + Gm23271 snoRNA snoRNA MGP_NODShiLtJ_T0093071.1 MGP_NODShiLtJ_G0034899.1 mouse_genomes_project 9 95057343 95121250 + MGP_NODShiLtJ_P0093071 Cyb5r4 protein_coding protein_coding MGP_NODShiLtJ_T0093072.1 MGP_NODShiLtJ_G0034899.1 mouse_genomes_project 9 95057416 95113808 + Cyb5r4 protein_coding processed_transcript MGP_NODShiLtJ_T0093073.1 MGP_NODShiLtJ_G0034899.1 mouse_genomes_project 9 95064720 95086111 + Cyb5r4 protein_coding retained_intron MGP_NODShiLtJ_T0093074.1 MGP_NODShiLtJ_G0034899.1 mouse_genomes_project 9 95104684 95120856 + MGP_NODShiLtJ_P0093074 Cyb5r4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100894.1 MGP_NODShiLtJ_G0039288.1 mouse_genomes_project 9 69118577 69118648 + Gm22455 snoRNA snoRNA MGP_NODShiLtJ_T0009181.1 MGP_NODShiLtJ_G0007370.1 mouse_genomes_project 9 73616278 73616650 + Gm28195 lincRNA lincRNA MGP_NODShiLtJ_T0092052.1 MGP_NODShiLtJ_G0034653.1 mouse_genomes_project 9 61158043 61158967 + MGP_NODShiLtJ_P0092052 Imp3 protein_coding protein_coding MGP_NODShiLtJ_T0092177.1 MGP_NODShiLtJ_G0034689.1 mouse_genomes_project 9 62923958 62935076 + MGP_NODShiLtJ_P0092177 6030419C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0092472.1 MGP_NODShiLtJ_G0034767.1 mouse_genomes_project 9 71247725 71255758 + MGP_NODShiLtJ_P0092472 Ppib protein_coding protein_coding MGP_NODShiLtJ_T0094387.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 120951718 120984004 + MGP_NODShiLtJ_P0094387 Smarcc1 protein_coding protein_coding MGP_NODShiLtJ_T0094388.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 120967568 121087639 + MGP_NODShiLtJ_P0094388 Smarcc1 protein_coding protein_coding MGP_NODShiLtJ_T0094389.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 120967625 121057259 + Smarcc1 protein_coding retained_intron MGP_NODShiLtJ_T0094390.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 120967625 121087639 + MGP_NODShiLtJ_P0094390 Smarcc1 protein_coding protein_coding MGP_NODShiLtJ_T0094391.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 120967625 121025726 + MGP_NODShiLtJ_P0094391 Smarcc1 protein_coding protein_coding MGP_NODShiLtJ_T0094392.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 120967625 121080428 + MGP_NODShiLtJ_P0094392 Smarcc1 protein_coding protein_coding MGP_NODShiLtJ_T0094393.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 121027154 121049465 + Smarcc1 protein_coding retained_intron MGP_NODShiLtJ_T0094394.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 121079923 121082532 + MGP_NODShiLtJ_P0094394 Smarcc1 protein_coding protein_coding MGP_NODShiLtJ_T0094395.1 MGP_NODShiLtJ_G0035139.1 mouse_genomes_project 9 121081525 121082523 + Smarcc1 protein_coding retained_intron MGP_NODShiLtJ_T0091271.1 MGP_NODShiLtJ_G0034344.1 mouse_genomes_project 9 37477040 37478621 - MGP_NODShiLtJ_P0091271 Gm17727 protein_coding protein_coding MGP_NODShiLtJ_T0093195.1 MGP_NODShiLtJ_G0034933.1 mouse_genomes_project 9 103960725 104553300 + MGP_NODShiLtJ_P0093195 Slc9a9 protein_coding protein_coding MGP_NODShiLtJ_T0093196.1 MGP_NODShiLtJ_G0034933.1 mouse_genomes_project 9 103960748 104010909 + Slc9a9 protein_coding processed_transcript MGP_NODShiLtJ_T0093197.1 MGP_NODShiLtJ_G0034933.1 mouse_genomes_project 9 104243086 104553307 + MGP_NODShiLtJ_P0093197 Slc9a9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093198.1 MGP_NODShiLtJ_G0034933.1 mouse_genomes_project 9 104442511 104445374 + Slc9a9 protein_coding retained_intron MGP_NODShiLtJ_T0098464.1 MGP_NODShiLtJ_G0036863.1 mouse_genomes_project 9 30763861 30765888 - Gm15521 sense_intronic sense_intronic MGP_NODShiLtJ_T0002314.1 MGP_NODShiLtJ_G0002224.1 mouse_genomes_project 9 77489357 77492050 - TEC TEC MGP_NODShiLtJ_T0092105.1 MGP_NODShiLtJ_G0034670.1 mouse_genomes_project 9 61937631 61943910 - MGP_NODShiLtJ_P0092105 Cplx3 protein_coding protein_coding MGP_NODShiLtJ_T0009240.1 MGP_NODShiLtJ_G0007418.1 mouse_genomes_project 9 112601128 112611724 + Gm29387 lincRNA lincRNA MGP_NODShiLtJ_T0011633.1 MGP_NODShiLtJ_G0009766.1 mouse_genomes_project 9 98349431 98349699 + Gm23759 misc_RNA misc_RNA MGP_NODShiLtJ_T0002333.1 MGP_NODShiLtJ_G0002243.1 mouse_genomes_project 9 78708788 78718857 + TEC TEC MGP_NODShiLtJ_T0093110.1 MGP_NODShiLtJ_G0034909.1 mouse_genomes_project 9 97050821 97059497 + MGP_NODShiLtJ_P0093110 protein_coding protein_coding MGP_NODShiLtJ_T0094560.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123066581 123193268 - MGP_NODShiLtJ_P0094560 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094561.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123066581 123191465 - MGP_NODShiLtJ_P0094561 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094562.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123066581 123191236 - MGP_NODShiLtJ_P0094562 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094563.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123066581 123193268 - MGP_NODShiLtJ_P0094563 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094564.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123066724 123191279 - MGP_NODShiLtJ_P0094564 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094565.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123066726 123243532 - Arpp21 protein_coding retained_intron MGP_NODShiLtJ_T0094566.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123066748 123244125 - MGP_NODShiLtJ_P0094566 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094567.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123066750 123241603 - MGP_NODShiLtJ_P0094567 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094568.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123067227 123193149 - MGP_NODShiLtJ_P0094568 Arpp21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094569.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123117648 123226384 - MGP_NODShiLtJ_P0094569 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094570.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123157082 123243950 - Arpp21 protein_coding retained_intron MGP_NODShiLtJ_T0094571.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123158095 123244125 - MGP_NODShiLtJ_P0094571 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094572.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123164736 123226474 - MGP_NODShiLtJ_P0094572 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094573.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123180128 123242735 - Arpp21 protein_coding retained_intron MGP_NODShiLtJ_T0094574.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123183605 123226449 - MGP_NODShiLtJ_P0094574 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094575.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123183651 123226449 - MGP_NODShiLtJ_P0094575 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094576.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123183689 123242924 - MGP_NODShiLtJ_P0094576 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094577.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123184574 123193428 - MGP_NODShiLtJ_P0094577 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094578.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123184574 123193431 - MGP_NODShiLtJ_P0094578 Arpp21 protein_coding protein_coding MGP_NODShiLtJ_T0094579.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123185514 123193406 - Arpp21 protein_coding retained_intron MGP_NODShiLtJ_T0094580.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123185520 123193451 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094581.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123185549 123193428 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094582.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123187194 123193382 - Arpp21 protein_coding retained_intron MGP_NODShiLtJ_T0094583.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123187224 123191609 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094584.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123187267 123191465 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094585.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123187521 123191452 - Arpp21 protein_coding retained_intron MGP_NODShiLtJ_T0094586.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123191244 123241004 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094587.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123193093 123242981 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094588.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123193130 123245047 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094589.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123193163 123193942 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094590.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123193431 123193976 - Arpp21 protein_coding processed_transcript MGP_NODShiLtJ_T0094591.1 MGP_NODShiLtJ_G0035173.1 mouse_genomes_project 9 123213326 123226427 - Arpp21 protein_coding retained_intron MGP_NODShiLtJ_T0002414.1 MGP_NODShiLtJ_G0002323.1 mouse_genomes_project 9 119414410 119414752 + TEC TEC MGP_NODShiLtJ_T0091648.1 MGP_NODShiLtJ_G0034519.1 mouse_genomes_project 9 48079803 48083355 - MGP_NODShiLtJ_P0091648 Ttc36 protein_coding protein_coding MGP_NODShiLtJ_T0093362.1 MGP_NODShiLtJ_G0034972.1 mouse_genomes_project 9 109306566 109315271 + MGP_NODShiLtJ_P0093362 Dbr1 protein_coding protein_coding MGP_NODShiLtJ_T0093363.1 MGP_NODShiLtJ_G0034972.1 mouse_genomes_project 9 109306595 109313205 + MGP_NODShiLtJ_P0093363 Dbr1 protein_coding protein_coding MGP_NODShiLtJ_T0093364.1 MGP_NODShiLtJ_G0034972.1 mouse_genomes_project 9 109306847 109312813 + MGP_NODShiLtJ_P0093364 Dbr1 protein_coding protein_coding MGP_NODShiLtJ_T0093365.1 MGP_NODShiLtJ_G0034972.1 mouse_genomes_project 9 109306875 109312822 + MGP_NODShiLtJ_P0093365 Dbr1 protein_coding protein_coding MGP_NODShiLtJ_T0093366.1 MGP_NODShiLtJ_G0034972.1 mouse_genomes_project 9 109310960 109314608 + MGP_NODShiLtJ_P0093366 Dbr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093367.1 MGP_NODShiLtJ_G0034972.1 mouse_genomes_project 9 109311055 109313453 + MGP_NODShiLtJ_P0093367 Dbr1 protein_coding protein_coding MGP_NODShiLtJ_T0091979.1 MGP_NODShiLtJ_G0034630.1 mouse_genomes_project 9 58949121 58981437 + MGP_NODShiLtJ_P0091979 Hykk protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091980.1 MGP_NODShiLtJ_G0034630.1 mouse_genomes_project 9 58949123 58981440 + MGP_NODShiLtJ_P0091980 Hykk protein_coding protein_coding MGP_NODShiLtJ_T0091981.1 MGP_NODShiLtJ_G0034630.1 mouse_genomes_project 9 58949151 58962770 + Hykk protein_coding retained_intron MGP_NODShiLtJ_T0091982.1 MGP_NODShiLtJ_G0034630.1 mouse_genomes_project 9 58949152 58969916 + Hykk protein_coding retained_intron MGP_NODShiLtJ_T0091983.1 MGP_NODShiLtJ_G0034630.1 mouse_genomes_project 9 58949187 58951081 + Hykk protein_coding processed_transcript MGP_NODShiLtJ_T0098465.1 MGP_NODShiLtJ_G0036864.1 mouse_genomes_project 9 44598180 44598490 + Gm28119 sense_intronic sense_intronic MGP_NODShiLtJ_T0009146.1 MGP_NODShiLtJ_G0007344.1 mouse_genomes_project 9 37971311 37972645 - lincRNA lincRNA MGP_NODShiLtJ_T0009147.1 MGP_NODShiLtJ_G0007344.1 mouse_genomes_project 9 37971352 37972697 - lincRNA lincRNA MGP_NODShiLtJ_T0094088.1 MGP_NODShiLtJ_G0035096.1 mouse_genomes_project 9 118967122 118990448 + MGP_NODShiLtJ_P0094088 BC048562 protein_coding protein_coding MGP_NODShiLtJ_T0094089.1 MGP_NODShiLtJ_G0035096.1 mouse_genomes_project 9 118967134 118990248 + BC048562 protein_coding processed_transcript MGP_NODShiLtJ_T0002342.1 MGP_NODShiLtJ_G0002252.1 mouse_genomes_project 9 83773938 83774948 - TEC TEC MGP_NODShiLtJ_T0009186.1 MGP_NODShiLtJ_G0007374.1 mouse_genomes_project 9 78143320 78143931 + Gm27255 lincRNA lincRNA MGP_NODShiLtJ_T0092399.1 MGP_NODShiLtJ_G0034744.1 mouse_genomes_project 9 70021005 70056569 - MGP_NODShiLtJ_P0092399 Hacd3 protein_coding protein_coding MGP_NODShiLtJ_T0093490.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113390003 113440914 + MGP_NODShiLtJ_P0093490 Topbp1 protein_coding protein_coding MGP_NODShiLtJ_T0093491.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113390019 113390784 + Topbp1 protein_coding retained_intron MGP_NODShiLtJ_T0093492.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113390291 113396327 + MGP_NODShiLtJ_P0093492 Topbp1 protein_coding protein_coding MGP_NODShiLtJ_T0093493.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113413761 113424325 + Topbp1 protein_coding retained_intron MGP_NODShiLtJ_T0093494.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113413787 113415589 + Topbp1 protein_coding retained_intron MGP_NODShiLtJ_T0093495.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113420116 113430961 + MGP_NODShiLtJ_P0093495 Topbp1 protein_coding protein_coding MGP_NODShiLtJ_T0093496.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113432552 113435666 + MGP_NODShiLtJ_P0093496 Topbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093497.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113432854 113433627 + Topbp1 protein_coding retained_intron MGP_NODShiLtJ_T0093498.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113434543 113436027 + Topbp1 protein_coding retained_intron MGP_NODShiLtJ_T0093499.1 MGP_NODShiLtJ_G0034998.1 mouse_genomes_project 9 113435164 113440387 + Topbp1 protein_coding retained_intron MGP_NODShiLtJ_T0093616.1 MGP_NODShiLtJ_G0035018.1 mouse_genomes_project 9 116130854 116238865 - MGP_NODShiLtJ_P0093616 Col6a5 protein_coding protein_coding MGP_NODShiLtJ_T0093617.1 MGP_NODShiLtJ_G0035018.1 mouse_genomes_project 9 116133392 116238865 - MGP_NODShiLtJ_P0093617 Col6a5 protein_coding protein_coding MGP_NODShiLtJ_T0093618.1 MGP_NODShiLtJ_G0035018.1 mouse_genomes_project 9 116150588 116156683 - Col6a5 protein_coding retained_intron MGP_NODShiLtJ_T0091527.1 MGP_NODShiLtJ_G0034483.1 mouse_genomes_project 9 46432314 46457622 + MGP_NODShiLtJ_P0091527 Trim29 protein_coding protein_coding MGP_NODShiLtJ_T0015920.1 MGP_NODShiLtJ_G0014028.1 mouse_genomes_project 9 37243313 37243583 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091076.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 22943102 23375402 + MGP_NODShiLtJ_P0091076 Bbs9 protein_coding protein_coding MGP_NODShiLtJ_T0091077.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 22943109 23375396 + MGP_NODShiLtJ_P0091077 Bbs9 protein_coding protein_coding MGP_NODShiLtJ_T0091078.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 22943118 22983237 + MGP_NODShiLtJ_P0091078 Bbs9 protein_coding protein_coding MGP_NODShiLtJ_T0091079.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 22943118 23375396 + MGP_NODShiLtJ_P0091079 Bbs9 protein_coding protein_coding MGP_NODShiLtJ_T0091080.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 22943254 22983283 + MGP_NODShiLtJ_P0091080 Bbs9 protein_coding protein_coding MGP_NODShiLtJ_T0091081.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 22958227 23375402 + MGP_NODShiLtJ_P0091081 Bbs9 protein_coding protein_coding MGP_NODShiLtJ_T0091082.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 22981640 23051542 + Bbs9 protein_coding processed_transcript MGP_NODShiLtJ_T0091083.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 23046513 23111924 + Bbs9 protein_coding processed_transcript MGP_NODShiLtJ_T0091084.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 23118452 23375402 + MGP_NODShiLtJ_P0091084 Bbs9 protein_coding protein_coding MGP_NODShiLtJ_T0091085.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 23126365 23375402 + MGP_NODShiLtJ_P0091085 Bbs9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091086.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 23142089 23166722 + Bbs9 protein_coding retained_intron MGP_NODShiLtJ_T0091087.1 MGP_NODShiLtJ_G0034288.1 mouse_genomes_project 9 23164958 23375396 + Bbs9 protein_coding retained_intron MGP_NODShiLtJ_T0101409.1 MGP_NODShiLtJ_G0039611.1 mouse_genomes_project 9 120116723 120409166 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0099615.1 MGP_NODShiLtJ_G0038009.1 mouse_genomes_project 9 73874254 73874361 - Gm22169 snRNA snRNA MGP_NODShiLtJ_T0094593.1 MGP_NODShiLtJ_G0035175.1 mouse_genomes_project 9 124813934 124877293 - MGP_NODShiLtJ_P0094593 Pdcd6ip protein_coding protein_coding MGP_NODShiLtJ_T0094594.1 MGP_NODShiLtJ_G0035175.1 mouse_genomes_project 9 124816662 124877278 - MGP_NODShiLtJ_P0094594 Pdcd6ip protein_coding protein_coding MGP_NODShiLtJ_T0094595.1 MGP_NODShiLtJ_G0035175.1 mouse_genomes_project 9 124817756 124819481 - Pdcd6ip protein_coding retained_intron MGP_NODShiLtJ_T0094596.1 MGP_NODShiLtJ_G0035175.1 mouse_genomes_project 9 124821825 124824605 - Pdcd6ip protein_coding retained_intron MGP_NODShiLtJ_T0094597.1 MGP_NODShiLtJ_G0035175.1 mouse_genomes_project 9 124841685 124852639 - Pdcd6ip protein_coding processed_transcript MGP_NODShiLtJ_T0094598.1 MGP_NODShiLtJ_G0035175.1 mouse_genomes_project 9 124854736 124865660 - Pdcd6ip protein_coding retained_intron MGP_NODShiLtJ_T0011638.1 MGP_NODShiLtJ_G0009771.1 mouse_genomes_project 9 122184580 122184856 - Gm24860 misc_RNA misc_RNA MGP_NODShiLtJ_T0092098.1 MGP_NODShiLtJ_G0034667.1 mouse_genomes_project 9 61877675 61886189 - MGP_NODShiLtJ_P0092098 Mpi protein_coding protein_coding MGP_NODShiLtJ_T0092099.1 MGP_NODShiLtJ_G0034667.1 mouse_genomes_project 9 61881685 61885692 - Mpi protein_coding retained_intron MGP_NODShiLtJ_T0092100.1 MGP_NODShiLtJ_G0034667.1 mouse_genomes_project 9 61882014 61883097 - Mpi protein_coding retained_intron MGP_NODShiLtJ_T0092101.1 MGP_NODShiLtJ_G0034667.1 mouse_genomes_project 9 61882554 61886135 - MGP_NODShiLtJ_P0092101 Mpi protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092102.1 MGP_NODShiLtJ_G0034667.1 mouse_genomes_project 9 61883402 61886142 - Mpi protein_coding retained_intron MGP_NODShiLtJ_T0092397.1 MGP_NODShiLtJ_G0034743.1 mouse_genomes_project 9 69993970 70020995 + MGP_NODShiLtJ_P0092397 Vwa9 protein_coding protein_coding MGP_NODShiLtJ_T0092398.1 MGP_NODShiLtJ_G0034743.1 mouse_genomes_project 9 69994075 70020995 + MGP_NODShiLtJ_P0092398 Vwa9 protein_coding protein_coding MGP_NODShiLtJ_T0092895.1 MGP_NODShiLtJ_G0034866.1 mouse_genomes_project 9 85113705 85128549 - MGP_NODShiLtJ_P0092895 Mb21d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092896.1 MGP_NODShiLtJ_G0034866.1 mouse_genomes_project 9 85114841 85128742 - MGP_NODShiLtJ_P0092896 Mb21d1 protein_coding protein_coding MGP_NODShiLtJ_T0099640.1 MGP_NODShiLtJ_G0038034.1 mouse_genomes_project 9 117163237 117163342 - Gm22384 snRNA snRNA MGP_NODShiLtJ_T0092894.1 MGP_NODShiLtJ_G0034865.1 mouse_genomes_project 9 85064221 85103723 + MGP_NODShiLtJ_P0092894 Ddx43 protein_coding protein_coding MGP_NODShiLtJ_T0091910.1 MGP_NODShiLtJ_G0034601.1 mouse_genomes_project 9 55736984 55757219 - MGP_NODShiLtJ_P0091910 Fdx1 protein_coding protein_coding MGP_NODShiLtJ_T0092725.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78809958 78842480 + MGP_NODShiLtJ_P0092725 Ccpg1 protein_coding protein_coding MGP_NODShiLtJ_T0092726.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78810033 78827879 + MGP_NODShiLtJ_P0092726 Ccpg1 protein_coding protein_coding MGP_NODShiLtJ_T0092727.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78810107 78840078 + MGP_NODShiLtJ_P0092727 Ccpg1 protein_coding protein_coding MGP_NODShiLtJ_T0092728.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78810115 78812589 + Ccpg1 protein_coding retained_intron MGP_NODShiLtJ_T0092729.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78810134 78842140 + MGP_NODShiLtJ_P0092729 Ccpg1 protein_coding protein_coding MGP_NODShiLtJ_T0092730.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78810134 78842478 + MGP_NODShiLtJ_P0092730 Ccpg1 protein_coding protein_coding MGP_NODShiLtJ_T0092731.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78810137 78828151 + Ccpg1 protein_coding retained_intron MGP_NODShiLtJ_T0092732.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78810148 78840071 + MGP_NODShiLtJ_P0092732 Ccpg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092735.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78836027 78838117 + Ccpg1 protein_coding retained_intron MGP_NODShiLtJ_T0092738.1 MGP_NODShiLtJ_G0034820.1 mouse_genomes_project 9 78841112 78842480 + Ccpg1 protein_coding retained_intron MGP_NODShiLtJ_T0010994.1 MGP_NODShiLtJ_G0009127.1 mouse_genomes_project 9 121517181 121517298 - Mir8107 miRNA miRNA MGP_NODShiLtJ_T0091749.1 MGP_NODShiLtJ_G0034551.1 mouse_genomes_project 9 49619187 49627488 + MGP_NODShiLtJ_P0091749 Zpr1 protein_coding protein_coding MGP_NODShiLtJ_T0091750.1 MGP_NODShiLtJ_G0034551.1 mouse_genomes_project 9 49619187 49628647 + MGP_NODShiLtJ_P0091750 Zpr1 protein_coding protein_coding MGP_NODShiLtJ_T0091751.1 MGP_NODShiLtJ_G0034551.1 mouse_genomes_project 9 49619279 49621780 + MGP_NODShiLtJ_P0091751 Zpr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091752.1 MGP_NODShiLtJ_G0034551.1 mouse_genomes_project 9 49619622 49622728 + Zpr1 protein_coding retained_intron MGP_NODShiLtJ_T0091753.1 MGP_NODShiLtJ_G0034551.1 mouse_genomes_project 9 49621447 49622600 + Zpr1 protein_coding retained_intron MGP_NODShiLtJ_T0091754.1 MGP_NODShiLtJ_G0034551.1 mouse_genomes_project 9 49622124 49623647 + Zpr1 protein_coding retained_intron MGP_NODShiLtJ_T0091556.1 MGP_NODShiLtJ_G0034491.1 mouse_genomes_project 9 47300588 47303642 - MGP_NODShiLtJ_P0091556 protein_coding protein_coding MGP_NODShiLtJ_T0090896.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20683731 20693451 - MGP_NODShiLtJ_P0090896 Zfp426 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090897.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20683890 20707926 - MGP_NODShiLtJ_P0090897 Zfp426 protein_coding protein_coding MGP_NODShiLtJ_T0090898.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20684102 20707929 - MGP_NODShiLtJ_P0090898 Zfp426 protein_coding protein_coding MGP_NODShiLtJ_T0090899.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20685008 20707926 - MGP_NODShiLtJ_P0090899 Zfp426 protein_coding protein_coding MGP_NODShiLtJ_T0090900.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20686167 20688645 - Zfp426 protein_coding retained_intron MGP_NODShiLtJ_T0090901.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20686313 20707915 - MGP_NODShiLtJ_P0090901 Zfp426 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090902.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20686358 20705990 - MGP_NODShiLtJ_P0090902 Zfp426 protein_coding protein_coding MGP_NODShiLtJ_T0090903.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20688287 20693435 - MGP_NODShiLtJ_P0090903 Zfp426 protein_coding protein_coding MGP_NODShiLtJ_T0090904.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20690118 20707885 - MGP_NODShiLtJ_P0090904 Zfp426 protein_coding protein_coding MGP_NODShiLtJ_T0090905.1 MGP_NODShiLtJ_G0034218.1 mouse_genomes_project 9 20691610 20707895 - MGP_NODShiLtJ_P0090905 Zfp426 protein_coding protein_coding MGP_NODShiLtJ_T0010993.1 MGP_NODShiLtJ_G0009126.1 mouse_genomes_project 9 121129826 121129949 + Mir6236 miRNA miRNA MGP_NODShiLtJ_T0010972.1 MGP_NODShiLtJ_G0009105.1 mouse_genomes_project 9 75949165 75949225 - Mir5626 miRNA miRNA MGP_NODShiLtJ_T0094720.1 MGP_NODShiLtJ_G0035217.1 mouse_genomes_project 9 131138184 131177663 + MGP_NODShiLtJ_P0094720 Xylb protein_coding protein_coding MGP_NODShiLtJ_T0015927.1 MGP_NODShiLtJ_G0014035.1 mouse_genomes_project 9 49157438 49158445 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092486.1 MGP_NODShiLtJ_G0034772.1 mouse_genomes_project 9 71558789 71584830 + protein_coding retained_intron MGP_NODShiLtJ_T0092487.1 MGP_NODShiLtJ_G0034772.1 mouse_genomes_project 9 71558816 71755797 + MGP_NODShiLtJ_P0092487 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092488.1 MGP_NODShiLtJ_G0034772.1 mouse_genomes_project 9 71558865 71756248 + MGP_NODShiLtJ_P0092488 protein_coding protein_coding MGP_NODShiLtJ_T0092489.1 MGP_NODShiLtJ_G0034772.1 mouse_genomes_project 9 71680735 71694326 + protein_coding retained_intron MGP_NODShiLtJ_T0092490.1 MGP_NODShiLtJ_G0034772.1 mouse_genomes_project 9 71693152 71707269 + MGP_NODShiLtJ_P0092490 protein_coding protein_coding MGP_NODShiLtJ_T0092491.1 MGP_NODShiLtJ_G0034772.1 mouse_genomes_project 9 71714253 71722346 + protein_coding retained_intron MGP_NODShiLtJ_T0092492.1 MGP_NODShiLtJ_G0034772.1 mouse_genomes_project 9 71743622 71748285 + protein_coding retained_intron MGP_NODShiLtJ_T0092493.1 MGP_NODShiLtJ_G0034772.1 mouse_genomes_project 9 71748018 71755066 + protein_coding retained_intron MGP_NODShiLtJ_T0002313.1 MGP_NODShiLtJ_G0002223.1 mouse_genomes_project 9 62990695 62991726 + TEC TEC MGP_NODShiLtJ_T0091851.1 MGP_NODShiLtJ_G0034585.1 mouse_genomes_project 9 54429059 54435911 - MGP_NODShiLtJ_P0091851 2310030G06Rik protein_coding protein_coding MGP_NODShiLtJ_T0092406.1 MGP_NODShiLtJ_G0034748.1 mouse_genomes_project 9 70263709 70289057 + MGP_NODShiLtJ_P0092406 Parp16 protein_coding protein_coding MGP_NODShiLtJ_T0091790.1 MGP_NODShiLtJ_G0034565.1 mouse_genomes_project 9 52525644 52556625 - MGP_NODShiLtJ_P0091790 Htr3b protein_coding protein_coding MGP_NODShiLtJ_T0100898.1 MGP_NODShiLtJ_G0039292.1 mouse_genomes_project 9 73926559 73926632 + Gm22962 snoRNA snoRNA MGP_NODShiLtJ_T0091574.1 MGP_NODShiLtJ_G0034496.1 mouse_genomes_project 9 47449000 47464333 - MGP_NODShiLtJ_P0091574 Nlrx1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094752.1 MGP_NODShiLtJ_G0035231.1 mouse_genomes_project 9 131975209 131980760 + MGP_NODShiLtJ_P0094752 Rpsa protein_coding protein_coding MGP_NODShiLtJ_T0094889.1 MGP_NODShiLtJ_G0035276.1 mouse_genomes_project 9 135570519 135615224 + MGP_NODShiLtJ_P0094889 Limd1 protein_coding protein_coding MGP_NODShiLtJ_T0094603.1 MGP_NODShiLtJ_G0035178.1 mouse_genomes_project 9 125121530 125175712 + MGP_NODShiLtJ_P0094603 Ubp1 protein_coding protein_coding MGP_NODShiLtJ_T0094604.1 MGP_NODShiLtJ_G0035178.1 mouse_genomes_project 9 125121530 125175712 + MGP_NODShiLtJ_P0094604 Ubp1 protein_coding protein_coding MGP_NODShiLtJ_T0094605.1 MGP_NODShiLtJ_G0035178.1 mouse_genomes_project 9 125123365 125175227 + MGP_NODShiLtJ_P0094605 Ubp1 protein_coding protein_coding MGP_NODShiLtJ_T0002396.1 MGP_NODShiLtJ_G0002305.1 mouse_genomes_project 9 113544232 113544550 + TEC TEC MGP_NODShiLtJ_T0010956.1 MGP_NODShiLtJ_G0009089.1 mouse_genomes_project 9 54815103 54815180 - Mir34c miRNA miRNA MGP_NODShiLtJ_T0091402.1 MGP_NODShiLtJ_G0034412.1 mouse_genomes_project 9 41039199 41040147 - MGP_NODShiLtJ_P0091402 Olfr919 protein_coding protein_coding MGP_NODShiLtJ_T0010946.1 MGP_NODShiLtJ_G0009079.1 mouse_genomes_project 9 44545587 44545667 + Mir100 miRNA miRNA MGP_NODShiLtJ_T0011626.1 MGP_NODShiLtJ_G0009759.1 mouse_genomes_project 9 47577033 47577310 + Gm22141 misc_RNA misc_RNA MGP_NODShiLtJ_T0092707.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78454815 78553326 + MGP_NODShiLtJ_P0092707 Nedd4 protein_coding protein_coding MGP_NODShiLtJ_T0092708.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78454907 78465020 + Nedd4 protein_coding retained_intron MGP_NODShiLtJ_T0092709.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78454951 78518409 + MGP_NODShiLtJ_P0092709 Nedd4 protein_coding protein_coding MGP_NODShiLtJ_T0092710.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78454956 78509873 + MGP_NODShiLtJ_P0092710 Nedd4 protein_coding protein_coding MGP_NODShiLtJ_T0092711.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78454959 78455770 + Nedd4 protein_coding processed_transcript MGP_NODShiLtJ_T0092712.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78461646 78465001 + Nedd4 protein_coding retained_intron MGP_NODShiLtJ_T0092713.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78461657 78517974 + MGP_NODShiLtJ_P0092713 Nedd4 protein_coding protein_coding MGP_NODShiLtJ_T0092714.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78542991 78551633 + MGP_NODShiLtJ_P0092714 Nedd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092715.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78544965 78550628 + Nedd4 protein_coding retained_intron MGP_NODShiLtJ_T0092716.1 MGP_NODShiLtJ_G0034814.1 mouse_genomes_project 9 78549322 78550738 + Nedd4 protein_coding retained_intron MGP_NODShiLtJ_T0094520.1 MGP_NODShiLtJ_G0035166.1 mouse_genomes_project 9 121981977 121984759 - MGP_NODShiLtJ_P0094520 Ccrl2 protein_coding protein_coding MGP_NODShiLtJ_T0094521.1 MGP_NODShiLtJ_G0035166.1 mouse_genomes_project 9 121982323 121985008 - MGP_NODShiLtJ_P0094521 Ccrl2 protein_coding protein_coding MGP_NODShiLtJ_T0094522.1 MGP_NODShiLtJ_G0035166.1 mouse_genomes_project 9 121983518 121984735 - MGP_NODShiLtJ_P0094522 Ccrl2 protein_coding protein_coding MGP_NODShiLtJ_T0092045.1 MGP_NODShiLtJ_G0034648.1 mouse_genomes_project 9 60613643 60698600 + MGP_NODShiLtJ_P0092045 Hmg20a protein_coding protein_coding MGP_NODShiLtJ_T0009248.1 MGP_NODShiLtJ_G0007425.1 mouse_genomes_project 9 117776398 117777168 - 4930429P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0009249.1 MGP_NODShiLtJ_G0007425.1 mouse_genomes_project 9 117776903 117779123 - 4930429P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0009185.1 MGP_NODShiLtJ_G0007373.1 mouse_genomes_project 9 77886391 77909748 - Gm27188 lincRNA lincRNA MGP_NODShiLtJ_T0091587.1 MGP_NODShiLtJ_G0034500.1 mouse_genomes_project 9 47531378 47538165 + MGP_NODShiLtJ_P0091587 Dpagt1 protein_coding protein_coding MGP_NODShiLtJ_T0010968.1 MGP_NODShiLtJ_G0009101.1 mouse_genomes_project 9 72530944 72531011 - Mir190a miRNA miRNA MGP_NODShiLtJ_T0093218.1 MGP_NODShiLtJ_G0034939.1 mouse_genomes_project 9 105134206 105241817 - MGP_NODShiLtJ_P0093218 Pls1 protein_coding protein_coding MGP_NODShiLtJ_T0093219.1 MGP_NODShiLtJ_G0034939.1 mouse_genomes_project 9 105170762 105211046 - MGP_NODShiLtJ_P0093219 Pls1 protein_coding protein_coding MGP_NODShiLtJ_T0093220.1 MGP_NODShiLtJ_G0034939.1 mouse_genomes_project 9 105172135 105241842 - Pls1 protein_coding processed_transcript MGP_NODShiLtJ_T0090751.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12672088 12692137 - MGP_NODShiLtJ_P0090751 Cep57 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090752.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12672091 12692198 - MGP_NODShiLtJ_P0090752 Cep57 protein_coding protein_coding MGP_NODShiLtJ_T0090753.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12672121 12692101 - MGP_NODShiLtJ_P0090753 Cep57 protein_coding protein_coding MGP_NODShiLtJ_T0090754.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12672845 12692171 - MGP_NODShiLtJ_P0090754 Cep57 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090755.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12672903 12692046 - MGP_NODShiLtJ_P0090755 Cep57 protein_coding protein_coding MGP_NODShiLtJ_T0090756.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12673043 12674711 - Cep57 protein_coding retained_intron MGP_NODShiLtJ_T0090757.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12673112 12682962 - MGP_NODShiLtJ_P0090757 Cep57 protein_coding protein_coding MGP_NODShiLtJ_T0090758.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12675016 12683206 - MGP_NODShiLtJ_P0090758 Cep57 protein_coding protein_coding MGP_NODShiLtJ_T0090759.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12677352 12683242 - Cep57 protein_coding retained_intron MGP_NODShiLtJ_T0090760.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12677728 12692199 - MGP_NODShiLtJ_P0090760 Cep57 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090761.1 MGP_NODShiLtJ_G0034147.1 mouse_genomes_project 9 12677743 12680694 - Cep57 protein_coding retained_intron MGP_NODShiLtJ_T0009201.1 MGP_NODShiLtJ_G0007388.1 mouse_genomes_project 9 88516859 88523938 + lincRNA lincRNA MGP_NODShiLtJ_T0092809.1 MGP_NODShiLtJ_G0034840.1 mouse_genomes_project 9 81717564 81729569 + MGP_NODShiLtJ_P0092809 Lysmd2 protein_coding protein_coding MGP_NODShiLtJ_T0009169.1 MGP_NODShiLtJ_G0007362.1 mouse_genomes_project 9 62798570 62802263 + 1700072B07Rik lincRNA lincRNA MGP_NODShiLtJ_T0018366.1 MGP_NODShiLtJ_G0015603.1 mouse_genomes_project 9 47295600 47297260 - Gm20444 processed_transcript processed_transcript MGP_NODShiLtJ_T0097847.1 MGP_NODShiLtJ_G0036259.1 mouse_genomes_project 9 18518430 18518699 - pseudogene pseudogene MGP_NODShiLtJ_T0091985.1 MGP_NODShiLtJ_G0034632.1 mouse_genomes_project 9 58982293 58989703 + MGP_NODShiLtJ_P0091985 Psma4 protein_coding protein_coding MGP_NODShiLtJ_T0091986.1 MGP_NODShiLtJ_G0034632.1 mouse_genomes_project 9 58982301 58987890 + Psma4 protein_coding retained_intron MGP_NODShiLtJ_T0091987.1 MGP_NODShiLtJ_G0034632.1 mouse_genomes_project 9 58982308 58986536 + Psma4 protein_coding retained_intron MGP_NODShiLtJ_T0091988.1 MGP_NODShiLtJ_G0034632.1 mouse_genomes_project 9 58982318 58984310 + Psma4 protein_coding processed_transcript MGP_NODShiLtJ_T0091989.1 MGP_NODShiLtJ_G0034632.1 mouse_genomes_project 9 58982318 58988437 + MGP_NODShiLtJ_P0091989 Psma4 protein_coding protein_coding MGP_NODShiLtJ_T0091990.1 MGP_NODShiLtJ_G0034632.1 mouse_genomes_project 9 58982393 58984930 + Psma4 protein_coding retained_intron MGP_NODShiLtJ_T0091991.1 MGP_NODShiLtJ_G0034632.1 mouse_genomes_project 9 58982607 58987803 + MGP_NODShiLtJ_P0091991 Psma4 protein_coding protein_coding MGP_NODShiLtJ_T0009141.1 MGP_NODShiLtJ_G0007340.1 mouse_genomes_project 9 36220261 36221040 - Gm26662 lincRNA lincRNA MGP_NODShiLtJ_T0009215.1 MGP_NODShiLtJ_G0007398.1 mouse_genomes_project 9 99326903 99330462 - Gm28703 lincRNA lincRNA MGP_NODShiLtJ_T0010942.1 MGP_NODShiLtJ_G0009075.1 mouse_genomes_project 9 29358706 29358803 + Gm44316 miRNA miRNA MGP_NODShiLtJ_T0094338.1 MGP_NODShiLtJ_G0035136.1 mouse_genomes_project 9 120668817 120687731 + MGP_NODShiLtJ_P0094338 Cdc25a protein_coding protein_coding MGP_NODShiLtJ_T0094339.1 MGP_NODShiLtJ_G0035136.1 mouse_genomes_project 9 120669178 120675230 + MGP_NODShiLtJ_P0094339 Cdc25a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094340.1 MGP_NODShiLtJ_G0035136.1 mouse_genomes_project 9 120669544 120686484 + MGP_NODShiLtJ_P0094340 Cdc25a protein_coding protein_coding MGP_NODShiLtJ_T0094342.1 MGP_NODShiLtJ_G0035136.1 mouse_genomes_project 9 120678166 120683837 + Cdc25a protein_coding retained_intron MGP_NODShiLtJ_T0094343.1 MGP_NODShiLtJ_G0035136.1 mouse_genomes_project 9 120681552 120686204 + Cdc25a protein_coding retained_intron MGP_NODShiLtJ_T0094344.1 MGP_NODShiLtJ_G0035136.1 mouse_genomes_project 9 120682672 120683207 + Cdc25a protein_coding retained_intron MGP_NODShiLtJ_T0091403.1 MGP_NODShiLtJ_G0034413.1 mouse_genomes_project 9 41055948 41082764 + MGP_NODShiLtJ_P0091403 Vwa5a protein_coding protein_coding MGP_NODShiLtJ_T0091404.1 MGP_NODShiLtJ_G0034413.1 mouse_genomes_project 9 41055952 41081743 + MGP_NODShiLtJ_P0091404 Vwa5a protein_coding protein_coding MGP_NODShiLtJ_T0091405.1 MGP_NODShiLtJ_G0034413.1 mouse_genomes_project 9 41056718 41060297 + MGP_NODShiLtJ_P0091405 Vwa5a protein_coding protein_coding MGP_NODShiLtJ_T0091406.1 MGP_NODShiLtJ_G0034413.1 mouse_genomes_project 9 41067560 41073700 + Vwa5a protein_coding retained_intron MGP_NODShiLtJ_T0091407.1 MGP_NODShiLtJ_G0034413.1 mouse_genomes_project 9 41073491 41075127 + Vwa5a protein_coding retained_intron MGP_NODShiLtJ_T0091408.1 MGP_NODShiLtJ_G0034413.1 mouse_genomes_project 9 41074967 41076971 + Vwa5a protein_coding retained_intron MGP_NODShiLtJ_T0091409.1 MGP_NODShiLtJ_G0034413.1 mouse_genomes_project 9 41075165 41080901 + MGP_NODShiLtJ_P0091409 Vwa5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094757.1 MGP_NODShiLtJ_G0035233.1 mouse_genomes_project 9 132162710 132342730 + MGP_NODShiLtJ_P0094757 Myrip protein_coding protein_coding MGP_NODShiLtJ_T0094758.1 MGP_NODShiLtJ_G0035233.1 mouse_genomes_project 9 132250479 132289581 + MGP_NODShiLtJ_P0094758 Myrip protein_coding protein_coding MGP_NODShiLtJ_T0094759.1 MGP_NODShiLtJ_G0035233.1 mouse_genomes_project 9 132274869 132282128 + Myrip protein_coding processed_transcript MGP_NODShiLtJ_T0094760.1 MGP_NODShiLtJ_G0035233.1 mouse_genomes_project 9 132292325 132297403 + Myrip protein_coding processed_transcript MGP_NODShiLtJ_T0090871.1 MGP_NODShiLtJ_G0034199.1 mouse_genomes_project 9 19259838 19260756 - MGP_NODShiLtJ_P0090871 Olfr853 protein_coding protein_coding MGP_NODShiLtJ_T0091400.1 MGP_NODShiLtJ_G0034410.1 mouse_genomes_project 9 40982110 40983040 - MGP_NODShiLtJ_P0091400 Olfr917 protein_coding protein_coding MGP_NODShiLtJ_T0000343.1 MGP_NODShiLtJ_G0000281.1 mouse_genomes_project 9 135177378 135177445 - mt-Tw Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0005380.1 MGP_NODShiLtJ_G0004554.1 mouse_genomes_project 9 54164845 54183985 - Plet1os antisense antisense MGP_NODShiLtJ_T0005381.1 MGP_NODShiLtJ_G0004554.1 mouse_genomes_project 9 54164849 54180981 - Plet1os antisense antisense MGP_NODShiLtJ_T0002399.1 MGP_NODShiLtJ_G0002308.1 mouse_genomes_project 9 114162188 114164361 - TEC TEC MGP_NODShiLtJ_T0009227.1 MGP_NODShiLtJ_G0007406.1 mouse_genomes_project 9 105919379 105921736 - BC043934 lincRNA lincRNA MGP_NODShiLtJ_T0009228.1 MGP_NODShiLtJ_G0007406.1 mouse_genomes_project 9 105919380 105921032 - BC043934 lincRNA lincRNA MGP_NODShiLtJ_T0101202.1 MGP_NODShiLtJ_G0039508.1 mouse_genomes_project 9 43366657 43367237 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0094064.1 MGP_NODShiLtJ_G0035090.1 mouse_genomes_project 9 118826944 118833502 - MGP_NODShiLtJ_P0094064 Tcta protein_coding protein_coding MGP_NODShiLtJ_T0094065.1 MGP_NODShiLtJ_G0035090.1 mouse_genomes_project 9 118827640 118833672 - MGP_NODShiLtJ_P0094065 Tcta protein_coding protein_coding MGP_NODShiLtJ_T0094066.1 MGP_NODShiLtJ_G0035090.1 mouse_genomes_project 9 118827876 118833460 - MGP_NODShiLtJ_P0094066 Tcta protein_coding protein_coding MGP_NODShiLtJ_T0101203.1 MGP_NODShiLtJ_G0039509.1 mouse_genomes_project 9 61158075 61158634 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0091778.1 MGP_NODShiLtJ_G0034558.1 mouse_genomes_project 9 51969171 51981110 + MGP_NODShiLtJ_P0091778 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0016025.1 MGP_NODShiLtJ_G0014133.1 mouse_genomes_project 9 110502206 110503198 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016033.1 MGP_NODShiLtJ_G0014141.1 mouse_genomes_project 9 113507644 113508021 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091382.1 MGP_NODShiLtJ_G0034392.1 mouse_genomes_project 9 40407634 40408576 + MGP_NODShiLtJ_P0091382 Olfr143 protein_coding protein_coding MGP_NODShiLtJ_T0094304.1 MGP_NODShiLtJ_G0035126.1 mouse_genomes_project 9 119658698 119685252 + MGP_NODShiLtJ_P0094304 Plxnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094305.1 MGP_NODShiLtJ_G0035126.1 mouse_genomes_project 9 119660173 119664721 + MGP_NODShiLtJ_P0094305 Plxnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094306.1 MGP_NODShiLtJ_G0035126.1 mouse_genomes_project 9 119660931 119664721 + MGP_NODShiLtJ_P0094306 Plxnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094307.1 MGP_NODShiLtJ_G0035126.1 mouse_genomes_project 9 119669198 119674179 + MGP_NODShiLtJ_P0094307 Plxnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094308.1 MGP_NODShiLtJ_G0035126.1 mouse_genomes_project 9 119669747 119671054 + Plxnb1 protein_coding retained_intron MGP_NODShiLtJ_T0094309.1 MGP_NODShiLtJ_G0035126.1 mouse_genomes_project 9 119670209 119671178 + Plxnb1 protein_coding retained_intron MGP_NODShiLtJ_T0094310.1 MGP_NODShiLtJ_G0035126.1 mouse_genomes_project 9 119671040 119674208 + Plxnb1 protein_coding retained_intron MGP_NODShiLtJ_T0092229.1 MGP_NODShiLtJ_G0034705.1 mouse_genomes_project 9 64327056 64559351 + MGP_NODShiLtJ_P0092229 Myo9a protein_coding protein_coding MGP_NODShiLtJ_T0092230.1 MGP_NODShiLtJ_G0034705.1 mouse_genomes_project 9 64327056 64559351 + MGP_NODShiLtJ_P0092230 Myo9a protein_coding protein_coding MGP_NODShiLtJ_T0092231.1 MGP_NODShiLtJ_G0034705.1 mouse_genomes_project 9 64327056 64559351 + MGP_NODShiLtJ_P0092231 Myo9a protein_coding protein_coding MGP_NODShiLtJ_T0092232.1 MGP_NODShiLtJ_G0034705.1 mouse_genomes_project 9 64495753 64509653 + Myo9a protein_coding processed_transcript MGP_NODShiLtJ_T0092233.1 MGP_NODShiLtJ_G0034705.1 mouse_genomes_project 9 64524990 64534671 + Myo9a protein_coding retained_intron MGP_NODShiLtJ_T0092234.1 MGP_NODShiLtJ_G0034705.1 mouse_genomes_project 9 64534243 64540587 + Myo9a protein_coding retained_intron MGP_NODShiLtJ_T0092235.1 MGP_NODShiLtJ_G0034705.1 mouse_genomes_project 9 64535496 64542510 + Myo9a protein_coding retained_intron MGP_NODShiLtJ_T0092236.1 MGP_NODShiLtJ_G0034705.1 mouse_genomes_project 9 64539834 64540877 + Myo9a protein_coding retained_intron MGP_NODShiLtJ_T0100931.1 MGP_NODShiLtJ_G0039325.1 mouse_genomes_project 9 131977844 131977993 + Snora62 snoRNA snoRNA MGP_NODShiLtJ_T0005369.1 MGP_NODShiLtJ_G0004545.1 mouse_genomes_project 9 38702352 38721839 + Gm26787 antisense antisense MGP_NODShiLtJ_T0091062.1 MGP_NODShiLtJ_G0034278.1 mouse_genomes_project 9 22516380 22521492 - MGP_NODShiLtJ_P0091062 Acp5 protein_coding protein_coding MGP_NODShiLtJ_T0091063.1 MGP_NODShiLtJ_G0034278.1 mouse_genomes_project 9 22516380 22525460 - MGP_NODShiLtJ_P0091063 Acp5 protein_coding protein_coding MGP_NODShiLtJ_T0091064.1 MGP_NODShiLtJ_G0034278.1 mouse_genomes_project 9 22516380 22520226 - MGP_NODShiLtJ_P0091064 Acp5 protein_coding protein_coding MGP_NODShiLtJ_T0090830.1 MGP_NODShiLtJ_G0034171.1 mouse_genomes_project 9 14866075 14918086 - MGP_NODShiLtJ_P0090830 Mtnr1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090831.1 MGP_NODShiLtJ_G0034171.1 mouse_genomes_project 9 14906205 14917990 - MGP_NODShiLtJ_P0090831 Mtnr1b protein_coding protein_coding MGP_NODShiLtJ_T0005362.1 MGP_NODShiLtJ_G0004538.1 mouse_genomes_project 9 22591265 22635152 - antisense antisense MGP_NODShiLtJ_T0016008.1 MGP_NODShiLtJ_G0014116.1 mouse_genomes_project 9 104739411 104740397 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099603.1 MGP_NODShiLtJ_G0037997.1 mouse_genomes_project 9 54589175 54589281 + Gm25558 snRNA snRNA MGP_NODShiLtJ_T0009259.1 MGP_NODShiLtJ_G0007431.1 mouse_genomes_project 9 121139453 121144438 - Gm42775 lincRNA lincRNA MGP_NODShiLtJ_T0005494.1 MGP_NODShiLtJ_G0004632.1 mouse_genomes_project 9 127511067 127523055 - Gm16142 antisense antisense MGP_NODShiLtJ_T0093129.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98374763 98387939 + MGP_NODShiLtJ_P0093129 Ctsh protein_coding protein_coding MGP_NODShiLtJ_T0093130.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98374878 98415250 + MGP_NODShiLtJ_P0093130 Ctsh protein_coding protein_coding MGP_NODShiLtJ_T0093131.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98375117 98415248 + Ctsh protein_coding retained_intron MGP_NODShiLtJ_T0093132.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98375132 98375950 + Ctsh protein_coding retained_intron MGP_NODShiLtJ_T0093133.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98375148 98386756 + MGP_NODShiLtJ_P0093133 Ctsh protein_coding protein_coding MGP_NODShiLtJ_T0093134.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98375149 98415248 + MGP_NODShiLtJ_P0093134 Ctsh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093135.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98375165 98389861 + Ctsh protein_coding retained_intron MGP_NODShiLtJ_T0093136.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98375170 98414902 + MGP_NODShiLtJ_P0093136 Ctsh protein_coding protein_coding MGP_NODShiLtJ_T0093137.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98381176 98382647 + Ctsh protein_coding retained_intron MGP_NODShiLtJ_T0093138.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98385038 98394448 + Ctsh protein_coding retained_intron MGP_NODShiLtJ_T0093139.1 MGP_NODShiLtJ_G0034920.1 mouse_genomes_project 9 98394258 98414910 + Ctsh protein_coding retained_intron MGP_NODShiLtJ_T0091492.1 MGP_NODShiLtJ_G0034470.1 mouse_genomes_project 9 43830691 43833461 - protein_coding retained_intron MGP_NODShiLtJ_T0091493.1 MGP_NODShiLtJ_G0034470.1 mouse_genomes_project 9 43831374 43895900 - MGP_NODShiLtJ_P0091493 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091494.1 MGP_NODShiLtJ_G0034470.1 mouse_genomes_project 9 43892219 43893659 - MGP_NODShiLtJ_P0091494 protein_coding protein_coding MGP_NODShiLtJ_T0009130.1 MGP_NODShiLtJ_G0007329.1 mouse_genomes_project 9 22065661 22072252 - Gm26511 lincRNA lincRNA MGP_NODShiLtJ_T0090684.1 MGP_NODShiLtJ_G0034122.1 mouse_genomes_project 9 5204385 5226680 - MGP_NODShiLtJ_P0090684 Mmp1b protein_coding protein_coding MGP_NODShiLtJ_T0090802.1 MGP_NODShiLtJ_G0034163.1 mouse_genomes_project 9 14219299 14243112 + MGP_NODShiLtJ_P0090802 Vstm5 protein_coding protein_coding MGP_NODShiLtJ_T0091742.1 MGP_NODShiLtJ_G0034548.1 mouse_genomes_project 9 49577708 49580021 - MGP_NODShiLtJ_P0091742 Apoc3 protein_coding protein_coding MGP_NODShiLtJ_T0091743.1 MGP_NODShiLtJ_G0034548.1 mouse_genomes_project 9 49577826 49580060 - MGP_NODShiLtJ_P0091743 Apoc3 protein_coding protein_coding MGP_NODShiLtJ_T0091744.1 MGP_NODShiLtJ_G0034548.1 mouse_genomes_project 9 49577973 49580397 - MGP_NODShiLtJ_P0091744 Apoc3 protein_coding protein_coding MGP_NODShiLtJ_T0091745.1 MGP_NODShiLtJ_G0034548.1 mouse_genomes_project 9 49579196 49580230 - MGP_NODShiLtJ_P0091745 Apoc3 protein_coding protein_coding MGP_NODShiLtJ_T0002422.1 MGP_NODShiLtJ_G0002331.1 mouse_genomes_project 9 121795774 121798577 - TEC TEC MGP_NODShiLtJ_T0091928.1 MGP_NODShiLtJ_G0034610.1 mouse_genomes_project 9 57460663 57507837 + MGP_NODShiLtJ_P0091928 Npat protein_coding protein_coding MGP_NODShiLtJ_T0091929.1 MGP_NODShiLtJ_G0034610.1 mouse_genomes_project 9 57494389 57498066 + Npat protein_coding retained_intron MGP_NODShiLtJ_T0091952.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58356162 58506540 - MGP_NODShiLtJ_P0091952 Dmxl2 protein_coding protein_coding MGP_NODShiLtJ_T0091953.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58356168 58372087 - Dmxl2 protein_coding retained_intron MGP_NODShiLtJ_T0091954.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58356264 58441977 - MGP_NODShiLtJ_P0091954 Dmxl2 protein_coding protein_coding MGP_NODShiLtJ_T0091955.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58357115 58506410 - MGP_NODShiLtJ_P0091955 Dmxl2 protein_coding protein_coding MGP_NODShiLtJ_T0091956.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58409182 58472603 - MGP_NODShiLtJ_P0091956 Dmxl2 protein_coding protein_coding MGP_NODShiLtJ_T0091957.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58415600 58506485 - Dmxl2 protein_coding retained_intron MGP_NODShiLtJ_T0091958.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58441887 58443558 - Dmxl2 protein_coding processed_transcript MGP_NODShiLtJ_T0091959.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58471115 58506540 - Dmxl2 protein_coding retained_intron MGP_NODShiLtJ_T0091960.1 MGP_NODShiLtJ_G0034621.1 mouse_genomes_project 9 58472289 58506674 - MGP_NODShiLtJ_P0091960 Dmxl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002351.1 MGP_NODShiLtJ_G0002260.1 mouse_genomes_project 9 94669700 94670859 - TEC TEC MGP_NODShiLtJ_T0093328.1 MGP_NODShiLtJ_G0034964.1 mouse_genomes_project 9 108674266 108690673 + MGP_NODShiLtJ_P0093328 Faim protein_coding protein_coding MGP_NODShiLtJ_T0093329.1 MGP_NODShiLtJ_G0034964.1 mouse_genomes_project 9 108674347 108678610 + Faim protein_coding retained_intron MGP_NODShiLtJ_T0093330.1 MGP_NODShiLtJ_G0034964.1 mouse_genomes_project 9 108674353 108681186 + Faim protein_coding retained_intron MGP_NODShiLtJ_T0093331.1 MGP_NODShiLtJ_G0034964.1 mouse_genomes_project 9 108679778 108690340 + MGP_NODShiLtJ_P0093331 Faim protein_coding protein_coding MGP_NODShiLtJ_T0091762.1 MGP_NODShiLtJ_G0034554.1 mouse_genomes_project 9 50419506 50424863 + MGP_NODShiLtJ_P0091762 protein_coding protein_coding MGP_NODShiLtJ_T0091397.1 MGP_NODShiLtJ_G0034407.1 mouse_genomes_project 9 40885455 40889970 + MGP_NODShiLtJ_P0091397 Olfr913 protein_coding protein_coding MGP_NODShiLtJ_T0009190.1 MGP_NODShiLtJ_G0007378.1 mouse_genomes_project 9 80586741 80587340 - Gm28622 lincRNA lincRNA MGP_NODShiLtJ_T0091600.1 MGP_NODShiLtJ_G0034506.1 mouse_genomes_project 9 47612303 47616089 - MGP_NODShiLtJ_P0091600 Trappc4 protein_coding protein_coding MGP_NODShiLtJ_T0091047.1 MGP_NODShiLtJ_G0034271.1 mouse_genomes_project 9 22368438 22385615 - MGP_NODShiLtJ_P0091047 Ccdc151 protein_coding protein_coding MGP_NODShiLtJ_T0091048.1 MGP_NODShiLtJ_G0034271.1 mouse_genomes_project 9 22368438 22385615 - MGP_NODShiLtJ_P0091048 Ccdc151 protein_coding protein_coding MGP_NODShiLtJ_T0010939.1 MGP_NODShiLtJ_G0009072.1 mouse_genomes_project 9 21945977 21946110 - Mir1946b miRNA miRNA MGP_NODShiLtJ_T0090880.1 MGP_NODShiLtJ_G0034208.1 mouse_genomes_project 9 20281838 20285183 + MGP_NODShiLtJ_P0090880 Olfr868 protein_coding protein_coding MGP_NODShiLtJ_T0092054.1 MGP_NODShiLtJ_G0034655.1 mouse_genomes_project 9 61231914 61307179 + MGP_NODShiLtJ_P0092054 Ptpn9 protein_coding protein_coding MGP_NODShiLtJ_T0015904.1 MGP_NODShiLtJ_G0014012.1 mouse_genomes_project 9 13683802 13684330 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091427.1 MGP_NODShiLtJ_G0034431.1 mouse_genomes_project 9 41814042 41815005 - MGP_NODShiLtJ_P0091427 Olfr945 protein_coding protein_coding MGP_NODShiLtJ_T0099634.1 MGP_NODShiLtJ_G0038028.1 mouse_genomes_project 9 103926398 103926494 + Gm24178 snRNA snRNA MGP_NODShiLtJ_T0090835.1 MGP_NODShiLtJ_G0034175.1 mouse_genomes_project 9 17719924 17823302 - MGP_NODShiLtJ_P0090835 Naalad2 protein_coding protein_coding MGP_NODShiLtJ_T0090836.1 MGP_NODShiLtJ_G0034175.1 mouse_genomes_project 9 17720993 17808402 - MGP_NODShiLtJ_P0090836 Naalad2 protein_coding protein_coding MGP_NODShiLtJ_T0090837.1 MGP_NODShiLtJ_G0034175.1 mouse_genomes_project 9 17720994 17814125 - MGP_NODShiLtJ_P0090837 Naalad2 protein_coding protein_coding MGP_NODShiLtJ_T0090838.1 MGP_NODShiLtJ_G0034175.1 mouse_genomes_project 9 17803134 17808288 - Naalad2 protein_coding retained_intron MGP_NODShiLtJ_T0090839.1 MGP_NODShiLtJ_G0034175.1 mouse_genomes_project 9 17807423 17836373 - MGP_NODShiLtJ_P0090839 Naalad2 protein_coding protein_coding MGP_NODShiLtJ_T0090840.1 MGP_NODShiLtJ_G0034175.1 mouse_genomes_project 9 17808194 17836375 - MGP_NODShiLtJ_P0090840 Naalad2 protein_coding protein_coding MGP_NODShiLtJ_T0090841.1 MGP_NODShiLtJ_G0034175.1 mouse_genomes_project 9 17810236 17836396 - MGP_NODShiLtJ_P0090841 Naalad2 protein_coding protein_coding MGP_NODShiLtJ_T0090842.1 MGP_NODShiLtJ_G0034175.1 mouse_genomes_project 9 17810342 17836377 - Naalad2 protein_coding processed_transcript MGP_NODShiLtJ_T0009275.1 MGP_NODShiLtJ_G0007444.1 mouse_genomes_project 9 134619352 134722996 + 9530059O14Rik lincRNA lincRNA MGP_NODShiLtJ_T0009276.1 MGP_NODShiLtJ_G0007444.1 mouse_genomes_project 9 134619356 134628207 + 9530059O14Rik lincRNA lincRNA MGP_NODShiLtJ_T0009277.1 MGP_NODShiLtJ_G0007444.1 mouse_genomes_project 9 134619357 134723627 + 9530059O14Rik lincRNA lincRNA MGP_NODShiLtJ_T0090762.1 MGP_NODShiLtJ_G0034148.1 mouse_genomes_project 9 12692861 12711687 + MGP_NODShiLtJ_P0090762 Fam76b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090763.1 MGP_NODShiLtJ_G0034148.1 mouse_genomes_project 9 12692861 12711687 + MGP_NODShiLtJ_P0090763 Fam76b protein_coding protein_coding MGP_NODShiLtJ_T0090764.1 MGP_NODShiLtJ_G0034148.1 mouse_genomes_project 9 12692880 12696403 + Fam76b protein_coding retained_intron MGP_NODShiLtJ_T0090765.1 MGP_NODShiLtJ_G0034148.1 mouse_genomes_project 9 12701848 12705212 + Fam76b protein_coding retained_intron MGP_NODShiLtJ_T0091401.1 MGP_NODShiLtJ_G0034411.1 mouse_genomes_project 9 40987646 40988624 - MGP_NODShiLtJ_P0091401 Olfr918 protein_coding protein_coding MGP_NODShiLtJ_T0092115.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62155421 62202777 - MGP_NODShiLtJ_P0092115 Arid3b protein_coding protein_coding MGP_NODShiLtJ_T0092116.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62155424 62202779 - MGP_NODShiLtJ_P0092116 Arid3b protein_coding protein_coding MGP_NODShiLtJ_T0092117.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62155427 62156716 - Arid3b protein_coding processed_transcript MGP_NODShiLtJ_T0092118.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62155580 62199303 - MGP_NODShiLtJ_P0092118 Arid3b protein_coding protein_coding MGP_NODShiLtJ_T0092119.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62157228 62161290 - MGP_NODShiLtJ_P0092119 Arid3b protein_coding protein_coding MGP_NODShiLtJ_T0092120.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62157490 62202549 - MGP_NODShiLtJ_P0092120 Arid3b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092121.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62159754 62202832 - MGP_NODShiLtJ_P0092121 Arid3b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092122.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62159755 62202864 - MGP_NODShiLtJ_P0092122 Arid3b protein_coding protein_coding MGP_NODShiLtJ_T0092123.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62163218 62185692 - MGP_NODShiLtJ_P0092123 Arid3b protein_coding protein_coding MGP_NODShiLtJ_T0092124.1 MGP_NODShiLtJ_G0034677.1 mouse_genomes_project 9 62173198 62202841 - Arid3b protein_coding retained_intron MGP_NODShiLtJ_T0009222.1 MGP_NODShiLtJ_G0007404.1 mouse_genomes_project 9 101991479 102026262 - 1700034K08Rik lincRNA lincRNA MGP_NODShiLtJ_T0009223.1 MGP_NODShiLtJ_G0007404.1 mouse_genomes_project 9 101991479 102009051 - 1700034K08Rik lincRNA lincRNA MGP_NODShiLtJ_T0009224.1 MGP_NODShiLtJ_G0007404.1 mouse_genomes_project 9 101991560 102026268 - 1700034K08Rik lincRNA lincRNA MGP_NODShiLtJ_T0009225.1 MGP_NODShiLtJ_G0007404.1 mouse_genomes_project 9 102020845 102026259 - 1700034K08Rik lincRNA lincRNA MGP_NODShiLtJ_T0005472.1 MGP_NODShiLtJ_G0004613.1 mouse_genomes_project 9 117853159 117861256 - Gm17141 antisense antisense MGP_NODShiLtJ_T0092473.1 MGP_NODShiLtJ_G0034768.1 mouse_genomes_project 9 71254304 71258860 - MGP_NODShiLtJ_P0092473 Snx22 protein_coding protein_coding MGP_NODShiLtJ_T0002339.1 MGP_NODShiLtJ_G0002249.1 mouse_genomes_project 9 81762365 81763053 + TEC TEC MGP_NODShiLtJ_T0092567.1 MGP_NODShiLtJ_G0034789.1 mouse_genomes_project 9 74919903 74960386 + MGP_NODShiLtJ_P0092567 Anxa2 protein_coding protein_coding MGP_NODShiLtJ_T0092568.1 MGP_NODShiLtJ_G0034789.1 mouse_genomes_project 9 74919999 74953737 + MGP_NODShiLtJ_P0092568 Anxa2 protein_coding protein_coding MGP_NODShiLtJ_T0092569.1 MGP_NODShiLtJ_G0034789.1 mouse_genomes_project 9 74920349 74952339 + MGP_NODShiLtJ_P0092569 Anxa2 protein_coding protein_coding MGP_NODShiLtJ_T0092570.1 MGP_NODShiLtJ_G0034789.1 mouse_genomes_project 9 74946985 74960386 + Anxa2 protein_coding retained_intron MGP_NODShiLtJ_T0092571.1 MGP_NODShiLtJ_G0034789.1 mouse_genomes_project 9 74948659 74960104 + MGP_NODShiLtJ_P0092571 Anxa2 protein_coding protein_coding MGP_NODShiLtJ_T0092572.1 MGP_NODShiLtJ_G0034789.1 mouse_genomes_project 9 74955266 74956592 + Anxa2 protein_coding retained_intron MGP_NODShiLtJ_T0092702.1 MGP_NODShiLtJ_G0034813.1 mouse_genomes_project 9 78292674 78388361 + Rfx7 protein_coding processed_transcript MGP_NODShiLtJ_T0092703.1 MGP_NODShiLtJ_G0034813.1 mouse_genomes_project 9 78292743 78404720 + MGP_NODShiLtJ_P0092703 Rfx7 protein_coding protein_coding MGP_NODShiLtJ_T0092704.1 MGP_NODShiLtJ_G0034813.1 mouse_genomes_project 9 78293040 78395747 + MGP_NODShiLtJ_P0092704 Rfx7 protein_coding protein_coding MGP_NODShiLtJ_T0092705.1 MGP_NODShiLtJ_G0034813.1 mouse_genomes_project 9 78382471 78385712 + Rfx7 protein_coding retained_intron MGP_NODShiLtJ_T0092706.1 MGP_NODShiLtJ_G0034813.1 mouse_genomes_project 9 78393730 78395969 + Rfx7 protein_coding retained_intron MGP_NODShiLtJ_T0018372.1 MGP_NODShiLtJ_G0015606.1 mouse_genomes_project 9 68270292 68381694 + Gm16759 processed_transcript lincRNA MGP_NODShiLtJ_T0018373.1 MGP_NODShiLtJ_G0015606.1 mouse_genomes_project 9 68271065 68459758 + Gm16759 processed_transcript lincRNA MGP_NODShiLtJ_T0018374.1 MGP_NODShiLtJ_G0015606.1 mouse_genomes_project 9 68271072 68301619 + Gm16759 processed_transcript lincRNA MGP_NODShiLtJ_T0018375.1 MGP_NODShiLtJ_G0015606.1 mouse_genomes_project 9 68420437 68458124 + Gm16759 processed_transcript processed_transcript MGP_NODShiLtJ_T0009230.1 MGP_NODShiLtJ_G0007408.1 mouse_genomes_project 9 106581772 106603866 - Gm19325 lincRNA lincRNA MGP_NODShiLtJ_T0100916.1 MGP_NODShiLtJ_G0039310.1 mouse_genomes_project 9 111188774 111188901 + Gm24338 snoRNA snoRNA MGP_NODShiLtJ_T0094261.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119539151 119581377 + MGP_NODShiLtJ_P0094261 Pfkfb4 protein_coding protein_coding MGP_NODShiLtJ_T0094262.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119539275 119581377 + MGP_NODShiLtJ_P0094262 Pfkfb4 protein_coding protein_coding MGP_NODShiLtJ_T0094263.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119539321 119546654 + Pfkfb4 protein_coding retained_intron MGP_NODShiLtJ_T0094264.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119539376 119540286 + Pfkfb4 protein_coding retained_intron MGP_NODShiLtJ_T0094265.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119539400 119579861 + Pfkfb4 protein_coding retained_intron MGP_NODShiLtJ_T0094266.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119539400 119579861 + MGP_NODShiLtJ_P0094266 Pfkfb4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094267.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119539400 119579861 + MGP_NODShiLtJ_P0094267 Pfkfb4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094268.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119546272 119559161 + Pfkfb4 protein_coding processed_transcript MGP_NODShiLtJ_T0094269.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119559690 119578044 + MGP_NODShiLtJ_P0094269 Pfkfb4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094270.1 MGP_NODShiLtJ_G0035119.1 mouse_genomes_project 9 119565953 119581346 + Pfkfb4 protein_coding processed_transcript MGP_NODShiLtJ_T0090878.1 MGP_NODShiLtJ_G0034206.1 mouse_genomes_project 9 20202818 20203895 - MGP_NODShiLtJ_P0090878 Olfr866 protein_coding protein_coding MGP_NODShiLtJ_T0092921.1 MGP_NODShiLtJ_G0034874.1 mouse_genomes_project 9 86723905 86894281 - MGP_NODShiLtJ_P0092921 Filip1 protein_coding protein_coding MGP_NODShiLtJ_T0092922.1 MGP_NODShiLtJ_G0034874.1 mouse_genomes_project 9 86723911 86742275 - Filip1 protein_coding processed_transcript MGP_NODShiLtJ_T0092923.1 MGP_NODShiLtJ_G0034874.1 mouse_genomes_project 9 86729515 86877437 - MGP_NODShiLtJ_P0092923 Filip1 protein_coding protein_coding MGP_NODShiLtJ_T0005429.1 MGP_NODShiLtJ_G0004584.1 mouse_genomes_project 9 88923993 89064481 - antisense antisense MGP_NODShiLtJ_T0093440.1 MGP_NODShiLtJ_G0034988.1 mouse_genomes_project 9 112669722 112677870 + MGP_NODShiLtJ_P0093440 Anapc13 protein_coding protein_coding MGP_NODShiLtJ_T0093441.1 MGP_NODShiLtJ_G0034988.1 mouse_genomes_project 9 112669750 112677695 + MGP_NODShiLtJ_P0093441 Anapc13 protein_coding protein_coding MGP_NODShiLtJ_T0093442.1 MGP_NODShiLtJ_G0034988.1 mouse_genomes_project 9 112670089 112677687 + MGP_NODShiLtJ_P0093442 Anapc13 protein_coding protein_coding MGP_NODShiLtJ_T0093443.1 MGP_NODShiLtJ_G0034988.1 mouse_genomes_project 9 112670105 112677687 + MGP_NODShiLtJ_P0093443 Anapc13 protein_coding protein_coding MGP_NODShiLtJ_T0093444.1 MGP_NODShiLtJ_G0034988.1 mouse_genomes_project 9 112671940 112673156 + Anapc13 protein_coding retained_intron MGP_NODShiLtJ_T0015928.1 MGP_NODShiLtJ_G0014036.1 mouse_genomes_project 9 52650683 52651376 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091951.1 MGP_NODShiLtJ_G0034620.1 mouse_genomes_project 9 58275261 58331461 + MGP_NODShiLtJ_P0091951 Gldn protein_coding protein_coding MGP_NODShiLtJ_T0010982.1 MGP_NODShiLtJ_G0009115.1 mouse_genomes_project 9 116449463 116449553 + Mir135a-1 miRNA miRNA MGP_NODShiLtJ_T0016032.1 MGP_NODShiLtJ_G0014140.1 mouse_genomes_project 9 112597936 112598137 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094047.1 MGP_NODShiLtJ_G0035086.1 mouse_genomes_project 9 118589970 118693049 - MGP_NODShiLtJ_P0094047 Bsn protein_coding protein_coding MGP_NODShiLtJ_T0094048.1 MGP_NODShiLtJ_G0035086.1 mouse_genomes_project 9 118589971 118604372 - MGP_NODShiLtJ_P0094048 Bsn protein_coding protein_coding MGP_NODShiLtJ_T0100924.1 MGP_NODShiLtJ_G0039318.1 mouse_genomes_project 9 120955689 120955827 - Gm23377 snoRNA snoRNA MGP_NODShiLtJ_T0010992.1 MGP_NODShiLtJ_G0009125.1 mouse_genomes_project 9 120683479 120683547 + Mir7089 miRNA miRNA MGP_NODShiLtJ_T0093376.1 MGP_NODShiLtJ_G0034975.1 mouse_genomes_project 9 109437066 109460476 - MGP_NODShiLtJ_P0093376 Cldn18 protein_coding protein_coding MGP_NODShiLtJ_T0093377.1 MGP_NODShiLtJ_G0034975.1 mouse_genomes_project 9 109439425 109469118 - MGP_NODShiLtJ_P0093377 Cldn18 protein_coding protein_coding MGP_NODShiLtJ_T0093378.1 MGP_NODShiLtJ_G0034975.1 mouse_genomes_project 9 109439787 109460422 - MGP_NODShiLtJ_P0093378 Cldn18 protein_coding protein_coding MGP_NODShiLtJ_T0093379.1 MGP_NODShiLtJ_G0034975.1 mouse_genomes_project 9 109440327 109469118 - MGP_NODShiLtJ_P0093379 Cldn18 protein_coding protein_coding MGP_NODShiLtJ_T0009151.1 MGP_NODShiLtJ_G0007347.1 mouse_genomes_project 9 44162029 44185134 + lincRNA lincRNA MGP_NODShiLtJ_T0016000.1 MGP_NODShiLtJ_G0014108.1 mouse_genomes_project 9 99841996 99842438 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092103.1 MGP_NODShiLtJ_G0034668.1 mouse_genomes_project 9 61895470 61926548 + MGP_NODShiLtJ_P0092103 Scamp2 protein_coding protein_coding MGP_NODShiLtJ_T0092810.1 MGP_NODShiLtJ_G0034841.1 mouse_genomes_project 9 81736663 81781352 - MGP_NODShiLtJ_P0092810 Scg3 protein_coding protein_coding MGP_NODShiLtJ_T0092811.1 MGP_NODShiLtJ_G0034841.1 mouse_genomes_project 9 81737225 81781440 - MGP_NODShiLtJ_P0092811 Scg3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092551.1 MGP_NODShiLtJ_G0034787.1 mouse_genomes_project 9 74068466 74082030 + Rora protein_coding processed_transcript MGP_NODShiLtJ_T0092552.1 MGP_NODShiLtJ_G0034787.1 mouse_genomes_project 9 74068466 74851367 + MGP_NODShiLtJ_P0092552 Rora protein_coding protein_coding MGP_NODShiLtJ_T0092553.1 MGP_NODShiLtJ_G0034787.1 mouse_genomes_project 9 74068571 74827305 + MGP_NODShiLtJ_P0092553 Rora protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092554.1 MGP_NODShiLtJ_G0034787.1 mouse_genomes_project 9 74069983 74081244 + Rora protein_coding processed_transcript MGP_NODShiLtJ_T0092555.1 MGP_NODShiLtJ_G0034787.1 mouse_genomes_project 9 74650390 74706750 + Rora protein_coding processed_transcript MGP_NODShiLtJ_T0092556.1 MGP_NODShiLtJ_G0034787.1 mouse_genomes_project 9 74748239 74842673 + MGP_NODShiLtJ_P0092556 Rora protein_coding protein_coding MGP_NODShiLtJ_T0009217.1 MGP_NODShiLtJ_G0007400.1 mouse_genomes_project 9 100048709 100276864 + Gm29478 lincRNA lincRNA MGP_NODShiLtJ_T0091388.1 MGP_NODShiLtJ_G0034398.1 mouse_genomes_project 9 40619778 40625415 + MGP_NODShiLtJ_P0091388 Olfr147 protein_coding protein_coding MGP_NODShiLtJ_T0093509.1 MGP_NODShiLtJ_G0035002.1 mouse_genomes_project 9 114118978 114158434 + Nphp3 protein_coding retained_intron MGP_NODShiLtJ_T0093510.1 MGP_NODShiLtJ_G0035002.1 mouse_genomes_project 9 114118980 114162402 + MGP_NODShiLtJ_P0093510 Nphp3 protein_coding protein_coding MGP_NODShiLtJ_T0093511.1 MGP_NODShiLtJ_G0035002.1 mouse_genomes_project 9 114119088 114161693 + MGP_NODShiLtJ_P0093511 Nphp3 protein_coding protein_coding MGP_NODShiLtJ_T0093512.1 MGP_NODShiLtJ_G0035002.1 mouse_genomes_project 9 114119088 114291166 + MGP_NODShiLtJ_P0093512 Nphp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093513.1 MGP_NODShiLtJ_G0035002.1 mouse_genomes_project 9 114119192 114135099 + Nphp3 protein_coding retained_intron MGP_NODShiLtJ_T0093514.1 MGP_NODShiLtJ_G0035002.1 mouse_genomes_project 9 114119201 114160907 + MGP_NODShiLtJ_P0093514 Nphp3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093515.1 MGP_NODShiLtJ_G0035002.1 mouse_genomes_project 9 114150565 114153120 + Nphp3 protein_coding retained_intron MGP_NODShiLtJ_T0093516.1 MGP_NODShiLtJ_G0035002.1 mouse_genomes_project 9 114154545 114157239 + MGP_NODShiLtJ_P0093516 Nphp3 protein_coding protein_coding MGP_NODShiLtJ_T0099593.1 MGP_NODShiLtJ_G0037987.1 mouse_genomes_project 9 37122090 37122252 + Gm25630 snRNA snRNA MGP_NODShiLtJ_T0101209.1 MGP_NODShiLtJ_G0039512.1 mouse_genomes_project 9 117711479 117712362 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101210.1 MGP_NODShiLtJ_G0039512.1 mouse_genomes_project 9 117712048 117716170 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0091166.1 MGP_NODShiLtJ_G0034316.1 mouse_genomes_project 9 32442271 32506763 - MGP_NODShiLtJ_P0091166 Aplp2 protein_coding protein_coding MGP_NODShiLtJ_T0091167.1 MGP_NODShiLtJ_G0034316.1 mouse_genomes_project 9 32442271 32506763 - MGP_NODShiLtJ_P0091167 Aplp2 protein_coding protein_coding MGP_NODShiLtJ_T0094896.1 MGP_NODShiLtJ_G0035279.1 mouse_genomes_project 9 135740021 135788298 - MGP_NODShiLtJ_P0094896 Slc6a20a protein_coding protein_coding MGP_NODShiLtJ_T0094897.1 MGP_NODShiLtJ_G0035279.1 mouse_genomes_project 9 135740895 135788219 - MGP_NODShiLtJ_P0094897 Slc6a20a protein_coding protein_coding MGP_NODShiLtJ_T0094898.1 MGP_NODShiLtJ_G0035279.1 mouse_genomes_project 9 135763813 135788195 - MGP_NODShiLtJ_P0094898 Slc6a20a protein_coding protein_coding MGP_NODShiLtJ_T0094085.1 MGP_NODShiLtJ_G0035094.1 mouse_genomes_project 9 118923372 118941495 + MGP_NODShiLtJ_P0094085 1700102P08Rik protein_coding protein_coding MGP_NODShiLtJ_T0094086.1 MGP_NODShiLtJ_G0035094.1 mouse_genomes_project 9 118923401 118928332 + MGP_NODShiLtJ_P0094086 1700102P08Rik protein_coding protein_coding MGP_NODShiLtJ_T0092040.1 MGP_NODShiLtJ_G0034646.1 mouse_genomes_project 9 60301402 60326812 - MGP_NODShiLtJ_P0092040 Tspan3 protein_coding protein_coding MGP_NODShiLtJ_T0091461.1 MGP_NODShiLtJ_G0034459.1 mouse_genomes_project 9 42929551 42930496 - MGP_NODShiLtJ_P0091461 Olfr984 protein_coding protein_coding MGP_NODShiLtJ_T0092993.1 MGP_NODShiLtJ_G0034884.1 mouse_genomes_project 9 91026693 91125009 + MGP_NODShiLtJ_P0092993 Sh3bgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0092994.1 MGP_NODShiLtJ_G0034884.1 mouse_genomes_project 9 91026695 91027378 + Sh3bgrl2 protein_coding retained_intron MGP_NODShiLtJ_T0092995.1 MGP_NODShiLtJ_G0034884.1 mouse_genomes_project 9 91026716 91124508 + MGP_NODShiLtJ_P0092995 Sh3bgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0092996.1 MGP_NODShiLtJ_G0034884.1 mouse_genomes_project 9 91026825 91084225 + MGP_NODShiLtJ_P0092996 Sh3bgrl2 protein_coding protein_coding MGP_NODShiLtJ_T0093887.1 MGP_NODShiLtJ_G0035066.1 mouse_genomes_project 9 118133836 118138864 - MGP_NODShiLtJ_P0093887 Gnat1 protein_coding protein_coding MGP_NODShiLtJ_T0093888.1 MGP_NODShiLtJ_G0035066.1 mouse_genomes_project 9 118133839 118138786 - Gnat1 protein_coding retained_intron MGP_NODShiLtJ_T0093889.1 MGP_NODShiLtJ_G0035066.1 mouse_genomes_project 9 118134659 118135804 - Gnat1 protein_coding retained_intron MGP_NODShiLtJ_T0093890.1 MGP_NODShiLtJ_G0035066.1 mouse_genomes_project 9 118135607 118137576 - Gnat1 protein_coding processed_transcript MGP_NODShiLtJ_T0093891.1 MGP_NODShiLtJ_G0035066.1 mouse_genomes_project 9 118136293 118138766 - Gnat1 protein_coding retained_intron MGP_NODShiLtJ_T0093465.1 MGP_NODShiLtJ_G0034992.1 mouse_genomes_project 9 113059145 113091132 + Slco2a1 protein_coding processed_transcript MGP_NODShiLtJ_T0093466.1 MGP_NODShiLtJ_G0034992.1 mouse_genomes_project 9 113078364 113167246 + MGP_NODShiLtJ_P0093466 Slco2a1 protein_coding protein_coding MGP_NODShiLtJ_T0093467.1 MGP_NODShiLtJ_G0034992.1 mouse_genomes_project 9 113078516 113082272 + Slco2a1 protein_coding retained_intron MGP_NODShiLtJ_T0093468.1 MGP_NODShiLtJ_G0034992.1 mouse_genomes_project 9 113078861 113172710 + MGP_NODShiLtJ_P0093468 Slco2a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092806.1 MGP_NODShiLtJ_G0034839.1 mouse_genomes_project 9 81651433 81702368 - MGP_NODShiLtJ_P0092806 Tmod2 protein_coding protein_coding MGP_NODShiLtJ_T0092807.1 MGP_NODShiLtJ_G0034839.1 mouse_genomes_project 9 81651433 81689859 - MGP_NODShiLtJ_P0092807 Tmod2 protein_coding protein_coding MGP_NODShiLtJ_T0092808.1 MGP_NODShiLtJ_G0034839.1 mouse_genomes_project 9 81659518 81688377 - MGP_NODShiLtJ_P0092808 Tmod2 protein_coding protein_coding MGP_NODShiLtJ_T0009210.1 MGP_NODShiLtJ_G0007395.1 mouse_genomes_project 9 98113811 98116997 + 1700017I07Rik lincRNA lincRNA MGP_NODShiLtJ_T0016029.1 MGP_NODShiLtJ_G0014137.1 mouse_genomes_project 9 111402059 111402423 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092320.1 MGP_NODShiLtJ_G0034725.1 mouse_genomes_project 9 68004023 68014823 - MGP_NODShiLtJ_P0092320 Skor1 protein_coding protein_coding MGP_NODShiLtJ_T0092321.1 MGP_NODShiLtJ_G0034725.1 mouse_genomes_project 9 68004023 68012873 - MGP_NODShiLtJ_P0092321 Skor1 protein_coding protein_coding MGP_NODShiLtJ_T0092322.1 MGP_NODShiLtJ_G0034725.1 mouse_genomes_project 9 68004029 68012842 - MGP_NODShiLtJ_P0092322 Skor1 protein_coding protein_coding MGP_NODShiLtJ_T0094613.1 MGP_NODShiLtJ_G0035181.1 mouse_genomes_project 9 125308387 125384879 + MGP_NODShiLtJ_P0094613 4921528I07Rik protein_coding protein_coding MGP_NODShiLtJ_T0098104.1 MGP_NODShiLtJ_G0036516.1 mouse_genomes_project 9 37152478 37152586 - Gm24188 rRNA rRNA MGP_NODShiLtJ_T0090982.1 MGP_NODShiLtJ_G0034247.1 mouse_genomes_project 9 21558991 21561764 - MGP_NODShiLtJ_P0090982 Cdkn2d protein_coding protein_coding MGP_NODShiLtJ_T0091361.1 MGP_NODShiLtJ_G0034373.1 mouse_genomes_project 9 39677806 39687125 - MGP_NODShiLtJ_P0091361 Panx3 protein_coding protein_coding MGP_NODShiLtJ_T0091362.1 MGP_NODShiLtJ_G0034373.1 mouse_genomes_project 9 39682124 39687076 - MGP_NODShiLtJ_P0091362 Panx3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009144.1 MGP_NODShiLtJ_G0007343.1 mouse_genomes_project 9 37718112 37727384 - Gm27187 lincRNA lincRNA MGP_NODShiLtJ_T0009145.1 MGP_NODShiLtJ_G0007343.1 mouse_genomes_project 9 37718159 37727498 - Gm27187 lincRNA lincRNA MGP_NODShiLtJ_T0011629.1 MGP_NODShiLtJ_G0009762.1 mouse_genomes_project 9 83151991 83152284 - Gm23791 misc_RNA misc_RNA MGP_NODShiLtJ_T0091448.1 MGP_NODShiLtJ_G0034446.1 mouse_genomes_project 9 42491486 42492431 - MGP_NODShiLtJ_P0091448 Olfr968 protein_coding protein_coding MGP_NODShiLtJ_T0094678.1 MGP_NODShiLtJ_G0035206.1 mouse_genomes_project 9 130669377 130794789 + MGP_NODShiLtJ_P0094678 Ctdspl protein_coding protein_coding MGP_NODShiLtJ_T0094679.1 MGP_NODShiLtJ_G0035206.1 mouse_genomes_project 9 130670977 130791447 + MGP_NODShiLtJ_P0094679 Ctdspl protein_coding protein_coding MGP_NODShiLtJ_T0094680.1 MGP_NODShiLtJ_G0035206.1 mouse_genomes_project 9 130673981 130782249 + Ctdspl protein_coding processed_transcript MGP_NODShiLtJ_T0094681.1 MGP_NODShiLtJ_G0035206.1 mouse_genomes_project 9 130781621 130791707 + Ctdspl protein_coding retained_intron MGP_NODShiLtJ_T0093716.1 MGP_NODShiLtJ_G0035039.1 mouse_genomes_project 9 116956631 116957725 + MGP_NODShiLtJ_P0093716 Iqcf6 protein_coding protein_coding MGP_NODShiLtJ_T0100886.1 MGP_NODShiLtJ_G0039280.1 mouse_genomes_project 9 49947272 49947402 + Gm22659 snoRNA snoRNA MGP_NODShiLtJ_T0002416.1 MGP_NODShiLtJ_G0002325.1 mouse_genomes_project 9 120409486 120411069 + TEC TEC MGP_NODShiLtJ_T0002301.1 MGP_NODShiLtJ_G0002211.1 mouse_genomes_project 9 33906235 33909276 - TEC TEC MGP_NODShiLtJ_T0098471.1 MGP_NODShiLtJ_G0036870.1 mouse_genomes_project 9 119145760 119146242 - Gm38163 sense_intronic sense_intronic MGP_NODShiLtJ_T0092717.1 MGP_NODShiLtJ_G0034815.1 mouse_genomes_project 9 78618734 78742332 + MGP_NODShiLtJ_P0092717 Prtg protein_coding protein_coding MGP_NODShiLtJ_T0092718.1 MGP_NODShiLtJ_G0034815.1 mouse_genomes_project 9 78735667 78737345 + Prtg protein_coding retained_intron MGP_NODShiLtJ_T0015954.1 MGP_NODShiLtJ_G0014062.1 mouse_genomes_project 9 80372577 80373055 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005431.1 MGP_NODShiLtJ_G0004586.1 mouse_genomes_project 9 94682107 94687875 + A330041J22Rik antisense antisense MGP_NODShiLtJ_T0002332.1 MGP_NODShiLtJ_G0002242.1 mouse_genomes_project 9 78683303 78685199 + TEC TEC MGP_NODShiLtJ_T0093956.1 MGP_NODShiLtJ_G0035074.1 mouse_genomes_project 9 118428605 118450836 + Traip protein_coding retained_intron MGP_NODShiLtJ_T0093957.1 MGP_NODShiLtJ_G0035074.1 mouse_genomes_project 9 118429425 118451581 + MGP_NODShiLtJ_P0093957 Traip protein_coding protein_coding MGP_NODShiLtJ_T0093958.1 MGP_NODShiLtJ_G0035074.1 mouse_genomes_project 9 118429436 118437805 + Traip protein_coding processed_transcript MGP_NODShiLtJ_T0093959.1 MGP_NODShiLtJ_G0035074.1 mouse_genomes_project 9 118429457 118440363 + MGP_NODShiLtJ_P0093959 Traip protein_coding protein_coding MGP_NODShiLtJ_T0093960.1 MGP_NODShiLtJ_G0035074.1 mouse_genomes_project 9 118439708 118440979 + Traip protein_coding processed_transcript MGP_NODShiLtJ_T0093961.1 MGP_NODShiLtJ_G0035074.1 mouse_genomes_project 9 118441489 118447955 + Traip protein_coding retained_intron MGP_NODShiLtJ_T0093962.1 MGP_NODShiLtJ_G0035074.1 mouse_genomes_project 9 118441550 118448052 + Traip protein_coding retained_intron MGP_NODShiLtJ_T0015953.1 MGP_NODShiLtJ_G0014061.1 mouse_genomes_project 9 79602480 79602640 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091414.1 MGP_NODShiLtJ_G0034418.1 mouse_genomes_project 9 41200315 41201242 + MGP_NODShiLtJ_P0091414 Olfr924 protein_coding protein_coding MGP_NODShiLtJ_T0091269.1 MGP_NODShiLtJ_G0034342.1 mouse_genomes_project 9 37435164 37436366 + MGP_NODShiLtJ_P0091269 Gm17677 protein_coding protein_coding MGP_NODShiLtJ_T0009267.1 MGP_NODShiLtJ_G0007436.1 mouse_genomes_project 9 129537863 129545922 + Gm26614 lincRNA lincRNA MGP_NODShiLtJ_T0016017.1 MGP_NODShiLtJ_G0014125.1 mouse_genomes_project 9 106576289 106576590 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091755.1 MGP_NODShiLtJ_G0034552.1 mouse_genomes_project 9 49629006 49641520 + Bud13 protein_coding retained_intron MGP_NODShiLtJ_T0091756.1 MGP_NODShiLtJ_G0034552.1 mouse_genomes_project 9 49629006 49646182 + MGP_NODShiLtJ_P0091756 Bud13 protein_coding protein_coding MGP_NODShiLtJ_T0091757.1 MGP_NODShiLtJ_G0034552.1 mouse_genomes_project 9 49635642 49646182 + MGP_NODShiLtJ_P0091757 Bud13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091758.1 MGP_NODShiLtJ_G0034552.1 mouse_genomes_project 9 49635664 49637963 + Bud13 protein_coding retained_intron MGP_NODShiLtJ_T0015966.1 MGP_NODShiLtJ_G0014074.1 mouse_genomes_project 9 83527521 83529723 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091089.1 MGP_NODShiLtJ_G0034290.1 mouse_genomes_project 9 24695493 24904102 + MGP_NODShiLtJ_P0091089 Npsr1 protein_coding protein_coding MGP_NODShiLtJ_T0091090.1 MGP_NODShiLtJ_G0034290.1 mouse_genomes_project 9 24695515 24936171 + MGP_NODShiLtJ_P0091090 Npsr1 protein_coding protein_coding MGP_NODShiLtJ_T0091091.1 MGP_NODShiLtJ_G0034290.1 mouse_genomes_project 9 24874388 24933586 + MGP_NODShiLtJ_P0091091 Npsr1 protein_coding protein_coding MGP_NODShiLtJ_T0091092.1 MGP_NODShiLtJ_G0034290.1 mouse_genomes_project 9 24920288 24934644 + Npsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0016003.1 MGP_NODShiLtJ_G0014111.1 mouse_genomes_project 9 101593421 101593887 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092457.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71093648 71229299 + MGP_NODShiLtJ_P0092457 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092458.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71093698 71189249 + Csnk1g1 protein_coding retained_intron MGP_NODShiLtJ_T0092459.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71093701 71232407 + MGP_NODShiLtJ_P0092459 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092460.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71093710 71232413 + MGP_NODShiLtJ_P0092460 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092461.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71093744 71142976 + MGP_NODShiLtJ_P0092461 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092462.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71093754 71162591 + Csnk1g1 protein_coding retained_intron MGP_NODShiLtJ_T0092463.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71093812 71227832 + MGP_NODShiLtJ_P0092463 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092464.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71094160 71230468 + MGP_NODShiLtJ_P0092464 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092465.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71111856 71218266 + MGP_NODShiLtJ_P0092465 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092466.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71142664 71232403 + MGP_NODShiLtJ_P0092466 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092467.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71192779 71219741 + MGP_NODShiLtJ_P0092467 Csnk1g1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092468.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71195090 71198037 + Csnk1g1 protein_coding retained_intron MGP_NODShiLtJ_T0092469.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71195114 71227121 + MGP_NODShiLtJ_P0092469 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092470.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71195457 71218266 + MGP_NODShiLtJ_P0092470 Csnk1g1 protein_coding protein_coding MGP_NODShiLtJ_T0092471.1 MGP_NODShiLtJ_G0034766.1 mouse_genomes_project 9 71223410 71227139 + Csnk1g1 protein_coding retained_intron MGP_NODShiLtJ_T0094189.1 MGP_NODShiLtJ_G0035108.1 mouse_genomes_project 9 119166635 119170280 - Arih2 protein_coding retained_intron MGP_NODShiLtJ_T0094190.1 MGP_NODShiLtJ_G0035108.1 mouse_genomes_project 9 119168496 119173416 - MGP_NODShiLtJ_P0094190 Arih2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094191.1 MGP_NODShiLtJ_G0035108.1 mouse_genomes_project 9 119168631 119171025 - Arih2 protein_coding retained_intron MGP_NODShiLtJ_T0094192.1 MGP_NODShiLtJ_G0035108.1 mouse_genomes_project 9 119168770 119196323 - MGP_NODShiLtJ_P0094192 Arih2 protein_coding protein_coding MGP_NODShiLtJ_T0094193.1 MGP_NODShiLtJ_G0035108.1 mouse_genomes_project 9 119168962 119171628 - Arih2 protein_coding retained_intron MGP_NODShiLtJ_T0094194.1 MGP_NODShiLtJ_G0035108.1 mouse_genomes_project 9 119174628 119219638 - MGP_NODShiLtJ_P0094194 Arih2 protein_coding protein_coding MGP_NODShiLtJ_T0094195.1 MGP_NODShiLtJ_G0035108.1 mouse_genomes_project 9 119179304 119195669 - Arih2 protein_coding retained_intron MGP_NODShiLtJ_T0091120.1 MGP_NODShiLtJ_G0034300.1 mouse_genomes_project 9 27763442 27816860 - MGP_NODShiLtJ_P0091120 Glb1l3 protein_coding protein_coding MGP_NODShiLtJ_T0094820.1 MGP_NODShiLtJ_G0035248.1 mouse_genomes_project 9 133782042 133788316 + MGP_NODShiLtJ_P0094820 Klhl40 protein_coding protein_coding MGP_NODShiLtJ_T0093951.1 MGP_NODShiLtJ_G0035073.1 mouse_genomes_project 9 118414150 118428161 + MGP_NODShiLtJ_P0093951 Camkv protein_coding protein_coding MGP_NODShiLtJ_T0093952.1 MGP_NODShiLtJ_G0035073.1 mouse_genomes_project 9 118414374 118428147 + Camkv protein_coding retained_intron MGP_NODShiLtJ_T0093953.1 MGP_NODShiLtJ_G0035073.1 mouse_genomes_project 9 118414384 118424665 + MGP_NODShiLtJ_P0093953 Camkv protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093954.1 MGP_NODShiLtJ_G0035073.1 mouse_genomes_project 9 118415776 118424014 + MGP_NODShiLtJ_P0093954 Camkv protein_coding protein_coding MGP_NODShiLtJ_T0093955.1 MGP_NODShiLtJ_G0035073.1 mouse_genomes_project 9 118423735 118428153 + MGP_NODShiLtJ_P0093955 Camkv protein_coding protein_coding MGP_NODShiLtJ_T0092227.1 MGP_NODShiLtJ_G0034704.1 mouse_genomes_project 9 64307468 64326810 - MGP_NODShiLtJ_P0092227 Senp8 protein_coding protein_coding MGP_NODShiLtJ_T0092228.1 MGP_NODShiLtJ_G0034704.1 mouse_genomes_project 9 64307468 64326810 - MGP_NODShiLtJ_P0092228 Senp8 protein_coding protein_coding MGP_NODShiLtJ_T0101211.1 MGP_NODShiLtJ_G0039513.1 mouse_genomes_project 9 120607063 120612255 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101212.1 MGP_NODShiLtJ_G0039513.1 mouse_genomes_project 9 120609296 120612259 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101213.1 MGP_NODShiLtJ_G0039513.1 mouse_genomes_project 9 120609724 120610818 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0094485.1 MGP_NODShiLtJ_G0035158.1 mouse_genomes_project 9 121761203 121767783 + MGP_NODShiLtJ_P0094485 Prss50 protein_coding protein_coding MGP_NODShiLtJ_T0094486.1 MGP_NODShiLtJ_G0035158.1 mouse_genomes_project 9 121764513 121767782 + MGP_NODShiLtJ_P0094486 Prss50 protein_coding protein_coding MGP_NODShiLtJ_T0016045.1 MGP_NODShiLtJ_G0014153.1 mouse_genomes_project 9 120781992 120783047 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091838.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54348166 54417312 - MGP_NODShiLtJ_P0091838 Dixdc1 protein_coding protein_coding MGP_NODShiLtJ_T0091839.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54348170 54387777 - Dixdc1 protein_coding retained_intron MGP_NODShiLtJ_T0091840.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54348170 54417404 - MGP_NODShiLtJ_P0091840 Dixdc1 protein_coding protein_coding MGP_NODShiLtJ_T0091841.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54351609 54385364 - Dixdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0091842.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54351609 54387186 - MGP_NODShiLtJ_P0091842 Dixdc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091843.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54351609 54428886 - MGP_NODShiLtJ_P0091843 Dixdc1 protein_coding protein_coding MGP_NODShiLtJ_T0091844.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54351673 54372318 - Dixdc1 protein_coding retained_intron MGP_NODShiLtJ_T0091845.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54363369 54382436 - MGP_NODShiLtJ_P0091845 Dixdc1 protein_coding protein_coding MGP_NODShiLtJ_T0091846.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54377838 54387852 - Dixdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0091847.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54382104 54387241 - Dixdc1 protein_coding retained_intron MGP_NODShiLtJ_T0091848.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54382282 54386377 - Dixdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0091849.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54398989 54428816 - MGP_NODShiLtJ_P0091849 Dixdc1 protein_coding protein_coding MGP_NODShiLtJ_T0091850.1 MGP_NODShiLtJ_G0034584.1 mouse_genomes_project 9 54399492 54417275 - MGP_NODShiLtJ_P0091850 Dixdc1 protein_coding protein_coding MGP_NODShiLtJ_T0009162.1 MGP_NODShiLtJ_G0007355.1 mouse_genomes_project 9 52654352 52658476 - 1700042D02Rik lincRNA lincRNA MGP_NODShiLtJ_T0092416.1 MGP_NODShiLtJ_G0034754.1 mouse_genomes_project 9 70467502 70484696 + MGP_NODShiLtJ_P0092416 Rasl12 protein_coding protein_coding MGP_NODShiLtJ_T0092417.1 MGP_NODShiLtJ_G0034754.1 mouse_genomes_project 9 70467502 70481637 + MGP_NODShiLtJ_P0092417 Rasl12 protein_coding protein_coding MGP_NODShiLtJ_T0016024.1 MGP_NODShiLtJ_G0014132.1 mouse_genomes_project 9 110255023 110255288 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093094.1 MGP_NODShiLtJ_G0034905.1 mouse_genomes_project 9 96536508 96591923 - MGP_NODShiLtJ_P0093094 Gm20537 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093096.1 MGP_NODShiLtJ_G0034905.1 mouse_genomes_project 9 96552849 96591808 - MGP_NODShiLtJ_P0093096 Gm20537 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091424.1 MGP_NODShiLtJ_G0034428.1 mouse_genomes_project 9 41669244 41702714 + MGP_NODShiLtJ_P0091424 Olfr943 protein_coding protein_coding MGP_NODShiLtJ_T0002423.1 MGP_NODShiLtJ_G0002332.1 mouse_genomes_project 9 121980277 121980690 - TEC TEC MGP_NODShiLtJ_T0091157.1 MGP_NODShiLtJ_G0034312.1 mouse_genomes_project 9 32174469 32201842 - MGP_NODShiLtJ_P0091157 Adamts15 protein_coding protein_coding MGP_NODShiLtJ_T0010973.1 MGP_NODShiLtJ_G0009106.1 mouse_genomes_project 9 76383852 76383934 - Gm25149 miRNA miRNA MGP_NODShiLtJ_T0093766.1 MGP_NODShiLtJ_G0035048.1 mouse_genomes_project 9 117715004 117720937 + MGP_NODShiLtJ_P0093766 Cish protein_coding protein_coding MGP_NODShiLtJ_T0093767.1 MGP_NODShiLtJ_G0035048.1 mouse_genomes_project 9 117715687 117721735 + MGP_NODShiLtJ_P0093767 Cish protein_coding protein_coding MGP_NODShiLtJ_T0093768.1 MGP_NODShiLtJ_G0035048.1 mouse_genomes_project 9 117715884 117720893 + Cish protein_coding processed_transcript MGP_NODShiLtJ_T0093769.1 MGP_NODShiLtJ_G0035048.1 mouse_genomes_project 9 117715889 117719501 + MGP_NODShiLtJ_P0093769 Cish protein_coding protein_coding MGP_NODShiLtJ_T0093770.1 MGP_NODShiLtJ_G0035048.1 mouse_genomes_project 9 117718105 117719408 + Cish protein_coding processed_transcript MGP_NODShiLtJ_T0091182.1 MGP_NODShiLtJ_G0034319.1 mouse_genomes_project 9 32736597 32778199 - MGP_NODShiLtJ_P0091182 Tmem45b protein_coding protein_coding MGP_NODShiLtJ_T0094859.1 MGP_NODShiLtJ_G0035265.1 mouse_genomes_project 9 134983329 134991282 + MGP_NODShiLtJ_P0094859 Zfp105 protein_coding protein_coding MGP_NODShiLtJ_T0094860.1 MGP_NODShiLtJ_G0035265.1 mouse_genomes_project 9 134983356 134989932 + MGP_NODShiLtJ_P0094860 Zfp105 protein_coding protein_coding MGP_NODShiLtJ_T0094641.1 MGP_NODShiLtJ_G0035197.1 mouse_genomes_project 9 127448833 127601131 + MGP_NODShiLtJ_P0094641 Gadl1 protein_coding protein_coding MGP_NODShiLtJ_T0091949.1 MGP_NODShiLtJ_G0034618.1 mouse_genomes_project 9 58001973 58050641 - MGP_NODShiLtJ_P0091949 Tnfaip8l3 protein_coding protein_coding MGP_NODShiLtJ_T0091390.1 MGP_NODShiLtJ_G0034400.1 mouse_genomes_project 9 40689431 40690487 + MGP_NODShiLtJ_P0091390 Olfr902 protein_coding protein_coding MGP_NODShiLtJ_T0015906.1 MGP_NODShiLtJ_G0014014.1 mouse_genomes_project 9 21829459 21829818 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091417.1 MGP_NODShiLtJ_G0034421.1 mouse_genomes_project 9 41291872 41292799 + MGP_NODShiLtJ_P0091417 protein_coding protein_coding MGP_NODShiLtJ_T0016036.1 MGP_NODShiLtJ_G0014144.1 mouse_genomes_project 9 114481711 114482426 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091073.1 MGP_NODShiLtJ_G0034285.1 mouse_genomes_project 9 22869138 22904370 + MGP_NODShiLtJ_P0091073 9530077C05Rik protein_coding protein_coding MGP_NODShiLtJ_T0091679.1 MGP_NODShiLtJ_G0034532.1 mouse_genomes_project 9 48467584 48502347 - MGP_NODShiLtJ_P0091679 Tmprss4 protein_coding protein_coding MGP_NODShiLtJ_T0091680.1 MGP_NODShiLtJ_G0034532.1 mouse_genomes_project 9 48467585 48502345 - MGP_NODShiLtJ_P0091680 Tmprss4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091681.1 MGP_NODShiLtJ_G0034532.1 mouse_genomes_project 9 48468163 48502315 - Tmprss4 protein_coding processed_transcript MGP_NODShiLtJ_T0091682.1 MGP_NODShiLtJ_G0034532.1 mouse_genomes_project 9 48468163 48502231 - MGP_NODShiLtJ_P0091682 Tmprss4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091683.1 MGP_NODShiLtJ_G0034532.1 mouse_genomes_project 9 48469655 48477756 - Tmprss4 protein_coding retained_intron MGP_NODShiLtJ_T0094888.1 MGP_NODShiLtJ_G0035275.1 mouse_genomes_project 9 135454862 135553853 + MGP_NODShiLtJ_P0094888 Lars2 protein_coding protein_coding MGP_NODShiLtJ_T0010975.1 MGP_NODShiLtJ_G0009108.1 mouse_genomes_project 9 84084748 84084822 + Gm25250 miRNA miRNA MGP_NODShiLtJ_T0002411.1 MGP_NODShiLtJ_G0002320.1 mouse_genomes_project 9 119013272 119014287 + TEC TEC MGP_NODShiLtJ_T0093431.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112625542 112627567 - Cep63 protein_coding TEC MGP_NODShiLtJ_T0093432.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112627538 112669551 - MGP_NODShiLtJ_P0093432 Cep63 protein_coding protein_coding MGP_NODShiLtJ_T0093433.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112627551 112669961 - MGP_NODShiLtJ_P0093433 Cep63 protein_coding protein_coding MGP_NODShiLtJ_T0093434.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112627647 112628130 - Cep63 protein_coding retained_intron MGP_NODShiLtJ_T0093435.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112631364 112664680 - Cep63 protein_coding retained_intron MGP_NODShiLtJ_T0093436.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112639192 112643723 - Cep63 protein_coding retained_intron MGP_NODShiLtJ_T0093437.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112658028 112669450 - MGP_NODShiLtJ_P0093437 Cep63 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093438.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112661535 112669936 - MGP_NODShiLtJ_P0093438 Cep63 protein_coding protein_coding MGP_NODShiLtJ_T0093439.1 MGP_NODShiLtJ_G0034987.1 mouse_genomes_project 9 112661585 112669936 - MGP_NODShiLtJ_P0093439 Cep63 protein_coding protein_coding MGP_NODShiLtJ_T0091007.1 MGP_NODShiLtJ_G0034254.1 mouse_genomes_project 9 21820881 21846952 + MGP_NODShiLtJ_P0091007 AB124611 protein_coding protein_coding MGP_NODShiLtJ_T0091008.1 MGP_NODShiLtJ_G0034254.1 mouse_genomes_project 9 21820906 21846945 + MGP_NODShiLtJ_P0091008 AB124611 protein_coding protein_coding MGP_NODShiLtJ_T0091009.1 MGP_NODShiLtJ_G0034254.1 mouse_genomes_project 9 21820933 21846950 + MGP_NODShiLtJ_P0091009 AB124611 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092053.1 MGP_NODShiLtJ_G0034654.1 mouse_genomes_project 9 61174092 61220874 + MGP_NODShiLtJ_P0092053 Snupn protein_coding protein_coding MGP_NODShiLtJ_T0093721.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 116992375 117019436 - MGP_NODShiLtJ_P0093721 Tex264 protein_coding protein_coding MGP_NODShiLtJ_T0093722.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 116992375 117019295 - MGP_NODShiLtJ_P0093722 Tex264 protein_coding protein_coding MGP_NODShiLtJ_T0093723.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 116992381 117019528 - MGP_NODShiLtJ_P0093723 Tex264 protein_coding protein_coding MGP_NODShiLtJ_T0093724.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 116992621 116997615 - Tex264 protein_coding processed_transcript MGP_NODShiLtJ_T0093725.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 116992677 117019532 - Tex264 protein_coding processed_transcript MGP_NODShiLtJ_T0093726.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 116992866 117019540 - Tex264 protein_coding processed_transcript MGP_NODShiLtJ_T0093727.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 116996027 117019522 - Tex264 protein_coding processed_transcript MGP_NODShiLtJ_T0093728.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 117011654 117018918 - Tex264 protein_coding processed_transcript MGP_NODShiLtJ_T0093729.1 MGP_NODShiLtJ_G0035041.1 mouse_genomes_project 9 117018548 117019516 - Tex264 protein_coding processed_transcript MGP_NODShiLtJ_T0005499.1 MGP_NODShiLtJ_G0004634.1 mouse_genomes_project 9 132867284 132873642 - 4930593C16Rik antisense antisense MGP_NODShiLtJ_T0093648.1 MGP_NODShiLtJ_G0035026.1 mouse_genomes_project 9 116593520 116662326 + MGP_NODShiLtJ_P0093648 Poc1a protein_coding protein_coding MGP_NODShiLtJ_T0093649.1 MGP_NODShiLtJ_G0035026.1 mouse_genomes_project 9 116593839 116662339 + MGP_NODShiLtJ_P0093649 Poc1a protein_coding protein_coding MGP_NODShiLtJ_T0093650.1 MGP_NODShiLtJ_G0035026.1 mouse_genomes_project 9 116603310 116663060 + Poc1a protein_coding processed_transcript MGP_NODShiLtJ_T0093651.1 MGP_NODShiLtJ_G0035026.1 mouse_genomes_project 9 116613203 116662324 + Poc1a protein_coding processed_transcript MGP_NODShiLtJ_T0093652.1 MGP_NODShiLtJ_G0035026.1 mouse_genomes_project 9 116639901 116662325 + Poc1a protein_coding processed_transcript MGP_NODShiLtJ_T0099632.1 MGP_NODShiLtJ_G0038026.1 mouse_genomes_project 9 100631091 100631196 + Gm26101 snRNA snRNA MGP_NODShiLtJ_T0099642.1 MGP_NODShiLtJ_G0038036.1 mouse_genomes_project 9 118382470 118382569 + Gm23856 snRNA snRNA MGP_NODShiLtJ_T0009238.1 MGP_NODShiLtJ_G0007416.1 mouse_genomes_project 9 111313788 111319560 + Gm28979 lincRNA lincRNA MGP_NODShiLtJ_T0002309.1 MGP_NODShiLtJ_G0002219.1 mouse_genomes_project 9 37006159 37007312 - TEC TEC MGP_NODShiLtJ_T0015926.1 MGP_NODShiLtJ_G0014034.1 mouse_genomes_project 9 48560198 48560434 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005434.1 MGP_NODShiLtJ_G0004589.1 mouse_genomes_project 9 104973649 105007789 - Gm16126 antisense antisense MGP_NODShiLtJ_T0018352.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44368658 44606196 + processed_transcript lincRNA MGP_NODShiLtJ_T0018353.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44368787 44496250 + processed_transcript lincRNA MGP_NODShiLtJ_T0018354.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44368822 44433019 + processed_transcript lincRNA MGP_NODShiLtJ_T0018355.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44482766 44606653 + processed_transcript lincRNA MGP_NODShiLtJ_T0018356.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44482874 44632368 + processed_transcript lincRNA MGP_NODShiLtJ_T0018357.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44595769 44609005 + processed_transcript lincRNA MGP_NODShiLtJ_T0018358.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44596250 44609008 + processed_transcript lincRNA MGP_NODShiLtJ_T0018359.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44596999 44609006 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018360.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44597526 44629948 + processed_transcript lincRNA MGP_NODShiLtJ_T0018361.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44597540 44632172 + processed_transcript lincRNA MGP_NODShiLtJ_T0018362.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44597612 44608665 + processed_transcript lincRNA MGP_NODShiLtJ_T0018363.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44604672 44608916 + processed_transcript retained_intron MGP_NODShiLtJ_T0018364.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44617655 44629914 + processed_transcript lincRNA MGP_NODShiLtJ_T0018365.1 MGP_NODShiLtJ_G0015602.1 mouse_genomes_project 9 44631419 44634953 + processed_transcript retained_intron MGP_NODShiLtJ_T0011624.1 MGP_NODShiLtJ_G0009757.1 mouse_genomes_project 9 22019124 22019308 + Gm27373 misc_RNA misc_RNA MGP_NODShiLtJ_T0092435.1 MGP_NODShiLtJ_G0034761.1 mouse_genomes_project 9 70745894 70781856 + MGP_NODShiLtJ_P0092435 Rbpms2 protein_coding protein_coding MGP_NODShiLtJ_T0092436.1 MGP_NODShiLtJ_G0034761.1 mouse_genomes_project 9 70747133 70781833 + MGP_NODShiLtJ_P0092436 Rbpms2 protein_coding protein_coding MGP_NODShiLtJ_T0093321.1 MGP_NODShiLtJ_G0034958.1 mouse_genomes_project 9 108220391 108235344 - MGP_NODShiLtJ_P0093321 Mrps22 protein_coding protein_coding MGP_NODShiLtJ_T0093322.1 MGP_NODShiLtJ_G0034958.1 mouse_genomes_project 9 108227763 108235329 - Mrps22 protein_coding retained_intron MGP_NODShiLtJ_T0009135.1 MGP_NODShiLtJ_G0007334.1 mouse_genomes_project 9 32370829 32372688 - Gm17508 lincRNA lincRNA MGP_NODShiLtJ_T0091819.1 MGP_NODShiLtJ_G0034580.1 mouse_genomes_project 9 54289397 54290817 + MGP_NODShiLtJ_P0091819 Timm8b protein_coding protein_coding MGP_NODShiLtJ_T0009152.1 MGP_NODShiLtJ_G0007348.1 mouse_genomes_project 9 46603008 46603904 + Gm28215 lincRNA lincRNA MGP_NODShiLtJ_T0091376.1 MGP_NODShiLtJ_G0034386.1 mouse_genomes_project 9 40228918 40241247 + MGP_NODShiLtJ_P0091376 Olfr889 protein_coding protein_coding MGP_NODShiLtJ_T0092292.1 MGP_NODShiLtJ_G0034717.1 mouse_genomes_project 9 67065017 67077573 - MGP_NODShiLtJ_P0092292 Spesp1 protein_coding protein_coding MGP_NODShiLtJ_T0018346.1 MGP_NODShiLtJ_G0015599.1 mouse_genomes_project 9 37971311 37972645 - processed_transcript lincRNA MGP_NODShiLtJ_T0018347.1 MGP_NODShiLtJ_G0015599.1 mouse_genomes_project 9 37971352 37972697 - processed_transcript lincRNA MGP_NODShiLtJ_T0090990.1 MGP_NODShiLtJ_G0034251.1 mouse_genomes_project 9 21689940 21699131 + MGP_NODShiLtJ_P0090990 Qtrt1 protein_coding protein_coding MGP_NODShiLtJ_T0002335.1 MGP_NODShiLtJ_G0002245.1 mouse_genomes_project 9 78850432 78852275 + TEC TEC MGP_NODShiLtJ_T0091391.1 MGP_NODShiLtJ_G0034401.1 mouse_genomes_project 9 40722208 40723141 + MGP_NODShiLtJ_P0091391 Olfr904 protein_coding protein_coding MGP_NODShiLtJ_T0094742.1 MGP_NODShiLtJ_G0035228.1 mouse_genomes_project 9 131838803 131848647 - MGP_NODShiLtJ_P0094742 Xirp1 protein_coding protein_coding MGP_NODShiLtJ_T0094712.1 MGP_NODShiLtJ_G0035215.1 mouse_genomes_project 9 131115285 131121293 - MGP_NODShiLtJ_P0094712 Myd88 protein_coding protein_coding MGP_NODShiLtJ_T0094713.1 MGP_NODShiLtJ_G0035215.1 mouse_genomes_project 9 131115288 131119311 - MGP_NODShiLtJ_P0094713 Myd88 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094714.1 MGP_NODShiLtJ_G0035215.1 mouse_genomes_project 9 131115297 131121254 - Myd88 protein_coding retained_intron MGP_NODShiLtJ_T0094716.1 MGP_NODShiLtJ_G0035215.1 mouse_genomes_project 9 131120941 131122663 - MGP_NODShiLtJ_P0094716 Myd88 protein_coding protein_coding MGP_NODShiLtJ_T0090962.1 MGP_NODShiLtJ_G0034241.1 mouse_genomes_project 9 21388211 21399553 - MGP_NODShiLtJ_P0090962 Cdc37 protein_coding protein_coding MGP_NODShiLtJ_T0094692.1 MGP_NODShiLtJ_G0035208.1 mouse_genomes_project 9 130822180 130845650 - MGP_NODShiLtJ_P0094692 Plcd1 protein_coding protein_coding MGP_NODShiLtJ_T0009164.1 MGP_NODShiLtJ_G0007357.1 mouse_genomes_project 9 60813823 60821599 + Gm26868 lincRNA lincRNA MGP_NODShiLtJ_T0091411.1 MGP_NODShiLtJ_G0034415.1 mouse_genomes_project 9 41126235 41129436 + MGP_NODShiLtJ_P0091411 Olfr921 protein_coding protein_coding MGP_NODShiLtJ_T0005466.1 MGP_NODShiLtJ_G0004609.1 mouse_genomes_project 9 116772220 116772958 - Gm28959 antisense antisense MGP_NODShiLtJ_T0094626.1 MGP_NODShiLtJ_G0035192.1 mouse_genomes_project 9 126161045 126188900 - MGP_NODShiLtJ_P0094626 Cmtm7 protein_coding protein_coding MGP_NODShiLtJ_T0094627.1 MGP_NODShiLtJ_G0035192.1 mouse_genomes_project 9 126161045 126188900 - MGP_NODShiLtJ_P0094627 Cmtm7 protein_coding protein_coding MGP_NODShiLtJ_T0090717.1 MGP_NODShiLtJ_G0034134.1 mouse_genomes_project 9 5956940 5979252 - MGP_NODShiLtJ_P0090717 9230110C19Rik protein_coding protein_coding MGP_NODShiLtJ_T0098469.1 MGP_NODShiLtJ_G0036868.1 mouse_genomes_project 9 112182724 112185204 - Gm29388 sense_intronic sense_intronic MGP_NODShiLtJ_T0091575.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47469459 47474884 - Abcg4 protein_coding retained_intron MGP_NODShiLtJ_T0091576.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47469459 47485199 - MGP_NODShiLtJ_P0091576 Abcg4 protein_coding protein_coding MGP_NODShiLtJ_T0091577.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47469461 47486267 - MGP_NODShiLtJ_P0091577 Abcg4 protein_coding protein_coding MGP_NODShiLtJ_T0091578.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47470723 47476108 - Abcg4 protein_coding retained_intron MGP_NODShiLtJ_T0091579.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47471366 47475870 - MGP_NODShiLtJ_P0091579 Abcg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091580.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47473340 47485191 - Abcg4 protein_coding processed_transcript MGP_NODShiLtJ_T0091581.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47473772 47476061 - Abcg4 protein_coding retained_intron MGP_NODShiLtJ_T0091582.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47476917 47477928 - Abcg4 protein_coding retained_intron MGP_NODShiLtJ_T0091583.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47478115 47486009 - MGP_NODShiLtJ_P0091583 Abcg4 protein_coding protein_coding MGP_NODShiLtJ_T0091584.1 MGP_NODShiLtJ_G0034497.1 mouse_genomes_project 9 47478178 47485790 - MGP_NODShiLtJ_P0091584 Abcg4 protein_coding protein_coding MGP_NODShiLtJ_T0090834.1 MGP_NODShiLtJ_G0034174.1 mouse_genomes_project 9 17689142 17711260 + MGP_NODShiLtJ_P0090834 Chordc1 protein_coding protein_coding MGP_NODShiLtJ_T0094762.1 MGP_NODShiLtJ_G0035235.1 mouse_genomes_project 9 132423103 132464684 + MGP_NODShiLtJ_P0094762 Entpd3 protein_coding protein_coding MGP_NODShiLtJ_T0094763.1 MGP_NODShiLtJ_G0035235.1 mouse_genomes_project 9 132454399 132457320 + Entpd3 protein_coding retained_intron MGP_NODShiLtJ_T0091256.1 MGP_NODShiLtJ_G0034336.1 mouse_genomes_project 9 37208433 37217904 + Pus3 protein_coding retained_intron MGP_NODShiLtJ_T0091257.1 MGP_NODShiLtJ_G0034336.1 mouse_genomes_project 9 37209298 37218167 + MGP_NODShiLtJ_P0091257 Pus3 protein_coding protein_coding MGP_NODShiLtJ_T0091258.1 MGP_NODShiLtJ_G0034336.1 mouse_genomes_project 9 37209304 37217605 + MGP_NODShiLtJ_P0091258 Pus3 protein_coding protein_coding MGP_NODShiLtJ_T0002310.1 MGP_NODShiLtJ_G0002220.1 mouse_genomes_project 9 37548498 37549572 + TEC TEC MGP_NODShiLtJ_T0093710.1 MGP_NODShiLtJ_G0035035.1 mouse_genomes_project 9 116816671 116818953 + MGP_NODShiLtJ_P0093710 Iqcf1 protein_coding protein_coding MGP_NODShiLtJ_T0093711.1 MGP_NODShiLtJ_G0035035.1 mouse_genomes_project 9 116816696 116818958 + MGP_NODShiLtJ_P0093711 Iqcf1 protein_coding protein_coding MGP_NODShiLtJ_T0002412.1 MGP_NODShiLtJ_G0002321.1 mouse_genomes_project 9 119083167 119085101 + TEC TEC MGP_NODShiLtJ_T0093069.1 MGP_NODShiLtJ_G0034898.1 mouse_genomes_project 9 95038980 95054004 + MGP_NODShiLtJ_P0093069 Ripply2 protein_coding protein_coding MGP_NODShiLtJ_T0093070.1 MGP_NODShiLtJ_G0034898.1 mouse_genomes_project 9 95039079 95054003 + MGP_NODShiLtJ_P0093070 Ripply2 protein_coding protein_coding MGP_NODShiLtJ_T0092364.1 MGP_NODShiLtJ_G0034735.1 mouse_genomes_project 9 69120750 69124040 + MGP_NODShiLtJ_P0092364 Snapc5 protein_coding protein_coding MGP_NODShiLtJ_T0009269.1 MGP_NODShiLtJ_G0007438.1 mouse_genomes_project 9 130100553 130102554 - Platr11 lincRNA lincRNA MGP_NODShiLtJ_T0099620.1 MGP_NODShiLtJ_G0038014.1 mouse_genomes_project 9 77957844 77957948 - Gm25163 snRNA snRNA MGP_NODShiLtJ_T0091591.1 MGP_NODShiLtJ_G0034504.1 mouse_genomes_project 9 47587200 47600820 + MGP_NODShiLtJ_P0091591 Hyou1 protein_coding protein_coding MGP_NODShiLtJ_T0091592.1 MGP_NODShiLtJ_G0034504.1 mouse_genomes_project 9 47587256 47599201 + MGP_NODShiLtJ_P0091592 Hyou1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091593.1 MGP_NODShiLtJ_G0034504.1 mouse_genomes_project 9 47587267 47598414 + Hyou1 protein_coding retained_intron MGP_NODShiLtJ_T0091594.1 MGP_NODShiLtJ_G0034504.1 mouse_genomes_project 9 47587283 47600814 + MGP_NODShiLtJ_P0091594 Hyou1 protein_coding protein_coding MGP_NODShiLtJ_T0091595.1 MGP_NODShiLtJ_G0034504.1 mouse_genomes_project 9 47587294 47593785 + Hyou1 protein_coding retained_intron MGP_NODShiLtJ_T0091596.1 MGP_NODShiLtJ_G0034504.1 mouse_genomes_project 9 47587333 47598780 + MGP_NODShiLtJ_P0091596 Hyou1 protein_coding protein_coding MGP_NODShiLtJ_T0091597.1 MGP_NODShiLtJ_G0034504.1 mouse_genomes_project 9 47588239 47591862 + MGP_NODShiLtJ_P0091597 Hyou1 protein_coding protein_coding MGP_NODShiLtJ_T0091598.1 MGP_NODShiLtJ_G0034504.1 mouse_genomes_project 9 47598338 47598990 + Hyou1 protein_coding retained_intron MGP_NODShiLtJ_T0092193.1 MGP_NODShiLtJ_G0034692.1 mouse_genomes_project 9 63098480 63104965 - Rec114 protein_coding processed_transcript MGP_NODShiLtJ_T0092194.1 MGP_NODShiLtJ_G0034692.1 mouse_genomes_project 9 63098486 63185673 - MGP_NODShiLtJ_P0092194 Rec114 protein_coding protein_coding MGP_NODShiLtJ_T0092195.1 MGP_NODShiLtJ_G0034692.1 mouse_genomes_project 9 63098508 63109943 - Rec114 protein_coding processed_transcript MGP_NODShiLtJ_T0092196.1 MGP_NODShiLtJ_G0034692.1 mouse_genomes_project 9 63098511 63106041 - MGP_NODShiLtJ_P0092196 Rec114 protein_coding protein_coding MGP_NODShiLtJ_T0092197.1 MGP_NODShiLtJ_G0034692.1 mouse_genomes_project 9 63111536 63188078 - MGP_NODShiLtJ_P0092197 Rec114 protein_coding protein_coding MGP_NODShiLtJ_T0094251.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119499935 119531323 + MGP_NODShiLtJ_P0094251 Col7a1 protein_coding protein_coding MGP_NODShiLtJ_T0094252.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119500094 119531327 + MGP_NODShiLtJ_P0094252 Col7a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094253.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119500094 119531323 + MGP_NODShiLtJ_P0094253 Col7a1 protein_coding protein_coding MGP_NODShiLtJ_T0094254.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119500836 119501806 + Col7a1 protein_coding retained_intron MGP_NODShiLtJ_T0094255.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119514038 119514717 + Col7a1 protein_coding retained_intron MGP_NODShiLtJ_T0094256.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119516069 119526663 + Col7a1 protein_coding retained_intron MGP_NODShiLtJ_T0094257.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119521783 119523637 + Col7a1 protein_coding retained_intron MGP_NODShiLtJ_T0094258.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119529101 119530951 + Col7a1 protein_coding retained_intron MGP_NODShiLtJ_T0094259.1 MGP_NODShiLtJ_G0035117.1 mouse_genomes_project 9 119529334 119530364 + Col7a1 protein_coding retained_intron MGP_NODShiLtJ_T0093469.1 MGP_NODShiLtJ_G0034993.1 mouse_genomes_project 9 113193396 113246088 + Rab6b protein_coding processed_transcript MGP_NODShiLtJ_T0093470.1 MGP_NODShiLtJ_G0034993.1 mouse_genomes_project 9 113193416 113268713 + MGP_NODShiLtJ_P0093470 Rab6b protein_coding protein_coding MGP_NODShiLtJ_T0100904.1 MGP_NODShiLtJ_G0039298.1 mouse_genomes_project 9 84585191 84585318 - Gm23609 snoRNA snoRNA MGP_NODShiLtJ_T0018416.1 MGP_NODShiLtJ_G0015623.1 mouse_genomes_project 9 111778023 111871505 - Gm29521 processed_transcript lincRNA MGP_NODShiLtJ_T0018417.1 MGP_NODShiLtJ_G0015623.1 mouse_genomes_project 9 111868336 111871547 - Gm29521 processed_transcript retained_intron MGP_NODShiLtJ_T0091887.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54594017 54717402 - MGP_NODShiLtJ_P0091887 Sik2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091888.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54594017 54717365 - MGP_NODShiLtJ_P0091888 Sik2 protein_coding protein_coding MGP_NODShiLtJ_T0091889.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54594017 54717365 - MGP_NODShiLtJ_P0091889 Sik2 protein_coding protein_coding MGP_NODShiLtJ_T0091890.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54594017 54717502 - MGP_NODShiLtJ_P0091890 Sik2 protein_coding protein_coding MGP_NODShiLtJ_T0091891.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54595273 54717304 - MGP_NODShiLtJ_P0091891 Sik2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091892.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54632040 54717455 - Sik2 protein_coding processed_transcript MGP_NODShiLtJ_T0091893.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54634338 54717413 - Sik2 protein_coding processed_transcript MGP_NODShiLtJ_T0091894.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54637612 54717429 - Sik2 protein_coding retained_intron MGP_NODShiLtJ_T0091895.1 MGP_NODShiLtJ_G0034592.1 mouse_genomes_project 9 54704251 54717440 - Sik2 protein_coding retained_intron MGP_NODShiLtJ_T0091331.1 MGP_NODShiLtJ_G0034361.1 mouse_genomes_project 9 39195887 39222018 - MGP_NODShiLtJ_P0091331 Slc37a2 protein_coding protein_coding MGP_NODShiLtJ_T0091332.1 MGP_NODShiLtJ_G0034361.1 mouse_genomes_project 9 39197054 39221694 - MGP_NODShiLtJ_P0091332 Slc37a2 protein_coding protein_coding MGP_NODShiLtJ_T0091333.1 MGP_NODShiLtJ_G0034361.1 mouse_genomes_project 9 39197250 39201893 - Slc37a2 protein_coding retained_intron MGP_NODShiLtJ_T0093566.1 MGP_NODShiLtJ_G0035012.1 mouse_genomes_project 9 115383396 115385141 - MGP_NODShiLtJ_P0093566 1700080E11Rik protein_coding protein_coding MGP_NODShiLtJ_T0093567.1 MGP_NODShiLtJ_G0035012.1 mouse_genomes_project 9 115384360 115385125 - MGP_NODShiLtJ_P0093567 1700080E11Rik protein_coding protein_coding MGP_NODShiLtJ_T0092793.1 MGP_NODShiLtJ_G0034832.1 mouse_genomes_project 9 81290813 81368827 + MGP_NODShiLtJ_P0092793 Myo5c protein_coding protein_coding MGP_NODShiLtJ_T0100880.1 MGP_NODShiLtJ_G0039274.1 mouse_genomes_project 9 43722845 43722931 + Snord14c snoRNA snoRNA MGP_NODShiLtJ_T0092199.1 MGP_NODShiLtJ_G0034694.1 mouse_genomes_project 9 63328929 63532168 - MGP_NODShiLtJ_P0092199 Neo1 protein_coding protein_coding MGP_NODShiLtJ_T0092200.1 MGP_NODShiLtJ_G0034694.1 mouse_genomes_project 9 63329081 63531855 - MGP_NODShiLtJ_P0092200 Neo1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094703.1 MGP_NODShiLtJ_G0035212.1 mouse_genomes_project 9 130926291 130949045 - MGP_NODShiLtJ_P0094703 Slc22a14 protein_coding protein_coding MGP_NODShiLtJ_T0094704.1 MGP_NODShiLtJ_G0035212.1 mouse_genomes_project 9 130926292 131147859 - MGP_NODShiLtJ_P0094704 Slc22a14 protein_coding protein_coding MGP_NODShiLtJ_T0094705.1 MGP_NODShiLtJ_G0035212.1 mouse_genomes_project 9 130926504 130930975 - MGP_NODShiLtJ_P0094705 Slc22a14 protein_coding protein_coding MGP_NODShiLtJ_T0094706.1 MGP_NODShiLtJ_G0035212.1 mouse_genomes_project 9 130938288 130949000 - MGP_NODShiLtJ_P0094706 Slc22a14 protein_coding protein_coding MGP_NODShiLtJ_T0018418.1 MGP_NODShiLtJ_G0015624.1 mouse_genomes_project 9 113523159 113563498 + 5830418P13Rik processed_transcript antisense MGP_NODShiLtJ_T0018419.1 MGP_NODShiLtJ_G0015624.1 mouse_genomes_project 9 113524705 113525846 + 5830418P13Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018420.1 MGP_NODShiLtJ_G0015624.1 mouse_genomes_project 9 113524729 113527359 + 5830418P13Rik processed_transcript antisense MGP_NODShiLtJ_T0090725.1 MGP_NODShiLtJ_G0034140.1 mouse_genomes_project 9 7011778 7274563 - MGP_NODShiLtJ_P0090725 Arhgap42 protein_coding protein_coding MGP_NODShiLtJ_T0090726.1 MGP_NODShiLtJ_G0034140.1 mouse_genomes_project 9 7011834 7274520 - MGP_NODShiLtJ_P0090726 Arhgap42 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090727.1 MGP_NODShiLtJ_G0034140.1 mouse_genomes_project 9 7028691 7274563 - Arhgap42 protein_coding retained_intron MGP_NODShiLtJ_T0090728.1 MGP_NODShiLtJ_G0034140.1 mouse_genomes_project 9 7178976 7274488 - MGP_NODShiLtJ_P0090728 Arhgap42 protein_coding protein_coding MGP_NODShiLtJ_T0090935.1 MGP_NODShiLtJ_G0034225.1 mouse_genomes_project 9 20996139 21044021 - MGP_NODShiLtJ_P0090935 Col5a3 protein_coding protein_coding MGP_NODShiLtJ_T0090936.1 MGP_NODShiLtJ_G0034225.1 mouse_genomes_project 9 21010403 21044021 - Col5a3 protein_coding retained_intron MGP_NODShiLtJ_T0016052.1 MGP_NODShiLtJ_G0014160.1 mouse_genomes_project 9 133195283 133195631 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094789.1 MGP_NODShiLtJ_G0035240.1 mouse_genomes_project 9 133337627 133434348 + MGP_NODShiLtJ_P0094789 Trak1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094790.1 MGP_NODShiLtJ_G0035240.1 mouse_genomes_project 9 133341694 133453261 + MGP_NODShiLtJ_P0094790 Trak1 protein_coding protein_coding MGP_NODShiLtJ_T0090852.1 MGP_NODShiLtJ_G0034180.1 mouse_genomes_project 9 17918823 17926222 + MGP_NODShiLtJ_P0090852 Mbd3l1 protein_coding protein_coding MGP_NODShiLtJ_T0002347.1 MGP_NODShiLtJ_G0002257.1 mouse_genomes_project 9 93196473 93198314 - TEC TEC MGP_NODShiLtJ_T0015945.1 MGP_NODShiLtJ_G0014053.1 mouse_genomes_project 9 77888240 77888856 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005452.1 MGP_NODShiLtJ_G0004598.1 mouse_genomes_project 9 107605897 107614650 + 4921534H16Rik antisense antisense MGP_NODShiLtJ_T0005453.1 MGP_NODShiLtJ_G0004598.1 mouse_genomes_project 9 107605897 107608247 + 4921534H16Rik antisense antisense MGP_NODShiLtJ_T0100884.1 MGP_NODShiLtJ_G0039278.1 mouse_genomes_project 9 47604332 47604451 - Gm26306 snoRNA snoRNA MGP_NODShiLtJ_T0092557.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74864159 74898804 + MGP_NODShiLtJ_P0092557 Ice2 protein_coding protein_coding MGP_NODShiLtJ_T0092558.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74864176 74897752 + Ice2 protein_coding retained_intron MGP_NODShiLtJ_T0092559.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74864180 74873005 + MGP_NODShiLtJ_P0092559 Ice2 protein_coding protein_coding MGP_NODShiLtJ_T0092560.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74864186 74873379 + MGP_NODShiLtJ_P0092560 Ice2 protein_coding protein_coding MGP_NODShiLtJ_T0092561.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74864188 74873017 + MGP_NODShiLtJ_P0092561 Ice2 protein_coding protein_coding MGP_NODShiLtJ_T0092562.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74864190 74873636 + MGP_NODShiLtJ_P0092562 Ice2 protein_coding protein_coding MGP_NODShiLtJ_T0092563.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74864210 74875856 + MGP_NODShiLtJ_P0092563 Ice2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092564.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74864873 74872864 + Ice2 protein_coding retained_intron MGP_NODShiLtJ_T0092565.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74882390 74891387 + Ice2 protein_coding processed_transcript MGP_NODShiLtJ_T0092566.1 MGP_NODShiLtJ_G0034788.1 mouse_genomes_project 9 74882548 74892706 + Ice2 protein_coding retained_intron MGP_NODShiLtJ_T0005458.1 MGP_NODShiLtJ_G0004603.1 mouse_genomes_project 9 113660760 113669552 + 4932413F04Rik antisense antisense MGP_NODShiLtJ_T0005490.1 MGP_NODShiLtJ_G0004628.1 mouse_genomes_project 9 122532368 122532982 + Gm43236 antisense antisense MGP_NODShiLtJ_T0018381.1 MGP_NODShiLtJ_G0015610.1 mouse_genomes_project 9 78867821 78870872 + 2310009A05Rik processed_transcript antisense MGP_NODShiLtJ_T0018382.1 MGP_NODShiLtJ_G0015610.1 mouse_genomes_project 9 78867833 78870472 + 2310009A05Rik processed_transcript retained_intron MGP_NODShiLtJ_T0094060.1 MGP_NODShiLtJ_G0035089.1 mouse_genomes_project 9 118820860 118825565 + Amt protein_coding processed_transcript MGP_NODShiLtJ_T0094061.1 MGP_NODShiLtJ_G0035089.1 mouse_genomes_project 9 118820877 118826289 + MGP_NODShiLtJ_P0094061 Amt protein_coding protein_coding MGP_NODShiLtJ_T0094062.1 MGP_NODShiLtJ_G0035089.1 mouse_genomes_project 9 118820917 118821539 + Amt protein_coding retained_intron MGP_NODShiLtJ_T0094063.1 MGP_NODShiLtJ_G0035089.1 mouse_genomes_project 9 118820929 118823451 + Amt protein_coding retained_intron MGP_NODShiLtJ_T0093429.1 MGP_NODShiLtJ_G0034986.1 mouse_genomes_project 9 112546534 112587257 + MGP_NODShiLtJ_P0093429 Ky protein_coding protein_coding MGP_NODShiLtJ_T0093430.1 MGP_NODShiLtJ_G0034986.1 mouse_genomes_project 9 112562056 112568780 + Ky protein_coding retained_intron MGP_NODShiLtJ_T0005415.1 MGP_NODShiLtJ_G0004575.1 mouse_genomes_project 9 78397284 78401692 - Gm27241 antisense antisense MGP_NODShiLtJ_T0005416.1 MGP_NODShiLtJ_G0004575.1 mouse_genomes_project 9 78397418 78401864 - Gm27241 antisense antisense MGP_NODShiLtJ_T0094672.1 MGP_NODShiLtJ_G0035205.1 mouse_genomes_project 9 130330367 130641572 + MGP_NODShiLtJ_P0094672 Itga9 protein_coding protein_coding MGP_NODShiLtJ_T0094673.1 MGP_NODShiLtJ_G0035205.1 mouse_genomes_project 9 130417075 130542250 + Itga9 protein_coding processed_transcript MGP_NODShiLtJ_T0094674.1 MGP_NODShiLtJ_G0035205.1 mouse_genomes_project 9 130442544 130638260 + MGP_NODShiLtJ_P0094674 Itga9 protein_coding protein_coding MGP_NODShiLtJ_T0094675.1 MGP_NODShiLtJ_G0035205.1 mouse_genomes_project 9 130542302 130578476 + MGP_NODShiLtJ_P0094675 Itga9 protein_coding protein_coding MGP_NODShiLtJ_T0094676.1 MGP_NODShiLtJ_G0035205.1 mouse_genomes_project 9 130574255 130607962 + Itga9 protein_coding processed_transcript MGP_NODShiLtJ_T0094677.1 MGP_NODShiLtJ_G0035205.1 mouse_genomes_project 9 130608090 130637849 + Itga9 protein_coding processed_transcript MGP_NODShiLtJ_T0091674.1 MGP_NODShiLtJ_G0034528.1 mouse_genomes_project 9 48370918 48401223 + MGP_NODShiLtJ_P0091674 Amica1 protein_coding protein_coding MGP_NODShiLtJ_T0002392.1 MGP_NODShiLtJ_G0002301.1 mouse_genomes_project 9 112311233 112313748 + TEC TEC MGP_NODShiLtJ_T0005475.1 MGP_NODShiLtJ_G0004616.1 mouse_genomes_project 9 118011917 118021524 - Gm9917 antisense antisense MGP_NODShiLtJ_T0005476.1 MGP_NODShiLtJ_G0004616.1 mouse_genomes_project 9 118015945 118021527 - Gm9917 antisense antisense MGP_NODShiLtJ_T0005477.1 MGP_NODShiLtJ_G0004616.1 mouse_genomes_project 9 118016851 118020036 - Gm9917 antisense antisense MGP_NODShiLtJ_T0005478.1 MGP_NODShiLtJ_G0004616.1 mouse_genomes_project 9 118017455 118019892 - Gm9917 antisense antisense MGP_NODShiLtJ_T0002305.1 MGP_NODShiLtJ_G0002215.1 mouse_genomes_project 9 34403404 34404758 + TEC TEC MGP_NODShiLtJ_T0005365.1 MGP_NODShiLtJ_G0004541.1 mouse_genomes_project 9 30188935 30199549 + Gm15520 antisense antisense MGP_NODShiLtJ_T0091440.1 MGP_NODShiLtJ_G0034438.1 mouse_genomes_project 9 42276457 42277474 + MGP_NODShiLtJ_P0091440 Olfr148 protein_coding protein_coding MGP_NODShiLtJ_T0092029.1 MGP_NODShiLtJ_G0034644.1 mouse_genomes_project 9 60202221 60223045 + MGP_NODShiLtJ_P0092029 Rcn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092030.1 MGP_NODShiLtJ_G0034644.1 mouse_genomes_project 9 60202233 60220240 + MGP_NODShiLtJ_P0092030 Rcn2 protein_coding protein_coding MGP_NODShiLtJ_T0092031.1 MGP_NODShiLtJ_G0034644.1 mouse_genomes_project 9 60202246 60204604 + Rcn2 protein_coding retained_intron MGP_NODShiLtJ_T0092032.1 MGP_NODShiLtJ_G0034644.1 mouse_genomes_project 9 60202261 60214216 + Rcn2 protein_coding retained_intron MGP_NODShiLtJ_T0002420.1 MGP_NODShiLtJ_G0002329.1 mouse_genomes_project 9 121229910 121233291 - TEC TEC MGP_NODShiLtJ_T0002408.1 MGP_NODShiLtJ_G0002317.1 mouse_genomes_project 9 118291364 118292436 - TEC TEC MGP_NODShiLtJ_T0091184.1 MGP_NODShiLtJ_G0034321.1 mouse_genomes_project 9 33510355 33689002 + MGP_NODShiLtJ_P0091184 Arhgap32 protein_coding protein_coding MGP_NODShiLtJ_T0091185.1 MGP_NODShiLtJ_G0034321.1 mouse_genomes_project 9 33523785 33592151 + MGP_NODShiLtJ_P0091185 Arhgap32 protein_coding protein_coding MGP_NODShiLtJ_T0091186.1 MGP_NODShiLtJ_G0034321.1 mouse_genomes_project 9 33592095 33624241 + Arhgap32 protein_coding retained_intron MGP_NODShiLtJ_T0091187.1 MGP_NODShiLtJ_G0034321.1 mouse_genomes_project 9 33623325 33681774 + MGP_NODShiLtJ_P0091187 Arhgap32 protein_coding protein_coding MGP_NODShiLtJ_T0091188.1 MGP_NODShiLtJ_G0034321.1 mouse_genomes_project 9 33642558 33684801 + MGP_NODShiLtJ_P0091188 Arhgap32 protein_coding protein_coding MGP_NODShiLtJ_T0091189.1 MGP_NODShiLtJ_G0034321.1 mouse_genomes_project 9 33642901 33666311 + MGP_NODShiLtJ_P0091189 Arhgap32 protein_coding protein_coding MGP_NODShiLtJ_T0091190.1 MGP_NODShiLtJ_G0034321.1 mouse_genomes_project 9 33665491 33669792 + Arhgap32 protein_coding retained_intron MGP_NODShiLtJ_T0005418.1 MGP_NODShiLtJ_G0004577.1 mouse_genomes_project 9 82036524 82182373 - Gm26903 antisense antisense MGP_NODShiLtJ_T0002303.1 MGP_NODShiLtJ_G0002213.1 mouse_genomes_project 9 33955044 33956853 - TEC TEC MGP_NODShiLtJ_T0018336.1 MGP_NODShiLtJ_G0015596.1 mouse_genomes_project 9 14313860 14318633 + Gm16568 processed_transcript processed_transcript MGP_NODShiLtJ_T0005503.1 MGP_NODShiLtJ_G0004637.1 mouse_genomes_project 9 135739287 135741225 + Gm17120 antisense antisense MGP_NODShiLtJ_T0091459.1 MGP_NODShiLtJ_G0034457.1 mouse_genomes_project 9 42899178 42900144 + MGP_NODShiLtJ_P0091459 Olfr982 protein_coding protein_coding MGP_NODShiLtJ_T0101204.1 MGP_NODShiLtJ_G0039510.1 mouse_genomes_project 9 62601308 62607138 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101205.1 MGP_NODShiLtJ_G0039510.1 mouse_genomes_project 9 62606435 62606952 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0018435.1 MGP_NODShiLtJ_G0015631.1 mouse_genomes_project 9 134395197 134415052 - A730085K08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0090829.1 MGP_NODShiLtJ_G0034170.1 mouse_genomes_project 9 14747295 14777525 + MGP_NODShiLtJ_P0090829 Slc36a4 protein_coding protein_coding MGP_NODShiLtJ_T0091031.1 MGP_NODShiLtJ_G0034263.1 mouse_genomes_project 9 22203228 22205069 + MGP_NODShiLtJ_P0091031 Angptl8 protein_coding protein_coding MGP_NODShiLtJ_T0015976.1 MGP_NODShiLtJ_G0014084.1 mouse_genomes_project 9 90505557 90505723 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002368.1 MGP_NODShiLtJ_G0002277.1 mouse_genomes_project 9 104736203 104737297 + TEC TEC MGP_NODShiLtJ_T0010996.1 MGP_NODShiLtJ_G0009129.1 mouse_genomes_project 9 123120064 123120140 - Mir128-2 miRNA miRNA MGP_NODShiLtJ_T0005379.1 MGP_NODShiLtJ_G0004553.1 mouse_genomes_project 9 49587368 49588277 - Gm10680 antisense antisense MGP_NODShiLtJ_T0091995.1 MGP_NODShiLtJ_G0034635.1 mouse_genomes_project 9 59061998 59089987 - MGP_NODShiLtJ_P0091995 Chrnb4 protein_coding protein_coding MGP_NODShiLtJ_T0005479.1 MGP_NODShiLtJ_G0004617.1 mouse_genomes_project 9 118028860 118041546 - Gm16343 antisense antisense MGP_NODShiLtJ_T0098110.1 MGP_NODShiLtJ_G0036522.1 mouse_genomes_project 9 80030257 80030376 + n-R5s86 rRNA rRNA MGP_NODShiLtJ_T0092548.1 MGP_NODShiLtJ_G0034785.1 mouse_genomes_project 9 73162365 73164164 - MGP_NODShiLtJ_P0092548 C2cd4a protein_coding protein_coding MGP_NODShiLtJ_T0091426.1 MGP_NODShiLtJ_G0034430.1 mouse_genomes_project 9 41768260 41769205 - MGP_NODShiLtJ_P0091426 Olfr1537 protein_coding protein_coding MGP_NODShiLtJ_T0010957.1 MGP_NODShiLtJ_G0009090.1 mouse_genomes_project 9 54815623 54815707 - Mir34b miRNA miRNA MGP_NODShiLtJ_T0010938.1 MGP_NODShiLtJ_G0009071.1 mouse_genomes_project 9 21791131 21791201 - Mir199a-1 miRNA miRNA MGP_NODShiLtJ_T0090881.1 MGP_NODShiLtJ_G0034209.1 mouse_genomes_project 9 20311183 20438245 + MGP_NODShiLtJ_P0090881 Olfr872 protein_coding protein_coding MGP_NODShiLtJ_T0005433.1 MGP_NODShiLtJ_G0004588.1 mouse_genomes_project 9 104859285 104860604 + Gm28424 antisense antisense MGP_NODShiLtJ_T0093211.1 MGP_NODShiLtJ_G0034938.1 mouse_genomes_project 9 105067770 105131923 - MGP_NODShiLtJ_P0093211 Trpc1 protein_coding protein_coding MGP_NODShiLtJ_T0093212.1 MGP_NODShiLtJ_G0034938.1 mouse_genomes_project 9 105069315 105131923 - MGP_NODShiLtJ_P0093212 Trpc1 protein_coding protein_coding MGP_NODShiLtJ_T0093213.1 MGP_NODShiLtJ_G0034938.1 mouse_genomes_project 9 105069315 105131923 - MGP_NODShiLtJ_P0093213 Trpc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093214.1 MGP_NODShiLtJ_G0034938.1 mouse_genomes_project 9 105069315 105131923 - MGP_NODShiLtJ_P0093214 Trpc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093215.1 MGP_NODShiLtJ_G0034938.1 mouse_genomes_project 9 105080204 105083312 - Trpc1 protein_coding retained_intron MGP_NODShiLtJ_T0093216.1 MGP_NODShiLtJ_G0034938.1 mouse_genomes_project 9 105085912 105096253 - MGP_NODShiLtJ_P0093216 Trpc1 protein_coding protein_coding MGP_NODShiLtJ_T0093217.1 MGP_NODShiLtJ_G0034938.1 mouse_genomes_project 9 105130602 105131940 - Trpc1 protein_coding retained_intron MGP_NODShiLtJ_T0090865.1 MGP_NODShiLtJ_G0034193.1 mouse_genomes_project 9 19038068 19039010 + MGP_NODShiLtJ_P0090865 Olfr845 protein_coding protein_coding MGP_NODShiLtJ_T0091346.1 MGP_NODShiLtJ_G0034366.1 mouse_genomes_project 9 39479270 39517432 + MGP_NODShiLtJ_P0091346 Msantd2 protein_coding protein_coding MGP_NODShiLtJ_T0091121.1 MGP_NODShiLtJ_G0034301.1 mouse_genomes_project 9 27836687 27874784 - MGP_NODShiLtJ_P0091121 Gm1110 protein_coding protein_coding MGP_NODShiLtJ_T0093518.1 MGP_NODShiLtJ_G0035004.1 mouse_genomes_project 9 114165179 114182632 - MGP_NODShiLtJ_P0093518 Uba5 protein_coding protein_coding MGP_NODShiLtJ_T0093519.1 MGP_NODShiLtJ_G0035004.1 mouse_genomes_project 9 114166228 114175393 - MGP_NODShiLtJ_P0093519 Uba5 protein_coding protein_coding MGP_NODShiLtJ_T0093520.1 MGP_NODShiLtJ_G0035004.1 mouse_genomes_project 9 114168162 114182561 - MGP_NODShiLtJ_P0093520 Uba5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093521.1 MGP_NODShiLtJ_G0035004.1 mouse_genomes_project 9 114175975 114179961 - Uba5 protein_coding retained_intron MGP_NODShiLtJ_T0091485.1 MGP_NODShiLtJ_G0034466.1 mouse_genomes_project 9 43569713 43570115 + MGP_NODShiLtJ_P0091485 Gm21915 protein_coding protein_coding MGP_NODShiLtJ_T0002338.1 MGP_NODShiLtJ_G0002248.1 mouse_genomes_project 9 79815936 79819056 - TEC TEC MGP_NODShiLtJ_T0091572.1 MGP_NODShiLtJ_G0034494.1 mouse_genomes_project 9 47436424 47443607 + MGP_NODShiLtJ_P0091572 Ccdc153 protein_coding protein_coding MGP_NODShiLtJ_T0005421.1 MGP_NODShiLtJ_G0004580.1 mouse_genomes_project 9 85348681 85349434 - 4921509A06Rik antisense antisense MGP_NODShiLtJ_T0015964.1 MGP_NODShiLtJ_G0014072.1 mouse_genomes_project 9 83406954 83407159 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090847.1 MGP_NODShiLtJ_G0034178.1 mouse_genomes_project 9 17882296 17885153 + MGP_NODShiLtJ_P0090847 Mbd3l2 protein_coding protein_coding MGP_NODShiLtJ_T0092722.1 MGP_NODShiLtJ_G0034818.1 mouse_genomes_project 9 78783367 78842459 + MGP_NODShiLtJ_P0092722 Gm44503 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090883.1 MGP_NODShiLtJ_G0034211.1 mouse_genomes_project 9 20378289 20383130 + MGP_NODShiLtJ_P0090883 Olfr870 protein_coding protein_coding MGP_NODShiLtJ_T0094919.1 MGP_NODShiLtJ_G0035288.1 mouse_genomes_project 9 136310217 136321753 + MGP_NODShiLtJ_P0094919 Ccr2 protein_coding protein_coding MGP_NODShiLtJ_T0094920.1 MGP_NODShiLtJ_G0035288.1 mouse_genomes_project 9 136310416 136317347 + MGP_NODShiLtJ_P0094920 Ccr2 protein_coding protein_coding MGP_NODShiLtJ_T0094921.1 MGP_NODShiLtJ_G0035288.1 mouse_genomes_project 9 136310441 136316757 + MGP_NODShiLtJ_P0094921 Ccr2 protein_coding protein_coding MGP_NODShiLtJ_T0094922.1 MGP_NODShiLtJ_G0035288.1 mouse_genomes_project 9 136313839 136317347 + MGP_NODShiLtJ_P0094922 Ccr2 protein_coding protein_coding MGP_NODShiLtJ_T0092106.1 MGP_NODShiLtJ_G0034671.1 mouse_genomes_project 9 61944713 61962320 - MGP_NODShiLtJ_P0092106 Lman1l protein_coding protein_coding MGP_NODShiLtJ_T0092107.1 MGP_NODShiLtJ_G0034671.1 mouse_genomes_project 9 61944713 61962320 - MGP_NODShiLtJ_P0092107 Lman1l protein_coding protein_coding MGP_NODShiLtJ_T0093308.1 MGP_NODShiLtJ_G0034954.1 mouse_genomes_project 9 107925029 107927156 + MGP_NODShiLtJ_P0093308 protein_coding protein_coding MGP_NODShiLtJ_T0091201.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36118732 36121995 + MGP_NODShiLtJ_P0091201 Kirrel3 protein_coding protein_coding MGP_NODShiLtJ_T0091202.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36118963 36143751 + Kirrel3 protein_coding processed_transcript MGP_NODShiLtJ_T0091203.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36118964 36685659 + MGP_NODShiLtJ_P0091203 Kirrel3 protein_coding protein_coding MGP_NODShiLtJ_T0091204.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36121569 36687095 + MGP_NODShiLtJ_P0091204 Kirrel3 protein_coding protein_coding MGP_NODShiLtJ_T0091205.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36121631 36681258 + MGP_NODShiLtJ_P0091205 Kirrel3 protein_coding protein_coding MGP_NODShiLtJ_T0091206.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36121631 36687095 + MGP_NODShiLtJ_P0091206 Kirrel3 protein_coding protein_coding MGP_NODShiLtJ_T0091207.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36121664 36686689 + MGP_NODShiLtJ_P0091207 Kirrel3 protein_coding protein_coding MGP_NODShiLtJ_T0091208.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36121772 36686689 + MGP_NODShiLtJ_P0091208 Kirrel3 protein_coding protein_coding MGP_NODShiLtJ_T0091209.1 MGP_NODShiLtJ_G0034326.1 mouse_genomes_project 9 36666842 36681256 + MGP_NODShiLtJ_P0091209 Kirrel3 protein_coding protein_coding MGP_NODShiLtJ_T0005372.1 MGP_NODShiLtJ_G0004548.1 mouse_genomes_project 9 45069444 45080788 + Gm16214 antisense antisense MGP_NODShiLtJ_T0091933.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57550278 57607769 - MGP_NODShiLtJ_P0091933 Cul5 protein_coding protein_coding MGP_NODShiLtJ_T0091934.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57550278 57605261 - MGP_NODShiLtJ_P0091934 Cul5 protein_coding protein_coding MGP_NODShiLtJ_T0091935.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57550343 57605040 - MGP_NODShiLtJ_P0091935 Cul5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091936.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57552296 57557730 - Cul5 protein_coding retained_intron MGP_NODShiLtJ_T0091937.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57552720 57605265 - MGP_NODShiLtJ_P0091937 Cul5 protein_coding protein_coding MGP_NODShiLtJ_T0091938.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57564601 57583657 - Cul5 protein_coding retained_intron MGP_NODShiLtJ_T0091939.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57569291 57605241 - Cul5 protein_coding retained_intron MGP_NODShiLtJ_T0091940.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57579042 57583753 - Cul5 protein_coding retained_intron MGP_NODShiLtJ_T0091941.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57583511 57596595 - Cul5 protein_coding processed_transcript MGP_NODShiLtJ_T0091942.1 MGP_NODShiLtJ_G0034612.1 mouse_genomes_project 9 57593266 57604826 - MGP_NODShiLtJ_P0091942 Cul5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0011000.1 MGP_NODShiLtJ_G0009133.1 mouse_genomes_project 9 130780416 130780506 + Mir26a-1 miRNA miRNA MGP_NODShiLtJ_T0091922.1 MGP_NODShiLtJ_G0034608.1 mouse_genomes_project 9 57316339 57343855 + MGP_NODShiLtJ_P0091922 4930550C14Rik protein_coding protein_coding MGP_NODShiLtJ_T0002403.1 MGP_NODShiLtJ_G0002312.1 mouse_genomes_project 9 115398842 115400250 + TEC TEC MGP_NODShiLtJ_T0093781.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117827584 117969241 + MGP_NODShiLtJ_P0093781 Cacna2d2 protein_coding protein_coding MGP_NODShiLtJ_T0093782.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117827584 117969241 + MGP_NODShiLtJ_P0093782 Cacna2d2 protein_coding protein_coding MGP_NODShiLtJ_T0093783.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117827825 117968889 + MGP_NODShiLtJ_P0093783 Cacna2d2 protein_coding protein_coding MGP_NODShiLtJ_T0093784.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117827825 117969241 + MGP_NODShiLtJ_P0093784 Cacna2d2 protein_coding protein_coding MGP_NODShiLtJ_T0093785.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117828002 117969242 + MGP_NODShiLtJ_P0093785 Cacna2d2 protein_coding protein_coding MGP_NODShiLtJ_T0093786.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117828027 117967386 + MGP_NODShiLtJ_P0093786 Cacna2d2 protein_coding protein_coding MGP_NODShiLtJ_T0093787.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117942544 117950453 + Cacna2d2 protein_coding processed_transcript MGP_NODShiLtJ_T0093788.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117946202 117950815 + Cacna2d2 protein_coding processed_transcript MGP_NODShiLtJ_T0093789.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117961432 117963406 + Cacna2d2 protein_coding retained_intron MGP_NODShiLtJ_T0093790.1 MGP_NODShiLtJ_G0035051.1 mouse_genomes_project 9 117966578 117967489 + Cacna2d2 protein_coding retained_intron MGP_NODShiLtJ_T0094196.1 MGP_NODShiLtJ_G0035109.1 mouse_genomes_project 9 119233794 119237272 + Slc25a20 protein_coding retained_intron MGP_NODShiLtJ_T0094197.1 MGP_NODShiLtJ_G0035109.1 mouse_genomes_project 9 119233804 119259628 + MGP_NODShiLtJ_P0094197 Slc25a20 protein_coding protein_coding MGP_NODShiLtJ_T0094198.1 MGP_NODShiLtJ_G0035109.1 mouse_genomes_project 9 119244805 119255250 + Slc25a20 protein_coding retained_intron MGP_NODShiLtJ_T0100903.1 MGP_NODShiLtJ_G0039297.1 mouse_genomes_project 9 83079973 83080093 - Gm22938 snoRNA snoRNA MGP_NODShiLtJ_T0016018.1 MGP_NODShiLtJ_G0014126.1 mouse_genomes_project 9 106769086 106770923 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009278.1 MGP_NODShiLtJ_G0007445.1 mouse_genomes_project 9 134943285 134962628 - A530083I20Rik lincRNA lincRNA MGP_NODShiLtJ_T0009279.1 MGP_NODShiLtJ_G0007445.1 mouse_genomes_project 9 134953576 134962614 - A530083I20Rik lincRNA lincRNA MGP_NODShiLtJ_T0090975.1 MGP_NODShiLtJ_G0034245.1 mouse_genomes_project 9 21533292 21543283 + MGP_NODShiLtJ_P0090975 Atg4d protein_coding protein_coding MGP_NODShiLtJ_T0010952.1 MGP_NODShiLtJ_G0009085.1 mouse_genomes_project 9 47608959 47609025 + Mir7085 miRNA miRNA MGP_NODShiLtJ_T0092626.1 MGP_NODShiLtJ_G0034804.1 mouse_genomes_project 9 76816819 76913888 + MGP_NODShiLtJ_P0092626 Aldh1a2 protein_coding protein_coding MGP_NODShiLtJ_T0091562.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47336238 47429808 - MGP_NODShiLtJ_P0091562 Cbl protein_coding protein_coding MGP_NODShiLtJ_T0091563.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47336239 47429748 - MGP_NODShiLtJ_P0091563 Cbl protein_coding protein_coding MGP_NODShiLtJ_T0091564.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47336244 47340338 - Cbl protein_coding processed_transcript MGP_NODShiLtJ_T0091565.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47346586 47429743 - MGP_NODShiLtJ_P0091565 Cbl protein_coding protein_coding MGP_NODShiLtJ_T0091566.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47348203 47349403 - MGP_NODShiLtJ_P0091566 Cbl protein_coding protein_coding MGP_NODShiLtJ_T0091567.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47348762 47349376 - Cbl protein_coding retained_intron MGP_NODShiLtJ_T0091568.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47348922 47352202 - Cbl protein_coding retained_intron MGP_NODShiLtJ_T0091569.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47355348 47359193 - MGP_NODShiLtJ_P0091569 Cbl protein_coding protein_coding MGP_NODShiLtJ_T0091570.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47364081 47382133 - Cbl protein_coding processed_transcript MGP_NODShiLtJ_T0091571.1 MGP_NODShiLtJ_G0034493.1 mouse_genomes_project 9 47368431 47429303 - MGP_NODShiLtJ_P0091571 Cbl protein_coding protein_coding MGP_NODShiLtJ_T0009187.1 MGP_NODShiLtJ_G0007375.1 mouse_genomes_project 9 78259066 78292300 - lincRNA lincRNA MGP_NODShiLtJ_T0092046.1 MGP_NODShiLtJ_G0034649.1 mouse_genomes_project 9 60825602 60895552 - MGP_NODShiLtJ_P0092046 Lingo1 protein_coding protein_coding MGP_NODShiLtJ_T0092047.1 MGP_NODShiLtJ_G0034649.1 mouse_genomes_project 9 60826215 60842559 - MGP_NODShiLtJ_P0092047 Lingo1 protein_coding protein_coding MGP_NODShiLtJ_T0092048.1 MGP_NODShiLtJ_G0034649.1 mouse_genomes_project 9 60826232 60858273 - MGP_NODShiLtJ_P0092048 Lingo1 protein_coding protein_coding MGP_NODShiLtJ_T0091413.1 MGP_NODShiLtJ_G0034417.1 mouse_genomes_project 9 41186118 41187186 + MGP_NODShiLtJ_P0091413 Olfr923 protein_coding protein_coding MGP_NODShiLtJ_T0098118.1 MGP_NODShiLtJ_G0036530.1 mouse_genomes_project 9 127106648 127106767 - n-R5s92 rRNA rRNA MGP_NODShiLtJ_T0015903.1 MGP_NODShiLtJ_G0014011.1 mouse_genomes_project 9 13367766 13371624 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092265.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66101484 66147616 + MGP_NODShiLtJ_P0092265 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092266.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66101501 66147024 + MGP_NODShiLtJ_P0092266 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092267.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66101977 66147606 + MGP_NODShiLtJ_P0092267 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092268.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102500 66138480 + MGP_NODShiLtJ_P0092268 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092269.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102504 66146956 + MGP_NODShiLtJ_P0092269 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092270.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102535 66136554 + MGP_NODShiLtJ_P0092270 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092271.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102536 66147609 + MGP_NODShiLtJ_P0092271 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092272.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102557 66145835 + MGP_NODShiLtJ_P0092272 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092273.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102557 66145835 + MGP_NODShiLtJ_P0092273 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092274.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102601 66130996 + MGP_NODShiLtJ_P0092274 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092275.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102633 66146095 + MGP_NODShiLtJ_P0092275 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092276.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66102791 66146095 + MGP_NODShiLtJ_P0092276 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092277.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66103449 66123741 + MGP_NODShiLtJ_P0092277 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092278.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66104649 66146095 + MGP_NODShiLtJ_P0092278 Tle3 protein_coding protein_coding MGP_NODShiLtJ_T0092279.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66130962 66139249 + Tle3 protein_coding processed_transcript MGP_NODShiLtJ_T0092280.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66131564 66146954 + Tle3 protein_coding retained_intron MGP_NODShiLtJ_T0092281.1 MGP_NODShiLtJ_G0034712.1 mouse_genomes_project 9 66139051 66147538 + Tle3 protein_coding processed_transcript MGP_NODShiLtJ_T0093245.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105629779 105774672 + MGP_NODShiLtJ_P0093245 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093246.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105629798 105774679 + MGP_NODShiLtJ_P0093246 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093247.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105629810 105775689 + MGP_NODShiLtJ_P0093247 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093248.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105629842 105686975 + Tfdp2 protein_coding processed_transcript MGP_NODShiLtJ_T0093249.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105635606 105750894 + MGP_NODShiLtJ_P0093249 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093250.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105699132 105766139 + MGP_NODShiLtJ_P0093250 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093251.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105699169 105743659 + MGP_NODShiLtJ_P0093251 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093252.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105699186 105774675 + MGP_NODShiLtJ_P0093252 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093253.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105699712 105775613 + MGP_NODShiLtJ_P0093253 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093254.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105744293 105747440 + Tfdp2 protein_coding retained_intron MGP_NODShiLtJ_T0093255.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105760659 105763807 + Tfdp2 protein_coding retained_intron MGP_NODShiLtJ_T0093256.1 MGP_NODShiLtJ_G0034943.1 mouse_genomes_project 9 105766122 105774611 + MGP_NODShiLtJ_P0093256 Tfdp2 protein_coding protein_coding MGP_NODShiLtJ_T0093336.1 MGP_NODShiLtJ_G0034967.1 mouse_genomes_project 9 108948122 108955938 - MGP_NODShiLtJ_P0093336 Faiml protein_coding protein_coding MGP_NODShiLtJ_T0093337.1 MGP_NODShiLtJ_G0034967.1 mouse_genomes_project 9 108948214 108955070 - MGP_NODShiLtJ_P0093337 Faiml protein_coding protein_coding MGP_NODShiLtJ_T0100928.1 MGP_NODShiLtJ_G0039322.1 mouse_genomes_project 9 131078841 131078970 - Gm22729 snoRNA snoRNA MGP_NODShiLtJ_T0015922.1 MGP_NODShiLtJ_G0014030.1 mouse_genomes_project 9 38468737 38469129 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092396.1 MGP_NODShiLtJ_G0034742.1 mouse_genomes_project 9 69954067 69982915 - MGP_NODShiLtJ_P0092396 Slc24a1 protein_coding protein_coding MGP_NODShiLtJ_T0091374.1 MGP_NODShiLtJ_G0034384.1 mouse_genomes_project 9 40168720 40169650 + MGP_NODShiLtJ_P0091374 Olfr885 protein_coding protein_coding MGP_NODShiLtJ_T0094910.1 MGP_NODShiLtJ_G0035282.1 mouse_genomes_project 9 135923446 135987969 - MGP_NODShiLtJ_P0094910 Fyco1 protein_coding protein_coding MGP_NODShiLtJ_T0094911.1 MGP_NODShiLtJ_G0035282.1 mouse_genomes_project 9 135923822 135987636 - MGP_NODShiLtJ_P0094911 Fyco1 protein_coding protein_coding MGP_NODShiLtJ_T0094913.1 MGP_NODShiLtJ_G0035282.1 mouse_genomes_project 9 135965216 135987951 - MGP_NODShiLtJ_P0094913 Fyco1 protein_coding protein_coding MGP_NODShiLtJ_T0094914.1 MGP_NODShiLtJ_G0035282.1 mouse_genomes_project 9 135974251 135987956 - Fyco1 protein_coding retained_intron MGP_NODShiLtJ_T0005364.1 MGP_NODShiLtJ_G0004540.1 mouse_genomes_project 9 24958496 25041760 + Gm10701 antisense antisense MGP_NODShiLtJ_T0093310.1 MGP_NODShiLtJ_G0034955.1 mouse_genomes_project 9 108053834 108078711 + MGP_NODShiLtJ_P0093310 Rbp1 protein_coding protein_coding MGP_NODShiLtJ_T0100858.1 MGP_NODShiLtJ_G0039252.1 mouse_genomes_project 9 14296335 14296458 + Gm25500 snoRNA snoRNA MGP_NODShiLtJ_T0005363.1 MGP_NODShiLtJ_G0004539.1 mouse_genomes_project 9 24916053 24920212 - Gm15600 antisense antisense MGP_NODShiLtJ_T0094442.1 MGP_NODShiLtJ_G0035148.1 mouse_genomes_project 9 121502311 121505629 - MGP_NODShiLtJ_P0094442 Nradd protein_coding protein_coding MGP_NODShiLtJ_T0094443.1 MGP_NODShiLtJ_G0035148.1 mouse_genomes_project 9 121502684 121504499 - MGP_NODShiLtJ_P0094443 Nradd protein_coding protein_coding MGP_NODShiLtJ_T0094444.1 MGP_NODShiLtJ_G0035148.1 mouse_genomes_project 9 121503061 121505555 - MGP_NODShiLtJ_P0094444 Nradd protein_coding protein_coding MGP_NODShiLtJ_T0094445.1 MGP_NODShiLtJ_G0035148.1 mouse_genomes_project 9 121503756 121505608 - Nradd protein_coding retained_intron MGP_NODShiLtJ_T0092212.1 MGP_NODShiLtJ_G0034700.1 mouse_genomes_project 9 64139456 64171256 + MGP_NODShiLtJ_P0092212 Celf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092213.1 MGP_NODShiLtJ_G0034700.1 mouse_genomes_project 9 64139731 64171256 + MGP_NODShiLtJ_P0092213 Celf6 protein_coding protein_coding MGP_NODShiLtJ_T0092214.1 MGP_NODShiLtJ_G0034700.1 mouse_genomes_project 9 64139731 64171256 + MGP_NODShiLtJ_P0092214 Celf6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092215.1 MGP_NODShiLtJ_G0034700.1 mouse_genomes_project 9 64139917 64168749 + MGP_NODShiLtJ_P0092215 Celf6 protein_coding protein_coding MGP_NODShiLtJ_T0092216.1 MGP_NODShiLtJ_G0034700.1 mouse_genomes_project 9 64164120 64164874 + Celf6 protein_coding retained_intron MGP_NODShiLtJ_T0092217.1 MGP_NODShiLtJ_G0034700.1 mouse_genomes_project 9 64165495 64168524 + Celf6 protein_coding retained_intron MGP_NODShiLtJ_T0094682.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130803499 130822179 + Vill protein_coding retained_intron MGP_NODShiLtJ_T0094683.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130803499 130808774 + Vill protein_coding retained_intron MGP_NODShiLtJ_T0094684.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130803499 130822173 + MGP_NODShiLtJ_P0094684 Vill protein_coding protein_coding MGP_NODShiLtJ_T0094685.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130803523 130821980 + MGP_NODShiLtJ_P0094685 Vill protein_coding protein_coding MGP_NODShiLtJ_T0094686.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130803586 130809145 + MGP_NODShiLtJ_P0094686 Vill protein_coding protein_coding MGP_NODShiLtJ_T0094687.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130814086 130821980 + MGP_NODShiLtJ_P0094687 Vill protein_coding protein_coding MGP_NODShiLtJ_T0094688.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130814092 130821991 + MGP_NODShiLtJ_P0094688 Vill protein_coding protein_coding MGP_NODShiLtJ_T0094689.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130814093 130820695 + MGP_NODShiLtJ_P0094689 Vill protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094690.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130814096 130817439 + MGP_NODShiLtJ_P0094690 Vill protein_coding protein_coding MGP_NODShiLtJ_T0094691.1 MGP_NODShiLtJ_G0035207.1 mouse_genomes_project 9 130814120 130815980 + Vill protein_coding processed_transcript MGP_NODShiLtJ_T0093758.1 MGP_NODShiLtJ_G0035047.1 mouse_genomes_project 9 117670268 117708930 - MGP_NODShiLtJ_P0093758 Mapkapk3 protein_coding protein_coding MGP_NODShiLtJ_T0093759.1 MGP_NODShiLtJ_G0035047.1 mouse_genomes_project 9 117670276 117708800 - Mapkapk3 protein_coding retained_intron MGP_NODShiLtJ_T0093760.1 MGP_NODShiLtJ_G0035047.1 mouse_genomes_project 9 117671386 117672633 - Mapkapk3 protein_coding retained_intron MGP_NODShiLtJ_T0093761.1 MGP_NODShiLtJ_G0035047.1 mouse_genomes_project 9 117671525 117708397 - MGP_NODShiLtJ_P0093761 Mapkapk3 protein_coding protein_coding MGP_NODShiLtJ_T0093762.1 MGP_NODShiLtJ_G0035047.1 mouse_genomes_project 9 117674118 117677245 - Mapkapk3 protein_coding processed_transcript MGP_NODShiLtJ_T0093763.1 MGP_NODShiLtJ_G0035047.1 mouse_genomes_project 9 117674867 117708832 - Mapkapk3 protein_coding retained_intron MGP_NODShiLtJ_T0093764.1 MGP_NODShiLtJ_G0035047.1 mouse_genomes_project 9 117679033 117697592 - MGP_NODShiLtJ_P0093764 Mapkapk3 protein_coding protein_coding MGP_NODShiLtJ_T0093765.1 MGP_NODShiLtJ_G0035047.1 mouse_genomes_project 9 117702768 117708832 - Mapkapk3 protein_coding processed_transcript MGP_NODShiLtJ_T0091655.1 MGP_NODShiLtJ_G0034521.1 mouse_genomes_project 9 48195920 48203401 - MGP_NODShiLtJ_P0091655 Atp5l protein_coding protein_coding MGP_NODShiLtJ_T0093613.1 MGP_NODShiLtJ_G0035017.1 mouse_genomes_project 9 115943808 116092697 - MGP_NODShiLtJ_P0093613 Col6a6 protein_coding protein_coding MGP_NODShiLtJ_T0093614.1 MGP_NODShiLtJ_G0035017.1 mouse_genomes_project 9 115943888 116052851 - MGP_NODShiLtJ_P0093614 Col6a6 protein_coding protein_coding MGP_NODShiLtJ_T0093615.1 MGP_NODShiLtJ_G0035017.1 mouse_genomes_project 9 116037528 116074266 - MGP_NODShiLtJ_P0093615 Col6a6 protein_coding protein_coding MGP_NODShiLtJ_T0090644.1 MGP_NODShiLtJ_G0034107.1 mouse_genomes_project 9 227405 324595 + MGP_NODShiLtJ_P0090644 Cwf19l2 protein_coding protein_coding MGP_NODShiLtJ_T0097852.1 MGP_NODShiLtJ_G0036264.1 mouse_genomes_project 9 74263939 74264371 + pseudogene pseudogene MGP_NODShiLtJ_T0092607.1 MGP_NODShiLtJ_G0034798.1 mouse_genomes_project 9 76100970 76157350 + MGP_NODShiLtJ_P0092607 protein_coding protein_coding MGP_NODShiLtJ_T0091049.1 MGP_NODShiLtJ_G0034272.1 mouse_genomes_project 9 22386015 22397919 + MGP_NODShiLtJ_P0091049 Prkcsh protein_coding protein_coding MGP_NODShiLtJ_T0091050.1 MGP_NODShiLtJ_G0034272.1 mouse_genomes_project 9 22386015 22397919 + MGP_NODShiLtJ_P0091050 Prkcsh protein_coding protein_coding MGP_NODShiLtJ_T0002337.1 MGP_NODShiLtJ_G0002247.1 mouse_genomes_project 9 79459242 79461969 - TEC TEC MGP_NODShiLtJ_T0090646.1 MGP_NODShiLtJ_G0034109.1 mouse_genomes_project 9 1419158 1436504 - MGP_NODShiLtJ_P0090646 Aasdhppt protein_coding protein_coding MGP_NODShiLtJ_T0090867.1 MGP_NODShiLtJ_G0034195.1 mouse_genomes_project 9 19098927 19100591 - MGP_NODShiLtJ_P0090867 Olfr847 protein_coding protein_coding MGP_NODShiLtJ_T0092910.1 MGP_NODShiLtJ_G0034871.1 mouse_genomes_project 9 86468848 86482846 - MGP_NODShiLtJ_P0092910 protein_coding protein_coding MGP_NODShiLtJ_T0092911.1 MGP_NODShiLtJ_G0034871.1 mouse_genomes_project 9 86468848 86614688 - MGP_NODShiLtJ_P0092911 protein_coding protein_coding MGP_NODShiLtJ_T0092912.1 MGP_NODShiLtJ_G0034871.1 mouse_genomes_project 9 86471614 86614890 - MGP_NODShiLtJ_P0092912 protein_coding protein_coding MGP_NODShiLtJ_T0092913.1 MGP_NODShiLtJ_G0034871.1 mouse_genomes_project 9 86579221 86614890 - protein_coding retained_intron MGP_NODShiLtJ_T0092914.1 MGP_NODShiLtJ_G0034871.1 mouse_genomes_project 9 86605978 86615001 - protein_coding retained_intron MGP_NODShiLtJ_T0092915.1 MGP_NODShiLtJ_G0034871.1 mouse_genomes_project 9 86611085 86614664 - protein_coding retained_intron MGP_NODShiLtJ_T0010983.1 MGP_NODShiLtJ_G0009116.1 mouse_genomes_project 9 116479346 116479434 + Mirlet7g miRNA miRNA MGP_NODShiLtJ_T0092110.1 MGP_NODShiLtJ_G0034674.1 mouse_genomes_project 9 62047359 62054355 + MGP_NODShiLtJ_P0092110 Cyp1a1 protein_coding protein_coding MGP_NODShiLtJ_T0094724.1 MGP_NODShiLtJ_G0035219.1 mouse_genomes_project 9 131232033 131257911 + MGP_NODShiLtJ_P0094724 Exog protein_coding protein_coding MGP_NODShiLtJ_T0094725.1 MGP_NODShiLtJ_G0035219.1 mouse_genomes_project 9 131232061 131256624 + MGP_NODShiLtJ_P0094725 Exog protein_coding protein_coding MGP_NODShiLtJ_T0091394.1 MGP_NODShiLtJ_G0034404.1 mouse_genomes_project 9 40779066 40779999 + MGP_NODShiLtJ_P0091394 Olfr907 protein_coding protein_coding MGP_NODShiLtJ_T0009182.1 MGP_NODShiLtJ_G0007371.1 mouse_genomes_project 9 75239335 75324062 + B230323A14Rik lincRNA lincRNA MGP_NODShiLtJ_T0009183.1 MGP_NODShiLtJ_G0007371.1 mouse_genomes_project 9 75241785 75323417 + B230323A14Rik lincRNA lincRNA MGP_NODShiLtJ_T0009252.1 MGP_NODShiLtJ_G0007428.1 mouse_genomes_project 9 119127882 119129524 + 4833445I07Rik lincRNA lincRNA MGP_NODShiLtJ_T0009253.1 MGP_NODShiLtJ_G0007428.1 mouse_genomes_project 9 119128242 119129124 + 4833445I07Rik lincRNA lincRNA MGP_NODShiLtJ_T0092795.1 MGP_NODShiLtJ_G0034834.1 mouse_genomes_project 9 81412788 81416635 + MGP_NODShiLtJ_P0092795 Bcl2l10 protein_coding protein_coding MGP_NODShiLtJ_T0093983.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118472715 118479903 + MGP_NODShiLtJ_P0093983 Cdhr4 protein_coding protein_coding MGP_NODShiLtJ_T0093984.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118475908 118478281 + MGP_NODShiLtJ_P0093984 Cdhr4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093985.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118475944 118476793 + Cdhr4 protein_coding retained_intron MGP_NODShiLtJ_T0093986.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118475950 118479891 + Cdhr4 protein_coding retained_intron MGP_NODShiLtJ_T0093987.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118475974 118476577 + Cdhr4 protein_coding retained_intron MGP_NODShiLtJ_T0093988.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118475981 118479894 + Cdhr4 protein_coding retained_intron MGP_NODShiLtJ_T0093989.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118476001 118477149 + Cdhr4 protein_coding retained_intron MGP_NODShiLtJ_T0093990.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118476124 118477881 + Cdhr4 protein_coding processed_transcript MGP_NODShiLtJ_T0093991.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118476162 118479903 + MGP_NODShiLtJ_P0093991 Cdhr4 protein_coding protein_coding MGP_NODShiLtJ_T0093992.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118476216 118477376 + Cdhr4 protein_coding retained_intron MGP_NODShiLtJ_T0093994.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118476834 118479898 + MGP_NODShiLtJ_P0093994 Cdhr4 protein_coding protein_coding MGP_NODShiLtJ_T0093995.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118477590 118479899 + MGP_NODShiLtJ_P0093995 Cdhr4 protein_coding protein_coding MGP_NODShiLtJ_T0093996.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118477811 118479896 + MGP_NODShiLtJ_P0093996 Cdhr4 protein_coding protein_coding MGP_NODShiLtJ_T0093997.1 MGP_NODShiLtJ_G0035078.1 mouse_genomes_project 9 118477896 118479898 + MGP_NODShiLtJ_P0093997 Cdhr4 protein_coding protein_coding MGP_NODShiLtJ_T0091970.1 MGP_NODShiLtJ_G0034626.1 mouse_genomes_project 9 58717022 58732911 + MGP_NODShiLtJ_P0091970 Dnaja4 protein_coding protein_coding MGP_NODShiLtJ_T0091971.1 MGP_NODShiLtJ_G0034626.1 mouse_genomes_project 9 58717663 58727486 + MGP_NODShiLtJ_P0091971 Dnaja4 protein_coding protein_coding MGP_NODShiLtJ_T0091972.1 MGP_NODShiLtJ_G0034626.1 mouse_genomes_project 9 58717708 58734465 + MGP_NODShiLtJ_P0091972 Dnaja4 protein_coding protein_coding MGP_NODShiLtJ_T0093115.1 MGP_NODShiLtJ_G0034914.1 mouse_genomes_project 9 97456380 97482454 + MGP_NODShiLtJ_P0093115 Gm29094 protein_coding protein_coding MGP_NODShiLtJ_T0093189.1 MGP_NODShiLtJ_G0034931.1 mouse_genomes_project 9 101517340 101589372 + MGP_NODShiLtJ_P0093189 Plod2 protein_coding protein_coding MGP_NODShiLtJ_T0093190.1 MGP_NODShiLtJ_G0034931.1 mouse_genomes_project 9 101517381 101589364 + MGP_NODShiLtJ_P0093190 Plod2 protein_coding protein_coding MGP_NODShiLtJ_T0093191.1 MGP_NODShiLtJ_G0034931.1 mouse_genomes_project 9 101550854 101567930 + Plod2 protein_coding retained_intron MGP_NODShiLtJ_T0093192.1 MGP_NODShiLtJ_G0034931.1 mouse_genomes_project 9 101571590 101577312 + Plod2 protein_coding retained_intron MGP_NODShiLtJ_T0093193.1 MGP_NODShiLtJ_G0034931.1 mouse_genomes_project 9 101577587 101578863 + Plod2 protein_coding retained_intron MGP_NODShiLtJ_T0010930.1 MGP_NODShiLtJ_G0009063.1 mouse_genomes_project 9 7973514 7973605 + Mir6237 miRNA miRNA MGP_NODShiLtJ_T0005410.1 MGP_NODShiLtJ_G0004571.1 mouse_genomes_project 9 74945549 74948147 - Gm16144 antisense antisense MGP_NODShiLtJ_T0010970.1 MGP_NODShiLtJ_G0009103.1 mouse_genomes_project 9 73058107 73058186 - Mir7242 miRNA miRNA MGP_NODShiLtJ_T0091040.1 MGP_NODShiLtJ_G0034266.1 mouse_genomes_project 9 22298040 22307652 + MGP_NODShiLtJ_P0091040 Ccdc159 protein_coding protein_coding MGP_NODShiLtJ_T0091041.1 MGP_NODShiLtJ_G0034266.1 mouse_genomes_project 9 22298040 22307652 + MGP_NODShiLtJ_P0091041 Ccdc159 protein_coding protein_coding MGP_NODShiLtJ_T0010995.1 MGP_NODShiLtJ_G0009128.1 mouse_genomes_project 9 121833903 121833980 + Gm24269 miRNA miRNA MGP_NODShiLtJ_T0002404.1 MGP_NODShiLtJ_G0002313.1 mouse_genomes_project 9 115990501 115991126 + TEC TEC MGP_NODShiLtJ_T0094891.1 MGP_NODShiLtJ_G0035278.1 mouse_genomes_project 9 135687764 135736465 - MGP_NODShiLtJ_P0094891 Slc6a20b protein_coding protein_coding MGP_NODShiLtJ_T0094892.1 MGP_NODShiLtJ_G0035278.1 mouse_genomes_project 9 135688764 135732464 - Slc6a20b protein_coding processed_transcript MGP_NODShiLtJ_T0094893.1 MGP_NODShiLtJ_G0035278.1 mouse_genomes_project 9 135688770 135736227 - MGP_NODShiLtJ_P0094893 Slc6a20b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094894.1 MGP_NODShiLtJ_G0035278.1 mouse_genomes_project 9 135701194 135736183 - MGP_NODShiLtJ_P0094894 Slc6a20b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094895.1 MGP_NODShiLtJ_G0035278.1 mouse_genomes_project 9 135702798 135736401 - Slc6a20b protein_coding processed_transcript MGP_NODShiLtJ_T0091777.1 MGP_NODShiLtJ_G0034557.1 mouse_genomes_project 9 51895515 51939112 + MGP_NODShiLtJ_P0091777 Nxpe4 protein_coding protein_coding MGP_NODShiLtJ_T0094621.1 MGP_NODShiLtJ_G0035187.1 mouse_genomes_project 9 125874295 125932752 - MGP_NODShiLtJ_P0094621 Trim71 protein_coding protein_coding MGP_NODShiLtJ_T0091042.1 MGP_NODShiLtJ_G0034267.1 mouse_genomes_project 9 22308816 22323513 + MGP_NODShiLtJ_P0091042 Plppr2 protein_coding protein_coding MGP_NODShiLtJ_T0091043.1 MGP_NODShiLtJ_G0034267.1 mouse_genomes_project 9 22310214 22322619 + MGP_NODShiLtJ_P0091043 Plppr2 protein_coding protein_coding MGP_NODShiLtJ_T0100873.1 MGP_NODShiLtJ_G0039267.1 mouse_genomes_project 9 26353433 26353542 - Gm25861 snoRNA snoRNA MGP_NODShiLtJ_T0005373.1 MGP_NODShiLtJ_G0004549.1 mouse_genomes_project 9 45542032 45573059 + Gm16322 antisense antisense MGP_NODShiLtJ_T0005374.1 MGP_NODShiLtJ_G0004549.1 mouse_genomes_project 9 45543051 45569808 + Gm16322 antisense antisense MGP_NODShiLtJ_T0009184.1 MGP_NODShiLtJ_G0007372.1 mouse_genomes_project 9 75698792 75729368 - Gm26849 lincRNA lincRNA MGP_NODShiLtJ_T0091917.1 MGP_NODShiLtJ_G0034605.1 mouse_genomes_project 9 56969709 57141489 - MGP_NODShiLtJ_P0091917 Ddx10 protein_coding protein_coding MGP_NODShiLtJ_T0015961.1 MGP_NODShiLtJ_G0014069.1 mouse_genomes_project 9 82982154 82982530 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010986.1 MGP_NODShiLtJ_G0009119.1 mouse_genomes_project 9 118597087 118597205 - miRNA miRNA MGP_NODShiLtJ_T0009216.1 MGP_NODShiLtJ_G0007399.1 mouse_genomes_project 9 99978190 99982447 + Gm28652 lincRNA lincRNA MGP_NODShiLtJ_T0091363.1 MGP_NODShiLtJ_G0034374.1 mouse_genomes_project 9 39726903 39743370 - MGP_NODShiLtJ_P0091363 protein_coding protein_coding MGP_NODShiLtJ_T0093993.1 MGP_NODShiLtJ_G0035079.1 mouse_genomes_project 9 118476567 118528379 + Gm20662 protein_coding retained_intron MGP_NODShiLtJ_T0093998.1 MGP_NODShiLtJ_G0035079.1 mouse_genomes_project 9 118478207 118514309 + MGP_NODShiLtJ_P0093998 Gm20662 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093999.1 MGP_NODShiLtJ_G0035079.1 mouse_genomes_project 9 118478245 118514301 + MGP_NODShiLtJ_P0093999 Gm20662 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092860.1 MGP_NODShiLtJ_G0034853.1 mouse_genomes_project 9 84626147 84639344 + MGP_NODShiLtJ_P0092860 Gcm1 protein_coding protein_coding MGP_NODShiLtJ_T0009207.1 MGP_NODShiLtJ_G0007392.1 mouse_genomes_project 9 92491648 92504445 + 4930554C24Rik lincRNA lincRNA MGP_NODShiLtJ_T0091832.1 MGP_NODShiLtJ_G0034583.1 mouse_genomes_project 9 54319156 54344383 - MGP_NODShiLtJ_P0091832 Dlat protein_coding protein_coding MGP_NODShiLtJ_T0091833.1 MGP_NODShiLtJ_G0034583.1 mouse_genomes_project 9 54321051 54328690 - Dlat protein_coding retained_intron MGP_NODShiLtJ_T0091834.1 MGP_NODShiLtJ_G0034583.1 mouse_genomes_project 9 54321979 54330732 - Dlat protein_coding processed_transcript MGP_NODShiLtJ_T0091835.1 MGP_NODShiLtJ_G0034583.1 mouse_genomes_project 9 54324437 54328391 - Dlat protein_coding retained_intron MGP_NODShiLtJ_T0091836.1 MGP_NODShiLtJ_G0034583.1 mouse_genomes_project 9 54324754 54332178 - Dlat protein_coding processed_transcript MGP_NODShiLtJ_T0091837.1 MGP_NODShiLtJ_G0034583.1 mouse_genomes_project 9 54328361 54334445 - Dlat protein_coding retained_intron MGP_NODShiLtJ_T0090937.1 MGP_NODShiLtJ_G0034226.1 mouse_genomes_project 9 21047510 21055656 + MGP_NODShiLtJ_P0090937 Rdh8 protein_coding protein_coding MGP_NODShiLtJ_T0002306.1 MGP_NODShiLtJ_G0002216.1 mouse_genomes_project 9 36061876 36082023 - TEC TEC MGP_NODShiLtJ_T0090770.1 MGP_NODShiLtJ_G0034153.1 mouse_genomes_project 9 13482812 13550617 - MGP_NODShiLtJ_P0090770 Amotl1 protein_coding protein_coding MGP_NODShiLtJ_T0090771.1 MGP_NODShiLtJ_G0034153.1 mouse_genomes_project 9 13490693 13494072 - Amotl1 protein_coding retained_intron MGP_NODShiLtJ_T0090772.1 MGP_NODShiLtJ_G0034153.1 mouse_genomes_project 9 13529580 13551318 - MGP_NODShiLtJ_P0090772 Amotl1 protein_coding protein_coding MGP_NODShiLtJ_T0090773.1 MGP_NODShiLtJ_G0034153.1 mouse_genomes_project 9 13529614 13550421 - MGP_NODShiLtJ_P0090773 Amotl1 protein_coding protein_coding MGP_NODShiLtJ_T0092544.1 MGP_NODShiLtJ_G0034783.1 mouse_genomes_project 9 72511501 72698475 - MGP_NODShiLtJ_P0092544 Tln2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092545.1 MGP_NODShiLtJ_G0034783.1 mouse_genomes_project 9 72511509 72866205 - MGP_NODShiLtJ_P0092545 Tln2 protein_coding protein_coding MGP_NODShiLtJ_T0092546.1 MGP_NODShiLtJ_G0034783.1 mouse_genomes_project 9 72515527 72845988 - MGP_NODShiLtJ_P0092546 Tln2 protein_coding protein_coding MGP_NODShiLtJ_T0009218.1 MGP_NODShiLtJ_G0007401.1 mouse_genomes_project 9 101234087 101236790 - Gm29139 lincRNA lincRNA MGP_NODShiLtJ_T0010963.1 MGP_NODShiLtJ_G0009096.1 mouse_genomes_project 9 66905405 66905482 - Mir5133 miRNA miRNA MGP_NODShiLtJ_T0093394.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110474706 110632206 + MGP_NODShiLtJ_P0093394 Stag1 protein_coding protein_coding MGP_NODShiLtJ_T0093395.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110520670 110714104 + MGP_NODShiLtJ_P0093395 Stag1 protein_coding protein_coding MGP_NODShiLtJ_T0093396.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110520822 110634165 + Stag1 protein_coding retained_intron MGP_NODShiLtJ_T0093397.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110520835 110603326 + Stag1 protein_coding retained_intron MGP_NODShiLtJ_T0093398.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110520835 110603345 + Stag1 protein_coding retained_intron MGP_NODShiLtJ_T0093399.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110520838 110804087 + MGP_NODShiLtJ_P0093399 Stag1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093400.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110520858 110900324 + MGP_NODShiLtJ_P0093400 Stag1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093401.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110520990 110900331 + MGP_NODShiLtJ_P0093401 Stag1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093402.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110520992 110676599 + MGP_NODShiLtJ_P0093402 Stag1 protein_coding protein_coding MGP_NODShiLtJ_T0093403.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110595830 110901480 + MGP_NODShiLtJ_P0093403 Stag1 protein_coding protein_coding MGP_NODShiLtJ_T0093404.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110714016 110900341 + Stag1 protein_coding processed_transcript MGP_NODShiLtJ_T0093405.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110766907 110779837 + Stag1 protein_coding retained_intron MGP_NODShiLtJ_T0093406.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110775709 110899759 + MGP_NODShiLtJ_P0093406 Stag1 protein_coding protein_coding MGP_NODShiLtJ_T0093407.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110778814 110786562 + Stag1 protein_coding retained_intron MGP_NODShiLtJ_T0093408.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110831441 110893196 + MGP_NODShiLtJ_P0093408 Stag1 protein_coding protein_coding MGP_NODShiLtJ_T0093409.1 MGP_NODShiLtJ_G0034980.1 mouse_genomes_project 9 110898693 110902309 + Stag1 protein_coding retained_intron MGP_NODShiLtJ_T0100863.1 MGP_NODShiLtJ_G0039257.1 mouse_genomes_project 9 14299305 14299379 + Gm24357 snoRNA snoRNA MGP_NODShiLtJ_T0093324.1 MGP_NODShiLtJ_G0034960.1 mouse_genomes_project 9 108531178 108532994 + MGP_NODShiLtJ_P0093324 protein_coding protein_coding MGP_NODShiLtJ_T0005396.1 MGP_NODShiLtJ_G0004562.1 mouse_genomes_project 9 62143031 62199028 + antisense antisense MGP_NODShiLtJ_T0005397.1 MGP_NODShiLtJ_G0004562.1 mouse_genomes_project 9 62191012 62199362 + antisense antisense MGP_NODShiLtJ_T0005398.1 MGP_NODShiLtJ_G0004562.1 mouse_genomes_project 9 62192414 62199267 + antisense antisense MGP_NODShiLtJ_T0005420.1 MGP_NODShiLtJ_G0004579.1 mouse_genomes_project 9 85063399 85064603 - 4930542C12Rik antisense antisense MGP_NODShiLtJ_T0099631.1 MGP_NODShiLtJ_G0038025.1 mouse_genomes_project 9 98704935 98705112 + Gm22866 snRNA snRNA MGP_NODShiLtJ_T0015942.1 MGP_NODShiLtJ_G0014050.1 mouse_genomes_project 9 77608125 77608224 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015935.1 MGP_NODShiLtJ_G0014043.1 mouse_genomes_project 9 64345769 64346256 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010987.1 MGP_NODShiLtJ_G0009120.1 mouse_genomes_project 9 119128644 119128764 - Gm24083 miRNA miRNA MGP_NODShiLtJ_T0018401.1 MGP_NODShiLtJ_G0015618.1 mouse_genomes_project 9 96749491 96766858 - processed_transcript antisense MGP_NODShiLtJ_T0018402.1 MGP_NODShiLtJ_G0015618.1 mouse_genomes_project 9 96764091 96766855 - processed_transcript retained_intron MGP_NODShiLtJ_T0018403.1 MGP_NODShiLtJ_G0015618.1 mouse_genomes_project 9 96765178 96766863 - processed_transcript antisense MGP_NODShiLtJ_T0010962.1 MGP_NODShiLtJ_G0009095.1 mouse_genomes_project 9 62621993 62622098 + Mir6385 miRNA miRNA MGP_NODShiLtJ_T0091899.1 MGP_NODShiLtJ_G0034596.1 mouse_genomes_project 9 54931540 54963110 + MGP_NODShiLtJ_P0091899 Pou2af1 protein_coding protein_coding MGP_NODShiLtJ_T0009189.1 MGP_NODShiLtJ_G0007377.1 mouse_genomes_project 9 79038230 79124740 + Gm27211 lincRNA lincRNA MGP_NODShiLtJ_T0093327.1 MGP_NODShiLtJ_G0034963.1 mouse_genomes_project 9 108639207 108640448 + MGP_NODShiLtJ_P0093327 Foxl2 protein_coding protein_coding MGP_NODShiLtJ_T0005467.1 MGP_NODShiLtJ_G0004610.1 mouse_genomes_project 9 116974607 116977242 + Gm28111 antisense antisense MGP_NODShiLtJ_T0094223.1 MGP_NODShiLtJ_G0035113.1 mouse_genomes_project 9 119415381 119442036 + MGP_NODShiLtJ_P0094223 Celsr3 protein_coding protein_coding MGP_NODShiLtJ_T0094224.1 MGP_NODShiLtJ_G0035113.1 mouse_genomes_project 9 119416179 119442043 + MGP_NODShiLtJ_P0094224 Celsr3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094225.1 MGP_NODShiLtJ_G0035113.1 mouse_genomes_project 9 119420801 119421882 + MGP_NODShiLtJ_P0094225 Celsr3 protein_coding protein_coding MGP_NODShiLtJ_T0094226.1 MGP_NODShiLtJ_G0035113.1 mouse_genomes_project 9 119423533 119425636 + Celsr3 protein_coding retained_intron MGP_NODShiLtJ_T0094227.1 MGP_NODShiLtJ_G0035113.1 mouse_genomes_project 9 119431658 119432275 + Celsr3 protein_coding retained_intron MGP_NODShiLtJ_T0094228.1 MGP_NODShiLtJ_G0035113.1 mouse_genomes_project 9 119432284 119432970 + Celsr3 protein_coding retained_intron MGP_NODShiLtJ_T0094229.1 MGP_NODShiLtJ_G0035113.1 mouse_genomes_project 9 119432302 119437816 + MGP_NODShiLtJ_P0094229 Celsr3 protein_coding protein_coding MGP_NODShiLtJ_T0091978.1 MGP_NODShiLtJ_G0034629.1 mouse_genomes_project 9 58894533 58944543 + MGP_NODShiLtJ_P0091978 Ireb2 protein_coding protein_coding MGP_NODShiLtJ_T0091923.1 MGP_NODShiLtJ_G0034609.1 mouse_genomes_project 9 57350190 57460357 - MGP_NODShiLtJ_P0091923 Atm protein_coding protein_coding MGP_NODShiLtJ_T0091924.1 MGP_NODShiLtJ_G0034609.1 mouse_genomes_project 9 57350787 57458980 - MGP_NODShiLtJ_P0091924 Atm protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091925.1 MGP_NODShiLtJ_G0034609.1 mouse_genomes_project 9 57351146 57353604 - Atm protein_coding retained_intron MGP_NODShiLtJ_T0091926.1 MGP_NODShiLtJ_G0034609.1 mouse_genomes_project 9 57356418 57365700 - MGP_NODShiLtJ_P0091926 Atm protein_coding protein_coding MGP_NODShiLtJ_T0091927.1 MGP_NODShiLtJ_G0034609.1 mouse_genomes_project 9 57441049 57460290 - Atm protein_coding retained_intron MGP_NODShiLtJ_T0099636.1 MGP_NODShiLtJ_G0038030.1 mouse_genomes_project 9 112414420 112414523 + Gm22894 snRNA snRNA MGP_NODShiLtJ_T0015967.1 MGP_NODShiLtJ_G0014075.1 mouse_genomes_project 9 83767178 83767580 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094833.1 MGP_NODShiLtJ_G0035255.1 mouse_genomes_project 9 133952279 133980465 + MGP_NODShiLtJ_P0094833 Fam198a protein_coding protein_coding MGP_NODShiLtJ_T0093323.1 MGP_NODShiLtJ_G0034959.1 mouse_genomes_project 9 108507085 108511598 + MGP_NODShiLtJ_P0093323 Prr23a1 protein_coding protein_coding MGP_NODShiLtJ_T0015955.1 MGP_NODShiLtJ_G0014063.1 mouse_genomes_project 9 80595217 80595407 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002356.1 MGP_NODShiLtJ_G0002265.1 mouse_genomes_project 9 95837592 95839421 - TEC TEC MGP_NODShiLtJ_T0094476.1 MGP_NODShiLtJ_G0035154.1 mouse_genomes_project 9 121713269 121718090 + MGP_NODShiLtJ_P0094476 Prss44 protein_coding protein_coding MGP_NODShiLtJ_T0094477.1 MGP_NODShiLtJ_G0035154.1 mouse_genomes_project 9 121713302 121724583 + MGP_NODShiLtJ_P0094477 Prss44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094478.1 MGP_NODShiLtJ_G0035154.1 mouse_genomes_project 9 121714540 121716619 + MGP_NODShiLtJ_P0094478 Prss44 protein_coding protein_coding MGP_NODShiLtJ_T0094479.1 MGP_NODShiLtJ_G0035154.1 mouse_genomes_project 9 121715306 121717039 + Prss44 protein_coding retained_intron MGP_NODShiLtJ_T0092402.1 MGP_NODShiLtJ_G0034746.1 mouse_genomes_project 9 70143470 70182631 + MGP_NODShiLtJ_P0092402 Igdcc4 protein_coding protein_coding MGP_NODShiLtJ_T0092403.1 MGP_NODShiLtJ_G0034746.1 mouse_genomes_project 9 70143519 70180271 + MGP_NODShiLtJ_P0092403 Igdcc4 protein_coding protein_coding MGP_NODShiLtJ_T0091428.1 MGP_NODShiLtJ_G0034432.1 mouse_genomes_project 9 41882940 41883906 - MGP_NODShiLtJ_P0091428 Olfr948 protein_coding protein_coding MGP_NODShiLtJ_T0093333.1 MGP_NODShiLtJ_G0034966.1 mouse_genomes_project 9 108731129 108848218 - MGP_NODShiLtJ_P0093333 Pik3cb protein_coding protein_coding MGP_NODShiLtJ_T0093334.1 MGP_NODShiLtJ_G0034966.1 mouse_genomes_project 9 108732876 108848056 - MGP_NODShiLtJ_P0093334 Pik3cb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093335.1 MGP_NODShiLtJ_G0034966.1 mouse_genomes_project 9 108807788 108848752 - MGP_NODShiLtJ_P0093335 Pik3cb protein_coding protein_coding MGP_NODShiLtJ_T0005393.1 MGP_NODShiLtJ_G0004561.1 mouse_genomes_project 9 61346272 61379461 - Man2c1os antisense antisense MGP_NODShiLtJ_T0005394.1 MGP_NODShiLtJ_G0004561.1 mouse_genomes_project 9 61376274 61379069 - Man2c1os antisense antisense MGP_NODShiLtJ_T0005395.1 MGP_NODShiLtJ_G0004561.1 mouse_genomes_project 9 61378146 61379415 - Man2c1os antisense antisense MGP_NODShiLtJ_T0092854.1 MGP_NODShiLtJ_G0034850.1 mouse_genomes_project 9 84150614 84178157 + MGP_NODShiLtJ_P0092854 Klhl31 protein_coding protein_coding MGP_NODShiLtJ_T0091421.1 MGP_NODShiLtJ_G0034425.1 mouse_genomes_project 9 41498768 41499704 - MGP_NODShiLtJ_P0091421 Olfr937 protein_coding protein_coding MGP_NODShiLtJ_T0091794.1 MGP_NODShiLtJ_G0034568.1 mouse_genomes_project 9 52710966 52714815 + Tmprss5 protein_coding retained_intron MGP_NODShiLtJ_T0091795.1 MGP_NODShiLtJ_G0034568.1 mouse_genomes_project 9 52710966 52725696 + MGP_NODShiLtJ_P0091795 Tmprss5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091796.1 MGP_NODShiLtJ_G0034568.1 mouse_genomes_project 9 52711059 52725102 + MGP_NODShiLtJ_P0091796 Tmprss5 protein_coding protein_coding MGP_NODShiLtJ_T0091797.1 MGP_NODShiLtJ_G0034568.1 mouse_genomes_project 9 52711059 52725704 + MGP_NODShiLtJ_P0091797 Tmprss5 protein_coding protein_coding MGP_NODShiLtJ_T0091798.1 MGP_NODShiLtJ_G0034568.1 mouse_genomes_project 9 52717110 52725696 + MGP_NODShiLtJ_P0091798 Tmprss5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094883.1 MGP_NODShiLtJ_G0035272.1 mouse_genomes_project 9 135223227 135230176 + MGP_NODShiLtJ_P0094883 Clec3b protein_coding protein_coding MGP_NODShiLtJ_T0093664.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116758879 116767733 - MGP_NODShiLtJ_P0093664 Abhd14a protein_coding protein_coding MGP_NODShiLtJ_T0093665.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116758882 116767733 - MGP_NODShiLtJ_P0093665 Abhd14a protein_coding protein_coding MGP_NODShiLtJ_T0093666.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116758884 116764501 - MGP_NODShiLtJ_P0093666 Abhd14a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093667.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116758886 116767618 - MGP_NODShiLtJ_P0093667 Abhd14a protein_coding protein_coding MGP_NODShiLtJ_T0093668.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116758938 116767498 - MGP_NODShiLtJ_P0093668 Abhd14a protein_coding protein_coding MGP_NODShiLtJ_T0093669.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116759210 116765047 - MGP_NODShiLtJ_P0093669 Abhd14a protein_coding protein_coding MGP_NODShiLtJ_T0093670.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116759527 116767675 - MGP_NODShiLtJ_P0093670 Abhd14a protein_coding protein_coding MGP_NODShiLtJ_T0093671.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116759607 116767572 - MGP_NODShiLtJ_P0093671 Abhd14a protein_coding protein_coding MGP_NODShiLtJ_T0093672.1 MGP_NODShiLtJ_G0035029.1 mouse_genomes_project 9 116762201 116762919 - Abhd14a protein_coding retained_intron MGP_NODShiLtJ_T0091275.1 MGP_NODShiLtJ_G0034348.1 mouse_genomes_project 9 37955055 37962551 - MGP_NODShiLtJ_P0091275 protein_coding protein_coding MGP_NODShiLtJ_T0009211.1 MGP_NODShiLtJ_G0007396.1 mouse_genomes_project 9 98135480 98174685 + 4930524O08Rik lincRNA lincRNA MGP_NODShiLtJ_T0009212.1 MGP_NODShiLtJ_G0007396.1 mouse_genomes_project 9 98135905 98147940 + 4930524O08Rik lincRNA lincRNA MGP_NODShiLtJ_T0009213.1 MGP_NODShiLtJ_G0007396.1 mouse_genomes_project 9 98135943 98147282 + 4930524O08Rik lincRNA lincRNA MGP_NODShiLtJ_T0092051.1 MGP_NODShiLtJ_G0034652.1 mouse_genomes_project 9 61135449 61146626 - MGP_NODShiLtJ_P0092051 Snx33 protein_coding protein_coding MGP_NODShiLtJ_T0091357.1 MGP_NODShiLtJ_G0034372.1 mouse_genomes_project 9 39666358 39675119 - Tbrg1 protein_coding retained_intron MGP_NODShiLtJ_T0091358.1 MGP_NODShiLtJ_G0034372.1 mouse_genomes_project 9 39666358 39675218 - MGP_NODShiLtJ_P0091358 Tbrg1 protein_coding protein_coding MGP_NODShiLtJ_T0091359.1 MGP_NODShiLtJ_G0034372.1 mouse_genomes_project 9 39669098 39675064 - Tbrg1 protein_coding retained_intron MGP_NODShiLtJ_T0091360.1 MGP_NODShiLtJ_G0034372.1 mouse_genomes_project 9 39671040 39675074 - Tbrg1 protein_coding retained_intron MGP_NODShiLtJ_T0010999.1 MGP_NODShiLtJ_G0009132.1 mouse_genomes_project 9 129679287 129679382 + Gm22008 miRNA miRNA MGP_NODShiLtJ_T0091044.1 MGP_NODShiLtJ_G0034268.1 mouse_genomes_project 9 22330384 22332399 + MGP_NODShiLtJ_P0091044 Swsap1 protein_coding protein_coding MGP_NODShiLtJ_T0091787.1 MGP_NODShiLtJ_G0034563.1 mouse_genomes_project 9 52216450 52418927 - MGP_NODShiLtJ_P0091787 Zbtb16 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092523.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307773 72331230 - MGP_NODShiLtJ_P0092523 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092524.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307773 72336567 - MGP_NODShiLtJ_P0092524 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092525.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307773 72336706 - MGP_NODShiLtJ_P0092525 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092526.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307775 72331125 - MGP_NODShiLtJ_P0092526 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092527.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307776 72331285 - MGP_NODShiLtJ_P0092527 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092528.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307776 72336509 - MGP_NODShiLtJ_P0092528 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092529.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307789 72336501 - MGP_NODShiLtJ_P0092529 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092530.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307789 72336486 - MGP_NODShiLtJ_P0092530 Tpm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092531.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307798 72336575 - MGP_NODShiLtJ_P0092531 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092532.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72307805 72331101 - MGP_NODShiLtJ_P0092532 Tpm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092533.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72310311 72336472 - MGP_NODShiLtJ_P0092533 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092534.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72310313 72331032 - MGP_NODShiLtJ_P0092534 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092535.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72315182 72336513 - MGP_NODShiLtJ_P0092535 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092536.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72315182 72336564 - MGP_NODShiLtJ_P0092536 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092537.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72315256 72331164 - MGP_NODShiLtJ_P0092537 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092538.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72315279 72336443 - MGP_NODShiLtJ_P0092538 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092539.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72315338 72331056 - MGP_NODShiLtJ_P0092539 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092540.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72316138 72336562 - MGP_NODShiLtJ_P0092540 Tpm1 protein_coding protein_coding MGP_NODShiLtJ_T0092541.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72317210 72320092 - Tpm1 protein_coding processed_transcript MGP_NODShiLtJ_T0092542.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72319486 72336418 - Tpm1 protein_coding retained_intron MGP_NODShiLtJ_T0092543.1 MGP_NODShiLtJ_G0034782.1 mouse_genomes_project 9 72321044 72336491 - Tpm1 protein_coding processed_transcript MGP_NODShiLtJ_T0015968.1 MGP_NODShiLtJ_G0014076.1 mouse_genomes_project 9 84055437 84056638 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009136.1 MGP_NODShiLtJ_G0007335.1 mouse_genomes_project 9 34260721 34281082 + Gm3331 lincRNA lincRNA MGP_NODShiLtJ_T0091460.1 MGP_NODShiLtJ_G0034458.1 mouse_genomes_project 9 42919271 42920813 - MGP_NODShiLtJ_P0091460 Olfr983 protein_coding protein_coding MGP_NODShiLtJ_T0093531.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114288964 114397573 - MGP_NODShiLtJ_P0093531 Dnajc13 protein_coding protein_coding MGP_NODShiLtJ_T0093532.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114289734 114291179 - Dnajc13 protein_coding retained_intron MGP_NODShiLtJ_T0093533.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114289855 114294516 - Dnajc13 protein_coding processed_transcript MGP_NODShiLtJ_T0093534.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114289949 114294774 - Dnajc13 protein_coding retained_intron MGP_NODShiLtJ_T0093535.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114289999 114380084 - MGP_NODShiLtJ_P0093535 Dnajc13 protein_coding protein_coding MGP_NODShiLtJ_T0093536.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114289999 114397561 - MGP_NODShiLtJ_P0093536 Dnajc13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093537.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114294505 114300445 - MGP_NODShiLtJ_P0093537 Dnajc13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093538.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114299757 114302733 - MGP_NODShiLtJ_P0093538 Dnajc13 protein_coding protein_coding MGP_NODShiLtJ_T0093539.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114302442 114306550 - Dnajc13 protein_coding retained_intron MGP_NODShiLtJ_T0093540.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114322037 114326939 - Dnajc13 protein_coding retained_intron MGP_NODShiLtJ_T0093541.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114329067 114341576 - MGP_NODShiLtJ_P0093541 Dnajc13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093542.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114332482 114340476 - Dnajc13 protein_coding retained_intron MGP_NODShiLtJ_T0093543.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114336022 114342972 - Dnajc13 protein_coding retained_intron MGP_NODShiLtJ_T0093544.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114361609 114362249 - Dnajc13 protein_coding retained_intron MGP_NODShiLtJ_T0093545.1 MGP_NODShiLtJ_G0035007.1 mouse_genomes_project 9 114370776 114397546 - Dnajc13 protein_coding retained_intron MGP_NODShiLtJ_T0100902.1 MGP_NODShiLtJ_G0039296.1 mouse_genomes_project 9 80806580 80806723 + Gm22315 snoRNA snoRNA MGP_NODShiLtJ_T0091432.1 MGP_NODShiLtJ_G0034436.1 mouse_genomes_project 9 42224622 42225677 - MGP_NODShiLtJ_P0091432 Olfr959 protein_coding protein_coding MGP_NODShiLtJ_T0092180.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019050 63096949 + MGP_NODShiLtJ_P0092180 Nptn protein_coding protein_coding MGP_NODShiLtJ_T0092181.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019102 63098509 + MGP_NODShiLtJ_P0092181 Nptn protein_coding protein_coding MGP_NODShiLtJ_T0092182.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019184 63086304 + MGP_NODShiLtJ_P0092182 Nptn protein_coding non_stop_decay MGP_NODShiLtJ_T0092183.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019216 63098509 + MGP_NODShiLtJ_P0092183 Nptn protein_coding protein_coding MGP_NODShiLtJ_T0092184.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019217 63096949 + MGP_NODShiLtJ_P0092184 Nptn protein_coding protein_coding MGP_NODShiLtJ_T0092185.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019217 63089432 + MGP_NODShiLtJ_P0092185 Nptn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092186.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019246 63096949 + MGP_NODShiLtJ_P0092186 Nptn protein_coding protein_coding MGP_NODShiLtJ_T0092187.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019251 63097593 + MGP_NODShiLtJ_P0092187 Nptn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092188.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63019254 63089294 + Nptn protein_coding processed_transcript MGP_NODShiLtJ_T0092189.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63073920 63103609 + MGP_NODShiLtJ_P0092189 Nptn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092190.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63073921 63100835 + MGP_NODShiLtJ_P0092190 Nptn protein_coding protein_coding MGP_NODShiLtJ_T0092191.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63095829 63097688 + Nptn protein_coding retained_intron MGP_NODShiLtJ_T0092192.1 MGP_NODShiLtJ_G0034691.1 mouse_genomes_project 9 63097606 63098449 + Nptn protein_coding processed_transcript MGP_NODShiLtJ_T0091656.1 MGP_NODShiLtJ_G0034522.1 mouse_genomes_project 9 48205788 48249478 - MGP_NODShiLtJ_P0091656 Ube4a protein_coding protein_coding MGP_NODShiLtJ_T0091657.1 MGP_NODShiLtJ_G0034522.1 mouse_genomes_project 9 48208505 48249518 - MGP_NODShiLtJ_P0091657 Ube4a protein_coding protein_coding MGP_NODShiLtJ_T0091658.1 MGP_NODShiLtJ_G0034522.1 mouse_genomes_project 9 48215338 48249437 - MGP_NODShiLtJ_P0091658 Ube4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091659.1 MGP_NODShiLtJ_G0034522.1 mouse_genomes_project 9 48215438 48249443 - MGP_NODShiLtJ_P0091659 Ube4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091660.1 MGP_NODShiLtJ_G0034522.1 mouse_genomes_project 9 48229950 48249475 - Ube4a protein_coding retained_intron MGP_NODShiLtJ_T0091661.1 MGP_NODShiLtJ_G0034522.1 mouse_genomes_project 9 48236865 48249472 - MGP_NODShiLtJ_P0091661 Ube4a protein_coding protein_coding MGP_NODShiLtJ_T0091662.1 MGP_NODShiLtJ_G0034522.1 mouse_genomes_project 9 48240198 48249454 - Ube4a protein_coding retained_intron MGP_NODShiLtJ_T0091605.1 MGP_NODShiLtJ_G0034511.1 mouse_genomes_project 9 47697183 47726913 + MGP_NODShiLtJ_P0091605 Bcl9l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091759.1 MGP_NODShiLtJ_G0034553.1 mouse_genomes_project 9 49651437 49670121 - MGP_NODShiLtJ_P0091759 4931429L15Rik protein_coding protein_coding MGP_NODShiLtJ_T0091760.1 MGP_NODShiLtJ_G0034553.1 mouse_genomes_project 9 49652094 49661869 - MGP_NODShiLtJ_P0091760 4931429L15Rik protein_coding protein_coding MGP_NODShiLtJ_T0091761.1 MGP_NODShiLtJ_G0034553.1 mouse_genomes_project 9 49660580 49666222 - MGP_NODShiLtJ_P0091761 4931429L15Rik protein_coding protein_coding MGP_NODShiLtJ_T0009206.1 MGP_NODShiLtJ_G0007391.1 mouse_genomes_project 9 91198689 91200431 + Gm2109 lincRNA lincRNA MGP_NODShiLtJ_T0091733.1 MGP_NODShiLtJ_G0034545.1 mouse_genomes_project 9 49304682 49328177 - MGP_NODShiLtJ_P0091733 Pafah1b2 protein_coding protein_coding MGP_NODShiLtJ_T0002406.1 MGP_NODShiLtJ_G0002315.1 mouse_genomes_project 9 118087277 118089021 - TEC TEC MGP_NODShiLtJ_T0010927.1 MGP_NODShiLtJ_G0009060.1 mouse_genomes_project 9 5689334 5689385 + Mir5618 miRNA miRNA MGP_NODShiLtJ_T0005502.1 MGP_NODShiLtJ_G0004636.1 mouse_genomes_project 9 133827684 133838589 + Gm17163 antisense antisense MGP_NODShiLtJ_T0002415.1 MGP_NODShiLtJ_G0002324.1 mouse_genomes_project 9 119496215 119496754 - TEC TEC MGP_NODShiLtJ_T0094241.1 MGP_NODShiLtJ_G0035115.1 mouse_genomes_project 9 119458182 119459127 + MGP_NODShiLtJ_P0094241 Tmem89 protein_coding protein_coding MGP_NODShiLtJ_T0094242.1 MGP_NODShiLtJ_G0035115.1 mouse_genomes_project 9 119458182 119459127 + MGP_NODShiLtJ_P0094242 Tmem89 protein_coding protein_coding MGP_NODShiLtJ_T0018367.1 MGP_NODShiLtJ_G0015604.1 mouse_genomes_project 9 61301003 61317123 - Gm10658 processed_transcript processed_transcript MGP_NODShiLtJ_T0018368.1 MGP_NODShiLtJ_G0015604.1 mouse_genomes_project 9 61301576 61317282 - Gm10658 processed_transcript processed_transcript MGP_NODShiLtJ_T0090807.1 MGP_NODShiLtJ_G0034166.1 mouse_genomes_project 9 14289998 14295888 + MGP_NODShiLtJ_P0090807 Taf1d protein_coding protein_coding MGP_NODShiLtJ_T0090808.1 MGP_NODShiLtJ_G0034166.1 mouse_genomes_project 9 14289998 14295888 + MGP_NODShiLtJ_P0090808 Taf1d protein_coding protein_coding MGP_NODShiLtJ_T0091916.1 MGP_NODShiLtJ_G0034604.1 mouse_genomes_project 9 56532353 56538738 - MGP_NODShiLtJ_P0091916 AI593442 protein_coding protein_coding MGP_NODShiLtJ_T0094629.1 MGP_NODShiLtJ_G0035194.1 mouse_genomes_project 9 126316857 126353208 - MGP_NODShiLtJ_P0094629 Gpd1l protein_coding protein_coding MGP_NODShiLtJ_T0094630.1 MGP_NODShiLtJ_G0035194.1 mouse_genomes_project 9 126320860 126353096 - MGP_NODShiLtJ_P0094630 Gpd1l protein_coding protein_coding MGP_NODShiLtJ_T0094631.1 MGP_NODShiLtJ_G0035194.1 mouse_genomes_project 9 126328472 126336786 - Gpd1l protein_coding processed_transcript MGP_NODShiLtJ_T0005411.1 MGP_NODShiLtJ_G0004572.1 mouse_genomes_project 9 75492327 75493896 - Gm28731 antisense antisense MGP_NODShiLtJ_T0090908.1 MGP_NODShiLtJ_G0034220.1 mouse_genomes_project 9 20797751 20812683 + MGP_NODShiLtJ_P0090908 Zfp846 protein_coding protein_coding MGP_NODShiLtJ_T0090909.1 MGP_NODShiLtJ_G0034220.1 mouse_genomes_project 9 20797951 20812685 + MGP_NODShiLtJ_P0090909 Zfp846 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090910.1 MGP_NODShiLtJ_G0034220.1 mouse_genomes_project 9 20805381 20811962 + MGP_NODShiLtJ_P0090910 Zfp846 protein_coding protein_coding MGP_NODShiLtJ_T0002371.1 MGP_NODShiLtJ_G0002280.1 mouse_genomes_project 9 106856918 106858798 + TEC TEC MGP_NODShiLtJ_T0091451.1 MGP_NODShiLtJ_G0034449.1 mouse_genomes_project 9 42578279 42579203 + MGP_NODShiLtJ_P0091451 Olfr971 protein_coding protein_coding MGP_NODShiLtJ_T0091463.1 MGP_NODShiLtJ_G0034461.1 mouse_genomes_project 9 42987183 42989937 + MGP_NODShiLtJ_P0091463 Tmem225 protein_coding protein_coding MGP_NODShiLtJ_T0091804.1 MGP_NODShiLtJ_G0034573.1 mouse_genomes_project 9 53136175 53449444 - MGP_NODShiLtJ_P0091804 Ncam1 protein_coding protein_coding MGP_NODShiLtJ_T0091805.1 MGP_NODShiLtJ_G0034573.1 mouse_genomes_project 9 53136187 53205301 - MGP_NODShiLtJ_P0091805 Ncam1 protein_coding protein_coding MGP_NODShiLtJ_T0091806.1 MGP_NODShiLtJ_G0034573.1 mouse_genomes_project 9 53139675 53449391 - MGP_NODShiLtJ_P0091806 Ncam1 protein_coding protein_coding MGP_NODShiLtJ_T0091807.1 MGP_NODShiLtJ_G0034573.1 mouse_genomes_project 9 53151902 53449409 - MGP_NODShiLtJ_P0091807 Ncam1 protein_coding protein_coding MGP_NODShiLtJ_T0091809.1 MGP_NODShiLtJ_G0034573.1 mouse_genomes_project 9 53158247 53178403 - MGP_NODShiLtJ_P0091809 Ncam1 protein_coding protein_coding MGP_NODShiLtJ_T0091810.1 MGP_NODShiLtJ_G0034573.1 mouse_genomes_project 9 53165899 53449277 - MGP_NODShiLtJ_P0091810 Ncam1 protein_coding protein_coding MGP_NODShiLtJ_T0091667.1 MGP_NODShiLtJ_G0034525.1 mouse_genomes_project 9 48285271 48296145 - MGP_NODShiLtJ_P0091667 Cd3e protein_coding protein_coding MGP_NODShiLtJ_T0099612.1 MGP_NODShiLtJ_G0038006.1 mouse_genomes_project 9 71570285 71570387 - Gm23428 snRNA snRNA MGP_NODShiLtJ_T0092845.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 83922443 84047770 - MGP_NODShiLtJ_P0092845 Lrrc1 protein_coding protein_coding MGP_NODShiLtJ_T0092846.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 83922601 84046995 - MGP_NODShiLtJ_P0092846 Lrrc1 protein_coding protein_coding MGP_NODShiLtJ_T0092847.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 83922695 83940271 - Lrrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0092848.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 83922710 83933779 - MGP_NODShiLtJ_P0092848 Lrrc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092849.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 83926676 83934075 - Lrrc1 protein_coding retained_intron MGP_NODShiLtJ_T0092850.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 83940276 84047750 - MGP_NODShiLtJ_P0092850 Lrrc1 protein_coding protein_coding MGP_NODShiLtJ_T0092851.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 83950563 84001038 - Lrrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0092852.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 83964605 84047748 - Lrrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0092853.1 MGP_NODShiLtJ_G0034849.1 mouse_genomes_project 9 84043413 84047690 - Lrrc1 protein_coding retained_intron MGP_NODShiLtJ_T0094702.1 MGP_NODShiLtJ_G0035211.1 mouse_genomes_project 9 130913174 130915663 + MGP_NODShiLtJ_P0094702 protein_coding protein_coding MGP_NODShiLtJ_T0092628.1 MGP_NODShiLtJ_G0034806.1 mouse_genomes_project 9 77097486 77222653 - MGP_NODShiLtJ_P0092628 Gcom1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092629.1 MGP_NODShiLtJ_G0034806.1 mouse_genomes_project 9 77097486 77222653 - MGP_NODShiLtJ_P0092629 Gcom1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092630.1 MGP_NODShiLtJ_G0034806.1 mouse_genomes_project 9 77097486 77222653 - MGP_NODShiLtJ_P0092630 Gcom1 protein_coding protein_coding MGP_NODShiLtJ_T0092631.1 MGP_NODShiLtJ_G0034806.1 mouse_genomes_project 9 77097486 77222653 - MGP_NODShiLtJ_P0092631 Gcom1 protein_coding protein_coding MGP_NODShiLtJ_T0092310.1 MGP_NODShiLtJ_G0034720.1 mouse_genomes_project 9 67499447 67615098 + MGP_NODShiLtJ_P0092310 Itga11 protein_coding protein_coding MGP_NODShiLtJ_T0092311.1 MGP_NODShiLtJ_G0034720.1 mouse_genomes_project 9 67499481 67608273 + Itga11 protein_coding retained_intron MGP_NODShiLtJ_T0094821.1 MGP_NODShiLtJ_G0035249.1 mouse_genomes_project 9 133788512 133798430 - MGP_NODShiLtJ_P0094821 Hhatl protein_coding protein_coding MGP_NODShiLtJ_T0094822.1 MGP_NODShiLtJ_G0035249.1 mouse_genomes_project 9 133788518 133796959 - MGP_NODShiLtJ_P0094822 Hhatl protein_coding protein_coding MGP_NODShiLtJ_T0090890.1 MGP_NODShiLtJ_G0034217.1 mouse_genomes_project 9 20645034 20675423 - MGP_NODShiLtJ_P0090890 Zfp26 protein_coding protein_coding MGP_NODShiLtJ_T0090891.1 MGP_NODShiLtJ_G0034217.1 mouse_genomes_project 9 20647092 20675220 - Zfp26 protein_coding retained_intron MGP_NODShiLtJ_T0090892.1 MGP_NODShiLtJ_G0034217.1 mouse_genomes_project 9 20649124 20675252 - Zfp26 protein_coding retained_intron MGP_NODShiLtJ_T0090893.1 MGP_NODShiLtJ_G0034217.1 mouse_genomes_project 9 20650361 20653426 - Zfp26 protein_coding processed_transcript MGP_NODShiLtJ_T0090894.1 MGP_NODShiLtJ_G0034217.1 mouse_genomes_project 9 20654079 20675425 - Zfp26 protein_coding retained_intron MGP_NODShiLtJ_T0090895.1 MGP_NODShiLtJ_G0034217.1 mouse_genomes_project 9 20656368 20675090 - MGP_NODShiLtJ_P0090895 Zfp26 protein_coding protein_coding MGP_NODShiLtJ_T0092263.1 MGP_NODShiLtJ_G0034710.1 mouse_genomes_project 9 65491217 65582651 + MGP_NODShiLtJ_P0092263 Uaca protein_coding protein_coding MGP_NODShiLtJ_T0016001.1 MGP_NODShiLtJ_G0014109.1 mouse_genomes_project 9 101270932 101271460 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0018340.1 MGP_NODShiLtJ_G0015598.1 mouse_genomes_project 9 36749815 36765055 + 4930581F22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018341.1 MGP_NODShiLtJ_G0015598.1 mouse_genomes_project 9 36749854 36752403 + 4930581F22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018342.1 MGP_NODShiLtJ_G0015598.1 mouse_genomes_project 9 36751547 36757774 + 4930581F22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018343.1 MGP_NODShiLtJ_G0015598.1 mouse_genomes_project 9 36752114 36760524 + 4930581F22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018344.1 MGP_NODShiLtJ_G0015598.1 mouse_genomes_project 9 36752198 36758202 + 4930581F22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018345.1 MGP_NODShiLtJ_G0015598.1 mouse_genomes_project 9 36752328 36761031 + 4930581F22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0093696.1 MGP_NODShiLtJ_G0035033.1 mouse_genomes_project 9 116792190 116799775 - MGP_NODShiLtJ_P0093696 Parp3 protein_coding protein_coding MGP_NODShiLtJ_T0093697.1 MGP_NODShiLtJ_G0035033.1 mouse_genomes_project 9 116792497 116799202 - MGP_NODShiLtJ_P0093697 Parp3 protein_coding protein_coding MGP_NODShiLtJ_T0093698.1 MGP_NODShiLtJ_G0035033.1 mouse_genomes_project 9 116792859 116798995 - Parp3 protein_coding retained_intron MGP_NODShiLtJ_T0093699.1 MGP_NODShiLtJ_G0035033.1 mouse_genomes_project 9 116792859 116799495 - MGP_NODShiLtJ_P0093699 Parp3 protein_coding protein_coding MGP_NODShiLtJ_T0093700.1 MGP_NODShiLtJ_G0035033.1 mouse_genomes_project 9 116792865 116793892 - Parp3 protein_coding retained_intron MGP_NODShiLtJ_T0093701.1 MGP_NODShiLtJ_G0035033.1 mouse_genomes_project 9 116796291 116798930 - MGP_NODShiLtJ_P0093701 Parp3 protein_coding protein_coding MGP_NODShiLtJ_T0093702.1 MGP_NODShiLtJ_G0035033.1 mouse_genomes_project 9 116796498 116799422 - Parp3 protein_coding retained_intron MGP_NODShiLtJ_T0093703.1 MGP_NODShiLtJ_G0035033.1 mouse_genomes_project 9 116796528 116799221 - MGP_NODShiLtJ_P0093703 Parp3 protein_coding protein_coding MGP_NODShiLtJ_T0009232.1 MGP_NODShiLtJ_G0007410.1 mouse_genomes_project 9 107802135 107802762 - 2610303G11Rik lincRNA lincRNA MGP_NODShiLtJ_T0010940.1 MGP_NODShiLtJ_G0009073.1 mouse_genomes_project 9 22177690 22177750 - Mir7083 miRNA miRNA MGP_NODShiLtJ_T0092609.1 MGP_NODShiLtJ_G0034800.1 mouse_genomes_project 9 76228905 76230516 + MGP_NODShiLtJ_P0092609 Gm10642 protein_coding protein_coding MGP_NODShiLtJ_T0015911.1 MGP_NODShiLtJ_G0014019.1 mouse_genomes_project 9 25872472 25872550 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092511.1 MGP_NODShiLtJ_G0034776.1 mouse_genomes_project 9 72032994 72060562 - MGP_NODShiLtJ_P0092511 Aph1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010934.1 MGP_NODShiLtJ_G0009067.1 mouse_genomes_project 9 17464433 17464544 - Gm44498 miRNA miRNA MGP_NODShiLtJ_T0010929.1 MGP_NODShiLtJ_G0009062.1 mouse_genomes_project 9 7733309 7733410 - Gm26195 miRNA miRNA MGP_NODShiLtJ_T0005460.1 MGP_NODShiLtJ_G0004605.1 mouse_genomes_project 9 115714929 115724576 + Gm19667 antisense antisense MGP_NODShiLtJ_T0091380.1 MGP_NODShiLtJ_G0034390.1 mouse_genomes_project 9 40355548 40356490 + MGP_NODShiLtJ_P0091380 Olfr893 protein_coding protein_coding MGP_NODShiLtJ_T0002340.1 MGP_NODShiLtJ_G0002250.1 mouse_genomes_project 9 82239770 82244321 + TEC TEC MGP_NODShiLtJ_T0010979.1 MGP_NODShiLtJ_G0009112.1 mouse_genomes_project 9 112338485 112338537 - Mir7243 miRNA miRNA MGP_NODShiLtJ_T0093817.1 MGP_NODShiLtJ_G0035057.1 mouse_genomes_project 9 118016350 118019211 + MGP_NODShiLtJ_P0093817 Tusc2 protein_coding protein_coding MGP_NODShiLtJ_T0093818.1 MGP_NODShiLtJ_G0035057.1 mouse_genomes_project 9 118016449 118017047 + Tusc2 protein_coding processed_transcript MGP_NODShiLtJ_T0093819.1 MGP_NODShiLtJ_G0035057.1 mouse_genomes_project 9 118016468 118018094 + MGP_NODShiLtJ_P0093819 Tusc2 protein_coding protein_coding MGP_NODShiLtJ_T0010998.1 MGP_NODShiLtJ_G0009131.1 mouse_genomes_project 9 126872830 126872950 - Gm22243 miRNA miRNA MGP_NODShiLtJ_T0100895.1 MGP_NODShiLtJ_G0039289.1 mouse_genomes_project 9 69899213 69899355 - Gm24347 snoRNA snoRNA MGP_NODShiLtJ_T0010949.1 MGP_NODShiLtJ_G0009082.1 mouse_genomes_project 9 45508905 45508974 + Gm44311 miRNA miRNA MGP_NODShiLtJ_T0100896.1 MGP_NODShiLtJ_G0039290.1 mouse_genomes_project 9 71136768 71136900 - Gm22657 snoRNA snoRNA MGP_NODShiLtJ_T0093904.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118205522 118237431 - MGP_NODShiLtJ_P0093904 Rbm5 protein_coding protein_coding MGP_NODShiLtJ_T0093905.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118205647 118237416 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093906.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118205648 118225916 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093907.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118205652 118237415 - MGP_NODShiLtJ_P0093907 Rbm5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093908.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118205652 118237422 - MGP_NODShiLtJ_P0093908 Rbm5 protein_coding protein_coding MGP_NODShiLtJ_T0093909.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118207125 118209445 - MGP_NODShiLtJ_P0093909 Rbm5 protein_coding protein_coding MGP_NODShiLtJ_T0093910.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118208491 118209393 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093911.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118209427 118215192 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093912.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118210352 118215081 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093913.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118211201 118237386 - MGP_NODShiLtJ_P0093913 Rbm5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093914.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118211302 118217570 - MGP_NODShiLtJ_P0093914 Rbm5 protein_coding protein_coding MGP_NODShiLtJ_T0093915.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118215462 118217622 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093916.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118215669 118219502 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093917.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118217540 118220014 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093918.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118217569 118234032 - MGP_NODShiLtJ_P0093918 Rbm5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093919.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118219506 118237407 - MGP_NODShiLtJ_P0093919 Rbm5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093920.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118219510 118222583 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093921.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118219534 118236930 - MGP_NODShiLtJ_P0093921 Rbm5 protein_coding protein_coding MGP_NODShiLtJ_T0093922.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118223802 118237394 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093923.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118225671 118237394 - MGP_NODShiLtJ_P0093923 Rbm5 protein_coding protein_coding MGP_NODShiLtJ_T0093924.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118225736 118237380 - MGP_NODShiLtJ_P0093924 Rbm5 protein_coding protein_coding MGP_NODShiLtJ_T0093925.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118231528 118237424 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093926.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118233041 118237421 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0093927.1 MGP_NODShiLtJ_G0035068.1 mouse_genomes_project 9 118235619 118237394 - Rbm5 protein_coding retained_intron MGP_NODShiLtJ_T0090869.1 MGP_NODShiLtJ_G0034197.1 mouse_genomes_project 9 19206571 19207519 - MGP_NODShiLtJ_P0090869 Olfr850 protein_coding protein_coding MGP_NODShiLtJ_T0090651.1 MGP_NODShiLtJ_G0034113.1 mouse_genomes_project 9 2664577 2687859 + MGP_NODShiLtJ_P0090651 Casp1 protein_coding protein_coding MGP_NODShiLtJ_T0015999.1 MGP_NODShiLtJ_G0014107.1 mouse_genomes_project 9 99416348 99416640 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092766.1 MGP_NODShiLtJ_G0034829.1 mouse_genomes_project 9 80987541 81074901 + MGP_NODShiLtJ_P0092766 Fam214a protein_coding protein_coding MGP_NODShiLtJ_T0092767.1 MGP_NODShiLtJ_G0034829.1 mouse_genomes_project 9 81011094 81074901 + MGP_NODShiLtJ_P0092767 Fam214a protein_coding protein_coding MGP_NODShiLtJ_T0002383.1 MGP_NODShiLtJ_G0002292.1 mouse_genomes_project 9 111075728 111077767 + TEC TEC MGP_NODShiLtJ_T0090785.1 MGP_NODShiLtJ_G0034158.1 mouse_genomes_project 9 13733081 13784723 + MGP_NODShiLtJ_P0090785 Mre11a protein_coding protein_coding MGP_NODShiLtJ_T0090786.1 MGP_NODShiLtJ_G0034158.1 mouse_genomes_project 9 13733103 13787200 + MGP_NODShiLtJ_P0090786 Mre11a protein_coding protein_coding MGP_NODShiLtJ_T0090787.1 MGP_NODShiLtJ_G0034158.1 mouse_genomes_project 9 13733129 13748015 + MGP_NODShiLtJ_P0090787 Mre11a protein_coding protein_coding MGP_NODShiLtJ_T0090788.1 MGP_NODShiLtJ_G0034158.1 mouse_genomes_project 9 13745547 13760749 + MGP_NODShiLtJ_P0090788 Mre11a protein_coding protein_coding MGP_NODShiLtJ_T0090789.1 MGP_NODShiLtJ_G0034158.1 mouse_genomes_project 9 13745560 13752243 + MGP_NODShiLtJ_P0090789 Mre11a protein_coding protein_coding MGP_NODShiLtJ_T0091499.1 MGP_NODShiLtJ_G0034472.1 mouse_genomes_project 9 43954983 44029050 - MGP_NODShiLtJ_P0091499 Ubash3b protein_coding protein_coding MGP_NODShiLtJ_T0091500.1 MGP_NODShiLtJ_G0034472.1 mouse_genomes_project 9 43955167 44002291 - MGP_NODShiLtJ_P0091500 Ubash3b protein_coding protein_coding MGP_NODShiLtJ_T0009137.1 MGP_NODShiLtJ_G0007336.1 mouse_genomes_project 9 34337833 34362508 - Gm27162 lincRNA lincRNA MGP_NODShiLtJ_T0090983.1 MGP_NODShiLtJ_G0034248.1 mouse_genomes_project 9 21565435 21583730 - MGP_NODShiLtJ_P0090983 Ap1m2 protein_coding protein_coding MGP_NODShiLtJ_T0090984.1 MGP_NODShiLtJ_G0034248.1 mouse_genomes_project 9 21565435 21583730 - MGP_NODShiLtJ_P0090984 Ap1m2 protein_coding protein_coding MGP_NODShiLtJ_T0009237.1 MGP_NODShiLtJ_G0007415.1 mouse_genomes_project 9 110306740 110308319 + Gm28166 lincRNA lincRNA MGP_NODShiLtJ_T0093771.1 MGP_NODShiLtJ_G0035049.1 mouse_genomes_project 9 117748453 117761481 - MGP_NODShiLtJ_P0093771 Hemk1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093772.1 MGP_NODShiLtJ_G0035049.1 mouse_genomes_project 9 117748463 117759572 - MGP_NODShiLtJ_P0093772 Hemk1 protein_coding protein_coding MGP_NODShiLtJ_T0093773.1 MGP_NODShiLtJ_G0035049.1 mouse_genomes_project 9 117749071 117759540 - Hemk1 protein_coding retained_intron MGP_NODShiLtJ_T0093774.1 MGP_NODShiLtJ_G0035049.1 mouse_genomes_project 9 117749089 117757881 - Hemk1 protein_coding processed_transcript MGP_NODShiLtJ_T0093775.1 MGP_NODShiLtJ_G0035049.1 mouse_genomes_project 9 117749091 117750832 - Hemk1 protein_coding retained_intron MGP_NODShiLtJ_T0093776.1 MGP_NODShiLtJ_G0035049.1 mouse_genomes_project 9 117749370 117759555 - MGP_NODShiLtJ_P0093776 Hemk1 protein_coding protein_coding MGP_NODShiLtJ_T0093777.1 MGP_NODShiLtJ_G0035049.1 mouse_genomes_project 9 117750739 117752050 - Hemk1 protein_coding retained_intron MGP_NODShiLtJ_T0093778.1 MGP_NODShiLtJ_G0035049.1 mouse_genomes_project 9 117756363 117759524 - Hemk1 protein_coding retained_intron MGP_NODShiLtJ_T0090876.1 MGP_NODShiLtJ_G0034204.1 mouse_genomes_project 9 19981588 19986762 - MGP_NODShiLtJ_P0090876 Olfr860 protein_coding protein_coding MGP_NODShiLtJ_T0091961.1 MGP_NODShiLtJ_G0034622.1 mouse_genomes_project 9 58546908 58552944 + MGP_NODShiLtJ_P0091961 Sh2d7 protein_coding protein_coding MGP_NODShiLtJ_T0091962.1 MGP_NODShiLtJ_G0034622.1 mouse_genomes_project 9 58546912 58551578 + MGP_NODShiLtJ_P0091962 Sh2d7 protein_coding protein_coding MGP_NODShiLtJ_T0009268.1 MGP_NODShiLtJ_G0007437.1 mouse_genomes_project 9 129835573 129857550 + Gm17399 lincRNA lincRNA MGP_NODShiLtJ_T0092400.1 MGP_NODShiLtJ_G0034745.1 mouse_genomes_project 9 70067098 70124114 + MGP_NODShiLtJ_P0092400 Dpp8 protein_coding protein_coding MGP_NODShiLtJ_T0092401.1 MGP_NODShiLtJ_G0034745.1 mouse_genomes_project 9 70067362 70122454 + MGP_NODShiLtJ_P0092401 Dpp8 protein_coding protein_coding MGP_NODShiLtJ_T0002362.1 MGP_NODShiLtJ_G0002271.1 mouse_genomes_project 9 99961775 99964127 - TEC TEC MGP_NODShiLtJ_T0092582.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517017 75527333 + MGP_NODShiLtJ_P0092582 Gtf2a2 protein_coding protein_coding MGP_NODShiLtJ_T0092583.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517021 75527205 + Gtf2a2 protein_coding retained_intron MGP_NODShiLtJ_T0092584.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517032 75527204 + MGP_NODShiLtJ_P0092584 Gtf2a2 protein_coding protein_coding MGP_NODShiLtJ_T0092585.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517033 75527205 + MGP_NODShiLtJ_P0092585 Gtf2a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092586.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517035 75526982 + Gtf2a2 protein_coding processed_transcript MGP_NODShiLtJ_T0092587.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517038 75522689 + Gtf2a2 protein_coding retained_intron MGP_NODShiLtJ_T0092588.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517038 75527204 + MGP_NODShiLtJ_P0092588 Gtf2a2 protein_coding protein_coding MGP_NODShiLtJ_T0092589.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517041 75523941 + MGP_NODShiLtJ_P0092589 Gtf2a2 protein_coding protein_coding MGP_NODShiLtJ_T0092590.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517046 75523936 + Gtf2a2 protein_coding retained_intron MGP_NODShiLtJ_T0092591.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517051 75520106 + Gtf2a2 protein_coding retained_intron MGP_NODShiLtJ_T0092592.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517062 75523953 + MGP_NODShiLtJ_P0092592 Gtf2a2 protein_coding protein_coding MGP_NODShiLtJ_T0092593.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75517110 75527205 + MGP_NODShiLtJ_P0092593 Gtf2a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092594.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75520279 75527204 + Gtf2a2 protein_coding processed_transcript MGP_NODShiLtJ_T0092595.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75521286 75524377 + Gtf2a2 protein_coding retained_intron MGP_NODShiLtJ_T0092596.1 MGP_NODShiLtJ_G0034792.1 mouse_genomes_project 9 75523514 75527204 + Gtf2a2 protein_coding retained_intron MGP_NODShiLtJ_T0100901.1 MGP_NODShiLtJ_G0039295.1 mouse_genomes_project 9 79737220 79737350 - Gm25105 snoRNA snoRNA MGP_NODShiLtJ_T0002402.1 MGP_NODShiLtJ_G0002311.1 mouse_genomes_project 9 115282307 115285586 + TEC TEC MGP_NODShiLtJ_T0091340.1 MGP_NODShiLtJ_G0034365.1 mouse_genomes_project 9 39401650 39404834 - Robo3 protein_coding retained_intron MGP_NODShiLtJ_T0091341.1 MGP_NODShiLtJ_G0034365.1 mouse_genomes_project 9 39402026 39408572 - Robo3 protein_coding retained_intron MGP_NODShiLtJ_T0091342.1 MGP_NODShiLtJ_G0034365.1 mouse_genomes_project 9 39402026 39419117 - MGP_NODShiLtJ_P0091342 Robo3 protein_coding protein_coding MGP_NODShiLtJ_T0091343.1 MGP_NODShiLtJ_G0034365.1 mouse_genomes_project 9 39402026 39416106 - MGP_NODShiLtJ_P0091343 Robo3 protein_coding protein_coding MGP_NODShiLtJ_T0091344.1 MGP_NODShiLtJ_G0034365.1 mouse_genomes_project 9 39402143 39416106 - Robo3 protein_coding retained_intron MGP_NODShiLtJ_T0091345.1 MGP_NODShiLtJ_G0034365.1 mouse_genomes_project 9 39403385 39404761 - Robo3 protein_coding retained_intron MGP_NODShiLtJ_T0094736.1 MGP_NODShiLtJ_G0035225.1 mouse_genomes_project 9 131741292 131753174 - MGP_NODShiLtJ_P0094736 Gorasp1 protein_coding protein_coding MGP_NODShiLtJ_T0092127.1 MGP_NODShiLtJ_G0034680.1 mouse_genomes_project 9 62399125 62414311 + MGP_NODShiLtJ_P0092127 Cyp11a1 protein_coding protein_coding MGP_NODShiLtJ_T0092128.1 MGP_NODShiLtJ_G0034680.1 mouse_genomes_project 9 62407310 62420989 + MGP_NODShiLtJ_P0092128 Cyp11a1 protein_coding protein_coding MGP_NODShiLtJ_T0092129.1 MGP_NODShiLtJ_G0034680.1 mouse_genomes_project 9 62407636 62415955 + Cyp11a1 protein_coding retained_intron MGP_NODShiLtJ_T0092130.1 MGP_NODShiLtJ_G0034680.1 mouse_genomes_project 9 62410964 62419209 + MGP_NODShiLtJ_P0092130 Cyp11a1 protein_coding protein_coding MGP_NODShiLtJ_T0091051.1 MGP_NODShiLtJ_G0034273.1 mouse_genomes_project 9 22398704 22435663 - MGP_NODShiLtJ_P0091051 Elavl3 protein_coding protein_coding MGP_NODShiLtJ_T0091052.1 MGP_NODShiLtJ_G0034273.1 mouse_genomes_project 9 22407510 22420564 - MGP_NODShiLtJ_P0091052 Elavl3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094734.1 MGP_NODShiLtJ_G0035223.1 mouse_genomes_project 9 131709373 131742199 + MGP_NODShiLtJ_P0094734 Wdr48 protein_coding protein_coding MGP_NODShiLtJ_T0010988.1 MGP_NODShiLtJ_G0009121.1 mouse_genomes_project 9 119128668 119128742 + Mir191 miRNA miRNA MGP_NODShiLtJ_T0092001.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59277449 59347350 - Nrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0092002.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59277450 59347380 - MGP_NODShiLtJ_P0092002 Nrg4 protein_coding protein_coding MGP_NODShiLtJ_T0092003.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59278449 59302512 - Nrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0092004.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59278525 59347342 - MGP_NODShiLtJ_P0092004 Nrg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092005.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59278528 59394334 - MGP_NODShiLtJ_P0092005 Nrg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092006.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59278529 59347327 - MGP_NODShiLtJ_P0092006 Nrg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092007.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59278593 59347336 - Nrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0092008.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59281459 59347327 - MGP_NODShiLtJ_P0092008 Nrg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092009.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59300750 59347357 - MGP_NODShiLtJ_P0092009 Nrg4 protein_coding protein_coding MGP_NODShiLtJ_T0092010.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59302114 59394429 - Nrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0092011.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59310272 59347342 - Nrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0092012.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59319675 59347353 - Nrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0092013.1 MGP_NODShiLtJ_G0034638.1 mouse_genomes_project 9 59373789 59392774 - Nrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0099595.1 MGP_NODShiLtJ_G0037989.1 mouse_genomes_project 9 44328898 44329004 - Gm25401 snRNA snRNA MGP_NODShiLtJ_T0091006.1 MGP_NODShiLtJ_G0034253.1 mouse_genomes_project 9 21800893 21803698 - MGP_NODShiLtJ_P0091006 Tmed1 protein_coding protein_coding MGP_NODShiLtJ_T0093257.1 MGP_NODShiLtJ_G0034944.1 mouse_genomes_project 9 105791059 105827266 - MGP_NODShiLtJ_P0093257 Atp1b3 protein_coding protein_coding MGP_NODShiLtJ_T0093258.1 MGP_NODShiLtJ_G0034944.1 mouse_genomes_project 9 105799275 105804183 - Atp1b3 protein_coding retained_intron MGP_NODShiLtJ_T0093259.1 MGP_NODShiLtJ_G0034944.1 mouse_genomes_project 9 105807880 105811452 - Atp1b3 protein_coding processed_transcript MGP_NODShiLtJ_T0099635.1 MGP_NODShiLtJ_G0038029.1 mouse_genomes_project 9 105344926 105345104 + Gm24004 snRNA snRNA MGP_NODShiLtJ_T0092610.1 MGP_NODShiLtJ_G0034801.1 mouse_genomes_project 9 76253673 76361360 + MGP_NODShiLtJ_P0092610 Adam10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092611.1 MGP_NODShiLtJ_G0034801.1 mouse_genomes_project 9 76253673 76363207 + MGP_NODShiLtJ_P0092611 Adam10 protein_coding protein_coding MGP_NODShiLtJ_T0092612.1 MGP_NODShiLtJ_G0034801.1 mouse_genomes_project 9 76253692 76328750 + MGP_NODShiLtJ_P0092612 Adam10 protein_coding protein_coding MGP_NODShiLtJ_T0092613.1 MGP_NODShiLtJ_G0034801.1 mouse_genomes_project 9 76359031 76361356 + Adam10 protein_coding retained_intron MGP_NODShiLtJ_T0090969.1 MGP_NODShiLtJ_G0034243.1 mouse_genomes_project 9 21493258 21505016 - MGP_NODShiLtJ_P0090969 Keap1 protein_coding protein_coding MGP_NODShiLtJ_T0090970.1 MGP_NODShiLtJ_G0034243.1 mouse_genomes_project 9 21493259 21504755 - MGP_NODShiLtJ_P0090970 Keap1 protein_coding protein_coding MGP_NODShiLtJ_T0090971.1 MGP_NODShiLtJ_G0034243.1 mouse_genomes_project 9 21493595 21504497 - MGP_NODShiLtJ_P0090971 Keap1 protein_coding protein_coding MGP_NODShiLtJ_T0090972.1 MGP_NODShiLtJ_G0034243.1 mouse_genomes_project 9 21494161 21504763 - MGP_NODShiLtJ_P0090972 Keap1 protein_coding protein_coding MGP_NODShiLtJ_T0090973.1 MGP_NODShiLtJ_G0034243.1 mouse_genomes_project 9 21499669 21502877 - Keap1 protein_coding processed_transcript MGP_NODShiLtJ_T0090846.1 MGP_NODShiLtJ_G0034177.1 mouse_genomes_project 9 17864833 17866666 + MGP_NODShiLtJ_P0090846 Gm5612 protein_coding protein_coding MGP_NODShiLtJ_T0091368.1 MGP_NODShiLtJ_G0034379.1 mouse_genomes_project 9 39988837 39989888 + MGP_NODShiLtJ_P0091368 Olfr145 protein_coding protein_coding MGP_NODShiLtJ_T0100932.1 MGP_NODShiLtJ_G0039326.1 mouse_genomes_project 9 135235559 135235692 + Gm23323 snoRNA snoRNA MGP_NODShiLtJ_T0092328.1 MGP_NODShiLtJ_G0034728.1 mouse_genomes_project 9 68295891 68501382 - MGP_NODShiLtJ_P0092328 Iqch protein_coding protein_coding MGP_NODShiLtJ_T0092329.1 MGP_NODShiLtJ_G0034728.1 mouse_genomes_project 9 68296054 68501337 - MGP_NODShiLtJ_P0092329 Iqch protein_coding protein_coding MGP_NODShiLtJ_T0092330.1 MGP_NODShiLtJ_G0034728.1 mouse_genomes_project 9 68296054 68501337 - MGP_NODShiLtJ_P0092330 Iqch protein_coding protein_coding MGP_NODShiLtJ_T0092331.1 MGP_NODShiLtJ_G0034728.1 mouse_genomes_project 9 68296096 68501372 - MGP_NODShiLtJ_P0092331 Iqch protein_coding protein_coding MGP_NODShiLtJ_T0092332.1 MGP_NODShiLtJ_G0034728.1 mouse_genomes_project 9 68296269 68501306 - MGP_NODShiLtJ_P0092332 Iqch protein_coding protein_coding MGP_NODShiLtJ_T0092333.1 MGP_NODShiLtJ_G0034728.1 mouse_genomes_project 9 68478853 68501374 - Iqch protein_coding retained_intron MGP_NODShiLtJ_T0094880.1 MGP_NODShiLtJ_G0035271.1 mouse_genomes_project 9 135183104 135206107 + MGP_NODShiLtJ_P0094880 Exosc7 protein_coding protein_coding MGP_NODShiLtJ_T0094881.1 MGP_NODShiLtJ_G0035271.1 mouse_genomes_project 9 135183147 135189762 + Exosc7 protein_coding retained_intron MGP_NODShiLtJ_T0094882.1 MGP_NODShiLtJ_G0035271.1 mouse_genomes_project 9 135196362 135200906 + Exosc7 protein_coding processed_transcript MGP_NODShiLtJ_T0099596.1 MGP_NODShiLtJ_G0037990.1 mouse_genomes_project 9 47071029 47071134 - Gm23326 snRNA snRNA MGP_NODShiLtJ_T0091779.1 MGP_NODShiLtJ_G0034559.1 mouse_genomes_project 9 52021060 52034215 - MGP_NODShiLtJ_P0091779 Rexo2 protein_coding protein_coding MGP_NODShiLtJ_T0002355.1 MGP_NODShiLtJ_G0002264.1 mouse_genomes_project 9 95827096 95829901 + TEC TEC MGP_NODShiLtJ_T0002364.1 MGP_NODShiLtJ_G0002273.1 mouse_genomes_project 9 99995487 99996227 - TEC TEC MGP_NODShiLtJ_T0010953.1 MGP_NODShiLtJ_G0009086.1 mouse_genomes_project 9 48565569 48565634 - Mir7086 miRNA miRNA MGP_NODShiLtJ_T0099645.1 MGP_NODShiLtJ_G0038039.1 mouse_genomes_project 9 125977897 125978002 - Gm23232 snRNA snRNA MGP_NODShiLtJ_T0015930.1 MGP_NODShiLtJ_G0014038.1 mouse_genomes_project 9 59372873 59373966 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098117.1 MGP_NODShiLtJ_G0036529.1 mouse_genomes_project 9 122586056 122586174 - n-R5s90 rRNA rRNA MGP_NODShiLtJ_T0094536.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122168223 122213027 - MGP_NODShiLtJ_P0094536 Mlh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094537.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122168250 122213272 - MGP_NODShiLtJ_P0094537 Mlh1 protein_coding protein_coding MGP_NODShiLtJ_T0094538.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122168527 122170632 - Mlh1 protein_coding retained_intron MGP_NODShiLtJ_T0094539.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122169865 122170944 - Mlh1 protein_coding retained_intron MGP_NODShiLtJ_T0094540.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122169883 122213081 - Mlh1 protein_coding retained_intron MGP_NODShiLtJ_T0094541.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122181267 122187622 - Mlh1 protein_coding retained_intron MGP_NODShiLtJ_T0094542.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122181553 122196882 - MGP_NODShiLtJ_P0094542 Mlh1 protein_coding protein_coding MGP_NODShiLtJ_T0094543.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122189099 122200904 - MGP_NODShiLtJ_P0094543 Mlh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094544.1 MGP_NODShiLtJ_G0035168.1 mouse_genomes_project 9 122196578 122213015 - Mlh1 protein_coding processed_transcript MGP_NODShiLtJ_T0011621.1 MGP_NODShiLtJ_G0009754.1 mouse_genomes_project 9 70581 70665 - Gm27679 misc_RNA misc_RNA MGP_NODShiLtJ_T0093149.1 MGP_NODShiLtJ_G0034922.1 mouse_genomes_project 9 98512547 98550341 + MGP_NODShiLtJ_P0093149 Adamts7 protein_coding protein_coding MGP_NODShiLtJ_T0093150.1 MGP_NODShiLtJ_G0034922.1 mouse_genomes_project 9 98512556 98558312 + MGP_NODShiLtJ_P0093150 Adamts7 protein_coding protein_coding MGP_NODShiLtJ_T0093151.1 MGP_NODShiLtJ_G0034922.1 mouse_genomes_project 9 98512602 98550341 + MGP_NODShiLtJ_P0093151 Adamts7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093152.1 MGP_NODShiLtJ_G0034922.1 mouse_genomes_project 9 98512680 98550231 + MGP_NODShiLtJ_P0093152 Adamts7 protein_coding protein_coding MGP_NODShiLtJ_T0093153.1 MGP_NODShiLtJ_G0034922.1 mouse_genomes_project 9 98512704 98550343 + MGP_NODShiLtJ_P0093153 Adamts7 protein_coding protein_coding MGP_NODShiLtJ_T0093154.1 MGP_NODShiLtJ_G0034922.1 mouse_genomes_project 9 98538894 98541806 + Adamts7 protein_coding retained_intron MGP_NODShiLtJ_T0093155.1 MGP_NODShiLtJ_G0034922.1 mouse_genomes_project 9 98541224 98543728 + Adamts7 protein_coding processed_transcript MGP_NODShiLtJ_T0093156.1 MGP_NODShiLtJ_G0034922.1 mouse_genomes_project 9 98545368 98550338 + Adamts7 protein_coding retained_intron MGP_NODShiLtJ_T0091590.1 MGP_NODShiLtJ_G0034503.1 mouse_genomes_project 9 47559999 47575252 - MGP_NODShiLtJ_P0091590 Vps11 protein_coding protein_coding MGP_NODShiLtJ_T0091392.1 MGP_NODShiLtJ_G0034402.1 mouse_genomes_project 9 40741405 40742342 + MGP_NODShiLtJ_P0091392 Olfr905 protein_coding protein_coding MGP_NODShiLtJ_T0090958.1 MGP_NODShiLtJ_G0034238.1 mouse_genomes_project 9 21314051 21320032 - MGP_NODShiLtJ_P0090958 Fdx1l protein_coding protein_coding MGP_NODShiLtJ_T0093831.1 MGP_NODShiLtJ_G0035060.1 mouse_genomes_project 9 118032019 118037720 + MGP_NODShiLtJ_P0093831 Nat6 protein_coding protein_coding MGP_NODShiLtJ_T0093832.1 MGP_NODShiLtJ_G0035060.1 mouse_genomes_project 9 118032019 118037720 + MGP_NODShiLtJ_P0093832 Nat6 protein_coding protein_coding MGP_NODShiLtJ_T0093833.1 MGP_NODShiLtJ_G0035060.1 mouse_genomes_project 9 118032019 118037720 + MGP_NODShiLtJ_P0093833 Nat6 protein_coding protein_coding MGP_NODShiLtJ_T0093834.1 MGP_NODShiLtJ_G0035060.1 mouse_genomes_project 9 118032019 118037720 + MGP_NODShiLtJ_P0093834 Nat6 protein_coding protein_coding MGP_NODShiLtJ_T0093835.1 MGP_NODShiLtJ_G0035060.1 mouse_genomes_project 9 118032019 118037720 + MGP_NODShiLtJ_P0093835 Nat6 protein_coding protein_coding MGP_NODShiLtJ_T0093836.1 MGP_NODShiLtJ_G0035060.1 mouse_genomes_project 9 118032019 118037720 + MGP_NODShiLtJ_P0093836 Nat6 protein_coding protein_coding MGP_NODShiLtJ_T0093838.1 MGP_NODShiLtJ_G0035060.1 mouse_genomes_project 9 118033253 118038251 + MGP_NODShiLtJ_P0093838 Nat6 protein_coding protein_coding MGP_NODShiLtJ_T0010935.1 MGP_NODShiLtJ_G0009068.1 mouse_genomes_project 9 21145439 21145514 - Mir7081 miRNA miRNA MGP_NODShiLtJ_T0009254.1 MGP_NODShiLtJ_G0007429.1 mouse_genomes_project 9 119538587 119538944 - Gm38004 lincRNA lincRNA MGP_NODShiLtJ_T0018394.1 MGP_NODShiLtJ_G0015616.1 mouse_genomes_project 9 93719293 93743252 - 9330154J02Rik processed_transcript antisense MGP_NODShiLtJ_T0018395.1 MGP_NODShiLtJ_G0015616.1 mouse_genomes_project 9 93719293 93742406 - 9330154J02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018396.1 MGP_NODShiLtJ_G0015616.1 mouse_genomes_project 9 93719354 93743444 - 9330154J02Rik processed_transcript antisense MGP_NODShiLtJ_T0018397.1 MGP_NODShiLtJ_G0015616.1 mouse_genomes_project 9 93720579 93742405 - 9330154J02Rik processed_transcript retained_intron MGP_NODShiLtJ_T0092407.1 MGP_NODShiLtJ_G0034749.1 mouse_genomes_project 9 70326470 70341896 + MGP_NODShiLtJ_P0092407 protein_coding protein_coding MGP_NODShiLtJ_T0092408.1 MGP_NODShiLtJ_G0034749.1 mouse_genomes_project 9 70327114 70341826 + MGP_NODShiLtJ_P0092408 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091104.1 MGP_NODShiLtJ_G0034296.1 mouse_genomes_project 9 26016249 26098133 + MGP_NODShiLtJ_P0091104 Sept7 protein_coding protein_coding MGP_NODShiLtJ_T0092419.1 MGP_NODShiLtJ_G0034756.1 mouse_genomes_project 9 70508343 70530862 + MGP_NODShiLtJ_P0092419 Mtfmt protein_coding protein_coding MGP_NODShiLtJ_T0092420.1 MGP_NODShiLtJ_G0034756.1 mouse_genomes_project 9 70508349 70530221 + Mtfmt protein_coding retained_intron MGP_NODShiLtJ_T0092421.1 MGP_NODShiLtJ_G0034756.1 mouse_genomes_project 9 70509568 70521330 + Mtfmt protein_coding processed_transcript MGP_NODShiLtJ_T0092422.1 MGP_NODShiLtJ_G0034756.1 mouse_genomes_project 9 70517596 70529929 + Mtfmt protein_coding retained_intron MGP_NODShiLtJ_T0100865.1 MGP_NODShiLtJ_G0039259.1 mouse_genomes_project 9 14299965 14300098 + snoRNA snoRNA MGP_NODShiLtJ_T0002425.1 MGP_NODShiLtJ_G0002334.1 mouse_genomes_project 9 130098921 130099759 - TEC TEC MGP_NODShiLtJ_T0091273.1 MGP_NODShiLtJ_G0034346.1 mouse_genomes_project 9 37551445 37557873 - MGP_NODShiLtJ_P0091273 Gm5916 protein_coding protein_coding MGP_NODShiLtJ_T0093369.1 MGP_NODShiLtJ_G0034974.1 mouse_genomes_project 9 109372304 109380506 + MGP_NODShiLtJ_P0093369 Dzip1l protein_coding protein_coding MGP_NODShiLtJ_T0093370.1 MGP_NODShiLtJ_G0034974.1 mouse_genomes_project 9 109372350 109416912 + MGP_NODShiLtJ_P0093370 Dzip1l protein_coding protein_coding MGP_NODShiLtJ_T0093371.1 MGP_NODShiLtJ_G0034974.1 mouse_genomes_project 9 109372386 109416912 + MGP_NODShiLtJ_P0093371 Dzip1l protein_coding protein_coding MGP_NODShiLtJ_T0093372.1 MGP_NODShiLtJ_G0034974.1 mouse_genomes_project 9 109372653 109416912 + MGP_NODShiLtJ_P0093372 Dzip1l protein_coding protein_coding MGP_NODShiLtJ_T0093373.1 MGP_NODShiLtJ_G0034974.1 mouse_genomes_project 9 109377655 109416821 + MGP_NODShiLtJ_P0093373 Dzip1l protein_coding protein_coding MGP_NODShiLtJ_T0093374.1 MGP_NODShiLtJ_G0034974.1 mouse_genomes_project 9 109391711 109398559 + Dzip1l protein_coding processed_transcript MGP_NODShiLtJ_T0093375.1 MGP_NODShiLtJ_G0034974.1 mouse_genomes_project 9 109397838 109401304 + Dzip1l protein_coding retained_intron MGP_NODShiLtJ_T0091399.1 MGP_NODShiLtJ_G0034409.1 mouse_genomes_project 9 40967262 40968195 - MGP_NODShiLtJ_P0091399 Olfr916 protein_coding protein_coding MGP_NODShiLtJ_T0093839.1 MGP_NODShiLtJ_G0035061.1 mouse_genomes_project 9 118033954 118041011 + MGP_NODShiLtJ_P0093839 Hyal3 protein_coding protein_coding MGP_NODShiLtJ_T0093840.1 MGP_NODShiLtJ_G0035061.1 mouse_genomes_project 9 118034429 118041480 + MGP_NODShiLtJ_P0093840 Hyal3 protein_coding protein_coding MGP_NODShiLtJ_T0093841.1 MGP_NODShiLtJ_G0035061.1 mouse_genomes_project 9 118038952 118040840 + MGP_NODShiLtJ_P0093841 Hyal3 protein_coding protein_coding MGP_NODShiLtJ_T0100892.1 MGP_NODShiLtJ_G0039286.1 mouse_genomes_project 9 69117325 69117395 + Gm22571 snoRNA snoRNA MGP_NODShiLtJ_T0099585.1 MGP_NODShiLtJ_G0037979.1 mouse_genomes_project 9 14192127 14192282 - Gm22658 snRNA snRNA MGP_NODShiLtJ_T0100921.1 MGP_NODShiLtJ_G0039315.1 mouse_genomes_project 9 118466601 118466729 + Gm24944 snoRNA snoRNA MGP_NODShiLtJ_T0091395.1 MGP_NODShiLtJ_G0034405.1 mouse_genomes_project 9 40807206 40808328 + MGP_NODShiLtJ_P0091395 Olfr911-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0091782.1 MGP_NODShiLtJ_G0034562.1 mouse_genomes_project 9 52150581 52156090 - Nnmt protein_coding processed_transcript MGP_NODShiLtJ_T0091783.1 MGP_NODShiLtJ_G0034562.1 mouse_genomes_project 9 52150581 52165698 - MGP_NODShiLtJ_P0091783 Nnmt protein_coding protein_coding MGP_NODShiLtJ_T0091784.1 MGP_NODShiLtJ_G0034562.1 mouse_genomes_project 9 52150581 52165698 - MGP_NODShiLtJ_P0091784 Nnmt protein_coding protein_coding MGP_NODShiLtJ_T0091785.1 MGP_NODShiLtJ_G0034562.1 mouse_genomes_project 9 52150595 52156164 - Nnmt protein_coding processed_transcript MGP_NODShiLtJ_T0091786.1 MGP_NODShiLtJ_G0034562.1 mouse_genomes_project 9 52162844 52165622 - Nnmt protein_coding retained_intron MGP_NODShiLtJ_T0090855.1 MGP_NODShiLtJ_G0034183.1 mouse_genomes_project 9 18324491 18325430 - MGP_NODShiLtJ_P0090855 Olfr828 protein_coding protein_coding MGP_NODShiLtJ_T0093231.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105366399 105468518 + MGP_NODShiLtJ_P0093231 Xrn1 protein_coding protein_coding MGP_NODShiLtJ_T0093232.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105366406 105474229 + MGP_NODShiLtJ_P0093232 Xrn1 protein_coding protein_coding MGP_NODShiLtJ_T0093233.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105366432 105379463 + MGP_NODShiLtJ_P0093233 Xrn1 protein_coding protein_coding MGP_NODShiLtJ_T0093234.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105366471 105415158 + Xrn1 protein_coding retained_intron MGP_NODShiLtJ_T0093235.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105366498 105468518 + Xrn1 protein_coding retained_intron MGP_NODShiLtJ_T0093236.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105366501 105427505 + MGP_NODShiLtJ_P0093236 Xrn1 protein_coding protein_coding MGP_NODShiLtJ_T0093237.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105384145 105387760 + Xrn1 protein_coding retained_intron MGP_NODShiLtJ_T0093238.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105385917 105390718 + Xrn1 protein_coding retained_intron MGP_NODShiLtJ_T0093239.1 MGP_NODShiLtJ_G0034941.1 mouse_genomes_project 9 105433115 105436161 + Xrn1 protein_coding retained_intron MGP_NODShiLtJ_T0091599.1 MGP_NODShiLtJ_G0034505.1 mouse_genomes_project 9 47605653 47611507 + MGP_NODShiLtJ_P0091599 Slc37a4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100911.1 MGP_NODShiLtJ_G0039305.1 mouse_genomes_project 9 101501666 101501797 - Gm25417 snoRNA snoRNA MGP_NODShiLtJ_T0094832.1 MGP_NODShiLtJ_G0035254.1 mouse_genomes_project 9 133939526 133948391 + MGP_NODShiLtJ_P0094832 1700048O20Rik protein_coding protein_coding MGP_NODShiLtJ_T0098106.1 MGP_NODShiLtJ_G0036518.1 mouse_genomes_project 9 64683311 64683422 - Gm23668 rRNA rRNA MGP_NODShiLtJ_T0010974.1 MGP_NODShiLtJ_G0009107.1 mouse_genomes_project 9 78831344 78831466 + Gm27353 miRNA miRNA MGP_NODShiLtJ_T0094303.1 MGP_NODShiLtJ_G0035125.1 mouse_genomes_project 9 119645719 119655733 + MGP_NODShiLtJ_P0094303 Ccdc51 protein_coding protein_coding MGP_NODShiLtJ_T0094804.1 MGP_NODShiLtJ_G0035245.1 mouse_genomes_project 9 133703664 133706197 + MGP_NODShiLtJ_P0094804 Deb1 protein_coding protein_coding MGP_NODShiLtJ_T0091347.1 MGP_NODShiLtJ_G0034367.1 mouse_genomes_project 9 39521360 39533892 + MGP_NODShiLtJ_P0091347 Esam protein_coding protein_coding MGP_NODShiLtJ_T0091348.1 MGP_NODShiLtJ_G0034367.1 mouse_genomes_project 9 39522063 39532705 + MGP_NODShiLtJ_P0091348 Esam protein_coding protein_coding MGP_NODShiLtJ_T0091349.1 MGP_NODShiLtJ_G0034367.1 mouse_genomes_project 9 39523532 39524924 + MGP_NODShiLtJ_P0091349 Esam protein_coding protein_coding MGP_NODShiLtJ_T0091350.1 MGP_NODShiLtJ_G0034367.1 mouse_genomes_project 9 39524206 39529766 + MGP_NODShiLtJ_P0091350 Esam protein_coding protein_coding MGP_NODShiLtJ_T0091351.1 MGP_NODShiLtJ_G0034367.1 mouse_genomes_project 9 39531842 39533065 + Esam protein_coding retained_intron MGP_NODShiLtJ_T0092111.1 MGP_NODShiLtJ_G0034675.1 mouse_genomes_project 9 62060060 62104277 + MGP_NODShiLtJ_P0092111 Edc3 protein_coding protein_coding MGP_NODShiLtJ_T0092112.1 MGP_NODShiLtJ_G0034675.1 mouse_genomes_project 9 62060075 62103181 + MGP_NODShiLtJ_P0092112 Edc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092113.1 MGP_NODShiLtJ_G0034675.1 mouse_genomes_project 9 62060087 62067492 + MGP_NODShiLtJ_P0092113 Edc3 protein_coding protein_coding MGP_NODShiLtJ_T0091814.1 MGP_NODShiLtJ_G0034577.1 mouse_genomes_project 9 54213945 54237146 - MGP_NODShiLtJ_P0091814 Bco2 protein_coding protein_coding MGP_NODShiLtJ_T0091815.1 MGP_NODShiLtJ_G0034577.1 mouse_genomes_project 9 54223521 54235417 - MGP_NODShiLtJ_P0091815 Bco2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094162.1 MGP_NODShiLtJ_G0035103.1 mouse_genomes_project 9 119116571 119125934 + MGP_NODShiLtJ_P0094162 protein_coding protein_coding MGP_NODShiLtJ_T0094163.1 MGP_NODShiLtJ_G0035103.1 mouse_genomes_project 9 119116724 119122600 + MGP_NODShiLtJ_P0094163 protein_coding protein_coding MGP_NODShiLtJ_T0094164.1 MGP_NODShiLtJ_G0035103.1 mouse_genomes_project 9 119116755 119120487 + protein_coding retained_intron MGP_NODShiLtJ_T0094165.1 MGP_NODShiLtJ_G0035103.1 mouse_genomes_project 9 119116765 119122197 + protein_coding retained_intron MGP_NODShiLtJ_T0094166.1 MGP_NODShiLtJ_G0035103.1 mouse_genomes_project 9 119119939 119125744 + MGP_NODShiLtJ_P0094166 protein_coding protein_coding MGP_NODShiLtJ_T0094167.1 MGP_NODShiLtJ_G0035103.1 mouse_genomes_project 9 119122532 119123640 + protein_coding retained_intron MGP_NODShiLtJ_T0094168.1 MGP_NODShiLtJ_G0035103.1 mouse_genomes_project 9 119125549 119125919 + protein_coding retained_intron MGP_NODShiLtJ_T0094169.1 MGP_NODShiLtJ_G0035103.1 mouse_genomes_project 9 119125553 119125914 + protein_coding retained_intron MGP_NODShiLtJ_T0092892.1 MGP_NODShiLtJ_G0034863.1 mouse_genomes_project 9 85032394 85033119 - MGP_NODShiLtJ_P0092892 Dppa5a protein_coding protein_coding MGP_NODShiLtJ_T0098109.1 MGP_NODShiLtJ_G0036521.1 mouse_genomes_project 9 70997403 70997516 + n-R5s85 rRNA rRNA MGP_NODShiLtJ_T0091370.1 MGP_NODShiLtJ_G0034381.1 mouse_genomes_project 9 40092807 40093755 + MGP_NODShiLtJ_P0091370 Olfr881 protein_coding protein_coding MGP_NODShiLtJ_T0091740.1 MGP_NODShiLtJ_G0034547.1 mouse_genomes_project 9 49573346 49575245 + MGP_NODShiLtJ_P0091740 Apoa1 protein_coding protein_coding MGP_NODShiLtJ_T0091741.1 MGP_NODShiLtJ_G0034547.1 mouse_genomes_project 9 49573487 49574752 + Apoa1 protein_coding retained_intron MGP_NODShiLtJ_T0091897.1 MGP_NODShiLtJ_G0034594.1 mouse_genomes_project 9 54793844 54814148 - MGP_NODShiLtJ_P0091897 4833427G06Rik protein_coding protein_coding MGP_NODShiLtJ_T0091808.1 MGP_NODShiLtJ_G0034574.1 mouse_genomes_project 9 53152959 53199696 + MGP_NODShiLtJ_P0091808 Gm11149 protein_coding protein_coding MGP_NODShiLtJ_T0009124.1 MGP_NODShiLtJ_G0007323.1 mouse_genomes_project 9 12080982 12081385 - Gm29176 lincRNA lincRNA MGP_NODShiLtJ_T0101407.1 MGP_NODShiLtJ_G0039610.1 mouse_genomes_project 9 109188153 109203011 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101408.1 MGP_NODShiLtJ_G0039610.1 mouse_genomes_project 9 109202500 109207859 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0002357.1 MGP_NODShiLtJ_G0002266.1 mouse_genomes_project 9 97175246 97177161 - TEC TEC MGP_NODShiLtJ_T0100918.1 MGP_NODShiLtJ_G0039312.1 mouse_genomes_project 9 113092693 113092823 - Gm22595 snoRNA snoRNA MGP_NODShiLtJ_T0093730.1 MGP_NODShiLtJ_G0035042.1 mouse_genomes_project 9 117021710 117133240 - MGP_NODShiLtJ_P0093730 Rad54l2 protein_coding protein_coding MGP_NODShiLtJ_T0093731.1 MGP_NODShiLtJ_G0035042.1 mouse_genomes_project 9 117022417 117026911 - MGP_NODShiLtJ_P0093731 Rad54l2 protein_coding protein_coding MGP_NODShiLtJ_T0093732.1 MGP_NODShiLtJ_G0035042.1 mouse_genomes_project 9 117060813 117061751 - MGP_NODShiLtJ_P0093732 Rad54l2 protein_coding protein_coding MGP_NODShiLtJ_T0093733.1 MGP_NODShiLtJ_G0035042.1 mouse_genomes_project 9 117130809 117133222 - Rad54l2 protein_coding retained_intron MGP_NODShiLtJ_T0094617.1 MGP_NODShiLtJ_G0035184.1 mouse_genomes_project 9 125754486 125842079 + MGP_NODShiLtJ_P0094617 Glb1 protein_coding protein_coding MGP_NODShiLtJ_T0094619.1 MGP_NODShiLtJ_G0035184.1 mouse_genomes_project 9 125771614 125842088 + MGP_NODShiLtJ_P0094619 Glb1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093568.1 MGP_NODShiLtJ_G0035013.1 mouse_genomes_project 9 115397698 115634125 - MGP_NODShiLtJ_P0093568 Nek11 protein_coding protein_coding MGP_NODShiLtJ_T0093569.1 MGP_NODShiLtJ_G0035013.1 mouse_genomes_project 9 115398691 115631644 - MGP_NODShiLtJ_P0093569 Nek11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093570.1 MGP_NODShiLtJ_G0035013.1 mouse_genomes_project 9 115477639 115633888 - MGP_NODShiLtJ_P0093570 Nek11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093571.1 MGP_NODShiLtJ_G0035013.1 mouse_genomes_project 9 115529804 115633859 - MGP_NODShiLtJ_P0093571 Nek11 protein_coding protein_coding MGP_NODShiLtJ_T0094087.1 MGP_NODShiLtJ_G0035095.1 mouse_genomes_project 9 118934166 118959129 - MGP_NODShiLtJ_P0094087 Ccdc36 protein_coding protein_coding MGP_NODShiLtJ_T0092201.1 MGP_NODShiLtJ_G0034695.1 mouse_genomes_project 9 63797490 63825451 + MGP_NODShiLtJ_P0092201 Adpgk protein_coding protein_coding MGP_NODShiLtJ_T0005454.1 MGP_NODShiLtJ_G0004599.1 mouse_genomes_project 9 108222140 108223396 + Gm37637 antisense antisense MGP_NODShiLtJ_T0092095.1 MGP_NODShiLtJ_G0034664.1 mouse_genomes_project 9 61825435 61826783 + MGP_NODShiLtJ_P0092095 Rpp25 protein_coding protein_coding MGP_NODShiLtJ_T0016034.1 MGP_NODShiLtJ_G0014142.1 mouse_genomes_project 9 114003251 114003645 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005461.1 MGP_NODShiLtJ_G0004606.1 mouse_genomes_project 9 116444029 116455048 + D030055H07Rik antisense antisense MGP_NODShiLtJ_T0005462.1 MGP_NODShiLtJ_G0004606.1 mouse_genomes_project 9 116450289 116455094 + D030055H07Rik antisense antisense MGP_NODShiLtJ_T0005463.1 MGP_NODShiLtJ_G0004606.1 mouse_genomes_project 9 116451677 116455544 + D030055H07Rik antisense antisense MGP_NODShiLtJ_T0091238.1 MGP_NODShiLtJ_G0034332.1 mouse_genomes_project 9 36860190 36910181 - MGP_NODShiLtJ_P0091238 Fam118b protein_coding protein_coding MGP_NODShiLtJ_T0091239.1 MGP_NODShiLtJ_G0034332.1 mouse_genomes_project 9 36860256 36910206 - MGP_NODShiLtJ_P0091239 Fam118b protein_coding protein_coding MGP_NODShiLtJ_T0091240.1 MGP_NODShiLtJ_G0034332.1 mouse_genomes_project 9 36860256 36910178 - MGP_NODShiLtJ_P0091240 Fam118b protein_coding protein_coding MGP_NODShiLtJ_T0091241.1 MGP_NODShiLtJ_G0034332.1 mouse_genomes_project 9 36860471 36878681 - MGP_NODShiLtJ_P0091241 Fam118b protein_coding protein_coding MGP_NODShiLtJ_T0091242.1 MGP_NODShiLtJ_G0034332.1 mouse_genomes_project 9 36864802 36910168 - MGP_NODShiLtJ_P0091242 Fam118b protein_coding protein_coding MGP_NODShiLtJ_T0091243.1 MGP_NODShiLtJ_G0034332.1 mouse_genomes_project 9 36875303 36910181 - Fam118b protein_coding retained_intron MGP_NODShiLtJ_T0091244.1 MGP_NODShiLtJ_G0034332.1 mouse_genomes_project 9 36908721 36910181 - Fam118b protein_coding retained_intron MGP_NODShiLtJ_T0094623.1 MGP_NODShiLtJ_G0035189.1 mouse_genomes_project 9 125961664 126036901 - MGP_NODShiLtJ_P0094623 Cnot10 protein_coding protein_coding MGP_NODShiLtJ_T0005401.1 MGP_NODShiLtJ_G0004565.1 mouse_genomes_project 9 64579519 64588138 + Gm7616 antisense antisense MGP_NODShiLtJ_T0093380.1 MGP_NODShiLtJ_G0034976.1 mouse_genomes_project 9 109624463 109626542 - MGP_NODShiLtJ_P0093380 Sox14 protein_coding protein_coding MGP_NODShiLtJ_T0093381.1 MGP_NODShiLtJ_G0034976.1 mouse_genomes_project 9 109624577 109626028 - MGP_NODShiLtJ_P0093381 Sox14 protein_coding protein_coding MGP_NODShiLtJ_T0018348.1 MGP_NODShiLtJ_G0015600.1 mouse_genomes_project 9 43179631 43200916 + 1700110K17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018349.1 MGP_NODShiLtJ_G0015600.1 mouse_genomes_project 9 43190802 43200910 + 1700110K17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099601.1 MGP_NODShiLtJ_G0037995.1 mouse_genomes_project 9 50986176 50986283 - Gm22286 snRNA snRNA MGP_NODShiLtJ_T0090868.1 MGP_NODShiLtJ_G0034196.1 mouse_genomes_project 9 19164185 19165124 + MGP_NODShiLtJ_P0090868 Olfr849 protein_coding protein_coding MGP_NODShiLtJ_T0091029.1 MGP_NODShiLtJ_G0034261.1 mouse_genomes_project 9 22116980 22165105 - MGP_NODShiLtJ_P0091029 Kank2 protein_coding protein_coding MGP_NODShiLtJ_T0005468.1 MGP_NODShiLtJ_G0004611.1 mouse_genomes_project 9 117254386 117256681 + 4930524O07Rik antisense antisense MGP_NODShiLtJ_T0005469.1 MGP_NODShiLtJ_G0004611.1 mouse_genomes_project 9 117255010 117256679 + 4930524O07Rik antisense antisense MGP_NODShiLtJ_T0005470.1 MGP_NODShiLtJ_G0004611.1 mouse_genomes_project 9 117255453 117258028 + 4930524O07Rik antisense antisense MGP_NODShiLtJ_T0092878.1 MGP_NODShiLtJ_G0034859.1 mouse_genomes_project 9 84813825 84837355 + MGP_NODShiLtJ_P0092878 protein_coding protein_coding MGP_NODShiLtJ_T0092879.1 MGP_NODShiLtJ_G0034859.1 mouse_genomes_project 9 84821183 84837266 + protein_coding retained_intron MGP_NODShiLtJ_T0090729.1 MGP_NODShiLtJ_G0034141.1 mouse_genomes_project 9 7720555 9301314 - MGP_NODShiLtJ_P0090729 Cntn5 protein_coding protein_coding MGP_NODShiLtJ_T0090730.1 MGP_NODShiLtJ_G0034141.1 mouse_genomes_project 9 7720633 9301363 - MGP_NODShiLtJ_P0090730 Cntn5 protein_coding protein_coding MGP_NODShiLtJ_T0090731.1 MGP_NODShiLtJ_G0034141.1 mouse_genomes_project 9 7721027 8625535 - MGP_NODShiLtJ_P0090731 Cntn5 protein_coding protein_coding MGP_NODShiLtJ_T0090732.1 MGP_NODShiLtJ_G0034141.1 mouse_genomes_project 9 7721027 8625535 - MGP_NODShiLtJ_P0090732 Cntn5 protein_coding protein_coding MGP_NODShiLtJ_T0090733.1 MGP_NODShiLtJ_G0034141.1 mouse_genomes_project 9 8911576 9301037 - Cntn5 protein_coding retained_intron MGP_NODShiLtJ_T0100909.1 MGP_NODShiLtJ_G0039303.1 mouse_genomes_project 9 96003401 96003533 - Gm25528 snoRNA snoRNA MGP_NODShiLtJ_T0091419.1 MGP_NODShiLtJ_G0034423.1 mouse_genomes_project 9 41427182 41428243 - MGP_NODShiLtJ_P0091419 Olfr146 protein_coding protein_coding MGP_NODShiLtJ_T0099591.1 MGP_NODShiLtJ_G0037985.1 mouse_genomes_project 9 31529758 31529865 - Gm26435 snRNA snRNA MGP_NODShiLtJ_T0091852.1 MGP_NODShiLtJ_G0034586.1 mouse_genomes_project 9 54440493 54441775 - MGP_NODShiLtJ_P0091852 Hspb2 protein_coding protein_coding MGP_NODShiLtJ_T0005489.1 MGP_NODShiLtJ_G0004627.1 mouse_genomes_project 9 121896332 121900296 + antisense antisense MGP_NODShiLtJ_T0098498.1 MGP_NODShiLtJ_G0036892.1 mouse_genomes_project 9 135903851 135924876 - Gm17021 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0091853.1 MGP_NODShiLtJ_G0034587.1 mouse_genomes_project 9 54442177 54446067 + MGP_NODShiLtJ_P0091853 Cryab protein_coding protein_coding MGP_NODShiLtJ_T0094173.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119130235 119133124 + MGP_NODShiLtJ_P0094173 Dalrd3 protein_coding protein_coding MGP_NODShiLtJ_T0094174.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119130259 119131869 + MGP_NODShiLtJ_P0094174 Dalrd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094175.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119130263 119131036 + Dalrd3 protein_coding retained_intron MGP_NODShiLtJ_T0094176.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119131045 119132331 + Dalrd3 protein_coding retained_intron MGP_NODShiLtJ_T0094177.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119131356 119132190 + Dalrd3 protein_coding retained_intron MGP_NODShiLtJ_T0094178.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119131586 119133123 + Dalrd3 protein_coding retained_intron MGP_NODShiLtJ_T0094179.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119131867 119132881 + MGP_NODShiLtJ_P0094179 Dalrd3 protein_coding protein_coding MGP_NODShiLtJ_T0094180.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119132616 119133121 + Dalrd3 protein_coding retained_intron MGP_NODShiLtJ_T0094182.1 MGP_NODShiLtJ_G0035105.1 mouse_genomes_project 9 119132741 119133005 + MGP_NODShiLtJ_P0094182 Dalrd3 protein_coding protein_coding MGP_NODShiLtJ_T0091396.1 MGP_NODShiLtJ_G0034406.1 mouse_genomes_project 9 40822952 40823930 + MGP_NODShiLtJ_P0091396 Olfr910 protein_coding protein_coding MGP_NODShiLtJ_T0091802.1 MGP_NODShiLtJ_G0034572.1 mouse_genomes_project 9 53069260 53120463 - MGP_NODShiLtJ_P0091802 Ttc12 protein_coding protein_coding MGP_NODShiLtJ_T0091803.1 MGP_NODShiLtJ_G0034572.1 mouse_genomes_project 9 53089853 53120453 - Ttc12 protein_coding retained_intron MGP_NODShiLtJ_T0094396.1 MGP_NODShiLtJ_G0035140.1 mouse_genomes_project 9 121091243 121108264 + MGP_NODShiLtJ_P0094396 Cspg5 protein_coding protein_coding MGP_NODShiLtJ_T0094397.1 MGP_NODShiLtJ_G0035140.1 mouse_genomes_project 9 121091243 121108265 + MGP_NODShiLtJ_P0094397 Cspg5 protein_coding protein_coding MGP_NODShiLtJ_T0094398.1 MGP_NODShiLtJ_G0035140.1 mouse_genomes_project 9 121092943 121095066 + Cspg5 protein_coding retained_intron MGP_NODShiLtJ_T0094399.1 MGP_NODShiLtJ_G0035140.1 mouse_genomes_project 9 121092991 121108252 + MGP_NODShiLtJ_P0094399 Cspg5 protein_coding protein_coding MGP_NODShiLtJ_T0094400.1 MGP_NODShiLtJ_G0035140.1 mouse_genomes_project 9 121093525 121108264 + MGP_NODShiLtJ_P0094400 Cspg5 protein_coding protein_coding MGP_NODShiLtJ_T0093416.1 MGP_NODShiLtJ_G0034982.1 mouse_genomes_project 9 111039572 111063287 + MGP_NODShiLtJ_P0093416 Msl2 protein_coding protein_coding MGP_NODShiLtJ_T0093417.1 MGP_NODShiLtJ_G0034982.1 mouse_genomes_project 9 111040228 111066310 + MGP_NODShiLtJ_P0093417 Msl2 protein_coding protein_coding MGP_NODShiLtJ_T0091540.1 MGP_NODShiLtJ_G0034488.1 mouse_genomes_project 9 47284138 47301679 - MGP_NODShiLtJ_P0091540 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091541.1 MGP_NODShiLtJ_G0034488.1 mouse_genomes_project 9 47284150 47291376 - protein_coding processed_transcript MGP_NODShiLtJ_T0091557.1 MGP_NODShiLtJ_G0034488.1 mouse_genomes_project 9 47300591 47303646 - MGP_NODShiLtJ_P0091557 protein_coding protein_coding MGP_NODShiLtJ_T0090804.1 MGP_NODShiLtJ_G0034165.1 mouse_genomes_project 9 14267093 14285305 - MGP_NODShiLtJ_P0090804 4931406C07Rik protein_coding protein_coding MGP_NODShiLtJ_T0090805.1 MGP_NODShiLtJ_G0034165.1 mouse_genomes_project 9 14267093 14290233 - MGP_NODShiLtJ_P0090805 4931406C07Rik protein_coding protein_coding MGP_NODShiLtJ_T0090806.1 MGP_NODShiLtJ_G0034165.1 mouse_genomes_project 9 14267093 14289952 - MGP_NODShiLtJ_P0090806 4931406C07Rik protein_coding protein_coding MGP_NODShiLtJ_T0094556.1 MGP_NODShiLtJ_G0035171.1 mouse_genomes_project 9 122402380 122457791 + MGP_NODShiLtJ_P0094556 Dclk3 protein_coding protein_coding MGP_NODShiLtJ_T0099588.1 MGP_NODShiLtJ_G0037982.1 mouse_genomes_project 9 20378974 20379119 - Gm26290 snRNA snRNA MGP_NODShiLtJ_T0091131.1 MGP_NODShiLtJ_G0034305.1 mouse_genomes_project 9 28001566 28069038 + MGP_NODShiLtJ_P0091131 Ncapd3 protein_coding protein_coding MGP_NODShiLtJ_T0093347.1 MGP_NODShiLtJ_G0034969.1 mouse_genomes_project 9 109024491 109071268 - MGP_NODShiLtJ_P0093347 Esyt3 protein_coding protein_coding MGP_NODShiLtJ_T0093348.1 MGP_NODShiLtJ_G0034969.1 mouse_genomes_project 9 109032062 109035494 - Esyt3 protein_coding retained_intron MGP_NODShiLtJ_T0093349.1 MGP_NODShiLtJ_G0034969.1 mouse_genomes_project 9 109032106 109037800 - MGP_NODShiLtJ_P0093349 Esyt3 protein_coding protein_coding MGP_NODShiLtJ_T0093350.1 MGP_NODShiLtJ_G0034969.1 mouse_genomes_project 9 109045600 109051675 - Esyt3 protein_coding retained_intron MGP_NODShiLtJ_T0093351.1 MGP_NODShiLtJ_G0034969.1 mouse_genomes_project 9 109068348 109071307 - Esyt3 protein_coding retained_intron MGP_NODShiLtJ_T0099607.1 MGP_NODShiLtJ_G0038001.1 mouse_genomes_project 9 67999139 67999246 + Gm25064 snRNA snRNA MGP_NODShiLtJ_T0092494.1 MGP_NODShiLtJ_G0034773.1 mouse_genomes_project 9 71755931 71762067 - MGP_NODShiLtJ_P0092494 Fbxl22 protein_coding protein_coding MGP_NODShiLtJ_T0094668.1 MGP_NODShiLtJ_G0035203.1 mouse_genomes_project 9 130189836 130196993 + MGP_NODShiLtJ_P0094668 Eomes protein_coding protein_coding MGP_NODShiLtJ_T0094669.1 MGP_NODShiLtJ_G0035203.1 mouse_genomes_project 9 130189968 130197760 + MGP_NODShiLtJ_P0094669 Eomes protein_coding protein_coding MGP_NODShiLtJ_T0094670.1 MGP_NODShiLtJ_G0035203.1 mouse_genomes_project 9 130190477 130194385 + MGP_NODShiLtJ_P0094670 Eomes protein_coding protein_coding MGP_NODShiLtJ_T0098108.1 MGP_NODShiLtJ_G0036520.1 mouse_genomes_project 9 68974122 68974217 + Gm25606 rRNA rRNA MGP_NODShiLtJ_T0093301.1 MGP_NODShiLtJ_G0034951.1 mouse_genomes_project 9 106915336 106938110 - MGP_NODShiLtJ_P0093301 Trim42 protein_coding protein_coding MGP_NODShiLtJ_T0010947.1 MGP_NODShiLtJ_G0009080.1 mouse_genomes_project 9 44550872 44550968 + Mirlet7a-2 miRNA miRNA MGP_NODShiLtJ_T0005451.1 MGP_NODShiLtJ_G0004597.1 mouse_genomes_project 9 106915390 106938097 + Gm15891 antisense antisense MGP_NODShiLtJ_T0099643.1 MGP_NODShiLtJ_G0038037.1 mouse_genomes_project 9 119319833 119319940 - Gm24259 snRNA snRNA MGP_NODShiLtJ_T0010931.1 MGP_NODShiLtJ_G0009064.1 mouse_genomes_project 9 12477241 12477339 + Gm22643 miRNA miRNA MGP_NODShiLtJ_T0010925.1 MGP_NODShiLtJ_G0009058.1 mouse_genomes_project 9 1518507 1518574 - Gm23992 miRNA miRNA MGP_NODShiLtJ_T0010926.1 MGP_NODShiLtJ_G0009059.1 mouse_genomes_project 9 1616694 1616778 - Gm23811 miRNA miRNA MGP_NODShiLtJ_T0094467.1 MGP_NODShiLtJ_G0035151.1 mouse_genomes_project 9 121609512 121635778 - MGP_NODShiLtJ_P0094467 Pth1r protein_coding protein_coding MGP_NODShiLtJ_T0094468.1 MGP_NODShiLtJ_G0035151.1 mouse_genomes_project 9 121609515 121631252 - MGP_NODShiLtJ_P0094468 Pth1r protein_coding protein_coding MGP_NODShiLtJ_T0094469.1 MGP_NODShiLtJ_G0035151.1 mouse_genomes_project 9 121609566 121631468 - MGP_NODShiLtJ_P0094469 Pth1r protein_coding protein_coding MGP_NODShiLtJ_T0094470.1 MGP_NODShiLtJ_G0035151.1 mouse_genomes_project 9 121615365 121635712 - MGP_NODShiLtJ_P0094470 Pth1r protein_coding protein_coding MGP_NODShiLtJ_T0094471.1 MGP_NODShiLtJ_G0035151.1 mouse_genomes_project 9 121620684 121635801 - MGP_NODShiLtJ_P0094471 Pth1r protein_coding protein_coding MGP_NODShiLtJ_T0091524.1 MGP_NODShiLtJ_G0034481.1 mouse_genomes_project 9 46331042 46350847 - MGP_NODShiLtJ_P0091524 Oaf protein_coding protein_coding MGP_NODShiLtJ_T0010944.1 MGP_NODShiLtJ_G0009077.1 mouse_genomes_project 9 41477926 41478010 - miRNA miRNA MGP_NODShiLtJ_T0092319.1 MGP_NODShiLtJ_G0034724.1 mouse_genomes_project 9 67721915 67831636 - MGP_NODShiLtJ_P0092319 Pias1 protein_coding protein_coding MGP_NODShiLtJ_T0092598.1 MGP_NODShiLtJ_G0034794.1 mouse_genomes_project 9 75600398 75668045 - MGP_NODShiLtJ_P0092598 Fam81a protein_coding protein_coding MGP_NODShiLtJ_T0092599.1 MGP_NODShiLtJ_G0034794.1 mouse_genomes_project 9 75613236 75613763 - Fam81a protein_coding retained_intron MGP_NODShiLtJ_T0092600.1 MGP_NODShiLtJ_G0034794.1 mouse_genomes_project 9 75651381 75668270 - MGP_NODShiLtJ_P0092600 Fam81a protein_coding protein_coding MGP_NODShiLtJ_T0092601.1 MGP_NODShiLtJ_G0034794.1 mouse_genomes_project 9 75651412 75668971 - MGP_NODShiLtJ_P0092601 Fam81a protein_coding protein_coding MGP_NODShiLtJ_T0092748.1 MGP_NODShiLtJ_G0034823.1 mouse_genomes_project 9 78941036 78942088 + MGP_NODShiLtJ_P0092748 Khdc3 protein_coding protein_coding MGP_NODShiLtJ_T0092749.1 MGP_NODShiLtJ_G0034823.1 mouse_genomes_project 9 78941598 78943639 + MGP_NODShiLtJ_P0092749 Khdc3 protein_coding protein_coding MGP_NODShiLtJ_T0092750.1 MGP_NODShiLtJ_G0034823.1 mouse_genomes_project 9 78941598 78943639 + MGP_NODShiLtJ_P0092750 Khdc3 protein_coding protein_coding MGP_NODShiLtJ_T0092752.1 MGP_NODShiLtJ_G0034823.1 mouse_genomes_project 9 78941710 78943393 + MGP_NODShiLtJ_P0092752 Khdc3 protein_coding protein_coding MGP_NODShiLtJ_T0010961.1 MGP_NODShiLtJ_G0009094.1 mouse_genomes_project 9 58726462 58726531 + Mir5710 miRNA miRNA MGP_NODShiLtJ_T0094148.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065001 119086230 + MGP_NODShiLtJ_P0094148 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094149.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065282 119081209 + MGP_NODShiLtJ_P0094149 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094150.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065298 119066903 + Qrich1 protein_coding processed_transcript MGP_NODShiLtJ_T0094151.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065298 119098641 + MGP_NODShiLtJ_P0094151 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094152.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065305 119116278 + MGP_NODShiLtJ_P0094152 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094153.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065309 119116449 + MGP_NODShiLtJ_P0094153 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094154.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065347 119081195 + MGP_NODShiLtJ_P0094154 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094155.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065350 119081235 + MGP_NODShiLtJ_P0094155 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094156.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065351 119098410 + MGP_NODShiLtJ_P0094156 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094157.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065711 119082963 + Qrich1 protein_coding retained_intron MGP_NODShiLtJ_T0094158.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119065735 119081231 + MGP_NODShiLtJ_P0094158 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094159.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119080747 119085980 + MGP_NODShiLtJ_P0094159 Qrich1 protein_coding protein_coding MGP_NODShiLtJ_T0094160.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119111472 119115854 + Qrich1 protein_coding retained_intron MGP_NODShiLtJ_T0094161.1 MGP_NODShiLtJ_G0035102.1 mouse_genomes_project 9 119111810 119115685 + Qrich1 protein_coding retained_intron MGP_NODShiLtJ_T0091529.1 MGP_NODShiLtJ_G0034485.1 mouse_genomes_project 9 46987792 46990348 + MGP_NODShiLtJ_P0091529 Gm3898 protein_coding protein_coding MGP_NODShiLtJ_T0002330.1 MGP_NODShiLtJ_G0002240.1 mouse_genomes_project 9 78514578 78514788 + TEC TEC MGP_NODShiLtJ_T0018337.1 MGP_NODShiLtJ_G0015597.1 mouse_genomes_project 9 21486104 21487142 + Gm16754 processed_transcript retained_intron MGP_NODShiLtJ_T0018338.1 MGP_NODShiLtJ_G0015597.1 mouse_genomes_project 9 21486104 21496168 + Gm16754 processed_transcript antisense MGP_NODShiLtJ_T0018339.1 MGP_NODShiLtJ_G0015597.1 mouse_genomes_project 9 21486136 21496577 + Gm16754 processed_transcript antisense MGP_NODShiLtJ_T0094406.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121190772 121230944 + MGP_NODShiLtJ_P0094406 Scap protein_coding protein_coding MGP_NODShiLtJ_T0094407.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121190780 121210796 + Scap protein_coding retained_intron MGP_NODShiLtJ_T0094408.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121190840 121244391 + MGP_NODShiLtJ_P0094408 Scap protein_coding protein_coding MGP_NODShiLtJ_T0094409.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121191034 121210644 + MGP_NODShiLtJ_P0094409 Scap protein_coding protein_coding MGP_NODShiLtJ_T0094410.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121191120 121230176 + MGP_NODShiLtJ_P0094410 Scap protein_coding protein_coding MGP_NODShiLtJ_T0094411.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121201682 121210644 + MGP_NODShiLtJ_P0094411 Scap protein_coding protein_coding MGP_NODShiLtJ_T0094412.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121218502 121221003 + Scap protein_coding retained_intron MGP_NODShiLtJ_T0094413.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121218935 121230145 + Scap protein_coding processed_transcript MGP_NODShiLtJ_T0094414.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121232172 121234552 + Scap protein_coding retained_intron MGP_NODShiLtJ_T0094415.1 MGP_NODShiLtJ_G0035142.1 mouse_genomes_project 9 121236145 121236629 + Scap protein_coding retained_intron MGP_NODShiLtJ_T0009163.1 MGP_NODShiLtJ_G0007356.1 mouse_genomes_project 9 57158872 57176031 + 4930510E17Rik lincRNA lincRNA MGP_NODShiLtJ_T0090833.1 MGP_NODShiLtJ_G0034173.1 mouse_genomes_project 9 16166068 16192773 + MGP_NODShiLtJ_P0090833 Gm5611 protein_coding protein_coding MGP_NODShiLtJ_T0002346.1 MGP_NODShiLtJ_G0002256.1 mouse_genomes_project 9 90910949 90913570 + TEC TEC MGP_NODShiLtJ_T0098472.1 MGP_NODShiLtJ_G0036871.1 mouse_genomes_project 9 126640903 126644348 + Gm27002 sense_intronic sense_intronic MGP_NODShiLtJ_T0091259.1 MGP_NODShiLtJ_G0034337.1 mouse_genomes_project 9 37210658 37221164 - MGP_NODShiLtJ_P0091259 Hyls1 protein_coding protein_coding MGP_NODShiLtJ_T0091260.1 MGP_NODShiLtJ_G0034337.1 mouse_genomes_project 9 37215222 37220863 - Hyls1 protein_coding retained_intron MGP_NODShiLtJ_T0093315.1 MGP_NODShiLtJ_G0034957.1 mouse_genomes_project 9 108195312 108198908 + Copb2 protein_coding retained_intron MGP_NODShiLtJ_T0093316.1 MGP_NODShiLtJ_G0034957.1 mouse_genomes_project 9 108195322 108220044 + MGP_NODShiLtJ_P0093316 Copb2 protein_coding protein_coding MGP_NODShiLtJ_T0093317.1 MGP_NODShiLtJ_G0034957.1 mouse_genomes_project 9 108211566 108212884 + Copb2 protein_coding retained_intron MGP_NODShiLtJ_T0093318.1 MGP_NODShiLtJ_G0034957.1 mouse_genomes_project 9 108218506 108219491 + Copb2 protein_coding retained_intron MGP_NODShiLtJ_T0093319.1 MGP_NODShiLtJ_G0034957.1 mouse_genomes_project 9 108219007 108219693 + Copb2 protein_coding retained_intron MGP_NODShiLtJ_T0093320.1 MGP_NODShiLtJ_G0034957.1 mouse_genomes_project 9 108219208 108219923 + Copb2 protein_coding retained_intron MGP_NODShiLtJ_T0093025.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94423459 94518678 + MGP_NODShiLtJ_P0093025 Dopey1 protein_coding protein_coding MGP_NODShiLtJ_T0093026.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94423475 94468575 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093027.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94423480 94509774 + MGP_NODShiLtJ_P0093027 Dopey1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093028.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94423484 94463723 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093029.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94423516 94464847 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093030.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94423516 94473248 + MGP_NODShiLtJ_P0093030 Dopey1 protein_coding protein_coding MGP_NODShiLtJ_T0093031.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94423519 94518559 + MGP_NODShiLtJ_P0093031 Dopey1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093032.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94444127 94518561 + MGP_NODShiLtJ_P0093032 Dopey1 protein_coding protein_coding MGP_NODShiLtJ_T0093033.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94446703 94450543 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093034.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94450071 94452973 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093035.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94457579 94461550 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093036.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94464193 94468099 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093037.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94464485 94476607 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093038.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94481366 94485311 + MGP_NODShiLtJ_P0093038 Dopey1 protein_coding protein_coding MGP_NODShiLtJ_T0093039.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94483717 94509239 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093040.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94493258 94517380 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093041.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94494684 94517385 + MGP_NODShiLtJ_P0093041 Dopey1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093042.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94505557 94511868 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0093043.1 MGP_NODShiLtJ_G0034892.1 mouse_genomes_project 9 94512367 94517385 + Dopey1 protein_coding retained_intron MGP_NODShiLtJ_T0094483.1 MGP_NODShiLtJ_G0035157.1 mouse_genomes_project 9 121746004 121759758 + MGP_NODShiLtJ_P0094483 Prss46 protein_coding protein_coding MGP_NODShiLtJ_T0094484.1 MGP_NODShiLtJ_G0035157.1 mouse_genomes_project 9 121750876 121759752 + MGP_NODShiLtJ_P0094484 Prss46 protein_coding protein_coding MGP_NODShiLtJ_T0093200.1 MGP_NODShiLtJ_G0034935.1 mouse_genomes_project 9 104789000 104858996 - MGP_NODShiLtJ_P0093200 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093201.1 MGP_NODShiLtJ_G0034935.1 mouse_genomes_project 9 104789006 104859029 - MGP_NODShiLtJ_P0093201 protein_coding protein_coding MGP_NODShiLtJ_T0093202.1 MGP_NODShiLtJ_G0034935.1 mouse_genomes_project 9 104793112 104859131 - MGP_NODShiLtJ_P0093202 protein_coding protein_coding MGP_NODShiLtJ_T0093203.1 MGP_NODShiLtJ_G0034935.1 mouse_genomes_project 9 104793488 104859130 - MGP_NODShiLtJ_P0093203 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093204.1 MGP_NODShiLtJ_G0034935.1 mouse_genomes_project 9 104812113 104816330 - protein_coding retained_intron MGP_NODShiLtJ_T0093205.1 MGP_NODShiLtJ_G0034935.1 mouse_genomes_project 9 104840925 104858991 - MGP_NODShiLtJ_P0093205 protein_coding protein_coding MGP_NODShiLtJ_T0093206.1 MGP_NODShiLtJ_G0034935.1 mouse_genomes_project 9 104849100 104859020 - protein_coding retained_intron MGP_NODShiLtJ_T0093207.1 MGP_NODShiLtJ_G0034935.1 mouse_genomes_project 9 104856168 104859014 - protein_coding retained_intron MGP_NODShiLtJ_T0093950.1 MGP_NODShiLtJ_G0035072.1 mouse_genomes_project 9 118406922 118410915 + MGP_NODShiLtJ_P0093950 Actl11 protein_coding protein_coding MGP_NODShiLtJ_T0090848.1 MGP_NODShiLtJ_G0034179.1 mouse_genomes_project 9 17894282 17918708 - MGP_NODShiLtJ_P0090848 Zfp558 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090849.1 MGP_NODShiLtJ_G0034179.1 mouse_genomes_project 9 17894899 17913987 - MGP_NODShiLtJ_P0090849 Zfp558 protein_coding protein_coding MGP_NODShiLtJ_T0090850.1 MGP_NODShiLtJ_G0034179.1 mouse_genomes_project 9 17898364 17918713 - Zfp558 protein_coding processed_transcript MGP_NODShiLtJ_T0090851.1 MGP_NODShiLtJ_G0034179.1 mouse_genomes_project 9 17913317 17913850 - Zfp558 protein_coding processed_transcript MGP_NODShiLtJ_T0090768.1 MGP_NODShiLtJ_G0034151.1 mouse_genomes_project 9 13382926 13430410 - MGP_NODShiLtJ_P0090768 Kdm4d protein_coding protein_coding MGP_NODShiLtJ_T0091691.1 MGP_NODShiLtJ_G0034535.1 mouse_genomes_project 9 48619267 48651824 + MGP_NODShiLtJ_P0091691 Tmprss13 protein_coding protein_coding MGP_NODShiLtJ_T0097853.1 MGP_NODShiLtJ_G0036265.1 mouse_genomes_project 9 120860415 120863594 + pseudogene pseudogene MGP_NODShiLtJ_T0090950.1 MGP_NODShiLtJ_G0034230.1 mouse_genomes_project 9 21124881 21129202 - MGP_NODShiLtJ_P0090950 Eif3g protein_coding protein_coding MGP_NODShiLtJ_T0011728.1 MGP_NODShiLtJ_G0009836.1 mouse_genomes_project 9 130985618 130999727 - MGP_NODShiLtJ_P0011728 Slc22a13b-ps polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011003.1 MGP_NODShiLtJ_G0009136.1 mouse_genomes_project 9 134726898 134726997 + Mir138-1 miRNA miRNA MGP_NODShiLtJ_T0009243.1 MGP_NODShiLtJ_G0007421.1 mouse_genomes_project 9 114036695 114080365 - Gm29154 lincRNA lincRNA MGP_NODShiLtJ_T0009244.1 MGP_NODShiLtJ_G0007421.1 mouse_genomes_project 9 114036798 114079645 - Gm29154 lincRNA lincRNA MGP_NODShiLtJ_T0009134.1 MGP_NODShiLtJ_G0007333.1 mouse_genomes_project 9 28172322 28172736 - Gm29172 lincRNA lincRNA MGP_NODShiLtJ_T0005486.1 MGP_NODShiLtJ_G0004624.1 mouse_genomes_project 9 120131093 120143452 + antisense antisense MGP_NODShiLtJ_T0099605.1 MGP_NODShiLtJ_G0037999.1 mouse_genomes_project 9 59636328 59636419 - Gm23407 snRNA snRNA MGP_NODShiLtJ_T0093946.1 MGP_NODShiLtJ_G0035071.1 mouse_genomes_project 9 118384115 118397631 + MGP_NODShiLtJ_P0093946 Mst1r protein_coding protein_coding MGP_NODShiLtJ_T0093947.1 MGP_NODShiLtJ_G0035071.1 mouse_genomes_project 9 118384149 118397629 + MGP_NODShiLtJ_P0093947 Mst1r protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093948.1 MGP_NODShiLtJ_G0035071.1 mouse_genomes_project 9 118392251 118392977 + Mst1r protein_coding retained_intron MGP_NODShiLtJ_T0093949.1 MGP_NODShiLtJ_G0035071.1 mouse_genomes_project 9 118393472 118394153 + Mst1r protein_coding retained_intron MGP_NODShiLtJ_T0018428.1 MGP_NODShiLtJ_G0015628.1 mouse_genomes_project 9 121901916 121920558 + Gm10030 processed_transcript antisense MGP_NODShiLtJ_T0018429.1 MGP_NODShiLtJ_G0015628.1 mouse_genomes_project 9 121912903 121919054 + Gm10030 processed_transcript retained_intron MGP_NODShiLtJ_T0018430.1 MGP_NODShiLtJ_G0015628.1 mouse_genomes_project 9 121917339 121919359 + Gm10030 processed_transcript processed_transcript MGP_NODShiLtJ_T0005353.1 MGP_NODShiLtJ_G0004533.1 mouse_genomes_project 9 5570404 5596603 - AV064505 antisense antisense MGP_NODShiLtJ_T0092916.1 MGP_NODShiLtJ_G0034872.1 mouse_genomes_project 9 86654084 86661477 - MGP_NODShiLtJ_P0092916 Cox7a2 protein_coding protein_coding MGP_NODShiLtJ_T0091103.1 MGP_NODShiLtJ_G0034295.1 mouse_genomes_project 9 25871362 25872553 - MGP_NODShiLtJ_P0091103 Gm10076 protein_coding protein_coding MGP_NODShiLtJ_T0092482.1 MGP_NODShiLtJ_G0034771.1 mouse_genomes_project 9 71350808 71475351 + MGP_NODShiLtJ_P0092482 Dapk2 protein_coding protein_coding MGP_NODShiLtJ_T0092483.1 MGP_NODShiLtJ_G0034771.1 mouse_genomes_project 9 71350820 71419983 + Dapk2 protein_coding retained_intron MGP_NODShiLtJ_T0092484.1 MGP_NODShiLtJ_G0034771.1 mouse_genomes_project 9 71418649 71472067 + MGP_NODShiLtJ_P0092484 Dapk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092485.1 MGP_NODShiLtJ_G0034771.1 mouse_genomes_project 9 71471501 71474824 + Dapk2 protein_coding retained_intron MGP_NODShiLtJ_T0002352.1 MGP_NODShiLtJ_G0002261.1 mouse_genomes_project 9 94698627 94701149 + TEC TEC MGP_NODShiLtJ_T0002405.1 MGP_NODShiLtJ_G0002314.1 mouse_genomes_project 9 116388811 116391777 + TEC TEC MGP_NODShiLtJ_T0093194.1 MGP_NODShiLtJ_G0034932.1 mouse_genomes_project 9 103795339 103817425 - MGP_NODShiLtJ_P0093194 1190002N15Rik protein_coding protein_coding MGP_NODShiLtJ_T0015974.1 MGP_NODShiLtJ_G0014082.1 mouse_genomes_project 9 89487786 89488538 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010978.1 MGP_NODShiLtJ_G0009111.1 mouse_genomes_project 9 104049640 104049702 + Mir7656 miRNA miRNA MGP_NODShiLtJ_T0002375.1 MGP_NODShiLtJ_G0002284.1 mouse_genomes_project 9 108960710 108962463 - TEC TEC MGP_NODShiLtJ_T0009209.1 MGP_NODShiLtJ_G0007394.1 mouse_genomes_project 9 97304013 97306777 + 9430037G07Rik lincRNA lincRNA MGP_NODShiLtJ_T0092733.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78833558 78868482 - MGP_NODShiLtJ_P0092733 Pigb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092734.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78834620 78841797 - MGP_NODShiLtJ_P0092734 Pigb protein_coding protein_coding MGP_NODShiLtJ_T0092736.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78839850 78867803 - MGP_NODShiLtJ_P0092736 Pigb protein_coding protein_coding MGP_NODShiLtJ_T0092737.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78840803 78867755 - MGP_NODShiLtJ_P0092737 Pigb protein_coding protein_coding MGP_NODShiLtJ_T0092739.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78841835 78867803 - MGP_NODShiLtJ_P0092739 Pigb protein_coding protein_coding MGP_NODShiLtJ_T0092740.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78843750 78845344 - Pigb protein_coding retained_intron MGP_NODShiLtJ_T0092741.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78848484 78863782 - MGP_NODShiLtJ_P0092741 Pigb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092742.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78855176 78858221 - Pigb protein_coding retained_intron MGP_NODShiLtJ_T0092743.1 MGP_NODShiLtJ_G0034821.1 mouse_genomes_project 9 78859973 78861761 - Pigb protein_coding retained_intron MGP_NODShiLtJ_T0093176.1 MGP_NODShiLtJ_G0034926.1 mouse_genomes_project 9 101101043 101119847 + MGP_NODShiLtJ_P0093176 Plscr5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092608.1 MGP_NODShiLtJ_G0034799.1 mouse_genomes_project 9 76164127 76229829 - MGP_NODShiLtJ_P0092608 Fam63b protein_coding protein_coding MGP_NODShiLtJ_T0015924.1 MGP_NODShiLtJ_G0014032.1 mouse_genomes_project 9 40324018 40325040 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092109.1 MGP_NODShiLtJ_G0034673.1 mouse_genomes_project 9 62026727 62033438 - MGP_NODShiLtJ_P0092109 Cyp1a2 protein_coding protein_coding MGP_NODShiLtJ_T0094015.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536078 118577299 - MGP_NODShiLtJ_P0094015 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0094016.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536209 118571735 - MGP_NODShiLtJ_P0094016 Rnf123 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094017.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536209 118571735 - MGP_NODShiLtJ_P0094017 Rnf123 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094018.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536216 118573254 - MGP_NODShiLtJ_P0094018 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0094019.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536221 118573693 - Rnf123 protein_coding retained_intron MGP_NODShiLtJ_T0094020.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536221 118573254 - MGP_NODShiLtJ_P0094020 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0094021.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536221 118573328 - MGP_NODShiLtJ_P0094021 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0094022.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536237 118536775 - Rnf123 protein_coding retained_intron MGP_NODShiLtJ_T0094023.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536769 118544287 - MGP_NODShiLtJ_P0094023 Rnf123 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094024.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536778 118573328 - MGP_NODShiLtJ_P0094024 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0094025.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118536786 118537244 - Rnf123 protein_coding retained_intron MGP_NODShiLtJ_T0094027.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118540443 118573681 - Rnf123 protein_coding retained_intron MGP_NODShiLtJ_T0094028.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118540610 118541584 - Rnf123 protein_coding retained_intron MGP_NODShiLtJ_T0094029.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118541104 118544322 - MGP_NODShiLtJ_P0094029 Rnf123 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094030.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118542712 118546546 - Rnf123 protein_coding retained_intron MGP_NODShiLtJ_T0094031.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118555716 118572222 - MGP_NODShiLtJ_P0094031 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0094032.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118556682 118573258 - MGP_NODShiLtJ_P0094032 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0094033.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118556909 118573219 - MGP_NODShiLtJ_P0094033 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0094034.1 MGP_NODShiLtJ_G0035082.1 mouse_genomes_project 9 118571674 118577297 - MGP_NODShiLtJ_P0094034 Rnf123 protein_coding protein_coding MGP_NODShiLtJ_T0002324.1 MGP_NODShiLtJ_G0002234.1 mouse_genomes_project 9 78084064 78085050 + TEC TEC MGP_NODShiLtJ_T0092867.1 MGP_NODShiLtJ_G0034855.1 mouse_genomes_project 9 84693676 84752233 + MGP_NODShiLtJ_P0092867 Ick protein_coding protein_coding MGP_NODShiLtJ_T0092868.1 MGP_NODShiLtJ_G0034855.1 mouse_genomes_project 9 84693719 84697912 + MGP_NODShiLtJ_P0092868 Ick protein_coding protein_coding MGP_NODShiLtJ_T0092869.1 MGP_NODShiLtJ_G0034855.1 mouse_genomes_project 9 84697325 84702952 + Ick protein_coding processed_transcript MGP_NODShiLtJ_T0092870.1 MGP_NODShiLtJ_G0034855.1 mouse_genomes_project 9 84697723 84718610 + Ick protein_coding retained_intron MGP_NODShiLtJ_T0092871.1 MGP_NODShiLtJ_G0034855.1 mouse_genomes_project 9 84697766 84710139 + MGP_NODShiLtJ_P0092871 Ick protein_coding protein_coding MGP_NODShiLtJ_T0092872.1 MGP_NODShiLtJ_G0034855.1 mouse_genomes_project 9 84697782 84749707 + MGP_NODShiLtJ_P0092872 Ick protein_coding protein_coding MGP_NODShiLtJ_T0092873.1 MGP_NODShiLtJ_G0034855.1 mouse_genomes_project 9 84697797 84756412 + MGP_NODShiLtJ_P0092873 Ick protein_coding protein_coding MGP_NODShiLtJ_T0092874.1 MGP_NODShiLtJ_G0034855.1 mouse_genomes_project 9 84739784 84754758 + Ick protein_coding retained_intron MGP_NODShiLtJ_T0015908.1 MGP_NODShiLtJ_G0014016.1 mouse_genomes_project 9 23154655 23156974 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092050.1 MGP_NODShiLtJ_G0034651.1 mouse_genomes_project 9 61082072 61118115 + MGP_NODShiLtJ_P0092050 Cspg4 protein_coding protein_coding MGP_NODShiLtJ_T0092423.1 MGP_NODShiLtJ_G0034757.1 mouse_genomes_project 9 70538726 70567736 + MGP_NODShiLtJ_P0092423 Spg21 protein_coding protein_coding MGP_NODShiLtJ_T0094606.1 MGP_NODShiLtJ_G0035179.1 mouse_genomes_project 9 125160869 125222926 - MGP_NODShiLtJ_P0094606 Fbxl2 protein_coding protein_coding MGP_NODShiLtJ_T0094607.1 MGP_NODShiLtJ_G0035179.1 mouse_genomes_project 9 125175116 125222958 - MGP_NODShiLtJ_P0094607 Fbxl2 protein_coding protein_coding MGP_NODShiLtJ_T0094608.1 MGP_NODShiLtJ_G0035179.1 mouse_genomes_project 9 125176549 125222923 - MGP_NODShiLtJ_P0094608 Fbxl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094609.1 MGP_NODShiLtJ_G0035179.1 mouse_genomes_project 9 125181851 125190004 - Fbxl2 protein_coding retained_intron MGP_NODShiLtJ_T0094610.1 MGP_NODShiLtJ_G0035179.1 mouse_genomes_project 9 125187894 125222971 - Fbxl2 protein_coding retained_intron MGP_NODShiLtJ_T0094611.1 MGP_NODShiLtJ_G0035179.1 mouse_genomes_project 9 125201201 125242209 - Fbxl2 protein_coding processed_transcript MGP_NODShiLtJ_T0094000.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118482725 118531887 + MGP_NODShiLtJ_P0094000 Ip6k1 protein_coding protein_coding MGP_NODShiLtJ_T0094001.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118482853 118527956 + MGP_NODShiLtJ_P0094001 Ip6k1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094002.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118482858 118528816 + Ip6k1 protein_coding processed_transcript MGP_NODShiLtJ_T0094003.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118482867 118529214 + Ip6k1 protein_coding retained_intron MGP_NODShiLtJ_T0094004.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118482870 118515914 + MGP_NODShiLtJ_P0094004 Ip6k1 protein_coding protein_coding MGP_NODShiLtJ_T0094005.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118482895 118523089 + MGP_NODShiLtJ_P0094005 Ip6k1 protein_coding protein_coding MGP_NODShiLtJ_T0094006.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118504508 118528712 + MGP_NODShiLtJ_P0094006 Ip6k1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094007.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118504540 118514267 + Ip6k1 protein_coding processed_transcript MGP_NODShiLtJ_T0094008.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118514235 118529248 + MGP_NODShiLtJ_P0094008 Ip6k1 protein_coding protein_coding MGP_NODShiLtJ_T0094009.1 MGP_NODShiLtJ_G0035080.1 mouse_genomes_project 9 118527971 118528644 + MGP_NODShiLtJ_P0094009 Ip6k1 protein_coding protein_coding MGP_NODShiLtJ_T0093020.1 MGP_NODShiLtJ_G0034890.1 mouse_genomes_project 9 93741666 93746148 + MGP_NODShiLtJ_P0093020 Tpbg protein_coding protein_coding MGP_NODShiLtJ_T0093021.1 MGP_NODShiLtJ_G0034890.1 mouse_genomes_project 9 93742151 93746148 + MGP_NODShiLtJ_P0093021 Tpbg protein_coding protein_coding MGP_NODShiLtJ_T0093022.1 MGP_NODShiLtJ_G0034890.1 mouse_genomes_project 9 93742481 93743046 + Tpbg protein_coding processed_transcript MGP_NODShiLtJ_T0099597.1 MGP_NODShiLtJ_G0037991.1 mouse_genomes_project 9 47690584 47690701 - Gm22540 snRNA snRNA MGP_NODShiLtJ_T0018398.1 MGP_NODShiLtJ_G0015617.1 mouse_genomes_project 9 96674725 96676862 - Snhg5 processed_transcript lincRNA MGP_NODShiLtJ_T0018399.1 MGP_NODShiLtJ_G0015617.1 mouse_genomes_project 9 96674727 96676823 - Snhg5 processed_transcript lincRNA MGP_NODShiLtJ_T0018400.1 MGP_NODShiLtJ_G0015617.1 mouse_genomes_project 9 96674732 96675898 - Snhg5 processed_transcript lincRNA MGP_NODShiLtJ_T0015969.1 MGP_NODShiLtJ_G0014077.1 mouse_genomes_project 9 85056698 85057265 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091791.1 MGP_NODShiLtJ_G0034566.1 mouse_genomes_project 9 52580044 52645607 + MGP_NODShiLtJ_P0091791 Usp28 protein_coding protein_coding MGP_NODShiLtJ_T0091792.1 MGP_NODShiLtJ_G0034566.1 mouse_genomes_project 9 52580140 52644639 + MGP_NODShiLtJ_P0091792 Usp28 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100905.1 MGP_NODShiLtJ_G0039299.1 mouse_genomes_project 9 89539254 89539385 + Gm23748 snoRNA snoRNA MGP_NODShiLtJ_T0090737.1 MGP_NODShiLtJ_G0034144.1 mouse_genomes_project 9 12231459 12563501 + MGP_NODShiLtJ_P0090737 protein_coding protein_coding MGP_NODShiLtJ_T0090739.1 MGP_NODShiLtJ_G0034144.1 mouse_genomes_project 9 12476005 12567439 + MGP_NODShiLtJ_P0090739 protein_coding protein_coding MGP_NODShiLtJ_T0090740.1 MGP_NODShiLtJ_G0034144.1 mouse_genomes_project 9 12477652 12565408 + MGP_NODShiLtJ_P0090740 protein_coding protein_coding MGP_NODShiLtJ_T0090741.1 MGP_NODShiLtJ_G0034144.1 mouse_genomes_project 9 12518461 12565410 + protein_coding processed_transcript MGP_NODShiLtJ_T0092804.1 MGP_NODShiLtJ_G0034837.1 mouse_genomes_project 9 81512041 81537777 + MGP_NODShiLtJ_P0092804 Leo1 protein_coding protein_coding MGP_NODShiLtJ_T0015971.1 MGP_NODShiLtJ_G0014079.1 mouse_genomes_project 9 86995594 86995922 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015950.1 MGP_NODShiLtJ_G0014058.1 mouse_genomes_project 9 78640898 78641205 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091800.1 MGP_NODShiLtJ_G0034570.1 mouse_genomes_project 9 52960277 53033574 + MGP_NODShiLtJ_P0091800 Drd2 protein_coding protein_coding MGP_NODShiLtJ_T0009171.1 MGP_NODShiLtJ_G0007364.1 mouse_genomes_project 9 65382699 65385379 + B930082K07Rik lincRNA lincRNA MGP_NODShiLtJ_T0015941.1 MGP_NODShiLtJ_G0014049.1 mouse_genomes_project 9 77565436 77566145 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090887.1 MGP_NODShiLtJ_G0034215.1 mouse_genomes_project 9 20514462 20529172 - MGP_NODShiLtJ_P0090887 Olfr18 protein_coding protein_coding MGP_NODShiLtJ_T0093458.1 MGP_NODShiLtJ_G0034990.1 mouse_genomes_project 9 112790559 112808321 + MGP_NODShiLtJ_P0093458 Gm5627 protein_coding protein_coding MGP_NODShiLtJ_T0090854.1 MGP_NODShiLtJ_G0034182.1 mouse_genomes_project 9 18241307 18242361 - MGP_NODShiLtJ_P0090854 Olfr24 protein_coding protein_coding MGP_NODShiLtJ_T0090803.1 MGP_NODShiLtJ_G0034164.1 mouse_genomes_project 9 14244070 14263624 - MGP_NODShiLtJ_P0090803 Med17 protein_coding protein_coding MGP_NODShiLtJ_T0092950.1 MGP_NODShiLtJ_G0034877.1 mouse_genomes_project 9 87265923 87403872 - MGP_NODShiLtJ_P0092950 Impg1 protein_coding protein_coding MGP_NODShiLtJ_T0092951.1 MGP_NODShiLtJ_G0034877.1 mouse_genomes_project 9 87266559 87403915 - MGP_NODShiLtJ_P0092951 Impg1 protein_coding protein_coding MGP_NODShiLtJ_T0092952.1 MGP_NODShiLtJ_G0034877.1 mouse_genomes_project 9 87341905 87403872 - MGP_NODShiLtJ_P0092952 Impg1 protein_coding protein_coding MGP_NODShiLtJ_T0016039.1 MGP_NODShiLtJ_G0014147.1 mouse_genomes_project 9 117421310 117422513 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002381.1 MGP_NODShiLtJ_G0002290.1 mouse_genomes_project 9 110817868 110820896 + TEC TEC MGP_NODShiLtJ_T0093049.1 MGP_NODShiLtJ_G0034894.1 mouse_genomes_project 9 94537253 94539996 + MGP_NODShiLtJ_P0093049 Rwdd2a protein_coding protein_coding MGP_NODShiLtJ_T0093050.1 MGP_NODShiLtJ_G0034894.1 mouse_genomes_project 9 94537278 94540162 + MGP_NODShiLtJ_P0093050 Rwdd2a protein_coding protein_coding MGP_NODShiLtJ_T0093051.1 MGP_NODShiLtJ_G0034894.1 mouse_genomes_project 9 94537315 94540103 + MGP_NODShiLtJ_P0093051 Rwdd2a protein_coding protein_coding MGP_NODShiLtJ_T0099646.1 MGP_NODShiLtJ_G0038040.1 mouse_genomes_project 9 126248625 126248729 + Gm23889 snRNA snRNA MGP_NODShiLtJ_T0092474.1 MGP_NODShiLtJ_G0034769.1 mouse_genomes_project 9 71277070 71315186 - MGP_NODShiLtJ_P0092474 Snx1 protein_coding protein_coding MGP_NODShiLtJ_T0092475.1 MGP_NODShiLtJ_G0034769.1 mouse_genomes_project 9 71278061 71280286 - Snx1 protein_coding retained_intron MGP_NODShiLtJ_T0092476.1 MGP_NODShiLtJ_G0034769.1 mouse_genomes_project 9 71283125 71285514 - Snx1 protein_coding retained_intron MGP_NODShiLtJ_T0092477.1 MGP_NODShiLtJ_G0034769.1 mouse_genomes_project 9 71285481 71290762 - Snx1 protein_coding retained_intron MGP_NODShiLtJ_T0092478.1 MGP_NODShiLtJ_G0034769.1 mouse_genomes_project 9 71286328 71316891 - MGP_NODShiLtJ_P0092478 Snx1 protein_coding protein_coding MGP_NODShiLtJ_T0092479.1 MGP_NODShiLtJ_G0034769.1 mouse_genomes_project 9 71293537 71294791 - Snx1 protein_coding retained_intron MGP_NODShiLtJ_T0092480.1 MGP_NODShiLtJ_G0034769.1 mouse_genomes_project 9 71298209 71315097 - Snx1 protein_coding retained_intron MGP_NODShiLtJ_T0005419.1 MGP_NODShiLtJ_G0004578.1 mouse_genomes_project 9 82544084 82545354 + Gm27234 antisense antisense MGP_NODShiLtJ_T0016020.1 MGP_NODShiLtJ_G0014128.1 mouse_genomes_project 9 107925030 107927151 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091992.1 MGP_NODShiLtJ_G0034633.1 mouse_genomes_project 9 59013733 59041497 + MGP_NODShiLtJ_P0091992 Chrna5 protein_coding protein_coding MGP_NODShiLtJ_T0091993.1 MGP_NODShiLtJ_G0034633.1 mouse_genomes_project 9 59014469 59040293 + MGP_NODShiLtJ_P0091993 Chrna5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094199.1 MGP_NODShiLtJ_G0035110.1 mouse_genomes_project 9 119265520 119308508 + MGP_NODShiLtJ_P0094199 Prkar2a protein_coding protein_coding MGP_NODShiLtJ_T0094200.1 MGP_NODShiLtJ_G0035110.1 mouse_genomes_project 9 119268343 119332166 + MGP_NODShiLtJ_P0094200 Prkar2a protein_coding protein_coding MGP_NODShiLtJ_T0094201.1 MGP_NODShiLtJ_G0035110.1 mouse_genomes_project 9 119268657 119328725 + MGP_NODShiLtJ_P0094201 Prkar2a protein_coding protein_coding MGP_NODShiLtJ_T0094202.1 MGP_NODShiLtJ_G0035110.1 mouse_genomes_project 9 119296135 119326046 + MGP_NODShiLtJ_P0094202 Prkar2a protein_coding protein_coding MGP_NODShiLtJ_T0094203.1 MGP_NODShiLtJ_G0035110.1 mouse_genomes_project 9 119320765 119322094 + Prkar2a protein_coding retained_intron MGP_NODShiLtJ_T0094204.1 MGP_NODShiLtJ_G0035110.1 mouse_genomes_project 9 119329975 119331234 + Prkar2a protein_coding processed_transcript MGP_NODShiLtJ_T0016031.1 MGP_NODShiLtJ_G0014139.1 mouse_genomes_project 9 112592642 112594143 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091389.1 MGP_NODShiLtJ_G0034399.1 mouse_genomes_project 9 40665280 40666216 + MGP_NODShiLtJ_P0091389 Olfr901 protein_coding protein_coding MGP_NODShiLtJ_T0092753.1 MGP_NODShiLtJ_G0034825.1 mouse_genomes_project 9 78952821 78965474 + MGP_NODShiLtJ_P0092753 Rsl24d1 protein_coding protein_coding MGP_NODShiLtJ_T0092754.1 MGP_NODShiLtJ_G0034825.1 mouse_genomes_project 9 78952843 78966053 + MGP_NODShiLtJ_P0092754 Rsl24d1 protein_coding protein_coding MGP_NODShiLtJ_T0092755.1 MGP_NODShiLtJ_G0034825.1 mouse_genomes_project 9 78952898 78965331 + MGP_NODShiLtJ_P0092755 Rsl24d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015957.1 MGP_NODShiLtJ_G0014065.1 mouse_genomes_project 9 81146483 81147823 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092202.1 MGP_NODShiLtJ_G0034696.1 mouse_genomes_project 9 63835168 63868121 - MGP_NODShiLtJ_P0092202 Bbs4 protein_coding protein_coding MGP_NODShiLtJ_T0091649.1 MGP_NODShiLtJ_G0034520.1 mouse_genomes_project 9 48083757 48162084 - MGP_NODShiLtJ_P0091649 Kmt2a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091650.1 MGP_NODShiLtJ_G0034520.1 mouse_genomes_project 9 48083758 48162084 - MGP_NODShiLtJ_P0091650 Kmt2a protein_coding protein_coding MGP_NODShiLtJ_T0091651.1 MGP_NODShiLtJ_G0034520.1 mouse_genomes_project 9 48083758 48162106 - MGP_NODShiLtJ_P0091651 Kmt2a protein_coding protein_coding MGP_NODShiLtJ_T0091652.1 MGP_NODShiLtJ_G0034520.1 mouse_genomes_project 9 48095047 48100483 - MGP_NODShiLtJ_P0091652 Kmt2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091653.1 MGP_NODShiLtJ_G0034520.1 mouse_genomes_project 9 48103102 48128487 - MGP_NODShiLtJ_P0091653 Kmt2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091654.1 MGP_NODShiLtJ_G0034520.1 mouse_genomes_project 9 48121866 48162106 - MGP_NODShiLtJ_P0091654 Kmt2a protein_coding protein_coding MGP_NODShiLtJ_T0092812.1 MGP_NODShiLtJ_G0034842.1 mouse_genomes_project 9 81896058 82038995 + MGP_NODShiLtJ_P0092812 Bmp5 protein_coding protein_coding MGP_NODShiLtJ_T0092813.1 MGP_NODShiLtJ_G0034842.1 mouse_genomes_project 9 81957183 81973400 + Bmp5 protein_coding processed_transcript MGP_NODShiLtJ_T0093325.1 MGP_NODShiLtJ_G0034961.1 mouse_genomes_project 9 108531375 108532271 + MGP_NODShiLtJ_P0093325 protein_coding protein_coding MGP_NODShiLtJ_T0092377.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69359313 69704338 + MGP_NODShiLtJ_P0092377 Megf11 protein_coding protein_coding MGP_NODShiLtJ_T0092378.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69359313 69712568 + MGP_NODShiLtJ_P0092378 Megf11 protein_coding protein_coding MGP_NODShiLtJ_T0092379.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69359313 69710653 + MGP_NODShiLtJ_P0092379 Megf11 protein_coding protein_coding MGP_NODShiLtJ_T0092380.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69359370 69635902 + Megf11 protein_coding retained_intron MGP_NODShiLtJ_T0092381.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69359373 69712568 + MGP_NODShiLtJ_P0092381 Megf11 protein_coding protein_coding MGP_NODShiLtJ_T0092382.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69478866 69486602 + Megf11 protein_coding processed_transcript MGP_NODShiLtJ_T0092383.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69479131 69691116 + Megf11 protein_coding retained_intron MGP_NODShiLtJ_T0092384.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69529125 69624474 + Megf11 protein_coding processed_transcript MGP_NODShiLtJ_T0092385.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69646445 69695768 + MGP_NODShiLtJ_P0092385 Megf11 protein_coding protein_coding MGP_NODShiLtJ_T0092386.1 MGP_NODShiLtJ_G0034739.1 mouse_genomes_project 9 69697143 69709296 + Megf11 protein_coding processed_transcript MGP_NODShiLtJ_T0092087.1 MGP_NODShiLtJ_G0034658.1 mouse_genomes_project 9 61399091 61404423 - MGP_NODShiLtJ_P0092087 Neil1 protein_coding protein_coding MGP_NODShiLtJ_T0092088.1 MGP_NODShiLtJ_G0034658.1 mouse_genomes_project 9 61399361 61404601 - MGP_NODShiLtJ_P0092088 Neil1 protein_coding protein_coding MGP_NODShiLtJ_T0092089.1 MGP_NODShiLtJ_G0034658.1 mouse_genomes_project 9 61399547 61403330 - MGP_NODShiLtJ_P0092089 Neil1 protein_coding protein_coding MGP_NODShiLtJ_T0009176.1 MGP_NODShiLtJ_G0007367.1 mouse_genomes_project 9 67638651 67644680 + Gm26609 lincRNA lincRNA MGP_NODShiLtJ_T0002349.1 MGP_NODShiLtJ_G0002259.1 mouse_genomes_project 9 94509432 94509904 - TEC TEC MGP_NODShiLtJ_T0002350.1 MGP_NODShiLtJ_G0002259.1 mouse_genomes_project 9 94509432 94509546 - TEC TEC MGP_NODShiLtJ_T0091264.1 MGP_NODShiLtJ_G0034340.1 mouse_genomes_project 9 37316767 37319853 - MGP_NODShiLtJ_P0091264 Pate3 protein_coding protein_coding MGP_NODShiLtJ_T0090991.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21704972 21801268 + MGP_NODShiLtJ_P0090991 Dnm2 protein_coding protein_coding MGP_NODShiLtJ_T0090992.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21704996 21800652 + MGP_NODShiLtJ_P0090992 Dnm2 protein_coding protein_coding MGP_NODShiLtJ_T0090993.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21705009 21800654 + MGP_NODShiLtJ_P0090993 Dnm2 protein_coding protein_coding MGP_NODShiLtJ_T0090994.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21705032 21756585 + MGP_NODShiLtJ_P0090994 Dnm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090995.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21705035 21800640 + MGP_NODShiLtJ_P0090995 Dnm2 protein_coding protein_coding MGP_NODShiLtJ_T0090996.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21705040 21800638 + MGP_NODShiLtJ_P0090996 Dnm2 protein_coding protein_coding MGP_NODShiLtJ_T0090997.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21705160 21799916 + MGP_NODShiLtJ_P0090997 Dnm2 protein_coding protein_coding MGP_NODShiLtJ_T0090998.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21705160 21784473 + MGP_NODShiLtJ_P0090998 Dnm2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090999.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21705307 21786040 + Dnm2 protein_coding processed_transcript MGP_NODShiLtJ_T0091000.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21705308 21801268 + MGP_NODShiLtJ_P0091000 Dnm2 protein_coding protein_coding MGP_NODShiLtJ_T0091001.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21737311 21737775 + Dnm2 protein_coding processed_transcript MGP_NODShiLtJ_T0091002.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21770901 21793962 + MGP_NODShiLtJ_P0091002 Dnm2 protein_coding protein_coding MGP_NODShiLtJ_T0091003.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21774723 21801273 + Dnm2 protein_coding retained_intron MGP_NODShiLtJ_T0091004.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21788557 21798136 + Dnm2 protein_coding retained_intron MGP_NODShiLtJ_T0091005.1 MGP_NODShiLtJ_G0034252.1 mouse_genomes_project 9 21798620 21799913 + Dnm2 protein_coding processed_transcript MGP_NODShiLtJ_T0092041.1 MGP_NODShiLtJ_G0034647.1 mouse_genomes_project 9 60372917 60418564 - MGP_NODShiLtJ_P0092041 Peak1 protein_coding protein_coding MGP_NODShiLtJ_T0092042.1 MGP_NODShiLtJ_G0034647.1 mouse_genomes_project 9 60372918 60436143 - MGP_NODShiLtJ_P0092042 Peak1 protein_coding protein_coding MGP_NODShiLtJ_T0092043.1 MGP_NODShiLtJ_G0034647.1 mouse_genomes_project 9 60436057 60613042 - MGP_NODShiLtJ_P0092043 Peak1 protein_coding protein_coding MGP_NODShiLtJ_T0092044.1 MGP_NODShiLtJ_G0034647.1 mouse_genomes_project 9 60611696 60613050 - Peak1 protein_coding retained_intron MGP_NODShiLtJ_T0091371.1 MGP_NODShiLtJ_G0034382.1 mouse_genomes_project 9 40129550 40130480 + MGP_NODShiLtJ_P0091371 Olfr883 protein_coding protein_coding MGP_NODShiLtJ_T0091531.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47254119 47283954 + MGP_NODShiLtJ_P0091531 Usp2 protein_coding protein_coding MGP_NODShiLtJ_T0091532.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47254176 47282283 + MGP_NODShiLtJ_P0091532 Usp2 protein_coding protein_coding MGP_NODShiLtJ_T0091533.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47256521 47282323 + MGP_NODShiLtJ_P0091533 Usp2 protein_coding protein_coding MGP_NODShiLtJ_T0091534.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47259284 47263005 + MGP_NODShiLtJ_P0091534 Usp2 protein_coding protein_coding MGP_NODShiLtJ_T0091535.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47273294 47282280 + MGP_NODShiLtJ_P0091535 Usp2 protein_coding protein_coding MGP_NODShiLtJ_T0091536.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47273295 47282808 + MGP_NODShiLtJ_P0091536 Usp2 protein_coding protein_coding MGP_NODShiLtJ_T0091537.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47275534 47280861 + MGP_NODShiLtJ_P0091537 Usp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091538.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47280828 47282694 + Usp2 protein_coding processed_transcript MGP_NODShiLtJ_T0091539.1 MGP_NODShiLtJ_G0034487.1 mouse_genomes_project 9 47281034 47282287 + Usp2 protein_coding processed_transcript MGP_NODShiLtJ_T0009234.1 MGP_NODShiLtJ_G0007412.1 mouse_genomes_project 9 109079777 109081236 + Gm28087 lincRNA lincRNA MGP_NODShiLtJ_T0091384.1 MGP_NODShiLtJ_G0034394.1 mouse_genomes_project 9 40514263 40515331 + MGP_NODShiLtJ_P0091384 Olfr25 protein_coding protein_coding MGP_NODShiLtJ_T0100881.1 MGP_NODShiLtJ_G0039275.1 mouse_genomes_project 9 43723338 43723424 + Snord14d snoRNA snoRNA MGP_NODShiLtJ_T0094869.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135135644 135183037 - MGP_NODShiLtJ_P0094869 Zdhhc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094870.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135143800 135183095 - MGP_NODShiLtJ_P0094870 Zdhhc3 protein_coding protein_coding MGP_NODShiLtJ_T0094871.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135146482 135183070 - MGP_NODShiLtJ_P0094871 Zdhhc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094872.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135147150 135183056 - MGP_NODShiLtJ_P0094872 Zdhhc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094873.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135147690 135183068 - MGP_NODShiLtJ_P0094873 Zdhhc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094874.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135147950 135170292 - MGP_NODShiLtJ_P0094874 Zdhhc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094875.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135150008 135183011 - MGP_NODShiLtJ_P0094875 Zdhhc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094876.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135152498 135183094 - Zdhhc3 protein_coding retained_intron MGP_NODShiLtJ_T0094877.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135153946 135183014 - MGP_NODShiLtJ_P0094877 Zdhhc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094878.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135159016 135183068 - MGP_NODShiLtJ_P0094878 Zdhhc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094879.1 MGP_NODShiLtJ_G0035270.1 mouse_genomes_project 9 135170262 135182722 - MGP_NODShiLtJ_P0094879 Zdhhc3 protein_coding protein_coding MGP_NODShiLtJ_T0091781.1 MGP_NODShiLtJ_G0034561.1 mouse_genomes_project 9 52051977 52052597 + MGP_NODShiLtJ_P0091781 Gm5617 protein_coding protein_coding MGP_NODShiLtJ_T0092953.1 MGP_NODShiLtJ_G0034878.1 mouse_genomes_project 9 88749370 88754890 - MGP_NODShiLtJ_P0092953 Htr1b protein_coding protein_coding MGP_NODShiLtJ_T0092954.1 MGP_NODShiLtJ_G0034878.1 mouse_genomes_project 9 88752400 88753673 - MGP_NODShiLtJ_P0092954 Htr1b protein_coding protein_coding MGP_NODShiLtJ_T0094230.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119442349 119443350 + Slc26a6 protein_coding processed_transcript MGP_NODShiLtJ_T0094231.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119442414 119452162 + MGP_NODShiLtJ_P0094231 Slc26a6 protein_coding protein_coding MGP_NODShiLtJ_T0094232.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119443102 119450847 + MGP_NODShiLtJ_P0094232 Slc26a6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094233.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119443102 119456122 + MGP_NODShiLtJ_P0094233 Slc26a6 protein_coding protein_coding MGP_NODShiLtJ_T0094234.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119443108 119452162 + MGP_NODShiLtJ_P0094234 Slc26a6 protein_coding protein_coding MGP_NODShiLtJ_T0094235.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119443139 119452162 + Slc26a6 protein_coding retained_intron MGP_NODShiLtJ_T0094236.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119443159 119452162 + Slc26a6 protein_coding retained_intron MGP_NODShiLtJ_T0094237.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119443200 119452162 + MGP_NODShiLtJ_P0094237 Slc26a6 protein_coding protein_coding MGP_NODShiLtJ_T0094238.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119445679 119452162 + MGP_NODShiLtJ_P0094238 Slc26a6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094239.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119445841 119456617 + MGP_NODShiLtJ_P0094239 Slc26a6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094240.1 MGP_NODShiLtJ_G0035114.1 mouse_genomes_project 9 119455973 119456613 + MGP_NODShiLtJ_P0094240 Slc26a6 protein_coding protein_coding MGP_NODShiLtJ_T0092312.1 MGP_NODShiLtJ_G0034721.1 mouse_genomes_project 9 67625639 67648024 - MGP_NODShiLtJ_P0092312 Fem1b protein_coding protein_coding MGP_NODShiLtJ_T0093057.1 MGP_NODShiLtJ_G0034896.1 mouse_genomes_project 9 94738511 94753104 + MGP_NODShiLtJ_P0093057 Prss35 protein_coding protein_coding MGP_NODShiLtJ_T0093058.1 MGP_NODShiLtJ_G0034896.1 mouse_genomes_project 9 94738511 94753275 + MGP_NODShiLtJ_P0093058 Prss35 protein_coding protein_coding MGP_NODShiLtJ_T0091355.1 MGP_NODShiLtJ_G0034370.1 mouse_genomes_project 9 39620718 39631139 - MGP_NODShiLtJ_P0091355 Spa17 protein_coding protein_coding MGP_NODShiLtJ_T0093157.1 MGP_NODShiLtJ_G0034923.1 mouse_genomes_project 9 98552267 98624338 - MGP_NODShiLtJ_P0093157 Tbc1d2b protein_coding protein_coding MGP_NODShiLtJ_T0093158.1 MGP_NODShiLtJ_G0034923.1 mouse_genomes_project 9 98580572 98624373 - MGP_NODShiLtJ_P0093158 Tbc1d2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093159.1 MGP_NODShiLtJ_G0034923.1 mouse_genomes_project 9 98589799 98624340 - MGP_NODShiLtJ_P0093159 Tbc1d2b protein_coding protein_coding MGP_NODShiLtJ_T0093160.1 MGP_NODShiLtJ_G0034923.1 mouse_genomes_project 9 98592682 98607447 - Tbc1d2b protein_coding processed_transcript MGP_NODShiLtJ_T0098113.1 MGP_NODShiLtJ_G0036525.1 mouse_genomes_project 9 106044053 106044169 - n-R5s87 rRNA rRNA MGP_NODShiLtJ_T0091614.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941253 47983043 - MGP_NODShiLtJ_P0091614 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091615.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941257 47991154 - MGP_NODShiLtJ_P0091615 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091616.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941257 47968218 - MGP_NODShiLtJ_P0091616 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091617.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941257 47968193 - MGP_NODShiLtJ_P0091617 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091618.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941257 47983022 - MGP_NODShiLtJ_P0091618 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091619.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941257 47970569 - MGP_NODShiLtJ_P0091619 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091620.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941259 47956677 - MGP_NODShiLtJ_P0091620 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091621.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941259 47983043 - MGP_NODShiLtJ_P0091621 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091622.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47941259 47971326 - MGP_NODShiLtJ_P0091622 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091623.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47942583 47952789 - Phldb1 protein_coding retained_intron MGP_NODShiLtJ_T0091624.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47949407 47951375 - Phldb1 protein_coding retained_intron MGP_NODShiLtJ_T0091625.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47952677 47959052 - MGP_NODShiLtJ_P0091625 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091626.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47955905 47965900 - MGP_NODShiLtJ_P0091626 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091627.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47958516 47963371 - MGP_NODShiLtJ_P0091627 Phldb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091628.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47971069 47976367 - MGP_NODShiLtJ_P0091628 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091629.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47971239 47976330 - MGP_NODShiLtJ_P0091629 Phldb1 protein_coding protein_coding MGP_NODShiLtJ_T0091630.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47973277 47982293 - Phldb1 protein_coding retained_intron MGP_NODShiLtJ_T0091631.1 MGP_NODShiLtJ_G0034515.1 mouse_genomes_project 9 47980952 47981429 - Phldb1 protein_coding processed_transcript MGP_NODShiLtJ_T0092264.1 MGP_NODShiLtJ_G0034711.1 mouse_genomes_project 9 65518343 65535743 - MGP_NODShiLtJ_P0092264 Gm9869 protein_coding protein_coding MGP_NODShiLtJ_T0091548.1 MGP_NODShiLtJ_G0034490.1 mouse_genomes_project 9 47295544 47297487 + MGP_NODShiLtJ_P0091548 C1qtnf5 protein_coding protein_coding MGP_NODShiLtJ_T0091549.1 MGP_NODShiLtJ_G0034490.1 mouse_genomes_project 9 47295553 47297485 + MGP_NODShiLtJ_P0091549 C1qtnf5 protein_coding protein_coding MGP_NODShiLtJ_T0091550.1 MGP_NODShiLtJ_G0034490.1 mouse_genomes_project 9 47295573 47297484 + MGP_NODShiLtJ_P0091550 C1qtnf5 protein_coding protein_coding MGP_NODShiLtJ_T0091551.1 MGP_NODShiLtJ_G0034490.1 mouse_genomes_project 9 47295608 47296793 + MGP_NODShiLtJ_P0091551 C1qtnf5 protein_coding protein_coding MGP_NODShiLtJ_T0091552.1 MGP_NODShiLtJ_G0034490.1 mouse_genomes_project 9 47295613 47297484 + MGP_NODShiLtJ_P0091552 C1qtnf5 protein_coding protein_coding MGP_NODShiLtJ_T0091553.1 MGP_NODShiLtJ_G0034490.1 mouse_genomes_project 9 47295620 47296207 + MGP_NODShiLtJ_P0091553 C1qtnf5 protein_coding protein_coding MGP_NODShiLtJ_T0091554.1 MGP_NODShiLtJ_G0034490.1 mouse_genomes_project 9 47295674 47297072 + MGP_NODShiLtJ_P0091554 C1qtnf5 protein_coding protein_coding MGP_NODShiLtJ_T0091555.1 MGP_NODShiLtJ_G0034490.1 mouse_genomes_project 9 47295814 47296844 + MGP_NODShiLtJ_P0091555 C1qtnf5 protein_coding protein_coding MGP_NODShiLtJ_T0093304.1 MGP_NODShiLtJ_G0034953.1 mouse_genomes_project 9 107910119 108027609 + MGP_NODShiLtJ_P0093304 Nmnat3 protein_coding protein_coding MGP_NODShiLtJ_T0093305.1 MGP_NODShiLtJ_G0034953.1 mouse_genomes_project 9 107910139 107990988 + Nmnat3 protein_coding processed_transcript MGP_NODShiLtJ_T0093306.1 MGP_NODShiLtJ_G0034953.1 mouse_genomes_project 9 107919279 107978025 + Nmnat3 protein_coding retained_intron MGP_NODShiLtJ_T0093307.1 MGP_NODShiLtJ_G0034953.1 mouse_genomes_project 9 107919279 108051310 + MGP_NODShiLtJ_P0093307 Nmnat3 protein_coding protein_coding MGP_NODShiLtJ_T0093309.1 MGP_NODShiLtJ_G0034953.1 mouse_genomes_project 9 107976323 108041305 + MGP_NODShiLtJ_P0093309 Nmnat3 protein_coding protein_coding MGP_NODShiLtJ_T0090938.1 MGP_NODShiLtJ_G0034227.1 mouse_genomes_project 9 21100914 21106500 + MGP_NODShiLtJ_P0090938 A230050P20Rik protein_coding protein_coding MGP_NODShiLtJ_T0090939.1 MGP_NODShiLtJ_G0034227.1 mouse_genomes_project 9 21100930 21106500 + A230050P20Rik protein_coding retained_intron MGP_NODShiLtJ_T0090940.1 MGP_NODShiLtJ_G0034227.1 mouse_genomes_project 9 21100952 21102302 + A230050P20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0090941.1 MGP_NODShiLtJ_G0034227.1 mouse_genomes_project 9 21101483 21105978 + A230050P20Rik protein_coding retained_intron MGP_NODShiLtJ_T0090942.1 MGP_NODShiLtJ_G0034227.1 mouse_genomes_project 9 21102978 21105328 + A230050P20Rik protein_coding retained_intron MGP_NODShiLtJ_T0093639.1 MGP_NODShiLtJ_G0035024.1 mouse_genomes_project 9 116528225 116532510 + MGP_NODShiLtJ_P0093639 Tlr9 protein_coding protein_coding MGP_NODShiLtJ_T0094612.1 MGP_NODShiLtJ_G0035180.1 mouse_genomes_project 9 125253730 125298011 + MGP_NODShiLtJ_P0094612 Susd5 protein_coding protein_coding MGP_NODShiLtJ_T0094427.1 MGP_NODShiLtJ_G0035146.1 mouse_genomes_project 9 121341346 121354304 + MGP_NODShiLtJ_P0094427 Kif9 protein_coding protein_coding MGP_NODShiLtJ_T0094428.1 MGP_NODShiLtJ_G0035146.1 mouse_genomes_project 9 121341382 121396334 + MGP_NODShiLtJ_P0094428 Kif9 protein_coding protein_coding MGP_NODShiLtJ_T0094429.1 MGP_NODShiLtJ_G0035146.1 mouse_genomes_project 9 121341382 121396193 + MGP_NODShiLtJ_P0094429 Kif9 protein_coding protein_coding MGP_NODShiLtJ_T0094430.1 MGP_NODShiLtJ_G0035146.1 mouse_genomes_project 9 121341382 121393286 + MGP_NODShiLtJ_P0094430 Kif9 protein_coding protein_coding MGP_NODShiLtJ_T0094431.1 MGP_NODShiLtJ_G0035146.1 mouse_genomes_project 9 121341407 121394992 + MGP_NODShiLtJ_P0094431 Kif9 protein_coding protein_coding MGP_NODShiLtJ_T0099618.1 MGP_NODShiLtJ_G0038012.1 mouse_genomes_project 9 76095860 76095968 + Gm22229 snRNA snRNA MGP_NODShiLtJ_T0091088.1 MGP_NODShiLtJ_G0034289.1 mouse_genomes_project 9 23728702 24012959 + MGP_NODShiLtJ_P0091088 Bmper protein_coding protein_coding MGP_NODShiLtJ_T0092975.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90543685 90544563 - Hmgn3 protein_coding processed_transcript MGP_NODShiLtJ_T0092976.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90543685 90580728 - MGP_NODShiLtJ_P0092976 Hmgn3 protein_coding protein_coding MGP_NODShiLtJ_T0092977.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90543685 90580808 - MGP_NODShiLtJ_P0092977 Hmgn3 protein_coding protein_coding MGP_NODShiLtJ_T0092978.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90543685 90580593 - MGP_NODShiLtJ_P0092978 Hmgn3 protein_coding protein_coding MGP_NODShiLtJ_T0092979.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90543685 90580653 - MGP_NODShiLtJ_P0092979 Hmgn3 protein_coding protein_coding MGP_NODShiLtJ_T0092980.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90543705 90544869 - Hmgn3 protein_coding retained_intron MGP_NODShiLtJ_T0092981.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90543918 90546307 - Hmgn3 protein_coding retained_intron MGP_NODShiLtJ_T0092982.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90544115 90580640 - MGP_NODShiLtJ_P0092982 Hmgn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092983.1 MGP_NODShiLtJ_G0034882.1 mouse_genomes_project 9 90544457 90544831 - Hmgn3 protein_coding retained_intron MGP_NODShiLtJ_T0011630.1 MGP_NODShiLtJ_G0009763.1 mouse_genomes_project 9 84759470 84759801 - Rn7sk misc_RNA misc_RNA MGP_NODShiLtJ_T0002389.1 MGP_NODShiLtJ_G0002298.1 mouse_genomes_project 9 112005048 112006096 + TEC TEC MGP_NODShiLtJ_T0093475.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113289295 113315539 - MGP_NODShiLtJ_P0093475 Trf protein_coding protein_coding MGP_NODShiLtJ_T0093476.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113294085 113315710 - MGP_NODShiLtJ_P0093476 Trf protein_coding protein_coding MGP_NODShiLtJ_T0093477.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113294315 113297266 - Trf protein_coding retained_intron MGP_NODShiLtJ_T0093478.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113295829 113305165 - MGP_NODShiLtJ_P0093478 Trf protein_coding protein_coding MGP_NODShiLtJ_T0093479.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113295897 113307370 - MGP_NODShiLtJ_P0093479 Trf protein_coding protein_coding MGP_NODShiLtJ_T0093480.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113301094 113315536 - MGP_NODShiLtJ_P0093480 Trf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093481.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113306193 113307984 - Trf protein_coding retained_intron MGP_NODShiLtJ_T0093482.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113307403 113315532 - MGP_NODShiLtJ_P0093482 Trf protein_coding protein_coding MGP_NODShiLtJ_T0093483.1 MGP_NODShiLtJ_G0034996.1 mouse_genomes_project 9 113308393 113313761 - MGP_NODShiLtJ_P0093483 Trf protein_coding protein_coding MGP_NODShiLtJ_T0010967.1 MGP_NODShiLtJ_G0009100.1 mouse_genomes_project 9 70004959 70005084 - Gm25640 miRNA miRNA MGP_NODShiLtJ_T0091398.1 MGP_NODShiLtJ_G0034408.1 mouse_genomes_project 9 40900096 40901047 + MGP_NODShiLtJ_P0091398 Olfr914 protein_coding protein_coding MGP_NODShiLtJ_T0091663.1 MGP_NODShiLtJ_G0034523.1 mouse_genomes_project 9 48253366 48266238 - MGP_NODShiLtJ_P0091663 Cd3g protein_coding protein_coding MGP_NODShiLtJ_T0091664.1 MGP_NODShiLtJ_G0034523.1 mouse_genomes_project 9 48253548 48254612 - Cd3g protein_coding retained_intron MGP_NODShiLtJ_T0091665.1 MGP_NODShiLtJ_G0034523.1 mouse_genomes_project 9 48258152 48266238 - MGP_NODShiLtJ_P0091665 Cd3g protein_coding protein_coding MGP_NODShiLtJ_T0015958.1 MGP_NODShiLtJ_G0014066.1 mouse_genomes_project 9 81186606 81187829 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100926.1 MGP_NODShiLtJ_G0039320.1 mouse_genomes_project 9 123562366 123562498 + Gm24957 snoRNA snoRNA MGP_NODShiLtJ_T0009231.1 MGP_NODShiLtJ_G0007409.1 mouse_genomes_project 9 106604741 106611342 + Gm26767 lincRNA lincRNA MGP_NODShiLtJ_T0005471.1 MGP_NODShiLtJ_G0004612.1 mouse_genomes_project 9 117719329 117720788 - Gm17041 antisense antisense MGP_NODShiLtJ_T0091505.1 MGP_NODShiLtJ_G0034474.1 mouse_genomes_project 9 45317023 45327239 - MGP_NODShiLtJ_P0091505 Sc5d protein_coding protein_coding MGP_NODShiLtJ_T0091506.1 MGP_NODShiLtJ_G0034474.1 mouse_genomes_project 9 45317593 45327139 - MGP_NODShiLtJ_P0091506 Sc5d protein_coding protein_coding MGP_NODShiLtJ_T0094854.1 MGP_NODShiLtJ_G0035262.1 mouse_genomes_project 9 134887609 134894003 - MGP_NODShiLtJ_P0094854 Gm35549 protein_coding protein_coding MGP_NODShiLtJ_T0094855.1 MGP_NODShiLtJ_G0035262.1 mouse_genomes_project 9 134887609 134894003 - MGP_NODShiLtJ_P0094855 Gm35549 protein_coding protein_coding MGP_NODShiLtJ_T0094856.1 MGP_NODShiLtJ_G0035262.1 mouse_genomes_project 9 134887609 134894003 - MGP_NODShiLtJ_P0094856 Gm35549 protein_coding protein_coding MGP_NODShiLtJ_T0016041.1 MGP_NODShiLtJ_G0014149.1 mouse_genomes_project 9 118659633 118660156 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009172.1 MGP_NODShiLtJ_G0007365.1 mouse_genomes_project 9 65434633 65461808 + 1700036A12Rik lincRNA lincRNA MGP_NODShiLtJ_T0009173.1 MGP_NODShiLtJ_G0007365.1 mouse_genomes_project 9 65461133 65461487 + 1700036A12Rik lincRNA lincRNA MGP_NODShiLtJ_T0098102.1 MGP_NODShiLtJ_G0036514.1 mouse_genomes_project 9 11673262 11673383 + Gm25365 rRNA rRNA MGP_NODShiLtJ_T0091445.1 MGP_NODShiLtJ_G0034443.1 mouse_genomes_project 9 42416382 42417321 + MGP_NODShiLtJ_P0091445 Olfr965 protein_coding protein_coding MGP_NODShiLtJ_T0097851.1 MGP_NODShiLtJ_G0036263.1 mouse_genomes_project 9 42366899 42367802 - pseudogene pseudogene MGP_NODShiLtJ_T0092094.1 MGP_NODShiLtJ_G0034663.1 mouse_genomes_project 9 61762979 61789767 - MGP_NODShiLtJ_P0092094 Scamp5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0016026.1 MGP_NODShiLtJ_G0014134.1 mouse_genomes_project 9 111012926 111013290 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099641.1 MGP_NODShiLtJ_G0038035.1 mouse_genomes_project 9 117477903 117478010 + Gm22454 snRNA snRNA MGP_NODShiLtJ_T0091668.1 MGP_NODShiLtJ_G0034526.1 mouse_genomes_project 9 48334272 48345768 + MGP_NODShiLtJ_P0091668 Mpzl2 protein_coding protein_coding MGP_NODShiLtJ_T0091602.1 MGP_NODShiLtJ_G0034508.1 mouse_genomes_project 9 47618714 47626428 - MGP_NODShiLtJ_P0091602 Ccdc84 protein_coding protein_coding MGP_NODShiLtJ_T0090911.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20836552 20856756 - MGP_NODShiLtJ_P0090911 Fbxl12 protein_coding protein_coding MGP_NODShiLtJ_T0090912.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20836664 20859190 - Fbxl12 protein_coding processed_transcript MGP_NODShiLtJ_T0090913.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20851221 20859202 - MGP_NODShiLtJ_P0090913 Fbxl12 protein_coding protein_coding MGP_NODShiLtJ_T0090914.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20851258 20852813 - MGP_NODShiLtJ_P0090914 Fbxl12 protein_coding protein_coding MGP_NODShiLtJ_T0090915.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20851258 20859190 - MGP_NODShiLtJ_P0090915 Fbxl12 protein_coding protein_coding MGP_NODShiLtJ_T0090916.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20851259 20859202 - MGP_NODShiLtJ_P0090916 Fbxl12 protein_coding protein_coding MGP_NODShiLtJ_T0090917.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20851261 20859214 - MGP_NODShiLtJ_P0090917 Fbxl12 protein_coding protein_coding MGP_NODShiLtJ_T0090918.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20851261 20857249 - MGP_NODShiLtJ_P0090918 Fbxl12 protein_coding protein_coding MGP_NODShiLtJ_T0090919.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20852273 20859205 - MGP_NODShiLtJ_P0090919 Fbxl12 protein_coding protein_coding MGP_NODShiLtJ_T0090920.1 MGP_NODShiLtJ_G0034221.1 mouse_genomes_project 9 20856005 20859185 - Fbxl12 protein_coding retained_intron MGP_NODShiLtJ_T0092512.1 MGP_NODShiLtJ_G0034777.1 mouse_genomes_project 9 72062164 72064200 + MGP_NODShiLtJ_P0092512 Gm10647 protein_coding protein_coding MGP_NODShiLtJ_T0094316.1 MGP_NODShiLtJ_G0035129.1 mouse_genomes_project 9 119909546 119917331 - MGP_NODShiLtJ_P0094316 protein_coding protein_coding MGP_NODShiLtJ_T0016019.1 MGP_NODShiLtJ_G0014127.1 mouse_genomes_project 9 106799068 106799354 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099583.1 MGP_NODShiLtJ_G0037977.1 mouse_genomes_project 9 7345522 7345584 + Gm22815 snRNA snRNA MGP_NODShiLtJ_T0002367.1 MGP_NODShiLtJ_G0002276.1 mouse_genomes_project 9 101513918 101517987 - TEC TEC MGP_NODShiLtJ_T0094865.1 MGP_NODShiLtJ_G0035269.1 mouse_genomes_project 9 135102561 135103654 + Tgm4 protein_coding processed_transcript MGP_NODShiLtJ_T0094866.1 MGP_NODShiLtJ_G0035269.1 mouse_genomes_project 9 135102563 135120982 + Tgm4 protein_coding processed_transcript MGP_NODShiLtJ_T0094867.1 MGP_NODShiLtJ_G0035269.1 mouse_genomes_project 9 135102563 135137041 + MGP_NODShiLtJ_P0094867 Tgm4 protein_coding protein_coding MGP_NODShiLtJ_T0094868.1 MGP_NODShiLtJ_G0035269.1 mouse_genomes_project 9 135108194 135118231 + Tgm4 protein_coding retained_intron MGP_NODShiLtJ_T0002398.1 MGP_NODShiLtJ_G0002307.1 mouse_genomes_project 9 113706086 113707674 - TEC TEC MGP_NODShiLtJ_T0000341.1 MGP_NODShiLtJ_G0000279.1 mouse_genomes_project 9 135177235 135177306 + mt-Tn Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0015907.1 MGP_NODShiLtJ_G0014015.1 mouse_genomes_project 9 22947313 22947826 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091330.1 MGP_NODShiLtJ_G0034360.1 mouse_genomes_project 9 39170774 39188339 + MGP_NODShiLtJ_P0091330 Tmem218 protein_coding protein_coding MGP_NODShiLtJ_T0094858.1 MGP_NODShiLtJ_G0035264.1 mouse_genomes_project 9 134945218 134958068 + MGP_NODShiLtJ_P0094858 Zkscan7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0015990.1 MGP_NODShiLtJ_G0014098.1 mouse_genomes_project 9 96764701 96765035 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091586.1 MGP_NODShiLtJ_G0034499.1 mouse_genomes_project 9 47513060 47524091 - MGP_NODShiLtJ_P0091586 C2cd2l protein_coding protein_coding MGP_NODShiLtJ_T0098105.1 MGP_NODShiLtJ_G0036517.1 mouse_genomes_project 9 38980186 38980295 + n-R5s82 rRNA rRNA MGP_NODShiLtJ_T0093260.1 MGP_NODShiLtJ_G0034945.1 mouse_genomes_project 9 105959141 105968351 - MGP_NODShiLtJ_P0093260 protein_coding protein_coding MGP_NODShiLtJ_T0018377.1 MGP_NODShiLtJ_G0015608.1 mouse_genomes_project 9 69005993 69012197 + Scarletltr processed_transcript processed_transcript MGP_NODShiLtJ_T0093634.1 MGP_NODShiLtJ_G0035023.1 mouse_genomes_project 9 116506308 116521012 + MGP_NODShiLtJ_P0093634 Twf2 protein_coding protein_coding MGP_NODShiLtJ_T0093635.1 MGP_NODShiLtJ_G0035023.1 mouse_genomes_project 9 116506337 116517866 + MGP_NODShiLtJ_P0093635 Twf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093636.1 MGP_NODShiLtJ_G0035023.1 mouse_genomes_project 9 116506345 116518445 + MGP_NODShiLtJ_P0093636 Twf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093637.1 MGP_NODShiLtJ_G0035023.1 mouse_genomes_project 9 116510854 116521010 + MGP_NODShiLtJ_P0093637 Twf2 protein_coding protein_coding MGP_NODShiLtJ_T0093638.1 MGP_NODShiLtJ_G0035023.1 mouse_genomes_project 9 116519850 116520644 + Twf2 protein_coding retained_intron MGP_NODShiLtJ_T0090824.1 MGP_NODShiLtJ_G0034169.1 mouse_genomes_project 9 14558100 14626953 - MGP_NODShiLtJ_P0090824 Ccdc67 protein_coding protein_coding MGP_NODShiLtJ_T0090825.1 MGP_NODShiLtJ_G0034169.1 mouse_genomes_project 9 14558106 14629643 - MGP_NODShiLtJ_P0090825 Ccdc67 protein_coding protein_coding MGP_NODShiLtJ_T0090826.1 MGP_NODShiLtJ_G0034169.1 mouse_genomes_project 9 14558792 14629613 - MGP_NODShiLtJ_P0090826 Ccdc67 protein_coding protein_coding MGP_NODShiLtJ_T0090827.1 MGP_NODShiLtJ_G0034169.1 mouse_genomes_project 9 14574206 14587044 - Ccdc67 protein_coding processed_transcript MGP_NODShiLtJ_T0090828.1 MGP_NODShiLtJ_G0034169.1 mouse_genomes_project 9 14583131 14629624 - MGP_NODShiLtJ_P0090828 Ccdc67 protein_coding protein_coding MGP_NODShiLtJ_T0092875.1 MGP_NODShiLtJ_G0034856.1 mouse_genomes_project 9 84773784 84791269 + MGP_NODShiLtJ_P0092875 Gsta4 protein_coding protein_coding MGP_NODShiLtJ_T0091074.1 MGP_NODShiLtJ_G0034286.1 mouse_genomes_project 9 22907972 22928012 - MGP_NODShiLtJ_P0091074 Rp9 protein_coding protein_coding MGP_NODShiLtJ_T0091022.1 MGP_NODShiLtJ_G0034257.1 mouse_genomes_project 9 21902606 21905855 + MGP_NODShiLtJ_P0091022 1810026J23Rik protein_coding protein_coding MGP_NODShiLtJ_T0094131.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119055908 119064137 + MGP_NODShiLtJ_P0094131 Qars protein_coding protein_coding MGP_NODShiLtJ_T0094132.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119056253 119059283 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094133.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119056253 119060394 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094134.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119056253 119059267 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094135.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119056266 119064132 + MGP_NODShiLtJ_P0094135 Qars protein_coding protein_coding MGP_NODShiLtJ_T0094136.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119057674 119064132 + MGP_NODShiLtJ_P0094136 Qars protein_coding protein_coding MGP_NODShiLtJ_T0094137.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119059745 119061593 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094138.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119059805 119061087 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094139.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119061301 119062382 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094140.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119061304 119063354 + MGP_NODShiLtJ_P0094140 Qars protein_coding protein_coding MGP_NODShiLtJ_T0094141.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119061325 119062159 + Qars protein_coding processed_transcript MGP_NODShiLtJ_T0094142.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119061739 119062326 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094143.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119061921 119062554 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094144.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119062259 119064132 + MGP_NODShiLtJ_P0094144 Qars protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094145.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119062943 119063391 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094146.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119062946 119064125 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0094147.1 MGP_NODShiLtJ_G0035101.1 mouse_genomes_project 9 119063014 119064132 + Qars protein_coding retained_intron MGP_NODShiLtJ_T0016048.1 MGP_NODShiLtJ_G0014156.1 mouse_genomes_project 9 128673600 128673962 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002319.1 MGP_NODShiLtJ_G0002229.1 mouse_genomes_project 9 77657625 77660051 - TEC TEC MGP_NODShiLtJ_T0009165.1 MGP_NODShiLtJ_G0007358.1 mouse_genomes_project 9 61320531 61321329 - 2700012I20Rik lincRNA lincRNA MGP_NODShiLtJ_T0093123.1 MGP_NODShiLtJ_G0034918.1 mouse_genomes_project 9 98030390 98043605 - MGP_NODShiLtJ_P0093123 Ankrd34c protein_coding protein_coding MGP_NODShiLtJ_T0093124.1 MGP_NODShiLtJ_G0034918.1 mouse_genomes_project 9 98033620 98043575 - MGP_NODShiLtJ_P0093124 Ankrd34c protein_coding protein_coding MGP_NODShiLtJ_T0015939.1 MGP_NODShiLtJ_G0014047.1 mouse_genomes_project 9 70999217 70999734 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094764.1 MGP_NODShiLtJ_G0035236.1 mouse_genomes_project 9 132467879 132471016 + MGP_NODShiLtJ_P0094764 Rpl14 protein_coding protein_coding MGP_NODShiLtJ_T0094765.1 MGP_NODShiLtJ_G0035237.1 mouse_genomes_project 9 132473708 132474435 + MGP_NODShiLtJ_P0094765 5830454E08Rik protein_coding protein_coding MGP_NODShiLtJ_T0091336.1 MGP_NODShiLtJ_G0034364.1 mouse_genomes_project 9 39387901 39400005 + Robo4 protein_coding retained_intron MGP_NODShiLtJ_T0091337.1 MGP_NODShiLtJ_G0034364.1 mouse_genomes_project 9 39387901 39400009 + MGP_NODShiLtJ_P0091337 Robo4 protein_coding protein_coding MGP_NODShiLtJ_T0091338.1 MGP_NODShiLtJ_G0034364.1 mouse_genomes_project 9 39388037 39400007 + MGP_NODShiLtJ_P0091338 Robo4 protein_coding protein_coding MGP_NODShiLtJ_T0091339.1 MGP_NODShiLtJ_G0034364.1 mouse_genomes_project 9 39388050 39400008 + MGP_NODShiLtJ_P0091339 Robo4 protein_coding protein_coding MGP_NODShiLtJ_T0100907.1 MGP_NODShiLtJ_G0039301.1 mouse_genomes_project 9 93667586 93667716 - Gm22830 snoRNA snoRNA MGP_NODShiLtJ_T0092349.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69069166 69114544 - MGP_NODShiLtJ_P0092349 Zwilch protein_coding protein_coding MGP_NODShiLtJ_T0092350.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69069239 69114298 - MGP_NODShiLtJ_P0092350 Zwilch protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092351.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69069734 69078648 - Zwilch protein_coding retained_intron MGP_NODShiLtJ_T0092352.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69070015 69114319 - MGP_NODShiLtJ_P0092352 Zwilch protein_coding protein_coding MGP_NODShiLtJ_T0092353.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69071925 69114334 - MGP_NODShiLtJ_P0092353 Zwilch protein_coding protein_coding MGP_NODShiLtJ_T0092354.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69072002 69086267 - MGP_NODShiLtJ_P0092354 Zwilch protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092355.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69072004 69081781 - MGP_NODShiLtJ_P0092355 Zwilch protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092356.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69078620 69091416 - Zwilch protein_coding retained_intron MGP_NODShiLtJ_T0092357.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69081797 69091665 - Zwilch protein_coding retained_intron MGP_NODShiLtJ_T0092358.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69091101 69114353 - MGP_NODShiLtJ_P0092358 Zwilch protein_coding protein_coding MGP_NODShiLtJ_T0092359.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69097834 69114346 - MGP_NODShiLtJ_P0092359 Zwilch protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092360.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69099902 69114328 - MGP_NODShiLtJ_P0092360 Zwilch protein_coding protein_coding MGP_NODShiLtJ_T0092361.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69101190 69114330 - MGP_NODShiLtJ_P0092361 Zwilch protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092362.1 MGP_NODShiLtJ_G0034733.1 mouse_genomes_project 9 69107871 69114343 - Zwilch protein_coding retained_intron MGP_NODShiLtJ_T0015982.1 MGP_NODShiLtJ_G0014090.1 mouse_genomes_project 9 94253165 94253709 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005368.1 MGP_NODShiLtJ_G0004544.1 mouse_genomes_project 9 36559849 36571181 - Kirrel3os antisense antisense MGP_NODShiLtJ_T0005440.1 MGP_NODShiLtJ_G0004591.1 mouse_genomes_project 9 105353495 105371086 - Gm16794 antisense antisense MGP_NODShiLtJ_T0005441.1 MGP_NODShiLtJ_G0004591.1 mouse_genomes_project 9 105354328 105366281 - Gm16794 antisense antisense MGP_NODShiLtJ_T0005442.1 MGP_NODShiLtJ_G0004591.1 mouse_genomes_project 9 105356379 105366290 - Gm16794 antisense antisense MGP_NODShiLtJ_T0005443.1 MGP_NODShiLtJ_G0004591.1 mouse_genomes_project 9 105357066 105367039 - Gm16794 antisense antisense MGP_NODShiLtJ_T0099604.1 MGP_NODShiLtJ_G0037998.1 mouse_genomes_project 9 56614996 56615114 + Gm22242 snRNA snRNA MGP_NODShiLtJ_T0093140.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98428974 98455808 - Morf4l1 protein_coding retained_intron MGP_NODShiLtJ_T0093141.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98430312 98455898 - MGP_NODShiLtJ_P0093141 Morf4l1 protein_coding protein_coding MGP_NODShiLtJ_T0093142.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98430396 98455457 - Morf4l1 protein_coding processed_transcript MGP_NODShiLtJ_T0093143.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98432173 98433942 - Morf4l1 protein_coding retained_intron MGP_NODShiLtJ_T0093144.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98435007 98435914 - Morf4l1 protein_coding retained_intron MGP_NODShiLtJ_T0093145.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98435432 98455827 - MGP_NODShiLtJ_P0093145 Morf4l1 protein_coding protein_coding MGP_NODShiLtJ_T0093146.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98435910 98455697 - Morf4l1 protein_coding processed_transcript MGP_NODShiLtJ_T0093147.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98435910 98455866 - MGP_NODShiLtJ_P0093147 Morf4l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093148.1 MGP_NODShiLtJ_G0034921.1 mouse_genomes_project 9 98448804 98455751 - Morf4l1 protein_coding retained_intron MGP_NODShiLtJ_T0094766.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132872053 132894374 + MGP_NODShiLtJ_P0094766 Ctnnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094767.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132876221 132904273 + MGP_NODShiLtJ_P0094767 Ctnnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094768.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132876296 132904272 + MGP_NODShiLtJ_P0094768 Ctnnb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094769.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132876307 132900214 + Ctnnb1 protein_coding retained_intron MGP_NODShiLtJ_T0094770.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132876399 132904272 + MGP_NODShiLtJ_P0094770 Ctnnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094771.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132876444 132895449 + MGP_NODShiLtJ_P0094771 Ctnnb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094772.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132876639 132895032 + MGP_NODShiLtJ_P0094772 Ctnnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094773.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132893959 132903283 + MGP_NODShiLtJ_P0094773 Ctnnb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094774.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132894827 132899166 + MGP_NODShiLtJ_P0094774 Ctnnb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094775.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132898891 132899608 + Ctnnb1 protein_coding processed_transcript MGP_NODShiLtJ_T0094776.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132899063 132901405 + Ctnnb1 protein_coding processed_transcript MGP_NODShiLtJ_T0094777.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132899223 132901300 + MGP_NODShiLtJ_P0094777 Ctnnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094778.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132899680 132902791 + MGP_NODShiLtJ_P0094778 Ctnnb1 protein_coding protein_coding MGP_NODShiLtJ_T0094779.1 MGP_NODShiLtJ_G0035238.1 mouse_genomes_project 9 132900632 132901590 + Ctnnb1 protein_coding retained_intron MGP_NODShiLtJ_T0005390.1 MGP_NODShiLtJ_G0004559.1 mouse_genomes_project 9 59620278 59621277 - Gm17226 antisense antisense MGP_NODShiLtJ_T0005391.1 MGP_NODShiLtJ_G0004559.1 mouse_genomes_project 9 59620289 59621618 - Gm17226 antisense antisense MGP_NODShiLtJ_T0090859.1 MGP_NODShiLtJ_G0034187.1 mouse_genomes_project 9 18473289 18474228 + MGP_NODShiLtJ_P0090859 Olfr832 protein_coding protein_coding MGP_NODShiLtJ_T0011637.1 MGP_NODShiLtJ_G0009770.1 mouse_genomes_project 9 120942007 120942135 - Gm27855 misc_RNA misc_RNA MGP_NODShiLtJ_T0002302.1 MGP_NODShiLtJ_G0002212.1 mouse_genomes_project 9 33936602 33939241 - TEC TEC MGP_NODShiLtJ_T0092814.1 MGP_NODShiLtJ_G0034843.1 mouse_genomes_project 9 82182035 82320226 + MGP_NODShiLtJ_P0092814 Hmgcll1 protein_coding protein_coding MGP_NODShiLtJ_T0092815.1 MGP_NODShiLtJ_G0034843.1 mouse_genomes_project 9 82182194 82250432 + Hmgcll1 protein_coding retained_intron MGP_NODShiLtJ_T0092816.1 MGP_NODShiLtJ_G0034843.1 mouse_genomes_project 9 82182195 82246196 + Hmgcll1 protein_coding retained_intron MGP_NODShiLtJ_T0092817.1 MGP_NODShiLtJ_G0034843.1 mouse_genomes_project 9 82182235 82317208 + MGP_NODShiLtJ_P0092817 Hmgcll1 protein_coding protein_coding MGP_NODShiLtJ_T0092818.1 MGP_NODShiLtJ_G0034843.1 mouse_genomes_project 9 82182255 82316975 + MGP_NODShiLtJ_P0092818 Hmgcll1 protein_coding protein_coding MGP_NODShiLtJ_T0090719.1 MGP_NODShiLtJ_G0034136.1 mouse_genomes_project 9 6208124 6219306 + MGP_NODShiLtJ_P0090719 1700128F08Rik protein_coding protein_coding MGP_NODShiLtJ_T0009167.1 MGP_NODShiLtJ_G0007360.1 mouse_genomes_project 9 61862729 61871030 - Gm26631 lincRNA lincRNA MGP_NODShiLtJ_T0090858.1 MGP_NODShiLtJ_G0034186.1 mouse_genomes_project 9 18461106 18473732 - MGP_NODShiLtJ_P0090858 protein_coding protein_coding MGP_NODShiLtJ_T0093326.1 MGP_NODShiLtJ_G0034962.1 mouse_genomes_project 9 108581266 108582770 + MGP_NODShiLtJ_P0093326 7420426K07Rik protein_coding protein_coding MGP_NODShiLtJ_T0091688.1 MGP_NODShiLtJ_G0034534.1 mouse_genomes_project 9 48553046 48568075 - MGP_NODShiLtJ_P0091688 Il10ra protein_coding protein_coding MGP_NODShiLtJ_T0091689.1 MGP_NODShiLtJ_G0034534.1 mouse_genomes_project 9 48553049 48568075 - MGP_NODShiLtJ_P0091689 Il10ra protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091690.1 MGP_NODShiLtJ_G0034534.1 mouse_genomes_project 9 48553736 48568072 - MGP_NODShiLtJ_P0091690 Il10ra protein_coding protein_coding MGP_NODShiLtJ_T0100925.1 MGP_NODShiLtJ_G0039319.1 mouse_genomes_project 9 120955690 120955816 - Gm23377 snoRNA snoRNA MGP_NODShiLtJ_T0092203.1 MGP_NODShiLtJ_G0034697.1 mouse_genomes_project 9 63916079 64027495 - MGP_NODShiLtJ_P0092203 Arih1 protein_coding protein_coding MGP_NODShiLtJ_T0092204.1 MGP_NODShiLtJ_G0034697.1 mouse_genomes_project 9 63920934 64027499 - MGP_NODShiLtJ_P0092204 Arih1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092205.1 MGP_NODShiLtJ_G0034697.1 mouse_genomes_project 9 63921115 64027228 - MGP_NODShiLtJ_P0092205 Arih1 protein_coding protein_coding MGP_NODShiLtJ_T0092206.1 MGP_NODShiLtJ_G0034697.1 mouse_genomes_project 9 63922633 63934371 - MGP_NODShiLtJ_P0092206 Arih1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092207.1 MGP_NODShiLtJ_G0034697.1 mouse_genomes_project 9 63922718 63934624 - Arih1 protein_coding retained_intron MGP_NODShiLtJ_T0092208.1 MGP_NODShiLtJ_G0034697.1 mouse_genomes_project 9 63958806 64026937 - Arih1 protein_coding retained_intron MGP_NODShiLtJ_T0092209.1 MGP_NODShiLtJ_G0034697.1 mouse_genomes_project 9 63974318 64026964 - Arih1 protein_coding retained_intron MGP_NODShiLtJ_T0090943.1 MGP_NODShiLtJ_G0034228.1 mouse_genomes_project 9 21106015 21111866 - MGP_NODShiLtJ_P0090943 Angptl6 protein_coding protein_coding MGP_NODShiLtJ_T0101201.1 MGP_NODShiLtJ_G0039507.1 mouse_genomes_project 9 13795441 13795789 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0090675.1 MGP_NODShiLtJ_G0034119.1 mouse_genomes_project 9 5012401 5038136 + MGP_NODShiLtJ_P0090675 Dcun1d5 protein_coding protein_coding MGP_NODShiLtJ_T0093581.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115642093 115704986 - MGP_NODShiLtJ_P0093581 Atp2c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093582.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115642093 115767146 - MGP_NODShiLtJ_P0093582 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093583.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115642100 115738810 - MGP_NODShiLtJ_P0093583 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093584.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115647881 115739487 - MGP_NODShiLtJ_P0093584 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093585.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115648261 115739526 - MGP_NODShiLtJ_P0093585 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093586.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115648262 115767256 - MGP_NODShiLtJ_P0093586 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093587.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115651922 115680631 - Atp2c1 protein_coding processed_transcript MGP_NODShiLtJ_T0093588.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115653709 115656768 - Atp2c1 protein_coding retained_intron MGP_NODShiLtJ_T0093589.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115658584 115676783 - Atp2c1 protein_coding retained_intron MGP_NODShiLtJ_T0093590.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115664843 115739470 - MGP_NODShiLtJ_P0093590 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093591.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115679233 115686132 - Atp2c1 protein_coding retained_intron MGP_NODShiLtJ_T0093592.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115688849 115738852 - Atp2c1 protein_coding processed_transcript MGP_NODShiLtJ_T0093593.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115696161 115714800 - MGP_NODShiLtJ_P0093593 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093594.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115697131 115739440 - MGP_NODShiLtJ_P0093594 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093595.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115697795 115739888 - Atp2c1 protein_coding retained_intron MGP_NODShiLtJ_T0093596.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115697851 115739003 - MGP_NODShiLtJ_P0093596 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093597.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115703601 115773329 - Atp2c1 protein_coding processed_transcript MGP_NODShiLtJ_T0093598.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115703601 115739876 - MGP_NODShiLtJ_P0093598 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093599.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115704972 115739498 - MGP_NODShiLtJ_P0093599 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093600.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115709089 115739057 - MGP_NODShiLtJ_P0093600 Atp2c1 protein_coding protein_coding MGP_NODShiLtJ_T0093601.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115713512 115739498 - Atp2c1 protein_coding retained_intron MGP_NODShiLtJ_T0093602.1 MGP_NODShiLtJ_G0035015.1 mouse_genomes_project 9 115766000 115767413 - Atp2c1 protein_coding retained_intron MGP_NODShiLtJ_T0015913.1 MGP_NODShiLtJ_G0014021.1 mouse_genomes_project 9 32574232 32574610 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090724.1 MGP_NODShiLtJ_G0034139.1 mouse_genomes_project 9 6987835 6991818 + MGP_NODShiLtJ_P0090724 Gm16485 protein_coding protein_coding MGP_NODShiLtJ_T0091632.1 MGP_NODShiLtJ_G0034516.1 mouse_genomes_project 9 48002434 48036451 - MGP_NODShiLtJ_P0091632 Arcn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091633.1 MGP_NODShiLtJ_G0034516.1 mouse_genomes_project 9 48022147 48036577 - Arcn1 protein_coding retained_intron MGP_NODShiLtJ_T0002400.1 MGP_NODShiLtJ_G0002309.1 mouse_genomes_project 9 114396747 114398260 + TEC TEC MGP_NODShiLtJ_T0002359.1 MGP_NODShiLtJ_G0002268.1 mouse_genomes_project 9 97529250 97533119 - TEC TEC MGP_NODShiLtJ_T0002358.1 MGP_NODShiLtJ_G0002267.1 mouse_genomes_project 9 97513649 97514953 + TEC TEC MGP_NODShiLtJ_T0090790.1 MGP_NODShiLtJ_G0034159.1 mouse_genomes_project 9 13813840 13824420 + MGP_NODShiLtJ_P0090790 Gpr83 protein_coding protein_coding MGP_NODShiLtJ_T0090791.1 MGP_NODShiLtJ_G0034159.1 mouse_genomes_project 9 13813884 13823941 + MGP_NODShiLtJ_P0090791 Gpr83 protein_coding protein_coding MGP_NODShiLtJ_T0090792.1 MGP_NODShiLtJ_G0034159.1 mouse_genomes_project 9 13818970 13824420 + Gpr83 protein_coding retained_intron MGP_NODShiLtJ_T0002363.1 MGP_NODShiLtJ_G0002272.1 mouse_genomes_project 9 99975833 99977657 - TEC TEC MGP_NODShiLtJ_T0018378.1 MGP_NODShiLtJ_G0015609.1 mouse_genomes_project 9 78129269 78137829 + Gm27230 processed_transcript lincRNA MGP_NODShiLtJ_T0018379.1 MGP_NODShiLtJ_G0015609.1 mouse_genomes_project 9 78129275 78135968 + Gm27230 processed_transcript lincRNA MGP_NODShiLtJ_T0018380.1 MGP_NODShiLtJ_G0015609.1 mouse_genomes_project 9 78136737 78137411 + Gm27230 processed_transcript retained_intron MGP_NODShiLtJ_T0090738.1 MGP_NODShiLtJ_G0034145.1 mouse_genomes_project 9 12278454 12279842 + MGP_NODShiLtJ_P0090738 Phxr4 protein_coding protein_coding MGP_NODShiLtJ_T0016028.1 MGP_NODShiLtJ_G0014136.1 mouse_genomes_project 9 111309320 111309573 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010959.1 MGP_NODShiLtJ_G0009092.1 mouse_genomes_project 9 55919989 55920106 + Mir6244 miRNA miRNA MGP_NODShiLtJ_T0094857.1 MGP_NODShiLtJ_G0035263.1 mouse_genomes_project 9 134902511 134915763 - MGP_NODShiLtJ_P0094857 Zfp445 protein_coding protein_coding MGP_NODShiLtJ_T0090951.1 MGP_NODShiLtJ_G0034231.1 mouse_genomes_project 9 21138535 21186436 - MGP_NODShiLtJ_P0090951 Dnmt1 protein_coding protein_coding MGP_NODShiLtJ_T0092090.1 MGP_NODShiLtJ_G0034659.1 mouse_genomes_project 9 61412853 61416112 - MGP_NODShiLtJ_P0092090 Commd4 protein_coding protein_coding MGP_NODShiLtJ_T0100874.1 MGP_NODShiLtJ_G0039268.1 mouse_genomes_project 9 26383596 26383724 - Gm25346 snoRNA snoRNA MGP_NODShiLtJ_T0099647.1 MGP_NODShiLtJ_G0038041.1 mouse_genomes_project 9 130176858 130176939 - Gm22479 snRNA snRNA MGP_NODShiLtJ_T0094506.1 MGP_NODShiLtJ_G0035164.1 mouse_genomes_project 9 121895075 121902131 - MGP_NODShiLtJ_P0094506 Rtp3 protein_coding protein_coding MGP_NODShiLtJ_T0094507.1 MGP_NODShiLtJ_G0035164.1 mouse_genomes_project 9 121897184 121903001 - MGP_NODShiLtJ_P0094507 Rtp3 protein_coding protein_coding MGP_NODShiLtJ_T0002386.1 MGP_NODShiLtJ_G0002295.1 mouse_genomes_project 9 111145122 111146474 - TEC TEC MGP_NODShiLtJ_T0092959.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90261437 90400604 - MGP_NODShiLtJ_P0092959 protein_coding protein_coding MGP_NODShiLtJ_T0092960.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90265540 90305532 - protein_coding retained_intron MGP_NODShiLtJ_T0092961.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90267665 90287861 - MGP_NODShiLtJ_P0092961 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092962.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90287476 90400496 - protein_coding retained_intron MGP_NODShiLtJ_T0092963.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90301162 90305252 - protein_coding retained_intron MGP_NODShiLtJ_T0092964.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90306312 90310264 - protein_coding retained_intron MGP_NODShiLtJ_T0092965.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90309819 90351368 - MGP_NODShiLtJ_P0092965 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092966.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90312561 90319678 - protein_coding retained_intron MGP_NODShiLtJ_T0092967.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90324826 90400514 - protein_coding retained_intron MGP_NODShiLtJ_T0092968.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90325436 90345735 - MGP_NODShiLtJ_P0092968 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092969.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90329167 90330954 - protein_coding retained_intron MGP_NODShiLtJ_T0092970.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90343125 90346767 - protein_coding retained_intron MGP_NODShiLtJ_T0092971.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90345773 90399356 - MGP_NODShiLtJ_P0092971 protein_coding protein_coding MGP_NODShiLtJ_T0092972.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90348902 90351825 - protein_coding retained_intron MGP_NODShiLtJ_T0092973.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90363979 90400504 - protein_coding retained_intron MGP_NODShiLtJ_T0092974.1 MGP_NODShiLtJ_G0034881.1 mouse_genomes_project 9 90380440 90400507 - protein_coding retained_intron MGP_NODShiLtJ_T0091719.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49277406 49294673 - MGP_NODShiLtJ_P0091719 Sidt2 protein_coding protein_coding MGP_NODShiLtJ_T0091720.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49277424 49294403 - MGP_NODShiLtJ_P0091720 Sidt2 protein_coding protein_coding MGP_NODShiLtJ_T0091721.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49278854 49280846 - MGP_NODShiLtJ_P0091721 Sidt2 protein_coding protein_coding MGP_NODShiLtJ_T0091722.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49281783 49284069 - Sidt2 protein_coding retained_intron MGP_NODShiLtJ_T0091723.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49282211 49284471 - Sidt2 protein_coding retained_intron MGP_NODShiLtJ_T0091724.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49283033 49286225 - MGP_NODShiLtJ_P0091724 Sidt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091725.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49283811 49287229 - Sidt2 protein_coding retained_intron MGP_NODShiLtJ_T0091726.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49284640 49287693 - MGP_NODShiLtJ_P0091726 Sidt2 protein_coding protein_coding MGP_NODShiLtJ_T0091727.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49284728 49294607 - MGP_NODShiLtJ_P0091727 Sidt2 protein_coding protein_coding MGP_NODShiLtJ_T0091728.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49284790 49291257 - MGP_NODShiLtJ_P0091728 Sidt2 protein_coding protein_coding MGP_NODShiLtJ_T0091729.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49285106 49291198 - MGP_NODShiLtJ_P0091729 Sidt2 protein_coding protein_coding MGP_NODShiLtJ_T0091730.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49285143 49291430 - MGP_NODShiLtJ_P0091730 Sidt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091731.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49285178 49287745 - MGP_NODShiLtJ_P0091731 Sidt2 protein_coding protein_coding MGP_NODShiLtJ_T0091732.1 MGP_NODShiLtJ_G0034544.1 mouse_genomes_project 9 49291866 49294660 - Sidt2 protein_coding retained_intron MGP_NODShiLtJ_T0093517.1 MGP_NODShiLtJ_G0035003.1 mouse_genomes_project 9 114159388 114203618 + MGP_NODShiLtJ_P0093517 Gm28305 protein_coding protein_coding MGP_NODShiLtJ_T0091467.1 MGP_NODShiLtJ_G0034464.1 mouse_genomes_project 9 43122724 43143609 + MGP_NODShiLtJ_P0091467 Scn3b protein_coding protein_coding MGP_NODShiLtJ_T0091468.1 MGP_NODShiLtJ_G0034464.1 mouse_genomes_project 9 43122851 43133096 + Scn3b protein_coding processed_transcript MGP_NODShiLtJ_T0091469.1 MGP_NODShiLtJ_G0034464.1 mouse_genomes_project 9 43122862 43131753 + Scn3b protein_coding retained_intron MGP_NODShiLtJ_T0091470.1 MGP_NODShiLtJ_G0034464.1 mouse_genomes_project 9 43123011 43130999 + Scn3b protein_coding retained_intron MGP_NODShiLtJ_T0091471.1 MGP_NODShiLtJ_G0034464.1 mouse_genomes_project 9 43123269 43143579 + MGP_NODShiLtJ_P0091471 Scn3b protein_coding protein_coding MGP_NODShiLtJ_T0090974.1 MGP_NODShiLtJ_G0034244.1 mouse_genomes_project 9 21508754 21516239 - MGP_NODShiLtJ_P0090974 S1pr5 protein_coding protein_coding MGP_NODShiLtJ_T0009166.1 MGP_NODShiLtJ_G0007359.1 mouse_genomes_project 9 61433846 61445924 + 1700041C23Rik lincRNA lincRNA MGP_NODShiLtJ_T0093792.1 MGP_NODShiLtJ_G0035053.1 mouse_genomes_project 9 117992148 117995007 - MGP_NODShiLtJ_P0093792 Cyb561d2 protein_coding protein_coding MGP_NODShiLtJ_T0093793.1 MGP_NODShiLtJ_G0035053.1 mouse_genomes_project 9 117992716 117995335 - MGP_NODShiLtJ_P0093793 Cyb561d2 protein_coding protein_coding MGP_NODShiLtJ_T0093794.1 MGP_NODShiLtJ_G0035053.1 mouse_genomes_project 9 117992722 117994666 - MGP_NODShiLtJ_P0093794 Cyb561d2 protein_coding protein_coding MGP_NODShiLtJ_T0093795.1 MGP_NODShiLtJ_G0035053.1 mouse_genomes_project 9 117993018 117995266 - Cyb561d2 protein_coding processed_transcript MGP_NODShiLtJ_T0093796.1 MGP_NODShiLtJ_G0035053.1 mouse_genomes_project 9 117993183 117995269 - MGP_NODShiLtJ_P0093796 Cyb561d2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100914.1 MGP_NODShiLtJ_G0039308.1 mouse_genomes_project 9 109500221 109500348 - Gm23949 snoRNA snoRNA MGP_NODShiLtJ_T0091183.1 MGP_NODShiLtJ_G0034320.1 mouse_genomes_project 9 33182500 33259666 - MGP_NODShiLtJ_P0091183 Barx2 protein_coding protein_coding MGP_NODShiLtJ_T0002410.1 MGP_NODShiLtJ_G0002319.1 mouse_genomes_project 9 118693203 118694021 - TEC TEC MGP_NODShiLtJ_T0094317.1 MGP_NODShiLtJ_G0035130.1 mouse_genomes_project 9 119909872 120409166 - MGP_NODShiLtJ_P0094317 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092984.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90846616 90887332 - MGP_NODShiLtJ_P0092984 Lca5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092985.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90847703 90904526 - MGP_NODShiLtJ_P0092985 Lca5 protein_coding protein_coding MGP_NODShiLtJ_T0092986.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90849758 90904426 - MGP_NODShiLtJ_P0092986 Lca5 protein_coding protein_coding MGP_NODShiLtJ_T0092987.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90859758 90860993 - Lca5 protein_coding retained_intron MGP_NODShiLtJ_T0092988.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90882614 90904492 - Lca5 protein_coding retained_intron MGP_NODShiLtJ_T0092989.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90883590 90897809 - MGP_NODShiLtJ_P0092989 Lca5 protein_coding protein_coding MGP_NODShiLtJ_T0092990.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90883795 90887340 - Lca5 protein_coding retained_intron MGP_NODShiLtJ_T0092991.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90887119 90904515 - MGP_NODShiLtJ_P0092991 Lca5 protein_coding protein_coding MGP_NODShiLtJ_T0092992.1 MGP_NODShiLtJ_G0034883.1 mouse_genomes_project 9 90887210 90904461 - Lca5 protein_coding processed_transcript MGP_NODShiLtJ_T0091898.1 MGP_NODShiLtJ_G0034595.1 mouse_genomes_project 9 54828196 54831893 + MGP_NODShiLtJ_P0091898 Btg4 protein_coding protein_coding MGP_NODShiLtJ_T0092603.1 MGP_NODShiLtJ_G0034796.1 mouse_genomes_project 9 75951164 75967377 - MGP_NODShiLtJ_P0092603 Ccnb2 protein_coding protein_coding MGP_NODShiLtJ_T0010977.1 MGP_NODShiLtJ_G0009110.1 mouse_genomes_project 9 101195552 101195656 - Mir6386 miRNA miRNA MGP_NODShiLtJ_T0009193.1 MGP_NODShiLtJ_G0007381.1 mouse_genomes_project 9 81479325 81485403 + 4933433G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0009194.1 MGP_NODShiLtJ_G0007381.1 mouse_genomes_project 9 81479325 81487580 + 4933433G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0091634.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48041802 48073111 + MGP_NODShiLtJ_P0091634 Ift46 protein_coding protein_coding MGP_NODShiLtJ_T0091635.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48041827 48058715 + MGP_NODShiLtJ_P0091635 Ift46 protein_coding protein_coding MGP_NODShiLtJ_T0091636.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48041918 48062891 + Ift46 protein_coding processed_transcript MGP_NODShiLtJ_T0091637.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48041921 48043283 + Ift46 protein_coding processed_transcript MGP_NODShiLtJ_T0091638.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48041967 48060628 + MGP_NODShiLtJ_P0091638 Ift46 protein_coding protein_coding MGP_NODShiLtJ_T0091639.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48042130 48058707 + MGP_NODShiLtJ_P0091639 Ift46 protein_coding protein_coding MGP_NODShiLtJ_T0091640.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48042567 48058776 + MGP_NODShiLtJ_P0091640 Ift46 protein_coding protein_coding MGP_NODShiLtJ_T0091641.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48045342 48071292 + MGP_NODShiLtJ_P0091641 Ift46 protein_coding protein_coding MGP_NODShiLtJ_T0091642.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48046723 48058785 + Ift46 protein_coding retained_intron MGP_NODShiLtJ_T0091643.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48060881 48064131 + Ift46 protein_coding processed_transcript MGP_NODShiLtJ_T0091644.1 MGP_NODShiLtJ_G0034517.1 mouse_genomes_project 9 48069840 48071133 + Ift46 protein_coding retained_intron MGP_NODShiLtJ_T0094844.1 MGP_NODShiLtJ_G0035259.1 mouse_genomes_project 9 134365616 134396147 + MGP_NODShiLtJ_P0094844 Abhd5 protein_coding protein_coding MGP_NODShiLtJ_T0094845.1 MGP_NODShiLtJ_G0035259.1 mouse_genomes_project 9 134365738 134396147 + MGP_NODShiLtJ_P0094845 Abhd5 protein_coding protein_coding MGP_NODShiLtJ_T0094846.1 MGP_NODShiLtJ_G0035259.1 mouse_genomes_project 9 134365738 134394448 + MGP_NODShiLtJ_P0094846 Abhd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094847.1 MGP_NODShiLtJ_G0035259.1 mouse_genomes_project 9 134365740 134373289 + Abhd5 protein_coding processed_transcript MGP_NODShiLtJ_T0094848.1 MGP_NODShiLtJ_G0035259.1 mouse_genomes_project 9 134365740 134392555 + MGP_NODShiLtJ_P0094848 Abhd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094849.1 MGP_NODShiLtJ_G0035259.1 mouse_genomes_project 9 134378278 134382887 + MGP_NODShiLtJ_P0094849 Abhd5 protein_coding protein_coding MGP_NODShiLtJ_T0097850.1 MGP_NODShiLtJ_G0036262.1 mouse_genomes_project 9 40791568 40799970 + pseudogene pseudogene MGP_NODShiLtJ_T0093078.1 MGP_NODShiLtJ_G0034901.1 mouse_genomes_project 9 95235716 95305331 - MGP_NODShiLtJ_P0093078 Cep162 protein_coding protein_coding MGP_NODShiLtJ_T0093079.1 MGP_NODShiLtJ_G0034901.1 mouse_genomes_project 9 95250144 95258210 - Cep162 protein_coding processed_transcript MGP_NODShiLtJ_T0093080.1 MGP_NODShiLtJ_G0034901.1 mouse_genomes_project 9 95275166 95278162 - Cep162 protein_coding retained_intron MGP_NODShiLtJ_T0093081.1 MGP_NODShiLtJ_G0034901.1 mouse_genomes_project 9 95275924 95305083 - Cep162 protein_coding retained_intron MGP_NODShiLtJ_T0011639.1 MGP_NODShiLtJ_G0009772.1 mouse_genomes_project 9 124524376 124524673 + Gm22492 misc_RNA misc_RNA MGP_NODShiLtJ_T0005357.1 MGP_NODShiLtJ_G0004536.1 mouse_genomes_project 9 20824974 20835700 + Fbxl12os antisense antisense MGP_NODShiLtJ_T0005358.1 MGP_NODShiLtJ_G0004536.1 mouse_genomes_project 9 20825161 20832473 + Fbxl12os antisense antisense MGP_NODShiLtJ_T0005359.1 MGP_NODShiLtJ_G0004536.1 mouse_genomes_project 9 20825309 20832478 + Fbxl12os antisense antisense MGP_NODShiLtJ_T0005360.1 MGP_NODShiLtJ_G0004536.1 mouse_genomes_project 9 20832209 20833375 + Fbxl12os antisense antisense MGP_NODShiLtJ_T0091415.1 MGP_NODShiLtJ_G0034419.1 mouse_genomes_project 9 41209183 41210061 + MGP_NODShiLtJ_P0091415 Olfr26 protein_coding protein_coding MGP_NODShiLtJ_T0094791.1 MGP_NODShiLtJ_G0035241.1 mouse_genomes_project 9 133468060 133473913 - MGP_NODShiLtJ_P0094791 Cck protein_coding protein_coding MGP_NODShiLtJ_T0094887.1 MGP_NODShiLtJ_G0035274.1 mouse_genomes_project 9 135336567 135338299 - MGP_NODShiLtJ_P0094887 Tmem158 protein_coding protein_coding MGP_NODShiLtJ_T0092409.1 MGP_NODShiLtJ_G0034750.1 mouse_genomes_project 9 70356745 70395318 + MGP_NODShiLtJ_P0092409 Clpx protein_coding protein_coding MGP_NODShiLtJ_T0092410.1 MGP_NODShiLtJ_G0034750.1 mouse_genomes_project 9 70356780 70395319 + MGP_NODShiLtJ_P0092410 Clpx protein_coding protein_coding MGP_NODShiLtJ_T0092411.1 MGP_NODShiLtJ_G0034750.1 mouse_genomes_project 9 70356817 70372871 + Clpx protein_coding retained_intron MGP_NODShiLtJ_T0092412.1 MGP_NODShiLtJ_G0034750.1 mouse_genomes_project 9 70373774 70383250 + MGP_NODShiLtJ_P0092412 Clpx protein_coding protein_coding MGP_NODShiLtJ_T0091608.1 MGP_NODShiLtJ_G0034513.1 mouse_genomes_project 9 47844173 47885818 + MGP_NODShiLtJ_P0091608 Ddx6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091609.1 MGP_NODShiLtJ_G0034513.1 mouse_genomes_project 9 47844223 47887477 + MGP_NODShiLtJ_P0091609 Ddx6 protein_coding protein_coding MGP_NODShiLtJ_T0090853.1 MGP_NODShiLtJ_G0034181.1 mouse_genomes_project 9 17937100 17954272 - MGP_NODShiLtJ_P0090853 protein_coding protein_coding MGP_NODShiLtJ_T0091379.1 MGP_NODShiLtJ_G0034389.1 mouse_genomes_project 9 40318759 40319710 - MGP_NODShiLtJ_P0091379 Olfr891 protein_coding protein_coding MGP_NODShiLtJ_T0090692.1 MGP_NODShiLtJ_G0034129.1 mouse_genomes_project 9 5593061 5600557 + MGP_NODShiLtJ_P0090692 Mmp7 protein_coding protein_coding MGP_NODShiLtJ_T0098112.1 MGP_NODShiLtJ_G0036524.1 mouse_genomes_project 9 105985848 105985930 - Gm27289 rRNA rRNA MGP_NODShiLtJ_T0016043.1 MGP_NODShiLtJ_G0014151.1 mouse_genomes_project 9 119116819 119124989 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091383.1 MGP_NODShiLtJ_G0034393.1 mouse_genomes_project 9 40446706 40447657 + MGP_NODShiLtJ_P0091383 Olfr895 protein_coding protein_coding MGP_NODShiLtJ_T0091994.1 MGP_NODShiLtJ_G0034634.1 mouse_genomes_project 9 59045060 59060402 - MGP_NODShiLtJ_P0091994 Chrna3 protein_coding protein_coding MGP_NODShiLtJ_T0098468.1 MGP_NODShiLtJ_G0036867.1 mouse_genomes_project 9 110396208 110396674 - Gm28586 sense_intronic sense_intronic MGP_NODShiLtJ_T0099609.1 MGP_NODShiLtJ_G0038003.1 mouse_genomes_project 9 70242941 70243057 - Gm25313 snRNA snRNA MGP_NODShiLtJ_T0093114.1 MGP_NODShiLtJ_G0034913.1 mouse_genomes_project 9 97456355 97472991 + MGP_NODShiLtJ_P0093114 protein_coding protein_coding MGP_NODShiLtJ_T0093427.1 MGP_NODShiLtJ_G0034985.1 mouse_genomes_project 9 111949077 111953817 + MGP_NODShiLtJ_P0093427 9630041A04Rik protein_coding protein_coding MGP_NODShiLtJ_T0090976.1 MGP_NODShiLtJ_G0034246.1 mouse_genomes_project 9 21542782 21544308 - Kri1 protein_coding retained_intron MGP_NODShiLtJ_T0090977.1 MGP_NODShiLtJ_G0034246.1 mouse_genomes_project 9 21542835 21558482 - MGP_NODShiLtJ_P0090977 Kri1 protein_coding protein_coding MGP_NODShiLtJ_T0090978.1 MGP_NODShiLtJ_G0034246.1 mouse_genomes_project 9 21547850 21558498 - Kri1 protein_coding retained_intron MGP_NODShiLtJ_T0090979.1 MGP_NODShiLtJ_G0034246.1 mouse_genomes_project 9 21550946 21558485 - Kri1 protein_coding retained_intron MGP_NODShiLtJ_T0090980.1 MGP_NODShiLtJ_G0034246.1 mouse_genomes_project 9 21551900 21558498 - Kri1 protein_coding retained_intron MGP_NODShiLtJ_T0090981.1 MGP_NODShiLtJ_G0034246.1 mouse_genomes_project 9 21558053 21558485 - Kri1 protein_coding retained_intron MGP_NODShiLtJ_T0099610.1 MGP_NODShiLtJ_G0038004.1 mouse_genomes_project 9 70248831 70248947 - Rnu5g snRNA snRNA MGP_NODShiLtJ_T0092794.1 MGP_NODShiLtJ_G0034833.1 mouse_genomes_project 9 81374758 81409994 + MGP_NODShiLtJ_P0092794 Gnb5 protein_coding protein_coding MGP_NODShiLtJ_T0090687.1 MGP_NODShiLtJ_G0034125.1 mouse_genomes_project 9 5371789 5379499 + MGP_NODShiLtJ_P0090687 Mmp10 protein_coding protein_coding MGP_NODShiLtJ_T0005412.1 MGP_NODShiLtJ_G0004573.1 mouse_genomes_project 9 78088341 78143998 - BC065403 antisense antisense MGP_NODShiLtJ_T0005413.1 MGP_NODShiLtJ_G0004573.1 mouse_genomes_project 9 78142697 78143920 - BC065403 antisense antisense MGP_NODShiLtJ_T0018425.1 MGP_NODShiLtJ_G0015627.1 mouse_genomes_project 9 119412999 119414160 - Gm35025 processed_transcript lincRNA MGP_NODShiLtJ_T0018426.1 MGP_NODShiLtJ_G0015627.1 mouse_genomes_project 9 119413131 119413881 - Gm35025 processed_transcript lincRNA MGP_NODShiLtJ_T0018427.1 MGP_NODShiLtJ_G0015627.1 mouse_genomes_project 9 119413228 119413923 - Gm35025 processed_transcript TEC MGP_NODShiLtJ_T0091904.1 MGP_NODShiLtJ_G0034600.1 mouse_genomes_project 9 55535800 55562343 + Arhgap20 protein_coding retained_intron MGP_NODShiLtJ_T0091905.1 MGP_NODShiLtJ_G0034600.1 mouse_genomes_project 9 55535808 55615702 + Arhgap20 protein_coding retained_intron MGP_NODShiLtJ_T0091906.1 MGP_NODShiLtJ_G0034600.1 mouse_genomes_project 9 55535815 55643823 + MGP_NODShiLtJ_P0091906 Arhgap20 protein_coding protein_coding MGP_NODShiLtJ_T0091907.1 MGP_NODShiLtJ_G0034600.1 mouse_genomes_project 9 55536039 55643832 + MGP_NODShiLtJ_P0091907 Arhgap20 protein_coding protein_coding MGP_NODShiLtJ_T0091908.1 MGP_NODShiLtJ_G0034600.1 mouse_genomes_project 9 55605700 55619416 + Arhgap20 protein_coding processed_transcript MGP_NODShiLtJ_T0091909.1 MGP_NODShiLtJ_G0034600.1 mouse_genomes_project 9 55621790 55638616 + Arhgap20 protein_coding processed_transcript MGP_NODShiLtJ_T0092855.1 MGP_NODShiLtJ_G0034851.1 mouse_genomes_project 9 84281333 84332627 + MGP_NODShiLtJ_P0092855 Gclc protein_coding protein_coding MGP_NODShiLtJ_T0000340.1 MGP_NODShiLtJ_G0000278.1 mouse_genomes_project 9 135177137 135177204 + mt-Tc Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0009126.1 MGP_NODShiLtJ_G0007325.1 mouse_genomes_project 9 20644822 20779351 + lincRNA lincRNA MGP_NODShiLtJ_T0010971.1 MGP_NODShiLtJ_G0009104.1 mouse_genomes_project 9 74924207 74924295 + Mir3109 miRNA miRNA MGP_NODShiLtJ_T0090955.1 MGP_NODShiLtJ_G0034235.1 mouse_genomes_project 9 21271806 21272965 + MGP_NODShiLtJ_P0090955 Icam4 protein_coding protein_coding MGP_NODShiLtJ_T0002413.1 MGP_NODShiLtJ_G0002322.1 mouse_genomes_project 9 119097534 119098680 + TEC TEC MGP_NODShiLtJ_T0092114.1 MGP_NODShiLtJ_G0034676.1 mouse_genomes_project 9 62102488 62118094 - MGP_NODShiLtJ_P0092114 Clk3 protein_coding protein_coding MGP_NODShiLtJ_T0094290.1 MGP_NODShiLtJ_G0035121.1 mouse_genomes_project 9 119608221 119624361 - MGP_NODShiLtJ_P0094290 Gm42641 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094292.1 MGP_NODShiLtJ_G0035121.1 mouse_genomes_project 9 119608224 119624410 - Gm42641 protein_coding retained_intron MGP_NODShiLtJ_T0094294.1 MGP_NODShiLtJ_G0035121.1 mouse_genomes_project 9 119608758 119610627 - MGP_NODShiLtJ_P0094294 Gm42641 protein_coding protein_coding MGP_NODShiLtJ_T0015980.1 MGP_NODShiLtJ_G0014088.1 mouse_genomes_project 9 92900238 92900679 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098470.1 MGP_NODShiLtJ_G0036869.1 mouse_genomes_project 9 118919649 118920773 + Gm37963 sense_intronic sense_intronic MGP_NODShiLtJ_T0093338.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 108962224 108984332 + MGP_NODShiLtJ_P0093338 Cep70 protein_coding protein_coding MGP_NODShiLtJ_T0093339.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 108962299 109014924 + MGP_NODShiLtJ_P0093339 Cep70 protein_coding protein_coding MGP_NODShiLtJ_T0093340.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 108962310 108973910 + Cep70 protein_coding retained_intron MGP_NODShiLtJ_T0093341.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 108962318 108985496 + MGP_NODShiLtJ_P0093341 Cep70 protein_coding protein_coding MGP_NODShiLtJ_T0093342.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 108962320 109012676 + MGP_NODShiLtJ_P0093342 Cep70 protein_coding protein_coding MGP_NODShiLtJ_T0093343.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 108962339 108983198 + MGP_NODShiLtJ_P0093343 Cep70 protein_coding protein_coding MGP_NODShiLtJ_T0093344.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 108962383 108992992 + MGP_NODShiLtJ_P0093344 Cep70 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093345.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 108965743 108983637 + Cep70 protein_coding retained_intron MGP_NODShiLtJ_T0093346.1 MGP_NODShiLtJ_G0034968.1 mouse_genomes_project 9 109006222 109011042 + Cep70 protein_coding retained_intron MGP_NODShiLtJ_T0018383.1 MGP_NODShiLtJ_G0015611.1 mouse_genomes_project 9 80874057 80879113 + Gm16551 processed_transcript lincRNA MGP_NODShiLtJ_T0018384.1 MGP_NODShiLtJ_G0015611.1 mouse_genomes_project 9 80874624 80886395 + Gm16551 processed_transcript lincRNA MGP_NODShiLtJ_T0018385.1 MGP_NODShiLtJ_G0015611.1 mouse_genomes_project 9 80874690 80875555 + Gm16551 processed_transcript retained_intron MGP_NODShiLtJ_T0018386.1 MGP_NODShiLtJ_G0015611.1 mouse_genomes_project 9 80874713 80879112 + Gm16551 processed_transcript lincRNA MGP_NODShiLtJ_T0018387.1 MGP_NODShiLtJ_G0015611.1 mouse_genomes_project 9 80875182 80877444 + Gm16551 processed_transcript retained_intron MGP_NODShiLtJ_T0002321.1 MGP_NODShiLtJ_G0002231.1 mouse_genomes_project 9 77702018 77705964 - TEC TEC MGP_NODShiLtJ_T0094337.1 MGP_NODShiLtJ_G0035135.1 mouse_genomes_project 9 120629419 120633124 - MGP_NODShiLtJ_P0094337 Camp protein_coding protein_coding MGP_NODShiLtJ_T0018335.1 MGP_NODShiLtJ_G0015595.1 mouse_genomes_project 9 5894811 5905978 + Gm20416 processed_transcript processed_transcript MGP_NODShiLtJ_T0091113.1 MGP_NODShiLtJ_G0034299.1 mouse_genomes_project 9 27701909 27751946 - MGP_NODShiLtJ_P0091113 Glb1l2 protein_coding protein_coding MGP_NODShiLtJ_T0091114.1 MGP_NODShiLtJ_G0034299.1 mouse_genomes_project 9 27701910 27751982 - MGP_NODShiLtJ_P0091114 Glb1l2 protein_coding protein_coding MGP_NODShiLtJ_T0091115.1 MGP_NODShiLtJ_G0034299.1 mouse_genomes_project 9 27702633 27751935 - MGP_NODShiLtJ_P0091115 Glb1l2 protein_coding protein_coding MGP_NODShiLtJ_T0091116.1 MGP_NODShiLtJ_G0034299.1 mouse_genomes_project 9 27704068 27748098 - MGP_NODShiLtJ_P0091116 Glb1l2 protein_coding protein_coding MGP_NODShiLtJ_T0091117.1 MGP_NODShiLtJ_G0034299.1 mouse_genomes_project 9 27706362 27707336 - Glb1l2 protein_coding retained_intron MGP_NODShiLtJ_T0091118.1 MGP_NODShiLtJ_G0034299.1 mouse_genomes_project 9 27712876 27737732 - Glb1l2 protein_coding retained_intron MGP_NODShiLtJ_T0091119.1 MGP_NODShiLtJ_G0034299.1 mouse_genomes_project 9 27719532 27751936 - MGP_NODShiLtJ_P0091119 Glb1l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015912.1 MGP_NODShiLtJ_G0014020.1 mouse_genomes_project 9 32384412 32385205 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005482.1 MGP_NODShiLtJ_G0004620.1 mouse_genomes_project 9 118471902 118475875 - 4921523L03Rik antisense antisense MGP_NODShiLtJ_T0092055.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61317355 61334773 + MGP_NODShiLtJ_P0092055 Sin3a protein_coding protein_coding MGP_NODShiLtJ_T0092056.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61320653 61376533 + MGP_NODShiLtJ_P0092056 Sin3a protein_coding protein_coding MGP_NODShiLtJ_T0092057.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61321691 61376531 + MGP_NODShiLtJ_P0092057 Sin3a protein_coding protein_coding MGP_NODShiLtJ_T0092058.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61321714 61376533 + MGP_NODShiLtJ_P0092058 Sin3a protein_coding protein_coding MGP_NODShiLtJ_T0092059.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61321943 61341605 + MGP_NODShiLtJ_P0092059 Sin3a protein_coding protein_coding MGP_NODShiLtJ_T0092060.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61326473 61376533 + MGP_NODShiLtJ_P0092060 Sin3a protein_coding protein_coding MGP_NODShiLtJ_T0092061.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61331857 61376533 + MGP_NODShiLtJ_P0092061 Sin3a protein_coding protein_coding MGP_NODShiLtJ_T0092062.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61341449 61344082 + Sin3a protein_coding retained_intron MGP_NODShiLtJ_T0092063.1 MGP_NODShiLtJ_G0034656.1 mouse_genomes_project 9 61360920 61373355 + Sin3a protein_coding retained_intron MGP_NODShiLtJ_T0091418.1 MGP_NODShiLtJ_G0034422.1 mouse_genomes_project 9 41356585 41357518 - MGP_NODShiLtJ_P0091418 Olfr934 protein_coding protein_coding MGP_NODShiLtJ_T0093177.1 MGP_NODShiLtJ_G0034927.1 mouse_genomes_project 9 101164853 101201256 + MGP_NODShiLtJ_P0093177 Plscr1 protein_coding protein_coding MGP_NODShiLtJ_T0100930.1 MGP_NODShiLtJ_G0039324.1 mouse_genomes_project 9 131976794 131976997 + Gm26448 snoRNA snoRNA MGP_NODShiLtJ_T0100857.1 MGP_NODShiLtJ_G0039251.1 mouse_genomes_project 9 2438011 2438146 + Gm24896 snoRNA snoRNA MGP_NODShiLtJ_T0091695.1 MGP_NODShiLtJ_G0034538.1 mouse_genomes_project 9 48737223 49068443 + MGP_NODShiLtJ_P0091695 Dscaml1 protein_coding protein_coding MGP_NODShiLtJ_T0092924.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 86989072 87019243 + Senp6 protein_coding retained_intron MGP_NODShiLtJ_T0092925.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 86989072 87076929 + MGP_NODShiLtJ_P0092925 Senp6 protein_coding protein_coding MGP_NODShiLtJ_T0092926.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 86989105 87043098 + MGP_NODShiLtJ_P0092926 Senp6 protein_coding protein_coding MGP_NODShiLtJ_T0092927.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 86989268 87076757 + MGP_NODShiLtJ_P0092927 Senp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092928.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 86989693 87075838 + MGP_NODShiLtJ_P0092928 Senp6 protein_coding protein_coding MGP_NODShiLtJ_T0092929.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 86989986 87011149 + Senp6 protein_coding processed_transcript MGP_NODShiLtJ_T0092930.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 87017034 87050734 + MGP_NODShiLtJ_P0092930 Senp6 protein_coding protein_coding MGP_NODShiLtJ_T0092931.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 87032322 87075688 + MGP_NODShiLtJ_P0092931 Senp6 protein_coding protein_coding MGP_NODShiLtJ_T0092932.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 87043366 87048091 + MGP_NODShiLtJ_P0092932 Senp6 protein_coding protein_coding MGP_NODShiLtJ_T0092933.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 87043383 87050806 + Senp6 protein_coding processed_transcript MGP_NODShiLtJ_T0092934.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 87052550 87067315 + MGP_NODShiLtJ_P0092934 Senp6 protein_coding protein_coding MGP_NODShiLtJ_T0092935.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 87067115 87076147 + Senp6 protein_coding retained_intron MGP_NODShiLtJ_T0092936.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 87069777 87075685 + Senp6 protein_coding retained_intron MGP_NODShiLtJ_T0092937.1 MGP_NODShiLtJ_G0034875.1 mouse_genomes_project 9 87073995 87075981 + Senp6 protein_coding retained_intron MGP_NODShiLtJ_T0002316.1 MGP_NODShiLtJ_G0002226.1 mouse_genomes_project 9 77549032 77552499 - TEC TEC MGP_NODShiLtJ_T0002409.1 MGP_NODShiLtJ_G0002318.1 mouse_genomes_project 9 118691662 118692392 - TEC TEC MGP_NODShiLtJ_T0091160.1 MGP_NODShiLtJ_G0034314.1 mouse_genomes_project 9 32319496 32359248 + MGP_NODShiLtJ_P0091160 Zbtb44 protein_coding protein_coding MGP_NODShiLtJ_T0091161.1 MGP_NODShiLtJ_G0034314.1 mouse_genomes_project 9 32343122 32358976 + MGP_NODShiLtJ_P0091161 Zbtb44 protein_coding protein_coding MGP_NODShiLtJ_T0093208.1 MGP_NODShiLtJ_G0034936.1 mouse_genomes_project 9 104909965 104918332 + MGP_NODShiLtJ_P0093208 Paqr9 protein_coding protein_coding MGP_NODShiLtJ_T0009140.1 MGP_NODShiLtJ_G0007339.1 mouse_genomes_project 9 35639347 35661137 + 7630403G23Rik lincRNA lincRNA MGP_NODShiLtJ_T0092174.1 MGP_NODShiLtJ_G0034686.1 mouse_genomes_project 9 62658485 62679496 + MGP_NODShiLtJ_P0092174 Stoml1 protein_coding protein_coding MGP_NODShiLtJ_T0090906.1 MGP_NODShiLtJ_G0034219.1 mouse_genomes_project 9 20710343 20736794 - MGP_NODShiLtJ_P0090906 Zfp266 protein_coding protein_coding MGP_NODShiLtJ_T0090907.1 MGP_NODShiLtJ_G0034219.1 mouse_genomes_project 9 20714326 20736785 - MGP_NODShiLtJ_P0090907 Zfp266 protein_coding protein_coding MGP_NODShiLtJ_T0094923.1 MGP_NODShiLtJ_G0035289.1 mouse_genomes_project 9 136330492 136336100 + MGP_NODShiLtJ_P0094923 Ccr5 protein_coding protein_coding MGP_NODShiLtJ_T0094924.1 MGP_NODShiLtJ_G0035289.1 mouse_genomes_project 9 136330522 136334188 + Ccr5 protein_coding processed_transcript MGP_NODShiLtJ_T0094925.1 MGP_NODShiLtJ_G0035289.1 mouse_genomes_project 9 136330522 136340801 + MGP_NODShiLtJ_P0094925 Ccr5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094926.1 MGP_NODShiLtJ_G0035289.1 mouse_genomes_project 9 136330530 136333652 + MGP_NODShiLtJ_P0094926 Ccr5 protein_coding protein_coding MGP_NODShiLtJ_T0094927.1 MGP_NODShiLtJ_G0035289.1 mouse_genomes_project 9 136335602 136339154 + Ccr5 protein_coding processed_transcript MGP_NODShiLtJ_T0094928.1 MGP_NODShiLtJ_G0035289.1 mouse_genomes_project 9 136337651 136357217 + Ccr5 protein_coding processed_transcript MGP_NODShiLtJ_T0091416.1 MGP_NODShiLtJ_G0034420.1 mouse_genomes_project 9 41235692 41236743 + MGP_NODShiLtJ_P0091416 Olfr926 protein_coding protein_coding MGP_NODShiLtJ_T0099613.1 MGP_NODShiLtJ_G0038007.1 mouse_genomes_project 9 72264610 72264708 - Gm24225 snRNA snRNA MGP_NODShiLtJ_T0091604.1 MGP_NODShiLtJ_G0034510.1 mouse_genomes_project 9 47666697 47668749 - MGP_NODShiLtJ_P0091604 Upk2 protein_coding protein_coding MGP_NODShiLtJ_T0090959.1 MGP_NODShiLtJ_G0034239.1 mouse_genomes_project 9 21320685 21339474 - MGP_NODShiLtJ_P0090959 Raver1 protein_coding protein_coding MGP_NODShiLtJ_T0011632.1 MGP_NODShiLtJ_G0009765.1 mouse_genomes_project 9 96707575 96707865 + Gm26461 misc_RNA misc_RNA MGP_NODShiLtJ_T0094475.1 MGP_NODShiLtJ_G0035153.1 mouse_genomes_project 9 121689977 121695568 + MGP_NODShiLtJ_P0094475 Prss42 protein_coding protein_coding MGP_NODShiLtJ_T0091763.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990717 51340171 + MGP_NODShiLtJ_P0091763 Cadm1 protein_coding protein_coding MGP_NODShiLtJ_T0091764.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990755 51336437 + MGP_NODShiLtJ_P0091764 Cadm1 protein_coding protein_coding MGP_NODShiLtJ_T0091765.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990788 51344429 + MGP_NODShiLtJ_P0091765 Cadm1 protein_coding protein_coding MGP_NODShiLtJ_T0091766.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990801 51340166 + MGP_NODShiLtJ_P0091766 Cadm1 protein_coding protein_coding MGP_NODShiLtJ_T0091767.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990801 51336879 + MGP_NODShiLtJ_P0091767 Cadm1 protein_coding protein_coding MGP_NODShiLtJ_T0091768.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990896 51300127 + Cadm1 protein_coding retained_intron MGP_NODShiLtJ_T0091769.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990896 51272303 + Cadm1 protein_coding retained_intron MGP_NODShiLtJ_T0091770.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990917 51295080 + Cadm1 protein_coding processed_transcript MGP_NODShiLtJ_T0091771.1 MGP_NODShiLtJ_G0034555.1 mouse_genomes_project 9 50990917 51336240 + MGP_NODShiLtJ_P0091771 Cadm1 protein_coding protein_coding MGP_NODShiLtJ_T0002336.1 MGP_NODShiLtJ_G0002246.1 mouse_genomes_project 9 78975387 78977620 + TEC TEC MGP_NODShiLtJ_T0092819.1 MGP_NODShiLtJ_G0034844.1 mouse_genomes_project 9 82355315 82404128 - MGP_NODShiLtJ_P0092819 Gfral protein_coding protein_coding MGP_NODShiLtJ_T0092820.1 MGP_NODShiLtJ_G0034844.1 mouse_genomes_project 9 82355315 82404128 - MGP_NODShiLtJ_P0092820 Gfral protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091734.1 MGP_NODShiLtJ_G0034546.1 mouse_genomes_project 9 49359499 49568947 + MGP_NODShiLtJ_P0091734 Sik3 protein_coding protein_coding MGP_NODShiLtJ_T0091735.1 MGP_NODShiLtJ_G0034546.1 mouse_genomes_project 9 49359543 49567025 + MGP_NODShiLtJ_P0091735 Sik3 protein_coding protein_coding MGP_NODShiLtJ_T0091736.1 MGP_NODShiLtJ_G0034546.1 mouse_genomes_project 9 49359679 49565984 + MGP_NODShiLtJ_P0091736 Sik3 protein_coding protein_coding MGP_NODShiLtJ_T0091737.1 MGP_NODShiLtJ_G0034546.1 mouse_genomes_project 9 49359711 49547629 + MGP_NODShiLtJ_P0091737 Sik3 protein_coding protein_coding MGP_NODShiLtJ_T0091738.1 MGP_NODShiLtJ_G0034546.1 mouse_genomes_project 9 49500360 49568941 + Sik3 protein_coding processed_transcript MGP_NODShiLtJ_T0091739.1 MGP_NODShiLtJ_G0034546.1 mouse_genomes_project 9 49564321 49565984 + MGP_NODShiLtJ_P0091739 Sik3 protein_coding protein_coding MGP_NODShiLtJ_T0094010.1 MGP_NODShiLtJ_G0035081.1 mouse_genomes_project 9 118533786 118537346 + MGP_NODShiLtJ_P0094010 Gmppb protein_coding protein_coding MGP_NODShiLtJ_T0094011.1 MGP_NODShiLtJ_G0035081.1 mouse_genomes_project 9 118533813 118534126 + Gmppb protein_coding processed_transcript MGP_NODShiLtJ_T0094012.1 MGP_NODShiLtJ_G0035081.1 mouse_genomes_project 9 118533833 118536461 + Gmppb protein_coding retained_intron MGP_NODShiLtJ_T0094013.1 MGP_NODShiLtJ_G0035081.1 mouse_genomes_project 9 118533869 118536247 + MGP_NODShiLtJ_P0094013 Gmppb protein_coding protein_coding MGP_NODShiLtJ_T0094014.1 MGP_NODShiLtJ_G0035081.1 mouse_genomes_project 9 118533999 118536064 + Gmppb protein_coding retained_intron MGP_NODShiLtJ_T0091033.1 MGP_NODShiLtJ_G0034264.1 mouse_genomes_project 9 22274954 22285662 - MGP_NODShiLtJ_P0091033 Rab3d protein_coding protein_coding MGP_NODShiLtJ_T0091034.1 MGP_NODShiLtJ_G0034264.1 mouse_genomes_project 9 22274973 22285609 - MGP_NODShiLtJ_P0091034 Rab3d protein_coding protein_coding MGP_NODShiLtJ_T0091035.1 MGP_NODShiLtJ_G0034264.1 mouse_genomes_project 9 22276108 22285587 - MGP_NODShiLtJ_P0091035 Rab3d protein_coding protein_coding MGP_NODShiLtJ_T0091036.1 MGP_NODShiLtJ_G0034264.1 mouse_genomes_project 9 22282355 22285559 - MGP_NODShiLtJ_P0091036 Rab3d protein_coding protein_coding MGP_NODShiLtJ_T0091037.1 MGP_NODShiLtJ_G0034264.1 mouse_genomes_project 9 22283078 22285591 - Rab3d protein_coding retained_intron MGP_NODShiLtJ_T0018431.1 MGP_NODShiLtJ_G0015629.1 mouse_genomes_project 9 125715788 125728159 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018432.1 MGP_NODShiLtJ_G0015629.1 mouse_genomes_project 9 125715816 125727376 + processed_transcript processed_transcript MGP_NODShiLtJ_T0018433.1 MGP_NODShiLtJ_G0015629.1 mouse_genomes_project 9 125715908 125718399 + processed_transcript processed_transcript MGP_NODShiLtJ_T0092938.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87100268 87264324 + MGP_NODShiLtJ_P0092938 Myo6 protein_coding protein_coding MGP_NODShiLtJ_T0092939.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87100275 87103262 + Myo6 protein_coding retained_intron MGP_NODShiLtJ_T0092940.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87100277 87264323 + MGP_NODShiLtJ_P0092940 Myo6 protein_coding protein_coding MGP_NODShiLtJ_T0092941.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87100464 87260681 + MGP_NODShiLtJ_P0092941 Myo6 protein_coding protein_coding MGP_NODShiLtJ_T0092942.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87159758 87260634 + MGP_NODShiLtJ_P0092942 Myo6 protein_coding protein_coding MGP_NODShiLtJ_T0092943.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87159776 87264324 + MGP_NODShiLtJ_P0092943 Myo6 protein_coding protein_coding MGP_NODShiLtJ_T0092944.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87159784 87264324 + MGP_NODShiLtJ_P0092944 Myo6 protein_coding protein_coding MGP_NODShiLtJ_T0092945.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87209216 87213819 + Myo6 protein_coding retained_intron MGP_NODShiLtJ_T0092946.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87233882 87234971 + Myo6 protein_coding retained_intron MGP_NODShiLtJ_T0092947.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87234744 87241105 + Myo6 protein_coding retained_intron MGP_NODShiLtJ_T0092948.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87258368 87260379 + Myo6 protein_coding processed_transcript MGP_NODShiLtJ_T0092949.1 MGP_NODShiLtJ_G0034876.1 mouse_genomes_project 9 87259497 87261186 + Myo6 protein_coding retained_intron MGP_NODShiLtJ_T0094890.1 MGP_NODShiLtJ_G0035277.1 mouse_genomes_project 9 135623509 135686574 + MGP_NODShiLtJ_P0094890 Sacm1l protein_coding protein_coding MGP_NODShiLtJ_T0092157.1 MGP_NODShiLtJ_G0034684.1 mouse_genomes_project 9 62594700 62600693 - MGP_NODShiLtJ_P0092157 Islr2 protein_coding protein_coding MGP_NODShiLtJ_T0092158.1 MGP_NODShiLtJ_G0034684.1 mouse_genomes_project 9 62594700 62600207 - MGP_NODShiLtJ_P0092158 Islr2 protein_coding protein_coding MGP_NODShiLtJ_T0092159.1 MGP_NODShiLtJ_G0034684.1 mouse_genomes_project 9 62594700 62602731 - MGP_NODShiLtJ_P0092159 Islr2 protein_coding protein_coding MGP_NODShiLtJ_T0092160.1 MGP_NODShiLtJ_G0034684.1 mouse_genomes_project 9 62594700 62600942 - MGP_NODShiLtJ_P0092160 Islr2 protein_coding protein_coding MGP_NODShiLtJ_T0092161.1 MGP_NODShiLtJ_G0034684.1 mouse_genomes_project 9 62594700 62600119 - MGP_NODShiLtJ_P0092161 Islr2 protein_coding protein_coding MGP_NODShiLtJ_T0094744.1 MGP_NODShiLtJ_G0035229.1 mouse_genomes_project 9 131931246 131934020 + MGP_NODShiLtJ_P0094744 Ccr8 protein_coding protein_coding MGP_NODShiLtJ_T0100893.1 MGP_NODShiLtJ_G0039287.1 mouse_genomes_project 9 69118115 69118214 + Gm23136 snoRNA snoRNA MGP_NODShiLtJ_T0002343.1 MGP_NODShiLtJ_G0002253.1 mouse_genomes_project 9 83848669 83849220 + TEC TEC MGP_NODShiLtJ_T0005378.1 MGP_NODShiLtJ_G0004552.1 mouse_genomes_project 9 49183198 49184787 - Gm16536 antisense antisense MGP_NODShiLtJ_T0100864.1 MGP_NODShiLtJ_G0039258.1 mouse_genomes_project 9 14299778 14299878 + snoRNA snoRNA MGP_NODShiLtJ_T0100887.1 MGP_NODShiLtJ_G0039281.1 mouse_genomes_project 9 56111066 56111199 + Gm25562 snoRNA snoRNA MGP_NODShiLtJ_T0091245.1 MGP_NODShiLtJ_G0034333.1 mouse_genomes_project 9 36910264 36918322 + MGP_NODShiLtJ_P0091245 Rpusd4 protein_coding protein_coding MGP_NODShiLtJ_T0091246.1 MGP_NODShiLtJ_G0034333.1 mouse_genomes_project 9 36914696 36917567 + Rpusd4 protein_coding retained_intron MGP_NODShiLtJ_T0091247.1 MGP_NODShiLtJ_G0034333.1 mouse_genomes_project 9 36915052 36916167 + Rpusd4 protein_coding retained_intron MGP_NODShiLtJ_T0091248.1 MGP_NODShiLtJ_G0034333.1 mouse_genomes_project 9 36917553 36920065 + MGP_NODShiLtJ_P0091248 Rpusd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100910.1 MGP_NODShiLtJ_G0039304.1 mouse_genomes_project 9 96130411 96130541 - Gm23176 snoRNA snoRNA MGP_NODShiLtJ_T0091818.1 MGP_NODShiLtJ_G0034579.1 mouse_genomes_project 9 54281835 54289346 - MGP_NODShiLtJ_P0091818 Sdhd protein_coding protein_coding MGP_NODShiLtJ_T0010985.1 MGP_NODShiLtJ_G0009118.1 mouse_genomes_project 9 118575450 118575536 + Mir7088 miRNA miRNA MGP_NODShiLtJ_T0093261.1 MGP_NODShiLtJ_G0034946.1 mouse_genomes_project 9 106033279 106131813 - MGP_NODShiLtJ_P0093261 Rasa2 protein_coding protein_coding MGP_NODShiLtJ_T0093262.1 MGP_NODShiLtJ_G0034946.1 mouse_genomes_project 9 106036284 106039639 - Rasa2 protein_coding retained_intron MGP_NODShiLtJ_T0093263.1 MGP_NODShiLtJ_G0034946.1 mouse_genomes_project 9 106040741 106131732 - MGP_NODShiLtJ_P0093263 Rasa2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093264.1 MGP_NODShiLtJ_G0034946.1 mouse_genomes_project 9 106052720 106067982 - Rasa2 protein_coding retained_intron MGP_NODShiLtJ_T0093265.1 MGP_NODShiLtJ_G0034946.1 mouse_genomes_project 9 106053426 106060005 - Rasa2 protein_coding retained_intron MGP_NODShiLtJ_T0093266.1 MGP_NODShiLtJ_G0034946.1 mouse_genomes_project 9 106067826 106076494 - Rasa2 protein_coding retained_intron MGP_NODShiLtJ_T0091093.1 MGP_NODShiLtJ_G0034291.1 mouse_genomes_project 9 25034790 25141339 - MGP_NODShiLtJ_P0091093 Dpy19l1 protein_coding protein_coding MGP_NODShiLtJ_T0091094.1 MGP_NODShiLtJ_G0034291.1 mouse_genomes_project 9 25034792 25156454 - MGP_NODShiLtJ_P0091094 Dpy19l1 protein_coding protein_coding MGP_NODShiLtJ_T0091095.1 MGP_NODShiLtJ_G0034291.1 mouse_genomes_project 9 25034815 25156454 - MGP_NODShiLtJ_P0091095 Dpy19l1 protein_coding protein_coding MGP_NODShiLtJ_T0091096.1 MGP_NODShiLtJ_G0034291.1 mouse_genomes_project 9 25035063 25047814 - Dpy19l1 protein_coding retained_intron MGP_NODShiLtJ_T0091097.1 MGP_NODShiLtJ_G0034291.1 mouse_genomes_project 9 25046163 25050279 - Dpy19l1 protein_coding retained_intron MGP_NODShiLtJ_T0091098.1 MGP_NODShiLtJ_G0034291.1 mouse_genomes_project 9 25129466 25150469 - Dpy19l1 protein_coding processed_transcript MGP_NODShiLtJ_T0009273.1 MGP_NODShiLtJ_G0007442.1 mouse_genomes_project 9 132854236 132855715 - 1700020M21Rik lincRNA lincRNA MGP_NODShiLtJ_T0092091.1 MGP_NODShiLtJ_G0034660.1 mouse_genomes_project 9 61509692 61524394 + MGP_NODShiLtJ_P0092091 Trcg1 protein_coding protein_coding MGP_NODShiLtJ_T0093075.1 MGP_NODShiLtJ_G0034900.1 mouse_genomes_project 9 95187564 95230185 + MGP_NODShiLtJ_P0093075 Mrap2 protein_coding protein_coding MGP_NODShiLtJ_T0093076.1 MGP_NODShiLtJ_G0034900.1 mouse_genomes_project 9 95187564 95230185 + MGP_NODShiLtJ_P0093076 Mrap2 protein_coding protein_coding MGP_NODShiLtJ_T0093077.1 MGP_NODShiLtJ_G0034900.1 mouse_genomes_project 9 95187601 95230185 + MGP_NODShiLtJ_P0093077 Mrap2 protein_coding protein_coding MGP_NODShiLtJ_T0091255.1 MGP_NODShiLtJ_G0034335.1 mouse_genomes_project 9 37186473 37208367 - MGP_NODShiLtJ_P0091255 Ddx25 protein_coding protein_coding MGP_NODShiLtJ_T0002372.1 MGP_NODShiLtJ_G0002281.1 mouse_genomes_project 9 107531973 107533523 - TEC TEC MGP_NODShiLtJ_T0011636.1 MGP_NODShiLtJ_G0009769.1 mouse_genomes_project 9 116970064 116970324 + Gm26185 misc_RNA misc_RNA MGP_NODShiLtJ_T0091675.1 MGP_NODShiLtJ_G0034529.1 mouse_genomes_project 9 48399868 48430090 - MGP_NODShiLtJ_P0091675 Gm10684 protein_coding protein_coding MGP_NODShiLtJ_T0090648.1 MGP_NODShiLtJ_G0034111.1 mouse_genomes_project 9 1531280 1534606 + MGP_NODShiLtJ_P0090648 Msantd4 protein_coding protein_coding MGP_NODShiLtJ_T0010976.1 MGP_NODShiLtJ_G0009109.1 mouse_genomes_project 9 98113201 98113270 - Mir184 miRNA miRNA MGP_NODShiLtJ_T0092885.1 MGP_NODShiLtJ_G0034862.1 mouse_genomes_project 9 84961966 84966617 - MGP_NODShiLtJ_P0092885 Gm8074 protein_coding protein_coding MGP_NODShiLtJ_T0002318.1 MGP_NODShiLtJ_G0002228.1 mouse_genomes_project 9 77644910 77647203 - TEC TEC MGP_NODShiLtJ_T0099639.1 MGP_NODShiLtJ_G0038033.1 mouse_genomes_project 9 116289844 116289921 + Gm24631 snRNA snRNA MGP_NODShiLtJ_T0092447.1 MGP_NODShiLtJ_G0034764.1 mouse_genomes_project 9 70994388 71065716 - MGP_NODShiLtJ_P0092447 Trip4 protein_coding protein_coding MGP_NODShiLtJ_T0092448.1 MGP_NODShiLtJ_G0034764.1 mouse_genomes_project 9 71000060 71017069 - Trip4 protein_coding retained_intron MGP_NODShiLtJ_T0092449.1 MGP_NODShiLtJ_G0034764.1 mouse_genomes_project 9 71061671 71093511 - MGP_NODShiLtJ_P0092449 Trip4 protein_coding protein_coding MGP_NODShiLtJ_T0092453.1 MGP_NODShiLtJ_G0034764.1 mouse_genomes_project 9 71076455 71093444 - Trip4 protein_coding processed_transcript MGP_NODShiLtJ_T0092454.1 MGP_NODShiLtJ_G0034764.1 mouse_genomes_project 9 71076793 71093511 - Trip4 protein_coding processed_transcript MGP_NODShiLtJ_T0092455.1 MGP_NODShiLtJ_G0034764.1 mouse_genomes_project 9 71077259 71093519 - Trip4 protein_coding processed_transcript MGP_NODShiLtJ_T0092456.1 MGP_NODShiLtJ_G0034764.1 mouse_genomes_project 9 71080156 71093511 - Trip4 protein_coding retained_intron MGP_NODShiLtJ_T0100876.1 MGP_NODShiLtJ_G0039270.1 mouse_genomes_project 9 36778495 36778639 + Gm24262 snoRNA snoRNA MGP_NODShiLtJ_T0091507.1 MGP_NODShiLtJ_G0034475.1 mouse_genomes_project 9 45394214 45408569 - Tecta protein_coding processed_transcript MGP_NODShiLtJ_T0091508.1 MGP_NODShiLtJ_G0034475.1 mouse_genomes_project 9 45394217 45466052 - MGP_NODShiLtJ_P0091508 Tecta protein_coding protein_coding MGP_NODShiLtJ_T0091509.1 MGP_NODShiLtJ_G0034475.1 mouse_genomes_project 9 45394290 45465850 - MGP_NODShiLtJ_P0091509 Tecta protein_coding protein_coding MGP_NODShiLtJ_T0002418.1 MGP_NODShiLtJ_G0002327.1 mouse_genomes_project 9 120864306 120865981 + TEC TEC MGP_NODShiLtJ_T0094600.1 MGP_NODShiLtJ_G0035177.1 mouse_genomes_project 9 124996302 125110469 + MGP_NODShiLtJ_P0094600 Clasp2 protein_coding protein_coding MGP_NODShiLtJ_T0094601.1 MGP_NODShiLtJ_G0035177.1 mouse_genomes_project 9 124996302 125110469 + MGP_NODShiLtJ_P0094601 Clasp2 protein_coding protein_coding MGP_NODShiLtJ_T0094602.1 MGP_NODShiLtJ_G0035177.1 mouse_genomes_project 9 124996316 125108913 + MGP_NODShiLtJ_P0094602 Clasp2 protein_coding protein_coding MGP_NODShiLtJ_T0100919.1 MGP_NODShiLtJ_G0039313.1 mouse_genomes_project 9 114626386 114626528 - Gm25904 snoRNA snoRNA MGP_NODShiLtJ_T0009239.1 MGP_NODShiLtJ_G0007417.1 mouse_genomes_project 9 112379255 112388053 + Gm26846 lincRNA lincRNA MGP_NODShiLtJ_T0091443.1 MGP_NODShiLtJ_G0034441.1 mouse_genomes_project 9 42339941 42340877 + MGP_NODShiLtJ_P0091443 Olfr963 protein_coding protein_coding MGP_NODShiLtJ_T0093802.1 MGP_NODShiLtJ_G0035055.1 mouse_genomes_project 9 118000431 118004432 + MGP_NODShiLtJ_P0093802 Zmynd10 protein_coding protein_coding MGP_NODShiLtJ_T0093803.1 MGP_NODShiLtJ_G0035055.1 mouse_genomes_project 9 118000437 118001003 + Zmynd10 protein_coding processed_transcript MGP_NODShiLtJ_T0093804.1 MGP_NODShiLtJ_G0035055.1 mouse_genomes_project 9 118000587 118004432 + MGP_NODShiLtJ_P0093804 Zmynd10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093805.1 MGP_NODShiLtJ_G0035055.1 mouse_genomes_project 9 118002280 118003328 + Zmynd10 protein_coding retained_intron MGP_NODShiLtJ_T0093806.1 MGP_NODShiLtJ_G0035055.1 mouse_genomes_project 9 118003601 118004332 + Zmynd10 protein_coding retained_intron MGP_NODShiLtJ_T0092908.1 MGP_NODShiLtJ_G0034870.1 mouse_genomes_project 9 85335144 85442026 + MGP_NODShiLtJ_P0092908 Cd109 protein_coding protein_coding MGP_NODShiLtJ_T0092909.1 MGP_NODShiLtJ_G0034870.1 mouse_genomes_project 9 85335361 85337694 + Cd109 protein_coding processed_transcript MGP_NODShiLtJ_T0002308.1 MGP_NODShiLtJ_G0002218.1 mouse_genomes_project 9 36179761 36198204 + TEC TEC MGP_NODShiLtJ_T0092014.1 MGP_NODShiLtJ_G0034639.1 mouse_genomes_project 9 59394472 59513759 + MGP_NODShiLtJ_P0092014 Tmem266 protein_coding protein_coding MGP_NODShiLtJ_T0092015.1 MGP_NODShiLtJ_G0034639.1 mouse_genomes_project 9 59394506 59513759 + MGP_NODShiLtJ_P0092015 Tmem266 protein_coding protein_coding MGP_NODShiLtJ_T0092016.1 MGP_NODShiLtJ_G0034639.1 mouse_genomes_project 9 59400758 59512772 + Tmem266 protein_coding processed_transcript MGP_NODShiLtJ_T0015993.1 MGP_NODShiLtJ_G0014101.1 mouse_genomes_project 9 98351367 98352010 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091901.1 MGP_NODShiLtJ_G0034598.1 mouse_genomes_project 9 55017912 55058080 - MGP_NODShiLtJ_P0091901 1810046K07Rik protein_coding protein_coding MGP_NODShiLtJ_T0091902.1 MGP_NODShiLtJ_G0034598.1 mouse_genomes_project 9 55018670 55041900 - MGP_NODShiLtJ_P0091902 1810046K07Rik protein_coding protein_coding MGP_NODShiLtJ_T0015934.1 MGP_NODShiLtJ_G0014042.1 mouse_genomes_project 9 64345764 64346256 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009208.1 MGP_NODShiLtJ_G0007393.1 mouse_genomes_project 9 96377731 96380873 + Gm28231 lincRNA lincRNA MGP_NODShiLtJ_T0091365.1 MGP_NODShiLtJ_G0034376.1 mouse_genomes_project 9 39823286 39828857 + MGP_NODShiLtJ_P0091365 protein_coding protein_coding MGP_NODShiLtJ_T0093209.1 MGP_NODShiLtJ_G0034937.1 mouse_genomes_project 9 104996876 105060785 + MGP_NODShiLtJ_P0093209 Pcolce2 protein_coding protein_coding MGP_NODShiLtJ_T0093210.1 MGP_NODShiLtJ_G0034937.1 mouse_genomes_project 9 105042340 105057372 + Pcolce2 protein_coding processed_transcript MGP_NODShiLtJ_T0090888.1 MGP_NODShiLtJ_G0034216.1 mouse_genomes_project 9 20534194 20570948 - MGP_NODShiLtJ_P0090888 Zfp560 protein_coding protein_coding MGP_NODShiLtJ_T0090889.1 MGP_NODShiLtJ_G0034216.1 mouse_genomes_project 9 20541334 20570948 - Zfp560 protein_coding retained_intron MGP_NODShiLtJ_T0094625.1 MGP_NODShiLtJ_G0035191.1 mouse_genomes_project 9 126136008 126153577 + MGP_NODShiLtJ_P0094625 Cmtm6 protein_coding protein_coding MGP_NODShiLtJ_T0005370.1 MGP_NODShiLtJ_G0004546.1 mouse_genomes_project 9 38968397 38973313 + Gm3896 antisense antisense MGP_NODShiLtJ_T0093471.1 MGP_NODShiLtJ_G0034994.1 mouse_genomes_project 9 113271417 113287432 - MGP_NODShiLtJ_P0093471 Srprb protein_coding protein_coding MGP_NODShiLtJ_T0093472.1 MGP_NODShiLtJ_G0034994.1 mouse_genomes_project 9 113272475 113287424 - Srprb protein_coding retained_intron MGP_NODShiLtJ_T0093474.1 MGP_NODShiLtJ_G0034994.1 mouse_genomes_project 9 113273737 113275648 - Srprb protein_coding processed_transcript MGP_NODShiLtJ_T0094481.1 MGP_NODShiLtJ_G0035156.1 mouse_genomes_project 9 121734629 121742902 + MGP_NODShiLtJ_P0094481 Prss45 protein_coding protein_coding MGP_NODShiLtJ_T0094482.1 MGP_NODShiLtJ_G0035156.1 mouse_genomes_project 9 121734629 121742899 + MGP_NODShiLtJ_P0094482 Prss45 protein_coding protein_coding MGP_NODShiLtJ_T0092340.1 MGP_NODShiLtJ_G0034731.1 mouse_genomes_project 9 68871550 68945513 - MGP_NODShiLtJ_P0092340 Smad6 protein_coding protein_coding MGP_NODShiLtJ_T0092341.1 MGP_NODShiLtJ_G0034731.1 mouse_genomes_project 9 68872484 68940429 - Smad6 protein_coding processed_transcript MGP_NODShiLtJ_T0092342.1 MGP_NODShiLtJ_G0034731.1 mouse_genomes_project 9 68945214 68945486 - MGP_NODShiLtJ_P0092342 Smad6 protein_coding protein_coding MGP_NODShiLtJ_T0005448.1 MGP_NODShiLtJ_G0004595.1 mouse_genomes_project 9 106545313 106551387 + Gm16010 antisense antisense MGP_NODShiLtJ_T0005449.1 MGP_NODShiLtJ_G0004595.1 mouse_genomes_project 9 106546821 106547793 + Gm16010 antisense antisense MGP_NODShiLtJ_T0009127.1 MGP_NODShiLtJ_G0007326.1 mouse_genomes_project 9 20825259 20829976 - Gm26521 lincRNA lincRNA MGP_NODShiLtJ_T0090874.1 MGP_NODShiLtJ_G0034202.1 mouse_genomes_project 9 19661790 19684273 + MGP_NODShiLtJ_P0090874 Zfp317 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0015965.1 MGP_NODShiLtJ_G0014073.1 mouse_genomes_project 9 83407151 83407389 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005409.1 MGP_NODShiLtJ_G0004570.1 mouse_genomes_project 9 74810773 74827058 - Gm15511 antisense antisense MGP_NODShiLtJ_T0094311.1 MGP_NODShiLtJ_G0035127.1 mouse_genomes_project 9 119727243 120060040 - MGP_NODShiLtJ_P0094311 protein_coding protein_coding MGP_NODShiLtJ_T0094312.1 MGP_NODShiLtJ_G0035127.1 mouse_genomes_project 9 119732508 120060039 - MGP_NODShiLtJ_P0094312 protein_coding protein_coding MGP_NODShiLtJ_T0005392.1 MGP_NODShiLtJ_G0004560.1 mouse_genomes_project 9 60433390 60444744 + Peak1os antisense antisense MGP_NODShiLtJ_T0016027.1 MGP_NODShiLtJ_G0014135.1 mouse_genomes_project 9 111250984 111251390 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093112.1 MGP_NODShiLtJ_G0034911.1 mouse_genomes_project 9 97456311 97472991 + MGP_NODShiLtJ_P0093112 protein_coding protein_coding MGP_NODShiLtJ_T0091023.1 MGP_NODShiLtJ_G0034258.1 mouse_genomes_project 9 21953596 22054464 + MGP_NODShiLtJ_P0091023 Smarca4 protein_coding protein_coding MGP_NODShiLtJ_T0091024.1 MGP_NODShiLtJ_G0034258.1 mouse_genomes_project 9 21953596 22054451 + MGP_NODShiLtJ_P0091024 Smarca4 protein_coding protein_coding MGP_NODShiLtJ_T0091025.1 MGP_NODShiLtJ_G0034258.1 mouse_genomes_project 9 21953692 22053609 + MGP_NODShiLtJ_P0091025 Smarca4 protein_coding protein_coding MGP_NODShiLtJ_T0091026.1 MGP_NODShiLtJ_G0034258.1 mouse_genomes_project 9 21974860 22027353 + MGP_NODShiLtJ_P0091026 Smarca4 protein_coding protein_coding MGP_NODShiLtJ_T0100906.1 MGP_NODShiLtJ_G0039300.1 mouse_genomes_project 9 93338233 93338369 + Gm25125 snoRNA snoRNA MGP_NODShiLtJ_T0015977.1 MGP_NODShiLtJ_G0014085.1 mouse_genomes_project 9 90947757 90948145 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091678.1 MGP_NODShiLtJ_G0034531.1 mouse_genomes_project 9 48432920 48448633 + MGP_NODShiLtJ_P0091678 Scn4b protein_coding protein_coding MGP_NODShiLtJ_T0002348.1 MGP_NODShiLtJ_G0002258.1 mouse_genomes_project 9 93642217 93643569 + TEC TEC MGP_NODShiLtJ_T0015948.1 MGP_NODShiLtJ_G0014056.1 mouse_genomes_project 9 78312418 78312626 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002384.1 MGP_NODShiLtJ_G0002293.1 mouse_genomes_project 9 111078629 111083889 + TEC TEC MGP_NODShiLtJ_T0092597.1 MGP_NODShiLtJ_G0034793.1 mouse_genomes_project 9 75536195 75544655 - MGP_NODShiLtJ_P0092597 Gcnt3 protein_coding protein_coding MGP_NODShiLtJ_T0002322.1 MGP_NODShiLtJ_G0002232.1 mouse_genomes_project 9 78032064 78035209 + TEC TEC MGP_NODShiLtJ_T0009202.1 MGP_NODShiLtJ_G0007389.1 mouse_genomes_project 9 89553433 89556639 + 1700063H06Rik lincRNA lincRNA MGP_NODShiLtJ_T0009129.1 MGP_NODShiLtJ_G0007328.1 mouse_genomes_project 9 21683338 21689824 - Gm16853 lincRNA lincRNA MGP_NODShiLtJ_T0015921.1 MGP_NODShiLtJ_G0014029.1 mouse_genomes_project 9 38398908 38399107 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015979.1 MGP_NODShiLtJ_G0014087.1 mouse_genomes_project 9 91500668 91502629 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092481.1 MGP_NODShiLtJ_G0034770.1 mouse_genomes_project 9 71316914 71331587 + MGP_NODShiLtJ_P0092481 Fam96a protein_coding protein_coding MGP_NODShiLtJ_T0092450.1 MGP_NODShiLtJ_G0034765.1 mouse_genomes_project 9 71072097 71086360 + MGP_NODShiLtJ_P0092450 2810417H13Rik protein_coding protein_coding MGP_NODShiLtJ_T0092451.1 MGP_NODShiLtJ_G0034765.1 mouse_genomes_project 9 71072180 71075698 + 2810417H13Rik protein_coding retained_intron MGP_NODShiLtJ_T0092452.1 MGP_NODShiLtJ_G0034765.1 mouse_genomes_project 9 71072222 71075026 + 2810417H13Rik protein_coding retained_intron MGP_NODShiLtJ_T0009260.1 MGP_NODShiLtJ_G0007432.1 mouse_genomes_project 9 121536863 121537640 + Gm42470 lincRNA lincRNA MGP_NODShiLtJ_T0091210.1 MGP_NODShiLtJ_G0034327.1 mouse_genomes_project 9 36698047 36749898 - MGP_NODShiLtJ_P0091210 St3gal4 protein_coding protein_coding MGP_NODShiLtJ_T0093963.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118454737 118455304 + Uba7 protein_coding processed_transcript MGP_NODShiLtJ_T0093964.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118454766 118463289 + MGP_NODShiLtJ_P0093964 Uba7 protein_coding protein_coding MGP_NODShiLtJ_T0093965.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118454802 118463289 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093966.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118454807 118463289 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093967.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118454814 118459728 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093968.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118454838 118455383 + Uba7 protein_coding processed_transcript MGP_NODShiLtJ_T0093969.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118454838 118463289 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093970.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118454887 118463291 + MGP_NODShiLtJ_P0093970 Uba7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093971.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118455188 118463293 + MGP_NODShiLtJ_P0093971 Uba7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093972.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118455540 118456199 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093973.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118456123 118456757 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093974.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118458971 118462018 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093975.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118460122 118462432 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093976.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118462257 118463286 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093977.1 MGP_NODShiLtJ_G0035075.1 mouse_genomes_project 9 118462267 118463184 + Uba7 protein_coding retained_intron MGP_NODShiLtJ_T0093059.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94761385 94883936 - MGP_NODShiLtJ_P0093059 Snap91 protein_coding protein_coding MGP_NODShiLtJ_T0093060.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94761395 94806902 - Snap91 protein_coding retained_intron MGP_NODShiLtJ_T0093061.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94761398 94883946 - MGP_NODShiLtJ_P0093061 Snap91 protein_coding protein_coding MGP_NODShiLtJ_T0093062.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94761398 94883946 - MGP_NODShiLtJ_P0093062 Snap91 protein_coding protein_coding MGP_NODShiLtJ_T0093063.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94762140 94883911 - MGP_NODShiLtJ_P0093063 Snap91 protein_coding protein_coding MGP_NODShiLtJ_T0093064.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94770864 94795147 - Snap91 protein_coding retained_intron MGP_NODShiLtJ_T0093065.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94789044 94795321 - Snap91 protein_coding retained_intron MGP_NODShiLtJ_T0093066.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94804647 94830548 - Snap91 protein_coding processed_transcript MGP_NODShiLtJ_T0093067.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94822870 94884151 - Snap91 protein_coding retained_intron MGP_NODShiLtJ_T0093068.1 MGP_NODShiLtJ_G0034897.1 mouse_genomes_project 9 94836334 94883894 - MGP_NODShiLtJ_P0093068 Snap91 protein_coding protein_coding MGP_NODShiLtJ_T0091075.1 MGP_NODShiLtJ_G0034287.1 mouse_genomes_project 9 22913951 22921720 + MGP_NODShiLtJ_P0091075 Gm17545 protein_coding protein_coding MGP_NODShiLtJ_T0094313.1 MGP_NODShiLtJ_G0035128.1 mouse_genomes_project 9 119765656 119783817 - MGP_NODShiLtJ_P0094313 Fbxw13 protein_coding protein_coding MGP_NODShiLtJ_T0094314.1 MGP_NODShiLtJ_G0035128.1 mouse_genomes_project 9 119765677 119783804 - MGP_NODShiLtJ_P0094314 Fbxw13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094315.1 MGP_NODShiLtJ_G0035128.1 mouse_genomes_project 9 119767954 119783362 - MGP_NODShiLtJ_P0094315 Fbxw13 protein_coding protein_coding MGP_NODShiLtJ_T0005423.1 MGP_NODShiLtJ_G0004582.1 mouse_genomes_project 9 87210475 87212602 - Gm27227 antisense antisense MGP_NODShiLtJ_T0100883.1 MGP_NODShiLtJ_G0039277.1 mouse_genomes_project 9 45382208 45382340 - Gm26272 snoRNA snoRNA MGP_NODShiLtJ_T0092131.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62423437 62515251 - MGP_NODShiLtJ_P0092131 Ccdc33 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092132.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62423444 62497927 - MGP_NODShiLtJ_P0092132 Ccdc33 protein_coding protein_coding MGP_NODShiLtJ_T0092133.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62423445 62515330 - MGP_NODShiLtJ_P0092133 Ccdc33 protein_coding protein_coding MGP_NODShiLtJ_T0092134.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62423449 62497855 - MGP_NODShiLtJ_P0092134 Ccdc33 protein_coding protein_coding MGP_NODShiLtJ_T0092135.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62423486 62425745 - Ccdc33 protein_coding retained_intron MGP_NODShiLtJ_T0092136.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62428001 62436640 - Ccdc33 protein_coding processed_transcript MGP_NODShiLtJ_T0092138.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62463074 62510864 - Ccdc33 protein_coding processed_transcript MGP_NODShiLtJ_T0092139.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62472586 62477643 - Ccdc33 protein_coding retained_intron MGP_NODShiLtJ_T0092142.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62481898 62497927 - Ccdc33 protein_coding retained_intron MGP_NODShiLtJ_T0092143.1 MGP_NODShiLtJ_G0034681.1 mouse_genomes_project 9 62507445 62515314 - MGP_NODShiLtJ_P0092143 Ccdc33 protein_coding protein_coding MGP_NODShiLtJ_T0091452.1 MGP_NODShiLtJ_G0034450.1 mouse_genomes_project 9 42648961 42649885 + MGP_NODShiLtJ_P0091452 Olfr229 protein_coding protein_coding MGP_NODShiLtJ_T0009235.1 MGP_NODShiLtJ_G0007413.1 mouse_genomes_project 9 109812556 109824928 + 4930519F24Rik lincRNA lincRNA MGP_NODShiLtJ_T0091364.1 MGP_NODShiLtJ_G0034375.1 mouse_genomes_project 9 39783927 39787321 + MGP_NODShiLtJ_P0091364 protein_coding protein_coding MGP_NODShiLtJ_T0005474.1 MGP_NODShiLtJ_G0004615.1 mouse_genomes_project 9 118000702 118003881 - Gm34106 antisense antisense MGP_NODShiLtJ_T0002374.1 MGP_NODShiLtJ_G0002283.1 mouse_genomes_project 9 108335867 108336383 - TEC TEC MGP_NODShiLtJ_T0092178.1 MGP_NODShiLtJ_G0034690.1 mouse_genomes_project 9 62959663 62976818 - MGP_NODShiLtJ_P0092178 Cd276 protein_coding protein_coding MGP_NODShiLtJ_T0092179.1 MGP_NODShiLtJ_G0034690.1 mouse_genomes_project 9 62959665 62991029 - MGP_NODShiLtJ_P0092179 Cd276 protein_coding protein_coding MGP_NODShiLtJ_T0100856.1 MGP_NODShiLtJ_G0039250.1 mouse_genomes_project 9 171922 172052 + Gm24918 snoRNA snoRNA MGP_NODShiLtJ_T0093014.1 MGP_NODShiLtJ_G0034889.1 mouse_genomes_project 9 93566642 93642474 - MGP_NODShiLtJ_P0093014 Ibtk protein_coding protein_coding MGP_NODShiLtJ_T0093015.1 MGP_NODShiLtJ_G0034889.1 mouse_genomes_project 9 93566836 93642474 - MGP_NODShiLtJ_P0093015 Ibtk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093016.1 MGP_NODShiLtJ_G0034889.1 mouse_genomes_project 9 93566850 93603623 - Ibtk protein_coding retained_intron MGP_NODShiLtJ_T0093017.1 MGP_NODShiLtJ_G0034889.1 mouse_genomes_project 9 93590961 93601337 - Ibtk protein_coding retained_intron MGP_NODShiLtJ_T0093018.1 MGP_NODShiLtJ_G0034889.1 mouse_genomes_project 9 93602982 93642454 - Ibtk protein_coding retained_intron MGP_NODShiLtJ_T0093019.1 MGP_NODShiLtJ_G0034889.1 mouse_genomes_project 9 93611090 93621045 - Ibtk protein_coding retained_intron MGP_NODShiLtJ_T0009131.1 MGP_NODShiLtJ_G0007330.1 mouse_genomes_project 9 22454495 22469465 + Gm16845 lincRNA lincRNA MGP_NODShiLtJ_T0093392.1 MGP_NODShiLtJ_G0034979.1 mouse_genomes_project 9 110419573 110438424 - MGP_NODShiLtJ_P0093392 Slc35g2 protein_coding protein_coding MGP_NODShiLtJ_T0093393.1 MGP_NODShiLtJ_G0034979.1 mouse_genomes_project 9 110419575 110420301 - Slc35g2 protein_coding processed_transcript MGP_NODShiLtJ_T0016023.1 MGP_NODShiLtJ_G0014131.1 mouse_genomes_project 9 109728649 109729475 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009236.1 MGP_NODShiLtJ_G0007414.1 mouse_genomes_project 9 110159138 110161025 - Gm28167 lincRNA lincRNA MGP_NODShiLtJ_T0093473.1 MGP_NODShiLtJ_G0034995.1 mouse_genomes_project 9 113273544 113315573 - MGP_NODShiLtJ_P0093473 Gm20425 protein_coding protein_coding MGP_NODShiLtJ_T0002360.1 MGP_NODShiLtJ_G0002269.1 mouse_genomes_project 9 98505863 98509206 - TEC TEC MGP_NODShiLtJ_T0091973.1 MGP_NODShiLtJ_G0034627.1 mouse_genomes_project 9 58732884 58752832 - MGP_NODShiLtJ_P0091973 Wdr61 protein_coding protein_coding MGP_NODShiLtJ_T0091974.1 MGP_NODShiLtJ_G0034627.1 mouse_genomes_project 9 58735304 58752921 - MGP_NODShiLtJ_P0091974 Wdr61 protein_coding protein_coding MGP_NODShiLtJ_T0091975.1 MGP_NODShiLtJ_G0034627.1 mouse_genomes_project 9 58737369 58738964 - Wdr61 protein_coding retained_intron MGP_NODShiLtJ_T0091976.1 MGP_NODShiLtJ_G0034627.1 mouse_genomes_project 9 58740674 58742507 - Wdr61 protein_coding retained_intron MGP_NODShiLtJ_T0100908.1 MGP_NODShiLtJ_G0039302.1 mouse_genomes_project 9 94690458 94690586 + Gm22138 snoRNA snoRNA MGP_NODShiLtJ_T0093044.1 MGP_NODShiLtJ_G0034893.1 mouse_genomes_project 9 94517131 94537090 - MGP_NODShiLtJ_P0093044 Pgm3 protein_coding protein_coding MGP_NODShiLtJ_T0093045.1 MGP_NODShiLtJ_G0034893.1 mouse_genomes_project 9 94517755 94537091 - MGP_NODShiLtJ_P0093045 Pgm3 protein_coding protein_coding MGP_NODShiLtJ_T0093046.1 MGP_NODShiLtJ_G0034893.1 mouse_genomes_project 9 94518010 94520695 - Pgm3 protein_coding retained_intron MGP_NODShiLtJ_T0093047.1 MGP_NODShiLtJ_G0034893.1 mouse_genomes_project 9 94518435 94537056 - Pgm3 protein_coding retained_intron MGP_NODShiLtJ_T0093048.1 MGP_NODShiLtJ_G0034893.1 mouse_genomes_project 9 94519277 94537105 - Pgm3 protein_coding retained_intron MGP_NODShiLtJ_T0100868.1 MGP_NODShiLtJ_G0039262.1 mouse_genomes_project 9 19160957 19161086 + Gm23048 snoRNA snoRNA MGP_NODShiLtJ_T0091134.1 MGP_NODShiLtJ_G0034307.1 mouse_genomes_project 9 28284910 28317062 + MGP_NODShiLtJ_P0091134 Igsf9b protein_coding protein_coding MGP_NODShiLtJ_T0091135.1 MGP_NODShiLtJ_G0034307.1 mouse_genomes_project 9 28284912 28321690 + MGP_NODShiLtJ_P0091135 Igsf9b protein_coding protein_coding MGP_NODShiLtJ_T0091136.1 MGP_NODShiLtJ_G0034307.1 mouse_genomes_project 9 28285136 28334045 + MGP_NODShiLtJ_P0091136 Igsf9b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092779.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81114861 81168191 + Myo5a protein_coding retained_intron MGP_NODShiLtJ_T0092780.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81115040 81282418 + MGP_NODShiLtJ_P0092780 Myo5a protein_coding protein_coding MGP_NODShiLtJ_T0092781.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81115058 81184564 + Myo5a protein_coding retained_intron MGP_NODShiLtJ_T0092782.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81115238 81277272 + MGP_NODShiLtJ_P0092782 Myo5a protein_coding protein_coding MGP_NODShiLtJ_T0092783.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81115504 81232869 + MGP_NODShiLtJ_P0092783 Myo5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092784.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81115539 81277675 + MGP_NODShiLtJ_P0092784 Myo5a protein_coding protein_coding MGP_NODShiLtJ_T0092785.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81195673 81202296 + Myo5a protein_coding retained_intron MGP_NODShiLtJ_T0092786.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81240528 81277206 + Myo5a protein_coding processed_transcript MGP_NODShiLtJ_T0092787.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81240591 81251398 + Myo5a protein_coding retained_intron MGP_NODShiLtJ_T0092788.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81242357 81253565 + MGP_NODShiLtJ_P0092788 Myo5a protein_coding protein_coding MGP_NODShiLtJ_T0092789.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81242456 81276715 + MGP_NODShiLtJ_P0092789 Myo5a protein_coding protein_coding MGP_NODShiLtJ_T0092790.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81242458 81258770 + MGP_NODShiLtJ_P0092790 Myo5a protein_coding protein_coding MGP_NODShiLtJ_T0092791.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81247189 81250292 + Myo5a protein_coding retained_intron MGP_NODShiLtJ_T0092792.1 MGP_NODShiLtJ_G0034831.1 mouse_genomes_project 9 81251070 81261203 + Myo5a protein_coding retained_intron MGP_NODShiLtJ_T0090721.1 MGP_NODShiLtJ_G0034138.1 mouse_genomes_project 9 6912062 6984656 + MGP_NODShiLtJ_P0090721 Pgr protein_coding protein_coding MGP_NODShiLtJ_T0090722.1 MGP_NODShiLtJ_G0034138.1 mouse_genomes_project 9 6912648 6961623 + Pgr protein_coding retained_intron MGP_NODShiLtJ_T0090723.1 MGP_NODShiLtJ_G0034138.1 mouse_genomes_project 9 6912697 6981343 + MGP_NODShiLtJ_P0090723 Pgr protein_coding protein_coding MGP_NODShiLtJ_T0005465.1 MGP_NODShiLtJ_G0004608.1 mouse_genomes_project 9 116622318 116648312 - Gm29123 antisense antisense MGP_NODShiLtJ_T0094508.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121941676 121966398 + MGP_NODShiLtJ_P0094508 Ltf protein_coding protein_coding MGP_NODShiLtJ_T0094509.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121941697 121968672 + MGP_NODShiLtJ_P0094509 Ltf protein_coding protein_coding MGP_NODShiLtJ_T0094510.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121941697 121945529 + MGP_NODShiLtJ_P0094510 Ltf protein_coding protein_coding MGP_NODShiLtJ_T0094511.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121941697 121966398 + MGP_NODShiLtJ_P0094511 Ltf protein_coding protein_coding MGP_NODShiLtJ_T0094512.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121941715 121948074 + MGP_NODShiLtJ_P0094512 Ltf protein_coding protein_coding MGP_NODShiLtJ_T0094513.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121945481 121950482 + MGP_NODShiLtJ_P0094513 Ltf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094514.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121947451 121948569 + Ltf protein_coding retained_intron MGP_NODShiLtJ_T0094515.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121950183 121951555 + Ltf protein_coding retained_intron MGP_NODShiLtJ_T0094516.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121950421 121961711 + MGP_NODShiLtJ_P0094516 Ltf protein_coding protein_coding MGP_NODShiLtJ_T0094517.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121956194 121966382 + MGP_NODShiLtJ_P0094517 Ltf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094518.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121961541 121966382 + Ltf protein_coding retained_intron MGP_NODShiLtJ_T0094519.1 MGP_NODShiLtJ_G0035165.1 mouse_genomes_project 9 121964709 121968231 + MGP_NODShiLtJ_P0094519 Ltf protein_coding protein_coding MGP_NODShiLtJ_T0093358.1 MGP_NODShiLtJ_G0034971.1 mouse_genomes_project 9 109210856 109299240 - MGP_NODShiLtJ_P0093358 Armc8 protein_coding protein_coding MGP_NODShiLtJ_T0093359.1 MGP_NODShiLtJ_G0034971.1 mouse_genomes_project 9 109251304 109298990 - MGP_NODShiLtJ_P0093359 Armc8 protein_coding protein_coding MGP_NODShiLtJ_T0093360.1 MGP_NODShiLtJ_G0034971.1 mouse_genomes_project 9 109251309 109298987 - MGP_NODShiLtJ_P0093360 Armc8 protein_coding protein_coding MGP_NODShiLtJ_T0093361.1 MGP_NODShiLtJ_G0034971.1 mouse_genomes_project 9 109286034 109299004 - Armc8 protein_coding retained_intron MGP_NODShiLtJ_T0092444.1 MGP_NODShiLtJ_G0034763.1 mouse_genomes_project 9 70829328 70987595 - MGP_NODShiLtJ_P0092444 Zfp609 protein_coding protein_coding MGP_NODShiLtJ_T0092445.1 MGP_NODShiLtJ_G0034763.1 mouse_genomes_project 9 70842660 70843935 - Zfp609 protein_coding processed_transcript MGP_NODShiLtJ_T0092446.1 MGP_NODShiLtJ_G0034763.1 mouse_genomes_project 9 70948059 70951692 - MGP_NODShiLtJ_P0092446 Zfp609 protein_coding protein_coding MGP_NODShiLtJ_T0094741.1 MGP_NODShiLtJ_G0035227.1 mouse_genomes_project 9 131788096 131804149 - MGP_NODShiLtJ_P0094741 Csrnp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0018350.1 MGP_NODShiLtJ_G0015601.1 mouse_genomes_project 9 43693974 43697337 - Gm16096 processed_transcript processed_transcript MGP_NODShiLtJ_T0018351.1 MGP_NODShiLtJ_G0015601.1 mouse_genomes_project 9 43693980 43696619 - Gm16096 processed_transcript processed_transcript MGP_NODShiLtJ_T0092126.1 MGP_NODShiLtJ_G0034679.1 mouse_genomes_project 9 62322309 62346206 + MGP_NODShiLtJ_P0092126 Sema7a protein_coding protein_coding MGP_NODShiLtJ_T0091410.1 MGP_NODShiLtJ_G0034414.1 mouse_genomes_project 9 41096850 41100656 + MGP_NODShiLtJ_P0091410 Olfr920 protein_coding protein_coding MGP_NODShiLtJ_T0092821.1 MGP_NODShiLtJ_G0034845.1 mouse_genomes_project 9 82417107 82548119 - MGP_NODShiLtJ_P0092821 Hcrtr2 protein_coding protein_coding MGP_NODShiLtJ_T0092822.1 MGP_NODShiLtJ_G0034845.1 mouse_genomes_project 9 82420693 82548364 - MGP_NODShiLtJ_P0092822 Hcrtr2 protein_coding protein_coding MGP_NODShiLtJ_T0092823.1 MGP_NODShiLtJ_G0034845.1 mouse_genomes_project 9 82546184 82547830 - Hcrtr2 protein_coding retained_intron MGP_NODShiLtJ_T0091279.1 MGP_NODShiLtJ_G0034351.1 mouse_genomes_project 9 38451565 38477326 - MGP_NODShiLtJ_P0091279 Gm5615 protein_coding protein_coding MGP_NODShiLtJ_T0093111.1 MGP_NODShiLtJ_G0034910.1 mouse_genomes_project 9 97050966 97059497 + MGP_NODShiLtJ_P0093111 protein_coding protein_coding MGP_NODShiLtJ_T0015975.1 MGP_NODShiLtJ_G0014083.1 mouse_genomes_project 9 89899023 89899352 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099623.1 MGP_NODShiLtJ_G0038017.1 mouse_genomes_project 9 80364515 80364630 + Gm24141 snRNA snRNA MGP_NODShiLtJ_T0093546.1 MGP_NODShiLtJ_G0035008.1 mouse_genomes_project 9 114423702 114475320 - MGP_NODShiLtJ_P0093546 Acpp protein_coding protein_coding MGP_NODShiLtJ_T0093547.1 MGP_NODShiLtJ_G0035008.1 mouse_genomes_project 9 114426435 114436612 - Acpp protein_coding processed_transcript MGP_NODShiLtJ_T0093548.1 MGP_NODShiLtJ_G0035008.1 mouse_genomes_project 9 114434386 114475299 - MGP_NODShiLtJ_P0093548 Acpp protein_coding protein_coding MGP_NODShiLtJ_T0093549.1 MGP_NODShiLtJ_G0035008.1 mouse_genomes_project 9 114442089 114475274 - Acpp protein_coding retained_intron MGP_NODShiLtJ_T0093550.1 MGP_NODShiLtJ_G0035008.1 mouse_genomes_project 9 114456132 114475299 - Acpp protein_coding retained_intron MGP_NODShiLtJ_T0093181.1 MGP_NODShiLtJ_G0034929.1 mouse_genomes_project 9 101241022 101262534 + 1700057G04Rik protein_coding processed_transcript MGP_NODShiLtJ_T0093182.1 MGP_NODShiLtJ_G0034929.1 mouse_genomes_project 9 101241022 101279942 + MGP_NODShiLtJ_P0093182 1700057G04Rik protein_coding protein_coding MGP_NODShiLtJ_T0093183.1 MGP_NODShiLtJ_G0034929.1 mouse_genomes_project 9 101241022 101298542 + MGP_NODShiLtJ_P0093183 1700057G04Rik protein_coding protein_coding MGP_NODShiLtJ_T0093184.1 MGP_NODShiLtJ_G0034929.1 mouse_genomes_project 9 101241053 101287921 + 1700057G04Rik protein_coding processed_transcript MGP_NODShiLtJ_T0093185.1 MGP_NODShiLtJ_G0034929.1 mouse_genomes_project 9 101279763 101298485 + MGP_NODShiLtJ_P0093185 1700057G04Rik protein_coding protein_coding MGP_NODShiLtJ_T0093186.1 MGP_NODShiLtJ_G0034929.1 mouse_genomes_project 9 101287934 101298542 + MGP_NODShiLtJ_P0093186 1700057G04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0002388.1 MGP_NODShiLtJ_G0002297.1 mouse_genomes_project 9 111921196 111923842 - TEC TEC MGP_NODShiLtJ_T0009233.1 MGP_NODShiLtJ_G0007411.1 mouse_genomes_project 9 108379227 108450055 - E330023G01Rik lincRNA lincRNA MGP_NODShiLtJ_T0094183.1 MGP_NODShiLtJ_G0035107.1 mouse_genomes_project 9 119139206 119159690 - MGP_NODShiLtJ_P0094183 P4htm protein_coding protein_coding MGP_NODShiLtJ_T0094184.1 MGP_NODShiLtJ_G0035107.1 mouse_genomes_project 9 119139523 119139902 - P4htm protein_coding processed_transcript MGP_NODShiLtJ_T0094185.1 MGP_NODShiLtJ_G0035107.1 mouse_genomes_project 9 119140933 119143288 - P4htm protein_coding retained_intron MGP_NODShiLtJ_T0094186.1 MGP_NODShiLtJ_G0035107.1 mouse_genomes_project 9 119141902 119159599 - P4htm protein_coding retained_intron MGP_NODShiLtJ_T0094187.1 MGP_NODShiLtJ_G0035107.1 mouse_genomes_project 9 119143342 119159603 - MGP_NODShiLtJ_P0094187 P4htm protein_coding protein_coding MGP_NODShiLtJ_T0094188.1 MGP_NODShiLtJ_G0035107.1 mouse_genomes_project 9 119143342 119159369 - MGP_NODShiLtJ_P0094188 P4htm protein_coding protein_coding MGP_NODShiLtJ_T0091107.1 MGP_NODShiLtJ_G0034298.1 mouse_genomes_project 9 27672600 27700217 + MGP_NODShiLtJ_P0091107 B3gat1 protein_coding protein_coding MGP_NODShiLtJ_T0091108.1 MGP_NODShiLtJ_G0034298.1 mouse_genomes_project 9 27672675 27694958 + MGP_NODShiLtJ_P0091108 B3gat1 protein_coding protein_coding MGP_NODShiLtJ_T0091109.1 MGP_NODShiLtJ_G0034298.1 mouse_genomes_project 9 27672696 27701961 + MGP_NODShiLtJ_P0091109 B3gat1 protein_coding protein_coding MGP_NODShiLtJ_T0091110.1 MGP_NODShiLtJ_G0034298.1 mouse_genomes_project 9 27672723 27696861 + MGP_NODShiLtJ_P0091110 B3gat1 protein_coding protein_coding MGP_NODShiLtJ_T0091111.1 MGP_NODShiLtJ_G0034298.1 mouse_genomes_project 9 27690440 27700205 + MGP_NODShiLtJ_P0091111 B3gat1 protein_coding protein_coding MGP_NODShiLtJ_T0091112.1 MGP_NODShiLtJ_G0034298.1 mouse_genomes_project 9 27694162 27701967 + MGP_NODShiLtJ_P0091112 B3gat1 protein_coding protein_coding MGP_NODShiLtJ_T0091585.1 MGP_NODShiLtJ_G0034498.1 mouse_genomes_project 9 47493847 47506483 - MGP_NODShiLtJ_P0091585 Hinfp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090921.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20857320 20861222 + Ubl5 protein_coding retained_intron MGP_NODShiLtJ_T0090922.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20857760 20861411 + MGP_NODShiLtJ_P0090922 Ubl5 protein_coding protein_coding MGP_NODShiLtJ_T0090923.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20858513 20861224 + MGP_NODShiLtJ_P0090923 Ubl5 protein_coding protein_coding MGP_NODShiLtJ_T0090924.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20858782 20860096 + MGP_NODShiLtJ_P0090924 Ubl5 protein_coding protein_coding MGP_NODShiLtJ_T0090925.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20859267 20861222 + MGP_NODShiLtJ_P0090925 Ubl5 protein_coding protein_coding MGP_NODShiLtJ_T0090926.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20859280 20860353 + Ubl5 protein_coding retained_intron MGP_NODShiLtJ_T0090927.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20859280 20861587 + MGP_NODShiLtJ_P0090927 Ubl5 protein_coding protein_coding MGP_NODShiLtJ_T0090928.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20859281 20861222 + MGP_NODShiLtJ_P0090928 Ubl5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090929.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20859314 20861216 + MGP_NODShiLtJ_P0090929 Ubl5 protein_coding protein_coding MGP_NODShiLtJ_T0090930.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20859487 20861222 + MGP_NODShiLtJ_P0090930 Ubl5 protein_coding protein_coding MGP_NODShiLtJ_T0090931.1 MGP_NODShiLtJ_G0034222.1 mouse_genomes_project 9 20859664 20861223 + MGP_NODShiLtJ_P0090931 Ubl5 protein_coding protein_coding MGP_NODShiLtJ_T0005487.1 MGP_NODShiLtJ_G0004625.1 mouse_genomes_project 9 120804141 120808669 - Gm43732 antisense antisense MGP_NODShiLtJ_T0090933.1 MGP_NODShiLtJ_G0034224.1 mouse_genomes_project 9 20887086 20948826 - MGP_NODShiLtJ_P0090933 Olfm2 protein_coding protein_coding MGP_NODShiLtJ_T0090934.1 MGP_NODShiLtJ_G0034224.1 mouse_genomes_project 9 20887207 20947390 - MGP_NODShiLtJ_P0090934 Olfm2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091772.1 MGP_NODShiLtJ_G0034556.1 mouse_genomes_project 9 51844430 51874126 - MGP_NODShiLtJ_P0091772 Nxpe2 protein_coding protein_coding MGP_NODShiLtJ_T0091773.1 MGP_NODShiLtJ_G0034556.1 mouse_genomes_project 9 51845568 51874062 - MGP_NODShiLtJ_P0091773 Nxpe2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091774.1 MGP_NODShiLtJ_G0034556.1 mouse_genomes_project 9 51854012 51886681 - MGP_NODShiLtJ_P0091774 Nxpe2 protein_coding protein_coding MGP_NODShiLtJ_T0091775.1 MGP_NODShiLtJ_G0034556.1 mouse_genomes_project 9 51859967 51874082 - Nxpe2 protein_coding processed_transcript MGP_NODShiLtJ_T0091776.1 MGP_NODShiLtJ_G0034556.1 mouse_genomes_project 9 51860295 51886681 - Nxpe2 protein_coding processed_transcript MGP_NODShiLtJ_T0015938.1 MGP_NODShiLtJ_G0014046.1 mouse_genomes_project 9 70360014 70360402 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090957.1 MGP_NODShiLtJ_G0034237.1 mouse_genomes_project 9 21308128 21313625 - MGP_NODShiLtJ_P0090957 Zglp1 protein_coding protein_coding MGP_NODShiLtJ_T0002370.1 MGP_NODShiLtJ_G0002279.1 mouse_genomes_project 9 105652515 105656649 + TEC TEC MGP_NODShiLtJ_T0018422.1 MGP_NODShiLtJ_G0015626.1 mouse_genomes_project 9 118630321 118636336 + 4930447F24Rik processed_transcript antisense MGP_NODShiLtJ_T0018423.1 MGP_NODShiLtJ_G0015626.1 mouse_genomes_project 9 118635286 118636999 + 4930447F24Rik processed_transcript antisense MGP_NODShiLtJ_T0018424.1 MGP_NODShiLtJ_G0015626.1 mouse_genomes_project 9 118635759 118636147 + 4930447F24Rik processed_transcript retained_intron MGP_NODShiLtJ_T0015985.1 MGP_NODShiLtJ_G0014093.1 mouse_genomes_project 9 96150499 96151087 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094295.1 MGP_NODShiLtJ_G0035123.1 mouse_genomes_project 9 119610035 119624414 - MGP_NODShiLtJ_P0094295 Atrip protein_coding protein_coding MGP_NODShiLtJ_T0094296.1 MGP_NODShiLtJ_G0035123.1 mouse_genomes_project 9 119610073 119624342 - MGP_NODShiLtJ_P0094296 Atrip protein_coding protein_coding MGP_NODShiLtJ_T0094297.1 MGP_NODShiLtJ_G0035123.1 mouse_genomes_project 9 119610098 119612564 - Atrip protein_coding retained_intron MGP_NODShiLtJ_T0094298.1 MGP_NODShiLtJ_G0035123.1 mouse_genomes_project 9 119610949 119615668 - MGP_NODShiLtJ_P0094298 Atrip protein_coding protein_coding MGP_NODShiLtJ_T0094299.1 MGP_NODShiLtJ_G0035123.1 mouse_genomes_project 9 119617750 119619804 - Atrip protein_coding retained_intron MGP_NODShiLtJ_T0094300.1 MGP_NODShiLtJ_G0035123.1 mouse_genomes_project 9 119622028 119624356 - Atrip protein_coding retained_intron MGP_NODShiLtJ_T0091799.1 MGP_NODShiLtJ_G0034569.1 mouse_genomes_project 9 52885065 52895275 + MGP_NODShiLtJ_P0091799 Gm4894 protein_coding protein_coding MGP_NODShiLtJ_T0099638.1 MGP_NODShiLtJ_G0038032.1 mouse_genomes_project 9 115922720 115922807 - Gm22720 snRNA snRNA MGP_NODShiLtJ_T0091999.1 MGP_NODShiLtJ_G0034637.1 mouse_genomes_project 9 59264063 59281661 + MGP_NODShiLtJ_P0091999 Fbxo22 protein_coding protein_coding MGP_NODShiLtJ_T0092000.1 MGP_NODShiLtJ_G0034637.1 mouse_genomes_project 9 59268801 59278257 + MGP_NODShiLtJ_P0092000 Fbxo22 protein_coding protein_coding MGP_NODShiLtJ_T0016038.1 MGP_NODShiLtJ_G0014146.1 mouse_genomes_project 9 116415994 116416607 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002394.1 MGP_NODShiLtJ_G0002303.1 mouse_genomes_project 9 113201984 113204458 + TEC TEC MGP_NODShiLtJ_T0010950.1 MGP_NODShiLtJ_G0009083.1 mouse_genomes_project 9 45956572 45956651 - Gm27509 miRNA miRNA MGP_NODShiLtJ_T0092506.1 MGP_NODShiLtJ_G0034775.1 mouse_genomes_project 9 71968083 72022046 + MGP_NODShiLtJ_P0092506 Car12 protein_coding protein_coding MGP_NODShiLtJ_T0092507.1 MGP_NODShiLtJ_G0034775.1 mouse_genomes_project 9 71968124 72009673 + Car12 protein_coding retained_intron MGP_NODShiLtJ_T0092508.1 MGP_NODShiLtJ_G0034775.1 mouse_genomes_project 9 71968125 72003125 + Car12 protein_coding retained_intron MGP_NODShiLtJ_T0092509.1 MGP_NODShiLtJ_G0034775.1 mouse_genomes_project 9 71968127 72022043 + MGP_NODShiLtJ_P0092509 Car12 protein_coding protein_coding MGP_NODShiLtJ_T0092510.1 MGP_NODShiLtJ_G0034775.1 mouse_genomes_project 9 72002956 72019518 + MGP_NODShiLtJ_P0092510 Car12 protein_coding protein_coding MGP_NODShiLtJ_T0092604.1 MGP_NODShiLtJ_G0034797.1 mouse_genomes_project 9 75971243 76011197 - MGP_NODShiLtJ_P0092604 Rnf111 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092605.1 MGP_NODShiLtJ_G0034797.1 mouse_genomes_project 9 75971250 76054202 - MGP_NODShiLtJ_P0092605 Rnf111 protein_coding protein_coding MGP_NODShiLtJ_T0092606.1 MGP_NODShiLtJ_G0034797.1 mouse_genomes_project 9 75971251 76053831 - MGP_NODShiLtJ_P0092606 Rnf111 protein_coding protein_coding MGP_NODShiLtJ_T0091692.1 MGP_NODShiLtJ_G0034536.1 mouse_genomes_project 9 48675584 48701552 + MGP_NODShiLtJ_P0091692 Fxyd6 protein_coding protein_coding MGP_NODShiLtJ_T0094614.1 MGP_NODShiLtJ_G0035182.1 mouse_genomes_project 9 125644049 125644493 + MGP_NODShiLtJ_P0094614 Bcl2a1c protein_coding protein_coding MGP_NODShiLtJ_T0091132.1 MGP_NODShiLtJ_G0034306.1 mouse_genomes_project 9 28071102 28132891 - MGP_NODShiLtJ_P0091132 Jam3 protein_coding protein_coding MGP_NODShiLtJ_T0091133.1 MGP_NODShiLtJ_G0034306.1 mouse_genomes_project 9 28074385 28132888 - MGP_NODShiLtJ_P0091133 Jam3 protein_coding protein_coding MGP_NODShiLtJ_T0091486.1 MGP_NODShiLtJ_G0034467.1 mouse_genomes_project 9 43585139 43669892 + Clmp protein_coding processed_transcript MGP_NODShiLtJ_T0091487.1 MGP_NODShiLtJ_G0034467.1 mouse_genomes_project 9 43585190 43698471 + MGP_NODShiLtJ_P0091487 Clmp protein_coding protein_coding MGP_NODShiLtJ_T0091488.1 MGP_NODShiLtJ_G0034467.1 mouse_genomes_project 9 43585213 43670015 + Clmp protein_coding retained_intron MGP_NODShiLtJ_T0091489.1 MGP_NODShiLtJ_G0034467.1 mouse_genomes_project 9 43684228 43695635 + Clmp protein_coding processed_transcript MGP_NODShiLtJ_T0091700.1 MGP_NODShiLtJ_G0034540.1 mouse_genomes_project 9 49163262 49190805 + MGP_NODShiLtJ_P0091700 Bace1 protein_coding protein_coding MGP_NODShiLtJ_T0091701.1 MGP_NODShiLtJ_G0034540.1 mouse_genomes_project 9 49163262 49188912 + MGP_NODShiLtJ_P0091701 Bace1 protein_coding protein_coding MGP_NODShiLtJ_T0091702.1 MGP_NODShiLtJ_G0034540.1 mouse_genomes_project 9 49163922 49183603 + MGP_NODShiLtJ_P0091702 Bace1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091703.1 MGP_NODShiLtJ_G0034540.1 mouse_genomes_project 9 49164602 49181145 + Bace1 protein_coding processed_transcript MGP_NODShiLtJ_T0091704.1 MGP_NODShiLtJ_G0034540.1 mouse_genomes_project 9 49179160 49188647 + Bace1 protein_coding retained_intron MGP_NODShiLtJ_T0091705.1 MGP_NODShiLtJ_G0034540.1 mouse_genomes_project 9 49181064 49186790 + MGP_NODShiLtJ_P0091705 Bace1 protein_coding protein_coding MGP_NODShiLtJ_T0091444.1 MGP_NODShiLtJ_G0034442.1 mouse_genomes_project 9 42394695 42395725 - MGP_NODShiLtJ_P0091444 Olfr149 protein_coding protein_coding MGP_NODShiLtJ_T0100890.1 MGP_NODShiLtJ_G0039284.1 mouse_genomes_project 9 69116489 69116557 + Gm23344 snoRNA snoRNA MGP_NODShiLtJ_T0094721.1 MGP_NODShiLtJ_G0035218.1 mouse_genomes_project 9 131187632 131219700 + MGP_NODShiLtJ_P0094721 Acvr2b protein_coding protein_coding MGP_NODShiLtJ_T0094722.1 MGP_NODShiLtJ_G0035218.1 mouse_genomes_project 9 131187689 131219700 + MGP_NODShiLtJ_P0094722 Acvr2b protein_coding protein_coding MGP_NODShiLtJ_T0094723.1 MGP_NODShiLtJ_G0035218.1 mouse_genomes_project 9 131187734 131219660 + MGP_NODShiLtJ_P0094723 Acvr2b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091284.1 MGP_NODShiLtJ_G0034354.1 mouse_genomes_project 9 38617316 38622957 + MGP_NODShiLtJ_P0091284 Acrv1 protein_coding protein_coding MGP_NODShiLtJ_T0091285.1 MGP_NODShiLtJ_G0034354.1 mouse_genomes_project 9 38617350 38621465 + Acrv1 protein_coding retained_intron MGP_NODShiLtJ_T0090774.1 MGP_NODShiLtJ_G0034154.1 mouse_genomes_project 9 13642482 13651970 - MGP_NODShiLtJ_P0090774 Piwil4 protein_coding protein_coding MGP_NODShiLtJ_T0090775.1 MGP_NODShiLtJ_G0034154.1 mouse_genomes_project 9 13648677 13688318 - MGP_NODShiLtJ_P0090775 Piwil4 protein_coding protein_coding MGP_NODShiLtJ_T0090776.1 MGP_NODShiLtJ_G0034154.1 mouse_genomes_project 9 13648678 13666091 - MGP_NODShiLtJ_P0090776 Piwil4 protein_coding protein_coding MGP_NODShiLtJ_T0090777.1 MGP_NODShiLtJ_G0034154.1 mouse_genomes_project 9 13649257 13688330 - MGP_NODShiLtJ_P0090777 Piwil4 protein_coding protein_coding MGP_NODShiLtJ_T0091194.1 MGP_NODShiLtJ_G0034324.1 mouse_genomes_project 9 33850085 33971208 - MGP_NODShiLtJ_P0091194 Fli1 protein_coding protein_coding MGP_NODShiLtJ_T0091195.1 MGP_NODShiLtJ_G0034324.1 mouse_genomes_project 9 33855905 33972478 - MGP_NODShiLtJ_P0091195 Fli1 protein_coding protein_coding MGP_NODShiLtJ_T0094916.1 MGP_NODShiLtJ_G0035285.1 mouse_genomes_project 9 136107609 136128459 - MGP_NODShiLtJ_P0094916 Ccr1 protein_coding protein_coding MGP_NODShiLtJ_T0090667.1 MGP_NODShiLtJ_G0034118.1 mouse_genomes_project 9 4719246 5012282 - MGP_NODShiLtJ_P0090667 Dync2h1 protein_coding protein_coding MGP_NODShiLtJ_T0090668.1 MGP_NODShiLtJ_G0034118.1 mouse_genomes_project 9 4719246 5003498 - MGP_NODShiLtJ_P0090668 Dync2h1 protein_coding protein_coding MGP_NODShiLtJ_T0090669.1 MGP_NODShiLtJ_G0034118.1 mouse_genomes_project 9 4720047 5003409 - MGP_NODShiLtJ_P0090669 Dync2h1 protein_coding protein_coding MGP_NODShiLtJ_T0090670.1 MGP_NODShiLtJ_G0034118.1 mouse_genomes_project 9 4720208 5003409 - MGP_NODShiLtJ_P0090670 Dync2h1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090671.1 MGP_NODShiLtJ_G0034118.1 mouse_genomes_project 9 4741207 4753471 - Dync2h1 protein_coding retained_intron MGP_NODShiLtJ_T0090672.1 MGP_NODShiLtJ_G0034118.1 mouse_genomes_project 9 4839801 4926026 - MGP_NODShiLtJ_P0090672 Dync2h1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090673.1 MGP_NODShiLtJ_G0034118.1 mouse_genomes_project 9 4963848 5003496 - Dync2h1 protein_coding retained_intron MGP_NODShiLtJ_T0090674.1 MGP_NODShiLtJ_G0034118.1 mouse_genomes_project 9 4972012 5003417 - MGP_NODShiLtJ_P0090674 Dync2h1 protein_coding protein_coding MGP_NODShiLtJ_T0092999.1 MGP_NODShiLtJ_G0034886.1 mouse_genomes_project 9 91366523 91406231 + Ttk protein_coding retained_intron MGP_NODShiLtJ_T0093000.1 MGP_NODShiLtJ_G0034886.1 mouse_genomes_project 9 91366524 91409922 + MGP_NODShiLtJ_P0093000 Ttk protein_coding protein_coding MGP_NODShiLtJ_T0093001.1 MGP_NODShiLtJ_G0034886.1 mouse_genomes_project 9 91366552 91409919 + MGP_NODShiLtJ_P0093001 Ttk protein_coding protein_coding MGP_NODShiLtJ_T0093002.1 MGP_NODShiLtJ_G0034886.1 mouse_genomes_project 9 91366568 91369369 + Ttk protein_coding retained_intron MGP_NODShiLtJ_T0093003.1 MGP_NODShiLtJ_G0034886.1 mouse_genomes_project 9 91366575 91376304 + Ttk protein_coding processed_transcript MGP_NODShiLtJ_T0093004.1 MGP_NODShiLtJ_G0034886.1 mouse_genomes_project 9 91366600 91374968 + MGP_NODShiLtJ_P0093004 Ttk protein_coding protein_coding MGP_NODShiLtJ_T0093005.1 MGP_NODShiLtJ_G0034886.1 mouse_genomes_project 9 91367623 91409601 + MGP_NODShiLtJ_P0093005 Ttk protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091610.1 MGP_NODShiLtJ_G0034514.1 mouse_genomes_project 9 47928174 47941255 + MGP_NODShiLtJ_P0091610 Treh protein_coding protein_coding MGP_NODShiLtJ_T0091611.1 MGP_NODShiLtJ_G0034514.1 mouse_genomes_project 9 47928176 47941254 + MGP_NODShiLtJ_P0091611 Treh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091612.1 MGP_NODShiLtJ_G0034514.1 mouse_genomes_project 9 47928190 47941255 + MGP_NODShiLtJ_P0091612 Treh protein_coding protein_coding MGP_NODShiLtJ_T0091613.1 MGP_NODShiLtJ_G0034514.1 mouse_genomes_project 9 47938245 47940966 + MGP_NODShiLtJ_P0091613 Treh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090686.1 MGP_NODShiLtJ_G0034124.1 mouse_genomes_project 9 5310277 5346688 + MGP_NODShiLtJ_P0090686 protein_coding protein_coding MGP_NODShiLtJ_T0015940.1 MGP_NODShiLtJ_G0014048.1 mouse_genomes_project 9 77476627 77476889 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010945.1 MGP_NODShiLtJ_G0009078.1 mouse_genomes_project 9 41530334 41530418 + Gm25032 miRNA miRNA MGP_NODShiLtJ_T0090822.1 MGP_NODShiLtJ_G0034168.1 mouse_genomes_project 9 14503244 14543502 + MGP_NODShiLtJ_P0090822 Smco4 protein_coding protein_coding MGP_NODShiLtJ_T0090823.1 MGP_NODShiLtJ_G0034168.1 mouse_genomes_project 9 14519085 14543499 + MGP_NODShiLtJ_P0090823 Smco4 protein_coding protein_coding MGP_NODShiLtJ_T0093717.1 MGP_NODShiLtJ_G0035040.1 mouse_genomes_project 9 116976772 116981817 - MGP_NODShiLtJ_P0093717 Grm2 protein_coding protein_coding MGP_NODShiLtJ_T0093718.1 MGP_NODShiLtJ_G0035040.1 mouse_genomes_project 9 116976794 116989718 - MGP_NODShiLtJ_P0093718 Grm2 protein_coding protein_coding MGP_NODShiLtJ_T0093719.1 MGP_NODShiLtJ_G0035040.1 mouse_genomes_project 9 116978568 116989720 - MGP_NODShiLtJ_P0093719 Grm2 protein_coding protein_coding MGP_NODShiLtJ_T0093720.1 MGP_NODShiLtJ_G0035040.1 mouse_genomes_project 9 116978667 116980303 - Grm2 protein_coding processed_transcript MGP_NODShiLtJ_T0002329.1 MGP_NODShiLtJ_G0002239.1 mouse_genomes_project 9 78486709 78490211 + TEC TEC MGP_NODShiLtJ_T0091430.1 MGP_NODShiLtJ_G0034434.1 mouse_genomes_project 9 42143404 42144340 - MGP_NODShiLtJ_P0091430 Olfr957 protein_coding protein_coding MGP_NODShiLtJ_T0091825.1 MGP_NODShiLtJ_G0034582.1 mouse_genomes_project 9 54302605 54309516 + MGP_NODShiLtJ_P0091825 Pih1d2 protein_coding protein_coding MGP_NODShiLtJ_T0091826.1 MGP_NODShiLtJ_G0034582.1 mouse_genomes_project 9 54302617 54307814 + Pih1d2 protein_coding retained_intron MGP_NODShiLtJ_T0091827.1 MGP_NODShiLtJ_G0034582.1 mouse_genomes_project 9 54302621 54307063 + MGP_NODShiLtJ_P0091827 Pih1d2 protein_coding protein_coding MGP_NODShiLtJ_T0091828.1 MGP_NODShiLtJ_G0034582.1 mouse_genomes_project 9 54302667 54309519 + MGP_NODShiLtJ_P0091828 Pih1d2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091829.1 MGP_NODShiLtJ_G0034582.1 mouse_genomes_project 9 54302805 54304102 + Pih1d2 protein_coding retained_intron MGP_NODShiLtJ_T0091830.1 MGP_NODShiLtJ_G0034582.1 mouse_genomes_project 9 54302834 54306475 + MGP_NODShiLtJ_P0091830 Pih1d2 protein_coding protein_coding MGP_NODShiLtJ_T0091831.1 MGP_NODShiLtJ_G0034582.1 mouse_genomes_project 9 54303291 54306350 + MGP_NODShiLtJ_P0091831 Pih1d2 protein_coding protein_coding MGP_NODShiLtJ_T0090960.1 MGP_NODShiLtJ_G0034240.1 mouse_genomes_project 9 21351497 21380930 - MGP_NODShiLtJ_P0090960 Tyk2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090961.1 MGP_NODShiLtJ_G0034240.1 mouse_genomes_project 9 21351502 21376019 - MGP_NODShiLtJ_P0090961 Tyk2 protein_coding protein_coding MGP_NODShiLtJ_T0016013.1 MGP_NODShiLtJ_G0014121.1 mouse_genomes_project 9 106031140 106031834 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094640.1 MGP_NODShiLtJ_G0035196.1 mouse_genomes_project 9 126685978 126758027 - MGP_NODShiLtJ_P0094640 Stt3b protein_coding protein_coding MGP_NODShiLtJ_T0093240.1 MGP_NODShiLtJ_G0034942.1 mouse_genomes_project 9 105543421 105609820 + MGP_NODShiLtJ_P0093240 Gk5 protein_coding protein_coding MGP_NODShiLtJ_T0093241.1 MGP_NODShiLtJ_G0034942.1 mouse_genomes_project 9 105543434 105614238 + MGP_NODShiLtJ_P0093241 Gk5 protein_coding protein_coding MGP_NODShiLtJ_T0093242.1 MGP_NODShiLtJ_G0034942.1 mouse_genomes_project 9 105543491 105612440 + MGP_NODShiLtJ_P0093242 Gk5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093243.1 MGP_NODShiLtJ_G0034942.1 mouse_genomes_project 9 105548618 105562003 + Gk5 protein_coding processed_transcript MGP_NODShiLtJ_T0093244.1 MGP_NODShiLtJ_G0034942.1 mouse_genomes_project 9 105600547 105603097 + Gk5 protein_coding retained_intron MGP_NODShiLtJ_T0091286.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38632587 38654124 - MGP_NODShiLtJ_P0091286 Chek1 protein_coding protein_coding MGP_NODShiLtJ_T0091287.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38632587 38654408 - MGP_NODShiLtJ_P0091287 Chek1 protein_coding protein_coding MGP_NODShiLtJ_T0091288.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38633523 38654335 - MGP_NODShiLtJ_P0091288 Chek1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091289.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38634241 38653618 - MGP_NODShiLtJ_P0091289 Chek1 protein_coding protein_coding MGP_NODShiLtJ_T0091290.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38634241 38653618 - MGP_NODShiLtJ_P0091290 Chek1 protein_coding protein_coding MGP_NODShiLtJ_T0091291.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38640643 38650488 - Chek1 protein_coding retained_intron MGP_NODShiLtJ_T0091292.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38650391 38654814 - Chek1 protein_coding processed_transcript MGP_NODShiLtJ_T0091293.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38651345 38654320 - Chek1 protein_coding retained_intron MGP_NODShiLtJ_T0091294.1 MGP_NODShiLtJ_G0034355.1 mouse_genomes_project 9 38651604 38654201 - MGP_NODShiLtJ_P0091294 Chek1 protein_coding protein_coding MGP_NODShiLtJ_T0093178.1 MGP_NODShiLtJ_G0034928.1 mouse_genomes_project 9 101205796 101228646 + MGP_NODShiLtJ_P0093178 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093179.1 MGP_NODShiLtJ_G0034928.1 mouse_genomes_project 9 101205827 101212274 + MGP_NODShiLtJ_P0093179 protein_coding protein_coding MGP_NODShiLtJ_T0093180.1 MGP_NODShiLtJ_G0034928.1 mouse_genomes_project 9 101220721 101223051 + protein_coding retained_intron MGP_NODShiLtJ_T0015956.1 MGP_NODShiLtJ_G0014064.1 mouse_genomes_project 9 80727904 80728211 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094039.1 MGP_NODShiLtJ_G0035085.1 mouse_genomes_project 9 118579356 118588487 - MGP_NODShiLtJ_P0094039 Apeh protein_coding protein_coding MGP_NODShiLtJ_T0094040.1 MGP_NODShiLtJ_G0035085.1 mouse_genomes_project 9 118579366 118579981 - Apeh protein_coding retained_intron MGP_NODShiLtJ_T0094041.1 MGP_NODShiLtJ_G0035085.1 mouse_genomes_project 9 118579366 118588419 - Apeh protein_coding retained_intron MGP_NODShiLtJ_T0094042.1 MGP_NODShiLtJ_G0035085.1 mouse_genomes_project 9 118579866 118580421 - Apeh protein_coding retained_intron MGP_NODShiLtJ_T0094043.1 MGP_NODShiLtJ_G0035085.1 mouse_genomes_project 9 118580100 118582473 - Apeh protein_coding retained_intron MGP_NODShiLtJ_T0094044.1 MGP_NODShiLtJ_G0035085.1 mouse_genomes_project 9 118580728 118588429 - Apeh protein_coding retained_intron MGP_NODShiLtJ_T0094045.1 MGP_NODShiLtJ_G0035085.1 mouse_genomes_project 9 118586296 118587973 - Apeh protein_coding retained_intron MGP_NODShiLtJ_T0094046.1 MGP_NODShiLtJ_G0035085.1 mouse_genomes_project 9 118586575 118588432 - MGP_NODShiLtJ_P0094046 Apeh protein_coding protein_coding MGP_NODShiLtJ_T0091263.1 MGP_NODShiLtJ_G0034339.1 mouse_genomes_project 9 37268621 37285064 - MGP_NODShiLtJ_P0091263 Pate4 protein_coding protein_coding MGP_NODShiLtJ_T0011628.1 MGP_NODShiLtJ_G0009761.1 mouse_genomes_project 9 66795614 66795707 + Gm23221 misc_RNA misc_RNA MGP_NODShiLtJ_T0100871.1 MGP_NODShiLtJ_G0039265.1 mouse_genomes_project 9 24970378 24970473 + Gm22380 snoRNA snoRNA MGP_NODShiLtJ_T0094523.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122055613 122139842 + MGP_NODShiLtJ_P0094523 Lrrfip2 protein_coding protein_coding MGP_NODShiLtJ_T0094524.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122056076 122165666 + MGP_NODShiLtJ_P0094524 Lrrfip2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094525.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122056132 122165664 + MGP_NODShiLtJ_P0094525 Lrrfip2 protein_coding protein_coding MGP_NODShiLtJ_T0094526.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122056134 122164218 + MGP_NODShiLtJ_P0094526 Lrrfip2 protein_coding protein_coding MGP_NODShiLtJ_T0094527.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122056156 122165664 + MGP_NODShiLtJ_P0094527 Lrrfip2 protein_coding protein_coding MGP_NODShiLtJ_T0094528.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122056466 122164218 + MGP_NODShiLtJ_P0094528 Lrrfip2 protein_coding protein_coding MGP_NODShiLtJ_T0094529.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122058506 122164218 + MGP_NODShiLtJ_P0094529 Lrrfip2 protein_coding protein_coding MGP_NODShiLtJ_T0094531.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122124321 122154195 + MGP_NODShiLtJ_P0094531 Lrrfip2 protein_coding protein_coding MGP_NODShiLtJ_T0094532.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122132229 122165664 + Lrrfip2 protein_coding processed_transcript MGP_NODShiLtJ_T0094533.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122139521 122145915 + Lrrfip2 protein_coding retained_intron MGP_NODShiLtJ_T0094534.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122154188 122156505 + Lrrfip2 protein_coding retained_intron MGP_NODShiLtJ_T0094535.1 MGP_NODShiLtJ_G0035167.1 mouse_genomes_project 9 122159165 122163949 + Lrrfip2 protein_coding retained_intron MGP_NODShiLtJ_T0097849.1 MGP_NODShiLtJ_G0036261.1 mouse_genomes_project 9 40333397 40334324 + pseudogene pseudogene MGP_NODShiLtJ_T0002328.1 MGP_NODShiLtJ_G0002238.1 mouse_genomes_project 9 78482383 78483876 + TEC TEC MGP_NODShiLtJ_T0093187.1 MGP_NODShiLtJ_G0034930.1 mouse_genomes_project 9 101423188 101460362 + MGP_NODShiLtJ_P0093187 Plscr4 protein_coding protein_coding MGP_NODShiLtJ_T0093188.1 MGP_NODShiLtJ_G0034930.1 mouse_genomes_project 9 101423209 101453255 + Plscr4 protein_coding retained_intron MGP_NODShiLtJ_T0018405.1 MGP_NODShiLtJ_G0015620.1 mouse_genomes_project 9 106269227 106278356 + C430002N11Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018406.1 MGP_NODShiLtJ_G0015620.1 mouse_genomes_project 9 106269240 106279151 + C430002N11Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018407.1 MGP_NODShiLtJ_G0015620.1 mouse_genomes_project 9 106269240 106287662 + C430002N11Rik processed_transcript lincRNA MGP_NODShiLtJ_T0018408.1 MGP_NODShiLtJ_G0015620.1 mouse_genomes_project 9 106269250 106278368 + C430002N11Rik processed_transcript retained_intron MGP_NODShiLtJ_T0018409.1 MGP_NODShiLtJ_G0015620.1 mouse_genomes_project 9 106269266 106278047 + C430002N11Rik processed_transcript lincRNA MGP_NODShiLtJ_T0100879.1 MGP_NODShiLtJ_G0039273.1 mouse_genomes_project 9 42177776 42177903 - Gm24278 snoRNA snoRNA MGP_NODShiLtJ_T0093626.1 MGP_NODShiLtJ_G0035021.1 mouse_genomes_project 9 116468668 116492537 + MGP_NODShiLtJ_P0093626 Wdr82 protein_coding protein_coding MGP_NODShiLtJ_T0093627.1 MGP_NODShiLtJ_G0035021.1 mouse_genomes_project 9 116468669 116473267 + Wdr82 protein_coding retained_intron MGP_NODShiLtJ_T0093628.1 MGP_NODShiLtJ_G0035021.1 mouse_genomes_project 9 116475930 116487918 + MGP_NODShiLtJ_P0093628 Wdr82 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090707.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5853464 5936868 - MGP_NODShiLtJ_P0090707 Yap1 protein_coding protein_coding MGP_NODShiLtJ_T0090708.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5853464 5936876 - MGP_NODShiLtJ_P0090708 Yap1 protein_coding protein_coding MGP_NODShiLtJ_T0090709.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5855962 5936670 - MGP_NODShiLtJ_P0090709 Yap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090710.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5855962 5936670 - MGP_NODShiLtJ_P0090710 Yap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090711.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5855962 5933983 - MGP_NODShiLtJ_P0090711 Yap1 protein_coding protein_coding MGP_NODShiLtJ_T0090712.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5855962 5936670 - MGP_NODShiLtJ_P0090712 Yap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090713.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5891281 5894795 - Yap1 protein_coding processed_transcript MGP_NODShiLtJ_T0090714.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5902769 5936037 - Yap1 protein_coding processed_transcript MGP_NODShiLtJ_T0090715.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5902811 5936055 - Yap1 protein_coding processed_transcript MGP_NODShiLtJ_T0090716.1 MGP_NODShiLtJ_G0034133.1 mouse_genomes_project 9 5929187 5936876 - Yap1 protein_coding retained_intron MGP_NODShiLtJ_T0015973.1 MGP_NODShiLtJ_G0014081.1 mouse_genomes_project 9 88015086 88015955 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090954.1 MGP_NODShiLtJ_G0034234.1 mouse_genomes_project 9 21255450 21271231 + MGP_NODShiLtJ_P0090954 Icam1 protein_coding protein_coding MGP_NODShiLtJ_T0005457.1 MGP_NODShiLtJ_G0004602.1 mouse_genomes_project 9 113574468 113596140 + Gm16252 antisense antisense MGP_NODShiLtJ_T0094170.1 MGP_NODShiLtJ_G0035104.1 mouse_genomes_project 9 119126226 119127260 - Ndufaf3 protein_coding retained_intron MGP_NODShiLtJ_T0094171.1 MGP_NODShiLtJ_G0035104.1 mouse_genomes_project 9 119126308 119127277 - MGP_NODShiLtJ_P0094171 Ndufaf3 protein_coding protein_coding MGP_NODShiLtJ_T0094172.1 MGP_NODShiLtJ_G0035104.1 mouse_genomes_project 9 119126526 119127280 - Ndufaf3 protein_coding retained_intron MGP_NODShiLtJ_T0093023.1 MGP_NODShiLtJ_G0034891.1 mouse_genomes_project 9 94244346 94421256 - MGP_NODShiLtJ_P0093023 Ube2cbp protein_coding protein_coding MGP_NODShiLtJ_T0093024.1 MGP_NODShiLtJ_G0034891.1 mouse_genomes_project 9 94244782 94421256 - MGP_NODShiLtJ_P0093024 Ube2cbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093087.1 MGP_NODShiLtJ_G0034904.1 mouse_genomes_project 9 96502572 96571903 - MGP_NODShiLtJ_P0093087 Snx14 protein_coding protein_coding MGP_NODShiLtJ_T0093088.1 MGP_NODShiLtJ_G0034904.1 mouse_genomes_project 9 96502574 96525825 - Snx14 protein_coding retained_intron MGP_NODShiLtJ_T0093089.1 MGP_NODShiLtJ_G0034904.1 mouse_genomes_project 9 96502574 96571850 - MGP_NODShiLtJ_P0093089 Snx14 protein_coding protein_coding MGP_NODShiLtJ_T0093090.1 MGP_NODShiLtJ_G0034904.1 mouse_genomes_project 9 96502586 96571910 - MGP_NODShiLtJ_P0093090 Snx14 protein_coding protein_coding MGP_NODShiLtJ_T0093091.1 MGP_NODShiLtJ_G0034904.1 mouse_genomes_project 9 96502589 96571866 - MGP_NODShiLtJ_P0093091 Snx14 protein_coding protein_coding MGP_NODShiLtJ_T0093092.1 MGP_NODShiLtJ_G0034904.1 mouse_genomes_project 9 96507367 96571881 - MGP_NODShiLtJ_P0093092 Snx14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093093.1 MGP_NODShiLtJ_G0034904.1 mouse_genomes_project 9 96519422 96521734 - Snx14 protein_coding retained_intron MGP_NODShiLtJ_T0093095.1 MGP_NODShiLtJ_G0034904.1 mouse_genomes_project 9 96551918 96571864 - Snx14 protein_coding retained_intron MGP_NODShiLtJ_T0092665.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982364 78089498 + MGP_NODShiLtJ_P0092665 protein_coding protein_coding MGP_NODShiLtJ_T0092666.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982383 78090385 + MGP_NODShiLtJ_P0092666 protein_coding protein_coding MGP_NODShiLtJ_T0092667.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982383 78063193 + MGP_NODShiLtJ_P0092667 protein_coding protein_coding MGP_NODShiLtJ_T0092668.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982410 78089018 + MGP_NODShiLtJ_P0092668 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092669.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982411 78090105 + MGP_NODShiLtJ_P0092669 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092670.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982419 77996947 + protein_coding processed_transcript MGP_NODShiLtJ_T0092671.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982483 77995639 + protein_coding processed_transcript MGP_NODShiLtJ_T0092672.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982485 78013399 + protein_coding retained_intron MGP_NODShiLtJ_T0092673.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 77982508 78090369 + MGP_NODShiLtJ_P0092673 protein_coding protein_coding MGP_NODShiLtJ_T0092674.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78009528 78090124 + MGP_NODShiLtJ_P0092674 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092675.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78012950 78040567 + MGP_NODShiLtJ_P0092675 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092676.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78022655 78024753 + protein_coding retained_intron MGP_NODShiLtJ_T0092677.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78029005 78030611 + protein_coding processed_transcript MGP_NODShiLtJ_T0092678.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78029045 78041626 + MGP_NODShiLtJ_P0092678 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092679.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78040573 78047707 + protein_coding retained_intron MGP_NODShiLtJ_T0092680.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78046645 78048735 + protein_coding retained_intron MGP_NODShiLtJ_T0092681.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78050163 78053590 + protein_coding retained_intron MGP_NODShiLtJ_T0092682.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78061081 78089275 + MGP_NODShiLtJ_P0092682 protein_coding protein_coding MGP_NODShiLtJ_T0092683.1 MGP_NODShiLtJ_G0034810.1 mouse_genomes_project 9 78087024 78090235 + MGP_NODShiLtJ_P0092683 protein_coding protein_coding MGP_NODShiLtJ_T0005404.1 MGP_NODShiLtJ_G0004567.1 mouse_genomes_project 9 71822425 71832435 + Gm15563 antisense antisense MGP_NODShiLtJ_T0090987.1 MGP_NODShiLtJ_G0034250.1 mouse_genomes_project 9 21646345 21679900 + MGP_NODShiLtJ_P0090987 Ilf3 protein_coding protein_coding MGP_NODShiLtJ_T0090988.1 MGP_NODShiLtJ_G0034250.1 mouse_genomes_project 9 21646345 21683461 + MGP_NODShiLtJ_P0090988 Ilf3 protein_coding protein_coding MGP_NODShiLtJ_T0090989.1 MGP_NODShiLtJ_G0034250.1 mouse_genomes_project 9 21680974 21683470 + MGP_NODShiLtJ_P0090989 Ilf3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0011623.1 MGP_NODShiLtJ_G0009756.1 mouse_genomes_project 9 21035974 21036295 + Gm26274 misc_RNA misc_RNA MGP_NODShiLtJ_T0100917.1 MGP_NODShiLtJ_G0039311.1 mouse_genomes_project 9 111362158 111362290 - Gm24638 snoRNA snoRNA MGP_NODShiLtJ_T0093500.1 MGP_NODShiLtJ_G0034999.1 mouse_genomes_project 9 113444280 113456012 - MGP_NODShiLtJ_P0093500 Cdv3 protein_coding protein_coding MGP_NODShiLtJ_T0093501.1 MGP_NODShiLtJ_G0034999.1 mouse_genomes_project 9 113452247 113455624 - Cdv3 protein_coding retained_intron MGP_NODShiLtJ_T0094851.1 MGP_NODShiLtJ_G0035261.1 mouse_genomes_project 9 134851708 134886291 + MGP_NODShiLtJ_P0094851 Tcaim protein_coding protein_coding MGP_NODShiLtJ_T0094852.1 MGP_NODShiLtJ_G0035261.1 mouse_genomes_project 9 134851730 134858029 + Tcaim protein_coding processed_transcript MGP_NODShiLtJ_T0094853.1 MGP_NODShiLtJ_G0035261.1 mouse_genomes_project 9 134851765 134886284 + MGP_NODShiLtJ_P0094853 Tcaim protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093807.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118004667 118015363 + MGP_NODShiLtJ_P0093807 Rassf1 protein_coding protein_coding MGP_NODShiLtJ_T0093808.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118004674 118007619 + Rassf1 protein_coding retained_intron MGP_NODShiLtJ_T0093809.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118004679 118015359 + MGP_NODShiLtJ_P0093809 Rassf1 protein_coding protein_coding MGP_NODShiLtJ_T0093810.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118004702 118015359 + MGP_NODShiLtJ_P0093810 Rassf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093811.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118007695 118015359 + MGP_NODShiLtJ_P0093811 Rassf1 protein_coding protein_coding MGP_NODShiLtJ_T0093812.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118008488 118010908 + Rassf1 protein_coding processed_transcript MGP_NODShiLtJ_T0093813.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118009718 118015359 + Rassf1 protein_coding processed_transcript MGP_NODShiLtJ_T0093814.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118009850 118015359 + Rassf1 protein_coding retained_intron MGP_NODShiLtJ_T0093815.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118011042 118014927 + Rassf1 protein_coding retained_intron MGP_NODShiLtJ_T0093816.1 MGP_NODShiLtJ_G0035056.1 mouse_genomes_project 9 118011049 118013523 + Rassf1 protein_coding retained_intron MGP_NODShiLtJ_T0099616.1 MGP_NODShiLtJ_G0038010.1 mouse_genomes_project 9 76068649 76068748 + Gm23588 snRNA snRNA MGP_NODShiLtJ_T0094498.1 MGP_NODShiLtJ_G0035161.1 mouse_genomes_project 9 121820660 121824539 - MGP_NODShiLtJ_P0094498 Gm590 protein_coding protein_coding MGP_NODShiLtJ_T0093561.1 MGP_NODShiLtJ_G0035011.1 mouse_genomes_project 9 115368365 115370761 - MGP_NODShiLtJ_P0093561 Nudt16 protein_coding protein_coding MGP_NODShiLtJ_T0093562.1 MGP_NODShiLtJ_G0035011.1 mouse_genomes_project 9 115368794 115371254 - MGP_NODShiLtJ_P0093562 Nudt16 protein_coding protein_coding MGP_NODShiLtJ_T0093563.1 MGP_NODShiLtJ_G0035011.1 mouse_genomes_project 9 115369121 115371229 - Nudt16 protein_coding retained_intron MGP_NODShiLtJ_T0093564.1 MGP_NODShiLtJ_G0035011.1 mouse_genomes_project 9 115369121 115371229 - Nudt16 protein_coding retained_intron MGP_NODShiLtJ_T0093565.1 MGP_NODShiLtJ_G0035011.1 mouse_genomes_project 9 115369655 115371222 - MGP_NODShiLtJ_P0093565 Nudt16 protein_coding protein_coding MGP_NODShiLtJ_T0015949.1 MGP_NODShiLtJ_G0014057.1 mouse_genomes_project 9 78389722 78390539 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092219.1 MGP_NODShiLtJ_G0034702.1 mouse_genomes_project 9 64225306 64249263 + MGP_NODShiLtJ_P0092219 Pkm protein_coding protein_coding MGP_NODShiLtJ_T0092220.1 MGP_NODShiLtJ_G0034702.1 mouse_genomes_project 9 64225306 64249263 + MGP_NODShiLtJ_P0092220 Pkm protein_coding protein_coding MGP_NODShiLtJ_T0092549.1 MGP_NODShiLtJ_G0034786.1 mouse_genomes_project 9 73174013 73336042 + MGP_NODShiLtJ_P0092549 Vps13c protein_coding protein_coding MGP_NODShiLtJ_T0092550.1 MGP_NODShiLtJ_G0034786.1 mouse_genomes_project 9 73174044 73323731 + MGP_NODShiLtJ_P0092550 Vps13c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091191.1 MGP_NODShiLtJ_G0034322.1 mouse_genomes_project 9 33734731 33769071 - MGP_NODShiLtJ_P0091191 Kcnj5 protein_coding protein_coding MGP_NODShiLtJ_T0099617.1 MGP_NODShiLtJ_G0038011.1 mouse_genomes_project 9 76074164 76074271 - Gm23730 snRNA snRNA MGP_NODShiLtJ_T0016015.1 MGP_NODShiLtJ_G0014123.1 mouse_genomes_project 9 106315677 106315945 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090685.1 MGP_NODShiLtJ_G0034123.1 mouse_genomes_project 9 5282475 5293668 + MGP_NODShiLtJ_P0090685 Mmp3 protein_coding protein_coding MGP_NODShiLtJ_T0005361.1 MGP_NODShiLtJ_G0004537.1 mouse_genomes_project 9 21339240 21377074 + 1700084C06Rik antisense antisense MGP_NODShiLtJ_T0091422.1 MGP_NODShiLtJ_G0034426.1 mouse_genomes_project 9 41532621 41533740 - MGP_NODShiLtJ_P0091422 Olfr938 protein_coding protein_coding MGP_NODShiLtJ_T0098116.1 MGP_NODShiLtJ_G0036528.1 mouse_genomes_project 9 113081779 113081883 - n-R5s89 rRNA rRNA MGP_NODShiLtJ_T0091277.1 MGP_NODShiLtJ_G0034349.1 mouse_genomes_project 9 38344887 38347941 + MGP_NODShiLtJ_P0091277 Gm7257 protein_coding protein_coding MGP_NODShiLtJ_T0011631.1 MGP_NODShiLtJ_G0009764.1 mouse_genomes_project 9 86956520 86956806 + Gm25433 misc_RNA misc_RNA MGP_NODShiLtJ_T0091490.1 MGP_NODShiLtJ_G0034468.1 mouse_genomes_project 9 43720518 43721360 + protein_coding retained_intron MGP_NODShiLtJ_T0094834.1 MGP_NODShiLtJ_G0035256.1 mouse_genomes_project 9 133981862 133996993 - MGP_NODShiLtJ_P0094834 Pomgnt2 protein_coding protein_coding MGP_NODShiLtJ_T0094899.1 MGP_NODShiLtJ_G0035280.1 mouse_genomes_project 9 135787851 135914281 + MGP_NODShiLtJ_P0094899 Ccr9 protein_coding protein_coding MGP_NODShiLtJ_T0094906.1 MGP_NODShiLtJ_G0035280.1 mouse_genomes_project 9 135898877 135914279 + MGP_NODShiLtJ_P0094906 Ccr9 protein_coding protein_coding MGP_NODShiLtJ_T0094907.1 MGP_NODShiLtJ_G0035280.1 mouse_genomes_project 9 135898893 135913842 + MGP_NODShiLtJ_P0094907 Ccr9 protein_coding protein_coding MGP_NODShiLtJ_T0094908.1 MGP_NODShiLtJ_G0035280.1 mouse_genomes_project 9 135898895 135914287 + MGP_NODShiLtJ_P0094908 Ccr9 protein_coding protein_coding MGP_NODShiLtJ_T0094909.1 MGP_NODShiLtJ_G0035280.1 mouse_genomes_project 9 135906851 135915772 + MGP_NODShiLtJ_P0094909 Ccr9 protein_coding protein_coding MGP_NODShiLtJ_T0100899.1 MGP_NODShiLtJ_G0039293.1 mouse_genomes_project 9 75675226 75675357 - Gm24257 snoRNA snoRNA MGP_NODShiLtJ_T0011635.1 MGP_NODShiLtJ_G0009768.1 mouse_genomes_project 9 113062328 113062650 + Gm25842 misc_RNA misc_RNA MGP_NODShiLtJ_T0091281.1 MGP_NODShiLtJ_G0034353.1 mouse_genomes_project 9 38566051 38568925 - MGP_NODShiLtJ_P0091281 A630095E13Rik protein_coding protein_coding MGP_NODShiLtJ_T0091282.1 MGP_NODShiLtJ_G0034353.1 mouse_genomes_project 9 38566051 38568925 - MGP_NODShiLtJ_P0091282 A630095E13Rik protein_coding protein_coding MGP_NODShiLtJ_T0091283.1 MGP_NODShiLtJ_G0034353.1 mouse_genomes_project 9 38566053 38575808 - A630095E13Rik protein_coding retained_intron MGP_NODShiLtJ_T0092644.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77493001 77782282 - MGP_NODShiLtJ_P0092644 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092645.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77494549 77548408 - Tcf12 protein_coding retained_intron MGP_NODShiLtJ_T0092646.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77494565 77782256 - MGP_NODShiLtJ_P0092646 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092647.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77494570 77548718 - MGP_NODShiLtJ_P0092647 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092648.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77494574 77782241 - MGP_NODShiLtJ_P0092648 Tcf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092649.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77495020 77782085 - MGP_NODShiLtJ_P0092649 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092650.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77495809 77782306 - MGP_NODShiLtJ_P0092650 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092651.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77500193 77548411 - MGP_NODShiLtJ_P0092651 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092652.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77500196 77782247 - MGP_NODShiLtJ_P0092652 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092653.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77508841 77781636 - MGP_NODShiLtJ_P0092653 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092654.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77519249 77536529 - Tcf12 protein_coding processed_transcript MGP_NODShiLtJ_T0092655.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77527809 77548307 - MGP_NODShiLtJ_P0092655 Tcf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092656.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77527809 77780204 - MGP_NODShiLtJ_P0092656 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092657.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77534549 77656724 - MGP_NODShiLtJ_P0092657 Tcf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092658.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77534939 77656722 - MGP_NODShiLtJ_P0092658 Tcf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092659.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77535560 77782206 - MGP_NODShiLtJ_P0092659 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092660.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77535581 77782034 - MGP_NODShiLtJ_P0092660 Tcf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092661.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77536254 77580506 - MGP_NODShiLtJ_P0092661 Tcf12 protein_coding protein_coding MGP_NODShiLtJ_T0092662.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77537032 77782226 - MGP_NODShiLtJ_P0092662 Tcf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092663.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77601656 77782282 - Tcf12 protein_coding retained_intron MGP_NODShiLtJ_T0092664.1 MGP_NODShiLtJ_G0034809.1 mouse_genomes_project 9 77776692 77780961 - Tcf12 protein_coding retained_intron MGP_NODShiLtJ_T0009149.1 MGP_NODShiLtJ_G0007345.1 mouse_genomes_project 9 38594404 38617286 - 1700027I24Rik lincRNA lincRNA MGP_NODShiLtJ_T0002378.1 MGP_NODShiLtJ_G0002287.1 mouse_genomes_project 9 109982389 109983653 - TEC TEC MGP_NODShiLtJ_T0002344.1 MGP_NODShiLtJ_G0002254.1 mouse_genomes_project 9 89267589 89269566 + TEC TEC MGP_NODShiLtJ_T0100872.1 MGP_NODShiLtJ_G0039266.1 mouse_genomes_project 9 25678342 25678476 + Gm23893 snoRNA snoRNA MGP_NODShiLtJ_T0091945.1 MGP_NODShiLtJ_G0034615.1 mouse_genomes_project 9 57806899 57810493 + MGP_NODShiLtJ_P0091945 Sln protein_coding protein_coding MGP_NODShiLtJ_T0094067.1 MGP_NODShiLtJ_G0035091.1 mouse_genomes_project 9 118833950 118839051 + Rhoa protein_coding retained_intron MGP_NODShiLtJ_T0094068.1 MGP_NODShiLtJ_G0035091.1 mouse_genomes_project 9 118834308 118866026 + MGP_NODShiLtJ_P0094068 Rhoa protein_coding protein_coding MGP_NODShiLtJ_T0094069.1 MGP_NODShiLtJ_G0035091.1 mouse_genomes_project 9 118834340 118858919 + MGP_NODShiLtJ_P0094069 Rhoa protein_coding protein_coding MGP_NODShiLtJ_T0094070.1 MGP_NODShiLtJ_G0035091.1 mouse_genomes_project 9 118858562 118866043 + Rhoa protein_coding retained_intron MGP_NODShiLtJ_T0002354.1 MGP_NODShiLtJ_G0002263.1 mouse_genomes_project 9 95234475 95235553 - TEC TEC MGP_NODShiLtJ_T0094026.1 MGP_NODShiLtJ_G0035083.1 mouse_genomes_project 9 118537703 118540246 + MGP_NODShiLtJ_P0094026 Amigo3 protein_coding protein_coding MGP_NODShiLtJ_T0091645.1 MGP_NODShiLtJ_G0034518.1 mouse_genomes_project 9 48074171 48079646 - Tmem25 protein_coding processed_transcript MGP_NODShiLtJ_T0091646.1 MGP_NODShiLtJ_G0034518.1 mouse_genomes_project 9 48074171 48079711 - MGP_NODShiLtJ_P0091646 Tmem25 protein_coding protein_coding MGP_NODShiLtJ_T0091647.1 MGP_NODShiLtJ_G0034518.1 mouse_genomes_project 9 48074171 48079646 - MGP_NODShiLtJ_P0091647 Tmem25 protein_coding protein_coding MGP_NODShiLtJ_T0015992.1 MGP_NODShiLtJ_G0014100.1 mouse_genomes_project 9 98064990 98065453 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094205.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119372933 119395392 + MGP_NODShiLtJ_P0094205 Ip6k2 protein_coding protein_coding MGP_NODShiLtJ_T0094206.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119372933 119387139 + MGP_NODShiLtJ_P0094206 Ip6k2 protein_coding protein_coding MGP_NODShiLtJ_T0094207.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119372959 119387984 + Ip6k2 protein_coding retained_intron MGP_NODShiLtJ_T0094208.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119373002 119386127 + Ip6k2 protein_coding retained_intron MGP_NODShiLtJ_T0094209.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119373002 119386841 + MGP_NODShiLtJ_P0094209 Ip6k2 protein_coding protein_coding MGP_NODShiLtJ_T0094210.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119373002 119386494 + MGP_NODShiLtJ_P0094210 Ip6k2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094211.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119385143 119395397 + MGP_NODShiLtJ_P0094211 Ip6k2 protein_coding protein_coding MGP_NODShiLtJ_T0094212.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119385143 119388419 + MGP_NODShiLtJ_P0094212 Ip6k2 protein_coding protein_coding MGP_NODShiLtJ_T0094213.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119385213 119386591 + MGP_NODShiLtJ_P0094213 Ip6k2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094214.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119385280 119387144 + MGP_NODShiLtJ_P0094214 Ip6k2 protein_coding protein_coding MGP_NODShiLtJ_T0094215.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119385501 119386842 + MGP_NODShiLtJ_P0094215 Ip6k2 protein_coding protein_coding MGP_NODShiLtJ_T0094216.1 MGP_NODShiLtJ_G0035111.1 mouse_genomes_project 9 119387336 119388522 + Ip6k2 protein_coding retained_intron MGP_NODShiLtJ_T0009247.1 MGP_NODShiLtJ_G0007424.1 mouse_genomes_project 9 117655535 117658322 + 1700039M15Rik lincRNA lincRNA MGP_NODShiLtJ_T0015952.1 MGP_NODShiLtJ_G0014060.1 mouse_genomes_project 9 79018755 79019068 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0005492.1 MGP_NODShiLtJ_G0004630.1 mouse_genomes_project 9 126619722 126625377 - Gm4665 antisense antisense MGP_NODShiLtJ_T0002311.1 MGP_NODShiLtJ_G0002221.1 mouse_genomes_project 9 60440562 60442131 + TEC TEC MGP_NODShiLtJ_T0093082.1 MGP_NODShiLtJ_G0034902.1 mouse_genomes_project 9 95797579 95829072 - MGP_NODShiLtJ_P0093082 Tbx18 protein_coding protein_coding MGP_NODShiLtJ_T0093083.1 MGP_NODShiLtJ_G0034902.1 mouse_genomes_project 9 95819849 95828309 - Tbx18 protein_coding processed_transcript MGP_NODShiLtJ_T0091366.1 MGP_NODShiLtJ_G0034377.1 mouse_genomes_project 9 39875148 39876196 + MGP_NODShiLtJ_P0091366 Olfr876 protein_coding protein_coding MGP_NODShiLtJ_T0094934.1 MGP_NODShiLtJ_G0035291.1 mouse_genomes_project 9 136673900 136679213 + MGP_NODShiLtJ_P0094934 Nlrp4g protein_coding protein_coding MGP_NODShiLtJ_T0010958.1 MGP_NODShiLtJ_G0009091.1 mouse_genomes_project 9 55908064 55908155 - Gm27686 miRNA miRNA MGP_NODShiLtJ_T0090863.1 MGP_NODShiLtJ_G0034191.1 mouse_genomes_project 9 18925571 18926678 - MGP_NODShiLtJ_P0090863 Olfr843 protein_coding protein_coding MGP_NODShiLtJ_T0005356.1 MGP_NODShiLtJ_G0004535.1 mouse_genomes_project 9 13651541 13666676 + Gm10706 antisense antisense MGP_NODShiLtJ_T0099608.1 MGP_NODShiLtJ_G0038002.1 mouse_genomes_project 9 68323005 68323147 + Gm25995 snRNA snRNA MGP_NODShiLtJ_T0002385.1 MGP_NODShiLtJ_G0002294.1 mouse_genomes_project 9 111111876 111113760 + TEC TEC MGP_NODShiLtJ_T0002331.1 MGP_NODShiLtJ_G0002241.1 mouse_genomes_project 9 78527076 78534254 + TEC TEC MGP_NODShiLtJ_T0093797.1 MGP_NODShiLtJ_G0035054.1 mouse_genomes_project 9 117995367 117998847 + MGP_NODShiLtJ_P0093797 Nprl2 protein_coding protein_coding MGP_NODShiLtJ_T0093798.1 MGP_NODShiLtJ_G0035054.1 mouse_genomes_project 9 117995382 117997775 + MGP_NODShiLtJ_P0093798 Nprl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093799.1 MGP_NODShiLtJ_G0035054.1 mouse_genomes_project 9 117995386 117998836 + Nprl2 protein_coding retained_intron MGP_NODShiLtJ_T0093800.1 MGP_NODShiLtJ_G0035054.1 mouse_genomes_project 9 117995402 117996829 + Nprl2 protein_coding retained_intron MGP_NODShiLtJ_T0093801.1 MGP_NODShiLtJ_G0035054.1 mouse_genomes_project 9 117997117 117997601 + Nprl2 protein_coding retained_intron MGP_NODShiLtJ_T0091462.1 MGP_NODShiLtJ_G0034460.1 mouse_genomes_project 9 42960086 42961202 - MGP_NODShiLtJ_P0091462 Olfr985 protein_coding protein_coding MGP_NODShiLtJ_T0093302.1 MGP_NODShiLtJ_G0034952.1 mouse_genomes_project 9 107026123 107639706 - MGP_NODShiLtJ_P0093302 Clstn2 protein_coding protein_coding MGP_NODShiLtJ_T0093303.1 MGP_NODShiLtJ_G0034952.1 mouse_genomes_project 9 107034987 107639508 - MGP_NODShiLtJ_P0093303 Clstn2 protein_coding protein_coding MGP_NODShiLtJ_T0002298.1 MGP_NODShiLtJ_G0002208.1 mouse_genomes_project 9 21543983 21546682 + TEC TEC MGP_NODShiLtJ_T0005493.1 MGP_NODShiLtJ_G0004631.1 mouse_genomes_project 9 126635961 126637407 - Gm26962 antisense antisense MGP_NODShiLtJ_T0091280.1 MGP_NODShiLtJ_G0034352.1 mouse_genomes_project 9 38520950 38522308 - MGP_NODShiLtJ_P0091280 Gm17689 protein_coding protein_coding MGP_NODShiLtJ_T0015923.1 MGP_NODShiLtJ_G0014031.1 mouse_genomes_project 9 39703738 39704732 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091372.1 MGP_NODShiLtJ_G0034383.1 mouse_genomes_project 9 40152192 40153765 + MGP_NODShiLtJ_P0091372 Olfr884 protein_coding protein_coding MGP_NODShiLtJ_T0091373.1 MGP_NODShiLtJ_G0034383.1 mouse_genomes_project 9 40152835 40153765 + MGP_NODShiLtJ_P0091373 Olfr884 protein_coding protein_coding MGP_NODShiLtJ_T0018369.1 MGP_NODShiLtJ_G0015605.1 mouse_genomes_project 9 64586604 64592089 - Gm15507 processed_transcript processed_transcript MGP_NODShiLtJ_T0018370.1 MGP_NODShiLtJ_G0015605.1 mouse_genomes_project 9 64586806 64592089 - Gm15507 processed_transcript processed_transcript MGP_NODShiLtJ_T0018371.1 MGP_NODShiLtJ_G0015605.1 mouse_genomes_project 9 64589689 64592119 - Gm15507 processed_transcript processed_transcript MGP_NODShiLtJ_T0016010.1 MGP_NODShiLtJ_G0014118.1 mouse_genomes_project 9 104977830 104978272 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092547.1 MGP_NODShiLtJ_G0034784.1 mouse_genomes_project 9 73088022 73089516 + MGP_NODShiLtJ_P0092547 C2cd4b protein_coding protein_coding MGP_NODShiLtJ_T0090856.1 MGP_NODShiLtJ_G0034184.1 mouse_genomes_project 9 18370215 18371181 + MGP_NODShiLtJ_P0090856 Olfr829 protein_coding protein_coding MGP_NODShiLtJ_T0093292.1 MGP_NODShiLtJ_G0034949.1 mouse_genomes_project 9 106470519 106548191 - MGP_NODShiLtJ_P0093292 Spsb4 protein_coding protein_coding MGP_NODShiLtJ_T0093293.1 MGP_NODShiLtJ_G0034949.1 mouse_genomes_project 9 106470522 106511230 - Spsb4 protein_coding processed_transcript MGP_NODShiLtJ_T0093294.1 MGP_NODShiLtJ_G0034949.1 mouse_genomes_project 9 106471009 106499010 - Spsb4 protein_coding processed_transcript MGP_NODShiLtJ_T0093295.1 MGP_NODShiLtJ_G0034949.1 mouse_genomes_project 9 106521097 106548112 - Spsb4 protein_coding retained_intron MGP_NODShiLtJ_T0093164.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100007321 100023191 + MGP_NODShiLtJ_P0093164 Zic4 protein_coding protein_coding MGP_NODShiLtJ_T0093165.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100012714 100013481 + Zic4 protein_coding processed_transcript MGP_NODShiLtJ_T0093166.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100013159 100023533 + MGP_NODShiLtJ_P0093166 Zic4 protein_coding protein_coding MGP_NODShiLtJ_T0093167.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100013241 100025262 + Zic4 protein_coding retained_intron MGP_NODShiLtJ_T0093168.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100013317 100032063 + MGP_NODShiLtJ_P0093168 Zic4 protein_coding protein_coding MGP_NODShiLtJ_T0093169.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100013845 100023816 + Zic4 protein_coding retained_intron MGP_NODShiLtJ_T0093170.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100015351 100023465 + MGP_NODShiLtJ_P0093170 Zic4 protein_coding protein_coding MGP_NODShiLtJ_T0093171.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100015560 100031228 + MGP_NODShiLtJ_P0093171 Zic4 protein_coding protein_coding MGP_NODShiLtJ_T0093172.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100015697 100018271 + Zic4 protein_coding retained_intron MGP_NODShiLtJ_T0093173.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100022472 100028672 + Zic4 protein_coding retained_intron MGP_NODShiLtJ_T0093174.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100022917 100033621 + MGP_NODShiLtJ_P0093174 Zic4 protein_coding protein_coding MGP_NODShiLtJ_T0093175.1 MGP_NODShiLtJ_G0034925.1 mouse_genomes_project 9 100026683 100032314 + Zic4 protein_coding processed_transcript MGP_NODShiLtJ_T0090875.1 MGP_NODShiLtJ_G0034203.1 mouse_genomes_project 9 19882082 19885228 + MGP_NODShiLtJ_P0090875 Olfr58 protein_coding protein_coding MGP_NODShiLtJ_T0091221.1 MGP_NODShiLtJ_G0034330.1 mouse_genomes_project 9 36840669 36853777 + Srpr protein_coding processed_transcript MGP_NODShiLtJ_T0091234.1 MGP_NODShiLtJ_G0034330.1 mouse_genomes_project 9 36851391 36860251 + MGP_NODShiLtJ_P0091234 Srpr protein_coding protein_coding MGP_NODShiLtJ_T0091235.1 MGP_NODShiLtJ_G0034330.1 mouse_genomes_project 9 36851525 36859075 + MGP_NODShiLtJ_P0091235 Srpr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0091236.1 MGP_NODShiLtJ_G0034330.1 mouse_genomes_project 9 36852134 36853092 + Srpr protein_coding retained_intron MGP_NODShiLtJ_T0091237.1 MGP_NODShiLtJ_G0034330.1 mouse_genomes_project 9 36857917 36890487 + MGP_NODShiLtJ_P0091237 Srpr protein_coding protein_coding MGP_NODShiLtJ_T0010955.1 MGP_NODShiLtJ_G0009088.1 mouse_genomes_project 9 52065749 52065832 - Gm23653 miRNA miRNA MGP_NODShiLtJ_T0005435.1 MGP_NODShiLtJ_G0004590.1 mouse_genomes_project 9 105253462 105255562 - 1700065D16Rik antisense antisense MGP_NODShiLtJ_T0005436.1 MGP_NODShiLtJ_G0004590.1 mouse_genomes_project 9 105253464 105255916 - 1700065D16Rik antisense antisense MGP_NODShiLtJ_T0005437.1 MGP_NODShiLtJ_G0004590.1 mouse_genomes_project 9 105253464 105256367 - 1700065D16Rik antisense antisense MGP_NODShiLtJ_T0005438.1 MGP_NODShiLtJ_G0004590.1 mouse_genomes_project 9 105253465 105255916 - 1700065D16Rik antisense antisense MGP_NODShiLtJ_T0005439.1 MGP_NODShiLtJ_G0004590.1 mouse_genomes_project 9 105253596 105256365 - 1700065D16Rik antisense antisense MGP_NODShiLtJ_T0009133.1 MGP_NODShiLtJ_G0007332.1 mouse_genomes_project 9 25940882 25941329 + Gm29375 lincRNA lincRNA MGP_NODShiLtJ_T0005388.1 MGP_NODShiLtJ_G0004557.1 mouse_genomes_project 9 57604999 57619740 + Gm16124 antisense antisense MGP_NODShiLtJ_T0094737.1 MGP_NODShiLtJ_G0035226.1 mouse_genomes_project 9 131753221 131784698 + MGP_NODShiLtJ_P0094737 Ttc21a protein_coding protein_coding MGP_NODShiLtJ_T0094738.1 MGP_NODShiLtJ_G0035226.1 mouse_genomes_project 9 131753250 131783958 + Ttc21a protein_coding retained_intron MGP_NODShiLtJ_T0094739.1 MGP_NODShiLtJ_G0035226.1 mouse_genomes_project 9 131753251 131779581 + Ttc21a protein_coding retained_intron MGP_NODShiLtJ_T0094740.1 MGP_NODShiLtJ_G0035226.1 mouse_genomes_project 9 131778522 131783074 + Ttc21a protein_coding retained_intron MGP_NODShiLtJ_T0094726.1 MGP_NODShiLtJ_G0035220.1 mouse_genomes_project 9 131279402 131358459 - MGP_NODShiLtJ_P0094726 Scn5a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094727.1 MGP_NODShiLtJ_G0035220.1 mouse_genomes_project 9 131279402 131358459 - MGP_NODShiLtJ_P0094727 Scn5a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094728.1 MGP_NODShiLtJ_G0035220.1 mouse_genomes_project 9 131279410 131358513 - MGP_NODShiLtJ_P0094728 Scn5a protein_coding protein_coding MGP_NODShiLtJ_T0094729.1 MGP_NODShiLtJ_G0035220.1 mouse_genomes_project 9 131279412 131374892 - MGP_NODShiLtJ_P0094729 Scn5a protein_coding protein_coding MGP_NODShiLtJ_T0094730.1 MGP_NODShiLtJ_G0035220.1 mouse_genomes_project 9 131280326 131374892 - MGP_NODShiLtJ_P0094730 Scn5a protein_coding protein_coding MGP_NODShiLtJ_T0094731.1 MGP_NODShiLtJ_G0035220.1 mouse_genomes_project 9 131358371 131359338 - MGP_NODShiLtJ_P0094731 Scn5a protein_coding protein_coding MGP_NODShiLtJ_T0010943.1 MGP_NODShiLtJ_G0009076.1 mouse_genomes_project 9 33435439 33435565 + Gm44453 miRNA miRNA MGP_NODShiLtJ_T0093734.1 MGP_NODShiLtJ_G0035043.1 mouse_genomes_project 9 117176119 117241239 + MGP_NODShiLtJ_P0093734 Vprbp protein_coding protein_coding MGP_NODShiLtJ_T0093735.1 MGP_NODShiLtJ_G0035043.1 mouse_genomes_project 9 117183701 117242183 + MGP_NODShiLtJ_P0093735 Vprbp protein_coding protein_coding MGP_NODShiLtJ_T0093737.1 MGP_NODShiLtJ_G0035043.1 mouse_genomes_project 9 117213134 117215333 + Vprbp protein_coding retained_intron MGP_NODShiLtJ_T0093739.1 MGP_NODShiLtJ_G0035043.1 mouse_genomes_project 9 117235534 117241405 + MGP_NODShiLtJ_P0093739 Vprbp protein_coding protein_coding MGP_NODShiLtJ_T0090861.1 MGP_NODShiLtJ_G0034189.1 mouse_genomes_project 9 18593320 18594256 + MGP_NODShiLtJ_P0090861 Olfr835 protein_coding protein_coding MGP_NODShiLtJ_T0094735.1 MGP_NODShiLtJ_G0035224.1 mouse_genomes_project 9 131716140 131895106 - MGP_NODShiLtJ_P0094735 Cx3cr1 protein_coding protein_coding MGP_NODShiLtJ_T0094743.1 MGP_NODShiLtJ_G0035224.1 mouse_genomes_project 9 131875277 131895105 - MGP_NODShiLtJ_P0094743 Cx3cr1 protein_coding protein_coding MGP_NODShiLtJ_T0090879.1 MGP_NODShiLtJ_G0034207.1 mouse_genomes_project 9 20233356 20234352 - MGP_NODShiLtJ_P0090879 Olfr867 protein_coding protein_coding MGP_NODShiLtJ_T0094912.1 MGP_NODShiLtJ_G0035283.1 mouse_genomes_project 9 135941646 135946924 + MGP_NODShiLtJ_P0094912 Cxcr6 protein_coding protein_coding MGP_NODShiLtJ_T0093603.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115890549 115932270 + Pik3r4 protein_coding retained_intron MGP_NODShiLtJ_T0093604.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115890552 115892325 + MGP_NODShiLtJ_P0093604 Pik3r4 protein_coding protein_coding MGP_NODShiLtJ_T0093605.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115890579 115904918 + Pik3r4 protein_coding retained_intron MGP_NODShiLtJ_T0093606.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115890586 115913063 + Pik3r4 protein_coding retained_intron MGP_NODShiLtJ_T0093607.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115890601 115941912 + MGP_NODShiLtJ_P0093607 Pik3r4 protein_coding protein_coding MGP_NODShiLtJ_T0093608.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115890735 115942037 + MGP_NODShiLtJ_P0093608 Pik3r4 protein_coding protein_coding MGP_NODShiLtJ_T0093609.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115890766 115896391 + MGP_NODShiLtJ_P0093609 Pik3r4 protein_coding protein_coding MGP_NODShiLtJ_T0093610.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115907631 115918256 + MGP_NODShiLtJ_P0093610 Pik3r4 protein_coding protein_coding MGP_NODShiLtJ_T0093611.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115910399 115912603 + Pik3r4 protein_coding retained_intron MGP_NODShiLtJ_T0093612.1 MGP_NODShiLtJ_G0035016.1 mouse_genomes_project 9 115936077 115940775 + Pik3r4 protein_coding retained_intron MGP_NODShiLtJ_T0091717.1 MGP_NODShiLtJ_G0034542.1 mouse_genomes_project 9 49242843 49267582 + MGP_NODShiLtJ_P0091717 Pcsk7 protein_coding protein_coding MGP_NODShiLtJ_T0009174.1 MGP_NODShiLtJ_G0007366.1 mouse_genomes_project 9 66099915 66101312 - Gm10655 lincRNA lincRNA MGP_NODShiLtJ_T0009175.1 MGP_NODShiLtJ_G0007366.1 mouse_genomes_project 9 66099996 66100746 - Gm10655 lincRNA lincRNA MGP_NODShiLtJ_T0002427.1 MGP_NODShiLtJ_G0002336.1 mouse_genomes_project 9 133761049 133764395 - TEC TEC MGP_NODShiLtJ_T0094620.1 MGP_NODShiLtJ_G0035186.1 mouse_genomes_project 9 125857956 125864149 - MGP_NODShiLtJ_P0094620 Ccr4 protein_coding protein_coding MGP_NODShiLtJ_T0092033.1 MGP_NODShiLtJ_G0034645.1 mouse_genomes_project 9 60253764 60294344 + MGP_NODShiLtJ_P0092033 Pstpip1 protein_coding protein_coding MGP_NODShiLtJ_T0092034.1 MGP_NODShiLtJ_G0034645.1 mouse_genomes_project 9 60253778 60294332 + Pstpip1 protein_coding retained_intron MGP_NODShiLtJ_T0092035.1 MGP_NODShiLtJ_G0034645.1 mouse_genomes_project 9 60253778 60294328 + Pstpip1 protein_coding retained_intron MGP_NODShiLtJ_T0092036.1 MGP_NODShiLtJ_G0034645.1 mouse_genomes_project 9 60285885 60291547 + Pstpip1 protein_coding processed_transcript MGP_NODShiLtJ_T0092037.1 MGP_NODShiLtJ_G0034645.1 mouse_genomes_project 9 60287688 60289356 + Pstpip1 protein_coding retained_intron MGP_NODShiLtJ_T0092038.1 MGP_NODShiLtJ_G0034645.1 mouse_genomes_project 9 60288653 60291606 + Pstpip1 protein_coding retained_intron MGP_NODShiLtJ_T0092039.1 MGP_NODShiLtJ_G0034645.1 mouse_genomes_project 9 60288653 60289646 + Pstpip1 protein_coding retained_intron MGP_NODShiLtJ_T0100913.1 MGP_NODShiLtJ_G0039307.1 mouse_genomes_project 9 107021244 107021371 - Gm25607 snoRNA snoRNA MGP_NODShiLtJ_T0092573.1 MGP_NODShiLtJ_G0034790.1 mouse_genomes_project 9 75238302 75241580 - MGP_NODShiLtJ_P0092573 Foxb1 protein_coding protein_coding MGP_NODShiLtJ_T0091813.1 MGP_NODShiLtJ_G0034576.1 mouse_genomes_project 9 54200548 54209500 - MGP_NODShiLtJ_P0091813 Pts protein_coding protein_coding MGP_NODShiLtJ_T0016004.1 MGP_NODShiLtJ_G0014112.1 mouse_genomes_project 9 101669971 101670785 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015978.1 MGP_NODShiLtJ_G0014086.1 mouse_genomes_project 9 90966853 90967259 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002379.1 MGP_NODShiLtJ_G0002288.1 mouse_genomes_project 9 110545905 110551883 + TEC TEC MGP_NODShiLtJ_T0015997.1 MGP_NODShiLtJ_G0014105.1 mouse_genomes_project 9 99176818 99177110 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002341.1 MGP_NODShiLtJ_G0002251.1 mouse_genomes_project 9 83114806 83130082 + TEC TEC MGP_NODShiLtJ_T0100897.1 MGP_NODShiLtJ_G0039291.1 mouse_genomes_project 9 73664882 73665012 + Gm22382 snoRNA snoRNA MGP_NODShiLtJ_T0009246.1 MGP_NODShiLtJ_G0007423.1 mouse_genomes_project 9 116420562 116421734 - Gm29208 lincRNA lincRNA MGP_NODShiLtJ_T0094318.1 MGP_NODShiLtJ_G0035131.1 mouse_genomes_project 9 120155847 120157997 - Fbxw19 protein_coding retained_intron MGP_NODShiLtJ_T0094319.1 MGP_NODShiLtJ_G0035131.1 mouse_genomes_project 9 120157754 120409161 - MGP_NODShiLtJ_P0094319 Fbxw19 protein_coding protein_coding MGP_NODShiLtJ_T0092282.1 MGP_NODShiLtJ_G0034713.1 mouse_genomes_project 9 66681482 66682737 - MGP_NODShiLtJ_P0092282 Rplp1 protein_coding protein_coding MGP_NODShiLtJ_T0092093.1 MGP_NODShiLtJ_G0034662.1 mouse_genomes_project 9 61731136 61761087 - MGP_NODShiLtJ_P0092093 Ppcdc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010954.1 MGP_NODShiLtJ_G0009087.1 mouse_genomes_project 9 49279070 49279140 - Mir7087 miRNA miRNA MGP_NODShiLtJ_T0018436.1 MGP_NODShiLtJ_G0015632.1 mouse_genomes_project 9 135787508 135826176 + processed_transcript processed_transcript MGP_NODShiLtJ_T0092252.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65244938 65383105 - MGP_NODShiLtJ_P0092252 Lrrc49 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092253.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65245251 65336544 - MGP_NODShiLtJ_P0092253 Lrrc49 protein_coding protein_coding MGP_NODShiLtJ_T0092254.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65265605 65383099 - MGP_NODShiLtJ_P0092254 Lrrc49 protein_coding protein_coding MGP_NODShiLtJ_T0092255.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65265605 65383139 - MGP_NODShiLtJ_P0092255 Lrrc49 protein_coding protein_coding MGP_NODShiLtJ_T0092256.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65265615 65382515 - MGP_NODShiLtJ_P0092256 Lrrc49 protein_coding protein_coding MGP_NODShiLtJ_T0092257.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65265615 65382515 - MGP_NODShiLtJ_P0092257 Lrrc49 protein_coding protein_coding MGP_NODShiLtJ_T0092258.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65266198 65278123 - Lrrc49 protein_coding retained_intron MGP_NODShiLtJ_T0092259.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65289254 65382884 - Lrrc49 protein_coding retained_intron MGP_NODShiLtJ_T0092260.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65289808 65336453 - Lrrc49 protein_coding processed_transcript MGP_NODShiLtJ_T0092261.1 MGP_NODShiLtJ_G0034708.1 mouse_genomes_project 9 65372904 65382653 - MGP_NODShiLtJ_P0092261 Lrrc49 protein_coding protein_coding MGP_NODShiLtJ_T0091603.1 MGP_NODShiLtJ_G0034509.1 mouse_genomes_project 9 47646850 47653486 - MGP_NODShiLtJ_P0091603 Foxr1 protein_coding protein_coding MGP_NODShiLtJ_T0099614.1 MGP_NODShiLtJ_G0038008.1 mouse_genomes_project 9 72392425 72392573 + Gm22145 snRNA snRNA MGP_NODShiLtJ_T0094503.1 MGP_NODShiLtJ_G0035163.1 mouse_genomes_project 9 121865770 121885542 + MGP_NODShiLtJ_P0094503 Lrrc2 protein_coding protein_coding MGP_NODShiLtJ_T0094504.1 MGP_NODShiLtJ_G0035163.1 mouse_genomes_project 9 121865838 121891843 + MGP_NODShiLtJ_P0094504 Lrrc2 protein_coding protein_coding MGP_NODShiLtJ_T0094505.1 MGP_NODShiLtJ_G0035163.1 mouse_genomes_project 9 121872857 121889808 + MGP_NODShiLtJ_P0094505 Lrrc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092162.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62618910 62654024 - MGP_NODShiLtJ_P0092162 Pml protein_coding protein_coding MGP_NODShiLtJ_T0092163.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62618910 62654024 - MGP_NODShiLtJ_P0092163 Pml protein_coding protein_coding MGP_NODShiLtJ_T0092164.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62618920 62653971 - MGP_NODShiLtJ_P0092164 Pml protein_coding protein_coding MGP_NODShiLtJ_T0092165.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62618921 62653903 - MGP_NODShiLtJ_P0092165 Pml protein_coding protein_coding MGP_NODShiLtJ_T0092166.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62619376 62634254 - Pml protein_coding retained_intron MGP_NODShiLtJ_T0092167.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62620590 62653898 - MGP_NODShiLtJ_P0092167 Pml protein_coding protein_coding MGP_NODShiLtJ_T0092168.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62621102 62630962 - Pml protein_coding processed_transcript MGP_NODShiLtJ_T0092169.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62621893 62654024 - MGP_NODShiLtJ_P0092169 Pml protein_coding protein_coding MGP_NODShiLtJ_T0092170.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62630682 62654024 - MGP_NODShiLtJ_P0092170 Pml protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092171.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62631225 62634264 - Pml protein_coding retained_intron MGP_NODShiLtJ_T0092172.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62651034 62653861 - MGP_NODShiLtJ_P0092172 Pml protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092173.1 MGP_NODShiLtJ_G0034685.1 mouse_genomes_project 9 62651079 62654024 - MGP_NODShiLtJ_P0092173 Pml protein_coding protein_coding MGP_NODShiLtJ_T0002377.1 MGP_NODShiLtJ_G0002286.1 mouse_genomes_project 9 109035616 109036306 + TEC TEC MGP_NODShiLtJ_T0094487.1 MGP_NODShiLtJ_G0035159.1 mouse_genomes_project 9 121769754 121782698 - MGP_NODShiLtJ_P0094487 Tmie protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094488.1 MGP_NODShiLtJ_G0035159.1 mouse_genomes_project 9 121778103 121781976 - Tmie protein_coding processed_transcript MGP_NODShiLtJ_T0094489.1 MGP_NODShiLtJ_G0035159.1 mouse_genomes_project 9 121778151 121778703 - Tmie protein_coding retained_intron MGP_NODShiLtJ_T0093747.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117255669 117646270 - MGP_NODShiLtJ_P0093747 Dock3 protein_coding protein_coding MGP_NODShiLtJ_T0093748.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117255950 117277699 - MGP_NODShiLtJ_P0093748 Dock3 protein_coding protein_coding MGP_NODShiLtJ_T0093749.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117259621 117264645 - MGP_NODShiLtJ_P0093749 Dock3 protein_coding protein_coding MGP_NODShiLtJ_T0093750.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117271319 117273373 - Dock3 protein_coding processed_transcript MGP_NODShiLtJ_T0093751.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117276056 117278001 - Dock3 protein_coding retained_intron MGP_NODShiLtJ_T0093752.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117279199 117314443 - MGP_NODShiLtJ_P0093752 Dock3 protein_coding protein_coding MGP_NODShiLtJ_T0093753.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117306033 117330105 - MGP_NODShiLtJ_P0093753 Dock3 protein_coding protein_coding MGP_NODShiLtJ_T0093754.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117396878 117398760 - Dock3 protein_coding retained_intron MGP_NODShiLtJ_T0093755.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117424394 117646229 - Dock3 protein_coding retained_intron MGP_NODShiLtJ_T0093756.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117463015 117646217 - Dock3 protein_coding retained_intron MGP_NODShiLtJ_T0093757.1 MGP_NODShiLtJ_G0035046.1 mouse_genomes_project 9 117488757 117645943 - Dock3 protein_coding retained_intron MGP_NODShiLtJ_T0094900.1 MGP_NODShiLtJ_G0035281.1 mouse_genomes_project 9 135811028 135839622 - MGP_NODShiLtJ_P0094900 Lztfl1 protein_coding protein_coding MGP_NODShiLtJ_T0094901.1 MGP_NODShiLtJ_G0035281.1 mouse_genomes_project 9 135831318 135833327 - Lztfl1 protein_coding retained_intron MGP_NODShiLtJ_T0094902.1 MGP_NODShiLtJ_G0035281.1 mouse_genomes_project 9 135833066 135844626 - Lztfl1 protein_coding processed_transcript MGP_NODShiLtJ_T0094903.1 MGP_NODShiLtJ_G0035281.1 mouse_genomes_project 9 135839475 135844620 - Lztfl1 protein_coding processed_transcript MGP_NODShiLtJ_T0094904.1 MGP_NODShiLtJ_G0035281.1 mouse_genomes_project 9 135839479 135844622 - Lztfl1 protein_coding processed_transcript MGP_NODShiLtJ_T0094905.1 MGP_NODShiLtJ_G0035281.1 mouse_genomes_project 9 135841958 135844655 - Lztfl1 protein_coding retained_intron MGP_NODShiLtJ_T0092221.1 MGP_NODShiLtJ_G0034703.1 mouse_genomes_project 9 64250031 64285908 + MGP_NODShiLtJ_P0092221 Gramd2 protein_coding protein_coding MGP_NODShiLtJ_T0092222.1 MGP_NODShiLtJ_G0034703.1 mouse_genomes_project 9 64279621 64290565 + MGP_NODShiLtJ_P0092222 Gramd2 protein_coding protein_coding MGP_NODShiLtJ_T0092223.1 MGP_NODShiLtJ_G0034703.1 mouse_genomes_project 9 64279748 64288409 + MGP_NODShiLtJ_P0092223 Gramd2 protein_coding protein_coding MGP_NODShiLtJ_T0092224.1 MGP_NODShiLtJ_G0034703.1 mouse_genomes_project 9 64282141 64285826 + Gramd2 protein_coding retained_intron MGP_NODShiLtJ_T0092225.1 MGP_NODShiLtJ_G0034703.1 mouse_genomes_project 9 64283165 64288299 + MGP_NODShiLtJ_P0092225 Gramd2 protein_coding protein_coding MGP_NODShiLtJ_T0092226.1 MGP_NODShiLtJ_G0034703.1 mouse_genomes_project 9 64286100 64290565 + Gramd2 protein_coding retained_intron MGP_NODShiLtJ_T0011625.1 MGP_NODShiLtJ_G0009758.1 mouse_genomes_project 9 45590079 45590138 - Gm24420 misc_RNA misc_RNA MGP_NODShiLtJ_T0010928.1 MGP_NODShiLtJ_G0009061.1 mouse_genomes_project 9 6228724 6228820 + Mir1899 miRNA miRNA MGP_NODShiLtJ_T0093484.1 MGP_NODShiLtJ_G0034997.1 mouse_genomes_project 9 113335814 113373750 - MGP_NODShiLtJ_P0093484 1300017J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0093485.1 MGP_NODShiLtJ_G0034997.1 mouse_genomes_project 9 113335815 113342048 - 1300017J02Rik protein_coding retained_intron MGP_NODShiLtJ_T0093486.1 MGP_NODShiLtJ_G0034997.1 mouse_genomes_project 9 113335917 113373677 - MGP_NODShiLtJ_P0093486 1300017J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0093487.1 MGP_NODShiLtJ_G0034997.1 mouse_genomes_project 9 113337130 113351580 - MGP_NODShiLtJ_P0093487 1300017J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0093488.1 MGP_NODShiLtJ_G0034997.1 mouse_genomes_project 9 113356149 113373750 - 1300017J02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0093489.1 MGP_NODShiLtJ_G0034997.1 mouse_genomes_project 9 113368442 113389870 - MGP_NODShiLtJ_P0093489 1300017J02Rik protein_coding protein_coding MGP_NODShiLtJ_T0094071.1 MGP_NODShiLtJ_G0035092.1 mouse_genomes_project 9 118867329 118868229 + Gpx1 protein_coding retained_intron MGP_NODShiLtJ_T0094072.1 MGP_NODShiLtJ_G0035092.1 mouse_genomes_project 9 118867480 118868770 + MGP_NODShiLtJ_P0094072 Gpx1 protein_coding protein_coding MGP_NODShiLtJ_T0094073.1 MGP_NODShiLtJ_G0035092.1 mouse_genomes_project 9 118867669 118868677 + MGP_NODShiLtJ_P0094073 Gpx1 protein_coding protein_coding MGP_NODShiLtJ_T0094074.1 MGP_NODShiLtJ_G0035092.1 mouse_genomes_project 9 118867702 118868677 + MGP_NODShiLtJ_P0094074 Gpx1 protein_coding protein_coding MGP_NODShiLtJ_T0005488.1 MGP_NODShiLtJ_G0004626.1 mouse_genomes_project 9 121557104 121562550 - Gm42762 antisense antisense MGP_NODShiLtJ_T0092719.1 MGP_NODShiLtJ_G0034816.1 mouse_genomes_project 9 78750178 78776712 + MGP_NODShiLtJ_P0092719 Pygo1 protein_coding protein_coding MGP_NODShiLtJ_T0094644.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128139248 128871034 - MGP_NODShiLtJ_P0094644 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094645.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128143801 128871050 - MGP_NODShiLtJ_P0094645 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094646.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128144084 128414925 - MGP_NODShiLtJ_P0094646 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094647.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128144527 128870697 - MGP_NODShiLtJ_P0094647 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094648.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128144527 129279710 - MGP_NODShiLtJ_P0094648 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094649.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128144528 128870688 - MGP_NODShiLtJ_P0094649 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094650.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128145938 128871054 - MGP_NODShiLtJ_P0094650 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094651.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128150238 128414938 - MGP_NODShiLtJ_P0094651 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094652.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128258295 128871053 - Rbms3 protein_coding retained_intron MGP_NODShiLtJ_T0094653.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128394926 128870372 - MGP_NODShiLtJ_P0094653 Rbms3 protein_coding protein_coding MGP_NODShiLtJ_T0094654.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128443164 128871050 - Rbms3 protein_coding processed_transcript MGP_NODShiLtJ_T0094655.1 MGP_NODShiLtJ_G0035199.1 mouse_genomes_project 9 128542119 128870168 - Rbms3 protein_coding processed_transcript MGP_NODShiLtJ_T0091944.1 MGP_NODShiLtJ_G0034614.1 mouse_genomes_project 9 57714373 57768297 + MGP_NODShiLtJ_P0091944 Slc35f2 protein_coding protein_coding MGP_NODShiLtJ_T0100929.1 MGP_NODShiLtJ_G0039323.1 mouse_genomes_project 9 131976223 131976379 + Gm24044 snoRNA snoRNA MGP_NODShiLtJ_T0099629.1 MGP_NODShiLtJ_G0038023.1 mouse_genomes_project 9 96680608 96680724 - Gm22985 snRNA snRNA MGP_NODShiLtJ_T0090956.1 MGP_NODShiLtJ_G0034236.1 mouse_genomes_project 9 21274475 21282674 + MGP_NODShiLtJ_P0090956 Icam5 protein_coding protein_coding MGP_NODShiLtJ_T0091854.1 MGP_NODShiLtJ_G0034588.1 mouse_genomes_project 9 54450749 54457255 - MGP_NODShiLtJ_P0091854 1110032A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0091855.1 MGP_NODShiLtJ_G0034588.1 mouse_genomes_project 9 54453065 54455464 - MGP_NODShiLtJ_P0091855 1110032A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0091856.1 MGP_NODShiLtJ_G0034588.1 mouse_genomes_project 9 54453087 54464875 - 1110032A03Rik protein_coding retained_intron MGP_NODShiLtJ_T0091857.1 MGP_NODShiLtJ_G0034588.1 mouse_genomes_project 9 54453090 54453923 - 1110032A03Rik protein_coding retained_intron MGP_NODShiLtJ_T0091858.1 MGP_NODShiLtJ_G0034588.1 mouse_genomes_project 9 54453217 54457516 - MGP_NODShiLtJ_P0091858 1110032A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0091859.1 MGP_NODShiLtJ_G0034588.1 mouse_genomes_project 9 54454058 54457454 - 1110032A03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0091860.1 MGP_NODShiLtJ_G0034588.1 mouse_genomes_project 9 54454172 54457525 - 1110032A03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0091864.1 MGP_NODShiLtJ_G0034588.1 mouse_genomes_project 9 54457949 54460296 - 1110032A03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0016002.1 MGP_NODShiLtJ_G0014110.1 mouse_genomes_project 9 101515053 101515201 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094863.1 MGP_NODShiLtJ_G0035267.1 mouse_genomes_project 9 135012861 135083603 + MGP_NODShiLtJ_P0094863 Kif15 protein_coding protein_coding MGP_NODShiLtJ_T0093161.1 MGP_NODShiLtJ_G0034924.1 mouse_genomes_project 9 100002938 100010441 - MGP_NODShiLtJ_P0093161 Zic1 protein_coding protein_coding MGP_NODShiLtJ_T0093162.1 MGP_NODShiLtJ_G0034924.1 mouse_genomes_project 9 100005408 100010254 - MGP_NODShiLtJ_P0093162 Zic1 protein_coding protein_coding MGP_NODShiLtJ_T0093163.1 MGP_NODShiLtJ_G0034924.1 mouse_genomes_project 9 100006489 100007967 - Zic1 protein_coding processed_transcript MGP_NODShiLtJ_T0092877.1 MGP_NODShiLtJ_G0034858.1 mouse_genomes_project 9 84813820 84837361 + MGP_NODShiLtJ_P0092877 protein_coding protein_coding MGP_NODShiLtJ_T0092880.1 MGP_NODShiLtJ_G0034858.1 mouse_genomes_project 9 84821208 84836704 + protein_coding processed_transcript MGP_NODShiLtJ_T0005354.1 MGP_NODShiLtJ_G0004534.1 mouse_genomes_project 9 7271767 7298610 + Gm16833 antisense antisense MGP_NODShiLtJ_T0005355.1 MGP_NODShiLtJ_G0004534.1 mouse_genomes_project 9 7298409 7298610 + Gm16833 antisense antisense MGP_NODShiLtJ_T0090932.1 MGP_NODShiLtJ_G0034223.1 mouse_genomes_project 9 20867858 20885686 + MGP_NODShiLtJ_P0090932 Pin1 protein_coding protein_coding MGP_NODShiLtJ_T0016012.1 MGP_NODShiLtJ_G0014120.1 mouse_genomes_project 9 105710467 105710708 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093572.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115633958 115643869 + MGP_NODShiLtJ_P0093572 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0093573.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115634000 115640747 + protein_coding retained_intron MGP_NODShiLtJ_T0093574.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115634015 115644022 + protein_coding retained_intron MGP_NODShiLtJ_T0093575.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115634144 115640217 + MGP_NODShiLtJ_P0093575 protein_coding protein_coding MGP_NODShiLtJ_T0093576.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115635820 115643728 + MGP_NODShiLtJ_P0093576 protein_coding protein_coding MGP_NODShiLtJ_T0093577.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115636418 115643883 + MGP_NODShiLtJ_P0093577 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093578.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115636418 115649134 + MGP_NODShiLtJ_P0093578 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093579.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115639394 115643883 + protein_coding processed_transcript MGP_NODShiLtJ_T0093580.1 MGP_NODShiLtJ_G0035014.1 mouse_genomes_project 9 115640078 115644313 + MGP_NODShiLtJ_P0093580 protein_coding protein_coding MGP_NODShiLtJ_T0090642.1 MGP_NODShiLtJ_G0034106.1 mouse_genomes_project 9 149418 209638 + MGP_NODShiLtJ_P0090642 Alkbh8 protein_coding protein_coding MGP_NODShiLtJ_T0090643.1 MGP_NODShiLtJ_G0034106.1 mouse_genomes_project 9 161241 208430 + MGP_NODShiLtJ_P0090643 Alkbh8 protein_coding protein_coding MGP_NODShiLtJ_T0090885.1 MGP_NODShiLtJ_G0034213.1 mouse_genomes_project 9 20464559 20477755 + MGP_NODShiLtJ_P0090885 Olfr39 protein_coding protein_coding MGP_NODShiLtJ_T0002353.1 MGP_NODShiLtJ_G0002262.1 mouse_genomes_project 9 94780946 94783302 - TEC TEC MGP_NODShiLtJ_T0018404.1 MGP_NODShiLtJ_G0015619.1 mouse_genomes_project 9 104996247 104997541 - Gm16127 processed_transcript processed_transcript MGP_NODShiLtJ_T0093827.1 MGP_NODShiLtJ_G0035059.1 mouse_genomes_project 9 118030063 118034839 + MGP_NODShiLtJ_P0093827 Hyal1 protein_coding protein_coding MGP_NODShiLtJ_T0093828.1 MGP_NODShiLtJ_G0035059.1 mouse_genomes_project 9 118030074 118032695 + MGP_NODShiLtJ_P0093828 Hyal1 protein_coding protein_coding MGP_NODShiLtJ_T0093829.1 MGP_NODShiLtJ_G0035059.1 mouse_genomes_project 9 118030094 118034115 + MGP_NODShiLtJ_P0093829 Hyal1 protein_coding protein_coding MGP_NODShiLtJ_T0093830.1 MGP_NODShiLtJ_G0035059.1 mouse_genomes_project 9 118030126 118032551 + MGP_NODShiLtJ_P0093830 Hyal1 protein_coding protein_coding MGP_NODShiLtJ_T0093837.1 MGP_NODShiLtJ_G0035059.1 mouse_genomes_project 9 118032729 118034808 + Hyal1 protein_coding retained_intron MGP_NODShiLtJ_T0094819.1 MGP_NODShiLtJ_G0035247.1 mouse_genomes_project 9 133764484 133776194 + MGP_NODShiLtJ_P0094819 Zfp651 protein_coding protein_coding MGP_NODShiLtJ_T0090963.1 MGP_NODShiLtJ_G0034242.1 mouse_genomes_project 9 21418825 21472212 + MGP_NODShiLtJ_P0090963 Pde4a protein_coding protein_coding MGP_NODShiLtJ_T0090964.1 MGP_NODShiLtJ_G0034242.1 mouse_genomes_project 9 21439363 21470591 + Pde4a protein_coding retained_intron MGP_NODShiLtJ_T0090965.1 MGP_NODShiLtJ_G0034242.1 mouse_genomes_project 9 21441848 21451796 + Pde4a protein_coding retained_intron MGP_NODShiLtJ_T0090966.1 MGP_NODShiLtJ_G0034242.1 mouse_genomes_project 9 21441850 21470591 + MGP_NODShiLtJ_P0090966 Pde4a protein_coding protein_coding MGP_NODShiLtJ_T0090967.1 MGP_NODShiLtJ_G0034242.1 mouse_genomes_project 9 21450494 21453058 + Pde4a protein_coding retained_intron MGP_NODShiLtJ_T0090968.1 MGP_NODShiLtJ_G0034242.1 mouse_genomes_project 9 21455009 21470591 + MGP_NODShiLtJ_P0090968 Pde4a protein_coding protein_coding MGP_NODShiLtJ_T0092633.1 MGP_NODShiLtJ_G0034807.1 mouse_genomes_project 9 77125205 77222748 - Myzap protein_coding retained_intron MGP_NODShiLtJ_T0092634.1 MGP_NODShiLtJ_G0034807.1 mouse_genomes_project 9 77125205 77222748 - MGP_NODShiLtJ_P0092634 Myzap protein_coding protein_coding MGP_NODShiLtJ_T0092635.1 MGP_NODShiLtJ_G0034807.1 mouse_genomes_project 9 77125917 77222653 - MGP_NODShiLtJ_P0092635 Myzap protein_coding protein_coding MGP_NODShiLtJ_T0092636.1 MGP_NODShiLtJ_G0034807.1 mouse_genomes_project 9 77191198 77210293 - MGP_NODShiLtJ_P0092636 Myzap protein_coding protein_coding MGP_NODShiLtJ_T0092637.1 MGP_NODShiLtJ_G0034807.1 mouse_genomes_project 9 77194790 77222730 - MGP_NODShiLtJ_P0092637 Myzap protein_coding protein_coding MGP_NODShiLtJ_T0091377.1 MGP_NODShiLtJ_G0034387.1 mouse_genomes_project 9 40236724 40237669 + MGP_NODShiLtJ_P0091377 Olfr888 protein_coding protein_coding MGP_NODShiLtJ_T0093640.1 MGP_NODShiLtJ_G0035025.1 mouse_genomes_project 9 116539399 116554632 - MGP_NODShiLtJ_P0093640 Alas1 protein_coding protein_coding MGP_NODShiLtJ_T0093641.1 MGP_NODShiLtJ_G0035025.1 mouse_genomes_project 9 116539402 116555028 - MGP_NODShiLtJ_P0093641 Alas1 protein_coding protein_coding MGP_NODShiLtJ_T0093642.1 MGP_NODShiLtJ_G0035025.1 mouse_genomes_project 9 116539887 116554758 - MGP_NODShiLtJ_P0093642 Alas1 protein_coding protein_coding MGP_NODShiLtJ_T0093643.1 MGP_NODShiLtJ_G0035025.1 mouse_genomes_project 9 116539902 116549621 - Alas1 protein_coding processed_transcript MGP_NODShiLtJ_T0093644.1 MGP_NODShiLtJ_G0035025.1 mouse_genomes_project 9 116540155 116544736 - MGP_NODShiLtJ_P0093644 Alas1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093645.1 MGP_NODShiLtJ_G0035025.1 mouse_genomes_project 9 116541406 116543089 - Alas1 protein_coding retained_intron MGP_NODShiLtJ_T0093646.1 MGP_NODShiLtJ_G0035025.1 mouse_genomes_project 9 116542682 116546037 - Alas1 protein_coding retained_intron MGP_NODShiLtJ_T0093647.1 MGP_NODShiLtJ_G0035025.1 mouse_genomes_project 9 116544821 116554754 - MGP_NODShiLtJ_P0093647 Alas1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015984.1 MGP_NODShiLtJ_G0014092.1 mouse_genomes_project 9 95869460 95869962 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094799.1 MGP_NODShiLtJ_G0035244.1 mouse_genomes_project 9 133671606 133698305 - MGP_NODShiLtJ_P0094799 Sec22c protein_coding protein_coding MGP_NODShiLtJ_T0094800.1 MGP_NODShiLtJ_G0035244.1 mouse_genomes_project 9 133675589 133698741 - MGP_NODShiLtJ_P0094800 Sec22c protein_coding protein_coding MGP_NODShiLtJ_T0094801.1 MGP_NODShiLtJ_G0035244.1 mouse_genomes_project 9 133677118 133698255 - MGP_NODShiLtJ_P0094801 Sec22c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094802.1 MGP_NODShiLtJ_G0035244.1 mouse_genomes_project 9 133680823 133683097 - Sec22c protein_coding retained_intron MGP_NODShiLtJ_T0094803.1 MGP_NODShiLtJ_G0035244.1 mouse_genomes_project 9 133688239 133698766 - MGP_NODShiLtJ_P0094803 Sec22c protein_coding protein_coding MGP_NODShiLtJ_T0099586.1 MGP_NODShiLtJ_G0037980.1 mouse_genomes_project 9 18156150 18156252 + Gm24546 snRNA snRNA MGP_NODShiLtJ_T0092395.1 MGP_NODShiLtJ_G0034741.1 mouse_genomes_project 9 69822857 69950853 + MGP_NODShiLtJ_P0092395 Dennd4a protein_coding protein_coding MGP_NODShiLtJ_T0093311.1 MGP_NODShiLtJ_G0034956.1 mouse_genomes_project 9 108114301 108137868 + MGP_NODShiLtJ_P0093311 Rbp2 protein_coding protein_coding MGP_NODShiLtJ_T0093312.1 MGP_NODShiLtJ_G0034956.1 mouse_genomes_project 9 108114352 108137736 + MGP_NODShiLtJ_P0093312 Rbp2 protein_coding protein_coding MGP_NODShiLtJ_T0093313.1 MGP_NODShiLtJ_G0034956.1 mouse_genomes_project 9 108118726 108137858 + MGP_NODShiLtJ_P0093313 Rbp2 protein_coding protein_coding MGP_NODShiLtJ_T0093314.1 MGP_NODShiLtJ_G0034956.1 mouse_genomes_project 9 108119886 108127070 + Rbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0094715.1 MGP_NODShiLtJ_G0035216.1 mouse_genomes_project 9 131120927 131124004 + MGP_NODShiLtJ_P0094715 protein_coding protein_coding MGP_NODShiLtJ_T0094717.1 MGP_NODShiLtJ_G0035216.1 mouse_genomes_project 9 131122665 131131237 + protein_coding retained_intron MGP_NODShiLtJ_T0094718.1 MGP_NODShiLtJ_G0035216.1 mouse_genomes_project 9 131122766 131125542 + MGP_NODShiLtJ_P0094718 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094719.1 MGP_NODShiLtJ_G0035216.1 mouse_genomes_project 9 131127149 131129807 + protein_coding retained_intron MGP_NODShiLtJ_T0094622.1 MGP_NODShiLtJ_G0035188.1 mouse_genomes_project 9 125883910 125884638 + MGP_NODShiLtJ_P0094622 protein_coding protein_coding MGP_NODShiLtJ_T0100870.1 MGP_NODShiLtJ_G0039264.1 mouse_genomes_project 9 21121286 21121366 + Gm23008 snoRNA snoRNA MGP_NODShiLtJ_T0093410.1 MGP_NODShiLtJ_G0034981.1 mouse_genomes_project 9 110927336 110990768 - MGP_NODShiLtJ_P0093410 Pccb protein_coding protein_coding MGP_NODShiLtJ_T0093411.1 MGP_NODShiLtJ_G0034981.1 mouse_genomes_project 9 110927336 110990747 - MGP_NODShiLtJ_P0093411 Pccb protein_coding protein_coding MGP_NODShiLtJ_T0093412.1 MGP_NODShiLtJ_G0034981.1 mouse_genomes_project 9 110929670 110930945 - Pccb protein_coding retained_intron MGP_NODShiLtJ_T0093413.1 MGP_NODShiLtJ_G0034981.1 mouse_genomes_project 9 110944619 110990699 - MGP_NODShiLtJ_P0093413 Pccb protein_coding protein_coding MGP_NODShiLtJ_T0093414.1 MGP_NODShiLtJ_G0034981.1 mouse_genomes_project 9 110965586 110990686 - Pccb protein_coding processed_transcript MGP_NODShiLtJ_T0093415.1 MGP_NODShiLtJ_G0034981.1 mouse_genomes_project 9 110977058 110990751 - MGP_NODShiLtJ_P0093415 Pccb protein_coding protein_coding MGP_NODShiLtJ_T0092723.1 MGP_NODShiLtJ_G0034819.1 mouse_genomes_project 9 78801820 78809906 - MGP_NODShiLtJ_P0092723 Ccpg1os protein_coding protein_coding MGP_NODShiLtJ_T0092724.1 MGP_NODShiLtJ_G0034819.1 mouse_genomes_project 9 78808177 78809912 - Ccpg1os protein_coding retained_intron MGP_NODShiLtJ_T0015986.1 MGP_NODShiLtJ_G0014094.1 mouse_genomes_project 9 96234840 96236309 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093125.1 MGP_NODShiLtJ_G0034919.1 mouse_genomes_project 9 98222189 98228143 + MGP_NODShiLtJ_P0093125 Rasgrf1 protein_coding protein_coding MGP_NODShiLtJ_T0093126.1 MGP_NODShiLtJ_G0034919.1 mouse_genomes_project 9 98222190 98228130 + MGP_NODShiLtJ_P0093126 Rasgrf1 protein_coding protein_coding MGP_NODShiLtJ_T0093127.1 MGP_NODShiLtJ_G0034919.1 mouse_genomes_project 9 98222190 98344677 + MGP_NODShiLtJ_P0093127 Rasgrf1 protein_coding protein_coding MGP_NODShiLtJ_T0093128.1 MGP_NODShiLtJ_G0034919.1 mouse_genomes_project 9 98222193 98238998 + Rasgrf1 protein_coding retained_intron MGP_NODShiLtJ_T0015951.1 MGP_NODShiLtJ_G0014059.1 mouse_genomes_project 9 78893749 78894056 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098103.1 MGP_NODShiLtJ_G0036515.1 mouse_genomes_project 9 36607016 36607146 + Gm23702 rRNA rRNA MGP_NODShiLtJ_T0002320.1 MGP_NODShiLtJ_G0002230.1 mouse_genomes_project 9 77668371 77671554 - TEC TEC MGP_NODShiLtJ_T0005417.1 MGP_NODShiLtJ_G0004576.1 mouse_genomes_project 9 78403503 78404331 - Gm27232 antisense antisense MGP_NODShiLtJ_T0094217.1 MGP_NODShiLtJ_G0035112.1 mouse_genomes_project 9 119397419 119407926 + MGP_NODShiLtJ_P0094217 Nckipsd protein_coding protein_coding MGP_NODShiLtJ_T0094218.1 MGP_NODShiLtJ_G0035112.1 mouse_genomes_project 9 119397424 119400201 + MGP_NODShiLtJ_P0094218 Nckipsd protein_coding protein_coding MGP_NODShiLtJ_T0094219.1 MGP_NODShiLtJ_G0035112.1 mouse_genomes_project 9 119397472 119400685 + MGP_NODShiLtJ_P0094219 Nckipsd protein_coding protein_coding MGP_NODShiLtJ_T0094220.1 MGP_NODShiLtJ_G0035112.1 mouse_genomes_project 9 119401004 119403161 + MGP_NODShiLtJ_P0094220 Nckipsd protein_coding protein_coding MGP_NODShiLtJ_T0094221.1 MGP_NODShiLtJ_G0035112.1 mouse_genomes_project 9 119402507 119403406 + Nckipsd protein_coding retained_intron MGP_NODShiLtJ_T0094222.1 MGP_NODShiLtJ_G0035112.1 mouse_genomes_project 9 119403915 119405201 + Nckipsd protein_coding retained_intron MGP_NODShiLtJ_T0092284.1 MGP_NODShiLtJ_G0034715.1 mouse_genomes_project 9 66724275 66801827 - Paqr5 protein_coding processed_transcript MGP_NODShiLtJ_T0092285.1 MGP_NODShiLtJ_G0034715.1 mouse_genomes_project 9 66724532 66801882 - MGP_NODShiLtJ_P0092285 Paqr5 protein_coding protein_coding MGP_NODShiLtJ_T0092286.1 MGP_NODShiLtJ_G0034715.1 mouse_genomes_project 9 66726836 66747289 - MGP_NODShiLtJ_P0092286 Paqr5 protein_coding protein_coding MGP_NODShiLtJ_T0002393.1 MGP_NODShiLtJ_G0002302.1 mouse_genomes_project 9 112745884 112748707 - TEC TEC MGP_NODShiLtJ_T0009274.1 MGP_NODShiLtJ_G0007443.1 mouse_genomes_project 9 134317374 134322341 - Gm26797 lincRNA lincRNA MGP_NODShiLtJ_T0092017.1 MGP_NODShiLtJ_G0034640.1 mouse_genomes_project 9 59530350 59591055 - MGP_NODShiLtJ_P0092017 Etfa protein_coding protein_coding MGP_NODShiLtJ_T0092018.1 MGP_NODShiLtJ_G0034640.1 mouse_genomes_project 9 59551696 59565569 - Etfa protein_coding processed_transcript MGP_NODShiLtJ_T0092019.1 MGP_NODShiLtJ_G0034640.1 mouse_genomes_project 9 59564792 59590932 - Etfa protein_coding processed_transcript MGP_NODShiLtJ_T0092020.1 MGP_NODShiLtJ_G0034640.1 mouse_genomes_project 9 59566881 59590620 - Etfa protein_coding processed_transcript MGP_NODShiLtJ_T0010969.1 MGP_NODShiLtJ_G0009102.1 mouse_genomes_project 9 73056331 73056395 - Mir7241 miRNA miRNA MGP_NODShiLtJ_T0002397.1 MGP_NODShiLtJ_G0002306.1 mouse_genomes_project 9 113645073 113647215 - TEC TEC MGP_NODShiLtJ_T0002401.1 MGP_NODShiLtJ_G0002310.1 mouse_genomes_project 9 114437341 114440325 - TEC TEC MGP_NODShiLtJ_T0005375.1 MGP_NODShiLtJ_G0004550.1 mouse_genomes_project 9 48467855 48470020 + Gm17099 antisense antisense MGP_NODShiLtJ_T0093740.1 MGP_NODShiLtJ_G0035045.1 mouse_genomes_project 9 117242108 117250270 - MGP_NODShiLtJ_P0093740 Rbm15b protein_coding protein_coding MGP_NODShiLtJ_T0093741.1 MGP_NODShiLtJ_G0035045.1 mouse_genomes_project 9 117247374 117248243 - MGP_NODShiLtJ_P0093741 Rbm15b protein_coding protein_coding MGP_NODShiLtJ_T0093097.1 MGP_NODShiLtJ_G0034906.1 mouse_genomes_project 9 96581014 96624544 - MGP_NODShiLtJ_P0093097 protein_coding protein_coding MGP_NODShiLtJ_T0093098.1 MGP_NODShiLtJ_G0034906.1 mouse_genomes_project 9 96587778 96622705 - MGP_NODShiLtJ_P0093098 protein_coding protein_coding MGP_NODShiLtJ_T0093099.1 MGP_NODShiLtJ_G0034906.1 mouse_genomes_project 9 96587980 96624077 - MGP_NODShiLtJ_P0093099 protein_coding protein_coding MGP_NODShiLtJ_T0093100.1 MGP_NODShiLtJ_G0034906.1 mouse_genomes_project 9 96588029 96624142 - MGP_NODShiLtJ_P0093100 protein_coding protein_coding MGP_NODShiLtJ_T0093101.1 MGP_NODShiLtJ_G0034906.1 mouse_genomes_project 9 96589278 96624095 - MGP_NODShiLtJ_P0093101 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093102.1 MGP_NODShiLtJ_G0034906.1 mouse_genomes_project 9 96591444 96622693 - MGP_NODShiLtJ_P0093102 protein_coding protein_coding MGP_NODShiLtJ_T0093103.1 MGP_NODShiLtJ_G0034906.1 mouse_genomes_project 9 96619166 96623164 - protein_coding retained_intron MGP_NODShiLtJ_T0091211.1 MGP_NODShiLtJ_G0034328.1 mouse_genomes_project 9 36758541 36813655 - MGP_NODShiLtJ_P0091211 Dcps protein_coding protein_coding MGP_NODShiLtJ_T0091212.1 MGP_NODShiLtJ_G0034328.1 mouse_genomes_project 9 36758545 36813653 - MGP_NODShiLtJ_P0091212 Dcps protein_coding protein_coding MGP_NODShiLtJ_T0091213.1 MGP_NODShiLtJ_G0034328.1 mouse_genomes_project 9 36760440 36813587 - MGP_NODShiLtJ_P0091213 Dcps protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009250.1 MGP_NODShiLtJ_G0007426.1 mouse_genomes_project 9 118049068 118053373 - Lsmem2 lincRNA lincRNA MGP_NODShiLtJ_T0093279.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106329406 106398671 - MGP_NODShiLtJ_P0093279 Pxylp1 protein_coding protein_coding MGP_NODShiLtJ_T0093280.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106329414 106398687 - MGP_NODShiLtJ_P0093280 Pxylp1 protein_coding protein_coding MGP_NODShiLtJ_T0093281.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106329414 106398732 - MGP_NODShiLtJ_P0093281 Pxylp1 protein_coding protein_coding MGP_NODShiLtJ_T0093282.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106329656 106398691 - MGP_NODShiLtJ_P0093282 Pxylp1 protein_coding protein_coding MGP_NODShiLtJ_T0093283.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106331486 106398686 - MGP_NODShiLtJ_P0093283 Pxylp1 protein_coding protein_coding MGP_NODShiLtJ_T0093284.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106331657 106372182 - MGP_NODShiLtJ_P0093284 Pxylp1 protein_coding protein_coding MGP_NODShiLtJ_T0093285.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106346402 106364201 - Pxylp1 protein_coding processed_transcript MGP_NODShiLtJ_T0093286.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106346512 106401927 - MGP_NODShiLtJ_P0093286 Pxylp1 protein_coding protein_coding MGP_NODShiLtJ_T0093287.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106347201 106398678 - Pxylp1 protein_coding retained_intron MGP_NODShiLtJ_T0093288.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106347318 106372259 - MGP_NODShiLtJ_P0093288 Pxylp1 protein_coding protein_coding MGP_NODShiLtJ_T0093289.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106365746 106372261 - Pxylp1 protein_coding processed_transcript MGP_NODShiLtJ_T0093290.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106370081 106401348 - Pxylp1 protein_coding processed_transcript MGP_NODShiLtJ_T0093291.1 MGP_NODShiLtJ_G0034948.1 mouse_genomes_project 9 106396888 106398691 - Pxylp1 protein_coding retained_intron MGP_NODShiLtJ_T0091747.1 MGP_NODShiLtJ_G0034550.1 mouse_genomes_project 9 49614623 49617910 + MGP_NODShiLtJ_P0091747 Apoa5 protein_coding protein_coding MGP_NODShiLtJ_T0091748.1 MGP_NODShiLtJ_G0034550.1 mouse_genomes_project 9 49615068 49617910 + MGP_NODShiLtJ_P0091748 Apoa5 protein_coding protein_coding MGP_NODShiLtJ_T0094345.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120734008 120909997 + MGP_NODShiLtJ_P0094345 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094346.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120734348 120823525 + MGP_NODShiLtJ_P0094346 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094347.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120734412 120909989 + MGP_NODShiLtJ_P0094347 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094348.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120780576 120821036 + Map4 protein_coding processed_transcript MGP_NODShiLtJ_T0094349.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120859868 120897625 + MGP_NODShiLtJ_P0094349 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094350.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120875974 120909988 + MGP_NODShiLtJ_P0094350 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094351.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120875978 120909215 + MGP_NODShiLtJ_P0094351 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094352.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120875996 120909995 + MGP_NODShiLtJ_P0094352 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094353.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120887351 120893672 + Map4 protein_coding processed_transcript MGP_NODShiLtJ_T0094354.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120892446 120908129 + MGP_NODShiLtJ_P0094354 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094355.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120892446 120908539 + MGP_NODShiLtJ_P0094355 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094356.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120893743 120907837 + MGP_NODShiLtJ_P0094356 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094357.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120893767 120907956 + MGP_NODShiLtJ_P0094357 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094358.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120903601 120906077 + Map4 protein_coding retained_intron MGP_NODShiLtJ_T0094359.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120904050 120908192 + MGP_NODShiLtJ_P0094359 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0094360.1 MGP_NODShiLtJ_G0035137.1 mouse_genomes_project 9 120905841 120908539 + MGP_NODShiLtJ_P0094360 Map4 protein_coding protein_coding MGP_NODShiLtJ_T0092343.1 MGP_NODShiLtJ_G0034732.1 mouse_genomes_project 9 69046159 69070141 + MGP_NODShiLtJ_P0092343 Lctl protein_coding protein_coding MGP_NODShiLtJ_T0092344.1 MGP_NODShiLtJ_G0034732.1 mouse_genomes_project 9 69046184 69047148 + Lctl protein_coding retained_intron MGP_NODShiLtJ_T0092345.1 MGP_NODShiLtJ_G0034732.1 mouse_genomes_project 9 69046241 69047024 + Lctl protein_coding processed_transcript MGP_NODShiLtJ_T0092346.1 MGP_NODShiLtJ_G0034732.1 mouse_genomes_project 9 69046271 69070137 + MGP_NODShiLtJ_P0092346 Lctl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092347.1 MGP_NODShiLtJ_G0034732.1 mouse_genomes_project 9 69050590 69070128 + MGP_NODShiLtJ_P0092347 Lctl protein_coding protein_coding MGP_NODShiLtJ_T0092348.1 MGP_NODShiLtJ_G0034732.1 mouse_genomes_project 9 69051022 69055926 + Lctl protein_coding retained_intron MGP_NODShiLtJ_T0091528.1 MGP_NODShiLtJ_G0034484.1 mouse_genomes_project 9 46895430 46961949 + MGP_NODShiLtJ_P0091528 Nectin1 protein_coding protein_coding MGP_NODShiLtJ_T0009242.1 MGP_NODShiLtJ_G0007420.1 mouse_genomes_project 9 112822295 112822555 - Gm28621 lincRNA lincRNA MGP_NODShiLtJ_T0090766.1 MGP_NODShiLtJ_G0034149.1 mouse_genomes_project 9 13182494 13236098 + MGP_NODShiLtJ_P0090766 Sesn3 protein_coding protein_coding MGP_NODShiLtJ_T0092638.1 MGP_NODShiLtJ_G0034808.1 mouse_genomes_project 9 77256968 77408320 - MGP_NODShiLtJ_P0092638 Cgnl1 protein_coding protein_coding MGP_NODShiLtJ_T0092639.1 MGP_NODShiLtJ_G0034808.1 mouse_genomes_project 9 77256968 77408320 - MGP_NODShiLtJ_P0092639 Cgnl1 protein_coding protein_coding MGP_NODShiLtJ_T0092640.1 MGP_NODShiLtJ_G0034808.1 mouse_genomes_project 9 77259317 77261567 - Cgnl1 protein_coding retained_intron MGP_NODShiLtJ_T0092641.1 MGP_NODShiLtJ_G0034808.1 mouse_genomes_project 9 77259669 77408278 - MGP_NODShiLtJ_P0092641 Cgnl1 protein_coding protein_coding MGP_NODShiLtJ_T0092642.1 MGP_NODShiLtJ_G0034808.1 mouse_genomes_project 9 77260793 77261788 - Cgnl1 protein_coding retained_intron MGP_NODShiLtJ_T0092643.1 MGP_NODShiLtJ_G0034808.1 mouse_genomes_project 9 77263061 77278807 - Cgnl1 protein_coding processed_transcript MGP_NODShiLtJ_T0016042.1 MGP_NODShiLtJ_G0014150.1 mouse_genomes_project 9 118859248 118859612 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091521.1 MGP_NODShiLtJ_G0034479.1 mouse_genomes_project 9 46210418 46217987 - MGP_NODShiLtJ_P0091521 Tmem136 protein_coding protein_coding MGP_NODShiLtJ_T0092198.1 MGP_NODShiLtJ_G0034693.1 mouse_genomes_project 9 63263897 63301994 + MGP_NODShiLtJ_P0092198 Hcn4 protein_coding protein_coding MGP_NODShiLtJ_T0100915.1 MGP_NODShiLtJ_G0039309.1 mouse_genomes_project 9 109725794 109725928 + Gm23594 snoRNA snoRNA MGP_NODShiLtJ_T0015905.1 MGP_NODShiLtJ_G0014013.1 mouse_genomes_project 9 16191954 16192773 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0090862.1 MGP_NODShiLtJ_G0034190.1 mouse_genomes_project 9 18728349 18729304 + MGP_NODShiLtJ_P0090862 Olfr836 protein_coding protein_coding MGP_NODShiLtJ_T0091059.1 MGP_NODShiLtJ_G0034276.1 mouse_genomes_project 9 22483768 22494091 + MGP_NODShiLtJ_P0091059 Cnn1 protein_coding protein_coding MGP_NODShiLtJ_T0094075.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118877148 118923113 + MGP_NODShiLtJ_P0094075 Usp4 protein_coding protein_coding MGP_NODShiLtJ_T0094076.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118877169 118916487 + MGP_NODShiLtJ_P0094076 Usp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094077.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118877192 118887106 + Usp4 protein_coding retained_intron MGP_NODShiLtJ_T0094078.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118877208 118923088 + MGP_NODShiLtJ_P0094078 Usp4 protein_coding protein_coding MGP_NODShiLtJ_T0094079.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118885763 118887221 + Usp4 protein_coding processed_transcript MGP_NODShiLtJ_T0094080.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118889875 118892894 + Usp4 protein_coding retained_intron MGP_NODShiLtJ_T0094081.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118897952 118900273 + Usp4 protein_coding retained_intron MGP_NODShiLtJ_T0094082.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118902723 118922827 + MGP_NODShiLtJ_P0094082 Usp4 protein_coding protein_coding MGP_NODShiLtJ_T0094083.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118911906 118922360 + MGP_NODShiLtJ_P0094083 Usp4 protein_coding protein_coding MGP_NODShiLtJ_T0094084.1 MGP_NODShiLtJ_G0035093.1 mouse_genomes_project 9 118921443 118922813 + Usp4 protein_coding retained_intron MGP_NODShiLtJ_T0016009.1 MGP_NODShiLtJ_G0014117.1 mouse_genomes_project 9 104754397 104755127 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009177.1 MGP_NODShiLtJ_G0007368.1 mouse_genomes_project 9 68975451 68979504 + 1110036E04Rik lincRNA lincRNA MGP_NODShiLtJ_T0092415.1 MGP_NODShiLtJ_G0034753.1 mouse_genomes_project 9 70457807 70460776 - MGP_NODShiLtJ_P0092415 Kbtbd13 protein_coding protein_coding MGP_NODShiLtJ_T0092365.1 MGP_NODShiLtJ_G0034736.1 mouse_genomes_project 9 69131389 69205458 - MGP_NODShiLtJ_P0092365 Map2k1 protein_coding protein_coding MGP_NODShiLtJ_T0092366.1 MGP_NODShiLtJ_G0034736.1 mouse_genomes_project 9 69132148 69133479 - Map2k1 protein_coding retained_intron MGP_NODShiLtJ_T0092367.1 MGP_NODShiLtJ_G0034736.1 mouse_genomes_project 9 69132356 69133871 - Map2k1 protein_coding retained_intron MGP_NODShiLtJ_T0092368.1 MGP_NODShiLtJ_G0034736.1 mouse_genomes_project 9 69132902 69141280 - Map2k1 protein_coding processed_transcript MGP_NODShiLtJ_T0091984.1 MGP_NODShiLtJ_G0034631.1 mouse_genomes_project 9 58981745 58982502 - MGP_NODShiLtJ_P0091984 AY074887 protein_coding protein_coding MGP_NODShiLtJ_T0009155.1 MGP_NODShiLtJ_G0007351.1 mouse_genomes_project 9 47692077 47693888 + C030014I23Rik lincRNA lincRNA MGP_NODShiLtJ_T0009156.1 MGP_NODShiLtJ_G0007351.1 mouse_genomes_project 9 47692931 47696338 + C030014I23Rik lincRNA lincRNA MGP_NODShiLtJ_T0002327.1 MGP_NODShiLtJ_G0002237.1 mouse_genomes_project 9 78376592 78378709 + TEC TEC MGP_NODShiLtJ_T0091491.1 MGP_NODShiLtJ_G0034469.1 mouse_genomes_project 9 43807192 43811081 + MGP_NODShiLtJ_P0091491 Bsx protein_coding protein_coding MGP_NODShiLtJ_T0011622.1 MGP_NODShiLtJ_G0009755.1 mouse_genomes_project 9 18030087 18030393 + Gm25295 misc_RNA misc_RNA MGP_NODShiLtJ_T0099582.1 MGP_NODShiLtJ_G0037976.1 mouse_genomes_project 9 218535 218639 + Gm23275 snRNA snRNA MGP_NODShiLtJ_T0092522.1 MGP_NODShiLtJ_G0034781.1 mouse_genomes_project 9 72236325 72257653 - MGP_NODShiLtJ_P0092522 Lactb protein_coding protein_coding MGP_NODShiLtJ_T0092414.1 MGP_NODShiLtJ_G0034752.1 mouse_genomes_project 9 70427182 70447590 + MGP_NODShiLtJ_P0092414 Ubap1l protein_coding protein_coding MGP_NODShiLtJ_T0093388.1 MGP_NODShiLtJ_G0034978.1 mouse_genomes_project 9 110352433 110412696 - MGP_NODShiLtJ_P0093388 Nck1 protein_coding protein_coding MGP_NODShiLtJ_T0093389.1 MGP_NODShiLtJ_G0034978.1 mouse_genomes_project 9 110355141 110372039 - MGP_NODShiLtJ_P0093389 Nck1 protein_coding protein_coding MGP_NODShiLtJ_T0093390.1 MGP_NODShiLtJ_G0034978.1 mouse_genomes_project 9 110359056 110412684 - MGP_NODShiLtJ_P0093390 Nck1 protein_coding protein_coding MGP_NODShiLtJ_T0093391.1 MGP_NODShiLtJ_G0034978.1 mouse_genomes_project 9 110359279 110412293 - MGP_NODShiLtJ_P0093391 Nck1 protein_coding protein_coding MGP_NODShiLtJ_T0011627.1 MGP_NODShiLtJ_G0009760.1 mouse_genomes_project 9 58545111 58545329 + Gm25980 misc_RNA misc_RNA MGP_NODShiLtJ_T0092211.1 MGP_NODShiLtJ_G0034699.1 mouse_genomes_project 9 64096597 64126155 + MGP_NODShiLtJ_P0092211 Hexa protein_coding protein_coding MGP_NODShiLtJ_T0092323.1 MGP_NODShiLtJ_G0034726.1 mouse_genomes_project 9 68029663 68248081 - MGP_NODShiLtJ_P0092323 Map2k5 protein_coding protein_coding MGP_NODShiLtJ_T0099590.1 MGP_NODShiLtJ_G0037984.1 mouse_genomes_project 9 23256778 23256863 - Gm27639 snRNA snRNA MGP_NODShiLtJ_T0090784.1 MGP_NODShiLtJ_G0034157.1 mouse_genomes_project 9 13728636 13731392 - MGP_NODShiLtJ_P0090784 Ankrd49 protein_coding protein_coding MGP_NODShiLtJ_T0091495.1 MGP_NODShiLtJ_G0034471.1 mouse_genomes_project 9 43905294 43944851 - MGP_NODShiLtJ_P0091495 Crtam protein_coding protein_coding MGP_NODShiLtJ_T0091496.1 MGP_NODShiLtJ_G0034471.1 mouse_genomes_project 9 43905295 43944866 - MGP_NODShiLtJ_P0091496 Crtam protein_coding protein_coding MGP_NODShiLtJ_T0091497.1 MGP_NODShiLtJ_G0034471.1 mouse_genomes_project 9 43905300 43916877 - MGP_NODShiLtJ_P0091497 Crtam protein_coding protein_coding MGP_NODShiLtJ_T0091498.1 MGP_NODShiLtJ_G0034471.1 mouse_genomes_project 9 43905302 43944859 - MGP_NODShiLtJ_P0091498 Crtam protein_coding protein_coding MGP_NODShiLtJ_T0099622.1 MGP_NODShiLtJ_G0038016.1 mouse_genomes_project 9 78794699 78794806 + Gm23567 snRNA snRNA MGP_NODShiLtJ_T0094861.1 MGP_NODShiLtJ_G0035266.1 mouse_genomes_project 9 135006865 135012781 - MGP_NODShiLtJ_P0094861 1110059G10Rik protein_coding protein_coding MGP_NODShiLtJ_T0094862.1 MGP_NODShiLtJ_G0035266.1 mouse_genomes_project 9 135009311 135012734 - MGP_NODShiLtJ_P0094862 1110059G10Rik protein_coding protein_coding MGP_NODShiLtJ_T0018390.1 MGP_NODShiLtJ_G0015613.1 mouse_genomes_project 9 86699223 86708818 + 4930429F24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0018388.1 MGP_NODShiLtJ_G0015612.1 mouse_genomes_project 9 84047858 84049367 + Gm19569 processed_transcript lincRNA MGP_NODShiLtJ_T0018389.1 MGP_NODShiLtJ_G0015612.1 mouse_genomes_project 9 84048101 84049367 + Gm19569 processed_transcript retained_intron MGP_NODShiLtJ_T0091866.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54464370 54543417 + MGP_NODShiLtJ_P0091866 Alg9 protein_coding protein_coding MGP_NODShiLtJ_T0091867.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54464656 54543431 + MGP_NODShiLtJ_P0091867 Alg9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091868.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54464718 54478865 + MGP_NODShiLtJ_P0091868 Alg9 protein_coding protein_coding MGP_NODShiLtJ_T0091869.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54464900 54472698 + Alg9 protein_coding processed_transcript MGP_NODShiLtJ_T0091870.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54465462 54468436 + Alg9 protein_coding processed_transcript MGP_NODShiLtJ_T0091871.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54492034 54542652 + MGP_NODShiLtJ_P0091871 Alg9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091872.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54500986 54543251 + MGP_NODShiLtJ_P0091872 Alg9 protein_coding protein_coding MGP_NODShiLtJ_T0091873.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54518405 54542860 + Alg9 protein_coding processed_transcript MGP_NODShiLtJ_T0091874.1 MGP_NODShiLtJ_G0034590.1 mouse_genomes_project 9 54535463 54542980 + Alg9 protein_coding processed_transcript MGP_NODShiLtJ_T0090659.1 MGP_NODShiLtJ_G0034115.1 mouse_genomes_project 9 2739558 2769398 + MGP_NODShiLtJ_P0090659 Casp12 protein_coding protein_coding MGP_NODShiLtJ_T0090660.1 MGP_NODShiLtJ_G0034115.1 mouse_genomes_project 9 2739604 2769247 + MGP_NODShiLtJ_P0090660 Casp12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090661.1 MGP_NODShiLtJ_G0034115.1 mouse_genomes_project 9 2739607 2748490 + Casp12 protein_coding retained_intron MGP_NODShiLtJ_T0090662.1 MGP_NODShiLtJ_G0034115.1 mouse_genomes_project 9 2739624 2749493 + Casp12 protein_coding retained_intron MGP_NODShiLtJ_T0090663.1 MGP_NODShiLtJ_G0034115.1 mouse_genomes_project 9 2739632 2754346 + MGP_NODShiLtJ_P0090663 Casp12 protein_coding protein_coding MGP_NODShiLtJ_T0093445.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112767599 112771642 + MGP_NODShiLtJ_P0093445 Amotl2 protein_coding protein_coding MGP_NODShiLtJ_T0093446.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112767729 112784333 + MGP_NODShiLtJ_P0093446 Amotl2 protein_coding protein_coding MGP_NODShiLtJ_T0093447.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112768216 112771654 + MGP_NODShiLtJ_P0093447 Amotl2 protein_coding protein_coding MGP_NODShiLtJ_T0093448.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112768595 112784338 + MGP_NODShiLtJ_P0093448 Amotl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093449.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112768602 112784341 + MGP_NODShiLtJ_P0093449 Amotl2 protein_coding protein_coding MGP_NODShiLtJ_T0093450.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112769356 112771313 + MGP_NODShiLtJ_P0093450 Amotl2 protein_coding protein_coding MGP_NODShiLtJ_T0093451.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112769397 112771321 + MGP_NODShiLtJ_P0093451 Amotl2 protein_coding protein_coding MGP_NODShiLtJ_T0093452.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112769412 112771133 + MGP_NODShiLtJ_P0093452 Amotl2 protein_coding protein_coding MGP_NODShiLtJ_T0093453.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112769495 112779422 + MGP_NODShiLtJ_P0093453 Amotl2 protein_coding protein_coding MGP_NODShiLtJ_T0093454.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112773223 112779245 + Amotl2 protein_coding processed_transcript MGP_NODShiLtJ_T0093455.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112773441 112784338 + Amotl2 protein_coding retained_intron MGP_NODShiLtJ_T0093456.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112779249 112783261 + Amotl2 protein_coding processed_transcript MGP_NODShiLtJ_T0093457.1 MGP_NODShiLtJ_G0034989.1 mouse_genomes_project 9 112781650 112783247 + Amotl2 protein_coding retained_intron MGP_NODShiLtJ_T0093555.1 MGP_NODShiLtJ_G0035010.1 mouse_genomes_project 9 115271063 115297530 + MGP_NODShiLtJ_P0093555 Mrpl3 protein_coding protein_coding MGP_NODShiLtJ_T0093556.1 MGP_NODShiLtJ_G0035010.1 mouse_genomes_project 9 115271063 115294110 + MGP_NODShiLtJ_P0093556 Mrpl3 protein_coding protein_coding MGP_NODShiLtJ_T0093557.1 MGP_NODShiLtJ_G0035010.1 mouse_genomes_project 9 115271094 115279748 + MGP_NODShiLtJ_P0093557 Mrpl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093558.1 MGP_NODShiLtJ_G0035010.1 mouse_genomes_project 9 115271094 115273427 + MGP_NODShiLtJ_P0093558 Mrpl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093559.1 MGP_NODShiLtJ_G0035010.1 mouse_genomes_project 9 115271125 115295104 + MGP_NODShiLtJ_P0093559 Mrpl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093560.1 MGP_NODShiLtJ_G0035010.1 mouse_genomes_project 9 115288757 115291702 + Mrpl3 protein_coding retained_intron MGP_NODShiLtJ_T0092824.1 MGP_NODShiLtJ_G0034846.1 mouse_genomes_project 9 82778358 82869580 - MGP_NODShiLtJ_P0092824 Fam83b protein_coding protein_coding MGP_NODShiLtJ_T0092825.1 MGP_NODShiLtJ_G0034846.1 mouse_genomes_project 9 82779009 82846173 - MGP_NODShiLtJ_P0092825 Fam83b protein_coding protein_coding MGP_NODShiLtJ_T0091947.1 MGP_NODShiLtJ_G0034617.1 mouse_genomes_project 9 57887266 57950136 - MGP_NODShiLtJ_P0091947 Elmod1 protein_coding protein_coding MGP_NODShiLtJ_T0091948.1 MGP_NODShiLtJ_G0034617.1 mouse_genomes_project 9 57887266 57914459 - MGP_NODShiLtJ_P0091948 Elmod1 protein_coding protein_coding MGP_NODShiLtJ_T0010937.1 MGP_NODShiLtJ_G0009070.1 mouse_genomes_project 9 21322014 21322106 - Mir7082 miRNA miRNA MGP_NODShiLtJ_T0092756.1 MGP_NODShiLtJ_G0034826.1 mouse_genomes_project 9 79372608 79931888 - MGP_NODShiLtJ_P0092756 Unc13c protein_coding protein_coding MGP_NODShiLtJ_T0092757.1 MGP_NODShiLtJ_G0034826.1 mouse_genomes_project 9 79372612 79931893 - MGP_NODShiLtJ_P0092757 Unc13c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0092758.1 MGP_NODShiLtJ_G0034826.1 mouse_genomes_project 9 79374050 79898109 - MGP_NODShiLtJ_P0092758 Unc13c protein_coding protein_coding MGP_NODShiLtJ_T0094548.1 MGP_NODShiLtJ_G0035170.1 mouse_genomes_project 9 122258950 122357708 + MGP_NODShiLtJ_P0094548 Trank1 protein_coding protein_coding MGP_NODShiLtJ_T0094549.1 MGP_NODShiLtJ_G0035170.1 mouse_genomes_project 9 122259151 122317684 + Trank1 protein_coding processed_transcript MGP_NODShiLtJ_T0094550.1 MGP_NODShiLtJ_G0035170.1 mouse_genomes_project 9 122259307 122305221 + MGP_NODShiLtJ_P0094550 Trank1 protein_coding protein_coding MGP_NODShiLtJ_T0094551.1 MGP_NODShiLtJ_G0035170.1 mouse_genomes_project 9 122259440 122347440 + MGP_NODShiLtJ_P0094551 Trank1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0094552.1 MGP_NODShiLtJ_G0035170.1 mouse_genomes_project 9 122335701 122357708 + Trank1 protein_coding processed_transcript MGP_NODShiLtJ_T0094553.1 MGP_NODShiLtJ_G0035170.1 mouse_genomes_project 9 122335764 122351174 + Trank1 protein_coding processed_transcript MGP_NODShiLtJ_T0094554.1 MGP_NODShiLtJ_G0035170.1 mouse_genomes_project 9 122335769 122347280 + Trank1 protein_coding processed_transcript MGP_NODShiLtJ_T0094555.1 MGP_NODShiLtJ_G0035170.1 mouse_genomes_project 9 122348281 122352092 + Trank1 protein_coding retained_intron MGP_NODShiLtJ_T0101410.1 MGP_NODShiLtJ_G0035200.1 mouse_genomes_project 9 129540719 129688041 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101411.1 MGP_NODShiLtJ_G0035200.1 mouse_genomes_project 9 129586022 129688203 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101412.1 MGP_NODShiLtJ_G0035200.1 mouse_genomes_project 9 129631787 129688203 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101413.1 MGP_NODShiLtJ_G0035200.1 mouse_genomes_project 9 129686863 129718472 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0092627.1 MGP_NODShiLtJ_G0034805.1 mouse_genomes_project 9 77096624 77103956 - MGP_NODShiLtJ_P0092627 Polr2m protein_coding protein_coding MGP_NODShiLtJ_T0092632.1 MGP_NODShiLtJ_G0034805.1 mouse_genomes_project 9 77099633 77104070 - MGP_NODShiLtJ_P0092632 Polr2m protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0015944.1 MGP_NODShiLtJ_G0014052.1 mouse_genomes_project 9 77850328 77850707 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092313.1 MGP_NODShiLtJ_G0034722.1 mouse_genomes_project 9 67681619 67696163 + MGP_NODShiLtJ_P0092313 Cln6 protein_coding protein_coding MGP_NODShiLtJ_T0092314.1 MGP_NODShiLtJ_G0034722.1 mouse_genomes_project 9 67681626 67690175 + MGP_NODShiLtJ_P0092314 Cln6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092315.1 MGP_NODShiLtJ_G0034722.1 mouse_genomes_project 9 67690171 67694868 + MGP_NODShiLtJ_P0092315 Cln6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092316.1 MGP_NODShiLtJ_G0034722.1 mouse_genomes_project 9 67691189 67695319 + MGP_NODShiLtJ_P0092316 Cln6 protein_coding protein_coding MGP_NODShiLtJ_T0015947.1 MGP_NODShiLtJ_G0014055.1 mouse_genomes_project 9 78167326 78168295 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093712.1 MGP_NODShiLtJ_G0035036.1 mouse_genomes_project 9 116819910 116862099 - protein_coding processed_transcript MGP_NODShiLtJ_T0093714.1 MGP_NODShiLtJ_G0035036.1 mouse_genomes_project 9 116860795 116881570 - MGP_NODShiLtJ_P0093714 protein_coding protein_coding MGP_NODShiLtJ_T0091921.1 MGP_NODShiLtJ_G0034607.1 mouse_genomes_project 9 57293251 57311937 + MGP_NODShiLtJ_P0091921 Kdelc2 protein_coding protein_coding MGP_NODShiLtJ_T0100920.1 MGP_NODShiLtJ_G0039314.1 mouse_genomes_project 9 117561675 117561805 + Gm23595 snoRNA snoRNA MGP_NODShiLtJ_T0099594.1 MGP_NODShiLtJ_G0037988.1 mouse_genomes_project 9 39896565 39896764 - Gm24764 snRNA snRNA MGP_NODShiLtJ_T0005455.1 MGP_NODShiLtJ_G0004600.1 mouse_genomes_project 9 109013522 109019204 - 4930422M22Rik antisense antisense MGP_NODShiLtJ_T0015983.1 MGP_NODShiLtJ_G0014091.1 mouse_genomes_project 9 95456721 95457199 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091943.1 MGP_NODShiLtJ_G0034613.1 mouse_genomes_project 9 57622584 57645945 - MGP_NODShiLtJ_P0091943 Rab39 protein_coding protein_coding MGP_NODShiLtJ_T0005464.1 MGP_NODShiLtJ_G0004607.1 mouse_genomes_project 9 116554861 116556859 + 4930500F10Rik antisense antisense MGP_NODShiLtJ_T0092805.1 MGP_NODShiLtJ_G0034838.1 mouse_genomes_project 9 81578320 81645651 - MGP_NODShiLtJ_P0092805 Tmod3 protein_coding protein_coding MGP_NODShiLtJ_T0094260.1 MGP_NODShiLtJ_G0035118.1 mouse_genomes_project 9 119533379 119534534 + MGP_NODShiLtJ_P0094260 Ucn2 protein_coding protein_coding MGP_NODShiLtJ_T0091145.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30121956 31159453 - MGP_NODShiLtJ_P0091145 Ntm protein_coding protein_coding MGP_NODShiLtJ_T0091146.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30123193 30558653 - MGP_NODShiLtJ_P0091146 Ntm protein_coding protein_coding MGP_NODShiLtJ_T0091147.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30123412 30142311 - MGP_NODShiLtJ_P0091147 Ntm protein_coding protein_coding MGP_NODShiLtJ_T0091148.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30123674 30142311 - MGP_NODShiLtJ_P0091148 Ntm protein_coding protein_coding MGP_NODShiLtJ_T0091149.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30137149 30558185 - MGP_NODShiLtJ_P0091149 Ntm protein_coding protein_coding MGP_NODShiLtJ_T0091150.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30137275 30326505 - Ntm protein_coding processed_transcript MGP_NODShiLtJ_T0091151.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30137298 30243395 - Ntm protein_coding processed_transcript MGP_NODShiLtJ_T0091152.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30141289 31159454 - Ntm protein_coding retained_intron MGP_NODShiLtJ_T0091153.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30317304 31159454 - Ntm protein_coding retained_intron MGP_NODShiLtJ_T0091154.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 30558036 31159443 - Ntm protein_coding processed_transcript MGP_NODShiLtJ_T0091155.1 MGP_NODShiLtJ_G0034310.1 mouse_genomes_project 9 31138204 31159465 - Ntm protein_coding processed_transcript MGP_NODShiLtJ_T0091196.1 MGP_NODShiLtJ_G0034325.1 mouse_genomes_project 9 34074933 34171835 + Ets1 protein_coding retained_intron MGP_NODShiLtJ_T0091197.1 MGP_NODShiLtJ_G0034325.1 mouse_genomes_project 9 34074951 34090187 + Ets1 protein_coding retained_intron MGP_NODShiLtJ_T0091198.1 MGP_NODShiLtJ_G0034325.1 mouse_genomes_project 9 34135954 34197364 + MGP_NODShiLtJ_P0091198 Ets1 protein_coding protein_coding MGP_NODShiLtJ_T0091199.1 MGP_NODShiLtJ_G0034325.1 mouse_genomes_project 9 34136289 34200178 + MGP_NODShiLtJ_P0091199 Ets1 protein_coding protein_coding MGP_NODShiLtJ_T0091200.1 MGP_NODShiLtJ_G0034325.1 mouse_genomes_project 9 34136289 34196790 + MGP_NODShiLtJ_P0091200 Ets1 protein_coding protein_coding MGP_NODShiLtJ_T0092293.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67142071 67180882 + Anp32a protein_coding processed_transcript MGP_NODShiLtJ_T0092294.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67142107 67182020 + MGP_NODShiLtJ_P0092294 Anp32a protein_coding protein_coding MGP_NODShiLtJ_T0092295.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67142679 67177923 + MGP_NODShiLtJ_P0092295 Anp32a protein_coding protein_coding MGP_NODShiLtJ_T0092296.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67142852 67180853 + MGP_NODShiLtJ_P0092296 Anp32a protein_coding protein_coding MGP_NODShiLtJ_T0092297.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67143241 67176789 + MGP_NODShiLtJ_P0092297 Anp32a protein_coding protein_coding MGP_NODShiLtJ_T0092298.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67144840 67176802 + Anp32a protein_coding processed_transcript MGP_NODShiLtJ_T0092299.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67145571 67177920 + Anp32a protein_coding processed_transcript MGP_NODShiLtJ_T0092300.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67170189 67176882 + Anp32a protein_coding processed_transcript MGP_NODShiLtJ_T0092301.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67170195 67180488 + Anp32a protein_coding processed_transcript MGP_NODShiLtJ_T0092302.1 MGP_NODShiLtJ_G0034718.1 mouse_genomes_project 9 67176644 67180988 + Anp32a protein_coding retained_intron MGP_NODShiLtJ_T0091447.1 MGP_NODShiLtJ_G0034445.1 mouse_genomes_project 9 42453341 42454274 + MGP_NODShiLtJ_P0091447 Olfr967 protein_coding protein_coding MGP_NODShiLtJ_T0099592.1 MGP_NODShiLtJ_G0037986.1 mouse_genomes_project 9 33875825 33875932 - Gm22060 snRNA snRNA MGP_NODShiLtJ_T0094401.1 MGP_NODShiLtJ_G0035141.1 mouse_genomes_project 9 121158040 121177360 + MGP_NODShiLtJ_P0094401 Elp6 protein_coding protein_coding MGP_NODShiLtJ_T0094402.1 MGP_NODShiLtJ_G0035141.1 mouse_genomes_project 9 121158071 121178139 + MGP_NODShiLtJ_P0094402 Elp6 protein_coding protein_coding MGP_NODShiLtJ_T0094403.1 MGP_NODShiLtJ_G0035141.1 mouse_genomes_project 9 121158107 121175609 + MGP_NODShiLtJ_P0094403 Elp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094404.1 MGP_NODShiLtJ_G0035141.1 mouse_genomes_project 9 121158363 121168785 + MGP_NODShiLtJ_P0094404 Elp6 protein_coding protein_coding MGP_NODShiLtJ_T0094405.1 MGP_NODShiLtJ_G0035141.1 mouse_genomes_project 9 121162029 121167005 + Elp6 protein_coding retained_intron MGP_NODShiLtJ_T0092687.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78186911 78232036 - MGP_NODShiLtJ_P0092687 Tex9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092688.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78195897 78232036 - MGP_NODShiLtJ_P0092688 Tex9 protein_coding protein_coding MGP_NODShiLtJ_T0092689.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78197666 78212372 - Tex9 protein_coding retained_intron MGP_NODShiLtJ_T0092690.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78198397 78232292 - MGP_NODShiLtJ_P0092690 Tex9 protein_coding protein_coding MGP_NODShiLtJ_T0092691.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78198425 78232287 - MGP_NODShiLtJ_P0092691 Tex9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092692.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78198501 78232181 - MGP_NODShiLtJ_P0092692 Tex9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092693.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78198523 78232077 - MGP_NODShiLtJ_P0092693 Tex9 protein_coding protein_coding MGP_NODShiLtJ_T0092694.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78199248 78232041 - Tex9 protein_coding retained_intron MGP_NODShiLtJ_T0092695.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78199267 78217305 - Tex9 protein_coding processed_transcript MGP_NODShiLtJ_T0092696.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78199297 78227089 - MGP_NODShiLtJ_P0092696 Tex9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092697.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78214740 78215606 - Tex9 protein_coding retained_intron MGP_NODShiLtJ_T0092698.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78214840 78225848 - MGP_NODShiLtJ_P0092698 Tex9 protein_coding protein_coding MGP_NODShiLtJ_T0092699.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78214841 78232019 - MGP_NODShiLtJ_P0092699 Tex9 protein_coding protein_coding MGP_NODShiLtJ_T0092700.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78217241 78232169 - Tex9 protein_coding retained_intron MGP_NODShiLtJ_T0092701.1 MGP_NODShiLtJ_G0034812.1 mouse_genomes_project 9 78217420 78232015 - Tex9 protein_coding retained_intron MGP_NODShiLtJ_T0091946.1 MGP_NODShiLtJ_G0034616.1 mouse_genomes_project 9 57858742 57859222 + MGP_NODShiLtJ_P0091946 Gm16380 protein_coding protein_coding MGP_NODShiLtJ_T0005430.1 MGP_NODShiLtJ_G0004585.1 mouse_genomes_project 9 90892857 90920139 + Gm2087 antisense antisense MGP_NODShiLtJ_T0098114.1 MGP_NODShiLtJ_G0036526.1 mouse_genomes_project 9 112158426 112158544 + n-R5s88 rRNA rRNA MGP_NODShiLtJ_T0090843.1 MGP_NODShiLtJ_G0034176.1 mouse_genomes_project 9 17837818 17846922 + MGP_NODShiLtJ_P0090843 Ubtfl1 protein_coding protein_coding MGP_NODShiLtJ_T0090844.1 MGP_NODShiLtJ_G0034176.1 mouse_genomes_project 9 17837820 17845930 + MGP_NODShiLtJ_P0090844 Ubtfl1 protein_coding protein_coding MGP_NODShiLtJ_T0090845.1 MGP_NODShiLtJ_G0034176.1 mouse_genomes_project 9 17844023 17845672 + MGP_NODShiLtJ_P0090845 Ubtfl1 protein_coding protein_coding MGP_NODShiLtJ_T0098462.1 MGP_NODShiLtJ_G0036862.1 mouse_genomes_project 9 29257256 29258614 + Gm15606 sense_intronic sense_intronic MGP_NODShiLtJ_T0098463.1 MGP_NODShiLtJ_G0036862.1 mouse_genomes_project 9 29257309 29258891 + Gm15606 sense_intronic sense_intronic MGP_NODShiLtJ_T0091053.1 MGP_NODShiLtJ_G0034274.1 mouse_genomes_project 9 22439118 22454809 - MGP_NODShiLtJ_P0091053 Zfp653 protein_coding protein_coding MGP_NODShiLtJ_T0091054.1 MGP_NODShiLtJ_G0034274.1 mouse_genomes_project 9 22439118 22454809 - MGP_NODShiLtJ_P0091054 Zfp653 protein_coding protein_coding MGP_NODShiLtJ_T0016016.1 MGP_NODShiLtJ_G0014124.1 mouse_genomes_project 9 106414118 106415022 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094628.1 MGP_NODShiLtJ_G0035193.1 mouse_genomes_project 9 126196250 126254599 - MGP_NODShiLtJ_P0094628 Cmtm8 protein_coding protein_coding MGP_NODShiLtJ_T0090645.1 MGP_NODShiLtJ_G0034108.1 mouse_genomes_project 9 399248 931337 + MGP_NODShiLtJ_P0090645 Gucy1a2 protein_coding protein_coding MGP_NODShiLtJ_T0092861.1 MGP_NODShiLtJ_G0034854.1 mouse_genomes_project 9 84664976 84693141 - MGP_NODShiLtJ_P0092861 Fbxo9 protein_coding protein_coding MGP_NODShiLtJ_T0092862.1 MGP_NODShiLtJ_G0034854.1 mouse_genomes_project 9 84664979 84693550 - MGP_NODShiLtJ_P0092862 Fbxo9 protein_coding protein_coding MGP_NODShiLtJ_T0092863.1 MGP_NODShiLtJ_G0034854.1 mouse_genomes_project 9 84665318 84668371 - Fbxo9 protein_coding retained_intron MGP_NODShiLtJ_T0092864.1 MGP_NODShiLtJ_G0034854.1 mouse_genomes_project 9 84669337 84671326 - Fbxo9 protein_coding retained_intron MGP_NODShiLtJ_T0092865.1 MGP_NODShiLtJ_G0034854.1 mouse_genomes_project 9 84679179 84693089 - MGP_NODShiLtJ_P0092865 Fbxo9 protein_coding protein_coding MGP_NODShiLtJ_T0092866.1 MGP_NODShiLtJ_G0034854.1 mouse_genomes_project 9 84684267 84693072 - MGP_NODShiLtJ_P0092866 Fbxo9 protein_coding protein_coding MGP_NODShiLtJ_T0091105.1 MGP_NODShiLtJ_G0034297.1 mouse_genomes_project 9 26295094 26417940 + MGP_NODShiLtJ_P0091105 Eepd1 protein_coding protein_coding MGP_NODShiLtJ_T0091106.1 MGP_NODShiLtJ_G0034297.1 mouse_genomes_project 9 26296412 26300862 + Eepd1 protein_coding processed_transcript MGP_NODShiLtJ_T0091903.1 MGP_NODShiLtJ_G0034599.1 mouse_genomes_project 9 55373366 55384364 + MGP_NODShiLtJ_P0091903 Gm7293 protein_coding protein_coding MGP_NODShiLtJ_T0100912.1 MGP_NODShiLtJ_G0039306.1 mouse_genomes_project 9 104980784 104980894 + Gm25582 snoRNA snoRNA MGP_NODShiLtJ_T0005444.1 MGP_NODShiLtJ_G0004592.1 mouse_genomes_project 9 105433586 105435058 - C78334 antisense antisense MGP_NODShiLtJ_T0005445.1 MGP_NODShiLtJ_G0004592.1 mouse_genomes_project 9 105433594 105440346 - C78334 antisense antisense MGP_NODShiLtJ_T0090779.1 MGP_NODShiLtJ_G0034156.1 mouse_genomes_project 9 13703961 13710058 - MGP_NODShiLtJ_P0090779 1700012B09Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090780.1 MGP_NODShiLtJ_G0034156.1 mouse_genomes_project 9 13703967 13719441 - MGP_NODShiLtJ_P0090780 1700012B09Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090781.1 MGP_NODShiLtJ_G0034156.1 mouse_genomes_project 9 13703969 13710014 - MGP_NODShiLtJ_P0090781 1700012B09Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090782.1 MGP_NODShiLtJ_G0034156.1 mouse_genomes_project 9 13705560 13719458 - MGP_NODShiLtJ_P0090782 1700012B09Rik protein_coding protein_coding MGP_NODShiLtJ_T0090783.1 MGP_NODShiLtJ_G0034156.1 mouse_genomes_project 9 13705560 13719441 - MGP_NODShiLtJ_P0090783 1700012B09Rik protein_coding protein_coding MGP_NODShiLtJ_T0093873.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118106759 118116643 - MGP_NODShiLtJ_P0093873 Slc38a3 protein_coding protein_coding MGP_NODShiLtJ_T0093874.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118107290 118125953 - MGP_NODShiLtJ_P0093874 Slc38a3 protein_coding protein_coding MGP_NODShiLtJ_T0093875.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118107292 118127579 - Slc38a3 protein_coding retained_intron MGP_NODShiLtJ_T0093876.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118107296 118126005 - MGP_NODShiLtJ_P0093876 Slc38a3 protein_coding protein_coding MGP_NODShiLtJ_T0093877.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118107296 118127544 - MGP_NODShiLtJ_P0093877 Slc38a3 protein_coding protein_coding MGP_NODShiLtJ_T0093878.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118112141 118113756 - MGP_NODShiLtJ_P0093878 Slc38a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093879.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118112171 118113343 - MGP_NODShiLtJ_P0093879 Slc38a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093880.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118112191 118113134 - Slc38a3 protein_coding retained_intron MGP_NODShiLtJ_T0093881.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118113515 118114375 - Slc38a3 protein_coding retained_intron MGP_NODShiLtJ_T0093882.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118114010 118116333 - Slc38a3 protein_coding processed_transcript MGP_NODShiLtJ_T0093883.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118114743 118128097 - MGP_NODShiLtJ_P0093883 Slc38a3 protein_coding protein_coding MGP_NODShiLtJ_T0093884.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118114924 118127576 - MGP_NODShiLtJ_P0093884 Slc38a3 protein_coding protein_coding MGP_NODShiLtJ_T0093885.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118115749 118123999 - MGP_NODShiLtJ_P0093885 Slc38a3 protein_coding protein_coding MGP_NODShiLtJ_T0093886.1 MGP_NODShiLtJ_G0035065.1 mouse_genomes_project 9 118116332 118127589 - Slc38a3 protein_coding processed_transcript MGP_NODShiLtJ_T0090801.1 MGP_NODShiLtJ_G0034162.1 mouse_genomes_project 9 14017338 14081184 - MGP_NODShiLtJ_P0090801 Hephl1 protein_coding protein_coding MGP_NODShiLtJ_T0091446.1 MGP_NODShiLtJ_G0034444.1 mouse_genomes_project 9 42435323 42437278 + MGP_NODShiLtJ_P0091446 Olfr150 protein_coding protein_coding MGP_NODShiLtJ_T0094707.1 MGP_NODShiLtJ_G0035213.1 mouse_genomes_project 9 130985919 130990434 - MGP_NODShiLtJ_P0094707 Slc22a13 protein_coding protein_coding MGP_NODShiLtJ_T0015995.1 MGP_NODShiLtJ_G0014103.1 mouse_genomes_project 9 98572777 98573101 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094864.1 MGP_NODShiLtJ_G0035268.1 mouse_genomes_project 9 135087743 135091313 + MGP_NODShiLtJ_P0094864 Tmem42 protein_coding protein_coding MGP_NODShiLtJ_T0005450.1 MGP_NODShiLtJ_G0004596.1 mouse_genomes_project 9 106624038 106628199 + Gm16185 antisense antisense MGP_NODShiLtJ_T0093653.1 MGP_NODShiLtJ_G0035027.1 mouse_genomes_project 9 116682768 116692261 + MGP_NODShiLtJ_P0093653 Dusp7 protein_coding protein_coding MGP_NODShiLtJ_T0093654.1 MGP_NODShiLtJ_G0035027.1 mouse_genomes_project 9 116683745 116685002 + Dusp7 protein_coding processed_transcript MGP_NODShiLtJ_T0093655.1 MGP_NODShiLtJ_G0035027.1 mouse_genomes_project 9 116684870 116688150 + MGP_NODShiLtJ_P0093655 Dusp7 protein_coding protein_coding MGP_NODShiLtJ_T0093656.1 MGP_NODShiLtJ_G0035027.1 mouse_genomes_project 9 116688924 116692258 + Dusp7 protein_coding processed_transcript MGP_NODShiLtJ_T0090944.1 MGP_NODShiLtJ_G0034229.1 mouse_genomes_project 9 21118903 21122706 + MGP_NODShiLtJ_P0090944 Ppan protein_coding protein_coding MGP_NODShiLtJ_T0090945.1 MGP_NODShiLtJ_G0034229.1 mouse_genomes_project 9 21118978 21120864 + Ppan protein_coding retained_intron MGP_NODShiLtJ_T0090946.1 MGP_NODShiLtJ_G0034229.1 mouse_genomes_project 9 21118995 21120205 + Ppan protein_coding retained_intron MGP_NODShiLtJ_T0090947.1 MGP_NODShiLtJ_G0034229.1 mouse_genomes_project 9 21119013 21122706 + Ppan protein_coding retained_intron MGP_NODShiLtJ_T0090948.1 MGP_NODShiLtJ_G0034229.1 mouse_genomes_project 9 21121167 21121884 + Ppan protein_coding retained_intron MGP_NODShiLtJ_T0090949.1 MGP_NODShiLtJ_G0034229.1 mouse_genomes_project 9 21121736 21122212 + Ppan protein_coding retained_intron MGP_NODShiLtJ_T0016021.1 MGP_NODShiLtJ_G0014129.1 mouse_genomes_project 9 108603540 108603975 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0015962.1 MGP_NODShiLtJ_G0014070.1 mouse_genomes_project 9 83137289 83138187 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091793.1 MGP_NODShiLtJ_G0034567.1 mouse_genomes_project 9 52658591 52682826 + MGP_NODShiLtJ_P0091793 Zw10 protein_coding protein_coding MGP_NODShiLtJ_T0092155.1 MGP_NODShiLtJ_G0034683.1 mouse_genomes_project 9 62552260 62555225 - MGP_NODShiLtJ_P0092155 Islr protein_coding protein_coding MGP_NODShiLtJ_T0092156.1 MGP_NODShiLtJ_G0034683.1 mouse_genomes_project 9 62552260 62554558 - MGP_NODShiLtJ_P0092156 Islr protein_coding protein_coding MGP_NODShiLtJ_T0092876.1 MGP_NODShiLtJ_G0034857.1 mouse_genomes_project 9 84813818 84837355 + MGP_NODShiLtJ_P0092876 protein_coding protein_coding MGP_NODShiLtJ_T0092426.1 MGP_NODShiLtJ_G0034759.1 mouse_genomes_project 9 70644952 70672453 - MGP_NODShiLtJ_P0092426 Plekho2 protein_coding protein_coding MGP_NODShiLtJ_T0092387.1 MGP_NODShiLtJ_G0034740.1 mouse_genomes_project 9 69714630 69741959 - MGP_NODShiLtJ_P0092387 Rab11a protein_coding protein_coding MGP_NODShiLtJ_T0092388.1 MGP_NODShiLtJ_G0034740.1 mouse_genomes_project 9 69719753 69742078 - MGP_NODShiLtJ_P0092388 Rab11a protein_coding protein_coding MGP_NODShiLtJ_T0092389.1 MGP_NODShiLtJ_G0034740.1 mouse_genomes_project 9 69719855 69728968 - Rab11a protein_coding retained_intron MGP_NODShiLtJ_T0092390.1 MGP_NODShiLtJ_G0034740.1 mouse_genomes_project 9 69719956 69729958 - MGP_NODShiLtJ_P0092390 Rab11a protein_coding protein_coding MGP_NODShiLtJ_T0092391.1 MGP_NODShiLtJ_G0034740.1 mouse_genomes_project 9 69720020 69729701 - Rab11a protein_coding processed_transcript MGP_NODShiLtJ_T0092392.1 MGP_NODShiLtJ_G0034740.1 mouse_genomes_project 9 69720193 69741959 - MGP_NODShiLtJ_P0092392 Rab11a protein_coding protein_coding MGP_NODShiLtJ_T0092393.1 MGP_NODShiLtJ_G0034740.1 mouse_genomes_project 9 69720203 69742088 - MGP_NODShiLtJ_P0092393 Rab11a protein_coding protein_coding MGP_NODShiLtJ_T0092394.1 MGP_NODShiLtJ_G0034740.1 mouse_genomes_project 9 69729938 69740852 - Rab11a protein_coding processed_transcript MGP_NODShiLtJ_T0016044.1 MGP_NODShiLtJ_G0014152.1 mouse_genomes_project 9 120725406 120725806 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0092955.1 MGP_NODShiLtJ_G0034879.1 mouse_genomes_project 9 89069087 89491386 + MGP_NODShiLtJ_P0092955 Mei4 protein_coding protein_coding MGP_NODShiLtJ_T0092956.1 MGP_NODShiLtJ_G0034879.1 mouse_genomes_project 9 89119665 89264077 + MGP_NODShiLtJ_P0092956 Mei4 protein_coding protein_coding MGP_NODShiLtJ_T0002382.1 MGP_NODShiLtJ_G0002291.1 mouse_genomes_project 9 111053648 111055242 + TEC TEC MGP_NODShiLtJ_T0009191.1 MGP_NODShiLtJ_G0007379.1 mouse_genomes_project 9 80874650 80918994 + Gm20649 lincRNA lincRNA MGP_NODShiLtJ_T0090866.1 MGP_NODShiLtJ_G0034194.1 mouse_genomes_project 9 19079024 19082815 - MGP_NODShiLtJ_P0090866 Olfr846 protein_coding protein_coding MGP_NODShiLtJ_T0094632.1 MGP_NODShiLtJ_G0035195.1 mouse_genomes_project 9 126397070 126675599 + MGP_NODShiLtJ_P0094632 Osbpl10 protein_coding protein_coding MGP_NODShiLtJ_T0094633.1 MGP_NODShiLtJ_G0035195.1 mouse_genomes_project 9 126408812 126675601 + MGP_NODShiLtJ_P0094633 Osbpl10 protein_coding protein_coding MGP_NODShiLtJ_T0094634.1 MGP_NODShiLtJ_G0035195.1 mouse_genomes_project 9 126418023 126606600 + MGP_NODShiLtJ_P0094634 Osbpl10 protein_coding protein_coding MGP_NODShiLtJ_T0094635.1 MGP_NODShiLtJ_G0035195.1 mouse_genomes_project 9 126436122 126675595 + MGP_NODShiLtJ_P0094635 Osbpl10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094636.1 MGP_NODShiLtJ_G0035195.1 mouse_genomes_project 9 126477655 126495875 + MGP_NODShiLtJ_P0094636 Osbpl10 protein_coding protein_coding MGP_NODShiLtJ_T0094637.1 MGP_NODShiLtJ_G0035195.1 mouse_genomes_project 9 126495841 126675599 + MGP_NODShiLtJ_P0094637 Osbpl10 protein_coding protein_coding MGP_NODShiLtJ_T0094638.1 MGP_NODShiLtJ_G0035195.1 mouse_genomes_project 9 126514748 126661799 + Osbpl10 protein_coding processed_transcript MGP_NODShiLtJ_T0094639.1 MGP_NODShiLtJ_G0035195.1 mouse_genomes_project 9 126548080 126660193 + Osbpl10 protein_coding processed_transcript MGP_NODShiLtJ_T0091070.1 MGP_NODShiLtJ_G0034282.1 mouse_genomes_project 9 22684304 22697910 - MGP_NODShiLtJ_P0091070 Zfp599 protein_coding protein_coding MGP_NODShiLtJ_T0002312.1 MGP_NODShiLtJ_G0002222.1 mouse_genomes_project 9 60609033 60611067 - TEC TEC MGP_NODShiLtJ_T0091192.1 MGP_NODShiLtJ_G0034323.1 mouse_genomes_project 9 33798931 33826460 + MGP_NODShiLtJ_P0091192 Kcnj1 protein_coding protein_coding MGP_NODShiLtJ_T0091193.1 MGP_NODShiLtJ_G0034323.1 mouse_genomes_project 9 33821252 33826460 + MGP_NODShiLtJ_P0091193 Kcnj1 protein_coding protein_coding MGP_NODShiLtJ_T0015916.1 MGP_NODShiLtJ_G0014024.1 mouse_genomes_project 9 35504832 35505064 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091420.1 MGP_NODShiLtJ_G0034424.1 mouse_genomes_project 9 41469395 41470331 - MGP_NODShiLtJ_P0091420 Olfr936 protein_coding protein_coding MGP_NODShiLtJ_T0094420.1 MGP_NODShiLtJ_G0035144.1 mouse_genomes_project 9 121285222 121288468 + MGP_NODShiLtJ_P0094420 Ngp protein_coding protein_coding MGP_NODShiLtJ_T0091669.1 MGP_NODShiLtJ_G0034527.1 mouse_genomes_project 9 48346938 48369172 + MGP_NODShiLtJ_P0091669 Mpzl3 protein_coding protein_coding MGP_NODShiLtJ_T0091670.1 MGP_NODShiLtJ_G0034527.1 mouse_genomes_project 9 48346940 48356919 + Mpzl3 protein_coding retained_intron MGP_NODShiLtJ_T0091671.1 MGP_NODShiLtJ_G0034527.1 mouse_genomes_project 9 48346961 48358212 + MGP_NODShiLtJ_P0091671 Mpzl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091672.1 MGP_NODShiLtJ_G0034527.1 mouse_genomes_project 9 48350998 48357403 + Mpzl3 protein_coding retained_intron MGP_NODShiLtJ_T0091673.1 MGP_NODShiLtJ_G0034527.1 mouse_genomes_project 9 48362352 48366896 + Mpzl3 protein_coding retained_intron MGP_NODShiLtJ_T0005371.1 MGP_NODShiLtJ_G0004547.1 mouse_genomes_project 9 43624527 43626628 - antisense antisense MGP_NODShiLtJ_T0094823.1 MGP_NODShiLtJ_G0035250.1 mouse_genomes_project 9 133803549 133847587 - MGP_NODShiLtJ_P0094823 Ccdc13 protein_coding protein_coding MGP_NODShiLtJ_T0094824.1 MGP_NODShiLtJ_G0035250.1 mouse_genomes_project 9 133803555 133817560 - MGP_NODShiLtJ_P0094824 Ccdc13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094825.1 MGP_NODShiLtJ_G0035250.1 mouse_genomes_project 9 133804090 133817706 - Ccdc13 protein_coding retained_intron MGP_NODShiLtJ_T0094826.1 MGP_NODShiLtJ_G0035250.1 mouse_genomes_project 9 133805942 133817542 - MGP_NODShiLtJ_P0094826 Ccdc13 protein_coding protein_coding MGP_NODShiLtJ_T0094827.1 MGP_NODShiLtJ_G0035250.1 mouse_genomes_project 9 133806453 133817645 - Ccdc13 protein_coding retained_intron MGP_NODShiLtJ_T0094828.1 MGP_NODShiLtJ_G0035250.1 mouse_genomes_project 9 133824757 133838475 - Ccdc13 protein_coding retained_intron MGP_NODShiLtJ_T0015989.1 MGP_NODShiLtJ_G0014097.1 mouse_genomes_project 9 96764701 96765032 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0016054.1 MGP_NODShiLtJ_G0014162.1 mouse_genomes_project 9 135894169 135894443 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094745.1 MGP_NODShiLtJ_G0035230.1 mouse_genomes_project 9 131955031 131971877 + MGP_NODShiLtJ_P0094745 Slc25a38 protein_coding protein_coding MGP_NODShiLtJ_T0094746.1 MGP_NODShiLtJ_G0035230.1 mouse_genomes_project 9 131955062 131967507 + MGP_NODShiLtJ_P0094746 Slc25a38 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094747.1 MGP_NODShiLtJ_G0035230.1 mouse_genomes_project 9 131955065 131967136 + Slc25a38 protein_coding processed_transcript MGP_NODShiLtJ_T0094748.1 MGP_NODShiLtJ_G0035230.1 mouse_genomes_project 9 131955065 131956255 + Slc25a38 protein_coding processed_transcript MGP_NODShiLtJ_T0094749.1 MGP_NODShiLtJ_G0035230.1 mouse_genomes_project 9 131955081 131971024 + MGP_NODShiLtJ_P0094749 Slc25a38 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094750.1 MGP_NODShiLtJ_G0035230.1 mouse_genomes_project 9 131961686 131969026 + MGP_NODShiLtJ_P0094750 Slc25a38 protein_coding protein_coding MGP_NODShiLtJ_T0094751.1 MGP_NODShiLtJ_G0035230.1 mouse_genomes_project 9 131961825 131967111 + Slc25a38 protein_coding processed_transcript MGP_NODShiLtJ_T0092028.1 MGP_NODShiLtJ_G0034643.1 mouse_genomes_project 9 60108671 60120575 - MGP_NODShiLtJ_P0092028 4930563M21Rik protein_coding protein_coding MGP_NODShiLtJ_T0092768.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080190 81104483 + MGP_NODShiLtJ_P0092768 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0092769.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080190 81104464 + MGP_NODShiLtJ_P0092769 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0092770.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080253 81081059 + Arpp19 protein_coding retained_intron MGP_NODShiLtJ_T0092771.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080253 81101007 + MGP_NODShiLtJ_P0092771 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0092772.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080255 81101880 + MGP_NODShiLtJ_P0092772 Arpp19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092773.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080294 81104483 + MGP_NODShiLtJ_P0092773 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0092774.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080325 81101062 + MGP_NODShiLtJ_P0092774 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0092775.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080395 81100991 + MGP_NODShiLtJ_P0092775 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0092776.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81080493 81100974 + MGP_NODShiLtJ_P0092776 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0092777.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81095662 81101553 + MGP_NODShiLtJ_P0092777 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0092778.1 MGP_NODShiLtJ_G0034830.1 mouse_genomes_project 9 81095736 81102246 + MGP_NODShiLtJ_P0092778 Arpp19 protein_coding protein_coding MGP_NODShiLtJ_T0094830.1 MGP_NODShiLtJ_G0035252.1 mouse_genomes_project 9 133902094 133914781 + MGP_NODShiLtJ_P0094830 Ackr2 protein_coding protein_coding MGP_NODShiLtJ_T0094667.1 MGP_NODShiLtJ_G0035202.1 mouse_genomes_project 9 129747107 129835539 - MGP_NODShiLtJ_P0094667 Cmc1 protein_coding protein_coding MGP_NODShiLtJ_T0009188.1 MGP_NODShiLtJ_G0007376.1 mouse_genomes_project 9 78582282 78588263 - lincRNA lincRNA MGP_NODShiLtJ_T0092283.1 MGP_NODShiLtJ_G0034714.1 mouse_genomes_project 9 66685484 66717582 - MGP_NODShiLtJ_P0092283 Kif23 protein_coding protein_coding MGP_NODShiLtJ_T0092796.1 MGP_NODShiLtJ_G0034835.1 mouse_genomes_project 9 81434189 81456670 - Mapk6 protein_coding processed_transcript MGP_NODShiLtJ_T0092797.1 MGP_NODShiLtJ_G0034835.1 mouse_genomes_project 9 81452113 81478501 - MGP_NODShiLtJ_P0092797 Mapk6 protein_coding protein_coding MGP_NODShiLtJ_T0092798.1 MGP_NODShiLtJ_G0034835.1 mouse_genomes_project 9 81452115 81479147 - MGP_NODShiLtJ_P0092798 Mapk6 protein_coding protein_coding MGP_NODShiLtJ_T0092799.1 MGP_NODShiLtJ_G0034835.1 mouse_genomes_project 9 81460724 81465243 - Mapk6 protein_coding retained_intron MGP_NODShiLtJ_T0092800.1 MGP_NODShiLtJ_G0034835.1 mouse_genomes_project 9 81461369 81479138 - Mapk6 protein_coding retained_intron MGP_NODShiLtJ_T0092801.1 MGP_NODShiLtJ_G0034835.1 mouse_genomes_project 9 81467247 81478725 - Mapk6 protein_coding processed_transcript MGP_NODShiLtJ_T0092802.1 MGP_NODShiLtJ_G0034835.1 mouse_genomes_project 9 81467400 81479127 - Mapk6 protein_coding processed_transcript MGP_NODShiLtJ_T0092893.1 MGP_NODShiLtJ_G0034864.1 mouse_genomes_project 9 85042487 85045111 - MGP_NODShiLtJ_P0092893 Ooep protein_coding protein_coding MGP_NODShiLtJ_T0091519.1 MGP_NODShiLtJ_G0034478.1 mouse_genomes_project 9 46059520 46207479 - MGP_NODShiLtJ_P0091519 Arhgef12 protein_coding protein_coding MGP_NODShiLtJ_T0091520.1 MGP_NODShiLtJ_G0034478.1 mouse_genomes_project 9 46059521 46207247 - MGP_NODShiLtJ_P0091520 Arhgef12 protein_coding protein_coding MGP_NODShiLtJ_T0094592.1 MGP_NODShiLtJ_G0035174.1 mouse_genomes_project 9 124639032 124649257 - MGP_NODShiLtJ_P0094592 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0009197.1 MGP_NODShiLtJ_G0007384.1 mouse_genomes_project 9 84760081 84763044 + C920006O11Rik lincRNA lincRNA MGP_NODShiLtJ_T0090735.1 MGP_NODShiLtJ_G0034143.1 mouse_genomes_project 9 12179062 12224118 + MGP_NODShiLtJ_P0090735 Ccdc82 protein_coding protein_coding MGP_NODShiLtJ_T0090736.1 MGP_NODShiLtJ_G0034143.1 mouse_genomes_project 9 12179075 12184453 + MGP_NODShiLtJ_P0090736 Ccdc82 protein_coding protein_coding MGP_NODShiLtJ_T0100859.1 MGP_NODShiLtJ_G0039253.1 mouse_genomes_project 9 14297585 14297716 + Gm24455 snoRNA snoRNA MGP_NODShiLtJ_T0011634.1 MGP_NODShiLtJ_G0009767.1 mouse_genomes_project 9 108335845 108335952 - Gm27919 misc_RNA misc_RNA MGP_NODShiLtJ_T0091558.1 MGP_NODShiLtJ_G0034492.1 mouse_genomes_project 9 47327731 47332195 + MGP_NODShiLtJ_P0091558 Mcam protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091559.1 MGP_NODShiLtJ_G0034492.1 mouse_genomes_project 9 47327915 47335074 + MGP_NODShiLtJ_P0091559 Mcam protein_coding protein_coding MGP_NODShiLtJ_T0091560.1 MGP_NODShiLtJ_G0034492.1 mouse_genomes_project 9 47329806 47330535 + MGP_NODShiLtJ_P0091560 Mcam protein_coding protein_coding MGP_NODShiLtJ_T0091561.1 MGP_NODShiLtJ_G0034492.1 mouse_genomes_project 9 47330123 47332943 + Mcam protein_coding retained_intron MGP_NODShiLtJ_T0091522.1 MGP_NODShiLtJ_G0034480.1 mouse_genomes_project 9 46228820 46320120 - MGP_NODShiLtJ_P0091522 Pou2f3 protein_coding protein_coding MGP_NODShiLtJ_T0091523.1 MGP_NODShiLtJ_G0034480.1 mouse_genomes_project 9 46229420 46315622 - MGP_NODShiLtJ_P0091523 Pou2f3 protein_coding protein_coding MGP_NODShiLtJ_T0091069.1 MGP_NODShiLtJ_G0034281.1 mouse_genomes_project 9 22659379 22679072 + MGP_NODShiLtJ_P0091069 Zfp809 protein_coding protein_coding MGP_NODShiLtJ_T0091387.1 MGP_NODShiLtJ_G0034397.1 mouse_genomes_project 9 40581180 40584344 + MGP_NODShiLtJ_P0091387 Olfr251 protein_coding protein_coding MGP_NODShiLtJ_T0091457.1 MGP_NODShiLtJ_G0034455.1 mouse_genomes_project 9 42768892 42769937 - MGP_NODShiLtJ_P0091457 Olfr979 protein_coding protein_coding MGP_NODShiLtJ_T0099621.1 MGP_NODShiLtJ_G0038015.1 mouse_genomes_project 9 78422147 78422254 + Gm23057 snRNA snRNA MGP_NODShiLtJ_T0015987.1 MGP_NODShiLtJ_G0014095.1 mouse_genomes_project 9 96259086 96259672 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010960.1 MGP_NODShiLtJ_G0009093.1 mouse_genomes_project 9 57310875 57310957 - Mir130c miRNA miRNA MGP_NODShiLtJ_T0002373.1 MGP_NODShiLtJ_G0002282.1 mouse_genomes_project 9 108122154 108123334 + TEC TEC MGP_NODShiLtJ_T0002323.1 MGP_NODShiLtJ_G0002233.1 mouse_genomes_project 9 78081912 78083471 + TEC TEC MGP_NODShiLtJ_T0101206.1 MGP_NODShiLtJ_G0039511.1 mouse_genomes_project 9 85108791 85110619 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101207.1 MGP_NODShiLtJ_G0039511.1 mouse_genomes_project 9 85109114 85111193 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101208.1 MGP_NODShiLtJ_G0039511.1 mouse_genomes_project 9 85109665 85112872 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0094753.1 MGP_NODShiLtJ_G0035232.1 mouse_genomes_project 9 132001365 132020843 + MGP_NODShiLtJ_P0094753 Mobp protein_coding protein_coding MGP_NODShiLtJ_T0094754.1 MGP_NODShiLtJ_G0035232.1 mouse_genomes_project 9 132001365 132027540 + MGP_NODShiLtJ_P0094754 Mobp protein_coding protein_coding MGP_NODShiLtJ_T0094755.1 MGP_NODShiLtJ_G0035232.1 mouse_genomes_project 9 132001365 132032933 + MGP_NODShiLtJ_P0094755 Mobp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0094756.1 MGP_NODShiLtJ_G0035232.1 mouse_genomes_project 9 132001365 132027540 + MGP_NODShiLtJ_P0094756 Mobp protein_coding protein_coding MGP_NODShiLtJ_T0091429.1 MGP_NODShiLtJ_G0034433.1 mouse_genomes_project 9 42109802 42125640 - MGP_NODShiLtJ_P0091429 Olfr44 protein_coding protein_coding MGP_NODShiLtJ_T0010984.1 MGP_NODShiLtJ_G0009117.1 mouse_genomes_project 9 117645981 117646069 - Gm22238 miRNA miRNA MGP_NODShiLtJ_T0090952.1 MGP_NODShiLtJ_G0034232.1 mouse_genomes_project 9 21201208 21212066 - MGP_NODShiLtJ_P0090952 S1pr2 protein_coding protein_coding MGP_NODShiLtJ_T0092021.1 MGP_NODShiLtJ_G0034641.1 mouse_genomes_project 9 59619401 59623300 + MGP_NODShiLtJ_P0092021 Isl2 protein_coding protein_coding MGP_NODShiLtJ_T0092022.1 MGP_NODShiLtJ_G0034641.1 mouse_genomes_project 9 59621877 59626913 + MGP_NODShiLtJ_P0092022 Isl2 protein_coding protein_coding MGP_NODShiLtJ_T0092023.1 MGP_NODShiLtJ_G0034641.1 mouse_genomes_project 9 59621936 59626913 + MGP_NODShiLtJ_P0092023 Isl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092024.1 MGP_NODShiLtJ_G0034641.1 mouse_genomes_project 9 59621936 59626911 + MGP_NODShiLtJ_P0092024 Isl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092025.1 MGP_NODShiLtJ_G0034641.1 mouse_genomes_project 9 59623065 59625010 + Isl2 protein_coding retained_intron MGP_NODShiLtJ_T0015972.1 MGP_NODShiLtJ_G0014080.1 mouse_genomes_project 9 87903435 87904896 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100861.1 MGP_NODShiLtJ_G0039255.1 mouse_genomes_project 9 14298628 14298765 + Gm25791 snoRNA snoRNA MGP_NODShiLtJ_T0009271.1 MGP_NODShiLtJ_G0007440.1 mouse_genomes_project 9 131227388 131231941 - 4930516B21Rik lincRNA lincRNA MGP_NODShiLtJ_T0016030.1 MGP_NODShiLtJ_G0014138.1 mouse_genomes_project 9 111417890 111418745 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009150.1 MGP_NODShiLtJ_G0007346.1 mouse_genomes_project 9 43409430 43411904 + Gm17540 lincRNA lincRNA MGP_NODShiLtJ_T0092108.1 MGP_NODShiLtJ_G0034672.1 mouse_genomes_project 9 61968203 61989092 - MGP_NODShiLtJ_P0092108 Csk protein_coding protein_coding MGP_NODShiLtJ_T0002315.1 MGP_NODShiLtJ_G0002225.1 mouse_genomes_project 9 77502233 77505443 - TEC TEC MGP_NODShiLtJ_T0091385.1 MGP_NODShiLtJ_G0034395.1 mouse_genomes_project 9 40541398 40546788 + MGP_NODShiLtJ_P0091385 Olfr898 protein_coding protein_coding MGP_NODShiLtJ_T0091423.1 MGP_NODShiLtJ_G0034427.1 mouse_genomes_project 9 41636485 41637471 + MGP_NODShiLtJ_P0091423 Olfr27 protein_coding protein_coding MGP_NODShiLtJ_T0015933.1 MGP_NODShiLtJ_G0014041.1 mouse_genomes_project 9 64011748 64013161 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011640.1 MGP_NODShiLtJ_G0009773.1 mouse_genomes_project 9 129978717 129979024 + Gm22198 misc_RNA misc_RNA MGP_NODShiLtJ_T0094090.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118991570 119005508 - MGP_NODShiLtJ_P0094090 Klhdc8b protein_coding protein_coding MGP_NODShiLtJ_T0094091.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118991592 118996645 - Klhdc8b protein_coding retained_intron MGP_NODShiLtJ_T0094092.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118991592 118994731 - Klhdc8b protein_coding retained_intron MGP_NODShiLtJ_T0094093.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118991592 118996304 - MGP_NODShiLtJ_P0094093 Klhdc8b protein_coding protein_coding MGP_NODShiLtJ_T0094094.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118991766 118996331 - MGP_NODShiLtJ_P0094094 Klhdc8b protein_coding protein_coding MGP_NODShiLtJ_T0094095.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118991907 119005003 - MGP_NODShiLtJ_P0094095 Klhdc8b protein_coding protein_coding MGP_NODShiLtJ_T0094096.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118992202 118994296 - Klhdc8b protein_coding processed_transcript MGP_NODShiLtJ_T0094097.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118995181 118996693 - Klhdc8b protein_coding processed_transcript MGP_NODShiLtJ_T0094098.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118995202 118996728 - Klhdc8b protein_coding retained_intron MGP_NODShiLtJ_T0094099.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118996514 119004856 - Klhdc8b protein_coding processed_transcript MGP_NODShiLtJ_T0094100.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118998599 119004856 - Klhdc8b protein_coding retained_intron MGP_NODShiLtJ_T0094101.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118998601 119000877 - Klhdc8b protein_coding retained_intron MGP_NODShiLtJ_T0094102.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 118998792 119005000 - Klhdc8b protein_coding processed_transcript MGP_NODShiLtJ_T0094103.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 119002362 119004005 - Klhdc8b protein_coding retained_intron MGP_NODShiLtJ_T0094104.1 MGP_NODShiLtJ_G0035097.1 mouse_genomes_project 9 119003159 119004855 - Klhdc8b protein_coding retained_intron MGP_NODShiLtJ_T0015970.1 MGP_NODShiLtJ_G0014078.1 mouse_genomes_project 9 86752806 86753086 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0091060.1 MGP_NODShiLtJ_G0034277.1 mouse_genomes_project 9 22498247 22499427 - MGP_NODShiLtJ_P0091060 Elof1 protein_coding protein_coding MGP_NODShiLtJ_T0091061.1 MGP_NODShiLtJ_G0034277.1 mouse_genomes_project 9 22498248 22506808 - MGP_NODShiLtJ_P0091061 Elof1 protein_coding protein_coding MGP_NODShiLtJ_T0090870.1 MGP_NODShiLtJ_G0034198.1 mouse_genomes_project 9 19224122 19225061 + MGP_NODShiLtJ_P0090870 Olfr851 protein_coding protein_coding MGP_NODShiLtJ_T0093199.1 MGP_NODShiLtJ_G0034934.1 mouse_genomes_project 9 104728098 104735465 - MGP_NODShiLtJ_P0093199 Chst2 protein_coding protein_coding MGP_NODShiLtJ_T0010951.1 MGP_NODShiLtJ_G0009084.1 mouse_genomes_project 9 47539529 47539670 - Gm44335 miRNA miRNA MGP_NODShiLtJ_T0018392.1 MGP_NODShiLtJ_G0015615.1 mouse_genomes_project 9 90580037 90581487 + Gm29054 processed_transcript TEC MGP_NODShiLtJ_T0018393.1 MGP_NODShiLtJ_G0015615.1 mouse_genomes_project 9 90580068 90581404 + Gm29054 processed_transcript antisense MGP_NODShiLtJ_T0093116.1 MGP_NODShiLtJ_G0034915.1 mouse_genomes_project 9 97478189 97482454 + MGP_NODShiLtJ_P0093116 Mthfsl protein_coding protein_coding MGP_NODShiLtJ_T0092137.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62459367 62538161 + Stra6 protein_coding retained_intron MGP_NODShiLtJ_T0092140.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62474883 62537353 + MGP_NODShiLtJ_P0092140 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092141.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62474958 62535566 + MGP_NODShiLtJ_P0092141 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092144.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62525212 62549951 + MGP_NODShiLtJ_P0092144 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092145.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62525473 62549949 + MGP_NODShiLtJ_P0092145 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092146.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62525625 62537002 + MGP_NODShiLtJ_P0092146 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092147.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62528032 62536575 + MGP_NODShiLtJ_P0092147 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092148.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62530152 62537327 + MGP_NODShiLtJ_P0092148 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092149.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62530210 62549992 + MGP_NODShiLtJ_P0092149 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092150.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62530210 62537243 + MGP_NODShiLtJ_P0092150 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092151.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62530670 62537249 + MGP_NODShiLtJ_P0092151 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092152.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62530800 62549992 + MGP_NODShiLtJ_P0092152 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092153.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62530800 62537259 + MGP_NODShiLtJ_P0092153 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0092154.1 MGP_NODShiLtJ_G0034682.1 mouse_genomes_project 9 62530945 62535497 + MGP_NODShiLtJ_P0092154 Stra6 protein_coding protein_coding MGP_NODShiLtJ_T0090666.1 MGP_NODShiLtJ_G0034117.1 mouse_genomes_project 9 3940284 3941804 - MGP_NODShiLtJ_P0090666 Ddi1 protein_coding protein_coding MGP_NODShiLtJ_T0099626.1 MGP_NODShiLtJ_G0038020.1 mouse_genomes_project 9 91768917 91769102 + Gm26146 snRNA snRNA MGP_NODShiLtJ_T0009241.1 MGP_NODShiLtJ_G0007419.1 mouse_genomes_project 9 112739631 112740582 + 4930533D04Rik lincRNA lincRNA MGP_NODShiLtJ_T0094457.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121537687 121599032 + MGP_NODShiLtJ_P0094457 Ccdc12 protein_coding protein_coding MGP_NODShiLtJ_T0094458.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121537709 121538863 + Ccdc12 protein_coding retained_intron MGP_NODShiLtJ_T0094459.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121537714 121588380 + Ccdc12 protein_coding retained_intron MGP_NODShiLtJ_T0094460.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121537722 121598681 + MGP_NODShiLtJ_P0094460 Ccdc12 protein_coding protein_coding MGP_NODShiLtJ_T0094461.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121537726 121596163 + Ccdc12 protein_coding retained_intron MGP_NODShiLtJ_T0094462.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121537796 121598939 + Ccdc12 protein_coding processed_transcript MGP_NODShiLtJ_T0094463.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121554631 121598711 + Ccdc12 protein_coding processed_transcript MGP_NODShiLtJ_T0094464.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121597319 121599013 + MGP_NODShiLtJ_P0094464 Ccdc12 protein_coding protein_coding MGP_NODShiLtJ_T0094465.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121597436 121599019 + Ccdc12 protein_coding retained_intron MGP_NODShiLtJ_T0094466.1 MGP_NODShiLtJ_G0035150.1 mouse_genomes_project 9 121597469 121598890 + Ccdc12 protein_coding retained_intron MGP_NODShiLtJ_T0015960.1 MGP_NODShiLtJ_G0014068.1 mouse_genomes_project 9 82974434 82975188 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010948.1 MGP_NODShiLtJ_G0009081.1 mouse_genomes_project 9 44598198 44598275 + Mir125b-1 miRNA miRNA MGP_NODShiLtJ_T0094835.1 MGP_NODShiLtJ_G0035257.1 mouse_genomes_project 9 134120347 134140276 + MGP_NODShiLtJ_P0094835 Snrk protein_coding protein_coding MGP_NODShiLtJ_T0094836.1 MGP_NODShiLtJ_G0035257.1 mouse_genomes_project 9 134120374 134140384 + MGP_NODShiLtJ_P0094836 Snrk protein_coding protein_coding MGP_NODShiLtJ_T0094837.1 MGP_NODShiLtJ_G0035257.1 mouse_genomes_project 9 134120411 134168026 + MGP_NODShiLtJ_P0094837 Snrk protein_coding protein_coding MGP_NODShiLtJ_T0094838.1 MGP_NODShiLtJ_G0035257.1 mouse_genomes_project 9 134120423 134140231 + MGP_NODShiLtJ_P0094838 Snrk protein_coding protein_coding MGP_NODShiLtJ_T0094839.1 MGP_NODShiLtJ_G0035257.1 mouse_genomes_project 9 134120816 134140076 + Snrk protein_coding processed_transcript MGP_NODShiLtJ_T0094840.1 MGP_NODShiLtJ_G0035257.1 mouse_genomes_project 9 134137032 134171881 + MGP_NODShiLtJ_P0094840 Snrk protein_coding protein_coding MGP_NODShiLtJ_T0094841.1 MGP_NODShiLtJ_G0035257.1 mouse_genomes_project 9 134163196 134168028 + Snrk protein_coding retained_intron MGP_NODShiLtJ_T0094842.1 MGP_NODShiLtJ_G0035257.1 mouse_genomes_project 9 134165505 134168127 + Snrk protein_coding retained_intron MGP_NODShiLtJ_T0090677.1 MGP_NODShiLtJ_G0034121.1 mouse_genomes_project 9 5179282 5184689 + MGP_NODShiLtJ_P0090677 Mmp12 protein_coding protein_coding MGP_NODShiLtJ_T0090678.1 MGP_NODShiLtJ_G0034121.1 mouse_genomes_project 9 5182275 5205374 + MGP_NODShiLtJ_P0090678 Mmp12 protein_coding protein_coding MGP_NODShiLtJ_T0090679.1 MGP_NODShiLtJ_G0034121.1 mouse_genomes_project 9 5182275 5195874 + MGP_NODShiLtJ_P0090679 Mmp12 protein_coding protein_coding MGP_NODShiLtJ_T0090680.1 MGP_NODShiLtJ_G0034121.1 mouse_genomes_project 9 5182307 5193076 + Mmp12 protein_coding retained_intron MGP_NODShiLtJ_T0090681.1 MGP_NODShiLtJ_G0034121.1 mouse_genomes_project 9 5182307 5183235 + Mmp12 protein_coding processed_transcript MGP_NODShiLtJ_T0090682.1 MGP_NODShiLtJ_G0034121.1 mouse_genomes_project 9 5182307 5194301 + MGP_NODShiLtJ_P0090682 Mmp12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0090683.1 MGP_NODShiLtJ_G0034121.1 mouse_genomes_project 9 5182416 5193740 + MGP_NODShiLtJ_P0090683 Mmp12 protein_coding protein_coding MGP_NODShiLtJ_T0093524.1 MGP_NODShiLtJ_G0035006.1 mouse_genomes_project 9 114211891 114232514 - Ackr4 protein_coding processed_transcript MGP_NODShiLtJ_T0093527.1 MGP_NODShiLtJ_G0035006.1 mouse_genomes_project 9 114228075 114262154 - MGP_NODShiLtJ_P0093527 Ackr4 protein_coding protein_coding MGP_NODShiLtJ_T0093528.1 MGP_NODShiLtJ_G0035006.1 mouse_genomes_project 9 114228206 114232973 - MGP_NODShiLtJ_P0093528 Ackr4 protein_coding protein_coding MGP_NODShiLtJ_T0098466.1 MGP_NODShiLtJ_G0036865.1 mouse_genomes_project 9 60412289 60413764 - Gm29322 sense_intronic sense_intronic MGP_NODShiLtJ_T0094301.1 MGP_NODShiLtJ_G0035124.1 mouse_genomes_project 9 119624854 119645605 - MGP_NODShiLtJ_P0094301 protein_coding protein_coding MGP_NODShiLtJ_T0094302.1 MGP_NODShiLtJ_G0035124.1 mouse_genomes_project 9 119645290 119645592 - protein_coding retained_intron MGP_NODShiLtJ_T0091369.1 MGP_NODShiLtJ_G0034380.1 mouse_genomes_project 9 40010851 40011916 + MGP_NODShiLtJ_P0091369 Olfr878 protein_coding protein_coding MGP_NODShiLtJ_T0091278.1 MGP_NODShiLtJ_G0034350.1 mouse_genomes_project 9 38390732 38392307 + MGP_NODShiLtJ_P0091278 Gm9513 protein_coding protein_coding MGP_NODShiLtJ_T0094472.1 MGP_NODShiLtJ_G0035152.1 mouse_genomes_project 9 121630767 121658648 + MGP_NODShiLtJ_P0094472 Myl3 protein_coding protein_coding MGP_NODShiLtJ_T0094473.1 MGP_NODShiLtJ_G0035152.1 mouse_genomes_project 9 121650018 121658943 + MGP_NODShiLtJ_P0094473 Myl3 protein_coding protein_coding MGP_NODShiLtJ_T0094474.1 MGP_NODShiLtJ_G0035152.1 mouse_genomes_project 9 121657929 121659292 + Myl3 protein_coding retained_intron MGP_NODShiLtJ_T0100891.1 MGP_NODShiLtJ_G0039285.1 mouse_genomes_project 9 69116875 69116974 + Snord16a snoRNA snoRNA MGP_NODShiLtJ_T0094056.1 MGP_NODShiLtJ_G0035088.1 mouse_genomes_project 9 118812835 118820506 + MGP_NODShiLtJ_P0094056 Nicn1 protein_coding protein_coding MGP_NODShiLtJ_T0094057.1 MGP_NODShiLtJ_G0035088.1 mouse_genomes_project 9 118812850 118817552 + Nicn1 protein_coding retained_intron MGP_NODShiLtJ_T0094058.1 MGP_NODShiLtJ_G0035088.1 mouse_genomes_project 9 118812861 118817520 + Nicn1 protein_coding processed_transcript MGP_NODShiLtJ_T0094059.1 MGP_NODShiLtJ_G0035088.1 mouse_genomes_project 9 118817862 118818788 + Nicn1 protein_coding retained_intron MGP_NODShiLtJ_T0091030.1 MGP_NODShiLtJ_G0034262.1 mouse_genomes_project 9 22166742 22221902 - MGP_NODShiLtJ_P0091030 Dock6 protein_coding protein_coding MGP_NODShiLtJ_T0091032.1 MGP_NODShiLtJ_G0034262.1 mouse_genomes_project 9 22205237 22216674 - MGP_NODShiLtJ_P0091032 Dock6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0090778.1 MGP_NODShiLtJ_G0034155.1 mouse_genomes_project 9 13695845 13699509 - MGP_NODShiLtJ_P0090778 Fut4 protein_coding protein_coding MGP_NODShiLtJ_T0009157.1 MGP_NODShiLtJ_G0007352.1 mouse_genomes_project 9 48723139 48738163 - 4833428L15Rik lincRNA lincRNA MGP_NODShiLtJ_T0009203.1 MGP_NODShiLtJ_G0007390.1 mouse_genomes_project 9 90678455 90692329 - Gm27216 lincRNA lincRNA MGP_NODShiLtJ_T0009204.1 MGP_NODShiLtJ_G0007390.1 mouse_genomes_project 9 90678465 90692847 - Gm27216 lincRNA lincRNA MGP_NODShiLtJ_T0009205.1 MGP_NODShiLtJ_G0007390.1 mouse_genomes_project 9 90678482 90692794 - Gm27216 lincRNA lincRNA MGP_NODShiLtJ_T0002334.1 MGP_NODShiLtJ_G0002244.1 mouse_genomes_project 9 78797380 78798654 - TEC TEC MGP_NODShiLtJ_T0093981.1 MGP_NODShiLtJ_G0035077.1 mouse_genomes_project 9 118463455 118465112 - MGP_NODShiLtJ_P0093981 Fam212a protein_coding protein_coding MGP_NODShiLtJ_T0093982.1 MGP_NODShiLtJ_G0035077.1 mouse_genomes_project 9 118463865 118464865 - MGP_NODShiLtJ_P0093982 Fam212a protein_coding protein_coding MGP_NODShiLtJ_T0093673.1 MGP_NODShiLtJ_G0035030.1 mouse_genomes_project 9 116767842 116771631 + MGP_NODShiLtJ_P0093673 Abhd14b protein_coding protein_coding MGP_NODShiLtJ_T0093674.1 MGP_NODShiLtJ_G0035030.1 mouse_genomes_project 9 116767846 116771656 + MGP_NODShiLtJ_P0093674 Abhd14b protein_coding protein_coding MGP_NODShiLtJ_T0093675.1 MGP_NODShiLtJ_G0035030.1 mouse_genomes_project 9 116768259 116772152 + MGP_NODShiLtJ_P0093675 Abhd14b protein_coding protein_coding MGP_NODShiLtJ_T0093676.1 MGP_NODShiLtJ_G0035030.1 mouse_genomes_project 9 116768672 116772962 + MGP_NODShiLtJ_P0093676 Abhd14b protein_coding protein_coding MGP_NODShiLtJ_T0093677.1 MGP_NODShiLtJ_G0035030.1 mouse_genomes_project 9 116768707 116772120 + MGP_NODShiLtJ_P0093677 Abhd14b protein_coding protein_coding MGP_NODShiLtJ_T0093678.1 MGP_NODShiLtJ_G0035030.1 mouse_genomes_project 9 116768746 116772092 + MGP_NODShiLtJ_P0093678 Abhd14b protein_coding protein_coding MGP_NODShiLtJ_T0091542.1 MGP_NODShiLtJ_G0034489.1 mouse_genomes_project 9 47290016 47297487 + MGP_NODShiLtJ_P0091542 Mfrp protein_coding protein_coding MGP_NODShiLtJ_T0091543.1 MGP_NODShiLtJ_G0034489.1 mouse_genomes_project 9 47290025 47294807 + MGP_NODShiLtJ_P0091543 Mfrp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091544.1 MGP_NODShiLtJ_G0034489.1 mouse_genomes_project 9 47290041 47297484 + MGP_NODShiLtJ_P0091544 Mfrp protein_coding protein_coding MGP_NODShiLtJ_T0091545.1 MGP_NODShiLtJ_G0034489.1 mouse_genomes_project 9 47290057 47297484 + MGP_NODShiLtJ_P0091545 Mfrp protein_coding protein_coding MGP_NODShiLtJ_T0091546.1 MGP_NODShiLtJ_G0034489.1 mouse_genomes_project 9 47290075 47291585 + MGP_NODShiLtJ_P0091546 Mfrp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0091547.1 MGP_NODShiLtJ_G0034489.1 mouse_genomes_project 9 47293463 47294709 + MGP_NODShiLtJ_P0091547 Mfrp protein_coding protein_coding MGP_NODShiLtJ_T0091356.1 MGP_NODShiLtJ_G0034371.1 mouse_genomes_project 9 39631265 39665494 + MGP_NODShiLtJ_P0091356 Siae protein_coding protein_coding MGP_NODShiLtJ_T0005446.1 MGP_NODShiLtJ_G0004593.1 mouse_genomes_project 9 105442451 105455968 - Gm28085 antisense antisense MGP_NODShiLtJ_T0091272.1 MGP_NODShiLtJ_G0034345.1 mouse_genomes_project 9 37488391 37490454 - MGP_NODShiLtJ_P0091272 D730048I06Rik protein_coding protein_coding MGP_NODShiLtJ_T0092125.1 MGP_NODShiLtJ_G0034678.1 mouse_genomes_project 9 62292500 62312415 + MGP_NODShiLtJ_P0092125 Ubl7 protein_coding protein_coding MGP_NODShiLtJ_T0093863.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118070421 118091855 - MGP_NODShiLtJ_P0093863 Gnai2 protein_coding protein_coding MGP_NODShiLtJ_T0093864.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118070421 118091800 - MGP_NODShiLtJ_P0093864 Gnai2 protein_coding protein_coding MGP_NODShiLtJ_T0093865.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118071236 118072344 - Gnai2 protein_coding retained_intron MGP_NODShiLtJ_T0093866.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118071952 118072808 - Gnai2 protein_coding retained_intron MGP_NODShiLtJ_T0093867.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118072521 118073667 - Gnai2 protein_coding retained_intron MGP_NODShiLtJ_T0093868.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118072796 118083114 - MGP_NODShiLtJ_P0093868 Gnai2 protein_coding protein_coding MGP_NODShiLtJ_T0093869.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118075770 118091822 - Gnai2 protein_coding retained_intron MGP_NODShiLtJ_T0093870.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118076206 118077139 - Gnai2 protein_coding retained_intron MGP_NODShiLtJ_T0093871.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118076328 118091825 - MGP_NODShiLtJ_P0093871 Gnai2 protein_coding protein_coding MGP_NODShiLtJ_T0093872.1 MGP_NODShiLtJ_G0035064.1 mouse_genomes_project 9 118091587 118091831 - MGP_NODShiLtJ_P0093872 Gnai2 protein_coding protein_coding MGP_NODShiLtJ_T0091963.1 MGP_NODShiLtJ_G0034623.1 mouse_genomes_project 9 58552717 58570809 - MGP_NODShiLtJ_P0091963 Cib2 protein_coding protein_coding MGP_NODShiLtJ_T0015996.1 MGP_NODShiLtJ_G0014104.1 mouse_genomes_project 9 99174997 99175598 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0094792.1 MGP_NODShiLtJ_G0035242.1 mouse_genomes_project 9 133562374 133632140 - MGP_NODShiLtJ_P0094792 Lyzl4 protein_coding protein_coding MGP_NODShiLtJ_T0094793.1 MGP_NODShiLtJ_G0035242.1 mouse_genomes_project 9 133562380 133632670 - MGP_NODShiLtJ_P0094793 Lyzl4 protein_coding protein_coding MGP_NODShiLtJ_T0094794.1 MGP_NODShiLtJ_G0035242.1 mouse_genomes_project 9 133568618 133632100 - MGP_NODShiLtJ_P0094794 Lyzl4 protein_coding protein_coding MGP_NODShiLtJ_T0091129.1 MGP_NODShiLtJ_G0034303.1 mouse_genomes_project 9 27964706 27976801 + MGP_NODShiLtJ_P0091129 Thyn1 protein_coding protein_coding MGP_NODShiLtJ_T0093459.1 MGP_NODShiLtJ_G0034991.1 mouse_genomes_project 9 112892141 112967211 + MGP_NODShiLtJ_P0093459 Ryk protein_coding protein_coding MGP_NODShiLtJ_T0093460.1 MGP_NODShiLtJ_G0034991.1 mouse_genomes_project 9 112892196 112967622 + MGP_NODShiLtJ_P0093460 Ryk protein_coding protein_coding MGP_NODShiLtJ_T0093461.1 MGP_NODShiLtJ_G0034991.1 mouse_genomes_project 9 112892206 112967974 + MGP_NODShiLtJ_P0093461 Ryk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093462.1 MGP_NODShiLtJ_G0034991.1 mouse_genomes_project 9 112902987 112918472 + Ryk protein_coding processed_transcript MGP_NODShiLtJ_T0093463.1 MGP_NODShiLtJ_G0034991.1 mouse_genomes_project 9 112926378 112940255 + Ryk protein_coding retained_intron MGP_NODShiLtJ_T0093464.1 MGP_NODShiLtJ_G0034991.1 mouse_genomes_project 9 112958239 112959230 + Ryk protein_coding retained_intron MGP_NODShiLtJ_T0015902.1 MGP_NODShiLtJ_G0014010.1 mouse_genomes_project 9 11761919 11762904 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011643.1 MGP_NODShiLtJ_G0009776.1 mouse_genomes_project 9 134858733 134859001 + Gm25341 misc_RNA misc_RNA MGP_NODShiLtJ_T0090864.1 MGP_NODShiLtJ_G0034192.1 mouse_genomes_project 9 19010651 19011581 + MGP_NODShiLtJ_P0090864 protein_coding protein_coding MGP_NODShiLtJ_T0090720.1 MGP_NODShiLtJ_G0034137.1 mouse_genomes_project 9 6517348 6668576 + MGP_NODShiLtJ_P0090720 Trpc6 protein_coding protein_coding MGP_NODShiLtJ_T0015929.1 MGP_NODShiLtJ_G0014037.1 mouse_genomes_project 9 53851365 53852368 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009159.1 MGP_NODShiLtJ_G0007354.1 mouse_genomes_project 9 50330017 50345841 + 2900052N01Rik lincRNA lincRNA MGP_NODShiLtJ_T0009160.1 MGP_NODShiLtJ_G0007354.1 mouse_genomes_project 9 50330127 50345841 + 2900052N01Rik lincRNA lincRNA MGP_NODShiLtJ_T0009161.1 MGP_NODShiLtJ_G0007354.1 mouse_genomes_project 9 50330151 50341032 + 2900052N01Rik lincRNA lincRNA MGP_NODShiLtJ_T0093849.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118053971 118061813 - MGP_NODShiLtJ_P0093849 Sema3b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093850.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118054514 118065522 - MGP_NODShiLtJ_P0093850 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093851.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118054650 118065492 - MGP_NODShiLtJ_P0093851 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093852.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118054651 118062950 - MGP_NODShiLtJ_P0093852 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093853.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118054652 118065486 - MGP_NODShiLtJ_P0093853 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093854.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118054652 118061694 - MGP_NODShiLtJ_P0093854 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093855.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118056105 118057609 - Sema3b protein_coding retained_intron MGP_NODShiLtJ_T0093856.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118057917 118058469 - Sema3b protein_coding retained_intron MGP_NODShiLtJ_T0093857.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118059454 118061561 - MGP_NODShiLtJ_P0093857 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093858.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118059609 118063210 - MGP_NODShiLtJ_P0093858 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093859.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118059641 118062977 - MGP_NODShiLtJ_P0093859 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093860.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118060461 118062975 - MGP_NODShiLtJ_P0093860 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093861.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118061350 118065513 - MGP_NODShiLtJ_P0093861 Sema3b protein_coding protein_coding MGP_NODShiLtJ_T0093862.1 MGP_NODShiLtJ_G0035063.1 mouse_genomes_project 9 118061394 118063479 - Sema3b protein_coding processed_transcript MGP_NODShiLtJ_T0091431.1 MGP_NODShiLtJ_G0034435.1 mouse_genomes_project 9 42197156 42198098 - MGP_NODShiLtJ_P0091431 Olfr958 protein_coding protein_coding MGP_NODShiLtJ_T0094624.1 MGP_NODShiLtJ_G0035190.1 mouse_genomes_project 9 126088912 126129202 + MGP_NODShiLtJ_P0094624 Dync1li1 protein_coding protein_coding MGP_NODShiLtJ_T0002424.1 MGP_NODShiLtJ_G0002333.1 mouse_genomes_project 9 122373365 122374845 + TEC TEC MGP_NODShiLtJ_T0093382.1 MGP_NODShiLtJ_G0034977.1 mouse_genomes_project 9 110315947 110346925 - MGP_NODShiLtJ_P0093382 Il20rb protein_coding protein_coding MGP_NODShiLtJ_T0093383.1 MGP_NODShiLtJ_G0034977.1 mouse_genomes_project 9 110315949 110326041 - Il20rb protein_coding retained_intron MGP_NODShiLtJ_T0093384.1 MGP_NODShiLtJ_G0034977.1 mouse_genomes_project 9 110316032 110319990 - Il20rb protein_coding processed_transcript MGP_NODShiLtJ_T0093385.1 MGP_NODShiLtJ_G0034977.1 mouse_genomes_project 9 110316758 110319962 - Il20rb protein_coding retained_intron MGP_NODShiLtJ_T0093386.1 MGP_NODShiLtJ_G0034977.1 mouse_genomes_project 9 110317305 110329758 - Il20rb protein_coding processed_transcript MGP_NODShiLtJ_T0093387.1 MGP_NODShiLtJ_G0034977.1 mouse_genomes_project 9 110324873 110346522 - Il20rb protein_coding retained_intron MGP_NODShiLtJ_T0009170.1 MGP_NODShiLtJ_G0007363.1 mouse_genomes_project 9 62889444 62904155 + 4930461G14Rik lincRNA lincRNA MGP_NODShiLtJ_T0092427.1 MGP_NODShiLtJ_G0034760.1 mouse_genomes_project 9 70681923 70691809 + MGP_NODShiLtJ_P0092427 Pif1 protein_coding protein_coding MGP_NODShiLtJ_T0092428.1 MGP_NODShiLtJ_G0034760.1 mouse_genomes_project 9 70681945 70682601 + MGP_NODShiLtJ_P0092428 Pif1 protein_coding protein_coding MGP_NODShiLtJ_T0092429.1 MGP_NODShiLtJ_G0034760.1 mouse_genomes_project 9 70681956 70691807 + MGP_NODShiLtJ_P0092429 Pif1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0092430.1 MGP_NODShiLtJ_G0034760.1 mouse_genomes_project 9 70681968 70685256 + Pif1 protein_coding retained_intron MGP_NODShiLtJ_T0092431.1 MGP_NODShiLtJ_G0034760.1 mouse_genomes_project 9 70681968 70691812 + MGP_NODShiLtJ_P0092431 Pif1 protein_coding protein_coding MGP_NODShiLtJ_T0092432.1 MGP_NODShiLtJ_G0034760.1 mouse_genomes_project 9 70681976 70691812 + Pif1 protein_coding retained_intron MGP_NODShiLtJ_T0092433.1 MGP_NODShiLtJ_G0034760.1 mouse_genomes_project 9 70681984 70691812 + MGP_NODShiLtJ_P0092433 Pif1 protein_coding protein_coding MGP_NODShiLtJ_T0092434.1 MGP_NODShiLtJ_G0034760.1 mouse_genomes_project 9 70681989 70683044 + MGP_NODShiLtJ_P0092434 Pif1 protein_coding protein_coding MGP_NODShiLtJ_T0092413.1 MGP_NODShiLtJ_G0034751.1 mouse_genomes_project 9 70411908 70425765 + MGP_NODShiLtJ_P0092413 Pdcd7 protein_coding protein_coding MGP_NODShiLtJ_T0099599.1 MGP_NODShiLtJ_G0037993.1 mouse_genomes_project 9 49214963 49215062 - Gm24646 snRNA snRNA MGP_NODShiLtJ_T0002369.1 MGP_NODShiLtJ_G0002278.1 mouse_genomes_project 9 105443974 105446201 + TEC TEC MGP_NODShiLtJ_T0091820.1 MGP_NODShiLtJ_G0034581.1 mouse_genomes_project 9 54290736 54302749 - MGP_NODShiLtJ_P0091820 AU019823 protein_coding protein_coding MGP_NODShiLtJ_T0091821.1 MGP_NODShiLtJ_G0034581.1 mouse_genomes_project 9 54290740 54302749 - MGP_NODShiLtJ_P0091821 AU019823 protein_coding protein_coding MGP_NODShiLtJ_T0091822.1 MGP_NODShiLtJ_G0034581.1 mouse_genomes_project 9 54293055 54302552 - MGP_NODShiLtJ_P0091822 AU019823 protein_coding protein_coding MGP_NODShiLtJ_T0091823.1 MGP_NODShiLtJ_G0034581.1 mouse_genomes_project 9 54293164 54302566 - MGP_NODShiLtJ_P0091823 AU019823 protein_coding protein_coding MGP_NODShiLtJ_T0091824.1 MGP_NODShiLtJ_G0034581.1 mouse_genomes_project 9 54293197 54302549 - MGP_NODShiLtJ_P0091824 AU019823 protein_coding protein_coding MGP_NODShiLtJ_T0015919.1 MGP_NODShiLtJ_G0014027.1 mouse_genomes_project 9 37225822 37226111 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002307.1 MGP_NODShiLtJ_G0002217.1 mouse_genomes_project 9 36154908 36155819 + TEC TEC MGP_NODShiLtJ_T0015963.1 MGP_NODShiLtJ_G0014071.1 mouse_genomes_project 9 83254173 83254471 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0093679.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116773326 116782033 + MGP_NODShiLtJ_P0093679 Pcbp4 protein_coding protein_coding MGP_NODShiLtJ_T0093680.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116773442 116781017 + Pcbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0093681.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116774783 116775778 + Pcbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0093682.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116774828 116784783 + MGP_NODShiLtJ_P0093682 Pcbp4 protein_coding protein_coding MGP_NODShiLtJ_T0093683.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116774858 116781459 + Pcbp4 protein_coding retained_intron MGP_NODShiLtJ_T0093684.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116774871 116782712 + MGP_NODShiLtJ_P0093684 Pcbp4 protein_coding protein_coding MGP_NODShiLtJ_T0093685.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116776624 116777380 + Pcbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0093686.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116777037 116782017 + MGP_NODShiLtJ_P0093686 Pcbp4 protein_coding protein_coding MGP_NODShiLtJ_T0093687.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116781336 116781807 + Pcbp4 protein_coding retained_intron MGP_NODShiLtJ_T0093688.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116781598 116782275 + MGP_NODShiLtJ_P0093688 Pcbp4 protein_coding protein_coding MGP_NODShiLtJ_T0093689.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116781994 116784320 + MGP_NODShiLtJ_P0093689 Pcbp4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0093690.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116782210 116782949 + Pcbp4 protein_coding retained_intron MGP_NODShiLtJ_T0093691.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116782235 116783733 + MGP_NODShiLtJ_P0093691 Pcbp4 protein_coding protein_coding MGP_NODShiLtJ_T0093692.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116782530 116783199 + Pcbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0093693.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116782657 116784466 + MGP_NODShiLtJ_P0093693 Pcbp4 protein_coding protein_coding MGP_NODShiLtJ_T0093694.1 MGP_NODShiLtJ_G0035031.1 mouse_genomes_project 9 116782840 116783459 + Pcbp4 protein_coding retained_intron MGP_NODShiLtJ_T0092175.1 MGP_NODShiLtJ_G0034687.1 mouse_genomes_project 9 62708411 62738300 - MGP_NODShiLtJ_P0092175 Loxl1 protein_coding protein_coding MGP_NODShiLtJ_T0015959.1 MGP_NODShiLtJ_G0014067.1 mouse_genomes_project 9 81796010 81797696 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009724.1 MGP_NODShiLtJ_G0007857.1 mouse_genomes_project 12 97131965 97132044 - Mir3068 miRNA miRNA MGP_NODShiLtJ_T0035176.1 MGP_NODShiLtJ_G0019800.1 mouse_genomes_project 12 94263848 94362155 - MGP_NODShiLtJ_P0035176 Ltbp2 protein_coding protein_coding MGP_NODShiLtJ_T0035177.1 MGP_NODShiLtJ_G0019800.1 mouse_genomes_project 12 94263849 94362118 - MGP_NODShiLtJ_P0035177 Ltbp2 protein_coding protein_coding MGP_NODShiLtJ_T0035178.1 MGP_NODShiLtJ_G0019800.1 mouse_genomes_project 12 94263965 94362102 - MGP_NODShiLtJ_P0035178 Ltbp2 protein_coding protein_coding MGP_NODShiLtJ_T0035179.1 MGP_NODShiLtJ_G0019800.1 mouse_genomes_project 12 94265842 94272484 - MGP_NODShiLtJ_P0035179 Ltbp2 protein_coding protein_coding MGP_NODShiLtJ_T0035180.1 MGP_NODShiLtJ_G0019800.1 mouse_genomes_project 12 94267015 94273612 - MGP_NODShiLtJ_P0035180 Ltbp2 protein_coding protein_coding MGP_NODShiLtJ_T0035181.1 MGP_NODShiLtJ_G0019800.1 mouse_genomes_project 12 94272499 94280104 - MGP_NODShiLtJ_P0035181 Ltbp2 protein_coding protein_coding MGP_NODShiLtJ_T0035182.1 MGP_NODShiLtJ_G0019800.1 mouse_genomes_project 12 94288353 94362114 - Ltbp2 protein_coding retained_intron MGP_NODShiLtJ_T0034557.1 MGP_NODShiLtJ_G0019578.1 mouse_genomes_project 12 55358788 55371220 + MGP_NODShiLtJ_P0034557 Coch protein_coding protein_coding MGP_NODShiLtJ_T0034558.1 MGP_NODShiLtJ_G0019578.1 mouse_genomes_project 12 55358788 55371220 + MGP_NODShiLtJ_P0034558 Coch protein_coding protein_coding MGP_NODShiLtJ_T0034366.1 MGP_NODShiLtJ_G0019510.1 mouse_genomes_project 12 29503727 29723507 - MGP_NODShiLtJ_P0034366 Sntg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034367.1 MGP_NODShiLtJ_G0019510.1 mouse_genomes_project 12 29503728 29723554 - MGP_NODShiLtJ_P0034367 Sntg2 protein_coding protein_coding MGP_NODShiLtJ_T0034368.1 MGP_NODShiLtJ_G0019510.1 mouse_genomes_project 12 29504235 29723444 - MGP_NODShiLtJ_P0034368 Sntg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034369.1 MGP_NODShiLtJ_G0019510.1 mouse_genomes_project 12 29504240 29723507 - MGP_NODShiLtJ_P0034369 Sntg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034370.1 MGP_NODShiLtJ_G0019510.1 mouse_genomes_project 12 29524342 29530637 - Sntg2 protein_coding retained_intron MGP_NODShiLtJ_T0034371.1 MGP_NODShiLtJ_G0019510.1 mouse_genomes_project 12 29599578 29705326 - Sntg2 protein_coding processed_transcript MGP_NODShiLtJ_T0034372.1 MGP_NODShiLtJ_G0019510.1 mouse_genomes_project 12 29642527 29723522 - Sntg2 protein_coding processed_transcript MGP_NODShiLtJ_T0000063.1 MGP_NODShiLtJ_G0000050.1 mouse_genomes_project 12 127660042 127660502 - MGP_NODShiLtJ_P0000063 Ighv5-12-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0009811.1 MGP_NODShiLtJ_G0007944.1 mouse_genomes_project 12 126605848 126605907 - Mir6941 miRNA miRNA MGP_NODShiLtJ_T0034468.1 MGP_NODShiLtJ_G0019546.1 mouse_genomes_project 12 36119661 36121112 + MGP_NODShiLtJ_P0034468 Gm5434 protein_coding protein_coding MGP_NODShiLtJ_T0035693.1 MGP_NODShiLtJ_G0019964.1 mouse_genomes_project 12 122930848 122945010 - MGP_NODShiLtJ_P0035693 Rtl1 protein_coding protein_coding MGP_NODShiLtJ_T0035589.1 MGP_NODShiLtJ_G0019929.1 mouse_genomes_project 12 117497184 117562274 - MGP_NODShiLtJ_P0035589 Dicer1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035707.1 MGP_NODShiLtJ_G0019968.1 mouse_genomes_project 12 124100110 124115031 - MGP_NODShiLtJ_P0035707 1700001K19Rik protein_coding protein_coding MGP_NODShiLtJ_T0034652.1 MGP_NODShiLtJ_G0019622.1 mouse_genomes_project 12 63757037 63776658 - MGP_NODShiLtJ_P0034652 Trappc6b protein_coding protein_coding MGP_NODShiLtJ_T0034454.1 MGP_NODShiLtJ_G0019539.1 mouse_genomes_project 12 34758594 34759649 - MGP_NODShiLtJ_P0034454 protein_coding protein_coding MGP_NODShiLtJ_T0034841.1 MGP_NODShiLtJ_G0019688.1 mouse_genomes_project 12 81262737 81276539 - MGP_NODShiLtJ_P0034841 Six4 protein_coding protein_coding MGP_NODShiLtJ_T0034842.1 MGP_NODShiLtJ_G0019688.1 mouse_genomes_project 12 81266570 81276570 - MGP_NODShiLtJ_P0034842 Six4 protein_coding protein_coding MGP_NODShiLtJ_T0000262.1 MGP_NODShiLtJ_G0000200.1 mouse_genomes_project 12 129069046 129069474 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035835.1 MGP_NODShiLtJ_G0020010.1 mouse_genomes_project 12 126437496 126466563 - MGP_NODShiLtJ_P0035835 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035836.1 MGP_NODShiLtJ_G0020010.1 mouse_genomes_project 12 126437503 126443838 - MGP_NODShiLtJ_P0035836 protein_coding protein_coding MGP_NODShiLtJ_T0035837.1 MGP_NODShiLtJ_G0020010.1 mouse_genomes_project 12 126437743 126440564 - MGP_NODShiLtJ_P0035837 protein_coding protein_coding MGP_NODShiLtJ_T0099995.1 MGP_NODShiLtJ_G0038389.1 mouse_genomes_project 12 60899696 60899828 + Gm25760 snoRNA snoRNA MGP_NODShiLtJ_T0034985.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998053 90003142 + MGP_NODShiLtJ_P0034985 Srsf5 protein_coding protein_coding MGP_NODShiLtJ_T0034986.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998069 90003138 + Srsf5 protein_coding retained_intron MGP_NODShiLtJ_T0034987.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998069 90003138 + MGP_NODShiLtJ_P0034987 Srsf5 protein_coding protein_coding MGP_NODShiLtJ_T0034988.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998081 90003138 + Srsf5 protein_coding retained_intron MGP_NODShiLtJ_T0034989.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998081 90003138 + MGP_NODShiLtJ_P0034989 Srsf5 protein_coding protein_coding MGP_NODShiLtJ_T0034990.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998081 90003138 + MGP_NODShiLtJ_P0034990 Srsf5 protein_coding protein_coding MGP_NODShiLtJ_T0034991.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998083 89999398 + Srsf5 protein_coding processed_transcript MGP_NODShiLtJ_T0034992.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998097 90001054 + Srsf5 protein_coding processed_transcript MGP_NODShiLtJ_T0034993.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998119 90000078 + MGP_NODShiLtJ_P0034993 Srsf5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034994.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998128 89999520 + Srsf5 protein_coding processed_transcript MGP_NODShiLtJ_T0034995.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998134 90003138 + MGP_NODShiLtJ_P0034995 Srsf5 protein_coding protein_coding MGP_NODShiLtJ_T0034996.1 MGP_NODShiLtJ_G0019749.1 mouse_genomes_project 12 89998925 90003050 + Srsf5 protein_coding retained_intron MGP_NODShiLtJ_T0034465.1 MGP_NODShiLtJ_G0019545.1 mouse_genomes_project 12 36030586 36065671 - MGP_NODShiLtJ_P0034465 Tspan13 protein_coding protein_coding MGP_NODShiLtJ_T0034466.1 MGP_NODShiLtJ_G0019545.1 mouse_genomes_project 12 36040031 36065682 - MGP_NODShiLtJ_P0034466 Tspan13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034467.1 MGP_NODShiLtJ_G0019545.1 mouse_genomes_project 12 36040042 36063116 - MGP_NODShiLtJ_P0034467 Tspan13 protein_coding protein_coding MGP_NODShiLtJ_T0034593.1 MGP_NODShiLtJ_G0019596.1 mouse_genomes_project 12 59181127 59419725 - MGP_NODShiLtJ_P0034593 protein_coding protein_coding MGP_NODShiLtJ_T0034594.1 MGP_NODShiLtJ_G0019596.1 mouse_genomes_project 12 59181142 59190412 - protein_coding retained_intron MGP_NODShiLtJ_T0034595.1 MGP_NODShiLtJ_G0019596.1 mouse_genomes_project 12 59190064 59419723 - protein_coding retained_intron MGP_NODShiLtJ_T0006338.1 MGP_NODShiLtJ_G0005279.1 mouse_genomes_project 12 29763676 29824846 - 2310016D03Rik lincRNA lincRNA MGP_NODShiLtJ_T0012725.1 MGP_NODShiLtJ_G0010833.1 mouse_genomes_project 12 114186460 114186920 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000032.1 MGP_NODShiLtJ_G0000026.1 mouse_genomes_project 12 127190341 127190395 - MGP_NODShiLtJ_P0000032 Ighj4 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0035810.1 MGP_NODShiLtJ_G0019999.1 mouse_genomes_project 12 125750500 125788062 + MGP_NODShiLtJ_P0035810 Kif26a protein_coding protein_coding MGP_NODShiLtJ_T0035811.1 MGP_NODShiLtJ_G0019999.1 mouse_genomes_project 12 125783445 125784825 + Kif26a protein_coding processed_transcript MGP_NODShiLtJ_T0011214.1 MGP_NODShiLtJ_G0009347.1 mouse_genomes_project 12 49340781 49341030 - Gm25051 misc_RNA misc_RNA MGP_NODShiLtJ_T0035699.1 MGP_NODShiLtJ_G0019967.1 mouse_genomes_project 12 124027991 124099367 + MGP_NODShiLtJ_P0035699 Dync1h1 protein_coding protein_coding MGP_NODShiLtJ_T0035700.1 MGP_NODShiLtJ_G0019967.1 mouse_genomes_project 12 124068045 124069056 + Dync1h1 protein_coding retained_intron MGP_NODShiLtJ_T0035701.1 MGP_NODShiLtJ_G0019967.1 mouse_genomes_project 12 124086514 124090519 + MGP_NODShiLtJ_P0035701 Dync1h1 protein_coding protein_coding MGP_NODShiLtJ_T0035702.1 MGP_NODShiLtJ_G0019967.1 mouse_genomes_project 12 124088756 124089695 + Dync1h1 protein_coding retained_intron MGP_NODShiLtJ_T0035703.1 MGP_NODShiLtJ_G0019967.1 mouse_genomes_project 12 124091443 124092388 + Dync1h1 protein_coding retained_intron MGP_NODShiLtJ_T0035704.1 MGP_NODShiLtJ_G0019967.1 mouse_genomes_project 12 124093072 124093882 + Dync1h1 protein_coding retained_intron MGP_NODShiLtJ_T0035705.1 MGP_NODShiLtJ_G0019967.1 mouse_genomes_project 12 124093345 124093913 + Dync1h1 protein_coding retained_intron MGP_NODShiLtJ_T0035706.1 MGP_NODShiLtJ_G0019967.1 mouse_genomes_project 12 124095600 124097286 + Dync1h1 protein_coding retained_intron MGP_NODShiLtJ_T0003356.1 MGP_NODShiLtJ_G0003078.1 mouse_genomes_project 12 90619385 90629404 + antisense antisense MGP_NODShiLtJ_T0034778.1 MGP_NODShiLtJ_G0019667.1 mouse_genomes_project 12 78917048 78953249 + MGP_NODShiLtJ_P0034778 Actr10 protein_coding protein_coding MGP_NODShiLtJ_T0034617.1 MGP_NODShiLtJ_G0019610.1 mouse_genomes_project 12 60870809 60873934 - MGP_NODShiLtJ_P0034617 Nkx2-1 protein_coding protein_coding MGP_NODShiLtJ_T0034618.1 MGP_NODShiLtJ_G0019610.1 mouse_genomes_project 12 60870809 60875664 - MGP_NODShiLtJ_P0034618 Nkx2-1 protein_coding protein_coding MGP_NODShiLtJ_T0098777.1 MGP_NODShiLtJ_G0037171.1 mouse_genomes_project 12 89639684 89639788 - Gm23817 snRNA snRNA MGP_NODShiLtJ_T0034898.1 MGP_NODShiLtJ_G0019708.1 mouse_genomes_project 12 84718462 84764163 - MGP_NODShiLtJ_P0034898 Tex21 protein_coding protein_coding MGP_NODShiLtJ_T0034578.1 MGP_NODShiLtJ_G0019591.1 mouse_genomes_project 12 58745219 58768233 - MGP_NODShiLtJ_P0034578 Eapp protein_coding protein_coding MGP_NODShiLtJ_T0034579.1 MGP_NODShiLtJ_G0019591.1 mouse_genomes_project 12 58745336 58768196 - MGP_NODShiLtJ_P0034579 Eapp protein_coding protein_coding MGP_NODShiLtJ_T0034580.1 MGP_NODShiLtJ_G0019591.1 mouse_genomes_project 12 58756785 58768255 - MGP_NODShiLtJ_P0034580 Eapp protein_coding protein_coding MGP_NODShiLtJ_T0034581.1 MGP_NODShiLtJ_G0019591.1 mouse_genomes_project 12 58760976 58768274 - MGP_NODShiLtJ_P0034581 Eapp protein_coding protein_coding MGP_NODShiLtJ_T0098765.1 MGP_NODShiLtJ_G0037159.1 mouse_genomes_project 12 69920736 69920843 + Gm24921 snRNA snRNA MGP_NODShiLtJ_T0000027.1 MGP_NODShiLtJ_G0000021.1 mouse_genomes_project 12 127301682 127301699 - MGP_NODShiLtJ_P0000027 Ighd3-1 IG_D_gene IG_D_gene MGP_NODShiLtJ_T0034157.1 MGP_NODShiLtJ_G0019432.1 mouse_genomes_project 12 1856411 1865524 + MGP_NODShiLtJ_P0034157 BC068281 protein_coding protein_coding MGP_NODShiLtJ_T0034158.1 MGP_NODShiLtJ_G0019432.1 mouse_genomes_project 12 1862756 1871335 + MGP_NODShiLtJ_P0034158 BC068281 protein_coding protein_coding MGP_NODShiLtJ_T0009745.1 MGP_NODShiLtJ_G0007878.1 mouse_genomes_project 12 122927976 122928070 + Mir665 miRNA miRNA MGP_NODShiLtJ_T0000120.1 MGP_NODShiLtJ_G0000090.1 mouse_genomes_project 12 128872750 128873044 - MGP_NODShiLtJ_P0000120 Ighv1-16 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0006384.1 MGP_NODShiLtJ_G0005317.1 mouse_genomes_project 12 113089830 113097963 + A630072L19Rik lincRNA lincRNA MGP_NODShiLtJ_T0006376.1 MGP_NODShiLtJ_G0005309.1 mouse_genomes_project 12 97012773 97015693 + Gm26764 lincRNA lincRNA MGP_NODShiLtJ_T0003367.1 MGP_NODShiLtJ_G0003088.1 mouse_genomes_project 12 114430800 114432900 - Gm16339 antisense antisense MGP_NODShiLtJ_T0006379.1 MGP_NODShiLtJ_G0005312.1 mouse_genomes_project 12 100913324 101134845 - 4930544I03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006422.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123080766 123101258 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006423.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123080767 123081841 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006424.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123081271 123101258 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006425.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123081958 123101260 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006426.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123085987 123095731 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006427.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123085987 123101258 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006428.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123085991 123099996 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006429.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123089710 123092060 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006430.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123089788 123093500 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006431.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123095798 123101258 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006432.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123099724 123101255 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0006433.1 MGP_NODShiLtJ_G0005340.1 mouse_genomes_project 12 123099785 123101258 + Mirg lincRNA lincRNA MGP_NODShiLtJ_T0035574.1 MGP_NODShiLtJ_G0019920.1 mouse_genomes_project 12 116842539 116990239 + MGP_NODShiLtJ_P0035574 protein_coding protein_coding MGP_NODShiLtJ_T0035579.1 MGP_NODShiLtJ_G0019920.1 mouse_genomes_project 12 116916631 116985299 + protein_coding retained_intron MGP_NODShiLtJ_T0035224.1 MGP_NODShiLtJ_G0019814.1 mouse_genomes_project 12 94857195 94892346 - MGP_NODShiLtJ_P0035224 Tmed10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006385.1 MGP_NODShiLtJ_G0005318.1 mouse_genomes_project 12 113238738 113244988 + D130020L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0000850.1 MGP_NODShiLtJ_G0000780.1 mouse_genomes_project 12 125971320 125974051 - TEC TEC MGP_NODShiLtJ_T0000134.1 MGP_NODShiLtJ_G0000099.1 mouse_genomes_project 12 130270090 130801149 - MGP_NODShiLtJ_P0000134 Ighv1-66 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0099992.1 MGP_NODShiLtJ_G0038386.1 mouse_genomes_project 12 52943170 52943298 - Gm25015 snoRNA snoRNA MGP_NODShiLtJ_T0034854.1 MGP_NODShiLtJ_G0019692.1 mouse_genomes_project 12 81548998 81558231 - MGP_NODShiLtJ_P0034854 D830013O20Rik protein_coding protein_coding MGP_NODShiLtJ_T0035818.1 MGP_NODShiLtJ_G0020005.1 mouse_genomes_project 12 126289069 126293394 + MGP_NODShiLtJ_P0035818 Siva1 protein_coding protein_coding MGP_NODShiLtJ_T0035819.1 MGP_NODShiLtJ_G0020005.1 mouse_genomes_project 12 126289069 126293394 + MGP_NODShiLtJ_P0035819 Siva1 protein_coding protein_coding MGP_NODShiLtJ_T0009803.1 MGP_NODShiLtJ_G0007936.1 mouse_genomes_project 12 123099699 123099782 + Mir3072 miRNA miRNA MGP_NODShiLtJ_T0034151.1 MGP_NODShiLtJ_G0019427.1 mouse_genomes_project 12 1720203 1747740 - MGP_NODShiLtJ_P0034151 Fam228a protein_coding protein_coding MGP_NODShiLtJ_T0000077.1 MGP_NODShiLtJ_G0000061.1 mouse_genomes_project 12 128072269 128072841 - MGP_NODShiLtJ_P0000077 Ighv11-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035893.1 MGP_NODShiLtJ_G0020029.1 mouse_genomes_project 12 131078692 131195550 + MGP_NODShiLtJ_P0035893 Esyt2 protein_coding protein_coding MGP_NODShiLtJ_T0035475.1 MGP_NODShiLtJ_G0019885.1 mouse_genomes_project 12 114431726 114581712 + MGP_NODShiLtJ_P0035475 Slc24a4 protein_coding protein_coding MGP_NODShiLtJ_T0035476.1 MGP_NODShiLtJ_G0019885.1 mouse_genomes_project 12 114432167 114581370 + MGP_NODShiLtJ_P0035476 Slc24a4 protein_coding protein_coding MGP_NODShiLtJ_T0035477.1 MGP_NODShiLtJ_G0019885.1 mouse_genomes_project 12 114432383 114581118 + MGP_NODShiLtJ_P0035477 Slc24a4 protein_coding protein_coding MGP_NODShiLtJ_T0012721.1 MGP_NODShiLtJ_G0010829.1 mouse_genomes_project 12 112876353 112876597 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098266.1 MGP_NODShiLtJ_G0036675.1 mouse_genomes_project 12 46988635 47003269 - Gm15902 sense_intronic sense_intronic MGP_NODShiLtJ_T0017176.1 MGP_NODShiLtJ_G0015100.1 mouse_genomes_project 12 47555604 47560169 + Gm9921 processed_transcript processed_transcript MGP_NODShiLtJ_T0003335.1 MGP_NODShiLtJ_G0003061.1 mouse_genomes_project 12 30980951 30981883 + Gm29542 antisense antisense MGP_NODShiLtJ_T0035502.1 MGP_NODShiLtJ_G0019896.1 mouse_genomes_project 12 115116724 115138968 + MGP_NODShiLtJ_P0035502 Ubr7 protein_coding protein_coding MGP_NODShiLtJ_T0000848.1 MGP_NODShiLtJ_G0000778.1 mouse_genomes_project 12 116569336 116571803 - TEC TEC MGP_NODShiLtJ_T0034356.1 MGP_NODShiLtJ_G0019508.1 mouse_genomes_project 12 29271799 29352541 + MGP_NODShiLtJ_P0034356 Pxdn protein_coding protein_coding MGP_NODShiLtJ_T0034357.1 MGP_NODShiLtJ_G0019508.1 mouse_genomes_project 12 29271813 29321762 + Pxdn protein_coding retained_intron MGP_NODShiLtJ_T0034358.1 MGP_NODShiLtJ_G0019508.1 mouse_genomes_project 12 29271813 29321210 + MGP_NODShiLtJ_P0034358 Pxdn protein_coding protein_coding MGP_NODShiLtJ_T0034359.1 MGP_NODShiLtJ_G0019508.1 mouse_genomes_project 12 29271897 29352542 + MGP_NODShiLtJ_P0034359 Pxdn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034360.1 MGP_NODShiLtJ_G0019508.1 mouse_genomes_project 12 29328699 29334593 + Pxdn protein_coding processed_transcript MGP_NODShiLtJ_T0034361.1 MGP_NODShiLtJ_G0019508.1 mouse_genomes_project 12 29328705 29332044 + Pxdn protein_coding retained_intron MGP_NODShiLtJ_T0034362.1 MGP_NODShiLtJ_G0019508.1 mouse_genomes_project 12 29332072 29334735 + Pxdn protein_coding retained_intron MGP_NODShiLtJ_T0035727.1 MGP_NODShiLtJ_G0019974.1 mouse_genomes_project 12 124363137 124450564 + MGP_NODShiLtJ_P0035727 Tecpr2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034232.1 MGP_NODShiLtJ_G0019462.1 mouse_genomes_project 12 11323681 11352224 - MGP_NODShiLtJ_P0034232 Ddx1 protein_coding protein_coding MGP_NODShiLtJ_T0000241.1 MGP_NODShiLtJ_G0000179.1 mouse_genomes_project 12 127818003 127818300 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034812.1 MGP_NODShiLtJ_G0019678.1 mouse_genomes_project 12 80130788 80225916 - MGP_NODShiLtJ_P0034812 Ccdc175 protein_coding protein_coding MGP_NODShiLtJ_T0098752.1 MGP_NODShiLtJ_G0037146.1 mouse_genomes_project 12 56507077 56507184 + Gm24859 snRNA snRNA MGP_NODShiLtJ_T0034411.1 MGP_NODShiLtJ_G0019526.1 mouse_genomes_project 12 31475937 31504417 - MGP_NODShiLtJ_P0034411 Hbp1 protein_coding protein_coding MGP_NODShiLtJ_T0034412.1 MGP_NODShiLtJ_G0019526.1 mouse_genomes_project 12 31479065 31504105 - MGP_NODShiLtJ_P0034412 Hbp1 protein_coding protein_coding MGP_NODShiLtJ_T0034413.1 MGP_NODShiLtJ_G0019526.1 mouse_genomes_project 12 31480495 31492942 - MGP_NODShiLtJ_P0034413 Hbp1 protein_coding protein_coding MGP_NODShiLtJ_T0034414.1 MGP_NODShiLtJ_G0019526.1 mouse_genomes_project 12 31480606 31484486 - Hbp1 protein_coding retained_intron MGP_NODShiLtJ_T0034415.1 MGP_NODShiLtJ_G0019526.1 mouse_genomes_project 12 31482515 31502574 - MGP_NODShiLtJ_P0034415 Hbp1 protein_coding protein_coding MGP_NODShiLtJ_T0034416.1 MGP_NODShiLtJ_G0019526.1 mouse_genomes_project 12 31484024 31504052 - MGP_NODShiLtJ_P0034416 Hbp1 protein_coding protein_coding MGP_NODShiLtJ_T0034417.1 MGP_NODShiLtJ_G0019526.1 mouse_genomes_project 12 31486141 31504103 - MGP_NODShiLtJ_P0034417 Hbp1 protein_coding protein_coding MGP_NODShiLtJ_T0034418.1 MGP_NODShiLtJ_G0019526.1 mouse_genomes_project 12 31486727 31504092 - MGP_NODShiLtJ_P0034418 Hbp1 protein_coding protein_coding MGP_NODShiLtJ_T0000847.1 MGP_NODShiLtJ_G0000777.1 mouse_genomes_project 12 114934564 114936694 - TEC TEC MGP_NODShiLtJ_T0035023.1 MGP_NODShiLtJ_G0019757.1 mouse_genomes_project 12 90633045 90669333 - MGP_NODShiLtJ_P0035023 Synj2bp protein_coding protein_coding MGP_NODShiLtJ_T0035024.1 MGP_NODShiLtJ_G0019757.1 mouse_genomes_project 12 90636271 90639258 - Synj2bp protein_coding retained_intron MGP_NODShiLtJ_T0035025.1 MGP_NODShiLtJ_G0019757.1 mouse_genomes_project 12 90638416 90645576 - MGP_NODShiLtJ_P0035025 Synj2bp protein_coding protein_coding MGP_NODShiLtJ_T0035026.1 MGP_NODShiLtJ_G0019757.1 mouse_genomes_project 12 90638546 90669302 - MGP_NODShiLtJ_P0035026 Synj2bp protein_coding protein_coding MGP_NODShiLtJ_T0098744.1 MGP_NODShiLtJ_G0037138.1 mouse_genomes_project 12 11629184 11629291 - Gm24142 snRNA snRNA MGP_NODShiLtJ_T0034958.1 MGP_NODShiLtJ_G0019735.1 mouse_genomes_project 12 88035001 88053043 - MGP_NODShiLtJ_P0034958 Rdh11 protein_coding protein_coding MGP_NODShiLtJ_T0034959.1 MGP_NODShiLtJ_G0019735.1 mouse_genomes_project 12 88036215 88051711 - MGP_NODShiLtJ_P0034959 Rdh11 protein_coding protein_coding MGP_NODShiLtJ_T0034960.1 MGP_NODShiLtJ_G0019735.1 mouse_genomes_project 12 88036829 88052543 - MGP_NODShiLtJ_P0034960 Rdh11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035331.1 MGP_NODShiLtJ_G0019844.1 mouse_genomes_project 12 97328781 97336569 + MGP_NODShiLtJ_P0035331 Gm10436 protein_coding protein_coding MGP_NODShiLtJ_T0003352.1 MGP_NODShiLtJ_G0003074.1 mouse_genomes_project 12 82505757 82517990 - Gm29587 antisense antisense MGP_NODShiLtJ_T0006325.1 MGP_NODShiLtJ_G0005269.1 mouse_genomes_project 12 6360509 6366846 - Gm4755 lincRNA lincRNA MGP_NODShiLtJ_T0000108.1 MGP_NODShiLtJ_G0000082.1 mouse_genomes_project 12 128692913 128693378 - MGP_NODShiLtJ_P0000108 Ighv10-3 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0097753.1 MGP_NODShiLtJ_G0036165.1 mouse_genomes_project 12 93511088 93511699 - pseudogene pseudogene MGP_NODShiLtJ_T0000076.1 MGP_NODShiLtJ_G0000060.1 mouse_genomes_project 12 127991635 127992065 - MGP_NODShiLtJ_P0000076 Ighv14-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035141.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93802891 93818752 + MGP_NODShiLtJ_P0035141 Coq6 protein_coding protein_coding MGP_NODShiLtJ_T0035142.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93803202 93818756 + MGP_NODShiLtJ_P0035142 Coq6 protein_coding protein_coding MGP_NODShiLtJ_T0035143.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93803230 93818756 + Coq6 protein_coding retained_intron MGP_NODShiLtJ_T0035144.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93803264 93818752 + MGP_NODShiLtJ_P0035144 Coq6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035145.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93803273 93818752 + MGP_NODShiLtJ_P0035145 Coq6 protein_coding protein_coding MGP_NODShiLtJ_T0035146.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93803275 93812064 + Coq6 protein_coding processed_transcript MGP_NODShiLtJ_T0035147.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93803277 93818748 + Coq6 protein_coding retained_intron MGP_NODShiLtJ_T0035148.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93803298 93815991 + MGP_NODShiLtJ_P0035148 Coq6 protein_coding protein_coding MGP_NODShiLtJ_T0035149.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93813385 93817203 + Coq6 protein_coding processed_transcript MGP_NODShiLtJ_T0035150.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93813385 93818752 + Coq6 protein_coding processed_transcript MGP_NODShiLtJ_T0035151.1 MGP_NODShiLtJ_G0019788.1 mouse_genomes_project 12 93815961 93817125 + Coq6 protein_coding retained_intron MGP_NODShiLtJ_T0100028.1 MGP_NODShiLtJ_G0038422.1 mouse_genomes_project 12 123004480 123004552 + Gm25357 snoRNA snoRNA MGP_NODShiLtJ_T0000259.1 MGP_NODShiLtJ_G0000197.1 mouse_genomes_project 12 128847602 128848087 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000834.1 MGP_NODShiLtJ_G0000764.1 mouse_genomes_project 12 10645189 10645719 + TEC TEC MGP_NODShiLtJ_T0006322.1 MGP_NODShiLtJ_G0005267.1 mouse_genomes_project 12 2438091 2483669 + 2810032G03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006323.1 MGP_NODShiLtJ_G0005267.1 mouse_genomes_project 12 2479006 2483995 + 2810032G03Rik lincRNA lincRNA MGP_NODShiLtJ_T0034561.1 MGP_NODShiLtJ_G0019580.1 mouse_genomes_project 12 55466100 55538085 + MGP_NODShiLtJ_P0034561 Ap4s1 protein_coding protein_coding MGP_NODShiLtJ_T0034280.1 MGP_NODShiLtJ_G0019477.1 mouse_genomes_project 12 15957006 16038060 + MGP_NODShiLtJ_P0034280 Nol10 protein_coding protein_coding MGP_NODShiLtJ_T0034281.1 MGP_NODShiLtJ_G0019477.1 mouse_genomes_project 12 15957024 16047484 + MGP_NODShiLtJ_P0034281 Nol10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034874.1 MGP_NODShiLtJ_G0019704.1 mouse_genomes_project 12 84082023 84122487 - MGP_NODShiLtJ_P0034874 Wdr89 protein_coding protein_coding MGP_NODShiLtJ_T0034875.1 MGP_NODShiLtJ_G0019704.1 mouse_genomes_project 12 84082804 84122477 - MGP_NODShiLtJ_P0034875 Wdr89 protein_coding protein_coding MGP_NODShiLtJ_T0099972.1 MGP_NODShiLtJ_G0038366.1 mouse_genomes_project 12 7334548 7334676 - Gm23979 snoRNA snoRNA MGP_NODShiLtJ_T0034684.1 MGP_NODShiLtJ_G0019629.1 mouse_genomes_project 12 71153867 71157469 - MGP_NODShiLtJ_P0034684 Fscb protein_coding protein_coding MGP_NODShiLtJ_T0035123.1 MGP_NODShiLtJ_G0019784.1 mouse_genomes_project 12 93576906 93648191 - MGP_NODShiLtJ_P0035123 Elmsan1 protein_coding protein_coding MGP_NODShiLtJ_T0035124.1 MGP_NODShiLtJ_G0019784.1 mouse_genomes_project 12 93577008 93621643 - MGP_NODShiLtJ_P0035124 Elmsan1 protein_coding protein_coding MGP_NODShiLtJ_T0035125.1 MGP_NODShiLtJ_G0019784.1 mouse_genomes_project 12 93580668 93582867 - Elmsan1 protein_coding processed_transcript MGP_NODShiLtJ_T0035126.1 MGP_NODShiLtJ_G0019784.1 mouse_genomes_project 12 93584162 93587774 - Elmsan1 protein_coding processed_transcript MGP_NODShiLtJ_T0006401.1 MGP_NODShiLtJ_G0005330.1 mouse_genomes_project 12 120285506 120299301 - Gm16084 lincRNA lincRNA MGP_NODShiLtJ_T0034152.1 MGP_NODShiLtJ_G0019428.1 mouse_genomes_project 12 1756918 1779597 - MGP_NODShiLtJ_P0034152 Fam228b protein_coding protein_coding MGP_NODShiLtJ_T0099991.1 MGP_NODShiLtJ_G0038385.1 mouse_genomes_project 12 48194309 48194516 + Gm24948 snoRNA snoRNA MGP_NODShiLtJ_T0009697.1 MGP_NODShiLtJ_G0007830.1 mouse_genomes_project 12 32706415 32706575 + Gm22904 miRNA miRNA MGP_NODShiLtJ_T0012741.1 MGP_NODShiLtJ_G0010849.1 mouse_genomes_project 12 128360285 128360927 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006377.1 MGP_NODShiLtJ_G0005310.1 mouse_genomes_project 12 97131970 97132103 - Gm29362 lincRNA lincRNA MGP_NODShiLtJ_T0000111.1 MGP_NODShiLtJ_G0000085.1 mouse_genomes_project 12 128747551 128747986 - MGP_NODShiLtJ_P0000111 Ighv15-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000112.1 MGP_NODShiLtJ_G0000085.1 mouse_genomes_project 12 128747551 128747986 - MGP_NODShiLtJ_P0000112 Ighv15-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0017179.1 MGP_NODShiLtJ_G0015103.1 mouse_genomes_project 12 90668460 90669780 - Gm17191 processed_transcript processed_transcript MGP_NODShiLtJ_T0035611.1 MGP_NODShiLtJ_G0019942.1 mouse_genomes_project 12 118599973 118678393 - MGP_NODShiLtJ_P0035611 Atg2b protein_coding protein_coding MGP_NODShiLtJ_T0035612.1 MGP_NODShiLtJ_G0019942.1 mouse_genomes_project 12 118599978 118677982 - MGP_NODShiLtJ_P0035612 Atg2b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034282.1 MGP_NODShiLtJ_G0019478.1 mouse_genomes_project 12 16175594 16182718 + MGP_NODShiLtJ_P0034282 Odc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098768.1 MGP_NODShiLtJ_G0037162.1 mouse_genomes_project 12 76985093 76985197 - Gm24499 snRNA snRNA MGP_NODShiLtJ_T0034156.1 MGP_NODShiLtJ_G0019431.1 mouse_genomes_project 12 1846283 1854704 - MGP_NODShiLtJ_P0034156 Fkbp1b protein_coding protein_coding MGP_NODShiLtJ_T0034529.1 MGP_NODShiLtJ_G0019566.1 mouse_genomes_project 12 46198258 46202650 - MGP_NODShiLtJ_P0034529 Dnajb9 protein_coding protein_coding MGP_NODShiLtJ_T0035032.1 MGP_NODShiLtJ_G0019761.1 mouse_genomes_project 12 90857175 90927794 - MGP_NODShiLtJ_P0035032 Map3k9 protein_coding protein_coding MGP_NODShiLtJ_T0035033.1 MGP_NODShiLtJ_G0019761.1 mouse_genomes_project 12 90859557 90927498 - MGP_NODShiLtJ_P0035033 Map3k9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098760.1 MGP_NODShiLtJ_G0037154.1 mouse_genomes_project 12 59126582 59126688 + Gm24296 snRNA snRNA MGP_NODShiLtJ_T0035039.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91867672 92354399 + MGP_NODShiLtJ_P0035039 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035040.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91900891 92471743 + MGP_NODShiLtJ_P0035040 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035041.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901180 92401865 + MGP_NODShiLtJ_P0035041 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035042.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901200 92472012 + MGP_NODShiLtJ_P0035042 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035043.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901293 92472584 + MGP_NODShiLtJ_P0035043 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035044.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901755 92473140 + MGP_NODShiLtJ_P0035044 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035045.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901755 92475828 + MGP_NODShiLtJ_P0035045 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035046.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901828 92472118 + MGP_NODShiLtJ_P0035046 Rgs6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035047.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901843 92372827 + MGP_NODShiLtJ_P0035047 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035048.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901891 92358177 + MGP_NODShiLtJ_P0035048 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035049.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91901910 92471865 + MGP_NODShiLtJ_P0035049 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035050.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91902105 92358115 + MGP_NODShiLtJ_P0035050 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035051.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91902281 91903262 + Rgs6 protein_coding retained_intron MGP_NODShiLtJ_T0035052.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91928765 92471743 + MGP_NODShiLtJ_P0035052 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035053.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91928765 92449886 + MGP_NODShiLtJ_P0035053 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035054.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91928765 92450009 + MGP_NODShiLtJ_P0035054 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035055.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91928765 92444902 + MGP_NODShiLtJ_P0035055 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035056.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91928765 92449886 + MGP_NODShiLtJ_P0035056 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035057.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 91928765 92471743 + MGP_NODShiLtJ_P0035057 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035058.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 92353796 92354927 + Rgs6 protein_coding retained_intron MGP_NODShiLtJ_T0035059.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 92417074 92471979 + MGP_NODShiLtJ_P0035059 Rgs6 protein_coding protein_coding MGP_NODShiLtJ_T0035060.1 MGP_NODShiLtJ_G0019765.1 mouse_genomes_project 12 92427377 92448797 + Rgs6 protein_coding retained_intron MGP_NODShiLtJ_T0009737.1 MGP_NODShiLtJ_G0007870.1 mouse_genomes_project 12 122635603 122635670 - Gm25297 miRNA miRNA MGP_NODShiLtJ_T0098748.1 MGP_NODShiLtJ_G0037142.1 mouse_genomes_project 12 32642623 32642725 - Gm24922 snRNA snRNA MGP_NODShiLtJ_T0000243.1 MGP_NODShiLtJ_G0000181.1 mouse_genomes_project 12 128016617 128017080 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034522.1 MGP_NODShiLtJ_G0019563.1 mouse_genomes_project 12 41531569 41969638 + MGP_NODShiLtJ_P0034522 Dock4 protein_coding protein_coding MGP_NODShiLtJ_T0000036.1 MGP_NODShiLtJ_G0000029.1 mouse_genomes_project 12 127191608 127191661 - MGP_NODShiLtJ_P0000036 Ighj1 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0000065.1 MGP_NODShiLtJ_G0000052.1 mouse_genomes_project 12 127745122 127745598 - MGP_NODShiLtJ_P0000065 Ighv5-15 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000066.1 MGP_NODShiLtJ_G0000052.1 mouse_genomes_project 12 127745122 127745606 - MGP_NODShiLtJ_P0000066 Ighv5-15 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0009757.1 MGP_NODShiLtJ_G0007890.1 mouse_genomes_project 12 122962810 122962893 + Gm23912 miRNA miRNA MGP_NODShiLtJ_T0035122.1 MGP_NODShiLtJ_G0019783.1 mouse_genomes_project 12 93573859 93576218 - MGP_NODShiLtJ_P0035122 Pnma1 protein_coding protein_coding MGP_NODShiLtJ_T0034961.1 MGP_NODShiLtJ_G0019736.1 mouse_genomes_project 12 88074492 88088066 + MGP_NODShiLtJ_P0034961 Rdh12 protein_coding protein_coding MGP_NODShiLtJ_T0034962.1 MGP_NODShiLtJ_G0019736.1 mouse_genomes_project 12 88074509 88088065 + MGP_NODShiLtJ_P0034962 Rdh12 protein_coding protein_coding MGP_NODShiLtJ_T0034963.1 MGP_NODShiLtJ_G0019736.1 mouse_genomes_project 12 88074525 88088065 + Rdh12 protein_coding retained_intron MGP_NODShiLtJ_T0034964.1 MGP_NODShiLtJ_G0019736.1 mouse_genomes_project 12 88076240 88078314 + MGP_NODShiLtJ_P0034964 Rdh12 protein_coding protein_coding MGP_NODShiLtJ_T0009741.1 MGP_NODShiLtJ_G0007874.1 mouse_genomes_project 12 122921864 122921947 + Mir493 miRNA miRNA MGP_NODShiLtJ_T0000265.1 MGP_NODShiLtJ_G0000203.1 mouse_genomes_project 12 129422079 129422507 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035127.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716675 93748585 + MGP_NODShiLtJ_P0035127 Ptgr2 protein_coding protein_coding MGP_NODShiLtJ_T0035128.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716808 93735934 + Ptgr2 protein_coding retained_intron MGP_NODShiLtJ_T0035129.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716817 93741727 + MGP_NODShiLtJ_P0035129 Ptgr2 protein_coding protein_coding MGP_NODShiLtJ_T0035130.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716824 93730277 + Ptgr2 protein_coding retained_intron MGP_NODShiLtJ_T0035131.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716827 93740343 + Ptgr2 protein_coding processed_transcript MGP_NODShiLtJ_T0035132.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716842 93737990 + Ptgr2 protein_coding processed_transcript MGP_NODShiLtJ_T0035133.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716843 93746855 + MGP_NODShiLtJ_P0035133 Ptgr2 protein_coding protein_coding MGP_NODShiLtJ_T0035134.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716849 93747607 + MGP_NODShiLtJ_P0035134 Ptgr2 protein_coding protein_coding MGP_NODShiLtJ_T0035135.1 MGP_NODShiLtJ_G0019785.1 mouse_genomes_project 12 93716856 93746855 + MGP_NODShiLtJ_P0035135 Ptgr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006327.1 MGP_NODShiLtJ_G0005271.1 mouse_genomes_project 12 7262340 7267801 - 1700022H16Rik lincRNA lincRNA MGP_NODShiLtJ_T0017169.1 MGP_NODShiLtJ_G0015098.1 mouse_genomes_project 12 32762343 32799309 - F730043M19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017170.1 MGP_NODShiLtJ_G0015098.1 mouse_genomes_project 12 32777853 32798632 - F730043M19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017171.1 MGP_NODShiLtJ_G0015098.1 mouse_genomes_project 12 32784865 32799309 - F730043M19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017172.1 MGP_NODShiLtJ_G0015098.1 mouse_genomes_project 12 32786390 32799320 - F730043M19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017173.1 MGP_NODShiLtJ_G0015098.1 mouse_genomes_project 12 32787124 32791329 - F730043M19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017174.1 MGP_NODShiLtJ_G0015098.1 mouse_genomes_project 12 32798867 32799319 - F730043M19Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0035207.1 MGP_NODShiLtJ_G0019807.1 mouse_genomes_project 12 94637360 94653034 - MGP_NODShiLtJ_P0035207 Rps6kl1 protein_coding protein_coding MGP_NODShiLtJ_T0034941.1 MGP_NODShiLtJ_G0019724.1 mouse_genomes_project 12 86895150 87497099 + MGP_NODShiLtJ_P0034941 protein_coding protein_coding MGP_NODShiLtJ_T0034942.1 MGP_NODShiLtJ_G0019724.1 mouse_genomes_project 12 86895150 87497099 + MGP_NODShiLtJ_P0034942 protein_coding protein_coding MGP_NODShiLtJ_T0009713.1 MGP_NODShiLtJ_G0007846.1 mouse_genomes_project 12 80162657 80162766 - Gm24466 miRNA miRNA MGP_NODShiLtJ_T0017210.1 MGP_NODShiLtJ_G0015113.1 mouse_genomes_project 12 130891412 130926880 - Gm20658 processed_transcript processed_transcript MGP_NODShiLtJ_T0017211.1 MGP_NODShiLtJ_G0015113.1 mouse_genomes_project 12 130891435 130927007 - Gm20658 processed_transcript processed_transcript MGP_NODShiLtJ_T0003374.1 MGP_NODShiLtJ_G0003094.1 mouse_genomes_project 12 132091067 132193352 - Gm5441 antisense antisense MGP_NODShiLtJ_T0003375.1 MGP_NODShiLtJ_G0003094.1 mouse_genomes_project 12 132135966 132193362 - Gm5441 antisense antisense MGP_NODShiLtJ_T0034936.1 MGP_NODShiLtJ_G0019722.1 mouse_genomes_project 12 85494499 85519454 - MGP_NODShiLtJ_P0034936 Max protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034937.1 MGP_NODShiLtJ_G0019722.1 mouse_genomes_project 12 85494502 85519492 - MGP_NODShiLtJ_P0034937 Max protein_coding protein_coding MGP_NODShiLtJ_T0034938.1 MGP_NODShiLtJ_G0019722.1 mouse_genomes_project 12 85494502 85519492 - MGP_NODShiLtJ_P0034938 Max protein_coding protein_coding MGP_NODShiLtJ_T0098784.1 MGP_NODShiLtJ_G0037178.1 mouse_genomes_project 12 113453877 113453971 - Gm22749 snRNA snRNA MGP_NODShiLtJ_T0012729.1 MGP_NODShiLtJ_G0010837.1 mouse_genomes_project 12 119595910 119597579 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006436.1 MGP_NODShiLtJ_G0005343.1 mouse_genomes_project 12 124794251 124796844 + A230087F16Rik lincRNA lincRNA MGP_NODShiLtJ_T0006437.1 MGP_NODShiLtJ_G0005343.1 mouse_genomes_project 12 124794273 124803346 + A230087F16Rik lincRNA lincRNA MGP_NODShiLtJ_T0011229.1 MGP_NODShiLtJ_G0009362.1 mouse_genomes_project 12 122874458 122874541 + Gm27596 misc_RNA misc_RNA MGP_NODShiLtJ_T0009749.1 MGP_NODShiLtJ_G0007882.1 mouse_genomes_project 12 122935592 122935716 + Mir433 miRNA miRNA MGP_NODShiLtJ_T0000013.1 MGP_NODShiLtJ_G0000009.1 mouse_genomes_project 12 127179048 127183221 - MGP_NODShiLtJ_P0000013 Ighm IG_C_gene IG_C_gene MGP_NODShiLtJ_T0000014.1 MGP_NODShiLtJ_G0000009.1 mouse_genomes_project 12 127181231 127183221 - MGP_NODShiLtJ_P0000014 Ighm IG_C_gene IG_C_gene MGP_NODShiLtJ_T0035881.1 MGP_NODShiLtJ_G0000009.1 mouse_genomes_project 12 127179046 127183147 - MGP_NODShiLtJ_P0035881 Ighm IG_C_gene unknown_likely_coding MGP_NODShiLtJ_T0098757.1 MGP_NODShiLtJ_G0037151.1 mouse_genomes_project 12 58820077 58820241 + Gm25679 snRNA snRNA MGP_NODShiLtJ_T0006381.1 MGP_NODShiLtJ_G0005314.1 mouse_genomes_project 12 111606070 111666470 + Gm26839 lincRNA lincRNA MGP_NODShiLtJ_T0035764.1 MGP_NODShiLtJ_G0019987.1 mouse_genomes_project 12 125221107 125224901 - MGP_NODShiLtJ_P0035764 Ckb protein_coding protein_coding MGP_NODShiLtJ_T0009809.1 MGP_NODShiLtJ_G0007942.1 mouse_genomes_project 12 126306627 126306702 - Mir6939 miRNA miRNA MGP_NODShiLtJ_T0012681.1 MGP_NODShiLtJ_G0010789.1 mouse_genomes_project 12 46949656 46950755 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099980.1 MGP_NODShiLtJ_G0038374.1 mouse_genomes_project 12 27604593 27604725 + Gm25564 snoRNA snoRNA MGP_NODShiLtJ_T0012680.1 MGP_NODShiLtJ_G0010788.1 mouse_genomes_project 12 36119764 36119920 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011213.1 MGP_NODShiLtJ_G0009346.1 mouse_genomes_project 12 34927790 34928031 - Gm24359 misc_RNA misc_RNA MGP_NODShiLtJ_T0006382.1 MGP_NODShiLtJ_G0005315.1 mouse_genomes_project 12 111673564 111675486 - 1700064M15Rik lincRNA lincRNA MGP_NODShiLtJ_T0034997.1 MGP_NODShiLtJ_G0019750.1 mouse_genomes_project 12 90005826 90023871 - MGP_NODShiLtJ_P0034997 Slc10a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034653.1 MGP_NODShiLtJ_G0019623.1 mouse_genomes_project 12 63782110 63789202 + MGP_NODShiLtJ_P0034653 Pnn protein_coding protein_coding MGP_NODShiLtJ_T0035878.1 MGP_NODShiLtJ_G0020025.1 mouse_genomes_project 12 126882820 126886414 + MGP_NODShiLtJ_P0035878 Tmem121 protein_coding protein_coding MGP_NODShiLtJ_T0009778.1 MGP_NODShiLtJ_G0007911.1 mouse_genomes_project 12 123074188 123074272 + Mir654 miRNA miRNA MGP_NODShiLtJ_T0034507.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41287847 41311836 - MGP_NODShiLtJ_P0034507 Ifrd1 protein_coding protein_coding MGP_NODShiLtJ_T0034508.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41289411 41295086 - MGP_NODShiLtJ_P0034508 Ifrd1 protein_coding protein_coding MGP_NODShiLtJ_T0034509.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41289600 41290923 - Ifrd1 protein_coding retained_intron MGP_NODShiLtJ_T0034510.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41290199 41311609 - MGP_NODShiLtJ_P0034510 Ifrd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034511.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41302003 41338677 - MGP_NODShiLtJ_P0034511 Ifrd1 protein_coding protein_coding MGP_NODShiLtJ_T0034512.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41302060 41305537 - MGP_NODShiLtJ_P0034512 Ifrd1 protein_coding protein_coding MGP_NODShiLtJ_T0034513.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41302117 41339084 - MGP_NODShiLtJ_P0034513 Ifrd1 protein_coding protein_coding MGP_NODShiLtJ_T0034514.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41303385 41311832 - Ifrd1 protein_coding retained_intron MGP_NODShiLtJ_T0034515.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41304212 41339102 - MGP_NODShiLtJ_P0034515 Ifrd1 protein_coding protein_coding MGP_NODShiLtJ_T0034516.1 MGP_NODShiLtJ_G0019560.1 mouse_genomes_project 12 41305181 41311796 - MGP_NODShiLtJ_P0034516 Ifrd1 protein_coding protein_coding MGP_NODShiLtJ_T0000836.1 MGP_NODShiLtJ_G0000766.1 mouse_genomes_project 12 49821087 49821553 + TEC TEC MGP_NODShiLtJ_T0034754.1 MGP_NODShiLtJ_G0019659.1 mouse_genomes_project 12 77882538 77888834 + MGP_NODShiLtJ_P0034754 Gm3086 protein_coding protein_coding MGP_NODShiLtJ_T0000011.1 MGP_NODShiLtJ_G0000008.1 mouse_genomes_project 12 127166444 127176865 - MGP_NODShiLtJ_P0000011 Ighd IG_C_gene IG_C_gene MGP_NODShiLtJ_T0000012.1 MGP_NODShiLtJ_G0000008.1 mouse_genomes_project 12 127169392 127176865 - MGP_NODShiLtJ_P0000012 Ighd IG_C_gene IG_C_gene MGP_NODShiLtJ_T0035879.1 MGP_NODShiLtJ_G0000008.1 mouse_genomes_project 12 127167375 127176845 - MGP_NODShiLtJ_P0035879 Ighd IG_C_gene unknown_likely_coding MGP_NODShiLtJ_T0035880.1 MGP_NODShiLtJ_G0000008.1 mouse_genomes_project 12 127167375 127176704 - MGP_NODShiLtJ_P0035880 Ighd IG_C_gene unknown_likely_coding MGP_NODShiLtJ_T0009770.1 MGP_NODShiLtJ_G0007903.1 mouse_genomes_project 12 123066368 123066453 + Mir494 miRNA miRNA MGP_NODShiLtJ_T0100038.1 MGP_NODShiLtJ_G0038432.1 mouse_genomes_project 12 123037384 123037455 + Gm22205 snoRNA snoRNA MGP_NODShiLtJ_T0034777.1 MGP_NODShiLtJ_G0019666.1 mouse_genomes_project 12 78805197 78885039 + MGP_NODShiLtJ_P0034777 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0011232.1 MGP_NODShiLtJ_G0009365.1 mouse_genomes_project 12 133737860 133738059 + Gm22537 misc_RNA misc_RNA MGP_NODShiLtJ_T0035400.1 MGP_NODShiLtJ_G0019864.1 mouse_genomes_project 12 110637402 110698041 - MGP_NODShiLtJ_P0035400 Ptpn21 protein_coding protein_coding MGP_NODShiLtJ_T0035401.1 MGP_NODShiLtJ_G0019864.1 mouse_genomes_project 12 110637402 110700801 - MGP_NODShiLtJ_P0035401 Ptpn21 protein_coding protein_coding MGP_NODShiLtJ_T0006331.1 MGP_NODShiLtJ_G0005275.1 mouse_genomes_project 12 14320042 14402116 + Gm5432 lincRNA lincRNA MGP_NODShiLtJ_T0009731.1 MGP_NODShiLtJ_G0007864.1 mouse_genomes_project 12 117858737 117858802 - Mir3069 miRNA miRNA MGP_NODShiLtJ_T0034584.1 MGP_NODShiLtJ_G0019594.1 mouse_genomes_project 12 59017268 59114809 - MGP_NODShiLtJ_P0034584 Baz1a protein_coding protein_coding MGP_NODShiLtJ_T0034585.1 MGP_NODShiLtJ_G0019594.1 mouse_genomes_project 12 59017830 59114980 - MGP_NODShiLtJ_P0034585 Baz1a protein_coding protein_coding MGP_NODShiLtJ_T0034586.1 MGP_NODShiLtJ_G0019594.1 mouse_genomes_project 12 59018448 59019430 - Baz1a protein_coding retained_intron MGP_NODShiLtJ_T0034587.1 MGP_NODShiLtJ_G0019594.1 mouse_genomes_project 12 59048525 59055794 - MGP_NODShiLtJ_P0034587 Baz1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034588.1 MGP_NODShiLtJ_G0019594.1 mouse_genomes_project 12 59065975 59070226 - MGP_NODShiLtJ_P0034588 Baz1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034589.1 MGP_NODShiLtJ_G0019594.1 mouse_genomes_project 12 59081020 59148943 - MGP_NODShiLtJ_P0034589 Baz1a protein_coding protein_coding MGP_NODShiLtJ_T0034590.1 MGP_NODShiLtJ_G0019594.1 mouse_genomes_project 12 59103478 59114409 - MGP_NODShiLtJ_P0034590 Baz1a protein_coding protein_coding MGP_NODShiLtJ_T0034591.1 MGP_NODShiLtJ_G0019594.1 mouse_genomes_project 12 59103493 59128682 - MGP_NODShiLtJ_P0034591 Baz1a protein_coding protein_coding MGP_NODShiLtJ_T0097906.1 MGP_NODShiLtJ_G0036318.1 mouse_genomes_project 12 10133175 10133306 + Gm26171 rRNA rRNA MGP_NODShiLtJ_T0098739.1 MGP_NODShiLtJ_G0037133.1 mouse_genomes_project 12 1760458 1760563 + Gm23676 snRNA snRNA MGP_NODShiLtJ_T0034616.1 MGP_NODShiLtJ_G0019609.1 mouse_genomes_project 12 60650405 60671147 - MGP_NODShiLtJ_P0034616 Mbip protein_coding protein_coding MGP_NODShiLtJ_T0035402.1 MGP_NODShiLtJ_G0019865.1 mouse_genomes_project 12 110710330 110753655 + MGP_NODShiLtJ_P0035402 Zc3h14 protein_coding protein_coding MGP_NODShiLtJ_T0035403.1 MGP_NODShiLtJ_G0019865.1 mouse_genomes_project 12 110710330 110753655 + MGP_NODShiLtJ_P0035403 Zc3h14 protein_coding protein_coding MGP_NODShiLtJ_T0035404.1 MGP_NODShiLtJ_G0019865.1 mouse_genomes_project 12 110710330 110753655 + MGP_NODShiLtJ_P0035404 Zc3h14 protein_coding protein_coding MGP_NODShiLtJ_T0035405.1 MGP_NODShiLtJ_G0019865.1 mouse_genomes_project 12 110734375 110753655 + MGP_NODShiLtJ_P0035405 Zc3h14 protein_coding protein_coding MGP_NODShiLtJ_T0034178.1 MGP_NODShiLtJ_G0019439.1 mouse_genomes_project 12 5823633 5827654 - MGP_NODShiLtJ_P0034178 Gdf7 protein_coding protein_coding MGP_NODShiLtJ_T0034126.1 MGP_NODShiLtJ_G0019416.1 mouse_genomes_project 12 846334 846731 + MGP_NODShiLtJ_P0034126 Gm17728 protein_coding protein_coding MGP_NODShiLtJ_T0097908.1 MGP_NODShiLtJ_G0036320.1 mouse_genomes_project 12 24737276 24737382 + Gm22527 rRNA rRNA MGP_NODShiLtJ_T0009734.1 MGP_NODShiLtJ_G0007867.1 mouse_genomes_project 12 121985228 121985305 - Gm23872 miRNA miRNA MGP_NODShiLtJ_T0003364.1 MGP_NODShiLtJ_G0003086.1 mouse_genomes_project 12 101895272 101904189 + Gm16876 antisense antisense MGP_NODShiLtJ_T0000082.1 MGP_NODShiLtJ_G0000065.1 mouse_genomes_project 12 128284138 128284434 - MGP_NODShiLtJ_P0000082 Ighv3-3 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000083.1 MGP_NODShiLtJ_G0000065.1 mouse_genomes_project 12 128284138 128284575 - MGP_NODShiLtJ_P0000083 Ighv3-3 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035497.1 MGP_NODShiLtJ_G0019893.1 mouse_genomes_project 12 115098825 115100257 - MGP_NODShiLtJ_P0035497 Moap1 protein_coding protein_coding MGP_NODShiLtJ_T0035498.1 MGP_NODShiLtJ_G0019893.1 mouse_genomes_project 12 115098825 115100241 - MGP_NODShiLtJ_P0035498 Moap1 protein_coding protein_coding MGP_NODShiLtJ_T0012727.1 MGP_NODShiLtJ_G0010835.1 mouse_genomes_project 12 116864927 116866014 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012712.1 MGP_NODShiLtJ_G0010820.1 mouse_genomes_project 12 93689813 93690455 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098745.1 MGP_NODShiLtJ_G0037139.1 mouse_genomes_project 12 11646537 11646643 - Gm22170 snRNA snRNA MGP_NODShiLtJ_T0034922.1 MGP_NODShiLtJ_G0019720.1 mouse_genomes_project 12 85346489 85349709 - MGP_NODShiLtJ_P0034922 protein_coding protein_coding MGP_NODShiLtJ_T0000246.1 MGP_NODShiLtJ_G0000184.1 mouse_genomes_project 12 128234829 128235105 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035796.1 MGP_NODShiLtJ_G0019995.1 mouse_genomes_project 12 125546648 125552250 - MGP_NODShiLtJ_P0035796 2010107E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0009722.1 MGP_NODShiLtJ_G0007855.1 mouse_genomes_project 12 96682512 96682614 + Gm25847 miRNA miRNA MGP_NODShiLtJ_T0035743.1 MGP_NODShiLtJ_G0019980.1 mouse_genomes_project 12 124802329 124890271 - MGP_NODShiLtJ_P0035743 Cdc42bpb protein_coding protein_coding MGP_NODShiLtJ_T0034294.1 MGP_NODShiLtJ_G0019483.1 mouse_genomes_project 12 20126761 20133973 + MGP_NODShiLtJ_P0034294 Iah1 protein_coding protein_coding MGP_NODShiLtJ_T0035649.1 MGP_NODShiLtJ_G0019951.1 mouse_genomes_project 12 121419555 121504365 - MGP_NODShiLtJ_P0035649 Ccdc85c protein_coding protein_coding MGP_NODShiLtJ_T0034138.1 MGP_NODShiLtJ_G0019421.1 mouse_genomes_project 12 1147699 1168647 - MGP_NODShiLtJ_P0034138 Cenpo protein_coding protein_coding MGP_NODShiLtJ_T0034139.1 MGP_NODShiLtJ_G0019421.1 mouse_genomes_project 12 1149517 1185220 - MGP_NODShiLtJ_P0034139 Cenpo protein_coding protein_coding MGP_NODShiLtJ_T0034141.1 MGP_NODShiLtJ_G0019421.1 mouse_genomes_project 12 1165582 1168607 - Cenpo protein_coding retained_intron MGP_NODShiLtJ_T0034142.1 MGP_NODShiLtJ_G0019421.1 mouse_genomes_project 12 1165651 1185199 - MGP_NODShiLtJ_P0034142 Cenpo protein_coding protein_coding MGP_NODShiLtJ_T0034143.1 MGP_NODShiLtJ_G0019421.1 mouse_genomes_project 12 1167458 1183262 - MGP_NODShiLtJ_P0034143 Cenpo protein_coding protein_coding MGP_NODShiLtJ_T0034144.1 MGP_NODShiLtJ_G0019421.1 mouse_genomes_project 12 1167792 1185193 - Cenpo protein_coding retained_intron MGP_NODShiLtJ_T0035736.1 MGP_NODShiLtJ_G0019977.1 mouse_genomes_project 12 124664999 124689925 - MGP_NODShiLtJ_P0035736 4930595D18Rik protein_coding protein_coding MGP_NODShiLtJ_T0035001.1 MGP_NODShiLtJ_G0019752.1 mouse_genomes_project 12 90282919 90423109 - MGP_NODShiLtJ_P0035001 Slc8a3 protein_coding protein_coding MGP_NODShiLtJ_T0035002.1 MGP_NODShiLtJ_G0019752.1 mouse_genomes_project 12 90283286 90422904 - MGP_NODShiLtJ_P0035002 Slc8a3 protein_coding protein_coding MGP_NODShiLtJ_T0035003.1 MGP_NODShiLtJ_G0019752.1 mouse_genomes_project 12 90284456 90423125 - MGP_NODShiLtJ_P0035003 Slc8a3 protein_coding protein_coding MGP_NODShiLtJ_T0035004.1 MGP_NODShiLtJ_G0019752.1 mouse_genomes_project 12 90287407 90384129 - MGP_NODShiLtJ_P0035004 Slc8a3 protein_coding protein_coding MGP_NODShiLtJ_T0035005.1 MGP_NODShiLtJ_G0019752.1 mouse_genomes_project 12 90299035 90423125 - Slc8a3 protein_coding retained_intron MGP_NODShiLtJ_T0006380.1 MGP_NODShiLtJ_G0005313.1 mouse_genomes_project 12 111207843 111209250 + Gm28933 lincRNA lincRNA MGP_NODShiLtJ_T0003358.1 MGP_NODShiLtJ_G0003080.1 mouse_genomes_project 12 92231218 92237854 - 1700085C21Rik antisense antisense MGP_NODShiLtJ_T0009781.1 MGP_NODShiLtJ_G0007914.1 mouse_genomes_project 12 123074750 123074818 + Mir376a miRNA miRNA MGP_NODShiLtJ_T0034699.1 MGP_NODShiLtJ_G0019637.1 mouse_genomes_project 12 72051121 72054059 + MGP_NODShiLtJ_P0034699 Wdr20rt protein_coding protein_coding MGP_NODShiLtJ_T0101047.1 MGP_NODShiLtJ_G0039417.1 mouse_genomes_project 12 105995052 105996217 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0003344.1 MGP_NODShiLtJ_G0003068.1 mouse_genomes_project 12 61045786 61048845 - Gm15524 antisense antisense MGP_NODShiLtJ_T0034333.1 MGP_NODShiLtJ_G0019496.1 mouse_genomes_project 12 25526182 25539906 - MGP_NODShiLtJ_P0034333 Rsad2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034334.1 MGP_NODShiLtJ_G0019496.1 mouse_genomes_project 12 25526182 25539927 - MGP_NODShiLtJ_P0034334 Rsad2 protein_coding protein_coding MGP_NODShiLtJ_T0034335.1 MGP_NODShiLtJ_G0019496.1 mouse_genomes_project 12 25534082 25538335 - Rsad2 protein_coding processed_transcript MGP_NODShiLtJ_T0034380.1 MGP_NODShiLtJ_G0019515.1 mouse_genomes_project 12 30517841 30523670 + MGP_NODShiLtJ_P0034380 Fam110c protein_coding protein_coding MGP_NODShiLtJ_T0034556.1 MGP_NODShiLtJ_G0019577.1 mouse_genomes_project 12 55133489 55208706 + MGP_NODShiLtJ_P0034556 Scfd1 protein_coding protein_coding MGP_NODShiLtJ_T0035423.1 MGP_NODShiLtJ_G0019869.1 mouse_genomes_project 12 111778160 111947725 - MGP_NODShiLtJ_P0035423 Efcab11 protein_coding protein_coding MGP_NODShiLtJ_T0034476.1 MGP_NODShiLtJ_G0019552.1 mouse_genomes_project 12 36433819 36768612 + MGP_NODShiLtJ_P0034476 Ispd protein_coding protein_coding MGP_NODShiLtJ_T0034238.1 MGP_NODShiLtJ_G0019467.1 mouse_genomes_project 12 15089466 15148336 - MGP_NODShiLtJ_P0034238 Lpin1 protein_coding protein_coding MGP_NODShiLtJ_T0034239.1 MGP_NODShiLtJ_G0019467.1 mouse_genomes_project 12 15089466 15148336 - MGP_NODShiLtJ_P0034239 Lpin1 protein_coding protein_coding MGP_NODShiLtJ_T0035659.1 MGP_NODShiLtJ_G0019955.1 mouse_genomes_project 12 121815339 121948922 + MGP_NODShiLtJ_P0035659 Evl protein_coding protein_coding MGP_NODShiLtJ_T0035660.1 MGP_NODShiLtJ_G0019955.1 mouse_genomes_project 12 121815339 121948922 + MGP_NODShiLtJ_P0035660 Evl protein_coding protein_coding MGP_NODShiLtJ_T0035661.1 MGP_NODShiLtJ_G0019955.1 mouse_genomes_project 12 121862858 121948922 + MGP_NODShiLtJ_P0035661 Evl protein_coding protein_coding MGP_NODShiLtJ_T0035662.1 MGP_NODShiLtJ_G0019955.1 mouse_genomes_project 12 121894250 121948922 + MGP_NODShiLtJ_P0035662 Evl protein_coding protein_coding MGP_NODShiLtJ_T0034550.1 MGP_NODShiLtJ_G0019575.1 mouse_genomes_project 12 53972615 54323191 - MGP_NODShiLtJ_P0034550 Prkd1 protein_coding protein_coding MGP_NODShiLtJ_T0034433.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32799415 32901418 + MGP_NODShiLtJ_P0034433 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0034434.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32799433 32901418 + MGP_NODShiLtJ_P0034434 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0034435.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32799476 33030424 + MGP_NODShiLtJ_P0034435 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0034436.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32799485 33033524 + MGP_NODShiLtJ_P0034436 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0034437.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32799496 32981336 + MGP_NODShiLtJ_P0034437 Atxn7l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034438.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32799527 32984052 + Atxn7l1 protein_coding retained_intron MGP_NODShiLtJ_T0034439.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32954986 33024754 + MGP_NODShiLtJ_P0034439 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0034440.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32969507 33001422 + MGP_NODShiLtJ_P0034440 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0034441.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32969519 32984052 + Atxn7l1 protein_coding retained_intron MGP_NODShiLtJ_T0034442.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32969630 32981266 + MGP_NODShiLtJ_P0034442 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0034443.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32970627 33028838 + MGP_NODShiLtJ_P0034443 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0034444.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 32970635 32981407 + Atxn7l1 protein_coding retained_intron MGP_NODShiLtJ_T0034445.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 33001785 33024759 + Atxn7l1 protein_coding retained_intron MGP_NODShiLtJ_T0034446.1 MGP_NODShiLtJ_G0019533.1 mouse_genomes_project 12 33023804 33030413 + MGP_NODShiLtJ_P0034446 Atxn7l1 protein_coding protein_coding MGP_NODShiLtJ_T0009791.1 MGP_NODShiLtJ_G0007924.1 mouse_genomes_project 12 123085738 123085804 + Mir668 miRNA miRNA MGP_NODShiLtJ_T0099982.1 MGP_NODShiLtJ_G0038376.1 mouse_genomes_project 12 30725089 30725219 - Gm24613 snoRNA snoRNA MGP_NODShiLtJ_T0034998.1 MGP_NODShiLtJ_G0019751.1 mouse_genomes_project 12 90087346 90271430 + MGP_NODShiLtJ_P0034998 Smoc1 protein_coding protein_coding MGP_NODShiLtJ_T0034999.1 MGP_NODShiLtJ_G0019751.1 mouse_genomes_project 12 90087366 90271426 + MGP_NODShiLtJ_P0034999 Smoc1 protein_coding protein_coding MGP_NODShiLtJ_T0035000.1 MGP_NODShiLtJ_G0019751.1 mouse_genomes_project 12 90087366 90271426 + MGP_NODShiLtJ_P0035000 Smoc1 protein_coding protein_coding MGP_NODShiLtJ_T0034868.1 MGP_NODShiLtJ_G0019701.1 mouse_genomes_project 12 83738132 83830053 + MGP_NODShiLtJ_P0034868 Rhoj protein_coding protein_coding MGP_NODShiLtJ_T0034869.1 MGP_NODShiLtJ_G0019701.1 mouse_genomes_project 12 83738132 83833552 + MGP_NODShiLtJ_P0034869 Rhoj protein_coding protein_coding MGP_NODShiLtJ_T0034870.1 MGP_NODShiLtJ_G0019701.1 mouse_genomes_project 12 83738132 83827914 + MGP_NODShiLtJ_P0034870 Rhoj protein_coding protein_coding MGP_NODShiLtJ_T0034871.1 MGP_NODShiLtJ_G0019701.1 mouse_genomes_project 12 83738691 83832310 + MGP_NODShiLtJ_P0034871 Rhoj protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034574.1 MGP_NODShiLtJ_G0019588.1 mouse_genomes_project 12 57226288 58091876 + MGP_NODShiLtJ_P0034574 Npas3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034575.1 MGP_NODShiLtJ_G0019588.1 mouse_genomes_project 12 57226288 58091875 + MGP_NODShiLtJ_P0034575 Npas3 protein_coding protein_coding MGP_NODShiLtJ_T0035745.1 MGP_NODShiLtJ_G0019982.1 mouse_genomes_project 12 124927051 124940629 + MGP_NODShiLtJ_P0035745 Exoc3l4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009755.1 MGP_NODShiLtJ_G0007888.1 mouse_genomes_project 12 122956215 122956311 + Mir341 miRNA miRNA MGP_NODShiLtJ_T0000254.1 MGP_NODShiLtJ_G0000192.1 mouse_genomes_project 12 128653995 128654293 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034131.1 MGP_NODShiLtJ_G0019420.1 mouse_genomes_project 12 1082781 1165626 + Adcy3 protein_coding retained_intron MGP_NODShiLtJ_T0034132.1 MGP_NODShiLtJ_G0019420.1 mouse_genomes_project 12 1082782 1165626 + MGP_NODShiLtJ_P0034132 Adcy3 protein_coding protein_coding MGP_NODShiLtJ_T0034133.1 MGP_NODShiLtJ_G0019420.1 mouse_genomes_project 12 1083075 1165626 + MGP_NODShiLtJ_P0034133 Adcy3 protein_coding protein_coding MGP_NODShiLtJ_T0034134.1 MGP_NODShiLtJ_G0019420.1 mouse_genomes_project 12 1083080 1165625 + MGP_NODShiLtJ_P0034134 Adcy3 protein_coding protein_coding MGP_NODShiLtJ_T0034135.1 MGP_NODShiLtJ_G0019420.1 mouse_genomes_project 12 1083831 1165625 + MGP_NODShiLtJ_P0034135 Adcy3 protein_coding protein_coding MGP_NODShiLtJ_T0034136.1 MGP_NODShiLtJ_G0019420.1 mouse_genomes_project 12 1109728 1134489 + Adcy3 protein_coding processed_transcript MGP_NODShiLtJ_T0034137.1 MGP_NODShiLtJ_G0019420.1 mouse_genomes_project 12 1146486 1148600 + Adcy3 protein_coding retained_intron MGP_NODShiLtJ_T0034140.1 MGP_NODShiLtJ_G0019420.1 mouse_genomes_project 12 1155498 1158540 + Adcy3 protein_coding retained_intron MGP_NODShiLtJ_T0012709.1 MGP_NODShiLtJ_G0010817.1 mouse_genomes_project 12 90723684 90724109 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035107.1 MGP_NODShiLtJ_G0019777.1 mouse_genomes_project 12 93417855 93426823 + MGP_NODShiLtJ_P0035107 Acot1 protein_coding protein_coding MGP_NODShiLtJ_T0034486.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39534976 39626849 + MGP_NODShiLtJ_P0034486 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034487.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39535678 39628815 + MGP_NODShiLtJ_P0034487 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034488.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39535880 39626378 + MGP_NODShiLtJ_P0034488 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034489.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39535915 39537409 + MGP_NODShiLtJ_P0034489 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034490.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39535945 39594117 + MGP_NODShiLtJ_P0034490 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034491.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39536444 39626375 + MGP_NODShiLtJ_P0034491 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034492.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39536709 39627899 + Etv1 protein_coding retained_intron MGP_NODShiLtJ_T0034493.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39536725 39594029 + MGP_NODShiLtJ_P0034493 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034494.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39539065 39626776 + MGP_NODShiLtJ_P0034494 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034495.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39539076 39626561 + MGP_NODShiLtJ_P0034495 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034496.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39539104 39628803 + MGP_NODShiLtJ_P0034496 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034497.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39582227 39590075 + MGP_NODShiLtJ_P0034497 Etv1 protein_coding protein_coding MGP_NODShiLtJ_T0034498.1 MGP_NODShiLtJ_G0019556.1 mouse_genomes_project 12 39596256 39626315 + Etv1 protein_coding processed_transcript MGP_NODShiLtJ_T0009696.1 MGP_NODShiLtJ_G0007829.1 mouse_genomes_project 12 29927172 29927379 - Gm25243 miRNA miRNA MGP_NODShiLtJ_T0098771.1 MGP_NODShiLtJ_G0037165.1 mouse_genomes_project 12 78628602 78628703 + Gm24474 snRNA snRNA MGP_NODShiLtJ_T0012702.1 MGP_NODShiLtJ_G0010810.1 mouse_genomes_project 12 82209633 82209930 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012679.1 MGP_NODShiLtJ_G0010787.1 mouse_genomes_project 12 14230493 14231492 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034389.1 MGP_NODShiLtJ_G0019518.1 mouse_genomes_project 12 30799851 30821005 - MGP_NODShiLtJ_P0034389 Dld protein_coding protein_coding MGP_NODShiLtJ_T0012720.1 MGP_NODShiLtJ_G0010828.1 mouse_genomes_project 12 111266957 111267208 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012717.1 MGP_NODShiLtJ_G0010825.1 mouse_genomes_project 12 101674028 101674818 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035545.1 MGP_NODShiLtJ_G0019908.1 mouse_genomes_project 12 115892040 115897644 - MGP_NODShiLtJ_P0035545 Ifi27l2b protein_coding protein_coding MGP_NODShiLtJ_T0035106.1 MGP_NODShiLtJ_G0019776.1 mouse_genomes_project 12 93391854 93399582 + MGP_NODShiLtJ_P0035106 Acot2 protein_coding protein_coding MGP_NODShiLtJ_T0000132.1 MGP_NODShiLtJ_G0000097.1 mouse_genomes_project 12 130030098 130030188 - MGP_NODShiLtJ_P0000132 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034306.1 MGP_NODShiLtJ_G0019486.1 mouse_genomes_project 12 23425995 23426446 - MGP_NODShiLtJ_P0034306 Gm16372 protein_coding protein_coding MGP_NODShiLtJ_T0009816.1 MGP_NODShiLtJ_G0007949.1 mouse_genomes_project 12 131042854 131042918 - Gm23190 miRNA miRNA MGP_NODShiLtJ_T0034894.1 MGP_NODShiLtJ_G0019707.1 mouse_genomes_project 12 84604490 84689926 - MGP_NODShiLtJ_P0034894 Esr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034895.1 MGP_NODShiLtJ_G0019707.1 mouse_genomes_project 12 84604490 84689926 - MGP_NODShiLtJ_P0034895 Esr2 protein_coding protein_coding MGP_NODShiLtJ_T0034896.1 MGP_NODShiLtJ_G0019707.1 mouse_genomes_project 12 84604490 84679879 - MGP_NODShiLtJ_P0034896 Esr2 protein_coding protein_coding MGP_NODShiLtJ_T0034897.1 MGP_NODShiLtJ_G0019707.1 mouse_genomes_project 12 84604510 84689926 - MGP_NODShiLtJ_P0034897 Esr2 protein_coding protein_coding MGP_NODShiLtJ_T0034572.1 MGP_NODShiLtJ_G0019586.1 mouse_genomes_project 12 56371251 56447992 + MGP_NODShiLtJ_P0034572 Arhgap5 protein_coding protein_coding MGP_NODShiLtJ_T0009799.1 MGP_NODShiLtJ_G0007932.1 mouse_genomes_project 12 123095155 123095235 - Gm24321 miRNA miRNA MGP_NODShiLtJ_T0035028.1 MGP_NODShiLtJ_G0019759.1 mouse_genomes_project 12 90712213 90713263 - Med6 protein_coding retained_intron MGP_NODShiLtJ_T0035029.1 MGP_NODShiLtJ_G0019759.1 mouse_genomes_project 12 90712347 90730135 - MGP_NODShiLtJ_P0035029 Med6 protein_coding protein_coding MGP_NODShiLtJ_T0035030.1 MGP_NODShiLtJ_G0019759.1 mouse_genomes_project 12 90720398 90730182 - Med6 protein_coding retained_intron MGP_NODShiLtJ_T0009711.1 MGP_NODShiLtJ_G0007844.1 mouse_genomes_project 12 77432974 77433083 - Gm23018 miRNA miRNA MGP_NODShiLtJ_T0035720.1 MGP_NODShiLtJ_G0019971.1 mouse_genomes_project 12 124277325 124312723 - Mok protein_coding retained_intron MGP_NODShiLtJ_T0035721.1 MGP_NODShiLtJ_G0019971.1 mouse_genomes_project 12 124277325 124312714 - MGP_NODShiLtJ_P0035721 Mok protein_coding protein_coding MGP_NODShiLtJ_T0035722.1 MGP_NODShiLtJ_G0019971.1 mouse_genomes_project 12 124277325 124312723 - MGP_NODShiLtJ_P0035722 Mok protein_coding protein_coding MGP_NODShiLtJ_T0035723.1 MGP_NODShiLtJ_G0019971.1 mouse_genomes_project 12 124277568 124312536 - MGP_NODShiLtJ_P0035723 Mok protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035724.1 MGP_NODShiLtJ_G0019971.1 mouse_genomes_project 12 124285466 124312711 - MGP_NODShiLtJ_P0035724 Mok protein_coding protein_coding MGP_NODShiLtJ_T0035192.1 MGP_NODShiLtJ_G0019803.1 mouse_genomes_project 12 94460725 94477076 + MGP_NODShiLtJ_P0035192 Fcf1 protein_coding protein_coding MGP_NODShiLtJ_T0035193.1 MGP_NODShiLtJ_G0019803.1 mouse_genomes_project 12 94460809 94477064 + MGP_NODShiLtJ_P0035193 Fcf1 protein_coding protein_coding MGP_NODShiLtJ_T0035194.1 MGP_NODShiLtJ_G0019803.1 mouse_genomes_project 12 94473982 94477070 + Fcf1 protein_coding retained_intron MGP_NODShiLtJ_T0099994.1 MGP_NODShiLtJ_G0038388.1 mouse_genomes_project 12 60570828 60570958 - Gm25917 snoRNA snoRNA MGP_NODShiLtJ_T0097904.1 MGP_NODShiLtJ_G0036316.1 mouse_genomes_project 12 1309100 1309214 + Gm23756 rRNA rRNA MGP_NODShiLtJ_T0035391.1 MGP_NODShiLtJ_G0019860.1 mouse_genomes_project 12 110124254 110182703 - MGP_NODShiLtJ_P0035391 Galc protein_coding protein_coding MGP_NODShiLtJ_T0034849.1 MGP_NODShiLtJ_G0019691.1 mouse_genomes_project 12 81470529 81538217 + MGP_NODShiLtJ_P0034849 Slc38a6 protein_coding protein_coding MGP_NODShiLtJ_T0034850.1 MGP_NODShiLtJ_G0019691.1 mouse_genomes_project 12 81470540 81501018 + MGP_NODShiLtJ_P0034850 Slc38a6 protein_coding protein_coding MGP_NODShiLtJ_T0034851.1 MGP_NODShiLtJ_G0019691.1 mouse_genomes_project 12 81470658 81501007 + MGP_NODShiLtJ_P0034851 Slc38a6 protein_coding protein_coding MGP_NODShiLtJ_T0034852.1 MGP_NODShiLtJ_G0019691.1 mouse_genomes_project 12 81500630 81522564 + Slc38a6 protein_coding retained_intron MGP_NODShiLtJ_T0034853.1 MGP_NODShiLtJ_G0019691.1 mouse_genomes_project 12 81526943 81534975 + Slc38a6 protein_coding retained_intron MGP_NODShiLtJ_T0098789.1 MGP_NODShiLtJ_G0037183.1 mouse_genomes_project 12 133460426 133460533 - Gm25577 snRNA snRNA MGP_NODShiLtJ_T0034596.1 MGP_NODShiLtJ_G0019597.1 mouse_genomes_project 12 59226921 59371862 + MGP_NODShiLtJ_P0034596 protein_coding protein_coding MGP_NODShiLtJ_T0006353.1 MGP_NODShiLtJ_G0005290.1 mouse_genomes_project 12 63663304 63678967 + Gm17529 lincRNA lincRNA MGP_NODShiLtJ_T0000126.1 MGP_NODShiLtJ_G0000094.1 mouse_genomes_project 12 129536477 129536950 - MGP_NODShiLtJ_P0000126 Ighv1-47 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000127.1 MGP_NODShiLtJ_G0000094.1 mouse_genomes_project 12 129536477 129536771 - MGP_NODShiLtJ_P0000127 Ighv1-47 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0012740.1 MGP_NODShiLtJ_G0010848.1 mouse_genomes_project 12 128275241 128275553 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097910.1 MGP_NODShiLtJ_G0036322.1 mouse_genomes_project 12 28346771 28346886 - Gm23342 rRNA rRNA MGP_NODShiLtJ_T0035557.1 MGP_NODShiLtJ_G0019913.1 mouse_genomes_project 12 116147942 116154555 - MGP_NODShiLtJ_P0035557 Serpina1f protein_coding protein_coding MGP_NODShiLtJ_T0035558.1 MGP_NODShiLtJ_G0019913.1 mouse_genomes_project 12 116149532 116155424 - MGP_NODShiLtJ_P0035558 Serpina1f protein_coding protein_coding MGP_NODShiLtJ_T0035559.1 MGP_NODShiLtJ_G0019913.1 mouse_genomes_project 12 116149535 116154605 - MGP_NODShiLtJ_P0035559 Serpina1f protein_coding protein_coding MGP_NODShiLtJ_T0035488.1 MGP_NODShiLtJ_G0019888.1 mouse_genomes_project 12 114802647 114832855 + MGP_NODShiLtJ_P0035488 Golga5 protein_coding protein_coding MGP_NODShiLtJ_T0035489.1 MGP_NODShiLtJ_G0019888.1 mouse_genomes_project 12 114803427 114832855 + MGP_NODShiLtJ_P0035489 Golga5 protein_coding protein_coding MGP_NODShiLtJ_T0035735.1 MGP_NODShiLtJ_G0019976.1 mouse_genomes_project 12 124523736 124612594 + MGP_NODShiLtJ_P0035735 Rcor1 protein_coding protein_coding MGP_NODShiLtJ_T0100033.1 MGP_NODShiLtJ_G0038427.1 mouse_genomes_project 12 123030196 123030271 + AF357341 snoRNA snoRNA MGP_NODShiLtJ_T0100008.1 MGP_NODShiLtJ_G0038402.1 mouse_genomes_project 12 92058174 92058311 - Gm22149 snoRNA snoRNA MGP_NODShiLtJ_T0000849.1 MGP_NODShiLtJ_G0000779.1 mouse_genomes_project 12 123017691 123026265 + TEC TEC MGP_NODShiLtJ_T0099989.1 MGP_NODShiLtJ_G0038383.1 mouse_genomes_project 12 45655743 45655872 + Gm26326 snoRNA snoRNA MGP_NODShiLtJ_T0011231.1 MGP_NODShiLtJ_G0009364.1 mouse_genomes_project 12 122948560 122948658 + Gm27350 misc_RNA misc_RNA MGP_NODShiLtJ_T0003337.1 MGP_NODShiLtJ_G0003063.1 mouse_genomes_project 12 41084445 41086366 + Arl4aos antisense antisense MGP_NODShiLtJ_T0000074.1 MGP_NODShiLtJ_G0000058.1 mouse_genomes_project 12 127939847 127940277 - MGP_NODShiLtJ_P0000074 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035458.1 MGP_NODShiLtJ_G0019879.1 mouse_genomes_project 12 113058234 113181828 - MGP_NODShiLtJ_P0035458 Ccdc88c protein_coding protein_coding MGP_NODShiLtJ_T0035459.1 MGP_NODShiLtJ_G0019879.1 mouse_genomes_project 12 113058234 113181828 - MGP_NODShiLtJ_P0035459 Ccdc88c protein_coding protein_coding MGP_NODShiLtJ_T0034221.1 MGP_NODShiLtJ_G0019454.1 mouse_genomes_project 12 9162100 9187882 - MGP_NODShiLtJ_P0034221 Gen1 protein_coding protein_coding MGP_NODShiLtJ_T0035840.1 MGP_NODShiLtJ_G0020012.1 mouse_genomes_project 12 126484271 126493424 - MGP_NODShiLtJ_P0035840 Cdca4 protein_coding protein_coding MGP_NODShiLtJ_T0034534.1 MGP_NODShiLtJ_G0019568.1 mouse_genomes_project 12 46328924 46630885 + MGP_NODShiLtJ_P0034534 Nrcam protein_coding protein_coding MGP_NODShiLtJ_T0034535.1 MGP_NODShiLtJ_G0019568.1 mouse_genomes_project 12 46328924 46630885 + MGP_NODShiLtJ_P0034535 Nrcam protein_coding protein_coding MGP_NODShiLtJ_T0034536.1 MGP_NODShiLtJ_G0019568.1 mouse_genomes_project 12 46545385 46629670 + MGP_NODShiLtJ_P0034536 Nrcam protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000098.1 MGP_NODShiLtJ_G0000075.1 mouse_genomes_project 12 128527890 128528378 - MGP_NODShiLtJ_P0000098 Ighv6-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000099.1 MGP_NODShiLtJ_G0000075.1 mouse_genomes_project 12 128527893 128528190 - MGP_NODShiLtJ_P0000099 Ighv6-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034253.1 MGP_NODShiLtJ_G0019470.1 mouse_genomes_project 12 15378874 15395899 + MGP_NODShiLtJ_P0034253 E2f6 protein_coding protein_coding MGP_NODShiLtJ_T0034254.1 MGP_NODShiLtJ_G0019470.1 mouse_genomes_project 12 15381840 15393276 + MGP_NODShiLtJ_P0034254 E2f6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034766.1 MGP_NODShiLtJ_G0019663.1 mouse_genomes_project 12 78120011 78166879 - MGP_NODShiLtJ_P0034766 Pygl protein_coding protein_coding MGP_NODShiLtJ_T0034767.1 MGP_NODShiLtJ_G0019663.1 mouse_genomes_project 12 78126594 78127037 - Pygl protein_coding processed_transcript MGP_NODShiLtJ_T0034768.1 MGP_NODShiLtJ_G0019663.1 mouse_genomes_project 12 78141794 78166908 - Pygl protein_coding retained_intron MGP_NODShiLtJ_T0034769.1 MGP_NODShiLtJ_G0019663.1 mouse_genomes_project 12 78146760 78166641 - Pygl protein_coding processed_transcript MGP_NODShiLtJ_T0009752.1 MGP_NODShiLtJ_G0007885.1 mouse_genomes_project 12 122938965 122939040 + Mir432 miRNA miRNA MGP_NODShiLtJ_T0035378.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102023400 102067479 - MGP_NODShiLtJ_P0035378 Sel1l protein_coding protein_coding MGP_NODShiLtJ_T0035379.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102023400 102067479 - MGP_NODShiLtJ_P0035379 Sel1l protein_coding protein_coding MGP_NODShiLtJ_T0035380.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102023422 102031514 - Sel1l protein_coding processed_transcript MGP_NODShiLtJ_T0035381.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102023974 102067451 - MGP_NODShiLtJ_P0035381 Sel1l protein_coding protein_coding MGP_NODShiLtJ_T0035382.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102025996 102067452 - Sel1l protein_coding retained_intron MGP_NODShiLtJ_T0035383.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102033072 102035818 - Sel1l protein_coding retained_intron MGP_NODShiLtJ_T0035384.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102037550 102067452 - Sel1l protein_coding retained_intron MGP_NODShiLtJ_T0035385.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102042474 102050327 - Sel1l protein_coding retained_intron MGP_NODShiLtJ_T0035386.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102050568 102067461 - Sel1l protein_coding retained_intron MGP_NODShiLtJ_T0035387.1 MGP_NODShiLtJ_G0019857.1 mouse_genomes_project 12 102059824 102067462 - Sel1l protein_coding retained_intron MGP_NODShiLtJ_T0035371.1 MGP_NODShiLtJ_G0019856.1 mouse_genomes_project 12 101851544 102003187 - MGP_NODShiLtJ_P0035371 Ston2 protein_coding protein_coding MGP_NODShiLtJ_T0035372.1 MGP_NODShiLtJ_G0019856.1 mouse_genomes_project 12 101854550 101958702 - MGP_NODShiLtJ_P0035372 Ston2 protein_coding protein_coding MGP_NODShiLtJ_T0035373.1 MGP_NODShiLtJ_G0019856.1 mouse_genomes_project 12 101915007 101925637 - Ston2 protein_coding processed_transcript MGP_NODShiLtJ_T0035374.1 MGP_NODShiLtJ_G0019856.1 mouse_genomes_project 12 101925744 101995876 - MGP_NODShiLtJ_P0035374 Ston2 protein_coding protein_coding MGP_NODShiLtJ_T0035375.1 MGP_NODShiLtJ_G0019856.1 mouse_genomes_project 12 101947352 101986820 - Ston2 protein_coding processed_transcript MGP_NODShiLtJ_T0035376.1 MGP_NODShiLtJ_G0019856.1 mouse_genomes_project 12 101958464 101960931 - MGP_NODShiLtJ_P0035376 Ston2 protein_coding protein_coding MGP_NODShiLtJ_T0035377.1 MGP_NODShiLtJ_G0019856.1 mouse_genomes_project 12 102002551 102005141 - Ston2 protein_coding processed_transcript MGP_NODShiLtJ_T0034263.1 MGP_NODShiLtJ_G0019473.1 mouse_genomes_project 12 15586519 15597002 - MGP_NODShiLtJ_P0034263 2410004P03Rik protein_coding protein_coding MGP_NODShiLtJ_T0034264.1 MGP_NODShiLtJ_G0019473.1 mouse_genomes_project 12 15589888 15596829 - MGP_NODShiLtJ_P0034264 2410004P03Rik protein_coding protein_coding MGP_NODShiLtJ_T0034265.1 MGP_NODShiLtJ_G0019473.1 mouse_genomes_project 12 15591437 15596778 - MGP_NODShiLtJ_P0034265 2410004P03Rik protein_coding protein_coding MGP_NODShiLtJ_T0034641.1 MGP_NODShiLtJ_G0019618.1 mouse_genomes_project 12 62809036 62811153 + MGP_NODShiLtJ_P0034641 Sstr1 protein_coding protein_coding MGP_NODShiLtJ_T0034642.1 MGP_NODShiLtJ_G0019618.1 mouse_genomes_project 12 62809068 62811706 + MGP_NODShiLtJ_P0034642 Sstr1 protein_coding protein_coding MGP_NODShiLtJ_T0000130.1 MGP_NODShiLtJ_G0000096.1 mouse_genomes_project 12 129606767 129607061 - MGP_NODShiLtJ_P0000130 Ighv1-49 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000131.1 MGP_NODShiLtJ_G0000096.1 mouse_genomes_project 12 129606767 129607069 - MGP_NODShiLtJ_P0000131 Ighv1-49 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0003359.1 MGP_NODShiLtJ_G0003081.1 mouse_genomes_project 12 92370184 92408162 - Gm29530 antisense antisense MGP_NODShiLtJ_T0003362.1 MGP_NODShiLtJ_G0003084.1 mouse_genomes_project 12 94586982 94588837 + Prox2os antisense antisense MGP_NODShiLtJ_T0035914.1 MGP_NODShiLtJ_G0020038.1 mouse_genomes_project 12 134182815 134274964 - MGP_NODShiLtJ_P0035914 Itgb8 protein_coding protein_coding MGP_NODShiLtJ_T0035915.1 MGP_NODShiLtJ_G0020038.1 mouse_genomes_project 12 134214972 134274963 - Itgb8 protein_coding retained_intron MGP_NODShiLtJ_T0035916.1 MGP_NODShiLtJ_G0020038.1 mouse_genomes_project 12 134228577 134274932 - Itgb8 protein_coding retained_intron MGP_NODShiLtJ_T0098182.1 MGP_NODShiLtJ_G0036594.1 mouse_genomes_project 12 89393387 89393526 - Scarna3b scaRNA scaRNA MGP_NODShiLtJ_T0006371.1 MGP_NODShiLtJ_G0005304.1 mouse_genomes_project 12 93451068 93468782 - 4732463B04Rik lincRNA lincRNA MGP_NODShiLtJ_T0034601.1 MGP_NODShiLtJ_G0019602.1 mouse_genomes_project 12 59493294 59599933 + MGP_NODShiLtJ_P0034601 1110008L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0034602.1 MGP_NODShiLtJ_G0019602.1 mouse_genomes_project 12 59496354 59600009 + MGP_NODShiLtJ_P0034602 1110008L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0034603.1 MGP_NODShiLtJ_G0019602.1 mouse_genomes_project 12 59496467 59501331 + 1110008L16Rik protein_coding retained_intron MGP_NODShiLtJ_T0034604.1 MGP_NODShiLtJ_G0019602.1 mouse_genomes_project 12 59496960 59600026 + MGP_NODShiLtJ_P0034604 1110008L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0034605.1 MGP_NODShiLtJ_G0019602.1 mouse_genomes_project 12 59496978 59600046 + MGP_NODShiLtJ_P0034605 1110008L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0034606.1 MGP_NODShiLtJ_G0019602.1 mouse_genomes_project 12 59497003 59600026 + MGP_NODShiLtJ_P0034606 1110008L16Rik protein_coding protein_coding MGP_NODShiLtJ_T0009754.1 MGP_NODShiLtJ_G0007887.1 mouse_genomes_project 12 122939336 122939398 + Mir136 miRNA miRNA MGP_NODShiLtJ_T0034947.1 MGP_NODShiLtJ_G0019729.1 mouse_genomes_project 12 87729604 87747836 - MGP_NODShiLtJ_P0034947 Plek2 protein_coding protein_coding MGP_NODShiLtJ_T0034478.1 MGP_NODShiLtJ_G0019554.1 mouse_genomes_project 12 37531147 37993598 + MGP_NODShiLtJ_P0034478 Agmo protein_coding protein_coding MGP_NODShiLtJ_T0034479.1 MGP_NODShiLtJ_G0019554.1 mouse_genomes_project 12 37531256 37535193 + MGP_NODShiLtJ_P0034479 Agmo protein_coding protein_coding MGP_NODShiLtJ_T0034480.1 MGP_NODShiLtJ_G0019554.1 mouse_genomes_project 12 37531285 37771318 + Agmo protein_coding retained_intron MGP_NODShiLtJ_T0034481.1 MGP_NODShiLtJ_G0019554.1 mouse_genomes_project 12 37531366 37797282 + MGP_NODShiLtJ_P0034481 Agmo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034482.1 MGP_NODShiLtJ_G0019554.1 mouse_genomes_project 12 37531548 37974004 + MGP_NODShiLtJ_P0034482 Agmo protein_coding protein_coding MGP_NODShiLtJ_T0034483.1 MGP_NODShiLtJ_G0019554.1 mouse_genomes_project 12 37531602 37992920 + MGP_NODShiLtJ_P0034483 Agmo protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000104.1 MGP_NODShiLtJ_G0000079.1 mouse_genomes_project 12 128593461 128593901 - MGP_NODShiLtJ_P0000104 Ighv8-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035650.1 MGP_NODShiLtJ_G0019952.1 mouse_genomes_project 12 121536970 121564996 + MGP_NODShiLtJ_P0035650 Hhipl1 protein_coding protein_coding MGP_NODShiLtJ_T0034837.1 MGP_NODShiLtJ_G0019687.1 mouse_genomes_project 12 81200573 81203361 - Six1 protein_coding processed_transcript MGP_NODShiLtJ_T0034838.1 MGP_NODShiLtJ_G0019687.1 mouse_genomes_project 12 81202372 81207725 - MGP_NODShiLtJ_P0034838 Six1 protein_coding protein_coding MGP_NODShiLtJ_T0034839.1 MGP_NODShiLtJ_G0019687.1 mouse_genomes_project 12 81204076 81218360 - Six1 protein_coding processed_transcript MGP_NODShiLtJ_T0034840.1 MGP_NODShiLtJ_G0019687.1 mouse_genomes_project 12 81204319 81205837 - Six1 protein_coding processed_transcript MGP_NODShiLtJ_T0035258.1 MGP_NODShiLtJ_G0019821.1 mouse_genomes_project 12 95603679 95625383 - MGP_NODShiLtJ_P0035258 Tgfb3 protein_coding protein_coding MGP_NODShiLtJ_T0098479.1 MGP_NODShiLtJ_G0036877.1 mouse_genomes_project 12 81098276 81121160 + Gm26709 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0000030.1 MGP_NODShiLtJ_G0000024.1 mouse_genomes_project 12 127209437 127209447 - IG_D_pseudogene IG_D_pseudogene MGP_NODShiLtJ_T0034753.1 MGP_NODShiLtJ_G0019658.1 mouse_genomes_project 12 77808703 77883151 + MGP_NODShiLtJ_P0034753 Atl1 protein_coding protein_coding MGP_NODShiLtJ_T0034728.1 MGP_NODShiLtJ_G0019649.1 mouse_genomes_project 12 77159699 77220065 - MGP_NODShiLtJ_P0034728 Nemf protein_coding protein_coding MGP_NODShiLtJ_T0034331.1 MGP_NODShiLtJ_G0019495.1 mouse_genomes_project 12 25379328 25493110 - MGP_NODShiLtJ_P0034331 Rnf144a protein_coding protein_coding MGP_NODShiLtJ_T0034332.1 MGP_NODShiLtJ_G0019495.1 mouse_genomes_project 12 25379328 25493110 - MGP_NODShiLtJ_P0034332 Rnf144a protein_coding protein_coding MGP_NODShiLtJ_T0000023.1 MGP_NODShiLtJ_G0000017.1 mouse_genomes_project 12 127209205 127209230 - MGP_NODShiLtJ_P0000023 Gm37327 IG_D_gene IG_D_gene MGP_NODShiLtJ_T0000029.1 MGP_NODShiLtJ_G0000023.1 mouse_genomes_project 12 127209205 127209230 - IG_D_pseudogene IG_D_pseudogene MGP_NODShiLtJ_T0034199.1 MGP_NODShiLtJ_G0019444.1 mouse_genomes_project 12 6366602 6391578 + MGP_NODShiLtJ_P0034199 Sdc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034200.1 MGP_NODShiLtJ_G0019444.1 mouse_genomes_project 12 6368162 6386764 + Sdc1 protein_coding retained_intron MGP_NODShiLtJ_T0034201.1 MGP_NODShiLtJ_G0019444.1 mouse_genomes_project 12 6368641 6387329 + Sdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0034204.1 MGP_NODShiLtJ_G0019447.1 mouse_genomes_project 12 6596452 6653488 + MGP_NODShiLtJ_P0034204 Wdr35 protein_coding protein_coding MGP_NODShiLtJ_T0034205.1 MGP_NODShiLtJ_G0019447.1 mouse_genomes_project 12 6596571 6615013 + Wdr35 protein_coding retained_intron MGP_NODShiLtJ_T0034206.1 MGP_NODShiLtJ_G0019447.1 mouse_genomes_project 12 6596571 6615018 + MGP_NODShiLtJ_P0034206 Wdr35 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034207.1 MGP_NODShiLtJ_G0019447.1 mouse_genomes_project 12 6596607 6653487 + MGP_NODShiLtJ_P0034207 Wdr35 protein_coding protein_coding MGP_NODShiLtJ_T0034208.1 MGP_NODShiLtJ_G0019447.1 mouse_genomes_project 12 6596619 6647634 + Wdr35 protein_coding retained_intron MGP_NODShiLtJ_T0034209.1 MGP_NODShiLtJ_G0019447.1 mouse_genomes_project 12 6597429 6609069 + Wdr35 protein_coding retained_intron MGP_NODShiLtJ_T0034210.1 MGP_NODShiLtJ_G0019447.1 mouse_genomes_project 12 6647240 6649107 + Wdr35 protein_coding retained_intron MGP_NODShiLtJ_T0000235.1 MGP_NODShiLtJ_G0000173.1 mouse_genomes_project 12 127411370 127411839 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0009802.1 MGP_NODShiLtJ_G0007935.1 mouse_genomes_project 12 123095712 123095793 + Mir410 miRNA miRNA MGP_NODShiLtJ_T0006341.1 MGP_NODShiLtJ_G0005282.1 mouse_genomes_project 12 32438803 32443836 + Gdap10 lincRNA lincRNA MGP_NODShiLtJ_T0009810.1 MGP_NODShiLtJ_G0007943.1 mouse_genomes_project 12 126385858 126385928 + Mir6940 miRNA miRNA MGP_NODShiLtJ_T0035590.1 MGP_NODShiLtJ_G0019930.1 mouse_genomes_project 12 117574702 117683632 - MGP_NODShiLtJ_P0035590 Clmn protein_coding protein_coding MGP_NODShiLtJ_T0035591.1 MGP_NODShiLtJ_G0019930.1 mouse_genomes_project 12 117574702 117683632 - MGP_NODShiLtJ_P0035591 Clmn protein_coding protein_coding MGP_NODShiLtJ_T0100014.1 MGP_NODShiLtJ_G0038408.1 mouse_genomes_project 12 114568090 114568305 - Gm25203 snoRNA snoRNA MGP_NODShiLtJ_T0098181.1 MGP_NODShiLtJ_G0036593.1 mouse_genomes_project 12 31403536 31403671 + Gm25913 scaRNA scaRNA MGP_NODShiLtJ_T0098781.1 MGP_NODShiLtJ_G0037175.1 mouse_genomes_project 12 106640706 106640813 - Gm26055 snRNA snRNA MGP_NODShiLtJ_T0012676.1 MGP_NODShiLtJ_G0010784.1 mouse_genomes_project 12 6386311 6389021 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000146.1 MGP_NODShiLtJ_G0000106.1 mouse_genomes_project 12 130787776 130788177 - MGP_NODShiLtJ_P0000146 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000097.1 MGP_NODShiLtJ_G0000074.1 mouse_genomes_project 12 128512693 128513151 - MGP_NODShiLtJ_P0000097 Ighv6-3 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0009786.1 MGP_NODShiLtJ_G0007919.1 mouse_genomes_project 12 123079105 123079179 + Mir539 miRNA miRNA MGP_NODShiLtJ_T0009759.1 MGP_NODShiLtJ_G0007892.1 mouse_genomes_project 12 123030882 123030959 + Mir882 miRNA miRNA MGP_NODShiLtJ_T0035828.1 MGP_NODShiLtJ_G0020007.1 mouse_genomes_project 12 126327381 126332709 + MGP_NODShiLtJ_P0035828 Zbtb42 protein_coding protein_coding MGP_NODShiLtJ_T0035829.1 MGP_NODShiLtJ_G0020007.1 mouse_genomes_project 12 126327393 126332709 + MGP_NODShiLtJ_P0035829 Zbtb42 protein_coding protein_coding MGP_NODShiLtJ_T0035830.1 MGP_NODShiLtJ_G0020007.1 mouse_genomes_project 12 126327431 126329932 + MGP_NODShiLtJ_P0035830 Zbtb42 protein_coding protein_coding MGP_NODShiLtJ_T0006378.1 MGP_NODShiLtJ_G0005311.1 mouse_genomes_project 12 100898192 100910782 + Gm26512 lincRNA lincRNA MGP_NODShiLtJ_T0006434.1 MGP_NODShiLtJ_G0005341.1 mouse_genomes_project 12 124312812 124315512 + 4921507G05Rik lincRNA lincRNA MGP_NODShiLtJ_T0034801.1 MGP_NODShiLtJ_G0019675.1 mouse_genomes_project 12 80095646 80097020 - MGP_NODShiLtJ_P0034801 Gpr135 protein_coding protein_coding MGP_NODShiLtJ_T0034419.1 MGP_NODShiLtJ_G0019527.1 mouse_genomes_project 12 31512355 31618773 - MGP_NODShiLtJ_P0034419 Prkar2b protein_coding protein_coding MGP_NODShiLtJ_T0035355.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101175564 101588209 - MGP_NODShiLtJ_P0035355 Cep128 protein_coding protein_coding MGP_NODShiLtJ_T0035356.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101175564 101448479 - MGP_NODShiLtJ_P0035356 Cep128 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035357.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101176412 101245291 - Cep128 protein_coding processed_transcript MGP_NODShiLtJ_T0035358.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101176414 101208958 - Cep128 protein_coding processed_transcript MGP_NODShiLtJ_T0035359.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101176637 101363560 - Cep128 protein_coding processed_transcript MGP_NODShiLtJ_T0035360.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101200548 101363613 - Cep128 protein_coding processed_transcript MGP_NODShiLtJ_T0035361.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101396695 101441590 - MGP_NODShiLtJ_P0035361 Cep128 protein_coding protein_coding MGP_NODShiLtJ_T0035362.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101487497 101588209 - Cep128 protein_coding retained_intron MGP_NODShiLtJ_T0035363.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101520131 101534995 - Cep128 protein_coding processed_transcript MGP_NODShiLtJ_T0035364.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101542133 101588159 - Cep128 protein_coding retained_intron MGP_NODShiLtJ_T0035365.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101543859 101588209 - Cep128 protein_coding processed_transcript MGP_NODShiLtJ_T0035366.1 MGP_NODShiLtJ_G0019853.1 mouse_genomes_project 12 101566990 101588153 - Cep128 protein_coding retained_intron MGP_NODShiLtJ_T0009735.1 MGP_NODShiLtJ_G0007868.1 mouse_genomes_project 12 122040422 122040481 - Mir6988 miRNA miRNA MGP_NODShiLtJ_T0035814.1 MGP_NODShiLtJ_G0020002.1 mouse_genomes_project 12 126138972 126149949 - MGP_NODShiLtJ_P0035814 Tmem179 protein_coding protein_coding MGP_NODShiLtJ_T0009691.1 MGP_NODShiLtJ_G0007824.1 mouse_genomes_project 12 14304003 14304111 - Mir6387 miRNA miRNA MGP_NODShiLtJ_T0098754.1 MGP_NODShiLtJ_G0037148.1 mouse_genomes_project 12 58276563 58276712 + Gm22220 snRNA snRNA MGP_NODShiLtJ_T0006391.1 MGP_NODShiLtJ_G0005323.1 mouse_genomes_project 12 119524310 119530313 - 1700121N20Rik lincRNA lincRNA MGP_NODShiLtJ_T0101579.1 MGP_NODShiLtJ_G0039749.1 mouse_genomes_project 12 52132926 52135604 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006328.1 MGP_NODShiLtJ_G0005272.1 mouse_genomes_project 12 9369397 9378321 + 4930511A02Rik lincRNA lincRNA MGP_NODShiLtJ_T0009726.1 MGP_NODShiLtJ_G0007859.1 mouse_genomes_project 12 99351018 99351100 + Gm23989 miRNA miRNA MGP_NODShiLtJ_T0011226.1 MGP_NODShiLtJ_G0009359.1 mouse_genomes_project 12 107701429 107701726 - Gm26480 misc_RNA misc_RNA MGP_NODShiLtJ_T0034913.1 MGP_NODShiLtJ_G0019716.1 mouse_genomes_project 12 85077816 85127587 + MGP_NODShiLtJ_P0034913 Plekhg3 protein_coding protein_coding MGP_NODShiLtJ_T0034914.1 MGP_NODShiLtJ_G0019716.1 mouse_genomes_project 12 85095529 85128967 + MGP_NODShiLtJ_P0034914 Plekhg3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009773.1 MGP_NODShiLtJ_G0007906.1 mouse_genomes_project 12 123068101 123068200 + Mir666 miRNA miRNA MGP_NODShiLtJ_T0009720.1 MGP_NODShiLtJ_G0007853.1 mouse_genomes_project 12 94756646 94756709 - Mir6938 miRNA miRNA MGP_NODShiLtJ_T0035170.1 MGP_NODShiLtJ_G0019796.1 mouse_genomes_project 12 94118027 94131562 + MGP_NODShiLtJ_P0035170 Vrtn protein_coding protein_coding MGP_NODShiLtJ_T0035171.1 MGP_NODShiLtJ_G0019796.1 mouse_genomes_project 12 94119563 94131562 + MGP_NODShiLtJ_P0035171 Vrtn protein_coding protein_coding MGP_NODShiLtJ_T0035172.1 MGP_NODShiLtJ_G0019796.1 mouse_genomes_project 12 94119904 94131562 + MGP_NODShiLtJ_P0035172 Vrtn protein_coding protein_coding MGP_NODShiLtJ_T0034354.1 MGP_NODShiLtJ_G0019507.1 mouse_genomes_project 12 28846217 29257042 + MGP_NODShiLtJ_P0034354 Myt1l protein_coding protein_coding MGP_NODShiLtJ_T0034355.1 MGP_NODShiLtJ_G0019507.1 mouse_genomes_project 12 28853542 29257042 + MGP_NODShiLtJ_P0034355 Myt1l protein_coding protein_coding MGP_NODShiLtJ_T0034688.1 MGP_NODShiLtJ_G0019633.1 mouse_genomes_project 12 71840068 71873288 + MGP_NODShiLtJ_P0034688 Prpf39 protein_coding protein_coding MGP_NODShiLtJ_T0034689.1 MGP_NODShiLtJ_G0019633.1 mouse_genomes_project 12 71840101 71873288 + MGP_NODShiLtJ_P0034689 Prpf39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034690.1 MGP_NODShiLtJ_G0019633.1 mouse_genomes_project 12 71847522 71869898 + MGP_NODShiLtJ_P0034690 Prpf39 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101586.1 MGP_NODShiLtJ_G0039755.1 mouse_genomes_project 12 116269738 116340203 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003333.1 MGP_NODShiLtJ_G0003059.1 mouse_genomes_project 12 774347 777299 - Dnmt3aos antisense antisense MGP_NODShiLtJ_T0100005.1 MGP_NODShiLtJ_G0038399.1 mouse_genomes_project 12 81312433 81312565 - Gm23910 snoRNA snoRNA MGP_NODShiLtJ_T0035882.1 MGP_NODShiLtJ_G0020026.1 mouse_genomes_project 12 130836017 130848899 + MGP_NODShiLtJ_P0035882 Zfp386 protein_coding protein_coding MGP_NODShiLtJ_T0035883.1 MGP_NODShiLtJ_G0020026.1 mouse_genomes_project 12 130836057 130843418 + Zfp386 protein_coding retained_intron MGP_NODShiLtJ_T0035884.1 MGP_NODShiLtJ_G0020026.1 mouse_genomes_project 12 130836069 130851667 + MGP_NODShiLtJ_P0035884 Zfp386 protein_coding protein_coding MGP_NODShiLtJ_T0035885.1 MGP_NODShiLtJ_G0020026.1 mouse_genomes_project 12 130836122 130839919 + Zfp386 protein_coding retained_intron MGP_NODShiLtJ_T0035165.1 MGP_NODShiLtJ_G0019793.1 mouse_genomes_project 12 93903975 93925396 + MGP_NODShiLtJ_P0035165 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035166.1 MGP_NODShiLtJ_G0019793.1 mouse_genomes_project 12 93903975 93925300 + MGP_NODShiLtJ_P0035166 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035585.1 MGP_NODShiLtJ_G0019925.1 mouse_genomes_project 12 117175033 117180057 + MGP_NODShiLtJ_P0035585 Serpina3m protein_coding protein_coding MGP_NODShiLtJ_T0034222.1 MGP_NODShiLtJ_G0019455.1 mouse_genomes_project 12 9187980 9248059 + MGP_NODShiLtJ_P0034222 Smc6 protein_coding protein_coding MGP_NODShiLtJ_T0006403.1 MGP_NODShiLtJ_G0005332.1 mouse_genomes_project 12 120908092 120919762 - 4930465M20Rik lincRNA lincRNA MGP_NODShiLtJ_T0006404.1 MGP_NODShiLtJ_G0005332.1 mouse_genomes_project 12 120913691 120919770 - 4930465M20Rik lincRNA lincRNA MGP_NODShiLtJ_T0034966.1 MGP_NODShiLtJ_G0019738.1 mouse_genomes_project 12 88203523 88435431 + MGP_NODShiLtJ_P0034966 Rad51b protein_coding protein_coding MGP_NODShiLtJ_T0034967.1 MGP_NODShiLtJ_G0019738.1 mouse_genomes_project 12 88203523 88236012 + MGP_NODShiLtJ_P0034967 Rad51b protein_coding protein_coding MGP_NODShiLtJ_T0098267.1 MGP_NODShiLtJ_G0036676.1 mouse_genomes_project 12 60941708 60945646 + C87198 sense_intronic sense_intronic MGP_NODShiLtJ_T0098268.1 MGP_NODShiLtJ_G0036676.1 mouse_genomes_project 12 60941718 60945182 + C87198 sense_intronic sense_intronic MGP_NODShiLtJ_T0034919.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85312591 85477751 + MGP_NODShiLtJ_P0034919 Fntb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034920.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85312600 85476634 + MGP_NODShiLtJ_P0034920 Fntb protein_coding protein_coding MGP_NODShiLtJ_T0034929.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85392758 85478504 + MGP_NODShiLtJ_P0034929 Fntb protein_coding protein_coding MGP_NODShiLtJ_T0034930.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85392777 85399921 + Fntb protein_coding processed_transcript MGP_NODShiLtJ_T0034931.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85392794 85478512 + MGP_NODShiLtJ_P0034931 Fntb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034932.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85395639 85444669 + Fntb protein_coding processed_transcript MGP_NODShiLtJ_T0034933.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85443921 85466918 + Fntb protein_coding processed_transcript MGP_NODShiLtJ_T0034934.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85466171 85466997 + Fntb protein_coding processed_transcript MGP_NODShiLtJ_T0034935.1 MGP_NODShiLtJ_G0019719.1 mouse_genomes_project 12 85466663 85471323 + Fntb protein_coding retained_intron MGP_NODShiLtJ_T0009736.1 MGP_NODShiLtJ_G0007869.1 mouse_genomes_project 12 122117012 122117108 + Mir345 miRNA miRNA MGP_NODShiLtJ_T0034718.1 MGP_NODShiLtJ_G0019645.1 mouse_genomes_project 12 77034366 77037024 + MGP_NODShiLtJ_P0034718 9330151L19Rik protein_coding protein_coding MGP_NODShiLtJ_T0000103.1 MGP_NODShiLtJ_G0000078.1 mouse_genomes_project 12 128584378 128584836 - MGP_NODShiLtJ_P0000103 Ighv6-7 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034228.1 MGP_NODShiLtJ_G0019460.1 mouse_genomes_project 12 10986290 10986630 + MGP_NODShiLtJ_P0034228 Rpl36-ps3 protein_coding protein_coding MGP_NODShiLtJ_T0097922.1 MGP_NODShiLtJ_G0036334.1 mouse_genomes_project 12 116689918 116690026 + Gm23289 rRNA rRNA MGP_NODShiLtJ_T0009812.1 MGP_NODShiLtJ_G0007945.1 mouse_genomes_project 12 126757623 126757723 - Gm44471 miRNA miRNA MGP_NODShiLtJ_T0006355.1 MGP_NODShiLtJ_G0005292.1 mouse_genomes_project 12 78167136 78174392 + F730035M05Rik lincRNA lincRNA MGP_NODShiLtJ_T0017181.1 MGP_NODShiLtJ_G0015105.1 mouse_genomes_project 12 101885440 101896676 - Gm8378 processed_transcript processed_transcript MGP_NODShiLtJ_T0017182.1 MGP_NODShiLtJ_G0015105.1 mouse_genomes_project 12 101893188 101896717 - Gm8378 processed_transcript processed_transcript MGP_NODShiLtJ_T0017183.1 MGP_NODShiLtJ_G0015105.1 mouse_genomes_project 12 101895073 101896717 - Gm8378 processed_transcript processed_transcript MGP_NODShiLtJ_T0097921.1 MGP_NODShiLtJ_G0036333.1 mouse_genomes_project 12 109198907 109198987 - Gm23558 rRNA rRNA MGP_NODShiLtJ_T0035499.1 MGP_NODShiLtJ_G0019894.1 mouse_genomes_project 12 115100355 115104157 + MGP_NODShiLtJ_P0035499 Tmem251 protein_coding protein_coding MGP_NODShiLtJ_T0034948.1 MGP_NODShiLtJ_G0019730.1 mouse_genomes_project 12 87815921 87862903 - MGP_NODShiLtJ_P0034948 protein_coding protein_coding MGP_NODShiLtJ_T0034949.1 MGP_NODShiLtJ_G0019730.1 mouse_genomes_project 12 87827445 87834950 - protein_coding processed_transcript MGP_NODShiLtJ_T0034950.1 MGP_NODShiLtJ_G0019730.1 mouse_genomes_project 12 87831934 87862289 - protein_coding processed_transcript MGP_NODShiLtJ_T0003365.1 MGP_NODShiLtJ_G0003087.1 mouse_genomes_project 12 111367264 111390107 + 3300002A11Rik antisense antisense MGP_NODShiLtJ_T0003366.1 MGP_NODShiLtJ_G0003087.1 mouse_genomes_project 12 111373944 111390107 + 3300002A11Rik antisense antisense MGP_NODShiLtJ_T0034293.1 MGP_NODShiLtJ_G0019482.1 mouse_genomes_project 12 20095950 20125426 + MGP_NODShiLtJ_P0034293 Cpsf3 protein_coding protein_coding MGP_NODShiLtJ_T0034267.1 MGP_NODShiLtJ_G0019475.1 mouse_genomes_project 12 15872206 15887474 + Pdia6 protein_coding retained_intron MGP_NODShiLtJ_T0034268.1 MGP_NODShiLtJ_G0019475.1 mouse_genomes_project 12 15872206 15890486 + MGP_NODShiLtJ_P0034268 Pdia6 protein_coding protein_coding MGP_NODShiLtJ_T0034269.1 MGP_NODShiLtJ_G0019475.1 mouse_genomes_project 12 15872269 15879889 + Pdia6 protein_coding processed_transcript MGP_NODShiLtJ_T0034270.1 MGP_NODShiLtJ_G0019475.1 mouse_genomes_project 12 15879518 15883312 + Pdia6 protein_coding retained_intron MGP_NODShiLtJ_T0034271.1 MGP_NODShiLtJ_G0019475.1 mouse_genomes_project 12 15882902 15884601 + Pdia6 protein_coding processed_transcript MGP_NODShiLtJ_T0035067.1 MGP_NODShiLtJ_G0019767.1 mouse_genomes_project 12 92870025 92896287 + MGP_NODShiLtJ_P0035067 Dcaf4 protein_coding protein_coding MGP_NODShiLtJ_T0000124.1 MGP_NODShiLtJ_G0000093.1 mouse_genomes_project 12 129465238 129465532 - MGP_NODShiLtJ_P0000124 Ighv1-42 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000125.1 MGP_NODShiLtJ_G0000093.1 mouse_genomes_project 12 129465238 129465670 - MGP_NODShiLtJ_P0000125 Ighv1-42 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034212.1 MGP_NODShiLtJ_G0019449.1 mouse_genomes_project 12 7271623 7278677 + MGP_NODShiLtJ_P0034212 Osr1 protein_coding protein_coding MGP_NODShiLtJ_T0011223.1 MGP_NODShiLtJ_G0009356.1 mouse_genomes_project 12 96248812 96248897 + Gm27993 misc_RNA misc_RNA MGP_NODShiLtJ_T0035286.1 MGP_NODShiLtJ_G0019829.1 mouse_genomes_project 12 96628265 96633562 - MGP_NODShiLtJ_P0035286 Zdhhc22 protein_coding protein_coding MGP_NODShiLtJ_T0035209.1 MGP_NODShiLtJ_G0019809.1 mouse_genomes_project 12 94728644 94737622 + MGP_NODShiLtJ_P0035209 Eif2b2 protein_coding protein_coding MGP_NODShiLtJ_T0035210.1 MGP_NODShiLtJ_G0019809.1 mouse_genomes_project 12 94728667 94732003 + MGP_NODShiLtJ_P0035210 Eif2b2 protein_coding protein_coding MGP_NODShiLtJ_T0035211.1 MGP_NODShiLtJ_G0019809.1 mouse_genomes_project 12 94728676 94737144 + MGP_NODShiLtJ_P0035211 Eif2b2 protein_coding protein_coding MGP_NODShiLtJ_T0035212.1 MGP_NODShiLtJ_G0019809.1 mouse_genomes_project 12 94728678 94729113 + Eif2b2 protein_coding retained_intron MGP_NODShiLtJ_T0035213.1 MGP_NODShiLtJ_G0019809.1 mouse_genomes_project 12 94728709 94731990 + Eif2b2 protein_coding retained_intron MGP_NODShiLtJ_T0035214.1 MGP_NODShiLtJ_G0019809.1 mouse_genomes_project 12 94728745 94732652 + Eif2b2 protein_coding retained_intron MGP_NODShiLtJ_T0035215.1 MGP_NODShiLtJ_G0019809.1 mouse_genomes_project 12 94735519 94737487 + Eif2b2 protein_coding retained_intron MGP_NODShiLtJ_T0034858.1 MGP_NODShiLtJ_G0019695.1 mouse_genomes_project 12 82153591 82180365 + MGP_NODShiLtJ_P0034858 Hif1a protein_coding protein_coding MGP_NODShiLtJ_T0034859.1 MGP_NODShiLtJ_G0019695.1 mouse_genomes_project 12 82153977 82193470 + MGP_NODShiLtJ_P0034859 Hif1a protein_coding protein_coding MGP_NODShiLtJ_T0034860.1 MGP_NODShiLtJ_G0019695.1 mouse_genomes_project 12 82173891 82175822 + Hif1a protein_coding retained_intron MGP_NODShiLtJ_T0034861.1 MGP_NODShiLtJ_G0019695.1 mouse_genomes_project 12 82185436 82187648 + Hif1a protein_coding processed_transcript MGP_NODShiLtJ_T0034223.1 MGP_NODShiLtJ_G0019456.1 mouse_genomes_project 12 9253522 9367804 - MGP_NODShiLtJ_P0034223 Vsnl1 protein_coding protein_coding MGP_NODShiLtJ_T0009760.1 MGP_NODShiLtJ_G0007893.1 mouse_genomes_project 12 123060122 123060188 + Mir379 miRNA miRNA MGP_NODShiLtJ_T0034376.1 MGP_NODShiLtJ_G0019514.1 mouse_genomes_project 12 30325906 30384590 + Sh3yl1 protein_coding retained_intron MGP_NODShiLtJ_T0034377.1 MGP_NODShiLtJ_G0019514.1 mouse_genomes_project 12 30325906 30384734 + MGP_NODShiLtJ_P0034377 Sh3yl1 protein_coding protein_coding MGP_NODShiLtJ_T0034378.1 MGP_NODShiLtJ_G0019514.1 mouse_genomes_project 12 30325930 30384723 + MGP_NODShiLtJ_P0034378 Sh3yl1 protein_coding protein_coding MGP_NODShiLtJ_T0034379.1 MGP_NODShiLtJ_G0019514.1 mouse_genomes_project 12 30326425 30384728 + Sh3yl1 protein_coding processed_transcript MGP_NODShiLtJ_T0034308.1 MGP_NODShiLtJ_G0019488.1 mouse_genomes_project 12 23535128 23581820 + MGP_NODShiLtJ_P0034308 Grhl1 protein_coding protein_coding MGP_NODShiLtJ_T0034309.1 MGP_NODShiLtJ_G0019488.1 mouse_genomes_project 12 23544341 23581824 + MGP_NODShiLtJ_P0034309 Grhl1 protein_coding protein_coding MGP_NODShiLtJ_T0034979.1 MGP_NODShiLtJ_G0019746.1 mouse_genomes_project 12 89713505 89745333 + MGP_NODShiLtJ_P0034979 Plekhd1 protein_coding protein_coding MGP_NODShiLtJ_T0034980.1 MGP_NODShiLtJ_G0019746.1 mouse_genomes_project 12 89727715 89741804 + Plekhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0034981.1 MGP_NODShiLtJ_G0019746.1 mouse_genomes_project 12 89741876 89743126 + MGP_NODShiLtJ_P0034981 Plekhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034982.1 MGP_NODShiLtJ_G0019746.1 mouse_genomes_project 12 89742850 89744029 + Plekhd1 protein_coding retained_intron MGP_NODShiLtJ_T0009796.1 MGP_NODShiLtJ_G0007929.1 mouse_genomes_project 12 123092507 123092575 + Mir377 miRNA miRNA MGP_NODShiLtJ_T0009721.1 MGP_NODShiLtJ_G0007854.1 mouse_genomes_project 12 95245124 95245185 - miRNA miRNA MGP_NODShiLtJ_T0006357.1 MGP_NODShiLtJ_G0005294.1 mouse_genomes_project 12 82566537 82578855 + lincRNA lincRNA MGP_NODShiLtJ_T0006358.1 MGP_NODShiLtJ_G0005294.1 mouse_genomes_project 12 82566545 82578869 + lincRNA lincRNA MGP_NODShiLtJ_T0006359.1 MGP_NODShiLtJ_G0005294.1 mouse_genomes_project 12 82570991 82578869 + lincRNA lincRNA MGP_NODShiLtJ_T0034447.1 MGP_NODShiLtJ_G0019534.1 mouse_genomes_project 12 33054354 33060770 + MGP_NODShiLtJ_P0034447 Efcab10 protein_coding protein_coding MGP_NODShiLtJ_T0034686.1 MGP_NODShiLtJ_G0019631.1 mouse_genomes_project 12 71731282 71756054 - MGP_NODShiLtJ_P0034686 Klhl28 protein_coding protein_coding MGP_NODShiLtJ_T0009761.1 MGP_NODShiLtJ_G0007894.1 mouse_genomes_project 12 123061233 123061315 + Mir411 miRNA miRNA MGP_NODShiLtJ_T0012682.1 MGP_NODShiLtJ_G0010790.1 mouse_genomes_project 12 52411313 52412324 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035206.1 MGP_NODShiLtJ_G0019806.1 mouse_genomes_project 12 94611389 94635856 + MGP_NODShiLtJ_P0035206 Dlst protein_coding protein_coding MGP_NODShiLtJ_T0035089.1 MGP_NODShiLtJ_G0019771.1 mouse_genomes_project 12 93149910 93179268 + MGP_NODShiLtJ_P0035089 Papln protein_coding protein_coding MGP_NODShiLtJ_T0035090.1 MGP_NODShiLtJ_G0019771.1 mouse_genomes_project 12 93149930 93179241 + MGP_NODShiLtJ_P0035090 Papln protein_coding protein_coding MGP_NODShiLtJ_T0035091.1 MGP_NODShiLtJ_G0019771.1 mouse_genomes_project 12 93149938 93168016 + Papln protein_coding retained_intron MGP_NODShiLtJ_T0009762.1 MGP_NODShiLtJ_G0007895.1 mouse_genomes_project 12 123061696 123061759 + Mir299a miRNA miRNA MGP_NODShiLtJ_T0000256.1 MGP_NODShiLtJ_G0000194.1 mouse_genomes_project 12 128716677 128716976 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035169.1 MGP_NODShiLtJ_G0019795.1 mouse_genomes_project 12 94073294 94091268 - MGP_NODShiLtJ_P0035169 Abcd4 protein_coding protein_coding MGP_NODShiLtJ_T0035162.1 MGP_NODShiLtJ_G0019791.1 mouse_genomes_project 12 93867620 93869003 + MGP_NODShiLtJ_P0035162 Rnf113a2 protein_coding protein_coding MGP_NODShiLtJ_T0101594.1 MGP_NODShiLtJ_G0039763.1 mouse_genomes_project 12 127127940 127129146 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0035816.1 MGP_NODShiLtJ_G0020004.1 mouse_genomes_project 12 126264234 126285590 + MGP_NODShiLtJ_P0035816 Adssl1 protein_coding protein_coding MGP_NODShiLtJ_T0035817.1 MGP_NODShiLtJ_G0020004.1 mouse_genomes_project 12 126264236 126285605 + MGP_NODShiLtJ_P0035817 Adssl1 protein_coding protein_coding MGP_NODShiLtJ_T0000251.1 MGP_NODShiLtJ_G0000189.1 mouse_genomes_project 12 128451826 128452117 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0009689.1 MGP_NODShiLtJ_G0007822.1 mouse_genomes_project 12 9225190 9225248 + Mir7675 miRNA miRNA MGP_NODShiLtJ_T0035223.1 MGP_NODShiLtJ_G0019813.1 mouse_genomes_project 12 94810017 94852037 - MGP_NODShiLtJ_P0035223 Nek9 protein_coding protein_coding MGP_NODShiLtJ_T0012690.1 MGP_NODShiLtJ_G0010798.1 mouse_genomes_project 12 61700450 61700916 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006333.1 MGP_NODShiLtJ_G0005277.1 mouse_genomes_project 12 26269149 26288817 - Gm9866 lincRNA lincRNA MGP_NODShiLtJ_T0006334.1 MGP_NODShiLtJ_G0005277.1 mouse_genomes_project 12 26269155 26289139 - Gm9866 lincRNA lincRNA MGP_NODShiLtJ_T0006335.1 MGP_NODShiLtJ_G0005277.1 mouse_genomes_project 12 26270251 26288952 - Gm9866 lincRNA lincRNA MGP_NODShiLtJ_T0006336.1 MGP_NODShiLtJ_G0005277.1 mouse_genomes_project 12 26273770 26288968 - Gm9866 lincRNA lincRNA MGP_NODShiLtJ_T0035551.1 MGP_NODShiLtJ_G0019910.1 mouse_genomes_project 12 116076126 116086864 - MGP_NODShiLtJ_P0035551 Serpina10 protein_coding protein_coding MGP_NODShiLtJ_T0035552.1 MGP_NODShiLtJ_G0019910.1 mouse_genomes_project 12 116077921 116086841 - MGP_NODShiLtJ_P0035552 Serpina10 protein_coding protein_coding MGP_NODShiLtJ_T0035275.1 MGP_NODShiLtJ_G0019827.1 mouse_genomes_project 12 96338338 96370555 + MGP_NODShiLtJ_P0035275 Lrrc74a protein_coding protein_coding MGP_NODShiLtJ_T0000006.1 MGP_NODShiLtJ_G0000004.1 mouse_genomes_project 12 127007664 127011480 - MGP_NODShiLtJ_P0000006 Ighe IG_C_gene IG_C_gene MGP_NODShiLtJ_T0035784.1 MGP_NODShiLtJ_G0019992.1 mouse_genomes_project 12 125372564 125384403 - MGP_NODShiLtJ_P0035784 Xrcc3 protein_coding protein_coding MGP_NODShiLtJ_T0035785.1 MGP_NODShiLtJ_G0019992.1 mouse_genomes_project 12 125372564 125381554 - MGP_NODShiLtJ_P0035785 Xrcc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035786.1 MGP_NODShiLtJ_G0019992.1 mouse_genomes_project 12 125374273 125381554 - Xrcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0035787.1 MGP_NODShiLtJ_G0019992.1 mouse_genomes_project 12 125374339 125379335 - Xrcc3 protein_coding retained_intron MGP_NODShiLtJ_T0035788.1 MGP_NODShiLtJ_G0019992.1 mouse_genomes_project 12 125374434 125384435 - Xrcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0035790.1 MGP_NODShiLtJ_G0019992.1 mouse_genomes_project 12 125379118 125381574 - Xrcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0035791.1 MGP_NODShiLtJ_G0019992.1 mouse_genomes_project 12 125379253 125384414 - Xrcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0035792.1 MGP_NODShiLtJ_G0019992.1 mouse_genomes_project 12 125380856 125381574 - Xrcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0100036.1 MGP_NODShiLtJ_G0038430.1 mouse_genomes_project 12 123033671 123033744 + Gm23787 snoRNA snoRNA MGP_NODShiLtJ_T0035872.1 MGP_NODShiLtJ_G0020024.1 mouse_genomes_project 12 126853690 126861814 + MGP_NODShiLtJ_P0035872 4930427A07Rik protein_coding protein_coding MGP_NODShiLtJ_T0035873.1 MGP_NODShiLtJ_G0020024.1 mouse_genomes_project 12 126853699 126854196 + 4930427A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0035874.1 MGP_NODShiLtJ_G0020024.1 mouse_genomes_project 12 126853709 126863308 + MGP_NODShiLtJ_P0035874 4930427A07Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035875.1 MGP_NODShiLtJ_G0020024.1 mouse_genomes_project 12 126853725 126854859 + 4930427A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0035876.1 MGP_NODShiLtJ_G0020024.1 mouse_genomes_project 12 126853775 126859085 + MGP_NODShiLtJ_P0035876 4930427A07Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035877.1 MGP_NODShiLtJ_G0020024.1 mouse_genomes_project 12 126854840 126861817 + 4930427A07Rik protein_coding retained_intron MGP_NODShiLtJ_T0000096.1 MGP_NODShiLtJ_G0000073.1 mouse_genomes_project 12 128483449 128483883 - MGP_NODShiLtJ_P0000096 Ighv12-3 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0011212.1 MGP_NODShiLtJ_G0009345.1 mouse_genomes_project 12 31942810 31943128 - Gm23875 misc_RNA misc_RNA MGP_NODShiLtJ_T0009727.1 MGP_NODShiLtJ_G0007860.1 mouse_genomes_project 12 112051658 112051736 - Gm23291 miRNA miRNA MGP_NODShiLtJ_T0035239.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366298 95401241 + MGP_NODShiLtJ_P0035239 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035240.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366312 95437596 + MGP_NODShiLtJ_P0035240 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035241.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366346 95427293 + MGP_NODShiLtJ_P0035241 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035242.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366349 95600696 + MGP_NODShiLtJ_P0035242 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035243.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366607 95561988 + MGP_NODShiLtJ_P0035243 Ttll5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035244.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366608 95600144 + MGP_NODShiLtJ_P0035244 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035245.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366617 95413082 + Ttll5 protein_coding processed_transcript MGP_NODShiLtJ_T0035246.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366617 95600695 + MGP_NODShiLtJ_P0035246 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035247.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366624 95385804 + MGP_NODShiLtJ_P0035247 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035248.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366660 95387699 + Ttll5 protein_coding retained_intron MGP_NODShiLtJ_T0035249.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366660 95391334 + MGP_NODShiLtJ_P0035249 Ttll5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035250.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95366714 95600695 + MGP_NODShiLtJ_P0035250 Ttll5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035251.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95368123 95600145 + MGP_NODShiLtJ_P0035251 Ttll5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035252.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95421875 95435050 + Ttll5 protein_coding retained_intron MGP_NODShiLtJ_T0035253.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95455324 95473889 + MGP_NODShiLtJ_P0035253 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035254.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95460543 95600695 + MGP_NODShiLtJ_P0035254 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035255.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95466957 95558736 + MGP_NODShiLtJ_P0035255 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035256.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95477308 95600695 + MGP_NODShiLtJ_P0035256 Ttll5 protein_coding protein_coding MGP_NODShiLtJ_T0035257.1 MGP_NODShiLtJ_G0019820.1 mouse_genomes_project 12 95484893 95608251 + MGP_NODShiLtJ_P0035257 Ttll5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034548.1 MGP_NODShiLtJ_G0019573.1 mouse_genomes_project 12 52697805 52707344 + MGP_NODShiLtJ_P0034548 Gm43517 protein_coding protein_coding MGP_NODShiLtJ_T0000138.1 MGP_NODShiLtJ_G0000102.1 mouse_genomes_project 12 130322612 130322913 - MGP_NODShiLtJ_P0000138 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000142.1 MGP_NODShiLtJ_G0000102.1 mouse_genomes_project 12 130322616 130323055 - MGP_NODShiLtJ_P0000142 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0098786.1 MGP_NODShiLtJ_G0037180.1 mouse_genomes_project 12 126913577 126913681 + Gm25622 snRNA snRNA MGP_NODShiLtJ_T0009730.1 MGP_NODShiLtJ_G0007863.1 mouse_genomes_project 12 115367046 115367181 + Gm44324 miRNA miRNA MGP_NODShiLtJ_T0003332.1 MGP_NODShiLtJ_G0003058.1 mouse_genomes_project 12 659188 669551 - Dtnbos antisense antisense MGP_NODShiLtJ_T0034551.1 MGP_NODShiLtJ_G0019576.1 mouse_genomes_project 12 55101159 55132896 + MGP_NODShiLtJ_P0034551 G2e3 protein_coding protein_coding MGP_NODShiLtJ_T0034552.1 MGP_NODShiLtJ_G0019576.1 mouse_genomes_project 12 55101386 55127978 + MGP_NODShiLtJ_P0034552 G2e3 protein_coding protein_coding MGP_NODShiLtJ_T0034553.1 MGP_NODShiLtJ_G0019576.1 mouse_genomes_project 12 55101470 55128081 + MGP_NODShiLtJ_P0034553 G2e3 protein_coding protein_coding MGP_NODShiLtJ_T0034554.1 MGP_NODShiLtJ_G0019576.1 mouse_genomes_project 12 55111247 55117671 + G2e3 protein_coding retained_intron MGP_NODShiLtJ_T0034555.1 MGP_NODShiLtJ_G0019576.1 mouse_genomes_project 12 55125368 55129987 + G2e3 protein_coding retained_intron MGP_NODShiLtJ_T0035765.1 MGP_NODShiLtJ_G0019988.1 mouse_genomes_project 12 125230658 125238170 + MGP_NODShiLtJ_P0035765 Trmt61a protein_coding protein_coding MGP_NODShiLtJ_T0035766.1 MGP_NODShiLtJ_G0019988.1 mouse_genomes_project 12 125230658 125238170 + MGP_NODShiLtJ_P0035766 Trmt61a protein_coding protein_coding MGP_NODShiLtJ_T0034403.1 MGP_NODShiLtJ_G0019522.1 mouse_genomes_project 12 31104946 31147788 - MGP_NODShiLtJ_P0034403 Bcap29 protein_coding protein_coding MGP_NODShiLtJ_T0034404.1 MGP_NODShiLtJ_G0019522.1 mouse_genomes_project 12 31104946 31147727 - MGP_NODShiLtJ_P0034404 Bcap29 protein_coding protein_coding MGP_NODShiLtJ_T0034499.1 MGP_NODShiLtJ_G0019557.1 mouse_genomes_project 12 41051950 41083714 - MGP_NODShiLtJ_P0034499 Arl4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034500.1 MGP_NODShiLtJ_G0019557.1 mouse_genomes_project 12 41051950 41083723 - MGP_NODShiLtJ_P0034500 Arl4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034501.1 MGP_NODShiLtJ_G0019557.1 mouse_genomes_project 12 41056001 41060854 - Arl4a protein_coding processed_transcript MGP_NODShiLtJ_T0034502.1 MGP_NODShiLtJ_G0019557.1 mouse_genomes_project 12 41079639 41083776 - MGP_NODShiLtJ_P0034502 Arl4a protein_coding protein_coding MGP_NODShiLtJ_T0034503.1 MGP_NODShiLtJ_G0019557.1 mouse_genomes_project 12 41082170 41084372 - MGP_NODShiLtJ_P0034503 Arl4a protein_coding protein_coding MGP_NODShiLtJ_T0000242.1 MGP_NODShiLtJ_G0000180.1 mouse_genomes_project 12 127920223 127920816 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034637.1 MGP_NODShiLtJ_G0019616.1 mouse_genomes_project 12 62029714 62035199 - MGP_NODShiLtJ_P0034637 Foxa1 protein_coding protein_coding MGP_NODShiLtJ_T0034583.1 MGP_NODShiLtJ_G0019593.1 mouse_genomes_project 12 58979746 58983802 - MGP_NODShiLtJ_P0034583 Cfl2 protein_coding protein_coding MGP_NODShiLtJ_T0006321.1 MGP_NODShiLtJ_G0005266.1 mouse_genomes_project 12 168711 194536 - lincRNA lincRNA MGP_NODShiLtJ_T0009748.1 MGP_NODShiLtJ_G0007881.1 mouse_genomes_project 12 122934468 122934559 + Mir431 miRNA miRNA MGP_NODShiLtJ_T0012691.1 MGP_NODShiLtJ_G0010799.1 mouse_genomes_project 12 62007473 62009057 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000135.1 MGP_NODShiLtJ_G0000100.1 mouse_genomes_project 12 130278314 130278608 - MGP_NODShiLtJ_P0000135 Ighv1-67 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000136.1 MGP_NODShiLtJ_G0000100.1 mouse_genomes_project 12 130278314 130278751 - MGP_NODShiLtJ_P0000136 Ighv1-67 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0100031.1 MGP_NODShiLtJ_G0038425.1 mouse_genomes_project 12 123028629 123028698 + AF357428 snoRNA snoRNA MGP_NODShiLtJ_T0035216.1 MGP_NODShiLtJ_G0019810.1 mouse_genomes_project 12 94745521 94782124 - MGP_NODShiLtJ_P0035216 Mlh3 protein_coding protein_coding MGP_NODShiLtJ_T0035217.1 MGP_NODShiLtJ_G0019810.1 mouse_genomes_project 12 94745521 94782097 - MGP_NODShiLtJ_P0035217 Mlh3 protein_coding protein_coding MGP_NODShiLtJ_T0035708.1 MGP_NODShiLtJ_G0019969.1 mouse_genomes_project 12 124124909 124129069 - Hsp90aa1 protein_coding retained_intron MGP_NODShiLtJ_T0035709.1 MGP_NODShiLtJ_G0019969.1 mouse_genomes_project 12 124126473 124132178 - MGP_NODShiLtJ_P0035709 Hsp90aa1 protein_coding protein_coding MGP_NODShiLtJ_T0035710.1 MGP_NODShiLtJ_G0019969.1 mouse_genomes_project 12 124129548 124130181 - Hsp90aa1 protein_coding retained_intron MGP_NODShiLtJ_T0035711.1 MGP_NODShiLtJ_G0019969.1 mouse_genomes_project 12 124130063 124131561 - Hsp90aa1 protein_coding retained_intron MGP_NODShiLtJ_T0035712.1 MGP_NODShiLtJ_G0019969.1 mouse_genomes_project 12 124130517 124139317 - MGP_NODShiLtJ_P0035712 Hsp90aa1 protein_coding protein_coding MGP_NODShiLtJ_T0035713.1 MGP_NODShiLtJ_G0019969.1 mouse_genomes_project 12 124131158 124132147 - MGP_NODShiLtJ_P0035713 Hsp90aa1 protein_coding protein_coding MGP_NODShiLtJ_T0035714.1 MGP_NODShiLtJ_G0019969.1 mouse_genomes_project 12 124131174 124131840 - MGP_NODShiLtJ_P0035714 Hsp90aa1 protein_coding protein_coding MGP_NODShiLtJ_T0035905.1 MGP_NODShiLtJ_G0020034.1 mouse_genomes_project 12 132765044 132960278 - MGP_NODShiLtJ_P0035905 Dnah11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035906.1 MGP_NODShiLtJ_G0020034.1 mouse_genomes_project 12 132765044 133119899 - MGP_NODShiLtJ_P0035906 Dnah11 protein_coding protein_coding MGP_NODShiLtJ_T0035907.1 MGP_NODShiLtJ_G0020034.1 mouse_genomes_project 12 132789179 132802681 - Dnah11 protein_coding retained_intron MGP_NODShiLtJ_T0035908.1 MGP_NODShiLtJ_G0020034.1 mouse_genomes_project 12 132789195 132802910 - Dnah11 protein_coding processed_transcript MGP_NODShiLtJ_T0011219.1 MGP_NODShiLtJ_G0009352.1 mouse_genomes_project 12 77849693 77850003 + Gm22058 misc_RNA misc_RNA MGP_NODShiLtJ_T0000004.1 MGP_NODShiLtJ_G0000003.1 mouse_genomes_project 12 126987798 126993202 - MGP_NODShiLtJ_P0000004 Igha IG_C_gene IG_C_gene MGP_NODShiLtJ_T0000005.1 MGP_NODShiLtJ_G0000003.1 mouse_genomes_project 12 126991667 126993202 - MGP_NODShiLtJ_P0000005 Igha IG_C_gene IG_C_gene MGP_NODShiLtJ_T0100029.1 MGP_NODShiLtJ_G0038423.1 mouse_genomes_project 12 123006627 123006700 + Gm27604 snoRNA snoRNA MGP_NODShiLtJ_T0000245.1 MGP_NODShiLtJ_G0000183.1 mouse_genomes_project 12 128119688 128119983 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0012693.1 MGP_NODShiLtJ_G0010801.1 mouse_genomes_project 12 64033801 64034776 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035866.1 MGP_NODShiLtJ_G0020023.1 mouse_genomes_project 12 126842311 126851149 + Crip1 protein_coding processed_transcript MGP_NODShiLtJ_T0035867.1 MGP_NODShiLtJ_G0020023.1 mouse_genomes_project 12 126845976 126851116 + MGP_NODShiLtJ_P0035867 Crip1 protein_coding protein_coding MGP_NODShiLtJ_T0035868.1 MGP_NODShiLtJ_G0020023.1 mouse_genomes_project 12 126849281 126851147 + MGP_NODShiLtJ_P0035868 Crip1 protein_coding protein_coding MGP_NODShiLtJ_T0035869.1 MGP_NODShiLtJ_G0020023.1 mouse_genomes_project 12 126849322 126851149 + MGP_NODShiLtJ_P0035869 Crip1 protein_coding protein_coding MGP_NODShiLtJ_T0035870.1 MGP_NODShiLtJ_G0020023.1 mouse_genomes_project 12 126849340 126851149 + Crip1 protein_coding retained_intron MGP_NODShiLtJ_T0035871.1 MGP_NODShiLtJ_G0020023.1 mouse_genomes_project 12 126849350 126851149 + Crip1 protein_coding retained_intron MGP_NODShiLtJ_T0035606.1 MGP_NODShiLtJ_G0019939.1 mouse_genomes_project 12 118429225 118471072 + MGP_NODShiLtJ_P0035606 D430019H16Rik protein_coding protein_coding MGP_NODShiLtJ_T0034145.1 MGP_NODShiLtJ_G0019422.1 mouse_genomes_project 12 1185281 1191950 + MGP_NODShiLtJ_P0034145 Ptrhd1 protein_coding protein_coding MGP_NODShiLtJ_T0035406.1 MGP_NODShiLtJ_G0019866.1 mouse_genomes_project 12 110749958 110889099 - MGP_NODShiLtJ_P0035406 Eml5 protein_coding protein_coding MGP_NODShiLtJ_T0035407.1 MGP_NODShiLtJ_G0019866.1 mouse_genomes_project 12 110766986 110888645 - MGP_NODShiLtJ_P0035407 Eml5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034452.1 MGP_NODShiLtJ_G0019538.1 mouse_genomes_project 12 34195432 34382395 - MGP_NODShiLtJ_P0034452 Hdac9 protein_coding protein_coding MGP_NODShiLtJ_T0034453.1 MGP_NODShiLtJ_G0019538.1 mouse_genomes_project 12 34198898 34382334 - MGP_NODShiLtJ_P0034453 Hdac9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097917.1 MGP_NODShiLtJ_G0036329.1 mouse_genomes_project 12 91400246 91400342 + n-R5s62 rRNA rRNA MGP_NODShiLtJ_T0000115.1 MGP_NODShiLtJ_G0000087.1 mouse_genomes_project 12 128801355 128801788 - MGP_NODShiLtJ_P0000115 Ighv1-11 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0009704.1 MGP_NODShiLtJ_G0007837.1 mouse_genomes_project 12 58714566 58714646 - Mir1892 miRNA miRNA MGP_NODShiLtJ_T0035424.1 MGP_NODShiLtJ_G0019870.1 mouse_genomes_project 12 111948799 112002690 + protein_coding retained_intron MGP_NODShiLtJ_T0035425.1 MGP_NODShiLtJ_G0019870.1 mouse_genomes_project 12 111948816 111952042 + protein_coding processed_transcript MGP_NODShiLtJ_T0035426.1 MGP_NODShiLtJ_G0019870.1 mouse_genomes_project 12 111948886 112021448 + MGP_NODShiLtJ_P0035426 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035427.1 MGP_NODShiLtJ_G0019870.1 mouse_genomes_project 12 111950838 111955501 + MGP_NODShiLtJ_P0035427 protein_coding protein_coding MGP_NODShiLtJ_T0035428.1 MGP_NODShiLtJ_G0019870.1 mouse_genomes_project 12 111976702 111977634 + protein_coding retained_intron MGP_NODShiLtJ_T0035429.1 MGP_NODShiLtJ_G0019870.1 mouse_genomes_project 12 111979060 112021444 + protein_coding retained_intron MGP_NODShiLtJ_T0035651.1 MGP_NODShiLtJ_G0019953.1 mouse_genomes_project 12 121574866 121606997 + MGP_NODShiLtJ_P0035651 Cyp46a1 protein_coding protein_coding MGP_NODShiLtJ_T0100026.1 MGP_NODShiLtJ_G0038420.1 mouse_genomes_project 12 123002000 123002072 + Gm26922 snoRNA snoRNA MGP_NODShiLtJ_T0099973.1 MGP_NODShiLtJ_G0038367.1 mouse_genomes_project 12 10033866 10033995 + Gm25610 snoRNA snoRNA MGP_NODShiLtJ_T0034469.1 MGP_NODShiLtJ_G0019547.1 mouse_genomes_project 12 36121128 36195289 - MGP_NODShiLtJ_P0034469 Bzw2 protein_coding protein_coding MGP_NODShiLtJ_T0006348.1 MGP_NODShiLtJ_G0005287.1 mouse_genomes_project 12 52800771 52807062 - lincRNA lincRNA MGP_NODShiLtJ_T0035087.1 MGP_NODShiLtJ_G0019770.1 mouse_genomes_project 12 93068681 93118102 + MGP_NODShiLtJ_P0035087 Psen1 protein_coding protein_coding MGP_NODShiLtJ_T0035088.1 MGP_NODShiLtJ_G0019770.1 mouse_genomes_project 12 93069041 93119188 + MGP_NODShiLtJ_P0035088 Psen1 protein_coding protein_coding MGP_NODShiLtJ_T0012739.1 MGP_NODShiLtJ_G0010847.1 mouse_genomes_project 12 127743702 127744137 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006365.1 MGP_NODShiLtJ_G0005298.1 mouse_genomes_project 12 89090419 89102672 - 2310015A10Rik lincRNA lincRNA MGP_NODShiLtJ_T0009738.1 MGP_NODShiLtJ_G0007871.1 mouse_genomes_project 12 122877967 122878047 + Mir1906-2 miRNA miRNA MGP_NODShiLtJ_T0000026.1 MGP_NODShiLtJ_G0000020.1 mouse_genomes_project 12 127210791 127210807 - MGP_NODShiLtJ_P0000026 Ighd3-2 IG_D_gene IG_D_gene MGP_NODShiLtJ_T0011225.1 MGP_NODShiLtJ_G0009358.1 mouse_genomes_project 12 101156067 101156390 + Gm26477 misc_RNA misc_RNA MGP_NODShiLtJ_T0034866.1 MGP_NODShiLtJ_G0019699.1 mouse_genomes_project 12 82603876 82605101 - MGP_NODShiLtJ_P0034866 Gm11042 protein_coding protein_coding MGP_NODShiLtJ_T0034973.1 MGP_NODShiLtJ_G0019741.1 mouse_genomes_project 12 89331335 89435130 - MGP_NODShiLtJ_P0034973 Dcaf5 protein_coding protein_coding MGP_NODShiLtJ_T0035909.1 MGP_NODShiLtJ_G0020035.1 mouse_genomes_project 12 133159792 133231633 - MGP_NODShiLtJ_P0035909 Sp4 protein_coding protein_coding MGP_NODShiLtJ_T0035841.1 MGP_NODShiLtJ_G0020013.1 mouse_genomes_project 12 126526481 126538682 - MGP_NODShiLtJ_P0035841 Gpr132 protein_coding protein_coding MGP_NODShiLtJ_T0034760.1 MGP_NODShiLtJ_G0019662.1 mouse_genomes_project 12 78081800 78111752 + Abhd12b protein_coding retained_intron MGP_NODShiLtJ_T0034761.1 MGP_NODShiLtJ_G0019662.1 mouse_genomes_project 12 78081815 78116769 + MGP_NODShiLtJ_P0034761 Abhd12b protein_coding protein_coding MGP_NODShiLtJ_T0034762.1 MGP_NODShiLtJ_G0019662.1 mouse_genomes_project 12 78081815 78116769 + MGP_NODShiLtJ_P0034762 Abhd12b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034763.1 MGP_NODShiLtJ_G0019662.1 mouse_genomes_project 12 78081815 78116769 + MGP_NODShiLtJ_P0034763 Abhd12b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034764.1 MGP_NODShiLtJ_G0019662.1 mouse_genomes_project 12 78081815 78116769 + MGP_NODShiLtJ_P0034764 Abhd12b protein_coding protein_coding MGP_NODShiLtJ_T0034765.1 MGP_NODShiLtJ_G0019662.1 mouse_genomes_project 12 78110452 78111752 + Abhd12b protein_coding retained_intron MGP_NODShiLtJ_T0000842.1 MGP_NODShiLtJ_G0000772.1 mouse_genomes_project 12 92432489 92433291 - TEC TEC MGP_NODShiLtJ_T0100025.1 MGP_NODShiLtJ_G0038419.1 mouse_genomes_project 12 123000416 123000488 + Gm23508 snoRNA snoRNA MGP_NODShiLtJ_T0035767.1 MGP_NODShiLtJ_G0019989.1 mouse_genomes_project 12 125266535 125270284 - MGP_NODShiLtJ_P0035767 Bag5 protein_coding protein_coding MGP_NODShiLtJ_T0035768.1 MGP_NODShiLtJ_G0019989.1 mouse_genomes_project 12 125266934 125269954 - MGP_NODShiLtJ_P0035768 Bag5 protein_coding protein_coding MGP_NODShiLtJ_T0035769.1 MGP_NODShiLtJ_G0019989.1 mouse_genomes_project 12 125268239 125269980 - MGP_NODShiLtJ_P0035769 Bag5 protein_coding protein_coding MGP_NODShiLtJ_T0035770.1 MGP_NODShiLtJ_G0019989.1 mouse_genomes_project 12 125268305 125269980 - MGP_NODShiLtJ_P0035770 Bag5 protein_coding protein_coding MGP_NODShiLtJ_T0009788.1 MGP_NODShiLtJ_G0007921.1 mouse_genomes_project 12 123080327 123080405 + Mir544 miRNA miRNA MGP_NODShiLtJ_T0034779.1 MGP_NODShiLtJ_G0019668.1 mouse_genomes_project 12 78965909 78987006 + Psma3 protein_coding retained_intron MGP_NODShiLtJ_T0034780.1 MGP_NODShiLtJ_G0019668.1 mouse_genomes_project 12 78965909 78987426 + MGP_NODShiLtJ_P0034780 Psma3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034781.1 MGP_NODShiLtJ_G0019668.1 mouse_genomes_project 12 78965931 78987009 + MGP_NODShiLtJ_P0034781 Psma3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034782.1 MGP_NODShiLtJ_G0019668.1 mouse_genomes_project 12 78965946 78970793 + Psma3 protein_coding retained_intron MGP_NODShiLtJ_T0034783.1 MGP_NODShiLtJ_G0019668.1 mouse_genomes_project 12 78965953 78986980 + MGP_NODShiLtJ_P0034783 Psma3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034784.1 MGP_NODShiLtJ_G0019668.1 mouse_genomes_project 12 78965957 78975936 + Psma3 protein_coding retained_intron MGP_NODShiLtJ_T0034785.1 MGP_NODShiLtJ_G0019668.1 mouse_genomes_project 12 78965985 78986900 + MGP_NODShiLtJ_P0034785 Psma3 protein_coding protein_coding MGP_NODShiLtJ_T0034786.1 MGP_NODShiLtJ_G0019668.1 mouse_genomes_project 12 78977990 78987010 + MGP_NODShiLtJ_P0034786 Psma3 protein_coding protein_coding MGP_NODShiLtJ_T0098756.1 MGP_NODShiLtJ_G0037150.1 mouse_genomes_project 12 58769196 58769630 + Gm22513 snRNA snRNA MGP_NODShiLtJ_T0035663.1 MGP_NODShiLtJ_G0019956.1 mouse_genomes_project 12 121947201 121963862 - MGP_NODShiLtJ_P0035663 Degs2 protein_coding protein_coding MGP_NODShiLtJ_T0035664.1 MGP_NODShiLtJ_G0019956.1 mouse_genomes_project 12 121950629 121963862 - MGP_NODShiLtJ_P0035664 Degs2 protein_coding protein_coding MGP_NODShiLtJ_T0000843.1 MGP_NODShiLtJ_G0000773.1 mouse_genomes_project 12 92433388 92434330 + TEC TEC MGP_NODShiLtJ_T0006366.1 MGP_NODShiLtJ_G0005299.1 mouse_genomes_project 12 89518455 89527613 - Gm26777 lincRNA lincRNA MGP_NODShiLtJ_T0034181.1 MGP_NODShiLtJ_G0019442.1 mouse_genomes_project 12 6073844 6083835 - MGP_NODShiLtJ_P0034181 Slc7a15 protein_coding protein_coding MGP_NODShiLtJ_T0034182.1 MGP_NODShiLtJ_G0019442.1 mouse_genomes_project 12 6082490 6083856 - Slc7a15 protein_coding processed_transcript MGP_NODShiLtJ_T0000119.1 MGP_NODShiLtJ_G0000089.1 mouse_genomes_project 12 128863889 128864323 - MGP_NODShiLtJ_P0000119 Ighv1-15 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0009769.1 MGP_NODShiLtJ_G0007902.1 mouse_genomes_project 12 123064539 123064636 + Mir329 miRNA miRNA MGP_NODShiLtJ_T0101589.1 MGP_NODShiLtJ_G0039758.1 mouse_genomes_project 12 116332901 116467654 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0034830.1 MGP_NODShiLtJ_G0019685.1 mouse_genomes_project 12 81020537 81068445 - MGP_NODShiLtJ_P0034830 protein_coding protein_coding MGP_NODShiLtJ_T0034831.1 MGP_NODShiLtJ_G0019685.1 mouse_genomes_project 12 81054891 81068396 - MGP_NODShiLtJ_P0034831 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034832.1 MGP_NODShiLtJ_G0019685.1 mouse_genomes_project 12 81058811 81068337 - MGP_NODShiLtJ_P0034832 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034833.1 MGP_NODShiLtJ_G0019685.1 mouse_genomes_project 12 81061629 81093255 - MGP_NODShiLtJ_P0034833 protein_coding protein_coding MGP_NODShiLtJ_T0034834.1 MGP_NODShiLtJ_G0019685.1 mouse_genomes_project 12 81063158 81089409 - MGP_NODShiLtJ_P0034834 protein_coding protein_coding MGP_NODShiLtJ_T0034835.1 MGP_NODShiLtJ_G0019685.1 mouse_genomes_project 12 81063162 81092564 - MGP_NODShiLtJ_P0034835 protein_coding protein_coding MGP_NODShiLtJ_T0017184.1 MGP_NODShiLtJ_G0015106.1 mouse_genomes_project 12 111314758 111318771 - Gm20682 processed_transcript processed_transcript MGP_NODShiLtJ_T0098778.1 MGP_NODShiLtJ_G0037172.1 mouse_genomes_project 12 89948128 89948235 + Gm23298 snRNA snRNA MGP_NODShiLtJ_T0034729.1 MGP_NODShiLtJ_G0019650.1 mouse_genomes_project 12 77234785 77235409 - MGP_NODShiLtJ_P0034729 Gm9887 protein_coding protein_coding MGP_NODShiLtJ_T0035583.1 MGP_NODShiLtJ_G0019923.1 mouse_genomes_project 12 117041792 117047973 + MGP_NODShiLtJ_P0035583 Serpina3j protein_coding protein_coding MGP_NODShiLtJ_T0003360.1 MGP_NODShiLtJ_G0003082.1 mouse_genomes_project 12 92993857 92995822 - Gm29361 antisense antisense MGP_NODShiLtJ_T0034224.1 MGP_NODShiLtJ_G0019457.1 mouse_genomes_project 12 9393272 9418118 + MGP_NODShiLtJ_P0034224 Rad51ap2 protein_coding protein_coding MGP_NODShiLtJ_T0101591.1 MGP_NODShiLtJ_G0039760.1 mouse_genomes_project 12 116772928 116777924 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0034128.1 MGP_NODShiLtJ_G0019418.1 mouse_genomes_project 12 882471 971456 - MGP_NODShiLtJ_P0034128 Efr3b protein_coding protein_coding MGP_NODShiLtJ_T0035892.1 MGP_NODShiLtJ_G0020028.1 mouse_genomes_project 12 131003124 131061273 - MGP_NODShiLtJ_P0035892 Wdr60 protein_coding protein_coding MGP_NODShiLtJ_T0000080.1 MGP_NODShiLtJ_G0000064.1 mouse_genomes_project 12 128255338 128255768 - MGP_NODShiLtJ_P0000080 Ighv14-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000081.1 MGP_NODShiLtJ_G0000064.1 mouse_genomes_project 12 128255344 128255763 - MGP_NODShiLtJ_P0000081 Ighv14-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034170.1 MGP_NODShiLtJ_G0019435.1 mouse_genomes_project 12 1937777 2078767 + MGP_NODShiLtJ_P0034170 Atad2b protein_coding protein_coding MGP_NODShiLtJ_T0034171.1 MGP_NODShiLtJ_G0019435.1 mouse_genomes_project 12 1938082 2082122 + MGP_NODShiLtJ_P0034171 Atad2b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098779.1 MGP_NODShiLtJ_G0037173.1 mouse_genomes_project 12 96253360 96253467 + Gm22004 snRNA snRNA MGP_NODShiLtJ_T0035679.1 MGP_NODShiLtJ_G0019962.1 mouse_genomes_project 12 122324082 122345776 - MGP_NODShiLtJ_P0035679 Begain protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035680.1 MGP_NODShiLtJ_G0019962.1 mouse_genomes_project 12 122324092 122362973 - MGP_NODShiLtJ_P0035680 Begain protein_coding protein_coding MGP_NODShiLtJ_T0035681.1 MGP_NODShiLtJ_G0019962.1 mouse_genomes_project 12 122326521 122328998 - Begain protein_coding retained_intron MGP_NODShiLtJ_T0035682.1 MGP_NODShiLtJ_G0019962.1 mouse_genomes_project 12 122329598 122345628 - Begain protein_coding processed_transcript MGP_NODShiLtJ_T0035338.1 MGP_NODShiLtJ_G0019850.1 mouse_genomes_project 12 98141574 98254636 + MGP_NODShiLtJ_P0035338 Adck1 protein_coding protein_coding MGP_NODShiLtJ_T0035339.1 MGP_NODShiLtJ_G0019850.1 mouse_genomes_project 12 98141821 98254635 + MGP_NODShiLtJ_P0035339 Adck1 protein_coding protein_coding MGP_NODShiLtJ_T0012710.1 MGP_NODShiLtJ_G0010818.1 mouse_genomes_project 12 91820183 91820426 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035299.1 MGP_NODShiLtJ_G0019835.1 mouse_genomes_project 12 96872918 96883101 + Samd15 protein_coding processed_transcript MGP_NODShiLtJ_T0035300.1 MGP_NODShiLtJ_G0019835.1 mouse_genomes_project 12 96873894 96887424 + MGP_NODShiLtJ_P0035300 Samd15 protein_coding protein_coding MGP_NODShiLtJ_T0035301.1 MGP_NODShiLtJ_G0019835.1 mouse_genomes_project 12 96874101 96875295 + MGP_NODShiLtJ_P0035301 Samd15 protein_coding protein_coding MGP_NODShiLtJ_T0034755.1 MGP_NODShiLtJ_G0019660.1 mouse_genomes_project 12 77884077 77906029 - MGP_NODShiLtJ_P0034755 Sav1 protein_coding protein_coding MGP_NODShiLtJ_T0006344.1 MGP_NODShiLtJ_G0005284.1 mouse_genomes_project 12 32762594 32790653 + Gm16267 lincRNA lincRNA MGP_NODShiLtJ_T0000122.1 MGP_NODShiLtJ_G0000092.1 mouse_genomes_project 12 129050591 129051025 - MGP_NODShiLtJ_P0000122 Ighv1-24 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034712.1 MGP_NODShiLtJ_G0019641.1 mouse_genomes_project 12 77001319 77013134 + MGP_NODShiLtJ_P0034712 Lrr1 protein_coding protein_coding MGP_NODShiLtJ_T0101588.1 MGP_NODShiLtJ_G0039757.1 mouse_genomes_project 12 116332901 116467654 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000263.1 MGP_NODShiLtJ_G0000201.1 mouse_genomes_project 12 129206063 129422512 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0097923.1 MGP_NODShiLtJ_G0036335.1 mouse_genomes_project 12 118635928 118636057 + Gm22790 rRNA rRNA MGP_NODShiLtJ_T0035444.1 MGP_NODShiLtJ_G0019877.1 mouse_genomes_project 12 112913121 113014367 + MGP_NODShiLtJ_P0035444 9030617O03Rik protein_coding protein_coding MGP_NODShiLtJ_T0035445.1 MGP_NODShiLtJ_G0019877.1 mouse_genomes_project 12 112913142 113014111 + MGP_NODShiLtJ_P0035445 9030617O03Rik protein_coding protein_coding MGP_NODShiLtJ_T0035446.1 MGP_NODShiLtJ_G0019877.1 mouse_genomes_project 12 112913150 113041669 + MGP_NODShiLtJ_P0035446 9030617O03Rik protein_coding protein_coding MGP_NODShiLtJ_T0035447.1 MGP_NODShiLtJ_G0019877.1 mouse_genomes_project 12 112913159 113014111 + MGP_NODShiLtJ_P0035447 9030617O03Rik protein_coding protein_coding MGP_NODShiLtJ_T0035448.1 MGP_NODShiLtJ_G0019877.1 mouse_genomes_project 12 112913200 112980779 + MGP_NODShiLtJ_P0035448 9030617O03Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035449.1 MGP_NODShiLtJ_G0019877.1 mouse_genomes_project 12 112920717 113014105 + MGP_NODShiLtJ_P0035449 9030617O03Rik protein_coding protein_coding MGP_NODShiLtJ_T0035450.1 MGP_NODShiLtJ_G0019877.1 mouse_genomes_project 12 113008924 113017157 + MGP_NODShiLtJ_P0035450 9030617O03Rik protein_coding protein_coding MGP_NODShiLtJ_T0035455.1 MGP_NODShiLtJ_G0019877.1 mouse_genomes_project 12 113030582 113040179 + 9030617O03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0035436.1 MGP_NODShiLtJ_G0019874.1 mouse_genomes_project 12 112285351 112295720 + MGP_NODShiLtJ_P0035436 Calm1 protein_coding protein_coding MGP_NODShiLtJ_T0035437.1 MGP_NODShiLtJ_G0019874.1 mouse_genomes_project 12 112285445 112289854 + Calm1 protein_coding retained_intron MGP_NODShiLtJ_T0035438.1 MGP_NODShiLtJ_G0019874.1 mouse_genomes_project 12 112286060 112295720 + MGP_NODShiLtJ_P0035438 Calm1 protein_coding protein_coding MGP_NODShiLtJ_T0035439.1 MGP_NODShiLtJ_G0019874.1 mouse_genomes_project 12 112291319 112292412 + Calm1 protein_coding retained_intron MGP_NODShiLtJ_T0035613.1 MGP_NODShiLtJ_G0019943.1 mouse_genomes_project 12 118678503 118699473 + MGP_NODShiLtJ_P0035613 Gskip protein_coding protein_coding MGP_NODShiLtJ_T0003361.1 MGP_NODShiLtJ_G0003083.1 mouse_genomes_project 12 94406097 94407188 + Gm17139 antisense antisense MGP_NODShiLtJ_T0100030.1 MGP_NODShiLtJ_G0038424.1 mouse_genomes_project 12 123022765 123022849 + Gm23347 snoRNA snoRNA MGP_NODShiLtJ_T0034127.1 MGP_NODShiLtJ_G0019417.1 mouse_genomes_project 12 874969 880625 + MGP_NODShiLtJ_P0034127 Pomc protein_coding protein_coding MGP_NODShiLtJ_T0006405.1 MGP_NODShiLtJ_G0005333.1 mouse_genomes_project 12 120930395 120972480 - Gm15208 lincRNA lincRNA MGP_NODShiLtJ_T0034328.1 MGP_NODShiLtJ_G0019493.1 mouse_genomes_project 12 23976021 24069058 + MGP_NODShiLtJ_P0034328 Kidins220 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034329.1 MGP_NODShiLtJ_G0019493.1 mouse_genomes_project 12 23976376 24065613 + MGP_NODShiLtJ_P0034329 Kidins220 protein_coding protein_coding MGP_NODShiLtJ_T0035394.1 MGP_NODShiLtJ_G0019863.1 mouse_genomes_project 12 110572602 110617879 + MGP_NODShiLtJ_P0035394 Spata7 protein_coding protein_coding MGP_NODShiLtJ_T0035395.1 MGP_NODShiLtJ_G0019863.1 mouse_genomes_project 12 110572607 110583575 + Spata7 protein_coding retained_intron MGP_NODShiLtJ_T0035396.1 MGP_NODShiLtJ_G0019863.1 mouse_genomes_project 12 110572612 110617879 + MGP_NODShiLtJ_P0035396 Spata7 protein_coding protein_coding MGP_NODShiLtJ_T0035397.1 MGP_NODShiLtJ_G0019863.1 mouse_genomes_project 12 110572635 110577200 + Spata7 protein_coding retained_intron MGP_NODShiLtJ_T0035398.1 MGP_NODShiLtJ_G0019863.1 mouse_genomes_project 12 110572642 110617876 + MGP_NODShiLtJ_P0035398 Spata7 protein_coding protein_coding MGP_NODShiLtJ_T0035399.1 MGP_NODShiLtJ_G0019863.1 mouse_genomes_project 12 110612518 110617342 + Spata7 protein_coding retained_intron MGP_NODShiLtJ_T0035298.1 MGP_NODShiLtJ_G0019834.1 mouse_genomes_project 12 96838331 96873381 - MGP_NODShiLtJ_P0035298 Tmed8 protein_coding protein_coding MGP_NODShiLtJ_T0000137.1 MGP_NODShiLtJ_G0000101.1 mouse_genomes_project 12 130322612 130323055 - MGP_NODShiLtJ_P0000137 Ighv8-12 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000143.1 MGP_NODShiLtJ_G0000101.1 mouse_genomes_project 12 130322628 130323029 - MGP_NODShiLtJ_P0000143 Ighv8-12 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000264.1 MGP_NODShiLtJ_G0000202.1 mouse_genomes_project 12 129210841 129211269 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000237.1 MGP_NODShiLtJ_G0000175.1 mouse_genomes_project 12 127707987 127708400 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0006439.1 MGP_NODShiLtJ_G0005345.1 mouse_genomes_project 12 125104647 125106738 - 2810029C07Rik lincRNA lincRNA MGP_NODShiLtJ_T0034615.1 MGP_NODShiLtJ_G0019608.1 mouse_genomes_project 12 60110019 60143941 + MGP_NODShiLtJ_P0034615 Brms1l protein_coding protein_coding MGP_NODShiLtJ_T0035594.1 MGP_NODShiLtJ_G0019933.1 mouse_genomes_project 12 117860366 117869899 + MGP_NODShiLtJ_P0035594 Glrx5 protein_coding protein_coding MGP_NODShiLtJ_T0035167.1 MGP_NODShiLtJ_G0019794.1 mouse_genomes_project 12 94039197 94066257 + MGP_NODShiLtJ_P0035167 Vsx2 protein_coding protein_coding MGP_NODShiLtJ_T0035168.1 MGP_NODShiLtJ_G0019794.1 mouse_genomes_project 12 94039275 94066257 + MGP_NODShiLtJ_P0035168 Vsx2 protein_coding protein_coding MGP_NODShiLtJ_T0034471.1 MGP_NODShiLtJ_G0019549.1 mouse_genomes_project 12 36250158 36261188 - MGP_NODShiLtJ_P0034471 Lrrc72 protein_coding protein_coding MGP_NODShiLtJ_T0034472.1 MGP_NODShiLtJ_G0019549.1 mouse_genomes_project 12 36251375 36298869 - MGP_NODShiLtJ_P0034472 Lrrc72 protein_coding protein_coding MGP_NODShiLtJ_T0034473.1 MGP_NODShiLtJ_G0019549.1 mouse_genomes_project 12 36254093 36261204 - Lrrc72 protein_coding retained_intron MGP_NODShiLtJ_T0097905.1 MGP_NODShiLtJ_G0036317.1 mouse_genomes_project 12 2948693 2948808 + Gm23752 rRNA rRNA MGP_NODShiLtJ_T0034687.1 MGP_NODShiLtJ_G0019632.1 mouse_genomes_project 12 71756259 71832549 + MGP_NODShiLtJ_P0034687 Fam179b protein_coding protein_coding MGP_NODShiLtJ_T0034463.1 MGP_NODShiLtJ_G0019544.1 mouse_genomes_project 12 36007167 36012267 + Agr2 protein_coding retained_intron MGP_NODShiLtJ_T0034464.1 MGP_NODShiLtJ_G0019544.1 mouse_genomes_project 12 36007167 36019302 + MGP_NODShiLtJ_P0034464 Agr2 protein_coding protein_coding MGP_NODShiLtJ_T0034644.1 MGP_NODShiLtJ_G0019620.1 mouse_genomes_project 12 63668945 63727509 - MGP_NODShiLtJ_P0034644 Sec23a protein_coding protein_coding MGP_NODShiLtJ_T0034645.1 MGP_NODShiLtJ_G0019620.1 mouse_genomes_project 12 63670318 63722727 - MGP_NODShiLtJ_P0034645 Sec23a protein_coding protein_coding MGP_NODShiLtJ_T0034646.1 MGP_NODShiLtJ_G0019620.1 mouse_genomes_project 12 63677569 63683490 - Sec23a protein_coding retained_intron MGP_NODShiLtJ_T0034647.1 MGP_NODShiLtJ_G0019620.1 mouse_genomes_project 12 63686478 63697788 - Sec23a protein_coding retained_intron MGP_NODShiLtJ_T0034648.1 MGP_NODShiLtJ_G0019620.1 mouse_genomes_project 12 63722145 63727509 - Sec23a protein_coding retained_intron MGP_NODShiLtJ_T0034562.1 MGP_NODShiLtJ_G0019581.1 mouse_genomes_project 12 55543286 55635139 - MGP_NODShiLtJ_P0034562 Hectd1 protein_coding protein_coding MGP_NODShiLtJ_T0034563.1 MGP_NODShiLtJ_G0019581.1 mouse_genomes_project 12 55543286 55635139 - MGP_NODShiLtJ_P0034563 Hectd1 protein_coding protein_coding MGP_NODShiLtJ_T0035725.1 MGP_NODShiLtJ_G0019972.1 mouse_genomes_project 12 124321981 124341749 + MGP_NODShiLtJ_P0035725 Zfp839 protein_coding protein_coding MGP_NODShiLtJ_T0034528.1 MGP_NODShiLtJ_G0019565.1 mouse_genomes_project 12 42657090 42693952 - MGP_NODShiLtJ_P0034528 Lrrn3 protein_coding protein_coding MGP_NODShiLtJ_T0035793.1 MGP_NODShiLtJ_G0019993.1 mouse_genomes_project 12 125386680 125401093 + MGP_NODShiLtJ_P0035793 Zfyve21 protein_coding protein_coding MGP_NODShiLtJ_T0099988.1 MGP_NODShiLtJ_G0038382.1 mouse_genomes_project 12 42547291 42547423 - Gm25497 snoRNA snoRNA MGP_NODShiLtJ_T0034350.1 MGP_NODShiLtJ_G0019505.1 mouse_genomes_project 12 27981280 28043943 - MGP_NODShiLtJ_P0034350 Trappc12 protein_coding protein_coding MGP_NODShiLtJ_T0034351.1 MGP_NODShiLtJ_G0019505.1 mouse_genomes_project 12 27981280 28043884 - MGP_NODShiLtJ_P0034351 Trappc12 protein_coding protein_coding MGP_NODShiLtJ_T0034352.1 MGP_NODShiLtJ_G0019505.1 mouse_genomes_project 12 28000415 28043943 - MGP_NODShiLtJ_P0034352 Trappc12 protein_coding protein_coding MGP_NODShiLtJ_T0009742.1 MGP_NODShiLtJ_G0007875.1 mouse_genomes_project 12 122927451 122927548 + Mir337 miRNA miRNA MGP_NODShiLtJ_T0034794.1 MGP_NODShiLtJ_G0019672.1 mouse_genomes_project 12 79124215 79228445 + MGP_NODShiLtJ_P0034794 2700049A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0034795.1 MGP_NODShiLtJ_G0019672.1 mouse_genomes_project 12 79124215 79228445 + MGP_NODShiLtJ_P0034795 2700049A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0034796.1 MGP_NODShiLtJ_G0019672.1 mouse_genomes_project 12 79138401 79143216 + MGP_NODShiLtJ_P0034796 2700049A03Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034797.1 MGP_NODShiLtJ_G0019672.1 mouse_genomes_project 12 79160423 79228441 + MGP_NODShiLtJ_P0034797 2700049A03Rik protein_coding protein_coding MGP_NODShiLtJ_T0009701.1 MGP_NODShiLtJ_G0007834.1 mouse_genomes_project 12 37181615 37181716 - Gm44326 miRNA miRNA MGP_NODShiLtJ_T0009707.1 MGP_NODShiLtJ_G0007840.1 mouse_genomes_project 12 76992184 76992254 + miRNA miRNA MGP_NODShiLtJ_T0034910.1 MGP_NODShiLtJ_G0019713.1 mouse_genomes_project 12 84934829 84937588 + MGP_NODShiLtJ_P0034910 Hspa2 protein_coding protein_coding MGP_NODShiLtJ_T0006346.1 MGP_NODShiLtJ_G0005286.1 mouse_genomes_project 12 52702804 52723207 + 3110039M20Rik lincRNA lincRNA MGP_NODShiLtJ_T0006347.1 MGP_NODShiLtJ_G0005286.1 mouse_genomes_project 12 52703811 52722985 + 3110039M20Rik lincRNA lincRNA MGP_NODShiLtJ_T0000140.1 MGP_NODShiLtJ_G0000104.1 mouse_genomes_project 12 130322613 130322913 - MGP_NODShiLtJ_P0000140 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000141.1 MGP_NODShiLtJ_G0000104.1 mouse_genomes_project 12 130322614 130322913 - MGP_NODShiLtJ_P0000141 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034700.1 MGP_NODShiLtJ_G0019638.1 mouse_genomes_project 12 73354885 73355911 - MGP_NODShiLtJ_P0034700 Rpl10l protein_coding protein_coding MGP_NODShiLtJ_T0035678.1 MGP_NODShiLtJ_G0019961.1 mouse_genomes_project 12 122174556 122320381 + MGP_NODShiLtJ_P0035678 Wdr25 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097909.1 MGP_NODShiLtJ_G0036321.1 mouse_genomes_project 12 27278222 27278360 - Gm25923 rRNA rRNA MGP_NODShiLtJ_T0035152.1 MGP_NODShiLtJ_G0019789.1 mouse_genomes_project 12 93818816 93854500 - MGP_NODShiLtJ_P0035152 Entpd5 protein_coding protein_coding MGP_NODShiLtJ_T0035153.1 MGP_NODShiLtJ_G0019789.1 mouse_genomes_project 12 93818816 93854500 - MGP_NODShiLtJ_P0035153 Entpd5 protein_coding protein_coding MGP_NODShiLtJ_T0035154.1 MGP_NODShiLtJ_G0019789.1 mouse_genomes_project 12 93818834 93858065 - MGP_NODShiLtJ_P0035154 Entpd5 protein_coding protein_coding MGP_NODShiLtJ_T0035155.1 MGP_NODShiLtJ_G0019789.1 mouse_genomes_project 12 93818837 93858050 - MGP_NODShiLtJ_P0035155 Entpd5 protein_coding protein_coding MGP_NODShiLtJ_T0035156.1 MGP_NODShiLtJ_G0019789.1 mouse_genomes_project 12 93821636 93847965 - MGP_NODShiLtJ_P0035156 Entpd5 protein_coding protein_coding MGP_NODShiLtJ_T0035157.1 MGP_NODShiLtJ_G0019789.1 mouse_genomes_project 12 93821968 93847916 - MGP_NODShiLtJ_P0035157 Entpd5 protein_coding protein_coding MGP_NODShiLtJ_T0035158.1 MGP_NODShiLtJ_G0019789.1 mouse_genomes_project 12 93825317 93832587 - Entpd5 protein_coding retained_intron MGP_NODShiLtJ_T0035159.1 MGP_NODShiLtJ_G0019789.1 mouse_genomes_project 12 93851853 93858020 - Entpd5 protein_coding processed_transcript MGP_NODShiLtJ_T0100035.1 MGP_NODShiLtJ_G0038429.1 mouse_genomes_project 12 123031697 123031772 + Gm25856 snoRNA snoRNA MGP_NODShiLtJ_T0034303.1 MGP_NODShiLtJ_G0019485.1 mouse_genomes_project 12 20206754 20235019 - MGP_NODShiLtJ_P0034303 Ywhaq protein_coding protein_coding MGP_NODShiLtJ_T0034304.1 MGP_NODShiLtJ_G0019485.1 mouse_genomes_project 12 20212928 20234469 - Ywhaq protein_coding processed_transcript MGP_NODShiLtJ_T0034305.1 MGP_NODShiLtJ_G0019485.1 mouse_genomes_project 12 20213636 20216135 - Ywhaq protein_coding retained_intron MGP_NODShiLtJ_T0006407.1 MGP_NODShiLtJ_G0005335.1 mouse_genomes_project 12 121796622 121817137 - Gm16596 lincRNA lincRNA MGP_NODShiLtJ_T0012697.1 MGP_NODShiLtJ_G0010805.1 mouse_genomes_project 12 69221873 69222170 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034405.1 MGP_NODShiLtJ_G0019523.1 mouse_genomes_project 12 31153184 31168710 - MGP_NODShiLtJ_P0034405 Dus4l protein_coding protein_coding MGP_NODShiLtJ_T0017189.1 MGP_NODShiLtJ_G0015110.1 mouse_genomes_project 12 116530289 116543712 - Gm28577 processed_transcript processed_transcript MGP_NODShiLtJ_T0034720.1 MGP_NODShiLtJ_G0019647.1 mouse_genomes_project 12 77079967 77081421 + Klhdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0034721.1 MGP_NODShiLtJ_G0019647.1 mouse_genomes_project 12 77080612 77128009 + MGP_NODShiLtJ_P0034721 Klhdc1 protein_coding protein_coding MGP_NODShiLtJ_T0034722.1 MGP_NODShiLtJ_G0019647.1 mouse_genomes_project 12 77080694 77081423 + Klhdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0034723.1 MGP_NODShiLtJ_G0019647.1 mouse_genomes_project 12 77080698 77126696 + MGP_NODShiLtJ_P0034723 Klhdc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035440.1 MGP_NODShiLtJ_G0019875.1 mouse_genomes_project 12 112389172 112513405 - MGP_NODShiLtJ_P0035440 Ttc7b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035441.1 MGP_NODShiLtJ_G0019875.1 mouse_genomes_project 12 112389175 112618311 - MGP_NODShiLtJ_P0035441 Ttc7b protein_coding protein_coding MGP_NODShiLtJ_T0009688.1 MGP_NODShiLtJ_G0007821.1 mouse_genomes_project 12 591230 591293 + Gm26050 miRNA miRNA MGP_NODShiLtJ_T0000116.1 MGP_NODShiLtJ_G0000088.1 mouse_genomes_project 12 128806384 128806853 - MGP_NODShiLtJ_P0000116 Ighv1-12 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000117.1 MGP_NODShiLtJ_G0000088.1 mouse_genomes_project 12 128806384 128806853 - MGP_NODShiLtJ_P0000117 Ighv1-12 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000118.1 MGP_NODShiLtJ_G0000088.1 mouse_genomes_project 12 128806384 128806678 - MGP_NODShiLtJ_P0000118 Ighv1-12 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0017180.1 MGP_NODShiLtJ_G0015104.1 mouse_genomes_project 12 90669389 90695837 + 6530401F13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0006367.1 MGP_NODShiLtJ_G0005300.1 mouse_genomes_project 12 89782072 89784934 + Gm26796 lincRNA lincRNA MGP_NODShiLtJ_T0034724.1 MGP_NODShiLtJ_G0019648.1 mouse_genomes_project 12 77142441 77148344 + Klhdc2 protein_coding retained_intron MGP_NODShiLtJ_T0034725.1 MGP_NODShiLtJ_G0019648.1 mouse_genomes_project 12 77142482 77158843 + MGP_NODShiLtJ_P0034725 Klhdc2 protein_coding protein_coding MGP_NODShiLtJ_T0034726.1 MGP_NODShiLtJ_G0019648.1 mouse_genomes_project 12 77142515 77156681 + Klhdc2 protein_coding retained_intron MGP_NODShiLtJ_T0034727.1 MGP_NODShiLtJ_G0019648.1 mouse_genomes_project 12 77149622 77156709 + Klhdc2 protein_coding retained_intron MGP_NODShiLtJ_T0035771.1 MGP_NODShiLtJ_G0019990.1 mouse_genomes_project 12 125270287 125297000 + MGP_NODShiLtJ_P0035771 Apopt1 protein_coding protein_coding MGP_NODShiLtJ_T0035772.1 MGP_NODShiLtJ_G0019990.1 mouse_genomes_project 12 125270306 125318693 + MGP_NODShiLtJ_P0035772 Apopt1 protein_coding protein_coding MGP_NODShiLtJ_T0035773.1 MGP_NODShiLtJ_G0019990.1 mouse_genomes_project 12 125270306 125314304 + MGP_NODShiLtJ_P0035773 Apopt1 protein_coding protein_coding MGP_NODShiLtJ_T0035774.1 MGP_NODShiLtJ_G0019990.1 mouse_genomes_project 12 125270310 125281368 + MGP_NODShiLtJ_P0035774 Apopt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035775.1 MGP_NODShiLtJ_G0019990.1 mouse_genomes_project 12 125270312 125286785 + MGP_NODShiLtJ_P0035775 Apopt1 protein_coding protein_coding MGP_NODShiLtJ_T0097920.1 MGP_NODShiLtJ_G0036332.1 mouse_genomes_project 12 100958415 100958532 + n-R5s65 rRNA rRNA MGP_NODShiLtJ_T0034582.1 MGP_NODShiLtJ_G0019592.1 mouse_genomes_project 12 58844119 58902525 - MGP_NODShiLtJ_P0034582 Snx6 protein_coding protein_coding MGP_NODShiLtJ_T0017209.1 MGP_NODShiLtJ_G0015112.1 mouse_genomes_project 12 125286061 125286797 + Gm15995 processed_transcript processed_transcript MGP_NODShiLtJ_T0035520.1 MGP_NODShiLtJ_G0019901.1 mouse_genomes_project 12 115728763 115735332 + MGP_NODShiLtJ_P0035520 Fam181a protein_coding protein_coding MGP_NODShiLtJ_T0035521.1 MGP_NODShiLtJ_G0019901.1 mouse_genomes_project 12 115732741 115734107 + MGP_NODShiLtJ_P0035521 Fam181a protein_coding protein_coding MGP_NODShiLtJ_T0035522.1 MGP_NODShiLtJ_G0019901.1 mouse_genomes_project 12 115732747 115735332 + MGP_NODShiLtJ_P0035522 Fam181a protein_coding protein_coding MGP_NODShiLtJ_T0012678.1 MGP_NODShiLtJ_G0010786.1 mouse_genomes_project 12 11916022 11917014 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100012.1 MGP_NODShiLtJ_G0038406.1 mouse_genomes_project 12 101785001 101785144 - Gm25776 snoRNA snoRNA MGP_NODShiLtJ_T0035568.1 MGP_NODShiLtJ_G0019917.1 mouse_genomes_project 12 116656817 116667514 + MGP_NODShiLtJ_P0035568 Serpina5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035569.1 MGP_NODShiLtJ_G0019917.1 mouse_genomes_project 12 116661199 116669515 + MGP_NODShiLtJ_P0035569 Serpina5 protein_coding protein_coding MGP_NODShiLtJ_T0034945.1 MGP_NODShiLtJ_G0019727.1 mouse_genomes_project 12 87680679 87700793 - MGP_NODShiLtJ_P0034945 Atp6v1d protein_coding protein_coding MGP_NODShiLtJ_T0000250.1 MGP_NODShiLtJ_G0000188.1 mouse_genomes_project 12 128423703 128423994 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0012730.1 MGP_NODShiLtJ_G0010838.1 mouse_genomes_project 12 119637105 119638595 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100016.1 MGP_NODShiLtJ_G0038410.1 mouse_genomes_project 12 119281548 119281680 + Gm24986 snoRNA snoRNA MGP_NODShiLtJ_T0006375.1 MGP_NODShiLtJ_G0005308.1 mouse_genomes_project 12 96512989 96514153 - Gm26698 lincRNA lincRNA MGP_NODShiLtJ_T0012724.1 MGP_NODShiLtJ_G0010832.1 mouse_genomes_project 12 114143901 114144248 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006332.1 MGP_NODShiLtJ_G0005276.1 mouse_genomes_project 12 20236595 20238284 + Gm4419 lincRNA lincRNA MGP_NODShiLtJ_T0034390.1 MGP_NODShiLtJ_G0019519.1 mouse_genomes_project 12 30862592 30942675 + MGP_NODShiLtJ_P0034390 Slc26a3 protein_coding protein_coding MGP_NODShiLtJ_T0034391.1 MGP_NODShiLtJ_G0019519.1 mouse_genomes_project 12 30929913 30966883 + MGP_NODShiLtJ_P0034391 Slc26a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034392.1 MGP_NODShiLtJ_G0019519.1 mouse_genomes_project 12 30929915 30967305 + MGP_NODShiLtJ_P0034392 Slc26a3 protein_coding protein_coding MGP_NODShiLtJ_T0034393.1 MGP_NODShiLtJ_G0019519.1 mouse_genomes_project 12 30929915 30944588 + MGP_NODShiLtJ_P0034393 Slc26a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034394.1 MGP_NODShiLtJ_G0019519.1 mouse_genomes_project 12 30929929 30944612 + Slc26a3 protein_coding retained_intron MGP_NODShiLtJ_T0034395.1 MGP_NODShiLtJ_G0019519.1 mouse_genomes_project 12 30939123 30947788 + Slc26a3 protein_coding retained_intron MGP_NODShiLtJ_T0034396.1 MGP_NODShiLtJ_G0019519.1 mouse_genomes_project 12 30964259 30965211 + MGP_NODShiLtJ_P0034396 Slc26a3 protein_coding protein_coding MGP_NODShiLtJ_T0000249.1 MGP_NODShiLtJ_G0000187.1 mouse_genomes_project 12 128416471 128416766 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0097911.1 MGP_NODShiLtJ_G0036323.1 mouse_genomes_project 12 47468666 47468750 + Gm22076 rRNA rRNA MGP_NODShiLtJ_T0034397.1 MGP_NODShiLtJ_G0019520.1 mouse_genomes_project 12 30978675 30996653 - MGP_NODShiLtJ_P0034397 Cbll1 protein_coding protein_coding MGP_NODShiLtJ_T0034398.1 MGP_NODShiLtJ_G0019520.1 mouse_genomes_project 12 30978782 30996653 - MGP_NODShiLtJ_P0034398 Cbll1 protein_coding protein_coding MGP_NODShiLtJ_T0034399.1 MGP_NODShiLtJ_G0019520.1 mouse_genomes_project 12 30981272 30996653 - MGP_NODShiLtJ_P0034399 Cbll1 protein_coding protein_coding MGP_NODShiLtJ_T0034400.1 MGP_NODShiLtJ_G0019520.1 mouse_genomes_project 12 30981908 30996594 - MGP_NODShiLtJ_P0034400 Cbll1 protein_coding protein_coding MGP_NODShiLtJ_T0034401.1 MGP_NODShiLtJ_G0019520.1 mouse_genomes_project 12 30981918 30996592 - MGP_NODShiLtJ_P0034401 Cbll1 protein_coding protein_coding MGP_NODShiLtJ_T0012745.1 MGP_NODShiLtJ_G0010853.1 mouse_genomes_project 12 131435485 131435783 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034599.1 MGP_NODShiLtJ_G0019600.1 mouse_genomes_project 12 59386035 59402364 + MGP_NODShiLtJ_P0034599 protein_coding protein_coding MGP_NODShiLtJ_T0034592.1 MGP_NODShiLtJ_G0019595.1 mouse_genomes_project 12 59114630 59115002 - MGP_NODShiLtJ_P0034592 Gm20403 protein_coding protein_coding MGP_NODShiLtJ_T0009717.1 MGP_NODShiLtJ_G0007850.1 mouse_genomes_project 12 85676965 85677033 - Gm22696 miRNA miRNA MGP_NODShiLtJ_T0035812.1 MGP_NODShiLtJ_G0020000.1 mouse_genomes_project 12 126044892 126055757 - MGP_NODShiLtJ_P0035812 A730018C14Rik protein_coding protein_coding MGP_NODShiLtJ_T0034542.1 MGP_NODShiLtJ_G0019570.1 mouse_genomes_project 12 49167834 49322706 - MGP_NODShiLtJ_P0034542 Nova1 protein_coding protein_coding MGP_NODShiLtJ_T0100017.1 MGP_NODShiLtJ_G0038411.1 mouse_genomes_project 12 122977231 122977306 + Gm24564 snoRNA snoRNA MGP_NODShiLtJ_T0035834.1 MGP_NODShiLtJ_G0020009.1 mouse_genomes_project 12 126426391 126434296 + MGP_NODShiLtJ_P0035834 Pld4 protein_coding protein_coding MGP_NODShiLtJ_T0098759.1 MGP_NODShiLtJ_G0037153.1 mouse_genomes_project 12 58831516 58831680 - Gm22634 snRNA snRNA MGP_NODShiLtJ_T0034461.1 MGP_NODShiLtJ_G0019543.1 mouse_genomes_project 12 35934566 35960358 + MGP_NODShiLtJ_P0034461 Agr3 protein_coding protein_coding MGP_NODShiLtJ_T0034462.1 MGP_NODShiLtJ_G0019543.1 mouse_genomes_project 12 35934568 35937307 + MGP_NODShiLtJ_P0034462 Agr3 protein_coding protein_coding MGP_NODShiLtJ_T0000089.1 MGP_NODShiLtJ_G0000069.1 mouse_genomes_project 12 128382165 128382596 - MGP_NODShiLtJ_P0000089 Ighv3-6 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000090.1 MGP_NODShiLtJ_G0000069.1 mouse_genomes_project 12 128382170 128382596 - MGP_NODShiLtJ_P0000090 Ighv3-6 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034338.1 MGP_NODShiLtJ_G0019499.1 mouse_genomes_project 12 27778335 27784846 - protein_coding processed_transcript MGP_NODShiLtJ_T0034339.1 MGP_NODShiLtJ_G0019499.1 mouse_genomes_project 12 27784187 27794310 - protein_coding processed_transcript MGP_NODShiLtJ_T0034340.1 MGP_NODShiLtJ_G0019499.1 mouse_genomes_project 12 27784415 27821246 - MGP_NODShiLtJ_P0034340 protein_coding protein_coding MGP_NODShiLtJ_T0035597.1 MGP_NODShiLtJ_G0019936.1 mouse_genomes_project 12 118060991 118075685 + MGP_NODShiLtJ_P0035597 Tcl1b3 protein_coding protein_coding MGP_NODShiLtJ_T0006368.1 MGP_NODShiLtJ_G0005301.1 mouse_genomes_project 12 89919572 89921671 - Gm26545 lincRNA lincRNA MGP_NODShiLtJ_T0034918.1 MGP_NODShiLtJ_G0019718.1 mouse_genomes_project 12 85312540 85336222 + MGP_NODShiLtJ_P0034918 Churc1 protein_coding protein_coding MGP_NODShiLtJ_T0034921.1 MGP_NODShiLtJ_G0019718.1 mouse_genomes_project 12 85316405 85323853 + Churc1 protein_coding retained_intron MGP_NODShiLtJ_T0098747.1 MGP_NODShiLtJ_G0037141.1 mouse_genomes_project 12 20169496 20169595 + Gm22766 snRNA snRNA MGP_NODShiLtJ_T0098782.1 MGP_NODShiLtJ_G0037176.1 mouse_genomes_project 12 110543574 110543637 + Gm25486 snRNA snRNA MGP_NODShiLtJ_T0012736.1 MGP_NODShiLtJ_G0010844.1 mouse_genomes_project 12 126869715 126870535 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098776.1 MGP_NODShiLtJ_G0037170.1 mouse_genomes_project 12 87971128 87971233 - Gm27297 snRNA snRNA MGP_NODShiLtJ_T0034843.1 MGP_NODShiLtJ_G0019689.1 mouse_genomes_project 12 81288386 81456007 + MGP_NODShiLtJ_P0034843 Mnat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034844.1 MGP_NODShiLtJ_G0019689.1 mouse_genomes_project 12 81288386 81457142 + MGP_NODShiLtJ_P0034844 Mnat1 protein_coding protein_coding MGP_NODShiLtJ_T0034845.1 MGP_NODShiLtJ_G0019689.1 mouse_genomes_project 12 81288386 81412559 + MGP_NODShiLtJ_P0034845 Mnat1 protein_coding protein_coding MGP_NODShiLtJ_T0034846.1 MGP_NODShiLtJ_G0019689.1 mouse_genomes_project 12 81288506 81455690 + MGP_NODShiLtJ_P0034846 Mnat1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009710.1 MGP_NODShiLtJ_G0007843.1 mouse_genomes_project 12 77224206 77224276 - miRNA miRNA MGP_NODShiLtJ_T0009753.1 MGP_NODShiLtJ_G0007886.1 mouse_genomes_project 12 122939327 122939407 - Mir3071 miRNA miRNA MGP_NODShiLtJ_T0011218.1 MGP_NODShiLtJ_G0009351.1 mouse_genomes_project 12 77224118 77224418 - Rn7s2 misc_RNA misc_RNA MGP_NODShiLtJ_T0006397.1 MGP_NODShiLtJ_G0005326.1 mouse_genomes_project 12 119952565 119996089 + 1700013N06Rik lincRNA lincRNA MGP_NODShiLtJ_T0035902.1 MGP_NODShiLtJ_G0020033.1 mouse_genomes_project 12 132727150 132765769 + MGP_NODShiLtJ_P0035902 Cdca7l protein_coding protein_coding MGP_NODShiLtJ_T0035903.1 MGP_NODShiLtJ_G0020033.1 mouse_genomes_project 12 132727519 132760822 + MGP_NODShiLtJ_P0035903 Cdca7l protein_coding protein_coding MGP_NODShiLtJ_T0035904.1 MGP_NODShiLtJ_G0020033.1 mouse_genomes_project 12 132727523 132762694 + MGP_NODShiLtJ_P0035904 Cdca7l protein_coding protein_coding MGP_NODShiLtJ_T0009694.1 MGP_NODShiLtJ_G0007827.1 mouse_genomes_project 12 27969916 27969981 + Mir6937 miRNA miRNA MGP_NODShiLtJ_T0035485.1 MGP_NODShiLtJ_G0019887.1 mouse_genomes_project 12 114719974 114743879 - MGP_NODShiLtJ_P0035485 Lgmn protein_coding protein_coding MGP_NODShiLtJ_T0035486.1 MGP_NODShiLtJ_G0019887.1 mouse_genomes_project 12 114719988 114757128 - MGP_NODShiLtJ_P0035486 Lgmn protein_coding protein_coding MGP_NODShiLtJ_T0035487.1 MGP_NODShiLtJ_G0019887.1 mouse_genomes_project 12 114725979 114731887 - Lgmn protein_coding retained_intron MGP_NODShiLtJ_T0034863.1 MGP_NODShiLtJ_G0019697.1 mouse_genomes_project 12 82248507 82550190 + MGP_NODShiLtJ_P0034863 Syt16 protein_coding protein_coding MGP_NODShiLtJ_T0034864.1 MGP_NODShiLtJ_G0019697.1 mouse_genomes_project 12 82433710 82550186 + MGP_NODShiLtJ_P0034864 Syt16 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034679.1 MGP_NODShiLtJ_G0019627.1 mouse_genomes_project 12 66960200 67090876 + Lrfn5 protein_coding processed_transcript MGP_NODShiLtJ_T0034680.1 MGP_NODShiLtJ_G0019627.1 mouse_genomes_project 12 66960986 67416933 + MGP_NODShiLtJ_P0034680 Lrfn5 protein_coding protein_coding MGP_NODShiLtJ_T0034681.1 MGP_NODShiLtJ_G0019627.1 mouse_genomes_project 12 66960986 67404624 + MGP_NODShiLtJ_P0034681 Lrfn5 protein_coding protein_coding MGP_NODShiLtJ_T0034682.1 MGP_NODShiLtJ_G0019627.1 mouse_genomes_project 12 67415263 67417347 + Lrfn5 protein_coding retained_intron MGP_NODShiLtJ_T0034211.1 MGP_NODShiLtJ_G0019448.1 mouse_genomes_project 12 6654647 6661030 + MGP_NODShiLtJ_P0034211 Ttc32 protein_coding protein_coding MGP_NODShiLtJ_T0035798.1 MGP_NODShiLtJ_G0019997.1 mouse_genomes_project 12 125564339 125566546 - MGP_NODShiLtJ_P0035798 Rd3l protein_coding protein_coding MGP_NODShiLtJ_T0035799.1 MGP_NODShiLtJ_G0019997.1 mouse_genomes_project 12 125564340 125565372 - MGP_NODShiLtJ_P0035799 Rd3l protein_coding protein_coding MGP_NODShiLtJ_T0035800.1 MGP_NODShiLtJ_G0019997.1 mouse_genomes_project 12 125564373 125566283 - MGP_NODShiLtJ_P0035800 Rd3l protein_coding protein_coding MGP_NODShiLtJ_T0035801.1 MGP_NODShiLtJ_G0019997.1 mouse_genomes_project 12 125564417 125565698 - MGP_NODShiLtJ_P0035801 Rd3l protein_coding protein_coding MGP_NODShiLtJ_T0035802.1 MGP_NODShiLtJ_G0019997.1 mouse_genomes_project 12 125564419 125566331 - MGP_NODShiLtJ_P0035802 Rd3l protein_coding protein_coding MGP_NODShiLtJ_T0000255.1 MGP_NODShiLtJ_G0000193.1 mouse_genomes_project 12 128702482 128702775 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035302.1 MGP_NODShiLtJ_G0019836.1 mouse_genomes_project 12 96896520 96909875 - MGP_NODShiLtJ_P0035302 Noxred1 protein_coding protein_coding MGP_NODShiLtJ_T0099996.1 MGP_NODShiLtJ_G0038390.1 mouse_genomes_project 12 63861345 63861467 + Gm24233 snoRNA snoRNA MGP_NODShiLtJ_T0012723.1 MGP_NODShiLtJ_G0010831.1 mouse_genomes_project 12 113398432 113399225 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011222.1 MGP_NODShiLtJ_G0009355.1 mouse_genomes_project 12 85251809 85252091 + Gm24010 misc_RNA misc_RNA MGP_NODShiLtJ_T0000139.1 MGP_NODShiLtJ_G0000103.1 mouse_genomes_project 12 130322612 130323060 - MGP_NODShiLtJ_P0000139 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034710.1 MGP_NODShiLtJ_G0019640.1 mouse_genomes_project 12 76990473 76991934 - MGP_NODShiLtJ_P0034710 Rps29 protein_coding protein_coding MGP_NODShiLtJ_T0034711.1 MGP_NODShiLtJ_G0019640.1 mouse_genomes_project 12 76991109 76991802 - Rps29 protein_coding retained_intron MGP_NODShiLtJ_T0035276.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96588714 96606325 + MGP_NODShiLtJ_P0035276 Cipc protein_coding protein_coding MGP_NODShiLtJ_T0035277.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96588714 96607460 + MGP_NODShiLtJ_P0035277 Cipc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035278.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96588770 96605625 + MGP_NODShiLtJ_P0035278 Cipc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035279.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96589014 96609018 + MGP_NODShiLtJ_P0035279 Cipc protein_coding protein_coding MGP_NODShiLtJ_T0035280.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96589067 96594832 + Cipc protein_coding retained_intron MGP_NODShiLtJ_T0035281.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96589089 96604061 + MGP_NODShiLtJ_P0035281 Cipc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035282.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96589125 96604060 + MGP_NODShiLtJ_P0035282 Cipc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035283.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96589137 96603977 + MGP_NODShiLtJ_P0035283 Cipc protein_coding protein_coding MGP_NODShiLtJ_T0035284.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96589161 96605541 + MGP_NODShiLtJ_P0035284 Cipc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035285.1 MGP_NODShiLtJ_G0019828.1 mouse_genomes_project 12 96594323 96606491 + MGP_NODShiLtJ_P0035285 Cipc protein_coding protein_coding MGP_NODShiLtJ_T0098788.1 MGP_NODShiLtJ_G0037182.1 mouse_genomes_project 12 131312858 131312922 - Gm27649 snRNA snRNA MGP_NODShiLtJ_T0034628.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61652762 61814873 + Mipol1 protein_coding retained_intron MGP_NODShiLtJ_T0034629.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61652764 61778688 + Mipol1 protein_coding retained_intron MGP_NODShiLtJ_T0034630.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61652774 61981502 + MGP_NODShiLtJ_P0034630 Mipol1 protein_coding protein_coding MGP_NODShiLtJ_T0034631.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61652774 61936028 + MGP_NODShiLtJ_P0034631 Mipol1 protein_coding protein_coding MGP_NODShiLtJ_T0034632.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61652819 61828547 + Mipol1 protein_coding retained_intron MGP_NODShiLtJ_T0034633.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61721178 61981502 + MGP_NODShiLtJ_P0034633 Mipol1 protein_coding protein_coding MGP_NODShiLtJ_T0034634.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61721178 61947889 + MGP_NODShiLtJ_P0034634 Mipol1 protein_coding protein_coding MGP_NODShiLtJ_T0034635.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61751576 61753162 + Mipol1 protein_coding retained_intron MGP_NODShiLtJ_T0034636.1 MGP_NODShiLtJ_G0019615.1 mouse_genomes_project 12 61786960 61827966 + Mipol1 protein_coding processed_transcript MGP_NODShiLtJ_T0006435.1 MGP_NODShiLtJ_G0005342.1 mouse_genomes_project 12 124314060 124316919 - Gm26912 lincRNA lincRNA MGP_NODShiLtJ_T0035460.1 MGP_NODShiLtJ_G0019880.1 mouse_genomes_project 12 113193542 113239960 - MGP_NODShiLtJ_P0035460 Smek1 protein_coding protein_coding MGP_NODShiLtJ_T0035461.1 MGP_NODShiLtJ_G0019880.1 mouse_genomes_project 12 113193542 113239960 - MGP_NODShiLtJ_P0035461 Smek1 protein_coding protein_coding MGP_NODShiLtJ_T0034406.1 MGP_NODShiLtJ_G0019524.1 mouse_genomes_project 12 31168752 31487313 + MGP_NODShiLtJ_P0034406 Cog5 protein_coding protein_coding MGP_NODShiLtJ_T0034410.1 MGP_NODShiLtJ_G0019524.1 mouse_genomes_project 12 31295347 31475443 + MGP_NODShiLtJ_P0034410 Cog5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034565.1 MGP_NODShiLtJ_G0019583.1 mouse_genomes_project 12 55806040 55826731 - MGP_NODShiLtJ_P0034565 Dtd2 protein_coding protein_coding MGP_NODShiLtJ_T0034566.1 MGP_NODShiLtJ_G0019583.1 mouse_genomes_project 12 55815490 55826731 - MGP_NODShiLtJ_P0034566 Dtd2 protein_coding protein_coding MGP_NODShiLtJ_T0000110.1 MGP_NODShiLtJ_G0000084.1 mouse_genomes_project 12 128708231 128708773 - MGP_NODShiLtJ_P0000110 Ighv1-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0009728.1 MGP_NODShiLtJ_G0007861.1 mouse_genomes_project 12 113174463 113174560 - Mir1190 miRNA miRNA MGP_NODShiLtJ_T0006369.1 MGP_NODShiLtJ_G0005302.1 mouse_genomes_project 12 89972044 89973062 - 1700052I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0035636.1 MGP_NODShiLtJ_G0019947.1 mouse_genomes_project 12 120644253 120645258 + MGP_NODShiLtJ_P0035636 3110018I06Rik protein_coding protein_coding MGP_NODShiLtJ_T0034373.1 MGP_NODShiLtJ_G0019511.1 mouse_genomes_project 12 29962576 29969326 + MGP_NODShiLtJ_P0034373 Tmem18 protein_coding protein_coding MGP_NODShiLtJ_T0035565.1 MGP_NODShiLtJ_G0019915.1 mouse_genomes_project 12 116541963 116561047 - MGP_NODShiLtJ_P0035565 Serpina9 protein_coding protein_coding MGP_NODShiLtJ_T0035566.1 MGP_NODShiLtJ_G0019915.1 mouse_genomes_project 12 116555740 116561150 - MGP_NODShiLtJ_P0035566 Serpina9 protein_coding protein_coding MGP_NODShiLtJ_T0035895.1 MGP_NODShiLtJ_G0020031.1 mouse_genomes_project 12 131320324 131612413 + Ptprn2 protein_coding processed_transcript MGP_NODShiLtJ_T0035896.1 MGP_NODShiLtJ_G0020031.1 mouse_genomes_project 12 131320333 131980171 + Ptprn2 protein_coding processed_transcript MGP_NODShiLtJ_T0035897.1 MGP_NODShiLtJ_G0020031.1 mouse_genomes_project 12 131320333 132133438 + MGP_NODShiLtJ_P0035897 Ptprn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035898.1 MGP_NODShiLtJ_G0020031.1 mouse_genomes_project 12 131320374 131682523 + Ptprn2 protein_coding retained_intron MGP_NODShiLtJ_T0035899.1 MGP_NODShiLtJ_G0020031.1 mouse_genomes_project 12 131320437 132133410 + MGP_NODShiLtJ_P0035899 Ptprn2 protein_coding protein_coding MGP_NODShiLtJ_T0000144.1 MGP_NODShiLtJ_G0000105.1 mouse_genomes_project 12 130605021 130605476 - MGP_NODShiLtJ_P0000144 Ighv1-78 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000145.1 MGP_NODShiLtJ_G0000105.1 mouse_genomes_project 12 130605021 130605315 - MGP_NODShiLtJ_P0000145 Ighv1-78 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0012699.1 MGP_NODShiLtJ_G0010807.1 mouse_genomes_project 12 76974086 76974723 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034613.1 MGP_NODShiLtJ_G0019606.1 mouse_genomes_project 12 59832034 59835134 + MGP_NODShiLtJ_P0034613 Insm2 protein_coding protein_coding MGP_NODShiLtJ_T0034847.1 MGP_NODShiLtJ_G0019690.1 mouse_genomes_project 12 81463777 81470477 - MGP_NODShiLtJ_P0034847 Trmt5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034848.1 MGP_NODShiLtJ_G0019690.1 mouse_genomes_project 12 81464178 81470462 - MGP_NODShiLtJ_P0034848 Trmt5 protein_coding protein_coding MGP_NODShiLtJ_T0100019.1 MGP_NODShiLtJ_G0038413.1 mouse_genomes_project 12 122982136 122982209 + AF357425 snoRNA snoRNA MGP_NODShiLtJ_T0098785.1 MGP_NODShiLtJ_G0037179.1 mouse_genomes_project 12 122141883 122142244 - Gm22079 snRNA snRNA MGP_NODShiLtJ_T0000839.1 MGP_NODShiLtJ_G0000769.1 mouse_genomes_project 12 66015621 66033280 + TEC TEC MGP_NODShiLtJ_T0100039.1 MGP_NODShiLtJ_G0038433.1 mouse_genomes_project 12 123038802 123038870 + Gm25224 snoRNA snoRNA MGP_NODShiLtJ_T0098761.1 MGP_NODShiLtJ_G0037155.1 mouse_genomes_project 12 60186787 60186890 - Gm22296 snRNA snRNA MGP_NODShiLtJ_T0034946.1 MGP_NODShiLtJ_G0019728.1 mouse_genomes_project 12 87700973 87727925 + MGP_NODShiLtJ_P0034946 Eif2s1 protein_coding protein_coding MGP_NODShiLtJ_T0034792.1 MGP_NODShiLtJ_G0019671.1 mouse_genomes_project 12 79110370 79124043 - MGP_NODShiLtJ_P0034792 Timm9 protein_coding protein_coding MGP_NODShiLtJ_T0034793.1 MGP_NODShiLtJ_G0019671.1 mouse_genomes_project 12 79110370 79124043 - MGP_NODShiLtJ_P0034793 Timm9 protein_coding protein_coding MGP_NODShiLtJ_T0012692.1 MGP_NODShiLtJ_G0010800.1 mouse_genomes_project 12 62138138 62138576 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011230.1 MGP_NODShiLtJ_G0009363.1 mouse_genomes_project 12 122877764 122877861 + Gm27335 misc_RNA misc_RNA MGP_NODShiLtJ_T0035036.1 MGP_NODShiLtJ_G0019763.1 mouse_genomes_project 12 91419363 91719190 + MGP_NODShiLtJ_P0035036 Sipa1l1 protein_coding protein_coding MGP_NODShiLtJ_T0035037.1 MGP_NODShiLtJ_G0019763.1 mouse_genomes_project 12 91577207 91719190 + MGP_NODShiLtJ_P0035037 Sipa1l1 protein_coding protein_coding MGP_NODShiLtJ_T0034865.1 MGP_NODShiLtJ_G0019698.1 mouse_genomes_project 12 82580421 82583418 + MGP_NODShiLtJ_P0034865 Dbpht2 protein_coding protein_coding MGP_NODShiLtJ_T0003348.1 MGP_NODShiLtJ_G0003072.1 mouse_genomes_project 12 77692227 77696448 + 4930512B01Rik antisense antisense MGP_NODShiLtJ_T0003349.1 MGP_NODShiLtJ_G0003072.1 mouse_genomes_project 12 77692274 77743554 + 4930512B01Rik antisense antisense MGP_NODShiLtJ_T0006400.1 MGP_NODShiLtJ_G0005329.1 mouse_genomes_project 12 120267915 120270819 + Gm16085 lincRNA lincRNA MGP_NODShiLtJ_T0006402.1 MGP_NODShiLtJ_G0005331.1 mouse_genomes_project 12 120323559 120326739 + Gm2800 lincRNA lincRNA MGP_NODShiLtJ_T0100007.1 MGP_NODShiLtJ_G0038401.1 mouse_genomes_project 12 86823999 86824120 + Gm24994 snoRNA snoRNA MGP_NODShiLtJ_T0009716.1 MGP_NODShiLtJ_G0007849.1 mouse_genomes_project 12 85077390 85077469 - Mir5135 miRNA miRNA MGP_NODShiLtJ_T0000258.1 MGP_NODShiLtJ_G0000196.1 mouse_genomes_project 12 128786005 128786443 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035490.1 MGP_NODShiLtJ_G0019889.1 mouse_genomes_project 12 114898822 114908869 + MGP_NODShiLtJ_P0035490 Chga protein_coding protein_coding MGP_NODShiLtJ_T0100020.1 MGP_NODShiLtJ_G0038414.1 mouse_genomes_project 12 122987199 122987271 + Gm24899 snoRNA snoRNA MGP_NODShiLtJ_T0006383.1 MGP_NODShiLtJ_G0005316.1 mouse_genomes_project 12 112294901 112295728 - Gm26723 lincRNA lincRNA MGP_NODShiLtJ_T0034978.1 MGP_NODShiLtJ_G0019745.1 mouse_genomes_project 12 89663780 89704339 + MGP_NODShiLtJ_P0034978 Slc39a9 protein_coding protein_coding MGP_NODShiLtJ_T0006345.1 MGP_NODShiLtJ_G0005285.1 mouse_genomes_project 12 37314371 37336985 - lincRNA lincRNA MGP_NODShiLtJ_T0017185.1 MGP_NODShiLtJ_G0015107.1 mouse_genomes_project 12 112272563 112279453 + Gm10433 processed_transcript processed_transcript MGP_NODShiLtJ_T0017186.1 MGP_NODShiLtJ_G0015107.1 mouse_genomes_project 12 112273368 112278658 + Gm10433 processed_transcript processed_transcript MGP_NODShiLtJ_T0000034.1 MGP_NODShiLtJ_G0000028.1 mouse_genomes_project 12 127191295 127191343 - MGP_NODShiLtJ_P0000034 Ighj2 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0000035.1 MGP_NODShiLtJ_G0000028.1 mouse_genomes_project 12 127191341 127191395 - Ighj2 IG_J_gene processed_transcript MGP_NODShiLtJ_T0034202.1 MGP_NODShiLtJ_G0019445.1 mouse_genomes_project 12 6540271 6557324 + MGP_NODShiLtJ_P0034202 Laptm4a protein_coding protein_coding MGP_NODShiLtJ_T0000055.1 MGP_NODShiLtJ_G0000044.1 mouse_genomes_project 12 127377354 127377841 - MGP_NODShiLtJ_P0000055 Ighv5-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000056.1 MGP_NODShiLtJ_G0000044.1 mouse_genomes_project 12 127377354 127377841 - MGP_NODShiLtJ_P0000056 Ighv5-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034455.1 MGP_NODShiLtJ_G0019540.1 mouse_genomes_project 12 34910779 34912455 + MGP_NODShiLtJ_P0034455 Prps1l1 protein_coding protein_coding MGP_NODShiLtJ_T0035758.1 MGP_NODShiLtJ_G0019985.1 mouse_genomes_project 12 125061001 125072809 + MGP_NODShiLtJ_P0035758 Eif5 protein_coding protein_coding MGP_NODShiLtJ_T0035759.1 MGP_NODShiLtJ_G0019985.1 mouse_genomes_project 12 125063268 125072177 + MGP_NODShiLtJ_P0035759 Eif5 protein_coding protein_coding MGP_NODShiLtJ_T0035760.1 MGP_NODShiLtJ_G0019985.1 mouse_genomes_project 12 125064031 125071872 + MGP_NODShiLtJ_P0035760 Eif5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035535.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115863452 115870250 + MGP_NODShiLtJ_P0035535 Ifi27 protein_coding protein_coding MGP_NODShiLtJ_T0035536.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115863452 115870250 + MGP_NODShiLtJ_P0035536 Ifi27 protein_coding protein_coding MGP_NODShiLtJ_T0035537.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115863452 115870250 + MGP_NODShiLtJ_P0035537 Ifi27 protein_coding protein_coding MGP_NODShiLtJ_T0035538.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115863453 115870282 + MGP_NODShiLtJ_P0035538 Ifi27 protein_coding protein_coding MGP_NODShiLtJ_T0035539.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115863486 115867679 + Ifi27 protein_coding retained_intron MGP_NODShiLtJ_T0035540.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115863500 115870282 + MGP_NODShiLtJ_P0035540 Ifi27 protein_coding protein_coding MGP_NODShiLtJ_T0035541.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115863526 115867016 + Ifi27 protein_coding retained_intron MGP_NODShiLtJ_T0035542.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115863533 115867571 + MGP_NODShiLtJ_P0035542 Ifi27 protein_coding protein_coding MGP_NODShiLtJ_T0035543.1 MGP_NODShiLtJ_G0019906.1 mouse_genomes_project 12 115867669 115870282 + Ifi27 protein_coding retained_intron MGP_NODShiLtJ_T0000253.1 MGP_NODShiLtJ_G0000191.1 mouse_genomes_project 12 128641254 128641556 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035307.1 MGP_NODShiLtJ_G0019839.1 mouse_genomes_project 12 96955925 96980234 - MGP_NODShiLtJ_P0035307 Ism2 protein_coding protein_coding MGP_NODShiLtJ_T0035308.1 MGP_NODShiLtJ_G0019839.1 mouse_genomes_project 12 96956970 96964418 - MGP_NODShiLtJ_P0035308 Ism2 protein_coding protein_coding MGP_NODShiLtJ_T0035309.1 MGP_NODShiLtJ_G0019839.1 mouse_genomes_project 12 96959698 96964354 - Ism2 protein_coding processed_transcript MGP_NODShiLtJ_T0034970.1 MGP_NODShiLtJ_G0019740.1 mouse_genomes_project 12 89146960 89247395 - MGP_NODShiLtJ_P0034970 Actn1 protein_coding protein_coding MGP_NODShiLtJ_T0034971.1 MGP_NODShiLtJ_G0019740.1 mouse_genomes_project 12 89147740 89247115 - MGP_NODShiLtJ_P0034971 Actn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034972.1 MGP_NODShiLtJ_G0019740.1 mouse_genomes_project 12 89147740 89247115 - MGP_NODShiLtJ_P0034972 Actn1 protein_coding protein_coding MGP_NODShiLtJ_T0000278.1 MGP_NODShiLtJ_G0000216.1 mouse_genomes_project 12 130738545 130738978 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0101593.1 MGP_NODShiLtJ_G0039762.1 mouse_genomes_project 12 117120343 117125871 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009765.1 MGP_NODShiLtJ_G0007898.1 mouse_genomes_project 12 123062861 123062922 + Mir380 miRNA miRNA MGP_NODShiLtJ_T0035336.1 MGP_NODShiLtJ_G0019848.1 mouse_genomes_project 12 98099329 98099758 + MGP_NODShiLtJ_P0035336 Gm10264 protein_coding protein_coding MGP_NODShiLtJ_T0034180.1 MGP_NODShiLtJ_G0019441.1 mouse_genomes_project 12 6034959 6037182 - MGP_NODShiLtJ_P0034180 Rhob protein_coding protein_coding MGP_NODShiLtJ_T0000071.1 MGP_NODShiLtJ_G0000056.1 mouse_genomes_project 12 127832211 127832801 - MGP_NODShiLtJ_P0000071 Ighv7-1 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0101596.1 MGP_NODShiLtJ_G0039765.1 mouse_genomes_project 12 130679027 130679660 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006372.1 MGP_NODShiLtJ_G0005305.1 mouse_genomes_project 12 95508933 95525261 - Gm26531 lincRNA lincRNA MGP_NODShiLtJ_T0035183.1 MGP_NODShiLtJ_G0019801.1 mouse_genomes_project 12 94361391 94363755 + MGP_NODShiLtJ_P0035183 D030025P21Rik protein_coding protein_coding MGP_NODShiLtJ_T0012685.1 MGP_NODShiLtJ_G0010793.1 mouse_genomes_project 12 55544085 55544396 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000272.1 MGP_NODShiLtJ_G0000210.1 mouse_genomes_project 12 130043359 130043653 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035292.1 MGP_NODShiLtJ_G0019831.1 mouse_genomes_project 12 96748110 96753178 - MGP_NODShiLtJ_P0035292 Ngb protein_coding protein_coding MGP_NODShiLtJ_T0035293.1 MGP_NODShiLtJ_G0019831.1 mouse_genomes_project 12 96748110 96753161 - MGP_NODShiLtJ_P0035293 Ngb protein_coding protein_coding MGP_NODShiLtJ_T0035294.1 MGP_NODShiLtJ_G0019831.1 mouse_genomes_project 12 96748604 96752989 - MGP_NODShiLtJ_P0035294 Ngb protein_coding protein_coding MGP_NODShiLtJ_T0034148.1 MGP_NODShiLtJ_G0019425.1 mouse_genomes_project 12 1588182 1720337 + MGP_NODShiLtJ_P0034148 Itsn2 protein_coding protein_coding MGP_NODShiLtJ_T0034149.1 MGP_NODShiLtJ_G0019425.1 mouse_genomes_project 12 1610079 1681365 + MGP_NODShiLtJ_P0034149 Itsn2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003346.1 MGP_NODShiLtJ_G0003070.1 mouse_genomes_project 12 62086757 62115445 - 4921518K17Rik antisense antisense MGP_NODShiLtJ_T0009790.1 MGP_NODShiLtJ_G0007923.1 mouse_genomes_project 12 123085145 123085216 + Mir134 miRNA miRNA MGP_NODShiLtJ_T0101590.1 MGP_NODShiLtJ_G0039759.1 mouse_genomes_project 12 116640989 116647014 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012742.1 MGP_NODShiLtJ_G0010850.1 mouse_genomes_project 12 130221922 130222251 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035587.1 MGP_NODShiLtJ_G0019927.1 mouse_genomes_project 12 117264495 117266617 - MGP_NODShiLtJ_P0035587 Gsc protein_coding protein_coding MGP_NODShiLtJ_T0098740.1 MGP_NODShiLtJ_G0037134.1 mouse_genomes_project 12 1770084 1770191 + Gm22003 snRNA snRNA MGP_NODShiLtJ_T0035728.1 MGP_NODShiLtJ_G0019975.1 mouse_genomes_project 12 124453453 124457141 - MGP_NODShiLtJ_P0035728 Ankrd9 protein_coding protein_coding MGP_NODShiLtJ_T0035729.1 MGP_NODShiLtJ_G0019975.1 mouse_genomes_project 12 124454526 124456356 - MGP_NODShiLtJ_P0035729 Ankrd9 protein_coding protein_coding MGP_NODShiLtJ_T0035730.1 MGP_NODShiLtJ_G0019975.1 mouse_genomes_project 12 124454527 124457044 - MGP_NODShiLtJ_P0035730 Ankrd9 protein_coding protein_coding MGP_NODShiLtJ_T0035731.1 MGP_NODShiLtJ_G0019975.1 mouse_genomes_project 12 124454527 124457122 - MGP_NODShiLtJ_P0035731 Ankrd9 protein_coding protein_coding MGP_NODShiLtJ_T0035732.1 MGP_NODShiLtJ_G0019975.1 mouse_genomes_project 12 124454527 124456719 - MGP_NODShiLtJ_P0035732 Ankrd9 protein_coding protein_coding MGP_NODShiLtJ_T0035733.1 MGP_NODShiLtJ_G0019975.1 mouse_genomes_project 12 124454529 124457096 - MGP_NODShiLtJ_P0035733 Ankrd9 protein_coding protein_coding MGP_NODShiLtJ_T0035734.1 MGP_NODShiLtJ_G0019975.1 mouse_genomes_project 12 124456072 124456680 - Ankrd9 protein_coding processed_transcript MGP_NODShiLtJ_T0034420.1 MGP_NODShiLtJ_G0019528.1 mouse_genomes_project 12 31745842 31783310 - MGP_NODShiLtJ_P0034420 Pik3cg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034421.1 MGP_NODShiLtJ_G0019528.1 mouse_genomes_project 12 31746539 31783358 - MGP_NODShiLtJ_P0034421 Pik3cg protein_coding protein_coding MGP_NODShiLtJ_T0034422.1 MGP_NODShiLtJ_G0019528.1 mouse_genomes_project 12 31748833 31783169 - MGP_NODShiLtJ_P0034422 Pik3cg protein_coding protein_coding MGP_NODShiLtJ_T0034423.1 MGP_NODShiLtJ_G0019528.1 mouse_genomes_project 12 31775249 31775708 - Pik3cg protein_coding retained_intron MGP_NODShiLtJ_T0000094.1 MGP_NODShiLtJ_G0000072.1 mouse_genomes_project 12 128457880 128458182 - MGP_NODShiLtJ_P0000094 Ighv13-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000095.1 MGP_NODShiLtJ_G0000072.1 mouse_genomes_project 12 128457880 128458340 - MGP_NODShiLtJ_P0000095 Ighv13-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0006354.1 MGP_NODShiLtJ_G0005291.1 mouse_genomes_project 12 77750626 77757626 + 4931403G20Rik lincRNA lincRNA MGP_NODShiLtJ_T0034623.1 MGP_NODShiLtJ_G0019613.1 mouse_genomes_project 12 61070895 61613767 - MGP_NODShiLtJ_P0034623 Slc25a21 protein_coding protein_coding MGP_NODShiLtJ_T0034624.1 MGP_NODShiLtJ_G0019613.1 mouse_genomes_project 12 61072070 61575013 - MGP_NODShiLtJ_P0034624 Slc25a21 protein_coding protein_coding MGP_NODShiLtJ_T0034625.1 MGP_NODShiLtJ_G0019613.1 mouse_genomes_project 12 61088663 61138797 - Slc25a21 protein_coding processed_transcript MGP_NODShiLtJ_T0034626.1 MGP_NODShiLtJ_G0019613.1 mouse_genomes_project 12 61136948 61360594 - Slc25a21 protein_coding retained_intron MGP_NODShiLtJ_T0100002.1 MGP_NODShiLtJ_G0038396.1 mouse_genomes_project 12 72435094 72435226 - Gm23948 snoRNA snoRNA MGP_NODShiLtJ_T0035370.1 MGP_NODShiLtJ_G0019855.1 mouse_genomes_project 12 101763216 101808524 - MGP_NODShiLtJ_P0035370 Gtf2a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009814.1 MGP_NODShiLtJ_G0007947.1 mouse_genomes_project 12 128681301 128681361 - Mir7094-2 miRNA miRNA MGP_NODShiLtJ_T0009743.1 MGP_NODShiLtJ_G0007876.1 mouse_genomes_project 12 122927475 122927536 - Mir3544 miRNA miRNA MGP_NODShiLtJ_T0034627.1 MGP_NODShiLtJ_G0019614.1 mouse_genomes_project 12 61652740 61664922 + MGP_NODShiLtJ_P0034627 Prps1l3 protein_coding protein_coding MGP_NODShiLtJ_T0100009.1 MGP_NODShiLtJ_G0038403.1 mouse_genomes_project 12 92058175 92058311 - Gm22149 snoRNA snoRNA MGP_NODShiLtJ_T0034620.1 MGP_NODShiLtJ_G0019612.1 mouse_genomes_project 12 61047635 61070969 + MGP_NODShiLtJ_P0034620 Pax9 protein_coding protein_coding MGP_NODShiLtJ_T0034621.1 MGP_NODShiLtJ_G0019612.1 mouse_genomes_project 12 61051516 61071084 + MGP_NODShiLtJ_P0034621 Pax9 protein_coding protein_coding MGP_NODShiLtJ_T0034622.1 MGP_NODShiLtJ_G0019612.1 mouse_genomes_project 12 61051606 61067752 + Pax9 protein_coding retained_intron MGP_NODShiLtJ_T0034235.1 MGP_NODShiLtJ_G0019465.1 mouse_genomes_project 12 12744455 12745187 + MGP_NODShiLtJ_P0034235 Gm9847 protein_coding protein_coding MGP_NODShiLtJ_T0009805.1 MGP_NODShiLtJ_G0007938.1 mouse_genomes_project 12 124106583 124106686 + Gm27299 miRNA miRNA MGP_NODShiLtJ_T0012732.1 MGP_NODShiLtJ_G0010840.1 mouse_genomes_project 12 120346344 120347335 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034915.1 MGP_NODShiLtJ_G0019717.1 mouse_genomes_project 12 85129035 85273298 - MGP_NODShiLtJ_P0034915 Sptb protein_coding protein_coding MGP_NODShiLtJ_T0034916.1 MGP_NODShiLtJ_G0019717.1 mouse_genomes_project 12 85131778 85132634 - Sptb protein_coding retained_intron MGP_NODShiLtJ_T0034917.1 MGP_NODShiLtJ_G0019717.1 mouse_genomes_project 12 85144641 85272774 - MGP_NODShiLtJ_P0034917 Sptb protein_coding protein_coding MGP_NODShiLtJ_T0035607.1 MGP_NODShiLtJ_G0019940.1 mouse_genomes_project 12 118545380 118579526 + MGP_NODShiLtJ_P0035607 Bdkrb2 protein_coding protein_coding MGP_NODShiLtJ_T0034568.1 MGP_NODShiLtJ_G0019585.1 mouse_genomes_project 12 55908652 56158250 + MGP_NODShiLtJ_P0034568 Nubpl protein_coding protein_coding MGP_NODShiLtJ_T0034569.1 MGP_NODShiLtJ_G0019585.1 mouse_genomes_project 12 55908671 55959690 + Nubpl protein_coding retained_intron MGP_NODShiLtJ_T0034570.1 MGP_NODShiLtJ_G0019585.1 mouse_genomes_project 12 55908676 55911993 + Nubpl protein_coding retained_intron MGP_NODShiLtJ_T0034571.1 MGP_NODShiLtJ_G0019585.1 mouse_genomes_project 12 55940358 56145066 + MGP_NODShiLtJ_P0034571 Nubpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000267.1 MGP_NODShiLtJ_G0000205.1 mouse_genomes_project 12 129503694 129504128 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0099978.1 MGP_NODShiLtJ_G0038372.1 mouse_genomes_project 12 23763492 23763621 + Gm26211 snoRNA snoRNA MGP_NODShiLtJ_T0035647.1 MGP_NODShiLtJ_G0019950.1 mouse_genomes_project 12 121389075 121415941 + MGP_NODShiLtJ_P0035647 Ccnk protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035648.1 MGP_NODShiLtJ_G0019950.1 mouse_genomes_project 12 121389316 121416599 + MGP_NODShiLtJ_P0035648 Ccnk protein_coding protein_coding MGP_NODShiLtJ_T0034559.1 MGP_NODShiLtJ_G0019579.1 mouse_genomes_project 12 55373987 55467049 - MGP_NODShiLtJ_P0034559 Strn3 protein_coding protein_coding MGP_NODShiLtJ_T0034560.1 MGP_NODShiLtJ_G0019579.1 mouse_genomes_project 12 55373987 55467049 - MGP_NODShiLtJ_P0034560 Strn3 protein_coding protein_coding MGP_NODShiLtJ_T0009712.1 MGP_NODShiLtJ_G0007845.1 mouse_genomes_project 12 77661019 77661129 - Mir681 miRNA miRNA MGP_NODShiLtJ_T0000113.1 MGP_NODShiLtJ_G0000086.1 mouse_genomes_project 12 128768679 128769113 - MGP_NODShiLtJ_P0000113 Ighv1-9 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000114.1 MGP_NODShiLtJ_G0000086.1 mouse_genomes_project 12 128768679 128769113 - MGP_NODShiLtJ_P0000114 Ighv1-9 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0009690.1 MGP_NODShiLtJ_G0007823.1 mouse_genomes_project 12 13449892 13449991 - Gm27682 miRNA miRNA MGP_NODShiLtJ_T0000025.1 MGP_NODShiLtJ_G0000019.1 mouse_genomes_project 12 127209437 127209447 - MGP_NODShiLtJ_P0000025 Ighd5-5 IG_D_gene IG_D_gene MGP_NODShiLtJ_T0034974.1 MGP_NODShiLtJ_G0019742.1 mouse_genomes_project 12 89465424 89506624 + MGP_NODShiLtJ_P0034974 Exd2 protein_coding protein_coding MGP_NODShiLtJ_T0034075.1 MGP_NODShiLtJ_G0019411.1 mouse_genomes_project 12 66101 138752 - MGP_NODShiLtJ_P0034075 Rab10 protein_coding protein_coding MGP_NODShiLtJ_T0034347.1 MGP_NODShiLtJ_G0019504.1 mouse_genomes_project 12 27963020 27972761 + MGP_NODShiLtJ_P0034347 Adi1 protein_coding protein_coding MGP_NODShiLtJ_T0034348.1 MGP_NODShiLtJ_G0019504.1 mouse_genomes_project 12 27963279 27972314 + MGP_NODShiLtJ_P0034348 Adi1 protein_coding protein_coding MGP_NODShiLtJ_T0034349.1 MGP_NODShiLtJ_G0019504.1 mouse_genomes_project 12 27967283 27970329 + Adi1 protein_coding processed_transcript MGP_NODShiLtJ_T0034307.1 MGP_NODShiLtJ_G0019487.1 mouse_genomes_project 12 23427917 23519776 + MGP_NODShiLtJ_P0034307 Taf1b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009705.1 MGP_NODShiLtJ_G0007838.1 mouse_genomes_project 12 60094726 60094817 - Gm23394 miRNA miRNA MGP_NODShiLtJ_T0012707.1 MGP_NODShiLtJ_G0010815.1 mouse_genomes_project 12 89077311 89078206 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006438.1 MGP_NODShiLtJ_G0005344.1 mouse_genomes_project 12 124936316 124940389 - Gm10425 lincRNA lincRNA MGP_NODShiLtJ_T0098758.1 MGP_NODShiLtJ_G0037152.1 mouse_genomes_project 12 58826960 58827124 - Gm24305 snRNA snRNA MGP_NODShiLtJ_T0035575.1 MGP_NODShiLtJ_G0019921.1 mouse_genomes_project 12 116842558 116858121 + Serpina3g protein_coding processed_transcript MGP_NODShiLtJ_T0035576.1 MGP_NODShiLtJ_G0019921.1 mouse_genomes_project 12 116842572 116859191 + MGP_NODShiLtJ_P0035576 Serpina3g protein_coding protein_coding MGP_NODShiLtJ_T0035577.1 MGP_NODShiLtJ_G0019921.1 mouse_genomes_project 12 116842573 116858185 + MGP_NODShiLtJ_P0035577 Serpina3g protein_coding protein_coding MGP_NODShiLtJ_T0035578.1 MGP_NODShiLtJ_G0019921.1 mouse_genomes_project 12 116844684 116890214 + MGP_NODShiLtJ_P0035578 Serpina3g protein_coding protein_coding MGP_NODShiLtJ_T0000061.1 MGP_NODShiLtJ_G0000049.1 mouse_genomes_project 12 127634288 127634748 - MGP_NODShiLtJ_P0000061 Ighv5-9-1 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000062.1 MGP_NODShiLtJ_G0000049.1 mouse_genomes_project 12 127634288 127634808 - MGP_NODShiLtJ_P0000062 Ighv5-9-1 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0003336.1 MGP_NODShiLtJ_G0003062.1 mouse_genomes_project 12 32846005 32865501 - antisense antisense MGP_NODShiLtJ_T0034110.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 712924 748727 + Dnmt3a protein_coding retained_intron MGP_NODShiLtJ_T0034111.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 713261 782975 + Dnmt3a protein_coding retained_intron MGP_NODShiLtJ_T0034112.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 713261 788872 + MGP_NODShiLtJ_P0034112 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034113.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 713810 812430 + MGP_NODShiLtJ_P0034113 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034114.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 745125 822917 + MGP_NODShiLtJ_P0034114 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034115.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 760274 823057 + MGP_NODShiLtJ_P0034115 Dnmt3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034116.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 776075 781217 + MGP_NODShiLtJ_P0034116 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034117.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 781245 791553 + MGP_NODShiLtJ_P0034117 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034118.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 800944 811556 + MGP_NODShiLtJ_P0034118 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034119.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 807162 823012 + MGP_NODShiLtJ_P0034119 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034120.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 810258 811111 + MGP_NODShiLtJ_P0034120 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034121.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 810303 812411 + MGP_NODShiLtJ_P0034121 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034122.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 811027 812800 + MGP_NODShiLtJ_P0034122 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0034123.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 812854 815032 + Dnmt3a protein_coding retained_intron MGP_NODShiLtJ_T0034124.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 815627 821962 + MGP_NODShiLtJ_P0034124 Dnmt3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034125.1 MGP_NODShiLtJ_G0019415.1 mouse_genomes_project 12 821985 823717 + MGP_NODShiLtJ_P0034125 Dnmt3a protein_coding protein_coding MGP_NODShiLtJ_T0009764.1 MGP_NODShiLtJ_G0007897.1 mouse_genomes_project 12 123062837 123062949 - Gm25750 miRNA miRNA MGP_NODShiLtJ_T0098743.1 MGP_NODShiLtJ_G0037137.1 mouse_genomes_project 12 10756414 10756521 + Gm25538 snRNA snRNA MGP_NODShiLtJ_T0034944.1 MGP_NODShiLtJ_G0019726.1 mouse_genomes_project 12 87566321 87675359 + MGP_NODShiLtJ_P0034944 Mpp5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000079.1 MGP_NODShiLtJ_G0000063.1 mouse_genomes_project 12 128124229 128133471 - MGP_NODShiLtJ_P0000079 Ighv9-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000274.1 MGP_NODShiLtJ_G0000212.1 mouse_genomes_project 12 130285714 130286008 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034234.1 MGP_NODShiLtJ_G0019464.1 mouse_genomes_project 12 12333790 12338230 - MGP_NODShiLtJ_P0034234 Fam84a protein_coding protein_coding MGP_NODShiLtJ_T0098269.1 MGP_NODShiLtJ_G0036677.1 mouse_genomes_project 12 94410491 94411462 - Gm17193 sense_intronic sense_intronic MGP_NODShiLtJ_T0003353.1 MGP_NODShiLtJ_G0003075.1 mouse_genomes_project 12 88925078 88925383 + Gm28056 antisense antisense MGP_NODShiLtJ_T0012686.1 MGP_NODShiLtJ_G0010794.1 mouse_genomes_project 12 58773928 58775553 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035586.1 MGP_NODShiLtJ_G0019926.1 mouse_genomes_project 12 117193304 117202558 + MGP_NODShiLtJ_P0035586 Serpina3n protein_coding protein_coding MGP_NODShiLtJ_T0035340.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98577579 99153664 + Nrxn3 protein_coding retained_intron MGP_NODShiLtJ_T0035341.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98577591 98708929 + Nrxn3 protein_coding retained_intron MGP_NODShiLtJ_T0035342.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98577615 98711209 + MGP_NODShiLtJ_P0035342 Nrxn3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035343.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98577689 100374271 + MGP_NODShiLtJ_P0035343 Nrxn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035344.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98577812 100374321 + MGP_NODShiLtJ_P0035344 Nrxn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035345.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98579756 98650432 + Nrxn3 protein_coding processed_transcript MGP_NODShiLtJ_T0035346.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98580428 98650298 + Nrxn3 protein_coding processed_transcript MGP_NODShiLtJ_T0035347.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98649820 100376338 + MGP_NODShiLtJ_P0035347 Nrxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035348.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98650755 98711332 + Nrxn3 protein_coding processed_transcript MGP_NODShiLtJ_T0035349.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98820116 99072170 + Nrxn3 protein_coding processed_transcript MGP_NODShiLtJ_T0035350.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 98820125 100374484 + MGP_NODShiLtJ_P0035350 Nrxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035351.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 99077955 100373803 + MGP_NODShiLtJ_P0035351 Nrxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035352.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 99780172 100374323 + MGP_NODShiLtJ_P0035352 Nrxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035353.1 MGP_NODShiLtJ_G0019851.1 mouse_genomes_project 12 99780172 100374867 + MGP_NODShiLtJ_P0035353 Nrxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035233.1 MGP_NODShiLtJ_G0019818.1 mouse_genomes_project 12 95281624 95354081 + MGP_NODShiLtJ_P0035233 Mfsd7c protein_coding protein_coding MGP_NODShiLtJ_T0035596.1 MGP_NODShiLtJ_G0019935.1 mouse_genomes_project 12 118022635 118046049 + MGP_NODShiLtJ_P0035596 Tcl1b1 protein_coding protein_coding MGP_NODShiLtJ_T0034346.1 MGP_NODShiLtJ_G0019503.1 mouse_genomes_project 12 27935896 27945776 + MGP_NODShiLtJ_P0034346 Rnaseh1 protein_coding protein_coding MGP_NODShiLtJ_T0000033.1 MGP_NODShiLtJ_G0000027.1 mouse_genomes_project 12 127190912 127190960 - MGP_NODShiLtJ_P0000033 Ighj3 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0101580.1 MGP_NODShiLtJ_G0039750.1 mouse_genomes_project 12 52132956 52133196 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098769.1 MGP_NODShiLtJ_G0037163.1 mouse_genomes_project 12 77458545 77458651 - Gm24449 snRNA snRNA MGP_NODShiLtJ_T0035813.1 MGP_NODShiLtJ_G0020001.1 mouse_genomes_project 12 126128236 126138716 + MGP_NODShiLtJ_P0035813 A530016L24Rik protein_coding protein_coding MGP_NODShiLtJ_T0034912.1 MGP_NODShiLtJ_G0019715.1 mouse_genomes_project 12 84976267 84983044 + MGP_NODShiLtJ_P0034912 Gm10451 protein_coding protein_coding MGP_NODShiLtJ_T0035315.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97120156 97123733 - Alkbh1 protein_coding processed_transcript MGP_NODShiLtJ_T0035316.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97120485 97138123 - MGP_NODShiLtJ_P0035316 Alkbh1 protein_coding protein_coding MGP_NODShiLtJ_T0035317.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97122392 97138110 - MGP_NODShiLtJ_P0035317 Alkbh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035318.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97122392 97138112 - MGP_NODShiLtJ_P0035318 Alkbh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035319.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97122395 97138120 - MGP_NODShiLtJ_P0035319 Alkbh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035320.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97123105 97138112 - MGP_NODShiLtJ_P0035320 Alkbh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035321.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97123416 97132854 - MGP_NODShiLtJ_P0035321 Alkbh1 protein_coding protein_coding MGP_NODShiLtJ_T0035322.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97125726 97136021 - Alkbh1 protein_coding processed_transcript MGP_NODShiLtJ_T0035323.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97127532 97138117 - MGP_NODShiLtJ_P0035323 Alkbh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035324.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97127543 97138123 - Alkbh1 protein_coding retained_intron MGP_NODShiLtJ_T0035325.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97136974 97138301 - Alkbh1 protein_coding retained_intron MGP_NODShiLtJ_T0035326.1 MGP_NODShiLtJ_G0019841.1 mouse_genomes_project 12 97137794 97138202 - MGP_NODShiLtJ_P0035326 Alkbh1 protein_coding protein_coding MGP_NODShiLtJ_T0034828.1 MGP_NODShiLtJ_G0019683.1 mouse_genomes_project 12 80749597 80765603 - MGP_NODShiLtJ_P0034828 Dhrs7 protein_coding protein_coding MGP_NODShiLtJ_T0097752.1 MGP_NODShiLtJ_G0036164.1 mouse_genomes_project 12 60094274 60095244 + pseudogene pseudogene MGP_NODShiLtJ_T0034800.1 MGP_NODShiLtJ_G0019674.1 mouse_genomes_project 12 79851310 80013363 + MGP_NODShiLtJ_P0034800 Daam1 protein_coding protein_coding MGP_NODShiLtJ_T0034402.1 MGP_NODShiLtJ_G0019521.1 mouse_genomes_project 12 31017454 31061624 - MGP_NODShiLtJ_P0034402 Slc26a4 protein_coding protein_coding MGP_NODShiLtJ_T0011227.1 MGP_NODShiLtJ_G0009360.1 mouse_genomes_project 12 115530034 115530196 + Gm27976 misc_RNA misc_RNA MGP_NODShiLtJ_T0034549.1 MGP_NODShiLtJ_G0019574.1 mouse_genomes_project 12 52716420 52716981 + MGP_NODShiLtJ_P0034549 Gm9804 protein_coding protein_coding MGP_NODShiLtJ_T0098741.1 MGP_NODShiLtJ_G0037135.1 mouse_genomes_project 12 2030247 2030350 - Gm23167 snRNA snRNA MGP_NODShiLtJ_T0035640.1 MGP_NODShiLtJ_G0019949.1 mouse_genomes_project 12 121287349 121387734 - MGP_NODShiLtJ_P0035640 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035641.1 MGP_NODShiLtJ_G0019949.1 mouse_genomes_project 12 121306557 121387734 - MGP_NODShiLtJ_P0035641 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035642.1 MGP_NODShiLtJ_G0019949.1 mouse_genomes_project 12 121316284 121319233 - protein_coding processed_transcript MGP_NODShiLtJ_T0035643.1 MGP_NODShiLtJ_G0019949.1 mouse_genomes_project 12 121320927 121387689 - MGP_NODShiLtJ_P0035643 protein_coding protein_coding MGP_NODShiLtJ_T0035644.1 MGP_NODShiLtJ_G0019949.1 mouse_genomes_project 12 121321186 121387742 - MGP_NODShiLtJ_P0035644 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035645.1 MGP_NODShiLtJ_G0019949.1 mouse_genomes_project 12 121322445 121368778 - protein_coding processed_transcript MGP_NODShiLtJ_T0035646.1 MGP_NODShiLtJ_G0019949.1 mouse_genomes_project 12 121363763 121387686 - MGP_NODShiLtJ_P0035646 protein_coding protein_coding MGP_NODShiLtJ_T0101048.1 MGP_NODShiLtJ_G0039418.1 mouse_genomes_project 12 113307806 113311471 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101049.1 MGP_NODShiLtJ_G0039418.1 mouse_genomes_project 12 113311299 113311951 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0034233.1 MGP_NODShiLtJ_G0019463.1 mouse_genomes_project 12 11385761 11725219 + MGP_NODShiLtJ_P0034233 Nbas protein_coding protein_coding MGP_NODShiLtJ_T0035006.1 MGP_NODShiLtJ_G0019753.1 mouse_genomes_project 12 90451121 90669327 - MGP_NODShiLtJ_P0035006 Gm20498 protein_coding protein_coding MGP_NODShiLtJ_T0035011.1 MGP_NODShiLtJ_G0019753.1 mouse_genomes_project 12 90595642 90669304 - MGP_NODShiLtJ_P0035011 Gm20498 protein_coding protein_coding MGP_NODShiLtJ_T0035018.1 MGP_NODShiLtJ_G0019753.1 mouse_genomes_project 12 90599598 90669299 - MGP_NODShiLtJ_P0035018 Gm20498 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035019.1 MGP_NODShiLtJ_G0019753.1 mouse_genomes_project 12 90599634 90669183 - Gm20498 protein_coding processed_transcript MGP_NODShiLtJ_T0035020.1 MGP_NODShiLtJ_G0019753.1 mouse_genomes_project 12 90599656 90669299 - Gm20498 protein_coding processed_transcript MGP_NODShiLtJ_T0035022.1 MGP_NODShiLtJ_G0019753.1 mouse_genomes_project 12 90607267 90669299 - Gm20498 protein_coding processed_transcript MGP_NODShiLtJ_T0009813.1 MGP_NODShiLtJ_G0007946.1 mouse_genomes_project 12 128628212 128628272 - Mir7094-1 miRNA miRNA MGP_NODShiLtJ_T0098753.1 MGP_NODShiLtJ_G0037147.1 mouse_genomes_project 12 56507770 56507877 - Gm23296 snRNA snRNA MGP_NODShiLtJ_T0003355.1 MGP_NODShiLtJ_G0003077.1 mouse_genomes_project 12 90314394 90329325 + Gm3693 antisense antisense MGP_NODShiLtJ_T0009706.1 MGP_NODShiLtJ_G0007839.1 mouse_genomes_project 12 63972859 63972929 - Gm27284 miRNA miRNA MGP_NODShiLtJ_T0097918.1 MGP_NODShiLtJ_G0036330.1 mouse_genomes_project 12 91864744 91864847 - n-R5s63 rRNA rRNA MGP_NODShiLtJ_T0100022.1 MGP_NODShiLtJ_G0038416.1 mouse_genomes_project 12 122992288 122992362 + Gm24895 snoRNA snoRNA MGP_NODShiLtJ_T0000257.1 MGP_NODShiLtJ_G0000195.1 mouse_genomes_project 12 128725291 128725584 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035414.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111214279 111424819 - MGP_NODShiLtJ_P0035414 Foxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035415.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111214393 111424094 - MGP_NODShiLtJ_P0035415 Foxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035416.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111214393 111485753 - MGP_NODShiLtJ_P0035416 Foxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035417.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111216086 111313429 - MGP_NODShiLtJ_P0035417 Foxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035418.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111229783 111313428 - MGP_NODShiLtJ_P0035418 Foxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035419.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111313414 111385279 - Foxn3 protein_coding processed_transcript MGP_NODShiLtJ_T0035420.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111367613 111446096 - MGP_NODShiLtJ_P0035420 Foxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035421.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111416398 111485776 - Foxn3 protein_coding retained_intron MGP_NODShiLtJ_T0035422.1 MGP_NODShiLtJ_G0019868.1 mouse_genomes_project 12 111417426 111485790 - MGP_NODShiLtJ_P0035422 Foxn3 protein_coding protein_coding MGP_NODShiLtJ_T0101585.1 MGP_NODShiLtJ_G0039754.1 mouse_genomes_project 12 116269738 116340203 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000093.1 MGP_NODShiLtJ_G0000071.1 mouse_genomes_project 12 128418768 128419243 - MGP_NODShiLtJ_P0000093 Ighv3-8 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0006387.1 MGP_NODShiLtJ_G0005320.1 mouse_genomes_project 12 117748590 117749302 - Gm28875 lincRNA lincRNA MGP_NODShiLtJ_T0034337.1 MGP_NODShiLtJ_G0019498.1 mouse_genomes_project 12 26479615 26488977 - MGP_NODShiLtJ_P0034337 Sox11 protein_coding protein_coding MGP_NODShiLtJ_T0035838.1 MGP_NODShiLtJ_G0020011.1 mouse_genomes_project 12 126473001 126479745 + MGP_NODShiLtJ_P0035838 BC022687 protein_coding protein_coding MGP_NODShiLtJ_T0035839.1 MGP_NODShiLtJ_G0020011.1 mouse_genomes_project 12 126473001 126480280 + MGP_NODShiLtJ_P0035839 BC022687 protein_coding protein_coding MGP_NODShiLtJ_T0006406.1 MGP_NODShiLtJ_G0005334.1 mouse_genomes_project 12 121546485 121564726 - 4930478K11Rik lincRNA lincRNA MGP_NODShiLtJ_T0098773.1 MGP_NODShiLtJ_G0037167.1 mouse_genomes_project 12 86003313 86003412 + Gm24775 snRNA snRNA MGP_NODShiLtJ_T0034217.1 MGP_NODShiLtJ_G0019451.1 mouse_genomes_project 12 8202626 8207372 + MGP_NODShiLtJ_P0034217 Rdh14 protein_coding protein_coding MGP_NODShiLtJ_T0034375.1 MGP_NODShiLtJ_G0019513.1 mouse_genomes_project 12 30307242 30325771 - MGP_NODShiLtJ_P0034375 Acp1 protein_coding protein_coding MGP_NODShiLtJ_T0012694.1 MGP_NODShiLtJ_G0010802.1 mouse_genomes_project 12 66711790 66712763 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098749.1 MGP_NODShiLtJ_G0037143.1 mouse_genomes_project 12 35416263 35416370 + Gm26071 snRNA snRNA MGP_NODShiLtJ_T0035849.1 MGP_NODShiLtJ_G0020020.1 mouse_genomes_project 12 126768776 126782971 + MGP_NODShiLtJ_P0035849 Tex22 protein_coding protein_coding MGP_NODShiLtJ_T0035850.1 MGP_NODShiLtJ_G0020020.1 mouse_genomes_project 12 126768776 126782969 + MGP_NODShiLtJ_P0035850 Tex22 protein_coding protein_coding MGP_NODShiLtJ_T0035851.1 MGP_NODShiLtJ_G0020020.1 mouse_genomes_project 12 126769030 126782972 + MGP_NODShiLtJ_P0035851 Tex22 protein_coding protein_coding MGP_NODShiLtJ_T0035852.1 MGP_NODShiLtJ_G0020020.1 mouse_genomes_project 12 126769052 126769646 + MGP_NODShiLtJ_P0035852 Tex22 protein_coding protein_coding MGP_NODShiLtJ_T0035532.1 MGP_NODShiLtJ_G0019904.1 mouse_genomes_project 12 115834772 115835771 - MGP_NODShiLtJ_P0035532 9330161L09Rik protein_coding protein_coding MGP_NODShiLtJ_T0034798.1 MGP_NODShiLtJ_G0019673.1 mouse_genomes_project 12 79295557 79305830 + MGP_NODShiLtJ_P0034798 Dact1 protein_coding protein_coding MGP_NODShiLtJ_T0034799.1 MGP_NODShiLtJ_G0019673.1 mouse_genomes_project 12 79295657 79304617 + MGP_NODShiLtJ_P0034799 Dact1 protein_coding protein_coding MGP_NODShiLtJ_T0035637.1 MGP_NODShiLtJ_G0019948.1 mouse_genomes_project 12 121110222 121207902 - MGP_NODShiLtJ_P0035637 Bcl11b protein_coding protein_coding MGP_NODShiLtJ_T0035638.1 MGP_NODShiLtJ_G0019948.1 mouse_genomes_project 12 121114987 121207714 - MGP_NODShiLtJ_P0035638 Bcl11b protein_coding protein_coding MGP_NODShiLtJ_T0035639.1 MGP_NODShiLtJ_G0019948.1 mouse_genomes_project 12 121114987 121207714 - MGP_NODShiLtJ_P0035639 Bcl11b protein_coding protein_coding MGP_NODShiLtJ_T0034343.1 MGP_NODShiLtJ_G0019501.1 mouse_genomes_project 12 27866675 27901546 - MGP_NODShiLtJ_P0034343 Colec11 protein_coding protein_coding MGP_NODShiLtJ_T0034872.1 MGP_NODShiLtJ_G0019702.1 mouse_genomes_project 12 83843756 83848816 - MGP_NODShiLtJ_P0034872 Gphb5 protein_coding protein_coding MGP_NODShiLtJ_T0012698.1 MGP_NODShiLtJ_G0010806.1 mouse_genomes_project 12 73355225 73355864 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000277.1 MGP_NODShiLtJ_G0000215.1 mouse_genomes_project 12 130738544 130738978 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000248.1 MGP_NODShiLtJ_G0000186.1 mouse_genomes_project 12 128410627 128411060 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000851.1 MGP_NODShiLtJ_G0000781.1 mouse_genomes_project 12 126340947 126343550 - TEC TEC MGP_NODShiLtJ_T0035911.1 MGP_NODShiLtJ_G0020037.1 mouse_genomes_project 12 133860045 133963041 - MGP_NODShiLtJ_P0035911 Abcb5 protein_coding protein_coding MGP_NODShiLtJ_T0035912.1 MGP_NODShiLtJ_G0020037.1 mouse_genomes_project 12 133881643 133886263 - Abcb5 protein_coding retained_intron MGP_NODShiLtJ_T0035913.1 MGP_NODShiLtJ_G0020037.1 mouse_genomes_project 12 133882116 133920743 - Abcb5 protein_coding processed_transcript MGP_NODShiLtJ_T0034741.1 MGP_NODShiLtJ_G0019656.1 mouse_genomes_project 12 77642734 77693214 - MGP_NODShiLtJ_P0034741 Cdkl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035208.1 MGP_NODShiLtJ_G0019808.1 mouse_genomes_project 12 94672133 94682470 - MGP_NODShiLtJ_P0035208 Pgf protein_coding protein_coding MGP_NODShiLtJ_T0000270.1 MGP_NODShiLtJ_G0000208.1 mouse_genomes_project 12 129551448 129551743 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034774.1 MGP_NODShiLtJ_G0019665.1 mouse_genomes_project 12 78403252 78419051 + MGP_NODShiLtJ_P0034774 Tmx1 protein_coding protein_coding MGP_NODShiLtJ_T0034775.1 MGP_NODShiLtJ_G0019665.1 mouse_genomes_project 12 78406188 78417264 + MGP_NODShiLtJ_P0034775 Tmx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034776.1 MGP_NODShiLtJ_G0019665.1 mouse_genomes_project 12 78409991 78410727 + Tmx1 protein_coding retained_intron MGP_NODShiLtJ_T0035761.1 MGP_NODShiLtJ_G0019986.1 mouse_genomes_project 12 125106845 125195145 + MGP_NODShiLtJ_P0035761 Mark3 protein_coding protein_coding MGP_NODShiLtJ_T0035762.1 MGP_NODShiLtJ_G0019986.1 mouse_genomes_project 12 125106845 125195145 + MGP_NODShiLtJ_P0035762 Mark3 protein_coding protein_coding MGP_NODShiLtJ_T0035763.1 MGP_NODShiLtJ_G0019986.1 mouse_genomes_project 12 125151056 125195141 + MGP_NODShiLtJ_P0035763 Mark3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012703.1 MGP_NODShiLtJ_G0010811.1 mouse_genomes_project 12 82638497 82641215 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100024.1 MGP_NODShiLtJ_G0038418.1 mouse_genomes_project 12 122998202 122998275 + DQ267101 snoRNA snoRNA MGP_NODShiLtJ_T0011215.1 MGP_NODShiLtJ_G0009348.1 mouse_genomes_project 12 60586392 60586677 - Gm24685 misc_RNA misc_RNA MGP_NODShiLtJ_T0034855.1 MGP_NODShiLtJ_G0019693.1 mouse_genomes_project 12 81749154 81752436 - MGP_NODShiLtJ_P0034855 Tmem30b protein_coding protein_coding MGP_NODShiLtJ_T0006339.1 MGP_NODShiLtJ_G0005280.1 mouse_genomes_project 12 29841451 29845712 - Gm28806 lincRNA lincRNA MGP_NODShiLtJ_T0009763.1 MGP_NODShiLtJ_G0007896.1 mouse_genomes_project 12 123061703 123061752 - Mir299b miRNA miRNA MGP_NODShiLtJ_T0012731.1 MGP_NODShiLtJ_G0010839.1 mouse_genomes_project 12 120006479 120006960 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003330.1 MGP_NODShiLtJ_G0003057.1 mouse_genomes_project 12 246543 267729 - 1110002L01Rik antisense antisense MGP_NODShiLtJ_T0003331.1 MGP_NODShiLtJ_G0003057.1 mouse_genomes_project 12 247061 267762 - 1110002L01Rik antisense antisense MGP_NODShiLtJ_T0034147.1 MGP_NODShiLtJ_G0019424.1 mouse_genomes_project 12 1588000 1588102 - MGP_NODShiLtJ_P0034147 Gm3625 protein_coding protein_coding MGP_NODShiLtJ_T0034336.1 MGP_NODShiLtJ_G0019497.1 mouse_genomes_project 12 25554716 25565443 + MGP_NODShiLtJ_P0034336 Cmpk2 protein_coding protein_coding MGP_NODShiLtJ_T0006364.1 MGP_NODShiLtJ_G0005297.1 mouse_genomes_project 12 89074694 89082131 + Gm26669 lincRNA lincRNA MGP_NODShiLtJ_T0097913.1 MGP_NODShiLtJ_G0036325.1 mouse_genomes_project 12 58736210 58736320 - Gm24971 rRNA rRNA MGP_NODShiLtJ_T0034983.1 MGP_NODShiLtJ_G0019747.1 mouse_genomes_project 12 89777712 89784208 - MGP_NODShiLtJ_P0034983 Ccdc177 protein_coding protein_coding MGP_NODShiLtJ_T0034426.1 MGP_NODShiLtJ_G0019531.1 mouse_genomes_project 12 32584258 32621963 + MGP_NODShiLtJ_P0034426 Sypl protein_coding protein_coding MGP_NODShiLtJ_T0034427.1 MGP_NODShiLtJ_G0019531.1 mouse_genomes_project 12 32584551 32619817 + MGP_NODShiLtJ_P0034427 Sypl protein_coding protein_coding MGP_NODShiLtJ_T0034428.1 MGP_NODShiLtJ_G0019531.1 mouse_genomes_project 12 32584614 32617055 + MGP_NODShiLtJ_P0034428 Sypl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034429.1 MGP_NODShiLtJ_G0019531.1 mouse_genomes_project 12 32584926 32598192 + Sypl protein_coding processed_transcript MGP_NODShiLtJ_T0034430.1 MGP_NODShiLtJ_G0019531.1 mouse_genomes_project 12 32595778 32611771 + Sypl protein_coding retained_intron MGP_NODShiLtJ_T0034431.1 MGP_NODShiLtJ_G0019531.1 mouse_genomes_project 12 32595858 32610889 + Sypl protein_coding processed_transcript MGP_NODShiLtJ_T0100013.1 MGP_NODShiLtJ_G0038407.1 mouse_genomes_project 12 114568089 114568305 - Gm25203 snoRNA snoRNA MGP_NODShiLtJ_T0012726.1 MGP_NODShiLtJ_G0010834.1 mouse_genomes_project 12 116097939 116098597 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035683.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122777639 122780413 + Dlk1 protein_coding retained_intron MGP_NODShiLtJ_T0035684.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122777669 122789978 + MGP_NODShiLtJ_P0035684 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0035685.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122780085 122787337 + MGP_NODShiLtJ_P0035685 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0035686.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122780121 122787018 + MGP_NODShiLtJ_P0035686 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0035687.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122780121 122787255 + MGP_NODShiLtJ_P0035687 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0035688.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122780165 122789978 + MGP_NODShiLtJ_P0035688 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0035689.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122780285 122789978 + MGP_NODShiLtJ_P0035689 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0035690.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122780290 122786997 + MGP_NODShiLtJ_P0035690 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0035691.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122780823 122786399 + MGP_NODShiLtJ_P0035691 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0035692.1 MGP_NODShiLtJ_G0019963.1 mouse_genomes_project 12 122786479 122787112 + MGP_NODShiLtJ_P0035692 Dlk1 protein_coding protein_coding MGP_NODShiLtJ_T0000837.1 MGP_NODShiLtJ_G0000767.1 mouse_genomes_project 12 60962827 60963691 - TEC TEC MGP_NODShiLtJ_T0034374.1 MGP_NODShiLtJ_G0019512.1 mouse_genomes_project 12 30294296 30303932 + MGP_NODShiLtJ_P0034374 Fam150b protein_coding protein_coding MGP_NODShiLtJ_T0034179.1 MGP_NODShiLtJ_G0019440.1 mouse_genomes_project 12 5841112 5873248 + MGP_NODShiLtJ_P0034179 Hs1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0006370.1 MGP_NODShiLtJ_G0005303.1 mouse_genomes_project 12 92988485 92989450 + Gm26623 lincRNA lincRNA MGP_NODShiLtJ_T0034470.1 MGP_NODShiLtJ_G0019548.1 mouse_genomes_project 12 36195587 36239762 + MGP_NODShiLtJ_P0034470 Ankmy2 protein_coding protein_coding MGP_NODShiLtJ_T0097750.1 MGP_NODShiLtJ_G0036162.1 mouse_genomes_project 12 7105137 7105691 + pseudogene pseudogene MGP_NODShiLtJ_T0034643.1 MGP_NODShiLtJ_G0019619.1 mouse_genomes_project 12 62881428 62886755 - MGP_NODShiLtJ_P0034643 Clec14a protein_coding protein_coding MGP_NODShiLtJ_T0101583.1 MGP_NODShiLtJ_G0039752.1 mouse_genomes_project 12 116159409 116164487 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098763.1 MGP_NODShiLtJ_G0037157.1 mouse_genomes_project 12 65846368 65846475 + Gm23059 snRNA snRNA MGP_NODShiLtJ_T0000067.1 MGP_NODShiLtJ_G0000053.1 mouse_genomes_project 12 127756991 127757449 - MGP_NODShiLtJ_P0000067 Ighv5-16 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000068.1 MGP_NODShiLtJ_G0000053.1 mouse_genomes_project 12 127756991 127757476 - MGP_NODShiLtJ_P0000068 Ighv5-16 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035110.1 MGP_NODShiLtJ_G0019779.1 mouse_genomes_project 12 93465915 93474399 + MGP_NODShiLtJ_P0035110 Acot3 protein_coding protein_coding MGP_NODShiLtJ_T0035111.1 MGP_NODShiLtJ_G0019779.1 mouse_genomes_project 12 93465922 93474399 + MGP_NODShiLtJ_P0035111 Acot3 protein_coding protein_coding MGP_NODShiLtJ_T0099974.1 MGP_NODShiLtJ_G0038368.1 mouse_genomes_project 12 11262220 11262355 - Gm24208 snoRNA snoRNA MGP_NODShiLtJ_T0000260.1 MGP_NODShiLtJ_G0000198.1 mouse_genomes_project 12 128891205 128891639 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035608.1 MGP_NODShiLtJ_G0019941.1 mouse_genomes_project 12 118589539 118591780 + MGP_NODShiLtJ_P0035608 Bdkrb1 protein_coding protein_coding MGP_NODShiLtJ_T0035609.1 MGP_NODShiLtJ_G0019941.1 mouse_genomes_project 12 118589573 118591423 + MGP_NODShiLtJ_P0035609 Bdkrb1 protein_coding protein_coding MGP_NODShiLtJ_T0035610.1 MGP_NODShiLtJ_G0019941.1 mouse_genomes_project 12 118590531 118591869 + MGP_NODShiLtJ_P0035610 Bdkrb1 protein_coding protein_coding MGP_NODShiLtJ_T0006398.1 MGP_NODShiLtJ_G0005327.1 mouse_genomes_project 12 120076570 120080039 - Gm16087 lincRNA lincRNA MGP_NODShiLtJ_T0034600.1 MGP_NODShiLtJ_G0019601.1 mouse_genomes_project 12 59386094 59405383 + MGP_NODShiLtJ_P0034600 protein_coding protein_coding MGP_NODShiLtJ_T0034829.1 MGP_NODShiLtJ_G0019684.1 mouse_genomes_project 12 80872198 80921549 + MGP_NODShiLtJ_P0034829 Ppm1a protein_coding protein_coding MGP_NODShiLtJ_T0035910.1 MGP_NODShiLtJ_G0020036.1 mouse_genomes_project 12 133837797 133845131 + MGP_NODShiLtJ_P0035910 Sp8 protein_coding protein_coding MGP_NODShiLtJ_T0098755.1 MGP_NODShiLtJ_G0037149.1 mouse_genomes_project 12 58278081 58278227 - Gm24692 snRNA snRNA MGP_NODShiLtJ_T0034153.1 MGP_NODShiLtJ_G0019429.1 mouse_genomes_project 12 1779624 1788554 + MGP_NODShiLtJ_P0034153 Pfn4 protein_coding protein_coding MGP_NODShiLtJ_T0034154.1 MGP_NODShiLtJ_G0019429.1 mouse_genomes_project 12 1779780 1788526 + MGP_NODShiLtJ_P0034154 Pfn4 protein_coding protein_coding MGP_NODShiLtJ_T0034791.1 MGP_NODShiLtJ_G0019670.1 mouse_genomes_project 12 79098045 79110420 + MGP_NODShiLtJ_P0034791 Tomm20l protein_coding protein_coding MGP_NODShiLtJ_T0098183.1 MGP_NODShiLtJ_G0036595.1 mouse_genomes_project 12 117858735 117859010 - Scarna13 scaRNA scaRNA MGP_NODShiLtJ_T0017177.1 MGP_NODShiLtJ_G0015101.1 mouse_genomes_project 12 79303343 79307383 - 4930474H06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0003338.1 MGP_NODShiLtJ_G0003064.1 mouse_genomes_project 12 41283499 41285949 + Gm17056 antisense antisense MGP_NODShiLtJ_T0009782.1 MGP_NODShiLtJ_G0007915.1 mouse_genomes_project 12 123075282 123075361 + Mir300 miRNA miRNA MGP_NODShiLtJ_T0012705.1 MGP_NODShiLtJ_G0010813.1 mouse_genomes_project 12 88023337 88023765 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035615.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799199 118854433 + MGP_NODShiLtJ_P0035615 Papola protein_coding protein_coding MGP_NODShiLtJ_T0035616.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799209 118854565 + MGP_NODShiLtJ_P0035616 Papola protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035617.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799216 118825217 + Papola protein_coding processed_transcript MGP_NODShiLtJ_T0035618.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799221 118852757 + MGP_NODShiLtJ_P0035618 Papola protein_coding protein_coding MGP_NODShiLtJ_T0035619.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799238 118829739 + Papola protein_coding retained_intron MGP_NODShiLtJ_T0035620.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799243 118852484 + MGP_NODShiLtJ_P0035620 Papola protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035621.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799245 118825379 + Papola protein_coding processed_transcript MGP_NODShiLtJ_T0035622.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799248 118854570 + MGP_NODShiLtJ_P0035622 Papola protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035623.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799250 118822259 + MGP_NODShiLtJ_P0035623 Papola protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035624.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799262 118825379 + MGP_NODShiLtJ_P0035624 Papola protein_coding protein_coding MGP_NODShiLtJ_T0035625.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799377 118852899 + MGP_NODShiLtJ_P0035625 Papola protein_coding protein_coding MGP_NODShiLtJ_T0035626.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118799412 118854575 + MGP_NODShiLtJ_P0035626 Papola protein_coding protein_coding MGP_NODShiLtJ_T0035627.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118815360 118827082 + Papola protein_coding retained_intron MGP_NODShiLtJ_T0035628.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118824283 118836049 + MGP_NODShiLtJ_P0035628 Papola protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035629.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118824993 118825379 + Papola protein_coding retained_intron MGP_NODShiLtJ_T0035630.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118827969 118852736 + MGP_NODShiLtJ_P0035630 Papola protein_coding protein_coding MGP_NODShiLtJ_T0035631.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118828020 118844844 + MGP_NODShiLtJ_P0035631 Papola protein_coding protein_coding MGP_NODShiLtJ_T0035632.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118833549 118834500 + Papola protein_coding retained_intron MGP_NODShiLtJ_T0035633.1 MGP_NODShiLtJ_G0019945.1 mouse_genomes_project 12 118844664 118851125 + MGP_NODShiLtJ_P0035633 Papola protein_coding protein_coding MGP_NODShiLtJ_T0034576.1 MGP_NODShiLtJ_G0019589.1 mouse_genomes_project 12 58212525 58239767 - MGP_NODShiLtJ_P0034576 Egln3 protein_coding protein_coding MGP_NODShiLtJ_T0034577.1 MGP_NODShiLtJ_G0019590.1 mouse_genomes_project 12 58714009 58726285 - MGP_NODShiLtJ_P0034577 Sptssa protein_coding protein_coding MGP_NODShiLtJ_T0034805.1 MGP_NODShiLtJ_G0019677.1 mouse_genomes_project 12 80112172 80123377 + MGP_NODShiLtJ_P0034805 Jkamp protein_coding protein_coding MGP_NODShiLtJ_T0034806.1 MGP_NODShiLtJ_G0019677.1 mouse_genomes_project 12 80112372 80122525 + Jkamp protein_coding processed_transcript MGP_NODShiLtJ_T0034807.1 MGP_NODShiLtJ_G0019677.1 mouse_genomes_project 12 80112440 80130358 + MGP_NODShiLtJ_P0034807 Jkamp protein_coding protein_coding MGP_NODShiLtJ_T0034808.1 MGP_NODShiLtJ_G0019677.1 mouse_genomes_project 12 80114405 80130958 + MGP_NODShiLtJ_P0034808 Jkamp protein_coding protein_coding MGP_NODShiLtJ_T0034809.1 MGP_NODShiLtJ_G0019677.1 mouse_genomes_project 12 80117671 80123377 + Jkamp protein_coding retained_intron MGP_NODShiLtJ_T0034810.1 MGP_NODShiLtJ_G0019677.1 mouse_genomes_project 12 80118212 80123251 + Jkamp protein_coding retained_intron MGP_NODShiLtJ_T0034811.1 MGP_NODShiLtJ_G0019677.1 mouse_genomes_project 12 80129297 80130349 + Jkamp protein_coding retained_intron MGP_NODShiLtJ_T0035010.1 MGP_NODShiLtJ_G0019756.1 mouse_genomes_project 12 90524961 90527465 - MGP_NODShiLtJ_P0035010 Adam4 protein_coding protein_coding MGP_NODShiLtJ_T0009776.1 MGP_NODShiLtJ_G0007909.1 mouse_genomes_project 12 123071006 123071098 + Mir667 miRNA miRNA MGP_NODShiLtJ_T0035195.1 MGP_NODShiLtJ_G0019804.1 mouse_genomes_project 12 94492327 94570109 + MGP_NODShiLtJ_P0035195 Ylpm1 protein_coding protein_coding MGP_NODShiLtJ_T0035196.1 MGP_NODShiLtJ_G0019804.1 mouse_genomes_project 12 94492358 94570132 + MGP_NODShiLtJ_P0035196 Ylpm1 protein_coding protein_coding MGP_NODShiLtJ_T0035197.1 MGP_NODShiLtJ_G0019804.1 mouse_genomes_project 12 94492461 94570131 + MGP_NODShiLtJ_P0035197 Ylpm1 protein_coding protein_coding MGP_NODShiLtJ_T0035198.1 MGP_NODShiLtJ_G0019804.1 mouse_genomes_project 12 94512356 94570109 + MGP_NODShiLtJ_P0035198 Ylpm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035199.1 MGP_NODShiLtJ_G0019804.1 mouse_genomes_project 12 94539917 94557027 + Ylpm1 protein_coding retained_intron MGP_NODShiLtJ_T0035200.1 MGP_NODShiLtJ_G0019804.1 mouse_genomes_project 12 94547380 94548312 + Ylpm1 protein_coding retained_intron MGP_NODShiLtJ_T0035201.1 MGP_NODShiLtJ_G0019804.1 mouse_genomes_project 12 94557650 94569866 + Ylpm1 protein_coding retained_intron MGP_NODShiLtJ_T0035202.1 MGP_NODShiLtJ_G0019804.1 mouse_genomes_project 12 94562369 94570032 + Ylpm1 protein_coding retained_intron MGP_NODShiLtJ_T0035061.1 MGP_NODShiLtJ_G0019766.1 mouse_genomes_project 12 92535067 92682881 - MGP_NODShiLtJ_P0035061 Dpf3 protein_coding protein_coding MGP_NODShiLtJ_T0035062.1 MGP_NODShiLtJ_G0019766.1 mouse_genomes_project 12 92535073 92832372 - MGP_NODShiLtJ_P0035062 Dpf3 protein_coding protein_coding MGP_NODShiLtJ_T0035063.1 MGP_NODShiLtJ_G0019766.1 mouse_genomes_project 12 92583274 92619325 - MGP_NODShiLtJ_P0035063 Dpf3 protein_coding protein_coding MGP_NODShiLtJ_T0035064.1 MGP_NODShiLtJ_G0019766.1 mouse_genomes_project 12 92591979 92832364 - MGP_NODShiLtJ_P0035064 Dpf3 protein_coding protein_coding MGP_NODShiLtJ_T0035065.1 MGP_NODShiLtJ_G0019766.1 mouse_genomes_project 12 92592096 92780614 - MGP_NODShiLtJ_P0035065 Dpf3 protein_coding protein_coding MGP_NODShiLtJ_T0035066.1 MGP_NODShiLtJ_G0019766.1 mouse_genomes_project 12 92592206 92832364 - MGP_NODShiLtJ_P0035066 Dpf3 protein_coding protein_coding MGP_NODShiLtJ_T0012700.1 MGP_NODShiLtJ_G0010808.1 mouse_genomes_project 12 79866474 79869364 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006356.1 MGP_NODShiLtJ_G0005293.1 mouse_genomes_project 12 79370102 79371157 - 1700083H02Rik lincRNA lincRNA MGP_NODShiLtJ_T0009806.1 MGP_NODShiLtJ_G0007939.1 mouse_genomes_project 12 125713534 125713619 + Mir3073a miRNA miRNA MGP_NODShiLtJ_T0099984.1 MGP_NODShiLtJ_G0038378.1 mouse_genomes_project 12 34787981 34788113 + Gm24429 snoRNA snoRNA MGP_NODShiLtJ_T0034965.1 MGP_NODShiLtJ_G0019737.1 mouse_genomes_project 12 88114083 88202455 - MGP_NODShiLtJ_P0034965 Zfyve26 protein_coding protein_coding MGP_NODShiLtJ_T0034310.1 MGP_NODShiLtJ_G0019489.1 mouse_genomes_project 12 23615353 23626834 + MGP_NODShiLtJ_P0034310 Klf11 protein_coding protein_coding MGP_NODShiLtJ_T0034311.1 MGP_NODShiLtJ_G0019489.1 mouse_genomes_project 12 23615878 23619105 + MGP_NODShiLtJ_P0034311 Klf11 protein_coding protein_coding MGP_NODShiLtJ_T0034312.1 MGP_NODShiLtJ_G0019489.1 mouse_genomes_project 12 23615878 23617776 + MGP_NODShiLtJ_P0034312 Klf11 protein_coding protein_coding MGP_NODShiLtJ_T0034313.1 MGP_NODShiLtJ_G0019489.1 mouse_genomes_project 12 23616135 23619100 + MGP_NODShiLtJ_P0034313 Klf11 protein_coding protein_coding MGP_NODShiLtJ_T0034272.1 MGP_NODShiLtJ_G0019476.1 mouse_genomes_project 12 15890436 15932608 - MGP_NODShiLtJ_P0034272 Atp6v1c2 protein_coding protein_coding MGP_NODShiLtJ_T0034273.1 MGP_NODShiLtJ_G0019476.1 mouse_genomes_project 12 15890437 15932599 - MGP_NODShiLtJ_P0034273 Atp6v1c2 protein_coding protein_coding MGP_NODShiLtJ_T0034274.1 MGP_NODShiLtJ_G0019476.1 mouse_genomes_project 12 15890437 15932561 - MGP_NODShiLtJ_P0034274 Atp6v1c2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034275.1 MGP_NODShiLtJ_G0019476.1 mouse_genomes_project 12 15890438 15915628 - MGP_NODShiLtJ_P0034275 Atp6v1c2 protein_coding protein_coding MGP_NODShiLtJ_T0034276.1 MGP_NODShiLtJ_G0019476.1 mouse_genomes_project 12 15890574 15932564 - MGP_NODShiLtJ_P0034276 Atp6v1c2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034277.1 MGP_NODShiLtJ_G0019476.1 mouse_genomes_project 12 15905043 15937204 - MGP_NODShiLtJ_P0034277 Atp6v1c2 protein_coding protein_coding MGP_NODShiLtJ_T0034278.1 MGP_NODShiLtJ_G0019476.1 mouse_genomes_project 12 15915515 15932626 - MGP_NODShiLtJ_P0034278 Atp6v1c2 protein_coding protein_coding MGP_NODShiLtJ_T0034279.1 MGP_NODShiLtJ_G0019476.1 mouse_genomes_project 12 15915559 15937215 - MGP_NODShiLtJ_P0034279 Atp6v1c2 protein_coding protein_coding MGP_NODShiLtJ_T0097751.1 MGP_NODShiLtJ_G0036163.1 mouse_genomes_project 12 34910791 34912409 + pseudogene pseudogene MGP_NODShiLtJ_T0035667.1 MGP_NODShiLtJ_G0019958.1 mouse_genomes_project 12 122105920 122115924 - MGP_NODShiLtJ_P0035667 Slc25a29 protein_coding protein_coding MGP_NODShiLtJ_T0035668.1 MGP_NODShiLtJ_G0019958.1 mouse_genomes_project 12 122107285 122111675 - Slc25a29 protein_coding retained_intron MGP_NODShiLtJ_T0035669.1 MGP_NODShiLtJ_G0019958.1 mouse_genomes_project 12 122111000 122115861 - Slc25a29 protein_coding retained_intron MGP_NODShiLtJ_T0099977.1 MGP_NODShiLtJ_G0038371.1 mouse_genomes_project 12 20097580 20097714 + Gm25821 snoRNA snoRNA MGP_NODShiLtJ_T0034256.1 MGP_NODShiLtJ_G0019472.1 mouse_genomes_project 12 15568498 15581751 - Pqlc3 protein_coding retained_intron MGP_NODShiLtJ_T0034257.1 MGP_NODShiLtJ_G0019472.1 mouse_genomes_project 12 15568498 15581837 - MGP_NODShiLtJ_P0034257 Pqlc3 protein_coding protein_coding MGP_NODShiLtJ_T0034258.1 MGP_NODShiLtJ_G0019472.1 mouse_genomes_project 12 15574677 15581744 - MGP_NODShiLtJ_P0034258 Pqlc3 protein_coding protein_coding MGP_NODShiLtJ_T0034259.1 MGP_NODShiLtJ_G0019472.1 mouse_genomes_project 12 15575226 15581745 - Pqlc3 protein_coding processed_transcript MGP_NODShiLtJ_T0034260.1 MGP_NODShiLtJ_G0019472.1 mouse_genomes_project 12 15575371 15581835 - MGP_NODShiLtJ_P0034260 Pqlc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034261.1 MGP_NODShiLtJ_G0019472.1 mouse_genomes_project 12 15577358 15582127 - Pqlc3 protein_coding processed_transcript MGP_NODShiLtJ_T0034262.1 MGP_NODShiLtJ_G0019472.1 mouse_genomes_project 12 15577358 15582127 - Pqlc3 protein_coding processed_transcript MGP_NODShiLtJ_T0006392.1 MGP_NODShiLtJ_G0005324.1 mouse_genomes_project 12 119653589 119670853 + Gm17033 lincRNA lincRNA MGP_NODShiLtJ_T0034717.1 MGP_NODShiLtJ_G0019644.1 mouse_genomes_project 12 77025076 77035585 - MGP_NODShiLtJ_P0034717 Dnaaf2 protein_coding protein_coding MGP_NODShiLtJ_T0035392.1 MGP_NODShiLtJ_G0019861.1 mouse_genomes_project 12 110191873 110200915 + MGP_NODShiLtJ_P0035392 Gpr65 protein_coding protein_coding MGP_NODShiLtJ_T0035599.1 MGP_NODShiLtJ_G0019937.1 mouse_genomes_project 12 118136110 118139670 + MGP_NODShiLtJ_P0035599 Tcl1b4 protein_coding protein_coding MGP_NODShiLtJ_T0035222.1 MGP_NODShiLtJ_G0019812.1 mouse_genomes_project 12 94799094 94809862 + MGP_NODShiLtJ_P0035222 Zc2hc1c protein_coding protein_coding MGP_NODShiLtJ_T0035776.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125322549 125376128 + MGP_NODShiLtJ_P0035776 Klc1 protein_coding protein_coding MGP_NODShiLtJ_T0035777.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125322656 125364270 + MGP_NODShiLtJ_P0035777 Klc1 protein_coding protein_coding MGP_NODShiLtJ_T0035778.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125322713 125376080 + MGP_NODShiLtJ_P0035778 Klc1 protein_coding protein_coding MGP_NODShiLtJ_T0035779.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125340193 125364268 + MGP_NODShiLtJ_P0035779 Klc1 protein_coding protein_coding MGP_NODShiLtJ_T0035780.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125349814 125377197 + MGP_NODShiLtJ_P0035780 Klc1 protein_coding protein_coding MGP_NODShiLtJ_T0035781.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125353784 125356298 + Klc1 protein_coding retained_intron MGP_NODShiLtJ_T0035782.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125357837 125363771 + Klc1 protein_coding processed_transcript MGP_NODShiLtJ_T0035783.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125364724 125376079 + Klc1 protein_coding retained_intron MGP_NODShiLtJ_T0035789.1 MGP_NODShiLtJ_G0019991.1 mouse_genomes_project 12 125374856 125376064 + Klc1 protein_coding retained_intron MGP_NODShiLtJ_T0035794.1 MGP_NODShiLtJ_G0019994.1 mouse_genomes_project 12 125401162 125491594 - MGP_NODShiLtJ_P0035794 Ppp1r13b protein_coding protein_coding MGP_NODShiLtJ_T0035795.1 MGP_NODShiLtJ_G0019994.1 mouse_genomes_project 12 125445172 125491579 - MGP_NODShiLtJ_P0035795 Ppp1r13b protein_coding protein_coding MGP_NODShiLtJ_T0000024.1 MGP_NODShiLtJ_G0000018.1 mouse_genomes_project 12 127209437 127209449 - IG_D_gene processed_transcript MGP_NODShiLtJ_T0034155.1 MGP_NODShiLtJ_G0019430.1 mouse_genomes_project 12 1827773 1839692 + MGP_NODShiLtJ_P0034155 Sf3b6 protein_coding protein_coding MGP_NODShiLtJ_T0000240.1 MGP_NODShiLtJ_G0000178.1 mouse_genomes_project 12 127808734 127809154 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0012728.1 MGP_NODShiLtJ_G0010836.1 mouse_genomes_project 12 119541821 119542167 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034506.1 MGP_NODShiLtJ_G0019559.1 mouse_genomes_project 12 41254378 41284159 - MGP_NODShiLtJ_P0034506 Lsmem1 protein_coding protein_coding MGP_NODShiLtJ_T0034146.1 MGP_NODShiLtJ_G0019423.1 mouse_genomes_project 12 1199171 1466393 - MGP_NODShiLtJ_P0034146 Ncoa1 protein_coding protein_coding MGP_NODShiLtJ_T0012687.1 MGP_NODShiLtJ_G0010795.1 mouse_genomes_project 12 59090573 59091782 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009797.1 MGP_NODShiLtJ_G0007930.1 mouse_genomes_project 12 123094406 123094496 + Mir541 miRNA miRNA MGP_NODShiLtJ_T0006330.1 MGP_NODShiLtJ_G0005274.1 mouse_genomes_project 12 10976208 10981608 + 4930519A11Rik lincRNA lincRNA MGP_NODShiLtJ_T0034363.1 MGP_NODShiLtJ_G0019509.1 mouse_genomes_project 12 29393100 29462582 - MGP_NODShiLtJ_P0034363 Tpo protein_coding protein_coding MGP_NODShiLtJ_T0034364.1 MGP_NODShiLtJ_G0019509.1 mouse_genomes_project 12 29422617 29425475 - Tpo protein_coding retained_intron MGP_NODShiLtJ_T0034365.1 MGP_NODShiLtJ_G0019509.1 mouse_genomes_project 12 29446655 29461854 - MGP_NODShiLtJ_P0034365 Tpo protein_coding protein_coding MGP_NODShiLtJ_T0034520.1 MGP_NODShiLtJ_G0019562.1 mouse_genomes_project 12 41410925 41531307 - MGP_NODShiLtJ_P0034520 Zfp277 protein_coding protein_coding MGP_NODShiLtJ_T0034521.1 MGP_NODShiLtJ_G0019562.1 mouse_genomes_project 12 41411437 41531286 - MGP_NODShiLtJ_P0034521 Zfp277 protein_coding protein_coding MGP_NODShiLtJ_T0017190.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122948618 122952173 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017191.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122948623 122991556 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017192.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122948724 122973359 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017193.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122965021 122992500 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017194.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122965021 122980364 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017195.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122970137 122991622 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017196.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122978944 122982398 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017197.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122980090 122989638 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017198.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122980334 122992423 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017199.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122990115 122991603 + Rian processed_transcript TEC MGP_NODShiLtJ_T0017200.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122992300 123010555 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017201.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122992321 123002384 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017202.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122993430 123008030 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017203.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122995958 122997130 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017204.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122996847 123003244 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017205.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122997459 123009245 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017206.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122997463 123003265 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017207.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 122997793 123007976 + Rian processed_transcript lincRNA MGP_NODShiLtJ_T0017208.1 MGP_NODShiLtJ_G0015111.1 mouse_genomes_project 12 123004643 123007353 + Rian processed_transcript TEC MGP_NODShiLtJ_T0000057.1 MGP_NODShiLtJ_G0000045.1 mouse_genomes_project 12 127405132 127405592 - MGP_NODShiLtJ_P0000057 Ighv5-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034619.1 MGP_NODShiLtJ_G0019611.1 mouse_genomes_project 12 60964603 60966483 - MGP_NODShiLtJ_P0034619 Nkx2-9 protein_coding protein_coding MGP_NODShiLtJ_T0000275.1 MGP_NODShiLtJ_G0000213.1 mouse_genomes_project 12 130617676 130617955 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034314.1 MGP_NODShiLtJ_G0019490.1 mouse_genomes_project 12 23631024 23647036 - MGP_NODShiLtJ_P0034314 Cys1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034315.1 MGP_NODShiLtJ_G0019490.1 mouse_genomes_project 12 23631034 23647018 - MGP_NODShiLtJ_P0034315 Cys1 protein_coding protein_coding MGP_NODShiLtJ_T0034316.1 MGP_NODShiLtJ_G0019490.1 mouse_genomes_project 12 23631034 23647018 - MGP_NODShiLtJ_P0034316 Cys1 protein_coding protein_coding MGP_NODShiLtJ_T0034317.1 MGP_NODShiLtJ_G0019490.1 mouse_genomes_project 12 23631139 23646244 - MGP_NODShiLtJ_P0034317 Cys1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034318.1 MGP_NODShiLtJ_G0019490.1 mouse_genomes_project 12 23631139 23646244 - MGP_NODShiLtJ_P0034318 Cys1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034319.1 MGP_NODShiLtJ_G0019490.1 mouse_genomes_project 12 23631740 23645158 - Cys1 protein_coding processed_transcript MGP_NODShiLtJ_T0034320.1 MGP_NODShiLtJ_G0019490.1 mouse_genomes_project 12 23631876 23646161 - MGP_NODShiLtJ_P0034320 Cys1 protein_coding protein_coding MGP_NODShiLtJ_T0034321.1 MGP_NODShiLtJ_G0019490.1 mouse_genomes_project 12 23633679 23645940 - MGP_NODShiLtJ_P0034321 Cys1 protein_coding protein_coding MGP_NODShiLtJ_T0035174.1 MGP_NODShiLtJ_G0019798.1 mouse_genomes_project 12 94234638 94253197 - MGP_NODShiLtJ_P0035174 Npc2 protein_coding protein_coding MGP_NODShiLtJ_T0034943.1 MGP_NODShiLtJ_G0019725.1 mouse_genomes_project 12 87503860 87550032 + MGP_NODShiLtJ_P0034943 Fam71d protein_coding protein_coding MGP_NODShiLtJ_T0100003.1 MGP_NODShiLtJ_G0038397.1 mouse_genomes_project 12 72439764 72439896 + Gm22782 snoRNA snoRNA MGP_NODShiLtJ_T0035861.1 MGP_NODShiLtJ_G0020022.1 mouse_genomes_project 12 126836567 126841502 + MGP_NODShiLtJ_P0035861 Crip2 protein_coding protein_coding MGP_NODShiLtJ_T0035862.1 MGP_NODShiLtJ_G0020022.1 mouse_genomes_project 12 126836567 126841099 + MGP_NODShiLtJ_P0035862 Crip2 protein_coding protein_coding MGP_NODShiLtJ_T0035863.1 MGP_NODShiLtJ_G0020022.1 mouse_genomes_project 12 126839330 126840965 + Crip2 protein_coding retained_intron MGP_NODShiLtJ_T0035864.1 MGP_NODShiLtJ_G0020022.1 mouse_genomes_project 12 126839465 126840227 + Crip2 protein_coding retained_intron MGP_NODShiLtJ_T0035865.1 MGP_NODShiLtJ_G0020022.1 mouse_genomes_project 12 126840081 126840700 + Crip2 protein_coding retained_intron MGP_NODShiLtJ_T0034770.1 MGP_NODShiLtJ_G0019664.1 mouse_genomes_project 12 78186203 78290545 - MGP_NODShiLtJ_P0034770 Trim9 protein_coding protein_coding MGP_NODShiLtJ_T0034771.1 MGP_NODShiLtJ_G0019664.1 mouse_genomes_project 12 78186203 78290545 - MGP_NODShiLtJ_P0034771 Trim9 protein_coding protein_coding MGP_NODShiLtJ_T0034772.1 MGP_NODShiLtJ_G0019664.1 mouse_genomes_project 12 78188053 78196843 - MGP_NODShiLtJ_P0034772 Trim9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034773.1 MGP_NODShiLtJ_G0019664.1 mouse_genomes_project 12 78205413 78290545 - MGP_NODShiLtJ_P0034773 Trim9 protein_coding protein_coding MGP_NODShiLtJ_T0034607.1 MGP_NODShiLtJ_G0019603.1 mouse_genomes_project 12 59601734 59638379 + MGP_NODShiLtJ_P0034607 Psma6 protein_coding protein_coding MGP_NODShiLtJ_T0034608.1 MGP_NODShiLtJ_G0019603.1 mouse_genomes_project 12 59616932 59638523 + MGP_NODShiLtJ_P0034608 Psma6 protein_coding protein_coding MGP_NODShiLtJ_T0034609.1 MGP_NODShiLtJ_G0019603.1 mouse_genomes_project 12 59616952 59638510 + MGP_NODShiLtJ_P0034609 Psma6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034610.1 MGP_NODShiLtJ_G0019603.1 mouse_genomes_project 12 59626259 59632542 + Psma6 protein_coding processed_transcript MGP_NODShiLtJ_T0000147.1 MGP_NODShiLtJ_G0000107.1 mouse_genomes_project 12 130800669 130801103 - MGP_NODShiLtJ_P0000147 Ighv1-85 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034701.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 73576069 74601699 - MGP_NODShiLtJ_P0034701 Mdga2 protein_coding protein_coding MGP_NODShiLtJ_T0034702.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 73577137 73577560 - MGP_NODShiLtJ_P0034702 Mdga2 protein_coding protein_coding MGP_NODShiLtJ_T0034703.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 73577683 74600393 - MGP_NODShiLtJ_P0034703 Mdga2 protein_coding protein_coding MGP_NODShiLtJ_T0034704.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 73577970 74600374 - MGP_NODShiLtJ_P0034704 Mdga2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034705.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 73587973 73594446 - Mdga2 protein_coding retained_intron MGP_NODShiLtJ_T0034706.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 73805674 73816189 - Mdga2 protein_coding processed_transcript MGP_NODShiLtJ_T0034707.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 73900159 74093993 - Mdga2 protein_coding processed_transcript MGP_NODShiLtJ_T0034708.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 74568407 74601692 - Mdga2 protein_coding processed_transcript MGP_NODShiLtJ_T0034709.1 MGP_NODShiLtJ_G0019639.1 mouse_genomes_project 12 74587934 74601531 - Mdga2 protein_coding processed_transcript MGP_NODShiLtJ_T0003339.1 MGP_NODShiLtJ_G0003065.1 mouse_genomes_project 12 41297510 41299097 - Gm17024 antisense antisense MGP_NODShiLtJ_T0034730.1 MGP_NODShiLtJ_G0019651.1 mouse_genomes_project 12 77235100 77238931 + MGP_NODShiLtJ_P0034730 Arf6 protein_coding protein_coding MGP_NODShiLtJ_T0012716.1 MGP_NODShiLtJ_G0010824.1 mouse_genomes_project 12 98116629 98117469 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034877.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84281230 84347748 + MGP_NODShiLtJ_P0034877 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034878.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84281413 84595280 + MGP_NODShiLtJ_P0034878 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034879.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84281413 84595255 + MGP_NODShiLtJ_P0034879 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034880.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84281418 84359114 + Syne2 protein_coding retained_intron MGP_NODShiLtJ_T0034881.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84281424 84378908 + MGP_NODShiLtJ_P0034881 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034882.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84281445 84375935 + Syne2 protein_coding retained_intron MGP_NODShiLtJ_T0034883.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84315767 84347570 + MGP_NODShiLtJ_P0034883 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034884.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84379245 84384976 + Syne2 protein_coding retained_intron MGP_NODShiLtJ_T0034885.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84502514 84508037 + MGP_NODShiLtJ_P0034885 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034886.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84511859 84595274 + MGP_NODShiLtJ_P0034886 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034887.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84529753 84595255 + MGP_NODShiLtJ_P0034887 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034888.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84540949 84548525 + Syne2 protein_coding retained_intron MGP_NODShiLtJ_T0034889.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84554613 84578527 + MGP_NODShiLtJ_P0034889 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034890.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84565577 84579137 + MGP_NODShiLtJ_P0034890 Syne2 protein_coding protein_coding MGP_NODShiLtJ_T0034891.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84565860 84582071 + MGP_NODShiLtJ_P0034891 Syne2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034892.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84571716 84595280 + MGP_NODShiLtJ_P0034892 Syne2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034893.1 MGP_NODShiLtJ_G0019706.1 mouse_genomes_project 12 84584989 84590347 + Syne2 protein_coding retained_intron MGP_NODShiLtJ_T0035463.1 MGP_NODShiLtJ_G0019882.1 mouse_genomes_project 12 114111129 114193064 - MGP_NODShiLtJ_P0035463 Trip11 protein_coding protein_coding MGP_NODShiLtJ_T0035464.1 MGP_NODShiLtJ_G0019882.1 mouse_genomes_project 12 114114634 114172110 - MGP_NODShiLtJ_P0035464 Trip11 protein_coding protein_coding MGP_NODShiLtJ_T0035465.1 MGP_NODShiLtJ_G0019882.1 mouse_genomes_project 12 114149928 114161105 - MGP_NODShiLtJ_P0035465 Trip11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035466.1 MGP_NODShiLtJ_G0019882.1 mouse_genomes_project 12 114163717 114192920 - MGP_NODShiLtJ_P0035466 Trip11 protein_coding protein_coding MGP_NODShiLtJ_T0035467.1 MGP_NODShiLtJ_G0019882.1 mouse_genomes_project 12 114167049 114192937 - MGP_NODShiLtJ_P0035467 Trip11 protein_coding protein_coding MGP_NODShiLtJ_T0035468.1 MGP_NODShiLtJ_G0019882.1 mouse_genomes_project 12 114192072 114192952 - Trip11 protein_coding processed_transcript MGP_NODShiLtJ_T0035034.1 MGP_NODShiLtJ_G0019762.1 mouse_genomes_project 12 91013500 91175233 + MGP_NODShiLtJ_P0035034 Pcnx protein_coding protein_coding MGP_NODShiLtJ_T0035035.1 MGP_NODShiLtJ_G0019762.1 mouse_genomes_project 12 91013842 91175235 + MGP_NODShiLtJ_P0035035 Pcnx protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035442.1 MGP_NODShiLtJ_G0019876.1 mouse_genomes_project 12 112649601 112852963 - MGP_NODShiLtJ_P0035442 Rps6ka5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035443.1 MGP_NODShiLtJ_G0019876.1 mouse_genomes_project 12 112650944 112853111 - MGP_NODShiLtJ_P0035443 Rps6ka5 protein_coding protein_coding MGP_NODShiLtJ_T0034649.1 MGP_NODShiLtJ_G0019621.1 mouse_genomes_project 12 63729472 63746315 + MGP_NODShiLtJ_P0034649 Gemin2 protein_coding protein_coding MGP_NODShiLtJ_T0034650.1 MGP_NODShiLtJ_G0019621.1 mouse_genomes_project 12 63729533 63746244 + Gemin2 protein_coding retained_intron MGP_NODShiLtJ_T0034651.1 MGP_NODShiLtJ_G0019621.1 mouse_genomes_project 12 63742512 63745732 + Gemin2 protein_coding retained_intron MGP_NODShiLtJ_T0035600.1 MGP_NODShiLtJ_G0019938.1 mouse_genomes_project 12 118149931 118155919 - MGP_NODShiLtJ_P0035600 Tcl1 protein_coding protein_coding MGP_NODShiLtJ_T0035601.1 MGP_NODShiLtJ_G0019938.1 mouse_genomes_project 12 118149939 118155898 - MGP_NODShiLtJ_P0035601 Tcl1 protein_coding protein_coding MGP_NODShiLtJ_T0035602.1 MGP_NODShiLtJ_G0019938.1 mouse_genomes_project 12 118150489 118155888 - MGP_NODShiLtJ_P0035602 Tcl1 protein_coding protein_coding MGP_NODShiLtJ_T0035603.1 MGP_NODShiLtJ_G0019938.1 mouse_genomes_project 12 118150679 118155975 - MGP_NODShiLtJ_P0035603 Tcl1 protein_coding protein_coding MGP_NODShiLtJ_T0035604.1 MGP_NODShiLtJ_G0019938.1 mouse_genomes_project 12 118150775 118155878 - MGP_NODShiLtJ_P0035604 Tcl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035605.1 MGP_NODShiLtJ_G0019938.1 mouse_genomes_project 12 118151471 118155807 - Tcl1 protein_coding processed_transcript MGP_NODShiLtJ_T0097925.1 MGP_NODShiLtJ_G0036337.1 mouse_genomes_project 12 135086042 135086160 - Gm25675 rRNA rRNA MGP_NODShiLtJ_T0035137.1 MGP_NODShiLtJ_G0019787.1 mouse_genomes_project 12 93785205 93803068 - MGP_NODShiLtJ_P0035137 Fam161b protein_coding protein_coding MGP_NODShiLtJ_T0035138.1 MGP_NODShiLtJ_G0019787.1 mouse_genomes_project 12 93785213 93803056 - MGP_NODShiLtJ_P0035138 Fam161b protein_coding protein_coding MGP_NODShiLtJ_T0035139.1 MGP_NODShiLtJ_G0019787.1 mouse_genomes_project 12 93786388 93803027 - Fam161b protein_coding retained_intron MGP_NODShiLtJ_T0035140.1 MGP_NODShiLtJ_G0019787.1 mouse_genomes_project 12 93788255 93794752 - Fam161b protein_coding retained_intron MGP_NODShiLtJ_T0035570.1 MGP_NODShiLtJ_G0019918.1 mouse_genomes_project 12 116698998 116712509 + MGP_NODShiLtJ_P0035570 Serpina3a protein_coding protein_coding MGP_NODShiLtJ_T0035571.1 MGP_NODShiLtJ_G0019918.1 mouse_genomes_project 12 116699053 116712422 + MGP_NODShiLtJ_P0035571 Serpina3a protein_coding protein_coding MGP_NODShiLtJ_T0035572.1 MGP_NODShiLtJ_G0019918.1 mouse_genomes_project 12 116706706 116712132 + MGP_NODShiLtJ_P0035572 Serpina3a protein_coding protein_coding MGP_NODShiLtJ_T0009740.1 MGP_NODShiLtJ_G0007873.1 mouse_genomes_project 12 122909920 122910011 + Mir673 miRNA miRNA MGP_NODShiLtJ_T0034220.1 MGP_NODShiLtJ_G0019453.1 mouse_genomes_project 12 9128426 9128993 - MGP_NODShiLtJ_P0034220 Msgn1 protein_coding protein_coding MGP_NODShiLtJ_T0035218.1 MGP_NODShiLtJ_G0019811.1 mouse_genomes_project 12 94783930 94791953 - MGP_NODShiLtJ_P0035218 Acyp1 protein_coding protein_coding MGP_NODShiLtJ_T0035219.1 MGP_NODShiLtJ_G0019811.1 mouse_genomes_project 12 94783941 94791824 - MGP_NODShiLtJ_P0035219 Acyp1 protein_coding protein_coding MGP_NODShiLtJ_T0035220.1 MGP_NODShiLtJ_G0019811.1 mouse_genomes_project 12 94784079 94797934 - MGP_NODShiLtJ_P0035220 Acyp1 protein_coding protein_coding MGP_NODShiLtJ_T0035221.1 MGP_NODShiLtJ_G0019811.1 mouse_genomes_project 12 94790410 94791936 - MGP_NODShiLtJ_P0035221 Acyp1 protein_coding protein_coding MGP_NODShiLtJ_T0009792.1 MGP_NODShiLtJ_G0007925.1 mouse_genomes_project 12 123085908 123085981 + Mir485 miRNA miRNA MGP_NODShiLtJ_T0035092.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93180919 93320297 - MGP_NODShiLtJ_P0035092 Numb protein_coding protein_coding MGP_NODShiLtJ_T0035093.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93180921 93268828 - MGP_NODShiLtJ_P0035093 Numb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035094.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93180956 93320207 - MGP_NODShiLtJ_P0035094 Numb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035095.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93182324 93233547 - MGP_NODShiLtJ_P0035095 Numb protein_coding protein_coding MGP_NODShiLtJ_T0035096.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93182324 93233547 - MGP_NODShiLtJ_P0035096 Numb protein_coding protein_coding MGP_NODShiLtJ_T0035097.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93182324 93233547 - MGP_NODShiLtJ_P0035097 Numb protein_coding protein_coding MGP_NODShiLtJ_T0035098.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93190823 93320230 - MGP_NODShiLtJ_P0035098 Numb protein_coding protein_coding MGP_NODShiLtJ_T0035099.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93194968 93320219 - MGP_NODShiLtJ_P0035099 Numb protein_coding protein_coding MGP_NODShiLtJ_T0035100.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93195039 93320246 - MGP_NODShiLtJ_P0035100 Numb protein_coding protein_coding MGP_NODShiLtJ_T0035101.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93197650 93320253 - MGP_NODShiLtJ_P0035101 Numb protein_coding protein_coding MGP_NODShiLtJ_T0035102.1 MGP_NODShiLtJ_G0019772.1 mouse_genomes_project 12 93221776 93268816 - Numb protein_coding retained_intron MGP_NODShiLtJ_T0009729.1 MGP_NODShiLtJ_G0007862.1 mouse_genomes_project 12 115038104 115038197 - Mir1936 miRNA miRNA MGP_NODShiLtJ_T0035746.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124952923 124966692 + MGP_NODShiLtJ_P0035746 Tnfaip2 protein_coding protein_coding MGP_NODShiLtJ_T0035747.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124953112 124966352 + MGP_NODShiLtJ_P0035747 Tnfaip2 protein_coding protein_coding MGP_NODShiLtJ_T0035748.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124953116 124966352 + Tnfaip2 protein_coding retained_intron MGP_NODShiLtJ_T0035749.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124953116 124959041 + MGP_NODShiLtJ_P0035749 Tnfaip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035750.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124954778 124955966 + MGP_NODShiLtJ_P0035750 Tnfaip2 protein_coding protein_coding MGP_NODShiLtJ_T0035751.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124955452 124965499 + MGP_NODShiLtJ_P0035751 Tnfaip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035752.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124956538 124965499 + MGP_NODShiLtJ_P0035752 Tnfaip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035753.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124958588 124959765 + Tnfaip2 protein_coding retained_intron MGP_NODShiLtJ_T0035754.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124961203 124963155 + Tnfaip2 protein_coding retained_intron MGP_NODShiLtJ_T0035755.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124961558 124965433 + MGP_NODShiLtJ_P0035755 Tnfaip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035756.1 MGP_NODShiLtJ_G0019983.1 mouse_genomes_project 12 124962204 124965300 + Tnfaip2 protein_coding retained_intron MGP_NODShiLtJ_T0006361.1 MGP_NODShiLtJ_G0005296.1 mouse_genomes_project 12 86863372 86875161 + lincRNA lincRNA MGP_NODShiLtJ_T0006362.1 MGP_NODShiLtJ_G0005296.1 mouse_genomes_project 12 86864861 86867267 + lincRNA lincRNA MGP_NODShiLtJ_T0006363.1 MGP_NODShiLtJ_G0005296.1 mouse_genomes_project 12 86867187 86875260 + lincRNA lincRNA MGP_NODShiLtJ_T0034240.1 MGP_NODShiLtJ_G0019468.1 mouse_genomes_project 12 15210441 15217160 + MGP_NODShiLtJ_P0034240 Ntsr2 protein_coding protein_coding MGP_NODShiLtJ_T0009751.1 MGP_NODShiLtJ_G0007884.1 mouse_genomes_project 12 122938335 122938477 + Mir434 miRNA miRNA MGP_NODShiLtJ_T0100006.1 MGP_NODShiLtJ_G0038400.1 mouse_genomes_project 12 86445994 86446124 - Gm24070 snoRNA snoRNA MGP_NODShiLtJ_T0009725.1 MGP_NODShiLtJ_G0007858.1 mouse_genomes_project 12 99194547 99194689 - Gm27313 miRNA miRNA MGP_NODShiLtJ_T0011216.1 MGP_NODShiLtJ_G0009349.1 mouse_genomes_project 12 67434031 67434344 + Gm23213 misc_RNA misc_RNA MGP_NODShiLtJ_T0017175.1 MGP_NODShiLtJ_G0015099.1 mouse_genomes_project 12 33014723 33054261 - Atxn7l1os2 processed_transcript processed_transcript MGP_NODShiLtJ_T0034655.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63816427 63919723 + MGP_NODShiLtJ_P0034655 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034656.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63856997 63919718 + MGP_NODShiLtJ_P0034656 protein_coding protein_coding MGP_NODShiLtJ_T0034657.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63857023 63919715 + MGP_NODShiLtJ_P0034657 protein_coding protein_coding MGP_NODShiLtJ_T0034658.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63857040 63919718 + MGP_NODShiLtJ_P0034658 protein_coding protein_coding MGP_NODShiLtJ_T0034659.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63857042 63878365 + MGP_NODShiLtJ_P0034659 protein_coding protein_coding MGP_NODShiLtJ_T0034660.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63857062 63919764 + MGP_NODShiLtJ_P0034660 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034661.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63857087 63897665 + MGP_NODShiLtJ_P0034661 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034662.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63857653 63919492 + MGP_NODShiLtJ_P0034662 protein_coding protein_coding MGP_NODShiLtJ_T0034663.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63858113 63919764 + MGP_NODShiLtJ_P0034663 protein_coding protein_coding MGP_NODShiLtJ_T0034664.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63858298 63875699 + MGP_NODShiLtJ_P0034664 protein_coding protein_coding MGP_NODShiLtJ_T0034665.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63858562 63922273 + MGP_NODShiLtJ_P0034665 protein_coding protein_coding MGP_NODShiLtJ_T0034666.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63858729 63919715 + MGP_NODShiLtJ_P0034666 protein_coding protein_coding MGP_NODShiLtJ_T0034667.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63858743 63919494 + MGP_NODShiLtJ_P0034667 protein_coding protein_coding MGP_NODShiLtJ_T0034668.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63858757 63873802 + protein_coding retained_intron MGP_NODShiLtJ_T0034669.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63858778 63919764 + MGP_NODShiLtJ_P0034669 protein_coding protein_coding MGP_NODShiLtJ_T0034670.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63863382 63919494 + MGP_NODShiLtJ_P0034670 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034671.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63878337 63919494 + MGP_NODShiLtJ_P0034671 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034672.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63895509 63905203 + protein_coding retained_intron MGP_NODShiLtJ_T0034673.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63897707 63899773 + protein_coding retained_intron MGP_NODShiLtJ_T0034674.1 MGP_NODShiLtJ_G0019625.1 mouse_genomes_project 12 63909057 63918061 + protein_coding retained_intron MGP_NODShiLtJ_T0099985.1 MGP_NODShiLtJ_G0038379.1 mouse_genomes_project 12 36425858 36425968 - Gm25438 snoRNA snoRNA MGP_NODShiLtJ_T0034283.1 MGP_NODShiLtJ_G0019479.1 mouse_genomes_project 12 16391953 16495990 + MGP_NODShiLtJ_P0034283 Hpcal1 protein_coding protein_coding MGP_NODShiLtJ_T0035173.1 MGP_NODShiLtJ_G0019797.1 mouse_genomes_project 12 94157932 94179820 - MGP_NODShiLtJ_P0035173 Syndig1l protein_coding protein_coding MGP_NODShiLtJ_T0035474.1 MGP_NODShiLtJ_G0019884.1 mouse_genomes_project 12 114263838 114296094 + MGP_NODShiLtJ_P0035474 Cpsf2 protein_coding protein_coding MGP_NODShiLtJ_T0034719.1 MGP_NODShiLtJ_G0019646.1 mouse_genomes_project 12 77038930 77066822 - MGP_NODShiLtJ_P0034719 Pole2 protein_coding protein_coding MGP_NODShiLtJ_T0035584.1 MGP_NODShiLtJ_G0019924.1 mouse_genomes_project 12 117066570 117075416 + MGP_NODShiLtJ_P0035584 Serpina3k protein_coding protein_coding MGP_NODShiLtJ_T0035203.1 MGP_NODShiLtJ_G0019805.1 mouse_genomes_project 12 94586993 94597640 - MGP_NODShiLtJ_P0035203 Prox2 protein_coding protein_coding MGP_NODShiLtJ_T0035204.1 MGP_NODShiLtJ_G0019805.1 mouse_genomes_project 12 94587422 94606988 - MGP_NODShiLtJ_P0035204 Prox2 protein_coding protein_coding MGP_NODShiLtJ_T0035205.1 MGP_NODShiLtJ_G0019805.1 mouse_genomes_project 12 94594581 94596174 - Prox2 protein_coding retained_intron MGP_NODShiLtJ_T0009804.1 MGP_NODShiLtJ_G0007937.1 mouse_genomes_project 12 123666115 123666197 - Mir1247 miRNA miRNA MGP_NODShiLtJ_T0035842.1 MGP_NODShiLtJ_G0020014.1 mouse_genomes_project 12 126593955 126614860 - MGP_NODShiLtJ_P0035842 Jag2 protein_coding protein_coding MGP_NODShiLtJ_T0097924.1 MGP_NODShiLtJ_G0036336.1 mouse_genomes_project 12 132441790 132441896 + Gm24741 rRNA rRNA MGP_NODShiLtJ_T0034537.1 MGP_NODShiLtJ_G0019569.1 mouse_genomes_project 12 46875882 47113746 - MGP_NODShiLtJ_P0034537 Stxbp6 protein_coding protein_coding MGP_NODShiLtJ_T0034538.1 MGP_NODShiLtJ_G0019569.1 mouse_genomes_project 12 46878615 47114127 - MGP_NODShiLtJ_P0034538 Stxbp6 protein_coding protein_coding MGP_NODShiLtJ_T0034539.1 MGP_NODShiLtJ_G0019569.1 mouse_genomes_project 12 46884657 47049947 - Stxbp6 protein_coding processed_transcript MGP_NODShiLtJ_T0034540.1 MGP_NODShiLtJ_G0019569.1 mouse_genomes_project 12 46926130 47113788 - MGP_NODShiLtJ_P0034540 Stxbp6 protein_coding protein_coding MGP_NODShiLtJ_T0034541.1 MGP_NODShiLtJ_G0019569.1 mouse_genomes_project 12 47049914 47113952 - MGP_NODShiLtJ_P0034541 Stxbp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100004.1 MGP_NODShiLtJ_G0038398.1 mouse_genomes_project 12 73701232 73701351 - Gm23826 snoRNA snoRNA MGP_NODShiLtJ_T0000271.1 MGP_NODShiLtJ_G0000209.1 mouse_genomes_project 12 129588718 129589012 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0098775.1 MGP_NODShiLtJ_G0037169.1 mouse_genomes_project 12 87570100 87570202 - Gm25225 snRNA snRNA MGP_NODShiLtJ_T0012683.1 MGP_NODShiLtJ_G0010791.1 mouse_genomes_project 12 53272446 53273441 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034326.1 MGP_NODShiLtJ_G0019492.1 mouse_genomes_project 12 23822189 23959147 + MGP_NODShiLtJ_P0034326 Mboat2 protein_coding protein_coding MGP_NODShiLtJ_T0034327.1 MGP_NODShiLtJ_G0019492.1 mouse_genomes_project 12 23822189 23959147 + MGP_NODShiLtJ_P0034327 Mboat2 protein_coding protein_coding MGP_NODShiLtJ_T0035295.1 MGP_NODShiLtJ_G0019832.1 mouse_genomes_project 12 96759182 96804531 - MGP_NODShiLtJ_P0035295 Pomt2 protein_coding protein_coding MGP_NODShiLtJ_T0034654.1 MGP_NODShiLtJ_G0019624.1 mouse_genomes_project 12 63816426 63835848 + MGP_NODShiLtJ_P0034654 Mia2 protein_coding protein_coding MGP_NODShiLtJ_T0009771.1 MGP_NODShiLtJ_G0007904.1 mouse_genomes_project 12 123066627 123066701 + Mir679 miRNA miRNA MGP_NODShiLtJ_T0035742.1 MGP_NODShiLtJ_G0019979.1 mouse_genomes_project 12 124780452 124785767 + MGP_NODShiLtJ_P0035742 Amn protein_coding protein_coding MGP_NODShiLtJ_T0034873.1 MGP_NODShiLtJ_G0019703.1 mouse_genomes_project 12 83884668 84039529 - MGP_NODShiLtJ_P0034873 Ppp2r5e protein_coding protein_coding MGP_NODShiLtJ_T0000833.1 MGP_NODShiLtJ_G0000763.1 mouse_genomes_project 12 9142912 9143662 - TEC TEC MGP_NODShiLtJ_T0034517.1 MGP_NODShiLtJ_G0019561.1 mouse_genomes_project 12 41311404 41313885 + MGP_NODShiLtJ_P0034517 Gm7008 protein_coding protein_coding MGP_NODShiLtJ_T0034518.1 MGP_NODShiLtJ_G0019561.1 mouse_genomes_project 12 41312010 41317827 + MGP_NODShiLtJ_P0034518 Gm7008 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034519.1 MGP_NODShiLtJ_G0019561.1 mouse_genomes_project 12 41312075 41317812 + MGP_NODShiLtJ_P0034519 Gm7008 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035333.1 MGP_NODShiLtJ_G0019846.1 mouse_genomes_project 12 97598660 97600627 + MGP_NODShiLtJ_P0035333 Gm7104 protein_coding protein_coding MGP_NODShiLtJ_T0006374.1 MGP_NODShiLtJ_G0005307.1 mouse_genomes_project 12 95854953 95870195 - 4732487G21Rik lincRNA lincRNA MGP_NODShiLtJ_T0009750.1 MGP_NODShiLtJ_G0007883.1 mouse_genomes_project 12 122936723 122936793 + Mir127 miRNA miRNA MGP_NODShiLtJ_T0098780.1 MGP_NODShiLtJ_G0037174.1 mouse_genomes_project 12 104378389 104378550 + Gm23249 snRNA snRNA MGP_NODShiLtJ_T0009775.1 MGP_NODShiLtJ_G0007908.1 mouse_genomes_project 12 123069771 123069834 + Mir495 miRNA miRNA MGP_NODShiLtJ_T0009815.1 MGP_NODShiLtJ_G0007948.1 mouse_genomes_project 12 130940457 130940578 - Gm44372 miRNA miRNA MGP_NODShiLtJ_T0034716.1 MGP_NODShiLtJ_G0019643.1 mouse_genomes_project 12 77020145 77022764 + MGP_NODShiLtJ_P0034716 Mgat2 protein_coding protein_coding MGP_NODShiLtJ_T0000844.1 MGP_NODShiLtJ_G0000774.1 mouse_genomes_project 12 94601336 94602906 - TEC TEC MGP_NODShiLtJ_T0034573.1 MGP_NODShiLtJ_G0019587.1 mouse_genomes_project 12 56613414 57113138 + MGP_NODShiLtJ_P0034573 Akap6 protein_coding protein_coding MGP_NODShiLtJ_T0000069.1 MGP_NODShiLtJ_G0000054.1 mouse_genomes_project 12 127795364 127795886 - MGP_NODShiLtJ_P0000069 Ighv5-17 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035105.1 MGP_NODShiLtJ_G0019775.1 mouse_genomes_project 12 93356274 93387326 - MGP_NODShiLtJ_P0035105 Heatr4 protein_coding protein_coding MGP_NODShiLtJ_T0034159.1 MGP_NODShiLtJ_G0019433.1 mouse_genomes_project 12 1878547 1890461 - Mfsd2b protein_coding retained_intron MGP_NODShiLtJ_T0034160.1 MGP_NODShiLtJ_G0019433.1 mouse_genomes_project 12 1878547 1890464 - MGP_NODShiLtJ_P0034160 Mfsd2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034161.1 MGP_NODShiLtJ_G0019433.1 mouse_genomes_project 12 1879179 1890451 - Mfsd2b protein_coding retained_intron MGP_NODShiLtJ_T0034162.1 MGP_NODShiLtJ_G0019433.1 mouse_genomes_project 12 1879179 1890464 - MGP_NODShiLtJ_P0034162 Mfsd2b protein_coding protein_coding MGP_NODShiLtJ_T0034163.1 MGP_NODShiLtJ_G0019433.1 mouse_genomes_project 12 1879179 1890464 - MGP_NODShiLtJ_P0034163 Mfsd2b protein_coding protein_coding MGP_NODShiLtJ_T0034164.1 MGP_NODShiLtJ_G0019433.1 mouse_genomes_project 12 1879672 1890465 - Mfsd2b protein_coding retained_intron MGP_NODShiLtJ_T0034165.1 MGP_NODShiLtJ_G0019433.1 mouse_genomes_project 12 1883341 1885367 - Mfsd2b protein_coding retained_intron MGP_NODShiLtJ_T0034166.1 MGP_NODShiLtJ_G0019433.1 mouse_genomes_project 12 1885053 1890465 - MGP_NODShiLtJ_P0034166 Mfsd2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006419.1 MGP_NODShiLtJ_G0005337.1 mouse_genomes_project 12 122906549 122909654 - Gm26906 lincRNA lincRNA MGP_NODShiLtJ_T0034567.1 MGP_NODShiLtJ_G0019584.1 mouse_genomes_project 12 55845826 55851093 - MGP_NODShiLtJ_P0034567 Gpr33 protein_coding protein_coding MGP_NODShiLtJ_T0003345.1 MGP_NODShiLtJ_G0003069.1 mouse_genomes_project 12 61919863 61928810 - Gm16246 antisense antisense MGP_NODShiLtJ_T0034382.1 MGP_NODShiLtJ_G0019517.1 mouse_genomes_project 12 30731450 30735017 + Lamb1 protein_coding retained_intron MGP_NODShiLtJ_T0034383.1 MGP_NODShiLtJ_G0019517.1 mouse_genomes_project 12 30731453 30732950 + MGP_NODShiLtJ_P0034383 Lamb1 protein_coding protein_coding MGP_NODShiLtJ_T0034384.1 MGP_NODShiLtJ_G0019517.1 mouse_genomes_project 12 30731556 30796895 + MGP_NODShiLtJ_P0034384 Lamb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034385.1 MGP_NODShiLtJ_G0019517.1 mouse_genomes_project 12 30731577 30799464 + MGP_NODShiLtJ_P0034385 Lamb1 protein_coding protein_coding MGP_NODShiLtJ_T0034386.1 MGP_NODShiLtJ_G0019517.1 mouse_genomes_project 12 30743902 30755288 + Lamb1 protein_coding retained_intron MGP_NODShiLtJ_T0034387.1 MGP_NODShiLtJ_G0019517.1 mouse_genomes_project 12 30745421 30746186 + Lamb1 protein_coding retained_intron MGP_NODShiLtJ_T0034388.1 MGP_NODShiLtJ_G0019517.1 mouse_genomes_project 12 30790794 30791728 + Lamb1 protein_coding retained_intron MGP_NODShiLtJ_T0003368.1 MGP_NODShiLtJ_G0003089.1 mouse_genomes_project 12 114957962 114963799 + Gm20069 antisense antisense MGP_NODShiLtJ_T0034826.1 MGP_NODShiLtJ_G0019681.1 mouse_genomes_project 12 80623329 80669320 + MGP_NODShiLtJ_P0034826 Pcnx4 protein_coding protein_coding MGP_NODShiLtJ_T0000247.1 MGP_NODShiLtJ_G0000185.1 mouse_genomes_project 12 128362291 128362585 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000022.1 MGP_NODShiLtJ_G0000016.1 mouse_genomes_project 12 127192355 127192366 - MGP_NODShiLtJ_P0000022 Ighd4-1 IG_D_gene IG_D_gene MGP_NODShiLtJ_T0017188.1 MGP_NODShiLtJ_G0015109.1 mouse_genomes_project 12 115025040 115082521 - Gm28373 processed_transcript processed_transcript MGP_NODShiLtJ_T0011221.1 MGP_NODShiLtJ_G0009354.1 mouse_genomes_project 12 79731563 79731866 + Gm22959 misc_RNA misc_RNA MGP_NODShiLtJ_T0012735.1 MGP_NODShiLtJ_G0010843.1 mouse_genomes_project 12 125434497 125436595 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035451.1 MGP_NODShiLtJ_G0019878.1 mouse_genomes_project 12 113019337 113053731 - MGP_NODShiLtJ_P0035451 Gpr68 protein_coding protein_coding MGP_NODShiLtJ_T0035452.1 MGP_NODShiLtJ_G0019878.1 mouse_genomes_project 12 113019340 113053714 - MGP_NODShiLtJ_P0035452 Gpr68 protein_coding protein_coding MGP_NODShiLtJ_T0035453.1 MGP_NODShiLtJ_G0019878.1 mouse_genomes_project 12 113019340 113044212 - MGP_NODShiLtJ_P0035453 Gpr68 protein_coding protein_coding MGP_NODShiLtJ_T0035454.1 MGP_NODShiLtJ_G0019878.1 mouse_genomes_project 12 113021971 113044186 - Gpr68 protein_coding processed_transcript MGP_NODShiLtJ_T0035456.1 MGP_NODShiLtJ_G0019878.1 mouse_genomes_project 12 113032366 113053731 - Gpr68 protein_coding processed_transcript MGP_NODShiLtJ_T0035457.1 MGP_NODShiLtJ_G0019878.1 mouse_genomes_project 12 113032554 113044212 - Gpr68 protein_coding processed_transcript MGP_NODShiLtJ_T0034530.1 MGP_NODShiLtJ_G0019567.1 mouse_genomes_project 12 46264119 46314285 + MGP_NODShiLtJ_P0034530 Pnpla8 protein_coding protein_coding MGP_NODShiLtJ_T0034531.1 MGP_NODShiLtJ_G0019567.1 mouse_genomes_project 12 46270371 46279729 + MGP_NODShiLtJ_P0034531 Pnpla8 protein_coding protein_coding MGP_NODShiLtJ_T0034532.1 MGP_NODShiLtJ_G0019567.1 mouse_genomes_project 12 46279411 46309572 + MGP_NODShiLtJ_P0034532 Pnpla8 protein_coding protein_coding MGP_NODShiLtJ_T0034533.1 MGP_NODShiLtJ_G0019567.1 mouse_genomes_project 12 46295224 46309080 + MGP_NODShiLtJ_P0034533 Pnpla8 protein_coding protein_coding MGP_NODShiLtJ_T0097754.1 MGP_NODShiLtJ_G0036166.1 mouse_genomes_project 12 93867618 93869002 + pseudogene pseudogene MGP_NODShiLtJ_T0100001.1 MGP_NODShiLtJ_G0038395.1 mouse_genomes_project 12 72255996 72256121 - Gm26015 snoRNA snoRNA MGP_NODShiLtJ_T0000007.1 MGP_NODShiLtJ_G0000005.1 mouse_genomes_project 12 127060822 127062471 - MGP_NODShiLtJ_P0000007 Ighg2b IG_C_gene IG_C_gene MGP_NODShiLtJ_T0035560.1 MGP_NODShiLtJ_G0019914.1 mouse_genomes_project 12 116525769 116536779 - MGP_NODShiLtJ_P0035560 Serpina11 protein_coding protein_coding MGP_NODShiLtJ_T0035561.1 MGP_NODShiLtJ_G0019914.1 mouse_genomes_project 12 116525781 116536749 - MGP_NODShiLtJ_P0035561 Serpina11 protein_coding protein_coding MGP_NODShiLtJ_T0035562.1 MGP_NODShiLtJ_G0019914.1 mouse_genomes_project 12 116530183 116536741 - MGP_NODShiLtJ_P0035562 Serpina11 protein_coding protein_coding MGP_NODShiLtJ_T0035563.1 MGP_NODShiLtJ_G0019914.1 mouse_genomes_project 12 116530269 116536739 - MGP_NODShiLtJ_P0035563 Serpina11 protein_coding protein_coding MGP_NODShiLtJ_T0035564.1 MGP_NODShiLtJ_G0019914.1 mouse_genomes_project 12 116531408 116536763 - Serpina11 protein_coding processed_transcript MGP_NODShiLtJ_T0035009.1 MGP_NODShiLtJ_G0019755.1 mouse_genomes_project 12 90472252 90483405 - MGP_NODShiLtJ_P0035009 Gm4787 protein_coding protein_coding MGP_NODShiLtJ_T0034787.1 MGP_NODShiLtJ_G0019669.1 mouse_genomes_project 12 79010071 79085443 + MGP_NODShiLtJ_P0034787 Arid4a protein_coding protein_coding MGP_NODShiLtJ_T0034788.1 MGP_NODShiLtJ_G0019669.1 mouse_genomes_project 12 79010110 79063516 + Arid4a protein_coding processed_transcript MGP_NODShiLtJ_T0034789.1 MGP_NODShiLtJ_G0019669.1 mouse_genomes_project 12 79010789 79043169 + MGP_NODShiLtJ_P0034789 Arid4a protein_coding protein_coding MGP_NODShiLtJ_T0034790.1 MGP_NODShiLtJ_G0019669.1 mouse_genomes_project 12 79044170 79073731 + MGP_NODShiLtJ_P0034790 Arid4a protein_coding protein_coding MGP_NODShiLtJ_T0034084.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453372 688807 + MGP_NODShiLtJ_P0034084 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034085.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453382 688409 + MGP_NODShiLtJ_P0034085 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034086.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453408 688370 + MGP_NODShiLtJ_P0034086 Dtnb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034087.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453424 688409 + MGP_NODShiLtJ_P0034087 Dtnb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034088.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453425 540712 + MGP_NODShiLtJ_P0034088 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034089.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453426 619049 + Dtnb protein_coding retained_intron MGP_NODShiLtJ_T0034090.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453444 688406 + MGP_NODShiLtJ_P0034090 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034091.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453454 688153 + MGP_NODShiLtJ_P0034091 Dtnb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034092.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453456 688404 + MGP_NODShiLtJ_P0034092 Dtnb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034093.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453457 553837 + Dtnb protein_coding processed_transcript MGP_NODShiLtJ_T0034094.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453461 688406 + MGP_NODShiLtJ_P0034094 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034095.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453466 688406 + MGP_NODShiLtJ_P0034095 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034096.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453514 688516 + MGP_NODShiLtJ_P0034096 Dtnb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034097.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453527 485980 + MGP_NODShiLtJ_P0034097 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034098.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453611 658549 + MGP_NODShiLtJ_P0034098 Dtnb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034099.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 453975 688402 + MGP_NODShiLtJ_P0034099 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034100.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 475541 688406 + MGP_NODShiLtJ_P0034100 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034101.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 512285 681607 + MGP_NODShiLtJ_P0034101 Dtnb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034102.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 525326 688406 + MGP_NODShiLtJ_P0034102 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034103.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 578808 616928 + Dtnb protein_coding retained_intron MGP_NODShiLtJ_T0034104.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 617499 656119 + Dtnb protein_coding processed_transcript MGP_NODShiLtJ_T0034105.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 655933 688153 + Dtnb protein_coding retained_intron MGP_NODShiLtJ_T0034106.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 656187 688409 + MGP_NODShiLtJ_P0034106 Dtnb protein_coding protein_coding MGP_NODShiLtJ_T0034107.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 681329 688409 + Dtnb protein_coding processed_transcript MGP_NODShiLtJ_T0034108.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 681539 688408 + Dtnb protein_coding retained_intron MGP_NODShiLtJ_T0034109.1 MGP_NODShiLtJ_G0019414.1 mouse_genomes_project 12 686562 688409 + Dtnb protein_coding retained_intron MGP_NODShiLtJ_T0012695.1 MGP_NODShiLtJ_G0010803.1 mouse_genomes_project 12 66849724 66850253 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000021.1 MGP_NODShiLtJ_G0000015.1 mouse_genomes_project 12 127067900 127070066 + IG_C_pseudogene IG_C_pseudogene MGP_NODShiLtJ_T0000276.1 MGP_NODShiLtJ_G0000214.1 mouse_genomes_project 12 130677935 130678247 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035115.1 MGP_NODShiLtJ_G0019782.1 mouse_genomes_project 12 93542205 93567669 + Dnal1 protein_coding processed_transcript MGP_NODShiLtJ_T0035116.1 MGP_NODShiLtJ_G0019782.1 mouse_genomes_project 12 93542205 93571246 + MGP_NODShiLtJ_P0035116 Dnal1 protein_coding protein_coding MGP_NODShiLtJ_T0035117.1 MGP_NODShiLtJ_G0019782.1 mouse_genomes_project 12 93542210 93566288 + MGP_NODShiLtJ_P0035117 Dnal1 protein_coding protein_coding MGP_NODShiLtJ_T0035118.1 MGP_NODShiLtJ_G0019782.1 mouse_genomes_project 12 93542229 93568587 + MGP_NODShiLtJ_P0035118 Dnal1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035119.1 MGP_NODShiLtJ_G0019782.1 mouse_genomes_project 12 93542230 93561806 + MGP_NODShiLtJ_P0035119 Dnal1 protein_coding protein_coding MGP_NODShiLtJ_T0035120.1 MGP_NODShiLtJ_G0019782.1 mouse_genomes_project 12 93554731 93575227 + Dnal1 protein_coding retained_intron MGP_NODShiLtJ_T0035121.1 MGP_NODShiLtJ_G0019782.1 mouse_genomes_project 12 93563508 93564948 + MGP_NODShiLtJ_P0035121 Dnal1 protein_coding protein_coding MGP_NODShiLtJ_T0034449.1 MGP_NODShiLtJ_G0019536.1 mouse_genomes_project 12 33692473 33693359 + MGP_NODShiLtJ_P0034449 Ferd3l protein_coding protein_coding MGP_NODShiLtJ_T0009746.1 MGP_NODShiLtJ_G0007879.1 mouse_genomes_project 12 122929599 122929688 + Mir3070a miRNA miRNA MGP_NODShiLtJ_T0000233.1 MGP_NODShiLtJ_G0000171.1 mouse_genomes_project 12 127370944 127371420 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0006324.1 MGP_NODShiLtJ_G0005268.1 mouse_genomes_project 12 4800873 4809153 - 1700101O22Rik lincRNA lincRNA MGP_NODShiLtJ_T0035845.1 MGP_NODShiLtJ_G0020017.1 mouse_genomes_project 12 126663886 126666335 + MGP_NODShiLtJ_P0035845 Btbd6 protein_coding protein_coding MGP_NODShiLtJ_T0035846.1 MGP_NODShiLtJ_G0020017.1 mouse_genomes_project 12 126663967 126666335 + MGP_NODShiLtJ_P0035846 Btbd6 protein_coding protein_coding MGP_NODShiLtJ_T0101587.1 MGP_NODShiLtJ_G0039756.1 mouse_genomes_project 12 116332901 116467654 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0034713.1 MGP_NODShiLtJ_G0019642.1 mouse_genomes_project 12 77016836 77019975 - MGP_NODShiLtJ_P0034713 Rpl36al protein_coding protein_coding MGP_NODShiLtJ_T0034714.1 MGP_NODShiLtJ_G0019642.1 mouse_genomes_project 12 77016843 77020002 - MGP_NODShiLtJ_P0034714 Rpl36al protein_coding protein_coding MGP_NODShiLtJ_T0034715.1 MGP_NODShiLtJ_G0019642.1 mouse_genomes_project 12 77016846 77020072 - MGP_NODShiLtJ_P0034715 Rpl36al protein_coding protein_coding MGP_NODShiLtJ_T0009693.1 MGP_NODShiLtJ_G0007826.1 mouse_genomes_project 12 25492754 25492864 - Mir6538 miRNA miRNA MGP_NODShiLtJ_T0000268.1 MGP_NODShiLtJ_G0000206.1 mouse_genomes_project 12 129512019 129512453 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035495.1 MGP_NODShiLtJ_G0019891.1 mouse_genomes_project 12 115074322 115116515 - MGP_NODShiLtJ_P0035495 Gm28051 protein_coding protein_coding MGP_NODShiLtJ_T0035665.1 MGP_NODShiLtJ_G0019957.1 mouse_genomes_project 12 122069894 122095732 + MGP_NODShiLtJ_P0035665 Yy1 protein_coding protein_coding MGP_NODShiLtJ_T0035666.1 MGP_NODShiLtJ_G0019957.1 mouse_genomes_project 12 122085484 122094663 + Yy1 protein_coding retained_intron MGP_NODShiLtJ_T0011210.1 MGP_NODShiLtJ_G0009343.1 mouse_genomes_project 12 9642900 9643208 - Gm23781 misc_RNA misc_RNA MGP_NODShiLtJ_T0035261.1 MGP_NODShiLtJ_G0019823.1 mouse_genomes_project 12 95801730 95855607 + MGP_NODShiLtJ_P0035261 Gpatch2l protein_coding protein_coding MGP_NODShiLtJ_T0009718.1 MGP_NODShiLtJ_G0007851.1 mouse_genomes_project 12 89393387 89393452 - Mir1843a miRNA miRNA MGP_NODShiLtJ_T0034952.1 MGP_NODShiLtJ_G0019732.1 mouse_genomes_project 12 87942052 87952475 - MGP_NODShiLtJ_P0034952 Pigh protein_coding protein_coding MGP_NODShiLtJ_T0009794.1 MGP_NODShiLtJ_G0007927.1 mouse_genomes_project 12 123090431 123090497 + Mir154 miRNA miRNA MGP_NODShiLtJ_T0034266.1 MGP_NODShiLtJ_G0019474.1 mouse_genomes_project 12 15761750 15766548 - MGP_NODShiLtJ_P0034266 Kcnf1 protein_coding protein_coding MGP_NODShiLtJ_T0034903.1 MGP_NODShiLtJ_G0019711.1 mouse_genomes_project 12 84877006 84886305 - MGP_NODShiLtJ_P0034903 Zbtb25 protein_coding protein_coding MGP_NODShiLtJ_T0034904.1 MGP_NODShiLtJ_G0019711.1 mouse_genomes_project 12 84878068 84898552 - MGP_NODShiLtJ_P0034904 Zbtb25 protein_coding protein_coding MGP_NODShiLtJ_T0034905.1 MGP_NODShiLtJ_G0019711.1 mouse_genomes_project 12 84878112 84898087 - MGP_NODShiLtJ_P0034905 Zbtb25 protein_coding protein_coding MGP_NODShiLtJ_T0034906.1 MGP_NODShiLtJ_G0019711.1 mouse_genomes_project 12 84878113 84898690 - MGP_NODShiLtJ_P0034906 Zbtb25 protein_coding protein_coding MGP_NODShiLtJ_T0034907.1 MGP_NODShiLtJ_G0019711.1 mouse_genomes_project 12 84879194 84898481 - MGP_NODShiLtJ_P0034907 Zbtb25 protein_coding protein_coding MGP_NODShiLtJ_T0034908.1 MGP_NODShiLtJ_G0019711.1 mouse_genomes_project 12 84879311 84898552 - MGP_NODShiLtJ_P0034908 Zbtb25 protein_coding protein_coding MGP_NODShiLtJ_T0035462.1 MGP_NODShiLtJ_G0019881.1 mouse_genomes_project 12 114015929 114096140 - MGP_NODShiLtJ_P0035462 Fbln5 protein_coding protein_coding MGP_NODShiLtJ_T0034177.1 MGP_NODShiLtJ_G0019438.1 mouse_genomes_project 12 5712951 5809799 + MGP_NODShiLtJ_P0034177 Ldah protein_coding protein_coding MGP_NODShiLtJ_T0098751.1 MGP_NODShiLtJ_G0037145.1 mouse_genomes_project 12 55539386 55539488 - Gm22663 snRNA snRNA MGP_NODShiLtJ_T0009777.1 MGP_NODShiLtJ_G0007910.1 mouse_genomes_project 12 123073689 123073775 + Mir376c miRNA miRNA MGP_NODShiLtJ_T0034543.1 MGP_NODShiLtJ_G0019571.1 mouse_genomes_project 12 50634793 50635906 + MGP_NODShiLtJ_P0034543 protein_coding protein_coding MGP_NODShiLtJ_T0034675.1 MGP_NODShiLtJ_G0019626.1 mouse_genomes_project 12 63931154 63952175 - MGP_NODShiLtJ_P0034675 Fbxo33 protein_coding protein_coding MGP_NODShiLtJ_T0034676.1 MGP_NODShiLtJ_G0019626.1 mouse_genomes_project 12 63931156 63934937 - MGP_NODShiLtJ_P0034676 Fbxo33 protein_coding protein_coding MGP_NODShiLtJ_T0034677.1 MGP_NODShiLtJ_G0019626.1 mouse_genomes_project 12 63931157 63936196 - Fbxo33 protein_coding retained_intron MGP_NODShiLtJ_T0034678.1 MGP_NODShiLtJ_G0019626.1 mouse_genomes_project 12 63935052 63951251 - MGP_NODShiLtJ_P0034678 Fbxo33 protein_coding protein_coding MGP_NODShiLtJ_T0035797.1 MGP_NODShiLtJ_G0019996.1 mouse_genomes_project 12 125556831 125656728 + MGP_NODShiLtJ_P0035797 Tdrd9 protein_coding protein_coding MGP_NODShiLtJ_T0035803.1 MGP_NODShiLtJ_G0019996.1 mouse_genomes_project 12 125566749 125656323 + MGP_NODShiLtJ_P0035803 Tdrd9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035804.1 MGP_NODShiLtJ_G0019996.1 mouse_genomes_project 12 125578875 125656224 + MGP_NODShiLtJ_P0035804 Tdrd9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035805.1 MGP_NODShiLtJ_G0019996.1 mouse_genomes_project 12 125578875 125656224 + MGP_NODShiLtJ_P0035805 Tdrd9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035806.1 MGP_NODShiLtJ_G0019996.1 mouse_genomes_project 12 125598329 125616530 + Tdrd9 protein_coding retained_intron MGP_NODShiLtJ_T0035807.1 MGP_NODShiLtJ_G0019996.1 mouse_genomes_project 12 125616973 125631516 + Tdrd9 protein_coding processed_transcript MGP_NODShiLtJ_T0035808.1 MGP_NODShiLtJ_G0019996.1 mouse_genomes_project 12 125651035 125655494 + Tdrd9 protein_coding retained_intron MGP_NODShiLtJ_T0012688.1 MGP_NODShiLtJ_G0010796.1 mouse_genomes_project 12 59613864 59614387 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017212.1 MGP_NODShiLtJ_G0015114.1 mouse_genomes_project 12 132001164 132007845 - Gm10421 processed_transcript antisense MGP_NODShiLtJ_T0017213.1 MGP_NODShiLtJ_G0015114.1 mouse_genomes_project 12 132002006 132007899 - Gm10421 processed_transcript retained_intron MGP_NODShiLtJ_T0017214.1 MGP_NODShiLtJ_G0015114.1 mouse_genomes_project 12 132007719 132008281 - Gm10421 processed_transcript antisense MGP_NODShiLtJ_T0012706.1 MGP_NODShiLtJ_G0010814.1 mouse_genomes_project 12 88028414 88028762 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035268.1 MGP_NODShiLtJ_G0019825.1 mouse_genomes_project 12 96278717 96292056 + MGP_NODShiLtJ_P0035268 Vash1 protein_coding protein_coding MGP_NODShiLtJ_T0006326.1 MGP_NODShiLtJ_G0005270.1 mouse_genomes_project 12 6480238 6484511 - 9930038B18Rik lincRNA lincRNA MGP_NODShiLtJ_T0000010.1 MGP_NODShiLtJ_G0000007.1 mouse_genomes_project 12 127116430 127118088 - MGP_NODShiLtJ_P0000010 Ighg3 IG_C_gene IG_C_gene MGP_NODShiLtJ_T0034353.1 MGP_NODShiLtJ_G0019506.1 mouse_genomes_project 12 28045317 28167153 + MGP_NODShiLtJ_P0034353 Tssc1 protein_coding protein_coding MGP_NODShiLtJ_T0035544.1 MGP_NODShiLtJ_G0019907.1 mouse_genomes_project 12 115872209 115873723 - MGP_NODShiLtJ_P0035544 Ifi27l2a protein_coding protein_coding MGP_NODShiLtJ_T0034740.1 MGP_NODShiLtJ_G0019655.1 mouse_genomes_project 12 77608552 77637862 + MGP_NODShiLtJ_P0034740 Atp5s protein_coding protein_coding MGP_NODShiLtJ_T0009793.1 MGP_NODShiLtJ_G0007926.1 mouse_genomes_project 12 123086625 123086707 + Mir453 miRNA miRNA MGP_NODShiLtJ_T0009801.1 MGP_NODShiLtJ_G0007934.1 mouse_genomes_project 12 123095415 123095494 + Mir369 miRNA miRNA MGP_NODShiLtJ_T0034330.1 MGP_NODShiLtJ_G0019494.1 mouse_genomes_project 12 24108532 24110826 - MGP_NODShiLtJ_P0034330 Id2 protein_coding protein_coding MGP_NODShiLtJ_T0034691.1 MGP_NODShiLtJ_G0019634.1 mouse_genomes_project 12 71872338 71883793 - MGP_NODShiLtJ_P0034691 Fkbp3 protein_coding protein_coding MGP_NODShiLtJ_T0035160.1 MGP_NODShiLtJ_G0019790.1 mouse_genomes_project 12 93858106 93885141 + MGP_NODShiLtJ_P0035160 Bbof1 protein_coding protein_coding MGP_NODShiLtJ_T0035161.1 MGP_NODShiLtJ_G0019790.1 mouse_genomes_project 12 93862817 93879782 + MGP_NODShiLtJ_P0035161 Bbof1 protein_coding protein_coding MGP_NODShiLtJ_T0035163.1 MGP_NODShiLtJ_G0019790.1 mouse_genomes_project 12 93870398 93881741 + MGP_NODShiLtJ_P0035163 Bbof1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035027.1 MGP_NODShiLtJ_G0019758.1 mouse_genomes_project 12 90696962 90705939 - MGP_NODShiLtJ_P0035027 Adam21 protein_coding protein_coding MGP_NODShiLtJ_T0099990.1 MGP_NODShiLtJ_G0038384.1 mouse_genomes_project 12 47155256 47155387 + Gm24731 snoRNA snoRNA MGP_NODShiLtJ_T0012674.1 MGP_NODShiLtJ_G0010782.1 mouse_genomes_project 12 846218 846737 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009723.1 MGP_NODShiLtJ_G0007856.1 mouse_genomes_project 12 96943178 96943254 + miRNA miRNA MGP_NODShiLtJ_T0034911.1 MGP_NODShiLtJ_G0019714.1 mouse_genomes_project 12 84949217 84971181 + MGP_NODShiLtJ_P0034911 Ppp1r36 protein_coding protein_coding MGP_NODShiLtJ_T0100018.1 MGP_NODShiLtJ_G0038412.1 mouse_genomes_project 12 122979899 122979974 + Gm23474 snoRNA snoRNA MGP_NODShiLtJ_T0035809.1 MGP_NODShiLtJ_G0019998.1 mouse_genomes_project 12 125710979 125731870 + MGP_NODShiLtJ_P0035809 Aspg protein_coding protein_coding MGP_NODShiLtJ_T0034802.1 MGP_NODShiLtJ_G0019676.1 mouse_genomes_project 12 80099456 80112023 - MGP_NODShiLtJ_P0034802 L3hypdh protein_coding protein_coding MGP_NODShiLtJ_T0034803.1 MGP_NODShiLtJ_G0019676.1 mouse_genomes_project 12 80102524 80112023 - L3hypdh protein_coding retained_intron MGP_NODShiLtJ_T0034804.1 MGP_NODShiLtJ_G0019676.1 mouse_genomes_project 12 80103292 80111602 - L3hypdh protein_coding processed_transcript MGP_NODShiLtJ_T0003371.1 MGP_NODShiLtJ_G0003091.1 mouse_genomes_project 12 115755171 115767340 + Gm15523 antisense antisense MGP_NODShiLtJ_T0009719.1 MGP_NODShiLtJ_G0007852.1 mouse_genomes_project 12 90249590 90249674 + Mir3067 miRNA miRNA MGP_NODShiLtJ_T0006329.1 MGP_NODShiLtJ_G0005273.1 mouse_genomes_project 12 10853474 10859788 + Platr19 lincRNA lincRNA MGP_NODShiLtJ_T0012733.1 MGP_NODShiLtJ_G0010841.1 mouse_genomes_project 12 120789853 120790695 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012722.1 MGP_NODShiLtJ_G0010830.1 mouse_genomes_project 12 113005724 113006195 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034876.1 MGP_NODShiLtJ_G0019705.1 mouse_genomes_project 12 84167487 84190779 - MGP_NODShiLtJ_P0034876 Sgpp1 protein_coding protein_coding MGP_NODShiLtJ_T0035918.1 MGP_NODShiLtJ_G0020040.1 mouse_genomes_project 12 135139778 135235950 + MGP_NODShiLtJ_P0035918 Tmem196 protein_coding protein_coding MGP_NODShiLtJ_T0035919.1 MGP_NODShiLtJ_G0020040.1 mouse_genomes_project 12 135140230 135235694 + MGP_NODShiLtJ_P0035919 Tmem196 protein_coding protein_coding MGP_NODShiLtJ_T0035920.1 MGP_NODShiLtJ_G0020040.1 mouse_genomes_project 12 135140378 135235587 + MGP_NODShiLtJ_P0035920 Tmem196 protein_coding protein_coding MGP_NODShiLtJ_T0035921.1 MGP_NODShiLtJ_G0020040.1 mouse_genomes_project 12 135140390 135235935 + MGP_NODShiLtJ_P0035921 Tmem196 protein_coding protein_coding MGP_NODShiLtJ_T0035588.1 MGP_NODShiLtJ_G0019928.1 mouse_genomes_project 12 117267793 117270786 + MGP_NODShiLtJ_P0035588 Gm1000 protein_coding protein_coding MGP_NODShiLtJ_T0097914.1 MGP_NODShiLtJ_G0036326.1 mouse_genomes_project 12 60360645 60360765 - Gm23799 rRNA rRNA MGP_NODShiLtJ_T0097919.1 MGP_NODShiLtJ_G0036331.1 mouse_genomes_project 12 95245098 95245217 - n-R5s64 rRNA rRNA MGP_NODShiLtJ_T0035287.1 MGP_NODShiLtJ_G0019830.1 mouse_genomes_project 12 96666989 96740665 + MGP_NODShiLtJ_P0035287 Tmem63c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035288.1 MGP_NODShiLtJ_G0019830.1 mouse_genomes_project 12 96671889 96740660 + MGP_NODShiLtJ_P0035288 Tmem63c protein_coding protein_coding MGP_NODShiLtJ_T0035289.1 MGP_NODShiLtJ_G0019830.1 mouse_genomes_project 12 96672161 96740655 + MGP_NODShiLtJ_P0035289 Tmem63c protein_coding protein_coding MGP_NODShiLtJ_T0035290.1 MGP_NODShiLtJ_G0019830.1 mouse_genomes_project 12 96672213 96706735 + MGP_NODShiLtJ_P0035290 Tmem63c protein_coding protein_coding MGP_NODShiLtJ_T0035291.1 MGP_NODShiLtJ_G0019830.1 mouse_genomes_project 12 96686187 96740663 + MGP_NODShiLtJ_P0035291 Tmem63c protein_coding protein_coding MGP_NODShiLtJ_T0000028.1 MGP_NODShiLtJ_G0000022.1 mouse_genomes_project 12 127304401 127304424 - MGP_NODShiLtJ_P0000028 Gm16968 IG_D_gene IG_D_gene MGP_NODShiLtJ_T0000236.1 MGP_NODShiLtJ_G0000174.1 mouse_genomes_project 12 127666071 127666452 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000845.1 MGP_NODShiLtJ_G0000775.1 mouse_genomes_project 12 95615530 95616137 + TEC TEC MGP_NODShiLtJ_T0000840.1 MGP_NODShiLtJ_G0000770.1 mouse_genomes_project 12 81104871 81105691 + TEC TEC MGP_NODShiLtJ_T0034474.1 MGP_NODShiLtJ_G0019550.1 mouse_genomes_project 12 36365540 36369824 + MGP_NODShiLtJ_P0034474 Sostdc1 protein_coding protein_coding MGP_NODShiLtJ_T0035726.1 MGP_NODShiLtJ_G0019973.1 mouse_genomes_project 12 124344817 124362719 - MGP_NODShiLtJ_P0035726 Cinp protein_coding protein_coding MGP_NODShiLtJ_T0035330.1 MGP_NODShiLtJ_G0019843.1 mouse_genomes_project 12 97144248 97166939 - MGP_NODShiLtJ_P0035330 Snw1 protein_coding protein_coding MGP_NODShiLtJ_T0011217.1 MGP_NODShiLtJ_G0009350.1 mouse_genomes_project 12 76992042 76992342 + Rn7s1 misc_RNA misc_RNA MGP_NODShiLtJ_T0035334.1 MGP_NODShiLtJ_G0019847.1 mouse_genomes_project 12 97776786 97777220 + MGP_NODShiLtJ_P0035334 protein_coding protein_coding MGP_NODShiLtJ_T0012696.1 MGP_NODShiLtJ_G0010804.1 mouse_genomes_project 12 68939809 68941671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034756.1 MGP_NODShiLtJ_G0019661.1 mouse_genomes_project 12 77932051 78028057 - MGP_NODShiLtJ_P0034756 Nin protein_coding protein_coding MGP_NODShiLtJ_T0034757.1 MGP_NODShiLtJ_G0019661.1 mouse_genomes_project 12 77939354 78028078 - MGP_NODShiLtJ_P0034757 Nin protein_coding protein_coding MGP_NODShiLtJ_T0034758.1 MGP_NODShiLtJ_G0019661.1 mouse_genomes_project 12 77939355 78037149 - MGP_NODShiLtJ_P0034758 Nin protein_coding protein_coding MGP_NODShiLtJ_T0034759.1 MGP_NODShiLtJ_G0019661.1 mouse_genomes_project 12 77939375 78037144 - MGP_NODShiLtJ_P0034759 Nin protein_coding protein_coding MGP_NODShiLtJ_T0035694.1 MGP_NODShiLtJ_G0019965.1 mouse_genomes_project 12 123667135 123669164 + MGP_NODShiLtJ_P0035694 protein_coding protein_coding MGP_NODShiLtJ_T0035695.1 MGP_NODShiLtJ_G0019965.1 mouse_genomes_project 12 123667327 123668776 + MGP_NODShiLtJ_P0035695 protein_coding protein_coding MGP_NODShiLtJ_T0099987.1 MGP_NODShiLtJ_G0038381.1 mouse_genomes_project 12 40601251 40601383 + Gm24434 snoRNA snoRNA MGP_NODShiLtJ_T0009756.1 MGP_NODShiLtJ_G0007889.1 mouse_genomes_project 12 122956537 122956657 + Mir1188 miRNA miRNA MGP_NODShiLtJ_T0034295.1 MGP_NODShiLtJ_G0019484.1 mouse_genomes_project 12 20133876 20188629 - MGP_NODShiLtJ_P0034295 Adam17 protein_coding protein_coding MGP_NODShiLtJ_T0034296.1 MGP_NODShiLtJ_G0019484.1 mouse_genomes_project 12 20133884 20188668 - MGP_NODShiLtJ_P0034296 Adam17 protein_coding protein_coding MGP_NODShiLtJ_T0034297.1 MGP_NODShiLtJ_G0019484.1 mouse_genomes_project 12 20133884 20188629 - MGP_NODShiLtJ_P0034297 Adam17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034298.1 MGP_NODShiLtJ_G0019484.1 mouse_genomes_project 12 20133884 20188629 - MGP_NODShiLtJ_P0034298 Adam17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034299.1 MGP_NODShiLtJ_G0019484.1 mouse_genomes_project 12 20135892 20139680 - Adam17 protein_coding processed_transcript MGP_NODShiLtJ_T0034300.1 MGP_NODShiLtJ_G0019484.1 mouse_genomes_project 12 20138377 20156595 - Adam17 protein_coding retained_intron MGP_NODShiLtJ_T0034301.1 MGP_NODShiLtJ_G0019484.1 mouse_genomes_project 12 20140462 20142908 - Adam17 protein_coding retained_intron MGP_NODShiLtJ_T0034302.1 MGP_NODShiLtJ_G0019484.1 mouse_genomes_project 12 20165039 20188570 - MGP_NODShiLtJ_P0034302 Adam17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003334.1 MGP_NODShiLtJ_G0003060.1 mouse_genomes_project 12 29396976 29399441 + Gm15691 antisense antisense MGP_NODShiLtJ_T0035354.1 MGP_NODShiLtJ_G0019852.1 mouse_genomes_project 12 100884494 100898430 - MGP_NODShiLtJ_P0035354 Dio2 protein_coding protein_coding MGP_NODShiLtJ_T0035595.1 MGP_NODShiLtJ_G0019934.1 mouse_genomes_project 12 118016523 118078497 + MGP_NODShiLtJ_P0035595 Tcl1b2 protein_coding protein_coding MGP_NODShiLtJ_T0035598.1 MGP_NODShiLtJ_G0019934.1 mouse_genomes_project 12 118069558 118094089 + MGP_NODShiLtJ_P0035598 Tcl1b2 protein_coding protein_coding MGP_NODShiLtJ_T0100034.1 MGP_NODShiLtJ_G0038428.1 mouse_genomes_project 12 123031069 123031156 + Gm22981 snoRNA snoRNA MGP_NODShiLtJ_T0035430.1 MGP_NODShiLtJ_G0019871.1 mouse_genomes_project 12 112030723 112133504 + MGP_NODShiLtJ_P0035430 Kcnk13 protein_coding protein_coding MGP_NODShiLtJ_T0035431.1 MGP_NODShiLtJ_G0019871.1 mouse_genomes_project 12 112030723 112133504 + MGP_NODShiLtJ_P0035431 Kcnk13 protein_coding protein_coding MGP_NODShiLtJ_T0035432.1 MGP_NODShiLtJ_G0019871.1 mouse_genomes_project 12 112030729 112032505 + MGP_NODShiLtJ_P0035432 Kcnk13 protein_coding protein_coding MGP_NODShiLtJ_T0035433.1 MGP_NODShiLtJ_G0019871.1 mouse_genomes_project 12 112030749 112133496 + MGP_NODShiLtJ_P0035433 Kcnk13 protein_coding protein_coding MGP_NODShiLtJ_T0009785.1 MGP_NODShiLtJ_G0007918.1 mouse_genomes_project 12 123079084 123079199 - Gm44322 miRNA miRNA MGP_NODShiLtJ_T0012701.1 MGP_NODShiLtJ_G0010809.1 mouse_genomes_project 12 82209624 82209930 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034322.1 MGP_NODShiLtJ_G0019491.1 mouse_genomes_project 12 23671432 23677556 + MGP_NODShiLtJ_P0034322 protein_coding protein_coding MGP_NODShiLtJ_T0034323.1 MGP_NODShiLtJ_G0019491.1 mouse_genomes_project 12 23671747 23672771 + protein_coding retained_intron MGP_NODShiLtJ_T0034324.1 MGP_NODShiLtJ_G0019491.1 mouse_genomes_project 12 23671943 23674945 + MGP_NODShiLtJ_P0034324 protein_coding protein_coding MGP_NODShiLtJ_T0034325.1 MGP_NODShiLtJ_G0019491.1 mouse_genomes_project 12 23672220 23676750 + MGP_NODShiLtJ_P0034325 protein_coding protein_coding MGP_NODShiLtJ_T0034836.1 MGP_NODShiLtJ_G0019686.1 mouse_genomes_project 12 81092372 81097368 + MGP_NODShiLtJ_P0034836 Six6 protein_coding protein_coding MGP_NODShiLtJ_T0035225.1 MGP_NODShiLtJ_G0019815.1 mouse_genomes_project 12 94985432 94988822 + MGP_NODShiLtJ_P0035225 Fos protein_coding protein_coding MGP_NODShiLtJ_T0035226.1 MGP_NODShiLtJ_G0019815.1 mouse_genomes_project 12 94986233 94987734 + Fos protein_coding processed_transcript MGP_NODShiLtJ_T0035227.1 MGP_NODShiLtJ_G0019815.1 mouse_genomes_project 12 94986233 94987556 + Fos protein_coding processed_transcript MGP_NODShiLtJ_T0035228.1 MGP_NODShiLtJ_G0019815.1 mouse_genomes_project 12 94986453 94987612 + Fos protein_coding processed_transcript MGP_NODShiLtJ_T0035567.1 MGP_NODShiLtJ_G0019916.1 mouse_genomes_project 12 116576182 116593408 - MGP_NODShiLtJ_P0035567 Serpina12 protein_coding protein_coding MGP_NODShiLtJ_T0011228.1 MGP_NODShiLtJ_G0009361.1 mouse_genomes_project 12 122863634 122863839 + Gm27528 misc_RNA misc_RNA MGP_NODShiLtJ_T0009798.1 MGP_NODShiLtJ_G0007931.1 mouse_genomes_project 12 123095155 123095234 + Mir409 miRNA miRNA MGP_NODShiLtJ_T0035847.1 MGP_NODShiLtJ_G0020018.1 mouse_genomes_project 12 126686332 126689130 + MGP_NODShiLtJ_P0035847 9230104M06Rik protein_coding protein_coding MGP_NODShiLtJ_T0099999.1 MGP_NODShiLtJ_G0038393.1 mouse_genomes_project 12 71482023 71482154 + Gm24066 snoRNA snoRNA MGP_NODShiLtJ_T0034612.1 MGP_NODShiLtJ_G0019605.1 mouse_genomes_project 12 59794055 59795713 + MGP_NODShiLtJ_P0034612 Aldoart2 protein_coding protein_coding MGP_NODShiLtJ_T0097915.1 MGP_NODShiLtJ_G0036327.1 mouse_genomes_project 12 74950522 74950641 - n-R5s60 rRNA rRNA MGP_NODShiLtJ_T0011224.1 MGP_NODShiLtJ_G0009357.1 mouse_genomes_project 12 96424410 96424712 + Gm25888 misc_RNA misc_RNA MGP_NODShiLtJ_T0009783.1 MGP_NODShiLtJ_G0007916.1 mouse_genomes_project 12 123077798 123077873 + Mir381 miRNA miRNA MGP_NODShiLtJ_T0100037.1 MGP_NODShiLtJ_G0038431.1 mouse_genomes_project 12 123036125 123036197 + Gm25854 snoRNA snoRNA MGP_NODShiLtJ_T0035112.1 MGP_NODShiLtJ_G0019780.1 mouse_genomes_project 12 93485377 93493408 + MGP_NODShiLtJ_P0035112 Acot5 protein_coding protein_coding MGP_NODShiLtJ_T0035113.1 MGP_NODShiLtJ_G0019780.1 mouse_genomes_project 12 93485377 93493409 + MGP_NODShiLtJ_P0035113 Acot5 protein_coding protein_coding MGP_NODShiLtJ_T0034899.1 MGP_NODShiLtJ_G0019709.1 mouse_genomes_project 12 84776107 84843334 + MGP_NODShiLtJ_P0034899 Mthfd1 protein_coding protein_coding MGP_NODShiLtJ_T0034456.1 MGP_NODShiLtJ_G0019541.1 mouse_genomes_project 12 34983243 35074783 + MGP_NODShiLtJ_P0034456 Snx13 protein_coding protein_coding MGP_NODShiLtJ_T0034457.1 MGP_NODShiLtJ_G0019541.1 mouse_genomes_project 12 34983440 35088238 + MGP_NODShiLtJ_P0034457 Snx13 protein_coding protein_coding MGP_NODShiLtJ_T0035886.1 MGP_NODShiLtJ_G0020027.1 mouse_genomes_project 12 130865851 130928331 + Vipr2 protein_coding retained_intron MGP_NODShiLtJ_T0035887.1 MGP_NODShiLtJ_G0020027.1 mouse_genomes_project 12 130865853 130934618 + MGP_NODShiLtJ_P0035887 Vipr2 protein_coding protein_coding MGP_NODShiLtJ_T0035888.1 MGP_NODShiLtJ_G0020027.1 mouse_genomes_project 12 130865885 130887026 + Vipr2 protein_coding processed_transcript MGP_NODShiLtJ_T0035889.1 MGP_NODShiLtJ_G0020027.1 mouse_genomes_project 12 130865891 130882876 + Vipr2 protein_coding processed_transcript MGP_NODShiLtJ_T0035890.1 MGP_NODShiLtJ_G0020027.1 mouse_genomes_project 12 130865898 130921746 + Vipr2 protein_coding processed_transcript MGP_NODShiLtJ_T0035891.1 MGP_NODShiLtJ_G0020027.1 mouse_genomes_project 12 130925705 130932100 + MGP_NODShiLtJ_P0035891 Vipr2 protein_coding protein_coding MGP_NODShiLtJ_T0006342.1 MGP_NODShiLtJ_G0005283.1 mouse_genomes_project 12 32548247 32584157 - 4933406C10Rik lincRNA lincRNA MGP_NODShiLtJ_T0006343.1 MGP_NODShiLtJ_G0005283.1 mouse_genomes_project 12 32553820 32584151 - 4933406C10Rik lincRNA lincRNA MGP_NODShiLtJ_T0035259.1 MGP_NODShiLtJ_G0019822.1 mouse_genomes_project 12 95628895 95716875 + MGP_NODShiLtJ_P0035259 Ift43 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035260.1 MGP_NODShiLtJ_G0019822.1 mouse_genomes_project 12 95628902 95716868 + MGP_NODShiLtJ_P0035260 Ift43 protein_coding protein_coding MGP_NODShiLtJ_T0100010.1 MGP_NODShiLtJ_G0038404.1 mouse_genomes_project 12 97131968 97132104 - Mir3068 snoRNA snoRNA MGP_NODShiLtJ_T0099998.1 MGP_NODShiLtJ_G0038392.1 mouse_genomes_project 12 64451648 64451779 + Gm22673 snoRNA snoRNA MGP_NODShiLtJ_T0034255.1 MGP_NODShiLtJ_G0019471.1 mouse_genomes_project 12 15463890 15568125 + MGP_NODShiLtJ_P0034255 Rock2 protein_coding protein_coding MGP_NODShiLtJ_T0000102.1 MGP_NODShiLtJ_G0000077.1 mouse_genomes_project 12 128558658 128559115 - MGP_NODShiLtJ_P0000102 Ighv6-6 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0006408.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122874291 122878746 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006409.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122874295 122909652 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006410.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122874297 122897108 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006411.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122875312 122899597 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006412.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122875555 122877733 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006413.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122877924 122896240 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006414.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122880392 122909657 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006415.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122881376 122909650 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006416.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122881430 122909653 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006417.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122887134 122896723 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0006418.1 MGP_NODShiLtJ_G0005336.1 mouse_genomes_project 12 122887232 122887753 + Meg3 lincRNA lincRNA MGP_NODShiLtJ_T0035848.1 MGP_NODShiLtJ_G0020019.1 mouse_genomes_project 12 126702535 126768676 + MGP_NODShiLtJ_P0035848 Pacs2 protein_coding protein_coding MGP_NODShiLtJ_T0006388.1 MGP_NODShiLtJ_G0005321.1 mouse_genomes_project 12 118277653 118327388 + lincRNA lincRNA MGP_NODShiLtJ_T0006389.1 MGP_NODShiLtJ_G0005321.1 mouse_genomes_project 12 118278052 118327386 + lincRNA lincRNA MGP_NODShiLtJ_T0035815.1 MGP_NODShiLtJ_G0020003.1 mouse_genomes_project 12 126232024 126258455 + MGP_NODShiLtJ_P0035815 Inf2 protein_coding protein_coding MGP_NODShiLtJ_T0009758.1 MGP_NODShiLtJ_G0007891.1 mouse_genomes_project 12 122962950 122963029 + Mir370 miRNA miRNA MGP_NODShiLtJ_T0009779.1 MGP_NODShiLtJ_G0007912.1 mouse_genomes_project 12 123074427 123074509 + Mir376b miRNA miRNA MGP_NODShiLtJ_T0035303.1 MGP_NODShiLtJ_G0019837.1 mouse_genomes_project 12 96915184 96942607 - MGP_NODShiLtJ_P0035303 Vipas39 protein_coding protein_coding MGP_NODShiLtJ_T0035304.1 MGP_NODShiLtJ_G0019837.1 mouse_genomes_project 12 96915184 96940570 - MGP_NODShiLtJ_P0035304 Vipas39 protein_coding protein_coding MGP_NODShiLtJ_T0035305.1 MGP_NODShiLtJ_G0019837.1 mouse_genomes_project 12 96915184 96942607 - MGP_NODShiLtJ_P0035305 Vipas39 protein_coding protein_coding MGP_NODShiLtJ_T0011220.1 MGP_NODShiLtJ_G0009353.1 mouse_genomes_project 12 78914474 78914784 + Gm24857 misc_RNA misc_RNA MGP_NODShiLtJ_T0101592.1 MGP_NODShiLtJ_G0039761.1 mouse_genomes_project 12 116793883 116801368 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006350.1 MGP_NODShiLtJ_G0005289.1 mouse_genomes_project 12 56503267 56505613 - 1700031P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0006351.1 MGP_NODShiLtJ_G0005289.1 mouse_genomes_project 12 56504877 56505609 - 1700031P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0006352.1 MGP_NODShiLtJ_G0005289.1 mouse_genomes_project 12 56504895 56505610 - 1700031P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0034475.1 MGP_NODShiLtJ_G0019551.1 mouse_genomes_project 12 36433542 36434482 - MGP_NODShiLtJ_P0034475 D630036H23Rik protein_coding protein_coding MGP_NODShiLtJ_T0003354.1 MGP_NODShiLtJ_G0003076.1 mouse_genomes_project 12 89707367 89713381 - Plekhd1os antisense antisense MGP_NODShiLtJ_T0035175.1 MGP_NODShiLtJ_G0019799.1 mouse_genomes_project 12 94253354 94255174 + MGP_NODShiLtJ_P0035175 Isca2 protein_coding protein_coding MGP_NODShiLtJ_T0003373.1 MGP_NODShiLtJ_G0003093.1 mouse_genomes_project 12 124097319 124097836 - Gm17111 antisense antisense MGP_NODShiLtJ_T0098742.1 MGP_NODShiLtJ_G0037136.1 mouse_genomes_project 12 7586005 7586109 - Gm22845 snRNA snRNA MGP_NODShiLtJ_T0011211.1 MGP_NODShiLtJ_G0009344.1 mouse_genomes_project 12 16340538 16340883 - Gm25925 misc_RNA misc_RNA MGP_NODShiLtJ_T0009808.1 MGP_NODShiLtJ_G0007941.1 mouse_genomes_project 12 125735172 125735248 + Mir203 miRNA miRNA MGP_NODShiLtJ_T0035555.1 MGP_NODShiLtJ_G0019912.1 mouse_genomes_project 12 116128097 116135421 - MGP_NODShiLtJ_P0035555 Serpina16 protein_coding protein_coding MGP_NODShiLtJ_T0035556.1 MGP_NODShiLtJ_G0019912.1 mouse_genomes_project 12 116128185 116134746 - MGP_NODShiLtJ_P0035556 Serpina16 protein_coding protein_coding MGP_NODShiLtJ_T0009800.1 MGP_NODShiLtJ_G0007933.1 mouse_genomes_project 12 123095286 123095366 + Mir412 miRNA miRNA MGP_NODShiLtJ_T0035843.1 MGP_NODShiLtJ_G0020015.1 mouse_genomes_project 12 126621858 126629709 - MGP_NODShiLtJ_P0035843 Nudt14 protein_coding protein_coding MGP_NODShiLtJ_T0000846.1 MGP_NODShiLtJ_G0000776.1 mouse_genomes_project 12 99144867 99146777 - TEC TEC MGP_NODShiLtJ_T0009817.1 MGP_NODShiLtJ_G0007950.1 mouse_genomes_project 12 132107387 132107456 + Mir153 miRNA miRNA MGP_NODShiLtJ_T0101277.1 MGP_NODShiLtJ_G0039552.1 mouse_genomes_project 12 116970503 116987833 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101278.1 MGP_NODShiLtJ_G0039552.1 mouse_genomes_project 12 116972751 116991961 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0098772.1 MGP_NODShiLtJ_G0037166.1 mouse_genomes_project 12 84952017 84952091 - Gm25563 snRNA snRNA MGP_NODShiLtJ_T0097912.1 MGP_NODShiLtJ_G0036324.1 mouse_genomes_project 12 57004370 57004489 - n-R5s58 rRNA rRNA MGP_NODShiLtJ_T0100011.1 MGP_NODShiLtJ_G0038405.1 mouse_genomes_project 12 100977398 100977527 + Gm23195 snoRNA snoRNA MGP_NODShiLtJ_T0100021.1 MGP_NODShiLtJ_G0038415.1 mouse_genomes_project 12 122989921 122989992 + Gm23600 snoRNA snoRNA MGP_NODShiLtJ_T0034076.1 MGP_NODShiLtJ_G0019412.1 mouse_genomes_project 12 202089 243896 + MGP_NODShiLtJ_P0034076 Kif3c protein_coding protein_coding MGP_NODShiLtJ_T0098767.1 MGP_NODShiLtJ_G0037161.1 mouse_genomes_project 12 75097095 75097281 + Gm26256 snRNA snRNA MGP_NODShiLtJ_T0006440.1 MGP_NODShiLtJ_G0005346.1 mouse_genomes_project 12 126633953 126638103 - Gm26583 lincRNA lincRNA MGP_NODShiLtJ_T0034939.1 MGP_NODShiLtJ_G0019723.1 mouse_genomes_project 12 85813109 86096017 + MGP_NODShiLtJ_P0034939 Fut8 protein_coding protein_coding MGP_NODShiLtJ_T0034940.1 MGP_NODShiLtJ_G0019723.1 mouse_genomes_project 12 85814070 86096359 + MGP_NODShiLtJ_P0034940 Fut8 protein_coding protein_coding MGP_NODShiLtJ_T0009739.1 MGP_NODShiLtJ_G0007872.1 mouse_genomes_project 12 122901613 122901707 + Mir770 miRNA miRNA MGP_NODShiLtJ_T0034424.1 MGP_NODShiLtJ_G0019529.1 mouse_genomes_project 12 31966966 31974643 + MGP_NODShiLtJ_P0034424 Ccdc71l protein_coding protein_coding MGP_NODShiLtJ_T0035038.1 MGP_NODShiLtJ_G0019764.1 mouse_genomes_project 12 91766425 91767544 - MGP_NODShiLtJ_P0035038 Gm5435 protein_coding protein_coding MGP_NODShiLtJ_T0035337.1 MGP_NODShiLtJ_G0019849.1 mouse_genomes_project 12 98116515 98117548 + MGP_NODShiLtJ_P0035337 Gm5145 protein_coding protein_coding MGP_NODShiLtJ_T0035184.1 MGP_NODShiLtJ_G0019802.1 mouse_genomes_project 12 94406097 94460653 - MGP_NODShiLtJ_P0035184 Arel1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035185.1 MGP_NODShiLtJ_G0019802.1 mouse_genomes_project 12 94406099 94460729 - MGP_NODShiLtJ_P0035185 Arel1 protein_coding protein_coding MGP_NODShiLtJ_T0035186.1 MGP_NODShiLtJ_G0019802.1 mouse_genomes_project 12 94423460 94433245 - MGP_NODShiLtJ_P0035186 Arel1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035187.1 MGP_NODShiLtJ_G0019802.1 mouse_genomes_project 12 94430147 94436790 - MGP_NODShiLtJ_P0035187 Arel1 protein_coding protein_coding MGP_NODShiLtJ_T0035188.1 MGP_NODShiLtJ_G0019802.1 mouse_genomes_project 12 94431747 94435265 - MGP_NODShiLtJ_P0035188 Arel1 protein_coding protein_coding MGP_NODShiLtJ_T0035189.1 MGP_NODShiLtJ_G0019802.1 mouse_genomes_project 12 94431768 94460685 - MGP_NODShiLtJ_P0035189 Arel1 protein_coding protein_coding MGP_NODShiLtJ_T0035190.1 MGP_NODShiLtJ_G0019802.1 mouse_genomes_project 12 94431777 94460667 - MGP_NODShiLtJ_P0035190 Arel1 protein_coding protein_coding MGP_NODShiLtJ_T0035191.1 MGP_NODShiLtJ_G0019802.1 mouse_genomes_project 12 94440948 94455897 - Arel1 protein_coding processed_transcript MGP_NODShiLtJ_T0012744.1 MGP_NODShiLtJ_G0010852.1 mouse_genomes_project 12 130291181 130292164 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035671.1 MGP_NODShiLtJ_G0019960.1 mouse_genomes_project 12 122139404 122173483 - MGP_NODShiLtJ_P0035671 Wars protein_coding protein_coding MGP_NODShiLtJ_T0035672.1 MGP_NODShiLtJ_G0019960.1 mouse_genomes_project 12 122139404 122174448 - MGP_NODShiLtJ_P0035672 Wars protein_coding protein_coding MGP_NODShiLtJ_T0035673.1 MGP_NODShiLtJ_G0019960.1 mouse_genomes_project 12 122139404 122174411 - MGP_NODShiLtJ_P0035673 Wars protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035674.1 MGP_NODShiLtJ_G0019960.1 mouse_genomes_project 12 122139408 122173482 - MGP_NODShiLtJ_P0035674 Wars protein_coding protein_coding MGP_NODShiLtJ_T0035675.1 MGP_NODShiLtJ_G0019960.1 mouse_genomes_project 12 122145459 122155510 - Wars protein_coding retained_intron MGP_NODShiLtJ_T0035676.1 MGP_NODShiLtJ_G0019960.1 mouse_genomes_project 12 122155342 122174375 - MGP_NODShiLtJ_P0035676 Wars protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035677.1 MGP_NODShiLtJ_G0019960.1 mouse_genomes_project 12 122161005 122168700 - Wars protein_coding retained_intron MGP_NODShiLtJ_T0034458.1 MGP_NODShiLtJ_G0019542.1 mouse_genomes_project 12 35467602 35515249 - MGP_NODShiLtJ_P0034458 Ahr protein_coding protein_coding MGP_NODShiLtJ_T0034459.1 MGP_NODShiLtJ_G0019542.1 mouse_genomes_project 12 35478289 35514832 - MGP_NODShiLtJ_P0034459 Ahr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034460.1 MGP_NODShiLtJ_G0019542.1 mouse_genomes_project 12 35487799 35498742 - Ahr protein_coding retained_intron MGP_NODShiLtJ_T0099981.1 MGP_NODShiLtJ_G0038375.1 mouse_genomes_project 12 30499916 30500049 + Gm25408 snoRNA snoRNA MGP_NODShiLtJ_T0098764.1 MGP_NODShiLtJ_G0037158.1 mouse_genomes_project 12 67537182 67537286 + Gm24750 snRNA snRNA MGP_NODShiLtJ_T0034813.1 MGP_NODShiLtJ_G0019679.1 mouse_genomes_project 12 80248923 80273882 - Rtn1 protein_coding processed_transcript MGP_NODShiLtJ_T0034814.1 MGP_NODShiLtJ_G0019679.1 mouse_genomes_project 12 80248923 80469220 - MGP_NODShiLtJ_P0034814 Rtn1 protein_coding protein_coding MGP_NODShiLtJ_T0034815.1 MGP_NODShiLtJ_G0019679.1 mouse_genomes_project 12 80248924 80274866 - MGP_NODShiLtJ_P0034815 Rtn1 protein_coding protein_coding MGP_NODShiLtJ_T0034816.1 MGP_NODShiLtJ_G0019679.1 mouse_genomes_project 12 80250453 80274866 - MGP_NODShiLtJ_P0034816 Rtn1 protein_coding protein_coding MGP_NODShiLtJ_T0034817.1 MGP_NODShiLtJ_G0019679.1 mouse_genomes_project 12 80261386 80274828 - Rtn1 protein_coding processed_transcript MGP_NODShiLtJ_T0035614.1 MGP_NODShiLtJ_G0019944.1 mouse_genomes_project 12 118702432 118794202 + MGP_NODShiLtJ_P0035614 Ak7 protein_coding protein_coding MGP_NODShiLtJ_T0000070.1 MGP_NODShiLtJ_G0000055.1 mouse_genomes_project 12 127810455 127810901 - MGP_NODShiLtJ_P0000070 Ighv2-9 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0006399.1 MGP_NODShiLtJ_G0005328.1 mouse_genomes_project 12 120209983 120233774 - Gm16086 lincRNA lincRNA MGP_NODShiLtJ_T0035434.1 MGP_NODShiLtJ_G0019872.1 mouse_genomes_project 12 112190750 112204647 + MGP_NODShiLtJ_P0035434 Psmc1 protein_coding protein_coding MGP_NODShiLtJ_T0035500.1 MGP_NODShiLtJ_G0019895.1 mouse_genomes_project 12 115109927 115116550 - MGP_NODShiLtJ_P0035500 AK010878 protein_coding protein_coding MGP_NODShiLtJ_T0035501.1 MGP_NODShiLtJ_G0019895.1 mouse_genomes_project 12 115115030 115116553 - MGP_NODShiLtJ_P0035501 AK010878 protein_coding protein_coding MGP_NODShiLtJ_T0034544.1 MGP_NODShiLtJ_G0019572.1 mouse_genomes_project 12 52694224 52696996 + Foxg1 protein_coding processed_transcript MGP_NODShiLtJ_T0034545.1 MGP_NODShiLtJ_G0019572.1 mouse_genomes_project 12 52694364 52695164 + Foxg1 protein_coding processed_transcript MGP_NODShiLtJ_T0034546.1 MGP_NODShiLtJ_G0019572.1 mouse_genomes_project 12 52694447 52699487 + MGP_NODShiLtJ_P0034546 Foxg1 protein_coding protein_coding MGP_NODShiLtJ_T0034547.1 MGP_NODShiLtJ_G0019572.1 mouse_genomes_project 12 52694570 52699493 + MGP_NODShiLtJ_P0034547 Foxg1 protein_coding protein_coding MGP_NODShiLtJ_T0009795.1 MGP_NODShiLtJ_G0007928.1 mouse_genomes_project 12 123091117 123091196 + Mir496a miRNA miRNA MGP_NODShiLtJ_T0035103.1 MGP_NODShiLtJ_G0019773.1 mouse_genomes_project 12 93352383 93354729 + MGP_NODShiLtJ_P0035103 2410016O06Rik protein_coding protein_coding MGP_NODShiLtJ_T0000058.1 MGP_NODShiLtJ_G0000046.1 mouse_genomes_project 12 127405132 127405664 - MGP_NODShiLtJ_P0000058 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034229.1 MGP_NODShiLtJ_G0019461.1 mouse_genomes_project 12 11016098 11021920 - MGP_NODShiLtJ_P0034229 Mycn protein_coding protein_coding MGP_NODShiLtJ_T0034230.1 MGP_NODShiLtJ_G0019461.1 mouse_genomes_project 12 11016098 11020622 - MGP_NODShiLtJ_P0034230 Mycn protein_coding protein_coding MGP_NODShiLtJ_T0034231.1 MGP_NODShiLtJ_G0019461.1 mouse_genomes_project 12 11020949 11021831 - Mycn protein_coding processed_transcript MGP_NODShiLtJ_T0035573.1 MGP_NODShiLtJ_G0019919.1 mouse_genomes_project 12 116738681 116750084 - MGP_NODShiLtJ_P0035573 Serpina3c protein_coding protein_coding MGP_NODShiLtJ_T0012719.1 MGP_NODShiLtJ_G0010827.1 mouse_genomes_project 12 107421653 107422007 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009708.1 MGP_NODShiLtJ_G0007841.1 mouse_genomes_project 12 76992265 76992344 + miRNA miRNA MGP_NODShiLtJ_T0035262.1 MGP_NODShiLtJ_G0019824.1 mouse_genomes_project 12 95934371 96110019 + MGP_NODShiLtJ_P0035262 Esrrb protein_coding protein_coding MGP_NODShiLtJ_T0035263.1 MGP_NODShiLtJ_G0019824.1 mouse_genomes_project 12 95996129 96110016 + MGP_NODShiLtJ_P0035263 Esrrb protein_coding protein_coding MGP_NODShiLtJ_T0035264.1 MGP_NODShiLtJ_G0019824.1 mouse_genomes_project 12 95996129 96104158 + MGP_NODShiLtJ_P0035264 Esrrb protein_coding protein_coding MGP_NODShiLtJ_T0035265.1 MGP_NODShiLtJ_G0019824.1 mouse_genomes_project 12 95996368 96108197 + MGP_NODShiLtJ_P0035265 Esrrb protein_coding protein_coding MGP_NODShiLtJ_T0035266.1 MGP_NODShiLtJ_G0019824.1 mouse_genomes_project 12 96050399 96107462 + MGP_NODShiLtJ_P0035266 Esrrb protein_coding protein_coding MGP_NODShiLtJ_T0035267.1 MGP_NODShiLtJ_G0019824.1 mouse_genomes_project 12 96093026 96098578 + Esrrb protein_coding processed_transcript MGP_NODShiLtJ_T0012675.1 MGP_NODShiLtJ_G0010783.1 mouse_genomes_project 12 2672168 2675314 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034564.1 MGP_NODShiLtJ_G0019582.1 mouse_genomes_project 12 55684259 55786902 - MGP_NODShiLtJ_P0034564 Heatr5a protein_coding protein_coding MGP_NODShiLtJ_T0034284.1 MGP_NODShiLtJ_G0019480.1 mouse_genomes_project 12 19971282 20075712 + MGP_NODShiLtJ_P0034284 Asap2 protein_coding protein_coding MGP_NODShiLtJ_T0034285.1 MGP_NODShiLtJ_G0019480.1 mouse_genomes_project 12 19971282 20075712 + MGP_NODShiLtJ_P0034285 Asap2 protein_coding protein_coding MGP_NODShiLtJ_T0034286.1 MGP_NODShiLtJ_G0019480.1 mouse_genomes_project 12 19971282 20075712 + MGP_NODShiLtJ_P0034286 Asap2 protein_coding protein_coding MGP_NODShiLtJ_T0034287.1 MGP_NODShiLtJ_G0019480.1 mouse_genomes_project 12 19971282 20073752 + MGP_NODShiLtJ_P0034287 Asap2 protein_coding protein_coding MGP_NODShiLtJ_T0035831.1 MGP_NODShiLtJ_G0020008.1 mouse_genomes_project 12 126374710 126399378 + MGP_NODShiLtJ_P0035831 Cep170b protein_coding protein_coding MGP_NODShiLtJ_T0035832.1 MGP_NODShiLtJ_G0020008.1 mouse_genomes_project 12 126374730 126402054 + MGP_NODShiLtJ_P0035832 Cep170b protein_coding protein_coding MGP_NODShiLtJ_T0035833.1 MGP_NODShiLtJ_G0020008.1 mouse_genomes_project 12 126374730 126402054 + MGP_NODShiLtJ_P0035833 Cep170b protein_coding protein_coding MGP_NODShiLtJ_T0034976.1 MGP_NODShiLtJ_G0019744.1 mouse_genomes_project 12 89652029 89663907 - MGP_NODShiLtJ_P0034976 protein_coding protein_coding MGP_NODShiLtJ_T0034977.1 MGP_NODShiLtJ_G0019744.1 mouse_genomes_project 12 89653165 89663398 - MGP_NODShiLtJ_P0034977 protein_coding protein_coding MGP_NODShiLtJ_T0034129.1 MGP_NODShiLtJ_G0019419.1 mouse_genomes_project 12 1018277 1048651 + MGP_NODShiLtJ_P0034129 Dnajc27 protein_coding protein_coding MGP_NODShiLtJ_T0034130.1 MGP_NODShiLtJ_G0019419.1 mouse_genomes_project 12 1018332 1044916 + MGP_NODShiLtJ_P0034130 Dnajc27 protein_coding protein_coding MGP_NODShiLtJ_T0035527.1 MGP_NODShiLtJ_G0019903.1 mouse_genomes_project 12 115814427 115834296 + MGP_NODShiLtJ_P0035527 Otub2 protein_coding protein_coding MGP_NODShiLtJ_T0035528.1 MGP_NODShiLtJ_G0019903.1 mouse_genomes_project 12 115814443 115834302 + MGP_NODShiLtJ_P0035528 Otub2 protein_coding protein_coding MGP_NODShiLtJ_T0035529.1 MGP_NODShiLtJ_G0019903.1 mouse_genomes_project 12 115814511 115834302 + Otub2 protein_coding retained_intron MGP_NODShiLtJ_T0035530.1 MGP_NODShiLtJ_G0019903.1 mouse_genomes_project 12 115814730 115830858 + MGP_NODShiLtJ_P0035530 Otub2 protein_coding protein_coding MGP_NODShiLtJ_T0035531.1 MGP_NODShiLtJ_G0019903.1 mouse_genomes_project 12 115818395 115834307 + MGP_NODShiLtJ_P0035531 Otub2 protein_coding protein_coding MGP_NODShiLtJ_T0035478.1 MGP_NODShiLtJ_G0019886.1 mouse_genomes_project 12 114598690 114715803 + MGP_NODShiLtJ_P0035478 Rin3 protein_coding protein_coding MGP_NODShiLtJ_T0035479.1 MGP_NODShiLtJ_G0019886.1 mouse_genomes_project 12 114598809 114677608 + MGP_NODShiLtJ_P0035479 Rin3 protein_coding protein_coding MGP_NODShiLtJ_T0035480.1 MGP_NODShiLtJ_G0019886.1 mouse_genomes_project 12 114598810 114641755 + MGP_NODShiLtJ_P0035480 Rin3 protein_coding protein_coding MGP_NODShiLtJ_T0035481.1 MGP_NODShiLtJ_G0019886.1 mouse_genomes_project 12 114599293 114715804 + MGP_NODShiLtJ_P0035481 Rin3 protein_coding protein_coding MGP_NODShiLtJ_T0035482.1 MGP_NODShiLtJ_G0019886.1 mouse_genomes_project 12 114669246 114676029 + Rin3 protein_coding processed_transcript MGP_NODShiLtJ_T0035483.1 MGP_NODShiLtJ_G0019886.1 mouse_genomes_project 12 114669246 114692710 + Rin3 protein_coding processed_transcript MGP_NODShiLtJ_T0035484.1 MGP_NODShiLtJ_G0019886.1 mouse_genomes_project 12 114669281 114673753 + Rin3 protein_coding retained_intron MGP_NODShiLtJ_T0000337.1 MGP_NODShiLtJ_G0000275.1 mouse_genomes_project 12 64004619 64004688 + mt-Ti Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0034288.1 MGP_NODShiLtJ_G0019481.1 mouse_genomes_project 12 20075346 20095891 - MGP_NODShiLtJ_P0034288 Itgb1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0034289.1 MGP_NODShiLtJ_G0019481.1 mouse_genomes_project 12 20075633 20095751 - MGP_NODShiLtJ_P0034289 Itgb1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0034290.1 MGP_NODShiLtJ_G0019481.1 mouse_genomes_project 12 20076244 20077666 - MGP_NODShiLtJ_P0034290 Itgb1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0034291.1 MGP_NODShiLtJ_G0019481.1 mouse_genomes_project 12 20076830 20095839 - MGP_NODShiLtJ_P0034291 Itgb1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0034292.1 MGP_NODShiLtJ_G0019481.1 mouse_genomes_project 12 20076968 20078313 - Itgb1bp1 protein_coding retained_intron MGP_NODShiLtJ_T0034732.1 MGP_NODShiLtJ_G0019653.1 mouse_genomes_project 12 77456357 77459554 - Sos2 protein_coding retained_intron MGP_NODShiLtJ_T0034733.1 MGP_NODShiLtJ_G0019653.1 mouse_genomes_project 12 77456361 77564297 - MGP_NODShiLtJ_P0034733 Sos2 protein_coding protein_coding MGP_NODShiLtJ_T0034734.1 MGP_NODShiLtJ_G0019653.1 mouse_genomes_project 12 77457245 77564286 - MGP_NODShiLtJ_P0034734 Sos2 protein_coding protein_coding MGP_NODShiLtJ_T0034735.1 MGP_NODShiLtJ_G0019653.1 mouse_genomes_project 12 77457481 77564072 - MGP_NODShiLtJ_P0034735 Sos2 protein_coding protein_coding MGP_NODShiLtJ_T0034736.1 MGP_NODShiLtJ_G0019653.1 mouse_genomes_project 12 77457767 77461241 - Sos2 protein_coding retained_intron MGP_NODShiLtJ_T0034737.1 MGP_NODShiLtJ_G0019653.1 mouse_genomes_project 12 77467667 77471003 - Sos2 protein_coding retained_intron MGP_NODShiLtJ_T0034738.1 MGP_NODShiLtJ_G0019653.1 mouse_genomes_project 12 77489470 77492143 - Sos2 protein_coding retained_intron MGP_NODShiLtJ_T0000841.1 MGP_NODShiLtJ_G0000771.1 mouse_genomes_project 12 92258408 92259719 - TEC TEC MGP_NODShiLtJ_T0034685.1 MGP_NODShiLtJ_G0019630.1 mouse_genomes_project 12 71690697 71697365 + MGP_NODShiLtJ_P0034685 Gm527 protein_coding protein_coding MGP_NODShiLtJ_T0000109.1 MGP_NODShiLtJ_G0000083.1 mouse_genomes_project 12 128708231 128708810 - MGP_NODShiLtJ_P0000109 Ighv1-7 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035114.1 MGP_NODShiLtJ_G0019781.1 mouse_genomes_project 12 93523521 93534817 + MGP_NODShiLtJ_P0035114 Acot6 protein_coding protein_coding MGP_NODShiLtJ_T0009732.1 MGP_NODShiLtJ_G0007865.1 mouse_genomes_project 12 118882371 118882441 - Gm22120 miRNA miRNA MGP_NODShiLtJ_T0035820.1 MGP_NODShiLtJ_G0020006.1 mouse_genomes_project 12 126301171 126322830 - MGP_NODShiLtJ_P0035820 Akt1 protein_coding protein_coding MGP_NODShiLtJ_T0035821.1 MGP_NODShiLtJ_G0020006.1 mouse_genomes_project 12 126302023 126320108 - MGP_NODShiLtJ_P0035821 Akt1 protein_coding protein_coding MGP_NODShiLtJ_T0035822.1 MGP_NODShiLtJ_G0020006.1 mouse_genomes_project 12 126303193 126304324 - Akt1 protein_coding retained_intron MGP_NODShiLtJ_T0035823.1 MGP_NODShiLtJ_G0020006.1 mouse_genomes_project 12 126304444 126306988 - Akt1 protein_coding retained_intron MGP_NODShiLtJ_T0035824.1 MGP_NODShiLtJ_G0020006.1 mouse_genomes_project 12 126304912 126306493 - Akt1 protein_coding retained_intron MGP_NODShiLtJ_T0035825.1 MGP_NODShiLtJ_G0020006.1 mouse_genomes_project 12 126305775 126323438 - MGP_NODShiLtJ_P0035825 Akt1 protein_coding protein_coding MGP_NODShiLtJ_T0035826.1 MGP_NODShiLtJ_G0020006.1 mouse_genomes_project 12 126306510 126322498 - MGP_NODShiLtJ_P0035826 Akt1 protein_coding protein_coding MGP_NODShiLtJ_T0035827.1 MGP_NODShiLtJ_G0020006.1 mouse_genomes_project 12 126306616 126316658 - Akt1 protein_coding processed_transcript MGP_NODShiLtJ_T0006340.1 MGP_NODShiLtJ_G0005281.1 mouse_genomes_project 12 30997104 30997782 - Gm29541 lincRNA lincRNA MGP_NODShiLtJ_T0100032.1 MGP_NODShiLtJ_G0038426.1 mouse_genomes_project 12 123029484 123029559 + Gm23736 snoRNA snoRNA MGP_NODShiLtJ_T0012746.1 MGP_NODShiLtJ_G0010854.1 mouse_genomes_project 12 132714552 132714897 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003323.1 MGP_NODShiLtJ_G0003056.1 mouse_genomes_project 12 45909 53629 + Rab10os antisense antisense MGP_NODShiLtJ_T0003324.1 MGP_NODShiLtJ_G0003056.1 mouse_genomes_project 12 45931 69049 + Rab10os antisense antisense MGP_NODShiLtJ_T0003325.1 MGP_NODShiLtJ_G0003056.1 mouse_genomes_project 12 45931 50492 + Rab10os antisense antisense MGP_NODShiLtJ_T0003326.1 MGP_NODShiLtJ_G0003056.1 mouse_genomes_project 12 47399 69048 + Rab10os antisense antisense MGP_NODShiLtJ_T0003327.1 MGP_NODShiLtJ_G0003056.1 mouse_genomes_project 12 47440 51453 + Rab10os antisense antisense MGP_NODShiLtJ_T0003328.1 MGP_NODShiLtJ_G0003056.1 mouse_genomes_project 12 47523 68616 + Rab10os antisense antisense MGP_NODShiLtJ_T0003329.1 MGP_NODShiLtJ_G0003056.1 mouse_genomes_project 12 48220 68671 + Rab10os antisense antisense MGP_NODShiLtJ_T0034407.1 MGP_NODShiLtJ_G0019525.1 mouse_genomes_project 12 31219034 31236368 - MGP_NODShiLtJ_P0034407 Gpr22 protein_coding protein_coding MGP_NODShiLtJ_T0034408.1 MGP_NODShiLtJ_G0019525.1 mouse_genomes_project 12 31231153 31236389 - MGP_NODShiLtJ_P0034408 Gpr22 protein_coding protein_coding MGP_NODShiLtJ_T0034409.1 MGP_NODShiLtJ_G0019525.1 mouse_genomes_project 12 31231890 31236375 - MGP_NODShiLtJ_P0034409 Gpr22 protein_coding protein_coding MGP_NODShiLtJ_T0006421.1 MGP_NODShiLtJ_G0005339.1 mouse_genomes_project 12 123045015 123052487 + B830012L14Rik lincRNA lincRNA MGP_NODShiLtJ_T0012689.1 MGP_NODShiLtJ_G0010797.1 mouse_genomes_project 12 60700430 60700661 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034909.1 MGP_NODShiLtJ_G0019712.1 mouse_genomes_project 12 84899355 84921283 + MGP_NODShiLtJ_P0034909 Zbtb1 protein_coding protein_coding MGP_NODShiLtJ_T0009744.1 MGP_NODShiLtJ_G0007877.1 mouse_genomes_project 12 122927742 122927809 + Mir540 miRNA miRNA MGP_NODShiLtJ_T0012711.1 MGP_NODShiLtJ_G0010819.1 mouse_genomes_project 12 92988956 92989344 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034867.1 MGP_NODShiLtJ_G0019700.1 mouse_genomes_project 12 83298385 83600442 - MGP_NODShiLtJ_P0034867 Kcnh5 protein_coding protein_coding MGP_NODShiLtJ_T0034856.1 MGP_NODShiLtJ_G0019694.1 mouse_genomes_project 12 81795879 82006451 + MGP_NODShiLtJ_P0034856 Prkch protein_coding protein_coding MGP_NODShiLtJ_T0034857.1 MGP_NODShiLtJ_G0019694.1 mouse_genomes_project 12 81795925 81987278 + MGP_NODShiLtJ_P0034857 Prkch protein_coding protein_coding MGP_NODShiLtJ_T0035737.1 MGP_NODShiLtJ_G0019978.1 mouse_genomes_project 12 124671718 124745799 + MGP_NODShiLtJ_P0035737 Traf3 protein_coding protein_coding MGP_NODShiLtJ_T0035738.1 MGP_NODShiLtJ_G0019978.1 mouse_genomes_project 12 124726547 124776490 + MGP_NODShiLtJ_P0035738 Traf3 protein_coding protein_coding MGP_NODShiLtJ_T0035739.1 MGP_NODShiLtJ_G0019978.1 mouse_genomes_project 12 124726547 124776486 + MGP_NODShiLtJ_P0035739 Traf3 protein_coding protein_coding MGP_NODShiLtJ_T0035740.1 MGP_NODShiLtJ_G0019978.1 mouse_genomes_project 12 124744283 124776495 + MGP_NODShiLtJ_P0035740 Traf3 protein_coding protein_coding MGP_NODShiLtJ_T0035741.1 MGP_NODShiLtJ_G0019978.1 mouse_genomes_project 12 124756609 124771902 + Traf3 protein_coding retained_intron MGP_NODShiLtJ_T0012677.1 MGP_NODShiLtJ_G0010785.1 mouse_genomes_project 12 6386311 6389017 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035503.1 MGP_NODShiLtJ_G0019897.1 mouse_genomes_project 12 115145922 115250460 - MGP_NODShiLtJ_P0035503 Btbd7 protein_coding protein_coding MGP_NODShiLtJ_T0035269.1 MGP_NODShiLtJ_G0019826.1 mouse_genomes_project 12 96303348 96330362 - MGP_NODShiLtJ_P0035269 Angel1 protein_coding protein_coding MGP_NODShiLtJ_T0035270.1 MGP_NODShiLtJ_G0019826.1 mouse_genomes_project 12 96305041 96309004 - Angel1 protein_coding processed_transcript MGP_NODShiLtJ_T0035271.1 MGP_NODShiLtJ_G0019826.1 mouse_genomes_project 12 96305159 96320504 - Angel1 protein_coding processed_transcript MGP_NODShiLtJ_T0035272.1 MGP_NODShiLtJ_G0019826.1 mouse_genomes_project 12 96305201 96308799 - Angel1 protein_coding processed_transcript MGP_NODShiLtJ_T0035273.1 MGP_NODShiLtJ_G0019826.1 mouse_genomes_project 12 96305285 96322088 - Angel1 protein_coding processed_transcript MGP_NODShiLtJ_T0035274.1 MGP_NODShiLtJ_G0019826.1 mouse_genomes_project 12 96322247 96325838 - Angel1 protein_coding processed_transcript MGP_NODShiLtJ_T0034862.1 MGP_NODShiLtJ_G0019696.1 mouse_genomes_project 12 82212907 82235579 + MGP_NODShiLtJ_P0034862 Snapc1 protein_coding protein_coding MGP_NODShiLtJ_T0035031.1 MGP_NODShiLtJ_G0019760.1 mouse_genomes_project 12 90767884 90803043 + MGP_NODShiLtJ_P0035031 Ttc9 protein_coding protein_coding MGP_NODShiLtJ_T0003357.1 MGP_NODShiLtJ_G0003079.1 mouse_genomes_project 12 90722133 90723879 + Gm16572 antisense antisense MGP_NODShiLtJ_T0035408.1 MGP_NODShiLtJ_G0019867.1 mouse_genomes_project 12 110912985 110977489 + MGP_NODShiLtJ_P0035408 Ttc8 protein_coding protein_coding MGP_NODShiLtJ_T0035409.1 MGP_NODShiLtJ_G0019867.1 mouse_genomes_project 12 110913023 110977495 + MGP_NODShiLtJ_P0035409 Ttc8 protein_coding protein_coding MGP_NODShiLtJ_T0035410.1 MGP_NODShiLtJ_G0019867.1 mouse_genomes_project 12 110913231 110953237 + MGP_NODShiLtJ_P0035410 Ttc8 protein_coding protein_coding MGP_NODShiLtJ_T0035411.1 MGP_NODShiLtJ_G0019867.1 mouse_genomes_project 12 110933038 110963304 + Ttc8 protein_coding processed_transcript MGP_NODShiLtJ_T0035412.1 MGP_NODShiLtJ_G0019867.1 mouse_genomes_project 12 110966878 110976422 + Ttc8 protein_coding processed_transcript MGP_NODShiLtJ_T0035413.1 MGP_NODShiLtJ_G0019867.1 mouse_genomes_project 12 110966907 110973745 + Ttc8 protein_coding processed_transcript MGP_NODShiLtJ_T0099986.1 MGP_NODShiLtJ_G0038380.1 mouse_genomes_project 12 40396251 40396378 + Gm24069 snoRNA snoRNA MGP_NODShiLtJ_T0034150.1 MGP_NODShiLtJ_G0019426.1 mouse_genomes_project 12 1696680 1697205 - MGP_NODShiLtJ_P0034150 Gm17541 protein_coding protein_coding MGP_NODShiLtJ_T0101581.1 MGP_NODShiLtJ_G0039751.1 mouse_genomes_project 12 84081717 84089121 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101582.1 MGP_NODShiLtJ_G0039751.1 mouse_genomes_project 12 84082374 84089145 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0035296.1 MGP_NODShiLtJ_G0019833.1 mouse_genomes_project 12 96804335 96836791 + MGP_NODShiLtJ_P0035296 Gstz1 protein_coding protein_coding MGP_NODShiLtJ_T0035297.1 MGP_NODShiLtJ_G0019833.1 mouse_genomes_project 12 96829742 96835900 + MGP_NODShiLtJ_P0035297 Gstz1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035496.1 MGP_NODShiLtJ_G0019892.1 mouse_genomes_project 12 115098327 115117422 - MGP_NODShiLtJ_P0035496 Gm20604 protein_coding protein_coding MGP_NODShiLtJ_T0034692.1 MGP_NODShiLtJ_G0019635.1 mouse_genomes_project 12 71885454 71944873 + MGP_NODShiLtJ_P0034692 Fancm protein_coding protein_coding MGP_NODShiLtJ_T0034923.1 MGP_NODShiLtJ_G0019721.1 mouse_genomes_project 12 85352109 85376175 - MGP_NODShiLtJ_P0034923 Rab15 protein_coding protein_coding MGP_NODShiLtJ_T0034924.1 MGP_NODShiLtJ_G0019721.1 mouse_genomes_project 12 85354028 85354989 - Rab15 protein_coding retained_intron MGP_NODShiLtJ_T0034925.1 MGP_NODShiLtJ_G0019721.1 mouse_genomes_project 12 85354276 85359633 - MGP_NODShiLtJ_P0034925 Rab15 protein_coding protein_coding MGP_NODShiLtJ_T0034926.1 MGP_NODShiLtJ_G0019721.1 mouse_genomes_project 12 85354484 85376734 - MGP_NODShiLtJ_P0034926 Rab15 protein_coding protein_coding MGP_NODShiLtJ_T0034927.1 MGP_NODShiLtJ_G0019721.1 mouse_genomes_project 12 85354720 85372954 - MGP_NODShiLtJ_P0034927 Rab15 protein_coding protein_coding MGP_NODShiLtJ_T0034928.1 MGP_NODShiLtJ_G0019721.1 mouse_genomes_project 12 85357034 85376320 - Rab15 protein_coding retained_intron MGP_NODShiLtJ_T0034638.1 MGP_NODShiLtJ_G0019617.1 mouse_genomes_project 12 62058573 62118946 + MGP_NODShiLtJ_P0034638 protein_coding protein_coding MGP_NODShiLtJ_T0034639.1 MGP_NODShiLtJ_G0019617.1 mouse_genomes_project 12 62076875 62284031 + MGP_NODShiLtJ_P0034639 protein_coding protein_coding MGP_NODShiLtJ_T0034640.1 MGP_NODShiLtJ_G0019617.1 mouse_genomes_project 12 62169662 62173737 + MGP_NODShiLtJ_P0034640 protein_coding protein_coding MGP_NODShiLtJ_T0000084.1 MGP_NODShiLtJ_G0000066.1 mouse_genomes_project 12 128314711 128315252 - MGP_NODShiLtJ_P0000084 Ighv7-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000085.1 MGP_NODShiLtJ_G0000066.1 mouse_genomes_project 12 128314711 128315178 - MGP_NODShiLtJ_P0000085 Ighv7-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0099983.1 MGP_NODShiLtJ_G0038377.1 mouse_genomes_project 12 33113058 33113190 - Gm23529 snoRNA snoRNA MGP_NODShiLtJ_T0009703.1 MGP_NODShiLtJ_G0007836.1 mouse_genomes_project 12 46202894 46202955 + Mir5627 miRNA miRNA MGP_NODShiLtJ_T0035853.1 MGP_NODShiLtJ_G0020021.1 mouse_genomes_project 12 126792110 126833202 + MGP_NODShiLtJ_P0035853 Mta1 protein_coding protein_coding MGP_NODShiLtJ_T0035854.1 MGP_NODShiLtJ_G0020021.1 mouse_genomes_project 12 126792110 126833201 + MGP_NODShiLtJ_P0035854 Mta1 protein_coding protein_coding MGP_NODShiLtJ_T0035855.1 MGP_NODShiLtJ_G0020021.1 mouse_genomes_project 12 126792110 126833202 + MGP_NODShiLtJ_P0035855 Mta1 protein_coding protein_coding MGP_NODShiLtJ_T0035856.1 MGP_NODShiLtJ_G0020021.1 mouse_genomes_project 12 126792110 126833202 + MGP_NODShiLtJ_P0035856 Mta1 protein_coding protein_coding MGP_NODShiLtJ_T0035857.1 MGP_NODShiLtJ_G0020021.1 mouse_genomes_project 12 126792155 126833169 + MGP_NODShiLtJ_P0035857 Mta1 protein_coding protein_coding MGP_NODShiLtJ_T0035858.1 MGP_NODShiLtJ_G0020021.1 mouse_genomes_project 12 126793303 126832665 + Mta1 protein_coding processed_transcript MGP_NODShiLtJ_T0035859.1 MGP_NODShiLtJ_G0020021.1 mouse_genomes_project 12 126827327 126829376 + Mta1 protein_coding processed_transcript MGP_NODShiLtJ_T0035860.1 MGP_NODShiLtJ_G0020021.1 mouse_genomes_project 12 126827543 126829334 + Mta1 protein_coding processed_transcript MGP_NODShiLtJ_T0000087.1 MGP_NODShiLtJ_G0000068.1 mouse_genomes_project 12 128357330 128357629 - MGP_NODShiLtJ_P0000087 Ighv3-5 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000088.1 MGP_NODShiLtJ_G0000068.1 mouse_genomes_project 12 128357330 128357766 - MGP_NODShiLtJ_P0000088 Ighv3-5 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0006360.1 MGP_NODShiLtJ_G0005295.1 mouse_genomes_project 12 84933408 84934308 - 4930426I24Rik lincRNA lincRNA MGP_NODShiLtJ_T0035900.1 MGP_NODShiLtJ_G0020032.1 mouse_genomes_project 12 132381770 132633542 + MGP_NODShiLtJ_P0035900 Rapgef5 protein_coding protein_coding MGP_NODShiLtJ_T0035901.1 MGP_NODShiLtJ_G0020032.1 mouse_genomes_project 12 132399099 132636305 + MGP_NODShiLtJ_P0035901 Rapgef5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003350.1 MGP_NODShiLtJ_G0003073.1 mouse_genomes_project 12 78982713 79009678 - 3110056K07Rik antisense antisense MGP_NODShiLtJ_T0003351.1 MGP_NODShiLtJ_G0003073.1 mouse_genomes_project 12 79001934 79009914 - 3110056K07Rik antisense antisense MGP_NODShiLtJ_T0000106.1 MGP_NODShiLtJ_G0000081.1 mouse_genomes_project 12 128680996 128681290 - MGP_NODShiLtJ_P0000106 Ighv1-5 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000107.1 MGP_NODShiLtJ_G0000081.1 mouse_genomes_project 12 128680996 128681474 - MGP_NODShiLtJ_P0000107 Ighv1-5 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0101595.1 MGP_NODShiLtJ_G0039764.1 mouse_genomes_project 12 130620551 130621185 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0034614.1 MGP_NODShiLtJ_G0019607.1 mouse_genomes_project 12 59845722 60094431 - MGP_NODShiLtJ_P0034614 Ralgapa1 protein_coding protein_coding MGP_NODShiLtJ_T0009698.1 MGP_NODShiLtJ_G0007831.1 mouse_genomes_project 12 35147782 35147869 - Mir680-3 miRNA miRNA MGP_NODShiLtJ_T0100040.1 MGP_NODShiLtJ_G0038434.1 mouse_genomes_project 12 125067040 125067167 + Snora28 snoRNA snoRNA MGP_NODShiLtJ_T0035229.1 MGP_NODShiLtJ_G0019816.1 mouse_genomes_project 12 95113087 95157034 + MGP_NODShiLtJ_P0035229 Jdp2 protein_coding protein_coding MGP_NODShiLtJ_T0035230.1 MGP_NODShiLtJ_G0019816.1 mouse_genomes_project 12 95113398 95157033 + MGP_NODShiLtJ_P0035230 Jdp2 protein_coding protein_coding MGP_NODShiLtJ_T0035231.1 MGP_NODShiLtJ_G0019816.1 mouse_genomes_project 12 95114000 95157034 + MGP_NODShiLtJ_P0035231 Jdp2 protein_coding protein_coding MGP_NODShiLtJ_T0034693.1 MGP_NODShiLtJ_G0019636.1 mouse_genomes_project 12 71945548 71988096 - Mis18bp1 protein_coding retained_intron MGP_NODShiLtJ_T0034694.1 MGP_NODShiLtJ_G0019636.1 mouse_genomes_project 12 71945548 71988072 - MGP_NODShiLtJ_P0034694 Mis18bp1 protein_coding protein_coding MGP_NODShiLtJ_T0034695.1 MGP_NODShiLtJ_G0019636.1 mouse_genomes_project 12 71949137 71951533 - Mis18bp1 protein_coding retained_intron MGP_NODShiLtJ_T0034696.1 MGP_NODShiLtJ_G0019636.1 mouse_genomes_project 12 71966677 71968994 - Mis18bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0034697.1 MGP_NODShiLtJ_G0019636.1 mouse_genomes_project 12 71968617 71988058 - Mis18bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0034698.1 MGP_NODShiLtJ_G0019636.1 mouse_genomes_project 12 71969919 71988070 - Mis18bp1 protein_coding retained_intron MGP_NODShiLtJ_T0098750.1 MGP_NODShiLtJ_G0037144.1 mouse_genomes_project 12 52259131 52259238 + Gm26454 snRNA snRNA MGP_NODShiLtJ_T0009780.1 MGP_NODShiLtJ_G0007913.1 mouse_genomes_project 12 123074725 123074845 - Gm25252 miRNA miRNA MGP_NODShiLtJ_T0012743.1 MGP_NODShiLtJ_G0010851.1 mouse_genomes_project 12 130290047 130291196 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000838.1 MGP_NODShiLtJ_G0000768.1 mouse_genomes_project 12 62013940 62018393 + TEC TEC MGP_NODShiLtJ_T0035327.1 MGP_NODShiLtJ_G0019842.1 mouse_genomes_project 12 97138195 97144233 + MGP_NODShiLtJ_P0035327 Slirp protein_coding protein_coding MGP_NODShiLtJ_T0035328.1 MGP_NODShiLtJ_G0019842.1 mouse_genomes_project 12 97138213 97144191 + MGP_NODShiLtJ_P0035328 Slirp protein_coding protein_coding MGP_NODShiLtJ_T0035329.1 MGP_NODShiLtJ_G0019842.1 mouse_genomes_project 12 97138219 97144217 + MGP_NODShiLtJ_P0035329 Slirp protein_coding protein_coding MGP_NODShiLtJ_T0034739.1 MGP_NODShiLtJ_G0019654.1 mouse_genomes_project 12 77572912 77608465 - MGP_NODShiLtJ_P0034739 L2hgdh protein_coding protein_coding MGP_NODShiLtJ_T0003363.1 MGP_NODShiLtJ_G0003085.1 mouse_genomes_project 12 101232255 101259826 + 5430427M07Rik antisense antisense MGP_NODShiLtJ_T0000078.1 MGP_NODShiLtJ_G0000062.1 mouse_genomes_project 12 128086522 128086999 - MGP_NODShiLtJ_P0000078 Ighv14-3 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0012714.1 MGP_NODShiLtJ_G0010822.1 mouse_genomes_project 12 96716577 96716692 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000234.1 MGP_NODShiLtJ_G0000172.1 mouse_genomes_project 12 127372262 127372699 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035553.1 MGP_NODShiLtJ_G0019911.1 mouse_genomes_project 12 116103148 116113762 - MGP_NODShiLtJ_P0035553 Serpina6 protein_coding protein_coding MGP_NODShiLtJ_T0035554.1 MGP_NODShiLtJ_G0019911.1 mouse_genomes_project 12 116110922 116113652 - MGP_NODShiLtJ_P0035554 Serpina6 protein_coding protein_coding MGP_NODShiLtJ_T0009766.1 MGP_NODShiLtJ_G0007899.1 mouse_genomes_project 12 123063375 123063495 + Mir1197 miRNA miRNA MGP_NODShiLtJ_T0035007.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90451287 90612257 - MGP_NODShiLtJ_P0035007 Cox16 protein_coding protein_coding MGP_NODShiLtJ_T0035008.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90451429 90612220 - MGP_NODShiLtJ_P0035008 Cox16 protein_coding protein_coding MGP_NODShiLtJ_T0035012.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90595743 90612267 - MGP_NODShiLtJ_P0035012 Cox16 protein_coding protein_coding MGP_NODShiLtJ_T0035013.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90597132 90611976 - Cox16 protein_coding processed_transcript MGP_NODShiLtJ_T0035014.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90597132 90612260 - MGP_NODShiLtJ_P0035014 Cox16 protein_coding protein_coding MGP_NODShiLtJ_T0035015.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90597134 90611998 - Cox16 protein_coding processed_transcript MGP_NODShiLtJ_T0035016.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90599273 90612274 - Cox16 protein_coding processed_transcript MGP_NODShiLtJ_T0035017.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90599294 90612261 - MGP_NODShiLtJ_P0035017 Cox16 protein_coding protein_coding MGP_NODShiLtJ_T0035021.1 MGP_NODShiLtJ_G0019754.1 mouse_genomes_project 12 90606372 90612232 - Cox16 protein_coding retained_intron MGP_NODShiLtJ_T0034968.1 MGP_NODShiLtJ_G0019739.1 mouse_genomes_project 12 89076035 89082144 - MGP_NODShiLtJ_P0034968 Zfp36l1 protein_coding protein_coding MGP_NODShiLtJ_T0034969.1 MGP_NODShiLtJ_G0019739.1 mouse_genomes_project 12 89076428 89082129 - MGP_NODShiLtJ_P0034969 Zfp36l1 protein_coding protein_coding MGP_NODShiLtJ_T0034167.1 MGP_NODShiLtJ_G0019434.1 mouse_genomes_project 12 1895134 1925570 - MGP_NODShiLtJ_P0034167 Ubxn2a protein_coding protein_coding MGP_NODShiLtJ_T0034168.1 MGP_NODShiLtJ_G0019434.1 mouse_genomes_project 12 1895451 1925129 - MGP_NODShiLtJ_P0034168 Ubxn2a protein_coding protein_coding MGP_NODShiLtJ_T0034169.1 MGP_NODShiLtJ_G0019434.1 mouse_genomes_project 12 1896492 1925304 - MGP_NODShiLtJ_P0034169 Ubxn2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034077.1 MGP_NODShiLtJ_G0019413.1 mouse_genomes_project 12 267871 360722 + MGP_NODShiLtJ_P0034077 Asxl2 protein_coding protein_coding MGP_NODShiLtJ_T0034078.1 MGP_NODShiLtJ_G0019413.1 mouse_genomes_project 12 267898 349940 + MGP_NODShiLtJ_P0034078 Asxl2 protein_coding protein_coding MGP_NODShiLtJ_T0034079.1 MGP_NODShiLtJ_G0019413.1 mouse_genomes_project 12 267915 356881 + MGP_NODShiLtJ_P0034079 Asxl2 protein_coding protein_coding MGP_NODShiLtJ_T0034080.1 MGP_NODShiLtJ_G0019413.1 mouse_genomes_project 12 267926 297801 + Asxl2 protein_coding retained_intron MGP_NODShiLtJ_T0034081.1 MGP_NODShiLtJ_G0019413.1 mouse_genomes_project 12 284634 356787 + MGP_NODShiLtJ_P0034081 Asxl2 protein_coding protein_coding MGP_NODShiLtJ_T0034082.1 MGP_NODShiLtJ_G0019413.1 mouse_genomes_project 12 284639 350065 + MGP_NODShiLtJ_P0034082 Asxl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034083.1 MGP_NODShiLtJ_G0019413.1 mouse_genomes_project 12 347418 359112 + Asxl2 protein_coding processed_transcript MGP_NODShiLtJ_T0034477.1 MGP_NODShiLtJ_G0019553.1 mouse_genomes_project 12 37338735 37444530 + MGP_NODShiLtJ_P0034477 Meox2 protein_coding protein_coding MGP_NODShiLtJ_T0034523.1 MGP_NODShiLtJ_G0019564.1 mouse_genomes_project 12 42162704 43294965 + MGP_NODShiLtJ_P0034523 Immp2l protein_coding protein_coding MGP_NODShiLtJ_T0034524.1 MGP_NODShiLtJ_G0019564.1 mouse_genomes_project 12 42162740 42212724 + Immp2l protein_coding retained_intron MGP_NODShiLtJ_T0034525.1 MGP_NODShiLtJ_G0019564.1 mouse_genomes_project 12 42162741 42269097 + Immp2l protein_coding retained_intron MGP_NODShiLtJ_T0034526.1 MGP_NODShiLtJ_G0019564.1 mouse_genomes_project 12 42162943 43294619 + MGP_NODShiLtJ_P0034526 Immp2l protein_coding protein_coding MGP_NODShiLtJ_T0034527.1 MGP_NODShiLtJ_G0019564.1 mouse_genomes_project 12 42212150 42269083 + MGP_NODShiLtJ_P0034527 Immp2l protein_coding protein_coding MGP_NODShiLtJ_T0035108.1 MGP_NODShiLtJ_G0019778.1 mouse_genomes_project 12 93449978 93457502 + MGP_NODShiLtJ_P0035108 Acot4 protein_coding protein_coding MGP_NODShiLtJ_T0035109.1 MGP_NODShiLtJ_G0019778.1 mouse_genomes_project 12 93450306 93455001 + Acot4 protein_coding retained_intron MGP_NODShiLtJ_T0100015.1 MGP_NODShiLtJ_G0038409.1 mouse_genomes_project 12 117208664 117208792 - Gm24334 snoRNA snoRNA MGP_NODShiLtJ_T0035505.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115324981 115588573 + MGP_NODShiLtJ_P0035505 Unc79 protein_coding protein_coding MGP_NODShiLtJ_T0035506.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115325676 115588185 + MGP_NODShiLtJ_P0035506 Unc79 protein_coding protein_coding MGP_NODShiLtJ_T0035507.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115369850 115588185 + MGP_NODShiLtJ_P0035507 Unc79 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035508.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115382024 115386415 + Unc79 protein_coding retained_intron MGP_NODShiLtJ_T0035509.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115382795 115458045 + MGP_NODShiLtJ_P0035509 Unc79 protein_coding protein_coding MGP_NODShiLtJ_T0035510.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115382846 115588570 + MGP_NODShiLtJ_P0035510 Unc79 protein_coding protein_coding MGP_NODShiLtJ_T0035511.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115382903 115588637 + MGP_NODShiLtJ_P0035511 Unc79 protein_coding protein_coding MGP_NODShiLtJ_T0035512.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115457695 115470006 + Unc79 protein_coding retained_intron MGP_NODShiLtJ_T0035513.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115495778 115511958 + MGP_NODShiLtJ_P0035513 Unc79 protein_coding protein_coding MGP_NODShiLtJ_T0035514.1 MGP_NODShiLtJ_G0019899.1 mouse_genomes_project 12 115536386 115548070 + MGP_NODShiLtJ_P0035514 Unc79 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009702.1 MGP_NODShiLtJ_G0007835.1 mouse_genomes_project 12 41311358 41311458 - Mir1938 miRNA miRNA MGP_NODShiLtJ_T0098766.1 MGP_NODShiLtJ_G0037160.1 mouse_genomes_project 12 72400256 72400359 + Gm25599 snRNA snRNA MGP_NODShiLtJ_T0000008.1 MGP_NODShiLtJ_G0000006.1 mouse_genomes_project 12 127082401 127087685 - MGP_NODShiLtJ_P0000008 Ighg1 IG_C_gene IG_C_gene MGP_NODShiLtJ_T0000009.1 MGP_NODShiLtJ_G0000006.1 mouse_genomes_project 12 127086035 127087685 - MGP_NODShiLtJ_P0000009 Ighg1 IG_C_gene IG_C_gene MGP_NODShiLtJ_T0035389.1 MGP_NODShiLtJ_G0019859.1 mouse_genomes_project 12 107001458 107099860 + MGP_NODShiLtJ_P0035389 Flrt2 protein_coding protein_coding MGP_NODShiLtJ_T0035390.1 MGP_NODShiLtJ_G0019859.1 mouse_genomes_project 12 107004591 107095752 + MGP_NODShiLtJ_P0035390 Flrt2 protein_coding protein_coding MGP_NODShiLtJ_T0034900.1 MGP_NODShiLtJ_G0019710.1 mouse_genomes_project 12 84848407 84858131 + MGP_NODShiLtJ_P0034900 Akap5 protein_coding protein_coding MGP_NODShiLtJ_T0034901.1 MGP_NODShiLtJ_G0019710.1 mouse_genomes_project 12 84848407 84858129 + MGP_NODShiLtJ_P0034901 Akap5 protein_coding protein_coding MGP_NODShiLtJ_T0034902.1 MGP_NODShiLtJ_G0019710.1 mouse_genomes_project 12 84848421 84854032 + MGP_NODShiLtJ_P0034902 Akap5 protein_coding protein_coding MGP_NODShiLtJ_T0035523.1 MGP_NODShiLtJ_G0019902.1 mouse_genomes_project 12 115739408 115776579 - MGP_NODShiLtJ_P0035523 Asb2 protein_coding protein_coding MGP_NODShiLtJ_T0035524.1 MGP_NODShiLtJ_G0019902.1 mouse_genomes_project 12 115739412 115753850 - Asb2 protein_coding retained_intron MGP_NODShiLtJ_T0035525.1 MGP_NODShiLtJ_G0019902.1 mouse_genomes_project 12 115739412 115756639 - MGP_NODShiLtJ_P0035525 Asb2 protein_coding protein_coding MGP_NODShiLtJ_T0035526.1 MGP_NODShiLtJ_G0019902.1 mouse_genomes_project 12 115753134 115755000 - Asb2 protein_coding processed_transcript MGP_NODShiLtJ_T0000238.1 MGP_NODShiLtJ_G0000176.1 mouse_genomes_project 12 127719165 127719477 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034954.1 MGP_NODShiLtJ_G0019734.1 mouse_genomes_project 12 88015851 88032626 - MGP_NODShiLtJ_P0034954 Vti1b protein_coding protein_coding MGP_NODShiLtJ_T0034955.1 MGP_NODShiLtJ_G0019734.1 mouse_genomes_project 12 88016004 88032407 - MGP_NODShiLtJ_P0034955 Vti1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034956.1 MGP_NODShiLtJ_G0019734.1 mouse_genomes_project 12 88016163 88025073 - MGP_NODShiLtJ_P0034956 Vti1b protein_coding protein_coding MGP_NODShiLtJ_T0034957.1 MGP_NODShiLtJ_G0019734.1 mouse_genomes_project 12 88016351 88026300 - MGP_NODShiLtJ_P0034957 Vti1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100000.1 MGP_NODShiLtJ_G0038394.1 mouse_genomes_project 12 71864289 71864375 + Gm25970 snoRNA snoRNA MGP_NODShiLtJ_T0009789.1 MGP_NODShiLtJ_G0007922.1 mouse_genomes_project 12 123084777 123084853 + Mir382 miRNA miRNA MGP_NODShiLtJ_T0000059.1 MGP_NODShiLtJ_G0000047.1 mouse_genomes_project 12 127499241 127499766 - MGP_NODShiLtJ_P0000059 Ighv5-9 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034344.1 MGP_NODShiLtJ_G0019502.1 mouse_genomes_project 12 27909342 27914807 - MGP_NODShiLtJ_P0034344 Rps7 protein_coding protein_coding MGP_NODShiLtJ_T0034345.1 MGP_NODShiLtJ_G0019502.1 mouse_genomes_project 12 27909611 27914907 - MGP_NODShiLtJ_P0034345 Rps7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034225.1 MGP_NODShiLtJ_G0019458.1 mouse_genomes_project 12 9887252 9888579 - MGP_NODShiLtJ_P0034225 protein_coding protein_coding MGP_NODShiLtJ_T0009700.1 MGP_NODShiLtJ_G0007833.1 mouse_genomes_project 12 36940803 36940877 + Mir5099 miRNA miRNA MGP_NODShiLtJ_T0009772.1 MGP_NODShiLtJ_G0007905.1 mouse_genomes_project 12 123066721 123066842 + Mir1193 miRNA miRNA MGP_NODShiLtJ_T0034341.1 MGP_NODShiLtJ_G0019500.1 mouse_genomes_project 12 27823558 27853908 - MGP_NODShiLtJ_P0034341 Allc protein_coding protein_coding MGP_NODShiLtJ_T0034342.1 MGP_NODShiLtJ_G0019500.1 mouse_genomes_project 12 27823558 27853916 - MGP_NODShiLtJ_P0034342 Allc protein_coding protein_coding MGP_NODShiLtJ_T0009695.1 MGP_NODShiLtJ_G0007828.1 mouse_genomes_project 12 29814565 29814669 - Gm25865 miRNA miRNA MGP_NODShiLtJ_T0034425.1 MGP_NODShiLtJ_G0019530.1 mouse_genomes_project 12 32433022 32474331 + MGP_NODShiLtJ_P0034425 Nampt protein_coding protein_coding MGP_NODShiLtJ_T0034683.1 MGP_NODShiLtJ_G0019628.1 mouse_genomes_project 12 68658262 68658685 + MGP_NODShiLtJ_P0034683 Spanxn4 protein_coding protein_coding MGP_NODShiLtJ_T0098787.1 MGP_NODShiLtJ_G0037181.1 mouse_genomes_project 12 131311536 131311640 - Gm25112 snRNA snRNA MGP_NODShiLtJ_T0000031.1 MGP_NODShiLtJ_G0000025.1 mouse_genomes_project 12 127303169 127303179 - IG_D_pseudogene IG_D_pseudogene MGP_NODShiLtJ_T0034203.1 MGP_NODShiLtJ_G0019446.1 mouse_genomes_project 12 6568395 6594589 + MGP_NODShiLtJ_P0034203 Matn3 protein_coding protein_coding MGP_NODShiLtJ_T0000075.1 MGP_NODShiLtJ_G0000059.1 mouse_genomes_project 12 127965037 127965500 - MGP_NODShiLtJ_P0000075 Ighv11-1 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0012747.1 MGP_NODShiLtJ_G0010855.1 mouse_genomes_project 12 135202378 135202820 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011209.1 MGP_NODShiLtJ_G0009342.1 mouse_genomes_project 12 1360614 1360900 + Gm22343 misc_RNA misc_RNA MGP_NODShiLtJ_T0035234.1 MGP_NODShiLtJ_G0019819.1 mouse_genomes_project 12 95355943 95366162 - MGP_NODShiLtJ_P0035234 0610007P14Rik protein_coding protein_coding MGP_NODShiLtJ_T0035235.1 MGP_NODShiLtJ_G0019819.1 mouse_genomes_project 12 95356154 95366152 - 0610007P14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0035236.1 MGP_NODShiLtJ_G0019819.1 mouse_genomes_project 12 95360736 95366184 - 0610007P14Rik protein_coding retained_intron MGP_NODShiLtJ_T0035237.1 MGP_NODShiLtJ_G0019819.1 mouse_genomes_project 12 95360971 95363890 - 0610007P14Rik protein_coding retained_intron MGP_NODShiLtJ_T0035238.1 MGP_NODShiLtJ_G0019819.1 mouse_genomes_project 12 95361178 95366190 - MGP_NODShiLtJ_P0035238 0610007P14Rik protein_coding protein_coding MGP_NODShiLtJ_T0012737.1 MGP_NODShiLtJ_G0010845.1 mouse_genomes_project 12 127155813 127156267 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035504.1 MGP_NODShiLtJ_G0019898.1 mouse_genomes_project 12 115272781 115274010 + MGP_NODShiLtJ_P0035504 Cox8c protein_coding protein_coding MGP_NODShiLtJ_T0017168.1 MGP_NODShiLtJ_G0015097.1 mouse_genomes_project 12 20056864 20060670 - Gm20535 processed_transcript processed_transcript MGP_NODShiLtJ_T0012704.1 MGP_NODShiLtJ_G0010812.1 mouse_genomes_project 12 84639403 84640917 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006393.1 MGP_NODShiLtJ_G0005325.1 mouse_genomes_project 12 119787934 119821288 - 4933406K04Rik lincRNA lincRNA MGP_NODShiLtJ_T0006394.1 MGP_NODShiLtJ_G0005325.1 mouse_genomes_project 12 119798968 119821250 - 4933406K04Rik lincRNA lincRNA MGP_NODShiLtJ_T0006395.1 MGP_NODShiLtJ_G0005325.1 mouse_genomes_project 12 119804357 119821259 - 4933406K04Rik lincRNA lincRNA MGP_NODShiLtJ_T0006396.1 MGP_NODShiLtJ_G0005325.1 mouse_genomes_project 12 119811094 119821288 - 4933406K04Rik lincRNA lincRNA MGP_NODShiLtJ_T0097907.1 MGP_NODShiLtJ_G0036319.1 mouse_genomes_project 12 10738889 10738994 - Gm27952 rRNA rRNA MGP_NODShiLtJ_T0017178.1 MGP_NODShiLtJ_G0015102.1 mouse_genomes_project 12 82173770 82197552 - Gm15283 processed_transcript processed_transcript MGP_NODShiLtJ_T0035580.1 MGP_NODShiLtJ_G0019922.1 mouse_genomes_project 12 116972317 116990200 + MGP_NODShiLtJ_P0035580 Serpina3i protein_coding protein_coding MGP_NODShiLtJ_T0035581.1 MGP_NODShiLtJ_G0019922.1 mouse_genomes_project 12 116972317 116990200 + MGP_NODShiLtJ_P0035581 Serpina3i protein_coding protein_coding MGP_NODShiLtJ_T0035582.1 MGP_NODShiLtJ_G0019922.1 mouse_genomes_project 12 116972719 116990202 + MGP_NODShiLtJ_P0035582 Serpina3i protein_coding protein_coding MGP_NODShiLtJ_T0100023.1 MGP_NODShiLtJ_G0038417.1 mouse_genomes_project 12 122996395 122996467 + DQ267100 snoRNA snoRNA MGP_NODShiLtJ_T0000091.1 MGP_NODShiLtJ_G0000070.1 mouse_genomes_project 12 128394479 128394908 - MGP_NODShiLtJ_P0000091 Ighv9-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000092.1 MGP_NODShiLtJ_G0000070.1 mouse_genomes_project 12 128394479 128394773 - MGP_NODShiLtJ_P0000092 Ighv9-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0009714.1 MGP_NODShiLtJ_G0007847.1 mouse_genomes_project 12 80545952 80546067 - Gm44392 miRNA miRNA MGP_NODShiLtJ_T0012715.1 MGP_NODShiLtJ_G0010823.1 mouse_genomes_project 12 98099324 98099758 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035388.1 MGP_NODShiLtJ_G0019858.1 mouse_genomes_project 12 106018551 106019098 - MGP_NODShiLtJ_P0035388 protein_coding protein_coding MGP_NODShiLtJ_T0009807.1 MGP_NODShiLtJ_G0007940.1 mouse_genomes_project 12 125713546 125713606 - Mir3073b miRNA miRNA MGP_NODShiLtJ_T0012738.1 MGP_NODShiLtJ_G0010846.1 mouse_genomes_project 12 127156271 127156628 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034450.1 MGP_NODShiLtJ_G0019537.1 mouse_genomes_project 12 33739142 33741289 + MGP_NODShiLtJ_P0034450 Twist1 protein_coding protein_coding MGP_NODShiLtJ_T0000261.1 MGP_NODShiLtJ_G0000199.1 mouse_genomes_project 12 129069046 129069480 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035593.1 MGP_NODShiLtJ_G0019932.1 mouse_genomes_project 12 117755316 117807022 - MGP_NODShiLtJ_P0035593 Syne3 protein_coding protein_coding MGP_NODShiLtJ_T0035306.1 MGP_NODShiLtJ_G0019838.1 mouse_genomes_project 12 96943066 96950324 + MGP_NODShiLtJ_P0035306 Ahsa1 protein_coding protein_coding MGP_NODShiLtJ_T0099976.1 MGP_NODShiLtJ_G0038370.1 mouse_genomes_project 12 16176779 16176915 + Gm22748 snoRNA snoRNA MGP_NODShiLtJ_T0009733.1 MGP_NODShiLtJ_G0007866.1 mouse_genomes_project 12 121918293 121918391 + Mir342 miRNA miRNA MGP_NODShiLtJ_T0006373.1 MGP_NODShiLtJ_G0005306.1 mouse_genomes_project 12 95723780 95749195 + Gm805 lincRNA lincRNA MGP_NODShiLtJ_T0000072.1 MGP_NODShiLtJ_G0000057.1 mouse_genomes_project 12 127849708 127850167 - MGP_NODShiLtJ_P0000072 Ighv7-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000073.1 MGP_NODShiLtJ_G0000057.1 mouse_genomes_project 12 127849708 127850167 - MGP_NODShiLtJ_P0000073 Ighv7-2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0035164.1 MGP_NODShiLtJ_G0019792.1 mouse_genomes_project 12 93882083 93903413 - MGP_NODShiLtJ_P0035164 Aldh6a1 protein_coding protein_coding MGP_NODShiLtJ_T0034953.1 MGP_NODShiLtJ_G0019733.1 mouse_genomes_project 12 87987914 88016136 + MGP_NODShiLtJ_P0034953 Arg2 protein_coding protein_coding MGP_NODShiLtJ_T0035069.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92993372 93015783 + MGP_NODShiLtJ_P0035069 Rbm25 protein_coding protein_coding MGP_NODShiLtJ_T0035070.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92993372 93052944 + MGP_NODShiLtJ_P0035070 Rbm25 protein_coding protein_coding MGP_NODShiLtJ_T0035071.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92994275 93061649 + MGP_NODShiLtJ_P0035071 Rbm25 protein_coding protein_coding MGP_NODShiLtJ_T0035072.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92994276 93028695 + MGP_NODShiLtJ_P0035072 Rbm25 protein_coding protein_coding MGP_NODShiLtJ_T0035073.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92994280 93015781 + MGP_NODShiLtJ_P0035073 Rbm25 protein_coding protein_coding MGP_NODShiLtJ_T0035074.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92994314 93036756 + MGP_NODShiLtJ_P0035074 Rbm25 protein_coding protein_coding MGP_NODShiLtJ_T0035075.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92994329 93007755 + MGP_NODShiLtJ_P0035075 Rbm25 protein_coding protein_coding MGP_NODShiLtJ_T0035076.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92994349 93042524 + MGP_NODShiLtJ_P0035076 Rbm25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035077.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 92996707 93004425 + Rbm25 protein_coding retained_intron MGP_NODShiLtJ_T0035078.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93007610 93028714 + Rbm25 protein_coding retained_intron MGP_NODShiLtJ_T0035079.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93007695 93060546 + MGP_NODShiLtJ_P0035079 Rbm25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035080.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93007755 93047008 + Rbm25 protein_coding retained_intron MGP_NODShiLtJ_T0035081.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93015732 93029074 + Rbm25 protein_coding processed_transcript MGP_NODShiLtJ_T0035082.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93022590 93029431 + Rbm25 protein_coding retained_intron MGP_NODShiLtJ_T0035083.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93035816 93036876 + Rbm25 protein_coding retained_intron MGP_NODShiLtJ_T0035084.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93041500 93042524 + Rbm25 protein_coding processed_transcript MGP_NODShiLtJ_T0035085.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93053051 93054638 + Rbm25 protein_coding processed_transcript MGP_NODShiLtJ_T0035086.1 MGP_NODShiLtJ_G0019769.1 mouse_genomes_project 12 93053379 93056425 + Rbm25 protein_coding retained_intron MGP_NODShiLtJ_T0034742.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77706817 77808702 - Map4k5 protein_coding processed_transcript MGP_NODShiLtJ_T0034743.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77706817 77808608 - MGP_NODShiLtJ_P0034743 Map4k5 protein_coding protein_coding MGP_NODShiLtJ_T0034744.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77706817 77808799 - MGP_NODShiLtJ_P0034744 Map4k5 protein_coding protein_coding MGP_NODShiLtJ_T0034745.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77706818 77721922 - MGP_NODShiLtJ_P0034745 Map4k5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034746.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77706826 77808762 - MGP_NODShiLtJ_P0034746 Map4k5 protein_coding protein_coding MGP_NODShiLtJ_T0034747.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77706826 77808702 - MGP_NODShiLtJ_P0034747 Map4k5 protein_coding protein_coding MGP_NODShiLtJ_T0034748.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77706828 77721511 - Map4k5 protein_coding retained_intron MGP_NODShiLtJ_T0034749.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77720839 77721916 - Map4k5 protein_coding processed_transcript MGP_NODShiLtJ_T0034750.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77747883 77788836 - Map4k5 protein_coding retained_intron MGP_NODShiLtJ_T0034751.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77751558 77808722 - Map4k5 protein_coding retained_intron MGP_NODShiLtJ_T0034752.1 MGP_NODShiLtJ_G0019657.1 mouse_genomes_project 12 77752028 77762649 - Map4k5 protein_coding retained_intron MGP_NODShiLtJ_T0006349.1 MGP_NODShiLtJ_G0005288.1 mouse_genomes_project 12 55697419 55698866 + Gm26517 lincRNA lincRNA MGP_NODShiLtJ_T0000060.1 MGP_NODShiLtJ_G0000048.1 mouse_genomes_project 12 127597242 127597697 - MGP_NODShiLtJ_P0000060 Ighv5-12 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034213.1 MGP_NODShiLtJ_G0019450.1 mouse_genomes_project 12 8179273 8202017 + MGP_NODShiLtJ_P0034213 Nt5c1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034214.1 MGP_NODShiLtJ_G0019450.1 mouse_genomes_project 12 8179279 8202020 + MGP_NODShiLtJ_P0034214 Nt5c1b protein_coding protein_coding MGP_NODShiLtJ_T0034215.1 MGP_NODShiLtJ_G0019450.1 mouse_genomes_project 12 8179279 8185607 + MGP_NODShiLtJ_P0034215 Nt5c1b protein_coding protein_coding MGP_NODShiLtJ_T0034216.1 MGP_NODShiLtJ_G0019450.1 mouse_genomes_project 12 8179344 8202017 + MGP_NODShiLtJ_P0034216 Nt5c1b protein_coding protein_coding MGP_NODShiLtJ_T0000128.1 MGP_NODShiLtJ_G0000095.1 mouse_genomes_project 12 129572835 129573269 - MGP_NODShiLtJ_P0000128 Ighv8-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000129.1 MGP_NODShiLtJ_G0000095.1 mouse_genomes_project 12 129572835 129573129 - MGP_NODShiLtJ_P0000129 Ighv8-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034218.1 MGP_NODShiLtJ_G0019452.1 mouse_genomes_project 12 8993939 9069720 - MGP_NODShiLtJ_P0034218 Kcns3 protein_coding protein_coding MGP_NODShiLtJ_T0034219.1 MGP_NODShiLtJ_G0019452.1 mouse_genomes_project 12 8993939 9069251 - MGP_NODShiLtJ_P0034219 Kcns3 protein_coding protein_coding MGP_NODShiLtJ_T0000133.1 MGP_NODShiLtJ_G0000098.1 mouse_genomes_project 12 130270090 130270383 - MGP_NODShiLtJ_P0000133 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000279.1 MGP_NODShiLtJ_G0000217.1 mouse_genomes_project 12 130805046 130805481 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000100.1 MGP_NODShiLtJ_G0000076.1 mouse_genomes_project 12 128540046 128540504 - MGP_NODShiLtJ_P0000100 Ighv6-5 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000101.1 MGP_NODShiLtJ_G0000076.1 mouse_genomes_project 12 128540049 128540346 - MGP_NODShiLtJ_P0000101 Ighv6-5 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034731.1 MGP_NODShiLtJ_G0019652.1 mouse_genomes_project 12 77450205 77455630 - MGP_NODShiLtJ_P0034731 Vcpkmt protein_coding protein_coding MGP_NODShiLtJ_T0034597.1 MGP_NODShiLtJ_G0019598.1 mouse_genomes_project 12 59226921 59288631 + MGP_NODShiLtJ_P0034597 protein_coding protein_coding MGP_NODShiLtJ_T0098762.1 MGP_NODShiLtJ_G0037156.1 mouse_genomes_project 12 63754281 63754472 + Gm22973 snRNA snRNA MGP_NODShiLtJ_T0035844.1 MGP_NODShiLtJ_G0020016.1 mouse_genomes_project 12 126647314 126687825 - MGP_NODShiLtJ_P0035844 Brf1 protein_coding protein_coding MGP_NODShiLtJ_T0003341.1 MGP_NODShiLtJ_G0003067.1 mouse_genomes_project 12 60874171 60960674 + Gm26973 antisense antisense MGP_NODShiLtJ_T0003342.1 MGP_NODShiLtJ_G0003067.1 mouse_genomes_project 12 60876119 60915585 + Gm26973 antisense antisense MGP_NODShiLtJ_T0003343.1 MGP_NODShiLtJ_G0003067.1 mouse_genomes_project 12 60876170 60960711 + Gm26973 antisense antisense MGP_NODShiLtJ_T0035533.1 MGP_NODShiLtJ_G0019905.1 mouse_genomes_project 12 115835926 115853726 - MGP_NODShiLtJ_P0035533 Ddx24 protein_coding protein_coding MGP_NODShiLtJ_T0035534.1 MGP_NODShiLtJ_G0019905.1 mouse_genomes_project 12 115835926 115853813 - MGP_NODShiLtJ_P0035534 Ddx24 protein_coding protein_coding MGP_NODShiLtJ_T0034241.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15227513 15321074 - MGP_NODShiLtJ_P0034241 Greb1 protein_coding protein_coding MGP_NODShiLtJ_T0034242.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15227513 15367885 - MGP_NODShiLtJ_P0034242 Greb1 protein_coding protein_coding MGP_NODShiLtJ_T0034243.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15228978 15321028 - MGP_NODShiLtJ_P0034243 Greb1 protein_coding protein_coding MGP_NODShiLtJ_T0034244.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15230720 15231952 - Greb1 protein_coding retained_intron MGP_NODShiLtJ_T0034245.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15240088 15248073 - Greb1 protein_coding retained_intron MGP_NODShiLtJ_T0034246.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15247801 15301009 - Greb1 protein_coding retained_intron MGP_NODShiLtJ_T0034247.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15260737 15267716 - Greb1 protein_coding retained_intron MGP_NODShiLtJ_T0034248.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15265833 15268127 - Greb1 protein_coding retained_intron MGP_NODShiLtJ_T0034249.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15265844 15268267 - MGP_NODShiLtJ_P0034249 Greb1 protein_coding protein_coding MGP_NODShiLtJ_T0034250.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15267578 15271453 - MGP_NODShiLtJ_P0034250 Greb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034251.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15282851 15300910 - Greb1 protein_coding retained_intron MGP_NODShiLtJ_T0034252.1 MGP_NODShiLtJ_G0019469.1 mouse_genomes_project 12 15294055 15368082 - MGP_NODShiLtJ_P0034252 Greb1 protein_coding protein_coding MGP_NODShiLtJ_T0012718.1 MGP_NODShiLtJ_G0010826.1 mouse_genomes_project 12 102200511 102203013 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000273.1 MGP_NODShiLtJ_G0000211.1 mouse_genomes_project 12 130204175 130204475 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0012734.1 MGP_NODShiLtJ_G0010842.1 mouse_genomes_project 12 121688300 121689058 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035715.1 MGP_NODShiLtJ_G0019970.1 mouse_genomes_project 12 124178725 124273766 + MGP_NODShiLtJ_P0035715 protein_coding protein_coding MGP_NODShiLtJ_T0035716.1 MGP_NODShiLtJ_G0019970.1 mouse_genomes_project 12 124178761 124260709 + MGP_NODShiLtJ_P0035716 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035717.1 MGP_NODShiLtJ_G0019970.1 mouse_genomes_project 12 124178770 124181022 + protein_coding retained_intron MGP_NODShiLtJ_T0035718.1 MGP_NODShiLtJ_G0019970.1 mouse_genomes_project 12 124178799 124186278 + protein_coding processed_transcript MGP_NODShiLtJ_T0035719.1 MGP_NODShiLtJ_G0019970.1 mouse_genomes_project 12 124178990 124260881 + MGP_NODShiLtJ_P0035719 protein_coding protein_coding MGP_NODShiLtJ_T0006337.1 MGP_NODShiLtJ_G0005278.1 mouse_genomes_project 12 27737040 27741275 - 1700022F17Rik lincRNA lincRNA MGP_NODShiLtJ_T0035232.1 MGP_NODShiLtJ_G0019817.1 mouse_genomes_project 12 95211662 95235053 + MGP_NODShiLtJ_P0035232 Batf protein_coding protein_coding MGP_NODShiLtJ_T0034598.1 MGP_NODShiLtJ_G0019599.1 mouse_genomes_project 12 59321961 59496718 - MGP_NODShiLtJ_P0034598 Ppp2r3c protein_coding protein_coding MGP_NODShiLtJ_T0003340.1 MGP_NODShiLtJ_G0003066.1 mouse_genomes_project 12 58080463 58099092 - 1700060O08Rik antisense antisense MGP_NODShiLtJ_T0035917.1 MGP_NODShiLtJ_G0020039.1 mouse_genomes_project 12 134570451 134606102 + MGP_NODShiLtJ_P0035917 Macc1 protein_coding protein_coding MGP_NODShiLtJ_T0034226.1 MGP_NODShiLtJ_G0019459.1 mouse_genomes_project 12 10300734 10418150 + MGP_NODShiLtJ_P0034226 Fam49a protein_coding protein_coding MGP_NODShiLtJ_T0034227.1 MGP_NODShiLtJ_G0019459.1 mouse_genomes_project 12 10300734 10418150 + MGP_NODShiLtJ_P0034227 Fam49a protein_coding protein_coding MGP_NODShiLtJ_T0009768.1 MGP_NODShiLtJ_G0007901.1 mouse_genomes_project 12 123063868 123063949 + Mir758 miRNA miRNA MGP_NODShiLtJ_T0035310.1 MGP_NODShiLtJ_G0019840.1 mouse_genomes_project 12 96985582 97071008 - MGP_NODShiLtJ_P0035310 Sptlc2 protein_coding protein_coding MGP_NODShiLtJ_T0035311.1 MGP_NODShiLtJ_G0019840.1 mouse_genomes_project 12 96988459 97024626 - Sptlc2 protein_coding retained_intron MGP_NODShiLtJ_T0035312.1 MGP_NODShiLtJ_G0019840.1 mouse_genomes_project 12 96990028 97008781 - Sptlc2 protein_coding processed_transcript MGP_NODShiLtJ_T0035313.1 MGP_NODShiLtJ_G0019840.1 mouse_genomes_project 12 97027235 97031168 - Sptlc2 protein_coding retained_intron MGP_NODShiLtJ_T0035314.1 MGP_NODShiLtJ_G0019840.1 mouse_genomes_project 12 97027511 97070894 - Sptlc2 protein_coding processed_transcript MGP_NODShiLtJ_T0035744.1 MGP_NODShiLtJ_G0019981.1 mouse_genomes_project 12 124915220 124921546 + MGP_NODShiLtJ_P0035744 A230065H16Rik protein_coding protein_coding MGP_NODShiLtJ_T0034172.1 MGP_NODShiLtJ_G0019436.1 mouse_genomes_project 12 2127387 2350293 - MGP_NODShiLtJ_P0034172 Klhl29 protein_coding protein_coding MGP_NODShiLtJ_T0035491.1 MGP_NODShiLtJ_G0019890.1 mouse_genomes_project 12 114912413 115057607 - MGP_NODShiLtJ_P0035491 Itpk1 protein_coding protein_coding MGP_NODShiLtJ_T0035492.1 MGP_NODShiLtJ_G0019890.1 mouse_genomes_project 12 114928114 114939361 - Itpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0035493.1 MGP_NODShiLtJ_G0019890.1 mouse_genomes_project 12 114931712 114991224 - MGP_NODShiLtJ_P0035493 Itpk1 protein_coding protein_coding MGP_NODShiLtJ_T0035494.1 MGP_NODShiLtJ_G0019890.1 mouse_genomes_project 12 114968655 115057705 - MGP_NODShiLtJ_P0035494 Itpk1 protein_coding protein_coding MGP_NODShiLtJ_T0098774.1 MGP_NODShiLtJ_G0037168.1 mouse_genomes_project 12 86030846 86031006 + Gm25926 snRNA snRNA MGP_NODShiLtJ_T0009774.1 MGP_NODShiLtJ_G0007907.1 mouse_genomes_project 12 123068274 123068350 + Mir543 miRNA miRNA MGP_NODShiLtJ_T0099979.1 MGP_NODShiLtJ_G0038373.1 mouse_genomes_project 12 26788754 26788879 + Gm24326 snoRNA snoRNA MGP_NODShiLtJ_T0034381.1 MGP_NODShiLtJ_G0019516.1 mouse_genomes_project 12 30641002 30641557 + MGP_NODShiLtJ_P0034381 6030469F06Rik protein_coding protein_coding MGP_NODShiLtJ_T0034951.1 MGP_NODShiLtJ_G0019731.1 mouse_genomes_project 12 87892221 87943027 + MGP_NODShiLtJ_P0034951 Plekhh1 protein_coding protein_coding MGP_NODShiLtJ_T0034504.1 MGP_NODShiLtJ_G0019558.1 mouse_genomes_project 12 41110636 41199877 - MGP_NODShiLtJ_P0034504 Scin protein_coding protein_coding MGP_NODShiLtJ_T0034505.1 MGP_NODShiLtJ_G0019558.1 mouse_genomes_project 12 41110640 41199922 - MGP_NODShiLtJ_P0034505 Scin protein_coding protein_coding MGP_NODShiLtJ_T0035652.1 MGP_NODShiLtJ_G0019954.1 mouse_genomes_project 12 121619954 121767340 + Eml1 protein_coding retained_intron MGP_NODShiLtJ_T0035653.1 MGP_NODShiLtJ_G0019954.1 mouse_genomes_project 12 121670886 121799803 + MGP_NODShiLtJ_P0035653 Eml1 protein_coding protein_coding MGP_NODShiLtJ_T0035654.1 MGP_NODShiLtJ_G0019954.1 mouse_genomes_project 12 121671160 121797755 + MGP_NODShiLtJ_P0035654 Eml1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035655.1 MGP_NODShiLtJ_G0019954.1 mouse_genomes_project 12 121671277 121799812 + MGP_NODShiLtJ_P0035655 Eml1 protein_coding protein_coding MGP_NODShiLtJ_T0035656.1 MGP_NODShiLtJ_G0019954.1 mouse_genomes_project 12 121725432 121799803 + Eml1 protein_coding processed_transcript MGP_NODShiLtJ_T0035657.1 MGP_NODShiLtJ_G0019954.1 mouse_genomes_project 12 121794962 121797650 + Eml1 protein_coding processed_transcript MGP_NODShiLtJ_T0035658.1 MGP_NODShiLtJ_G0019954.1 mouse_genomes_project 12 121795020 121799856 + Eml1 protein_coding processed_transcript MGP_NODShiLtJ_T0035894.1 MGP_NODShiLtJ_G0020030.1 mouse_genomes_project 12 131230928 131297385 + MGP_NODShiLtJ_P0035894 Ncapg2 protein_coding protein_coding MGP_NODShiLtJ_T0012713.1 MGP_NODShiLtJ_G0010821.1 mouse_genomes_project 12 96318841 96319300 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035757.1 MGP_NODShiLtJ_G0019984.1 mouse_genomes_project 12 125001827 125003040 - MGP_NODShiLtJ_P0035757 Gm266 protein_coding protein_coding MGP_NODShiLtJ_T0034818.1 MGP_NODShiLtJ_G0019680.1 mouse_genomes_project 12 80507778 80594497 + MGP_NODShiLtJ_P0034818 Lrrc9 protein_coding protein_coding MGP_NODShiLtJ_T0034819.1 MGP_NODShiLtJ_G0019680.1 mouse_genomes_project 12 80507845 80579026 + MGP_NODShiLtJ_P0034819 Lrrc9 protein_coding protein_coding MGP_NODShiLtJ_T0034820.1 MGP_NODShiLtJ_G0019680.1 mouse_genomes_project 12 80507861 80536777 + Lrrc9 protein_coding retained_intron MGP_NODShiLtJ_T0034821.1 MGP_NODShiLtJ_G0019680.1 mouse_genomes_project 12 80507947 80598266 + Lrrc9 protein_coding processed_transcript MGP_NODShiLtJ_T0034822.1 MGP_NODShiLtJ_G0019680.1 mouse_genomes_project 12 80508154 80521457 + Lrrc9 protein_coding retained_intron MGP_NODShiLtJ_T0034823.1 MGP_NODShiLtJ_G0019680.1 mouse_genomes_project 12 80508161 80544310 + Lrrc9 protein_coding retained_intron MGP_NODShiLtJ_T0034824.1 MGP_NODShiLtJ_G0019680.1 mouse_genomes_project 12 80508296 80596315 + MGP_NODShiLtJ_P0034824 Lrrc9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034825.1 MGP_NODShiLtJ_G0019680.1 mouse_genomes_project 12 80546173 80547761 + Lrrc9 protein_coding retained_intron MGP_NODShiLtJ_T0009767.1 MGP_NODShiLtJ_G0007900.1 mouse_genomes_project 12 123063566 123063652 + Mir323 miRNA miRNA MGP_NODShiLtJ_T0009692.1 MGP_NODShiLtJ_G0007825.1 mouse_genomes_project 12 15963943 15964026 + Mir3066 miRNA miRNA MGP_NODShiLtJ_T0035068.1 MGP_NODShiLtJ_G0019768.1 mouse_genomes_project 12 92901243 92957406 - MGP_NODShiLtJ_P0035068 Zfyve1 protein_coding protein_coding MGP_NODShiLtJ_T0035367.1 MGP_NODShiLtJ_G0019854.1 mouse_genomes_project 12 101605936 101746570 + MGP_NODShiLtJ_P0035367 Tshr protein_coding protein_coding MGP_NODShiLtJ_T0035368.1 MGP_NODShiLtJ_G0019854.1 mouse_genomes_project 12 101605942 101728596 + MGP_NODShiLtJ_P0035368 Tshr protein_coding protein_coding MGP_NODShiLtJ_T0035369.1 MGP_NODShiLtJ_G0019854.1 mouse_genomes_project 12 101744126 101745617 + MGP_NODShiLtJ_P0035369 Tshr protein_coding protein_coding MGP_NODShiLtJ_T0098783.1 MGP_NODShiLtJ_G0037177.1 mouse_genomes_project 12 112899865 112899971 - Gm25801 snRNA snRNA MGP_NODShiLtJ_T0003369.1 MGP_NODShiLtJ_G0003090.1 mouse_genomes_project 12 115730155 115731794 - Gm29508 antisense antisense MGP_NODShiLtJ_T0003370.1 MGP_NODShiLtJ_G0003090.1 mouse_genomes_project 12 115730156 115732558 - Gm29508 antisense antisense MGP_NODShiLtJ_T0034173.1 MGP_NODShiLtJ_G0019437.1 mouse_genomes_project 12 5467404 5479039 + MGP_NODShiLtJ_P0034173 Apob protein_coding protein_coding MGP_NODShiLtJ_T0034174.1 MGP_NODShiLtJ_G0019437.1 mouse_genomes_project 12 5467404 5512091 + MGP_NODShiLtJ_P0034174 Apob protein_coding protein_coding MGP_NODShiLtJ_T0034175.1 MGP_NODShiLtJ_G0019437.1 mouse_genomes_project 12 5467535 5511756 + MGP_NODShiLtJ_P0034175 Apob protein_coding protein_coding MGP_NODShiLtJ_T0034176.1 MGP_NODShiLtJ_G0019437.1 mouse_genomes_project 12 5506044 5512091 + MGP_NODShiLtJ_P0034176 Apob protein_coding protein_coding MGP_NODShiLtJ_T0009784.1 MGP_NODShiLtJ_G0007917.1 mouse_genomes_project 12 123078309 123078391 + Mir487b miRNA miRNA MGP_NODShiLtJ_T0035136.1 MGP_NODShiLtJ_G0019786.1 mouse_genomes_project 12 93749611 93782874 + MGP_NODShiLtJ_P0035136 Zfp410 protein_coding protein_coding MGP_NODShiLtJ_T0035435.1 MGP_NODShiLtJ_G0019873.1 mouse_genomes_project 12 112206734 112241312 - MGP_NODShiLtJ_P0035435 Nrde2 protein_coding protein_coding MGP_NODShiLtJ_T0101584.1 MGP_NODShiLtJ_G0039753.1 mouse_genomes_project 12 116178659 116180783 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006386.1 MGP_NODShiLtJ_G0005319.1 mouse_genomes_project 12 115074324 115082510 - Gm21971 lincRNA lincRNA MGP_NODShiLtJ_T0034984.1 MGP_NODShiLtJ_G0019748.1 mouse_genomes_project 12 89819720 89914882 + MGP_NODShiLtJ_P0034984 Susd6 protein_coding protein_coding MGP_NODShiLtJ_T0035104.1 MGP_NODShiLtJ_G0019774.1 mouse_genomes_project 12 93352465 93353131 - MGP_NODShiLtJ_P0035104 Gm26571 protein_coding protein_coding MGP_NODShiLtJ_T0099975.1 MGP_NODShiLtJ_G0038369.1 mouse_genomes_project 12 15511871 15511993 + Gm22303 snoRNA snoRNA MGP_NODShiLtJ_T0009709.1 MGP_NODShiLtJ_G0007842.1 mouse_genomes_project 12 77224115 77224195 - miRNA miRNA MGP_NODShiLtJ_T0034611.1 MGP_NODShiLtJ_G0019604.1 mouse_genomes_project 12 59712521 59715758 - MGP_NODShiLtJ_P0034611 Nfkbia protein_coding protein_coding MGP_NODShiLtJ_T0000266.1 MGP_NODShiLtJ_G0000204.1 mouse_genomes_project 12 129422079 129422512 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034183.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6239147 6347032 + MGP_NODShiLtJ_P0034183 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034184.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6239147 6348159 + MGP_NODShiLtJ_P0034184 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034185.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6239158 6345898 + MGP_NODShiLtJ_P0034185 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034186.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6240422 6348139 + MGP_NODShiLtJ_P0034186 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034187.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6240423 6348135 + MGP_NODShiLtJ_P0034187 Pum2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034188.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6240471 6348132 + MGP_NODShiLtJ_P0034188 Pum2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034189.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6240538 6344645 + MGP_NODShiLtJ_P0034189 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034190.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6240587 6344713 + MGP_NODShiLtJ_P0034190 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034191.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6240798 6348159 + MGP_NODShiLtJ_P0034191 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034192.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6240853 6295087 + MGP_NODShiLtJ_P0034192 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034193.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6240882 6294856 + MGP_NODShiLtJ_P0034193 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034194.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6243651 6277505 + MGP_NODShiLtJ_P0034194 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034195.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6264948 6295370 + MGP_NODShiLtJ_P0034195 Pum2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034196.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6278240 6305212 + MGP_NODShiLtJ_P0034196 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034197.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6318916 6342880 + MGP_NODShiLtJ_P0034197 Pum2 protein_coding protein_coding MGP_NODShiLtJ_T0034198.1 MGP_NODShiLtJ_G0019443.1 mouse_genomes_project 12 6336376 6337296 + Pum2 protein_coding retained_intron MGP_NODShiLtJ_T0035696.1 MGP_NODShiLtJ_G0019966.1 mouse_genomes_project 12 123858915 123998140 + MGP_NODShiLtJ_P0035696 Ppp2r5c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035697.1 MGP_NODShiLtJ_G0019966.1 mouse_genomes_project 12 123898140 124009478 + MGP_NODShiLtJ_P0035697 Ppp2r5c protein_coding protein_coding MGP_NODShiLtJ_T0035698.1 MGP_NODShiLtJ_G0019966.1 mouse_genomes_project 12 123898140 124009478 + MGP_NODShiLtJ_P0035698 Ppp2r5c protein_coding protein_coding MGP_NODShiLtJ_T0000244.1 MGP_NODShiLtJ_G0000182.1 mouse_genomes_project 12 128041694 128042101 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0034484.1 MGP_NODShiLtJ_G0019555.1 mouse_genomes_project 12 38345089 39347064 + MGP_NODShiLtJ_P0034484 Dgkb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0034485.1 MGP_NODShiLtJ_G0019555.1 mouse_genomes_project 12 38345260 39346227 + MGP_NODShiLtJ_P0034485 Dgkb protein_coding protein_coding MGP_NODShiLtJ_T0034236.1 MGP_NODShiLtJ_G0019466.1 mouse_genomes_project 12 14294731 14319825 - MGP_NODShiLtJ_P0034236 Trib2 protein_coding protein_coding MGP_NODShiLtJ_T0034237.1 MGP_NODShiLtJ_G0019466.1 mouse_genomes_project 12 14318923 14319917 - Trib2 protein_coding processed_transcript MGP_NODShiLtJ_T0034432.1 MGP_NODShiLtJ_G0019532.1 mouse_genomes_project 12 32676868 32736724 - MGP_NODShiLtJ_P0034432 Cdhr3 protein_coding protein_coding MGP_NODShiLtJ_T0097916.1 MGP_NODShiLtJ_G0036328.1 mouse_genomes_project 12 76406085 76406203 + n-R5s61 rRNA rRNA MGP_NODShiLtJ_T0003347.1 MGP_NODShiLtJ_G0003071.1 mouse_genomes_project 12 77109333 77114981 - Gm15561 antisense antisense MGP_NODShiLtJ_T0012708.1 MGP_NODShiLtJ_G0010816.1 mouse_genomes_project 12 90503856 90504168 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009715.1 MGP_NODShiLtJ_G0007848.1 mouse_genomes_project 12 84379133 84379213 + Mir5101 miRNA miRNA MGP_NODShiLtJ_T0006420.1 MGP_NODShiLtJ_G0005338.1 mouse_genomes_project 12 122986523 122988525 + Gm26945 lincRNA lincRNA MGP_NODShiLtJ_T0035634.1 MGP_NODShiLtJ_G0019946.1 mouse_genomes_project 12 119049527 119120512 + MGP_NODShiLtJ_P0035634 Vrk1 protein_coding protein_coding MGP_NODShiLtJ_T0035635.1 MGP_NODShiLtJ_G0019946.1 mouse_genomes_project 12 119050521 119119595 + MGP_NODShiLtJ_P0035635 Vrk1 protein_coding protein_coding MGP_NODShiLtJ_T0009699.1 MGP_NODShiLtJ_G0007832.1 mouse_genomes_project 12 35270907 35271022 + Gm44396 miRNA miRNA MGP_NODShiLtJ_T0009747.1 MGP_NODShiLtJ_G0007880.1 mouse_genomes_project 12 122930247 122930337 + Mir3070b miRNA miRNA MGP_NODShiLtJ_T0035546.1 MGP_NODShiLtJ_G0019909.1 mouse_genomes_project 12 115976631 116075172 + MGP_NODShiLtJ_P0035546 Ppp4r4 protein_coding protein_coding MGP_NODShiLtJ_T0035547.1 MGP_NODShiLtJ_G0019909.1 mouse_genomes_project 12 115981398 116074245 + MGP_NODShiLtJ_P0035547 Ppp4r4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035548.1 MGP_NODShiLtJ_G0019909.1 mouse_genomes_project 12 116009055 116074407 + MGP_NODShiLtJ_P0035548 Ppp4r4 protein_coding protein_coding MGP_NODShiLtJ_T0035549.1 MGP_NODShiLtJ_G0019909.1 mouse_genomes_project 12 116040414 116050616 + MGP_NODShiLtJ_P0035549 Ppp4r4 protein_coding protein_coding MGP_NODShiLtJ_T0035550.1 MGP_NODShiLtJ_G0019909.1 mouse_genomes_project 12 116059690 116064437 + MGP_NODShiLtJ_P0035550 Ppp4r4 protein_coding protein_coding MGP_NODShiLtJ_T0035592.1 MGP_NODShiLtJ_G0019931.1 mouse_genomes_project 12 117683883 117690254 + MGP_NODShiLtJ_P0035592 4930408O17Rik protein_coding protein_coding MGP_NODShiLtJ_T0003372.1 MGP_NODShiLtJ_G0003092.1 mouse_genomes_project 12 122325886 122326355 + Gm28498 antisense antisense MGP_NODShiLtJ_T0009787.1 MGP_NODShiLtJ_G0007920.1 mouse_genomes_project 12 123079817 123079940 + Gm27379 miRNA miRNA MGP_NODShiLtJ_T0098746.1 MGP_NODShiLtJ_G0037140.1 mouse_genomes_project 12 13269221 13269325 + Gm26449 snRNA snRNA MGP_NODShiLtJ_T0099997.1 MGP_NODShiLtJ_G0038391.1 mouse_genomes_project 12 64442719 64442850 - Gm24377 snoRNA snoRNA MGP_NODShiLtJ_T0000105.1 MGP_NODShiLtJ_G0000080.1 mouse_genomes_project 12 128638454 128638901 - MGP_NODShiLtJ_P0000105 Ighv10-1 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000252.1 MGP_NODShiLtJ_G0000190.1 mouse_genomes_project 12 128627880 128628341 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0000239.1 MGP_NODShiLtJ_G0000177.1 mouse_genomes_project 12 127807155 127807599 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035515.1 MGP_NODShiLtJ_G0019900.1 mouse_genomes_project 12 115599016 115646940 - MGP_NODShiLtJ_P0035515 Prima1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035516.1 MGP_NODShiLtJ_G0019900.1 mouse_genomes_project 12 115601479 115607456 - Prima1 protein_coding processed_transcript MGP_NODShiLtJ_T0035517.1 MGP_NODShiLtJ_G0019900.1 mouse_genomes_project 12 115601479 115646751 - MGP_NODShiLtJ_P0035517 Prima1 protein_coding protein_coding MGP_NODShiLtJ_T0035518.1 MGP_NODShiLtJ_G0019900.1 mouse_genomes_project 12 115601839 115646729 - MGP_NODShiLtJ_P0035518 Prima1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035519.1 MGP_NODShiLtJ_G0019900.1 mouse_genomes_project 12 115640239 115640625 - Prima1 protein_coding processed_transcript MGP_NODShiLtJ_T0035670.1 MGP_NODShiLtJ_G0019959.1 mouse_genomes_project 12 122130448 122136146 + MGP_NODShiLtJ_P0035670 Slc25a47 protein_coding protein_coding MGP_NODShiLtJ_T0099993.1 MGP_NODShiLtJ_G0038387.1 mouse_genomes_project 12 54822531 54822648 + Gm22088 snoRNA snoRNA MGP_NODShiLtJ_T0000269.1 MGP_NODShiLtJ_G0000207.1 mouse_genomes_project 12 129520422 129520856 - IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0035469.1 MGP_NODShiLtJ_G0019883.1 mouse_genomes_project 12 114198693 114244029 - MGP_NODShiLtJ_P0035469 Atxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035470.1 MGP_NODShiLtJ_G0019883.1 mouse_genomes_project 12 114202870 114214148 - MGP_NODShiLtJ_P0035470 Atxn3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035471.1 MGP_NODShiLtJ_G0019883.1 mouse_genomes_project 12 114212716 114244026 - MGP_NODShiLtJ_P0035471 Atxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035472.1 MGP_NODShiLtJ_G0019883.1 mouse_genomes_project 12 114212718 114244026 - MGP_NODShiLtJ_P0035472 Atxn3 protein_coding protein_coding MGP_NODShiLtJ_T0035473.1 MGP_NODShiLtJ_G0019883.1 mouse_genomes_project 12 114212741 114243931 - MGP_NODShiLtJ_P0035473 Atxn3 protein_coding protein_coding MGP_NODShiLtJ_T0000086.1 MGP_NODShiLtJ_G0000067.1 mouse_genomes_project 12 128344577 128345012 - MGP_NODShiLtJ_P0000086 Ighv3-4 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0034448.1 MGP_NODShiLtJ_G0019535.1 mouse_genomes_project 12 33088153 33099141 + MGP_NODShiLtJ_P0034448 Twistnb protein_coding protein_coding MGP_NODShiLtJ_T0017187.1 MGP_NODShiLtJ_G0015108.1 mouse_genomes_project 12 114193036 114195128 + Gm20036 processed_transcript processed_transcript MGP_NODShiLtJ_T0035393.1 MGP_NODShiLtJ_G0019862.1 mouse_genomes_project 12 110386423 110522463 - MGP_NODShiLtJ_P0035393 Kcnk10 protein_coding protein_coding MGP_NODShiLtJ_T0012684.1 MGP_NODShiLtJ_G0010792.1 mouse_genomes_project 12 55049746 55050220 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000835.1 MGP_NODShiLtJ_G0000765.1 mouse_genomes_project 12 24609569 24650460 - TEC TEC MGP_NODShiLtJ_T0100027.1 MGP_NODShiLtJ_G0038421.1 mouse_genomes_project 12 123003704 123003776 + DQ267102 snoRNA snoRNA MGP_NODShiLtJ_T0098770.1 MGP_NODShiLtJ_G0037164.1 mouse_genomes_project 12 77913801 77913904 - Gm23579 snRNA snRNA MGP_NODShiLtJ_T0034827.1 MGP_NODShiLtJ_G0019682.1 mouse_genomes_project 12 80715374 80726193 - MGP_NODShiLtJ_P0034827 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0000064.1 MGP_NODShiLtJ_G0000051.1 mouse_genomes_project 12 127726208 127726647 - MGP_NODShiLtJ_P0000064 Ighv2-7 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0006390.1 MGP_NODShiLtJ_G0005322.1 mouse_genomes_project 12 119397460 119400898 + Gm17032 lincRNA lincRNA MGP_NODShiLtJ_T0034975.1 MGP_NODShiLtJ_G0019743.1 mouse_genomes_project 12 89527686 89619547 + MGP_NODShiLtJ_P0034975 Galnt16 protein_coding protein_coding MGP_NODShiLtJ_T0032030.1 MGP_NODShiLtJ_G0018950.1 mouse_genomes_project 11 109435207 109435814 - MGP_NODShiLtJ_P0032030 Krtap3-1 protein_coding protein_coding MGP_NODShiLtJ_T0032994.1 MGP_NODShiLtJ_G0019189.1 mouse_genomes_project 11 120417172 120434850 + Arsg protein_coding processed_transcript MGP_NODShiLtJ_T0032995.1 MGP_NODShiLtJ_G0019189.1 mouse_genomes_project 11 120417172 120522461 + MGP_NODShiLtJ_P0032995 Arsg protein_coding protein_coding MGP_NODShiLtJ_T0032996.1 MGP_NODShiLtJ_G0019189.1 mouse_genomes_project 11 120429873 120434748 + Arsg protein_coding processed_transcript MGP_NODShiLtJ_T0032997.1 MGP_NODShiLtJ_G0019189.1 mouse_genomes_project 11 120430456 120522466 + MGP_NODShiLtJ_P0032997 Arsg protein_coding protein_coding MGP_NODShiLtJ_T0032998.1 MGP_NODShiLtJ_G0019189.1 mouse_genomes_project 11 120490377 120522466 + MGP_NODShiLtJ_P0032998 Arsg protein_coding protein_coding MGP_NODShiLtJ_T0030834.1 MGP_NODShiLtJ_G0018639.1 mouse_genomes_project 11 86311154 86331415 + MGP_NODShiLtJ_P0030834 Lyrm9 protein_coding protein_coding MGP_NODShiLtJ_T0030835.1 MGP_NODShiLtJ_G0018639.1 mouse_genomes_project 11 86311174 86322817 + MGP_NODShiLtJ_P0030835 Lyrm9 protein_coding protein_coding MGP_NODShiLtJ_T0030836.1 MGP_NODShiLtJ_G0018639.1 mouse_genomes_project 11 86311199 86323836 + Lyrm9 protein_coding processed_transcript MGP_NODShiLtJ_T0099927.1 MGP_NODShiLtJ_G0038321.1 mouse_genomes_project 11 61665756 61665852 + Gm22603 snoRNA snoRNA MGP_NODShiLtJ_T0012491.1 MGP_NODShiLtJ_G0010599.1 mouse_genomes_project 11 59747419 59747846 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031510.1 MGP_NODShiLtJ_G0018810.1 mouse_genomes_project 11 103806881 103817449 - Rsad1 protein_coding processed_transcript MGP_NODShiLtJ_T0031511.1 MGP_NODShiLtJ_G0018810.1 mouse_genomes_project 11 103806881 103817393 - MGP_NODShiLtJ_P0031511 Rsad1 protein_coding protein_coding MGP_NODShiLtJ_T0031512.1 MGP_NODShiLtJ_G0018810.1 mouse_genomes_project 11 103811687 103816986 - Rsad1 protein_coding processed_transcript MGP_NODShiLtJ_T0031513.1 MGP_NODShiLtJ_G0018810.1 mouse_genomes_project 11 103811752 103816796 - Rsad1 protein_coding processed_transcript MGP_NODShiLtJ_T0028209.1 MGP_NODShiLtJ_G0017982.1 mouse_genomes_project 11 33879743 33893116 - MGP_NODShiLtJ_P0028209 Il9r protein_coding protein_coding MGP_NODShiLtJ_T0028210.1 MGP_NODShiLtJ_G0017982.1 mouse_genomes_project 11 33881197 33893173 - MGP_NODShiLtJ_P0028210 Il9r protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028211.1 MGP_NODShiLtJ_G0017982.1 mouse_genomes_project 11 33882483 33893130 - MGP_NODShiLtJ_P0028211 Il9r protein_coding protein_coding MGP_NODShiLtJ_T0028212.1 MGP_NODShiLtJ_G0017982.1 mouse_genomes_project 11 33882700 33893116 - MGP_NODShiLtJ_P0028212 Il9r protein_coding protein_coding MGP_NODShiLtJ_T0028213.1 MGP_NODShiLtJ_G0017982.1 mouse_genomes_project 11 33886784 33893173 - Il9r protein_coding retained_intron MGP_NODShiLtJ_T0030439.1 MGP_NODShiLtJ_G0018552.1 mouse_genomes_project 11 82294468 82299413 - MGP_NODShiLtJ_P0030439 Hic1 protein_coding protein_coding MGP_NODShiLtJ_T0030440.1 MGP_NODShiLtJ_G0018552.1 mouse_genomes_project 11 82297056 82298050 - Hic1 protein_coding processed_transcript MGP_NODShiLtJ_T0101565.1 MGP_NODShiLtJ_G0039735.1 mouse_genomes_project 11 104188213 104188958 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0029367.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67692674 67867035 + Specc1 protein_coding retained_intron MGP_NODShiLtJ_T0029368.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67692674 67893143 + MGP_NODShiLtJ_P0029368 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029369.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67692690 67893595 + MGP_NODShiLtJ_P0029369 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029370.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67692721 67786565 + Specc1 protein_coding retained_intron MGP_NODShiLtJ_T0029371.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67692726 67970333 + MGP_NODShiLtJ_P0029371 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029372.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67713831 67817079 + Specc1 protein_coding processed_transcript MGP_NODShiLtJ_T0029373.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67746075 67893143 + MGP_NODShiLtJ_P0029373 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029374.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67759897 67896813 + MGP_NODShiLtJ_P0029374 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029375.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67759913 67970785 + MGP_NODShiLtJ_P0029375 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029376.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67770243 67975338 + MGP_NODShiLtJ_P0029376 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029377.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67770266 67977222 + MGP_NODShiLtJ_P0029377 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029378.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67820368 67977214 + MGP_NODShiLtJ_P0029378 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029379.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67820372 67970483 + MGP_NODShiLtJ_P0029379 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029380.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67820418 67821693 + Specc1 protein_coding retained_intron MGP_NODShiLtJ_T0029381.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67820432 67893156 + MGP_NODShiLtJ_P0029381 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029382.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67820464 67893594 + MGP_NODShiLtJ_P0029382 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0029383.1 MGP_NODShiLtJ_G0018300.1 mouse_genomes_project 11 67820470 67977222 + MGP_NODShiLtJ_P0029383 Specc1 protein_coding protein_coding MGP_NODShiLtJ_T0009662.1 MGP_NODShiLtJ_G0007795.1 mouse_genomes_project 11 112926759 112926868 - Gm22920 miRNA miRNA MGP_NODShiLtJ_T0028781.1 MGP_NODShiLtJ_G0018138.1 mouse_genomes_project 11 57554427 58008942 + MGP_NODShiLtJ_P0028781 Fstl4 protein_coding protein_coding MGP_NODShiLtJ_T0012435.1 MGP_NODShiLtJ_G0010543.1 mouse_genomes_project 11 33877480 33878177 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028455.1 MGP_NODShiLtJ_G0018048.1 mouse_genomes_project 11 50366476 50377840 + Fam71b protein_coding processed_transcript MGP_NODShiLtJ_T0028456.1 MGP_NODShiLtJ_G0018048.1 mouse_genomes_project 11 50374638 50379186 + MGP_NODShiLtJ_P0028456 Fam71b protein_coding protein_coding MGP_NODShiLtJ_T0006307.1 MGP_NODShiLtJ_G0005252.1 mouse_genomes_project 11 129302078 129303058 + Gm11729 lincRNA lincRNA MGP_NODShiLtJ_T0009651.1 MGP_NODShiLtJ_G0007784.1 mouse_genomes_project 11 107629548 107629618 - Gm22461 miRNA miRNA MGP_NODShiLtJ_T0029473.1 MGP_NODShiLtJ_G0018320.1 mouse_genomes_project 11 69892217 70024829 - MGP_NODShiLtJ_P0029473 Cox10 protein_coding protein_coding MGP_NODShiLtJ_T0029474.1 MGP_NODShiLtJ_G0018320.1 mouse_genomes_project 11 70016724 70024831 - Cox10 protein_coding processed_transcript MGP_NODShiLtJ_T0028543.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53598554 53617374 + MGP_NODShiLtJ_P0028543 Mgat1 protein_coding protein_coding MGP_NODShiLtJ_T0028544.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53598609 53617379 + MGP_NODShiLtJ_P0028544 Mgat1 protein_coding protein_coding MGP_NODShiLtJ_T0028545.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53598772 53599816 + Mgat1 protein_coding processed_transcript MGP_NODShiLtJ_T0028546.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53598928 53599773 + Mgat1 protein_coding processed_transcript MGP_NODShiLtJ_T0028547.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53599586 53615043 + Mgat1 protein_coding processed_transcript MGP_NODShiLtJ_T0028548.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53601832 53617347 + MGP_NODShiLtJ_P0028548 Mgat1 protein_coding protein_coding MGP_NODShiLtJ_T0028549.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53601838 53615174 + Mgat1 protein_coding processed_transcript MGP_NODShiLtJ_T0028550.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53603312 53605993 + Mgat1 protein_coding processed_transcript MGP_NODShiLtJ_T0028551.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53604867 53617382 + MGP_NODShiLtJ_P0028551 Mgat1 protein_coding protein_coding MGP_NODShiLtJ_T0028552.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53604920 53612328 + Mgat1 protein_coding processed_transcript MGP_NODShiLtJ_T0028553.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53604927 53615043 + Mgat1 protein_coding processed_transcript MGP_NODShiLtJ_T0028554.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53604945 53615643 + MGP_NODShiLtJ_P0028554 Mgat1 protein_coding protein_coding MGP_NODShiLtJ_T0028555.1 MGP_NODShiLtJ_G0018076.1 mouse_genomes_project 11 53610599 53612190 + Mgat1 protein_coding processed_transcript MGP_NODShiLtJ_T0099949.1 MGP_NODShiLtJ_G0038343.1 mouse_genomes_project 11 86024627 86024718 - Gm22947 snoRNA snoRNA MGP_NODShiLtJ_T0012508.1 MGP_NODShiLtJ_G0010616.1 mouse_genomes_project 11 65094635 65095286 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028373.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47126212 47132093 - MGP_NODShiLtJ_P0028373 Pttg1 protein_coding protein_coding MGP_NODShiLtJ_T0028374.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47126226 47131816 - MGP_NODShiLtJ_P0028374 Pttg1 protein_coding protein_coding MGP_NODShiLtJ_T0028375.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47126227 47128813 - MGP_NODShiLtJ_P0028375 Pttg1 protein_coding protein_coding MGP_NODShiLtJ_T0028376.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47126231 47132037 - MGP_NODShiLtJ_P0028376 Pttg1 protein_coding protein_coding MGP_NODShiLtJ_T0028377.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47126235 47132052 - MGP_NODShiLtJ_P0028377 Pttg1 protein_coding protein_coding MGP_NODShiLtJ_T0028378.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47126236 47131798 - MGP_NODShiLtJ_P0028378 Pttg1 protein_coding protein_coding MGP_NODShiLtJ_T0028379.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47126240 47131816 - MGP_NODShiLtJ_P0028379 Pttg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028380.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47126993 47132062 - MGP_NODShiLtJ_P0028380 Pttg1 protein_coding protein_coding MGP_NODShiLtJ_T0028381.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47128741 47131953 - Pttg1 protein_coding processed_transcript MGP_NODShiLtJ_T0028382.1 MGP_NODShiLtJ_G0018026.1 mouse_genomes_project 11 47130456 47132048 - Pttg1 protein_coding retained_intron MGP_NODShiLtJ_T0012536.1 MGP_NODShiLtJ_G0010644.1 mouse_genomes_project 11 76961811 76962349 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017159.1 MGP_NODShiLtJ_G0015089.1 mouse_genomes_project 11 125669323 125670265 + 1700092K14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0030994.1 MGP_NODShiLtJ_G0018683.1 mouse_genomes_project 11 90658083 90665729 - MGP_NODShiLtJ_P0030994 Nle1 protein_coding protein_coding MGP_NODShiLtJ_T0030995.1 MGP_NODShiLtJ_G0018683.1 mouse_genomes_project 11 90658087 90659132 - Nle1 protein_coding retained_intron MGP_NODShiLtJ_T0030996.1 MGP_NODShiLtJ_G0018683.1 mouse_genomes_project 11 90658095 90661605 - MGP_NODShiLtJ_P0030996 Nle1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030997.1 MGP_NODShiLtJ_G0018683.1 mouse_genomes_project 11 90659054 90661584 - Nle1 protein_coding retained_intron MGP_NODShiLtJ_T0030998.1 MGP_NODShiLtJ_G0018683.1 mouse_genomes_project 11 90661421 90661952 - Nle1 protein_coding retained_intron MGP_NODShiLtJ_T0030999.1 MGP_NODShiLtJ_G0018683.1 mouse_genomes_project 11 90662107 90665005 - MGP_NODShiLtJ_P0030999 Nle1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031000.1 MGP_NODShiLtJ_G0018683.1 mouse_genomes_project 11 90662237 90665660 - Nle1 protein_coding retained_intron MGP_NODShiLtJ_T0033775.1 MGP_NODShiLtJ_G0019347.1 mouse_genomes_project 11 132176064 132184287 - MGP_NODShiLtJ_P0033775 Enthd2 protein_coding protein_coding MGP_NODShiLtJ_T0033776.1 MGP_NODShiLtJ_G0019347.1 mouse_genomes_project 11 132176064 132184287 - MGP_NODShiLtJ_P0033776 Enthd2 protein_coding protein_coding MGP_NODShiLtJ_T0033777.1 MGP_NODShiLtJ_G0019347.1 mouse_genomes_project 11 132176064 132184287 - MGP_NODShiLtJ_P0033777 Enthd2 protein_coding protein_coding MGP_NODShiLtJ_T0033778.1 MGP_NODShiLtJ_G0019347.1 mouse_genomes_project 11 132179693 132182941 - Enthd2 protein_coding processed_transcript MGP_NODShiLtJ_T0033779.1 MGP_NODShiLtJ_G0019347.1 mouse_genomes_project 11 132181085 132182816 - Enthd2 protein_coding processed_transcript MGP_NODShiLtJ_T0033780.1 MGP_NODShiLtJ_G0019347.1 mouse_genomes_project 11 132182454 132184256 - Enthd2 protein_coding processed_transcript MGP_NODShiLtJ_T0028394.1 MGP_NODShiLtJ_G0018030.1 mouse_genomes_project 11 47322510 47324589 + MGP_NODShiLtJ_P0028394 4933415A04Rik protein_coding protein_coding MGP_NODShiLtJ_T0028966.1 MGP_NODShiLtJ_G0018185.1 mouse_genomes_project 11 60540202 60576446 + MGP_NODShiLtJ_P0028966 G3bp1 protein_coding protein_coding MGP_NODShiLtJ_T0028967.1 MGP_NODShiLtJ_G0018185.1 mouse_genomes_project 11 60540235 60559147 + G3bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0028274.1 MGP_NODShiLtJ_G0017998.1 mouse_genomes_project 11 35016217 35019067 - MGP_NODShiLtJ_P0028274 Tlx3 protein_coding protein_coding MGP_NODShiLtJ_T0011187.1 MGP_NODShiLtJ_G0009320.1 mouse_genomes_project 11 46516608 46516920 + Gm25543 misc_RNA misc_RNA MGP_NODShiLtJ_T0032421.1 MGP_NODShiLtJ_G0019071.1 mouse_genomes_project 11 112255808 112270013 + MGP_NODShiLtJ_P0032421 Cd300lg protein_coding protein_coding MGP_NODShiLtJ_T0032422.1 MGP_NODShiLtJ_G0019071.1 mouse_genomes_project 11 112255808 112270013 + MGP_NODShiLtJ_P0032422 Cd300lg protein_coding protein_coding MGP_NODShiLtJ_T0032423.1 MGP_NODShiLtJ_G0019071.1 mouse_genomes_project 11 112255808 112264918 + MGP_NODShiLtJ_P0032423 Cd300lg protein_coding protein_coding MGP_NODShiLtJ_T0032424.1 MGP_NODShiLtJ_G0019071.1 mouse_genomes_project 11 112255808 112270013 + MGP_NODShiLtJ_P0032424 Cd300lg protein_coding protein_coding MGP_NODShiLtJ_T0031918.1 MGP_NODShiLtJ_G0018915.1 mouse_genomes_project 11 108375328 108391837 + MGP_NODShiLtJ_P0031918 Gsdma3 protein_coding protein_coding MGP_NODShiLtJ_T0031919.1 MGP_NODShiLtJ_G0018915.1 mouse_genomes_project 11 108375328 108391756 + MGP_NODShiLtJ_P0031919 Gsdma3 protein_coding protein_coding MGP_NODShiLtJ_T0031141.1 MGP_NODShiLtJ_G0018725.1 mouse_genomes_project 11 92904843 92910572 - Znhit3 protein_coding processed_transcript MGP_NODShiLtJ_T0031142.1 MGP_NODShiLtJ_G0018725.1 mouse_genomes_project 11 92905019 92910781 - MGP_NODShiLtJ_P0031142 Znhit3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031143.1 MGP_NODShiLtJ_G0018725.1 mouse_genomes_project 11 92905021 92910589 - Znhit3 protein_coding processed_transcript MGP_NODShiLtJ_T0031144.1 MGP_NODShiLtJ_G0018725.1 mouse_genomes_project 11 92905057 92910528 - Znhit3 protein_coding processed_transcript MGP_NODShiLtJ_T0031145.1 MGP_NODShiLtJ_G0018725.1 mouse_genomes_project 11 92909661 92910547 - Znhit3 protein_coding retained_intron MGP_NODShiLtJ_T0097749.1 MGP_NODShiLtJ_G0036161.1 mouse_genomes_project 11 132765105 132765600 - pseudogene pseudogene MGP_NODShiLtJ_T0012464.1 MGP_NODShiLtJ_G0010572.1 mouse_genomes_project 11 52722879 52723540 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009620.1 MGP_NODShiLtJ_G0007753.1 mouse_genomes_project 11 82303281 82303372 + Mir212 miRNA miRNA MGP_NODShiLtJ_T0006168.1 MGP_NODShiLtJ_G0005149.1 mouse_genomes_project 11 50409509 50417069 - 2310031A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0012591.1 MGP_NODShiLtJ_G0010699.1 mouse_genomes_project 11 99068982 99069523 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030953.1 MGP_NODShiLtJ_G0018669.1 mouse_genomes_project 11 89713165 89723504 - MGP_NODShiLtJ_P0030953 Gm17268 protein_coding protein_coding MGP_NODShiLtJ_T0012522.1 MGP_NODShiLtJ_G0010630.1 mouse_genomes_project 11 69109995 69110228 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003114.1 MGP_NODShiLtJ_G0002889.1 mouse_genomes_project 11 59302103 59316031 - Gm12224 antisense antisense MGP_NODShiLtJ_T0003115.1 MGP_NODShiLtJ_G0002889.1 mouse_genomes_project 11 59306356 59315982 - Gm12224 antisense antisense MGP_NODShiLtJ_T0099933.1 MGP_NODShiLtJ_G0038327.1 mouse_genomes_project 11 68595605 68595746 + Gm24151 snoRNA snoRNA MGP_NODShiLtJ_T0012565.1 MGP_NODShiLtJ_G0010673.1 mouse_genomes_project 11 86950914 86951390 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098257.1 MGP_NODShiLtJ_G0036668.1 mouse_genomes_project 11 88130358 88132060 - C030013C21Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0017117.1 MGP_NODShiLtJ_G0015069.1 mouse_genomes_project 11 106501041 106541481 + D030028A08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017118.1 MGP_NODShiLtJ_G0015069.1 mouse_genomes_project 11 106531182 106555367 + D030028A08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017119.1 MGP_NODShiLtJ_G0015069.1 mouse_genomes_project 11 106531206 106550367 + D030028A08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017120.1 MGP_NODShiLtJ_G0015069.1 mouse_genomes_project 11 106531329 106554202 + D030028A08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0028557.1 MGP_NODShiLtJ_G0018078.1 mouse_genomes_project 11 53712791 53714153 + MGP_NODShiLtJ_P0028557 protein_coding protein_coding MGP_NODShiLtJ_T0033310.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127555674 127592064 + MGP_NODShiLtJ_P0033310 Llgl2 protein_coding protein_coding MGP_NODShiLtJ_T0033311.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127555683 127578465 + MGP_NODShiLtJ_P0033311 Llgl2 protein_coding protein_coding MGP_NODShiLtJ_T0033312.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127555683 127592062 + MGP_NODShiLtJ_P0033312 Llgl2 protein_coding protein_coding MGP_NODShiLtJ_T0033313.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127563646 127577907 + MGP_NODShiLtJ_P0033313 Llgl2 protein_coding protein_coding MGP_NODShiLtJ_T0033314.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127565603 127578412 + MGP_NODShiLtJ_P0033314 Llgl2 protein_coding protein_coding MGP_NODShiLtJ_T0033315.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127565992 127578472 + MGP_NODShiLtJ_P0033315 Llgl2 protein_coding protein_coding MGP_NODShiLtJ_T0033316.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127566001 127578500 + MGP_NODShiLtJ_P0033316 Llgl2 protein_coding protein_coding MGP_NODShiLtJ_T0033317.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127589535 127590603 + Llgl2 protein_coding retained_intron MGP_NODShiLtJ_T0033318.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127590019 127591142 + Llgl2 protein_coding processed_transcript MGP_NODShiLtJ_T0033319.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127590086 127592064 + MGP_NODShiLtJ_P0033319 Llgl2 protein_coding protein_coding MGP_NODShiLtJ_T0033320.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127590515 127591868 + Llgl2 protein_coding retained_intron MGP_NODShiLtJ_T0033321.1 MGP_NODShiLtJ_G0019259.1 mouse_genomes_project 11 127591316 127592064 + Llgl2 protein_coding retained_intron MGP_NODShiLtJ_T0033918.1 MGP_NODShiLtJ_G0019376.1 mouse_genomes_project 11 132786737 132788865 - MGP_NODShiLtJ_P0033918 Myadml2 protein_coding protein_coding MGP_NODShiLtJ_T0033919.1 MGP_NODShiLtJ_G0019376.1 mouse_genomes_project 11 132786738 132787789 - Myadml2 protein_coding processed_transcript MGP_NODShiLtJ_T0033784.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132189500 132241911 - MGP_NODShiLtJ_P0033784 Slc38a10 protein_coding protein_coding MGP_NODShiLtJ_T0033785.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132189981 132241643 - MGP_NODShiLtJ_P0033785 Slc38a10 protein_coding protein_coding MGP_NODShiLtJ_T0033786.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132191161 132192529 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033787.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132191218 132194129 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033788.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132191332 132195987 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033789.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132191345 132195999 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033790.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132191413 132195868 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033791.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132194077 132195879 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033792.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132196544 132241844 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033793.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132204412 132241911 - MGP_NODShiLtJ_P0033793 Slc38a10 protein_coding protein_coding MGP_NODShiLtJ_T0033794.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132209384 132241911 - MGP_NODShiLtJ_P0033794 Slc38a10 protein_coding protein_coding MGP_NODShiLtJ_T0033795.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132221043 132241885 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033796.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132223492 132241852 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033797.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132226655 132241887 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033798.1 MGP_NODShiLtJ_G0019349.1 mouse_genomes_project 11 132227794 132231470 - Slc38a10 protein_coding processed_transcript MGP_NODShiLtJ_T0030341.1 MGP_NODShiLtJ_G0018514.1 mouse_genomes_project 11 80263162 80265412 - MGP_NODShiLtJ_P0030341 Olfr380 protein_coding protein_coding MGP_NODShiLtJ_T0030342.1 MGP_NODShiLtJ_G0018514.1 mouse_genomes_project 11 80263162 80274021 - MGP_NODShiLtJ_P0030342 Olfr380 protein_coding protein_coding MGP_NODShiLtJ_T0030239.1 MGP_NODShiLtJ_G0018485.1 mouse_genomes_project 11 79064351 79082578 - MGP_NODShiLtJ_P0030239 Tekt1 protein_coding protein_coding MGP_NODShiLtJ_T0030240.1 MGP_NODShiLtJ_G0018485.1 mouse_genomes_project 11 79064351 79082001 - MGP_NODShiLtJ_P0030240 Tekt1 protein_coding protein_coding MGP_NODShiLtJ_T0030241.1 MGP_NODShiLtJ_G0018485.1 mouse_genomes_project 11 79064358 79083147 - MGP_NODShiLtJ_P0030241 Tekt1 protein_coding protein_coding MGP_NODShiLtJ_T0033211.1 MGP_NODShiLtJ_G0019243.1 mouse_genomes_project 11 127112441 127125718 + MGP_NODShiLtJ_P0033211 Kctd2 protein_coding protein_coding MGP_NODShiLtJ_T0033212.1 MGP_NODShiLtJ_G0019243.1 mouse_genomes_project 11 127112798 127123923 + MGP_NODShiLtJ_P0033212 Kctd2 protein_coding protein_coding MGP_NODShiLtJ_T0033213.1 MGP_NODShiLtJ_G0019243.1 mouse_genomes_project 11 127112830 127122690 + MGP_NODShiLtJ_P0033213 Kctd2 protein_coding protein_coding MGP_NODShiLtJ_T0033214.1 MGP_NODShiLtJ_G0019243.1 mouse_genomes_project 11 127112960 127115078 + Kctd2 protein_coding retained_intron MGP_NODShiLtJ_T0033215.1 MGP_NODShiLtJ_G0019243.1 mouse_genomes_project 11 127122001 127122850 + Kctd2 protein_coding processed_transcript MGP_NODShiLtJ_T0033853.1 MGP_NODShiLtJ_G0019362.1 mouse_genomes_project 11 132613073 132617526 + MGP_NODShiLtJ_P0033853 Mrpl12 protein_coding protein_coding MGP_NODShiLtJ_T0033854.1 MGP_NODShiLtJ_G0019362.1 mouse_genomes_project 11 132613487 132616918 + Mrpl12 protein_coding processed_transcript MGP_NODShiLtJ_T0009659.1 MGP_NODShiLtJ_G0007792.1 mouse_genomes_project 11 111544738 111544805 - Mir6929 miRNA miRNA MGP_NODShiLtJ_T0029384.1 MGP_NODShiLtJ_G0018301.1 mouse_genomes_project 11 68002750 68026389 + MGP_NODShiLtJ_P0029384 Adora2b protein_coding protein_coding MGP_NODShiLtJ_T0101571.1 MGP_NODShiLtJ_G0039741.1 mouse_genomes_project 11 109844269 109844472 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012441.1 MGP_NODShiLtJ_G0010549.1 mouse_genomes_project 11 35285270 35285809 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028085.1 MGP_NODShiLtJ_G0017954.1 mouse_genomes_project 11 26877454 26961279 + MGP_NODShiLtJ_P0028085 Fancl protein_coding protein_coding MGP_NODShiLtJ_T0028086.1 MGP_NODShiLtJ_G0017954.1 mouse_genomes_project 11 26878523 26958529 + Fancl protein_coding processed_transcript MGP_NODShiLtJ_T0028087.1 MGP_NODShiLtJ_G0017954.1 mouse_genomes_project 11 26878523 26915128 + MGP_NODShiLtJ_P0028087 Fancl protein_coding protein_coding MGP_NODShiLtJ_T0028088.1 MGP_NODShiLtJ_G0017954.1 mouse_genomes_project 11 26878523 26960824 + MGP_NODShiLtJ_P0028088 Fancl protein_coding protein_coding MGP_NODShiLtJ_T0028089.1 MGP_NODShiLtJ_G0017954.1 mouse_genomes_project 11 26957739 26960833 + MGP_NODShiLtJ_P0028089 Fancl protein_coding protein_coding MGP_NODShiLtJ_T0098663.1 MGP_NODShiLtJ_G0037057.1 mouse_genomes_project 11 2280565 2280672 + Gm25142 snRNA snRNA MGP_NODShiLtJ_T0033924.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814294 132815666 + Aspscr1 protein_coding retained_intron MGP_NODShiLtJ_T0033925.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814347 132817276 + Aspscr1 protein_coding retained_intron MGP_NODShiLtJ_T0033926.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814384 132845058 + MGP_NODShiLtJ_P0033926 Aspscr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033927.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814390 132853455 + MGP_NODShiLtJ_P0033927 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033928.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814404 132853077 + MGP_NODShiLtJ_P0033928 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033929.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814419 132831974 + MGP_NODShiLtJ_P0033929 Aspscr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033930.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814680 132832077 + MGP_NODShiLtJ_P0033930 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033931.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814695 132832073 + MGP_NODShiLtJ_P0033931 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033932.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814695 132819747 + MGP_NODShiLtJ_P0033932 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033933.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814713 132832033 + MGP_NODShiLtJ_P0033933 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033934.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132814725 132829529 + MGP_NODShiLtJ_P0033934 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033935.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132817954 132853447 + MGP_NODShiLtJ_P0033935 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033936.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132818519 132819739 + MGP_NODShiLtJ_P0033936 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033937.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132818632 132832203 + MGP_NODShiLtJ_P0033937 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033938.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132829520 132853448 + MGP_NODShiLtJ_P0033938 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033939.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132832179 132853448 + MGP_NODShiLtJ_P0033939 Aspscr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033940.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132832215 132853246 + MGP_NODShiLtJ_P0033940 Aspscr1 protein_coding protein_coding MGP_NODShiLtJ_T0033941.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132846007 132853449 + MGP_NODShiLtJ_P0033941 Aspscr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033942.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132852662 132853447 + Aspscr1 protein_coding retained_intron MGP_NODShiLtJ_T0033943.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132852764 132853452 + Aspscr1 protein_coding retained_intron MGP_NODShiLtJ_T0033944.1 MGP_NODShiLtJ_G0019378.1 mouse_genomes_project 11 132852862 132853450 + Aspscr1 protein_coding retained_intron MGP_NODShiLtJ_T0003301.1 MGP_NODShiLtJ_G0003038.1 mouse_genomes_project 11 129706155 129707884 - Gm11723 antisense antisense MGP_NODShiLtJ_T0011192.1 MGP_NODShiLtJ_G0009325.1 mouse_genomes_project 11 65653394 65653521 + Gm27511 misc_RNA misc_RNA MGP_NODShiLtJ_T0000825.1 MGP_NODShiLtJ_G0000755.1 mouse_genomes_project 11 33350145 33350520 + TEC TEC MGP_NODShiLtJ_T0031414.1 MGP_NODShiLtJ_G0018793.1 mouse_genomes_project 11 102227789 102229627 + Car10 protein_coding processed_transcript MGP_NODShiLtJ_T0031415.1 MGP_NODShiLtJ_G0018793.1 mouse_genomes_project 11 102228165 102658963 + MGP_NODShiLtJ_P0031415 Car10 protein_coding protein_coding MGP_NODShiLtJ_T0031416.1 MGP_NODShiLtJ_G0018793.1 mouse_genomes_project 11 102228165 102531244 + MGP_NODShiLtJ_P0031416 Car10 protein_coding protein_coding MGP_NODShiLtJ_T0031417.1 MGP_NODShiLtJ_G0018793.1 mouse_genomes_project 11 102228165 102777216 + MGP_NODShiLtJ_P0031417 Car10 protein_coding protein_coding MGP_NODShiLtJ_T0031418.1 MGP_NODShiLtJ_G0018793.1 mouse_genomes_project 11 102228175 102776745 + MGP_NODShiLtJ_P0031418 Car10 protein_coding protein_coding MGP_NODShiLtJ_T0031419.1 MGP_NODShiLtJ_G0018793.1 mouse_genomes_project 11 102229050 102320871 + MGP_NODShiLtJ_P0031419 Car10 protein_coding protein_coding MGP_NODShiLtJ_T0031420.1 MGP_NODShiLtJ_G0018793.1 mouse_genomes_project 11 102229050 102777220 + MGP_NODShiLtJ_P0031420 Car10 protein_coding protein_coding MGP_NODShiLtJ_T0033920.1 MGP_NODShiLtJ_G0019377.1 mouse_genomes_project 11 132794538 132801345 - MGP_NODShiLtJ_P0033920 Notum protein_coding protein_coding MGP_NODShiLtJ_T0033921.1 MGP_NODShiLtJ_G0019377.1 mouse_genomes_project 11 132794538 132801568 - MGP_NODShiLtJ_P0033921 Notum protein_coding protein_coding MGP_NODShiLtJ_T0033922.1 MGP_NODShiLtJ_G0019377.1 mouse_genomes_project 11 132794595 132798783 - Notum protein_coding retained_intron MGP_NODShiLtJ_T0033923.1 MGP_NODShiLtJ_G0019377.1 mouse_genomes_project 11 132798301 132801914 - MGP_NODShiLtJ_P0033923 Notum protein_coding protein_coding MGP_NODShiLtJ_T0033084.1 MGP_NODShiLtJ_G0019210.1 mouse_genomes_project 11 125231635 125533529 - MGP_NODShiLtJ_P0033084 Sdk2 protein_coding protein_coding MGP_NODShiLtJ_T0033085.1 MGP_NODShiLtJ_G0019210.1 mouse_genomes_project 11 125249103 125269543 - Sdk2 protein_coding processed_transcript MGP_NODShiLtJ_T0033086.1 MGP_NODShiLtJ_G0019210.1 mouse_genomes_project 11 125262468 125287330 - Sdk2 protein_coding processed_transcript MGP_NODShiLtJ_T0033087.1 MGP_NODShiLtJ_G0019210.1 mouse_genomes_project 11 125313773 125533286 - MGP_NODShiLtJ_P0033087 Sdk2 protein_coding protein_coding MGP_NODShiLtJ_T0033088.1 MGP_NODShiLtJ_G0019210.1 mouse_genomes_project 11 125330801 125534357 - Sdk2 protein_coding processed_transcript MGP_NODShiLtJ_T0033089.1 MGP_NODShiLtJ_G0019210.1 mouse_genomes_project 11 125406527 125534340 - Sdk2 protein_coding processed_transcript MGP_NODShiLtJ_T0030848.1 MGP_NODShiLtJ_G0018643.1 mouse_genomes_project 11 86736234 86751138 - MGP_NODShiLtJ_P0030848 Wsb1 protein_coding protein_coding MGP_NODShiLtJ_T0030849.1 MGP_NODShiLtJ_G0018643.1 mouse_genomes_project 11 86736250 86739731 - Wsb1 protein_coding retained_intron MGP_NODShiLtJ_T0030850.1 MGP_NODShiLtJ_G0018643.1 mouse_genomes_project 11 86737138 86745366 - MGP_NODShiLtJ_P0030850 Wsb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030851.1 MGP_NODShiLtJ_G0018643.1 mouse_genomes_project 11 86737169 86739656 - Wsb1 protein_coding processed_transcript MGP_NODShiLtJ_T0030852.1 MGP_NODShiLtJ_G0018643.1 mouse_genomes_project 11 86739994 86751136 - MGP_NODShiLtJ_P0030852 Wsb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030853.1 MGP_NODShiLtJ_G0018643.1 mouse_genomes_project 11 86740106 86750937 - MGP_NODShiLtJ_P0030853 Wsb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030854.1 MGP_NODShiLtJ_G0018643.1 mouse_genomes_project 11 86740814 86747491 - Wsb1 protein_coding retained_intron MGP_NODShiLtJ_T0012556.1 MGP_NODShiLtJ_G0010664.1 mouse_genomes_project 11 84886797 84887745 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030612.1 MGP_NODShiLtJ_G0018591.1 mouse_genomes_project 11 84326079 84367048 - MGP_NODShiLtJ_P0030612 Nsrp1 protein_coding protein_coding MGP_NODShiLtJ_T0030613.1 MGP_NODShiLtJ_G0018591.1 mouse_genomes_project 11 84333372 84366650 - MGP_NODShiLtJ_P0030613 Nsrp1 protein_coding protein_coding MGP_NODShiLtJ_T0030614.1 MGP_NODShiLtJ_G0018591.1 mouse_genomes_project 11 84337231 84367048 - Nsrp1 protein_coding processed_transcript MGP_NODShiLtJ_T0099930.1 MGP_NODShiLtJ_G0038324.1 mouse_genomes_project 11 68407151 68407223 + Snord49b snoRNA snoRNA MGP_NODShiLtJ_T0017079.1 MGP_NODShiLtJ_G0015049.1 mouse_genomes_project 11 73185988 73196356 + Gm12299 processed_transcript processed_transcript MGP_NODShiLtJ_T0033182.1 MGP_NODShiLtJ_G0019238.1 mouse_genomes_project 11 127015217 127028568 + MGP_NODShiLtJ_P0033182 Otop3 protein_coding protein_coding MGP_NODShiLtJ_T0033183.1 MGP_NODShiLtJ_G0019238.1 mouse_genomes_project 11 127015220 127028567 + MGP_NODShiLtJ_P0033183 Otop3 protein_coding protein_coding MGP_NODShiLtJ_T0017108.1 MGP_NODShiLtJ_G0015064.1 mouse_genomes_project 11 103351148 103377677 + B230206L02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017109.1 MGP_NODShiLtJ_G0015064.1 mouse_genomes_project 11 103351165 103377677 + B230206L02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017110.1 MGP_NODShiLtJ_G0015064.1 mouse_genomes_project 11 103353323 103356509 + B230206L02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0030361.1 MGP_NODShiLtJ_G0018527.1 mouse_genomes_project 11 80857305 80858355 + MGP_NODShiLtJ_P0030361 Olfr23 protein_coding protein_coding MGP_NODShiLtJ_T0028972.1 MGP_NODShiLtJ_G0018188.1 mouse_genomes_project 11 62211996 62547823 + MGP_NODShiLtJ_P0028972 Gria1 protein_coding protein_coding MGP_NODShiLtJ_T0028973.1 MGP_NODShiLtJ_G0018188.1 mouse_genomes_project 11 62212142 62547822 + MGP_NODShiLtJ_P0028973 Gria1 protein_coding protein_coding MGP_NODShiLtJ_T0028974.1 MGP_NODShiLtJ_G0018188.1 mouse_genomes_project 11 62212220 62545216 + MGP_NODShiLtJ_P0028974 Gria1 protein_coding protein_coding MGP_NODShiLtJ_T0028975.1 MGP_NODShiLtJ_G0018188.1 mouse_genomes_project 11 62390178 62404245 + Gria1 protein_coding processed_transcript MGP_NODShiLtJ_T0034022.1 MGP_NODShiLtJ_G0019394.1 mouse_genomes_project 11 133308642 133311105 + MGP_NODShiLtJ_P0034022 Tex19.2 protein_coding protein_coding MGP_NODShiLtJ_T0032318.1 MGP_NODShiLtJ_G0019049.1 mouse_genomes_project 11 111428985 111437837 + MGP_NODShiLtJ_P0032318 Aoc3 protein_coding protein_coding MGP_NODShiLtJ_T0032319.1 MGP_NODShiLtJ_G0019049.1 mouse_genomes_project 11 111429449 111440254 + MGP_NODShiLtJ_P0032319 Aoc3 protein_coding protein_coding MGP_NODShiLtJ_T0028665.1 MGP_NODShiLtJ_G0018108.1 mouse_genomes_project 11 55453885 55465979 - MGP_NODShiLtJ_P0028665 Zfp2 protein_coding protein_coding MGP_NODShiLtJ_T0028666.1 MGP_NODShiLtJ_G0018108.1 mouse_genomes_project 11 55453885 55471310 - MGP_NODShiLtJ_P0028666 Zfp2 protein_coding protein_coding MGP_NODShiLtJ_T0028667.1 MGP_NODShiLtJ_G0018108.1 mouse_genomes_project 11 55454232 55471333 - MGP_NODShiLtJ_P0028667 Zfp2 protein_coding protein_coding MGP_NODShiLtJ_T0028668.1 MGP_NODShiLtJ_G0018108.1 mouse_genomes_project 11 55456420 55471299 - Zfp2 protein_coding processed_transcript MGP_NODShiLtJ_T0028669.1 MGP_NODShiLtJ_G0018108.1 mouse_genomes_project 11 55460348 55471320 - Zfp2 protein_coding processed_transcript MGP_NODShiLtJ_T0028670.1 MGP_NODShiLtJ_G0018108.1 mouse_genomes_project 11 55461154 55471302 - Zfp2 protein_coding processed_transcript MGP_NODShiLtJ_T0009678.1 MGP_NODShiLtJ_G0007811.1 mouse_genomes_project 11 130855195 130855261 - Gm25040 miRNA miRNA MGP_NODShiLtJ_T0032905.1 MGP_NODShiLtJ_G0019170.1 mouse_genomes_project 11 117727945 117831338 - MGP_NODShiLtJ_P0032905 Bptf protein_coding protein_coding MGP_NODShiLtJ_T0032906.1 MGP_NODShiLtJ_G0019170.1 mouse_genomes_project 11 117727947 117831350 - MGP_NODShiLtJ_P0032906 Bptf protein_coding protein_coding MGP_NODShiLtJ_T0032907.1 MGP_NODShiLtJ_G0019170.1 mouse_genomes_project 11 117727947 117831350 - MGP_NODShiLtJ_P0032907 Bptf protein_coding protein_coding MGP_NODShiLtJ_T0032908.1 MGP_NODShiLtJ_G0019170.1 mouse_genomes_project 11 117731250 117739732 - Bptf protein_coding processed_transcript MGP_NODShiLtJ_T0032909.1 MGP_NODShiLtJ_G0019170.1 mouse_genomes_project 11 117731545 117831012 - MGP_NODShiLtJ_P0032909 Bptf protein_coding unknown_likely_coding MGP_NODShiLtJ_T0032910.1 MGP_NODShiLtJ_G0019170.1 mouse_genomes_project 11 117739075 117743311 - Bptf protein_coding processed_transcript MGP_NODShiLtJ_T0032911.1 MGP_NODShiLtJ_G0019170.1 mouse_genomes_project 11 117742701 117747574 - MGP_NODShiLtJ_P0032911 Bptf protein_coding protein_coding MGP_NODShiLtJ_T0032912.1 MGP_NODShiLtJ_G0019170.1 mouse_genomes_project 11 117755109 117762936 - MGP_NODShiLtJ_P0032912 Bptf protein_coding protein_coding MGP_NODShiLtJ_T0017125.1 MGP_NODShiLtJ_G0015073.1 mouse_genomes_project 11 107284800 107304575 - Gm11613 processed_transcript processed_transcript MGP_NODShiLtJ_T0028181.1 MGP_NODShiLtJ_G0017973.1 mouse_genomes_project 11 32460113 32468453 + MGP_NODShiLtJ_P0028181 Gpr75 protein_coding protein_coding MGP_NODShiLtJ_T0006165.1 MGP_NODShiLtJ_G0005146.1 mouse_genomes_project 11 48985243 48999828 - Gm12159 lincRNA lincRNA MGP_NODShiLtJ_T0029288.1 MGP_NODShiLtJ_G0018286.1 mouse_genomes_project 11 66882257 66930779 - MGP_NODShiLtJ_P0029288 Aldh3a2 protein_coding protein_coding MGP_NODShiLtJ_T0029289.1 MGP_NODShiLtJ_G0018286.1 mouse_genomes_project 11 66907264 66930600 - MGP_NODShiLtJ_P0029289 Aldh3a2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029290.1 MGP_NODShiLtJ_G0018286.1 mouse_genomes_project 11 66907273 66930779 - MGP_NODShiLtJ_P0029290 Aldh3a2 protein_coding protein_coding MGP_NODShiLtJ_T0029291.1 MGP_NODShiLtJ_G0018286.1 mouse_genomes_project 11 66910317 66930779 - MGP_NODShiLtJ_P0029291 Aldh3a2 protein_coding protein_coding MGP_NODShiLtJ_T0029292.1 MGP_NODShiLtJ_G0018286.1 mouse_genomes_project 11 66911862 66925929 - Aldh3a2 protein_coding processed_transcript MGP_NODShiLtJ_T0029293.1 MGP_NODShiLtJ_G0018286.1 mouse_genomes_project 11 66919625 66931058 - Aldh3a2 protein_coding processed_transcript MGP_NODShiLtJ_T0029294.1 MGP_NODShiLtJ_G0018286.1 mouse_genomes_project 11 66927763 66930721 - Aldh3a2 protein_coding processed_transcript MGP_NODShiLtJ_T0029295.1 MGP_NODShiLtJ_G0018286.1 mouse_genomes_project 11 66928817 66931035 - Aldh3a2 protein_coding processed_transcript MGP_NODShiLtJ_T0031001.1 MGP_NODShiLtJ_G0018684.1 mouse_genomes_project 11 90667867 90703666 + MGP_NODShiLtJ_P0031001 Unc45b protein_coding protein_coding MGP_NODShiLtJ_T0031002.1 MGP_NODShiLtJ_G0018684.1 mouse_genomes_project 11 90668570 90703666 + MGP_NODShiLtJ_P0031002 Unc45b protein_coding protein_coding MGP_NODShiLtJ_T0031003.1 MGP_NODShiLtJ_G0018684.1 mouse_genomes_project 11 90668570 90703666 + MGP_NODShiLtJ_P0031003 Unc45b protein_coding protein_coding MGP_NODShiLtJ_T0031004.1 MGP_NODShiLtJ_G0018684.1 mouse_genomes_project 11 90690344 90691131 + Unc45b protein_coding processed_transcript MGP_NODShiLtJ_T0031005.1 MGP_NODShiLtJ_G0018684.1 mouse_genomes_project 11 90693811 90698020 + Unc45b protein_coding processed_transcript MGP_NODShiLtJ_T0032786.1 MGP_NODShiLtJ_G0019141.1 mouse_genomes_project 11 116570950 116598788 + MGP_NODShiLtJ_P0032786 Ace protein_coding protein_coding MGP_NODShiLtJ_T0032787.1 MGP_NODShiLtJ_G0019141.1 mouse_genomes_project 11 116574324 116598084 + MGP_NODShiLtJ_P0032787 Ace protein_coding protein_coding MGP_NODShiLtJ_T0032788.1 MGP_NODShiLtJ_G0019141.1 mouse_genomes_project 11 116578206 116598077 + MGP_NODShiLtJ_P0032788 Ace protein_coding protein_coding MGP_NODShiLtJ_T0032789.1 MGP_NODShiLtJ_G0019141.1 mouse_genomes_project 11 116579601 116593937 + Ace protein_coding processed_transcript MGP_NODShiLtJ_T0031328.1 MGP_NODShiLtJ_G0018768.1 mouse_genomes_project 11 96301528 96310322 - MGP_NODShiLtJ_P0031328 Dynll2 protein_coding protein_coding MGP_NODShiLtJ_T0031329.1 MGP_NODShiLtJ_G0018768.1 mouse_genomes_project 11 96301528 96306009 - MGP_NODShiLtJ_P0031329 Dynll2 protein_coding protein_coding MGP_NODShiLtJ_T0031330.1 MGP_NODShiLtJ_G0018768.1 mouse_genomes_project 11 96301528 96308567 - MGP_NODShiLtJ_P0031330 Dynll2 protein_coding protein_coding MGP_NODShiLtJ_T0031331.1 MGP_NODShiLtJ_G0018768.1 mouse_genomes_project 11 96302160 96310145 - MGP_NODShiLtJ_P0031331 Dynll2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027522.1 MGP_NODShiLtJ_G0017825.1 mouse_genomes_project 11 837454 884847 - MGP_NODShiLtJ_P0027522 4930556J24Rik protein_coding protein_coding MGP_NODShiLtJ_T0017047.1 MGP_NODShiLtJ_G0015030.1 mouse_genomes_project 11 23627464 23629921 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017048.1 MGP_NODShiLtJ_G0015030.1 mouse_genomes_project 11 23627468 23630937 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017049.1 MGP_NODShiLtJ_G0015030.1 mouse_genomes_project 11 23627494 23630468 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017050.1 MGP_NODShiLtJ_G0015030.1 mouse_genomes_project 11 23630126 23630920 + processed_transcript processed_transcript MGP_NODShiLtJ_T0032433.1 MGP_NODShiLtJ_G0019074.1 mouse_genomes_project 11 112322795 112323942 - MGP_NODShiLtJ_P0032433 Pyy protein_coding protein_coding MGP_NODShiLtJ_T0032434.1 MGP_NODShiLtJ_G0019074.1 mouse_genomes_project 11 112322795 112323952 - MGP_NODShiLtJ_P0032434 Pyy protein_coding protein_coding MGP_NODShiLtJ_T0032435.1 MGP_NODShiLtJ_G0019074.1 mouse_genomes_project 11 112322799 112323536 - MGP_NODShiLtJ_P0032435 Pyy protein_coding protein_coding MGP_NODShiLtJ_T0032436.1 MGP_NODShiLtJ_G0019074.1 mouse_genomes_project 11 112323080 112323952 - Pyy protein_coding retained_intron MGP_NODShiLtJ_T0012419.1 MGP_NODShiLtJ_G0010527.1 mouse_genomes_project 11 30668280 30669220 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027827.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6623232 6642081 + MGP_NODShiLtJ_P0027827 Upp1 protein_coding protein_coding MGP_NODShiLtJ_T0027828.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6623236 6642087 + MGP_NODShiLtJ_P0027828 Upp1 protein_coding protein_coding MGP_NODShiLtJ_T0027829.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6623374 6640646 + MGP_NODShiLtJ_P0027829 Upp1 protein_coding protein_coding MGP_NODShiLtJ_T0027830.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6623636 6642084 + MGP_NODShiLtJ_P0027830 Upp1 protein_coding protein_coding MGP_NODShiLtJ_T0027831.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6623677 6639239 + MGP_NODShiLtJ_P0027831 Upp1 protein_coding protein_coding MGP_NODShiLtJ_T0027832.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6623756 6624803 + Upp1 protein_coding retained_intron MGP_NODShiLtJ_T0027833.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6623916 6639168 + MGP_NODShiLtJ_P0027833 Upp1 protein_coding protein_coding MGP_NODShiLtJ_T0027834.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6630804 6640666 + MGP_NODShiLtJ_P0027834 Upp1 protein_coding protein_coding MGP_NODShiLtJ_T0027835.1 MGP_NODShiLtJ_G0017897.1 mouse_genomes_project 11 6638931 6641999 + Upp1 protein_coding retained_intron MGP_NODShiLtJ_T0027653.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2118789 2125952 + MGP_NODShiLtJ_P0027653 Rhbdd3 protein_coding protein_coding MGP_NODShiLtJ_T0027654.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2118940 2120451 + Rhbdd3 protein_coding processed_transcript MGP_NODShiLtJ_T0027655.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2119136 2120371 + Rhbdd3 protein_coding processed_transcript MGP_NODShiLtJ_T0027656.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2119296 2123210 + MGP_NODShiLtJ_P0027656 Rhbdd3 protein_coding protein_coding MGP_NODShiLtJ_T0027657.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2119302 2125952 + MGP_NODShiLtJ_P0027657 Rhbdd3 protein_coding protein_coding MGP_NODShiLtJ_T0027658.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2119339 2123115 + MGP_NODShiLtJ_P0027658 Rhbdd3 protein_coding protein_coding MGP_NODShiLtJ_T0027659.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2119471 2123121 + MGP_NODShiLtJ_P0027659 Rhbdd3 protein_coding protein_coding MGP_NODShiLtJ_T0027660.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2120020 2125952 + MGP_NODShiLtJ_P0027660 Rhbdd3 protein_coding protein_coding MGP_NODShiLtJ_T0027661.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2120033 2125089 + MGP_NODShiLtJ_P0027661 Rhbdd3 protein_coding protein_coding MGP_NODShiLtJ_T0027662.1 MGP_NODShiLtJ_G0017854.1 mouse_genomes_project 11 2120100 2125954 + Rhbdd3 protein_coding processed_transcript MGP_NODShiLtJ_T0003111.1 MGP_NODShiLtJ_G0002886.1 mouse_genomes_project 11 58341808 58343045 - Gm12212 antisense antisense MGP_NODShiLtJ_T0032963.1 MGP_NODShiLtJ_G0019181.1 mouse_genomes_project 11 119558783 119559745 - MGP_NODShiLtJ_P0032963 protein_coding protein_coding MGP_NODShiLtJ_T0028513.1 MGP_NODShiLtJ_G0018067.1 mouse_genomes_project 11 53366098 53388655 - MGP_NODShiLtJ_P0028513 Tgtp1 protein_coding protein_coding MGP_NODShiLtJ_T0099944.1 MGP_NODShiLtJ_G0038338.1 mouse_genomes_project 11 84556069 84556157 - Gm24989 snoRNA snoRNA MGP_NODShiLtJ_T0031911.1 MGP_NODShiLtJ_G0018913.1 mouse_genomes_project 11 108293035 108301529 + MGP_NODShiLtJ_P0031911 Zpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031912.1 MGP_NODShiLtJ_G0018913.1 mouse_genomes_project 11 108293068 108301529 + MGP_NODShiLtJ_P0031912 Zpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031913.1 MGP_NODShiLtJ_G0018913.1 mouse_genomes_project 11 108293088 108301520 + MGP_NODShiLtJ_P0031913 Zpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031914.1 MGP_NODShiLtJ_G0018913.1 mouse_genomes_project 11 108293090 108301520 + MGP_NODShiLtJ_P0031914 Zpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031915.1 MGP_NODShiLtJ_G0018913.1 mouse_genomes_project 11 108293116 108301397 + MGP_NODShiLtJ_P0031915 Zpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031916.1 MGP_NODShiLtJ_G0018913.1 mouse_genomes_project 11 108298306 108301249 + Zpbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0032614.1 MGP_NODShiLtJ_G0019104.1 mouse_genomes_project 11 113224484 113231909 - MGP_NODShiLtJ_P0032614 C1ql1 protein_coding protein_coding MGP_NODShiLtJ_T0006277.1 MGP_NODShiLtJ_G0005230.1 mouse_genomes_project 11 117658790 117659816 - Gm11707 lincRNA lincRNA MGP_NODShiLtJ_T0003254.1 MGP_NODShiLtJ_G0003001.1 mouse_genomes_project 11 113484436 113486627 - Gm20511 antisense antisense MGP_NODShiLtJ_T0033016.1 MGP_NODShiLtJ_G0019194.1 mouse_genomes_project 11 120908703 120980230 - MGP_NODShiLtJ_P0033016 Abca8b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033017.1 MGP_NODShiLtJ_G0019194.1 mouse_genomes_project 11 120908705 120980264 - MGP_NODShiLtJ_P0033017 Abca8b protein_coding protein_coding MGP_NODShiLtJ_T0033018.1 MGP_NODShiLtJ_G0019194.1 mouse_genomes_project 11 120910787 120980162 - MGP_NODShiLtJ_P0033018 Abca8b protein_coding protein_coding MGP_NODShiLtJ_T0101043.1 MGP_NODShiLtJ_G0039414.1 mouse_genomes_project 11 114979391 114980719 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0017017.1 MGP_NODShiLtJ_G0015017.1 mouse_genomes_project 11 301544 306268 + 8430429K09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017018.1 MGP_NODShiLtJ_G0015017.1 mouse_genomes_project 11 301616 306132 + 8430429K09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017019.1 MGP_NODShiLtJ_G0015017.1 mouse_genomes_project 11 301651 335209 + 8430429K09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017020.1 MGP_NODShiLtJ_G0015017.1 mouse_genomes_project 11 301651 307507 + 8430429K09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017021.1 MGP_NODShiLtJ_G0015017.1 mouse_genomes_project 11 301659 306185 + 8430429K09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0030354.1 MGP_NODShiLtJ_G0018522.1 mouse_genomes_project 11 80709051 80713361 - MGP_NODShiLtJ_P0030354 Olfr391-ps protein_coding protein_coding MGP_NODShiLtJ_T0032227.1 MGP_NODShiLtJ_G0019030.1 mouse_genomes_project 11 111136743 111138860 + MGP_NODShiLtJ_P0032227 Hsd17b1 protein_coding protein_coding MGP_NODShiLtJ_T0032224.1 MGP_NODShiLtJ_G0019029.1 mouse_genomes_project 11 111128346 111136005 + MGP_NODShiLtJ_P0032224 Naglu protein_coding protein_coding MGP_NODShiLtJ_T0032225.1 MGP_NODShiLtJ_G0019029.1 mouse_genomes_project 11 111129886 111134904 + Naglu protein_coding processed_transcript MGP_NODShiLtJ_T0032226.1 MGP_NODShiLtJ_G0019029.1 mouse_genomes_project 11 111130294 111135139 + Naglu protein_coding processed_transcript MGP_NODShiLtJ_T0101547.1 MGP_NODShiLtJ_G0039717.1 mouse_genomes_project 11 63944660 63945052 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0032888.1 MGP_NODShiLtJ_G0019167.1 mouse_genomes_project 11 117470242 117500513 + MGP_NODShiLtJ_P0032888 Cep95 protein_coding protein_coding MGP_NODShiLtJ_T0032889.1 MGP_NODShiLtJ_G0019167.1 mouse_genomes_project 11 117470265 117500506 + MGP_NODShiLtJ_P0032889 Cep95 protein_coding protein_coding MGP_NODShiLtJ_T0032890.1 MGP_NODShiLtJ_G0019167.1 mouse_genomes_project 11 117470277 117472259 + Cep95 protein_coding processed_transcript MGP_NODShiLtJ_T0032891.1 MGP_NODShiLtJ_G0019167.1 mouse_genomes_project 11 117494013 117495492 + Cep95 protein_coding processed_transcript MGP_NODShiLtJ_T0032892.1 MGP_NODShiLtJ_G0019167.1 mouse_genomes_project 11 117495875 117497431 + Cep95 protein_coding processed_transcript MGP_NODShiLtJ_T0032893.1 MGP_NODShiLtJ_G0019167.1 mouse_genomes_project 11 117499486 117500514 + Cep95 protein_coding processed_transcript MGP_NODShiLtJ_T0032894.1 MGP_NODShiLtJ_G0019167.1 mouse_genomes_project 11 117499531 117501583 + MGP_NODShiLtJ_P0032894 Cep95 protein_coding protein_coding MGP_NODShiLtJ_T0012418.1 MGP_NODShiLtJ_G0010526.1 mouse_genomes_project 11 30259680 30260523 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032811.1 MGP_NODShiLtJ_G0019150.1 mouse_genomes_project 11 116815776 116837109 - MGP_NODShiLtJ_P0032811 Ccdc47 protein_coding protein_coding MGP_NODShiLtJ_T0032812.1 MGP_NODShiLtJ_G0019150.1 mouse_genomes_project 11 116819468 116823120 - MGP_NODShiLtJ_P0032812 Ccdc47 protein_coding protein_coding MGP_NODShiLtJ_T0032813.1 MGP_NODShiLtJ_G0019150.1 mouse_genomes_project 11 116820307 116824127 - MGP_NODShiLtJ_P0032813 Ccdc47 protein_coding protein_coding MGP_NODShiLtJ_T0032814.1 MGP_NODShiLtJ_G0019150.1 mouse_genomes_project 11 116820696 116821597 - MGP_NODShiLtJ_P0032814 Ccdc47 protein_coding protein_coding MGP_NODShiLtJ_T0032815.1 MGP_NODShiLtJ_G0019150.1 mouse_genomes_project 11 116822984 116824234 - Ccdc47 protein_coding processed_transcript MGP_NODShiLtJ_T0032028.1 MGP_NODShiLtJ_G0018948.1 mouse_genomes_project 11 109424732 109425770 - MGP_NODShiLtJ_P0032028 protein_coding protein_coding MGP_NODShiLtJ_T0033855.1 MGP_NODShiLtJ_G0019363.1 mouse_genomes_project 11 132620300 132627649 + MGP_NODShiLtJ_P0033855 Slc25a10 protein_coding protein_coding MGP_NODShiLtJ_T0033856.1 MGP_NODShiLtJ_G0019363.1 mouse_genomes_project 11 132620348 132627055 + Slc25a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033857.1 MGP_NODShiLtJ_G0019363.1 mouse_genomes_project 11 132620369 132624375 + Slc25a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033858.1 MGP_NODShiLtJ_G0019363.1 mouse_genomes_project 11 132620375 132625378 + Slc25a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033859.1 MGP_NODShiLtJ_G0019363.1 mouse_genomes_project 11 132624560 132626425 + Slc25a10 protein_coding processed_transcript MGP_NODShiLtJ_T0033860.1 MGP_NODShiLtJ_G0019363.1 mouse_genomes_project 11 132626186 132626739 + Slc25a10 protein_coding processed_transcript MGP_NODShiLtJ_T0012387.1 MGP_NODShiLtJ_G0010495.1 mouse_genomes_project 11 19249830 19250662 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033203.1 MGP_NODShiLtJ_G0019242.1 mouse_genomes_project 11 127108333 127110667 - Atp5h protein_coding processed_transcript MGP_NODShiLtJ_T0033204.1 MGP_NODShiLtJ_G0019242.1 mouse_genomes_project 11 127108333 127109663 - Atp5h protein_coding processed_transcript MGP_NODShiLtJ_T0033205.1 MGP_NODShiLtJ_G0019242.1 mouse_genomes_project 11 127108333 127112611 - MGP_NODShiLtJ_P0033205 Atp5h protein_coding protein_coding MGP_NODShiLtJ_T0033206.1 MGP_NODShiLtJ_G0019242.1 mouse_genomes_project 11 127108333 127112566 - MGP_NODShiLtJ_P0033206 Atp5h protein_coding protein_coding MGP_NODShiLtJ_T0033207.1 MGP_NODShiLtJ_G0019242.1 mouse_genomes_project 11 127108333 127112611 - MGP_NODShiLtJ_P0033207 Atp5h protein_coding protein_coding MGP_NODShiLtJ_T0033208.1 MGP_NODShiLtJ_G0019242.1 mouse_genomes_project 11 127108392 127111152 - MGP_NODShiLtJ_P0033208 Atp5h protein_coding protein_coding MGP_NODShiLtJ_T0033209.1 MGP_NODShiLtJ_G0019242.1 mouse_genomes_project 11 127108462 127111386 - MGP_NODShiLtJ_P0033209 Atp5h protein_coding protein_coding MGP_NODShiLtJ_T0033210.1 MGP_NODShiLtJ_G0019242.1 mouse_genomes_project 11 127109497 127111718 - Atp5h protein_coding processed_transcript MGP_NODShiLtJ_T0029123.1 MGP_NODShiLtJ_G0018251.1 mouse_genomes_project 11 64998471 65018282 - MGP_NODShiLtJ_P0029123 Zkscan17 protein_coding protein_coding MGP_NODShiLtJ_T0029124.1 MGP_NODShiLtJ_G0018251.1 mouse_genomes_project 11 65012452 65019140 - Zkscan17 protein_coding processed_transcript MGP_NODShiLtJ_T0029125.1 MGP_NODShiLtJ_G0018251.1 mouse_genomes_project 11 65017079 65039540 - Zkscan17 protein_coding processed_transcript MGP_NODShiLtJ_T0029126.1 MGP_NODShiLtJ_G0018251.1 mouse_genomes_project 11 65017085 65019140 - Zkscan17 protein_coding processed_transcript MGP_NODShiLtJ_T0029127.1 MGP_NODShiLtJ_G0018251.1 mouse_genomes_project 11 65038360 65039660 - Zkscan17 protein_coding processed_transcript MGP_NODShiLtJ_T0012651.1 MGP_NODShiLtJ_G0010759.1 mouse_genomes_project 11 125116980 125117784 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012378.1 MGP_NODShiLtJ_G0010486.1 mouse_genomes_project 11 16959767 16960451 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098697.1 MGP_NODShiLtJ_G0037091.1 mouse_genomes_project 11 81837677 81837784 + Gm24211 snRNA snRNA MGP_NODShiLtJ_T0030896.1 MGP_NODShiLtJ_G0018655.1 mouse_genomes_project 11 87710389 87715882 - MGP_NODShiLtJ_P0030896 Tefm protein_coding protein_coding MGP_NODShiLtJ_T0030897.1 MGP_NODShiLtJ_G0018655.1 mouse_genomes_project 11 87710389 87713616 - MGP_NODShiLtJ_P0030897 Tefm protein_coding protein_coding MGP_NODShiLtJ_T0030898.1 MGP_NODShiLtJ_G0018655.1 mouse_genomes_project 11 87711657 87715850 - MGP_NODShiLtJ_P0030898 Tefm protein_coding protein_coding MGP_NODShiLtJ_T0031061.1 MGP_NODShiLtJ_G0018707.1 mouse_genomes_project 11 91594472 91596750 + MGP_NODShiLtJ_P0031061 Wfdc17 protein_coding protein_coding MGP_NODShiLtJ_T0030346.1 MGP_NODShiLtJ_G0018517.1 mouse_genomes_project 11 80419605 80420544 - MGP_NODShiLtJ_P0030346 Olfr385 protein_coding protein_coding MGP_NODShiLtJ_T0003223.1 MGP_NODShiLtJ_G0002976.1 mouse_genomes_project 11 105897179 105909712 - Hoxb3os antisense antisense MGP_NODShiLtJ_T0003224.1 MGP_NODShiLtJ_G0002976.1 mouse_genomes_project 11 105899591 105902034 - Hoxb3os antisense antisense MGP_NODShiLtJ_T0097892.1 MGP_NODShiLtJ_G0036304.1 mouse_genomes_project 11 63015520 63015639 + n-R5s69 rRNA rRNA MGP_NODShiLtJ_T0032333.1 MGP_NODShiLtJ_G0019054.1 mouse_genomes_project 11 111550632 111561127 + MGP_NODShiLtJ_P0032333 Rundc1 protein_coding protein_coding MGP_NODShiLtJ_T0029035.1 MGP_NODShiLtJ_G0018210.1 mouse_genomes_project 11 63889136 63889490 - MGP_NODShiLtJ_P0029035 protein_coding protein_coding MGP_NODShiLtJ_T0031066.1 MGP_NODShiLtJ_G0018710.1 mouse_genomes_project 11 91646712 91682021 + MGP_NODShiLtJ_P0031066 Heatr6 protein_coding protein_coding MGP_NODShiLtJ_T0031067.1 MGP_NODShiLtJ_G0018710.1 mouse_genomes_project 11 91646730 91679299 + Heatr6 protein_coding processed_transcript MGP_NODShiLtJ_T0031068.1 MGP_NODShiLtJ_G0018710.1 mouse_genomes_project 11 91647045 91649662 + Heatr6 protein_coding processed_transcript MGP_NODShiLtJ_T0031069.1 MGP_NODShiLtJ_G0018710.1 mouse_genomes_project 11 91654532 91659126 + Heatr6 protein_coding retained_intron MGP_NODShiLtJ_T0031070.1 MGP_NODShiLtJ_G0018710.1 mouse_genomes_project 11 91668264 91676195 + Heatr6 protein_coding processed_transcript MGP_NODShiLtJ_T0101038.1 MGP_NODShiLtJ_G0039412.1 mouse_genomes_project 11 1523814 1527202 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0031189.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94329890 94383867 - MGP_NODShiLtJ_P0031189 Ints2 protein_coding protein_coding MGP_NODShiLtJ_T0031190.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94331297 94382865 - MGP_NODShiLtJ_P0031190 Ints2 protein_coding protein_coding MGP_NODShiLtJ_T0031191.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94337769 94350211 - MGP_NODShiLtJ_P0031191 Ints2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031192.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94345920 94354353 - Ints2 protein_coding retained_intron MGP_NODShiLtJ_T0031193.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94356843 94383858 - Ints2 protein_coding retained_intron MGP_NODShiLtJ_T0031194.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94357783 94363690 - Ints2 protein_coding retained_intron MGP_NODShiLtJ_T0031195.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94377003 94383892 - MGP_NODShiLtJ_P0031195 Ints2 protein_coding protein_coding MGP_NODShiLtJ_T0031196.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94381678 94383871 - MGP_NODShiLtJ_P0031196 Ints2 protein_coding protein_coding MGP_NODShiLtJ_T0031197.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94382344 94383835 - MGP_NODShiLtJ_P0031197 Ints2 protein_coding protein_coding MGP_NODShiLtJ_T0031198.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94382671 94383659 - Ints2 protein_coding retained_intron MGP_NODShiLtJ_T0031199.1 MGP_NODShiLtJ_G0018736.1 mouse_genomes_project 11 94382761 94383882 - Ints2 protein_coding processed_transcript MGP_NODShiLtJ_T0032185.1 MGP_NODShiLtJ_G0019023.1 mouse_genomes_project 11 110787633 110792563 - MGP_NODShiLtJ_P0032185 Ghdc protein_coding protein_coding MGP_NODShiLtJ_T0032186.1 MGP_NODShiLtJ_G0019023.1 mouse_genomes_project 11 110788416 110790319 - Ghdc protein_coding processed_transcript MGP_NODShiLtJ_T0032187.1 MGP_NODShiLtJ_G0019023.1 mouse_genomes_project 11 110791297 110792548 - MGP_NODShiLtJ_P0032187 Ghdc protein_coding protein_coding MGP_NODShiLtJ_T0098707.1 MGP_NODShiLtJ_G0037101.1 mouse_genomes_project 11 93213506 93213613 + Gm23506 snRNA snRNA MGP_NODShiLtJ_T0031772.1 MGP_NODShiLtJ_G0018880.1 mouse_genomes_project 11 106990111 107027483 + MGP_NODShiLtJ_P0031772 Socs7 protein_coding protein_coding MGP_NODShiLtJ_T0031773.1 MGP_NODShiLtJ_G0018880.1 mouse_genomes_project 11 107005694 107006925 + Socs7 protein_coding processed_transcript MGP_NODShiLtJ_T0006192.1 MGP_NODShiLtJ_G0005171.1 mouse_genomes_project 11 70111642 70130307 + Gm12290 lincRNA lincRNA MGP_NODShiLtJ_T0012501.1 MGP_NODShiLtJ_G0010609.1 mouse_genomes_project 11 63745281 63746073 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032990.1 MGP_NODShiLtJ_G0019188.1 mouse_genomes_project 11 120393412 120417397 - MGP_NODShiLtJ_P0032990 Slc16a6 protein_coding protein_coding MGP_NODShiLtJ_T0032991.1 MGP_NODShiLtJ_G0019188.1 mouse_genomes_project 11 120394965 120417093 - MGP_NODShiLtJ_P0032991 Slc16a6 protein_coding protein_coding MGP_NODShiLtJ_T0032992.1 MGP_NODShiLtJ_G0019188.1 mouse_genomes_project 11 120403532 120416487 - MGP_NODShiLtJ_P0032992 Slc16a6 protein_coding protein_coding MGP_NODShiLtJ_T0032993.1 MGP_NODShiLtJ_G0019188.1 mouse_genomes_project 11 120410527 120416998 - Slc16a6 protein_coding processed_transcript MGP_NODShiLtJ_T0003309.1 MGP_NODShiLtJ_G0003046.1 mouse_genomes_project 11 132328040 132328929 - Gm11772 antisense antisense MGP_NODShiLtJ_T0012475.1 MGP_NODShiLtJ_G0010583.1 mouse_genomes_project 11 55693967 55695209 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029299.1 MGP_NODShiLtJ_G0018288.1 mouse_genomes_project 11 67012081 67057551 - MGP_NODShiLtJ_P0029299 Slc47a1 protein_coding protein_coding MGP_NODShiLtJ_T0029300.1 MGP_NODShiLtJ_G0018288.1 mouse_genomes_project 11 67012082 67057534 - MGP_NODShiLtJ_P0029300 Slc47a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029301.1 MGP_NODShiLtJ_G0018288.1 mouse_genomes_project 11 67041370 67045182 - Slc47a1 protein_coding processed_transcript MGP_NODShiLtJ_T0029302.1 MGP_NODShiLtJ_G0018288.1 mouse_genomes_project 11 67041547 67057815 - MGP_NODShiLtJ_P0029302 Slc47a1 protein_coding protein_coding MGP_NODShiLtJ_T0003072.1 MGP_NODShiLtJ_G0002852.1 mouse_genomes_project 11 9877440 9895929 + 1700042O10Rik antisense antisense MGP_NODShiLtJ_T0032443.1 MGP_NODShiLtJ_G0019077.1 mouse_genomes_project 11 112382698 112409076 - MGP_NODShiLtJ_P0032443 Lsm12 protein_coding protein_coding MGP_NODShiLtJ_T0032444.1 MGP_NODShiLtJ_G0019077.1 mouse_genomes_project 11 112384156 112409143 - MGP_NODShiLtJ_P0032444 Lsm12 protein_coding protein_coding MGP_NODShiLtJ_T0032445.1 MGP_NODShiLtJ_G0019077.1 mouse_genomes_project 11 112385449 112406847 - Lsm12 protein_coding processed_transcript MGP_NODShiLtJ_T0032446.1 MGP_NODShiLtJ_G0019077.1 mouse_genomes_project 11 112385613 112409104 - Lsm12 protein_coding processed_transcript MGP_NODShiLtJ_T0032447.1 MGP_NODShiLtJ_G0019077.1 mouse_genomes_project 11 112388638 112409108 - Lsm12 protein_coding processed_transcript MGP_NODShiLtJ_T0029488.1 MGP_NODShiLtJ_G0018325.1 mouse_genomes_project 11 71177716 71185941 - MGP_NODShiLtJ_P0029488 1700086D15Rik protein_coding protein_coding MGP_NODShiLtJ_T0029489.1 MGP_NODShiLtJ_G0018325.1 mouse_genomes_project 11 71177716 71185940 - MGP_NODShiLtJ_P0029489 1700086D15Rik protein_coding protein_coding MGP_NODShiLtJ_T0029077.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64453495 64621276 - MGP_NODShiLtJ_P0029077 protein_coding protein_coding MGP_NODShiLtJ_T0029078.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64453498 64497186 - MGP_NODShiLtJ_P0029078 protein_coding protein_coding MGP_NODShiLtJ_T0029079.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64453571 64469637 - MGP_NODShiLtJ_P0029079 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029080.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64453571 64469737 - MGP_NODShiLtJ_P0029080 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029081.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64470918 64621276 - MGP_NODShiLtJ_P0029081 protein_coding protein_coding MGP_NODShiLtJ_T0029082.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64470918 64621303 - MGP_NODShiLtJ_P0029082 protein_coding protein_coding MGP_NODShiLtJ_T0029083.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64470918 64497159 - MGP_NODShiLtJ_P0029083 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029084.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64470919 64491614 - MGP_NODShiLtJ_P0029084 protein_coding protein_coding MGP_NODShiLtJ_T0029085.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64471433 64621276 - MGP_NODShiLtJ_P0029085 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029086.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64471433 64621276 - MGP_NODShiLtJ_P0029086 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029087.1 MGP_NODShiLtJ_G0018238.1 mouse_genomes_project 11 64541708 64548309 - MGP_NODShiLtJ_P0029087 protein_coding protein_coding MGP_NODShiLtJ_T0031698.1 MGP_NODShiLtJ_G0018864.1 mouse_genomes_project 11 106428980 106430687 + Copz2 protein_coding retained_intron MGP_NODShiLtJ_T0031699.1 MGP_NODShiLtJ_G0018864.1 mouse_genomes_project 11 106428986 106440834 + MGP_NODShiLtJ_P0031699 Copz2 protein_coding protein_coding MGP_NODShiLtJ_T0031700.1 MGP_NODShiLtJ_G0018864.1 mouse_genomes_project 11 106428991 106433251 + MGP_NODShiLtJ_P0031700 Copz2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031701.1 MGP_NODShiLtJ_G0018864.1 mouse_genomes_project 11 106432997 106436035 + Copz2 protein_coding retained_intron MGP_NODShiLtJ_T0031702.1 MGP_NODShiLtJ_G0018864.1 mouse_genomes_project 11 106433228 106440834 + MGP_NODShiLtJ_P0031702 Copz2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031889.1 MGP_NODShiLtJ_G0018907.1 mouse_genomes_project 11 108118840 108120572 + MGP_NODShiLtJ_P0031889 Pnmt protein_coding protein_coding MGP_NODShiLtJ_T0031890.1 MGP_NODShiLtJ_G0018907.1 mouse_genomes_project 11 108119102 108119873 + Pnmt protein_coding processed_transcript MGP_NODShiLtJ_T0009638.1 MGP_NODShiLtJ_G0007771.1 mouse_genomes_project 11 96013757 96013872 - Mir142b miRNA miRNA MGP_NODShiLtJ_T0030080.1 MGP_NODShiLtJ_G0018454.1 mouse_genomes_project 11 77198215 77201130 + MGP_NODShiLtJ_P0030080 Gp1ba protein_coding protein_coding MGP_NODShiLtJ_T0030081.1 MGP_NODShiLtJ_G0018454.1 mouse_genomes_project 11 77198237 77200914 + MGP_NODShiLtJ_P0030081 Gp1ba protein_coding protein_coding MGP_NODShiLtJ_T0031626.1 MGP_NODShiLtJ_G0018843.1 mouse_genomes_project 11 105442686 105496674 - MGP_NODShiLtJ_P0031626 Igf2bp1 protein_coding protein_coding MGP_NODShiLtJ_T0031627.1 MGP_NODShiLtJ_G0018843.1 mouse_genomes_project 11 105448959 105453352 - Igf2bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031628.1 MGP_NODShiLtJ_G0018843.1 mouse_genomes_project 11 105460223 105469674 - Igf2bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031629.1 MGP_NODShiLtJ_G0018843.1 mouse_genomes_project 11 105461058 105469691 - Igf2bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031630.1 MGP_NODShiLtJ_G0018843.1 mouse_genomes_project 11 105465461 105469688 - Igf2bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0012667.1 MGP_NODShiLtJ_G0010775.1 mouse_genomes_project 11 131710811 131711256 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028701.1 MGP_NODShiLtJ_G0018118.1 mouse_genomes_project 11 55905299 56243924 + MGP_NODShiLtJ_P0028701 Col23a1 protein_coding protein_coding MGP_NODShiLtJ_T0028702.1 MGP_NODShiLtJ_G0018118.1 mouse_genomes_project 11 55905506 56236467 + MGP_NODShiLtJ_P0028702 Col23a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028703.1 MGP_NODShiLtJ_G0018118.1 mouse_genomes_project 11 56233069 56240305 + MGP_NODShiLtJ_P0028703 Col23a1 protein_coding protein_coding MGP_NODShiLtJ_T0003117.1 MGP_NODShiLtJ_G0002891.1 mouse_genomes_project 11 59829652 59834699 + Lyrm7os antisense antisense MGP_NODShiLtJ_T0033051.1 MGP_NODShiLtJ_G0019203.1 mouse_genomes_project 11 124643178 124993429 - MGP_NODShiLtJ_P0033051 Slc39a11 protein_coding protein_coding MGP_NODShiLtJ_T0033052.1 MGP_NODShiLtJ_G0019203.1 mouse_genomes_project 11 124643178 124993426 - MGP_NODShiLtJ_P0033052 Slc39a11 protein_coding protein_coding MGP_NODShiLtJ_T0033053.1 MGP_NODShiLtJ_G0019203.1 mouse_genomes_project 11 124643178 124993438 - MGP_NODShiLtJ_P0033053 Slc39a11 protein_coding protein_coding MGP_NODShiLtJ_T0033054.1 MGP_NODShiLtJ_G0019203.1 mouse_genomes_project 11 124785043 125084212 - MGP_NODShiLtJ_P0033054 Slc39a11 protein_coding protein_coding MGP_NODShiLtJ_T0033055.1 MGP_NODShiLtJ_G0019203.1 mouse_genomes_project 11 124888616 124993449 - MGP_NODShiLtJ_P0033055 Slc39a11 protein_coding protein_coding MGP_NODShiLtJ_T0033056.1 MGP_NODShiLtJ_G0019203.1 mouse_genomes_project 11 124949026 125084220 - MGP_NODShiLtJ_P0033056 Slc39a11 protein_coding protein_coding MGP_NODShiLtJ_T0033057.1 MGP_NODShiLtJ_G0019203.1 mouse_genomes_project 11 124987202 125084211 - MGP_NODShiLtJ_P0033057 Slc39a11 protein_coding protein_coding MGP_NODShiLtJ_T0033058.1 MGP_NODShiLtJ_G0019203.1 mouse_genomes_project 11 125006805 125084211 - Slc39a11 protein_coding processed_transcript MGP_NODShiLtJ_T0032129.1 MGP_NODShiLtJ_G0019010.1 mouse_genomes_project 11 110467597 110477716 - MGP_NODShiLtJ_P0032129 Klhl11 protein_coding protein_coding MGP_NODShiLtJ_T0029881.1 MGP_NODShiLtJ_G0018416.1 mouse_genomes_project 11 76370317 76373006 + MGP_NODShiLtJ_P0029881 Gps2 protein_coding protein_coding MGP_NODShiLtJ_T0029882.1 MGP_NODShiLtJ_G0018416.1 mouse_genomes_project 11 76370479 76373020 + MGP_NODShiLtJ_P0029882 Gps2 protein_coding protein_coding MGP_NODShiLtJ_T0029883.1 MGP_NODShiLtJ_G0018416.1 mouse_genomes_project 11 76370621 76373021 + MGP_NODShiLtJ_P0029883 Gps2 protein_coding protein_coding MGP_NODShiLtJ_T0029884.1 MGP_NODShiLtJ_G0018416.1 mouse_genomes_project 11 76371274 76372310 + Gps2 protein_coding processed_transcript MGP_NODShiLtJ_T0029885.1 MGP_NODShiLtJ_G0018416.1 mouse_genomes_project 11 76372470 76372986 + MGP_NODShiLtJ_P0029885 Gps2 protein_coding protein_coding MGP_NODShiLtJ_T0027942.1 MGP_NODShiLtJ_G0017923.1 mouse_genomes_project 11 19892106 19923991 - MGP_NODShiLtJ_P0027942 Slc1a4 protein_coding protein_coding MGP_NODShiLtJ_T0027943.1 MGP_NODShiLtJ_G0017923.1 mouse_genomes_project 11 19892131 19923962 - MGP_NODShiLtJ_P0027943 Slc1a4 protein_coding protein_coding MGP_NODShiLtJ_T0032933.1 MGP_NODShiLtJ_G0019175.1 mouse_genomes_project 11 118501901 118515183 - MGP_NODShiLtJ_P0032933 Cacng1 protein_coding protein_coding MGP_NODShiLtJ_T0031435.1 MGP_NODShiLtJ_G0018796.1 mouse_genomes_project 11 103137932 103145093 - MGP_NODShiLtJ_P0031435 Nme2 protein_coding protein_coding MGP_NODShiLtJ_T0031436.1 MGP_NODShiLtJ_G0018796.1 mouse_genomes_project 11 103137935 103144617 - MGP_NODShiLtJ_P0031436 Nme2 protein_coding protein_coding MGP_NODShiLtJ_T0012505.1 MGP_NODShiLtJ_G0010613.1 mouse_genomes_project 11 64411622 64412087 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030217.1 MGP_NODShiLtJ_G0018478.1 mouse_genomes_project 11 78864295 78865670 - 4933427D14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0030218.1 MGP_NODShiLtJ_G0018478.1 mouse_genomes_project 11 78864295 78924047 - MGP_NODShiLtJ_P0030218 4933427D14Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030219.1 MGP_NODShiLtJ_G0018478.1 mouse_genomes_project 11 78864296 78923855 - MGP_NODShiLtJ_P0030219 4933427D14Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030220.1 MGP_NODShiLtJ_G0018478.1 mouse_genomes_project 11 78864463 78920359 - MGP_NODShiLtJ_P0030220 4933427D14Rik protein_coding protein_coding MGP_NODShiLtJ_T0030221.1 MGP_NODShiLtJ_G0018478.1 mouse_genomes_project 11 78865759 78890878 - 4933427D14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0030222.1 MGP_NODShiLtJ_G0018478.1 mouse_genomes_project 11 78911974 78924019 - MGP_NODShiLtJ_P0030222 4933427D14Rik protein_coding protein_coding MGP_NODShiLtJ_T0030223.1 MGP_NODShiLtJ_G0018478.1 mouse_genomes_project 11 78914962 78923808 - 4933427D14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0030224.1 MGP_NODShiLtJ_G0018478.1 mouse_genomes_project 11 78915209 78919200 - 4933427D14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0012598.1 MGP_NODShiLtJ_G0010706.1 mouse_genomes_project 11 102878315 102878785 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033378.1 MGP_NODShiLtJ_G0019270.1 mouse_genomes_project 11 127827569 127836032 - MGP_NODShiLtJ_P0033378 Wbp2 protein_coding protein_coding MGP_NODShiLtJ_T0033379.1 MGP_NODShiLtJ_G0019270.1 mouse_genomes_project 11 127828248 127836032 - MGP_NODShiLtJ_P0033379 Wbp2 protein_coding protein_coding MGP_NODShiLtJ_T0033380.1 MGP_NODShiLtJ_G0019270.1 mouse_genomes_project 11 127828393 127830517 - Wbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0033381.1 MGP_NODShiLtJ_G0019270.1 mouse_genomes_project 11 127830860 127836032 - Wbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0033382.1 MGP_NODShiLtJ_G0019270.1 mouse_genomes_project 11 127832119 127836009 - Wbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0012345.1 MGP_NODShiLtJ_G0010453.1 mouse_genomes_project 11 2736523 2736967 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031962.1 MGP_NODShiLtJ_G0018924.1 mouse_genomes_project 11 108575380 108603932 + MGP_NODShiLtJ_P0031962 Casc3 protein_coding protein_coding MGP_NODShiLtJ_T0031963.1 MGP_NODShiLtJ_G0018924.1 mouse_genomes_project 11 108580265 108603924 + MGP_NODShiLtJ_P0031963 Casc3 protein_coding protein_coding MGP_NODShiLtJ_T0031964.1 MGP_NODShiLtJ_G0018924.1 mouse_genomes_project 11 108580607 108581386 + Casc3 protein_coding processed_transcript MGP_NODShiLtJ_T0031965.1 MGP_NODShiLtJ_G0018924.1 mouse_genomes_project 11 108580618 108592886 + Casc3 protein_coding processed_transcript MGP_NODShiLtJ_T0012359.1 MGP_NODShiLtJ_G0010467.1 mouse_genomes_project 11 6291133 6291903 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030448.1 MGP_NODShiLtJ_G0018555.1 mouse_genomes_project 11 82329216 82406393 + MGP_NODShiLtJ_P0030448 Rtn4rl1 protein_coding protein_coding MGP_NODShiLtJ_T0009619.1 MGP_NODShiLtJ_G0007752.1 mouse_genomes_project 11 81986974 81987042 - Mir6926 miRNA miRNA MGP_NODShiLtJ_T0098478.1 MGP_NODShiLtJ_G0036876.1 mouse_genomes_project 11 108013146 108015193 + Gm20644 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0032486.1 MGP_NODShiLtJ_G0019083.1 mouse_genomes_project 11 112511907 112517682 - MGP_NODShiLtJ_P0032486 Atxn7l3 protein_coding protein_coding MGP_NODShiLtJ_T0032487.1 MGP_NODShiLtJ_G0019083.1 mouse_genomes_project 11 112511911 112516057 - Atxn7l3 protein_coding retained_intron MGP_NODShiLtJ_T0032488.1 MGP_NODShiLtJ_G0019083.1 mouse_genomes_project 11 112511911 112517995 - MGP_NODShiLtJ_P0032488 Atxn7l3 protein_coding protein_coding MGP_NODShiLtJ_T0032489.1 MGP_NODShiLtJ_G0019083.1 mouse_genomes_project 11 112511911 112520209 - MGP_NODShiLtJ_P0032489 Atxn7l3 protein_coding protein_coding MGP_NODShiLtJ_T0032490.1 MGP_NODShiLtJ_G0019083.1 mouse_genomes_project 11 112511911 112517670 - MGP_NODShiLtJ_P0032490 Atxn7l3 protein_coding protein_coding MGP_NODShiLtJ_T0032491.1 MGP_NODShiLtJ_G0019083.1 mouse_genomes_project 11 112511912 112520207 - MGP_NODShiLtJ_P0032491 Atxn7l3 protein_coding protein_coding MGP_NODShiLtJ_T0030433.1 MGP_NODShiLtJ_G0018551.1 mouse_genomes_project 11 82042803 82294352 + MGP_NODShiLtJ_P0030433 Smg6 protein_coding protein_coding MGP_NODShiLtJ_T0030434.1 MGP_NODShiLtJ_G0018551.1 mouse_genomes_project 11 82047498 82294352 + MGP_NODShiLtJ_P0030434 Smg6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030435.1 MGP_NODShiLtJ_G0018551.1 mouse_genomes_project 11 82109038 82111884 + Smg6 protein_coding retained_intron MGP_NODShiLtJ_T0030436.1 MGP_NODShiLtJ_G0018551.1 mouse_genomes_project 11 82113530 82269446 + MGP_NODShiLtJ_P0030436 Smg6 protein_coding protein_coding MGP_NODShiLtJ_T0030437.1 MGP_NODShiLtJ_G0018551.1 mouse_genomes_project 11 82262511 82269446 + Smg6 protein_coding processed_transcript MGP_NODShiLtJ_T0030438.1 MGP_NODShiLtJ_G0018551.1 mouse_genomes_project 11 82289546 82293085 + Smg6 protein_coding processed_transcript MGP_NODShiLtJ_T0003089.1 MGP_NODShiLtJ_G0002864.1 mouse_genomes_project 11 35596108 35598123 + Gm12119 antisense antisense MGP_NODShiLtJ_T0033495.1 MGP_NODShiLtJ_G0019292.1 mouse_genomes_project 11 128443108 128458118 + MGP_NODShiLtJ_P0033495 protein_coding protein_coding MGP_NODShiLtJ_T0033496.1 MGP_NODShiLtJ_G0019292.1 mouse_genomes_project 11 128443108 128457823 + MGP_NODShiLtJ_P0033496 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033497.1 MGP_NODShiLtJ_G0019292.1 mouse_genomes_project 11 128443429 128458120 + MGP_NODShiLtJ_P0033497 protein_coding protein_coding MGP_NODShiLtJ_T0033498.1 MGP_NODShiLtJ_G0019292.1 mouse_genomes_project 11 128446667 128458118 + MGP_NODShiLtJ_P0033498 protein_coding protein_coding MGP_NODShiLtJ_T0033499.1 MGP_NODShiLtJ_G0019292.1 mouse_genomes_project 11 128446715 128449676 + protein_coding retained_intron MGP_NODShiLtJ_T0098668.1 MGP_NODShiLtJ_G0037062.1 mouse_genomes_project 11 18143560 18143662 + Gm23093 snRNA snRNA MGP_NODShiLtJ_T0012430.1 MGP_NODShiLtJ_G0010538.1 mouse_genomes_project 11 32302740 32303121 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030576.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83651460 83750320 - MGP_NODShiLtJ_P0030576 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030577.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83651460 83803529 - MGP_NODShiLtJ_P0030577 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030578.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83651461 83749896 - MGP_NODShiLtJ_P0030578 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030579.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83651477 83703960 - MGP_NODShiLtJ_P0030579 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030580.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83653830 83733447 - MGP_NODShiLtJ_P0030580 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030581.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83657764 83671942 - Abr protein_coding processed_transcript MGP_NODShiLtJ_T0030582.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83690015 83703793 - MGP_NODShiLtJ_P0030582 Abr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030583.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83693886 83732128 - Abr protein_coding retained_intron MGP_NODShiLtJ_T0030584.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83699730 83731052 - MGP_NODShiLtJ_P0030584 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030585.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83716340 83809745 - MGP_NODShiLtJ_P0030585 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030586.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83716394 83856343 - MGP_NODShiLtJ_P0030586 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030587.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83716450 83846898 - MGP_NODShiLtJ_P0030587 Abr protein_coding protein_coding MGP_NODShiLtJ_T0030588.1 MGP_NODShiLtJ_G0018583.1 mouse_genomes_project 11 83723088 83732107 - Abr protein_coding processed_transcript MGP_NODShiLtJ_T0012420.1 MGP_NODShiLtJ_G0010528.1 mouse_genomes_project 11 30676195 30676400 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033679.1 MGP_NODShiLtJ_G0019330.1 mouse_genomes_project 11 131052985 131058898 - MGP_NODShiLtJ_P0033679 Cbx8 protein_coding protein_coding MGP_NODShiLtJ_T0033680.1 MGP_NODShiLtJ_G0019330.1 mouse_genomes_project 11 131055733 131057512 - Cbx8 protein_coding processed_transcript MGP_NODShiLtJ_T0033681.1 MGP_NODShiLtJ_G0019330.1 mouse_genomes_project 11 131055864 131057592 - Cbx8 protein_coding processed_transcript MGP_NODShiLtJ_T0030087.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77206320 77207192 + Rnf167 protein_coding processed_transcript MGP_NODShiLtJ_T0030088.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77206372 77210505 + MGP_NODShiLtJ_P0030088 Rnf167 protein_coding protein_coding MGP_NODShiLtJ_T0030089.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77206372 77210496 + MGP_NODShiLtJ_P0030089 Rnf167 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030090.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77206640 77208851 + MGP_NODShiLtJ_P0030090 Rnf167 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030091.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77206646 77210494 + Rnf167 protein_coding retained_intron MGP_NODShiLtJ_T0030092.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77206654 77207340 + Rnf167 protein_coding retained_intron MGP_NODShiLtJ_T0030093.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77207028 77209420 + Rnf167 protein_coding retained_intron MGP_NODShiLtJ_T0030094.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77207160 77210175 + Rnf167 protein_coding retained_intron MGP_NODShiLtJ_T0030095.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77208207 77208618 + Rnf167 protein_coding retained_intron MGP_NODShiLtJ_T0030096.1 MGP_NODShiLtJ_G0018456.1 mouse_genomes_project 11 77209021 77209420 + Rnf167 protein_coding retained_intron MGP_NODShiLtJ_T0033439.1 MGP_NODShiLtJ_G0019281.1 mouse_genomes_project 11 128092725 128097416 - MGP_NODShiLtJ_P0033439 Foxj1 protein_coding protein_coding MGP_NODShiLtJ_T0006211.1 MGP_NODShiLtJ_G0005185.1 mouse_genomes_project 11 78624806 78636450 - 4930401O10Rik lincRNA lincRNA MGP_NODShiLtJ_T0033682.1 MGP_NODShiLtJ_G0019331.1 mouse_genomes_project 11 131097777 131106407 - MGP_NODShiLtJ_P0033682 Cbx4 protein_coding protein_coding MGP_NODShiLtJ_T0033683.1 MGP_NODShiLtJ_G0019331.1 mouse_genomes_project 11 131101559 131106407 - Cbx4 protein_coding processed_transcript MGP_NODShiLtJ_T0006300.1 MGP_NODShiLtJ_G0005248.1 mouse_genomes_project 11 128068956 128071593 + Gm26730 lincRNA lincRNA MGP_NODShiLtJ_T0101566.1 MGP_NODShiLtJ_G0039736.1 mouse_genomes_project 11 104208866 104209601 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0032127.1 MGP_NODShiLtJ_G0019009.1 mouse_genomes_project 11 110445977 110462008 + MGP_NODShiLtJ_P0032127 Klhl10 protein_coding protein_coding MGP_NODShiLtJ_T0032128.1 MGP_NODShiLtJ_G0019009.1 mouse_genomes_project 11 110445987 110449874 + MGP_NODShiLtJ_P0032128 Klhl10 protein_coding protein_coding MGP_NODShiLtJ_T0032270.1 MGP_NODShiLtJ_G0019041.1 mouse_genomes_project 11 111331016 111333239 + MGP_NODShiLtJ_P0032270 Ramp2 protein_coding protein_coding MGP_NODShiLtJ_T0032271.1 MGP_NODShiLtJ_G0019041.1 mouse_genomes_project 11 111331300 111332673 + Ramp2 protein_coding retained_intron MGP_NODShiLtJ_T0032272.1 MGP_NODShiLtJ_G0019041.1 mouse_genomes_project 11 111331379 111346305 + MGP_NODShiLtJ_P0032272 Ramp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032273.1 MGP_NODShiLtJ_G0019041.1 mouse_genomes_project 11 111331417 111333239 + MGP_NODShiLtJ_P0032273 Ramp2 protein_coding protein_coding MGP_NODShiLtJ_T0032274.1 MGP_NODShiLtJ_G0019041.1 mouse_genomes_project 11 111331420 111333239 + MGP_NODShiLtJ_P0032274 Ramp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032275.1 MGP_NODShiLtJ_G0019041.1 mouse_genomes_project 11 111331555 111332625 + MGP_NODShiLtJ_P0032275 Ramp2 protein_coding protein_coding MGP_NODShiLtJ_T0032276.1 MGP_NODShiLtJ_G0019041.1 mouse_genomes_project 11 111331921 111333239 + Ramp2 protein_coding retained_intron MGP_NODShiLtJ_T0032277.1 MGP_NODShiLtJ_G0019041.1 mouse_genomes_project 11 111332081 111333053 + MGP_NODShiLtJ_P0032277 Ramp2 protein_coding protein_coding MGP_NODShiLtJ_T0029222.1 MGP_NODShiLtJ_G0018270.1 mouse_genomes_project 11 66044004 66102591 + MGP_NODShiLtJ_P0029222 Myo15 protein_coding protein_coding MGP_NODShiLtJ_T0029223.1 MGP_NODShiLtJ_G0018270.1 mouse_genomes_project 11 66044004 66102591 + MGP_NODShiLtJ_P0029223 Myo15 protein_coding protein_coding MGP_NODShiLtJ_T0029224.1 MGP_NODShiLtJ_G0018270.1 mouse_genomes_project 11 66044004 66102591 + MGP_NODShiLtJ_P0029224 Myo15 protein_coding protein_coding MGP_NODShiLtJ_T0029225.1 MGP_NODShiLtJ_G0018270.1 mouse_genomes_project 11 66054595 66084385 + MGP_NODShiLtJ_P0029225 Myo15 protein_coding protein_coding MGP_NODShiLtJ_T0029226.1 MGP_NODShiLtJ_G0018270.1 mouse_genomes_project 11 66084206 66096200 + Myo15 protein_coding retained_intron MGP_NODShiLtJ_T0033967.1 MGP_NODShiLtJ_G0019384.1 mouse_genomes_project 11 132927595 132930900 - Rfng protein_coding processed_transcript MGP_NODShiLtJ_T0033968.1 MGP_NODShiLtJ_G0019384.1 mouse_genomes_project 11 132927597 132930922 - MGP_NODShiLtJ_P0033968 Rfng protein_coding protein_coding MGP_NODShiLtJ_T0012477.1 MGP_NODShiLtJ_G0010585.1 mouse_genomes_project 11 57162673 57162836 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031714.1 MGP_NODShiLtJ_G0018866.1 mouse_genomes_project 11 106513361 106514750 + Prr15l protein_coding processed_transcript MGP_NODShiLtJ_T0031715.1 MGP_NODShiLtJ_G0018866.1 mouse_genomes_project 11 106514559 106521929 + MGP_NODShiLtJ_P0031715 Prr15l protein_coding protein_coding MGP_NODShiLtJ_T0031716.1 MGP_NODShiLtJ_G0018866.1 mouse_genomes_project 11 106514581 106524111 + MGP_NODShiLtJ_P0031716 Prr15l protein_coding protein_coding MGP_NODShiLtJ_T0031717.1 MGP_NODShiLtJ_G0018866.1 mouse_genomes_project 11 106514651 106521924 + MGP_NODShiLtJ_P0031717 Prr15l protein_coding protein_coding MGP_NODShiLtJ_T0031718.1 MGP_NODShiLtJ_G0018866.1 mouse_genomes_project 11 106517672 106521561 + MGP_NODShiLtJ_P0031718 Prr15l protein_coding protein_coding MGP_NODShiLtJ_T0033590.1 MGP_NODShiLtJ_G0019309.1 mouse_genomes_project 11 129732287 129763981 + MGP_NODShiLtJ_P0033590 Gm20708 protein_coding protein_coding MGP_NODShiLtJ_T0032278.1 MGP_NODShiLtJ_G0019042.1 mouse_genomes_project 11 111339357 111346308 + MGP_NODShiLtJ_P0032278 Vps25 protein_coding protein_coding MGP_NODShiLtJ_T0032279.1 MGP_NODShiLtJ_G0019042.1 mouse_genomes_project 11 111339357 111344808 + MGP_NODShiLtJ_P0032279 Vps25 protein_coding protein_coding MGP_NODShiLtJ_T0032280.1 MGP_NODShiLtJ_G0019042.1 mouse_genomes_project 11 111339379 111346304 + MGP_NODShiLtJ_P0032280 Vps25 protein_coding protein_coding MGP_NODShiLtJ_T0032281.1 MGP_NODShiLtJ_G0019042.1 mouse_genomes_project 11 111339380 111345675 + MGP_NODShiLtJ_P0032281 Vps25 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032282.1 MGP_NODShiLtJ_G0019042.1 mouse_genomes_project 11 111339385 111346082 + MGP_NODShiLtJ_P0032282 Vps25 protein_coding protein_coding MGP_NODShiLtJ_T0032283.1 MGP_NODShiLtJ_G0019042.1 mouse_genomes_project 11 111339403 111345815 + MGP_NODShiLtJ_P0032283 Vps25 protein_coding protein_coding MGP_NODShiLtJ_T0032284.1 MGP_NODShiLtJ_G0019042.1 mouse_genomes_project 11 111339414 111345969 + Vps25 protein_coding retained_intron MGP_NODShiLtJ_T0009573.1 MGP_NODShiLtJ_G0007706.1 mouse_genomes_project 11 30015338 30015446 + Mir217 miRNA miRNA MGP_NODShiLtJ_T0027890.1 MGP_NODShiLtJ_G0017908.1 mouse_genomes_project 11 15710491 15718446 - MGP_NODShiLtJ_P0027890 Sec61g protein_coding protein_coding MGP_NODShiLtJ_T0027891.1 MGP_NODShiLtJ_G0017908.1 mouse_genomes_project 11 15711348 15718128 - MGP_NODShiLtJ_P0027891 Sec61g protein_coding protein_coding MGP_NODShiLtJ_T0027892.1 MGP_NODShiLtJ_G0017908.1 mouse_genomes_project 11 15711599 15718446 - MGP_NODShiLtJ_P0027892 Sec61g protein_coding protein_coding MGP_NODShiLtJ_T0027893.1 MGP_NODShiLtJ_G0017908.1 mouse_genomes_project 11 15711599 15718446 - MGP_NODShiLtJ_P0027893 Sec61g protein_coding protein_coding MGP_NODShiLtJ_T0027894.1 MGP_NODShiLtJ_G0017908.1 mouse_genomes_project 11 15711604 15715006 - Sec61g protein_coding retained_intron MGP_NODShiLtJ_T0027895.1 MGP_NODShiLtJ_G0017908.1 mouse_genomes_project 11 15711612 15718031 - MGP_NODShiLtJ_P0027895 Sec61g protein_coding protein_coding MGP_NODShiLtJ_T0027896.1 MGP_NODShiLtJ_G0017908.1 mouse_genomes_project 11 15716053 15718094 - Sec61g protein_coding retained_intron MGP_NODShiLtJ_T0032015.1 MGP_NODShiLtJ_G0018938.1 mouse_genomes_project 11 109177427 109186772 - Krt26 protein_coding processed_transcript MGP_NODShiLtJ_T0032016.1 MGP_NODShiLtJ_G0018938.1 mouse_genomes_project 11 109177491 109186773 - MGP_NODShiLtJ_P0032016 Krt26 protein_coding protein_coding MGP_NODShiLtJ_T0003142.1 MGP_NODShiLtJ_G0002912.1 mouse_genomes_project 11 68352368 68353363 - Gm12279 antisense antisense MGP_NODShiLtJ_T0101564.1 MGP_NODShiLtJ_G0039734.1 mouse_genomes_project 11 104082564 104083304 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0032752.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115666272 115787903 + MGP_NODShiLtJ_P0032752 Tlk2 protein_coding protein_coding MGP_NODShiLtJ_T0032753.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115668211 115704738 + Tlk2 protein_coding retained_intron MGP_NODShiLtJ_T0032754.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115668957 115786122 + MGP_NODShiLtJ_P0032754 Tlk2 protein_coding protein_coding MGP_NODShiLtJ_T0032755.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115669072 115780405 + MGP_NODShiLtJ_P0032755 Tlk2 protein_coding protein_coding MGP_NODShiLtJ_T0032756.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115669196 115786121 + MGP_NODShiLtJ_P0032756 Tlk2 protein_coding protein_coding MGP_NODShiLtJ_T0032757.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115669261 115780819 + MGP_NODShiLtJ_P0032757 Tlk2 protein_coding protein_coding MGP_NODShiLtJ_T0032758.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115669278 115786121 + MGP_NODShiLtJ_P0032758 Tlk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032759.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115669496 115705441 + MGP_NODShiLtJ_P0032759 Tlk2 protein_coding protein_coding MGP_NODShiLtJ_T0032760.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115702295 115740506 + Tlk2 protein_coding retained_intron MGP_NODShiLtJ_T0032761.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115703735 115749406 + MGP_NODShiLtJ_P0032761 Tlk2 protein_coding protein_coding MGP_NODShiLtJ_T0032762.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115746672 115747589 + Tlk2 protein_coding retained_intron MGP_NODShiLtJ_T0032763.1 MGP_NODShiLtJ_G0019136.1 mouse_genomes_project 11 115752501 115770378 + Tlk2 protein_coding processed_transcript MGP_NODShiLtJ_T0012530.1 MGP_NODShiLtJ_G0010638.1 mouse_genomes_project 11 76037175 76037564 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028183.1 MGP_NODShiLtJ_G0017975.1 mouse_genomes_project 11 32506351 32535813 - MGP_NODShiLtJ_P0028183 Erlec1 protein_coding protein_coding MGP_NODShiLtJ_T0028184.1 MGP_NODShiLtJ_G0017975.1 mouse_genomes_project 11 32507330 32529279 - MGP_NODShiLtJ_P0028184 Erlec1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028185.1 MGP_NODShiLtJ_G0017975.1 mouse_genomes_project 11 32513944 32528895 - MGP_NODShiLtJ_P0028185 Erlec1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028186.1 MGP_NODShiLtJ_G0017975.1 mouse_genomes_project 11 32523520 32529012 - Erlec1 protein_coding retained_intron MGP_NODShiLtJ_T0028187.1 MGP_NODShiLtJ_G0017975.1 mouse_genomes_project 11 32534673 32537233 - Erlec1 protein_coding processed_transcript MGP_NODShiLtJ_T0030591.1 MGP_NODShiLtJ_G0018586.1 mouse_genomes_project 11 83982019 84018990 - MGP_NODShiLtJ_P0030591 Gosr1 protein_coding protein_coding MGP_NODShiLtJ_T0030592.1 MGP_NODShiLtJ_G0018586.1 mouse_genomes_project 11 84003894 84018978 - Gosr1 protein_coding processed_transcript MGP_NODShiLtJ_T0006126.1 MGP_NODShiLtJ_G0005113.1 mouse_genomes_project 11 22701171 22705093 + Gm12056 lincRNA lincRNA MGP_NODShiLtJ_T0027542.1 MGP_NODShiLtJ_G0017830.1 mouse_genomes_project 11 1011500 1015464 - MGP_NODShiLtJ_P0027542 Mtfp1 protein_coding protein_coding MGP_NODShiLtJ_T0027543.1 MGP_NODShiLtJ_G0017830.1 mouse_genomes_project 11 1014454 1015161 - Mtfp1 protein_coding processed_transcript MGP_NODShiLtJ_T0003073.1 MGP_NODShiLtJ_G0002853.1 mouse_genomes_project 11 10352533 10377036 + Gm12002 antisense antisense MGP_NODShiLtJ_T0003074.1 MGP_NODShiLtJ_G0002853.1 mouse_genomes_project 11 10352552 10374579 + Gm12002 antisense antisense MGP_NODShiLtJ_T0003075.1 MGP_NODShiLtJ_G0002853.1 mouse_genomes_project 11 10360256 10391109 + Gm12002 antisense antisense MGP_NODShiLtJ_T0030723.1 MGP_NODShiLtJ_G0018612.1 mouse_genomes_project 11 85596012 85603103 - Traf4 protein_coding retained_intron MGP_NODShiLtJ_T0030724.1 MGP_NODShiLtJ_G0018612.1 mouse_genomes_project 11 85596913 85603103 - MGP_NODShiLtJ_P0030724 Traf4 protein_coding protein_coding MGP_NODShiLtJ_T0030725.1 MGP_NODShiLtJ_G0018612.1 mouse_genomes_project 11 85598306 85603030 - Traf4 protein_coding retained_intron MGP_NODShiLtJ_T0033583.1 MGP_NODShiLtJ_G0019307.1 mouse_genomes_project 11 129704907 129706980 + MGP_NODShiLtJ_P0033583 Tmc8 protein_coding protein_coding MGP_NODShiLtJ_T0033584.1 MGP_NODShiLtJ_G0019307.1 mouse_genomes_project 11 129705127 129715855 + MGP_NODShiLtJ_P0033584 Tmc8 protein_coding protein_coding MGP_NODShiLtJ_T0033585.1 MGP_NODShiLtJ_G0019307.1 mouse_genomes_project 11 129705145 129715933 + MGP_NODShiLtJ_P0033585 Tmc8 protein_coding protein_coding MGP_NODShiLtJ_T0033586.1 MGP_NODShiLtJ_G0019307.1 mouse_genomes_project 11 129705215 129715724 + MGP_NODShiLtJ_P0033586 Tmc8 protein_coding protein_coding MGP_NODShiLtJ_T0033587.1 MGP_NODShiLtJ_G0019307.1 mouse_genomes_project 11 129705487 129715910 + MGP_NODShiLtJ_P0033587 Tmc8 protein_coding protein_coding MGP_NODShiLtJ_T0033588.1 MGP_NODShiLtJ_G0019307.1 mouse_genomes_project 11 129714028 129715454 + Tmc8 protein_coding retained_intron MGP_NODShiLtJ_T0030768.1 MGP_NODShiLtJ_G0018621.1 mouse_genomes_project 11 85738991 85741896 + MGP_NODShiLtJ_P0030768 BC030499 protein_coding protein_coding MGP_NODShiLtJ_T0030769.1 MGP_NODShiLtJ_G0018621.1 mouse_genomes_project 11 85739042 85743493 + BC030499 protein_coding retained_intron MGP_NODShiLtJ_T0030770.1 MGP_NODShiLtJ_G0018621.1 mouse_genomes_project 11 85739044 85741969 + BC030499 protein_coding retained_intron MGP_NODShiLtJ_T0030771.1 MGP_NODShiLtJ_G0018621.1 mouse_genomes_project 11 85739079 85741984 + BC030499 protein_coding retained_intron MGP_NODShiLtJ_T0030772.1 MGP_NODShiLtJ_G0018621.1 mouse_genomes_project 11 85739706 85740314 + BC030499 protein_coding retained_intron MGP_NODShiLtJ_T0030773.1 MGP_NODShiLtJ_G0018621.1 mouse_genomes_project 11 85741957 85744956 + BC030499 protein_coding retained_intron MGP_NODShiLtJ_T0009686.1 MGP_NODShiLtJ_G0007819.1 mouse_genomes_project 11 132762247 132762301 - Mir6936 miRNA miRNA MGP_NODShiLtJ_T0033175.1 MGP_NODShiLtJ_G0019235.1 mouse_genomes_project 11 126956498 126975388 - MGP_NODShiLtJ_P0033175 Fads6 protein_coding protein_coding MGP_NODShiLtJ_T0033176.1 MGP_NODShiLtJ_G0019235.1 mouse_genomes_project 11 126972877 126975537 - Fads6 protein_coding processed_transcript MGP_NODShiLtJ_T0029831.1 MGP_NODShiLtJ_G0018404.1 mouse_genomes_project 11 76256404 76258426 - MGP_NODShiLtJ_P0029831 Tmem102 protein_coding protein_coding MGP_NODShiLtJ_T0031984.1 MGP_NODShiLtJ_G0018929.1 mouse_genomes_project 11 108773906 108774743 - MGP_NODShiLtJ_P0031984 Gjd3 protein_coding protein_coding MGP_NODShiLtJ_T0029053.1 MGP_NODShiLtJ_G0018224.1 mouse_genomes_project 11 64199419 64205501 + MGP_NODShiLtJ_P0029053 Olfr315 protein_coding protein_coding MGP_NODShiLtJ_T0029054.1 MGP_NODShiLtJ_G0018224.1 mouse_genomes_project 11 64205081 64206079 + MGP_NODShiLtJ_P0029054 Olfr315 protein_coding protein_coding MGP_NODShiLtJ_T0098180.1 MGP_NODShiLtJ_G0036592.1 mouse_genomes_project 11 128930964 128931157 + Gm26083 scaRNA scaRNA MGP_NODShiLtJ_T0006181.1 MGP_NODShiLtJ_G0005161.1 mouse_genomes_project 11 65430944 65440386 + Gm12714 lincRNA lincRNA MGP_NODShiLtJ_T0029052.1 MGP_NODShiLtJ_G0018223.1 mouse_genomes_project 11 64181615 64183798 + MGP_NODShiLtJ_P0029052 protein_coding protein_coding MGP_NODShiLtJ_T0006318.1 MGP_NODShiLtJ_G0005263.1 mouse_genomes_project 11 133278537 133279104 - Gm11791 lincRNA lincRNA MGP_NODShiLtJ_T0031781.1 MGP_NODShiLtJ_G0018883.1 mouse_genomes_project 11 107143429 107213862 - MGP_NODShiLtJ_P0031781 Srcin1 protein_coding protein_coding MGP_NODShiLtJ_T0031782.1 MGP_NODShiLtJ_G0018883.1 mouse_genomes_project 11 107147892 107212700 - MGP_NODShiLtJ_P0031782 Srcin1 protein_coding protein_coding MGP_NODShiLtJ_T0031783.1 MGP_NODShiLtJ_G0018883.1 mouse_genomes_project 11 107147965 107212566 - MGP_NODShiLtJ_P0031783 Srcin1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031784.1 MGP_NODShiLtJ_G0018883.1 mouse_genomes_project 11 107152683 107212591 - MGP_NODShiLtJ_P0031784 Srcin1 protein_coding protein_coding MGP_NODShiLtJ_T0031785.1 MGP_NODShiLtJ_G0018883.1 mouse_genomes_project 11 107169919 107212576 - MGP_NODShiLtJ_P0031785 Srcin1 protein_coding protein_coding MGP_NODShiLtJ_T0031786.1 MGP_NODShiLtJ_G0018883.1 mouse_genomes_project 11 107187773 107213879 - Srcin1 protein_coding processed_transcript MGP_NODShiLtJ_T0017025.1 MGP_NODShiLtJ_G0015020.1 mouse_genomes_project 11 524123 531749 - Tug1 processed_transcript antisense MGP_NODShiLtJ_T0017026.1 MGP_NODShiLtJ_G0015020.1 mouse_genomes_project 11 531073 533274 - Tug1 processed_transcript antisense MGP_NODShiLtJ_T0017027.1 MGP_NODShiLtJ_G0015020.1 mouse_genomes_project 11 532293 533911 - Tug1 processed_transcript TEC MGP_NODShiLtJ_T0006133.1 MGP_NODShiLtJ_G0005120.1 mouse_genomes_project 11 24996476 25006089 - Gm10466 lincRNA lincRNA MGP_NODShiLtJ_T0027488.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 374671 396401 - Smtn protein_coding processed_transcript MGP_NODShiLtJ_T0027489.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 374671 396441 - MGP_NODShiLtJ_P0027489 Smtn protein_coding protein_coding MGP_NODShiLtJ_T0027490.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 374671 396441 - MGP_NODShiLtJ_P0027490 Smtn protein_coding protein_coding MGP_NODShiLtJ_T0027491.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 374671 385085 - MGP_NODShiLtJ_P0027491 Smtn protein_coding protein_coding MGP_NODShiLtJ_T0027492.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 374671 396388 - MGP_NODShiLtJ_P0027492 Smtn protein_coding protein_coding MGP_NODShiLtJ_T0027493.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 374671 394546 - MGP_NODShiLtJ_P0027493 Smtn protein_coding protein_coding MGP_NODShiLtJ_T0027494.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 377687 379702 - Smtn protein_coding processed_transcript MGP_NODShiLtJ_T0027495.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 389607 397763 - MGP_NODShiLtJ_P0027495 Smtn protein_coding protein_coding MGP_NODShiLtJ_T0027496.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 389750 396400 - MGP_NODShiLtJ_P0027496 Smtn protein_coding protein_coding MGP_NODShiLtJ_T0027497.1 MGP_NODShiLtJ_G0017818.1 mouse_genomes_project 11 391961 396398 - Smtn protein_coding processed_transcript MGP_NODShiLtJ_T0097890.1 MGP_NODShiLtJ_G0036302.1 mouse_genomes_project 11 27733226 27733308 + n-R5s68 rRNA rRNA MGP_NODShiLtJ_T0009626.1 MGP_NODShiLtJ_G0007759.1 mouse_genomes_project 11 85503530 85503596 + Mir144 miRNA miRNA MGP_NODShiLtJ_T0031851.1 MGP_NODShiLtJ_G0018898.1 mouse_genomes_project 11 107722424 107727397 + MGP_NODShiLtJ_P0031851 Rpl19 protein_coding protein_coding MGP_NODShiLtJ_T0031852.1 MGP_NODShiLtJ_G0018898.1 mouse_genomes_project 11 107722638 107727397 + MGP_NODShiLtJ_P0031852 Rpl19 protein_coding protein_coding MGP_NODShiLtJ_T0031853.1 MGP_NODShiLtJ_G0018898.1 mouse_genomes_project 11 107722671 107723862 + Rpl19 protein_coding retained_intron MGP_NODShiLtJ_T0012390.1 MGP_NODShiLtJ_G0010498.1 mouse_genomes_project 11 20068093 20068492 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012648.1 MGP_NODShiLtJ_G0010756.1 mouse_genomes_project 11 122410337 122411169 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029110.1 MGP_NODShiLtJ_G0018248.1 mouse_genomes_project 11 64911983 64959888 - MGP_NODShiLtJ_P0029110 Snap47 protein_coding protein_coding MGP_NODShiLtJ_T0029111.1 MGP_NODShiLtJ_G0018248.1 mouse_genomes_project 11 64911993 64959896 - MGP_NODShiLtJ_P0029111 Snap47 protein_coding protein_coding MGP_NODShiLtJ_T0029112.1 MGP_NODShiLtJ_G0018248.1 mouse_genomes_project 11 64934619 64959888 - MGP_NODShiLtJ_P0029112 Snap47 protein_coding protein_coding MGP_NODShiLtJ_T0029113.1 MGP_NODShiLtJ_G0018248.1 mouse_genomes_project 11 64934625 64959802 - MGP_NODShiLtJ_P0029113 Snap47 protein_coding protein_coding MGP_NODShiLtJ_T0029114.1 MGP_NODShiLtJ_G0018248.1 mouse_genomes_project 11 64945855 64959888 - MGP_NODShiLtJ_P0029114 Snap47 protein_coding protein_coding MGP_NODShiLtJ_T0029115.1 MGP_NODShiLtJ_G0018248.1 mouse_genomes_project 11 64946077 64955520 - MGP_NODShiLtJ_P0029115 Snap47 protein_coding protein_coding MGP_NODShiLtJ_T0029116.1 MGP_NODShiLtJ_G0018248.1 mouse_genomes_project 11 64946109 64959805 - MGP_NODShiLtJ_P0029116 Snap47 protein_coding protein_coding MGP_NODShiLtJ_T0029117.1 MGP_NODShiLtJ_G0018248.1 mouse_genomes_project 11 64946270 64961075 - MGP_NODShiLtJ_P0029117 Snap47 protein_coding protein_coding MGP_NODShiLtJ_T0028796.1 MGP_NODShiLtJ_G0018143.1 mouse_genomes_project 11 58302562 58305440 - MGP_NODShiLtJ_P0028796 Uqcrq protein_coding protein_coding MGP_NODShiLtJ_T0028797.1 MGP_NODShiLtJ_G0018143.1 mouse_genomes_project 11 58303575 58305444 - Uqcrq protein_coding processed_transcript MGP_NODShiLtJ_T0028798.1 MGP_NODShiLtJ_G0018143.1 mouse_genomes_project 11 58303575 58305440 - MGP_NODShiLtJ_P0028798 Uqcrq protein_coding protein_coding MGP_NODShiLtJ_T0028799.1 MGP_NODShiLtJ_G0018143.1 mouse_genomes_project 11 58303575 58305047 - MGP_NODShiLtJ_P0028799 Uqcrq protein_coding protein_coding MGP_NODShiLtJ_T0012393.1 MGP_NODShiLtJ_G0010501.1 mouse_genomes_project 11 20515458 20515665 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012478.1 MGP_NODShiLtJ_G0010586.1 mouse_genomes_project 11 57237514 57238042 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032285.1 MGP_NODShiLtJ_G0019043.1 mouse_genomes_project 11 111347323 111366095 + MGP_NODShiLtJ_P0032285 Wnk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032286.1 MGP_NODShiLtJ_G0019043.1 mouse_genomes_project 11 111347354 111366095 + MGP_NODShiLtJ_P0032286 Wnk4 protein_coding protein_coding MGP_NODShiLtJ_T0032287.1 MGP_NODShiLtJ_G0019043.1 mouse_genomes_project 11 111347411 111365960 + MGP_NODShiLtJ_P0032287 Wnk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032288.1 MGP_NODShiLtJ_G0019043.1 mouse_genomes_project 11 111353165 111362936 + MGP_NODShiLtJ_P0032288 Wnk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032289.1 MGP_NODShiLtJ_G0019043.1 mouse_genomes_project 11 111365331 111366092 + MGP_NODShiLtJ_P0032289 Wnk4 protein_coding protein_coding MGP_NODShiLtJ_T0032171.1 MGP_NODShiLtJ_G0019018.1 mouse_genomes_project 11 110724551 110731979 - Kat2a protein_coding processed_transcript MGP_NODShiLtJ_T0032172.1 MGP_NODShiLtJ_G0019018.1 mouse_genomes_project 11 110724551 110732255 - Kat2a protein_coding processed_transcript MGP_NODShiLtJ_T0032173.1 MGP_NODShiLtJ_G0019018.1 mouse_genomes_project 11 110724551 110732271 - MGP_NODShiLtJ_P0032173 Kat2a protein_coding protein_coding MGP_NODShiLtJ_T0032174.1 MGP_NODShiLtJ_G0019018.1 mouse_genomes_project 11 110724551 110732271 - MGP_NODShiLtJ_P0032174 Kat2a protein_coding protein_coding MGP_NODShiLtJ_T0031643.1 MGP_NODShiLtJ_G0018848.1 mouse_genomes_project 11 105605365 105619320 - MGP_NODShiLtJ_P0031643 Calcoco2 protein_coding protein_coding MGP_NODShiLtJ_T0031644.1 MGP_NODShiLtJ_G0018848.1 mouse_genomes_project 11 105605953 105619318 - MGP_NODShiLtJ_P0031644 Calcoco2 protein_coding protein_coding MGP_NODShiLtJ_T0006208.1 MGP_NODShiLtJ_G0005183.1 mouse_genomes_project 11 78395681 78397716 - Gm12325 lincRNA lincRNA MGP_NODShiLtJ_T0030650.1 MGP_NODShiLtJ_G0018598.1 mouse_genomes_project 11 84855309 84860236 + MGP_NODShiLtJ_P0030650 Abhd15 protein_coding protein_coding MGP_NODShiLtJ_T0030651.1 MGP_NODShiLtJ_G0018598.1 mouse_genomes_project 11 84856172 84881925 + MGP_NODShiLtJ_P0030651 Abhd15 protein_coding protein_coding MGP_NODShiLtJ_T0030653.1 MGP_NODShiLtJ_G0018598.1 mouse_genomes_project 11 84858808 84881923 + MGP_NODShiLtJ_P0030653 Abhd15 protein_coding protein_coding MGP_NODShiLtJ_T0006280.1 MGP_NODShiLtJ_G0005233.1 mouse_genomes_project 11 120570308 120598301 + Gm11685 lincRNA lincRNA MGP_NODShiLtJ_T0030856.1 MGP_NODShiLtJ_G0018645.1 mouse_genomes_project 11 86837386 86842954 + Nf1 protein_coding processed_transcript MGP_NODShiLtJ_T0030857.1 MGP_NODShiLtJ_G0018645.1 mouse_genomes_project 11 86837485 87084199 + MGP_NODShiLtJ_P0030857 Nf1 protein_coding protein_coding MGP_NODShiLtJ_T0030858.1 MGP_NODShiLtJ_G0018645.1 mouse_genomes_project 11 86837518 87087571 + MGP_NODShiLtJ_P0030858 Nf1 protein_coding protein_coding MGP_NODShiLtJ_T0030859.1 MGP_NODShiLtJ_G0018645.1 mouse_genomes_project 11 86837580 86927452 + Nf1 protein_coding retained_intron MGP_NODShiLtJ_T0030860.1 MGP_NODShiLtJ_G0018645.1 mouse_genomes_project 11 86946346 86974834 + Nf1 protein_coding processed_transcript MGP_NODShiLtJ_T0030861.1 MGP_NODShiLtJ_G0018645.1 mouse_genomes_project 11 86946346 86974834 + Nf1 protein_coding processed_transcript MGP_NODShiLtJ_T0030871.1 MGP_NODShiLtJ_G0018645.1 mouse_genomes_project 11 87041107 87075373 + Nf1 protein_coding retained_intron MGP_NODShiLtJ_T0030872.1 MGP_NODShiLtJ_G0018645.1 mouse_genomes_project 11 87051655 87085305 + MGP_NODShiLtJ_P0030872 Nf1 protein_coding protein_coding MGP_NODShiLtJ_T0029109.1 MGP_NODShiLtJ_G0018247.1 mouse_genomes_project 11 64876275 64879265 - MGP_NODShiLtJ_P0029109 Prss38 protein_coding protein_coding MGP_NODShiLtJ_T0099900.1 MGP_NODShiLtJ_G0038294.1 mouse_genomes_project 11 3756039 3756128 - Gm24000 snoRNA snoRNA MGP_NODShiLtJ_T0012471.1 MGP_NODShiLtJ_G0010579.1 mouse_genomes_project 11 54256613 54256992 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029838.1 MGP_NODShiLtJ_G0018408.1 mouse_genomes_project 11 76291149 76292249 + MGP_NODShiLtJ_P0029838 Tmem256 protein_coding protein_coding MGP_NODShiLtJ_T0029839.1 MGP_NODShiLtJ_G0018408.1 mouse_genomes_project 11 76291159 76292254 + MGP_NODShiLtJ_P0029839 Tmem256 protein_coding protein_coding MGP_NODShiLtJ_T0029840.1 MGP_NODShiLtJ_G0018408.1 mouse_genomes_project 11 76291190 76292083 + Tmem256 protein_coding processed_transcript MGP_NODShiLtJ_T0029841.1 MGP_NODShiLtJ_G0018408.1 mouse_genomes_project 11 76291198 76292248 + Tmem256 protein_coding processed_transcript MGP_NODShiLtJ_T0029842.1 MGP_NODShiLtJ_G0018408.1 mouse_genomes_project 11 76291273 76292209 + Tmem256 protein_coding processed_transcript MGP_NODShiLtJ_T0028787.1 MGP_NODShiLtJ_G0018141.1 mouse_genomes_project 11 58209294 58296651 + MGP_NODShiLtJ_P0028787 Aff4 protein_coding protein_coding MGP_NODShiLtJ_T0028788.1 MGP_NODShiLtJ_G0018141.1 mouse_genomes_project 11 58231038 58237212 + MGP_NODShiLtJ_P0028788 Aff4 protein_coding protein_coding MGP_NODShiLtJ_T0028789.1 MGP_NODShiLtJ_G0018141.1 mouse_genomes_project 11 58231595 58240630 + Aff4 protein_coding retained_intron MGP_NODShiLtJ_T0028790.1 MGP_NODShiLtJ_G0018141.1 mouse_genomes_project 11 58237271 58240403 + Aff4 protein_coding retained_intron MGP_NODShiLtJ_T0028791.1 MGP_NODShiLtJ_G0018141.1 mouse_genomes_project 11 58237657 58269856 + MGP_NODShiLtJ_P0028791 Aff4 protein_coding protein_coding MGP_NODShiLtJ_T0028792.1 MGP_NODShiLtJ_G0018141.1 mouse_genomes_project 11 58237665 58271425 + Aff4 protein_coding processed_transcript MGP_NODShiLtJ_T0028793.1 MGP_NODShiLtJ_G0018141.1 mouse_genomes_project 11 58277975 58284028 + Aff4 protein_coding retained_intron MGP_NODShiLtJ_T0028794.1 MGP_NODShiLtJ_G0018141.1 mouse_genomes_project 11 58285511 58290652 + Aff4 protein_coding retained_intron MGP_NODShiLtJ_T0033071.1 MGP_NODShiLtJ_G0019207.1 mouse_genomes_project 11 125122864 125133101 + MGP_NODShiLtJ_P0033071 D11Wsu47e protein_coding protein_coding MGP_NODShiLtJ_T0033072.1 MGP_NODShiLtJ_G0019207.1 mouse_genomes_project 11 125122892 125126668 + MGP_NODShiLtJ_P0033072 D11Wsu47e protein_coding protein_coding MGP_NODShiLtJ_T0033073.1 MGP_NODShiLtJ_G0019207.1 mouse_genomes_project 11 125122899 125133101 + MGP_NODShiLtJ_P0033073 D11Wsu47e protein_coding protein_coding MGP_NODShiLtJ_T0033074.1 MGP_NODShiLtJ_G0019207.1 mouse_genomes_project 11 125123538 125126583 + MGP_NODShiLtJ_P0033074 D11Wsu47e protein_coding protein_coding MGP_NODShiLtJ_T0012404.1 MGP_NODShiLtJ_G0010512.1 mouse_genomes_project 11 21783175 21783739 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028364.1 MGP_NODShiLtJ_G0018023.1 mouse_genomes_project 11 45942745 46198714 + MGP_NODShiLtJ_P0028364 Gabrb2 protein_coding protein_coding MGP_NODShiLtJ_T0028365.1 MGP_NODShiLtJ_G0018023.1 mouse_genomes_project 11 45942752 45946222 + Gabrb2 protein_coding processed_transcript MGP_NODShiLtJ_T0028366.1 MGP_NODShiLtJ_G0018023.1 mouse_genomes_project 11 45944862 46044573 + Gabrb2 protein_coding processed_transcript MGP_NODShiLtJ_T0028367.1 MGP_NODShiLtJ_G0018023.1 mouse_genomes_project 11 45944893 46092427 + Gabrb2 protein_coding processed_transcript MGP_NODShiLtJ_T0028368.1 MGP_NODShiLtJ_G0018023.1 mouse_genomes_project 11 45944933 46196577 + MGP_NODShiLtJ_P0028368 Gabrb2 protein_coding protein_coding MGP_NODShiLtJ_T0003113.1 MGP_NODShiLtJ_G0002888.1 mouse_genomes_project 11 59205725 59212658 + Gm12223 antisense antisense MGP_NODShiLtJ_T0030971.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90529933 90551688 + MGP_NODShiLtJ_P0030971 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0030972.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90529960 90553100 + MGP_NODShiLtJ_P0030972 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0030973.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90529967 90545367 + Lig3 protein_coding retained_intron MGP_NODShiLtJ_T0030974.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90530010 90549479 + MGP_NODShiLtJ_P0030974 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0030975.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90530018 90550851 + MGP_NODShiLtJ_P0030975 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0030976.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90530018 90550852 + MGP_NODShiLtJ_P0030976 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0030977.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90530023 90539130 + MGP_NODShiLtJ_P0030977 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0030978.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90530023 90539131 + MGP_NODShiLtJ_P0030978 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0030979.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90530028 90553024 + MGP_NODShiLtJ_P0030979 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0030980.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90544510 90548376 + Lig3 protein_coding retained_intron MGP_NODShiLtJ_T0030981.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90546043 90548393 + Lig3 protein_coding retained_intron MGP_NODShiLtJ_T0030982.1 MGP_NODShiLtJ_G0018679.1 mouse_genomes_project 11 90547174 90553100 + MGP_NODShiLtJ_P0030982 Lig3 protein_coding protein_coding MGP_NODShiLtJ_T0032343.1 MGP_NODShiLtJ_G0019057.1 mouse_genomes_project 11 111585911 111593395 - MGP_NODShiLtJ_P0032343 Vat1 protein_coding protein_coding MGP_NODShiLtJ_T0003133.1 MGP_NODShiLtJ_G0002905.1 mouse_genomes_project 11 65483085 65484337 - Med9os antisense antisense MGP_NODShiLtJ_T0003134.1 MGP_NODShiLtJ_G0002905.1 mouse_genomes_project 11 65483085 65484287 - Med9os antisense antisense MGP_NODShiLtJ_T0003135.1 MGP_NODShiLtJ_G0002905.1 mouse_genomes_project 11 65483085 65484338 - Med9os antisense antisense MGP_NODShiLtJ_T0006240.1 MGP_NODShiLtJ_G0005205.1 mouse_genomes_project 11 96386201 96397426 - 2010015M23Rik lincRNA lincRNA MGP_NODShiLtJ_T0033727.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131545458 131562249 + MGP_NODShiLtJ_P0033727 Endov protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033728.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131545459 131561985 + MGP_NODShiLtJ_P0033728 Endov protein_coding protein_coding MGP_NODShiLtJ_T0033729.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131545459 131564137 + MGP_NODShiLtJ_P0033729 Endov protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033730.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131545510 131561937 + MGP_NODShiLtJ_P0033730 Endov protein_coding protein_coding MGP_NODShiLtJ_T0033731.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131545635 131559556 + MGP_NODShiLtJ_P0033731 Endov protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033732.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131545760 131555252 + Endov protein_coding retained_intron MGP_NODShiLtJ_T0033733.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131545869 131557262 + Endov protein_coding processed_transcript MGP_NODShiLtJ_T0033734.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131553945 131560259 + MGP_NODShiLtJ_P0033734 Endov protein_coding protein_coding MGP_NODShiLtJ_T0033735.1 MGP_NODShiLtJ_G0019340.1 mouse_genomes_project 11 131556412 131561947 + Endov protein_coding retained_intron MGP_NODShiLtJ_T0028918.1 MGP_NODShiLtJ_G0018172.1 mouse_genomes_project 11 59836596 59880255 - MGP_NODShiLtJ_P0028918 Lyrm7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028919.1 MGP_NODShiLtJ_G0018172.1 mouse_genomes_project 11 59851182 59879947 - MGP_NODShiLtJ_P0028919 Lyrm7 protein_coding protein_coding MGP_NODShiLtJ_T0028920.1 MGP_NODShiLtJ_G0018172.1 mouse_genomes_project 11 59851183 59879927 - MGP_NODShiLtJ_P0028920 Lyrm7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028921.1 MGP_NODShiLtJ_G0018172.1 mouse_genomes_project 11 59852462 59866381 - Lyrm7 protein_coding retained_intron MGP_NODShiLtJ_T0028922.1 MGP_NODShiLtJ_G0018172.1 mouse_genomes_project 11 59852502 59879948 - Lyrm7 protein_coding processed_transcript MGP_NODShiLtJ_T0028923.1 MGP_NODShiLtJ_G0018172.1 mouse_genomes_project 11 59866068 59879924 - Lyrm7 protein_coding retained_intron MGP_NODShiLtJ_T0027526.1 MGP_NODShiLtJ_G0017827.1 mouse_genomes_project 11 897239 912714 + MGP_NODShiLtJ_P0027526 Gal3st1 protein_coding protein_coding MGP_NODShiLtJ_T0027527.1 MGP_NODShiLtJ_G0017827.1 mouse_genomes_project 11 897316 912703 + MGP_NODShiLtJ_P0027527 Gal3st1 protein_coding protein_coding MGP_NODShiLtJ_T0027528.1 MGP_NODShiLtJ_G0017827.1 mouse_genomes_project 11 903709 912696 + MGP_NODShiLtJ_P0027528 Gal3st1 protein_coding protein_coding MGP_NODShiLtJ_T0031551.1 MGP_NODShiLtJ_G0018823.1 mouse_genomes_project 11 104384388 104400251 + MGP_NODShiLtJ_P0031551 Ppp1r9b protein_coding protein_coding MGP_NODShiLtJ_T0031552.1 MGP_NODShiLtJ_G0018823.1 mouse_genomes_project 11 104386233 104394680 + Ppp1r9b protein_coding processed_transcript MGP_NODShiLtJ_T0031553.1 MGP_NODShiLtJ_G0018823.1 mouse_genomes_project 11 104389417 104400251 + MGP_NODShiLtJ_P0031553 Ppp1r9b protein_coding protein_coding MGP_NODShiLtJ_T0012352.1 MGP_NODShiLtJ_G0010460.1 mouse_genomes_project 11 3769825 3770259 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029503.1 MGP_NODShiLtJ_G0018328.1 mouse_genomes_project 11 71900159 71922207 + MGP_NODShiLtJ_P0029503 Zkscan6 protein_coding protein_coding MGP_NODShiLtJ_T0029504.1 MGP_NODShiLtJ_G0018328.1 mouse_genomes_project 11 71900228 71922208 + MGP_NODShiLtJ_P0029504 Zkscan6 protein_coding protein_coding MGP_NODShiLtJ_T0032824.1 MGP_NODShiLtJ_G0019153.1 mouse_genomes_project 11 116878861 116886863 + MGP_NODShiLtJ_P0032824 Psmc5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032825.1 MGP_NODShiLtJ_G0019153.1 mouse_genomes_project 11 116878861 116886863 + MGP_NODShiLtJ_P0032825 Psmc5 protein_coding protein_coding MGP_NODShiLtJ_T0006276.1 MGP_NODShiLtJ_G0005229.1 mouse_genomes_project 11 113243523 113249598 - 2410004I01Rik lincRNA lincRNA MGP_NODShiLtJ_T0012633.1 MGP_NODShiLtJ_G0010741.1 mouse_genomes_project 11 114986673 114986963 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101572.1 MGP_NODShiLtJ_G0039742.1 mouse_genomes_project 11 109911798 109912215 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101575.1 MGP_NODShiLtJ_G0039745.1 mouse_genomes_project 11 111452616 111453513 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012415.1 MGP_NODShiLtJ_G0010523.1 mouse_genomes_project 11 28239196 28239917 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006304.1 MGP_NODShiLtJ_G0005251.1 mouse_genomes_project 11 128930511 128931179 + Snhg20 lincRNA lincRNA MGP_NODShiLtJ_T0006305.1 MGP_NODShiLtJ_G0005251.1 mouse_genomes_project 11 128930511 128932677 + Snhg20 lincRNA lincRNA MGP_NODShiLtJ_T0006306.1 MGP_NODShiLtJ_G0005251.1 mouse_genomes_project 11 128930523 128932676 + Snhg20 lincRNA lincRNA MGP_NODShiLtJ_T0033090.1 MGP_NODShiLtJ_G0019211.1 mouse_genomes_project 11 126194131 126197939 + MGP_NODShiLtJ_P0033090 Rpl38 protein_coding protein_coding MGP_NODShiLtJ_T0033091.1 MGP_NODShiLtJ_G0019211.1 mouse_genomes_project 11 126194155 126197939 + MGP_NODShiLtJ_P0033091 Rpl38 protein_coding protein_coding MGP_NODShiLtJ_T0033092.1 MGP_NODShiLtJ_G0019211.1 mouse_genomes_project 11 126194216 126197939 + MGP_NODShiLtJ_P0033092 Rpl38 protein_coding protein_coding MGP_NODShiLtJ_T0033093.1 MGP_NODShiLtJ_G0019211.1 mouse_genomes_project 11 126194233 126197939 + MGP_NODShiLtJ_P0033093 Rpl38 protein_coding protein_coding MGP_NODShiLtJ_T0028156.1 MGP_NODShiLtJ_G0017968.1 mouse_genomes_project 11 31180240 31484350 - MGP_NODShiLtJ_P0028156 Eml6 protein_coding protein_coding MGP_NODShiLtJ_T0028157.1 MGP_NODShiLtJ_G0017968.1 mouse_genomes_project 11 31181330 31205243 - Eml6 protein_coding retained_intron MGP_NODShiLtJ_T0028158.1 MGP_NODShiLtJ_G0017968.1 mouse_genomes_project 11 31185767 31190539 - Eml6 protein_coding retained_intron MGP_NODShiLtJ_T0028159.1 MGP_NODShiLtJ_G0017968.1 mouse_genomes_project 11 31186579 31188595 - Eml6 protein_coding retained_intron MGP_NODShiLtJ_T0028160.1 MGP_NODShiLtJ_G0017968.1 mouse_genomes_project 11 31189032 31201273 - MGP_NODShiLtJ_P0028160 Eml6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028161.1 MGP_NODShiLtJ_G0017968.1 mouse_genomes_project 11 31242227 31243332 - Eml6 protein_coding retained_intron MGP_NODShiLtJ_T0028162.1 MGP_NODShiLtJ_G0017968.1 mouse_genomes_project 11 31249520 31261839 - MGP_NODShiLtJ_P0028162 Eml6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030633.1 MGP_NODShiLtJ_G0018595.1 mouse_genomes_project 11 84796820 84823600 - MGP_NODShiLtJ_P0030633 Ankrd13b protein_coding protein_coding MGP_NODShiLtJ_T0030634.1 MGP_NODShiLtJ_G0018595.1 mouse_genomes_project 11 84796820 84803688 - MGP_NODShiLtJ_P0030634 Ankrd13b protein_coding protein_coding MGP_NODShiLtJ_T0030635.1 MGP_NODShiLtJ_G0018595.1 mouse_genomes_project 11 84796822 84799961 - Ankrd13b protein_coding retained_intron MGP_NODShiLtJ_T0030636.1 MGP_NODShiLtJ_G0018595.1 mouse_genomes_project 11 84796822 84823612 - MGP_NODShiLtJ_P0030636 Ankrd13b protein_coding protein_coding MGP_NODShiLtJ_T0030637.1 MGP_NODShiLtJ_G0018595.1 mouse_genomes_project 11 84798450 84804017 - Ankrd13b protein_coding retained_intron MGP_NODShiLtJ_T0030638.1 MGP_NODShiLtJ_G0018595.1 mouse_genomes_project 11 84799107 84803499 - MGP_NODShiLtJ_P0030638 Ankrd13b protein_coding protein_coding MGP_NODShiLtJ_T0003291.1 MGP_NODShiLtJ_G0003032.1 mouse_genomes_project 11 127689701 127695359 - Sap30bpos antisense antisense MGP_NODShiLtJ_T0032440.1 MGP_NODShiLtJ_G0019076.1 mouse_genomes_project 11 112372848 112376707 - MGP_NODShiLtJ_P0032440 Tmem101 protein_coding protein_coding MGP_NODShiLtJ_T0032441.1 MGP_NODShiLtJ_G0019076.1 mouse_genomes_project 11 112374476 112376650 - Tmem101 protein_coding processed_transcript MGP_NODShiLtJ_T0032442.1 MGP_NODShiLtJ_G0019076.1 mouse_genomes_project 11 112376117 112376658 - Tmem101 protein_coding processed_transcript MGP_NODShiLtJ_T0034071.1 MGP_NODShiLtJ_G0019409.1 mouse_genomes_project 11 133929629 133943103 + MGP_NODShiLtJ_P0034071 Metrnl protein_coding protein_coding MGP_NODShiLtJ_T0034072.1 MGP_NODShiLtJ_G0019409.1 mouse_genomes_project 11 133929766 133942876 + MGP_NODShiLtJ_P0034072 Metrnl protein_coding protein_coding MGP_NODShiLtJ_T0009641.1 MGP_NODShiLtJ_G0007774.1 mouse_genomes_project 11 100873540 100873609 - Gm22702 miRNA miRNA MGP_NODShiLtJ_T0030134.1 MGP_NODShiLtJ_G0018463.1 mouse_genomes_project 11 77334408 77355153 + MGP_NODShiLtJ_P0030134 Zfp3 protein_coding protein_coding MGP_NODShiLtJ_T0012570.1 MGP_NODShiLtJ_G0010678.1 mouse_genomes_project 11 89229525 89230344 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032593.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113119101 113163570 - MGP_NODShiLtJ_P0032593 Eftud2 protein_coding protein_coding MGP_NODShiLtJ_T0032594.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113119101 113163588 - MGP_NODShiLtJ_P0032594 Eftud2 protein_coding protein_coding MGP_NODShiLtJ_T0032595.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113119105 113124870 - MGP_NODShiLtJ_P0032595 Eftud2 protein_coding protein_coding MGP_NODShiLtJ_T0032596.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113119429 113160314 - MGP_NODShiLtJ_P0032596 Eftud2 protein_coding protein_coding MGP_NODShiLtJ_T0032597.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113119466 113121882 - MGP_NODShiLtJ_P0032597 Eftud2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032598.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113120078 113121304 - Eftud2 protein_coding retained_intron MGP_NODShiLtJ_T0032599.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113120839 113128684 - Eftud2 protein_coding retained_intron MGP_NODShiLtJ_T0032600.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113129893 113142581 - Eftud2 protein_coding retained_intron MGP_NODShiLtJ_T0032601.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113144975 113160290 - MGP_NODShiLtJ_P0032601 Eftud2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032602.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113146223 113148322 - Eftud2 protein_coding retained_intron MGP_NODShiLtJ_T0032603.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113148214 113163567 - Eftud2 protein_coding retained_intron MGP_NODShiLtJ_T0032604.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113152224 113160315 - Eftud2 protein_coding retained_intron MGP_NODShiLtJ_T0032605.1 MGP_NODShiLtJ_G0019099.1 mouse_genomes_project 11 113159563 113163538 - Eftud2 protein_coding retained_intron MGP_NODShiLtJ_T0027740.1 MGP_NODShiLtJ_G0017875.1 mouse_genomes_project 11 3418496 3427347 - MGP_NODShiLtJ_P0027740 Ddx56 protein_coding protein_coding MGP_NODShiLtJ_T0027741.1 MGP_NODShiLtJ_G0017875.1 mouse_genomes_project 11 3424881 3425967 - Ddx56 protein_coding retained_intron MGP_NODShiLtJ_T0027742.1 MGP_NODShiLtJ_G0017875.1 mouse_genomes_project 11 3425211 3427347 - MGP_NODShiLtJ_P0027742 Ddx56 protein_coding protein_coding MGP_NODShiLtJ_T0027743.1 MGP_NODShiLtJ_G0017875.1 mouse_genomes_project 11 3426620 3427321 - Ddx56 protein_coding retained_intron MGP_NODShiLtJ_T0012553.1 MGP_NODShiLtJ_G0010661.1 mouse_genomes_project 11 84401702 84403645 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012645.1 MGP_NODShiLtJ_G0010753.1 mouse_genomes_project 11 119589752 119590176 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017104.1 MGP_NODShiLtJ_G0015062.1 mouse_genomes_project 11 92816376 92818067 + 4930502E09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0101045.1 MGP_NODShiLtJ_G0039416.1 mouse_genomes_project 11 129308314 129309390 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101046.1 MGP_NODShiLtJ_G0039416.1 mouse_genomes_project 11 129308373 129308800 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0012554.1 MGP_NODShiLtJ_G0010662.1 mouse_genomes_project 11 84403316 84403620 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033836.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132590701 132593443 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033837.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591159 132593110 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033838.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591273 132593436 - MGP_NODShiLtJ_P0033838 Arl16 protein_coding protein_coding MGP_NODShiLtJ_T0033839.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591426 132593301 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033840.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591433 132593170 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033841.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591448 132593256 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033842.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591589 132593317 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033843.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591603 132593257 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033844.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591605 132593232 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033845.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132591750 132593269 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0033846.1 MGP_NODShiLtJ_G0019360.1 mouse_genomes_project 11 132592740 132593289 - Arl16 protein_coding processed_transcript MGP_NODShiLtJ_T0032055.1 MGP_NODShiLtJ_G0018975.1 mouse_genomes_project 11 109772444 109773398 - MGP_NODShiLtJ_P0032055 Krtap4-16 protein_coding protein_coding MGP_NODShiLtJ_T0032860.1 MGP_NODShiLtJ_G0019163.1 mouse_genomes_project 11 117308889 117378702 - MGP_NODShiLtJ_P0032860 Pecam1 protein_coding protein_coding MGP_NODShiLtJ_T0032861.1 MGP_NODShiLtJ_G0019163.1 mouse_genomes_project 11 117308894 117378912 - MGP_NODShiLtJ_P0032861 Pecam1 protein_coding protein_coding MGP_NODShiLtJ_T0032862.1 MGP_NODShiLtJ_G0019163.1 mouse_genomes_project 11 117315853 117318848 - Pecam1 protein_coding retained_intron MGP_NODShiLtJ_T0032863.1 MGP_NODShiLtJ_G0019163.1 mouse_genomes_project 11 117316475 117421373 - MGP_NODShiLtJ_P0032863 Pecam1 protein_coding protein_coding MGP_NODShiLtJ_T0032864.1 MGP_NODShiLtJ_G0019163.1 mouse_genomes_project 11 117347557 117351324 - Pecam1 protein_coding retained_intron MGP_NODShiLtJ_T0032865.1 MGP_NODShiLtJ_G0019163.1 mouse_genomes_project 11 117351059 117378596 - MGP_NODShiLtJ_P0032865 Pecam1 protein_coding protein_coding MGP_NODShiLtJ_T0028947.1 MGP_NODShiLtJ_G0018179.1 mouse_genomes_project 11 60177057 60206155 - MGP_NODShiLtJ_P0028947 Slc36a3 protein_coding protein_coding MGP_NODShiLtJ_T0028948.1 MGP_NODShiLtJ_G0018179.1 mouse_genomes_project 11 60177067 60206133 - MGP_NODShiLtJ_P0028948 Slc36a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028949.1 MGP_NODShiLtJ_G0018179.1 mouse_genomes_project 11 60203937 60206155 - MGP_NODShiLtJ_P0028949 Slc36a3 protein_coding protein_coding MGP_NODShiLtJ_T0098704.1 MGP_NODShiLtJ_G0037098.1 mouse_genomes_project 11 90330718 90330825 - Gm24612 snRNA snRNA MGP_NODShiLtJ_T0029538.1 MGP_NODShiLtJ_G0018339.1 mouse_genomes_project 11 73540520 73593425 + MGP_NODShiLtJ_P0029538 protein_coding protein_coding MGP_NODShiLtJ_T0029539.1 MGP_NODShiLtJ_G0018339.1 mouse_genomes_project 11 73540642 73593425 + MGP_NODShiLtJ_P0029539 protein_coding protein_coding MGP_NODShiLtJ_T0029540.1 MGP_NODShiLtJ_G0018339.1 mouse_genomes_project 11 73542505 73593430 + MGP_NODShiLtJ_P0029540 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029541.1 MGP_NODShiLtJ_G0018339.1 mouse_genomes_project 11 73546592 73593341 + MGP_NODShiLtJ_P0029541 protein_coding protein_coding MGP_NODShiLtJ_T0029542.1 MGP_NODShiLtJ_G0018339.1 mouse_genomes_project 11 73585137 73591038 + MGP_NODShiLtJ_P0029542 protein_coding protein_coding MGP_NODShiLtJ_T0032564.1 MGP_NODShiLtJ_G0019092.1 mouse_genomes_project 11 112832051 112835111 - MGP_NODShiLtJ_P0032564 Gm11627 protein_coding protein_coding MGP_NODShiLtJ_T0032565.1 MGP_NODShiLtJ_G0019092.1 mouse_genomes_project 11 112832097 112834925 - Gm11627 protein_coding processed_transcript MGP_NODShiLtJ_T0032566.1 MGP_NODShiLtJ_G0019092.1 mouse_genomes_project 11 112832144 112834769 - MGP_NODShiLtJ_P0032566 Gm11627 protein_coding protein_coding MGP_NODShiLtJ_T0032401.1 MGP_NODShiLtJ_G0019067.1 mouse_genomes_project 11 112167832 112172398 - MGP_NODShiLtJ_P0032401 Sost protein_coding protein_coding MGP_NODShiLtJ_T0030855.1 MGP_NODShiLtJ_G0018644.1 mouse_genomes_project 11 86792411 86793145 - MGP_NODShiLtJ_P0030855 Gm9964 protein_coding protein_coding MGP_NODShiLtJ_T0012401.1 MGP_NODShiLtJ_G0010509.1 mouse_genomes_project 11 21222499 21222830 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032769.1 MGP_NODShiLtJ_G0019138.1 mouse_genomes_project 11 115874535 115968648 - MGP_NODShiLtJ_P0032769 March10 protein_coding protein_coding MGP_NODShiLtJ_T0032770.1 MGP_NODShiLtJ_G0019138.1 mouse_genomes_project 11 115877481 115885247 - March10 protein_coding processed_transcript MGP_NODShiLtJ_T0032771.1 MGP_NODShiLtJ_G0019138.1 mouse_genomes_project 11 115912378 115924264 - MGP_NODShiLtJ_P0032771 March10 protein_coding protein_coding MGP_NODShiLtJ_T0032772.1 MGP_NODShiLtJ_G0019138.1 mouse_genomes_project 11 115917339 115970987 - MGP_NODShiLtJ_P0032772 March10 protein_coding protein_coding MGP_NODShiLtJ_T0031322.1 MGP_NODShiLtJ_G0018764.1 mouse_genomes_project 11 96146432 96158688 - MGP_NODShiLtJ_P0031322 Epx protein_coding protein_coding MGP_NODShiLtJ_T0031323.1 MGP_NODShiLtJ_G0018764.1 mouse_genomes_project 11 96152553 96154956 - Epx protein_coding processed_transcript MGP_NODShiLtJ_T0028267.1 MGP_NODShiLtJ_G0017996.1 mouse_genomes_project 11 34919951 34953341 - MGP_NODShiLtJ_P0028267 Fgf18 protein_coding protein_coding MGP_NODShiLtJ_T0028268.1 MGP_NODShiLtJ_G0017996.1 mouse_genomes_project 11 34919951 34953946 - MGP_NODShiLtJ_P0028268 Fgf18 protein_coding protein_coding MGP_NODShiLtJ_T0012442.1 MGP_NODShiLtJ_G0010550.1 mouse_genomes_project 11 37159909 37160376 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011691.1 MGP_NODShiLtJ_G0009821.1 mouse_genomes_project 11 127974124 127977898 + MGP_NODShiLtJ_P0011691 Cdk3-ps polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011692.1 MGP_NODShiLtJ_G0009821.1 mouse_genomes_project 11 127974607 127975306 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_NODShiLtJ_T0011693.1 MGP_NODShiLtJ_G0009821.1 mouse_genomes_project 11 127974661 127978409 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_NODShiLtJ_T0027808.1 MGP_NODShiLtJ_G0017890.1 mouse_genomes_project 11 4512398 4517057 + MGP_NODShiLtJ_P0027808 Igfbp1 protein_coding protein_coding MGP_NODShiLtJ_T0009579.1 MGP_NODShiLtJ_G0007712.1 mouse_genomes_project 11 50042720 50042841 + Mir8100 miRNA miRNA MGP_NODShiLtJ_T0011207.1 MGP_NODShiLtJ_G0009340.1 mouse_genomes_project 11 128644623 128644796 - Gm27401 misc_RNA misc_RNA MGP_NODShiLtJ_T0029943.1 MGP_NODShiLtJ_G0018426.1 mouse_genomes_project 11 76480321 76485547 - MGP_NODShiLtJ_P0029943 Acadvl protein_coding protein_coding MGP_NODShiLtJ_T0029944.1 MGP_NODShiLtJ_G0018426.1 mouse_genomes_project 11 76480327 76481050 - Acadvl protein_coding retained_intron MGP_NODShiLtJ_T0029945.1 MGP_NODShiLtJ_G0018426.1 mouse_genomes_project 11 76480382 76485526 - MGP_NODShiLtJ_P0029945 Acadvl protein_coding protein_coding MGP_NODShiLtJ_T0029946.1 MGP_NODShiLtJ_G0018426.1 mouse_genomes_project 11 76481360 76482713 - Acadvl protein_coding retained_intron MGP_NODShiLtJ_T0029947.1 MGP_NODShiLtJ_G0018426.1 mouse_genomes_project 11 76483327 76485516 - Acadvl protein_coding retained_intron MGP_NODShiLtJ_T0029948.1 MGP_NODShiLtJ_G0018426.1 mouse_genomes_project 11 76484181 76485550 - Acadvl protein_coding retained_intron MGP_NODShiLtJ_T0029949.1 MGP_NODShiLtJ_G0018426.1 mouse_genomes_project 11 76484256 76485538 - Acadvl protein_coding retained_intron MGP_NODShiLtJ_T0012579.1 MGP_NODShiLtJ_G0010687.1 mouse_genomes_project 11 93153270 93154121 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028652.1 MGP_NODShiLtJ_G0018104.1 mouse_genomes_project 11 55356807 55378501 - MGP_NODShiLtJ_P0028652 Zfp354c protein_coding protein_coding MGP_NODShiLtJ_T0028653.1 MGP_NODShiLtJ_G0018104.1 mouse_genomes_project 11 55360280 55377270 - MGP_NODShiLtJ_P0028653 Zfp354c protein_coding protein_coding MGP_NODShiLtJ_T0028654.1 MGP_NODShiLtJ_G0018104.1 mouse_genomes_project 11 55362949 55378497 - Zfp354c protein_coding processed_transcript MGP_NODShiLtJ_T0028655.1 MGP_NODShiLtJ_G0018104.1 mouse_genomes_project 11 55377087 55378535 - Zfp354c protein_coding processed_transcript MGP_NODShiLtJ_T0031018.1 MGP_NODShiLtJ_G0018692.1 mouse_genomes_project 11 91129712 91142813 - MGP_NODShiLtJ_P0031018 Slfn14 protein_coding protein_coding MGP_NODShiLtJ_T0011184.1 MGP_NODShiLtJ_G0009317.1 mouse_genomes_project 11 531412 531559 - Gm27640 misc_RNA misc_RNA MGP_NODShiLtJ_T0012546.1 MGP_NODShiLtJ_G0010654.1 mouse_genomes_project 11 80670451 80670648 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028275.1 MGP_NODShiLtJ_G0017999.1 mouse_genomes_project 11 35027264 35171548 - MGP_NODShiLtJ_P0028275 Ranbp17 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028276.1 MGP_NODShiLtJ_G0017999.1 mouse_genomes_project 11 35027268 35390691 - MGP_NODShiLtJ_P0028276 Ranbp17 protein_coding protein_coding MGP_NODShiLtJ_T0028279.1 MGP_NODShiLtJ_G0017999.1 mouse_genomes_project 11 35123261 35390588 - MGP_NODShiLtJ_P0028279 Ranbp17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028280.1 MGP_NODShiLtJ_G0017999.1 mouse_genomes_project 11 35130384 35161414 - Ranbp17 protein_coding processed_transcript MGP_NODShiLtJ_T0028281.1 MGP_NODShiLtJ_G0017999.1 mouse_genomes_project 11 35331879 35390576 - MGP_NODShiLtJ_P0028281 Ranbp17 protein_coding protein_coding MGP_NODShiLtJ_T0028282.1 MGP_NODShiLtJ_G0017999.1 mouse_genomes_project 11 35349479 35390035 - MGP_NODShiLtJ_P0028282 Ranbp17 protein_coding protein_coding MGP_NODShiLtJ_T0031494.1 MGP_NODShiLtJ_G0018807.1 mouse_genomes_project 11 103741780 103747966 - Spata20 protein_coding processed_transcript MGP_NODShiLtJ_T0031495.1 MGP_NODShiLtJ_G0018807.1 mouse_genomes_project 11 103741780 103748213 - MGP_NODShiLtJ_P0031495 Spata20 protein_coding protein_coding MGP_NODShiLtJ_T0031496.1 MGP_NODShiLtJ_G0018807.1 mouse_genomes_project 11 103745947 103747277 - Spata20 protein_coding processed_transcript MGP_NODShiLtJ_T0031497.1 MGP_NODShiLtJ_G0018807.1 mouse_genomes_project 11 103746217 103747964 - Spata20 protein_coding processed_transcript MGP_NODShiLtJ_T0031498.1 MGP_NODShiLtJ_G0018807.1 mouse_genomes_project 11 103747472 103749036 - Spata20 protein_coding processed_transcript MGP_NODShiLtJ_T0030386.1 MGP_NODShiLtJ_G0018541.1 mouse_genomes_project 11 81398551 81399546 + MGP_NODShiLtJ_P0030386 Olfr412 protein_coding protein_coding MGP_NODShiLtJ_T0030961.1 MGP_NODShiLtJ_G0018675.1 mouse_genomes_project 11 89875939 90008535 - Ccl1 protein_coding processed_transcript MGP_NODShiLtJ_T0030962.1 MGP_NODShiLtJ_G0018675.1 mouse_genomes_project 11 89875939 89879097 - MGP_NODShiLtJ_P0030962 Ccl1 protein_coding protein_coding MGP_NODShiLtJ_T0030963.1 MGP_NODShiLtJ_G0018675.1 mouse_genomes_project 11 89875941 89879097 - MGP_NODShiLtJ_P0030963 Ccl1 protein_coding protein_coding MGP_NODShiLtJ_T0098712.1 MGP_NODShiLtJ_G0037106.1 mouse_genomes_project 11 95639088 95640586 + Gm22068 snRNA snRNA MGP_NODShiLtJ_T0027504.1 MGP_NODShiLtJ_G0017820.1 mouse_genomes_project 11 589442 754236 - MGP_NODShiLtJ_P0027504 Osbp2 protein_coding protein_coding MGP_NODShiLtJ_T0027505.1 MGP_NODShiLtJ_G0017820.1 mouse_genomes_project 11 589629 609072 - MGP_NODShiLtJ_P0027505 Osbp2 protein_coding protein_coding MGP_NODShiLtJ_T0027506.1 MGP_NODShiLtJ_G0017820.1 mouse_genomes_project 11 590778 754086 - MGP_NODShiLtJ_P0027506 Osbp2 protein_coding protein_coding MGP_NODShiLtJ_T0027507.1 MGP_NODShiLtJ_G0017820.1 mouse_genomes_project 11 604708 661879 - MGP_NODShiLtJ_P0027507 Osbp2 protein_coding protein_coding MGP_NODShiLtJ_T0027508.1 MGP_NODShiLtJ_G0017820.1 mouse_genomes_project 11 604768 662832 - MGP_NODShiLtJ_P0027508 Osbp2 protein_coding protein_coding MGP_NODShiLtJ_T0027509.1 MGP_NODShiLtJ_G0017820.1 mouse_genomes_project 11 611257 754236 - Osbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0009590.1 MGP_NODShiLtJ_G0007723.1 mouse_genomes_project 11 59655322 59655399 - Gm26116 miRNA miRNA MGP_NODShiLtJ_T0097896.1 MGP_NODShiLtJ_G0036308.1 mouse_genomes_project 11 81337285 81337404 + n-R5s71 rRNA rRNA MGP_NODShiLtJ_T0031288.1 MGP_NODShiLtJ_G0018758.1 mouse_genomes_project 11 95913955 95983823 + Rnf43 protein_coding retained_intron MGP_NODShiLtJ_T0031289.1 MGP_NODShiLtJ_G0018758.1 mouse_genomes_project 11 95914320 95972351 + Rnf43 protein_coding processed_transcript MGP_NODShiLtJ_T0031290.1 MGP_NODShiLtJ_G0018758.1 mouse_genomes_project 11 95915782 95988429 + MGP_NODShiLtJ_P0031290 Rnf43 protein_coding protein_coding MGP_NODShiLtJ_T0031291.1 MGP_NODShiLtJ_G0018758.1 mouse_genomes_project 11 95915849 95988088 + MGP_NODShiLtJ_P0031291 Rnf43 protein_coding protein_coding MGP_NODShiLtJ_T0031292.1 MGP_NODShiLtJ_G0018758.1 mouse_genomes_project 11 95981317 95984415 + Rnf43 protein_coding retained_intron MGP_NODShiLtJ_T0031293.1 MGP_NODShiLtJ_G0018758.1 mouse_genomes_project 11 95983262 95985002 + Rnf43 protein_coding retained_intron MGP_NODShiLtJ_T0031294.1 MGP_NODShiLtJ_G0018758.1 mouse_genomes_project 11 95987808 95988357 + Rnf43 protein_coding processed_transcript MGP_NODShiLtJ_T0032615.1 MGP_NODShiLtJ_G0019105.1 mouse_genomes_project 11 113282364 113305359 - MGP_NODShiLtJ_P0032615 Dcakd protein_coding protein_coding MGP_NODShiLtJ_T0032616.1 MGP_NODShiLtJ_G0019105.1 mouse_genomes_project 11 113282366 113285866 - Dcakd protein_coding retained_intron MGP_NODShiLtJ_T0032617.1 MGP_NODShiLtJ_G0019105.1 mouse_genomes_project 11 113287961 113317574 - MGP_NODShiLtJ_P0032617 Dcakd protein_coding protein_coding MGP_NODShiLtJ_T0032618.1 MGP_NODShiLtJ_G0019105.1 mouse_genomes_project 11 113316257 113317533 - Dcakd protein_coding retained_intron MGP_NODShiLtJ_T0032619.1 MGP_NODShiLtJ_G0019105.1 mouse_genomes_project 11 113316531 113317603 - Dcakd protein_coding processed_transcript MGP_NODShiLtJ_T0006134.1 MGP_NODShiLtJ_G0005121.1 mouse_genomes_project 11 25187293 25218093 - Gm12665 lincRNA lincRNA MGP_NODShiLtJ_T0006135.1 MGP_NODShiLtJ_G0005121.1 mouse_genomes_project 11 25187293 25218101 - Gm12665 lincRNA lincRNA MGP_NODShiLtJ_T0028434.1 MGP_NODShiLtJ_G0018041.1 mouse_genomes_project 11 49876561 49885227 - MGP_NODShiLtJ_P0028434 Thg1l protein_coding protein_coding MGP_NODShiLtJ_T0028435.1 MGP_NODShiLtJ_G0018041.1 mouse_genomes_project 11 49876561 49884921 - MGP_NODShiLtJ_P0028435 Thg1l protein_coding protein_coding MGP_NODShiLtJ_T0028436.1 MGP_NODShiLtJ_G0018041.1 mouse_genomes_project 11 49879924 49884149 - Thg1l protein_coding processed_transcript MGP_NODShiLtJ_T0028437.1 MGP_NODShiLtJ_G0018041.1 mouse_genomes_project 11 49880906 49884890 - Thg1l protein_coding processed_transcript MGP_NODShiLtJ_T0028438.1 MGP_NODShiLtJ_G0018041.1 mouse_genomes_project 11 49883999 49885216 - Thg1l protein_coding processed_transcript MGP_NODShiLtJ_T0012425.1 MGP_NODShiLtJ_G0010533.1 mouse_genomes_project 11 31441469 31442285 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030801.1 MGP_NODShiLtJ_G0018629.1 mouse_genomes_project 11 85930835 85955921 - MGP_NODShiLtJ_P0030801 Sarm1 protein_coding protein_coding MGP_NODShiLtJ_T0030802.1 MGP_NODShiLtJ_G0018629.1 mouse_genomes_project 11 85931718 85942265 - Sarm1 protein_coding retained_intron MGP_NODShiLtJ_T0030803.1 MGP_NODShiLtJ_G0018629.1 mouse_genomes_project 11 85931796 85956221 - MGP_NODShiLtJ_P0030803 Sarm1 protein_coding protein_coding MGP_NODShiLtJ_T0030804.1 MGP_NODShiLtJ_G0018629.1 mouse_genomes_project 11 85941300 85945762 - Sarm1 protein_coding retained_intron MGP_NODShiLtJ_T0030805.1 MGP_NODShiLtJ_G0018629.1 mouse_genomes_project 11 85949421 85956153 - Sarm1 protein_coding processed_transcript MGP_NODShiLtJ_T0028644.1 MGP_NODShiLtJ_G0018102.1 mouse_genomes_project 11 54918182 54965251 - MGP_NODShiLtJ_P0028644 Rufy1 protein_coding protein_coding MGP_NODShiLtJ_T0028645.1 MGP_NODShiLtJ_G0018102.1 mouse_genomes_project 11 54918269 54947621 - Rufy1 protein_coding processed_transcript MGP_NODShiLtJ_T0028646.1 MGP_NODShiLtJ_G0018102.1 mouse_genomes_project 11 54938522 54956096 - Rufy1 protein_coding processed_transcript MGP_NODShiLtJ_T0099910.1 MGP_NODShiLtJ_G0038304.1 mouse_genomes_project 11 22834800 22834902 + Gm23772 snoRNA snoRNA MGP_NODShiLtJ_T0028883.1 MGP_NODShiLtJ_G0018166.1 mouse_genomes_project 11 59223421 59225396 - MGP_NODShiLtJ_P0028883 Il3 protein_coding protein_coding MGP_NODShiLtJ_T0033390.1 MGP_NODShiLtJ_G0019272.1 mouse_genomes_project 11 127874330 127883834 - MGP_NODShiLtJ_P0033390 Trim65 protein_coding protein_coding MGP_NODShiLtJ_T0033391.1 MGP_NODShiLtJ_G0019272.1 mouse_genomes_project 11 127877192 127883838 - Trim65 protein_coding processed_transcript MGP_NODShiLtJ_T0033392.1 MGP_NODShiLtJ_G0019272.1 mouse_genomes_project 11 127877192 127883836 - MGP_NODShiLtJ_P0033392 Trim65 protein_coding protein_coding MGP_NODShiLtJ_T0012391.1 MGP_NODShiLtJ_G0010499.1 mouse_genomes_project 11 20203634 20204257 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009588.1 MGP_NODShiLtJ_G0007721.1 mouse_genomes_project 11 58283694 58283765 + Mir6920 miRNA miRNA MGP_NODShiLtJ_T0033169.1 MGP_NODShiLtJ_G0019233.1 mouse_genomes_project 11 126923219 126939468 - MGP_NODShiLtJ_P0033169 Grin2c protein_coding protein_coding MGP_NODShiLtJ_T0033170.1 MGP_NODShiLtJ_G0019233.1 mouse_genomes_project 11 126923219 126941282 - MGP_NODShiLtJ_P0033170 Grin2c protein_coding protein_coding MGP_NODShiLtJ_T0012511.1 MGP_NODShiLtJ_G0010619.1 mouse_genomes_project 11 66022086 66022847 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030097.1 MGP_NODShiLtJ_G0018457.1 mouse_genomes_project 11 77210933 77213725 - MGP_NODShiLtJ_P0030097 Pfn1 protein_coding protein_coding MGP_NODShiLtJ_T0030098.1 MGP_NODShiLtJ_G0018457.1 mouse_genomes_project 11 77211019 77213702 - MGP_NODShiLtJ_P0030098 Pfn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030099.1 MGP_NODShiLtJ_G0018457.1 mouse_genomes_project 11 77211692 77213689 - Pfn1 protein_coding retained_intron MGP_NODShiLtJ_T0030100.1 MGP_NODShiLtJ_G0018457.1 mouse_genomes_project 11 77211702 77213679 - MGP_NODShiLtJ_P0030100 Pfn1 protein_coding protein_coding MGP_NODShiLtJ_T0029806.1 MGP_NODShiLtJ_G0018396.1 mouse_genomes_project 11 76089544 76110871 - MGP_NODShiLtJ_P0029806 Tnfsfm13 protein_coding protein_coding MGP_NODShiLtJ_T0029809.1 MGP_NODShiLtJ_G0018396.1 mouse_genomes_project 11 76090015 76104863 - MGP_NODShiLtJ_P0029809 Tnfsfm13 protein_coding protein_coding MGP_NODShiLtJ_T0029810.1 MGP_NODShiLtJ_G0018396.1 mouse_genomes_project 11 76090198 76104862 - MGP_NODShiLtJ_P0029810 Tnfsfm13 protein_coding protein_coding MGP_NODShiLtJ_T0031161.1 MGP_NODShiLtJ_G0018728.1 mouse_genomes_project 11 93221770 93231985 + MGP_NODShiLtJ_P0031161 1700125H20Rik protein_coding protein_coding MGP_NODShiLtJ_T0031162.1 MGP_NODShiLtJ_G0018728.1 mouse_genomes_project 11 93222462 93231985 + MGP_NODShiLtJ_P0031162 1700125H20Rik protein_coding protein_coding MGP_NODShiLtJ_T0009685.1 MGP_NODShiLtJ_G0007818.1 mouse_genomes_project 11 132455006 132455060 - Mir6935 miRNA miRNA MGP_NODShiLtJ_T0101548.1 MGP_NODShiLtJ_G0039718.1 mouse_genomes_project 11 64419247 64419658 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011686.1 MGP_NODShiLtJ_G0009817.1 mouse_genomes_project 11 80836508 80841466 + MGP_NODShiLtJ_P0011686 Olfr396-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011687.1 MGP_NODShiLtJ_G0009817.1 mouse_genomes_project 11 80840746 80841379 + MGP_NODShiLtJ_P0011687 Olfr396-ps1 polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0006111.1 MGP_NODShiLtJ_G0005099.1 mouse_genomes_project 11 13219533 13278704 - lincRNA lincRNA MGP_NODShiLtJ_T0009666.1 MGP_NODShiLtJ_G0007799.1 mouse_genomes_project 11 116130993 116131110 + Gm23990 miRNA miRNA MGP_NODShiLtJ_T0031541.1 MGP_NODShiLtJ_G0018820.1 mouse_genomes_project 11 104329892 104346658 + MGP_NODShiLtJ_P0031541 Col1a1 protein_coding protein_coding MGP_NODShiLtJ_T0031542.1 MGP_NODShiLtJ_G0018820.1 mouse_genomes_project 11 104331355 104331773 + Col1a1 protein_coding processed_transcript MGP_NODShiLtJ_T0031543.1 MGP_NODShiLtJ_G0018820.1 mouse_genomes_project 11 104332681 104333411 + Col1a1 protein_coding retained_intron MGP_NODShiLtJ_T0031544.1 MGP_NODShiLtJ_G0018820.1 mouse_genomes_project 11 104339036 104339698 + Col1a1 protein_coding retained_intron MGP_NODShiLtJ_T0029074.1 MGP_NODShiLtJ_G0018237.1 mouse_genomes_project 11 64436584 64450689 + MGP_NODShiLtJ_P0029074 Trim11 protein_coding protein_coding MGP_NODShiLtJ_T0029075.1 MGP_NODShiLtJ_G0018237.1 mouse_genomes_project 11 64436606 64450692 + MGP_NODShiLtJ_P0029075 Trim11 protein_coding protein_coding MGP_NODShiLtJ_T0029076.1 MGP_NODShiLtJ_G0018237.1 mouse_genomes_project 11 64436607 64450691 + MGP_NODShiLtJ_P0029076 Trim11 protein_coding protein_coding MGP_NODShiLtJ_T0006190.1 MGP_NODShiLtJ_G0005169.1 mouse_genomes_project 11 69025386 69043165 + B430319H21Rik lincRNA lincRNA MGP_NODShiLtJ_T0028739.1 MGP_NODShiLtJ_G0018129.1 mouse_genomes_project 11 56669049 56681556 + MGP_NODShiLtJ_P0028739 Cdkn2aipnl protein_coding protein_coding MGP_NODShiLtJ_T0028740.1 MGP_NODShiLtJ_G0018129.1 mouse_genomes_project 11 56669280 56680466 + MGP_NODShiLtJ_P0028740 Cdkn2aipnl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003258.1 MGP_NODShiLtJ_G0003005.1 mouse_genomes_project 11 114624300 114632796 - Gm11659 antisense antisense MGP_NODShiLtJ_T0034033.1 MGP_NODShiLtJ_G0019399.1 mouse_genomes_project 11 133421726 133428446 - MGP_NODShiLtJ_P0034033 BC017643 protein_coding protein_coding MGP_NODShiLtJ_T0034034.1 MGP_NODShiLtJ_G0019399.1 mouse_genomes_project 11 133421726 133428442 - MGP_NODShiLtJ_P0034034 BC017643 protein_coding protein_coding MGP_NODShiLtJ_T0034035.1 MGP_NODShiLtJ_G0019399.1 mouse_genomes_project 11 133422802 133427923 - BC017643 protein_coding retained_intron MGP_NODShiLtJ_T0034036.1 MGP_NODShiLtJ_G0019399.1 mouse_genomes_project 11 133423085 133426519 - BC017643 protein_coding retained_intron MGP_NODShiLtJ_T0034037.1 MGP_NODShiLtJ_G0019399.1 mouse_genomes_project 11 133423364 133428232 - MGP_NODShiLtJ_P0034037 BC017643 protein_coding protein_coding MGP_NODShiLtJ_T0034038.1 MGP_NODShiLtJ_G0019399.1 mouse_genomes_project 11 133423708 133428372 - MGP_NODShiLtJ_P0034038 BC017643 protein_coding protein_coding MGP_NODShiLtJ_T0034039.1 MGP_NODShiLtJ_G0019399.1 mouse_genomes_project 11 133423735 133428459 - MGP_NODShiLtJ_P0034039 BC017643 protein_coding protein_coding MGP_NODShiLtJ_T0034040.1 MGP_NODShiLtJ_G0019399.1 mouse_genomes_project 11 133425907 133428360 - BC017643 protein_coding processed_transcript MGP_NODShiLtJ_T0030954.1 MGP_NODShiLtJ_G0018670.1 mouse_genomes_project 11 89720512 89722395 + MGP_NODShiLtJ_P0030954 Ccl2 protein_coding protein_coding MGP_NODShiLtJ_T0030955.1 MGP_NODShiLtJ_G0018670.1 mouse_genomes_project 11 89720551 89722392 + Ccl2 protein_coding retained_intron MGP_NODShiLtJ_T0009570.1 MGP_NODShiLtJ_G0007703.1 mouse_genomes_project 11 29995535 29995621 + Mir216b miRNA miRNA MGP_NODShiLtJ_T0030273.1 MGP_NODShiLtJ_G0018493.1 mouse_genomes_project 11 79550359 79569968 - MGP_NODShiLtJ_P0030273 Cyb5d2 protein_coding protein_coding MGP_NODShiLtJ_T0030274.1 MGP_NODShiLtJ_G0018493.1 mouse_genomes_project 11 79551866 79569814 - MGP_NODShiLtJ_P0030274 Cyb5d2 protein_coding protein_coding MGP_NODShiLtJ_T0030275.1 MGP_NODShiLtJ_G0018493.1 mouse_genomes_project 11 79552005 79570206 - Cyb5d2 protein_coding processed_transcript MGP_NODShiLtJ_T0030276.1 MGP_NODShiLtJ_G0018493.1 mouse_genomes_project 11 79567000 79569953 - Cyb5d2 protein_coding retained_intron MGP_NODShiLtJ_T0032316.1 MGP_NODShiLtJ_G0019048.1 mouse_genomes_project 11 111422274 111426914 + MGP_NODShiLtJ_P0032316 Aoc2 protein_coding protein_coding MGP_NODShiLtJ_T0032317.1 MGP_NODShiLtJ_G0019048.1 mouse_genomes_project 11 111422298 111426706 + MGP_NODShiLtJ_P0032317 Aoc2 protein_coding protein_coding MGP_NODShiLtJ_T0030483.1 MGP_NODShiLtJ_G0018564.1 mouse_genomes_project 11 82672014 82685521 + MGP_NODShiLtJ_P0030483 Scarf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030484.1 MGP_NODShiLtJ_G0018564.1 mouse_genomes_project 11 82672017 82685523 + MGP_NODShiLtJ_P0030484 Scarf1 protein_coding protein_coding MGP_NODShiLtJ_T0101540.1 MGP_NODShiLtJ_G0039710.1 mouse_genomes_project 11 50530904 50531204 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0033427.1 MGP_NODShiLtJ_G0019279.1 mouse_genomes_project 11 128042601 128045601 + MGP_NODShiLtJ_P0033427 Galr2 protein_coding protein_coding MGP_NODShiLtJ_T0033428.1 MGP_NODShiLtJ_G0019279.1 mouse_genomes_project 11 128043148 128045324 + Galr2 protein_coding processed_transcript MGP_NODShiLtJ_T0017016.1 MGP_NODShiLtJ_G0015016.1 mouse_genomes_project 11 148227 162541 + Gm11944 processed_transcript processed_transcript MGP_NODShiLtJ_T0028812.1 MGP_NODShiLtJ_G0018149.1 mouse_genomes_project 11 58361261 58362195 + MGP_NODShiLtJ_P0028812 Gm9945 protein_coding protein_coding MGP_NODShiLtJ_T0032628.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113385319 113397771 + MGP_NODShiLtJ_P0032628 Acbd4 protein_coding protein_coding MGP_NODShiLtJ_T0032629.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113385319 113397774 + MGP_NODShiLtJ_P0032629 Acbd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032630.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113385323 113387659 + Acbd4 protein_coding processed_transcript MGP_NODShiLtJ_T0032631.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113385323 113389035 + MGP_NODShiLtJ_P0032631 Acbd4 protein_coding protein_coding MGP_NODShiLtJ_T0032632.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113385325 113397773 + MGP_NODShiLtJ_P0032632 Acbd4 protein_coding protein_coding MGP_NODShiLtJ_T0032633.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113385346 113387023 + Acbd4 protein_coding retained_intron MGP_NODShiLtJ_T0032634.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113385349 113387817 + MGP_NODShiLtJ_P0032634 Acbd4 protein_coding protein_coding MGP_NODShiLtJ_T0032635.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113385363 113386861 + Acbd4 protein_coding retained_intron MGP_NODShiLtJ_T0032636.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113386658 113389109 + MGP_NODShiLtJ_P0032636 Acbd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032637.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113386711 113389094 + Acbd4 protein_coding processed_transcript MGP_NODShiLtJ_T0032638.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113386713 113388489 + MGP_NODShiLtJ_P0032638 Acbd4 protein_coding protein_coding MGP_NODShiLtJ_T0032639.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113386745 113387736 + Acbd4 protein_coding retained_intron MGP_NODShiLtJ_T0032640.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113386889 113388125 + Acbd4 protein_coding retained_intron MGP_NODShiLtJ_T0032641.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113388347 113397527 + Acbd4 protein_coding retained_intron MGP_NODShiLtJ_T0032642.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113389825 113397313 + Acbd4 protein_coding processed_transcript MGP_NODShiLtJ_T0032643.1 MGP_NODShiLtJ_G0019108.1 mouse_genomes_project 11 113389846 113397771 + Acbd4 protein_coding processed_transcript MGP_NODShiLtJ_T0027997.1 MGP_NODShiLtJ_G0017937.1 mouse_genomes_project 11 22822895 22849157 - MGP_NODShiLtJ_P0027997 B3gnt2 protein_coding protein_coding MGP_NODShiLtJ_T0027998.1 MGP_NODShiLtJ_G0017937.1 mouse_genomes_project 11 22823013 22849544 - MGP_NODShiLtJ_P0027998 B3gnt2 protein_coding protein_coding MGP_NODShiLtJ_T0027999.1 MGP_NODShiLtJ_G0017937.1 mouse_genomes_project 11 22824731 22850018 - MGP_NODShiLtJ_P0027999 B3gnt2 protein_coding protein_coding MGP_NODShiLtJ_T0030418.1 MGP_NODShiLtJ_G0018549.1 mouse_genomes_project 11 82013607 82025207 + MGP_NODShiLtJ_P0030418 Tsr1 protein_coding protein_coding MGP_NODShiLtJ_T0030419.1 MGP_NODShiLtJ_G0018549.1 mouse_genomes_project 11 82013627 82017720 + Tsr1 protein_coding retained_intron MGP_NODShiLtJ_T0030420.1 MGP_NODShiLtJ_G0018549.1 mouse_genomes_project 11 82017577 82019770 + Tsr1 protein_coding retained_intron MGP_NODShiLtJ_T0030421.1 MGP_NODShiLtJ_G0018549.1 mouse_genomes_project 11 82019834 82024179 + MGP_NODShiLtJ_P0030421 Tsr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030422.1 MGP_NODShiLtJ_G0018549.1 mouse_genomes_project 11 82021075 82024208 + Tsr1 protein_coding retained_intron MGP_NODShiLtJ_T0031459.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103525816 103563595 - MGP_NODShiLtJ_P0031459 Luc7l3 protein_coding protein_coding MGP_NODShiLtJ_T0031460.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103529686 103563625 - MGP_NODShiLtJ_P0031460 Luc7l3 protein_coding protein_coding MGP_NODShiLtJ_T0031461.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103529686 103535691 - MGP_NODShiLtJ_P0031461 Luc7l3 protein_coding protein_coding MGP_NODShiLtJ_T0031462.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103529764 103563625 - MGP_NODShiLtJ_P0031462 Luc7l3 protein_coding protein_coding MGP_NODShiLtJ_T0031463.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103529764 103563625 - MGP_NODShiLtJ_P0031463 Luc7l3 protein_coding protein_coding MGP_NODShiLtJ_T0031464.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103529954 103531845 - MGP_NODShiLtJ_P0031464 Luc7l3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031465.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103531395 103563532 - MGP_NODShiLtJ_P0031465 Luc7l3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031466.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103535630 103536842 - Luc7l3 protein_coding retained_intron MGP_NODShiLtJ_T0031467.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103535638 103537648 - Luc7l3 protein_coding processed_transcript MGP_NODShiLtJ_T0031468.1 MGP_NODShiLtJ_G0018803.1 mouse_genomes_project 11 103535679 103538849 - Luc7l3 protein_coding retained_intron MGP_NODShiLtJ_T0012439.1 MGP_NODShiLtJ_G0010547.1 mouse_genomes_project 11 34981518 34981961 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029036.1 MGP_NODShiLtJ_G0018211.1 mouse_genomes_project 11 63905718 63908034 - MGP_NODShiLtJ_P0029036 protein_coding protein_coding MGP_NODShiLtJ_T0032590.1 MGP_NODShiLtJ_G0019098.1 mouse_genomes_project 11 113116477 113118669 + MGP_NODShiLtJ_P0032590 Higd1b protein_coding protein_coding MGP_NODShiLtJ_T0032591.1 MGP_NODShiLtJ_G0019098.1 mouse_genomes_project 11 113116924 113118669 + MGP_NODShiLtJ_P0032591 Higd1b protein_coding protein_coding MGP_NODShiLtJ_T0032592.1 MGP_NODShiLtJ_G0019098.1 mouse_genomes_project 11 113117074 113118669 + MGP_NODShiLtJ_P0032592 Higd1b protein_coding protein_coding MGP_NODShiLtJ_T0033096.1 MGP_NODShiLtJ_G0019213.1 mouse_genomes_project 11 126269207 126295727 + Dnaic2 protein_coding processed_transcript MGP_NODShiLtJ_T0033097.1 MGP_NODShiLtJ_G0019213.1 mouse_genomes_project 11 126269211 126309633 + MGP_NODShiLtJ_P0033097 Dnaic2 protein_coding protein_coding MGP_NODShiLtJ_T0033098.1 MGP_NODShiLtJ_G0019213.1 mouse_genomes_project 11 126269215 126306179 + Dnaic2 protein_coding processed_transcript MGP_NODShiLtJ_T0033099.1 MGP_NODShiLtJ_G0019213.1 mouse_genomes_project 11 126270951 126309633 + MGP_NODShiLtJ_P0033099 Dnaic2 protein_coding protein_coding MGP_NODShiLtJ_T0033100.1 MGP_NODShiLtJ_G0019213.1 mouse_genomes_project 11 126276525 126306289 + MGP_NODShiLtJ_P0033100 Dnaic2 protein_coding protein_coding MGP_NODShiLtJ_T0033101.1 MGP_NODShiLtJ_G0019213.1 mouse_genomes_project 11 126282226 126305896 + Dnaic2 protein_coding processed_transcript MGP_NODShiLtJ_T0033102.1 MGP_NODShiLtJ_G0019213.1 mouse_genomes_project 11 126304502 126308906 + Dnaic2 protein_coding processed_transcript MGP_NODShiLtJ_T0031390.1 MGP_NODShiLtJ_G0018788.1 mouse_genomes_project 11 98860084 98916660 - MGP_NODShiLtJ_P0031390 Hlf protein_coding protein_coding MGP_NODShiLtJ_T0031391.1 MGP_NODShiLtJ_G0018788.1 mouse_genomes_project 11 98862538 98915453 - Hlf protein_coding processed_transcript MGP_NODShiLtJ_T0031392.1 MGP_NODShiLtJ_G0018788.1 mouse_genomes_project 11 98862690 98913965 - Hlf protein_coding processed_transcript MGP_NODShiLtJ_T0031393.1 MGP_NODShiLtJ_G0018788.1 mouse_genomes_project 11 98864375 98907049 - Hlf protein_coding processed_transcript MGP_NODShiLtJ_T0031394.1 MGP_NODShiLtJ_G0018788.1 mouse_genomes_project 11 98869075 98913728 - MGP_NODShiLtJ_P0031394 Hlf protein_coding protein_coding MGP_NODShiLtJ_T0031395.1 MGP_NODShiLtJ_G0018788.1 mouse_genomes_project 11 98913677 98915353 - Hlf protein_coding processed_transcript MGP_NODShiLtJ_T0003302.1 MGP_NODShiLtJ_G0003039.1 mouse_genomes_project 11 129712737 129714154 - Gm11724 antisense antisense MGP_NODShiLtJ_T0101563.1 MGP_NODShiLtJ_G0039733.1 mouse_genomes_project 11 104060181 104060959 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003139.1 MGP_NODShiLtJ_G0002909.1 mouse_genomes_project 11 67207054 67207876 + Gm12272 antisense antisense MGP_NODShiLtJ_T0030987.1 MGP_NODShiLtJ_G0018681.1 mouse_genomes_project 11 90631275 90647098 - MGP_NODShiLtJ_P0030987 Rad51d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030988.1 MGP_NODShiLtJ_G0018681.1 mouse_genomes_project 11 90631540 90647123 - MGP_NODShiLtJ_P0030988 Rad51d protein_coding protein_coding MGP_NODShiLtJ_T0030989.1 MGP_NODShiLtJ_G0018681.1 mouse_genomes_project 11 90633578 90647098 - MGP_NODShiLtJ_P0030989 Rad51d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030990.1 MGP_NODShiLtJ_G0018681.1 mouse_genomes_project 11 90633578 90647098 - MGP_NODShiLtJ_P0030990 Rad51d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030991.1 MGP_NODShiLtJ_G0018681.1 mouse_genomes_project 11 90633578 90647098 - MGP_NODShiLtJ_P0030991 Rad51d protein_coding protein_coding MGP_NODShiLtJ_T0030992.1 MGP_NODShiLtJ_G0018681.1 mouse_genomes_project 11 90633578 90647098 - MGP_NODShiLtJ_P0030992 Rad51d protein_coding protein_coding MGP_NODShiLtJ_T0030399.1 MGP_NODShiLtJ_G0018545.1 mouse_genomes_project 11 81774617 81832636 - Pafah1b1 protein_coding retained_intron MGP_NODShiLtJ_T0030400.1 MGP_NODShiLtJ_G0018545.1 mouse_genomes_project 11 81774617 81832980 - MGP_NODShiLtJ_P0030400 Pafah1b1 protein_coding protein_coding MGP_NODShiLtJ_T0030401.1 MGP_NODShiLtJ_G0018545.1 mouse_genomes_project 11 81774618 81831371 - Pafah1b1 protein_coding retained_intron MGP_NODShiLtJ_T0030402.1 MGP_NODShiLtJ_G0018545.1 mouse_genomes_project 11 81774618 81830911 - MGP_NODShiLtJ_P0030402 Pafah1b1 protein_coding protein_coding MGP_NODShiLtJ_T0030403.1 MGP_NODShiLtJ_G0018545.1 mouse_genomes_project 11 81792955 81830224 - MGP_NODShiLtJ_P0030403 Pafah1b1 protein_coding protein_coding MGP_NODShiLtJ_T0006298.1 MGP_NODShiLtJ_G0005246.1 mouse_genomes_project 11 127324971 127339901 + Gm26613 lincRNA lincRNA MGP_NODShiLtJ_T0029013.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63652030 63660243 - MGP_NODShiLtJ_P0029013 Zfp672 protein_coding protein_coding MGP_NODShiLtJ_T0029014.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63652040 63660220 - MGP_NODShiLtJ_P0029014 Zfp672 protein_coding protein_coding MGP_NODShiLtJ_T0029015.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63652131 63660010 - MGP_NODShiLtJ_P0029015 Zfp672 protein_coding protein_coding MGP_NODShiLtJ_T0029016.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63654140 63667253 - MGP_NODShiLtJ_P0029016 Zfp672 protein_coding protein_coding MGP_NODShiLtJ_T0029017.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63654242 63656859 - MGP_NODShiLtJ_P0029017 Zfp672 protein_coding protein_coding MGP_NODShiLtJ_T0029018.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63656608 63660211 - Zfp672 protein_coding processed_transcript MGP_NODShiLtJ_T0029019.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63656642 63660211 - Zfp672 protein_coding processed_transcript MGP_NODShiLtJ_T0029020.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63664132 63667261 - Zfp672 protein_coding retained_intron MGP_NODShiLtJ_T0029021.1 MGP_NODShiLtJ_G0018202.1 mouse_genomes_project 11 63664637 63667261 - MGP_NODShiLtJ_P0029021 Zfp672 protein_coding protein_coding MGP_NODShiLtJ_T0032707.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114606545 114706026 + MGP_NODShiLtJ_P0032707 protein_coding protein_coding MGP_NODShiLtJ_T0032708.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114606634 114668324 + protein_coding retained_intron MGP_NODShiLtJ_T0032709.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114606639 114679557 + MGP_NODShiLtJ_P0032709 protein_coding protein_coding MGP_NODShiLtJ_T0032710.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114606670 114702374 + MGP_NODShiLtJ_P0032710 protein_coding protein_coding MGP_NODShiLtJ_T0032711.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114606728 114679641 + MGP_NODShiLtJ_P0032711 protein_coding protein_coding MGP_NODShiLtJ_T0032712.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114606734 114679617 + protein_coding processed_transcript MGP_NODShiLtJ_T0032713.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114606736 114667931 + MGP_NODShiLtJ_P0032713 protein_coding protein_coding MGP_NODShiLtJ_T0032714.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114606739 114702158 + MGP_NODShiLtJ_P0032714 protein_coding protein_coding MGP_NODShiLtJ_T0032715.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114655748 114702126 + MGP_NODShiLtJ_P0032715 protein_coding protein_coding MGP_NODShiLtJ_T0032716.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114655748 114702126 + MGP_NODShiLtJ_P0032716 protein_coding protein_coding MGP_NODShiLtJ_T0032717.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114693269 114702180 + protein_coding processed_transcript MGP_NODShiLtJ_T0032718.1 MGP_NODShiLtJ_G0019127.1 mouse_genomes_project 11 114697176 114702149 + protein_coding processed_transcript MGP_NODShiLtJ_T0031472.1 MGP_NODShiLtJ_G0018805.1 mouse_genomes_project 11 103586896 103647707 - MGP_NODShiLtJ_P0031472 Abcc3 protein_coding protein_coding MGP_NODShiLtJ_T0031473.1 MGP_NODShiLtJ_G0018805.1 mouse_genomes_project 11 103586899 103647707 - MGP_NODShiLtJ_P0031473 Abcc3 protein_coding protein_coding MGP_NODShiLtJ_T0031474.1 MGP_NODShiLtJ_G0018805.1 mouse_genomes_project 11 103587256 103594751 - Abcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0031475.1 MGP_NODShiLtJ_G0018805.1 mouse_genomes_project 11 103611467 103616993 - Abcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0031476.1 MGP_NODShiLtJ_G0018805.1 mouse_genomes_project 11 103612112 103647650 - Abcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0031477.1 MGP_NODShiLtJ_G0018805.1 mouse_genomes_project 11 103624606 103647728 - Abcc3 protein_coding processed_transcript MGP_NODShiLtJ_T0017055.1 MGP_NODShiLtJ_G0015035.1 mouse_genomes_project 11 35894330 36019248 - 4930469K13Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0012539.1 MGP_NODShiLtJ_G0010647.1 mouse_genomes_project 11 77332306 77332579 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031703.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106492197 106501268 - MGP_NODShiLtJ_P0031703 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031704.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106492197 106501268 - MGP_NODShiLtJ_P0031704 Cdk5rap3 protein_coding protein_coding MGP_NODShiLtJ_T0031705.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106492587 106493530 - Cdk5rap3 protein_coding retained_intron MGP_NODShiLtJ_T0031706.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106496226 106497640 - Cdk5rap3 protein_coding retained_intron MGP_NODShiLtJ_T0031707.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106496715 106501164 - MGP_NODShiLtJ_P0031707 Cdk5rap3 protein_coding protein_coding MGP_NODShiLtJ_T0031708.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106496732 106500879 - MGP_NODShiLtJ_P0031708 Cdk5rap3 protein_coding protein_coding MGP_NODShiLtJ_T0031709.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106496754 106501201 - MGP_NODShiLtJ_P0031709 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031710.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106496987 106501138 - MGP_NODShiLtJ_P0031710 Cdk5rap3 protein_coding protein_coding MGP_NODShiLtJ_T0031711.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106497008 106501186 - MGP_NODShiLtJ_P0031711 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031712.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106497118 106501186 - MGP_NODShiLtJ_P0031712 Cdk5rap3 protein_coding protein_coding MGP_NODShiLtJ_T0031713.1 MGP_NODShiLtJ_G0018865.1 mouse_genomes_project 11 106497455 106501139 - Cdk5rap3 protein_coding retained_intron MGP_NODShiLtJ_T0030242.1 MGP_NODShiLtJ_G0018486.1 mouse_genomes_project 11 79111940 79135069 - MGP_NODShiLtJ_P0030242 Smtnl2 protein_coding protein_coding MGP_NODShiLtJ_T0030243.1 MGP_NODShiLtJ_G0018486.1 mouse_genomes_project 11 79122038 79125273 - Smtnl2 protein_coding processed_transcript MGP_NODShiLtJ_T0030244.1 MGP_NODShiLtJ_G0018486.1 mouse_genomes_project 11 79123650 79124906 - Smtnl2 protein_coding processed_transcript MGP_NODShiLtJ_T0030343.1 MGP_NODShiLtJ_G0018515.1 mouse_genomes_project 11 80308939 80315143 - MGP_NODShiLtJ_P0030343 Olfr381 protein_coding protein_coding MGP_NODShiLtJ_T0030344.1 MGP_NODShiLtJ_G0018515.1 mouse_genomes_project 11 80308939 80315896 - MGP_NODShiLtJ_P0030344 Olfr381 protein_coding protein_coding MGP_NODShiLtJ_T0031013.1 MGP_NODShiLtJ_G0018688.1 mouse_genomes_project 11 90875497 90882391 + MGP_NODShiLtJ_P0031013 Slfn2 protein_coding protein_coding MGP_NODShiLtJ_T0003294.1 MGP_NODShiLtJ_G0003035.1 mouse_genomes_project 11 128542506 128562973 + antisense antisense MGP_NODShiLtJ_T0003295.1 MGP_NODShiLtJ_G0003035.1 mouse_genomes_project 11 128542508 128559509 + antisense antisense MGP_NODShiLtJ_T0003296.1 MGP_NODShiLtJ_G0003035.1 mouse_genomes_project 11 128556014 128559509 + antisense antisense MGP_NODShiLtJ_T0003297.1 MGP_NODShiLtJ_G0003035.1 mouse_genomes_project 11 128556628 128559509 + antisense antisense MGP_NODShiLtJ_T0006170.1 MGP_NODShiLtJ_G0005151.1 mouse_genomes_project 11 50632290 50641659 - Gm4926 lincRNA lincRNA MGP_NODShiLtJ_T0009599.1 MGP_NODShiLtJ_G0007732.1 mouse_genomes_project 11 71084802 71084901 - Gm25991 miRNA miRNA MGP_NODShiLtJ_T0006194.1 MGP_NODShiLtJ_G0005173.1 mouse_genomes_project 11 71312297 71323528 - Gm12295 lincRNA lincRNA MGP_NODShiLtJ_T0006195.1 MGP_NODShiLtJ_G0005173.1 mouse_genomes_project 11 71321634 71411193 - Gm12295 lincRNA lincRNA MGP_NODShiLtJ_T0029465.1 MGP_NODShiLtJ_G0018316.1 mouse_genomes_project 11 68789983 68829894 + MGP_NODShiLtJ_P0029465 Cdrt4 protein_coding protein_coding MGP_NODShiLtJ_T0017066.1 MGP_NODShiLtJ_G0015042.1 mouse_genomes_project 11 63659884 63661336 + 1700047K16Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0009582.1 MGP_NODShiLtJ_G0007715.1 mouse_genomes_project 11 54385226 54385341 + Gm23492 miRNA miRNA MGP_NODShiLtJ_T0029505.1 MGP_NODShiLtJ_G0018329.1 mouse_genomes_project 11 71924250 72284571 - MGP_NODShiLtJ_P0029505 Dnah9 protein_coding protein_coding MGP_NODShiLtJ_T0029506.1 MGP_NODShiLtJ_G0018329.1 mouse_genomes_project 11 71924371 72112626 - MGP_NODShiLtJ_P0029506 Dnah9 protein_coding protein_coding MGP_NODShiLtJ_T0029507.1 MGP_NODShiLtJ_G0018329.1 mouse_genomes_project 11 71945634 71951271 - Dnah9 protein_coding retained_intron MGP_NODShiLtJ_T0029508.1 MGP_NODShiLtJ_G0018329.1 mouse_genomes_project 11 72007776 72033246 - MGP_NODShiLtJ_P0029508 Dnah9 protein_coding protein_coding MGP_NODShiLtJ_T0029509.1 MGP_NODShiLtJ_G0018329.1 mouse_genomes_project 11 72231941 72284482 - MGP_NODShiLtJ_P0029509 Dnah9 protein_coding protein_coding MGP_NODShiLtJ_T0029510.1 MGP_NODShiLtJ_G0018329.1 mouse_genomes_project 11 72274798 72284589 - Dnah9 protein_coding retained_intron MGP_NODShiLtJ_T0009567.1 MGP_NODShiLtJ_G0007700.1 mouse_genomes_project 11 24219646 24219757 + Gm44381 miRNA miRNA MGP_NODShiLtJ_T0029913.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76429621 76442304 - MGP_NODShiLtJ_P0029913 Elp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029914.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76429623 76444554 - MGP_NODShiLtJ_P0029914 Elp5 protein_coding protein_coding MGP_NODShiLtJ_T0029915.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76429627 76442295 - Elp5 protein_coding retained_intron MGP_NODShiLtJ_T0029916.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76429631 76430806 - Elp5 protein_coding retained_intron MGP_NODShiLtJ_T0029917.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76430640 76442093 - MGP_NODShiLtJ_P0029917 Elp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029918.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76430917 76442293 - Elp5 protein_coding retained_intron MGP_NODShiLtJ_T0029919.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76432114 76442243 - Elp5 protein_coding retained_intron MGP_NODShiLtJ_T0029920.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76432132 76444941 - MGP_NODShiLtJ_P0029920 Elp5 protein_coding protein_coding MGP_NODShiLtJ_T0029921.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76436381 76445819 - MGP_NODShiLtJ_P0029921 Elp5 protein_coding protein_coding MGP_NODShiLtJ_T0029922.1 MGP_NODShiLtJ_G0018421.1 mouse_genomes_project 11 76442066 76442728 - MGP_NODShiLtJ_P0029922 Elp5 protein_coding protein_coding MGP_NODShiLtJ_T0028022.1 MGP_NODShiLtJ_G0017942.1 mouse_genomes_project 11 23290149 23335482 + MGP_NODShiLtJ_P0028022 Xpo1 protein_coding protein_coding MGP_NODShiLtJ_T0028023.1 MGP_NODShiLtJ_G0017942.1 mouse_genomes_project 11 23290149 23335482 + MGP_NODShiLtJ_P0028023 Xpo1 protein_coding protein_coding MGP_NODShiLtJ_T0028024.1 MGP_NODShiLtJ_G0017942.1 mouse_genomes_project 11 23290163 23334118 + MGP_NODShiLtJ_P0028024 Xpo1 protein_coding protein_coding MGP_NODShiLtJ_T0028025.1 MGP_NODShiLtJ_G0017942.1 mouse_genomes_project 11 23290166 23320336 + Xpo1 protein_coding processed_transcript MGP_NODShiLtJ_T0028026.1 MGP_NODShiLtJ_G0017942.1 mouse_genomes_project 11 23290186 23336135 + MGP_NODShiLtJ_P0028026 Xpo1 protein_coding protein_coding MGP_NODShiLtJ_T0028027.1 MGP_NODShiLtJ_G0017942.1 mouse_genomes_project 11 23290697 23301825 + MGP_NODShiLtJ_P0028027 Xpo1 protein_coding protein_coding MGP_NODShiLtJ_T0028028.1 MGP_NODShiLtJ_G0017942.1 mouse_genomes_project 11 23322528 23325336 + MGP_NODShiLtJ_P0028028 Xpo1 protein_coding protein_coding MGP_NODShiLtJ_T0032334.1 MGP_NODShiLtJ_G0019055.1 mouse_genomes_project 11 111567195 111570951 + MGP_NODShiLtJ_P0032334 protein_coding protein_coding MGP_NODShiLtJ_T0032335.1 MGP_NODShiLtJ_G0019055.1 mouse_genomes_project 11 111567335 111568832 + protein_coding processed_transcript MGP_NODShiLtJ_T0032336.1 MGP_NODShiLtJ_G0019055.1 mouse_genomes_project 11 111567343 111570951 + MGP_NODShiLtJ_P0032336 protein_coding protein_coding MGP_NODShiLtJ_T0032337.1 MGP_NODShiLtJ_G0019055.1 mouse_genomes_project 11 111567622 111570909 + MGP_NODShiLtJ_P0032337 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0032338.1 MGP_NODShiLtJ_G0019055.1 mouse_genomes_project 11 111568509 111570951 + MGP_NODShiLtJ_P0032338 protein_coding protein_coding MGP_NODShiLtJ_T0032339.1 MGP_NODShiLtJ_G0019055.1 mouse_genomes_project 11 111569771 111570951 + protein_coding processed_transcript MGP_NODShiLtJ_T0003082.1 MGP_NODShiLtJ_G0002858.1 mouse_genomes_project 11 24082670 24083599 + Gm12061 antisense antisense MGP_NODShiLtJ_T0029441.1 MGP_NODShiLtJ_G0018311.1 mouse_genomes_project 11 68566124 68566523 + MGP_NODShiLtJ_P0029441 Gm10428 protein_coding protein_coding MGP_NODShiLtJ_T0031535.1 MGP_NODShiLtJ_G0018817.1 mouse_genomes_project 11 103972991 103985652 - MGP_NODShiLtJ_P0031535 Gm11541 protein_coding protein_coding MGP_NODShiLtJ_T0032053.1 MGP_NODShiLtJ_G0018973.1 mouse_genomes_project 11 109733581 109734283 - MGP_NODShiLtJ_P0032053 protein_coding protein_coding MGP_NODShiLtJ_T0033136.1 MGP_NODShiLtJ_G0019222.1 mouse_genomes_project 11 126575759 126641097 - MGP_NODShiLtJ_P0033136 protein_coding protein_coding MGP_NODShiLtJ_T0006216.1 MGP_NODShiLtJ_G0005189.1 mouse_genomes_project 11 83847969 83856233 + Gm26780 lincRNA lincRNA MGP_NODShiLtJ_T0012499.1 MGP_NODShiLtJ_G0010607.1 mouse_genomes_project 11 63412557 63413225 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006320.1 MGP_NODShiLtJ_G0005265.1 mouse_genomes_project 11 134046338 134046540 + Gm29513 lincRNA lincRNA MGP_NODShiLtJ_T0032805.1 MGP_NODShiLtJ_G0019148.1 mouse_genomes_project 11 116777740 116778049 + MGP_NODShiLtJ_P0032805 Gm10840 protein_coding protein_coding MGP_NODShiLtJ_T0032261.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111267713 111304265 - MGP_NODShiLtJ_P0032261 Ezh1 protein_coding protein_coding MGP_NODShiLtJ_T0032262.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111267714 111304252 - MGP_NODShiLtJ_P0032262 Ezh1 protein_coding protein_coding MGP_NODShiLtJ_T0032263.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111269873 111271021 - Ezh1 protein_coding processed_transcript MGP_NODShiLtJ_T0032264.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111270328 111279806 - Ezh1 protein_coding processed_transcript MGP_NODShiLtJ_T0032265.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111275230 111277536 - Ezh1 protein_coding processed_transcript MGP_NODShiLtJ_T0032266.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111275770 111304235 - MGP_NODShiLtJ_P0032266 Ezh1 protein_coding protein_coding MGP_NODShiLtJ_T0032267.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111275895 111287730 - Ezh1 protein_coding processed_transcript MGP_NODShiLtJ_T0032268.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111284152 111286557 - Ezh1 protein_coding processed_transcript MGP_NODShiLtJ_T0032269.1 MGP_NODShiLtJ_G0019040.1 mouse_genomes_project 11 111295589 111304244 - Ezh1 protein_coding processed_transcript MGP_NODShiLtJ_T0032145.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110596523 110598492 - Dnajc7 protein_coding processed_transcript MGP_NODShiLtJ_T0032146.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110596523 110639228 - MGP_NODShiLtJ_P0032146 Dnajc7 protein_coding protein_coding MGP_NODShiLtJ_T0032147.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110596969 110599198 - Dnajc7 protein_coding processed_transcript MGP_NODShiLtJ_T0032148.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110598045 110604686 - Dnajc7 protein_coding processed_transcript MGP_NODShiLtJ_T0032149.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110604544 110638636 - MGP_NODShiLtJ_P0032149 Dnajc7 protein_coding protein_coding MGP_NODShiLtJ_T0032150.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110604551 110638657 - Dnajc7 protein_coding processed_transcript MGP_NODShiLtJ_T0032151.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110604676 110610366 - Dnajc7 protein_coding processed_transcript MGP_NODShiLtJ_T0032152.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110606621 110627350 - MGP_NODShiLtJ_P0032152 Dnajc7 protein_coding protein_coding MGP_NODShiLtJ_T0032153.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110611084 110638639 - Dnajc7 protein_coding processed_transcript MGP_NODShiLtJ_T0032154.1 MGP_NODShiLtJ_G0019014.1 mouse_genomes_project 11 110611993 110638719 - Dnajc7 protein_coding processed_transcript MGP_NODShiLtJ_T0097744.1 MGP_NODShiLtJ_G0036156.1 mouse_genomes_project 11 48475656 48476112 + pseudogene pseudogene MGP_NODShiLtJ_T0009615.1 MGP_NODShiLtJ_G0007748.1 mouse_genomes_project 11 77332339 77332432 - Gm22760 miRNA miRNA MGP_NODShiLtJ_T0029427.1 MGP_NODShiLtJ_G0018308.1 mouse_genomes_project 11 68408955 68455096 - MGP_NODShiLtJ_P0029427 Lrrc75a protein_coding protein_coding MGP_NODShiLtJ_T0029428.1 MGP_NODShiLtJ_G0018308.1 mouse_genomes_project 11 68409893 68454613 - Lrrc75a protein_coding processed_transcript MGP_NODShiLtJ_T0029429.1 MGP_NODShiLtJ_G0018308.1 mouse_genomes_project 11 68410097 68454622 - Lrrc75a protein_coding processed_transcript MGP_NODShiLtJ_T0017094.1 MGP_NODShiLtJ_G0015058.1 mouse_genomes_project 11 85740998 85742107 - Gm11193 processed_transcript processed_transcript MGP_NODShiLtJ_T0033027.1 MGP_NODShiLtJ_G0019196.1 mouse_genomes_project 11 121099275 121169445 - MGP_NODShiLtJ_P0033027 Abca9 protein_coding protein_coding MGP_NODShiLtJ_T0033028.1 MGP_NODShiLtJ_G0019196.1 mouse_genomes_project 11 121155151 121169304 - Abca9 protein_coding processed_transcript MGP_NODShiLtJ_T0030387.1 MGP_NODShiLtJ_G0018542.1 mouse_genomes_project 11 81442349 81678225 - MGP_NODShiLtJ_P0030387 Rap1gap2 protein_coding protein_coding MGP_NODShiLtJ_T0030388.1 MGP_NODShiLtJ_G0018542.1 mouse_genomes_project 11 81442476 81678197 - MGP_NODShiLtJ_P0030388 Rap1gap2 protein_coding protein_coding MGP_NODShiLtJ_T0030389.1 MGP_NODShiLtJ_G0018542.1 mouse_genomes_project 11 81442477 81479607 - Rap1gap2 protein_coding processed_transcript MGP_NODShiLtJ_T0030390.1 MGP_NODShiLtJ_G0018542.1 mouse_genomes_project 11 81444927 81609729 - MGP_NODShiLtJ_P0030390 Rap1gap2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030391.1 MGP_NODShiLtJ_G0018542.1 mouse_genomes_project 11 81510732 81678163 - MGP_NODShiLtJ_P0030391 Rap1gap2 protein_coding protein_coding MGP_NODShiLtJ_T0030449.1 MGP_NODShiLtJ_G0018556.1 mouse_genomes_project 11 82436882 82492638 - MGP_NODShiLtJ_P0030449 Rpa1 protein_coding protein_coding MGP_NODShiLtJ_T0030450.1 MGP_NODShiLtJ_G0018556.1 mouse_genomes_project 11 82439066 82492624 - MGP_NODShiLtJ_P0030450 Rpa1 protein_coding protein_coding MGP_NODShiLtJ_T0030451.1 MGP_NODShiLtJ_G0018556.1 mouse_genomes_project 11 82440023 82484848 - Rpa1 protein_coding processed_transcript MGP_NODShiLtJ_T0030452.1 MGP_NODShiLtJ_G0018556.1 mouse_genomes_project 11 82455607 82492609 - Rpa1 protein_coding retained_intron MGP_NODShiLtJ_T0030453.1 MGP_NODShiLtJ_G0018556.1 mouse_genomes_project 11 82484637 82492607 - Rpa1 protein_coding processed_transcript MGP_NODShiLtJ_T0029992.1 MGP_NODShiLtJ_G0018434.1 mouse_genomes_project 11 76721286 76726717 - MGP_NODShiLtJ_P0029992 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029993.1 MGP_NODShiLtJ_G0018434.1 mouse_genomes_project 11 76725702 76726840 - MGP_NODShiLtJ_P0029993 protein_coding protein_coding MGP_NODShiLtJ_T0029994.1 MGP_NODShiLtJ_G0018434.1 mouse_genomes_project 11 76725771 76726961 - protein_coding retained_intron MGP_NODShiLtJ_T0009657.1 MGP_NODShiLtJ_G0007790.1 mouse_genomes_project 11 111088681 111088751 + Mir6928 miRNA miRNA MGP_NODShiLtJ_T0012423.1 MGP_NODShiLtJ_G0010531.1 mouse_genomes_project 11 31119191 31120786 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012638.1 MGP_NODShiLtJ_G0010746.1 mouse_genomes_project 11 115652190 115654035 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003308.1 MGP_NODShiLtJ_G0003045.1 mouse_genomes_project 11 132307902 132309814 - Gm11770 antisense antisense MGP_NODShiLtJ_T0029133.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65189126 65255452 + protein_coding processed_transcript MGP_NODShiLtJ_T0029134.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65190352 65310430 + MGP_NODShiLtJ_P0029134 protein_coding protein_coding MGP_NODShiLtJ_T0029135.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65190364 65305731 + MGP_NODShiLtJ_P0029135 protein_coding protein_coding MGP_NODShiLtJ_T0029136.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65190364 65310424 + MGP_NODShiLtJ_P0029136 protein_coding protein_coding MGP_NODShiLtJ_T0029137.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65190364 65305731 + MGP_NODShiLtJ_P0029137 protein_coding protein_coding MGP_NODShiLtJ_T0029138.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65255447 65306110 + MGP_NODShiLtJ_P0029138 protein_coding protein_coding MGP_NODShiLtJ_T0029139.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65259312 65305731 + MGP_NODShiLtJ_P0029139 protein_coding protein_coding MGP_NODShiLtJ_T0029140.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65268610 65277291 + protein_coding processed_transcript MGP_NODShiLtJ_T0029141.1 MGP_NODShiLtJ_G0018255.1 mouse_genomes_project 11 65289336 65305731 + MGP_NODShiLtJ_P0029141 protein_coding protein_coding MGP_NODShiLtJ_T0031186.1 MGP_NODShiLtJ_G0018735.1 mouse_genomes_project 11 94170307 94320380 - MGP_NODShiLtJ_P0031186 Brip1 protein_coding protein_coding MGP_NODShiLtJ_T0031187.1 MGP_NODShiLtJ_G0018735.1 mouse_genomes_project 11 94313419 94320351 - Brip1 protein_coding processed_transcript MGP_NODShiLtJ_T0031188.1 MGP_NODShiLtJ_G0018735.1 mouse_genomes_project 11 94314085 94320353 - Brip1 protein_coding processed_transcript MGP_NODShiLtJ_T0029759.1 MGP_NODShiLtJ_G0018388.1 mouse_genomes_project 11 76017034 76020136 - MGP_NODShiLtJ_P0029759 Shbg protein_coding protein_coding MGP_NODShiLtJ_T0029760.1 MGP_NODShiLtJ_G0018388.1 mouse_genomes_project 11 76017878 76019171 - Shbg protein_coding processed_transcript MGP_NODShiLtJ_T0029027.1 MGP_NODShiLtJ_G0018204.1 mouse_genomes_project 11 63732161 63743959 + MGP_NODShiLtJ_P0029027 Lypd8 protein_coding protein_coding MGP_NODShiLtJ_T0029028.1 MGP_NODShiLtJ_G0018204.1 mouse_genomes_project 11 63732161 63744150 + MGP_NODShiLtJ_P0029028 Lypd8 protein_coding protein_coding MGP_NODShiLtJ_T0033567.1 MGP_NODShiLtJ_G0019304.1 mouse_genomes_project 11 129386275 129390921 + MGP_NODShiLtJ_P0033567 Gm11733 protein_coding protein_coding MGP_NODShiLtJ_T0027809.1 MGP_NODShiLtJ_G0017891.1 mouse_genomes_project 11 4520588 4528390 - MGP_NODShiLtJ_P0027809 Igfbp3 protein_coding protein_coding MGP_NODShiLtJ_T0027810.1 MGP_NODShiLtJ_G0017891.1 mouse_genomes_project 11 4522192 4528416 - MGP_NODShiLtJ_P0027810 Igfbp3 protein_coding protein_coding MGP_NODShiLtJ_T0032510.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112637051 112645403 + MGP_NODShiLtJ_P0032510 Rundc3a protein_coding protein_coding MGP_NODShiLtJ_T0032511.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112637051 112645403 + MGP_NODShiLtJ_P0032511 Rundc3a protein_coding protein_coding MGP_NODShiLtJ_T0032512.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112637051 112645403 + MGP_NODShiLtJ_P0032512 Rundc3a protein_coding protein_coding MGP_NODShiLtJ_T0032513.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112637051 112646204 + MGP_NODShiLtJ_P0032513 Rundc3a protein_coding protein_coding MGP_NODShiLtJ_T0032514.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112641512 112646204 + Rundc3a protein_coding retained_intron MGP_NODShiLtJ_T0032515.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112641767 112643428 + Rundc3a protein_coding processed_transcript MGP_NODShiLtJ_T0032516.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112642815 112645878 + Rundc3a protein_coding processed_transcript MGP_NODShiLtJ_T0032517.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112643212 112645875 + Rundc3a protein_coding processed_transcript MGP_NODShiLtJ_T0032518.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112643404 112645801 + Rundc3a protein_coding processed_transcript MGP_NODShiLtJ_T0032519.1 MGP_NODShiLtJ_G0019086.1 mouse_genomes_project 11 112643506 112644434 + Rundc3a protein_coding processed_transcript MGP_NODShiLtJ_T0101546.1 MGP_NODShiLtJ_G0039716.1 mouse_genomes_project 11 63835861 63836801 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003083.1 MGP_NODShiLtJ_G0002859.1 mouse_genomes_project 11 24309451 24325827 - Gm12064 antisense antisense MGP_NODShiLtJ_T0009656.1 MGP_NODShiLtJ_G0007789.1 mouse_genomes_project 11 110484313 110484383 - Mir7116 miRNA miRNA MGP_NODShiLtJ_T0031690.1 MGP_NODShiLtJ_G0018863.1 mouse_genomes_project 11 106393157 106399757 - MGP_NODShiLtJ_P0031690 Nfe2l1 protein_coding protein_coding MGP_NODShiLtJ_T0031691.1 MGP_NODShiLtJ_G0018863.1 mouse_genomes_project 11 106393157 106405689 - MGP_NODShiLtJ_P0031691 Nfe2l1 protein_coding protein_coding MGP_NODShiLtJ_T0031692.1 MGP_NODShiLtJ_G0018863.1 mouse_genomes_project 11 106393342 106403465 - MGP_NODShiLtJ_P0031692 Nfe2l1 protein_coding protein_coding MGP_NODShiLtJ_T0031693.1 MGP_NODShiLtJ_G0018863.1 mouse_genomes_project 11 106395836 106399871 - MGP_NODShiLtJ_P0031693 Nfe2l1 protein_coding protein_coding MGP_NODShiLtJ_T0031694.1 MGP_NODShiLtJ_G0018863.1 mouse_genomes_project 11 106396213 106399752 - MGP_NODShiLtJ_P0031694 Nfe2l1 protein_coding protein_coding MGP_NODShiLtJ_T0031695.1 MGP_NODShiLtJ_G0018863.1 mouse_genomes_project 11 106397089 106398469 - Nfe2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0031696.1 MGP_NODShiLtJ_G0018863.1 mouse_genomes_project 11 106397966 106400296 - Nfe2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0031697.1 MGP_NODShiLtJ_G0018863.1 mouse_genomes_project 11 106403478 106405241 - Nfe2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0032505.1 MGP_NODShiLtJ_G0019085.1 mouse_genomes_project 11 112584755 112601178 - MGP_NODShiLtJ_P0032505 Slc4a1 protein_coding protein_coding MGP_NODShiLtJ_T0032506.1 MGP_NODShiLtJ_G0019085.1 mouse_genomes_project 11 112594982 112596469 - Slc4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0032507.1 MGP_NODShiLtJ_G0019085.1 mouse_genomes_project 11 112596062 112599602 - Slc4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0032508.1 MGP_NODShiLtJ_G0019085.1 mouse_genomes_project 11 112596095 112601145 - Slc4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0032509.1 MGP_NODShiLtJ_G0019085.1 mouse_genomes_project 11 112597284 112602101 - Slc4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0003102.1 MGP_NODShiLtJ_G0002877.1 mouse_genomes_project 11 54643076 54643999 - Gm12195 antisense antisense MGP_NODShiLtJ_T0032678.1 MGP_NODShiLtJ_G0019116.1 mouse_genomes_project 11 113675955 113724271 - MGP_NODShiLtJ_P0032678 Plekhm1 protein_coding protein_coding MGP_NODShiLtJ_T0032679.1 MGP_NODShiLtJ_G0019116.1 mouse_genomes_project 11 113678338 113706435 - MGP_NODShiLtJ_P0032679 Plekhm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033823.1 MGP_NODShiLtJ_G0019357.1 mouse_genomes_project 11 132572790 132578445 - Pde6g protein_coding processed_transcript MGP_NODShiLtJ_T0033824.1 MGP_NODShiLtJ_G0019357.1 mouse_genomes_project 11 132572809 132578463 - Pde6g protein_coding processed_transcript MGP_NODShiLtJ_T0033825.1 MGP_NODShiLtJ_G0019357.1 mouse_genomes_project 11 132572811 132578511 - MGP_NODShiLtJ_P0033825 Pde6g protein_coding protein_coding MGP_NODShiLtJ_T0030879.1 MGP_NODShiLtJ_G0018652.1 mouse_genomes_project 11 87543560 87591644 + MGP_NODShiLtJ_P0030879 Suz12 protein_coding protein_coding MGP_NODShiLtJ_T0030880.1 MGP_NODShiLtJ_G0018652.1 mouse_genomes_project 11 87543560 87591645 + MGP_NODShiLtJ_P0030880 Suz12 protein_coding protein_coding MGP_NODShiLtJ_T0030881.1 MGP_NODShiLtJ_G0018652.1 mouse_genomes_project 11 87546040 87553608 + Suz12 protein_coding retained_intron MGP_NODShiLtJ_T0030882.1 MGP_NODShiLtJ_G0018652.1 mouse_genomes_project 11 87546071 87569265 + Suz12 protein_coding retained_intron MGP_NODShiLtJ_T0030883.1 MGP_NODShiLtJ_G0018652.1 mouse_genomes_project 11 87546245 87569195 + MGP_NODShiLtJ_P0030883 Suz12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030884.1 MGP_NODShiLtJ_G0018652.1 mouse_genomes_project 11 87582394 87589523 + MGP_NODShiLtJ_P0030884 Suz12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003166.1 MGP_NODShiLtJ_G0002932.1 mouse_genomes_project 11 75698349 75700643 - Kcnab3os antisense antisense MGP_NODShiLtJ_T0027910.1 MGP_NODShiLtJ_G0017914.1 mouse_genomes_project 11 16453476 16510633 + Wdr92 protein_coding processed_transcript MGP_NODShiLtJ_T0027914.1 MGP_NODShiLtJ_G0017914.1 mouse_genomes_project 11 16485757 16511515 + MGP_NODShiLtJ_P0027914 Wdr92 protein_coding protein_coding MGP_NODShiLtJ_T0032181.1 MGP_NODShiLtJ_G0019021.1 mouse_genomes_project 11 110760981 110780392 - MGP_NODShiLtJ_P0032181 Kcnh4 protein_coding protein_coding MGP_NODShiLtJ_T0032182.1 MGP_NODShiLtJ_G0019021.1 mouse_genomes_project 11 110760987 110780594 - MGP_NODShiLtJ_P0032182 Kcnh4 protein_coding protein_coding MGP_NODShiLtJ_T0011203.1 MGP_NODShiLtJ_G0009336.1 mouse_genomes_project 11 110796204 110796492 - Gm24358 misc_RNA misc_RNA MGP_NODShiLtJ_T0031204.1 MGP_NODShiLtJ_G0018738.1 mouse_genomes_project 11 94632227 94647733 + MGP_NODShiLtJ_P0031204 Rnft1 protein_coding protein_coding MGP_NODShiLtJ_T0031205.1 MGP_NODShiLtJ_G0018738.1 mouse_genomes_project 11 94632255 94637960 + Rnft1 protein_coding processed_transcript MGP_NODShiLtJ_T0031206.1 MGP_NODShiLtJ_G0018738.1 mouse_genomes_project 11 94632300 94633676 + Rnft1 protein_coding processed_transcript MGP_NODShiLtJ_T0032049.1 MGP_NODShiLtJ_G0018969.1 mouse_genomes_project 11 109689450 109690590 + MGP_NODShiLtJ_P0032049 Krtap4-9 protein_coding protein_coding MGP_NODShiLtJ_T0029104.1 MGP_NODShiLtJ_G0018243.1 mouse_genomes_project 11 64700240 64702659 + MGP_NODShiLtJ_P0029104 2310033P09Rik protein_coding protein_coding MGP_NODShiLtJ_T0098258.1 MGP_NODShiLtJ_G0036669.1 mouse_genomes_project 11 95954038 95959216 + 1110028F11Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0098259.1 MGP_NODShiLtJ_G0036669.1 mouse_genomes_project 11 95954765 95958874 + 1110028F11Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0030717.1 MGP_NODShiLtJ_G0018610.1 mouse_genomes_project 11 85503901 85512516 - Eral1 protein_coding retained_intron MGP_NODShiLtJ_T0030718.1 MGP_NODShiLtJ_G0018610.1 mouse_genomes_project 11 85503901 85512516 - MGP_NODShiLtJ_P0030718 Eral1 protein_coding protein_coding MGP_NODShiLtJ_T0030719.1 MGP_NODShiLtJ_G0018610.1 mouse_genomes_project 11 85505056 85506497 - Eral1 protein_coding retained_intron MGP_NODShiLtJ_T0027550.1 MGP_NODShiLtJ_G0017832.1 mouse_genomes_project 11 1059812 1065772 + MGP_NODShiLtJ_P0027550 Rnf215 protein_coding protein_coding MGP_NODShiLtJ_T0027551.1 MGP_NODShiLtJ_G0017832.1 mouse_genomes_project 11 1059824 1061979 + MGP_NODShiLtJ_P0027551 Rnf215 protein_coding protein_coding MGP_NODShiLtJ_T0027552.1 MGP_NODShiLtJ_G0017832.1 mouse_genomes_project 11 1059892 1061828 + MGP_NODShiLtJ_P0027552 Rnf215 protein_coding protein_coding MGP_NODShiLtJ_T0027553.1 MGP_NODShiLtJ_G0017832.1 mouse_genomes_project 11 1060112 1061766 + Rnf215 protein_coding processed_transcript MGP_NODShiLtJ_T0098703.1 MGP_NODShiLtJ_G0037097.1 mouse_genomes_project 11 87147565 87147673 - Gm24887 snRNA snRNA MGP_NODShiLtJ_T0032880.1 MGP_NODShiLtJ_G0019166.1 mouse_genomes_project 11 117459403 117469523 - MGP_NODShiLtJ_P0032880 Ddx5 protein_coding protein_coding MGP_NODShiLtJ_T0032881.1 MGP_NODShiLtJ_G0019166.1 mouse_genomes_project 11 117460596 117469485 - MGP_NODShiLtJ_P0032881 Ddx5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032882.1 MGP_NODShiLtJ_G0019166.1 mouse_genomes_project 11 117460881 117462372 - Ddx5 protein_coding processed_transcript MGP_NODShiLtJ_T0032883.1 MGP_NODShiLtJ_G0019166.1 mouse_genomes_project 11 117462024 117469458 - Ddx5 protein_coding processed_transcript MGP_NODShiLtJ_T0032884.1 MGP_NODShiLtJ_G0019166.1 mouse_genomes_project 11 117462453 117463767 - Ddx5 protein_coding retained_intron MGP_NODShiLtJ_T0032885.1 MGP_NODShiLtJ_G0019166.1 mouse_genomes_project 11 117463863 117464771 - Ddx5 protein_coding processed_transcript MGP_NODShiLtJ_T0032886.1 MGP_NODShiLtJ_G0019166.1 mouse_genomes_project 11 117464216 117470176 - MGP_NODShiLtJ_P0032886 Ddx5 protein_coding protein_coding MGP_NODShiLtJ_T0032887.1 MGP_NODShiLtJ_G0019166.1 mouse_genomes_project 11 117464791 117469874 - MGP_NODShiLtJ_P0032887 Ddx5 protein_coding protein_coding MGP_NODShiLtJ_T0098680.1 MGP_NODShiLtJ_G0037074.1 mouse_genomes_project 11 52058483 52058644 - Gm23039 snRNA snRNA MGP_NODShiLtJ_T0033019.1 MGP_NODShiLtJ_G0019195.1 mouse_genomes_project 11 121007696 121093836 - MGP_NODShiLtJ_P0033019 Abca8a protein_coding protein_coding MGP_NODShiLtJ_T0033020.1 MGP_NODShiLtJ_G0019195.1 mouse_genomes_project 11 121007698 121093795 - MGP_NODShiLtJ_P0033020 Abca8a protein_coding protein_coding MGP_NODShiLtJ_T0033021.1 MGP_NODShiLtJ_G0019195.1 mouse_genomes_project 11 121007698 121093795 - MGP_NODShiLtJ_P0033021 Abca8a protein_coding protein_coding MGP_NODShiLtJ_T0033022.1 MGP_NODShiLtJ_G0019195.1 mouse_genomes_project 11 121008910 121012144 - Abca8a protein_coding processed_transcript MGP_NODShiLtJ_T0033023.1 MGP_NODShiLtJ_G0019195.1 mouse_genomes_project 11 121058024 121060543 - Abca8a protein_coding processed_transcript MGP_NODShiLtJ_T0033024.1 MGP_NODShiLtJ_G0019195.1 mouse_genomes_project 11 121066672 121068257 - Abca8a protein_coding processed_transcript MGP_NODShiLtJ_T0033025.1 MGP_NODShiLtJ_G0019195.1 mouse_genomes_project 11 121068190 121073518 - MGP_NODShiLtJ_P0033025 Abca8a protein_coding protein_coding MGP_NODShiLtJ_T0033026.1 MGP_NODShiLtJ_G0019195.1 mouse_genomes_project 11 121082024 121093795 - MGP_NODShiLtJ_P0033026 Abca8a protein_coding protein_coding MGP_NODShiLtJ_T0017084.1 MGP_NODShiLtJ_G0015052.1 mouse_genomes_project 11 78931671 78934984 + 4930563E22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017085.1 MGP_NODShiLtJ_G0015052.1 mouse_genomes_project 11 78931705 78934978 + 4930563E22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0009661.1 MGP_NODShiLtJ_G0007794.1 mouse_genomes_project 11 112648568 112648636 - Mir6930 miRNA miRNA MGP_NODShiLtJ_T0031006.1 MGP_NODShiLtJ_G0018685.1 mouse_genomes_project 11 90711631 90712453 + Slfn5 protein_coding processed_transcript MGP_NODShiLtJ_T0031007.1 MGP_NODShiLtJ_G0018685.1 mouse_genomes_project 11 90712377 90721485 + MGP_NODShiLtJ_P0031007 Slfn5 protein_coding protein_coding MGP_NODShiLtJ_T0031008.1 MGP_NODShiLtJ_G0018685.1 mouse_genomes_project 11 90712384 90724414 + MGP_NODShiLtJ_P0031008 Slfn5 protein_coding protein_coding MGP_NODShiLtJ_T0031009.1 MGP_NODShiLtJ_G0018685.1 mouse_genomes_project 11 90714915 90723379 + MGP_NODShiLtJ_P0031009 Slfn5 protein_coding protein_coding MGP_NODShiLtJ_T0009669.1 MGP_NODShiLtJ_G0007802.1 mouse_genomes_project 11 117609926 117610030 - Gm27322 miRNA miRNA MGP_NODShiLtJ_T0099954.1 MGP_NODShiLtJ_G0038348.1 mouse_genomes_project 11 102001266 102001409 + Gm25113 snoRNA snoRNA MGP_NODShiLtJ_T0003104.1 MGP_NODShiLtJ_G0002879.1 mouse_genomes_project 11 55263919 55269372 - Gm12200 antisense antisense MGP_NODShiLtJ_T0030824.1 MGP_NODShiLtJ_G0018635.1 mouse_genomes_project 11 85997525 86002896 + MGP_NODShiLtJ_P0030824 Ift20 protein_coding protein_coding MGP_NODShiLtJ_T0030825.1 MGP_NODShiLtJ_G0018635.1 mouse_genomes_project 11 85997592 86002541 + MGP_NODShiLtJ_P0030825 Ift20 protein_coding protein_coding MGP_NODShiLtJ_T0030826.1 MGP_NODShiLtJ_G0018635.1 mouse_genomes_project 11 85997607 86002648 + MGP_NODShiLtJ_P0030826 Ift20 protein_coding protein_coding MGP_NODShiLtJ_T0030827.1 MGP_NODShiLtJ_G0018635.1 mouse_genomes_project 11 85997609 86002648 + Ift20 protein_coding retained_intron MGP_NODShiLtJ_T0030828.1 MGP_NODShiLtJ_G0018635.1 mouse_genomes_project 11 85997637 86002648 + Ift20 protein_coding retained_intron MGP_NODShiLtJ_T0031200.1 MGP_NODShiLtJ_G0018737.1 mouse_genomes_project 11 94396400 94498483 - MGP_NODShiLtJ_P0031200 Med13 protein_coding protein_coding MGP_NODShiLtJ_T0031201.1 MGP_NODShiLtJ_G0018737.1 mouse_genomes_project 11 94402398 94408527 - Med13 protein_coding processed_transcript MGP_NODShiLtJ_T0031202.1 MGP_NODShiLtJ_G0018737.1 mouse_genomes_project 11 94405225 94408919 - Med13 protein_coding retained_intron MGP_NODShiLtJ_T0031203.1 MGP_NODShiLtJ_G0018737.1 mouse_genomes_project 11 94468327 94469330 - Med13 protein_coding retained_intron MGP_NODShiLtJ_T0098685.1 MGP_NODShiLtJ_G0037079.1 mouse_genomes_project 11 62993635 62993738 + Gm24582 snRNA snRNA MGP_NODShiLtJ_T0029039.1 MGP_NODShiLtJ_G0018214.1 mouse_genomes_project 11 63915833 63921217 - MGP_NODShiLtJ_P0029039 Olfr328 protein_coding protein_coding MGP_NODShiLtJ_T0029040.1 MGP_NODShiLtJ_G0018214.1 mouse_genomes_project 11 63915833 63918176 - MGP_NODShiLtJ_P0029040 Olfr328 protein_coding protein_coding MGP_NODShiLtJ_T0028828.1 MGP_NODShiLtJ_G0018152.1 mouse_genomes_project 11 58490924 58507763 - Il4 protein_coding processed_transcript MGP_NODShiLtJ_T0028829.1 MGP_NODShiLtJ_G0018152.1 mouse_genomes_project 11 58503007 58509216 - MGP_NODShiLtJ_P0028829 Il4 protein_coding protein_coding MGP_NODShiLtJ_T0028830.1 MGP_NODShiLtJ_G0018152.1 mouse_genomes_project 11 58503007 58507877 - MGP_NODShiLtJ_P0028830 Il4 protein_coding protein_coding MGP_NODShiLtJ_T0028831.1 MGP_NODShiLtJ_G0018152.1 mouse_genomes_project 11 58503007 58508899 - MGP_NODShiLtJ_P0028831 Il4 protein_coding protein_coding MGP_NODShiLtJ_T0012575.1 MGP_NODShiLtJ_G0010683.1 mouse_genomes_project 11 91567279 91567468 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027622.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 1999128 2056907 + MGP_NODShiLtJ_P0027622 Ap1b1 protein_coding protein_coding MGP_NODShiLtJ_T0027623.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 1999128 2056845 + MGP_NODShiLtJ_P0027623 Ap1b1 protein_coding protein_coding MGP_NODShiLtJ_T0027624.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 1999216 2029646 + Ap1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0027625.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 1999238 2030756 + Ap1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0027626.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 2022828 2029646 + Ap1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0027627.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 2022884 2056845 + MGP_NODShiLtJ_P0027627 Ap1b1 protein_coding protein_coding MGP_NODShiLtJ_T0027628.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 2045091 2046906 + Ap1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0027629.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 2051484 2054518 + Ap1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0027630.1 MGP_NODShiLtJ_G0017850.1 mouse_genomes_project 11 2052879 2054537 + Ap1b1 protein_coding processed_transcript MGP_NODShiLtJ_T0034023.1 MGP_NODShiLtJ_G0019395.1 mouse_genomes_project 11 133342002 133344179 + MGP_NODShiLtJ_P0034023 Tex19.1 protein_coding protein_coding MGP_NODShiLtJ_T0034024.1 MGP_NODShiLtJ_G0019395.1 mouse_genomes_project 11 133342016 133342727 + MGP_NODShiLtJ_P0034024 Tex19.1 protein_coding protein_coding MGP_NODShiLtJ_T0027938.1 MGP_NODShiLtJ_G0017922.1 mouse_genomes_project 11 19791219 19813527 - MGP_NODShiLtJ_P0027938 Cep68 protein_coding protein_coding MGP_NODShiLtJ_T0027939.1 MGP_NODShiLtJ_G0017922.1 mouse_genomes_project 11 19802524 19813527 - MGP_NODShiLtJ_P0027939 Cep68 protein_coding protein_coding MGP_NODShiLtJ_T0027940.1 MGP_NODShiLtJ_G0017922.1 mouse_genomes_project 11 19802525 19813538 - MGP_NODShiLtJ_P0027940 Cep68 protein_coding protein_coding MGP_NODShiLtJ_T0027941.1 MGP_NODShiLtJ_G0017922.1 mouse_genomes_project 11 19805667 19813492 - Cep68 protein_coding retained_intron MGP_NODShiLtJ_T0033451.1 MGP_NODShiLtJ_G0019283.1 mouse_genomes_project 11 128201914 128207807 + Ubald2 protein_coding processed_transcript MGP_NODShiLtJ_T0033453.1 MGP_NODShiLtJ_G0019283.1 mouse_genomes_project 11 128201971 128210559 + MGP_NODShiLtJ_P0033453 Ubald2 protein_coding protein_coding MGP_NODShiLtJ_T0003091.1 MGP_NODShiLtJ_G0002866.1 mouse_genomes_project 11 36233259 36241665 + 4930403D09Rik antisense antisense MGP_NODShiLtJ_T0012589.1 MGP_NODShiLtJ_G0010697.1 mouse_genomes_project 11 96707131 96707456 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006177.1 MGP_NODShiLtJ_G0005157.1 mouse_genomes_project 11 59133250 59169877 - 4933405E24Rik lincRNA lincRNA MGP_NODShiLtJ_T0028567.1 MGP_NODShiLtJ_G0018087.1 mouse_genomes_project 11 54136701 54138210 + MGP_NODShiLtJ_P0028567 Scgb3a1 protein_coding protein_coding MGP_NODShiLtJ_T0028568.1 MGP_NODShiLtJ_G0018087.1 mouse_genomes_project 11 54136701 54138210 + MGP_NODShiLtJ_P0028568 Scgb3a1 protein_coding protein_coding MGP_NODShiLtJ_T0099952.1 MGP_NODShiLtJ_G0038346.1 mouse_genomes_project 11 91226866 91226998 - Gm23951 snoRNA snoRNA MGP_NODShiLtJ_T0028832.1 MGP_NODShiLtJ_G0018153.1 mouse_genomes_project 11 58521910 58526741 - MGP_NODShiLtJ_P0028832 Il13 protein_coding protein_coding MGP_NODShiLtJ_T0032681.1 MGP_NODShiLtJ_G0019118.1 mouse_genomes_project 11 113942633 113950449 - MGP_NODShiLtJ_P0032681 Lyzl6 protein_coding protein_coding MGP_NODShiLtJ_T0032682.1 MGP_NODShiLtJ_G0019118.1 mouse_genomes_project 11 113942636 113950460 - MGP_NODShiLtJ_P0032682 Lyzl6 protein_coding protein_coding MGP_NODShiLtJ_T0032683.1 MGP_NODShiLtJ_G0019118.1 mouse_genomes_project 11 113942639 113946585 - Lyzl6 protein_coding processed_transcript MGP_NODShiLtJ_T0032455.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112418316 112455067 - MGP_NODShiLtJ_P0032455 Hdac5 protein_coding protein_coding MGP_NODShiLtJ_T0032456.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419627 112455025 - MGP_NODShiLtJ_P0032456 Hdac5 protein_coding protein_coding MGP_NODShiLtJ_T0032457.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419630 112421069 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032458.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419632 112421752 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032459.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419632 112442770 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032460.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419632 112420442 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032461.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419632 112420452 - MGP_NODShiLtJ_P0032461 Hdac5 protein_coding protein_coding MGP_NODShiLtJ_T0032462.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419632 112455040 - MGP_NODShiLtJ_P0032462 Hdac5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032463.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419634 112455037 - MGP_NODShiLtJ_P0032463 Hdac5 protein_coding protein_coding MGP_NODShiLtJ_T0032464.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112419634 112455067 - MGP_NODShiLtJ_P0032464 Hdac5 protein_coding protein_coding MGP_NODShiLtJ_T0032465.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112420120 112421963 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032466.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112420564 112422779 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032467.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112422562 112423377 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032468.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112422847 112424241 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032469.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112423273 112424700 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032470.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112429770 112455043 - MGP_NODShiLtJ_P0032470 Hdac5 protein_coding protein_coding MGP_NODShiLtJ_T0032471.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112430511 112442769 - MGP_NODShiLtJ_P0032471 Hdac5 protein_coding protein_coding MGP_NODShiLtJ_T0032472.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112430887 112442770 - Hdac5 protein_coding retained_intron MGP_NODShiLtJ_T0032473.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112442551 112455034 - Hdac5 protein_coding processed_transcript MGP_NODShiLtJ_T0032474.1 MGP_NODShiLtJ_G0019079.1 mouse_genomes_project 11 112442993 112455047 - Hdac5 protein_coding processed_transcript MGP_NODShiLtJ_T0003261.1 MGP_NODShiLtJ_G0003008.1 mouse_genomes_project 11 116568613 116594518 - Gm11651 antisense antisense MGP_NODShiLtJ_T0003262.1 MGP_NODShiLtJ_G0003008.1 mouse_genomes_project 11 116574651 116594490 - Gm11651 antisense antisense MGP_NODShiLtJ_T0101542.1 MGP_NODShiLtJ_G0039712.1 mouse_genomes_project 11 53345277 53396224 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000821.1 MGP_NODShiLtJ_G0000751.1 mouse_genomes_project 11 18290578 18293746 - TEC TEC MGP_NODShiLtJ_T0006137.1 MGP_NODShiLtJ_G0005123.1 mouse_genomes_project 11 25644455 25666307 + Gm12069 lincRNA lincRNA MGP_NODShiLtJ_T0030037.1 MGP_NODShiLtJ_G0018445.1 mouse_genomes_project 11 76996950 76997873 + MGP_NODShiLtJ_P0030037 Zmynd15 protein_coding protein_coding MGP_NODShiLtJ_T0030038.1 MGP_NODShiLtJ_G0018445.1 mouse_genomes_project 11 76997147 76997907 + MGP_NODShiLtJ_P0030038 Zmynd15 protein_coding protein_coding MGP_NODShiLtJ_T0030039.1 MGP_NODShiLtJ_G0018445.1 mouse_genomes_project 11 76997206 77003210 + Zmynd15 protein_coding retained_intron MGP_NODShiLtJ_T0030040.1 MGP_NODShiLtJ_G0018445.1 mouse_genomes_project 11 76997575 77003101 + MGP_NODShiLtJ_P0030040 Zmynd15 protein_coding protein_coding MGP_NODShiLtJ_T0030041.1 MGP_NODShiLtJ_G0018445.1 mouse_genomes_project 11 76997580 77003220 + MGP_NODShiLtJ_P0030041 Zmynd15 protein_coding protein_coding MGP_NODShiLtJ_T0006248.1 MGP_NODShiLtJ_G0005209.1 mouse_genomes_project 11 97147502 97156991 - lincRNA lincRNA MGP_NODShiLtJ_T0009633.1 MGP_NODShiLtJ_G0007766.1 mouse_genomes_project 11 90817790 90817853 - Gm27598 miRNA miRNA MGP_NODShiLtJ_T0032032.1 MGP_NODShiLtJ_G0018952.1 mouse_genomes_project 11 109452254 109452847 - MGP_NODShiLtJ_P0032032 Krtap1-4 protein_coding protein_coding MGP_NODShiLtJ_T0028929.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59934275 59981128 - MGP_NODShiLtJ_P0028929 Tnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028930.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59934277 59981110 - Tnip1 protein_coding processed_transcript MGP_NODShiLtJ_T0028931.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59934277 59987912 - MGP_NODShiLtJ_P0028931 Tnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028932.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59934277 59987908 - MGP_NODShiLtJ_P0028932 Tnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028933.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59934277 59987913 - MGP_NODShiLtJ_P0028933 Tnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028934.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59934277 59987906 - MGP_NODShiLtJ_P0028934 Tnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028935.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59934279 59987905 - MGP_NODShiLtJ_P0028935 Tnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028936.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59942102 59944566 - Tnip1 protein_coding retained_intron MGP_NODShiLtJ_T0028937.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59950190 59981128 - MGP_NODShiLtJ_P0028937 Tnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028938.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59957515 59981053 - MGP_NODShiLtJ_P0028938 Tnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028939.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59965444 59981093 - Tnip1 protein_coding processed_transcript MGP_NODShiLtJ_T0028940.1 MGP_NODShiLtJ_G0018175.1 mouse_genomes_project 11 59965498 59987905 - Tnip1 protein_coding processed_transcript MGP_NODShiLtJ_T0029854.1 MGP_NODShiLtJ_G0018413.1 mouse_genomes_project 11 76338337 76346962 - MGP_NODShiLtJ_P0029854 Acap1 protein_coding protein_coding MGP_NODShiLtJ_T0029855.1 MGP_NODShiLtJ_G0018413.1 mouse_genomes_project 11 76338337 76352157 - MGP_NODShiLtJ_P0029855 Acap1 protein_coding protein_coding MGP_NODShiLtJ_T0029856.1 MGP_NODShiLtJ_G0018413.1 mouse_genomes_project 11 76338395 76357181 - MGP_NODShiLtJ_P0029856 Acap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029857.1 MGP_NODShiLtJ_G0018413.1 mouse_genomes_project 11 76340253 76345188 - Acap1 protein_coding processed_transcript MGP_NODShiLtJ_T0029858.1 MGP_NODShiLtJ_G0018413.1 mouse_genomes_project 11 76346004 76347122 - Acap1 protein_coding processed_transcript MGP_NODShiLtJ_T0033358.1 MGP_NODShiLtJ_G0019267.1 mouse_genomes_project 11 127768731 127775364 - MGP_NODShiLtJ_P0033358 H3f3b protein_coding protein_coding MGP_NODShiLtJ_T0033359.1 MGP_NODShiLtJ_G0019267.1 mouse_genomes_project 11 127768780 127771358 - MGP_NODShiLtJ_P0033359 H3f3b protein_coding protein_coding MGP_NODShiLtJ_T0033360.1 MGP_NODShiLtJ_G0019267.1 mouse_genomes_project 11 127770144 127771368 - H3f3b protein_coding processed_transcript MGP_NODShiLtJ_T0033361.1 MGP_NODShiLtJ_G0019267.1 mouse_genomes_project 11 127770351 127771327 - H3f3b protein_coding processed_transcript MGP_NODShiLtJ_T0027615.1 MGP_NODShiLtJ_G0017848.1 mouse_genomes_project 11 1901826 1936069 + MGP_NODShiLtJ_P0027615 Thoc5 protein_coding protein_coding MGP_NODShiLtJ_T0027616.1 MGP_NODShiLtJ_G0017848.1 mouse_genomes_project 11 1901849 1936067 + MGP_NODShiLtJ_P0027616 Thoc5 protein_coding protein_coding MGP_NODShiLtJ_T0027617.1 MGP_NODShiLtJ_G0017848.1 mouse_genomes_project 11 1909472 1911727 + Thoc5 protein_coding processed_transcript MGP_NODShiLtJ_T0027618.1 MGP_NODShiLtJ_G0017848.1 mouse_genomes_project 11 1909472 1921339 + Thoc5 protein_coding processed_transcript MGP_NODShiLtJ_T0027619.1 MGP_NODShiLtJ_G0017848.1 mouse_genomes_project 11 1909472 1925477 + MGP_NODShiLtJ_P0027619 Thoc5 protein_coding protein_coding MGP_NODShiLtJ_T0027620.1 MGP_NODShiLtJ_G0017848.1 mouse_genomes_project 11 1922547 1927687 + Thoc5 protein_coding processed_transcript MGP_NODShiLtJ_T0012500.1 MGP_NODShiLtJ_G0010608.1 mouse_genomes_project 11 63510544 63511818 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032448.1 MGP_NODShiLtJ_G0019078.1 mouse_genomes_project 11 112413465 112417966 + MGP_NODShiLtJ_P0032448 G6pc3 protein_coding protein_coding MGP_NODShiLtJ_T0032449.1 MGP_NODShiLtJ_G0019078.1 mouse_genomes_project 11 112413514 112417966 + MGP_NODShiLtJ_P0032449 G6pc3 protein_coding protein_coding MGP_NODShiLtJ_T0032450.1 MGP_NODShiLtJ_G0019078.1 mouse_genomes_project 11 112413600 112416026 + G6pc3 protein_coding processed_transcript MGP_NODShiLtJ_T0032451.1 MGP_NODShiLtJ_G0019078.1 mouse_genomes_project 11 112413671 112417085 + G6pc3 protein_coding processed_transcript MGP_NODShiLtJ_T0032452.1 MGP_NODShiLtJ_G0019078.1 mouse_genomes_project 11 112415693 112417537 + G6pc3 protein_coding processed_transcript MGP_NODShiLtJ_T0032453.1 MGP_NODShiLtJ_G0019078.1 mouse_genomes_project 11 112415903 112417483 + G6pc3 protein_coding processed_transcript MGP_NODShiLtJ_T0032454.1 MGP_NODShiLtJ_G0019078.1 mouse_genomes_project 11 112415909 112417636 + G6pc3 protein_coding processed_transcript MGP_NODShiLtJ_T0012476.1 MGP_NODShiLtJ_G0010584.1 mouse_genomes_project 11 56905405 56905990 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029128.1 MGP_NODShiLtJ_G0018252.1 mouse_genomes_project 11 65055319 65081277 + MGP_NODShiLtJ_P0029128 Nlrp3 protein_coding protein_coding MGP_NODShiLtJ_T0029129.1 MGP_NODShiLtJ_G0018252.1 mouse_genomes_project 11 65056437 65081278 + MGP_NODShiLtJ_P0029129 Nlrp3 protein_coding protein_coding MGP_NODShiLtJ_T0029130.1 MGP_NODShiLtJ_G0018252.1 mouse_genomes_project 11 65056507 65061785 + MGP_NODShiLtJ_P0029130 Nlrp3 protein_coding protein_coding MGP_NODShiLtJ_T0011201.1 MGP_NODShiLtJ_G0009334.1 mouse_genomes_project 11 105731085 105731165 - Gm27898 misc_RNA misc_RNA MGP_NODShiLtJ_T0006158.1 MGP_NODShiLtJ_G0005139.1 mouse_genomes_project 11 42965176 43344720 + lincRNA lincRNA MGP_NODShiLtJ_T0027621.1 MGP_NODShiLtJ_G0017849.1 mouse_genomes_project 11 1945756 1955012 - MGP_NODShiLtJ_P0027621 Nefh protein_coding protein_coding MGP_NODShiLtJ_T0033664.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130484319 130921439 - MGP_NODShiLtJ_P0033664 Rbfox3 protein_coding protein_coding MGP_NODShiLtJ_T0033665.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130484321 130762102 - MGP_NODShiLtJ_P0033665 Rbfox3 protein_coding protein_coding MGP_NODShiLtJ_T0033666.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130485712 130923495 - MGP_NODShiLtJ_P0033666 Rbfox3 protein_coding protein_coding MGP_NODShiLtJ_T0033667.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130485712 130921451 - MGP_NODShiLtJ_P0033667 Rbfox3 protein_coding protein_coding MGP_NODShiLtJ_T0033668.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130485760 130921439 - MGP_NODShiLtJ_P0033668 Rbfox3 protein_coding protein_coding MGP_NODShiLtJ_T0033669.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130486551 130921441 - MGP_NODShiLtJ_P0033669 Rbfox3 protein_coding protein_coding MGP_NODShiLtJ_T0033670.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130491054 130501861 - MGP_NODShiLtJ_P0033670 Rbfox3 protein_coding protein_coding MGP_NODShiLtJ_T0033671.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130497349 130565764 - MGP_NODShiLtJ_P0033671 Rbfox3 protein_coding protein_coding MGP_NODShiLtJ_T0033672.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130813690 130897998 - Rbfox3 protein_coding processed_transcript MGP_NODShiLtJ_T0033673.1 MGP_NODShiLtJ_G0019327.1 mouse_genomes_project 11 130813692 130919894 - Rbfox3 protein_coding processed_transcript MGP_NODShiLtJ_T0012653.1 MGP_NODShiLtJ_G0010761.1 mouse_genomes_project 11 125845372 125846505 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031317.1 MGP_NODShiLtJ_G0018763.1 mouse_genomes_project 11 96135616 96146235 + MGP_NODShiLtJ_P0031317 Mks1 protein_coding protein_coding MGP_NODShiLtJ_T0031318.1 MGP_NODShiLtJ_G0018763.1 mouse_genomes_project 11 96135628 96141740 + Mks1 protein_coding retained_intron MGP_NODShiLtJ_T0031319.1 MGP_NODShiLtJ_G0018763.1 mouse_genomes_project 11 96136076 96141740 + Mks1 protein_coding retained_intron MGP_NODShiLtJ_T0031320.1 MGP_NODShiLtJ_G0018763.1 mouse_genomes_project 11 96138978 96139713 + Mks1 protein_coding retained_intron MGP_NODShiLtJ_T0031321.1 MGP_NODShiLtJ_G0018763.1 mouse_genomes_project 11 96144365 96145693 + Mks1 protein_coding retained_intron MGP_NODShiLtJ_T0028408.1 MGP_NODShiLtJ_G0018035.1 mouse_genomes_project 11 48236884 48252591 + MGP_NODShiLtJ_P0028408 Il12b protein_coding protein_coding MGP_NODShiLtJ_T0028409.1 MGP_NODShiLtJ_G0018035.1 mouse_genomes_project 11 48236884 48252612 + MGP_NODShiLtJ_P0028409 Il12b protein_coding protein_coding MGP_NODShiLtJ_T0003255.1 MGP_NODShiLtJ_G0003002.1 mouse_genomes_project 11 113656364 113661891 + Arhgap27os3 antisense antisense MGP_NODShiLtJ_T0027680.1 MGP_NODShiLtJ_G0017859.1 mouse_genomes_project 11 2615962 2634314 - MGP_NODShiLtJ_P0027680 Ccdc117 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027681.1 MGP_NODShiLtJ_G0017859.1 mouse_genomes_project 11 2618430 2634443 - MGP_NODShiLtJ_P0027681 Ccdc117 protein_coding protein_coding MGP_NODShiLtJ_T0029144.1 MGP_NODShiLtJ_G0018257.1 mouse_genomes_project 11 65321011 65339547 - MGP_NODShiLtJ_P0029144 Flcn protein_coding protein_coding MGP_NODShiLtJ_T0029145.1 MGP_NODShiLtJ_G0018257.1 mouse_genomes_project 11 65321060 65339455 - Flcn protein_coding retained_intron MGP_NODShiLtJ_T0029146.1 MGP_NODShiLtJ_G0018257.1 mouse_genomes_project 11 65321393 65339119 - MGP_NODShiLtJ_P0029146 Flcn protein_coding protein_coding MGP_NODShiLtJ_T0029147.1 MGP_NODShiLtJ_G0018257.1 mouse_genomes_project 11 65333336 65339132 - Flcn protein_coding processed_transcript MGP_NODShiLtJ_T0029148.1 MGP_NODShiLtJ_G0018257.1 mouse_genomes_project 11 65334051 65339525 - MGP_NODShiLtJ_P0029148 Flcn protein_coding protein_coding MGP_NODShiLtJ_T0029149.1 MGP_NODShiLtJ_G0018257.1 mouse_genomes_project 11 65338558 65339242 - Flcn protein_coding retained_intron MGP_NODShiLtJ_T0098665.1 MGP_NODShiLtJ_G0037059.1 mouse_genomes_project 11 10089253 10089409 - Gm24036 snRNA snRNA MGP_NODShiLtJ_T0029566.1 MGP_NODShiLtJ_G0018346.1 mouse_genomes_project 11 74179324 74201030 - Cfap52 protein_coding processed_transcript MGP_NODShiLtJ_T0029567.1 MGP_NODShiLtJ_G0018346.1 mouse_genomes_project 11 74179326 74222590 - MGP_NODShiLtJ_P0029567 Cfap52 protein_coding protein_coding MGP_NODShiLtJ_T0029568.1 MGP_NODShiLtJ_G0018346.1 mouse_genomes_project 11 74179475 74186253 - Cfap52 protein_coding processed_transcript MGP_NODShiLtJ_T0029569.1 MGP_NODShiLtJ_G0018346.1 mouse_genomes_project 11 74194340 74222599 - MGP_NODShiLtJ_P0029569 Cfap52 protein_coding protein_coding MGP_NODShiLtJ_T0006117.1 MGP_NODShiLtJ_G0005104.1 mouse_genomes_project 11 18483922 18494404 + 4933406G16Rik lincRNA lincRNA MGP_NODShiLtJ_T0032492.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112530739 112546177 - MGP_NODShiLtJ_P0032492 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032493.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112530740 112546177 - MGP_NODShiLtJ_P0032493 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032494.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112532057 112542760 - MGP_NODShiLtJ_P0032494 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032495.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112532057 112546177 - MGP_NODShiLtJ_P0032495 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032496.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112532057 112543925 - MGP_NODShiLtJ_P0032496 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032497.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112532057 112543372 - MGP_NODShiLtJ_P0032497 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032498.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112532057 112542784 - MGP_NODShiLtJ_P0032498 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032499.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112532351 112543720 - MGP_NODShiLtJ_P0032499 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032500.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112532537 112548211 - MGP_NODShiLtJ_P0032500 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032501.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112534585 112535523 - Ubtf protein_coding retained_intron MGP_NODShiLtJ_T0032502.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112535122 112535991 - Ubtf protein_coding retained_intron MGP_NODShiLtJ_T0032503.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112537837 112542755 - MGP_NODShiLtJ_P0032503 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0032504.1 MGP_NODShiLtJ_G0019084.1 mouse_genomes_project 11 112539691 112542785 - MGP_NODShiLtJ_P0032504 Ubtf protein_coding protein_coding MGP_NODShiLtJ_T0012462.1 MGP_NODShiLtJ_G0010570.1 mouse_genomes_project 11 50910693 50911038 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028383.1 MGP_NODShiLtJ_G0018027.1 mouse_genomes_project 11 47143404 47147942 + MGP_NODShiLtJ_P0028383 Slu7 protein_coding protein_coding MGP_NODShiLtJ_T0028384.1 MGP_NODShiLtJ_G0018027.1 mouse_genomes_project 11 47143404 47155055 + MGP_NODShiLtJ_P0028384 Slu7 protein_coding protein_coding MGP_NODShiLtJ_T0028385.1 MGP_NODShiLtJ_G0018027.1 mouse_genomes_project 11 47143419 47157651 + MGP_NODShiLtJ_P0028385 Slu7 protein_coding protein_coding MGP_NODShiLtJ_T0028386.1 MGP_NODShiLtJ_G0018027.1 mouse_genomes_project 11 47147008 47157651 + MGP_NODShiLtJ_P0028386 Slu7 protein_coding protein_coding MGP_NODShiLtJ_T0028387.1 MGP_NODShiLtJ_G0018027.1 mouse_genomes_project 11 47147040 47148875 + Slu7 protein_coding processed_transcript MGP_NODShiLtJ_T0028388.1 MGP_NODShiLtJ_G0018027.1 mouse_genomes_project 11 47151076 47152302 + Slu7 protein_coding processed_transcript MGP_NODShiLtJ_T0006281.1 MGP_NODShiLtJ_G0005234.1 mouse_genomes_project 11 120817636 120820234 + 1700023C21Rik lincRNA lincRNA MGP_NODShiLtJ_T0012622.1 MGP_NODShiLtJ_G0010730.1 mouse_genomes_project 11 111453711 111453931 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003157.1 MGP_NODShiLtJ_G0002924.1 mouse_genomes_project 11 73089910 73132641 - Gm12298 antisense antisense MGP_NODShiLtJ_T0097895.1 MGP_NODShiLtJ_G0036307.1 mouse_genomes_project 11 78996966 78997082 + n-R5s70 rRNA rRNA MGP_NODShiLtJ_T0098724.1 MGP_NODShiLtJ_G0037118.1 mouse_genomes_project 11 108730955 108731062 + Gm22061 snRNA snRNA MGP_NODShiLtJ_T0027826.1 MGP_NODShiLtJ_G0017896.1 mouse_genomes_project 11 6550846 6571704 + MGP_NODShiLtJ_P0027826 Gm11992 protein_coding protein_coding MGP_NODShiLtJ_T0006283.1 MGP_NODShiLtJ_G0005236.1 mouse_genomes_project 11 123016143 123021735 - Gm11674 lincRNA lincRNA MGP_NODShiLtJ_T0017123.1 MGP_NODShiLtJ_G0015072.1 mouse_genomes_project 11 107238003 107263827 + 2410003L11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017124.1 MGP_NODShiLtJ_G0015072.1 mouse_genomes_project 11 107255533 107259512 + 2410003L11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0028202.1 MGP_NODShiLtJ_G0017979.1 mouse_genomes_project 11 33531290 33594334 + MGP_NODShiLtJ_P0028202 Cpeb4 protein_coding protein_coding MGP_NODShiLtJ_T0028203.1 MGP_NODShiLtJ_G0017979.1 mouse_genomes_project 11 33531305 33599636 + MGP_NODShiLtJ_P0028203 Cpeb4 protein_coding protein_coding MGP_NODShiLtJ_T0028204.1 MGP_NODShiLtJ_G0017979.1 mouse_genomes_project 11 33532355 33599636 + MGP_NODShiLtJ_P0028204 Cpeb4 protein_coding protein_coding MGP_NODShiLtJ_T0031648.1 MGP_NODShiLtJ_G0018851.1 mouse_genomes_project 11 105823223 105828349 + MGP_NODShiLtJ_P0031648 Hoxb9 protein_coding protein_coding MGP_NODShiLtJ_T0031649.1 MGP_NODShiLtJ_G0018851.1 mouse_genomes_project 11 105823289 105828349 + MGP_NODShiLtJ_P0031649 Hoxb9 protein_coding protein_coding MGP_NODShiLtJ_T0030042.1 MGP_NODShiLtJ_G0018446.1 mouse_genomes_project 11 77045488 77053335 + MGP_NODShiLtJ_P0030042 Tm4sf5 protein_coding protein_coding MGP_NODShiLtJ_T0030043.1 MGP_NODShiLtJ_G0018446.1 mouse_genomes_project 11 77052126 77053039 + Tm4sf5 protein_coding processed_transcript MGP_NODShiLtJ_T0030044.1 MGP_NODShiLtJ_G0018446.1 mouse_genomes_project 11 77052362 77053124 + Tm4sf5 protein_coding retained_intron MGP_NODShiLtJ_T0033330.1 MGP_NODShiLtJ_G0019261.1 mouse_genomes_project 11 127632253 127634795 - Recql5 protein_coding retained_intron MGP_NODShiLtJ_T0033331.1 MGP_NODShiLtJ_G0019261.1 mouse_genomes_project 11 127632253 127676749 - MGP_NODShiLtJ_P0033331 Recql5 protein_coding protein_coding MGP_NODShiLtJ_T0033332.1 MGP_NODShiLtJ_G0019261.1 mouse_genomes_project 11 127632253 127676749 - MGP_NODShiLtJ_P0033332 Recql5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033333.1 MGP_NODShiLtJ_G0019261.1 mouse_genomes_project 11 127635073 127670657 - MGP_NODShiLtJ_P0033333 Recql5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033334.1 MGP_NODShiLtJ_G0019261.1 mouse_genomes_project 11 127635923 127676749 - Recql5 protein_coding retained_intron MGP_NODShiLtJ_T0033335.1 MGP_NODShiLtJ_G0019261.1 mouse_genomes_project 11 127636467 127647866 - Recql5 protein_coding processed_transcript MGP_NODShiLtJ_T0033340.1 MGP_NODShiLtJ_G0019261.1 mouse_genomes_project 11 127657727 127676749 - MGP_NODShiLtJ_P0033340 Recql5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033341.1 MGP_NODShiLtJ_G0019261.1 mouse_genomes_project 11 127668696 127670825 - Recql5 protein_coding retained_intron MGP_NODShiLtJ_T0032431.1 MGP_NODShiLtJ_G0019073.1 mouse_genomes_project 11 112315107 112317457 - MGP_NODShiLtJ_P0032431 Ppy protein_coding protein_coding MGP_NODShiLtJ_T0032432.1 MGP_NODShiLtJ_G0019073.1 mouse_genomes_project 11 112315107 112317448 - MGP_NODShiLtJ_P0032432 Ppy protein_coding protein_coding MGP_NODShiLtJ_T0006286.1 MGP_NODShiLtJ_G0005239.1 mouse_genomes_project 11 124183692 124184786 + 4933434M16Rik lincRNA lincRNA MGP_NODShiLtJ_T0006287.1 MGP_NODShiLtJ_G0005239.1 mouse_genomes_project 11 124183717 124192177 + 4933434M16Rik lincRNA lincRNA MGP_NODShiLtJ_T0009604.1 MGP_NODShiLtJ_G0007737.1 mouse_genomes_project 11 75893894 75893972 - Gm27493 miRNA miRNA MGP_NODShiLtJ_T0031253.1 MGP_NODShiLtJ_G0018752.1 mouse_genomes_project 11 95570909 95604250 - MGP_NODShiLtJ_P0031253 Rad51c protein_coding protein_coding MGP_NODShiLtJ_T0031254.1 MGP_NODShiLtJ_G0018752.1 mouse_genomes_project 11 95572841 95604233 - MGP_NODShiLtJ_P0031254 Rad51c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031255.1 MGP_NODShiLtJ_G0018752.1 mouse_genomes_project 11 95573347 95604681 - MGP_NODShiLtJ_P0031255 Rad51c protein_coding protein_coding MGP_NODShiLtJ_T0031256.1 MGP_NODShiLtJ_G0018752.1 mouse_genomes_project 11 95573634 95604160 - MGP_NODShiLtJ_P0031256 Rad51c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027581.1 MGP_NODShiLtJ_G0017840.1 mouse_genomes_project 11 1434596 1566089 - MGP_NODShiLtJ_P0027581 Mtmr3 protein_coding protein_coding MGP_NODShiLtJ_T0027582.1 MGP_NODShiLtJ_G0017840.1 mouse_genomes_project 11 1434603 1442096 - Mtmr3 protein_coding processed_transcript MGP_NODShiLtJ_T0027583.1 MGP_NODShiLtJ_G0017840.1 mouse_genomes_project 11 1434603 1502951 - MGP_NODShiLtJ_P0027583 Mtmr3 protein_coding protein_coding MGP_NODShiLtJ_T0027584.1 MGP_NODShiLtJ_G0017840.1 mouse_genomes_project 11 1434618 1485106 - MGP_NODShiLtJ_P0027584 Mtmr3 protein_coding protein_coding MGP_NODShiLtJ_T0027585.1 MGP_NODShiLtJ_G0017840.1 mouse_genomes_project 11 1436288 1566137 - MGP_NODShiLtJ_P0027585 Mtmr3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027586.1 MGP_NODShiLtJ_G0017840.1 mouse_genomes_project 11 1436481 1485106 - MGP_NODShiLtJ_P0027586 Mtmr3 protein_coding protein_coding MGP_NODShiLtJ_T0027587.1 MGP_NODShiLtJ_G0017840.1 mouse_genomes_project 11 1445536 1447048 - Mtmr3 protein_coding processed_transcript MGP_NODShiLtJ_T0009679.1 MGP_NODShiLtJ_G0007812.1 mouse_genomes_project 11 131177772 131177834 - Mir6934 miRNA miRNA MGP_NODShiLtJ_T0009625.1 MGP_NODShiLtJ_G0007758.1 mouse_genomes_project 11 84366676 84366785 - Mir423 miRNA miRNA MGP_NODShiLtJ_T0009663.1 MGP_NODShiLtJ_G0007796.1 mouse_genomes_project 11 113288165 113288239 - Mir6931 miRNA miRNA MGP_NODShiLtJ_T0031831.1 MGP_NODShiLtJ_G0018893.1 mouse_genomes_project 11 107506176 107508443 + MGP_NODShiLtJ_P0031831 B230217C12Rik protein_coding protein_coding MGP_NODShiLtJ_T0031832.1 MGP_NODShiLtJ_G0018893.1 mouse_genomes_project 11 107506688 107509504 + B230217C12Rik protein_coding lincRNA MGP_NODShiLtJ_T0031833.1 MGP_NODShiLtJ_G0018893.1 mouse_genomes_project 11 107506710 107509222 + B230217C12Rik protein_coding processed_transcript MGP_NODShiLtJ_T0031834.1 MGP_NODShiLtJ_G0018893.1 mouse_genomes_project 11 107506714 107508443 + B230217C12Rik protein_coding processed_transcript MGP_NODShiLtJ_T0030020.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76965422 76968785 + Arrb2 protein_coding retained_intron MGP_NODShiLtJ_T0030021.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76965424 76973463 + MGP_NODShiLtJ_P0030021 Arrb2 protein_coding protein_coding MGP_NODShiLtJ_T0030022.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76965424 76973463 + MGP_NODShiLtJ_P0030022 Arrb2 protein_coding protein_coding MGP_NODShiLtJ_T0030023.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76965432 76973617 + MGP_NODShiLtJ_P0030023 Arrb2 protein_coding protein_coding MGP_NODShiLtJ_T0030024.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76965464 76970394 + MGP_NODShiLtJ_P0030024 Arrb2 protein_coding protein_coding MGP_NODShiLtJ_T0030025.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76965469 76971536 + MGP_NODShiLtJ_P0030025 Arrb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030026.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76965518 76973592 + MGP_NODShiLtJ_P0030026 Arrb2 protein_coding protein_coding MGP_NODShiLtJ_T0030027.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76969487 76973022 + Arrb2 protein_coding retained_intron MGP_NODShiLtJ_T0030028.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76969691 76971511 + Arrb2 protein_coding retained_intron MGP_NODShiLtJ_T0030029.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76970080 76972342 + Arrb2 protein_coding retained_intron MGP_NODShiLtJ_T0030030.1 MGP_NODShiLtJ_G0018442.1 mouse_genomes_project 11 76971370 76973017 + Arrb2 protein_coding retained_intron MGP_NODShiLtJ_T0003274.1 MGP_NODShiLtJ_G0003019.1 mouse_genomes_project 11 118809321 118809931 + Gm11657 antisense antisense MGP_NODShiLtJ_T0003317.1 MGP_NODShiLtJ_G0003050.1 mouse_genomes_project 11 132799895 132802554 + Notumos antisense antisense MGP_NODShiLtJ_T0032038.1 MGP_NODShiLtJ_G0018958.1 mouse_genomes_project 11 109488781 109489623 - MGP_NODShiLtJ_P0032038 Krtap2-4 protein_coding protein_coding MGP_NODShiLtJ_T0031594.1 MGP_NODShiLtJ_G0018833.1 mouse_genomes_project 11 104828129 104898350 + MGP_NODShiLtJ_P0031594 Spop protein_coding protein_coding MGP_NODShiLtJ_T0031595.1 MGP_NODShiLtJ_G0018833.1 mouse_genomes_project 11 104828129 104918594 + MGP_NODShiLtJ_P0031595 Spop protein_coding protein_coding MGP_NODShiLtJ_T0031596.1 MGP_NODShiLtJ_G0018833.1 mouse_genomes_project 11 104828198 104898371 + MGP_NODShiLtJ_P0031596 Spop protein_coding protein_coding MGP_NODShiLtJ_T0031597.1 MGP_NODShiLtJ_G0018833.1 mouse_genomes_project 11 104828287 104918594 + MGP_NODShiLtJ_P0031597 Spop protein_coding protein_coding MGP_NODShiLtJ_T0031598.1 MGP_NODShiLtJ_G0018833.1 mouse_genomes_project 11 104898354 104915506 + Spop protein_coding processed_transcript MGP_NODShiLtJ_T0006218.1 MGP_NODShiLtJ_G0005191.1 mouse_genomes_project 11 85334646 85352683 - Gm11190 lincRNA lincRNA MGP_NODShiLtJ_T0029931.1 MGP_NODShiLtJ_G0018424.1 mouse_genomes_project 11 76461646 76469191 + MGP_NODShiLtJ_P0029931 Phf23 protein_coding protein_coding MGP_NODShiLtJ_T0029932.1 MGP_NODShiLtJ_G0018424.1 mouse_genomes_project 11 76461764 76467558 + Phf23 protein_coding retained_intron MGP_NODShiLtJ_T0029933.1 MGP_NODShiLtJ_G0018424.1 mouse_genomes_project 11 76461790 76469188 + MGP_NODShiLtJ_P0029933 Phf23 protein_coding protein_coding MGP_NODShiLtJ_T0029934.1 MGP_NODShiLtJ_G0018424.1 mouse_genomes_project 11 76462500 76467933 + MGP_NODShiLtJ_P0029934 Phf23 protein_coding protein_coding MGP_NODShiLtJ_T0029935.1 MGP_NODShiLtJ_G0018424.1 mouse_genomes_project 11 76464740 76467678 + Phf23 protein_coding processed_transcript MGP_NODShiLtJ_T0029936.1 MGP_NODShiLtJ_G0018424.1 mouse_genomes_project 11 76464756 76467579 + Phf23 protein_coding processed_transcript MGP_NODShiLtJ_T0003190.1 MGP_NODShiLtJ_G0002953.1 mouse_genomes_project 11 90528426 90529868 - Gm11423 antisense antisense MGP_NODShiLtJ_T0003191.1 MGP_NODShiLtJ_G0002953.1 mouse_genomes_project 11 90528656 90529868 - Gm11423 antisense antisense MGP_NODShiLtJ_T0032700.1 MGP_NODShiLtJ_G0019124.1 mouse_genomes_project 11 114316461 114337044 + MGP_NODShiLtJ_P0032700 Arf2 protein_coding protein_coding MGP_NODShiLtJ_T0032701.1 MGP_NODShiLtJ_G0019124.1 mouse_genomes_project 11 114316593 114337044 + MGP_NODShiLtJ_P0032701 Arf2 protein_coding protein_coding MGP_NODShiLtJ_T0032702.1 MGP_NODShiLtJ_G0019124.1 mouse_genomes_project 11 114324660 114333605 + Arf2 protein_coding retained_intron MGP_NODShiLtJ_T0032703.1 MGP_NODShiLtJ_G0019124.1 mouse_genomes_project 11 114331295 114335334 + MGP_NODShiLtJ_P0032703 Arf2 protein_coding protein_coding MGP_NODShiLtJ_T0097746.1 MGP_NODShiLtJ_G0036158.1 mouse_genomes_project 11 77087462 77088040 - pseudogene pseudogene MGP_NODShiLtJ_T0000830.1 MGP_NODShiLtJ_G0000760.1 mouse_genomes_project 11 105498001 105498826 - TEC TEC MGP_NODShiLtJ_T0028440.1 MGP_NODShiLtJ_G0018043.1 mouse_genomes_project 11 49992034 50099602 + MGP_NODShiLtJ_P0028440 Adam19 protein_coding protein_coding MGP_NODShiLtJ_T0028441.1 MGP_NODShiLtJ_G0018043.1 mouse_genomes_project 11 49992100 50002609 + Adam19 protein_coding processed_transcript MGP_NODShiLtJ_T0028442.1 MGP_NODShiLtJ_G0018043.1 mouse_genomes_project 11 50080339 50096107 + Adam19 protein_coding processed_transcript MGP_NODShiLtJ_T0028443.1 MGP_NODShiLtJ_G0018043.1 mouse_genomes_project 11 50086381 50089886 + Adam19 protein_coding retained_intron MGP_NODShiLtJ_T0099906.1 MGP_NODShiLtJ_G0038300.1 mouse_genomes_project 11 10775862 10775992 + Gm22789 snoRNA snoRNA MGP_NODShiLtJ_T0098264.1 MGP_NODShiLtJ_G0036673.1 mouse_genomes_project 11 130874317 130875255 - Gm11749 sense_intronic sense_intronic MGP_NODShiLtJ_T0030798.1 MGP_NODShiLtJ_G0018628.1 mouse_genomes_project 11 85924202 85930451 + MGP_NODShiLtJ_P0030798 Slc46a1 protein_coding protein_coding MGP_NODShiLtJ_T0030799.1 MGP_NODShiLtJ_G0018628.1 mouse_genomes_project 11 85924255 85930128 + MGP_NODShiLtJ_P0030799 Slc46a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030800.1 MGP_NODShiLtJ_G0018628.1 mouse_genomes_project 11 85928731 85930565 + Slc46a1 protein_coding retained_intron MGP_NODShiLtJ_T0033867.1 MGP_NODShiLtJ_G0019366.1 mouse_genomes_project 11 132680609 132681763 - MGP_NODShiLtJ_P0033867 Ppp1r27 protein_coding protein_coding MGP_NODShiLtJ_T0030774.1 MGP_NODShiLtJ_G0018622.1 mouse_genomes_project 11 85750220 85776384 + MGP_NODShiLtJ_P0030774 Spag5 protein_coding protein_coding MGP_NODShiLtJ_T0030775.1 MGP_NODShiLtJ_G0018622.1 mouse_genomes_project 11 85750315 85767740 + Spag5 protein_coding retained_intron MGP_NODShiLtJ_T0030776.1 MGP_NODShiLtJ_G0018622.1 mouse_genomes_project 11 85750346 85767413 + Spag5 protein_coding retained_intron MGP_NODShiLtJ_T0030777.1 MGP_NODShiLtJ_G0018622.1 mouse_genomes_project 11 85765664 85766634 + Spag5 protein_coding retained_intron MGP_NODShiLtJ_T0030778.1 MGP_NODShiLtJ_G0018622.1 mouse_genomes_project 11 85767906 85769968 + Spag5 protein_coding retained_intron MGP_NODShiLtJ_T0030779.1 MGP_NODShiLtJ_G0018622.1 mouse_genomes_project 11 85769826 85773825 + Spag5 protein_coding retained_intron MGP_NODShiLtJ_T0030780.1 MGP_NODShiLtJ_G0018622.1 mouse_genomes_project 11 85771888 85774302 + Spag5 protein_coding processed_transcript MGP_NODShiLtJ_T0030781.1 MGP_NODShiLtJ_G0018622.1 mouse_genomes_project 11 85773852 85774667 + Spag5 protein_coding retained_intron MGP_NODShiLtJ_T0012531.1 MGP_NODShiLtJ_G0010639.1 mouse_genomes_project 11 76037773 76037955 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027784.1 MGP_NODShiLtJ_G0017884.1 mouse_genomes_project 11 3815077 3824355 - MGP_NODShiLtJ_P0027784 Nacad protein_coding protein_coding MGP_NODShiLtJ_T0027785.1 MGP_NODShiLtJ_G0017884.1 mouse_genomes_project 11 3815146 3816646 - MGP_NODShiLtJ_P0027785 Nacad protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027786.1 MGP_NODShiLtJ_G0017884.1 mouse_genomes_project 11 3815157 3817198 - MGP_NODShiLtJ_P0027786 Nacad protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031838.1 MGP_NODShiLtJ_G0018895.1 mouse_genomes_project 11 107609097 107680919 - MGP_NODShiLtJ_P0031838 Plxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0031839.1 MGP_NODShiLtJ_G0018895.1 mouse_genomes_project 11 107609515 107680874 - MGP_NODShiLtJ_P0031839 Plxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0031840.1 MGP_NODShiLtJ_G0018895.1 mouse_genomes_project 11 107624727 107680908 - Plxdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0031841.1 MGP_NODShiLtJ_G0018895.1 mouse_genomes_project 11 107673065 107680905 - MGP_NODShiLtJ_P0031841 Plxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0031183.1 MGP_NODShiLtJ_G0018734.1 mouse_genomes_project 11 93988738 94020605 + MGP_NODShiLtJ_P0031183 Tbx4 protein_coding protein_coding MGP_NODShiLtJ_T0031184.1 MGP_NODShiLtJ_G0018734.1 mouse_genomes_project 11 93992379 94020607 + MGP_NODShiLtJ_P0031184 Tbx4 protein_coding protein_coding MGP_NODShiLtJ_T0031185.1 MGP_NODShiLtJ_G0018734.1 mouse_genomes_project 11 93997661 94019255 + MGP_NODShiLtJ_P0031185 Tbx4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098709.1 MGP_NODShiLtJ_G0037103.1 mouse_genomes_project 11 94585025 94585131 - Gm26439 snRNA snRNA MGP_NODShiLtJ_T0029414.1 MGP_NODShiLtJ_G0018305.1 mouse_genomes_project 11 68239577 68309086 + MGP_NODShiLtJ_P0029414 Pigl protein_coding protein_coding MGP_NODShiLtJ_T0029415.1 MGP_NODShiLtJ_G0018305.1 mouse_genomes_project 11 68239725 68305233 + Pigl protein_coding processed_transcript MGP_NODShiLtJ_T0012573.1 MGP_NODShiLtJ_G0010681.1 mouse_genomes_project 11 90490626 90491028 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017129.1 MGP_NODShiLtJ_G0015077.1 mouse_genomes_project 11 108440818 108441313 - Gm12356 processed_transcript processed_transcript MGP_NODShiLtJ_T0006293.1 MGP_NODShiLtJ_G0005242.1 mouse_genomes_project 11 125558641 125562554 + 1700025D23Rik lincRNA lincRNA MGP_NODShiLtJ_T0012445.1 MGP_NODShiLtJ_G0010553.1 mouse_genomes_project 11 42580598 42581241 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098736.1 MGP_NODShiLtJ_G0037130.1 mouse_genomes_project 11 120444579 120444690 - Gm22378 snRNA snRNA MGP_NODShiLtJ_T0030957.1 MGP_NODShiLtJ_G0018672.1 mouse_genomes_project 11 89742759 89747818 + MGP_NODShiLtJ_P0030957 Ccl11 protein_coding protein_coding MGP_NODShiLtJ_T0012353.1 MGP_NODShiLtJ_G0010461.1 mouse_genomes_project 11 3913070 3914056 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030034.1 MGP_NODShiLtJ_G0018444.1 mouse_genomes_project 11 76989777 76996995 - MGP_NODShiLtJ_P0030034 Cxcl16 protein_coding protein_coding MGP_NODShiLtJ_T0030035.1 MGP_NODShiLtJ_G0018444.1 mouse_genomes_project 11 76990032 76996419 - MGP_NODShiLtJ_P0030035 Cxcl16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030036.1 MGP_NODShiLtJ_G0018444.1 mouse_genomes_project 11 76990664 76996843 - Cxcl16 protein_coding retained_intron MGP_NODShiLtJ_T0028502.1 MGP_NODShiLtJ_G0018061.1 mouse_genomes_project 11 53049544 53060088 - Irgm1 protein_coding processed_transcript MGP_NODShiLtJ_T0028503.1 MGP_NODShiLtJ_G0018061.1 mouse_genomes_project 11 53052821 53059779 - MGP_NODShiLtJ_P0028503 Irgm1 protein_coding protein_coding MGP_NODShiLtJ_T0028504.1 MGP_NODShiLtJ_G0018061.1 mouse_genomes_project 11 53053694 53059825 - MGP_NODShiLtJ_P0028504 Irgm1 protein_coding protein_coding MGP_NODShiLtJ_T0012527.1 MGP_NODShiLtJ_G0010635.1 mouse_genomes_project 11 74300847 74301519 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0034073.1 MGP_NODShiLtJ_G0019410.1 mouse_genomes_project 11 134060826 134067368 + Ptchd3 protein_coding retained_intron MGP_NODShiLtJ_T0034074.1 MGP_NODShiLtJ_G0019410.1 mouse_genomes_project 11 134060826 134074003 + MGP_NODShiLtJ_P0034074 Ptchd3 protein_coding protein_coding MGP_NODShiLtJ_T0003277.1 MGP_NODShiLtJ_G0003022.1 mouse_genomes_project 11 119825243 119827948 - Gm11670 antisense antisense MGP_NODShiLtJ_T0028926.1 MGP_NODShiLtJ_G0018174.1 mouse_genomes_project 11 59925930 59933067 + MGP_NODShiLtJ_P0028926 Gpx3 protein_coding protein_coding MGP_NODShiLtJ_T0028927.1 MGP_NODShiLtJ_G0018174.1 mouse_genomes_project 11 59926249 59933868 + MGP_NODShiLtJ_P0028927 Gpx3 protein_coding protein_coding MGP_NODShiLtJ_T0028928.1 MGP_NODShiLtJ_G0018174.1 mouse_genomes_project 11 59926403 59933025 + MGP_NODShiLtJ_P0028928 Gpx3 protein_coding protein_coding MGP_NODShiLtJ_T0030915.1 MGP_NODShiLtJ_G0018660.1 mouse_genomes_project 11 87952234 87969504 - MGP_NODShiLtJ_P0030915 5730455P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0030916.1 MGP_NODShiLtJ_G0018660.1 mouse_genomes_project 11 87952240 87969487 - MGP_NODShiLtJ_P0030916 5730455P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0030917.1 MGP_NODShiLtJ_G0018660.1 mouse_genomes_project 11 87961919 87969487 - MGP_NODShiLtJ_P0030917 5730455P16Rik protein_coding protein_coding MGP_NODShiLtJ_T0032243.1 MGP_NODShiLtJ_G0019034.1 mouse_genomes_project 11 111154639 111179439 - Fam134c protein_coding processed_transcript MGP_NODShiLtJ_T0032244.1 MGP_NODShiLtJ_G0019034.1 mouse_genomes_project 11 111154830 111179439 - MGP_NODShiLtJ_P0032244 Fam134c protein_coding protein_coding MGP_NODShiLtJ_T0032245.1 MGP_NODShiLtJ_G0019034.1 mouse_genomes_project 11 111154836 111178939 - MGP_NODShiLtJ_P0032245 Fam134c protein_coding protein_coding MGP_NODShiLtJ_T0032246.1 MGP_NODShiLtJ_G0019034.1 mouse_genomes_project 11 111156317 111178997 - Fam134c protein_coding processed_transcript MGP_NODShiLtJ_T0032247.1 MGP_NODShiLtJ_G0019034.1 mouse_genomes_project 11 111156900 111179439 - Fam134c protein_coding processed_transcript MGP_NODShiLtJ_T0017140.1 MGP_NODShiLtJ_G0015087.1 mouse_genomes_project 11 118596565 118599646 + Gm11650 processed_transcript processed_transcript MGP_NODShiLtJ_T0033031.1 MGP_NODShiLtJ_G0019198.1 mouse_genomes_project 11 121297170 121376151 - MGP_NODShiLtJ_P0033031 protein_coding protein_coding MGP_NODShiLtJ_T0033032.1 MGP_NODShiLtJ_G0019198.1 mouse_genomes_project 11 121316878 121376095 - MGP_NODShiLtJ_P0033032 protein_coding protein_coding MGP_NODShiLtJ_T0033033.1 MGP_NODShiLtJ_G0019198.1 mouse_genomes_project 11 121345350 121376118 - protein_coding retained_intron MGP_NODShiLtJ_T0033034.1 MGP_NODShiLtJ_G0019198.1 mouse_genomes_project 11 121357150 121376113 - MGP_NODShiLtJ_P0033034 protein_coding protein_coding MGP_NODShiLtJ_T0033035.1 MGP_NODShiLtJ_G0019198.1 mouse_genomes_project 11 121363239 121376189 - protein_coding processed_transcript MGP_NODShiLtJ_T0031353.1 MGP_NODShiLtJ_G0018773.1 mouse_genomes_project 11 96663464 96664666 + MGP_NODShiLtJ_P0031353 Ccdc182 protein_coding protein_coding MGP_NODShiLtJ_T0101574.1 MGP_NODShiLtJ_G0039744.1 mouse_genomes_project 11 110205557 110208791 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0027515.1 MGP_NODShiLtJ_G0017824.1 mouse_genomes_project 11 812005 831679 - MGP_NODShiLtJ_P0027515 Tcn2 protein_coding protein_coding MGP_NODShiLtJ_T0027516.1 MGP_NODShiLtJ_G0017824.1 mouse_genomes_project 11 812005 831864 - MGP_NODShiLtJ_P0027516 Tcn2 protein_coding protein_coding MGP_NODShiLtJ_T0027517.1 MGP_NODShiLtJ_G0017824.1 mouse_genomes_project 11 812005 832063 - MGP_NODShiLtJ_P0027517 Tcn2 protein_coding protein_coding MGP_NODShiLtJ_T0027518.1 MGP_NODShiLtJ_G0017824.1 mouse_genomes_project 11 812005 831982 - MGP_NODShiLtJ_P0027518 Tcn2 protein_coding protein_coding MGP_NODShiLtJ_T0027519.1 MGP_NODShiLtJ_G0017824.1 mouse_genomes_project 11 812005 831948 - MGP_NODShiLtJ_P0027519 Tcn2 protein_coding protein_coding MGP_NODShiLtJ_T0027520.1 MGP_NODShiLtJ_G0017824.1 mouse_genomes_project 11 812005 831899 - MGP_NODShiLtJ_P0027520 Tcn2 protein_coding protein_coding MGP_NODShiLtJ_T0027521.1 MGP_NODShiLtJ_G0017824.1 mouse_genomes_project 11 812005 831694 - MGP_NODShiLtJ_P0027521 Tcn2 protein_coding protein_coding MGP_NODShiLtJ_T0030059.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77113004 77169824 + MGP_NODShiLtJ_P0030059 Mink1 protein_coding protein_coding MGP_NODShiLtJ_T0030060.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77113008 77172072 + MGP_NODShiLtJ_P0030060 Mink1 protein_coding protein_coding MGP_NODShiLtJ_T0030061.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77113017 77170240 + MGP_NODShiLtJ_P0030061 Mink1 protein_coding protein_coding MGP_NODShiLtJ_T0030062.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77113025 77172068 + MGP_NODShiLtJ_P0030062 Mink1 protein_coding protein_coding MGP_NODShiLtJ_T0030063.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77113144 77172073 + MGP_NODShiLtJ_P0030063 Mink1 protein_coding protein_coding MGP_NODShiLtJ_T0030064.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77113197 77169824 + MGP_NODShiLtJ_P0030064 Mink1 protein_coding protein_coding MGP_NODShiLtJ_T0030065.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77151623 77157560 + Mink1 protein_coding processed_transcript MGP_NODShiLtJ_T0030066.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77156728 77159953 + MGP_NODShiLtJ_P0030066 Mink1 protein_coding protein_coding MGP_NODShiLtJ_T0030067.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77156751 77159608 + MGP_NODShiLtJ_P0030067 Mink1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030068.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77159229 77160302 + Mink1 protein_coding retained_intron MGP_NODShiLtJ_T0030069.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77160340 77161357 + Mink1 protein_coding retained_intron MGP_NODShiLtJ_T0030070.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77162266 77165448 + Mink1 protein_coding retained_intron MGP_NODShiLtJ_T0030071.1 MGP_NODShiLtJ_G0018451.1 mouse_genomes_project 11 77164789 77167091 + Mink1 protein_coding retained_intron MGP_NODShiLtJ_T0028016.1 MGP_NODShiLtJ_G0017941.1 mouse_genomes_project 11 23006197 23019490 + MGP_NODShiLtJ_P0028016 Fam161a protein_coding protein_coding MGP_NODShiLtJ_T0028017.1 MGP_NODShiLtJ_G0017941.1 mouse_genomes_project 11 23007107 23029279 + MGP_NODShiLtJ_P0028017 Fam161a protein_coding protein_coding MGP_NODShiLtJ_T0028018.1 MGP_NODShiLtJ_G0017941.1 mouse_genomes_project 11 23007131 23022990 + MGP_NODShiLtJ_P0028018 Fam161a protein_coding protein_coding MGP_NODShiLtJ_T0028019.1 MGP_NODShiLtJ_G0017941.1 mouse_genomes_project 11 23012047 23022980 + MGP_NODShiLtJ_P0028019 Fam161a protein_coding protein_coding MGP_NODShiLtJ_T0028020.1 MGP_NODShiLtJ_G0017941.1 mouse_genomes_project 11 23019723 23030572 + MGP_NODShiLtJ_P0028020 Fam161a protein_coding protein_coding MGP_NODShiLtJ_T0028021.1 MGP_NODShiLtJ_G0017941.1 mouse_genomes_project 11 23019809 23022979 + MGP_NODShiLtJ_P0028021 Fam161a protein_coding protein_coding MGP_NODShiLtJ_T0033342.1 MGP_NODShiLtJ_G0019264.1 mouse_genomes_project 11 127676553 127709484 + MGP_NODShiLtJ_P0033342 Sap30bp protein_coding protein_coding MGP_NODShiLtJ_T0033343.1 MGP_NODShiLtJ_G0019264.1 mouse_genomes_project 11 127676844 127700548 + Sap30bp protein_coding processed_transcript MGP_NODShiLtJ_T0033344.1 MGP_NODShiLtJ_G0019264.1 mouse_genomes_project 11 127676908 127681677 + Sap30bp protein_coding processed_transcript MGP_NODShiLtJ_T0033345.1 MGP_NODShiLtJ_G0019264.1 mouse_genomes_project 11 127676945 127708294 + Sap30bp protein_coding processed_transcript MGP_NODShiLtJ_T0033346.1 MGP_NODShiLtJ_G0019264.1 mouse_genomes_project 11 127676947 127707179 + MGP_NODShiLtJ_P0033346 Sap30bp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012386.1 MGP_NODShiLtJ_G0010494.1 mouse_genomes_project 11 19212011 19212641 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030230.1 MGP_NODShiLtJ_G0018482.1 mouse_genomes_project 11 78959527 78984180 - MGP_NODShiLtJ_P0030230 Slc13a5 protein_coding protein_coding MGP_NODShiLtJ_T0030231.1 MGP_NODShiLtJ_G0018482.1 mouse_genomes_project 11 78977912 78984180 - MGP_NODShiLtJ_P0030231 Slc13a5 protein_coding protein_coding MGP_NODShiLtJ_T0030232.1 MGP_NODShiLtJ_G0018482.1 mouse_genomes_project 11 78979217 78984800 - MGP_NODShiLtJ_P0030232 Slc13a5 protein_coding protein_coding MGP_NODShiLtJ_T0031010.1 MGP_NODShiLtJ_G0018686.1 mouse_genomes_project 11 90742116 90756644 - MGP_NODShiLtJ_P0031010 Slfn9 protein_coding protein_coding MGP_NODShiLtJ_T0030357.1 MGP_NODShiLtJ_G0018524.1 mouse_genomes_project 11 80756675 80757614 - MGP_NODShiLtJ_P0030357 Olfr393 protein_coding protein_coding MGP_NODShiLtJ_T0009612.1 MGP_NODShiLtJ_G0007745.1 mouse_genomes_project 11 76732203 76732297 + Mir195a miRNA miRNA MGP_NODShiLtJ_T0000824.1 MGP_NODShiLtJ_G0000754.1 mouse_genomes_project 11 18533505 18534361 - TEC TEC MGP_NODShiLtJ_T0031326.1 MGP_NODShiLtJ_G0018767.1 mouse_genomes_project 11 96217233 96218317 - MGP_NODShiLtJ_P0031326 Olfr464 protein_coding protein_coding MGP_NODShiLtJ_T0031327.1 MGP_NODShiLtJ_G0018767.1 mouse_genomes_project 11 96217878 96219817 - MGP_NODShiLtJ_P0031327 Olfr464 protein_coding protein_coding MGP_NODShiLtJ_T0012396.1 MGP_NODShiLtJ_G0010504.1 mouse_genomes_project 11 20917791 20918403 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006292.1 MGP_NODShiLtJ_G0005241.1 mouse_genomes_project 11 124598167 124604530 - 4732490B19Rik lincRNA lincRNA MGP_NODShiLtJ_T0028624.1 MGP_NODShiLtJ_G0018100.1 mouse_genomes_project 11 54880019 54885257 + MGP_NODShiLtJ_P0028624 Cby3 protein_coding protein_coding MGP_NODShiLtJ_T0028625.1 MGP_NODShiLtJ_G0018100.1 mouse_genomes_project 11 54883318 54885257 + MGP_NODShiLtJ_P0028625 Cby3 protein_coding protein_coding MGP_NODShiLtJ_T0012656.1 MGP_NODShiLtJ_G0010764.1 mouse_genomes_project 11 126505524 126505925 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017056.1 MGP_NODShiLtJ_G0015036.1 mouse_genomes_project 11 44978832 45304520 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017057.1 MGP_NODShiLtJ_G0015036.1 mouse_genomes_project 11 45194542 45312680 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017058.1 MGP_NODShiLtJ_G0015036.1 mouse_genomes_project 11 45298709 45310674 + processed_transcript processed_transcript MGP_NODShiLtJ_T0032071.1 MGP_NODShiLtJ_G0018991.1 mouse_genomes_project 11 110054610 110059190 - Krt32 protein_coding processed_transcript MGP_NODShiLtJ_T0032072.1 MGP_NODShiLtJ_G0018991.1 mouse_genomes_project 11 110054619 110061983 - MGP_NODShiLtJ_P0032072 Krt32 protein_coding protein_coding MGP_NODShiLtJ_T0003187.1 MGP_NODShiLtJ_G0002950.1 mouse_genomes_project 11 88740529 88751460 + Gm11417 antisense antisense MGP_NODShiLtJ_T0031599.1 MGP_NODShiLtJ_G0018834.1 mouse_genomes_project 11 104935040 104939753 - MGP_NODShiLtJ_P0031599 Nxph3 protein_coding protein_coding MGP_NODShiLtJ_T0003103.1 MGP_NODShiLtJ_G0002878.1 mouse_genomes_project 11 55261507 55262753 - Gm12199 antisense antisense MGP_NODShiLtJ_T0003300.1 MGP_NODShiLtJ_G0003037.1 mouse_genomes_project 11 129133408 129139199 - Gm16045 antisense antisense MGP_NODShiLtJ_T0006107.1 MGP_NODShiLtJ_G0005095.1 mouse_genomes_project 11 1212683 1220613 + Gm11959 lincRNA lincRNA MGP_NODShiLtJ_T0012602.1 MGP_NODShiLtJ_G0010710.1 mouse_genomes_project 11 105218005 105218180 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029610.1 MGP_NODShiLtJ_G0018356.1 mouse_genomes_project 11 75243490 75248882 + MGP_NODShiLtJ_P0029610 Rpl26 protein_coding protein_coding MGP_NODShiLtJ_T0029611.1 MGP_NODShiLtJ_G0018356.1 mouse_genomes_project 11 75243517 75248858 + MGP_NODShiLtJ_P0029611 Rpl26 protein_coding protein_coding MGP_NODShiLtJ_T0029612.1 MGP_NODShiLtJ_G0018356.1 mouse_genomes_project 11 75243534 75246069 + MGP_NODShiLtJ_P0029612 Rpl26 protein_coding protein_coding MGP_NODShiLtJ_T0029613.1 MGP_NODShiLtJ_G0018356.1 mouse_genomes_project 11 75243542 75248881 + MGP_NODShiLtJ_P0029613 Rpl26 protein_coding protein_coding MGP_NODShiLtJ_T0029614.1 MGP_NODShiLtJ_G0018356.1 mouse_genomes_project 11 75245602 75248881 + Rpl26 protein_coding retained_intron MGP_NODShiLtJ_T0029615.1 MGP_NODShiLtJ_G0018356.1 mouse_genomes_project 11 75245983 75251337 + Rpl26 protein_coding processed_transcript MGP_NODShiLtJ_T0098678.1 MGP_NODShiLtJ_G0037072.1 mouse_genomes_project 11 42712185 42712330 + Gm24192 snRNA snRNA MGP_NODShiLtJ_T0030347.1 MGP_NODShiLtJ_G0018518.1 mouse_genomes_project 11 80440552 80441790 + MGP_NODShiLtJ_P0030347 Olfr384 protein_coding protein_coding MGP_NODShiLtJ_T0030301.1 MGP_NODShiLtJ_G0018499.1 mouse_genomes_project 11 79876529 79924264 + MGP_NODShiLtJ_P0030301 Itgae protein_coding protein_coding MGP_NODShiLtJ_T0030302.1 MGP_NODShiLtJ_G0018499.1 mouse_genomes_project 11 79876529 79937504 + MGP_NODShiLtJ_P0030302 Itgae protein_coding protein_coding MGP_NODShiLtJ_T0101044.1 MGP_NODShiLtJ_G0039415.1 mouse_genomes_project 11 118297222 118297597 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0017092.1 MGP_NODShiLtJ_G0015057.1 mouse_genomes_project 11 82972514 83004627 + Gm12339 processed_transcript antisense MGP_NODShiLtJ_T0017093.1 MGP_NODShiLtJ_G0015057.1 mouse_genomes_project 11 82972966 83004645 + Gm12339 processed_transcript processed_transcript MGP_NODShiLtJ_T0006176.1 MGP_NODShiLtJ_G0005156.1 mouse_genomes_project 11 56837446 56840704 - 9430098F02Rik lincRNA lincRNA MGP_NODShiLtJ_T0098705.1 MGP_NODShiLtJ_G0037099.1 mouse_genomes_project 11 91125151 91126291 + Gm23444 snRNA snRNA MGP_NODShiLtJ_T0033080.1 MGP_NODShiLtJ_G0019209.1 mouse_genomes_project 11 125171003 125196333 - MGP_NODShiLtJ_P0033080 Cdc42ep4 protein_coding protein_coding MGP_NODShiLtJ_T0033081.1 MGP_NODShiLtJ_G0019209.1 mouse_genomes_project 11 125171005 125196896 - MGP_NODShiLtJ_P0033081 Cdc42ep4 protein_coding protein_coding MGP_NODShiLtJ_T0033082.1 MGP_NODShiLtJ_G0019209.1 mouse_genomes_project 11 125173136 125183474 - MGP_NODShiLtJ_P0033082 Cdc42ep4 protein_coding protein_coding MGP_NODShiLtJ_T0033083.1 MGP_NODShiLtJ_G0019209.1 mouse_genomes_project 11 125173458 125196169 - MGP_NODShiLtJ_P0033083 Cdc42ep4 protein_coding protein_coding MGP_NODShiLtJ_T0032052.1 MGP_NODShiLtJ_G0018972.1 mouse_genomes_project 11 109714944 109715834 - MGP_NODShiLtJ_P0032052 protein_coding protein_coding MGP_NODShiLtJ_T0006258.1 MGP_NODShiLtJ_G0005217.1 mouse_genomes_project 11 105145815 105147963 - Gm9796 lincRNA lincRNA MGP_NODShiLtJ_T0012512.1 MGP_NODShiLtJ_G0010620.1 mouse_genomes_project 11 66289330 66289711 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012484.1 MGP_NODShiLtJ_G0010592.1 mouse_genomes_project 11 58629983 58630336 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030413.1 MGP_NODShiLtJ_G0018548.1 mouse_genomes_project 11 81965313 82011277 - MGP_NODShiLtJ_P0030413 Sgsm2 protein_coding protein_coding MGP_NODShiLtJ_T0030414.1 MGP_NODShiLtJ_G0018548.1 mouse_genomes_project 11 81965318 82011277 - MGP_NODShiLtJ_P0030414 Sgsm2 protein_coding protein_coding MGP_NODShiLtJ_T0030415.1 MGP_NODShiLtJ_G0018548.1 mouse_genomes_project 11 81975526 81979507 - Sgsm2 protein_coding retained_intron MGP_NODShiLtJ_T0030416.1 MGP_NODShiLtJ_G0018548.1 mouse_genomes_project 11 81986276 81987940 - Sgsm2 protein_coding retained_intron MGP_NODShiLtJ_T0030417.1 MGP_NODShiLtJ_G0018548.1 mouse_genomes_project 11 81986286 81987236 - Sgsm2 protein_coding retained_intron MGP_NODShiLtJ_T0099957.1 MGP_NODShiLtJ_G0038351.1 mouse_genomes_project 11 107443525 107443662 - Snora21 snoRNA snoRNA MGP_NODShiLtJ_T0012664.1 MGP_NODShiLtJ_G0010772.1 mouse_genomes_project 11 128993218 128993666 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101570.1 MGP_NODShiLtJ_G0039740.1 mouse_genomes_project 11 109603306 109603443 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0027768.1 MGP_NODShiLtJ_G0017881.1 mouse_genomes_project 11 3645652 3657070 - MGP_NODShiLtJ_P0027768 Purb protein_coding protein_coding MGP_NODShiLtJ_T0030654.1 MGP_NODShiLtJ_G0018600.1 mouse_genomes_project 11 84881184 84969407 - MGP_NODShiLtJ_P0030654 Taok1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098676.1 MGP_NODShiLtJ_G0037070.1 mouse_genomes_project 11 36720347 36720454 + Gm25799 snRNA snRNA MGP_NODShiLtJ_T0030528.1 MGP_NODShiLtJ_G0018572.1 mouse_genomes_project 11 83010606 83121410 - MGP_NODShiLtJ_P0030528 Rph3al protein_coding protein_coding MGP_NODShiLtJ_T0030529.1 MGP_NODShiLtJ_G0018572.1 mouse_genomes_project 11 83011744 83093500 - MGP_NODShiLtJ_P0030529 Rph3al protein_coding protein_coding MGP_NODShiLtJ_T0030530.1 MGP_NODShiLtJ_G0018572.1 mouse_genomes_project 11 83082133 83108286 - MGP_NODShiLtJ_P0030530 Rph3al protein_coding protein_coding MGP_NODShiLtJ_T0030531.1 MGP_NODShiLtJ_G0018572.1 mouse_genomes_project 11 83083150 83121369 - MGP_NODShiLtJ_P0030531 Rph3al protein_coding protein_coding MGP_NODShiLtJ_T0030532.1 MGP_NODShiLtJ_G0018572.1 mouse_genomes_project 11 83088971 83122101 - MGP_NODShiLtJ_P0030532 Rph3al protein_coding protein_coding MGP_NODShiLtJ_T0028619.1 MGP_NODShiLtJ_G0018099.1 mouse_genomes_project 11 54814583 54849143 - MGP_NODShiLtJ_P0028619 Canx protein_coding protein_coding MGP_NODShiLtJ_T0028620.1 MGP_NODShiLtJ_G0018099.1 mouse_genomes_project 11 54815089 54849143 - MGP_NODShiLtJ_P0028620 Canx protein_coding protein_coding MGP_NODShiLtJ_T0028621.1 MGP_NODShiLtJ_G0018099.1 mouse_genomes_project 11 54816821 54820001 - Canx protein_coding processed_transcript MGP_NODShiLtJ_T0028622.1 MGP_NODShiLtJ_G0018099.1 mouse_genomes_project 11 54817986 54818942 - Canx protein_coding processed_transcript MGP_NODShiLtJ_T0028623.1 MGP_NODShiLtJ_G0018099.1 mouse_genomes_project 11 54819460 54821613 - Canx protein_coding processed_transcript MGP_NODShiLtJ_T0032035.1 MGP_NODShiLtJ_G0018955.1 mouse_genomes_project 11 109473915 109476300 - MGP_NODShiLtJ_P0032035 Gm11938 protein_coding protein_coding MGP_NODShiLtJ_T0031241.1 MGP_NODShiLtJ_G0018747.1 mouse_genomes_project 11 95256351 95266815 - MGP_NODShiLtJ_P0031241 Smg8 protein_coding protein_coding MGP_NODShiLtJ_T0031242.1 MGP_NODShiLtJ_G0018747.1 mouse_genomes_project 11 95256355 95265423 - MGP_NODShiLtJ_P0031242 Smg8 protein_coding protein_coding MGP_NODShiLtJ_T0028098.1 MGP_NODShiLtJ_G0017957.1 mouse_genomes_project 11 29558640 29819284 - MGP_NODShiLtJ_P0028098 Ccdc85a protein_coding protein_coding MGP_NODShiLtJ_T0028099.1 MGP_NODShiLtJ_G0017957.1 mouse_genomes_project 11 29558646 29819312 - MGP_NODShiLtJ_P0028099 Ccdc85a protein_coding protein_coding MGP_NODShiLtJ_T0028100.1 MGP_NODShiLtJ_G0017957.1 mouse_genomes_project 11 29561480 29818983 - MGP_NODShiLtJ_P0028100 Ccdc85a protein_coding protein_coding MGP_NODShiLtJ_T0028101.1 MGP_NODShiLtJ_G0017957.1 mouse_genomes_project 11 29562514 29819284 - MGP_NODShiLtJ_P0028101 Ccdc85a protein_coding protein_coding MGP_NODShiLtJ_T0028102.1 MGP_NODShiLtJ_G0017957.1 mouse_genomes_project 11 29563751 29813111 - MGP_NODShiLtJ_P0028102 Ccdc85a protein_coding protein_coding MGP_NODShiLtJ_T0028103.1 MGP_NODShiLtJ_G0017957.1 mouse_genomes_project 11 29811883 29819254 - Ccdc85a protein_coding retained_intron MGP_NODShiLtJ_T0033714.1 MGP_NODShiLtJ_G0019337.1 mouse_genomes_project 11 131383942 131397752 - MGP_NODShiLtJ_P0033714 Sgsh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033715.1 MGP_NODShiLtJ_G0019337.1 mouse_genomes_project 11 131386759 131397780 - Sgsh protein_coding processed_transcript MGP_NODShiLtJ_T0033716.1 MGP_NODShiLtJ_G0019337.1 mouse_genomes_project 11 131386795 131397759 - MGP_NODShiLtJ_P0033716 Sgsh protein_coding protein_coding MGP_NODShiLtJ_T0033717.1 MGP_NODShiLtJ_G0019337.1 mouse_genomes_project 11 131386935 131388379 - Sgsh protein_coding processed_transcript MGP_NODShiLtJ_T0033718.1 MGP_NODShiLtJ_G0019337.1 mouse_genomes_project 11 131387316 131394949 - Sgsh protein_coding processed_transcript MGP_NODShiLtJ_T0033770.1 MGP_NODShiLtJ_G0019346.1 mouse_genomes_project 11 132150064 132172365 - MGP_NODShiLtJ_P0033770 Cep131 protein_coding protein_coding MGP_NODShiLtJ_T0033771.1 MGP_NODShiLtJ_G0019346.1 mouse_genomes_project 11 132150068 132150603 - Cep131 protein_coding processed_transcript MGP_NODShiLtJ_T0033772.1 MGP_NODShiLtJ_G0019346.1 mouse_genomes_project 11 132150273 132153692 - Cep131 protein_coding processed_transcript MGP_NODShiLtJ_T0033773.1 MGP_NODShiLtJ_G0019346.1 mouse_genomes_project 11 132152763 132156542 - Cep131 protein_coding processed_transcript MGP_NODShiLtJ_T0033774.1 MGP_NODShiLtJ_G0019346.1 mouse_genomes_project 11 132153723 132157657 - Cep131 protein_coding processed_transcript MGP_NODShiLtJ_T0032056.1 MGP_NODShiLtJ_G0018976.1 mouse_genomes_project 11 109781698 109782843 + MGP_NODShiLtJ_P0032056 Gm11568 protein_coding protein_coding MGP_NODShiLtJ_T0099899.1 MGP_NODShiLtJ_G0038293.1 mouse_genomes_project 11 3736531 3736664 - Snora9 snoRNA snoRNA MGP_NODShiLtJ_T0009587.1 MGP_NODShiLtJ_G0007720.1 mouse_genomes_project 11 56839670 56839761 + Mir3061 miRNA miRNA MGP_NODShiLtJ_T0032866.1 MGP_NODShiLtJ_G0019164.1 mouse_genomes_project 11 117422059 117443458 + MGP_NODShiLtJ_P0032866 Milr1 protein_coding protein_coding MGP_NODShiLtJ_T0032867.1 MGP_NODShiLtJ_G0019164.1 mouse_genomes_project 11 117422073 117441787 + MGP_NODShiLtJ_P0032867 Milr1 protein_coding protein_coding MGP_NODShiLtJ_T0032868.1 MGP_NODShiLtJ_G0019164.1 mouse_genomes_project 11 117422073 117441787 + MGP_NODShiLtJ_P0032868 Milr1 protein_coding protein_coding MGP_NODShiLtJ_T0032869.1 MGP_NODShiLtJ_G0019164.1 mouse_genomes_project 11 117422073 117442205 + MGP_NODShiLtJ_P0032869 Milr1 protein_coding protein_coding MGP_NODShiLtJ_T0032870.1 MGP_NODShiLtJ_G0019164.1 mouse_genomes_project 11 117422098 117443383 + MGP_NODShiLtJ_P0032870 Milr1 protein_coding protein_coding MGP_NODShiLtJ_T0032871.1 MGP_NODShiLtJ_G0019164.1 mouse_genomes_project 11 117422101 117443381 + MGP_NODShiLtJ_P0032871 Milr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032872.1 MGP_NODShiLtJ_G0019164.1 mouse_genomes_project 11 117422101 117442429 + MGP_NODShiLtJ_P0032872 Milr1 protein_coding protein_coding MGP_NODShiLtJ_T0032873.1 MGP_NODShiLtJ_G0019164.1 mouse_genomes_project 11 117425787 117443384 + MGP_NODShiLtJ_P0032873 Milr1 protein_coding protein_coding MGP_NODShiLtJ_T0099911.1 MGP_NODShiLtJ_G0038305.1 mouse_genomes_project 11 23192837 23192946 - Gm24398 snoRNA snoRNA MGP_NODShiLtJ_T0033008.1 MGP_NODShiLtJ_G0019192.1 mouse_genomes_project 11 120629704 120685126 - MGP_NODShiLtJ_P0033008 Fam20a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033009.1 MGP_NODShiLtJ_G0019192.1 mouse_genomes_project 11 120632881 120685103 - MGP_NODShiLtJ_P0033009 Fam20a protein_coding protein_coding MGP_NODShiLtJ_T0033010.1 MGP_NODShiLtJ_G0019192.1 mouse_genomes_project 11 120633255 120684562 - MGP_NODShiLtJ_P0033010 Fam20a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033011.1 MGP_NODShiLtJ_G0019192.1 mouse_genomes_project 11 120634188 120637622 - Fam20a protein_coding retained_intron MGP_NODShiLtJ_T0033012.1 MGP_NODShiLtJ_G0019192.1 mouse_genomes_project 11 120635838 120644206 - Fam20a protein_coding retained_intron MGP_NODShiLtJ_T0027996.1 MGP_NODShiLtJ_G0017936.1 mouse_genomes_project 11 22822892 22980071 - MGP_NODShiLtJ_P0027996 Gm28048 protein_coding protein_coding MGP_NODShiLtJ_T0098677.1 MGP_NODShiLtJ_G0037071.1 mouse_genomes_project 11 38627326 38627432 + Gm22127 snRNA snRNA MGP_NODShiLtJ_T0101577.1 MGP_NODShiLtJ_G0039747.1 mouse_genomes_project 11 132911803 132913876 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0028772.1 MGP_NODShiLtJ_G0018136.1 mouse_genomes_project 11 57104677 57140589 + MGP_NODShiLtJ_P0028772 Vdac1 protein_coding protein_coding MGP_NODShiLtJ_T0028773.1 MGP_NODShiLtJ_G0018136.1 mouse_genomes_project 11 57104952 57139691 + MGP_NODShiLtJ_P0028773 Vdac1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028774.1 MGP_NODShiLtJ_G0018136.1 mouse_genomes_project 11 57125416 57128098 + Vdac1 protein_coding processed_transcript MGP_NODShiLtJ_T0028775.1 MGP_NODShiLtJ_G0018136.1 mouse_genomes_project 11 57125579 57139718 + MGP_NODShiLtJ_P0028775 Vdac1 protein_coding protein_coding MGP_NODShiLtJ_T0028776.1 MGP_NODShiLtJ_G0018136.1 mouse_genomes_project 11 57138377 57139986 + Vdac1 protein_coding retained_intron MGP_NODShiLtJ_T0006288.1 MGP_NODShiLtJ_G0005240.1 mouse_genomes_project 11 124427181 124596723 - 2610035D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0006289.1 MGP_NODShiLtJ_G0005240.1 mouse_genomes_project 11 124427181 124564717 - 2610035D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0006290.1 MGP_NODShiLtJ_G0005240.1 mouse_genomes_project 11 124427181 124596707 - 2610035D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0006291.1 MGP_NODShiLtJ_G0005240.1 mouse_genomes_project 11 124427803 124564717 - 2610035D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0032004.1 MGP_NODShiLtJ_G0018934.1 mouse_genomes_project 11 109047694 109069379 - MGP_NODShiLtJ_P0032004 Smarce1 protein_coding protein_coding MGP_NODShiLtJ_T0032005.1 MGP_NODShiLtJ_G0018934.1 mouse_genomes_project 11 109048642 109051701 - Smarce1 protein_coding processed_transcript MGP_NODShiLtJ_T0032006.1 MGP_NODShiLtJ_G0018934.1 mouse_genomes_project 11 109057564 109059177 - Smarce1 protein_coding processed_transcript MGP_NODShiLtJ_T0032007.1 MGP_NODShiLtJ_G0018934.1 mouse_genomes_project 11 109057973 109068807 - Smarce1 protein_coding processed_transcript MGP_NODShiLtJ_T0032008.1 MGP_NODShiLtJ_G0018934.1 mouse_genomes_project 11 109058053 109068775 - Smarce1 protein_coding processed_transcript MGP_NODShiLtJ_T0032009.1 MGP_NODShiLtJ_G0018934.1 mouse_genomes_project 11 109063653 109068808 - Smarce1 protein_coding processed_transcript MGP_NODShiLtJ_T0003130.1 MGP_NODShiLtJ_G0002902.1 mouse_genomes_project 11 64879068 64883513 + Gm15755 antisense antisense MGP_NODShiLtJ_T0012461.1 MGP_NODShiLtJ_G0010569.1 mouse_genomes_project 11 50555821 50556398 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032017.1 MGP_NODShiLtJ_G0018939.1 mouse_genomes_project 11 109194460 109199997 - MGP_NODShiLtJ_P0032017 Krt27 protein_coding protein_coding MGP_NODShiLtJ_T0000336.1 MGP_NODShiLtJ_G0000274.1 mouse_genomes_project 11 48222680 48222733 - mt-Tk Mt_tRNA Mt_tRNA MGP_NODShiLtJ_T0011181.1 MGP_NODShiLtJ_G0009314.1 mouse_genomes_project 11 527968 528145 - Gm27624 misc_RNA misc_RNA MGP_NODShiLtJ_T0099945.1 MGP_NODShiLtJ_G0038339.1 mouse_genomes_project 11 85037677 85037809 - Gm23132 snoRNA snoRNA MGP_NODShiLtJ_T0027554.1 MGP_NODShiLtJ_G0017833.1 mouse_genomes_project 11 1065722 1072281 - Ccdc157 protein_coding processed_transcript MGP_NODShiLtJ_T0027555.1 MGP_NODShiLtJ_G0017833.1 mouse_genomes_project 11 1065778 1085875 - MGP_NODShiLtJ_P0027555 Ccdc157 protein_coding protein_coding MGP_NODShiLtJ_T0027556.1 MGP_NODShiLtJ_G0017833.1 mouse_genomes_project 11 1073429 1085826 - Ccdc157 protein_coding processed_transcript MGP_NODShiLtJ_T0027557.1 MGP_NODShiLtJ_G0017833.1 mouse_genomes_project 11 1075217 1085826 - Ccdc157 protein_coding processed_transcript MGP_NODShiLtJ_T0027558.1 MGP_NODShiLtJ_G0017833.1 mouse_genomes_project 11 1076700 1085860 - Ccdc157 protein_coding processed_transcript MGP_NODShiLtJ_T0012520.1 MGP_NODShiLtJ_G0010628.1 mouse_genomes_project 11 68508494 68508792 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032684.1 MGP_NODShiLtJ_G0019119.1 mouse_genomes_project 11 113962057 113963067 + MGP_NODShiLtJ_P0032684 Rprml protein_coding protein_coding MGP_NODShiLtJ_T0033216.1 MGP_NODShiLtJ_G0019244.1 mouse_genomes_project 11 127133189 127140908 + MGP_NODShiLtJ_P0033216 Trim80 protein_coding protein_coding MGP_NODShiLtJ_T0031456.1 MGP_NODShiLtJ_G0018802.1 mouse_genomes_project 11 103519803 103523832 + MGP_NODShiLtJ_P0031456 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031457.1 MGP_NODShiLtJ_G0018802.1 mouse_genomes_project 11 103519836 103523832 + MGP_NODShiLtJ_P0031457 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031458.1 MGP_NODShiLtJ_G0018802.1 mouse_genomes_project 11 103522504 103523832 + MGP_NODShiLtJ_P0031458 protein_coding protein_coding MGP_NODShiLtJ_T0028990.1 MGP_NODShiLtJ_G0018194.1 mouse_genomes_project 11 63317577 63374407 + MGP_NODShiLtJ_P0028990 Larp1 protein_coding protein_coding MGP_NODShiLtJ_T0028991.1 MGP_NODShiLtJ_G0018194.1 mouse_genomes_project 11 63317577 63374410 + MGP_NODShiLtJ_P0028991 Larp1 protein_coding protein_coding MGP_NODShiLtJ_T0028992.1 MGP_NODShiLtJ_G0018194.1 mouse_genomes_project 11 63352024 63353424 + Larp1 protein_coding retained_intron MGP_NODShiLtJ_T0027739.1 MGP_NODShiLtJ_G0017874.1 mouse_genomes_project 11 3366919 3386048 - MGP_NODShiLtJ_P0027739 Npc1l1 protein_coding protein_coding MGP_NODShiLtJ_T0033135.1 MGP_NODShiLtJ_G0019221.1 mouse_genomes_project 11 126572738 126604280 - MGP_NODShiLtJ_P0033135 Cd300ld protein_coding protein_coding MGP_NODShiLtJ_T0030652.1 MGP_NODShiLtJ_G0018599.1 mouse_genomes_project 11 84856848 84859389 - MGP_NODShiLtJ_P0030652 Gm10392 protein_coding protein_coding MGP_NODShiLtJ_T0032571.1 MGP_NODShiLtJ_G0019095.1 mouse_genomes_project 11 112951285 112964359 - MGP_NODShiLtJ_P0032571 Ccdc43 protein_coding protein_coding MGP_NODShiLtJ_T0032572.1 MGP_NODShiLtJ_G0019095.1 mouse_genomes_project 11 112951287 112964311 - MGP_NODShiLtJ_P0032572 Ccdc43 protein_coding protein_coding MGP_NODShiLtJ_T0032573.1 MGP_NODShiLtJ_G0019095.1 mouse_genomes_project 11 112952949 112964113 - Ccdc43 protein_coding processed_transcript MGP_NODShiLtJ_T0032574.1 MGP_NODShiLtJ_G0019095.1 mouse_genomes_project 11 112954940 112964311 - Ccdc43 protein_coding processed_transcript MGP_NODShiLtJ_T0032575.1 MGP_NODShiLtJ_G0019095.1 mouse_genomes_project 11 112956336 112964247 - Ccdc43 protein_coding processed_transcript MGP_NODShiLtJ_T0029391.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68078907 68238450 - MGP_NODShiLtJ_P0029391 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029392.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68078907 68216995 - MGP_NODShiLtJ_P0029392 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029393.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68079166 68144540 - MGP_NODShiLtJ_P0029393 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029394.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68080077 68085205 - MGP_NODShiLtJ_P0029394 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029395.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68080273 68124646 - MGP_NODShiLtJ_P0029395 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029396.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68080273 68216961 - MGP_NODShiLtJ_P0029396 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029397.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68080273 68125422 - MGP_NODShiLtJ_P0029397 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029398.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68089287 68093996 - Ncor1 protein_coding retained_intron MGP_NODShiLtJ_T0029399.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68089537 68094120 - Ncor1 protein_coding retained_intron MGP_NODShiLtJ_T0029400.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68091156 68094895 - Ncor1 protein_coding retained_intron MGP_NODShiLtJ_T0029401.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68104406 68109642 - Ncor1 protein_coding retained_intron MGP_NODShiLtJ_T0029402.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68106971 68115854 - Ncor1 protein_coding processed_transcript MGP_NODShiLtJ_T0029403.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68109525 68158882 - MGP_NODShiLtJ_P0029403 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029404.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68118369 68134528 - Ncor1 protein_coding processed_transcript MGP_NODShiLtJ_T0029405.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68132199 68216995 - Ncor1 protein_coding retained_intron MGP_NODShiLtJ_T0029406.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68138385 68149230 - MGP_NODShiLtJ_P0029406 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029407.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68138430 68150865 - MGP_NODShiLtJ_P0029407 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029408.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68138450 68149379 - MGP_NODShiLtJ_P0029408 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029409.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68138452 68238924 - MGP_NODShiLtJ_P0029409 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029410.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68142648 68149288 - Ncor1 protein_coding retained_intron MGP_NODShiLtJ_T0029411.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68150778 68216995 - MGP_NODShiLtJ_P0029411 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0029412.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68158271 68161415 - Ncor1 protein_coding retained_intron MGP_NODShiLtJ_T0029413.1 MGP_NODShiLtJ_G0018304.1 mouse_genomes_project 11 68188122 68239659 - MGP_NODShiLtJ_P0029413 Ncor1 protein_coding protein_coding MGP_NODShiLtJ_T0031932.1 MGP_NODShiLtJ_G0018919.1 mouse_genomes_project 11 108464476 108466786 + MGP_NODShiLtJ_P0031932 Csf3 protein_coding protein_coding MGP_NODShiLtJ_T0032662.1 MGP_NODShiLtJ_G0019113.1 mouse_genomes_project 11 113506287 113516593 - MGP_NODShiLtJ_P0032662 Spata32 protein_coding protein_coding MGP_NODShiLtJ_T0101556.1 MGP_NODShiLtJ_G0039726.1 mouse_genomes_project 11 81302375 81306517 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099958.1 MGP_NODShiLtJ_G0038352.1 mouse_genomes_project 11 108474142 108474246 - Gm22059 snoRNA snoRNA MGP_NODShiLtJ_T0003225.1 MGP_NODShiLtJ_G0002977.1 mouse_genomes_project 11 106339738 106341206 + Gm11537 antisense antisense MGP_NODShiLtJ_T0032023.1 MGP_NODShiLtJ_G0018945.1 mouse_genomes_project 11 109374412 109381636 - MGP_NODShiLtJ_P0032023 Krt39 protein_coding protein_coding MGP_NODShiLtJ_T0032024.1 MGP_NODShiLtJ_G0018945.1 mouse_genomes_project 11 109374922 109381556 - MGP_NODShiLtJ_P0032024 Krt39 protein_coding protein_coding MGP_NODShiLtJ_T0032039.1 MGP_NODShiLtJ_G0018959.1 mouse_genomes_project 11 109503663 109504708 - MGP_NODShiLtJ_P0032039 Krtap4-1 protein_coding protein_coding MGP_NODShiLtJ_T0031152.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 92987091 93183069 - MGP_NODShiLtJ_P0031152 Usp32 protein_coding protein_coding MGP_NODShiLtJ_T0031153.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 92988297 93038465 - MGP_NODShiLtJ_P0031153 Usp32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031154.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 92988920 92991240 - MGP_NODShiLtJ_P0031154 Usp32 protein_coding protein_coding MGP_NODShiLtJ_T0031155.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 93036490 93053870 - MGP_NODShiLtJ_P0031155 Usp32 protein_coding protein_coding MGP_NODShiLtJ_T0031156.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 93048516 93063994 - MGP_NODShiLtJ_P0031156 Usp32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031157.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 93070786 93074540 - Usp32 protein_coding retained_intron MGP_NODShiLtJ_T0031158.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 93112775 93183462 - Usp32 protein_coding processed_transcript MGP_NODShiLtJ_T0031159.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 93137213 93183269 - Usp32 protein_coding processed_transcript MGP_NODShiLtJ_T0031160.1 MGP_NODShiLtJ_G0018727.1 mouse_genomes_project 11 93142085 93183230 - Usp32 protein_coding retained_intron MGP_NODShiLtJ_T0032060.1 MGP_NODShiLtJ_G0018980.1 mouse_genomes_project 11 109866042 109866963 + MGP_NODShiLtJ_P0032060 Gm11565 protein_coding protein_coding MGP_NODShiLtJ_T0030829.1 MGP_NODShiLtJ_G0018636.1 mouse_genomes_project 11 86002975 86013787 - MGP_NODShiLtJ_P0030829 Tmem97 protein_coding protein_coding MGP_NODShiLtJ_T0031117.1 MGP_NODShiLtJ_G0018721.1 mouse_genomes_project 11 92808023 92816163 - MGP_NODShiLtJ_P0031117 Dhrs11 protein_coding protein_coding MGP_NODShiLtJ_T0031118.1 MGP_NODShiLtJ_G0018721.1 mouse_genomes_project 11 92809159 92816193 - MGP_NODShiLtJ_P0031118 Dhrs11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028984.1 MGP_NODShiLtJ_G0018191.1 mouse_genomes_project 11 62887856 63038533 + MGP_NODShiLtJ_P0028984 Galnt10 protein_coding protein_coding MGP_NODShiLtJ_T0028985.1 MGP_NODShiLtJ_G0018191.1 mouse_genomes_project 11 62887879 62978712 + MGP_NODShiLtJ_P0028985 Galnt10 protein_coding protein_coding MGP_NODShiLtJ_T0033252.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127293355 127313566 - MGP_NODShiLtJ_P0033252 Gga3 protein_coding protein_coding MGP_NODShiLtJ_T0033253.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127293355 127313566 - MGP_NODShiLtJ_P0033253 Gga3 protein_coding protein_coding MGP_NODShiLtJ_T0033254.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127293355 127313566 - MGP_NODShiLtJ_P0033254 Gga3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033255.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127293464 127298429 - Gga3 protein_coding processed_transcript MGP_NODShiLtJ_T0033256.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127294804 127298156 - Gga3 protein_coding processed_transcript MGP_NODShiLtJ_T0033257.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127294887 127313399 - Gga3 protein_coding processed_transcript MGP_NODShiLtJ_T0033258.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127296685 127297128 - Gga3 protein_coding processed_transcript MGP_NODShiLtJ_T0033259.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127297036 127313391 - Gga3 protein_coding processed_transcript MGP_NODShiLtJ_T0033260.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127297577 127313403 - Gga3 protein_coding processed_transcript MGP_NODShiLtJ_T0033261.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127300549 127313408 - MGP_NODShiLtJ_P0033261 Gga3 protein_coding protein_coding MGP_NODShiLtJ_T0033262.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127301406 127313239 - Gga3 protein_coding processed_transcript MGP_NODShiLtJ_T0033263.1 MGP_NODShiLtJ_G0019251.1 mouse_genomes_project 11 127301424 127313395 - Gga3 protein_coding processed_transcript MGP_NODShiLtJ_T0030865.1 MGP_NODShiLtJ_G0018648.1 mouse_genomes_project 11 87016978 87027962 - MGP_NODShiLtJ_P0030865 protein_coding protein_coding MGP_NODShiLtJ_T0012644.1 MGP_NODShiLtJ_G0010752.1 mouse_genomes_project 11 119259886 119260370 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029853.1 MGP_NODShiLtJ_G0018412.1 mouse_genomes_project 11 76335027 76338177 - MGP_NODShiLtJ_P0029853 Kctd11 protein_coding protein_coding MGP_NODShiLtJ_T0009600.1 MGP_NODShiLtJ_G0007733.1 mouse_genomes_project 11 71812528 71812628 - Mir744 miRNA miRNA MGP_NODShiLtJ_T0003290.1 MGP_NODShiLtJ_G0003031.1 mouse_genomes_project 11 127668300 127669408 + Recql5os1 antisense antisense MGP_NODShiLtJ_T0031549.1 MGP_NODShiLtJ_G0018822.1 mouse_genomes_project 11 104361323 104362187 + MGP_NODShiLtJ_P0031549 Hils1 protein_coding protein_coding MGP_NODShiLtJ_T0012673.1 MGP_NODShiLtJ_G0010781.1 mouse_genomes_project 11 134135484 134135911 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030238.1 MGP_NODShiLtJ_G0018484.1 mouse_genomes_project 11 79035889 79041644 + MGP_NODShiLtJ_P0030238 Fbxo39 protein_coding protein_coding MGP_NODShiLtJ_T0012371.1 MGP_NODShiLtJ_G0010479.1 mouse_genomes_project 11 13950236 13951336 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028515.1 MGP_NODShiLtJ_G0018069.1 mouse_genomes_project 11 53413450 53434412 + MGP_NODShiLtJ_P0028515 Ifi47 protein_coding protein_coding MGP_NODShiLtJ_T0028516.1 MGP_NODShiLtJ_G0018069.1 mouse_genomes_project 11 53424323 53432874 + Ifi47 protein_coding processed_transcript MGP_NODShiLtJ_T0028518.1 MGP_NODShiLtJ_G0018069.1 mouse_genomes_project 11 53424662 53434410 + MGP_NODShiLtJ_P0028518 Ifi47 protein_coding protein_coding MGP_NODShiLtJ_T0030295.1 MGP_NODShiLtJ_G0018497.1 mouse_genomes_project 11 79801273 79824320 + Camkk1 protein_coding retained_intron MGP_NODShiLtJ_T0030296.1 MGP_NODShiLtJ_G0018497.1 mouse_genomes_project 11 79801308 79824331 + MGP_NODShiLtJ_P0030296 Camkk1 protein_coding protein_coding MGP_NODShiLtJ_T0030297.1 MGP_NODShiLtJ_G0018497.1 mouse_genomes_project 11 79808850 79822550 + MGP_NODShiLtJ_P0030297 Camkk1 protein_coding protein_coding MGP_NODShiLtJ_T0031734.1 MGP_NODShiLtJ_G0018873.1 mouse_genomes_project 11 106643053 106660433 + MGP_NODShiLtJ_P0031734 Osbpl7 protein_coding protein_coding MGP_NODShiLtJ_T0031735.1 MGP_NODShiLtJ_G0018873.1 mouse_genomes_project 11 106643245 106645237 + Osbpl7 protein_coding processed_transcript MGP_NODShiLtJ_T0031736.1 MGP_NODShiLtJ_G0018873.1 mouse_genomes_project 11 106643245 106660433 + MGP_NODShiLtJ_P0031736 Osbpl7 protein_coding protein_coding MGP_NODShiLtJ_T0031737.1 MGP_NODShiLtJ_G0018873.1 mouse_genomes_project 11 106644739 106645389 + Osbpl7 protein_coding retained_intron MGP_NODShiLtJ_T0031738.1 MGP_NODShiLtJ_G0018873.1 mouse_genomes_project 11 106645619 106649289 + Osbpl7 protein_coding retained_intron MGP_NODShiLtJ_T0031739.1 MGP_NODShiLtJ_G0018873.1 mouse_genomes_project 11 106658410 106659800 + Osbpl7 protein_coding retained_intron MGP_NODShiLtJ_T0006163.1 MGP_NODShiLtJ_G0005144.1 mouse_genomes_project 11 48093748 48095492 - Gm12154 lincRNA lincRNA MGP_NODShiLtJ_T0032111.1 MGP_NODShiLtJ_G0019006.1 mouse_genomes_project 11 110411138 110417517 - MGP_NODShiLtJ_P0032111 P3h4 protein_coding protein_coding MGP_NODShiLtJ_T0032112.1 MGP_NODShiLtJ_G0019006.1 mouse_genomes_project 11 110412048 110414557 - MGP_NODShiLtJ_P0032112 P3h4 protein_coding protein_coding MGP_NODShiLtJ_T0033485.1 MGP_NODShiLtJ_G0019289.1 mouse_genomes_project 11 128369461 128380484 + Aanat protein_coding processed_transcript MGP_NODShiLtJ_T0033486.1 MGP_NODShiLtJ_G0019289.1 mouse_genomes_project 11 128376849 128380831 + MGP_NODShiLtJ_P0033486 Aanat protein_coding protein_coding MGP_NODShiLtJ_T0033487.1 MGP_NODShiLtJ_G0019289.1 mouse_genomes_project 11 128376849 128380696 + MGP_NODShiLtJ_P0033487 Aanat protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033488.1 MGP_NODShiLtJ_G0019289.1 mouse_genomes_project 11 128378736 128380696 + MGP_NODShiLtJ_P0033488 Aanat protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033489.1 MGP_NODShiLtJ_G0019289.1 mouse_genomes_project 11 128378931 128379416 + Aanat protein_coding processed_transcript MGP_NODShiLtJ_T0029825.1 MGP_NODShiLtJ_G0018402.1 mouse_genomes_project 11 76234421 76247865 - MGP_NODShiLtJ_P0029825 Chrnb1 protein_coding protein_coding MGP_NODShiLtJ_T0029826.1 MGP_NODShiLtJ_G0018402.1 mouse_genomes_project 11 76244625 76246192 - Chrnb1 protein_coding retained_intron MGP_NODShiLtJ_T0029827.1 MGP_NODShiLtJ_G0018402.1 mouse_genomes_project 11 76244700 76245736 - Chrnb1 protein_coding retained_intron MGP_NODShiLtJ_T0029828.1 MGP_NODShiLtJ_G0018402.1 mouse_genomes_project 11 76245435 76247827 - Chrnb1 protein_coding processed_transcript MGP_NODShiLtJ_T0031993.1 MGP_NODShiLtJ_G0018931.1 mouse_genomes_project 11 108840192 108855875 + MGP_NODShiLtJ_P0031993 Igfbp4 protein_coding protein_coding MGP_NODShiLtJ_T0031994.1 MGP_NODShiLtJ_G0018931.1 mouse_genomes_project 11 108840708 108851560 + MGP_NODShiLtJ_P0031994 Igfbp4 protein_coding protein_coding MGP_NODShiLtJ_T0031995.1 MGP_NODShiLtJ_G0018931.1 mouse_genomes_project 11 108841134 108848219 + Igfbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0031996.1 MGP_NODShiLtJ_G0018931.1 mouse_genomes_project 11 108842564 108851779 + Igfbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0031997.1 MGP_NODShiLtJ_G0018931.1 mouse_genomes_project 11 108843733 108851674 + Igfbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0031998.1 MGP_NODShiLtJ_G0018931.1 mouse_genomes_project 11 108847154 108851671 + MGP_NODShiLtJ_P0031998 Igfbp4 protein_coding protein_coding MGP_NODShiLtJ_T0033043.1 MGP_NODShiLtJ_G0019200.1 mouse_genomes_project 11 122074386 122137715 + MGP_NODShiLtJ_P0033043 Kcnj16 protein_coding protein_coding MGP_NODShiLtJ_T0033044.1 MGP_NODShiLtJ_G0019200.1 mouse_genomes_project 11 122074386 122137718 + MGP_NODShiLtJ_P0033044 Kcnj16 protein_coding protein_coding MGP_NODShiLtJ_T0033045.1 MGP_NODShiLtJ_G0019200.1 mouse_genomes_project 11 122074417 122134613 + MGP_NODShiLtJ_P0033045 Kcnj16 protein_coding protein_coding MGP_NODShiLtJ_T0033046.1 MGP_NODShiLtJ_G0019200.1 mouse_genomes_project 11 122106563 122137718 + MGP_NODShiLtJ_P0033046 Kcnj16 protein_coding protein_coding MGP_NODShiLtJ_T0033047.1 MGP_NODShiLtJ_G0019200.1 mouse_genomes_project 11 122133653 122134502 + MGP_NODShiLtJ_P0033047 Kcnj16 protein_coding protein_coding MGP_NODShiLtJ_T0033048.1 MGP_NODShiLtJ_G0019200.1 mouse_genomes_project 11 122133653 122137715 + MGP_NODShiLtJ_P0033048 Kcnj16 protein_coding protein_coding MGP_NODShiLtJ_T0028521.1 MGP_NODShiLtJ_G0018071.1 mouse_genomes_project 11 53451328 53453424 - MGP_NODShiLtJ_P0028521 Olfr1396 protein_coding protein_coding MGP_NODShiLtJ_T0029523.1 MGP_NODShiLtJ_G0018334.1 mouse_genomes_project 11 73239381 73252038 + MGP_NODShiLtJ_P0029523 Sco1 protein_coding protein_coding MGP_NODShiLtJ_T0029524.1 MGP_NODShiLtJ_G0018334.1 mouse_genomes_project 11 73239381 73252276 + MGP_NODShiLtJ_P0029524 Sco1 protein_coding protein_coding MGP_NODShiLtJ_T0029525.1 MGP_NODShiLtJ_G0018334.1 mouse_genomes_project 11 73240481 73250783 + Sco1 protein_coding processed_transcript MGP_NODShiLtJ_T0029526.1 MGP_NODShiLtJ_G0018334.1 mouse_genomes_project 11 73245033 73253774 + Sco1 protein_coding processed_transcript MGP_NODShiLtJ_T0027848.1 MGP_NODShiLtJ_G0017902.1 mouse_genomes_project 11 9667746 9700488 + MGP_NODShiLtJ_P0027848 Ikzf1 protein_coding protein_coding MGP_NODShiLtJ_T0027849.1 MGP_NODShiLtJ_G0017902.1 mouse_genomes_project 11 9667746 9750893 + MGP_NODShiLtJ_P0027849 Ikzf1 protein_coding protein_coding MGP_NODShiLtJ_T0027850.1 MGP_NODShiLtJ_G0017902.1 mouse_genomes_project 11 9668668 9771893 + MGP_NODShiLtJ_P0027850 Ikzf1 protein_coding protein_coding MGP_NODShiLtJ_T0027851.1 MGP_NODShiLtJ_G0017902.1 mouse_genomes_project 11 9668956 9772707 + MGP_NODShiLtJ_P0027851 Ikzf1 protein_coding protein_coding MGP_NODShiLtJ_T0027852.1 MGP_NODShiLtJ_G0017902.1 mouse_genomes_project 11 9668972 9758235 + MGP_NODShiLtJ_P0027852 Ikzf1 protein_coding protein_coding MGP_NODShiLtJ_T0027853.1 MGP_NODShiLtJ_G0017902.1 mouse_genomes_project 11 9669188 9769579 + MGP_NODShiLtJ_P0027853 Ikzf1 protein_coding protein_coding MGP_NODShiLtJ_T0003242.1 MGP_NODShiLtJ_G0002989.1 mouse_genomes_project 11 110270518 110284835 - Gm14206 antisense antisense MGP_NODShiLtJ_T0032096.1 MGP_NODShiLtJ_G0019003.1 mouse_genomes_project 11 110333157 110335747 + MGP_NODShiLtJ_P0032096 Gast protein_coding protein_coding MGP_NODShiLtJ_T0028558.1 MGP_NODShiLtJ_G0018079.1 mouse_genomes_project 11 53736832 53737768 + MGP_NODShiLtJ_P0028558 Olfr1390 protein_coding protein_coding MGP_NODShiLtJ_T0017022.1 MGP_NODShiLtJ_G0015018.1 mouse_genomes_project 11 387304 393582 + Gm11946 processed_transcript processed_transcript MGP_NODShiLtJ_T0017023.1 MGP_NODShiLtJ_G0015018.1 mouse_genomes_project 11 388095 394004 + Gm11946 processed_transcript processed_transcript MGP_NODShiLtJ_T0031954.1 MGP_NODShiLtJ_G0018922.1 mouse_genomes_project 11 108538059 108545461 - MGP_NODShiLtJ_P0031954 Nr1d1 protein_coding protein_coding MGP_NODShiLtJ_T0031955.1 MGP_NODShiLtJ_G0018922.1 mouse_genomes_project 11 108539474 108540554 - Nr1d1 protein_coding processed_transcript MGP_NODShiLtJ_T0030327.1 MGP_NODShiLtJ_G0018508.1 mouse_genomes_project 11 80107547 80130714 - MGP_NODShiLtJ_P0030327 Aspa protein_coding protein_coding MGP_NODShiLtJ_T0030328.1 MGP_NODShiLtJ_G0018508.1 mouse_genomes_project 11 80107547 80135636 - MGP_NODShiLtJ_P0030328 Aspa protein_coding protein_coding MGP_NODShiLtJ_T0030329.1 MGP_NODShiLtJ_G0018508.1 mouse_genomes_project 11 80116108 80132539 - MGP_NODShiLtJ_P0030329 Aspa protein_coding protein_coding MGP_NODShiLtJ_T0030330.1 MGP_NODShiLtJ_G0018508.1 mouse_genomes_project 11 80122094 80130417 - Aspa protein_coding retained_intron MGP_NODShiLtJ_T0030331.1 MGP_NODShiLtJ_G0018508.1 mouse_genomes_project 11 80125926 80132869 - MGP_NODShiLtJ_P0030331 Aspa protein_coding protein_coding MGP_NODShiLtJ_T0030332.1 MGP_NODShiLtJ_G0018508.1 mouse_genomes_project 11 80128311 80130694 - MGP_NODShiLtJ_P0030332 Aspa protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028804.1 MGP_NODShiLtJ_G0018146.1 mouse_genomes_project 11 58336652 58347197 + MGP_NODShiLtJ_P0028804 Shroom1 protein_coding protein_coding MGP_NODShiLtJ_T0028805.1 MGP_NODShiLtJ_G0018146.1 mouse_genomes_project 11 58336677 58346729 + MGP_NODShiLtJ_P0028805 Shroom1 protein_coding protein_coding MGP_NODShiLtJ_T0028806.1 MGP_NODShiLtJ_G0018146.1 mouse_genomes_project 11 58336693 58347186 + Shroom1 protein_coding retained_intron MGP_NODShiLtJ_T0028807.1 MGP_NODShiLtJ_G0018146.1 mouse_genomes_project 11 58336696 58346932 + Shroom1 protein_coding retained_intron MGP_NODShiLtJ_T0028808.1 MGP_NODShiLtJ_G0018146.1 mouse_genomes_project 11 58336726 58346733 + MGP_NODShiLtJ_P0028808 Shroom1 protein_coding protein_coding MGP_NODShiLtJ_T0028809.1 MGP_NODShiLtJ_G0018146.1 mouse_genomes_project 11 58344926 58345284 + Shroom1 protein_coding processed_transcript MGP_NODShiLtJ_T0098664.1 MGP_NODShiLtJ_G0037058.1 mouse_genomes_project 11 5296588 5296650 - Gm27393 snRNA snRNA MGP_NODShiLtJ_T0006132.1 MGP_NODShiLtJ_G0005119.1 mouse_genomes_project 11 24728888 24826963 + 4933430M04Rik lincRNA lincRNA MGP_NODShiLtJ_T0097748.1 MGP_NODShiLtJ_G0036160.1 mouse_genomes_project 11 124892640 124896680 + pseudogene pseudogene MGP_NODShiLtJ_T0031973.1 MGP_NODShiLtJ_G0018927.1 mouse_genomes_project 11 108687290 108708448 + MGP_NODShiLtJ_P0031973 Cdc6 protein_coding protein_coding MGP_NODShiLtJ_T0031974.1 MGP_NODShiLtJ_G0018927.1 mouse_genomes_project 11 108687338 108708452 + MGP_NODShiLtJ_P0031974 Cdc6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031975.1 MGP_NODShiLtJ_G0018927.1 mouse_genomes_project 11 108687640 108703280 + MGP_NODShiLtJ_P0031975 Cdc6 protein_coding protein_coding MGP_NODShiLtJ_T0031976.1 MGP_NODShiLtJ_G0018927.1 mouse_genomes_project 11 108701853 108702848 + Cdc6 protein_coding retained_intron MGP_NODShiLtJ_T0003140.1 MGP_NODShiLtJ_G0002910.1 mouse_genomes_project 11 68266531 68290215 + Gm12278 antisense antisense MGP_NODShiLtJ_T0003064.1 MGP_NODShiLtJ_G0002846.1 mouse_genomes_project 11 2583109 2590987 + Gm11963 antisense antisense MGP_NODShiLtJ_T0006143.1 MGP_NODShiLtJ_G0005126.1 mouse_genomes_project 11 30970503 30972369 + Gm12088 lincRNA lincRNA MGP_NODShiLtJ_T0030782.1 MGP_NODShiLtJ_G0018623.1 mouse_genomes_project 11 85776894 85782721 + MGP_NODShiLtJ_P0030782 Aldoc protein_coding protein_coding MGP_NODShiLtJ_T0030783.1 MGP_NODShiLtJ_G0018623.1 mouse_genomes_project 11 85777094 85778722 + Aldoc protein_coding retained_intron MGP_NODShiLtJ_T0030784.1 MGP_NODShiLtJ_G0018623.1 mouse_genomes_project 11 85778224 85780785 + MGP_NODShiLtJ_P0030784 Aldoc protein_coding protein_coding MGP_NODShiLtJ_T0030785.1 MGP_NODShiLtJ_G0018623.1 mouse_genomes_project 11 85778350 85780143 + Aldoc protein_coding processed_transcript MGP_NODShiLtJ_T0030786.1 MGP_NODShiLtJ_G0018623.1 mouse_genomes_project 11 85779089 85779586 + Aldoc protein_coding processed_transcript MGP_NODShiLtJ_T0030787.1 MGP_NODShiLtJ_G0018623.1 mouse_genomes_project 11 85779353 85780733 + Aldoc protein_coding processed_transcript MGP_NODShiLtJ_T0028617.1 MGP_NODShiLtJ_G0018098.1 mouse_genomes_project 11 54775231 54812934 - MGP_NODShiLtJ_P0028617 Maml1 protein_coding protein_coding MGP_NODShiLtJ_T0028618.1 MGP_NODShiLtJ_G0018098.1 mouse_genomes_project 11 54775232 54812427 - MGP_NODShiLtJ_P0028618 Maml1 protein_coding protein_coding MGP_NODShiLtJ_T0012421.1 MGP_NODShiLtJ_G0010529.1 mouse_genomes_project 11 30692309 30692567 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009605.1 MGP_NODShiLtJ_G0007738.1 mouse_genomes_project 11 76042348 76042468 - Mir467f miRNA miRNA MGP_NODShiLtJ_T0029247.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66417177 66442659 - MGP_NODShiLtJ_P0029247 Shmt1 protein_coding protein_coding MGP_NODShiLtJ_T0029248.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66418087 66430789 - Shmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0029249.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66418327 66438407 - MGP_NODShiLtJ_P0029249 Shmt1 protein_coding protein_coding MGP_NODShiLtJ_T0029250.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66418327 66438407 - MGP_NODShiLtJ_P0029250 Shmt1 protein_coding protein_coding MGP_NODShiLtJ_T0029251.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66418327 66438407 - MGP_NODShiLtJ_P0029251 Shmt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029252.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66418431 66426403 - Shmt1 protein_coding retained_intron MGP_NODShiLtJ_T0029253.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66418779 66422161 - Shmt1 protein_coding retained_intron MGP_NODShiLtJ_T0029254.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66421936 66429239 - Shmt1 protein_coding retained_intron MGP_NODShiLtJ_T0029255.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66428630 66442485 - Shmt1 protein_coding retained_intron MGP_NODShiLtJ_T0029256.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66430037 66434058 - Shmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0029257.1 MGP_NODShiLtJ_G0018277.1 mouse_genomes_project 11 66435733 66444032 - Shmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0006239.1 MGP_NODShiLtJ_G0005204.1 mouse_genomes_project 11 96012494 96014187 + Mir142hg lincRNA lincRNA MGP_NODShiLtJ_T0031645.1 MGP_NODShiLtJ_G0018849.1 mouse_genomes_project 11 105655338 105690687 + MGP_NODShiLtJ_P0031645 Ttll6 protein_coding protein_coding MGP_NODShiLtJ_T0031646.1 MGP_NODShiLtJ_G0018849.1 mouse_genomes_project 11 105655338 105690682 + MGP_NODShiLtJ_P0031646 Ttll6 protein_coding protein_coding MGP_NODShiLtJ_T0017163.1 MGP_NODShiLtJ_G0015093.1 mouse_genomes_project 11 131605140 131629846 + Gm11762 processed_transcript processed_transcript MGP_NODShiLtJ_T0028647.1 MGP_NODShiLtJ_G0018103.1 mouse_genomes_project 11 55141396 55353301 + MGP_NODShiLtJ_P0028647 Adamts2 protein_coding protein_coding MGP_NODShiLtJ_T0028648.1 MGP_NODShiLtJ_G0018103.1 mouse_genomes_project 11 55142118 55344176 + MGP_NODShiLtJ_P0028648 Adamts2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028649.1 MGP_NODShiLtJ_G0018103.1 mouse_genomes_project 11 55321880 55322717 + Adamts2 protein_coding processed_transcript MGP_NODShiLtJ_T0028650.1 MGP_NODShiLtJ_G0018103.1 mouse_genomes_project 11 55327428 55328457 + Adamts2 protein_coding processed_transcript MGP_NODShiLtJ_T0028651.1 MGP_NODShiLtJ_G0018103.1 mouse_genomes_project 11 55341253 55344183 + Adamts2 protein_coding processed_transcript MGP_NODShiLtJ_T0032250.1 MGP_NODShiLtJ_G0019036.1 mouse_genomes_project 11 111221686 111228307 + MGP_NODShiLtJ_P0032250 Tubg2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0032251.1 MGP_NODShiLtJ_G0019036.1 mouse_genomes_project 11 111221710 111228306 + MGP_NODShiLtJ_P0032251 Tubg2 protein_coding protein_coding MGP_NODShiLtJ_T0029847.1 MGP_NODShiLtJ_G0018410.1 mouse_genomes_project 11 76305534 76313205 - MGP_NODShiLtJ_P0029847 Tnk1 protein_coding protein_coding MGP_NODShiLtJ_T0029848.1 MGP_NODShiLtJ_G0018410.1 mouse_genomes_project 11 76305748 76311567 - MGP_NODShiLtJ_P0029848 Tnk1 protein_coding protein_coding MGP_NODShiLtJ_T0029849.1 MGP_NODShiLtJ_G0018410.1 mouse_genomes_project 11 76306604 76310080 - MGP_NODShiLtJ_P0029849 Tnk1 protein_coding protein_coding MGP_NODShiLtJ_T0029850.1 MGP_NODShiLtJ_G0018410.1 mouse_genomes_project 11 76309011 76313205 - MGP_NODShiLtJ_P0029850 Tnk1 protein_coding protein_coding MGP_NODShiLtJ_T0029851.1 MGP_NODShiLtJ_G0018410.1 mouse_genomes_project 11 76310058 76313183 - MGP_NODShiLtJ_P0029851 Tnk1 protein_coding protein_coding MGP_NODShiLtJ_T0028331.1 MGP_NODShiLtJ_G0018016.1 mouse_genomes_project 11 43731372 43744626 - MGP_NODShiLtJ_P0028331 Mat2b protein_coding protein_coding MGP_NODShiLtJ_T0028332.1 MGP_NODShiLtJ_G0018016.1 mouse_genomes_project 11 43731372 43747001 - MGP_NODShiLtJ_P0028332 Mat2b protein_coding protein_coding MGP_NODShiLtJ_T0028333.1 MGP_NODShiLtJ_G0018016.1 mouse_genomes_project 11 43732714 43744473 - MGP_NODShiLtJ_P0028333 Mat2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028334.1 MGP_NODShiLtJ_G0018016.1 mouse_genomes_project 11 43732768 43737145 - Mat2b protein_coding retained_intron MGP_NODShiLtJ_T0028335.1 MGP_NODShiLtJ_G0018016.1 mouse_genomes_project 11 43736752 43737735 - Mat2b protein_coding retained_intron MGP_NODShiLtJ_T0028336.1 MGP_NODShiLtJ_G0018016.1 mouse_genomes_project 11 43737403 43744480 - Mat2b protein_coding retained_intron MGP_NODShiLtJ_T0028337.1 MGP_NODShiLtJ_G0018016.1 mouse_genomes_project 11 43739254 43746785 - Mat2b protein_coding retained_intron MGP_NODShiLtJ_T0031794.1 MGP_NODShiLtJ_G0018886.1 mouse_genomes_project 11 107338410 107350350 - MGP_NODShiLtJ_P0031794 Pcgf2 protein_coding protein_coding MGP_NODShiLtJ_T0031795.1 MGP_NODShiLtJ_G0018886.1 mouse_genomes_project 11 107338410 107350148 - MGP_NODShiLtJ_P0031795 Pcgf2 protein_coding protein_coding MGP_NODShiLtJ_T0031796.1 MGP_NODShiLtJ_G0018886.1 mouse_genomes_project 11 107340575 107352377 - MGP_NODShiLtJ_P0031796 Pcgf2 protein_coding protein_coding MGP_NODShiLtJ_T0031797.1 MGP_NODShiLtJ_G0018886.1 mouse_genomes_project 11 107340575 107350350 - MGP_NODShiLtJ_P0031797 Pcgf2 protein_coding protein_coding MGP_NODShiLtJ_T0031798.1 MGP_NODShiLtJ_G0018886.1 mouse_genomes_project 11 107340742 107343536 - MGP_NODShiLtJ_P0031798 Pcgf2 protein_coding protein_coding MGP_NODShiLtJ_T0031799.1 MGP_NODShiLtJ_G0018886.1 mouse_genomes_project 11 107341283 107343173 - Pcgf2 protein_coding processed_transcript MGP_NODShiLtJ_T0031800.1 MGP_NODShiLtJ_G0018886.1 mouse_genomes_project 11 107347959 107350345 - Pcgf2 protein_coding processed_transcript MGP_NODShiLtJ_T0028269.1 MGP_NODShiLtJ_G0017997.1 mouse_genomes_project 11 34958829 34970694 - MGP_NODShiLtJ_P0028269 Npm1 protein_coding protein_coding MGP_NODShiLtJ_T0028270.1 MGP_NODShiLtJ_G0017997.1 mouse_genomes_project 11 34959055 34970560 - MGP_NODShiLtJ_P0028270 Npm1 protein_coding protein_coding MGP_NODShiLtJ_T0028271.1 MGP_NODShiLtJ_G0017997.1 mouse_genomes_project 11 34959056 34961963 - Npm1 protein_coding processed_transcript MGP_NODShiLtJ_T0028272.1 MGP_NODShiLtJ_G0017997.1 mouse_genomes_project 11 34962424 34970565 - MGP_NODShiLtJ_P0028272 Npm1 protein_coding protein_coding MGP_NODShiLtJ_T0028273.1 MGP_NODShiLtJ_G0017997.1 mouse_genomes_project 11 34963523 34964761 - Npm1 protein_coding processed_transcript MGP_NODShiLtJ_T0033298.1 MGP_NODShiLtJ_G0019257.1 mouse_genomes_project 11 127530058 127544420 - MGP_NODShiLtJ_P0033298 Caskin2 protein_coding protein_coding MGP_NODShiLtJ_T0033299.1 MGP_NODShiLtJ_G0019257.1 mouse_genomes_project 11 127530875 127531757 - Caskin2 protein_coding processed_transcript MGP_NODShiLtJ_T0033300.1 MGP_NODShiLtJ_G0019257.1 mouse_genomes_project 11 127535610 127538898 - MGP_NODShiLtJ_P0033300 Caskin2 protein_coding protein_coding MGP_NODShiLtJ_T0033301.1 MGP_NODShiLtJ_G0019257.1 mouse_genomes_project 11 127537572 127544429 - MGP_NODShiLtJ_P0033301 Caskin2 protein_coding protein_coding MGP_NODShiLtJ_T0009603.1 MGP_NODShiLtJ_G0007736.1 mouse_genomes_project 11 75340574 75340679 - Mir3062 miRNA miRNA MGP_NODShiLtJ_T0009687.1 MGP_NODShiLtJ_G0007820.1 mouse_genomes_project 11 133594583 133594643 - Mir7236 miRNA miRNA MGP_NODShiLtJ_T0012551.1 MGP_NODShiLtJ_G0010659.1 mouse_genomes_project 11 82572808 82573208 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029049.1 MGP_NODShiLtJ_G0018220.1 mouse_genomes_project 11 64042294 64056724 + MGP_NODShiLtJ_P0029049 protein_coding protein_coding MGP_NODShiLtJ_T0029843.1 MGP_NODShiLtJ_G0018409.1 mouse_genomes_project 11 76300905 76305566 + MGP_NODShiLtJ_P0029843 Plscr3 protein_coding protein_coding MGP_NODShiLtJ_T0029844.1 MGP_NODShiLtJ_G0018409.1 mouse_genomes_project 11 76301146 76306588 + MGP_NODShiLtJ_P0029844 Plscr3 protein_coding protein_coding MGP_NODShiLtJ_T0029845.1 MGP_NODShiLtJ_G0018409.1 mouse_genomes_project 11 76301146 76302905 + MGP_NODShiLtJ_P0029845 Plscr3 protein_coding protein_coding MGP_NODShiLtJ_T0029846.1 MGP_NODShiLtJ_G0018409.1 mouse_genomes_project 11 76301205 76305573 + MGP_NODShiLtJ_P0029846 Plscr3 protein_coding protein_coding MGP_NODShiLtJ_T0099903.1 MGP_NODShiLtJ_G0038297.1 mouse_genomes_project 11 5434401 5434476 - Gm24051 snoRNA snoRNA MGP_NODShiLtJ_T0006128.1 MGP_NODShiLtJ_G0005115.1 mouse_genomes_project 11 24284560 24285369 + Gm12063 lincRNA lincRNA MGP_NODShiLtJ_T0028531.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53554133 53569288 + MGP_NODShiLtJ_P0028531 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028532.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53554137 53566015 + MGP_NODShiLtJ_P0028532 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028533.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53554326 53564371 + Zfp62 protein_coding processed_transcript MGP_NODShiLtJ_T0028534.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53554326 53565645 + Zfp62 protein_coding retained_intron MGP_NODShiLtJ_T0028535.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53554326 53565846 + MGP_NODShiLtJ_P0028535 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028536.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53554339 53569551 + MGP_NODShiLtJ_P0028536 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028537.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53554347 53566405 + MGP_NODShiLtJ_P0028537 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028538.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53554575 53565912 + MGP_NODShiLtJ_P0028538 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028539.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53555160 53568498 + MGP_NODShiLtJ_P0028539 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028540.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53563422 53569544 + MGP_NODShiLtJ_P0028540 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028541.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53564326 53566058 + MGP_NODShiLtJ_P0028541 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0028542.1 MGP_NODShiLtJ_G0018075.1 mouse_genomes_project 11 53565283 53569544 + MGP_NODShiLtJ_P0028542 Zfp62 protein_coding protein_coding MGP_NODShiLtJ_T0034069.1 MGP_NODShiLtJ_G0019408.1 mouse_genomes_project 11 133828720 133899420 - MGP_NODShiLtJ_P0034069 B3gntl1 protein_coding protein_coding MGP_NODShiLtJ_T0034070.1 MGP_NODShiLtJ_G0019408.1 mouse_genomes_project 11 133839791 133899420 - MGP_NODShiLtJ_P0034070 B3gntl1 protein_coding protein_coding MGP_NODShiLtJ_T0009654.1 MGP_NODShiLtJ_G0007787.1 mouse_genomes_project 11 107989874 107989931 + Mir5119 miRNA miRNA MGP_NODShiLtJ_T0033119.1 MGP_NODShiLtJ_G0019217.1 mouse_genomes_project 11 126414766 126429486 + MGP_NODShiLtJ_P0033119 Gprc5c protein_coding protein_coding MGP_NODShiLtJ_T0033120.1 MGP_NODShiLtJ_G0019217.1 mouse_genomes_project 11 126414912 126436108 + MGP_NODShiLtJ_P0033120 Gprc5c protein_coding protein_coding MGP_NODShiLtJ_T0033121.1 MGP_NODShiLtJ_G0019217.1 mouse_genomes_project 11 126415154 126434850 + MGP_NODShiLtJ_P0033121 Gprc5c protein_coding protein_coding MGP_NODShiLtJ_T0033122.1 MGP_NODShiLtJ_G0019217.1 mouse_genomes_project 11 126415464 126434851 + MGP_NODShiLtJ_P0033122 Gprc5c protein_coding protein_coding MGP_NODShiLtJ_T0033123.1 MGP_NODShiLtJ_G0019217.1 mouse_genomes_project 11 126415494 126430100 + MGP_NODShiLtJ_P0033123 Gprc5c protein_coding protein_coding MGP_NODShiLtJ_T0033124.1 MGP_NODShiLtJ_G0019217.1 mouse_genomes_project 11 126415933 126429650 + MGP_NODShiLtJ_P0033124 Gprc5c protein_coding protein_coding MGP_NODShiLtJ_T0033125.1 MGP_NODShiLtJ_G0019217.1 mouse_genomes_project 11 126430244 126436362 + MGP_NODShiLtJ_P0033125 Gprc5c protein_coding protein_coding MGP_NODShiLtJ_T0003079.1 MGP_NODShiLtJ_G0002856.1 mouse_genomes_project 11 18421211 18423269 + Gm16140 antisense antisense MGP_NODShiLtJ_T0003080.1 MGP_NODShiLtJ_G0002856.1 mouse_genomes_project 11 18421213 18422876 + Gm16140 antisense antisense MGP_NODShiLtJ_T0032846.1 MGP_NODShiLtJ_G0019160.1 mouse_genomes_project 11 117001784 117007715 - MGP_NODShiLtJ_P0032846 Icam2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0032847.1 MGP_NODShiLtJ_G0019160.1 mouse_genomes_project 11 117002697 117005563 - MGP_NODShiLtJ_P0032847 Icam2 protein_coding protein_coding MGP_NODShiLtJ_T0032848.1 MGP_NODShiLtJ_G0019160.1 mouse_genomes_project 11 117002943 117012823 - MGP_NODShiLtJ_P0032848 Icam2 protein_coding protein_coding MGP_NODShiLtJ_T0032849.1 MGP_NODShiLtJ_G0019160.1 mouse_genomes_project 11 117005449 117012826 - MGP_NODShiLtJ_P0032849 Icam2 protein_coding protein_coding MGP_NODShiLtJ_T0032850.1 MGP_NODShiLtJ_G0019160.1 mouse_genomes_project 11 117005806 117007758 - Icam2 protein_coding retained_intron MGP_NODShiLtJ_T0098701.1 MGP_NODShiLtJ_G0037095.1 mouse_genomes_project 11 87101465 87101569 + Gm23293 snRNA snRNA MGP_NODShiLtJ_T0012437.1 MGP_NODShiLtJ_G0010545.1 mouse_genomes_project 11 34642284 34642864 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003071.1 MGP_NODShiLtJ_G0002851.1 mouse_genomes_project 11 9684561 9685868 - Gm12000 antisense antisense MGP_NODShiLtJ_T0028466.1 MGP_NODShiLtJ_G0018050.1 mouse_genomes_project 11 50427086 50457396 + MGP_NODShiLtJ_P0028466 Havcr2 protein_coding protein_coding MGP_NODShiLtJ_T0028467.1 MGP_NODShiLtJ_G0018050.1 mouse_genomes_project 11 50427120 50457387 + MGP_NODShiLtJ_P0028467 Havcr2 protein_coding protein_coding MGP_NODShiLtJ_T0031956.1 MGP_NODShiLtJ_G0018923.1 mouse_genomes_project 11 108565991 108578317 + MGP_NODShiLtJ_P0031956 Msl1 protein_coding protein_coding MGP_NODShiLtJ_T0031957.1 MGP_NODShiLtJ_G0018923.1 mouse_genomes_project 11 108566266 108571528 + MGP_NODShiLtJ_P0031957 Msl1 protein_coding protein_coding MGP_NODShiLtJ_T0031958.1 MGP_NODShiLtJ_G0018923.1 mouse_genomes_project 11 108566275 108576910 + MGP_NODShiLtJ_P0031958 Msl1 protein_coding protein_coding MGP_NODShiLtJ_T0031959.1 MGP_NODShiLtJ_G0018923.1 mouse_genomes_project 11 108569129 108576083 + MGP_NODShiLtJ_P0031959 Msl1 protein_coding protein_coding MGP_NODShiLtJ_T0031960.1 MGP_NODShiLtJ_G0018923.1 mouse_genomes_project 11 108570640 108574595 + MGP_NODShiLtJ_P0031960 Msl1 protein_coding protein_coding MGP_NODShiLtJ_T0031961.1 MGP_NODShiLtJ_G0018923.1 mouse_genomes_project 11 108574746 108576255 + Msl1 protein_coding processed_transcript MGP_NODShiLtJ_T0009635.1 MGP_NODShiLtJ_G0007768.1 mouse_genomes_project 11 93855956 93856043 - Mir5110 miRNA miRNA MGP_NODShiLtJ_T0012495.1 MGP_NODShiLtJ_G0010603.1 mouse_genomes_project 11 60636235 60636705 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033950.1 MGP_NODShiLtJ_G0019380.1 mouse_genomes_project 11 132857929 132865133 + MGP_NODShiLtJ_P0033950 Lrrc45 protein_coding protein_coding MGP_NODShiLtJ_T0033951.1 MGP_NODShiLtJ_G0019380.1 mouse_genomes_project 11 132857955 132865128 + MGP_NODShiLtJ_P0033951 Lrrc45 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033952.1 MGP_NODShiLtJ_G0019380.1 mouse_genomes_project 11 132857982 132859559 + MGP_NODShiLtJ_P0033952 Lrrc45 protein_coding protein_coding MGP_NODShiLtJ_T0033953.1 MGP_NODShiLtJ_G0019380.1 mouse_genomes_project 11 132861519 132863977 + Lrrc45 protein_coding retained_intron MGP_NODShiLtJ_T0033954.1 MGP_NODShiLtJ_G0019380.1 mouse_genomes_project 11 132863735 132864917 + Lrrc45 protein_coding retained_intron MGP_NODShiLtJ_T0032073.1 MGP_NODShiLtJ_G0018992.1 mouse_genomes_project 11 110066001 110071370 - MGP_NODShiLtJ_P0032073 Krt35 protein_coding protein_coding MGP_NODShiLtJ_T0032074.1 MGP_NODShiLtJ_G0018992.1 mouse_genomes_project 11 110066003 110071386 - Krt35 protein_coding retained_intron MGP_NODShiLtJ_T0030175.1 MGP_NODShiLtJ_G0018469.1 mouse_genomes_project 11 77589476 77611386 - MGP_NODShiLtJ_P0030175 Dhx33 protein_coding protein_coding MGP_NODShiLtJ_T0030176.1 MGP_NODShiLtJ_G0018469.1 mouse_genomes_project 11 77591896 77599375 - MGP_NODShiLtJ_P0030176 Dhx33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030177.1 MGP_NODShiLtJ_G0018469.1 mouse_genomes_project 11 77592137 77611369 - MGP_NODShiLtJ_P0030177 Dhx33 protein_coding protein_coding MGP_NODShiLtJ_T0030178.1 MGP_NODShiLtJ_G0018469.1 mouse_genomes_project 11 77592137 77611289 - MGP_NODShiLtJ_P0030178 Dhx33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030179.1 MGP_NODShiLtJ_G0018469.1 mouse_genomes_project 11 77597109 77600583 - Dhx33 protein_coding retained_intron MGP_NODShiLtJ_T0030180.1 MGP_NODShiLtJ_G0018469.1 mouse_genomes_project 11 77597519 77601388 - MGP_NODShiLtJ_P0030180 Dhx33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030181.1 MGP_NODShiLtJ_G0018469.1 mouse_genomes_project 11 77598504 77599412 - Dhx33 protein_coding retained_intron MGP_NODShiLtJ_T0030182.1 MGP_NODShiLtJ_G0018469.1 mouse_genomes_project 11 77604526 77611386 - Dhx33 protein_coding retained_intron MGP_NODShiLtJ_T0003161.1 MGP_NODShiLtJ_G0002927.1 mouse_genomes_project 11 73809038 73814882 - Gm12301 antisense antisense MGP_NODShiLtJ_T0098693.1 MGP_NODShiLtJ_G0037087.1 mouse_genomes_project 11 77601933 77602039 - Gm22297 snRNA snRNA MGP_NODShiLtJ_T0033383.1 MGP_NODShiLtJ_G0019271.1 mouse_genomes_project 11 127856557 127858924 - Trim47 protein_coding processed_transcript MGP_NODShiLtJ_T0033384.1 MGP_NODShiLtJ_G0019271.1 mouse_genomes_project 11 127856557 127861030 - MGP_NODShiLtJ_P0033384 Trim47 protein_coding protein_coding MGP_NODShiLtJ_T0033385.1 MGP_NODShiLtJ_G0019271.1 mouse_genomes_project 11 127856557 127861039 - MGP_NODShiLtJ_P0033385 Trim47 protein_coding protein_coding MGP_NODShiLtJ_T0033386.1 MGP_NODShiLtJ_G0019271.1 mouse_genomes_project 11 127857014 127857889 - Trim47 protein_coding processed_transcript MGP_NODShiLtJ_T0033387.1 MGP_NODShiLtJ_G0019271.1 mouse_genomes_project 11 127857144 127858545 - Trim47 protein_coding processed_transcript MGP_NODShiLtJ_T0033388.1 MGP_NODShiLtJ_G0019271.1 mouse_genomes_project 11 127857197 127858840 - Trim47 protein_coding processed_transcript MGP_NODShiLtJ_T0033389.1 MGP_NODShiLtJ_G0019271.1 mouse_genomes_project 11 127858615 127879920 - Trim47 protein_coding processed_transcript MGP_NODShiLtJ_T0006166.1 MGP_NODShiLtJ_G0005147.1 mouse_genomes_project 11 49043469 49096294 + Gm12160 lincRNA lincRNA MGP_NODShiLtJ_T0030226.1 MGP_NODShiLtJ_G0018480.1 mouse_genomes_project 11 78924134 78926603 + MGP_NODShiLtJ_P0030226 Txndc17 protein_coding protein_coding MGP_NODShiLtJ_T0030227.1 MGP_NODShiLtJ_G0018480.1 mouse_genomes_project 11 78924202 78925265 + Txndc17 protein_coding retained_intron MGP_NODShiLtJ_T0032065.1 MGP_NODShiLtJ_G0018985.1 mouse_genomes_project 11 109944665 109946553 - MGP_NODShiLtJ_P0032065 Krtap16-1 protein_coding protein_coding MGP_NODShiLtJ_T0099908.1 MGP_NODShiLtJ_G0038302.1 mouse_genomes_project 11 20515735 20515864 - Gm22807 snoRNA snoRNA MGP_NODShiLtJ_T0031438.1 MGP_NODShiLtJ_G0018798.1 mouse_genomes_project 11 103145812 103162609 - MGP_NODShiLtJ_P0031438 Nme1 protein_coding protein_coding MGP_NODShiLtJ_T0031439.1 MGP_NODShiLtJ_G0018798.1 mouse_genomes_project 11 103148311 103157030 - MGP_NODShiLtJ_P0031439 Nme1 protein_coding protein_coding MGP_NODShiLtJ_T0031440.1 MGP_NODShiLtJ_G0018798.1 mouse_genomes_project 11 103149588 103160700 - MGP_NODShiLtJ_P0031440 Nme1 protein_coding protein_coding MGP_NODShiLtJ_T0003148.1 MGP_NODShiLtJ_G0002917.1 mouse_genomes_project 11 68574217 68580156 + Zfp286os antisense antisense MGP_NODShiLtJ_T0003098.1 MGP_NODShiLtJ_G0002873.1 mouse_genomes_project 11 48519777 48522913 - Gm12158 antisense antisense MGP_NODShiLtJ_T0027839.1 MGP_NODShiLtJ_G0017899.1 mouse_genomes_project 11 8989826 9142895 + MGP_NODShiLtJ_P0027839 Vwc2 protein_coding protein_coding MGP_NODShiLtJ_T0027840.1 MGP_NODShiLtJ_G0017899.1 mouse_genomes_project 11 8990347 9148302 + MGP_NODShiLtJ_P0027840 Vwc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027841.1 MGP_NODShiLtJ_G0017899.1 mouse_genomes_project 11 8991454 9146009 + MGP_NODShiLtJ_P0027841 Vwc2 protein_coding protein_coding MGP_NODShiLtJ_T0027842.1 MGP_NODShiLtJ_G0017899.1 mouse_genomes_project 11 8992088 9005197 + Vwc2 protein_coding processed_transcript MGP_NODShiLtJ_T0006215.1 MGP_NODShiLtJ_G0005188.1 mouse_genomes_project 11 82921420 82937177 - Gm26836 lincRNA lincRNA MGP_NODShiLtJ_T0028253.1 MGP_NODShiLtJ_G0017990.1 mouse_genomes_project 11 34056690 34143170 + MGP_NODShiLtJ_P0028253 Sh3pxd2b protein_coding protein_coding MGP_NODShiLtJ_T0028254.1 MGP_NODShiLtJ_G0017990.1 mouse_genomes_project 11 34056710 34100150 + Sh3pxd2b protein_coding retained_intron MGP_NODShiLtJ_T0006155.1 MGP_NODShiLtJ_G0005136.1 mouse_genomes_project 11 36700065 36702284 + Gm12711 lincRNA lincRNA MGP_NODShiLtJ_T0033347.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127717430 127753732 + MGP_NODShiLtJ_P0033347 Itgb4 protein_coding protein_coding MGP_NODShiLtJ_T0033348.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127717446 127753731 + MGP_NODShiLtJ_P0033348 Itgb4 protein_coding protein_coding MGP_NODShiLtJ_T0033349.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127717446 127753731 + MGP_NODShiLtJ_P0033349 Itgb4 protein_coding protein_coding MGP_NODShiLtJ_T0033350.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127717564 127739861 + Itgb4 protein_coding processed_transcript MGP_NODShiLtJ_T0033351.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127717700 127753732 + MGP_NODShiLtJ_P0033351 Itgb4 protein_coding protein_coding MGP_NODShiLtJ_T0033352.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127720507 127753732 + MGP_NODShiLtJ_P0033352 Itgb4 protein_coding protein_coding MGP_NODShiLtJ_T0033353.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127720507 127753732 + MGP_NODShiLtJ_P0033353 Itgb4 protein_coding protein_coding MGP_NODShiLtJ_T0033354.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127733769 127734869 + Itgb4 protein_coding processed_transcript MGP_NODShiLtJ_T0033355.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127734770 127735792 + Itgb4 protein_coding processed_transcript MGP_NODShiLtJ_T0033356.1 MGP_NODShiLtJ_G0019265.1 mouse_genomes_project 11 127738032 127739431 + Itgb4 protein_coding processed_transcript MGP_NODShiLtJ_T0032311.1 MGP_NODShiLtJ_G0019047.1 mouse_genomes_project 11 111411625 111415421 + MGP_NODShiLtJ_P0032311 Psme3 protein_coding protein_coding MGP_NODShiLtJ_T0032312.1 MGP_NODShiLtJ_G0019047.1 mouse_genomes_project 11 111411625 111420749 + MGP_NODShiLtJ_P0032312 Psme3 protein_coding protein_coding MGP_NODShiLtJ_T0032313.1 MGP_NODShiLtJ_G0019047.1 mouse_genomes_project 11 111412389 111416007 + MGP_NODShiLtJ_P0032313 Psme3 protein_coding protein_coding MGP_NODShiLtJ_T0032314.1 MGP_NODShiLtJ_G0019047.1 mouse_genomes_project 11 111412435 111415437 + Psme3 protein_coding processed_transcript MGP_NODShiLtJ_T0032315.1 MGP_NODShiLtJ_G0019047.1 mouse_genomes_project 11 111415246 111419311 + Psme3 protein_coding processed_transcript MGP_NODShiLtJ_T0003106.1 MGP_NODShiLtJ_G0002881.1 mouse_genomes_project 11 56708823 56709882 + Gm12204 antisense antisense MGP_NODShiLtJ_T0031441.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103192878 103250563 + Spag9 protein_coding processed_transcript MGP_NODShiLtJ_T0031442.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103192890 103257589 + Spag9 protein_coding processed_transcript MGP_NODShiLtJ_T0031443.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103192890 103340648 + MGP_NODShiLtJ_P0031443 Spag9 protein_coding protein_coding MGP_NODShiLtJ_T0031444.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103250504 103307741 + MGP_NODShiLtJ_P0031444 Spag9 protein_coding protein_coding MGP_NODShiLtJ_T0031445.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103251052 103318204 + MGP_NODShiLtJ_P0031445 Spag9 protein_coding protein_coding MGP_NODShiLtJ_T0031446.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103251124 103267285 + Spag9 protein_coding processed_transcript MGP_NODShiLtJ_T0031447.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103251139 103340643 + MGP_NODShiLtJ_P0031447 Spag9 protein_coding protein_coding MGP_NODShiLtJ_T0031448.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103251139 103340643 + MGP_NODShiLtJ_P0031448 Spag9 protein_coding protein_coding MGP_NODShiLtJ_T0031449.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103251202 103340648 + MGP_NODShiLtJ_P0031449 Spag9 protein_coding protein_coding MGP_NODShiLtJ_T0031450.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103251299 103340646 + MGP_NODShiLtJ_P0031450 Spag9 protein_coding protein_coding MGP_NODShiLtJ_T0031451.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103277613 103304276 + Spag9 protein_coding processed_transcript MGP_NODShiLtJ_T0031452.1 MGP_NODShiLtJ_G0018799.1 mouse_genomes_project 11 103291231 103340648 + MGP_NODShiLtJ_P0031452 Spag9 protein_coding protein_coding MGP_NODShiLtJ_T0027824.1 MGP_NODShiLtJ_G0017895.1 mouse_genomes_project 11 6515425 6540193 - MGP_NODShiLtJ_P0027824 Sun3 protein_coding protein_coding MGP_NODShiLtJ_T0027825.1 MGP_NODShiLtJ_G0017895.1 mouse_genomes_project 11 6515425 6551244 - MGP_NODShiLtJ_P0027825 Sun3 protein_coding protein_coding MGP_NODShiLtJ_T0006162.1 MGP_NODShiLtJ_G0005143.1 mouse_genomes_project 11 47762958 47948734 + Gm12153 lincRNA lincRNA MGP_NODShiLtJ_T0031229.1 MGP_NODShiLtJ_G0018743.1 mouse_genomes_project 11 94859729 94926683 - MGP_NODShiLtJ_P0031229 Cltc protein_coding protein_coding MGP_NODShiLtJ_T0031230.1 MGP_NODShiLtJ_G0018743.1 mouse_genomes_project 11 94860033 94926619 - MGP_NODShiLtJ_P0031230 Cltc protein_coding protein_coding MGP_NODShiLtJ_T0031231.1 MGP_NODShiLtJ_G0018743.1 mouse_genomes_project 11 94860695 94869843 - MGP_NODShiLtJ_P0031231 Cltc protein_coding protein_coding MGP_NODShiLtJ_T0031232.1 MGP_NODShiLtJ_G0018743.1 mouse_genomes_project 11 94867083 94868576 - Cltc protein_coding processed_transcript MGP_NODShiLtJ_T0031233.1 MGP_NODShiLtJ_G0018743.1 mouse_genomes_project 11 94889112 94893208 - Cltc protein_coding retained_intron MGP_NODShiLtJ_T0031234.1 MGP_NODShiLtJ_G0018743.1 mouse_genomes_project 11 94890032 94893177 - Cltc protein_coding processed_transcript MGP_NODShiLtJ_T0012409.1 MGP_NODShiLtJ_G0010517.1 mouse_genomes_project 11 26900333 26901789 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032022.1 MGP_NODShiLtJ_G0018944.1 mouse_genomes_project 11 109338298 109353408 - MGP_NODShiLtJ_P0032022 Krt23 protein_coding protein_coding MGP_NODShiLtJ_T0012559.1 MGP_NODShiLtJ_G0010667.1 mouse_genomes_project 11 85586708 85586951 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028986.1 MGP_NODShiLtJ_G0018192.1 mouse_genomes_project 11 63061039 63069659 + MGP_NODShiLtJ_P0028986 Sap30l protein_coding protein_coding MGP_NODShiLtJ_T0006204.1 MGP_NODShiLtJ_G0005180.1 mouse_genomes_project 11 78099243 78109771 - Gm16013 lincRNA lincRNA MGP_NODShiLtJ_T0032818.1 MGP_NODShiLtJ_G0019152.1 mouse_genomes_project 11 116871849 116878787 - MGP_NODShiLtJ_P0032818 Ftsj3 protein_coding protein_coding MGP_NODShiLtJ_T0032819.1 MGP_NODShiLtJ_G0019152.1 mouse_genomes_project 11 116872606 116873406 - Ftsj3 protein_coding retained_intron MGP_NODShiLtJ_T0032820.1 MGP_NODShiLtJ_G0019152.1 mouse_genomes_project 11 116873716 116875262 - Ftsj3 protein_coding retained_intron MGP_NODShiLtJ_T0032821.1 MGP_NODShiLtJ_G0019152.1 mouse_genomes_project 11 116876083 116876703 - Ftsj3 protein_coding retained_intron MGP_NODShiLtJ_T0032822.1 MGP_NODShiLtJ_G0019152.1 mouse_genomes_project 11 116876999 116878504 - Ftsj3 protein_coding retained_intron MGP_NODShiLtJ_T0032823.1 MGP_NODShiLtJ_G0019152.1 mouse_genomes_project 11 116877570 116878512 - Ftsj3 protein_coding retained_intron MGP_NODShiLtJ_T0030751.1 MGP_NODShiLtJ_G0018617.1 mouse_genomes_project 11 85630713 85645274 + MGP_NODShiLtJ_P0030751 Proca1 protein_coding protein_coding MGP_NODShiLtJ_T0030752.1 MGP_NODShiLtJ_G0018617.1 mouse_genomes_project 11 85632025 85645237 + MGP_NODShiLtJ_P0030752 Proca1 protein_coding protein_coding MGP_NODShiLtJ_T0030753.1 MGP_NODShiLtJ_G0018617.1 mouse_genomes_project 11 85632055 85645533 + MGP_NODShiLtJ_P0030753 Proca1 protein_coding protein_coding MGP_NODShiLtJ_T0030754.1 MGP_NODShiLtJ_G0018617.1 mouse_genomes_project 11 85644196 85644861 + Proca1 protein_coding processed_transcript MGP_NODShiLtJ_T0006308.1 MGP_NODShiLtJ_G0005253.1 mouse_genomes_project 11 129424439 129434169 + Gm11734 lincRNA lincRNA MGP_NODShiLtJ_T0031263.1 MGP_NODShiLtJ_G0018754.1 mouse_genomes_project 11 95811532 95814130 + MGP_NODShiLtJ_P0031263 Gm11492 protein_coding protein_coding MGP_NODShiLtJ_T0029579.1 MGP_NODShiLtJ_G0018349.1 mouse_genomes_project 11 74734391 74801411 + MGP_NODShiLtJ_P0029579 Pik3r5 protein_coding protein_coding MGP_NODShiLtJ_T0029580.1 MGP_NODShiLtJ_G0018349.1 mouse_genomes_project 11 74734395 74780290 + Pik3r5 protein_coding processed_transcript MGP_NODShiLtJ_T0029581.1 MGP_NODShiLtJ_G0018349.1 mouse_genomes_project 11 74734430 74742645 + Pik3r5 protein_coding processed_transcript MGP_NODShiLtJ_T0029582.1 MGP_NODShiLtJ_G0018349.1 mouse_genomes_project 11 74777320 74799759 + Pik3r5 protein_coding processed_transcript MGP_NODShiLtJ_T0029583.1 MGP_NODShiLtJ_G0018349.1 mouse_genomes_project 11 74779006 74796841 + Pik3r5 protein_coding processed_transcript MGP_NODShiLtJ_T0033482.1 MGP_NODShiLtJ_G0019288.1 mouse_genomes_project 11 128321004 128327283 - Ube2o protein_coding processed_transcript MGP_NODShiLtJ_T0033483.1 MGP_NODShiLtJ_G0019288.1 mouse_genomes_project 11 128321004 128364483 - MGP_NODShiLtJ_P0033483 Ube2o protein_coding protein_coding MGP_NODShiLtJ_T0033484.1 MGP_NODShiLtJ_G0019288.1 mouse_genomes_project 11 128328969 128332076 - Ube2o protein_coding processed_transcript MGP_NODShiLtJ_T0031725.1 MGP_NODShiLtJ_G0018869.1 mouse_genomes_project 11 106604694 106617206 + MGP_NODShiLtJ_P0031725 Sp6 protein_coding protein_coding MGP_NODShiLtJ_T0031726.1 MGP_NODShiLtJ_G0018869.1 mouse_genomes_project 11 106609944 106617203 + MGP_NODShiLtJ_P0031726 Sp6 protein_coding protein_coding MGP_NODShiLtJ_T0099969.1 MGP_NODShiLtJ_G0038363.1 mouse_genomes_project 11 128464325 128464399 + Snord1a snoRNA snoRNA MGP_NODShiLtJ_T0031639.1 MGP_NODShiLtJ_G0018847.1 mouse_genomes_project 11 105572231 105579271 - MGP_NODShiLtJ_P0031639 Atp5g1 protein_coding protein_coding MGP_NODShiLtJ_T0031640.1 MGP_NODShiLtJ_G0018847.1 mouse_genomes_project 11 105572246 105578637 - MGP_NODShiLtJ_P0031640 Atp5g1 protein_coding protein_coding MGP_NODShiLtJ_T0031641.1 MGP_NODShiLtJ_G0018847.1 mouse_genomes_project 11 105576384 105579182 - MGP_NODShiLtJ_P0031641 Atp5g1 protein_coding protein_coding MGP_NODShiLtJ_T0031642.1 MGP_NODShiLtJ_G0018847.1 mouse_genomes_project 11 105576387 105579220 - MGP_NODShiLtJ_P0031642 Atp5g1 protein_coding protein_coding MGP_NODShiLtJ_T0097902.1 MGP_NODShiLtJ_G0036314.1 mouse_genomes_project 11 118660078 118660190 + Gm27595 rRNA rRNA MGP_NODShiLtJ_T0028609.1 MGP_NODShiLtJ_G0018096.1 mouse_genomes_project 11 54725996 54748941 + MGP_NODShiLtJ_P0028609 Mgat4b protein_coding protein_coding MGP_NODShiLtJ_T0028610.1 MGP_NODShiLtJ_G0018096.1 mouse_genomes_project 11 54743176 54753954 + MGP_NODShiLtJ_P0028610 Mgat4b protein_coding protein_coding MGP_NODShiLtJ_T0028611.1 MGP_NODShiLtJ_G0018096.1 mouse_genomes_project 11 54748581 54753954 + MGP_NODShiLtJ_P0028611 Mgat4b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028612.1 MGP_NODShiLtJ_G0018096.1 mouse_genomes_project 11 54748589 54750618 + Mgat4b protein_coding retained_intron MGP_NODShiLtJ_T0028613.1 MGP_NODShiLtJ_G0018096.1 mouse_genomes_project 11 54752873 54753768 + Mgat4b protein_coding retained_intron MGP_NODShiLtJ_T0032620.1 MGP_NODShiLtJ_G0019106.1 mouse_genomes_project 11 113317459 113333774 + Nmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0032621.1 MGP_NODShiLtJ_G0019106.1 mouse_genomes_project 11 113317615 113362037 + MGP_NODShiLtJ_P0032621 Nmt1 protein_coding protein_coding MGP_NODShiLtJ_T0032622.1 MGP_NODShiLtJ_G0019106.1 mouse_genomes_project 11 113317854 113347506 + Nmt1 protein_coding processed_transcript MGP_NODShiLtJ_T0028214.1 MGP_NODShiLtJ_G0017983.1 mouse_genomes_project 11 33900056 33903626 + MGP_NODShiLtJ_P0028214 Snrnp25 protein_coding protein_coding MGP_NODShiLtJ_T0028215.1 MGP_NODShiLtJ_G0017983.1 mouse_genomes_project 11 33900087 33903050 + MGP_NODShiLtJ_P0028215 Snrnp25 protein_coding protein_coding MGP_NODShiLtJ_T0028216.1 MGP_NODShiLtJ_G0017983.1 mouse_genomes_project 11 33900099 33902293 + Snrnp25 protein_coding processed_transcript MGP_NODShiLtJ_T0028217.1 MGP_NODShiLtJ_G0017983.1 mouse_genomes_project 11 33900129 33903515 + MGP_NODShiLtJ_P0028217 Snrnp25 protein_coding protein_coding MGP_NODShiLtJ_T0028218.1 MGP_NODShiLtJ_G0017983.1 mouse_genomes_project 11 33901403 33903626 + Snrnp25 protein_coding retained_intron MGP_NODShiLtJ_T0098265.1 MGP_NODShiLtJ_G0036674.1 mouse_genomes_project 11 131208575 131209139 - Gm11753 sense_intronic sense_intronic MGP_NODShiLtJ_T0030195.1 MGP_NODShiLtJ_G0018472.1 mouse_genomes_project 11 77702033 77753755 - MGP_NODShiLtJ_P0030195 Nlrp1a protein_coding protein_coding MGP_NODShiLtJ_T0030196.1 MGP_NODShiLtJ_G0018472.1 mouse_genomes_project 11 77702033 77751425 - MGP_NODShiLtJ_P0030196 Nlrp1a protein_coding protein_coding MGP_NODShiLtJ_T0033059.1 MGP_NODShiLtJ_G0019204.1 mouse_genomes_project 11 125050836 125060640 + MGP_NODShiLtJ_P0033059 Sstr2 protein_coding protein_coding MGP_NODShiLtJ_T0033060.1 MGP_NODShiLtJ_G0019204.1 mouse_genomes_project 11 125050970 125060506 + MGP_NODShiLtJ_P0033060 Sstr2 protein_coding protein_coding MGP_NODShiLtJ_T0033061.1 MGP_NODShiLtJ_G0019204.1 mouse_genomes_project 11 125058867 125060247 + MGP_NODShiLtJ_P0033061 Sstr2 protein_coding protein_coding MGP_NODShiLtJ_T0028810.1 MGP_NODShiLtJ_G0018147.1 mouse_genomes_project 11 58349214 58349945 - MGP_NODShiLtJ_P0028810 Gm9837 protein_coding protein_coding MGP_NODShiLtJ_T0009632.1 MGP_NODShiLtJ_G0007765.1 mouse_genomes_project 11 90749829 90749892 - Mir7679 miRNA miRNA MGP_NODShiLtJ_T0032199.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110921949 110979896 - MGP_NODShiLtJ_P0032199 Stat3 protein_coding protein_coding MGP_NODShiLtJ_T0032200.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110923365 110925456 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0032201.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110923379 110979709 - MGP_NODShiLtJ_P0032201 Stat3 protein_coding protein_coding MGP_NODShiLtJ_T0032202.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110923824 110979808 - MGP_NODShiLtJ_P0032202 Stat3 protein_coding protein_coding MGP_NODShiLtJ_T0032203.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110924621 110928887 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0032204.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110928172 110928946 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0032205.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110928667 110929577 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0032206.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110929114 110934352 - Stat3 protein_coding processed_transcript MGP_NODShiLtJ_T0032207.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110929631 110930266 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0032208.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110929633 110933573 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0032209.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110937781 110942485 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0032210.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110942153 110942920 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0032211.1 MGP_NODShiLtJ_G0019026.1 mouse_genomes_project 11 110942729 110945297 - Stat3 protein_coding retained_intron MGP_NODShiLtJ_T0028191.1 MGP_NODShiLtJ_G0017976.1 mouse_genomes_project 11 32561192 32576305 - MGP_NODShiLtJ_P0028191 Chac2 protein_coding protein_coding MGP_NODShiLtJ_T0028192.1 MGP_NODShiLtJ_G0017976.1 mouse_genomes_project 11 32562360 32576289 - MGP_NODShiLtJ_P0028192 Chac2 protein_coding protein_coding MGP_NODShiLtJ_T0012369.1 MGP_NODShiLtJ_G0010477.1 mouse_genomes_project 11 13448755 13449352 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030477.1 MGP_NODShiLtJ_G0018562.1 mouse_genomes_project 11 82640218 82667887 + MGP_NODShiLtJ_P0030477 Prpf8 protein_coding protein_coding MGP_NODShiLtJ_T0030478.1 MGP_NODShiLtJ_G0018562.1 mouse_genomes_project 11 82640222 82667889 + MGP_NODShiLtJ_P0030478 Prpf8 protein_coding protein_coding MGP_NODShiLtJ_T0030479.1 MGP_NODShiLtJ_G0018562.1 mouse_genomes_project 11 82640257 82649212 + MGP_NODShiLtJ_P0030479 Prpf8 protein_coding protein_coding MGP_NODShiLtJ_T0030480.1 MGP_NODShiLtJ_G0018562.1 mouse_genomes_project 11 82645637 82647327 + Prpf8 protein_coding retained_intron MGP_NODShiLtJ_T0009628.1 MGP_NODShiLtJ_G0007761.1 mouse_genomes_project 11 85503695 85503767 + Mir451a miRNA miRNA MGP_NODShiLtJ_T0030822.1 MGP_NODShiLtJ_G0018634.1 mouse_genomes_project 11 85983952 85997436 - MGP_NODShiLtJ_P0030822 Tnfaip1 protein_coding protein_coding MGP_NODShiLtJ_T0030823.1 MGP_NODShiLtJ_G0018634.1 mouse_genomes_project 11 85983952 85997497 - MGP_NODShiLtJ_P0030823 Tnfaip1 protein_coding protein_coding MGP_NODShiLtJ_T0031927.1 MGP_NODShiLtJ_G0018918.1 mouse_genomes_project 11 108440451 108459193 + MGP_NODShiLtJ_P0031927 Psmd3 protein_coding protein_coding MGP_NODShiLtJ_T0031928.1 MGP_NODShiLtJ_G0018918.1 mouse_genomes_project 11 108440462 108455735 + Psmd3 protein_coding retained_intron MGP_NODShiLtJ_T0031929.1 MGP_NODShiLtJ_G0018918.1 mouse_genomes_project 11 108440488 108458263 + Psmd3 protein_coding retained_intron MGP_NODShiLtJ_T0031930.1 MGP_NODShiLtJ_G0018918.1 mouse_genomes_project 11 108445684 108457054 + MGP_NODShiLtJ_P0031930 Psmd3 protein_coding protein_coding MGP_NODShiLtJ_T0031931.1 MGP_NODShiLtJ_G0018918.1 mouse_genomes_project 11 108453678 108454687 + Psmd3 protein_coding retained_intron MGP_NODShiLtJ_T0033992.1 MGP_NODShiLtJ_G0019389.1 mouse_genomes_project 11 133125538 133135728 + MGP_NODShiLtJ_P0033992 Slc16a3 protein_coding protein_coding MGP_NODShiLtJ_T0033993.1 MGP_NODShiLtJ_G0019389.1 mouse_genomes_project 11 133126111 133133700 + MGP_NODShiLtJ_P0033993 Slc16a3 protein_coding protein_coding MGP_NODShiLtJ_T0033994.1 MGP_NODShiLtJ_G0019389.1 mouse_genomes_project 11 133126125 133135953 + MGP_NODShiLtJ_P0033994 Slc16a3 protein_coding protein_coding MGP_NODShiLtJ_T0033995.1 MGP_NODShiLtJ_G0019389.1 mouse_genomes_project 11 133126129 133133814 + MGP_NODShiLtJ_P0033995 Slc16a3 protein_coding protein_coding MGP_NODShiLtJ_T0033996.1 MGP_NODShiLtJ_G0019389.1 mouse_genomes_project 11 133126139 133137821 + MGP_NODShiLtJ_P0033996 Slc16a3 protein_coding protein_coding MGP_NODShiLtJ_T0033997.1 MGP_NODShiLtJ_G0019389.1 mouse_genomes_project 11 133127746 133132226 + MGP_NODShiLtJ_P0033997 Slc16a3 protein_coding protein_coding MGP_NODShiLtJ_T0033998.1 MGP_NODShiLtJ_G0019389.1 mouse_genomes_project 11 133128196 133131165 + Slc16a3 protein_coding processed_transcript MGP_NODShiLtJ_T0033999.1 MGP_NODShiLtJ_G0019389.1 mouse_genomes_project 11 133132178 133133184 + Slc16a3 protein_coding retained_intron MGP_NODShiLtJ_T0028924.1 MGP_NODShiLtJ_G0018173.1 mouse_genomes_project 11 59885722 59891093 + MGP_NODShiLtJ_P0028924 Hint1 protein_coding protein_coding MGP_NODShiLtJ_T0028925.1 MGP_NODShiLtJ_G0018173.1 mouse_genomes_project 11 59885820 59890899 + MGP_NODShiLtJ_P0028925 Hint1 protein_coding protein_coding MGP_NODShiLtJ_T0003316.1 MGP_NODShiLtJ_G0003049.1 mouse_genomes_project 11 132788376 132797800 + Myadml2os antisense antisense MGP_NODShiLtJ_T0003282.1 MGP_NODShiLtJ_G0003024.1 mouse_genomes_project 11 120374981 120377180 - antisense antisense MGP_NODShiLtJ_T0006241.1 MGP_NODShiLtJ_G0005206.1 mouse_genomes_project 11 96411902 96420094 + Gm15892 lincRNA lincRNA MGP_NODShiLtJ_T0006242.1 MGP_NODShiLtJ_G0005206.1 mouse_genomes_project 11 96418979 96419642 + Gm15892 lincRNA lincRNA MGP_NODShiLtJ_T0006243.1 MGP_NODShiLtJ_G0005206.1 mouse_genomes_project 11 96419039 96420070 + Gm15892 lincRNA lincRNA MGP_NODShiLtJ_T0003186.1 MGP_NODShiLtJ_G0002949.1 mouse_genomes_project 11 88507803 88515723 - 4930507D10Rik antisense antisense MGP_NODShiLtJ_T0028777.1 MGP_NODShiLtJ_G0018137.1 mouse_genomes_project 11 57154024 57161582 + 9530068E07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0028778.1 MGP_NODShiLtJ_G0018137.1 mouse_genomes_project 11 57154024 57166100 + MGP_NODShiLtJ_P0028778 9530068E07Rik protein_coding protein_coding MGP_NODShiLtJ_T0028779.1 MGP_NODShiLtJ_G0018137.1 mouse_genomes_project 11 57154024 57166095 + MGP_NODShiLtJ_P0028779 9530068E07Rik protein_coding protein_coding MGP_NODShiLtJ_T0028780.1 MGP_NODShiLtJ_G0018137.1 mouse_genomes_project 11 57154242 57160613 + 9530068E07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0031298.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96017637 96042991 + MGP_NODShiLtJ_P0031298 Bzrap1 protein_coding protein_coding MGP_NODShiLtJ_T0031299.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96017683 96042989 + MGP_NODShiLtJ_P0031299 Bzrap1 protein_coding protein_coding MGP_NODShiLtJ_T0031300.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96021807 96023472 + Bzrap1 protein_coding processed_transcript MGP_NODShiLtJ_T0031301.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96033170 96036579 + MGP_NODShiLtJ_P0031301 Bzrap1 protein_coding protein_coding MGP_NODShiLtJ_T0031302.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96033577 96042989 + MGP_NODShiLtJ_P0031302 Bzrap1 protein_coding protein_coding MGP_NODShiLtJ_T0031303.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96034135 96042989 + Bzrap1 protein_coding retained_intron MGP_NODShiLtJ_T0031304.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96035833 96042989 + Bzrap1 protein_coding retained_intron MGP_NODShiLtJ_T0031305.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96035992 96037330 + Bzrap1 protein_coding retained_intron MGP_NODShiLtJ_T0031306.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96037336 96041802 + MGP_NODShiLtJ_P0031306 Bzrap1 protein_coding protein_coding MGP_NODShiLtJ_T0031307.1 MGP_NODShiLtJ_G0018760.1 mouse_genomes_project 11 96038617 96040255 + Bzrap1 protein_coding retained_intron MGP_NODShiLtJ_T0099940.1 MGP_NODShiLtJ_G0038334.1 mouse_genomes_project 11 79363502 79363648 - Gm24143 snoRNA snoRNA MGP_NODShiLtJ_T0006207.1 MGP_NODShiLtJ_G0005182.1 mouse_genomes_project 11 78320782 78332229 - Gm12324 lincRNA lincRNA MGP_NODShiLtJ_T0099946.1 MGP_NODShiLtJ_G0038340.1 mouse_genomes_project 11 85618641 85618706 - Snord42a snoRNA snoRNA MGP_NODShiLtJ_T0101562.1 MGP_NODShiLtJ_G0039732.1 mouse_genomes_project 11 103884835 103886466 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099965.1 MGP_NODShiLtJ_G0038359.1 mouse_genomes_project 11 117141344 117141477 + Gm22711 snoRNA snoRNA MGP_NODShiLtJ_T0029359.1 MGP_NODShiLtJ_G0018298.1 mouse_genomes_project 11 67467879 67580131 - MGP_NODShiLtJ_P0029359 Ulk2 protein_coding protein_coding MGP_NODShiLtJ_T0029360.1 MGP_NODShiLtJ_G0018298.1 mouse_genomes_project 11 67469732 67579560 - Ulk2 protein_coding processed_transcript MGP_NODShiLtJ_T0029361.1 MGP_NODShiLtJ_G0018298.1 mouse_genomes_project 11 67497910 67502030 - Ulk2 protein_coding processed_transcript MGP_NODShiLtJ_T0033723.1 MGP_NODShiLtJ_G0019339.1 mouse_genomes_project 11 131437809 131541512 + MGP_NODShiLtJ_P0033723 Rnf213 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033724.1 MGP_NODShiLtJ_G0019339.1 mouse_genomes_project 11 131440803 131541500 + MGP_NODShiLtJ_P0033724 Rnf213 protein_coding protein_coding MGP_NODShiLtJ_T0033725.1 MGP_NODShiLtJ_G0019339.1 mouse_genomes_project 11 131440803 131541503 + MGP_NODShiLtJ_P0033725 Rnf213 protein_coding protein_coding MGP_NODShiLtJ_T0033726.1 MGP_NODShiLtJ_G0019339.1 mouse_genomes_project 11 131532141 131541502 + MGP_NODShiLtJ_P0033726 Rnf213 protein_coding protein_coding MGP_NODShiLtJ_T0032851.1 MGP_NODShiLtJ_G0019161.1 mouse_genomes_project 11 117019441 117126254 - MGP_NODShiLtJ_P0032851 Ern1 protein_coding protein_coding MGP_NODShiLtJ_T0032852.1 MGP_NODShiLtJ_G0019161.1 mouse_genomes_project 11 117022242 117126310 - Ern1 protein_coding processed_transcript MGP_NODShiLtJ_T0032853.1 MGP_NODShiLtJ_G0019161.1 mouse_genomes_project 11 117041236 117126294 - MGP_NODShiLtJ_P0032853 Ern1 protein_coding protein_coding MGP_NODShiLtJ_T0032854.1 MGP_NODShiLtJ_G0019161.1 mouse_genomes_project 11 117063104 117126266 - MGP_NODShiLtJ_P0032854 Ern1 protein_coding protein_coding MGP_NODShiLtJ_T0032855.1 MGP_NODShiLtJ_G0019161.1 mouse_genomes_project 11 117091879 117126261 - MGP_NODShiLtJ_P0032855 Ern1 protein_coding protein_coding MGP_NODShiLtJ_T0030384.1 MGP_NODShiLtJ_G0018540.1 mouse_genomes_project 11 81367560 81368609 - MGP_NODShiLtJ_P0030384 Olfr411 protein_coding protein_coding MGP_NODShiLtJ_T0030385.1 MGP_NODShiLtJ_G0018540.1 mouse_genomes_project 11 81367828 81373554 - MGP_NODShiLtJ_P0030385 Olfr411 protein_coding protein_coding MGP_NODShiLtJ_T0012550.1 MGP_NODShiLtJ_G0010658.1 mouse_genomes_project 11 82195497 82195971 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031504.1 MGP_NODShiLtJ_G0018809.1 mouse_genomes_project 11 103764225 103785779 - Mycbpap protein_coding retained_intron MGP_NODShiLtJ_T0031505.1 MGP_NODShiLtJ_G0018809.1 mouse_genomes_project 11 103764225 103766424 - Mycbpap protein_coding processed_transcript MGP_NODShiLtJ_T0031506.1 MGP_NODShiLtJ_G0018809.1 mouse_genomes_project 11 103764225 103770201 - MGP_NODShiLtJ_P0031506 Mycbpap protein_coding protein_coding MGP_NODShiLtJ_T0031507.1 MGP_NODShiLtJ_G0018809.1 mouse_genomes_project 11 103764225 103785779 - MGP_NODShiLtJ_P0031507 Mycbpap protein_coding protein_coding MGP_NODShiLtJ_T0031508.1 MGP_NODShiLtJ_G0018809.1 mouse_genomes_project 11 103765858 103766411 - Mycbpap protein_coding retained_intron MGP_NODShiLtJ_T0031509.1 MGP_NODShiLtJ_G0018809.1 mouse_genomes_project 11 103770545 103773019 - Mycbpap protein_coding retained_intron MGP_NODShiLtJ_T0031207.1 MGP_NODShiLtJ_G0018739.1 mouse_genomes_project 11 94647578 94695597 - MGP_NODShiLtJ_P0031207 Rps6kb1 protein_coding protein_coding MGP_NODShiLtJ_T0031208.1 MGP_NODShiLtJ_G0018739.1 mouse_genomes_project 11 94650786 94695597 - Rps6kb1 protein_coding retained_intron MGP_NODShiLtJ_T0031209.1 MGP_NODShiLtJ_G0018739.1 mouse_genomes_project 11 94651352 94661535 - Rps6kb1 protein_coding processed_transcript MGP_NODShiLtJ_T0031210.1 MGP_NODShiLtJ_G0018739.1 mouse_genomes_project 11 94663507 94669929 - Rps6kb1 protein_coding processed_transcript MGP_NODShiLtJ_T0031211.1 MGP_NODShiLtJ_G0018739.1 mouse_genomes_project 11 94663872 94695566 - MGP_NODShiLtJ_P0031211 Rps6kb1 protein_coding protein_coding MGP_NODShiLtJ_T0031212.1 MGP_NODShiLtJ_G0018739.1 mouse_genomes_project 11 94669533 94683712 - Rps6kb1 protein_coding retained_intron MGP_NODShiLtJ_T0031213.1 MGP_NODShiLtJ_G0018739.1 mouse_genomes_project 11 94683643 94695557 - MGP_NODShiLtJ_P0031213 Rps6kb1 protein_coding protein_coding MGP_NODShiLtJ_T0012516.1 MGP_NODShiLtJ_G0010624.1 mouse_genomes_project 11 67092685 67093099 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031367.1 MGP_NODShiLtJ_G0018778.1 mouse_genomes_project 11 97405617 97429915 + MGP_NODShiLtJ_P0031367 Coil protein_coding protein_coding MGP_NODShiLtJ_T0031368.1 MGP_NODShiLtJ_G0018778.1 mouse_genomes_project 11 97409163 97429915 + MGP_NODShiLtJ_P0031368 Coil protein_coding protein_coding MGP_NODShiLtJ_T0031369.1 MGP_NODShiLtJ_G0018778.1 mouse_genomes_project 11 97423798 97429256 + Coil protein_coding retained_intron MGP_NODShiLtJ_T0031110.1 MGP_NODShiLtJ_G0018719.1 mouse_genomes_project 11 92478486 92485738 - MGP_NODShiLtJ_P0031110 Lhx1 protein_coding protein_coding MGP_NODShiLtJ_T0031111.1 MGP_NODShiLtJ_G0018719.1 mouse_genomes_project 11 92479644 92482534 - MGP_NODShiLtJ_P0031111 Lhx1 protein_coding protein_coding MGP_NODShiLtJ_T0031112.1 MGP_NODShiLtJ_G0018719.1 mouse_genomes_project 11 92479908 92482270 - Lhx1 protein_coding retained_intron MGP_NODShiLtJ_T0031113.1 MGP_NODShiLtJ_G0018719.1 mouse_genomes_project 11 92482098 92482914 - MGP_NODShiLtJ_P0031113 Lhx1 protein_coding protein_coding MGP_NODShiLtJ_T0032059.1 MGP_NODShiLtJ_G0018979.1 mouse_genomes_project 11 109819020 109819910 + MGP_NODShiLtJ_P0032059 Gm11567 protein_coding protein_coding MGP_NODShiLtJ_T0012618.1 MGP_NODShiLtJ_G0010726.1 mouse_genomes_project 11 109759235 109759523 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029164.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65506686 65507583 - Pemt protein_coding processed_transcript MGP_NODShiLtJ_T0029165.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65506686 65590268 - MGP_NODShiLtJ_P0029165 Pemt protein_coding protein_coding MGP_NODShiLtJ_T0029166.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65506686 65578591 - MGP_NODShiLtJ_P0029166 Pemt protein_coding protein_coding MGP_NODShiLtJ_T0029167.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65506686 65590272 - MGP_NODShiLtJ_P0029167 Pemt protein_coding protein_coding MGP_NODShiLtJ_T0029168.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65506899 65578492 - Pemt protein_coding processed_transcript MGP_NODShiLtJ_T0029169.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65506916 65581763 - MGP_NODShiLtJ_P0029169 Pemt protein_coding protein_coding MGP_NODShiLtJ_T0029170.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65510226 65590280 - MGP_NODShiLtJ_P0029170 Pemt protein_coding protein_coding MGP_NODShiLtJ_T0029171.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65512931 65559803 - Pemt protein_coding processed_transcript MGP_NODShiLtJ_T0029172.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65512951 65519635 - Pemt protein_coding processed_transcript MGP_NODShiLtJ_T0029173.1 MGP_NODShiLtJ_G0018262.1 mouse_genomes_project 11 65588335 65590276 - Pemt protein_coding processed_transcript MGP_NODShiLtJ_T0012388.1 MGP_NODShiLtJ_G0010496.1 mouse_genomes_project 11 19697964 19698187 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012406.1 MGP_NODShiLtJ_G0010514.1 mouse_genomes_project 11 22768699 22769136 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098179.1 MGP_NODShiLtJ_G0036591.1 mouse_genomes_project 11 127916547 127916674 - Gm26413 scaRNA scaRNA MGP_NODShiLtJ_T0031568.1 MGP_NODShiLtJ_G0018827.1 mouse_genomes_project 11 104521562 104526716 + MGP_NODShiLtJ_P0031568 Dlx3 protein_coding protein_coding MGP_NODShiLtJ_T0028997.1 MGP_NODShiLtJ_G0018196.1 mouse_genomes_project 11 63436520 63484742 - MGP_NODShiLtJ_P0028997 Gemin5 protein_coding protein_coding MGP_NODShiLtJ_T0028998.1 MGP_NODShiLtJ_G0018196.1 mouse_genomes_project 11 63437808 63484742 - MGP_NODShiLtJ_P0028998 Gemin5 protein_coding protein_coding MGP_NODShiLtJ_T0028999.1 MGP_NODShiLtJ_G0018196.1 mouse_genomes_project 11 63437808 63484742 - MGP_NODShiLtJ_P0028999 Gemin5 protein_coding protein_coding MGP_NODShiLtJ_T0029000.1 MGP_NODShiLtJ_G0018196.1 mouse_genomes_project 11 63453394 63455995 - Gemin5 protein_coding processed_transcript MGP_NODShiLtJ_T0029001.1 MGP_NODShiLtJ_G0018196.1 mouse_genomes_project 11 63471352 63476980 - MGP_NODShiLtJ_P0029001 Gemin5 protein_coding protein_coding MGP_NODShiLtJ_T0006217.1 MGP_NODShiLtJ_G0005190.1 mouse_genomes_project 11 84823787 84825343 + 2210008F06Rik lincRNA lincRNA MGP_NODShiLtJ_T0027473.1 MGP_NODShiLtJ_G0017814.1 mouse_genomes_project 11 265003 301543 - MGP_NODShiLtJ_P0027473 Rnf185 protein_coding protein_coding MGP_NODShiLtJ_T0027474.1 MGP_NODShiLtJ_G0017814.1 mouse_genomes_project 11 265003 301543 - MGP_NODShiLtJ_P0027474 Rnf185 protein_coding protein_coding MGP_NODShiLtJ_T0027475.1 MGP_NODShiLtJ_G0017814.1 mouse_genomes_project 11 266897 301514 - Rnf185 protein_coding processed_transcript MGP_NODShiLtJ_T0032191.1 MGP_NODShiLtJ_G0019025.1 mouse_genomes_project 11 110883337 110920313 + MGP_NODShiLtJ_P0032191 Stat5a protein_coding protein_coding MGP_NODShiLtJ_T0032192.1 MGP_NODShiLtJ_G0019025.1 mouse_genomes_project 11 110883396 110887086 + MGP_NODShiLtJ_P0032192 Stat5a protein_coding protein_coding MGP_NODShiLtJ_T0032193.1 MGP_NODShiLtJ_G0019025.1 mouse_genomes_project 11 110883642 110920313 + MGP_NODShiLtJ_P0032193 Stat5a protein_coding protein_coding MGP_NODShiLtJ_T0032194.1 MGP_NODShiLtJ_G0019025.1 mouse_genomes_project 11 110885683 110888559 + MGP_NODShiLtJ_P0032194 Stat5a protein_coding protein_coding MGP_NODShiLtJ_T0032195.1 MGP_NODShiLtJ_G0019025.1 mouse_genomes_project 11 110885696 110920305 + MGP_NODShiLtJ_P0032195 Stat5a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0032196.1 MGP_NODShiLtJ_G0019025.1 mouse_genomes_project 11 110885822 110920312 + MGP_NODShiLtJ_P0032196 Stat5a protein_coding protein_coding MGP_NODShiLtJ_T0032197.1 MGP_NODShiLtJ_G0019025.1 mouse_genomes_project 11 110885823 110904920 + Stat5a protein_coding processed_transcript MGP_NODShiLtJ_T0032198.1 MGP_NODShiLtJ_G0019025.1 mouse_genomes_project 11 110914166 110915255 + Stat5a protein_coding processed_transcript MGP_NODShiLtJ_T0003259.1 MGP_NODShiLtJ_G0003006.1 mouse_genomes_project 11 114969783 114970772 - Gm11665 antisense antisense MGP_NODShiLtJ_T0029204.1 MGP_NODShiLtJ_G0018266.1 mouse_genomes_project 11 65917281 65937625 + MGP_NODShiLtJ_P0029204 Lrrc48 protein_coding protein_coding MGP_NODShiLtJ_T0029205.1 MGP_NODShiLtJ_G0018266.1 mouse_genomes_project 11 65917281 65961869 + MGP_NODShiLtJ_P0029205 Lrrc48 protein_coding protein_coding MGP_NODShiLtJ_T0029206.1 MGP_NODShiLtJ_G0018266.1 mouse_genomes_project 11 65917281 65942729 + MGP_NODShiLtJ_P0029206 Lrrc48 protein_coding protein_coding MGP_NODShiLtJ_T0029207.1 MGP_NODShiLtJ_G0018266.1 mouse_genomes_project 11 65917309 65940589 + Lrrc48 protein_coding processed_transcript MGP_NODShiLtJ_T0029208.1 MGP_NODShiLtJ_G0018266.1 mouse_genomes_project 11 65917332 65961861 + MGP_NODShiLtJ_P0029208 Lrrc48 protein_coding protein_coding MGP_NODShiLtJ_T0101561.1 MGP_NODShiLtJ_G0039731.1 mouse_genomes_project 11 91591772 91591916 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006110.1 MGP_NODShiLtJ_G0005098.1 mouse_genomes_project 11 12529074 12649151 - lincRNA lincRNA MGP_NODShiLtJ_T0032091.1 MGP_NODShiLtJ_G0019002.1 mouse_genomes_project 11 110317419 110320493 + MGP_NODShiLtJ_P0032091 Eif1 protein_coding protein_coding MGP_NODShiLtJ_T0032092.1 MGP_NODShiLtJ_G0019002.1 mouse_genomes_project 11 110318609 110319390 + MGP_NODShiLtJ_P0032092 Eif1 protein_coding protein_coding MGP_NODShiLtJ_T0032093.1 MGP_NODShiLtJ_G0019002.1 mouse_genomes_project 11 110318918 110319750 + Eif1 protein_coding processed_transcript MGP_NODShiLtJ_T0032094.1 MGP_NODShiLtJ_G0019002.1 mouse_genomes_project 11 110319108 110320146 + MGP_NODShiLtJ_P0032094 Eif1 protein_coding protein_coding MGP_NODShiLtJ_T0032095.1 MGP_NODShiLtJ_G0019002.1 mouse_genomes_project 11 110319284 110319930 + Eif1 protein_coding processed_transcript MGP_NODShiLtJ_T0027707.1 MGP_NODShiLtJ_G0017867.1 mouse_genomes_project 11 3004561 3010673 - MGP_NODShiLtJ_P0027707 Pold2 protein_coding protein_coding MGP_NODShiLtJ_T0027708.1 MGP_NODShiLtJ_G0017867.1 mouse_genomes_project 11 3004569 3005573 - Pold2 protein_coding retained_intron MGP_NODShiLtJ_T0027709.1 MGP_NODShiLtJ_G0017867.1 mouse_genomes_project 11 3006463 3010046 - MGP_NODShiLtJ_P0027709 Pold2 protein_coding protein_coding MGP_NODShiLtJ_T0027710.1 MGP_NODShiLtJ_G0017867.1 mouse_genomes_project 11 3006500 3009148 - Pold2 protein_coding retained_intron MGP_NODShiLtJ_T0027711.1 MGP_NODShiLtJ_G0017867.1 mouse_genomes_project 11 3007553 3010593 - Pold2 protein_coding processed_transcript MGP_NODShiLtJ_T0009581.1 MGP_NODShiLtJ_G0007714.1 mouse_genomes_project 11 54251970 54252047 + Gm23813 miRNA miRNA MGP_NODShiLtJ_T0006212.1 MGP_NODShiLtJ_G0005186.1 mouse_genomes_project 11 79798127 79801070 - 4732414G09Rik lincRNA lincRNA MGP_NODShiLtJ_T0006213.1 MGP_NODShiLtJ_G0005186.1 mouse_genomes_project 11 79798127 79801107 - 4732414G09Rik lincRNA lincRNA MGP_NODShiLtJ_T0009675.1 MGP_NODShiLtJ_G0007808.1 mouse_genomes_project 11 128931069 128931179 + Mir6516 miRNA miRNA MGP_NODShiLtJ_T0030863.1 MGP_NODShiLtJ_G0018647.1 mouse_genomes_project 11 87015307 87034789 - MGP_NODShiLtJ_P0030863 protein_coding protein_coding MGP_NODShiLtJ_T0030864.1 MGP_NODShiLtJ_G0018647.1 mouse_genomes_project 11 87015307 87034759 - MGP_NODShiLtJ_P0030864 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003230.1 MGP_NODShiLtJ_G0002982.1 mouse_genomes_project 11 107379557 107381581 + Gm11614 antisense antisense MGP_NODShiLtJ_T0009562.1 MGP_NODShiLtJ_G0007695.1 mouse_genomes_project 11 3575222 3575286 + Mir7651 miRNA miRNA MGP_NODShiLtJ_T0012561.1 MGP_NODShiLtJ_G0010669.1 mouse_genomes_project 11 86039745 86040864 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012509.1 MGP_NODShiLtJ_G0010617.1 mouse_genomes_project 11 65907194 65908156 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028429.1 MGP_NODShiLtJ_G0018039.1 mouse_genomes_project 11 49778818 49837966 + MGP_NODShiLtJ_P0028429 Clint1 protein_coding protein_coding MGP_NODShiLtJ_T0028430.1 MGP_NODShiLtJ_G0018039.1 mouse_genomes_project 11 49778818 49837966 + MGP_NODShiLtJ_P0028430 Clint1 protein_coding protein_coding MGP_NODShiLtJ_T0028431.1 MGP_NODShiLtJ_G0018039.1 mouse_genomes_project 11 49810324 49837966 + Clint1 protein_coding processed_transcript MGP_NODShiLtJ_T0099926.1 MGP_NODShiLtJ_G0038320.1 mouse_genomes_project 11 61408134 61408200 - Gm24253 snoRNA snoRNA MGP_NODShiLtJ_T0003232.1 MGP_NODShiLtJ_G0002984.1 mouse_genomes_project 11 108345431 108346214 + antisense antisense MGP_NODShiLtJ_T0003179.1 MGP_NODShiLtJ_G0002943.1 mouse_genomes_project 11 85850040 85861213 + Slc13a2os antisense antisense MGP_NODShiLtJ_T0029515.1 MGP_NODShiLtJ_G0018332.1 mouse_genomes_project 11 73209850 73219985 + MGP_NODShiLtJ_P0029515 Tmem220 protein_coding protein_coding MGP_NODShiLtJ_T0029516.1 MGP_NODShiLtJ_G0018332.1 mouse_genomes_project 11 73209850 73219485 + MGP_NODShiLtJ_P0029516 Tmem220 protein_coding protein_coding MGP_NODShiLtJ_T0029162.1 MGP_NODShiLtJ_G0018260.1 mouse_genomes_project 11 65484401 65498436 + MGP_NODShiLtJ_P0029162 Med9 protein_coding protein_coding MGP_NODShiLtJ_T0034000.1 MGP_NODShiLtJ_G0019390.1 mouse_genomes_project 11 133138701 133170875 - MGP_NODShiLtJ_P0034000 Csnk1d protein_coding protein_coding MGP_NODShiLtJ_T0034001.1 MGP_NODShiLtJ_G0019390.1 mouse_genomes_project 11 133138701 133170637 - MGP_NODShiLtJ_P0034001 Csnk1d protein_coding protein_coding MGP_NODShiLtJ_T0034002.1 MGP_NODShiLtJ_G0019390.1 mouse_genomes_project 11 133140600 133142639 - Csnk1d protein_coding processed_transcript MGP_NODShiLtJ_T0034003.1 MGP_NODShiLtJ_G0019390.1 mouse_genomes_project 11 133140725 133148578 - Csnk1d protein_coding processed_transcript MGP_NODShiLtJ_T0034004.1 MGP_NODShiLtJ_G0019390.1 mouse_genomes_project 11 133144564 133145014 - Csnk1d protein_coding processed_transcript MGP_NODShiLtJ_T0034005.1 MGP_NODShiLtJ_G0019390.1 mouse_genomes_project 11 133149424 133170416 - MGP_NODShiLtJ_P0034005 Csnk1d protein_coding protein_coding MGP_NODShiLtJ_T0034006.1 MGP_NODShiLtJ_G0019390.1 mouse_genomes_project 11 133149442 133170532 - MGP_NODShiLtJ_P0034006 Csnk1d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034007.1 MGP_NODShiLtJ_G0019390.1 mouse_genomes_project 11 133160222 133170596 - Csnk1d protein_coding retained_intron MGP_NODShiLtJ_T0030839.1 MGP_NODShiLtJ_G0018641.1 mouse_genomes_project 11 86463397 86485425 - MGP_NODShiLtJ_P0030839 Lgals9 protein_coding protein_coding MGP_NODShiLtJ_T0030840.1 MGP_NODShiLtJ_G0018641.1 mouse_genomes_project 11 86463402 86485403 - MGP_NODShiLtJ_P0030840 Lgals9 protein_coding protein_coding MGP_NODShiLtJ_T0030841.1 MGP_NODShiLtJ_G0018641.1 mouse_genomes_project 11 86463818 86485310 - MGP_NODShiLtJ_P0030841 Lgals9 protein_coding protein_coding MGP_NODShiLtJ_T0030842.1 MGP_NODShiLtJ_G0018641.1 mouse_genomes_project 11 86467304 86470754 - Lgals9 protein_coding retained_intron MGP_NODShiLtJ_T0033602.1 MGP_NODShiLtJ_G0019312.1 mouse_genomes_project 11 129749151 129763985 + MGP_NODShiLtJ_P0033602 Afmid protein_coding protein_coding MGP_NODShiLtJ_T0033603.1 MGP_NODShiLtJ_G0019312.1 mouse_genomes_project 11 129749201 129761313 + MGP_NODShiLtJ_P0033603 Afmid protein_coding protein_coding MGP_NODShiLtJ_T0033604.1 MGP_NODShiLtJ_G0019312.1 mouse_genomes_project 11 129749208 129755874 + Afmid protein_coding retained_intron MGP_NODShiLtJ_T0033605.1 MGP_NODShiLtJ_G0019312.1 mouse_genomes_project 11 129755327 129759496 + Afmid protein_coding retained_intron MGP_NODShiLtJ_T0033606.1 MGP_NODShiLtJ_G0019312.1 mouse_genomes_project 11 129755453 129761310 + Afmid protein_coding retained_intron MGP_NODShiLtJ_T0033607.1 MGP_NODShiLtJ_G0019312.1 mouse_genomes_project 11 129755496 129759603 + Afmid protein_coding retained_intron MGP_NODShiLtJ_T0028745.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713844 56750417 + MGP_NODShiLtJ_P0028745 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028746.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713844 56750417 + MGP_NODShiLtJ_P0028746 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028747.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713844 56744610 + MGP_NODShiLtJ_P0028747 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028748.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713844 56752818 + MGP_NODShiLtJ_P0028748 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028749.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713848 56738273 + MGP_NODShiLtJ_P0028749 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028750.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713864 56744677 + MGP_NODShiLtJ_P0028750 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028751.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713877 56729015 + MGP_NODShiLtJ_P0028751 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028752.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713888 56770633 + MGP_NODShiLtJ_P0028752 Cdkl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028753.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56713913 56750417 + MGP_NODShiLtJ_P0028753 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028754.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56714551 56752822 + MGP_NODShiLtJ_P0028754 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028755.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56737460 56797785 + MGP_NODShiLtJ_P0028755 Cdkl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028756.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56737684 56744532 + MGP_NODShiLtJ_P0028756 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028757.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56743167 56802468 + MGP_NODShiLtJ_P0028757 Cdkl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028758.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56743252 56802474 + MGP_NODShiLtJ_P0028758 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0028759.1 MGP_NODShiLtJ_G0018131.1 mouse_genomes_project 11 56744334 56802466 + MGP_NODShiLtJ_P0028759 Cdkl3 protein_coding protein_coding MGP_NODShiLtJ_T0006160.1 MGP_NODShiLtJ_G0005141.1 mouse_genomes_project 11 46748666 46765983 - lincRNA lincRNA MGP_NODShiLtJ_T0003206.1 MGP_NODShiLtJ_G0002964.1 mouse_genomes_project 11 97329279 97363270 + Scpep1os antisense antisense MGP_NODShiLtJ_T0012451.1 MGP_NODShiLtJ_G0010559.1 mouse_genomes_project 11 44550475 44551019 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009617.1 MGP_NODShiLtJ_G0007750.1 mouse_genomes_project 11 79405692 79405765 + Gm25678 miRNA miRNA MGP_NODShiLtJ_T0028469.1 MGP_NODShiLtJ_G0018052.1 mouse_genomes_project 11 50566289 50588695 + MGP_NODShiLtJ_P0028469 BC053393 protein_coding protein_coding MGP_NODShiLtJ_T0027697.1 MGP_NODShiLtJ_G0017864.1 mouse_genomes_project 11 2927742 2929835 - MGP_NODShiLtJ_P0027697 Pgam2 protein_coding protein_coding MGP_NODShiLtJ_T0032062.1 MGP_NODShiLtJ_G0018982.1 mouse_genomes_project 11 109881856 109891688 + MGP_NODShiLtJ_P0032062 protein_coding protein_coding MGP_NODShiLtJ_T0028626.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54902817 54915268 + MGP_NODShiLtJ_P0028626 Hnrnph1 protein_coding protein_coding MGP_NODShiLtJ_T0028627.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54903546 54915267 + MGP_NODShiLtJ_P0028627 Hnrnph1 protein_coding protein_coding MGP_NODShiLtJ_T0028628.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54903578 54915268 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028629.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54903592 54908498 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028630.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54903596 54912978 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028631.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54903596 54909084 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028632.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54903596 54915268 + MGP_NODShiLtJ_P0028632 Hnrnph1 protein_coding protein_coding MGP_NODShiLtJ_T0028633.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54904118 54908029 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028634.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54904118 54906017 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028635.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54904118 54906893 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028636.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54904128 54912980 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028637.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54908838 54911317 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028638.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54908978 54909925 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028639.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54909070 54915061 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028640.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54909133 54909812 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028641.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54909703 54911750 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028642.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54909722 54915129 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028643.1 MGP_NODShiLtJ_G0018101.1 mouse_genomes_project 11 54912019 54913282 + Hnrnph1 protein_coding processed_transcript MGP_NODShiLtJ_T0028297.1 MGP_NODShiLtJ_G0018007.1 mouse_genomes_project 11 36158112 36603304 - MGP_NODShiLtJ_P0028297 Dock2 protein_coding protein_coding MGP_NODShiLtJ_T0028298.1 MGP_NODShiLtJ_G0018007.1 mouse_genomes_project 11 36162067 36163185 - Dock2 protein_coding retained_intron MGP_NODShiLtJ_T0028299.1 MGP_NODShiLtJ_G0018007.1 mouse_genomes_project 11 36205371 36603304 - MGP_NODShiLtJ_P0028299 Dock2 protein_coding protein_coding MGP_NODShiLtJ_T0028300.1 MGP_NODShiLtJ_G0018007.1 mouse_genomes_project 11 36241202 36246186 - Dock2 protein_coding retained_intron MGP_NODShiLtJ_T0028303.1 MGP_NODShiLtJ_G0018007.1 mouse_genomes_project 11 36295789 36501629 - MGP_NODShiLtJ_P0028303 Dock2 protein_coding protein_coding MGP_NODShiLtJ_T0028304.1 MGP_NODShiLtJ_G0018007.1 mouse_genomes_project 11 36375798 36603295 - Dock2 protein_coding retained_intron MGP_NODShiLtJ_T0028305.1 MGP_NODShiLtJ_G0018007.1 mouse_genomes_project 11 36375798 36603304 - MGP_NODShiLtJ_P0028305 Dock2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028721.1 MGP_NODShiLtJ_G0018123.1 mouse_genomes_project 11 56304610 56312404 - MGP_NODShiLtJ_P0028721 N4bp3 protein_coding protein_coding MGP_NODShiLtJ_T0028722.1 MGP_NODShiLtJ_G0018123.1 mouse_genomes_project 11 56307101 56312399 - MGP_NODShiLtJ_P0028722 N4bp3 protein_coding protein_coding MGP_NODShiLtJ_T0028723.1 MGP_NODShiLtJ_G0018123.1 mouse_genomes_project 11 56307166 56312382 - MGP_NODShiLtJ_P0028723 N4bp3 protein_coding protein_coding MGP_NODShiLtJ_T0031051.1 MGP_NODShiLtJ_G0018701.1 mouse_genomes_project 11 91400750 91405499 - MGP_NODShiLtJ_P0031051 Ccl5 protein_coding protein_coding MGP_NODShiLtJ_T0031052.1 MGP_NODShiLtJ_G0018701.1 mouse_genomes_project 11 91403700 91405494 - Ccl5 protein_coding retained_intron MGP_NODShiLtJ_T0029038.1 MGP_NODShiLtJ_G0018213.1 mouse_genomes_project 11 63905761 63908049 - MGP_NODShiLtJ_P0029038 protein_coding protein_coding MGP_NODShiLtJ_T0030796.1 MGP_NODShiLtJ_G0018626.1 mouse_genomes_project 11 85813073 85842082 - MGP_NODShiLtJ_P0030796 Foxn1 protein_coding protein_coding MGP_NODShiLtJ_T0030313.1 MGP_NODShiLtJ_G0018504.1 mouse_genomes_project 11 79978368 79993649 - MGP_NODShiLtJ_P0030313 Ctns protein_coding protein_coding MGP_NODShiLtJ_T0030314.1 MGP_NODShiLtJ_G0018504.1 mouse_genomes_project 11 79978369 79993649 - MGP_NODShiLtJ_P0030314 Ctns protein_coding protein_coding MGP_NODShiLtJ_T0030315.1 MGP_NODShiLtJ_G0018504.1 mouse_genomes_project 11 79981124 79983579 - Ctns protein_coding retained_intron MGP_NODShiLtJ_T0030316.1 MGP_NODShiLtJ_G0018504.1 mouse_genomes_project 11 79986084 79993628 - Ctns protein_coding retained_intron MGP_NODShiLtJ_T0030317.1 MGP_NODShiLtJ_G0018504.1 mouse_genomes_project 11 79986486 79993602 - Ctns protein_coding processed_transcript MGP_NODShiLtJ_T0032746.1 MGP_NODShiLtJ_G0019134.1 mouse_genomes_project 11 115612516 115626496 + MGP_NODShiLtJ_P0032746 Mettl2 protein_coding protein_coding MGP_NODShiLtJ_T0032747.1 MGP_NODShiLtJ_G0019134.1 mouse_genomes_project 11 115612570 115626496 + Mettl2 protein_coding processed_transcript MGP_NODShiLtJ_T0032748.1 MGP_NODShiLtJ_G0019134.1 mouse_genomes_project 11 115618576 115625087 + Mettl2 protein_coding processed_transcript MGP_NODShiLtJ_T0032749.1 MGP_NODShiLtJ_G0019134.1 mouse_genomes_project 11 115618587 115621784 + Mettl2 protein_coding processed_transcript MGP_NODShiLtJ_T0032750.1 MGP_NODShiLtJ_G0019134.1 mouse_genomes_project 11 115623690 115626496 + Mettl2 protein_coding processed_transcript MGP_NODShiLtJ_T0003298.1 MGP_NODShiLtJ_G0003036.1 mouse_genomes_project 11 128948636 128950756 - Gm11730 antisense antisense MGP_NODShiLtJ_T0003299.1 MGP_NODShiLtJ_G0003036.1 mouse_genomes_project 11 128948773 128950716 - Gm11730 antisense antisense MGP_NODShiLtJ_T0030620.1 MGP_NODShiLtJ_G0018593.1 mouse_genomes_project 11 84525491 84722692 + MGP_NODShiLtJ_P0030620 Ssh2 protein_coding protein_coding MGP_NODShiLtJ_T0030621.1 MGP_NODShiLtJ_G0018593.1 mouse_genomes_project 11 84525491 84786486 + MGP_NODShiLtJ_P0030621 Ssh2 protein_coding protein_coding MGP_NODShiLtJ_T0030622.1 MGP_NODShiLtJ_G0018593.1 mouse_genomes_project 11 84672436 84675877 + Ssh2 protein_coding retained_intron MGP_NODShiLtJ_T0030623.1 MGP_NODShiLtJ_G0018593.1 mouse_genomes_project 11 84673968 84743224 + Ssh2 protein_coding processed_transcript MGP_NODShiLtJ_T0030624.1 MGP_NODShiLtJ_G0018593.1 mouse_genomes_project 11 84673970 84781787 + MGP_NODShiLtJ_P0030624 Ssh2 protein_coding protein_coding MGP_NODShiLtJ_T0030625.1 MGP_NODShiLtJ_G0018593.1 mouse_genomes_project 11 84673976 84761746 + Ssh2 protein_coding retained_intron MGP_NODShiLtJ_T0030626.1 MGP_NODShiLtJ_G0018593.1 mouse_genomes_project 11 84720975 84723542 + Ssh2 protein_coding retained_intron MGP_NODShiLtJ_T0027929.1 MGP_NODShiLtJ_G0017919.1 mouse_genomes_project 11 19440651 19547748 + MGP_NODShiLtJ_P0027929 Spred2 protein_coding protein_coding MGP_NODShiLtJ_T0027930.1 MGP_NODShiLtJ_G0017919.1 mouse_genomes_project 11 19440718 19545702 + MGP_NODShiLtJ_P0027930 Spred2 protein_coding protein_coding MGP_NODShiLtJ_T0027931.1 MGP_NODShiLtJ_G0017919.1 mouse_genomes_project 11 19471621 19538839 + MGP_NODShiLtJ_P0027931 Spred2 protein_coding protein_coding MGP_NODShiLtJ_T0098733.1 MGP_NODShiLtJ_G0037127.1 mouse_genomes_project 11 116883843 116883951 + Gm23645 snRNA snRNA MGP_NODShiLtJ_T0098662.1 MGP_NODShiLtJ_G0037056.1 mouse_genomes_project 11 540903 541032 - Gm26393 snRNA snRNA MGP_NODShiLtJ_T0012334.1 MGP_NODShiLtJ_G0010442.1 mouse_genomes_project 11 24204 24575 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031384.1 MGP_NODShiLtJ_G0018786.1 mouse_genomes_project 11 98538904 98546675 + MGP_NODShiLtJ_P0031384 Tmem100 protein_coding protein_coding MGP_NODShiLtJ_T0027676.1 MGP_NODShiLtJ_G0017858.1 mouse_genomes_project 11 2608991 2615438 + MGP_NODShiLtJ_P0027676 Xbp1 protein_coding protein_coding MGP_NODShiLtJ_T0027677.1 MGP_NODShiLtJ_G0017858.1 mouse_genomes_project 11 2609337 2613572 + Xbp1 protein_coding retained_intron MGP_NODShiLtJ_T0027678.1 MGP_NODShiLtJ_G0017858.1 mouse_genomes_project 11 2609995 2614489 + MGP_NODShiLtJ_P0027678 Xbp1 protein_coding protein_coding MGP_NODShiLtJ_T0027679.1 MGP_NODShiLtJ_G0017858.1 mouse_genomes_project 11 2610255 2614651 + MGP_NODShiLtJ_P0027679 Xbp1 protein_coding protein_coding MGP_NODShiLtJ_T0030197.1 MGP_NODShiLtJ_G0018473.1 mouse_genomes_project 11 77765786 77806304 - MGP_NODShiLtJ_P0030197 Nlrp1b protein_coding protein_coding MGP_NODShiLtJ_T0030198.1 MGP_NODShiLtJ_G0018473.1 mouse_genomes_project 11 77768653 77806151 - MGP_NODShiLtJ_P0030198 Nlrp1b protein_coding protein_coding MGP_NODShiLtJ_T0031806.1 MGP_NODShiLtJ_G0018889.1 mouse_genomes_project 11 107402600 107410340 - Cwc25 protein_coding processed_transcript MGP_NODShiLtJ_T0031807.1 MGP_NODShiLtJ_G0018889.1 mouse_genomes_project 11 107402734 107425837 - MGP_NODShiLtJ_P0031807 Cwc25 protein_coding protein_coding MGP_NODShiLtJ_T0031808.1 MGP_NODShiLtJ_G0018889.1 mouse_genomes_project 11 107404785 107412074 - MGP_NODShiLtJ_P0031808 Cwc25 protein_coding protein_coding MGP_NODShiLtJ_T0031809.1 MGP_NODShiLtJ_G0018889.1 mouse_genomes_project 11 107415530 107425821 - MGP_NODShiLtJ_P0031809 Cwc25 protein_coding protein_coding MGP_NODShiLtJ_T0028980.1 MGP_NODShiLtJ_G0018190.1 mouse_genomes_project 11 62749898 62765837 + MGP_NODShiLtJ_P0028980 Mfap3 protein_coding protein_coding MGP_NODShiLtJ_T0028981.1 MGP_NODShiLtJ_G0018190.1 mouse_genomes_project 11 62749920 62761247 + Mfap3 protein_coding retained_intron MGP_NODShiLtJ_T0028982.1 MGP_NODShiLtJ_G0018190.1 mouse_genomes_project 11 62749921 62765836 + MGP_NODShiLtJ_P0028982 Mfap3 protein_coding protein_coding MGP_NODShiLtJ_T0028983.1 MGP_NODShiLtJ_G0018190.1 mouse_genomes_project 11 62754204 62761675 + MGP_NODShiLtJ_P0028983 Mfap3 protein_coding protein_coding MGP_NODShiLtJ_T0032680.1 MGP_NODShiLtJ_G0019117.1 mouse_genomes_project 11 113837054 113931031 - MGP_NODShiLtJ_P0032680 protein_coding protein_coding MGP_NODShiLtJ_T0003192.1 MGP_NODShiLtJ_G0002954.1 mouse_genomes_project 11 90702603 90722154 - Slfn5os antisense antisense MGP_NODShiLtJ_T0029562.1 MGP_NODShiLtJ_G0018345.1 mouse_genomes_project 11 74110108 74176674 - MGP_NODShiLtJ_P0029562 Usp43 protein_coding protein_coding MGP_NODShiLtJ_T0029563.1 MGP_NODShiLtJ_G0018345.1 mouse_genomes_project 11 74110108 74176674 - MGP_NODShiLtJ_P0029563 Usp43 protein_coding protein_coding MGP_NODShiLtJ_T0029564.1 MGP_NODShiLtJ_G0018345.1 mouse_genomes_project 11 74110937 74128489 - Usp43 protein_coding retained_intron MGP_NODShiLtJ_T0029565.1 MGP_NODShiLtJ_G0018345.1 mouse_genomes_project 11 74150295 74175730 - Usp43 protein_coding processed_transcript MGP_NODShiLtJ_T0012538.1 MGP_NODShiLtJ_G0010646.1 mouse_genomes_project 11 77329641 77330062 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097901.1 MGP_NODShiLtJ_G0036313.1 mouse_genomes_project 11 108000314 108000421 - n-R5s73 rRNA rRNA MGP_NODShiLtJ_T0031545.1 MGP_NODShiLtJ_G0018821.1 mouse_genomes_project 11 104356501 104369981 - MGP_NODShiLtJ_P0031545 Sgca protein_coding protein_coding MGP_NODShiLtJ_T0031546.1 MGP_NODShiLtJ_G0018821.1 mouse_genomes_project 11 104356507 104364330 - MGP_NODShiLtJ_P0031546 Sgca protein_coding protein_coding MGP_NODShiLtJ_T0031547.1 MGP_NODShiLtJ_G0018821.1 mouse_genomes_project 11 104356532 104367117 - MGP_NODShiLtJ_P0031547 Sgca protein_coding protein_coding MGP_NODShiLtJ_T0031548.1 MGP_NODShiLtJ_G0018821.1 mouse_genomes_project 11 104356918 104369981 - MGP_NODShiLtJ_P0031548 Sgca protein_coding protein_coding MGP_NODShiLtJ_T0031550.1 MGP_NODShiLtJ_G0018821.1 mouse_genomes_project 11 104365879 104367143 - MGP_NODShiLtJ_P0031550 Sgca protein_coding protein_coding MGP_NODShiLtJ_T0017086.1 MGP_NODShiLtJ_G0015053.1 mouse_genomes_project 11 78983998 78986153 + 1700051A21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017087.1 MGP_NODShiLtJ_G0015053.1 mouse_genomes_project 11 78984421 78986135 + 1700051A21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0031244.1 MGP_NODShiLtJ_G0018749.1 mouse_genomes_project 11 95290486 95305581 + MGP_NODShiLtJ_P0031244 Ska2 protein_coding protein_coding MGP_NODShiLtJ_T0031245.1 MGP_NODShiLtJ_G0018749.1 mouse_genomes_project 11 95290503 95305580 + Ska2 protein_coding processed_transcript MGP_NODShiLtJ_T0031246.1 MGP_NODShiLtJ_G0018749.1 mouse_genomes_project 11 95297121 95303053 + Ska2 protein_coding processed_transcript MGP_NODShiLtJ_T0033362.1 MGP_NODShiLtJ_G0019268.1 mouse_genomes_project 11 127777723 127810317 + MGP_NODShiLtJ_P0033362 Unk protein_coding protein_coding MGP_NODShiLtJ_T0033363.1 MGP_NODShiLtJ_G0019268.1 mouse_genomes_project 11 127777723 127810317 + MGP_NODShiLtJ_P0033363 Unk protein_coding protein_coding MGP_NODShiLtJ_T0033364.1 MGP_NODShiLtJ_G0019268.1 mouse_genomes_project 11 127777724 127788584 + Unk protein_coding processed_transcript MGP_NODShiLtJ_T0033365.1 MGP_NODShiLtJ_G0019268.1 mouse_genomes_project 11 127786059 127810317 + Unk protein_coding processed_transcript MGP_NODShiLtJ_T0033366.1 MGP_NODShiLtJ_G0019268.1 mouse_genomes_project 11 127798397 127802781 + Unk protein_coding retained_intron MGP_NODShiLtJ_T0033367.1 MGP_NODShiLtJ_G0019268.1 mouse_genomes_project 11 127802397 127805170 + Unk protein_coding retained_intron MGP_NODShiLtJ_T0033368.1 MGP_NODShiLtJ_G0019268.1 mouse_genomes_project 11 127805000 127808209 + Unk protein_coding retained_intron MGP_NODShiLtJ_T0006141.1 MGP_NODShiLtJ_G0005124.1 mouse_genomes_project 11 29922682 29934601 + 2810471M01Rik lincRNA lincRNA MGP_NODShiLtJ_T0031647.1 MGP_NODShiLtJ_G0018850.1 mouse_genomes_project 11 105722744 105725876 + MGP_NODShiLtJ_P0031647 Hoxb13 protein_coding protein_coding MGP_NODShiLtJ_T0031370.1 MGP_NODShiLtJ_G0018779.1 mouse_genomes_project 11 97437584 97458348 + MGP_NODShiLtJ_P0031370 Trim25 protein_coding protein_coding MGP_NODShiLtJ_T0031371.1 MGP_NODShiLtJ_G0018779.1 mouse_genomes_project 11 97437584 97458348 + MGP_NODShiLtJ_P0031371 Trim25 protein_coding protein_coding MGP_NODShiLtJ_T0031372.1 MGP_NODShiLtJ_G0018779.1 mouse_genomes_project 11 97437584 97451784 + MGP_NODShiLtJ_P0031372 Trim25 protein_coding protein_coding MGP_NODShiLtJ_T0017160.1 MGP_NODShiLtJ_G0015090.1 mouse_genomes_project 11 129317375 129331300 + Gm11732 processed_transcript processed_transcript MGP_NODShiLtJ_T0027698.1 MGP_NODShiLtJ_G0017865.1 mouse_genomes_project 11 2958604 2968538 - MGP_NODShiLtJ_P0027698 Polm protein_coding protein_coding MGP_NODShiLtJ_T0027699.1 MGP_NODShiLtJ_G0017865.1 mouse_genomes_project 11 2958605 2968765 - MGP_NODShiLtJ_P0027699 Polm protein_coding protein_coding MGP_NODShiLtJ_T0027700.1 MGP_NODShiLtJ_G0017865.1 mouse_genomes_project 11 2959959 2960945 - Polm protein_coding processed_transcript MGP_NODShiLtJ_T0027701.1 MGP_NODShiLtJ_G0017865.1 mouse_genomes_project 11 2965538 2967235 - Polm protein_coding processed_transcript MGP_NODShiLtJ_T0027702.1 MGP_NODShiLtJ_G0017865.1 mouse_genomes_project 11 2967027 2968501 - Polm protein_coding processed_transcript MGP_NODShiLtJ_T0027703.1 MGP_NODShiLtJ_G0017865.1 mouse_genomes_project 11 2967050 2968542 - Polm protein_coding processed_transcript MGP_NODShiLtJ_T0028445.1 MGP_NODShiLtJ_G0018045.1 mouse_genomes_project 11 50148778 50276805 - MGP_NODShiLtJ_P0028445 Cyfip2 protein_coding protein_coding MGP_NODShiLtJ_T0028446.1 MGP_NODShiLtJ_G0018045.1 mouse_genomes_project 11 50148778 50276304 - MGP_NODShiLtJ_P0028446 Cyfip2 protein_coding protein_coding MGP_NODShiLtJ_T0028447.1 MGP_NODShiLtJ_G0018045.1 mouse_genomes_project 11 50148783 50276240 - MGP_NODShiLtJ_P0028447 Cyfip2 protein_coding protein_coding MGP_NODShiLtJ_T0028448.1 MGP_NODShiLtJ_G0018045.1 mouse_genomes_project 11 50151000 50233149 - MGP_NODShiLtJ_P0028448 Cyfip2 protein_coding protein_coding MGP_NODShiLtJ_T0028450.1 MGP_NODShiLtJ_G0018045.1 mouse_genomes_project 11 50254613 50276166 - MGP_NODShiLtJ_P0028450 Cyfip2 protein_coding protein_coding MGP_NODShiLtJ_T0006149.1 MGP_NODShiLtJ_G0005130.1 mouse_genomes_project 11 33776497 33782454 - Gm12108 lincRNA lincRNA MGP_NODShiLtJ_T0028369.1 MGP_NODShiLtJ_G0018024.1 mouse_genomes_project 11 46674574 46676087 + MGP_NODShiLtJ_P0028369 Gm9972 protein_coding protein_coding MGP_NODShiLtJ_T0012339.1 MGP_NODShiLtJ_G0010447.1 mouse_genomes_project 11 583141 584038 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006299.1 MGP_NODShiLtJ_G0005247.1 mouse_genomes_project 11 127731886 127738816 - B230344G16Rik lincRNA lincRNA MGP_NODShiLtJ_T0029603.1 MGP_NODShiLtJ_G0018354.1 mouse_genomes_project 11 75149739 75185977 - MGP_NODShiLtJ_P0029603 Ndel1 protein_coding protein_coding MGP_NODShiLtJ_T0029604.1 MGP_NODShiLtJ_G0018354.1 mouse_genomes_project 11 75150415 75172768 - Ndel1 protein_coding processed_transcript MGP_NODShiLtJ_T0029605.1 MGP_NODShiLtJ_G0018354.1 mouse_genomes_project 11 75161796 75210270 - MGP_NODShiLtJ_P0029605 Ndel1 protein_coding protein_coding MGP_NODShiLtJ_T0029606.1 MGP_NODShiLtJ_G0018354.1 mouse_genomes_project 11 75161808 75185883 - MGP_NODShiLtJ_P0029606 Ndel1 protein_coding protein_coding MGP_NODShiLtJ_T0029607.1 MGP_NODShiLtJ_G0018354.1 mouse_genomes_project 11 75169338 75192835 - Ndel1 protein_coding processed_transcript MGP_NODShiLtJ_T0029608.1 MGP_NODShiLtJ_G0018354.1 mouse_genomes_project 11 75172761 75202967 - Ndel1 protein_coding processed_transcript MGP_NODShiLtJ_T0031881.1 MGP_NODShiLtJ_G0018905.1 mouse_genomes_project 11 108088887 108112678 + MGP_NODShiLtJ_P0031881 Stard3 protein_coding protein_coding MGP_NODShiLtJ_T0031882.1 MGP_NODShiLtJ_G0018905.1 mouse_genomes_project 11 108088949 108108409 + Stard3 protein_coding processed_transcript MGP_NODShiLtJ_T0031883.1 MGP_NODShiLtJ_G0018905.1 mouse_genomes_project 11 108088950 108112691 + Stard3 protein_coding processed_transcript MGP_NODShiLtJ_T0031884.1 MGP_NODShiLtJ_G0018905.1 mouse_genomes_project 11 108088963 108108414 + Stard3 protein_coding processed_transcript MGP_NODShiLtJ_T0031885.1 MGP_NODShiLtJ_G0018905.1 mouse_genomes_project 11 108107098 108110227 + Stard3 protein_coding processed_transcript MGP_NODShiLtJ_T0031886.1 MGP_NODShiLtJ_G0018905.1 mouse_genomes_project 11 108108025 108109808 + Stard3 protein_coding processed_transcript MGP_NODShiLtJ_T0031887.1 MGP_NODShiLtJ_G0018905.1 mouse_genomes_project 11 108109734 108110927 + Stard3 protein_coding processed_transcript MGP_NODShiLtJ_T0030941.1 MGP_NODShiLtJ_G0018663.1 mouse_genomes_project 11 88086723 88101811 + MGP_NODShiLtJ_P0030941 Cdk5r1 protein_coding protein_coding MGP_NODShiLtJ_T0030942.1 MGP_NODShiLtJ_G0018663.1 mouse_genomes_project 11 88086756 88087624 + MGP_NODShiLtJ_P0030942 Cdk5r1 protein_coding protein_coding MGP_NODShiLtJ_T0031017.1 MGP_NODShiLtJ_G0018691.1 mouse_genomes_project 11 91040307 91066375 + MGP_NODShiLtJ_P0031017 protein_coding protein_coding MGP_NODShiLtJ_T0099948.1 MGP_NODShiLtJ_G0038342.1 mouse_genomes_project 11 85620398 85620467 - Snord42b snoRNA snoRNA MGP_NODShiLtJ_T0029718.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75713339 75718675 - Chd3 protein_coding retained_intron MGP_NODShiLtJ_T0029719.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75713339 75716084 - Chd3 protein_coding retained_intron MGP_NODShiLtJ_T0029720.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75713339 75740314 - MGP_NODShiLtJ_P0029720 Chd3 protein_coding protein_coding MGP_NODShiLtJ_T0029721.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75714414 75740278 - MGP_NODShiLtJ_P0029721 Chd3 protein_coding protein_coding MGP_NODShiLtJ_T0029722.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75715199 75735687 - MGP_NODShiLtJ_P0029722 Chd3 protein_coding protein_coding MGP_NODShiLtJ_T0029723.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75716200 75717199 - Chd3 protein_coding retained_intron MGP_NODShiLtJ_T0029724.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75723933 75724531 - Chd3 protein_coding retained_intron MGP_NODShiLtJ_T0029725.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75724526 75727538 - MGP_NODShiLtJ_P0029725 Chd3 protein_coding protein_coding MGP_NODShiLtJ_T0029726.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75731649 75732664 - MGP_NODShiLtJ_P0029726 Chd3 protein_coding protein_coding MGP_NODShiLtJ_T0029727.1 MGP_NODShiLtJ_G0018377.1 mouse_genomes_project 11 75731666 75732664 - MGP_NODShiLtJ_P0029727 Chd3 protein_coding protein_coding MGP_NODShiLtJ_T0012363.1 MGP_NODShiLtJ_G0010471.1 mouse_genomes_project 11 9192207 9193037 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099918.1 MGP_NODShiLtJ_G0038312.1 mouse_genomes_project 11 37048067 37048204 + Gm26070 snoRNA snoRNA MGP_NODShiLtJ_T0030338.1 MGP_NODShiLtJ_G0018512.1 mouse_genomes_project 11 80200740 80205160 - MGP_NODShiLtJ_P0030338 Olfr1 protein_coding protein_coding MGP_NODShiLtJ_T0030339.1 MGP_NODShiLtJ_G0018512.1 mouse_genomes_project 11 80201096 80205160 - MGP_NODShiLtJ_P0030339 Olfr1 protein_coding protein_coding MGP_NODShiLtJ_T0028451.1 MGP_NODShiLtJ_G0018047.1 mouse_genomes_project 11 50289728 50358407 - MGP_NODShiLtJ_P0028451 Itk protein_coding protein_coding MGP_NODShiLtJ_T0028452.1 MGP_NODShiLtJ_G0018047.1 mouse_genomes_project 11 50289728 50358429 - MGP_NODShiLtJ_P0028452 Itk protein_coding protein_coding MGP_NODShiLtJ_T0028453.1 MGP_NODShiLtJ_G0018047.1 mouse_genomes_project 11 50309066 50358371 - MGP_NODShiLtJ_P0028453 Itk protein_coding protein_coding MGP_NODShiLtJ_T0028454.1 MGP_NODShiLtJ_G0018047.1 mouse_genomes_project 11 50330655 50358375 - Itk protein_coding retained_intron MGP_NODShiLtJ_T0031059.1 MGP_NODShiLtJ_G0018705.1 mouse_genomes_project 11 91532049 91533561 - MGP_NODShiLtJ_P0031059 Ccl3 protein_coding protein_coding MGP_NODShiLtJ_T0012355.1 MGP_NODShiLtJ_G0010463.1 mouse_genomes_project 11 4010414 4022296 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012456.1 MGP_NODShiLtJ_G0010564.1 mouse_genomes_project 11 47410367 47411051 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030012.1 MGP_NODShiLtJ_G0018439.1 mouse_genomes_project 11 76823173 76830200 - MGP_NODShiLtJ_P0030012 Alox12e protein_coding protein_coding MGP_NODShiLtJ_T0030013.1 MGP_NODShiLtJ_G0018439.1 mouse_genomes_project 11 76827542 76829149 - Alox12e protein_coding retained_intron MGP_NODShiLtJ_T0030014.1 MGP_NODShiLtJ_G0018439.1 mouse_genomes_project 11 76828565 76829426 - Alox12e protein_coding retained_intron MGP_NODShiLtJ_T0030015.1 MGP_NODShiLtJ_G0018439.1 mouse_genomes_project 11 76828626 76830020 - Alox12e protein_coding retained_intron MGP_NODShiLtJ_T0029002.1 MGP_NODShiLtJ_G0018197.1 mouse_genomes_project 11 63490530 63500154 + MGP_NODShiLtJ_P0029002 Mrpl22 protein_coding protein_coding MGP_NODShiLtJ_T0029003.1 MGP_NODShiLtJ_G0018197.1 mouse_genomes_project 11 63490545 63495065 + Mrpl22 protein_coding processed_transcript MGP_NODShiLtJ_T0029004.1 MGP_NODShiLtJ_G0018197.1 mouse_genomes_project 11 63490558 63496143 + Mrpl22 protein_coding processed_transcript MGP_NODShiLtJ_T0032054.1 MGP_NODShiLtJ_G0018974.1 mouse_genomes_project 11 109755423 109756688 - MGP_NODShiLtJ_P0032054 2300003K06Rik protein_coding protein_coding MGP_NODShiLtJ_T0099914.1 MGP_NODShiLtJ_G0038308.1 mouse_genomes_project 11 27736673 27736792 - Gm24850 snoRNA snoRNA MGP_NODShiLtJ_T0003237.1 MGP_NODShiLtJ_G0002987.1 mouse_genomes_project 11 109277828 109278607 + A830036E02Rik antisense antisense MGP_NODShiLtJ_T0003238.1 MGP_NODShiLtJ_G0002987.1 mouse_genomes_project 11 109278115 109283987 + A830036E02Rik antisense antisense MGP_NODShiLtJ_T0003239.1 MGP_NODShiLtJ_G0002987.1 mouse_genomes_project 11 109278120 109279150 + A830036E02Rik antisense antisense MGP_NODShiLtJ_T0003240.1 MGP_NODShiLtJ_G0002987.1 mouse_genomes_project 11 109280835 109286386 + A830036E02Rik antisense antisense MGP_NODShiLtJ_T0030645.1 MGP_NODShiLtJ_G0018597.1 mouse_genomes_project 11 84847614 84852889 - MGP_NODShiLtJ_P0030645 Trp53i13 protein_coding protein_coding MGP_NODShiLtJ_T0030646.1 MGP_NODShiLtJ_G0018597.1 mouse_genomes_project 11 84848126 84852282 - Trp53i13 protein_coding processed_transcript MGP_NODShiLtJ_T0030647.1 MGP_NODShiLtJ_G0018597.1 mouse_genomes_project 11 84848485 84852554 - Trp53i13 protein_coding processed_transcript MGP_NODShiLtJ_T0030648.1 MGP_NODShiLtJ_G0018597.1 mouse_genomes_project 11 84848616 84855920 - MGP_NODShiLtJ_P0030648 Trp53i13 protein_coding protein_coding MGP_NODShiLtJ_T0030649.1 MGP_NODShiLtJ_G0018597.1 mouse_genomes_project 11 84852262 84856169 - Trp53i13 protein_coding processed_transcript MGP_NODShiLtJ_T0098721.1 MGP_NODShiLtJ_G0037115.1 mouse_genomes_project 11 108159325 108159416 - Gm25048 snRNA snRNA MGP_NODShiLtJ_T0030383.1 MGP_NODShiLtJ_G0018539.1 mouse_genomes_project 11 81353471 81354419 - MGP_NODShiLtJ_P0030383 Olfr410 protein_coding protein_coding MGP_NODShiLtJ_T0003265.1 MGP_NODShiLtJ_G0003011.1 mouse_genomes_project 11 116736692 116738462 - antisense antisense MGP_NODShiLtJ_T0012568.1 MGP_NODShiLtJ_G0010676.1 mouse_genomes_project 11 88480603 88481017 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101559.1 MGP_NODShiLtJ_G0039729.1 mouse_genomes_project 11 91577053 91577900 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0028389.1 MGP_NODShiLtJ_G0018028.1 mouse_genomes_project 11 47184054 47201465 + MGP_NODShiLtJ_P0028389 C1qtnf2 protein_coding protein_coding MGP_NODShiLtJ_T0028390.1 MGP_NODShiLtJ_G0018028.1 mouse_genomes_project 11 47184084 47201485 + MGP_NODShiLtJ_P0028390 C1qtnf2 protein_coding protein_coding MGP_NODShiLtJ_T0028391.1 MGP_NODShiLtJ_G0018028.1 mouse_genomes_project 11 47190541 47200824 + MGP_NODShiLtJ_P0028391 C1qtnf2 protein_coding protein_coding MGP_NODShiLtJ_T0006237.1 MGP_NODShiLtJ_G0005202.1 mouse_genomes_project 11 92742733 92756790 - Gm11431 lincRNA lincRNA MGP_NODShiLtJ_T0012370.1 MGP_NODShiLtJ_G0010478.1 mouse_genomes_project 11 13531326 13532073 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012436.1 MGP_NODShiLtJ_G0010544.1 mouse_genomes_project 11 34532539 34533497 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017095.1 MGP_NODShiLtJ_G0015059.1 mouse_genomes_project 11 90686288 90687527 - processed_transcript processed_transcript MGP_NODShiLtJ_T0030365.1 MGP_NODShiLtJ_G0018530.1 mouse_genomes_project 11 81000080 81012317 - MGP_NODShiLtJ_P0030365 Olfr139 protein_coding protein_coding MGP_NODShiLtJ_T0030366.1 MGP_NODShiLtJ_G0018530.1 mouse_genomes_project 11 81000080 81001028 - MGP_NODShiLtJ_P0030366 Olfr139 protein_coding protein_coding MGP_NODShiLtJ_T0030367.1 MGP_NODShiLtJ_G0018530.1 mouse_genomes_project 11 81006202 81009799 - Olfr139 protein_coding processed_transcript MGP_NODShiLtJ_T0030726.1 MGP_NODShiLtJ_G0018613.1 mouse_genomes_project 11 85603619 85613954 - Nek8 protein_coding retained_intron MGP_NODShiLtJ_T0030727.1 MGP_NODShiLtJ_G0018613.1 mouse_genomes_project 11 85603619 85614018 - MGP_NODShiLtJ_P0030727 Nek8 protein_coding protein_coding MGP_NODShiLtJ_T0030728.1 MGP_NODShiLtJ_G0018613.1 mouse_genomes_project 11 85603623 85604901 - Nek8 protein_coding retained_intron MGP_NODShiLtJ_T0030729.1 MGP_NODShiLtJ_G0018613.1 mouse_genomes_project 11 85604034 85613970 - Nek8 protein_coding retained_intron MGP_NODShiLtJ_T0030730.1 MGP_NODShiLtJ_G0018613.1 mouse_genomes_project 11 85604767 85605547 - Nek8 protein_coding retained_intron MGP_NODShiLtJ_T0030731.1 MGP_NODShiLtJ_G0018613.1 mouse_genomes_project 11 85606485 85607342 - Nek8 protein_coding retained_intron MGP_NODShiLtJ_T0030732.1 MGP_NODShiLtJ_G0018613.1 mouse_genomes_project 11 85607504 85613957 - Nek8 protein_coding retained_intron MGP_NODShiLtJ_T0030733.1 MGP_NODShiLtJ_G0018613.1 mouse_genomes_project 11 85608700 85613977 - MGP_NODShiLtJ_P0030733 Nek8 protein_coding protein_coding MGP_NODShiLtJ_T0028941.1 MGP_NODShiLtJ_G0018176.1 mouse_genomes_project 11 60011172 60067555 - MGP_NODShiLtJ_P0028941 Anxa6 protein_coding protein_coding MGP_NODShiLtJ_T0028942.1 MGP_NODShiLtJ_G0018176.1 mouse_genomes_project 11 60011172 60067555 - MGP_NODShiLtJ_P0028942 Anxa6 protein_coding protein_coding MGP_NODShiLtJ_T0028943.1 MGP_NODShiLtJ_G0018176.1 mouse_genomes_project 11 60024782 60067525 - Anxa6 protein_coding processed_transcript MGP_NODShiLtJ_T0012593.1 MGP_NODShiLtJ_G0010701.1 mouse_genomes_project 11 99461163 99462745 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003252.1 MGP_NODShiLtJ_G0002999.1 mouse_genomes_project 11 112365892 112366578 - Gm11586 antisense antisense MGP_NODShiLtJ_T0012655.1 MGP_NODShiLtJ_G0010763.1 mouse_genomes_project 11 126477776 126478231 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012566.1 MGP_NODShiLtJ_G0010674.1 mouse_genomes_project 11 87425097 87425838 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032943.1 MGP_NODShiLtJ_G0019179.1 mouse_genomes_project 11 119180260 119237085 + MGP_NODShiLtJ_P0032943 Apoh protein_coding protein_coding MGP_NODShiLtJ_T0032944.1 MGP_NODShiLtJ_G0019179.1 mouse_genomes_project 11 119220185 119237030 + MGP_NODShiLtJ_P0032944 Apoh protein_coding protein_coding MGP_NODShiLtJ_T0032945.1 MGP_NODShiLtJ_G0019179.1 mouse_genomes_project 11 119220190 119244520 + MGP_NODShiLtJ_P0032945 Apoh protein_coding protein_coding MGP_NODShiLtJ_T0032946.1 MGP_NODShiLtJ_G0019179.1 mouse_genomes_project 11 119236472 119251040 + MGP_NODShiLtJ_P0032946 Apoh protein_coding protein_coding MGP_NODShiLtJ_T0101553.1 MGP_NODShiLtJ_G0039723.1 mouse_genomes_project 11 80805110 80805151 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0031583.1 MGP_NODShiLtJ_G0018831.1 mouse_genomes_project 11 104745358 104790955 + MGP_NODShiLtJ_P0031583 Fam117a protein_coding protein_coding MGP_NODShiLtJ_T0031584.1 MGP_NODShiLtJ_G0018831.1 mouse_genomes_project 11 104745360 104784166 + Fam117a protein_coding processed_transcript MGP_NODShiLtJ_T0031585.1 MGP_NODShiLtJ_G0018831.1 mouse_genomes_project 11 104748319 104784715 + Fam117a protein_coding processed_transcript MGP_NODShiLtJ_T0031586.1 MGP_NODShiLtJ_G0018831.1 mouse_genomes_project 11 104748321 104772399 + Fam117a protein_coding processed_transcript MGP_NODShiLtJ_T0031587.1 MGP_NODShiLtJ_G0018831.1 mouse_genomes_project 11 104748350 104784170 + Fam117a protein_coding processed_transcript MGP_NODShiLtJ_T0031588.1 MGP_NODShiLtJ_G0018831.1 mouse_genomes_project 11 104784549 104786668 + Fam117a protein_coding processed_transcript MGP_NODShiLtJ_T0006178.1 MGP_NODShiLtJ_G0005158.1 mouse_genomes_project 11 62807675 62810761 + lincRNA lincRNA MGP_NODShiLtJ_T0033868.1 MGP_NODShiLtJ_G0019367.1 mouse_genomes_project 11 132692318 132706210 - MGP_NODShiLtJ_P0033868 P4hb protein_coding protein_coding MGP_NODShiLtJ_T0033869.1 MGP_NODShiLtJ_G0019367.1 mouse_genomes_project 11 132692325 132693257 - P4hb protein_coding processed_transcript MGP_NODShiLtJ_T0033870.1 MGP_NODShiLtJ_G0019367.1 mouse_genomes_project 11 132692965 132705798 - MGP_NODShiLtJ_P0033870 P4hb protein_coding protein_coding MGP_NODShiLtJ_T0006250.1 MGP_NODShiLtJ_G0005211.1 mouse_genomes_project 11 97759861 97769199 + Gm2018 lincRNA lincRNA MGP_NODShiLtJ_T0028481.1 MGP_NODShiLtJ_G0018056.1 mouse_genomes_project 11 50833525 50870356 + MGP_NODShiLtJ_P0028481 Timd4 protein_coding protein_coding MGP_NODShiLtJ_T0029700.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75667645 75668649 - Cntrob protein_coding retained_intron MGP_NODShiLtJ_T0029701.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75667645 75692300 - MGP_NODShiLtJ_P0029701 Cntrob protein_coding protein_coding MGP_NODShiLtJ_T0029702.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75667645 75692300 - MGP_NODShiLtJ_P0029702 Cntrob protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029703.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75667698 75687834 - MGP_NODShiLtJ_P0029703 Cntrob protein_coding protein_coding MGP_NODShiLtJ_T0029704.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75667859 75671301 - MGP_NODShiLtJ_P0029704 Cntrob protein_coding protein_coding MGP_NODShiLtJ_T0029705.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75669675 75673118 - Cntrob protein_coding retained_intron MGP_NODShiLtJ_T0029706.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75676551 75677580 - MGP_NODShiLtJ_P0029706 Cntrob protein_coding protein_coding MGP_NODShiLtJ_T0029707.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75678181 75683266 - Cntrob protein_coding retained_intron MGP_NODShiLtJ_T0029708.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75682904 75688599 - Cntrob protein_coding retained_intron MGP_NODShiLtJ_T0029709.1 MGP_NODShiLtJ_G0018374.1 mouse_genomes_project 11 75683320 75687852 - Cntrob protein_coding retained_intron MGP_NODShiLtJ_T0028561.1 MGP_NODShiLtJ_G0018082.1 mouse_genomes_project 11 53880413 53881349 + MGP_NODShiLtJ_P0028561 Olfr1387 protein_coding protein_coding MGP_NODShiLtJ_T0017162.1 MGP_NODShiLtJ_G0015092.1 mouse_genomes_project 11 130471062 130474128 - Gm11748 processed_transcript processed_transcript MGP_NODShiLtJ_T0027921.1 MGP_NODShiLtJ_G0017918.1 mouse_genomes_project 11 18285748 18431031 - MGP_NODShiLtJ_P0027921 Meis1 protein_coding protein_coding MGP_NODShiLtJ_T0027922.1 MGP_NODShiLtJ_G0017918.1 mouse_genomes_project 11 18286360 18431015 - MGP_NODShiLtJ_P0027922 Meis1 protein_coding protein_coding MGP_NODShiLtJ_T0027923.1 MGP_NODShiLtJ_G0017918.1 mouse_genomes_project 11 18286360 18430760 - MGP_NODShiLtJ_P0027923 Meis1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027924.1 MGP_NODShiLtJ_G0017918.1 mouse_genomes_project 11 18286599 18424086 - Meis1 protein_coding processed_transcript MGP_NODShiLtJ_T0027925.1 MGP_NODShiLtJ_G0017918.1 mouse_genomes_project 11 18286600 18430278 - MGP_NODShiLtJ_P0027925 Meis1 protein_coding protein_coding MGP_NODShiLtJ_T0027926.1 MGP_NODShiLtJ_G0017918.1 mouse_genomes_project 11 18287275 18428335 - MGP_NODShiLtJ_P0027926 Meis1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027927.1 MGP_NODShiLtJ_G0017918.1 mouse_genomes_project 11 18398898 18430968 - Meis1 protein_coding retained_intron MGP_NODShiLtJ_T0027928.1 MGP_NODShiLtJ_G0017918.1 mouse_genomes_project 11 18421867 18430968 - Meis1 protein_coding retained_intron MGP_NODShiLtJ_T0030363.1 MGP_NODShiLtJ_G0018529.1 mouse_genomes_project 11 80921991 80928918 - MGP_NODShiLtJ_P0030363 Olfr398 protein_coding protein_coding MGP_NODShiLtJ_T0030364.1 MGP_NODShiLtJ_G0018529.1 mouse_genomes_project 11 80921991 80922936 - MGP_NODShiLtJ_P0030364 Olfr398 protein_coding protein_coding MGP_NODShiLtJ_T0033139.1 MGP_NODShiLtJ_G0019224.1 mouse_genomes_project 11 126627810 126641007 - MGP_NODShiLtJ_P0033139 protein_coding protein_coding MGP_NODShiLtJ_T0028171.1 MGP_NODShiLtJ_G0017970.1 mouse_genomes_project 11 31956097 32003276 - MGP_NODShiLtJ_P0028171 4930505A04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028172.1 MGP_NODShiLtJ_G0017970.1 mouse_genomes_project 11 31956097 32003257 - MGP_NODShiLtJ_P0028172 4930505A04Rik protein_coding protein_coding MGP_NODShiLtJ_T0009643.1 MGP_NODShiLtJ_G0007776.1 mouse_genomes_project 11 105814010 105814112 + Mir196a-1 miRNA miRNA MGP_NODShiLtJ_T0012374.1 MGP_NODShiLtJ_G0010482.1 mouse_genomes_project 11 15728349 15730369 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028313.1 MGP_NODShiLtJ_G0018011.1 mouse_genomes_project 11 37628150 37652580 + MGP_NODShiLtJ_P0028313 Pank3 protein_coding protein_coding MGP_NODShiLtJ_T0017096.1 MGP_NODShiLtJ_G0015060.1 mouse_genomes_project 11 91148666 91151642 + AA465934 processed_transcript antisense MGP_NODShiLtJ_T0017097.1 MGP_NODShiLtJ_G0015060.1 mouse_genomes_project 11 91148687 91151643 + AA465934 processed_transcript antisense MGP_NODShiLtJ_T0017098.1 MGP_NODShiLtJ_G0015060.1 mouse_genomes_project 11 91148695 91149313 + AA465934 processed_transcript retained_intron MGP_NODShiLtJ_T0017099.1 MGP_NODShiLtJ_G0015060.1 mouse_genomes_project 11 91148709 91151640 + AA465934 processed_transcript antisense MGP_NODShiLtJ_T0017100.1 MGP_NODShiLtJ_G0015060.1 mouse_genomes_project 11 91148710 91151641 + AA465934 processed_transcript retained_intron MGP_NODShiLtJ_T0097886.1 MGP_NODShiLtJ_G0036298.1 mouse_genomes_project 11 3432807 3432921 + n-R5s67 rRNA rRNA MGP_NODShiLtJ_T0029923.1 MGP_NODShiLtJ_G0018422.1 mouse_genomes_project 11 76444785 76454421 + MGP_NODShiLtJ_P0029923 Ctdnep1 protein_coding protein_coding MGP_NODShiLtJ_T0029924.1 MGP_NODShiLtJ_G0018422.1 mouse_genomes_project 11 76447555 76453932 + Ctdnep1 protein_coding retained_intron MGP_NODShiLtJ_T0029925.1 MGP_NODShiLtJ_G0018422.1 mouse_genomes_project 11 76453454 76454541 + Ctdnep1 protein_coding retained_intron MGP_NODShiLtJ_T0029926.1 MGP_NODShiLtJ_G0018422.1 mouse_genomes_project 11 76453474 76454786 + Ctdnep1 protein_coding processed_transcript MGP_NODShiLtJ_T0012376.1 MGP_NODShiLtJ_G0010484.1 mouse_genomes_project 11 16282849 16287078 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003256.1 MGP_NODShiLtJ_G0003003.1 mouse_genomes_project 11 113667384 113672778 + Arhgap27os2 antisense antisense MGP_NODShiLtJ_T0012571.1 MGP_NODShiLtJ_G0010679.1 mouse_genomes_project 11 90468534 90468828 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031779.1 MGP_NODShiLtJ_G0018882.1 mouse_genomes_project 11 107125228 107134571 - MGP_NODShiLtJ_P0031779 4933428G20Rik protein_coding protein_coding MGP_NODShiLtJ_T0030760.1 MGP_NODShiLtJ_G0018620.1 mouse_genomes_project 11 85707682 85709964 + protein_coding processed_transcript MGP_NODShiLtJ_T0030761.1 MGP_NODShiLtJ_G0018620.1 mouse_genomes_project 11 85707690 85737125 + MGP_NODShiLtJ_P0030761 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030762.1 MGP_NODShiLtJ_G0018620.1 mouse_genomes_project 11 85708403 85709898 + protein_coding retained_intron MGP_NODShiLtJ_T0030763.1 MGP_NODShiLtJ_G0018620.1 mouse_genomes_project 11 85712064 85714112 + protein_coding retained_intron MGP_NODShiLtJ_T0030764.1 MGP_NODShiLtJ_G0018620.1 mouse_genomes_project 11 85717906 85719360 + protein_coding retained_intron MGP_NODShiLtJ_T0030765.1 MGP_NODShiLtJ_G0018620.1 mouse_genomes_project 11 85719086 85720823 + MGP_NODShiLtJ_P0030765 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030766.1 MGP_NODShiLtJ_G0018620.1 mouse_genomes_project 11 85731346 85735138 + protein_coding retained_intron MGP_NODShiLtJ_T0030767.1 MGP_NODShiLtJ_G0018620.1 mouse_genomes_project 11 85735094 85736852 + protein_coding retained_intron MGP_NODShiLtJ_T0031041.1 MGP_NODShiLtJ_G0018698.1 mouse_genomes_project 11 91303687 91327156 - MGP_NODShiLtJ_P0031041 Mmp28 protein_coding protein_coding MGP_NODShiLtJ_T0031042.1 MGP_NODShiLtJ_G0018698.1 mouse_genomes_project 11 91304795 91327095 - MGP_NODShiLtJ_P0031042 Mmp28 protein_coding protein_coding MGP_NODShiLtJ_T0031043.1 MGP_NODShiLtJ_G0018698.1 mouse_genomes_project 11 91304795 91327205 - MGP_NODShiLtJ_P0031043 Mmp28 protein_coding protein_coding MGP_NODShiLtJ_T0031044.1 MGP_NODShiLtJ_G0018698.1 mouse_genomes_project 11 91305980 91327126 - MGP_NODShiLtJ_P0031044 Mmp28 protein_coding protein_coding MGP_NODShiLtJ_T0031045.1 MGP_NODShiLtJ_G0018698.1 mouse_genomes_project 11 91314305 91327205 - Mmp28 protein_coding processed_transcript MGP_NODShiLtJ_T0012357.1 MGP_NODShiLtJ_G0010465.1 mouse_genomes_project 11 4142855 4143621 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028422.1 MGP_NODShiLtJ_G0018038.1 mouse_genomes_project 11 48475656 48889732 + MGP_NODShiLtJ_P0028422 Ebf1 protein_coding protein_coding MGP_NODShiLtJ_T0028423.1 MGP_NODShiLtJ_G0018038.1 mouse_genomes_project 11 48475656 48890266 + MGP_NODShiLtJ_P0028423 Ebf1 protein_coding protein_coding MGP_NODShiLtJ_T0028424.1 MGP_NODShiLtJ_G0018038.1 mouse_genomes_project 11 48475656 48892849 + MGP_NODShiLtJ_P0028424 Ebf1 protein_coding protein_coding MGP_NODShiLtJ_T0028425.1 MGP_NODShiLtJ_G0018038.1 mouse_genomes_project 11 48477237 48505996 + Ebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0028426.1 MGP_NODShiLtJ_G0018038.1 mouse_genomes_project 11 48477300 48502619 + Ebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0028427.1 MGP_NODShiLtJ_G0018038.1 mouse_genomes_project 11 48480912 48502609 + Ebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0028428.1 MGP_NODShiLtJ_G0018038.1 mouse_genomes_project 11 48791550 48855663 + Ebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0030303.1 MGP_NODShiLtJ_G0018500.1 mouse_genomes_project 11 79924916 79927724 - MGP_NODShiLtJ_P0030303 Gsg2 protein_coding protein_coding MGP_NODShiLtJ_T0029771.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76063637 76069599 - MGP_NODShiLtJ_P0029771 Mpdu1 protein_coding protein_coding MGP_NODShiLtJ_T0029772.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76063901 76069521 - MGP_NODShiLtJ_P0029772 Mpdu1 protein_coding protein_coding MGP_NODShiLtJ_T0029773.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76063967 76069544 - MGP_NODShiLtJ_P0029773 Mpdu1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029774.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76064069 76065221 - Mpdu1 protein_coding retained_intron MGP_NODShiLtJ_T0029775.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76064094 76069544 - MGP_NODShiLtJ_P0029775 Mpdu1 protein_coding protein_coding MGP_NODShiLtJ_T0029776.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76064102 76069475 - MGP_NODShiLtJ_P0029776 Mpdu1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029777.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76064153 76065194 - Mpdu1 protein_coding retained_intron MGP_NODShiLtJ_T0029778.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76064673 76069461 - Mpdu1 protein_coding retained_intron MGP_NODShiLtJ_T0029779.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76065287 76069517 - Mpdu1 protein_coding retained_intron MGP_NODShiLtJ_T0029780.1 MGP_NODShiLtJ_G0018392.1 mouse_genomes_project 11 76065416 76066346 - Mpdu1 protein_coding retained_intron MGP_NODShiLtJ_T0003099.1 MGP_NODShiLtJ_G0002874.1 mouse_genomes_project 11 50096032 50099375 - Gm16033 antisense antisense MGP_NODShiLtJ_T0031659.1 MGP_NODShiLtJ_G0018856.1 mouse_genomes_project 11 105869806 105873174 + MGP_NODShiLtJ_P0031659 Hoxb4 protein_coding protein_coding MGP_NODShiLtJ_T0029055.1 MGP_NODShiLtJ_G0018225.1 mouse_genomes_project 11 64209942 64214003 + MGP_NODShiLtJ_P0029055 Olfr314 protein_coding protein_coding MGP_NODShiLtJ_T0029056.1 MGP_NODShiLtJ_G0018225.1 mouse_genomes_project 11 64213121 64214252 + MGP_NODShiLtJ_P0029056 Olfr314 protein_coding protein_coding MGP_NODShiLtJ_T0017136.1 MGP_NODShiLtJ_G0015083.1 mouse_genomes_project 11 114970916 114979653 - Gm22000 processed_transcript processed_transcript MGP_NODShiLtJ_T0012504.1 MGP_NODShiLtJ_G0010612.1 mouse_genomes_project 11 64078256 64079271 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098666.1 MGP_NODShiLtJ_G0037060.1 mouse_genomes_project 11 14374015 14374122 + Gm24707 snRNA snRNA MGP_NODShiLtJ_T0033969.1 MGP_NODShiLtJ_G0019385.1 mouse_genomes_project 11 132930986 132933055 + Gps1 protein_coding retained_intron MGP_NODShiLtJ_T0033970.1 MGP_NODShiLtJ_G0019385.1 mouse_genomes_project 11 132930989 132938164 + MGP_NODShiLtJ_P0033970 Gps1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033971.1 MGP_NODShiLtJ_G0019385.1 mouse_genomes_project 11 132932504 132938478 + MGP_NODShiLtJ_P0033971 Gps1 protein_coding protein_coding MGP_NODShiLtJ_T0033972.1 MGP_NODShiLtJ_G0019385.1 mouse_genomes_project 11 132932504 132938483 + MGP_NODShiLtJ_P0033972 Gps1 protein_coding protein_coding MGP_NODShiLtJ_T0033973.1 MGP_NODShiLtJ_G0019385.1 mouse_genomes_project 11 132935269 132936259 + Gps1 protein_coding retained_intron MGP_NODShiLtJ_T0027594.1 MGP_NODShiLtJ_G0017844.1 mouse_genomes_project 11 1690719 1729215 + MGP_NODShiLtJ_P0027594 Zmat5 protein_coding protein_coding MGP_NODShiLtJ_T0027595.1 MGP_NODShiLtJ_G0017844.1 mouse_genomes_project 11 1690749 1728941 + Zmat5 protein_coding processed_transcript MGP_NODShiLtJ_T0027596.1 MGP_NODShiLtJ_G0017844.1 mouse_genomes_project 11 1719383 1723324 + Zmat5 protein_coding processed_transcript MGP_NODShiLtJ_T0029031.1 MGP_NODShiLtJ_G0018207.1 mouse_genomes_project 11 63803357 63815445 - MGP_NODShiLtJ_P0029031 4930504O13Rik protein_coding protein_coding MGP_NODShiLtJ_T0034056.1 MGP_NODShiLtJ_G0019404.1 mouse_genomes_project 11 133623377 133634857 + MGP_NODShiLtJ_P0034056 Fn3krp protein_coding protein_coding MGP_NODShiLtJ_T0012572.1 MGP_NODShiLtJ_G0010680.1 mouse_genomes_project 11 90471391 90472494 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098672.1 MGP_NODShiLtJ_G0037066.1 mouse_genomes_project 11 23937285 23937430 - Gm23827 snRNA snRNA MGP_NODShiLtJ_T0031521.1 MGP_NODShiLtJ_G0018814.1 mouse_genomes_project 11 103917893 103928469 - MGP_NODShiLtJ_P0031521 Eme1 protein_coding protein_coding MGP_NODShiLtJ_T0031522.1 MGP_NODShiLtJ_G0018814.1 mouse_genomes_project 11 103920629 103923397 - Eme1 protein_coding processed_transcript MGP_NODShiLtJ_T0031523.1 MGP_NODShiLtJ_G0018814.1 mouse_genomes_project 11 103922760 103923572 - Eme1 protein_coding processed_transcript MGP_NODShiLtJ_T0031524.1 MGP_NODShiLtJ_G0018814.1 mouse_genomes_project 11 103923441 103928176 - Eme1 protein_coding processed_transcript MGP_NODShiLtJ_T0029910.1 MGP_NODShiLtJ_G0018420.1 mouse_genomes_project 11 76426223 76428369 + MGP_NODShiLtJ_P0029910 Cldn7 protein_coding protein_coding MGP_NODShiLtJ_T0029911.1 MGP_NODShiLtJ_G0018420.1 mouse_genomes_project 11 76426859 76429289 + MGP_NODShiLtJ_P0029911 Cldn7 protein_coding protein_coding MGP_NODShiLtJ_T0029912.1 MGP_NODShiLtJ_G0018420.1 mouse_genomes_project 11 76428317 76429052 + MGP_NODShiLtJ_P0029912 Cldn7 protein_coding protein_coding MGP_NODShiLtJ_T0003249.1 MGP_NODShiLtJ_G0002996.1 mouse_genomes_project 11 112157793 112165948 + 4930417O22Rik antisense antisense MGP_NODShiLtJ_T0003124.1 MGP_NODShiLtJ_G0002897.1 mouse_genomes_project 11 62898831 62901385 - 4933426K07Rik antisense antisense MGP_NODShiLtJ_T0029353.1 MGP_NODShiLtJ_G0018296.1 mouse_genomes_project 11 67370462 67373230 + Fam83g protein_coding processed_transcript MGP_NODShiLtJ_T0029354.1 MGP_NODShiLtJ_G0018296.1 mouse_genomes_project 11 67370790 67396260 + MGP_NODShiLtJ_P0029354 Fam83g protein_coding protein_coding MGP_NODShiLtJ_T0012564.1 MGP_NODShiLtJ_G0010672.1 mouse_genomes_project 11 86868677 86869651 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012608.1 MGP_NODShiLtJ_G0010716.1 mouse_genomes_project 11 106691858 106692252 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099919.1 MGP_NODShiLtJ_G0038313.1 mouse_genomes_project 11 49564310 49564442 + Gm22284 snoRNA snoRNA MGP_NODShiLtJ_T0003183.1 MGP_NODShiLtJ_G0002947.1 mouse_genomes_project 11 87183679 87189776 - Rab11fip4os2 antisense antisense MGP_NODShiLtJ_T0003184.1 MGP_NODShiLtJ_G0002947.1 mouse_genomes_project 11 87188559 87189821 - Rab11fip4os2 antisense antisense MGP_NODShiLtJ_T0028682.1 MGP_NODShiLtJ_G0018115.1 mouse_genomes_project 11 55642896 55657456 + MGP_NODShiLtJ_P0028682 Zfp354a protein_coding protein_coding MGP_NODShiLtJ_T0028683.1 MGP_NODShiLtJ_G0018115.1 mouse_genomes_project 11 55642898 55643710 + Zfp354a protein_coding processed_transcript MGP_NODShiLtJ_T0028684.1 MGP_NODShiLtJ_G0018115.1 mouse_genomes_project 11 55642932 55658894 + MGP_NODShiLtJ_P0028684 Zfp354a protein_coding protein_coding MGP_NODShiLtJ_T0031478.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031478 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031479.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031479 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031480.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031480 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031481.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031481 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031482.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031482 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031483.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031483 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031484.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031484 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031485.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031485 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031486.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664544 103735656 - MGP_NODShiLtJ_P0031486 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031487.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664559 103735694 - MGP_NODShiLtJ_P0031487 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031488.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103664788 103735656 - MGP_NODShiLtJ_P0031488 Cacna1g protein_coding protein_coding MGP_NODShiLtJ_T0031489.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103666005 103667842 - Cacna1g protein_coding processed_transcript MGP_NODShiLtJ_T0031490.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103667643 103673352 - Cacna1g protein_coding processed_transcript MGP_NODShiLtJ_T0031491.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103674976 103680474 - Cacna1g protein_coding processed_transcript MGP_NODShiLtJ_T0031492.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103681242 103682465 - Cacna1g protein_coding processed_transcript MGP_NODShiLtJ_T0031493.1 MGP_NODShiLtJ_G0018806.1 mouse_genomes_project 11 103682954 103735197 - Cacna1g protein_coding processed_transcript MGP_NODShiLtJ_T0101274.1 MGP_NODShiLtJ_G0039550.1 mouse_genomes_project 11 81249447 81265577 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101275.1 MGP_NODShiLtJ_G0039550.1 mouse_genomes_project 11 81249922 81250858 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0029514.1 MGP_NODShiLtJ_G0018331.1 mouse_genomes_project 11 73096176 73114260 + MGP_NODShiLtJ_P0029514 Pirt protein_coding protein_coding MGP_NODShiLtJ_T0012640.1 MGP_NODShiLtJ_G0010748.1 mouse_genomes_project 11 117697209 117698041 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032040.1 MGP_NODShiLtJ_G0018960.1 mouse_genomes_project 11 109510864 109512411 - MGP_NODShiLtJ_P0032040 protein_coding protein_coding MGP_NODShiLtJ_T0009580.1 MGP_NODShiLtJ_G0007713.1 mouse_genomes_project 11 50126917 50126974 + Mir7239 miRNA miRNA MGP_NODShiLtJ_T0011682.1 MGP_NODShiLtJ_G0009813.1 mouse_genomes_project 11 65134889 65136149 + MGP_NODShiLtJ_P0011682 Olfr225 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0017126.1 MGP_NODShiLtJ_G0015074.1 mouse_genomes_project 11 107718669 107722460 + Gm11629 processed_transcript processed_transcript MGP_NODShiLtJ_T0032475.1 MGP_NODShiLtJ_G0019080.1 mouse_genomes_project 11 112473222 112489425 + MGP_NODShiLtJ_P0032475 BC030867 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032476.1 MGP_NODShiLtJ_G0019080.1 mouse_genomes_project 11 112473222 112489425 + MGP_NODShiLtJ_P0032476 BC030867 protein_coding protein_coding MGP_NODShiLtJ_T0032477.1 MGP_NODShiLtJ_G0019080.1 mouse_genomes_project 11 112479944 112484905 + BC030867 protein_coding processed_transcript MGP_NODShiLtJ_T0032478.1 MGP_NODShiLtJ_G0019080.1 mouse_genomes_project 11 112479948 112484903 + BC030867 protein_coding processed_transcript MGP_NODShiLtJ_T0032479.1 MGP_NODShiLtJ_G0019080.1 mouse_genomes_project 11 112486250 112489425 + BC030867 protein_coding processed_transcript MGP_NODShiLtJ_T0031053.1 MGP_NODShiLtJ_G0018702.1 mouse_genomes_project 11 91453498 91459216 - MGP_NODShiLtJ_P0031053 Ccl9 protein_coding protein_coding MGP_NODShiLtJ_T0031054.1 MGP_NODShiLtJ_G0018702.1 mouse_genomes_project 11 91455897 91457722 - Ccl9 protein_coding processed_transcript MGP_NODShiLtJ_T0033132.1 MGP_NODShiLtJ_G0019220.1 mouse_genomes_project 11 126534696 126558019 - Cd300c protein_coding processed_transcript MGP_NODShiLtJ_T0033133.1 MGP_NODShiLtJ_G0019220.1 mouse_genomes_project 11 126534848 126543185 - MGP_NODShiLtJ_P0033133 Cd300c protein_coding protein_coding MGP_NODShiLtJ_T0033134.1 MGP_NODShiLtJ_G0019220.1 mouse_genomes_project 11 126534858 126543185 - MGP_NODShiLtJ_P0033134 Cd300c protein_coding protein_coding MGP_NODShiLtJ_T0032141.1 MGP_NODShiLtJ_G0019013.1 mouse_genomes_project 11 110588609 110595434 + MGP_NODShiLtJ_P0032141 Cnp protein_coding protein_coding MGP_NODShiLtJ_T0032142.1 MGP_NODShiLtJ_G0019013.1 mouse_genomes_project 11 110588817 110590156 + Cnp protein_coding processed_transcript MGP_NODShiLtJ_T0032143.1 MGP_NODShiLtJ_G0019013.1 mouse_genomes_project 11 110589229 110595434 + Cnp protein_coding processed_transcript MGP_NODShiLtJ_T0032144.1 MGP_NODShiLtJ_G0019013.1 mouse_genomes_project 11 110589596 110605387 + Cnp protein_coding processed_transcript MGP_NODShiLtJ_T0009681.1 MGP_NODShiLtJ_G0007814.1 mouse_genomes_project 11 132096096 132096194 - Mir338 miRNA miRNA MGP_NODShiLtJ_T0098699.1 MGP_NODShiLtJ_G0037093.1 mouse_genomes_project 11 84251367 84251517 + Gm22611 snRNA snRNA MGP_NODShiLtJ_T0012482.1 MGP_NODShiLtJ_G0010590.1 mouse_genomes_project 11 58387663 58388239 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098692.1 MGP_NODShiLtJ_G0037086.1 mouse_genomes_project 11 75604412 75604517 + Gm23194 snRNA snRNA MGP_NODShiLtJ_T0030362.1 MGP_NODShiLtJ_G0018528.1 mouse_genomes_project 11 80892242 80893333 + MGP_NODShiLtJ_P0030362 Olfr397 protein_coding protein_coding MGP_NODShiLtJ_T0012497.1 MGP_NODShiLtJ_G0010605.1 mouse_genomes_project 11 62666493 62667231 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028770.1 MGP_NODShiLtJ_G0018135.1 mouse_genomes_project 11 56986252 57016470 - MGP_NODShiLtJ_P0028770 Tcf7 protein_coding protein_coding MGP_NODShiLtJ_T0028771.1 MGP_NODShiLtJ_G0018135.1 mouse_genomes_project 11 56987117 57016913 - MGP_NODShiLtJ_P0028771 Tcf7 protein_coding protein_coding MGP_NODShiLtJ_T0029466.1 MGP_NODShiLtJ_G0018317.1 mouse_genomes_project 11 68901923 68942078 + MGP_NODShiLtJ_P0029466 Tekt3 protein_coding protein_coding MGP_NODShiLtJ_T0029349.1 MGP_NODShiLtJ_G0018295.1 mouse_genomes_project 11 67359167 67407140 - Slc5a10 protein_coding processed_transcript MGP_NODShiLtJ_T0029350.1 MGP_NODShiLtJ_G0018295.1 mouse_genomes_project 11 67359168 67406260 - MGP_NODShiLtJ_P0029350 Slc5a10 protein_coding protein_coding MGP_NODShiLtJ_T0029351.1 MGP_NODShiLtJ_G0018295.1 mouse_genomes_project 11 67359168 67407113 - MGP_NODShiLtJ_P0029351 Slc5a10 protein_coding protein_coding MGP_NODShiLtJ_T0029352.1 MGP_NODShiLtJ_G0018295.1 mouse_genomes_project 11 67359178 67406311 - MGP_NODShiLtJ_P0029352 Slc5a10 protein_coding protein_coding MGP_NODShiLtJ_T0027671.1 MGP_NODShiLtJ_G0017856.1 mouse_genomes_project 11 2218401 2290259 - MGP_NODShiLtJ_P0027671 Kremen1 protein_coding protein_coding MGP_NODShiLtJ_T0027672.1 MGP_NODShiLtJ_G0017856.1 mouse_genomes_project 11 2231489 2267188 - MGP_NODShiLtJ_P0027672 Kremen1 protein_coding protein_coding MGP_NODShiLtJ_T0033719.1 MGP_NODShiLtJ_G0019338.1 mouse_genomes_project 11 131397806 131425647 + MGP_NODShiLtJ_P0033719 Slc26a11 protein_coding protein_coding MGP_NODShiLtJ_T0033720.1 MGP_NODShiLtJ_G0019338.1 mouse_genomes_project 11 131397837 131405716 + Slc26a11 protein_coding processed_transcript MGP_NODShiLtJ_T0033721.1 MGP_NODShiLtJ_G0019338.1 mouse_genomes_project 11 131397842 131415581 + Slc26a11 protein_coding processed_transcript MGP_NODShiLtJ_T0033722.1 MGP_NODShiLtJ_G0019338.1 mouse_genomes_project 11 131406109 131425617 + Slc26a11 protein_coding processed_transcript MGP_NODShiLtJ_T0033302.1 MGP_NODShiLtJ_G0019258.1 mouse_genomes_project 11 127545519 127554718 + MGP_NODShiLtJ_P0033302 Tsen54 protein_coding protein_coding MGP_NODShiLtJ_T0033303.1 MGP_NODShiLtJ_G0019258.1 mouse_genomes_project 11 127545519 127554718 + MGP_NODShiLtJ_P0033303 Tsen54 protein_coding protein_coding MGP_NODShiLtJ_T0033304.1 MGP_NODShiLtJ_G0019258.1 mouse_genomes_project 11 127545541 127546341 + Tsen54 protein_coding retained_intron MGP_NODShiLtJ_T0033305.1 MGP_NODShiLtJ_G0019258.1 mouse_genomes_project 11 127545566 127552148 + Tsen54 protein_coding retained_intron MGP_NODShiLtJ_T0033306.1 MGP_NODShiLtJ_G0019258.1 mouse_genomes_project 11 127545600 127552127 + Tsen54 protein_coding retained_intron MGP_NODShiLtJ_T0033307.1 MGP_NODShiLtJ_G0019258.1 mouse_genomes_project 11 127546493 127553319 + MGP_NODShiLtJ_P0033307 Tsen54 protein_coding protein_coding MGP_NODShiLtJ_T0033308.1 MGP_NODShiLtJ_G0019258.1 mouse_genomes_project 11 127552329 127554713 + MGP_NODShiLtJ_P0033308 Tsen54 protein_coding protein_coding MGP_NODShiLtJ_T0033309.1 MGP_NODShiLtJ_G0019258.1 mouse_genomes_project 11 127552465 127553896 + MGP_NODShiLtJ_P0033309 Tsen54 protein_coding protein_coding MGP_NODShiLtJ_T0027663.1 MGP_NODShiLtJ_G0017855.1 mouse_genomes_project 11 2126125 2174809 - MGP_NODShiLtJ_P0027663 Emid1 protein_coding protein_coding MGP_NODShiLtJ_T0027664.1 MGP_NODShiLtJ_G0017855.1 mouse_genomes_project 11 2126125 2153428 - MGP_NODShiLtJ_P0027664 Emid1 protein_coding protein_coding MGP_NODShiLtJ_T0027665.1 MGP_NODShiLtJ_G0017855.1 mouse_genomes_project 11 2126126 2174792 - MGP_NODShiLtJ_P0027665 Emid1 protein_coding protein_coding MGP_NODShiLtJ_T0027666.1 MGP_NODShiLtJ_G0017855.1 mouse_genomes_project 11 2126131 2152306 - MGP_NODShiLtJ_P0027666 Emid1 protein_coding protein_coding MGP_NODShiLtJ_T0027667.1 MGP_NODShiLtJ_G0017855.1 mouse_genomes_project 11 2126505 2151892 - Emid1 protein_coding retained_intron MGP_NODShiLtJ_T0027668.1 MGP_NODShiLtJ_G0017855.1 mouse_genomes_project 11 2126767 2151713 - MGP_NODShiLtJ_P0027668 Emid1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027669.1 MGP_NODShiLtJ_G0017855.1 mouse_genomes_project 11 2154624 2174789 - MGP_NODShiLtJ_P0027669 Emid1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027670.1 MGP_NODShiLtJ_G0017855.1 mouse_genomes_project 11 2158056 2172836 - Emid1 protein_coding processed_transcript MGP_NODShiLtJ_T0031421.1 MGP_NODShiLtJ_G0018794.1 mouse_genomes_project 11 103043044 103071823 - Utp18 protein_coding processed_transcript MGP_NODShiLtJ_T0031422.1 MGP_NODShiLtJ_G0018794.1 mouse_genomes_project 11 103043044 103071823 - MGP_NODShiLtJ_P0031422 Utp18 protein_coding protein_coding MGP_NODShiLtJ_T0031423.1 MGP_NODShiLtJ_G0018794.1 mouse_genomes_project 11 103060751 103061512 - Utp18 protein_coding processed_transcript MGP_NODShiLtJ_T0003195.1 MGP_NODShiLtJ_G0002956.1 mouse_genomes_project 11 93797544 93814036 - Bcas3os1 antisense antisense MGP_NODShiLtJ_T0003196.1 MGP_NODShiLtJ_G0002956.1 mouse_genomes_project 11 93798698 93814036 - Bcas3os1 antisense antisense MGP_NODShiLtJ_T0029927.1 MGP_NODShiLtJ_G0018423.1 mouse_genomes_project 11 76455526 76460722 + MGP_NODShiLtJ_P0029927 Gabarap protein_coding protein_coding MGP_NODShiLtJ_T0029928.1 MGP_NODShiLtJ_G0018423.1 mouse_genomes_project 11 76456022 76460711 + MGP_NODShiLtJ_P0029928 Gabarap protein_coding protein_coding MGP_NODShiLtJ_T0029929.1 MGP_NODShiLtJ_G0018423.1 mouse_genomes_project 11 76456067 76460706 + Gabarap protein_coding retained_intron MGP_NODShiLtJ_T0029930.1 MGP_NODShiLtJ_G0018423.1 mouse_genomes_project 11 76456190 76456985 + Gabarap protein_coding processed_transcript MGP_NODShiLtJ_T0009664.1 MGP_NODShiLtJ_G0007797.1 mouse_genomes_project 11 114624476 114624547 - miRNA miRNA MGP_NODShiLtJ_T0030031.1 MGP_NODShiLtJ_G0018443.1 mouse_genomes_project 11 76987712 76989035 + MGP_NODShiLtJ_P0030031 Med11 protein_coding protein_coding MGP_NODShiLtJ_T0030032.1 MGP_NODShiLtJ_G0018443.1 mouse_genomes_project 11 76987712 76989522 + MGP_NODShiLtJ_P0030032 Med11 protein_coding protein_coding MGP_NODShiLtJ_T0030033.1 MGP_NODShiLtJ_G0018443.1 mouse_genomes_project 11 76987725 76989359 + Med11 protein_coding retained_intron MGP_NODShiLtJ_T0099947.1 MGP_NODShiLtJ_G0038341.1 mouse_genomes_project 11 85619028 85619099 - Snord4a snoRNA snoRNA MGP_NODShiLtJ_T0017061.1 MGP_NODShiLtJ_G0015039.1 mouse_genomes_project 11 55138620 55141761 - Gm12198 processed_transcript processed_transcript MGP_NODShiLtJ_T0006202.1 MGP_NODShiLtJ_G0005178.1 mouse_genomes_project 11 77316515 77322953 - Gm12320 lincRNA lincRNA MGP_NODShiLtJ_T0099942.1 MGP_NODShiLtJ_G0038336.1 mouse_genomes_project 11 82021973 82022064 + Gm22771 snoRNA snoRNA MGP_NODShiLtJ_T0012362.1 MGP_NODShiLtJ_G0010470.1 mouse_genomes_project 11 8094990 8095303 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032383.1 MGP_NODShiLtJ_G0019064.1 mouse_genomes_project 11 111912320 111915097 + Dhx8 protein_coding retained_intron MGP_NODShiLtJ_T0032384.1 MGP_NODShiLtJ_G0019064.1 mouse_genomes_project 11 111912351 111950264 + MGP_NODShiLtJ_P0032384 Dhx8 protein_coding protein_coding MGP_NODShiLtJ_T0032385.1 MGP_NODShiLtJ_G0019064.1 mouse_genomes_project 11 111912430 111913839 + Dhx8 protein_coding retained_intron MGP_NODShiLtJ_T0032386.1 MGP_NODShiLtJ_G0019064.1 mouse_genomes_project 11 111912442 111949713 + MGP_NODShiLtJ_P0032386 Dhx8 protein_coding protein_coding MGP_NODShiLtJ_T0032387.1 MGP_NODShiLtJ_G0019064.1 mouse_genomes_project 11 111931830 111933226 + Dhx8 protein_coding retained_intron MGP_NODShiLtJ_T0031413.1 MGP_NODShiLtJ_G0018792.1 mouse_genomes_project 11 100287360 100289604 - MGP_NODShiLtJ_P0031413 Kif2b protein_coding protein_coding MGP_NODShiLtJ_T0012348.1 MGP_NODShiLtJ_G0010456.1 mouse_genomes_project 11 3395206 3395550 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012616.1 MGP_NODShiLtJ_G0010724.1 mouse_genomes_project 11 109619987 109620140 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017165.1 MGP_NODShiLtJ_G0015095.1 mouse_genomes_project 11 132277399 132280751 - 2810410L24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017166.1 MGP_NODShiLtJ_G0015095.1 mouse_genomes_project 11 132279706 132281852 - 2810410L24Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017046.1 MGP_NODShiLtJ_G0015029.1 mouse_genomes_project 11 23074516 23087318 + processed_transcript processed_transcript MGP_NODShiLtJ_T0003311.1 MGP_NODShiLtJ_G0003048.1 mouse_genomes_project 11 132655289 132658956 - Gm11789 antisense antisense MGP_NODShiLtJ_T0003312.1 MGP_NODShiLtJ_G0003048.1 mouse_genomes_project 11 132655315 132659890 - Gm11789 antisense antisense MGP_NODShiLtJ_T0003313.1 MGP_NODShiLtJ_G0003048.1 mouse_genomes_project 11 132655341 132660186 - Gm11789 antisense antisense MGP_NODShiLtJ_T0003314.1 MGP_NODShiLtJ_G0003048.1 mouse_genomes_project 11 132656665 132659915 - Gm11789 antisense antisense MGP_NODShiLtJ_T0003315.1 MGP_NODShiLtJ_G0003048.1 mouse_genomes_project 11 132658610 132659899 - Gm11789 antisense antisense MGP_NODShiLtJ_T0006182.1 MGP_NODShiLtJ_G0005162.1 mouse_genomes_project 11 65455116 65455507 + 1810063I02Rik lincRNA lincRNA MGP_NODShiLtJ_T0032036.1 MGP_NODShiLtJ_G0018956.1 mouse_genomes_project 11 109484322 109485023 - MGP_NODShiLtJ_P0032036 protein_coding protein_coding MGP_NODShiLtJ_T0006200.1 MGP_NODShiLtJ_G0005176.1 mouse_genomes_project 11 77182218 77184753 - Gm12315 lincRNA lincRNA MGP_NODShiLtJ_T0003286.1 MGP_NODShiLtJ_G0003028.1 mouse_genomes_project 11 125656182 125657833 - 1700001J04Rik antisense antisense MGP_NODShiLtJ_T0003287.1 MGP_NODShiLtJ_G0003028.1 mouse_genomes_project 11 125657028 125657730 - 1700001J04Rik antisense antisense MGP_NODShiLtJ_T0099895.1 MGP_NODShiLtJ_G0038289.1 mouse_genomes_project 11 330118 330235 - Gm24439 snoRNA snoRNA MGP_NODShiLtJ_T0031011.1 MGP_NODShiLtJ_G0018687.1 mouse_genomes_project 11 90745735 90822252 - MGP_NODShiLtJ_P0031011 protein_coding protein_coding MGP_NODShiLtJ_T0031012.1 MGP_NODShiLtJ_G0018687.1 mouse_genomes_project 11 90813868 90821785 - MGP_NODShiLtJ_P0031012 protein_coding protein_coding MGP_NODShiLtJ_T0003307.1 MGP_NODShiLtJ_G0003044.1 mouse_genomes_project 11 132015185 132022081 - Gm11767 antisense antisense MGP_NODShiLtJ_T0031454.1 MGP_NODShiLtJ_G0018801.1 mouse_genomes_project 11 103470217 103477748 - MGP_NODShiLtJ_P0031454 Wfikkn2 protein_coding protein_coding MGP_NODShiLtJ_T0031455.1 MGP_NODShiLtJ_G0018801.1 mouse_genomes_project 11 103477487 103481046 - Wfikkn2 protein_coding processed_transcript MGP_NODShiLtJ_T0028717.1 MGP_NODShiLtJ_G0018122.1 mouse_genomes_project 11 56284984 56296997 - MGP_NODShiLtJ_P0028717 Rmnd5b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028718.1 MGP_NODShiLtJ_G0018122.1 mouse_genomes_project 11 56284986 56297246 - MGP_NODShiLtJ_P0028718 Rmnd5b protein_coding protein_coding MGP_NODShiLtJ_T0028719.1 MGP_NODShiLtJ_G0018122.1 mouse_genomes_project 11 56285355 56287153 - MGP_NODShiLtJ_P0028719 Rmnd5b protein_coding protein_coding MGP_NODShiLtJ_T0028720.1 MGP_NODShiLtJ_G0018122.1 mouse_genomes_project 11 56290648 56297103 - Rmnd5b protein_coding processed_transcript MGP_NODShiLtJ_T0029041.1 MGP_NODShiLtJ_G0018215.1 mouse_genomes_project 11 63968763 63969885 + MGP_NODShiLtJ_P0029041 Olfr324 protein_coding protein_coding MGP_NODShiLtJ_T0027479.1 MGP_NODShiLtJ_G0017816.1 mouse_genomes_project 11 349750 360161 - MGP_NODShiLtJ_P0027479 protein_coding non_stop_decay MGP_NODShiLtJ_T0027480.1 MGP_NODShiLtJ_G0017816.1 mouse_genomes_project 11 349750 357521 - MGP_NODShiLtJ_P0027480 protein_coding protein_coding MGP_NODShiLtJ_T0027481.1 MGP_NODShiLtJ_G0017816.1 mouse_genomes_project 11 349750 360158 - MGP_NODShiLtJ_P0027481 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027482.1 MGP_NODShiLtJ_G0017816.1 mouse_genomes_project 11 349915 360173 - MGP_NODShiLtJ_P0027482 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027483.1 MGP_NODShiLtJ_G0017816.1 mouse_genomes_project 11 350028 360745 - MGP_NODShiLtJ_P0027483 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027484.1 MGP_NODShiLtJ_G0017816.1 mouse_genomes_project 11 354340 360186 - MGP_NODShiLtJ_P0027484 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028952.1 MGP_NODShiLtJ_G0018181.1 mouse_genomes_project 11 60261927 60296129 + MGP_NODShiLtJ_P0028952 Slc36a1 protein_coding protein_coding MGP_NODShiLtJ_T0028953.1 MGP_NODShiLtJ_G0018181.1 mouse_genomes_project 11 60261939 60274056 + Slc36a1 protein_coding processed_transcript MGP_NODShiLtJ_T0028954.1 MGP_NODShiLtJ_G0018181.1 mouse_genomes_project 11 60261951 60281862 + MGP_NODShiLtJ_P0028954 Slc36a1 protein_coding protein_coding MGP_NODShiLtJ_T0028955.1 MGP_NODShiLtJ_G0018181.1 mouse_genomes_project 11 60261953 60293626 + MGP_NODShiLtJ_P0028955 Slc36a1 protein_coding protein_coding MGP_NODShiLtJ_T0028956.1 MGP_NODShiLtJ_G0018181.1 mouse_genomes_project 11 60273588 60292429 + MGP_NODShiLtJ_P0028956 Slc36a1 protein_coding protein_coding MGP_NODShiLtJ_T0029832.1 MGP_NODShiLtJ_G0018405.1 mouse_genomes_project 11 76269149 76271049 - MGP_NODShiLtJ_P0029832 4933402P03Rik protein_coding protein_coding MGP_NODShiLtJ_T0029310.1 MGP_NODShiLtJ_G0018290.1 mouse_genomes_project 11 67161638 67166213 + MGP_NODShiLtJ_P0029310 Mfap4 protein_coding protein_coding MGP_NODShiLtJ_T0029311.1 MGP_NODShiLtJ_G0018290.1 mouse_genomes_project 11 67161668 67165388 + MGP_NODShiLtJ_P0029311 Mfap4 protein_coding protein_coding MGP_NODShiLtJ_T0029312.1 MGP_NODShiLtJ_G0018290.1 mouse_genomes_project 11 67161698 67163160 + Mfap4 protein_coding processed_transcript MGP_NODShiLtJ_T0029313.1 MGP_NODShiLtJ_G0018290.1 mouse_genomes_project 11 67161723 67166213 + Mfap4 protein_coding processed_transcript MGP_NODShiLtJ_T0033633.1 MGP_NODShiLtJ_G0019320.1 mouse_genomes_project 11 130227693 130234094 - Usp36 protein_coding retained_intron MGP_NODShiLtJ_T0033634.1 MGP_NODShiLtJ_G0019320.1 mouse_genomes_project 11 130227694 130259659 - MGP_NODShiLtJ_P0033634 Usp36 protein_coding protein_coding MGP_NODShiLtJ_T0033635.1 MGP_NODShiLtJ_G0019320.1 mouse_genomes_project 11 130228911 130231331 - Usp36 protein_coding retained_intron MGP_NODShiLtJ_T0033636.1 MGP_NODShiLtJ_G0019320.1 mouse_genomes_project 11 130253115 130259393 - Usp36 protein_coding retained_intron MGP_NODShiLtJ_T0033640.1 MGP_NODShiLtJ_G0019323.1 mouse_genomes_project 11 130384016 130389418 - MGP_NODShiLtJ_P0033640 Lgals3bp protein_coding protein_coding MGP_NODShiLtJ_T0033641.1 MGP_NODShiLtJ_G0019323.1 mouse_genomes_project 11 130384016 130393377 - MGP_NODShiLtJ_P0033641 Lgals3bp protein_coding protein_coding MGP_NODShiLtJ_T0033642.1 MGP_NODShiLtJ_G0019323.1 mouse_genomes_project 11 130387872 130393137 - MGP_NODShiLtJ_P0033642 Lgals3bp protein_coding protein_coding MGP_NODShiLtJ_T0033643.1 MGP_NODShiLtJ_G0019323.1 mouse_genomes_project 11 130388074 130393157 - Lgals3bp protein_coding processed_transcript MGP_NODShiLtJ_T0033644.1 MGP_NODShiLtJ_G0019323.1 mouse_genomes_project 11 130391044 130392322 - MGP_NODShiLtJ_P0033644 Lgals3bp protein_coding protein_coding MGP_NODShiLtJ_T0098673.1 MGP_NODShiLtJ_G0037067.1 mouse_genomes_project 11 24809027 24809100 - Gm22787 snRNA snRNA MGP_NODShiLtJ_T0017077.1 MGP_NODShiLtJ_G0015047.1 mouse_genomes_project 11 68406949 68408879 + 2410006H16Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0012586.1 MGP_NODShiLtJ_G0010694.1 mouse_genomes_project 11 95696530 95697910 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012517.1 MGP_NODShiLtJ_G0010625.1 mouse_genomes_project 11 67711092 67711489 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033974.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132938581 132945784 - MGP_NODShiLtJ_P0033974 Dus1l protein_coding protein_coding MGP_NODShiLtJ_T0033975.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132938582 132939828 - Dus1l protein_coding retained_intron MGP_NODShiLtJ_T0033976.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132938582 132945776 - MGP_NODShiLtJ_P0033976 Dus1l protein_coding protein_coding MGP_NODShiLtJ_T0033977.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132938582 132945776 - MGP_NODShiLtJ_P0033977 Dus1l protein_coding protein_coding MGP_NODShiLtJ_T0033978.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132938584 132939231 - Dus1l protein_coding retained_intron MGP_NODShiLtJ_T0033979.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132938586 132945770 - Dus1l protein_coding retained_intron MGP_NODShiLtJ_T0033980.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132938586 132945779 - MGP_NODShiLtJ_P0033980 Dus1l protein_coding protein_coding MGP_NODShiLtJ_T0033981.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132942154 132945758 - MGP_NODShiLtJ_P0033981 Dus1l protein_coding protein_coding MGP_NODShiLtJ_T0033982.1 MGP_NODShiLtJ_G0019386.1 mouse_genomes_project 11 132943225 132945774 - MGP_NODShiLtJ_P0033982 Dus1l protein_coding protein_coding MGP_NODShiLtJ_T0003092.1 MGP_NODShiLtJ_G0002867.1 mouse_genomes_project 11 37958390 37961566 + Gm12126 antisense antisense MGP_NODShiLtJ_T0033873.1 MGP_NODShiLtJ_G0019369.1 mouse_genomes_project 11 132726925 132733170 - MGP_NODShiLtJ_P0033873 Alyref protein_coding protein_coding MGP_NODShiLtJ_T0033874.1 MGP_NODShiLtJ_G0019369.1 mouse_genomes_project 11 132729313 132730462 - Alyref protein_coding processed_transcript MGP_NODShiLtJ_T0033875.1 MGP_NODShiLtJ_G0019369.1 mouse_genomes_project 11 132730420 132733036 - Alyref protein_coding retained_intron MGP_NODShiLtJ_T0003144.1 MGP_NODShiLtJ_G0002914.1 mouse_genomes_project 11 68409836 68411818 + Lrrc75aos2 antisense antisense MGP_NODShiLtJ_T0003145.1 MGP_NODShiLtJ_G0002914.1 mouse_genomes_project 11 68409837 68411092 + Lrrc75aos2 antisense antisense MGP_NODShiLtJ_T0029663.1 MGP_NODShiLtJ_G0018364.1 mouse_genomes_project 11 75412899 75414761 + MGP_NODShiLtJ_P0029663 Borcs6 protein_coding protein_coding MGP_NODShiLtJ_T0098729.1 MGP_NODShiLtJ_G0037123.1 mouse_genomes_project 11 111832547 111832738 + Rnu2-10 snRNA snRNA MGP_NODShiLtJ_T0030352.1 MGP_NODShiLtJ_G0018521.1 mouse_genomes_project 11 80682884 80841466 + MGP_NODShiLtJ_P0030352 protein_coding protein_coding MGP_NODShiLtJ_T0030353.1 MGP_NODShiLtJ_G0018521.1 mouse_genomes_project 11 80682902 80840997 + MGP_NODShiLtJ_P0030353 protein_coding protein_coding MGP_NODShiLtJ_T0030360.1 MGP_NODShiLtJ_G0018521.1 mouse_genomes_project 11 80840527 80841466 + MGP_NODShiLtJ_P0030360 protein_coding protein_coding MGP_NODShiLtJ_T0030789.1 MGP_NODShiLtJ_G0018625.1 mouse_genomes_project 11 85799092 85804779 + MGP_NODShiLtJ_P0030789 Unc119 protein_coding protein_coding MGP_NODShiLtJ_T0030790.1 MGP_NODShiLtJ_G0018625.1 mouse_genomes_project 11 85799108 85803464 + Unc119 protein_coding retained_intron MGP_NODShiLtJ_T0030791.1 MGP_NODShiLtJ_G0018625.1 mouse_genomes_project 11 85799116 85804779 + MGP_NODShiLtJ_P0030791 Unc119 protein_coding protein_coding MGP_NODShiLtJ_T0030792.1 MGP_NODShiLtJ_G0018625.1 mouse_genomes_project 11 85799155 85804511 + Unc119 protein_coding retained_intron MGP_NODShiLtJ_T0030793.1 MGP_NODShiLtJ_G0018625.1 mouse_genomes_project 11 85802280 85804594 + MGP_NODShiLtJ_P0030793 Unc119 protein_coding protein_coding MGP_NODShiLtJ_T0030794.1 MGP_NODShiLtJ_G0018625.1 mouse_genomes_project 11 85802525 85803734 + Unc119 protein_coding retained_intron MGP_NODShiLtJ_T0030795.1 MGP_NODShiLtJ_G0018625.1 mouse_genomes_project 11 85803549 85804613 + Unc119 protein_coding retained_intron MGP_NODShiLtJ_T0028514.1 MGP_NODShiLtJ_G0018068.1 mouse_genomes_project 11 53366098 53388643 - MGP_NODShiLtJ_P0028514 protein_coding protein_coding MGP_NODShiLtJ_T0009672.1 MGP_NODShiLtJ_G0007805.1 mouse_genomes_project 11 126927307 126927415 + Gm25837 miRNA miRNA MGP_NODShiLtJ_T0033531.1 MGP_NODShiLtJ_G0019299.1 mouse_genomes_project 11 128655404 128658601 - MGP_NODShiLtJ_P0033531 Srsf2 protein_coding protein_coding MGP_NODShiLtJ_T0033532.1 MGP_NODShiLtJ_G0019299.1 mouse_genomes_project 11 128655407 128657726 - Srsf2 protein_coding retained_intron MGP_NODShiLtJ_T0033533.1 MGP_NODShiLtJ_G0019299.1 mouse_genomes_project 11 128655409 128657593 - MGP_NODShiLtJ_P0033533 Srsf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033534.1 MGP_NODShiLtJ_G0019299.1 mouse_genomes_project 11 128655547 128658579 - MGP_NODShiLtJ_P0033534 Srsf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033535.1 MGP_NODShiLtJ_G0019299.1 mouse_genomes_project 11 128655555 128658579 - MGP_NODShiLtJ_P0033535 Srsf2 protein_coding protein_coding MGP_NODShiLtJ_T0033536.1 MGP_NODShiLtJ_G0019299.1 mouse_genomes_project 11 128655609 128657078 - Srsf2 protein_coding processed_transcript MGP_NODShiLtJ_T0009624.1 MGP_NODShiLtJ_G0007757.1 mouse_genomes_project 11 82711584 82711667 + Mir3971 miRNA miRNA MGP_NODShiLtJ_T0012392.1 MGP_NODShiLtJ_G0010500.1 mouse_genomes_project 11 20374356 20374886 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017033.1 MGP_NODShiLtJ_G0015023.1 mouse_genomes_project 11 9620908 9668144 - Gm11999 processed_transcript processed_transcript MGP_NODShiLtJ_T0033264.1 MGP_NODShiLtJ_G0019252.1 mouse_genomes_project 11 127313439 127317539 + MGP_NODShiLtJ_P0033264 Mrps7 protein_coding protein_coding MGP_NODShiLtJ_T0033265.1 MGP_NODShiLtJ_G0019252.1 mouse_genomes_project 11 127314381 127316515 + Mrps7 protein_coding processed_transcript MGP_NODShiLtJ_T0006284.1 MGP_NODShiLtJ_G0005237.1 mouse_genomes_project 11 123377521 123402627 + Gm11680 lincRNA lincRNA MGP_NODShiLtJ_T0030369.1 MGP_NODShiLtJ_G0018532.1 mouse_genomes_project 11 81037907 81059337 + MGP_NODShiLtJ_P0030369 protein_coding protein_coding MGP_NODShiLtJ_T0030370.1 MGP_NODShiLtJ_G0018532.1 mouse_genomes_project 11 81038117 81058558 + protein_coding processed_transcript MGP_NODShiLtJ_T0030371.1 MGP_NODShiLtJ_G0018532.1 mouse_genomes_project 11 81038137 81057124 + MGP_NODShiLtJ_P0030371 protein_coding protein_coding MGP_NODShiLtJ_T0028526.1 MGP_NODShiLtJ_G0018074.1 mouse_genomes_project 11 53515482 53537019 - MGP_NODShiLtJ_P0028526 Btnl9 protein_coding protein_coding MGP_NODShiLtJ_T0028527.1 MGP_NODShiLtJ_G0018074.1 mouse_genomes_project 11 53518921 53536905 - MGP_NODShiLtJ_P0028527 Btnl9 protein_coding protein_coding MGP_NODShiLtJ_T0028528.1 MGP_NODShiLtJ_G0018074.1 mouse_genomes_project 11 53519189 53520543 - Btnl9 protein_coding retained_intron MGP_NODShiLtJ_T0028529.1 MGP_NODShiLtJ_G0018074.1 mouse_genomes_project 11 53524693 53536897 - MGP_NODShiLtJ_P0028529 Btnl9 protein_coding protein_coding MGP_NODShiLtJ_T0028530.1 MGP_NODShiLtJ_G0018074.1 mouse_genomes_project 11 53532156 53536927 - Btnl9 protein_coding processed_transcript MGP_NODShiLtJ_T0012350.1 MGP_NODShiLtJ_G0010458.1 mouse_genomes_project 11 3629355 3629643 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017034.1 MGP_NODShiLtJ_G0015024.1 mouse_genomes_project 11 16189946 16209003 - Eldr processed_transcript processed_transcript MGP_NODShiLtJ_T0017035.1 MGP_NODShiLtJ_G0015024.1 mouse_genomes_project 11 16189951 16209022 - Eldr processed_transcript processed_transcript MGP_NODShiLtJ_T0017036.1 MGP_NODShiLtJ_G0015024.1 mouse_genomes_project 11 16190114 16208946 - Eldr processed_transcript processed_transcript MGP_NODShiLtJ_T0017037.1 MGP_NODShiLtJ_G0015024.1 mouse_genomes_project 11 16190378 16209004 - Eldr processed_transcript processed_transcript MGP_NODShiLtJ_T0017038.1 MGP_NODShiLtJ_G0015024.1 mouse_genomes_project 11 16190421 16209186 - Eldr processed_transcript processed_transcript MGP_NODShiLtJ_T0017039.1 MGP_NODShiLtJ_G0015024.1 mouse_genomes_project 11 16190494 16208986 - Eldr processed_transcript processed_transcript MGP_NODShiLtJ_T0017040.1 MGP_NODShiLtJ_G0015024.1 mouse_genomes_project 11 16193975 16208997 - Eldr processed_transcript processed_transcript MGP_NODShiLtJ_T0012354.1 MGP_NODShiLtJ_G0010462.1 mouse_genomes_project 11 3950024 3950602 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029106.1 MGP_NODShiLtJ_G0018245.1 mouse_genomes_project 11 64742398 64789741 - MGP_NODShiLtJ_P0029106 Wnt3a protein_coding protein_coding MGP_NODShiLtJ_T0031074.1 MGP_NODShiLtJ_G0018712.1 mouse_genomes_project 11 91844974 91865935 + MGP_NODShiLtJ_P0031074 Ddx52 protein_coding protein_coding MGP_NODShiLtJ_T0031075.1 MGP_NODShiLtJ_G0018712.1 mouse_genomes_project 11 91849130 91855008 + Ddx52 protein_coding processed_transcript MGP_NODShiLtJ_T0012543.1 MGP_NODShiLtJ_G0010651.1 mouse_genomes_project 11 79974075 79975508 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003178.1 MGP_NODShiLtJ_G0002942.1 mouse_genomes_project 11 85724673 85725002 - Gm11192 antisense antisense MGP_NODShiLtJ_T0028457.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50406077 50410006 + MGP_NODShiLtJ_P0028457 Med7 protein_coding protein_coding MGP_NODShiLtJ_T0028458.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50406101 50409912 + MGP_NODShiLtJ_P0028458 Med7 protein_coding protein_coding MGP_NODShiLtJ_T0028459.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50406104 50410675 + MGP_NODShiLtJ_P0028459 Med7 protein_coding protein_coding MGP_NODShiLtJ_T0028460.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50406113 50411869 + MGP_NODShiLtJ_P0028460 Med7 protein_coding protein_coding MGP_NODShiLtJ_T0028461.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50406123 50410248 + MGP_NODShiLtJ_P0028461 Med7 protein_coding protein_coding MGP_NODShiLtJ_T0028462.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50406126 50411869 + MGP_NODShiLtJ_P0028462 Med7 protein_coding protein_coding MGP_NODShiLtJ_T0028463.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50406130 50410198 + MGP_NODShiLtJ_P0028463 Med7 protein_coding protein_coding MGP_NODShiLtJ_T0028464.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50406157 50409095 + Med7 protein_coding processed_transcript MGP_NODShiLtJ_T0028465.1 MGP_NODShiLtJ_G0018049.1 mouse_genomes_project 11 50408804 50410126 + MGP_NODShiLtJ_P0028465 Med7 protein_coding protein_coding MGP_NODShiLtJ_T0028058.1 MGP_NODShiLtJ_G0017948.1 mouse_genomes_project 11 23816968 23891044 + MGP_NODShiLtJ_P0028058 Pus10 protein_coding protein_coding MGP_NODShiLtJ_T0028059.1 MGP_NODShiLtJ_G0017948.1 mouse_genomes_project 11 23816991 23889693 + MGP_NODShiLtJ_P0028059 Pus10 protein_coding protein_coding MGP_NODShiLtJ_T0028060.1 MGP_NODShiLtJ_G0017948.1 mouse_genomes_project 11 23817301 23891044 + MGP_NODShiLtJ_P0028060 Pus10 protein_coding protein_coding MGP_NODShiLtJ_T0028061.1 MGP_NODShiLtJ_G0017948.1 mouse_genomes_project 11 23817482 23825499 + Pus10 protein_coding retained_intron MGP_NODShiLtJ_T0028062.1 MGP_NODShiLtJ_G0017948.1 mouse_genomes_project 11 23817805 23825385 + MGP_NODShiLtJ_P0028062 Pus10 protein_coding protein_coding MGP_NODShiLtJ_T0028063.1 MGP_NODShiLtJ_G0017948.1 mouse_genomes_project 11 23875776 23887239 + Pus10 protein_coding retained_intron MGP_NODShiLtJ_T0028064.1 MGP_NODShiLtJ_G0017948.1 mouse_genomes_project 11 23876854 23889566 + Pus10 protein_coding retained_intron MGP_NODShiLtJ_T0030816.1 MGP_NODShiLtJ_G0018633.1 mouse_genomes_project 11 85971606 85983839 + MGP_NODShiLtJ_P0030816 Poldip2 protein_coding protein_coding MGP_NODShiLtJ_T0030817.1 MGP_NODShiLtJ_G0018633.1 mouse_genomes_project 11 85971801 85973399 + Poldip2 protein_coding processed_transcript MGP_NODShiLtJ_T0030818.1 MGP_NODShiLtJ_G0018633.1 mouse_genomes_project 11 85971829 85983274 + MGP_NODShiLtJ_P0030818 Poldip2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030819.1 MGP_NODShiLtJ_G0018633.1 mouse_genomes_project 11 85975647 85979035 + Poldip2 protein_coding retained_intron MGP_NODShiLtJ_T0030820.1 MGP_NODShiLtJ_G0018633.1 mouse_genomes_project 11 85976237 85979688 + Poldip2 protein_coding retained_intron MGP_NODShiLtJ_T0030821.1 MGP_NODShiLtJ_G0018633.1 mouse_genomes_project 11 85979433 85980364 + Poldip2 protein_coding retained_intron MGP_NODShiLtJ_T0031037.1 MGP_NODShiLtJ_G0018696.1 mouse_genomes_project 11 91284642 91292136 - MGP_NODShiLtJ_P0031037 Gas2l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031038.1 MGP_NODShiLtJ_G0018696.1 mouse_genomes_project 11 91284642 91292136 - MGP_NODShiLtJ_P0031038 Gas2l2 protein_coding protein_coding MGP_NODShiLtJ_T0027609.1 MGP_NODShiLtJ_G0017847.1 mouse_genomes_project 11 1879120 1899956 + MGP_NODShiLtJ_P0027609 Nipsnap1 protein_coding protein_coding MGP_NODShiLtJ_T0027610.1 MGP_NODShiLtJ_G0017847.1 mouse_genomes_project 11 1879168 1899373 + MGP_NODShiLtJ_P0027610 Nipsnap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027611.1 MGP_NODShiLtJ_G0017847.1 mouse_genomes_project 11 1879174 1890572 + Nipsnap1 protein_coding processed_transcript MGP_NODShiLtJ_T0027612.1 MGP_NODShiLtJ_G0017847.1 mouse_genomes_project 11 1889347 1894914 + MGP_NODShiLtJ_P0027612 Nipsnap1 protein_coding protein_coding MGP_NODShiLtJ_T0027613.1 MGP_NODShiLtJ_G0017847.1 mouse_genomes_project 11 1889359 1895760 + Nipsnap1 protein_coding processed_transcript MGP_NODShiLtJ_T0027614.1 MGP_NODShiLtJ_G0017847.1 mouse_genomes_project 11 1889417 1890284 + Nipsnap1 protein_coding processed_transcript MGP_NODShiLtJ_T0027915.1 MGP_NODShiLtJ_G0017916.1 mouse_genomes_project 11 16537697 16543029 + C1d protein_coding processed_transcript MGP_NODShiLtJ_T0027916.1 MGP_NODShiLtJ_G0017916.1 mouse_genomes_project 11 16537710 16544413 + C1d protein_coding processed_transcript MGP_NODShiLtJ_T0027917.1 MGP_NODShiLtJ_G0017916.1 mouse_genomes_project 11 16537712 16548957 + MGP_NODShiLtJ_P0027917 C1d protein_coding protein_coding MGP_NODShiLtJ_T0027918.1 MGP_NODShiLtJ_G0017916.1 mouse_genomes_project 11 16537806 16546405 + MGP_NODShiLtJ_P0027918 C1d protein_coding protein_coding MGP_NODShiLtJ_T0027919.1 MGP_NODShiLtJ_G0017916.1 mouse_genomes_project 11 16543739 16546341 + C1d protein_coding processed_transcript MGP_NODShiLtJ_T0101549.1 MGP_NODShiLtJ_G0039719.1 mouse_genomes_project 11 65120702 65121077 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0033799.1 MGP_NODShiLtJ_G0019350.1 mouse_genomes_project 11 132325753 132393867 + MGP_NODShiLtJ_P0033799 Bahcc1 protein_coding protein_coding MGP_NODShiLtJ_T0033800.1 MGP_NODShiLtJ_G0019350.1 mouse_genomes_project 11 132325753 132393881 + MGP_NODShiLtJ_P0033800 Bahcc1 protein_coding protein_coding MGP_NODShiLtJ_T0033801.1 MGP_NODShiLtJ_G0019350.1 mouse_genomes_project 11 132329251 132330091 + Bahcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0033802.1 MGP_NODShiLtJ_G0019350.1 mouse_genomes_project 11 132329505 132393867 + MGP_NODShiLtJ_P0033802 Bahcc1 protein_coding protein_coding MGP_NODShiLtJ_T0033803.1 MGP_NODShiLtJ_G0019350.1 mouse_genomes_project 11 132387704 132393752 + Bahcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0030045.1 MGP_NODShiLtJ_G0018447.1 mouse_genomes_project 11 77056707 77057808 - MGP_NODShiLtJ_P0030045 Vmo1 protein_coding protein_coding MGP_NODShiLtJ_T0012549.1 MGP_NODShiLtJ_G0010657.1 mouse_genomes_project 11 81843154 81843322 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030983.1 MGP_NODShiLtJ_G0018680.1 mouse_genomes_project 11 90552647 90623824 - MGP_NODShiLtJ_P0030983 Rffl protein_coding protein_coding MGP_NODShiLtJ_T0030984.1 MGP_NODShiLtJ_G0018680.1 mouse_genomes_project 11 90553117 90597720 - MGP_NODShiLtJ_P0030984 Rffl protein_coding protein_coding MGP_NODShiLtJ_T0030985.1 MGP_NODShiLtJ_G0018680.1 mouse_genomes_project 11 90556247 90579526 - MGP_NODShiLtJ_P0030985 Rffl protein_coding protein_coding MGP_NODShiLtJ_T0030986.1 MGP_NODShiLtJ_G0018680.1 mouse_genomes_project 11 90561494 90597964 - MGP_NODShiLtJ_P0030986 Rffl protein_coding protein_coding MGP_NODShiLtJ_T0029833.1 MGP_NODShiLtJ_G0018406.1 mouse_genomes_project 11 76273458 76274763 - MGP_NODShiLtJ_P0029833 Spem1 protein_coding protein_coding MGP_NODShiLtJ_T0033126.1 MGP_NODShiLtJ_G0019218.1 mouse_genomes_project 11 126457670 126473827 + MGP_NODShiLtJ_P0033126 Cd300a protein_coding protein_coding MGP_NODShiLtJ_T0033127.1 MGP_NODShiLtJ_G0019218.1 mouse_genomes_project 11 126457670 126473827 + MGP_NODShiLtJ_P0033127 Cd300a protein_coding protein_coding MGP_NODShiLtJ_T0033128.1 MGP_NODShiLtJ_G0019218.1 mouse_genomes_project 11 126457923 126461097 + Cd300a protein_coding processed_transcript MGP_NODShiLtJ_T0030048.1 MGP_NODShiLtJ_G0018449.1 mouse_genomes_project 11 77071679 77072736 + Psmb6 protein_coding retained_intron MGP_NODShiLtJ_T0030049.1 MGP_NODShiLtJ_G0018449.1 mouse_genomes_project 11 77071698 77073961 + MGP_NODShiLtJ_P0030049 Psmb6 protein_coding protein_coding MGP_NODShiLtJ_T0030050.1 MGP_NODShiLtJ_G0018449.1 mouse_genomes_project 11 77072421 77073505 + Psmb6 protein_coding retained_intron MGP_NODShiLtJ_T0030051.1 MGP_NODShiLtJ_G0018449.1 mouse_genomes_project 11 77073383 77074170 + Psmb6 protein_coding retained_intron MGP_NODShiLtJ_T0029476.1 MGP_NODShiLtJ_G0018322.1 mouse_genomes_project 11 70394756 70490569 + MGP_NODShiLtJ_P0029476 Hs3st3a1 protein_coding protein_coding MGP_NODShiLtJ_T0028277.1 MGP_NODShiLtJ_G0018000.1 mouse_genomes_project 11 35098466 35101909 - Gm12117 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0028278.1 MGP_NODShiLtJ_G0018000.1 mouse_genomes_project 11 35098587 35101506 - MGP_NODShiLtJ_P0028278 Gm12117 protein_coding protein_coding MGP_NODShiLtJ_T0029728.1 MGP_NODShiLtJ_G0018378.1 mouse_genomes_project 11 75734925 75740278 + MGP_NODShiLtJ_P0029728 Gm17305 protein_coding protein_coding MGP_NODShiLtJ_T0009568.1 MGP_NODShiLtJ_G0007701.1 mouse_genomes_project 11 24955119 24955263 - Gm25507 miRNA miRNA MGP_NODShiLtJ_T0030797.1 MGP_NODShiLtJ_G0018627.1 mouse_genomes_project 11 85852642 85877765 - MGP_NODShiLtJ_P0030797 Slc13a2 protein_coding protein_coding MGP_NODShiLtJ_T0033762.1 MGP_NODShiLtJ_G0019345.1 mouse_genomes_project 11 132088644 132131722 - Aatk protein_coding processed_transcript MGP_NODShiLtJ_T0033763.1 MGP_NODShiLtJ_G0019345.1 mouse_genomes_project 11 132088644 132093740 - Aatk protein_coding processed_transcript MGP_NODShiLtJ_T0033764.1 MGP_NODShiLtJ_G0019345.1 mouse_genomes_project 11 132088644 132131075 - MGP_NODShiLtJ_P0033764 Aatk protein_coding protein_coding MGP_NODShiLtJ_T0033765.1 MGP_NODShiLtJ_G0019345.1 mouse_genomes_project 11 132090547 132105902 - MGP_NODShiLtJ_P0033765 Aatk protein_coding protein_coding MGP_NODShiLtJ_T0033766.1 MGP_NODShiLtJ_G0019345.1 mouse_genomes_project 11 132093726 132099723 - Aatk protein_coding processed_transcript MGP_NODShiLtJ_T0033767.1 MGP_NODShiLtJ_G0019345.1 mouse_genomes_project 11 132095021 132099982 - Aatk protein_coding processed_transcript MGP_NODShiLtJ_T0033768.1 MGP_NODShiLtJ_G0019345.1 mouse_genomes_project 11 132096723 132099698 - Aatk protein_coding processed_transcript MGP_NODShiLtJ_T0033769.1 MGP_NODShiLtJ_G0019345.1 mouse_genomes_project 11 132099563 132102995 - Aatk protein_coding processed_transcript MGP_NODShiLtJ_T0033945.1 MGP_NODShiLtJ_G0019379.1 mouse_genomes_project 11 132854946 132855988 - protein_coding processed_transcript MGP_NODShiLtJ_T0033946.1 MGP_NODShiLtJ_G0019379.1 mouse_genomes_project 11 132854946 132857737 - MGP_NODShiLtJ_P0033946 protein_coding protein_coding MGP_NODShiLtJ_T0033947.1 MGP_NODShiLtJ_G0019379.1 mouse_genomes_project 11 132854946 132857737 - MGP_NODShiLtJ_P0033947 protein_coding protein_coding MGP_NODShiLtJ_T0033948.1 MGP_NODShiLtJ_G0019379.1 mouse_genomes_project 11 132854946 132857743 - MGP_NODShiLtJ_P0033948 protein_coding protein_coding MGP_NODShiLtJ_T0033949.1 MGP_NODShiLtJ_G0019379.1 mouse_genomes_project 11 132854947 132857743 - MGP_NODShiLtJ_P0033949 protein_coding protein_coding MGP_NODShiLtJ_T0028899.1 MGP_NODShiLtJ_G0018168.1 mouse_genomes_project 11 59333232 59384868 + Meikin protein_coding retained_intron MGP_NODShiLtJ_T0028900.1 MGP_NODShiLtJ_G0018168.1 mouse_genomes_project 11 59333232 59384903 + MGP_NODShiLtJ_P0028900 Meikin protein_coding protein_coding MGP_NODShiLtJ_T0030559.1 MGP_NODShiLtJ_G0018579.1 mouse_genomes_project 11 83436071 83437132 + MGP_NODShiLtJ_P0030559 Dbil5 protein_coding protein_coding MGP_NODShiLtJ_T0012397.1 MGP_NODShiLtJ_G0010505.1 mouse_genomes_project 11 20978551 20978731 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029030.1 MGP_NODShiLtJ_G0018206.1 mouse_genomes_project 11 63790058 63799117 + MGP_NODShiLtJ_P0029030 Gm12253 protein_coding protein_coding MGP_NODShiLtJ_T0033178.1 MGP_NODShiLtJ_G0019237.1 mouse_genomes_project 11 126994598 127001463 - MGP_NODShiLtJ_P0033178 Ush1g protein_coding protein_coding MGP_NODShiLtJ_T0033513.1 MGP_NODShiLtJ_G0019295.1 mouse_genomes_project 11 128569113 128572538 - MGP_NODShiLtJ_P0033513 St6galnac1 protein_coding protein_coding MGP_NODShiLtJ_T0033651.1 MGP_NODShiLtJ_G0019325.1 mouse_genomes_project 11 130419658 130438341 + MGP_NODShiLtJ_P0033651 C1qtnf1 protein_coding protein_coding MGP_NODShiLtJ_T0033652.1 MGP_NODShiLtJ_G0019325.1 mouse_genomes_project 11 130420010 130444477 + MGP_NODShiLtJ_P0033652 C1qtnf1 protein_coding protein_coding MGP_NODShiLtJ_T0033653.1 MGP_NODShiLtJ_G0019325.1 mouse_genomes_project 11 130425346 130444477 + MGP_NODShiLtJ_P0033653 C1qtnf1 protein_coding protein_coding MGP_NODShiLtJ_T0033654.1 MGP_NODShiLtJ_G0019325.1 mouse_genomes_project 11 130437978 130438348 + MGP_NODShiLtJ_P0033654 C1qtnf1 protein_coding protein_coding MGP_NODShiLtJ_T0029273.1 MGP_NODShiLtJ_G0018283.1 mouse_genomes_project 11 66776830 66800295 + MGP_NODShiLtJ_P0029273 Tnfrsf13b protein_coding protein_coding MGP_NODShiLtJ_T0029274.1 MGP_NODShiLtJ_G0018283.1 mouse_genomes_project 11 66776833 66797794 + MGP_NODShiLtJ_P0029274 Tnfrsf13b protein_coding protein_coding MGP_NODShiLtJ_T0029275.1 MGP_NODShiLtJ_G0018283.1 mouse_genomes_project 11 66776864 66797837 + MGP_NODShiLtJ_P0029275 Tnfrsf13b protein_coding protein_coding MGP_NODShiLtJ_T0029276.1 MGP_NODShiLtJ_G0018283.1 mouse_genomes_project 11 66791719 66798565 + MGP_NODShiLtJ_P0029276 Tnfrsf13b protein_coding protein_coding MGP_NODShiLtJ_T0029277.1 MGP_NODShiLtJ_G0018283.1 mouse_genomes_project 11 66793349 66798856 + Tnfrsf13b protein_coding processed_transcript MGP_NODShiLtJ_T0029278.1 MGP_NODShiLtJ_G0018283.1 mouse_genomes_project 11 66793387 66798729 + Tnfrsf13b protein_coding processed_transcript MGP_NODShiLtJ_T0029279.1 MGP_NODShiLtJ_G0018283.1 mouse_genomes_project 11 66793553 66798682 + Tnfrsf13b protein_coding processed_transcript MGP_NODShiLtJ_T0032088.1 MGP_NODShiLtJ_G0019000.1 mouse_genomes_project 11 110246405 110251218 - MGP_NODShiLtJ_P0032088 Krt17 protein_coding protein_coding MGP_NODShiLtJ_T0012349.1 MGP_NODShiLtJ_G0010457.1 mouse_genomes_project 11 3622415 3622735 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033637.1 MGP_NODShiLtJ_G0019321.1 mouse_genomes_project 11 130270359 130331805 - MGP_NODShiLtJ_P0033637 Timp2 protein_coding protein_coding MGP_NODShiLtJ_T0033655.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130471421 130483767 + MGP_NODShiLtJ_P0033655 Engase protein_coding protein_coding MGP_NODShiLtJ_T0033656.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130471533 130473846 + MGP_NODShiLtJ_P0033656 Engase protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033657.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130471538 130477622 + MGP_NODShiLtJ_P0033657 Engase protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033658.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130471552 130483645 + MGP_NODShiLtJ_P0033658 Engase protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033659.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130471564 130482331 + MGP_NODShiLtJ_P0033659 Engase protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033660.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130471575 130483767 + MGP_NODShiLtJ_P0033660 Engase protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033661.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130475679 130477504 + Engase protein_coding retained_intron MGP_NODShiLtJ_T0033662.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130476946 130482331 + Engase protein_coding retained_intron MGP_NODShiLtJ_T0033663.1 MGP_NODShiLtJ_G0019326.1 mouse_genomes_project 11 130479047 130482067 + MGP_NODShiLtJ_P0033663 Engase protein_coding protein_coding MGP_NODShiLtJ_T0031611.1 MGP_NODShiLtJ_G0018839.1 mouse_genomes_project 11 105286815 105292733 + MGP_NODShiLtJ_P0031611 Phospho1 protein_coding protein_coding MGP_NODShiLtJ_T0031612.1 MGP_NODShiLtJ_G0018839.1 mouse_genomes_project 11 105286816 105295264 + MGP_NODShiLtJ_P0031612 Phospho1 protein_coding protein_coding MGP_NODShiLtJ_T0031614.1 MGP_NODShiLtJ_G0018839.1 mouse_genomes_project 11 105292794 105293624 + MGP_NODShiLtJ_P0031614 Phospho1 protein_coding protein_coding MGP_NODShiLtJ_T0032548.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112707841 112724420 - MGP_NODShiLtJ_P0032548 Itga2b protein_coding protein_coding MGP_NODShiLtJ_T0032549.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112707848 112710735 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032550.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112710383 112711865 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032551.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112710441 112713110 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032552.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112711016 112721736 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032553.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112711744 112712904 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032554.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112712054 112715380 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032555.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112715756 112716482 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032556.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112720823 112721492 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032557.1 MGP_NODShiLtJ_G0019090.1 mouse_genomes_project 11 112722336 112724659 - Itga2b protein_coding processed_transcript MGP_NODShiLtJ_T0032041.1 MGP_NODShiLtJ_G0018961.1 mouse_genomes_project 11 109520767 109521841 - MGP_NODShiLtJ_P0032041 Krtap4-7 protein_coding protein_coding MGP_NODShiLtJ_T0032248.1 MGP_NODShiLtJ_G0019035.1 mouse_genomes_project 11 111179483 111185821 + MGP_NODShiLtJ_P0032248 Tubg1 protein_coding protein_coding MGP_NODShiLtJ_T0032249.1 MGP_NODShiLtJ_G0019035.1 mouse_genomes_project 11 111184045 111185230 + Tubg1 protein_coding processed_transcript MGP_NODShiLtJ_T0098671.1 MGP_NODShiLtJ_G0037065.1 mouse_genomes_project 11 23608461 23608568 - Gm22753 snRNA snRNA MGP_NODShiLtJ_T0012525.1 MGP_NODShiLtJ_G0010633.1 mouse_genomes_project 11 71196571 71197160 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028676.1 MGP_NODShiLtJ_G0018111.1 mouse_genomes_project 11 55513857 55516814 - MGP_NODShiLtJ_P0028676 Prop1 protein_coding protein_coding MGP_NODShiLtJ_T0028677.1 MGP_NODShiLtJ_G0018111.1 mouse_genomes_project 11 55514243 55515506 - Prop1 protein_coding retained_intron MGP_NODShiLtJ_T0028678.1 MGP_NODShiLtJ_G0018111.1 mouse_genomes_project 11 55515265 55516800 - MGP_NODShiLtJ_P0028678 Prop1 protein_coding protein_coding MGP_NODShiLtJ_T0033638.1 MGP_NODShiLtJ_G0019322.1 mouse_genomes_project 11 130309406 130319137 - MGP_NODShiLtJ_P0033638 BC100451 protein_coding protein_coding MGP_NODShiLtJ_T0033639.1 MGP_NODShiLtJ_G0019322.1 mouse_genomes_project 11 130309461 130311063 - MGP_NODShiLtJ_P0033639 BC100451 protein_coding protein_coding MGP_NODShiLtJ_T0012557.1 MGP_NODShiLtJ_G0010665.1 mouse_genomes_project 11 85021909 85022676 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003273.1 MGP_NODShiLtJ_G0003018.1 mouse_genomes_project 11 118151747 118154910 + Gm11713 antisense antisense MGP_NODShiLtJ_T0009621.1 MGP_NODShiLtJ_G0007754.1 mouse_genomes_project 11 82303575 82303641 + Mir132 miRNA miRNA MGP_NODShiLtJ_T0011685.1 MGP_NODShiLtJ_G0009816.1 mouse_genomes_project 11 80596686 80597749 - MGP_NODShiLtJ_P0011685 Olfr388-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0003087.1 MGP_NODShiLtJ_G0002862.1 mouse_genomes_project 11 30898477 30900752 + Gm12089 antisense antisense MGP_NODShiLtJ_T0006285.1 MGP_NODShiLtJ_G0005238.1 mouse_genomes_project 11 124142694 124152147 - Gm11681 lincRNA lincRNA MGP_NODShiLtJ_T0099937.1 MGP_NODShiLtJ_G0038331.1 mouse_genomes_project 11 76076591 76076735 - Gm22988 snoRNA snoRNA MGP_NODShiLtJ_T0012358.1 MGP_NODShiLtJ_G0010466.1 mouse_genomes_project 11 5532229 5533963 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011206.1 MGP_NODShiLtJ_G0009339.1 mouse_genomes_project 11 118632129 118632416 + Gm23120 misc_RNA misc_RNA MGP_NODShiLtJ_T0009634.1 MGP_NODShiLtJ_G0007767.1 mouse_genomes_project 11 92886994 92887061 + Gm23564 miRNA miRNA MGP_NODShiLtJ_T0012466.1 MGP_NODShiLtJ_G0010574.1 mouse_genomes_project 11 52912403 52918308 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012548.1 MGP_NODShiLtJ_G0010656.1 mouse_genomes_project 11 81340718 81341640 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031499.1 MGP_NODShiLtJ_G0018808.1 mouse_genomes_project 11 103752453 103762853 - MGP_NODShiLtJ_P0031499 Epn3 protein_coding protein_coding MGP_NODShiLtJ_T0031500.1 MGP_NODShiLtJ_G0018808.1 mouse_genomes_project 11 103753949 103762788 - Epn3 protein_coding processed_transcript MGP_NODShiLtJ_T0031501.1 MGP_NODShiLtJ_G0018808.1 mouse_genomes_project 11 103753987 103762731 - MGP_NODShiLtJ_P0031501 Epn3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031502.1 MGP_NODShiLtJ_G0018808.1 mouse_genomes_project 11 103758839 103761088 - Epn3 protein_coding processed_transcript MGP_NODShiLtJ_T0031503.1 MGP_NODShiLtJ_G0018808.1 mouse_genomes_project 11 103759203 103761999 - Epn3 protein_coding processed_transcript MGP_NODShiLtJ_T0012474.1 MGP_NODShiLtJ_G0010582.1 mouse_genomes_project 11 55544772 55548101 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030720.1 MGP_NODShiLtJ_G0018611.1 mouse_genomes_project 11 85529116 85594213 + MGP_NODShiLtJ_P0030720 Fam222b protein_coding protein_coding MGP_NODShiLtJ_T0030721.1 MGP_NODShiLtJ_G0018611.1 mouse_genomes_project 11 85529164 85593588 + MGP_NODShiLtJ_P0030721 Fam222b protein_coding protein_coding MGP_NODShiLtJ_T0030722.1 MGP_NODShiLtJ_G0018611.1 mouse_genomes_project 11 85552440 85594213 + MGP_NODShiLtJ_P0030722 Fam222b protein_coding protein_coding MGP_NODShiLtJ_T0030016.1 MGP_NODShiLtJ_G0018440.1 mouse_genomes_project 11 76855367 76863565 - MGP_NODShiLtJ_P0030016 Alox15 protein_coding protein_coding MGP_NODShiLtJ_T0030017.1 MGP_NODShiLtJ_G0018440.1 mouse_genomes_project 11 76855429 76856521 - Alox15 protein_coding processed_transcript MGP_NODShiLtJ_T0031062.1 MGP_NODShiLtJ_G0018708.1 mouse_genomes_project 11 91599496 91601830 + MGP_NODShiLtJ_P0031062 Wfdc18 protein_coding protein_coding MGP_NODShiLtJ_T0031063.1 MGP_NODShiLtJ_G0018708.1 mouse_genomes_project 11 91599604 91601821 + MGP_NODShiLtJ_P0031063 Wfdc18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031064.1 MGP_NODShiLtJ_G0018708.1 mouse_genomes_project 11 91599606 91601180 + Wfdc18 protein_coding retained_intron MGP_NODShiLtJ_T0017121.1 MGP_NODShiLtJ_G0015070.1 mouse_genomes_project 11 106612987 106618720 - Gm11532 processed_transcript processed_transcript MGP_NODShiLtJ_T0032117.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110426372 110445132 - MGP_NODShiLtJ_P0032117 Nt5c3b protein_coding protein_coding MGP_NODShiLtJ_T0032118.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110426372 110445869 - MGP_NODShiLtJ_P0032118 Nt5c3b protein_coding protein_coding MGP_NODShiLtJ_T0032120.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110433880 110445098 - MGP_NODShiLtJ_P0032120 Nt5c3b protein_coding protein_coding MGP_NODShiLtJ_T0032121.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110433947 110435610 - Nt5c3b protein_coding processed_transcript MGP_NODShiLtJ_T0032122.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110436989 110444959 - Nt5c3b protein_coding processed_transcript MGP_NODShiLtJ_T0032123.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110437026 110445116 - Nt5c3b protein_coding processed_transcript MGP_NODShiLtJ_T0032124.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110437776 110445059 - Nt5c3b protein_coding processed_transcript MGP_NODShiLtJ_T0032125.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110442334 110444972 - Nt5c3b protein_coding processed_transcript MGP_NODShiLtJ_T0032126.1 MGP_NODShiLtJ_G0019008.1 mouse_genomes_project 11 110443595 110444970 - Nt5c3b protein_coding processed_transcript MGP_NODShiLtJ_T0032657.1 MGP_NODShiLtJ_G0019112.1 mouse_genomes_project 11 113492639 113496581 - MGP_NODShiLtJ_P0032657 1700023F06Rik protein_coding protein_coding MGP_NODShiLtJ_T0032658.1 MGP_NODShiLtJ_G0019112.1 mouse_genomes_project 11 113492652 113506709 - MGP_NODShiLtJ_P0032658 1700023F06Rik protein_coding protein_coding MGP_NODShiLtJ_T0032659.1 MGP_NODShiLtJ_G0019112.1 mouse_genomes_project 11 113493124 113506683 - MGP_NODShiLtJ_P0032659 1700023F06Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032660.1 MGP_NODShiLtJ_G0019112.1 mouse_genomes_project 11 113494033 113506684 - MGP_NODShiLtJ_P0032660 1700023F06Rik protein_coding protein_coding MGP_NODShiLtJ_T0032661.1 MGP_NODShiLtJ_G0019112.1 mouse_genomes_project 11 113494412 113506709 - 1700023F06Rik protein_coding retained_intron MGP_NODShiLtJ_T0003292.1 MGP_NODShiLtJ_G0003033.1 mouse_genomes_project 11 128240391 128248232 + Gm11739 antisense antisense MGP_NODShiLtJ_T0029050.1 MGP_NODShiLtJ_G0018221.1 mouse_genomes_project 11 64095573 64096494 + MGP_NODShiLtJ_P0029050 Olfr319 protein_coding protein_coding MGP_NODShiLtJ_T0032764.1 MGP_NODShiLtJ_G0019137.1 mouse_genomes_project 11 115797636 115835723 + Mrc2 protein_coding processed_transcript MGP_NODShiLtJ_T0032765.1 MGP_NODShiLtJ_G0019137.1 mouse_genomes_project 11 115797639 115864658 + MGP_NODShiLtJ_P0032765 Mrc2 protein_coding protein_coding MGP_NODShiLtJ_T0032766.1 MGP_NODShiLtJ_G0019137.1 mouse_genomes_project 11 115797661 115857391 + MGP_NODShiLtJ_P0032766 Mrc2 protein_coding protein_coding MGP_NODShiLtJ_T0032767.1 MGP_NODShiLtJ_G0019137.1 mouse_genomes_project 11 115837881 115841129 + Mrc2 protein_coding processed_transcript MGP_NODShiLtJ_T0032768.1 MGP_NODShiLtJ_G0019137.1 mouse_genomes_project 11 115854199 115856512 + Mrc2 protein_coding retained_intron MGP_NODShiLtJ_T0030947.1 MGP_NODShiLtJ_G0018666.1 mouse_genomes_project 11 88515787 88528015 + MGP_NODShiLtJ_P0030947 Spaca3 protein_coding protein_coding MGP_NODShiLtJ_T0030948.1 MGP_NODShiLtJ_G0018666.1 mouse_genomes_project 11 88515794 88528019 + MGP_NODShiLtJ_P0030948 Spaca3 protein_coding protein_coding MGP_NODShiLtJ_T0027537.1 MGP_NODShiLtJ_G0017829.1 mouse_genomes_project 11 984791 997596 + MGP_NODShiLtJ_P0027537 Sec14l3 protein_coding protein_coding MGP_NODShiLtJ_T0027538.1 MGP_NODShiLtJ_G0017829.1 mouse_genomes_project 11 984841 989410 + Sec14l3 protein_coding retained_intron MGP_NODShiLtJ_T0027539.1 MGP_NODShiLtJ_G0017829.1 mouse_genomes_project 11 984902 996185 + Sec14l3 protein_coding processed_transcript MGP_NODShiLtJ_T0027540.1 MGP_NODShiLtJ_G0017829.1 mouse_genomes_project 11 984902 996185 + Sec14l3 protein_coding processed_transcript MGP_NODShiLtJ_T0027541.1 MGP_NODShiLtJ_G0017829.1 mouse_genomes_project 11 991370 996621 + Sec14l3 protein_coding processed_transcript MGP_NODShiLtJ_T0030608.1 MGP_NODShiLtJ_G0018590.1 mouse_genomes_project 11 84277086 84313383 + MGP_NODShiLtJ_P0030608 Slc6a4 protein_coding protein_coding MGP_NODShiLtJ_T0030609.1 MGP_NODShiLtJ_G0018590.1 mouse_genomes_project 11 84277099 84313384 + MGP_NODShiLtJ_P0030609 Slc6a4 protein_coding protein_coding MGP_NODShiLtJ_T0030610.1 MGP_NODShiLtJ_G0018590.1 mouse_genomes_project 11 84288845 84292617 + MGP_NODShiLtJ_P0030610 Slc6a4 protein_coding protein_coding MGP_NODShiLtJ_T0030611.1 MGP_NODShiLtJ_G0018590.1 mouse_genomes_project 11 84298523 84302587 + Slc6a4 protein_coding retained_intron MGP_NODShiLtJ_T0029217.1 MGP_NODShiLtJ_G0018269.1 mouse_genomes_project 11 66027504 66034823 + Drg2 protein_coding retained_intron MGP_NODShiLtJ_T0029218.1 MGP_NODShiLtJ_G0018269.1 mouse_genomes_project 11 66027504 66041212 + MGP_NODShiLtJ_P0029218 Drg2 protein_coding protein_coding MGP_NODShiLtJ_T0029219.1 MGP_NODShiLtJ_G0018269.1 mouse_genomes_project 11 66027537 66035621 + Drg2 protein_coding retained_intron MGP_NODShiLtJ_T0029220.1 MGP_NODShiLtJ_G0018269.1 mouse_genomes_project 11 66032399 66033305 + Drg2 protein_coding retained_intron MGP_NODShiLtJ_T0029221.1 MGP_NODShiLtJ_G0018269.1 mouse_genomes_project 11 66034476 66036016 + Drg2 protein_coding retained_intron MGP_NODShiLtJ_T0031679.1 MGP_NODShiLtJ_G0018861.1 mouse_genomes_project 11 106340491 106350446 - MGP_NODShiLtJ_P0031679 Snx11 protein_coding protein_coding MGP_NODShiLtJ_T0031680.1 MGP_NODShiLtJ_G0018861.1 mouse_genomes_project 11 106340813 106350474 - MGP_NODShiLtJ_P0031680 Snx11 protein_coding protein_coding MGP_NODShiLtJ_T0031681.1 MGP_NODShiLtJ_G0018861.1 mouse_genomes_project 11 106342827 106350407 - MGP_NODShiLtJ_P0031681 Snx11 protein_coding protein_coding MGP_NODShiLtJ_T0031682.1 MGP_NODShiLtJ_G0018861.1 mouse_genomes_project 11 106343034 106343987 - Snx11 protein_coding processed_transcript MGP_NODShiLtJ_T0031683.1 MGP_NODShiLtJ_G0018861.1 mouse_genomes_project 11 106345473 106347557 - Snx11 protein_coding processed_transcript MGP_NODShiLtJ_T0031684.1 MGP_NODShiLtJ_G0018861.1 mouse_genomes_project 11 106349214 106350435 - Snx11 protein_coding processed_transcript MGP_NODShiLtJ_T0003138.1 MGP_NODShiLtJ_G0002908.1 mouse_genomes_project 11 67183749 67184423 - B9d1os antisense antisense MGP_NODShiLtJ_T0003084.1 MGP_NODShiLtJ_G0002860.1 mouse_genomes_project 11 24375418 24387631 - 4930538E20Rik antisense antisense MGP_NODShiLtJ_T0003085.1 MGP_NODShiLtJ_G0002860.1 mouse_genomes_project 11 24381763 24387588 - 4930538E20Rik antisense antisense MGP_NODShiLtJ_T0031373.1 MGP_NODShiLtJ_G0018780.1 mouse_genomes_project 11 97475861 97509514 - MGP_NODShiLtJ_P0031373 Dgke protein_coding protein_coding MGP_NODShiLtJ_T0031374.1 MGP_NODShiLtJ_G0018780.1 mouse_genomes_project 11 97479723 97503441 - MGP_NODShiLtJ_P0031374 Dgke protein_coding protein_coding MGP_NODShiLtJ_T0031375.1 MGP_NODShiLtJ_G0018780.1 mouse_genomes_project 11 97481368 97503441 - MGP_NODShiLtJ_P0031375 Dgke protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032258.1 MGP_NODShiLtJ_G0019038.1 mouse_genomes_project 11 111237063 111253154 + Cntnap1 protein_coding processed_transcript MGP_NODShiLtJ_T0032260.1 MGP_NODShiLtJ_G0019038.1 mouse_genomes_project 11 111250910 111267323 + MGP_NODShiLtJ_P0032260 Cntnap1 protein_coding protein_coding MGP_NODShiLtJ_T0033821.1 MGP_NODShiLtJ_G0019356.1 mouse_genomes_project 11 132567908 132572137 + MGP_NODShiLtJ_P0033821 Tspan10 protein_coding protein_coding MGP_NODShiLtJ_T0033822.1 MGP_NODShiLtJ_G0019356.1 mouse_genomes_project 11 132567935 132569570 + Tspan10 protein_coding processed_transcript MGP_NODShiLtJ_T0006113.1 MGP_NODShiLtJ_G0005101.1 mouse_genomes_project 11 17859348 17885261 - Gm12022 lincRNA lincRNA MGP_NODShiLtJ_T0101578.1 MGP_NODShiLtJ_G0039748.1 mouse_genomes_project 11 134087086 134093333 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0032371.1 MGP_NODShiLtJ_G0019061.1 mouse_genomes_project 11 111733203 111742729 + MGP_NODShiLtJ_P0032371 Tmem106a protein_coding protein_coding MGP_NODShiLtJ_T0032372.1 MGP_NODShiLtJ_G0019061.1 mouse_genomes_project 11 111733203 111742729 + MGP_NODShiLtJ_P0032372 Tmem106a protein_coding protein_coding MGP_NODShiLtJ_T0032373.1 MGP_NODShiLtJ_G0019061.1 mouse_genomes_project 11 111733205 111740375 + Tmem106a protein_coding processed_transcript MGP_NODShiLtJ_T0032374.1 MGP_NODShiLtJ_G0019061.1 mouse_genomes_project 11 111733218 111739881 + MGP_NODShiLtJ_P0032374 Tmem106a protein_coding protein_coding MGP_NODShiLtJ_T0032375.1 MGP_NODShiLtJ_G0019061.1 mouse_genomes_project 11 111733261 111739836 + MGP_NODShiLtJ_P0032375 Tmem106a protein_coding protein_coding MGP_NODShiLtJ_T0032376.1 MGP_NODShiLtJ_G0019061.1 mouse_genomes_project 11 111736888 111741707 + Tmem106a protein_coding processed_transcript MGP_NODShiLtJ_T0031601.1 MGP_NODShiLtJ_G0018836.1 mouse_genomes_project 11 105108807 105127558 + MGP_NODShiLtJ_P0031601 Phb protein_coding protein_coding MGP_NODShiLtJ_T0031602.1 MGP_NODShiLtJ_G0018836.1 mouse_genomes_project 11 105108843 105113480 + Phb protein_coding processed_transcript MGP_NODShiLtJ_T0031603.1 MGP_NODShiLtJ_G0018836.1 mouse_genomes_project 11 105108853 105110458 + Phb protein_coding processed_transcript MGP_NODShiLtJ_T0031604.1 MGP_NODShiLtJ_G0018836.1 mouse_genomes_project 11 105108907 105126493 + MGP_NODShiLtJ_P0031604 Phb protein_coding protein_coding MGP_NODShiLtJ_T0031605.1 MGP_NODShiLtJ_G0018836.1 mouse_genomes_project 11 105113287 105123574 + Phb protein_coding processed_transcript MGP_NODShiLtJ_T0012440.1 MGP_NODShiLtJ_G0010548.1 mouse_genomes_project 11 35232758 35233146 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006150.1 MGP_NODShiLtJ_G0005131.1 mouse_genomes_project 11 34548055 34549019 - 4930555O08Rik lincRNA lincRNA MGP_NODShiLtJ_T0098686.1 MGP_NODShiLtJ_G0037080.1 mouse_genomes_project 11 66350080 66350177 + Gm23341 snRNA snRNA MGP_NODShiLtJ_T0031638.1 MGP_NODShiLtJ_G0018846.1 mouse_genomes_project 11 105547049 105568769 - MGP_NODShiLtJ_P0031638 Ube2z protein_coding protein_coding MGP_NODShiLtJ_T0011205.1 MGP_NODShiLtJ_G0009338.1 mouse_genomes_project 11 115627304 115627400 + Gm24290 misc_RNA misc_RNA MGP_NODShiLtJ_T0028200.1 MGP_NODShiLtJ_G0017978.1 mouse_genomes_project 11 33317054 33324419 - MGP_NODShiLtJ_P0028200 Bod1 protein_coding protein_coding MGP_NODShiLtJ_T0028201.1 MGP_NODShiLtJ_G0017978.1 mouse_genomes_project 11 33318358 33324258 - MGP_NODShiLtJ_P0028201 Bod1 protein_coding protein_coding MGP_NODShiLtJ_T0003207.1 MGP_NODShiLtJ_G0002965.1 mouse_genomes_project 11 97507416 97511749 + Dgkeos antisense antisense MGP_NODShiLtJ_T0003208.1 MGP_NODShiLtJ_G0002965.1 mouse_genomes_project 11 97508753 97511749 + Dgkeos antisense antisense MGP_NODShiLtJ_T0003209.1 MGP_NODShiLtJ_G0002965.1 mouse_genomes_project 11 97508927 97510532 + Dgkeos antisense antisense MGP_NODShiLtJ_T0003210.1 MGP_NODShiLtJ_G0002965.1 mouse_genomes_project 11 97508931 97510532 + Dgkeos antisense antisense MGP_NODShiLtJ_T0029131.1 MGP_NODShiLtJ_G0018253.1 mouse_genomes_project 11 65085010 65086129 - MGP_NODShiLtJ_P0029131 Olfr222 protein_coding protein_coding MGP_NODShiLtJ_T0028859.1 MGP_NODShiLtJ_G0018161.1 mouse_genomes_project 11 58907220 58907764 - MGP_NODShiLtJ_P0028859 protein_coding protein_coding MGP_NODShiLtJ_T0032177.1 MGP_NODShiLtJ_G0019020.1 mouse_genomes_project 11 110734814 110758821 - MGP_NODShiLtJ_P0032177 Rab5c protein_coding protein_coding MGP_NODShiLtJ_T0032178.1 MGP_NODShiLtJ_G0019020.1 mouse_genomes_project 11 110734816 110758821 - MGP_NODShiLtJ_P0032178 Rab5c protein_coding protein_coding MGP_NODShiLtJ_T0032179.1 MGP_NODShiLtJ_G0019020.1 mouse_genomes_project 11 110738305 110750821 - MGP_NODShiLtJ_P0032179 Rab5c protein_coding protein_coding MGP_NODShiLtJ_T0032180.1 MGP_NODShiLtJ_G0019020.1 mouse_genomes_project 11 110740582 110758782 - MGP_NODShiLtJ_P0032180 Rab5c protein_coding protein_coding MGP_NODShiLtJ_T0027906.1 MGP_NODShiLtJ_G0017912.1 mouse_genomes_project 11 16319329 16322745 + MGP_NODShiLtJ_P0027906 Cnrip1 protein_coding protein_coding MGP_NODShiLtJ_T0027907.1 MGP_NODShiLtJ_G0017912.1 mouse_genomes_project 11 16319546 16321983 + Cnrip1 protein_coding retained_intron MGP_NODShiLtJ_T0027908.1 MGP_NODShiLtJ_G0017912.1 mouse_genomes_project 11 16319561 16349718 + MGP_NODShiLtJ_P0027908 Cnrip1 protein_coding protein_coding MGP_NODShiLtJ_T0009571.1 MGP_NODShiLtJ_G0007704.1 mouse_genomes_project 11 29995542 29995611 - Mir216c miRNA miRNA MGP_NODShiLtJ_T0009578.1 MGP_NODShiLtJ_G0007711.1 mouse_genomes_project 11 48317243 48317288 + Gm22121 miRNA miRNA MGP_NODShiLtJ_T0029664.1 MGP_NODShiLtJ_G0018365.1 mouse_genomes_project 11 75423985 75426210 + MGP_NODShiLtJ_P0029664 Tmem107 protein_coding protein_coding MGP_NODShiLtJ_T0029665.1 MGP_NODShiLtJ_G0018365.1 mouse_genomes_project 11 75423990 75426473 + MGP_NODShiLtJ_P0029665 Tmem107 protein_coding protein_coding MGP_NODShiLtJ_T0029666.1 MGP_NODShiLtJ_G0018365.1 mouse_genomes_project 11 75423992 75426003 + Tmem107 protein_coding processed_transcript MGP_NODShiLtJ_T0029667.1 MGP_NODShiLtJ_G0018365.1 mouse_genomes_project 11 75424033 75424683 + Tmem107 protein_coding processed_transcript MGP_NODShiLtJ_T0029668.1 MGP_NODShiLtJ_G0018365.1 mouse_genomes_project 11 75424052 75426441 + Tmem107 protein_coding processed_transcript MGP_NODShiLtJ_T0029669.1 MGP_NODShiLtJ_G0018365.1 mouse_genomes_project 11 75424097 75426204 + Tmem107 protein_coding processed_transcript MGP_NODShiLtJ_T0029670.1 MGP_NODShiLtJ_G0018365.1 mouse_genomes_project 11 75424115 75425996 + Tmem107 protein_coding processed_transcript MGP_NODShiLtJ_T0029671.1 MGP_NODShiLtJ_G0018365.1 mouse_genomes_project 11 75424481 75425740 + Tmem107 protein_coding processed_transcript MGP_NODShiLtJ_T0032981.1 MGP_NODShiLtJ_G0019186.1 mouse_genomes_project 11 120349764 120357143 + MGP_NODShiLtJ_P0032981 9930022D16Rik protein_coding protein_coding MGP_NODShiLtJ_T0012447.1 MGP_NODShiLtJ_G0010555.1 mouse_genomes_project 11 43448284 43448803 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006148.1 MGP_NODShiLtJ_G0005129.1 mouse_genomes_project 11 33491601 33497168 + Gm12107 lincRNA lincRNA MGP_NODShiLtJ_T0099956.1 MGP_NODShiLtJ_G0038350.1 mouse_genomes_project 11 107442067 107442162 - Gm27326 snoRNA snoRNA MGP_NODShiLtJ_T0031804.1 MGP_NODShiLtJ_G0018888.1 mouse_genomes_project 11 107370462 107400519 - MGP_NODShiLtJ_P0031804 Pip4k2b protein_coding protein_coding MGP_NODShiLtJ_T0031805.1 MGP_NODShiLtJ_G0018888.1 mouse_genomes_project 11 107375689 107382613 - Pip4k2b protein_coding processed_transcript MGP_NODShiLtJ_T0003285.1 MGP_NODShiLtJ_G0003027.1 mouse_genomes_project 11 120913923 120915743 + Gm11697 antisense antisense MGP_NODShiLtJ_T0032188.1 MGP_NODShiLtJ_G0019024.1 mouse_genomes_project 11 110802422 110845843 - MGP_NODShiLtJ_P0032188 Stat5b protein_coding protein_coding MGP_NODShiLtJ_T0032189.1 MGP_NODShiLtJ_G0019024.1 mouse_genomes_project 11 110802422 110874596 - MGP_NODShiLtJ_P0032189 Stat5b protein_coding protein_coding MGP_NODShiLtJ_T0032190.1 MGP_NODShiLtJ_G0019024.1 mouse_genomes_project 11 110821068 110874410 - Stat5b protein_coding processed_transcript MGP_NODShiLtJ_T0030691.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85354194 85402010 + MGP_NODShiLtJ_P0030691 Sez6 protein_coding protein_coding MGP_NODShiLtJ_T0030692.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85354233 85402010 + Sez6 protein_coding retained_intron MGP_NODShiLtJ_T0030693.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85354311 85387123 + Sez6 protein_coding retained_intron MGP_NODShiLtJ_T0030694.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85354406 85402002 + MGP_NODShiLtJ_P0030694 Sez6 protein_coding protein_coding MGP_NODShiLtJ_T0030695.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85354433 85401023 + Sez6 protein_coding retained_intron MGP_NODShiLtJ_T0030696.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85374489 85377932 + Sez6 protein_coding processed_transcript MGP_NODShiLtJ_T0030697.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85377022 85402010 + MGP_NODShiLtJ_P0030697 Sez6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030698.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85391970 85397450 + MGP_NODShiLtJ_P0030698 Sez6 protein_coding protein_coding MGP_NODShiLtJ_T0030699.1 MGP_NODShiLtJ_G0018606.1 mouse_genomes_project 11 85396134 85397336 + Sez6 protein_coding retained_intron MGP_NODShiLtJ_T0009684.1 MGP_NODShiLtJ_G0007817.1 mouse_genomes_project 11 132370942 132371080 + miRNA miRNA MGP_NODShiLtJ_T0003180.1 MGP_NODShiLtJ_G0002944.1 mouse_genomes_project 11 86525076 86532564 + Gm11201 antisense antisense MGP_NODShiLtJ_T0028971.1 MGP_NODShiLtJ_G0018187.1 mouse_genomes_project 11 61154580 61174045 - MGP_NODShiLtJ_P0028971 Nmur2 protein_coding protein_coding MGP_NODShiLtJ_T0029227.1 MGP_NODShiLtJ_G0018271.1 mouse_genomes_project 11 66114423 66132474 + Alkbh5 protein_coding processed_transcript MGP_NODShiLtJ_T0029228.1 MGP_NODShiLtJ_G0018271.1 mouse_genomes_project 11 66116020 66136556 + MGP_NODShiLtJ_P0029228 Alkbh5 protein_coding protein_coding MGP_NODShiLtJ_T0032437.1 MGP_NODShiLtJ_G0019075.1 mouse_genomes_project 11 112365856 112369804 + Nags protein_coding processed_transcript MGP_NODShiLtJ_T0032438.1 MGP_NODShiLtJ_G0019075.1 mouse_genomes_project 11 112365892 112369804 + MGP_NODShiLtJ_P0032438 Nags protein_coding protein_coding MGP_NODShiLtJ_T0032439.1 MGP_NODShiLtJ_G0019075.1 mouse_genomes_project 11 112366697 112369804 + Nags protein_coding processed_transcript MGP_NODShiLtJ_T0030901.1 MGP_NODShiLtJ_G0018657.1 mouse_genomes_project 11 87760160 87777474 + MGP_NODShiLtJ_P0030901 Rnf135 protein_coding protein_coding MGP_NODShiLtJ_T0030902.1 MGP_NODShiLtJ_G0018657.1 mouse_genomes_project 11 87760532 87767773 + Rnf135 protein_coding processed_transcript MGP_NODShiLtJ_T0033610.1 MGP_NODShiLtJ_G0019314.1 mouse_genomes_project 11 129787650 129794236 + MGP_NODShiLtJ_P0033610 Tmem235 protein_coding protein_coding MGP_NODShiLtJ_T0012469.1 MGP_NODShiLtJ_G0010577.1 mouse_genomes_project 11 53818017 53818929 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098681.1 MGP_NODShiLtJ_G0037075.1 mouse_genomes_project 11 56665767 56665875 + Gm26061 snRNA snRNA MGP_NODShiLtJ_T0006152.1 MGP_NODShiLtJ_G0005133.1 mouse_genomes_project 11 34872349 34875795 + lincRNA lincRNA MGP_NODShiLtJ_T0003164.1 MGP_NODShiLtJ_G0002930.1 mouse_genomes_project 11 75410902 75413666 - 9330160F10Rik antisense antisense MGP_NODShiLtJ_T0029696.1 MGP_NODShiLtJ_G0018373.1 mouse_genomes_project 11 75581963 75600833 - MGP_NODShiLtJ_P0029696 Gucy2e protein_coding protein_coding MGP_NODShiLtJ_T0029697.1 MGP_NODShiLtJ_G0018373.1 mouse_genomes_project 11 75581966 75600833 - MGP_NODShiLtJ_P0029697 Gucy2e protein_coding protein_coding MGP_NODShiLtJ_T0029698.1 MGP_NODShiLtJ_G0018373.1 mouse_genomes_project 11 75585004 75600848 - MGP_NODShiLtJ_P0029698 Gucy2e protein_coding protein_coding MGP_NODShiLtJ_T0029699.1 MGP_NODShiLtJ_G0018373.1 mouse_genomes_project 11 75590479 75600833 - Gucy2e protein_coding processed_transcript MGP_NODShiLtJ_T0003181.1 MGP_NODShiLtJ_G0002945.1 mouse_genomes_project 11 86983140 86985453 - AU040972 antisense antisense MGP_NODShiLtJ_T0031618.1 MGP_NODShiLtJ_G0018841.1 mouse_genomes_project 11 105300338 105308873 + MGP_NODShiLtJ_P0031618 Gngt2 protein_coding protein_coding MGP_NODShiLtJ_T0031619.1 MGP_NODShiLtJ_G0018841.1 mouse_genomes_project 11 105305433 105308873 + MGP_NODShiLtJ_P0031619 Gngt2 protein_coding protein_coding MGP_NODShiLtJ_T0031620.1 MGP_NODShiLtJ_G0018841.1 mouse_genomes_project 11 105305447 105308873 + MGP_NODShiLtJ_P0031620 Gngt2 protein_coding protein_coding MGP_NODShiLtJ_T0031621.1 MGP_NODShiLtJ_G0018841.1 mouse_genomes_project 11 105305806 105308873 + MGP_NODShiLtJ_P0031621 Gngt2 protein_coding protein_coding MGP_NODShiLtJ_T0031622.1 MGP_NODShiLtJ_G0018841.1 mouse_genomes_project 11 105305808 105308873 + MGP_NODShiLtJ_P0031622 Gngt2 protein_coding protein_coding MGP_NODShiLtJ_T0031623.1 MGP_NODShiLtJ_G0018841.1 mouse_genomes_project 11 105306370 105308873 + MGP_NODShiLtJ_P0031623 Gngt2 protein_coding protein_coding MGP_NODShiLtJ_T0031624.1 MGP_NODShiLtJ_G0018841.1 mouse_genomes_project 11 105306747 105308873 + MGP_NODShiLtJ_P0031624 Gngt2 protein_coding protein_coding MGP_NODShiLtJ_T0031875.1 MGP_NODShiLtJ_G0018903.1 mouse_genomes_project 11 108054959 108059195 - MGP_NODShiLtJ_P0031875 Neurod2 protein_coding protein_coding MGP_NODShiLtJ_T0028559.1 MGP_NODShiLtJ_G0018080.1 mouse_genomes_project 11 53857165 53858238 + MGP_NODShiLtJ_P0028559 Olfr1389 protein_coding protein_coding MGP_NODShiLtJ_T0101271.1 MGP_NODShiLtJ_G0039549.1 mouse_genomes_project 11 80215405 80220271 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101272.1 MGP_NODShiLtJ_G0039549.1 mouse_genomes_project 11 80215607 80223282 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101273.1 MGP_NODShiLtJ_G0039549.1 mouse_genomes_project 11 80215869 80223314 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0003260.1 MGP_NODShiLtJ_G0003007.1 mouse_genomes_project 11 115665194 115668840 - 1700052K11Rik antisense antisense MGP_NODShiLtJ_T0011186.1 MGP_NODShiLtJ_G0009319.1 mouse_genomes_project 11 20883908 20884176 - Gm22600 misc_RNA misc_RNA MGP_NODShiLtJ_T0012412.1 MGP_NODShiLtJ_G0010520.1 mouse_genomes_project 11 27430104 27430628 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006161.1 MGP_NODShiLtJ_G0005142.1 mouse_genomes_project 11 47088385 47090099 + Gm12148 lincRNA lincRNA MGP_NODShiLtJ_T0000826.1 MGP_NODShiLtJ_G0000756.1 mouse_genomes_project 11 48467753 48475356 - TEC TEC MGP_NODShiLtJ_T0009593.1 MGP_NODShiLtJ_G0007726.1 mouse_genomes_project 11 64838173 64838269 - Gm24756 miRNA miRNA MGP_NODShiLtJ_T0033036.1 MGP_NODShiLtJ_G0019199.1 mouse_genomes_project 11 121443849 121566945 + MGP_NODShiLtJ_P0033036 Map2k6 protein_coding protein_coding MGP_NODShiLtJ_T0033037.1 MGP_NODShiLtJ_G0019199.1 mouse_genomes_project 11 121443849 121578820 + MGP_NODShiLtJ_P0033037 Map2k6 protein_coding protein_coding MGP_NODShiLtJ_T0033038.1 MGP_NODShiLtJ_G0019199.1 mouse_genomes_project 11 121443986 121566945 + Map2k6 protein_coding processed_transcript MGP_NODShiLtJ_T0033039.1 MGP_NODShiLtJ_G0019199.1 mouse_genomes_project 11 121528015 121552859 + Map2k6 protein_coding processed_transcript MGP_NODShiLtJ_T0033040.1 MGP_NODShiLtJ_G0019199.1 mouse_genomes_project 11 121531204 121551264 + Map2k6 protein_coding processed_transcript MGP_NODShiLtJ_T0033041.1 MGP_NODShiLtJ_G0019199.1 mouse_genomes_project 11 121531349 121566171 + MGP_NODShiLtJ_P0033041 Map2k6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033042.1 MGP_NODShiLtJ_G0019199.1 mouse_genomes_project 11 121531355 121566171 + MGP_NODShiLtJ_P0033042 Map2k6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030326.1 MGP_NODShiLtJ_G0018507.1 mouse_genomes_project 11 80068265 80102792 + MGP_NODShiLtJ_P0030326 Trpv3 protein_coding protein_coding MGP_NODShiLtJ_T0032999.1 MGP_NODShiLtJ_G0019190.1 mouse_genomes_project 11 120522466 120565421 - MGP_NODShiLtJ_P0032999 Wipi1 protein_coding protein_coding MGP_NODShiLtJ_T0033000.1 MGP_NODShiLtJ_G0019190.1 mouse_genomes_project 11 120524258 120565421 - MGP_NODShiLtJ_P0033000 Wipi1 protein_coding protein_coding MGP_NODShiLtJ_T0033001.1 MGP_NODShiLtJ_G0019190.1 mouse_genomes_project 11 120531198 120565421 - MGP_NODShiLtJ_P0033001 Wipi1 protein_coding protein_coding MGP_NODShiLtJ_T0033002.1 MGP_NODShiLtJ_G0019190.1 mouse_genomes_project 11 120565227 120565956 - Wipi1 protein_coding processed_transcript MGP_NODShiLtJ_T0029264.1 MGP_NODShiLtJ_G0018281.1 mouse_genomes_project 11 66568275 66588999 + MGP_NODShiLtJ_P0029264 Map2k3 protein_coding protein_coding MGP_NODShiLtJ_T0029265.1 MGP_NODShiLtJ_G0018281.1 mouse_genomes_project 11 66568296 66583777 + Map2k3 protein_coding retained_intron MGP_NODShiLtJ_T0029266.1 MGP_NODShiLtJ_G0018281.1 mouse_genomes_project 11 66568296 66578291 + Map2k3 protein_coding retained_intron MGP_NODShiLtJ_T0029267.1 MGP_NODShiLtJ_G0018281.1 mouse_genomes_project 11 66568308 66588982 + MGP_NODShiLtJ_P0029267 Map2k3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029268.1 MGP_NODShiLtJ_G0018281.1 mouse_genomes_project 11 66578054 66582957 + Map2k3 protein_coding processed_transcript MGP_NODShiLtJ_T0029269.1 MGP_NODShiLtJ_G0018281.1 mouse_genomes_project 11 66586848 66588008 + Map2k3 protein_coding retained_intron MGP_NODShiLtJ_T0033062.1 MGP_NODShiLtJ_G0019205.1 mouse_genomes_project 11 125083308 125100007 + MGP_NODShiLtJ_P0033062 Cog1 protein_coding protein_coding MGP_NODShiLtJ_T0033063.1 MGP_NODShiLtJ_G0019205.1 mouse_genomes_project 11 125083467 125099219 + MGP_NODShiLtJ_P0033063 Cog1 protein_coding protein_coding MGP_NODShiLtJ_T0033064.1 MGP_NODShiLtJ_G0019205.1 mouse_genomes_project 11 125089560 125091128 + Cog1 protein_coding retained_intron MGP_NODShiLtJ_T0033065.1 MGP_NODShiLtJ_G0019205.1 mouse_genomes_project 11 125092253 125104114 + MGP_NODShiLtJ_P0033065 Cog1 protein_coding protein_coding MGP_NODShiLtJ_T0033066.1 MGP_NODShiLtJ_G0019205.1 mouse_genomes_project 11 125092390 125098449 + MGP_NODShiLtJ_P0033066 Cog1 protein_coding protein_coding MGP_NODShiLtJ_T0033067.1 MGP_NODShiLtJ_G0019205.1 mouse_genomes_project 11 125092408 125098485 + MGP_NODShiLtJ_P0033067 Cog1 protein_coding protein_coding MGP_NODShiLtJ_T0033068.1 MGP_NODShiLtJ_G0019205.1 mouse_genomes_project 11 125093756 125099220 + MGP_NODShiLtJ_P0033068 Cog1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033069.1 MGP_NODShiLtJ_G0019205.1 mouse_genomes_project 11 125094461 125099220 + MGP_NODShiLtJ_P0033069 Cog1 protein_coding protein_coding MGP_NODShiLtJ_T0029691.1 MGP_NODShiLtJ_G0018371.1 mouse_genomes_project 11 75515517 75531255 + MGP_NODShiLtJ_P0029691 Alox12b protein_coding protein_coding MGP_NODShiLtJ_T0012438.1 MGP_NODShiLtJ_G0010546.1 mouse_genomes_project 11 34823364 34824200 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028838.1 MGP_NODShiLtJ_G0018155.1 mouse_genomes_project 11 58616350 58621541 + MGP_NODShiLtJ_P0028838 Il5 protein_coding protein_coding MGP_NODShiLtJ_T0032130.1 MGP_NODShiLtJ_G0019011.1 mouse_genomes_project 11 110482215 110535038 - MGP_NODShiLtJ_P0032130 Acly protein_coding protein_coding MGP_NODShiLtJ_T0032131.1 MGP_NODShiLtJ_G0019011.1 mouse_genomes_project 11 110482218 110535038 - MGP_NODShiLtJ_P0032131 Acly protein_coding protein_coding MGP_NODShiLtJ_T0032132.1 MGP_NODShiLtJ_G0019011.1 mouse_genomes_project 11 110482220 110530636 - MGP_NODShiLtJ_P0032132 Acly protein_coding protein_coding MGP_NODShiLtJ_T0032133.1 MGP_NODShiLtJ_G0019011.1 mouse_genomes_project 11 110483088 110485414 - Acly protein_coding processed_transcript MGP_NODShiLtJ_T0032134.1 MGP_NODShiLtJ_G0019011.1 mouse_genomes_project 11 110489265 110501185 - Acly protein_coding processed_transcript MGP_NODShiLtJ_T0032135.1 MGP_NODShiLtJ_G0019011.1 mouse_genomes_project 11 110505284 110506135 - Acly protein_coding processed_transcript MGP_NODShiLtJ_T0032136.1 MGP_NODShiLtJ_G0019011.1 mouse_genomes_project 11 110507615 110534907 - MGP_NODShiLtJ_P0032136 Acly protein_coding protein_coding MGP_NODShiLtJ_T0030046.1 MGP_NODShiLtJ_G0018448.1 mouse_genomes_project 11 77062247 77063788 + MGP_NODShiLtJ_P0030046 Gltpd2 protein_coding protein_coding MGP_NODShiLtJ_T0030047.1 MGP_NODShiLtJ_G0018448.1 mouse_genomes_project 11 77062690 77063571 + MGP_NODShiLtJ_P0030047 Gltpd2 protein_coding protein_coding MGP_NODShiLtJ_T0033589.1 MGP_NODShiLtJ_G0019308.1 mouse_genomes_project 11 129720284 129729921 + MGP_NODShiLtJ_P0033589 6030468B19Rik protein_coding protein_coding MGP_NODShiLtJ_T0030567.1 MGP_NODShiLtJ_G0018580.1 mouse_genomes_project 11 83463864 83470769 + MGP_NODShiLtJ_P0030567 Rnmtl1 protein_coding protein_coding MGP_NODShiLtJ_T0030568.1 MGP_NODShiLtJ_G0018580.1 mouse_genomes_project 11 83463885 83465034 + Rnmtl1 protein_coding retained_intron MGP_NODShiLtJ_T0030569.1 MGP_NODShiLtJ_G0018580.1 mouse_genomes_project 11 83469361 83470658 + Rnmtl1 protein_coding processed_transcript MGP_NODShiLtJ_T0029807.1 MGP_NODShiLtJ_G0018397.1 mouse_genomes_project 11 76089813 76092522 - MGP_NODShiLtJ_P0029807 Tnfsf13 protein_coding protein_coding MGP_NODShiLtJ_T0029808.1 MGP_NODShiLtJ_G0018397.1 mouse_genomes_project 11 76089899 76092752 - MGP_NODShiLtJ_P0029808 Tnfsf13 protein_coding protein_coding MGP_NODShiLtJ_T0030245.1 MGP_NODShiLtJ_G0018487.1 mouse_genomes_project 11 79165248 79167806 + MGP_NODShiLtJ_P0030245 Ggt6 protein_coding protein_coding MGP_NODShiLtJ_T0030246.1 MGP_NODShiLtJ_G0018487.1 mouse_genomes_project 11 79165253 79168205 + MGP_NODShiLtJ_P0030246 Ggt6 protein_coding protein_coding MGP_NODShiLtJ_T0028468.1 MGP_NODShiLtJ_G0018051.1 mouse_genomes_project 11 50512424 50527805 + MGP_NODShiLtJ_P0028468 Gm12169 protein_coding protein_coding MGP_NODShiLtJ_T0012460.1 MGP_NODShiLtJ_G0010568.1 mouse_genomes_project 11 49970972 49971314 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033226.1 MGP_NODShiLtJ_G0019246.1 mouse_genomes_project 11 127170429 127185722 + MGP_NODShiLtJ_P0033226 Armc7 protein_coding protein_coding MGP_NODShiLtJ_T0033227.1 MGP_NODShiLtJ_G0019246.1 mouse_genomes_project 11 127170460 127179145 + Armc7 protein_coding processed_transcript MGP_NODShiLtJ_T0033228.1 MGP_NODShiLtJ_G0019246.1 mouse_genomes_project 11 127170504 127180654 + Armc7 protein_coding processed_transcript MGP_NODShiLtJ_T0033229.1 MGP_NODShiLtJ_G0019246.1 mouse_genomes_project 11 127170716 127184317 + Armc7 protein_coding processed_transcript MGP_NODShiLtJ_T0033145.1 MGP_NODShiLtJ_G0019229.1 mouse_genomes_project 11 126783836 126801405 - MGP_NODShiLtJ_P0033145 Cd300lf protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033146.1 MGP_NODShiLtJ_G0019229.1 mouse_genomes_project 11 126783839 126801516 - MGP_NODShiLtJ_P0033146 Cd300lf protein_coding protein_coding MGP_NODShiLtJ_T0033147.1 MGP_NODShiLtJ_G0019229.1 mouse_genomes_project 11 126783839 126801516 - MGP_NODShiLtJ_P0033147 Cd300lf protein_coding protein_coding MGP_NODShiLtJ_T0033148.1 MGP_NODShiLtJ_G0019229.1 mouse_genomes_project 11 126783839 126801516 - MGP_NODShiLtJ_P0033148 Cd300lf protein_coding protein_coding MGP_NODShiLtJ_T0033149.1 MGP_NODShiLtJ_G0019229.1 mouse_genomes_project 11 126786447 126801515 - Cd300lf protein_coding processed_transcript MGP_NODShiLtJ_T0033150.1 MGP_NODShiLtJ_G0019229.1 mouse_genomes_project 11 126787860 126794458 - Cd300lf protein_coding processed_transcript MGP_NODShiLtJ_T0033151.1 MGP_NODShiLtJ_G0019229.1 mouse_genomes_project 11 126787944 126794405 - Cd300lf protein_coding processed_transcript MGP_NODShiLtJ_T0033152.1 MGP_NODShiLtJ_G0019229.1 mouse_genomes_project 11 126787956 126794399 - Cd300lf protein_coding processed_transcript MGP_NODShiLtJ_T0006193.1 MGP_NODShiLtJ_G0005172.1 mouse_genomes_project 11 70842288 70845440 - Gm12292 lincRNA lincRNA MGP_NODShiLtJ_T0006171.1 MGP_NODShiLtJ_G0005152.1 mouse_genomes_project 11 54755859 54809462 + Gm26542 lincRNA lincRNA MGP_NODShiLtJ_T0033826.1 MGP_NODShiLtJ_G0019358.1 mouse_genomes_project 11 132581616 132584108 - MGP_NODShiLtJ_P0033826 Oxld1 protein_coding protein_coding MGP_NODShiLtJ_T0033827.1 MGP_NODShiLtJ_G0019358.1 mouse_genomes_project 11 132581895 132583976 - MGP_NODShiLtJ_P0033827 Oxld1 protein_coding protein_coding MGP_NODShiLtJ_T0031625.1 MGP_NODShiLtJ_G0018842.1 mouse_genomes_project 11 105340080 105395216 - MGP_NODShiLtJ_P0031625 B4galnt2 protein_coding protein_coding MGP_NODShiLtJ_T0009589.1 MGP_NODShiLtJ_G0007722.1 mouse_genomes_project 11 58664583 58664641 - Mir7671 miRNA miRNA MGP_NODShiLtJ_T0006156.1 MGP_NODShiLtJ_G0005137.1 mouse_genomes_project 11 39705552 39725351 + lincRNA lincRNA MGP_NODShiLtJ_T0031666.1 MGP_NODShiLtJ_G0018859.1 mouse_genomes_project 11 105921398 105924728 + MGP_NODShiLtJ_P0031666 Hoxb1 protein_coding protein_coding MGP_NODShiLtJ_T0031667.1 MGP_NODShiLtJ_G0018859.1 mouse_genomes_project 11 105921904 105922868 + Hoxb1 protein_coding processed_transcript MGP_NODShiLtJ_T0030309.1 MGP_NODShiLtJ_G0018503.1 mouse_genomes_project 11 79968762 79976435 + MGP_NODShiLtJ_P0030309 Tax1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0030310.1 MGP_NODShiLtJ_G0018503.1 mouse_genomes_project 11 79968930 79974374 + Tax1bp3 protein_coding processed_transcript MGP_NODShiLtJ_T0030311.1 MGP_NODShiLtJ_G0018503.1 mouse_genomes_project 11 79968930 79977935 + Tax1bp3 protein_coding retained_intron MGP_NODShiLtJ_T0030312.1 MGP_NODShiLtJ_G0018503.1 mouse_genomes_project 11 79968949 79976330 + MGP_NODShiLtJ_P0030312 Tax1bp3 protein_coding protein_coding MGP_NODShiLtJ_T0034063.1 MGP_NODShiLtJ_G0019407.1 mouse_genomes_project 11 133720305 133729404 - MGP_NODShiLtJ_P0034063 Zfp750 protein_coding protein_coding MGP_NODShiLtJ_T0030734.1 MGP_NODShiLtJ_G0018614.1 mouse_genomes_project 11 85614053 85617823 + MGP_NODShiLtJ_P0030734 Tlcd1 protein_coding protein_coding MGP_NODShiLtJ_T0030735.1 MGP_NODShiLtJ_G0018614.1 mouse_genomes_project 11 85615472 85616965 + MGP_NODShiLtJ_P0030735 Tlcd1 protein_coding protein_coding MGP_NODShiLtJ_T0030736.1 MGP_NODShiLtJ_G0018614.1 mouse_genomes_project 11 85615491 85617497 + Tlcd1 protein_coding processed_transcript MGP_NODShiLtJ_T0030737.1 MGP_NODShiLtJ_G0018614.1 mouse_genomes_project 11 85615993 85619252 + MGP_NODShiLtJ_P0030737 Tlcd1 protein_coding protein_coding MGP_NODShiLtJ_T0030738.1 MGP_NODShiLtJ_G0018614.1 mouse_genomes_project 11 85616027 85618163 + MGP_NODShiLtJ_P0030738 Tlcd1 protein_coding protein_coding MGP_NODShiLtJ_T0030739.1 MGP_NODShiLtJ_G0018614.1 mouse_genomes_project 11 85616073 85616950 + Tlcd1 protein_coding retained_intron MGP_NODShiLtJ_T0030740.1 MGP_NODShiLtJ_G0018614.1 mouse_genomes_project 11 85616104 85617218 + MGP_NODShiLtJ_P0030740 Tlcd1 protein_coding protein_coding MGP_NODShiLtJ_T0030741.1 MGP_NODShiLtJ_G0018614.1 mouse_genomes_project 11 85616615 85617434 + Tlcd1 protein_coding retained_intron MGP_NODShiLtJ_T0101555.1 MGP_NODShiLtJ_G0039725.1 mouse_genomes_project 11 81299827 81326825 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006301.1 MGP_NODShiLtJ_G0005249.1 mouse_genomes_project 11 128875683 128881723 - Gm11728 lincRNA lincRNA MGP_NODShiLtJ_T0006302.1 MGP_NODShiLtJ_G0005249.1 mouse_genomes_project 11 128879971 128881718 - Gm11728 lincRNA lincRNA MGP_NODShiLtJ_T0017132.1 MGP_NODShiLtJ_G0015080.1 mouse_genomes_project 11 113564010 113566895 - 1700028N14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0030292.1 MGP_NODShiLtJ_G0018496.1 mouse_genomes_project 11 79781412 79797472 + MGP_NODShiLtJ_P0030292 P2rx1 protein_coding protein_coding MGP_NODShiLtJ_T0030293.1 MGP_NODShiLtJ_G0018496.1 mouse_genomes_project 11 79781624 79796398 + MGP_NODShiLtJ_P0030293 P2rx1 protein_coding protein_coding MGP_NODShiLtJ_T0030294.1 MGP_NODShiLtJ_G0018496.1 mouse_genomes_project 11 79792062 79797469 + P2rx1 protein_coding retained_intron MGP_NODShiLtJ_T0028957.1 MGP_NODShiLtJ_G0018182.1 mouse_genomes_project 11 60305900 60370266 - MGP_NODShiLtJ_P0028957 Fat2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033876.1 MGP_NODShiLtJ_G0019370.1 mouse_genomes_project 11 132733225 132742846 + MGP_NODShiLtJ_P0033876 Anapc11 protein_coding protein_coding MGP_NODShiLtJ_T0033877.1 MGP_NODShiLtJ_G0019370.1 mouse_genomes_project 11 132733244 132735493 + Anapc11 protein_coding retained_intron MGP_NODShiLtJ_T0033878.1 MGP_NODShiLtJ_G0019370.1 mouse_genomes_project 11 132733336 132740424 + MGP_NODShiLtJ_P0033878 Anapc11 protein_coding protein_coding MGP_NODShiLtJ_T0033879.1 MGP_NODShiLtJ_G0019370.1 mouse_genomes_project 11 132738591 132740140 + Anapc11 protein_coding processed_transcript MGP_NODShiLtJ_T0029553.1 MGP_NODShiLtJ_G0018342.1 mouse_genomes_project 11 73937054 73945071 + MGP_NODShiLtJ_P0029553 Rcvrn protein_coding protein_coding MGP_NODShiLtJ_T0031308.1 MGP_NODShiLtJ_G0018761.1 mouse_genomes_project 11 96050589 96061951 + MGP_NODShiLtJ_P0031308 Mpo protein_coding protein_coding MGP_NODShiLtJ_T0031309.1 MGP_NODShiLtJ_G0018761.1 mouse_genomes_project 11 96050856 96053068 + MGP_NODShiLtJ_P0031309 Mpo protein_coding protein_coding MGP_NODShiLtJ_T0031310.1 MGP_NODShiLtJ_G0018761.1 mouse_genomes_project 11 96051270 96061951 + MGP_NODShiLtJ_P0031310 Mpo protein_coding protein_coding MGP_NODShiLtJ_T0031311.1 MGP_NODShiLtJ_G0018761.1 mouse_genomes_project 11 96052219 96057464 + MGP_NODShiLtJ_P0031311 Mpo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031312.1 MGP_NODShiLtJ_G0018761.1 mouse_genomes_project 11 96060079 96061363 + MGP_NODShiLtJ_P0031312 Mpo protein_coding protein_coding MGP_NODShiLtJ_T0031313.1 MGP_NODShiLtJ_G0018761.1 mouse_genomes_project 11 96060654 96061911 + Mpo protein_coding retained_intron MGP_NODShiLtJ_T0029158.1 MGP_NODShiLtJ_G0018259.1 mouse_genomes_project 11 65369474 65408874 + Nt5m protein_coding processed_transcript MGP_NODShiLtJ_T0029159.1 MGP_NODShiLtJ_G0018259.1 mouse_genomes_project 11 65369474 65413281 + Nt5m protein_coding processed_transcript MGP_NODShiLtJ_T0029160.1 MGP_NODShiLtJ_G0018259.1 mouse_genomes_project 11 65378096 65408874 + MGP_NODShiLtJ_P0029160 Nt5m protein_coding protein_coding MGP_NODShiLtJ_T0029161.1 MGP_NODShiLtJ_G0018259.1 mouse_genomes_project 11 65378127 65408874 + Nt5m protein_coding processed_transcript MGP_NODShiLtJ_T0033907.1 MGP_NODShiLtJ_G0019374.1 mouse_genomes_project 11 132762541 132774528 - MGP_NODShiLtJ_P0033907 Mafg protein_coding protein_coding MGP_NODShiLtJ_T0033908.1 MGP_NODShiLtJ_G0019374.1 mouse_genomes_project 11 132766425 132768216 - MGP_NODShiLtJ_P0033908 Mafg protein_coding protein_coding MGP_NODShiLtJ_T0033909.1 MGP_NODShiLtJ_G0019374.1 mouse_genomes_project 11 132766559 132768055 - MGP_NODShiLtJ_P0033909 Mafg protein_coding protein_coding MGP_NODShiLtJ_T0033910.1 MGP_NODShiLtJ_G0019374.1 mouse_genomes_project 11 132766650 132767567 - MGP_NODShiLtJ_P0033910 Mafg protein_coding protein_coding MGP_NODShiLtJ_T0033911.1 MGP_NODShiLtJ_G0019374.1 mouse_genomes_project 11 132768642 132774484 - Mafg protein_coding processed_transcript MGP_NODShiLtJ_T0031613.1 MGP_NODShiLtJ_G0018840.1 mouse_genomes_project 11 105292105 105305548 - MGP_NODShiLtJ_P0031613 Abi3 protein_coding protein_coding MGP_NODShiLtJ_T0031615.1 MGP_NODShiLtJ_G0018840.1 mouse_genomes_project 11 105295066 105305615 - Abi3 protein_coding processed_transcript MGP_NODShiLtJ_T0031616.1 MGP_NODShiLtJ_G0018840.1 mouse_genomes_project 11 105295846 105299013 - MGP_NODShiLtJ_P0031616 Abi3 protein_coding protein_coding MGP_NODShiLtJ_T0031617.1 MGP_NODShiLtJ_G0018840.1 mouse_genomes_project 11 105300199 105305237 - Abi3 protein_coding processed_transcript MGP_NODShiLtJ_T0027569.1 MGP_NODShiLtJ_G0017836.1 mouse_genomes_project 11 1145305 1149490 + MGP_NODShiLtJ_P0027569 Gatsl3 protein_coding protein_coding MGP_NODShiLtJ_T0003251.1 MGP_NODShiLtJ_G0002998.1 mouse_genomes_project 11 112244527 112249361 - E130111B04Rik antisense antisense MGP_NODShiLtJ_T0003222.1 MGP_NODShiLtJ_G0002975.1 mouse_genomes_project 11 105889094 105896213 - Gm11536 antisense antisense MGP_NODShiLtJ_T0012523.1 MGP_NODShiLtJ_G0010631.1 mouse_genomes_project 11 69736787 69738069 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031664.1 MGP_NODShiLtJ_G0018858.1 mouse_genomes_project 11 105904623 105907766 + Hoxb2 protein_coding retained_intron MGP_NODShiLtJ_T0031665.1 MGP_NODShiLtJ_G0018858.1 mouse_genomes_project 11 105905729 105908120 + MGP_NODShiLtJ_P0031665 Hoxb2 protein_coding protein_coding MGP_NODShiLtJ_T0099971.1 MGP_NODShiLtJ_G0038365.1 mouse_genomes_project 11 133213301 133213426 + Gm22152 snoRNA snoRNA MGP_NODShiLtJ_T0012488.1 MGP_NODShiLtJ_G0010596.1 mouse_genomes_project 11 59111911 59113042 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029029.1 MGP_NODShiLtJ_G0018205.1 mouse_genomes_project 11 63778673 63783595 + MGP_NODShiLtJ_P0029029 1810065E05Rik protein_coding protein_coding MGP_NODShiLtJ_T0028470.1 MGP_NODShiLtJ_G0018053.1 mouse_genomes_project 11 50600878 50625028 - MGP_NODShiLtJ_P0028470 Dppa1 protein_coding protein_coding MGP_NODShiLtJ_T0028471.1 MGP_NODShiLtJ_G0018053.1 mouse_genomes_project 11 50601816 50625028 - MGP_NODShiLtJ_P0028471 Dppa1 protein_coding protein_coding MGP_NODShiLtJ_T0012625.1 MGP_NODShiLtJ_G0010733.1 mouse_genomes_project 11 112330650 112330975 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012394.1 MGP_NODShiLtJ_G0010502.1 mouse_genomes_project 11 20780060 20780354 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012494.1 MGP_NODShiLtJ_G0010602.1 mouse_genomes_project 11 60530549 60530719 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033591.1 MGP_NODShiLtJ_G0019310.1 mouse_genomes_project 11 129732312 129736095 + MGP_NODShiLtJ_P0033591 Syngr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033592.1 MGP_NODShiLtJ_G0019310.1 mouse_genomes_project 11 129732315 129736903 + MGP_NODShiLtJ_P0033592 Syngr2 protein_coding protein_coding MGP_NODShiLtJ_T0033593.1 MGP_NODShiLtJ_G0019310.1 mouse_genomes_project 11 129732324 129736095 + MGP_NODShiLtJ_P0033593 Syngr2 protein_coding protein_coding MGP_NODShiLtJ_T0033594.1 MGP_NODShiLtJ_G0019310.1 mouse_genomes_project 11 129734877 129735738 + MGP_NODShiLtJ_P0033594 Syngr2 protein_coding protein_coding MGP_NODShiLtJ_T0033595.1 MGP_NODShiLtJ_G0019310.1 mouse_genomes_project 11 129735610 129736032 + Syngr2 protein_coding retained_intron MGP_NODShiLtJ_T0012629.1 MGP_NODShiLtJ_G0010737.1 mouse_genomes_project 11 113002279 113003042 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011182.1 MGP_NODShiLtJ_G0009315.1 mouse_genomes_project 11 528478 528714 - Gm27517 misc_RNA misc_RNA MGP_NODShiLtJ_T0012552.1 MGP_NODShiLtJ_G0010660.1 mouse_genomes_project 11 83754969 83755472 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032856.1 MGP_NODShiLtJ_G0019162.1 mouse_genomes_project 11 117142246 117258653 - MGP_NODShiLtJ_P0032856 Tex2 protein_coding protein_coding MGP_NODShiLtJ_T0032857.1 MGP_NODShiLtJ_G0019162.1 mouse_genomes_project 11 117187973 117223506 - MGP_NODShiLtJ_P0032857 Tex2 protein_coding protein_coding MGP_NODShiLtJ_T0032858.1 MGP_NODShiLtJ_G0019162.1 mouse_genomes_project 11 117212662 117259146 - MGP_NODShiLtJ_P0032858 Tex2 protein_coding protein_coding MGP_NODShiLtJ_T0032859.1 MGP_NODShiLtJ_G0019162.1 mouse_genomes_project 11 117213047 117224993 - MGP_NODShiLtJ_P0032859 Tex2 protein_coding protein_coding MGP_NODShiLtJ_T0028090.1 MGP_NODShiLtJ_G0017955.1 mouse_genomes_project 11 26960724 27098938 - MGP_NODShiLtJ_P0028090 Vrk2 protein_coding protein_coding MGP_NODShiLtJ_T0028091.1 MGP_NODShiLtJ_G0017955.1 mouse_genomes_project 11 26960806 27102038 - MGP_NODShiLtJ_P0028091 Vrk2 protein_coding protein_coding MGP_NODShiLtJ_T0028092.1 MGP_NODShiLtJ_G0017955.1 mouse_genomes_project 11 27036967 27101757 - Vrk2 protein_coding retained_intron MGP_NODShiLtJ_T0028093.1 MGP_NODShiLtJ_G0017955.1 mouse_genomes_project 11 27037383 27052623 - Vrk2 protein_coding processed_transcript MGP_NODShiLtJ_T0028094.1 MGP_NODShiLtJ_G0017955.1 mouse_genomes_project 11 27048480 27102041 - Vrk2 protein_coding retained_intron MGP_NODShiLtJ_T0028095.1 MGP_NODShiLtJ_G0017955.1 mouse_genomes_project 11 27050933 27102117 - MGP_NODShiLtJ_P0028095 Vrk2 protein_coding protein_coding MGP_NODShiLtJ_T0028096.1 MGP_NODShiLtJ_G0017955.1 mouse_genomes_project 11 27090546 27101738 - Vrk2 protein_coding processed_transcript MGP_NODShiLtJ_T0003243.1 MGP_NODShiLtJ_G0002990.1 mouse_genomes_project 11 110705252 110715475 + Dhx58os antisense antisense MGP_NODShiLtJ_T0030159.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575577 77583199 + MGP_NODShiLtJ_P0030159 Rpain protein_coding protein_coding MGP_NODShiLtJ_T0030160.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575591 77577284 + MGP_NODShiLtJ_P0030160 Rpain protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030161.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575844 77579528 + Rpain protein_coding retained_intron MGP_NODShiLtJ_T0030162.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575850 77577714 + Rpain protein_coding retained_intron MGP_NODShiLtJ_T0030163.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575855 77578856 + Rpain protein_coding retained_intron MGP_NODShiLtJ_T0030164.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575871 77583053 + MGP_NODShiLtJ_P0030164 Rpain protein_coding protein_coding MGP_NODShiLtJ_T0030165.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575871 77583053 + MGP_NODShiLtJ_P0030165 Rpain protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030166.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575871 77583053 + MGP_NODShiLtJ_P0030166 Rpain protein_coding protein_coding MGP_NODShiLtJ_T0030167.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575871 77583053 + MGP_NODShiLtJ_P0030167 Rpain protein_coding protein_coding MGP_NODShiLtJ_T0030168.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575871 77583053 + MGP_NODShiLtJ_P0030168 Rpain protein_coding protein_coding MGP_NODShiLtJ_T0030169.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77575893 77579795 + Rpain protein_coding retained_intron MGP_NODShiLtJ_T0030170.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77578167 77583171 + Rpain protein_coding retained_intron MGP_NODShiLtJ_T0030171.1 MGP_NODShiLtJ_G0018467.1 mouse_genomes_project 11 77580105 77583167 + Rpain protein_coding retained_intron MGP_NODShiLtJ_T0033553.1 MGP_NODShiLtJ_G0019302.1 mouse_genomes_project 11 128973799 129012826 + Sec14l1 protein_coding retained_intron MGP_NODShiLtJ_T0033554.1 MGP_NODShiLtJ_G0019302.1 mouse_genomes_project 11 128973803 129021521 + MGP_NODShiLtJ_P0033554 Sec14l1 protein_coding protein_coding MGP_NODShiLtJ_T0033555.1 MGP_NODShiLtJ_G0019302.1 mouse_genomes_project 11 128973869 129019815 + MGP_NODShiLtJ_P0033555 Sec14l1 protein_coding protein_coding MGP_NODShiLtJ_T0033556.1 MGP_NODShiLtJ_G0019302.1 mouse_genomes_project 11 128973869 129021524 + MGP_NODShiLtJ_P0033556 Sec14l1 protein_coding protein_coding MGP_NODShiLtJ_T0033557.1 MGP_NODShiLtJ_G0019302.1 mouse_genomes_project 11 128973883 128987390 + Sec14l1 protein_coding processed_transcript MGP_NODShiLtJ_T0033558.1 MGP_NODShiLtJ_G0019302.1 mouse_genomes_project 11 129017327 129018736 + Sec14l1 protein_coding retained_intron MGP_NODShiLtJ_T0006127.1 MGP_NODShiLtJ_G0005114.1 mouse_genomes_project 11 23172088 23186381 + 1700061J23Rik lincRNA lincRNA MGP_NODShiLtJ_T0012400.1 MGP_NODShiLtJ_G0010508.1 mouse_genomes_project 11 21220188 21220761 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028785.1 MGP_NODShiLtJ_G0018140.1 mouse_genomes_project 11 58170764 58179370 + MGP_NODShiLtJ_P0028785 Zcchc10 protein_coding protein_coding MGP_NODShiLtJ_T0028786.1 MGP_NODShiLtJ_G0018140.1 mouse_genomes_project 11 58173485 58178548 + MGP_NODShiLtJ_P0028786 Zcchc10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030144.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77544104 77571641 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030145.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77544118 77571655 - MGP_NODShiLtJ_P0030145 Nup88 protein_coding protein_coding MGP_NODShiLtJ_T0030146.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77544123 77547361 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030147.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77544128 77571644 - MGP_NODShiLtJ_P0030147 Nup88 protein_coding protein_coding MGP_NODShiLtJ_T0030148.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77544148 77571636 - MGP_NODShiLtJ_P0030148 Nup88 protein_coding protein_coding MGP_NODShiLtJ_T0030149.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77544222 77571562 - MGP_NODShiLtJ_P0030149 Nup88 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030150.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77544923 77546145 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030151.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77544982 77545533 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030152.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77545024 77545782 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030153.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77545457 77546079 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030154.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77545727 77549813 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030155.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77550562 77571643 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030156.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77555473 77557475 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030157.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77556171 77557926 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0030158.1 MGP_NODShiLtJ_G0018466.1 mouse_genomes_project 11 77557212 77562775 - Nup88 protein_coding retained_intron MGP_NODShiLtJ_T0032388.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111952647 111970994 - MGP_NODShiLtJ_P0032388 Etv4 protein_coding protein_coding MGP_NODShiLtJ_T0032389.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111952652 111971055 - MGP_NODShiLtJ_P0032389 Etv4 protein_coding protein_coding MGP_NODShiLtJ_T0032390.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111952652 111971055 - MGP_NODShiLtJ_P0032390 Etv4 protein_coding protein_coding MGP_NODShiLtJ_T0032391.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111953252 111955077 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032392.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111956587 111970545 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032393.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111956726 111970942 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032394.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111956757 111970175 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032395.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111956976 111970906 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032396.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111957063 111970944 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032397.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111957063 111968713 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032398.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111957103 111970994 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032399.1 MGP_NODShiLtJ_G0019065.1 mouse_genomes_project 11 111968579 111970532 - Etv4 protein_coding processed_transcript MGP_NODShiLtJ_T0032480.1 MGP_NODShiLtJ_G0019081.1 mouse_genomes_project 11 112492953 112503277 + MGP_NODShiLtJ_P0032480 Asb16 protein_coding protein_coding MGP_NODShiLtJ_T0003147.1 MGP_NODShiLtJ_G0002916.1 mouse_genomes_project 11 68570197 68573578 - antisense antisense MGP_NODShiLtJ_T0006255.1 MGP_NODShiLtJ_G0005214.1 mouse_genomes_project 11 104626429 104628772 - Gm11515 lincRNA lincRNA MGP_NODShiLtJ_T0012459.1 MGP_NODShiLtJ_G0010567.1 mouse_genomes_project 11 49722709 49723098 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009585.1 MGP_NODShiLtJ_G0007718.1 mouse_genomes_project 11 54883342 54883437 - Mir804 miRNA miRNA MGP_NODShiLtJ_T0098689.1 MGP_NODShiLtJ_G0037083.1 mouse_genomes_project 11 71697242 71697352 + Gm26128 snRNA snRNA MGP_NODShiLtJ_T0029011.1 MGP_NODShiLtJ_G0018201.1 mouse_genomes_project 11 63643959 63651530 + MGP_NODShiLtJ_P0029011 Zfp692 protein_coding protein_coding MGP_NODShiLtJ_T0029012.1 MGP_NODShiLtJ_G0018201.1 mouse_genomes_project 11 63644062 63651544 + MGP_NODShiLtJ_P0029012 Zfp692 protein_coding protein_coding MGP_NODShiLtJ_T0003257.1 MGP_NODShiLtJ_G0003004.1 mouse_genomes_project 11 113674893 113676332 + Arhgap27os1 antisense antisense MGP_NODShiLtJ_T0033963.1 MGP_NODShiLtJ_G0019383.1 mouse_genomes_project 11 132876059 132879765 - MGP_NODShiLtJ_P0033963 Cbr2 protein_coding protein_coding MGP_NODShiLtJ_T0033964.1 MGP_NODShiLtJ_G0019383.1 mouse_genomes_project 11 132876074 132876687 - Cbr2 protein_coding retained_intron MGP_NODShiLtJ_T0033965.1 MGP_NODShiLtJ_G0019383.1 mouse_genomes_project 11 132876349 132879595 - MGP_NODShiLtJ_P0033965 Cbr2 protein_coding protein_coding MGP_NODShiLtJ_T0033966.1 MGP_NODShiLtJ_G0019383.1 mouse_genomes_project 11 132876694 132879603 - Cbr2 protein_coding retained_intron MGP_NODShiLtJ_T0097893.1 MGP_NODShiLtJ_G0036305.1 mouse_genomes_project 11 65342641 65342778 + Gm24939 rRNA rRNA MGP_NODShiLtJ_T0031631.1 MGP_NODShiLtJ_G0018844.1 mouse_genomes_project 11 105519134 105525263 + MGP_NODShiLtJ_P0031631 Gip protein_coding protein_coding MGP_NODShiLtJ_T0031632.1 MGP_NODShiLtJ_G0018844.1 mouse_genomes_project 11 105519635 105525263 + MGP_NODShiLtJ_P0031632 Gip protein_coding protein_coding MGP_NODShiLtJ_T0032046.1 MGP_NODShiLtJ_G0018966.1 mouse_genomes_project 11 109624025 109624103 - MGP_NODShiLtJ_P0032046 Gm14180 protein_coding protein_coding MGP_NODShiLtJ_T0029683.1 MGP_NODShiLtJ_G0018368.1 mouse_genomes_project 11 75474327 75476863 - MGP_NODShiLtJ_P0029683 9130213A22Rik protein_coding protein_coding MGP_NODShiLtJ_T0029834.1 MGP_NODShiLtJ_G0018407.1 mouse_genomes_project 11 76275705 76287466 - MGP_NODShiLtJ_P0029834 Nlgn2 protein_coding protein_coding MGP_NODShiLtJ_T0029835.1 MGP_NODShiLtJ_G0018407.1 mouse_genomes_project 11 76275705 76290420 - MGP_NODShiLtJ_P0029835 Nlgn2 protein_coding protein_coding MGP_NODShiLtJ_T0029836.1 MGP_NODShiLtJ_G0018407.1 mouse_genomes_project 11 76280319 76286876 - MGP_NODShiLtJ_P0029836 Nlgn2 protein_coding protein_coding MGP_NODShiLtJ_T0029837.1 MGP_NODShiLtJ_G0018407.1 mouse_genomes_project 11 76280624 76281140 - Nlgn2 protein_coding retained_intron MGP_NODShiLtJ_T0028077.1 MGP_NODShiLtJ_G0017953.1 mouse_genomes_project 11 25991844 26039238 - 5730522E02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0028078.1 MGP_NODShiLtJ_G0017953.1 mouse_genomes_project 11 25991896 26007746 - 5730522E02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0028079.1 MGP_NODShiLtJ_G0017953.1 mouse_genomes_project 11 26005332 26684172 - 5730522E02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0028080.1 MGP_NODShiLtJ_G0017953.1 mouse_genomes_project 11 26006734 26684175 - MGP_NODShiLtJ_P0028080 5730522E02Rik protein_coding protein_coding MGP_NODShiLtJ_T0028081.1 MGP_NODShiLtJ_G0017953.1 mouse_genomes_project 11 26025845 26044699 - 5730522E02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0028082.1 MGP_NODShiLtJ_G0017953.1 mouse_genomes_project 11 26039005 26175904 - MGP_NODShiLtJ_P0028082 5730522E02Rik protein_coding protein_coding MGP_NODShiLtJ_T0028083.1 MGP_NODShiLtJ_G0017953.1 mouse_genomes_project 11 26253619 26540750 - 5730522E02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0028084.1 MGP_NODShiLtJ_G0017953.1 mouse_genomes_project 11 26565650 26684366 - 5730522E02Rik protein_coding processed_transcript MGP_NODShiLtJ_T0009577.1 MGP_NODShiLtJ_G0007710.1 mouse_genomes_project 11 47077454 47077519 - Mir146 miRNA miRNA MGP_NODShiLtJ_T0012604.1 MGP_NODShiLtJ_G0010712.1 mouse_genomes_project 11 105793810 105794280 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012337.1 MGP_NODShiLtJ_G0010445.1 mouse_genomes_project 11 510687 511525 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031554.1 MGP_NODShiLtJ_G0018824.1 mouse_genomes_project 11 104403228 104423089 + MGP_NODShiLtJ_P0031554 Samd14 protein_coding protein_coding MGP_NODShiLtJ_T0031555.1 MGP_NODShiLtJ_G0018824.1 mouse_genomes_project 11 104403231 104417500 + Samd14 protein_coding processed_transcript MGP_NODShiLtJ_T0031556.1 MGP_NODShiLtJ_G0018824.1 mouse_genomes_project 11 104404669 104415976 + MGP_NODShiLtJ_P0031556 Samd14 protein_coding protein_coding MGP_NODShiLtJ_T0012542.1 MGP_NODShiLtJ_G0010650.1 mouse_genomes_project 11 77686614 77688826 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017060.1 MGP_NODShiLtJ_G0015038.1 mouse_genomes_project 11 53030091 53040901 - Gm16170 processed_transcript processed_transcript MGP_NODShiLtJ_T0098698.1 MGP_NODShiLtJ_G0037092.1 mouse_genomes_project 11 82053039 82053130 - Gm22733 snRNA snRNA MGP_NODShiLtJ_T0028314.1 MGP_NODShiLtJ_G0018012.1 mouse_genomes_project 11 37659695 37661199 - MGP_NODShiLtJ_P0028314 Fbll1 protein_coding protein_coding MGP_NODShiLtJ_T0006173.1 MGP_NODShiLtJ_G0005154.1 mouse_genomes_project 11 55790475 55821589 - lincRNA lincRNA MGP_NODShiLtJ_T0006174.1 MGP_NODShiLtJ_G0005154.1 mouse_genomes_project 11 55790893 55820697 - lincRNA lincRNA MGP_NODShiLtJ_T0027694.1 MGP_NODShiLtJ_G0017863.1 mouse_genomes_project 11 2914824 2926732 + MGP_NODShiLtJ_P0027694 Dbnl protein_coding protein_coding MGP_NODShiLtJ_T0027695.1 MGP_NODShiLtJ_G0017863.1 mouse_genomes_project 11 2914858 2926390 + MGP_NODShiLtJ_P0027695 Dbnl protein_coding protein_coding MGP_NODShiLtJ_T0027696.1 MGP_NODShiLtJ_G0017863.1 mouse_genomes_project 11 2914866 2927065 + MGP_NODShiLtJ_P0027696 Dbnl protein_coding protein_coding MGP_NODShiLtJ_T0099923.1 MGP_NODShiLtJ_G0038317.1 mouse_genomes_project 11 52985351 52985419 + Snord95 snoRNA snoRNA MGP_NODShiLtJ_T0012368.1 MGP_NODShiLtJ_G0010476.1 mouse_genomes_project 11 13278792 13279341 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028733.1 MGP_NODShiLtJ_G0018127.1 mouse_genomes_project 11 56443241 56478813 + MGP_NODShiLtJ_P0028733 Sar1b protein_coding protein_coding MGP_NODShiLtJ_T0028734.1 MGP_NODShiLtJ_G0018127.1 mouse_genomes_project 11 56443248 56462367 + Sar1b protein_coding processed_transcript MGP_NODShiLtJ_T0098178.1 MGP_NODShiLtJ_G0036590.1 mouse_genomes_project 11 127916547 127916673 - Gm26413 scaRNA scaRNA MGP_NODShiLtJ_T0003100.1 MGP_NODShiLtJ_G0002875.1 mouse_genomes_project 11 50096146 50097272 - Gm16034 antisense antisense MGP_NODShiLtJ_T0033614.1 MGP_NODShiLtJ_G0019316.1 mouse_genomes_project 11 129906321 129909431 - MGP_NODShiLtJ_P0033614 Socs3 protein_coding protein_coding MGP_NODShiLtJ_T0033615.1 MGP_NODShiLtJ_G0019316.1 mouse_genomes_project 11 129909119 129910292 - Socs3 protein_coding processed_transcript MGP_NODShiLtJ_T0033616.1 MGP_NODShiLtJ_G0019316.1 mouse_genomes_project 11 129909178 129909696 - Socs3 protein_coding processed_transcript MGP_NODShiLtJ_T0012502.1 MGP_NODShiLtJ_G0010610.1 mouse_genomes_project 11 63749946 63750165 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009583.1 MGP_NODShiLtJ_G0007716.1 mouse_genomes_project 11 54575276 54575374 + Mir340 miRNA miRNA MGP_NODShiLtJ_T0028976.1 MGP_NODShiLtJ_G0018189.1 mouse_genomes_project 11 62711130 62749838 - MGP_NODShiLtJ_P0028976 Fam114a2 protein_coding protein_coding MGP_NODShiLtJ_T0028977.1 MGP_NODShiLtJ_G0018189.1 mouse_genomes_project 11 62711355 62749805 - MGP_NODShiLtJ_P0028977 Fam114a2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028978.1 MGP_NODShiLtJ_G0018189.1 mouse_genomes_project 11 62736597 62738654 - Fam114a2 protein_coding processed_transcript MGP_NODShiLtJ_T0028979.1 MGP_NODShiLtJ_G0018189.1 mouse_genomes_project 11 62738600 62749837 - Fam114a2 protein_coding processed_transcript MGP_NODShiLtJ_T0003125.1 MGP_NODShiLtJ_G0002898.1 mouse_genomes_project 11 63442562 63444996 + Gm12246 antisense antisense MGP_NODShiLtJ_T0030837.1 MGP_NODShiLtJ_G0018640.1 mouse_genomes_project 11 86416138 86460683 + MGP_NODShiLtJ_P0030837 Nos2 protein_coding protein_coding MGP_NODShiLtJ_T0030838.1 MGP_NODShiLtJ_G0018640.1 mouse_genomes_project 11 86420551 86460181 + MGP_NODShiLtJ_P0030838 Nos2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031811.1 MGP_NODShiLtJ_G0018891.1 mouse_genomes_project 11 107437757 107444324 - MGP_NODShiLtJ_P0031811 Rpl23 protein_coding protein_coding MGP_NODShiLtJ_T0031812.1 MGP_NODShiLtJ_G0018891.1 mouse_genomes_project 11 107438268 107444163 - Rpl23 protein_coding processed_transcript MGP_NODShiLtJ_T0031813.1 MGP_NODShiLtJ_G0018891.1 mouse_genomes_project 11 107438286 107439042 - Rpl23 protein_coding processed_transcript MGP_NODShiLtJ_T0031814.1 MGP_NODShiLtJ_G0018891.1 mouse_genomes_project 11 107443248 107444249 - Rpl23 protein_coding processed_transcript MGP_NODShiLtJ_T0031815.1 MGP_NODShiLtJ_G0018891.1 mouse_genomes_project 11 107443290 107444269 - MGP_NODShiLtJ_P0031815 Rpl23 protein_coding protein_coding MGP_NODShiLtJ_T0032321.1 MGP_NODShiLtJ_G0019051.1 mouse_genomes_project 11 111530954 111550067 - MGP_NODShiLtJ_P0032321 Gm27029 protein_coding protein_coding MGP_NODShiLtJ_T0032323.1 MGP_NODShiLtJ_G0019051.1 mouse_genomes_project 11 111531129 111550344 - MGP_NODShiLtJ_P0032323 Gm27029 protein_coding protein_coding MGP_NODShiLtJ_T0017044.1 MGP_NODShiLtJ_G0015027.1 mouse_genomes_project 11 22827449 22830564 + Gm20456 processed_transcript processed_transcript MGP_NODShiLtJ_T0033235.1 MGP_NODShiLtJ_G0019248.1 mouse_genomes_project 11 127198570 127216128 - MGP_NODShiLtJ_P0033235 Hn1 protein_coding protein_coding MGP_NODShiLtJ_T0033236.1 MGP_NODShiLtJ_G0019248.1 mouse_genomes_project 11 127198996 127215889 - Hn1 protein_coding processed_transcript MGP_NODShiLtJ_T0033237.1 MGP_NODShiLtJ_G0019248.1 mouse_genomes_project 11 127199095 127216089 - Hn1 protein_coding processed_transcript MGP_NODShiLtJ_T0033238.1 MGP_NODShiLtJ_G0019248.1 mouse_genomes_project 11 127201347 127216112 - Hn1 protein_coding processed_transcript MGP_NODShiLtJ_T0033239.1 MGP_NODShiLtJ_G0019248.1 mouse_genomes_project 11 127205186 127215857 - Hn1 protein_coding processed_transcript MGP_NODShiLtJ_T0030442.1 MGP_NODShiLtJ_G0018554.1 mouse_genomes_project 11 82307559 82325953 - MGP_NODShiLtJ_P0030442 Dph1 protein_coding protein_coding MGP_NODShiLtJ_T0030443.1 MGP_NODShiLtJ_G0018554.1 mouse_genomes_project 11 82307612 82313223 - Dph1 protein_coding retained_intron MGP_NODShiLtJ_T0030445.1 MGP_NODShiLtJ_G0018554.1 mouse_genomes_project 11 82308212 82311224 - Dph1 protein_coding processed_transcript MGP_NODShiLtJ_T0030446.1 MGP_NODShiLtJ_G0018554.1 mouse_genomes_project 11 82309105 82313415 - Dph1 protein_coding processed_transcript MGP_NODShiLtJ_T0030447.1 MGP_NODShiLtJ_G0018554.1 mouse_genomes_project 11 82310736 82326675 - MGP_NODShiLtJ_P0030447 Dph1 protein_coding protein_coding MGP_NODShiLtJ_T0032252.1 MGP_NODShiLtJ_G0019037.1 mouse_genomes_project 11 111229197 111237496 - MGP_NODShiLtJ_P0032252 Plekhh3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032253.1 MGP_NODShiLtJ_G0019037.1 mouse_genomes_project 11 111229197 111237892 - MGP_NODShiLtJ_P0032253 Plekhh3 protein_coding protein_coding MGP_NODShiLtJ_T0032254.1 MGP_NODShiLtJ_G0019037.1 mouse_genomes_project 11 111229197 111232139 - MGP_NODShiLtJ_P0032254 Plekhh3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032255.1 MGP_NODShiLtJ_G0019037.1 mouse_genomes_project 11 111229200 111237858 - MGP_NODShiLtJ_P0032255 Plekhh3 protein_coding protein_coding MGP_NODShiLtJ_T0032256.1 MGP_NODShiLtJ_G0019037.1 mouse_genomes_project 11 111230685 111231843 - Plekhh3 protein_coding processed_transcript MGP_NODShiLtJ_T0032257.1 MGP_NODShiLtJ_G0019037.1 mouse_genomes_project 11 111234012 111236895 - MGP_NODShiLtJ_P0032257 Plekhh3 protein_coding protein_coding MGP_NODShiLtJ_T0099963.1 MGP_NODShiLtJ_G0038357.1 mouse_genomes_project 11 117141092 117141162 + Snord104 snoRNA snoRNA MGP_NODShiLtJ_T0031768.1 MGP_NODShiLtJ_G0018878.1 mouse_genomes_project 11 106942238 106955724 + MGP_NODShiLtJ_P0031768 Mrpl45 protein_coding protein_coding MGP_NODShiLtJ_T0031769.1 MGP_NODShiLtJ_G0018878.1 mouse_genomes_project 11 106942424 106947916 + MGP_NODShiLtJ_P0031769 Mrpl45 protein_coding protein_coding MGP_NODShiLtJ_T0027692.1 MGP_NODShiLtJ_G0017862.1 mouse_genomes_project 11 2823324 2859749 - MGP_NODShiLtJ_P0027692 Urgcp protein_coding protein_coding MGP_NODShiLtJ_T0027693.1 MGP_NODShiLtJ_G0017862.1 mouse_genomes_project 11 2830678 2859785 - MGP_NODShiLtJ_P0027693 Urgcp protein_coding protein_coding MGP_NODShiLtJ_T0029761.1 MGP_NODShiLtJ_G0018389.1 mouse_genomes_project 11 76025842 76027689 + MGP_NODShiLtJ_P0029761 Sat2 protein_coding protein_coding MGP_NODShiLtJ_T0029762.1 MGP_NODShiLtJ_G0018389.1 mouse_genomes_project 11 76025870 76027277 + Sat2 protein_coding retained_intron MGP_NODShiLtJ_T0029763.1 MGP_NODShiLtJ_G0018389.1 mouse_genomes_project 11 76025870 76027689 + MGP_NODShiLtJ_P0029763 Sat2 protein_coding protein_coding MGP_NODShiLtJ_T0032740.1 MGP_NODShiLtJ_G0019132.1 mouse_genomes_project 11 115103459 115190987 + MGP_NODShiLtJ_P0032740 protein_coding protein_coding MGP_NODShiLtJ_T0032741.1 MGP_NODShiLtJ_G0019132.1 mouse_genomes_project 11 115125216 115148207 + protein_coding processed_transcript MGP_NODShiLtJ_T0028046.1 MGP_NODShiLtJ_G0017945.1 mouse_genomes_project 11 23649801 23653451 - MGP_NODShiLtJ_P0028046 1700093K21Rik protein_coding protein_coding MGP_NODShiLtJ_T0028047.1 MGP_NODShiLtJ_G0017945.1 mouse_genomes_project 11 23649801 23652731 - MGP_NODShiLtJ_P0028047 1700093K21Rik protein_coding protein_coding MGP_NODShiLtJ_T0028048.1 MGP_NODShiLtJ_G0017945.1 mouse_genomes_project 11 23652295 23653451 - MGP_NODShiLtJ_P0028048 1700093K21Rik protein_coding protein_coding MGP_NODShiLtJ_T0028049.1 MGP_NODShiLtJ_G0017945.1 mouse_genomes_project 11 23652324 23654663 - MGP_NODShiLtJ_P0028049 1700093K21Rik protein_coding protein_coding MGP_NODShiLtJ_T0029551.1 MGP_NODShiLtJ_G0018341.1 mouse_genomes_project 11 73901833 74005235 - MGP_NODShiLtJ_P0029551 Glp2r protein_coding protein_coding MGP_NODShiLtJ_T0029554.1 MGP_NODShiLtJ_G0018341.1 mouse_genomes_project 11 73948169 74018594 - MGP_NODShiLtJ_P0029554 Glp2r protein_coding protein_coding MGP_NODShiLtJ_T0028118.1 MGP_NODShiLtJ_G0017961.1 mouse_genomes_project 11 30548692 30575040 - MGP_NODShiLtJ_P0028118 Cfap36 protein_coding protein_coding MGP_NODShiLtJ_T0028119.1 MGP_NODShiLtJ_G0017961.1 mouse_genomes_project 11 30553220 30574916 - Cfap36 protein_coding retained_intron MGP_NODShiLtJ_T0028120.1 MGP_NODShiLtJ_G0017961.1 mouse_genomes_project 11 30558045 30574550 - MGP_NODShiLtJ_P0028120 Cfap36 protein_coding protein_coding MGP_NODShiLtJ_T0028121.1 MGP_NODShiLtJ_G0017961.1 mouse_genomes_project 11 30571447 30574696 - Cfap36 protein_coding retained_intron MGP_NODShiLtJ_T0028122.1 MGP_NODShiLtJ_G0017961.1 mouse_genomes_project 11 30572349 30574820 - Cfap36 protein_coding retained_intron MGP_NODShiLtJ_T0027462.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 186063 216044 - Limk2 protein_coding processed_transcript MGP_NODShiLtJ_T0027463.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 186063 256911 - MGP_NODShiLtJ_P0027463 Limk2 protein_coding protein_coding MGP_NODShiLtJ_T0027464.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 186063 216044 - MGP_NODShiLtJ_P0027464 Limk2 protein_coding protein_coding MGP_NODShiLtJ_T0027465.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 187547 216225 - MGP_NODShiLtJ_P0027465 Limk2 protein_coding protein_coding MGP_NODShiLtJ_T0027466.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 191831 195438 - Limk2 protein_coding processed_transcript MGP_NODShiLtJ_T0027467.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 195390 198489 - Limk2 protein_coding processed_transcript MGP_NODShiLtJ_T0027468.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 196028 198824 - Limk2 protein_coding processed_transcript MGP_NODShiLtJ_T0027469.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 198488 256911 - Limk2 protein_coding processed_transcript MGP_NODShiLtJ_T0027470.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 202919 213830 - Limk2 protein_coding processed_transcript MGP_NODShiLtJ_T0027471.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 205202 216003 - Limk2 protein_coding processed_transcript MGP_NODShiLtJ_T0027472.1 MGP_NODShiLtJ_G0017813.1 mouse_genomes_project 11 242504 256926 - Limk2 protein_coding processed_transcript MGP_NODShiLtJ_T0030410.1 MGP_NODShiLtJ_G0018547.1 mouse_genomes_project 11 81946750 81961535 + MGP_NODShiLtJ_P0030410 Mnt protein_coding protein_coding MGP_NODShiLtJ_T0030411.1 MGP_NODShiLtJ_G0018547.1 mouse_genomes_project 11 81952146 81953544 + Mnt protein_coding retained_intron MGP_NODShiLtJ_T0030412.1 MGP_NODShiLtJ_G0018547.1 mouse_genomes_project 11 81953288 81959585 + MGP_NODShiLtJ_P0030412 Mnt protein_coding protein_coding MGP_NODShiLtJ_T0000831.1 MGP_NODShiLtJ_G0000761.1 mouse_genomes_project 11 116533912 116535458 + TEC TEC MGP_NODShiLtJ_T0031969.1 MGP_NODShiLtJ_G0018926.1 mouse_genomes_project 11 108639474 108671495 + MGP_NODShiLtJ_P0031969 Wipf2 protein_coding protein_coding MGP_NODShiLtJ_T0031970.1 MGP_NODShiLtJ_G0018926.1 mouse_genomes_project 11 108639474 108684223 + MGP_NODShiLtJ_P0031970 Wipf2 protein_coding protein_coding MGP_NODShiLtJ_T0031971.1 MGP_NODShiLtJ_G0018926.1 mouse_genomes_project 11 108639803 108672036 + Wipf2 protein_coding retained_intron MGP_NODShiLtJ_T0031972.1 MGP_NODShiLtJ_G0018926.1 mouse_genomes_project 11 108670368 108671293 + Wipf2 protein_coding retained_intron MGP_NODShiLtJ_T0033440.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128098369 128175706 - MGP_NODShiLtJ_P0033440 Rnf157 protein_coding protein_coding MGP_NODShiLtJ_T0033441.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128098369 128120957 - MGP_NODShiLtJ_P0033441 Rnf157 protein_coding protein_coding MGP_NODShiLtJ_T0033442.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128098369 128175706 - MGP_NODShiLtJ_P0033442 Rnf157 protein_coding protein_coding MGP_NODShiLtJ_T0033443.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128100362 128109294 - Rnf157 protein_coding processed_transcript MGP_NODShiLtJ_T0033444.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128100429 128109768 - MGP_NODShiLtJ_P0033444 Rnf157 protein_coding protein_coding MGP_NODShiLtJ_T0033445.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128114497 128121357 - Rnf157 protein_coding processed_transcript MGP_NODShiLtJ_T0033446.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128115809 128117311 - Rnf157 protein_coding processed_transcript MGP_NODShiLtJ_T0033447.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128119200 128121183 - Rnf157 protein_coding processed_transcript MGP_NODShiLtJ_T0033448.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128121127 128121865 - Rnf157 protein_coding processed_transcript MGP_NODShiLtJ_T0033449.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128121741 128153136 - Rnf157 protein_coding processed_transcript MGP_NODShiLtJ_T0033450.1 MGP_NODShiLtJ_G0019282.1 mouse_genomes_project 11 128163055 128175706 - Rnf157 protein_coding processed_transcript MGP_NODShiLtJ_T0031926.1 MGP_NODShiLtJ_G0018917.1 mouse_genomes_project 11 108418433 108435630 + MGP_NODShiLtJ_P0031926 Gsdma protein_coding protein_coding MGP_NODShiLtJ_T0099912.1 MGP_NODShiLtJ_G0038306.1 mouse_genomes_project 11 25570570 25570698 - Gm24255 snoRNA snoRNA MGP_NODShiLtJ_T0029829.1 MGP_NODShiLtJ_G0018403.1 mouse_genomes_project 11 76247989 76254518 - MGP_NODShiLtJ_P0029829 Fgf11 protein_coding protein_coding MGP_NODShiLtJ_T0029830.1 MGP_NODShiLtJ_G0018403.1 mouse_genomes_project 11 76247994 76254659 - MGP_NODShiLtJ_P0029830 Fgf11 protein_coding protein_coding MGP_NODShiLtJ_T0028219.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33904226 33916997 - MGP_NODShiLtJ_P0028219 Rhbdf1 protein_coding protein_coding MGP_NODShiLtJ_T0028220.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33904227 33911980 - Rhbdf1 protein_coding retained_intron MGP_NODShiLtJ_T0028221.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33904228 33916977 - MGP_NODShiLtJ_P0028221 Rhbdf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028222.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33904445 33905781 - MGP_NODShiLtJ_P0028222 Rhbdf1 protein_coding protein_coding MGP_NODShiLtJ_T0028223.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33904591 33905542 - Rhbdf1 protein_coding retained_intron MGP_NODShiLtJ_T0028224.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33905040 33905912 - Rhbdf1 protein_coding retained_intron MGP_NODShiLtJ_T0028225.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33908927 33916977 - MGP_NODShiLtJ_P0028225 Rhbdf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028226.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33909710 33916941 - MGP_NODShiLtJ_P0028226 Rhbdf1 protein_coding protein_coding MGP_NODShiLtJ_T0028227.1 MGP_NODShiLtJ_G0017984.1 mouse_genomes_project 11 33910644 33916956 - MGP_NODShiLtJ_P0028227 Rhbdf1 protein_coding protein_coding MGP_NODShiLtJ_T0031114.1 MGP_NODShiLtJ_G0018720.1 mouse_genomes_project 11 92798421 92806683 - MGP_NODShiLtJ_P0031114 Mrm1 protein_coding protein_coding MGP_NODShiLtJ_T0031115.1 MGP_NODShiLtJ_G0018720.1 mouse_genomes_project 11 92801910 92802558 - Mrm1 protein_coding retained_intron MGP_NODShiLtJ_T0031116.1 MGP_NODShiLtJ_G0018720.1 mouse_genomes_project 11 92802170 92805902 - Mrm1 protein_coding processed_transcript MGP_NODShiLtJ_T0031239.1 MGP_NODShiLtJ_G0018745.1 mouse_genomes_project 11 95108695 95168342 - MGP_NODShiLtJ_P0031239 Ypel2 protein_coding protein_coding MGP_NODShiLtJ_T0017130.1 MGP_NODShiLtJ_G0015078.1 mouse_genomes_project 11 110349882 110351076 - Gm20394 processed_transcript processed_transcript MGP_NODShiLtJ_T0009642.1 MGP_NODShiLtJ_G0007775.1 mouse_genomes_project 11 105448815 105448907 - Mir3063 miRNA miRNA MGP_NODShiLtJ_T0030010.1 MGP_NODShiLtJ_G0018438.1 mouse_genomes_project 11 76738619 76755166 - MGP_NODShiLtJ_P0030010 Alox12 protein_coding protein_coding MGP_NODShiLtJ_T0030011.1 MGP_NODShiLtJ_G0018438.1 mouse_genomes_project 11 76748777 76755154 - MGP_NODShiLtJ_P0030011 Alox12 protein_coding protein_coding MGP_NODShiLtJ_T0003150.1 MGP_NODShiLtJ_G0002919.1 mouse_genomes_project 11 68789215 68789870 - Cdrt4os2 antisense antisense MGP_NODShiLtJ_T0029764.1 MGP_NODShiLtJ_G0018390.1 mouse_genomes_project 11 76040004 76060239 + MGP_NODShiLtJ_P0029764 Fxr2 protein_coding protein_coding MGP_NODShiLtJ_T0029765.1 MGP_NODShiLtJ_G0018390.1 mouse_genomes_project 11 76047095 76048354 + Fxr2 protein_coding processed_transcript MGP_NODShiLtJ_T0029766.1 MGP_NODShiLtJ_G0018390.1 mouse_genomes_project 11 76050490 76056743 + Fxr2 protein_coding processed_transcript MGP_NODShiLtJ_T0029767.1 MGP_NODShiLtJ_G0018390.1 mouse_genomes_project 11 76056546 76058023 + Fxr2 protein_coding processed_transcript MGP_NODShiLtJ_T0029768.1 MGP_NODShiLtJ_G0018390.1 mouse_genomes_project 11 76058070 76058664 + Fxr2 protein_coding processed_transcript MGP_NODShiLtJ_T0029769.1 MGP_NODShiLtJ_G0018390.1 mouse_genomes_project 11 76059261 76059865 + Fxr2 protein_coding processed_transcript MGP_NODShiLtJ_T0006124.1 MGP_NODShiLtJ_G0005111.1 mouse_genomes_project 11 22572136 22573217 + Gm12052 lincRNA lincRNA MGP_NODShiLtJ_T0031380.1 MGP_NODShiLtJ_G0018784.1 mouse_genomes_project 11 97861758 98006430 - MGP_NODShiLtJ_P0031380 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031381.1 MGP_NODShiLtJ_G0018784.1 mouse_genomes_project 11 97893583 98117812 - MGP_NODShiLtJ_P0031381 protein_coding protein_coding MGP_NODShiLtJ_T0031382.1 MGP_NODShiLtJ_G0018784.1 mouse_genomes_project 11 97893682 98018365 - MGP_NODShiLtJ_P0031382 protein_coding protein_coding MGP_NODShiLtJ_T0030101.1 MGP_NODShiLtJ_G0018458.1 mouse_genomes_project 11 77216290 77219893 + MGP_NODShiLtJ_P0030101 Eno3 protein_coding protein_coding MGP_NODShiLtJ_T0030102.1 MGP_NODShiLtJ_G0018458.1 mouse_genomes_project 11 77216290 77221607 + MGP_NODShiLtJ_P0030102 Eno3 protein_coding protein_coding MGP_NODShiLtJ_T0030103.1 MGP_NODShiLtJ_G0018458.1 mouse_genomes_project 11 77216292 77221607 + MGP_NODShiLtJ_P0030103 Eno3 protein_coding protein_coding MGP_NODShiLtJ_T0030104.1 MGP_NODShiLtJ_G0018458.1 mouse_genomes_project 11 77216373 77217506 + MGP_NODShiLtJ_P0030104 Eno3 protein_coding protein_coding MGP_NODShiLtJ_T0030105.1 MGP_NODShiLtJ_G0018458.1 mouse_genomes_project 11 77216775 77217535 + MGP_NODShiLtJ_P0030105 Eno3 protein_coding protein_coding MGP_NODShiLtJ_T0030106.1 MGP_NODShiLtJ_G0018458.1 mouse_genomes_project 11 77216883 77221604 + MGP_NODShiLtJ_P0030106 Eno3 protein_coding protein_coding MGP_NODShiLtJ_T0030107.1 MGP_NODShiLtJ_G0018458.1 mouse_genomes_project 11 77217426 77219932 + Eno3 protein_coding retained_intron MGP_NODShiLtJ_T0030108.1 MGP_NODShiLtJ_G0018458.1 mouse_genomes_project 11 77219860 77221358 + MGP_NODShiLtJ_P0030108 Eno3 protein_coding protein_coding MGP_NODShiLtJ_T0032425.1 MGP_NODShiLtJ_G0019072.1 mouse_genomes_project 11 112271373 112302827 - MGP_NODShiLtJ_P0032425 Mpp2 protein_coding protein_coding MGP_NODShiLtJ_T0032426.1 MGP_NODShiLtJ_G0019072.1 mouse_genomes_project 11 112271882 112296812 - MGP_NODShiLtJ_P0032426 Mpp2 protein_coding protein_coding MGP_NODShiLtJ_T0032427.1 MGP_NODShiLtJ_G0019072.1 mouse_genomes_project 11 112276423 112296747 - Mpp2 protein_coding processed_transcript MGP_NODShiLtJ_T0032428.1 MGP_NODShiLtJ_G0019072.1 mouse_genomes_project 11 112279004 112300061 - Mpp2 protein_coding retained_intron MGP_NODShiLtJ_T0032429.1 MGP_NODShiLtJ_G0019072.1 mouse_genomes_project 11 112294974 112302779 - Mpp2 protein_coding processed_transcript MGP_NODShiLtJ_T0032430.1 MGP_NODShiLtJ_G0019072.1 mouse_genomes_project 11 112295028 112302767 - Mpp2 protein_coding processed_transcript MGP_NODShiLtJ_T0028007.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 22989174 23002447 + MGP_NODShiLtJ_P0028007 Cct4 protein_coding protein_coding MGP_NODShiLtJ_T0028008.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 22989281 22993045 + MGP_NODShiLtJ_P0028008 Cct4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028009.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 22989294 22998543 + Cct4 protein_coding retained_intron MGP_NODShiLtJ_T0028010.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 22989305 22995752 + MGP_NODShiLtJ_P0028010 Cct4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028011.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 22989305 23001818 + MGP_NODShiLtJ_P0028011 Cct4 protein_coding protein_coding MGP_NODShiLtJ_T0028012.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 22989307 22995805 + MGP_NODShiLtJ_P0028012 Cct4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028013.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 22994279 22995757 + Cct4 protein_coding retained_intron MGP_NODShiLtJ_T0028014.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 22999603 23000286 + Cct4 protein_coding processed_transcript MGP_NODShiLtJ_T0028015.1 MGP_NODShiLtJ_G0017940.1 mouse_genomes_project 11 23000600 23001522 + Cct4 protein_coding retained_intron MGP_NODShiLtJ_T0030470.1 MGP_NODShiLtJ_G0018560.1 mouse_genomes_project 11 82589157 82605168 - MGP_NODShiLtJ_P0030470 Wdr81 protein_coding protein_coding MGP_NODShiLtJ_T0030471.1 MGP_NODShiLtJ_G0018560.1 mouse_genomes_project 11 82589161 82601812 - MGP_NODShiLtJ_P0030471 Wdr81 protein_coding protein_coding MGP_NODShiLtJ_T0030472.1 MGP_NODShiLtJ_G0018560.1 mouse_genomes_project 11 82596378 82597992 - Wdr81 protein_coding processed_transcript MGP_NODShiLtJ_T0006312.1 MGP_NODShiLtJ_G0005257.1 mouse_genomes_project 11 131144134 131161059 - Gm11755 lincRNA lincRNA MGP_NODShiLtJ_T0012671.1 MGP_NODShiLtJ_G0010779.1 mouse_genomes_project 11 133363117 133363572 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031365.1 MGP_NODShiLtJ_G0018776.1 mouse_genomes_project 11 97350297 97382366 - MGP_NODShiLtJ_P0031365 Scpep1 protein_coding protein_coding MGP_NODShiLtJ_T0028681.1 MGP_NODShiLtJ_G0018114.1 mouse_genomes_project 11 55575699 55576623 + MGP_NODShiLtJ_P0028681 Olfr51 protein_coding protein_coding MGP_NODShiLtJ_T0029063.1 MGP_NODShiLtJ_G0018230.1 mouse_genomes_project 11 64315928 64332487 + MGP_NODShiLtJ_P0029063 2810021J22Rik protein_coding protein_coding MGP_NODShiLtJ_T0029064.1 MGP_NODShiLtJ_G0018230.1 mouse_genomes_project 11 64315979 64327205 + MGP_NODShiLtJ_P0029064 2810021J22Rik protein_coding protein_coding MGP_NODShiLtJ_T0028839.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58674786 58682094 + MGP_NODShiLtJ_P0028839 Irf1 protein_coding protein_coding MGP_NODShiLtJ_T0028840.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58674820 58679874 + MGP_NODShiLtJ_P0028840 Irf1 protein_coding protein_coding MGP_NODShiLtJ_T0028841.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58674823 58683145 + MGP_NODShiLtJ_P0028841 Irf1 protein_coding protein_coding MGP_NODShiLtJ_T0028842.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58674843 58681149 + Irf1 protein_coding processed_transcript MGP_NODShiLtJ_T0028843.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58674877 58678856 + MGP_NODShiLtJ_P0028843 Irf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028844.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58675248 58677709 + MGP_NODShiLtJ_P0028844 Irf1 protein_coding protein_coding MGP_NODShiLtJ_T0028845.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58675258 58678965 + MGP_NODShiLtJ_P0028845 Irf1 protein_coding protein_coding MGP_NODShiLtJ_T0028846.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58675266 58682094 + MGP_NODShiLtJ_P0028846 Irf1 protein_coding protein_coding MGP_NODShiLtJ_T0028847.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58675280 58678728 + MGP_NODShiLtJ_P0028847 Irf1 protein_coding protein_coding MGP_NODShiLtJ_T0028849.1 MGP_NODShiLtJ_G0018156.1 mouse_genomes_project 11 58677923 58678901 + Irf1 protein_coding retained_intron MGP_NODShiLtJ_T0032837.1 MGP_NODShiLtJ_G0019156.1 mouse_genomes_project 11 116922845 116924440 - MGP_NODShiLtJ_P0032837 Gh protein_coding protein_coding MGP_NODShiLtJ_T0101560.1 MGP_NODShiLtJ_G0039730.1 mouse_genomes_project 11 91585756 91586667 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009574.1 MGP_NODShiLtJ_G0007707.1 mouse_genomes_project 11 37461521 37461631 + Mir218-2 miRNA miRNA MGP_NODShiLtJ_T0012617.1 MGP_NODShiLtJ_G0010725.1 mouse_genomes_project 11 109653544 109653712 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032031.1 MGP_NODShiLtJ_G0018951.1 mouse_genomes_project 11 109449170 109450211 - MGP_NODShiLtJ_P0032031 Krtap1-5 protein_coding protein_coding MGP_NODShiLtJ_T0098260.1 MGP_NODShiLtJ_G0036670.1 mouse_genomes_project 11 107154638 107156911 - Gm11611 sense_intronic sense_intronic MGP_NODShiLtJ_T0029747.1 MGP_NODShiLtJ_G0018385.1 mouse_genomes_project 11 75955726 75957892 - Wrap53 protein_coding processed_transcript MGP_NODShiLtJ_T0029748.1 MGP_NODShiLtJ_G0018385.1 mouse_genomes_project 11 75955727 75976165 - MGP_NODShiLtJ_P0029748 Wrap53 protein_coding protein_coding MGP_NODShiLtJ_T0029749.1 MGP_NODShiLtJ_G0018385.1 mouse_genomes_project 11 75974548 75977096 - MGP_NODShiLtJ_P0029749 Wrap53 protein_coding protein_coding MGP_NODShiLtJ_T0017078.1 MGP_NODShiLtJ_G0015048.1 mouse_genomes_project 11 72284072 72426133 + Gm12296 processed_transcript processed_transcript MGP_NODShiLtJ_T0011197.1 MGP_NODShiLtJ_G0009330.1 mouse_genomes_project 11 93357474 93357772 - Gm22587 misc_RNA misc_RNA MGP_NODShiLtJ_T0027815.1 MGP_NODShiLtJ_G0017893.1 mouse_genomes_project 11 6314753 6472124 - MGP_NODShiLtJ_P0027815 protein_coding protein_coding MGP_NODShiLtJ_T0027816.1 MGP_NODShiLtJ_G0017893.1 mouse_genomes_project 11 6314820 6437863 - MGP_NODShiLtJ_P0027816 protein_coding protein_coding MGP_NODShiLtJ_T0027817.1 MGP_NODShiLtJ_G0017893.1 mouse_genomes_project 11 6332132 6346940 - protein_coding processed_transcript MGP_NODShiLtJ_T0003062.1 MGP_NODShiLtJ_G0002845.1 mouse_genomes_project 11 1603316 1610756 - Gm11961 antisense antisense MGP_NODShiLtJ_T0003063.1 MGP_NODShiLtJ_G0002845.1 mouse_genomes_project 11 1608365 1612999 - Gm11961 antisense antisense MGP_NODShiLtJ_T0099951.1 MGP_NODShiLtJ_G0038345.1 mouse_genomes_project 11 91151314 91151411 + Snord7 snoRNA snoRNA MGP_NODShiLtJ_T0006187.1 MGP_NODShiLtJ_G0005166.1 mouse_genomes_project 11 67591500 67593650 + Gm26964 lincRNA lincRNA MGP_NODShiLtJ_T0029088.1 MGP_NODShiLtJ_G0018239.1 mouse_genomes_project 11 64641610 64649968 - MGP_NODShiLtJ_P0029088 Iba57 protein_coding protein_coding MGP_NODShiLtJ_T0029089.1 MGP_NODShiLtJ_G0018239.1 mouse_genomes_project 11 64647349 64649546 - MGP_NODShiLtJ_P0029089 Iba57 protein_coding protein_coding MGP_NODShiLtJ_T0029090.1 MGP_NODShiLtJ_G0018239.1 mouse_genomes_project 11 64647581 64649929 - MGP_NODShiLtJ_P0029090 Iba57 protein_coding protein_coding MGP_NODShiLtJ_T0027529.1 MGP_NODShiLtJ_G0017828.1 mouse_genomes_project 11 954223 965210 + Sec14l4 protein_coding processed_transcript MGP_NODShiLtJ_T0027530.1 MGP_NODShiLtJ_G0017828.1 mouse_genomes_project 11 954226 966476 + Sec14l4 protein_coding processed_transcript MGP_NODShiLtJ_T0027531.1 MGP_NODShiLtJ_G0017828.1 mouse_genomes_project 11 954373 966096 + Sec14l4 protein_coding processed_transcript MGP_NODShiLtJ_T0027532.1 MGP_NODShiLtJ_G0017828.1 mouse_genomes_project 11 954543 968269 + Sec14l4 protein_coding processed_transcript MGP_NODShiLtJ_T0027533.1 MGP_NODShiLtJ_G0017828.1 mouse_genomes_project 11 954543 969950 + Sec14l4 protein_coding processed_transcript MGP_NODShiLtJ_T0027534.1 MGP_NODShiLtJ_G0017828.1 mouse_genomes_project 11 954543 969950 + MGP_NODShiLtJ_P0027534 Sec14l4 protein_coding protein_coding MGP_NODShiLtJ_T0027535.1 MGP_NODShiLtJ_G0017828.1 mouse_genomes_project 11 954602 968269 + Sec14l4 protein_coding processed_transcript MGP_NODShiLtJ_T0027536.1 MGP_NODShiLtJ_G0017828.1 mouse_genomes_project 11 964501 968269 + Sec14l4 protein_coding processed_transcript MGP_NODShiLtJ_T0028680.1 MGP_NODShiLtJ_G0018113.1 mouse_genomes_project 11 55552690 55553753 + MGP_NODShiLtJ_P0028680 Olfr1377 protein_coding protein_coding MGP_NODShiLtJ_T0000819.1 MGP_NODShiLtJ_G0000749.1 mouse_genomes_project 11 15154029 15157137 + TEC TEC MGP_NODShiLtJ_T0012380.1 MGP_NODShiLtJ_G0010488.1 mouse_genomes_project 11 17711763 17713854 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099955.1 MGP_NODShiLtJ_G0038349.1 mouse_genomes_project 11 105527123 105527338 + Gm24949 snoRNA snoRNA MGP_NODShiLtJ_T0098691.1 MGP_NODShiLtJ_G0037085.1 mouse_genomes_project 11 75428194 75428295 + Gm25371 snRNA snRNA MGP_NODShiLtJ_T0009667.1 MGP_NODShiLtJ_G0007800.1 mouse_genomes_project 11 117461405 117461472 - Mir3064 miRNA miRNA MGP_NODShiLtJ_T0029132.1 MGP_NODShiLtJ_G0018254.1 mouse_genomes_project 11 65105719 65106812 - MGP_NODShiLtJ_P0029132 Olfr223 protein_coding protein_coding MGP_NODShiLtJ_T0012417.1 MGP_NODShiLtJ_G0010525.1 mouse_genomes_project 11 28979730 28982813 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003105.1 MGP_NODShiLtJ_G0002880.1 mouse_genomes_project 11 55402238 55403489 - Gm12660 antisense antisense MGP_NODShiLtJ_T0031571.1 MGP_NODShiLtJ_G0018829.1 mouse_genomes_project 11 104664556 104672310 + MGP_NODShiLtJ_P0031571 Tac4 protein_coding protein_coding MGP_NODShiLtJ_T0012524.1 MGP_NODShiLtJ_G0010632.1 mouse_genomes_project 11 71053187 71053678 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011195.1 MGP_NODShiLtJ_G0009328.1 mouse_genomes_project 11 79574398 79574590 - Gm22075 misc_RNA misc_RNA MGP_NODShiLtJ_T0028674.1 MGP_NODShiLtJ_G0018110.1 mouse_genomes_project 11 55501057 55504112 - MGP_NODShiLtJ_P0028674 4933414I15Rik protein_coding protein_coding MGP_NODShiLtJ_T0028675.1 MGP_NODShiLtJ_G0018110.1 mouse_genomes_project 11 55502044 55504088 - 4933414I15Rik protein_coding processed_transcript MGP_NODShiLtJ_T0098725.1 MGP_NODShiLtJ_G0037119.1 mouse_genomes_project 11 109778095 109778192 + Gm26324 snRNA snRNA MGP_NODShiLtJ_T0029950.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76487197 76516218 + MGP_NODShiLtJ_P0029950 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029951.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76487353 76502143 + MGP_NODShiLtJ_P0029951 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029952.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76487387 76497027 + Dlg4 protein_coding processed_transcript MGP_NODShiLtJ_T0029953.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76488578 76516218 + MGP_NODShiLtJ_P0029953 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029954.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76488844 76516218 + MGP_NODShiLtJ_P0029954 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029955.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76488980 76502039 + MGP_NODShiLtJ_P0029955 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029956.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76493941 76502021 + MGP_NODShiLtJ_P0029956 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029957.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76496788 76501881 + MGP_NODShiLtJ_P0029957 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029958.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76500631 76509726 + MGP_NODShiLtJ_P0029958 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029959.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76500912 76501800 + MGP_NODShiLtJ_P0029959 Dlg4 protein_coding protein_coding MGP_NODShiLtJ_T0029960.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76501526 76502624 + Dlg4 protein_coding retained_intron MGP_NODShiLtJ_T0029961.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76510504 76515305 + MGP_NODShiLtJ_P0029961 Dlg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029962.1 MGP_NODShiLtJ_G0018427.1 mouse_genomes_project 11 76514882 76515404 + Dlg4 protein_coding retained_intron MGP_NODShiLtJ_T0030639.1 MGP_NODShiLtJ_G0018596.1 mouse_genomes_project 11 84833160 84847302 + MGP_NODShiLtJ_P0030639 Git1 protein_coding protein_coding MGP_NODShiLtJ_T0030640.1 MGP_NODShiLtJ_G0018596.1 mouse_genomes_project 11 84833169 84847302 + MGP_NODShiLtJ_P0030640 Git1 protein_coding protein_coding MGP_NODShiLtJ_T0030641.1 MGP_NODShiLtJ_G0018596.1 mouse_genomes_project 11 84838606 84842631 + Git1 protein_coding retained_intron MGP_NODShiLtJ_T0030642.1 MGP_NODShiLtJ_G0018596.1 mouse_genomes_project 11 84840503 84844601 + Git1 protein_coding retained_intron MGP_NODShiLtJ_T0030643.1 MGP_NODShiLtJ_G0018596.1 mouse_genomes_project 11 84841994 84844348 + Git1 protein_coding retained_intron MGP_NODShiLtJ_T0030644.1 MGP_NODShiLtJ_G0018596.1 mouse_genomes_project 11 84844651 84845555 + Git1 protein_coding retained_intron MGP_NODShiLtJ_T0032576.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113037739 113056518 + MGP_NODShiLtJ_P0032576 Adam11 protein_coding protein_coding MGP_NODShiLtJ_T0032577.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113037739 113056518 + MGP_NODShiLtJ_P0032577 Adam11 protein_coding protein_coding MGP_NODShiLtJ_T0032578.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113038385 113047729 + Adam11 protein_coding processed_transcript MGP_NODShiLtJ_T0032579.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113038482 113048089 + Adam11 protein_coding processed_transcript MGP_NODShiLtJ_T0032580.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113046016 113048022 + Adam11 protein_coding processed_transcript MGP_NODShiLtJ_T0032581.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113047736 113049916 + Adam11 protein_coding processed_transcript MGP_NODShiLtJ_T0032582.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113050335 113052384 + Adam11 protein_coding processed_transcript MGP_NODShiLtJ_T0032583.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113050371 113052661 + Adam11 protein_coding processed_transcript MGP_NODShiLtJ_T0032584.1 MGP_NODShiLtJ_G0019096.1 mouse_genomes_project 11 113052813 113054727 + Adam11 protein_coding processed_transcript MGP_NODShiLtJ_T0009648.1 MGP_NODShiLtJ_G0007781.1 mouse_genomes_project 11 107304464 107304535 - Gm24158 miRNA miRNA MGP_NODShiLtJ_T0009598.1 MGP_NODShiLtJ_G0007731.1 mouse_genomes_project 11 70568164 70568310 - Gm24275 miRNA miRNA MGP_NODShiLtJ_T0030212.1 MGP_NODShiLtJ_G0018477.1 mouse_genomes_project 11 78750743 78845249 - MGP_NODShiLtJ_P0030212 Pitpnm3 protein_coding protein_coding MGP_NODShiLtJ_T0030213.1 MGP_NODShiLtJ_G0018477.1 mouse_genomes_project 11 78750743 78845192 - MGP_NODShiLtJ_P0030213 Pitpnm3 protein_coding protein_coding MGP_NODShiLtJ_T0030214.1 MGP_NODShiLtJ_G0018477.1 mouse_genomes_project 11 78754324 78755265 - Pitpnm3 protein_coding processed_transcript MGP_NODShiLtJ_T0030215.1 MGP_NODShiLtJ_G0018477.1 mouse_genomes_project 11 78760735 78764652 - Pitpnm3 protein_coding retained_intron MGP_NODShiLtJ_T0030216.1 MGP_NODShiLtJ_G0018477.1 mouse_genomes_project 11 78770896 78845249 - Pitpnm3 protein_coding retained_intron MGP_NODShiLtJ_T0027995.1 MGP_NODShiLtJ_G0017935.1 mouse_genomes_project 11 22742811 22848601 - MGP_NODShiLtJ_P0027995 Gm12057 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033141.1 MGP_NODShiLtJ_G0019226.1 mouse_genomes_project 11 126627820 126641097 - MGP_NODShiLtJ_P0033141 protein_coding protein_coding MGP_NODShiLtJ_T0009592.1 MGP_NODShiLtJ_G0007725.1 mouse_genomes_project 11 64412557 64412695 - Gm44313 miRNA miRNA MGP_NODShiLtJ_T0097897.1 MGP_NODShiLtJ_G0036309.1 mouse_genomes_project 11 91658482 91658592 - Gm22311 rRNA rRNA MGP_NODShiLtJ_T0009655.1 MGP_NODShiLtJ_G0007788.1 mouse_genomes_project 11 110446455 110446536 - Gm27374 miRNA miRNA MGP_NODShiLtJ_T0003250.1 MGP_NODShiLtJ_G0002997.1 mouse_genomes_project 11 112178476 112179193 + Gm20659 antisense antisense MGP_NODShiLtJ_T0012597.1 MGP_NODShiLtJ_G0010705.1 mouse_genomes_project 11 102829726 102830937 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012603.1 MGP_NODShiLtJ_G0010711.1 mouse_genomes_project 11 105793723 105794280 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032259.1 MGP_NODShiLtJ_G0019039.1 mouse_genomes_project 11 111247880 111250318 - MGP_NODShiLtJ_P0032259 Ccr10 protein_coding protein_coding MGP_NODShiLtJ_T0098710.1 MGP_NODShiLtJ_G0037104.1 mouse_genomes_project 11 95509555 95509661 - Gm22883 snRNA snRNA MGP_NODShiLtJ_T0033399.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127894964 127920418 - Fbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0033400.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127894964 127899819 - Fbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0033401.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127894964 127920791 - MGP_NODShiLtJ_P0033401 Fbf1 protein_coding protein_coding MGP_NODShiLtJ_T0033402.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127894965 127918552 - MGP_NODShiLtJ_P0033402 Fbf1 protein_coding protein_coding MGP_NODShiLtJ_T0033403.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127895921 127903447 - Fbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0033404.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127907370 127910142 - Fbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0033405.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127907401 127911531 - Fbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0033406.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127907737 127920792 - MGP_NODShiLtJ_P0033406 Fbf1 protein_coding protein_coding MGP_NODShiLtJ_T0033407.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127908628 127918521 - Fbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0033408.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127915966 127920804 - Fbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0033409.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127917317 127920786 - MGP_NODShiLtJ_P0033409 Fbf1 protein_coding protein_coding MGP_NODShiLtJ_T0033410.1 MGP_NODShiLtJ_G0019274.1 mouse_genomes_project 11 127918420 127920403 - Fbf1 protein_coding retained_intron MGP_NODShiLtJ_T0032719.1 MGP_NODShiLtJ_G0019128.1 mouse_genomes_project 11 114707164 114833025 - MGP_NODShiLtJ_P0032719 Kansl1 protein_coding protein_coding MGP_NODShiLtJ_T0032720.1 MGP_NODShiLtJ_G0019128.1 mouse_genomes_project 11 114707436 114833025 - MGP_NODShiLtJ_P0032720 Kansl1 protein_coding protein_coding MGP_NODShiLtJ_T0032721.1 MGP_NODShiLtJ_G0019128.1 mouse_genomes_project 11 114707436 114862829 - MGP_NODShiLtJ_P0032721 Kansl1 protein_coding protein_coding MGP_NODShiLtJ_T0032722.1 MGP_NODShiLtJ_G0019128.1 mouse_genomes_project 11 114707480 114832432 - MGP_NODShiLtJ_P0032722 Kansl1 protein_coding protein_coding MGP_NODShiLtJ_T0032723.1 MGP_NODShiLtJ_G0019128.1 mouse_genomes_project 11 114708856 114716477 - Kansl1 protein_coding processed_transcript MGP_NODShiLtJ_T0032724.1 MGP_NODShiLtJ_G0019128.1 mouse_genomes_project 11 114814967 114861959 - MGP_NODShiLtJ_P0032724 Kansl1 protein_coding protein_coding MGP_NODShiLtJ_T0012465.1 MGP_NODShiLtJ_G0010573.1 mouse_genomes_project 11 52755822 52756353 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003169.1 MGP_NODShiLtJ_G0002935.1 mouse_genomes_project 11 76089105 76099816 + Tnfsf13os antisense antisense MGP_NODShiLtJ_T0003170.1 MGP_NODShiLtJ_G0002935.1 mouse_genomes_project 11 76091296 76100193 + Tnfsf13os antisense antisense MGP_NODShiLtJ_T0003171.1 MGP_NODShiLtJ_G0002935.1 mouse_genomes_project 11 76091468 76100193 + Tnfsf13os antisense antisense MGP_NODShiLtJ_T0028286.1 MGP_NODShiLtJ_G0018003.1 mouse_genomes_project 11 35527731 35579659 - MGP_NODShiLtJ_P0028286 Kcnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028287.1 MGP_NODShiLtJ_G0018003.1 mouse_genomes_project 11 35527739 35756558 - MGP_NODShiLtJ_P0028287 Kcnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028288.1 MGP_NODShiLtJ_G0018003.1 mouse_genomes_project 11 35527739 35756616 - MGP_NODShiLtJ_P0028288 Kcnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028289.1 MGP_NODShiLtJ_G0018003.1 mouse_genomes_project 11 35539165 35916175 - Kcnip1 protein_coding processed_transcript MGP_NODShiLtJ_T0028290.1 MGP_NODShiLtJ_G0018003.1 mouse_genomes_project 11 35539489 35916010 - Kcnip1 protein_coding processed_transcript MGP_NODShiLtJ_T0029477.1 MGP_NODShiLtJ_G0018323.1 mouse_genomes_project 11 70992040 71015856 + MGP_NODShiLtJ_P0029477 Elac2 protein_coding protein_coding MGP_NODShiLtJ_T0029478.1 MGP_NODShiLtJ_G0018323.1 mouse_genomes_project 11 70992073 71015114 + MGP_NODShiLtJ_P0029478 Elac2 protein_coding protein_coding MGP_NODShiLtJ_T0029479.1 MGP_NODShiLtJ_G0018323.1 mouse_genomes_project 11 70992074 70993646 + Elac2 protein_coding processed_transcript MGP_NODShiLtJ_T0029480.1 MGP_NODShiLtJ_G0018323.1 mouse_genomes_project 11 70992076 71015386 + MGP_NODShiLtJ_P0029480 Elac2 protein_coding protein_coding MGP_NODShiLtJ_T0029481.1 MGP_NODShiLtJ_G0018323.1 mouse_genomes_project 11 70992093 71015854 + Elac2 protein_coding processed_transcript MGP_NODShiLtJ_T0029482.1 MGP_NODShiLtJ_G0018323.1 mouse_genomes_project 11 70998459 71005491 + MGP_NODShiLtJ_P0029482 Elac2 protein_coding protein_coding MGP_NODShiLtJ_T0029483.1 MGP_NODShiLtJ_G0018323.1 mouse_genomes_project 11 71014121 71015675 + Elac2 protein_coding processed_transcript MGP_NODShiLtJ_T0006314.1 MGP_NODShiLtJ_G0005259.1 mouse_genomes_project 11 131245463 131249838 + lincRNA lincRNA MGP_NODShiLtJ_T0028306.1 MGP_NODShiLtJ_G0018009.1 mouse_genomes_project 11 36631562 36655825 - MGP_NODShiLtJ_P0028306 Spdl1 protein_coding protein_coding MGP_NODShiLtJ_T0028307.1 MGP_NODShiLtJ_G0018009.1 mouse_genomes_project 11 36643991 36645915 - Spdl1 protein_coding retained_intron MGP_NODShiLtJ_T0028308.1 MGP_NODShiLtJ_G0018009.1 mouse_genomes_project 11 36652350 36655776 - Spdl1 protein_coding retained_intron MGP_NODShiLtJ_T0012341.1 MGP_NODShiLtJ_G0010449.1 mouse_genomes_project 11 1027756 1028226 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006179.1 MGP_NODShiLtJ_G0005159.1 mouse_genomes_project 11 63265855 63268786 - Gm12249 lincRNA lincRNA MGP_NODShiLtJ_T0032382.1 MGP_NODShiLtJ_G0019063.1 mouse_genomes_project 11 111839831 111842118 + MGP_NODShiLtJ_P0032382 Arl4d protein_coding protein_coding MGP_NODShiLtJ_T0027572.1 MGP_NODShiLtJ_G0017838.1 mouse_genomes_project 11 1184019 1211104 + MGP_NODShiLtJ_P0027572 Lif protein_coding protein_coding MGP_NODShiLtJ_T0027573.1 MGP_NODShiLtJ_G0017838.1 mouse_genomes_project 11 1205396 1206853 + Lif protein_coding processed_transcript MGP_NODShiLtJ_T0027574.1 MGP_NODShiLtJ_G0017838.1 mouse_genomes_project 11 1205695 1211104 + MGP_NODShiLtJ_P0027574 Lif protein_coding protein_coding MGP_NODShiLtJ_T0029475.1 MGP_NODShiLtJ_G0018321.1 mouse_genomes_project 11 70394580 70396078 - MGP_NODShiLtJ_P0029475 F930015N05Rik protein_coding protein_coding MGP_NODShiLtJ_T0032936.1 MGP_NODShiLtJ_G0019177.1 mouse_genomes_project 11 118683866 118722121 - MGP_NODShiLtJ_P0032936 Cacng5 protein_coding protein_coding MGP_NODShiLtJ_T0032937.1 MGP_NODShiLtJ_G0019177.1 mouse_genomes_project 11 118683932 118725836 - MGP_NODShiLtJ_P0032937 Cacng5 protein_coding protein_coding MGP_NODShiLtJ_T0028782.1 MGP_NODShiLtJ_G0018139.1 mouse_genomes_project 11 58086179 58146121 - MGP_NODShiLtJ_P0028782 Hspa4 protein_coding protein_coding MGP_NODShiLtJ_T0028783.1 MGP_NODShiLtJ_G0018139.1 mouse_genomes_project 11 58089221 58095407 - Hspa4 protein_coding retained_intron MGP_NODShiLtJ_T0028784.1 MGP_NODShiLtJ_G0018139.1 mouse_genomes_project 11 58090552 58146075 - Hspa4 protein_coding processed_transcript MGP_NODShiLtJ_T0030960.1 MGP_NODShiLtJ_G0018674.1 mouse_genomes_project 11 89811039 89812654 + MGP_NODShiLtJ_P0030960 Ccl8 protein_coding protein_coding MGP_NODShiLtJ_T0027673.1 MGP_NODShiLtJ_G0017857.1 mouse_genomes_project 11 2305028 2509989 - MGP_NODShiLtJ_P0027673 Znrf3 protein_coding protein_coding MGP_NODShiLtJ_T0027674.1 MGP_NODShiLtJ_G0017857.1 mouse_genomes_project 11 2307304 2445537 - MGP_NODShiLtJ_P0027674 Znrf3 protein_coding protein_coding MGP_NODShiLtJ_T0027675.1 MGP_NODShiLtJ_G0017857.1 mouse_genomes_project 11 2317482 2509989 - MGP_NODShiLtJ_P0027675 Znrf3 protein_coding protein_coding MGP_NODShiLtJ_T0006184.1 MGP_NODShiLtJ_G0005164.1 mouse_genomes_project 11 66512758 66521823 + Gm26534 lincRNA lincRNA MGP_NODShiLtJ_T0012660.1 MGP_NODShiLtJ_G0010768.1 mouse_genomes_project 11 127460363 127460577 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028564.1 MGP_NODShiLtJ_G0018085.1 mouse_genomes_project 11 53935644 53936864 + MGP_NODShiLtJ_P0028564 Olfr1384 protein_coding protein_coding MGP_NODShiLtJ_T0003289.1 MGP_NODShiLtJ_G0003030.1 mouse_genomes_project 11 127154607 127156017 - Gm11695 antisense antisense MGP_NODShiLtJ_T0030970.1 MGP_NODShiLtJ_G0018678.1 mouse_genomes_project 11 90512547 90514138 + MGP_NODShiLtJ_P0030970 Zfp830 protein_coding protein_coding MGP_NODShiLtJ_T0017135.1 MGP_NODShiLtJ_G0015082.1 mouse_genomes_project 11 114042469 114043052 + Gm11642 processed_transcript processed_transcript MGP_NODShiLtJ_T0012663.1 MGP_NODShiLtJ_G0010771.1 mouse_genomes_project 11 128333655 128333889 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032409.1 MGP_NODShiLtJ_G0019069.1 mouse_genomes_project 11 112191600 112199551 + MGP_NODShiLtJ_P0032409 1700006E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0032410.1 MGP_NODShiLtJ_G0019069.1 mouse_genomes_project 11 112191605 112198145 + MGP_NODShiLtJ_P0032410 1700006E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0032411.1 MGP_NODShiLtJ_G0019069.1 mouse_genomes_project 11 112194374 112199559 + MGP_NODShiLtJ_P0032411 1700006E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0033177.1 MGP_NODShiLtJ_G0019236.1 mouse_genomes_project 11 126986559 127012786 + MGP_NODShiLtJ_P0033177 Otop2 protein_coding protein_coding MGP_NODShiLtJ_T0033179.1 MGP_NODShiLtJ_G0019236.1 mouse_genomes_project 11 127001951 127002933 + Otop2 protein_coding processed_transcript MGP_NODShiLtJ_T0033180.1 MGP_NODShiLtJ_G0019236.1 mouse_genomes_project 11 127002182 127002926 + Otop2 protein_coding processed_transcript MGP_NODShiLtJ_T0033181.1 MGP_NODShiLtJ_G0019236.1 mouse_genomes_project 11 127002346 127012786 + MGP_NODShiLtJ_P0033181 Otop2 protein_coding protein_coding MGP_NODShiLtJ_T0031376.1 MGP_NODShiLtJ_G0018781.1 mouse_genomes_project 11 97516420 97535390 + MGP_NODShiLtJ_P0031376 Gm525 protein_coding protein_coding MGP_NODShiLtJ_T0031377.1 MGP_NODShiLtJ_G0018781.1 mouse_genomes_project 11 97518693 97535315 + MGP_NODShiLtJ_P0031377 Gm525 protein_coding protein_coding MGP_NODShiLtJ_T0098683.1 MGP_NODShiLtJ_G0037077.1 mouse_genomes_project 11 59428246 59428354 + Gm24198 snRNA snRNA MGP_NODShiLtJ_T0034041.1 MGP_NODShiLtJ_G0019400.1 mouse_genomes_project 11 133438761 133457310 + MGP_NODShiLtJ_P0034041 Narf protein_coding protein_coding MGP_NODShiLtJ_T0034042.1 MGP_NODShiLtJ_G0019400.1 mouse_genomes_project 11 133446077 133446988 + Narf protein_coding retained_intron MGP_NODShiLtJ_T0034043.1 MGP_NODShiLtJ_G0019400.1 mouse_genomes_project 11 133446559 133447351 + Narf protein_coding retained_intron MGP_NODShiLtJ_T0012344.1 MGP_NODShiLtJ_G0010452.1 mouse_genomes_project 11 2579464 2579719 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099961.1 MGP_NODShiLtJ_G0038355.1 mouse_genomes_project 11 113110663 113110800 + Gm22683 snoRNA snoRNA MGP_NODShiLtJ_T0029236.1 MGP_NODShiLtJ_G0018274.1 mouse_genomes_project 11 66342697 66347251 + MGP_NODShiLtJ_P0029236 Mief2 protein_coding protein_coding MGP_NODShiLtJ_T0029237.1 MGP_NODShiLtJ_G0018274.1 mouse_genomes_project 11 66342742 66345296 + Mief2 protein_coding retained_intron MGP_NODShiLtJ_T0029238.1 MGP_NODShiLtJ_G0018274.1 mouse_genomes_project 11 66342744 66344963 + Mief2 protein_coding processed_transcript MGP_NODShiLtJ_T0012450.1 MGP_NODShiLtJ_G0010558.1 mouse_genomes_project 11 43649270 43649616 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032113.1 MGP_NODShiLtJ_G0019007.1 mouse_genomes_project 11 110418154 110428876 + MGP_NODShiLtJ_P0032113 Fkbp10 protein_coding protein_coding MGP_NODShiLtJ_T0032114.1 MGP_NODShiLtJ_G0019007.1 mouse_genomes_project 11 110418223 110428164 + MGP_NODShiLtJ_P0032114 Fkbp10 protein_coding protein_coding MGP_NODShiLtJ_T0032115.1 MGP_NODShiLtJ_G0019007.1 mouse_genomes_project 11 110418302 110426141 + MGP_NODShiLtJ_P0032115 Fkbp10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032116.1 MGP_NODShiLtJ_G0019007.1 mouse_genomes_project 11 110424475 110425748 + Fkbp10 protein_coding retained_intron MGP_NODShiLtJ_T0032119.1 MGP_NODShiLtJ_G0019007.1 mouse_genomes_project 11 110427089 110428352 + Fkbp10 protein_coding retained_intron MGP_NODShiLtJ_T0031264.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95813782 95831052 + MGP_NODShiLtJ_P0031264 Sept4 protein_coding protein_coding MGP_NODShiLtJ_T0031265.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95823272 95836353 + MGP_NODShiLtJ_P0031265 Sept4 protein_coding protein_coding MGP_NODShiLtJ_T0031266.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95823283 95835000 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031267.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95823295 95836351 + MGP_NODShiLtJ_P0031267 Sept4 protein_coding protein_coding MGP_NODShiLtJ_T0031268.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95823318 95836353 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031269.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95823327 95831842 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031270.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95823341 95836353 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031271.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95823355 95831670 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031272.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95823799 95835088 + MGP_NODShiLtJ_P0031272 Sept4 protein_coding protein_coding MGP_NODShiLtJ_T0031273.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95825937 95836189 + MGP_NODShiLtJ_P0031273 Sept4 protein_coding protein_coding MGP_NODShiLtJ_T0031274.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95825945 95831842 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031275.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95825950 95836353 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031276.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95826042 95836359 + MGP_NODShiLtJ_P0031276 Sept4 protein_coding protein_coding MGP_NODShiLtJ_T0031277.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95827085 95834855 + MGP_NODShiLtJ_P0031277 Sept4 protein_coding protein_coding MGP_NODShiLtJ_T0031278.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95831035 95835678 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031279.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95834681 95835808 + Sept4 protein_coding retained_intron MGP_NODShiLtJ_T0031280.1 MGP_NODShiLtJ_G0018755.1 mouse_genomes_project 11 95835290 95836353 + Sept4 protein_coding processed_transcript MGP_NODShiLtJ_T0027452.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 172219 184779 + MGP_NODShiLtJ_P0027452 Pik3ip1 protein_coding protein_coding MGP_NODShiLtJ_T0027453.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 172546 173917 + Pik3ip1 protein_coding retained_intron MGP_NODShiLtJ_T0027454.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 172605 183491 + MGP_NODShiLtJ_P0027454 Pik3ip1 protein_coding protein_coding MGP_NODShiLtJ_T0027455.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 172611 175776 + Pik3ip1 protein_coding retained_intron MGP_NODShiLtJ_T0027456.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 172626 175778 + MGP_NODShiLtJ_P0027456 Pik3ip1 protein_coding protein_coding MGP_NODShiLtJ_T0027457.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 173885 175493 + Pik3ip1 protein_coding retained_intron MGP_NODShiLtJ_T0027458.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 173922 183482 + MGP_NODShiLtJ_P0027458 Pik3ip1 protein_coding protein_coding MGP_NODShiLtJ_T0027459.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 174264 183500 + MGP_NODShiLtJ_P0027459 Pik3ip1 protein_coding protein_coding MGP_NODShiLtJ_T0027460.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 174785 175774 + Pik3ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0027461.1 MGP_NODShiLtJ_G0017812.1 mouse_genomes_project 11 176206 183813 + Pik3ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0032061.1 MGP_NODShiLtJ_G0018981.1 mouse_genomes_project 11 109881847 109891688 + MGP_NODShiLtJ_P0032061 protein_coding protein_coding MGP_NODShiLtJ_T0003266.1 MGP_NODShiLtJ_G0003012.1 mouse_genomes_project 11 117496322 117497661 - Gm11706 antisense antisense MGP_NODShiLtJ_T0009680.1 MGP_NODShiLtJ_G0007813.1 mouse_genomes_project 11 131438175 131438265 + Mir1932 miRNA miRNA MGP_NODShiLtJ_T0028338.1 MGP_NODShiLtJ_G0018017.1 mouse_genomes_project 11 43752978 43788194 - MGP_NODShiLtJ_P0028338 Hmmr protein_coding protein_coding MGP_NODShiLtJ_T0028339.1 MGP_NODShiLtJ_G0018017.1 mouse_genomes_project 11 43774522 43788188 - Hmmr protein_coding processed_transcript MGP_NODShiLtJ_T0028340.1 MGP_NODShiLtJ_G0018017.1 mouse_genomes_project 11 43776456 43788188 - Hmmr protein_coding processed_transcript MGP_NODShiLtJ_T0028341.1 MGP_NODShiLtJ_G0018017.1 mouse_genomes_project 11 43778250 43788163 - Hmmr protein_coding processed_transcript MGP_NODShiLtJ_T0012519.1 MGP_NODShiLtJ_G0010627.1 mouse_genomes_project 11 68095372 68095673 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028562.1 MGP_NODShiLtJ_G0018083.1 mouse_genomes_project 11 53911831 53923325 + MGP_NODShiLtJ_P0028562 Olfr1386 protein_coding protein_coding MGP_NODShiLtJ_T0028556.1 MGP_NODShiLtJ_G0018077.1 mouse_genomes_project 11 53664480 53673781 + MGP_NODShiLtJ_P0028556 protein_coding protein_coding MGP_NODShiLtJ_T0012399.1 MGP_NODShiLtJ_G0010507.1 mouse_genomes_project 11 21181872 21182085 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032816.1 MGP_NODShiLtJ_G0019151.1 mouse_genomes_project 11 116837690 116871847 + MGP_NODShiLtJ_P0032816 Ddx42 protein_coding protein_coding MGP_NODShiLtJ_T0032817.1 MGP_NODShiLtJ_G0019151.1 mouse_genomes_project 11 116858985 116861515 + Ddx42 protein_coding processed_transcript MGP_NODShiLtJ_T0009673.1 MGP_NODShiLtJ_G0007806.1 mouse_genomes_project 11 127140598 127140698 - Mir3968 miRNA miRNA MGP_NODShiLtJ_T0029620.1 MGP_NODShiLtJ_G0018358.1 mouse_genomes_project 11 75288172 75300031 - MGP_NODShiLtJ_P0029620 Arhgef15 protein_coding protein_coding MGP_NODShiLtJ_T0029621.1 MGP_NODShiLtJ_G0018358.1 mouse_genomes_project 11 75288174 75302913 - MGP_NODShiLtJ_P0029621 Arhgef15 protein_coding protein_coding MGP_NODShiLtJ_T0029622.1 MGP_NODShiLtJ_G0018358.1 mouse_genomes_project 11 75289544 75292398 - Arhgef15 protein_coding processed_transcript MGP_NODShiLtJ_T0029623.1 MGP_NODShiLtJ_G0018358.1 mouse_genomes_project 11 75291318 75292769 - Arhgef15 protein_coding processed_transcript MGP_NODShiLtJ_T0029624.1 MGP_NODShiLtJ_G0018358.1 mouse_genomes_project 11 75291464 75292609 - Arhgef15 protein_coding processed_transcript MGP_NODShiLtJ_T0029625.1 MGP_NODShiLtJ_G0018358.1 mouse_genomes_project 11 75293188 75297131 - Arhgef15 protein_coding retained_intron MGP_NODShiLtJ_T0030946.1 MGP_NODShiLtJ_G0018665.1 mouse_genomes_project 11 88466828 88479857 + MGP_NODShiLtJ_P0030946 Tmem98 protein_coding protein_coding MGP_NODShiLtJ_T0033171.1 MGP_NODShiLtJ_G0019234.1 mouse_genomes_project 11 126942062 126952646 - Fdxr protein_coding processed_transcript MGP_NODShiLtJ_T0033172.1 MGP_NODShiLtJ_G0019234.1 mouse_genomes_project 11 126942062 126952782 - MGP_NODShiLtJ_P0033172 Fdxr protein_coding protein_coding MGP_NODShiLtJ_T0033173.1 MGP_NODShiLtJ_G0019234.1 mouse_genomes_project 11 126942386 126943053 - Fdxr protein_coding processed_transcript MGP_NODShiLtJ_T0033174.1 MGP_NODShiLtJ_G0019234.1 mouse_genomes_project 11 126947558 126952456 - Fdxr protein_coding processed_transcript MGP_NODShiLtJ_T0028820.1 MGP_NODShiLtJ_G0018151.1 mouse_genomes_project 11 58454715 58489943 + MGP_NODShiLtJ_P0028820 Kif3a protein_coding protein_coding MGP_NODShiLtJ_T0028821.1 MGP_NODShiLtJ_G0018151.1 mouse_genomes_project 11 58454715 58489198 + MGP_NODShiLtJ_P0028821 Kif3a protein_coding protein_coding MGP_NODShiLtJ_T0028822.1 MGP_NODShiLtJ_G0018151.1 mouse_genomes_project 11 58454733 58489195 + MGP_NODShiLtJ_P0028822 Kif3a protein_coding protein_coding MGP_NODShiLtJ_T0028823.1 MGP_NODShiLtJ_G0018151.1 mouse_genomes_project 11 58454862 58489152 + MGP_NODShiLtJ_P0028823 Kif3a protein_coding protein_coding MGP_NODShiLtJ_T0028824.1 MGP_NODShiLtJ_G0018151.1 mouse_genomes_project 11 58455044 58466475 + Kif3a protein_coding processed_transcript MGP_NODShiLtJ_T0028825.1 MGP_NODShiLtJ_G0018151.1 mouse_genomes_project 11 58455189 58467139 + MGP_NODShiLtJ_P0028825 Kif3a protein_coding protein_coding MGP_NODShiLtJ_T0028826.1 MGP_NODShiLtJ_G0018151.1 mouse_genomes_project 11 58466459 58474276 + MGP_NODShiLtJ_P0028826 Kif3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028827.1 MGP_NODShiLtJ_G0018151.1 mouse_genomes_project 11 58481395 58489393 + MGP_NODShiLtJ_P0028827 Kif3a protein_coding protein_coding MGP_NODShiLtJ_T0029677.1 MGP_NODShiLtJ_G0018367.1 mouse_genomes_project 11 75449594 75460732 + MGP_NODShiLtJ_P0029677 Per1 protein_coding protein_coding MGP_NODShiLtJ_T0029678.1 MGP_NODShiLtJ_G0018367.1 mouse_genomes_project 11 75453221 75464234 + MGP_NODShiLtJ_P0029678 Per1 protein_coding protein_coding MGP_NODShiLtJ_T0029679.1 MGP_NODShiLtJ_G0018367.1 mouse_genomes_project 11 75454425 75455322 + MGP_NODShiLtJ_P0029679 Per1 protein_coding protein_coding MGP_NODShiLtJ_T0029680.1 MGP_NODShiLtJ_G0018367.1 mouse_genomes_project 11 75454431 75464222 + MGP_NODShiLtJ_P0029680 Per1 protein_coding protein_coding MGP_NODShiLtJ_T0029681.1 MGP_NODShiLtJ_G0018367.1 mouse_genomes_project 11 75454782 75460570 + MGP_NODShiLtJ_P0029681 Per1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029682.1 MGP_NODShiLtJ_G0018367.1 mouse_genomes_project 11 75454795 75464234 + MGP_NODShiLtJ_P0029682 Per1 protein_coding protein_coding MGP_NODShiLtJ_T0003229.1 MGP_NODShiLtJ_G0002981.1 mouse_genomes_project 11 107205352 107214844 + antisense antisense MGP_NODShiLtJ_T0012532.1 MGP_NODShiLtJ_G0010640.1 mouse_genomes_project 11 76177754 76178344 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030255.1 MGP_NODShiLtJ_G0018489.1 mouse_genomes_project 11 79183542 79226711 - MGP_NODShiLtJ_P0030255 Spns2 protein_coding protein_coding MGP_NODShiLtJ_T0030256.1 MGP_NODShiLtJ_G0018489.1 mouse_genomes_project 11 79183546 79186446 - Spns2 protein_coding retained_intron MGP_NODShiLtJ_T0030257.1 MGP_NODShiLtJ_G0018489.1 mouse_genomes_project 11 79184512 79188255 - Spns2 protein_coding processed_transcript MGP_NODShiLtJ_T0030258.1 MGP_NODShiLtJ_G0018489.1 mouse_genomes_project 11 79184636 79188526 - MGP_NODShiLtJ_P0030258 Spns2 protein_coding protein_coding MGP_NODShiLtJ_T0030259.1 MGP_NODShiLtJ_G0018489.1 mouse_genomes_project 11 79184745 79186023 - Spns2 protein_coding processed_transcript MGP_NODShiLtJ_T0030260.1 MGP_NODShiLtJ_G0018489.1 mouse_genomes_project 11 79190933 79206932 - Spns2 protein_coding processed_transcript MGP_NODShiLtJ_T0029142.1 MGP_NODShiLtJ_G0018256.1 mouse_genomes_project 11 65313470 65317253 - Pld6 protein_coding processed_transcript MGP_NODShiLtJ_T0029143.1 MGP_NODShiLtJ_G0018256.1 mouse_genomes_project 11 65314310 65317250 - MGP_NODShiLtJ_P0029143 Pld6 protein_coding protein_coding MGP_NODShiLtJ_T0028795.1 MGP_NODShiLtJ_G0018142.1 mouse_genomes_project 11 58297001 58297985 - MGP_NODShiLtJ_P0028795 Leap2 protein_coding protein_coding MGP_NODShiLtJ_T0012472.1 MGP_NODShiLtJ_G0010580.1 mouse_genomes_project 11 54634483 54635487 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006317.1 MGP_NODShiLtJ_G0005262.1 mouse_genomes_project 11 132774695 132776053 + Gm17586 lincRNA lincRNA MGP_NODShiLtJ_T0101557.1 MGP_NODShiLtJ_G0039727.1 mouse_genomes_project 11 83342300 83342762 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003110.1 MGP_NODShiLtJ_G0002885.1 mouse_genomes_project 11 57924914 57938790 - Gm11186 antisense antisense MGP_NODShiLtJ_T0099936.1 MGP_NODShiLtJ_G0038330.1 mouse_genomes_project 11 76075808 76075952 - Gm25835 snoRNA snoRNA MGP_NODShiLtJ_T0033490.1 MGP_NODShiLtJ_G0019290.1 mouse_genomes_project 11 128381315 128411254 - MGP_NODShiLtJ_P0033490 Rhbdf2 protein_coding protein_coding MGP_NODShiLtJ_T0033491.1 MGP_NODShiLtJ_G0019290.1 mouse_genomes_project 11 128381319 128415868 - MGP_NODShiLtJ_P0033491 Rhbdf2 protein_coding protein_coding MGP_NODShiLtJ_T0033492.1 MGP_NODShiLtJ_G0019290.1 mouse_genomes_project 11 128384236 128385745 - Rhbdf2 protein_coding processed_transcript MGP_NODShiLtJ_T0033493.1 MGP_NODShiLtJ_G0019290.1 mouse_genomes_project 11 128386402 128411301 - Rhbdf2 protein_coding retained_intron MGP_NODShiLtJ_T0017128.1 MGP_NODShiLtJ_G0015076.1 mouse_genomes_project 11 108080190 108087784 - 1700003D09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0003198.1 MGP_NODShiLtJ_G0002958.1 mouse_genomes_project 11 94320556 94330402 + Brip1os antisense antisense MGP_NODShiLtJ_T0003199.1 MGP_NODShiLtJ_G0002958.1 mouse_genomes_project 11 94320569 94439767 + Brip1os antisense antisense MGP_NODShiLtJ_T0033075.1 MGP_NODShiLtJ_G0019208.1 mouse_genomes_project 11 125136546 125153359 - MGP_NODShiLtJ_P0033075 Cpsf4l protein_coding protein_coding MGP_NODShiLtJ_T0033076.1 MGP_NODShiLtJ_G0019208.1 mouse_genomes_project 11 125136546 125152862 - MGP_NODShiLtJ_P0033076 Cpsf4l protein_coding protein_coding MGP_NODShiLtJ_T0033077.1 MGP_NODShiLtJ_G0019208.1 mouse_genomes_project 11 125136546 125152868 - MGP_NODShiLtJ_P0033077 Cpsf4l protein_coding protein_coding MGP_NODShiLtJ_T0033078.1 MGP_NODShiLtJ_G0019208.1 mouse_genomes_project 11 125136546 125152309 - MGP_NODShiLtJ_P0033078 Cpsf4l protein_coding protein_coding MGP_NODShiLtJ_T0033079.1 MGP_NODShiLtJ_G0019208.1 mouse_genomes_project 11 125142308 125152866 - Cpsf4l protein_coding retained_intron MGP_NODShiLtJ_T0032606.1 MGP_NODShiLtJ_G0019100.1 mouse_genomes_project 11 113163806 113167819 + MGP_NODShiLtJ_P0032606 Ccdc103 protein_coding protein_coding MGP_NODShiLtJ_T0032607.1 MGP_NODShiLtJ_G0019100.1 mouse_genomes_project 11 113163847 113167126 + MGP_NODShiLtJ_P0032607 Ccdc103 protein_coding protein_coding MGP_NODShiLtJ_T0028410.1 MGP_NODShiLtJ_G0018036.1 mouse_genomes_project 11 48301449 48318719 - MGP_NODShiLtJ_P0028410 Ublcp1 protein_coding protein_coding MGP_NODShiLtJ_T0028411.1 MGP_NODShiLtJ_G0018036.1 mouse_genomes_project 11 48301451 48307709 - Ublcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0028412.1 MGP_NODShiLtJ_G0018036.1 mouse_genomes_project 11 48301451 48305121 - Ublcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0028413.1 MGP_NODShiLtJ_G0018036.1 mouse_genomes_project 11 48302430 48312320 - Ublcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0028414.1 MGP_NODShiLtJ_G0018036.1 mouse_genomes_project 11 48303134 48308232 - Ublcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0028415.1 MGP_NODShiLtJ_G0018036.1 mouse_genomes_project 11 48313845 48315299 - Ublcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031657.1 MGP_NODShiLtJ_G0018855.1 mouse_genomes_project 11 105855076 105857862 + Hoxb5 protein_coding retained_intron MGP_NODShiLtJ_T0031658.1 MGP_NODShiLtJ_G0018855.1 mouse_genomes_project 11 105855252 105857861 + MGP_NODShiLtJ_P0031658 Hoxb5 protein_coding protein_coding MGP_NODShiLtJ_T0032037.1 MGP_NODShiLtJ_G0018957.1 mouse_genomes_project 11 109484532 109485019 - MGP_NODShiLtJ_P0032037 protein_coding protein_coding MGP_NODShiLtJ_T0031917.1 MGP_NODShiLtJ_G0018914.1 mouse_genomes_project 11 108325112 108332159 - MGP_NODShiLtJ_P0031917 Ormdl3 protein_coding protein_coding MGP_NODShiLtJ_T0028146.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31124651 31180109 + MGP_NODShiLtJ_P0028146 Rtn4 protein_coding protein_coding MGP_NODShiLtJ_T0028147.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31124651 31181522 + MGP_NODShiLtJ_P0028147 Rtn4 protein_coding protein_coding MGP_NODShiLtJ_T0028148.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31124651 31180109 + MGP_NODShiLtJ_P0028148 Rtn4 protein_coding protein_coding MGP_NODShiLtJ_T0028149.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31124652 31179282 + MGP_NODShiLtJ_P0028149 Rtn4 protein_coding protein_coding MGP_NODShiLtJ_T0028150.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31125478 31180109 + MGP_NODShiLtJ_P0028150 Rtn4 protein_coding protein_coding MGP_NODShiLtJ_T0028151.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31153399 31180109 + MGP_NODShiLtJ_P0028151 Rtn4 protein_coding protein_coding MGP_NODShiLtJ_T0028152.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31169700 31179610 + Rtn4 protein_coding processed_transcript MGP_NODShiLtJ_T0028153.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31169775 31179522 + Rtn4 protein_coding processed_transcript MGP_NODShiLtJ_T0028154.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31172397 31179522 + Rtn4 protein_coding processed_transcript MGP_NODShiLtJ_T0028155.1 MGP_NODShiLtJ_G0017967.1 mouse_genomes_project 11 31178175 31179460 + Rtn4 protein_coding processed_transcript MGP_NODShiLtJ_T0029655.1 MGP_NODShiLtJ_G0018363.1 mouse_genomes_project 11 75398881 75404899 + MGP_NODShiLtJ_P0029655 Aurkb protein_coding protein_coding MGP_NODShiLtJ_T0029656.1 MGP_NODShiLtJ_G0018363.1 mouse_genomes_project 11 75398886 75404899 + MGP_NODShiLtJ_P0029656 Aurkb protein_coding protein_coding MGP_NODShiLtJ_T0029657.1 MGP_NODShiLtJ_G0018363.1 mouse_genomes_project 11 75398905 75401453 + Aurkb protein_coding processed_transcript MGP_NODShiLtJ_T0029658.1 MGP_NODShiLtJ_G0018363.1 mouse_genomes_project 11 75398924 75401531 + Aurkb protein_coding retained_intron MGP_NODShiLtJ_T0029659.1 MGP_NODShiLtJ_G0018363.1 mouse_genomes_project 11 75401211 75402308 + Aurkb protein_coding retained_intron MGP_NODShiLtJ_T0029660.1 MGP_NODShiLtJ_G0018363.1 mouse_genomes_project 11 75401762 75402310 + Aurkb protein_coding retained_intron MGP_NODShiLtJ_T0029661.1 MGP_NODShiLtJ_G0018363.1 mouse_genomes_project 11 75401803 75403972 + Aurkb protein_coding retained_intron MGP_NODShiLtJ_T0029662.1 MGP_NODShiLtJ_G0018363.1 mouse_genomes_project 11 75403797 75404374 + Aurkb protein_coding processed_transcript MGP_NODShiLtJ_T0029422.1 MGP_NODShiLtJ_G0018307.1 mouse_genomes_project 11 68377357 68403073 + Trpv2 protein_coding processed_transcript MGP_NODShiLtJ_T0029423.1 MGP_NODShiLtJ_G0018307.1 mouse_genomes_project 11 68377409 68404586 + MGP_NODShiLtJ_P0029423 Trpv2 protein_coding protein_coding MGP_NODShiLtJ_T0029424.1 MGP_NODShiLtJ_G0018307.1 mouse_genomes_project 11 68378422 68384271 + Trpv2 protein_coding processed_transcript MGP_NODShiLtJ_T0029425.1 MGP_NODShiLtJ_G0018307.1 mouse_genomes_project 11 68379019 68403073 + MGP_NODShiLtJ_P0029425 Trpv2 protein_coding protein_coding MGP_NODShiLtJ_T0029426.1 MGP_NODShiLtJ_G0018307.1 mouse_genomes_project 11 68384233 68403073 + Trpv2 protein_coding processed_transcript MGP_NODShiLtJ_T0009602.1 MGP_NODShiLtJ_G0007735.1 mouse_genomes_project 11 74500525 74500645 + Mir6406 miRNA miRNA MGP_NODShiLtJ_T0029303.1 MGP_NODShiLtJ_G0018289.1 mouse_genomes_project 11 67121742 67127406 - MGP_NODShiLtJ_P0029303 Rnf112 protein_coding protein_coding MGP_NODShiLtJ_T0029304.1 MGP_NODShiLtJ_G0018289.1 mouse_genomes_project 11 67121742 67127305 - MGP_NODShiLtJ_P0029304 Rnf112 protein_coding protein_coding MGP_NODShiLtJ_T0029305.1 MGP_NODShiLtJ_G0018289.1 mouse_genomes_project 11 67121742 67127305 - MGP_NODShiLtJ_P0029305 Rnf112 protein_coding protein_coding MGP_NODShiLtJ_T0029306.1 MGP_NODShiLtJ_G0018289.1 mouse_genomes_project 11 67125345 67127431 - Rnf112 protein_coding processed_transcript MGP_NODShiLtJ_T0029307.1 MGP_NODShiLtJ_G0018289.1 mouse_genomes_project 11 67125563 67127219 - Rnf112 protein_coding processed_transcript MGP_NODShiLtJ_T0029308.1 MGP_NODShiLtJ_G0018289.1 mouse_genomes_project 11 67126035 67127242 - Rnf112 protein_coding processed_transcript MGP_NODShiLtJ_T0029309.1 MGP_NODShiLtJ_G0018289.1 mouse_genomes_project 11 67126216 67127233 - Rnf112 protein_coding processed_transcript MGP_NODShiLtJ_T0003182.1 MGP_NODShiLtJ_G0002946.1 mouse_genomes_project 11 87114270 87130347 - Rab11fip4os1 antisense antisense MGP_NODShiLtJ_T0099967.1 MGP_NODShiLtJ_G0038361.1 mouse_genomes_project 11 128462231 128462307 + Snord1c snoRNA snoRNA MGP_NODShiLtJ_T0006225.1 MGP_NODShiLtJ_G0005195.1 mouse_genomes_project 11 87573742 87579731 - Gm26563 lincRNA lincRNA MGP_NODShiLtJ_T0006226.1 MGP_NODShiLtJ_G0005195.1 mouse_genomes_project 11 87575761 87587390 - Gm26563 lincRNA lincRNA MGP_NODShiLtJ_T0033050.1 MGP_NODShiLtJ_G0019202.1 mouse_genomes_project 11 124129240 124136228 + MGP_NODShiLtJ_P0033050 Sox9 protein_coding protein_coding MGP_NODShiLtJ_T0032790.1 MGP_NODShiLtJ_G0019142.1 mouse_genomes_project 11 116604135 116614878 + MGP_NODShiLtJ_P0032790 Ace3 protein_coding protein_coding MGP_NODShiLtJ_T0028509.1 MGP_NODShiLtJ_G0018065.1 mouse_genomes_project 11 53342957 53359294 - MGP_NODShiLtJ_P0028509 protein_coding protein_coding MGP_NODShiLtJ_T0030441.1 MGP_NODShiLtJ_G0018553.1 mouse_genomes_project 11 82305858 82308752 - MGP_NODShiLtJ_P0030441 Ovca2 protein_coding protein_coding MGP_NODShiLtJ_T0030444.1 MGP_NODShiLtJ_G0018553.1 mouse_genomes_project 11 82307717 82308704 - Ovca2 protein_coding processed_transcript MGP_NODShiLtJ_T0012361.1 MGP_NODShiLtJ_G0010469.1 mouse_genomes_project 11 7926683 7927598 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032688.1 MGP_NODShiLtJ_G0019121.1 mouse_genomes_project 11 114045881 114068339 - MGP_NODShiLtJ_P0032688 Wnt9b protein_coding protein_coding MGP_NODShiLtJ_T0009618.1 MGP_NODShiLtJ_G0007751.1 mouse_genomes_project 11 79733439 79733529 + Gm44467 miRNA miRNA MGP_NODShiLtJ_T0027633.1 MGP_NODShiLtJ_G0017852.1 mouse_genomes_project 11 2075424 2077670 + MGP_NODShiLtJ_P0027633 Rasl10a protein_coding protein_coding MGP_NODShiLtJ_T0027634.1 MGP_NODShiLtJ_G0017852.1 mouse_genomes_project 11 2076240 2077347 + Rasl10a protein_coding processed_transcript MGP_NODShiLtJ_T0012547.1 MGP_NODShiLtJ_G0010655.1 mouse_genomes_project 11 80741345 80743165 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006145.1 MGP_NODShiLtJ_G0005128.1 mouse_genomes_project 11 33447544 33483466 - D630024D03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006146.1 MGP_NODShiLtJ_G0005128.1 mouse_genomes_project 11 33458374 33483517 - D630024D03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006147.1 MGP_NODShiLtJ_G0005128.1 mouse_genomes_project 11 33477077 33483466 - D630024D03Rik lincRNA lincRNA MGP_NODShiLtJ_T0032292.1 MGP_NODShiLtJ_G0019045.1 mouse_genomes_project 11 111367697 111376792 + Cntd1 protein_coding processed_transcript MGP_NODShiLtJ_T0032293.1 MGP_NODShiLtJ_G0019045.1 mouse_genomes_project 11 111367781 111378942 + MGP_NODShiLtJ_P0032293 Cntd1 protein_coding protein_coding MGP_NODShiLtJ_T0032294.1 MGP_NODShiLtJ_G0019045.1 mouse_genomes_project 11 111376301 111386933 + Cntd1 protein_coding processed_transcript MGP_NODShiLtJ_T0003189.1 MGP_NODShiLtJ_G0002952.1 mouse_genomes_project 11 89245299 89251404 + Gm11418 antisense antisense MGP_NODShiLtJ_T0012379.1 MGP_NODShiLtJ_G0010487.1 mouse_genomes_project 11 17559278 17559810 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009649.1 MGP_NODShiLtJ_G0007782.1 mouse_genomes_project 11 107323461 107323532 + Mir6927 miRNA miRNA MGP_NODShiLtJ_T0031396.1 MGP_NODShiLtJ_G0018789.1 mouse_genomes_project 11 99021518 99214162 - MGP_NODShiLtJ_P0031396 Stxbp4 protein_coding protein_coding MGP_NODShiLtJ_T0031397.1 MGP_NODShiLtJ_G0018789.1 mouse_genomes_project 11 99049702 99110389 - MGP_NODShiLtJ_P0031397 Stxbp4 protein_coding protein_coding MGP_NODShiLtJ_T0031398.1 MGP_NODShiLtJ_G0018789.1 mouse_genomes_project 11 99091130 99214140 - MGP_NODShiLtJ_P0031398 Stxbp4 protein_coding protein_coding MGP_NODShiLtJ_T0031399.1 MGP_NODShiLtJ_G0018789.1 mouse_genomes_project 11 99162239 99214143 - MGP_NODShiLtJ_P0031399 Stxbp4 protein_coding protein_coding MGP_NODShiLtJ_T0031400.1 MGP_NODShiLtJ_G0018789.1 mouse_genomes_project 11 99176365 99214154 - MGP_NODShiLtJ_P0031400 Stxbp4 protein_coding protein_coding MGP_NODShiLtJ_T0031401.1 MGP_NODShiLtJ_G0018789.1 mouse_genomes_project 11 99194114 99206414 - MGP_NODShiLtJ_P0031401 Stxbp4 protein_coding protein_coding MGP_NODShiLtJ_T0031402.1 MGP_NODShiLtJ_G0018789.1 mouse_genomes_project 11 99205707 99214151 - Stxbp4 protein_coding processed_transcript MGP_NODShiLtJ_T0003321.1 MGP_NODShiLtJ_G0003054.1 mouse_genomes_project 11 133211545 133235135 + Gm11775 antisense antisense MGP_NODShiLtJ_T0032045.1 MGP_NODShiLtJ_G0018965.1 mouse_genomes_project 11 109576569 109576722 - MGP_NODShiLtJ_P0032045 Gm14190 protein_coding protein_coding MGP_NODShiLtJ_T0009565.1 MGP_NODShiLtJ_G0007698.1 mouse_genomes_project 11 21043448 21043536 - Mir1933 miRNA miRNA MGP_NODShiLtJ_T0006114.1 MGP_NODShiLtJ_G0005102.1 mouse_genomes_project 11 18000040 18108368 - Gm12023 lincRNA lincRNA MGP_NODShiLtJ_T0032974.1 MGP_NODShiLtJ_G0019184.1 mouse_genomes_project 11 120132605 120213436 - MGP_NODShiLtJ_P0032974 Rgs9 protein_coding protein_coding MGP_NODShiLtJ_T0032975.1 MGP_NODShiLtJ_G0019184.1 mouse_genomes_project 11 120132611 120161935 - MGP_NODShiLtJ_P0032975 Rgs9 protein_coding protein_coding MGP_NODShiLtJ_T0032976.1 MGP_NODShiLtJ_G0019184.1 mouse_genomes_project 11 120142286 120213373 - MGP_NODShiLtJ_P0032976 Rgs9 protein_coding protein_coding MGP_NODShiLtJ_T0032977.1 MGP_NODShiLtJ_G0019184.1 mouse_genomes_project 11 120151320 120158749 - Rgs9 protein_coding processed_transcript MGP_NODShiLtJ_T0032978.1 MGP_NODShiLtJ_G0019184.1 mouse_genomes_project 11 120168382 120213413 - MGP_NODShiLtJ_P0032978 Rgs9 protein_coding protein_coding MGP_NODShiLtJ_T0017043.1 MGP_NODShiLtJ_G0015026.1 mouse_genomes_project 11 21072967 21082198 + processed_transcript processed_transcript MGP_NODShiLtJ_T0030458.1 MGP_NODShiLtJ_G0018558.1 mouse_genomes_project 11 82555868 82567904 - MGP_NODShiLtJ_P0030458 Serpinf1 protein_coding protein_coding MGP_NODShiLtJ_T0030459.1 MGP_NODShiLtJ_G0018558.1 mouse_genomes_project 11 82556163 82564094 - MGP_NODShiLtJ_P0030459 Serpinf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030460.1 MGP_NODShiLtJ_G0018558.1 mouse_genomes_project 11 82556320 82561828 - MGP_NODShiLtJ_P0030460 Serpinf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030461.1 MGP_NODShiLtJ_G0018558.1 mouse_genomes_project 11 82560011 82567789 - MGP_NODShiLtJ_P0030461 Serpinf1 protein_coding protein_coding MGP_NODShiLtJ_T0030462.1 MGP_NODShiLtJ_G0018558.1 mouse_genomes_project 11 82560070 82561293 - Serpinf1 protein_coding retained_intron MGP_NODShiLtJ_T0030463.1 MGP_NODShiLtJ_G0018558.1 mouse_genomes_project 11 82561018 82567758 - MGP_NODShiLtJ_P0030463 Serpinf1 protein_coding protein_coding MGP_NODShiLtJ_T0030464.1 MGP_NODShiLtJ_G0018558.1 mouse_genomes_project 11 82561567 82567755 - MGP_NODShiLtJ_P0030464 Serpinf1 protein_coding protein_coding MGP_NODShiLtJ_T0030465.1 MGP_NODShiLtJ_G0018558.1 mouse_genomes_project 11 82562413 82564395 - MGP_NODShiLtJ_P0030465 Serpinf1 protein_coding protein_coding MGP_NODShiLtJ_T0032050.1 MGP_NODShiLtJ_G0018970.1 mouse_genomes_project 11 109712360 109715834 - MGP_NODShiLtJ_P0032050 protein_coding protein_coding MGP_NODShiLtJ_T0029710.1 MGP_NODShiLtJ_G0018375.1 mouse_genomes_project 11 75692504 75694318 + MGP_NODShiLtJ_P0029710 Trappc1 protein_coding protein_coding MGP_NODShiLtJ_T0029711.1 MGP_NODShiLtJ_G0018375.1 mouse_genomes_project 11 75692587 75694318 + MGP_NODShiLtJ_P0029711 Trappc1 protein_coding protein_coding MGP_NODShiLtJ_T0029712.1 MGP_NODShiLtJ_G0018375.1 mouse_genomes_project 11 75692599 75694318 + MGP_NODShiLtJ_P0029712 Trappc1 protein_coding protein_coding MGP_NODShiLtJ_T0029713.1 MGP_NODShiLtJ_G0018375.1 mouse_genomes_project 11 75692681 75694318 + MGP_NODShiLtJ_P0029713 Trappc1 protein_coding protein_coding MGP_NODShiLtJ_T0029714.1 MGP_NODShiLtJ_G0018375.1 mouse_genomes_project 11 75692962 75693757 + Trappc1 protein_coding processed_transcript MGP_NODShiLtJ_T0032798.1 MGP_NODShiLtJ_G0019146.1 mouse_genomes_project 11 116693482 116771518 + MGP_NODShiLtJ_P0032798 Map3k3 protein_coding protein_coding MGP_NODShiLtJ_T0032799.1 MGP_NODShiLtJ_G0019146.1 mouse_genomes_project 11 116767282 116768449 + Map3k3 protein_coding processed_transcript MGP_NODShiLtJ_T0032800.1 MGP_NODShiLtJ_G0019146.1 mouse_genomes_project 11 116768134 116770211 + Map3k3 protein_coding processed_transcript MGP_NODShiLtJ_T0031437.1 MGP_NODShiLtJ_G0018797.1 mouse_genomes_project 11 103137937 103160721 - MGP_NODShiLtJ_P0031437 Gm20390 protein_coding protein_coding MGP_NODShiLtJ_T0033266.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127317420 127322391 - Mif4gd protein_coding processed_transcript MGP_NODShiLtJ_T0033267.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127317420 127322431 - Mif4gd protein_coding processed_transcript MGP_NODShiLtJ_T0033268.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127317420 127322473 - MGP_NODShiLtJ_P0033268 Mif4gd protein_coding protein_coding MGP_NODShiLtJ_T0033269.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127317420 127322007 - MGP_NODShiLtJ_P0033269 Mif4gd protein_coding protein_coding MGP_NODShiLtJ_T0033270.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127317651 127322382 - MGP_NODShiLtJ_P0033270 Mif4gd protein_coding protein_coding MGP_NODShiLtJ_T0033271.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127317709 127322334 - Mif4gd protein_coding processed_transcript MGP_NODShiLtJ_T0033272.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127317919 127322403 - Mif4gd protein_coding processed_transcript MGP_NODShiLtJ_T0033273.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127318014 127321630 - MGP_NODShiLtJ_P0033273 Mif4gd protein_coding protein_coding MGP_NODShiLtJ_T0033274.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127318679 127322408 - Mif4gd protein_coding processed_transcript MGP_NODShiLtJ_T0033275.1 MGP_NODShiLtJ_G0019253.1 mouse_genomes_project 11 127321605 127322424 - Mif4gd protein_coding processed_transcript MGP_NODShiLtJ_T0031653.1 MGP_NODShiLtJ_G0018853.1 mouse_genomes_project 11 105838592 105842078 + MGP_NODShiLtJ_P0031653 Hoxb7 protein_coding protein_coding MGP_NODShiLtJ_T0031654.1 MGP_NODShiLtJ_G0018853.1 mouse_genomes_project 11 105840682 105841409 + Hoxb7 protein_coding processed_transcript MGP_NODShiLtJ_T0034027.1 MGP_NODShiLtJ_G0019398.1 mouse_genomes_project 11 133402514 133421794 + MGP_NODShiLtJ_P0034027 Hexdc protein_coding protein_coding MGP_NODShiLtJ_T0034028.1 MGP_NODShiLtJ_G0019398.1 mouse_genomes_project 11 133402516 133421786 + MGP_NODShiLtJ_P0034028 Hexdc protein_coding protein_coding MGP_NODShiLtJ_T0034029.1 MGP_NODShiLtJ_G0019398.1 mouse_genomes_project 11 133402856 133419025 + Hexdc protein_coding processed_transcript MGP_NODShiLtJ_T0034030.1 MGP_NODShiLtJ_G0019398.1 mouse_genomes_project 11 133402882 133414453 + Hexdc protein_coding processed_transcript MGP_NODShiLtJ_T0034031.1 MGP_NODShiLtJ_G0019398.1 mouse_genomes_project 11 133407086 133421786 + MGP_NODShiLtJ_P0034031 Hexdc protein_coding protein_coding MGP_NODShiLtJ_T0034032.1 MGP_NODShiLtJ_G0019398.1 mouse_genomes_project 11 133411433 133420168 + MGP_NODShiLtJ_P0034032 Hexdc protein_coding protein_coding MGP_NODShiLtJ_T0006214.1 MGP_NODShiLtJ_G0005187.1 mouse_genomes_project 11 82567933 82568545 - Gm12336 lincRNA lincRNA MGP_NODShiLtJ_T0031529.1 MGP_NODShiLtJ_G0018816.1 mouse_genomes_project 11 103938315 103951980 - MGP_NODShiLtJ_P0031529 Xylt2 protein_coding protein_coding MGP_NODShiLtJ_T0031530.1 MGP_NODShiLtJ_G0018816.1 mouse_genomes_project 11 103939051 103951980 - MGP_NODShiLtJ_P0031530 Xylt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031531.1 MGP_NODShiLtJ_G0018816.1 mouse_genomes_project 11 103940691 103942657 - MGP_NODShiLtJ_P0031531 Xylt2 protein_coding protein_coding MGP_NODShiLtJ_T0031532.1 MGP_NODShiLtJ_G0018816.1 mouse_genomes_project 11 103941335 103942267 - Xylt2 protein_coding retained_intron MGP_NODShiLtJ_T0031533.1 MGP_NODShiLtJ_G0018816.1 mouse_genomes_project 11 103942991 103951872 - MGP_NODShiLtJ_P0031533 Xylt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031534.1 MGP_NODShiLtJ_G0018816.1 mouse_genomes_project 11 103950427 103951878 - Xylt2 protein_coding processed_transcript MGP_NODShiLtJ_T0099960.1 MGP_NODShiLtJ_G0038354.1 mouse_genomes_project 11 108814386 108814508 - Gm23451 snoRNA snoRNA MGP_NODShiLtJ_T0031633.1 MGP_NODShiLtJ_G0018845.1 mouse_genomes_project 11 105529321 105547048 + MGP_NODShiLtJ_P0031633 Snf8 protein_coding protein_coding MGP_NODShiLtJ_T0031634.1 MGP_NODShiLtJ_G0018845.1 mouse_genomes_project 11 105529392 105543355 + Snf8 protein_coding processed_transcript MGP_NODShiLtJ_T0031635.1 MGP_NODShiLtJ_G0018845.1 mouse_genomes_project 11 105529401 105547048 + MGP_NODShiLtJ_P0031635 Snf8 protein_coding protein_coding MGP_NODShiLtJ_T0031636.1 MGP_NODShiLtJ_G0018845.1 mouse_genomes_project 11 105544309 105547048 + Snf8 protein_coding processed_transcript MGP_NODShiLtJ_T0031637.1 MGP_NODShiLtJ_G0018845.1 mouse_genomes_project 11 105544443 105546937 + Snf8 protein_coding processed_transcript MGP_NODShiLtJ_T0012335.1 MGP_NODShiLtJ_G0010443.1 mouse_genomes_project 11 326825 327301 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012496.1 MGP_NODShiLtJ_G0010604.1 mouse_genomes_project 11 61407824 61408053 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031856.1 MGP_NODShiLtJ_G0018900.1 mouse_genomes_project 11 107795107 107865214 - MGP_NODShiLtJ_P0031856 Fbxl20 protein_coding protein_coding MGP_NODShiLtJ_T0031857.1 MGP_NODShiLtJ_G0018900.1 mouse_genomes_project 11 107803504 107865208 - Fbxl20 protein_coding retained_intron MGP_NODShiLtJ_T0031858.1 MGP_NODShiLtJ_G0018900.1 mouse_genomes_project 11 107807508 107812303 - MGP_NODShiLtJ_P0031858 Fbxl20 protein_coding protein_coding MGP_NODShiLtJ_T0031859.1 MGP_NODShiLtJ_G0018900.1 mouse_genomes_project 11 107810661 107866005 - MGP_NODShiLtJ_P0031859 Fbxl20 protein_coding protein_coding MGP_NODShiLtJ_T0031860.1 MGP_NODShiLtJ_G0018900.1 mouse_genomes_project 11 107813971 107844770 - Fbxl20 protein_coding processed_transcript MGP_NODShiLtJ_T0031861.1 MGP_NODShiLtJ_G0018900.1 mouse_genomes_project 11 107821748 107844770 - MGP_NODShiLtJ_P0031861 Fbxl20 protein_coding protein_coding MGP_NODShiLtJ_T0031862.1 MGP_NODShiLtJ_G0018900.1 mouse_genomes_project 11 107843789 107844754 - Fbxl20 protein_coding processed_transcript MGP_NODShiLtJ_T0003123.1 MGP_NODShiLtJ_G0002896.1 mouse_genomes_project 11 62863783 62892866 - 4933424L21Rik antisense antisense MGP_NODShiLtJ_T0098176.1 MGP_NODShiLtJ_G0036588.1 mouse_genomes_project 11 75720582 75720726 - Gm22442 scaRNA scaRNA MGP_NODShiLtJ_T0031039.1 MGP_NODShiLtJ_G0018697.1 mouse_genomes_project 11 91300800 91304153 + MGP_NODShiLtJ_P0031039 1700020L24Rik protein_coding protein_coding MGP_NODShiLtJ_T0031040.1 MGP_NODShiLtJ_G0018697.1 mouse_genomes_project 11 91303206 91303748 + MGP_NODShiLtJ_P0031040 1700020L24Rik protein_coding protein_coding MGP_NODShiLtJ_T0027747.1 MGP_NODShiLtJ_G0017877.1 mouse_genomes_project 11 3451654 3523528 + MGP_NODShiLtJ_P0027747 Ogdh protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027748.1 MGP_NODShiLtJ_G0017877.1 mouse_genomes_project 11 3451659 3524495 + MGP_NODShiLtJ_P0027748 Ogdh protein_coding protein_coding MGP_NODShiLtJ_T0027749.1 MGP_NODShiLtJ_G0017877.1 mouse_genomes_project 11 3451667 3457788 + Ogdh protein_coding retained_intron MGP_NODShiLtJ_T0027750.1 MGP_NODShiLtJ_G0017877.1 mouse_genomes_project 11 3451692 3524431 + MGP_NODShiLtJ_P0027750 Ogdh protein_coding protein_coding MGP_NODShiLtJ_T0027751.1 MGP_NODShiLtJ_G0017877.1 mouse_genomes_project 11 3451694 3524445 + MGP_NODShiLtJ_P0027751 Ogdh protein_coding protein_coding MGP_NODShiLtJ_T0027752.1 MGP_NODShiLtJ_G0017877.1 mouse_genomes_project 11 3452011 3477827 + MGP_NODShiLtJ_P0027752 Ogdh protein_coding protein_coding MGP_NODShiLtJ_T0027753.1 MGP_NODShiLtJ_G0017877.1 mouse_genomes_project 11 3452198 3477711 + MGP_NODShiLtJ_P0027753 Ogdh protein_coding protein_coding MGP_NODShiLtJ_T0027754.1 MGP_NODShiLtJ_G0017877.1 mouse_genomes_project 11 3452631 3524445 + MGP_NODShiLtJ_P0027754 Ogdh protein_coding protein_coding MGP_NODShiLtJ_T0012541.1 MGP_NODShiLtJ_G0010649.1 mouse_genomes_project 11 77659563 77660367 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017091.1 MGP_NODShiLtJ_G0015056.1 mouse_genomes_project 11 82752108 82757211 - 4931413K12Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0012666.1 MGP_NODShiLtJ_G0010774.1 mouse_genomes_project 11 130166868 130167336 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006256.1 MGP_NODShiLtJ_G0005215.1 mouse_genomes_project 11 105061454 105068628 + Gm11528 lincRNA lincRNA MGP_NODShiLtJ_T0032838.1 MGP_NODShiLtJ_G0019157.1 mouse_genomes_project 11 116934512 116937936 - MGP_NODShiLtJ_P0032838 Cd79b protein_coding protein_coding MGP_NODShiLtJ_T0032839.1 MGP_NODShiLtJ_G0019157.1 mouse_genomes_project 11 116934515 116937703 - MGP_NODShiLtJ_P0032839 Cd79b protein_coding protein_coding MGP_NODShiLtJ_T0029073.1 MGP_NODShiLtJ_G0018236.1 mouse_genomes_project 11 64421141 64430417 + MGP_NODShiLtJ_P0029073 Trim17 protein_coding protein_coding MGP_NODShiLtJ_T0029715.1 MGP_NODShiLtJ_G0018376.1 mouse_genomes_project 11 75694782 75701563 + MGP_NODShiLtJ_P0029715 Kcnab3 protein_coding protein_coding MGP_NODShiLtJ_T0029716.1 MGP_NODShiLtJ_G0018376.1 mouse_genomes_project 11 75696390 75701563 + Kcnab3 protein_coding retained_intron MGP_NODShiLtJ_T0029717.1 MGP_NODShiLtJ_G0018376.1 mouse_genomes_project 11 75698848 75700664 + Kcnab3 protein_coding retained_intron MGP_NODShiLtJ_T0098682.1 MGP_NODShiLtJ_G0037076.1 mouse_genomes_project 11 58258600 58258695 + Gm25930 snRNA snRNA MGP_NODShiLtJ_T0028250.1 MGP_NODShiLtJ_G0017988.1 mouse_genomes_project 11 33983540 34002939 + MGP_NODShiLtJ_P0028250 Hbq1b protein_coding protein_coding MGP_NODShiLtJ_T0009639.1 MGP_NODShiLtJ_G0007772.1 mouse_genomes_project 11 96013780 96013844 + Mir142 miRNA miRNA MGP_NODShiLtJ_T0012513.1 MGP_NODShiLtJ_G0010621.1 mouse_genomes_project 11 66446619 66450101 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017141.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 123998031 124052271 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017142.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 123998902 124006226 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017143.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 123998923 124003438 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017144.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124003240 124014473 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017145.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124004231 124006226 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017146.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124006102 124051837 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017147.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124006189 124052255 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017148.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124014542 124029136 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017149.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124014658 124052277 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017150.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124014733 124052255 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017151.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124022403 124029295 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017152.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124022514 124052278 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017153.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124022621 124052271 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017154.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124025451 124052256 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017155.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124025451 124052256 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017156.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124025453 124128993 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017157.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124029100 124052254 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0017158.1 MGP_NODShiLtJ_G0015088.1 mouse_genomes_project 11 124060920 124089906 - BC006965 processed_transcript processed_transcript MGP_NODShiLtJ_T0012360.1 MGP_NODShiLtJ_G0010468.1 mouse_genomes_project 11 6657973 6659593 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003204.1 MGP_NODShiLtJ_G0002962.1 mouse_genomes_project 11 96739441 96747135 + Gm15893 antisense antisense MGP_NODShiLtJ_T0029672.1 MGP_NODShiLtJ_G0018366.1 mouse_genomes_project 11 75441928 75445823 + MGP_NODShiLtJ_P0029672 Vamp2 protein_coding protein_coding MGP_NODShiLtJ_T0029673.1 MGP_NODShiLtJ_G0018366.1 mouse_genomes_project 11 75441948 75444129 + MGP_NODShiLtJ_P0029673 Vamp2 protein_coding protein_coding MGP_NODShiLtJ_T0029674.1 MGP_NODShiLtJ_G0018366.1 mouse_genomes_project 11 75441960 75443114 + Vamp2 protein_coding retained_intron MGP_NODShiLtJ_T0029675.1 MGP_NODShiLtJ_G0018366.1 mouse_genomes_project 11 75441981 75443489 + Vamp2 protein_coding processed_transcript MGP_NODShiLtJ_T0029676.1 MGP_NODShiLtJ_G0018366.1 mouse_genomes_project 11 75443044 75443615 + Vamp2 protein_coding retained_intron MGP_NODShiLtJ_T0003127.1 MGP_NODShiLtJ_G0002900.1 mouse_genomes_project 11 64354641 64356422 + Gm12257 antisense antisense MGP_NODShiLtJ_T0033094.1 MGP_NODShiLtJ_G0019212.1 mouse_genomes_project 11 126202769 126261347 + MGP_NODShiLtJ_P0033094 Ttyh2 protein_coding protein_coding MGP_NODShiLtJ_T0033095.1 MGP_NODShiLtJ_G0019212.1 mouse_genomes_project 11 126202854 126220030 + Ttyh2 protein_coding processed_transcript MGP_NODShiLtJ_T0098688.1 MGP_NODShiLtJ_G0037082.1 mouse_genomes_project 11 67667536 67667643 - Gm23721 snRNA snRNA MGP_NODShiLtJ_T0012427.1 MGP_NODShiLtJ_G0010535.1 mouse_genomes_project 11 32096873 32097369 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029530.1 MGP_NODShiLtJ_G0018336.1 mouse_genomes_project 11 73373858 73377421 + protein_coding retained_intron MGP_NODShiLtJ_T0029531.1 MGP_NODShiLtJ_G0018336.1 mouse_genomes_project 11 73373865 73389091 + MGP_NODShiLtJ_P0029531 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028320.1 MGP_NODShiLtJ_G0018014.1 mouse_genomes_project 11 37703603 37851387 - MGP_NODShiLtJ_P0028320 Wwc1 protein_coding protein_coding MGP_NODShiLtJ_T0028321.1 MGP_NODShiLtJ_G0018014.1 mouse_genomes_project 11 37717689 37719073 - Wwc1 protein_coding processed_transcript MGP_NODShiLtJ_T0028322.1 MGP_NODShiLtJ_G0018014.1 mouse_genomes_project 11 37734091 37740255 - Wwc1 protein_coding processed_transcript MGP_NODShiLtJ_T0012389.1 MGP_NODShiLtJ_G0010497.1 mouse_genomes_project 11 19879967 19880288 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031166.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93420191 93923727 + MGP_NODShiLtJ_P0031166 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031167.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93420191 93583486 + MGP_NODShiLtJ_P0031167 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031168.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93420209 93438188 + MGP_NODShiLtJ_P0031168 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031169.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93420236 93923018 + MGP_NODShiLtJ_P0031169 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031170.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93420236 93923018 + MGP_NODShiLtJ_P0031170 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031171.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93537984 93923726 + MGP_NODShiLtJ_P0031171 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031172.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93542573 93568843 + MGP_NODShiLtJ_P0031172 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031173.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93564417 93567764 + Bcas3 protein_coding processed_transcript MGP_NODShiLtJ_T0031174.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93582121 93923726 + MGP_NODShiLtJ_P0031174 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031175.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93582132 93923726 + MGP_NODShiLtJ_P0031175 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031176.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93658242 93690477 + Bcas3 protein_coding processed_transcript MGP_NODShiLtJ_T0031177.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93730065 93923723 + Bcas3 protein_coding processed_transcript MGP_NODShiLtJ_T0031178.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93898349 93923058 + MGP_NODShiLtJ_P0031178 Bcas3 protein_coding protein_coding MGP_NODShiLtJ_T0031179.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93919080 93923314 + Bcas3 protein_coding processed_transcript MGP_NODShiLtJ_T0031180.1 MGP_NODShiLtJ_G0018731.1 mouse_genomes_project 11 93919633 93922975 + Bcas3 protein_coding processed_transcript MGP_NODShiLtJ_T0017024.1 MGP_NODShiLtJ_G0015019.1 mouse_genomes_project 11 391385 392055 + Gm11947 processed_transcript processed_transcript MGP_NODShiLtJ_T0012454.1 MGP_NODShiLtJ_G0010562.1 mouse_genomes_project 11 47171620 47171910 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003136.1 MGP_NODShiLtJ_G0002906.1 mouse_genomes_project 11 65798991 65800112 + Gm12265 antisense antisense MGP_NODShiLtJ_T0098669.1 MGP_NODShiLtJ_G0037063.1 mouse_genomes_project 11 19757057 19757160 - Gm26253 snRNA snRNA MGP_NODShiLtJ_T0012463.1 MGP_NODShiLtJ_G0010571.1 mouse_genomes_project 11 52705826 52707098 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012643.1 MGP_NODShiLtJ_G0010751.1 mouse_genomes_project 11 118063214 118063565 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032212.1 MGP_NODShiLtJ_G0019027.1 mouse_genomes_project 11 110999293 111014579 - MGP_NODShiLtJ_P0032212 Ptrf protein_coding protein_coding MGP_NODShiLtJ_T0032213.1 MGP_NODShiLtJ_G0019027.1 mouse_genomes_project 11 111008098 111014243 - Ptrf protein_coding processed_transcript MGP_NODShiLtJ_T0030949.1 MGP_NODShiLtJ_G0018667.1 mouse_genomes_project 11 88541317 89654076 - MGP_NODShiLtJ_P0030949 Asic2 protein_coding protein_coding MGP_NODShiLtJ_T0030950.1 MGP_NODShiLtJ_G0018667.1 mouse_genomes_project 11 88541317 88820069 - MGP_NODShiLtJ_P0030950 Asic2 protein_coding protein_coding MGP_NODShiLtJ_T0031348.1 MGP_NODShiLtJ_G0018772.1 mouse_genomes_project 11 96564905 96572002 + MGP_NODShiLtJ_P0031348 Mrps23 protein_coding protein_coding MGP_NODShiLtJ_T0031349.1 MGP_NODShiLtJ_G0018772.1 mouse_genomes_project 11 96564928 96572002 + MGP_NODShiLtJ_P0031349 Mrps23 protein_coding protein_coding MGP_NODShiLtJ_T0031350.1 MGP_NODShiLtJ_G0018772.1 mouse_genomes_project 11 96564941 96571175 + MGP_NODShiLtJ_P0031350 Mrps23 protein_coding protein_coding MGP_NODShiLtJ_T0031351.1 MGP_NODShiLtJ_G0018772.1 mouse_genomes_project 11 96564941 96570714 + MGP_NODShiLtJ_P0031351 Mrps23 protein_coding protein_coding MGP_NODShiLtJ_T0031352.1 MGP_NODShiLtJ_G0018772.1 mouse_genomes_project 11 96564961 96571476 + MGP_NODShiLtJ_P0031352 Mrps23 protein_coding protein_coding MGP_NODShiLtJ_T0006172.1 MGP_NODShiLtJ_G0005153.1 mouse_genomes_project 11 55671059 55678522 + 9230009I02Rik lincRNA lincRNA MGP_NODShiLtJ_T0031608.1 MGP_NODShiLtJ_G0018838.1 mouse_genomes_project 11 105173049 105176174 + MGP_NODShiLtJ_P0031608 B130006D01Rik protein_coding protein_coding MGP_NODShiLtJ_T0011689.1 MGP_NODShiLtJ_G0009819.1 mouse_genomes_project 11 81230245 81231217 + MGP_NODShiLtJ_P0011689 Olfr404-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0028496.1 MGP_NODShiLtJ_G0018060.1 mouse_genomes_project 11 53023924 53036999 + MGP_NODShiLtJ_P0028496 protein_coding protein_coding MGP_NODShiLtJ_T0028497.1 MGP_NODShiLtJ_G0018060.1 mouse_genomes_project 11 53023930 53027877 + MGP_NODShiLtJ_P0028497 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028498.1 MGP_NODShiLtJ_G0018060.1 mouse_genomes_project 11 53024973 53031991 + MGP_NODShiLtJ_P0028498 protein_coding protein_coding MGP_NODShiLtJ_T0028499.1 MGP_NODShiLtJ_G0018060.1 mouse_genomes_project 11 53025263 53032048 + MGP_NODShiLtJ_P0028499 protein_coding protein_coding MGP_NODShiLtJ_T0028500.1 MGP_NODShiLtJ_G0018060.1 mouse_genomes_project 11 53025296 53038595 + MGP_NODShiLtJ_P0028500 protein_coding protein_coding MGP_NODShiLtJ_T0028501.1 MGP_NODShiLtJ_G0018060.1 mouse_genomes_project 11 53034345 53039617 + protein_coding retained_intron MGP_NODShiLtJ_T0030082.1 MGP_NODShiLtJ_G0018455.1 mouse_genomes_project 11 77203281 77206144 - MGP_NODShiLtJ_P0030082 Slc25a11 protein_coding protein_coding MGP_NODShiLtJ_T0030083.1 MGP_NODShiLtJ_G0018455.1 mouse_genomes_project 11 77203780 77204996 - Slc25a11 protein_coding retained_intron MGP_NODShiLtJ_T0030084.1 MGP_NODShiLtJ_G0018455.1 mouse_genomes_project 11 77204316 77206565 - MGP_NODShiLtJ_P0030084 Slc25a11 protein_coding protein_coding MGP_NODShiLtJ_T0030085.1 MGP_NODShiLtJ_G0018455.1 mouse_genomes_project 11 77204994 77206064 - Slc25a11 protein_coding retained_intron MGP_NODShiLtJ_T0030086.1 MGP_NODShiLtJ_G0018455.1 mouse_genomes_project 11 77205000 77205985 - MGP_NODShiLtJ_P0030086 Slc25a11 protein_coding protein_coding MGP_NODShiLtJ_T0003174.1 MGP_NODShiLtJ_G0002938.1 mouse_genomes_project 11 82157389 82160262 - Gm12333 antisense antisense MGP_NODShiLtJ_T0031339.1 MGP_NODShiLtJ_G0018770.1 mouse_genomes_project 11 96420859 96437317 + MGP_NODShiLtJ_P0031339 Vezf1 protein_coding protein_coding MGP_NODShiLtJ_T0031340.1 MGP_NODShiLtJ_G0018770.1 mouse_genomes_project 11 96426168 96437317 + MGP_NODShiLtJ_P0031340 Vezf1 protein_coding protein_coding MGP_NODShiLtJ_T0028760.1 MGP_NODShiLtJ_G0018132.1 mouse_genomes_project 11 56811124 56840703 + MGP_NODShiLtJ_P0028760 Ppp2ca protein_coding protein_coding MGP_NODShiLtJ_T0028761.1 MGP_NODShiLtJ_G0018132.1 mouse_genomes_project 11 56830668 56831618 + Ppp2ca protein_coding retained_intron MGP_NODShiLtJ_T0030136.1 MGP_NODShiLtJ_G0018465.1 mouse_genomes_project 11 77435282 77544152 + MGP_NODShiLtJ_P0030136 Rabep1 protein_coding protein_coding MGP_NODShiLtJ_T0030137.1 MGP_NODShiLtJ_G0018465.1 mouse_genomes_project 11 77435286 77542338 + Rabep1 protein_coding retained_intron MGP_NODShiLtJ_T0030138.1 MGP_NODShiLtJ_G0018465.1 mouse_genomes_project 11 77435296 77494626 + MGP_NODShiLtJ_P0030138 Rabep1 protein_coding protein_coding MGP_NODShiLtJ_T0030139.1 MGP_NODShiLtJ_G0018465.1 mouse_genomes_project 11 77435303 77542333 + MGP_NODShiLtJ_P0030139 Rabep1 protein_coding protein_coding MGP_NODShiLtJ_T0030140.1 MGP_NODShiLtJ_G0018465.1 mouse_genomes_project 11 77435429 77541975 + MGP_NODShiLtJ_P0030140 Rabep1 protein_coding protein_coding MGP_NODShiLtJ_T0030141.1 MGP_NODShiLtJ_G0018465.1 mouse_genomes_project 11 77435446 77541681 + MGP_NODShiLtJ_P0030141 Rabep1 protein_coding protein_coding MGP_NODShiLtJ_T0030142.1 MGP_NODShiLtJ_G0018465.1 mouse_genomes_project 11 77435479 77541519 + MGP_NODShiLtJ_P0030142 Rabep1 protein_coding protein_coding MGP_NODShiLtJ_T0030143.1 MGP_NODShiLtJ_G0018465.1 mouse_genomes_project 11 77435479 77541519 + MGP_NODShiLtJ_P0030143 Rabep1 protein_coding protein_coding MGP_NODShiLtJ_T0003151.1 MGP_NODShiLtJ_G0002920.1 mouse_genomes_project 11 68827261 68844038 - Cdrt4os1 antisense antisense MGP_NODShiLtJ_T0003152.1 MGP_NODShiLtJ_G0002920.1 mouse_genomes_project 11 68835900 68844044 - Cdrt4os1 antisense antisense MGP_NODShiLtJ_T0029060.1 MGP_NODShiLtJ_G0018228.1 mouse_genomes_project 11 64287593 64288936 + MGP_NODShiLtJ_P0029060 protein_coding protein_coding MGP_NODShiLtJ_T0017059.1 MGP_NODShiLtJ_G0015037.1 mouse_genomes_project 11 49716821 49767943 + processed_transcript processed_transcript MGP_NODShiLtJ_T0012574.1 MGP_NODShiLtJ_G0010682.1 mouse_genomes_project 11 90733609 90734476 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097887.1 MGP_NODShiLtJ_G0036299.1 mouse_genomes_project 11 9014018 9014148 + Gm23065 rRNA rRNA MGP_NODShiLtJ_T0027510.1 MGP_NODShiLtJ_G0017821.1 mouse_genomes_project 11 779686 789860 - MGP_NODShiLtJ_P0027510 4921536K21Rik protein_coding protein_coding MGP_NODShiLtJ_T0000829.1 MGP_NODShiLtJ_G0000759.1 mouse_genomes_project 11 92117070 92119386 + TEC TEC MGP_NODShiLtJ_T0028039.1 MGP_NODShiLtJ_G0017944.1 mouse_genomes_project 11 23618252 23627250 - MGP_NODShiLtJ_P0028039 Ahsa2 protein_coding protein_coding MGP_NODShiLtJ_T0028040.1 MGP_NODShiLtJ_G0017944.1 mouse_genomes_project 11 23619286 23622010 - Ahsa2 protein_coding processed_transcript MGP_NODShiLtJ_T0028041.1 MGP_NODShiLtJ_G0017944.1 mouse_genomes_project 11 23619452 23627566 - MGP_NODShiLtJ_P0028041 Ahsa2 protein_coding protein_coding MGP_NODShiLtJ_T0028042.1 MGP_NODShiLtJ_G0017944.1 mouse_genomes_project 11 23620024 23621128 - Ahsa2 protein_coding processed_transcript MGP_NODShiLtJ_T0028043.1 MGP_NODShiLtJ_G0017944.1 mouse_genomes_project 11 23620130 23620781 - Ahsa2 protein_coding processed_transcript MGP_NODShiLtJ_T0028044.1 MGP_NODShiLtJ_G0017944.1 mouse_genomes_project 11 23620812 23627617 - MGP_NODShiLtJ_P0028044 Ahsa2 protein_coding protein_coding MGP_NODShiLtJ_T0028045.1 MGP_NODShiLtJ_G0017944.1 mouse_genomes_project 11 23622865 23627607 - MGP_NODShiLtJ_P0028045 Ahsa2 protein_coding protein_coding MGP_NODShiLtJ_T0012446.1 MGP_NODShiLtJ_G0010554.1 mouse_genomes_project 11 43437854 43438515 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003108.1 MGP_NODShiLtJ_G0002883.1 mouse_genomes_project 11 56966702 56970545 + Gm12207 antisense antisense MGP_NODShiLtJ_T0030122.1 MGP_NODShiLtJ_G0018461.1 mouse_genomes_project 11 77247463 77260719 - MGP_NODShiLtJ_P0030122 Inca1 protein_coding protein_coding MGP_NODShiLtJ_T0030123.1 MGP_NODShiLtJ_G0018461.1 mouse_genomes_project 11 77247463 77260719 - MGP_NODShiLtJ_P0030123 Inca1 protein_coding protein_coding MGP_NODShiLtJ_T0030124.1 MGP_NODShiLtJ_G0018461.1 mouse_genomes_project 11 77247463 77260719 - MGP_NODShiLtJ_P0030124 Inca1 protein_coding protein_coding MGP_NODShiLtJ_T0030125.1 MGP_NODShiLtJ_G0018461.1 mouse_genomes_project 11 77247463 77260719 - MGP_NODShiLtJ_P0030125 Inca1 protein_coding protein_coding MGP_NODShiLtJ_T0030126.1 MGP_NODShiLtJ_G0018461.1 mouse_genomes_project 11 77247471 77260673 - MGP_NODShiLtJ_P0030126 Inca1 protein_coding protein_coding MGP_NODShiLtJ_T0003253.1 MGP_NODShiLtJ_G0003000.1 mouse_genomes_project 11 112612541 112614013 - Bloodlinc antisense antisense MGP_NODShiLtJ_T0029746.1 MGP_NODShiLtJ_G0018384.1 mouse_genomes_project 11 75948063 75954174 - MGP_NODShiLtJ_P0029746 Efnb3 protein_coding protein_coding MGP_NODShiLtJ_T0003149.1 MGP_NODShiLtJ_G0002918.1 mouse_genomes_project 11 68757655 68760165 - Tvp23bos antisense antisense MGP_NODShiLtJ_T0030918.1 MGP_NODShiLtJ_G0018661.1 mouse_genomes_project 11 87975649 87989302 + MGP_NODShiLtJ_P0030918 Zfp207 protein_coding protein_coding MGP_NODShiLtJ_T0030919.1 MGP_NODShiLtJ_G0018661.1 mouse_genomes_project 11 87975649 87998777 + MGP_NODShiLtJ_P0030919 Zfp207 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030920.1 MGP_NODShiLtJ_G0018661.1 mouse_genomes_project 11 87975673 87989305 + MGP_NODShiLtJ_P0030920 Zfp207 protein_coding protein_coding MGP_NODShiLtJ_T0030921.1 MGP_NODShiLtJ_G0018661.1 mouse_genomes_project 11 87975701 87987340 + MGP_NODShiLtJ_P0030921 Zfp207 protein_coding protein_coding MGP_NODShiLtJ_T0030922.1 MGP_NODShiLtJ_G0018661.1 mouse_genomes_project 11 87975767 87988623 + MGP_NODShiLtJ_P0030922 Zfp207 protein_coding protein_coding MGP_NODShiLtJ_T0030923.1 MGP_NODShiLtJ_G0018661.1 mouse_genomes_project 11 87978243 87984935 + MGP_NODShiLtJ_P0030923 Zfp207 protein_coding protein_coding MGP_NODShiLtJ_T0030924.1 MGP_NODShiLtJ_G0018661.1 mouse_genomes_project 11 87981517 87997865 + MGP_NODShiLtJ_P0030924 Zfp207 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030866.1 MGP_NODShiLtJ_G0018649.1 mouse_genomes_project 11 87030759 87034788 - MGP_NODShiLtJ_P0030866 Evi2a protein_coding protein_coding MGP_NODShiLtJ_T0030867.1 MGP_NODShiLtJ_G0018649.1 mouse_genomes_project 11 87030767 87034809 - MGP_NODShiLtJ_P0030867 Evi2a protein_coding protein_coding MGP_NODShiLtJ_T0030868.1 MGP_NODShiLtJ_G0018649.1 mouse_genomes_project 11 87031156 87031975 - MGP_NODShiLtJ_P0030868 Evi2a protein_coding protein_coding MGP_NODShiLtJ_T0030869.1 MGP_NODShiLtJ_G0018649.1 mouse_genomes_project 11 87031884 87032346 - MGP_NODShiLtJ_P0030869 Evi2a protein_coding protein_coding MGP_NODShiLtJ_T0030870.1 MGP_NODShiLtJ_G0018649.1 mouse_genomes_project 11 87032267 87034809 - Evi2a protein_coding processed_transcript MGP_NODShiLtJ_T0099896.1 MGP_NODShiLtJ_G0038290.1 mouse_genomes_project 11 676788 676887 + Gm24013 snoRNA snoRNA MGP_NODShiLtJ_T0027755.1 MGP_NODShiLtJ_G0017878.1 mouse_genomes_project 11 3562059 3579752 + MGP_NODShiLtJ_P0027755 Zmiz2 protein_coding protein_coding MGP_NODShiLtJ_T0027756.1 MGP_NODShiLtJ_G0017878.1 mouse_genomes_project 11 3562349 3579752 + MGP_NODShiLtJ_P0027756 Zmiz2 protein_coding protein_coding MGP_NODShiLtJ_T0027757.1 MGP_NODShiLtJ_G0017878.1 mouse_genomes_project 11 3562456 3579752 + MGP_NODShiLtJ_P0027757 Zmiz2 protein_coding protein_coding MGP_NODShiLtJ_T0027758.1 MGP_NODShiLtJ_G0017878.1 mouse_genomes_project 11 3568159 3579668 + MGP_NODShiLtJ_P0027758 Zmiz2 protein_coding protein_coding MGP_NODShiLtJ_T0027759.1 MGP_NODShiLtJ_G0017878.1 mouse_genomes_project 11 3568576 3579524 + MGP_NODShiLtJ_P0027759 Zmiz2 protein_coding protein_coding MGP_NODShiLtJ_T0027760.1 MGP_NODShiLtJ_G0017878.1 mouse_genomes_project 11 3569699 3570819 + Zmiz2 protein_coding retained_intron MGP_NODShiLtJ_T0028901.1 MGP_NODShiLtJ_G0018169.1 mouse_genomes_project 11 59396694 59508147 + MGP_NODShiLtJ_P0028901 Fnip1 protein_coding protein_coding MGP_NODShiLtJ_T0028902.1 MGP_NODShiLtJ_G0018169.1 mouse_genomes_project 11 59434641 59490533 + MGP_NODShiLtJ_P0028902 Fnip1 protein_coding protein_coding MGP_NODShiLtJ_T0033883.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132744740 132753380 - MGP_NODShiLtJ_P0033883 Pcyt2 protein_coding protein_coding MGP_NODShiLtJ_T0033884.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132745894 132753369 - MGP_NODShiLtJ_P0033884 Pcyt2 protein_coding protein_coding MGP_NODShiLtJ_T0033885.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132746115 132747553 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033886.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132746319 132747525 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033887.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132747071 132748518 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033888.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132747648 132753352 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033889.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132748039 132749139 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033890.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132748378 132749033 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033891.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132748420 132749969 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033892.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132748473 132753357 - Pcyt2 protein_coding processed_transcript MGP_NODShiLtJ_T0033893.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132750619 132753354 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033894.1 MGP_NODShiLtJ_G0019372.1 mouse_genomes_project 11 132750890 132753313 - Pcyt2 protein_coding retained_intron MGP_NODShiLtJ_T0033357.1 MGP_NODShiLtJ_G0019266.1 mouse_genomes_project 11 127753776 127758039 - MGP_NODShiLtJ_P0033357 Galk1 protein_coding protein_coding MGP_NODShiLtJ_T0028661.1 MGP_NODShiLtJ_G0018107.1 mouse_genomes_project 11 55425293 55441689 - MGP_NODShiLtJ_P0028661 Zfp454 protein_coding protein_coding MGP_NODShiLtJ_T0028662.1 MGP_NODShiLtJ_G0018107.1 mouse_genomes_project 11 55426731 55441841 - Zfp454 protein_coding processed_transcript MGP_NODShiLtJ_T0028663.1 MGP_NODShiLtJ_G0018107.1 mouse_genomes_project 11 55432087 55441841 - MGP_NODShiLtJ_P0028663 Zfp454 protein_coding protein_coding MGP_NODShiLtJ_T0028664.1 MGP_NODShiLtJ_G0018107.1 mouse_genomes_project 11 55432299 55441720 - Zfp454 protein_coding processed_transcript MGP_NODShiLtJ_T0029937.1 MGP_NODShiLtJ_G0018425.1 mouse_genomes_project 11 76469776 76480250 + MGP_NODShiLtJ_P0029937 Dvl2 protein_coding protein_coding MGP_NODShiLtJ_T0029938.1 MGP_NODShiLtJ_G0018425.1 mouse_genomes_project 11 76469798 76482440 + MGP_NODShiLtJ_P0029938 Dvl2 protein_coding protein_coding MGP_NODShiLtJ_T0029939.1 MGP_NODShiLtJ_G0018425.1 mouse_genomes_project 11 76470002 76477100 + Dvl2 protein_coding retained_intron MGP_NODShiLtJ_T0029940.1 MGP_NODShiLtJ_G0018425.1 mouse_genomes_project 11 76470016 76476152 + Dvl2 protein_coding retained_intron MGP_NODShiLtJ_T0029941.1 MGP_NODShiLtJ_G0018425.1 mouse_genomes_project 11 76474639 76477612 + Dvl2 protein_coding retained_intron MGP_NODShiLtJ_T0029942.1 MGP_NODShiLtJ_G0018425.1 mouse_genomes_project 11 76477118 76478208 + Dvl2 protein_coding retained_intron MGP_NODShiLtJ_T0032014.1 MGP_NODShiLtJ_G0018937.1 mouse_genomes_project 11 109164457 109171857 - MGP_NODShiLtJ_P0032014 Krt25 protein_coding protein_coding MGP_NODShiLtJ_T0031966.1 MGP_NODShiLtJ_G0018925.1 mouse_genomes_project 11 108606913 108627370 + MGP_NODShiLtJ_P0031966 Rapgefl1 protein_coding protein_coding MGP_NODShiLtJ_T0031967.1 MGP_NODShiLtJ_G0018925.1 mouse_genomes_project 11 108617943 108621025 + Rapgefl1 protein_coding retained_intron MGP_NODShiLtJ_T0031968.1 MGP_NODShiLtJ_G0018925.1 mouse_genomes_project 11 108624004 108626672 + Rapgefl1 protein_coding retained_intron MGP_NODShiLtJ_T0029784.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76073892 76079274 - Eif4a1 protein_coding retained_intron MGP_NODShiLtJ_T0029785.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76073892 76079274 - MGP_NODShiLtJ_P0029785 Eif4a1 protein_coding protein_coding MGP_NODShiLtJ_T0029786.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76073893 76079274 - Eif4a1 protein_coding retained_intron MGP_NODShiLtJ_T0029787.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76074178 76075194 - Eif4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0029788.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76074338 76075020 - Eif4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0029789.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76074409 76075246 - Eif4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0029790.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76075438 76079380 - MGP_NODShiLtJ_P0029790 Eif4a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029791.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76076111 76079273 - Eif4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0029792.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76076119 76077840 - Eif4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0029793.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76077089 76079272 - Eif4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0029794.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76077136 76078687 - Eif4a1 protein_coding processed_transcript MGP_NODShiLtJ_T0029795.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76077204 76078179 - Eif4a1 protein_coding retained_intron MGP_NODShiLtJ_T0029796.1 MGP_NODShiLtJ_G0018394.1 mouse_genomes_project 11 76077425 76078407 - Eif4a1 protein_coding retained_intron MGP_NODShiLtJ_T0027776.1 MGP_NODShiLtJ_G0017883.1 mouse_genomes_project 11 3757883 3813985 + MGP_NODShiLtJ_P0027776 Ccm2 protein_coding protein_coding MGP_NODShiLtJ_T0027777.1 MGP_NODShiLtJ_G0017883.1 mouse_genomes_project 11 3757906 3806951 + MGP_NODShiLtJ_P0027777 Ccm2 protein_coding protein_coding MGP_NODShiLtJ_T0027778.1 MGP_NODShiLtJ_G0017883.1 mouse_genomes_project 11 3770938 3813975 + MGP_NODShiLtJ_P0027778 Ccm2 protein_coding protein_coding MGP_NODShiLtJ_T0027779.1 MGP_NODShiLtJ_G0017883.1 mouse_genomes_project 11 3771880 3810604 + MGP_NODShiLtJ_P0027779 Ccm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027780.1 MGP_NODShiLtJ_G0017883.1 mouse_genomes_project 11 3771889 3773721 + Ccm2 protein_coding processed_transcript MGP_NODShiLtJ_T0027781.1 MGP_NODShiLtJ_G0017883.1 mouse_genomes_project 11 3771902 3810541 + MGP_NODShiLtJ_P0027781 Ccm2 protein_coding protein_coding MGP_NODShiLtJ_T0027782.1 MGP_NODShiLtJ_G0017883.1 mouse_genomes_project 11 3771998 3813983 + MGP_NODShiLtJ_P0027782 Ccm2 protein_coding protein_coding MGP_NODShiLtJ_T0027783.1 MGP_NODShiLtJ_G0017883.1 mouse_genomes_project 11 3810518 3811739 + Ccm2 protein_coding retained_intron MGP_NODShiLtJ_T0030318.1 MGP_NODShiLtJ_G0018505.1 mouse_genomes_project 11 79994066 80019850 + MGP_NODShiLtJ_P0030318 Shpk protein_coding protein_coding MGP_NODShiLtJ_T0030319.1 MGP_NODShiLtJ_G0018505.1 mouse_genomes_project 11 79994066 80019841 + MGP_NODShiLtJ_P0030319 Shpk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009674.1 MGP_NODShiLtJ_G0007807.1 mouse_genomes_project 11 127526662 127526725 + Mir5621 miRNA miRNA MGP_NODShiLtJ_T0099943.1 MGP_NODShiLtJ_G0038337.1 mouse_genomes_project 11 84335684 84335805 + Gm22772 snoRNA snoRNA MGP_NODShiLtJ_T0012590.1 MGP_NODShiLtJ_G0010698.1 mouse_genomes_project 11 96822331 96822861 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032043.1 MGP_NODShiLtJ_G0018963.1 mouse_genomes_project 11 109537745 109539586 - MGP_NODShiLtJ_P0032043 Gm11563 protein_coding protein_coding MGP_NODShiLtJ_T0032780.1 MGP_NODShiLtJ_G0019140.1 mouse_genomes_project 11 116523917 116530605 - MGP_NODShiLtJ_P0032780 Cyb561 protein_coding protein_coding MGP_NODShiLtJ_T0032781.1 MGP_NODShiLtJ_G0019140.1 mouse_genomes_project 11 116525307 116534348 - MGP_NODShiLtJ_P0032781 Cyb561 protein_coding protein_coding MGP_NODShiLtJ_T0032782.1 MGP_NODShiLtJ_G0019140.1 mouse_genomes_project 11 116525712 116526401 - Cyb561 protein_coding processed_transcript MGP_NODShiLtJ_T0032783.1 MGP_NODShiLtJ_G0019140.1 mouse_genomes_project 11 116526022 116544981 - MGP_NODShiLtJ_P0032783 Cyb561 protein_coding protein_coding MGP_NODShiLtJ_T0032784.1 MGP_NODShiLtJ_G0019140.1 mouse_genomes_project 11 116526433 116534638 - MGP_NODShiLtJ_P0032784 Cyb561 protein_coding protein_coding MGP_NODShiLtJ_T0032785.1 MGP_NODShiLtJ_G0019140.1 mouse_genomes_project 11 116526778 116534696 - MGP_NODShiLtJ_P0032785 Cyb561 protein_coding protein_coding MGP_NODShiLtJ_T0012346.1 MGP_NODShiLtJ_G0010454.1 mouse_genomes_project 11 2786599 2786876 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003306.1 MGP_NODShiLtJ_G0003043.1 mouse_genomes_project 11 131884273 131898595 - Rptoros antisense antisense MGP_NODShiLtJ_T0028715.1 MGP_NODShiLtJ_G0018121.1 mouse_genomes_project 11 56281081 56285028 + MGP_NODShiLtJ_P0028715 Nhp2 protein_coding protein_coding MGP_NODShiLtJ_T0028716.1 MGP_NODShiLtJ_G0018121.1 mouse_genomes_project 11 56281117 56284748 + Nhp2 protein_coding retained_intron MGP_NODShiLtJ_T0027861.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9814619 9913469 - MGP_NODShiLtJ_P0027861 Ddc protein_coding protein_coding MGP_NODShiLtJ_T0027862.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9814619 9913369 - MGP_NODShiLtJ_P0027862 Ddc protein_coding protein_coding MGP_NODShiLtJ_T0027863.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9814621 9824813 - Ddc protein_coding processed_transcript MGP_NODShiLtJ_T0027864.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9814621 9903980 - MGP_NODShiLtJ_P0027864 Ddc protein_coding protein_coding MGP_NODShiLtJ_T0027865.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9820215 9840466 - Ddc protein_coding processed_transcript MGP_NODShiLtJ_T0027866.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9849150 9872796 - Ddc protein_coding processed_transcript MGP_NODShiLtJ_T0027867.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9850649 9903941 - MGP_NODShiLtJ_P0027867 Ddc protein_coding protein_coding MGP_NODShiLtJ_T0027868.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9869721 9903973 - Ddc protein_coding processed_transcript MGP_NODShiLtJ_T0027869.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9882703 9891239 - Ddc protein_coding processed_transcript MGP_NODShiLtJ_T0027870.1 MGP_NODShiLtJ_G0017904.1 mouse_genomes_project 11 9884642 9903970 - Ddc protein_coding processed_transcript MGP_NODShiLtJ_T0030956.1 MGP_NODShiLtJ_G0018671.1 mouse_genomes_project 11 89730648 89732462 + MGP_NODShiLtJ_P0030956 Ccl7 protein_coding protein_coding MGP_NODShiLtJ_T0033454.1 MGP_NODShiLtJ_G0019285.1 mouse_genomes_project 11 128212805 128226746 - MGP_NODShiLtJ_P0033454 Qrich2 protein_coding protein_coding MGP_NODShiLtJ_T0033455.1 MGP_NODShiLtJ_G0019285.1 mouse_genomes_project 11 128212807 128227636 - MGP_NODShiLtJ_P0033455 Qrich2 protein_coding protein_coding MGP_NODShiLtJ_T0033456.1 MGP_NODShiLtJ_G0019285.1 mouse_genomes_project 11 128215982 128219369 - Qrich2 protein_coding retained_intron MGP_NODShiLtJ_T0003077.1 MGP_NODShiLtJ_G0002855.1 mouse_genomes_project 11 17305130 17310939 + Etaa1os antisense antisense MGP_NODShiLtJ_T0003078.1 MGP_NODShiLtJ_G0002855.1 mouse_genomes_project 11 17305164 17306312 + Etaa1os antisense antisense MGP_NODShiLtJ_T0032081.1 MGP_NODShiLtJ_G0018996.1 mouse_genomes_project 11 110116326 110121620 - MGP_NODShiLtJ_P0032081 Krt19 protein_coding protein_coding MGP_NODShiLtJ_T0032082.1 MGP_NODShiLtJ_G0018996.1 mouse_genomes_project 11 110116423 110119199 - Krt19 protein_coding processed_transcript MGP_NODShiLtJ_T0032083.1 MGP_NODShiLtJ_G0018996.1 mouse_genomes_project 11 110117636 110124169 - Krt19 protein_coding processed_transcript MGP_NODShiLtJ_T0012610.1 MGP_NODShiLtJ_G0010718.1 mouse_genomes_project 11 107427303 107427605 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028704.1 MGP_NODShiLtJ_G0018119.1 mouse_genomes_project 11 56244762 56264427 + MGP_NODShiLtJ_P0028704 Phykpl protein_coding protein_coding MGP_NODShiLtJ_T0028705.1 MGP_NODShiLtJ_G0018119.1 mouse_genomes_project 11 56244762 56263193 + MGP_NODShiLtJ_P0028705 Phykpl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028706.1 MGP_NODShiLtJ_G0018119.1 mouse_genomes_project 11 56244794 56261269 + MGP_NODShiLtJ_P0028706 Phykpl protein_coding protein_coding MGP_NODShiLtJ_T0028707.1 MGP_NODShiLtJ_G0018119.1 mouse_genomes_project 11 56244808 56256951 + Phykpl protein_coding retained_intron MGP_NODShiLtJ_T0028708.1 MGP_NODShiLtJ_G0018119.1 mouse_genomes_project 11 56244812 56247323 + Phykpl protein_coding retained_intron MGP_NODShiLtJ_T0028709.1 MGP_NODShiLtJ_G0018119.1 mouse_genomes_project 11 56244816 56253309 + Phykpl protein_coding retained_intron MGP_NODShiLtJ_T0028710.1 MGP_NODShiLtJ_G0018119.1 mouse_genomes_project 11 56251449 56253884 + Phykpl protein_coding retained_intron MGP_NODShiLtJ_T0028711.1 MGP_NODShiLtJ_G0018119.1 mouse_genomes_project 11 56259207 56261008 + Phykpl protein_coding retained_intron MGP_NODShiLtJ_T0032047.1 MGP_NODShiLtJ_G0018967.1 mouse_genomes_project 11 109663165 109664270 - MGP_NODShiLtJ_P0032047 Gm11595 protein_coding protein_coding MGP_NODShiLtJ_T0029048.1 MGP_NODShiLtJ_G0018219.1 mouse_genomes_project 11 64042234 64056804 + MGP_NODShiLtJ_P0029048 protein_coding protein_coding MGP_NODShiLtJ_T0006120.1 MGP_NODShiLtJ_G0005107.1 mouse_genomes_project 11 20496277 20496716 - Gm12037 lincRNA lincRNA MGP_NODShiLtJ_T0006221.1 MGP_NODShiLtJ_G0005194.1 mouse_genomes_project 11 87306594 87308871 - 9130204K15Rik lincRNA lincRNA MGP_NODShiLtJ_T0006222.1 MGP_NODShiLtJ_G0005194.1 mouse_genomes_project 11 87306661 87401422 - 9130204K15Rik lincRNA lincRNA MGP_NODShiLtJ_T0006223.1 MGP_NODShiLtJ_G0005194.1 mouse_genomes_project 11 87307124 87390350 - 9130204K15Rik lincRNA lincRNA MGP_NODShiLtJ_T0006224.1 MGP_NODShiLtJ_G0005194.1 mouse_genomes_project 11 87321981 87331992 - 9130204K15Rik lincRNA lincRNA MGP_NODShiLtJ_T0028656.1 MGP_NODShiLtJ_G0018105.1 mouse_genomes_project 11 55382591 55392370 - MGP_NODShiLtJ_P0028656 Zfp879 protein_coding protein_coding MGP_NODShiLtJ_T0029781.1 MGP_NODShiLtJ_G0018393.1 mouse_genomes_project 11 76071169 76073110 - MGP_NODShiLtJ_P0029781 Cd68 protein_coding protein_coding MGP_NODShiLtJ_T0029782.1 MGP_NODShiLtJ_G0018393.1 mouse_genomes_project 11 76071262 76073019 - Cd68 protein_coding processed_transcript MGP_NODShiLtJ_T0029783.1 MGP_NODShiLtJ_G0018393.1 mouse_genomes_project 11 76071327 76073019 - MGP_NODShiLtJ_P0029783 Cd68 protein_coding protein_coding MGP_NODShiLtJ_T0098670.1 MGP_NODShiLtJ_G0037064.1 mouse_genomes_project 11 22858959 22859063 + Gm24917 snRNA snRNA MGP_NODShiLtJ_T0017138.1 MGP_NODShiLtJ_G0015085.1 mouse_genomes_project 11 118173642 118182971 + Gm11714 processed_transcript processed_transcript MGP_NODShiLtJ_T0012518.1 MGP_NODShiLtJ_G0010626.1 mouse_genomes_project 11 68068039 68068346 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098256.1 MGP_NODShiLtJ_G0036667.1 mouse_genomes_project 11 77464969 77473097 + Gm19967 sense_intronic sense_intronic MGP_NODShiLtJ_T0030261.1 MGP_NODShiLtJ_G0018490.1 mouse_genomes_project 11 79231707 79239232 - Spns3 protein_coding processed_transcript MGP_NODShiLtJ_T0030262.1 MGP_NODShiLtJ_G0018490.1 mouse_genomes_project 11 79234943 79289460 - MGP_NODShiLtJ_P0030262 Spns3 protein_coding protein_coding MGP_NODShiLtJ_T0030263.1 MGP_NODShiLtJ_G0018490.1 mouse_genomes_project 11 79234948 79289255 - MGP_NODShiLtJ_P0030263 Spns3 protein_coding protein_coding MGP_NODShiLtJ_T0012624.1 MGP_NODShiLtJ_G0010732.1 mouse_genomes_project 11 112143514 112143913 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032175.1 MGP_NODShiLtJ_G0019019.1 mouse_genomes_project 11 110733655 110734381 + MGP_NODShiLtJ_P0032175 Hspb9 protein_coding protein_coding MGP_NODShiLtJ_T0032176.1 MGP_NODShiLtJ_G0019019.1 mouse_genomes_project 11 110733727 110734379 + MGP_NODShiLtJ_P0032176 Hspb9 protein_coding protein_coding MGP_NODShiLtJ_T0028946.1 MGP_NODShiLtJ_G0018178.1 mouse_genomes_project 11 60143817 60160124 + MGP_NODShiLtJ_P0028946 Gm2a protein_coding protein_coding MGP_NODShiLtJ_T0012668.1 MGP_NODShiLtJ_G0010776.1 mouse_genomes_project 11 132933015 132937239 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027575.1 MGP_NODShiLtJ_G0017839.1 mouse_genomes_project 11 1283780 1391128 - MGP_NODShiLtJ_P0027575 Hormad2 protein_coding protein_coding MGP_NODShiLtJ_T0027576.1 MGP_NODShiLtJ_G0017839.1 mouse_genomes_project 11 1283780 1391486 - MGP_NODShiLtJ_P0027576 Hormad2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027577.1 MGP_NODShiLtJ_G0017839.1 mouse_genomes_project 11 1284349 1391465 - MGP_NODShiLtJ_P0027577 Hormad2 protein_coding protein_coding MGP_NODShiLtJ_T0027578.1 MGP_NODShiLtJ_G0017839.1 mouse_genomes_project 11 1373022 1376217 - Hormad2 protein_coding processed_transcript MGP_NODShiLtJ_T0027579.1 MGP_NODShiLtJ_G0017839.1 mouse_genomes_project 11 1373202 1391488 - MGP_NODShiLtJ_P0027579 Hormad2 protein_coding protein_coding MGP_NODShiLtJ_T0027580.1 MGP_NODShiLtJ_G0017839.1 mouse_genomes_project 11 1376268 1384653 - Hormad2 protein_coding processed_transcript MGP_NODShiLtJ_T0030968.1 MGP_NODShiLtJ_G0018677.1 mouse_genomes_project 11 90462663 90512509 - MGP_NODShiLtJ_P0030968 Cct6b protein_coding protein_coding MGP_NODShiLtJ_T0030969.1 MGP_NODShiLtJ_G0018677.1 mouse_genomes_project 11 90462663 90512524 - MGP_NODShiLtJ_P0030969 Cct6b protein_coding protein_coding MGP_NODShiLtJ_T0029609.1 MGP_NODShiLtJ_G0018355.1 mouse_genomes_project 11 75229413 75236834 + MGP_NODShiLtJ_P0029609 Rnf222 protein_coding protein_coding MGP_NODShiLtJ_T0012544.1 MGP_NODShiLtJ_G0010652.1 mouse_genomes_project 11 80021386 80021605 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028800.1 MGP_NODShiLtJ_G0018144.1 mouse_genomes_project 11 58305638 58312366 + Gdf9 protein_coding processed_transcript MGP_NODShiLtJ_T0028801.1 MGP_NODShiLtJ_G0018144.1 mouse_genomes_project 11 58307455 58308391 + Gdf9 protein_coding processed_transcript MGP_NODShiLtJ_T0028802.1 MGP_NODShiLtJ_G0018144.1 mouse_genomes_project 11 58307909 58313370 + MGP_NODShiLtJ_P0028802 Gdf9 protein_coding protein_coding MGP_NODShiLtJ_T0031719.1 MGP_NODShiLtJ_G0018867.1 mouse_genomes_project 11 106524105 106530797 - Pnpo protein_coding processed_transcript MGP_NODShiLtJ_T0031720.1 MGP_NODShiLtJ_G0018867.1 mouse_genomes_project 11 106524107 106530886 - MGP_NODShiLtJ_P0031720 Pnpo protein_coding protein_coding MGP_NODShiLtJ_T0012540.1 MGP_NODShiLtJ_G0010648.1 mouse_genomes_project 11 77479889 77480399 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029118.1 MGP_NODShiLtJ_G0018249.1 mouse_genomes_project 11 64959933 64968378 + MGP_NODShiLtJ_P0029118 Jmjd4 protein_coding protein_coding MGP_NODShiLtJ_T0029119.1 MGP_NODShiLtJ_G0018249.1 mouse_genomes_project 11 64959933 64968472 + MGP_NODShiLtJ_P0029119 Jmjd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029120.1 MGP_NODShiLtJ_G0018249.1 mouse_genomes_project 11 64959933 64968378 + MGP_NODShiLtJ_P0029120 Jmjd4 protein_coding protein_coding MGP_NODShiLtJ_T0029121.1 MGP_NODShiLtJ_G0018249.1 mouse_genomes_project 11 64960009 64966011 + Jmjd4 protein_coding retained_intron MGP_NODShiLtJ_T0033781.1 MGP_NODShiLtJ_G0019348.1 mouse_genomes_project 11 132184468 132186246 + MGP_NODShiLtJ_P0033781 1810043H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0033782.1 MGP_NODShiLtJ_G0019348.1 mouse_genomes_project 11 132184484 132185904 + MGP_NODShiLtJ_P0033782 1810043H04Rik protein_coding protein_coding MGP_NODShiLtJ_T0033783.1 MGP_NODShiLtJ_G0019348.1 mouse_genomes_project 11 132184639 132185955 + 1810043H04Rik protein_coding retained_intron MGP_NODShiLtJ_T0012647.1 MGP_NODShiLtJ_G0010755.1 mouse_genomes_project 11 120059170 120060178 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032826.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116886921 116891542 - MGP_NODShiLtJ_P0032826 Smarcd2 protein_coding protein_coding MGP_NODShiLtJ_T0032827.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116886921 116896716 - MGP_NODShiLtJ_P0032827 Smarcd2 protein_coding protein_coding MGP_NODShiLtJ_T0032828.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116887456 116889405 - Smarcd2 protein_coding retained_intron MGP_NODShiLtJ_T0032829.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116887541 116888679 - Smarcd2 protein_coding retained_intron MGP_NODShiLtJ_T0032830.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116887761 116889489 - MGP_NODShiLtJ_P0032830 Smarcd2 protein_coding protein_coding MGP_NODShiLtJ_T0032831.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116888475 116889814 - Smarcd2 protein_coding retained_intron MGP_NODShiLtJ_T0032832.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116889054 116896709 - Smarcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0032833.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116889481 116891226 - Smarcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0032834.1 MGP_NODShiLtJ_G0019154.1 mouse_genomes_project 11 116890633 116891271 - Smarcd2 protein_coding retained_intron MGP_NODShiLtJ_T0097888.1 MGP_NODShiLtJ_G0036300.1 mouse_genomes_project 11 23069659 23069759 - Gm23740 rRNA rRNA MGP_NODShiLtJ_T0003096.1 MGP_NODShiLtJ_G0002871.1 mouse_genomes_project 11 46945037 47004725 - Gm12147 antisense antisense MGP_NODShiLtJ_T0003319.1 MGP_NODShiLtJ_G0003052.1 mouse_genomes_project 11 132995001 132998217 + Gm11773 antisense antisense MGP_NODShiLtJ_T0009576.1 MGP_NODShiLtJ_G0007709.1 mouse_genomes_project 11 40196835 40196920 - Gm25693 miRNA miRNA MGP_NODShiLtJ_T0028510.1 MGP_NODShiLtJ_G0018066.1 mouse_genomes_project 11 53358784 53483668 + MGP_NODShiLtJ_P0028510 Olfr56 protein_coding protein_coding MGP_NODShiLtJ_T0028511.1 MGP_NODShiLtJ_G0018066.1 mouse_genomes_project 11 53358784 53483668 + MGP_NODShiLtJ_P0028511 Olfr56 protein_coding protein_coding MGP_NODShiLtJ_T0028512.1 MGP_NODShiLtJ_G0018066.1 mouse_genomes_project 11 53358784 53483668 + MGP_NODShiLtJ_P0028512 Olfr56 protein_coding protein_coding MGP_NODShiLtJ_T0028517.1 MGP_NODShiLtJ_G0018066.1 mouse_genomes_project 11 53424657 53472050 + Olfr56 protein_coding retained_intron MGP_NODShiLtJ_T0028519.1 MGP_NODShiLtJ_G0018066.1 mouse_genomes_project 11 53424675 53483601 + MGP_NODShiLtJ_P0028519 Olfr56 protein_coding protein_coding MGP_NODShiLtJ_T0028522.1 MGP_NODShiLtJ_G0018066.1 mouse_genomes_project 11 53458877 53483600 + MGP_NODShiLtJ_P0028522 Olfr56 protein_coding protein_coding MGP_NODShiLtJ_T0033710.1 MGP_NODShiLtJ_G0019336.1 mouse_genomes_project 11 131345484 131385893 + MGP_NODShiLtJ_P0033710 Card14 protein_coding protein_coding MGP_NODShiLtJ_T0033711.1 MGP_NODShiLtJ_G0019336.1 mouse_genomes_project 11 131353246 131385893 + MGP_NODShiLtJ_P0033711 Card14 protein_coding protein_coding MGP_NODShiLtJ_T0033712.1 MGP_NODShiLtJ_G0019336.1 mouse_genomes_project 11 131362321 131385705 + Card14 protein_coding processed_transcript MGP_NODShiLtJ_T0033713.1 MGP_NODShiLtJ_G0019336.1 mouse_genomes_project 11 131364615 131385892 + Card14 protein_coding processed_transcript MGP_NODShiLtJ_T0098726.1 MGP_NODShiLtJ_G0037120.1 mouse_genomes_project 11 111519981 111520162 - Gm25475 snRNA snRNA MGP_NODShiLtJ_T0003155.1 MGP_NODShiLtJ_G0002923.1 mouse_genomes_project 11 70024846 70028622 + 2810001G20Rik antisense antisense MGP_NODShiLtJ_T0003156.1 MGP_NODShiLtJ_G0002923.1 mouse_genomes_project 11 70024944 70028622 + 2810001G20Rik antisense antisense MGP_NODShiLtJ_T0033070.1 MGP_NODShiLtJ_G0019206.1 mouse_genomes_project 11 125098138 125122608 - MGP_NODShiLtJ_P0033070 Fam104a protein_coding protein_coding MGP_NODShiLtJ_T0032874.1 MGP_NODShiLtJ_G0019165.1 mouse_genomes_project 11 117442916 117456634 - MGP_NODShiLtJ_P0032874 Polg2 protein_coding protein_coding MGP_NODShiLtJ_T0032875.1 MGP_NODShiLtJ_G0019165.1 mouse_genomes_project 11 117442916 117456656 - MGP_NODShiLtJ_P0032875 Polg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032876.1 MGP_NODShiLtJ_G0019165.1 mouse_genomes_project 11 117443396 117456592 - MGP_NODShiLtJ_P0032876 Polg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032877.1 MGP_NODShiLtJ_G0019165.1 mouse_genomes_project 11 117445707 117456592 - MGP_NODShiLtJ_P0032877 Polg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032878.1 MGP_NODShiLtJ_G0019165.1 mouse_genomes_project 11 117448256 117449465 - Polg2 protein_coding retained_intron MGP_NODShiLtJ_T0032879.1 MGP_NODShiLtJ_G0019165.1 mouse_genomes_project 11 117451129 117456621 - MGP_NODShiLtJ_P0032879 Polg2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030688.1 MGP_NODShiLtJ_G0018605.1 mouse_genomes_project 11 85296819 85312692 - MGP_NODShiLtJ_P0030688 Pipox protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030689.1 MGP_NODShiLtJ_G0018605.1 mouse_genomes_project 11 85297265 85298892 - Pipox protein_coding retained_intron MGP_NODShiLtJ_T0030690.1 MGP_NODShiLtJ_G0018605.1 mouse_genomes_project 11 85298824 85300750 - Pipox protein_coding processed_transcript MGP_NODShiLtJ_T0101545.1 MGP_NODShiLtJ_G0039715.1 mouse_genomes_project 11 63376411 63385408 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012646.1 MGP_NODShiLtJ_G0010754.1 mouse_genomes_project 11 119896990 119898121 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017131.1 MGP_NODShiLtJ_G0015079.1 mouse_genomes_project 11 110404190 110404935 + Gm12348 processed_transcript processed_transcript MGP_NODShiLtJ_T0028569.1 MGP_NODShiLtJ_G0018088.1 mouse_genomes_project 11 54144761 54189586 - MGP_NODShiLtJ_P0028569 Cnot6 protein_coding protein_coding MGP_NODShiLtJ_T0028570.1 MGP_NODShiLtJ_G0018088.1 mouse_genomes_project 11 54148050 54178752 - Cnot6 protein_coding processed_transcript MGP_NODShiLtJ_T0028571.1 MGP_NODShiLtJ_G0018088.1 mouse_genomes_project 11 54148065 54189573 - MGP_NODShiLtJ_P0028571 Cnot6 protein_coding protein_coding MGP_NODShiLtJ_T0028572.1 MGP_NODShiLtJ_G0018088.1 mouse_genomes_project 11 54150736 54154686 - Cnot6 protein_coding processed_transcript MGP_NODShiLtJ_T0028573.1 MGP_NODShiLtJ_G0018088.1 mouse_genomes_project 11 54155437 54157010 - Cnot6 protein_coding processed_transcript MGP_NODShiLtJ_T0034060.1 MGP_NODShiLtJ_G0019406.1 mouse_genomes_project 11 133655496 133829688 + MGP_NODShiLtJ_P0034060 Tbcd protein_coding protein_coding MGP_NODShiLtJ_T0034061.1 MGP_NODShiLtJ_G0019406.1 mouse_genomes_project 11 133697668 133706487 + MGP_NODShiLtJ_P0034061 Tbcd protein_coding protein_coding MGP_NODShiLtJ_T0034062.1 MGP_NODShiLtJ_G0019406.1 mouse_genomes_project 11 133709471 133787194 + MGP_NODShiLtJ_P0034062 Tbcd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0034064.1 MGP_NODShiLtJ_G0019406.1 mouse_genomes_project 11 133755143 133801557 + Tbcd protein_coding processed_transcript MGP_NODShiLtJ_T0034065.1 MGP_NODShiLtJ_G0019406.1 mouse_genomes_project 11 133761053 133801534 + Tbcd protein_coding retained_intron MGP_NODShiLtJ_T0034066.1 MGP_NODShiLtJ_G0019406.1 mouse_genomes_project 11 133809466 133829687 + Tbcd protein_coding retained_intron MGP_NODShiLtJ_T0034067.1 MGP_NODShiLtJ_G0019406.1 mouse_genomes_project 11 133812769 133829687 + Tbcd protein_coding processed_transcript MGP_NODShiLtJ_T0034068.1 MGP_NODShiLtJ_G0019406.1 mouse_genomes_project 11 133812855 133829687 + Tbcd protein_coding processed_transcript MGP_NODShiLtJ_T0027440.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 127648 128829 + Patz1 protein_coding processed_transcript MGP_NODShiLtJ_T0027441.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 127941 148315 + Patz1 protein_coding processed_transcript MGP_NODShiLtJ_T0027442.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 127976 133689 + Patz1 protein_coding processed_transcript MGP_NODShiLtJ_T0027443.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 128055 148315 + MGP_NODShiLtJ_P0027443 Patz1 protein_coding protein_coding MGP_NODShiLtJ_T0027444.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 128636 148315 + MGP_NODShiLtJ_P0027444 Patz1 protein_coding protein_coding MGP_NODShiLtJ_T0027445.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 128636 134661 + MGP_NODShiLtJ_P0027445 Patz1 protein_coding protein_coding MGP_NODShiLtJ_T0027446.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 129039 148315 + MGP_NODShiLtJ_P0027446 Patz1 protein_coding protein_coding MGP_NODShiLtJ_T0027447.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 129057 148315 + MGP_NODShiLtJ_P0027447 Patz1 protein_coding protein_coding MGP_NODShiLtJ_T0027448.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 130059 147374 + Patz1 protein_coding processed_transcript MGP_NODShiLtJ_T0027449.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 130795 133268 + Patz1 protein_coding processed_transcript MGP_NODShiLtJ_T0027450.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 131468 133495 + Patz1 protein_coding processed_transcript MGP_NODShiLtJ_T0027451.1 MGP_NODShiLtJ_G0017811.1 mouse_genomes_project 11 137515 146899 + MGP_NODShiLtJ_P0027451 Patz1 protein_coding protein_coding MGP_NODShiLtJ_T0033276.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127323676 127341524 - MGP_NODShiLtJ_P0033276 Slc25a19 protein_coding protein_coding MGP_NODShiLtJ_T0033277.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127324949 127335983 - MGP_NODShiLtJ_P0033277 Slc25a19 protein_coding protein_coding MGP_NODShiLtJ_T0033278.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127326047 127327392 - Slc25a19 protein_coding processed_transcript MGP_NODShiLtJ_T0033279.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127327148 127341289 - Slc25a19 protein_coding processed_transcript MGP_NODShiLtJ_T0033280.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127336164 127341288 - Slc25a19 protein_coding processed_transcript MGP_NODShiLtJ_T0033281.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127336569 127341294 - Slc25a19 protein_coding processed_transcript MGP_NODShiLtJ_T0033282.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127337034 127341463 - Slc25a19 protein_coding processed_transcript MGP_NODShiLtJ_T0033283.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127337356 127341294 - MGP_NODShiLtJ_P0033283 Slc25a19 protein_coding protein_coding MGP_NODShiLtJ_T0033284.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127337377 127341142 - MGP_NODShiLtJ_P0033284 Slc25a19 protein_coding protein_coding MGP_NODShiLtJ_T0033285.1 MGP_NODShiLtJ_G0019254.1 mouse_genomes_project 11 127337432 127341312 - MGP_NODShiLtJ_P0033285 Slc25a19 protein_coding protein_coding MGP_NODShiLtJ_T0027802.1 MGP_NODShiLtJ_G0017887.1 mouse_genomes_project 11 3884638 3903514 + MGP_NODShiLtJ_P0027802 Ramp3 protein_coding protein_coding MGP_NODShiLtJ_T0027803.1 MGP_NODShiLtJ_G0017887.1 mouse_genomes_project 11 3884682 3903511 + Ramp3 protein_coding processed_transcript MGP_NODShiLtJ_T0006227.1 MGP_NODShiLtJ_G0005196.1 mouse_genomes_project 11 89671008 89674372 + Gm11419 lincRNA lincRNA MGP_NODShiLtJ_T0027713.1 MGP_NODShiLtJ_G0017869.1 mouse_genomes_project 11 3038252 3053881 - MGP_NODShiLtJ_P0027713 Gck protein_coding protein_coding MGP_NODShiLtJ_T0027714.1 MGP_NODShiLtJ_G0017869.1 mouse_genomes_project 11 3038252 3053881 - MGP_NODShiLtJ_P0027714 Gck protein_coding protein_coding MGP_NODShiLtJ_T0027715.1 MGP_NODShiLtJ_G0017869.1 mouse_genomes_project 11 3038255 3104463 - MGP_NODShiLtJ_P0027715 Gck protein_coding protein_coding MGP_NODShiLtJ_T0027716.1 MGP_NODShiLtJ_G0017869.1 mouse_genomes_project 11 3039008 3039527 - MGP_NODShiLtJ_P0027716 Gck protein_coding protein_coding MGP_NODShiLtJ_T0029517.1 MGP_NODShiLtJ_G0018333.1 mouse_genomes_project 11 73224120 73239306 - MGP_NODShiLtJ_P0029517 Adprm protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029518.1 MGP_NODShiLtJ_G0018333.1 mouse_genomes_project 11 73224256 73239282 - MGP_NODShiLtJ_P0029518 Adprm protein_coding protein_coding MGP_NODShiLtJ_T0029519.1 MGP_NODShiLtJ_G0018333.1 mouse_genomes_project 11 73224484 73226743 - Adprm protein_coding processed_transcript MGP_NODShiLtJ_T0029520.1 MGP_NODShiLtJ_G0018333.1 mouse_genomes_project 11 73227911 73239297 - Adprm protein_coding processed_transcript MGP_NODShiLtJ_T0029521.1 MGP_NODShiLtJ_G0018333.1 mouse_genomes_project 11 73227952 73239303 - Adprm protein_coding processed_transcript MGP_NODShiLtJ_T0029522.1 MGP_NODShiLtJ_G0018333.1 mouse_genomes_project 11 73228097 73239301 - Adprm protein_coding processed_transcript MGP_NODShiLtJ_T0028392.1 MGP_NODShiLtJ_G0018029.1 mouse_genomes_project 11 47240777 47322468 + MGP_NODShiLtJ_P0028392 Ccnjl protein_coding protein_coding MGP_NODShiLtJ_T0028393.1 MGP_NODShiLtJ_G0018029.1 mouse_genomes_project 11 47241239 47271468 + Ccnjl protein_coding processed_transcript MGP_NODShiLtJ_T0032064.1 MGP_NODShiLtJ_G0018984.1 mouse_genomes_project 11 109937937 109938966 - MGP_NODShiLtJ_P0032064 Krtap29-1 protein_coding protein_coding MGP_NODShiLtJ_T0099968.1 MGP_NODShiLtJ_G0038362.1 mouse_genomes_project 11 128463873 128463948 + Snord1b snoRNA snoRNA MGP_NODShiLtJ_T0012649.1 MGP_NODShiLtJ_G0010757.1 mouse_genomes_project 11 122800758 122801248 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098702.1 MGP_NODShiLtJ_G0037096.1 mouse_genomes_project 11 87143883 87143986 - Gm25867 snRNA snRNA MGP_NODShiLtJ_T0030496.1 MGP_NODShiLtJ_G0018566.1 mouse_genomes_project 11 82750531 82794206 + MGP_NODShiLtJ_P0030496 Pitpna protein_coding protein_coding MGP_NODShiLtJ_T0030497.1 MGP_NODShiLtJ_G0018566.1 mouse_genomes_project 11 82750542 82794180 + MGP_NODShiLtJ_P0030497 Pitpna protein_coding protein_coding MGP_NODShiLtJ_T0030498.1 MGP_NODShiLtJ_G0018566.1 mouse_genomes_project 11 82750553 82792132 + MGP_NODShiLtJ_P0030498 Pitpna protein_coding protein_coding MGP_NODShiLtJ_T0030499.1 MGP_NODShiLtJ_G0018566.1 mouse_genomes_project 11 82750593 82760988 + Pitpna protein_coding retained_intron MGP_NODShiLtJ_T0030500.1 MGP_NODShiLtJ_G0018566.1 mouse_genomes_project 11 82750593 82791835 + MGP_NODShiLtJ_P0030500 Pitpna protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030501.1 MGP_NODShiLtJ_G0018566.1 mouse_genomes_project 11 82785208 82791708 + Pitpna protein_coding processed_transcript MGP_NODShiLtJ_T0098715.1 MGP_NODShiLtJ_G0037109.1 mouse_genomes_project 11 97328418 97328525 + Gm23507 snRNA snRNA MGP_NODShiLtJ_T0006169.1 MGP_NODShiLtJ_G0005150.1 mouse_genomes_project 11 50600980 50602073 - lincRNA lincRNA MGP_NODShiLtJ_T0030557.1 MGP_NODShiLtJ_G0018578.1 mouse_genomes_project 11 83429038 83436128 - MGP_NODShiLtJ_P0030557 Gemin4 protein_coding protein_coding MGP_NODShiLtJ_T0030558.1 MGP_NODShiLtJ_G0018578.1 mouse_genomes_project 11 83435542 83435981 - MGP_NODShiLtJ_P0030558 Gemin4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0012636.1 MGP_NODShiLtJ_G0010744.1 mouse_genomes_project 11 115501171 115501860 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030277.1 MGP_NODShiLtJ_G0018494.1 mouse_genomes_project 11 79570337 79628463 + Zzef1 protein_coding retained_intron MGP_NODShiLtJ_T0030278.1 MGP_NODShiLtJ_G0018494.1 mouse_genomes_project 11 79570337 79704989 + MGP_NODShiLtJ_P0030278 Zzef1 protein_coding protein_coding MGP_NODShiLtJ_T0030279.1 MGP_NODShiLtJ_G0018494.1 mouse_genomes_project 11 79570365 79704987 + MGP_NODShiLtJ_P0030279 Zzef1 protein_coding protein_coding MGP_NODShiLtJ_T0030280.1 MGP_NODShiLtJ_G0018494.1 mouse_genomes_project 11 79570408 79704977 + MGP_NODShiLtJ_P0030280 Zzef1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030281.1 MGP_NODShiLtJ_G0018494.1 mouse_genomes_project 11 79620455 79627828 + Zzef1 protein_coding processed_transcript MGP_NODShiLtJ_T0030282.1 MGP_NODShiLtJ_G0018494.1 mouse_genomes_project 11 79690164 79703679 + Zzef1 protein_coding retained_intron MGP_NODShiLtJ_T0030283.1 MGP_NODShiLtJ_G0018494.1 mouse_genomes_project 11 79692811 79696754 + Zzef1 protein_coding retained_intron MGP_NODShiLtJ_T0030284.1 MGP_NODShiLtJ_G0018494.1 mouse_genomes_project 11 79698700 79704989 + Zzef1 protein_coding retained_intron MGP_NODShiLtJ_T0099925.1 MGP_NODShiLtJ_G0038319.1 mouse_genomes_project 11 60554554 60554694 + Gm22884 snoRNA snoRNA MGP_NODShiLtJ_T0017139.1 MGP_NODShiLtJ_G0015086.1 mouse_genomes_project 11 118297048 118322447 - A830035A12Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0006198.1 MGP_NODShiLtJ_G0005175.1 mouse_genomes_project 11 73302858 73311487 - 2310065F04Rik lincRNA lincRNA MGP_NODShiLtJ_T0006199.1 MGP_NODShiLtJ_G0005175.1 mouse_genomes_project 11 73304405 73307222 - 2310065F04Rik lincRNA lincRNA MGP_NODShiLtJ_T0099897.1 MGP_NODShiLtJ_G0038291.1 mouse_genomes_project 11 2052326 2052423 + Gm24958 snoRNA snoRNA MGP_NODShiLtJ_T0027912.1 MGP_NODShiLtJ_G0017915.1 mouse_genomes_project 11 16477037 16485408 - MGP_NODShiLtJ_P0027912 Pno1 protein_coding protein_coding MGP_NODShiLtJ_T0027913.1 MGP_NODShiLtJ_G0017915.1 mouse_genomes_project 11 16482628 16484894 - Pno1 protein_coding processed_transcript MGP_NODShiLtJ_T0012555.1 MGP_NODShiLtJ_G0010663.1 mouse_genomes_project 11 84449377 84450275 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030903.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87789549 87853870 + MGP_NODShiLtJ_P0030903 Rhot1 protein_coding protein_coding MGP_NODShiLtJ_T0030904.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87789585 87854965 + MGP_NODShiLtJ_P0030904 Rhot1 protein_coding protein_coding MGP_NODShiLtJ_T0030905.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87789614 87854544 + MGP_NODShiLtJ_P0030905 Rhot1 protein_coding protein_coding MGP_NODShiLtJ_T0030906.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87789643 87835112 + Rhot1 protein_coding retained_intron MGP_NODShiLtJ_T0030907.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87789649 87853825 + MGP_NODShiLtJ_P0030907 Rhot1 protein_coding protein_coding MGP_NODShiLtJ_T0030908.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87789677 87829478 + Rhot1 protein_coding retained_intron MGP_NODShiLtJ_T0030909.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87789817 87852917 + MGP_NODShiLtJ_P0030909 Rhot1 protein_coding protein_coding MGP_NODShiLtJ_T0030910.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87832748 87853796 + Rhot1 protein_coding processed_transcript MGP_NODShiLtJ_T0030911.1 MGP_NODShiLtJ_G0018658.1 mouse_genomes_project 11 87836785 87839044 + Rhot1 protein_coding retained_intron MGP_NODShiLtJ_T0032982.1 MGP_NODShiLtJ_G0019187.1 mouse_genomes_project 11 120362551 120377183 + MGP_NODShiLtJ_P0032982 Amz2 protein_coding protein_coding MGP_NODShiLtJ_T0032983.1 MGP_NODShiLtJ_G0019187.1 mouse_genomes_project 11 120362581 120394612 + MGP_NODShiLtJ_P0032983 Amz2 protein_coding protein_coding MGP_NODShiLtJ_T0032984.1 MGP_NODShiLtJ_G0019187.1 mouse_genomes_project 11 120362587 120368896 + Amz2 protein_coding retained_intron MGP_NODShiLtJ_T0032985.1 MGP_NODShiLtJ_G0019187.1 mouse_genomes_project 11 120362829 120374799 + MGP_NODShiLtJ_P0032985 Amz2 protein_coding protein_coding MGP_NODShiLtJ_T0032986.1 MGP_NODShiLtJ_G0019187.1 mouse_genomes_project 11 120370550 120372432 + Amz2 protein_coding processed_transcript MGP_NODShiLtJ_T0032987.1 MGP_NODShiLtJ_G0019187.1 mouse_genomes_project 11 120371586 120372537 + Amz2 protein_coding retained_intron MGP_NODShiLtJ_T0032988.1 MGP_NODShiLtJ_G0019187.1 mouse_genomes_project 11 120371799 120376286 + Amz2 protein_coding processed_transcript MGP_NODShiLtJ_T0032989.1 MGP_NODShiLtJ_G0019187.1 mouse_genomes_project 11 120380084 120395053 + Amz2 protein_coding processed_transcript MGP_NODShiLtJ_T0006142.1 MGP_NODShiLtJ_G0005125.1 mouse_genomes_project 11 30001635 30076728 + Gm12082 lincRNA lincRNA MGP_NODShiLtJ_T0029737.1 MGP_NODShiLtJ_G0018382.1 mouse_genomes_project 11 75776099 75794189 - MGP_NODShiLtJ_P0029737 Kdm6b protein_coding protein_coding MGP_NODShiLtJ_T0029738.1 MGP_NODShiLtJ_G0018382.1 mouse_genomes_project 11 75778700 75801729 - MGP_NODShiLtJ_P0029738 Kdm6b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029739.1 MGP_NODShiLtJ_G0018382.1 mouse_genomes_project 11 75782173 75783111 - Kdm6b protein_coding processed_transcript MGP_NODShiLtJ_T0009564.1 MGP_NODShiLtJ_G0007697.1 mouse_genomes_project 11 15881963 15882064 - Gm24714 miRNA miRNA MGP_NODShiLtJ_T0029072.1 MGP_NODShiLtJ_G0018235.1 mouse_genomes_project 11 64412259 64414406 + MGP_NODShiLtJ_P0029072 Hist3h2a protein_coding protein_coding MGP_NODShiLtJ_T0028347.1 MGP_NODShiLtJ_G0018019.1 mouse_genomes_project 11 43803323 43809922 - MGP_NODShiLtJ_P0028347 Ccng1 protein_coding protein_coding MGP_NODShiLtJ_T0028348.1 MGP_NODShiLtJ_G0018019.1 mouse_genomes_project 11 43803861 43808549 - Ccng1 protein_coding processed_transcript MGP_NODShiLtJ_T0003109.1 MGP_NODShiLtJ_G0002884.1 mouse_genomes_project 11 57009948 57020095 + A630014C17Rik antisense antisense MGP_NODShiLtJ_T0028405.1 MGP_NODShiLtJ_G0018034.1 mouse_genomes_project 11 47548046 47623301 - MGP_NODShiLtJ_P0028405 Adra1b protein_coding protein_coding MGP_NODShiLtJ_T0028406.1 MGP_NODShiLtJ_G0018034.1 mouse_genomes_project 11 47548046 47695828 - MGP_NODShiLtJ_P0028406 Adra1b protein_coding protein_coding MGP_NODShiLtJ_T0028407.1 MGP_NODShiLtJ_G0018034.1 mouse_genomes_project 11 47549463 47695828 - MGP_NODShiLtJ_P0028407 Adra1b protein_coding protein_coding MGP_NODShiLtJ_T0028657.1 MGP_NODShiLtJ_G0018106.1 mouse_genomes_project 11 55401591 55403345 + Grm6 protein_coding processed_transcript MGP_NODShiLtJ_T0028658.1 MGP_NODShiLtJ_G0018106.1 mouse_genomes_project 11 55401591 55418290 + MGP_NODShiLtJ_P0028658 Grm6 protein_coding protein_coding MGP_NODShiLtJ_T0028659.1 MGP_NODShiLtJ_G0018106.1 mouse_genomes_project 11 55401892 55418261 + MGP_NODShiLtJ_P0028659 Grm6 protein_coding protein_coding MGP_NODShiLtJ_T0028660.1 MGP_NODShiLtJ_G0018106.1 mouse_genomes_project 11 55408549 55418292 + Grm6 protein_coding processed_transcript MGP_NODShiLtJ_T0003176.1 MGP_NODShiLtJ_G0002940.1 mouse_genomes_project 11 84288485 84289445 - Gm12343 antisense antisense MGP_NODShiLtJ_T0028370.1 MGP_NODShiLtJ_G0018025.1 mouse_genomes_project 11 46818602 46828198 + Atp10b protein_coding processed_transcript MGP_NODShiLtJ_T0028371.1 MGP_NODShiLtJ_G0018025.1 mouse_genomes_project 11 46820313 46947532 + MGP_NODShiLtJ_P0028371 Atp10b protein_coding protein_coding MGP_NODShiLtJ_T0028372.1 MGP_NODShiLtJ_G0018025.1 mouse_genomes_project 11 46824586 46878663 + Atp10b protein_coding processed_transcript MGP_NODShiLtJ_T0028050.1 MGP_NODShiLtJ_G0017946.1 mouse_genomes_project 11 23696843 23778589 - MGP_NODShiLtJ_P0028050 0610010F05Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028051.1 MGP_NODShiLtJ_G0017946.1 mouse_genomes_project 11 23704836 23777223 - MGP_NODShiLtJ_P0028051 0610010F05Rik protein_coding protein_coding MGP_NODShiLtJ_T0028052.1 MGP_NODShiLtJ_G0017946.1 mouse_genomes_project 11 23708225 23729732 - MGP_NODShiLtJ_P0028052 0610010F05Rik protein_coding protein_coding MGP_NODShiLtJ_T0028053.1 MGP_NODShiLtJ_G0017946.1 mouse_genomes_project 11 23773915 23778671 - MGP_NODShiLtJ_P0028053 0610010F05Rik protein_coding protein_coding MGP_NODShiLtJ_T0000832.1 MGP_NODShiLtJ_G0000762.1 mouse_genomes_project 11 132714622 132715790 + TEC TEC MGP_NODShiLtJ_T0033243.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127271401 127293086 + MGP_NODShiLtJ_P0033243 Nup85 protein_coding protein_coding MGP_NODShiLtJ_T0033244.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127271492 127277924 + Nup85 protein_coding processed_transcript MGP_NODShiLtJ_T0033245.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127278147 127290944 + MGP_NODShiLtJ_P0033245 Nup85 protein_coding protein_coding MGP_NODShiLtJ_T0033246.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127285980 127291140 + MGP_NODShiLtJ_P0033246 Nup85 protein_coding protein_coding MGP_NODShiLtJ_T0033247.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127289604 127290520 + Nup85 protein_coding processed_transcript MGP_NODShiLtJ_T0033248.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127290196 127291135 + Nup85 protein_coding processed_transcript MGP_NODShiLtJ_T0033249.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127290741 127293007 + Nup85 protein_coding processed_transcript MGP_NODShiLtJ_T0033250.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127290848 127291379 + Nup85 protein_coding processed_transcript MGP_NODShiLtJ_T0033251.1 MGP_NODShiLtJ_G0019250.1 mouse_genomes_project 11 127292157 127292884 + Nup85 protein_coding processed_transcript MGP_NODShiLtJ_T0099901.1 MGP_NODShiLtJ_G0038295.1 mouse_genomes_project 11 3841100 3841233 - Gm24313 snoRNA snoRNA MGP_NODShiLtJ_T0011191.1 MGP_NODShiLtJ_G0009324.1 mouse_genomes_project 11 63264953 63265224 + Gm26025 misc_RNA misc_RNA MGP_NODShiLtJ_T0028968.1 MGP_NODShiLtJ_G0018186.1 mouse_genomes_project 11 60585841 60694666 - MGP_NODShiLtJ_P0028968 Glra1 protein_coding protein_coding MGP_NODShiLtJ_T0028969.1 MGP_NODShiLtJ_G0018186.1 mouse_genomes_project 11 60585841 60694201 - MGP_NODShiLtJ_P0028969 Glra1 protein_coding protein_coding MGP_NODShiLtJ_T0028970.1 MGP_NODShiLtJ_G0018186.1 mouse_genomes_project 11 60585841 60694289 - MGP_NODShiLtJ_P0028970 Glra1 protein_coding protein_coding MGP_NODShiLtJ_T0098706.1 MGP_NODShiLtJ_G0037100.1 mouse_genomes_project 11 91395098 91395205 + Gm23247 snRNA snRNA MGP_NODShiLtJ_T0006151.1 MGP_NODShiLtJ_G0005132.1 mouse_genomes_project 11 34666240 34692782 - Gm12111 lincRNA lincRNA MGP_NODShiLtJ_T0027498.1 MGP_NODShiLtJ_G0017819.1 mouse_genomes_project 11 533731 576083 + MGP_NODShiLtJ_P0027498 Morc2a protein_coding protein_coding MGP_NODShiLtJ_T0027499.1 MGP_NODShiLtJ_G0017819.1 mouse_genomes_project 11 533996 554060 + MGP_NODShiLtJ_P0027499 Morc2a protein_coding protein_coding MGP_NODShiLtJ_T0027500.1 MGP_NODShiLtJ_G0017819.1 mouse_genomes_project 11 534490 576190 + MGP_NODShiLtJ_P0027500 Morc2a protein_coding protein_coding MGP_NODShiLtJ_T0027501.1 MGP_NODShiLtJ_G0017819.1 mouse_genomes_project 11 564556 569621 + Morc2a protein_coding processed_transcript MGP_NODShiLtJ_T0027502.1 MGP_NODShiLtJ_G0017819.1 mouse_genomes_project 11 564916 565801 + Morc2a protein_coding processed_transcript MGP_NODShiLtJ_T0027503.1 MGP_NODShiLtJ_G0017819.1 mouse_genomes_project 11 565011 569403 + Morc2a protein_coding processed_transcript MGP_NODShiLtJ_T0029229.1 MGP_NODShiLtJ_G0018272.1 mouse_genomes_project 11 66310866 66328487 + MGP_NODShiLtJ_P0029229 Llgl1 protein_coding protein_coding MGP_NODShiLtJ_T0029230.1 MGP_NODShiLtJ_G0018272.1 mouse_genomes_project 11 66310988 66328487 + MGP_NODShiLtJ_P0029230 Llgl1 protein_coding protein_coding MGP_NODShiLtJ_T0029231.1 MGP_NODShiLtJ_G0018272.1 mouse_genomes_project 11 66318497 66320370 + Llgl1 protein_coding retained_intron MGP_NODShiLtJ_T0032079.1 MGP_NODShiLtJ_G0018995.1 mouse_genomes_project 11 110107271 110111442 - MGP_NODShiLtJ_P0032079 Krt15 protein_coding protein_coding MGP_NODShiLtJ_T0032080.1 MGP_NODShiLtJ_G0018995.1 mouse_genomes_project 11 110108548 110109912 - Krt15 protein_coding retained_intron MGP_NODShiLtJ_T0033684.1 MGP_NODShiLtJ_G0019332.1 mouse_genomes_project 11 131166732 131256189 - MGP_NODShiLtJ_P0033684 Tbc1d16 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033685.1 MGP_NODShiLtJ_G0019332.1 mouse_genomes_project 11 131166740 131256240 - MGP_NODShiLtJ_P0033685 Tbc1d16 protein_coding protein_coding MGP_NODShiLtJ_T0033686.1 MGP_NODShiLtJ_G0019332.1 mouse_genomes_project 11 131235454 131247280 - MGP_NODShiLtJ_P0033686 Tbc1d16 protein_coding protein_coding MGP_NODShiLtJ_T0011684.1 MGP_NODShiLtJ_G0009815.1 mouse_genomes_project 11 80251841 80252775 - MGP_NODShiLtJ_P0011684 Olfr379-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0006294.1 MGP_NODShiLtJ_G0005243.1 mouse_genomes_project 11 125694276 125713473 - Gm11690 lincRNA lincRNA MGP_NODShiLtJ_T0031163.1 MGP_NODShiLtJ_G0018729.1 mouse_genomes_project 11 93240650 93291197 - MGP_NODShiLtJ_P0031163 Appbp2 protein_coding protein_coding MGP_NODShiLtJ_T0012661.1 MGP_NODShiLtJ_G0010769.1 mouse_genomes_project 11 128147105 128147562 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028283.1 MGP_NODShiLtJ_G0018001.1 mouse_genomes_project 11 35440954 35470677 - MGP_NODShiLtJ_P0028283 Gabrp protein_coding protein_coding MGP_NODShiLtJ_T0028284.1 MGP_NODShiLtJ_G0018001.1 mouse_genomes_project 11 35462338 35470679 - MGP_NODShiLtJ_P0028284 Gabrp protein_coding protein_coding MGP_NODShiLtJ_T0027994.1 MGP_NODShiLtJ_G0017934.1 mouse_genomes_project 11 22456809 22464922 + MGP_NODShiLtJ_P0027994 Tmem17 protein_coding protein_coding MGP_NODShiLtJ_T0011196.1 MGP_NODShiLtJ_G0009329.1 mouse_genomes_project 11 91744434 91744742 + Gm23211 misc_RNA misc_RNA MGP_NODShiLtJ_T0028525.1 MGP_NODShiLtJ_G0018073.1 mouse_genomes_project 11 53509913 53510852 + MGP_NODShiLtJ_P0028525 Olfr1394 protein_coding protein_coding MGP_NODShiLtJ_T0030368.1 MGP_NODShiLtJ_G0018531.1 mouse_genomes_project 11 81009541 81010544 - MGP_NODShiLtJ_P0030368 Olfr399 protein_coding protein_coding MGP_NODShiLtJ_T0032087.1 MGP_NODShiLtJ_G0018999.1 mouse_genomes_project 11 110224137 110237684 - MGP_NODShiLtJ_P0032087 Krt16 protein_coding protein_coding MGP_NODShiLtJ_T0012596.1 MGP_NODShiLtJ_G0010704.1 mouse_genomes_project 11 101861223 101861799 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028964.1 MGP_NODShiLtJ_G0018184.1 mouse_genomes_project 11 60513415 60527964 - MGP_NODShiLtJ_P0028964 Atox1 protein_coding protein_coding MGP_NODShiLtJ_T0028965.1 MGP_NODShiLtJ_G0018184.1 mouse_genomes_project 11 60513418 60527922 - Atox1 protein_coding processed_transcript MGP_NODShiLtJ_T0028586.1 MGP_NODShiLtJ_G0018091.1 mouse_genomes_project 11 54395586 54468253 + MGP_NODShiLtJ_P0028586 Rasgef1c protein_coding protein_coding MGP_NODShiLtJ_T0028587.1 MGP_NODShiLtJ_G0018091.1 mouse_genomes_project 11 54395816 54469027 + MGP_NODShiLtJ_P0028587 Rasgef1c protein_coding protein_coding MGP_NODShiLtJ_T0028588.1 MGP_NODShiLtJ_G0018091.1 mouse_genomes_project 11 54451909 54463777 + Rasgef1c protein_coding processed_transcript MGP_NODShiLtJ_T0012621.1 MGP_NODShiLtJ_G0010729.1 mouse_genomes_project 11 111400226 111400865 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031685.1 MGP_NODShiLtJ_G0018862.1 mouse_genomes_project 11 106363438 106379165 + MGP_NODShiLtJ_P0031685 Cbx1 protein_coding protein_coding MGP_NODShiLtJ_T0031686.1 MGP_NODShiLtJ_G0018862.1 mouse_genomes_project 11 106363448 106383857 + MGP_NODShiLtJ_P0031686 Cbx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031687.1 MGP_NODShiLtJ_G0018862.1 mouse_genomes_project 11 106363470 106384349 + MGP_NODShiLtJ_P0031687 Cbx1 protein_coding protein_coding MGP_NODShiLtJ_T0031688.1 MGP_NODShiLtJ_G0018862.1 mouse_genomes_project 11 106363486 106376609 + Cbx1 protein_coding retained_intron MGP_NODShiLtJ_T0031689.1 MGP_NODShiLtJ_G0018862.1 mouse_genomes_project 11 106363560 106384249 + MGP_NODShiLtJ_P0031689 Cbx1 protein_coding protein_coding MGP_NODShiLtJ_T0098254.1 MGP_NODShiLtJ_G0036665.1 mouse_genomes_project 11 60554566 60554690 + Gm12238 sense_intronic sense_intronic MGP_NODShiLtJ_T0006279.1 MGP_NODShiLtJ_G0005232.1 mouse_genomes_project 11 120277478 120285176 + 1700096J18Rik lincRNA lincRNA MGP_NODShiLtJ_T0003154.1 MGP_NODShiLtJ_G0002922.1 mouse_genomes_project 11 69955722 69958331 + Gm12289 antisense antisense MGP_NODShiLtJ_T0003271.1 MGP_NODShiLtJ_G0003016.1 mouse_genomes_project 11 118070556 118077311 + Gm11716 antisense antisense MGP_NODShiLtJ_T0030264.1 MGP_NODShiLtJ_G0018491.1 mouse_genomes_project 11 79354779 79447661 + MGP_NODShiLtJ_P0030264 Ube2g1 protein_coding protein_coding MGP_NODShiLtJ_T0030265.1 MGP_NODShiLtJ_G0018491.1 mouse_genomes_project 11 79354779 79447661 + MGP_NODShiLtJ_P0030265 Ube2g1 protein_coding protein_coding MGP_NODShiLtJ_T0030266.1 MGP_NODShiLtJ_G0018491.1 mouse_genomes_project 11 79354815 79441320 + Ube2g1 protein_coding retained_intron MGP_NODShiLtJ_T0032070.1 MGP_NODShiLtJ_G0018990.1 mouse_genomes_project 11 110019435 110024296 - MGP_NODShiLtJ_P0032070 protein_coding protein_coding MGP_NODShiLtJ_T0030267.1 MGP_NODShiLtJ_G0018492.1 mouse_genomes_project 11 79451185 79486085 + Ankfy1 protein_coding retained_intron MGP_NODShiLtJ_T0030268.1 MGP_NODShiLtJ_G0018492.1 mouse_genomes_project 11 79451185 79539773 + MGP_NODShiLtJ_P0030268 Ankfy1 protein_coding protein_coding MGP_NODShiLtJ_T0030269.1 MGP_NODShiLtJ_G0018492.1 mouse_genomes_project 11 79451185 79539030 + MGP_NODShiLtJ_P0030269 Ankfy1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030270.1 MGP_NODShiLtJ_G0018492.1 mouse_genomes_project 11 79473272 79535397 + Ankfy1 protein_coding processed_transcript MGP_NODShiLtJ_T0030271.1 MGP_NODShiLtJ_G0018492.1 mouse_genomes_project 11 79521230 79522205 + Ankfy1 protein_coding retained_intron MGP_NODShiLtJ_T0030272.1 MGP_NODShiLtJ_G0018492.1 mouse_genomes_project 11 79525774 79535562 + Ankfy1 protein_coding retained_intron MGP_NODShiLtJ_T0027523.1 MGP_NODShiLtJ_G0017826.1 mouse_genomes_project 11 871656 887913 + MGP_NODShiLtJ_P0027523 Pes1 protein_coding protein_coding MGP_NODShiLtJ_T0027524.1 MGP_NODShiLtJ_G0017826.1 mouse_genomes_project 11 871690 878904 + Pes1 protein_coding processed_transcript MGP_NODShiLtJ_T0027525.1 MGP_NODShiLtJ_G0017826.1 mouse_genomes_project 11 871730 884953 + Pes1 protein_coding processed_transcript MGP_NODShiLtJ_T0030335.1 MGP_NODShiLtJ_G0018511.1 mouse_genomes_project 11 80174835 80180570 + MGP_NODShiLtJ_P0030335 Olfr376 protein_coding protein_coding MGP_NODShiLtJ_T0030336.1 MGP_NODShiLtJ_G0018511.1 mouse_genomes_project 11 80174835 80180570 + MGP_NODShiLtJ_P0030336 Olfr376 protein_coding protein_coding MGP_NODShiLtJ_T0030337.1 MGP_NODShiLtJ_G0018511.1 mouse_genomes_project 11 80174855 80181364 + MGP_NODShiLtJ_P0030337 Olfr376 protein_coding protein_coding MGP_NODShiLtJ_T0012626.1 MGP_NODShiLtJ_G0010734.1 mouse_genomes_project 11 112747705 112747876 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033418.1 MGP_NODShiLtJ_G0019276.1 mouse_genomes_project 11 127953471 127973440 + MGP_NODShiLtJ_P0033418 Ten1 protein_coding protein_coding MGP_NODShiLtJ_T0033419.1 MGP_NODShiLtJ_G0019276.1 mouse_genomes_project 11 127954879 127964051 + Ten1 protein_coding retained_intron MGP_NODShiLtJ_T0033420.1 MGP_NODShiLtJ_G0019276.1 mouse_genomes_project 11 127954940 127973370 + Ten1 protein_coding processed_transcript MGP_NODShiLtJ_T0033421.1 MGP_NODShiLtJ_G0019276.1 mouse_genomes_project 11 127969061 127973370 + Ten1 protein_coding processed_transcript MGP_NODShiLtJ_T0030348.1 MGP_NODShiLtJ_G0018519.1 mouse_genomes_project 11 80550201 80582157 + protein_coding processed_transcript MGP_NODShiLtJ_T0030349.1 MGP_NODShiLtJ_G0018519.1 mouse_genomes_project 11 80557220 80582089 + protein_coding processed_transcript MGP_NODShiLtJ_T0031405.1 MGP_NODShiLtJ_G0018791.1 mouse_genomes_project 11 99219417 99264413 - MGP_NODShiLtJ_P0031405 Tom1l1 protein_coding protein_coding MGP_NODShiLtJ_T0031406.1 MGP_NODShiLtJ_G0018791.1 mouse_genomes_project 11 99221642 99238935 - MGP_NODShiLtJ_P0031406 Tom1l1 protein_coding protein_coding MGP_NODShiLtJ_T0031407.1 MGP_NODShiLtJ_G0018791.1 mouse_genomes_project 11 99221643 99264407 - MGP_NODShiLtJ_P0031407 Tom1l1 protein_coding protein_coding MGP_NODShiLtJ_T0031408.1 MGP_NODShiLtJ_G0018791.1 mouse_genomes_project 11 99221643 99264385 - MGP_NODShiLtJ_P0031408 Tom1l1 protein_coding protein_coding MGP_NODShiLtJ_T0031409.1 MGP_NODShiLtJ_G0018791.1 mouse_genomes_project 11 99222181 99225884 - Tom1l1 protein_coding retained_intron MGP_NODShiLtJ_T0031410.1 MGP_NODShiLtJ_G0018791.1 mouse_genomes_project 11 99232991 99239248 - Tom1l1 protein_coding retained_intron MGP_NODShiLtJ_T0031411.1 MGP_NODShiLtJ_G0018791.1 mouse_genomes_project 11 99247317 99264394 - MGP_NODShiLtJ_P0031411 Tom1l1 protein_coding protein_coding MGP_NODShiLtJ_T0031412.1 MGP_NODShiLtJ_G0018791.1 mouse_genomes_project 11 99260090 99265174 - Tom1l1 protein_coding processed_transcript MGP_NODShiLtJ_T0030899.1 MGP_NODShiLtJ_G0018656.1 mouse_genomes_project 11 87728853 87754743 + MGP_NODShiLtJ_P0030899 Adap2 protein_coding protein_coding MGP_NODShiLtJ_T0030900.1 MGP_NODShiLtJ_G0018656.1 mouse_genomes_project 11 87728864 87740513 + MGP_NODShiLtJ_P0030900 Adap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006196.1 MGP_NODShiLtJ_G0005174.1 mouse_genomes_project 11 73135676 73143529 + lincRNA lincRNA MGP_NODShiLtJ_T0006197.1 MGP_NODShiLtJ_G0005174.1 mouse_genomes_project 11 73136917 73144032 + lincRNA lincRNA MGP_NODShiLtJ_T0030527.1 MGP_NODShiLtJ_G0018571.1 mouse_genomes_project 11 82944945 82973796 - MGP_NODShiLtJ_P0030527 Doc2b protein_coding protein_coding MGP_NODShiLtJ_T0009607.1 MGP_NODShiLtJ_G0007740.1 mouse_genomes_project 11 76338802 76338865 - Mir6924 miRNA miRNA MGP_NODShiLtJ_T0027485.1 MGP_NODShiLtJ_G0017817.1 mouse_genomes_project 11 371832 374497 + Selm protein_coding processed_transcript MGP_NODShiLtJ_T0027486.1 MGP_NODShiLtJ_G0017817.1 mouse_genomes_project 11 371850 374279 + Selm protein_coding processed_transcript MGP_NODShiLtJ_T0027487.1 MGP_NODShiLtJ_G0017817.1 mouse_genomes_project 11 372015 374500 + MGP_NODShiLtJ_P0027487 Selm protein_coding protein_coding MGP_NODShiLtJ_T0029099.1 MGP_NODShiLtJ_G0018242.1 mouse_genomes_project 11 64693429 64697910 + MGP_NODShiLtJ_P0029099 Mrpl55 protein_coding protein_coding MGP_NODShiLtJ_T0029100.1 MGP_NODShiLtJ_G0018242.1 mouse_genomes_project 11 64693432 64697871 + MGP_NODShiLtJ_P0029100 Mrpl55 protein_coding protein_coding MGP_NODShiLtJ_T0029101.1 MGP_NODShiLtJ_G0018242.1 mouse_genomes_project 11 64693435 64698117 + MGP_NODShiLtJ_P0029101 Mrpl55 protein_coding protein_coding MGP_NODShiLtJ_T0029102.1 MGP_NODShiLtJ_G0018242.1 mouse_genomes_project 11 64693448 64697985 + MGP_NODShiLtJ_P0029102 Mrpl55 protein_coding protein_coding MGP_NODShiLtJ_T0029103.1 MGP_NODShiLtJ_G0018242.1 mouse_genomes_project 11 64693481 64697871 + MGP_NODShiLtJ_P0029103 Mrpl55 protein_coding protein_coding MGP_NODShiLtJ_T0009609.1 MGP_NODShiLtJ_G0007742.1 mouse_genomes_project 11 76482181 76482270 + Mir324 miRNA miRNA MGP_NODShiLtJ_T0030109.1 MGP_NODShiLtJ_G0018459.1 mouse_genomes_project 11 77222864 77228507 - MGP_NODShiLtJ_P0030109 Spag7 protein_coding protein_coding MGP_NODShiLtJ_T0030110.1 MGP_NODShiLtJ_G0018459.1 mouse_genomes_project 11 77223094 77228309 - Spag7 protein_coding retained_intron MGP_NODShiLtJ_T0030111.1 MGP_NODShiLtJ_G0018459.1 mouse_genomes_project 11 77223431 77228370 - Spag7 protein_coding retained_intron MGP_NODShiLtJ_T0030112.1 MGP_NODShiLtJ_G0018459.1 mouse_genomes_project 11 77223490 77228381 - MGP_NODShiLtJ_P0030112 Spag7 protein_coding protein_coding MGP_NODShiLtJ_T0101552.1 MGP_NODShiLtJ_G0039722.1 mouse_genomes_project 11 80588168 80588727 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012631.1 MGP_NODShiLtJ_G0010739.1 mouse_genomes_project 11 114215057 114215386 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017082.1 MGP_NODShiLtJ_G0015051.1 mouse_genomes_project 11 75710370 75712696 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017083.1 MGP_NODShiLtJ_G0015051.1 mouse_genomes_project 11 75710718 75711428 + processed_transcript processed_transcript MGP_NODShiLtJ_T0030373.1 MGP_NODShiLtJ_G0018534.1 mouse_genomes_project 11 81136893 81142769 + MGP_NODShiLtJ_P0030373 Olfr402 protein_coding protein_coding MGP_NODShiLtJ_T0028687.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55876083 55887967 + MGP_NODShiLtJ_P0028687 Clk4 protein_coding protein_coding MGP_NODShiLtJ_T0028688.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55876083 55886360 + MGP_NODShiLtJ_P0028688 Clk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028689.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55877465 55896472 + MGP_NODShiLtJ_P0028689 Clk4 protein_coding protein_coding MGP_NODShiLtJ_T0028690.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55877501 55889600 + MGP_NODShiLtJ_P0028690 Clk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028691.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55877513 55881864 + Clk4 protein_coding retained_intron MGP_NODShiLtJ_T0028692.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55877515 55886705 + Clk4 protein_coding retained_intron MGP_NODShiLtJ_T0028693.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55877520 55887963 + MGP_NODShiLtJ_P0028693 Clk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028694.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55877525 55886401 + Clk4 protein_coding retained_intron MGP_NODShiLtJ_T0028695.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55877537 55896474 + MGP_NODShiLtJ_P0028695 Clk4 protein_coding protein_coding MGP_NODShiLtJ_T0028696.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55886339 55891542 + Clk4 protein_coding retained_intron MGP_NODShiLtJ_T0028697.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55887791 55896472 + MGP_NODShiLtJ_P0028697 Clk4 protein_coding protein_coding MGP_NODShiLtJ_T0028698.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55887952 55890578 + Clk4 protein_coding retained_intron MGP_NODShiLtJ_T0028699.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55889248 55889853 + Clk4 protein_coding retained_intron MGP_NODShiLtJ_T0028700.1 MGP_NODShiLtJ_G0018117.1 mouse_genomes_project 11 55894814 55895906 + Clk4 protein_coding retained_intron MGP_NODShiLtJ_T0003215.1 MGP_NODShiLtJ_G0002970.1 mouse_genomes_project 11 104784607 104793574 - Gm29477 antisense antisense MGP_NODShiLtJ_T0033137.1 MGP_NODShiLtJ_G0019223.1 mouse_genomes_project 11 126597155 126619883 - MGP_NODShiLtJ_P0033137 Cd300c2 protein_coding protein_coding MGP_NODShiLtJ_T0033138.1 MGP_NODShiLtJ_G0019223.1 mouse_genomes_project 11 126597156 126619883 - MGP_NODShiLtJ_P0033138 Cd300c2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032214.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111066604 111078555 + Atp6v0a1 protein_coding processed_transcript MGP_NODShiLtJ_T0032215.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111066604 111103172 + Atp6v0a1 protein_coding processed_transcript MGP_NODShiLtJ_T0032216.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111066604 111120763 + MGP_NODShiLtJ_P0032216 Atp6v0a1 protein_coding protein_coding MGP_NODShiLtJ_T0032217.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111066604 111122058 + MGP_NODShiLtJ_P0032217 Atp6v0a1 protein_coding protein_coding MGP_NODShiLtJ_T0032218.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111066639 111122052 + MGP_NODShiLtJ_P0032218 Atp6v0a1 protein_coding protein_coding MGP_NODShiLtJ_T0032219.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111067809 111077660 + MGP_NODShiLtJ_P0032219 Atp6v0a1 protein_coding protein_coding MGP_NODShiLtJ_T0032220.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111068973 111122058 + MGP_NODShiLtJ_P0032220 Atp6v0a1 protein_coding protein_coding MGP_NODShiLtJ_T0032221.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111078281 111084679 + Atp6v0a1 protein_coding processed_transcript MGP_NODShiLtJ_T0032222.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111098194 111107570 + Atp6v0a1 protein_coding processed_transcript MGP_NODShiLtJ_T0032223.1 MGP_NODShiLtJ_G0019028.1 mouse_genomes_project 11 111102163 111103175 + Atp6v0a1 protein_coding processed_transcript MGP_NODShiLtJ_T0030589.1 MGP_NODShiLtJ_G0018584.1 mouse_genomes_project 11 83907605 83908812 + MGP_NODShiLtJ_P0030589 Bhlha9 protein_coding protein_coding MGP_NODShiLtJ_T0031945.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108508982 108521761 + Thra protein_coding processed_transcript MGP_NODShiLtJ_T0031946.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108509145 108522020 + Thra protein_coding processed_transcript MGP_NODShiLtJ_T0031947.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108509248 108521824 + Thra protein_coding processed_transcript MGP_NODShiLtJ_T0031948.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108510155 108526124 + Thra protein_coding processed_transcript MGP_NODShiLtJ_T0031949.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108510155 108539134 + MGP_NODShiLtJ_P0031949 Thra protein_coding protein_coding MGP_NODShiLtJ_T0031950.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108510217 108535259 + MGP_NODShiLtJ_P0031950 Thra protein_coding protein_coding MGP_NODShiLtJ_T0031951.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108510502 108525424 + MGP_NODShiLtJ_P0031951 Thra protein_coding protein_coding MGP_NODShiLtJ_T0031952.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108512577 108522159 + Thra protein_coding processed_transcript MGP_NODShiLtJ_T0031953.1 MGP_NODShiLtJ_G0018921.1 mouse_genomes_project 11 108521967 108538531 + MGP_NODShiLtJ_P0031953 Thra protein_coding protein_coding MGP_NODShiLtJ_T0012457.1 MGP_NODShiLtJ_G0010565.1 mouse_genomes_project 11 48222745 48222905 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030359.1 MGP_NODShiLtJ_G0018526.1 mouse_genomes_project 11 80815926 80816865 - MGP_NODShiLtJ_P0030359 Olfr395 protein_coding protein_coding MGP_NODShiLtJ_T0009597.1 MGP_NODShiLtJ_G0007730.1 mouse_genomes_project 11 66342962 66343026 + Mir5100 miRNA miRNA MGP_NODShiLtJ_T0028395.1 MGP_NODShiLtJ_G0018031.1 mouse_genomes_project 11 47331629 47338100 - MGP_NODShiLtJ_P0028395 Fabp6 protein_coding protein_coding MGP_NODShiLtJ_T0033804.1 MGP_NODShiLtJ_G0019351.1 mouse_genomes_project 11 132455006 132456213 - protein_coding retained_intron MGP_NODShiLtJ_T0028029.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23346278 23620264 + MGP_NODShiLtJ_P0028029 protein_coding protein_coding MGP_NODShiLtJ_T0028030.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23346299 23619448 + MGP_NODShiLtJ_P0028030 protein_coding protein_coding MGP_NODShiLtJ_T0028031.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23393025 23574850 + MGP_NODShiLtJ_P0028031 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028032.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23393025 23574850 + MGP_NODShiLtJ_P0028032 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028033.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23521152 23527403 + protein_coding processed_transcript MGP_NODShiLtJ_T0028034.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23526805 23577081 + MGP_NODShiLtJ_P0028034 protein_coding protein_coding MGP_NODShiLtJ_T0028035.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23582398 23585353 + protein_coding processed_transcript MGP_NODShiLtJ_T0028036.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23582537 23585067 + protein_coding processed_transcript MGP_NODShiLtJ_T0028037.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23596080 23618072 + MGP_NODShiLtJ_P0028037 protein_coding protein_coding MGP_NODShiLtJ_T0028038.1 MGP_NODShiLtJ_G0017943.1 mouse_genomes_project 11 23616508 23617027 + protein_coding processed_transcript MGP_NODShiLtJ_T0009572.1 MGP_NODShiLtJ_G0007705.1 mouse_genomes_project 11 30006942 30007014 + Mir216a miRNA miRNA MGP_NODShiLtJ_T0031897.1 MGP_NODShiLtJ_G0018909.1 mouse_genomes_project 11 108147336 108173757 + MGP_NODShiLtJ_P0031897 Erbb2 protein_coding protein_coding MGP_NODShiLtJ_T0031898.1 MGP_NODShiLtJ_G0018909.1 mouse_genomes_project 11 108147359 108173118 + Erbb2 protein_coding processed_transcript MGP_NODShiLtJ_T0031899.1 MGP_NODShiLtJ_G0018909.1 mouse_genomes_project 11 108163115 108163608 + Erbb2 protein_coding processed_transcript MGP_NODShiLtJ_T0033129.1 MGP_NODShiLtJ_G0019219.1 mouse_genomes_project 11 126495394 126507040 - MGP_NODShiLtJ_P0033129 Cd300lb protein_coding protein_coding MGP_NODShiLtJ_T0033130.1 MGP_NODShiLtJ_G0019219.1 mouse_genomes_project 11 126495394 126507025 - MGP_NODShiLtJ_P0033130 Cd300lb protein_coding protein_coding MGP_NODShiLtJ_T0033131.1 MGP_NODShiLtJ_G0019219.1 mouse_genomes_project 11 126500956 126506941 - Cd300lb protein_coding processed_transcript MGP_NODShiLtJ_T0031920.1 MGP_NODShiLtJ_G0018916.1 mouse_genomes_project 11 108400621 108411167 + MGP_NODShiLtJ_P0031920 Gsdma2 protein_coding protein_coding MGP_NODShiLtJ_T0031921.1 MGP_NODShiLtJ_G0018916.1 mouse_genomes_project 11 108400625 108403275 + Gsdma2 protein_coding processed_transcript MGP_NODShiLtJ_T0031922.1 MGP_NODShiLtJ_G0018916.1 mouse_genomes_project 11 108400625 108411156 + MGP_NODShiLtJ_P0031922 Gsdma2 protein_coding protein_coding MGP_NODShiLtJ_T0031923.1 MGP_NODShiLtJ_G0018916.1 mouse_genomes_project 11 108400637 108402847 + Gsdma2 protein_coding processed_transcript MGP_NODShiLtJ_T0031924.1 MGP_NODShiLtJ_G0018916.1 mouse_genomes_project 11 108403810 108405212 + Gsdma2 protein_coding processed_transcript MGP_NODShiLtJ_T0031925.1 MGP_NODShiLtJ_G0018916.1 mouse_genomes_project 11 108404672 108408147 + Gsdma2 protein_coding processed_transcript MGP_NODShiLtJ_T0029005.1 MGP_NODShiLtJ_G0018198.1 mouse_genomes_project 11 63523879 63532664 + MGP_NODShiLtJ_P0029005 Igtp protein_coding protein_coding MGP_NODShiLtJ_T0029006.1 MGP_NODShiLtJ_G0018198.1 mouse_genomes_project 11 63523901 63532638 + MGP_NODShiLtJ_P0029006 Igtp protein_coding protein_coding MGP_NODShiLtJ_T0029007.1 MGP_NODShiLtJ_G0018198.1 mouse_genomes_project 11 63523903 63532648 + MGP_NODShiLtJ_P0029007 Igtp protein_coding protein_coding MGP_NODShiLtJ_T0017051.1 MGP_NODShiLtJ_G0015031.1 mouse_genomes_project 11 23689950 23690725 - Gm12060 processed_transcript processed_transcript MGP_NODShiLtJ_T0098727.1 MGP_NODShiLtJ_G0037121.1 mouse_genomes_project 11 111755777 111755968 + Gm26316 snRNA snRNA MGP_NODShiLtJ_T0028472.1 MGP_NODShiLtJ_G0018054.1 mouse_genomes_project 11 50667161 50689730 - MGP_NODShiLtJ_P0028472 Timd2 protein_coding protein_coding MGP_NODShiLtJ_T0028473.1 MGP_NODShiLtJ_G0018054.1 mouse_genomes_project 11 50668206 50718064 - MGP_NODShiLtJ_P0028473 Timd2 protein_coding protein_coding MGP_NODShiLtJ_T0028474.1 MGP_NODShiLtJ_G0018054.1 mouse_genomes_project 11 50668206 50703119 - MGP_NODShiLtJ_P0028474 Timd2 protein_coding protein_coding MGP_NODShiLtJ_T0028475.1 MGP_NODShiLtJ_G0018054.1 mouse_genomes_project 11 50668213 50718152 - MGP_NODShiLtJ_P0028475 Timd2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028476.1 MGP_NODShiLtJ_G0018054.1 mouse_genomes_project 11 50686392 50718066 - MGP_NODShiLtJ_P0028476 Timd2 protein_coding protein_coding MGP_NODShiLtJ_T0098690.1 MGP_NODShiLtJ_G0037084.1 mouse_genomes_project 11 75252367 75252470 + Gm22608 snRNA snRNA MGP_NODShiLtJ_T0012492.1 MGP_NODShiLtJ_G0010600.1 mouse_genomes_project 11 59972327 59972781 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101539.1 MGP_NODShiLtJ_G0039709.1 mouse_genomes_project 11 5423624 5425267 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003066.1 MGP_NODShiLtJ_G0002848.1 mouse_genomes_project 11 3656670 3671804 + Gm11973 antisense antisense MGP_NODShiLtJ_T0003067.1 MGP_NODShiLtJ_G0002848.1 mouse_genomes_project 11 3656710 3674218 + Gm11973 antisense antisense MGP_NODShiLtJ_T0003068.1 MGP_NODShiLtJ_G0002848.1 mouse_genomes_project 11 3656722 3674218 + Gm11973 antisense antisense MGP_NODShiLtJ_T0033514.1 MGP_NODShiLtJ_G0019296.1 mouse_genomes_project 11 128603837 128631056 - MGP_NODShiLtJ_P0033514 Mxra7 protein_coding protein_coding MGP_NODShiLtJ_T0033515.1 MGP_NODShiLtJ_G0019296.1 mouse_genomes_project 11 128608401 128631023 - MGP_NODShiLtJ_P0033515 Mxra7 protein_coding protein_coding MGP_NODShiLtJ_T0033516.1 MGP_NODShiLtJ_G0019296.1 mouse_genomes_project 11 128608593 128631013 - MGP_NODShiLtJ_P0033516 Mxra7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032609.1 MGP_NODShiLtJ_G0019102.1 mouse_genomes_project 11 113169938 113179679 - MGP_NODShiLtJ_P0032609 Gfap protein_coding protein_coding MGP_NODShiLtJ_T0032610.1 MGP_NODShiLtJ_G0019102.1 mouse_genomes_project 11 113172762 113179748 - MGP_NODShiLtJ_P0032610 Gfap protein_coding protein_coding MGP_NODShiLtJ_T0032611.1 MGP_NODShiLtJ_G0019102.1 mouse_genomes_project 11 113177034 113183460 - Gfap protein_coding processed_transcript MGP_NODShiLtJ_T0029736.1 MGP_NODShiLtJ_G0018381.1 mouse_genomes_project 11 75774111 75775826 - MGP_NODShiLtJ_P0029736 Tmem88 protein_coding protein_coding MGP_NODShiLtJ_T0012483.1 MGP_NODShiLtJ_G0010591.1 mouse_genomes_project 11 58540152 58540785 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031235.1 MGP_NODShiLtJ_G0018744.1 mouse_genomes_project 11 94938029 94983820 - MGP_NODShiLtJ_P0031235 Dhx40 protein_coding protein_coding MGP_NODShiLtJ_T0031236.1 MGP_NODShiLtJ_G0018744.1 mouse_genomes_project 11 94944824 94977183 - MGP_NODShiLtJ_P0031236 Dhx40 protein_coding protein_coding MGP_NODShiLtJ_T0031237.1 MGP_NODShiLtJ_G0018744.1 mouse_genomes_project 11 94953779 94958469 - Dhx40 protein_coding processed_transcript MGP_NODShiLtJ_T0031238.1 MGP_NODShiLtJ_G0018744.1 mouse_genomes_project 11 94975757 94983113 - Dhx40 protein_coding processed_transcript MGP_NODShiLtJ_T0012614.1 MGP_NODShiLtJ_G0010722.1 mouse_genomes_project 11 109154110 109155103 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012347.1 MGP_NODShiLtJ_G0010455.1 mouse_genomes_project 11 3335816 3336172 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028163.1 MGP_NODShiLtJ_G0017969.1 mouse_genomes_project 11 31555070 31726558 - MGP_NODShiLtJ_P0028163 Sptbn1 protein_coding protein_coding MGP_NODShiLtJ_T0028164.1 MGP_NODShiLtJ_G0017969.1 mouse_genomes_project 11 31555071 31558926 - Sptbn1 protein_coding retained_intron MGP_NODShiLtJ_T0028165.1 MGP_NODShiLtJ_G0017969.1 mouse_genomes_project 11 31555071 31675920 - MGP_NODShiLtJ_P0028165 Sptbn1 protein_coding protein_coding MGP_NODShiLtJ_T0028166.1 MGP_NODShiLtJ_G0017969.1 mouse_genomes_project 11 31557188 31561287 - Sptbn1 protein_coding retained_intron MGP_NODShiLtJ_T0028167.1 MGP_NODShiLtJ_G0017969.1 mouse_genomes_project 11 31562461 31654494 - MGP_NODShiLtJ_P0028167 Sptbn1 protein_coding protein_coding MGP_NODShiLtJ_T0028168.1 MGP_NODShiLtJ_G0017969.1 mouse_genomes_project 11 31565549 31567038 - Sptbn1 protein_coding retained_intron MGP_NODShiLtJ_T0028169.1 MGP_NODShiLtJ_G0017969.1 mouse_genomes_project 11 31565626 31725603 - MGP_NODShiLtJ_P0028169 Sptbn1 protein_coding protein_coding MGP_NODShiLtJ_T0028170.1 MGP_NODShiLtJ_G0017969.1 mouse_genomes_project 11 31672807 31726564 - Sptbn1 protein_coding retained_intron MGP_NODShiLtJ_T0099941.1 MGP_NODShiLtJ_G0038335.1 mouse_genomes_project 11 82021288 82021381 + Snord91a snoRNA snoRNA MGP_NODShiLtJ_T0101567.1 MGP_NODShiLtJ_G0039737.1 mouse_genomes_project 11 104226095 104226824 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0029258.1 MGP_NODShiLtJ_G0018278.1 mouse_genomes_project 11 66463863 66490264 + MGP_NODShiLtJ_P0029258 Dhrs7b protein_coding protein_coding MGP_NODShiLtJ_T0012411.1 MGP_NODShiLtJ_G0010519.1 mouse_genomes_project 11 27400061 27413191 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101039.1 MGP_NODShiLtJ_G0039413.1 mouse_genomes_project 11 3876231 3886372 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101040.1 MGP_NODShiLtJ_G0039413.1 mouse_genomes_project 11 3876457 3876923 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101041.1 MGP_NODShiLtJ_G0039413.1 mouse_genomes_project 11 3877223 3884844 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101042.1 MGP_NODShiLtJ_G0039413.1 mouse_genomes_project 11 3877496 3886349 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0031314.1 MGP_NODShiLtJ_G0018762.1 mouse_genomes_project 11 96064033 96085167 - MGP_NODShiLtJ_P0031314 Lpo protein_coding protein_coding MGP_NODShiLtJ_T0031315.1 MGP_NODShiLtJ_G0018762.1 mouse_genomes_project 11 96075334 96076273 - Lpo protein_coding retained_intron MGP_NODShiLtJ_T0031316.1 MGP_NODShiLtJ_G0018762.1 mouse_genomes_project 11 96076501 96087212 - MGP_NODShiLtJ_P0031316 Lpo protein_coding protein_coding MGP_NODShiLtJ_T0029059.1 MGP_NODShiLtJ_G0018227.1 mouse_genomes_project 11 64287576 64288931 + MGP_NODShiLtJ_P0029059 protein_coding protein_coding MGP_NODShiLtJ_T0027687.1 MGP_NODShiLtJ_G0017861.1 mouse_genomes_project 11 2815588 2819295 - MGP_NODShiLtJ_P0027687 Mrps24 protein_coding protein_coding MGP_NODShiLtJ_T0027688.1 MGP_NODShiLtJ_G0017861.1 mouse_genomes_project 11 2815934 2819275 - Mrps24 protein_coding retained_intron MGP_NODShiLtJ_T0027689.1 MGP_NODShiLtJ_G0017861.1 mouse_genomes_project 11 2816131 2828322 - Mrps24 protein_coding processed_transcript MGP_NODShiLtJ_T0027690.1 MGP_NODShiLtJ_G0017861.1 mouse_genomes_project 11 2816163 2819298 - Mrps24 protein_coding retained_intron MGP_NODShiLtJ_T0027691.1 MGP_NODShiLtJ_G0017861.1 mouse_genomes_project 11 2816268 2819250 - Mrps24 protein_coding retained_intron MGP_NODShiLtJ_T0030127.1 MGP_NODShiLtJ_G0018462.1 mouse_genomes_project 11 77261044 77293826 + MGP_NODShiLtJ_P0030127 Kif1c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030128.1 MGP_NODShiLtJ_G0018462.1 mouse_genomes_project 11 77261057 77293826 + MGP_NODShiLtJ_P0030128 Kif1c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030129.1 MGP_NODShiLtJ_G0018462.1 mouse_genomes_project 11 77261111 77267990 + MGP_NODShiLtJ_P0030129 Kif1c protein_coding protein_coding MGP_NODShiLtJ_T0030130.1 MGP_NODShiLtJ_G0018462.1 mouse_genomes_project 11 77261111 77298737 + MGP_NODShiLtJ_P0030130 Kif1c protein_coding protein_coding MGP_NODShiLtJ_T0030131.1 MGP_NODShiLtJ_G0018462.1 mouse_genomes_project 11 77261124 77297158 + MGP_NODShiLtJ_P0030131 Kif1c protein_coding protein_coding MGP_NODShiLtJ_T0030132.1 MGP_NODShiLtJ_G0018462.1 mouse_genomes_project 11 77261139 77297195 + MGP_NODShiLtJ_P0030132 Kif1c protein_coding protein_coding MGP_NODShiLtJ_T0030133.1 MGP_NODShiLtJ_G0018462.1 mouse_genomes_project 11 77261213 77298737 + MGP_NODShiLtJ_P0030133 Kif1c protein_coding protein_coding MGP_NODShiLtJ_T0032645.1 MGP_NODShiLtJ_G0019110.1 mouse_genomes_project 11 113420723 113427947 + MGP_NODShiLtJ_P0032645 Hexim2 protein_coding protein_coding MGP_NODShiLtJ_T0032646.1 MGP_NODShiLtJ_G0019110.1 mouse_genomes_project 11 113421444 113428640 + MGP_NODShiLtJ_P0032646 Hexim2 protein_coding protein_coding MGP_NODShiLtJ_T0032647.1 MGP_NODShiLtJ_G0019110.1 mouse_genomes_project 11 113421469 113428095 + MGP_NODShiLtJ_P0032647 Hexim2 protein_coding protein_coding MGP_NODShiLtJ_T0032648.1 MGP_NODShiLtJ_G0019110.1 mouse_genomes_project 11 113421475 113429325 + MGP_NODShiLtJ_P0032648 Hexim2 protein_coding protein_coding MGP_NODShiLtJ_T0032649.1 MGP_NODShiLtJ_G0019110.1 mouse_genomes_project 11 113421995 113427728 + MGP_NODShiLtJ_P0032649 Hexim2 protein_coding protein_coding MGP_NODShiLtJ_T0028867.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59054894 59068637 + MGP_NODShiLtJ_P0028867 P4ha2 protein_coding protein_coding MGP_NODShiLtJ_T0028868.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59055723 59087234 + MGP_NODShiLtJ_P0028868 P4ha2 protein_coding protein_coding MGP_NODShiLtJ_T0028869.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59055762 59082210 + P4ha2 protein_coding retained_intron MGP_NODShiLtJ_T0028870.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59055762 59087234 + MGP_NODShiLtJ_P0028870 P4ha2 protein_coding protein_coding MGP_NODShiLtJ_T0028871.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59055774 59066088 + P4ha2 protein_coding retained_intron MGP_NODShiLtJ_T0028872.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59055774 59087244 + MGP_NODShiLtJ_P0028872 P4ha2 protein_coding protein_coding MGP_NODShiLtJ_T0028873.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59055779 59064767 + MGP_NODShiLtJ_P0028873 P4ha2 protein_coding protein_coding MGP_NODShiLtJ_T0028874.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59055790 59066016 + MGP_NODShiLtJ_P0028874 P4ha2 protein_coding protein_coding MGP_NODShiLtJ_T0028875.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59055867 59066027 + MGP_NODShiLtJ_P0028875 P4ha2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028876.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59056044 59066027 + MGP_NODShiLtJ_P0028876 P4ha2 protein_coding protein_coding MGP_NODShiLtJ_T0028877.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59061777 59068727 + MGP_NODShiLtJ_P0028877 P4ha2 protein_coding protein_coding MGP_NODShiLtJ_T0028878.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59065473 59074687 + MGP_NODShiLtJ_P0028878 P4ha2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028879.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59067655 59068727 + P4ha2 protein_coding processed_transcript MGP_NODShiLtJ_T0028880.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59079109 59080499 + P4ha2 protein_coding retained_intron MGP_NODShiLtJ_T0028881.1 MGP_NODShiLtJ_G0018164.1 mouse_genomes_project 11 59082140 59087247 + P4ha2 protein_coding retained_intron MGP_NODShiLtJ_T0034025.1 MGP_NODShiLtJ_G0019396.1 mouse_genomes_project 11 133357918 133359621 + MGP_NODShiLtJ_P0034025 Uts2r protein_coding protein_coding MGP_NODShiLtJ_T0029533.1 MGP_NODShiLtJ_G0018338.1 mouse_genomes_project 11 73489369 73526326 + MGP_NODShiLtJ_P0029533 protein_coding protein_coding MGP_NODShiLtJ_T0029534.1 MGP_NODShiLtJ_G0018338.1 mouse_genomes_project 11 73489465 73526175 + MGP_NODShiLtJ_P0029534 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029535.1 MGP_NODShiLtJ_G0018338.1 mouse_genomes_project 11 73489663 73509327 + protein_coding retained_intron MGP_NODShiLtJ_T0029536.1 MGP_NODShiLtJ_G0018338.1 mouse_genomes_project 11 73489663 73495304 + MGP_NODShiLtJ_P0029536 protein_coding protein_coding MGP_NODShiLtJ_T0029537.1 MGP_NODShiLtJ_G0018338.1 mouse_genomes_project 11 73492234 73506258 + protein_coding retained_intron MGP_NODShiLtJ_T0028913.1 MGP_NODShiLtJ_G0018171.1 mouse_genomes_project 11 59717923 59793239 - MGP_NODShiLtJ_P0028913 Cdc42se2 protein_coding protein_coding MGP_NODShiLtJ_T0028914.1 MGP_NODShiLtJ_G0018171.1 mouse_genomes_project 11 59724041 59793210 - MGP_NODShiLtJ_P0028914 Cdc42se2 protein_coding protein_coding MGP_NODShiLtJ_T0028915.1 MGP_NODShiLtJ_G0018171.1 mouse_genomes_project 11 59740633 59793205 - Cdc42se2 protein_coding processed_transcript MGP_NODShiLtJ_T0028916.1 MGP_NODShiLtJ_G0018171.1 mouse_genomes_project 11 59740957 59793189 - Cdc42se2 protein_coding processed_transcript MGP_NODShiLtJ_T0028917.1 MGP_NODShiLtJ_G0018171.1 mouse_genomes_project 11 59741092 59761339 - Cdc42se2 protein_coding processed_transcript MGP_NODShiLtJ_T0003244.1 MGP_NODShiLtJ_G0002991.1 mouse_genomes_project 11 111352619 111354143 - Gm11615 antisense antisense MGP_NODShiLtJ_T0027971.1 MGP_NODShiLtJ_G0017929.1 mouse_genomes_project 11 21020464 21072773 - MGP_NODShiLtJ_P0027971 Ugp2 protein_coding protein_coding MGP_NODShiLtJ_T0027972.1 MGP_NODShiLtJ_G0017929.1 mouse_genomes_project 11 21021256 21029222 - Ugp2 protein_coding processed_transcript MGP_NODShiLtJ_T0027973.1 MGP_NODShiLtJ_G0017929.1 mouse_genomes_project 11 21021272 21022835 - Ugp2 protein_coding processed_transcript MGP_NODShiLtJ_T0027704.1 MGP_NODShiLtJ_G0017866.1 mouse_genomes_project 11 2988821 3004475 + MGP_NODShiLtJ_P0027704 Aebp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027705.1 MGP_NODShiLtJ_G0017866.1 mouse_genomes_project 11 2999983 3004470 + MGP_NODShiLtJ_P0027705 Aebp1 protein_coding protein_coding MGP_NODShiLtJ_T0027706.1 MGP_NODShiLtJ_G0017866.1 mouse_genomes_project 11 3001529 3002523 + Aebp1 protein_coding processed_transcript MGP_NODShiLtJ_T0006191.1 MGP_NODShiLtJ_G0005170.1 mouse_genomes_project 11 69299403 69304123 + B130011K05Rik lincRNA lincRNA MGP_NODShiLtJ_T0033805.1 MGP_NODShiLtJ_G0019352.1 mouse_genomes_project 11 132456714 132460231 + MGP_NODShiLtJ_P0033805 0610009L18Rik protein_coding protein_coding MGP_NODShiLtJ_T0029070.1 MGP_NODShiLtJ_G0018233.1 mouse_genomes_project 11 64385126 64396246 - MGP_NODShiLtJ_P0029070 protein_coding protein_coding MGP_NODShiLtJ_T0034010.1 MGP_NODShiLtJ_G0019392.1 mouse_genomes_project 11 133236235 133246083 - MGP_NODShiLtJ_P0034010 Sectm1b protein_coding protein_coding MGP_NODShiLtJ_T0034011.1 MGP_NODShiLtJ_G0019392.1 mouse_genomes_project 11 133237308 133246052 - MGP_NODShiLtJ_P0034011 Sectm1b protein_coding protein_coding MGP_NODShiLtJ_T0034012.1 MGP_NODShiLtJ_G0019392.1 mouse_genomes_project 11 133237313 133239141 - MGP_NODShiLtJ_P0034012 Sectm1b protein_coding protein_coding MGP_NODShiLtJ_T0034013.1 MGP_NODShiLtJ_G0019392.1 mouse_genomes_project 11 133237359 133246059 - MGP_NODShiLtJ_P0034013 Sectm1b protein_coding protein_coding MGP_NODShiLtJ_T0034014.1 MGP_NODShiLtJ_G0019392.1 mouse_genomes_project 11 133237734 133245969 - MGP_NODShiLtJ_P0034014 Sectm1b protein_coding protein_coding MGP_NODShiLtJ_T0034015.1 MGP_NODShiLtJ_G0019392.1 mouse_genomes_project 11 133238189 133245817 - Sectm1b protein_coding retained_intron MGP_NODShiLtJ_T0034016.1 MGP_NODShiLtJ_G0019392.1 mouse_genomes_project 11 133239011 133239406 - Sectm1b protein_coding processed_transcript MGP_NODShiLtJ_T0012375.1 MGP_NODShiLtJ_G0010483.1 mouse_genomes_project 11 15878875 15879788 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012600.1 MGP_NODShiLtJ_G0010708.1 mouse_genomes_project 11 104885258 104885434 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033184.1 MGP_NODShiLtJ_G0019239.1 mouse_genomes_project 11 127029347 127049367 - MGP_NODShiLtJ_P0033184 Hid1 protein_coding protein_coding MGP_NODShiLtJ_T0033185.1 MGP_NODShiLtJ_G0019239.1 mouse_genomes_project 11 127029347 127049404 - MGP_NODShiLtJ_P0033185 Hid1 protein_coding protein_coding MGP_NODShiLtJ_T0033186.1 MGP_NODShiLtJ_G0019239.1 mouse_genomes_project 11 127030649 127032646 - Hid1 protein_coding processed_transcript MGP_NODShiLtJ_T0033187.1 MGP_NODShiLtJ_G0019239.1 mouse_genomes_project 11 127035754 127036998 - Hid1 protein_coding processed_transcript MGP_NODShiLtJ_T0033188.1 MGP_NODShiLtJ_G0019239.1 mouse_genomes_project 11 127036983 127049315 - MGP_NODShiLtJ_P0033188 Hid1 protein_coding protein_coding MGP_NODShiLtJ_T0033189.1 MGP_NODShiLtJ_G0019239.1 mouse_genomes_project 11 127038317 127041967 - Hid1 protein_coding processed_transcript MGP_NODShiLtJ_T0033190.1 MGP_NODShiLtJ_G0019239.1 mouse_genomes_project 11 127038412 127049257 - Hid1 protein_coding processed_transcript MGP_NODShiLtJ_T0033191.1 MGP_NODShiLtJ_G0019239.1 mouse_genomes_project 11 127040322 127040963 - Hid1 protein_coding processed_transcript MGP_NODShiLtJ_T0029285.1 MGP_NODShiLtJ_G0018285.1 mouse_genomes_project 11 66866378 66871175 + MGP_NODShiLtJ_P0029285 Aldh3a1 protein_coding protein_coding MGP_NODShiLtJ_T0029286.1 MGP_NODShiLtJ_G0018285.1 mouse_genomes_project 11 66867462 66877262 + MGP_NODShiLtJ_P0029286 Aldh3a1 protein_coding protein_coding MGP_NODShiLtJ_T0029287.1 MGP_NODShiLtJ_G0018285.1 mouse_genomes_project 11 66867586 66877262 + MGP_NODShiLtJ_P0029287 Aldh3a1 protein_coding protein_coding MGP_NODShiLtJ_T0000822.1 MGP_NODShiLtJ_G0000752.1 mouse_genomes_project 11 18294220 18295777 - TEC TEC MGP_NODShiLtJ_T0003275.1 MGP_NODShiLtJ_G0003020.1 mouse_genomes_project 11 119013519 119025785 + Gm11655 antisense antisense MGP_NODShiLtJ_T0009614.1 MGP_NODShiLtJ_G0007747.1 mouse_genomes_project 11 77266410 77266480 + Mir6925 miRNA miRNA MGP_NODShiLtJ_T0027964.1 MGP_NODShiLtJ_G0017928.1 mouse_genomes_project 11 20931382 21020454 + MGP_NODShiLtJ_P0027964 Vps54 protein_coding protein_coding MGP_NODShiLtJ_T0027965.1 MGP_NODShiLtJ_G0017928.1 mouse_genomes_project 11 20931382 21020468 + MGP_NODShiLtJ_P0027965 Vps54 protein_coding protein_coding MGP_NODShiLtJ_T0027966.1 MGP_NODShiLtJ_G0017928.1 mouse_genomes_project 11 20967442 21019657 + MGP_NODShiLtJ_P0027966 Vps54 protein_coding protein_coding MGP_NODShiLtJ_T0027967.1 MGP_NODShiLtJ_G0017928.1 mouse_genomes_project 11 20976414 20991686 + Vps54 protein_coding processed_transcript MGP_NODShiLtJ_T0027968.1 MGP_NODShiLtJ_G0017928.1 mouse_genomes_project 11 20999637 21006560 + Vps54 protein_coding processed_transcript MGP_NODShiLtJ_T0027969.1 MGP_NODShiLtJ_G0017928.1 mouse_genomes_project 11 21011824 21014313 + Vps54 protein_coding processed_transcript MGP_NODShiLtJ_T0027970.1 MGP_NODShiLtJ_G0017928.1 mouse_genomes_project 11 21013400 21019870 + Vps54 protein_coding processed_transcript MGP_NODShiLtJ_T0003069.1 MGP_NODShiLtJ_G0002849.1 mouse_genomes_project 11 4496215 4499353 - antisense antisense MGP_NODShiLtJ_T0029047.1 MGP_NODShiLtJ_G0018218.1 mouse_genomes_project 11 64011755 64024186 + MGP_NODShiLtJ_P0029047 Trim58 protein_coding protein_coding MGP_NODShiLtJ_T0006303.1 MGP_NODShiLtJ_G0005250.1 mouse_genomes_project 11 128905894 128907726 + Gm11731 lincRNA lincRNA MGP_NODShiLtJ_T0098720.1 MGP_NODShiLtJ_G0037114.1 mouse_genomes_project 11 105588900 105589084 - Gm22423 snRNA snRNA MGP_NODShiLtJ_T0028449.1 MGP_NODShiLtJ_G0018046.1 mouse_genomes_project 11 50190499 50194845 + MGP_NODShiLtJ_P0028449 Fndc9 protein_coding protein_coding MGP_NODShiLtJ_T0032084.1 MGP_NODShiLtJ_G0018997.1 mouse_genomes_project 11 110162300 110168466 - MGP_NODShiLtJ_P0032084 Krt9 protein_coding protein_coding MGP_NODShiLtJ_T0011194.1 MGP_NODShiLtJ_G0009327.1 mouse_genomes_project 11 79057469 79057740 + Gm23224 misc_RNA misc_RNA MGP_NODShiLtJ_T0012510.1 MGP_NODShiLtJ_G0010618.1 mouse_genomes_project 11 66019642 66020084 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003173.1 MGP_NODShiLtJ_G0002937.1 mouse_genomes_project 11 82112450 82113172 - Gm28180 antisense antisense MGP_NODShiLtJ_T0030533.1 MGP_NODShiLtJ_G0018573.1 mouse_genomes_project 11 83188371 83192037 + MGP_NODShiLtJ_P0030533 1700016K19Rik protein_coding protein_coding MGP_NODShiLtJ_T0031774.1 MGP_NODShiLtJ_G0018881.1 mouse_genomes_project 11 107044771 107136632 + MGP_NODShiLtJ_P0031774 Arhgap23 protein_coding protein_coding MGP_NODShiLtJ_T0031775.1 MGP_NODShiLtJ_G0018881.1 mouse_genomes_project 11 107044843 107126109 + MGP_NODShiLtJ_P0031775 Arhgap23 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031776.1 MGP_NODShiLtJ_G0018881.1 mouse_genomes_project 11 107068760 107076705 + Arhgap23 protein_coding processed_transcript MGP_NODShiLtJ_T0031777.1 MGP_NODShiLtJ_G0018881.1 mouse_genomes_project 11 107082636 107136630 + MGP_NODShiLtJ_P0031777 Arhgap23 protein_coding protein_coding MGP_NODShiLtJ_T0031778.1 MGP_NODShiLtJ_G0018881.1 mouse_genomes_project 11 107084618 107136632 + MGP_NODShiLtJ_P0031778 Arhgap23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031780.1 MGP_NODShiLtJ_G0018881.1 mouse_genomes_project 11 107125589 107136628 + MGP_NODShiLtJ_P0031780 Arhgap23 protein_coding protein_coding MGP_NODShiLtJ_T0032063.1 MGP_NODShiLtJ_G0018983.1 mouse_genomes_project 11 109903197 109904274 + MGP_NODShiLtJ_P0032063 Krtap9-5 protein_coding protein_coding MGP_NODShiLtJ_T0012342.1 MGP_NODShiLtJ_G0010450.1 mouse_genomes_project 11 1157339 1157848 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029532.1 MGP_NODShiLtJ_G0018337.1 mouse_genomes_project 11 73391848 73393966 + MGP_NODShiLtJ_P0029532 protein_coding protein_coding MGP_NODShiLtJ_T0030076.1 MGP_NODShiLtJ_G0018453.1 mouse_genomes_project 11 77173437 77174465 + MGP_NODShiLtJ_P0030076 4930544D05Rik protein_coding protein_coding MGP_NODShiLtJ_T0030077.1 MGP_NODShiLtJ_G0018453.1 mouse_genomes_project 11 77173483 77174460 + 4930544D05Rik protein_coding retained_intron MGP_NODShiLtJ_T0030078.1 MGP_NODShiLtJ_G0018453.1 mouse_genomes_project 11 77173486 77174480 + MGP_NODShiLtJ_P0030078 4930544D05Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030079.1 MGP_NODShiLtJ_G0018453.1 mouse_genomes_project 11 77173499 77174467 + MGP_NODShiLtJ_P0030079 4930544D05Rik protein_coding protein_coding MGP_NODShiLtJ_T0101569.1 MGP_NODShiLtJ_G0039739.1 mouse_genomes_project 11 109569599 109569722 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0028071.1 MGP_NODShiLtJ_G0017952.1 mouse_genomes_project 11 24287026 24388001 + MGP_NODShiLtJ_P0028071 Bcl11a protein_coding protein_coding MGP_NODShiLtJ_T0028072.1 MGP_NODShiLtJ_G0017952.1 mouse_genomes_project 11 24287087 24388930 + MGP_NODShiLtJ_P0028072 Bcl11a protein_coding protein_coding MGP_NODShiLtJ_T0028073.1 MGP_NODShiLtJ_G0017952.1 mouse_genomes_project 11 24287117 24300718 + Bcl11a protein_coding retained_intron MGP_NODShiLtJ_T0028074.1 MGP_NODShiLtJ_G0017952.1 mouse_genomes_project 11 24287143 24383248 + MGP_NODShiLtJ_P0028074 Bcl11a protein_coding protein_coding MGP_NODShiLtJ_T0028075.1 MGP_NODShiLtJ_G0017952.1 mouse_genomes_project 11 24289642 24388365 + MGP_NODShiLtJ_P0028075 Bcl11a protein_coding protein_coding MGP_NODShiLtJ_T0028076.1 MGP_NODShiLtJ_G0017952.1 mouse_genomes_project 11 24355333 24378182 + Bcl11a protein_coding processed_transcript MGP_NODShiLtJ_T0032057.1 MGP_NODShiLtJ_G0018977.1 mouse_genomes_project 11 109790402 109792211 + MGP_NODShiLtJ_P0032057 protein_coding protein_coding MGP_NODShiLtJ_T0031842.1 MGP_NODShiLtJ_G0018896.1 mouse_genomes_project 11 107684050 107691612 - MGP_NODShiLtJ_P0031842 Arl5c protein_coding protein_coding MGP_NODShiLtJ_T0031843.1 MGP_NODShiLtJ_G0018896.1 mouse_genomes_project 11 107689265 107691360 - MGP_NODShiLtJ_P0031843 Arl5c protein_coding protein_coding MGP_NODShiLtJ_T0012613.1 MGP_NODShiLtJ_G0010721.1 mouse_genomes_project 11 108705751 108706111 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032085.1 MGP_NODShiLtJ_G0018998.1 mouse_genomes_project 11 110178377 110181246 - Krt14 protein_coding processed_transcript MGP_NODShiLtJ_T0032086.1 MGP_NODShiLtJ_G0018998.1 mouse_genomes_project 11 110178377 110182740 - MGP_NODShiLtJ_P0032086 Krt14 protein_coding protein_coding MGP_NODShiLtJ_T0012373.1 MGP_NODShiLtJ_G0010481.1 mouse_genomes_project 11 15644659 15645725 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012528.1 MGP_NODShiLtJ_G0010636.1 mouse_genomes_project 11 74366618 74367004 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031907.1 MGP_NODShiLtJ_G0018912.1 mouse_genomes_project 11 108201951 108287741 - MGP_NODShiLtJ_P0031907 Ikzf3 protein_coding protein_coding MGP_NODShiLtJ_T0031908.1 MGP_NODShiLtJ_G0018912.1 mouse_genomes_project 11 108204307 108215347 - Ikzf3 protein_coding processed_transcript MGP_NODShiLtJ_T0031909.1 MGP_NODShiLtJ_G0018912.1 mouse_genomes_project 11 108222140 108228388 - Ikzf3 protein_coding processed_transcript MGP_NODShiLtJ_T0031910.1 MGP_NODShiLtJ_G0018912.1 mouse_genomes_project 11 108252913 108287972 - Ikzf3 protein_coding retained_intron MGP_NODShiLtJ_T0003318.1 MGP_NODShiLtJ_G0003051.1 mouse_genomes_project 11 132832051 132853452 - Gm17178 antisense antisense MGP_NODShiLtJ_T0028265.1 MGP_NODShiLtJ_G0017995.1 mouse_genomes_project 11 34579263 34585730 - MGP_NODShiLtJ_P0028265 Smim23 protein_coding protein_coding MGP_NODShiLtJ_T0028266.1 MGP_NODShiLtJ_G0017995.1 mouse_genomes_project 11 34581107 34585773 - MGP_NODShiLtJ_P0028266 Smim23 protein_coding protein_coding MGP_NODShiLtJ_T0030964.1 MGP_NODShiLtJ_G0018676.1 mouse_genomes_project 11 90097434 90162457 + MGP_NODShiLtJ_P0030964 Tmem132e protein_coding protein_coding MGP_NODShiLtJ_T0030965.1 MGP_NODShiLtJ_G0018676.1 mouse_genomes_project 11 90097434 90162452 + MGP_NODShiLtJ_P0030965 Tmem132e protein_coding protein_coding MGP_NODShiLtJ_T0030966.1 MGP_NODShiLtJ_G0018676.1 mouse_genomes_project 11 90097668 90149073 + Tmem132e protein_coding processed_transcript MGP_NODShiLtJ_T0030967.1 MGP_NODShiLtJ_G0018676.1 mouse_genomes_project 11 90154381 90159024 + Tmem132e protein_coding retained_intron MGP_NODShiLtJ_T0099953.1 MGP_NODShiLtJ_G0038347.1 mouse_genomes_project 11 99377041 99377178 - Gm22762 snoRNA snoRNA MGP_NODShiLtJ_T0032730.1 MGP_NODShiLtJ_G0019130.1 mouse_genomes_project 11 114962802 115002713 + MGP_NODShiLtJ_P0032730 Myl4 protein_coding protein_coding MGP_NODShiLtJ_T0032731.1 MGP_NODShiLtJ_G0019130.1 mouse_genomes_project 11 114989816 115001245 + MGP_NODShiLtJ_P0032731 Myl4 protein_coding protein_coding MGP_NODShiLtJ_T0032732.1 MGP_NODShiLtJ_G0019130.1 mouse_genomes_project 11 114992437 115002713 + MGP_NODShiLtJ_P0032732 Myl4 protein_coding protein_coding MGP_NODShiLtJ_T0032733.1 MGP_NODShiLtJ_G0019130.1 mouse_genomes_project 11 114992469 115000511 + MGP_NODShiLtJ_P0032733 Myl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032734.1 MGP_NODShiLtJ_G0019130.1 mouse_genomes_project 11 114992733 115002713 + MGP_NODShiLtJ_P0032734 Myl4 protein_coding protein_coding MGP_NODShiLtJ_T0032735.1 MGP_NODShiLtJ_G0019130.1 mouse_genomes_project 11 114995779 115002707 + Myl4 protein_coding retained_intron MGP_NODShiLtJ_T0032736.1 MGP_NODShiLtJ_G0019130.1 mouse_genomes_project 11 114997492 115001844 + Myl4 protein_coding retained_intron MGP_NODShiLtJ_T0032737.1 MGP_NODShiLtJ_G0019130.1 mouse_genomes_project 11 115000460 115011238 + MGP_NODShiLtJ_P0032737 Myl4 protein_coding protein_coding MGP_NODShiLtJ_T0003121.1 MGP_NODShiLtJ_G0002894.1 mouse_genomes_project 11 60586449 60598981 + Gm12236 antisense antisense MGP_NODShiLtJ_T0030393.1 MGP_NODShiLtJ_G0018544.1 mouse_genomes_project 11 81750165 81757235 + Cluh protein_coding processed_transcript MGP_NODShiLtJ_T0030394.1 MGP_NODShiLtJ_G0018544.1 mouse_genomes_project 11 81750185 81770578 + MGP_NODShiLtJ_P0030394 Cluh protein_coding protein_coding MGP_NODShiLtJ_T0030395.1 MGP_NODShiLtJ_G0018544.1 mouse_genomes_project 11 81750185 81771520 + MGP_NODShiLtJ_P0030395 Cluh protein_coding protein_coding MGP_NODShiLtJ_T0030396.1 MGP_NODShiLtJ_G0018544.1 mouse_genomes_project 11 81750210 81771520 + Cluh protein_coding retained_intron MGP_NODShiLtJ_T0030397.1 MGP_NODShiLtJ_G0018544.1 mouse_genomes_project 11 81750500 81758023 + Cluh protein_coding processed_transcript MGP_NODShiLtJ_T0030398.1 MGP_NODShiLtJ_G0018544.1 mouse_genomes_project 11 81765148 81765975 + Cluh protein_coding retained_intron MGP_NODShiLtJ_T0012384.1 MGP_NODShiLtJ_G0010492.1 mouse_genomes_project 11 18825832 18827304 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017133.1 MGP_NODShiLtJ_G0015081.1 mouse_genomes_project 11 114015905 114041352 + C130046K22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017134.1 MGP_NODShiLtJ_G0015081.1 mouse_genomes_project 11 114015905 114021592 + C130046K22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0029629.1 MGP_NODShiLtJ_G0018360.1 mouse_genomes_project 11 75319343 75323340 - Rangrf protein_coding processed_transcript MGP_NODShiLtJ_T0029630.1 MGP_NODShiLtJ_G0018360.1 mouse_genomes_project 11 75319343 75319872 - Rangrf protein_coding processed_transcript MGP_NODShiLtJ_T0029631.1 MGP_NODShiLtJ_G0018360.1 mouse_genomes_project 11 75319343 75321944 - Rangrf protein_coding processed_transcript MGP_NODShiLtJ_T0029632.1 MGP_NODShiLtJ_G0018360.1 mouse_genomes_project 11 75319343 75321998 - MGP_NODShiLtJ_P0029632 Rangrf protein_coding protein_coding MGP_NODShiLtJ_T0029633.1 MGP_NODShiLtJ_G0018360.1 mouse_genomes_project 11 75319346 75320203 - Rangrf protein_coding processed_transcript MGP_NODShiLtJ_T0029634.1 MGP_NODShiLtJ_G0018360.1 mouse_genomes_project 11 75319347 75320305 - Rangrf protein_coding processed_transcript MGP_NODShiLtJ_T0029635.1 MGP_NODShiLtJ_G0018360.1 mouse_genomes_project 11 75319354 75320228 - Rangrf protein_coding processed_transcript MGP_NODShiLtJ_T0029636.1 MGP_NODShiLtJ_G0018360.1 mouse_genomes_project 11 75319357 75320056 - Rangrf protein_coding processed_transcript MGP_NODShiLtJ_T0030228.1 MGP_NODShiLtJ_G0018481.1 mouse_genomes_project 11 78928311 78932126 - MGP_NODShiLtJ_P0030228 Med31 protein_coding protein_coding MGP_NODShiLtJ_T0030229.1 MGP_NODShiLtJ_G0018481.1 mouse_genomes_project 11 78929795 78931587 - Med31 protein_coding retained_intron MGP_NODShiLtJ_T0027719.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3123926 3216824 - MGP_NODShiLtJ_P0027719 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027720.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3123942 3138399 - Camk2b protein_coding processed_transcript MGP_NODShiLtJ_T0027721.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3123946 3216639 - MGP_NODShiLtJ_P0027721 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027722.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3123946 3216824 - MGP_NODShiLtJ_P0027722 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027723.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3125828 3216639 - MGP_NODShiLtJ_P0027723 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027724.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3125929 3216658 - MGP_NODShiLtJ_P0027724 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027725.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3125932 3216621 - MGP_NODShiLtJ_P0027725 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027726.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3125932 3216818 - MGP_NODShiLtJ_P0027726 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027727.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3125940 3216688 - MGP_NODShiLtJ_P0027727 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027728.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3125995 3216614 - MGP_NODShiLtJ_P0027728 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027729.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3126477 3216646 - MGP_NODShiLtJ_P0027729 Camk2b protein_coding protein_coding MGP_NODShiLtJ_T0027730.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3142360 3216614 - Camk2b protein_coding processed_transcript MGP_NODShiLtJ_T0027731.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3144654 3154724 - Camk2b protein_coding processed_transcript MGP_NODShiLtJ_T0027732.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3147079 3217438 - Camk2b protein_coding processed_transcript MGP_NODShiLtJ_T0027733.1 MGP_NODShiLtJ_G0017871.1 mouse_genomes_project 11 3160830 3216734 - Camk2b protein_coding processed_transcript MGP_NODShiLtJ_T0031050.1 MGP_NODShiLtJ_G0018700.1 mouse_genomes_project 11 91385670 91396118 - MGP_NODShiLtJ_P0031050 Heatr9 protein_coding protein_coding MGP_NODShiLtJ_T0006219.1 MGP_NODShiLtJ_G0005192.1 mouse_genomes_project 11 85901899 85902694 + Gm11195 lincRNA lincRNA MGP_NODShiLtJ_T0032020.1 MGP_NODShiLtJ_G0018942.1 mouse_genomes_project 11 109276534 109283148 - MGP_NODShiLtJ_P0032020 Krt12 protein_coding protein_coding MGP_NODShiLtJ_T0009630.1 MGP_NODShiLtJ_G0007763.1 mouse_genomes_project 11 87230818 87230884 + Mir193a miRNA miRNA MGP_NODShiLtJ_T0006261.1 MGP_NODShiLtJ_G0005220.1 mouse_genomes_project 11 105796979 105813331 + Gm53 lincRNA lincRNA MGP_NODShiLtJ_T0006262.1 MGP_NODShiLtJ_G0005220.1 mouse_genomes_project 11 105798066 105813545 + Gm53 lincRNA lincRNA MGP_NODShiLtJ_T0006263.1 MGP_NODShiLtJ_G0005220.1 mouse_genomes_project 11 105798954 105810552 + Gm53 lincRNA lincRNA MGP_NODShiLtJ_T0006264.1 MGP_NODShiLtJ_G0005220.1 mouse_genomes_project 11 105810468 105813715 + Gm53 lincRNA lincRNA MGP_NODShiLtJ_T0033983.1 MGP_NODShiLtJ_G0019387.1 mouse_genomes_project 11 132969817 132988519 - MGP_NODShiLtJ_P0033983 Fasn protein_coding protein_coding MGP_NODShiLtJ_T0033984.1 MGP_NODShiLtJ_G0019387.1 mouse_genomes_project 11 132971076 132988067 - MGP_NODShiLtJ_P0033984 Fasn protein_coding protein_coding MGP_NODShiLtJ_T0033985.1 MGP_NODShiLtJ_G0019387.1 mouse_genomes_project 11 132971518 132972577 - Fasn protein_coding retained_intron MGP_NODShiLtJ_T0033986.1 MGP_NODShiLtJ_G0019387.1 mouse_genomes_project 11 132972535 132973673 - Fasn protein_coding retained_intron MGP_NODShiLtJ_T0033987.1 MGP_NODShiLtJ_G0019387.1 mouse_genomes_project 11 132978466 132979427 - Fasn protein_coding retained_intron MGP_NODShiLtJ_T0033988.1 MGP_NODShiLtJ_G0019387.1 mouse_genomes_project 11 132986743 132987752 - MGP_NODShiLtJ_P0033988 Fasn protein_coding protein_coding MGP_NODShiLtJ_T0099902.1 MGP_NODShiLtJ_G0038296.1 mouse_genomes_project 11 3841611 3841747 - Snora5c snoRNA snoRNA MGP_NODShiLtJ_T0012658.1 MGP_NODShiLtJ_G0010766.1 mouse_genomes_project 11 127296103 127296640 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033517.1 MGP_NODShiLtJ_G0019297.1 mouse_genomes_project 11 128642267 128648127 - Jmjd6 protein_coding retained_intron MGP_NODShiLtJ_T0033518.1 MGP_NODShiLtJ_G0019297.1 mouse_genomes_project 11 128642267 128648295 - MGP_NODShiLtJ_P0033518 Jmjd6 protein_coding protein_coding MGP_NODShiLtJ_T0033519.1 MGP_NODShiLtJ_G0019297.1 mouse_genomes_project 11 128642268 128648136 - Jmjd6 protein_coding retained_intron MGP_NODShiLtJ_T0033520.1 MGP_NODShiLtJ_G0019297.1 mouse_genomes_project 11 128642268 128648201 - MGP_NODShiLtJ_P0033520 Jmjd6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033521.1 MGP_NODShiLtJ_G0019297.1 mouse_genomes_project 11 128642270 128646081 - MGP_NODShiLtJ_P0033521 Jmjd6 protein_coding protein_coding MGP_NODShiLtJ_T0033522.1 MGP_NODShiLtJ_G0019297.1 mouse_genomes_project 11 128642423 128647551 - MGP_NODShiLtJ_P0033522 Jmjd6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033523.1 MGP_NODShiLtJ_G0019297.1 mouse_genomes_project 11 128642448 128647566 - MGP_NODShiLtJ_P0033523 Jmjd6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031227.1 MGP_NODShiLtJ_G0018742.1 mouse_genomes_project 11 94847840 94857836 + MGP_NODShiLtJ_P0031227 Ptrh2 protein_coding protein_coding MGP_NODShiLtJ_T0031228.1 MGP_NODShiLtJ_G0018742.1 mouse_genomes_project 11 94847840 94857836 + MGP_NODShiLtJ_P0031228 Ptrh2 protein_coding protein_coding MGP_NODShiLtJ_T0017053.1 MGP_NODShiLtJ_G0015033.1 mouse_genomes_project 11 31725852 31741141 + Gm8098 processed_transcript processed_transcript MGP_NODShiLtJ_T0098253.1 MGP_NODShiLtJ_G0036664.1 mouse_genomes_project 11 37188118 37188805 + Gm12122 sense_intronic sense_intronic MGP_NODShiLtJ_T0030379.1 MGP_NODShiLtJ_G0018538.1 mouse_genomes_project 11 81309678 81315605 + MGP_NODShiLtJ_P0030379 Olfr59 protein_coding protein_coding MGP_NODShiLtJ_T0030380.1 MGP_NODShiLtJ_G0018538.1 mouse_genomes_project 11 81309736 81315441 + MGP_NODShiLtJ_P0030380 Olfr59 protein_coding protein_coding MGP_NODShiLtJ_T0030381.1 MGP_NODShiLtJ_G0018538.1 mouse_genomes_project 11 81309751 81315891 + MGP_NODShiLtJ_P0030381 Olfr59 protein_coding protein_coding MGP_NODShiLtJ_T0030382.1 MGP_NODShiLtJ_G0018538.1 mouse_genomes_project 11 81309775 81315440 + MGP_NODShiLtJ_P0030382 Olfr59 protein_coding protein_coding MGP_NODShiLtJ_T0032322.1 MGP_NODShiLtJ_G0019052.1 mouse_genomes_project 11 111531129 111543165 - MGP_NODShiLtJ_P0032322 Aarsd1 protein_coding protein_coding MGP_NODShiLtJ_T0032324.1 MGP_NODShiLtJ_G0019052.1 mouse_genomes_project 11 111535421 111542934 - Aarsd1 protein_coding processed_transcript MGP_NODShiLtJ_T0032325.1 MGP_NODShiLtJ_G0019052.1 mouse_genomes_project 11 111536022 111542932 - Aarsd1 protein_coding retained_intron MGP_NODShiLtJ_T0032326.1 MGP_NODShiLtJ_G0019052.1 mouse_genomes_project 11 111538470 111539287 - Aarsd1 protein_coding retained_intron MGP_NODShiLtJ_T0032327.1 MGP_NODShiLtJ_G0019052.1 mouse_genomes_project 11 111542297 111542956 - Aarsd1 protein_coding retained_intron MGP_NODShiLtJ_T0029386.1 MGP_NODShiLtJ_G0018303.1 mouse_genomes_project 11 68041405 68042520 + Ttc19 protein_coding processed_transcript MGP_NODShiLtJ_T0029387.1 MGP_NODShiLtJ_G0018303.1 mouse_genomes_project 11 68041414 68077728 + MGP_NODShiLtJ_P0029387 Ttc19 protein_coding protein_coding MGP_NODShiLtJ_T0029388.1 MGP_NODShiLtJ_G0018303.1 mouse_genomes_project 11 68041416 68078908 + MGP_NODShiLtJ_P0029388 Ttc19 protein_coding protein_coding MGP_NODShiLtJ_T0029389.1 MGP_NODShiLtJ_G0018303.1 mouse_genomes_project 11 68044964 68092149 + MGP_NODShiLtJ_P0029389 Ttc19 protein_coding protein_coding MGP_NODShiLtJ_T0029390.1 MGP_NODShiLtJ_G0018303.1 mouse_genomes_project 11 68072216 68092404 + Ttc19 protein_coding processed_transcript MGP_NODShiLtJ_T0098174.1 MGP_NODShiLtJ_G0036586.1 mouse_genomes_project 11 9946536 9946664 - Gm25058 scaRNA scaRNA MGP_NODShiLtJ_T0030205.1 MGP_NODShiLtJ_G0018475.1 mouse_genomes_project 11 78731180 78740705 - MGP_NODShiLtJ_P0030205 Aipl1 protein_coding protein_coding MGP_NODShiLtJ_T0030206.1 MGP_NODShiLtJ_G0018475.1 mouse_genomes_project 11 78731934 78740725 - MGP_NODShiLtJ_P0030206 Aipl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029626.1 MGP_NODShiLtJ_G0018359.1 mouse_genomes_project 11 75314587 75319376 + MGP_NODShiLtJ_P0029626 Slc25a35 protein_coding protein_coding MGP_NODShiLtJ_T0029627.1 MGP_NODShiLtJ_G0018359.1 mouse_genomes_project 11 75314603 75318642 + Slc25a35 protein_coding processed_transcript MGP_NODShiLtJ_T0029628.1 MGP_NODShiLtJ_G0018359.1 mouse_genomes_project 11 75314604 75322520 + MGP_NODShiLtJ_P0029628 Slc25a35 protein_coding protein_coding MGP_NODShiLtJ_T0033165.1 MGP_NODShiLtJ_G0019232.1 mouse_genomes_project 11 126856575 126919729 + MGP_NODShiLtJ_P0033165 Tmem104 protein_coding protein_coding MGP_NODShiLtJ_T0033166.1 MGP_NODShiLtJ_G0019232.1 mouse_genomes_project 11 126856575 126919729 + MGP_NODShiLtJ_P0033166 Tmem104 protein_coding protein_coding MGP_NODShiLtJ_T0033167.1 MGP_NODShiLtJ_G0019232.1 mouse_genomes_project 11 126856599 126868212 + Tmem104 protein_coding processed_transcript MGP_NODShiLtJ_T0033168.1 MGP_NODShiLtJ_G0019232.1 mouse_genomes_project 11 126856639 126918471 + Tmem104 protein_coding processed_transcript MGP_NODShiLtJ_T0098684.1 MGP_NODShiLtJ_G0037078.1 mouse_genomes_project 11 59839441 59839611 + Gm23021 snRNA snRNA MGP_NODShiLtJ_T0027631.1 MGP_NODShiLtJ_G0017851.1 mouse_genomes_project 11 2070429 2082577 - Gas2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0027632.1 MGP_NODShiLtJ_G0017851.1 mouse_genomes_project 11 2072674 2082583 - MGP_NODShiLtJ_P0027632 Gas2l1 protein_coding protein_coding MGP_NODShiLtJ_T0027635.1 MGP_NODShiLtJ_G0017851.1 mouse_genomes_project 11 2077656 2082610 - MGP_NODShiLtJ_P0027635 Gas2l1 protein_coding protein_coding MGP_NODShiLtJ_T0027636.1 MGP_NODShiLtJ_G0017851.1 mouse_genomes_project 11 2077665 2082560 - MGP_NODShiLtJ_P0027636 Gas2l1 protein_coding protein_coding MGP_NODShiLtJ_T0027637.1 MGP_NODShiLtJ_G0017851.1 mouse_genomes_project 11 2077754 2082134 - Gas2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0027638.1 MGP_NODShiLtJ_G0017851.1 mouse_genomes_project 11 2081155 2082561 - MGP_NODShiLtJ_P0027638 Gas2l1 protein_coding protein_coding MGP_NODShiLtJ_T0027639.1 MGP_NODShiLtJ_G0017851.1 mouse_genomes_project 11 2081699 2082577 - Gas2l1 protein_coding processed_transcript MGP_NODShiLtJ_T0030700.1 MGP_NODShiLtJ_G0018607.1 mouse_genomes_project 11 85405717 85454879 + MGP_NODShiLtJ_P0030700 Phf12 protein_coding protein_coding MGP_NODShiLtJ_T0030701.1 MGP_NODShiLtJ_G0018607.1 mouse_genomes_project 11 85405765 85459204 + MGP_NODShiLtJ_P0030701 Phf12 protein_coding protein_coding MGP_NODShiLtJ_T0030702.1 MGP_NODShiLtJ_G0018607.1 mouse_genomes_project 11 85451090 85454857 + MGP_NODShiLtJ_P0030702 Phf12 protein_coding protein_coding MGP_NODShiLtJ_T0030703.1 MGP_NODShiLtJ_G0018607.1 mouse_genomes_project 11 85451304 85454626 + Phf12 protein_coding retained_intron MGP_NODShiLtJ_T0030704.1 MGP_NODShiLtJ_G0018607.1 mouse_genomes_project 11 85451338 85454847 + MGP_NODShiLtJ_P0030704 Phf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030705.1 MGP_NODShiLtJ_G0018607.1 mouse_genomes_project 11 85451405 85457512 + MGP_NODShiLtJ_P0030705 Phf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030706.1 MGP_NODShiLtJ_G0018607.1 mouse_genomes_project 11 85451428 85454681 + MGP_NODShiLtJ_P0030706 Phf12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030707.1 MGP_NODShiLtJ_G0018607.1 mouse_genomes_project 11 85456774 85458242 + Phf12 protein_coding retained_intron MGP_NODShiLtJ_T0029262.1 MGP_NODShiLtJ_G0018280.1 mouse_genomes_project 11 66537454 66550063 - MGP_NODShiLtJ_P0029262 Natd1 protein_coding protein_coding MGP_NODShiLtJ_T0029263.1 MGP_NODShiLtJ_G0018280.1 mouse_genomes_project 11 66541162 66551001 - Natd1 protein_coding processed_transcript MGP_NODShiLtJ_T0031977.1 MGP_NODShiLtJ_G0018928.1 mouse_genomes_project 11 108712324 108765910 + MGP_NODShiLtJ_P0031977 Rara protein_coding protein_coding MGP_NODShiLtJ_T0031978.1 MGP_NODShiLtJ_G0018928.1 mouse_genomes_project 11 108722208 108765910 + MGP_NODShiLtJ_P0031978 Rara protein_coding protein_coding MGP_NODShiLtJ_T0031979.1 MGP_NODShiLtJ_G0018928.1 mouse_genomes_project 11 108722228 108766676 + MGP_NODShiLtJ_P0031979 Rara protein_coding protein_coding MGP_NODShiLtJ_T0031980.1 MGP_NODShiLtJ_G0018928.1 mouse_genomes_project 11 108722838 108736073 + Rara protein_coding processed_transcript MGP_NODShiLtJ_T0031981.1 MGP_NODShiLtJ_G0018928.1 mouse_genomes_project 11 108724221 108766676 + MGP_NODShiLtJ_P0031981 Rara protein_coding protein_coding MGP_NODShiLtJ_T0031982.1 MGP_NODShiLtJ_G0018928.1 mouse_genomes_project 11 108724222 108736202 + Rara protein_coding processed_transcript MGP_NODShiLtJ_T0031983.1 MGP_NODShiLtJ_G0018928.1 mouse_genomes_project 11 108751075 108766676 + MGP_NODShiLtJ_P0031983 Rara protein_coding protein_coding MGP_NODShiLtJ_T0027734.1 MGP_NODShiLtJ_G0017872.1 mouse_genomes_project 11 3262650 3355549 - MGP_NODShiLtJ_P0027734 Nudcd3 protein_coding protein_coding MGP_NODShiLtJ_T0027735.1 MGP_NODShiLtJ_G0017872.1 mouse_genomes_project 11 3262945 3278054 - Nudcd3 protein_coding processed_transcript MGP_NODShiLtJ_T0027736.1 MGP_NODShiLtJ_G0017872.1 mouse_genomes_project 11 3263417 3348390 - MGP_NODShiLtJ_P0027736 Nudcd3 protein_coding protein_coding MGP_NODShiLtJ_T0027737.1 MGP_NODShiLtJ_G0017872.1 mouse_genomes_project 11 3281568 3348390 - Nudcd3 protein_coding retained_intron MGP_NODShiLtJ_T0009596.1 MGP_NODShiLtJ_G0007729.1 mouse_genomes_project 11 65865233 65865351 - Gm27711 miRNA miRNA MGP_NODShiLtJ_T0011189.1 MGP_NODShiLtJ_G0009322.1 mouse_genomes_project 11 55884775 55885030 + Gm25082 misc_RNA misc_RNA MGP_NODShiLtJ_T0033193.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127095442 127104365 + MGP_NODShiLtJ_P0033193 Ict1 protein_coding protein_coding MGP_NODShiLtJ_T0033194.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127095444 127104353 + MGP_NODShiLtJ_P0033194 Ict1 protein_coding protein_coding MGP_NODShiLtJ_T0033195.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127095447 127102610 + MGP_NODShiLtJ_P0033195 Ict1 protein_coding protein_coding MGP_NODShiLtJ_T0033196.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127095457 127101744 + Ict1 protein_coding retained_intron MGP_NODShiLtJ_T0033197.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127095461 127101952 + MGP_NODShiLtJ_P0033197 Ict1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033198.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127095467 127102450 + Ict1 protein_coding processed_transcript MGP_NODShiLtJ_T0033199.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127095472 127101942 + Ict1 protein_coding retained_intron MGP_NODShiLtJ_T0033200.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127095512 127102415 + Ict1 protein_coding processed_transcript MGP_NODShiLtJ_T0033201.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127101551 127102410 + Ict1 protein_coding retained_intron MGP_NODShiLtJ_T0033202.1 MGP_NODShiLtJ_G0019241.1 mouse_genomes_project 11 127101850 127102599 + Ict1 protein_coding retained_intron MGP_NODShiLtJ_T0033411.1 MGP_NODShiLtJ_G0019275.1 mouse_genomes_project 11 127924727 127935868 - Acox1 protein_coding processed_transcript MGP_NODShiLtJ_T0033412.1 MGP_NODShiLtJ_G0019275.1 mouse_genomes_project 11 127924727 127953418 - MGP_NODShiLtJ_P0033412 Acox1 protein_coding protein_coding MGP_NODShiLtJ_T0033413.1 MGP_NODShiLtJ_G0019275.1 mouse_genomes_project 11 127924727 127955027 - MGP_NODShiLtJ_P0033413 Acox1 protein_coding protein_coding MGP_NODShiLtJ_T0033414.1 MGP_NODShiLtJ_G0019275.1 mouse_genomes_project 11 127924727 127943179 - MGP_NODShiLtJ_P0033414 Acox1 protein_coding protein_coding MGP_NODShiLtJ_T0033415.1 MGP_NODShiLtJ_G0019275.1 mouse_genomes_project 11 127928182 127935119 - Acox1 protein_coding processed_transcript MGP_NODShiLtJ_T0033416.1 MGP_NODShiLtJ_G0019275.1 mouse_genomes_project 11 127932911 127936018 - Acox1 protein_coding processed_transcript MGP_NODShiLtJ_T0033417.1 MGP_NODShiLtJ_G0019275.1 mouse_genomes_project 11 127942632 127953346 - Acox1 protein_coding processed_transcript MGP_NODShiLtJ_T0029996.1 MGP_NODShiLtJ_G0018436.1 mouse_genomes_project 11 76732367 76736989 - MGP_NODShiLtJ_P0029996 Gm21988 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030001.1 MGP_NODShiLtJ_G0018436.1 mouse_genomes_project 11 76732411 76736962 - MGP_NODShiLtJ_P0030001 Gm21988 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030334.1 MGP_NODShiLtJ_G0018510.1 mouse_genomes_project 11 80168252 80172733 + MGP_NODShiLtJ_P0030334 Olfr20 protein_coding protein_coding MGP_NODShiLtJ_T0033753.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132022145 132088114 + MGP_NODShiLtJ_P0033753 Baiap2 protein_coding protein_coding MGP_NODShiLtJ_T0033754.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132022145 132083953 + MGP_NODShiLtJ_P0033754 Baiap2 protein_coding protein_coding MGP_NODShiLtJ_T0033755.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132022145 132088114 + MGP_NODShiLtJ_P0033755 Baiap2 protein_coding protein_coding MGP_NODShiLtJ_T0033756.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132022145 132083953 + MGP_NODShiLtJ_P0033756 Baiap2 protein_coding protein_coding MGP_NODShiLtJ_T0033757.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132022145 132083953 + MGP_NODShiLtJ_P0033757 Baiap2 protein_coding protein_coding MGP_NODShiLtJ_T0033758.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132022473 132039899 + Baiap2 protein_coding processed_transcript MGP_NODShiLtJ_T0033759.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132022829 132062758 + Baiap2 protein_coding processed_transcript MGP_NODShiLtJ_T0033760.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132039387 132039754 + Baiap2 protein_coding processed_transcript MGP_NODShiLtJ_T0033761.1 MGP_NODShiLtJ_G0019344.1 mouse_genomes_project 11 132079010 132083531 + Baiap2 protein_coding processed_transcript MGP_NODShiLtJ_T0033865.1 MGP_NODShiLtJ_G0019365.1 mouse_genomes_project 11 132671614 132680332 - Fam195b protein_coding processed_transcript MGP_NODShiLtJ_T0033866.1 MGP_NODShiLtJ_G0019365.1 mouse_genomes_project 11 132671614 132680358 - MGP_NODShiLtJ_P0033866 Fam195b protein_coding protein_coding MGP_NODShiLtJ_T0003248.1 MGP_NODShiLtJ_G0002995.1 mouse_genomes_project 11 112087017 112092001 + Gm11551 antisense antisense MGP_NODShiLtJ_T0101270.1 MGP_NODShiLtJ_G0039548.1 mouse_genomes_project 11 56867399 56868996 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0006313.1 MGP_NODShiLtJ_G0005258.1 mouse_genomes_project 11 131175344 131180691 + Gm26888 lincRNA lincRNA MGP_NODShiLtJ_T0033230.1 MGP_NODShiLtJ_G0019247.1 mouse_genomes_project 11 127185674 127187070 - MGP_NODShiLtJ_P0033230 Nt5c protein_coding protein_coding MGP_NODShiLtJ_T0033231.1 MGP_NODShiLtJ_G0019247.1 mouse_genomes_project 11 127185674 127187117 - MGP_NODShiLtJ_P0033231 Nt5c protein_coding protein_coding MGP_NODShiLtJ_T0033232.1 MGP_NODShiLtJ_G0019247.1 mouse_genomes_project 11 127185892 127187106 - Nt5c protein_coding retained_intron MGP_NODShiLtJ_T0033233.1 MGP_NODShiLtJ_G0019247.1 mouse_genomes_project 11 127185954 127186457 - Nt5c protein_coding retained_intron MGP_NODShiLtJ_T0033234.1 MGP_NODShiLtJ_G0019247.1 mouse_genomes_project 11 127186025 127186626 - Nt5c protein_coding retained_intron MGP_NODShiLtJ_T0028811.1 MGP_NODShiLtJ_G0018148.1 mouse_genomes_project 11 58357668 58361370 - MGP_NODShiLtJ_P0028811 Sowaha protein_coding protein_coding MGP_NODShiLtJ_T0028576.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54327747 54372204 + MGP_NODShiLtJ_P0028576 Mapk9 protein_coding protein_coding MGP_NODShiLtJ_T0028577.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54327747 54372204 + MGP_NODShiLtJ_P0028577 Mapk9 protein_coding protein_coding MGP_NODShiLtJ_T0028578.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54327747 54372204 + MGP_NODShiLtJ_P0028578 Mapk9 protein_coding protein_coding MGP_NODShiLtJ_T0028579.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54327749 54372204 + MGP_NODShiLtJ_P0028579 Mapk9 protein_coding protein_coding MGP_NODShiLtJ_T0028580.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54327767 54359962 + Mapk9 protein_coding processed_transcript MGP_NODShiLtJ_T0028581.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54327889 54356565 + Mapk9 protein_coding processed_transcript MGP_NODShiLtJ_T0028582.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54336031 54372194 + MGP_NODShiLtJ_P0028582 Mapk9 protein_coding protein_coding MGP_NODShiLtJ_T0028583.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54336048 54357493 + Mapk9 protein_coding processed_transcript MGP_NODShiLtJ_T0028584.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54336075 54369093 + MGP_NODShiLtJ_P0028584 Mapk9 protein_coding protein_coding MGP_NODShiLtJ_T0028585.1 MGP_NODShiLtJ_G0018090.1 mouse_genomes_project 11 54336075 54369093 + MGP_NODShiLtJ_P0028585 Mapk9 protein_coding protein_coding MGP_NODShiLtJ_T0030708.1 MGP_NODShiLtJ_G0018608.1 mouse_genomes_project 11 85460944 85466531 + MGP_NODShiLtJ_P0030708 Dhrs13 protein_coding protein_coding MGP_NODShiLtJ_T0030709.1 MGP_NODShiLtJ_G0018608.1 mouse_genomes_project 11 85461013 85466456 + MGP_NODShiLtJ_P0030709 Dhrs13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030710.1 MGP_NODShiLtJ_G0018608.1 mouse_genomes_project 11 85461016 85466529 + MGP_NODShiLtJ_P0030710 Dhrs13 protein_coding protein_coding MGP_NODShiLtJ_T0030711.1 MGP_NODShiLtJ_G0018608.1 mouse_genomes_project 11 85461023 85462142 + MGP_NODShiLtJ_P0030711 Dhrs13 protein_coding protein_coding MGP_NODShiLtJ_T0098255.1 MGP_NODShiLtJ_G0036666.1 mouse_genomes_project 11 74555026 74556348 - Gm12305 sense_intronic sense_intronic MGP_NODShiLtJ_T0028255.1 MGP_NODShiLtJ_G0017991.1 mouse_genomes_project 11 34171317 34240550 + MGP_NODShiLtJ_P0028255 Ubtd2 protein_coding protein_coding MGP_NODShiLtJ_T0012444.1 MGP_NODShiLtJ_G0010552.1 mouse_genomes_project 11 37868464 37869200 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032608.1 MGP_NODShiLtJ_G0019101.1 mouse_genomes_project 11 113167771 113169334 + MGP_NODShiLtJ_P0032608 Fam187a protein_coding protein_coding MGP_NODShiLtJ_T0028296.1 MGP_NODShiLtJ_G0018006.1 mouse_genomes_project 11 36136058 36139828 - MGP_NODShiLtJ_P0028296 Foxi1 protein_coding protein_coding MGP_NODShiLtJ_T0003268.1 MGP_NODShiLtJ_G0003014.1 mouse_genomes_project 11 117722982 117725303 + antisense antisense MGP_NODShiLtJ_T0003269.1 MGP_NODShiLtJ_G0003014.1 mouse_genomes_project 11 117723087 117725308 + antisense antisense MGP_NODShiLtJ_T0033617.1 MGP_NODShiLtJ_G0019317.1 mouse_genomes_project 11 129927570 129973382 + MGP_NODShiLtJ_P0033617 Pgs1 protein_coding protein_coding MGP_NODShiLtJ_T0033618.1 MGP_NODShiLtJ_G0019317.1 mouse_genomes_project 11 129928163 129973382 + MGP_NODShiLtJ_P0033618 Pgs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033619.1 MGP_NODShiLtJ_G0019317.1 mouse_genomes_project 11 129946164 129973296 + MGP_NODShiLtJ_P0033619 Pgs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033620.1 MGP_NODShiLtJ_G0019317.1 mouse_genomes_project 11 129958735 129973382 + Pgs1 protein_coding retained_intron MGP_NODShiLtJ_T0030833.1 MGP_NODShiLtJ_G0018638.1 mouse_genomes_project 11 86217308 86218532 - MGP_NODShiLtJ_P0030833 Fam58b protein_coding protein_coding MGP_NODShiLtJ_T0012577.1 MGP_NODShiLtJ_G0010685.1 mouse_genomes_project 11 93104096 93104623 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028301.1 MGP_NODShiLtJ_G0018008.1 mouse_genomes_project 11 36248376 36360407 + MGP_NODShiLtJ_P0028301 Fam196b protein_coding protein_coding MGP_NODShiLtJ_T0028302.1 MGP_NODShiLtJ_G0018008.1 mouse_genomes_project 11 36248376 36360406 + MGP_NODShiLtJ_P0028302 Fam196b protein_coding protein_coding MGP_NODShiLtJ_T0029496.1 MGP_NODShiLtJ_G0018327.1 mouse_genomes_project 11 71759977 71876290 - MGP_NODShiLtJ_P0029496 Map2k4 protein_coding protein_coding MGP_NODShiLtJ_T0029497.1 MGP_NODShiLtJ_G0018327.1 mouse_genomes_project 11 71762067 71796542 - MGP_NODShiLtJ_P0029497 Map2k4 protein_coding protein_coding MGP_NODShiLtJ_T0029498.1 MGP_NODShiLtJ_G0018327.1 mouse_genomes_project 11 71763462 71768773 - Map2k4 protein_coding processed_transcript MGP_NODShiLtJ_T0029499.1 MGP_NODShiLtJ_G0018327.1 mouse_genomes_project 11 71768046 71876278 - MGP_NODShiLtJ_P0029499 Map2k4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029500.1 MGP_NODShiLtJ_G0018327.1 mouse_genomes_project 11 71789162 71876279 - MGP_NODShiLtJ_P0029500 Map2k4 protein_coding protein_coding MGP_NODShiLtJ_T0029501.1 MGP_NODShiLtJ_G0018327.1 mouse_genomes_project 11 71789163 71876278 - MGP_NODShiLtJ_P0029501 Map2k4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029502.1 MGP_NODShiLtJ_G0018327.1 mouse_genomes_project 11 71796477 71823638 - Map2k4 protein_coding processed_transcript MGP_NODShiLtJ_T0012599.1 MGP_NODShiLtJ_G0010707.1 mouse_genomes_project 11 104579779 104580188 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030672.1 MGP_NODShiLtJ_G0018604.1 mouse_genomes_project 11 85184531 85186826 - MGP_NODShiLtJ_P0030672 Gm10277 protein_coding protein_coding MGP_NODShiLtJ_T0030993.1 MGP_NODShiLtJ_G0018682.1 mouse_genomes_project 11 90648628 90658117 + MGP_NODShiLtJ_P0030993 Fndc8 protein_coding protein_coding MGP_NODShiLtJ_T0028589.1 MGP_NODShiLtJ_G0018092.1 mouse_genomes_project 11 54515684 54611360 + MGP_NODShiLtJ_P0028589 Rnf130 protein_coding protein_coding MGP_NODShiLtJ_T0028590.1 MGP_NODShiLtJ_G0018092.1 mouse_genomes_project 11 54599296 54611554 + Rnf130 protein_coding processed_transcript MGP_NODShiLtJ_T0012623.1 MGP_NODShiLtJ_G0010731.1 mouse_genomes_project 11 111606655 111606951 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031516.1 MGP_NODShiLtJ_G0018812.1 mouse_genomes_project 11 103838103 103842183 + MGP_NODShiLtJ_P0031516 Chad protein_coding protein_coding MGP_NODShiLtJ_T0032155.1 MGP_NODShiLtJ_G0019015.1 mouse_genomes_project 11 110638303 110646732 + MGP_NODShiLtJ_P0032155 Nkiras2 protein_coding protein_coding MGP_NODShiLtJ_T0032156.1 MGP_NODShiLtJ_G0019015.1 mouse_genomes_project 11 110639343 110646349 + MGP_NODShiLtJ_P0032156 Nkiras2 protein_coding protein_coding MGP_NODShiLtJ_T0032157.1 MGP_NODShiLtJ_G0019015.1 mouse_genomes_project 11 110641935 110647540 + MGP_NODShiLtJ_P0032157 Nkiras2 protein_coding protein_coding MGP_NODShiLtJ_T0032158.1 MGP_NODShiLtJ_G0019015.1 mouse_genomes_project 11 110641979 110644811 + Nkiras2 protein_coding processed_transcript MGP_NODShiLtJ_T0032159.1 MGP_NODShiLtJ_G0019015.1 mouse_genomes_project 11 110642007 110646519 + Nkiras2 protein_coding processed_transcript MGP_NODShiLtJ_T0032160.1 MGP_NODShiLtJ_G0019015.1 mouse_genomes_project 11 110642070 110646050 + MGP_NODShiLtJ_P0032160 Nkiras2 protein_coding protein_coding MGP_NODShiLtJ_T0029770.1 MGP_NODShiLtJ_G0018391.1 mouse_genomes_project 11 76062254 76063668 + MGP_NODShiLtJ_P0029770 Sox15 protein_coding protein_coding MGP_NODShiLtJ_T0027974.1 MGP_NODShiLtJ_G0017930.1 mouse_genomes_project 11 21321398 21341221 - MGP_NODShiLtJ_P0027974 Mdh1 protein_coding protein_coding MGP_NODShiLtJ_T0027975.1 MGP_NODShiLtJ_G0017930.1 mouse_genomes_project 11 21323101 21324341 - Mdh1 protein_coding processed_transcript MGP_NODShiLtJ_T0027976.1 MGP_NODShiLtJ_G0017930.1 mouse_genomes_project 11 21324133 21328821 - Mdh1 protein_coding processed_transcript MGP_NODShiLtJ_T0027977.1 MGP_NODShiLtJ_G0017930.1 mouse_genomes_project 11 21327507 21341395 - MGP_NODShiLtJ_P0027977 Mdh1 protein_coding protein_coding MGP_NODShiLtJ_T0006275.1 MGP_NODShiLtJ_G0005228.1 mouse_genomes_project 11 113145702 113369028 + Gm26668 lincRNA lincRNA MGP_NODShiLtJ_T0029347.1 MGP_NODShiLtJ_G0018294.1 mouse_genomes_project 11 67340266 67359171 + MGP_NODShiLtJ_P0029347 Grap protein_coding protein_coding MGP_NODShiLtJ_T0029348.1 MGP_NODShiLtJ_G0018294.1 mouse_genomes_project 11 67355433 67356268 + Grap protein_coding processed_transcript MGP_NODShiLtJ_T0029576.1 MGP_NODShiLtJ_G0018348.1 mouse_genomes_project 11 74488998 74674231 - MGP_NODShiLtJ_P0029576 Ntn1 protein_coding protein_coding MGP_NODShiLtJ_T0029577.1 MGP_NODShiLtJ_G0018348.1 mouse_genomes_project 11 74488998 74689525 - MGP_NODShiLtJ_P0029577 Ntn1 protein_coding protein_coding MGP_NODShiLtJ_T0029578.1 MGP_NODShiLtJ_G0018348.1 mouse_genomes_project 11 74673048 74674417 - MGP_NODShiLtJ_P0029578 Ntn1 protein_coding protein_coding MGP_NODShiLtJ_T0012366.1 MGP_NODShiLtJ_G0010474.1 mouse_genomes_project 11 12630208 12630587 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098716.1 MGP_NODShiLtJ_G0037110.1 mouse_genomes_project 11 97530374 97530478 - Gm22534 snRNA snRNA MGP_NODShiLtJ_T0012410.1 MGP_NODShiLtJ_G0010518.1 mouse_genomes_project 11 27273127 27273596 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099917.1 MGP_NODShiLtJ_G0038311.1 mouse_genomes_project 11 36665804 36665932 - Gm22022 snoRNA snoRNA MGP_NODShiLtJ_T0030745.1 MGP_NODShiLtJ_G0018616.1 mouse_genomes_project 11 85625737 85629160 + MGP_NODShiLtJ_P0030745 Rab34 protein_coding protein_coding MGP_NODShiLtJ_T0030746.1 MGP_NODShiLtJ_G0018616.1 mouse_genomes_project 11 85626176 85629507 + MGP_NODShiLtJ_P0030746 Rab34 protein_coding protein_coding MGP_NODShiLtJ_T0030747.1 MGP_NODShiLtJ_G0018616.1 mouse_genomes_project 11 85626537 85627604 + Rab34 protein_coding retained_intron MGP_NODShiLtJ_T0030748.1 MGP_NODShiLtJ_G0018616.1 mouse_genomes_project 11 85626634 85629518 + MGP_NODShiLtJ_P0030748 Rab34 protein_coding protein_coding MGP_NODShiLtJ_T0030749.1 MGP_NODShiLtJ_G0018616.1 mouse_genomes_project 11 85626885 85628436 + Rab34 protein_coding retained_intron MGP_NODShiLtJ_T0030750.1 MGP_NODShiLtJ_G0018616.1 mouse_genomes_project 11 85627650 85628231 + Rab34 protein_coding retained_intron MGP_NODShiLtJ_T0031869.1 MGP_NODShiLtJ_G0018902.1 mouse_genomes_project 11 107924324 107978838 + MGP_NODShiLtJ_P0031869 Cdk12 protein_coding protein_coding MGP_NODShiLtJ_T0031870.1 MGP_NODShiLtJ_G0018902.1 mouse_genomes_project 11 107924579 107971410 + MGP_NODShiLtJ_P0031870 Cdk12 protein_coding protein_coding MGP_NODShiLtJ_T0031871.1 MGP_NODShiLtJ_G0018902.1 mouse_genomes_project 11 107924600 107978321 + MGP_NODShiLtJ_P0031871 Cdk12 protein_coding protein_coding MGP_NODShiLtJ_T0031872.1 MGP_NODShiLtJ_G0018902.1 mouse_genomes_project 11 107942955 107948713 + Cdk12 protein_coding processed_transcript MGP_NODShiLtJ_T0031873.1 MGP_NODShiLtJ_G0018902.1 mouse_genomes_project 11 107966395 108005577 + Cdk12 protein_coding processed_transcript MGP_NODShiLtJ_T0031874.1 MGP_NODShiLtJ_G0018902.1 mouse_genomes_project 11 107990770 107995281 + Cdk12 protein_coding processed_transcript MGP_NODShiLtJ_T0028260.1 MGP_NODShiLtJ_G0017994.1 mouse_genomes_project 11 34390043 34502735 + MGP_NODShiLtJ_P0028260 Fbxw11 protein_coding protein_coding MGP_NODShiLtJ_T0028261.1 MGP_NODShiLtJ_G0017994.1 mouse_genomes_project 11 34390103 34401493 + Fbxw11 protein_coding processed_transcript MGP_NODShiLtJ_T0028262.1 MGP_NODShiLtJ_G0017994.1 mouse_genomes_project 11 34390185 34502955 + MGP_NODShiLtJ_P0028262 Fbxw11 protein_coding protein_coding MGP_NODShiLtJ_T0028263.1 MGP_NODShiLtJ_G0017994.1 mouse_genomes_project 11 34390194 34502982 + MGP_NODShiLtJ_P0028263 Fbxw11 protein_coding protein_coding MGP_NODShiLtJ_T0028264.1 MGP_NODShiLtJ_G0017994.1 mouse_genomes_project 11 34390223 34477963 + MGP_NODShiLtJ_P0028264 Fbxw11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031557.1 MGP_NODShiLtJ_G0018825.1 mouse_genomes_project 11 104423259 104438377 - MGP_NODShiLtJ_P0031557 Pdk2 protein_coding protein_coding MGP_NODShiLtJ_T0031558.1 MGP_NODShiLtJ_G0018825.1 mouse_genomes_project 11 104423955 104425578 - Pdk2 protein_coding processed_transcript MGP_NODShiLtJ_T0031559.1 MGP_NODShiLtJ_G0018825.1 mouse_genomes_project 11 104425729 104426426 - Pdk2 protein_coding processed_transcript MGP_NODShiLtJ_T0031560.1 MGP_NODShiLtJ_G0018825.1 mouse_genomes_project 11 104426655 104437581 - Pdk2 protein_coding processed_transcript MGP_NODShiLtJ_T0031561.1 MGP_NODShiLtJ_G0018825.1 mouse_genomes_project 11 104428916 104437898 - Pdk2 protein_coding processed_transcript MGP_NODShiLtJ_T0097747.1 MGP_NODShiLtJ_G0036159.1 mouse_genomes_project 11 80193042 80193992 - pseudogene pseudogene MGP_NODShiLtJ_T0012340.1 MGP_NODShiLtJ_G0010448.1 mouse_genomes_project 11 765655 766468 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003177.1 MGP_NODShiLtJ_G0002941.1 mouse_genomes_project 11 85458676 85461330 - Dhrs13os antisense antisense MGP_NODShiLtJ_T0032895.1 MGP_NODShiLtJ_G0019168.1 mouse_genomes_project 11 117501718 117609984 - MGP_NODShiLtJ_P0032895 Smurf2 protein_coding protein_coding MGP_NODShiLtJ_T0032896.1 MGP_NODShiLtJ_G0019168.1 mouse_genomes_project 11 117503677 117609544 - Smurf2 protein_coding processed_transcript MGP_NODShiLtJ_T0032897.1 MGP_NODShiLtJ_G0019168.1 mouse_genomes_project 11 117503677 117609739 - MGP_NODShiLtJ_P0032897 Smurf2 protein_coding protein_coding MGP_NODShiLtJ_T0032898.1 MGP_NODShiLtJ_G0019168.1 mouse_genomes_project 11 117504265 117609628 - MGP_NODShiLtJ_P0032898 Smurf2 protein_coding protein_coding MGP_NODShiLtJ_T0032899.1 MGP_NODShiLtJ_G0019168.1 mouse_genomes_project 11 117507004 117511293 - Smurf2 protein_coding processed_transcript MGP_NODShiLtJ_T0032900.1 MGP_NODShiLtJ_G0019168.1 mouse_genomes_project 11 117512874 117521581 - Smurf2 protein_coding processed_transcript MGP_NODShiLtJ_T0029527.1 MGP_NODShiLtJ_G0018335.1 mouse_genomes_project 11 73266261 73292687 + MGP_NODShiLtJ_P0029527 Myh3 protein_coding protein_coding MGP_NODShiLtJ_T0029528.1 MGP_NODShiLtJ_G0018335.1 mouse_genomes_project 11 73266261 73292687 + MGP_NODShiLtJ_P0029528 Myh3 protein_coding protein_coding MGP_NODShiLtJ_T0029529.1 MGP_NODShiLtJ_G0018335.1 mouse_genomes_project 11 73266261 73292682 + MGP_NODShiLtJ_P0029529 Myh3 protein_coding protein_coding MGP_NODShiLtJ_T0032979.1 MGP_NODShiLtJ_G0019185.1 mouse_genomes_project 11 120295471 120335729 + MGP_NODShiLtJ_P0032979 Gna13 protein_coding protein_coding MGP_NODShiLtJ_T0032980.1 MGP_NODShiLtJ_G0019185.1 mouse_genomes_project 11 120295471 120315065 + MGP_NODShiLtJ_P0032980 Gna13 protein_coding protein_coding MGP_NODShiLtJ_T0101573.1 MGP_NODShiLtJ_G0039743.1 mouse_genomes_project 11 109917270 109917510 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012588.1 MGP_NODShiLtJ_G0010696.1 mouse_genomes_project 11 96262155 96262567 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029511.1 MGP_NODShiLtJ_G0018330.1 mouse_genomes_project 11 72334248 72680116 - MGP_NODShiLtJ_P0029511 Shisa6 protein_coding protein_coding MGP_NODShiLtJ_T0029512.1 MGP_NODShiLtJ_G0018330.1 mouse_genomes_project 11 72334248 72680116 - MGP_NODShiLtJ_P0029512 Shisa6 protein_coding protein_coding MGP_NODShiLtJ_T0029513.1 MGP_NODShiLtJ_G0018330.1 mouse_genomes_project 11 72517350 72657004 - Shisa6 protein_coding processed_transcript MGP_NODShiLtJ_T0029270.1 MGP_NODShiLtJ_G0018282.1 mouse_genomes_project 11 66662637 66717419 + MGP_NODShiLtJ_P0029270 Kcnj12 protein_coding protein_coding MGP_NODShiLtJ_T0029271.1 MGP_NODShiLtJ_G0018282.1 mouse_genomes_project 11 66712090 66717419 + MGP_NODShiLtJ_P0029271 Kcnj12 protein_coding protein_coding MGP_NODShiLtJ_T0029272.1 MGP_NODShiLtJ_G0018282.1 mouse_genomes_project 11 66712090 66717415 + MGP_NODShiLtJ_P0029272 Kcnj12 protein_coding protein_coding MGP_NODShiLtJ_T0033806.1 MGP_NODShiLtJ_G0019353.1 mouse_genomes_project 11 132470574 132477209 + MGP_NODShiLtJ_P0033806 Fscn2 protein_coding protein_coding MGP_NODShiLtJ_T0033807.1 MGP_NODShiLtJ_G0019353.1 mouse_genomes_project 11 132475582 132476989 + Fscn2 protein_coding processed_transcript MGP_NODShiLtJ_T0033808.1 MGP_NODShiLtJ_G0019353.1 mouse_genomes_project 11 132475753 132476861 + Fscn2 protein_coding processed_transcript MGP_NODShiLtJ_T0009676.1 MGP_NODShiLtJ_G0007809.1 mouse_genomes_project 11 128939555 128939632 + Gm24323 miRNA miRNA MGP_NODShiLtJ_T0029557.1 MGP_NODShiLtJ_G0018344.1 mouse_genomes_project 11 74049062 74051686 + Dhrs7c protein_coding processed_transcript MGP_NODShiLtJ_T0029558.1 MGP_NODShiLtJ_G0018344.1 mouse_genomes_project 11 74049146 74052054 + Dhrs7c protein_coding processed_transcript MGP_NODShiLtJ_T0029559.1 MGP_NODShiLtJ_G0018344.1 mouse_genomes_project 11 74049151 74052215 + Dhrs7c protein_coding processed_transcript MGP_NODShiLtJ_T0029560.1 MGP_NODShiLtJ_G0018344.1 mouse_genomes_project 11 74049152 74049942 + Dhrs7c protein_coding processed_transcript MGP_NODShiLtJ_T0029561.1 MGP_NODShiLtJ_G0018344.1 mouse_genomes_project 11 74049162 74067150 + MGP_NODShiLtJ_P0029561 Dhrs7c protein_coding protein_coding MGP_NODShiLtJ_T0028285.1 MGP_NODShiLtJ_G0018002.1 mouse_genomes_project 11 35493639 35523557 + MGP_NODShiLtJ_P0028285 D130052B06Rik protein_coding protein_coding MGP_NODShiLtJ_T0032938.1 MGP_NODShiLtJ_G0019178.1 mouse_genomes_project 11 118745378 119180835 - MGP_NODShiLtJ_P0032938 Prkca protein_coding protein_coding MGP_NODShiLtJ_T0032939.1 MGP_NODShiLtJ_G0019178.1 mouse_genomes_project 11 118750193 118793574 - MGP_NODShiLtJ_P0032939 Prkca protein_coding protein_coding MGP_NODShiLtJ_T0032940.1 MGP_NODShiLtJ_G0019178.1 mouse_genomes_project 11 118750259 119180574 - MGP_NODShiLtJ_P0032940 Prkca protein_coding unknown_likely_coding MGP_NODShiLtJ_T0032941.1 MGP_NODShiLtJ_G0019178.1 mouse_genomes_project 11 118792309 118833396 - Prkca protein_coding processed_transcript MGP_NODShiLtJ_T0032942.1 MGP_NODShiLtJ_G0019178.1 mouse_genomes_project 11 119023517 119180555 - Prkca protein_coding processed_transcript MGP_NODShiLtJ_T0028944.1 MGP_NODShiLtJ_G0018177.1 mouse_genomes_project 11 60089256 60119682 - MGP_NODShiLtJ_P0028944 Ccdc69 protein_coding protein_coding MGP_NODShiLtJ_T0028945.1 MGP_NODShiLtJ_G0018177.1 mouse_genomes_project 11 60090256 60119706 - MGP_NODShiLtJ_P0028945 Ccdc69 protein_coding protein_coding MGP_NODShiLtJ_T0012662.1 MGP_NODShiLtJ_G0010770.1 mouse_genomes_project 11 128283302 128283605 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012433.1 MGP_NODShiLtJ_G0010541.1 mouse_genomes_project 11 32594314 32594918 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003212.1 MGP_NODShiLtJ_G0002967.1 mouse_genomes_project 11 104546663 104560711 + Dlx4os antisense antisense MGP_NODShiLtJ_T0031453.1 MGP_NODShiLtJ_G0018800.1 mouse_genomes_project 11 103440446 103447204 + MGP_NODShiLtJ_P0031453 Tob1 protein_coding protein_coding MGP_NODShiLtJ_T0098261.1 MGP_NODShiLtJ_G0036671.1 mouse_genomes_project 11 118244395 118245582 + Gm11722 sense_intronic sense_intronic MGP_NODShiLtJ_T0003216.1 MGP_NODShiLtJ_G0002971.1 mouse_genomes_project 11 105148933 105162508 - Zfp652os antisense antisense MGP_NODShiLtJ_T0029852.1 MGP_NODShiLtJ_G0018411.1 mouse_genomes_project 11 76333450 76334785 - MGP_NODShiLtJ_P0029852 Tmem95 protein_coding protein_coding MGP_NODShiLtJ_T0032742.1 MGP_NODShiLtJ_G0019133.1 mouse_genomes_project 11 115542596 115572095 + MGP_NODShiLtJ_P0032742 Efcab3 protein_coding protein_coding MGP_NODShiLtJ_T0032743.1 MGP_NODShiLtJ_G0019133.1 mouse_genomes_project 11 115545842 115589428 + MGP_NODShiLtJ_P0032743 Efcab3 protein_coding protein_coding MGP_NODShiLtJ_T0032744.1 MGP_NODShiLtJ_G0019133.1 mouse_genomes_project 11 115575229 115602150 + MGP_NODShiLtJ_P0032744 Efcab3 protein_coding protein_coding MGP_NODShiLtJ_T0032745.1 MGP_NODShiLtJ_G0019133.1 mouse_genomes_project 11 115595639 115602148 + Efcab3 protein_coding processed_transcript MGP_NODShiLtJ_T0031026.1 MGP_NODShiLtJ_G0018694.1 mouse_genomes_project 11 91156034 91192630 + MGP_NODShiLtJ_P0031026 Ap2b1 protein_coding protein_coding MGP_NODShiLtJ_T0031027.1 MGP_NODShiLtJ_G0018694.1 mouse_genomes_project 11 91159493 91267761 + MGP_NODShiLtJ_P0031027 Ap2b1 protein_coding protein_coding MGP_NODShiLtJ_T0031028.1 MGP_NODShiLtJ_G0018694.1 mouse_genomes_project 11 91159713 91204151 + Ap2b1 protein_coding retained_intron MGP_NODShiLtJ_T0031029.1 MGP_NODShiLtJ_G0018694.1 mouse_genomes_project 11 91159744 91261323 + MGP_NODShiLtJ_P0031029 Ap2b1 protein_coding protein_coding MGP_NODShiLtJ_T0031030.1 MGP_NODShiLtJ_G0018694.1 mouse_genomes_project 11 91159784 91265738 + MGP_NODShiLtJ_P0031030 Ap2b1 protein_coding protein_coding MGP_NODShiLtJ_T0031031.1 MGP_NODShiLtJ_G0018694.1 mouse_genomes_project 11 91159962 91175145 + MGP_NODShiLtJ_P0031031 Ap2b1 protein_coding protein_coding MGP_NODShiLtJ_T0031032.1 MGP_NODShiLtJ_G0018694.1 mouse_genomes_project 11 91165248 91265370 + MGP_NODShiLtJ_P0031032 Ap2b1 protein_coding protein_coding MGP_NODShiLtJ_T0031770.1 MGP_NODShiLtJ_G0018879.1 mouse_genomes_project 11 106958039 106977692 - MGP_NODShiLtJ_P0031770 Gpr179 protein_coding protein_coding MGP_NODShiLtJ_T0031771.1 MGP_NODShiLtJ_G0018879.1 mouse_genomes_project 11 106975075 106977753 - Gpr179 protein_coding retained_intron MGP_NODShiLtJ_T0033369.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127811197 127826747 - MGP_NODShiLtJ_P0033369 Unc13d protein_coding protein_coding MGP_NODShiLtJ_T0033370.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127811198 127826958 - MGP_NODShiLtJ_P0033370 Unc13d protein_coding protein_coding MGP_NODShiLtJ_T0033371.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127811198 127826958 - MGP_NODShiLtJ_P0033371 Unc13d protein_coding protein_coding MGP_NODShiLtJ_T0033372.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127811656 127826621 - MGP_NODShiLtJ_P0033372 Unc13d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033373.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127811740 127826587 - MGP_NODShiLtJ_P0033373 Unc13d protein_coding protein_coding MGP_NODShiLtJ_T0033374.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127817897 127819458 - Unc13d protein_coding retained_intron MGP_NODShiLtJ_T0033375.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127824473 127826958 - Unc13d protein_coding processed_transcript MGP_NODShiLtJ_T0033376.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127825104 127826048 - MGP_NODShiLtJ_P0033376 Unc13d protein_coding protein_coding MGP_NODShiLtJ_T0033377.1 MGP_NODShiLtJ_G0019269.1 mouse_genomes_project 11 127825467 127826938 - MGP_NODShiLtJ_P0033377 Unc13d protein_coding protein_coding MGP_NODShiLtJ_T0098175.1 MGP_NODShiLtJ_G0036587.1 mouse_genomes_project 11 19154918 19155062 - Gm23386 scaRNA scaRNA MGP_NODShiLtJ_T0032097.1 MGP_NODShiLtJ_G0019004.1 mouse_genomes_project 11 110347513 110356698 - MGP_NODShiLtJ_P0032097 Hap1 protein_coding protein_coding MGP_NODShiLtJ_T0032098.1 MGP_NODShiLtJ_G0019004.1 mouse_genomes_project 11 110349045 110356657 - MGP_NODShiLtJ_P0032098 Hap1 protein_coding protein_coding MGP_NODShiLtJ_T0032099.1 MGP_NODShiLtJ_G0019004.1 mouse_genomes_project 11 110349484 110354610 - MGP_NODShiLtJ_P0032099 Hap1 protein_coding protein_coding MGP_NODShiLtJ_T0032100.1 MGP_NODShiLtJ_G0019004.1 mouse_genomes_project 11 110349604 110352475 - MGP_NODShiLtJ_P0032100 Hap1 protein_coding protein_coding MGP_NODShiLtJ_T0032101.1 MGP_NODShiLtJ_G0019004.1 mouse_genomes_project 11 110352825 110355953 - MGP_NODShiLtJ_P0032101 Hap1 protein_coding protein_coding MGP_NODShiLtJ_T0009623.1 MGP_NODShiLtJ_G0007756.1 mouse_genomes_project 11 82614442 82614537 + Mir22 miRNA miRNA MGP_NODShiLtJ_T0030600.1 MGP_NODShiLtJ_G0018589.1 mouse_genomes_project 11 84220784 84221814 + Blmh protein_coding retained_intron MGP_NODShiLtJ_T0030601.1 MGP_NODShiLtJ_G0018589.1 mouse_genomes_project 11 84220794 84244350 + Blmh protein_coding retained_intron MGP_NODShiLtJ_T0030602.1 MGP_NODShiLtJ_G0018589.1 mouse_genomes_project 11 84220876 84243367 + MGP_NODShiLtJ_P0030602 Blmh protein_coding protein_coding MGP_NODShiLtJ_T0030603.1 MGP_NODShiLtJ_G0018589.1 mouse_genomes_project 11 84220906 84265015 + MGP_NODShiLtJ_P0030603 Blmh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030604.1 MGP_NODShiLtJ_G0018589.1 mouse_genomes_project 11 84220936 84265570 + MGP_NODShiLtJ_P0030604 Blmh protein_coding protein_coding MGP_NODShiLtJ_T0030605.1 MGP_NODShiLtJ_G0018589.1 mouse_genomes_project 11 84221102 84229636 + MGP_NODShiLtJ_P0030605 Blmh protein_coding protein_coding MGP_NODShiLtJ_T0030606.1 MGP_NODShiLtJ_G0018589.1 mouse_genomes_project 11 84221123 84227586 + MGP_NODShiLtJ_P0030606 Blmh protein_coding protein_coding MGP_NODShiLtJ_T0030607.1 MGP_NODShiLtJ_G0018589.1 mouse_genomes_project 11 84236577 84242404 + Blmh protein_coding processed_transcript MGP_NODShiLtJ_T0098700.1 MGP_NODShiLtJ_G0037094.1 mouse_genomes_project 11 86308940 86309027 + Gm23219 snRNA snRNA MGP_NODShiLtJ_T0003200.1 MGP_NODShiLtJ_G0002959.1 mouse_genomes_project 11 95302512 95308804 - Gm11491 antisense antisense MGP_NODShiLtJ_T0003201.1 MGP_NODShiLtJ_G0002959.1 mouse_genomes_project 11 95302730 95308857 - Gm11491 antisense antisense MGP_NODShiLtJ_T0027811.1 MGP_NODShiLtJ_G0017892.1 mouse_genomes_project 11 5895095 6145504 - MGP_NODShiLtJ_P0027811 Tns3 protein_coding protein_coding MGP_NODShiLtJ_T0027812.1 MGP_NODShiLtJ_G0017892.1 mouse_genomes_project 11 5914401 5934083 - Tns3 protein_coding processed_transcript MGP_NODShiLtJ_T0027813.1 MGP_NODShiLtJ_G0017892.1 mouse_genomes_project 11 6006290 6013828 - Tns3 protein_coding processed_transcript MGP_NODShiLtJ_T0027814.1 MGP_NODShiLtJ_G0017892.1 mouse_genomes_project 11 6014141 6047157 - Tns3 protein_coding processed_transcript MGP_NODShiLtJ_T0032835.1 MGP_NODShiLtJ_G0019155.1 mouse_genomes_project 11 116900584 116914059 + MGP_NODShiLtJ_P0032835 Tcam1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032836.1 MGP_NODShiLtJ_G0019155.1 mouse_genomes_project 11 116900660 116914671 + MGP_NODShiLtJ_P0032836 Tcam1 protein_coding protein_coding MGP_NODShiLtJ_T0003128.1 MGP_NODShiLtJ_G0002901.1 mouse_genomes_project 11 64462141 64466050 + Gm10435 antisense antisense MGP_NODShiLtJ_T0003129.1 MGP_NODShiLtJ_G0002901.1 mouse_genomes_project 11 64462141 64466050 + Gm10435 antisense antisense MGP_NODShiLtJ_T0012611.1 MGP_NODShiLtJ_G0010719.1 mouse_genomes_project 11 107663630 107664074 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030572.1 MGP_NODShiLtJ_G0018582.1 mouse_genomes_project 11 83639327 83649056 + MGP_NODShiLtJ_P0030572 Timm22 protein_coding protein_coding MGP_NODShiLtJ_T0030573.1 MGP_NODShiLtJ_G0018582.1 mouse_genomes_project 11 83639518 83651019 + MGP_NODShiLtJ_P0030573 Timm22 protein_coding protein_coding MGP_NODShiLtJ_T0030574.1 MGP_NODShiLtJ_G0018582.1 mouse_genomes_project 11 83639566 83647485 + MGP_NODShiLtJ_P0030574 Timm22 protein_coding protein_coding MGP_NODShiLtJ_T0030575.1 MGP_NODShiLtJ_G0018582.1 mouse_genomes_project 11 83639580 83643173 + MGP_NODShiLtJ_P0030575 Timm22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031383.1 MGP_NODShiLtJ_G0018785.1 mouse_genomes_project 11 98479125 98502374 - MGP_NODShiLtJ_P0031383 Pctp protein_coding protein_coding MGP_NODShiLtJ_T0032545.1 MGP_NODShiLtJ_G0019089.1 mouse_genomes_project 11 112686539 112702157 - MGP_NODShiLtJ_P0032545 Fam171a2 protein_coding protein_coding MGP_NODShiLtJ_T0032546.1 MGP_NODShiLtJ_G0019089.1 mouse_genomes_project 11 112688306 112689336 - Fam171a2 protein_coding processed_transcript MGP_NODShiLtJ_T0032547.1 MGP_NODShiLtJ_G0019089.1 mouse_genomes_project 11 112689791 112702069 - Fam171a2 protein_coding processed_transcript MGP_NODShiLtJ_T0009665.1 MGP_NODShiLtJ_G0007798.1 mouse_genomes_project 11 114815186 114815331 - miRNA miRNA MGP_NODShiLtJ_T0030350.1 MGP_NODShiLtJ_G0018520.1 mouse_genomes_project 11 80675156 80679681 - MGP_NODShiLtJ_P0030350 Olfr389 protein_coding protein_coding MGP_NODShiLtJ_T0030351.1 MGP_NODShiLtJ_G0018520.1 mouse_genomes_project 11 80675422 80679627 - MGP_NODShiLtJ_P0030351 Olfr389 protein_coding protein_coding MGP_NODShiLtJ_T0098728.1 MGP_NODShiLtJ_G0037122.1 mouse_genomes_project 11 111795233 111795424 + Gm23849 snRNA snRNA MGP_NODShiLtJ_T0031119.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92819558 92859161 - MGP_NODShiLtJ_P0031119 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031120.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92819558 92859110 - MGP_NODShiLtJ_P0031120 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031121.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92819558 92859189 - MGP_NODShiLtJ_P0031121 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031122.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92820003 92858020 - MGP_NODShiLtJ_P0031122 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031123.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92820058 92859018 - MGP_NODShiLtJ_P0031123 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031124.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92820169 92859112 - MGP_NODShiLtJ_P0031124 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031125.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92821333 92824777 - MGP_NODShiLtJ_P0031125 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031126.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92821709 92859097 - MGP_NODShiLtJ_P0031126 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031127.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92824729 92826293 - Ggnbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0031128.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92840615 92846682 - Ggnbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0031129.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92842157 92848847 - Ggnbp2 protein_coding retained_intron MGP_NODShiLtJ_T0031130.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92848906 92858863 - MGP_NODShiLtJ_P0031130 Ggnbp2 protein_coding protein_coding MGP_NODShiLtJ_T0031131.1 MGP_NODShiLtJ_G0018722.1 mouse_genomes_project 11 92856697 92859151 - Ggnbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0003320.1 MGP_NODShiLtJ_G0003053.1 mouse_genomes_project 11 133140796 133141717 + Gm28192 antisense antisense MGP_NODShiLtJ_T0027984.1 MGP_NODShiLtJ_G0017932.1 mouse_genomes_project 11 21834551 21841387 - MGP_NODShiLtJ_P0027984 Otx1 protein_coding protein_coding MGP_NODShiLtJ_T0027985.1 MGP_NODShiLtJ_G0017932.1 mouse_genomes_project 11 21834556 21841482 - Otx1 protein_coding retained_intron MGP_NODShiLtJ_T0027986.1 MGP_NODShiLtJ_G0017932.1 mouse_genomes_project 11 21836625 21842654 - MGP_NODShiLtJ_P0027986 Otx1 protein_coding protein_coding MGP_NODShiLtJ_T0033611.1 MGP_NODShiLtJ_G0019315.1 mouse_genomes_project 11 129797543 129803072 - Tha1 protein_coding processed_transcript MGP_NODShiLtJ_T0033612.1 MGP_NODShiLtJ_G0019315.1 mouse_genomes_project 11 129797543 129803050 - MGP_NODShiLtJ_P0033612 Tha1 protein_coding protein_coding MGP_NODShiLtJ_T0033613.1 MGP_NODShiLtJ_G0019315.1 mouse_genomes_project 11 129799317 129801505 - Tha1 protein_coding processed_transcript MGP_NODShiLtJ_T0027761.1 MGP_NODShiLtJ_G0017879.1 mouse_genomes_project 11 3588927 3593198 + MGP_NODShiLtJ_P0027761 Ppia protein_coding protein_coding MGP_NODShiLtJ_T0027762.1 MGP_NODShiLtJ_G0017879.1 mouse_genomes_project 11 3589352 3591923 + Ppia protein_coding retained_intron MGP_NODShiLtJ_T0027763.1 MGP_NODShiLtJ_G0017879.1 mouse_genomes_project 11 3589354 3593196 + Ppia protein_coding processed_transcript MGP_NODShiLtJ_T0027764.1 MGP_NODShiLtJ_G0017879.1 mouse_genomes_project 11 3589360 3593094 + Ppia protein_coding retained_intron MGP_NODShiLtJ_T0027765.1 MGP_NODShiLtJ_G0017879.1 mouse_genomes_project 11 3589360 3593193 + Ppia protein_coding retained_intron MGP_NODShiLtJ_T0009601.1 MGP_NODShiLtJ_G0007734.1 mouse_genomes_project 11 73288240 73288312 + Mir6923 miRNA miRNA MGP_NODShiLtJ_T0029071.1 MGP_NODShiLtJ_G0018234.1 mouse_genomes_project 11 64406245 64406859 + MGP_NODShiLtJ_P0029071 Hist3h2ba protein_coding protein_coding MGP_NODShiLtJ_T0031325.1 MGP_NODShiLtJ_G0018766.1 mouse_genomes_project 11 96177502 96178559 - MGP_NODShiLtJ_P0031325 protein_coding protein_coding MGP_NODShiLtJ_T0003093.1 MGP_NODShiLtJ_G0002868.1 mouse_genomes_project 11 38159365 38161302 + Gm12127 antisense antisense MGP_NODShiLtJ_T0032295.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111378502 111392875 - Becn1 protein_coding retained_intron MGP_NODShiLtJ_T0032296.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111378502 111392883 - Becn1 protein_coding retained_intron MGP_NODShiLtJ_T0032297.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111378502 111392909 - MGP_NODShiLtJ_P0032297 Becn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032298.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111379053 111392896 - MGP_NODShiLtJ_P0032298 Becn1 protein_coding protein_coding MGP_NODShiLtJ_T0032299.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111379116 111392860 - MGP_NODShiLtJ_P0032299 Becn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032300.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111379128 111384650 - Becn1 protein_coding retained_intron MGP_NODShiLtJ_T0032301.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111380319 111383111 - Becn1 protein_coding processed_transcript MGP_NODShiLtJ_T0032302.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111380923 111392360 - MGP_NODShiLtJ_P0032302 Becn1 protein_coding protein_coding MGP_NODShiLtJ_T0032303.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111381834 111386923 - MGP_NODShiLtJ_P0032303 Becn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032304.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111381950 111392861 - MGP_NODShiLtJ_P0032304 Becn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032305.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111381981 111386051 - Becn1 protein_coding retained_intron MGP_NODShiLtJ_T0032306.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111386161 111392829 - MGP_NODShiLtJ_P0032306 Becn1 protein_coding protein_coding MGP_NODShiLtJ_T0032307.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111386521 111392872 - MGP_NODShiLtJ_P0032307 Becn1 protein_coding protein_coding MGP_NODShiLtJ_T0032308.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111386841 111392863 - Becn1 protein_coding retained_intron MGP_NODShiLtJ_T0032309.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111388703 111392878 - Becn1 protein_coding processed_transcript MGP_NODShiLtJ_T0032310.1 MGP_NODShiLtJ_G0019046.1 mouse_genomes_project 11 111392087 111392864 - Becn1 protein_coding retained_intron MGP_NODShiLtJ_T0031746.1 MGP_NODShiLtJ_G0018876.1 mouse_genomes_project 11 106764716 106766429 - Kpnb1 protein_coding retained_intron MGP_NODShiLtJ_T0031747.1 MGP_NODShiLtJ_G0018876.1 mouse_genomes_project 11 106764860 106793798 - MGP_NODShiLtJ_P0031747 Kpnb1 protein_coding protein_coding MGP_NODShiLtJ_T0031748.1 MGP_NODShiLtJ_G0018876.1 mouse_genomes_project 11 106766427 106767607 - Kpnb1 protein_coding retained_intron MGP_NODShiLtJ_T0028735.1 MGP_NODShiLtJ_G0018128.1 mouse_genomes_project 11 56501070 56547143 - MGP_NODShiLtJ_P0028735 Jade2 protein_coding protein_coding MGP_NODShiLtJ_T0028736.1 MGP_NODShiLtJ_G0018128.1 mouse_genomes_project 11 56501070 56547143 - MGP_NODShiLtJ_P0028736 Jade2 protein_coding protein_coding MGP_NODShiLtJ_T0028737.1 MGP_NODShiLtJ_G0018128.1 mouse_genomes_project 11 56501075 56546886 - MGP_NODShiLtJ_P0028737 Jade2 protein_coding protein_coding MGP_NODShiLtJ_T0028738.1 MGP_NODShiLtJ_G0018128.1 mouse_genomes_project 11 56530536 56544989 - Jade2 protein_coding processed_transcript MGP_NODShiLtJ_T0009677.1 MGP_NODShiLtJ_G0007810.1 mouse_genomes_project 11 129947637 129947718 + Mir6933 miRNA miRNA MGP_NODShiLtJ_T0012615.1 MGP_NODShiLtJ_G0010723.1 mouse_genomes_project 11 109562117 109565131 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028602.1 MGP_NODShiLtJ_G0018095.1 mouse_genomes_project 11 54713176 54725898 - MGP_NODShiLtJ_P0028602 Sqstm1 protein_coding protein_coding MGP_NODShiLtJ_T0028603.1 MGP_NODShiLtJ_G0018095.1 mouse_genomes_project 11 54713962 54725934 - MGP_NODShiLtJ_P0028603 Sqstm1 protein_coding protein_coding MGP_NODShiLtJ_T0028604.1 MGP_NODShiLtJ_G0018095.1 mouse_genomes_project 11 54713977 54716765 - MGP_NODShiLtJ_P0028604 Sqstm1 protein_coding protein_coding MGP_NODShiLtJ_T0028605.1 MGP_NODShiLtJ_G0018095.1 mouse_genomes_project 11 54714421 54725872 - MGP_NODShiLtJ_P0028605 Sqstm1 protein_coding protein_coding MGP_NODShiLtJ_T0028606.1 MGP_NODShiLtJ_G0018095.1 mouse_genomes_project 11 54716122 54719907 - Sqstm1 protein_coding retained_intron MGP_NODShiLtJ_T0028607.1 MGP_NODShiLtJ_G0018095.1 mouse_genomes_project 11 54716253 54716929 - Sqstm1 protein_coding retained_intron MGP_NODShiLtJ_T0028608.1 MGP_NODShiLtJ_G0018095.1 mouse_genomes_project 11 54719485 54721126 - Sqstm1 protein_coding retained_intron MGP_NODShiLtJ_T0034047.1 MGP_NODShiLtJ_G0019402.1 mouse_genomes_project 11 133521281 133558503 - MGP_NODShiLtJ_P0034047 Wdr45b protein_coding protein_coding MGP_NODShiLtJ_T0034048.1 MGP_NODShiLtJ_G0019402.1 mouse_genomes_project 11 133525454 133540749 - Wdr45b protein_coding processed_transcript MGP_NODShiLtJ_T0034049.1 MGP_NODShiLtJ_G0019402.1 mouse_genomes_project 11 133528315 133558399 - MGP_NODShiLtJ_P0034049 Wdr45b protein_coding protein_coding MGP_NODShiLtJ_T0034050.1 MGP_NODShiLtJ_G0019402.1 mouse_genomes_project 11 133534361 133558451 - MGP_NODShiLtJ_P0034050 Wdr45b protein_coding protein_coding MGP_NODShiLtJ_T0034051.1 MGP_NODShiLtJ_G0019402.1 mouse_genomes_project 11 133551339 133558459 - Wdr45b protein_coding retained_intron MGP_NODShiLtJ_T0028396.1 MGP_NODShiLtJ_G0018032.1 mouse_genomes_project 11 47424754 47464257 + MGP_NODShiLtJ_P0028396 Pwwp2a protein_coding protein_coding MGP_NODShiLtJ_T0028397.1 MGP_NODShiLtJ_G0018032.1 mouse_genomes_project 11 47424814 47477405 + MGP_NODShiLtJ_P0028397 Pwwp2a protein_coding protein_coding MGP_NODShiLtJ_T0028398.1 MGP_NODShiLtJ_G0018032.1 mouse_genomes_project 11 47425304 47426804 + Pwwp2a protein_coding processed_transcript MGP_NODShiLtJ_T0028399.1 MGP_NODShiLtJ_G0018032.1 mouse_genomes_project 11 47426894 47464257 + MGP_NODShiLtJ_P0028399 Pwwp2a protein_coding protein_coding MGP_NODShiLtJ_T0028400.1 MGP_NODShiLtJ_G0018032.1 mouse_genomes_project 11 47462308 47478485 + Pwwp2a protein_coding processed_transcript MGP_NODShiLtJ_T0028401.1 MGP_NODShiLtJ_G0018032.1 mouse_genomes_project 11 47474649 47477826 + Pwwp2a protein_coding processed_transcript MGP_NODShiLtJ_T0003305.1 MGP_NODShiLtJ_G0003042.1 mouse_genomes_project 11 130438697 130449588 - Gm11747 antisense antisense MGP_NODShiLtJ_T0098717.1 MGP_NODShiLtJ_G0037111.1 mouse_genomes_project 11 102573511 102573618 - Gm24856 snRNA snRNA MGP_NODShiLtJ_T0028764.1 MGP_NODShiLtJ_G0018134.1 mouse_genomes_project 11 56964981 56979024 + MGP_NODShiLtJ_P0028764 Skp1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028765.1 MGP_NODShiLtJ_G0018134.1 mouse_genomes_project 11 56964995 56980749 + MGP_NODShiLtJ_P0028765 Skp1a protein_coding protein_coding MGP_NODShiLtJ_T0028766.1 MGP_NODShiLtJ_G0018134.1 mouse_genomes_project 11 56965023 56972350 + Skp1a protein_coding retained_intron MGP_NODShiLtJ_T0028767.1 MGP_NODShiLtJ_G0018134.1 mouse_genomes_project 11 56965023 56979027 + MGP_NODShiLtJ_P0028767 Skp1a protein_coding protein_coding MGP_NODShiLtJ_T0028768.1 MGP_NODShiLtJ_G0018134.1 mouse_genomes_project 11 56965175 56980749 + MGP_NODShiLtJ_P0028768 Skp1a protein_coding protein_coding MGP_NODShiLtJ_T0028769.1 MGP_NODShiLtJ_G0018134.1 mouse_genomes_project 11 56970789 56979984 + MGP_NODShiLtJ_P0028769 Skp1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006122.1 MGP_NODShiLtJ_G0005109.1 mouse_genomes_project 11 22424169 22432010 + Gm12051 lincRNA lincRNA MGP_NODShiLtJ_T0029644.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75367824 75376933 + Ctc1 protein_coding retained_intron MGP_NODShiLtJ_T0029645.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75367984 75388883 + MGP_NODShiLtJ_P0029645 Ctc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029646.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75367995 75388880 + MGP_NODShiLtJ_P0029646 Ctc1 protein_coding protein_coding MGP_NODShiLtJ_T0029647.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75368001 75388885 + MGP_NODShiLtJ_P0029647 Ctc1 protein_coding protein_coding MGP_NODShiLtJ_T0029648.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75368032 75374537 + Ctc1 protein_coding processed_transcript MGP_NODShiLtJ_T0029649.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75379445 75380970 + Ctc1 protein_coding retained_intron MGP_NODShiLtJ_T0029650.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75380831 75383327 + Ctc1 protein_coding processed_transcript MGP_NODShiLtJ_T0029651.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75383007 75387358 + Ctc1 protein_coding processed_transcript MGP_NODShiLtJ_T0029652.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75386284 75388231 + Ctc1 protein_coding retained_intron MGP_NODShiLtJ_T0029653.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75386930 75388216 + Ctc1 protein_coding retained_intron MGP_NODShiLtJ_T0029654.1 MGP_NODShiLtJ_G0018362.1 mouse_genomes_project 11 75387288 75388590 + Ctc1 protein_coding retained_intron MGP_NODShiLtJ_T0030535.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83238322 83396278 - MGP_NODShiLtJ_P0030535 Vps53 protein_coding protein_coding MGP_NODShiLtJ_T0030536.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83238392 83396255 - MGP_NODShiLtJ_P0030536 Vps53 protein_coding protein_coding MGP_NODShiLtJ_T0030537.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83238393 83396248 - MGP_NODShiLtJ_P0030537 Vps53 protein_coding protein_coding MGP_NODShiLtJ_T0030538.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83254814 83285216 - Vps53 protein_coding retained_intron MGP_NODShiLtJ_T0030539.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83255753 83396130 - MGP_NODShiLtJ_P0030539 Vps53 protein_coding protein_coding MGP_NODShiLtJ_T0030540.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83255758 83396147 - MGP_NODShiLtJ_P0030540 Vps53 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030541.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83255758 83396130 - MGP_NODShiLtJ_P0030541 Vps53 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030542.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83312529 83396163 - MGP_NODShiLtJ_P0030542 Vps53 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030543.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83313144 83382868 - MGP_NODShiLtJ_P0030543 Vps53 protein_coding protein_coding MGP_NODShiLtJ_T0030545.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83316912 83396218 - Vps53 protein_coding retained_intron MGP_NODShiLtJ_T0030546.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83317028 83392398 - Vps53 protein_coding processed_transcript MGP_NODShiLtJ_T0030547.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83317033 83335452 - Vps53 protein_coding processed_transcript MGP_NODShiLtJ_T0030548.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83330282 83357612 - Vps53 protein_coding processed_transcript MGP_NODShiLtJ_T0030549.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83332052 83396265 - MGP_NODShiLtJ_P0030549 Vps53 protein_coding protein_coding MGP_NODShiLtJ_T0030550.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83387167 83396243 - Vps53 protein_coding processed_transcript MGP_NODShiLtJ_T0030551.1 MGP_NODShiLtJ_G0018575.1 mouse_genomes_project 11 83393568 83396269 - MGP_NODShiLtJ_P0030551 Vps53 protein_coding protein_coding MGP_NODShiLtJ_T0012458.1 MGP_NODShiLtJ_G0010566.1 mouse_genomes_project 11 48327285 48328288 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101576.1 MGP_NODShiLtJ_G0039746.1 mouse_genomes_project 11 119558783 119559745 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0027897.1 MGP_NODShiLtJ_G0017909.1 mouse_genomes_project 11 16001757 16140170 + MGP_NODShiLtJ_P0027897 Egfr protein_coding protein_coding MGP_NODShiLtJ_T0027898.1 MGP_NODShiLtJ_G0017909.1 mouse_genomes_project 11 16001765 16171272 + MGP_NODShiLtJ_P0027898 Egfr protein_coding protein_coding MGP_NODShiLtJ_T0027899.1 MGP_NODShiLtJ_G0017909.1 mouse_genomes_project 11 16001784 16044413 + Egfr protein_coding processed_transcript MGP_NODShiLtJ_T0027900.1 MGP_NODShiLtJ_G0017909.1 mouse_genomes_project 11 16131300 16136604 + MGP_NODShiLtJ_P0027900 Egfr protein_coding protein_coding MGP_NODShiLtJ_T0027901.1 MGP_NODShiLtJ_G0017909.1 mouse_genomes_project 11 16157428 16163049 + Egfr protein_coding processed_transcript MGP_NODShiLtJ_T0033537.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128657946 128693411 + MGP_NODShiLtJ_P0033537 Mfsd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033538.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128658801 128664624 + Mfsd11 protein_coding retained_intron MGP_NODShiLtJ_T0033539.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128658981 128659566 + Mfsd11 protein_coding processed_transcript MGP_NODShiLtJ_T0033540.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128659269 128693418 + MGP_NODShiLtJ_P0033540 Mfsd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033541.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128659286 128659764 + Mfsd11 protein_coding retained_intron MGP_NODShiLtJ_T0033542.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128659327 128694155 + MGP_NODShiLtJ_P0033542 Mfsd11 protein_coding protein_coding MGP_NODShiLtJ_T0033543.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128659336 128660224 + Mfsd11 protein_coding retained_intron MGP_NODShiLtJ_T0033544.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128659402 128694155 + MGP_NODShiLtJ_P0033544 Mfsd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033545.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128659533 128692866 + MGP_NODShiLtJ_P0033545 Mfsd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033546.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128659585 128692644 + MGP_NODShiLtJ_P0033546 Mfsd11 protein_coding protein_coding MGP_NODShiLtJ_T0033547.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128664653 128667370 + Mfsd11 protein_coding retained_intron MGP_NODShiLtJ_T0033548.1 MGP_NODShiLtJ_G0019300.1 mouse_genomes_project 11 128675750 128692536 + Mfsd11 protein_coding processed_transcript MGP_NODShiLtJ_T0032021.1 MGP_NODShiLtJ_G0018943.1 mouse_genomes_project 11 109289124 109298812 - MGP_NODShiLtJ_P0032021 Krt20 protein_coding protein_coding MGP_NODShiLtJ_T0098262.1 MGP_NODShiLtJ_G0036672.1 mouse_genomes_project 11 119216018 119217080 + Gm11656 sense_intronic sense_intronic MGP_NODShiLtJ_T0098263.1 MGP_NODShiLtJ_G0036672.1 mouse_genomes_project 11 119216034 119220115 + Gm11656 sense_intronic sense_intronic MGP_NODShiLtJ_T0030517.1 MGP_NODShiLtJ_G0018569.1 mouse_genomes_project 11 82848426 82876475 + MGP_NODShiLtJ_P0030517 Crk protein_coding protein_coding MGP_NODShiLtJ_T0030518.1 MGP_NODShiLtJ_G0018569.1 mouse_genomes_project 11 82848451 82874066 + MGP_NODShiLtJ_P0030518 Crk protein_coding protein_coding MGP_NODShiLtJ_T0030519.1 MGP_NODShiLtJ_G0018569.1 mouse_genomes_project 11 82848451 82877318 + MGP_NODShiLtJ_P0030519 Crk protein_coding protein_coding MGP_NODShiLtJ_T0030520.1 MGP_NODShiLtJ_G0018569.1 mouse_genomes_project 11 82848478 82871200 + MGP_NODShiLtJ_P0030520 Crk protein_coding protein_coding MGP_NODShiLtJ_T0030521.1 MGP_NODShiLtJ_G0018569.1 mouse_genomes_project 11 82848709 82871148 + MGP_NODShiLtJ_P0030521 Crk protein_coding protein_coding MGP_NODShiLtJ_T0027845.1 MGP_NODShiLtJ_G0017901.1 mouse_genomes_project 11 9386986 9434223 + protein_coding processed_transcript MGP_NODShiLtJ_T0027846.1 MGP_NODShiLtJ_G0017901.1 mouse_genomes_project 11 9390563 9464737 + MGP_NODShiLtJ_P0027846 protein_coding protein_coding MGP_NODShiLtJ_T0027847.1 MGP_NODShiLtJ_G0017901.1 mouse_genomes_project 11 9434951 9464735 + MGP_NODShiLtJ_P0027847 protein_coding protein_coding MGP_NODShiLtJ_T0028107.1 MGP_NODShiLtJ_G0017959.1 mouse_genomes_project 11 30438353 30483195 + Pnpt1 protein_coding processed_transcript MGP_NODShiLtJ_T0028108.1 MGP_NODShiLtJ_G0017959.1 mouse_genomes_project 11 30438357 30443308 + Pnpt1 protein_coding processed_transcript MGP_NODShiLtJ_T0028109.1 MGP_NODShiLtJ_G0017959.1 mouse_genomes_project 11 30438357 30478355 + MGP_NODShiLtJ_P0028109 Pnpt1 protein_coding protein_coding MGP_NODShiLtJ_T0028110.1 MGP_NODShiLtJ_G0017959.1 mouse_genomes_project 11 30445919 30453222 + Pnpt1 protein_coding processed_transcript MGP_NODShiLtJ_T0003245.1 MGP_NODShiLtJ_G0002992.1 mouse_genomes_project 11 111438077 111447045 - Gm28156 antisense antisense MGP_NODShiLtJ_T0017089.1 MGP_NODShiLtJ_G0015055.1 mouse_genomes_project 11 82612265 82617403 + Mir22hg processed_transcript processed_transcript MGP_NODShiLtJ_T0017090.1 MGP_NODShiLtJ_G0015055.1 mouse_genomes_project 11 82612370 82614756 + Mir22hg processed_transcript processed_transcript MGP_NODShiLtJ_T0028728.1 MGP_NODShiLtJ_G0018126.1 mouse_genomes_project 11 56360092 56428800 - MGP_NODShiLtJ_P0028728 Sec24a protein_coding protein_coding MGP_NODShiLtJ_T0028729.1 MGP_NODShiLtJ_G0018126.1 mouse_genomes_project 11 56387358 56429020 - MGP_NODShiLtJ_P0028729 Sec24a protein_coding protein_coding MGP_NODShiLtJ_T0028730.1 MGP_NODShiLtJ_G0018126.1 mouse_genomes_project 11 56387358 56429027 - MGP_NODShiLtJ_P0028730 Sec24a protein_coding protein_coding MGP_NODShiLtJ_T0028731.1 MGP_NODShiLtJ_G0018126.1 mouse_genomes_project 11 56397500 56429750 - Sec24a protein_coding retained_intron MGP_NODShiLtJ_T0028732.1 MGP_NODShiLtJ_G0018126.1 mouse_genomes_project 11 56408791 56443189 - Sec24a protein_coding retained_intron MGP_NODShiLtJ_T0030627.1 MGP_NODShiLtJ_G0018594.1 mouse_genomes_project 11 84788674 84796820 + MGP_NODShiLtJ_P0030627 Coro6 protein_coding protein_coding MGP_NODShiLtJ_T0030628.1 MGP_NODShiLtJ_G0018594.1 mouse_genomes_project 11 84788908 84790290 + MGP_NODShiLtJ_P0030628 Coro6 protein_coding protein_coding MGP_NODShiLtJ_T0030629.1 MGP_NODShiLtJ_G0018594.1 mouse_genomes_project 11 84790171 84795937 + MGP_NODShiLtJ_P0030629 Coro6 protein_coding protein_coding MGP_NODShiLtJ_T0030630.1 MGP_NODShiLtJ_G0018594.1 mouse_genomes_project 11 84790171 84795937 + MGP_NODShiLtJ_P0030630 Coro6 protein_coding protein_coding MGP_NODShiLtJ_T0030631.1 MGP_NODShiLtJ_G0018594.1 mouse_genomes_project 11 84790246 84795837 + MGP_NODShiLtJ_P0030631 Coro6 protein_coding protein_coding MGP_NODShiLtJ_T0030632.1 MGP_NODShiLtJ_G0018594.1 mouse_genomes_project 11 84790246 84795837 + MGP_NODShiLtJ_P0030632 Coro6 protein_coding protein_coding MGP_NODShiLtJ_T0031572.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104677306 104714680 - MGP_NODShiLtJ_P0031572 Kat7 protein_coding protein_coding MGP_NODShiLtJ_T0031573.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104677306 104714635 - MGP_NODShiLtJ_P0031573 Kat7 protein_coding protein_coding MGP_NODShiLtJ_T0031574.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104677306 104714680 - MGP_NODShiLtJ_P0031574 Kat7 protein_coding protein_coding MGP_NODShiLtJ_T0031575.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104677306 104714036 - MGP_NODShiLtJ_P0031575 Kat7 protein_coding protein_coding MGP_NODShiLtJ_T0031576.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104677306 104714036 - MGP_NODShiLtJ_P0031576 Kat7 protein_coding protein_coding MGP_NODShiLtJ_T0031577.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104678370 104684941 - MGP_NODShiLtJ_P0031577 Kat7 protein_coding protein_coding MGP_NODShiLtJ_T0031578.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104684948 104714623 - Kat7 protein_coding processed_transcript MGP_NODShiLtJ_T0031579.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104687187 104694791 - Kat7 protein_coding processed_transcript MGP_NODShiLtJ_T0031580.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104705946 104714642 - Kat7 protein_coding processed_transcript MGP_NODShiLtJ_T0031581.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104707588 104713947 - Kat7 protein_coding processed_transcript MGP_NODShiLtJ_T0031582.1 MGP_NODShiLtJ_G0018830.1 mouse_genomes_project 11 104710500 104714003 - Kat7 protein_coding processed_transcript MGP_NODShiLtJ_T0028482.1 MGP_NODShiLtJ_G0018057.1 mouse_genomes_project 11 50934624 51690343 - MGP_NODShiLtJ_P0028482 Sgcd protein_coding protein_coding MGP_NODShiLtJ_T0028483.1 MGP_NODShiLtJ_G0018057.1 mouse_genomes_project 11 51027184 51464912 - MGP_NODShiLtJ_P0028483 Sgcd protein_coding protein_coding MGP_NODShiLtJ_T0028484.1 MGP_NODShiLtJ_G0018057.1 mouse_genomes_project 11 51433804 51762687 - Sgcd protein_coding processed_transcript MGP_NODShiLtJ_T0028485.1 MGP_NODShiLtJ_G0018057.1 mouse_genomes_project 11 51690182 52149222 - Sgcd protein_coding processed_transcript MGP_NODShiLtJ_T0030755.1 MGP_NODShiLtJ_G0018618.1 mouse_genomes_project 11 85646515 85686137 - MGP_NODShiLtJ_P0030755 Supt6 protein_coding protein_coding MGP_NODShiLtJ_T0030756.1 MGP_NODShiLtJ_G0018618.1 mouse_genomes_project 11 85646797 85663316 - Supt6 protein_coding retained_intron MGP_NODShiLtJ_T0003278.1 MGP_NODShiLtJ_G0003023.1 mouse_genomes_project 11 120284310 120295851 - Gm11696 antisense antisense MGP_NODShiLtJ_T0003279.1 MGP_NODShiLtJ_G0003023.1 mouse_genomes_project 11 120285295 120285948 - Gm11696 antisense antisense MGP_NODShiLtJ_T0003280.1 MGP_NODShiLtJ_G0003023.1 mouse_genomes_project 11 120286294 120296295 - Gm11696 antisense antisense MGP_NODShiLtJ_T0003281.1 MGP_NODShiLtJ_G0003023.1 mouse_genomes_project 11 120286688 120295884 - Gm11696 antisense antisense MGP_NODShiLtJ_T0033895.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132753815 132762394 - Sirt7 protein_coding retained_intron MGP_NODShiLtJ_T0033896.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132753815 132762665 - Sirt7 protein_coding retained_intron MGP_NODShiLtJ_T0033897.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132753815 132762439 - MGP_NODShiLtJ_P0033897 Sirt7 protein_coding protein_coding MGP_NODShiLtJ_T0033898.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132753817 132762424 - Sirt7 protein_coding retained_intron MGP_NODShiLtJ_T0033899.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132753831 132762445 - Sirt7 protein_coding retained_intron MGP_NODShiLtJ_T0033900.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132753863 132756422 - MGP_NODShiLtJ_P0033900 Sirt7 protein_coding protein_coding MGP_NODShiLtJ_T0033901.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132754212 132754813 - Sirt7 protein_coding processed_transcript MGP_NODShiLtJ_T0033902.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132754291 132762424 - MGP_NODShiLtJ_P0033902 Sirt7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033903.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132756443 132762415 - Sirt7 protein_coding processed_transcript MGP_NODShiLtJ_T0033904.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132759414 132760227 - Sirt7 protein_coding retained_intron MGP_NODShiLtJ_T0033905.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132760704 132762417 - Sirt7 protein_coding retained_intron MGP_NODShiLtJ_T0033906.1 MGP_NODShiLtJ_G0019373.1 mouse_genomes_project 11 132761414 132762409 - MGP_NODShiLtJ_P0033906 Sirt7 protein_coding protein_coding MGP_NODShiLtJ_T0099959.1 MGP_NODShiLtJ_G0038353.1 mouse_genomes_project 11 108794647 108794762 + Gm26394 snoRNA snoRNA MGP_NODShiLtJ_T0028256.1 MGP_NODShiLtJ_G0017992.1 mouse_genomes_project 11 34246613 34252414 - MGP_NODShiLtJ_P0028256 Efcab9 protein_coding protein_coding MGP_NODShiLtJ_T0028257.1 MGP_NODShiLtJ_G0017992.1 mouse_genomes_project 11 34247202 34257628 - MGP_NODShiLtJ_P0028257 Efcab9 protein_coding protein_coding MGP_NODShiLtJ_T0027947.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20325169 20386526 - MGP_NODShiLtJ_P0027947 Aftph protein_coding protein_coding MGP_NODShiLtJ_T0027948.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20325169 20371975 - MGP_NODShiLtJ_P0027948 Aftph protein_coding protein_coding MGP_NODShiLtJ_T0027949.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20325801 20371510 - MGP_NODShiLtJ_P0027949 Aftph protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027950.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20325827 20386392 - MGP_NODShiLtJ_P0027950 Aftph protein_coding protein_coding MGP_NODShiLtJ_T0027951.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20326066 20334378 - Aftph protein_coding retained_intron MGP_NODShiLtJ_T0027952.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20326203 20370540 - MGP_NODShiLtJ_P0027952 Aftph protein_coding protein_coding MGP_NODShiLtJ_T0027953.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20337589 20356163 - Aftph protein_coding retained_intron MGP_NODShiLtJ_T0027954.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20346501 20356089 - Aftph protein_coding retained_intron MGP_NODShiLtJ_T0027955.1 MGP_NODShiLtJ_G0017925.1 mouse_genomes_project 11 20352465 20356069 - Aftph protein_coding retained_intron MGP_NODShiLtJ_T0027738.1 MGP_NODShiLtJ_G0017873.1 mouse_genomes_project 11 3355162 3356777 + MGP_NODShiLtJ_P0027738 A730071L15Rik protein_coding protein_coding MGP_NODShiLtJ_T0029280.1 MGP_NODShiLtJ_G0018284.1 mouse_genomes_project 11 66802708 66825987 - MGP_NODShiLtJ_P0029280 Usp22 protein_coding protein_coding MGP_NODShiLtJ_T0029281.1 MGP_NODShiLtJ_G0018284.1 mouse_genomes_project 11 66804950 66808324 - Usp22 protein_coding retained_intron MGP_NODShiLtJ_T0029282.1 MGP_NODShiLtJ_G0018284.1 mouse_genomes_project 11 66806641 66810316 - Usp22 protein_coding retained_intron MGP_NODShiLtJ_T0029283.1 MGP_NODShiLtJ_G0018284.1 mouse_genomes_project 11 66812326 66819207 - MGP_NODShiLtJ_P0029283 Usp22 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029284.1 MGP_NODShiLtJ_G0018284.1 mouse_genomes_project 11 66813703 66825961 - Usp22 protein_coding retained_intron MGP_NODShiLtJ_T0031134.1 MGP_NODShiLtJ_G0018724.1 mouse_genomes_project 11 92869105 92904779 + MGP_NODShiLtJ_P0031134 Myo19 protein_coding protein_coding MGP_NODShiLtJ_T0031135.1 MGP_NODShiLtJ_G0018724.1 mouse_genomes_project 11 92869127 92871949 + Myo19 protein_coding processed_transcript MGP_NODShiLtJ_T0031136.1 MGP_NODShiLtJ_G0018724.1 mouse_genomes_project 11 92869177 92904675 + Myo19 protein_coding processed_transcript MGP_NODShiLtJ_T0031137.1 MGP_NODShiLtJ_G0018724.1 mouse_genomes_project 11 92869267 92869961 + Myo19 protein_coding processed_transcript MGP_NODShiLtJ_T0031138.1 MGP_NODShiLtJ_G0018724.1 mouse_genomes_project 11 92869310 92904684 + Myo19 protein_coding processed_transcript MGP_NODShiLtJ_T0031139.1 MGP_NODShiLtJ_G0018724.1 mouse_genomes_project 11 92869324 92886963 + MGP_NODShiLtJ_P0031139 Myo19 protein_coding protein_coding MGP_NODShiLtJ_T0031140.1 MGP_NODShiLtJ_G0018724.1 mouse_genomes_project 11 92871543 92904675 + Myo19 protein_coding processed_transcript MGP_NODShiLtJ_T0032934.1 MGP_NODShiLtJ_G0019176.1 mouse_genomes_project 11 118531071 118597206 - MGP_NODShiLtJ_P0032934 Cacng4 protein_coding protein_coding MGP_NODShiLtJ_T0032935.1 MGP_NODShiLtJ_G0019176.1 mouse_genomes_project 11 118533899 118540701 - Cacng4 protein_coding processed_transcript MGP_NODShiLtJ_T0032232.1 MGP_NODShiLtJ_G0019032.1 mouse_genomes_project 11 111145594 111150525 + MGP_NODShiLtJ_P0032232 Mlx protein_coding protein_coding MGP_NODShiLtJ_T0032233.1 MGP_NODShiLtJ_G0019032.1 mouse_genomes_project 11 111145594 111150525 + MGP_NODShiLtJ_P0032233 Mlx protein_coding protein_coding MGP_NODShiLtJ_T0032234.1 MGP_NODShiLtJ_G0019032.1 mouse_genomes_project 11 111145607 111149444 + Mlx protein_coding processed_transcript MGP_NODShiLtJ_T0032235.1 MGP_NODShiLtJ_G0019032.1 mouse_genomes_project 11 111145607 111149464 + Mlx protein_coding processed_transcript MGP_NODShiLtJ_T0032236.1 MGP_NODShiLtJ_G0019032.1 mouse_genomes_project 11 111145617 111150525 + MGP_NODShiLtJ_P0032236 Mlx protein_coding protein_coding MGP_NODShiLtJ_T0032237.1 MGP_NODShiLtJ_G0019032.1 mouse_genomes_project 11 111145621 111147283 + MGP_NODShiLtJ_P0032237 Mlx protein_coding protein_coding MGP_NODShiLtJ_T0032238.1 MGP_NODShiLtJ_G0019032.1 mouse_genomes_project 11 111147979 111149836 + Mlx protein_coding processed_transcript MGP_NODShiLtJ_T0031900.1 MGP_NODShiLtJ_G0018910.1 mouse_genomes_project 11 108173748 108175032 - MGP_NODShiLtJ_P0031900 Mien1 protein_coding protein_coding MGP_NODShiLtJ_T0012594.1 MGP_NODShiLtJ_G0010702.1 mouse_genomes_project 11 100613149 100614098 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003226.1 MGP_NODShiLtJ_G0002978.1 mouse_genomes_project 11 106504390 106507732 - Gm11525 antisense antisense MGP_NODShiLtJ_T0031060.1 MGP_NODShiLtJ_G0018706.1 mouse_genomes_project 11 91546730 91548830 + MGP_NODShiLtJ_P0031060 Ccl4 protein_coding protein_coding MGP_NODShiLtJ_T0012583.1 MGP_NODShiLtJ_G0010691.1 mouse_genomes_project 11 94790330 94790929 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003213.1 MGP_NODShiLtJ_G0002968.1 mouse_genomes_project 11 104714862 104731070 + Gm11520 antisense antisense MGP_NODShiLtJ_T0012405.1 MGP_NODShiLtJ_G0010513.1 mouse_genomes_project 11 22581952 22582243 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029066.1 MGP_NODShiLtJ_G0018232.1 mouse_genomes_project 11 64369278 64379541 + MGP_NODShiLtJ_P0029066 protein_coding protein_coding MGP_NODShiLtJ_T0029067.1 MGP_NODShiLtJ_G0018232.1 mouse_genomes_project 11 64369331 64380009 + MGP_NODShiLtJ_P0029067 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029068.1 MGP_NODShiLtJ_G0018232.1 mouse_genomes_project 11 64369436 64379816 + MGP_NODShiLtJ_P0029068 protein_coding protein_coding MGP_NODShiLtJ_T0029069.1 MGP_NODShiLtJ_G0018232.1 mouse_genomes_project 11 64369436 64379816 + MGP_NODShiLtJ_P0029069 protein_coding protein_coding MGP_NODShiLtJ_T0006183.1 MGP_NODShiLtJ_G0005163.1 mouse_genomes_project 11 65666030 65669042 - 4930412M03Rik lincRNA lincRNA MGP_NODShiLtJ_T0028228.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33920326 33964316 - MGP_NODShiLtJ_P0028228 Nprl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028233.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33925961 33952707 - Nprl3 protein_coding processed_transcript MGP_NODShiLtJ_T0028234.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33925961 33964316 - MGP_NODShiLtJ_P0028234 Nprl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028235.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33926661 33964334 - MGP_NODShiLtJ_P0028235 Nprl3 protein_coding protein_coding MGP_NODShiLtJ_T0028236.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33926752 33964285 - MGP_NODShiLtJ_P0028236 Nprl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028237.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33927633 33929093 - Nprl3 protein_coding retained_intron MGP_NODShiLtJ_T0028238.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33927641 33964256 - MGP_NODShiLtJ_P0028238 Nprl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028239.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33927649 33964174 - MGP_NODShiLtJ_P0028239 Nprl3 protein_coding protein_coding MGP_NODShiLtJ_T0028240.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33931538 33934633 - Nprl3 protein_coding retained_intron MGP_NODShiLtJ_T0028241.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33931584 33932728 - Nprl3 protein_coding retained_intron MGP_NODShiLtJ_T0028242.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33934491 33950353 - Nprl3 protein_coding retained_intron MGP_NODShiLtJ_T0028243.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33934554 33964285 - MGP_NODShiLtJ_P0028243 Nprl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028244.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33936350 33946472 - Nprl3 protein_coding processed_transcript MGP_NODShiLtJ_T0028245.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33944072 33946572 - Nprl3 protein_coding processed_transcript MGP_NODShiLtJ_T0028246.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33946456 33964242 - MGP_NODShiLtJ_P0028246 Nprl3 protein_coding protein_coding MGP_NODShiLtJ_T0028247.1 MGP_NODShiLtJ_G0017985.1 mouse_genomes_project 11 33958673 33964178 - Nprl3 protein_coding processed_transcript MGP_NODShiLtJ_T0003153.1 MGP_NODShiLtJ_G0002921.1 mouse_genomes_project 11 69893804 69897618 + 9630013K17Rik antisense antisense MGP_NODShiLtJ_T0012455.1 MGP_NODShiLtJ_G0010563.1 mouse_genomes_project 11 47351696 47352897 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012609.1 MGP_NODShiLtJ_G0010717.1 mouse_genomes_project 11 106714088 106714208 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031835.1 MGP_NODShiLtJ_G0018894.1 mouse_genomes_project 11 107529019 107562503 - MGP_NODShiLtJ_P0031835 Fbxo47 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031836.1 MGP_NODShiLtJ_G0018894.1 mouse_genomes_project 11 107532540 107534272 - Fbxo47 protein_coding retained_intron MGP_NODShiLtJ_T0031837.1 MGP_NODShiLtJ_G0018894.1 mouse_genomes_project 11 107532540 107567475 - MGP_NODShiLtJ_P0031837 Fbxo47 protein_coding protein_coding MGP_NODShiLtJ_T0009616.1 MGP_NODShiLtJ_G0007749.1 mouse_genomes_project 11 79109409 79109518 + Mir6338 miRNA miRNA MGP_NODShiLtJ_T0031287.1 MGP_NODShiLtJ_G0018757.1 mouse_genomes_project 11 95862812 95910776 + MGP_NODShiLtJ_P0031287 Hsf5 protein_coding protein_coding MGP_NODShiLtJ_T0017045.1 MGP_NODShiLtJ_G0015028.1 mouse_genomes_project 11 22847986 22850321 + 9130230N09Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017161.1 MGP_NODShiLtJ_G0015091.1 mouse_genomes_project 11 129519841 129522419 + 2900041M22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0031146.1 MGP_NODShiLtJ_G0018726.1 mouse_genomes_project 11 92956604 92962716 + Car4 protein_coding retained_intron MGP_NODShiLtJ_T0031147.1 MGP_NODShiLtJ_G0018726.1 mouse_genomes_project 11 92956606 92966205 + MGP_NODShiLtJ_P0031147 Car4 protein_coding protein_coding MGP_NODShiLtJ_T0031148.1 MGP_NODShiLtJ_G0018726.1 mouse_genomes_project 11 92956629 92962079 + Car4 protein_coding processed_transcript MGP_NODShiLtJ_T0031149.1 MGP_NODShiLtJ_G0018726.1 mouse_genomes_project 11 92956643 92964724 + MGP_NODShiLtJ_P0031149 Car4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031150.1 MGP_NODShiLtJ_G0018726.1 mouse_genomes_project 11 92956922 92964389 + MGP_NODShiLtJ_P0031150 Car4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031151.1 MGP_NODShiLtJ_G0018726.1 mouse_genomes_project 11 92961101 92966195 + MGP_NODShiLtJ_P0031151 Car4 protein_coding protein_coding MGP_NODShiLtJ_T0030659.1 MGP_NODShiLtJ_G0018602.1 mouse_genomes_project 11 85108232 85112900 - Cryba1 protein_coding retained_intron MGP_NODShiLtJ_T0030660.1 MGP_NODShiLtJ_G0018602.1 mouse_genomes_project 11 85108244 85116349 - MGP_NODShiLtJ_P0030660 Cryba1 protein_coding protein_coding MGP_NODShiLtJ_T0006136.1 MGP_NODShiLtJ_G0005122.1 mouse_genomes_project 11 25564606 25715998 + 4933427E13Rik lincRNA lincRNA MGP_NODShiLtJ_T0006138.1 MGP_NODShiLtJ_G0005122.1 mouse_genomes_project 11 25670257 25716002 + 4933427E13Rik lincRNA lincRNA MGP_NODShiLtJ_T0006139.1 MGP_NODShiLtJ_G0005122.1 mouse_genomes_project 11 25670286 25674866 + 4933427E13Rik lincRNA lincRNA MGP_NODShiLtJ_T0006140.1 MGP_NODShiLtJ_G0005122.1 mouse_genomes_project 11 25674104 25705697 + 4933427E13Rik lincRNA lincRNA MGP_NODShiLtJ_T0006201.1 MGP_NODShiLtJ_G0005177.1 mouse_genomes_project 11 77213866 77215582 - Gm12319 lincRNA lincRNA MGP_NODShiLtJ_T0031366.1 MGP_NODShiLtJ_G0018777.1 mouse_genomes_project 11 97392316 97396010 - MGP_NODShiLtJ_P0031366 Gm15698 protein_coding protein_coding MGP_NODShiLtJ_T0030806.1 MGP_NODShiLtJ_G0018630.1 mouse_genomes_project 11 85957557 85959052 + Vtn protein_coding retained_intron MGP_NODShiLtJ_T0030807.1 MGP_NODShiLtJ_G0018630.1 mouse_genomes_project 11 85957586 85960791 + MGP_NODShiLtJ_P0030807 Vtn protein_coding protein_coding MGP_NODShiLtJ_T0030808.1 MGP_NODShiLtJ_G0018630.1 mouse_genomes_project 11 85957638 85958711 + Vtn protein_coding retained_intron MGP_NODShiLtJ_T0030809.1 MGP_NODShiLtJ_G0018630.1 mouse_genomes_project 11 85959072 85960689 + Vtn protein_coding retained_intron MGP_NODShiLtJ_T0006257.1 MGP_NODShiLtJ_G0005216.1 mouse_genomes_project 11 105111791 105115932 + lincRNA lincRNA MGP_NODShiLtJ_T0031324.1 MGP_NODShiLtJ_G0018765.1 mouse_genomes_project 11 96177371 96179572 - MGP_NODShiLtJ_P0031324 Olfr463 protein_coding protein_coding MGP_NODShiLtJ_T0031257.1 MGP_NODShiLtJ_G0018753.1 mouse_genomes_project 11 95604791 95801426 + MGP_NODShiLtJ_P0031257 Tex14 protein_coding protein_coding MGP_NODShiLtJ_T0031258.1 MGP_NODShiLtJ_G0018753.1 mouse_genomes_project 11 95641297 95715781 + MGP_NODShiLtJ_P0031258 Tex14 protein_coding protein_coding MGP_NODShiLtJ_T0031259.1 MGP_NODShiLtJ_G0018753.1 mouse_genomes_project 11 95648551 95801123 + MGP_NODShiLtJ_P0031259 Tex14 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031260.1 MGP_NODShiLtJ_G0018753.1 mouse_genomes_project 11 95778951 95800560 + MGP_NODShiLtJ_P0031260 Tex14 protein_coding protein_coding MGP_NODShiLtJ_T0031261.1 MGP_NODShiLtJ_G0018753.1 mouse_genomes_project 11 95781231 95801422 + MGP_NODShiLtJ_P0031261 Tex14 protein_coding protein_coding MGP_NODShiLtJ_T0031262.1 MGP_NODShiLtJ_G0018753.1 mouse_genomes_project 11 95787883 95801269 + Tex14 protein_coding processed_transcript MGP_NODShiLtJ_T0030875.1 MGP_NODShiLtJ_G0018651.1 mouse_genomes_project 11 87465665 87504509 - MGP_NODShiLtJ_P0030875 Utp6 protein_coding protein_coding MGP_NODShiLtJ_T0030876.1 MGP_NODShiLtJ_G0018651.1 mouse_genomes_project 11 87467297 87504520 - MGP_NODShiLtJ_P0030876 Utp6 protein_coding protein_coding MGP_NODShiLtJ_T0030877.1 MGP_NODShiLtJ_G0018651.1 mouse_genomes_project 11 87469194 87484287 - Utp6 protein_coding retained_intron MGP_NODShiLtJ_T0030878.1 MGP_NODShiLtJ_G0018651.1 mouse_genomes_project 11 87500726 87504497 - Utp6 protein_coding retained_intron MGP_NODShiLtJ_T0003293.1 MGP_NODShiLtJ_G0003034.1 mouse_genomes_project 11 128312487 128316342 - Gm29292 antisense antisense MGP_NODShiLtJ_T0003081.1 MGP_NODShiLtJ_G0002857.1 mouse_genomes_project 11 18425868 18427200 + Gm16141 antisense antisense MGP_NODShiLtJ_T0099935.1 MGP_NODShiLtJ_G0038329.1 mouse_genomes_project 11 76074790 76074933 - Gm24029 snoRNA snoRNA MGP_NODShiLtJ_T0009560.1 MGP_NODShiLtJ_G0007693.1 mouse_genomes_project 11 1897104 1897162 + Mir6918 miRNA miRNA MGP_NODShiLtJ_T0031732.1 MGP_NODShiLtJ_G0018872.1 mouse_genomes_project 11 106634012 106641633 + MGP_NODShiLtJ_P0031732 Mrpl10 protein_coding protein_coding MGP_NODShiLtJ_T0031733.1 MGP_NODShiLtJ_G0018872.1 mouse_genomes_project 11 106634047 106640940 + MGP_NODShiLtJ_P0031733 Mrpl10 protein_coding protein_coding MGP_NODShiLtJ_T0033737.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131664757 131886638 + Rptor protein_coding retained_intron MGP_NODShiLtJ_T0033738.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131664847 131844908 + Rptor protein_coding retained_intron MGP_NODShiLtJ_T0033739.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131664867 131910234 + Rptor protein_coding retained_intron MGP_NODShiLtJ_T0033740.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131665001 131975871 + MGP_NODShiLtJ_P0033740 Rptor protein_coding protein_coding MGP_NODShiLtJ_T0033741.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131665550 131976040 + MGP_NODShiLtJ_P0033741 Rptor protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033742.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131718300 131930471 + Rptor protein_coding retained_intron MGP_NODShiLtJ_T0033743.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131861397 131912156 + MGP_NODShiLtJ_P0033743 Rptor protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033744.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131873871 131931839 + Rptor protein_coding retained_intron MGP_NODShiLtJ_T0033745.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131886408 131921321 + MGP_NODShiLtJ_P0033745 Rptor protein_coding protein_coding MGP_NODShiLtJ_T0033746.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131921281 131972645 + MGP_NODShiLtJ_P0033746 Rptor protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033747.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131921331 131922825 + Rptor protein_coding retained_intron MGP_NODShiLtJ_T0033748.1 MGP_NODShiLtJ_G0019342.1 mouse_genomes_project 11 131922466 131949476 + MGP_NODShiLtJ_P0033748 Rptor protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032051.1 MGP_NODShiLtJ_G0018971.1 mouse_genomes_project 11 109714935 109715834 - MGP_NODShiLtJ_P0032051 protein_coding protein_coding MGP_NODShiLtJ_T0006130.1 MGP_NODShiLtJ_G0005117.1 mouse_genomes_project 11 24417406 24433568 + Gm12066 lincRNA lincRNA MGP_NODShiLtJ_T0101551.1 MGP_NODShiLtJ_G0039721.1 mouse_genomes_project 11 80362679 80363614 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009653.1 MGP_NODShiLtJ_G0007786.1 mouse_genomes_project 11 107962499 107962577 + Gm27399 miRNA miRNA MGP_NODShiLtJ_T0032918.1 MGP_NODShiLtJ_G0019172.1 mouse_genomes_project 11 117929637 118231200 - MGP_NODShiLtJ_P0032918 Pitpnc1 protein_coding protein_coding MGP_NODShiLtJ_T0032919.1 MGP_NODShiLtJ_G0019172.1 mouse_genomes_project 11 117929637 118070144 - MGP_NODShiLtJ_P0032919 Pitpnc1 protein_coding protein_coding MGP_NODShiLtJ_T0032920.1 MGP_NODShiLtJ_G0019172.1 mouse_genomes_project 11 117949382 118080705 - MGP_NODShiLtJ_P0032920 Pitpnc1 protein_coding protein_coding MGP_NODShiLtJ_T0032921.1 MGP_NODShiLtJ_G0019172.1 mouse_genomes_project 11 118053101 118070033 - Pitpnc1 protein_coding processed_transcript MGP_NODShiLtJ_T0003167.1 MGP_NODShiLtJ_G0002933.1 mouse_genomes_project 11 75780387 75781576 + Kdm6bos antisense antisense MGP_NODShiLtJ_T0099920.1 MGP_NODShiLtJ_G0038314.1 mouse_genomes_project 11 52861998 52862117 + Gm24422 snoRNA snoRNA MGP_NODShiLtJ_T0030372.1 MGP_NODShiLtJ_G0018533.1 mouse_genomes_project 11 81109410 81110358 + MGP_NODShiLtJ_P0030372 Olfr401 protein_coding protein_coding MGP_NODShiLtJ_T0012429.1 MGP_NODShiLtJ_G0010537.1 mouse_genomes_project 11 32248950 32249688 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030615.1 MGP_NODShiLtJ_G0018592.1 mouse_genomes_project 11 84382182 84493182 - MGP_NODShiLtJ_P0030615 protein_coding protein_coding MGP_NODShiLtJ_T0030616.1 MGP_NODShiLtJ_G0018592.1 mouse_genomes_project 11 84382211 84396913 - protein_coding retained_intron MGP_NODShiLtJ_T0030617.1 MGP_NODShiLtJ_G0018592.1 mouse_genomes_project 11 84382452 84451675 - MGP_NODShiLtJ_P0030617 protein_coding protein_coding MGP_NODShiLtJ_T0030618.1 MGP_NODShiLtJ_G0018592.1 mouse_genomes_project 11 84396570 84440494 - protein_coding retained_intron MGP_NODShiLtJ_T0030619.1 MGP_NODShiLtJ_G0018592.1 mouse_genomes_project 11 84451567 84470386 - protein_coding processed_transcript MGP_NODShiLtJ_T0032806.1 MGP_NODShiLtJ_G0019149.1 mouse_genomes_project 11 116780220 116820860 - Strada protein_coding processed_transcript MGP_NODShiLtJ_T0032807.1 MGP_NODShiLtJ_G0019149.1 mouse_genomes_project 11 116780241 116811902 - MGP_NODShiLtJ_P0032807 Strada protein_coding protein_coding MGP_NODShiLtJ_T0032808.1 MGP_NODShiLtJ_G0019149.1 mouse_genomes_project 11 116780738 116811928 - MGP_NODShiLtJ_P0032808 Strada protein_coding protein_coding MGP_NODShiLtJ_T0032809.1 MGP_NODShiLtJ_G0019149.1 mouse_genomes_project 11 116785365 116811905 - MGP_NODShiLtJ_P0032809 Strada protein_coding protein_coding MGP_NODShiLtJ_T0032810.1 MGP_NODShiLtJ_G0019149.1 mouse_genomes_project 11 116801574 116811938 - MGP_NODShiLtJ_P0032810 Strada protein_coding protein_coding MGP_NODShiLtJ_T0012654.1 MGP_NODShiLtJ_G0010762.1 mouse_genomes_project 11 126188375 126188677 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003227.1 MGP_NODShiLtJ_G0002979.1 mouse_genomes_project 11 106761963 106762649 + Gm11583 antisense antisense MGP_NODShiLtJ_T0030892.1 MGP_NODShiLtJ_G0018654.1 mouse_genomes_project 11 87655330 87709474 + MGP_NODShiLtJ_P0030892 Atad5 protein_coding protein_coding MGP_NODShiLtJ_T0030893.1 MGP_NODShiLtJ_G0018654.1 mouse_genomes_project 11 87655330 87709477 + MGP_NODShiLtJ_P0030893 Atad5 protein_coding protein_coding MGP_NODShiLtJ_T0030894.1 MGP_NODShiLtJ_G0018654.1 mouse_genomes_project 11 87668517 87709477 + Atad5 protein_coding processed_transcript MGP_NODShiLtJ_T0030895.1 MGP_NODShiLtJ_G0018654.1 mouse_genomes_project 11 87669636 87675109 + Atad5 protein_coding retained_intron MGP_NODShiLtJ_T0033626.1 MGP_NODShiLtJ_G0019319.1 mouse_genomes_project 11 130090066 130214216 - MGP_NODShiLtJ_P0033626 Cyth1 protein_coding protein_coding MGP_NODShiLtJ_T0033627.1 MGP_NODShiLtJ_G0019319.1 mouse_genomes_project 11 130125901 130174891 - MGP_NODShiLtJ_P0033627 Cyth1 protein_coding protein_coding MGP_NODShiLtJ_T0033628.1 MGP_NODShiLtJ_G0019319.1 mouse_genomes_project 11 130125901 130214306 - MGP_NODShiLtJ_P0033628 Cyth1 protein_coding protein_coding MGP_NODShiLtJ_T0033629.1 MGP_NODShiLtJ_G0019319.1 mouse_genomes_project 11 130125910 130214274 - MGP_NODShiLtJ_P0033629 Cyth1 protein_coding protein_coding MGP_NODShiLtJ_T0033630.1 MGP_NODShiLtJ_G0019319.1 mouse_genomes_project 11 130146707 130189856 - Cyth1 protein_coding processed_transcript MGP_NODShiLtJ_T0033631.1 MGP_NODShiLtJ_G0019319.1 mouse_genomes_project 11 130147162 130181174 - Cyth1 protein_coding processed_transcript MGP_NODShiLtJ_T0033632.1 MGP_NODShiLtJ_G0019319.1 mouse_genomes_project 11 130147181 130174891 - MGP_NODShiLtJ_P0033632 Cyth1 protein_coding protein_coding MGP_NODShiLtJ_T0029209.1 MGP_NODShiLtJ_G0018267.1 mouse_genomes_project 11 65969204 65986762 - MGP_NODShiLtJ_P0029209 Atpaf2 protein_coding protein_coding MGP_NODShiLtJ_T0029210.1 MGP_NODShiLtJ_G0018267.1 mouse_genomes_project 11 65970055 65986729 - MGP_NODShiLtJ_P0029210 Atpaf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029211.1 MGP_NODShiLtJ_G0018267.1 mouse_genomes_project 11 65972414 65986753 - Atpaf2 protein_coding processed_transcript MGP_NODShiLtJ_T0029212.1 MGP_NODShiLtJ_G0018267.1 mouse_genomes_project 11 65974289 65986746 - Atpaf2 protein_coding processed_transcript MGP_NODShiLtJ_T0029213.1 MGP_NODShiLtJ_G0018267.1 mouse_genomes_project 11 65975868 65988176 - Atpaf2 protein_coding processed_transcript MGP_NODShiLtJ_T0029214.1 MGP_NODShiLtJ_G0018267.1 mouse_genomes_project 11 65977708 65986747 - Atpaf2 protein_coding retained_intron MGP_NODShiLtJ_T0033429.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128049254 128068828 - Exoc7 protein_coding processed_transcript MGP_NODShiLtJ_T0033430.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128049254 128068828 - MGP_NODShiLtJ_P0033430 Exoc7 protein_coding protein_coding MGP_NODShiLtJ_T0033431.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128049254 128068828 - MGP_NODShiLtJ_P0033431 Exoc7 protein_coding protein_coding MGP_NODShiLtJ_T0033432.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128049254 128068828 - MGP_NODShiLtJ_P0033432 Exoc7 protein_coding protein_coding MGP_NODShiLtJ_T0033433.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128050316 128051730 - Exoc7 protein_coding processed_transcript MGP_NODShiLtJ_T0033434.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128050362 128052720 - Exoc7 protein_coding processed_transcript MGP_NODShiLtJ_T0033435.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128053821 128059018 - Exoc7 protein_coding processed_transcript MGP_NODShiLtJ_T0033436.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128056931 128068746 - MGP_NODShiLtJ_P0033436 Exoc7 protein_coding protein_coding MGP_NODShiLtJ_T0033437.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128066712 128068821 - MGP_NODShiLtJ_P0033437 Exoc7 protein_coding protein_coding MGP_NODShiLtJ_T0033438.1 MGP_NODShiLtJ_G0019280.1 mouse_genomes_project 11 128067131 128069326 - MGP_NODShiLtJ_P0033438 Exoc7 protein_coding protein_coding MGP_NODShiLtJ_T0029685.1 MGP_NODShiLtJ_G0018370.1 mouse_genomes_project 11 75480155 75505682 + MGP_NODShiLtJ_P0029685 Aloxe3 protein_coding protein_coding MGP_NODShiLtJ_T0029686.1 MGP_NODShiLtJ_G0018370.1 mouse_genomes_project 11 75480474 75489638 + Aloxe3 protein_coding retained_intron MGP_NODShiLtJ_T0029687.1 MGP_NODShiLtJ_G0018370.1 mouse_genomes_project 11 75480662 75488779 + MGP_NODShiLtJ_P0029687 Aloxe3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029688.1 MGP_NODShiLtJ_G0018370.1 mouse_genomes_project 11 75488396 75489361 + Aloxe3 protein_coding retained_intron MGP_NODShiLtJ_T0029689.1 MGP_NODShiLtJ_G0018370.1 mouse_genomes_project 11 75488571 75496983 + Aloxe3 protein_coding retained_intron MGP_NODShiLtJ_T0029690.1 MGP_NODShiLtJ_G0018370.1 mouse_genomes_project 11 75489638 75497061 + Aloxe3 protein_coding retained_intron MGP_NODShiLtJ_T0032010.1 MGP_NODShiLtJ_G0018935.1 mouse_genomes_project 11 109071121 109084295 - MGP_NODShiLtJ_P0032010 Krt222 protein_coding protein_coding MGP_NODShiLtJ_T0032011.1 MGP_NODShiLtJ_G0018935.1 mouse_genomes_project 11 109072250 109084313 - MGP_NODShiLtJ_P0032011 Krt222 protein_coding protein_coding MGP_NODShiLtJ_T0032012.1 MGP_NODShiLtJ_G0018935.1 mouse_genomes_project 11 109073303 109077520 - Krt222 protein_coding processed_transcript MGP_NODShiLtJ_T0030481.1 MGP_NODShiLtJ_G0018563.1 mouse_genomes_project 11 82668533 82671608 + MGP_NODShiLtJ_P0030481 Rilp protein_coding protein_coding MGP_NODShiLtJ_T0030482.1 MGP_NODShiLtJ_G0018563.1 mouse_genomes_project 11 82668906 82671603 + Rilp protein_coding retained_intron MGP_NODShiLtJ_T0003214.1 MGP_NODShiLtJ_G0002969.1 mouse_genomes_project 11 104744352 104745797 - Gm11521 antisense antisense MGP_NODShiLtJ_T0009611.1 MGP_NODShiLtJ_G0007744.1 mouse_genomes_project 11 76731880 76731964 + Mir497 miRNA miRNA MGP_NODShiLtJ_T0031606.1 MGP_NODShiLtJ_G0018837.1 mouse_genomes_project 11 105162426 105228867 + MGP_NODShiLtJ_P0031606 Zfp652 protein_coding protein_coding MGP_NODShiLtJ_T0031607.1 MGP_NODShiLtJ_G0018837.1 mouse_genomes_project 11 105162697 105298236 + MGP_NODShiLtJ_P0031607 Zfp652 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031609.1 MGP_NODShiLtJ_G0018837.1 mouse_genomes_project 11 105204126 105228867 + MGP_NODShiLtJ_P0031609 Zfp652 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031610.1 MGP_NODShiLtJ_G0018837.1 mouse_genomes_project 11 105204193 105221226 + MGP_NODShiLtJ_P0031610 Zfp652 protein_coding protein_coding MGP_NODShiLtJ_T0012537.1 MGP_NODShiLtJ_G0010645.1 mouse_genomes_project 11 77060775 77061094 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033912.1 MGP_NODShiLtJ_G0019375.1 mouse_genomes_project 11 132776639 132784377 - MGP_NODShiLtJ_P0033912 Pycr1 protein_coding protein_coding MGP_NODShiLtJ_T0033913.1 MGP_NODShiLtJ_G0019375.1 mouse_genomes_project 11 132780122 132784455 - MGP_NODShiLtJ_P0033913 Pycr1 protein_coding protein_coding MGP_NODShiLtJ_T0033914.1 MGP_NODShiLtJ_G0019375.1 mouse_genomes_project 11 132781930 132784350 - MGP_NODShiLtJ_P0033914 Pycr1 protein_coding protein_coding MGP_NODShiLtJ_T0033915.1 MGP_NODShiLtJ_G0019375.1 mouse_genomes_project 11 132782184 132784411 - MGP_NODShiLtJ_P0033915 Pycr1 protein_coding protein_coding MGP_NODShiLtJ_T0033916.1 MGP_NODShiLtJ_G0019375.1 mouse_genomes_project 11 132782420 132784476 - MGP_NODShiLtJ_P0033916 Pycr1 protein_coding protein_coding MGP_NODShiLtJ_T0033917.1 MGP_NODShiLtJ_G0019375.1 mouse_genomes_project 11 132783451 132784411 - Pycr1 protein_coding retained_intron MGP_NODShiLtJ_T0028492.1 MGP_NODShiLtJ_G0018059.1 mouse_genomes_project 11 52989681 53002293 - MGP_NODShiLtJ_P0028492 Trim41 protein_coding protein_coding MGP_NODShiLtJ_T0028493.1 MGP_NODShiLtJ_G0018059.1 mouse_genomes_project 11 52991663 52995673 - MGP_NODShiLtJ_P0028493 Trim41 protein_coding protein_coding MGP_NODShiLtJ_T0028494.1 MGP_NODShiLtJ_G0018059.1 mouse_genomes_project 11 52992374 53001893 - MGP_NODShiLtJ_P0028494 Trim41 protein_coding protein_coding MGP_NODShiLtJ_T0028495.1 MGP_NODShiLtJ_G0018059.1 mouse_genomes_project 11 52992476 52999509 - MGP_NODShiLtJ_P0028495 Trim41 protein_coding protein_coding MGP_NODShiLtJ_T0033140.1 MGP_NODShiLtJ_G0019225.1 mouse_genomes_project 11 126627810 126641097 - MGP_NODShiLtJ_P0033140 protein_coding protein_coding MGP_NODShiLtJ_T0012507.1 MGP_NODShiLtJ_G0010615.1 mouse_genomes_project 11 64994908 64995213 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101558.1 MGP_NODShiLtJ_G0039728.1 mouse_genomes_project 11 91562227 91563055 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017052.1 MGP_NODShiLtJ_G0015032.1 mouse_genomes_project 11 30489707 30492358 - A630052C17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0032042.1 MGP_NODShiLtJ_G0018962.1 mouse_genomes_project 11 109527288 109527806 - MGP_NODShiLtJ_P0032042 Gm11555 protein_coding protein_coding MGP_NODShiLtJ_T0029215.1 MGP_NODShiLtJ_G0018268.1 mouse_genomes_project 11 65986855 66023800 + MGP_NODShiLtJ_P0029215 Gid4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029216.1 MGP_NODShiLtJ_G0018268.1 mouse_genomes_project 11 65986972 66018177 + MGP_NODShiLtJ_P0029216 Gid4 protein_coding protein_coding MGP_NODShiLtJ_T0012652.1 MGP_NODShiLtJ_G0010760.1 mouse_genomes_project 11 125205357 125205862 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030590.1 MGP_NODShiLtJ_G0018585.1 mouse_genomes_project 11 83915774 83939352 + MGP_NODShiLtJ_P0030590 Tusc5 protein_coding protein_coding MGP_NODShiLtJ_T0003119.1 MGP_NODShiLtJ_G0002893.1 mouse_genomes_project 11 60248071 60255285 - Slc36a1os antisense antisense MGP_NODShiLtJ_T0003120.1 MGP_NODShiLtJ_G0002893.1 mouse_genomes_project 11 60250695 60255467 - Slc36a1os antisense antisense MGP_NODShiLtJ_T0012659.1 MGP_NODShiLtJ_G0010767.1 mouse_genomes_project 11 127382562 127382631 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012452.1 MGP_NODShiLtJ_G0010560.1 mouse_genomes_project 11 44832159 44833072 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031341.1 MGP_NODShiLtJ_G0018771.1 mouse_genomes_project 11 96450663 96452712 + Cuedc1 protein_coding processed_transcript MGP_NODShiLtJ_T0031342.1 MGP_NODShiLtJ_G0018771.1 mouse_genomes_project 11 96451893 96545130 + Cuedc1 protein_coding retained_intron MGP_NODShiLtJ_T0031343.1 MGP_NODShiLtJ_G0018771.1 mouse_genomes_project 11 96519214 96554670 + MGP_NODShiLtJ_P0031343 Cuedc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031344.1 MGP_NODShiLtJ_G0018771.1 mouse_genomes_project 11 96525489 96554666 + MGP_NODShiLtJ_P0031344 Cuedc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031345.1 MGP_NODShiLtJ_G0018771.1 mouse_genomes_project 11 96542074 96543052 + Cuedc1 protein_coding retained_intron MGP_NODShiLtJ_T0031346.1 MGP_NODShiLtJ_G0018771.1 mouse_genomes_project 11 96546738 96549565 + Cuedc1 protein_coding processed_transcript MGP_NODShiLtJ_T0031347.1 MGP_NODShiLtJ_G0018771.1 mouse_genomes_project 11 96548571 96553517 + Cuedc1 protein_coding retained_intron MGP_NODShiLtJ_T0029450.1 MGP_NODShiLtJ_G0018313.1 mouse_genomes_project 11 68648655 68673841 + MGP_NODShiLtJ_P0029450 Trim16 protein_coding protein_coding MGP_NODShiLtJ_T0029451.1 MGP_NODShiLtJ_G0018313.1 mouse_genomes_project 11 68648677 68688320 + MGP_NODShiLtJ_P0029451 Trim16 protein_coding protein_coding MGP_NODShiLtJ_T0029452.1 MGP_NODShiLtJ_G0018313.1 mouse_genomes_project 11 68648864 68649673 + Trim16 protein_coding processed_transcript MGP_NODShiLtJ_T0029453.1 MGP_NODShiLtJ_G0018313.1 mouse_genomes_project 11 68648893 68673841 + MGP_NODShiLtJ_P0029453 Trim16 protein_coding protein_coding MGP_NODShiLtJ_T0029454.1 MGP_NODShiLtJ_G0018313.1 mouse_genomes_project 11 68664649 68672314 + Trim16 protein_coding processed_transcript MGP_NODShiLtJ_T0017167.1 MGP_NODShiLtJ_G0015096.1 mouse_genomes_project 11 132322608 132324392 - 2900052L18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0027544.1 MGP_NODShiLtJ_G0017831.1 mouse_genomes_project 11 1017056 1043521 - MGP_NODShiLtJ_P0027544 Sec14l2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0027545.1 MGP_NODShiLtJ_G0017831.1 mouse_genomes_project 11 1017793 1038695 - Sec14l2 protein_coding processed_transcript MGP_NODShiLtJ_T0027546.1 MGP_NODShiLtJ_G0017831.1 mouse_genomes_project 11 1017793 1029264 - Sec14l2 protein_coding processed_transcript MGP_NODShiLtJ_T0027547.1 MGP_NODShiLtJ_G0017831.1 mouse_genomes_project 11 1023181 1029013 - Sec14l2 protein_coding processed_transcript MGP_NODShiLtJ_T0027548.1 MGP_NODShiLtJ_G0017831.1 mouse_genomes_project 11 1031093 1043414 - Sec14l2 protein_coding processed_transcript MGP_NODShiLtJ_T0027549.1 MGP_NODShiLtJ_G0017831.1 mouse_genomes_project 11 1036455 1038752 - Sec14l2 protein_coding processed_transcript MGP_NODShiLtJ_T0017032.1 MGP_NODShiLtJ_G0015022.1 mouse_genomes_project 11 3947108 3951144 - Gm11981 processed_transcript processed_transcript MGP_NODShiLtJ_T0003284.1 MGP_NODShiLtJ_G0003026.1 mouse_genomes_project 11 120765081 120770727 + Gm11683 antisense antisense MGP_NODShiLtJ_T0031214.1 MGP_NODShiLtJ_G0018740.1 mouse_genomes_project 11 94695782 94719307 + MGP_NODShiLtJ_P0031214 Tubd1 protein_coding protein_coding MGP_NODShiLtJ_T0031215.1 MGP_NODShiLtJ_G0018740.1 mouse_genomes_project 11 94695782 94719308 + MGP_NODShiLtJ_P0031215 Tubd1 protein_coding protein_coding MGP_NODShiLtJ_T0031216.1 MGP_NODShiLtJ_G0018740.1 mouse_genomes_project 11 94695782 94719308 + MGP_NODShiLtJ_P0031216 Tubd1 protein_coding protein_coding MGP_NODShiLtJ_T0031217.1 MGP_NODShiLtJ_G0018740.1 mouse_genomes_project 11 94695782 94719308 + MGP_NODShiLtJ_P0031217 Tubd1 protein_coding protein_coding MGP_NODShiLtJ_T0031218.1 MGP_NODShiLtJ_G0018740.1 mouse_genomes_project 11 94705927 94719308 + MGP_NODShiLtJ_P0031218 Tubd1 protein_coding protein_coding MGP_NODShiLtJ_T0031033.1 MGP_NODShiLtJ_G0018695.1 mouse_genomes_project 11 91271877 91281575 + MGP_NODShiLtJ_P0031033 Rasl10b protein_coding protein_coding MGP_NODShiLtJ_T0031034.1 MGP_NODShiLtJ_G0018695.1 mouse_genomes_project 11 91272428 91283780 + MGP_NODShiLtJ_P0031034 Rasl10b protein_coding protein_coding MGP_NODShiLtJ_T0031035.1 MGP_NODShiLtJ_G0018695.1 mouse_genomes_project 11 91272428 91283778 + MGP_NODShiLtJ_P0031035 Rasl10b protein_coding protein_coding MGP_NODShiLtJ_T0031036.1 MGP_NODShiLtJ_G0018695.1 mouse_genomes_project 11 91272812 91283779 + MGP_NODShiLtJ_P0031036 Rasl10b protein_coding protein_coding MGP_NODShiLtJ_T0029163.1 MGP_NODShiLtJ_G0018261.1 mouse_genomes_project 11 65499411 65501181 - MGP_NODShiLtJ_P0029163 Rasd1 protein_coding protein_coding MGP_NODShiLtJ_T0012402.1 MGP_NODShiLtJ_G0010510.1 mouse_genomes_project 11 21474229 21474880 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028574.1 MGP_NODShiLtJ_G0018089.1 mouse_genomes_project 11 54274209 54288766 + Gfpt2 protein_coding retained_intron MGP_NODShiLtJ_T0028575.1 MGP_NODShiLtJ_G0018089.1 mouse_genomes_project 11 54274218 54319623 + MGP_NODShiLtJ_P0028575 Gfpt2 protein_coding protein_coding MGP_NODShiLtJ_T0099962.1 MGP_NODShiLtJ_G0038356.1 mouse_genomes_project 11 114624410 114624543 - Gm22743 snoRNA snoRNA MGP_NODShiLtJ_T0032183.1 MGP_NODShiLtJ_G0019022.1 mouse_genomes_project 11 110781792 110783652 - MGP_NODShiLtJ_P0032183 Hcrt protein_coding protein_coding MGP_NODShiLtJ_T0032184.1 MGP_NODShiLtJ_G0019022.1 mouse_genomes_project 11 110782414 110783655 - MGP_NODShiLtJ_P0032184 Hcrt protein_coding protein_coding MGP_NODShiLtJ_T0006267.1 MGP_NODShiLtJ_G0005222.1 mouse_genomes_project 11 107567914 107577323 + Gm11630 lincRNA lincRNA MGP_NODShiLtJ_T0028070.1 MGP_NODShiLtJ_G0017951.1 mouse_genomes_project 11 24256466 24283073 - MGP_NODShiLtJ_P0028070 A830031A19Rik protein_coding protein_coding MGP_NODShiLtJ_T0027588.1 MGP_NODShiLtJ_G0017841.1 mouse_genomes_project 11 1603108 1604690 + MGP_NODShiLtJ_P0027588 Gm11032 protein_coding protein_coding MGP_NODShiLtJ_T0017137.1 MGP_NODShiLtJ_G0015084.1 mouse_genomes_project 11 115876643 115905166 + Gm11638 processed_transcript processed_transcript MGP_NODShiLtJ_T0009671.1 MGP_NODShiLtJ_G0007804.1 mouse_genomes_project 11 118813834 118813903 + Mir7223 miRNA miRNA MGP_NODShiLtJ_T0028353.1 MGP_NODShiLtJ_G0018021.1 mouse_genomes_project 11 45521579 45603637 - MGP_NODShiLtJ_P0028353 Gabra1 protein_coding protein_coding MGP_NODShiLtJ_T0028354.1 MGP_NODShiLtJ_G0018021.1 mouse_genomes_project 11 45521579 45602870 - MGP_NODShiLtJ_P0028354 Gabra1 protein_coding protein_coding MGP_NODShiLtJ_T0028355.1 MGP_NODShiLtJ_G0018021.1 mouse_genomes_project 11 45526160 45600190 - MGP_NODShiLtJ_P0028355 Gabra1 protein_coding protein_coding MGP_NODShiLtJ_T0028356.1 MGP_NODShiLtJ_G0018021.1 mouse_genomes_project 11 45550872 45600303 - MGP_NODShiLtJ_P0028356 Gabra1 protein_coding protein_coding MGP_NODShiLtJ_T0028357.1 MGP_NODShiLtJ_G0018021.1 mouse_genomes_project 11 45595910 45603637 - MGP_NODShiLtJ_P0028357 Gabra1 protein_coding protein_coding MGP_NODShiLtJ_T0028358.1 MGP_NODShiLtJ_G0018021.1 mouse_genomes_project 11 45597986 45603167 - Gabra1 protein_coding processed_transcript MGP_NODShiLtJ_T0028359.1 MGP_NODShiLtJ_G0018021.1 mouse_genomes_project 11 45599906 45603617 - MGP_NODShiLtJ_P0028359 Gabra1 protein_coding protein_coding MGP_NODShiLtJ_T0030018.1 MGP_NODShiLtJ_G0018441.1 mouse_genomes_project 11 76925691 76942823 - MGP_NODShiLtJ_P0030018 Pelp1 protein_coding protein_coding MGP_NODShiLtJ_T0030019.1 MGP_NODShiLtJ_G0018441.1 mouse_genomes_project 11 76935427 76942826 - MGP_NODShiLtJ_P0030019 Pelp1 protein_coding protein_coding MGP_NODShiLtJ_T0028857.1 MGP_NODShiLtJ_G0018160.1 mouse_genomes_project 11 58878227 58920093 - MGP_NODShiLtJ_P0028857 Slc22a21 protein_coding protein_coding MGP_NODShiLtJ_T0028858.1 MGP_NODShiLtJ_G0018160.1 mouse_genomes_project 11 58893830 58909840 - MGP_NODShiLtJ_P0028858 Slc22a21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028205.1 MGP_NODShiLtJ_G0017980.1 mouse_genomes_project 11 33629449 33648772 + MGP_NODShiLtJ_P0028205 4930524B15Rik protein_coding protein_coding MGP_NODShiLtJ_T0032725.1 MGP_NODShiLtJ_G0019129.1 mouse_genomes_project 11 114911140 114962623 - MGP_NODShiLtJ_P0032725 Cdc27 protein_coding protein_coding MGP_NODShiLtJ_T0032726.1 MGP_NODShiLtJ_G0019129.1 mouse_genomes_project 11 114913335 114962532 - MGP_NODShiLtJ_P0032726 Cdc27 protein_coding protein_coding MGP_NODShiLtJ_T0032727.1 MGP_NODShiLtJ_G0019129.1 mouse_genomes_project 11 114916745 114921647 - Cdc27 protein_coding processed_transcript MGP_NODShiLtJ_T0032728.1 MGP_NODShiLtJ_G0019129.1 mouse_genomes_project 11 114928698 114962618 - MGP_NODShiLtJ_P0032728 Cdc27 protein_coding protein_coding MGP_NODShiLtJ_T0032729.1 MGP_NODShiLtJ_G0019129.1 mouse_genomes_project 11 114940553 114962760 - Cdc27 protein_coding processed_transcript MGP_NODShiLtJ_T0009650.1 MGP_NODShiLtJ_G0007783.1 mouse_genomes_project 11 107402016 107402155 + Mir8102 miRNA miRNA MGP_NODShiLtJ_T0012514.1 MGP_NODShiLtJ_G0010622.1 mouse_genomes_project 11 66780499 66781216 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028444.1 MGP_NODShiLtJ_G0018044.1 mouse_genomes_project 11 50100413 50123314 - MGP_NODShiLtJ_P0028444 Nipal4 protein_coding protein_coding MGP_NODShiLtJ_T0027712.1 MGP_NODShiLtJ_G0017868.1 mouse_genomes_project 11 3034070 3036215 - MGP_NODShiLtJ_P0027712 Myl7 protein_coding protein_coding MGP_NODShiLtJ_T0017041.1 MGP_NODShiLtJ_G0015025.1 mouse_genomes_project 11 18255513 18263633 - 8430419K02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017042.1 MGP_NODShiLtJ_G0015025.1 mouse_genomes_project 11 18255617 18278781 - 8430419K02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0032913.1 MGP_NODShiLtJ_G0019171.1 mouse_genomes_project 11 117886367 117910422 - MGP_NODShiLtJ_P0032913 Nol11 protein_coding protein_coding MGP_NODShiLtJ_T0032914.1 MGP_NODShiLtJ_G0019171.1 mouse_genomes_project 11 117886367 117910422 - MGP_NODShiLtJ_P0032914 Nol11 protein_coding protein_coding MGP_NODShiLtJ_T0032915.1 MGP_NODShiLtJ_G0019171.1 mouse_genomes_project 11 117887064 117888138 - Nol11 protein_coding processed_transcript MGP_NODShiLtJ_T0032916.1 MGP_NODShiLtJ_G0019171.1 mouse_genomes_project 11 117898911 117905026 - Nol11 protein_coding processed_transcript MGP_NODShiLtJ_T0032917.1 MGP_NODShiLtJ_G0019171.1 mouse_genomes_project 11 117906744 117910393 - Nol11 protein_coding processed_transcript MGP_NODShiLtJ_T0031562.1 MGP_NODShiLtJ_G0018826.1 mouse_genomes_project 11 104441475 104467674 - MGP_NODShiLtJ_P0031562 Itga3 protein_coding protein_coding MGP_NODShiLtJ_T0031563.1 MGP_NODShiLtJ_G0018826.1 mouse_genomes_project 11 104441475 104475183 - MGP_NODShiLtJ_P0031563 Itga3 protein_coding protein_coding MGP_NODShiLtJ_T0031564.1 MGP_NODShiLtJ_G0018826.1 mouse_genomes_project 11 104441475 104475270 - MGP_NODShiLtJ_P0031564 Itga3 protein_coding protein_coding MGP_NODShiLtJ_T0031565.1 MGP_NODShiLtJ_G0018826.1 mouse_genomes_project 11 104450229 104454061 - Itga3 protein_coding retained_intron MGP_NODShiLtJ_T0031566.1 MGP_NODShiLtJ_G0018826.1 mouse_genomes_project 11 104456130 104459986 - Itga3 protein_coding retained_intron MGP_NODShiLtJ_T0031567.1 MGP_NODShiLtJ_G0018826.1 mouse_genomes_project 11 104460878 104475266 - MGP_NODShiLtJ_P0031567 Itga3 protein_coding protein_coding MGP_NODShiLtJ_T0027871.1 MGP_NODShiLtJ_G0017905.1 mouse_genomes_project 11 9963335 10025943 - MGP_NODShiLtJ_P0027871 Grb10 protein_coding protein_coding MGP_NODShiLtJ_T0027872.1 MGP_NODShiLtJ_G0017905.1 mouse_genomes_project 11 9969496 9971395 - Grb10 protein_coding processed_transcript MGP_NODShiLtJ_T0027873.1 MGP_NODShiLtJ_G0017905.1 mouse_genomes_project 11 9977674 9979113 - Grb10 protein_coding processed_transcript MGP_NODShiLtJ_T0027874.1 MGP_NODShiLtJ_G0017905.1 mouse_genomes_project 11 9982382 9988832 - Grb10 protein_coding processed_transcript MGP_NODShiLtJ_T0027875.1 MGP_NODShiLtJ_G0017905.1 mouse_genomes_project 11 9987556 10073879 - MGP_NODShiLtJ_P0027875 Grb10 protein_coding protein_coding MGP_NODShiLtJ_T0027876.1 MGP_NODShiLtJ_G0017905.1 mouse_genomes_project 11 10001073 10061075 - MGP_NODShiLtJ_P0027876 Grb10 protein_coding protein_coding MGP_NODShiLtJ_T0027877.1 MGP_NODShiLtJ_G0017905.1 mouse_genomes_project 11 10001167 10061483 - MGP_NODShiLtJ_P0027877 Grb10 protein_coding protein_coding MGP_NODShiLtJ_T0029093.1 MGP_NODShiLtJ_G0018241.1 mouse_genomes_project 11 64673036 64681049 - MGP_NODShiLtJ_P0029093 Guk1 protein_coding protein_coding MGP_NODShiLtJ_T0029094.1 MGP_NODShiLtJ_G0018241.1 mouse_genomes_project 11 64673208 64676892 - MGP_NODShiLtJ_P0029094 Guk1 protein_coding protein_coding MGP_NODShiLtJ_T0029095.1 MGP_NODShiLtJ_G0018241.1 mouse_genomes_project 11 64673271 64674606 - Guk1 protein_coding retained_intron MGP_NODShiLtJ_T0029096.1 MGP_NODShiLtJ_G0018241.1 mouse_genomes_project 11 64673317 64674010 - Guk1 protein_coding retained_intron MGP_NODShiLtJ_T0029097.1 MGP_NODShiLtJ_G0018241.1 mouse_genomes_project 11 64675332 64680909 - Guk1 protein_coding retained_intron MGP_NODShiLtJ_T0029098.1 MGP_NODShiLtJ_G0018241.1 mouse_genomes_project 11 64675942 64681316 - MGP_NODShiLtJ_P0029098 Guk1 protein_coding protein_coding MGP_NODShiLtJ_T0030298.1 MGP_NODShiLtJ_G0018498.1 mouse_genomes_project 11 79829994 79875264 + MGP_NODShiLtJ_P0030298 Ncbp3 protein_coding protein_coding MGP_NODShiLtJ_T0030299.1 MGP_NODShiLtJ_G0018498.1 mouse_genomes_project 11 79830081 79840773 + Ncbp3 protein_coding retained_intron MGP_NODShiLtJ_T0030300.1 MGP_NODShiLtJ_G0018498.1 mouse_genomes_project 11 79830084 79838911 + Ncbp3 protein_coding retained_intron MGP_NODShiLtJ_T0033676.1 MGP_NODShiLtJ_G0019329.1 mouse_genomes_project 11 131035781 131045234 + MGP_NODShiLtJ_P0033676 Cbx2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033677.1 MGP_NODShiLtJ_G0019329.1 mouse_genomes_project 11 131036917 131045226 + MGP_NODShiLtJ_P0033677 Cbx2 protein_coding protein_coding MGP_NODShiLtJ_T0033678.1 MGP_NODShiLtJ_G0019329.1 mouse_genomes_project 11 131037680 131041994 + Cbx2 protein_coding processed_transcript MGP_NODShiLtJ_T0003116.1 MGP_NODShiLtJ_G0002890.1 mouse_genomes_project 11 59729188 59735153 + Gm12227 antisense antisense MGP_NODShiLtJ_T0003233.1 MGP_NODShiLtJ_G0002985.1 mouse_genomes_project 11 108568182 108580545 - Gm12359 antisense antisense MGP_NODShiLtJ_T0003234.1 MGP_NODShiLtJ_G0002985.1 mouse_genomes_project 11 108568784 108580545 - Gm12359 antisense antisense MGP_NODShiLtJ_T0003235.1 MGP_NODShiLtJ_G0002985.1 mouse_genomes_project 11 108575132 108580516 - Gm12359 antisense antisense MGP_NODShiLtJ_T0003095.1 MGP_NODShiLtJ_G0002870.1 mouse_genomes_project 11 46905983 46908650 - Gm12144 antisense antisense MGP_NODShiLtJ_T0031424.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103071922 103109035 + MGP_NODShiLtJ_P0031424 Mbtd1 protein_coding protein_coding MGP_NODShiLtJ_T0031425.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103072162 103109045 + Mbtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0031426.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103072263 103095646 + Mbtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0031427.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103072264 103097107 + Mbtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0031428.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103072937 103117819 + MGP_NODShiLtJ_P0031428 Mbtd1 protein_coding protein_coding MGP_NODShiLtJ_T0031429.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103091913 103131922 + MGP_NODShiLtJ_P0031429 Mbtd1 protein_coding protein_coding MGP_NODShiLtJ_T0031430.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103096691 103099059 + Mbtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0031431.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103099053 103120517 + Mbtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0031432.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103105315 103119833 + Mbtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0031433.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103110626 103113878 + Mbtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0031434.1 MGP_NODShiLtJ_G0018795.1 mouse_genomes_project 11 103113098 103125240 + Mbtd1 protein_coding processed_transcript MGP_NODShiLtJ_T0029684.1 MGP_NODShiLtJ_G0018369.1 mouse_genomes_project 11 75474677 75478315 + MGP_NODShiLtJ_P0029684 Hes7 protein_coding protein_coding MGP_NODShiLtJ_T0003126.1 MGP_NODShiLtJ_G0002899.1 mouse_genomes_project 11 64338883 64340722 + Gm12256 antisense antisense MGP_NODShiLtJ_T0006112.1 MGP_NODShiLtJ_G0005100.1 mouse_genomes_project 11 17445690 17453380 + Gm12018 lincRNA lincRNA MGP_NODShiLtJ_T0017122.1 MGP_NODShiLtJ_G0015071.1 mouse_genomes_project 11 106641112 106643859 - Gm11574 processed_transcript processed_transcript MGP_NODShiLtJ_T0003158.1 MGP_NODShiLtJ_G0002925.1 mouse_genomes_project 11 73386588 73390945 - 9430073C21Rik antisense antisense MGP_NODShiLtJ_T0028506.1 MGP_NODShiLtJ_G0018063.1 mouse_genomes_project 11 53110558 53134964 - MGP_NODShiLtJ_P0028506 protein_coding protein_coding MGP_NODShiLtJ_T0028507.1 MGP_NODShiLtJ_G0018063.1 mouse_genomes_project 11 53124760 53134984 - protein_coding processed_transcript MGP_NODShiLtJ_T0006188.1 MGP_NODShiLtJ_G0005167.1 mouse_genomes_project 11 67686359 67688181 + Gm12273 lincRNA lincRNA MGP_NODShiLtJ_T0028143.1 MGP_NODShiLtJ_G0017966.1 mouse_genomes_project 11 30934792 30974347 + MGP_NODShiLtJ_P0028143 Clhc1 protein_coding protein_coding MGP_NODShiLtJ_T0028144.1 MGP_NODShiLtJ_G0017966.1 mouse_genomes_project 11 30950833 30974326 + Clhc1 protein_coding processed_transcript MGP_NODShiLtJ_T0028145.1 MGP_NODShiLtJ_G0017966.1 mouse_genomes_project 11 30950850 30974184 + Clhc1 protein_coding processed_transcript MGP_NODShiLtJ_T0033049.1 MGP_NODShiLtJ_G0019201.1 mouse_genomes_project 11 122180652 122194374 + MGP_NODShiLtJ_P0033049 Kcnj2 protein_coding protein_coding MGP_NODShiLtJ_T0009569.1 MGP_NODShiLtJ_G0007702.1 mouse_genomes_project 11 26676716 26676825 + Mir6372 miRNA miRNA MGP_NODShiLtJ_T0028803.1 MGP_NODShiLtJ_G0018145.1 mouse_genomes_project 11 58334284 58336558 - MGP_NODShiLtJ_P0028803 Gm10447 protein_coding protein_coding MGP_NODShiLtJ_T0098735.1 MGP_NODShiLtJ_G0037129.1 mouse_genomes_project 11 119962752 119962859 - Gm24149 snRNA snRNA MGP_NODShiLtJ_T0012398.1 MGP_NODShiLtJ_G0010506.1 mouse_genomes_project 11 20995014 20995315 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101543.1 MGP_NODShiLtJ_G0039713.1 mouse_genomes_project 11 55522018 55523019 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012424.1 MGP_NODShiLtJ_G0010532.1 mouse_genomes_project 11 31293653 31294125 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012343.1 MGP_NODShiLtJ_G0010451.1 mouse_genomes_project 11 1925761 1926255 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027902.1 MGP_NODShiLtJ_G0017910.1 mouse_genomes_project 11 16209278 16212351 + MGP_NODShiLtJ_P0027902 Fbxo48 protein_coding protein_coding MGP_NODShiLtJ_T0027903.1 MGP_NODShiLtJ_G0017910.1 mouse_genomes_project 11 16209313 16216118 + MGP_NODShiLtJ_P0027903 Fbxo48 protein_coding protein_coding MGP_NODShiLtJ_T0029971.1 MGP_NODShiLtJ_G0018430.1 mouse_genomes_project 11 76607216 76615524 + MGP_NODShiLtJ_P0029971 Mgl2 protein_coding protein_coding MGP_NODShiLtJ_T0029972.1 MGP_NODShiLtJ_G0018430.1 mouse_genomes_project 11 76607297 76611401 + Mgl2 protein_coding processed_transcript MGP_NODShiLtJ_T0029973.1 MGP_NODShiLtJ_G0018430.1 mouse_genomes_project 11 76607311 76615522 + MGP_NODShiLtJ_P0029973 Mgl2 protein_coding protein_coding MGP_NODShiLtJ_T0027806.1 MGP_NODShiLtJ_G0017889.1 mouse_genomes_project 11 4378614 4491609 + MGP_NODShiLtJ_P0027806 Adcy1 protein_coding protein_coding MGP_NODShiLtJ_T0027807.1 MGP_NODShiLtJ_G0017889.1 mouse_genomes_project 11 4472985 4485982 + Adcy1 protein_coding processed_transcript MGP_NODShiLtJ_T0012535.1 MGP_NODShiLtJ_G0010643.1 mouse_genomes_project 11 76879342 76879986 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033423.1 MGP_NODShiLtJ_G0019278.1 mouse_genomes_project 11 128006091 128035205 - Srp68 protein_coding processed_transcript MGP_NODShiLtJ_T0033424.1 MGP_NODShiLtJ_G0019278.1 mouse_genomes_project 11 128006091 128035205 - MGP_NODShiLtJ_P0033424 Srp68 protein_coding protein_coding MGP_NODShiLtJ_T0033425.1 MGP_NODShiLtJ_G0019278.1 mouse_genomes_project 11 128006091 128035123 - MGP_NODShiLtJ_P0033425 Srp68 protein_coding protein_coding MGP_NODShiLtJ_T0033426.1 MGP_NODShiLtJ_G0019278.1 mouse_genomes_project 11 128009721 128022257 - Srp68 protein_coding processed_transcript MGP_NODShiLtJ_T0099966.1 MGP_NODShiLtJ_G0038360.1 mouse_genomes_project 11 127458115 127458250 + Gm23699 snoRNA snoRNA MGP_NODShiLtJ_T0032066.1 MGP_NODShiLtJ_G0018986.1 mouse_genomes_project 11 109954209 109954970 - MGP_NODShiLtJ_P0032066 Krtap17-1 protein_coding protein_coding MGP_NODShiLtJ_T0098675.1 MGP_NODShiLtJ_G0037069.1 mouse_genomes_project 11 30670737 30670863 + Gm23109 snRNA snRNA MGP_NODShiLtJ_T0099939.1 MGP_NODShiLtJ_G0038333.1 mouse_genomes_project 11 78547247 78547378 - Gm22927 snoRNA snoRNA MGP_NODShiLtJ_T0099931.1 MGP_NODShiLtJ_G0038325.1 mouse_genomes_project 11 68407522 68407594 + Snord49a snoRNA snoRNA MGP_NODShiLtJ_T0011200.1 MGP_NODShiLtJ_G0009333.1 mouse_genomes_project 11 104352549 104352665 + Gm24877 misc_RNA misc_RNA MGP_NODShiLtJ_T0006260.1 MGP_NODShiLtJ_G0005219.1 mouse_genomes_project 11 105704707 105705960 + Gm11535 lincRNA lincRNA MGP_NODShiLtJ_T0006131.1 MGP_NODShiLtJ_G0005118.1 mouse_genomes_project 11 24663154 24998117 + lincRNA lincRNA MGP_NODShiLtJ_T0028416.1 MGP_NODShiLtJ_G0018037.1 mouse_genomes_project 11 48369471 48419374 + MGP_NODShiLtJ_P0028416 Rnf145 protein_coding protein_coding MGP_NODShiLtJ_T0028417.1 MGP_NODShiLtJ_G0018037.1 mouse_genomes_project 11 48369490 48378293 + Rnf145 protein_coding processed_transcript MGP_NODShiLtJ_T0028418.1 MGP_NODShiLtJ_G0018037.1 mouse_genomes_project 11 48369916 48409044 + MGP_NODShiLtJ_P0028418 Rnf145 protein_coding protein_coding MGP_NODShiLtJ_T0028419.1 MGP_NODShiLtJ_G0018037.1 mouse_genomes_project 11 48370779 48402995 + Rnf145 protein_coding processed_transcript MGP_NODShiLtJ_T0028420.1 MGP_NODShiLtJ_G0018037.1 mouse_genomes_project 11 48410681 48413878 + Rnf145 protein_coding processed_transcript MGP_NODShiLtJ_T0028421.1 MGP_NODShiLtJ_G0018037.1 mouse_genomes_project 11 48413859 48415818 + Rnf145 protein_coding processed_transcript MGP_NODShiLtJ_T0029484.1 MGP_NODShiLtJ_G0018324.1 mouse_genomes_project 11 71015825 71189025 - MGP_NODShiLtJ_P0029484 Arhgap44 protein_coding protein_coding MGP_NODShiLtJ_T0029485.1 MGP_NODShiLtJ_G0018324.1 mouse_genomes_project 11 71015826 71188968 - MGP_NODShiLtJ_P0029485 Arhgap44 protein_coding protein_coding MGP_NODShiLtJ_T0029486.1 MGP_NODShiLtJ_G0018324.1 mouse_genomes_project 11 71019286 71188706 - MGP_NODShiLtJ_P0029486 Arhgap44 protein_coding protein_coding MGP_NODShiLtJ_T0029487.1 MGP_NODShiLtJ_G0018324.1 mouse_genomes_project 11 71068654 71188635 - MGP_NODShiLtJ_P0029487 Arhgap44 protein_coding protein_coding MGP_NODShiLtJ_T0028349.1 MGP_NODShiLtJ_G0018020.1 mouse_genomes_project 11 45216442 45346075 - MGP_NODShiLtJ_P0028349 Gabrg2 protein_coding protein_coding MGP_NODShiLtJ_T0028350.1 MGP_NODShiLtJ_G0018020.1 mouse_genomes_project 11 45217986 45345749 - MGP_NODShiLtJ_P0028350 Gabrg2 protein_coding protein_coding MGP_NODShiLtJ_T0028351.1 MGP_NODShiLtJ_G0018020.1 mouse_genomes_project 11 45217988 45224223 - Gabrg2 protein_coding retained_intron MGP_NODShiLtJ_T0028352.1 MGP_NODShiLtJ_G0018020.1 mouse_genomes_project 11 45222166 45345573 - MGP_NODShiLtJ_P0028352 Gabrg2 protein_coding protein_coding MGP_NODShiLtJ_T0027597.1 MGP_NODShiLtJ_G0017845.1 mouse_genomes_project 11 1728437 1739183 - MGP_NODShiLtJ_P0027597 Cabp7 protein_coding protein_coding MGP_NODShiLtJ_T0028173.1 MGP_NODShiLtJ_G0017971.1 mouse_genomes_project 11 32036089 32187124 - MGP_NODShiLtJ_P0028173 Acyp2 protein_coding protein_coding MGP_NODShiLtJ_T0027878.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10264253 10519814 - MGP_NODShiLtJ_P0027878 Cobl protein_coding protein_coding MGP_NODShiLtJ_T0027879.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10264321 10519967 - MGP_NODShiLtJ_P0027879 Cobl protein_coding protein_coding MGP_NODShiLtJ_T0027880.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10264321 10519869 - MGP_NODShiLtJ_P0027880 Cobl protein_coding protein_coding MGP_NODShiLtJ_T0027881.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10264323 10457179 - MGP_NODShiLtJ_P0027881 Cobl protein_coding protein_coding MGP_NODShiLtJ_T0027882.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10264323 10519970 - MGP_NODShiLtJ_P0027882 Cobl protein_coding protein_coding MGP_NODShiLtJ_T0027883.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10264756 10519810 - MGP_NODShiLtJ_P0027883 Cobl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027884.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10304155 10410360 - MGP_NODShiLtJ_P0027884 Cobl protein_coding protein_coding MGP_NODShiLtJ_T0027885.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10334505 10410308 - MGP_NODShiLtJ_P0027885 Cobl protein_coding protein_coding MGP_NODShiLtJ_T0027886.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10342923 10519762 - Cobl protein_coding retained_intron MGP_NODShiLtJ_T0027887.1 MGP_NODShiLtJ_G0017906.1 mouse_genomes_project 11 10383742 10422765 - MGP_NODShiLtJ_P0027887 Cobl protein_coding protein_coding MGP_NODShiLtJ_T0012641.1 MGP_NODShiLtJ_G0010749.1 mouse_genomes_project 11 117892318 117892651 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027843.1 MGP_NODShiLtJ_G0017900.1 mouse_genomes_project 11 9158983 9387301 - MGP_NODShiLtJ_P0027843 Zpbp protein_coding protein_coding MGP_NODShiLtJ_T0027844.1 MGP_NODShiLtJ_G0017900.1 mouse_genomes_project 11 9317760 9387083 - MGP_NODShiLtJ_P0027844 Zpbp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028000.1 MGP_NODShiLtJ_G0017938.1 mouse_genomes_project 11 22888369 22980363 - MGP_NODShiLtJ_P0028000 protein_coding protein_coding MGP_NODShiLtJ_T0028001.1 MGP_NODShiLtJ_G0017938.1 mouse_genomes_project 11 22891992 22980233 - MGP_NODShiLtJ_P0028001 protein_coding protein_coding MGP_NODShiLtJ_T0028002.1 MGP_NODShiLtJ_G0017938.1 mouse_genomes_project 11 22891997 22976977 - MGP_NODShiLtJ_P0028002 protein_coding protein_coding MGP_NODShiLtJ_T0028003.1 MGP_NODShiLtJ_G0017938.1 mouse_genomes_project 11 22892068 22954202 - protein_coding retained_intron MGP_NODShiLtJ_T0028004.1 MGP_NODShiLtJ_G0017938.1 mouse_genomes_project 11 22892256 22970868 - protein_coding processed_transcript MGP_NODShiLtJ_T0028005.1 MGP_NODShiLtJ_G0017938.1 mouse_genomes_project 11 22953406 22980165 - MGP_NODShiLtJ_P0028005 protein_coding protein_coding MGP_NODShiLtJ_T0029555.1 MGP_NODShiLtJ_G0018343.1 mouse_genomes_project 11 74022042 74040762 + MGP_NODShiLtJ_P0029555 Gsg1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029556.1 MGP_NODShiLtJ_G0018343.1 mouse_genomes_project 11 74028391 74035004 + MGP_NODShiLtJ_P0029556 Gsg1l2 protein_coding protein_coding MGP_NODShiLtJ_T0009613.1 MGP_NODShiLtJ_G0007746.1 mouse_genomes_project 11 76971043 76971107 + Mir7115 miRNA miRNA MGP_NODShiLtJ_T0028523.1 MGP_NODShiLtJ_G0018072.1 mouse_genomes_project 11 53492348 53499224 + MGP_NODShiLtJ_P0028523 Olfr1395 protein_coding protein_coding MGP_NODShiLtJ_T0028524.1 MGP_NODShiLtJ_G0018072.1 mouse_genomes_project 11 53498270 53499224 + MGP_NODShiLtJ_P0028524 Olfr1395 protein_coding protein_coding MGP_NODShiLtJ_T0012338.1 MGP_NODShiLtJ_G0010446.1 mouse_genomes_project 11 514875 515724 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033549.1 MGP_NODShiLtJ_G0019301.1 mouse_genomes_project 11 128747961 128821627 + MGP_NODShiLtJ_P0033549 Mgat5b protein_coding protein_coding MGP_NODShiLtJ_T0033550.1 MGP_NODShiLtJ_G0019301.1 mouse_genomes_project 11 128782087 128808963 + Mgat5b protein_coding processed_transcript MGP_NODShiLtJ_T0033551.1 MGP_NODShiLtJ_G0019301.1 mouse_genomes_project 11 128801546 128813055 + MGP_NODShiLtJ_P0033551 Mgat5b protein_coding protein_coding MGP_NODShiLtJ_T0033552.1 MGP_NODShiLtJ_G0019301.1 mouse_genomes_project 11 128807728 128821619 + Mgat5b protein_coding retained_intron MGP_NODShiLtJ_T0028477.1 MGP_NODShiLtJ_G0018055.1 mouse_genomes_project 11 50750363 50778439 + MGP_NODShiLtJ_P0028477 Havcr1 protein_coding protein_coding MGP_NODShiLtJ_T0028478.1 MGP_NODShiLtJ_G0018055.1 mouse_genomes_project 11 50760888 50796735 + MGP_NODShiLtJ_P0028478 Havcr1 protein_coding protein_coding MGP_NODShiLtJ_T0028479.1 MGP_NODShiLtJ_G0018055.1 mouse_genomes_project 11 50772718 50796733 + MGP_NODShiLtJ_P0028479 Havcr1 protein_coding protein_coding MGP_NODShiLtJ_T0028480.1 MGP_NODShiLtJ_G0018055.1 mouse_genomes_project 11 50773373 50796735 + MGP_NODShiLtJ_P0028480 Havcr1 protein_coding protein_coding MGP_NODShiLtJ_T0099929.1 MGP_NODShiLtJ_G0038323.1 mouse_genomes_project 11 66435966 66436092 + Gm24945 snoRNA snoRNA MGP_NODShiLtJ_T0032344.1 MGP_NODShiLtJ_G0019058.1 mouse_genomes_project 11 111592163 111598786 + Rnd2 protein_coding processed_transcript MGP_NODShiLtJ_T0032345.1 MGP_NODShiLtJ_G0019058.1 mouse_genomes_project 11 111592648 111598038 + Rnd2 protein_coding processed_transcript MGP_NODShiLtJ_T0032346.1 MGP_NODShiLtJ_G0019058.1 mouse_genomes_project 11 111595339 111598786 + MGP_NODShiLtJ_P0032346 Rnd2 protein_coding protein_coding MGP_NODShiLtJ_T0028560.1 MGP_NODShiLtJ_G0018081.1 mouse_genomes_project 11 53870948 53871884 + MGP_NODShiLtJ_P0028560 Olfr1388 protein_coding protein_coding MGP_NODShiLtJ_T0012628.1 MGP_NODShiLtJ_G0010736.1 mouse_genomes_project 11 112926315 112927113 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030534.1 MGP_NODShiLtJ_G0018574.1 mouse_genomes_project 11 83207764 83217647 - MGP_NODShiLtJ_P0030534 Fam101b protein_coding protein_coding MGP_NODShiLtJ_T0030345.1 MGP_NODShiLtJ_G0018516.1 mouse_genomes_project 11 80339678 80340617 - MGP_NODShiLtJ_P0030345 Olfr382 protein_coding protein_coding MGP_NODShiLtJ_T0033507.1 MGP_NODShiLtJ_G0019294.1 mouse_genomes_project 11 128465023 128485909 - MGP_NODShiLtJ_P0033507 St6galnac2 protein_coding protein_coding MGP_NODShiLtJ_T0033508.1 MGP_NODShiLtJ_G0019294.1 mouse_genomes_project 11 128465623 128469413 - St6galnac2 protein_coding processed_transcript MGP_NODShiLtJ_T0033509.1 MGP_NODShiLtJ_G0019294.1 mouse_genomes_project 11 128467216 128471025 - St6galnac2 protein_coding processed_transcript MGP_NODShiLtJ_T0033510.1 MGP_NODShiLtJ_G0019294.1 mouse_genomes_project 11 128471422 128474556 - St6galnac2 protein_coding processed_transcript MGP_NODShiLtJ_T0033511.1 MGP_NODShiLtJ_G0019294.1 mouse_genomes_project 11 128474655 128475657 - St6galnac2 protein_coding processed_transcript MGP_NODShiLtJ_T0033512.1 MGP_NODShiLtJ_G0019294.1 mouse_genomes_project 11 128479530 128485650 - St6galnac2 protein_coding processed_transcript MGP_NODShiLtJ_T0028248.1 MGP_NODShiLtJ_G0017987.1 mouse_genomes_project 11 33972832 33974539 + MGP_NODShiLtJ_P0028248 Hba-x protein_coding protein_coding MGP_NODShiLtJ_T0028249.1 MGP_NODShiLtJ_G0017987.1 mouse_genomes_project 11 33973325 33974539 + MGP_NODShiLtJ_P0028249 Hba-x protein_coding protein_coding MGP_NODShiLtJ_T0032650.1 MGP_NODShiLtJ_G0019111.1 mouse_genomes_project 11 113462322 113492610 + MGP_NODShiLtJ_P0032650 Fmnl1 protein_coding protein_coding MGP_NODShiLtJ_T0032651.1 MGP_NODShiLtJ_G0019111.1 mouse_genomes_project 11 113462528 113492604 + MGP_NODShiLtJ_P0032651 Fmnl1 protein_coding protein_coding MGP_NODShiLtJ_T0032652.1 MGP_NODShiLtJ_G0019111.1 mouse_genomes_project 11 113462528 113492617 + MGP_NODShiLtJ_P0032652 Fmnl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0032653.1 MGP_NODShiLtJ_G0019111.1 mouse_genomes_project 11 113471982 113484095 + Fmnl1 protein_coding processed_transcript MGP_NODShiLtJ_T0032654.1 MGP_NODShiLtJ_G0019111.1 mouse_genomes_project 11 113478953 113484385 + Fmnl1 protein_coding processed_transcript MGP_NODShiLtJ_T0032655.1 MGP_NODShiLtJ_G0019111.1 mouse_genomes_project 11 113486042 113492604 + Fmnl1 protein_coding retained_intron MGP_NODShiLtJ_T0032656.1 MGP_NODShiLtJ_G0019111.1 mouse_genomes_project 11 113490531 113491607 + MGP_NODShiLtJ_P0032656 Fmnl1 protein_coding protein_coding MGP_NODShiLtJ_T0031354.1 MGP_NODShiLtJ_G0018774.1 mouse_genomes_project 11 96721228 97116916 - MGP_NODShiLtJ_P0031354 Msi2 protein_coding protein_coding MGP_NODShiLtJ_T0031355.1 MGP_NODShiLtJ_G0018774.1 mouse_genomes_project 11 96727106 97116864 - MGP_NODShiLtJ_P0031355 Msi2 protein_coding protein_coding MGP_NODShiLtJ_T0031356.1 MGP_NODShiLtJ_G0018774.1 mouse_genomes_project 11 96749826 96985476 - Msi2 protein_coding retained_intron MGP_NODShiLtJ_T0031357.1 MGP_NODShiLtJ_G0018774.1 mouse_genomes_project 11 96869340 97116873 - Msi2 protein_coding retained_intron MGP_NODShiLtJ_T0031358.1 MGP_NODShiLtJ_G0018774.1 mouse_genomes_project 11 96985383 97118186 - MGP_NODShiLtJ_P0031358 Msi2 protein_coding protein_coding MGP_NODShiLtJ_T0017164.1 MGP_NODShiLtJ_G0015094.1 mouse_genomes_project 11 132241126 132242906 + Gm11769 processed_transcript processed_transcript MGP_NODShiLtJ_T0028292.1 MGP_NODShiLtJ_G0018005.1 mouse_genomes_project 11 35966156 36012053 + MGP_NODShiLtJ_P0028292 Lcp2 protein_coding protein_coding MGP_NODShiLtJ_T0028293.1 MGP_NODShiLtJ_G0018005.1 mouse_genomes_project 11 35966342 36013090 + MGP_NODShiLtJ_P0028293 Lcp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028294.1 MGP_NODShiLtJ_G0018005.1 mouse_genomes_project 11 36000052 36000526 + Lcp2 protein_coding processed_transcript MGP_NODShiLtJ_T0028295.1 MGP_NODShiLtJ_G0018005.1 mouse_genomes_project 11 36008860 36012582 + Lcp2 protein_coding processed_transcript MGP_NODShiLtJ_T0006269.1 MGP_NODShiLtJ_G0005224.1 mouse_genomes_project 11 110285219 110287260 + Gm12349 lincRNA lincRNA MGP_NODShiLtJ_T0031182.1 MGP_NODShiLtJ_G0018733.1 mouse_genomes_project 11 93944315 93949344 - MGP_NODShiLtJ_P0031182 Gm11444 protein_coding protein_coding MGP_NODShiLtJ_T0032019.1 MGP_NODShiLtJ_G0018941.1 mouse_genomes_project 11 109234359 109238481 - MGP_NODShiLtJ_P0032019 Krt10 protein_coding protein_coding MGP_NODShiLtJ_T0031295.1 MGP_NODShiLtJ_G0018759.1 mouse_genomes_project 11 95991440 95997845 + MGP_NODShiLtJ_P0031295 Supt4a protein_coding protein_coding MGP_NODShiLtJ_T0031296.1 MGP_NODShiLtJ_G0018759.1 mouse_genomes_project 11 95991440 96000574 + MGP_NODShiLtJ_P0031296 Supt4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031297.1 MGP_NODShiLtJ_G0018759.1 mouse_genomes_project 11 95991441 96000574 + MGP_NODShiLtJ_P0031297 Supt4a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0012381.1 MGP_NODShiLtJ_G0010489.1 mouse_genomes_project 11 17904417 17906060 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031888.1 MGP_NODShiLtJ_G0018906.1 mouse_genomes_project 11 108115046 108116189 + MGP_NODShiLtJ_P0031888 Tcap protein_coding protein_coding MGP_NODShiLtJ_T0101276.1 MGP_NODShiLtJ_G0039551.1 mouse_genomes_project 11 90746499 90822236 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0009636.1 MGP_NODShiLtJ_G0007769.1 mouse_genomes_project 11 94736727 94736819 - Mir21a miRNA miRNA MGP_NODShiLtJ_T0029150.1 MGP_NODShiLtJ_G0018258.1 mouse_genomes_project 11 65347295 65348188 - Cops3 protein_coding processed_transcript MGP_NODShiLtJ_T0029151.1 MGP_NODShiLtJ_G0018258.1 mouse_genomes_project 11 65347295 65369866 - MGP_NODShiLtJ_P0029151 Cops3 protein_coding protein_coding MGP_NODShiLtJ_T0029152.1 MGP_NODShiLtJ_G0018258.1 mouse_genomes_project 11 65350774 65367174 - MGP_NODShiLtJ_P0029152 Cops3 protein_coding protein_coding MGP_NODShiLtJ_T0029153.1 MGP_NODShiLtJ_G0018258.1 mouse_genomes_project 11 65352692 65369866 - Cops3 protein_coding processed_transcript MGP_NODShiLtJ_T0029154.1 MGP_NODShiLtJ_G0018258.1 mouse_genomes_project 11 65353710 65363473 - Cops3 protein_coding processed_transcript MGP_NODShiLtJ_T0029155.1 MGP_NODShiLtJ_G0018258.1 mouse_genomes_project 11 65355606 65369866 - Cops3 protein_coding processed_transcript MGP_NODShiLtJ_T0029156.1 MGP_NODShiLtJ_G0018258.1 mouse_genomes_project 11 65363270 65369780 - MGP_NODShiLtJ_P0029156 Cops3 protein_coding protein_coding MGP_NODShiLtJ_T0029157.1 MGP_NODShiLtJ_G0018258.1 mouse_genomes_project 11 65366876 65369840 - Cops3 protein_coding processed_transcript MGP_NODShiLtJ_T0097891.1 MGP_NODShiLtJ_G0036303.1 mouse_genomes_project 11 55355373 55355486 + Gm23392 rRNA rRNA MGP_NODShiLtJ_T0032239.1 MGP_NODShiLtJ_G0019033.1 mouse_genomes_project 11 111150140 111153754 - MGP_NODShiLtJ_P0032239 Psmc3ip protein_coding protein_coding MGP_NODShiLtJ_T0032240.1 MGP_NODShiLtJ_G0019033.1 mouse_genomes_project 11 111150449 111153718 - Psmc3ip protein_coding retained_intron MGP_NODShiLtJ_T0032241.1 MGP_NODShiLtJ_G0019033.1 mouse_genomes_project 11 111150474 111152478 - Psmc3ip protein_coding retained_intron MGP_NODShiLtJ_T0032242.1 MGP_NODShiLtJ_G0019033.1 mouse_genomes_project 11 111150804 111153694 - MGP_NODShiLtJ_P0032242 Psmc3ip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027956.1 MGP_NODShiLtJ_G0017926.1 mouse_genomes_project 11 20486774 20495853 - MGP_NODShiLtJ_P0027956 Lgalsl protein_coding protein_coding MGP_NODShiLtJ_T0027957.1 MGP_NODShiLtJ_G0017926.1 mouse_genomes_project 11 20491146 20495552 - Lgalsl protein_coding processed_transcript MGP_NODShiLtJ_T0027958.1 MGP_NODShiLtJ_G0017926.1 mouse_genomes_project 11 20494108 20495853 - Lgalsl protein_coding processed_transcript MGP_NODShiLtJ_T0027959.1 MGP_NODShiLtJ_G0017926.1 mouse_genomes_project 11 20494593 20495819 - Lgalsl protein_coding processed_transcript MGP_NODShiLtJ_T0030810.1 MGP_NODShiLtJ_G0018631.1 mouse_genomes_project 11 85961936 85963571 + MGP_NODShiLtJ_P0030810 Sebox protein_coding protein_coding MGP_NODShiLtJ_T0030811.1 MGP_NODShiLtJ_G0018631.1 mouse_genomes_project 11 85961988 85963564 + MGP_NODShiLtJ_P0030811 Sebox protein_coding protein_coding MGP_NODShiLtJ_T0032667.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113643091 113672586 - MGP_NODShiLtJ_P0032667 Arhgap27 protein_coding protein_coding MGP_NODShiLtJ_T0032668.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113643092 113675373 - Arhgap27 protein_coding retained_intron MGP_NODShiLtJ_T0032669.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113643094 113656314 - MGP_NODShiLtJ_P0032669 Arhgap27 protein_coding protein_coding MGP_NODShiLtJ_T0032670.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113644760 113645705 - Arhgap27 protein_coding retained_intron MGP_NODShiLtJ_T0032671.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113644823 113644990 - Arhgap27 protein_coding processed_transcript MGP_NODShiLtJ_T0032672.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113645059 113645684 - Arhgap27 protein_coding retained_intron MGP_NODShiLtJ_T0032673.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113646862 113651307 - Arhgap27 protein_coding retained_intron MGP_NODShiLtJ_T0032674.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113649368 113650891 - Arhgap27 protein_coding retained_intron MGP_NODShiLtJ_T0032675.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113650816 113668045 - MGP_NODShiLtJ_P0032675 Arhgap27 protein_coding protein_coding MGP_NODShiLtJ_T0032676.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113651719 113668059 - MGP_NODShiLtJ_P0032676 Arhgap27 protein_coding protein_coding MGP_NODShiLtJ_T0032677.1 MGP_NODShiLtJ_G0019115.1 mouse_genomes_project 11 113671424 113675145 - MGP_NODShiLtJ_P0032677 Arhgap27 protein_coding protein_coding MGP_NODShiLtJ_T0032067.1 MGP_NODShiLtJ_G0018987.1 mouse_genomes_project 11 109973061 109979946 - MGP_NODShiLtJ_P0032067 Krt33a protein_coding protein_coding MGP_NODShiLtJ_T0028724.1 MGP_NODShiLtJ_G0018124.1 mouse_genomes_project 11 56312515 56319188 + MGP_NODShiLtJ_P0028724 protein_coding protein_coding MGP_NODShiLtJ_T0028725.1 MGP_NODShiLtJ_G0018124.1 mouse_genomes_project 11 56312517 56319187 + MGP_NODShiLtJ_P0028725 protein_coding protein_coding MGP_NODShiLtJ_T0030285.1 MGP_NODShiLtJ_G0018495.1 mouse_genomes_project 11 79743005 79775330 + MGP_NODShiLtJ_P0030285 Atp2a3 protein_coding protein_coding MGP_NODShiLtJ_T0030286.1 MGP_NODShiLtJ_G0018495.1 mouse_genomes_project 11 79743005 79775330 + MGP_NODShiLtJ_P0030286 Atp2a3 protein_coding protein_coding MGP_NODShiLtJ_T0030287.1 MGP_NODShiLtJ_G0018495.1 mouse_genomes_project 11 79743005 79775330 + MGP_NODShiLtJ_P0030287 Atp2a3 protein_coding protein_coding MGP_NODShiLtJ_T0030288.1 MGP_NODShiLtJ_G0018495.1 mouse_genomes_project 11 79743005 79775331 + MGP_NODShiLtJ_P0030288 Atp2a3 protein_coding protein_coding MGP_NODShiLtJ_T0030289.1 MGP_NODShiLtJ_G0018495.1 mouse_genomes_project 11 79743005 79775331 + MGP_NODShiLtJ_P0030289 Atp2a3 protein_coding protein_coding MGP_NODShiLtJ_T0030290.1 MGP_NODShiLtJ_G0018495.1 mouse_genomes_project 11 79743126 79752533 + Atp2a3 protein_coding retained_intron MGP_NODShiLtJ_T0030291.1 MGP_NODShiLtJ_G0018495.1 mouse_genomes_project 11 79764384 79765833 + Atp2a3 protein_coding processed_transcript MGP_NODShiLtJ_T0032644.1 MGP_NODShiLtJ_G0019109.1 mouse_genomes_project 11 113401804 113405532 + MGP_NODShiLtJ_P0032644 Hexim1 protein_coding protein_coding MGP_NODShiLtJ_T0012526.1 MGP_NODShiLtJ_G0010634.1 mouse_genomes_project 11 72719267 72720246 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033608.1 MGP_NODShiLtJ_G0019313.1 mouse_genomes_project 11 129773323 129780636 + MGP_NODShiLtJ_P0033608 Birc5 protein_coding protein_coding MGP_NODShiLtJ_T0033609.1 MGP_NODShiLtJ_G0019313.1 mouse_genomes_project 11 129773391 129780647 + MGP_NODShiLtJ_P0033609 Birc5 protein_coding protein_coding MGP_NODShiLtJ_T0006270.1 MGP_NODShiLtJ_G0005225.1 mouse_genomes_project 11 111777413 111777975 + Gm11635 lincRNA lincRNA MGP_NODShiLtJ_T0006271.1 MGP_NODShiLtJ_G0005225.1 mouse_genomes_project 11 111777499 111782772 + Gm11635 lincRNA lincRNA MGP_NODShiLtJ_T0017101.1 MGP_NODShiLtJ_G0015061.1 mouse_genomes_project 11 91462508 91507057 + E230016K23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017102.1 MGP_NODShiLtJ_G0015061.1 mouse_genomes_project 11 91462536 91482787 + E230016K23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017103.1 MGP_NODShiLtJ_G0015061.1 mouse_genomes_project 11 91505025 91506267 + E230016K23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0006108.1 MGP_NODShiLtJ_G0005096.1 mouse_genomes_project 11 1224110 1225590 + Gm11958 lincRNA lincRNA MGP_NODShiLtJ_T0017015.1 MGP_NODShiLtJ_G0015015.1 mouse_genomes_project 11 144657 173000 - Gm12592 processed_transcript processed_transcript MGP_NODShiLtJ_T0029859.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76353796 76357324 - MGP_NODShiLtJ_P0029859 2810408A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0029860.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76353802 76357316 - MGP_NODShiLtJ_P0029860 2810408A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0029861.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76353807 76357368 - MGP_NODShiLtJ_P0029861 2810408A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0029862.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76353807 76357387 - MGP_NODShiLtJ_P0029862 2810408A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0029863.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76353807 76357405 - MGP_NODShiLtJ_P0029863 2810408A11Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029864.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76353910 76357417 - 2810408A11Rik protein_coding retained_intron MGP_NODShiLtJ_T0029865.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76353910 76357387 - MGP_NODShiLtJ_P0029865 2810408A11Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029866.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76354649 76356089 - 2810408A11Rik protein_coding retained_intron MGP_NODShiLtJ_T0029867.1 MGP_NODShiLtJ_G0018414.1 mouse_genomes_project 11 76355652 76357369 - MGP_NODShiLtJ_P0029867 2810408A11Rik protein_coding protein_coding MGP_NODShiLtJ_T0031519.1 MGP_NODShiLtJ_G0018813.1 mouse_genomes_project 11 103901788 103918114 + MGP_NODShiLtJ_P0031519 Lrrc59 protein_coding protein_coding MGP_NODShiLtJ_T0031520.1 MGP_NODShiLtJ_G0018813.1 mouse_genomes_project 11 103901835 103907297 + Lrrc59 protein_coding retained_intron MGP_NODShiLtJ_T0101554.1 MGP_NODShiLtJ_G0039724.1 mouse_genomes_project 11 81093201 81098911 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0099904.1 MGP_NODShiLtJ_G0038298.1 mouse_genomes_project 11 9348874 9349002 - Gm26458 snoRNA snoRNA MGP_NODShiLtJ_T0028505.1 MGP_NODShiLtJ_G0018062.1 mouse_genomes_project 11 53077047 53108263 - MGP_NODShiLtJ_P0028505 protein_coding protein_coding MGP_NODShiLtJ_T0003211.1 MGP_NODShiLtJ_G0002966.1 mouse_genomes_project 11 104429761 104435304 + Gm11513 antisense antisense MGP_NODShiLtJ_T0030502.1 MGP_NODShiLtJ_G0018567.1 mouse_genomes_project 11 82796388 82814656 + MGP_NODShiLtJ_P0030502 Inpp5k protein_coding protein_coding MGP_NODShiLtJ_T0030503.1 MGP_NODShiLtJ_G0018567.1 mouse_genomes_project 11 82796429 82814648 + Inpp5k protein_coding retained_intron MGP_NODShiLtJ_T0030504.1 MGP_NODShiLtJ_G0018567.1 mouse_genomes_project 11 82796437 82800671 + Inpp5k protein_coding retained_intron MGP_NODShiLtJ_T0030505.1 MGP_NODShiLtJ_G0018567.1 mouse_genomes_project 11 82796455 82814650 + MGP_NODShiLtJ_P0030505 Inpp5k protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030506.1 MGP_NODShiLtJ_G0018567.1 mouse_genomes_project 11 82804397 82813060 + Inpp5k protein_coding retained_intron MGP_NODShiLtJ_T0030507.1 MGP_NODShiLtJ_G0018567.1 mouse_genomes_project 11 82812569 82813515 + Inpp5k protein_coding processed_transcript MGP_NODShiLtJ_T0030508.1 MGP_NODShiLtJ_G0018567.1 mouse_genomes_project 11 82812629 82813648 + MGP_NODShiLtJ_P0030508 Inpp5k protein_coding protein_coding MGP_NODShiLtJ_T0006153.1 MGP_NODShiLtJ_G0005134.1 mouse_genomes_project 11 35019532 35036960 + Gm12116 lincRNA lincRNA MGP_NODShiLtJ_T0003288.1 MGP_NODShiLtJ_G0003029.1 mouse_genomes_project 11 127098276 127100005 - Ict1os antisense antisense MGP_NODShiLtJ_T0017080.1 MGP_NODShiLtJ_G0015050.1 mouse_genomes_project 11 74176024 74203223 + 9130017K11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017081.1 MGP_NODShiLtJ_G0015050.1 mouse_genomes_project 11 74176896 74178314 + 9130017K11Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0029232.1 MGP_NODShiLtJ_G0018273.1 mouse_genomes_project 11 66328423 66329022 - Flii protein_coding retained_intron MGP_NODShiLtJ_T0029233.1 MGP_NODShiLtJ_G0018273.1 mouse_genomes_project 11 66328443 66341563 - MGP_NODShiLtJ_P0029233 Flii protein_coding protein_coding MGP_NODShiLtJ_T0029234.1 MGP_NODShiLtJ_G0018273.1 mouse_genomes_project 11 66333527 66334442 - Flii protein_coding retained_intron MGP_NODShiLtJ_T0029235.1 MGP_NODShiLtJ_G0018273.1 mouse_genomes_project 11 66338664 66341523 - Flii protein_coding retained_intron MGP_NODShiLtJ_T0030862.1 MGP_NODShiLtJ_G0018646.1 mouse_genomes_project 11 87002970 87006071 - MGP_NODShiLtJ_P0030862 Omg protein_coding protein_coding MGP_NODShiLtJ_T0028508.1 MGP_NODShiLtJ_G0018064.1 mouse_genomes_project 11 53188520 53189357 - MGP_NODShiLtJ_P0028508 Psme2b protein_coding protein_coding MGP_NODShiLtJ_T0099905.1 MGP_NODShiLtJ_G0038299.1 mouse_genomes_project 11 10758867 10759008 + Gm22156 snoRNA snoRNA MGP_NODShiLtJ_T0012642.1 MGP_NODShiLtJ_G0010750.1 mouse_genomes_project 11 117912134 117912671 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029811.1 MGP_NODShiLtJ_G0018398.1 mouse_genomes_project 11 76093217 76104902 - MGP_NODShiLtJ_P0029811 Tnfsf12 protein_coding protein_coding MGP_NODShiLtJ_T0029812.1 MGP_NODShiLtJ_G0018398.1 mouse_genomes_project 11 76094307 76104574 - MGP_NODShiLtJ_P0029812 Tnfsf12 protein_coding protein_coding MGP_NODShiLtJ_T0011683.1 MGP_NODShiLtJ_G0009814.1 mouse_genomes_project 11 80193042 80197170 - MGP_NODShiLtJ_P0011683 Olfr377-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0012487.1 MGP_NODShiLtJ_G0010595.1 mouse_genomes_project 11 58907299 58907742 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012562.1 MGP_NODShiLtJ_G0010670.1 mouse_genomes_project 11 86171174 86172198 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032033.1 MGP_NODShiLtJ_G0018953.1 mouse_genomes_project 11 109460607 109461486 - MGP_NODShiLtJ_P0032033 Krtap1-3 protein_coding protein_coding MGP_NODShiLtJ_T0028520.1 MGP_NODShiLtJ_G0018070.1 mouse_genomes_project 11 53451328 53452309 - MGP_NODShiLtJ_P0028520 Olfr1396 protein_coding protein_coding MGP_NODShiLtJ_T0098252.1 MGP_NODShiLtJ_G0036663.1 mouse_genomes_project 11 196193 197532 - Gm11948 sense_intronic sense_intronic MGP_NODShiLtJ_T0003076.1 MGP_NODShiLtJ_G0002854.1 mouse_genomes_project 11 16066085 16083038 - Egfros antisense antisense MGP_NODShiLtJ_T0012473.1 MGP_NODShiLtJ_G0010581.1 mouse_genomes_project 11 54872183 54872445 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006310.1 MGP_NODShiLtJ_G0005255.1 mouse_genomes_project 11 131097777 131102052 + Gm26508 lincRNA lincRNA MGP_NODShiLtJ_T0011185.1 MGP_NODShiLtJ_G0009318.1 mouse_genomes_project 11 16855614 16855938 + Gm23959 misc_RNA misc_RNA MGP_NODShiLtJ_T0028993.1 MGP_NODShiLtJ_G0018195.1 mouse_genomes_project 11 63420267 63435726 + MGP_NODShiLtJ_P0028993 Cnot8 protein_coding protein_coding MGP_NODShiLtJ_T0028994.1 MGP_NODShiLtJ_G0018195.1 mouse_genomes_project 11 63420343 63435726 + MGP_NODShiLtJ_P0028994 Cnot8 protein_coding protein_coding MGP_NODShiLtJ_T0028995.1 MGP_NODShiLtJ_G0018195.1 mouse_genomes_project 11 63420480 63428517 + MGP_NODShiLtJ_P0028995 Cnot8 protein_coding protein_coding MGP_NODShiLtJ_T0028996.1 MGP_NODShiLtJ_G0018195.1 mouse_genomes_project 11 63431170 63434390 + Cnot8 protein_coding processed_transcript MGP_NODShiLtJ_T0009652.1 MGP_NODShiLtJ_G0007785.1 mouse_genomes_project 11 107725127 107725207 + Gm27597 miRNA miRNA MGP_NODShiLtJ_T0099898.1 MGP_NODShiLtJ_G0038292.1 mouse_genomes_project 11 2652124 2652254 - Gm22471 snoRNA snoRNA MGP_NODShiLtJ_T0012632.1 MGP_NODShiLtJ_G0010740.1 mouse_genomes_project 11 114898658 114899070 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029899.1 MGP_NODShiLtJ_G0018418.1 mouse_genomes_project 11 76394265 76399895 + MGP_NODShiLtJ_P0029899 Ybx2 protein_coding protein_coding MGP_NODShiLtJ_T0029900.1 MGP_NODShiLtJ_G0018418.1 mouse_genomes_project 11 76394617 76399888 + MGP_NODShiLtJ_P0029900 Ybx2 protein_coding protein_coding MGP_NODShiLtJ_T0029901.1 MGP_NODShiLtJ_G0018418.1 mouse_genomes_project 11 76398137 76398953 + Ybx2 protein_coding retained_intron MGP_NODShiLtJ_T0029902.1 MGP_NODShiLtJ_G0018418.1 mouse_genomes_project 11 76398834 76399886 + Ybx2 protein_coding retained_intron MGP_NODShiLtJ_T0009608.1 MGP_NODShiLtJ_G0007741.1 mouse_genomes_project 11 76442723 76442846 + Gm44349 miRNA miRNA MGP_NODShiLtJ_T0028850.1 MGP_NODShiLtJ_G0018158.1 mouse_genomes_project 11 58688920 58702551 - Gm12216 protein_coding processed_transcript MGP_NODShiLtJ_T0028851.1 MGP_NODShiLtJ_G0018158.1 mouse_genomes_project 11 58689793 58772058 - Gm12216 protein_coding processed_transcript MGP_NODShiLtJ_T0028852.1 MGP_NODShiLtJ_G0018158.1 mouse_genomes_project 11 58692295 58772170 - MGP_NODShiLtJ_P0028852 Gm12216 protein_coding protein_coding MGP_NODShiLtJ_T0028853.1 MGP_NODShiLtJ_G0018158.1 mouse_genomes_project 11 58710376 58772143 - Gm12216 protein_coding processed_transcript MGP_NODShiLtJ_T0028854.1 MGP_NODShiLtJ_G0018158.1 mouse_genomes_project 11 58715935 58772170 - MGP_NODShiLtJ_P0028854 Gm12216 protein_coding protein_coding MGP_NODShiLtJ_T0028855.1 MGP_NODShiLtJ_G0018158.1 mouse_genomes_project 11 58719637 58772170 - MGP_NODShiLtJ_P0028855 Gm12216 protein_coding protein_coding MGP_NODShiLtJ_T0012607.1 MGP_NODShiLtJ_G0010715.1 mouse_genomes_project 11 106629501 106629978 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009559.1 MGP_NODShiLtJ_G0007692.1 mouse_genomes_project 11 1063974 1064057 + Mir3060 miRNA miRNA MGP_NODShiLtJ_T0017088.1 MGP_NODShiLtJ_G0015054.1 mouse_genomes_project 11 82302453 82307550 + 1700016P03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0006123.1 MGP_NODShiLtJ_G0005110.1 mouse_genomes_project 11 22554061 22565753 - Gm26829 lincRNA lincRNA MGP_NODShiLtJ_T0028174.1 MGP_NODShiLtJ_G0017972.1 mouse_genomes_project 11 32323798 32452538 + MGP_NODShiLtJ_P0028174 protein_coding protein_coding MGP_NODShiLtJ_T0028175.1 MGP_NODShiLtJ_G0017972.1 mouse_genomes_project 11 32324056 32453336 + MGP_NODShiLtJ_P0028175 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028176.1 MGP_NODShiLtJ_G0017972.1 mouse_genomes_project 11 32324394 32360308 + MGP_NODShiLtJ_P0028176 protein_coding protein_coding MGP_NODShiLtJ_T0028177.1 MGP_NODShiLtJ_G0017972.1 mouse_genomes_project 11 32367507 32370070 + protein_coding processed_transcript MGP_NODShiLtJ_T0028178.1 MGP_NODShiLtJ_G0017972.1 mouse_genomes_project 11 32388473 32393401 + protein_coding processed_transcript MGP_NODShiLtJ_T0028179.1 MGP_NODShiLtJ_G0017972.1 mouse_genomes_project 11 32415464 32419851 + MGP_NODShiLtJ_P0028179 protein_coding protein_coding MGP_NODShiLtJ_T0028180.1 MGP_NODShiLtJ_G0017972.1 mouse_genomes_project 11 32433019 32446306 + protein_coding processed_transcript MGP_NODShiLtJ_T0031600.1 MGP_NODShiLtJ_G0018835.1 mouse_genomes_project 11 104996531 105015397 - MGP_NODShiLtJ_P0031600 Ngfr protein_coding protein_coding MGP_NODShiLtJ_T0012431.1 MGP_NODShiLtJ_G0010539.1 mouse_genomes_project 11 32379718 32380080 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029616.1 MGP_NODShiLtJ_G0018357.1 mouse_genomes_project 11 75266330 75272067 - MGP_NODShiLtJ_P0029616 Odf4 protein_coding protein_coding MGP_NODShiLtJ_T0029617.1 MGP_NODShiLtJ_G0018357.1 mouse_genomes_project 11 75266331 75272099 - MGP_NODShiLtJ_P0029617 Odf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029618.1 MGP_NODShiLtJ_G0018357.1 mouse_genomes_project 11 75266458 75271834 - MGP_NODShiLtJ_P0029618 Odf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029619.1 MGP_NODShiLtJ_G0018357.1 mouse_genomes_project 11 75267314 75272092 - MGP_NODShiLtJ_P0029619 Odf4 protein_coding protein_coding MGP_NODShiLtJ_T0033393.1 MGP_NODShiLtJ_G0019273.1 mouse_genomes_project 11 127884526 127891577 - MGP_NODShiLtJ_P0033393 Mrpl38 protein_coding protein_coding MGP_NODShiLtJ_T0033394.1 MGP_NODShiLtJ_G0019273.1 mouse_genomes_project 11 127884530 127891484 - Mrpl38 protein_coding retained_intron MGP_NODShiLtJ_T0033395.1 MGP_NODShiLtJ_G0019273.1 mouse_genomes_project 11 127885494 127891498 - Mrpl38 protein_coding retained_intron MGP_NODShiLtJ_T0033396.1 MGP_NODShiLtJ_G0019273.1 mouse_genomes_project 11 127886770 127887165 - Mrpl38 protein_coding retained_intron MGP_NODShiLtJ_T0033397.1 MGP_NODShiLtJ_G0019273.1 mouse_genomes_project 11 127886964 127887336 - Mrpl38 protein_coding retained_intron MGP_NODShiLtJ_T0033398.1 MGP_NODShiLtJ_G0019273.1 mouse_genomes_project 11 127890490 127891574 - Mrpl38 protein_coding retained_intron MGP_NODShiLtJ_T0003070.1 MGP_NODShiLtJ_G0002850.1 mouse_genomes_project 11 9514574 9540416 + Gm11998 antisense antisense MGP_NODShiLtJ_T0031876.1 MGP_NODShiLtJ_G0018904.1 mouse_genomes_project 11 108078566 108087304 + MGP_NODShiLtJ_P0031876 Ppp1r1b protein_coding protein_coding MGP_NODShiLtJ_T0031877.1 MGP_NODShiLtJ_G0018904.1 mouse_genomes_project 11 108080327 108087289 + Ppp1r1b protein_coding retained_intron MGP_NODShiLtJ_T0031878.1 MGP_NODShiLtJ_G0018904.1 mouse_genomes_project 11 108080687 108086892 + Ppp1r1b protein_coding retained_intron MGP_NODShiLtJ_T0031879.1 MGP_NODShiLtJ_G0018904.1 mouse_genomes_project 11 108080961 108086787 + Ppp1r1b protein_coding processed_transcript MGP_NODShiLtJ_T0031880.1 MGP_NODShiLtJ_G0018904.1 mouse_genomes_project 11 108084068 108086604 + Ppp1r1b protein_coding processed_transcript MGP_NODShiLtJ_T0032689.1 MGP_NODShiLtJ_G0019122.1 mouse_genomes_project 11 114101254 114145045 + MGP_NODShiLtJ_P0032689 Wnt3 protein_coding protein_coding MGP_NODShiLtJ_T0032068.1 MGP_NODShiLtJ_G0018988.1 mouse_genomes_project 11 109992346 109999768 - MGP_NODShiLtJ_P0032068 Krt33b protein_coding protein_coding MGP_NODShiLtJ_T0012364.1 MGP_NODShiLtJ_G0010472.1 mouse_genomes_project 11 10163558 10166478 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006233.1 MGP_NODShiLtJ_G0005200.1 mouse_genomes_project 11 92485862 92496032 + Lhx1os lincRNA lincRNA MGP_NODShiLtJ_T0006234.1 MGP_NODShiLtJ_G0005200.1 mouse_genomes_project 11 92485871 92496032 + Lhx1os lincRNA lincRNA MGP_NODShiLtJ_T0006235.1 MGP_NODShiLtJ_G0005200.1 mouse_genomes_project 11 92485886 92496031 + Lhx1os lincRNA lincRNA MGP_NODShiLtJ_T0031731.1 MGP_NODShiLtJ_G0018871.1 mouse_genomes_project 11 106627092 106633879 - MGP_NODShiLtJ_P0031731 Lrrc46 protein_coding protein_coding MGP_NODShiLtJ_T0032076.1 MGP_NODShiLtJ_G0018994.1 mouse_genomes_project 11 110092563 110096803 - MGP_NODShiLtJ_P0032076 Krt13 protein_coding protein_coding MGP_NODShiLtJ_T0032077.1 MGP_NODShiLtJ_G0018994.1 mouse_genomes_project 11 110093137 110094071 - Krt13 protein_coding retained_intron MGP_NODShiLtJ_T0032078.1 MGP_NODShiLtJ_G0018994.1 mouse_genomes_project 11 110094381 110095814 - Krt13 protein_coding processed_transcript MGP_NODShiLtJ_T0031801.1 MGP_NODShiLtJ_G0018887.1 mouse_genomes_project 11 107355279 107368822 + MGP_NODShiLtJ_P0031801 Psmb3 protein_coding protein_coding MGP_NODShiLtJ_T0031802.1 MGP_NODShiLtJ_G0018887.1 mouse_genomes_project 11 107355314 107362145 + Psmb3 protein_coding retained_intron MGP_NODShiLtJ_T0031803.1 MGP_NODShiLtJ_G0018887.1 mouse_genomes_project 11 107367409 107368822 + Psmb3 protein_coding retained_intron MGP_NODShiLtJ_T0028104.1 MGP_NODShiLtJ_G0017958.1 mouse_genomes_project 11 30141654 30227359 + MGP_NODShiLtJ_P0028104 Efemp1 protein_coding protein_coding MGP_NODShiLtJ_T0028105.1 MGP_NODShiLtJ_G0017958.1 mouse_genomes_project 11 30141694 30222132 + Efemp1 protein_coding processed_transcript MGP_NODShiLtJ_T0028106.1 MGP_NODShiLtJ_G0017958.1 mouse_genomes_project 11 30216296 30227359 + MGP_NODShiLtJ_P0028106 Efemp1 protein_coding protein_coding MGP_NODShiLtJ_T0027717.1 MGP_NODShiLtJ_G0017870.1 mouse_genomes_project 11 3109989 3122063 + MGP_NODShiLtJ_P0027717 Ykt6 protein_coding protein_coding MGP_NODShiLtJ_T0027718.1 MGP_NODShiLtJ_G0017870.1 mouse_genomes_project 11 3113600 3117492 + Ykt6 protein_coding processed_transcript MGP_NODShiLtJ_T0006220.1 MGP_NODShiLtJ_G0005193.1 mouse_genomes_project 11 87223466 87224257 + Gm11205 lincRNA lincRNA MGP_NODShiLtJ_T0098708.1 MGP_NODShiLtJ_G0037102.1 mouse_genomes_project 11 93565608 93565755 + Gm23765 snRNA snRNA MGP_NODShiLtJ_T0027559.1 MGP_NODShiLtJ_G0017834.1 mouse_genomes_project 11 1085957 1109195 + MGP_NODShiLtJ_P0027559 Sf3a1 protein_coding protein_coding MGP_NODShiLtJ_T0027560.1 MGP_NODShiLtJ_G0017834.1 mouse_genomes_project 11 1085962 1099764 + Sf3a1 protein_coding processed_transcript MGP_NODShiLtJ_T0027561.1 MGP_NODShiLtJ_G0017834.1 mouse_genomes_project 11 1085962 1098572 + Sf3a1 protein_coding retained_intron MGP_NODShiLtJ_T0027562.1 MGP_NODShiLtJ_G0017834.1 mouse_genomes_project 11 1104201 1106073 + Sf3a1 protein_coding retained_intron MGP_NODShiLtJ_T0028360.1 MGP_NODShiLtJ_G0018022.1 mouse_genomes_project 11 45792867 45809154 - MGP_NODShiLtJ_P0028360 Gabra6 protein_coding protein_coding MGP_NODShiLtJ_T0028361.1 MGP_NODShiLtJ_G0018022.1 mouse_genomes_project 11 45792868 45809156 - MGP_NODShiLtJ_P0028361 Gabra6 protein_coding protein_coding MGP_NODShiLtJ_T0028362.1 MGP_NODShiLtJ_G0018022.1 mouse_genomes_project 11 45794284 45809213 - MGP_NODShiLtJ_P0028362 Gabra6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028363.1 MGP_NODShiLtJ_G0018022.1 mouse_genomes_project 11 45794496 45809177 - MGP_NODShiLtJ_P0028363 Gabra6 protein_coding protein_coding MGP_NODShiLtJ_T0031844.1 MGP_NODShiLtJ_G0018897.1 mouse_genomes_project 11 107696935 107718349 - MGP_NODShiLtJ_P0031844 Cacnb1 protein_coding protein_coding MGP_NODShiLtJ_T0031845.1 MGP_NODShiLtJ_G0018897.1 mouse_genomes_project 11 107698328 107718342 - MGP_NODShiLtJ_P0031845 Cacnb1 protein_coding protein_coding MGP_NODShiLtJ_T0031846.1 MGP_NODShiLtJ_G0018897.1 mouse_genomes_project 11 107700458 107714080 - MGP_NODShiLtJ_P0031846 Cacnb1 protein_coding protein_coding MGP_NODShiLtJ_T0031847.1 MGP_NODShiLtJ_G0018897.1 mouse_genomes_project 11 107700636 107718349 - MGP_NODShiLtJ_P0031847 Cacnb1 protein_coding protein_coding MGP_NODShiLtJ_T0031848.1 MGP_NODShiLtJ_G0018897.1 mouse_genomes_project 11 107700636 107718349 - MGP_NODShiLtJ_P0031848 Cacnb1 protein_coding protein_coding MGP_NODShiLtJ_T0031849.1 MGP_NODShiLtJ_G0018897.1 mouse_genomes_project 11 107705336 107718749 - Cacnb1 protein_coding processed_transcript MGP_NODShiLtJ_T0031850.1 MGP_NODShiLtJ_G0018897.1 mouse_genomes_project 11 107705371 107708263 - Cacnb1 protein_coding processed_transcript MGP_NODShiLtJ_T0006228.1 MGP_NODShiLtJ_G0005197.1 mouse_genomes_project 11 90369601 90372558 + Gm11426 lincRNA lincRNA MGP_NODShiLtJ_T0012467.1 MGP_NODShiLtJ_G0010575.1 mouse_genomes_project 11 52930877 52932403 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003272.1 MGP_NODShiLtJ_G0003017.1 mouse_genomes_project 11 118125904 118127893 + Gm11712 antisense antisense MGP_NODShiLtJ_T0027787.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3833859 3848898 - MGP_NODShiLtJ_P0027787 Tbrg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027788.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3833860 3848922 - MGP_NODShiLtJ_P0027788 Tbrg4 protein_coding protein_coding MGP_NODShiLtJ_T0027789.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3837714 3848898 - MGP_NODShiLtJ_P0027789 Tbrg4 protein_coding protein_coding MGP_NODShiLtJ_T0027790.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3837716 3848898 - MGP_NODShiLtJ_P0027790 Tbrg4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027791.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3838545 3839321 - Tbrg4 protein_coding retained_intron MGP_NODShiLtJ_T0027792.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3840848 3842208 - Tbrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0027793.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3840878 3841738 - Tbrg4 protein_coding retained_intron MGP_NODShiLtJ_T0027794.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3841294 3842544 - Tbrg4 protein_coding retained_intron MGP_NODShiLtJ_T0027795.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3841472 3842358 - Tbrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0027796.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3842289 3848922 - MGP_NODShiLtJ_P0027796 Tbrg4 protein_coding protein_coding MGP_NODShiLtJ_T0027797.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3844492 3848877 - Tbrg4 protein_coding processed_transcript MGP_NODShiLtJ_T0027798.1 MGP_NODShiLtJ_G0017885.1 mouse_genomes_project 11 3845175 3846756 - MGP_NODShiLtJ_P0027798 Tbrg4 protein_coding protein_coding MGP_NODShiLtJ_T0031065.1 MGP_NODShiLtJ_G0018709.1 mouse_genomes_project 11 91638995 91645659 + MGP_NODShiLtJ_P0031065 Wfdc21 protein_coding protein_coding MGP_NODShiLtJ_T0012481.1 MGP_NODShiLtJ_G0010589.1 mouse_genomes_project 11 58192166 58192567 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006252.1 MGP_NODShiLtJ_G0005213.1 mouse_genomes_project 11 99401426 99512412 + 4930405D11Rik lincRNA lincRNA MGP_NODShiLtJ_T0006253.1 MGP_NODShiLtJ_G0005213.1 mouse_genomes_project 11 99497274 99512356 + 4930405D11Rik lincRNA lincRNA MGP_NODShiLtJ_T0006254.1 MGP_NODShiLtJ_G0005213.1 mouse_genomes_project 11 99497299 99512262 + 4930405D11Rik lincRNA lincRNA MGP_NODShiLtJ_T0011688.1 MGP_NODShiLtJ_G0009818.1 mouse_genomes_project 11 80873753 80882273 + MGP_NODShiLtJ_P0011688 Olfr22-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0032535.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112679707 112686385 + MGP_NODShiLtJ_P0032535 Grn protein_coding protein_coding MGP_NODShiLtJ_T0032536.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112679910 112684022 + MGP_NODShiLtJ_P0032536 Grn protein_coding protein_coding MGP_NODShiLtJ_T0032537.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112682360 112683833 + Grn protein_coding retained_intron MGP_NODShiLtJ_T0032538.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112683507 112684169 + Grn protein_coding retained_intron MGP_NODShiLtJ_T0032539.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112683674 112684838 + Grn protein_coding retained_intron MGP_NODShiLtJ_T0032540.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112683677 112684467 + Grn protein_coding retained_intron MGP_NODShiLtJ_T0032541.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112684293 112685520 + Grn protein_coding retained_intron MGP_NODShiLtJ_T0032542.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112684860 112686149 + MGP_NODShiLtJ_P0032542 Grn protein_coding protein_coding MGP_NODShiLtJ_T0032543.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112684881 112685640 + Grn protein_coding retained_intron MGP_NODShiLtJ_T0032544.1 MGP_NODShiLtJ_G0019088.1 mouse_genomes_project 11 112684991 112686607 + MGP_NODShiLtJ_P0032544 Grn protein_coding protein_coding MGP_NODShiLtJ_T0029963.1 MGP_NODShiLtJ_G0018428.1 mouse_genomes_project 11 76525715 76529537 + MGP_NODShiLtJ_P0029963 Asgr1 protein_coding protein_coding MGP_NODShiLtJ_T0029964.1 MGP_NODShiLtJ_G0018428.1 mouse_genomes_project 11 76525985 76529537 + MGP_NODShiLtJ_P0029964 Asgr1 protein_coding protein_coding MGP_NODShiLtJ_T0029965.1 MGP_NODShiLtJ_G0018428.1 mouse_genomes_project 11 76525985 76529534 + MGP_NODShiLtJ_P0029965 Asgr1 protein_coding protein_coding MGP_NODShiLtJ_T0029966.1 MGP_NODShiLtJ_G0018428.1 mouse_genomes_project 11 76526328 76529537 + MGP_NODShiLtJ_P0029966 Asgr1 protein_coding protein_coding MGP_NODShiLtJ_T0029967.1 MGP_NODShiLtJ_G0018428.1 mouse_genomes_project 11 76527517 76529013 + MGP_NODShiLtJ_P0029967 Asgr1 protein_coding protein_coding MGP_NODShiLtJ_T0033861.1 MGP_NODShiLtJ_G0019364.1 mouse_genomes_project 11 132659100 132667386 + MGP_NODShiLtJ_P0033861 Gcgr protein_coding protein_coding MGP_NODShiLtJ_T0033862.1 MGP_NODShiLtJ_G0019364.1 mouse_genomes_project 11 132659145 132667388 + Gcgr protein_coding processed_transcript MGP_NODShiLtJ_T0033863.1 MGP_NODShiLtJ_G0019364.1 mouse_genomes_project 11 132659175 132667385 + Gcgr protein_coding processed_transcript MGP_NODShiLtJ_T0033864.1 MGP_NODShiLtJ_G0019364.1 mouse_genomes_project 11 132663081 132665111 + Gcgr protein_coding processed_transcript MGP_NODShiLtJ_T0017111.1 MGP_NODShiLtJ_G0015065.1 mouse_genomes_project 11 103952029 103963933 + Gm11542 processed_transcript processed_transcript MGP_NODShiLtJ_T0030007.1 MGP_NODShiLtJ_G0018437.1 mouse_genomes_project 11 76735282 76736939 - MGP_NODShiLtJ_P0030007 Rnasek protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030008.1 MGP_NODShiLtJ_G0018437.1 mouse_genomes_project 11 76735282 76737001 - MGP_NODShiLtJ_P0030008 Rnasek protein_coding protein_coding MGP_NODShiLtJ_T0030009.1 MGP_NODShiLtJ_G0018437.1 mouse_genomes_project 11 76735285 76736217 - MGP_NODShiLtJ_P0030009 Rnasek protein_coding protein_coding MGP_NODShiLtJ_T0009561.1 MGP_NODShiLtJ_G0007694.1 mouse_genomes_project 11 2052319 2052423 + miRNA miRNA MGP_NODShiLtJ_T0033240.1 MGP_NODShiLtJ_G0019249.1 mouse_genomes_project 11 127228822 127240848 - MGP_NODShiLtJ_P0033240 Sumo2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0033241.1 MGP_NODShiLtJ_G0019249.1 mouse_genomes_project 11 127234868 127240906 - Sumo2 protein_coding retained_intron MGP_NODShiLtJ_T0033242.1 MGP_NODShiLtJ_G0019249.1 mouse_genomes_project 11 127239107 127240919 - Sumo2 protein_coding retained_intron MGP_NODShiLtJ_T0032773.1 MGP_NODShiLtJ_G0019139.1 mouse_genomes_project 11 116113104 116344609 + MGP_NODShiLtJ_P0032773 Tanc2 protein_coding protein_coding MGP_NODShiLtJ_T0032774.1 MGP_NODShiLtJ_G0019139.1 mouse_genomes_project 11 116113109 116519524 + MGP_NODShiLtJ_P0032774 Tanc2 protein_coding protein_coding MGP_NODShiLtJ_T0032775.1 MGP_NODShiLtJ_G0019139.1 mouse_genomes_project 11 116165159 116257680 + Tanc2 protein_coding processed_transcript MGP_NODShiLtJ_T0032776.1 MGP_NODShiLtJ_G0019139.1 mouse_genomes_project 11 116255666 116256956 + MGP_NODShiLtJ_P0032776 Tanc2 protein_coding protein_coding MGP_NODShiLtJ_T0032777.1 MGP_NODShiLtJ_G0019139.1 mouse_genomes_project 11 116343831 116513940 + MGP_NODShiLtJ_P0032777 Tanc2 protein_coding protein_coding MGP_NODShiLtJ_T0032778.1 MGP_NODShiLtJ_G0019139.1 mouse_genomes_project 11 116486148 116514339 + MGP_NODShiLtJ_P0032778 Tanc2 protein_coding protein_coding MGP_NODShiLtJ_T0032779.1 MGP_NODShiLtJ_G0019139.1 mouse_genomes_project 11 116491600 116505644 + Tanc2 protein_coding processed_transcript MGP_NODShiLtJ_T0031999.1 MGP_NODShiLtJ_G0018932.1 mouse_genomes_project 11 108877437 108902163 - MGP_NODShiLtJ_P0031999 Tns4 protein_coding protein_coding MGP_NODShiLtJ_T0032000.1 MGP_NODShiLtJ_G0018932.1 mouse_genomes_project 11 108879913 108885652 - Tns4 protein_coding processed_transcript MGP_NODShiLtJ_T0032001.1 MGP_NODShiLtJ_G0018932.1 mouse_genomes_project 11 108882466 108887129 - Tns4 protein_coding retained_intron MGP_NODShiLtJ_T0032002.1 MGP_NODShiLtJ_G0018932.1 mouse_genomes_project 11 108898321 108902142 - Tns4 protein_coding retained_intron MGP_NODShiLtJ_T0032013.1 MGP_NODShiLtJ_G0018936.1 mouse_genomes_project 11 109129288 109134524 - MGP_NODShiLtJ_P0032013 Krt24 protein_coding protein_coding MGP_NODShiLtJ_T0031655.1 MGP_NODShiLtJ_G0018854.1 mouse_genomes_project 11 105844389 105853310 + MGP_NODShiLtJ_P0031655 Hoxb6 protein_coding protein_coding MGP_NODShiLtJ_T0031656.1 MGP_NODShiLtJ_G0018854.1 mouse_genomes_project 11 105850904 105853309 + MGP_NODShiLtJ_P0031656 Hoxb6 protein_coding protein_coding MGP_NODShiLtJ_T0033156.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126852140 126856444 - MGP_NODShiLtJ_P0033156 Nat9 protein_coding protein_coding MGP_NODShiLtJ_T0033157.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126852140 126856933 - MGP_NODShiLtJ_P0033157 Nat9 protein_coding protein_coding MGP_NODShiLtJ_T0033158.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126852140 126856421 - MGP_NODShiLtJ_P0033158 Nat9 protein_coding protein_coding MGP_NODShiLtJ_T0033159.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126852140 126856479 - MGP_NODShiLtJ_P0033159 Nat9 protein_coding protein_coding MGP_NODShiLtJ_T0033160.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126853807 126856351 - Nat9 protein_coding processed_transcript MGP_NODShiLtJ_T0033161.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126853911 126856170 - Nat9 protein_coding processed_transcript MGP_NODShiLtJ_T0033162.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126854101 126856931 - Nat9 protein_coding processed_transcript MGP_NODShiLtJ_T0033163.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126854102 126856948 - Nat9 protein_coding processed_transcript MGP_NODShiLtJ_T0033164.1 MGP_NODShiLtJ_G0019231.1 mouse_genomes_project 11 126854285 126856365 - Nat9 protein_coding processed_transcript MGP_NODShiLtJ_T0029416.1 MGP_NODShiLtJ_G0018306.1 mouse_genomes_project 11 68325590 68339788 - MGP_NODShiLtJ_P0029416 Cenpv protein_coding protein_coding MGP_NODShiLtJ_T0029417.1 MGP_NODShiLtJ_G0018306.1 mouse_genomes_project 11 68325593 68328541 - Cenpv protein_coding retained_intron MGP_NODShiLtJ_T0029418.1 MGP_NODShiLtJ_G0018306.1 mouse_genomes_project 11 68325787 68339012 - Cenpv protein_coding processed_transcript MGP_NODShiLtJ_T0029419.1 MGP_NODShiLtJ_G0018306.1 mouse_genomes_project 11 68328137 68339156 - Cenpv protein_coding processed_transcript MGP_NODShiLtJ_T0029420.1 MGP_NODShiLtJ_G0018306.1 mouse_genomes_project 11 68334455 68339530 - MGP_NODShiLtJ_P0029420 Cenpv protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029421.1 MGP_NODShiLtJ_G0018306.1 mouse_genomes_project 11 68334686 68339530 - Cenpv protein_coding processed_transcript MGP_NODShiLtJ_T0028066.1 MGP_NODShiLtJ_G0017950.1 mouse_genomes_project 11 24029287 24083364 - MGP_NODShiLtJ_P0028066 Papolg protein_coding protein_coding MGP_NODShiLtJ_T0028067.1 MGP_NODShiLtJ_G0017950.1 mouse_genomes_project 11 24031885 24035112 - MGP_NODShiLtJ_P0028067 Papolg protein_coding protein_coding MGP_NODShiLtJ_T0028068.1 MGP_NODShiLtJ_G0017950.1 mouse_genomes_project 11 24033052 24080015 - Papolg protein_coding processed_transcript MGP_NODShiLtJ_T0028069.1 MGP_NODShiLtJ_G0017950.1 mouse_genomes_project 11 24036679 24083347 - MGP_NODShiLtJ_P0028069 Papolg protein_coding protein_coding MGP_NODShiLtJ_T0012521.1 MGP_NODShiLtJ_G0010629.1 mouse_genomes_project 11 68560847 68562064 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012592.1 MGP_NODShiLtJ_G0010700.1 mouse_genomes_project 11 99099915 99100578 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012486.1 MGP_NODShiLtJ_G0010594.1 mouse_genomes_project 11 58823378 58823777 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030544.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83316452 83463825 - Glod4 protein_coding retained_intron MGP_NODShiLtJ_T0030556.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83429038 83463813 - MGP_NODShiLtJ_P0030556 Glod4 protein_coding protein_coding MGP_NODShiLtJ_T0030560.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83439987 83463875 - MGP_NODShiLtJ_P0030560 Glod4 protein_coding protein_coding MGP_NODShiLtJ_T0030561.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83440084 83463801 - MGP_NODShiLtJ_P0030561 Glod4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030562.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83440271 83463609 - MGP_NODShiLtJ_P0030562 Glod4 protein_coding protein_coding MGP_NODShiLtJ_T0030563.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83453269 83463760 - MGP_NODShiLtJ_P0030563 Glod4 protein_coding protein_coding MGP_NODShiLtJ_T0030564.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83454282 83459725 - Glod4 protein_coding retained_intron MGP_NODShiLtJ_T0030565.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83454554 83463819 - MGP_NODShiLtJ_P0030565 Glod4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030566.1 MGP_NODShiLtJ_G0018576.1 mouse_genomes_project 11 83457729 83463788 - MGP_NODShiLtJ_P0030566 Glod4 protein_coding protein_coding MGP_NODShiLtJ_T0017105.1 MGP_NODShiLtJ_G0015063.1 mouse_genomes_project 11 93888190 93929747 - 2610027K06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017106.1 MGP_NODShiLtJ_G0015063.1 mouse_genomes_project 11 93892317 93929761 - 2610027K06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017107.1 MGP_NODShiLtJ_G0015063.1 mouse_genomes_project 11 93892403 93900734 - 2610027K06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0031650.1 MGP_NODShiLtJ_G0018852.1 mouse_genomes_project 11 105833671 105837273 + MGP_NODShiLtJ_P0031650 Hoxb8 protein_coding protein_coding MGP_NODShiLtJ_T0031651.1 MGP_NODShiLtJ_G0018852.1 mouse_genomes_project 11 105834322 105836273 + MGP_NODShiLtJ_P0031651 Hoxb8 protein_coding protein_coding MGP_NODShiLtJ_T0031652.1 MGP_NODShiLtJ_G0018852.1 mouse_genomes_project 11 105834491 105836651 + MGP_NODShiLtJ_P0031652 Hoxb8 protein_coding protein_coding MGP_NODShiLtJ_T0033103.1 MGP_NODShiLtJ_G0019214.1 mouse_genomes_project 11 126316967 126338872 + Kif19a protein_coding processed_transcript MGP_NODShiLtJ_T0033104.1 MGP_NODShiLtJ_G0019214.1 mouse_genomes_project 11 126316967 126338872 + Kif19a protein_coding processed_transcript MGP_NODShiLtJ_T0033105.1 MGP_NODShiLtJ_G0019214.1 mouse_genomes_project 11 126316967 126340828 + MGP_NODShiLtJ_P0033105 Kif19a protein_coding protein_coding MGP_NODShiLtJ_T0033106.1 MGP_NODShiLtJ_G0019214.1 mouse_genomes_project 11 126316968 126343269 + MGP_NODShiLtJ_P0033106 Kif19a protein_coding protein_coding MGP_NODShiLtJ_T0033107.1 MGP_NODShiLtJ_G0019214.1 mouse_genomes_project 11 126337351 126338260 + Kif19a protein_coding retained_intron MGP_NODShiLtJ_T0033108.1 MGP_NODShiLtJ_G0019214.1 mouse_genomes_project 11 126340595 126343433 + MGP_NODShiLtJ_P0033108 Kif19a protein_coding protein_coding MGP_NODShiLtJ_T0033109.1 MGP_NODShiLtJ_G0019214.1 mouse_genomes_project 11 126340637 126342026 + Kif19a protein_coding retained_intron MGP_NODShiLtJ_T0012448.1 MGP_NODShiLtJ_G0010556.1 mouse_genomes_project 11 43535113 43535579 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031019.1 MGP_NODShiLtJ_G0018693.1 mouse_genomes_project 11 91151652 91155988 - MGP_NODShiLtJ_P0031019 Pex12 protein_coding protein_coding MGP_NODShiLtJ_T0031020.1 MGP_NODShiLtJ_G0018693.1 mouse_genomes_project 11 91152085 91155906 - MGP_NODShiLtJ_P0031020 Pex12 protein_coding protein_coding MGP_NODShiLtJ_T0031021.1 MGP_NODShiLtJ_G0018693.1 mouse_genomes_project 11 91152085 91155953 - MGP_NODShiLtJ_P0031021 Pex12 protein_coding protein_coding MGP_NODShiLtJ_T0031022.1 MGP_NODShiLtJ_G0018693.1 mouse_genomes_project 11 91152086 91155908 - MGP_NODShiLtJ_P0031022 Pex12 protein_coding protein_coding MGP_NODShiLtJ_T0031023.1 MGP_NODShiLtJ_G0018693.1 mouse_genomes_project 11 91154914 91155949 - Pex12 protein_coding processed_transcript MGP_NODShiLtJ_T0031024.1 MGP_NODShiLtJ_G0018693.1 mouse_genomes_project 11 91155040 91159597 - MGP_NODShiLtJ_P0031024 Pex12 protein_coding protein_coding MGP_NODShiLtJ_T0031025.1 MGP_NODShiLtJ_G0018693.1 mouse_genomes_project 11 91155339 91155969 - MGP_NODShiLtJ_P0031025 Pex12 protein_coding protein_coding MGP_NODShiLtJ_T0033422.1 MGP_NODShiLtJ_G0019277.1 mouse_genomes_project 11 127978680 127996561 - MGP_NODShiLtJ_P0033422 Evpl protein_coding protein_coding MGP_NODShiLtJ_T0003276.1 MGP_NODShiLtJ_G0003021.1 mouse_genomes_project 11 119380869 119385486 - Cep112os1 antisense antisense MGP_NODShiLtJ_T0028309.1 MGP_NODShiLtJ_G0018010.1 mouse_genomes_project 11 36951435 37563623 + MGP_NODShiLtJ_P0028309 Slit3 protein_coding protein_coding MGP_NODShiLtJ_T0028310.1 MGP_NODShiLtJ_G0018010.1 mouse_genomes_project 11 37002140 37069521 + Slit3 protein_coding processed_transcript MGP_NODShiLtJ_T0028311.1 MGP_NODShiLtJ_G0018010.1 mouse_genomes_project 11 37008310 37351429 + Slit3 protein_coding processed_transcript MGP_NODShiLtJ_T0028312.1 MGP_NODShiLtJ_G0018010.1 mouse_genomes_project 11 37389064 37457415 + Slit3 protein_coding processed_transcript MGP_NODShiLtJ_T0030307.1 MGP_NODShiLtJ_G0018502.1 mouse_genomes_project 11 79967198 79968717 - MGP_NODShiLtJ_P0030307 Emc6 protein_coding protein_coding MGP_NODShiLtJ_T0030308.1 MGP_NODShiLtJ_G0018502.1 mouse_genomes_project 11 79968015 79968682 - MGP_NODShiLtJ_P0030308 Emc6 protein_coding protein_coding MGP_NODShiLtJ_T0027744.1 MGP_NODShiLtJ_G0017876.1 mouse_genomes_project 11 3429889 3434369 - MGP_NODShiLtJ_P0027744 Tmed4 protein_coding protein_coding MGP_NODShiLtJ_T0027745.1 MGP_NODShiLtJ_G0017876.1 mouse_genomes_project 11 3431181 3434369 - Tmed4 protein_coding retained_intron MGP_NODShiLtJ_T0027746.1 MGP_NODShiLtJ_G0017876.1 mouse_genomes_project 11 3433239 3434364 - MGP_NODShiLtJ_P0027746 Tmed4 protein_coding protein_coding MGP_NODShiLtJ_T0006118.1 MGP_NODShiLtJ_G0005105.1 mouse_genomes_project 11 19086652 19087953 - Gm12027 lincRNA lincRNA MGP_NODShiLtJ_T0097899.1 MGP_NODShiLtJ_G0036311.1 mouse_genomes_project 11 94553099 94553219 + Gm23667 rRNA rRNA MGP_NODShiLtJ_T0033696.1 MGP_NODShiLtJ_G0019334.1 mouse_genomes_project 11 131302043 131319256 + MGP_NODShiLtJ_P0033696 Gaa protein_coding protein_coding MGP_NODShiLtJ_T0033697.1 MGP_NODShiLtJ_G0019334.1 mouse_genomes_project 11 131302182 131319256 + MGP_NODShiLtJ_P0033697 Gaa protein_coding protein_coding MGP_NODShiLtJ_T0033698.1 MGP_NODShiLtJ_G0019334.1 mouse_genomes_project 11 131302184 131307609 + MGP_NODShiLtJ_P0033698 Gaa protein_coding protein_coding MGP_NODShiLtJ_T0033699.1 MGP_NODShiLtJ_G0019334.1 mouse_genomes_project 11 131304672 131309296 + Gaa protein_coding processed_transcript MGP_NODShiLtJ_T0033700.1 MGP_NODShiLtJ_G0019334.1 mouse_genomes_project 11 131308724 131312483 + MGP_NODShiLtJ_P0033700 Gaa protein_coding protein_coding MGP_NODShiLtJ_T0033701.1 MGP_NODShiLtJ_G0019334.1 mouse_genomes_project 11 131309012 131309777 + MGP_NODShiLtJ_P0033701 Gaa protein_coding protein_coding MGP_NODShiLtJ_T0033702.1 MGP_NODShiLtJ_G0019334.1 mouse_genomes_project 11 131311870 131315369 + MGP_NODShiLtJ_P0033702 Gaa protein_coding protein_coding MGP_NODShiLtJ_T0033703.1 MGP_NODShiLtJ_G0019334.1 mouse_genomes_project 11 131313032 131313645 + Gaa protein_coding processed_transcript MGP_NODShiLtJ_T0012665.1 MGP_NODShiLtJ_G0010773.1 mouse_genomes_project 11 129854955 129855449 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003132.1 MGP_NODShiLtJ_G0002904.1 mouse_genomes_project 11 65339610 65347992 + Gm16062 antisense antisense MGP_NODShiLtJ_T0027570.1 MGP_NODShiLtJ_G0017837.1 mouse_genomes_project 11 1162991 1166237 + Osm protein_coding processed_transcript MGP_NODShiLtJ_T0027571.1 MGP_NODShiLtJ_G0017837.1 mouse_genomes_project 11 1162991 1167599 + MGP_NODShiLtJ_P0027571 Osm protein_coding protein_coding MGP_NODShiLtJ_T0003090.1 MGP_NODShiLtJ_G0002865.1 mouse_genomes_project 11 35605731 35612742 + Gm12120 antisense antisense MGP_NODShiLtJ_T0029988.1 MGP_NODShiLtJ_G0018433.1 mouse_genomes_project 11 76712704 76718157 - MGP_NODShiLtJ_P0029988 Slc16a13 protein_coding protein_coding MGP_NODShiLtJ_T0029989.1 MGP_NODShiLtJ_G0018433.1 mouse_genomes_project 11 76714653 76717971 - MGP_NODShiLtJ_P0029989 Slc16a13 protein_coding protein_coding MGP_NODShiLtJ_T0029990.1 MGP_NODShiLtJ_G0018433.1 mouse_genomes_project 11 76715091 76718227 - MGP_NODShiLtJ_P0029990 Slc16a13 protein_coding protein_coding MGP_NODShiLtJ_T0029991.1 MGP_NODShiLtJ_G0018433.1 mouse_genomes_project 11 76715204 76717947 - MGP_NODShiLtJ_P0029991 Slc16a13 protein_coding protein_coding MGP_NODShiLtJ_T0033322.1 MGP_NODShiLtJ_G0019260.1 mouse_genomes_project 11 127594659 127632251 + MGP_NODShiLtJ_P0033322 Myo15b protein_coding protein_coding MGP_NODShiLtJ_T0033323.1 MGP_NODShiLtJ_G0019260.1 mouse_genomes_project 11 127617182 127619839 + Myo15b protein_coding processed_transcript MGP_NODShiLtJ_T0033324.1 MGP_NODShiLtJ_G0019260.1 mouse_genomes_project 11 127617200 127620946 + MGP_NODShiLtJ_P0033324 Myo15b protein_coding protein_coding MGP_NODShiLtJ_T0033325.1 MGP_NODShiLtJ_G0019260.1 mouse_genomes_project 11 127620108 127627120 + MGP_NODShiLtJ_P0033325 Myo15b protein_coding protein_coding MGP_NODShiLtJ_T0033326.1 MGP_NODShiLtJ_G0019260.1 mouse_genomes_project 11 127626111 127627121 + MGP_NODShiLtJ_P0033326 Myo15b protein_coding protein_coding MGP_NODShiLtJ_T0033327.1 MGP_NODShiLtJ_G0019260.1 mouse_genomes_project 11 127626482 127632247 + Myo15b protein_coding retained_intron MGP_NODShiLtJ_T0033328.1 MGP_NODShiLtJ_G0019260.1 mouse_genomes_project 11 127627275 127632262 + MGP_NODShiLtJ_P0033328 Myo15b protein_coding protein_coding MGP_NODShiLtJ_T0033329.1 MGP_NODShiLtJ_G0019260.1 mouse_genomes_project 11 127629897 127630828 + Myo15b protein_coding retained_intron MGP_NODShiLtJ_T0006249.1 MGP_NODShiLtJ_G0005210.1 mouse_genomes_project 11 97566581 97568868 - Gm11497 lincRNA lincRNA MGP_NODShiLtJ_T0032663.1 MGP_NODShiLtJ_G0019114.1 mouse_genomes_project 11 113517930 113566622 - MGP_NODShiLtJ_P0032663 Map3k14 protein_coding protein_coding MGP_NODShiLtJ_T0032664.1 MGP_NODShiLtJ_G0019114.1 mouse_genomes_project 11 113518973 113520016 - Map3k14 protein_coding processed_transcript MGP_NODShiLtJ_T0032665.1 MGP_NODShiLtJ_G0019114.1 mouse_genomes_project 11 113535579 113540825 - Map3k14 protein_coding processed_transcript MGP_NODShiLtJ_T0032666.1 MGP_NODShiLtJ_G0019114.1 mouse_genomes_project 11 113537883 113538684 - Map3k14 protein_coding processed_transcript MGP_NODShiLtJ_T0033291.1 MGP_NODShiLtJ_G0019256.1 mouse_genomes_project 11 127494535 127530242 + MGP_NODShiLtJ_P0033291 Tmem94 protein_coding protein_coding MGP_NODShiLtJ_T0033292.1 MGP_NODShiLtJ_G0019256.1 mouse_genomes_project 11 127494544 127516797 + MGP_NODShiLtJ_P0033292 Tmem94 protein_coding protein_coding MGP_NODShiLtJ_T0033293.1 MGP_NODShiLtJ_G0019256.1 mouse_genomes_project 11 127494545 127517121 + MGP_NODShiLtJ_P0033293 Tmem94 protein_coding protein_coding MGP_NODShiLtJ_T0033294.1 MGP_NODShiLtJ_G0019256.1 mouse_genomes_project 11 127494556 127517040 + MGP_NODShiLtJ_P0033294 Tmem94 protein_coding protein_coding MGP_NODShiLtJ_T0033295.1 MGP_NODShiLtJ_G0019256.1 mouse_genomes_project 11 127495823 127505649 + Tmem94 protein_coding processed_transcript MGP_NODShiLtJ_T0033296.1 MGP_NODShiLtJ_G0019256.1 mouse_genomes_project 11 127504038 127529909 + MGP_NODShiLtJ_P0033296 Tmem94 protein_coding protein_coding MGP_NODShiLtJ_T0033297.1 MGP_NODShiLtJ_G0019256.1 mouse_genomes_project 11 127519854 127522817 + MGP_NODShiLtJ_P0033297 Tmem94 protein_coding protein_coding MGP_NODShiLtJ_T0030843.1 MGP_NODShiLtJ_G0018642.1 mouse_genomes_project 11 86514922 86647257 - MGP_NODShiLtJ_P0030843 Ksr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030844.1 MGP_NODShiLtJ_G0018642.1 mouse_genomes_project 11 86514931 86647415 - MGP_NODShiLtJ_P0030844 Ksr1 protein_coding protein_coding MGP_NODShiLtJ_T0030845.1 MGP_NODShiLtJ_G0018642.1 mouse_genomes_project 11 86528192 86647415 - MGP_NODShiLtJ_P0030845 Ksr1 protein_coding protein_coding MGP_NODShiLtJ_T0030846.1 MGP_NODShiLtJ_G0018642.1 mouse_genomes_project 11 86546648 86561604 - MGP_NODShiLtJ_P0030846 Ksr1 protein_coding protein_coding MGP_NODShiLtJ_T0030847.1 MGP_NODShiLtJ_G0018642.1 mouse_genomes_project 11 86546911 86559356 - MGP_NODShiLtJ_P0030847 Ksr1 protein_coding protein_coding MGP_NODShiLtJ_T0030225.1 MGP_NODShiLtJ_G0018479.1 mouse_genomes_project 11 78920539 78923428 - MGP_NODShiLtJ_P0030225 Gm43951 protein_coding protein_coding MGP_NODShiLtJ_T0031385.1 MGP_NODShiLtJ_G0018787.1 mouse_genomes_project 11 98705647 98771789 + Mmd protein_coding processed_transcript MGP_NODShiLtJ_T0031386.1 MGP_NODShiLtJ_G0018787.1 mouse_genomes_project 11 98705647 98774157 + Mmd protein_coding processed_transcript MGP_NODShiLtJ_T0031387.1 MGP_NODShiLtJ_G0018787.1 mouse_genomes_project 11 98705649 98750953 + Mmd protein_coding processed_transcript MGP_NODShiLtJ_T0031388.1 MGP_NODShiLtJ_G0018787.1 mouse_genomes_project 11 98772348 98791191 + MGP_NODShiLtJ_P0031388 Mmd protein_coding protein_coding MGP_NODShiLtJ_T0031389.1 MGP_NODShiLtJ_G0018787.1 mouse_genomes_project 11 98772368 98801297 + MGP_NODShiLtJ_P0031389 Mmd protein_coding protein_coding MGP_NODShiLtJ_T0029045.1 MGP_NODShiLtJ_G0018217.1 mouse_genomes_project 11 63996435 63997407 - MGP_NODShiLtJ_P0029045 Olfr323 protein_coding protein_coding MGP_NODShiLtJ_T0029046.1 MGP_NODShiLtJ_G0018217.1 mouse_genomes_project 11 63996435 63997404 - MGP_NODShiLtJ_P0029046 Olfr323 protein_coding protein_coding MGP_NODShiLtJ_T0030552.1 MGP_NODShiLtJ_G0018577.1 mouse_genomes_project 11 83396301 83433295 + Fam57a protein_coding processed_transcript MGP_NODShiLtJ_T0030553.1 MGP_NODShiLtJ_G0018577.1 mouse_genomes_project 11 83420631 83421594 + Fam57a protein_coding retained_intron MGP_NODShiLtJ_T0030554.1 MGP_NODShiLtJ_G0018577.1 mouse_genomes_project 11 83420668 83427750 + MGP_NODShiLtJ_P0030554 Fam57a protein_coding protein_coding MGP_NODShiLtJ_T0030555.1 MGP_NODShiLtJ_G0018577.1 mouse_genomes_project 11 83420701 83426655 + MGP_NODShiLtJ_P0030555 Fam57a protein_coding protein_coding MGP_NODShiLtJ_T0033500.1 MGP_NODShiLtJ_G0019293.1 mouse_genomes_project 11 128461382 128465533 + MGP_NODShiLtJ_P0033500 1810032O08Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033501.1 MGP_NODShiLtJ_G0019293.1 mouse_genomes_project 11 128461391 128465533 + MGP_NODShiLtJ_P0033501 1810032O08Rik protein_coding protein_coding MGP_NODShiLtJ_T0033502.1 MGP_NODShiLtJ_G0019293.1 mouse_genomes_project 11 128461391 128465530 + MGP_NODShiLtJ_P0033502 1810032O08Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033503.1 MGP_NODShiLtJ_G0019293.1 mouse_genomes_project 11 128461418 128462348 + 1810032O08Rik protein_coding retained_intron MGP_NODShiLtJ_T0033504.1 MGP_NODShiLtJ_G0019293.1 mouse_genomes_project 11 128461430 128464315 + MGP_NODShiLtJ_P0033504 1810032O08Rik protein_coding protein_coding MGP_NODShiLtJ_T0033505.1 MGP_NODShiLtJ_G0019293.1 mouse_genomes_project 11 128461603 128463700 + MGP_NODShiLtJ_P0033505 1810032O08Rik protein_coding protein_coding MGP_NODShiLtJ_T0033506.1 MGP_NODShiLtJ_G0019293.1 mouse_genomes_project 11 128462417 128465534 + MGP_NODShiLtJ_P0033506 1810032O08Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006121.1 MGP_NODShiLtJ_G0005108.1 mouse_genomes_project 11 22369158 22370029 - Gm12050 lincRNA lincRNA MGP_NODShiLtJ_T0000827.1 MGP_NODShiLtJ_G0000757.1 mouse_genomes_project 11 49071425 49071728 - TEC TEC MGP_NODShiLtJ_T0009658.1 MGP_NODShiLtJ_G0007791.1 mouse_genomes_project 11 111453744 111453823 - Gm25593 miRNA miRNA MGP_NODShiLtJ_T0029362.1 MGP_NODShiLtJ_G0018299.1 mouse_genomes_project 11 67593767 67660332 - MGP_NODShiLtJ_P0029362 Akap10 protein_coding protein_coding MGP_NODShiLtJ_T0029363.1 MGP_NODShiLtJ_G0018299.1 mouse_genomes_project 11 67597286 67660574 - MGP_NODShiLtJ_P0029363 Akap10 protein_coding protein_coding MGP_NODShiLtJ_T0029364.1 MGP_NODShiLtJ_G0018299.1 mouse_genomes_project 11 67597650 67606083 - Akap10 protein_coding processed_transcript MGP_NODShiLtJ_T0029365.1 MGP_NODShiLtJ_G0018299.1 mouse_genomes_project 11 67619401 67660548 - MGP_NODShiLtJ_P0029365 Akap10 protein_coding protein_coding MGP_NODShiLtJ_T0029366.1 MGP_NODShiLtJ_G0018299.1 mouse_genomes_project 11 67652053 67660529 - Akap10 protein_coding processed_transcript MGP_NODShiLtJ_T0030788.1 MGP_NODShiLtJ_G0018624.1 mouse_genomes_project 11 85783354 85798393 + MGP_NODShiLtJ_P0030788 Pigs protein_coding protein_coding MGP_NODShiLtJ_T0028342.1 MGP_NODShiLtJ_G0018018.1 mouse_genomes_project 11 43788438 43794818 + MGP_NODShiLtJ_P0028342 Nudcd2 protein_coding protein_coding MGP_NODShiLtJ_T0028343.1 MGP_NODShiLtJ_G0018018.1 mouse_genomes_project 11 43788515 43791184 + Nudcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0028344.1 MGP_NODShiLtJ_G0018018.1 mouse_genomes_project 11 43788717 43794322 + MGP_NODShiLtJ_P0028344 Nudcd2 protein_coding protein_coding MGP_NODShiLtJ_T0028345.1 MGP_NODShiLtJ_G0018018.1 mouse_genomes_project 11 43788976 43794255 + Nudcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0028346.1 MGP_NODShiLtJ_G0018018.1 mouse_genomes_project 11 43791077 43794036 + Nudcd2 protein_coding processed_transcript MGP_NODShiLtJ_T0017064.1 MGP_NODShiLtJ_G0015041.1 mouse_genomes_project 11 63052445 63060820 - 2010001A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017065.1 MGP_NODShiLtJ_G0015041.1 mouse_genomes_project 11 63052546 63060801 - 2010001A14Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0033749.1 MGP_NODShiLtJ_G0019343.1 mouse_genomes_project 11 131991342 131993607 + MGP_NODShiLtJ_P0033749 Chmp6 protein_coding protein_coding MGP_NODShiLtJ_T0033750.1 MGP_NODShiLtJ_G0019343.1 mouse_genomes_project 11 131991387 131997051 + MGP_NODShiLtJ_P0033750 Chmp6 protein_coding protein_coding MGP_NODShiLtJ_T0033751.1 MGP_NODShiLtJ_G0019343.1 mouse_genomes_project 11 131993334 131996561 + Chmp6 protein_coding retained_intron MGP_NODShiLtJ_T0033752.1 MGP_NODShiLtJ_G0019343.1 mouse_genomes_project 11 131994243 131996141 + Chmp6 protein_coding retained_intron MGP_NODShiLtJ_T0029589.1 MGP_NODShiLtJ_G0018351.1 mouse_genomes_project 11 74862617 74864677 + MGP_NODShiLtJ_P0029589 Mfsd6l protein_coding protein_coding MGP_NODShiLtJ_T0028258.1 MGP_NODShiLtJ_G0017993.1 mouse_genomes_project 11 34259028 34358796 + MGP_NODShiLtJ_P0028258 Stk10 protein_coding protein_coding MGP_NODShiLtJ_T0028259.1 MGP_NODShiLtJ_G0017993.1 mouse_genomes_project 11 34318869 34330681 + Stk10 protein_coding retained_intron MGP_NODShiLtJ_T0029022.1 MGP_NODShiLtJ_G0018203.1 mouse_genomes_project 11 63667643 63686630 + MGP_NODShiLtJ_P0029022 Sh3bp5l protein_coding protein_coding MGP_NODShiLtJ_T0029023.1 MGP_NODShiLtJ_G0018203.1 mouse_genomes_project 11 63667669 63686627 + MGP_NODShiLtJ_P0029023 Sh3bp5l protein_coding protein_coding MGP_NODShiLtJ_T0029024.1 MGP_NODShiLtJ_G0018203.1 mouse_genomes_project 11 63667962 63668429 + Sh3bp5l protein_coding processed_transcript MGP_NODShiLtJ_T0029025.1 MGP_NODShiLtJ_G0018203.1 mouse_genomes_project 11 63668194 63686622 + Sh3bp5l protein_coding processed_transcript MGP_NODShiLtJ_T0029026.1 MGP_NODShiLtJ_G0018203.1 mouse_genomes_project 11 63684212 63685852 + Sh3bp5l protein_coding processed_transcript MGP_NODShiLtJ_T0028833.1 MGP_NODShiLtJ_G0018154.1 mouse_genomes_project 11 58543926 58601923 - MGP_NODShiLtJ_P0028833 Rad50 protein_coding protein_coding MGP_NODShiLtJ_T0028834.1 MGP_NODShiLtJ_G0018154.1 mouse_genomes_project 11 58569099 58601923 - MGP_NODShiLtJ_P0028834 Rad50 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028835.1 MGP_NODShiLtJ_G0018154.1 mouse_genomes_project 11 58575028 58576418 - Rad50 protein_coding processed_transcript MGP_NODShiLtJ_T0028836.1 MGP_NODShiLtJ_G0018154.1 mouse_genomes_project 11 58579152 58601899 - MGP_NODShiLtJ_P0028836 Rad50 protein_coding protein_coding MGP_NODShiLtJ_T0028837.1 MGP_NODShiLtJ_G0018154.1 mouse_genomes_project 11 58585432 58589677 - Rad50 protein_coding processed_transcript MGP_NODShiLtJ_T0003131.1 MGP_NODShiLtJ_G0002903.1 mouse_genomes_project 11 65304793 65309891 - Gm12264 antisense antisense MGP_NODShiLtJ_T0031097.1 MGP_NODShiLtJ_G0018717.1 mouse_genomes_project 11 92069573 92090588 - MGP_NODShiLtJ_P0031097 Gm11437 protein_coding protein_coding MGP_NODShiLtJ_T0031901.1 MGP_NODShiLtJ_G0018911.1 mouse_genomes_project 11 108182167 108187183 + MGP_NODShiLtJ_P0031901 Grb7 protein_coding protein_coding MGP_NODShiLtJ_T0031902.1 MGP_NODShiLtJ_G0018911.1 mouse_genomes_project 11 108182607 108191139 + MGP_NODShiLtJ_P0031902 Grb7 protein_coding protein_coding MGP_NODShiLtJ_T0031903.1 MGP_NODShiLtJ_G0018911.1 mouse_genomes_project 11 108182821 108191139 + Grb7 protein_coding retained_intron MGP_NODShiLtJ_T0031904.1 MGP_NODShiLtJ_G0018911.1 mouse_genomes_project 11 108182841 108191139 + Grb7 protein_coding retained_intron MGP_NODShiLtJ_T0031905.1 MGP_NODShiLtJ_G0018911.1 mouse_genomes_project 11 108187607 108189588 + Grb7 protein_coding retained_intron MGP_NODShiLtJ_T0031906.1 MGP_NODShiLtJ_G0018911.1 mouse_genomes_project 11 108189554 108190891 + Grb7 protein_coding retained_intron MGP_NODShiLtJ_T0033880.1 MGP_NODShiLtJ_G0019371.1 mouse_genomes_project 11 132743124 132743741 + MGP_NODShiLtJ_P0033880 Npb protein_coding protein_coding MGP_NODShiLtJ_T0033881.1 MGP_NODShiLtJ_G0019371.1 mouse_genomes_project 11 132743124 132743741 + MGP_NODShiLtJ_P0033881 Npb protein_coding protein_coding MGP_NODShiLtJ_T0033882.1 MGP_NODShiLtJ_G0019371.1 mouse_genomes_project 11 132743152 132743681 + MGP_NODShiLtJ_P0033882 Npb protein_coding protein_coding MGP_NODShiLtJ_T0031536.1 MGP_NODShiLtJ_G0018818.1 mouse_genomes_project 11 104028890 104030100 + MGP_NODShiLtJ_P0031536 Cdc34b protein_coding protein_coding MGP_NODShiLtJ_T0031537.1 MGP_NODShiLtJ_G0018818.1 mouse_genomes_project 11 104028890 104030547 + MGP_NODShiLtJ_P0031537 Cdc34b protein_coding protein_coding MGP_NODShiLtJ_T0032034.1 MGP_NODShiLtJ_G0018954.1 mouse_genomes_project 11 109467472 109475106 - MGP_NODShiLtJ_P0032034 Krtap9-3 protein_coding protein_coding MGP_NODShiLtJ_T0032003.1 MGP_NODShiLtJ_G0018933.1 mouse_genomes_project 11 108981439 108992252 - MGP_NODShiLtJ_P0032003 Ccr7 protein_coding protein_coding MGP_NODShiLtJ_T0027920.1 MGP_NODShiLtJ_G0017917.1 mouse_genomes_project 11 17291193 17305036 - MGP_NODShiLtJ_P0027920 Etaa1 protein_coding protein_coding MGP_NODShiLtJ_T0031181.1 MGP_NODShiLtJ_G0018732.1 mouse_genomes_project 11 93930088 93939486 + MGP_NODShiLtJ_P0031181 Tbx2 protein_coding protein_coding MGP_NODShiLtJ_T0031058.1 MGP_NODShiLtJ_G0018704.1 mouse_genomes_project 11 91529251 91529827 - MGP_NODShiLtJ_P0031058 Rpl9-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0009575.1 MGP_NODShiLtJ_G0007708.1 mouse_genomes_project 11 37641039 37641125 + Mir103-1 miRNA miRNA MGP_NODShiLtJ_T0030943.1 MGP_NODShiLtJ_G0018664.1 mouse_genomes_project 11 88102752 88435018 - MGP_NODShiLtJ_P0030943 Myo1d protein_coding protein_coding MGP_NODShiLtJ_T0030944.1 MGP_NODShiLtJ_G0018664.1 mouse_genomes_project 11 88209479 88435018 - MGP_NODShiLtJ_P0030944 Myo1d protein_coding protein_coding MGP_NODShiLtJ_T0030945.1 MGP_NODShiLtJ_G0018664.1 mouse_genomes_project 11 88321145 88434996 - Myo1d protein_coding retained_intron MGP_NODShiLtJ_T0009627.1 MGP_NODShiLtJ_G0007760.1 mouse_genomes_project 11 85503695 85503767 - Mir451b miRNA miRNA MGP_NODShiLtJ_T0003247.1 MGP_NODShiLtJ_G0002994.1 mouse_genomes_project 11 111744683 111750185 - antisense antisense MGP_NODShiLtJ_T0012432.1 MGP_NODShiLtJ_G0010540.1 mouse_genomes_project 11 32481388 32482368 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012413.1 MGP_NODShiLtJ_G0010521.1 mouse_genomes_project 11 27696765 27696984 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029239.1 MGP_NODShiLtJ_G0018275.1 mouse_genomes_project 11 66354277 66405279 - MGP_NODShiLtJ_P0029239 Top3a protein_coding protein_coding MGP_NODShiLtJ_T0029240.1 MGP_NODShiLtJ_G0018275.1 mouse_genomes_project 11 66354278 66405201 - MGP_NODShiLtJ_P0029240 Top3a protein_coding protein_coding MGP_NODShiLtJ_T0029241.1 MGP_NODShiLtJ_G0018275.1 mouse_genomes_project 11 66356110 66405179 - MGP_NODShiLtJ_P0029241 Top3a protein_coding protein_coding MGP_NODShiLtJ_T0029242.1 MGP_NODShiLtJ_G0018275.1 mouse_genomes_project 11 66356453 66405178 - MGP_NODShiLtJ_P0029242 Top3a protein_coding protein_coding MGP_NODShiLtJ_T0029243.1 MGP_NODShiLtJ_G0018275.1 mouse_genomes_project 11 66370461 66373684 - Top3a protein_coding retained_intron MGP_NODShiLtJ_T0029244.1 MGP_NODShiLtJ_G0018275.1 mouse_genomes_project 11 66386555 66405213 - MGP_NODShiLtJ_P0029244 Top3a protein_coding protein_coding MGP_NODShiLtJ_T0027589.1 MGP_NODShiLtJ_G0017842.1 mouse_genomes_project 11 1620354 1669396 + MGP_NODShiLtJ_P0027589 Ascc2 protein_coding protein_coding MGP_NODShiLtJ_T0027590.1 MGP_NODShiLtJ_G0017842.1 mouse_genomes_project 11 1620354 1671715 + MGP_NODShiLtJ_P0027590 Ascc2 protein_coding protein_coding MGP_NODShiLtJ_T0032558.1 MGP_NODShiLtJ_G0019091.1 mouse_genomes_project 11 112730389 112811770 - MGP_NODShiLtJ_P0032558 Gpatch8 protein_coding protein_coding MGP_NODShiLtJ_T0032559.1 MGP_NODShiLtJ_G0019091.1 mouse_genomes_project 11 112731680 112763447 - Gpatch8 protein_coding processed_transcript MGP_NODShiLtJ_T0032560.1 MGP_NODShiLtJ_G0019091.1 mouse_genomes_project 11 112762493 112811770 - Gpatch8 protein_coding processed_transcript MGP_NODShiLtJ_T0032561.1 MGP_NODShiLtJ_G0019091.1 mouse_genomes_project 11 112763172 112811770 - Gpatch8 protein_coding processed_transcript MGP_NODShiLtJ_T0032562.1 MGP_NODShiLtJ_G0019091.1 mouse_genomes_project 11 112791834 112811747 - Gpatch8 protein_coding processed_transcript MGP_NODShiLtJ_T0032563.1 MGP_NODShiLtJ_G0019091.1 mouse_genomes_project 11 112792724 112811963 - Gpatch8 protein_coding processed_transcript MGP_NODShiLtJ_T0031721.1 MGP_NODShiLtJ_G0018868.1 mouse_genomes_project 11 106541354 106567990 - MGP_NODShiLtJ_P0031721 Sp2 protein_coding protein_coding MGP_NODShiLtJ_T0031722.1 MGP_NODShiLtJ_G0018868.1 mouse_genomes_project 11 106541355 106568013 - MGP_NODShiLtJ_P0031722 Sp2 protein_coding protein_coding MGP_NODShiLtJ_T0031723.1 MGP_NODShiLtJ_G0018868.1 mouse_genomes_project 11 106541487 106558972 - MGP_NODShiLtJ_P0031723 Sp2 protein_coding protein_coding MGP_NODShiLtJ_T0031724.1 MGP_NODShiLtJ_G0018868.1 mouse_genomes_project 11 106542233 106573274 - MGP_NODShiLtJ_P0031724 Sp2 protein_coding protein_coding MGP_NODShiLtJ_T0027836.1 MGP_NODShiLtJ_G0017898.1 mouse_genomes_project 11 6707812 6753533 + Abca13 protein_coding processed_transcript MGP_NODShiLtJ_T0027837.1 MGP_NODShiLtJ_G0017898.1 mouse_genomes_project 11 6707812 7277849 + MGP_NODShiLtJ_P0027837 Abca13 protein_coding protein_coding MGP_NODShiLtJ_T0027838.1 MGP_NODShiLtJ_G0017898.1 mouse_genomes_project 11 6709322 6794030 + MGP_NODShiLtJ_P0027838 Abca13 protein_coding protein_coding MGP_NODShiLtJ_T0017062.1 MGP_NODShiLtJ_G0015040.1 mouse_genomes_project 11 58452023 58454642 - A430108G06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017063.1 MGP_NODShiLtJ_G0015040.1 mouse_genomes_project 11 58452099 58454650 - A430108G06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017054.1 MGP_NODShiLtJ_G0015034.1 mouse_genomes_project 11 32297594 32304349 + Gm12100 processed_transcript processed_transcript MGP_NODShiLtJ_T0034044.1 MGP_NODShiLtJ_G0019401.1 mouse_genomes_project 11 133461436 133512806 + MGP_NODShiLtJ_P0034044 Foxk2 protein_coding protein_coding MGP_NODShiLtJ_T0034045.1 MGP_NODShiLtJ_G0019401.1 mouse_genomes_project 11 133491894 133498240 + Foxk2 protein_coding processed_transcript MGP_NODShiLtJ_T0034046.1 MGP_NODShiLtJ_G0019401.1 mouse_genomes_project 11 133499651 133501032 + Foxk2 protein_coding retained_intron MGP_NODShiLtJ_T0029813.1 MGP_NODShiLtJ_G0018399.1 mouse_genomes_project 11 76181717 76207893 - MGP_NODShiLtJ_P0029813 Polr2a protein_coding protein_coding MGP_NODShiLtJ_T0029814.1 MGP_NODShiLtJ_G0018399.1 mouse_genomes_project 11 76182130 76207478 - MGP_NODShiLtJ_P0029814 Polr2a protein_coding protein_coding MGP_NODShiLtJ_T0029815.1 MGP_NODShiLtJ_G0018399.1 mouse_genomes_project 11 76183912 76185050 - Polr2a protein_coding processed_transcript MGP_NODShiLtJ_T0029816.1 MGP_NODShiLtJ_G0018399.1 mouse_genomes_project 11 76189325 76190272 - Polr2a protein_coding processed_transcript MGP_NODShiLtJ_T0098667.1 MGP_NODShiLtJ_G0037061.1 mouse_genomes_project 11 15980439 15980546 - Gm25698 snRNA snRNA MGP_NODShiLtJ_T0097889.1 MGP_NODShiLtJ_G0036301.1 mouse_genomes_project 11 23771760 23771877 - Gm23114 rRNA rRNA MGP_NODShiLtJ_T0003101.1 MGP_NODShiLtJ_G0002876.1 mouse_genomes_project 11 50306836 50309609 + Gm12167 antisense antisense MGP_NODShiLtJ_T0031106.1 MGP_NODShiLtJ_G0018718.1 mouse_genomes_project 11 92372297 92473725 - MGP_NODShiLtJ_P0031106 Aatf protein_coding protein_coding MGP_NODShiLtJ_T0031107.1 MGP_NODShiLtJ_G0018718.1 mouse_genomes_project 11 92372325 92449190 - Aatf protein_coding processed_transcript MGP_NODShiLtJ_T0031108.1 MGP_NODShiLtJ_G0018718.1 mouse_genomes_project 11 92393051 92400076 - Aatf protein_coding retained_intron MGP_NODShiLtJ_T0031109.1 MGP_NODShiLtJ_G0018718.1 mouse_genomes_project 11 92418539 92473725 - Aatf protein_coding retained_intron MGP_NODShiLtJ_T0033142.1 MGP_NODShiLtJ_G0019227.1 mouse_genomes_project 11 126715640 126725986 - MGP_NODShiLtJ_P0033142 Cd300e protein_coding protein_coding MGP_NODShiLtJ_T0006268.1 MGP_NODShiLtJ_G0005223.1 mouse_genomes_project 11 110080959 110087344 - Gm12347 lincRNA lincRNA MGP_NODShiLtJ_T0000818.1 MGP_NODShiLtJ_G0000748.1 mouse_genomes_project 11 7300161 7300524 - TEC TEC MGP_NODShiLtJ_T0027978.1 MGP_NODShiLtJ_G0017931.1 mouse_genomes_project 11 21341262 21456225 + MGP_NODShiLtJ_P0027978 Wdpcp protein_coding protein_coding MGP_NODShiLtJ_T0027979.1 MGP_NODShiLtJ_G0017931.1 mouse_genomes_project 11 21341262 21732451 + MGP_NODShiLtJ_P0027979 Wdpcp protein_coding protein_coding MGP_NODShiLtJ_T0027980.1 MGP_NODShiLtJ_G0017931.1 mouse_genomes_project 11 21341332 21490043 + Wdpcp protein_coding processed_transcript MGP_NODShiLtJ_T0027981.1 MGP_NODShiLtJ_G0017931.1 mouse_genomes_project 11 21482056 21505131 + Wdpcp protein_coding processed_transcript MGP_NODShiLtJ_T0027982.1 MGP_NODShiLtJ_G0017931.1 mouse_genomes_project 11 21487603 21551876 + Wdpcp protein_coding processed_transcript MGP_NODShiLtJ_T0027983.1 MGP_NODShiLtJ_G0017931.1 mouse_genomes_project 11 21632173 21635976 + Wdpcp protein_coding processed_transcript MGP_NODShiLtJ_T0017127.1 MGP_NODShiLtJ_G0015075.1 mouse_genomes_project 11 107797008 107797976 - Gm11632 processed_transcript processed_transcript MGP_NODShiLtJ_T0030113.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77228553 77245492 - MGP_NODShiLtJ_P0030113 Camta2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030114.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77228553 77247046 - MGP_NODShiLtJ_P0030114 Camta2 protein_coding protein_coding MGP_NODShiLtJ_T0030115.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77228553 77247075 - MGP_NODShiLtJ_P0030115 Camta2 protein_coding protein_coding MGP_NODShiLtJ_T0030116.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77228553 77247208 - MGP_NODShiLtJ_P0030116 Camta2 protein_coding protein_coding MGP_NODShiLtJ_T0030117.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77228553 77247056 - MGP_NODShiLtJ_P0030117 Camta2 protein_coding protein_coding MGP_NODShiLtJ_T0030118.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77228553 77247046 - MGP_NODShiLtJ_P0030118 Camta2 protein_coding protein_coding MGP_NODShiLtJ_T0030119.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77228554 77247058 - MGP_NODShiLtJ_P0030119 Camta2 protein_coding protein_coding MGP_NODShiLtJ_T0030120.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77228556 77242879 - Camta2 protein_coding retained_intron MGP_NODShiLtJ_T0030121.1 MGP_NODShiLtJ_G0018460.1 mouse_genomes_project 11 77245016 77247051 - Camta2 protein_coding retained_intron MGP_NODShiLtJ_T0028856.1 MGP_NODShiLtJ_G0018159.1 mouse_genomes_project 11 58792206 58811394 - MGP_NODShiLtJ_P0028856 Slc22a5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031727.1 MGP_NODShiLtJ_G0018870.1 mouse_genomes_project 11 106622434 106626453 + MGP_NODShiLtJ_P0031727 Scrn2 protein_coding protein_coding MGP_NODShiLtJ_T0031728.1 MGP_NODShiLtJ_G0018870.1 mouse_genomes_project 11 106622448 106623702 + Scrn2 protein_coding retained_intron MGP_NODShiLtJ_T0031729.1 MGP_NODShiLtJ_G0018870.1 mouse_genomes_project 11 106622497 106626445 + Scrn2 protein_coding retained_intron MGP_NODShiLtJ_T0031730.1 MGP_NODShiLtJ_G0018870.1 mouse_genomes_project 11 106622630 106624772 + MGP_NODShiLtJ_P0031730 Scrn2 protein_coding protein_coding MGP_NODShiLtJ_T0031240.1 MGP_NODShiLtJ_G0018746.1 mouse_genomes_project 11 95211649 95252640 - MGP_NODShiLtJ_P0031240 Gdpd1 protein_coding protein_coding MGP_NODShiLtJ_T0031863.1 MGP_NODShiLtJ_G0018901.1 mouse_genomes_project 11 107867751 107912456 - MGP_NODShiLtJ_P0031863 Med1 protein_coding protein_coding MGP_NODShiLtJ_T0031864.1 MGP_NODShiLtJ_G0018901.1 mouse_genomes_project 11 107867754 107912633 - MGP_NODShiLtJ_P0031864 Med1 protein_coding protein_coding MGP_NODShiLtJ_T0031865.1 MGP_NODShiLtJ_G0018901.1 mouse_genomes_project 11 107868610 107880529 - Med1 protein_coding processed_transcript MGP_NODShiLtJ_T0031866.1 MGP_NODShiLtJ_G0018901.1 mouse_genomes_project 11 107873339 107876609 - Med1 protein_coding processed_transcript MGP_NODShiLtJ_T0031867.1 MGP_NODShiLtJ_G0018901.1 mouse_genomes_project 11 107885934 107897261 - Med1 protein_coding processed_transcript MGP_NODShiLtJ_T0031868.1 MGP_NODShiLtJ_G0018901.1 mouse_genomes_project 11 107886481 107912649 - Med1 protein_coding processed_transcript MGP_NODShiLtJ_T0029259.1 MGP_NODShiLtJ_G0018279.1 mouse_genomes_project 11 66496774 66512679 - MGP_NODShiLtJ_P0029259 Tmem11 protein_coding protein_coding MGP_NODShiLtJ_T0029260.1 MGP_NODShiLtJ_G0018279.1 mouse_genomes_project 11 66496774 66512913 - MGP_NODShiLtJ_P0029260 Tmem11 protein_coding protein_coding MGP_NODShiLtJ_T0029261.1 MGP_NODShiLtJ_G0018279.1 mouse_genomes_project 11 66497312 66512428 - MGP_NODShiLtJ_P0029261 Tmem11 protein_coding protein_coding MGP_NODShiLtJ_T0012416.1 MGP_NODShiLtJ_G0010524.1 mouse_genomes_project 11 28247416 28247892 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029037.1 MGP_NODShiLtJ_G0018212.1 mouse_genomes_project 11 63905761 63908041 - MGP_NODShiLtJ_P0029037 protein_coding protein_coding MGP_NODShiLtJ_T0030661.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85161027 85281230 + MGP_NODShiLtJ_P0030661 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030662.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85161072 85236172 + MGP_NODShiLtJ_P0030662 Myo18a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030663.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85161082 85179274 + Myo18a protein_coding retained_intron MGP_NODShiLtJ_T0030664.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85163384 85176485 + MGP_NODShiLtJ_P0030664 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030665.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85164517 85281230 + MGP_NODShiLtJ_P0030665 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030666.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85171284 85281230 + MGP_NODShiLtJ_P0030666 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030667.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85176343 85281230 + MGP_NODShiLtJ_P0030667 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030668.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85176343 85281230 + MGP_NODShiLtJ_P0030668 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030669.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85176371 85280393 + MGP_NODShiLtJ_P0030669 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030670.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85176371 85280392 + MGP_NODShiLtJ_P0030670 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030671.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85176394 85280098 + MGP_NODShiLtJ_P0030671 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030673.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85212716 85281087 + MGP_NODShiLtJ_P0030673 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030674.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85212755 85223906 + MGP_NODShiLtJ_P0030674 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030675.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85212768 85281230 + MGP_NODShiLtJ_P0030675 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030676.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85212768 85280359 + MGP_NODShiLtJ_P0030676 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030677.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85212793 85280087 + MGP_NODShiLtJ_P0030677 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030678.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85212793 85280306 + MGP_NODShiLtJ_P0030678 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030679.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85222851 85281230 + MGP_NODShiLtJ_P0030679 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030680.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85237711 85240799 + Myo18a protein_coding processed_transcript MGP_NODShiLtJ_T0030681.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85251244 85256182 + Myo18a protein_coding processed_transcript MGP_NODShiLtJ_T0030682.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85255546 85259482 + Myo18a protein_coding retained_intron MGP_NODShiLtJ_T0030683.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85264054 85268716 + Myo18a protein_coding retained_intron MGP_NODShiLtJ_T0030684.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85265259 85268587 + Myo18a protein_coding retained_intron MGP_NODShiLtJ_T0030685.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85269125 85274612 + MGP_NODShiLtJ_P0030685 Myo18a protein_coding protein_coding MGP_NODShiLtJ_T0030686.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85272740 85280326 + Myo18a protein_coding retained_intron MGP_NODShiLtJ_T0030687.1 MGP_NODShiLtJ_G0018603.1 mouse_genomes_project 11 85275536 85280445 + Myo18a protein_coding processed_transcript MGP_NODShiLtJ_T0029442.1 MGP_NODShiLtJ_G0018312.1 mouse_genomes_project 11 68566401 68607599 - Zfp286 protein_coding processed_transcript MGP_NODShiLtJ_T0029443.1 MGP_NODShiLtJ_G0018312.1 mouse_genomes_project 11 68597004 68608081 - MGP_NODShiLtJ_P0029443 Zfp286 protein_coding protein_coding MGP_NODShiLtJ_T0029444.1 MGP_NODShiLtJ_G0018312.1 mouse_genomes_project 11 68598222 68608042 - MGP_NODShiLtJ_P0029444 Zfp286 protein_coding protein_coding MGP_NODShiLtJ_T0029445.1 MGP_NODShiLtJ_G0018312.1 mouse_genomes_project 11 68599347 68608036 - Zfp286 protein_coding processed_transcript MGP_NODShiLtJ_T0029446.1 MGP_NODShiLtJ_G0018312.1 mouse_genomes_project 11 68599356 68602773 - Zfp286 protein_coding processed_transcript MGP_NODShiLtJ_T0029447.1 MGP_NODShiLtJ_G0018312.1 mouse_genomes_project 11 68602137 68608028 - Zfp286 protein_coding processed_transcript MGP_NODShiLtJ_T0029448.1 MGP_NODShiLtJ_G0018312.1 mouse_genomes_project 11 68602137 68608005 - Zfp286 protein_coding processed_transcript MGP_NODShiLtJ_T0029449.1 MGP_NODShiLtJ_G0018312.1 mouse_genomes_project 11 68606193 68608042 - Zfp286 protein_coding processed_transcript MGP_NODShiLtJ_T0029033.1 MGP_NODShiLtJ_G0018209.1 mouse_genomes_project 11 63854155 63856933 - MGP_NODShiLtJ_P0029033 protein_coding protein_coding MGP_NODShiLtJ_T0029034.1 MGP_NODShiLtJ_G0018209.1 mouse_genomes_project 11 63854792 63856947 - MGP_NODShiLtJ_P0029034 protein_coding protein_coding MGP_NODShiLtJ_T0006273.1 MGP_NODShiLtJ_G0005227.1 mouse_genomes_project 11 112883429 112889238 - 2810433D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006274.1 MGP_NODShiLtJ_G0005227.1 mouse_genomes_project 11 112885148 112889188 - 2810433D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0032925.1 MGP_NODShiLtJ_G0019174.1 mouse_genomes_project 11 118322003 118358045 + Helz protein_coding processed_transcript MGP_NODShiLtJ_T0032926.1 MGP_NODShiLtJ_G0019174.1 mouse_genomes_project 11 118322029 118467080 + MGP_NODShiLtJ_P0032926 Helz protein_coding protein_coding MGP_NODShiLtJ_T0032927.1 MGP_NODShiLtJ_G0019174.1 mouse_genomes_project 11 118322033 118484563 + MGP_NODShiLtJ_P0032927 Helz protein_coding protein_coding MGP_NODShiLtJ_T0032928.1 MGP_NODShiLtJ_G0019174.1 mouse_genomes_project 11 118322041 118491449 + MGP_NODShiLtJ_P0032928 Helz protein_coding protein_coding MGP_NODShiLtJ_T0032929.1 MGP_NODShiLtJ_G0019174.1 mouse_genomes_project 11 118417391 118467080 + MGP_NODShiLtJ_P0032929 Helz protein_coding protein_coding MGP_NODShiLtJ_T0032930.1 MGP_NODShiLtJ_G0019174.1 mouse_genomes_project 11 118424584 118436169 + Helz protein_coding processed_transcript MGP_NODShiLtJ_T0032931.1 MGP_NODShiLtJ_G0019174.1 mouse_genomes_project 11 118465844 118467796 + Helz protein_coding processed_transcript MGP_NODShiLtJ_T0032932.1 MGP_NODShiLtJ_G0019174.1 mouse_genomes_project 11 118467761 118484133 + Helz protein_coding processed_transcript MGP_NODShiLtJ_T0032048.1 MGP_NODShiLtJ_G0018968.1 mouse_genomes_project 11 109683821 109684955 - MGP_NODShiLtJ_P0032048 Krtap4-8 protein_coding protein_coding MGP_NODShiLtJ_T0027598.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1760016 1849607 - MGP_NODShiLtJ_P0027598 Nf2 protein_coding protein_coding MGP_NODShiLtJ_T0027599.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1760018 1850158 - MGP_NODShiLtJ_P0027599 Nf2 protein_coding protein_coding MGP_NODShiLtJ_T0027600.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1762129 1778797 - Nf2 protein_coding retained_intron MGP_NODShiLtJ_T0027601.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1775625 1831350 - Nf2 protein_coding processed_transcript MGP_NODShiLtJ_T0027602.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1778125 1809729 - MGP_NODShiLtJ_P0027602 Nf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027603.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1784879 1849816 - MGP_NODShiLtJ_P0027603 Nf2 protein_coding protein_coding MGP_NODShiLtJ_T0027604.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1788109 1808804 - Nf2 protein_coding processed_transcript MGP_NODShiLtJ_T0027605.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1788158 1812111 - MGP_NODShiLtJ_P0027605 Nf2 protein_coding protein_coding MGP_NODShiLtJ_T0027606.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1793493 1813941 - MGP_NODShiLtJ_P0027606 Nf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027607.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1812068 1823152 - Nf2 protein_coding processed_transcript MGP_NODShiLtJ_T0027608.1 MGP_NODShiLtJ_G0017846.1 mouse_genomes_project 11 1828056 1849747 - MGP_NODShiLtJ_P0027608 Nf2 protein_coding protein_coding MGP_NODShiLtJ_T0032340.1 MGP_NODShiLtJ_G0019056.1 mouse_genomes_project 11 111575664 111585865 + MGP_NODShiLtJ_P0032340 Ifi35 protein_coding protein_coding MGP_NODShiLtJ_T0032341.1 MGP_NODShiLtJ_G0019056.1 mouse_genomes_project 11 111575701 111585292 + Ifi35 protein_coding retained_intron MGP_NODShiLtJ_T0032342.1 MGP_NODShiLtJ_G0019056.1 mouse_genomes_project 11 111575827 111585631 + MGP_NODShiLtJ_P0032342 Ifi35 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0012395.1 MGP_NODShiLtJ_G0010503.1 mouse_genomes_project 11 20895761 20896298 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029903.1 MGP_NODShiLtJ_G0018419.1 mouse_genomes_project 11 76400829 76406466 - Slc2a4 protein_coding retained_intron MGP_NODShiLtJ_T0029904.1 MGP_NODShiLtJ_G0018419.1 mouse_genomes_project 11 76401659 76406272 - MGP_NODShiLtJ_P0029904 Slc2a4 protein_coding protein_coding MGP_NODShiLtJ_T0029905.1 MGP_NODShiLtJ_G0018419.1 mouse_genomes_project 11 76402082 76406455 - MGP_NODShiLtJ_P0029905 Slc2a4 protein_coding protein_coding MGP_NODShiLtJ_T0029906.1 MGP_NODShiLtJ_G0018419.1 mouse_genomes_project 11 76403559 76406265 - MGP_NODShiLtJ_P0029906 Slc2a4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029907.1 MGP_NODShiLtJ_G0018419.1 mouse_genomes_project 11 76403559 76406438 - MGP_NODShiLtJ_P0029907 Slc2a4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029908.1 MGP_NODShiLtJ_G0018419.1 mouse_genomes_project 11 76403853 76406436 - MGP_NODShiLtJ_P0029908 Slc2a4 protein_coding protein_coding MGP_NODShiLtJ_T0029909.1 MGP_NODShiLtJ_G0018419.1 mouse_genomes_project 11 76404359 76406445 - MGP_NODShiLtJ_P0029909 Slc2a4 protein_coding protein_coding MGP_NODShiLtJ_T0032567.1 MGP_NODShiLtJ_G0019093.1 mouse_genomes_project 11 112865846 112869516 + MGP_NODShiLtJ_P0032567 Fzd2 protein_coding protein_coding MGP_NODShiLtJ_T0028813.1 MGP_NODShiLtJ_G0018150.1 mouse_genomes_project 11 58407948 58423087 + MGP_NODShiLtJ_P0028813 Sept8 protein_coding protein_coding MGP_NODShiLtJ_T0028814.1 MGP_NODShiLtJ_G0018150.1 mouse_genomes_project 11 58408437 58432668 + MGP_NODShiLtJ_P0028814 Sept8 protein_coding protein_coding MGP_NODShiLtJ_T0028815.1 MGP_NODShiLtJ_G0018150.1 mouse_genomes_project 11 58408461 58439332 + MGP_NODShiLtJ_P0028815 Sept8 protein_coding protein_coding MGP_NODShiLtJ_T0028816.1 MGP_NODShiLtJ_G0018150.1 mouse_genomes_project 11 58408491 58432669 + MGP_NODShiLtJ_P0028816 Sept8 protein_coding protein_coding MGP_NODShiLtJ_T0028817.1 MGP_NODShiLtJ_G0018150.1 mouse_genomes_project 11 58408599 58430469 + MGP_NODShiLtJ_P0028817 Sept8 protein_coding protein_coding MGP_NODShiLtJ_T0028818.1 MGP_NODShiLtJ_G0018150.1 mouse_genomes_project 11 58408618 58430418 + MGP_NODShiLtJ_P0028818 Sept8 protein_coding protein_coding MGP_NODShiLtJ_T0028819.1 MGP_NODShiLtJ_G0018150.1 mouse_genomes_project 11 58420744 58425734 + Sept8 protein_coding processed_transcript MGP_NODShiLtJ_T0032102.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110370953 110374712 - Jup protein_coding processed_transcript MGP_NODShiLtJ_T0032103.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110372614 110400476 - MGP_NODShiLtJ_P0032103 Jup protein_coding protein_coding MGP_NODShiLtJ_T0032104.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110373054 110376121 - Jup protein_coding processed_transcript MGP_NODShiLtJ_T0032105.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110374291 110400476 - MGP_NODShiLtJ_P0032105 Jup protein_coding protein_coding MGP_NODShiLtJ_T0032106.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110374352 110375304 - Jup protein_coding processed_transcript MGP_NODShiLtJ_T0032107.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110384039 110385823 - Jup protein_coding processed_transcript MGP_NODShiLtJ_T0032108.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110386045 110400490 - Jup protein_coding processed_transcript MGP_NODShiLtJ_T0032109.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110386125 110389472 - Jup protein_coding processed_transcript MGP_NODShiLtJ_T0032110.1 MGP_NODShiLtJ_G0019005.1 mouse_genomes_project 11 110386134 110389501 - Jup protein_coding processed_transcript MGP_NODShiLtJ_T0030320.1 MGP_NODShiLtJ_G0018506.1 mouse_genomes_project 11 80029632 80062406 + MGP_NODShiLtJ_P0030320 Trpv1 protein_coding protein_coding MGP_NODShiLtJ_T0030321.1 MGP_NODShiLtJ_G0018506.1 mouse_genomes_project 11 80033583 80061674 + MGP_NODShiLtJ_P0030321 Trpv1 protein_coding protein_coding MGP_NODShiLtJ_T0030322.1 MGP_NODShiLtJ_G0018506.1 mouse_genomes_project 11 80033583 80061674 + MGP_NODShiLtJ_P0030322 Trpv1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030323.1 MGP_NODShiLtJ_G0018506.1 mouse_genomes_project 11 80035362 80062409 + MGP_NODShiLtJ_P0030323 Trpv1 protein_coding protein_coding MGP_NODShiLtJ_T0030324.1 MGP_NODShiLtJ_G0018506.1 mouse_genomes_project 11 80035626 80050184 + MGP_NODShiLtJ_P0030324 Trpv1 protein_coding protein_coding MGP_NODShiLtJ_T0030325.1 MGP_NODShiLtJ_G0018506.1 mouse_genomes_project 11 80047670 80049584 + Trpv1 protein_coding processed_transcript MGP_NODShiLtJ_T0006295.1 MGP_NODShiLtJ_G0005244.1 mouse_genomes_project 11 125726864 125728149 + Gm11691 lincRNA lincRNA MGP_NODShiLtJ_T0032705.1 MGP_NODShiLtJ_G0019126.1 mouse_genomes_project 11 114556200 114558425 + MGP_NODShiLtJ_P0032705 Sppl2c protein_coding protein_coding MGP_NODShiLtJ_T0032706.1 MGP_NODShiLtJ_G0019126.1 mouse_genomes_project 11 114556200 114561426 + MGP_NODShiLtJ_P0032706 Sppl2c protein_coding protein_coding MGP_NODShiLtJ_T0030593.1 MGP_NODShiLtJ_G0018587.1 mouse_genomes_project 11 84037389 84104513 - MGP_NODShiLtJ_P0030593 Cpd protein_coding protein_coding MGP_NODShiLtJ_T0030594.1 MGP_NODShiLtJ_G0018587.1 mouse_genomes_project 11 84045823 84050701 - Cpd protein_coding retained_intron MGP_NODShiLtJ_T0030595.1 MGP_NODShiLtJ_G0018587.1 mouse_genomes_project 11 84067432 84070537 - Cpd protein_coding retained_intron MGP_NODShiLtJ_T0031788.1 MGP_NODShiLtJ_G0018885.1 mouse_genomes_project 11 107309893 107334077 + MGP_NODShiLtJ_P0031788 Mllt6 protein_coding protein_coding MGP_NODShiLtJ_T0031789.1 MGP_NODShiLtJ_G0018885.1 mouse_genomes_project 11 107309893 107334077 + MGP_NODShiLtJ_P0031789 Mllt6 protein_coding protein_coding MGP_NODShiLtJ_T0031790.1 MGP_NODShiLtJ_G0018885.1 mouse_genomes_project 11 107309998 107331168 + Mllt6 protein_coding processed_transcript MGP_NODShiLtJ_T0031791.1 MGP_NODShiLtJ_G0018885.1 mouse_genomes_project 11 107311350 107319923 + Mllt6 protein_coding processed_transcript MGP_NODShiLtJ_T0031792.1 MGP_NODShiLtJ_G0018885.1 mouse_genomes_project 11 107322426 107324772 + Mllt6 protein_coding processed_transcript MGP_NODShiLtJ_T0031793.1 MGP_NODShiLtJ_G0018885.1 mouse_genomes_project 11 107322426 107324772 + Mllt6 protein_coding processed_transcript MGP_NODShiLtJ_T0032947.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119261810 119741265 + MGP_NODShiLtJ_P0032947 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032948.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119261884 119741264 + MGP_NODShiLtJ_P0032948 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032949.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119261895 119312151 + Cep112 protein_coding retained_intron MGP_NODShiLtJ_T0032950.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119261909 119278520 + MGP_NODShiLtJ_P0032950 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032951.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119262083 119383243 + MGP_NODShiLtJ_P0032951 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032952.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119262126 119741265 + MGP_NODShiLtJ_P0032952 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032953.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119262234 119740909 + MGP_NODShiLtJ_P0032953 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032954.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119349237 119741000 + MGP_NODShiLtJ_P0032954 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032955.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119383233 119425302 + Cep112 protein_coding retained_intron MGP_NODShiLtJ_T0032956.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119443419 119632032 + MGP_NODShiLtJ_P0032956 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032957.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119462672 119529700 + Cep112 protein_coding processed_transcript MGP_NODShiLtJ_T0032958.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119504039 119740903 + Cep112 protein_coding processed_transcript MGP_NODShiLtJ_T0032959.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119509867 119736524 + Cep112 protein_coding processed_transcript MGP_NODShiLtJ_T0032960.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119553482 119740999 + MGP_NODShiLtJ_P0032960 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032961.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119553489 119741265 + MGP_NODShiLtJ_P0032961 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032962.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119553498 119741004 + MGP_NODShiLtJ_P0032962 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0032964.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119582425 119686349 + Cep112 protein_coding processed_transcript MGP_NODShiLtJ_T0032965.1 MGP_NODShiLtJ_G0019180.1 mouse_genomes_project 11 119626485 119740012 + MGP_NODShiLtJ_P0032965 Cep112 protein_coding protein_coding MGP_NODShiLtJ_T0098737.1 MGP_NODShiLtJ_G0037131.1 mouse_genomes_project 11 127311179 127311286 + Gm25364 snRNA snRNA MGP_NODShiLtJ_T0028323.1 MGP_NODShiLtJ_G0018015.1 mouse_genomes_project 11 37880456 39197995 - MGP_NODShiLtJ_P0028323 Tenm2 protein_coding protein_coding MGP_NODShiLtJ_T0028324.1 MGP_NODShiLtJ_G0018015.1 mouse_genomes_project 11 37881476 38870111 - MGP_NODShiLtJ_P0028324 Tenm2 protein_coding protein_coding MGP_NODShiLtJ_T0028325.1 MGP_NODShiLtJ_G0018015.1 mouse_genomes_project 11 37881849 38870111 - MGP_NODShiLtJ_P0028325 Tenm2 protein_coding protein_coding MGP_NODShiLtJ_T0028326.1 MGP_NODShiLtJ_G0018015.1 mouse_genomes_project 11 38016748 38870111 - Tenm2 protein_coding processed_transcript MGP_NODShiLtJ_T0028327.1 MGP_NODShiLtJ_G0018015.1 mouse_genomes_project 11 38018020 38576963 - Tenm2 protein_coding processed_transcript MGP_NODShiLtJ_T0028328.1 MGP_NODShiLtJ_G0018015.1 mouse_genomes_project 11 38042131 38385780 - Tenm2 protein_coding processed_transcript MGP_NODShiLtJ_T0028329.1 MGP_NODShiLtJ_G0018015.1 mouse_genomes_project 11 38268908 38321146 - Tenm2 protein_coding processed_transcript MGP_NODShiLtJ_T0028330.1 MGP_NODShiLtJ_G0018015.1 mouse_genomes_project 11 38870149 39198077 - Tenm2 protein_coding processed_transcript MGP_NODShiLtJ_T0027932.1 MGP_NODShiLtJ_G0017920.1 mouse_genomes_project 11 19597180 19665177 - MGP_NODShiLtJ_P0027932 Actr2 protein_coding protein_coding MGP_NODShiLtJ_T0027933.1 MGP_NODShiLtJ_G0017920.1 mouse_genomes_project 11 19620480 19665131 - Actr2 protein_coding processed_transcript MGP_NODShiLtJ_T0027934.1 MGP_NODShiLtJ_G0017920.1 mouse_genomes_project 11 19651874 19665173 - Actr2 protein_coding retained_intron MGP_NODShiLtJ_T0003241.1 MGP_NODShiLtJ_G0002988.1 mouse_genomes_project 11 110026054 110059733 + Gm11571 antisense antisense MGP_NODShiLtJ_T0003202.1 MGP_NODShiLtJ_G0002960.1 mouse_genomes_project 11 96052805 96058686 - Gm11505 antisense antisense MGP_NODShiLtJ_T0006278.1 MGP_NODShiLtJ_G0005231.1 mouse_genomes_project 11 118275418 118292489 - C330019F10Rik lincRNA lincRNA MGP_NODShiLtJ_T0029977.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76708667 76712329 + MGP_NODShiLtJ_P0029977 Slc16a11 protein_coding protein_coding MGP_NODShiLtJ_T0029978.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76709825 76712328 + MGP_NODShiLtJ_P0029978 Slc16a11 protein_coding protein_coding MGP_NODShiLtJ_T0029979.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76709914 76710770 + Slc16a11 protein_coding retained_intron MGP_NODShiLtJ_T0029980.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76709995 76712329 + MGP_NODShiLtJ_P0029980 Slc16a11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029981.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76710030 76712330 + MGP_NODShiLtJ_P0029981 Slc16a11 protein_coding protein_coding MGP_NODShiLtJ_T0029982.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76710034 76712333 + MGP_NODShiLtJ_P0029982 Slc16a11 protein_coding protein_coding MGP_NODShiLtJ_T0029983.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76710034 76711448 + MGP_NODShiLtJ_P0029983 Slc16a11 protein_coding protein_coding MGP_NODShiLtJ_T0029984.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76710036 76710903 + MGP_NODShiLtJ_P0029984 Slc16a11 protein_coding protein_coding MGP_NODShiLtJ_T0029985.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76710037 76711591 + Slc16a11 protein_coding processed_transcript MGP_NODShiLtJ_T0029986.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76710477 76711396 + Slc16a11 protein_coding retained_intron MGP_NODShiLtJ_T0029987.1 MGP_NODShiLtJ_G0018432.1 mouse_genomes_project 11 76710733 76712329 + Slc16a11 protein_coding retained_intron MGP_NODShiLtJ_T0101541.1 MGP_NODShiLtJ_G0039711.1 mouse_genomes_project 11 50643324 50643597 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0030052.1 MGP_NODShiLtJ_G0018450.1 mouse_genomes_project 11 77087503 77088624 + MGP_NODShiLtJ_P0030052 Pld2 protein_coding protein_coding MGP_NODShiLtJ_T0030053.1 MGP_NODShiLtJ_G0018450.1 mouse_genomes_project 11 77087745 77108210 + MGP_NODShiLtJ_P0030053 Pld2 protein_coding protein_coding MGP_NODShiLtJ_T0030054.1 MGP_NODShiLtJ_G0018450.1 mouse_genomes_project 11 77087782 77108210 + MGP_NODShiLtJ_P0030054 Pld2 protein_coding protein_coding MGP_NODShiLtJ_T0030055.1 MGP_NODShiLtJ_G0018450.1 mouse_genomes_project 11 77087795 77093833 + MGP_NODShiLtJ_P0030055 Pld2 protein_coding protein_coding MGP_NODShiLtJ_T0030056.1 MGP_NODShiLtJ_G0018450.1 mouse_genomes_project 11 77103120 77107203 + Pld2 protein_coding retained_intron MGP_NODShiLtJ_T0030057.1 MGP_NODShiLtJ_G0018450.1 mouse_genomes_project 11 77105741 77107327 + MGP_NODShiLtJ_P0030057 Pld2 protein_coding protein_coding MGP_NODShiLtJ_T0030058.1 MGP_NODShiLtJ_G0018450.1 mouse_genomes_project 11 77105906 77107577 + Pld2 protein_coding retained_intron MGP_NODShiLtJ_T0003270.1 MGP_NODShiLtJ_G0003015.1 mouse_genomes_project 11 117870937 117886855 + antisense antisense MGP_NODShiLtJ_T0031538.1 MGP_NODShiLtJ_G0018819.1 mouse_genomes_project 11 104081213 104087023 - MGP_NODShiLtJ_P0031538 Tmem92 protein_coding protein_coding MGP_NODShiLtJ_T0031539.1 MGP_NODShiLtJ_G0018819.1 mouse_genomes_project 11 104081760 104086820 - MGP_NODShiLtJ_P0031539 Tmem92 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031540.1 MGP_NODShiLtJ_G0018819.1 mouse_genomes_project 11 104081760 104086820 - MGP_NODShiLtJ_P0031540 Tmem92 protein_coding protein_coding MGP_NODShiLtJ_T0029750.1 MGP_NODShiLtJ_G0018386.1 mouse_genomes_project 11 75977242 75988352 + Trp53 protein_coding processed_transcript MGP_NODShiLtJ_T0029751.1 MGP_NODShiLtJ_G0018386.1 mouse_genomes_project 11 75983717 75989278 + MGP_NODShiLtJ_P0029751 Trp53 protein_coding protein_coding MGP_NODShiLtJ_T0029752.1 MGP_NODShiLtJ_G0018386.1 mouse_genomes_project 11 75983717 75989726 + MGP_NODShiLtJ_P0029752 Trp53 protein_coding protein_coding MGP_NODShiLtJ_T0029753.1 MGP_NODShiLtJ_G0018386.1 mouse_genomes_project 11 75985773 75986900 + Trp53 protein_coding processed_transcript MGP_NODShiLtJ_T0031251.1 MGP_NODShiLtJ_G0018751.1 mouse_genomes_project 11 95415214 95551873 - MGP_NODShiLtJ_P0031251 Ppm1e protein_coding protein_coding MGP_NODShiLtJ_T0031252.1 MGP_NODShiLtJ_G0018751.1 mouse_genomes_project 11 95431365 95551487 - Ppm1e protein_coding processed_transcript MGP_NODShiLtJ_T0030958.1 MGP_NODShiLtJ_G0018673.1 mouse_genomes_project 11 89796564 89798120 + MGP_NODShiLtJ_P0030958 Ccl12 protein_coding protein_coding MGP_NODShiLtJ_T0030959.1 MGP_NODShiLtJ_G0018673.1 mouse_genomes_project 11 89796571 89798087 + Ccl12 protein_coding processed_transcript MGP_NODShiLtJ_T0009622.1 MGP_NODShiLtJ_G0007755.1 mouse_genomes_project 11 82458055 82458170 - miRNA miRNA MGP_NODShiLtJ_T0029740.1 MGP_NODShiLtJ_G0018383.1 mouse_genomes_project 11 75802159 75936759 - MGP_NODShiLtJ_P0029740 Dnah2 protein_coding protein_coding MGP_NODShiLtJ_T0029741.1 MGP_NODShiLtJ_G0018383.1 mouse_genomes_project 11 75802159 75942183 - MGP_NODShiLtJ_P0029741 Dnah2 protein_coding protein_coding MGP_NODShiLtJ_T0029742.1 MGP_NODShiLtJ_G0018383.1 mouse_genomes_project 11 75802343 75939614 - MGP_NODShiLtJ_P0029742 Dnah2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029743.1 MGP_NODShiLtJ_G0018383.1 mouse_genomes_project 11 75850010 75851095 - Dnah2 protein_coding processed_transcript MGP_NODShiLtJ_T0029744.1 MGP_NODShiLtJ_G0018383.1 mouse_genomes_project 11 75899202 75942185 - Dnah2 protein_coding processed_transcript MGP_NODShiLtJ_T0029745.1 MGP_NODShiLtJ_G0018383.1 mouse_genomes_project 11 75904543 75905292 - Dnah2 protein_coding processed_transcript MGP_NODShiLtJ_T0017112.1 MGP_NODShiLtJ_G0015066.1 mouse_genomes_project 11 105325469 105327643 + 4833417C18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0003159.1 MGP_NODShiLtJ_G0002926.1 mouse_genomes_project 11 73427896 73432895 - antisense antisense MGP_NODShiLtJ_T0003160.1 MGP_NODShiLtJ_G0002926.1 mouse_genomes_project 11 73428213 73442107 - antisense antisense MGP_NODShiLtJ_T0028685.1 MGP_NODShiLtJ_G0018116.1 mouse_genomes_project 11 55868004 55877303 - MGP_NODShiLtJ_P0028685 BC049762 protein_coding protein_coding MGP_NODShiLtJ_T0028686.1 MGP_NODShiLtJ_G0018116.1 mouse_genomes_project 11 55868004 55877398 - MGP_NODShiLtJ_P0028686 BC049762 protein_coding protein_coding MGP_NODShiLtJ_T0003086.1 MGP_NODShiLtJ_G0002861.1 mouse_genomes_project 11 29523173 29527240 + Gm12081 antisense antisense MGP_NODShiLtJ_T0003197.1 MGP_NODShiLtJ_G0002957.1 mouse_genomes_project 11 93862171 93871459 - Bcas3os2 antisense antisense MGP_NODShiLtJ_T0006159.1 MGP_NODShiLtJ_G0005140.1 mouse_genomes_project 11 43499983 43500943 - 3110004A20Rik lincRNA lincRNA MGP_NODShiLtJ_T0033217.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127155036 127169161 + MGP_NODShiLtJ_P0033217 Slc16a5 protein_coding protein_coding MGP_NODShiLtJ_T0033218.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127155068 127163314 + MGP_NODShiLtJ_P0033218 Slc16a5 protein_coding protein_coding MGP_NODShiLtJ_T0033219.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127155126 127163419 + Slc16a5 protein_coding processed_transcript MGP_NODShiLtJ_T0033220.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127155171 127169133 + MGP_NODShiLtJ_P0033220 Slc16a5 protein_coding protein_coding MGP_NODShiLtJ_T0033221.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127156362 127169161 + Slc16a5 protein_coding processed_transcript MGP_NODShiLtJ_T0033222.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127156377 127157549 + Slc16a5 protein_coding processed_transcript MGP_NODShiLtJ_T0033223.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127156380 127163419 + Slc16a5 protein_coding processed_transcript MGP_NODShiLtJ_T0033224.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127156386 127163363 + Slc16a5 protein_coding processed_transcript MGP_NODShiLtJ_T0033225.1 MGP_NODShiLtJ_G0019245.1 mouse_genomes_project 11 127157100 127168369 + Slc16a5 protein_coding retained_intron MGP_NODShiLtJ_T0028097.1 MGP_NODShiLtJ_G0017956.1 mouse_genomes_project 11 27101376 27101980 + MGP_NODShiLtJ_P0028097 Gm6899 protein_coding protein_coding MGP_NODShiLtJ_T0101550.1 MGP_NODShiLtJ_G0039720.1 mouse_genomes_project 11 80306888 80306973 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011188.1 MGP_NODShiLtJ_G0009321.1 mouse_genomes_project 11 55048008 55048284 - Gm23824 misc_RNA misc_RNA MGP_NODShiLtJ_T0003112.1 MGP_NODShiLtJ_G0002887.1 mouse_genomes_project 11 58620387 58621053 - Gm12214 antisense antisense MGP_NODShiLtJ_T0012428.1 MGP_NODShiLtJ_G0010536.1 mouse_genomes_project 11 32110795 32112454 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029968.1 MGP_NODShiLtJ_G0018429.1 mouse_genomes_project 11 76569649 76582831 + MGP_NODShiLtJ_P0029968 Asgr2 protein_coding protein_coding MGP_NODShiLtJ_T0029969.1 MGP_NODShiLtJ_G0018429.1 mouse_genomes_project 11 76569733 76582361 + MGP_NODShiLtJ_P0029969 Asgr2 protein_coding protein_coding MGP_NODShiLtJ_T0029970.1 MGP_NODShiLtJ_G0018429.1 mouse_genomes_project 11 76574677 76582806 + Asgr2 protein_coding retained_intron MGP_NODShiLtJ_T0032791.1 MGP_NODShiLtJ_G0019143.1 mouse_genomes_project 11 116617558 116640086 + MGP_NODShiLtJ_P0032791 Kcnh6 protein_coding protein_coding MGP_NODShiLtJ_T0032792.1 MGP_NODShiLtJ_G0019143.1 mouse_genomes_project 11 116617607 116640528 + MGP_NODShiLtJ_P0032792 Kcnh6 protein_coding protein_coding MGP_NODShiLtJ_T0032793.1 MGP_NODShiLtJ_G0019143.1 mouse_genomes_project 11 116617637 116640043 + MGP_NODShiLtJ_P0032793 Kcnh6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032794.1 MGP_NODShiLtJ_G0019143.1 mouse_genomes_project 11 116623207 116626907 + Kcnh6 protein_coding processed_transcript MGP_NODShiLtJ_T0006129.1 MGP_NODShiLtJ_G0005116.1 mouse_genomes_project 11 24414034 24418611 - Gm12065 lincRNA lincRNA MGP_NODShiLtJ_T0029995.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732359 76734963 - MGP_NODShiLtJ_P0029995 0610010K14Rik protein_coding protein_coding MGP_NODShiLtJ_T0029997.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732367 76735073 - MGP_NODShiLtJ_P0029997 0610010K14Rik protein_coding protein_coding MGP_NODShiLtJ_T0029998.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732367 76735012 - MGP_NODShiLtJ_P0029998 0610010K14Rik protein_coding protein_coding MGP_NODShiLtJ_T0029999.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732367 76733358 - MGP_NODShiLtJ_P0029999 0610010K14Rik protein_coding protein_coding MGP_NODShiLtJ_T0030000.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732367 76735063 - MGP_NODShiLtJ_P0030000 0610010K14Rik protein_coding protein_coding MGP_NODShiLtJ_T0030002.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732523 76734837 - MGP_NODShiLtJ_P0030002 0610010K14Rik protein_coding protein_coding MGP_NODShiLtJ_T0030003.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732532 76734648 - 0610010K14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0030004.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732540 76734922 - 0610010K14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0030005.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76732897 76735020 - MGP_NODShiLtJ_P0030005 0610010K14Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030006.1 MGP_NODShiLtJ_G0018435.1 mouse_genomes_project 11 76733612 76735071 - 0610010K14Rik protein_coding retained_intron MGP_NODShiLtJ_T0032027.1 MGP_NODShiLtJ_G0018947.1 mouse_genomes_project 11 109419549 109420281 - MGP_NODShiLtJ_P0032027 Krtap3-2 protein_coding protein_coding MGP_NODShiLtJ_T0032328.1 MGP_NODShiLtJ_G0019053.1 mouse_genomes_project 11 111544363 111550881 - MGP_NODShiLtJ_P0032328 Ptges3l protein_coding protein_coding MGP_NODShiLtJ_T0032329.1 MGP_NODShiLtJ_G0019053.1 mouse_genomes_project 11 111544363 111550217 - MGP_NODShiLtJ_P0032329 Ptges3l protein_coding protein_coding MGP_NODShiLtJ_T0032330.1 MGP_NODShiLtJ_G0019053.1 mouse_genomes_project 11 111546422 111550217 - MGP_NODShiLtJ_P0032330 Ptges3l protein_coding protein_coding MGP_NODShiLtJ_T0032331.1 MGP_NODShiLtJ_G0019053.1 mouse_genomes_project 11 111546969 111549404 - MGP_NODShiLtJ_P0032331 Ptges3l protein_coding protein_coding MGP_NODShiLtJ_T0032332.1 MGP_NODShiLtJ_G0019053.1 mouse_genomes_project 11 111547379 111549780 - Ptges3l protein_coding retained_intron MGP_NODShiLtJ_T0017067.1 MGP_NODShiLtJ_G0015043.1 mouse_genomes_project 11 64423175 64436542 - 2310058D17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0033003.1 MGP_NODShiLtJ_G0019191.1 mouse_genomes_project 11 120607003 120611518 + Prkar1a protein_coding processed_transcript MGP_NODShiLtJ_T0033004.1 MGP_NODShiLtJ_G0019191.1 mouse_genomes_project 11 120607003 120629612 + MGP_NODShiLtJ_P0033004 Prkar1a protein_coding protein_coding MGP_NODShiLtJ_T0033005.1 MGP_NODShiLtJ_G0019191.1 mouse_genomes_project 11 120608173 120621716 + MGP_NODShiLtJ_P0033005 Prkar1a protein_coding protein_coding MGP_NODShiLtJ_T0033006.1 MGP_NODShiLtJ_G0019191.1 mouse_genomes_project 11 120608477 120629612 + MGP_NODShiLtJ_P0033006 Prkar1a protein_coding protein_coding MGP_NODShiLtJ_T0033007.1 MGP_NODShiLtJ_G0019191.1 mouse_genomes_project 11 120625899 120626932 + Prkar1a protein_coding processed_transcript MGP_NODShiLtJ_T0012558.1 MGP_NODShiLtJ_G0010666.1 mouse_genomes_project 11 85140796 85142100 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032412.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112208151 112241260 - Mpp3 protein_coding processed_transcript MGP_NODShiLtJ_T0032413.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112208151 112239310 - MGP_NODShiLtJ_P0032413 Mpp3 protein_coding protein_coding MGP_NODShiLtJ_T0032414.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112208151 112242739 - MGP_NODShiLtJ_P0032414 Mpp3 protein_coding protein_coding MGP_NODShiLtJ_T0032415.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112208151 112241281 - MGP_NODShiLtJ_P0032415 Mpp3 protein_coding protein_coding MGP_NODShiLtJ_T0032416.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112218426 112220208 - Mpp3 protein_coding retained_intron MGP_NODShiLtJ_T0032417.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112228658 112241263 - MGP_NODShiLtJ_P0032417 Mpp3 protein_coding protein_coding MGP_NODShiLtJ_T0032418.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112233361 112241260 - Mpp3 protein_coding processed_transcript MGP_NODShiLtJ_T0032419.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112236655 112239073 - Mpp3 protein_coding processed_transcript MGP_NODShiLtJ_T0032420.1 MGP_NODShiLtJ_G0019070.1 mouse_genomes_project 11 112238602 112241081 - Mpp3 protein_coding processed_transcript MGP_NODShiLtJ_T0033336.1 MGP_NODShiLtJ_G0019262.1 mouse_genomes_project 11 127639605 127646885 + MGP_NODShiLtJ_P0033336 Smim5 protein_coding protein_coding MGP_NODShiLtJ_T0033337.1 MGP_NODShiLtJ_G0019262.1 mouse_genomes_project 11 127639818 127646513 + MGP_NODShiLtJ_P0033337 Smim5 protein_coding protein_coding MGP_NODShiLtJ_T0033338.1 MGP_NODShiLtJ_G0019262.1 mouse_genomes_project 11 127639842 127646326 + MGP_NODShiLtJ_P0033338 Smim5 protein_coding protein_coding MGP_NODShiLtJ_T0033645.1 MGP_NODShiLtJ_G0019324.1 mouse_genomes_project 11 130397561 130410484 - MGP_NODShiLtJ_P0033645 Cant1 protein_coding protein_coding MGP_NODShiLtJ_T0033646.1 MGP_NODShiLtJ_G0019324.1 mouse_genomes_project 11 130397561 130410450 - MGP_NODShiLtJ_P0033646 Cant1 protein_coding protein_coding MGP_NODShiLtJ_T0033647.1 MGP_NODShiLtJ_G0019324.1 mouse_genomes_project 11 130397562 130410421 - MGP_NODShiLtJ_P0033647 Cant1 protein_coding protein_coding MGP_NODShiLtJ_T0033648.1 MGP_NODShiLtJ_G0019324.1 mouse_genomes_project 11 130398915 130410450 - MGP_NODShiLtJ_P0033648 Cant1 protein_coding protein_coding MGP_NODShiLtJ_T0033649.1 MGP_NODShiLtJ_G0019324.1 mouse_genomes_project 11 130398915 130407073 - MGP_NODShiLtJ_P0033649 Cant1 protein_coding protein_coding MGP_NODShiLtJ_T0033650.1 MGP_NODShiLtJ_G0019324.1 mouse_genomes_project 11 130398915 130410421 - MGP_NODShiLtJ_P0033650 Cant1 protein_coding protein_coding MGP_NODShiLtJ_T0032228.1 MGP_NODShiLtJ_G0019031.1 mouse_genomes_project 11 111140897 111144937 + MGP_NODShiLtJ_P0032228 Coasy protein_coding protein_coding MGP_NODShiLtJ_T0032229.1 MGP_NODShiLtJ_G0019031.1 mouse_genomes_project 11 111140950 111143938 + Coasy protein_coding processed_transcript MGP_NODShiLtJ_T0032230.1 MGP_NODShiLtJ_G0019031.1 mouse_genomes_project 11 111140957 111144937 + MGP_NODShiLtJ_P0032230 Coasy protein_coding protein_coding MGP_NODShiLtJ_T0032231.1 MGP_NODShiLtJ_G0019031.1 mouse_genomes_project 11 111142227 111143512 + Coasy protein_coding processed_transcript MGP_NODShiLtJ_T0031749.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106814601 106902438 - MGP_NODShiLtJ_P0031749 Npepps protein_coding protein_coding MGP_NODShiLtJ_T0031750.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106814601 106902438 - MGP_NODShiLtJ_P0031750 Npepps protein_coding protein_coding MGP_NODShiLtJ_T0031751.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106814603 106902438 - MGP_NODShiLtJ_P0031751 Npepps protein_coding protein_coding MGP_NODShiLtJ_T0031752.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106815666 106821223 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031753.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106815691 106856801 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031754.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106815691 106902398 - MGP_NODShiLtJ_P0031754 Npepps protein_coding protein_coding MGP_NODShiLtJ_T0031755.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106815916 106822055 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031756.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106822296 106835579 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031757.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106833920 106846214 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031758.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106835208 106839424 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031759.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106842253 106849990 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031760.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106844576 106856813 - Npepps protein_coding processed_transcript MGP_NODShiLtJ_T0031761.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106844581 106858385 - MGP_NODShiLtJ_P0031761 Npepps protein_coding protein_coding MGP_NODShiLtJ_T0031762.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106849962 106886749 - MGP_NODShiLtJ_P0031762 Npepps protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031763.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106856895 106858748 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031764.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106858235 106902374 - MGP_NODShiLtJ_P0031764 Npepps protein_coding protein_coding MGP_NODShiLtJ_T0031765.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106860023 106902436 - MGP_NODShiLtJ_P0031765 Npepps protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031766.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106876384 106902438 - Npepps protein_coding retained_intron MGP_NODShiLtJ_T0031767.1 MGP_NODShiLtJ_G0018877.1 mouse_genomes_project 11 106877055 106886741 - MGP_NODShiLtJ_P0031767 Npepps protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029754.1 MGP_NODShiLtJ_G0018387.1 mouse_genomes_project 11 75997429 76003523 - MGP_NODShiLtJ_P0029754 Atp1b2 protein_coding protein_coding MGP_NODShiLtJ_T0029755.1 MGP_NODShiLtJ_G0018387.1 mouse_genomes_project 11 75997434 76003636 - Atp1b2 protein_coding processed_transcript MGP_NODShiLtJ_T0029756.1 MGP_NODShiLtJ_G0018387.1 mouse_genomes_project 11 75998359 76000435 - MGP_NODShiLtJ_P0029756 Atp1b2 protein_coding protein_coding MGP_NODShiLtJ_T0029757.1 MGP_NODShiLtJ_G0018387.1 mouse_genomes_project 11 75999051 76001307 - Atp1b2 protein_coding processed_transcript MGP_NODShiLtJ_T0029758.1 MGP_NODShiLtJ_G0018387.1 mouse_genomes_project 11 75999837 76000856 - Atp1b2 protein_coding processed_transcript MGP_NODShiLtJ_T0032320.1 MGP_NODShiLtJ_G0019050.1 mouse_genomes_project 11 111479385 111491813 + MGP_NODShiLtJ_P0032320 G6pc protein_coding protein_coding MGP_NODShiLtJ_T0030340.1 MGP_NODShiLtJ_G0018513.1 mouse_genomes_project 11 80238076 80246855 - MGP_NODShiLtJ_P0030340 Olfr378 protein_coding protein_coding MGP_NODShiLtJ_T0027987.1 MGP_NODShiLtJ_G0017933.1 mouse_genomes_project 11 21849662 22196665 - MGP_NODShiLtJ_P0027987 Ehbp1 protein_coding protein_coding MGP_NODShiLtJ_T0027988.1 MGP_NODShiLtJ_G0017933.1 mouse_genomes_project 11 21849662 22195708 - MGP_NODShiLtJ_P0027988 Ehbp1 protein_coding protein_coding MGP_NODShiLtJ_T0027989.1 MGP_NODShiLtJ_G0017933.1 mouse_genomes_project 11 21849664 22196665 - MGP_NODShiLtJ_P0027989 Ehbp1 protein_coding protein_coding MGP_NODShiLtJ_T0027990.1 MGP_NODShiLtJ_G0017933.1 mouse_genomes_project 11 21961435 22028189 - Ehbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0027991.1 MGP_NODShiLtJ_G0017933.1 mouse_genomes_project 11 22001055 22195742 - MGP_NODShiLtJ_P0027991 Ehbp1 protein_coding protein_coding MGP_NODShiLtJ_T0027992.1 MGP_NODShiLtJ_G0017933.1 mouse_genomes_project 11 22024219 22026593 - Ehbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0027993.1 MGP_NODShiLtJ_G0017933.1 mouse_genomes_project 11 22121367 22278298 - Ehbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0006119.1 MGP_NODShiLtJ_G0005106.1 mouse_genomes_project 11 19702320 19703099 - Gm12031 lincRNA lincRNA MGP_NODShiLtJ_T0033452.1 MGP_NODShiLtJ_G0019284.1 mouse_genomes_project 11 128201963 128207956 + MGP_NODShiLtJ_P0033452 protein_coding protein_coding MGP_NODShiLtJ_T0031379.1 MGP_NODShiLtJ_G0018783.1 mouse_genomes_project 11 97860374 97891542 - MGP_NODShiLtJ_P0031379 protein_coding protein_coding MGP_NODShiLtJ_T0029355.1 MGP_NODShiLtJ_G0018297.1 mouse_genomes_project 11 67415981 67451570 - MGP_NODShiLtJ_P0029355 Prpsap2 protein_coding protein_coding MGP_NODShiLtJ_T0029356.1 MGP_NODShiLtJ_G0018297.1 mouse_genomes_project 11 67415985 67451494 - Prpsap2 protein_coding processed_transcript MGP_NODShiLtJ_T0029357.1 MGP_NODShiLtJ_G0018297.1 mouse_genomes_project 11 67415985 67451544 - MGP_NODShiLtJ_P0029357 Prpsap2 protein_coding protein_coding MGP_NODShiLtJ_T0029358.1 MGP_NODShiLtJ_G0018297.1 mouse_genomes_project 11 67444143 67451522 - Prpsap2 protein_coding processed_transcript MGP_NODShiLtJ_T0009591.1 MGP_NODShiLtJ_G0007724.1 mouse_genomes_project 11 60572840 60572896 + Mir7652 miRNA miRNA MGP_NODShiLtJ_T0003228.1 MGP_NODShiLtJ_G0002980.1 mouse_genomes_project 11 106902093 106904667 + Gm11592 antisense antisense MGP_NODShiLtJ_T0029868.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76357501 76359829 + Neurl4 protein_coding processed_transcript MGP_NODShiLtJ_T0029869.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76358245 76369945 + MGP_NODShiLtJ_P0029869 Neurl4 protein_coding protein_coding MGP_NODShiLtJ_T0029870.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76358245 76369945 + MGP_NODShiLtJ_P0029870 Neurl4 protein_coding protein_coding MGP_NODShiLtJ_T0029871.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76358245 76369945 + MGP_NODShiLtJ_P0029871 Neurl4 protein_coding protein_coding MGP_NODShiLtJ_T0029872.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76358320 76370250 + MGP_NODShiLtJ_P0029872 Neurl4 protein_coding protein_coding MGP_NODShiLtJ_T0029873.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76358456 76362027 + Neurl4 protein_coding retained_intron MGP_NODShiLtJ_T0029874.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76358585 76360344 + Neurl4 protein_coding processed_transcript MGP_NODShiLtJ_T0029875.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76359821 76369761 + MGP_NODShiLtJ_P0029875 Neurl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029876.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76360464 76365165 + MGP_NODShiLtJ_P0029876 Neurl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029877.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76363693 76364951 + Neurl4 protein_coding retained_intron MGP_NODShiLtJ_T0029878.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76365064 76366754 + Neurl4 protein_coding retained_intron MGP_NODShiLtJ_T0029879.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76365405 76367295 + Neurl4 protein_coding retained_intron MGP_NODShiLtJ_T0029880.1 MGP_NODShiLtJ_G0018415.1 mouse_genomes_project 11 76367465 76369582 + MGP_NODShiLtJ_P0029880 Neurl4 protein_coding protein_coding MGP_NODShiLtJ_T0012479.1 MGP_NODShiLtJ_G0010587.1 mouse_genomes_project 11 57237519 57238103 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032075.1 MGP_NODShiLtJ_G0018993.1 mouse_genomes_project 11 110077195 110080815 - MGP_NODShiLtJ_P0032075 Krt36 protein_coding protein_coding MGP_NODShiLtJ_T0032165.1 MGP_NODShiLtJ_G0019017.1 mouse_genomes_project 11 110712717 110722226 - MGP_NODShiLtJ_P0032165 Dhx58 protein_coding protein_coding MGP_NODShiLtJ_T0032166.1 MGP_NODShiLtJ_G0019017.1 mouse_genomes_project 11 110712896 110714454 - Dhx58 protein_coding processed_transcript MGP_NODShiLtJ_T0032167.1 MGP_NODShiLtJ_G0019017.1 mouse_genomes_project 11 110713086 110717190 - Dhx58 protein_coding processed_transcript MGP_NODShiLtJ_T0032168.1 MGP_NODShiLtJ_G0019017.1 mouse_genomes_project 11 110719346 110722208 - Dhx58 protein_coding processed_transcript MGP_NODShiLtJ_T0032169.1 MGP_NODShiLtJ_G0019017.1 mouse_genomes_project 11 110720102 110721302 - Dhx58 protein_coding processed_transcript MGP_NODShiLtJ_T0032170.1 MGP_NODShiLtJ_G0019017.1 mouse_genomes_project 11 110720714 110722226 - Dhx58 protein_coding processed_transcript MGP_NODShiLtJ_T0000820.1 MGP_NODShiLtJ_G0000750.1 mouse_genomes_project 11 17822253 17822849 + TEC TEC MGP_NODShiLtJ_T0033621.1 MGP_NODShiLtJ_G0019318.1 mouse_genomes_project 11 129971110 130085944 - MGP_NODShiLtJ_P0033621 Dnah17 protein_coding protein_coding MGP_NODShiLtJ_T0033622.1 MGP_NODShiLtJ_G0019318.1 mouse_genomes_project 11 129971110 130085944 - MGP_NODShiLtJ_P0033622 Dnah17 protein_coding protein_coding MGP_NODShiLtJ_T0033623.1 MGP_NODShiLtJ_G0019318.1 mouse_genomes_project 11 129972450 130060020 - MGP_NODShiLtJ_P0033623 Dnah17 protein_coding protein_coding MGP_NODShiLtJ_T0033624.1 MGP_NODShiLtJ_G0019318.1 mouse_genomes_project 11 130041710 130048070 - MGP_NODShiLtJ_P0033624 Dnah17 protein_coding protein_coding MGP_NODShiLtJ_T0033625.1 MGP_NODShiLtJ_G0019318.1 mouse_genomes_project 11 130068946 130082415 - MGP_NODShiLtJ_P0033625 Dnah17 protein_coding protein_coding MGP_NODShiLtJ_T0030333.1 MGP_NODShiLtJ_G0018509.1 mouse_genomes_project 11 80132689 80153753 + MGP_NODShiLtJ_P0030333 Spata22 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012468.1 MGP_NODShiLtJ_G0010576.1 mouse_genomes_project 11 53425673 53425983 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033871.1 MGP_NODShiLtJ_G0019368.1 mouse_genomes_project 11 132711043 132714577 - MGP_NODShiLtJ_P0033871 Arhgdia protein_coding protein_coding MGP_NODShiLtJ_T0033872.1 MGP_NODShiLtJ_G0019368.1 mouse_genomes_project 11 132711048 132714320 - MGP_NODShiLtJ_P0033872 Arhgdia protein_coding protein_coding MGP_NODShiLtJ_T0006236.1 MGP_NODShiLtJ_G0005201.1 mouse_genomes_project 11 92694084 92697531 - 1700109G15Rik lincRNA lincRNA MGP_NODShiLtJ_T0032973.1 MGP_NODShiLtJ_G0019183.1 mouse_genomes_project 11 120038549 120043640 - MGP_NODShiLtJ_P0032973 E030025P04Rik protein_coding protein_coding MGP_NODShiLtJ_T0003141.1 MGP_NODShiLtJ_G0002911.1 mouse_genomes_project 11 68321803 68324187 + antisense antisense MGP_NODShiLtJ_T0000828.1 MGP_NODShiLtJ_G0000758.1 mouse_genomes_project 11 49158864 49183068 - TEC TEC MGP_NODShiLtJ_T0101544.1 MGP_NODShiLtJ_G0039714.1 mouse_genomes_project 11 58852091 58852263 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006209.1 MGP_NODShiLtJ_G0005184.1 mouse_genomes_project 11 78436700 78437770 - Gm12326 lincRNA lincRNA MGP_NODShiLtJ_T0006210.1 MGP_NODShiLtJ_G0005184.1 mouse_genomes_project 11 78437314 78437751 - Gm12326 lincRNA lincRNA MGP_NODShiLtJ_T0098719.1 MGP_NODShiLtJ_G0037113.1 mouse_genomes_project 11 105401417 105401542 + Gm24725 snRNA snRNA MGP_NODShiLtJ_T0030596.1 MGP_NODShiLtJ_G0018588.1 mouse_genomes_project 11 84157252 84175488 + MGP_NODShiLtJ_P0030596 Tmigd1 protein_coding protein_coding MGP_NODShiLtJ_T0030597.1 MGP_NODShiLtJ_G0018588.1 mouse_genomes_project 11 84159568 84169023 + MGP_NODShiLtJ_P0030597 Tmigd1 protein_coding protein_coding MGP_NODShiLtJ_T0030598.1 MGP_NODShiLtJ_G0018588.1 mouse_genomes_project 11 84159638 84175487 + MGP_NODShiLtJ_P0030598 Tmigd1 protein_coding protein_coding MGP_NODShiLtJ_T0030599.1 MGP_NODShiLtJ_G0018588.1 mouse_genomes_project 11 84159655 84174998 + Tmigd1 protein_coding processed_transcript MGP_NODShiLtJ_T0033339.1 MGP_NODShiLtJ_G0019263.1 mouse_genomes_project 11 127654310 127657116 + MGP_NODShiLtJ_P0033339 Smim6 protein_coding protein_coding MGP_NODShiLtJ_T0027909.1 MGP_NODShiLtJ_G0017913.1 mouse_genomes_project 11 16430966 16474215 + MGP_NODShiLtJ_P0027909 Ppp3r1 protein_coding protein_coding MGP_NODShiLtJ_T0027911.1 MGP_NODShiLtJ_G0017913.1 mouse_genomes_project 11 16465484 16467748 + Ppp3r1 protein_coding processed_transcript MGP_NODShiLtJ_T0030189.1 MGP_NODShiLtJ_G0018471.1 mouse_genomes_project 11 77626573 77632141 + MGP_NODShiLtJ_P0030189 Mis12 protein_coding protein_coding MGP_NODShiLtJ_T0030190.1 MGP_NODShiLtJ_G0018471.1 mouse_genomes_project 11 77626573 77634334 + MGP_NODShiLtJ_P0030190 Mis12 protein_coding protein_coding MGP_NODShiLtJ_T0030191.1 MGP_NODShiLtJ_G0018471.1 mouse_genomes_project 11 77626573 77633029 + MGP_NODShiLtJ_P0030191 Mis12 protein_coding protein_coding MGP_NODShiLtJ_T0030192.1 MGP_NODShiLtJ_G0018471.1 mouse_genomes_project 11 77626821 77632130 + MGP_NODShiLtJ_P0030192 Mis12 protein_coding protein_coding MGP_NODShiLtJ_T0030193.1 MGP_NODShiLtJ_G0018471.1 mouse_genomes_project 11 77626824 77632121 + MGP_NODShiLtJ_P0030193 Mis12 protein_coding protein_coding MGP_NODShiLtJ_T0030194.1 MGP_NODShiLtJ_G0018471.1 mouse_genomes_project 11 77626853 77632158 + MGP_NODShiLtJ_P0030194 Mis12 protein_coding protein_coding MGP_NODShiLtJ_T0006309.1 MGP_NODShiLtJ_G0005254.1 mouse_genomes_project 11 130794102 130796559 + Gm11750 lincRNA lincRNA MGP_NODShiLtJ_T0006319.1 MGP_NODShiLtJ_G0005264.1 mouse_genomes_project 11 134032158 134039388 + Gm12589 lincRNA lincRNA MGP_NODShiLtJ_T0017028.1 MGP_NODShiLtJ_G0015021.1 mouse_genomes_project 11 3734330 3737259 - Snhg15 processed_transcript processed_transcript MGP_NODShiLtJ_T0017029.1 MGP_NODShiLtJ_G0015021.1 mouse_genomes_project 11 3734331 3735470 - Snhg15 processed_transcript processed_transcript MGP_NODShiLtJ_T0017030.1 MGP_NODShiLtJ_G0015021.1 mouse_genomes_project 11 3734364 3736940 - Snhg15 processed_transcript processed_transcript MGP_NODShiLtJ_T0017031.1 MGP_NODShiLtJ_G0015021.1 mouse_genomes_project 11 3736397 3737245 - Snhg15 processed_transcript processed_transcript MGP_NODShiLtJ_T0003163.1 MGP_NODShiLtJ_G0002929.1 mouse_genomes_project 11 74893086 74896780 - Ccdc42os antisense antisense MGP_NODShiLtJ_T0012627.1 MGP_NODShiLtJ_G0010735.1 mouse_genomes_project 11 112801347 112801668 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012669.1 MGP_NODShiLtJ_G0010777.1 mouse_genomes_project 11 133184337 133184630 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012635.1 MGP_NODShiLtJ_G0010743.1 mouse_genomes_project 11 115392152 115392741 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030757.1 MGP_NODShiLtJ_G0018619.1 mouse_genomes_project 11 85685895 85698666 + MGP_NODShiLtJ_P0030757 Sdf2 protein_coding protein_coding MGP_NODShiLtJ_T0030758.1 MGP_NODShiLtJ_G0018619.1 mouse_genomes_project 11 85692692 85698666 + Sdf2 protein_coding processed_transcript MGP_NODShiLtJ_T0030759.1 MGP_NODShiLtJ_G0018619.1 mouse_genomes_project 11 85693165 85698287 + Sdf2 protein_coding retained_intron MGP_NODShiLtJ_T0012356.1 MGP_NODShiLtJ_G0010464.1 mouse_genomes_project 11 4085353 4085667 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029122.1 MGP_NODShiLtJ_G0018250.1 mouse_genomes_project 11 64971101 64982379 - MGP_NODShiLtJ_P0029122 Zfp867 protein_coding protein_coding MGP_NODShiLtJ_T0006205.1 MGP_NODShiLtJ_G0005181.1 mouse_genomes_project 11 78181872 78238789 + 9230020A06Rik lincRNA lincRNA MGP_NODShiLtJ_T0006206.1 MGP_NODShiLtJ_G0005181.1 mouse_genomes_project 11 78213352 78238082 + 9230020A06Rik lincRNA lincRNA MGP_NODShiLtJ_T0032377.1 MGP_NODShiLtJ_G0019062.1 mouse_genomes_project 11 111795062 111798759 + Rdm1 protein_coding processed_transcript MGP_NODShiLtJ_T0032378.1 MGP_NODShiLtJ_G0019062.1 mouse_genomes_project 11 111795877 111803974 + MGP_NODShiLtJ_P0032378 Rdm1 protein_coding protein_coding MGP_NODShiLtJ_T0032379.1 MGP_NODShiLtJ_G0019062.1 mouse_genomes_project 11 111795907 111801724 + Rdm1 protein_coding processed_transcript MGP_NODShiLtJ_T0032380.1 MGP_NODShiLtJ_G0019062.1 mouse_genomes_project 11 111796325 111803946 + MGP_NODShiLtJ_P0032380 Rdm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032381.1 MGP_NODShiLtJ_G0019062.1 mouse_genomes_project 11 111801628 111803834 + Rdm1 protein_coding retained_intron MGP_NODShiLtJ_T0032585.1 MGP_NODShiLtJ_G0019097.1 mouse_genomes_project 11 113079486 113084806 - MGP_NODShiLtJ_P0032585 Gjc1 protein_coding protein_coding MGP_NODShiLtJ_T0032586.1 MGP_NODShiLtJ_G0019097.1 mouse_genomes_project 11 113079487 113099830 - MGP_NODShiLtJ_P0032586 Gjc1 protein_coding protein_coding MGP_NODShiLtJ_T0032587.1 MGP_NODShiLtJ_G0019097.1 mouse_genomes_project 11 113079487 113099309 - MGP_NODShiLtJ_P0032587 Gjc1 protein_coding protein_coding MGP_NODShiLtJ_T0032588.1 MGP_NODShiLtJ_G0019097.1 mouse_genomes_project 11 113080639 113085701 - Gjc1 protein_coding retained_intron MGP_NODShiLtJ_T0032589.1 MGP_NODShiLtJ_G0019097.1 mouse_genomes_project 11 113081084 113099340 - Gjc1 protein_coding processed_transcript MGP_NODShiLtJ_T0009586.1 MGP_NODShiLtJ_G0007719.1 mouse_genomes_project 11 56811486 56811597 - Gm24157 miRNA miRNA MGP_NODShiLtJ_T0027591.1 MGP_NODShiLtJ_G0017843.1 mouse_genomes_project 11 1688024 1690384 - MGP_NODShiLtJ_P0027591 Uqcr10 protein_coding protein_coding MGP_NODShiLtJ_T0027592.1 MGP_NODShiLtJ_G0017843.1 mouse_genomes_project 11 1688026 1690376 - Uqcr10 protein_coding processed_transcript MGP_NODShiLtJ_T0027593.1 MGP_NODShiLtJ_G0017843.1 mouse_genomes_project 11 1688033 1690095 - Uqcr10 protein_coding processed_transcript MGP_NODShiLtJ_T0030912.1 MGP_NODShiLtJ_G0018659.1 mouse_genomes_project 11 87889655 87946786 + MGP_NODShiLtJ_P0030912 Rhbdl3 protein_coding protein_coding MGP_NODShiLtJ_T0030913.1 MGP_NODShiLtJ_G0018659.1 mouse_genomes_project 11 87909636 87914105 + Rhbdl3 protein_coding retained_intron MGP_NODShiLtJ_T0030914.1 MGP_NODShiLtJ_G0018659.1 mouse_genomes_project 11 87937221 87944513 + Rhbdl3 protein_coding retained_intron MGP_NODShiLtJ_T0009647.1 MGP_NODShiLtJ_G0007780.1 mouse_genomes_project 11 106747244 106747300 - Mir7235 miRNA miRNA MGP_NODShiLtJ_T0028291.1 MGP_NODShiLtJ_G0018004.1 mouse_genomes_project 11 35883374 35894013 + MGP_NODShiLtJ_P0028291 Kcnmb1 protein_coding protein_coding MGP_NODShiLtJ_T0003097.1 MGP_NODShiLtJ_G0002872.1 mouse_genomes_project 11 47311776 47315321 - antisense antisense MGP_NODShiLtJ_T0012336.1 MGP_NODShiLtJ_G0010444.1 mouse_genomes_project 11 507098 507470 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033704.1 MGP_NODShiLtJ_G0019335.1 mouse_genomes_project 11 131322980 131337806 - MGP_NODShiLtJ_P0033704 Eif4a3 protein_coding protein_coding MGP_NODShiLtJ_T0033705.1 MGP_NODShiLtJ_G0019335.1 mouse_genomes_project 11 131322981 131323694 - Eif4a3 protein_coding processed_transcript MGP_NODShiLtJ_T0033706.1 MGP_NODShiLtJ_G0019335.1 mouse_genomes_project 11 131322981 131323628 - Eif4a3 protein_coding processed_transcript MGP_NODShiLtJ_T0033707.1 MGP_NODShiLtJ_G0019335.1 mouse_genomes_project 11 131330049 131331120 - Eif4a3 protein_coding processed_transcript MGP_NODShiLtJ_T0033708.1 MGP_NODShiLtJ_G0019335.1 mouse_genomes_project 11 131330390 131337731 - MGP_NODShiLtJ_P0033708 Eif4a3 protein_coding protein_coding MGP_NODShiLtJ_T0033709.1 MGP_NODShiLtJ_G0019335.1 mouse_genomes_project 11 131335412 131337735 - Eif4a3 protein_coding processed_transcript MGP_NODShiLtJ_T0032795.1 MGP_NODShiLtJ_G0019144.1 mouse_genomes_project 11 116642850 116665288 + MGP_NODShiLtJ_P0032795 Dcaf7 protein_coding protein_coding MGP_NODShiLtJ_T0032796.1 MGP_NODShiLtJ_G0019144.1 mouse_genomes_project 11 116642878 116654630 + Dcaf7 protein_coding retained_intron MGP_NODShiLtJ_T0029181.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65754937 65767409 - MGP_NODShiLtJ_P0029181 Srebf1 protein_coding protein_coding MGP_NODShiLtJ_T0029182.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65754939 65777513 - MGP_NODShiLtJ_P0029182 Srebf1 protein_coding protein_coding MGP_NODShiLtJ_T0029183.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65755980 65756890 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0029184.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65756312 65767360 - MGP_NODShiLtJ_P0029184 Srebf1 protein_coding protein_coding MGP_NODShiLtJ_T0029185.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65757213 65758065 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0029186.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65757215 65758474 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0029187.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65757650 65759707 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0029188.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65758508 65759338 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0029189.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65758950 65760140 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0029190.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65760038 65763009 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0029191.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65762855 65767287 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0029192.1 MGP_NODShiLtJ_G0018264.1 mouse_genomes_project 11 65763844 65779490 - Srebf1 protein_coding processed_transcript MGP_NODShiLtJ_T0028903.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59512762 59699936 + MGP_NODShiLtJ_P0028903 Rapgef6 protein_coding protein_coding MGP_NODShiLtJ_T0028904.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59512804 59547161 + Rapgef6 protein_coding processed_transcript MGP_NODShiLtJ_T0028905.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59512805 59630747 + MGP_NODShiLtJ_P0028905 Rapgef6 protein_coding protein_coding MGP_NODShiLtJ_T0028906.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59512805 59697630 + MGP_NODShiLtJ_P0028906 Rapgef6 protein_coding protein_coding MGP_NODShiLtJ_T0028907.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59512826 59556898 + Rapgef6 protein_coding processed_transcript MGP_NODShiLtJ_T0028908.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59589453 59634602 + Rapgef6 protein_coding processed_transcript MGP_NODShiLtJ_T0028909.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59589604 59696756 + MGP_NODShiLtJ_P0028909 Rapgef6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028910.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59618106 59687791 + MGP_NODShiLtJ_P0028910 Rapgef6 protein_coding protein_coding MGP_NODShiLtJ_T0028911.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59618106 59687870 + MGP_NODShiLtJ_P0028911 Rapgef6 protein_coding protein_coding MGP_NODShiLtJ_T0028912.1 MGP_NODShiLtJ_G0018170.1 mouse_genomes_project 11 59691197 59697137 + MGP_NODShiLtJ_P0028912 Rapgef6 protein_coding protein_coding MGP_NODShiLtJ_T0030233.1 MGP_NODShiLtJ_G0018483.1 mouse_genomes_project 11 79021334 79028766 + MGP_NODShiLtJ_P0030233 Xaf1 protein_coding protein_coding MGP_NODShiLtJ_T0030234.1 MGP_NODShiLtJ_G0018483.1 mouse_genomes_project 11 79021335 79035179 + MGP_NODShiLtJ_P0030234 Xaf1 protein_coding protein_coding MGP_NODShiLtJ_T0030235.1 MGP_NODShiLtJ_G0018483.1 mouse_genomes_project 11 79021344 79031786 + MGP_NODShiLtJ_P0030235 Xaf1 protein_coding protein_coding MGP_NODShiLtJ_T0030236.1 MGP_NODShiLtJ_G0018483.1 mouse_genomes_project 11 79021368 79028454 + MGP_NODShiLtJ_P0030236 Xaf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030237.1 MGP_NODShiLtJ_G0018483.1 mouse_genomes_project 11 79021370 79028473 + Xaf1 protein_coding retained_intron MGP_NODShiLtJ_T0030812.1 MGP_NODShiLtJ_G0018632.1 mouse_genomes_project 11 85965544 85971586 - MGP_NODShiLtJ_P0030812 Tmem199 protein_coding protein_coding MGP_NODShiLtJ_T0030813.1 MGP_NODShiLtJ_G0018632.1 mouse_genomes_project 11 85965741 85967308 - Tmem199 protein_coding retained_intron MGP_NODShiLtJ_T0030814.1 MGP_NODShiLtJ_G0018632.1 mouse_genomes_project 11 85966997 85971459 - Tmem199 protein_coding retained_intron MGP_NODShiLtJ_T0030815.1 MGP_NODShiLtJ_G0018632.1 mouse_genomes_project 11 85968927 85971497 - Tmem199 protein_coding retained_intron MGP_NODShiLtJ_T0029797.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76080071 76088814 - MGP_NODShiLtJ_P0029797 Senp3 protein_coding protein_coding MGP_NODShiLtJ_T0029798.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76080072 76081933 - Senp3 protein_coding retained_intron MGP_NODShiLtJ_T0029799.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76080077 76089052 - MGP_NODShiLtJ_P0029799 Senp3 protein_coding protein_coding MGP_NODShiLtJ_T0029800.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76080231 76085087 - Senp3 protein_coding retained_intron MGP_NODShiLtJ_T0029801.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76080297 76085655 - MGP_NODShiLtJ_P0029801 Senp3 protein_coding protein_coding MGP_NODShiLtJ_T0029802.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76080909 76081400 - Senp3 protein_coding retained_intron MGP_NODShiLtJ_T0029803.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76081189 76083904 - Senp3 protein_coding processed_transcript MGP_NODShiLtJ_T0029804.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76084004 76084981 - Senp3 protein_coding retained_intron MGP_NODShiLtJ_T0029805.1 MGP_NODShiLtJ_G0018395.1 mouse_genomes_project 11 76085124 76086163 - Senp3 protein_coding retained_intron MGP_NODShiLtJ_T0017068.1 MGP_NODShiLtJ_G0015044.1 mouse_genomes_project 11 64690940 64693281 - 2610507I01Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0032290.1 MGP_NODShiLtJ_G0019044.1 mouse_genomes_project 11 111366653 111367800 - MGP_NODShiLtJ_P0032290 Coa3 protein_coding protein_coding MGP_NODShiLtJ_T0032291.1 MGP_NODShiLtJ_G0019044.1 mouse_genomes_project 11 111367023 111367629 - MGP_NODShiLtJ_P0032291 Coa3 protein_coding protein_coding MGP_NODShiLtJ_T0029032.1 MGP_NODShiLtJ_G0018208.1 mouse_genomes_project 11 63817405 63818471 - MGP_NODShiLtJ_P0029032 Olfr30 protein_coding protein_coding MGP_NODShiLtJ_T0012606.1 MGP_NODShiLtJ_G0010714.1 mouse_genomes_project 11 106450775 106451582 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006229.1 MGP_NODShiLtJ_G0005198.1 mouse_genomes_project 11 91074796 91077101 + AI662270 lincRNA lincRNA MGP_NODShiLtJ_T0006230.1 MGP_NODShiLtJ_G0005198.1 mouse_genomes_project 11 91074796 91077836 + AI662270 lincRNA lincRNA MGP_NODShiLtJ_T0006231.1 MGP_NODShiLtJ_G0005198.1 mouse_genomes_project 11 91075369 91075825 + AI662270 lincRNA lincRNA MGP_NODShiLtJ_T0098177.1 MGP_NODShiLtJ_G0036589.1 mouse_genomes_project 11 95171767 95171898 - Gm22387 scaRNA scaRNA MGP_NODShiLtJ_T0030466.1 MGP_NODShiLtJ_G0018559.1 mouse_genomes_project 11 82576762 82587220 - MGP_NODShiLtJ_P0030466 Serpinf2 protein_coding protein_coding MGP_NODShiLtJ_T0030467.1 MGP_NODShiLtJ_G0018559.1 mouse_genomes_project 11 82576766 82587821 - MGP_NODShiLtJ_P0030467 Serpinf2 protein_coding protein_coding MGP_NODShiLtJ_T0030468.1 MGP_NODShiLtJ_G0018559.1 mouse_genomes_project 11 82582960 82587911 - MGP_NODShiLtJ_P0030468 Serpinf2 protein_coding protein_coding MGP_NODShiLtJ_T0030469.1 MGP_NODShiLtJ_G0018559.1 mouse_genomes_project 11 82583479 82587898 - MGP_NODShiLtJ_P0030469 Serpinf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028111.1 MGP_NODShiLtJ_G0017960.1 mouse_genomes_project 11 30491689 30547958 + MGP_NODShiLtJ_P0028111 Smek2 protein_coding protein_coding MGP_NODShiLtJ_T0028112.1 MGP_NODShiLtJ_G0017960.1 mouse_genomes_project 11 30491689 30536652 + MGP_NODShiLtJ_P0028112 Smek2 protein_coding protein_coding MGP_NODShiLtJ_T0028113.1 MGP_NODShiLtJ_G0017960.1 mouse_genomes_project 11 30492961 30511141 + MGP_NODShiLtJ_P0028113 Smek2 protein_coding protein_coding MGP_NODShiLtJ_T0028114.1 MGP_NODShiLtJ_G0017960.1 mouse_genomes_project 11 30520672 30524596 + Smek2 protein_coding processed_transcript MGP_NODShiLtJ_T0028115.1 MGP_NODShiLtJ_G0017960.1 mouse_genomes_project 11 30520683 30534417 + MGP_NODShiLtJ_P0028115 Smek2 protein_coding protein_coding MGP_NODShiLtJ_T0028116.1 MGP_NODShiLtJ_G0017960.1 mouse_genomes_project 11 30530226 30545712 + Smek2 protein_coding processed_transcript MGP_NODShiLtJ_T0028117.1 MGP_NODShiLtJ_G0017960.1 mouse_genomes_project 11 30540784 30547958 + MGP_NODShiLtJ_P0028117 Smek2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029817.1 MGP_NODShiLtJ_G0018400.1 mouse_genomes_project 11 76209145 76211224 - MGP_NODShiLtJ_P0029817 Slc35g3 protein_coding protein_coding MGP_NODShiLtJ_T0099932.1 MGP_NODShiLtJ_G0038326.1 mouse_genomes_project 11 68408586 68408658 + Snord65 snoRNA snoRNA MGP_NODShiLtJ_T0028958.1 MGP_NODShiLtJ_G0018183.1 mouse_genomes_project 11 60453248 60482613 - MGP_NODShiLtJ_P0028958 Sparc protein_coding protein_coding MGP_NODShiLtJ_T0028959.1 MGP_NODShiLtJ_G0018183.1 mouse_genomes_project 11 60453249 60482431 - MGP_NODShiLtJ_P0028959 Sparc protein_coding protein_coding MGP_NODShiLtJ_T0028960.1 MGP_NODShiLtJ_G0018183.1 mouse_genomes_project 11 60454132 60458418 - Sparc protein_coding processed_transcript MGP_NODShiLtJ_T0028961.1 MGP_NODShiLtJ_G0018183.1 mouse_genomes_project 11 60454265 60460867 - Sparc protein_coding processed_transcript MGP_NODShiLtJ_T0028962.1 MGP_NODShiLtJ_G0018183.1 mouse_genomes_project 11 60458095 60482431 - MGP_NODShiLtJ_P0028962 Sparc protein_coding protein_coding MGP_NODShiLtJ_T0028963.1 MGP_NODShiLtJ_G0018183.1 mouse_genomes_project 11 60469026 60482433 - Sparc protein_coding processed_transcript MGP_NODShiLtJ_T0009670.1 MGP_NODShiLtJ_G0007803.1 mouse_genomes_project 11 118427797 118427855 + Mir6932 miRNA miRNA MGP_NODShiLtJ_T0028065.1 MGP_NODShiLtJ_G0017949.1 mouse_genomes_project 11 23895014 23931356 - MGP_NODShiLtJ_P0028065 Rel protein_coding protein_coding MGP_NODShiLtJ_T0003094.1 MGP_NODShiLtJ_G0002869.1 mouse_genomes_project 11 46873856 46945031 - Gm12146 antisense antisense MGP_NODShiLtJ_T0032568.1 MGP_NODShiLtJ_G0019094.1 mouse_genomes_project 11 112930884 112941515 + MGP_NODShiLtJ_P0032568 Meioc protein_coding protein_coding MGP_NODShiLtJ_T0032569.1 MGP_NODShiLtJ_G0019094.1 mouse_genomes_project 11 112932758 112948833 + MGP_NODShiLtJ_P0032569 Meioc protein_coding protein_coding MGP_NODShiLtJ_T0032570.1 MGP_NODShiLtJ_G0019094.1 mouse_genomes_project 11 112932793 112940331 + Meioc protein_coding processed_transcript MGP_NODShiLtJ_T0011204.1 MGP_NODShiLtJ_G0009337.1 mouse_genomes_project 11 112713268 112713519 - Gm23563 misc_RNA misc_RNA MGP_NODShiLtJ_T0027944.1 MGP_NODShiLtJ_G0017924.1 mouse_genomes_project 11 20170944 20291796 + MGP_NODShiLtJ_P0027944 Sertad2 protein_coding protein_coding MGP_NODShiLtJ_T0027945.1 MGP_NODShiLtJ_G0017924.1 mouse_genomes_project 11 20269507 20291796 + MGP_NODShiLtJ_P0027945 Sertad2 protein_coding protein_coding MGP_NODShiLtJ_T0027946.1 MGP_NODShiLtJ_G0017924.1 mouse_genomes_project 11 20285930 20287841 + MGP_NODShiLtJ_P0027946 Sertad2 protein_coding protein_coding MGP_NODShiLtJ_T0029543.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73689947 73906256 + Gas7 protein_coding processed_transcript MGP_NODShiLtJ_T0029544.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73784919 73822974 + Gas7 protein_coding processed_transcript MGP_NODShiLtJ_T0029545.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73823941 73842816 + Gas7 protein_coding processed_transcript MGP_NODShiLtJ_T0029546.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73823977 73930294 + MGP_NODShiLtJ_P0029546 Gas7 protein_coding protein_coding MGP_NODShiLtJ_T0029547.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73833955 73930278 + MGP_NODShiLtJ_P0029547 Gas7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029548.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73833988 73911477 + Gas7 protein_coding processed_transcript MGP_NODShiLtJ_T0029549.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73833998 73906241 + Gas7 protein_coding processed_transcript MGP_NODShiLtJ_T0029550.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73892906 73925018 + Gas7 protein_coding processed_transcript MGP_NODShiLtJ_T0029552.1 MGP_NODShiLtJ_G0018340.1 mouse_genomes_project 11 73923501 73924894 + Gas7 protein_coding processed_transcript MGP_NODShiLtJ_T0006180.1 MGP_NODShiLtJ_G0005160.1 mouse_genomes_project 11 64314693 64315867 + Gm12259 lincRNA lincRNA MGP_NODShiLtJ_T0030509.1 MGP_NODShiLtJ_G0018568.1 mouse_genomes_project 11 82816289 82841715 + MGP_NODShiLtJ_P0030509 Myo1c protein_coding protein_coding MGP_NODShiLtJ_T0030510.1 MGP_NODShiLtJ_G0018568.1 mouse_genomes_project 11 82821969 82837392 + Myo1c protein_coding retained_intron MGP_NODShiLtJ_T0030511.1 MGP_NODShiLtJ_G0018568.1 mouse_genomes_project 11 82822004 82840441 + MGP_NODShiLtJ_P0030511 Myo1c protein_coding protein_coding MGP_NODShiLtJ_T0030512.1 MGP_NODShiLtJ_G0018568.1 mouse_genomes_project 11 82822018 82823469 + MGP_NODShiLtJ_P0030512 Myo1c protein_coding protein_coding MGP_NODShiLtJ_T0030513.1 MGP_NODShiLtJ_G0018568.1 mouse_genomes_project 11 82827558 82832781 + Myo1c protein_coding retained_intron MGP_NODShiLtJ_T0030514.1 MGP_NODShiLtJ_G0018568.1 mouse_genomes_project 11 82832263 82837047 + Myo1c protein_coding retained_intron MGP_NODShiLtJ_T0030515.1 MGP_NODShiLtJ_G0018568.1 mouse_genomes_project 11 82835898 82838059 + Myo1c protein_coding retained_intron MGP_NODShiLtJ_T0030516.1 MGP_NODShiLtJ_G0018568.1 mouse_genomes_project 11 82838080 82839532 + Myo1c protein_coding retained_intron MGP_NODShiLtJ_T0009646.1 MGP_NODShiLtJ_G0007779.1 mouse_genomes_project 11 106655256 106655363 + Mir8103 miRNA miRNA MGP_NODShiLtJ_T0006164.1 MGP_NODShiLtJ_G0005145.1 mouse_genomes_project 11 48443374 48448174 + 4930597A21Rik lincRNA lincRNA MGP_NODShiLtJ_T0012534.1 MGP_NODShiLtJ_G0010642.1 mouse_genomes_project 11 76605856 76606230 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033466.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128314193 128319922 + MGP_NODShiLtJ_P0033466 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033467.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128314389 128318965 + MGP_NODShiLtJ_P0033467 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033468.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128314430 128318549 + Sphk1 protein_coding retained_intron MGP_NODShiLtJ_T0033469.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128315008 128319922 + MGP_NODShiLtJ_P0033469 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033470.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128315175 128319935 + MGP_NODShiLtJ_P0033470 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033471.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128315708 128319939 + MGP_NODShiLtJ_P0033471 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033472.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128315715 128319933 + Sphk1 protein_coding retained_intron MGP_NODShiLtJ_T0033473.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128315718 128318977 + MGP_NODShiLtJ_P0033473 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033474.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128315721 128318606 + MGP_NODShiLtJ_P0033474 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033475.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128315737 128319939 + MGP_NODShiLtJ_P0033475 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033476.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128316189 128319922 + MGP_NODShiLtJ_P0033476 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033477.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128316515 128318901 + Sphk1 protein_coding processed_transcript MGP_NODShiLtJ_T0033478.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128316532 128319260 + MGP_NODShiLtJ_P0033478 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033479.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128316839 128318963 + MGP_NODShiLtJ_P0033479 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0033480.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128317424 128318553 + Sphk1 protein_coding retained_intron MGP_NODShiLtJ_T0033481.1 MGP_NODShiLtJ_G0019287.1 mouse_genomes_project 11 128318004 128319935 + MGP_NODShiLtJ_P0033481 Sphk1 protein_coding protein_coding MGP_NODShiLtJ_T0011690.1 MGP_NODShiLtJ_G0009820.1 mouse_genomes_project 11 81331230 81332201 + MGP_NODShiLtJ_P0011690 Olfr409-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0012422.1 MGP_NODShiLtJ_G0010530.1 mouse_genomes_project 11 30938935 30939815 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009629.1 MGP_NODShiLtJ_G0007762.1 mouse_genomes_project 11 85616169 85616230 + Mir7653 miRNA miRNA MGP_NODShiLtJ_T0012385.1 MGP_NODShiLtJ_G0010493.1 mouse_genomes_project 11 19183111 19184229 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032612.1 MGP_NODShiLtJ_G0019103.1 mouse_genomes_project 11 113188076 113209541 - MGP_NODShiLtJ_P0032612 Kif18b protein_coding protein_coding MGP_NODShiLtJ_T0032613.1 MGP_NODShiLtJ_G0019103.1 mouse_genomes_project 11 113199401 113209505 - Kif18b protein_coding processed_transcript MGP_NODShiLtJ_T0097903.1 MGP_NODShiLtJ_G0036315.1 mouse_genomes_project 11 128088664 128088780 - n-R5s74 rRNA rRNA MGP_NODShiLtJ_T0012529.1 MGP_NODShiLtJ_G0010637.1 mouse_genomes_project 11 75427669 75427840 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033117.1 MGP_NODShiLtJ_G0019216.1 mouse_genomes_project 11 126351611 126359485 + MGP_NODShiLtJ_P0033117 Gpr142 protein_coding protein_coding MGP_NODShiLtJ_T0033118.1 MGP_NODShiLtJ_G0019216.1 mouse_genomes_project 11 126351611 126359485 + MGP_NODShiLtJ_P0033118 Gpr142 protein_coding protein_coding MGP_NODShiLtJ_T0012595.1 MGP_NODShiLtJ_G0010703.1 mouse_genomes_project 11 101834044 101836292 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099950.1 MGP_NODShiLtJ_G0038344.1 mouse_genomes_project 11 87421459 87421591 - Gm24454 snoRNA snoRNA MGP_NODShiLtJ_T0003188.1 MGP_NODShiLtJ_G0002951.1 mouse_genomes_project 11 89057128 89074605 + 4930527B05Rik antisense antisense MGP_NODShiLtJ_T0012585.1 MGP_NODShiLtJ_G0010693.1 mouse_genomes_project 11 95495846 95496118 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098714.1 MGP_NODShiLtJ_G0037108.1 mouse_genomes_project 11 95946261 95946361 - Gm25968 snRNA snRNA MGP_NODShiLtJ_T0006154.1 MGP_NODShiLtJ_G0005135.1 mouse_genomes_project 11 36069115 36070733 + Gm12121 lincRNA lincRNA MGP_NODShiLtJ_T0099907.1 MGP_NODShiLtJ_G0038301.1 mouse_genomes_project 11 14424705 14424835 + Gm25490 snoRNA snoRNA MGP_NODShiLtJ_T0030183.1 MGP_NODShiLtJ_G0018470.1 mouse_genomes_project 11 77613934 77626175 - MGP_NODShiLtJ_P0030183 Derl2 protein_coding protein_coding MGP_NODShiLtJ_T0030184.1 MGP_NODShiLtJ_G0018470.1 mouse_genomes_project 11 77614113 77626181 - MGP_NODShiLtJ_P0030184 Derl2 protein_coding protein_coding MGP_NODShiLtJ_T0030185.1 MGP_NODShiLtJ_G0018470.1 mouse_genomes_project 11 77617301 77626208 - MGP_NODShiLtJ_P0030185 Derl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030186.1 MGP_NODShiLtJ_G0018470.1 mouse_genomes_project 11 77619072 77626182 - Derl2 protein_coding retained_intron MGP_NODShiLtJ_T0030187.1 MGP_NODShiLtJ_G0018470.1 mouse_genomes_project 11 77620055 77626214 - MGP_NODShiLtJ_P0030187 Derl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030188.1 MGP_NODShiLtJ_G0018470.1 mouse_genomes_project 11 77621499 77626151 - MGP_NODShiLtJ_P0030188 Derl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030378.1 MGP_NODShiLtJ_G0018537.1 mouse_genomes_project 11 81268653 81269742 + MGP_NODShiLtJ_P0030378 Olfr406 protein_coding protein_coding MGP_NODShiLtJ_T0031071.1 MGP_NODShiLtJ_G0018711.1 mouse_genomes_project 11 91750551 91807704 + MGP_NODShiLtJ_P0031071 Hnf1b protein_coding protein_coding MGP_NODShiLtJ_T0031072.1 MGP_NODShiLtJ_G0018711.1 mouse_genomes_project 11 91750726 91807710 + MGP_NODShiLtJ_P0031072 Hnf1b protein_coding protein_coding MGP_NODShiLtJ_T0031073.1 MGP_NODShiLtJ_G0018711.1 mouse_genomes_project 11 91751919 91764870 + MGP_NODShiLtJ_P0031073 Hnf1b protein_coding protein_coding MGP_NODShiLtJ_T0033524.1 MGP_NODShiLtJ_G0019298.1 mouse_genomes_project 11 128648123 128654382 + MGP_NODShiLtJ_P0033524 Mettl23 protein_coding protein_coding MGP_NODShiLtJ_T0033525.1 MGP_NODShiLtJ_G0019298.1 mouse_genomes_project 11 128648400 128655862 + Mettl23 protein_coding retained_intron MGP_NODShiLtJ_T0033526.1 MGP_NODShiLtJ_G0019298.1 mouse_genomes_project 11 128648406 128650985 + Mettl23 protein_coding retained_intron MGP_NODShiLtJ_T0033527.1 MGP_NODShiLtJ_G0019298.1 mouse_genomes_project 11 128648430 128650907 + Mettl23 protein_coding retained_intron MGP_NODShiLtJ_T0033528.1 MGP_NODShiLtJ_G0019298.1 mouse_genomes_project 11 128648520 128654564 + MGP_NODShiLtJ_P0033528 Mettl23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033529.1 MGP_NODShiLtJ_G0019298.1 mouse_genomes_project 11 128648520 128653219 + MGP_NODShiLtJ_P0033529 Mettl23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033530.1 MGP_NODShiLtJ_G0019298.1 mouse_genomes_project 11 128654411 128659771 + MGP_NODShiLtJ_P0033530 Mettl23 protein_coding protein_coding MGP_NODShiLtJ_T0003175.1 MGP_NODShiLtJ_G0002939.1 mouse_genomes_project 11 83041469 83041995 + Gm16075 antisense antisense MGP_NODShiLtJ_T0097898.1 MGP_NODShiLtJ_G0036310.1 mouse_genomes_project 11 93874564 93874680 + Gm23473 rRNA rRNA MGP_NODShiLtJ_T0029455.1 MGP_NODShiLtJ_G0018314.1 mouse_genomes_project 11 68684227 68717080 + MGP_NODShiLtJ_P0029455 Fbxw10 protein_coding protein_coding MGP_NODShiLtJ_T0029456.1 MGP_NODShiLtJ_G0018314.1 mouse_genomes_project 11 68684281 68717077 + MGP_NODShiLtJ_P0029456 Fbxw10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029457.1 MGP_NODShiLtJ_G0018314.1 mouse_genomes_project 11 68684281 68717077 + MGP_NODShiLtJ_P0029457 Fbxw10 protein_coding protein_coding MGP_NODShiLtJ_T0029458.1 MGP_NODShiLtJ_G0018314.1 mouse_genomes_project 11 68684286 68688827 + Fbxw10 protein_coding retained_intron MGP_NODShiLtJ_T0029459.1 MGP_NODShiLtJ_G0018314.1 mouse_genomes_project 11 68684290 68717058 + MGP_NODShiLtJ_P0029459 Fbxw10 protein_coding protein_coding MGP_NODShiLtJ_T0029460.1 MGP_NODShiLtJ_G0018314.1 mouse_genomes_project 11 68714488 68716368 + Fbxw10 protein_coding processed_transcript MGP_NODShiLtJ_T0028565.1 MGP_NODShiLtJ_G0018086.1 mouse_genomes_project 11 54076756 54096633 + Flt4 protein_coding processed_transcript MGP_NODShiLtJ_T0028566.1 MGP_NODShiLtJ_G0018086.1 mouse_genomes_project 11 54076756 54123614 + MGP_NODShiLtJ_P0028566 Flt4 protein_coding protein_coding MGP_NODShiLtJ_T0030655.1 MGP_NODShiLtJ_G0018601.1 mouse_genomes_project 11 85071626 85105169 + MGP_NODShiLtJ_P0030655 Nufip2 protein_coding protein_coding MGP_NODShiLtJ_T0030656.1 MGP_NODShiLtJ_G0018601.1 mouse_genomes_project 11 85071643 85135814 + MGP_NODShiLtJ_P0030656 Nufip2 protein_coding protein_coding MGP_NODShiLtJ_T0030657.1 MGP_NODShiLtJ_G0018601.1 mouse_genomes_project 11 85072930 85078200 + Nufip2 protein_coding processed_transcript MGP_NODShiLtJ_T0030658.1 MGP_NODShiLtJ_G0018601.1 mouse_genomes_project 11 85073074 85077998 + Nufip2 protein_coding processed_transcript MGP_NODShiLtJ_T0012619.1 MGP_NODShiLtJ_G0010727.1 mouse_genomes_project 11 109948089 109948548 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032801.1 MGP_NODShiLtJ_G0019147.1 mouse_genomes_project 11 116772323 116776210 - MGP_NODShiLtJ_P0032801 Limd2 protein_coding protein_coding MGP_NODShiLtJ_T0032802.1 MGP_NODShiLtJ_G0019147.1 mouse_genomes_project 11 116774381 116775477 - Limd2 protein_coding processed_transcript MGP_NODShiLtJ_T0032803.1 MGP_NODShiLtJ_G0019147.1 mouse_genomes_project 11 116774498 116775995 - MGP_NODShiLtJ_P0032803 Limd2 protein_coding protein_coding MGP_NODShiLtJ_T0032804.1 MGP_NODShiLtJ_G0019147.1 mouse_genomes_project 11 116774718 116777751 - MGP_NODShiLtJ_P0032804 Limd2 protein_coding protein_coding MGP_NODShiLtJ_T0027888.1 MGP_NODShiLtJ_G0017907.1 mouse_genomes_project 11 15445411 15626734 + MGP_NODShiLtJ_P0027888 Vstm2a protein_coding protein_coding MGP_NODShiLtJ_T0027889.1 MGP_NODShiLtJ_G0017907.1 mouse_genomes_project 11 15445649 15477318 + MGP_NODShiLtJ_P0027889 Vstm2a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003220.1 MGP_NODShiLtJ_G0002974.1 mouse_genomes_project 11 105842937 105858651 - Hoxb5os antisense antisense MGP_NODShiLtJ_T0003221.1 MGP_NODShiLtJ_G0002974.1 mouse_genomes_project 11 105845392 105856822 - Hoxb5os antisense antisense MGP_NODShiLtJ_T0012582.1 MGP_NODShiLtJ_G0010690.1 mouse_genomes_project 11 94303708 94303996 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012367.1 MGP_NODShiLtJ_G0010475.1 mouse_genomes_project 11 13105563 13105966 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003264.1 MGP_NODShiLtJ_G0003010.1 mouse_genomes_project 11 116673008 116674237 - Taco1os antisense antisense MGP_NODShiLtJ_T0006189.1 MGP_NODShiLtJ_G0005168.1 mouse_genomes_project 11 68560828 68565812 + lincRNA lincRNA MGP_NODShiLtJ_T0003219.1 MGP_NODShiLtJ_G0002973.1 mouse_genomes_project 11 105496622 105499726 + Gm29202 antisense antisense MGP_NODShiLtJ_T0101421.1 MGP_NODShiLtJ_G0039617.1 mouse_genomes_project 11 113003380 113029129 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0028206.1 MGP_NODShiLtJ_G0017981.1 mouse_genomes_project 11 33671942 33735690 + MGP_NODShiLtJ_P0028206 Nsg2 protein_coding protein_coding MGP_NODShiLtJ_T0028207.1 MGP_NODShiLtJ_G0017981.1 mouse_genomes_project 11 33671942 33692555 + MGP_NODShiLtJ_P0028207 Nsg2 protein_coding protein_coding MGP_NODShiLtJ_T0028208.1 MGP_NODShiLtJ_G0017981.1 mouse_genomes_project 11 33671981 33709662 + MGP_NODShiLtJ_P0028208 Nsg2 protein_coding protein_coding MGP_NODShiLtJ_T0012637.1 MGP_NODShiLtJ_G0010745.1 mouse_genomes_project 11 115502829 115503869 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006311.1 MGP_NODShiLtJ_G0005256.1 mouse_genomes_project 11 131127527 131132629 - Gm11754 lincRNA lincRNA MGP_NODShiLtJ_T0098696.1 MGP_NODShiLtJ_G0037090.1 mouse_genomes_project 11 80639892 80639999 + Gm22381 snRNA snRNA MGP_NODShiLtJ_T0012489.1 MGP_NODShiLtJ_G0010597.1 mouse_genomes_project 11 59156160 59156420 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003065.1 MGP_NODShiLtJ_G0002847.1 mouse_genomes_project 11 3054071 3055516 + Gm11967 antisense antisense MGP_NODShiLtJ_T0031332.1 MGP_NODShiLtJ_G0018769.1 mouse_genomes_project 11 96397438 96405025 + MGP_NODShiLtJ_P0031332 Srsf1 protein_coding protein_coding MGP_NODShiLtJ_T0031333.1 MGP_NODShiLtJ_G0018769.1 mouse_genomes_project 11 96397784 96401558 + MGP_NODShiLtJ_P0031333 Srsf1 protein_coding protein_coding MGP_NODShiLtJ_T0031334.1 MGP_NODShiLtJ_G0018769.1 mouse_genomes_project 11 96397791 96398896 + Srsf1 protein_coding retained_intron MGP_NODShiLtJ_T0031335.1 MGP_NODShiLtJ_G0018769.1 mouse_genomes_project 11 96397872 96400479 + MGP_NODShiLtJ_P0031335 Srsf1 protein_coding protein_coding MGP_NODShiLtJ_T0031336.1 MGP_NODShiLtJ_G0018769.1 mouse_genomes_project 11 96398636 96401540 + MGP_NODShiLtJ_P0031336 Srsf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031337.1 MGP_NODShiLtJ_G0018769.1 mouse_genomes_project 11 96398658 96401191 + MGP_NODShiLtJ_P0031337 Srsf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031338.1 MGP_NODShiLtJ_G0018769.1 mouse_genomes_project 11 96399481 96401120 + Srsf1 protein_coding retained_intron MGP_NODShiLtJ_T0012434.1 MGP_NODShiLtJ_G0010542.1 mouse_genomes_project 11 32718385 32719164 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003231.1 MGP_NODShiLtJ_G0002983.1 mouse_genomes_project 11 108174077 108175087 + Gm12352 antisense antisense MGP_NODShiLtJ_T0028128.1 MGP_NODShiLtJ_G0017963.1 mouse_genomes_project 11 30895155 30898423 - MGP_NODShiLtJ_P0028128 Prorsd1 protein_coding protein_coding MGP_NODShiLtJ_T0028129.1 MGP_NODShiLtJ_G0017963.1 mouse_genomes_project 11 30896273 30898425 - MGP_NODShiLtJ_P0028129 Prorsd1 protein_coding protein_coding MGP_NODShiLtJ_T0031660.1 MGP_NODShiLtJ_G0018857.1 mouse_genomes_project 11 105874852 105902041 + MGP_NODShiLtJ_P0031660 Hoxb3 protein_coding protein_coding MGP_NODShiLtJ_T0031661.1 MGP_NODShiLtJ_G0018857.1 mouse_genomes_project 11 105880956 105898411 + MGP_NODShiLtJ_P0031661 Hoxb3 protein_coding protein_coding MGP_NODShiLtJ_T0031662.1 MGP_NODShiLtJ_G0018857.1 mouse_genomes_project 11 105895103 105895879 + Hoxb3 protein_coding processed_transcript MGP_NODShiLtJ_T0031663.1 MGP_NODShiLtJ_G0018857.1 mouse_genomes_project 11 105897876 105900618 + MGP_NODShiLtJ_P0031663 Hoxb3 protein_coding protein_coding MGP_NODShiLtJ_T0033155.1 MGP_NODShiLtJ_G0019230.1 mouse_genomes_project 11 126832644 126850483 + MGP_NODShiLtJ_P0033155 Slc9a3r1 protein_coding protein_coding MGP_NODShiLtJ_T0012601.1 MGP_NODShiLtJ_G0010709.1 mouse_genomes_project 11 105189104 105189412 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098723.1 MGP_NODShiLtJ_G0037117.1 mouse_genomes_project 11 108646750 108646854 - Gm23640 snRNA snRNA MGP_NODShiLtJ_T0012545.1 MGP_NODShiLtJ_G0010653.1 mouse_genomes_project 11 80194889 80195276 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0029467.1 MGP_NODShiLtJ_G0018318.1 mouse_genomes_project 11 68980486 69011042 + MGP_NODShiLtJ_P0029467 Pmp22 protein_coding protein_coding MGP_NODShiLtJ_T0029468.1 MGP_NODShiLtJ_G0018318.1 mouse_genomes_project 11 68983016 69011043 + MGP_NODShiLtJ_P0029468 Pmp22 protein_coding protein_coding MGP_NODShiLtJ_T0029469.1 MGP_NODShiLtJ_G0018318.1 mouse_genomes_project 11 68984073 69009980 + MGP_NODShiLtJ_P0029469 Pmp22 protein_coding protein_coding MGP_NODShiLtJ_T0029470.1 MGP_NODShiLtJ_G0018318.1 mouse_genomes_project 11 68984307 68985994 + Pmp22 protein_coding processed_transcript MGP_NODShiLtJ_T0029471.1 MGP_NODShiLtJ_G0018318.1 mouse_genomes_project 11 68984572 69010062 + MGP_NODShiLtJ_P0029471 Pmp22 protein_coding protein_coding MGP_NODShiLtJ_T0027511.1 MGP_NODShiLtJ_G0017822.1 mouse_genomes_project 11 790001 794166 + MGP_NODShiLtJ_P0027511 Dusp18 protein_coding protein_coding MGP_NODShiLtJ_T0027512.1 MGP_NODShiLtJ_G0017822.1 mouse_genomes_project 11 790001 796113 + MGP_NODShiLtJ_P0027512 Dusp18 protein_coding protein_coding MGP_NODShiLtJ_T0098713.1 MGP_NODShiLtJ_G0037107.1 mouse_genomes_project 11 95660409 95660516 - Gm23137 snRNA snRNA MGP_NODShiLtJ_T0030522.1 MGP_NODShiLtJ_G0018570.1 mouse_genomes_project 11 82906415 82941829 + MGP_NODShiLtJ_P0030522 Ywhae protein_coding protein_coding MGP_NODShiLtJ_T0030523.1 MGP_NODShiLtJ_G0018570.1 mouse_genomes_project 11 82906459 82940609 + MGP_NODShiLtJ_P0030523 Ywhae protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030524.1 MGP_NODShiLtJ_G0018570.1 mouse_genomes_project 11 82906507 82933102 + Ywhae protein_coding retained_intron MGP_NODShiLtJ_T0030525.1 MGP_NODShiLtJ_G0018570.1 mouse_genomes_project 11 82906694 82932858 + MGP_NODShiLtJ_P0030525 Ywhae protein_coding protein_coding MGP_NODShiLtJ_T0030526.1 MGP_NODShiLtJ_G0018570.1 mouse_genomes_project 11 82927701 82935300 + Ywhae protein_coding retained_intron MGP_NODShiLtJ_T0029174.1 MGP_NODShiLtJ_G0018263.1 mouse_genomes_project 11 65658832 65755048 + Rai1 protein_coding processed_transcript MGP_NODShiLtJ_T0029175.1 MGP_NODShiLtJ_G0018263.1 mouse_genomes_project 11 65658832 65755046 + MGP_NODShiLtJ_P0029175 Rai1 protein_coding protein_coding MGP_NODShiLtJ_T0029176.1 MGP_NODShiLtJ_G0018263.1 mouse_genomes_project 11 65658996 65740133 + MGP_NODShiLtJ_P0029176 Rai1 protein_coding protein_coding MGP_NODShiLtJ_T0029177.1 MGP_NODShiLtJ_G0018263.1 mouse_genomes_project 11 65693834 65755046 + MGP_NODShiLtJ_P0029177 Rai1 protein_coding protein_coding MGP_NODShiLtJ_T0029178.1 MGP_NODShiLtJ_G0018263.1 mouse_genomes_project 11 65693836 65746727 + MGP_NODShiLtJ_P0029178 Rai1 protein_coding protein_coding MGP_NODShiLtJ_T0029179.1 MGP_NODShiLtJ_G0018263.1 mouse_genomes_project 11 65694011 65694975 + Rai1 protein_coding processed_transcript MGP_NODShiLtJ_T0029180.1 MGP_NODShiLtJ_G0018263.1 mouse_genomes_project 11 65730600 65755048 + MGP_NODShiLtJ_P0029180 Rai1 protein_coding protein_coding MGP_NODShiLtJ_T0029057.1 MGP_NODShiLtJ_G0018226.1 mouse_genomes_project 11 64221338 64231326 - MGP_NODShiLtJ_P0029057 Fam183b protein_coding protein_coding MGP_NODShiLtJ_T0029058.1 MGP_NODShiLtJ_G0018226.1 mouse_genomes_project 11 64221352 64231326 - MGP_NODShiLtJ_P0029058 Fam183b protein_coding protein_coding MGP_NODShiLtJ_T0029490.1 MGP_NODShiLtJ_G0018326.1 mouse_genomes_project 11 71203309 71304714 - MGP_NODShiLtJ_P0029490 Myocd protein_coding protein_coding MGP_NODShiLtJ_T0029491.1 MGP_NODShiLtJ_G0018326.1 mouse_genomes_project 11 71203321 71304762 - MGP_NODShiLtJ_P0029491 Myocd protein_coding protein_coding MGP_NODShiLtJ_T0029492.1 MGP_NODShiLtJ_G0018326.1 mouse_genomes_project 11 71203517 71210080 - Myocd protein_coding processed_transcript MGP_NODShiLtJ_T0029493.1 MGP_NODShiLtJ_G0018326.1 mouse_genomes_project 11 71205181 71250638 - MGP_NODShiLtJ_P0029493 Myocd protein_coding protein_coding MGP_NODShiLtJ_T0029494.1 MGP_NODShiLtJ_G0018326.1 mouse_genomes_project 11 71228335 71237632 - MGP_NODShiLtJ_P0029494 Myocd protein_coding protein_coding MGP_NODShiLtJ_T0029495.1 MGP_NODShiLtJ_G0018326.1 mouse_genomes_project 11 71255812 71304627 - Myocd protein_coding processed_transcript MGP_NODShiLtJ_T0003168.1 MGP_NODShiLtJ_G0002934.1 mouse_genomes_project 11 75832795 75837924 + Dnah2os antisense antisense MGP_NODShiLtJ_T0099909.1 MGP_NODShiLtJ_G0038303.1 mouse_genomes_project 11 20941877 20942016 - Gm23582 snoRNA snoRNA MGP_NODShiLtJ_T0098731.1 MGP_NODShiLtJ_G0037125.1 mouse_genomes_project 11 115563374 115563479 + Gm25362 snRNA snRNA MGP_NODShiLtJ_T0028671.1 MGP_NODShiLtJ_G0018109.1 mouse_genomes_project 11 55477274 55488632 - MGP_NODShiLtJ_P0028671 Zfp354b protein_coding protein_coding MGP_NODShiLtJ_T0028672.1 MGP_NODShiLtJ_G0018109.1 mouse_genomes_project 11 55484950 55488569 - MGP_NODShiLtJ_P0028672 Zfp354b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028673.1 MGP_NODShiLtJ_G0018109.1 mouse_genomes_project 11 55485565 55487648 - Zfp354b protein_coding processed_transcript MGP_NODShiLtJ_T0034052.1 MGP_NODShiLtJ_G0019403.1 mouse_genomes_project 11 133560182 133595690 - MGP_NODShiLtJ_P0034052 Rab40b protein_coding protein_coding MGP_NODShiLtJ_T0034053.1 MGP_NODShiLtJ_G0019403.1 mouse_genomes_project 11 133562059 133595504 - Rab40b protein_coding processed_transcript MGP_NODShiLtJ_T0034054.1 MGP_NODShiLtJ_G0019403.1 mouse_genomes_project 11 133563648 133595660 - Rab40b protein_coding processed_transcript MGP_NODShiLtJ_T0034055.1 MGP_NODShiLtJ_G0019403.1 mouse_genomes_project 11 133563667 133595669 - Rab40b protein_coding processed_transcript MGP_NODShiLtJ_T0028563.1 MGP_NODShiLtJ_G0018084.1 mouse_genomes_project 11 53917986 53923451 + MGP_NODShiLtJ_P0028563 Olfr1385 protein_coding protein_coding MGP_NODShiLtJ_T0012657.1 MGP_NODShiLtJ_G0010765.1 mouse_genomes_project 11 127188278 127188437 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030454.1 MGP_NODShiLtJ_G0018557.1 mouse_genomes_project 11 82492746 82552141 + MGP_NODShiLtJ_P0030454 Smyd4 protein_coding protein_coding MGP_NODShiLtJ_T0030455.1 MGP_NODShiLtJ_G0018557.1 mouse_genomes_project 11 82492808 82526336 + Smyd4 protein_coding retained_intron MGP_NODShiLtJ_T0030456.1 MGP_NODShiLtJ_G0018557.1 mouse_genomes_project 11 82533322 82536526 + Smyd4 protein_coding processed_transcript MGP_NODShiLtJ_T0030457.1 MGP_NODShiLtJ_G0018557.1 mouse_genomes_project 11 82546043 82547068 + Smyd4 protein_coding processed_transcript MGP_NODShiLtJ_T0032044.1 MGP_NODShiLtJ_G0018964.1 mouse_genomes_project 11 109546567 109549082 - MGP_NODShiLtJ_P0032044 Krtap4-6 protein_coding protein_coding MGP_NODShiLtJ_T0032058.1 MGP_NODShiLtJ_G0018978.1 mouse_genomes_project 11 109810386 109811414 + MGP_NODShiLtJ_P0032058 Krtap9-1 protein_coding protein_coding MGP_NODShiLtJ_T0030885.1 MGP_NODShiLtJ_G0018653.1 mouse_genomes_project 11 87607674 87643850 - MGP_NODShiLtJ_P0030885 Crlf3 protein_coding protein_coding MGP_NODShiLtJ_T0030886.1 MGP_NODShiLtJ_G0018653.1 mouse_genomes_project 11 87607674 87643867 - MGP_NODShiLtJ_P0030886 Crlf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030887.1 MGP_NODShiLtJ_G0018653.1 mouse_genomes_project 11 87607674 87643850 - MGP_NODShiLtJ_P0030887 Crlf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030888.1 MGP_NODShiLtJ_G0018653.1 mouse_genomes_project 11 87616293 87643874 - Crlf3 protein_coding processed_transcript MGP_NODShiLtJ_T0030889.1 MGP_NODShiLtJ_G0018653.1 mouse_genomes_project 11 87616415 87618098 - Crlf3 protein_coding retained_intron MGP_NODShiLtJ_T0030890.1 MGP_NODShiLtJ_G0018653.1 mouse_genomes_project 11 87619510 87643799 - MGP_NODShiLtJ_P0030890 Crlf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030891.1 MGP_NODShiLtJ_G0018653.1 mouse_genomes_project 11 87622899 87643876 - Crlf3 protein_coding retained_intron MGP_NODShiLtJ_T0006245.1 MGP_NODShiLtJ_G0005208.1 mouse_genomes_project 11 97118317 97123432 + lincRNA lincRNA MGP_NODShiLtJ_T0006246.1 MGP_NODShiLtJ_G0005208.1 mouse_genomes_project 11 97118476 97135268 + lincRNA lincRNA MGP_NODShiLtJ_T0006247.1 MGP_NODShiLtJ_G0005208.1 mouse_genomes_project 11 97120161 97125005 + lincRNA lincRNA MGP_NODShiLtJ_T0003118.1 MGP_NODShiLtJ_G0002892.1 mouse_genomes_project 11 60190601 60193565 + Slc36a3os antisense antisense MGP_NODShiLtJ_T0030423.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82022223 82042779 - MGP_NODShiLtJ_P0030423 Srr protein_coding protein_coding MGP_NODShiLtJ_T0030424.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82022373 82042656 - Srr protein_coding processed_transcript MGP_NODShiLtJ_T0030425.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82022657 82042754 - MGP_NODShiLtJ_P0030425 Srr protein_coding protein_coding MGP_NODShiLtJ_T0030426.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82022663 82042929 - MGP_NODShiLtJ_P0030426 Srr protein_coding protein_coding MGP_NODShiLtJ_T0030427.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82022683 82042754 - MGP_NODShiLtJ_P0030427 Srr protein_coding protein_coding MGP_NODShiLtJ_T0030428.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82025433 82042663 - MGP_NODShiLtJ_P0030428 Srr protein_coding protein_coding MGP_NODShiLtJ_T0030429.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82026086 82042641 - MGP_NODShiLtJ_P0030429 Srr protein_coding protein_coding MGP_NODShiLtJ_T0030430.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82026231 82042684 - Srr protein_coding retained_intron MGP_NODShiLtJ_T0030431.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82026316 82042656 - Srr protein_coding retained_intron MGP_NODShiLtJ_T0030432.1 MGP_NODShiLtJ_G0018550.1 mouse_genomes_project 11 82026970 82042639 - MGP_NODShiLtJ_P0030432 Srr protein_coding protein_coding MGP_NODShiLtJ_T0012560.1 MGP_NODShiLtJ_G0010668.1 mouse_genomes_project 11 86024301 86024583 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006232.1 MGP_NODShiLtJ_G0005199.1 mouse_genomes_project 11 91716932 91749177 - Gm12576 lincRNA lincRNA MGP_NODShiLtJ_T0031854.1 MGP_NODShiLtJ_G0018899.1 mouse_genomes_project 11 107733454 107753862 - MGP_NODShiLtJ_P0031854 Stac2 protein_coding protein_coding MGP_NODShiLtJ_T0031855.1 MGP_NODShiLtJ_G0018899.1 mouse_genomes_project 11 107736929 107741441 - MGP_NODShiLtJ_P0031855 Stac2 protein_coding protein_coding MGP_NODShiLtJ_T0028987.1 MGP_NODShiLtJ_G0018193.1 mouse_genomes_project 11 63092356 63096468 - MGP_NODShiLtJ_P0028987 Hand1 protein_coding protein_coding MGP_NODShiLtJ_T0028988.1 MGP_NODShiLtJ_G0018193.1 mouse_genomes_project 11 63092358 63095805 - MGP_NODShiLtJ_P0028988 Hand1 protein_coding protein_coding MGP_NODShiLtJ_T0028989.1 MGP_NODShiLtJ_G0018193.1 mouse_genomes_project 11 63095350 63096468 - MGP_NODShiLtJ_P0028989 Hand1 protein_coding protein_coding MGP_NODShiLtJ_T0028884.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59265273 59327340 + MGP_NODShiLtJ_P0028884 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028885.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59265480 59324066 + MGP_NODShiLtJ_P0028885 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028886.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59265497 59287144 + MGP_NODShiLtJ_P0028886 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028887.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59265677 59324070 + MGP_NODShiLtJ_P0028887 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028888.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59265677 59327336 + MGP_NODShiLtJ_P0028888 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028889.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59275147 59286591 + MGP_NODShiLtJ_P0028889 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028890.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59276394 59323728 + MGP_NODShiLtJ_P0028890 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028891.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59276434 59324066 + MGP_NODShiLtJ_P0028891 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028892.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59276434 59324066 + MGP_NODShiLtJ_P0028892 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028893.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59276486 59299446 + MGP_NODShiLtJ_P0028893 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028894.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59276486 59301022 + MGP_NODShiLtJ_P0028894 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028895.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59281338 59324032 + MGP_NODShiLtJ_P0028895 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028896.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59281634 59300788 + MGP_NODShiLtJ_P0028896 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0028897.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59297210 59324070 + Acsl6 protein_coding processed_transcript MGP_NODShiLtJ_T0028898.1 MGP_NODShiLtJ_G0018167.1 mouse_genomes_project 11 59307613 59324059 + MGP_NODShiLtJ_P0028898 Acsl6 protein_coding protein_coding MGP_NODShiLtJ_T0031014.1 MGP_NODShiLtJ_G0018689.1 mouse_genomes_project 11 90931945 90937767 + MGP_NODShiLtJ_P0031014 Slfn1 protein_coding protein_coding MGP_NODShiLtJ_T0099938.1 MGP_NODShiLtJ_G0038332.1 mouse_genomes_project 11 77811661 77811946 - snoRNA snoRNA MGP_NODShiLtJ_T0033457.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128244802 128268429 - Prpsap1 protein_coding processed_transcript MGP_NODShiLtJ_T0033458.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128244802 128268463 - MGP_NODShiLtJ_P0033458 Prpsap1 protein_coding protein_coding MGP_NODShiLtJ_T0033459.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128245256 128252265 - Prpsap1 protein_coding processed_transcript MGP_NODShiLtJ_T0033460.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128245333 128247201 - Prpsap1 protein_coding processed_transcript MGP_NODShiLtJ_T0033461.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128245357 128251684 - Prpsap1 protein_coding processed_transcript MGP_NODShiLtJ_T0033462.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128252004 128272310 - MGP_NODShiLtJ_P0033462 Prpsap1 protein_coding protein_coding MGP_NODShiLtJ_T0033463.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128252236 128268404 - Prpsap1 protein_coding processed_transcript MGP_NODShiLtJ_T0033464.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128252478 128268450 - MGP_NODShiLtJ_P0033464 Prpsap1 protein_coding protein_coding MGP_NODShiLtJ_T0033465.1 MGP_NODShiLtJ_G0019286.1 mouse_genomes_project 11 128261059 128268442 - Prpsap1 protein_coding processed_transcript MGP_NODShiLtJ_T0030072.1 MGP_NODShiLtJ_G0018452.1 mouse_genomes_project 11 77172472 77176784 - MGP_NODShiLtJ_P0030072 Chrne protein_coding protein_coding MGP_NODShiLtJ_T0030073.1 MGP_NODShiLtJ_G0018452.1 mouse_genomes_project 11 77172472 77176806 - MGP_NODShiLtJ_P0030073 Chrne protein_coding protein_coding MGP_NODShiLtJ_T0030074.1 MGP_NODShiLtJ_G0018452.1 mouse_genomes_project 11 77172474 77173263 - Chrne protein_coding retained_intron MGP_NODShiLtJ_T0030075.1 MGP_NODShiLtJ_G0018452.1 mouse_genomes_project 11 77172482 77173287 - Chrne protein_coding retained_intron MGP_NODShiLtJ_T0031525.1 MGP_NODShiLtJ_G0018815.1 mouse_genomes_project 11 103928271 103934554 + MGP_NODShiLtJ_P0031525 Mrpl27 protein_coding protein_coding MGP_NODShiLtJ_T0031526.1 MGP_NODShiLtJ_G0018815.1 mouse_genomes_project 11 103928280 103934383 + Mrpl27 protein_coding processed_transcript MGP_NODShiLtJ_T0031527.1 MGP_NODShiLtJ_G0018815.1 mouse_genomes_project 11 103928515 103934086 + Mrpl27 protein_coding processed_transcript MGP_NODShiLtJ_T0031528.1 MGP_NODShiLtJ_G0018815.1 mouse_genomes_project 11 103928535 103934182 + Mrpl27 protein_coding processed_transcript MGP_NODShiLtJ_T0029245.1 MGP_NODShiLtJ_G0018276.1 mouse_genomes_project 11 66405437 66408982 + MGP_NODShiLtJ_P0029245 Smcr8 protein_coding protein_coding MGP_NODShiLtJ_T0029246.1 MGP_NODShiLtJ_G0018276.1 mouse_genomes_project 11 66405438 66417361 + MGP_NODShiLtJ_P0029246 Smcr8 protein_coding protein_coding MGP_NODShiLtJ_T0012480.1 MGP_NODShiLtJ_G0010588.1 mouse_genomes_project 11 57246088 57246241 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012407.1 MGP_NODShiLtJ_G0010515.1 mouse_genomes_project 11 24117945 24118204 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012383.1 MGP_NODShiLtJ_G0010491.1 mouse_genomes_project 11 18801805 18801949 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033029.1 MGP_NODShiLtJ_G0019197.1 mouse_genomes_project 11 121187063 121278646 - MGP_NODShiLtJ_P0033029 Abca6 protein_coding protein_coding MGP_NODShiLtJ_T0033030.1 MGP_NODShiLtJ_G0019197.1 mouse_genomes_project 11 121262733 121280017 - Abca6 protein_coding processed_transcript MGP_NODShiLtJ_T0006167.1 MGP_NODShiLtJ_G0005148.1 mouse_genomes_project 11 49300448 49316782 - lincRNA lincRNA MGP_NODShiLtJ_T0029729.1 MGP_NODShiLtJ_G0018379.1 mouse_genomes_project 11 75764279 75773225 - protein_coding processed_transcript MGP_NODShiLtJ_T0029730.1 MGP_NODShiLtJ_G0018379.1 mouse_genomes_project 11 75765616 75772927 - MGP_NODShiLtJ_P0029730 protein_coding protein_coding MGP_NODShiLtJ_T0029731.1 MGP_NODShiLtJ_G0018379.1 mouse_genomes_project 11 75765969 75772927 - MGP_NODShiLtJ_P0029731 protein_coding protein_coding MGP_NODShiLtJ_T0003203.1 MGP_NODShiLtJ_G0002961.1 mouse_genomes_project 11 96355058 96398076 - Gm11508 antisense antisense MGP_NODShiLtJ_T0012506.1 MGP_NODShiLtJ_G0010614.1 mouse_genomes_project 11 64986318 64987800 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028138.1 MGP_NODShiLtJ_G0017965.1 mouse_genomes_project 11 30932688 30933514 - Rps27a protein_coding processed_transcript MGP_NODShiLtJ_T0028139.1 MGP_NODShiLtJ_G0017965.1 mouse_genomes_project 11 30932688 30934952 - MGP_NODShiLtJ_P0028139 Rps27a protein_coding protein_coding MGP_NODShiLtJ_T0028140.1 MGP_NODShiLtJ_G0017965.1 mouse_genomes_project 11 30932688 30934703 - MGP_NODShiLtJ_P0028140 Rps27a protein_coding protein_coding MGP_NODShiLtJ_T0028141.1 MGP_NODShiLtJ_G0017965.1 mouse_genomes_project 11 30932741 30934725 - Rps27a protein_coding processed_transcript MGP_NODShiLtJ_T0028142.1 MGP_NODShiLtJ_G0017965.1 mouse_genomes_project 11 30933958 30934734 - Rps27a protein_coding processed_transcript MGP_NODShiLtJ_T0028486.1 MGP_NODShiLtJ_G0018058.1 mouse_genomes_project 11 52982544 52988252 + Rack1 protein_coding retained_intron MGP_NODShiLtJ_T0028487.1 MGP_NODShiLtJ_G0018058.1 mouse_genomes_project 11 52982569 52989366 + Rack1 protein_coding processed_transcript MGP_NODShiLtJ_T0028488.1 MGP_NODShiLtJ_G0018058.1 mouse_genomes_project 11 52982572 52989712 + MGP_NODShiLtJ_P0028488 Rack1 protein_coding protein_coding MGP_NODShiLtJ_T0028489.1 MGP_NODShiLtJ_G0018058.1 mouse_genomes_project 11 52982586 52984880 + Rack1 protein_coding retained_intron MGP_NODShiLtJ_T0028490.1 MGP_NODShiLtJ_G0018058.1 mouse_genomes_project 11 52985364 52989351 + Rack1 protein_coding processed_transcript MGP_NODShiLtJ_T0028491.1 MGP_NODShiLtJ_G0018058.1 mouse_genomes_project 11 52988725 52989371 + Rack1 protein_coding processed_transcript MGP_NODShiLtJ_T0030392.1 MGP_NODShiLtJ_G0018543.1 mouse_genomes_project 11 81716460 81740739 + MGP_NODShiLtJ_P0030392 Ccdc92b protein_coding protein_coding MGP_NODShiLtJ_T0098734.1 MGP_NODShiLtJ_G0037128.1 mouse_genomes_project 11 117438443 117438550 - Gm25889 snRNA snRNA MGP_NODShiLtJ_T0033494.1 MGP_NODShiLtJ_G0019291.1 mouse_genomes_project 11 128435065 128443888 - MGP_NODShiLtJ_P0033494 Cygb protein_coding protein_coding MGP_NODShiLtJ_T0029334.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67196547 67259776 - MGP_NODShiLtJ_P0029334 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029335.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67196547 67259792 - MGP_NODShiLtJ_P0029335 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029336.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67196547 67259792 - MGP_NODShiLtJ_P0029336 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029337.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67196547 67259776 - MGP_NODShiLtJ_P0029337 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029338.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67196548 67259794 - MGP_NODShiLtJ_P0029338 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029339.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67196548 67259794 - MGP_NODShiLtJ_P0029339 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029340.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67202465 67225649 - MGP_NODShiLtJ_P0029340 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029341.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67211962 67223586 - MGP_NODShiLtJ_P0029341 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029342.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67213688 67225818 - Epn2 protein_coding retained_intron MGP_NODShiLtJ_T0029343.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67225781 67259765 - MGP_NODShiLtJ_P0029343 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029344.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67225967 67259765 - MGP_NODShiLtJ_P0029344 Epn2 protein_coding protein_coding MGP_NODShiLtJ_T0029345.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67226024 67259769 - Epn2 protein_coding processed_transcript MGP_NODShiLtJ_T0029346.1 MGP_NODShiLtJ_G0018293.1 mouse_genomes_project 11 67233977 67259777 - Epn2 protein_coding processed_transcript MGP_NODShiLtJ_T0011193.1 MGP_NODShiLtJ_G0009326.1 mouse_genomes_project 11 73584368 73584681 + Gm26476 misc_RNA misc_RNA MGP_NODShiLtJ_T0033596.1 MGP_NODShiLtJ_G0019311.1 mouse_genomes_project 11 129738145 129749320 - MGP_NODShiLtJ_P0033596 Tk1 protein_coding protein_coding MGP_NODShiLtJ_T0033597.1 MGP_NODShiLtJ_G0019311.1 mouse_genomes_project 11 129738243 129739883 - Tk1 protein_coding retained_intron MGP_NODShiLtJ_T0033598.1 MGP_NODShiLtJ_G0019311.1 mouse_genomes_project 11 129744868 129749065 - Tk1 protein_coding retained_intron MGP_NODShiLtJ_T0033599.1 MGP_NODShiLtJ_G0019311.1 mouse_genomes_project 11 129744946 129749095 - Tk1 protein_coding retained_intron MGP_NODShiLtJ_T0033600.1 MGP_NODShiLtJ_G0019311.1 mouse_genomes_project 11 129745686 129749075 - Tk1 protein_coding retained_intron MGP_NODShiLtJ_T0033601.1 MGP_NODShiLtJ_G0019311.1 mouse_genomes_project 11 129748062 129749045 - Tk1 protein_coding retained_intron MGP_NODShiLtJ_T0012426.1 MGP_NODShiLtJ_G0010534.1 mouse_genomes_project 11 32055370 32056320 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033816.1 MGP_NODShiLtJ_G0019355.1 mouse_genomes_project 11 132489399 132561840 - MGP_NODShiLtJ_P0033816 Nploc4 protein_coding protein_coding MGP_NODShiLtJ_T0033817.1 MGP_NODShiLtJ_G0019355.1 mouse_genomes_project 11 132489399 132561840 - MGP_NODShiLtJ_P0033817 Nploc4 protein_coding protein_coding MGP_NODShiLtJ_T0033818.1 MGP_NODShiLtJ_G0019355.1 mouse_genomes_project 11 132491347 132492533 - Nploc4 protein_coding processed_transcript MGP_NODShiLtJ_T0033819.1 MGP_NODShiLtJ_G0019355.1 mouse_genomes_project 11 132514781 132541638 - Nploc4 protein_coding processed_transcript MGP_NODShiLtJ_T0033820.1 MGP_NODShiLtJ_G0019355.1 mouse_genomes_project 11 132524549 132534812 - Nploc4 protein_coding processed_transcript MGP_NODShiLtJ_T0012630.1 MGP_NODShiLtJ_G0010738.1 mouse_genomes_project 11 113909854 113910718 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033736.1 MGP_NODShiLtJ_G0019341.1 mouse_genomes_project 11 131595229 131604264 - MGP_NODShiLtJ_P0033736 Nptx1 protein_coding protein_coding MGP_NODShiLtJ_T0003088.1 MGP_NODShiLtJ_G0002863.1 mouse_genomes_project 11 31562070 31563796 + Gm29237 antisense antisense MGP_NODShiLtJ_T0028402.1 MGP_NODShiLtJ_G0018033.1 mouse_genomes_project 11 47495406 47513994 - MGP_NODShiLtJ_P0028402 Ttc1 protein_coding protein_coding MGP_NODShiLtJ_T0028403.1 MGP_NODShiLtJ_G0018033.1 mouse_genomes_project 11 47495903 47513968 - MGP_NODShiLtJ_P0028403 Ttc1 protein_coding protein_coding MGP_NODShiLtJ_T0028404.1 MGP_NODShiLtJ_G0018033.1 mouse_genomes_project 11 47510903 47513978 - Ttc1 protein_coding processed_transcript MGP_NODShiLtJ_T0006115.1 MGP_NODShiLtJ_G0005103.1 mouse_genomes_project 11 18157748 18161922 - Gm28401 lincRNA lincRNA MGP_NODShiLtJ_T0006116.1 MGP_NODShiLtJ_G0005103.1 mouse_genomes_project 11 18157843 18161941 - Gm28401 lincRNA lincRNA MGP_NODShiLtJ_T0003205.1 MGP_NODShiLtJ_G0002963.1 mouse_genomes_project 11 97273189 97303348 + 4930556N13Rik antisense antisense MGP_NODShiLtJ_T0029328.1 MGP_NODShiLtJ_G0018292.1 mouse_genomes_project 11 67184507 67192270 + MGP_NODShiLtJ_P0029328 B9d1 protein_coding protein_coding MGP_NODShiLtJ_T0029329.1 MGP_NODShiLtJ_G0018292.1 mouse_genomes_project 11 67184566 67192270 + B9d1 protein_coding processed_transcript MGP_NODShiLtJ_T0029330.1 MGP_NODShiLtJ_G0018292.1 mouse_genomes_project 11 67184615 67187792 + B9d1 protein_coding processed_transcript MGP_NODShiLtJ_T0029331.1 MGP_NODShiLtJ_G0018292.1 mouse_genomes_project 11 67184618 67192270 + B9d1 protein_coding processed_transcript MGP_NODShiLtJ_T0029332.1 MGP_NODShiLtJ_G0018292.1 mouse_genomes_project 11 67188479 67192270 + MGP_NODShiLtJ_P0029332 B9d1 protein_coding protein_coding MGP_NODShiLtJ_T0029333.1 MGP_NODShiLtJ_G0018292.1 mouse_genomes_project 11 67191653 67192270 + B9d1 protein_coding processed_transcript MGP_NODShiLtJ_T0097900.1 MGP_NODShiLtJ_G0036312.1 mouse_genomes_project 11 98702591 98702710 - n-R5s72 rRNA rRNA MGP_NODShiLtJ_T0027682.1 MGP_NODShiLtJ_G0017860.1 mouse_genomes_project 11 2661874 2803876 + MGP_NODShiLtJ_P0027682 Ankrd36 protein_coding protein_coding MGP_NODShiLtJ_T0027683.1 MGP_NODShiLtJ_G0017860.1 mouse_genomes_project 11 2661887 2676491 + MGP_NODShiLtJ_P0027683 Ankrd36 protein_coding protein_coding MGP_NODShiLtJ_T0027684.1 MGP_NODShiLtJ_G0017860.1 mouse_genomes_project 11 2662007 2766386 + MGP_NODShiLtJ_P0027684 Ankrd36 protein_coding protein_coding MGP_NODShiLtJ_T0027685.1 MGP_NODShiLtJ_G0017860.1 mouse_genomes_project 11 2666289 2676341 + Ankrd36 protein_coding processed_transcript MGP_NODShiLtJ_T0027686.1 MGP_NODShiLtJ_G0017860.1 mouse_genomes_project 11 2731123 2749329 + MGP_NODShiLtJ_P0027686 Ankrd36 protein_coding protein_coding MGP_NODShiLtJ_T0028229.1 MGP_NODShiLtJ_G0017986.1 mouse_genomes_project 11 33921203 33926721 + MGP_NODShiLtJ_P0028229 Mpg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028230.1 MGP_NODShiLtJ_G0017986.1 mouse_genomes_project 11 33921209 33927399 + MGP_NODShiLtJ_P0028230 Mpg protein_coding protein_coding MGP_NODShiLtJ_T0028231.1 MGP_NODShiLtJ_G0017986.1 mouse_genomes_project 11 33921228 33923096 + Mpg protein_coding retained_intron MGP_NODShiLtJ_T0028232.1 MGP_NODShiLtJ_G0017986.1 mouse_genomes_project 11 33921237 33925943 + MGP_NODShiLtJ_P0028232 Mpg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006272.1 MGP_NODShiLtJ_G0005226.1 mouse_genomes_project 11 112878526 112880181 - Gm11636 lincRNA lincRNA MGP_NODShiLtJ_T0031085.1 MGP_NODShiLtJ_G0018714.1 mouse_genomes_project 11 91955969 91981440 - MGP_NODShiLtJ_P0031085 Dusp14 protein_coding protein_coding MGP_NODShiLtJ_T0031086.1 MGP_NODShiLtJ_G0018714.1 mouse_genomes_project 11 91955969 91980996 - MGP_NODShiLtJ_P0031086 Dusp14 protein_coding protein_coding MGP_NODShiLtJ_T0031087.1 MGP_NODShiLtJ_G0018714.1 mouse_genomes_project 11 91955973 91981218 - MGP_NODShiLtJ_P0031087 Dusp14 protein_coding protein_coding MGP_NODShiLtJ_T0031088.1 MGP_NODShiLtJ_G0018714.1 mouse_genomes_project 11 91956342 91979719 - MGP_NODShiLtJ_P0031088 Dusp14 protein_coding protein_coding MGP_NODShiLtJ_T0031089.1 MGP_NODShiLtJ_G0018714.1 mouse_genomes_project 11 91956908 91981900 - MGP_NODShiLtJ_P0031089 Dusp14 protein_coding protein_coding MGP_NODShiLtJ_T0030951.1 MGP_NODShiLtJ_G0018668.1 mouse_genomes_project 11 89535443 89544075 + 5530401A14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0030952.1 MGP_NODShiLtJ_G0018668.1 mouse_genomes_project 11 89535449 89576552 + MGP_NODShiLtJ_P0030952 5530401A14Rik protein_coding protein_coding MGP_NODShiLtJ_T0034026.1 MGP_NODShiLtJ_G0019397.1 mouse_genomes_project 11 133375237 133402793 - MGP_NODShiLtJ_P0034026 Ogfod3 protein_coding protein_coding MGP_NODShiLtJ_T0031787.1 MGP_NODShiLtJ_G0018884.1 mouse_genomes_project 11 107268323 107270640 - MGP_NODShiLtJ_P0031787 E130012A19Rik protein_coding protein_coding MGP_NODShiLtJ_T0029590.1 MGP_NODShiLtJ_G0018352.1 mouse_genomes_project 11 74896843 74908998 + MGP_NODShiLtJ_P0029590 Ccdc42 protein_coding protein_coding MGP_NODShiLtJ_T0029591.1 MGP_NODShiLtJ_G0018352.1 mouse_genomes_project 11 74896955 74908977 + MGP_NODShiLtJ_P0029591 Ccdc42 protein_coding protein_coding MGP_NODShiLtJ_T0029592.1 MGP_NODShiLtJ_G0018352.1 mouse_genomes_project 11 74903873 74908986 + MGP_NODShiLtJ_P0029592 Ccdc42 protein_coding protein_coding MGP_NODShiLtJ_T0012490.1 MGP_NODShiLtJ_G0010598.1 mouse_genomes_project 11 59359499 59359797 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027421.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 33882 75087 + MGP_NODShiLtJ_P0027421 Eif4enif1 protein_coding protein_coding MGP_NODShiLtJ_T0027422.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 34178 53266 + Eif4enif1 protein_coding retained_intron MGP_NODShiLtJ_T0027423.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 34178 75094 + MGP_NODShiLtJ_P0027423 Eif4enif1 protein_coding protein_coding MGP_NODShiLtJ_T0027424.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 34204 44958 + Eif4enif1 protein_coding retained_intron MGP_NODShiLtJ_T0027425.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 34249 51819 + MGP_NODShiLtJ_P0027425 Eif4enif1 protein_coding protein_coding MGP_NODShiLtJ_T0027426.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 34510 75091 + MGP_NODShiLtJ_P0027426 Eif4enif1 protein_coding protein_coding MGP_NODShiLtJ_T0027427.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 34536 75093 + MGP_NODShiLtJ_P0027427 Eif4enif1 protein_coding protein_coding MGP_NODShiLtJ_T0027428.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 35145 75092 + MGP_NODShiLtJ_P0027428 Eif4enif1 protein_coding protein_coding MGP_NODShiLtJ_T0027429.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 58690 60757 + Eif4enif1 protein_coding retained_intron MGP_NODShiLtJ_T0027430.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 58690 60720 + Eif4enif1 protein_coding retained_intron MGP_NODShiLtJ_T0027431.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 58736 69966 + MGP_NODShiLtJ_P0027431 Eif4enif1 protein_coding protein_coding MGP_NODShiLtJ_T0027432.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 64821 71482 + Eif4enif1 protein_coding retained_intron MGP_NODShiLtJ_T0027433.1 MGP_NODShiLtJ_G0017809.1 mouse_genomes_project 11 66147 69948 + Eif4enif1 protein_coding retained_intron MGP_NODShiLtJ_T0031891.1 MGP_NODShiLtJ_G0018908.1 mouse_genomes_project 11 108121067 108126790 - Pgap3 protein_coding processed_transcript MGP_NODShiLtJ_T0031892.1 MGP_NODShiLtJ_G0018908.1 mouse_genomes_project 11 108121067 108135195 - MGP_NODShiLtJ_P0031892 Pgap3 protein_coding protein_coding MGP_NODShiLtJ_T0031893.1 MGP_NODShiLtJ_G0018908.1 mouse_genomes_project 11 108122014 108135140 - MGP_NODShiLtJ_P0031893 Pgap3 protein_coding protein_coding MGP_NODShiLtJ_T0031894.1 MGP_NODShiLtJ_G0018908.1 mouse_genomes_project 11 108123277 108135161 - MGP_NODShiLtJ_P0031894 Pgap3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031895.1 MGP_NODShiLtJ_G0018908.1 mouse_genomes_project 11 108126039 108135119 - Pgap3 protein_coding processed_transcript MGP_NODShiLtJ_T0031896.1 MGP_NODShiLtJ_G0018908.1 mouse_genomes_project 11 108133275 108135142 - Pgap3 protein_coding processed_transcript MGP_NODShiLtJ_T0003107.1 MGP_NODShiLtJ_G0002882.1 mouse_genomes_project 11 56751101 56751696 - Gm12205 antisense antisense MGP_NODShiLtJ_T0031933.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108467747 108492686 - Med24 protein_coding retained_intron MGP_NODShiLtJ_T0031934.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108467747 108493287 - MGP_NODShiLtJ_P0031934 Med24 protein_coding protein_coding MGP_NODShiLtJ_T0031935.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108467999 108469637 - Med24 protein_coding retained_intron MGP_NODShiLtJ_T0031936.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108468056 108493262 - MGP_NODShiLtJ_P0031936 Med24 protein_coding protein_coding MGP_NODShiLtJ_T0031937.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108468056 108493219 - MGP_NODShiLtJ_P0031937 Med24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031938.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108469583 108470408 - Med24 protein_coding retained_intron MGP_NODShiLtJ_T0031939.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108470422 108471160 - Med24 protein_coding processed_transcript MGP_NODShiLtJ_T0031940.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108471998 108493270 - Med24 protein_coding retained_intron MGP_NODShiLtJ_T0031941.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108472802 108474223 - Med24 protein_coding retained_intron MGP_NODShiLtJ_T0031942.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108481066 108481967 - Med24 protein_coding processed_transcript MGP_NODShiLtJ_T0031943.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108481707 108493226 - MGP_NODShiLtJ_P0031943 Med24 protein_coding protein_coding MGP_NODShiLtJ_T0031944.1 MGP_NODShiLtJ_G0018920.1 mouse_genomes_project 11 108481794 108493255 - Med24 protein_coding retained_intron MGP_NODShiLtJ_T0034017.1 MGP_NODShiLtJ_G0019393.1 mouse_genomes_project 11 133249920 133259888 - MGP_NODShiLtJ_P0034017 Sectm1a protein_coding protein_coding MGP_NODShiLtJ_T0034018.1 MGP_NODShiLtJ_G0019393.1 mouse_genomes_project 11 133249920 133259807 - MGP_NODShiLtJ_P0034018 Sectm1a protein_coding protein_coding MGP_NODShiLtJ_T0034019.1 MGP_NODShiLtJ_G0019393.1 mouse_genomes_project 11 133250430 133259804 - MGP_NODShiLtJ_P0034019 Sectm1a protein_coding protein_coding MGP_NODShiLtJ_T0034020.1 MGP_NODShiLtJ_G0019393.1 mouse_genomes_project 11 133250448 133259798 - MGP_NODShiLtJ_P0034020 Sectm1a protein_coding protein_coding MGP_NODShiLtJ_T0034021.1 MGP_NODShiLtJ_G0019393.1 mouse_genomes_project 11 133251549 133259793 - Sectm1a protein_coding processed_transcript MGP_NODShiLtJ_T0028439.1 MGP_NODShiLtJ_G0018042.1 mouse_genomes_project 11 49911812 49952129 + MGP_NODShiLtJ_P0028439 Sox30 protein_coding protein_coding MGP_NODShiLtJ_T0029107.1 MGP_NODShiLtJ_G0018246.1 mouse_genomes_project 11 64806756 64834675 + MGP_NODShiLtJ_P0029107 Wnt9a protein_coding protein_coding MGP_NODShiLtJ_T0029108.1 MGP_NODShiLtJ_G0018246.1 mouse_genomes_project 11 64806758 64834675 + MGP_NODShiLtJ_P0029108 Wnt9a protein_coding protein_coding MGP_NODShiLtJ_T0027854.1 MGP_NODShiLtJ_G0017903.1 mouse_genomes_project 11 9788108 9809460 - Fignl1 protein_coding processed_transcript MGP_NODShiLtJ_T0027855.1 MGP_NODShiLtJ_G0017903.1 mouse_genomes_project 11 9788120 9802023 - Fignl1 protein_coding processed_transcript MGP_NODShiLtJ_T0027856.1 MGP_NODShiLtJ_G0017903.1 mouse_genomes_project 11 9800849 9809497 - MGP_NODShiLtJ_P0027856 Fignl1 protein_coding protein_coding MGP_NODShiLtJ_T0027857.1 MGP_NODShiLtJ_G0017903.1 mouse_genomes_project 11 9800849 9809497 - MGP_NODShiLtJ_P0027857 Fignl1 protein_coding protein_coding MGP_NODShiLtJ_T0027858.1 MGP_NODShiLtJ_G0017903.1 mouse_genomes_project 11 9800849 9809494 - MGP_NODShiLtJ_P0027858 Fignl1 protein_coding protein_coding MGP_NODShiLtJ_T0027859.1 MGP_NODShiLtJ_G0017903.1 mouse_genomes_project 11 9801113 9809467 - MGP_NODShiLtJ_P0027859 Fignl1 protein_coding protein_coding MGP_NODShiLtJ_T0027860.1 MGP_NODShiLtJ_G0017903.1 mouse_genomes_project 11 9803258 9809483 - MGP_NODShiLtJ_P0027860 Fignl1 protein_coding protein_coding MGP_NODShiLtJ_T0012563.1 MGP_NODShiLtJ_G0010671.1 mouse_genomes_project 11 86713910 86714358 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009631.1 MGP_NODShiLtJ_G0007764.1 mouse_genomes_project 11 87246964 87247076 + Mir365-2 miRNA miRNA MGP_NODShiLtJ_T0012382.1 MGP_NODShiLtJ_G0010490.1 mouse_genomes_project 11 17980591 17981837 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027434.1 MGP_NODShiLtJ_G0017810.1 mouse_genomes_project 11 97659 114052 - MGP_NODShiLtJ_P0027434 Drg1 protein_coding protein_coding MGP_NODShiLtJ_T0027435.1 MGP_NODShiLtJ_G0017810.1 mouse_genomes_project 11 97849 100601 - Drg1 protein_coding retained_intron MGP_NODShiLtJ_T0027436.1 MGP_NODShiLtJ_G0017810.1 mouse_genomes_project 11 102152 110183 - Drg1 protein_coding retained_intron MGP_NODShiLtJ_T0027437.1 MGP_NODShiLtJ_G0017810.1 mouse_genomes_project 11 104173 114051 - Drg1 protein_coding processed_transcript MGP_NODShiLtJ_T0027438.1 MGP_NODShiLtJ_G0017810.1 mouse_genomes_project 11 105376 114074 - Drg1 protein_coding retained_intron MGP_NODShiLtJ_T0027439.1 MGP_NODShiLtJ_G0017810.1 mouse_genomes_project 11 106973 114052 - MGP_NODShiLtJ_P0027439 Drg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030570.1 MGP_NODShiLtJ_G0018581.1 mouse_genomes_project 11 83477347 83631533 - MGP_NODShiLtJ_P0030570 Nxn protein_coding protein_coding MGP_NODShiLtJ_T0030571.1 MGP_NODShiLtJ_G0018581.1 mouse_genomes_project 11 83589790 83631461 - Nxn protein_coding processed_transcript MGP_NODShiLtJ_T0012493.1 MGP_NODShiLtJ_G0010601.1 mouse_genomes_project 11 60175937 60176180 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030873.1 MGP_NODShiLtJ_G0018650.1 mouse_genomes_project 11 87097046 87215792 + MGP_NODShiLtJ_P0030873 Rab11fip4 protein_coding protein_coding MGP_NODShiLtJ_T0030874.1 MGP_NODShiLtJ_G0018650.1 mouse_genomes_project 11 87173867 87198186 + MGP_NODShiLtJ_P0030874 Rab11fip4 protein_coding protein_coding MGP_NODShiLtJ_T0099916.1 MGP_NODShiLtJ_G0038310.1 mouse_genomes_project 11 31305027 31305167 + Gm22588 snoRNA snoRNA MGP_NODShiLtJ_T0006259.1 MGP_NODShiLtJ_G0005218.1 mouse_genomes_project 11 105324766 105325779 - Gm11527 lincRNA lincRNA MGP_NODShiLtJ_T0027960.1 MGP_NODShiLtJ_G0017927.1 mouse_genomes_project 11 20770802 20826483 + Peli1 protein_coding retained_intron MGP_NODShiLtJ_T0027961.1 MGP_NODShiLtJ_G0017927.1 mouse_genomes_project 11 20770802 20834588 + MGP_NODShiLtJ_P0027961 Peli1 protein_coding protein_coding MGP_NODShiLtJ_T0027962.1 MGP_NODShiLtJ_G0017927.1 mouse_genomes_project 11 20771629 20833017 + Peli1 protein_coding retained_intron MGP_NODShiLtJ_T0027963.1 MGP_NODShiLtJ_G0017927.1 mouse_genomes_project 11 20819769 20834588 + MGP_NODShiLtJ_P0027963 Peli1 protein_coding protein_coding MGP_NODShiLtJ_T0032018.1 MGP_NODShiLtJ_G0018940.1 mouse_genomes_project 11 109214203 109224045 - MGP_NODShiLtJ_P0032018 Krt28 protein_coding protein_coding MGP_NODShiLtJ_T0033828.1 MGP_NODShiLtJ_G0019359.1 mouse_genomes_project 11 132584154 132590194 + MGP_NODShiLtJ_P0033828 Ccdc137 protein_coding protein_coding MGP_NODShiLtJ_T0033829.1 MGP_NODShiLtJ_G0019359.1 mouse_genomes_project 11 132584165 132585409 + Ccdc137 protein_coding processed_transcript MGP_NODShiLtJ_T0033830.1 MGP_NODShiLtJ_G0019359.1 mouse_genomes_project 11 132584177 132584885 + Ccdc137 protein_coding retained_intron MGP_NODShiLtJ_T0033831.1 MGP_NODShiLtJ_G0019359.1 mouse_genomes_project 11 132584181 132586151 + MGP_NODShiLtJ_P0033831 Ccdc137 protein_coding protein_coding MGP_NODShiLtJ_T0033832.1 MGP_NODShiLtJ_G0019359.1 mouse_genomes_project 11 132584186 132588252 + MGP_NODShiLtJ_P0033832 Ccdc137 protein_coding protein_coding MGP_NODShiLtJ_T0033833.1 MGP_NODShiLtJ_G0019359.1 mouse_genomes_project 11 132584225 132586044 + Ccdc137 protein_coding processed_transcript MGP_NODShiLtJ_T0033834.1 MGP_NODShiLtJ_G0019359.1 mouse_genomes_project 11 132585840 132588368 + Ccdc137 protein_coding retained_intron MGP_NODShiLtJ_T0033835.1 MGP_NODShiLtJ_G0019359.1 mouse_genomes_project 11 132588301 132590193 + Ccdc137 protein_coding processed_transcript MGP_NODShiLtJ_T0030742.1 MGP_NODShiLtJ_G0018615.1 mouse_genomes_project 11 85618274 85620420 - Rpl23a protein_coding retained_intron MGP_NODShiLtJ_T0030743.1 MGP_NODShiLtJ_G0018615.1 mouse_genomes_project 11 85618277 85618973 - Rpl23a protein_coding retained_intron MGP_NODShiLtJ_T0030744.1 MGP_NODShiLtJ_G0018615.1 mouse_genomes_project 11 85618277 85620927 - MGP_NODShiLtJ_P0030744 Rpl23a protein_coding protein_coding MGP_NODShiLtJ_T0009645.1 MGP_NODShiLtJ_G0007778.1 mouse_genomes_project 11 106429503 106429576 + Mir152 miRNA miRNA MGP_NODShiLtJ_T0027766.1 MGP_NODShiLtJ_G0017880.1 mouse_genomes_project 11 3600845 3618963 - MGP_NODShiLtJ_P0027766 H2afv protein_coding protein_coding MGP_NODShiLtJ_T0027767.1 MGP_NODShiLtJ_G0017880.1 mouse_genomes_project 11 3601754 3618872 - MGP_NODShiLtJ_P0027767 H2afv protein_coding protein_coding MGP_NODShiLtJ_T0032738.1 MGP_NODShiLtJ_G0019131.1 mouse_genomes_project 11 115023370 115083993 + MGP_NODShiLtJ_P0032738 Itgb3 protein_coding protein_coding MGP_NODShiLtJ_T0032739.1 MGP_NODShiLtJ_G0019131.1 mouse_genomes_project 11 115056072 115083337 + Itgb3 protein_coding processed_transcript MGP_NODShiLtJ_T0029472.1 MGP_NODShiLtJ_G0018319.1 mouse_genomes_project 11 69811116 69851893 - MGP_NODShiLtJ_P0029472 Hs3st3b1 protein_coding protein_coding MGP_NODShiLtJ_T0032842.1 MGP_NODShiLtJ_G0019159.1 mouse_genomes_project 11 116991412 117001250 + MGP_NODShiLtJ_P0032842 Prr29 protein_coding protein_coding MGP_NODShiLtJ_T0032843.1 MGP_NODShiLtJ_G0019159.1 mouse_genomes_project 11 116998980 117001694 + MGP_NODShiLtJ_P0032843 Prr29 protein_coding protein_coding MGP_NODShiLtJ_T0032844.1 MGP_NODShiLtJ_G0019159.1 mouse_genomes_project 11 116998980 117001484 + MGP_NODShiLtJ_P0032844 Prr29 protein_coding protein_coding MGP_NODShiLtJ_T0032845.1 MGP_NODShiLtJ_G0019159.1 mouse_genomes_project 11 116998993 117001239 + MGP_NODShiLtJ_P0032845 Prr29 protein_coding protein_coding MGP_NODShiLtJ_T0098730.1 MGP_NODShiLtJ_G0037124.1 mouse_genomes_project 11 112804842 112804946 - Gm25337 snRNA snRNA MGP_NODShiLtJ_T0006282.1 MGP_NODShiLtJ_G0005235.1 mouse_genomes_project 11 121606980 121609973 + Gm11682 lincRNA lincRNA MGP_NODShiLtJ_T0031243.1 MGP_NODShiLtJ_G0018748.1 mouse_genomes_project 11 95269185 95289961 - MGP_NODShiLtJ_P0031243 Prr11 protein_coding protein_coding MGP_NODShiLtJ_T0032623.1 MGP_NODShiLtJ_G0019107.1 mouse_genomes_project 11 113363428 113385296 - MGP_NODShiLtJ_P0032623 Plcd3 protein_coding protein_coding MGP_NODShiLtJ_T0032624.1 MGP_NODShiLtJ_G0019107.1 mouse_genomes_project 11 113363428 113371419 - MGP_NODShiLtJ_P0032624 Plcd3 protein_coding protein_coding MGP_NODShiLtJ_T0032625.1 MGP_NODShiLtJ_G0019107.1 mouse_genomes_project 11 113363709 113364875 - Plcd3 protein_coding processed_transcript MGP_NODShiLtJ_T0032626.1 MGP_NODShiLtJ_G0019107.1 mouse_genomes_project 11 113373679 113385256 - Plcd3 protein_coding processed_transcript MGP_NODShiLtJ_T0032627.1 MGP_NODShiLtJ_G0019107.1 mouse_genomes_project 11 113374854 113385229 - Plcd3 protein_coding processed_transcript MGP_NODShiLtJ_T0099922.1 MGP_NODShiLtJ_G0038316.1 mouse_genomes_project 11 52984244 52984325 + Snord96a snoRNA snoRNA MGP_NODShiLtJ_T0029584.1 MGP_NODShiLtJ_G0018350.1 mouse_genomes_project 11 74806478 74859128 + MGP_NODShiLtJ_P0029584 Pik3r6 protein_coding protein_coding MGP_NODShiLtJ_T0029585.1 MGP_NODShiLtJ_G0018350.1 mouse_genomes_project 11 74806478 74859128 + MGP_NODShiLtJ_P0029585 Pik3r6 protein_coding protein_coding MGP_NODShiLtJ_T0029586.1 MGP_NODShiLtJ_G0018350.1 mouse_genomes_project 11 74806550 74859128 + Pik3r6 protein_coding processed_transcript MGP_NODShiLtJ_T0029587.1 MGP_NODShiLtJ_G0018350.1 mouse_genomes_project 11 74841852 74849952 + Pik3r6 protein_coding processed_transcript MGP_NODShiLtJ_T0029588.1 MGP_NODShiLtJ_G0018350.1 mouse_genomes_project 11 74858503 74859126 + Pik3r6 protein_coding processed_transcript MGP_NODShiLtJ_T0098732.1 MGP_NODShiLtJ_G0037126.1 mouse_genomes_project 11 116804784 116804928 - Gm25556 snRNA snRNA MGP_NODShiLtJ_T0006316.1 MGP_NODShiLtJ_G0005261.1 mouse_genomes_project 11 132614799 132617043 - Gm16755 lincRNA lincRNA MGP_NODShiLtJ_T0028726.1 MGP_NODShiLtJ_G0018125.1 mouse_genomes_project 11 56348691 56352192 - MGP_NODShiLtJ_P0028726 0610009B22Rik protein_coding protein_coding MGP_NODShiLtJ_T0028727.1 MGP_NODShiLtJ_G0018125.1 mouse_genomes_project 11 56348691 56351971 - MGP_NODShiLtJ_P0028727 0610009B22Rik protein_coding protein_coding MGP_NODShiLtJ_T0029570.1 MGP_NODShiLtJ_G0018347.1 mouse_genomes_project 11 74223144 74486784 + MGP_NODShiLtJ_P0029570 Stx8 protein_coding protein_coding MGP_NODShiLtJ_T0029571.1 MGP_NODShiLtJ_G0018347.1 mouse_genomes_project 11 74223422 74244527 + MGP_NODShiLtJ_P0029571 Stx8 protein_coding protein_coding MGP_NODShiLtJ_T0029572.1 MGP_NODShiLtJ_G0018347.1 mouse_genomes_project 11 74223433 74231541 + MGP_NODShiLtJ_P0029572 Stx8 protein_coding protein_coding MGP_NODShiLtJ_T0029573.1 MGP_NODShiLtJ_G0018347.1 mouse_genomes_project 11 74223443 74483742 + Stx8 protein_coding processed_transcript MGP_NODShiLtJ_T0029574.1 MGP_NODShiLtJ_G0018347.1 mouse_genomes_project 11 74223445 74231414 + Stx8 protein_coding processed_transcript MGP_NODShiLtJ_T0029575.1 MGP_NODShiLtJ_G0018347.1 mouse_genomes_project 11 74223459 74230590 + Stx8 protein_coding processed_transcript MGP_NODShiLtJ_T0012414.1 MGP_NODShiLtJ_G0010522.1 mouse_genomes_project 11 28115165 28115563 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032137.1 MGP_NODShiLtJ_G0019012.1 mouse_genomes_project 11 110553538 110581672 + Ttc25 protein_coding retained_intron MGP_NODShiLtJ_T0032138.1 MGP_NODShiLtJ_G0019012.1 mouse_genomes_project 11 110553554 110558055 + Ttc25 protein_coding retained_intron MGP_NODShiLtJ_T0032139.1 MGP_NODShiLtJ_G0019012.1 mouse_genomes_project 11 110553645 110585703 + MGP_NODShiLtJ_P0032139 Ttc25 protein_coding protein_coding MGP_NODShiLtJ_T0032140.1 MGP_NODShiLtJ_G0019012.1 mouse_genomes_project 11 110557391 110558173 + Ttc25 protein_coding retained_intron MGP_NODShiLtJ_T0030135.1 MGP_NODShiLtJ_G0018464.1 mouse_genomes_project 11 77374665 77398384 - MGP_NODShiLtJ_P0030135 Scimp protein_coding protein_coding MGP_NODShiLtJ_T0003322.1 MGP_NODShiLtJ_G0003055.1 mouse_genomes_project 11 134060025 134060683 - Gm15643 antisense antisense MGP_NODShiLtJ_T0028006.1 MGP_NODShiLtJ_G0017939.1 mouse_genomes_project 11 22971196 22974478 + MGP_NODShiLtJ_P0028006 Zrsr1 protein_coding protein_coding MGP_NODShiLtJ_T0029886.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373143 76379337 - MGP_NODShiLtJ_P0029886 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029887.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373146 76379629 - MGP_NODShiLtJ_P0029887 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029888.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373149 76379638 - MGP_NODShiLtJ_P0029888 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029889.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373149 76379638 - MGP_NODShiLtJ_P0029889 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029890.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373149 76378882 - MGP_NODShiLtJ_P0029890 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029891.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373149 76379192 - MGP_NODShiLtJ_P0029891 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029892.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373149 76379638 - MGP_NODShiLtJ_P0029892 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029893.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373149 76379192 - MGP_NODShiLtJ_P0029893 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029894.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76373149 76380210 - MGP_NODShiLtJ_P0029894 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029895.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76374496 76379316 - MGP_NODShiLtJ_P0029895 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029896.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76374552 76379316 - MGP_NODShiLtJ_P0029896 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029897.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76374562 76379442 - MGP_NODShiLtJ_P0029897 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0029898.1 MGP_NODShiLtJ_G0018417.1 mouse_genomes_project 11 76374922 76379171 - MGP_NODShiLtJ_P0029898 Eif5a protein_coding protein_coding MGP_NODShiLtJ_T0033143.1 MGP_NODShiLtJ_G0019228.1 mouse_genomes_project 11 126758245 126816248 + Rab37 protein_coding retained_intron MGP_NODShiLtJ_T0033144.1 MGP_NODShiLtJ_G0019228.1 mouse_genomes_project 11 126758245 126831540 + MGP_NODShiLtJ_P0033144 Rab37 protein_coding protein_coding MGP_NODShiLtJ_T0033153.1 MGP_NODShiLtJ_G0019228.1 mouse_genomes_project 11 126823460 126831540 + MGP_NODShiLtJ_P0033153 Rab37 protein_coding protein_coding MGP_NODShiLtJ_T0033154.1 MGP_NODShiLtJ_G0019228.1 mouse_genomes_project 11 126823506 126826853 + Rab37 protein_coding retained_intron MGP_NODShiLtJ_T0098694.1 MGP_NODShiLtJ_G0037088.1 mouse_genomes_project 11 78723715 78723818 + Gm23226 snRNA snRNA MGP_NODShiLtJ_T0027818.1 MGP_NODShiLtJ_G0017894.1 mouse_genomes_project 11 6491952 6511001 - MGP_NODShiLtJ_P0027818 Hus1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027819.1 MGP_NODShiLtJ_G0017894.1 mouse_genomes_project 11 6491952 6511032 - MGP_NODShiLtJ_P0027819 Hus1 protein_coding protein_coding MGP_NODShiLtJ_T0027820.1 MGP_NODShiLtJ_G0017894.1 mouse_genomes_project 11 6494171 6510969 - Hus1 protein_coding retained_intron MGP_NODShiLtJ_T0027821.1 MGP_NODShiLtJ_G0017894.1 mouse_genomes_project 11 6496155 6511005 - Hus1 protein_coding retained_intron MGP_NODShiLtJ_T0027822.1 MGP_NODShiLtJ_G0017894.1 mouse_genomes_project 11 6497539 6510523 - Hus1 protein_coding retained_intron MGP_NODShiLtJ_T0027823.1 MGP_NODShiLtJ_G0017894.1 mouse_genomes_project 11 6505816 6510969 - Hus1 protein_coding processed_transcript MGP_NODShiLtJ_T0012533.1 MGP_NODShiLtJ_G0010641.1 mouse_genomes_project 11 76410358 76410850 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031132.1 MGP_NODShiLtJ_G0018723.1 mouse_genomes_project 11 92865276 92869153 - MGP_NODShiLtJ_P0031132 Pigw protein_coding protein_coding MGP_NODShiLtJ_T0031133.1 MGP_NODShiLtJ_G0018723.1 mouse_genomes_project 11 92865804 92869243 - MGP_NODShiLtJ_P0031133 Pigw protein_coding protein_coding MGP_NODShiLtJ_T0028195.1 MGP_NODShiLtJ_G0017977.1 mouse_genomes_project 11 32986127 32998897 - MGP_NODShiLtJ_P0028195 Stc2 protein_coding protein_coding MGP_NODShiLtJ_T0028196.1 MGP_NODShiLtJ_G0017977.1 mouse_genomes_project 11 32986812 32997926 - Stc2 protein_coding processed_transcript MGP_NODShiLtJ_T0028197.1 MGP_NODShiLtJ_G0017977.1 mouse_genomes_project 11 32994279 32996989 - Stc2 protein_coding processed_transcript MGP_NODShiLtJ_T0028198.1 MGP_NODShiLtJ_G0017977.1 mouse_genomes_project 11 32996821 32998870 - Stc2 protein_coding processed_transcript MGP_NODShiLtJ_T0028199.1 MGP_NODShiLtJ_G0017977.1 mouse_genomes_project 11 32996825 32997879 - Stc2 protein_coding processed_transcript MGP_NODShiLtJ_T0003185.1 MGP_NODShiLtJ_G0002948.1 mouse_genomes_project 11 87733597 87753414 - Adap2os antisense antisense MGP_NODShiLtJ_T0006265.1 MGP_NODShiLtJ_G0005221.1 mouse_genomes_project 11 106281877 106317527 - 2010300F17Rik lincRNA lincRNA MGP_NODShiLtJ_T0006266.1 MGP_NODShiLtJ_G0005221.1 mouse_genomes_project 11 106316114 106317501 - 2010300F17Rik lincRNA lincRNA MGP_NODShiLtJ_T0011198.1 MGP_NODShiLtJ_G0009331.1 mouse_genomes_project 11 94470352 94470455 + Gm25427 misc_RNA misc_RNA MGP_NODShiLtJ_T0003246.1 MGP_NODShiLtJ_G0002993.1 mouse_genomes_project 11 111583742 111584557 - Gm11626 antisense antisense MGP_NODShiLtJ_T0032704.1 MGP_NODShiLtJ_G0019125.1 mouse_genomes_project 11 114502725 114545400 + MGP_NODShiLtJ_P0032704 Crhr1 protein_coding protein_coding MGP_NODShiLtJ_T0006244.1 MGP_NODShiLtJ_G0005207.1 mouse_genomes_project 11 96620329 96623977 + Gm44783 lincRNA lincRNA MGP_NODShiLtJ_T0031741.1 MGP_NODShiLtJ_G0018875.1 mouse_genomes_project 11 106737000 106750593 - MGP_NODShiLtJ_P0031741 Tbkbp1 protein_coding protein_coding MGP_NODShiLtJ_T0031742.1 MGP_NODShiLtJ_G0018875.1 mouse_genomes_project 11 106737002 106750593 - MGP_NODShiLtJ_P0031742 Tbkbp1 protein_coding protein_coding MGP_NODShiLtJ_T0031743.1 MGP_NODShiLtJ_G0018875.1 mouse_genomes_project 11 106737006 106750927 - MGP_NODShiLtJ_P0031743 Tbkbp1 protein_coding protein_coding MGP_NODShiLtJ_T0031744.1 MGP_NODShiLtJ_G0018875.1 mouse_genomes_project 11 106737928 106751917 - MGP_NODShiLtJ_P0031744 Tbkbp1 protein_coding protein_coding MGP_NODShiLtJ_T0031745.1 MGP_NODShiLtJ_G0018875.1 mouse_genomes_project 11 106739235 106750929 - MGP_NODShiLtJ_P0031745 Tbkbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029692.1 MGP_NODShiLtJ_G0018372.1 mouse_genomes_project 11 75545176 75560613 - MGP_NODShiLtJ_P0029692 Alox8 protein_coding protein_coding MGP_NODShiLtJ_T0029693.1 MGP_NODShiLtJ_G0018372.1 mouse_genomes_project 11 75546334 75560579 - MGP_NODShiLtJ_P0029693 Alox8 protein_coding protein_coding MGP_NODShiLtJ_T0029694.1 MGP_NODShiLtJ_G0018372.1 mouse_genomes_project 11 75551111 75560581 - Alox8 protein_coding retained_intron MGP_NODShiLtJ_T0029695.1 MGP_NODShiLtJ_G0018372.1 mouse_genomes_project 11 75552776 75560154 - Alox8 protein_coding retained_intron MGP_NODShiLtJ_T0030830.1 MGP_NODShiLtJ_G0018637.1 mouse_genomes_project 11 86028329 86036002 - MGP_NODShiLtJ_P0030830 Nlk protein_coding protein_coding MGP_NODShiLtJ_T0030831.1 MGP_NODShiLtJ_G0018637.1 mouse_genomes_project 11 86028329 86159863 - MGP_NODShiLtJ_P0030831 Nlk protein_coding protein_coding MGP_NODShiLtJ_T0030832.1 MGP_NODShiLtJ_G0018637.1 mouse_genomes_project 11 86080422 86158521 - Nlk protein_coding retained_intron MGP_NODShiLtJ_T0009668.1 MGP_NODShiLtJ_G0007801.1 mouse_genomes_project 11 117461883 117461984 - Gm25994 miRNA miRNA MGP_NODShiLtJ_T0030712.1 MGP_NODShiLtJ_G0018609.1 mouse_genomes_project 11 85466595 85489832 + MGP_NODShiLtJ_P0030712 Flot2 protein_coding protein_coding MGP_NODShiLtJ_T0030713.1 MGP_NODShiLtJ_G0018609.1 mouse_genomes_project 11 85466595 85489832 + MGP_NODShiLtJ_P0030713 Flot2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030714.1 MGP_NODShiLtJ_G0018609.1 mouse_genomes_project 11 85466605 85489829 + MGP_NODShiLtJ_P0030714 Flot2 protein_coding protein_coding MGP_NODShiLtJ_T0030715.1 MGP_NODShiLtJ_G0018609.1 mouse_genomes_project 11 85466648 85489832 + MGP_NODShiLtJ_P0030715 Flot2 protein_coding protein_coding MGP_NODShiLtJ_T0030716.1 MGP_NODShiLtJ_G0018609.1 mouse_genomes_project 11 85468968 85489832 + Flot2 protein_coding processed_transcript MGP_NODShiLtJ_T0031090.1 MGP_NODShiLtJ_G0018715.1 mouse_genomes_project 11 91992587 92045259 - MGP_NODShiLtJ_P0031090 Tada2a protein_coding protein_coding MGP_NODShiLtJ_T0031091.1 MGP_NODShiLtJ_G0018715.1 mouse_genomes_project 11 91993198 91997389 - Tada2a protein_coding processed_transcript MGP_NODShiLtJ_T0031092.1 MGP_NODShiLtJ_G0018715.1 mouse_genomes_project 11 91993303 92009694 - MGP_NODShiLtJ_P0031092 Tada2a protein_coding protein_coding MGP_NODShiLtJ_T0031093.1 MGP_NODShiLtJ_G0018715.1 mouse_genomes_project 11 91996470 92003382 - Tada2a protein_coding processed_transcript MGP_NODShiLtJ_T0031094.1 MGP_NODShiLtJ_G0018715.1 mouse_genomes_project 11 91999862 92003434 - Tada2a protein_coding processed_transcript MGP_NODShiLtJ_T0029637.1 MGP_NODShiLtJ_G0018361.1 mouse_genomes_project 11 75334556 75344283 - protein_coding retained_intron MGP_NODShiLtJ_T0029638.1 MGP_NODShiLtJ_G0018361.1 mouse_genomes_project 11 75335316 75340607 - protein_coding retained_intron MGP_NODShiLtJ_T0029639.1 MGP_NODShiLtJ_G0018361.1 mouse_genomes_project 11 75336773 75360551 - MGP_NODShiLtJ_P0029639 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0029640.1 MGP_NODShiLtJ_G0018361.1 mouse_genomes_project 11 75336773 75341356 - MGP_NODShiLtJ_P0029640 protein_coding protein_coding MGP_NODShiLtJ_T0029641.1 MGP_NODShiLtJ_G0018361.1 mouse_genomes_project 11 75340721 75341832 - protein_coding retained_intron MGP_NODShiLtJ_T0029642.1 MGP_NODShiLtJ_G0018361.1 mouse_genomes_project 11 75342988 75347458 - MGP_NODShiLtJ_P0029642 protein_coding protein_coding MGP_NODShiLtJ_T0029643.1 MGP_NODShiLtJ_G0018361.1 mouse_genomes_project 11 75346747 75358235 - protein_coding retained_intron MGP_NODShiLtJ_T0097894.1 MGP_NODShiLtJ_G0036306.1 mouse_genomes_project 11 74321315 74321441 + Gm26157 rRNA rRNA MGP_NODShiLtJ_T0032069.1 MGP_NODShiLtJ_G0018989.1 mouse_genomes_project 11 110008804 110014354 - MGP_NODShiLtJ_P0032069 Krt34 protein_coding protein_coding MGP_NODShiLtJ_T0003303.1 MGP_NODShiLtJ_G0003040.1 mouse_genomes_project 11 129800843 129820363 + Gm11725 antisense antisense MGP_NODShiLtJ_T0006175.1 MGP_NODShiLtJ_G0005155.1 mouse_genomes_project 11 56648790 57003413 - lincRNA lincRNA MGP_NODShiLtJ_T0034057.1 MGP_NODShiLtJ_G0019405.1 mouse_genomes_project 11 133638481 133654041 + MGP_NODShiLtJ_P0034057 Fn3k protein_coding protein_coding MGP_NODShiLtJ_T0034058.1 MGP_NODShiLtJ_G0019405.1 mouse_genomes_project 11 133638535 133646550 + MGP_NODShiLtJ_P0034058 Fn3k protein_coding protein_coding MGP_NODShiLtJ_T0034059.1 MGP_NODShiLtJ_G0019405.1 mouse_genomes_project 11 133638536 133647074 + MGP_NODShiLtJ_P0034059 Fn3k protein_coding protein_coding MGP_NODShiLtJ_T0029008.1 MGP_NODShiLtJ_G0018199.1 mouse_genomes_project 11 63523933 63555171 + MGP_NODShiLtJ_P0029008 Irgm2 protein_coding protein_coding MGP_NODShiLtJ_T0029009.1 MGP_NODShiLtJ_G0018199.1 mouse_genomes_project 11 63541860 63555179 + MGP_NODShiLtJ_P0029009 Irgm2 protein_coding protein_coding MGP_NODShiLtJ_T0009566.1 MGP_NODShiLtJ_G0007699.1 mouse_genomes_project 11 23627460 23627551 - miRNA miRNA MGP_NODShiLtJ_T0101568.1 MGP_NODShiLtJ_G0039738.1 mouse_genomes_project 11 109544417 109544627 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0029314.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67166124 67171593 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029315.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67166124 67171623 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029316.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67166124 67171593 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029317.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67166124 67171623 - MGP_NODShiLtJ_P0029317 Mapk7 protein_coding protein_coding MGP_NODShiLtJ_T0029318.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67166124 67171593 - MGP_NODShiLtJ_P0029318 Mapk7 protein_coding protein_coding MGP_NODShiLtJ_T0029319.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67166124 67171623 - MGP_NODShiLtJ_P0029319 Mapk7 protein_coding protein_coding MGP_NODShiLtJ_T0029320.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67166771 67168263 - MGP_NODShiLtJ_P0029320 Mapk7 protein_coding protein_coding MGP_NODShiLtJ_T0029321.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67168626 67171036 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029322.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67168880 67171593 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029323.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67168902 67171593 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029324.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67168920 67171733 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029325.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67168930 67171593 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029326.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67168930 67171515 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0029327.1 MGP_NODShiLtJ_G0018291.1 mouse_genomes_project 11 67168966 67171515 - Mapk7 protein_coding processed_transcript MGP_NODShiLtJ_T0031810.1 MGP_NODShiLtJ_G0018890.1 mouse_genomes_project 11 107430966 107436149 - MGP_NODShiLtJ_P0031810 1700001P01Rik protein_coding protein_coding MGP_NODShiLtJ_T0012372.1 MGP_NODShiLtJ_G0010480.1 mouse_genomes_project 11 14457017 14464167 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027476.1 MGP_NODShiLtJ_G0017815.1 mouse_genomes_project 11 343634 349535 + MGP_NODShiLtJ_P0027476 Pla2g3 protein_coding protein_coding MGP_NODShiLtJ_T0027477.1 MGP_NODShiLtJ_G0017815.1 mouse_genomes_project 11 343649 354741 + MGP_NODShiLtJ_P0027477 Pla2g3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027478.1 MGP_NODShiLtJ_G0017815.1 mouse_genomes_project 11 344340 349532 + Pla2g3 protein_coding retained_intron MGP_NODShiLtJ_T0006251.1 MGP_NODShiLtJ_G0005212.1 mouse_genomes_project 11 98650855 98659612 - Gm11494 lincRNA lincRNA MGP_NODShiLtJ_T0029065.1 MGP_NODShiLtJ_G0018231.1 mouse_genomes_project 11 64337330 64354465 - MGP_NODShiLtJ_P0029065 Zfp39 protein_coding protein_coding MGP_NODShiLtJ_T0028123.1 MGP_NODShiLtJ_G0017962.1 mouse_genomes_project 11 30714400 30889300 + MGP_NODShiLtJ_P0028123 Ccdc88a protein_coding protein_coding MGP_NODShiLtJ_T0028124.1 MGP_NODShiLtJ_G0017962.1 mouse_genomes_project 11 30836510 30862909 + MGP_NODShiLtJ_P0028124 Ccdc88a protein_coding protein_coding MGP_NODShiLtJ_T0028125.1 MGP_NODShiLtJ_G0017962.1 mouse_genomes_project 11 30843752 30886236 + MGP_NODShiLtJ_P0028125 Ccdc88a protein_coding protein_coding MGP_NODShiLtJ_T0028126.1 MGP_NODShiLtJ_G0017962.1 mouse_genomes_project 11 30866355 30885648 + MGP_NODShiLtJ_P0028126 Ccdc88a protein_coding protein_coding MGP_NODShiLtJ_T0028127.1 MGP_NODShiLtJ_G0017962.1 mouse_genomes_project 11 30874816 30879719 + Ccdc88a protein_coding processed_transcript MGP_NODShiLtJ_T0032089.1 MGP_NODShiLtJ_G0019001.1 mouse_genomes_project 11 110253070 110256161 - Krt42 protein_coding retained_intron MGP_NODShiLtJ_T0032090.1 MGP_NODShiLtJ_G0019001.1 mouse_genomes_project 11 110253075 110260054 - MGP_NODShiLtJ_P0032090 Krt42 protein_coding protein_coding MGP_NODShiLtJ_T0031095.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92045330 92146523 + MGP_NODShiLtJ_P0031095 Acaca protein_coding protein_coding MGP_NODShiLtJ_T0031096.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92045358 92048766 + Acaca protein_coding processed_transcript MGP_NODShiLtJ_T0031098.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92096251 92347141 + MGP_NODShiLtJ_P0031098 Acaca protein_coding protein_coding MGP_NODShiLtJ_T0031099.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92096483 92169538 + Acaca protein_coding retained_intron MGP_NODShiLtJ_T0031100.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92104023 92146428 + MGP_NODShiLtJ_P0031100 Acaca protein_coding protein_coding MGP_NODShiLtJ_T0031101.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92104023 92165056 + MGP_NODShiLtJ_P0031101 Acaca protein_coding protein_coding MGP_NODShiLtJ_T0031102.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92104044 92347144 + MGP_NODShiLtJ_P0031102 Acaca protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031103.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92104050 92146417 + MGP_NODShiLtJ_P0031103 Acaca protein_coding protein_coding MGP_NODShiLtJ_T0031104.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92122913 92347135 + MGP_NODShiLtJ_P0031104 Acaca protein_coding protein_coding MGP_NODShiLtJ_T0031105.1 MGP_NODShiLtJ_G0018716.1 mouse_genomes_project 11 92215053 92245824 + MGP_NODShiLtJ_P0031105 Acaca protein_coding protein_coding MGP_NODShiLtJ_T0009640.1 MGP_NODShiLtJ_G0007773.1 mouse_genomes_project 11 96735955 96736047 + Mir378b miRNA miRNA MGP_NODShiLtJ_T0012515.1 MGP_NODShiLtJ_G0010623.1 mouse_genomes_project 11 66864561 66865017 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003193.1 MGP_NODShiLtJ_G0002955.1 mouse_genomes_project 11 93290841 93291290 + Appbp2os antisense pseudogene MGP_NODShiLtJ_T0003194.1 MGP_NODShiLtJ_G0002955.1 mouse_genomes_project 11 93291237 93294370 + Appbp2os antisense antisense MGP_NODShiLtJ_T0031281.1 MGP_NODShiLtJ_G0018756.1 mouse_genomes_project 11 95837969 95861951 + MGP_NODShiLtJ_P0031281 Mtmr4 protein_coding protein_coding MGP_NODShiLtJ_T0031282.1 MGP_NODShiLtJ_G0018756.1 mouse_genomes_project 11 95838026 95861951 + MGP_NODShiLtJ_P0031282 Mtmr4 protein_coding protein_coding MGP_NODShiLtJ_T0031283.1 MGP_NODShiLtJ_G0018756.1 mouse_genomes_project 11 95838033 95844767 + MGP_NODShiLtJ_P0031283 Mtmr4 protein_coding protein_coding MGP_NODShiLtJ_T0031284.1 MGP_NODShiLtJ_G0018756.1 mouse_genomes_project 11 95838271 95843553 + MGP_NODShiLtJ_P0031284 Mtmr4 protein_coding protein_coding MGP_NODShiLtJ_T0031285.1 MGP_NODShiLtJ_G0018756.1 mouse_genomes_project 11 95838704 95860821 + MGP_NODShiLtJ_P0031285 Mtmr4 protein_coding protein_coding MGP_NODShiLtJ_T0031286.1 MGP_NODShiLtJ_G0018756.1 mouse_genomes_project 11 95841450 95846899 + MGP_NODShiLtJ_P0031286 Mtmr4 protein_coding protein_coding MGP_NODShiLtJ_T0028950.1 MGP_NODShiLtJ_G0018180.1 mouse_genomes_project 11 60213958 60241446 - MGP_NODShiLtJ_P0028950 Slc36a2 protein_coding protein_coding MGP_NODShiLtJ_T0028951.1 MGP_NODShiLtJ_G0018180.1 mouse_genomes_project 11 60224464 60241446 - Slc36a2 protein_coding processed_transcript MGP_NODShiLtJ_T0028712.1 MGP_NODShiLtJ_G0018120.1 mouse_genomes_project 11 56260040 56266800 - MGP_NODShiLtJ_P0028712 Hnrnpab protein_coding protein_coding MGP_NODShiLtJ_T0028713.1 MGP_NODShiLtJ_G0018120.1 mouse_genomes_project 11 56260809 56266800 - MGP_NODShiLtJ_P0028713 Hnrnpab protein_coding protein_coding MGP_NODShiLtJ_T0028714.1 MGP_NODShiLtJ_G0018120.1 mouse_genomes_project 11 56261114 56266800 - MGP_NODShiLtJ_P0028714 Hnrnpab protein_coding protein_coding MGP_NODShiLtJ_T0034008.1 MGP_NODShiLtJ_G0019391.1 mouse_genomes_project 11 133219183 133221855 - MGP_NODShiLtJ_P0034008 Cd7 protein_coding protein_coding MGP_NODShiLtJ_T0034009.1 MGP_NODShiLtJ_G0019391.1 mouse_genomes_project 11 133220321 133221855 - Cd7 protein_coding retained_intron MGP_NODShiLtJ_T0012365.1 MGP_NODShiLtJ_G0010473.1 mouse_genomes_project 11 11108269 11108987 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012449.1 MGP_NODShiLtJ_G0010557.1 mouse_genomes_project 11 43605159 43606368 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098674.1 MGP_NODShiLtJ_G0037068.1 mouse_genomes_project 11 26826050 26826214 - Gm22868 snRNA snRNA MGP_NODShiLtJ_T0029818.1 MGP_NODShiLtJ_G0018401.1 mouse_genomes_project 11 76215771 76230598 + MGP_NODShiLtJ_P0029818 Zbtb4 protein_coding protein_coding MGP_NODShiLtJ_T0029819.1 MGP_NODShiLtJ_G0018401.1 mouse_genomes_project 11 76215771 76234409 + MGP_NODShiLtJ_P0029819 Zbtb4 protein_coding protein_coding MGP_NODShiLtJ_T0029820.1 MGP_NODShiLtJ_G0018401.1 mouse_genomes_project 11 76215843 76232337 + MGP_NODShiLtJ_P0029820 Zbtb4 protein_coding protein_coding MGP_NODShiLtJ_T0029821.1 MGP_NODShiLtJ_G0018401.1 mouse_genomes_project 11 76215865 76228698 + MGP_NODShiLtJ_P0029821 Zbtb4 protein_coding protein_coding MGP_NODShiLtJ_T0029822.1 MGP_NODShiLtJ_G0018401.1 mouse_genomes_project 11 76216298 76226427 + MGP_NODShiLtJ_P0029822 Zbtb4 protein_coding protein_coding MGP_NODShiLtJ_T0029823.1 MGP_NODShiLtJ_G0018401.1 mouse_genomes_project 11 76216393 76226411 + MGP_NODShiLtJ_P0029823 Zbtb4 protein_coding protein_coding MGP_NODShiLtJ_T0029824.1 MGP_NODShiLtJ_G0018401.1 mouse_genomes_project 11 76225794 76230062 + MGP_NODShiLtJ_P0029824 Zbtb4 protein_coding protein_coding MGP_NODShiLtJ_T0033286.1 MGP_NODShiLtJ_G0019255.1 mouse_genomes_project 11 127366806 127428597 - MGP_NODShiLtJ_P0033286 Grb2 protein_coding protein_coding MGP_NODShiLtJ_T0033287.1 MGP_NODShiLtJ_G0019255.1 mouse_genomes_project 11 127366806 127428824 - MGP_NODShiLtJ_P0033287 Grb2 protein_coding protein_coding MGP_NODShiLtJ_T0033288.1 MGP_NODShiLtJ_G0019255.1 mouse_genomes_project 11 127366806 127439411 - MGP_NODShiLtJ_P0033288 Grb2 protein_coding protein_coding MGP_NODShiLtJ_T0033289.1 MGP_NODShiLtJ_G0019255.1 mouse_genomes_project 11 127367411 127439390 - MGP_NODShiLtJ_P0033289 Grb2 protein_coding protein_coding MGP_NODShiLtJ_T0033290.1 MGP_NODShiLtJ_G0019255.1 mouse_genomes_project 11 127373295 127429218 - MGP_NODShiLtJ_P0033290 Grb2 protein_coding protein_coding MGP_NODShiLtJ_T0003143.1 MGP_NODShiLtJ_G0002913.1 mouse_genomes_project 11 68367085 68368973 - Gm12280 antisense antisense MGP_NODShiLtJ_T0012453.1 MGP_NODShiLtJ_G0010561.1 mouse_genomes_project 11 45092671 45093003 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032901.1 MGP_NODShiLtJ_G0019169.1 mouse_genomes_project 11 117677797 117691168 - MGP_NODShiLtJ_P0032901 Gm10184 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032902.1 MGP_NODShiLtJ_G0019169.1 mouse_genomes_project 11 117677797 117691269 - MGP_NODShiLtJ_P0032902 Gm10184 protein_coding protein_coding MGP_NODShiLtJ_T0032903.1 MGP_NODShiLtJ_G0019169.1 mouse_genomes_project 11 117682823 117683789 - Gm10184 protein_coding retained_intron MGP_NODShiLtJ_T0032904.1 MGP_NODShiLtJ_G0019169.1 mouse_genomes_project 11 117687083 117691097 - MGP_NODShiLtJ_P0032904 Gm10184 protein_coding protein_coding MGP_NODShiLtJ_T0009610.1 MGP_NODShiLtJ_G0007743.1 mouse_genomes_project 11 76731855 76731980 - Mir497b miRNA miRNA MGP_NODShiLtJ_T0003137.1 MGP_NODShiLtJ_G0002907.1 mouse_genomes_project 11 66557165 66568110 - Map2k3os antisense antisense MGP_NODShiLtJ_T0012470.1 MGP_NODShiLtJ_G0010578.1 mouse_genomes_project 11 54173941 54174428 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030358.1 MGP_NODShiLtJ_G0018525.1 mouse_genomes_project 11 80794015 80794948 - MGP_NODShiLtJ_P0030358 Olfr394 protein_coding protein_coding MGP_NODShiLtJ_T0028432.1 MGP_NODShiLtJ_G0018040.1 mouse_genomes_project 11 49857980 49874649 - MGP_NODShiLtJ_P0028432 Lsm11 protein_coding protein_coding MGP_NODShiLtJ_T0028433.1 MGP_NODShiLtJ_G0018040.1 mouse_genomes_project 11 49860789 49874649 - MGP_NODShiLtJ_P0028433 Lsm11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0029010.1 MGP_NODShiLtJ_G0018200.1 mouse_genomes_project 11 63611592 63630019 + MGP_NODShiLtJ_P0029010 protein_coding protein_coding MGP_NODShiLtJ_T0029042.1 MGP_NODShiLtJ_G0018216.1 mouse_genomes_project 11 63979646 63987389 - MGP_NODShiLtJ_P0029042 2210407C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0029043.1 MGP_NODShiLtJ_G0018216.1 mouse_genomes_project 11 63979651 63984808 - MGP_NODShiLtJ_P0029043 2210407C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0029044.1 MGP_NODShiLtJ_G0018216.1 mouse_genomes_project 11 63983628 63984801 - 2210407C18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0031816.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107462006 107469824 + MGP_NODShiLtJ_P0031816 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031817.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107462183 107502689 + MGP_NODShiLtJ_P0031817 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031818.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107462678 107470304 + Lasp1 protein_coding retained_intron MGP_NODShiLtJ_T0031819.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107462844 107497524 + MGP_NODShiLtJ_P0031819 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031820.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107463004 107497512 + MGP_NODShiLtJ_P0031820 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031821.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107463177 107497480 + MGP_NODShiLtJ_P0031821 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031822.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107463303 107487778 + MGP_NODShiLtJ_P0031822 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031823.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107463309 107469904 + MGP_NODShiLtJ_P0031823 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031824.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107465001 107487780 + MGP_NODShiLtJ_P0031824 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031825.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107468176 107500043 + MGP_NODShiLtJ_P0031825 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031826.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107469294 107469885 + MGP_NODShiLtJ_P0031826 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031827.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107469486 107478811 + MGP_NODShiLtJ_P0031827 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031828.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107478276 107487819 + MGP_NODShiLtJ_P0031828 Lasp1 protein_coding protein_coding MGP_NODShiLtJ_T0031829.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107497117 107500129 + Lasp1 protein_coding retained_intron MGP_NODShiLtJ_T0031830.1 MGP_NODShiLtJ_G0018892.1 mouse_genomes_project 11 107497336 107498304 + Lasp1 protein_coding retained_intron MGP_NODShiLtJ_T0099921.1 MGP_NODShiLtJ_G0038315.1 mouse_genomes_project 11 52983078 52983145 + Gm25296 snoRNA snoRNA MGP_NODShiLtJ_T0006144.1 MGP_NODShiLtJ_G0005127.1 mouse_genomes_project 11 30994338 31038536 - lincRNA lincRNA MGP_NODShiLtJ_T0029430.1 MGP_NODShiLtJ_G0018309.1 mouse_genomes_project 11 68455213 68473636 + MGP_NODShiLtJ_P0029430 Mmgt2 protein_coding protein_coding MGP_NODShiLtJ_T0029431.1 MGP_NODShiLtJ_G0018309.1 mouse_genomes_project 11 68455362 68470890 + Mmgt2 protein_coding retained_intron MGP_NODShiLtJ_T0029432.1 MGP_NODShiLtJ_G0018309.1 mouse_genomes_project 11 68455366 68473566 + Mmgt2 protein_coding processed_transcript MGP_NODShiLtJ_T0029433.1 MGP_NODShiLtJ_G0018309.1 mouse_genomes_project 11 68455369 68473498 + Mmgt2 protein_coding processed_transcript MGP_NODShiLtJ_T0029434.1 MGP_NODShiLtJ_G0018309.1 mouse_genomes_project 11 68455380 68473706 + MGP_NODShiLtJ_P0029434 Mmgt2 protein_coding protein_coding MGP_NODShiLtJ_T0029435.1 MGP_NODShiLtJ_G0018309.1 mouse_genomes_project 11 68455384 68474013 + MGP_NODShiLtJ_P0029435 Mmgt2 protein_coding protein_coding MGP_NODShiLtJ_T0029436.1 MGP_NODShiLtJ_G0018309.1 mouse_genomes_project 11 68455998 68475131 + MGP_NODShiLtJ_P0029436 Mmgt2 protein_coding protein_coding MGP_NODShiLtJ_T0003146.1 MGP_NODShiLtJ_G0002915.1 mouse_genomes_project 11 68440260 68444358 + Lrrc75aos1 antisense antisense MGP_NODShiLtJ_T0031164.1 MGP_NODShiLtJ_G0018730.1 mouse_genomes_project 11 93373650 93414033 + MGP_NODShiLtJ_P0031164 Ppm1d protein_coding protein_coding MGP_NODShiLtJ_T0031165.1 MGP_NODShiLtJ_G0018730.1 mouse_genomes_project 11 93374570 93404172 + MGP_NODShiLtJ_P0031165 Ppm1d protein_coding protein_coding MGP_NODShiLtJ_T0031569.1 MGP_NODShiLtJ_G0018828.1 mouse_genomes_project 11 104542060 104547875 - MGP_NODShiLtJ_P0031569 Dlx4 protein_coding protein_coding MGP_NODShiLtJ_T0031570.1 MGP_NODShiLtJ_G0018828.1 mouse_genomes_project 11 104545238 104547413 - Dlx4 protein_coding processed_transcript MGP_NODShiLtJ_T0098711.1 MGP_NODShiLtJ_G0037105.1 mouse_genomes_project 11 95635267 95635431 + Rnu1a1 snRNA snRNA MGP_NODShiLtJ_T0017114.1 MGP_NODShiLtJ_G0015068.1 mouse_genomes_project 11 106442632 106454520 - Gm11523 processed_transcript lincRNA MGP_NODShiLtJ_T0017115.1 MGP_NODShiLtJ_G0015068.1 mouse_genomes_project 11 106442925 106454526 - Gm11523 processed_transcript lincRNA MGP_NODShiLtJ_T0017116.1 MGP_NODShiLtJ_G0015068.1 mouse_genomes_project 11 106443054 106454506 - Gm11523 processed_transcript antisense MGP_NODShiLtJ_T0032966.1 MGP_NODShiLtJ_G0019182.1 mouse_genomes_project 11 119805214 119837511 + MGP_NODShiLtJ_P0032966 Axin2 protein_coding protein_coding MGP_NODShiLtJ_T0032967.1 MGP_NODShiLtJ_G0019182.1 mouse_genomes_project 11 119805665 119808476 + MGP_NODShiLtJ_P0032967 Axin2 protein_coding protein_coding MGP_NODShiLtJ_T0032968.1 MGP_NODShiLtJ_G0019182.1 mouse_genomes_project 11 119806202 119808491 + MGP_NODShiLtJ_P0032968 Axin2 protein_coding protein_coding MGP_NODShiLtJ_T0032969.1 MGP_NODShiLtJ_G0019182.1 mouse_genomes_project 11 119806514 119808387 + MGP_NODShiLtJ_P0032969 Axin2 protein_coding protein_coding MGP_NODShiLtJ_T0032970.1 MGP_NODShiLtJ_G0019182.1 mouse_genomes_project 11 119808073 119836239 + MGP_NODShiLtJ_P0032970 Axin2 protein_coding protein_coding MGP_NODShiLtJ_T0032971.1 MGP_NODShiLtJ_G0019182.1 mouse_genomes_project 11 119824807 119828492 + Axin2 protein_coding processed_transcript MGP_NODShiLtJ_T0032972.1 MGP_NODShiLtJ_G0019182.1 mouse_genomes_project 11 119830342 119837511 + Axin2 protein_coding processed_transcript MGP_NODShiLtJ_T0027799.1 MGP_NODShiLtJ_G0017886.1 mouse_genomes_project 11 3859130 3861115 - Wap protein_coding processed_transcript MGP_NODShiLtJ_T0027800.1 MGP_NODShiLtJ_G0017886.1 mouse_genomes_project 11 3859130 3862188 - MGP_NODShiLtJ_P0027800 Wap protein_coding protein_coding MGP_NODShiLtJ_T0027801.1 MGP_NODShiLtJ_G0017886.1 mouse_genomes_project 11 3859187 3861104 - Wap protein_coding processed_transcript MGP_NODShiLtJ_T0028860.1 MGP_NODShiLtJ_G0018162.1 mouse_genomes_project 11 58925471 58973606 - MGP_NODShiLtJ_P0028860 Slc22a4 protein_coding protein_coding MGP_NODShiLtJ_T0028861.1 MGP_NODShiLtJ_G0018162.1 mouse_genomes_project 11 58934407 58951503 - Slc22a4 protein_coding processed_transcript MGP_NODShiLtJ_T0028862.1 MGP_NODShiLtJ_G0018162.1 mouse_genomes_project 11 58957794 58973468 - Slc22a4 protein_coding processed_transcript MGP_NODShiLtJ_T0032797.1 MGP_NODShiLtJ_G0019145.1 mouse_genomes_project 11 116673992 116682025 + MGP_NODShiLtJ_P0032797 Taco1 protein_coding protein_coding MGP_NODShiLtJ_T0098679.1 MGP_NODShiLtJ_G0037073.1 mouse_genomes_project 11 44121671 44121827 - Gm24446 snRNA snRNA MGP_NODShiLtJ_T0099934.1 MGP_NODShiLtJ_G0038328.1 mouse_genomes_project 11 75426606 75426741 + Snord118 snoRNA snoRNA MGP_NODShiLtJ_T0006157.1 MGP_NODShiLtJ_G0005138.1 mouse_genomes_project 11 40797872 40829229 - Gm12130 lincRNA lincRNA MGP_NODShiLtJ_T0033192.1 MGP_NODShiLtJ_G0019240.1 mouse_genomes_project 11 127069641 127086888 + MGP_NODShiLtJ_P0033192 Cdr2l protein_coding protein_coding MGP_NODShiLtJ_T0099924.1 MGP_NODShiLtJ_G0038318.1 mouse_genomes_project 11 56406109 56406253 - Gm25291 snoRNA snoRNA MGP_NODShiLtJ_T0030355.1 MGP_NODShiLtJ_G0018523.1 mouse_genomes_project 11 80723490 80726284 - MGP_NODShiLtJ_P0030355 Olfr392 protein_coding protein_coding MGP_NODShiLtJ_T0030356.1 MGP_NODShiLtJ_G0018523.1 mouse_genomes_project 11 80724104 80726281 - MGP_NODShiLtJ_P0030356 Olfr392 protein_coding protein_coding MGP_NODShiLtJ_T0032685.1 MGP_NODShiLtJ_G0019120.1 mouse_genomes_project 11 113993817 114016080 - MGP_NODShiLtJ_P0032685 Gosr2 protein_coding protein_coding MGP_NODShiLtJ_T0032686.1 MGP_NODShiLtJ_G0019120.1 mouse_genomes_project 11 113995156 114015876 - MGP_NODShiLtJ_P0032686 Gosr2 protein_coding protein_coding MGP_NODShiLtJ_T0032687.1 MGP_NODShiLtJ_G0019120.1 mouse_genomes_project 11 113995363 114015880 - Gosr2 protein_coding processed_transcript MGP_NODShiLtJ_T0031359.1 MGP_NODShiLtJ_G0018775.1 mouse_genomes_project 11 97250811 97273089 - MGP_NODShiLtJ_P0031359 Akap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031360.1 MGP_NODShiLtJ_G0018775.1 mouse_genomes_project 11 97250811 97273089 - MGP_NODShiLtJ_P0031360 Akap1 protein_coding protein_coding MGP_NODShiLtJ_T0031361.1 MGP_NODShiLtJ_G0018775.1 mouse_genomes_project 11 97250811 97286249 - MGP_NODShiLtJ_P0031361 Akap1 protein_coding protein_coding MGP_NODShiLtJ_T0031362.1 MGP_NODShiLtJ_G0018775.1 mouse_genomes_project 11 97251775 97285380 - MGP_NODShiLtJ_P0031362 Akap1 protein_coding protein_coding MGP_NODShiLtJ_T0031363.1 MGP_NODShiLtJ_G0018775.1 mouse_genomes_project 11 97257867 97262394 - Akap1 protein_coding retained_intron MGP_NODShiLtJ_T0031364.1 MGP_NODShiLtJ_G0018775.1 mouse_genomes_project 11 97259822 97265377 - MGP_NODShiLtJ_P0031364 Akap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009683.1 MGP_NODShiLtJ_G0007816.1 mouse_genomes_project 11 132153761 132153873 - Gm25948 miRNA miRNA MGP_NODShiLtJ_T0032025.1 MGP_NODShiLtJ_G0018946.1 mouse_genomes_project 11 109399814 109405486 - MGP_NODShiLtJ_P0032025 Krt40 protein_coding protein_coding MGP_NODShiLtJ_T0032026.1 MGP_NODShiLtJ_G0018946.1 mouse_genomes_project 11 109399814 109405486 - MGP_NODShiLtJ_P0032026 Krt40 protein_coding protein_coding MGP_NODShiLtJ_T0028054.1 MGP_NODShiLtJ_G0017947.1 mouse_genomes_project 11 23794690 23817254 - MGP_NODShiLtJ_P0028054 Pex13 protein_coding protein_coding MGP_NODShiLtJ_T0028055.1 MGP_NODShiLtJ_G0017947.1 mouse_genomes_project 11 23797667 23817147 - MGP_NODShiLtJ_P0028055 Pex13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028056.1 MGP_NODShiLtJ_G0017947.1 mouse_genomes_project 11 23807187 23817137 - Pex13 protein_coding processed_transcript MGP_NODShiLtJ_T0028057.1 MGP_NODShiLtJ_G0017947.1 mouse_genomes_project 11 23807440 23816968 - Pex13 protein_coding processed_transcript MGP_NODShiLtJ_T0012634.1 MGP_NODShiLtJ_G0010742.1 mouse_genomes_project 11 115262734 115263851 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003172.1 MGP_NODShiLtJ_G0002936.1 mouse_genomes_project 11 77167323 77169323 - Gm12316 antisense antisense MGP_NODShiLtJ_T0027935.1 MGP_NODShiLtJ_G0017921.1 mouse_genomes_project 11 19764845 19782820 + Rab1a protein_coding processed_transcript MGP_NODShiLtJ_T0027936.1 MGP_NODShiLtJ_G0017921.1 mouse_genomes_project 11 19765015 19787755 + Rab1a protein_coding processed_transcript MGP_NODShiLtJ_T0027937.1 MGP_NODShiLtJ_G0017921.1 mouse_genomes_project 11 19765036 19790997 + MGP_NODShiLtJ_P0027937 Rab1a protein_coding protein_coding MGP_NODShiLtJ_T0028182.1 MGP_NODShiLtJ_G0017974.1 mouse_genomes_project 11 32460171 32698307 + MGP_NODShiLtJ_P0028182 Asb3 protein_coding protein_coding MGP_NODShiLtJ_T0028188.1 MGP_NODShiLtJ_G0017974.1 mouse_genomes_project 11 32537303 32699694 + MGP_NODShiLtJ_P0028188 Asb3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028189.1 MGP_NODShiLtJ_G0017974.1 mouse_genomes_project 11 32537316 32681046 + MGP_NODShiLtJ_P0028189 Asb3 protein_coding protein_coding MGP_NODShiLtJ_T0028190.1 MGP_NODShiLtJ_G0017974.1 mouse_genomes_project 11 32537345 32618045 + Asb3 protein_coding retained_intron MGP_NODShiLtJ_T0028193.1 MGP_NODShiLtJ_G0017974.1 mouse_genomes_project 11 32587460 32698216 + MGP_NODShiLtJ_P0028193 Asb3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0028194.1 MGP_NODShiLtJ_G0017974.1 mouse_genomes_project 11 32643592 32646793 + Asb3 protein_coding retained_intron MGP_NODShiLtJ_T0031985.1 MGP_NODShiLtJ_G0018930.1 mouse_genomes_project 11 108787236 108821452 - MGP_NODShiLtJ_P0031985 Top2a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031986.1 MGP_NODShiLtJ_G0018930.1 mouse_genomes_project 11 108787237 108821575 - MGP_NODShiLtJ_P0031986 Top2a protein_coding protein_coding MGP_NODShiLtJ_T0031987.1 MGP_NODShiLtJ_G0018930.1 mouse_genomes_project 11 108787365 108790019 - Top2a protein_coding processed_transcript MGP_NODShiLtJ_T0031988.1 MGP_NODShiLtJ_G0018930.1 mouse_genomes_project 11 108787761 108789665 - Top2a protein_coding processed_transcript MGP_NODShiLtJ_T0031989.1 MGP_NODShiLtJ_G0018930.1 mouse_genomes_project 11 108795086 108796400 - Top2a protein_coding processed_transcript MGP_NODShiLtJ_T0031990.1 MGP_NODShiLtJ_G0018930.1 mouse_genomes_project 11 108798763 108801602 - Top2a protein_coding processed_transcript MGP_NODShiLtJ_T0031991.1 MGP_NODShiLtJ_G0018930.1 mouse_genomes_project 11 108813948 108819606 - Top2a protein_coding processed_transcript MGP_NODShiLtJ_T0031992.1 MGP_NODShiLtJ_G0018930.1 mouse_genomes_project 11 108819480 108821564 - Top2a protein_coding processed_transcript MGP_NODShiLtJ_T0029437.1 MGP_NODShiLtJ_G0018310.1 mouse_genomes_project 11 68511636 68543685 - MGP_NODShiLtJ_P0029437 Zfp287 protein_coding protein_coding MGP_NODShiLtJ_T0029438.1 MGP_NODShiLtJ_G0018310.1 mouse_genomes_project 11 68525501 68543446 - MGP_NODShiLtJ_P0029438 Zfp287 protein_coding protein_coding MGP_NODShiLtJ_T0029439.1 MGP_NODShiLtJ_G0018310.1 mouse_genomes_project 11 68533391 68540471 - MGP_NODShiLtJ_P0029439 Zfp287 protein_coding protein_coding MGP_NODShiLtJ_T0029440.1 MGP_NODShiLtJ_G0018310.1 mouse_genomes_project 11 68538521 68543705 - Zfp287 protein_coding retained_intron MGP_NODShiLtJ_T0099970.1 MGP_NODShiLtJ_G0038364.1 mouse_genomes_project 11 131809628 131809708 + Gm23663 snoRNA snoRNA MGP_NODShiLtJ_T0028130.1 MGP_NODShiLtJ_G0017964.1 mouse_genomes_project 11 30912645 30919652 + MGP_NODShiLtJ_P0028130 Mtif2 protein_coding protein_coding MGP_NODShiLtJ_T0028131.1 MGP_NODShiLtJ_G0017964.1 mouse_genomes_project 11 30912673 30920171 + MGP_NODShiLtJ_P0028131 Mtif2 protein_coding protein_coding MGP_NODShiLtJ_T0028132.1 MGP_NODShiLtJ_G0017964.1 mouse_genomes_project 11 30912684 30916495 + Mtif2 protein_coding processed_transcript MGP_NODShiLtJ_T0028133.1 MGP_NODShiLtJ_G0017964.1 mouse_genomes_project 11 30912685 30932124 + MGP_NODShiLtJ_P0028133 Mtif2 protein_coding protein_coding MGP_NODShiLtJ_T0028134.1 MGP_NODShiLtJ_G0017964.1 mouse_genomes_project 11 30912687 30926402 + MGP_NODShiLtJ_P0028134 Mtif2 protein_coding protein_coding MGP_NODShiLtJ_T0028135.1 MGP_NODShiLtJ_G0017964.1 mouse_genomes_project 11 30912694 30932121 + MGP_NODShiLtJ_P0028135 Mtif2 protein_coding protein_coding MGP_NODShiLtJ_T0028136.1 MGP_NODShiLtJ_G0017964.1 mouse_genomes_project 11 30919544 30926509 + MGP_NODShiLtJ_P0028136 Mtif2 protein_coding protein_coding MGP_NODShiLtJ_T0028137.1 MGP_NODShiLtJ_G0017964.1 mouse_genomes_project 11 30926207 30928866 + Mtif2 protein_coding processed_transcript MGP_NODShiLtJ_T0029385.1 MGP_NODShiLtJ_G0018302.1 mouse_genomes_project 11 68027159 68041308 - MGP_NODShiLtJ_P0029385 Zswim7 protein_coding protein_coding MGP_NODShiLtJ_T0028848.1 MGP_NODShiLtJ_G0018157.1 mouse_genomes_project 11 58677051 58677958 - MGP_NODShiLtJ_P0028848 Gm17334 protein_coding protein_coding MGP_NODShiLtJ_T0009584.1 MGP_NODShiLtJ_G0007717.1 mouse_genomes_project 11 54751095 54751157 + Mir6919 miRNA miRNA MGP_NODShiLtJ_T0017069.1 MGP_NODShiLtJ_G0015045.1 mouse_genomes_project 11 65018584 65026567 + 4933439C10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017070.1 MGP_NODShiLtJ_G0015045.1 mouse_genomes_project 11 65018607 65023993 + 4933439C10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017071.1 MGP_NODShiLtJ_G0015045.1 mouse_genomes_project 11 65019016 65019772 + 4933439C10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017072.1 MGP_NODShiLtJ_G0015045.1 mouse_genomes_project 11 65019072 65023023 + 4933439C10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017073.1 MGP_NODShiLtJ_G0015045.1 mouse_genomes_project 11 65019587 65023075 + 4933439C10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017074.1 MGP_NODShiLtJ_G0015045.1 mouse_genomes_project 11 65020560 65023993 + 4933439C10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0098695.1 MGP_NODShiLtJ_G0037089.1 mouse_genomes_project 11 79660444 79660606 + Gm26121 snRNA snRNA MGP_NODShiLtJ_T0003122.1 MGP_NODShiLtJ_G0002895.1 mouse_genomes_project 11 60867905 61207771 + antisense antisense MGP_NODShiLtJ_T0012580.1 MGP_NODShiLtJ_G0010688.1 mouse_genomes_project 11 93269979 93270437 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009595.1 MGP_NODShiLtJ_G0007728.1 mouse_genomes_project 11 65758111 65758177 - Mir6922 miRNA miRNA MGP_NODShiLtJ_T0029593.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75012746 75020448 + Myh10 protein_coding processed_transcript MGP_NODShiLtJ_T0029594.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75013102 75144938 + MGP_NODShiLtJ_P0029594 Myh10 protein_coding protein_coding MGP_NODShiLtJ_T0029595.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75013265 75020607 + Myh10 protein_coding processed_transcript MGP_NODShiLtJ_T0029596.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75013268 75071240 + MGP_NODShiLtJ_P0029596 Myh10 protein_coding protein_coding MGP_NODShiLtJ_T0029597.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75013299 75144918 + MGP_NODShiLtJ_P0029597 Myh10 protein_coding protein_coding MGP_NODShiLtJ_T0029598.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75013341 75095248 + Myh10 protein_coding retained_intron MGP_NODShiLtJ_T0029599.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75013503 75144930 + MGP_NODShiLtJ_P0029599 Myh10 protein_coding protein_coding MGP_NODShiLtJ_T0029600.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75109036 75115679 + Myh10 protein_coding processed_transcript MGP_NODShiLtJ_T0029601.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75137779 75139372 + Myh10 protein_coding processed_transcript MGP_NODShiLtJ_T0029602.1 MGP_NODShiLtJ_G0018353.1 mouse_genomes_project 11 75140714 75144850 + Myh10 protein_coding processed_transcript MGP_NODShiLtJ_T0012351.1 MGP_NODShiLtJ_G0010459.1 mouse_genomes_project 11 3632655 3633044 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031378.1 MGP_NODShiLtJ_G0018782.1 mouse_genomes_project 11 97757776 97759471 - MGP_NODShiLtJ_P0031378 Nog protein_coding protein_coding MGP_NODShiLtJ_T0006296.1 MGP_NODShiLtJ_G0005245.1 mouse_genomes_project 11 125910420 125951649 - 4932435O22Rik lincRNA lincRNA MGP_NODShiLtJ_T0006297.1 MGP_NODShiLtJ_G0005245.1 mouse_genomes_project 11 125910658 125920685 - 4932435O22Rik lincRNA lincRNA MGP_NODShiLtJ_T0031469.1 MGP_NODShiLtJ_G0018804.1 mouse_genomes_project 11 103571528 103583119 + MGP_NODShiLtJ_P0031469 Ankrd40 protein_coding protein_coding MGP_NODShiLtJ_T0031470.1 MGP_NODShiLtJ_G0018804.1 mouse_genomes_project 11 103571528 103585456 + MGP_NODShiLtJ_P0031470 Ankrd40 protein_coding protein_coding MGP_NODShiLtJ_T0031471.1 MGP_NODShiLtJ_G0018804.1 mouse_genomes_project 11 103581899 103583758 + Ankrd40 protein_coding retained_intron MGP_NODShiLtJ_T0029051.1 MGP_NODShiLtJ_G0018222.1 mouse_genomes_project 11 64181557 64184312 + MGP_NODShiLtJ_P0029051 protein_coding protein_coding MGP_NODShiLtJ_T0099928.1 MGP_NODShiLtJ_G0038322.1 mouse_genomes_project 11 64032877 64033009 + Gm22599 snoRNA snoRNA MGP_NODShiLtJ_T0027640.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2086971 2119130 - MGP_NODShiLtJ_P0027640 Ewsr1 protein_coding protein_coding MGP_NODShiLtJ_T0027641.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2086980 2118931 - MGP_NODShiLtJ_P0027641 Ewsr1 protein_coding protein_coding MGP_NODShiLtJ_T0027642.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2087179 2118906 - MGP_NODShiLtJ_P0027642 Ewsr1 protein_coding protein_coding MGP_NODShiLtJ_T0027643.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2087256 2089489 - Ewsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0027644.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2089287 2090880 - Ewsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0027645.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2089766 2099409 - Ewsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0027646.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2090076 2098402 - Ewsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0027647.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2090179 2099780 - Ewsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0027648.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2090179 2102221 - Ewsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0027649.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2100298 2118930 - MGP_NODShiLtJ_P0027649 Ewsr1 protein_coding protein_coding MGP_NODShiLtJ_T0027650.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2101902 2105921 - Ewsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0027651.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2110343 2118960 - MGP_NODShiLtJ_P0027651 Ewsr1 protein_coding protein_coding MGP_NODShiLtJ_T0027652.1 MGP_NODShiLtJ_G0017853.1 mouse_genomes_project 11 2113416 2118931 - Ewsr1 protein_coding processed_transcript MGP_NODShiLtJ_T0031219.1 MGP_NODShiLtJ_G0018741.1 mouse_genomes_project 11 94736525 94847692 - MGP_NODShiLtJ_P0031219 Vmp1 protein_coding protein_coding MGP_NODShiLtJ_T0031220.1 MGP_NODShiLtJ_G0018741.1 mouse_genomes_project 11 94737590 94758972 - Vmp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031221.1 MGP_NODShiLtJ_G0018741.1 mouse_genomes_project 11 94737680 94739649 - Vmp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031222.1 MGP_NODShiLtJ_G0018741.1 mouse_genomes_project 11 94737929 94739536 - Vmp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031223.1 MGP_NODShiLtJ_G0018741.1 mouse_genomes_project 11 94737932 94759004 - Vmp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031224.1 MGP_NODShiLtJ_G0018741.1 mouse_genomes_project 11 94803627 94827754 - Vmp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031225.1 MGP_NODShiLtJ_G0018741.1 mouse_genomes_project 11 94828734 94847677 - Vmp1 protein_coding processed_transcript MGP_NODShiLtJ_T0031226.1 MGP_NODShiLtJ_G0018741.1 mouse_genomes_project 11 94828834 94835387 - MGP_NODShiLtJ_P0031226 Vmp1 protein_coding protein_coding MGP_NODShiLtJ_T0032354.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111699979 111707300 + MGP_NODShiLtJ_P0032354 Nbr1 protein_coding protein_coding MGP_NODShiLtJ_T0032355.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111700603 111732913 + MGP_NODShiLtJ_P0032355 Nbr1 protein_coding protein_coding MGP_NODShiLtJ_T0032356.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111700603 111732913 + MGP_NODShiLtJ_P0032356 Nbr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032357.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111700604 111732912 + MGP_NODShiLtJ_P0032357 Nbr1 protein_coding protein_coding MGP_NODShiLtJ_T0032358.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111700612 111719508 + Nbr1 protein_coding processed_transcript MGP_NODShiLtJ_T0032359.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111700627 111732913 + MGP_NODShiLtJ_P0032359 Nbr1 protein_coding protein_coding MGP_NODShiLtJ_T0032360.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111700646 111707299 + MGP_NODShiLtJ_P0032360 Nbr1 protein_coding protein_coding MGP_NODShiLtJ_T0032361.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111703619 111707316 + MGP_NODShiLtJ_P0032361 Nbr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032362.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111703925 111731974 + MGP_NODShiLtJ_P0032362 Nbr1 protein_coding protein_coding MGP_NODShiLtJ_T0032363.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111707272 111707335 + Nbr1 protein_coding misc_RNA MGP_NODShiLtJ_T0032364.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111709546 111716507 + Nbr1 protein_coding retained_intron MGP_NODShiLtJ_T0032365.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111714826 111732913 + MGP_NODShiLtJ_P0032365 Nbr1 protein_coding protein_coding MGP_NODShiLtJ_T0032366.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111719261 111720371 + Nbr1 protein_coding retained_intron MGP_NODShiLtJ_T0032367.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111719654 111720380 + Nbr1 protein_coding processed_transcript MGP_NODShiLtJ_T0032368.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111723194 111726184 + Nbr1 protein_coding retained_intron MGP_NODShiLtJ_T0032369.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111726074 111727599 + Nbr1 protein_coding retained_intron MGP_NODShiLtJ_T0032370.1 MGP_NODShiLtJ_G0019060.1 mouse_genomes_project 11 111728791 111731750 + Nbr1 protein_coding retained_intron MGP_NODShiLtJ_T0030485.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82691836 82703487 + MGP_NODShiLtJ_P0030485 Slc43a2 protein_coding protein_coding MGP_NODShiLtJ_T0030486.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82691840 82738854 + MGP_NODShiLtJ_P0030486 Slc43a2 protein_coding protein_coding MGP_NODShiLtJ_T0030487.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82691840 82735215 + MGP_NODShiLtJ_P0030487 Slc43a2 protein_coding protein_coding MGP_NODShiLtJ_T0030488.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82691885 82705941 + MGP_NODShiLtJ_P0030488 Slc43a2 protein_coding protein_coding MGP_NODShiLtJ_T0030489.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82692254 82738849 + MGP_NODShiLtJ_P0030489 Slc43a2 protein_coding protein_coding MGP_NODShiLtJ_T0030490.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82692280 82705994 + MGP_NODShiLtJ_P0030490 Slc43a2 protein_coding protein_coding MGP_NODShiLtJ_T0030491.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82698164 82705928 + Slc43a2 protein_coding processed_transcript MGP_NODShiLtJ_T0030492.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82720958 82727211 + Slc43a2 protein_coding retained_intron MGP_NODShiLtJ_T0030493.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82726150 82731516 + Slc43a2 protein_coding processed_transcript MGP_NODShiLtJ_T0030494.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82726846 82733744 + Slc43a2 protein_coding retained_intron MGP_NODShiLtJ_T0030495.1 MGP_NODShiLtJ_G0018565.1 mouse_genomes_project 11 82726959 82733122 + Slc43a2 protein_coding processed_transcript MGP_NODShiLtJ_T0099913.1 MGP_NODShiLtJ_G0038307.1 mouse_genomes_project 11 26079554 26079684 + Gm23514 snoRNA snoRNA MGP_NODShiLtJ_T0031589.1 MGP_NODShiLtJ_G0018832.1 mouse_genomes_project 11 104793823 104797265 + MGP_NODShiLtJ_P0031589 Slc35b1 protein_coding protein_coding MGP_NODShiLtJ_T0031590.1 MGP_NODShiLtJ_G0018832.1 mouse_genomes_project 11 104793957 104801159 + MGP_NODShiLtJ_P0031590 Slc35b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0031591.1 MGP_NODShiLtJ_G0018832.1 mouse_genomes_project 11 104793968 104801160 + MGP_NODShiLtJ_P0031591 Slc35b1 protein_coding protein_coding MGP_NODShiLtJ_T0031592.1 MGP_NODShiLtJ_G0018832.1 mouse_genomes_project 11 104793972 104795686 + Slc35b1 protein_coding retained_intron MGP_NODShiLtJ_T0031593.1 MGP_NODShiLtJ_G0018832.1 mouse_genomes_project 11 104799359 104800028 + Slc35b1 protein_coding retained_intron MGP_NODShiLtJ_T0032029.1 MGP_NODShiLtJ_G0018949.1 mouse_genomes_project 11 109428055 109428355 - MGP_NODShiLtJ_P0032029 Gm11939 protein_coding protein_coding MGP_NODShiLtJ_T0012639.1 MGP_NODShiLtJ_G0010747.1 mouse_genomes_project 11 116460901 116461910 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0033013.1 MGP_NODShiLtJ_G0019193.1 mouse_genomes_project 11 120755549 120797212 - MGP_NODShiLtJ_P0033013 1700012B07Rik protein_coding protein_coding MGP_NODShiLtJ_T0033014.1 MGP_NODShiLtJ_G0019193.1 mouse_genomes_project 11 120759455 120797188 - MGP_NODShiLtJ_P0033014 1700012B07Rik protein_coding protein_coding MGP_NODShiLtJ_T0033015.1 MGP_NODShiLtJ_G0019193.1 mouse_genomes_project 11 120759496 120781968 - MGP_NODShiLtJ_P0033015 1700012B07Rik protein_coding protein_coding MGP_NODShiLtJ_T0029296.1 MGP_NODShiLtJ_G0018287.1 mouse_genomes_project 11 66969177 67011541 - MGP_NODShiLtJ_P0029296 Slc47a2 protein_coding protein_coding MGP_NODShiLtJ_T0029297.1 MGP_NODShiLtJ_G0018287.1 mouse_genomes_project 11 66972226 67011531 - MGP_NODShiLtJ_P0029297 Slc47a2 protein_coding protein_coding MGP_NODShiLtJ_T0029298.1 MGP_NODShiLtJ_G0018287.1 mouse_genomes_project 11 67004789 67011265 - Slc47a2 protein_coding processed_transcript MGP_NODShiLtJ_T0029461.1 MGP_NODShiLtJ_G0018315.1 mouse_genomes_project 11 68719273 68734845 + MGP_NODShiLtJ_P0029461 Tvp23b protein_coding protein_coding MGP_NODShiLtJ_T0029462.1 MGP_NODShiLtJ_G0018315.1 mouse_genomes_project 11 68719308 68731703 + Tvp23b protein_coding processed_transcript MGP_NODShiLtJ_T0029463.1 MGP_NODShiLtJ_G0018315.1 mouse_genomes_project 11 68719432 68725006 + Tvp23b protein_coding processed_transcript MGP_NODShiLtJ_T0029464.1 MGP_NODShiLtJ_G0018315.1 mouse_genomes_project 11 68723467 68755385 + Tvp23b protein_coding processed_transcript MGP_NODShiLtJ_T0032481.1 MGP_NODShiLtJ_G0019082.1 mouse_genomes_project 11 112507544 112511849 + MGP_NODShiLtJ_P0032481 Tmub2 protein_coding protein_coding MGP_NODShiLtJ_T0032482.1 MGP_NODShiLtJ_G0019082.1 mouse_genomes_project 11 112507552 112510823 + Tmub2 protein_coding processed_transcript MGP_NODShiLtJ_T0032483.1 MGP_NODShiLtJ_G0019082.1 mouse_genomes_project 11 112507552 112511849 + MGP_NODShiLtJ_P0032483 Tmub2 protein_coding protein_coding MGP_NODShiLtJ_T0032484.1 MGP_NODShiLtJ_G0019082.1 mouse_genomes_project 11 112507564 112510003 + Tmub2 protein_coding processed_transcript MGP_NODShiLtJ_T0032485.1 MGP_NODShiLtJ_G0019082.1 mouse_genomes_project 11 112507809 112511849 + MGP_NODShiLtJ_P0032485 Tmub2 protein_coding protein_coding MGP_NODShiLtJ_T0009660.1 MGP_NODShiLtJ_G0007793.1 mouse_genomes_project 11 112454940 112455051 - Mir8101 miRNA miRNA MGP_NODShiLtJ_T0012576.1 MGP_NODShiLtJ_G0010684.1 mouse_genomes_project 11 91698694 91699308 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006315.1 MGP_NODShiLtJ_G0005260.1 mouse_genomes_project 11 132017893 132021457 + Gm11766 lincRNA lincRNA MGP_NODShiLtJ_T0098718.1 MGP_NODShiLtJ_G0037112.1 mouse_genomes_project 11 104310271 104310396 + Gm22456 snRNA snRNA MGP_NODShiLtJ_T0098722.1 MGP_NODShiLtJ_G0037116.1 mouse_genomes_project 11 108211613 108211747 - Gm25106 snRNA snRNA MGP_NODShiLtJ_T0033110.1 MGP_NODShiLtJ_G0019215.1 mouse_genomes_project 11 126343910 126348561 - Btbd17 protein_coding processed_transcript MGP_NODShiLtJ_T0033111.1 MGP_NODShiLtJ_G0019215.1 mouse_genomes_project 11 126343910 126348598 - Btbd17 protein_coding processed_transcript MGP_NODShiLtJ_T0033112.1 MGP_NODShiLtJ_G0019215.1 mouse_genomes_project 11 126343910 126348585 - MGP_NODShiLtJ_P0033112 Btbd17 protein_coding protein_coding MGP_NODShiLtJ_T0033113.1 MGP_NODShiLtJ_G0019215.1 mouse_genomes_project 11 126344799 126348633 - Btbd17 protein_coding processed_transcript MGP_NODShiLtJ_T0033114.1 MGP_NODShiLtJ_G0019215.1 mouse_genomes_project 11 126344978 126348587 - Btbd17 protein_coding processed_transcript MGP_NODShiLtJ_T0033115.1 MGP_NODShiLtJ_G0019215.1 mouse_genomes_project 11 126345125 126348561 - Btbd17 protein_coding processed_transcript MGP_NODShiLtJ_T0033116.1 MGP_NODShiLtJ_G0019215.1 mouse_genomes_project 11 126345162 126348580 - Btbd17 protein_coding processed_transcript MGP_NODShiLtJ_T0031015.1 MGP_NODShiLtJ_G0018690.1 mouse_genomes_project 11 91021775 91039199 + MGP_NODShiLtJ_P0031015 Slfn4 protein_coding protein_coding MGP_NODShiLtJ_T0031016.1 MGP_NODShiLtJ_G0018690.1 mouse_genomes_project 11 91021783 91039027 + MGP_NODShiLtJ_P0031016 Slfn4 protein_coding protein_coding MGP_NODShiLtJ_T0012485.1 MGP_NODShiLtJ_G0010593.1 mouse_genomes_project 11 58822953 58824190 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012567.1 MGP_NODShiLtJ_G0010675.1 mouse_genomes_project 11 87434244 87434391 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003263.1 MGP_NODShiLtJ_G0003009.1 mouse_genomes_project 11 116657114 116657816 - Gm11646 antisense antisense MGP_NODShiLtJ_T0012498.1 MGP_NODShiLtJ_G0010606.1 mouse_genomes_project 11 63153258 63153549 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099964.1 MGP_NODShiLtJ_G0038358.1 mouse_genomes_project 11 117141342 117141477 + Gm22711 snoRNA snoRNA MGP_NODShiLtJ_T0032751.1 MGP_NODShiLtJ_G0019135.1 mouse_genomes_project 11 115632981 115633350 + MGP_NODShiLtJ_P0032751 Gm10842 protein_coding protein_coding MGP_NODShiLtJ_T0003310.1 MGP_NODShiLtJ_G0003047.1 mouse_genomes_project 11 132617866 132620856 - Gm11788 antisense antisense MGP_NODShiLtJ_T0009644.1 MGP_NODShiLtJ_G0007777.1 mouse_genomes_project 11 105868704 105868814 + Mir10a miRNA miRNA MGP_NODShiLtJ_T0012408.1 MGP_NODShiLtJ_G0010516.1 mouse_genomes_project 11 24807479 24809004 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012569.1 MGP_NODShiLtJ_G0010677.1 mouse_genomes_project 11 88714921 88716899 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003267.1 MGP_NODShiLtJ_G0003013.1 mouse_genomes_project 11 117719416 117719643 + antisense antisense MGP_NODShiLtJ_T0029105.1 MGP_NODShiLtJ_G0018244.1 mouse_genomes_project 11 64705355 64706258 - MGP_NODShiLtJ_P0029105 Arf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030247.1 MGP_NODShiLtJ_G0018488.1 mouse_genomes_project 11 79173259 79183673 + Mybbp1a protein_coding retained_intron MGP_NODShiLtJ_T0030248.1 MGP_NODShiLtJ_G0018488.1 mouse_genomes_project 11 79173259 79183673 + MGP_NODShiLtJ_P0030248 Mybbp1a protein_coding protein_coding MGP_NODShiLtJ_T0030249.1 MGP_NODShiLtJ_G0018488.1 mouse_genomes_project 11 79173261 79183134 + Mybbp1a protein_coding retained_intron MGP_NODShiLtJ_T0030250.1 MGP_NODShiLtJ_G0018488.1 mouse_genomes_project 11 79173281 79175478 + Mybbp1a protein_coding retained_intron MGP_NODShiLtJ_T0030251.1 MGP_NODShiLtJ_G0018488.1 mouse_genomes_project 11 79175676 79176468 + Mybbp1a protein_coding retained_intron MGP_NODShiLtJ_T0030252.1 MGP_NODShiLtJ_G0018488.1 mouse_genomes_project 11 79180121 79182910 + Mybbp1a protein_coding retained_intron MGP_NODShiLtJ_T0030253.1 MGP_NODShiLtJ_G0018488.1 mouse_genomes_project 11 79181542 79182611 + Mybbp1a protein_coding retained_intron MGP_NODShiLtJ_T0030254.1 MGP_NODShiLtJ_G0018488.1 mouse_genomes_project 11 79182478 79183007 + Mybbp1a protein_coding retained_intron MGP_NODShiLtJ_T0009682.1 MGP_NODShiLtJ_G0007815.1 mouse_genomes_project 11 132096098 132096185 + Mir3065 miRNA miRNA MGP_NODShiLtJ_T0009637.1 MGP_NODShiLtJ_G0007770.1 mouse_genomes_project 11 95294256 95294342 + Mir301 miRNA miRNA MGP_NODShiLtJ_T0027769.1 MGP_NODShiLtJ_G0017882.1 mouse_genomes_project 11 3714840 3729245 - MGP_NODShiLtJ_P0027769 Myo1g protein_coding protein_coding MGP_NODShiLtJ_T0027770.1 MGP_NODShiLtJ_G0017882.1 mouse_genomes_project 11 3714966 3729184 - MGP_NODShiLtJ_P0027770 Myo1g protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027771.1 MGP_NODShiLtJ_G0017882.1 mouse_genomes_project 11 3716161 3716978 - Myo1g protein_coding retained_intron MGP_NODShiLtJ_T0027772.1 MGP_NODShiLtJ_G0017882.1 mouse_genomes_project 11 3721256 3729245 - Myo1g protein_coding retained_intron MGP_NODShiLtJ_T0027773.1 MGP_NODShiLtJ_G0017882.1 mouse_genomes_project 11 3722795 3723793 - Myo1g protein_coding retained_intron MGP_NODShiLtJ_T0027774.1 MGP_NODShiLtJ_G0017882.1 mouse_genomes_project 11 3726284 3729252 - MGP_NODShiLtJ_P0027774 Myo1g protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0027775.1 MGP_NODShiLtJ_G0017882.1 mouse_genomes_project 11 3727333 3727791 - MGP_NODShiLtJ_P0027775 Myo1g protein_coding protein_coding MGP_NODShiLtJ_T0012620.1 MGP_NODShiLtJ_G0010728.1 mouse_genomes_project 11 110221326 110221682 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006109.1 MGP_NODShiLtJ_G0005097.1 mouse_genomes_project 11 4594027 4615004 - Gm11986 lincRNA lincRNA MGP_NODShiLtJ_T0017113.1 MGP_NODShiLtJ_G0015067.1 mouse_genomes_project 11 106009210 106025366 - Gm11529 processed_transcript processed_transcript MGP_NODShiLtJ_T0032347.1 MGP_NODShiLtJ_G0019059.1 mouse_genomes_project 11 111620051 111698243 - MGP_NODShiLtJ_P0032347 Brca1 protein_coding protein_coding MGP_NODShiLtJ_T0032348.1 MGP_NODShiLtJ_G0019059.1 mouse_genomes_project 11 111627545 111640255 - Brca1 protein_coding retained_intron MGP_NODShiLtJ_T0032349.1 MGP_NODShiLtJ_G0019059.1 mouse_genomes_project 11 111645459 111656629 - Brca1 protein_coding retained_intron MGP_NODShiLtJ_T0032350.1 MGP_NODShiLtJ_G0019059.1 mouse_genomes_project 11 111658362 111659028 - MGP_NODShiLtJ_P0032350 Brca1 protein_coding protein_coding MGP_NODShiLtJ_T0032351.1 MGP_NODShiLtJ_G0019059.1 mouse_genomes_project 11 111658376 111659376 - Brca1 protein_coding processed_transcript MGP_NODShiLtJ_T0032352.1 MGP_NODShiLtJ_G0019059.1 mouse_genomes_project 11 111659676 111698319 - MGP_NODShiLtJ_P0032352 Brca1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032353.1 MGP_NODShiLtJ_G0019059.1 mouse_genomes_project 11 111666637 111697946 - MGP_NODShiLtJ_P0032353 Brca1 protein_coding protein_coding MGP_NODShiLtJ_T0011190.1 MGP_NODShiLtJ_G0009323.1 mouse_genomes_project 11 58595858 58596168 + Gm22275 misc_RNA misc_RNA MGP_NODShiLtJ_T0033955.1 MGP_NODShiLtJ_G0019381.1 mouse_genomes_project 11 132865474 132867974 + MGP_NODShiLtJ_P0033955 Rac3 protein_coding protein_coding MGP_NODShiLtJ_T0033956.1 MGP_NODShiLtJ_G0019381.1 mouse_genomes_project 11 132865577 132867611 + MGP_NODShiLtJ_P0033956 Rac3 protein_coding protein_coding MGP_NODShiLtJ_T0033957.1 MGP_NODShiLtJ_G0019381.1 mouse_genomes_project 11 132866018 132867570 + Rac3 protein_coding processed_transcript MGP_NODShiLtJ_T0009563.1 MGP_NODShiLtJ_G0007696.1 mouse_genomes_project 11 3650306 3650359 - Gm22123 miRNA miRNA MGP_NODShiLtJ_T0012605.1 MGP_NODShiLtJ_G0010713.1 mouse_genomes_project 11 106370643 106371030 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0031740.1 MGP_NODShiLtJ_G0018874.1 mouse_genomes_project 11 106693002 106712624 - MGP_NODShiLtJ_P0031740 Tbx21 protein_coding protein_coding MGP_NODShiLtJ_T0003165.1 MGP_NODShiLtJ_G0002931.1 mouse_genomes_project 11 75661322 75662649 + Cntrobos antisense antisense MGP_NODShiLtJ_T0006238.1 MGP_NODShiLtJ_G0005203.1 mouse_genomes_project 11 95252834 95253536 - Gm11479 lincRNA lincRNA MGP_NODShiLtJ_T0033687.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131256339 131259469 + Ccdc40 protein_coding processed_transcript MGP_NODShiLtJ_T0033688.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131256345 131259385 + Ccdc40 protein_coding processed_transcript MGP_NODShiLtJ_T0033689.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131256869 131295986 + MGP_NODShiLtJ_P0033689 Ccdc40 protein_coding protein_coding MGP_NODShiLtJ_T0033690.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131256874 131297534 + MGP_NODShiLtJ_P0033690 Ccdc40 protein_coding protein_coding MGP_NODShiLtJ_T0033691.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131266445 131284898 + Ccdc40 protein_coding retained_intron MGP_NODShiLtJ_T0033692.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131286639 131297456 + Ccdc40 protein_coding retained_intron MGP_NODShiLtJ_T0033693.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131292012 131298256 + Ccdc40 protein_coding processed_transcript MGP_NODShiLtJ_T0033694.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131292851 131296206 + Ccdc40 protein_coding retained_intron MGP_NODShiLtJ_T0033695.1 MGP_NODShiLtJ_G0019333.1 mouse_genomes_project 11 131295957 131297326 + Ccdc40 protein_coding retained_intron MGP_NODShiLtJ_T0012650.1 MGP_NODShiLtJ_G0010758.1 mouse_genomes_project 11 123303784 123304563 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097745.1 MGP_NODShiLtJ_G0036157.1 mouse_genomes_project 11 64700165 64700643 - pseudogene pseudogene MGP_NODShiLtJ_T0031668.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106025436 106332071 + MGP_NODShiLtJ_P0031668 Skap1 protein_coding protein_coding MGP_NODShiLtJ_T0031669.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106025436 106332260 + MGP_NODShiLtJ_P0031669 Skap1 protein_coding protein_coding MGP_NODShiLtJ_T0031670.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106025443 106058342 + MGP_NODShiLtJ_P0031670 Skap1 protein_coding protein_coding MGP_NODShiLtJ_T0031671.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106025467 106301005 + Skap1 protein_coding retained_intron MGP_NODShiLtJ_T0031672.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106025470 106332071 + MGP_NODShiLtJ_P0031672 Skap1 protein_coding protein_coding MGP_NODShiLtJ_T0031673.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106025476 106147806 + MGP_NODShiLtJ_P0031673 Skap1 protein_coding protein_coding MGP_NODShiLtJ_T0031674.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106025524 106247044 + MGP_NODShiLtJ_P0031674 Skap1 protein_coding protein_coding MGP_NODShiLtJ_T0031675.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106025548 106332074 + MGP_NODShiLtJ_P0031675 Skap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031676.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106048485 106058342 + Skap1 protein_coding processed_transcript MGP_NODShiLtJ_T0031677.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106054577 106273432 + Skap1 protein_coding retained_intron MGP_NODShiLtJ_T0031678.1 MGP_NODShiLtJ_G0018860.1 mouse_genomes_project 11 106277235 106282098 + Skap1 protein_coding retained_intron MGP_NODShiLtJ_T0012503.1 MGP_NODShiLtJ_G0010611.1 mouse_genomes_project 11 63895950 63896234 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032400.1 MGP_NODShiLtJ_G0019066.1 mouse_genomes_project 11 112077139 112095173 - MGP_NODShiLtJ_P0032400 Meox1 protein_coding protein_coding MGP_NODShiLtJ_T0028614.1 MGP_NODShiLtJ_G0018097.1 mouse_genomes_project 11 54755319 54757322 - MGP_NODShiLtJ_P0028614 protein_coding protein_coding MGP_NODShiLtJ_T0028615.1 MGP_NODShiLtJ_G0018097.1 mouse_genomes_project 11 54755322 54757383 - MGP_NODShiLtJ_P0028615 protein_coding protein_coding MGP_NODShiLtJ_T0028616.1 MGP_NODShiLtJ_G0018097.1 mouse_genomes_project 11 54755322 54757467 - MGP_NODShiLtJ_P0028616 protein_coding protein_coding MGP_NODShiLtJ_T0011202.1 MGP_NODShiLtJ_G0009335.1 mouse_genomes_project 11 105731510 105731646 - Gm27605 misc_RNA misc_RNA MGP_NODShiLtJ_T0030925.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029031 88034991 + Psmd11 protein_coding retained_intron MGP_NODShiLtJ_T0030926.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029039 88076233 + MGP_NODShiLtJ_P0030926 Psmd11 protein_coding protein_coding MGP_NODShiLtJ_T0030927.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029041 88077780 + MGP_NODShiLtJ_P0030927 Psmd11 protein_coding protein_coding MGP_NODShiLtJ_T0030928.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029060 88076630 + Psmd11 protein_coding retained_intron MGP_NODShiLtJ_T0030929.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029062 88049239 + MGP_NODShiLtJ_P0030929 Psmd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030930.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029081 88064653 + MGP_NODShiLtJ_P0030930 Psmd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030931.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029081 88077783 + MGP_NODShiLtJ_P0030931 Psmd11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0030932.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029102 88074233 + MGP_NODShiLtJ_P0030932 Psmd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030933.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029102 88075863 + MGP_NODShiLtJ_P0030933 Psmd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030934.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029102 88059847 + MGP_NODShiLtJ_P0030934 Psmd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030935.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88029106 88060390 + MGP_NODShiLtJ_P0030935 Psmd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030936.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88030287 88060394 + MGP_NODShiLtJ_P0030936 Psmd11 protein_coding protein_coding MGP_NODShiLtJ_T0030937.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88059972 88076199 + MGP_NODShiLtJ_P0030937 Psmd11 protein_coding protein_coding MGP_NODShiLtJ_T0030938.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88064670 88076038 + MGP_NODShiLtJ_P0030938 Psmd11 protein_coding protein_coding MGP_NODShiLtJ_T0030939.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88066571 88077780 + MGP_NODShiLtJ_P0030939 Psmd11 protein_coding protein_coding MGP_NODShiLtJ_T0030940.1 MGP_NODShiLtJ_G0018662.1 mouse_genomes_project 11 88066575 88075965 + MGP_NODShiLtJ_P0030940 Psmd11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028599.1 MGP_NODShiLtJ_G0018094.1 mouse_genomes_project 11 54687159 54691064 + 3010026O09Rik protein_coding processed_transcript MGP_NODShiLtJ_T0028600.1 MGP_NODShiLtJ_G0018094.1 mouse_genomes_project 11 54687564 54713926 + MGP_NODShiLtJ_P0028600 3010026O09Rik protein_coding protein_coding MGP_NODShiLtJ_T0028601.1 MGP_NODShiLtJ_G0018094.1 mouse_genomes_project 11 54687622 54710855 + MGP_NODShiLtJ_P0028601 3010026O09Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0028679.1 MGP_NODShiLtJ_G0018112.1 mouse_genomes_project 11 55535886 55536834 + MGP_NODShiLtJ_P0028679 Olfr1378 protein_coding protein_coding MGP_NODShiLtJ_T0030404.1 MGP_NODShiLtJ_G0018546.1 mouse_genomes_project 11 81885091 81933743 + MGP_NODShiLtJ_P0030404 Mettl16 protein_coding protein_coding MGP_NODShiLtJ_T0030405.1 MGP_NODShiLtJ_G0018546.1 mouse_genomes_project 11 81885091 81944356 + MGP_NODShiLtJ_P0030405 Mettl16 protein_coding protein_coding MGP_NODShiLtJ_T0030406.1 MGP_NODShiLtJ_G0018546.1 mouse_genomes_project 11 81885177 81887883 + MGP_NODShiLtJ_P0030406 Mettl16 protein_coding protein_coding MGP_NODShiLtJ_T0030407.1 MGP_NODShiLtJ_G0018546.1 mouse_genomes_project 11 81885186 81933743 + MGP_NODShiLtJ_P0030407 Mettl16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0030408.1 MGP_NODShiLtJ_G0018546.1 mouse_genomes_project 11 81919087 81932795 + Mettl16 protein_coding retained_intron MGP_NODShiLtJ_T0030409.1 MGP_NODShiLtJ_G0018546.1 mouse_genomes_project 11 81924403 81933360 + Mettl16 protein_coding processed_transcript MGP_NODShiLtJ_T0000823.1 MGP_NODShiLtJ_G0000753.1 mouse_genomes_project 11 18417702 18418569 - TEC TEC MGP_NODShiLtJ_T0006125.1 MGP_NODShiLtJ_G0005112.1 mouse_genomes_project 11 22697354 22700118 - Gm12055 lincRNA lincRNA MGP_NODShiLtJ_T0029091.1 MGP_NODShiLtJ_G0018240.1 mouse_genomes_project 11 64664684 64671988 - MGP_NODShiLtJ_P0029091 Gjc2 protein_coding protein_coding MGP_NODShiLtJ_T0029092.1 MGP_NODShiLtJ_G0018240.1 mouse_genomes_project 11 64664684 64672375 - MGP_NODShiLtJ_P0029092 Gjc2 protein_coding protein_coding MGP_NODShiLtJ_T0033574.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129688852 129702480 - MGP_NODShiLtJ_P0033574 Tmc6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033575.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129688852 129703471 - MGP_NODShiLtJ_P0033575 Tmc6 protein_coding protein_coding MGP_NODShiLtJ_T0033576.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129688924 129691939 - Tmc6 protein_coding retained_intron MGP_NODShiLtJ_T0033577.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129692941 129695890 - MGP_NODShiLtJ_P0033577 Tmc6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0033578.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129698194 129703453 - MGP_NODShiLtJ_P0033578 Tmc6 protein_coding protein_coding MGP_NODShiLtJ_T0033579.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129698554 129702482 - MGP_NODShiLtJ_P0033579 Tmc6 protein_coding protein_coding MGP_NODShiLtJ_T0033580.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129701573 129703776 - MGP_NODShiLtJ_P0033580 Tmc6 protein_coding protein_coding MGP_NODShiLtJ_T0033581.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129701769 129705029 - MGP_NODShiLtJ_P0033581 Tmc6 protein_coding protein_coding MGP_NODShiLtJ_T0033582.1 MGP_NODShiLtJ_G0019306.1 mouse_genomes_project 11 129702023 129703490 - MGP_NODShiLtJ_P0033582 Tmc6 protein_coding protein_coding MGP_NODShiLtJ_T0012584.1 MGP_NODShiLtJ_G0010692.1 mouse_genomes_project 11 95258478 95258949 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098687.1 MGP_NODShiLtJ_G0037081.1 mouse_genomes_project 11 67002649 67002756 + Gm25929 snRNA snRNA MGP_NODShiLtJ_T0009594.1 MGP_NODShiLtJ_G0007727.1 mouse_genomes_project 11 65756387 65756467 - Mir6921 miRNA miRNA MGP_NODShiLtJ_T0009606.1 MGP_NODShiLtJ_G0007739.1 mouse_genomes_project 11 76069999 76070082 + Mir1934 miRNA miRNA MGP_NODShiLtJ_T0003162.1 MGP_NODShiLtJ_G0002928.1 mouse_genomes_project 11 74472212 74476173 - C78197 antisense antisense MGP_NODShiLtJ_T0028741.1 MGP_NODShiLtJ_G0018130.1 mouse_genomes_project 11 56689715 56706455 - MGP_NODShiLtJ_P0028741 Ube2b protein_coding protein_coding MGP_NODShiLtJ_T0028742.1 MGP_NODShiLtJ_G0018130.1 mouse_genomes_project 11 56690885 56706733 - MGP_NODShiLtJ_P0028742 Ube2b protein_coding protein_coding MGP_NODShiLtJ_T0028743.1 MGP_NODShiLtJ_G0018130.1 mouse_genomes_project 11 56702262 56706450 - Ube2b protein_coding processed_transcript MGP_NODShiLtJ_T0028744.1 MGP_NODShiLtJ_G0018130.1 mouse_genomes_project 11 56702338 56706733 - Ube2b protein_coding processed_transcript MGP_NODShiLtJ_T0017075.1 MGP_NODShiLtJ_G0015046.1 mouse_genomes_project 11 65253687 65260536 - 1700007J10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017076.1 MGP_NODShiLtJ_G0015046.1 mouse_genomes_project 11 65253687 65267916 - 1700007J10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0029732.1 MGP_NODShiLtJ_G0018380.1 mouse_genomes_project 11 75773080 75773918 + Naa38 protein_coding processed_transcript MGP_NODShiLtJ_T0029733.1 MGP_NODShiLtJ_G0018380.1 mouse_genomes_project 11 75773240 75774273 + MGP_NODShiLtJ_P0029733 Naa38 protein_coding protein_coding MGP_NODShiLtJ_T0029734.1 MGP_NODShiLtJ_G0018380.1 mouse_genomes_project 11 75773407 75774273 + Naa38 protein_coding processed_transcript MGP_NODShiLtJ_T0029735.1 MGP_NODShiLtJ_G0018380.1 mouse_genomes_project 11 75773711 75774273 + Naa38 protein_coding processed_transcript MGP_NODShiLtJ_T0028863.1 MGP_NODShiLtJ_G0018163.1 mouse_genomes_project 11 59004588 59018605 - MGP_NODShiLtJ_P0028863 Pdlim4 protein_coding protein_coding MGP_NODShiLtJ_T0028864.1 MGP_NODShiLtJ_G0018163.1 mouse_genomes_project 11 59005581 59014459 - MGP_NODShiLtJ_P0028864 Pdlim4 protein_coding protein_coding MGP_NODShiLtJ_T0028865.1 MGP_NODShiLtJ_G0018163.1 mouse_genomes_project 11 59008613 59018664 - Pdlim4 protein_coding retained_intron MGP_NODShiLtJ_T0028866.1 MGP_NODShiLtJ_G0018163.1 mouse_genomes_project 11 59013385 59014231 - Pdlim4 protein_coding processed_transcript MGP_NODShiLtJ_T0012587.1 MGP_NODShiLtJ_G0010695.1 mouse_genomes_project 11 96238556 96238729 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030304.1 MGP_NODShiLtJ_G0018501.1 mouse_genomes_project 11 79951749 79964365 + MGP_NODShiLtJ_P0030304 P2rx5 protein_coding protein_coding MGP_NODShiLtJ_T0030305.1 MGP_NODShiLtJ_G0018501.1 mouse_genomes_project 11 79951913 79962178 + MGP_NODShiLtJ_P0030305 P2rx5 protein_coding protein_coding MGP_NODShiLtJ_T0030306.1 MGP_NODShiLtJ_G0018501.1 mouse_genomes_project 11 79951913 79962178 + MGP_NODShiLtJ_P0030306 P2rx5 protein_coding protein_coding MGP_NODShiLtJ_T0033989.1 MGP_NODShiLtJ_G0019388.1 mouse_genomes_project 11 132990500 133104447 - MGP_NODShiLtJ_P0033989 Ccdc57 protein_coding protein_coding MGP_NODShiLtJ_T0033990.1 MGP_NODShiLtJ_G0019388.1 mouse_genomes_project 11 132990513 133042599 - Ccdc57 protein_coding processed_transcript MGP_NODShiLtJ_T0033991.1 MGP_NODShiLtJ_G0019388.1 mouse_genomes_project 11 133042719 133054635 - Ccdc57 protein_coding processed_transcript MGP_NODShiLtJ_T0028882.1 MGP_NODShiLtJ_G0018165.1 mouse_genomes_project 11 59205396 59207814 - MGP_NODShiLtJ_P0028882 Csf2 protein_coding protein_coding MGP_NODShiLtJ_T0032690.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114148865 114297204 - MGP_NODShiLtJ_P0032690 Nsf protein_coding protein_coding MGP_NODShiLtJ_T0032691.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114150008 114154504 - Nsf protein_coding retained_intron MGP_NODShiLtJ_T0032692.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114150017 114151173 - Nsf protein_coding retained_intron MGP_NODShiLtJ_T0032693.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114176485 114203577 - Nsf protein_coding retained_intron MGP_NODShiLtJ_T0032694.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114191091 114203699 - Nsf protein_coding retained_intron MGP_NODShiLtJ_T0032695.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114215660 114297172 - Nsf protein_coding retained_intron MGP_NODShiLtJ_T0032696.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114246288 114297172 - Nsf protein_coding retained_intron MGP_NODShiLtJ_T0032697.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114247315 114278232 - MGP_NODShiLtJ_P0032697 Nsf protein_coding protein_coding MGP_NODShiLtJ_T0032698.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114247419 114264048 - Nsf protein_coding retained_intron MGP_NODShiLtJ_T0032699.1 MGP_NODShiLtJ_G0019123.1 mouse_genomes_project 11 114264044 114278232 - MGP_NODShiLtJ_P0032699 Nsf protein_coding protein_coding MGP_NODShiLtJ_T0003304.1 MGP_NODShiLtJ_G0003041.1 mouse_genomes_project 11 130071366 130074786 + Gm11738 antisense antisense MGP_NODShiLtJ_T0029061.1 MGP_NODShiLtJ_G0018229.1 mouse_genomes_project 11 64295962 64310755 + MGP_NODShiLtJ_P0029061 Gm12258 protein_coding protein_coding MGP_NODShiLtJ_T0029062.1 MGP_NODShiLtJ_G0018229.1 mouse_genomes_project 11 64296000 64300196 + Gm12258 protein_coding processed_transcript MGP_NODShiLtJ_T0033568.1 MGP_NODShiLtJ_G0019305.1 mouse_genomes_project 11 129570627 129685462 + MGP_NODShiLtJ_P0033568 Tnrc6c protein_coding protein_coding MGP_NODShiLtJ_T0033569.1 MGP_NODShiLtJ_G0019305.1 mouse_genomes_project 11 129570911 129685453 + Tnrc6c protein_coding retained_intron MGP_NODShiLtJ_T0033570.1 MGP_NODShiLtJ_G0019305.1 mouse_genomes_project 11 129571151 129685464 + MGP_NODShiLtJ_P0033570 Tnrc6c protein_coding protein_coding MGP_NODShiLtJ_T0033571.1 MGP_NODShiLtJ_G0019305.1 mouse_genomes_project 11 129643011 129684240 + MGP_NODShiLtJ_P0033571 Tnrc6c protein_coding protein_coding MGP_NODShiLtJ_T0033572.1 MGP_NODShiLtJ_G0019305.1 mouse_genomes_project 11 129664474 129671281 + Tnrc6c protein_coding retained_intron MGP_NODShiLtJ_T0033573.1 MGP_NODShiLtJ_G0019305.1 mouse_genomes_project 11 129671210 129673288 + Tnrc6c protein_coding retained_intron MGP_NODShiLtJ_T0032402.1 MGP_NODShiLtJ_G0019068.1 mouse_genomes_project 11 112178476 112194334 - MGP_NODShiLtJ_P0032402 Dusp3 protein_coding protein_coding MGP_NODShiLtJ_T0032403.1 MGP_NODShiLtJ_G0019068.1 mouse_genomes_project 11 112178476 112192122 - MGP_NODShiLtJ_P0032403 Dusp3 protein_coding protein_coding MGP_NODShiLtJ_T0032404.1 MGP_NODShiLtJ_G0019068.1 mouse_genomes_project 11 112178476 112190825 - MGP_NODShiLtJ_P0032404 Dusp3 protein_coding protein_coding MGP_NODShiLtJ_T0032405.1 MGP_NODShiLtJ_G0019068.1 mouse_genomes_project 11 112178476 112194334 - MGP_NODShiLtJ_P0032405 Dusp3 protein_coding protein_coding MGP_NODShiLtJ_T0032406.1 MGP_NODShiLtJ_G0019068.1 mouse_genomes_project 11 112180803 112189017 - MGP_NODShiLtJ_P0032406 Dusp3 protein_coding protein_coding MGP_NODShiLtJ_T0032407.1 MGP_NODShiLtJ_G0019068.1 mouse_genomes_project 11 112182050 112192101 - MGP_NODShiLtJ_P0032407 Dusp3 protein_coding protein_coding MGP_NODShiLtJ_T0032408.1 MGP_NODShiLtJ_G0019068.1 mouse_genomes_project 11 112187922 112192074 - MGP_NODShiLtJ_P0032408 Dusp3 protein_coding protein_coding MGP_NODShiLtJ_T0098738.1 MGP_NODShiLtJ_G0037132.1 mouse_genomes_project 11 130142676 130142771 - Gm24060 snRNA snRNA MGP_NODShiLtJ_T0032161.1 MGP_NODShiLtJ_G0019016.1 mouse_genomes_project 11 110647475 110671791 - MGP_NODShiLtJ_P0032161 Zfp385c protein_coding protein_coding MGP_NODShiLtJ_T0032162.1 MGP_NODShiLtJ_G0019016.1 mouse_genomes_project 11 110649889 110672782 - Zfp385c protein_coding processed_transcript MGP_NODShiLtJ_T0032163.1 MGP_NODShiLtJ_G0019016.1 mouse_genomes_project 11 110650652 110681698 - MGP_NODShiLtJ_P0032163 Zfp385c protein_coding protein_coding MGP_NODShiLtJ_T0032164.1 MGP_NODShiLtJ_G0019016.1 mouse_genomes_project 11 110658467 110710291 - MGP_NODShiLtJ_P0032164 Zfp385c protein_coding protein_coding MGP_NODShiLtJ_T0003283.1 MGP_NODShiLtJ_G0003025.1 mouse_genomes_project 11 120735155 120738168 + Gm11684 antisense antisense MGP_NODShiLtJ_T0033809.1 MGP_NODShiLtJ_G0019354.1 mouse_genomes_project 11 132478095 132487765 - protein_coding retained_intron MGP_NODShiLtJ_T0033810.1 MGP_NODShiLtJ_G0019354.1 mouse_genomes_project 11 132478602 132487794 - MGP_NODShiLtJ_P0033810 protein_coding protein_coding MGP_NODShiLtJ_T0033811.1 MGP_NODShiLtJ_G0019354.1 mouse_genomes_project 11 132478921 132479929 - protein_coding retained_intron MGP_NODShiLtJ_T0033812.1 MGP_NODShiLtJ_G0019354.1 mouse_genomes_project 11 132482011 132483208 - protein_coding processed_transcript MGP_NODShiLtJ_T0033813.1 MGP_NODShiLtJ_G0019354.1 mouse_genomes_project 11 132482066 132487766 - protein_coding retained_intron MGP_NODShiLtJ_T0033814.1 MGP_NODShiLtJ_G0019354.1 mouse_genomes_project 11 132485210 132487739 - protein_coding processed_transcript MGP_NODShiLtJ_T0033815.1 MGP_NODShiLtJ_G0019354.1 mouse_genomes_project 11 132486026 132487515 - protein_coding processed_transcript MGP_NODShiLtJ_T0006203.1 MGP_NODShiLtJ_G0005179.1 mouse_genomes_project 11 77638901 77640474 - 6330403K07Rik lincRNA lincRNA MGP_NODShiLtJ_T0030473.1 MGP_NODShiLtJ_G0018561.1 mouse_genomes_project 11 82612441 82620378 + protein_coding processed_transcript MGP_NODShiLtJ_T0030474.1 MGP_NODShiLtJ_G0018561.1 mouse_genomes_project 11 82618793 82621055 + MGP_NODShiLtJ_P0030474 protein_coding protein_coding MGP_NODShiLtJ_T0030475.1 MGP_NODShiLtJ_G0018561.1 mouse_genomes_project 11 82618793 82621297 + MGP_NODShiLtJ_P0030475 protein_coding protein_coding MGP_NODShiLtJ_T0030476.1 MGP_NODShiLtJ_G0018561.1 mouse_genomes_project 11 82619425 82620791 + protein_coding retained_intron MGP_NODShiLtJ_T0030207.1 MGP_NODShiLtJ_G0018476.1 mouse_genomes_project 11 78745247 78746498 + MGP_NODShiLtJ_P0030207 Fam64a protein_coding protein_coding MGP_NODShiLtJ_T0030208.1 MGP_NODShiLtJ_G0018476.1 mouse_genomes_project 11 78745670 78750586 + MGP_NODShiLtJ_P0030208 Fam64a protein_coding protein_coding MGP_NODShiLtJ_T0030209.1 MGP_NODShiLtJ_G0018476.1 mouse_genomes_project 11 78745717 78746880 + Fam64a protein_coding processed_transcript MGP_NODShiLtJ_T0030210.1 MGP_NODShiLtJ_G0018476.1 mouse_genomes_project 11 78745739 78749309 + Fam64a protein_coding processed_transcript MGP_NODShiLtJ_T0030211.1 MGP_NODShiLtJ_G0018476.1 mouse_genomes_project 11 78746137 78748256 + MGP_NODShiLtJ_P0030211 Fam64a protein_coding protein_coding MGP_NODShiLtJ_T0031514.1 MGP_NODShiLtJ_G0018811.1 mouse_genomes_project 11 103828238 103879301 - MGP_NODShiLtJ_P0031514 Acsf2 protein_coding protein_coding MGP_NODShiLtJ_T0031515.1 MGP_NODShiLtJ_G0018811.1 mouse_genomes_project 11 103830702 103836954 - Acsf2 protein_coding processed_transcript MGP_NODShiLtJ_T0031517.1 MGP_NODShiLtJ_G0018811.1 mouse_genomes_project 11 103842362 103847798 - Acsf2 protein_coding processed_transcript MGP_NODShiLtJ_T0031518.1 MGP_NODShiLtJ_G0018811.1 mouse_genomes_project 11 103843338 103879199 - Acsf2 protein_coding processed_transcript MGP_NODShiLtJ_T0012581.1 MGP_NODShiLtJ_G0010689.1 mouse_genomes_project 11 94056964 94057443 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012377.1 MGP_NODShiLtJ_G0010485.1 mouse_genomes_project 11 16578413 16579256 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012403.1 MGP_NODShiLtJ_G0010511.1 mouse_genomes_project 11 21696164 21697109 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012443.1 MGP_NODShiLtJ_G0010551.1 mouse_genomes_project 11 37654070 37654754 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012612.1 MGP_NODShiLtJ_G0010720.1 mouse_genomes_project 11 107766031 107766187 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0030199.1 MGP_NODShiLtJ_G0018474.1 mouse_genomes_project 11 78448279 78458466 + MGP_NODShiLtJ_P0030199 Wscd1 protein_coding protein_coding MGP_NODShiLtJ_T0030200.1 MGP_NODShiLtJ_G0018474.1 mouse_genomes_project 11 78449044 78488027 + MGP_NODShiLtJ_P0030200 Wscd1 protein_coding protein_coding MGP_NODShiLtJ_T0030201.1 MGP_NODShiLtJ_G0018474.1 mouse_genomes_project 11 78449339 78488027 + MGP_NODShiLtJ_P0030201 Wscd1 protein_coding protein_coding MGP_NODShiLtJ_T0030202.1 MGP_NODShiLtJ_G0018474.1 mouse_genomes_project 11 78449735 78459322 + Wscd1 protein_coding retained_intron MGP_NODShiLtJ_T0030203.1 MGP_NODShiLtJ_G0018474.1 mouse_genomes_project 11 78449735 78488027 + MGP_NODShiLtJ_P0030203 Wscd1 protein_coding protein_coding MGP_NODShiLtJ_T0030204.1 MGP_NODShiLtJ_G0018474.1 mouse_genomes_project 11 78467029 78483665 + Wscd1 protein_coding processed_transcript MGP_NODShiLtJ_T0027563.1 MGP_NODShiLtJ_G0017835.1 mouse_genomes_project 11 1113279 1141966 + Tbc1d10a protein_coding processed_transcript MGP_NODShiLtJ_T0027564.1 MGP_NODShiLtJ_G0017835.1 mouse_genomes_project 11 1113279 1142586 + MGP_NODShiLtJ_P0027564 Tbc1d10a protein_coding protein_coding MGP_NODShiLtJ_T0027565.1 MGP_NODShiLtJ_G0017835.1 mouse_genomes_project 11 1113312 1142583 + MGP_NODShiLtJ_P0027565 Tbc1d10a protein_coding protein_coding MGP_NODShiLtJ_T0027566.1 MGP_NODShiLtJ_G0017835.1 mouse_genomes_project 11 1132492 1137070 + Tbc1d10a protein_coding processed_transcript MGP_NODShiLtJ_T0027567.1 MGP_NODShiLtJ_G0017835.1 mouse_genomes_project 11 1139390 1140680 + Tbc1d10a protein_coding processed_transcript MGP_NODShiLtJ_T0027568.1 MGP_NODShiLtJ_G0017835.1 mouse_genomes_project 11 1139554 1140936 + Tbc1d10a protein_coding processed_transcript MGP_NODShiLtJ_T0011208.1 MGP_NODShiLtJ_G0009341.1 mouse_genomes_project 11 128991112 128991440 + Gm22667 misc_RNA misc_RNA MGP_NODShiLtJ_T0027804.1 MGP_NODShiLtJ_G0017888.1 mouse_genomes_project 11 4103614 4105682 - Gm11983 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0027805.1 MGP_NODShiLtJ_G0017888.1 mouse_genomes_project 11 4104835 4105153 - MGP_NODShiLtJ_P0027805 Gm11983 protein_coding protein_coding MGP_NODShiLtJ_T0012672.1 MGP_NODShiLtJ_G0010780.1 mouse_genomes_project 11 133617068 133617403 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0027513.1 MGP_NODShiLtJ_G0017823.1 mouse_genomes_project 11 801837 809481 - MGP_NODShiLtJ_P0027513 Slc35e4 protein_coding protein_coding MGP_NODShiLtJ_T0027514.1 MGP_NODShiLtJ_G0017823.1 mouse_genomes_project 11 801838 809481 - MGP_NODShiLtJ_P0027514 Slc35e4 protein_coding protein_coding MGP_NODShiLtJ_T0012578.1 MGP_NODShiLtJ_G0010686.1 mouse_genomes_project 11 93131309 93131718 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0032520.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112646633 112651193 - MGP_NODShiLtJ_P0032520 Slc25a39 protein_coding protein_coding MGP_NODShiLtJ_T0032521.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112646633 112651138 - MGP_NODShiLtJ_P0032521 Slc25a39 protein_coding protein_coding MGP_NODShiLtJ_T0032522.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112646690 112648142 - MGP_NODShiLtJ_P0032522 Slc25a39 protein_coding protein_coding MGP_NODShiLtJ_T0032523.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112646793 112651155 - Slc25a39 protein_coding retained_intron MGP_NODShiLtJ_T0032524.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112647439 112651157 - MGP_NODShiLtJ_P0032524 Slc25a39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032525.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112647666 112651105 - Slc25a39 protein_coding retained_intron MGP_NODShiLtJ_T0032526.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112647680 112650465 - MGP_NODShiLtJ_P0032526 Slc25a39 protein_coding protein_coding MGP_NODShiLtJ_T0032527.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112647710 112651136 - MGP_NODShiLtJ_P0032527 Slc25a39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0032528.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112648037 112651112 - Slc25a39 protein_coding retained_intron MGP_NODShiLtJ_T0032529.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112648132 112650964 - MGP_NODShiLtJ_P0032529 Slc25a39 protein_coding protein_coding MGP_NODShiLtJ_T0032530.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112648257 112650604 - MGP_NODShiLtJ_P0032530 Slc25a39 protein_coding protein_coding MGP_NODShiLtJ_T0032531.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112648435 112651032 - MGP_NODShiLtJ_P0032531 Slc25a39 protein_coding protein_coding MGP_NODShiLtJ_T0032532.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112648502 112651595 - MGP_NODShiLtJ_P0032532 Slc25a39 protein_coding protein_coding MGP_NODShiLtJ_T0032533.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112648671 112650457 - Slc25a39 protein_coding processed_transcript MGP_NODShiLtJ_T0032534.1 MGP_NODShiLtJ_G0019087.1 mouse_genomes_project 11 112649387 112650533 - Slc25a39 protein_coding retained_intron MGP_NODShiLtJ_T0003236.1 MGP_NODShiLtJ_G0002986.1 mouse_genomes_project 11 109236446 109236999 + Gm11940 antisense antisense MGP_NODShiLtJ_T0028591.1 MGP_NODShiLtJ_G0018093.1 mouse_genomes_project 11 54640395 54684746 + MGP_NODShiLtJ_P0028591 Tbc1d9b protein_coding protein_coding MGP_NODShiLtJ_T0028592.1 MGP_NODShiLtJ_G0018093.1 mouse_genomes_project 11 54640395 54685501 + MGP_NODShiLtJ_P0028592 Tbc1d9b protein_coding protein_coding MGP_NODShiLtJ_T0028593.1 MGP_NODShiLtJ_G0018093.1 mouse_genomes_project 11 54640401 54649453 + Tbc1d9b protein_coding processed_transcript MGP_NODShiLtJ_T0028594.1 MGP_NODShiLtJ_G0018093.1 mouse_genomes_project 11 54644421 54649563 + Tbc1d9b protein_coding processed_transcript MGP_NODShiLtJ_T0028595.1 MGP_NODShiLtJ_G0018093.1 mouse_genomes_project 11 54654177 54659201 + Tbc1d9b protein_coding processed_transcript MGP_NODShiLtJ_T0028596.1 MGP_NODShiLtJ_G0018093.1 mouse_genomes_project 11 54655566 54660436 + Tbc1d9b protein_coding processed_transcript MGP_NODShiLtJ_T0028597.1 MGP_NODShiLtJ_G0018093.1 mouse_genomes_project 11 54657126 54658960 + Tbc1d9b protein_coding processed_transcript MGP_NODShiLtJ_T0028598.1 MGP_NODShiLtJ_G0018093.1 mouse_genomes_project 11 54670646 54673079 + Tbc1d9b protein_coding processed_transcript MGP_NODShiLtJ_T0028762.1 MGP_NODShiLtJ_G0018133.1 mouse_genomes_project 11 56867235 56869225 - MGP_NODShiLtJ_P0028762 Olfr1383 protein_coding protein_coding MGP_NODShiLtJ_T0028763.1 MGP_NODShiLtJ_G0018133.1 mouse_genomes_project 11 56867235 56869000 - MGP_NODShiLtJ_P0028763 Olfr1383 protein_coding protein_coding MGP_NODShiLtJ_T0032922.1 MGP_NODShiLtJ_G0019173.1 mouse_genomes_project 11 118241963 118260487 + MGP_NODShiLtJ_P0032922 Psmd12 protein_coding protein_coding MGP_NODShiLtJ_T0032923.1 MGP_NODShiLtJ_G0019173.1 mouse_genomes_project 11 118242007 118266601 + MGP_NODShiLtJ_P0032923 Psmd12 protein_coding protein_coding MGP_NODShiLtJ_T0032924.1 MGP_NODShiLtJ_G0019173.1 mouse_genomes_project 11 118242056 118260047 + MGP_NODShiLtJ_P0032924 Psmd12 protein_coding protein_coding MGP_NODShiLtJ_T0006185.1 MGP_NODShiLtJ_G0005165.1 mouse_genomes_project 11 67590579 67593297 - A530017D24Rik lincRNA lincRNA MGP_NODShiLtJ_T0006186.1 MGP_NODShiLtJ_G0005165.1 mouse_genomes_project 11 67591228 67594078 - A530017D24Rik lincRNA lincRNA MGP_NODShiLtJ_T0029193.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65784879 65916858 - MGP_NODShiLtJ_P0029193 Tom1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029194.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65784880 65797342 - Tom1l2 protein_coding processed_transcript MGP_NODShiLtJ_T0029195.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65784880 65916858 - MGP_NODShiLtJ_P0029195 Tom1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029196.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65784880 65916858 - MGP_NODShiLtJ_P0029196 Tom1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029197.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65784880 65916858 - MGP_NODShiLtJ_P0029197 Tom1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029198.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65787768 65789513 - Tom1l2 protein_coding processed_transcript MGP_NODShiLtJ_T0029199.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65788067 65803327 - MGP_NODShiLtJ_P0029199 Tom1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029200.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65788067 65803839 - MGP_NODShiLtJ_P0029200 Tom1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029201.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65798751 65916858 - MGP_NODShiLtJ_P0029201 Tom1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029202.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65799118 65916858 - MGP_NODShiLtJ_P0029202 Tom1l2 protein_coding protein_coding MGP_NODShiLtJ_T0029203.1 MGP_NODShiLtJ_G0018265.1 mouse_genomes_project 11 65811042 65916858 - Tom1l2 protein_coding processed_transcript MGP_NODShiLtJ_T0101265.1 MGP_NODShiLtJ_G0039547.1 mouse_genomes_project 11 2886259 2907278 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101266.1 MGP_NODShiLtJ_G0039547.1 mouse_genomes_project 11 2886280 2907642 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101267.1 MGP_NODShiLtJ_G0039547.1 mouse_genomes_project 11 2886280 2910117 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101268.1 MGP_NODShiLtJ_G0039547.1 mouse_genomes_project 11 2886347 2909344 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101269.1 MGP_NODShiLtJ_G0039547.1 mouse_genomes_project 11 2889463 2909835 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0033674.1 MGP_NODShiLtJ_G0019328.1 mouse_genomes_project 11 130999378 131004116 + MGP_NODShiLtJ_P0033674 Enpp7 protein_coding protein_coding MGP_NODShiLtJ_T0033675.1 MGP_NODShiLtJ_G0019328.1 mouse_genomes_project 11 130999406 131003940 + MGP_NODShiLtJ_P0033675 Enpp7 protein_coding protein_coding MGP_NODShiLtJ_T0027904.1 MGP_NODShiLtJ_G0017911.1 mouse_genomes_project 11 16235110 16273592 - MGP_NODShiLtJ_P0027904 Plek protein_coding protein_coding MGP_NODShiLtJ_T0027905.1 MGP_NODShiLtJ_G0017911.1 mouse_genomes_project 11 16255720 16267010 - MGP_NODShiLtJ_P0027905 Plek protein_coding protein_coding MGP_NODShiLtJ_T0011199.1 MGP_NODShiLtJ_G0009332.1 mouse_genomes_project 11 97581276 97581538 - Gm24734 misc_RNA misc_RNA MGP_NODShiLtJ_T0033958.1 MGP_NODShiLtJ_G0019382.1 mouse_genomes_project 11 132869403 132873833 - MGP_NODShiLtJ_P0033958 Dcxr protein_coding protein_coding MGP_NODShiLtJ_T0033959.1 MGP_NODShiLtJ_G0019382.1 mouse_genomes_project 11 132869403 132873795 - MGP_NODShiLtJ_P0033959 Dcxr protein_coding protein_coding MGP_NODShiLtJ_T0033960.1 MGP_NODShiLtJ_G0019382.1 mouse_genomes_project 11 132869429 132873796 - Dcxr protein_coding retained_intron MGP_NODShiLtJ_T0033961.1 MGP_NODShiLtJ_G0019382.1 mouse_genomes_project 11 132869459 132873781 - Dcxr protein_coding processed_transcript MGP_NODShiLtJ_T0033962.1 MGP_NODShiLtJ_G0019382.1 mouse_genomes_project 11 132869508 132872297 - MGP_NODShiLtJ_P0033962 Dcxr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0031076.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91867274 91946921 + MGP_NODShiLtJ_P0031076 Synrg protein_coding protein_coding MGP_NODShiLtJ_T0031077.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91867274 91952025 + MGP_NODShiLtJ_P0031077 Synrg protein_coding protein_coding MGP_NODShiLtJ_T0031078.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91867322 91946895 + MGP_NODShiLtJ_P0031078 Synrg protein_coding protein_coding MGP_NODShiLtJ_T0031079.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91867322 91946895 + MGP_NODShiLtJ_P0031079 Synrg protein_coding protein_coding MGP_NODShiLtJ_T0031080.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91884795 91894050 + Synrg protein_coding processed_transcript MGP_NODShiLtJ_T0031081.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91885639 91895110 + MGP_NODShiLtJ_P0031081 Synrg protein_coding protein_coding MGP_NODShiLtJ_T0031082.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91894049 91895526 + Synrg protein_coding retained_intron MGP_NODShiLtJ_T0031083.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91924688 91947378 + Synrg protein_coding retained_intron MGP_NODShiLtJ_T0031084.1 MGP_NODShiLtJ_G0018713.1 mouse_genomes_project 11 91932136 91945977 + Synrg protein_coding retained_intron MGP_NODShiLtJ_T0012670.1 MGP_NODShiLtJ_G0010778.1 mouse_genomes_project 11 133274740 133274908 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0028315.1 MGP_NODShiLtJ_G0018013.1 mouse_genomes_project 11 37672026 37699718 - MGP_NODShiLtJ_P0028315 Rars protein_coding protein_coding MGP_NODShiLtJ_T0028316.1 MGP_NODShiLtJ_G0018013.1 mouse_genomes_project 11 37680797 37685237 - Rars protein_coding processed_transcript MGP_NODShiLtJ_T0028317.1 MGP_NODShiLtJ_G0018013.1 mouse_genomes_project 11 37682557 37686631 - Rars protein_coding retained_intron MGP_NODShiLtJ_T0028318.1 MGP_NODShiLtJ_G0018013.1 mouse_genomes_project 11 37686264 37690285 - Rars protein_coding retained_intron MGP_NODShiLtJ_T0028319.1 MGP_NODShiLtJ_G0018013.1 mouse_genomes_project 11 37691647 37699673 - Rars protein_coding processed_transcript MGP_NODShiLtJ_T0031247.1 MGP_NODShiLtJ_G0018750.1 mouse_genomes_project 11 95308975 95409001 + MGP_NODShiLtJ_P0031247 Trim37 protein_coding protein_coding MGP_NODShiLtJ_T0031248.1 MGP_NODShiLtJ_G0018750.1 mouse_genomes_project 11 95309203 95333498 + MGP_NODShiLtJ_P0031248 Trim37 protein_coding protein_coding MGP_NODShiLtJ_T0031249.1 MGP_NODShiLtJ_G0018750.1 mouse_genomes_project 11 95374216 95395933 + Trim37 protein_coding retained_intron MGP_NODShiLtJ_T0031250.1 MGP_NODShiLtJ_G0018750.1 mouse_genomes_project 11 95377773 95406576 + MGP_NODShiLtJ_P0031250 Trim37 protein_coding protein_coding MGP_NODShiLtJ_T0011183.1 MGP_NODShiLtJ_G0009316.1 mouse_genomes_project 11 531175 531263 - Gm27937 misc_RNA misc_RNA MGP_NODShiLtJ_T0099915.1 MGP_NODShiLtJ_G0038309.1 mouse_genomes_project 11 27999331 27999463 - Gm25387 snoRNA snoRNA MGP_NODShiLtJ_T0033847.1 MGP_NODShiLtJ_G0019361.1 mouse_genomes_project 11 132593470 132601155 + Hgs protein_coding processed_transcript MGP_NODShiLtJ_T0033848.1 MGP_NODShiLtJ_G0019361.1 mouse_genomes_project 11 132593470 132603168 + MGP_NODShiLtJ_P0033848 Hgs protein_coding protein_coding MGP_NODShiLtJ_T0033849.1 MGP_NODShiLtJ_G0019361.1 mouse_genomes_project 11 132593470 132612445 + MGP_NODShiLtJ_P0033849 Hgs protein_coding protein_coding MGP_NODShiLtJ_T0033850.1 MGP_NODShiLtJ_G0019361.1 mouse_genomes_project 11 132593470 132612440 + MGP_NODShiLtJ_P0033850 Hgs protein_coding protein_coding MGP_NODShiLtJ_T0033851.1 MGP_NODShiLtJ_G0019361.1 mouse_genomes_project 11 132593470 132612440 + MGP_NODShiLtJ_P0033851 Hgs protein_coding protein_coding MGP_NODShiLtJ_T0033852.1 MGP_NODShiLtJ_G0019361.1 mouse_genomes_project 11 132603350 132606023 + MGP_NODShiLtJ_P0033852 Hgs protein_coding protein_coding MGP_NODShiLtJ_T0033559.1 MGP_NODShiLtJ_G0019303.1 mouse_genomes_project 11 129064272 129243615 + MGP_NODShiLtJ_P0033559 Sept9 protein_coding protein_coding MGP_NODShiLtJ_T0033560.1 MGP_NODShiLtJ_G0019303.1 mouse_genomes_project 11 129106794 129243603 + MGP_NODShiLtJ_P0033560 Sept9 protein_coding protein_coding MGP_NODShiLtJ_T0033561.1 MGP_NODShiLtJ_G0019303.1 mouse_genomes_project 11 129142302 129243610 + MGP_NODShiLtJ_P0033561 Sept9 protein_coding protein_coding MGP_NODShiLtJ_T0033562.1 MGP_NODShiLtJ_G0019303.1 mouse_genomes_project 11 129189170 129233499 + MGP_NODShiLtJ_P0033562 Sept9 protein_coding protein_coding MGP_NODShiLtJ_T0033563.1 MGP_NODShiLtJ_G0019303.1 mouse_genomes_project 11 129207444 129237663 + MGP_NODShiLtJ_P0033563 Sept9 protein_coding protein_coding MGP_NODShiLtJ_T0033564.1 MGP_NODShiLtJ_G0019303.1 mouse_genomes_project 11 129213439 129242916 + Sept9 protein_coding retained_intron MGP_NODShiLtJ_T0033565.1 MGP_NODShiLtJ_G0019303.1 mouse_genomes_project 11 129234466 129238286 + Sept9 protein_coding retained_intron MGP_NODShiLtJ_T0033566.1 MGP_NODShiLtJ_G0019303.1 mouse_genomes_project 11 129240646 129242153 + Sept9 protein_coding retained_intron MGP_NODShiLtJ_T0030172.1 MGP_NODShiLtJ_G0018468.1 mouse_genomes_project 11 77583201 77588406 - MGP_NODShiLtJ_P0030172 C1qbp protein_coding protein_coding MGP_NODShiLtJ_T0030173.1 MGP_NODShiLtJ_G0018468.1 mouse_genomes_project 11 77583213 77584240 - C1qbp protein_coding retained_intron MGP_NODShiLtJ_T0030174.1 MGP_NODShiLtJ_G0018468.1 mouse_genomes_project 11 77586400 77588387 - C1qbp protein_coding retained_intron MGP_NODShiLtJ_T0031055.1 MGP_NODShiLtJ_G0018703.1 mouse_genomes_project 11 91468589 91473803 - MGP_NODShiLtJ_P0031055 Ccl6 protein_coding protein_coding MGP_NODShiLtJ_T0031056.1 MGP_NODShiLtJ_G0018703.1 mouse_genomes_project 11 91469102 91470583 - Ccl6 protein_coding retained_intron MGP_NODShiLtJ_T0031057.1 MGP_NODShiLtJ_G0018703.1 mouse_genomes_project 11 91470180 91473691 - Ccl6 protein_coding retained_intron MGP_NODShiLtJ_T0031403.1 MGP_NODShiLtJ_G0018790.1 mouse_genomes_project 11 99214238 99220505 + MGP_NODShiLtJ_P0031403 Cox11 protein_coding protein_coding MGP_NODShiLtJ_T0031404.1 MGP_NODShiLtJ_G0018790.1 mouse_genomes_project 11 99214250 99220884 + MGP_NODShiLtJ_P0031404 Cox11 protein_coding protein_coding MGP_NODShiLtJ_T0036367.1 MGP_NODShiLtJ_G0020244.1 mouse_genomes_project 13 27486389 27492170 - MGP_NODShiLtJ_P0036367 Prl8a9 protein_coding protein_coding MGP_NODShiLtJ_T0012813.1 MGP_NODShiLtJ_G0010921.1 mouse_genomes_project 13 71644724 71645549 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012767.1 MGP_NODShiLtJ_G0010875.1 mouse_genomes_project 13 21570032 21573592 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000865.1 MGP_NODShiLtJ_G0000794.1 mouse_genomes_project 13 75084243 75087487 - TEC TEC MGP_NODShiLtJ_T0036001.1 MGP_NODShiLtJ_G0020070.1 mouse_genomes_project 13 6404515 6428843 - MGP_NODShiLtJ_P0036001 Gtpbp4 protein_coding protein_coding MGP_NODShiLtJ_T0036002.1 MGP_NODShiLtJ_G0020070.1 mouse_genomes_project 13 6405545 6428864 - MGP_NODShiLtJ_P0036002 Gtpbp4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000879.1 MGP_NODShiLtJ_G0000808.1 mouse_genomes_project 13 111304264 111304664 - TEC TEC MGP_NODShiLtJ_T0003381.1 MGP_NODShiLtJ_G0003100.1 mouse_genomes_project 13 21072364 21073266 + Gm11290 antisense antisense MGP_NODShiLtJ_T0003382.1 MGP_NODShiLtJ_G0003100.1 mouse_genomes_project 13 21072364 21073244 + Gm11290 antisense antisense MGP_NODShiLtJ_T0037262.1 MGP_NODShiLtJ_G0020575.1 mouse_genomes_project 13 73732466 73738647 + MGP_NODShiLtJ_P0037262 Med10 protein_coding protein_coding MGP_NODShiLtJ_T0037910.1 MGP_NODShiLtJ_G0020778.1 mouse_genomes_project 13 123799157 123847007 + MGP_NODShiLtJ_P0037910 Dhx29 protein_coding protein_coding MGP_NODShiLtJ_T0037572.1 MGP_NODShiLtJ_G0020673.1 mouse_genomes_project 13 103746432 103786869 + MGP_NODShiLtJ_P0037572 Wdr41 protein_coding protein_coding MGP_NODShiLtJ_T0037573.1 MGP_NODShiLtJ_G0020673.1 mouse_genomes_project 13 103746436 103795652 + MGP_NODShiLtJ_P0037573 Wdr41 protein_coding protein_coding MGP_NODShiLtJ_T0037574.1 MGP_NODShiLtJ_G0020673.1 mouse_genomes_project 13 103746436 103795651 + MGP_NODShiLtJ_P0037574 Wdr41 protein_coding protein_coding MGP_NODShiLtJ_T0037575.1 MGP_NODShiLtJ_G0020673.1 mouse_genomes_project 13 103746526 103786815 + MGP_NODShiLtJ_P0037575 Wdr41 protein_coding protein_coding MGP_NODShiLtJ_T0037576.1 MGP_NODShiLtJ_G0020673.1 mouse_genomes_project 13 103746526 103786815 + MGP_NODShiLtJ_P0037576 Wdr41 protein_coding protein_coding MGP_NODShiLtJ_T0037577.1 MGP_NODShiLtJ_G0020673.1 mouse_genomes_project 13 103746526 103786815 + MGP_NODShiLtJ_P0037577 Wdr41 protein_coding protein_coding MGP_NODShiLtJ_T0037974.1 MGP_NODShiLtJ_G0020808.1 mouse_genomes_project 13 131565027 131693120 - MGP_NODShiLtJ_P0037974 3110070M22Rik protein_coding protein_coding MGP_NODShiLtJ_T0009830.1 MGP_NODShiLtJ_G0007963.1 mouse_genomes_project 13 20976908 20976997 - Gm44456 miRNA miRNA MGP_NODShiLtJ_T0036701.1 MGP_NODShiLtJ_G0020381.1 mouse_genomes_project 13 51882025 51909842 + MGP_NODShiLtJ_P0036701 Nol8 protein_coding protein_coding MGP_NODShiLtJ_T0036430.1 MGP_NODShiLtJ_G0020277.1 mouse_genomes_project 13 33773607 33795632 + MGP_NODShiLtJ_P0036430 protein_coding protein_coding MGP_NODShiLtJ_T0036125.1 MGP_NODShiLtJ_G0020110.1 mouse_genomes_project 13 18506053 18581656 - MGP_NODShiLtJ_P0036125 Nme8 protein_coding protein_coding MGP_NODShiLtJ_T0036126.1 MGP_NODShiLtJ_G0020110.1 mouse_genomes_project 13 18506053 18581690 - MGP_NODShiLtJ_P0036126 Nme8 protein_coding protein_coding MGP_NODShiLtJ_T0100052.1 MGP_NODShiLtJ_G0038446.1 mouse_genomes_project 13 31667348 31667463 + Gm22330 snoRNA snoRNA MGP_NODShiLtJ_T0012843.1 MGP_NODShiLtJ_G0010951.1 mouse_genomes_project 13 122665071 122667759 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037578.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103796791 104053358 - MGP_NODShiLtJ_P0037578 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037579.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103796796 103806590 - MGP_NODShiLtJ_P0037579 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037580.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103796842 104024583 - MGP_NODShiLtJ_P0037580 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037581.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103797667 103818399 - Pde8b protein_coding processed_transcript MGP_NODShiLtJ_T0037582.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103798440 104053188 - MGP_NODShiLtJ_P0037582 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037583.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103798457 104024330 - MGP_NODShiLtJ_P0037583 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037584.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103798457 104024330 - MGP_NODShiLtJ_P0037584 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037585.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103798457 104024330 - MGP_NODShiLtJ_P0037585 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037586.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103806282 104025072 - MGP_NODShiLtJ_P0037586 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037587.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103815354 104053296 - MGP_NODShiLtJ_P0037587 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037588.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103815800 103825255 - Pde8b protein_coding retained_intron MGP_NODShiLtJ_T0037589.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103867246 104024583 - Pde8b protein_coding retained_intron MGP_NODShiLtJ_T0037590.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103878096 104053337 - MGP_NODShiLtJ_P0037590 Pde8b protein_coding protein_coding MGP_NODShiLtJ_T0037591.1 MGP_NODShiLtJ_G0020674.1 mouse_genomes_project 13 103882458 103987180 - Pde8b protein_coding processed_transcript MGP_NODShiLtJ_T0037443.1 MGP_NODShiLtJ_G0020633.1 mouse_genomes_project 13 91572850 91687970 - MGP_NODShiLtJ_P0037443 protein_coding protein_coding MGP_NODShiLtJ_T0037444.1 MGP_NODShiLtJ_G0020633.1 mouse_genomes_project 13 91574121 91582695 - protein_coding retained_intron MGP_NODShiLtJ_T0037445.1 MGP_NODShiLtJ_G0020633.1 mouse_genomes_project 13 91574173 91582773 - MGP_NODShiLtJ_P0037445 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037446.1 MGP_NODShiLtJ_G0020633.1 mouse_genomes_project 13 91582363 91587700 - protein_coding retained_intron MGP_NODShiLtJ_T0037447.1 MGP_NODShiLtJ_G0020633.1 mouse_genomes_project 13 91585213 91587011 - protein_coding retained_intron MGP_NODShiLtJ_T0037448.1 MGP_NODShiLtJ_G0020633.1 mouse_genomes_project 13 91595947 91596365 - protein_coding retained_intron MGP_NODShiLtJ_T0037684.1 MGP_NODShiLtJ_G0020714.1 mouse_genomes_project 13 109158874 109162511 - MGP_NODShiLtJ_P0037684 Cartpt protein_coding protein_coding MGP_NODShiLtJ_T0012788.1 MGP_NODShiLtJ_G0010896.1 mouse_genomes_project 13 28634452 28634941 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037778.1 MGP_NODShiLtJ_G0020737.1 mouse_genomes_project 13 113499065 113616699 - MGP_NODShiLtJ_P0037778 protein_coding protein_coding MGP_NODShiLtJ_T0037779.1 MGP_NODShiLtJ_G0020737.1 mouse_genomes_project 13 113499069 113616480 - MGP_NODShiLtJ_P0037779 protein_coding protein_coding MGP_NODShiLtJ_T0037780.1 MGP_NODShiLtJ_G0020737.1 mouse_genomes_project 13 113499069 113583321 - MGP_NODShiLtJ_P0037780 protein_coding protein_coding MGP_NODShiLtJ_T0037781.1 MGP_NODShiLtJ_G0020737.1 mouse_genomes_project 13 113499885 113616480 - MGP_NODShiLtJ_P0037781 protein_coding protein_coding MGP_NODShiLtJ_T0037782.1 MGP_NODShiLtJ_G0020737.1 mouse_genomes_project 13 113499885 113616480 - MGP_NODShiLtJ_P0037782 protein_coding protein_coding MGP_NODShiLtJ_T0037783.1 MGP_NODShiLtJ_G0020737.1 mouse_genomes_project 13 113499885 113616480 - MGP_NODShiLtJ_P0037783 protein_coding protein_coding MGP_NODShiLtJ_T0037784.1 MGP_NODShiLtJ_G0020737.1 mouse_genomes_project 13 113527849 113616699 - protein_coding retained_intron MGP_NODShiLtJ_T0036158.1 MGP_NODShiLtJ_G0020125.1 mouse_genomes_project 13 20406859 20428420 - MGP_NODShiLtJ_P0036158 protein_coding protein_coding MGP_NODShiLtJ_T0036159.1 MGP_NODShiLtJ_G0020125.1 mouse_genomes_project 13 20406862 20428229 - MGP_NODShiLtJ_P0036159 protein_coding protein_coding MGP_NODShiLtJ_T0036160.1 MGP_NODShiLtJ_G0020125.1 mouse_genomes_project 13 20407434 20428563 - MGP_NODShiLtJ_P0036160 protein_coding protein_coding MGP_NODShiLtJ_T0036161.1 MGP_NODShiLtJ_G0020125.1 mouse_genomes_project 13 20407434 20428577 - MGP_NODShiLtJ_P0036161 protein_coding protein_coding MGP_NODShiLtJ_T0036162.1 MGP_NODShiLtJ_G0020125.1 mouse_genomes_project 13 20408776 20428229 - MGP_NODShiLtJ_P0036162 protein_coding protein_coding MGP_NODShiLtJ_T0036702.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51912924 51969572 + MGP_NODShiLtJ_P0036702 Iars protein_coding protein_coding MGP_NODShiLtJ_T0036703.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51912954 51969572 + MGP_NODShiLtJ_P0036703 Iars protein_coding protein_coding MGP_NODShiLtJ_T0036704.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51913015 51920111 + MGP_NODShiLtJ_P0036704 Iars protein_coding protein_coding MGP_NODShiLtJ_T0036705.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51919190 51969046 + MGP_NODShiLtJ_P0036705 Iars protein_coding protein_coding MGP_NODShiLtJ_T0036706.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51932162 51938051 + MGP_NODShiLtJ_P0036706 Iars protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036707.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51932913 51944953 + Iars protein_coding retained_intron MGP_NODShiLtJ_T0036708.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51934572 51944327 + Iars protein_coding retained_intron MGP_NODShiLtJ_T0036709.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51947026 51952339 + Iars protein_coding retained_intron MGP_NODShiLtJ_T0036710.1 MGP_NODShiLtJ_G0020382.1 mouse_genomes_project 13 51951289 51952267 + Iars protein_coding retained_intron MGP_NODShiLtJ_T0011233.1 MGP_NODShiLtJ_G0009366.1 mouse_genomes_project 13 6573557 6573851 + Gm23553 misc_RNA misc_RNA MGP_NODShiLtJ_T0036625.1 MGP_NODShiLtJ_G0020355.1 mouse_genomes_project 13 48611819 48662390 - MGP_NODShiLtJ_P0036625 Nup153 protein_coding protein_coding MGP_NODShiLtJ_T0036626.1 MGP_NODShiLtJ_G0020355.1 mouse_genomes_project 13 48612989 48613867 - Nup153 protein_coding retained_intron MGP_NODShiLtJ_T0036627.1 MGP_NODShiLtJ_G0020355.1 mouse_genomes_project 13 48614759 48615929 - Nup153 protein_coding retained_intron MGP_NODShiLtJ_T0036628.1 MGP_NODShiLtJ_G0020355.1 mouse_genomes_project 13 48631543 48634024 - Nup153 protein_coding retained_intron MGP_NODShiLtJ_T0036629.1 MGP_NODShiLtJ_G0020355.1 mouse_genomes_project 13 48644331 48651679 - Nup153 protein_coding processed_transcript MGP_NODShiLtJ_T0012751.1 MGP_NODShiLtJ_G0010859.1 mouse_genomes_project 13 6347454 6364941 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100067.1 MGP_NODShiLtJ_G0038461.1 mouse_genomes_project 13 74130216 74130344 + Gm26018 snoRNA snoRNA MGP_NODShiLtJ_T0037234.1 MGP_NODShiLtJ_G0020560.1 mouse_genomes_project 13 71701800 71711687 - MGP_NODShiLtJ_P0037234 protein_coding protein_coding MGP_NODShiLtJ_T0037235.1 MGP_NODShiLtJ_G0020560.1 mouse_genomes_project 13 71701800 71711597 - MGP_NODShiLtJ_P0037235 protein_coding protein_coding MGP_NODShiLtJ_T0037100.1 MGP_NODShiLtJ_G0020506.1 mouse_genomes_project 13 66325705 66349993 - MGP_NODShiLtJ_P0037100 Fbp2 protein_coding protein_coding MGP_NODShiLtJ_T0037304.1 MGP_NODShiLtJ_G0020593.1 mouse_genomes_project 13 78167019 78192919 + MGP_NODShiLtJ_P0037304 Brd9 protein_coding protein_coding MGP_NODShiLtJ_T0037305.1 MGP_NODShiLtJ_G0020593.1 mouse_genomes_project 13 78167037 78192917 + MGP_NODShiLtJ_P0037305 Brd9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036963.1 MGP_NODShiLtJ_G0020454.1 mouse_genomes_project 13 59010857 59016039 - MGP_NODShiLtJ_P0036963 Tifab protein_coding protein_coding MGP_NODShiLtJ_T0098815.1 MGP_NODShiLtJ_G0037209.1 mouse_genomes_project 13 66271227 66271334 + Gm25448 snRNA snRNA MGP_NODShiLtJ_T0011248.1 MGP_NODShiLtJ_G0009381.1 mouse_genomes_project 13 59587539 59587709 + Gm27271 misc_RNA misc_RNA MGP_NODShiLtJ_T0009851.1 MGP_NODShiLtJ_G0007984.1 mouse_genomes_project 13 61342431 61342537 - Mir6369 miRNA miRNA MGP_NODShiLtJ_T0012766.1 MGP_NODShiLtJ_G0010874.1 mouse_genomes_project 13 21347419 21349753 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036256.1 MGP_NODShiLtJ_G0020196.1 mouse_genomes_project 13 22931669 22932062 + MGP_NODShiLtJ_P0036256 Hist1h4d protein_coding protein_coding MGP_NODShiLtJ_T0098809.1 MGP_NODShiLtJ_G0037203.1 mouse_genomes_project 13 45562787 45562895 + Gm23117 snRNA snRNA MGP_NODShiLtJ_T0036731.1 MGP_NODShiLtJ_G0020391.1 mouse_genomes_project 13 54062293 54070978 + MGP_NODShiLtJ_P0036731 Cks2 protein_coding protein_coding MGP_NODShiLtJ_T0012810.1 MGP_NODShiLtJ_G0010918.1 mouse_genomes_project 13 68128317 68129693 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037210.1 MGP_NODShiLtJ_G0020547.1 mouse_genomes_project 13 71154377 71177681 - MGP_NODShiLtJ_P0037210 Zfp953 protein_coding protein_coding MGP_NODShiLtJ_T0101608.1 MGP_NODShiLtJ_G0039777.1 mouse_genomes_project 13 21755082 21755807 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036434.1 MGP_NODShiLtJ_G0020281.1 mouse_genomes_project 13 33834679 33851993 + MGP_NODShiLtJ_P0036434 Serpinb9e protein_coding protein_coding MGP_NODShiLtJ_T0098821.1 MGP_NODShiLtJ_G0037215.1 mouse_genomes_project 13 104978118 104978218 - Gm23955 snRNA snRNA MGP_NODShiLtJ_T0037934.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887235 125898295 + MGP_NODShiLtJ_P0037934 Mocs2 protein_coding protein_coding MGP_NODShiLtJ_T0037935.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887276 125890101 + Mocs2 protein_coding retained_intron MGP_NODShiLtJ_T0037936.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887290 125891021 + Mocs2 protein_coding retained_intron MGP_NODShiLtJ_T0037937.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887302 125898944 + Mocs2 protein_coding retained_intron MGP_NODShiLtJ_T0037938.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887302 125898612 + MGP_NODShiLtJ_P0037938 Mocs2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037939.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887309 125894555 + Mocs2 protein_coding retained_intron MGP_NODShiLtJ_T0037940.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887319 125898482 + MGP_NODShiLtJ_P0037940 Mocs2 protein_coding protein_coding MGP_NODShiLtJ_T0037941.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887326 125898661 + MGP_NODShiLtJ_P0037941 Mocs2 protein_coding protein_coding MGP_NODShiLtJ_T0037942.1 MGP_NODShiLtJ_G0020793.1 mouse_genomes_project 13 125887937 125894263 + MGP_NODShiLtJ_P0037942 Mocs2 protein_coding protein_coding MGP_NODShiLtJ_T0012793.1 MGP_NODShiLtJ_G0010901.1 mouse_genomes_project 13 31004539 31004799 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037349.1 MGP_NODShiLtJ_G0020614.1 mouse_genomes_project 13 80520020 80540599 - MGP_NODShiLtJ_P0037349 Rfesd protein_coding protein_coding MGP_NODShiLtJ_T0037350.1 MGP_NODShiLtJ_G0020614.1 mouse_genomes_project 13 80520020 80540449 - MGP_NODShiLtJ_P0037350 Rfesd protein_coding protein_coding MGP_NODShiLtJ_T0037351.1 MGP_NODShiLtJ_G0020614.1 mouse_genomes_project 13 80520020 80540493 - MGP_NODShiLtJ_P0037351 Rfesd protein_coding protein_coding MGP_NODShiLtJ_T0009852.1 MGP_NODShiLtJ_G0007985.1 mouse_genomes_project 13 61424315 61424423 - Mir7-1 miRNA miRNA MGP_NODShiLtJ_T0036395.1 MGP_NODShiLtJ_G0020257.1 mouse_genomes_project 13 30930307 30983233 + MGP_NODShiLtJ_P0036395 Dusp22 protein_coding protein_coding MGP_NODShiLtJ_T0036396.1 MGP_NODShiLtJ_G0020257.1 mouse_genomes_project 13 30930369 30976923 + MGP_NODShiLtJ_P0036396 Dusp22 protein_coding protein_coding MGP_NODShiLtJ_T0036397.1 MGP_NODShiLtJ_G0020257.1 mouse_genomes_project 13 30930418 30979694 + MGP_NODShiLtJ_P0036397 Dusp22 protein_coding protein_coding MGP_NODShiLtJ_T0012796.1 MGP_NODShiLtJ_G0010904.1 mouse_genomes_project 13 32254649 32255387 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100063.1 MGP_NODShiLtJ_G0038457.1 mouse_genomes_project 13 59002203 59002326 + Gm25148 snoRNA snoRNA MGP_NODShiLtJ_T0036136.1 MGP_NODShiLtJ_G0020116.1 mouse_genomes_project 13 20093448 20099354 + MGP_NODShiLtJ_P0036136 protein_coding protein_coding MGP_NODShiLtJ_T0101646.1 MGP_NODShiLtJ_G0039815.1 mouse_genomes_project 13 116446393 116446949 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037317.1 MGP_NODShiLtJ_G0020600.1 mouse_genomes_project 13 78465879 78541811 - MGP_NODShiLtJ_P0037317 Ahrr protein_coding protein_coding MGP_NODShiLtJ_T0037318.1 MGP_NODShiLtJ_G0020600.1 mouse_genomes_project 13 78468289 78514175 - Ahrr protein_coding retained_intron MGP_NODShiLtJ_T0037319.1 MGP_NODShiLtJ_G0020600.1 mouse_genomes_project 13 78475251 78517302 - Ahrr protein_coding processed_transcript MGP_NODShiLtJ_T0037320.1 MGP_NODShiLtJ_G0020600.1 mouse_genomes_project 13 78477058 78518058 - Ahrr protein_coding processed_transcript MGP_NODShiLtJ_T0036809.1 MGP_NODShiLtJ_G0020413.1 mouse_genomes_project 13 57259929 57260881 + MGP_NODShiLtJ_P0036809 Higd2a protein_coding protein_coding MGP_NODShiLtJ_T0037920.1 MGP_NODShiLtJ_G0020784.1 mouse_genomes_project 13 124003809 124010964 - MGP_NODShiLtJ_P0037920 Gzma protein_coding protein_coding MGP_NODShiLtJ_T0037555.1 MGP_NODShiLtJ_G0020665.1 mouse_genomes_project 13 102324983 102412018 + MGP_NODShiLtJ_P0037555 Dmgdh protein_coding protein_coding MGP_NODShiLtJ_T0037556.1 MGP_NODShiLtJ_G0020665.1 mouse_genomes_project 13 102364377 102365811 + Dmgdh protein_coding processed_transcript MGP_NODShiLtJ_T0036953.1 MGP_NODShiLtJ_G0020452.1 mouse_genomes_project 13 58638117 58644551 - MGP_NODShiLtJ_P0036953 Pitx1 protein_coding protein_coding MGP_NODShiLtJ_T0036954.1 MGP_NODShiLtJ_G0020452.1 mouse_genomes_project 13 58641539 58650512 - MGP_NODShiLtJ_P0036954 Pitx1 protein_coding protein_coding MGP_NODShiLtJ_T0037099.1 MGP_NODShiLtJ_G0020505.1 mouse_genomes_project 13 66240055 66248170 - MGP_NODShiLtJ_P0037099 Gm5141 protein_coding protein_coding MGP_NODShiLtJ_T0036056.1 MGP_NODShiLtJ_G0020085.1 mouse_genomes_project 13 11545048 11765082 + MGP_NODShiLtJ_P0036056 Lyst protein_coding protein_coding MGP_NODShiLtJ_T0036057.1 MGP_NODShiLtJ_G0020085.1 mouse_genomes_project 13 11569944 11766446 + MGP_NODShiLtJ_P0036057 Lyst protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037261.1 MGP_NODShiLtJ_G0020574.1 mouse_genomes_project 13 73615753 73655982 - MGP_NODShiLtJ_P0037261 Ube2ql1 protein_coding protein_coding MGP_NODShiLtJ_T0006464.1 MGP_NODShiLtJ_G0005359.1 mouse_genomes_project 13 27106087 27120145 + 4930511O05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006508.1 MGP_NODShiLtJ_G0005390.1 mouse_genomes_project 13 50669085 50671385 - 6720427I07Rik lincRNA lincRNA MGP_NODShiLtJ_T0036896.1 MGP_NODShiLtJ_G0020430.1 mouse_genomes_project 13 58085685 58088902 + MGP_NODShiLtJ_P0036896 Prelid1 protein_coding protein_coding MGP_NODShiLtJ_T0036618.1 MGP_NODShiLtJ_G0020350.1 mouse_genomes_project 13 48086341 48101998 - MGP_NODShiLtJ_P0036618 Gm10113 protein_coding protein_coding MGP_NODShiLtJ_T0009854.1 MGP_NODShiLtJ_G0007987.1 mouse_genomes_project 13 63701235 63701379 - Gm25000 miRNA miRNA MGP_NODShiLtJ_T0036499.1 MGP_NODShiLtJ_G0020305.1 mouse_genomes_project 13 37986357 38181937 - MGP_NODShiLtJ_P0036499 F13a1 protein_coding protein_coding MGP_NODShiLtJ_T0036500.1 MGP_NODShiLtJ_G0020305.1 mouse_genomes_project 13 37986357 38184407 - MGP_NODShiLtJ_P0036500 F13a1 protein_coding protein_coding MGP_NODShiLtJ_T0037943.1 MGP_NODShiLtJ_G0020794.1 mouse_genomes_project 13 125907291 126011654 - MGP_NODShiLtJ_P0037943 Itga2 protein_coding protein_coding MGP_NODShiLtJ_T0037569.1 MGP_NODShiLtJ_G0020671.1 mouse_genomes_project 13 103533759 103593488 + MGP_NODShiLtJ_P0037569 Tbca protein_coding protein_coding MGP_NODShiLtJ_T0098148.1 MGP_NODShiLtJ_G0036560.1 mouse_genomes_project 13 34351819 34352031 + Gm25043 ribozyme ribozyme MGP_NODShiLtJ_T0100064.1 MGP_NODShiLtJ_G0038458.1 mouse_genomes_project 13 59831823 59831952 - Gm22777 snoRNA snoRNA MGP_NODShiLtJ_T0036471.1 MGP_NODShiLtJ_G0020292.1 mouse_genomes_project 13 35500731 35525373 - MGP_NODShiLtJ_P0036471 Pxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0036472.1 MGP_NODShiLtJ_G0020292.1 mouse_genomes_project 13 35500731 35525383 - MGP_NODShiLtJ_P0036472 Pxdc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036473.1 MGP_NODShiLtJ_G0020292.1 mouse_genomes_project 13 35500732 35525383 - MGP_NODShiLtJ_P0036473 Pxdc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036474.1 MGP_NODShiLtJ_G0020292.1 mouse_genomes_project 13 35501759 35521282 - MGP_NODShiLtJ_P0036474 Pxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0037485.1 MGP_NODShiLtJ_G0020644.1 mouse_genomes_project 13 99881278 100136098 + Ssbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0037486.1 MGP_NODShiLtJ_G0020644.1 mouse_genomes_project 13 99882732 100152080 + MGP_NODShiLtJ_P0037486 Ssbp2 protein_coding protein_coding MGP_NODShiLtJ_T0037487.1 MGP_NODShiLtJ_G0020644.1 mouse_genomes_project 13 99882773 100149894 + MGP_NODShiLtJ_P0037487 Ssbp2 protein_coding protein_coding MGP_NODShiLtJ_T0037488.1 MGP_NODShiLtJ_G0020644.1 mouse_genomes_project 13 99882809 99979175 + MGP_NODShiLtJ_P0037488 Ssbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037489.1 MGP_NODShiLtJ_G0020644.1 mouse_genomes_project 13 99882842 100118914 + Ssbp2 protein_coding retained_intron MGP_NODShiLtJ_T0037490.1 MGP_NODShiLtJ_G0020644.1 mouse_genomes_project 13 99882845 100003803 + Ssbp2 protein_coding retained_intron MGP_NODShiLtJ_T0037491.1 MGP_NODShiLtJ_G0020644.1 mouse_genomes_project 13 99882863 99962425 + Ssbp2 protein_coding retained_intron MGP_NODShiLtJ_T0037492.1 MGP_NODShiLtJ_G0020644.1 mouse_genomes_project 13 100116942 100140100 + Ssbp2 protein_coding retained_intron MGP_NODShiLtJ_T0006534.1 MGP_NODShiLtJ_G0005407.1 mouse_genomes_project 13 73732498 73738647 - Gm26819 lincRNA lincRNA MGP_NODShiLtJ_T0036235.1 MGP_NODShiLtJ_G0020181.1 mouse_genomes_project 13 22328658 22329555 + MGP_NODShiLtJ_P0036235 Vmn1r216 protein_coding protein_coding MGP_NODShiLtJ_T0037205.1 MGP_NODShiLtJ_G0020544.1 mouse_genomes_project 13 71104503 71118592 - MGP_NODShiLtJ_P0037205 Zfp457 protein_coding protein_coding MGP_NODShiLtJ_T0037206.1 MGP_NODShiLtJ_G0020544.1 mouse_genomes_project 13 71117865 71118647 - Zfp457 protein_coding retained_intron MGP_NODShiLtJ_T0036230.1 MGP_NODShiLtJ_G0020176.1 mouse_genomes_project 13 21992493 21993414 - MGP_NODShiLtJ_P0036230 Vmn1r210 protein_coding protein_coding MGP_NODShiLtJ_T0037151.1 MGP_NODShiLtJ_G0020516.1 mouse_genomes_project 13 67774228 67861163 - MGP_NODShiLtJ_P0037151 Cdc14b protein_coding protein_coding MGP_NODShiLtJ_T0037152.1 MGP_NODShiLtJ_G0020516.1 mouse_genomes_project 13 67774228 67835212 - MGP_NODShiLtJ_P0037152 Cdc14b protein_coding protein_coding MGP_NODShiLtJ_T0037153.1 MGP_NODShiLtJ_G0020516.1 mouse_genomes_project 13 67778122 67861069 - MGP_NODShiLtJ_P0037153 Cdc14b protein_coding protein_coding MGP_NODShiLtJ_T0037154.1 MGP_NODShiLtJ_G0020516.1 mouse_genomes_project 13 67779400 67835146 - MGP_NODShiLtJ_P0037154 Cdc14b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036271.1 MGP_NODShiLtJ_G0020207.1 mouse_genomes_project 13 23134713 23135254 - MGP_NODShiLtJ_P0036271 Hist1h4a protein_coding protein_coding MGP_NODShiLtJ_T0012841.1 MGP_NODShiLtJ_G0010949.1 mouse_genomes_project 13 122103520 122103993 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009821.1 MGP_NODShiLtJ_G0007954.1 mouse_genomes_project 13 4201259 4201369 - Gm22689 miRNA miRNA MGP_NODShiLtJ_T0037931.1 MGP_NODShiLtJ_G0020791.1 mouse_genomes_project 13 125293950 125406727 - MGP_NODShiLtJ_P0037931 Ndufs4 protein_coding protein_coding MGP_NODShiLtJ_T0101619.1 MGP_NODShiLtJ_G0039788.1 mouse_genomes_project 13 22227779 22228069 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009845.1 MGP_NODShiLtJ_G0007978.1 mouse_genomes_project 13 54210782 54212144 + miRNA miRNA MGP_NODShiLtJ_T0017217.1 MGP_NODShiLtJ_G0015116.1 mouse_genomes_project 13 20427989 20434438 + 4930470G03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0037845.1 MGP_NODShiLtJ_G0020760.1 mouse_genomes_project 13 118623280 118704493 + MGP_NODShiLtJ_P0037845 Elovl7 protein_coding protein_coding MGP_NODShiLtJ_T0012792.1 MGP_NODShiLtJ_G0010900.1 mouse_genomes_project 13 30644467 30644785 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017232.1 MGP_NODShiLtJ_G0015125.1 mouse_genomes_project 13 36116018 36118501 + 1700011B04Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017233.1 MGP_NODShiLtJ_G0015125.1 mouse_genomes_project 13 36117374 36123754 + 1700011B04Rik processed_transcript lincRNA MGP_NODShiLtJ_T0037070.1 MGP_NODShiLtJ_G0020483.1 mouse_genomes_project 13 62867839 62871919 - MGP_NODShiLtJ_P0037070 1700014D04Rik protein_coding protein_coding MGP_NODShiLtJ_T0037071.1 MGP_NODShiLtJ_G0020483.1 mouse_genomes_project 13 62868953 62869748 - MGP_NODShiLtJ_P0037071 1700014D04Rik protein_coding protein_coding MGP_NODShiLtJ_T0037072.1 MGP_NODShiLtJ_G0020483.1 mouse_genomes_project 13 62870704 62873757 - MGP_NODShiLtJ_P0037072 1700014D04Rik protein_coding protein_coding MGP_NODShiLtJ_T0036728.1 MGP_NODShiLtJ_G0020388.1 mouse_genomes_project 13 53545147 53549310 + MGP_NODShiLtJ_P0036728 Nxnl2 protein_coding protein_coding MGP_NODShiLtJ_T0036865.1 MGP_NODShiLtJ_G0020423.1 mouse_genomes_project 13 57736957 57752279 - MGP_NODShiLtJ_P0036865 Hk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036866.1 MGP_NODShiLtJ_G0020423.1 mouse_genomes_project 13 57736991 57752228 - MGP_NODShiLtJ_P0036866 Hk3 protein_coding protein_coding MGP_NODShiLtJ_T0036867.1 MGP_NODShiLtJ_G0020423.1 mouse_genomes_project 13 57737033 57751887 - MGP_NODShiLtJ_P0036867 Hk3 protein_coding protein_coding MGP_NODShiLtJ_T0036868.1 MGP_NODShiLtJ_G0020423.1 mouse_genomes_project 13 57746012 57752280 - MGP_NODShiLtJ_P0036868 Hk3 protein_coding protein_coding MGP_NODShiLtJ_T0036869.1 MGP_NODShiLtJ_G0020423.1 mouse_genomes_project 13 57746062 57752305 - MGP_NODShiLtJ_P0036869 Hk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036870.1 MGP_NODShiLtJ_G0020423.1 mouse_genomes_project 13 57746750 57752200 - MGP_NODShiLtJ_P0036870 Hk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009868.1 MGP_NODShiLtJ_G0008001.1 mouse_genomes_project 13 103255616 103255730 + Gm25109 miRNA miRNA MGP_NODShiLtJ_T0098820.1 MGP_NODShiLtJ_G0037214.1 mouse_genomes_project 13 104749034 104749193 - Gm24032 snRNA snRNA MGP_NODShiLtJ_T0037651.1 MGP_NODShiLtJ_G0020700.1 mouse_genomes_project 13 107393152 107403738 + MGP_NODShiLtJ_P0037651 Ankra2 protein_coding protein_coding MGP_NODShiLtJ_T0037652.1 MGP_NODShiLtJ_G0020700.1 mouse_genomes_project 13 107393202 107404221 + MGP_NODShiLtJ_P0037652 Ankra2 protein_coding protein_coding MGP_NODShiLtJ_T0037653.1 MGP_NODShiLtJ_G0020700.1 mouse_genomes_project 13 107393205 107404223 + MGP_NODShiLtJ_P0037653 Ankra2 protein_coding protein_coding MGP_NODShiLtJ_T0037654.1 MGP_NODShiLtJ_G0020700.1 mouse_genomes_project 13 107393270 107405055 + MGP_NODShiLtJ_P0037654 Ankra2 protein_coding protein_coding MGP_NODShiLtJ_T0037655.1 MGP_NODShiLtJ_G0020700.1 mouse_genomes_project 13 107398734 107401772 + Ankra2 protein_coding retained_intron MGP_NODShiLtJ_T0011253.1 MGP_NODShiLtJ_G0009386.1 mouse_genomes_project 13 118933345 118933600 - Gm27572 misc_RNA misc_RNA MGP_NODShiLtJ_T0036713.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52757140 52773046 + MGP_NODShiLtJ_P0036713 Fbxw17 protein_coding protein_coding MGP_NODShiLtJ_T0036714.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52757157 52764933 + MGP_NODShiLtJ_P0036714 Fbxw17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036715.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52757162 52769534 + Fbxw17 protein_coding processed_transcript MGP_NODShiLtJ_T0036716.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52757162 52773057 + MGP_NODShiLtJ_P0036716 Fbxw17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036717.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52757171 52759556 + Fbxw17 protein_coding retained_intron MGP_NODShiLtJ_T0036718.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52763131 52766567 + Fbxw17 protein_coding processed_transcript MGP_NODShiLtJ_T0036719.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52769246 52771387 + Fbxw17 protein_coding retained_intron MGP_NODShiLtJ_T0036720.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52770397 52773053 + Fbxw17 protein_coding retained_intron MGP_NODShiLtJ_T0036721.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52770447 52771653 + Fbxw17 protein_coding retained_intron MGP_NODShiLtJ_T0036722.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52770633 52771516 + Fbxw17 protein_coding retained_intron MGP_NODShiLtJ_T0036723.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52770933 52773048 + MGP_NODShiLtJ_P0036723 Fbxw17 protein_coding protein_coding MGP_NODShiLtJ_T0036724.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52770952 52771630 + Fbxw17 protein_coding retained_intron MGP_NODShiLtJ_T0036725.1 MGP_NODShiLtJ_G0020385.1 mouse_genomes_project 13 52771461 52773040 + MGP_NODShiLtJ_P0036725 Fbxw17 protein_coding protein_coding MGP_NODShiLtJ_T0037292.1 MGP_NODShiLtJ_G0020589.1 mouse_genomes_project 13 77897081 77919138 - MGP_NODShiLtJ_P0037292 Slc6a19 protein_coding protein_coding MGP_NODShiLtJ_T0037293.1 MGP_NODShiLtJ_G0020589.1 mouse_genomes_project 13 77897083 77919053 - Slc6a19 protein_coding retained_intron MGP_NODShiLtJ_T0037294.1 MGP_NODShiLtJ_G0020589.1 mouse_genomes_project 13 77897083 77909970 - Slc6a19 protein_coding processed_transcript MGP_NODShiLtJ_T0037295.1 MGP_NODShiLtJ_G0020589.1 mouse_genomes_project 13 77906424 77923244 - Slc6a19 protein_coding processed_transcript MGP_NODShiLtJ_T0037296.1 MGP_NODShiLtJ_G0020589.1 mouse_genomes_project 13 77906906 77909713 - Slc6a19 protein_coding processed_transcript MGP_NODShiLtJ_T0037297.1 MGP_NODShiLtJ_G0020589.1 mouse_genomes_project 13 77907074 77919039 - MGP_NODShiLtJ_P0037297 Slc6a19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037298.1 MGP_NODShiLtJ_G0020589.1 mouse_genomes_project 13 77907112 77909591 - Slc6a19 protein_coding processed_transcript MGP_NODShiLtJ_T0003455.1 MGP_NODShiLtJ_G0003146.1 mouse_genomes_project 13 122330807 122339991 - Gm15288 antisense antisense MGP_NODShiLtJ_T0036998.1 MGP_NODShiLtJ_G0020468.1 mouse_genomes_project 13 61176969 61184343 + MGP_NODShiLtJ_P0036998 Idnk protein_coding protein_coding MGP_NODShiLtJ_T0036999.1 MGP_NODShiLtJ_G0020468.1 mouse_genomes_project 13 61176969 61184343 + MGP_NODShiLtJ_P0036999 Idnk protein_coding protein_coding MGP_NODShiLtJ_T0037355.1 MGP_NODShiLtJ_G0020617.1 mouse_genomes_project 13 80622147 80722193 + MGP_NODShiLtJ_P0037355 Ttc37 protein_coding protein_coding MGP_NODShiLtJ_T0037356.1 MGP_NODShiLtJ_G0020617.1 mouse_genomes_project 13 80622203 80724262 + MGP_NODShiLtJ_P0037356 Ttc37 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036663.1 MGP_NODShiLtJ_G0020367.1 mouse_genomes_project 13 50956966 51030231 - MGP_NODShiLtJ_P0036663 Phf2 protein_coding protein_coding MGP_NODShiLtJ_T0011240.1 MGP_NODShiLtJ_G0009373.1 mouse_genomes_project 13 40175664 40175892 - Gm22035 misc_RNA misc_RNA MGP_NODShiLtJ_T0000861.1 MGP_NODShiLtJ_G0000790.1 mouse_genomes_project 13 54469174 54471328 - TEC TEC MGP_NODShiLtJ_T0012795.1 MGP_NODShiLtJ_G0010903.1 mouse_genomes_project 13 31503949 31504519 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037157.1 MGP_NODShiLtJ_G0020519.1 mouse_genomes_project 13 68037007 68044164 + MGP_NODShiLtJ_P0037157 Cdk20 protein_coding protein_coding MGP_NODShiLtJ_T0037357.1 MGP_NODShiLtJ_G0020618.1 mouse_genomes_project 13 80938891 81665402 + MGP_NODShiLtJ_P0037357 Mctp1 protein_coding protein_coding MGP_NODShiLtJ_T0037358.1 MGP_NODShiLtJ_G0020618.1 mouse_genomes_project 13 81178458 81377965 + MGP_NODShiLtJ_P0037358 Mctp1 protein_coding protein_coding MGP_NODShiLtJ_T0037359.1 MGP_NODShiLtJ_G0020618.1 mouse_genomes_project 13 81178512 81345383 + MGP_NODShiLtJ_P0037359 Mctp1 protein_coding protein_coding MGP_NODShiLtJ_T0037360.1 MGP_NODShiLtJ_G0020618.1 mouse_genomes_project 13 81178545 81663554 + MGP_NODShiLtJ_P0037360 Mctp1 protein_coding protein_coding MGP_NODShiLtJ_T0037361.1 MGP_NODShiLtJ_G0020618.1 mouse_genomes_project 13 81335388 81441230 + Mctp1 protein_coding retained_intron MGP_NODShiLtJ_T0037362.1 MGP_NODShiLtJ_G0020618.1 mouse_genomes_project 13 81437602 81440471 + Mctp1 protein_coding retained_intron MGP_NODShiLtJ_T0037363.1 MGP_NODShiLtJ_G0020618.1 mouse_genomes_project 13 81437841 81664340 + Mctp1 protein_coding retained_intron MGP_NODShiLtJ_T0037364.1 MGP_NODShiLtJ_G0020618.1 mouse_genomes_project 13 81437878 81440673 + Mctp1 protein_coding retained_intron MGP_NODShiLtJ_T0012837.1 MGP_NODShiLtJ_G0010945.1 mouse_genomes_project 13 110450178 110451146 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036038.1 MGP_NODShiLtJ_G0020076.1 mouse_genomes_project 13 9891312 9970643 - MGP_NODShiLtJ_P0036038 Mtr protein_coding protein_coding MGP_NODShiLtJ_T0101616.1 MGP_NODShiLtJ_G0039785.1 mouse_genomes_project 13 22043796 22044757 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037666.1 MGP_NODShiLtJ_G0020704.1 mouse_genomes_project 13 107636244 107638898 - MGP_NODShiLtJ_P0037666 Gm10320 protein_coding protein_coding MGP_NODShiLtJ_T0037493.1 MGP_NODShiLtJ_G0020645.1 mouse_genomes_project 13 100196363 100246050 + MGP_NODShiLtJ_P0037493 Acot12 protein_coding protein_coding MGP_NODShiLtJ_T0037494.1 MGP_NODShiLtJ_G0020645.1 mouse_genomes_project 13 100196384 100219458 + Acot12 protein_coding retained_intron MGP_NODShiLtJ_T0037495.1 MGP_NODShiLtJ_G0020645.1 mouse_genomes_project 13 100239232 100244806 + Acot12 protein_coding processed_transcript MGP_NODShiLtJ_T0036190.1 MGP_NODShiLtJ_G0020146.1 mouse_genomes_project 13 20811141 20811608 - MGP_NODShiLtJ_P0036190 Hist1h2ad protein_coding protein_coding MGP_NODShiLtJ_T0036076.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12065077 12134900 + protein_coding processed_transcript MGP_NODShiLtJ_T0036077.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12065629 12205254 + MGP_NODShiLtJ_P0036077 protein_coding protein_coding MGP_NODShiLtJ_T0036078.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12065630 12236635 + MGP_NODShiLtJ_P0036078 protein_coding protein_coding MGP_NODShiLtJ_T0036079.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12065637 12236871 + MGP_NODShiLtJ_P0036079 protein_coding protein_coding MGP_NODShiLtJ_T0036080.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12065637 12236630 + MGP_NODShiLtJ_P0036080 protein_coding protein_coding MGP_NODShiLtJ_T0036081.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12065644 12200976 + MGP_NODShiLtJ_P0036081 protein_coding protein_coding MGP_NODShiLtJ_T0036082.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12065900 12126642 + protein_coding processed_transcript MGP_NODShiLtJ_T0036083.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12205272 12230148 + MGP_NODShiLtJ_P0036083 protein_coding protein_coding MGP_NODShiLtJ_T0036084.1 MGP_NODShiLtJ_G0020091.1 mouse_genomes_project 13 12227599 12234177 + protein_coding processed_transcript MGP_NODShiLtJ_T0036463.1 MGP_NODShiLtJ_G0020288.1 mouse_genomes_project 13 34875076 34913452 + MGP_NODShiLtJ_P0036463 Bphl protein_coding protein_coding MGP_NODShiLtJ_T0012776.1 MGP_NODShiLtJ_G0010884.1 mouse_genomes_project 13 23695495 23695907 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098271.1 MGP_NODShiLtJ_G0036679.1 mouse_genomes_project 13 44600423 44609254 + Gm15809 sense_intronic sense_intronic MGP_NODShiLtJ_T0036096.1 MGP_NODShiLtJ_G0020098.1 mouse_genomes_project 13 15345725 16291796 - MGP_NODShiLtJ_P0036096 Sugct protein_coding protein_coding MGP_NODShiLtJ_T0006521.1 MGP_NODShiLtJ_G0005396.1 mouse_genomes_project 13 57608735 57609279 + Gm29431 lincRNA lincRNA MGP_NODShiLtJ_T0036588.1 MGP_NODShiLtJ_G0020342.1 mouse_genomes_project 13 45261128 45338212 + MGP_NODShiLtJ_P0036588 Rnf182 protein_coding protein_coding MGP_NODShiLtJ_T0036589.1 MGP_NODShiLtJ_G0020342.1 mouse_genomes_project 13 45261401 45335298 + MGP_NODShiLtJ_P0036589 Rnf182 protein_coding protein_coding MGP_NODShiLtJ_T0017239.1 MGP_NODShiLtJ_G0015130.1 mouse_genomes_project 13 97807571 97931415 + Gm4117 processed_transcript processed_transcript MGP_NODShiLtJ_T0017240.1 MGP_NODShiLtJ_G0015130.1 mouse_genomes_project 13 97807575 97989743 + Gm4117 processed_transcript processed_transcript MGP_NODShiLtJ_T0006570.1 MGP_NODShiLtJ_G0005432.1 mouse_genomes_project 13 110272777 110413562 + Gm29502 lincRNA lincRNA MGP_NODShiLtJ_T0037156.1 MGP_NODShiLtJ_G0020518.1 mouse_genomes_project 13 67955763 67962774 - MGP_NODShiLtJ_P0037156 Ctsl protein_coding protein_coding MGP_NODShiLtJ_T0037953.1 MGP_NODShiLtJ_G0020800.1 mouse_genomes_project 13 128749888 128805248 + MGP_NODShiLtJ_P0037953 Emb protein_coding protein_coding MGP_NODShiLtJ_T0003421.1 MGP_NODShiLtJ_G0003128.1 mouse_genomes_project 13 74559563 74563999 + 1700100L14Rik antisense antisense MGP_NODShiLtJ_T0003422.1 MGP_NODShiLtJ_G0003128.1 mouse_genomes_project 13 74559602 74563994 + 1700100L14Rik antisense antisense MGP_NODShiLtJ_T0037667.1 MGP_NODShiLtJ_G0020705.1 mouse_genomes_project 13 107816997 107819436 - MGP_NODShiLtJ_P0037667 Tmem174 protein_coding protein_coding MGP_NODShiLtJ_T0011245.1 MGP_NODShiLtJ_G0009378.1 mouse_genomes_project 13 59582081 59582330 + Gm27698 misc_RNA misc_RNA MGP_NODShiLtJ_T0006575.1 MGP_NODShiLtJ_G0005436.1 mouse_genomes_project 13 122104157 122111009 - Gm6270 lincRNA lincRNA MGP_NODShiLtJ_T0037966.1 MGP_NODShiLtJ_G0020806.1 mouse_genomes_project 13 131501288 131533159 + MGP_NODShiLtJ_P0037966 Paip1 protein_coding protein_coding MGP_NODShiLtJ_T0037967.1 MGP_NODShiLtJ_G0020806.1 mouse_genomes_project 13 131501485 131532260 + MGP_NODShiLtJ_P0037967 Paip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037968.1 MGP_NODShiLtJ_G0020806.1 mouse_genomes_project 13 131501499 131535264 + MGP_NODShiLtJ_P0037968 Paip1 protein_coding protein_coding MGP_NODShiLtJ_T0037969.1 MGP_NODShiLtJ_G0020806.1 mouse_genomes_project 13 131501499 131532242 + MGP_NODShiLtJ_P0037969 Paip1 protein_coding protein_coding MGP_NODShiLtJ_T0037970.1 MGP_NODShiLtJ_G0020806.1 mouse_genomes_project 13 131501524 131525080 + MGP_NODShiLtJ_P0037970 Paip1 protein_coding protein_coding MGP_NODShiLtJ_T0037971.1 MGP_NODShiLtJ_G0020806.1 mouse_genomes_project 13 131513103 131532172 + MGP_NODShiLtJ_P0037971 Paip1 protein_coding protein_coding MGP_NODShiLtJ_T0037972.1 MGP_NODShiLtJ_G0020806.1 mouse_genomes_project 13 131524568 131526092 + Paip1 protein_coding retained_intron MGP_NODShiLtJ_T0036109.1 MGP_NODShiLtJ_G0020105.1 mouse_genomes_project 13 17435064 17599045 + MGP_NODShiLtJ_P0036109 Vps41 protein_coding protein_coding MGP_NODShiLtJ_T0037312.1 MGP_NODShiLtJ_G0020597.1 mouse_genomes_project 13 78271150 78298126 - MGP_NODShiLtJ_P0037312 Cep72 protein_coding protein_coding MGP_NODShiLtJ_T0037191.1 MGP_NODShiLtJ_G0020536.1 mouse_genomes_project 13 70825733 70848295 - MGP_NODShiLtJ_P0037191 Zfp712 protein_coding protein_coding MGP_NODShiLtJ_T0006453.1 MGP_NODShiLtJ_G0005350.1 mouse_genomes_project 13 10397984 10414150 - lincRNA lincRNA MGP_NODShiLtJ_T0037502.1 MGP_NODShiLtJ_G0020648.1 mouse_genomes_project 13 100340798 100600156 - MGP_NODShiLtJ_P0037502 Rasgrf2 protein_coding protein_coding MGP_NODShiLtJ_T0037503.1 MGP_NODShiLtJ_G0020648.1 mouse_genomes_project 13 100344826 100600156 - MGP_NODShiLtJ_P0037503 Rasgrf2 protein_coding protein_coding MGP_NODShiLtJ_T0037504.1 MGP_NODShiLtJ_G0020648.1 mouse_genomes_project 13 100426817 100455399 - MGP_NODShiLtJ_P0037504 Rasgrf2 protein_coding protein_coding MGP_NODShiLtJ_T0037505.1 MGP_NODShiLtJ_G0020648.1 mouse_genomes_project 13 100482828 100485237 - MGP_NODShiLtJ_P0037505 Rasgrf2 protein_coding protein_coding MGP_NODShiLtJ_T0037506.1 MGP_NODShiLtJ_G0020648.1 mouse_genomes_project 13 100482828 100600318 - MGP_NODShiLtJ_P0037506 Rasgrf2 protein_coding protein_coding MGP_NODShiLtJ_T0100056.1 MGP_NODShiLtJ_G0038450.1 mouse_genomes_project 13 46603805 46603924 - Gm22213 snoRNA snoRNA MGP_NODShiLtJ_T0037501.1 MGP_NODShiLtJ_G0020647.1 mouse_genomes_project 13 100312606 100337280 - MGP_NODShiLtJ_P0037501 Ckmt2 protein_coding protein_coding MGP_NODShiLtJ_T0037026.1 MGP_NODShiLtJ_G0020476.1 mouse_genomes_project 13 61869136 62006880 + MGP_NODShiLtJ_P0037026 protein_coding protein_coding MGP_NODShiLtJ_T0037027.1 MGP_NODShiLtJ_G0020476.1 mouse_genomes_project 13 61870440 62211224 + MGP_NODShiLtJ_P0037027 protein_coding protein_coding MGP_NODShiLtJ_T0036262.1 MGP_NODShiLtJ_G0020200.1 mouse_genomes_project 13 23058396 23059122 + MGP_NODShiLtJ_P0036262 Hist1h1t protein_coding protein_coding MGP_NODShiLtJ_T0097933.1 MGP_NODShiLtJ_G0036345.1 mouse_genomes_project 13 124330244 124330345 + Gm22385 rRNA rRNA MGP_NODShiLtJ_T0037275.1 MGP_NODShiLtJ_G0020581.1 mouse_genomes_project 13 77449370 77459558 + MGP_NODShiLtJ_P0037275 Irx4 protein_coding protein_coding MGP_NODShiLtJ_T0037276.1 MGP_NODShiLtJ_G0020581.1 mouse_genomes_project 13 77449388 77459558 + MGP_NODShiLtJ_P0037276 Irx4 protein_coding protein_coding MGP_NODShiLtJ_T0036134.1 MGP_NODShiLtJ_G0020114.1 mouse_genomes_project 13 19736763 19973655 + MGP_NODShiLtJ_P0036134 Aoah protein_coding protein_coding MGP_NODShiLtJ_T0037202.1 MGP_NODShiLtJ_G0020541.1 mouse_genomes_project 13 70974418 71021655 + MGP_NODShiLtJ_P0037202 protein_coding protein_coding MGP_NODShiLtJ_T0036554.1 MGP_NODShiLtJ_G0020329.1 mouse_genomes_project 13 42786160 42839627 - MGP_NODShiLtJ_P0036554 Nedd9 protein_coding protein_coding MGP_NODShiLtJ_T0036555.1 MGP_NODShiLtJ_G0020329.1 mouse_genomes_project 13 42786160 42970613 - MGP_NODShiLtJ_P0036555 Nedd9 protein_coding protein_coding MGP_NODShiLtJ_T0036556.1 MGP_NODShiLtJ_G0020329.1 mouse_genomes_project 13 42786227 42839490 - MGP_NODShiLtJ_P0036556 Nedd9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036623.1 MGP_NODShiLtJ_G0020354.1 mouse_genomes_project 13 48600871 48609971 + MGP_NODShiLtJ_P0036623 protein_coding protein_coding MGP_NODShiLtJ_T0036624.1 MGP_NODShiLtJ_G0020354.1 mouse_genomes_project 13 48603425 48606049 + protein_coding retained_intron MGP_NODShiLtJ_T0037892.1 MGP_NODShiLtJ_G0020771.1 mouse_genomes_project 13 123110142 123210013 + MGP_NODShiLtJ_P0037892 Ankrd55 protein_coding protein_coding MGP_NODShiLtJ_T0037893.1 MGP_NODShiLtJ_G0020771.1 mouse_genomes_project 13 123110142 123168572 + MGP_NODShiLtJ_P0037893 Ankrd55 protein_coding protein_coding MGP_NODShiLtJ_T0037894.1 MGP_NODShiLtJ_G0020771.1 mouse_genomes_project 13 123110142 123210015 + MGP_NODShiLtJ_P0037894 Ankrd55 protein_coding protein_coding MGP_NODShiLtJ_T0037895.1 MGP_NODShiLtJ_G0020771.1 mouse_genomes_project 13 123110209 123181129 + MGP_NODShiLtJ_P0037895 Ankrd55 protein_coding protein_coding MGP_NODShiLtJ_T0036806.1 MGP_NODShiLtJ_G0020412.1 mouse_genomes_project 13 57253015 57259813 - MGP_NODShiLtJ_P0036806 Nop16 protein_coding protein_coding MGP_NODShiLtJ_T0036807.1 MGP_NODShiLtJ_G0020412.1 mouse_genomes_project 13 57253366 57259781 - MGP_NODShiLtJ_P0036807 Nop16 protein_coding protein_coding MGP_NODShiLtJ_T0036808.1 MGP_NODShiLtJ_G0020412.1 mouse_genomes_project 13 57254069 57259699 - MGP_NODShiLtJ_P0036808 Nop16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037956.1 MGP_NODShiLtJ_G0020803.1 mouse_genomes_project 13 130249340 130250843 + MGP_NODShiLtJ_P0037956 B430218F22Rik protein_coding protein_coding MGP_NODShiLtJ_T0036226.1 MGP_NODShiLtJ_G0020172.1 mouse_genomes_project 13 21667290 21668199 + MGP_NODShiLtJ_P0036226 Vmn1r204 protein_coding protein_coding MGP_NODShiLtJ_T0097762.1 MGP_NODShiLtJ_G0036174.1 mouse_genomes_project 13 120284606 120285006 + pseudogene pseudogene MGP_NODShiLtJ_T0101614.1 MGP_NODShiLtJ_G0039783.1 mouse_genomes_project 13 22006567 22007607 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037484.1 MGP_NODShiLtJ_G0020643.1 mouse_genomes_project 13 99261285 99600913 - MGP_NODShiLtJ_P0037484 Atg10 protein_coding protein_coding MGP_NODShiLtJ_T0036531.1 MGP_NODShiLtJ_G0020318.1 mouse_genomes_project 13 42108801 42113663 + MGP_NODShiLtJ_P0036531 Gm9979 protein_coding protein_coding MGP_NODShiLtJ_T0012816.1 MGP_NODShiLtJ_G0010924.1 mouse_genomes_project 13 73696114 73696403 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037982.1 MGP_NODShiLtJ_G0020814.1 mouse_genomes_project 13 132007590 132008318 - MGP_NODShiLtJ_P0037982 protein_coding protein_coding MGP_NODShiLtJ_T0037983.1 MGP_NODShiLtJ_G0020814.1 mouse_genomes_project 13 132007718 132008308 - MGP_NODShiLtJ_P0037983 protein_coding protein_coding MGP_NODShiLtJ_T0037254.1 MGP_NODShiLtJ_G0020573.1 mouse_genomes_project 13 73475083 73516453 - MGP_NODShiLtJ_P0037254 Srd5a1 protein_coding protein_coding MGP_NODShiLtJ_T0037255.1 MGP_NODShiLtJ_G0020573.1 mouse_genomes_project 13 73496160 73516359 - Srd5a1 protein_coding processed_transcript MGP_NODShiLtJ_T0006557.1 MGP_NODShiLtJ_G0005423.1 mouse_genomes_project 13 106282856 106285609 + C430039J16Rik lincRNA lincRNA MGP_NODShiLtJ_T0101627.1 MGP_NODShiLtJ_G0039796.1 mouse_genomes_project 13 22574957 22576986 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003417.1 MGP_NODShiLtJ_G0003125.1 mouse_genomes_project 13 71177746 71183747 + antisense antisense MGP_NODShiLtJ_T0036607.1 MGP_NODShiLtJ_G0020345.1 mouse_genomes_project 13 46691703 46782689 - MGP_NODShiLtJ_P0036607 Dtnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0036608.1 MGP_NODShiLtJ_G0020345.1 mouse_genomes_project 13 46691709 46782689 - MGP_NODShiLtJ_P0036608 Dtnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0000872.1 MGP_NODShiLtJ_G0000801.1 mouse_genomes_project 13 98915448 98915861 + TEC TEC MGP_NODShiLtJ_T0036851.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57504216 57511604 + MGP_NODShiLtJ_P0036851 Tspan17 protein_coding protein_coding MGP_NODShiLtJ_T0036852.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57504242 57511596 + MGP_NODShiLtJ_P0036852 Tspan17 protein_coding protein_coding MGP_NODShiLtJ_T0036853.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57504302 57511015 + MGP_NODShiLtJ_P0036853 Tspan17 protein_coding protein_coding MGP_NODShiLtJ_T0036854.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57504434 57510946 + MGP_NODShiLtJ_P0036854 Tspan17 protein_coding protein_coding MGP_NODShiLtJ_T0036855.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57504434 57511050 + MGP_NODShiLtJ_P0036855 Tspan17 protein_coding protein_coding MGP_NODShiLtJ_T0036856.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57504484 57509976 + MGP_NODShiLtJ_P0036856 Tspan17 protein_coding protein_coding MGP_NODShiLtJ_T0036857.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57507577 57510993 + MGP_NODShiLtJ_P0036857 Tspan17 protein_coding protein_coding MGP_NODShiLtJ_T0036858.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57507708 57511603 + MGP_NODShiLtJ_P0036858 Tspan17 protein_coding protein_coding MGP_NODShiLtJ_T0036859.1 MGP_NODShiLtJ_G0020421.1 mouse_genomes_project 13 57510211 57511596 + Tspan17 protein_coding retained_intron MGP_NODShiLtJ_T0100079.1 MGP_NODShiLtJ_G0038473.1 mouse_genomes_project 13 104135682 104135820 + Snora47 snoRNA snoRNA MGP_NODShiLtJ_T0037721.1 MGP_NODShiLtJ_G0020723.1 mouse_genomes_project 13 109887008 109943548 - MGP_NODShiLtJ_P0037721 Ocln protein_coding protein_coding MGP_NODShiLtJ_T0037722.1 MGP_NODShiLtJ_G0020723.1 mouse_genomes_project 13 109899685 109943508 - MGP_NODShiLtJ_P0037722 Ocln protein_coding protein_coding MGP_NODShiLtJ_T0037092.1 MGP_NODShiLtJ_G0020498.1 mouse_genomes_project 13 64393853 64401771 - MGP_NODShiLtJ_P0037092 Ctsr protein_coding protein_coding MGP_NODShiLtJ_T0036375.1 MGP_NODShiLtJ_G0020251.1 mouse_genomes_project 13 29080735 29085530 - MGP_NODShiLtJ_P0036375 Sox4 protein_coding protein_coding MGP_NODShiLtJ_T0036726.1 MGP_NODShiLtJ_G0020386.1 mouse_genomes_project 13 52808509 52816558 + MGP_NODShiLtJ_P0036726 Nutm2 protein_coding protein_coding MGP_NODShiLtJ_T0009878.1 MGP_NODShiLtJ_G0008011.1 mouse_genomes_project 13 131306064 131306201 - Gm44488 miRNA miRNA MGP_NODShiLtJ_T0101611.1 MGP_NODShiLtJ_G0039780.1 mouse_genomes_project 13 21817773 21818772 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037299.1 MGP_NODShiLtJ_G0020590.1 mouse_genomes_project 13 77986754 78042476 + MGP_NODShiLtJ_P0037299 Slc12a7 protein_coding protein_coding MGP_NODShiLtJ_T0036273.1 MGP_NODShiLtJ_G0020209.1 mouse_genomes_project 13 23137715 23138357 + MGP_NODShiLtJ_P0036273 Hist1h1a protein_coding protein_coding MGP_NODShiLtJ_T0100044.1 MGP_NODShiLtJ_G0038438.1 mouse_genomes_project 13 6369661 6369780 + snoRNA snoRNA MGP_NODShiLtJ_T0035949.1 MGP_NODShiLtJ_G0020057.1 mouse_genomes_project 13 1280870 1295953 + MGP_NODShiLtJ_P0035949 Akr1c21 protein_coding protein_coding MGP_NODShiLtJ_T0035950.1 MGP_NODShiLtJ_G0020057.1 mouse_genomes_project 13 1285414 1289598 + Akr1c21 protein_coding retained_intron MGP_NODShiLtJ_T0017245.1 MGP_NODShiLtJ_G0015134.1 mouse_genomes_project 13 131550465 131553423 - Gm9752 processed_transcript processed_transcript MGP_NODShiLtJ_T0037697.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109402183 109415442 + MGP_NODShiLtJ_P0037697 Smn1 protein_coding protein_coding MGP_NODShiLtJ_T0037698.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109402189 109404474 + Smn1 protein_coding retained_intron MGP_NODShiLtJ_T0037699.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109402189 109405765 + MGP_NODShiLtJ_P0037699 Smn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037700.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109402225 109415232 + MGP_NODShiLtJ_P0037700 Smn1 protein_coding protein_coding MGP_NODShiLtJ_T0037701.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109402255 109408927 + MGP_NODShiLtJ_P0037701 Smn1 protein_coding protein_coding MGP_NODShiLtJ_T0037702.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109403456 109404267 + Smn1 protein_coding retained_intron MGP_NODShiLtJ_T0037703.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109405827 109406583 + Smn1 protein_coding retained_intron MGP_NODShiLtJ_T0037704.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109408755 109415442 + Smn1 protein_coding retained_intron MGP_NODShiLtJ_T0037705.1 MGP_NODShiLtJ_G0020718.1 mouse_genomes_project 13 109413145 109415202 + Smn1 protein_coding retained_intron MGP_NODShiLtJ_T0003377.1 MGP_NODShiLtJ_G0003096.1 mouse_genomes_project 13 13729627 13730943 - Gm26645 antisense antisense MGP_NODShiLtJ_T0012812.1 MGP_NODShiLtJ_G0010920.1 mouse_genomes_project 13 71597210 71598030 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011250.1 MGP_NODShiLtJ_G0009383.1 mouse_genomes_project 13 108257662 108257915 - Gm24733 misc_RNA misc_RNA MGP_NODShiLtJ_T0036211.1 MGP_NODShiLtJ_G0020157.1 mouse_genomes_project 13 21105930 21106310 - MGP_NODShiLtJ_P0036211 Hist1h4m protein_coding protein_coding MGP_NODShiLtJ_T0036532.1 MGP_NODShiLtJ_G0020319.1 mouse_genomes_project 13 42122625 42138749 - MGP_NODShiLtJ_P0036532 Tfap2a protein_coding protein_coding MGP_NODShiLtJ_T0036533.1 MGP_NODShiLtJ_G0020319.1 mouse_genomes_project 13 42123820 42143139 - MGP_NODShiLtJ_P0036533 Tfap2a protein_coding protein_coding MGP_NODShiLtJ_T0101635.1 MGP_NODShiLtJ_G0039804.1 mouse_genomes_project 13 34282480 34306652 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036900.1 MGP_NODShiLtJ_G0020432.1 mouse_genomes_project 13 58108991 58129858 - MGP_NODShiLtJ_P0036900 Lman2 protein_coding protein_coding MGP_NODShiLtJ_T0036777.1 MGP_NODShiLtJ_G0020401.1 mouse_genomes_project 13 55884744 55930805 - MGP_NODShiLtJ_P0036777 Sptlc1 protein_coding protein_coding MGP_NODShiLtJ_T0037634.1 MGP_NODShiLtJ_G0020694.1 mouse_genomes_project 13 106108513 106116759 - MGP_NODShiLtJ_P0037634 Nsa2 protein_coding protein_coding MGP_NODShiLtJ_T0000881.1 MGP_NODShiLtJ_G0000810.1 mouse_genomes_project 13 123041280 123042555 + TEC TEC MGP_NODShiLtJ_T0036633.1 MGP_NODShiLtJ_G0020358.1 mouse_genomes_project 13 48997426 49016666 - MGP_NODShiLtJ_P0036633 Tpmt protein_coding protein_coding MGP_NODShiLtJ_T0036634.1 MGP_NODShiLtJ_G0020358.1 mouse_genomes_project 13 48997435 49016580 - MGP_NODShiLtJ_P0036634 Tpmt protein_coding protein_coding MGP_NODShiLtJ_T0036635.1 MGP_NODShiLtJ_G0020358.1 mouse_genomes_project 13 48997624 49018120 - MGP_NODShiLtJ_P0036635 Tpmt protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036636.1 MGP_NODShiLtJ_G0020358.1 mouse_genomes_project 13 49000891 49016799 - MGP_NODShiLtJ_P0036636 Tpmt protein_coding protein_coding MGP_NODShiLtJ_T0036637.1 MGP_NODShiLtJ_G0020358.1 mouse_genomes_project 13 49000910 49018193 - MGP_NODShiLtJ_P0036637 Tpmt protein_coding protein_coding MGP_NODShiLtJ_T0036638.1 MGP_NODShiLtJ_G0020358.1 mouse_genomes_project 13 49013160 49016600 - Tpmt protein_coding retained_intron MGP_NODShiLtJ_T0036639.1 MGP_NODShiLtJ_G0020358.1 mouse_genomes_project 13 49013570 49016594 - MGP_NODShiLtJ_P0036639 Tpmt protein_coding protein_coding MGP_NODShiLtJ_T0017224.1 MGP_NODShiLtJ_G0015123.1 mouse_genomes_project 13 28568611 28644816 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017225.1 MGP_NODShiLtJ_G0015123.1 mouse_genomes_project 13 28569355 28603056 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017226.1 MGP_NODShiLtJ_G0015123.1 mouse_genomes_project 13 28569355 29014669 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017227.1 MGP_NODShiLtJ_G0015123.1 mouse_genomes_project 13 28569518 28640490 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017228.1 MGP_NODShiLtJ_G0015123.1 mouse_genomes_project 13 28628460 28640649 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017229.1 MGP_NODShiLtJ_G0015123.1 mouse_genomes_project 13 28686088 29012505 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017230.1 MGP_NODShiLtJ_G0015123.1 mouse_genomes_project 13 28792713 29014393 - processed_transcript processed_transcript MGP_NODShiLtJ_T0036838.1 MGP_NODShiLtJ_G0020418.1 mouse_genomes_project 13 57439886 57455469 - MGP_NODShiLtJ_P0036838 Gprin1 protein_coding protein_coding MGP_NODShiLtJ_T0036289.1 MGP_NODShiLtJ_G0020215.1 mouse_genomes_project 13 23316194 23316578 - MGP_NODShiLtJ_P0036289 Hist1h2ba protein_coding protein_coding MGP_NODShiLtJ_T0036049.1 MGP_NODShiLtJ_G0020080.1 mouse_genomes_project 13 10195830 10248726 - MGP_NODShiLtJ_P0036049 Edaradd protein_coding protein_coding MGP_NODShiLtJ_T0000864.1 MGP_NODShiLtJ_G0000793.1 mouse_genomes_project 13 72872568 72874086 + TEC TEC MGP_NODShiLtJ_T0006544.1 MGP_NODShiLtJ_G0005414.1 mouse_genomes_project 13 87372100 87377077 - Gm17259 lincRNA lincRNA MGP_NODShiLtJ_T0036193.1 MGP_NODShiLtJ_G0020149.1 mouse_genomes_project 13 20811897 20813533 + MGP_NODShiLtJ_P0036193 Hist1h2bf protein_coding protein_coding MGP_NODShiLtJ_T0036619.1 MGP_NODShiLtJ_G0020351.1 mouse_genomes_project 13 48196083 48226009 + MGP_NODShiLtJ_P0036619 Stmnd1 protein_coding protein_coding MGP_NODShiLtJ_T0037913.1 MGP_NODShiLtJ_G0020781.1 mouse_genomes_project 13 123924293 123927502 + MGP_NODShiLtJ_P0037913 Cdc20b protein_coding protein_coding MGP_NODShiLtJ_T0037914.1 MGP_NODShiLtJ_G0020781.1 mouse_genomes_project 13 123924561 124001192 + MGP_NODShiLtJ_P0037914 Cdc20b protein_coding protein_coding MGP_NODShiLtJ_T0037915.1 MGP_NODShiLtJ_G0020781.1 mouse_genomes_project 13 123924561 124001192 + MGP_NODShiLtJ_P0037915 Cdc20b protein_coding protein_coding MGP_NODShiLtJ_T0037916.1 MGP_NODShiLtJ_G0020781.1 mouse_genomes_project 13 123924561 124001192 + MGP_NODShiLtJ_P0037916 Cdc20b protein_coding protein_coding MGP_NODShiLtJ_T0037917.1 MGP_NODShiLtJ_G0020781.1 mouse_genomes_project 13 123924569 123927502 + MGP_NODShiLtJ_P0037917 Cdc20b protein_coding protein_coding MGP_NODShiLtJ_T0036408.1 MGP_NODShiLtJ_G0020266.1 mouse_genomes_project 13 32190686 32743969 - MGP_NODShiLtJ_P0036408 Gmds protein_coding protein_coding MGP_NODShiLtJ_T0036409.1 MGP_NODShiLtJ_G0020266.1 mouse_genomes_project 13 32478277 32743842 - Gmds protein_coding retained_intron MGP_NODShiLtJ_T0036410.1 MGP_NODShiLtJ_G0020266.1 mouse_genomes_project 13 32627027 32743881 - MGP_NODShiLtJ_P0036410 Gmds protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037631.1 MGP_NODShiLtJ_G0020692.1 mouse_genomes_project 13 105965791 105983611 - MGP_NODShiLtJ_P0037631 1700029F12Rik protein_coding protein_coding MGP_NODShiLtJ_T0037723.1 MGP_NODShiLtJ_G0020724.1 mouse_genomes_project 13 109983711 110006446 - MGP_NODShiLtJ_P0037723 Marveld2 protein_coding protein_coding MGP_NODShiLtJ_T0037724.1 MGP_NODShiLtJ_G0020724.1 mouse_genomes_project 13 109983711 110006419 - MGP_NODShiLtJ_P0037724 Marveld2 protein_coding protein_coding MGP_NODShiLtJ_T0037725.1 MGP_NODShiLtJ_G0020724.1 mouse_genomes_project 13 109984984 110006386 - MGP_NODShiLtJ_P0037725 Marveld2 protein_coding protein_coding MGP_NODShiLtJ_T0036969.1 MGP_NODShiLtJ_G0020460.1 mouse_genomes_project 13 59390153 59397082 + MGP_NODShiLtJ_P0036969 Fbxl21 protein_coding protein_coding MGP_NODShiLtJ_T0036970.1 MGP_NODShiLtJ_G0020460.1 mouse_genomes_project 13 59390172 59408963 + MGP_NODShiLtJ_P0036970 Fbxl21 protein_coding protein_coding MGP_NODShiLtJ_T0036971.1 MGP_NODShiLtJ_G0020460.1 mouse_genomes_project 13 59390189 59408851 + MGP_NODShiLtJ_P0036971 Fbxl21 protein_coding protein_coding MGP_NODShiLtJ_T0036972.1 MGP_NODShiLtJ_G0020460.1 mouse_genomes_project 13 59390194 59399701 + MGP_NODShiLtJ_P0036972 Fbxl21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0017220.1 MGP_NODShiLtJ_G0015119.1 mouse_genomes_project 13 22631036 22701908 + 4930586N03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0037554.1 MGP_NODShiLtJ_G0020664.1 mouse_genomes_project 13 102306391 102324853 - MGP_NODShiLtJ_P0037554 Bhmt2 protein_coding protein_coding MGP_NODShiLtJ_T0101620.1 MGP_NODShiLtJ_G0039789.1 mouse_genomes_project 13 22268127 22269054 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036374.1 MGP_NODShiLtJ_G0020250.1 mouse_genomes_project 13 28049736 28059616 + MGP_NODShiLtJ_P0036374 Prl4a1 protein_coding protein_coding MGP_NODShiLtJ_T0012756.1 MGP_NODShiLtJ_G0010864.1 mouse_genomes_project 13 18254250 18254699 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037507.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100689619 100844180 - MGP_NODShiLtJ_P0037507 Msh3 protein_coding protein_coding MGP_NODShiLtJ_T0037508.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100689627 100719348 - Msh3 protein_coding processed_transcript MGP_NODShiLtJ_T0037509.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100689628 100750139 - Msh3 protein_coding retained_intron MGP_NODShiLtJ_T0037510.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100689629 100844184 - MGP_NODShiLtJ_P0037510 Msh3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037511.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100689633 100729702 - Msh3 protein_coding retained_intron MGP_NODShiLtJ_T0037512.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100689633 100844188 - MGP_NODShiLtJ_P0037512 Msh3 protein_coding protein_coding MGP_NODShiLtJ_T0037513.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100690004 100713817 - MGP_NODShiLtJ_P0037513 Msh3 protein_coding protein_coding MGP_NODShiLtJ_T0037514.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100729482 100844170 - MGP_NODShiLtJ_P0037514 Msh3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037516.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100796562 100798523 - Msh3 protein_coding retained_intron MGP_NODShiLtJ_T0037517.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100798245 100844181 - MGP_NODShiLtJ_P0037517 Msh3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037518.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100801717 100834524 - Msh3 protein_coding retained_intron MGP_NODShiLtJ_T0037519.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100829817 100843700 - Msh3 protein_coding processed_transcript MGP_NODShiLtJ_T0037520.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100835014 100844138 - Msh3 protein_coding retained_intron MGP_NODShiLtJ_T0037521.1 MGP_NODShiLtJ_G0020649.1 mouse_genomes_project 13 100840311 100844170 - MGP_NODShiLtJ_P0037521 Msh3 protein_coding protein_coding MGP_NODShiLtJ_T0036346.1 MGP_NODShiLtJ_G0020230.1 mouse_genomes_project 13 24683777 24703149 - MGP_NODShiLtJ_P0036346 Nrsn1 protein_coding protein_coding MGP_NODShiLtJ_T0036347.1 MGP_NODShiLtJ_G0020230.1 mouse_genomes_project 13 24683929 24694371 - MGP_NODShiLtJ_P0036347 Nrsn1 protein_coding protein_coding MGP_NODShiLtJ_T0036348.1 MGP_NODShiLtJ_G0020230.1 mouse_genomes_project 13 24685145 24694368 - Nrsn1 protein_coding processed_transcript MGP_NODShiLtJ_T0036349.1 MGP_NODShiLtJ_G0020230.1 mouse_genomes_project 13 24703101 24703570 - Nrsn1 protein_coding processed_transcript MGP_NODShiLtJ_T0036465.1 MGP_NODShiLtJ_G0020290.1 mouse_genomes_project 13 35012032 35024430 + MGP_NODShiLtJ_P0036465 Psmg4 protein_coding protein_coding MGP_NODShiLtJ_T0036466.1 MGP_NODShiLtJ_G0020290.1 mouse_genomes_project 13 35012032 35024434 + MGP_NODShiLtJ_P0036466 Psmg4 protein_coding protein_coding MGP_NODShiLtJ_T0000883.1 MGP_NODShiLtJ_G0000812.1 mouse_genomes_project 13 127703044 127705955 + TEC TEC MGP_NODShiLtJ_T0037180.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70676024 70696314 - MGP_NODShiLtJ_P0037180 Mterf3 protein_coding protein_coding MGP_NODShiLtJ_T0037181.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70691822 70714675 - MGP_NODShiLtJ_P0037181 Mterf3 protein_coding protein_coding MGP_NODShiLtJ_T0037182.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70691828 70714654 - MGP_NODShiLtJ_P0037182 Mterf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037183.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70691920 70699276 - Mterf3 protein_coding processed_transcript MGP_NODShiLtJ_T0037184.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70696726 70714295 - MGP_NODShiLtJ_P0037184 Mterf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037185.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70696756 70710570 - MGP_NODShiLtJ_P0037185 Mterf3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037186.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70703143 70714491 - MGP_NODShiLtJ_P0037186 Mterf3 protein_coding protein_coding MGP_NODShiLtJ_T0037187.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70708618 70710632 - MGP_NODShiLtJ_P0037187 Mterf3 protein_coding protein_coding MGP_NODShiLtJ_T0037188.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70710340 70714625 - MGP_NODShiLtJ_P0037188 Mterf3 protein_coding protein_coding MGP_NODShiLtJ_T0037189.1 MGP_NODShiLtJ_G0020534.1 mouse_genomes_project 13 70712773 70714628 - Mterf3 protein_coding processed_transcript MGP_NODShiLtJ_T0006533.1 MGP_NODShiLtJ_G0005406.1 mouse_genomes_project 13 73006224 73008276 + Gm26844 lincRNA lincRNA MGP_NODShiLtJ_T0036167.1 MGP_NODShiLtJ_G0020129.1 mouse_genomes_project 13 20467225 20467902 - MGP_NODShiLtJ_P0036167 Gm10065 protein_coding protein_coding MGP_NODShiLtJ_T0036137.1 MGP_NODShiLtJ_G0020117.1 mouse_genomes_project 13 20093527 20099300 + MGP_NODShiLtJ_P0036137 protein_coding protein_coding MGP_NODShiLtJ_T0036354.1 MGP_NODShiLtJ_G0020235.1 mouse_genomes_project 13 26880433 26885250 + MGP_NODShiLtJ_P0036354 protein_coding protein_coding MGP_NODShiLtJ_T0009857.1 MGP_NODShiLtJ_G0007990.1 mouse_genomes_project 13 66815971 66816056 - Mir3074-1 miRNA miRNA MGP_NODShiLtJ_T0036129.1 MGP_NODShiLtJ_G0020113.1 mouse_genomes_project 13 19015672 19193574 + Elmo1 protein_coding retained_intron MGP_NODShiLtJ_T0036130.1 MGP_NODShiLtJ_G0020113.1 mouse_genomes_project 13 19015695 19549531 + MGP_NODShiLtJ_P0036130 Elmo1 protein_coding protein_coding MGP_NODShiLtJ_T0036131.1 MGP_NODShiLtJ_G0020113.1 mouse_genomes_project 13 19036517 19278304 + Elmo1 protein_coding retained_intron MGP_NODShiLtJ_T0036132.1 MGP_NODShiLtJ_G0020113.1 mouse_genomes_project 13 19105190 19389842 + MGP_NODShiLtJ_P0036132 Elmo1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036133.1 MGP_NODShiLtJ_G0020113.1 mouse_genomes_project 13 19408825 19535648 + Elmo1 protein_coding retained_intron MGP_NODShiLtJ_T0036404.1 MGP_NODShiLtJ_G0020262.1 mouse_genomes_project 13 31872425 31875625 - MGP_NODShiLtJ_P0036404 A530084C06Rik protein_coding protein_coding MGP_NODShiLtJ_T0036212.1 MGP_NODShiLtJ_G0020158.1 mouse_genomes_project 13 21108911 21110722 + MGP_NODShiLtJ_P0036212 protein_coding protein_coding MGP_NODShiLtJ_T0037078.1 MGP_NODShiLtJ_G0020487.1 mouse_genomes_project 13 63367615 63368617 + MGP_NODShiLtJ_P0037078 Gm5084 protein_coding protein_coding MGP_NODShiLtJ_T0000877.1 MGP_NODShiLtJ_G0000806.1 mouse_genomes_project 13 110964847 110965339 - TEC TEC MGP_NODShiLtJ_T0037630.1 MGP_NODShiLtJ_G0020691.1 mouse_genomes_project 13 105856157 105882674 + MGP_NODShiLtJ_P0037630 Gcnt4 protein_coding protein_coding MGP_NODShiLtJ_T0098793.1 MGP_NODShiLtJ_G0037187.1 mouse_genomes_project 13 14374258 14374365 - Gm22628 snRNA snRNA MGP_NODShiLtJ_T0035943.1 MGP_NODShiLtJ_G0020054.1 mouse_genomes_project 13 903478 911809 - MGP_NODShiLtJ_P0035943 Akr1c12 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035944.1 MGP_NODShiLtJ_G0020054.1 mouse_genomes_project 13 903479 924447 - MGP_NODShiLtJ_P0035944 Akr1c12 protein_coding protein_coding MGP_NODShiLtJ_T0012782.1 MGP_NODShiLtJ_G0010890.1 mouse_genomes_project 13 25178118 25178979 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006572.1 MGP_NODShiLtJ_G0005434.1 mouse_genomes_project 13 111146605 111147221 - Gm29341 lincRNA lincRNA MGP_NODShiLtJ_T0036353.1 MGP_NODShiLtJ_G0020234.1 mouse_genomes_project 13 26880427 26885256 + MGP_NODShiLtJ_P0036353 protein_coding protein_coding MGP_NODShiLtJ_T0036901.1 MGP_NODShiLtJ_G0020433.1 mouse_genomes_project 13 58136802 58151733 + MGP_NODShiLtJ_P0036901 Rgs14 protein_coding protein_coding MGP_NODShiLtJ_T0036902.1 MGP_NODShiLtJ_G0020433.1 mouse_genomes_project 13 58136841 58146491 + MGP_NODShiLtJ_P0036902 Rgs14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036903.1 MGP_NODShiLtJ_G0020433.1 mouse_genomes_project 13 58146214 58151732 + Rgs14 protein_coding retained_intron MGP_NODShiLtJ_T0035951.1 MGP_NODShiLtJ_G0020058.1 mouse_genomes_project 13 1300168 1326697 - MGP_NODShiLtJ_P0035951 Akr1e1 protein_coding protein_coding MGP_NODShiLtJ_T0035952.1 MGP_NODShiLtJ_G0020058.1 mouse_genomes_project 13 1301901 1326697 - MGP_NODShiLtJ_P0035952 Akr1e1 protein_coding protein_coding MGP_NODShiLtJ_T0035953.1 MGP_NODShiLtJ_G0020058.1 mouse_genomes_project 13 1310686 1326657 - Akr1e1 protein_coding processed_transcript MGP_NODShiLtJ_T0100054.1 MGP_NODShiLtJ_G0038448.1 mouse_genomes_project 13 36228719 36228850 - Gm22674 snoRNA snoRNA MGP_NODShiLtJ_T0037924.1 MGP_NODShiLtJ_G0020786.1 mouse_genomes_project 13 124129991 124139159 + MGP_NODShiLtJ_P0037924 Esm1 protein_coding protein_coding MGP_NODShiLtJ_T0037341.1 MGP_NODShiLtJ_G0020609.1 mouse_genomes_project 13 79526454 79569712 + MGP_NODShiLtJ_P0037341 Pcsk1 protein_coding protein_coding MGP_NODShiLtJ_T0037342.1 MGP_NODShiLtJ_G0020609.1 mouse_genomes_project 13 79526544 79543981 + Pcsk1 protein_coding retained_intron MGP_NODShiLtJ_T0036233.1 MGP_NODShiLtJ_G0020179.1 mouse_genomes_project 13 22240390 22241494 + MGP_NODShiLtJ_P0036233 Vmn1r214 protein_coding protein_coding MGP_NODShiLtJ_T0006450.1 MGP_NODShiLtJ_G0005348.1 mouse_genomes_project 13 2842343 2844926 - 1700016G22Rik lincRNA lincRNA MGP_NODShiLtJ_T0006451.1 MGP_NODShiLtJ_G0005348.1 mouse_genomes_project 13 2842343 2844546 - 1700016G22Rik lincRNA lincRNA MGP_NODShiLtJ_T0098802.1 MGP_NODShiLtJ_G0037196.1 mouse_genomes_project 13 32097411 32097519 - Gm25186 snRNA snRNA MGP_NODShiLtJ_T0037568.1 MGP_NODShiLtJ_G0020670.1 mouse_genomes_project 13 103072121 103303507 + MGP_NODShiLtJ_P0037568 Ap3b1 protein_coding protein_coding MGP_NODShiLtJ_T0000878.1 MGP_NODShiLtJ_G0000807.1 mouse_genomes_project 13 111301178 111303347 - TEC TEC MGP_NODShiLtJ_T0037925.1 MGP_NODShiLtJ_G0020787.1 mouse_genomes_project 13 124215610 124293730 + MGP_NODShiLtJ_P0037925 BC067074 protein_coding protein_coding MGP_NODShiLtJ_T0037926.1 MGP_NODShiLtJ_G0020787.1 mouse_genomes_project 13 124261428 124294728 + MGP_NODShiLtJ_P0037926 BC067074 protein_coding protein_coding MGP_NODShiLtJ_T0037927.1 MGP_NODShiLtJ_G0020787.1 mouse_genomes_project 13 124271451 124304456 + MGP_NODShiLtJ_P0037927 BC067074 protein_coding protein_coding MGP_NODShiLtJ_T0098790.1 MGP_NODShiLtJ_G0037184.1 mouse_genomes_project 13 11147724 11147824 - Gm26133 snRNA snRNA MGP_NODShiLtJ_T0037592.1 MGP_NODShiLtJ_G0020675.1 mouse_genomes_project 13 104129658 104142924 + MGP_NODShiLtJ_P0037592 Zbed3 protein_coding protein_coding MGP_NODShiLtJ_T0006471.1 MGP_NODShiLtJ_G0005363.1 mouse_genomes_project 13 30880767 30892568 + 4930519D14Rik lincRNA lincRNA MGP_NODShiLtJ_T0098791.1 MGP_NODShiLtJ_G0037185.1 mouse_genomes_project 13 12090727 12090834 + Gm26129 snRNA snRNA MGP_NODShiLtJ_T0006582.1 MGP_NODShiLtJ_G0005442.1 mouse_genomes_project 13 122804495 122819927 + Gm15323 lincRNA lincRNA MGP_NODShiLtJ_T0037086.1 MGP_NODShiLtJ_G0020493.1 mouse_genomes_project 13 64103754 64106361 - MGP_NODShiLtJ_P0037086 Tpbpb protein_coding protein_coding MGP_NODShiLtJ_T0036559.1 MGP_NODShiLtJ_G0020332.1 mouse_genomes_project 13 43270119 43371957 - MGP_NODShiLtJ_P0036559 Adtrp protein_coding protein_coding MGP_NODShiLtJ_T0036560.1 MGP_NODShiLtJ_G0020332.1 mouse_genomes_project 13 43272598 43372153 - MGP_NODShiLtJ_P0036560 Adtrp protein_coding protein_coding MGP_NODShiLtJ_T0036561.1 MGP_NODShiLtJ_G0020332.1 mouse_genomes_project 13 43273055 43372085 - MGP_NODShiLtJ_P0036561 Adtrp protein_coding protein_coding MGP_NODShiLtJ_T0036562.1 MGP_NODShiLtJ_G0020332.1 mouse_genomes_project 13 43285978 43340402 - MGP_NODShiLtJ_P0036562 Adtrp protein_coding protein_coding MGP_NODShiLtJ_T0098818.1 MGP_NODShiLtJ_G0037212.1 mouse_genomes_project 13 98040239 98040341 - Gm24498 snRNA snRNA MGP_NODShiLtJ_T0037028.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62556188 62556892 - Agtpbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0037029.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62556189 62669777 - MGP_NODShiLtJ_P0037029 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037030.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62556191 62644694 - MGP_NODShiLtJ_P0037030 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037031.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62556531 62669410 - MGP_NODShiLtJ_P0037031 Agtpbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037032.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62556531 62669774 - MGP_NODShiLtJ_P0037032 Agtpbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037033.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62561429 62656927 - MGP_NODShiLtJ_P0037033 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037034.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62581411 62588857 - Agtpbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0037035.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62588099 62669783 - MGP_NODShiLtJ_P0037035 Agtpbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037036.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62601904 62669774 - MGP_NODShiLtJ_P0037036 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037037.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62601914 62669782 - MGP_NODShiLtJ_P0037037 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037038.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62619769 62622592 - Agtpbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0037039.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62620795 62669799 - MGP_NODShiLtJ_P0037039 Agtpbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037040.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62622603 62645576 - Agtpbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0037041.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62626119 62669777 - MGP_NODShiLtJ_P0037041 Agtpbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037042.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62639974 62669767 - MGP_NODShiLtJ_P0037042 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037043.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62642685 62669835 - MGP_NODShiLtJ_P0037043 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037044.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62643408 62669788 - MGP_NODShiLtJ_P0037044 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037045.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62643408 62671267 - MGP_NODShiLtJ_P0037045 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037046.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62643416 62669407 - MGP_NODShiLtJ_P0037046 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037047.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62643546 62699582 - MGP_NODShiLtJ_P0037047 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037048.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62647754 62669525 - MGP_NODShiLtJ_P0037048 Agtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037049.1 MGP_NODShiLtJ_G0020477.1 mouse_genomes_project 13 62693060 62699598 - Agtpbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0037785.1 MGP_NODShiLtJ_G0020738.1 mouse_genomes_project 13 113715201 113803345 - MGP_NODShiLtJ_P0037785 Nln protein_coding protein_coding MGP_NODShiLtJ_T0009837.1 MGP_NODShiLtJ_G0007970.1 mouse_genomes_project 13 39288444 39288560 + Gm27387 miRNA miRNA MGP_NODShiLtJ_T0003391.1 MGP_NODShiLtJ_G0003108.1 mouse_genomes_project 13 32167138 32170178 + Gm11379 antisense antisense MGP_NODShiLtJ_T0036502.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 38961718 39086399 + MGP_NODShiLtJ_P0036502 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0036503.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39013224 39086376 + MGP_NODShiLtJ_P0036503 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0036504.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39013288 39129136 + MGP_NODShiLtJ_P0036504 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0036505.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39013564 39146897 + MGP_NODShiLtJ_P0036505 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0036506.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39014181 39126280 + MGP_NODShiLtJ_P0036506 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0036507.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39014181 39141921 + MGP_NODShiLtJ_P0036507 Rreb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036508.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39014642 39126282 + MGP_NODShiLtJ_P0036508 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0036509.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39049478 39086464 + MGP_NODShiLtJ_P0036509 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0036510.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39080983 39146899 + MGP_NODShiLtJ_P0036510 Rreb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036511.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39081420 39146891 + MGP_NODShiLtJ_P0036511 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0036512.1 MGP_NODShiLtJ_G0020307.1 mouse_genomes_project 13 39141912 39144103 + MGP_NODShiLtJ_P0036512 Rreb1 protein_coding protein_coding MGP_NODShiLtJ_T0006455.1 MGP_NODShiLtJ_G0005352.1 mouse_genomes_project 13 22592843 22597281 + 4933404K08Rik lincRNA lincRNA MGP_NODShiLtJ_T0011252.1 MGP_NODShiLtJ_G0009385.1 mouse_genomes_project 13 113066509 113066790 - Gm24441 misc_RNA misc_RNA MGP_NODShiLtJ_T0037270.1 MGP_NODShiLtJ_G0020580.1 mouse_genomes_project 13 76778137 76784324 + MGP_NODShiLtJ_P0037270 Irx2 protein_coding protein_coding MGP_NODShiLtJ_T0037271.1 MGP_NODShiLtJ_G0020580.1 mouse_genomes_project 13 76778288 76780850 + Irx2 protein_coding processed_transcript MGP_NODShiLtJ_T0037272.1 MGP_NODShiLtJ_G0020580.1 mouse_genomes_project 13 76779949 76781005 + MGP_NODShiLtJ_P0037272 Irx2 protein_coding protein_coding MGP_NODShiLtJ_T0037273.1 MGP_NODShiLtJ_G0020580.1 mouse_genomes_project 13 76782209 76783738 + Irx2 protein_coding retained_intron MGP_NODShiLtJ_T0037274.1 MGP_NODShiLtJ_G0020580.1 mouse_genomes_project 13 76782721 76783895 + MGP_NODShiLtJ_P0037274 Irx2 protein_coding protein_coding MGP_NODShiLtJ_T0006485.1 MGP_NODShiLtJ_G0005373.1 mouse_genomes_project 13 32780667 32784347 - Gm11381 lincRNA lincRNA MGP_NODShiLtJ_T0012783.1 MGP_NODShiLtJ_G0010891.1 mouse_genomes_project 13 25814484 25815001 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012761.1 MGP_NODShiLtJ_G0010869.1 mouse_genomes_project 13 20924545 20925542 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037213.1 MGP_NODShiLtJ_G0020550.1 mouse_genomes_project 13 71259224 71274958 - MGP_NODShiLtJ_P0037213 Zfp459 protein_coding protein_coding MGP_NODShiLtJ_T0036478.1 MGP_NODShiLtJ_G0020296.1 mouse_genomes_project 13 35812318 35855954 + MGP_NODShiLtJ_P0036478 4933417A18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036479.1 MGP_NODShiLtJ_G0020296.1 mouse_genomes_project 13 35812318 35853276 + MGP_NODShiLtJ_P0036479 4933417A18Rik protein_coding protein_coding MGP_NODShiLtJ_T0036967.1 MGP_NODShiLtJ_G0020458.1 mouse_genomes_project 13 59297961 59337688 + MGP_NODShiLtJ_P0036967 Slc25a48 protein_coding protein_coding MGP_NODShiLtJ_T0037685.1 MGP_NODShiLtJ_G0020715.1 mouse_genomes_project 13 109213372 109289560 - MGP_NODShiLtJ_P0037685 Mccc2 protein_coding protein_coding MGP_NODShiLtJ_T0037236.1 MGP_NODShiLtJ_G0020561.1 mouse_genomes_project 13 71728282 71738196 - MGP_NODShiLtJ_P0037236 Gm9894 protein_coding protein_coding MGP_NODShiLtJ_T0098825.1 MGP_NODShiLtJ_G0037219.1 mouse_genomes_project 13 123113858 123113999 + Gm22768 snRNA snRNA MGP_NODShiLtJ_T0011251.1 MGP_NODShiLtJ_G0009384.1 mouse_genomes_project 13 111807059 111807343 + Gm25808 misc_RNA misc_RNA MGP_NODShiLtJ_T0036186.1 MGP_NODShiLtJ_G0020142.1 mouse_genomes_project 13 20763602 20765763 - MGP_NODShiLtJ_P0036186 Hist1h4k protein_coding protein_coding MGP_NODShiLtJ_T0006465.1 MGP_NODShiLtJ_G0005360.1 mouse_genomes_project 13 29074136 29083488 + Gm26735 lincRNA lincRNA MGP_NODShiLtJ_T0000855.1 MGP_NODShiLtJ_G0000785.1 mouse_genomes_project 13 39364243 39365559 - TEC TEC MGP_NODShiLtJ_T0000856.1 MGP_NODShiLtJ_G0000785.1 mouse_genomes_project 13 39365199 39365559 - TEC TEC MGP_NODShiLtJ_T0011237.1 MGP_NODShiLtJ_G0009370.1 mouse_genomes_project 13 11776985 11777275 + Gm25271 misc_RNA misc_RNA MGP_NODShiLtJ_T0037973.1 MGP_NODShiLtJ_G0020807.1 mouse_genomes_project 13 131537699 131563885 + MGP_NODShiLtJ_P0037973 4833420G17Rik protein_coding protein_coding MGP_NODShiLtJ_T0037088.1 MGP_NODShiLtJ_G0020495.1 mouse_genomes_project 13 64141787 64145031 - MGP_NODShiLtJ_P0037088 Tpbpa protein_coding protein_coding MGP_NODShiLtJ_T0037732.1 MGP_NODShiLtJ_G0020728.1 mouse_genomes_project 13 110103480 110133668 - MGP_NODShiLtJ_P0037732 Cdk7 protein_coding protein_coding MGP_NODShiLtJ_T0036730.1 MGP_NODShiLtJ_G0020390.1 mouse_genomes_project 13 53823514 53972697 - MGP_NODShiLtJ_P0036730 Shc3 protein_coding protein_coding MGP_NODShiLtJ_T0009839.1 MGP_NODShiLtJ_G0007972.1 mouse_genomes_project 13 44201841 44201930 + Gm23086 miRNA miRNA MGP_NODShiLtJ_T0037551.1 MGP_NODShiLtJ_G0020662.1 mouse_genomes_project 13 102044868 102124013 - MGP_NODShiLtJ_P0037551 Jmy protein_coding protein_coding MGP_NODShiLtJ_T0012790.1 MGP_NODShiLtJ_G0010898.1 mouse_genomes_project 13 30336256 30336379 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0035999.1 MGP_NODShiLtJ_G0020069.1 mouse_genomes_project 13 6365860 6381762 - MGP_NODShiLtJ_P0035999 protein_coding protein_coding MGP_NODShiLtJ_T0036000.1 MGP_NODShiLtJ_G0020069.1 mouse_genomes_project 13 6365990 6368924 - MGP_NODShiLtJ_P0036000 protein_coding protein_coding MGP_NODShiLtJ_T0101623.1 MGP_NODShiLtJ_G0039792.1 mouse_genomes_project 13 22452898 22453803 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036216.1 MGP_NODShiLtJ_G0020162.1 mouse_genomes_project 13 21280698 21281658 - MGP_NODShiLtJ_P0036216 Vmn1r193 protein_coding protein_coding MGP_NODShiLtJ_T0098270.1 MGP_NODShiLtJ_G0036678.1 mouse_genomes_project 13 29390918 29391762 - Gm11364 sense_intronic sense_intronic MGP_NODShiLtJ_T0036653.1 MGP_NODShiLtJ_G0020363.1 mouse_genomes_project 13 50617209 50646834 - MGP_NODShiLtJ_P0036653 Zfp169 protein_coding protein_coding MGP_NODShiLtJ_T0036654.1 MGP_NODShiLtJ_G0020363.1 mouse_genomes_project 13 50617221 50646792 - MGP_NODShiLtJ_P0036654 Zfp169 protein_coding protein_coding MGP_NODShiLtJ_T0036655.1 MGP_NODShiLtJ_G0020363.1 mouse_genomes_project 13 50618764 50638860 - MGP_NODShiLtJ_P0036655 Zfp169 protein_coding protein_coding MGP_NODShiLtJ_T0036656.1 MGP_NODShiLtJ_G0020363.1 mouse_genomes_project 13 50619016 50638860 - MGP_NODShiLtJ_P0036656 Zfp169 protein_coding protein_coding MGP_NODShiLtJ_T0036657.1 MGP_NODShiLtJ_G0020363.1 mouse_genomes_project 13 50620814 50646808 - MGP_NODShiLtJ_P0036657 Zfp169 protein_coding protein_coding MGP_NODShiLtJ_T0036658.1 MGP_NODShiLtJ_G0020363.1 mouse_genomes_project 13 50620892 50646824 - MGP_NODShiLtJ_P0036658 Zfp169 protein_coding protein_coding MGP_NODShiLtJ_T0036659.1 MGP_NODShiLtJ_G0020363.1 mouse_genomes_project 13 50625648 50646849 - Zfp169 protein_coding retained_intron MGP_NODShiLtJ_T0000862.1 MGP_NODShiLtJ_G0000791.1 mouse_genomes_project 13 67096528 67097488 - TEC TEC MGP_NODShiLtJ_T0011239.1 MGP_NODShiLtJ_G0009372.1 mouse_genomes_project 13 35126013 35126301 - Gm24530 misc_RNA misc_RNA MGP_NODShiLtJ_T0036123.1 MGP_NODShiLtJ_G0020108.1 mouse_genomes_project 13 18446651 18478214 - MGP_NODShiLtJ_P0036123 Epdr1 protein_coding protein_coding MGP_NODShiLtJ_T0098822.1 MGP_NODShiLtJ_G0037216.1 mouse_genomes_project 13 109993174 109993278 + Gm24261 snRNA snRNA MGP_NODShiLtJ_T0036497.1 MGP_NODShiLtJ_G0020304.1 mouse_genomes_project 13 37823112 37831910 - MGP_NODShiLtJ_P0036497 Nrn1 protein_coding protein_coding MGP_NODShiLtJ_T0036498.1 MGP_NODShiLtJ_G0020304.1 mouse_genomes_project 13 37823945 37828102 - MGP_NODShiLtJ_P0036498 Nrn1 protein_coding protein_coding MGP_NODShiLtJ_T0036263.1 MGP_NODShiLtJ_G0020201.1 mouse_genomes_project 13 23060632 23062828 - MGP_NODShiLtJ_P0036263 Hist1h4c protein_coding protein_coding MGP_NODShiLtJ_T0017215.1 MGP_NODShiLtJ_G0015115.1 mouse_genomes_project 13 13699976 13732317 - Gm6556 processed_transcript antisense MGP_NODShiLtJ_T0017216.1 MGP_NODShiLtJ_G0015115.1 mouse_genomes_project 13 13731463 13733392 - Gm6556 processed_transcript TEC MGP_NODShiLtJ_T0036530.1 MGP_NODShiLtJ_G0020317.1 mouse_genomes_project 13 41349297 41658191 - MGP_NODShiLtJ_P0036530 Ofcc1 protein_coding protein_coding MGP_NODShiLtJ_T0037075.1 MGP_NODShiLtJ_G0020485.1 mouse_genomes_project 13 62899432 62951351 - MGP_NODShiLtJ_P0037075 Zcchc6 protein_coding protein_coding MGP_NODShiLtJ_T0037076.1 MGP_NODShiLtJ_G0020485.1 mouse_genomes_project 13 62900345 62951409 - MGP_NODShiLtJ_P0037076 Zcchc6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101624.1 MGP_NODShiLtJ_G0039793.1 mouse_genomes_project 13 22524470 22535348 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003385.1 MGP_NODShiLtJ_G0003103.1 mouse_genomes_project 13 23170262 23180345 - Gm11337 antisense antisense MGP_NODShiLtJ_T0036440.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34739485 34840216 - MGP_NODShiLtJ_P0036440 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036441.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34739485 34757745 - MGP_NODShiLtJ_P0036441 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036442.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34739485 34757630 - MGP_NODShiLtJ_P0036442 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036443.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34739494 34757543 - MGP_NODShiLtJ_P0036443 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036444.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34739799 34743627 - Serpinb6a protein_coding processed_transcript MGP_NODShiLtJ_T0036445.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34740357 34840216 - MGP_NODShiLtJ_P0036445 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036446.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34744493 34757412 - MGP_NODShiLtJ_P0036446 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036447.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34744509 34757502 - MGP_NODShiLtJ_P0036447 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036448.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34744586 34757385 - MGP_NODShiLtJ_P0036448 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036449.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34745191 34757525 - Serpinb6a protein_coding retained_intron MGP_NODShiLtJ_T0036450.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34746881 34757524 - MGP_NODShiLtJ_P0036450 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036451.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34746953 34840189 - MGP_NODShiLtJ_P0036451 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036452.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34751661 34757501 - MGP_NODShiLtJ_P0036452 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036453.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34751674 34840208 - MGP_NODShiLtJ_P0036453 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036454.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34753119 34840162 - MGP_NODShiLtJ_P0036454 Serpinb6a protein_coding protein_coding MGP_NODShiLtJ_T0036457.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34803261 34840189 - Serpinb6a protein_coding processed_transcript MGP_NODShiLtJ_T0036458.1 MGP_NODShiLtJ_G0020285.1 mouse_genomes_project 13 34822913 34840192 - Serpinb6a protein_coding processed_transcript MGP_NODShiLtJ_T0036438.1 MGP_NODShiLtJ_G0020284.1 mouse_genomes_project 13 34700095 34725922 - MGP_NODShiLtJ_P0036438 Serpinb6c protein_coding protein_coding MGP_NODShiLtJ_T0036439.1 MGP_NODShiLtJ_G0020284.1 mouse_genomes_project 13 34700096 34726460 - MGP_NODShiLtJ_P0036439 Serpinb6c protein_coding protein_coding MGP_NODShiLtJ_T0036267.1 MGP_NODShiLtJ_G0020203.1 mouse_genomes_project 13 23107344 23108906 + MGP_NODShiLtJ_P0036267 Hist1h1c protein_coding protein_coding MGP_NODShiLtJ_T0009853.1 MGP_NODShiLtJ_G0007986.1 mouse_genomes_project 13 63452056 63452175 + Gm24999 miRNA miRNA MGP_NODShiLtJ_T0037081.1 MGP_NODShiLtJ_G0020489.1 mouse_genomes_project 13 63973225 63978779 - MGP_NODShiLtJ_P0037081 BC051665 protein_coding protein_coding MGP_NODShiLtJ_T0098823.1 MGP_NODShiLtJ_G0037217.1 mouse_genomes_project 13 113317217 113317324 + Gm24870 snRNA snRNA MGP_NODShiLtJ_T0037269.1 MGP_NODShiLtJ_G0020579.1 mouse_genomes_project 13 76037863 76045230 - MGP_NODShiLtJ_P0037269 Irx1 protein_coding protein_coding MGP_NODShiLtJ_T0098813.1 MGP_NODShiLtJ_G0037207.1 mouse_genomes_project 13 59197510 59197614 - Gm24716 snRNA snRNA MGP_NODShiLtJ_T0036895.1 MGP_NODShiLtJ_G0020429.1 mouse_genomes_project 13 58082853 58085611 - MGP_NODShiLtJ_P0036895 Rab24 protein_coding protein_coding MGP_NODShiLtJ_T0035977.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6198562 6276651 - MGP_NODShiLtJ_P0035977 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035978.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6198589 6275965 - MGP_NODShiLtJ_P0035978 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035979.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6201331 6238841 - MGP_NODShiLtJ_P0035979 Wdr37 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035980.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6208008 6240885 - MGP_NODShiLtJ_P0035980 Wdr37 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035981.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6208066 6245061 - MGP_NODShiLtJ_P0035981 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035982.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6223899 6225775 - Wdr37 protein_coding retained_intron MGP_NODShiLtJ_T0035983.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6232234 6262941 - MGP_NODShiLtJ_P0035983 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035984.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6238883 6276657 - MGP_NODShiLtJ_P0035984 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035985.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6240869 6265503 - MGP_NODShiLtJ_P0035985 Wdr37 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035986.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6241810 6275944 - MGP_NODShiLtJ_P0035986 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035987.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6244022 6275900 - MGP_NODShiLtJ_P0035987 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035988.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6244025 6265500 - MGP_NODShiLtJ_P0035988 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035989.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6244678 6275915 - Wdr37 protein_coding processed_transcript MGP_NODShiLtJ_T0035990.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6245026 6262954 - Wdr37 protein_coding processed_transcript MGP_NODShiLtJ_T0035991.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6248332 6276831 - MGP_NODShiLtJ_P0035991 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0035992.1 MGP_NODShiLtJ_G0020066.1 mouse_genomes_project 13 6265413 6275928 - MGP_NODShiLtJ_P0035992 Wdr37 protein_coding protein_coding MGP_NODShiLtJ_T0003440.1 MGP_NODShiLtJ_G0003137.1 mouse_genomes_project 13 102359020 102372817 - AW495222 antisense antisense MGP_NODShiLtJ_T0003441.1 MGP_NODShiLtJ_G0003137.1 mouse_genomes_project 13 102369026 102372776 - AW495222 antisense antisense MGP_NODShiLtJ_T0036650.1 MGP_NODShiLtJ_G0020361.1 mouse_genomes_project 13 49100429 49231219 + MGP_NODShiLtJ_P0036650 Rnf144b protein_coding protein_coding MGP_NODShiLtJ_T0036651.1 MGP_NODShiLtJ_G0020361.1 mouse_genomes_project 13 49175271 49231219 + MGP_NODShiLtJ_P0036651 Rnf144b protein_coding protein_coding MGP_NODShiLtJ_T0101615.1 MGP_NODShiLtJ_G0039784.1 mouse_genomes_project 13 22036659 22036950 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003457.1 MGP_NODShiLtJ_G0003148.1 mouse_genomes_project 13 130629115 130655477 - Gm16263 antisense antisense MGP_NODShiLtJ_T0002439.1 MGP_NODShiLtJ_G0002348.1 mouse_genomes_project 13 18168863 18177317 + MGP_NODShiLtJ_P0002439 Tcrg-C4 TR_C_gene TR_C_gene MGP_NODShiLtJ_T0037726.1 MGP_NODShiLtJ_G0020725.1 mouse_genomes_project 13 110006639 110042299 - MGP_NODShiLtJ_P0037726 Rad17 protein_coding protein_coding MGP_NODShiLtJ_T0037727.1 MGP_NODShiLtJ_G0020725.1 mouse_genomes_project 13 110006639 110042299 - MGP_NODShiLtJ_P0037727 Rad17 protein_coding protein_coding MGP_NODShiLtJ_T0037306.1 MGP_NODShiLtJ_G0020594.1 mouse_genomes_project 13 78195866 78227755 + MGP_NODShiLtJ_P0037306 Zdhhc11 protein_coding protein_coding MGP_NODShiLtJ_T0035972.1 MGP_NODShiLtJ_G0020064.1 mouse_genomes_project 13 5339483 5345686 - MGP_NODShiLtJ_P0035972 protein_coding protein_coding MGP_NODShiLtJ_T0037686.1 MGP_NODShiLtJ_G0020716.1 mouse_genomes_project 13 109291914 109386408 - MGP_NODShiLtJ_P0037686 Bdp1 protein_coding protein_coding MGP_NODShiLtJ_T0037687.1 MGP_NODShiLtJ_G0020716.1 mouse_genomes_project 13 109291916 109331908 - MGP_NODShiLtJ_P0037687 Bdp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037688.1 MGP_NODShiLtJ_G0020716.1 mouse_genomes_project 13 109297227 109386176 - MGP_NODShiLtJ_P0037688 Bdp1 protein_coding protein_coding MGP_NODShiLtJ_T0037689.1 MGP_NODShiLtJ_G0020716.1 mouse_genomes_project 13 109339739 109344787 - Bdp1 protein_coding retained_intron MGP_NODShiLtJ_T0037690.1 MGP_NODShiLtJ_G0020716.1 mouse_genomes_project 13 109359246 109380914 - MGP_NODShiLtJ_P0037690 Bdp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037691.1 MGP_NODShiLtJ_G0020716.1 mouse_genomes_project 13 109379875 109386215 - MGP_NODShiLtJ_P0037691 Bdp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035954.1 MGP_NODShiLtJ_G0020059.1 mouse_genomes_project 13 1561713 1654179 + MGP_NODShiLtJ_P0035954 Gm5444 protein_coding protein_coding MGP_NODShiLtJ_T0012814.1 MGP_NODShiLtJ_G0010922.1 mouse_genomes_project 13 72660994 72661748 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036192.1 MGP_NODShiLtJ_G0020148.1 mouse_genomes_project 13 20811849 20813528 + MGP_NODShiLtJ_P0036192 Hist1h2bp protein_coding protein_coding MGP_NODShiLtJ_T0035932.1 MGP_NODShiLtJ_G0020047.1 mouse_genomes_project 13 482625 522033 - MGP_NODShiLtJ_P0035932 Net1 protein_coding protein_coding MGP_NODShiLtJ_T0037339.1 MGP_NODShiLtJ_G0020608.1 mouse_genomes_project 13 79047014 79170408 - MGP_NODShiLtJ_P0037339 Cast protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037340.1 MGP_NODShiLtJ_G0020608.1 mouse_genomes_project 13 79048001 79169819 - MGP_NODShiLtJ_P0037340 Cast protein_coding protein_coding MGP_NODShiLtJ_T0101636.1 MGP_NODShiLtJ_G0039805.1 mouse_genomes_project 13 34322836 34334710 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036341.1 MGP_NODShiLtJ_G0020228.1 mouse_genomes_project 13 24436824 24458303 - MGP_NODShiLtJ_P0036341 Mrs2 protein_coding protein_coding MGP_NODShiLtJ_T0003419.1 MGP_NODShiLtJ_G0003126.1 mouse_genomes_project 13 71765430 71826040 - antisense antisense MGP_NODShiLtJ_T0012807.1 MGP_NODShiLtJ_G0010915.1 mouse_genomes_project 13 66967636 66967972 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017221.1 MGP_NODShiLtJ_G0015120.1 mouse_genomes_project 13 22858467 22862423 - Gm11335 processed_transcript processed_transcript MGP_NODShiLtJ_T0036935.1 MGP_NODShiLtJ_G0020443.1 mouse_genomes_project 13 58328332 58360125 - MGP_NODShiLtJ_P0036935 Fam193b protein_coding protein_coding MGP_NODShiLtJ_T0036729.1 MGP_NODShiLtJ_G0020389.1 mouse_genomes_project 13 53801123 53815278 + MGP_NODShiLtJ_P0036729 S1pr3 protein_coding protein_coding MGP_NODShiLtJ_T0098800.1 MGP_NODShiLtJ_G0037194.1 mouse_genomes_project 13 27902350 27902450 + Gm22476 snRNA snRNA MGP_NODShiLtJ_T0101422.1 MGP_NODShiLtJ_G0039618.1 mouse_genomes_project 13 122499399 122501285 - unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0017238.1 MGP_NODShiLtJ_G0015129.1 mouse_genomes_project 13 86356760 86358062 - 1700023H06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017231.1 MGP_NODShiLtJ_G0015124.1 mouse_genomes_project 13 35525624 35539468 + Gm15908 processed_transcript processed_transcript MGP_NODShiLtJ_T0036612.1 MGP_NODShiLtJ_G0020348.1 mouse_genomes_project 13 47323185 47362392 + MGP_NODShiLtJ_P0036612 Gmpr protein_coding protein_coding MGP_NODShiLtJ_T0036613.1 MGP_NODShiLtJ_G0020348.1 mouse_genomes_project 13 47329595 47361908 + MGP_NODShiLtJ_P0036613 Gmpr protein_coding protein_coding MGP_NODShiLtJ_T0036614.1 MGP_NODShiLtJ_G0020348.1 mouse_genomes_project 13 47354821 47358560 + Gmpr protein_coding retained_intron MGP_NODShiLtJ_T0037002.1 MGP_NODShiLtJ_G0020470.1 mouse_genomes_project 13 61257406 61300416 - MGP_NODShiLtJ_P0037002 Gkap1 protein_coding protein_coding MGP_NODShiLtJ_T0036586.1 MGP_NODShiLtJ_G0020340.1 mouse_genomes_project 13 45036305 45120526 - MGP_NODShiLtJ_P0036586 Ranbp9 protein_coding protein_coding MGP_NODShiLtJ_T0017223.1 MGP_NODShiLtJ_G0015122.1 mouse_genomes_project 13 24379235 24383252 + 9330162012Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017242.1 MGP_NODShiLtJ_G0015132.1 mouse_genomes_project 13 122352633 122422943 + Gm15286 processed_transcript processed_transcript MGP_NODShiLtJ_T0017243.1 MGP_NODShiLtJ_G0015132.1 mouse_genomes_project 13 122392937 122420694 + Gm15286 processed_transcript processed_transcript MGP_NODShiLtJ_T0037250.1 MGP_NODShiLtJ_G0020571.1 mouse_genomes_project 13 73388781 73427042 - MGP_NODShiLtJ_P0037250 Papd7 protein_coding protein_coding MGP_NODShiLtJ_T0037251.1 MGP_NODShiLtJ_G0020571.1 mouse_genomes_project 13 73388784 73426320 - MGP_NODShiLtJ_P0037251 Papd7 protein_coding protein_coding MGP_NODShiLtJ_T0036501.1 MGP_NODShiLtJ_G0020306.1 mouse_genomes_project 13 38509641 38584789 + MGP_NODShiLtJ_P0036501 Ly86 protein_coding protein_coding MGP_NODShiLtJ_T0009867.1 MGP_NODShiLtJ_G0008000.1 mouse_genomes_project 13 102600478 102601647 - miRNA miRNA MGP_NODShiLtJ_T0036477.1 MGP_NODShiLtJ_G0020295.1 mouse_genomes_project 13 35796801 35806830 - MGP_NODShiLtJ_P0036477 Fam217a protein_coding protein_coding MGP_NODShiLtJ_T0037668.1 MGP_NODShiLtJ_G0020706.1 mouse_genomes_project 13 107869169 107877773 - MGP_NODShiLtJ_P0037668 Tmem171 protein_coding protein_coding MGP_NODShiLtJ_T0037669.1 MGP_NODShiLtJ_G0020706.1 mouse_genomes_project 13 107875255 107877707 - MGP_NODShiLtJ_P0037669 Tmem171 protein_coding protein_coding MGP_NODShiLtJ_T0037220.1 MGP_NODShiLtJ_G0020554.1 mouse_genomes_project 13 71384857 71395255 - MGP_NODShiLtJ_P0037220 Zfp87 protein_coding protein_coding MGP_NODShiLtJ_T0037221.1 MGP_NODShiLtJ_G0020554.1 mouse_genomes_project 13 71386653 71395199 - MGP_NODShiLtJ_P0037221 Zfp87 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037222.1 MGP_NODShiLtJ_G0020554.1 mouse_genomes_project 13 71387058 71395224 - MGP_NODShiLtJ_P0037222 Zfp87 protein_coding protein_coding MGP_NODShiLtJ_T0037223.1 MGP_NODShiLtJ_G0020554.1 mouse_genomes_project 13 71390119 71395255 - MGP_NODShiLtJ_P0037223 Zfp87 protein_coding protein_coding MGP_NODShiLtJ_T0036889.1 MGP_NODShiLtJ_G0020426.1 mouse_genomes_project 13 57882173 57882760 - MGP_NODShiLtJ_P0036889 Gm17617 protein_coding protein_coding MGP_NODShiLtJ_T0003453.1 MGP_NODShiLtJ_G0003144.1 mouse_genomes_project 13 117065225 117073244 + Gm28989 antisense antisense MGP_NODShiLtJ_T0036177.1 MGP_NODShiLtJ_G0020135.1 mouse_genomes_project 13 20609673 20610658 - MGP_NODShiLtJ_P0036177 Olfr1362 protein_coding protein_coding MGP_NODShiLtJ_T0036839.1 MGP_NODShiLtJ_G0020419.1 mouse_genomes_project 13 57469791 57473164 + MGP_NODShiLtJ_P0036839 Eif4e1b protein_coding protein_coding MGP_NODShiLtJ_T0036840.1 MGP_NODShiLtJ_G0020419.1 mouse_genomes_project 13 57469794 57472442 + MGP_NODShiLtJ_P0036840 Eif4e1b protein_coding protein_coding MGP_NODShiLtJ_T0036841.1 MGP_NODShiLtJ_G0020419.1 mouse_genomes_project 13 57469794 57473258 + MGP_NODShiLtJ_P0036841 Eif4e1b protein_coding protein_coding MGP_NODShiLtJ_T0036842.1 MGP_NODShiLtJ_G0020419.1 mouse_genomes_project 13 57469794 57473164 + MGP_NODShiLtJ_P0036842 Eif4e1b protein_coding protein_coding MGP_NODShiLtJ_T0036843.1 MGP_NODShiLtJ_G0020419.1 mouse_genomes_project 13 57469794 57472652 + MGP_NODShiLtJ_P0036843 Eif4e1b protein_coding protein_coding MGP_NODShiLtJ_T0036844.1 MGP_NODShiLtJ_G0020419.1 mouse_genomes_project 13 57469796 57473173 + MGP_NODShiLtJ_P0036844 Eif4e1b protein_coding protein_coding MGP_NODShiLtJ_T0036845.1 MGP_NODShiLtJ_G0020419.1 mouse_genomes_project 13 57469796 57473165 + MGP_NODShiLtJ_P0036845 Eif4e1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036846.1 MGP_NODShiLtJ_G0020419.1 mouse_genomes_project 13 57469813 57473265 + MGP_NODShiLtJ_P0036846 Eif4e1b protein_coding protein_coding MGP_NODShiLtJ_T0036098.1 MGP_NODShiLtJ_G0020100.1 mouse_genomes_project 13 16293198 16295036 + MGP_NODShiLtJ_P0036098 protein_coding protein_coding MGP_NODShiLtJ_T0037957.1 MGP_NODShiLtJ_G0020804.1 mouse_genomes_project 13 130603031 130750799 + Fgf10 protein_coding processed_transcript MGP_NODShiLtJ_T0037958.1 MGP_NODShiLtJ_G0020804.1 mouse_genomes_project 13 130603064 130739612 + Fgf10 protein_coding processed_transcript MGP_NODShiLtJ_T0037959.1 MGP_NODShiLtJ_G0020804.1 mouse_genomes_project 13 130654779 130753574 + MGP_NODShiLtJ_P0037959 Fgf10 protein_coding protein_coding MGP_NODShiLtJ_T0101644.1 MGP_NODShiLtJ_G0039813.1 mouse_genomes_project 13 44464286 44465175 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006492.1 MGP_NODShiLtJ_G0005378.1 mouse_genomes_project 13 38682643 38685782 + Gm29590 lincRNA lincRNA MGP_NODShiLtJ_T0012749.1 MGP_NODShiLtJ_G0010857.1 mouse_genomes_project 13 1328145 1328628 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000853.1 MGP_NODShiLtJ_G0000783.1 mouse_genomes_project 13 18228352 18230687 - TEC TEC MGP_NODShiLtJ_T0098814.1 MGP_NODShiLtJ_G0037208.1 mouse_genomes_project 13 64130019 64130118 + Gm24594 snRNA snRNA MGP_NODShiLtJ_T0037471.1 MGP_NODShiLtJ_G0020638.1 mouse_genomes_project 13 97854324 98275552 - MGP_NODShiLtJ_P0037471 Xrcc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037472.1 MGP_NODShiLtJ_G0020638.1 mouse_genomes_project 13 97937925 98275637 - MGP_NODShiLtJ_P0037472 Xrcc4 protein_coding protein_coding MGP_NODShiLtJ_T0037473.1 MGP_NODShiLtJ_G0020638.1 mouse_genomes_project 13 98245211 98275565 - MGP_NODShiLtJ_P0037473 Xrcc4 protein_coding protein_coding MGP_NODShiLtJ_T0037474.1 MGP_NODShiLtJ_G0020638.1 mouse_genomes_project 13 98245246 98275111 - MGP_NODShiLtJ_P0037474 Xrcc4 protein_coding protein_coding MGP_NODShiLtJ_T0036241.1 MGP_NODShiLtJ_G0020187.1 mouse_genomes_project 13 22666690 22681872 - MGP_NODShiLtJ_P0036241 Zfp322a protein_coding protein_coding MGP_NODShiLtJ_T0036242.1 MGP_NODShiLtJ_G0020187.1 mouse_genomes_project 13 22671329 22681664 - MGP_NODShiLtJ_P0036242 Zfp322a protein_coding protein_coding MGP_NODShiLtJ_T0036243.1 MGP_NODShiLtJ_G0020187.1 mouse_genomes_project 13 22671330 22681865 - MGP_NODShiLtJ_P0036243 Zfp322a protein_coding protein_coding MGP_NODShiLtJ_T0036244.1 MGP_NODShiLtJ_G0020187.1 mouse_genomes_project 13 22671491 22681858 - MGP_NODShiLtJ_P0036244 Zfp322a protein_coding protein_coding MGP_NODShiLtJ_T0100075.1 MGP_NODShiLtJ_G0038469.1 mouse_genomes_project 13 87685975 87686106 + Gm24295 snoRNA snoRNA MGP_NODShiLtJ_T0036232.1 MGP_NODShiLtJ_G0020178.1 mouse_genomes_project 13 22213734 22214889 + MGP_NODShiLtJ_P0036232 Vmn1r213 protein_coding protein_coding MGP_NODShiLtJ_T0037435.1 MGP_NODShiLtJ_G0020631.1 mouse_genomes_project 13 90435686 90515174 + MGP_NODShiLtJ_P0037435 Tmem161b protein_coding protein_coding MGP_NODShiLtJ_T0006460.1 MGP_NODShiLtJ_G0005356.1 mouse_genomes_project 13 24041041 24047664 - C530050E15Rik lincRNA lincRNA MGP_NODShiLtJ_T0037203.1 MGP_NODShiLtJ_G0020542.1 mouse_genomes_project 13 71006835 71021789 + MGP_NODShiLtJ_P0037203 protein_coding protein_coding MGP_NODShiLtJ_T0101603.1 MGP_NODShiLtJ_G0039772.1 mouse_genomes_project 13 21548527 21550816 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006540.1 MGP_NODShiLtJ_G0005412.1 mouse_genomes_project 13 86437938 86445053 - Gm4211 lincRNA lincRNA MGP_NODShiLtJ_T0036222.1 MGP_NODShiLtJ_G0020168.1 mouse_genomes_project 13 21475341 21476280 + MGP_NODShiLtJ_P0036222 Vmn1r200 protein_coding protein_coding MGP_NODShiLtJ_T0036180.1 MGP_NODShiLtJ_G0020137.1 mouse_genomes_project 13 20651208 20652162 - MGP_NODShiLtJ_P0036180 Olfr1361 protein_coding protein_coding MGP_NODShiLtJ_T0036407.1 MGP_NODShiLtJ_G0020265.1 mouse_genomes_project 13 32176087 32181755 + MGP_NODShiLtJ_P0036407 Foxc1 protein_coding protein_coding MGP_NODShiLtJ_T0037378.1 MGP_NODShiLtJ_G0020624.1 mouse_genomes_project 13 86355918 86363193 + Arrdc3 protein_coding retained_intron MGP_NODShiLtJ_T0037379.1 MGP_NODShiLtJ_G0020624.1 mouse_genomes_project 13 86355944 86369609 + MGP_NODShiLtJ_P0037379 Arrdc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037380.1 MGP_NODShiLtJ_G0020624.1 mouse_genomes_project 13 86356186 86369609 + MGP_NODShiLtJ_P0037380 Arrdc3 protein_coding protein_coding MGP_NODShiLtJ_T0037381.1 MGP_NODShiLtJ_G0020624.1 mouse_genomes_project 13 86363677 86364826 + Arrdc3 protein_coding retained_intron MGP_NODShiLtJ_T0037382.1 MGP_NODShiLtJ_G0020624.1 mouse_genomes_project 13 86364091 86365216 + Arrdc3 protein_coding retained_intron MGP_NODShiLtJ_T0037307.1 MGP_NODShiLtJ_G0020595.1 mouse_genomes_project 13 78223728 78223914 - MGP_NODShiLtJ_P0037307 Gm10126 protein_coding protein_coding MGP_NODShiLtJ_T0036260.1 MGP_NODShiLtJ_G0020198.1 mouse_genomes_project 13 22974652 22976749 - MGP_NODShiLtJ_P0036260 Hist1h1e protein_coding protein_coding MGP_NODShiLtJ_T0036664.1 MGP_NODShiLtJ_G0020368.1 mouse_genomes_project 13 51039418 51136457 - MGP_NODShiLtJ_P0036664 Fam120a protein_coding protein_coding MGP_NODShiLtJ_T0037813.1 MGP_NODShiLtJ_G0020751.1 mouse_genomes_project 13 115408456 115412897 + MGP_NODShiLtJ_P0037813 Htr1a protein_coding protein_coding MGP_NODShiLtJ_T0037596.1 MGP_NODShiLtJ_G0020678.1 mouse_genomes_project 13 104298186 104299541 - MGP_NODShiLtJ_P0037596 S100z protein_coding protein_coding MGP_NODShiLtJ_T0036778.1 MGP_NODShiLtJ_G0020402.1 mouse_genomes_project 13 56029647 56035792 - MGP_NODShiLtJ_P0036778 Msx2 protein_coding protein_coding MGP_NODShiLtJ_T0036779.1 MGP_NODShiLtJ_G0020402.1 mouse_genomes_project 13 56034223 56035792 - Msx2 protein_coding retained_intron MGP_NODShiLtJ_T0036148.1 MGP_NODShiLtJ_G0020122.1 mouse_genomes_project 13 20318466 20319521 + MGP_NODShiLtJ_P0036148 Olfr1367 protein_coding protein_coding MGP_NODShiLtJ_T0036609.1 MGP_NODShiLtJ_G0020346.1 mouse_genomes_project 13 46863054 46865838 + MGP_NODShiLtJ_P0036609 protein_coding protein_coding MGP_NODShiLtJ_T0098811.1 MGP_NODShiLtJ_G0037205.1 mouse_genomes_project 13 47297532 47297639 - Gm23387 snRNA snRNA MGP_NODShiLtJ_T0012801.1 MGP_NODShiLtJ_G0010909.1 mouse_genomes_project 13 42198151 42199246 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037175.1 MGP_NODShiLtJ_G0020531.1 mouse_genomes_project 13 70664897 70673048 - MGP_NODShiLtJ_P0037175 Uqcrb protein_coding protein_coding MGP_NODShiLtJ_T0037176.1 MGP_NODShiLtJ_G0020531.1 mouse_genomes_project 13 70666398 70670439 - Uqcrb protein_coding processed_transcript MGP_NODShiLtJ_T0003426.1 MGP_NODShiLtJ_G0003131.1 mouse_genomes_project 13 82957080 83003025 + antisense antisense MGP_NODShiLtJ_T0003427.1 MGP_NODShiLtJ_G0003131.1 mouse_genomes_project 13 82962901 83002007 + antisense antisense MGP_NODShiLtJ_T0003428.1 MGP_NODShiLtJ_G0003131.1 mouse_genomes_project 13 82963291 83003856 + antisense antisense MGP_NODShiLtJ_T0003429.1 MGP_NODShiLtJ_G0003131.1 mouse_genomes_project 13 82964208 82998675 + antisense antisense MGP_NODShiLtJ_T0003430.1 MGP_NODShiLtJ_G0003131.1 mouse_genomes_project 13 82964442 83041493 + antisense antisense MGP_NODShiLtJ_T0036921.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58284736 58302376 - MGP_NODShiLtJ_P0036921 Pdlim7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036922.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58286439 58302372 - Pdlim7 protein_coding retained_intron MGP_NODShiLtJ_T0036923.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58287361 58302375 - Pdlim7 protein_coding retained_intron MGP_NODShiLtJ_T0036924.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58287365 58302384 - MGP_NODShiLtJ_P0036924 Pdlim7 protein_coding protein_coding MGP_NODShiLtJ_T0036925.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58287597 58295353 - MGP_NODShiLtJ_P0036925 Pdlim7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036926.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58295710 58302376 - MGP_NODShiLtJ_P0036926 Pdlim7 protein_coding protein_coding MGP_NODShiLtJ_T0036927.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58295711 58302372 - MGP_NODShiLtJ_P0036927 Pdlim7 protein_coding protein_coding MGP_NODShiLtJ_T0036928.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58295711 58302376 - MGP_NODShiLtJ_P0036928 Pdlim7 protein_coding protein_coding MGP_NODShiLtJ_T0036929.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58296489 58297958 - Pdlim7 protein_coding retained_intron MGP_NODShiLtJ_T0036930.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58297170 58302614 - MGP_NODShiLtJ_P0036930 Pdlim7 protein_coding protein_coding MGP_NODShiLtJ_T0036931.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58297747 58302359 - Pdlim7 protein_coding retained_intron MGP_NODShiLtJ_T0036932.1 MGP_NODShiLtJ_G0020440.1 mouse_genomes_project 13 58297903 58301647 - MGP_NODShiLtJ_P0036932 Pdlim7 protein_coding protein_coding MGP_NODShiLtJ_T0036187.1 MGP_NODShiLtJ_G0020143.1 mouse_genomes_project 13 20803989 20804732 - MGP_NODShiLtJ_P0036187 Hist1h1b protein_coding protein_coding MGP_NODShiLtJ_T0003399.1 MGP_NODShiLtJ_G0003114.1 mouse_genomes_project 13 44733215 44741223 - Gm15813 antisense antisense MGP_NODShiLtJ_T0036697.1 MGP_NODShiLtJ_G0020378.1 mouse_genomes_project 13 51752849 51778929 + MGP_NODShiLtJ_P0036697 Aspn protein_coding protein_coding MGP_NODShiLtJ_T0036698.1 MGP_NODShiLtJ_G0020378.1 mouse_genomes_project 13 51752849 51778929 + MGP_NODShiLtJ_P0036698 Aspn protein_coding protein_coding MGP_NODShiLtJ_T0009856.1 MGP_NODShiLtJ_G0007989.1 mouse_genomes_project 13 66815484 66815557 + Mir27b miRNA miRNA MGP_NODShiLtJ_T0037089.1 MGP_NODShiLtJ_G0020496.1 mouse_genomes_project 13 64206849 64212486 - MGP_NODShiLtJ_P0037089 Ctsj protein_coding protein_coding MGP_NODShiLtJ_T0037976.1 MGP_NODShiLtJ_G0020810.1 mouse_genomes_project 13 131857676 131876133 + MGP_NODShiLtJ_P0037976 Hmgcs1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036205.1 MGP_NODShiLtJ_G0020154.1 mouse_genomes_project 13 21058843 21066412 - MGP_NODShiLtJ_P0036205 Prss16 protein_coding protein_coding MGP_NODShiLtJ_T0036206.1 MGP_NODShiLtJ_G0020154.1 mouse_genomes_project 13 21059227 21061890 - Prss16 protein_coding processed_transcript MGP_NODShiLtJ_T0036207.1 MGP_NODShiLtJ_G0020154.1 mouse_genomes_project 13 21059593 21063086 - Prss16 protein_coding processed_transcript MGP_NODShiLtJ_T0036208.1 MGP_NODShiLtJ_G0020154.1 mouse_genomes_project 13 21063902 21066413 - Prss16 protein_coding processed_transcript MGP_NODShiLtJ_T0037322.1 MGP_NODShiLtJ_G0020602.1 mouse_genomes_project 13 78582099 78610504 - MGP_NODShiLtJ_P0037322 Sdha protein_coding protein_coding MGP_NODShiLtJ_T0037323.1 MGP_NODShiLtJ_G0020602.1 mouse_genomes_project 13 78582577 78584100 - Sdha protein_coding retained_intron MGP_NODShiLtJ_T0037324.1 MGP_NODShiLtJ_G0020602.1 mouse_genomes_project 13 78586906 78588083 - Sdha protein_coding retained_intron MGP_NODShiLtJ_T0037325.1 MGP_NODShiLtJ_G0020602.1 mouse_genomes_project 13 78597148 78610426 - Sdha protein_coding processed_transcript MGP_NODShiLtJ_T0037326.1 MGP_NODShiLtJ_G0020602.1 mouse_genomes_project 13 78598681 78599444 - Sdha protein_coding retained_intron MGP_NODShiLtJ_T0037327.1 MGP_NODShiLtJ_G0020602.1 mouse_genomes_project 13 78602923 78610463 - Sdha protein_coding retained_intron MGP_NODShiLtJ_T0037328.1 MGP_NODShiLtJ_G0020602.1 mouse_genomes_project 13 78604391 78610381 - Sdha protein_coding processed_transcript MGP_NODShiLtJ_T0037329.1 MGP_NODShiLtJ_G0020602.1 mouse_genomes_project 13 78604430 78610459 - Sdha protein_coding processed_transcript MGP_NODShiLtJ_T0006459.1 MGP_NODShiLtJ_G0005355.1 mouse_genomes_project 13 23776550 23785708 - Gm11345 lincRNA lincRNA MGP_NODShiLtJ_T0036394.1 MGP_NODShiLtJ_G0020256.1 mouse_genomes_project 13 30795843 30802424 - MGP_NODShiLtJ_P0036394 Uqcrfs1 protein_coding protein_coding MGP_NODShiLtJ_T0037022.1 MGP_NODShiLtJ_G0020475.1 mouse_genomes_project 13 61586390 61600143 - MGP_NODShiLtJ_P0037022 Slc28a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037023.1 MGP_NODShiLtJ_G0020475.1 mouse_genomes_project 13 61595180 61663427 - MGP_NODShiLtJ_P0037023 Slc28a3 protein_coding protein_coding MGP_NODShiLtJ_T0037024.1 MGP_NODShiLtJ_G0020475.1 mouse_genomes_project 13 61624927 61663427 - MGP_NODShiLtJ_P0037024 Slc28a3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037025.1 MGP_NODShiLtJ_G0020475.1 mouse_genomes_project 13 61637525 61663419 - Slc28a3 protein_coding retained_intron MGP_NODShiLtJ_T0035924.1 MGP_NODShiLtJ_G0020043.1 mouse_genomes_project 13 212873 238268 + MGP_NODShiLtJ_P0035924 Asb13 protein_coding protein_coding MGP_NODShiLtJ_T0035925.1 MGP_NODShiLtJ_G0020043.1 mouse_genomes_project 13 212930 213624 + Asb13 protein_coding processed_transcript MGP_NODShiLtJ_T0035926.1 MGP_NODShiLtJ_G0020043.1 mouse_genomes_project 13 212939 236983 + Asb13 protein_coding processed_transcript MGP_NODShiLtJ_T0035927.1 MGP_NODShiLtJ_G0020043.1 mouse_genomes_project 13 212940 222835 + Asb13 protein_coding retained_intron MGP_NODShiLtJ_T0037211.1 MGP_NODShiLtJ_G0020548.1 mouse_genomes_project 13 71184836 71252341 - MGP_NODShiLtJ_P0037211 protein_coding protein_coding MGP_NODShiLtJ_T0003449.1 MGP_NODShiLtJ_G0003141.1 mouse_genomes_project 13 112383633 112385293 + 1700099I09Rik antisense antisense MGP_NODShiLtJ_T0003450.1 MGP_NODShiLtJ_G0003141.1 mouse_genomes_project 13 112383648 112385259 + 1700099I09Rik antisense antisense MGP_NODShiLtJ_T0037352.1 MGP_NODShiLtJ_G0020615.1 mouse_genomes_project 13 80574040 80576221 - MGP_NODShiLtJ_P0037352 Gpr150 protein_coding protein_coding MGP_NODShiLtJ_T0036405.1 MGP_NODShiLtJ_G0020263.1 mouse_genomes_project 13 31874615 31877268 + MGP_NODShiLtJ_P0036405 Foxq1 protein_coding protein_coding MGP_NODShiLtJ_T0100083.1 MGP_NODShiLtJ_G0038477.1 mouse_genomes_project 13 117301308 117301374 - Gm24431 snoRNA snoRNA MGP_NODShiLtJ_T0037406.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89596612 89787556 + MGP_NODShiLtJ_P0037406 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037407.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89596784 89787902 + MGP_NODShiLtJ_P0037407 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037408.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89596818 89709951 + MGP_NODShiLtJ_P0037408 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037409.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89596818 89710017 + MGP_NODShiLtJ_P0037409 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037410.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89596818 89791295 + MGP_NODShiLtJ_P0037410 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037411.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89596818 89791295 + MGP_NODShiLtJ_P0037411 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037412.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89630529 89746531 + MGP_NODShiLtJ_P0037412 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037413.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89631747 89755369 + MGP_NODShiLtJ_P0037413 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037414.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89632238 89791297 + MGP_NODShiLtJ_P0037414 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037415.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89632253 89636999 + Mef2c protein_coding retained_intron MGP_NODShiLtJ_T0037416.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89632310 89788675 + MGP_NODShiLtJ_P0037416 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037417.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89632311 89746673 + MGP_NODShiLtJ_P0037417 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037418.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89632317 89787909 + MGP_NODShiLtJ_P0037418 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037419.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89632347 89777157 + MGP_NODShiLtJ_P0037419 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037420.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89632376 89756119 + Mef2c protein_coding retained_intron MGP_NODShiLtJ_T0037421.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89637787 89746522 + MGP_NODShiLtJ_P0037421 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037422.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89687228 89758862 + MGP_NODShiLtJ_P0037422 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037423.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89687261 89746710 + MGP_NODShiLtJ_P0037423 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037424.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89688487 89791297 + MGP_NODShiLtJ_P0037424 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037425.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89688498 89693292 + Mef2c protein_coding retained_intron MGP_NODShiLtJ_T0037426.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89688502 89788689 + MGP_NODShiLtJ_P0037426 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037427.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89688505 89755470 + MGP_NODShiLtJ_P0037427 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037428.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89690025 89777110 + MGP_NODShiLtJ_P0037428 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037429.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89690090 89755395 + MGP_NODShiLtJ_P0037429 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037430.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89690557 89786844 + MGP_NODShiLtJ_P0037430 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037431.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89690557 89786844 + MGP_NODShiLtJ_P0037431 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037432.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89746740 89786949 + MGP_NODShiLtJ_P0037432 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0037433.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89755294 89779774 + MGP_NODShiLtJ_P0037433 Mef2c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037434.1 MGP_NODShiLtJ_G0020630.1 mouse_genomes_project 13 89777134 89786952 + MGP_NODShiLtJ_P0037434 Mef2c protein_coding protein_coding MGP_NODShiLtJ_T0012752.1 MGP_NODShiLtJ_G0010860.1 mouse_genomes_project 13 6608762 6608913 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037788.1 MGP_NODShiLtJ_G0020740.1 mouse_genomes_project 13 113838281 113878898 - MGP_NODShiLtJ_P0037788 Trappc13 protein_coding protein_coding MGP_NODShiLtJ_T0037789.1 MGP_NODShiLtJ_G0020740.1 mouse_genomes_project 13 113838288 113878854 - MGP_NODShiLtJ_P0037789 Trappc13 protein_coding protein_coding MGP_NODShiLtJ_T0037790.1 MGP_NODShiLtJ_G0020740.1 mouse_genomes_project 13 113839354 113878852 - MGP_NODShiLtJ_P0037790 Trappc13 protein_coding protein_coding MGP_NODShiLtJ_T0037791.1 MGP_NODShiLtJ_G0020740.1 mouse_genomes_project 13 113839991 113878836 - MGP_NODShiLtJ_P0037791 Trappc13 protein_coding protein_coding MGP_NODShiLtJ_T0037792.1 MGP_NODShiLtJ_G0020740.1 mouse_genomes_project 13 113864093 113878888 - Trappc13 protein_coding retained_intron MGP_NODShiLtJ_T0037793.1 MGP_NODShiLtJ_G0020740.1 mouse_genomes_project 13 113873221 113878868 - Trappc13 protein_coding processed_transcript MGP_NODShiLtJ_T0037005.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61423011 61434727 - MGP_NODShiLtJ_P0037005 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037006.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61423108 61433886 - MGP_NODShiLtJ_P0037006 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037007.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61423108 61429592 - MGP_NODShiLtJ_P0037007 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037008.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61423108 61433848 - MGP_NODShiLtJ_P0037008 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037009.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61423206 61434033 - MGP_NODShiLtJ_P0037009 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037010.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61425884 61433526 - MGP_NODShiLtJ_P0037010 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037011.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61426076 61427257 - Hnrnpk protein_coding retained_intron MGP_NODShiLtJ_T0037012.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61426139 61428602 - Hnrnpk protein_coding retained_intron MGP_NODShiLtJ_T0037013.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61426197 61433487 - MGP_NODShiLtJ_P0037013 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037014.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61426226 61428483 - Hnrnpk protein_coding retained_intron MGP_NODShiLtJ_T0037015.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61426701 61433871 - MGP_NODShiLtJ_P0037015 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037016.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61426731 61433891 - MGP_NODShiLtJ_P0037016 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037017.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61426801 61429554 - Hnrnpk protein_coding retained_intron MGP_NODShiLtJ_T0037018.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61426806 61429554 - MGP_NODShiLtJ_P0037018 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0037019.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61427425 61433494 - Hnrnpk protein_coding retained_intron MGP_NODShiLtJ_T0037020.1 MGP_NODShiLtJ_G0020473.1 mouse_genomes_project 13 61428573 61433500 - MGP_NODShiLtJ_P0037020 Hnrnpk protein_coding protein_coding MGP_NODShiLtJ_T0000857.1 MGP_NODShiLtJ_G0000786.1 mouse_genomes_project 13 40561569 40561932 + TEC TEC MGP_NODShiLtJ_T0036352.1 MGP_NODShiLtJ_G0020233.1 mouse_genomes_project 13 26874384 26885256 + MGP_NODShiLtJ_P0036352 protein_coding protein_coding MGP_NODShiLtJ_T0037599.1 MGP_NODShiLtJ_G0020681.1 mouse_genomes_project 13 104462495 104744015 - MGP_NODShiLtJ_P0037599 Iqgap2 protein_coding protein_coding MGP_NODShiLtJ_T0037204.1 MGP_NODShiLtJ_G0020543.1 mouse_genomes_project 13 71070490 71086927 - MGP_NODShiLtJ_P0037204 Zfp458 protein_coding protein_coding MGP_NODShiLtJ_T0101618.1 MGP_NODShiLtJ_G0039787.1 mouse_genomes_project 13 22197174 22197411 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003388.1 MGP_NODShiLtJ_G0003106.1 mouse_genomes_project 13 24343973 24352473 + 4932702P03Rik antisense antisense MGP_NODShiLtJ_T0003389.1 MGP_NODShiLtJ_G0003106.1 mouse_genomes_project 13 24343976 24345610 + 4932702P03Rik antisense antisense MGP_NODShiLtJ_T0036695.1 MGP_NODShiLtJ_G0020376.1 mouse_genomes_project 13 51666172 51881422 - MGP_NODShiLtJ_P0036695 Cenpp protein_coding protein_coding MGP_NODShiLtJ_T0037515.1 MGP_NODShiLtJ_G0020650.1 mouse_genomes_project 13 100794809 100796249 + MGP_NODShiLtJ_P0037515 Gm20379 protein_coding protein_coding MGP_NODShiLtJ_T0009819.1 MGP_NODShiLtJ_G0007952.1 mouse_genomes_project 13 2809159 2809250 - Gm26043 miRNA miRNA MGP_NODShiLtJ_T0098272.1 MGP_NODShiLtJ_G0036680.1 mouse_genomes_project 13 66904920 66908484 - Gm16132 sense_intronic sense_intronic MGP_NODShiLtJ_T0036274.1 MGP_NODShiLtJ_G0020210.1 mouse_genomes_project 13 23157981 23166947 + MGP_NODShiLtJ_P0036274 Trim38 protein_coding protein_coding MGP_NODShiLtJ_T0037928.1 MGP_NODShiLtJ_G0020788.1 mouse_genomes_project 13 124532716 124559096 - MGP_NODShiLtJ_P0037928 Snx18 protein_coding protein_coding MGP_NODShiLtJ_T0036124.1 MGP_NODShiLtJ_G0020109.1 mouse_genomes_project 13 18481564 18493812 + MGP_NODShiLtJ_P0036124 Sfrp4 protein_coding protein_coding MGP_NODShiLtJ_T0036210.1 MGP_NODShiLtJ_G0020156.1 mouse_genomes_project 13 21105910 21106310 - MGP_NODShiLtJ_P0036210 Hist1h4n protein_coding protein_coding MGP_NODShiLtJ_T0036088.1 MGP_NODShiLtJ_G0020095.1 mouse_genomes_project 13 12772385 12780515 + MGP_NODShiLtJ_P0036088 AW209491 protein_coding protein_coding MGP_NODShiLtJ_T0036089.1 MGP_NODShiLtJ_G0020095.1 mouse_genomes_project 13 12772398 12780515 + MGP_NODShiLtJ_P0036089 AW209491 protein_coding protein_coding MGP_NODShiLtJ_T0006486.1 MGP_NODShiLtJ_G0005374.1 mouse_genomes_project 13 35871854 35891069 + Gm16984 lincRNA lincRNA MGP_NODShiLtJ_T0006487.1 MGP_NODShiLtJ_G0005374.1 mouse_genomes_project 13 35871907 35905452 + Gm16984 lincRNA lincRNA MGP_NODShiLtJ_T0006537.1 MGP_NODShiLtJ_G0005409.1 mouse_genomes_project 13 76775528 76776353 - Gm20554 lincRNA lincRNA MGP_NODShiLtJ_T0036172.1 MGP_NODShiLtJ_G0020132.1 mouse_genomes_project 13 20529288 20530275 - MGP_NODShiLtJ_P0036172 protein_coding protein_coding MGP_NODShiLtJ_T0036476.1 MGP_NODShiLtJ_G0020294.1 mouse_genomes_project 13 35762373 35789675 + MGP_NODShiLtJ_P0036476 Prpf4b protein_coding protein_coding MGP_NODShiLtJ_T0036475.1 MGP_NODShiLtJ_G0020293.1 mouse_genomes_project 13 35608041 35620724 + MGP_NODShiLtJ_P0036475 Fam50b protein_coding protein_coding MGP_NODShiLtJ_T0037929.1 MGP_NODShiLtJ_G0020789.1 mouse_genomes_project 13 124610305 124611086 - MGP_NODShiLtJ_P0037929 Hspb3 protein_coding protein_coding MGP_NODShiLtJ_T0037660.1 MGP_NODShiLtJ_G0020702.1 mouse_genomes_project 13 107440557 107447629 - MGP_NODShiLtJ_P0037660 Btf3 protein_coding protein_coding MGP_NODShiLtJ_T0037661.1 MGP_NODShiLtJ_G0020702.1 mouse_genomes_project 13 107440558 107447668 - MGP_NODShiLtJ_P0037661 Btf3 protein_coding protein_coding MGP_NODShiLtJ_T0037662.1 MGP_NODShiLtJ_G0020702.1 mouse_genomes_project 13 107440559 107442177 - Btf3 protein_coding retained_intron MGP_NODShiLtJ_T0037663.1 MGP_NODShiLtJ_G0020702.1 mouse_genomes_project 13 107440603 107447038 - MGP_NODShiLtJ_P0037663 Btf3 protein_coding protein_coding MGP_NODShiLtJ_T0037664.1 MGP_NODShiLtJ_G0020702.1 mouse_genomes_project 13 107443700 107447658 - Btf3 protein_coding retained_intron MGP_NODShiLtJ_T0012826.1 MGP_NODShiLtJ_G0010934.1 mouse_genomes_project 13 85352317 85353482 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037552.1 MGP_NODShiLtJ_G0020663.1 mouse_genomes_project 13 102264751 102284181 - MGP_NODShiLtJ_P0037552 Bhmt protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037553.1 MGP_NODShiLtJ_G0020663.1 mouse_genomes_project 13 102265294 102284251 - Bhmt protein_coding retained_intron MGP_NODShiLtJ_T0012838.1 MGP_NODShiLtJ_G0010946.1 mouse_genomes_project 13 113049619 113050041 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012844.1 MGP_NODShiLtJ_G0010952.1 mouse_genomes_project 13 123752967 123753924 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098819.1 MGP_NODShiLtJ_G0037213.1 mouse_genomes_project 13 102637780 102637880 + Gm24737 snRNA snRNA MGP_NODShiLtJ_T0036039.1 MGP_NODShiLtJ_G0020077.1 mouse_genomes_project 13 9987251 10060942 - MGP_NODShiLtJ_P0036039 Actn2 protein_coding protein_coding MGP_NODShiLtJ_T0036040.1 MGP_NODShiLtJ_G0020077.1 mouse_genomes_project 13 9987260 10060906 - MGP_NODShiLtJ_P0036040 Actn2 protein_coding protein_coding MGP_NODShiLtJ_T0036041.1 MGP_NODShiLtJ_G0020077.1 mouse_genomes_project 13 10025529 10060914 - MGP_NODShiLtJ_P0036041 Actn2 protein_coding protein_coding MGP_NODShiLtJ_T0037945.1 MGP_NODShiLtJ_G0020796.1 mouse_genomes_project 13 126180579 126182844 - MGP_NODShiLtJ_P0037945 Pelo protein_coding protein_coding MGP_NODShiLtJ_T0037872.1 MGP_NODShiLtJ_G0020763.1 mouse_genomes_project 13 120667255 120912710 - MGP_NODShiLtJ_P0037872 Rab3c protein_coding protein_coding MGP_NODShiLtJ_T0098803.1 MGP_NODShiLtJ_G0037197.1 mouse_genomes_project 13 33224011 33224120 + Gm27342 snRNA snRNA MGP_NODShiLtJ_T0036363.1 MGP_NODShiLtJ_G0020242.1 mouse_genomes_project 13 27286823 27292809 - MGP_NODShiLtJ_P0036363 Prl8a6 protein_coding protein_coding MGP_NODShiLtJ_T0036364.1 MGP_NODShiLtJ_G0020242.1 mouse_genomes_project 13 27286836 27292758 - MGP_NODShiLtJ_P0036364 Prl8a6 protein_coding protein_coding MGP_NODShiLtJ_T0006524.1 MGP_NODShiLtJ_G0005399.1 mouse_genomes_project 13 58649679 58650415 - Gm28760 lincRNA lincRNA MGP_NODShiLtJ_T0006525.1 MGP_NODShiLtJ_G0005399.1 mouse_genomes_project 13 58649679 58650412 - Gm28760 lincRNA lincRNA MGP_NODShiLtJ_T0036194.1 MGP_NODShiLtJ_G0020150.1 mouse_genomes_project 13 20857971 20863341 - MGP_NODShiLtJ_P0036194 protein_coding protein_coding MGP_NODShiLtJ_T0036196.1 MGP_NODShiLtJ_G0020150.1 mouse_genomes_project 13 20858171 20863341 - MGP_NODShiLtJ_P0036196 protein_coding protein_coding MGP_NODShiLtJ_T0037834.1 MGP_NODShiLtJ_G0020758.1 mouse_genomes_project 13 118445121 118562149 - MGP_NODShiLtJ_P0037834 Ndufaf2 protein_coding protein_coding MGP_NODShiLtJ_T0037681.1 MGP_NODShiLtJ_G0020712.1 mouse_genomes_project 13 108581877 108656948 + MGP_NODShiLtJ_P0037681 Mrps27 protein_coding protein_coding MGP_NODShiLtJ_T0037682.1 MGP_NODShiLtJ_G0020712.1 mouse_genomes_project 13 108581894 108656957 + MGP_NODShiLtJ_P0037682 Mrps27 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0002450.1 MGP_NODShiLtJ_G0002357.1 mouse_genomes_project 13 18061899 18061959 + MGP_NODShiLtJ_P0002450 Trgj1 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0012771.1 MGP_NODShiLtJ_G0010879.1 mouse_genomes_project 13 22548420 22550230 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101617.1 MGP_NODShiLtJ_G0039786.1 mouse_genomes_project 13 22043855 22044757 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037753.1 MGP_NODShiLtJ_G0020734.1 mouse_genomes_project 13 112312534 112326639 + MGP_NODShiLtJ_P0037753 Cd180 protein_coding protein_coding MGP_NODShiLtJ_T0037754.1 MGP_NODShiLtJ_G0020734.1 mouse_genomes_project 13 112312541 112323997 + MGP_NODShiLtJ_P0037754 Cd180 protein_coding protein_coding MGP_NODShiLtJ_T0037755.1 MGP_NODShiLtJ_G0020734.1 mouse_genomes_project 13 112312549 112324802 + MGP_NODShiLtJ_P0037755 Cd180 protein_coding protein_coding MGP_NODShiLtJ_T0037756.1 MGP_NODShiLtJ_G0020734.1 mouse_genomes_project 13 112312555 112361908 + MGP_NODShiLtJ_P0037756 Cd180 protein_coding protein_coding MGP_NODShiLtJ_T0037757.1 MGP_NODShiLtJ_G0020734.1 mouse_genomes_project 13 112312587 112361783 + MGP_NODShiLtJ_P0037757 Cd180 protein_coding protein_coding MGP_NODShiLtJ_T0100074.1 MGP_NODShiLtJ_G0038468.1 mouse_genomes_project 13 84141591 84141735 + Gm25383 snoRNA snoRNA MGP_NODShiLtJ_T0036013.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7164360 7248905 - MGP_NODShiLtJ_P0036013 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036014.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7164360 7249533 - MGP_NODShiLtJ_P0036014 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036015.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7164360 7248905 - MGP_NODShiLtJ_P0036015 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036016.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7164362 7249379 - MGP_NODShiLtJ_P0036016 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036017.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7164365 7170810 - Zmynd11 protein_coding retained_intron MGP_NODShiLtJ_T0036018.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7164365 7248905 - MGP_NODShiLtJ_P0036018 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036019.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7164619 7249175 - MGP_NODShiLtJ_P0036019 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036020.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7166389 7201560 - MGP_NODShiLtJ_P0036020 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036021.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7168675 7170047 - Zmynd11 protein_coding retained_intron MGP_NODShiLtJ_T0036022.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7173018 7175681 - Zmynd11 protein_coding retained_intron MGP_NODShiLtJ_T0036023.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7173829 7249489 - MGP_NODShiLtJ_P0036023 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036024.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7174674 7248905 - MGP_NODShiLtJ_P0036024 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036025.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7177146 7249540 - MGP_NODShiLtJ_P0036025 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036026.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7177146 7249156 - MGP_NODShiLtJ_P0036026 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036027.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7177165 7220119 - Zmynd11 protein_coding processed_transcript MGP_NODShiLtJ_T0036028.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7177202 7219761 - Zmynd11 protein_coding processed_transcript MGP_NODShiLtJ_T0036029.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7177205 7248905 - MGP_NODShiLtJ_P0036029 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036030.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7178163 7220227 - MGP_NODShiLtJ_P0036030 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0036031.1 MGP_NODShiLtJ_G0020073.1 mouse_genomes_project 13 7188974 7248905 - MGP_NODShiLtJ_P0036031 Zmynd11 protein_coding protein_coding MGP_NODShiLtJ_T0006556.1 MGP_NODShiLtJ_G0005422.1 mouse_genomes_project 13 105007899 105008866 + Gm29543 lincRNA lincRNA MGP_NODShiLtJ_T0101637.1 MGP_NODShiLtJ_G0039806.1 mouse_genomes_project 13 34434612 34434771 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037526.1 MGP_NODShiLtJ_G0020653.1 mouse_genomes_project 13 100947687 100982370 - MGP_NODShiLtJ_P0037526 Fam151b protein_coding protein_coding MGP_NODShiLtJ_T0036309.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 23988713 24149511 + MGP_NODShiLtJ_P0036309 Fam65b protein_coding protein_coding MGP_NODShiLtJ_T0036310.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24023693 24118763 + Fam65b protein_coding retained_intron MGP_NODShiLtJ_T0036311.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24023693 24122587 + MGP_NODShiLtJ_P0036311 Fam65b protein_coding protein_coding MGP_NODShiLtJ_T0036312.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24023710 24122483 + MGP_NODShiLtJ_P0036312 Fam65b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036313.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24047744 24149502 + MGP_NODShiLtJ_P0036313 Fam65b protein_coding protein_coding MGP_NODShiLtJ_T0036314.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24047746 24087883 + Fam65b protein_coding retained_intron MGP_NODShiLtJ_T0036315.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24047780 24114141 + MGP_NODShiLtJ_P0036315 Fam65b protein_coding protein_coding MGP_NODShiLtJ_T0036316.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24047792 24122587 + MGP_NODShiLtJ_P0036316 Fam65b protein_coding protein_coding MGP_NODShiLtJ_T0036317.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24047809 24112365 + Fam65b protein_coding retained_intron MGP_NODShiLtJ_T0036318.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24088811 24093887 + Fam65b protein_coding retained_intron MGP_NODShiLtJ_T0036319.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24091339 24093883 + Fam65b protein_coding retained_intron MGP_NODShiLtJ_T0036320.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24104375 24110634 + Fam65b protein_coding retained_intron MGP_NODShiLtJ_T0036321.1 MGP_NODShiLtJ_G0020220.1 mouse_genomes_project 13 24126666 24132286 + Fam65b protein_coding retained_intron MGP_NODShiLtJ_T0036523.1 MGP_NODShiLtJ_G0020314.1 mouse_genomes_project 13 39746131 39775518 - MGP_NODShiLtJ_P0036523 Txndc5 protein_coding protein_coding MGP_NODShiLtJ_T0036524.1 MGP_NODShiLtJ_G0020314.1 mouse_genomes_project 13 39746213 39775024 - MGP_NODShiLtJ_P0036524 Txndc5 protein_coding protein_coding MGP_NODShiLtJ_T0036525.1 MGP_NODShiLtJ_G0020314.1 mouse_genomes_project 13 39746217 39751883 - Txndc5 protein_coding retained_intron MGP_NODShiLtJ_T0036238.1 MGP_NODShiLtJ_G0020184.1 mouse_genomes_project 13 22407730 22411147 + MGP_NODShiLtJ_P0036238 Vmn1r219 protein_coding protein_coding MGP_NODShiLtJ_T0006577.1 MGP_NODShiLtJ_G0005438.1 mouse_genomes_project 13 122623606 122625893 - Gm15325 lincRNA lincRNA MGP_NODShiLtJ_T0009862.1 MGP_NODShiLtJ_G0007995.1 mouse_genomes_project 13 80866491 80866567 - Gm24025 miRNA miRNA MGP_NODShiLtJ_T0037321.1 MGP_NODShiLtJ_G0020601.1 mouse_genomes_project 13 78562981 78577171 - MGP_NODShiLtJ_P0037321 Pdcd6 protein_coding protein_coding MGP_NODShiLtJ_T0097930.1 MGP_NODShiLtJ_G0036342.1 mouse_genomes_project 13 55486781 55486893 - n-R5s54 rRNA rRNA MGP_NODShiLtJ_T0012784.1 MGP_NODShiLtJ_G0010892.1 mouse_genomes_project 13 26522355 26522777 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037170.1 MGP_NODShiLtJ_G0020529.1 mouse_genomes_project 13 68924967 68926255 + MGP_NODShiLtJ_P0037170 Gm10775 protein_coding protein_coding MGP_NODShiLtJ_T0036951.1 MGP_NODShiLtJ_G0020451.1 mouse_genomes_project 13 58595011 58620680 + MGP_NODShiLtJ_P0036951 Catsper3 protein_coding protein_coding MGP_NODShiLtJ_T0036952.1 MGP_NODShiLtJ_G0020451.1 mouse_genomes_project 13 58595022 58620711 + MGP_NODShiLtJ_P0036952 Catsper3 protein_coding protein_coding MGP_NODShiLtJ_T0036135.1 MGP_NODShiLtJ_G0020115.1 mouse_genomes_project 13 20019895 20020846 - MGP_NODShiLtJ_P0036135 Olfr1370 protein_coding protein_coding MGP_NODShiLtJ_T0097926.1 MGP_NODShiLtJ_G0036338.1 mouse_genomes_project 13 229583 229697 + Gm23084 rRNA rRNA MGP_NODShiLtJ_T0037758.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112354760 112583757 - MGP_NODShiLtJ_P0037758 Mast4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037759.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112354766 112984204 - MGP_NODShiLtJ_P0037759 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037760.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112354771 112984472 - MGP_NODShiLtJ_P0037760 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037761.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112357085 112736911 - MGP_NODShiLtJ_P0037761 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037762.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112357305 112529598 - MGP_NODShiLtJ_P0037762 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037763.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112357305 112584543 - MGP_NODShiLtJ_P0037763 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037764.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112364244 112529278 - MGP_NODShiLtJ_P0037764 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037765.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112377505 112584424 - MGP_NODShiLtJ_P0037765 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037766.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112391157 112395413 - Mast4 protein_coding retained_intron MGP_NODShiLtJ_T0037767.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112402030 112406261 - Mast4 protein_coding retained_intron MGP_NODShiLtJ_T0037768.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112419416 112736894 - MGP_NODShiLtJ_P0037768 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037769.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112422201 112426210 - Mast4 protein_coding retained_intron MGP_NODShiLtJ_T0037770.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112471859 112984472 - MGP_NODShiLtJ_P0037770 Mast4 protein_coding protein_coding MGP_NODShiLtJ_T0037771.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112473015 112529567 - Mast4 protein_coding retained_intron MGP_NODShiLtJ_T0037772.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112654788 112984474 - Mast4 protein_coding retained_intron MGP_NODShiLtJ_T0037773.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112692199 112984509 - Mast4 protein_coding processed_transcript MGP_NODShiLtJ_T0037774.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112703518 112984463 - Mast4 protein_coding processed_transcript MGP_NODShiLtJ_T0037775.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112734242 112736910 - Mast4 protein_coding retained_intron MGP_NODShiLtJ_T0037776.1 MGP_NODShiLtJ_G0020735.1 mouse_genomes_project 13 112982983 112984504 - Mast4 protein_coding retained_intron MGP_NODShiLtJ_T0006466.1 MGP_NODShiLtJ_G0005361.1 mouse_genomes_project 13 29153266 29154538 + A330102I10Rik lincRNA lincRNA MGP_NODShiLtJ_T0006467.1 MGP_NODShiLtJ_G0005361.1 mouse_genomes_project 13 29153339 29168291 + A330102I10Rik lincRNA lincRNA MGP_NODShiLtJ_T0006468.1 MGP_NODShiLtJ_G0005361.1 mouse_genomes_project 13 29155165 29168359 + A330102I10Rik lincRNA lincRNA MGP_NODShiLtJ_T0006469.1 MGP_NODShiLtJ_G0005361.1 mouse_genomes_project 13 29155580 29181857 + A330102I10Rik lincRNA lincRNA MGP_NODShiLtJ_T0037461.1 MGP_NODShiLtJ_G0020636.1 mouse_genomes_project 13 97558685 97653221 + MGP_NODShiLtJ_P0037461 Hapln1 protein_coding protein_coding MGP_NODShiLtJ_T0037532.1 MGP_NODShiLtJ_G0020656.1 mouse_genomes_project 13 101127242 101233236 + MGP_NODShiLtJ_P0037532 Serinc5 protein_coding protein_coding MGP_NODShiLtJ_T0036522.1 MGP_NODShiLtJ_G0020313.1 mouse_genomes_project 13 39584166 39745669 + MGP_NODShiLtJ_P0036522 Bmp6 protein_coding protein_coding MGP_NODShiLtJ_T0037731.1 MGP_NODShiLtJ_G0020727.1 mouse_genomes_project 13 110067788 110096422 + MGP_NODShiLtJ_P0037731 Ccdc125 protein_coding protein_coding MGP_NODShiLtJ_T0036691.1 MGP_NODShiLtJ_G0020374.1 mouse_genomes_project 13 51529082 51576704 + MGP_NODShiLtJ_P0036691 Bicd2 protein_coding protein_coding MGP_NODShiLtJ_T0036692.1 MGP_NODShiLtJ_G0020374.1 mouse_genomes_project 13 51529082 51576704 + MGP_NODShiLtJ_P0036692 Bicd2 protein_coding protein_coding MGP_NODShiLtJ_T0036693.1 MGP_NODShiLtJ_G0020374.1 mouse_genomes_project 13 51529082 51576704 + MGP_NODShiLtJ_P0036693 Bicd2 protein_coding protein_coding MGP_NODShiLtJ_T0036224.1 MGP_NODShiLtJ_G0020170.1 mouse_genomes_project 13 21580351 21581254 + MGP_NODShiLtJ_P0036224 Vmn1r201 protein_coding protein_coding MGP_NODShiLtJ_T0098798.1 MGP_NODShiLtJ_G0037192.1 mouse_genomes_project 13 23022036 23022140 + Gm22452 snRNA snRNA MGP_NODShiLtJ_T0097929.1 MGP_NODShiLtJ_G0036341.1 mouse_genomes_project 13 48448251 48448329 + Gm24915 rRNA rRNA MGP_NODShiLtJ_T0036350.1 MGP_NODShiLtJ_G0020231.1 mouse_genomes_project 13 26497939 26499930 - MGP_NODShiLtJ_P0036350 Hdgfl1 protein_coding protein_coding MGP_NODShiLtJ_T0036058.1 MGP_NODShiLtJ_G0020086.1 mouse_genomes_project 13 11771700 11794767 + Gng4 protein_coding processed_transcript MGP_NODShiLtJ_T0036059.1 MGP_NODShiLtJ_G0020086.1 mouse_genomes_project 13 11771970 11817412 + MGP_NODShiLtJ_P0036059 Gng4 protein_coding protein_coding MGP_NODShiLtJ_T0037944.1 MGP_NODShiLtJ_G0020795.1 mouse_genomes_project 13 126038451 126194619 - MGP_NODShiLtJ_P0037944 Itga1 protein_coding protein_coding MGP_NODShiLtJ_T0036365.1 MGP_NODShiLtJ_G0020243.1 mouse_genomes_project 13 27414686 27432625 - MGP_NODShiLtJ_P0036365 Prl8a8 protein_coding protein_coding MGP_NODShiLtJ_T0036366.1 MGP_NODShiLtJ_G0020243.1 mouse_genomes_project 13 27414746 27432623 - MGP_NODShiLtJ_P0036366 Prl8a8 protein_coding protein_coding MGP_NODShiLtJ_T0101610.1 MGP_NODShiLtJ_G0039779.1 mouse_genomes_project 13 21757395 21758489 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017222.1 MGP_NODShiLtJ_G0015121.1 mouse_genomes_project 13 23128259 23131527 - processed_transcript processed_transcript MGP_NODShiLtJ_T0037353.1 MGP_NODShiLtJ_G0020616.1 mouse_genomes_project 13 80579645 80622062 - MGP_NODShiLtJ_P0037353 Arsk protein_coding protein_coding MGP_NODShiLtJ_T0037354.1 MGP_NODShiLtJ_G0020616.1 mouse_genomes_project 13 80592371 80622074 - Arsk protein_coding retained_intron MGP_NODShiLtJ_T0012799.1 MGP_NODShiLtJ_G0010907.1 mouse_genomes_project 13 34844387 34845753 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036752.1 MGP_NODShiLtJ_G0020395.1 mouse_genomes_project 13 54296189 54297979 + MGP_NODShiLtJ_P0036752 Gadd45g protein_coding protein_coding MGP_NODShiLtJ_T0036753.1 MGP_NODShiLtJ_G0020395.1 mouse_genomes_project 13 54296255 54297735 + Gadd45g protein_coding retained_intron MGP_NODShiLtJ_T0012770.1 MGP_NODShiLtJ_G0010878.1 mouse_genomes_project 13 22332959 22333423 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012804.1 MGP_NODShiLtJ_G0010912.1 mouse_genomes_project 13 57157574 57157959 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036591.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46477992 46481319 + Jarid2 protein_coding processed_transcript MGP_NODShiLtJ_T0036592.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46478053 46613516 + MGP_NODShiLtJ_P0036592 Jarid2 protein_coding protein_coding MGP_NODShiLtJ_T0036593.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46478313 46588206 + MGP_NODShiLtJ_P0036593 Jarid2 protein_coding protein_coding MGP_NODShiLtJ_T0036594.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46480471 46689733 + MGP_NODShiLtJ_P0036594 Jarid2 protein_coding protein_coding MGP_NODShiLtJ_T0036595.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46480520 46690620 + MGP_NODShiLtJ_P0036595 Jarid2 protein_coding protein_coding MGP_NODShiLtJ_T0036596.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46480535 46671861 + MGP_NODShiLtJ_P0036596 Jarid2 protein_coding protein_coding MGP_NODShiLtJ_T0036597.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46480556 46640275 + Jarid2 protein_coding processed_transcript MGP_NODShiLtJ_T0036598.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46481015 46691268 + MGP_NODShiLtJ_P0036598 Jarid2 protein_coding protein_coding MGP_NODShiLtJ_T0036599.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46481031 46588099 + MGP_NODShiLtJ_P0036599 Jarid2 protein_coding protein_coding MGP_NODShiLtJ_T0036600.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46481112 46653598 + Jarid2 protein_coding retained_intron MGP_NODShiLtJ_T0036601.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46481114 46691265 + Jarid2 protein_coding retained_intron MGP_NODShiLtJ_T0036602.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46481342 46653318 + MGP_NODShiLtJ_P0036602 Jarid2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036603.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46481603 46640266 + Jarid2 protein_coding processed_transcript MGP_NODShiLtJ_T0036604.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46483846 46640238 + Jarid2 protein_coding processed_transcript MGP_NODShiLtJ_T0036605.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46606331 46683944 + MGP_NODShiLtJ_P0036605 Jarid2 protein_coding protein_coding MGP_NODShiLtJ_T0036606.1 MGP_NODShiLtJ_G0020344.1 mouse_genomes_project 13 46606423 46665084 + MGP_NODShiLtJ_P0036606 Jarid2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037143.1 MGP_NODShiLtJ_G0020512.1 mouse_genomes_project 13 67634146 67667854 - MGP_NODShiLtJ_P0037143 Hsd17b3 protein_coding protein_coding MGP_NODShiLtJ_T0037144.1 MGP_NODShiLtJ_G0020512.1 mouse_genomes_project 13 67634146 67667869 - MGP_NODShiLtJ_P0037144 Hsd17b3 protein_coding protein_coding MGP_NODShiLtJ_T0036197.1 MGP_NODShiLtJ_G0020152.1 mouse_genomes_project 13 20998356 21014613 + MGP_NODShiLtJ_P0036197 Zfp184 protein_coding protein_coding MGP_NODShiLtJ_T0036198.1 MGP_NODShiLtJ_G0020152.1 mouse_genomes_project 13 20998374 21014902 + MGP_NODShiLtJ_P0036198 Zfp184 protein_coding protein_coding MGP_NODShiLtJ_T0036199.1 MGP_NODShiLtJ_G0020152.1 mouse_genomes_project 13 20998374 21014731 + MGP_NODShiLtJ_P0036199 Zfp184 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036200.1 MGP_NODShiLtJ_G0020152.1 mouse_genomes_project 13 20998399 21003592 + MGP_NODShiLtJ_P0036200 Zfp184 protein_coding protein_coding MGP_NODShiLtJ_T0036201.1 MGP_NODShiLtJ_G0020152.1 mouse_genomes_project 13 20999055 21014467 + MGP_NODShiLtJ_P0036201 Zfp184 protein_coding protein_coding MGP_NODShiLtJ_T0036202.1 MGP_NODShiLtJ_G0020152.1 mouse_genomes_project 13 21002656 21012839 + Zfp184 protein_coding retained_intron MGP_NODShiLtJ_T0036428.1 MGP_NODShiLtJ_G0020276.1 mouse_genomes_project 13 33700872 33711934 - MGP_NODShiLtJ_P0036428 Serpinb9c protein_coding protein_coding MGP_NODShiLtJ_T0036429.1 MGP_NODShiLtJ_G0020276.1 mouse_genomes_project 13 33708660 33710687 - MGP_NODShiLtJ_P0036429 Serpinb9c protein_coding protein_coding MGP_NODShiLtJ_T0036338.1 MGP_NODShiLtJ_G0020227.1 mouse_genomes_project 13 24381213 24434460 + MGP_NODShiLtJ_P0036338 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036339.1 MGP_NODShiLtJ_G0020227.1 mouse_genomes_project 13 24398714 24406763 + protein_coding processed_transcript MGP_NODShiLtJ_T0036340.1 MGP_NODShiLtJ_G0020227.1 mouse_genomes_project 13 24423722 24435096 + MGP_NODShiLtJ_P0036340 protein_coding protein_coding MGP_NODShiLtJ_T0101050.1 MGP_NODShiLtJ_G0039419.1 mouse_genomes_project 13 24005362 24014060 - transcribed_processed_pseudogene retained_intron MGP_NODShiLtJ_T0101051.1 MGP_NODShiLtJ_G0039419.1 mouse_genomes_project 13 24006119 24006824 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101052.1 MGP_NODShiLtJ_G0039419.1 mouse_genomes_project 13 24006563 24013553 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101053.1 MGP_NODShiLtJ_G0039419.1 mouse_genomes_project 13 24006661 24013494 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101625.1 MGP_NODShiLtJ_G0039794.1 mouse_genomes_project 13 22534449 22535214 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036493.1 MGP_NODShiLtJ_G0020301.1 mouse_genomes_project 13 36975389 36987199 + Ppp1r3g protein_coding processed_transcript MGP_NODShiLtJ_T0036494.1 MGP_NODShiLtJ_G0020301.1 mouse_genomes_project 13 36986727 36989263 + MGP_NODShiLtJ_P0036494 Ppp1r3g protein_coding protein_coding MGP_NODShiLtJ_T0036253.1 MGP_NODShiLtJ_G0020193.1 mouse_genomes_project 13 22889484 22889869 - MGP_NODShiLtJ_P0036253 Hist1h4f protein_coding protein_coding MGP_NODShiLtJ_T0036010.1 MGP_NODShiLtJ_G0020072.1 mouse_genomes_project 13 6745002 7148617 + MGP_NODShiLtJ_P0036010 Dip2c protein_coding protein_coding MGP_NODShiLtJ_T0036011.1 MGP_NODShiLtJ_G0020072.1 mouse_genomes_project 13 6745407 7145870 + MGP_NODShiLtJ_P0036011 Dip2c protein_coding protein_coding MGP_NODShiLtJ_T0036012.1 MGP_NODShiLtJ_G0020072.1 mouse_genomes_project 13 6745456 7145870 + MGP_NODShiLtJ_P0036012 Dip2c protein_coding protein_coding MGP_NODShiLtJ_T0036195.1 MGP_NODShiLtJ_G0020151.1 mouse_genomes_project 13 20857972 20863706 - MGP_NODShiLtJ_P0036195 protein_coding protein_coding MGP_NODShiLtJ_T0037241.1 MGP_NODShiLtJ_G0020564.1 mouse_genomes_project 13 71795836 71810065 + MGP_NODShiLtJ_P0037241 Zfp273 protein_coding protein_coding MGP_NODShiLtJ_T0037242.1 MGP_NODShiLtJ_G0020564.1 mouse_genomes_project 13 71795908 71797342 + Zfp273 protein_coding retained_intron MGP_NODShiLtJ_T0037243.1 MGP_NODShiLtJ_G0020564.1 mouse_genomes_project 13 71795912 71810062 + MGP_NODShiLtJ_P0037243 Zfp273 protein_coding protein_coding MGP_NODShiLtJ_T0011234.1 MGP_NODShiLtJ_G0009367.1 mouse_genomes_project 13 7100653 7100905 - Gm23496 misc_RNA misc_RNA MGP_NODShiLtJ_T0037593.1 MGP_NODShiLtJ_G0020676.1 mouse_genomes_project 13 104155789 104180459 - MGP_NODShiLtJ_P0037593 Aggf1 protein_coding protein_coding MGP_NODShiLtJ_T0037594.1 MGP_NODShiLtJ_G0020676.1 mouse_genomes_project 13 104158608 104180441 - Aggf1 protein_coding processed_transcript MGP_NODShiLtJ_T0002542.1 MGP_NODShiLtJ_G0002441.1 mouse_genomes_project 13 18160888 18161342 - MGP_NODShiLtJ_P0002542 Tcrg-V3 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002543.1 MGP_NODShiLtJ_G0002441.1 mouse_genomes_project 13 18160888 18161342 - MGP_NODShiLtJ_P0002543 Tcrg-V3 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0098827.1 MGP_NODShiLtJ_G0037221.1 mouse_genomes_project 13 131990495 131990602 + Gm23308 snRNA snRNA MGP_NODShiLtJ_T0012818.1 MGP_NODShiLtJ_G0010926.1 mouse_genomes_project 13 78055639 78056082 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036732.1 MGP_NODShiLtJ_G0020392.1 mouse_genomes_project 13 54072014 54110919 + MGP_NODShiLtJ_P0036732 Secisbp2 protein_coding protein_coding MGP_NODShiLtJ_T0036733.1 MGP_NODShiLtJ_G0020392.1 mouse_genomes_project 13 54072058 54090872 + MGP_NODShiLtJ_P0036733 Secisbp2 protein_coding protein_coding MGP_NODShiLtJ_T0036734.1 MGP_NODShiLtJ_G0020392.1 mouse_genomes_project 13 54072114 54081827 + Secisbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0036735.1 MGP_NODShiLtJ_G0020392.1 mouse_genomes_project 13 54072114 54089961 + Secisbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0036736.1 MGP_NODShiLtJ_G0020392.1 mouse_genomes_project 13 54106607 54109404 + Secisbp2 protein_coding retained_intron MGP_NODShiLtJ_T0036737.1 MGP_NODShiLtJ_G0020392.1 mouse_genomes_project 13 54108647 54110364 + Secisbp2 protein_coding retained_intron MGP_NODShiLtJ_T0036557.1 MGP_NODShiLtJ_G0020330.1 mouse_genomes_project 13 43100247 43135305 + MGP_NODShiLtJ_P0036557 Tmem170b protein_coding protein_coding MGP_NODShiLtJ_T0037955.1 MGP_NODShiLtJ_G0020802.1 mouse_genomes_project 13 130242748 130249969 - MGP_NODShiLtJ_P0037955 Mrps30 protein_coding protein_coding MGP_NODShiLtJ_T0037647.1 MGP_NODShiLtJ_G0020696.1 mouse_genomes_project 13 106159633 106182770 - MGP_NODShiLtJ_P0037647 Hexb protein_coding protein_coding MGP_NODShiLtJ_T0036424.1 MGP_NODShiLtJ_G0020273.1 mouse_genomes_project 13 33522531 33537179 + MGP_NODShiLtJ_P0036424 Serpinb9 protein_coding protein_coding MGP_NODShiLtJ_T0036425.1 MGP_NODShiLtJ_G0020273.1 mouse_genomes_project 13 33523824 33537177 + MGP_NODShiLtJ_P0036425 Serpinb9 protein_coding protein_coding MGP_NODShiLtJ_T0037794.1 MGP_NODShiLtJ_G0020741.1 mouse_genomes_project 13 113879225 113927201 + MGP_NODShiLtJ_P0037794 Trim23 protein_coding protein_coding MGP_NODShiLtJ_T0037795.1 MGP_NODShiLtJ_G0020741.1 mouse_genomes_project 13 113879289 113890080 + MGP_NODShiLtJ_P0037795 Trim23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037796.1 MGP_NODShiLtJ_G0020741.1 mouse_genomes_project 13 113879526 113926857 + MGP_NODShiLtJ_P0037796 Trim23 protein_coding protein_coding MGP_NODShiLtJ_T0009872.1 MGP_NODShiLtJ_G0008005.1 mouse_genomes_project 13 119872603 119872684 + Mir582 miRNA miRNA MGP_NODShiLtJ_T0100058.1 MGP_NODShiLtJ_G0038452.1 mouse_genomes_project 13 48950199 48950328 + Gm24769 snoRNA snoRNA MGP_NODShiLtJ_T0100051.1 MGP_NODShiLtJ_G0038445.1 mouse_genomes_project 13 24239729 24239851 - Gm22358 snoRNA snoRNA MGP_NODShiLtJ_T0036774.1 MGP_NODShiLtJ_G0020400.1 mouse_genomes_project 13 55641460 55830809 - MGP_NODShiLtJ_P0036774 Ror2 protein_coding protein_coding MGP_NODShiLtJ_T0036775.1 MGP_NODShiLtJ_G0020400.1 mouse_genomes_project 13 55641465 55831384 - MGP_NODShiLtJ_P0036775 Ror2 protein_coding protein_coding MGP_NODShiLtJ_T0036776.1 MGP_NODShiLtJ_G0020400.1 mouse_genomes_project 13 55665849 55819242 - Ror2 protein_coding processed_transcript MGP_NODShiLtJ_T0037919.1 MGP_NODShiLtJ_G0020783.1 mouse_genomes_project 13 123932070 123936644 - MGP_NODShiLtJ_P0037919 Gpx8 protein_coding protein_coding MGP_NODShiLtJ_T0036426.1 MGP_NODShiLtJ_G0020274.1 mouse_genomes_project 13 33551749 33568026 + MGP_NODShiLtJ_P0036426 Serpinb9b protein_coding protein_coding MGP_NODShiLtJ_T0101628.1 MGP_NODShiLtJ_G0039797.1 mouse_genomes_project 13 23097142 23098699 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036370.1 MGP_NODShiLtJ_G0020246.1 mouse_genomes_project 13 27557492 27569760 - MGP_NODShiLtJ_P0036370 Prl7b1 protein_coding protein_coding MGP_NODShiLtJ_T0100072.1 MGP_NODShiLtJ_G0038466.1 mouse_genomes_project 13 81205706 81205838 - Gm24519 snoRNA snoRNA MGP_NODShiLtJ_T0037343.1 MGP_NODShiLtJ_G0020610.1 mouse_genomes_project 13 80207692 80277831 + MGP_NODShiLtJ_P0037343 Ell2 protein_coding protein_coding MGP_NODShiLtJ_T0098804.1 MGP_NODShiLtJ_G0037198.1 mouse_genomes_project 13 36645421 36645563 + Gm22126 snRNA snRNA MGP_NODShiLtJ_T0097927.1 MGP_NODShiLtJ_G0036339.1 mouse_genomes_project 13 12125165 12125278 - n-R5s52 rRNA rRNA MGP_NODShiLtJ_T0006553.1 MGP_NODShiLtJ_G0005419.1 mouse_genomes_project 13 99781347 99801686 - A830009L08Rik lincRNA lincRNA MGP_NODShiLtJ_T0012820.1 MGP_NODShiLtJ_G0010928.1 mouse_genomes_project 13 78600218 78600557 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100053.1 MGP_NODShiLtJ_G0038447.1 mouse_genomes_project 13 31736427 31736552 + Gm23351 snoRNA snoRNA MGP_NODShiLtJ_T0037806.1 MGP_NODShiLtJ_G0020746.1 mouse_genomes_project 13 114675497 114700392 + MGP_NODShiLtJ_P0037806 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037807.1 MGP_NODShiLtJ_G0020746.1 mouse_genomes_project 13 114685191 114695021 + protein_coding retained_intron MGP_NODShiLtJ_T0003402.1 MGP_NODShiLtJ_G0003117.1 mouse_genomes_project 13 56852682 56856253 - Gm16578 antisense antisense MGP_NODShiLtJ_T0037077.1 MGP_NODShiLtJ_G0020486.1 mouse_genomes_project 13 63333443 63336408 - MGP_NODShiLtJ_P0037077 Gas1 protein_coding protein_coding MGP_NODShiLtJ_T0037277.1 MGP_NODShiLtJ_G0020582.1 mouse_genomes_project 13 77514491 77523132 - MGP_NODShiLtJ_P0037277 Ndufs6 protein_coding protein_coding MGP_NODShiLtJ_T0037278.1 MGP_NODShiLtJ_G0020582.1 mouse_genomes_project 13 77514496 77523042 - MGP_NODShiLtJ_P0037278 Ndufs6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036032.1 MGP_NODShiLtJ_G0020074.1 mouse_genomes_project 13 7352054 7898768 - MGP_NODShiLtJ_P0036032 Chrm3 protein_coding protein_coding MGP_NODShiLtJ_T0036033.1 MGP_NODShiLtJ_G0020074.1 mouse_genomes_project 13 7353805 7355575 - MGP_NODShiLtJ_P0036033 Chrm3 protein_coding protein_coding MGP_NODShiLtJ_T0036034.1 MGP_NODShiLtJ_G0020074.1 mouse_genomes_project 13 7731878 7898484 - Chrm3 protein_coding processed_transcript MGP_NODShiLtJ_T0036467.1 MGP_NODShiLtJ_G0020291.1 mouse_genomes_project 13 35025422 35196019 - MGP_NODShiLtJ_P0036467 Slc22a23 protein_coding protein_coding MGP_NODShiLtJ_T0036468.1 MGP_NODShiLtJ_G0020291.1 mouse_genomes_project 13 35029128 35039793 - Slc22a23 protein_coding retained_intron MGP_NODShiLtJ_T0036469.1 MGP_NODShiLtJ_G0020291.1 mouse_genomes_project 13 35050600 35195817 - MGP_NODShiLtJ_P0036469 Slc22a23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036470.1 MGP_NODShiLtJ_G0020291.1 mouse_genomes_project 13 35067942 35195425 - Slc22a23 protein_coding processed_transcript MGP_NODShiLtJ_T0036795.1 MGP_NODShiLtJ_G0020410.1 mouse_genomes_project 13 57219559 57233675 - 4833439L19Rik protein_coding processed_transcript MGP_NODShiLtJ_T0036796.1 MGP_NODShiLtJ_G0020410.1 mouse_genomes_project 13 57219774 57233690 - MGP_NODShiLtJ_P0036796 4833439L19Rik protein_coding protein_coding MGP_NODShiLtJ_T0036797.1 MGP_NODShiLtJ_G0020410.1 mouse_genomes_project 13 57224397 57233633 - 4833439L19Rik protein_coding retained_intron MGP_NODShiLtJ_T0036798.1 MGP_NODShiLtJ_G0020410.1 mouse_genomes_project 13 57224571 57233680 - 4833439L19Rik protein_coding retained_intron MGP_NODShiLtJ_T0036799.1 MGP_NODShiLtJ_G0020410.1 mouse_genomes_project 13 57224790 57233672 - MGP_NODShiLtJ_P0036799 4833439L19Rik protein_coding protein_coding MGP_NODShiLtJ_T0036800.1 MGP_NODShiLtJ_G0020410.1 mouse_genomes_project 13 57229780 57233686 - 4833439L19Rik protein_coding retained_intron MGP_NODShiLtJ_T0036801.1 MGP_NODShiLtJ_G0020410.1 mouse_genomes_project 13 57229902 57233698 - MGP_NODShiLtJ_P0036801 4833439L19Rik protein_coding protein_coding MGP_NODShiLtJ_T0036802.1 MGP_NODShiLtJ_G0020410.1 mouse_genomes_project 13 57229917 57233667 - MGP_NODShiLtJ_P0036802 4833439L19Rik protein_coding protein_coding MGP_NODShiLtJ_T0036284.1 MGP_NODShiLtJ_G0020213.1 mouse_genomes_project 13 23247512 23254472 + MGP_NODShiLtJ_P0036284 Slc17a1 protein_coding protein_coding MGP_NODShiLtJ_T0036285.1 MGP_NODShiLtJ_G0020213.1 mouse_genomes_project 13 23247766 23276512 + MGP_NODShiLtJ_P0036285 Slc17a1 protein_coding protein_coding MGP_NODShiLtJ_T0036286.1 MGP_NODShiLtJ_G0020213.1 mouse_genomes_project 13 23250053 23256471 + Slc17a1 protein_coding processed_transcript MGP_NODShiLtJ_T0036128.1 MGP_NODShiLtJ_G0020112.1 mouse_genomes_project 13 18639544 18723816 - MGP_NODShiLtJ_P0036128 Gpr141 protein_coding protein_coding MGP_NODShiLtJ_T0100084.1 MGP_NODShiLtJ_G0038478.1 mouse_genomes_project 13 129791522 129791652 + Gm26349 snoRNA snoRNA MGP_NODShiLtJ_T0101642.1 MGP_NODShiLtJ_G0039811.1 mouse_genomes_project 13 34583071 34586565 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036782.1 MGP_NODShiLtJ_G0020405.1 mouse_genomes_project 13 56688835 56728370 + MGP_NODShiLtJ_P0036782 Sfxn1 protein_coding protein_coding MGP_NODShiLtJ_T0003386.1 MGP_NODShiLtJ_G0003104.1 mouse_genomes_project 13 23347127 23356613 + Gm11339 antisense antisense MGP_NODShiLtJ_T0037918.1 MGP_NODShiLtJ_G0020782.1 mouse_genomes_project 13 123928478 123931548 - MGP_NODShiLtJ_P0037918 Gm10735 protein_coding protein_coding MGP_NODShiLtJ_T0097934.1 MGP_NODShiLtJ_G0036346.1 mouse_genomes_project 13 128129917 128130008 + Gm23198 rRNA rRNA MGP_NODShiLtJ_T0036906.1 MGP_NODShiLtJ_G0020436.1 mouse_genomes_project 13 58199649 58208203 - MGP_NODShiLtJ_P0036906 F12 protein_coding protein_coding MGP_NODShiLtJ_T0036907.1 MGP_NODShiLtJ_G0020436.1 mouse_genomes_project 13 58199755 58208189 - MGP_NODShiLtJ_P0036907 F12 protein_coding protein_coding MGP_NODShiLtJ_T0037799.1 MGP_NODShiLtJ_G0020744.1 mouse_genomes_project 13 114062874 114331112 + MGP_NODShiLtJ_P0037799 Adamts6 protein_coding protein_coding MGP_NODShiLtJ_T0037800.1 MGP_NODShiLtJ_G0020744.1 mouse_genomes_project 13 114063068 114260126 + MGP_NODShiLtJ_P0037800 Adamts6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037801.1 MGP_NODShiLtJ_G0020744.1 mouse_genomes_project 13 114272973 114333044 + MGP_NODShiLtJ_P0037801 Adamts6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036149.1 MGP_NODShiLtJ_G0020123.1 mouse_genomes_project 13 20342093 20349090 + MGP_NODShiLtJ_P0036149 Zscan12 protein_coding protein_coding MGP_NODShiLtJ_T0036150.1 MGP_NODShiLtJ_G0020123.1 mouse_genomes_project 13 20342554 20349090 + MGP_NODShiLtJ_P0036150 Zscan12 protein_coding protein_coding MGP_NODShiLtJ_T0036584.1 MGP_NODShiLtJ_G0020338.1 mouse_genomes_project 13 44991935 45027701 + MGP_NODShiLtJ_P0036584 Sirt5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037398.1 MGP_NODShiLtJ_G0020626.1 mouse_genomes_project 13 87242204 87259385 + MGP_NODShiLtJ_P0037398 Lysmd3 protein_coding protein_coding MGP_NODShiLtJ_T0012757.1 MGP_NODShiLtJ_G0010865.1 mouse_genomes_project 13 19632844 19633844 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036661.1 MGP_NODShiLtJ_G0020365.1 mouse_genomes_project 13 50714767 50762455 - MGP_NODShiLtJ_P0036661 Ptpdc1 protein_coding protein_coding MGP_NODShiLtJ_T0006507.1 MGP_NODShiLtJ_G0005389.1 mouse_genomes_project 13 50380297 50381752 - A330048O09Rik lincRNA lincRNA MGP_NODShiLtJ_T0037482.1 MGP_NODShiLtJ_G0020642.1 mouse_genomes_project 13 99247036 99249642 + MGP_NODShiLtJ_P0037482 Rps23 protein_coding protein_coding MGP_NODShiLtJ_T0037483.1 MGP_NODShiLtJ_G0020642.1 mouse_genomes_project 13 99247101 99249650 + MGP_NODShiLtJ_P0037483 Rps23 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006551.1 MGP_NODShiLtJ_G0005417.1 mouse_genomes_project 13 90052189 90090116 + 2810049E08Rik lincRNA lincRNA MGP_NODShiLtJ_T0100049.1 MGP_NODShiLtJ_G0038443.1 mouse_genomes_project 13 22040944 22041075 - Gm23774 snoRNA snoRNA MGP_NODShiLtJ_T0037159.1 MGP_NODShiLtJ_G0020521.1 mouse_genomes_project 13 68361388 68543700 - MGP_NODShiLtJ_P0037159 Cntnap3 protein_coding protein_coding MGP_NODShiLtJ_T0006529.1 MGP_NODShiLtJ_G0005403.1 mouse_genomes_project 13 66803181 66811899 - Gm16907 lincRNA lincRNA MGP_NODShiLtJ_T0003439.1 MGP_NODShiLtJ_G0003136.1 mouse_genomes_project 13 102268901 102272063 + Gm15622 antisense antisense MGP_NODShiLtJ_T0006583.1 MGP_NODShiLtJ_G0005443.1 mouse_genomes_project 13 125658433 125711572 + 4930544M13Rik lincRNA lincRNA MGP_NODShiLtJ_T0006584.1 MGP_NODShiLtJ_G0005443.1 mouse_genomes_project 13 125658433 125756122 + 4930544M13Rik lincRNA lincRNA MGP_NODShiLtJ_T0036225.1 MGP_NODShiLtJ_G0020171.1 mouse_genomes_project 13 21611392 21612301 - MGP_NODShiLtJ_P0036225 Vmn1r202 protein_coding protein_coding MGP_NODShiLtJ_T0037745.1 MGP_NODShiLtJ_G0020732.1 mouse_genomes_project 13 110221086 110257714 - MGP_NODShiLtJ_P0037745 Slc30a5 protein_coding protein_coding MGP_NODShiLtJ_T0037248.1 MGP_NODShiLtJ_G0020569.1 mouse_genomes_project 13 72424227 72440878 + MGP_NODShiLtJ_P0037248 1700001L19Rik protein_coding protein_coding MGP_NODShiLtJ_T0036416.1 MGP_NODShiLtJ_G0020269.1 mouse_genomes_project 13 33272778 33273171 - MGP_NODShiLtJ_P0036416 D930007J09Rik protein_coding protein_coding MGP_NODShiLtJ_T0012831.1 MGP_NODShiLtJ_G0010939.1 mouse_genomes_project 13 97707799 97708400 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011238.1 MGP_NODShiLtJ_G0009371.1 mouse_genomes_project 13 15347055 15347343 - Gm26098 misc_RNA misc_RNA MGP_NODShiLtJ_T0009829.1 MGP_NODShiLtJ_G0007962.1 mouse_genomes_project 13 20947013 20947145 - Mir1983 miRNA miRNA MGP_NODShiLtJ_T0036433.1 MGP_NODShiLtJ_G0020280.1 mouse_genomes_project 13 33780425 33851993 + MGP_NODShiLtJ_P0036433 protein_coding protein_coding MGP_NODShiLtJ_T0036255.1 MGP_NODShiLtJ_G0020195.1 mouse_genomes_project 13 22915070 22916251 + MGP_NODShiLtJ_P0036255 protein_coding protein_coding MGP_NODShiLtJ_T0017244.1 MGP_NODShiLtJ_G0015133.1 mouse_genomes_project 13 122583381 122583942 + processed_transcript processed_transcript MGP_NODShiLtJ_T0036415.1 MGP_NODShiLtJ_G0020268.1 mouse_genomes_project 13 33272359 33294718 + MGP_NODShiLtJ_P0036415 Wrnip1 protein_coding protein_coding MGP_NODShiLtJ_T0037557.1 MGP_NODShiLtJ_G0020666.1 mouse_genomes_project 13 102431557 102621590 + MGP_NODShiLtJ_P0037557 Arsb protein_coding protein_coding MGP_NODShiLtJ_T0009828.1 MGP_NODShiLtJ_G0007961.1 mouse_genomes_project 13 20811263 20811404 + Gm44346 miRNA miRNA MGP_NODShiLtJ_T0006555.1 MGP_NODShiLtJ_G0005421.1 mouse_genomes_project 13 102835617 102838288 - Gm15907 lincRNA lincRNA MGP_NODShiLtJ_T0037692.1 MGP_NODShiLtJ_G0020717.1 mouse_genomes_project 13 109391233 109397394 + MGP_NODShiLtJ_P0037692 Serf1 protein_coding protein_coding MGP_NODShiLtJ_T0037693.1 MGP_NODShiLtJ_G0020717.1 mouse_genomes_project 13 109391306 109394165 + MGP_NODShiLtJ_P0037693 Serf1 protein_coding protein_coding MGP_NODShiLtJ_T0037694.1 MGP_NODShiLtJ_G0020717.1 mouse_genomes_project 13 109391376 109397727 + MGP_NODShiLtJ_P0037694 Serf1 protein_coding protein_coding MGP_NODShiLtJ_T0037695.1 MGP_NODShiLtJ_G0020717.1 mouse_genomes_project 13 109391562 109397394 + MGP_NODShiLtJ_P0037695 Serf1 protein_coding protein_coding MGP_NODShiLtJ_T0037696.1 MGP_NODShiLtJ_G0020717.1 mouse_genomes_project 13 109391617 109397387 + MGP_NODShiLtJ_P0037696 Serf1 protein_coding protein_coding MGP_NODShiLtJ_T0037814.1 MGP_NODShiLtJ_G0020752.1 mouse_genomes_project 13 117070886 117229495 - MGP_NODShiLtJ_P0037814 Ipo11 protein_coding protein_coding MGP_NODShiLtJ_T0037815.1 MGP_NODShiLtJ_G0020752.1 mouse_genomes_project 13 117070886 117217135 - MGP_NODShiLtJ_P0037815 Ipo11 protein_coding protein_coding MGP_NODShiLtJ_T0037816.1 MGP_NODShiLtJ_G0020752.1 mouse_genomes_project 13 117070894 117129927 - MGP_NODShiLtJ_P0037816 Ipo11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037817.1 MGP_NODShiLtJ_G0020752.1 mouse_genomes_project 13 117090365 117143286 - Ipo11 protein_coding retained_intron MGP_NODShiLtJ_T0037818.1 MGP_NODShiLtJ_G0020752.1 mouse_genomes_project 13 117090470 117117879 - Ipo11 protein_coding retained_intron MGP_NODShiLtJ_T0037819.1 MGP_NODShiLtJ_G0020752.1 mouse_genomes_project 13 117115271 117128880 - Ipo11 protein_coding processed_transcript MGP_NODShiLtJ_T0037820.1 MGP_NODShiLtJ_G0020752.1 mouse_genomes_project 13 117115273 117117867 - Ipo11 protein_coding processed_transcript MGP_NODShiLtJ_T0037821.1 MGP_NODShiLtJ_G0020752.1 mouse_genomes_project 13 117146078 117229482 - Ipo11 protein_coding retained_intron MGP_NODShiLtJ_T0003398.1 MGP_NODShiLtJ_G0003113.1 mouse_genomes_project 13 44373240 44379994 - Gm15810 antisense antisense MGP_NODShiLtJ_T0036810.1 MGP_NODShiLtJ_G0020414.1 mouse_genomes_project 13 57262124 57286821 - MGP_NODShiLtJ_P0036810 Cltb protein_coding protein_coding MGP_NODShiLtJ_T0036811.1 MGP_NODShiLtJ_G0020414.1 mouse_genomes_project 13 57263261 57270152 - MGP_NODShiLtJ_P0036811 Cltb protein_coding protein_coding MGP_NODShiLtJ_T0036812.1 MGP_NODShiLtJ_G0020414.1 mouse_genomes_project 13 57263308 57286769 - MGP_NODShiLtJ_P0036812 Cltb protein_coding protein_coding MGP_NODShiLtJ_T0036813.1 MGP_NODShiLtJ_G0020414.1 mouse_genomes_project 13 57267030 57286769 - Cltb protein_coding retained_intron MGP_NODShiLtJ_T0035959.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3648755 3658266 - Pfkp protein_coding retained_intron MGP_NODShiLtJ_T0035960.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3648755 3719621 - MGP_NODShiLtJ_P0035960 Pfkp protein_coding protein_coding MGP_NODShiLtJ_T0035961.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3650266 3719569 - MGP_NODShiLtJ_P0035961 Pfkp protein_coding protein_coding MGP_NODShiLtJ_T0035962.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3650552 3656331 - MGP_NODShiLtJ_P0035962 Pfkp protein_coding protein_coding MGP_NODShiLtJ_T0035963.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3651615 3667207 - MGP_NODShiLtJ_P0035963 Pfkp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035964.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3651615 3668084 - MGP_NODShiLtJ_P0035964 Pfkp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0035965.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3655123 3657926 - Pfkp protein_coding retained_intron MGP_NODShiLtJ_T0035966.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3662289 3719569 - Pfkp protein_coding retained_intron MGP_NODShiLtJ_T0035967.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3667621 3672182 - Pfkp protein_coding retained_intron MGP_NODShiLtJ_T0035968.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3671771 3719569 - Pfkp protein_coding retained_intron MGP_NODShiLtJ_T0035969.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3682863 3690404 - Pfkp protein_coding retained_intron MGP_NODShiLtJ_T0035970.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3687412 3719569 - Pfkp protein_coding retained_intron MGP_NODShiLtJ_T0035971.1 MGP_NODShiLtJ_G0020063.1 mouse_genomes_project 13 3689241 3707468 - MGP_NODShiLtJ_P0035971 Pfkp protein_coding protein_coding MGP_NODShiLtJ_T0012839.1 MGP_NODShiLtJ_G0010947.1 mouse_genomes_project 13 114800544 114800952 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036220.1 MGP_NODShiLtJ_G0020166.1 mouse_genomes_project 13 21396609 21397506 + MGP_NODShiLtJ_P0036220 Vmn1r197 protein_coding protein_coding MGP_NODShiLtJ_T0009874.1 MGP_NODShiLtJ_G0008007.1 mouse_genomes_project 13 123925165 123925274 + Mir449c miRNA miRNA MGP_NODShiLtJ_T0012794.1 MGP_NODShiLtJ_G0010902.1 mouse_genomes_project 13 31300541 31303856 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012845.1 MGP_NODShiLtJ_G0010953.1 mouse_genomes_project 13 124020012 124020271 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012748.1 MGP_NODShiLtJ_G0010856.1 mouse_genomes_project 13 884225 884516 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036270.1 MGP_NODShiLtJ_G0020206.1 mouse_genomes_project 13 23130922 23131319 + MGP_NODShiLtJ_P0036270 Hist1h4b protein_coding protein_coding MGP_NODShiLtJ_T0006579.1 MGP_NODShiLtJ_G0005440.1 mouse_genomes_project 13 122645520 122649516 + Gm15326 lincRNA lincRNA MGP_NODShiLtJ_T0006580.1 MGP_NODShiLtJ_G0005440.1 mouse_genomes_project 13 122648712 122652299 + Gm15326 lincRNA lincRNA MGP_NODShiLtJ_T0037198.1 MGP_NODShiLtJ_G0020539.1 mouse_genomes_project 13 70889856 70907236 - MGP_NODShiLtJ_P0037198 Rslcan18 protein_coding protein_coding MGP_NODShiLtJ_T0037200.1 MGP_NODShiLtJ_G0020539.1 mouse_genomes_project 13 70904224 70909461 - Rslcan18 protein_coding retained_intron MGP_NODShiLtJ_T0009824.1 MGP_NODShiLtJ_G0007957.1 mouse_genomes_project 13 20378654 20378715 - Mir6942 miRNA miRNA MGP_NODShiLtJ_T0037338.1 MGP_NODShiLtJ_G0020607.1 mouse_genomes_project 13 78989895 79044189 + MGP_NODShiLtJ_P0037338 Erap1 protein_coding protein_coding MGP_NODShiLtJ_T0036620.1 MGP_NODShiLtJ_G0020352.1 mouse_genomes_project 13 48337187 48352922 + MGP_NODShiLtJ_P0036620 Rbm24 protein_coding protein_coding MGP_NODShiLtJ_T0009843.1 MGP_NODShiLtJ_G0007976.1 mouse_genomes_project 13 50671741 50671835 - Mirlet7a-1 miRNA miRNA MGP_NODShiLtJ_T0000873.1 MGP_NODShiLtJ_G0000802.1 mouse_genomes_project 13 103356733 103357381 + TEC TEC MGP_NODShiLtJ_T0006569.1 MGP_NODShiLtJ_G0005431.1 mouse_genomes_project 13 108759896 108766071 + Gm26559 lincRNA lincRNA MGP_NODShiLtJ_T0101643.1 MGP_NODShiLtJ_G0039812.1 mouse_genomes_project 13 34619668 34620592 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036234.1 MGP_NODShiLtJ_G0020180.1 mouse_genomes_project 13 22290775 22291678 + MGP_NODShiLtJ_P0036234 Vmn1r215 protein_coding protein_coding MGP_NODShiLtJ_T0000860.1 MGP_NODShiLtJ_G0000789.1 mouse_genomes_project 13 50676206 50678596 - TEC TEC MGP_NODShiLtJ_T0036191.1 MGP_NODShiLtJ_G0020147.1 mouse_genomes_project 13 20811214 20811607 - MGP_NODShiLtJ_P0036191 Hist1h2an protein_coding protein_coding MGP_NODShiLtJ_T0098797.1 MGP_NODShiLtJ_G0037191.1 mouse_genomes_project 13 20474535 20474599 - Gm23779 snRNA snRNA MGP_NODShiLtJ_T0036640.1 MGP_NODShiLtJ_G0020359.1 mouse_genomes_project 13 49016983 49056405 + MGP_NODShiLtJ_P0036640 Kdm1b protein_coding protein_coding MGP_NODShiLtJ_T0036641.1 MGP_NODShiLtJ_G0020359.1 mouse_genomes_project 13 49017025 49027175 + MGP_NODShiLtJ_P0036641 Kdm1b protein_coding protein_coding MGP_NODShiLtJ_T0036642.1 MGP_NODShiLtJ_G0020359.1 mouse_genomes_project 13 49037592 49045730 + Kdm1b protein_coding retained_intron MGP_NODShiLtJ_T0036643.1 MGP_NODShiLtJ_G0020359.1 mouse_genomes_project 13 49039907 49058771 + Kdm1b protein_coding processed_transcript MGP_NODShiLtJ_T0037229.1 MGP_NODShiLtJ_G0020558.1 mouse_genomes_project 13 71651163 71673266 - MGP_NODShiLtJ_P0037229 protein_coding protein_coding MGP_NODShiLtJ_T0037232.1 MGP_NODShiLtJ_G0020558.1 mouse_genomes_project 13 71658680 71673350 - MGP_NODShiLtJ_P0037232 protein_coding protein_coding MGP_NODShiLtJ_T0037233.1 MGP_NODShiLtJ_G0020558.1 mouse_genomes_project 13 71658776 71673313 - MGP_NODShiLtJ_P0037233 protein_coding protein_coding MGP_NODShiLtJ_T0006505.1 MGP_NODShiLtJ_G0005388.1 mouse_genomes_project 13 50135701 50370507 - A330033J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0006506.1 MGP_NODShiLtJ_G0005388.1 mouse_genomes_project 13 50346943 50369965 - A330033J07Rik lincRNA lincRNA MGP_NODShiLtJ_T0037289.1 MGP_NODShiLtJ_G0020588.1 mouse_genomes_project 13 77878135 77895360 - MGP_NODShiLtJ_P0037289 Slc6a18 protein_coding protein_coding MGP_NODShiLtJ_T0037290.1 MGP_NODShiLtJ_G0020588.1 mouse_genomes_project 13 77878135 77895360 - MGP_NODShiLtJ_P0037290 Slc6a18 protein_coding protein_coding MGP_NODShiLtJ_T0037291.1 MGP_NODShiLtJ_G0020588.1 mouse_genomes_project 13 77878135 77895360 - MGP_NODShiLtJ_P0037291 Slc6a18 protein_coding protein_coding MGP_NODShiLtJ_T0036097.1 MGP_NODShiLtJ_G0020099.1 mouse_genomes_project 13 16293186 16296879 + MGP_NODShiLtJ_P0036097 Mplkip protein_coding protein_coding MGP_NODShiLtJ_T0036183.1 MGP_NODShiLtJ_G0020139.1 mouse_genomes_project 13 20696810 20697775 + MGP_NODShiLtJ_P0036183 Olfr1359 protein_coding protein_coding MGP_NODShiLtJ_T0036432.1 MGP_NODShiLtJ_G0020279.1 mouse_genomes_project 13 33773618 33795632 + MGP_NODShiLtJ_P0036432 Serpinb9d protein_coding protein_coding MGP_NODShiLtJ_T0037169.1 MGP_NODShiLtJ_G0020528.1 mouse_genomes_project 13 68833297 68864066 - MGP_NODShiLtJ_P0037169 Nlrp4f protein_coding protein_coding MGP_NODShiLtJ_T0036781.1 MGP_NODShiLtJ_G0020404.1 mouse_genomes_project 13 56667311 56672144 - MGP_NODShiLtJ_P0036781 Drd1 protein_coding protein_coding MGP_NODShiLtJ_T0100042.1 MGP_NODShiLtJ_G0038436.1 mouse_genomes_project 13 6369659 6369794 + Gm25274 snoRNA snoRNA MGP_NODShiLtJ_T0003376.1 MGP_NODShiLtJ_G0003095.1 mouse_genomes_project 13 7897399 8244495 + antisense antisense MGP_NODShiLtJ_T0035945.1 MGP_NODShiLtJ_G0020055.1 mouse_genomes_project 13 1119840 1146522 + MGP_NODShiLtJ_P0035945 Akr1c6 protein_coding protein_coding MGP_NODShiLtJ_T0035946.1 MGP_NODShiLtJ_G0020055.1 mouse_genomes_project 13 1119966 1120581 + Akr1c6 protein_coding processed_transcript MGP_NODShiLtJ_T0035947.1 MGP_NODShiLtJ_G0020055.1 mouse_genomes_project 13 1121680 1135267 + MGP_NODShiLtJ_P0035947 Akr1c6 protein_coding protein_coding MGP_NODShiLtJ_T0036585.1 MGP_NODShiLtJ_G0020339.1 mouse_genomes_project 13 45031152 45035605 + MGP_NODShiLtJ_P0036585 Nol7 protein_coding protein_coding MGP_NODShiLtJ_T0006566.1 MGP_NODShiLtJ_G0005428.1 mouse_genomes_project 13 108295974 108307463 - 2310020H05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006476.1 MGP_NODShiLtJ_G0005368.1 mouse_genomes_project 13 31663225 31682057 - G630018N14Rik lincRNA lincRNA MGP_NODShiLtJ_T0006477.1 MGP_NODShiLtJ_G0005368.1 mouse_genomes_project 13 31675388 31680685 - G630018N14Rik lincRNA lincRNA MGP_NODShiLtJ_T0037069.1 MGP_NODShiLtJ_G0020482.1 mouse_genomes_project 13 62851773 62857601 - MGP_NODShiLtJ_P0037069 Spata31d1d protein_coding protein_coding MGP_NODShiLtJ_T0037101.1 MGP_NODShiLtJ_G0020507.1 mouse_genomes_project 13 66365639 66388854 - MGP_NODShiLtJ_P0037101 Fbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037102.1 MGP_NODShiLtJ_G0020507.1 mouse_genomes_project 13 66365652 66373662 - MGP_NODShiLtJ_P0037102 Fbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037103.1 MGP_NODShiLtJ_G0020507.1 mouse_genomes_project 13 66373622 66388700 - MGP_NODShiLtJ_P0037103 Fbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036290.1 MGP_NODShiLtJ_G0020216.1 mouse_genomes_project 13 23316883 23317273 + MGP_NODShiLtJ_P0036290 Hist1h2aa protein_coding protein_coding MGP_NODShiLtJ_T0036534.1 MGP_NODShiLtJ_G0020320.1 mouse_genomes_project 13 42293226 42410245 + MGP_NODShiLtJ_P0036534 Gcnt2 protein_coding protein_coding MGP_NODShiLtJ_T0036535.1 MGP_NODShiLtJ_G0020320.1 mouse_genomes_project 13 42321767 42410245 + MGP_NODShiLtJ_P0036535 Gcnt2 protein_coding protein_coding MGP_NODShiLtJ_T0036536.1 MGP_NODShiLtJ_G0020320.1 mouse_genomes_project 13 42354480 42410245 + MGP_NODShiLtJ_P0036536 Gcnt2 protein_coding protein_coding MGP_NODShiLtJ_T0100080.1 MGP_NODShiLtJ_G0038474.1 mouse_genomes_project 13 104137700 104137832 + Gm22661 snoRNA snoRNA MGP_NODShiLtJ_T0036042.1 MGP_NODShiLtJ_G0020078.1 mouse_genomes_project 13 10121029 10164910 + MGP_NODShiLtJ_P0036042 Heatr1 protein_coding protein_coding MGP_NODShiLtJ_T0035948.1 MGP_NODShiLtJ_G0020056.1 mouse_genomes_project 13 1201364 1219157 - MGP_NODShiLtJ_P0035948 Akr1c20 protein_coding protein_coding MGP_NODShiLtJ_T0006523.1 MGP_NODShiLtJ_G0005398.1 mouse_genomes_project 13 57652762 57657907 - 4930526F13Rik lincRNA lincRNA MGP_NODShiLtJ_T0101598.1 MGP_NODShiLtJ_G0039767.1 mouse_genomes_project 13 21140629 21141061 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037831.1 MGP_NODShiLtJ_G0020755.1 mouse_genomes_project 13 117345084 117346793 + MGP_NODShiLtJ_P0037831 3830408C21Rik protein_coding protein_coding MGP_NODShiLtJ_T0002436.1 MGP_NODShiLtJ_G0002345.1 mouse_genomes_project 13 18065664 18067892 + MGP_NODShiLtJ_P0002436 TR_C_gene TR_C_gene MGP_NODShiLtJ_T0036660.1 MGP_NODShiLtJ_G0020364.1 mouse_genomes_project 13 50646967 50648257 + MGP_NODShiLtJ_P0036660 A830005F24Rik protein_coding protein_coding MGP_NODShiLtJ_T0036355.1 MGP_NODShiLtJ_G0020236.1 mouse_genomes_project 13 26996159 27000419 + MGP_NODShiLtJ_P0036355 Prl3c1 protein_coding protein_coding MGP_NODShiLtJ_T0037930.1 MGP_NODShiLtJ_G0020790.1 mouse_genomes_project 13 124756931 125155573 + MGP_NODShiLtJ_P0037930 Arl15 protein_coding protein_coding MGP_NODShiLtJ_T0101626.1 MGP_NODShiLtJ_G0039795.1 mouse_genomes_project 13 22574956 22577013 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037522.1 MGP_NODShiLtJ_G0020651.1 mouse_genomes_project 13 100843967 100879185 + MGP_NODShiLtJ_P0037522 Dhfr protein_coding protein_coding MGP_NODShiLtJ_T0036973.1 MGP_NODShiLtJ_G0020461.1 mouse_genomes_project 13 59414932 59421005 - MGP_NODShiLtJ_P0036973 Lect2 protein_coding protein_coding MGP_NODShiLtJ_T0036727.1 MGP_NODShiLtJ_G0020387.1 mouse_genomes_project 13 53470022 53520150 + MGP_NODShiLtJ_P0036727 Spin1 protein_coding protein_coding MGP_NODShiLtJ_T0006576.1 MGP_NODShiLtJ_G0005437.1 mouse_genomes_project 13 122286095 122315434 - Gm15290 lincRNA lincRNA MGP_NODShiLtJ_T0035934.1 MGP_NODShiLtJ_G0020049.1 mouse_genomes_project 13 548211 552869 - MGP_NODShiLtJ_P0035934 Ucn3 protein_coding protein_coding MGP_NODShiLtJ_T0037876.1 MGP_NODShiLtJ_G0020767.1 mouse_genomes_project 13 122184751 122261386 - MGP_NODShiLtJ_P0037876 Gpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037877.1 MGP_NODShiLtJ_G0020767.1 mouse_genomes_project 13 122185003 122261303 - MGP_NODShiLtJ_P0037877 Gpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0037878.1 MGP_NODShiLtJ_G0020767.1 mouse_genomes_project 13 122185229 122257047 - MGP_NODShiLtJ_P0037878 Gpbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037879.1 MGP_NODShiLtJ_G0020767.1 mouse_genomes_project 13 122200479 122220329 - Gpbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0037880.1 MGP_NODShiLtJ_G0020767.1 mouse_genomes_project 13 122204418 122220288 - Gpbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0037881.1 MGP_NODShiLtJ_G0020767.1 mouse_genomes_project 13 122204488 122220329 - Gpbp1 protein_coding retained_intron MGP_NODShiLtJ_T0006588.1 MGP_NODShiLtJ_G0005445.1 mouse_genomes_project 13 131844038 131845701 + 1700074H08Rik lincRNA lincRNA MGP_NODShiLtJ_T0101606.1 MGP_NODShiLtJ_G0039775.1 mouse_genomes_project 13 21601814 21602395 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006491.1 MGP_NODShiLtJ_G0005377.1 mouse_genomes_project 13 38621078 38622075 - Gm29458 lincRNA lincRNA MGP_NODShiLtJ_T0037600.1 MGP_NODShiLtJ_G0020682.1 mouse_genomes_project 13 104535238 104541125 + MGP_NODShiLtJ_P0037600 F2rl2 protein_coding protein_coding MGP_NODShiLtJ_T0036974.1 MGP_NODShiLtJ_G0020462.1 mouse_genomes_project 13 59488529 59518230 + MGP_NODShiLtJ_P0036974 Tgfbi protein_coding protein_coding MGP_NODShiLtJ_T0037648.1 MGP_NODShiLtJ_G0020697.1 mouse_genomes_project 13 106228253 106241403 + MGP_NODShiLtJ_P0037648 Enc1 protein_coding protein_coding MGP_NODShiLtJ_T0037252.1 MGP_NODShiLtJ_G0020572.1 mouse_genomes_project 13 73426204 73520479 + MGP_NODShiLtJ_P0037252 Nsun2 protein_coding protein_coding MGP_NODShiLtJ_T0037253.1 MGP_NODShiLtJ_G0020572.1 mouse_genomes_project 13 73426226 73510957 + Nsun2 protein_coding processed_transcript MGP_NODShiLtJ_T0037256.1 MGP_NODShiLtJ_G0020572.1 mouse_genomes_project 13 73517057 73539038 + MGP_NODShiLtJ_P0037256 Nsun2 protein_coding protein_coding MGP_NODShiLtJ_T0037257.1 MGP_NODShiLtJ_G0020572.1 mouse_genomes_project 13 73517101 73538841 + MGP_NODShiLtJ_P0037257 Nsun2 protein_coding protein_coding MGP_NODShiLtJ_T0037258.1 MGP_NODShiLtJ_G0020572.1 mouse_genomes_project 13 73517611 73524605 + Nsun2 protein_coding processed_transcript MGP_NODShiLtJ_T0037259.1 MGP_NODShiLtJ_G0020572.1 mouse_genomes_project 13 73526335 73534644 + Nsun2 protein_coding retained_intron MGP_NODShiLtJ_T0037260.1 MGP_NODShiLtJ_G0020572.1 mouse_genomes_project 13 73535754 73536683 + Nsun2 protein_coding retained_intron MGP_NODShiLtJ_T0002451.1 MGP_NODShiLtJ_G0002358.1 mouse_genomes_project 13 18130398 18130458 - MGP_NODShiLtJ_P0002451 Trgj3 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0003413.1 MGP_NODShiLtJ_G0003123.1 mouse_genomes_project 13 67835392 67854684 + 1810034E14Rik antisense antisense MGP_NODShiLtJ_T0003414.1 MGP_NODShiLtJ_G0003123.1 mouse_genomes_project 13 67835464 67853014 + 1810034E14Rik antisense antisense MGP_NODShiLtJ_T0003415.1 MGP_NODShiLtJ_G0003123.1 mouse_genomes_project 13 67853016 67854684 + 1810034E14Rik antisense antisense MGP_NODShiLtJ_T0036052.1 MGP_NODShiLtJ_G0020082.1 mouse_genomes_project 13 10477741 11461603 + MGP_NODShiLtJ_P0036052 Nid1 protein_coding protein_coding MGP_NODShiLtJ_T0036055.1 MGP_NODShiLtJ_G0020082.1 mouse_genomes_project 13 11406118 11459394 + MGP_NODShiLtJ_P0036055 Nid1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012754.1 MGP_NODShiLtJ_G0010862.1 mouse_genomes_project 13 10101923 10102375 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037399.1 MGP_NODShiLtJ_G0020627.1 mouse_genomes_project 13 87261339 87299724 - MGP_NODShiLtJ_P0037399 Polr3g protein_coding protein_coding MGP_NODShiLtJ_T0037400.1 MGP_NODShiLtJ_G0020627.1 mouse_genomes_project 13 87261376 87275454 - Polr3g protein_coding retained_intron MGP_NODShiLtJ_T0037401.1 MGP_NODShiLtJ_G0020627.1 mouse_genomes_project 13 87282785 87299667 - MGP_NODShiLtJ_P0037401 Polr3g protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037402.1 MGP_NODShiLtJ_G0020627.1 mouse_genomes_project 13 87283222 87299656 - MGP_NODShiLtJ_P0037402 Polr3g protein_coding protein_coding MGP_NODShiLtJ_T0037403.1 MGP_NODShiLtJ_G0020627.1 mouse_genomes_project 13 87288094 87299713 - Polr3g protein_coding retained_intron MGP_NODShiLtJ_T0012832.1 MGP_NODShiLtJ_G0010940.1 mouse_genomes_project 13 100794918 100795167 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009820.1 MGP_NODShiLtJ_G0007953.1 mouse_genomes_project 13 2998724 2998827 - Gm26259 miRNA miRNA MGP_NODShiLtJ_T0006571.1 MGP_NODShiLtJ_G0005433.1 mouse_genomes_project 13 110912452 110987345 + lincRNA lincRNA MGP_NODShiLtJ_T0036610.1 MGP_NODShiLtJ_G0020347.1 mouse_genomes_project 13 47194412 47218753 + MGP_NODShiLtJ_P0036610 Mylip protein_coding protein_coding MGP_NODShiLtJ_T0036611.1 MGP_NODShiLtJ_G0020347.1 mouse_genomes_project 13 47194627 47218764 + MGP_NODShiLtJ_P0036611 Mylip protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037279.1 MGP_NODShiLtJ_G0020583.1 mouse_genomes_project 13 77525604 77526771 + MGP_NODShiLtJ_P0037279 Mrpl36 protein_coding protein_coding MGP_NODShiLtJ_T0037558.1 MGP_NODShiLtJ_G0020667.1 mouse_genomes_project 13 102747995 102895853 + MGP_NODShiLtJ_P0037558 Lhfpl2 protein_coding protein_coding MGP_NODShiLtJ_T0037559.1 MGP_NODShiLtJ_G0020667.1 mouse_genomes_project 13 102748031 102816223 + Lhfpl2 protein_coding retained_intron MGP_NODShiLtJ_T0037560.1 MGP_NODShiLtJ_G0020667.1 mouse_genomes_project 13 102772642 102874054 + MGP_NODShiLtJ_P0037560 Lhfpl2 protein_coding protein_coding MGP_NODShiLtJ_T0037561.1 MGP_NODShiLtJ_G0020667.1 mouse_genomes_project 13 102828734 102873740 + MGP_NODShiLtJ_P0037561 Lhfpl2 protein_coding protein_coding MGP_NODShiLtJ_T0037562.1 MGP_NODShiLtJ_G0020667.1 mouse_genomes_project 13 102872223 102894961 + MGP_NODShiLtJ_P0037562 Lhfpl2 protein_coding protein_coding MGP_NODShiLtJ_T0037563.1 MGP_NODShiLtJ_G0020667.1 mouse_genomes_project 13 102873187 102873627 + Lhfpl2 protein_coding processed_transcript MGP_NODShiLtJ_T0037564.1 MGP_NODShiLtJ_G0020667.1 mouse_genomes_project 13 102873405 102895853 + MGP_NODShiLtJ_P0037564 Lhfpl2 protein_coding protein_coding MGP_NODShiLtJ_T0037313.1 MGP_NODShiLtJ_G0020598.1 mouse_genomes_project 13 78360531 78406200 + MGP_NODShiLtJ_P0037313 Slc9a3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037314.1 MGP_NODShiLtJ_G0020598.1 mouse_genomes_project 13 78360531 78405101 + MGP_NODShiLtJ_P0037314 Slc9a3 protein_coding protein_coding MGP_NODShiLtJ_T0036897.1 MGP_NODShiLtJ_G0020431.1 mouse_genomes_project 13 58088798 58094063 - MGP_NODShiLtJ_P0036897 Mxd3 protein_coding protein_coding MGP_NODShiLtJ_T0036898.1 MGP_NODShiLtJ_G0020431.1 mouse_genomes_project 13 58089112 58094038 - Mxd3 protein_coding retained_intron MGP_NODShiLtJ_T0036899.1 MGP_NODShiLtJ_G0020431.1 mouse_genomes_project 13 58089342 58092979 - Mxd3 protein_coding processed_transcript MGP_NODShiLtJ_T0002541.1 MGP_NODShiLtJ_G0002440.1 mouse_genomes_project 13 18160888 18161483 - MGP_NODShiLtJ_P0002541 Trgv2 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0036543.1 MGP_NODShiLtJ_G0020323.1 mouse_genomes_project 13 42479966 42528996 - MGP_NODShiLtJ_P0036543 Mak protein_coding protein_coding MGP_NODShiLtJ_T0036544.1 MGP_NODShiLtJ_G0020323.1 mouse_genomes_project 13 42479966 42520340 - MGP_NODShiLtJ_P0036544 Mak protein_coding protein_coding MGP_NODShiLtJ_T0036545.1 MGP_NODShiLtJ_G0020323.1 mouse_genomes_project 13 42479966 42528996 - MGP_NODShiLtJ_P0036545 Mak protein_coding protein_coding MGP_NODShiLtJ_T0003438.1 MGP_NODShiLtJ_G0003135.1 mouse_genomes_project 13 100908274 100920420 - C030017D09Rik antisense antisense MGP_NODShiLtJ_T0037808.1 MGP_NODShiLtJ_G0020747.1 mouse_genomes_project 13 114720337 114741609 - MGP_NODShiLtJ_P0037808 Fam159b protein_coding protein_coding MGP_NODShiLtJ_T0036293.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23409410 23505100 - MGP_NODShiLtJ_P0036293 Lrrc16a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036294.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23409550 23419682 - MGP_NODShiLtJ_P0036294 Lrrc16a protein_coding protein_coding MGP_NODShiLtJ_T0036295.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23409725 23685010 - MGP_NODShiLtJ_P0036295 Lrrc16a protein_coding protein_coding MGP_NODShiLtJ_T0036296.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23410127 23684931 - MGP_NODShiLtJ_P0036296 Lrrc16a protein_coding protein_coding MGP_NODShiLtJ_T0036297.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23426944 23450142 - Lrrc16a protein_coding processed_transcript MGP_NODShiLtJ_T0036298.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23457231 23496319 - Lrrc16a protein_coding retained_intron MGP_NODShiLtJ_T0036299.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23505075 23509343 - Lrrc16a protein_coding processed_transcript MGP_NODShiLtJ_T0036300.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23535634 23685005 - Lrrc16a protein_coding retained_intron MGP_NODShiLtJ_T0036301.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23537158 23556281 - Lrrc16a protein_coding processed_transcript MGP_NODShiLtJ_T0036302.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23556508 23684701 - MGP_NODShiLtJ_P0036302 Lrrc16a protein_coding protein_coding MGP_NODShiLtJ_T0036303.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23566120 23608261 - MGP_NODShiLtJ_P0036303 Lrrc16a protein_coding protein_coding MGP_NODShiLtJ_T0036304.1 MGP_NODShiLtJ_G0020218.1 mouse_genomes_project 13 23575455 23640808 - Lrrc16a protein_coding processed_transcript MGP_NODShiLtJ_T0003392.1 MGP_NODShiLtJ_G0003109.1 mouse_genomes_project 13 34757103 34759728 + 1110046J04Rik antisense antisense MGP_NODShiLtJ_T0003393.1 MGP_NODShiLtJ_G0003109.1 mouse_genomes_project 13 34757356 34758177 + 1110046J04Rik antisense antisense MGP_NODShiLtJ_T0003394.1 MGP_NODShiLtJ_G0003109.1 mouse_genomes_project 13 34757578 34790957 + 1110046J04Rik antisense antisense MGP_NODShiLtJ_T0097759.1 MGP_NODShiLtJ_G0036171.1 mouse_genomes_project 13 80150797 80151116 + pseudogene pseudogene MGP_NODShiLtJ_T0006568.1 MGP_NODShiLtJ_G0005430.1 mouse_genomes_project 13 108649426 108654286 - lincRNA lincRNA MGP_NODShiLtJ_T0036788.1 MGP_NODShiLtJ_G0020409.1 mouse_genomes_project 13 57162283 57218483 + MGP_NODShiLtJ_P0036788 protein_coding protein_coding MGP_NODShiLtJ_T0036789.1 MGP_NODShiLtJ_G0020409.1 mouse_genomes_project 13 57162283 57218483 + MGP_NODShiLtJ_P0036789 protein_coding protein_coding MGP_NODShiLtJ_T0036790.1 MGP_NODShiLtJ_G0020409.1 mouse_genomes_project 13 57162308 57207263 + MGP_NODShiLtJ_P0036790 protein_coding protein_coding MGP_NODShiLtJ_T0036791.1 MGP_NODShiLtJ_G0020409.1 mouse_genomes_project 13 57162313 57207262 + MGP_NODShiLtJ_P0036791 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036792.1 MGP_NODShiLtJ_G0020409.1 mouse_genomes_project 13 57171296 57184367 + protein_coding processed_transcript MGP_NODShiLtJ_T0036793.1 MGP_NODShiLtJ_G0020409.1 mouse_genomes_project 13 57193865 57207379 + protein_coding retained_intron MGP_NODShiLtJ_T0036794.1 MGP_NODShiLtJ_G0020409.1 mouse_genomes_project 13 57212544 57216505 + protein_coding retained_intron MGP_NODShiLtJ_T0035937.1 MGP_NODShiLtJ_G0020051.1 mouse_genomes_project 13 757643 775280 - MGP_NODShiLtJ_P0035937 Akr1c18 protein_coding protein_coding MGP_NODShiLtJ_T0035938.1 MGP_NODShiLtJ_G0020051.1 mouse_genomes_project 13 757643 775306 - MGP_NODShiLtJ_P0035938 Akr1c18 protein_coding protein_coding MGP_NODShiLtJ_T0098799.1 MGP_NODShiLtJ_G0037193.1 mouse_genomes_project 13 23896171 23896274 - Gm22013 snRNA snRNA MGP_NODShiLtJ_T0036151.1 MGP_NODShiLtJ_G0020124.1 mouse_genomes_project 13 20367642 20384783 - MGP_NODShiLtJ_P0036151 protein_coding protein_coding MGP_NODShiLtJ_T0036152.1 MGP_NODShiLtJ_G0020124.1 mouse_genomes_project 13 20367642 20384825 - MGP_NODShiLtJ_P0036152 protein_coding protein_coding MGP_NODShiLtJ_T0036153.1 MGP_NODShiLtJ_G0020124.1 mouse_genomes_project 13 20369222 20376233 - MGP_NODShiLtJ_P0036153 protein_coding protein_coding MGP_NODShiLtJ_T0036154.1 MGP_NODShiLtJ_G0020124.1 mouse_genomes_project 13 20369908 20384765 - MGP_NODShiLtJ_P0036154 protein_coding protein_coding MGP_NODShiLtJ_T0036155.1 MGP_NODShiLtJ_G0020124.1 mouse_genomes_project 13 20373362 20377986 - MGP_NODShiLtJ_P0036155 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036156.1 MGP_NODShiLtJ_G0020124.1 mouse_genomes_project 13 20374701 20384786 - MGP_NODShiLtJ_P0036156 protein_coding protein_coding MGP_NODShiLtJ_T0036157.1 MGP_NODShiLtJ_G0020124.1 mouse_genomes_project 13 20383624 20384740 - protein_coding processed_transcript MGP_NODShiLtJ_T0036231.1 MGP_NODShiLtJ_G0020177.1 mouse_genomes_project 13 22013127 22014117 - MGP_NODShiLtJ_P0036231 Vmn1r211 protein_coding protein_coding MGP_NODShiLtJ_T0037090.1 MGP_NODShiLtJ_G0020497.1 mouse_genomes_project 13 64246116 64252643 - MGP_NODShiLtJ_P0037090 Ctsq protein_coding protein_coding MGP_NODShiLtJ_T0037091.1 MGP_NODShiLtJ_G0020497.1 mouse_genomes_project 13 64246126 64250259 - Ctsq protein_coding retained_intron MGP_NODShiLtJ_T0036360.1 MGP_NODShiLtJ_G0020240.1 mouse_genomes_project 13 27188217 27208720 + MGP_NODShiLtJ_P0036360 Prl8a2 protein_coding protein_coding MGP_NODShiLtJ_T0036361.1 MGP_NODShiLtJ_G0020240.1 mouse_genomes_project 13 27188223 27208708 + MGP_NODShiLtJ_P0036361 Prl8a2 protein_coding protein_coding MGP_NODShiLtJ_T0037237.1 MGP_NODShiLtJ_G0020562.1 mouse_genomes_project 13 71745157 71758114 + MGP_NODShiLtJ_P0037237 Zfp493 protein_coding protein_coding MGP_NODShiLtJ_T0037238.1 MGP_NODShiLtJ_G0020562.1 mouse_genomes_project 13 71745157 71755356 + MGP_NODShiLtJ_P0037238 Zfp493 protein_coding protein_coding MGP_NODShiLtJ_T0037239.1 MGP_NODShiLtJ_G0020562.1 mouse_genomes_project 13 71752066 71756196 + Zfp493 protein_coding retained_intron MGP_NODShiLtJ_T0037264.1 MGP_NODShiLtJ_G0020577.1 mouse_genomes_project 13 74725227 74844475 - MGP_NODShiLtJ_P0037264 Adamts16 protein_coding protein_coding MGP_NODShiLtJ_T0037265.1 MGP_NODShiLtJ_G0020577.1 mouse_genomes_project 13 74725235 74844439 - MGP_NODShiLtJ_P0037265 Adamts16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037266.1 MGP_NODShiLtJ_G0020577.1 mouse_genomes_project 13 74759775 74844475 - MGP_NODShiLtJ_P0037266 Adamts16 protein_coding protein_coding MGP_NODShiLtJ_T0037267.1 MGP_NODShiLtJ_G0020577.1 mouse_genomes_project 13 74836415 74844472 - Adamts16 protein_coding retained_intron MGP_NODShiLtJ_T0012759.1 MGP_NODShiLtJ_G0010867.1 mouse_genomes_project 13 20359954 20360394 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037344.1 MGP_NODShiLtJ_G0020611.1 mouse_genomes_project 13 80341542 80352490 + MGP_NODShiLtJ_P0037344 Glrx protein_coding protein_coding MGP_NODShiLtJ_T0009870.1 MGP_NODShiLtJ_G0008003.1 mouse_genomes_project 13 107716067 107716169 + Gm22698 miRNA miRNA MGP_NODShiLtJ_T0037619.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105556750 105579836 - MGP_NODShiLtJ_P0037619 Hmgcr protein_coding protein_coding MGP_NODShiLtJ_T0037620.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105558059 105575663 - MGP_NODShiLtJ_P0037620 Hmgcr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037621.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105558226 105560587 - MGP_NODShiLtJ_P0037621 Hmgcr protein_coding protein_coding MGP_NODShiLtJ_T0037622.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105559137 105575610 - MGP_NODShiLtJ_P0037622 Hmgcr protein_coding protein_coding MGP_NODShiLtJ_T0037623.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105559904 105564443 - MGP_NODShiLtJ_P0037623 Hmgcr protein_coding protein_coding MGP_NODShiLtJ_T0037624.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105567782 105579775 - Hmgcr protein_coding retained_intron MGP_NODShiLtJ_T0037625.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105569048 105579723 - MGP_NODShiLtJ_P0037625 Hmgcr protein_coding protein_coding MGP_NODShiLtJ_T0037626.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105574604 105575487 - Hmgcr protein_coding retained_intron MGP_NODShiLtJ_T0037627.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105575014 105578554 - MGP_NODShiLtJ_P0037627 Hmgcr protein_coding protein_coding MGP_NODShiLtJ_T0037628.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105575019 105579382 - MGP_NODShiLtJ_P0037628 Hmgcr protein_coding protein_coding MGP_NODShiLtJ_T0037629.1 MGP_NODShiLtJ_G0020690.1 mouse_genomes_project 13 105575217 105579748 - Hmgcr protein_coding retained_intron MGP_NODShiLtJ_T0012768.1 MGP_NODShiLtJ_G0010876.1 mouse_genomes_project 13 21799475 21800785 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036268.1 MGP_NODShiLtJ_G0020204.1 mouse_genomes_project 13 23114483 23114972 - MGP_NODShiLtJ_P0036268 Hist1h3c protein_coding protein_coding MGP_NODShiLtJ_T0036871.1 MGP_NODShiLtJ_G0020424.1 mouse_genomes_project 13 57759068 57845087 - MGP_NODShiLtJ_P0036871 Uimc1 protein_coding protein_coding MGP_NODShiLtJ_T0036872.1 MGP_NODShiLtJ_G0020424.1 mouse_genomes_project 13 57759068 57845082 - MGP_NODShiLtJ_P0036872 Uimc1 protein_coding protein_coding MGP_NODShiLtJ_T0036873.1 MGP_NODShiLtJ_G0020424.1 mouse_genomes_project 13 57759383 57845041 - MGP_NODShiLtJ_P0036873 Uimc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036874.1 MGP_NODShiLtJ_G0020424.1 mouse_genomes_project 13 57759483 57845087 - MGP_NODShiLtJ_P0036874 Uimc1 protein_coding protein_coding MGP_NODShiLtJ_T0036875.1 MGP_NODShiLtJ_G0020424.1 mouse_genomes_project 13 57759708 57836780 - MGP_NODShiLtJ_P0036875 Uimc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036876.1 MGP_NODShiLtJ_G0020424.1 mouse_genomes_project 13 57810961 57845086 - Uimc1 protein_coding retained_intron MGP_NODShiLtJ_T0011246.1 MGP_NODShiLtJ_G0009379.1 mouse_genomes_project 13 59587158 59587285 + Gm27301 misc_RNA misc_RNA MGP_NODShiLtJ_T0100076.1 MGP_NODShiLtJ_G0038470.1 mouse_genomes_project 13 92608477 92608537 - Gm22574 snoRNA snoRNA MGP_NODShiLtJ_T0100078.1 MGP_NODShiLtJ_G0038472.1 mouse_genomes_project 13 100185155 100185283 + Gm22778 snoRNA snoRNA MGP_NODShiLtJ_T0036785.1 MGP_NODShiLtJ_G0020408.1 mouse_genomes_project 13 57103151 57113169 - MGP_NODShiLtJ_P0036785 Thoc3 protein_coding protein_coding MGP_NODShiLtJ_T0036786.1 MGP_NODShiLtJ_G0020408.1 mouse_genomes_project 13 57107993 57113108 - Thoc3 protein_coding processed_transcript MGP_NODShiLtJ_T0036787.1 MGP_NODShiLtJ_G0020408.1 mouse_genomes_project 13 57112111 57113146 - Thoc3 protein_coding retained_intron MGP_NODShiLtJ_T0009860.1 MGP_NODShiLtJ_G0007993.1 mouse_genomes_project 13 75117590 75117711 + Mir466f-4 miRNA miRNA MGP_NODShiLtJ_T0006532.1 MGP_NODShiLtJ_G0005405.1 mouse_genomes_project 13 71518762 71520456 - Gm37276 lincRNA lincRNA MGP_NODShiLtJ_T0000852.1 MGP_NODShiLtJ_G0000782.1 mouse_genomes_project 13 16655815 16662565 + TEC TEC MGP_NODShiLtJ_T0036738.1 MGP_NODShiLtJ_G0020393.1 mouse_genomes_project 13 54112403 54129177 - MGP_NODShiLtJ_P0036738 Gm15440 protein_coding protein_coding MGP_NODShiLtJ_T0006526.1 MGP_NODShiLtJ_G0005400.1 mouse_genomes_project 13 59062890 59088360 - 4930550C17Rik lincRNA lincRNA MGP_NODShiLtJ_T0037003.1 MGP_NODShiLtJ_G0020471.1 mouse_genomes_project 13 61316253 61387924 - MGP_NODShiLtJ_P0037003 Kif27 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006573.1 MGP_NODShiLtJ_G0005435.1 mouse_genomes_project 13 118056015 118060790 + 1700006H21Rik lincRNA lincRNA MGP_NODShiLtJ_T0006574.1 MGP_NODShiLtJ_G0005435.1 mouse_genomes_project 13 118056015 118060779 + 1700006H21Rik lincRNA lincRNA MGP_NODShiLtJ_T0097928.1 MGP_NODShiLtJ_G0036340.1 mouse_genomes_project 13 23042555 23042663 - Gm24991 rRNA rRNA MGP_NODShiLtJ_T0012750.1 MGP_NODShiLtJ_G0010858.1 mouse_genomes_project 13 5466000 5471344 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036050.1 MGP_NODShiLtJ_G0020081.1 mouse_genomes_project 13 10313857 10391188 + MGP_NODShiLtJ_P0036050 Ero1lb protein_coding protein_coding MGP_NODShiLtJ_T0036051.1 MGP_NODShiLtJ_G0020081.1 mouse_genomes_project 13 10314051 10360161 + MGP_NODShiLtJ_P0036051 Ero1lb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012829.1 MGP_NODShiLtJ_G0010937.1 mouse_genomes_project 13 94983511 94984517 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0002438.1 MGP_NODShiLtJ_G0002347.1 mouse_genomes_project 13 18122214 18126704 - MGP_NODShiLtJ_P0002438 Tcrg-C2 TR_C_gene TR_C_gene MGP_NODShiLtJ_T0097758.1 MGP_NODShiLtJ_G0036170.1 mouse_genomes_project 13 48982849 48983368 + pseudogene pseudogene MGP_NODShiLtJ_T0012846.1 MGP_NODShiLtJ_G0010954.1 mouse_genomes_project 13 126722637 126726508 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009871.1 MGP_NODShiLtJ_G0008004.1 mouse_genomes_project 13 118200030 118200201 - Gm22118 miRNA miRNA MGP_NODShiLtJ_T0037823.1 MGP_NODShiLtJ_G0020754.1 mouse_genomes_project 13 117253502 117333413 - MGP_NODShiLtJ_P0037823 Kif2a protein_coding protein_coding MGP_NODShiLtJ_T0037824.1 MGP_NODShiLtJ_G0020754.1 mouse_genomes_project 13 117256776 117333409 - MGP_NODShiLtJ_P0037824 Kif2a protein_coding protein_coding MGP_NODShiLtJ_T0037825.1 MGP_NODShiLtJ_G0020754.1 mouse_genomes_project 13 117257368 117333421 - MGP_NODShiLtJ_P0037825 Kif2a protein_coding protein_coding MGP_NODShiLtJ_T0037826.1 MGP_NODShiLtJ_G0020754.1 mouse_genomes_project 13 117257637 117307663 - MGP_NODShiLtJ_P0037826 Kif2a protein_coding protein_coding MGP_NODShiLtJ_T0037827.1 MGP_NODShiLtJ_G0020754.1 mouse_genomes_project 13 117259271 117333322 - MGP_NODShiLtJ_P0037827 Kif2a protein_coding protein_coding MGP_NODShiLtJ_T0037828.1 MGP_NODShiLtJ_G0020754.1 mouse_genomes_project 13 117276732 117286191 - MGP_NODShiLtJ_P0037828 Kif2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037829.1 MGP_NODShiLtJ_G0020754.1 mouse_genomes_project 13 117288804 117333044 - MGP_NODShiLtJ_P0037829 Kif2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037830.1 MGP_NODShiLtJ_G0020754.1 mouse_genomes_project 13 117297641 117304827 - MGP_NODShiLtJ_P0037830 Kif2a protein_coding protein_coding MGP_NODShiLtJ_T0036464.1 MGP_NODShiLtJ_G0020289.1 mouse_genomes_project 13 34972633 34977320 - MGP_NODShiLtJ_P0036464 protein_coding protein_coding MGP_NODShiLtJ_T0036240.1 MGP_NODShiLtJ_G0020186.1 mouse_genomes_project 13 22530451 22531348 + MGP_NODShiLtJ_P0036240 Vmn1r191 protein_coding protein_coding MGP_NODShiLtJ_T0036553.1 MGP_NODShiLtJ_G0020328.1 mouse_genomes_project 13 42734297 42734472 - MGP_NODShiLtJ_P0036553 Gm17364 protein_coding protein_coding MGP_NODShiLtJ_T0009840.1 MGP_NODShiLtJ_G0007973.1 mouse_genomes_project 13 50669574 50669677 - Mirlet7d miRNA miRNA MGP_NODShiLtJ_T0017219.1 MGP_NODShiLtJ_G0015118.1 mouse_genomes_project 13 21088637 21093695 + Gm11292 processed_transcript processed_transcript MGP_NODShiLtJ_T0036086.1 MGP_NODShiLtJ_G0020093.1 mouse_genomes_project 13 12741384 12744099 - MGP_NODShiLtJ_P0036086 Mrpl32 protein_coding protein_coding MGP_NODShiLtJ_T0098807.1 MGP_NODShiLtJ_G0037201.1 mouse_genomes_project 13 43428840 43428944 + Gm22157 snRNA snRNA MGP_NODShiLtJ_T0036351.1 MGP_NODShiLtJ_G0020232.1 mouse_genomes_project 13 26835877 26846539 + MGP_NODShiLtJ_P0036351 Prl protein_coding protein_coding MGP_NODShiLtJ_T0036893.1 MGP_NODShiLtJ_G0020428.1 mouse_genomes_project 13 57964138 58081956 + MGP_NODShiLtJ_P0036893 Nsd1 protein_coding protein_coding MGP_NODShiLtJ_T0036894.1 MGP_NODShiLtJ_G0020428.1 mouse_genomes_project 13 57966918 58077359 + MGP_NODShiLtJ_P0036894 Nsd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036140.1 MGP_NODShiLtJ_G0020119.1 mouse_genomes_project 13 20148694 20149663 + Trim27 protein_coding processed_transcript MGP_NODShiLtJ_T0036141.1 MGP_NODShiLtJ_G0020119.1 mouse_genomes_project 13 20149459 20163757 + MGP_NODShiLtJ_P0036141 Trim27 protein_coding protein_coding MGP_NODShiLtJ_T0036142.1 MGP_NODShiLtJ_G0020119.1 mouse_genomes_project 13 20159101 20159661 + Trim27 protein_coding retained_intron MGP_NODShiLtJ_T0036143.1 MGP_NODShiLtJ_G0020119.1 mouse_genomes_project 13 20159332 20161716 + MGP_NODShiLtJ_P0036143 Trim27 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037606.1 MGP_NODShiLtJ_G0020685.1 mouse_genomes_project 13 105272714 105301234 + MGP_NODShiLtJ_P0037606 Poc5 protein_coding protein_coding MGP_NODShiLtJ_T0100055.1 MGP_NODShiLtJ_G0038449.1 mouse_genomes_project 13 37735556 37735688 + Gm26395 snoRNA snoRNA MGP_NODShiLtJ_T0003454.1 MGP_NODShiLtJ_G0003145.1 mouse_genomes_project 13 117134400 117136277 + Gm28988 antisense antisense MGP_NODShiLtJ_T0012760.1 MGP_NODShiLtJ_G0010868.1 mouse_genomes_project 13 20496653 20497328 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037082.1 MGP_NODShiLtJ_G0020490.1 mouse_genomes_project 13 63993085 63997681 - MGP_NODShiLtJ_P0037082 Ctsll3 protein_coding protein_coding MGP_NODShiLtJ_T0036630.1 MGP_NODShiLtJ_G0020356.1 mouse_genomes_project 13 48691430 48890122 - MGP_NODShiLtJ_P0036630 Kif13a protein_coding protein_coding MGP_NODShiLtJ_T0036631.1 MGP_NODShiLtJ_G0020356.1 mouse_genomes_project 13 48691431 48889983 - MGP_NODShiLtJ_P0036631 Kif13a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036146.1 MGP_NODShiLtJ_G0020121.1 mouse_genomes_project 13 20285127 20293454 + MGP_NODShiLtJ_P0036146 Gpx6 protein_coding protein_coding MGP_NODShiLtJ_T0036147.1 MGP_NODShiLtJ_G0020121.1 mouse_genomes_project 13 20291093 20293458 + Gpx6 protein_coding processed_transcript MGP_NODShiLtJ_T0003379.1 MGP_NODShiLtJ_G0003098.1 mouse_genomes_project 13 20791988 20793332 + Gm11274 antisense antisense MGP_NODShiLtJ_T0036356.1 MGP_NODShiLtJ_G0020237.1 mouse_genomes_project 13 27048474 27061030 + MGP_NODShiLtJ_P0036356 Prl3b1 protein_coding protein_coding MGP_NODShiLtJ_T0101607.1 MGP_NODShiLtJ_G0039776.1 mouse_genomes_project 13 21606243 21606608 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037330.1 MGP_NODShiLtJ_G0020603.1 mouse_genomes_project 13 78610532 78626418 + MGP_NODShiLtJ_P0037330 Ccdc127 protein_coding protein_coding MGP_NODShiLtJ_T0037331.1 MGP_NODShiLtJ_G0020603.1 mouse_genomes_project 13 78610540 78623336 + MGP_NODShiLtJ_P0037331 Ccdc127 protein_coding protein_coding MGP_NODShiLtJ_T0037332.1 MGP_NODShiLtJ_G0020603.1 mouse_genomes_project 13 78610567 78621720 + MGP_NODShiLtJ_P0037332 Ccdc127 protein_coding protein_coding MGP_NODShiLtJ_T0037333.1 MGP_NODShiLtJ_G0020603.1 mouse_genomes_project 13 78610568 78621330 + MGP_NODShiLtJ_P0037333 Ccdc127 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037334.1 MGP_NODShiLtJ_G0020603.1 mouse_genomes_project 13 78610588 78617675 + MGP_NODShiLtJ_P0037334 Ccdc127 protein_coding protein_coding MGP_NODShiLtJ_T0003451.1 MGP_NODShiLtJ_G0003142.1 mouse_genomes_project 13 112385831 112389133 + Gm17160 antisense antisense MGP_NODShiLtJ_T0100077.1 MGP_NODShiLtJ_G0038471.1 mouse_genomes_project 13 98290614 98290748 + Gm24507 snoRNA snoRNA MGP_NODShiLtJ_T0037607.1 MGP_NODShiLtJ_G0020686.1 mouse_genomes_project 13 105301780 105323987 - Ankdd1b protein_coding processed_transcript MGP_NODShiLtJ_T0037608.1 MGP_NODShiLtJ_G0020686.1 mouse_genomes_project 13 105302092 105359746 - MGP_NODShiLtJ_P0037608 Ankdd1b protein_coding protein_coding MGP_NODShiLtJ_T0037609.1 MGP_NODShiLtJ_G0020686.1 mouse_genomes_project 13 105302403 105323348 - Ankdd1b protein_coding retained_intron MGP_NODShiLtJ_T0037610.1 MGP_NODShiLtJ_G0020686.1 mouse_genomes_project 13 105302741 105323314 - MGP_NODShiLtJ_P0037610 Ankdd1b protein_coding protein_coding MGP_NODShiLtJ_T0037611.1 MGP_NODShiLtJ_G0020686.1 mouse_genomes_project 13 105323305 105333124 - Ankdd1b protein_coding retained_intron MGP_NODShiLtJ_T0037612.1 MGP_NODShiLtJ_G0020686.1 mouse_genomes_project 13 105331446 105359784 - MGP_NODShiLtJ_P0037612 Ankdd1b protein_coding protein_coding MGP_NODShiLtJ_T0036115.1 MGP_NODShiLtJ_G0020107.1 mouse_genomes_project 13 18184155 18195964 - Stard3nl protein_coding retained_intron MGP_NODShiLtJ_T0036116.1 MGP_NODShiLtJ_G0020107.1 mouse_genomes_project 13 18184158 18185608 - Stard3nl protein_coding retained_intron MGP_NODShiLtJ_T0036117.1 MGP_NODShiLtJ_G0020107.1 mouse_genomes_project 13 18184158 18230981 - MGP_NODShiLtJ_P0036117 Stard3nl protein_coding protein_coding MGP_NODShiLtJ_T0036118.1 MGP_NODShiLtJ_G0020107.1 mouse_genomes_project 13 18184483 18198369 - Stard3nl protein_coding retained_intron MGP_NODShiLtJ_T0036119.1 MGP_NODShiLtJ_G0020107.1 mouse_genomes_project 13 18192963 18230968 - MGP_NODShiLtJ_P0036119 Stard3nl protein_coding protein_coding MGP_NODShiLtJ_T0036120.1 MGP_NODShiLtJ_G0020107.1 mouse_genomes_project 13 18197407 18231029 - Stard3nl protein_coding retained_intron MGP_NODShiLtJ_T0036121.1 MGP_NODShiLtJ_G0020107.1 mouse_genomes_project 13 18198324 18204671 - Stard3nl protein_coding retained_intron MGP_NODShiLtJ_T0036122.1 MGP_NODShiLtJ_G0020107.1 mouse_genomes_project 13 18204597 18230993 - MGP_NODShiLtJ_P0036122 Stard3nl protein_coding protein_coding MGP_NODShiLtJ_T0012777.1 MGP_NODShiLtJ_G0010885.1 mouse_genomes_project 13 23729128 23729575 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037168.1 MGP_NODShiLtJ_G0020527.1 mouse_genomes_project 13 68807546 68808473 + MGP_NODShiLtJ_P0037168 Olfr466 protein_coding protein_coding MGP_NODShiLtJ_T0000863.1 MGP_NODShiLtJ_G0000792.1 mouse_genomes_project 13 71318864 71320695 + TEC TEC MGP_NODShiLtJ_T0037833.1 MGP_NODShiLtJ_G0020757.1 mouse_genomes_project 13 118438829 118441653 + MGP_NODShiLtJ_P0037833 Smim15 protein_coding protein_coding MGP_NODShiLtJ_T0000866.1 MGP_NODShiLtJ_G0000795.1 mouse_genomes_project 13 84299799 84300261 - TEC TEC MGP_NODShiLtJ_T0012789.1 MGP_NODShiLtJ_G0010897.1 mouse_genomes_project 13 29274726 29275235 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012830.1 MGP_NODShiLtJ_G0010938.1 mouse_genomes_project 13 95561087 95561883 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006552.1 MGP_NODShiLtJ_G0005418.1 mouse_genomes_project 13 90196876 90243825 - Gm17750 lincRNA lincRNA MGP_NODShiLtJ_T0036773.1 MGP_NODShiLtJ_G0020399.1 mouse_genomes_project 13 55489359 55502988 - MGP_NODShiLtJ_P0036773 Nfil3 protein_coding protein_coding MGP_NODShiLtJ_T0037383.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 86589249 86801076 - MGP_NODShiLtJ_P0037383 Adgrv1 protein_coding protein_coding MGP_NODShiLtJ_T0037384.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 86589257 87215889 - MGP_NODShiLtJ_P0037384 Adgrv1 protein_coding protein_coding MGP_NODShiLtJ_T0037385.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 86589258 87002399 - MGP_NODShiLtJ_P0037385 Adgrv1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037386.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 86601146 86879525 - Adgrv1 protein_coding processed_transcript MGP_NODShiLtJ_T0037387.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 86902183 87215763 - MGP_NODShiLtJ_P0037387 Adgrv1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037388.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 86902183 87156858 - MGP_NODShiLtJ_P0037388 Adgrv1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037389.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87065951 87137326 - MGP_NODShiLtJ_P0037389 Adgrv1 protein_coding protein_coding MGP_NODShiLtJ_T0037390.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87065952 87151583 - Adgrv1 protein_coding retained_intron MGP_NODShiLtJ_T0037391.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87065952 87094832 - Adgrv1 protein_coding retained_intron MGP_NODShiLtJ_T0037392.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87104934 87108037 - Adgrv1 protein_coding retained_intron MGP_NODShiLtJ_T0037393.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87122412 87124728 - Adgrv1 protein_coding retained_intron MGP_NODShiLtJ_T0037394.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87126187 87215874 - MGP_NODShiLtJ_P0037394 Adgrv1 protein_coding protein_coding MGP_NODShiLtJ_T0037395.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87144111 87215874 - MGP_NODShiLtJ_P0037395 Adgrv1 protein_coding protein_coding MGP_NODShiLtJ_T0037396.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87145726 87215876 - MGP_NODShiLtJ_P0037396 Adgrv1 protein_coding protein_coding MGP_NODShiLtJ_T0037397.1 MGP_NODShiLtJ_G0020625.1 mouse_genomes_project 13 87148026 87150808 - Adgrv1 protein_coding retained_intron MGP_NODShiLtJ_T0098273.1 MGP_NODShiLtJ_G0036681.1 mouse_genomes_project 13 99786200 99786653 - Gm29540 sense_intronic sense_intronic MGP_NODShiLtJ_T0037911.1 MGP_NODShiLtJ_G0020779.1 mouse_genomes_project 13 123868838 123872241 + MGP_NODShiLtJ_P0037911 Ccno protein_coding protein_coding MGP_NODShiLtJ_T0037212.1 MGP_NODShiLtJ_G0020549.1 mouse_genomes_project 13 71185210 71252415 - MGP_NODShiLtJ_P0037212 protein_coding protein_coding MGP_NODShiLtJ_T0009835.1 MGP_NODShiLtJ_G0007968.1 mouse_genomes_project 13 28835359 28835452 - Mir6368 miRNA miRNA MGP_NODShiLtJ_T0101639.1 MGP_NODShiLtJ_G0039808.1 mouse_genomes_project 13 34534885 34538665 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037932.1 MGP_NODShiLtJ_G0020792.1 mouse_genomes_project 13 125490062 125497322 - MGP_NODShiLtJ_P0037932 Fst protein_coding protein_coding MGP_NODShiLtJ_T0037933.1 MGP_NODShiLtJ_G0020792.1 mouse_genomes_project 13 125491223 125497178 - MGP_NODShiLtJ_P0037933 Fst protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003423.1 MGP_NODShiLtJ_G0003129.1 mouse_genomes_project 13 77918183 77928241 + Slc6a19os antisense antisense MGP_NODShiLtJ_T0003424.1 MGP_NODShiLtJ_G0003129.1 mouse_genomes_project 13 77922095 77927302 + Slc6a19os antisense antisense MGP_NODShiLtJ_T0009825.1 MGP_NODShiLtJ_G0007958.1 mouse_genomes_project 13 20433663 20433744 + Mir1896 miRNA miRNA MGP_NODShiLtJ_T0036784.1 MGP_NODShiLtJ_G0020407.1 mouse_genomes_project 13 57017289 57029833 + MGP_NODShiLtJ_P0036784 Cplx2 protein_coding protein_coding MGP_NODShiLtJ_T0037162.1 MGP_NODShiLtJ_G0020524.1 mouse_genomes_project 13 68671102 68679290 - MGP_NODShiLtJ_P0037162 Prss47 protein_coding protein_coding MGP_NODShiLtJ_T0037163.1 MGP_NODShiLtJ_G0020524.1 mouse_genomes_project 13 68671411 68678377 - MGP_NODShiLtJ_P0037163 Prss47 protein_coding protein_coding MGP_NODShiLtJ_T0100062.1 MGP_NODShiLtJ_G0038456.1 mouse_genomes_project 13 54066969 54067105 + Gm22806 snoRNA snoRNA MGP_NODShiLtJ_T0006545.1 MGP_NODShiLtJ_G0005415.1 mouse_genomes_project 13 89848619 90030286 + lincRNA lincRNA MGP_NODShiLtJ_T0006546.1 MGP_NODShiLtJ_G0005415.1 mouse_genomes_project 13 89848619 89872464 + lincRNA lincRNA MGP_NODShiLtJ_T0006548.1 MGP_NODShiLtJ_G0005415.1 mouse_genomes_project 13 89856735 89866825 + lincRNA lincRNA MGP_NODShiLtJ_T0006549.1 MGP_NODShiLtJ_G0005415.1 mouse_genomes_project 13 89861308 89866677 + lincRNA lincRNA MGP_NODShiLtJ_T0006550.1 MGP_NODShiLtJ_G0005415.1 mouse_genomes_project 13 89870018 90045237 + lincRNA lincRNA MGP_NODShiLtJ_T0036482.1 MGP_NODShiLtJ_G0020298.1 mouse_genomes_project 13 35841994 35910019 - MGP_NODShiLtJ_P0036482 Eci2 protein_coding protein_coding MGP_NODShiLtJ_T0036483.1 MGP_NODShiLtJ_G0020298.1 mouse_genomes_project 13 35885603 35909732 - MGP_NODShiLtJ_P0036483 Eci2 protein_coding protein_coding MGP_NODShiLtJ_T0036484.1 MGP_NODShiLtJ_G0020298.1 mouse_genomes_project 13 35886563 35904139 - Eci2 protein_coding processed_transcript MGP_NODShiLtJ_T0036485.1 MGP_NODShiLtJ_G0020298.1 mouse_genomes_project 13 35888113 35904882 - Eci2 protein_coding processed_transcript MGP_NODShiLtJ_T0036486.1 MGP_NODShiLtJ_G0020298.1 mouse_genomes_project 13 35901212 35903673 - Eci2 protein_coding retained_intron MGP_NODShiLtJ_T0000882.1 MGP_NODShiLtJ_G0000811.1 mouse_genomes_project 13 125230229 125241480 + TEC TEC MGP_NODShiLtJ_T0037810.1 MGP_NODShiLtJ_G0020749.1 mouse_genomes_project 13 114972874 115030624 + MGP_NODShiLtJ_P0037810 4933425L06Rik protein_coding protein_coding MGP_NODShiLtJ_T0012803.1 MGP_NODShiLtJ_G0010911.1 mouse_genomes_project 13 46976117 46977120 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006538.1 MGP_NODShiLtJ_G0005410.1 mouse_genomes_project 13 84288099 84303664 + Gm29318 lincRNA lincRNA MGP_NODShiLtJ_T0006493.1 MGP_NODShiLtJ_G0005379.1 mouse_genomes_project 13 40224438 40230329 - Gm26514 lincRNA lincRNA MGP_NODShiLtJ_T0037068.1 MGP_NODShiLtJ_G0020481.1 mouse_genomes_project 13 62816010 62834038 - MGP_NODShiLtJ_P0037068 Spata31d1a protein_coding protein_coding MGP_NODShiLtJ_T0037244.1 MGP_NODShiLtJ_G0020565.1 mouse_genomes_project 13 71828486 71839891 + MGP_NODShiLtJ_P0037244 Gm10037 protein_coding protein_coding MGP_NODShiLtJ_T0012828.1 MGP_NODShiLtJ_G0010936.1 mouse_genomes_project 13 90972937 90973681 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003425.1 MGP_NODShiLtJ_G0003130.1 mouse_genomes_project 13 78242852 78244050 - Gm15912 antisense antisense MGP_NODShiLtJ_T0000868.1 MGP_NODShiLtJ_G0000797.1 mouse_genomes_project 13 91853570 91853808 - TEC TEC MGP_NODShiLtJ_T0006452.1 MGP_NODShiLtJ_G0005349.1 mouse_genomes_project 13 6863364 6867911 + Gm26601 lincRNA lincRNA MGP_NODShiLtJ_T0037680.1 MGP_NODShiLtJ_G0020711.1 mouse_genomes_project 13 108556037 108581769 - MGP_NODShiLtJ_P0037680 Ptcd2 protein_coding protein_coding MGP_NODShiLtJ_T0037208.1 MGP_NODShiLtJ_G0020546.1 mouse_genomes_project 13 71131096 71177612 - MGP_NODShiLtJ_P0037208 Gm28044 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037209.1 MGP_NODShiLtJ_G0020546.1 mouse_genomes_project 13 71134177 71162956 - Gm28044 protein_coding processed_transcript MGP_NODShiLtJ_T0037449.1 MGP_NODShiLtJ_G0020634.1 mouse_genomes_project 13 92608307 92609937 - MGP_NODShiLtJ_P0037449 Cox7c protein_coding protein_coding MGP_NODShiLtJ_T0037450.1 MGP_NODShiLtJ_G0020634.1 mouse_genomes_project 13 92608307 92610381 - MGP_NODShiLtJ_P0037450 Cox7c protein_coding protein_coding MGP_NODShiLtJ_T0037451.1 MGP_NODShiLtJ_G0020634.1 mouse_genomes_project 13 92608312 92609824 - MGP_NODShiLtJ_P0037451 Cox7c protein_coding protein_coding MGP_NODShiLtJ_T0037452.1 MGP_NODShiLtJ_G0020634.1 mouse_genomes_project 13 92608386 92610251 - Cox7c protein_coding processed_transcript MGP_NODShiLtJ_T0037710.1 MGP_NODShiLtJ_G0020721.1 mouse_genomes_project 13 109594259 109628373 - MGP_NODShiLtJ_P0037710 protein_coding protein_coding MGP_NODShiLtJ_T0036517.1 MGP_NODShiLtJ_G0020311.1 mouse_genomes_project 13 39365094 39420648 + MGP_NODShiLtJ_P0036517 Dsp protein_coding protein_coding MGP_NODShiLtJ_T0036518.1 MGP_NODShiLtJ_G0020311.1 mouse_genomes_project 13 39365114 39420648 + MGP_NODShiLtJ_P0036518 Dsp protein_coding protein_coding MGP_NODShiLtJ_T0036519.1 MGP_NODShiLtJ_G0020311.1 mouse_genomes_project 13 39399412 39403280 + Dsp protein_coding processed_transcript MGP_NODShiLtJ_T0009850.1 MGP_NODShiLtJ_G0007983.1 mouse_genomes_project 13 61034332 61034408 - Mir874 miRNA miRNA MGP_NODShiLtJ_T0101622.1 MGP_NODShiLtJ_G0039791.1 mouse_genomes_project 13 22452875 22453767 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100070.1 MGP_NODShiLtJ_G0038464.1 mouse_genomes_project 13 80414345 80414475 + Gm24163 snoRNA snoRNA MGP_NODShiLtJ_T0037145.1 MGP_NODShiLtJ_G0020513.1 mouse_genomes_project 13 67674712 67708442 - MGP_NODShiLtJ_P0037145 Slc35d2 protein_coding protein_coding MGP_NODShiLtJ_T0101641.1 MGP_NODShiLtJ_G0039810.1 mouse_genomes_project 13 34553688 34554570 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036035.1 MGP_NODShiLtJ_G0020075.1 mouse_genomes_project 13 9220691 9806790 - MGP_NODShiLtJ_P0036035 Ryr2 protein_coding protein_coding MGP_NODShiLtJ_T0036036.1 MGP_NODShiLtJ_G0020075.1 mouse_genomes_project 13 9220691 9806790 - MGP_NODShiLtJ_P0036036 Ryr2 protein_coding protein_coding MGP_NODShiLtJ_T0036037.1 MGP_NODShiLtJ_G0020075.1 mouse_genomes_project 13 9223260 9806291 - MGP_NODShiLtJ_P0036037 Ryr2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100043.1 MGP_NODShiLtJ_G0038437.1 mouse_genomes_project 13 6369661 6369794 + Gm23923 snoRNA snoRNA MGP_NODShiLtJ_T0036178.1 MGP_NODShiLtJ_G0020136.1 mouse_genomes_project 13 20631037 20634712 - MGP_NODShiLtJ_P0036178 Olfr11 protein_coding protein_coding MGP_NODShiLtJ_T0036179.1 MGP_NODShiLtJ_G0020136.1 mouse_genomes_project 13 20631037 20631979 - MGP_NODShiLtJ_P0036179 Olfr11 protein_coding protein_coding MGP_NODShiLtJ_T0012772.1 MGP_NODShiLtJ_G0010880.1 mouse_genomes_project 13 22614006 22614154 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036174.1 MGP_NODShiLtJ_G0020133.1 mouse_genomes_project 13 20547225 20548169 - MGP_NODShiLtJ_P0036174 Olfr1535 protein_coding protein_coding MGP_NODShiLtJ_T0037679.1 MGP_NODShiLtJ_G0020710.1 mouse_genomes_project 13 108409549 108473634 + MGP_NODShiLtJ_P0037679 Zfp366 protein_coding protein_coding MGP_NODShiLtJ_T0003390.1 MGP_NODShiLtJ_G0003107.1 mouse_genomes_project 13 30143576 30145555 + Gm11365 antisense antisense MGP_NODShiLtJ_T0037797.1 MGP_NODShiLtJ_G0020742.1 mouse_genomes_project 13 113932558 113960897 - MGP_NODShiLtJ_P0037797 Ppwd1 protein_coding protein_coding MGP_NODShiLtJ_T0036783.1 MGP_NODShiLtJ_G0020406.1 mouse_genomes_project 13 56823960 56855662 + MGP_NODShiLtJ_P0036783 Hrh2 protein_coding protein_coding MGP_NODShiLtJ_T0037336.1 MGP_NODShiLtJ_G0020605.1 mouse_genomes_project 13 78630807 78654516 - MGP_NODShiLtJ_P0037336 Zfp72 protein_coding protein_coding MGP_NODShiLtJ_T0101605.1 MGP_NODShiLtJ_G0039774.1 mouse_genomes_project 13 21588984 21592956 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037952.1 MGP_NODShiLtJ_G0020799.1 mouse_genomes_project 13 128747979 128750339 - MGP_NODShiLtJ_P0037952 Gm17509 protein_coding protein_coding MGP_NODShiLtJ_T0036981.1 MGP_NODShiLtJ_G0020464.1 mouse_genomes_project 13 59654345 59793314 - MGP_NODShiLtJ_P0036981 Trpc7 protein_coding protein_coding MGP_NODShiLtJ_T0036982.1 MGP_NODShiLtJ_G0020464.1 mouse_genomes_project 13 59654345 59793275 - MGP_NODShiLtJ_P0036982 Trpc7 protein_coding protein_coding MGP_NODShiLtJ_T0036983.1 MGP_NODShiLtJ_G0020464.1 mouse_genomes_project 13 59654500 59793327 - MGP_NODShiLtJ_P0036983 Trpc7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036984.1 MGP_NODShiLtJ_G0020464.1 mouse_genomes_project 13 59654998 59793032 - MGP_NODShiLtJ_P0036984 Trpc7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036985.1 MGP_NODShiLtJ_G0020464.1 mouse_genomes_project 13 59654998 59793032 - MGP_NODShiLtJ_P0036985 Trpc7 protein_coding protein_coding MGP_NODShiLtJ_T0036986.1 MGP_NODShiLtJ_G0020464.1 mouse_genomes_project 13 59654998 59793032 - MGP_NODShiLtJ_P0036986 Trpc7 protein_coding protein_coding MGP_NODShiLtJ_T0036987.1 MGP_NODShiLtJ_G0020464.1 mouse_genomes_project 13 59654998 59793032 - MGP_NODShiLtJ_P0036987 Trpc7 protein_coding protein_coding MGP_NODShiLtJ_T0036988.1 MGP_NODShiLtJ_G0020464.1 mouse_genomes_project 13 59654998 59793032 - MGP_NODShiLtJ_P0036988 Trpc7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037224.1 MGP_NODShiLtJ_G0020555.1 mouse_genomes_project 13 71408459 71423444 - MGP_NODShiLtJ_P0037224 Zfp748 protein_coding protein_coding MGP_NODShiLtJ_T0037225.1 MGP_NODShiLtJ_G0020555.1 mouse_genomes_project 13 71415288 71423444 - MGP_NODShiLtJ_P0037225 Zfp748 protein_coding protein_coding MGP_NODShiLtJ_T0037404.1 MGP_NODShiLtJ_G0020628.1 mouse_genomes_project 13 87300127 87344010 + MGP_NODShiLtJ_P0037404 Mblac2 protein_coding protein_coding MGP_NODShiLtJ_T0009838.1 MGP_NODShiLtJ_G0007971.1 mouse_genomes_project 13 42299232 42299304 + Mir5124a miRNA miRNA MGP_NODShiLtJ_T0036221.1 MGP_NODShiLtJ_G0020167.1 mouse_genomes_project 13 21432652 21433555 + MGP_NODShiLtJ_P0036221 Vmn1r198 protein_coding protein_coding MGP_NODShiLtJ_T0098826.1 MGP_NODShiLtJ_G0037220.1 mouse_genomes_project 13 126209280 126209387 + Gm25985 snRNA snRNA MGP_NODShiLtJ_T0036699.1 MGP_NODShiLtJ_G0020379.1 mouse_genomes_project 13 51794990 51810712 + MGP_NODShiLtJ_P0036699 Omd protein_coding protein_coding MGP_NODShiLtJ_T0006454.1 MGP_NODShiLtJ_G0005351.1 mouse_genomes_project 13 22589600 22630912 - 4930557F10Rik lincRNA lincRNA MGP_NODShiLtJ_T0036955.1 MGP_NODShiLtJ_G0020453.1 mouse_genomes_project 13 58903643 58966737 - MGP_NODShiLtJ_P0036955 H2afy protein_coding protein_coding MGP_NODShiLtJ_T0036956.1 MGP_NODShiLtJ_G0020453.1 mouse_genomes_project 13 58903643 58966737 - MGP_NODShiLtJ_P0036956 H2afy protein_coding protein_coding MGP_NODShiLtJ_T0036957.1 MGP_NODShiLtJ_G0020453.1 mouse_genomes_project 13 58904193 58914573 - H2afy protein_coding retained_intron MGP_NODShiLtJ_T0036958.1 MGP_NODShiLtJ_G0020453.1 mouse_genomes_project 13 58904386 58920122 - H2afy protein_coding retained_intron MGP_NODShiLtJ_T0036959.1 MGP_NODShiLtJ_G0020453.1 mouse_genomes_project 13 58925619 58966636 - H2afy protein_coding processed_transcript MGP_NODShiLtJ_T0036960.1 MGP_NODShiLtJ_G0020453.1 mouse_genomes_project 13 58932065 58966546 - H2afy protein_coding retained_intron MGP_NODShiLtJ_T0036961.1 MGP_NODShiLtJ_G0020453.1 mouse_genomes_project 13 58935606 58967469 - H2afy protein_coding processed_transcript MGP_NODShiLtJ_T0036962.1 MGP_NODShiLtJ_G0020453.1 mouse_genomes_project 13 58935617 58965931 - H2afy protein_coding processed_transcript MGP_NODShiLtJ_T0101609.1 MGP_NODShiLtJ_G0039778.1 mouse_genomes_project 13 21757395 21877519 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036417.1 MGP_NODShiLtJ_G0020270.1 mouse_genomes_project 13 33339041 33349160 - MGP_NODShiLtJ_P0036417 Serpinb1a protein_coding protein_coding MGP_NODShiLtJ_T0036418.1 MGP_NODShiLtJ_G0020270.1 mouse_genomes_project 13 33339042 33349160 - MGP_NODShiLtJ_P0036418 Serpinb1a protein_coding protein_coding MGP_NODShiLtJ_T0002539.1 MGP_NODShiLtJ_G0002439.1 mouse_genomes_project 13 17960704 17961152 + MGP_NODShiLtJ_P0002539 Tcrg-V5 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002540.1 MGP_NODShiLtJ_G0002439.1 mouse_genomes_project 13 17960859 17961152 + MGP_NODShiLtJ_P0002540 Tcrg-V5 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0012805.1 MGP_NODShiLtJ_G0010913.1 mouse_genomes_project 13 57559873 57560129 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037802.1 MGP_NODShiLtJ_G0020745.1 mouse_genomes_project 13 114479858 114675296 - MGP_NODShiLtJ_P0037802 Cwc27 protein_coding protein_coding MGP_NODShiLtJ_T0037803.1 MGP_NODShiLtJ_G0020745.1 mouse_genomes_project 13 114603196 114649088 - Cwc27 protein_coding processed_transcript MGP_NODShiLtJ_T0037804.1 MGP_NODShiLtJ_G0020745.1 mouse_genomes_project 13 114646872 114649123 - Cwc27 protein_coding processed_transcript MGP_NODShiLtJ_T0037805.1 MGP_NODShiLtJ_G0020745.1 mouse_genomes_project 13 114664858 114675485 - MGP_NODShiLtJ_P0037805 Cwc27 protein_coding protein_coding MGP_NODShiLtJ_T0035939.1 MGP_NODShiLtJ_G0020052.1 mouse_genomes_project 13 820869 838289 + MGP_NODShiLtJ_P0035939 Akr1c13 protein_coding protein_coding MGP_NODShiLtJ_T0037160.1 MGP_NODShiLtJ_G0020522.1 mouse_genomes_project 13 68561330 68568213 + MGP_NODShiLtJ_P0037160 Spata31 protein_coding protein_coding MGP_NODShiLtJ_T0036342.1 MGP_NODShiLtJ_G0020229.1 mouse_genomes_project 13 24485159 24645735 + MGP_NODShiLtJ_P0036342 Dcdc2a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036343.1 MGP_NODShiLtJ_G0020229.1 mouse_genomes_project 13 24485796 24557771 + MGP_NODShiLtJ_P0036343 Dcdc2a protein_coding protein_coding MGP_NODShiLtJ_T0036344.1 MGP_NODShiLtJ_G0020229.1 mouse_genomes_project 13 24530465 24555637 + Dcdc2a protein_coding processed_transcript MGP_NODShiLtJ_T0036345.1 MGP_NODShiLtJ_G0020229.1 mouse_genomes_project 13 24625789 24645297 + Dcdc2a protein_coding processed_transcript MGP_NODShiLtJ_T0037308.1 MGP_NODShiLtJ_G0020596.1 mouse_genomes_project 13 78244102 78266028 + Tppp protein_coding processed_transcript MGP_NODShiLtJ_T0037309.1 MGP_NODShiLtJ_G0020596.1 mouse_genomes_project 13 78244114 78270409 + MGP_NODShiLtJ_P0037309 Tppp protein_coding protein_coding MGP_NODShiLtJ_T0037310.1 MGP_NODShiLtJ_G0020596.1 mouse_genomes_project 13 78244128 78256094 + Tppp protein_coding retained_intron MGP_NODShiLtJ_T0037311.1 MGP_NODShiLtJ_G0020596.1 mouse_genomes_project 13 78265406 78268256 + Tppp protein_coding processed_transcript MGP_NODShiLtJ_T0101597.1 MGP_NODShiLtJ_G0039766.1 mouse_genomes_project 13 21126524 21127040 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100081.1 MGP_NODShiLtJ_G0038475.1 mouse_genomes_project 13 108949934 108950065 - Gm24471 snoRNA snoRNA MGP_NODShiLtJ_T0037373.1 MGP_NODShiLtJ_G0020623.1 mouse_genomes_project 13 82947999 82961405 - MGP_NODShiLtJ_P0037373 Nr2f1 protein_coding protein_coding MGP_NODShiLtJ_T0037374.1 MGP_NODShiLtJ_G0020623.1 mouse_genomes_project 13 82948178 82956067 - MGP_NODShiLtJ_P0037374 Nr2f1 protein_coding protein_coding MGP_NODShiLtJ_T0037375.1 MGP_NODShiLtJ_G0020623.1 mouse_genomes_project 13 82948690 82956961 - MGP_NODShiLtJ_P0037375 Nr2f1 protein_coding protein_coding MGP_NODShiLtJ_T0037376.1 MGP_NODShiLtJ_G0020623.1 mouse_genomes_project 13 82948751 82955396 - MGP_NODShiLtJ_P0037376 Nr2f1 protein_coding protein_coding MGP_NODShiLtJ_T0037377.1 MGP_NODShiLtJ_G0020623.1 mouse_genomes_project 13 82948890 82949462 - Nr2f1 protein_coding processed_transcript MGP_NODShiLtJ_T0101056.1 MGP_NODShiLtJ_G0039421.1 mouse_genomes_project 13 112802000 112807191 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0012824.1 MGP_NODShiLtJ_G0010932.1 mouse_genomes_project 13 83149574 83150565 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037835.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562254 118601429 + MGP_NODShiLtJ_P0037835 Ercc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037836.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562261 118567188 + Ercc8 protein_coding retained_intron MGP_NODShiLtJ_T0037837.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562261 118577984 + MGP_NODShiLtJ_P0037837 Ercc8 protein_coding protein_coding MGP_NODShiLtJ_T0037838.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562261 118601050 + MGP_NODShiLtJ_P0037838 Ercc8 protein_coding protein_coding MGP_NODShiLtJ_T0037839.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562261 118580631 + MGP_NODShiLtJ_P0037839 Ercc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037840.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562277 118601050 + MGP_NODShiLtJ_P0037840 Ercc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037841.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562294 118601042 + MGP_NODShiLtJ_P0037841 Ercc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037842.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562298 118576488 + MGP_NODShiLtJ_P0037842 Ercc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037843.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562326 118588214 + MGP_NODShiLtJ_P0037843 Ercc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037844.1 MGP_NODShiLtJ_G0020759.1 mouse_genomes_project 13 118562327 118582047 + MGP_NODShiLtJ_P0037844 Ercc8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009864.1 MGP_NODShiLtJ_G0007997.1 mouse_genomes_project 13 89869969 89870041 + Mir9-2 miRNA miRNA MGP_NODShiLtJ_T0006509.1 MGP_NODShiLtJ_G0005391.1 mouse_genomes_project 13 51136530 51141307 + Fam120aos lincRNA lincRNA MGP_NODShiLtJ_T0006581.1 MGP_NODShiLtJ_G0005441.1 mouse_genomes_project 13 122785024 122794354 + lincRNA lincRNA MGP_NODShiLtJ_T0036054.1 MGP_NODShiLtJ_G0020084.1 mouse_genomes_project 13 11271498 11271726 + MGP_NODShiLtJ_P0036054 Gm2399 protein_coding protein_coding MGP_NODShiLtJ_T0036168.1 MGP_NODShiLtJ_G0020130.1 mouse_genomes_project 13 20505468 20523392 - MGP_NODShiLtJ_P0036168 Zkscan8 protein_coding protein_coding MGP_NODShiLtJ_T0036169.1 MGP_NODShiLtJ_G0020130.1 mouse_genomes_project 13 20514077 20523304 - MGP_NODShiLtJ_P0036169 Zkscan8 protein_coding protein_coding MGP_NODShiLtJ_T0036170.1 MGP_NODShiLtJ_G0020130.1 mouse_genomes_project 13 20518695 20523345 - MGP_NODShiLtJ_P0036170 Zkscan8 protein_coding protein_coding MGP_NODShiLtJ_T0036094.1 MGP_NODShiLtJ_G0020097.1 mouse_genomes_project 13 14342808 14360328 + MGP_NODShiLtJ_P0036094 Inhba protein_coding protein_coding MGP_NODShiLtJ_T0036095.1 MGP_NODShiLtJ_G0020097.1 mouse_genomes_project 13 14345432 14360351 + MGP_NODShiLtJ_P0036095 Inhba protein_coding protein_coding MGP_NODShiLtJ_T0009844.1 MGP_NODShiLtJ_G0007977.1 mouse_genomes_project 13 52960486 52960595 - Mir683-2 miRNA miRNA MGP_NODShiLtJ_T0006441.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42846 52842 + lincRNA lincRNA MGP_NODShiLtJ_T0006442.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42850 51852 + lincRNA lincRNA MGP_NODShiLtJ_T0006443.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42859 55406 + lincRNA lincRNA MGP_NODShiLtJ_T0006444.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42862 56652 + lincRNA lincRNA MGP_NODShiLtJ_T0006445.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42871 55930 + lincRNA lincRNA MGP_NODShiLtJ_T0006446.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42878 52063 + lincRNA lincRNA MGP_NODShiLtJ_T0006447.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42893 52414 + lincRNA lincRNA MGP_NODShiLtJ_T0006448.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42919 61541 + lincRNA lincRNA MGP_NODShiLtJ_T0006449.1 MGP_NODShiLtJ_G0005347.1 mouse_genomes_project 13 42920 56632 + lincRNA lincRNA MGP_NODShiLtJ_T0006539.1 MGP_NODShiLtJ_G0005411.1 mouse_genomes_project 13 85148312 85390983 - lincRNA lincRNA MGP_NODShiLtJ_T0037286.1 MGP_NODShiLtJ_G0020585.1 mouse_genomes_project 13 77739872 77783767 + MGP_NODShiLtJ_P0037286 Slc6a3 protein_coding protein_coding MGP_NODShiLtJ_T0037921.1 MGP_NODShiLtJ_G0020785.1 mouse_genomes_project 13 124089277 124146946 - MGP_NODShiLtJ_P0037921 Gzmk protein_coding protein_coding MGP_NODShiLtJ_T0037922.1 MGP_NODShiLtJ_G0020785.1 mouse_genomes_project 13 124089307 124100245 - MGP_NODShiLtJ_P0037922 Gzmk protein_coding protein_coding MGP_NODShiLtJ_T0037923.1 MGP_NODShiLtJ_G0020785.1 mouse_genomes_project 13 124089461 124100269 - MGP_NODShiLtJ_P0037923 Gzmk protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037365.1 MGP_NODShiLtJ_G0020619.1 mouse_genomes_project 13 81677703 81787420 - MGP_NODShiLtJ_P0037365 protein_coding protein_coding MGP_NODShiLtJ_T0037366.1 MGP_NODShiLtJ_G0020619.1 mouse_genomes_project 13 81678617 81685740 - protein_coding retained_intron MGP_NODShiLtJ_T0037367.1 MGP_NODShiLtJ_G0020619.1 mouse_genomes_project 13 81751812 81787385 - MGP_NODShiLtJ_P0037367 protein_coding protein_coding MGP_NODShiLtJ_T0037368.1 MGP_NODShiLtJ_G0020619.1 mouse_genomes_project 13 81752127 81787041 - MGP_NODShiLtJ_P0037368 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098824.1 MGP_NODShiLtJ_G0037218.1 mouse_genomes_project 13 117055851 117055958 - Gm24527 snRNA snRNA MGP_NODShiLtJ_T0003378.1 MGP_NODShiLtJ_G0003097.1 mouse_genomes_project 13 17926892 17961985 - Gm43385 antisense antisense MGP_NODShiLtJ_T0036264.1 MGP_NODShiLtJ_G0020202.1 mouse_genomes_project 13 23071530 23077880 - MGP_NODShiLtJ_P0036264 Hfe protein_coding protein_coding MGP_NODShiLtJ_T0036265.1 MGP_NODShiLtJ_G0020202.1 mouse_genomes_project 13 23071530 23077880 - MGP_NODShiLtJ_P0036265 Hfe protein_coding protein_coding MGP_NODShiLtJ_T0036266.1 MGP_NODShiLtJ_G0020202.1 mouse_genomes_project 13 23071530 23077880 - MGP_NODShiLtJ_P0036266 Hfe protein_coding protein_coding MGP_NODShiLtJ_T0037539.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101884611 101996246 + MGP_NODShiLtJ_P0037539 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037540.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101884956 101971184 + MGP_NODShiLtJ_P0037540 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037541.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101885349 101961869 + MGP_NODShiLtJ_P0037541 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037542.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101885653 102017568 + MGP_NODShiLtJ_P0037542 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037543.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101885957 102016157 + MGP_NODShiLtJ_P0037543 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037544.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101885957 102016157 + MGP_NODShiLtJ_P0037544 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037545.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101886013 102017677 + MGP_NODShiLtJ_P0037545 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037546.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101886038 101970456 + MGP_NODShiLtJ_P0037546 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037547.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101886132 102016193 + MGP_NODShiLtJ_P0037547 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037548.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101886132 102016193 + MGP_NODShiLtJ_P0037548 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037549.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101888909 102018016 + MGP_NODShiLtJ_P0037549 Homer1 protein_coding protein_coding MGP_NODShiLtJ_T0037550.1 MGP_NODShiLtJ_G0020661.1 mouse_genomes_project 13 101992885 102016116 + MGP_NODShiLtJ_P0037550 Homer1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037268.1 MGP_NODShiLtJ_G0020578.1 mouse_genomes_project 13 74892046 74893602 + MGP_NODShiLtJ_P0037268 8030423J24Rik protein_coding protein_coding MGP_NODShiLtJ_T0036372.1 MGP_NODShiLtJ_G0020248.1 mouse_genomes_project 13 27699751 27708309 - MGP_NODShiLtJ_P0036372 Prl7d1 protein_coding protein_coding MGP_NODShiLtJ_T0098816.1 MGP_NODShiLtJ_G0037210.1 mouse_genomes_project 13 67882156 67882244 - Gm25654 snRNA snRNA MGP_NODShiLtJ_T0017234.1 MGP_NODShiLtJ_G0015126.1 mouse_genomes_project 13 42405776 42452805 - A730081D07Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0036615.1 MGP_NODShiLtJ_G0020349.1 mouse_genomes_project 13 47365769 47829242 - MGP_NODShiLtJ_P0036615 Atxn1 protein_coding protein_coding MGP_NODShiLtJ_T0036616.1 MGP_NODShiLtJ_G0020349.1 mouse_genomes_project 13 47365769 47829242 - MGP_NODShiLtJ_P0036616 Atxn1 protein_coding protein_coding MGP_NODShiLtJ_T0036617.1 MGP_NODShiLtJ_G0020349.1 mouse_genomes_project 13 47365769 47829242 - MGP_NODShiLtJ_P0036617 Atxn1 protein_coding protein_coding MGP_NODShiLtJ_T0006564.1 MGP_NODShiLtJ_G0005426.1 mouse_genomes_project 13 107562501 107576593 - 2310005E17Rik lincRNA lincRNA MGP_NODShiLtJ_T0017235.1 MGP_NODShiLtJ_G0015127.1 mouse_genomes_project 13 62897518 62899493 + Etohd2 processed_transcript processed_transcript MGP_NODShiLtJ_T0017236.1 MGP_NODShiLtJ_G0015127.1 mouse_genomes_project 13 62897519 62901234 + Etohd2 processed_transcript processed_transcript MGP_NODShiLtJ_T0036814.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57300306 57345281 + MGP_NODShiLtJ_P0036814 Faf2 protein_coding protein_coding MGP_NODShiLtJ_T0036815.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57300326 57322138 + MGP_NODShiLtJ_P0036815 Faf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036816.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57300346 57342777 + MGP_NODShiLtJ_P0036816 Faf2 protein_coding protein_coding MGP_NODShiLtJ_T0036817.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57300357 57329023 + MGP_NODShiLtJ_P0036817 Faf2 protein_coding protein_coding MGP_NODShiLtJ_T0036818.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57300357 57328912 + MGP_NODShiLtJ_P0036818 Faf2 protein_coding protein_coding MGP_NODShiLtJ_T0036819.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57300360 57336959 + MGP_NODShiLtJ_P0036819 Faf2 protein_coding protein_coding MGP_NODShiLtJ_T0036820.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57300363 57345277 + MGP_NODShiLtJ_P0036820 Faf2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036821.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57322140 57336117 + MGP_NODShiLtJ_P0036821 Faf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036822.1 MGP_NODShiLtJ_G0020415.1 mouse_genomes_project 13 57332036 57336142 + Faf2 protein_coding retained_intron MGP_NODShiLtJ_T0002535.1 MGP_NODShiLtJ_G0002436.1 mouse_genomes_project 13 17943308 17943777 + MGP_NODShiLtJ_P0002535 Tcrg-V7 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0006528.1 MGP_NODShiLtJ_G0005402.1 mouse_genomes_project 13 62859512 62862209 + 4930528D03Rik lincRNA lincRNA MGP_NODShiLtJ_T0036527.1 MGP_NODShiLtJ_G0020316.1 mouse_genomes_project 13 40211043 40240352 - MGP_NODShiLtJ_P0036527 Slc35b3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036528.1 MGP_NODShiLtJ_G0020316.1 mouse_genomes_project 13 40211051 40240332 - MGP_NODShiLtJ_P0036528 Slc35b3 protein_coding protein_coding MGP_NODShiLtJ_T0036529.1 MGP_NODShiLtJ_G0020316.1 mouse_genomes_project 13 40211051 40240670 - MGP_NODShiLtJ_P0036529 Slc35b3 protein_coding protein_coding MGP_NODShiLtJ_T0012822.1 MGP_NODShiLtJ_G0010930.1 mouse_genomes_project 13 81311104 81312397 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036496.1 MGP_NODShiLtJ_G0020303.1 mouse_genomes_project 13 37260834 37612606 + MGP_NODShiLtJ_P0036496 Fars2 protein_coding protein_coding MGP_NODShiLtJ_T0036110.1 MGP_NODShiLtJ_G0020106.1 mouse_genomes_project 13 17696142 17915768 + MGP_NODShiLtJ_P0036110 Amph protein_coding protein_coding MGP_NODShiLtJ_T0036111.1 MGP_NODShiLtJ_G0020106.1 mouse_genomes_project 13 17696162 17915771 + MGP_NODShiLtJ_P0036111 Amph protein_coding protein_coding MGP_NODShiLtJ_T0036112.1 MGP_NODShiLtJ_G0020106.1 mouse_genomes_project 13 17696189 17859151 + Amph protein_coding retained_intron MGP_NODShiLtJ_T0036113.1 MGP_NODShiLtJ_G0020106.1 mouse_genomes_project 13 17881583 17883490 + Amph protein_coding retained_intron MGP_NODShiLtJ_T0036114.1 MGP_NODShiLtJ_G0020106.1 mouse_genomes_project 13 17883254 17906101 + Amph protein_coding processed_transcript MGP_NODShiLtJ_T0012798.1 MGP_NODShiLtJ_G0010906.1 mouse_genomes_project 13 34311449 34311796 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011249.1 MGP_NODShiLtJ_G0009382.1 mouse_genomes_project 13 100199558 100199866 - Gm24597 misc_RNA misc_RNA MGP_NODShiLtJ_T0036526.1 MGP_NODShiLtJ_G0020315.1 mouse_genomes_project 13 39855412 39895084 - MGP_NODShiLtJ_P0036526 Bloc1s5 protein_coding protein_coding MGP_NODShiLtJ_T0036937.1 MGP_NODShiLtJ_G0020445.1 mouse_genomes_project 13 58393421 58403974 + MGP_NODShiLtJ_P0036937 B4galt7 protein_coding protein_coding MGP_NODShiLtJ_T0036938.1 MGP_NODShiLtJ_G0020445.1 mouse_genomes_project 13 58393590 58401544 + B4galt7 protein_coding retained_intron MGP_NODShiLtJ_T0036939.1 MGP_NODShiLtJ_G0020445.1 mouse_genomes_project 13 58393590 58402328 + MGP_NODShiLtJ_P0036939 B4galt7 protein_coding protein_coding MGP_NODShiLtJ_T0036940.1 MGP_NODShiLtJ_G0020445.1 mouse_genomes_project 13 58393590 58403973 + MGP_NODShiLtJ_P0036940 B4galt7 protein_coding protein_coding MGP_NODShiLtJ_T0037146.1 MGP_NODShiLtJ_G0020514.1 mouse_genomes_project 13 67714386 67734213 - MGP_NODShiLtJ_P0037146 Zfp367 protein_coding protein_coding MGP_NODShiLtJ_T0037147.1 MGP_NODShiLtJ_G0020514.1 mouse_genomes_project 13 67716767 67733440 - Zfp367 protein_coding processed_transcript MGP_NODShiLtJ_T0037148.1 MGP_NODShiLtJ_G0020514.1 mouse_genomes_project 13 67716894 67731225 - Zfp367 protein_coding processed_transcript MGP_NODShiLtJ_T0037149.1 MGP_NODShiLtJ_G0020514.1 mouse_genomes_project 13 67721838 67734213 - MGP_NODShiLtJ_P0037149 Zfp367 protein_coding protein_coding MGP_NODShiLtJ_T0101279.1 MGP_NODShiLtJ_G0039553.1 mouse_genomes_project 13 22973628 22973948 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0012787.1 MGP_NODShiLtJ_G0010895.1 mouse_genomes_project 13 27129733 27130687 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098805.1 MGP_NODShiLtJ_G0037199.1 mouse_genomes_project 13 41198858 41199023 - Gm23972 snRNA snRNA MGP_NODShiLtJ_T0036860.1 MGP_NODShiLtJ_G0020422.1 mouse_genomes_project 13 57678253 57736984 + MGP_NODShiLtJ_P0036860 Unc5a protein_coding protein_coding MGP_NODShiLtJ_T0036861.1 MGP_NODShiLtJ_G0020422.1 mouse_genomes_project 13 57678253 57736984 + MGP_NODShiLtJ_P0036861 Unc5a protein_coding protein_coding MGP_NODShiLtJ_T0036862.1 MGP_NODShiLtJ_G0020422.1 mouse_genomes_project 13 57727507 57730751 + MGP_NODShiLtJ_P0036862 Unc5a protein_coding protein_coding MGP_NODShiLtJ_T0036863.1 MGP_NODShiLtJ_G0020422.1 mouse_genomes_project 13 57733975 57735619 + Unc5a protein_coding retained_intron MGP_NODShiLtJ_T0036864.1 MGP_NODShiLtJ_G0020422.1 mouse_genomes_project 13 57734645 57736452 + MGP_NODShiLtJ_P0036864 Unc5a protein_coding protein_coding MGP_NODShiLtJ_T0036101.1 MGP_NODShiLtJ_G0020103.1 mouse_genomes_project 13 16626209 16634900 - MGP_NODShiLtJ_P0036101 Yae1d1 protein_coding protein_coding MGP_NODShiLtJ_T0003452.1 MGP_NODShiLtJ_G0003143.1 mouse_genomes_project 13 114535523 114545742 + 2610204G07Rik antisense antisense MGP_NODShiLtJ_T0012811.1 MGP_NODShiLtJ_G0010919.1 mouse_genomes_project 13 71327177 71327877 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036251.1 MGP_NODShiLtJ_G0020191.1 mouse_genomes_project 13 22862529 22864307 + MGP_NODShiLtJ_P0036251 Hist1h4h protein_coding protein_coding MGP_NODShiLtJ_T0006530.1 MGP_NODShiLtJ_G0005404.1 mouse_genomes_project 13 71423539 71432477 + 9430065F17Rik lincRNA lincRNA MGP_NODShiLtJ_T0006531.1 MGP_NODShiLtJ_G0005404.1 mouse_genomes_project 13 71423568 71435336 + 9430065F17Rik lincRNA lincRNA MGP_NODShiLtJ_T0012797.1 MGP_NODShiLtJ_G0010905.1 mouse_genomes_project 13 33656962 33657769 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100050.1 MGP_NODShiLtJ_G0038444.1 mouse_genomes_project 13 23724760 23724883 - Gm23340 snoRNA snoRNA MGP_NODShiLtJ_T0035923.1 MGP_NODShiLtJ_G0020042.1 mouse_genomes_project 13 140954 191053 - MGP_NODShiLtJ_P0035923 Fam208b protein_coding protein_coding MGP_NODShiLtJ_T0037635.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116769 106159743 + MGP_NODShiLtJ_P0037635 Gfm2 protein_coding protein_coding MGP_NODShiLtJ_T0037636.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116769 106138238 + MGP_NODShiLtJ_P0037636 Gfm2 protein_coding protein_coding MGP_NODShiLtJ_T0037637.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116809 106157935 + Gfm2 protein_coding retained_intron MGP_NODShiLtJ_T0037638.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116810 106159753 + MGP_NODShiLtJ_P0037638 Gfm2 protein_coding protein_coding MGP_NODShiLtJ_T0037639.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116817 106151856 + MGP_NODShiLtJ_P0037639 Gfm2 protein_coding protein_coding MGP_NODShiLtJ_T0037640.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116830 106124433 + Gfm2 protein_coding retained_intron MGP_NODShiLtJ_T0037641.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116834 106164497 + MGP_NODShiLtJ_P0037641 Gfm2 protein_coding protein_coding MGP_NODShiLtJ_T0037642.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116840 106129070 + MGP_NODShiLtJ_P0037642 Gfm2 protein_coding protein_coding MGP_NODShiLtJ_T0037643.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106116872 106159753 + MGP_NODShiLtJ_P0037643 Gfm2 protein_coding protein_coding MGP_NODShiLtJ_T0037644.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106133110 106145640 + MGP_NODShiLtJ_P0037644 Gfm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037645.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106143316 106159753 + Gfm2 protein_coding retained_intron MGP_NODShiLtJ_T0037646.1 MGP_NODShiLtJ_G0020695.1 mouse_genomes_project 13 106154750 106160788 + Gfm2 protein_coding retained_intron MGP_NODShiLtJ_T0097761.1 MGP_NODShiLtJ_G0036173.1 mouse_genomes_project 13 99597301 99597728 + pseudogene pseudogene MGP_NODShiLtJ_T0006488.1 MGP_NODShiLtJ_G0005375.1 mouse_genomes_project 13 38587585 38590032 - Gm4035 lincRNA lincRNA MGP_NODShiLtJ_T0006489.1 MGP_NODShiLtJ_G0005375.1 mouse_genomes_project 13 38587697 38604046 - Gm4035 lincRNA lincRNA MGP_NODShiLtJ_T0036398.1 MGP_NODShiLtJ_G0020258.1 mouse_genomes_project 13 31022240 31039934 + MGP_NODShiLtJ_P0036398 Irf4 protein_coding protein_coding MGP_NODShiLtJ_T0036399.1 MGP_NODShiLtJ_G0020258.1 mouse_genomes_project 13 31022240 31039934 + MGP_NODShiLtJ_P0036399 Irf4 protein_coding protein_coding MGP_NODShiLtJ_T0037004.1 MGP_NODShiLtJ_G0020472.1 mouse_genomes_project 13 61412660 61417095 - MGP_NODShiLtJ_P0037004 2210016F16Rik protein_coding protein_coding MGP_NODShiLtJ_T0036102.1 MGP_NODShiLtJ_G0020104.1 mouse_genomes_project 13 16773900 17052570 - MGP_NODShiLtJ_P0036102 Pou6f2 protein_coding protein_coding MGP_NODShiLtJ_T0036103.1 MGP_NODShiLtJ_G0020104.1 mouse_genomes_project 13 16779129 17052570 - MGP_NODShiLtJ_P0036103 Pou6f2 protein_coding protein_coding MGP_NODShiLtJ_T0036104.1 MGP_NODShiLtJ_G0020104.1 mouse_genomes_project 13 16779160 16829290 - MGP_NODShiLtJ_P0036104 Pou6f2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036105.1 MGP_NODShiLtJ_G0020104.1 mouse_genomes_project 13 16779198 17178784 - MGP_NODShiLtJ_P0036105 Pou6f2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036106.1 MGP_NODShiLtJ_G0020104.1 mouse_genomes_project 13 16795816 16845523 - Pou6f2 protein_coding processed_transcript MGP_NODShiLtJ_T0036107.1 MGP_NODShiLtJ_G0020104.1 mouse_genomes_project 13 16795816 16829295 - MGP_NODShiLtJ_P0036107 Pou6f2 protein_coding protein_coding MGP_NODShiLtJ_T0036108.1 MGP_NODShiLtJ_G0020104.1 mouse_genomes_project 13 16805104 17052570 - Pou6f2 protein_coding processed_transcript MGP_NODShiLtJ_T0037873.1 MGP_NODShiLtJ_G0020764.1 mouse_genomes_project 13 120985134 120990868 - MGP_NODShiLtJ_P0037873 Gapt protein_coding protein_coding MGP_NODShiLtJ_T0006565.1 MGP_NODShiLtJ_G0005427.1 mouse_genomes_project 13 107620749 107621611 - Gm29501 lincRNA lincRNA MGP_NODShiLtJ_T0012763.1 MGP_NODShiLtJ_G0010871.1 mouse_genomes_project 13 21007488 21008064 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012834.1 MGP_NODShiLtJ_G0010942.1 mouse_genomes_project 13 102382450 102384160 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003395.1 MGP_NODShiLtJ_G0003110.1 mouse_genomes_project 13 42136143 42144579 + Gm26688 antisense antisense MGP_NODShiLtJ_T0000875.1 MGP_NODShiLtJ_G0000804.1 mouse_genomes_project 13 108892262 108893092 + TEC TEC MGP_NODShiLtJ_T0002437.1 MGP_NODShiLtJ_G0002346.1 mouse_genomes_project 13 18065665 18068298 + MGP_NODShiLtJ_P0002437 TR_C_gene TR_C_gene MGP_NODShiLtJ_T0006554.1 MGP_NODShiLtJ_G0005420.1 mouse_genomes_project 13 102619563 102621589 - Gm26527 lincRNA lincRNA MGP_NODShiLtJ_T0036947.1 MGP_NODShiLtJ_G0020448.1 mouse_genomes_project 13 58496433 58510278 + MGP_NODShiLtJ_P0036947 B230219D22Rik protein_coding protein_coding MGP_NODShiLtJ_T0101612.1 MGP_NODShiLtJ_G0039781.1 mouse_genomes_project 13 21854907 21855980 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036357.1 MGP_NODShiLtJ_G0020238.1 mouse_genomes_project 13 27072820 27087626 + MGP_NODShiLtJ_P0036357 Prl3a1 protein_coding protein_coding MGP_NODShiLtJ_T0036564.1 MGP_NODShiLtJ_G0020334.1 mouse_genomes_project 13 43852074 43858756 + MGP_NODShiLtJ_P0036564 Edn1 protein_coding protein_coding MGP_NODShiLtJ_T0036227.1 MGP_NODShiLtJ_G0020173.1 mouse_genomes_project 13 21715740 21716691 - MGP_NODShiLtJ_P0036227 Vmn1r205 protein_coding protein_coding MGP_NODShiLtJ_T0036513.1 MGP_NODShiLtJ_G0020308.1 mouse_genomes_project 13 39170505 39194438 - MGP_NODShiLtJ_P0036513 Ssr1 protein_coding protein_coding MGP_NODShiLtJ_T0006484.1 MGP_NODShiLtJ_G0005372.1 mouse_genomes_project 13 31942135 31943337 + Gm11378 lincRNA lincRNA MGP_NODShiLtJ_T0006535.1 MGP_NODShiLtJ_G0005408.1 mouse_genomes_project 13 73941422 73965875 - 1700084F23Rik lincRNA lincRNA MGP_NODShiLtJ_T0006536.1 MGP_NODShiLtJ_G0005408.1 mouse_genomes_project 13 73950809 73965359 - 1700084F23Rik lincRNA lincRNA MGP_NODShiLtJ_T0101634.1 MGP_NODShiLtJ_G0039803.1 mouse_genomes_project 13 33640071 33645100 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036291.1 MGP_NODShiLtJ_G0020217.1 mouse_genomes_project 13 23342645 23384919 - MGP_NODShiLtJ_P0036291 Scgn protein_coding protein_coding MGP_NODShiLtJ_T0036292.1 MGP_NODShiLtJ_G0020217.1 mouse_genomes_project 13 23352546 23358229 - Scgn protein_coding processed_transcript MGP_NODShiLtJ_T0037104.1 MGP_NODShiLtJ_G0020508.1 mouse_genomes_project 13 66527268 66814428 + MGP_NODShiLtJ_P0037104 2010111I01Rik protein_coding protein_coding MGP_NODShiLtJ_T0037105.1 MGP_NODShiLtJ_G0020508.1 mouse_genomes_project 13 66527501 66817057 + MGP_NODShiLtJ_P0037105 2010111I01Rik protein_coding protein_coding MGP_NODShiLtJ_T0037106.1 MGP_NODShiLtJ_G0020508.1 mouse_genomes_project 13 66793574 66841064 + MGP_NODShiLtJ_P0037106 2010111I01Rik protein_coding protein_coding MGP_NODShiLtJ_T0036621.1 MGP_NODShiLtJ_G0020353.1 mouse_genomes_project 13 48431763 48581053 + MGP_NODShiLtJ_P0036621 Cap2 protein_coding protein_coding MGP_NODShiLtJ_T0036622.1 MGP_NODShiLtJ_G0020353.1 mouse_genomes_project 13 48570378 48577324 + Cap2 protein_coding processed_transcript MGP_NODShiLtJ_T0037738.1 MGP_NODShiLtJ_G0020731.1 mouse_genomes_project 13 110192987 110201951 - MGP_NODShiLtJ_P0037738 Ccnb1 protein_coding protein_coding MGP_NODShiLtJ_T0037739.1 MGP_NODShiLtJ_G0020731.1 mouse_genomes_project 13 110193069 110201867 - MGP_NODShiLtJ_P0037739 Ccnb1 protein_coding protein_coding MGP_NODShiLtJ_T0037740.1 MGP_NODShiLtJ_G0020731.1 mouse_genomes_project 13 110193084 110196611 - Ccnb1 protein_coding retained_intron MGP_NODShiLtJ_T0037741.1 MGP_NODShiLtJ_G0020731.1 mouse_genomes_project 13 110195168 110197232 - Ccnb1 protein_coding retained_intron MGP_NODShiLtJ_T0037742.1 MGP_NODShiLtJ_G0020731.1 mouse_genomes_project 13 110195922 110201783 - MGP_NODShiLtJ_P0037742 Ccnb1 protein_coding protein_coding MGP_NODShiLtJ_T0037743.1 MGP_NODShiLtJ_G0020731.1 mouse_genomes_project 13 110198424 110200984 - Ccnb1 protein_coding retained_intron MGP_NODShiLtJ_T0037744.1 MGP_NODShiLtJ_G0020731.1 mouse_genomes_project 13 110200917 110201856 - Ccnb1 protein_coding retained_intron MGP_NODShiLtJ_T0012753.1 MGP_NODShiLtJ_G0010861.1 mouse_genomes_project 13 9643395 9644384 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037951.1 MGP_NODShiLtJ_G0020798.1 mouse_genomes_project 13 128336269 128517924 - MGP_NODShiLtJ_P0037951 Parp8 protein_coding protein_coding MGP_NODShiLtJ_T0003447.1 MGP_NODShiLtJ_G0003140.1 mouse_genomes_project 13 109390235 109391561 - BC001981 antisense antisense MGP_NODShiLtJ_T0003448.1 MGP_NODShiLtJ_G0003140.1 mouse_genomes_project 13 109391256 109391559 - BC001981 antisense antisense MGP_NODShiLtJ_T0009847.1 MGP_NODShiLtJ_G0007980.1 mouse_genomes_project 13 58239558 58239624 + Mir6943 miRNA miRNA MGP_NODShiLtJ_T0037207.1 MGP_NODShiLtJ_G0020545.1 mouse_genomes_project 13 71129483 71147582 - MGP_NODShiLtJ_P0037207 Zfp595 protein_coding protein_coding MGP_NODShiLtJ_T0000859.1 MGP_NODShiLtJ_G0000788.1 mouse_genomes_project 13 43376172 43376635 + TEC TEC MGP_NODShiLtJ_T0037345.1 MGP_NODShiLtJ_G0020612.1 mouse_genomes_project 13 80372257 80449749 - MGP_NODShiLtJ_P0037345 Rhobtb3 protein_coding protein_coding MGP_NODShiLtJ_T0037346.1 MGP_NODShiLtJ_G0020612.1 mouse_genomes_project 13 80374772 80389023 - Rhobtb3 protein_coding processed_transcript MGP_NODShiLtJ_T0037347.1 MGP_NODShiLtJ_G0020612.1 mouse_genomes_project 13 80422822 80449807 - MGP_NODShiLtJ_P0037347 Rhobtb3 protein_coding protein_coding MGP_NODShiLtJ_T0037883.1 MGP_NODShiLtJ_G0020769.1 mouse_genomes_project 13 122469050 122495053 + MGP_NODShiLtJ_P0037883 Mier3 protein_coding protein_coding MGP_NODShiLtJ_T0037884.1 MGP_NODShiLtJ_G0020769.1 mouse_genomes_project 13 122469099 122474446 + Mier3 protein_coding retained_intron MGP_NODShiLtJ_T0037885.1 MGP_NODShiLtJ_G0020769.1 mouse_genomes_project 13 122469100 122496011 + MGP_NODShiLtJ_P0037885 Mier3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037886.1 MGP_NODShiLtJ_G0020769.1 mouse_genomes_project 13 122469120 122496020 + MGP_NODShiLtJ_P0037886 Mier3 protein_coding protein_coding MGP_NODShiLtJ_T0036213.1 MGP_NODShiLtJ_G0020159.1 mouse_genomes_project 13 21140542 21141289 - MGP_NODShiLtJ_P0036213 protein_coding protein_coding MGP_NODShiLtJ_T0006541.1 MGP_NODShiLtJ_G0005413.1 mouse_genomes_project 13 86444207 86621718 + 9330111N05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006542.1 MGP_NODShiLtJ_G0005413.1 mouse_genomes_project 13 86445398 86572801 + 9330111N05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006543.1 MGP_NODShiLtJ_G0005413.1 mouse_genomes_project 13 86464557 86624157 + 9330111N05Rik lincRNA lincRNA MGP_NODShiLtJ_T0036252.1 MGP_NODShiLtJ_G0020192.1 mouse_genomes_project 13 22878571 22880641 - MGP_NODShiLtJ_P0036252 protein_coding protein_coding MGP_NODShiLtJ_T0036934.1 MGP_NODShiLtJ_G0020442.1 mouse_genomes_project 13 58319303 58325501 - MGP_NODShiLtJ_P0036934 Ddx41 protein_coding protein_coding MGP_NODShiLtJ_T0037478.1 MGP_NODShiLtJ_G0020640.1 mouse_genomes_project 13 98868484 98868850 + MGP_NODShiLtJ_P0037478 Gm21726 protein_coding protein_coding MGP_NODShiLtJ_T0003443.1 MGP_NODShiLtJ_G0003139.1 mouse_genomes_project 13 107447083 107447966 + Gm9828 antisense antisense MGP_NODShiLtJ_T0003444.1 MGP_NODShiLtJ_G0003139.1 mouse_genomes_project 13 107447730 107453533 + Gm9828 antisense antisense MGP_NODShiLtJ_T0003445.1 MGP_NODShiLtJ_G0003139.1 mouse_genomes_project 13 107447777 107456544 + Gm9828 antisense antisense MGP_NODShiLtJ_T0003446.1 MGP_NODShiLtJ_G0003139.1 mouse_genomes_project 13 107450199 107453039 + Gm9828 antisense antisense MGP_NODShiLtJ_T0037249.1 MGP_NODShiLtJ_G0020570.1 mouse_genomes_project 13 72447746 72854245 - MGP_NODShiLtJ_P0037249 Adcy2 protein_coding protein_coding MGP_NODShiLtJ_T0036229.1 MGP_NODShiLtJ_G0020175.1 mouse_genomes_project 13 21928920 21929919 - MGP_NODShiLtJ_P0036229 Vmn1r208 protein_coding protein_coding MGP_NODShiLtJ_T0006510.1 MGP_NODShiLtJ_G0005392.1 mouse_genomes_project 13 54428064 54431416 + Gm26651 lincRNA lincRNA MGP_NODShiLtJ_T0037536.1 MGP_NODShiLtJ_G0020659.1 mouse_genomes_project 13 101573649 101688482 - MGP_NODShiLtJ_P0037536 Cmya5 protein_coding protein_coding MGP_NODShiLtJ_T0036941.1 MGP_NODShiLtJ_G0020446.1 mouse_genomes_project 13 58416437 58426747 + MGP_NODShiLtJ_P0036941 Caml protein_coding protein_coding MGP_NODShiLtJ_T0036942.1 MGP_NODShiLtJ_G0020446.1 mouse_genomes_project 13 58416630 58418681 + Caml protein_coding retained_intron MGP_NODShiLtJ_T0036943.1 MGP_NODShiLtJ_G0020446.1 mouse_genomes_project 13 58422054 58426747 + Caml protein_coding retained_intron MGP_NODShiLtJ_T0037436.1 MGP_NODShiLtJ_G0020632.1 mouse_genomes_project 13 91540879 91571792 + MGP_NODShiLtJ_P0037436 Ccnh protein_coding protein_coding MGP_NODShiLtJ_T0037437.1 MGP_NODShiLtJ_G0020632.1 mouse_genomes_project 13 91540906 91555146 + MGP_NODShiLtJ_P0037437 Ccnh protein_coding protein_coding MGP_NODShiLtJ_T0037438.1 MGP_NODShiLtJ_G0020632.1 mouse_genomes_project 13 91540919 91569810 + MGP_NODShiLtJ_P0037438 Ccnh protein_coding protein_coding MGP_NODShiLtJ_T0037439.1 MGP_NODShiLtJ_G0020632.1 mouse_genomes_project 13 91540948 91570108 + MGP_NODShiLtJ_P0037439 Ccnh protein_coding protein_coding MGP_NODShiLtJ_T0037440.1 MGP_NODShiLtJ_G0020632.1 mouse_genomes_project 13 91555133 91584471 + MGP_NODShiLtJ_P0037440 Ccnh protein_coding protein_coding MGP_NODShiLtJ_T0037441.1 MGP_NODShiLtJ_G0020632.1 mouse_genomes_project 13 91568520 91570307 + Ccnh protein_coding processed_transcript MGP_NODShiLtJ_T0037442.1 MGP_NODShiLtJ_G0020632.1 mouse_genomes_project 13 91568982 91570103 + Ccnh protein_coding retained_intron MGP_NODShiLtJ_T0037192.1 MGP_NODShiLtJ_G0020537.1 mouse_genomes_project 13 70858243 70873704 - MGP_NODShiLtJ_P0037192 protein_coding protein_coding MGP_NODShiLtJ_T0037196.1 MGP_NODShiLtJ_G0020537.1 mouse_genomes_project 13 70859013 70873647 - MGP_NODShiLtJ_P0037196 protein_coding protein_coding MGP_NODShiLtJ_T0037337.1 MGP_NODShiLtJ_G0020606.1 mouse_genomes_project 13 78796109 78800974 - MGP_NODShiLtJ_P0037337 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036944.1 MGP_NODShiLtJ_G0020447.1 mouse_genomes_project 13 58430563 58479999 + MGP_NODShiLtJ_P0036944 Ddx46 protein_coding protein_coding MGP_NODShiLtJ_T0036945.1 MGP_NODShiLtJ_G0020447.1 mouse_genomes_project 13 58430563 58479999 + MGP_NODShiLtJ_P0036945 Ddx46 protein_coding protein_coding MGP_NODShiLtJ_T0036946.1 MGP_NODShiLtJ_G0020447.1 mouse_genomes_project 13 58430715 58480007 + MGP_NODShiLtJ_P0036946 Ddx46 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036904.1 MGP_NODShiLtJ_G0020434.1 mouse_genomes_project 13 58170246 58185287 + MGP_NODShiLtJ_P0036904 Slc34a1 protein_coding protein_coding MGP_NODShiLtJ_T0037565.1 MGP_NODShiLtJ_G0020668.1 mouse_genomes_project 13 102903041 102988908 - MGP_NODShiLtJ_P0037565 Scamp1 protein_coding protein_coding MGP_NODShiLtJ_T0037566.1 MGP_NODShiLtJ_G0020668.1 mouse_genomes_project 13 102922261 102968728 - MGP_NODShiLtJ_P0037566 Scamp1 protein_coding protein_coding MGP_NODShiLtJ_T0036968.1 MGP_NODShiLtJ_G0020459.1 mouse_genomes_project 13 59342727 59345691 - MGP_NODShiLtJ_P0036968 Il9 protein_coding protein_coding MGP_NODShiLtJ_T0036362.1 MGP_NODShiLtJ_G0020241.1 mouse_genomes_project 13 27231947 27242851 - MGP_NODShiLtJ_P0036362 Prl2b1 protein_coding protein_coding MGP_NODShiLtJ_T0037670.1 MGP_NODShiLtJ_G0020707.1 mouse_genomes_project 13 107915255 108023933 - MGP_NODShiLtJ_P0037670 Fcho2 protein_coding protein_coding MGP_NODShiLtJ_T0037671.1 MGP_NODShiLtJ_G0020707.1 mouse_genomes_project 13 107915255 108023933 - MGP_NODShiLtJ_P0037671 Fcho2 protein_coding protein_coding MGP_NODShiLtJ_T0037672.1 MGP_NODShiLtJ_G0020707.1 mouse_genomes_project 13 107945337 108023933 - MGP_NODShiLtJ_P0037672 Fcho2 protein_coding protein_coding MGP_NODShiLtJ_T0037673.1 MGP_NODShiLtJ_G0020707.1 mouse_genomes_project 13 107948532 108023933 - MGP_NODShiLtJ_P0037673 Fcho2 protein_coding protein_coding MGP_NODShiLtJ_T0101640.1 MGP_NODShiLtJ_G0039809.1 mouse_genomes_project 13 34553688 34554552 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037683.1 MGP_NODShiLtJ_G0020713.1 mouse_genomes_project 13 108662826 108759771 - MGP_NODShiLtJ_P0037683 Map1b protein_coding protein_coding MGP_NODShiLtJ_T0036995.1 MGP_NODShiLtJ_G0020466.1 mouse_genomes_project 13 61014572 61125791 - MGP_NODShiLtJ_P0036995 Klhl3 protein_coding protein_coding MGP_NODShiLtJ_T0036996.1 MGP_NODShiLtJ_G0020466.1 mouse_genomes_project 13 61015308 61114605 - MGP_NODShiLtJ_P0036996 Klhl3 protein_coding protein_coding MGP_NODShiLtJ_T0037615.1 MGP_NODShiLtJ_G0020688.1 mouse_genomes_project 13 105384452 105384840 + MGP_NODShiLtJ_P0037615 Gm17622 protein_coding protein_coding MGP_NODShiLtJ_T0006461.1 MGP_NODShiLtJ_G0005357.1 mouse_genomes_project 13 25484630 25495481 - Gm11351 lincRNA lincRNA MGP_NODShiLtJ_T0009877.1 MGP_NODShiLtJ_G0008010.1 mouse_genomes_project 13 125631149 125631249 + Gm25950 miRNA miRNA MGP_NODShiLtJ_T0036087.1 MGP_NODShiLtJ_G0020094.1 mouse_genomes_project 13 12744302 12767722 + MGP_NODShiLtJ_P0036087 Psma2 protein_coding protein_coding MGP_NODShiLtJ_T0100082.1 MGP_NODShiLtJ_G0038476.1 mouse_genomes_project 13 115141586 115141716 - Gm25631 snoRNA snoRNA MGP_NODShiLtJ_T0036676.1 MGP_NODShiLtJ_G0020370.1 mouse_genomes_project 13 51367338 51376098 + MGP_NODShiLtJ_P0036676 Ninj1 protein_coding protein_coding MGP_NODShiLtJ_T0036677.1 MGP_NODShiLtJ_G0020370.1 mouse_genomes_project 13 51367378 51376098 + MGP_NODShiLtJ_P0036677 Ninj1 protein_coding protein_coding MGP_NODShiLtJ_T0036678.1 MGP_NODShiLtJ_G0020370.1 mouse_genomes_project 13 51367389 51375613 + MGP_NODShiLtJ_P0036678 Ninj1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036679.1 MGP_NODShiLtJ_G0020370.1 mouse_genomes_project 13 51367620 51374778 + Ninj1 protein_coding processed_transcript MGP_NODShiLtJ_T0036680.1 MGP_NODShiLtJ_G0020370.1 mouse_genomes_project 13 51370149 51376098 + Ninj1 protein_coding processed_transcript MGP_NODShiLtJ_T0037240.1 MGP_NODShiLtJ_G0020563.1 mouse_genomes_project 13 71790921 71793359 + MGP_NODShiLtJ_P0037240 protein_coding protein_coding MGP_NODShiLtJ_T0037158.1 MGP_NODShiLtJ_G0020520.1 mouse_genomes_project 13 68097779 68119212 - MGP_NODShiLtJ_P0037158 1190003K10Rik protein_coding protein_coding MGP_NODShiLtJ_T0037288.1 MGP_NODShiLtJ_G0020587.1 mouse_genomes_project 13 77834402 77858531 + MGP_NODShiLtJ_P0037288 Tert protein_coding protein_coding MGP_NODShiLtJ_T0037979.1 MGP_NODShiLtJ_G0020812.1 mouse_genomes_project 13 131937907 131964752 - MGP_NODShiLtJ_P0037979 Zfp131 protein_coding protein_coding MGP_NODShiLtJ_T0037980.1 MGP_NODShiLtJ_G0020812.1 mouse_genomes_project 13 131937907 131964752 - MGP_NODShiLtJ_P0037980 Zfp131 protein_coding protein_coding MGP_NODShiLtJ_T0037909.1 MGP_NODShiLtJ_G0020777.1 mouse_genomes_project 13 123735996 123798808 - MGP_NODShiLtJ_P0037909 Skiv2l2 protein_coding protein_coding MGP_NODShiLtJ_T0036847.1 MGP_NODShiLtJ_G0020420.1 mouse_genomes_project 13 57477814 57485552 - MGP_NODShiLtJ_P0036847 Sncb protein_coding protein_coding MGP_NODShiLtJ_T0036848.1 MGP_NODShiLtJ_G0020420.1 mouse_genomes_project 13 57478334 57485054 - MGP_NODShiLtJ_P0036848 Sncb protein_coding protein_coding MGP_NODShiLtJ_T0036849.1 MGP_NODShiLtJ_G0020420.1 mouse_genomes_project 13 57478381 57482019 - Sncb protein_coding retained_intron MGP_NODShiLtJ_T0036850.1 MGP_NODShiLtJ_G0020420.1 mouse_genomes_project 13 57484010 57485449 - Sncb protein_coding retained_intron MGP_NODShiLtJ_T0097760.1 MGP_NODShiLtJ_G0036172.1 mouse_genomes_project 13 97599015 97600273 - pseudogene pseudogene MGP_NODShiLtJ_T0006558.1 MGP_NODShiLtJ_G0005424.1 mouse_genomes_project 13 106448882 106513635 + Lncenc1 lincRNA lincRNA MGP_NODShiLtJ_T0006559.1 MGP_NODShiLtJ_G0005424.1 mouse_genomes_project 13 106499030 106513635 + Lncenc1 lincRNA lincRNA MGP_NODShiLtJ_T0006560.1 MGP_NODShiLtJ_G0005424.1 mouse_genomes_project 13 106499284 106506030 + Lncenc1 lincRNA lincRNA MGP_NODShiLtJ_T0000874.1 MGP_NODShiLtJ_G0000803.1 mouse_genomes_project 13 107667037 107667624 - TEC TEC MGP_NODShiLtJ_T0037094.1 MGP_NODShiLtJ_G0020500.1 mouse_genomes_project 13 64497081 64505683 - MGP_NODShiLtJ_P0037094 Cts8 protein_coding protein_coding MGP_NODShiLtJ_T0003456.1 MGP_NODShiLtJ_G0003147.1 mouse_genomes_project 13 129324038 129350635 - antisense antisense MGP_NODShiLtJ_T0036163.1 MGP_NODShiLtJ_G0020126.1 mouse_genomes_project 13 20429691 20442816 - MGP_NODShiLtJ_P0036163 Zscan26 protein_coding protein_coding MGP_NODShiLtJ_T0036164.1 MGP_NODShiLtJ_G0020126.1 mouse_genomes_project 13 20433037 20442819 - MGP_NODShiLtJ_P0036164 Zscan26 protein_coding protein_coding MGP_NODShiLtJ_T0036127.1 MGP_NODShiLtJ_G0020111.1 mouse_genomes_project 13 18614060 18619597 - MGP_NODShiLtJ_P0036127 A530099J19Rik protein_coding protein_coding MGP_NODShiLtJ_T0003383.1 MGP_NODShiLtJ_G0003101.1 mouse_genomes_project 13 21929249 21930061 + antisense antisense MGP_NODShiLtJ_T0035993.1 MGP_NODShiLtJ_G0020067.1 mouse_genomes_project 13 6292303 6299621 + MGP_NODShiLtJ_P0035993 Idi1 protein_coding protein_coding MGP_NODShiLtJ_T0035994.1 MGP_NODShiLtJ_G0020067.1 mouse_genomes_project 13 6292745 6297497 + MGP_NODShiLtJ_P0035994 Idi1 protein_coding protein_coding MGP_NODShiLtJ_T0035995.1 MGP_NODShiLtJ_G0020067.1 mouse_genomes_project 13 6292795 6298423 + MGP_NODShiLtJ_P0035995 Idi1 protein_coding protein_coding MGP_NODShiLtJ_T0035996.1 MGP_NODShiLtJ_G0020067.1 mouse_genomes_project 13 6292796 6297539 + MGP_NODShiLtJ_P0035996 Idi1 protein_coding protein_coding MGP_NODShiLtJ_T0035997.1 MGP_NODShiLtJ_G0020067.1 mouse_genomes_project 13 6293871 6297384 + Idi1 protein_coding retained_intron MGP_NODShiLtJ_T0037370.1 MGP_NODShiLtJ_G0020621.1 mouse_genomes_project 13 82380497 82905495 + MGP_NODShiLtJ_P0037370 Fam172a protein_coding protein_coding MGP_NODShiLtJ_T0037371.1 MGP_NODShiLtJ_G0020621.1 mouse_genomes_project 13 82380502 82908083 + MGP_NODShiLtJ_P0037371 Fam172a protein_coding protein_coding MGP_NODShiLtJ_T0037874.1 MGP_NODShiLtJ_G0020765.1 mouse_genomes_project 13 121034439 121041288 + MGP_NODShiLtJ_P0037874 Plk2 protein_coding protein_coding MGP_NODShiLtJ_T0003433.1 MGP_NODShiLtJ_G0003133.1 mouse_genomes_project 13 100150322 100196724 - 4833422C13Rik antisense antisense MGP_NODShiLtJ_T0003434.1 MGP_NODShiLtJ_G0003133.1 mouse_genomes_project 13 100156550 100196628 - 4833422C13Rik antisense antisense MGP_NODShiLtJ_T0003435.1 MGP_NODShiLtJ_G0003133.1 mouse_genomes_project 13 100161919 100196680 - 4833422C13Rik antisense antisense MGP_NODShiLtJ_T0036188.1 MGP_NODShiLtJ_G0020144.1 mouse_genomes_project 13 20811123 20811636 - MGP_NODShiLtJ_P0036188 Hist1h2ap protein_coding protein_coding MGP_NODShiLtJ_T0037496.1 MGP_NODShiLtJ_G0020646.1 mouse_genomes_project 13 100256356 100267839 - MGP_NODShiLtJ_P0037496 Zcchc9 protein_coding protein_coding MGP_NODShiLtJ_T0037497.1 MGP_NODShiLtJ_G0020646.1 mouse_genomes_project 13 100256357 100267839 - Zcchc9 protein_coding retained_intron MGP_NODShiLtJ_T0037498.1 MGP_NODShiLtJ_G0020646.1 mouse_genomes_project 13 100256357 100260802 - MGP_NODShiLtJ_P0037498 Zcchc9 protein_coding protein_coding MGP_NODShiLtJ_T0037499.1 MGP_NODShiLtJ_G0020646.1 mouse_genomes_project 13 100258657 100267795 - Zcchc9 protein_coding retained_intron MGP_NODShiLtJ_T0037500.1 MGP_NODShiLtJ_G0020646.1 mouse_genomes_project 13 100260306 100260817 - Zcchc9 protein_coding retained_intron MGP_NODShiLtJ_T0101621.1 MGP_NODShiLtJ_G0039790.1 mouse_genomes_project 13 22333801 22334279 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037711.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109846806 109880559 - MGP_NODShiLtJ_P0037711 Gtf2h2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037712.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109846995 109880778 - MGP_NODShiLtJ_P0037712 Gtf2h2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037713.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109855172 109880782 - MGP_NODShiLtJ_P0037713 Gtf2h2 protein_coding protein_coding MGP_NODShiLtJ_T0037714.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109855400 109880588 - Gtf2h2 protein_coding retained_intron MGP_NODShiLtJ_T0037715.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109855400 109880800 - MGP_NODShiLtJ_P0037715 Gtf2h2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037716.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109864204 109867834 - Gtf2h2 protein_coding processed_transcript MGP_NODShiLtJ_T0037717.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109866293 109868752 - Gtf2h2 protein_coding processed_transcript MGP_NODShiLtJ_T0037718.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109868631 109880800 - MGP_NODShiLtJ_P0037718 Gtf2h2 protein_coding protein_coding MGP_NODShiLtJ_T0037719.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109874811 109880595 - Gtf2h2 protein_coding retained_intron MGP_NODShiLtJ_T0037720.1 MGP_NODShiLtJ_G0020722.1 mouse_genomes_project 13 109875898 109880774 - Gtf2h2 protein_coding processed_transcript MGP_NODShiLtJ_T0036165.1 MGP_NODShiLtJ_G0020127.1 mouse_genomes_project 13 20455733 20457196 - MGP_NODShiLtJ_P0036165 Nkapl protein_coding protein_coding MGP_NODShiLtJ_T0036181.1 MGP_NODShiLtJ_G0020138.1 mouse_genomes_project 13 20692290 20697775 + MGP_NODShiLtJ_P0036181 protein_coding protein_coding MGP_NODShiLtJ_T0036182.1 MGP_NODShiLtJ_G0020138.1 mouse_genomes_project 13 20696794 20697796 + MGP_NODShiLtJ_P0036182 protein_coding protein_coding MGP_NODShiLtJ_T0037050.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62699629 62714154 + MGP_NODShiLtJ_P0037050 Naa35 protein_coding protein_coding MGP_NODShiLtJ_T0037051.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62699665 62749127 + MGP_NODShiLtJ_P0037051 Naa35 protein_coding protein_coding MGP_NODShiLtJ_T0037052.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62699764 62723175 + MGP_NODShiLtJ_P0037052 Naa35 protein_coding protein_coding MGP_NODShiLtJ_T0037053.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62700540 62738855 + MGP_NODShiLtJ_P0037053 Naa35 protein_coding protein_coding MGP_NODShiLtJ_T0037054.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62709722 62714627 + Naa35 protein_coding retained_intron MGP_NODShiLtJ_T0037055.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62712479 62732358 + MGP_NODShiLtJ_P0037055 Naa35 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037056.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62723620 62741971 + Naa35 protein_coding retained_intron MGP_NODShiLtJ_T0037057.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62723745 62739786 + Naa35 protein_coding retained_intron MGP_NODShiLtJ_T0037058.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62723780 62739812 + Naa35 protein_coding retained_intron MGP_NODShiLtJ_T0037059.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62723865 62738927 + MGP_NODShiLtJ_P0037059 Naa35 protein_coding protein_coding MGP_NODShiLtJ_T0037060.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62732324 62749090 + Naa35 protein_coding processed_transcript MGP_NODShiLtJ_T0037061.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62732374 62740002 + Naa35 protein_coding retained_intron MGP_NODShiLtJ_T0037062.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62732375 62742293 + MGP_NODShiLtJ_P0037062 Naa35 protein_coding protein_coding MGP_NODShiLtJ_T0037063.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62738781 62743285 + Naa35 protein_coding retained_intron MGP_NODShiLtJ_T0037064.1 MGP_NODShiLtJ_G0020478.1 mouse_genomes_project 13 62747062 62748977 + Naa35 protein_coding retained_intron MGP_NODShiLtJ_T0037601.1 MGP_NODShiLtJ_G0020683.1 mouse_genomes_project 13 104815933 105007110 - MGP_NODShiLtJ_P0037601 Sv2c protein_coding protein_coding MGP_NODShiLtJ_T0037602.1 MGP_NODShiLtJ_G0020683.1 mouse_genomes_project 13 104822470 104846480 - Sv2c protein_coding processed_transcript MGP_NODShiLtJ_T0037603.1 MGP_NODShiLtJ_G0020683.1 mouse_genomes_project 13 104837509 104961211 - MGP_NODShiLtJ_P0037603 Sv2c protein_coding protein_coding MGP_NODShiLtJ_T0037079.1 MGP_NODShiLtJ_G0020488.1 mouse_genomes_project 13 63782437 63952997 + MGP_NODShiLtJ_P0037079 Dapk1 protein_coding protein_coding MGP_NODShiLtJ_T0037080.1 MGP_NODShiLtJ_G0020488.1 mouse_genomes_project 13 63782735 63952997 + MGP_NODShiLtJ_P0037080 Dapk1 protein_coding protein_coding MGP_NODShiLtJ_T0012819.1 MGP_NODShiLtJ_G0010927.1 mouse_genomes_project 13 78253420 78254762 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006470.1 MGP_NODShiLtJ_G0005362.1 mouse_genomes_project 13 30270194 30276108 + Gm11368 lincRNA lincRNA MGP_NODShiLtJ_T0037335.1 MGP_NODShiLtJ_G0020604.1 mouse_genomes_project 13 78620211 78624640 - MGP_NODShiLtJ_P0037335 Lrrc14b protein_coding protein_coding MGP_NODShiLtJ_T0097931.1 MGP_NODShiLtJ_G0036343.1 mouse_genomes_project 13 105827155 105827270 + Gm27792 rRNA rRNA MGP_NODShiLtJ_T0036387.1 MGP_NODShiLtJ_G0020253.1 mouse_genomes_project 13 30097926 30190289 - MGP_NODShiLtJ_P0036387 E2f3 protein_coding protein_coding MGP_NODShiLtJ_T0036388.1 MGP_NODShiLtJ_G0020253.1 mouse_genomes_project 13 30110127 30188631 - MGP_NODShiLtJ_P0036388 E2f3 protein_coding protein_coding MGP_NODShiLtJ_T0036754.1 MGP_NODShiLtJ_G0020396.1 mouse_genomes_project 13 54989069 55018169 - MGP_NODShiLtJ_P0036754 Diras2 protein_coding protein_coding MGP_NODShiLtJ_T0012779.1 MGP_NODShiLtJ_G0010887.1 mouse_genomes_project 13 24567038 24567348 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037882.1 MGP_NODShiLtJ_G0020768.1 mouse_genomes_project 13 122366543 122366608 + MGP_NODShiLtJ_P0037882 Gm10198 protein_coding protein_coding MGP_NODShiLtJ_T0012791.1 MGP_NODShiLtJ_G0010899.1 mouse_genomes_project 13 30404333 30404762 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101630.1 MGP_NODShiLtJ_G0039799.1 mouse_genomes_project 13 27158514 27163423 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037167.1 MGP_NODShiLtJ_G0020526.1 mouse_genomes_project 13 68797882 68798830 + MGP_NODShiLtJ_P0037167 Olfr465-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0037887.1 MGP_NODShiLtJ_G0020770.1 mouse_genomes_project 13 122513613 122582054 - MGP_NODShiLtJ_P0037887 Map3k1 protein_coding protein_coding MGP_NODShiLtJ_T0037888.1 MGP_NODShiLtJ_G0020770.1 mouse_genomes_project 13 122517045 122519609 - Map3k1 protein_coding retained_intron MGP_NODShiLtJ_T0037889.1 MGP_NODShiLtJ_G0020770.1 mouse_genomes_project 13 122522082 122523218 - Map3k1 protein_coding retained_intron MGP_NODShiLtJ_T0037890.1 MGP_NODShiLtJ_G0020770.1 mouse_genomes_project 13 122536175 122537118 - Map3k1 protein_coding processed_transcript MGP_NODShiLtJ_T0037891.1 MGP_NODShiLtJ_G0020770.1 mouse_genomes_project 13 122536548 122581502 - MGP_NODShiLtJ_P0037891 Map3k1 protein_coding protein_coding MGP_NODShiLtJ_T0003436.1 MGP_NODShiLtJ_G0003134.1 mouse_genomes_project 13 100321200 100321813 + 1700119I11Rik antisense antisense MGP_NODShiLtJ_T0003437.1 MGP_NODShiLtJ_G0003134.1 mouse_genomes_project 13 100321253 100321807 + 1700119I11Rik antisense antisense MGP_NODShiLtJ_T0036003.1 MGP_NODShiLtJ_G0020071.1 mouse_genomes_project 13 6558166 6640160 + MGP_NODShiLtJ_P0036003 Larp4b protein_coding protein_coding MGP_NODShiLtJ_T0036004.1 MGP_NODShiLtJ_G0020071.1 mouse_genomes_project 13 6558192 6640353 + MGP_NODShiLtJ_P0036004 Larp4b protein_coding protein_coding MGP_NODShiLtJ_T0036005.1 MGP_NODShiLtJ_G0020071.1 mouse_genomes_project 13 6558197 6588796 + MGP_NODShiLtJ_P0036005 Larp4b protein_coding protein_coding MGP_NODShiLtJ_T0036006.1 MGP_NODShiLtJ_G0020071.1 mouse_genomes_project 13 6558267 6643465 + MGP_NODShiLtJ_P0036006 Larp4b protein_coding protein_coding MGP_NODShiLtJ_T0036007.1 MGP_NODShiLtJ_G0020071.1 mouse_genomes_project 13 6604343 6611810 + Larp4b protein_coding processed_transcript MGP_NODShiLtJ_T0036008.1 MGP_NODShiLtJ_G0020071.1 mouse_genomes_project 13 6604563 6605331 + Larp4b protein_coding processed_transcript MGP_NODShiLtJ_T0036009.1 MGP_NODShiLtJ_G0020071.1 mouse_genomes_project 13 6637425 6642173 + Larp4b protein_coding retained_intron MGP_NODShiLtJ_T0009823.1 MGP_NODShiLtJ_G0007956.1 mouse_genomes_project 13 16357228 16357349 + Mir466i miRNA miRNA MGP_NODShiLtJ_T0101613.1 MGP_NODShiLtJ_G0039782.1 mouse_genomes_project 13 21872941 21873485 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036332.1 MGP_NODShiLtJ_G0020225.1 mouse_genomes_project 13 24279827 24339683 + MGP_NODShiLtJ_P0036332 D130043K22Rik protein_coding protein_coding MGP_NODShiLtJ_T0036333.1 MGP_NODShiLtJ_G0020225.1 mouse_genomes_project 13 24279827 24339676 + MGP_NODShiLtJ_P0036333 D130043K22Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036334.1 MGP_NODShiLtJ_G0020225.1 mouse_genomes_project 13 24290053 24338232 + MGP_NODShiLtJ_P0036334 D130043K22Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036335.1 MGP_NODShiLtJ_G0020225.1 mouse_genomes_project 13 24316617 24318751 + D130043K22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0036336.1 MGP_NODShiLtJ_G0020225.1 mouse_genomes_project 13 24329002 24338281 + D130043K22Rik protein_coding processed_transcript MGP_NODShiLtJ_T0037287.1 MGP_NODShiLtJ_G0020586.1 mouse_genomes_project 13 77811465 77828102 + MGP_NODShiLtJ_P0037287 Clptm1l protein_coding protein_coding MGP_NODShiLtJ_T0006458.1 MGP_NODShiLtJ_G0005354.1 mouse_genomes_project 13 23745040 23746011 - Gm11342 lincRNA lincRNA MGP_NODShiLtJ_T0036175.1 MGP_NODShiLtJ_G0020134.1 mouse_genomes_project 13 20570948 20579838 - MGP_NODShiLtJ_P0036175 Olfr1364 protein_coding protein_coding MGP_NODShiLtJ_T0036176.1 MGP_NODShiLtJ_G0020134.1 mouse_genomes_project 13 20570948 20571893 - MGP_NODShiLtJ_P0036176 Olfr1364 protein_coding protein_coding MGP_NODShiLtJ_T0006504.1 MGP_NODShiLtJ_G0005387.1 mouse_genomes_project 13 50044720 50109203 - 4931429P17Rik lincRNA lincRNA MGP_NODShiLtJ_T0037649.1 MGP_NODShiLtJ_G0020698.1 mouse_genomes_project 13 106976527 107326379 - MGP_NODShiLtJ_P0037649 Arhgef28 protein_coding protein_coding MGP_NODShiLtJ_T0006481.1 MGP_NODShiLtJ_G0005371.1 mouse_genomes_project 13 31886629 31903642 - 1700018A04Rik lincRNA lincRNA MGP_NODShiLtJ_T0006482.1 MGP_NODShiLtJ_G0005371.1 mouse_genomes_project 13 31888534 31903650 - 1700018A04Rik lincRNA lincRNA MGP_NODShiLtJ_T0006483.1 MGP_NODShiLtJ_G0005371.1 mouse_genomes_project 13 31899423 31903650 - 1700018A04Rik lincRNA lincRNA MGP_NODShiLtJ_T0100071.1 MGP_NODShiLtJ_G0038465.1 mouse_genomes_project 13 80481100 80481231 - Gm23319 snoRNA snoRNA MGP_NODShiLtJ_T0009842.1 MGP_NODShiLtJ_G0007975.1 mouse_genomes_project 13 50671391 50671480 - Mirlet7f-1 miRNA miRNA MGP_NODShiLtJ_T0012774.1 MGP_NODShiLtJ_G0010882.1 mouse_genomes_project 13 23305549 23305914 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006490.1 MGP_NODShiLtJ_G0005376.1 mouse_genomes_project 13 38618290 38620024 - Gm29459 lincRNA lincRNA MGP_NODShiLtJ_T0101601.1 MGP_NODShiLtJ_G0039770.1 mouse_genomes_project 13 21365013 21365880 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037946.1 MGP_NODShiLtJ_G0020797.1 mouse_genomes_project 13 127691566 127702891 - MGP_NODShiLtJ_P0037946 Isl1 protein_coding protein_coding MGP_NODShiLtJ_T0037947.1 MGP_NODShiLtJ_G0020797.1 mouse_genomes_project 13 127692549 127702624 - MGP_NODShiLtJ_P0037947 Isl1 protein_coding protein_coding MGP_NODShiLtJ_T0037948.1 MGP_NODShiLtJ_G0020797.1 mouse_genomes_project 13 127692681 127696617 - Isl1 protein_coding retained_intron MGP_NODShiLtJ_T0037949.1 MGP_NODShiLtJ_G0020797.1 mouse_genomes_project 13 127696311 127699620 - Isl1 protein_coding processed_transcript MGP_NODShiLtJ_T0037950.1 MGP_NODShiLtJ_G0020797.1 mouse_genomes_project 13 127700111 127702887 - Isl1 protein_coding retained_intron MGP_NODShiLtJ_T0036392.1 MGP_NODShiLtJ_G0020255.1 mouse_genomes_project 13 30568636 30582329 + Agtr1a protein_coding processed_transcript MGP_NODShiLtJ_T0036393.1 MGP_NODShiLtJ_G0020255.1 mouse_genomes_project 13 30568636 30627758 + MGP_NODShiLtJ_P0036393 Agtr1a protein_coding protein_coding MGP_NODShiLtJ_T0002537.1 MGP_NODShiLtJ_G0002438.1 mouse_genomes_project 13 17958782 17959356 + MGP_NODShiLtJ_P0002537 Tcrg-V6 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0002538.1 MGP_NODShiLtJ_G0002438.1 mouse_genomes_project 13 17958794 17959356 + MGP_NODShiLtJ_P0002538 Tcrg-V6 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0009858.1 MGP_NODShiLtJ_G0007991.1 mouse_genomes_project 13 66815980 66816048 + Mir24-1 miRNA miRNA MGP_NODShiLtJ_T0037083.1 MGP_NODShiLtJ_G0020491.1 mouse_genomes_project 13 64041895 64066932 - MGP_NODShiLtJ_P0037083 4930486L24Rik protein_coding protein_coding MGP_NODShiLtJ_T0009869.1 MGP_NODShiLtJ_G0008002.1 mouse_genomes_project 13 105246363 105246476 + Gm25213 miRNA miRNA MGP_NODShiLtJ_T0037613.1 MGP_NODShiLtJ_G0020687.1 mouse_genomes_project 13 105374664 105438518 - MGP_NODShiLtJ_P0037613 Polk protein_coding protein_coding MGP_NODShiLtJ_T0037614.1 MGP_NODShiLtJ_G0020687.1 mouse_genomes_project 13 105376145 105414377 - MGP_NODShiLtJ_P0037614 Polk protein_coding protein_coding MGP_NODShiLtJ_T0036217.1 MGP_NODShiLtJ_G0020163.1 mouse_genomes_project 13 21308884 21309775 + MGP_NODShiLtJ_P0036217 Vmn1r194 protein_coding protein_coding MGP_NODShiLtJ_T0036411.1 MGP_NODShiLtJ_G0020267.1 mouse_genomes_project 13 33156115 33247589 - MGP_NODShiLtJ_P0036411 Mylk4 protein_coding protein_coding MGP_NODShiLtJ_T0036412.1 MGP_NODShiLtJ_G0020267.1 mouse_genomes_project 13 33159953 33247526 - MGP_NODShiLtJ_P0036412 Mylk4 protein_coding protein_coding MGP_NODShiLtJ_T0036413.1 MGP_NODShiLtJ_G0020267.1 mouse_genomes_project 13 33164138 33197273 - MGP_NODShiLtJ_P0036413 Mylk4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036414.1 MGP_NODShiLtJ_G0020267.1 mouse_genomes_project 13 33232323 33249764 - Mylk4 protein_coding processed_transcript MGP_NODShiLtJ_T0036254.1 MGP_NODShiLtJ_G0020194.1 mouse_genomes_project 13 22895744 22896488 + MGP_NODShiLtJ_P0036254 Hist1h1d protein_coding protein_coding MGP_NODShiLtJ_T0037616.1 MGP_NODShiLtJ_G0020689.1 mouse_genomes_project 13 105438650 105545907 + MGP_NODShiLtJ_P0037616 Col4a3bp protein_coding protein_coding MGP_NODShiLtJ_T0037617.1 MGP_NODShiLtJ_G0020689.1 mouse_genomes_project 13 105438767 105548059 + MGP_NODShiLtJ_P0037617 Col4a3bp protein_coding protein_coding MGP_NODShiLtJ_T0037618.1 MGP_NODShiLtJ_G0020689.1 mouse_genomes_project 13 105438767 105548059 + MGP_NODShiLtJ_P0037618 Col4a3bp protein_coding protein_coding MGP_NODShiLtJ_T0037065.1 MGP_NODShiLtJ_G0020479.1 mouse_genomes_project 13 62749324 62791012 - MGP_NODShiLtJ_P0037065 Golm1 protein_coding protein_coding MGP_NODShiLtJ_T0037066.1 MGP_NODShiLtJ_G0020479.1 mouse_genomes_project 13 62749324 62791012 - MGP_NODShiLtJ_P0037066 Golm1 protein_coding protein_coding MGP_NODShiLtJ_T0017241.1 MGP_NODShiLtJ_G0015131.1 mouse_genomes_project 13 118732800 118735801 - Gm2822 processed_transcript processed_transcript MGP_NODShiLtJ_T0012823.1 MGP_NODShiLtJ_G0010931.1 mouse_genomes_project 13 81558262 81558931 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011241.1 MGP_NODShiLtJ_G0009374.1 mouse_genomes_project 13 44659214 44659477 - Gm26086 misc_RNA misc_RNA MGP_NODShiLtJ_T0037981.1 MGP_NODShiLtJ_G0020813.1 mouse_genomes_project 13 132007582 132008364 - MGP_NODShiLtJ_P0037981 protein_coding protein_coding MGP_NODShiLtJ_T0037656.1 MGP_NODShiLtJ_G0020701.1 mouse_genomes_project 13 107410883 107437816 + MGP_NODShiLtJ_P0037656 Gm21976 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037657.1 MGP_NODShiLtJ_G0020701.1 mouse_genomes_project 13 107410888 107424514 + MGP_NODShiLtJ_P0037657 Gm21976 protein_coding protein_coding MGP_NODShiLtJ_T0037658.1 MGP_NODShiLtJ_G0020701.1 mouse_genomes_project 13 107410934 107437816 + MGP_NODShiLtJ_P0037658 Gm21976 protein_coding protein_coding MGP_NODShiLtJ_T0037659.1 MGP_NODShiLtJ_G0020701.1 mouse_genomes_project 13 107433197 107437754 + MGP_NODShiLtJ_P0037659 Gm21976 protein_coding protein_coding MGP_NODShiLtJ_T0037107.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66819481 66960459 - MGP_NODShiLtJ_P0037107 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037108.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66826296 66960438 - MGP_NODShiLtJ_P0037108 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037109.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66826511 66832174 - Fancc protein_coding processed_transcript MGP_NODShiLtJ_T0037110.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66826512 66960439 - MGP_NODShiLtJ_P0037110 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037111.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66826892 66960408 - MGP_NODShiLtJ_P0037111 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037112.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66827253 66839987 - Fancc protein_coding processed_transcript MGP_NODShiLtJ_T0037113.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66831278 66960436 - Fancc protein_coding retained_intron MGP_NODShiLtJ_T0037114.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66836267 66846831 - Fancc protein_coding processed_transcript MGP_NODShiLtJ_T0037115.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66845505 66869433 - Fancc protein_coding processed_transcript MGP_NODShiLtJ_T0037116.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66845505 66960459 - Fancc protein_coding retained_intron MGP_NODShiLtJ_T0037117.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66855534 66926014 - MGP_NODShiLtJ_P0037117 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037118.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66864630 66959971 - MGP_NODShiLtJ_P0037118 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037119.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66864681 66934074 - MGP_NODShiLtJ_P0037119 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037120.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66864690 66926141 - Fancc protein_coding retained_intron MGP_NODShiLtJ_T0037121.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66864720 67023831 - MGP_NODShiLtJ_P0037121 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037122.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66881014 66930919 - MGP_NODShiLtJ_P0037122 Fancc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037123.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66930789 66960397 - MGP_NODShiLtJ_P0037123 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037124.1 MGP_NODShiLtJ_G0020509.1 mouse_genomes_project 13 66930846 66937526 - MGP_NODShiLtJ_P0037124 Fancc protein_coding protein_coding MGP_NODShiLtJ_T0037193.1 MGP_NODShiLtJ_G0020538.1 mouse_genomes_project 13 70858244 70891139 - protein_coding processed_transcript MGP_NODShiLtJ_T0037194.1 MGP_NODShiLtJ_G0020538.1 mouse_genomes_project 13 70858244 70901759 - MGP_NODShiLtJ_P0037194 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037195.1 MGP_NODShiLtJ_G0020538.1 mouse_genomes_project 13 70858245 70891224 - MGP_NODShiLtJ_P0037195 protein_coding protein_coding MGP_NODShiLtJ_T0037197.1 MGP_NODShiLtJ_G0020538.1 mouse_genomes_project 13 70862790 70891224 - protein_coding processed_transcript MGP_NODShiLtJ_T0037199.1 MGP_NODShiLtJ_G0020538.1 mouse_genomes_project 13 70898618 70901814 - protein_coding processed_transcript MGP_NODShiLtJ_T0037405.1 MGP_NODShiLtJ_G0020629.1 mouse_genomes_project 13 87376619 87391931 + MGP_NODShiLtJ_P0037405 Cetn3 protein_coding protein_coding MGP_NODShiLtJ_T0101600.1 MGP_NODShiLtJ_G0039769.1 mouse_genomes_project 13 21164961 21165419 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037171.1 MGP_NODShiLtJ_G0020530.1 mouse_genomes_project 13 68949487 68984908 + MGP_NODShiLtJ_P0037171 Zfp369 protein_coding protein_coding MGP_NODShiLtJ_T0037172.1 MGP_NODShiLtJ_G0020530.1 mouse_genomes_project 13 68949487 68970974 + MGP_NODShiLtJ_P0037172 Zfp369 protein_coding protein_coding MGP_NODShiLtJ_T0037173.1 MGP_NODShiLtJ_G0020530.1 mouse_genomes_project 13 68949525 68960680 + Zfp369 protein_coding retained_intron MGP_NODShiLtJ_T0037174.1 MGP_NODShiLtJ_G0020530.1 mouse_genomes_project 13 68949576 68958163 + MGP_NODShiLtJ_P0037174 Zfp369 protein_coding protein_coding MGP_NODShiLtJ_T0036712.1 MGP_NODShiLtJ_G0020384.1 mouse_genomes_project 13 52188528 52188768 - MGP_NODShiLtJ_P0036712 protein_coding protein_coding MGP_NODShiLtJ_T0100059.1 MGP_NODShiLtJ_G0038453.1 mouse_genomes_project 13 50709147 50709279 - Gm25232 snoRNA snoRNA MGP_NODShiLtJ_T0012765.1 MGP_NODShiLtJ_G0010873.1 mouse_genomes_project 13 21152904 21153185 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036665.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51211290 51321486 - MGP_NODShiLtJ_P0036665 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036666.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51211290 51321486 - MGP_NODShiLtJ_P0036666 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036667.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51211290 51321484 - MGP_NODShiLtJ_P0036667 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036668.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51211290 51321486 - MGP_NODShiLtJ_P0036668 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036669.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51211296 51320704 - MGP_NODShiLtJ_P0036669 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036670.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51211297 51320704 - MGP_NODShiLtJ_P0036670 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036671.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51212596 51234882 - MGP_NODShiLtJ_P0036671 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036672.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51212607 51252031 - MGP_NODShiLtJ_P0036672 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036673.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51212968 51321486 - MGP_NODShiLtJ_P0036673 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036674.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51213861 51321486 - MGP_NODShiLtJ_P0036674 Wnk2 protein_coding protein_coding MGP_NODShiLtJ_T0036675.1 MGP_NODShiLtJ_G0020369.1 mouse_genomes_project 13 51235327 51245005 - MGP_NODShiLtJ_P0036675 Wnk2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037798.1 MGP_NODShiLtJ_G0020743.1 mouse_genomes_project 13 113961440 114007564 + MGP_NODShiLtJ_P0037798 protein_coding protein_coding MGP_NODShiLtJ_T0100041.1 MGP_NODShiLtJ_G0038435.1 mouse_genomes_project 13 2076204 2076336 - Gm24790 snoRNA snoRNA MGP_NODShiLtJ_T0036427.1 MGP_NODShiLtJ_G0020275.1 mouse_genomes_project 13 33603215 33623756 + MGP_NODShiLtJ_P0036427 Serpinb1b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037537.1 MGP_NODShiLtJ_G0020660.1 mouse_genomes_project 13 101690289 101762872 - MGP_NODShiLtJ_P0037537 Papd4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037538.1 MGP_NODShiLtJ_G0020660.1 mouse_genomes_project 13 101692641 101762726 - MGP_NODShiLtJ_P0037538 Papd4 protein_coding protein_coding MGP_NODShiLtJ_T0036166.1 MGP_NODShiLtJ_G0020128.1 mouse_genomes_project 13 20467117 20473706 + MGP_NODShiLtJ_P0036166 Zkscan4 protein_coding protein_coding MGP_NODShiLtJ_T0037000.1 MGP_NODShiLtJ_G0020469.1 mouse_genomes_project 13 61197389 61238433 - MGP_NODShiLtJ_P0037000 Ubqln1 protein_coding protein_coding MGP_NODShiLtJ_T0037001.1 MGP_NODShiLtJ_G0020469.1 mouse_genomes_project 13 61197389 61238433 - MGP_NODShiLtJ_P0037001 Ubqln1 protein_coding protein_coding MGP_NODShiLtJ_T0036583.1 MGP_NODShiLtJ_G0020337.1 mouse_genomes_project 13 44812679 44919815 - MGP_NODShiLtJ_P0036583 Gfod1 protein_coding protein_coding MGP_NODShiLtJ_T0035922.1 MGP_NODShiLtJ_G0020041.1 mouse_genomes_project 13 111449 141552 + MGP_NODShiLtJ_P0035922 Gdi2 protein_coding protein_coding MGP_NODShiLtJ_T0009836.1 MGP_NODShiLtJ_G0007969.1 mouse_genomes_project 13 31949412 31949510 - Gm27516 miRNA miRNA MGP_NODShiLtJ_T0037190.1 MGP_NODShiLtJ_G0020535.1 mouse_genomes_project 13 70714416 70779301 + MGP_NODShiLtJ_P0037190 Ptdss1 protein_coding protein_coding MGP_NODShiLtJ_T0037650.1 MGP_NODShiLtJ_G0020699.1 mouse_genomes_project 13 107375560 107393004 - MGP_NODShiLtJ_P0037650 Utp15 protein_coding protein_coding MGP_NODShiLtJ_T0037907.1 MGP_NODShiLtJ_G0020776.1 mouse_genomes_project 13 123668923 123736098 + MGP_NODShiLtJ_P0037907 Plpp1 protein_coding protein_coding MGP_NODShiLtJ_T0037908.1 MGP_NODShiLtJ_G0020776.1 mouse_genomes_project 13 123668952 123735864 + MGP_NODShiLtJ_P0037908 Plpp1 protein_coding protein_coding MGP_NODShiLtJ_T0012825.1 MGP_NODShiLtJ_G0010933.1 mouse_genomes_project 13 85352317 85353481 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000880.1 MGP_NODShiLtJ_G0000809.1 mouse_genomes_project 13 111687626 111689606 - TEC TEC MGP_NODShiLtJ_T0036305.1 MGP_NODShiLtJ_G0020219.1 mouse_genomes_project 13 23785840 23881708 + MGP_NODShiLtJ_P0036305 Cmah protein_coding protein_coding MGP_NODShiLtJ_T0036306.1 MGP_NODShiLtJ_G0020219.1 mouse_genomes_project 13 23802140 23847021 + Cmah protein_coding processed_transcript MGP_NODShiLtJ_T0036307.1 MGP_NODShiLtJ_G0020219.1 mouse_genomes_project 13 23826832 23846580 + Cmah protein_coding processed_transcript MGP_NODShiLtJ_T0036308.1 MGP_NODShiLtJ_G0020219.1 mouse_genomes_project 13 23827155 23848012 + Cmah protein_coding processed_transcript MGP_NODShiLtJ_T0000871.1 MGP_NODShiLtJ_G0000800.1 mouse_genomes_project 13 98641672 98642567 - TEC TEC MGP_NODShiLtJ_T0036965.1 MGP_NODShiLtJ_G0020456.1 mouse_genomes_project 13 59137026 59144930 - MGP_NODShiLtJ_P0036965 Cxcl14 protein_coding protein_coding MGP_NODShiLtJ_T0036489.1 MGP_NODShiLtJ_G0020300.1 mouse_genomes_project 13 36900389 36913261 - MGP_NODShiLtJ_P0036489 Rpp40 protein_coding protein_coding MGP_NODShiLtJ_T0036490.1 MGP_NODShiLtJ_G0020300.1 mouse_genomes_project 13 36903605 36905770 - MGP_NODShiLtJ_P0036490 Rpp40 protein_coding protein_coding MGP_NODShiLtJ_T0036491.1 MGP_NODShiLtJ_G0020300.1 mouse_genomes_project 13 36903613 36913230 - Rpp40 protein_coding retained_intron MGP_NODShiLtJ_T0036492.1 MGP_NODShiLtJ_G0020300.1 mouse_genomes_project 13 36903616 36913246 - MGP_NODShiLtJ_P0036492 Rpp40 protein_coding protein_coding MGP_NODShiLtJ_T0037303.1 MGP_NODShiLtJ_G0020592.1 mouse_genomes_project 13 78139312 78166949 - MGP_NODShiLtJ_P0037303 Trip13 protein_coding protein_coding MGP_NODShiLtJ_T0036700.1 MGP_NODShiLtJ_G0020380.1 mouse_genomes_project 13 51832153 51851064 + MGP_NODShiLtJ_P0036700 Ogn protein_coding protein_coding MGP_NODShiLtJ_T0036912.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58260551 58277130 - MGP_NODShiLtJ_P0036912 Dbn1 protein_coding protein_coding MGP_NODShiLtJ_T0036913.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58260551 58277130 - MGP_NODShiLtJ_P0036913 Dbn1 protein_coding protein_coding MGP_NODShiLtJ_T0036914.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58261066 58277080 - MGP_NODShiLtJ_P0036914 Dbn1 protein_coding protein_coding MGP_NODShiLtJ_T0036915.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58262247 58277085 - Dbn1 protein_coding retained_intron MGP_NODShiLtJ_T0036916.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58268482 58270791 - Dbn1 protein_coding retained_intron MGP_NODShiLtJ_T0036917.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58268504 58270904 - Dbn1 protein_coding retained_intron MGP_NODShiLtJ_T0036918.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58270196 58276280 - MGP_NODShiLtJ_P0036918 Dbn1 protein_coding protein_coding MGP_NODShiLtJ_T0036919.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58270313 58275307 - Dbn1 protein_coding processed_transcript MGP_NODShiLtJ_T0036920.1 MGP_NODShiLtJ_G0020439.1 mouse_genomes_project 13 58270926 58272616 - Dbn1 protein_coding retained_intron MGP_NODShiLtJ_T0036223.1 MGP_NODShiLtJ_G0020169.1 mouse_genomes_project 13 21548800 21550995 + MGP_NODShiLtJ_P0036223 Vmn1r189 protein_coding protein_coding MGP_NODShiLtJ_T0000858.1 MGP_NODShiLtJ_G0000787.1 mouse_genomes_project 13 42152864 42155515 - TEC TEC MGP_NODShiLtJ_T0003387.1 MGP_NODShiLtJ_G0003105.1 mouse_genomes_project 13 24158334 24164802 + 1700016G14Rik antisense antisense MGP_NODShiLtJ_T0036330.1 MGP_NODShiLtJ_G0020224.1 mouse_genomes_project 13 24263811 24276845 + MGP_NODShiLtJ_P0036330 Tdp2 protein_coding protein_coding MGP_NODShiLtJ_T0036331.1 MGP_NODShiLtJ_G0020224.1 mouse_genomes_project 13 24263954 24271629 + Tdp2 protein_coding processed_transcript MGP_NODShiLtJ_T0036933.1 MGP_NODShiLtJ_G0020441.1 mouse_genomes_project 13 58312129 58317432 - MGP_NODShiLtJ_P0036933 Dok3 protein_coding protein_coding MGP_NODShiLtJ_T0036329.1 MGP_NODShiLtJ_G0020223.1 mouse_genomes_project 13 24246208 24263656 - MGP_NODShiLtJ_P0036329 Acot13 protein_coding protein_coding MGP_NODShiLtJ_T0036964.1 MGP_NODShiLtJ_G0020455.1 mouse_genomes_project 13 59094910 59096537 - MGP_NODShiLtJ_P0036964 Neurog1 protein_coding protein_coding MGP_NODShiLtJ_T0012815.1 MGP_NODShiLtJ_G0010923.1 mouse_genomes_project 13 73215685 73216681 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009818.1 MGP_NODShiLtJ_G0007951.1 mouse_genomes_project 13 564571 564695 - Gm22460 miRNA miRNA MGP_NODShiLtJ_T0036358.1 MGP_NODShiLtJ_G0020239.1 mouse_genomes_project 13 27128276 27134902 + MGP_NODShiLtJ_P0036358 Prl6a1 protein_coding protein_coding MGP_NODShiLtJ_T0036359.1 MGP_NODShiLtJ_G0020239.1 mouse_genomes_project 13 27129595 27134902 + MGP_NODShiLtJ_P0036359 Prl6a1 protein_coding protein_coding MGP_NODShiLtJ_T0035957.1 MGP_NODShiLtJ_G0020062.1 mouse_genomes_project 13 3610730 3649127 + MGP_NODShiLtJ_P0035957 Pitrm1 protein_coding protein_coding MGP_NODShiLtJ_T0035958.1 MGP_NODShiLtJ_G0020062.1 mouse_genomes_project 13 3610747 3648731 + MGP_NODShiLtJ_P0035958 Pitrm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036403.1 MGP_NODShiLtJ_G0020261.1 mouse_genomes_project 13 31261451 31263224 + MGP_NODShiLtJ_P0036403 Gm5447 protein_coding protein_coding MGP_NODShiLtJ_T0012758.1 MGP_NODShiLtJ_G0010866.1 mouse_genomes_project 13 20268198 20268669 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036803.1 MGP_NODShiLtJ_G0020411.1 mouse_genomes_project 13 57244802 57249957 + MGP_NODShiLtJ_P0036803 Arl10 protein_coding protein_coding MGP_NODShiLtJ_T0036804.1 MGP_NODShiLtJ_G0020411.1 mouse_genomes_project 13 57244834 57248798 + MGP_NODShiLtJ_P0036804 Arl10 protein_coding protein_coding MGP_NODShiLtJ_T0036805.1 MGP_NODShiLtJ_G0020411.1 mouse_genomes_project 13 57248162 57248691 + Arl10 protein_coding processed_transcript MGP_NODShiLtJ_T0009834.1 MGP_NODShiLtJ_G0007967.1 mouse_genomes_project 13 23317128 23317257 - Gm44344 miRNA miRNA MGP_NODShiLtJ_T0012764.1 MGP_NODShiLtJ_G0010872.1 mouse_genomes_project 13 21010835 21012251 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036189.1 MGP_NODShiLtJ_G0020145.1 mouse_genomes_project 13 20811141 20811609 - MGP_NODShiLtJ_P0036189 Hist1h2ao protein_coding protein_coding MGP_NODShiLtJ_T0098808.1 MGP_NODShiLtJ_G0037202.1 mouse_genomes_project 13 45058488 45058597 - Gm26064 snRNA snRNA MGP_NODShiLtJ_T0098810.1 MGP_NODShiLtJ_G0037204.1 mouse_genomes_project 13 46802364 46802468 - Gm23104 snRNA snRNA MGP_NODShiLtJ_T0036061.1 MGP_NODShiLtJ_G0020088.1 mouse_genomes_project 13 11962519 11963893 - MGP_NODShiLtJ_P0036061 Gm18856 protein_coding protein_coding MGP_NODShiLtJ_T0036389.1 MGP_NODShiLtJ_G0020254.1 mouse_genomes_project 13 30359153 30475929 + MGP_NODShiLtJ_P0036389 Mboat1 protein_coding protein_coding MGP_NODShiLtJ_T0036390.1 MGP_NODShiLtJ_G0020254.1 mouse_genomes_project 13 30359186 30460164 + MGP_NODShiLtJ_P0036390 Mboat1 protein_coding protein_coding MGP_NODShiLtJ_T0036391.1 MGP_NODShiLtJ_G0020254.1 mouse_genomes_project 13 30359201 30386236 + Mboat1 protein_coding processed_transcript MGP_NODShiLtJ_T0036455.1 MGP_NODShiLtJ_G0020286.1 mouse_genomes_project 13 34796480 34824891 + MGP_NODShiLtJ_P0036455 Nqo2 protein_coding protein_coding MGP_NODShiLtJ_T0036456.1 MGP_NODShiLtJ_G0020286.1 mouse_genomes_project 13 34796480 34824891 + MGP_NODShiLtJ_P0036456 Nqo2 protein_coding protein_coding MGP_NODShiLtJ_T0000869.1 MGP_NODShiLtJ_G0000798.1 mouse_genomes_project 13 98361764 98362583 + TEC TEC MGP_NODShiLtJ_T0036215.1 MGP_NODShiLtJ_G0020161.1 mouse_genomes_project 13 21252248 21253151 - MGP_NODShiLtJ_P0036215 Vmn1r192 protein_coding protein_coding MGP_NODShiLtJ_T0009859.1 MGP_NODShiLtJ_G0007992.1 mouse_genomes_project 13 73285418 73285538 - Gm44375 miRNA miRNA MGP_NODShiLtJ_T0037904.1 MGP_NODShiLtJ_G0020774.1 mouse_genomes_project 13 123447965 123504680 - MGP_NODShiLtJ_P0037904 Ddx4 protein_coding protein_coding MGP_NODShiLtJ_T0037905.1 MGP_NODShiLtJ_G0020774.1 mouse_genomes_project 13 123447965 123504680 - MGP_NODShiLtJ_P0037905 Ddx4 protein_coding protein_coding MGP_NODShiLtJ_T0037811.1 MGP_NODShiLtJ_G0020750.1 mouse_genomes_project 13 115037881 115193618 - MGP_NODShiLtJ_P0037811 Rnf180 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037812.1 MGP_NODShiLtJ_G0020750.1 mouse_genomes_project 13 115059475 115193618 - MGP_NODShiLtJ_P0037812 Rnf180 protein_coding protein_coding MGP_NODShiLtJ_T0006527.1 MGP_NODShiLtJ_G0005401.1 mouse_genomes_project 13 61167172 61168088 + 1700066J03Rik lincRNA lincRNA MGP_NODShiLtJ_T0012775.1 MGP_NODShiLtJ_G0010883.1 mouse_genomes_project 13 23597886 23598485 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036546.1 MGP_NODShiLtJ_G0020324.1 mouse_genomes_project 13 42555045 42563610 - MGP_NODShiLtJ_P0036546 Gcm2 protein_coding protein_coding MGP_NODShiLtJ_T0098795.1 MGP_NODShiLtJ_G0037189.1 mouse_genomes_project 13 16437564 16437671 - Gm24018 snRNA snRNA MGP_NODShiLtJ_T0037535.1 MGP_NODShiLtJ_G0020658.1 mouse_genomes_project 13 101368282 101381726 + MGP_NODShiLtJ_P0037535 Mtx3 protein_coding protein_coding MGP_NODShiLtJ_T0037604.1 MGP_NODShiLtJ_G0020684.1 mouse_genomes_project 13 104953935 104954784 + Gm17190 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0037605.1 MGP_NODShiLtJ_G0020684.1 mouse_genomes_project 13 104954039 104955113 + MGP_NODShiLtJ_P0037605 Gm17190 protein_coding protein_coding MGP_NODShiLtJ_T0098794.1 MGP_NODShiLtJ_G0037188.1 mouse_genomes_project 13 15742042 15742149 + Gm25020 snRNA snRNA MGP_NODShiLtJ_T0037300.1 MGP_NODShiLtJ_G0020591.1 mouse_genomes_project 13 78044263 78074223 - MGP_NODShiLtJ_P0037300 Nkd2 protein_coding protein_coding MGP_NODShiLtJ_T0037301.1 MGP_NODShiLtJ_G0020591.1 mouse_genomes_project 13 78045401 78074204 - MGP_NODShiLtJ_P0037301 Nkd2 protein_coding protein_coding MGP_NODShiLtJ_T0037302.1 MGP_NODShiLtJ_G0020591.1 mouse_genomes_project 13 78049244 78074204 - Nkd2 protein_coding retained_intron MGP_NODShiLtJ_T0036400.1 MGP_NODShiLtJ_G0020259.1 mouse_genomes_project 13 31090776 31235422 - MGP_NODShiLtJ_P0036400 Exoc2 protein_coding protein_coding MGP_NODShiLtJ_T0036401.1 MGP_NODShiLtJ_G0020259.1 mouse_genomes_project 13 31090776 31261295 - MGP_NODShiLtJ_P0036401 Exoc2 protein_coding protein_coding MGP_NODShiLtJ_T0036911.1 MGP_NODShiLtJ_G0020438.1 mouse_genomes_project 13 58251389 58260278 + MGP_NODShiLtJ_P0036911 Prr7 protein_coding protein_coding MGP_NODShiLtJ_T0012769.1 MGP_NODShiLtJ_G0010877.1 mouse_genomes_project 13 21909774 21910206 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036563.1 MGP_NODShiLtJ_G0020333.1 mouse_genomes_project 13 43587279 43730152 + MGP_NODShiLtJ_P0036563 Hivep1 protein_coding protein_coding MGP_NODShiLtJ_T0037348.1 MGP_NODShiLtJ_G0020613.1 mouse_genomes_project 13 80485142 80517745 + MGP_NODShiLtJ_P0037348 Spata9 protein_coding protein_coding MGP_NODShiLtJ_T0037073.1 MGP_NODShiLtJ_G0020484.1 mouse_genomes_project 13 62882942 62897258 - MGP_NODShiLtJ_P0037073 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037074.1 MGP_NODShiLtJ_G0020484.1 mouse_genomes_project 13 62887920 62897330 - protein_coding retained_intron MGP_NODShiLtJ_T0009849.1 MGP_NODShiLtJ_G0007982.1 mouse_genomes_project 13 58296562 58296630 - Mir6945 miRNA miRNA MGP_NODShiLtJ_T0003384.1 MGP_NODShiLtJ_G0003102.1 mouse_genomes_project 13 21929249 21930065 + Gm11314 antisense antisense MGP_NODShiLtJ_T0036480.1 MGP_NODShiLtJ_G0020297.1 mouse_genomes_project 13 35837309 35871660 - MGP_NODShiLtJ_P0036480 Eci3 protein_coding protein_coding MGP_NODShiLtJ_T0036481.1 MGP_NODShiLtJ_G0020297.1 mouse_genomes_project 13 35838779 35871638 - MGP_NODShiLtJ_P0036481 Eci3 protein_coding protein_coding MGP_NODShiLtJ_T0037125.1 MGP_NODShiLtJ_G0020510.1 mouse_genomes_project 13 67035952 67094951 - MGP_NODShiLtJ_P0037125 Ptch1 protein_coding protein_coding MGP_NODShiLtJ_T0037126.1 MGP_NODShiLtJ_G0020510.1 mouse_genomes_project 13 67035953 67102897 - MGP_NODShiLtJ_P0037126 Ptch1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037127.1 MGP_NODShiLtJ_G0020510.1 mouse_genomes_project 13 67041382 67042113 - Ptch1 protein_coding retained_intron MGP_NODShiLtJ_T0037128.1 MGP_NODShiLtJ_G0020510.1 mouse_genomes_project 13 67045686 67093246 - MGP_NODShiLtJ_P0037128 Ptch1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037129.1 MGP_NODShiLtJ_G0020510.1 mouse_genomes_project 13 67071497 67094705 - MGP_NODShiLtJ_P0037129 Ptch1 protein_coding protein_coding MGP_NODShiLtJ_T0037130.1 MGP_NODShiLtJ_G0020510.1 mouse_genomes_project 13 67071497 67093757 - MGP_NODShiLtJ_P0037130 Ptch1 protein_coding protein_coding MGP_NODShiLtJ_T0037131.1 MGP_NODShiLtJ_G0020510.1 mouse_genomes_project 13 67071497 67103035 - MGP_NODShiLtJ_P0037131 Ptch1 protein_coding protein_coding MGP_NODShiLtJ_T0012809.1 MGP_NODShiLtJ_G0010917.1 mouse_genomes_project 13 67516532 67517176 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036075.1 MGP_NODShiLtJ_G0020090.1 mouse_genomes_project 13 12051313 12065247 - MGP_NODShiLtJ_P0036075 Ggps1 protein_coding protein_coding MGP_NODShiLtJ_T0012806.1 MGP_NODShiLtJ_G0010914.1 mouse_genomes_project 13 63964808 63965174 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036877.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852193 57884265 + MGP_NODShiLtJ_P0036877 Zfp346 protein_coding protein_coding MGP_NODShiLtJ_T0036878.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852196 57871641 + MGP_NODShiLtJ_P0036878 Zfp346 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036879.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852199 57881599 + MGP_NODShiLtJ_P0036879 Zfp346 protein_coding protein_coding MGP_NODShiLtJ_T0036880.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852217 57881917 + MGP_NODShiLtJ_P0036880 Zfp346 protein_coding protein_coding MGP_NODShiLtJ_T0036881.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852218 57881967 + MGP_NODShiLtJ_P0036881 Zfp346 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036882.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852218 57879817 + MGP_NODShiLtJ_P0036882 Zfp346 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036883.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852222 57881708 + MGP_NODShiLtJ_P0036883 Zfp346 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036884.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852224 57881800 + MGP_NODShiLtJ_P0036884 Zfp346 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036885.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57852284 57881587 + MGP_NODShiLtJ_P0036885 Zfp346 protein_coding protein_coding MGP_NODShiLtJ_T0036886.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57861298 57862181 + Zfp346 protein_coding retained_intron MGP_NODShiLtJ_T0036887.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57871178 57881568 + Zfp346 protein_coding retained_intron MGP_NODShiLtJ_T0036888.1 MGP_NODShiLtJ_G0020425.1 mouse_genomes_project 13 57879440 57881842 + Zfp346 protein_coding retained_intron MGP_NODShiLtJ_T0006473.1 MGP_NODShiLtJ_G0005365.1 mouse_genomes_project 13 31605367 31704397 + Gm11376 lincRNA lincRNA MGP_NODShiLtJ_T0101633.1 MGP_NODShiLtJ_G0039802.1 mouse_genomes_project 13 33525826 33553513 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098812.1 MGP_NODShiLtJ_G0037206.1 mouse_genomes_project 13 48863127 48863231 + Gm22960 snRNA snRNA MGP_NODShiLtJ_T0037369.1 MGP_NODShiLtJ_G0020620.1 mouse_genomes_project 13 81787486 82302273 + MGP_NODShiLtJ_P0037369 2210408I21Rik protein_coding protein_coding MGP_NODShiLtJ_T0037245.1 MGP_NODShiLtJ_G0020566.1 mouse_genomes_project 13 71861565 71862163 + MGP_NODShiLtJ_P0037245 BC048507 protein_coding protein_coding MGP_NODShiLtJ_T0036246.1 MGP_NODShiLtJ_G0020189.1 mouse_genomes_project 13 22782392 22792195 - MGP_NODShiLtJ_P0036246 Btn1a1 protein_coding protein_coding MGP_NODShiLtJ_T0036247.1 MGP_NODShiLtJ_G0020189.1 mouse_genomes_project 13 22790067 22792221 - MGP_NODShiLtJ_P0036247 Btn1a1 protein_coding protein_coding MGP_NODShiLtJ_T0036138.1 MGP_NODShiLtJ_G0020118.1 mouse_genomes_project 13 20109872 20110936 - MGP_NODShiLtJ_P0036138 Olfr1368 protein_coding protein_coding MGP_NODShiLtJ_T0036139.1 MGP_NODShiLtJ_G0020118.1 mouse_genomes_project 13 20110498 20114200 - MGP_NODShiLtJ_P0036139 Olfr1368 protein_coding protein_coding MGP_NODShiLtJ_T0012842.1 MGP_NODShiLtJ_G0010950.1 mouse_genomes_project 13 122103993 122104237 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006478.1 MGP_NODShiLtJ_G0005369.1 mouse_genomes_project 13 31685667 31716719 - Gm11375 lincRNA lincRNA MGP_NODShiLtJ_T0006479.1 MGP_NODShiLtJ_G0005369.1 mouse_genomes_project 13 31715204 31716761 - Gm11375 lincRNA lincRNA MGP_NODShiLtJ_T0036275.1 MGP_NODShiLtJ_G0020211.1 mouse_genomes_project 13 23182737 23199359 + Slc17a2 protein_coding retained_intron MGP_NODShiLtJ_T0036276.1 MGP_NODShiLtJ_G0020211.1 mouse_genomes_project 13 23182771 23201143 + MGP_NODShiLtJ_P0036276 Slc17a2 protein_coding protein_coding MGP_NODShiLtJ_T0036277.1 MGP_NODShiLtJ_G0020211.1 mouse_genomes_project 13 23182789 23199130 + Slc17a2 protein_coding retained_intron MGP_NODShiLtJ_T0036278.1 MGP_NODShiLtJ_G0020211.1 mouse_genomes_project 13 23182792 23198711 + MGP_NODShiLtJ_P0036278 Slc17a2 protein_coding protein_coding MGP_NODShiLtJ_T0036099.1 MGP_NODShiLtJ_G0020101.1 mouse_genomes_project 13 16316868 16433071 - MGP_NODShiLtJ_P0036099 Cdk13 protein_coding protein_coding MGP_NODShiLtJ_T0037906.1 MGP_NODShiLtJ_G0020775.1 mouse_genomes_project 13 123516198 123599964 + MGP_NODShiLtJ_P0037906 Slc38a9 protein_coding protein_coding MGP_NODShiLtJ_T0009861.1 MGP_NODShiLtJ_G0007994.1 mouse_genomes_project 13 80150979 80151075 + Mir682 miRNA miRNA MGP_NODShiLtJ_T0100065.1 MGP_NODShiLtJ_G0038459.1 mouse_genomes_project 13 61354667 61354809 + Gm24284 snoRNA snoRNA MGP_NODShiLtJ_T0009833.1 MGP_NODShiLtJ_G0007966.1 mouse_genomes_project 13 23115646 23115784 + Gm44314 miRNA miRNA MGP_NODShiLtJ_T0037665.1 MGP_NODShiLtJ_G0020703.1 mouse_genomes_project 13 107484010 107486472 + MGP_NODShiLtJ_P0037665 Foxd1 protein_coding protein_coding MGP_NODShiLtJ_T0036975.1 MGP_NODShiLtJ_G0020463.1 mouse_genomes_project 13 59585159 59618774 + MGP_NODShiLtJ_P0036975 Smad5 protein_coding protein_coding MGP_NODShiLtJ_T0036976.1 MGP_NODShiLtJ_G0020463.1 mouse_genomes_project 13 59585188 59609622 + Smad5 protein_coding processed_transcript MGP_NODShiLtJ_T0036977.1 MGP_NODShiLtJ_G0020463.1 mouse_genomes_project 13 59585201 59616357 + MGP_NODShiLtJ_P0036977 Smad5 protein_coding protein_coding MGP_NODShiLtJ_T0036978.1 MGP_NODShiLtJ_G0020463.1 mouse_genomes_project 13 59585215 59609533 + Smad5 protein_coding processed_transcript MGP_NODShiLtJ_T0036979.1 MGP_NODShiLtJ_G0020463.1 mouse_genomes_project 13 59587185 59616701 + MGP_NODShiLtJ_P0036979 Smad5 protein_coding protein_coding MGP_NODShiLtJ_T0036980.1 MGP_NODShiLtJ_G0020463.1 mouse_genomes_project 13 59609424 59615395 + Smad5 protein_coding processed_transcript MGP_NODShiLtJ_T0036949.1 MGP_NODShiLtJ_G0020450.1 mouse_genomes_project 13 58537203 58591811 + MGP_NODShiLtJ_P0036949 Pcbd2 protein_coding protein_coding MGP_NODShiLtJ_T0036950.1 MGP_NODShiLtJ_G0020450.1 mouse_genomes_project 13 58537203 58591809 + MGP_NODShiLtJ_P0036950 Pcbd2 protein_coding protein_coding MGP_NODShiLtJ_T0036694.1 MGP_NODShiLtJ_G0020375.1 mouse_genomes_project 13 51620825 51665136 + MGP_NODShiLtJ_P0036694 Ippk protein_coding protein_coding MGP_NODShiLtJ_T0037706.1 MGP_NODShiLtJ_G0020719.1 mouse_genomes_project 13 109421810 109504302 - MGP_NODShiLtJ_P0037706 Naip2 protein_coding protein_coding MGP_NODShiLtJ_T0037707.1 MGP_NODShiLtJ_G0020719.1 mouse_genomes_project 13 109421810 109499363 - MGP_NODShiLtJ_P0037707 Naip2 protein_coding protein_coding MGP_NODShiLtJ_T0037708.1 MGP_NODShiLtJ_G0020719.1 mouse_genomes_project 13 109421978 109504173 - MGP_NODShiLtJ_P0037708 Naip2 protein_coding protein_coding MGP_NODShiLtJ_T0006462.1 MGP_NODShiLtJ_G0005358.1 mouse_genomes_project 13 25931294 25961812 - 1700092E19Rik lincRNA lincRNA MGP_NODShiLtJ_T0006463.1 MGP_NODShiLtJ_G0005358.1 mouse_genomes_project 13 25955190 25961753 - 1700092E19Rik lincRNA lincRNA MGP_NODShiLtJ_T0037570.1 MGP_NODShiLtJ_G0020672.1 mouse_genomes_project 13 103633990 103647978 + MGP_NODShiLtJ_P0037570 Otp protein_coding protein_coding MGP_NODShiLtJ_T0037571.1 MGP_NODShiLtJ_G0020672.1 mouse_genomes_project 13 103644917 103645874 + Otp protein_coding processed_transcript MGP_NODShiLtJ_T0036890.1 MGP_NODShiLtJ_G0020427.1 mouse_genomes_project 13 57905274 57921773 + MGP_NODShiLtJ_P0036890 Fgfr4 protein_coding protein_coding MGP_NODShiLtJ_T0036891.1 MGP_NODShiLtJ_G0020427.1 mouse_genomes_project 13 57908310 57909297 + Fgfr4 protein_coding processed_transcript MGP_NODShiLtJ_T0036892.1 MGP_NODShiLtJ_G0020427.1 mouse_genomes_project 13 57908758 57909546 + Fgfr4 protein_coding retained_intron MGP_NODShiLtJ_T0012800.1 MGP_NODShiLtJ_G0010908.1 mouse_genomes_project 13 35829303 35830289 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037777.1 MGP_NODShiLtJ_G0020736.1 mouse_genomes_project 13 113415492 113438158 - MGP_NODShiLtJ_P0037777 Srek1 protein_coding protein_coding MGP_NODShiLtJ_T0011236.1 MGP_NODShiLtJ_G0009369.1 mouse_genomes_project 13 11246093 11246357 + Gm24065 misc_RNA misc_RNA MGP_NODShiLtJ_T0037178.1 MGP_NODShiLtJ_G0020533.1 mouse_genomes_project 13 70672583 70688942 + MGP_NODShiLtJ_P0037178 Gm10767 protein_coding protein_coding MGP_NODShiLtJ_T0037179.1 MGP_NODShiLtJ_G0020533.1 mouse_genomes_project 13 70673084 70688857 + MGP_NODShiLtJ_P0037179 Gm10767 protein_coding protein_coding MGP_NODShiLtJ_T0100045.1 MGP_NODShiLtJ_G0038439.1 mouse_genomes_project 13 9085902 9086022 - Gm25496 snoRNA snoRNA MGP_NODShiLtJ_T0100061.1 MGP_NODShiLtJ_G0038455.1 mouse_genomes_project 13 51943289 51943411 + Gm23482 snoRNA snoRNA MGP_NODShiLtJ_T0012785.1 MGP_NODShiLtJ_G0010893.1 mouse_genomes_project 13 26658520 26658826 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036421.1 MGP_NODShiLtJ_G0020272.1 mouse_genomes_project 13 33484521 33498380 + MGP_NODShiLtJ_P0036421 Serpinb6b protein_coding protein_coding MGP_NODShiLtJ_T0036422.1 MGP_NODShiLtJ_G0020272.1 mouse_genomes_project 13 33484756 33498375 + MGP_NODShiLtJ_P0036422 Serpinb6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036423.1 MGP_NODShiLtJ_G0020272.1 mouse_genomes_project 13 33484815 33498375 + Serpinb6b protein_coding processed_transcript MGP_NODShiLtJ_T0036587.1 MGP_NODShiLtJ_G0020341.1 mouse_genomes_project 13 45181153 45202449 - MGP_NODShiLtJ_P0036587 Mcur1 protein_coding protein_coding MGP_NODShiLtJ_T0036837.1 MGP_NODShiLtJ_G0020417.1 mouse_genomes_project 13 57386154 57439878 + MGP_NODShiLtJ_P0036837 Cdhr2 protein_coding protein_coding MGP_NODShiLtJ_T0002452.1 MGP_NODShiLtJ_G0002359.1 mouse_genomes_project 13 18166457 18166518 + MGP_NODShiLtJ_P0002452 Trgj4 TR_J_gene TR_J_gene MGP_NODShiLtJ_T0036997.1 MGP_NODShiLtJ_G0020467.1 mouse_genomes_project 13 61140660 61143793 - MGP_NODShiLtJ_P0036997 Hnrnpa0 protein_coding protein_coding MGP_NODShiLtJ_T0037161.1 MGP_NODShiLtJ_G0020523.1 mouse_genomes_project 13 68658200 68663174 + MGP_NODShiLtJ_P0037161 Spata31d1c protein_coding protein_coding MGP_NODShiLtJ_T0036558.1 MGP_NODShiLtJ_G0020331.1 mouse_genomes_project 13 43149533 43150361 + MGP_NODShiLtJ_P0036558 Gm5082 protein_coding protein_coding MGP_NODShiLtJ_T0009826.1 MGP_NODShiLtJ_G0007959.1 mouse_genomes_project 13 20713327 20714671 - miRNA miRNA MGP_NODShiLtJ_T0009866.1 MGP_NODShiLtJ_G0007999.1 mouse_genomes_project 13 102454310 102454371 + Mir5624 miRNA miRNA MGP_NODShiLtJ_T0011247.1 MGP_NODShiLtJ_G0009380.1 mouse_genomes_project 13 59587390 59587515 + Gm27834 misc_RNA misc_RNA MGP_NODShiLtJ_T0100060.1 MGP_NODShiLtJ_G0038454.1 mouse_genomes_project 13 51915125 51915258 + Gm25394 snoRNA snoRNA MGP_NODShiLtJ_T0011235.1 MGP_NODShiLtJ_G0009368.1 mouse_genomes_project 13 10450718 10451016 + Gm23081 misc_RNA misc_RNA MGP_NODShiLtJ_T0037098.1 MGP_NODShiLtJ_G0020504.1 mouse_genomes_project 13 65991273 65993839 - MGP_NODShiLtJ_P0037098 protein_coding protein_coding MGP_NODShiLtJ_T0036373.1 MGP_NODShiLtJ_G0020249.1 mouse_genomes_project 13 27832176 27839262 + MGP_NODShiLtJ_P0036373 Prl2a1 protein_coding protein_coding MGP_NODShiLtJ_T0037177.1 MGP_NODShiLtJ_G0020532.1 mouse_genomes_project 13 70670381 70688894 + MGP_NODShiLtJ_P0037177 protein_coding protein_coding MGP_NODShiLtJ_T0037479.1 MGP_NODShiLtJ_G0020641.1 mouse_genomes_project 13 99201936 99227233 - MGP_NODShiLtJ_P0037479 Atp6ap1l protein_coding protein_coding MGP_NODShiLtJ_T0037480.1 MGP_NODShiLtJ_G0020641.1 mouse_genomes_project 13 99201940 99227248 - MGP_NODShiLtJ_P0037480 Atp6ap1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037481.1 MGP_NODShiLtJ_G0020641.1 mouse_genomes_project 13 99220391 99227276 - Atp6ap1l protein_coding processed_transcript MGP_NODShiLtJ_T0006502.1 MGP_NODShiLtJ_G0005386.1 mouse_genomes_project 13 47829410 47830666 + 5033430I15Rik lincRNA lincRNA MGP_NODShiLtJ_T0006503.1 MGP_NODShiLtJ_G0005386.1 mouse_genomes_project 13 47829508 47830335 + 5033430I15Rik lincRNA lincRNA MGP_NODShiLtJ_T0003442.1 MGP_NODShiLtJ_G0003138.1 mouse_genomes_project 13 104010223 104010623 + antisense antisense MGP_NODShiLtJ_T0101631.1 MGP_NODShiLtJ_G0039800.1 mouse_genomes_project 13 27670752 27678504 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011254.1 MGP_NODShiLtJ_G0009387.1 mouse_genomes_project 13 118933736 118933932 - Gm28016 misc_RNA misc_RNA MGP_NODShiLtJ_T0012762.1 MGP_NODShiLtJ_G0010870.1 mouse_genomes_project 13 20953613 20955936 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097932.1 MGP_NODShiLtJ_G0036344.1 mouse_genomes_project 13 113048819 113048924 + n-R5s56 rRNA rRNA MGP_NODShiLtJ_T0037896.1 MGP_NODShiLtJ_G0020772.1 mouse_genomes_project 13 123299807 123347564 + MGP_NODShiLtJ_P0037896 Il6st protein_coding protein_coding MGP_NODShiLtJ_T0037897.1 MGP_NODShiLtJ_G0020772.1 mouse_genomes_project 13 123299838 123320357 + MGP_NODShiLtJ_P0037897 Il6st protein_coding protein_coding MGP_NODShiLtJ_T0037898.1 MGP_NODShiLtJ_G0020772.1 mouse_genomes_project 13 123299967 123342794 + MGP_NODShiLtJ_P0037898 Il6st protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037899.1 MGP_NODShiLtJ_G0020772.1 mouse_genomes_project 13 123303318 123315747 + MGP_NODShiLtJ_P0037899 Il6st protein_coding protein_coding MGP_NODShiLtJ_T0037900.1 MGP_NODShiLtJ_G0020772.1 mouse_genomes_project 13 123310769 123342008 + MGP_NODShiLtJ_P0037900 Il6st protein_coding protein_coding MGP_NODShiLtJ_T0037901.1 MGP_NODShiLtJ_G0020772.1 mouse_genomes_project 13 123310769 123342008 + MGP_NODShiLtJ_P0037901 Il6st protein_coding protein_coding MGP_NODShiLtJ_T0037902.1 MGP_NODShiLtJ_G0020772.1 mouse_genomes_project 13 123310769 123342694 + MGP_NODShiLtJ_P0037902 Il6st protein_coding protein_coding MGP_NODShiLtJ_T0003408.1 MGP_NODShiLtJ_G0003121.1 mouse_genomes_project 13 61307886 61327605 + Gm26555 antisense antisense MGP_NODShiLtJ_T0003409.1 MGP_NODShiLtJ_G0003121.1 mouse_genomes_project 13 61307886 61325048 + Gm26555 antisense antisense MGP_NODShiLtJ_T0003410.1 MGP_NODShiLtJ_G0003121.1 mouse_genomes_project 13 61307894 61327606 + Gm26555 antisense antisense MGP_NODShiLtJ_T0037597.1 MGP_NODShiLtJ_G0020679.1 mouse_genomes_project 13 104336306 104349776 - MGP_NODShiLtJ_P0037597 F2rl1 protein_coding protein_coding MGP_NODShiLtJ_T0037822.1 MGP_NODShiLtJ_G0020753.1 mouse_genomes_project 13 117241025 117255741 + MGP_NODShiLtJ_P0037822 Dimt1 protein_coding protein_coding MGP_NODShiLtJ_T0100069.1 MGP_NODShiLtJ_G0038463.1 mouse_genomes_project 13 80273495 80273625 + Gm23127 snoRNA snoRNA MGP_NODShiLtJ_T0037280.1 MGP_NODShiLtJ_G0020584.1 mouse_genomes_project 13 77668577 77718816 + MGP_NODShiLtJ_P0037280 Lpcat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037281.1 MGP_NODShiLtJ_G0020584.1 mouse_genomes_project 13 77668577 77718816 + MGP_NODShiLtJ_P0037281 Lpcat1 protein_coding protein_coding MGP_NODShiLtJ_T0037282.1 MGP_NODShiLtJ_G0020584.1 mouse_genomes_project 13 77668611 77717506 + MGP_NODShiLtJ_P0037282 Lpcat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037283.1 MGP_NODShiLtJ_G0020584.1 mouse_genomes_project 13 77668803 77703832 + Lpcat1 protein_coding retained_intron MGP_NODShiLtJ_T0037284.1 MGP_NODShiLtJ_G0020584.1 mouse_genomes_project 13 77705234 77716235 + Lpcat1 protein_coding retained_intron MGP_NODShiLtJ_T0037285.1 MGP_NODShiLtJ_G0020584.1 mouse_genomes_project 13 77713343 77714001 + Lpcat1 protein_coding retained_intron MGP_NODShiLtJ_T0100047.1 MGP_NODShiLtJ_G0038441.1 mouse_genomes_project 13 11186074 11186262 + Gm25804 snoRNA snoRNA MGP_NODShiLtJ_T0012773.1 MGP_NODShiLtJ_G0010881.1 mouse_genomes_project 13 22696462 22696618 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037912.1 MGP_NODShiLtJ_G0020780.1 mouse_genomes_project 13 123875898 123882420 + MGP_NODShiLtJ_P0037912 Mcidas protein_coding protein_coding MGP_NODShiLtJ_T0037531.1 MGP_NODShiLtJ_G0020655.1 mouse_genomes_project 13 101083700 101085302 - MGP_NODShiLtJ_P0037531 Spz1 protein_coding protein_coding MGP_NODShiLtJ_T0037678.1 MGP_NODShiLtJ_G0020709.1 mouse_genomes_project 13 108208574 108209055 - MGP_NODShiLtJ_P0037678 1700024P04Rik protein_coding protein_coding MGP_NODShiLtJ_T0006522.1 MGP_NODShiLtJ_G0005397.1 mouse_genomes_project 13 57636906 57638150 + 5330429C05Rik lincRNA lincRNA MGP_NODShiLtJ_T0037832.1 MGP_NODShiLtJ_G0020756.1 mouse_genomes_project 13 118093192 118265995 - MGP_NODShiLtJ_P0037832 Zswim6 protein_coding protein_coding MGP_NODShiLtJ_T0009831.1 MGP_NODShiLtJ_G0007964.1 mouse_genomes_project 13 21152937 21153031 - Gm26300 miRNA miRNA MGP_NODShiLtJ_T0006585.1 MGP_NODShiLtJ_G0005444.1 mouse_genomes_project 13 130453751 130508886 + lincRNA lincRNA MGP_NODShiLtJ_T0006586.1 MGP_NODShiLtJ_G0005444.1 mouse_genomes_project 13 130454543 130508808 + lincRNA lincRNA MGP_NODShiLtJ_T0006587.1 MGP_NODShiLtJ_G0005444.1 mouse_genomes_project 13 130454559 130508811 + lincRNA lincRNA MGP_NODShiLtJ_T0000854.1 MGP_NODShiLtJ_G0000784.1 mouse_genomes_project 13 38688231 38688572 - TEC TEC MGP_NODShiLtJ_T0036537.1 MGP_NODShiLtJ_G0020321.1 mouse_genomes_project 13 42452676 42464891 + MGP_NODShiLtJ_P0036537 Pak1ip1 protein_coding protein_coding MGP_NODShiLtJ_T0036538.1 MGP_NODShiLtJ_G0020321.1 mouse_genomes_project 13 42452677 42460494 + Pak1ip1 protein_coding retained_intron MGP_NODShiLtJ_T0036539.1 MGP_NODShiLtJ_G0020321.1 mouse_genomes_project 13 42452891 42464883 + Pak1ip1 protein_coding retained_intron MGP_NODShiLtJ_T0036540.1 MGP_NODShiLtJ_G0020321.1 mouse_genomes_project 13 42452913 42460143 + Pak1ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0036541.1 MGP_NODShiLtJ_G0020321.1 mouse_genomes_project 13 42452919 42464895 + Pak1ip1 protein_coding retained_intron MGP_NODShiLtJ_T0036248.1 MGP_NODShiLtJ_G0020190.1 mouse_genomes_project 13 22804024 22814949 - MGP_NODShiLtJ_P0036248 Btn2a2 protein_coding protein_coding MGP_NODShiLtJ_T0036249.1 MGP_NODShiLtJ_G0020190.1 mouse_genomes_project 13 22804024 22814966 - MGP_NODShiLtJ_P0036249 Btn2a2 protein_coding protein_coding MGP_NODShiLtJ_T0036250.1 MGP_NODShiLtJ_G0020190.1 mouse_genomes_project 13 22804235 22814956 - MGP_NODShiLtJ_P0036250 Btn2a2 protein_coding protein_coding MGP_NODShiLtJ_T0012755.1 MGP_NODShiLtJ_G0010863.1 mouse_genomes_project 13 15580227 15581185 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037247.1 MGP_NODShiLtJ_G0020568.1 mouse_genomes_project 13 72409020 72419071 + MGP_NODShiLtJ_P0037247 Fastkd3 protein_coding protein_coding MGP_NODShiLtJ_T0035955.1 MGP_NODShiLtJ_G0020060.1 mouse_genomes_project 13 2847926 2857308 + MGP_NODShiLtJ_P0035955 Klf6 protein_coding protein_coding MGP_NODShiLtJ_T0101599.1 MGP_NODShiLtJ_G0039768.1 mouse_genomes_project 13 21152862 21153184 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037150.1 MGP_NODShiLtJ_G0020515.1 mouse_genomes_project 13 67742900 67767374 + MGP_NODShiLtJ_P0037150 Habp4 protein_coding protein_coding MGP_NODShiLtJ_T0012781.1 MGP_NODShiLtJ_G0010889.1 mouse_genomes_project 13 25071067 25072507 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0037084.1 MGP_NODShiLtJ_G0020492.1 mouse_genomes_project 13 64096301 64099639 - MGP_NODShiLtJ_P0037084 Ctla2b protein_coding protein_coding MGP_NODShiLtJ_T0037085.1 MGP_NODShiLtJ_G0020492.1 mouse_genomes_project 13 64096301 64099639 - MGP_NODShiLtJ_P0037085 Ctla2b protein_coding protein_coding MGP_NODShiLtJ_T0100046.1 MGP_NODShiLtJ_G0038440.1 mouse_genomes_project 13 11186031 11186262 + Gm25483 snoRNA snoRNA MGP_NODShiLtJ_T0006497.1 MGP_NODShiLtJ_G0005383.1 mouse_genomes_project 13 45823479 45827493 + Gm5083 lincRNA lincRNA MGP_NODShiLtJ_T0006498.1 MGP_NODShiLtJ_G0005383.1 mouse_genomes_project 13 45823606 45827493 + Gm5083 lincRNA lincRNA MGP_NODShiLtJ_T0012827.1 MGP_NODShiLtJ_G0010935.1 mouse_genomes_project 13 90563492 90564457 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036520.1 MGP_NODShiLtJ_G0020312.1 mouse_genomes_project 13 39427015 39452483 + MGP_NODShiLtJ_P0036520 Snrnp48 protein_coding protein_coding MGP_NODShiLtJ_T0036521.1 MGP_NODShiLtJ_G0020312.1 mouse_genomes_project 13 39427027 39451742 + MGP_NODShiLtJ_P0036521 Snrnp48 protein_coding protein_coding MGP_NODShiLtJ_T0006456.1 MGP_NODShiLtJ_G0005353.1 mouse_genomes_project 13 22748580 22751632 - C230035I16Rik lincRNA lincRNA MGP_NODShiLtJ_T0006457.1 MGP_NODShiLtJ_G0005353.1 mouse_genomes_project 13 22748712 22751436 - C230035I16Rik lincRNA lincRNA MGP_NODShiLtJ_T0036218.1 MGP_NODShiLtJ_G0020164.1 mouse_genomes_project 13 21343428 21344379 + MGP_NODShiLtJ_P0036218 Vmn1r195 protein_coding protein_coding MGP_NODShiLtJ_T0037533.1 MGP_NODShiLtJ_G0020657.1 mouse_genomes_project 13 101273972 101318879 - MGP_NODShiLtJ_P0037533 Thbs4 protein_coding protein_coding MGP_NODShiLtJ_T0037534.1 MGP_NODShiLtJ_G0020657.1 mouse_genomes_project 13 101295094 101296908 - Thbs4 protein_coding retained_intron MGP_NODShiLtJ_T0098796.1 MGP_NODShiLtJ_G0037190.1 mouse_genomes_project 13 19794481 19794605 + Gm25605 snRNA snRNA MGP_NODShiLtJ_T0035929.1 MGP_NODShiLtJ_G0020045.1 mouse_genomes_project 13 431921 436455 + MGP_NODShiLtJ_P0035929 Calm4 protein_coding protein_coding MGP_NODShiLtJ_T0012836.1 MGP_NODShiLtJ_G0010944.1 mouse_genomes_project 13 110184826 110185135 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009865.1 MGP_NODShiLtJ_G0007998.1 mouse_genomes_project 13 99058420 99058530 + Gm44338 miRNA miRNA MGP_NODShiLtJ_T0006495.1 MGP_NODShiLtJ_G0005381.1 mouse_genomes_project 13 42840584 42851167 + Gm26877 lincRNA lincRNA MGP_NODShiLtJ_T0036711.1 MGP_NODShiLtJ_G0020383.1 mouse_genomes_project 13 52152090 52157569 - MGP_NODShiLtJ_P0036711 Gm8674 protein_coding protein_coding MGP_NODShiLtJ_T0036085.1 MGP_NODShiLtJ_G0020092.1 mouse_genomes_project 13 12258279 12614363 - MGP_NODShiLtJ_P0036085 Hecw1 protein_coding protein_coding MGP_NODShiLtJ_T0037746.1 MGP_NODShiLtJ_G0020733.1 mouse_genomes_project 13 111227997 111319754 - MGP_NODShiLtJ_P0037746 Pik3r1 protein_coding protein_coding MGP_NODShiLtJ_T0037747.1 MGP_NODShiLtJ_G0020733.1 mouse_genomes_project 13 111231098 111241445 - MGP_NODShiLtJ_P0037747 Pik3r1 protein_coding protein_coding MGP_NODShiLtJ_T0037748.1 MGP_NODShiLtJ_G0020733.1 mouse_genomes_project 13 111235010 111241391 - MGP_NODShiLtJ_P0037748 Pik3r1 protein_coding protein_coding MGP_NODShiLtJ_T0037749.1 MGP_NODShiLtJ_G0020733.1 mouse_genomes_project 13 111236468 111243411 - MGP_NODShiLtJ_P0037749 Pik3r1 protein_coding protein_coding MGP_NODShiLtJ_T0037750.1 MGP_NODShiLtJ_G0020733.1 mouse_genomes_project 13 111238949 111241158 - Pik3r1 protein_coding retained_intron MGP_NODShiLtJ_T0037751.1 MGP_NODShiLtJ_G0020733.1 mouse_genomes_project 13 111250259 111250915 - Pik3r1 protein_coding retained_intron MGP_NODShiLtJ_T0037752.1 MGP_NODShiLtJ_G0020733.1 mouse_genomes_project 13 111307030 111319750 - Pik3r1 protein_coding retained_intron MGP_NODShiLtJ_T0036487.1 MGP_NODShiLtJ_G0020299.1 mouse_genomes_project 13 36643148 36878453 + MGP_NODShiLtJ_P0036487 Cdyl protein_coding protein_coding MGP_NODShiLtJ_T0036488.1 MGP_NODShiLtJ_G0020299.1 mouse_genomes_project 13 36742128 36878447 + MGP_NODShiLtJ_P0036488 Cdyl protein_coding protein_coding MGP_NODShiLtJ_T0036419.1 MGP_NODShiLtJ_G0020271.1 mouse_genomes_project 13 33380482 33404595 - MGP_NODShiLtJ_P0036419 Serpinb1c protein_coding protein_coding MGP_NODShiLtJ_T0036420.1 MGP_NODShiLtJ_G0020271.1 mouse_genomes_project 13 33382656 33404572 - MGP_NODShiLtJ_P0036420 Serpinb1c protein_coding protein_coding MGP_NODShiLtJ_T0012835.1 MGP_NODShiLtJ_G0010943.1 mouse_genomes_project 13 106472291 106474264 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036581.1 MGP_NODShiLtJ_G0020336.1 mouse_genomes_project 13 44768559 44788872 - MGP_NODShiLtJ_P0036581 Tbc1d7 protein_coding protein_coding MGP_NODShiLtJ_T0036582.1 MGP_NODShiLtJ_G0020336.1 mouse_genomes_project 13 44768559 44788872 - MGP_NODShiLtJ_P0036582 Tbc1d7 protein_coding protein_coding MGP_NODShiLtJ_T0011242.1 MGP_NODShiLtJ_G0009375.1 mouse_genomes_project 13 47095476 47095819 - Gm23755 misc_RNA misc_RNA MGP_NODShiLtJ_T0036185.1 MGP_NODShiLtJ_G0020141.1 mouse_genomes_project 13 20737314 20738976 + MGP_NODShiLtJ_P0036185 Hist1h4j protein_coding protein_coding MGP_NODShiLtJ_T0036214.1 MGP_NODShiLtJ_G0020160.1 mouse_genomes_project 13 21160753 21161679 + MGP_NODShiLtJ_P0036214 protein_coding protein_coding MGP_NODShiLtJ_T0036550.1 MGP_NODShiLtJ_G0020326.1 mouse_genomes_project 13 42640747 42678512 - MGP_NODShiLtJ_P0036550 Elovl2 protein_coding protein_coding MGP_NODShiLtJ_T0036551.1 MGP_NODShiLtJ_G0020326.1 mouse_genomes_project 13 42640751 42678225 - MGP_NODShiLtJ_P0036551 Elovl2 protein_coding protein_coding MGP_NODShiLtJ_T0012778.1 MGP_NODShiLtJ_G0010886.1 mouse_genomes_project 13 23820032 23820367 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003420.1 MGP_NODShiLtJ_G0003127.1 mouse_genomes_project 13 73438047 73439009 - antisense antisense MGP_NODShiLtJ_T0012840.1 MGP_NODShiLtJ_G0010948.1 mouse_genomes_project 13 116823627 116823873 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036239.1 MGP_NODShiLtJ_G0020185.1 mouse_genomes_project 13 22428241 22430465 - MGP_NODShiLtJ_P0036239 Vmn1r220 protein_coding protein_coding MGP_NODShiLtJ_T0101645.1 MGP_NODShiLtJ_G0039814.1 mouse_genomes_project 13 61439322 61441173 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0037975.1 MGP_NODShiLtJ_G0020809.1 mouse_genomes_project 13 131778536 131812096 + MGP_NODShiLtJ_P0037975 Ccl28 protein_coding protein_coding MGP_NODShiLtJ_T0006474.1 MGP_NODShiLtJ_G0005366.1 mouse_genomes_project 13 31638553 31639729 - Gm11373 lincRNA lincRNA MGP_NODShiLtJ_T0006496.1 MGP_NODShiLtJ_G0005382.1 mouse_genomes_project 13 43583970 43584898 + Gm28707 lincRNA lincRNA MGP_NODShiLtJ_T0037155.1 MGP_NODShiLtJ_G0020517.1 mouse_genomes_project 13 67877393 67900289 - MGP_NODShiLtJ_P0037155 Aaed1 protein_coding protein_coding MGP_NODShiLtJ_T0100068.1 MGP_NODShiLtJ_G0038462.1 mouse_genomes_project 13 80195054 80195137 + Gm23012 snoRNA snoRNA MGP_NODShiLtJ_T0037453.1 MGP_NODShiLtJ_G0020635.1 mouse_genomes_project 13 96508431 97102556 + MGP_NODShiLtJ_P0037453 Edil3 protein_coding protein_coding MGP_NODShiLtJ_T0037454.1 MGP_NODShiLtJ_G0020635.1 mouse_genomes_project 13 96508447 96980183 + Edil3 protein_coding processed_transcript MGP_NODShiLtJ_T0037455.1 MGP_NODShiLtJ_G0020635.1 mouse_genomes_project 13 96508470 97272170 + MGP_NODShiLtJ_P0037455 Edil3 protein_coding protein_coding MGP_NODShiLtJ_T0037456.1 MGP_NODShiLtJ_G0020635.1 mouse_genomes_project 13 96508516 96764736 + Edil3 protein_coding retained_intron MGP_NODShiLtJ_T0037457.1 MGP_NODShiLtJ_G0020635.1 mouse_genomes_project 13 96508519 96519289 + Edil3 protein_coding processed_transcript MGP_NODShiLtJ_T0037458.1 MGP_NODShiLtJ_G0020635.1 mouse_genomes_project 13 96508573 96855840 + Edil3 protein_coding retained_intron MGP_NODShiLtJ_T0037459.1 MGP_NODShiLtJ_G0020635.1 mouse_genomes_project 13 96508577 96924123 + Edil3 protein_coding retained_intron MGP_NODShiLtJ_T0037460.1 MGP_NODShiLtJ_G0020635.1 mouse_genomes_project 13 96508601 97272170 + MGP_NODShiLtJ_P0037460 Edil3 protein_coding protein_coding MGP_NODShiLtJ_T0036043.1 MGP_NODShiLtJ_G0020079.1 mouse_genomes_project 13 10165644 10182903 - MGP_NODShiLtJ_P0036043 Lgals8 protein_coding protein_coding MGP_NODShiLtJ_T0036044.1 MGP_NODShiLtJ_G0020079.1 mouse_genomes_project 13 10165649 10173690 - Lgals8 protein_coding retained_intron MGP_NODShiLtJ_T0036045.1 MGP_NODShiLtJ_G0020079.1 mouse_genomes_project 13 10167077 10185183 - MGP_NODShiLtJ_P0036045 Lgals8 protein_coding protein_coding MGP_NODShiLtJ_T0036046.1 MGP_NODShiLtJ_G0020079.1 mouse_genomes_project 13 10175116 10180223 - Lgals8 protein_coding retained_intron MGP_NODShiLtJ_T0036047.1 MGP_NODShiLtJ_G0020079.1 mouse_genomes_project 13 10176437 10178714 - Lgals8 protein_coding retained_intron MGP_NODShiLtJ_T0036048.1 MGP_NODShiLtJ_G0020079.1 mouse_genomes_project 13 10182958 10184735 - Lgals8 protein_coding processed_transcript MGP_NODShiLtJ_T0037201.1 MGP_NODShiLtJ_G0020540.1 mouse_genomes_project 13 70921435 70940660 + MGP_NODShiLtJ_P0037201 Zfp759 protein_coding protein_coding MGP_NODShiLtJ_T0009846.1 MGP_NODShiLtJ_G0007979.1 mouse_genomes_project 13 57247894 57248031 + Gm24195 miRNA miRNA MGP_NODShiLtJ_T0006480.1 MGP_NODShiLtJ_G0005370.1 mouse_genomes_project 13 31885904 31894700 + Gm11377 lincRNA lincRNA MGP_NODShiLtJ_T0036435.1 MGP_NODShiLtJ_G0020282.1 mouse_genomes_project 13 34465822 34478483 + MGP_NODShiLtJ_P0036435 Serpinb6d protein_coding protein_coding MGP_NODShiLtJ_T0006519.1 MGP_NODShiLtJ_G0005394.1 mouse_genomes_project 13 55961245 55972014 - Gm43262 lincRNA lincRNA MGP_NODShiLtJ_T0037246.1 MGP_NODShiLtJ_G0020567.1 mouse_genomes_project 13 72385404 72408892 - MGP_NODShiLtJ_P0037246 Mtrr protein_coding protein_coding MGP_NODShiLtJ_T0035940.1 MGP_NODShiLtJ_G0020053.1 mouse_genomes_project 13 860432 883851 + MGP_NODShiLtJ_P0035940 Akr1c19 protein_coding protein_coding MGP_NODShiLtJ_T0035941.1 MGP_NODShiLtJ_G0020053.1 mouse_genomes_project 13 865494 883850 + MGP_NODShiLtJ_P0035941 Akr1c19 protein_coding protein_coding MGP_NODShiLtJ_T0035942.1 MGP_NODShiLtJ_G0020053.1 mouse_genomes_project 13 878702 884172 + Akr1c19 protein_coding processed_transcript MGP_NODShiLtJ_T0098806.1 MGP_NODShiLtJ_G0037200.1 mouse_genomes_project 13 43068967 43069133 - Gm24819 snRNA snRNA MGP_NODShiLtJ_T0098792.1 MGP_NODShiLtJ_G0037186.1 mouse_genomes_project 13 12770681 12770794 - Gm25444 snRNA snRNA MGP_NODShiLtJ_T0097755.1 MGP_NODShiLtJ_G0036167.1 mouse_genomes_project 13 452872 453446 + pseudogene pseudogene MGP_NODShiLtJ_T0036682.1 MGP_NODShiLtJ_G0020372.1 mouse_genomes_project 13 51412754 51430162 - MGP_NODShiLtJ_P0036682 Susd3 protein_coding protein_coding MGP_NODShiLtJ_T0036683.1 MGP_NODShiLtJ_G0020372.1 mouse_genomes_project 13 51412893 51430574 - MGP_NODShiLtJ_P0036683 Susd3 protein_coding protein_coding MGP_NODShiLtJ_T0036684.1 MGP_NODShiLtJ_G0020372.1 mouse_genomes_project 13 51413367 51430531 - MGP_NODShiLtJ_P0036684 Susd3 protein_coding protein_coding MGP_NODShiLtJ_T0036685.1 MGP_NODShiLtJ_G0020372.1 mouse_genomes_project 13 51419542 51422476 - Susd3 protein_coding processed_transcript MGP_NODShiLtJ_T0036686.1 MGP_NODShiLtJ_G0020372.1 mouse_genomes_project 13 51419844 51430022 - MGP_NODShiLtJ_P0036686 Susd3 protein_coding protein_coding MGP_NODShiLtJ_T0036687.1 MGP_NODShiLtJ_G0020372.1 mouse_genomes_project 13 51420761 51424758 - Susd3 protein_coding processed_transcript MGP_NODShiLtJ_T0101602.1 MGP_NODShiLtJ_G0039771.1 mouse_genomes_project 13 21466378 21467264 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012833.1 MGP_NODShiLtJ_G0010941.1 mouse_genomes_project 13 101874231 101875609 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036644.1 MGP_NODShiLtJ_G0020360.1 mouse_genomes_project 13 49058932 49073417 - Dek protein_coding processed_transcript MGP_NODShiLtJ_T0036645.1 MGP_NODShiLtJ_G0020360.1 mouse_genomes_project 13 49058939 49082656 - MGP_NODShiLtJ_P0036645 Dek protein_coding protein_coding MGP_NODShiLtJ_T0036646.1 MGP_NODShiLtJ_G0020360.1 mouse_genomes_project 13 49063569 49082667 - MGP_NODShiLtJ_P0036646 Dek protein_coding protein_coding MGP_NODShiLtJ_T0036647.1 MGP_NODShiLtJ_G0020360.1 mouse_genomes_project 13 49073133 49082296 - MGP_NODShiLtJ_P0036647 Dek protein_coding protein_coding MGP_NODShiLtJ_T0036648.1 MGP_NODShiLtJ_G0020360.1 mouse_genomes_project 13 49076454 49082620 - Dek protein_coding processed_transcript MGP_NODShiLtJ_T0036649.1 MGP_NODShiLtJ_G0020360.1 mouse_genomes_project 13 49081851 49082649 - Dek protein_coding processed_transcript MGP_NODShiLtJ_T0036203.1 MGP_NODShiLtJ_G0020153.1 mouse_genomes_project 13 21036738 21045348 + MGP_NODShiLtJ_P0036203 Pom121l2 protein_coding protein_coding MGP_NODShiLtJ_T0036204.1 MGP_NODShiLtJ_G0020153.1 mouse_genomes_project 13 21037064 21040024 + MGP_NODShiLtJ_P0036204 Pom121l2 protein_coding protein_coding MGP_NODShiLtJ_T0036228.1 MGP_NODShiLtJ_G0020174.1 mouse_genomes_project 13 21747626 21748673 - MGP_NODShiLtJ_P0036228 Vmn1r209 protein_coding protein_coding MGP_NODShiLtJ_T0101638.1 MGP_NODShiLtJ_G0039807.1 mouse_genomes_project 13 34487750 34490802 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036236.1 MGP_NODShiLtJ_G0020182.1 mouse_genomes_project 13 22344315 22345212 - MGP_NODShiLtJ_P0036236 Vmn1r217 protein_coding protein_coding MGP_NODShiLtJ_T0009863.1 MGP_NODShiLtJ_G0007996.1 mouse_genomes_project 13 88539172 88539231 - Mir3961 miRNA miRNA MGP_NODShiLtJ_T0006547.1 MGP_NODShiLtJ_G0005416.1 mouse_genomes_project 13 89850689 89858285 - Gm26803 lincRNA lincRNA MGP_NODShiLtJ_T0100066.1 MGP_NODShiLtJ_G0038460.1 mouse_genomes_project 13 68815933 68816084 + Gm24130 snoRNA snoRNA MGP_NODShiLtJ_T0036681.1 MGP_NODShiLtJ_G0020371.1 mouse_genomes_project 13 51382835 51396986 - MGP_NODShiLtJ_P0036681 Card19 protein_coding protein_coding MGP_NODShiLtJ_T0036739.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54129381 54242420 - MGP_NODShiLtJ_P0036739 Sema4d protein_coding protein_coding MGP_NODShiLtJ_T0036740.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54129381 54242346 - MGP_NODShiLtJ_P0036740 Sema4d protein_coding protein_coding MGP_NODShiLtJ_T0036741.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54129385 54174444 - MGP_NODShiLtJ_P0036741 Sema4d protein_coding protein_coding MGP_NODShiLtJ_T0036742.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54143705 54146352 - Sema4d protein_coding retained_intron MGP_NODShiLtJ_T0036743.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54159239 54192305 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0036744.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54159239 54192201 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0036745.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54160807 54195543 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0036746.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54160854 54199206 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0036747.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54160874 54201380 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0036748.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54160897 54201244 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0036749.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54160924 54192112 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0036750.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54160973 54223853 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0036751.1 MGP_NODShiLtJ_G0020394.1 mouse_genomes_project 13 54161006 54242337 - Sema4d protein_coding processed_transcript MGP_NODShiLtJ_T0012821.1 MGP_NODShiLtJ_G0010929.1 mouse_genomes_project 13 81298479 81298899 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012786.1 MGP_NODShiLtJ_G0010894.1 mouse_genomes_project 13 27120824 27121165 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036688.1 MGP_NODShiLtJ_G0020373.1 mouse_genomes_project 13 51444283 51495892 - MGP_NODShiLtJ_P0036688 Fgd3 protein_coding protein_coding MGP_NODShiLtJ_T0036689.1 MGP_NODShiLtJ_G0020373.1 mouse_genomes_project 13 51445839 51484508 - MGP_NODShiLtJ_P0036689 Fgd3 protein_coding protein_coding MGP_NODShiLtJ_T0036690.1 MGP_NODShiLtJ_G0020373.1 mouse_genomes_project 13 51457705 51506904 - MGP_NODShiLtJ_P0036690 Fgd3 protein_coding protein_coding MGP_NODShiLtJ_T0036780.1 MGP_NODShiLtJ_G0020403.1 mouse_genomes_project 13 56096084 56096441 + MGP_NODShiLtJ_P0036780 Gm5449 protein_coding protein_coding MGP_NODShiLtJ_T0036696.1 MGP_NODShiLtJ_G0020377.1 mouse_genomes_project 13 51709034 51738324 + MGP_NODShiLtJ_P0036696 Ecm2 protein_coding protein_coding MGP_NODShiLtJ_T0037709.1 MGP_NODShiLtJ_G0020720.1 mouse_genomes_project 13 109474748 109567565 - MGP_NODShiLtJ_P0037709 Naip6 protein_coding protein_coding MGP_NODShiLtJ_T0036090.1 MGP_NODShiLtJ_G0020096.1 mouse_genomes_project 13 13732890 14011656 + MGP_NODShiLtJ_P0036090 Gli3 protein_coding protein_coding MGP_NODShiLtJ_T0036091.1 MGP_NODShiLtJ_G0020096.1 mouse_genomes_project 13 13732906 13933908 + Gli3 protein_coding processed_transcript MGP_NODShiLtJ_T0036092.1 MGP_NODShiLtJ_G0020096.1 mouse_genomes_project 13 13733378 13956151 + Gli3 protein_coding retained_intron MGP_NODShiLtJ_T0036093.1 MGP_NODShiLtJ_G0020096.1 mouse_genomes_project 13 13733635 14026583 + MGP_NODShiLtJ_P0036093 Gli3 protein_coding protein_coding MGP_NODShiLtJ_T0036184.1 MGP_NODShiLtJ_G0020140.1 mouse_genomes_project 13 20713057 20715327 + MGP_NODShiLtJ_P0036184 protein_coding protein_coding MGP_NODShiLtJ_T0036989.1 MGP_NODShiLtJ_G0020465.1 mouse_genomes_project 13 60384437 60888571 - MGP_NODShiLtJ_P0036989 Spock1 protein_coding protein_coding MGP_NODShiLtJ_T0036990.1 MGP_NODShiLtJ_G0020465.1 mouse_genomes_project 13 60384449 60888532 - MGP_NODShiLtJ_P0036990 Spock1 protein_coding protein_coding MGP_NODShiLtJ_T0036991.1 MGP_NODShiLtJ_G0020465.1 mouse_genomes_project 13 60389336 60888532 - MGP_NODShiLtJ_P0036991 Spock1 protein_coding protein_coding MGP_NODShiLtJ_T0036992.1 MGP_NODShiLtJ_G0020465.1 mouse_genomes_project 13 60391947 60888548 - MGP_NODShiLtJ_P0036992 Spock1 protein_coding protein_coding MGP_NODShiLtJ_T0036993.1 MGP_NODShiLtJ_G0020465.1 mouse_genomes_project 13 60392532 60887844 - MGP_NODShiLtJ_P0036993 Spock1 protein_coding protein_coding MGP_NODShiLtJ_T0036994.1 MGP_NODShiLtJ_G0020465.1 mouse_genomes_project 13 60397648 60888556 - Spock1 protein_coding retained_intron MGP_NODShiLtJ_T0037021.1 MGP_NODShiLtJ_G0020474.1 mouse_genomes_project 13 61433980 61442533 + MGP_NODShiLtJ_P0037021 Rmi1 protein_coding protein_coding MGP_NODShiLtJ_T0036327.1 MGP_NODShiLtJ_G0020222.1 mouse_genomes_project 13 24229940 24242293 + MGP_NODShiLtJ_P0036327 BC005537 protein_coding protein_coding MGP_NODShiLtJ_T0036328.1 MGP_NODShiLtJ_G0020222.1 mouse_genomes_project 13 24230303 24240943 + MGP_NODShiLtJ_P0036328 BC005537 protein_coding protein_coding MGP_NODShiLtJ_T0036237.1 MGP_NODShiLtJ_G0020183.1 mouse_genomes_project 13 22380306 22381203 + MGP_NODShiLtJ_P0036237 Vmn1r218 protein_coding protein_coding MGP_NODShiLtJ_T0036371.1 MGP_NODShiLtJ_G0020247.1 mouse_genomes_project 13 27631263 27643144 - MGP_NODShiLtJ_P0036371 Prl7a2 protein_coding protein_coding MGP_NODShiLtJ_T0097756.1 MGP_NODShiLtJ_G0036168.1 mouse_genomes_project 13 11352723 11353130 - pseudogene pseudogene MGP_NODShiLtJ_T0036269.1 MGP_NODShiLtJ_G0020205.1 mouse_genomes_project 13 23114821 23123078 + MGP_NODShiLtJ_P0036269 Hist1h3b protein_coding protein_coding MGP_NODShiLtJ_T0037263.1 MGP_NODShiLtJ_G0020576.1 mouse_genomes_project 13 74576577 74627047 - MGP_NODShiLtJ_P0037263 Ice1 protein_coding protein_coding MGP_NODShiLtJ_T0000867.1 MGP_NODShiLtJ_G0000796.1 mouse_genomes_project 13 89864621 89869691 - TEC TEC MGP_NODShiLtJ_T0037954.1 MGP_NODShiLtJ_G0020801.1 mouse_genomes_project 13 129188974 129699483 + MGP_NODShiLtJ_P0037954 Hcn1 protein_coding protein_coding MGP_NODShiLtJ_T0003411.1 MGP_NODShiLtJ_G0003122.1 mouse_genomes_project 13 66848103 66855105 + Gm16133 antisense antisense MGP_NODShiLtJ_T0003412.1 MGP_NODShiLtJ_G0003122.1 mouse_genomes_project 13 66848176 66855102 + Gm16133 antisense antisense MGP_NODShiLtJ_T0009855.1 MGP_NODShiLtJ_G0007988.1 mouse_genomes_project 13 66815256 66815330 + Mir23b miRNA miRNA MGP_NODShiLtJ_T0036552.1 MGP_NODShiLtJ_G0020327.1 mouse_genomes_project 13 42710688 42737076 + MGP_NODShiLtJ_P0036552 Smim13 protein_coding protein_coding MGP_NODShiLtJ_T0037095.1 MGP_NODShiLtJ_G0020501.1 mouse_genomes_project 13 64604082 64609781 - MGP_NODShiLtJ_P0037095 Cts7 protein_coding protein_coding MGP_NODShiLtJ_T0036760.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55352508 55438386 - MGP_NODShiLtJ_P0036760 Auh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036761.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55352508 55448798 - MGP_NODShiLtJ_P0036761 Auh protein_coding protein_coding MGP_NODShiLtJ_T0036762.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55358258 55448595 - MGP_NODShiLtJ_P0036762 Auh protein_coding protein_coding MGP_NODShiLtJ_T0036763.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55405114 55448785 - Auh protein_coding retained_intron MGP_NODShiLtJ_T0036764.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55414286 55448789 - MGP_NODShiLtJ_P0036764 Auh protein_coding protein_coding MGP_NODShiLtJ_T0036765.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55415071 55443027 - Auh protein_coding processed_transcript MGP_NODShiLtJ_T0036766.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55425427 55448791 - MGP_NODShiLtJ_P0036766 Auh protein_coding protein_coding MGP_NODShiLtJ_T0036767.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55427275 55443006 - Auh protein_coding processed_transcript MGP_NODShiLtJ_T0036768.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55427286 55438422 - Auh protein_coding processed_transcript MGP_NODShiLtJ_T0036769.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55428587 55448818 - MGP_NODShiLtJ_P0036769 Auh protein_coding protein_coding MGP_NODShiLtJ_T0036770.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55432016 55443030 - Auh protein_coding processed_transcript MGP_NODShiLtJ_T0036771.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55437927 55443022 - Auh protein_coding retained_intron MGP_NODShiLtJ_T0036772.1 MGP_NODShiLtJ_G0020398.1 mouse_genomes_project 13 55447624 55448789 - Auh protein_coding processed_transcript MGP_NODShiLtJ_T0017237.1 MGP_NODShiLtJ_G0015128.1 mouse_genomes_project 13 73515508 73519912 - Gm17108 processed_transcript processed_transcript MGP_NODShiLtJ_T0035928.1 MGP_NODShiLtJ_G0020044.1 mouse_genomes_project 13 394329 395755 - MGP_NODShiLtJ_P0035928 Calml3 protein_coding protein_coding MGP_NODShiLtJ_T0036908.1 MGP_NODShiLtJ_G0020437.1 mouse_genomes_project 13 58231838 58246059 + MGP_NODShiLtJ_P0036908 Grk6 protein_coding protein_coding MGP_NODShiLtJ_T0036909.1 MGP_NODShiLtJ_G0020437.1 mouse_genomes_project 13 58231838 58248007 + MGP_NODShiLtJ_P0036909 Grk6 protein_coding protein_coding MGP_NODShiLtJ_T0036910.1 MGP_NODShiLtJ_G0020437.1 mouse_genomes_project 13 58232013 58246319 + MGP_NODShiLtJ_P0036910 Grk6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037728.1 MGP_NODShiLtJ_G0020726.1 mouse_genomes_project 13 110042218 110064615 + MGP_NODShiLtJ_P0037728 protein_coding protein_coding MGP_NODShiLtJ_T0037729.1 MGP_NODShiLtJ_G0020726.1 mouse_genomes_project 13 110042601 110045798 + protein_coding retained_intron MGP_NODShiLtJ_T0037730.1 MGP_NODShiLtJ_G0020726.1 mouse_genomes_project 13 110042865 110045876 + protein_coding retained_intron MGP_NODShiLtJ_T0101054.1 MGP_NODShiLtJ_G0039420.1 mouse_genomes_project 13 34870498 34874583 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101055.1 MGP_NODShiLtJ_G0039420.1 mouse_genomes_project 13 34871915 34872472 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0009848.1 MGP_NODShiLtJ_G0007981.1 mouse_genomes_project 13 58264803 58264899 - Mir6944 miRNA miRNA MGP_NODShiLtJ_T0101629.1 MGP_NODShiLtJ_G0039798.1 mouse_genomes_project 13 23115637 23115971 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0036261.1 MGP_NODShiLtJ_G0020199.1 mouse_genomes_project 13 23043963 23054716 + MGP_NODShiLtJ_P0036261 Hist1h2bc protein_coding protein_coding MGP_NODShiLtJ_T0006561.1 MGP_NODShiLtJ_G0005425.1 mouse_genomes_project 13 106751033 106765507 - 5330416C01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006562.1 MGP_NODShiLtJ_G0005425.1 mouse_genomes_project 13 106752868 106761202 - 5330416C01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006563.1 MGP_NODShiLtJ_G0005425.1 mouse_genomes_project 13 106762789 106765475 - 5330416C01Rik lincRNA lincRNA MGP_NODShiLtJ_T0009876.1 MGP_NODShiLtJ_G0008009.1 mouse_genomes_project 13 123926711 123926802 + Mir449a miRNA miRNA MGP_NODShiLtJ_T0035956.1 MGP_NODShiLtJ_G0020061.1 mouse_genomes_project 13 3452960 3455467 + MGP_NODShiLtJ_P0035956 Gm28465 protein_coding protein_coding MGP_NODShiLtJ_T0036337.1 MGP_NODShiLtJ_G0020226.1 mouse_genomes_project 13 24345911 24379496 - MGP_NODShiLtJ_P0036337 Aldh5a1 protein_coding protein_coding MGP_NODShiLtJ_T0036755.1 MGP_NODShiLtJ_G0020397.1 mouse_genomes_project 13 55071600 55151747 + MGP_NODShiLtJ_P0036755 Syk protein_coding protein_coding MGP_NODShiLtJ_T0036756.1 MGP_NODShiLtJ_G0020397.1 mouse_genomes_project 13 55071861 55146557 + MGP_NODShiLtJ_P0036756 Syk protein_coding protein_coding MGP_NODShiLtJ_T0036757.1 MGP_NODShiLtJ_G0020397.1 mouse_genomes_project 13 55071927 55113670 + Syk protein_coding retained_intron MGP_NODShiLtJ_T0036758.1 MGP_NODShiLtJ_G0020397.1 mouse_genomes_project 13 55094514 55151737 + MGP_NODShiLtJ_P0036758 Syk protein_coding protein_coding MGP_NODShiLtJ_T0036759.1 MGP_NODShiLtJ_G0020397.1 mouse_genomes_project 13 55094620 55125757 + Syk protein_coding retained_intron MGP_NODShiLtJ_T0036272.1 MGP_NODShiLtJ_G0020208.1 mouse_genomes_project 13 23135886 23136420 - MGP_NODShiLtJ_P0036272 Hist1h3a protein_coding protein_coding MGP_NODShiLtJ_T0035933.1 MGP_NODShiLtJ_G0020048.1 mouse_genomes_project 13 528500 540293 + MGP_NODShiLtJ_P0035933 Tubal3 protein_coding protein_coding MGP_NODShiLtJ_T0037067.1 MGP_NODShiLtJ_G0020480.1 mouse_genomes_project 13 62803456 62810147 - MGP_NODShiLtJ_P0037067 4921517D22Rik protein_coding protein_coding MGP_NODShiLtJ_T0012780.1 MGP_NODShiLtJ_G0010888.1 mouse_genomes_project 13 24900905 24901613 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036590.1 MGP_NODShiLtJ_G0020343.1 mouse_genomes_project 13 45462612 45480642 + MGP_NODShiLtJ_P0036590 Cd83 protein_coding protein_coding MGP_NODShiLtJ_T0037372.1 MGP_NODShiLtJ_G0020622.1 mouse_genomes_project 13 82743500 82744893 + MGP_NODShiLtJ_P0037372 Pou5f2 protein_coding protein_coding MGP_NODShiLtJ_T0009822.1 MGP_NODShiLtJ_G0007955.1 mouse_genomes_project 13 6327504 6327607 - Gm22750 miRNA miRNA MGP_NODShiLtJ_T0097757.1 MGP_NODShiLtJ_G0036169.1 mouse_genomes_project 13 28954576 28954816 + pseudogene pseudogene MGP_NODShiLtJ_T0037852.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 118882704 119330026 + Pde4d protein_coding processed_transcript MGP_NODShiLtJ_T0037853.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 118882765 119329041 + Pde4d protein_coding processed_transcript MGP_NODShiLtJ_T0037854.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 119094462 120558233 + MGP_NODShiLtJ_P0037854 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037855.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 119329063 120558103 + MGP_NODShiLtJ_P0037855 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037856.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 119644148 119883940 + Pde4d protein_coding processed_transcript MGP_NODShiLtJ_T0037857.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 119644276 120365662 + Pde4d protein_coding retained_intron MGP_NODShiLtJ_T0037858.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 119644558 120558146 + MGP_NODShiLtJ_P0037858 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037859.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 119808656 120558123 + MGP_NODShiLtJ_P0037859 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037860.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 119999683 120558123 + MGP_NODShiLtJ_P0037860 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037861.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120160127 120558103 + MGP_NODShiLtJ_P0037861 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037862.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120216680 120558123 + MGP_NODShiLtJ_P0037862 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037863.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120282538 120558233 + MGP_NODShiLtJ_P0037863 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037864.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120282558 120365659 + Pde4d protein_coding retained_intron MGP_NODShiLtJ_T0037865.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120356052 120360425 + Pde4d protein_coding processed_transcript MGP_NODShiLtJ_T0037866.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120506500 120558146 + MGP_NODShiLtJ_P0037866 Pde4d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037867.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120506504 120560221 + MGP_NODShiLtJ_P0037867 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037868.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120526375 120545091 + Pde4d protein_coding retained_intron MGP_NODShiLtJ_T0037869.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120528518 120558103 + MGP_NODShiLtJ_P0037869 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037870.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120530284 120558123 + MGP_NODShiLtJ_P0037870 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0037871.1 MGP_NODShiLtJ_G0020762.1 mouse_genomes_project 13 120542206 120555101 + MGP_NODShiLtJ_P0037871 Pde4d protein_coding protein_coding MGP_NODShiLtJ_T0098817.1 MGP_NODShiLtJ_G0037211.1 mouse_genomes_project 13 85438291 85438419 + Gm24635 snRNA snRNA MGP_NODShiLtJ_T0011244.1 MGP_NODShiLtJ_G0009377.1 mouse_genomes_project 13 57073339 57073599 - Gm22668 misc_RNA misc_RNA MGP_NODShiLtJ_T0006472.1 MGP_NODShiLtJ_G0005364.1 mouse_genomes_project 13 31518985 31528458 - 4930401O12Rik lincRNA lincRNA MGP_NODShiLtJ_T0002536.1 MGP_NODShiLtJ_G0002437.1 mouse_genomes_project 13 17953413 17953946 + MGP_NODShiLtJ_P0002536 Tcrg-V4 TR_V_gene TR_V_gene MGP_NODShiLtJ_T0000870.1 MGP_NODShiLtJ_G0000799.1 mouse_genomes_project 13 98458700 98461561 + TEC TEC MGP_NODShiLtJ_T0036322.1 MGP_NODShiLtJ_G0020221.1 mouse_genomes_project 13 24176857 24186932 - MGP_NODShiLtJ_P0036322 Gmnn protein_coding protein_coding MGP_NODShiLtJ_T0036323.1 MGP_NODShiLtJ_G0020221.1 mouse_genomes_project 13 24176857 24186870 - MGP_NODShiLtJ_P0036323 Gmnn protein_coding protein_coding MGP_NODShiLtJ_T0036324.1 MGP_NODShiLtJ_G0020221.1 mouse_genomes_project 13 24177103 24186485 - MGP_NODShiLtJ_P0036324 Gmnn protein_coding protein_coding MGP_NODShiLtJ_T0036325.1 MGP_NODShiLtJ_G0020221.1 mouse_genomes_project 13 24177200 24186449 - MGP_NODShiLtJ_P0036325 Gmnn protein_coding protein_coding MGP_NODShiLtJ_T0036326.1 MGP_NODShiLtJ_G0020221.1 mouse_genomes_project 13 24178671 24186906 - MGP_NODShiLtJ_P0036326 Gmnn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009875.1 MGP_NODShiLtJ_G0008008.1 mouse_genomes_project 13 123926596 123926676 + Mir449b miRNA miRNA MGP_NODShiLtJ_T0036245.1 MGP_NODShiLtJ_G0020188.1 mouse_genomes_project 13 22742158 22744481 - MGP_NODShiLtJ_P0036245 Abt1 protein_coding protein_coding MGP_NODShiLtJ_T0037960.1 MGP_NODShiLtJ_G0020805.1 mouse_genomes_project 13 131380375 131477527 - MGP_NODShiLtJ_P0037960 Nnt protein_coding protein_coding MGP_NODShiLtJ_T0037961.1 MGP_NODShiLtJ_G0020805.1 mouse_genomes_project 13 131380375 131477527 - MGP_NODShiLtJ_P0037961 Nnt protein_coding protein_coding MGP_NODShiLtJ_T0037962.1 MGP_NODShiLtJ_G0020805.1 mouse_genomes_project 13 131380449 131460636 - MGP_NODShiLtJ_P0037962 Nnt protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037963.1 MGP_NODShiLtJ_G0020805.1 mouse_genomes_project 13 131399296 131477527 - MGP_NODShiLtJ_P0037963 Nnt protein_coding protein_coding MGP_NODShiLtJ_T0037964.1 MGP_NODShiLtJ_G0020805.1 mouse_genomes_project 13 131455346 131477527 - Nnt protein_coding processed_transcript MGP_NODShiLtJ_T0037965.1 MGP_NODShiLtJ_G0020805.1 mouse_genomes_project 13 131460938 131477527 - Nnt protein_coding processed_transcript MGP_NODShiLtJ_T0003416.1 MGP_NODShiLtJ_G0003124.1 mouse_genomes_project 13 70865381 71709946 + antisense antisense MGP_NODShiLtJ_T0003418.1 MGP_NODShiLtJ_G0003124.1 mouse_genomes_project 13 71678396 71712174 + antisense antisense MGP_NODShiLtJ_T0037809.1 MGP_NODShiLtJ_G0020748.1 mouse_genomes_project 13 114833187 114944655 - MGP_NODShiLtJ_P0037809 Rgs7bp protein_coding protein_coding MGP_NODShiLtJ_T0037093.1 MGP_NODShiLtJ_G0020499.1 mouse_genomes_project 13 64440646 64448927 - MGP_NODShiLtJ_P0037093 Cts6 protein_coding protein_coding MGP_NODShiLtJ_T0006520.1 MGP_NODShiLtJ_G0005395.1 mouse_genomes_project 13 57044793 57045036 - Gm16248 lincRNA lincRNA MGP_NODShiLtJ_T0036662.1 MGP_NODShiLtJ_G0020366.1 mouse_genomes_project 13 50806510 50810020 + MGP_NODShiLtJ_P0036662 Barx1 protein_coding protein_coding MGP_NODShiLtJ_T0037846.1 MGP_NODShiLtJ_G0020761.1 mouse_genomes_project 13 118735859 118810326 + MGP_NODShiLtJ_P0037846 Depdc1b protein_coding protein_coding MGP_NODShiLtJ_T0037847.1 MGP_NODShiLtJ_G0020761.1 mouse_genomes_project 13 118735895 118744005 + Depdc1b protein_coding retained_intron MGP_NODShiLtJ_T0037848.1 MGP_NODShiLtJ_G0020761.1 mouse_genomes_project 13 118735907 118822158 + MGP_NODShiLtJ_P0037848 Depdc1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037849.1 MGP_NODShiLtJ_G0020761.1 mouse_genomes_project 13 118735949 118809430 + MGP_NODShiLtJ_P0037849 Depdc1b protein_coding protein_coding MGP_NODShiLtJ_T0037850.1 MGP_NODShiLtJ_G0020761.1 mouse_genomes_project 13 118746055 118788902 + Depdc1b protein_coding processed_transcript MGP_NODShiLtJ_T0037851.1 MGP_NODShiLtJ_G0020761.1 mouse_genomes_project 13 118777286 118793984 + Depdc1b protein_coding retained_intron MGP_NODShiLtJ_T0006500.1 MGP_NODShiLtJ_G0005385.1 mouse_genomes_project 13 46157318 46176466 + 1700029N11Rik lincRNA lincRNA MGP_NODShiLtJ_T0006501.1 MGP_NODShiLtJ_G0005385.1 mouse_genomes_project 13 46157333 46176469 + 1700029N11Rik lincRNA lincRNA MGP_NODShiLtJ_T0036966.1 MGP_NODShiLtJ_G0020457.1 mouse_genomes_project 13 59219551 59222292 + MGP_NODShiLtJ_P0036966 Gm10782 protein_coding protein_coding MGP_NODShiLtJ_T0003431.1 MGP_NODShiLtJ_G0003132.1 mouse_genomes_project 13 90432954 90435548 - A230107N01Rik antisense antisense MGP_NODShiLtJ_T0003432.1 MGP_NODShiLtJ_G0003132.1 mouse_genomes_project 13 90433982 90435473 - A230107N01Rik antisense antisense MGP_NODShiLtJ_T0036062.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 11996853 12035162 - MGP_NODShiLtJ_P0036062 Tbce protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036063.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 11996855 12004406 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0036064.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 11996855 12000499 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0036065.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 11996856 12035221 - MGP_NODShiLtJ_P0036065 Tbce protein_coding protein_coding MGP_NODShiLtJ_T0036066.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 11996857 12035221 - MGP_NODShiLtJ_P0036066 Tbce protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036067.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 12001965 12035204 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0036068.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 12004090 12008745 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0036069.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 12004128 12007952 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0036070.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 12004135 12008738 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0036071.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 12004143 12008404 - Tbce protein_coding processed_transcript MGP_NODShiLtJ_T0036072.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 12009285 12035195 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0036073.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 12013239 12035179 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0036074.1 MGP_NODShiLtJ_G0020089.1 mouse_genomes_project 13 12018162 12035200 - Tbce protein_coding retained_intron MGP_NODShiLtJ_T0037527.1 MGP_NODShiLtJ_G0020654.1 mouse_genomes_project 13 100985402 101035240 - MGP_NODShiLtJ_P0037527 Zfyve16 protein_coding protein_coding MGP_NODShiLtJ_T0037528.1 MGP_NODShiLtJ_G0020654.1 mouse_genomes_project 13 100986844 101017130 - Zfyve16 protein_coding retained_intron MGP_NODShiLtJ_T0037529.1 MGP_NODShiLtJ_G0020654.1 mouse_genomes_project 13 101008338 101009652 - Zfyve16 protein_coding retained_intron MGP_NODShiLtJ_T0037530.1 MGP_NODShiLtJ_G0020654.1 mouse_genomes_project 13 101013842 101023580 - Zfyve16 protein_coding processed_transcript MGP_NODShiLtJ_T0037097.1 MGP_NODShiLtJ_G0020503.1 mouse_genomes_project 13 64831928 64841293 - MGP_NODShiLtJ_P0037097 Cts3 protein_coding protein_coding MGP_NODShiLtJ_T0009832.1 MGP_NODShiLtJ_G0007965.1 mouse_genomes_project 13 22849680 22849789 + n-TStga1 miRNA miRNA MGP_NODShiLtJ_T0100057.1 MGP_NODShiLtJ_G0038451.1 mouse_genomes_project 13 48710789 48710919 - Gm24620 snoRNA snoRNA MGP_NODShiLtJ_T0037903.1 MGP_NODShiLtJ_G0020773.1 mouse_genomes_project 13 123365651 123425819 - MGP_NODShiLtJ_P0037903 Il31ra protein_coding protein_coding MGP_NODShiLtJ_T0100073.1 MGP_NODShiLtJ_G0038467.1 mouse_genomes_project 13 82355753 82355884 + Gm26088 snoRNA snoRNA MGP_NODShiLtJ_T0036905.1 MGP_NODShiLtJ_G0020435.1 mouse_genomes_project 13 58185344 58185758 - MGP_NODShiLtJ_P0036905 Pfn3 protein_coding protein_coding MGP_NODShiLtJ_T0036368.1 MGP_NODShiLtJ_G0020245.1 mouse_genomes_project 13 27502302 27519066 - MGP_NODShiLtJ_P0036368 Prl8a1 protein_coding protein_coding MGP_NODShiLtJ_T0036369.1 MGP_NODShiLtJ_G0020245.1 mouse_genomes_project 13 27502812 27519066 - MGP_NODShiLtJ_P0036369 Prl8a1 protein_coding protein_coding MGP_NODShiLtJ_T0036060.1 MGP_NODShiLtJ_G0020087.1 mouse_genomes_project 13 11951457 11997973 + MGP_NODShiLtJ_P0036060 B3galnt2 protein_coding protein_coding MGP_NODShiLtJ_T0037475.1 MGP_NODShiLtJ_G0020639.1 mouse_genomes_project 13 98275151 98310547 + MGP_NODShiLtJ_P0037475 Tmem167 protein_coding protein_coding MGP_NODShiLtJ_T0037476.1 MGP_NODShiLtJ_G0020639.1 mouse_genomes_project 13 98275762 98347372 + MGP_NODShiLtJ_P0037476 Tmem167 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037477.1 MGP_NODShiLtJ_G0020639.1 mouse_genomes_project 13 98275790 98302953 + MGP_NODShiLtJ_P0037477 Tmem167 protein_coding protein_coding MGP_NODShiLtJ_T0036209.1 MGP_NODShiLtJ_G0020155.1 mouse_genomes_project 13 21105600 21106311 - MGP_NODShiLtJ_P0036209 Hist1h4i protein_coding protein_coding MGP_NODShiLtJ_T0037214.1 MGP_NODShiLtJ_G0020551.1 mouse_genomes_project 13 71287309 71318792 - MGP_NODShiLtJ_P0037214 protein_coding protein_coding MGP_NODShiLtJ_T0006567.1 MGP_NODShiLtJ_G0005429.1 mouse_genomes_project 13 108321899 108331837 + Gm807 lincRNA lincRNA MGP_NODShiLtJ_T0006578.1 MGP_NODShiLtJ_G0005439.1 mouse_genomes_project 13 122630273 122631788 + Gm15324 lincRNA lincRNA MGP_NODShiLtJ_T0037315.1 MGP_NODShiLtJ_G0020599.1 mouse_genomes_project 13 78408831 78460917 - MGP_NODShiLtJ_P0037315 Exoc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0037316.1 MGP_NODShiLtJ_G0020599.1 mouse_genomes_project 13 78408841 78460923 - MGP_NODShiLtJ_P0037316 Exoc3 protein_coding protein_coding MGP_NODShiLtJ_T0036823.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57362468 57371153 - MGP_NODShiLtJ_P0036823 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036824.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57362471 57367519 - MGP_NODShiLtJ_P0036824 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036825.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57362477 57376991 - MGP_NODShiLtJ_P0036825 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036826.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57362481 57371247 - MGP_NODShiLtJ_P0036826 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036827.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57365714 57367147 - Rnf44 protein_coding retained_intron MGP_NODShiLtJ_T0036828.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57366119 57376930 - MGP_NODShiLtJ_P0036828 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036829.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57366195 57370727 - MGP_NODShiLtJ_P0036829 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036830.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57366558 57367482 - Rnf44 protein_coding retained_intron MGP_NODShiLtJ_T0036831.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57366683 57371259 - MGP_NODShiLtJ_P0036831 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036832.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57366779 57371316 - MGP_NODShiLtJ_P0036832 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036833.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57367038 57376896 - MGP_NODShiLtJ_P0036833 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0036834.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57367104 57370326 - Rnf44 protein_coding processed_transcript MGP_NODShiLtJ_T0036835.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57367115 57376934 - Rnf44 protein_coding processed_transcript MGP_NODShiLtJ_T0036836.1 MGP_NODShiLtJ_G0020416.1 mouse_genomes_project 13 57367124 57371332 - MGP_NODShiLtJ_P0036836 Rnf44 protein_coding protein_coding MGP_NODShiLtJ_T0037733.1 MGP_NODShiLtJ_G0020729.1 mouse_genomes_project 13 110141026 110156663 - MGP_NODShiLtJ_P0037733 Mrps36 protein_coding protein_coding MGP_NODShiLtJ_T0037734.1 MGP_NODShiLtJ_G0020729.1 mouse_genomes_project 13 110144627 110156118 - Mrps36 protein_coding processed_transcript MGP_NODShiLtJ_T0037735.1 MGP_NODShiLtJ_G0020729.1 mouse_genomes_project 13 110155415 110156117 - Mrps36 protein_coding processed_transcript MGP_NODShiLtJ_T0036436.1 MGP_NODShiLtJ_G0020283.1 mouse_genomes_project 13 34659204 34670260 - MGP_NODShiLtJ_P0036436 Serpinb6e protein_coding protein_coding MGP_NODShiLtJ_T0036437.1 MGP_NODShiLtJ_G0020283.1 mouse_genomes_project 13 34667854 34670260 - MGP_NODShiLtJ_P0036437 Serpinb6e protein_coding protein_coding MGP_NODShiLtJ_T0036516.1 MGP_NODShiLtJ_G0020310.1 mouse_genomes_project 13 39238681 39263117 + MGP_NODShiLtJ_P0036516 Riok1 protein_coding protein_coding MGP_NODShiLtJ_T0035998.1 MGP_NODShiLtJ_G0020068.1 mouse_genomes_project 13 6364959 6381774 - MGP_NODShiLtJ_P0035998 protein_coding protein_coding MGP_NODShiLtJ_T0035935.1 MGP_NODShiLtJ_G0020050.1 mouse_genomes_project 13 666309 702112 + MGP_NODShiLtJ_P0035935 Akr1c14 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0035936.1 MGP_NODShiLtJ_G0020050.1 mouse_genomes_project 13 685432 702118 + Akr1c14 protein_coding processed_transcript MGP_NODShiLtJ_T0037632.1 MGP_NODShiLtJ_G0020693.1 mouse_genomes_project 13 106027874 106108608 + MGP_NODShiLtJ_P0037632 Fam169a protein_coding protein_coding MGP_NODShiLtJ_T0037633.1 MGP_NODShiLtJ_G0020693.1 mouse_genomes_project 13 106032022 106108608 + MGP_NODShiLtJ_P0037633 Fam169a protein_coding protein_coding MGP_NODShiLtJ_T0003400.1 MGP_NODShiLtJ_G0003115.1 mouse_genomes_project 13 51030291 51035660 + Phf2os1 antisense antisense MGP_NODShiLtJ_T0036948.1 MGP_NODShiLtJ_G0020449.1 mouse_genomes_project 13 58523505 58535007 + MGP_NODShiLtJ_P0036948 Txndc15 protein_coding protein_coding MGP_NODShiLtJ_T0006511.1 MGP_NODShiLtJ_G0005393.1 mouse_genomes_project 13 55946493 55951414 + Gm2762 lincRNA lincRNA MGP_NODShiLtJ_T0006512.1 MGP_NODShiLtJ_G0005393.1 mouse_genomes_project 13 55946509 56013756 + Gm2762 lincRNA lincRNA MGP_NODShiLtJ_T0006513.1 MGP_NODShiLtJ_G0005393.1 mouse_genomes_project 13 55946525 56016693 + Gm2762 lincRNA lincRNA MGP_NODShiLtJ_T0006514.1 MGP_NODShiLtJ_G0005393.1 mouse_genomes_project 13 55946933 55948173 + Gm2762 lincRNA lincRNA MGP_NODShiLtJ_T0006515.1 MGP_NODShiLtJ_G0005393.1 mouse_genomes_project 13 55947127 55954187 + Gm2762 lincRNA lincRNA MGP_NODShiLtJ_T0006516.1 MGP_NODShiLtJ_G0005393.1 mouse_genomes_project 13 55947127 55959747 + Gm2762 lincRNA lincRNA MGP_NODShiLtJ_T0006517.1 MGP_NODShiLtJ_G0005393.1 mouse_genomes_project 13 55948169 55954203 + Gm2762 lincRNA lincRNA MGP_NODShiLtJ_T0006518.1 MGP_NODShiLtJ_G0005393.1 mouse_genomes_project 13 55957561 55960228 + Gm2762 lincRNA lincRNA MGP_NODShiLtJ_T0009841.1 MGP_NODShiLtJ_G0007974.1 mouse_genomes_project 13 50671387 50671484 + Gm24111 miRNA miRNA MGP_NODShiLtJ_T0035973.1 MGP_NODShiLtJ_G0020065.1 mouse_genomes_project 13 5548381 6159473 + MGP_NODShiLtJ_P0035973 Adarb2 protein_coding protein_coding MGP_NODShiLtJ_T0035974.1 MGP_NODShiLtJ_G0020065.1 mouse_genomes_project 13 5548423 5693099 + MGP_NODShiLtJ_P0035974 Adarb2 protein_coding protein_coding MGP_NODShiLtJ_T0035975.1 MGP_NODShiLtJ_G0020065.1 mouse_genomes_project 13 5548428 6161151 + MGP_NODShiLtJ_P0035975 Adarb2 protein_coding protein_coding MGP_NODShiLtJ_T0035976.1 MGP_NODShiLtJ_G0020065.1 mouse_genomes_project 13 5927694 6159615 + MGP_NODShiLtJ_P0035976 Adarb2 protein_coding protein_coding MGP_NODShiLtJ_T0006475.1 MGP_NODShiLtJ_G0005367.1 mouse_genomes_project 13 31641899 31644092 - Gm11374 lincRNA lincRNA MGP_NODShiLtJ_T0037230.1 MGP_NODShiLtJ_G0020559.1 mouse_genomes_project 13 71651166 71673283 - MGP_NODShiLtJ_P0037230 Zfp65 protein_coding protein_coding MGP_NODShiLtJ_T0037231.1 MGP_NODShiLtJ_G0020559.1 mouse_genomes_project 13 71653629 71673317 - MGP_NODShiLtJ_P0037231 Zfp65 protein_coding protein_coding MGP_NODShiLtJ_T0036219.1 MGP_NODShiLtJ_G0020165.1 mouse_genomes_project 13 21359359 21360265 + MGP_NODShiLtJ_P0036219 Vmn1r196 protein_coding protein_coding MGP_NODShiLtJ_T0036565.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44266536 44754022 + MGP_NODShiLtJ_P0036565 Phactr1 protein_coding protein_coding MGP_NODShiLtJ_T0036566.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44266712 44557957 + Phactr1 protein_coding retained_intron MGP_NODShiLtJ_T0036567.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44267426 44750747 + MGP_NODShiLtJ_P0036567 Phactr1 protein_coding protein_coding MGP_NODShiLtJ_T0036568.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44268611 44750691 + MGP_NODShiLtJ_P0036568 Phactr1 protein_coding protein_coding MGP_NODShiLtJ_T0036569.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44296698 44750899 + MGP_NODShiLtJ_P0036569 Phactr1 protein_coding protein_coding MGP_NODShiLtJ_T0036570.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44297897 44754024 + MGP_NODShiLtJ_P0036570 Phactr1 protein_coding protein_coding MGP_NODShiLtJ_T0036571.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44462194 44750806 + MGP_NODShiLtJ_P0036571 Phactr1 protein_coding protein_coding MGP_NODShiLtJ_T0036572.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44462781 44555731 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036573.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44727675 44750881 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036574.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44738395 44750909 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036575.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44738410 44750857 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036576.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44741393 44750751 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036577.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44741393 44750751 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036578.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44741425 44750751 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036579.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44748498 44749744 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036580.1 MGP_NODShiLtJ_G0020335.1 mouse_genomes_project 13 44750881 44754011 + Phactr1 protein_coding processed_transcript MGP_NODShiLtJ_T0036257.1 MGP_NODShiLtJ_G0020197.1 mouse_genomes_project 13 22933802 22973993 - MGP_NODShiLtJ_P0036257 Hist1h2be protein_coding protein_coding MGP_NODShiLtJ_T0036258.1 MGP_NODShiLtJ_G0020197.1 mouse_genomes_project 13 22933803 22974023 - MGP_NODShiLtJ_P0036258 Hist1h2be protein_coding protein_coding MGP_NODShiLtJ_T0036259.1 MGP_NODShiLtJ_G0020197.1 mouse_genomes_project 13 22971892 22973977 - Hist1h2be protein_coding processed_transcript MGP_NODShiLtJ_T0036431.1 MGP_NODShiLtJ_G0020278.1 mouse_genomes_project 13 33773607 33851993 + MGP_NODShiLtJ_P0036431 Serpinb9g protein_coding protein_coding MGP_NODShiLtJ_T0036632.1 MGP_NODShiLtJ_G0020357.1 mouse_genomes_project 13 48984731 48987014 - MGP_NODShiLtJ_P0036632 Nhlrc1 protein_coding protein_coding MGP_NODShiLtJ_T0036495.1 MGP_NODShiLtJ_G0020302.1 mouse_genomes_project 13 36998752 37167971 - MGP_NODShiLtJ_P0036495 Lyrm4 protein_coding protein_coding MGP_NODShiLtJ_T0003405.1 MGP_NODShiLtJ_G0003120.1 mouse_genomes_project 13 58590116 58594938 - antisense antisense MGP_NODShiLtJ_T0003406.1 MGP_NODShiLtJ_G0003120.1 mouse_genomes_project 13 58590920 58594923 - antisense antisense MGP_NODShiLtJ_T0003407.1 MGP_NODShiLtJ_G0003120.1 mouse_genomes_project 13 58590927 58594949 - antisense antisense MGP_NODShiLtJ_T0037226.1 MGP_NODShiLtJ_G0020556.1 mouse_genomes_project 13 71477646 71501721 - MGP_NODShiLtJ_P0037226 Zfp729b protein_coding protein_coding MGP_NODShiLtJ_T0037227.1 MGP_NODShiLtJ_G0020556.1 mouse_genomes_project 13 71498429 71549002 - Zfp729b protein_coding processed_transcript MGP_NODShiLtJ_T0037523.1 MGP_NODShiLtJ_G0020652.1 mouse_genomes_project 13 100919091 100936195 + MGP_NODShiLtJ_P0037523 Ankrd34b protein_coding protein_coding MGP_NODShiLtJ_T0037524.1 MGP_NODShiLtJ_G0020652.1 mouse_genomes_project 13 100919536 100932896 + MGP_NODShiLtJ_P0037524 Ankrd34b protein_coding protein_coding MGP_NODShiLtJ_T0037525.1 MGP_NODShiLtJ_G0020652.1 mouse_genomes_project 13 100919853 100935467 + MGP_NODShiLtJ_P0037525 Ankrd34b protein_coding protein_coding MGP_NODShiLtJ_T0006499.1 MGP_NODShiLtJ_G0005384.1 mouse_genomes_project 13 46116655 46174203 - Gm27007 lincRNA lincRNA MGP_NODShiLtJ_T0037674.1 MGP_NODShiLtJ_G0020708.1 mouse_genomes_project 13 108048540 108143698 - MGP_NODShiLtJ_P0037674 Tnpo1 protein_coding protein_coding MGP_NODShiLtJ_T0037675.1 MGP_NODShiLtJ_G0020708.1 mouse_genomes_project 13 108053993 108116560 - MGP_NODShiLtJ_P0037675 Tnpo1 protein_coding protein_coding MGP_NODShiLtJ_T0037676.1 MGP_NODShiLtJ_G0020708.1 mouse_genomes_project 13 108060066 108102624 - MGP_NODShiLtJ_P0037676 Tnpo1 protein_coding protein_coding MGP_NODShiLtJ_T0037677.1 MGP_NODShiLtJ_G0020708.1 mouse_genomes_project 13 108086342 108102640 - MGP_NODShiLtJ_P0037677 Tnpo1 protein_coding protein_coding MGP_NODShiLtJ_T0009827.1 MGP_NODShiLtJ_G0007960.1 mouse_genomes_project 13 20720313 20720449 + Gm44357 miRNA miRNA MGP_NODShiLtJ_T0003396.1 MGP_NODShiLtJ_G0003111.1 mouse_genomes_project 13 43309254 43310267 + 1700061E18Rik antisense antisense MGP_NODShiLtJ_T0000876.1 MGP_NODShiLtJ_G0000805.1 mouse_genomes_project 13 110301517 110304933 + TEC TEC MGP_NODShiLtJ_T0037595.1 MGP_NODShiLtJ_G0020677.1 mouse_genomes_project 13 104245189 104260498 - MGP_NODShiLtJ_P0037595 Crhbp protein_coding protein_coding MGP_NODShiLtJ_T0036514.1 MGP_NODShiLtJ_G0020309.1 mouse_genomes_project 13 39205417 39238636 - MGP_NODShiLtJ_P0036514 Cage1 protein_coding protein_coding MGP_NODShiLtJ_T0036515.1 MGP_NODShiLtJ_G0020309.1 mouse_genomes_project 13 39224924 39238630 - MGP_NODShiLtJ_P0036515 Cage1 protein_coding protein_coding MGP_NODShiLtJ_T0012802.1 MGP_NODShiLtJ_G0010910.1 mouse_genomes_project 13 46156440 46157420 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012817.1 MGP_NODShiLtJ_G0010925.1 mouse_genomes_project 13 73944608 73945019 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0036542.1 MGP_NODShiLtJ_G0020322.1 mouse_genomes_project 13 42469968 42477402 + MGP_NODShiLtJ_P0036542 Tmem14c protein_coding protein_coding MGP_NODShiLtJ_T0098801.1 MGP_NODShiLtJ_G0037195.1 mouse_genomes_project 13 30370814 30370998 - Gm23206 snRNA snRNA MGP_NODShiLtJ_T0036459.1 MGP_NODShiLtJ_G0020287.1 mouse_genomes_project 13 34839784 34871113 + MGP_NODShiLtJ_P0036459 Ripk1 protein_coding protein_coding MGP_NODShiLtJ_T0036460.1 MGP_NODShiLtJ_G0020287.1 mouse_genomes_project 13 34839821 34852108 + Ripk1 protein_coding retained_intron MGP_NODShiLtJ_T0036461.1 MGP_NODShiLtJ_G0020287.1 mouse_genomes_project 13 34840295 34872606 + MGP_NODShiLtJ_P0036461 Ripk1 protein_coding protein_coding MGP_NODShiLtJ_T0036462.1 MGP_NODShiLtJ_G0020287.1 mouse_genomes_project 13 34847119 34870218 + MGP_NODShiLtJ_P0036462 Ripk1 protein_coding protein_coding MGP_NODShiLtJ_T0011243.1 MGP_NODShiLtJ_G0009376.1 mouse_genomes_project 13 53385961 53386087 + Gm22199 misc_RNA misc_RNA MGP_NODShiLtJ_T0036936.1 MGP_NODShiLtJ_G0020444.1 mouse_genomes_project 13 58386660 58391189 + MGP_NODShiLtJ_P0036936 Tmed9 protein_coding protein_coding MGP_NODShiLtJ_T0037462.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97698810 97810622 - MGP_NODShiLtJ_P0037462 Vcan protein_coding protein_coding MGP_NODShiLtJ_T0037463.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97699837 97810435 - MGP_NODShiLtJ_P0037463 Vcan protein_coding protein_coding MGP_NODShiLtJ_T0037464.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97700142 97810447 - MGP_NODShiLtJ_P0037464 Vcan protein_coding protein_coding MGP_NODShiLtJ_T0037465.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97700514 97723888 - MGP_NODShiLtJ_P0037465 Vcan protein_coding protein_coding MGP_NODShiLtJ_T0037466.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97700553 97810357 - MGP_NODShiLtJ_P0037466 Vcan protein_coding protein_coding MGP_NODShiLtJ_T0037467.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97701152 97724991 - MGP_NODShiLtJ_P0037467 Vcan protein_coding protein_coding MGP_NODShiLtJ_T0037468.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97772036 97789260 - Vcan protein_coding retained_intron MGP_NODShiLtJ_T0037469.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97772345 97810431 - MGP_NODShiLtJ_P0037469 Vcan protein_coding protein_coding MGP_NODShiLtJ_T0037470.1 MGP_NODShiLtJ_G0020637.1 mouse_genomes_project 13 97792721 97808510 - MGP_NODShiLtJ_P0037470 Vcan protein_coding protein_coding MGP_NODShiLtJ_T0037567.1 MGP_NODShiLtJ_G0020669.1 mouse_genomes_project 13 103068455 103071980 - MGP_NODShiLtJ_P0037567 Gm9776 protein_coding protein_coding MGP_NODShiLtJ_T0036100.1 MGP_NODShiLtJ_G0020102.1 mouse_genomes_project 13 16519448 16578301 - MGP_NODShiLtJ_P0036100 Rala protein_coding protein_coding MGP_NODShiLtJ_T0037736.1 MGP_NODShiLtJ_G0020730.1 mouse_genomes_project 13 110172614 110190262 - MGP_NODShiLtJ_P0037736 Cenph protein_coding protein_coding MGP_NODShiLtJ_T0037737.1 MGP_NODShiLtJ_G0020730.1 mouse_genomes_project 13 110186555 110190146 - Cenph protein_coding retained_intron MGP_NODShiLtJ_T0037096.1 MGP_NODShiLtJ_G0020502.1 mouse_genomes_project 13 64802385 64807611 - MGP_NODShiLtJ_P0037096 Ctsm protein_coding protein_coding MGP_NODShiLtJ_T0101632.1 MGP_NODShiLtJ_G0039801.1 mouse_genomes_project 13 33358002 33361214 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0009873.1 MGP_NODShiLtJ_G0008006.1 mouse_genomes_project 13 120507207 120507287 + Mir1904 miRNA miRNA MGP_NODShiLtJ_T0037132.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67368614 67415819 + MGP_NODShiLtJ_P0037132 Ercc6l2 protein_coding protein_coding MGP_NODShiLtJ_T0037133.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67368676 67436793 + MGP_NODShiLtJ_P0037133 Ercc6l2 protein_coding protein_coding MGP_NODShiLtJ_T0037134.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67368708 67394665 + Ercc6l2 protein_coding processed_transcript MGP_NODShiLtJ_T0037135.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67368708 67433815 + MGP_NODShiLtJ_P0037135 Ercc6l2 protein_coding protein_coding MGP_NODShiLtJ_T0037136.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67368708 67415784 + MGP_NODShiLtJ_P0037136 Ercc6l2 protein_coding protein_coding MGP_NODShiLtJ_T0037137.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67377291 67433460 + MGP_NODShiLtJ_P0037137 Ercc6l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037138.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67377293 67421780 + MGP_NODShiLtJ_P0037138 Ercc6l2 protein_coding protein_coding MGP_NODShiLtJ_T0037139.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67377293 67433836 + MGP_NODShiLtJ_P0037139 Ercc6l2 protein_coding protein_coding MGP_NODShiLtJ_T0037140.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67377616 67402226 + MGP_NODShiLtJ_P0037140 Ercc6l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0037141.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67434690 67436700 + Ercc6l2 protein_coding processed_transcript MGP_NODShiLtJ_T0037142.1 MGP_NODShiLtJ_G0020511.1 mouse_genomes_project 13 67436657 67467783 + MGP_NODShiLtJ_P0037142 Ercc6l2 protein_coding protein_coding MGP_NODShiLtJ_T0037164.1 MGP_NODShiLtJ_G0020525.1 mouse_genomes_project 13 68688186 68762441 - MGP_NODShiLtJ_P0037164 Mfsd14b protein_coding protein_coding MGP_NODShiLtJ_T0037165.1 MGP_NODShiLtJ_G0020525.1 mouse_genomes_project 13 68688573 68762448 - MGP_NODShiLtJ_P0037165 Mfsd14b protein_coding protein_coding MGP_NODShiLtJ_T0037166.1 MGP_NODShiLtJ_G0020525.1 mouse_genomes_project 13 68694910 68699678 - Mfsd14b protein_coding retained_intron MGP_NODShiLtJ_T0003380.1 MGP_NODShiLtJ_G0003099.1 mouse_genomes_project 13 20992381 20998460 - Gm11280 antisense antisense MGP_NODShiLtJ_T0037228.1 MGP_NODShiLtJ_G0020557.1 mouse_genomes_project 13 71522886 71549040 - MGP_NODShiLtJ_P0037228 Zfp729a protein_coding protein_coding MGP_NODShiLtJ_T0003397.1 MGP_NODShiLtJ_G0003112.1 mouse_genomes_project 13 43357381 43374237 + antisense antisense MGP_NODShiLtJ_T0003403.1 MGP_NODShiLtJ_G0003118.1 mouse_genomes_project 13 57500548 57501654 - antisense antisense MGP_NODShiLtJ_T0100048.1 MGP_NODShiLtJ_G0038442.1 mouse_genomes_project 13 17670643 17670777 + Gm26172 snoRNA snoRNA MGP_NODShiLtJ_T0037215.1 MGP_NODShiLtJ_G0020552.1 mouse_genomes_project 13 71359362 71369388 - MGP_NODShiLtJ_P0037215 Zfp58 protein_coding protein_coding MGP_NODShiLtJ_T0037216.1 MGP_NODShiLtJ_G0020552.1 mouse_genomes_project 13 71359363 71369440 - MGP_NODShiLtJ_P0037216 Zfp58 protein_coding protein_coding MGP_NODShiLtJ_T0037218.1 MGP_NODShiLtJ_G0020552.1 mouse_genomes_project 13 71360847 71369372 - MGP_NODShiLtJ_P0037218 Zfp58 protein_coding protein_coding MGP_NODShiLtJ_T0037219.1 MGP_NODShiLtJ_G0020552.1 mouse_genomes_project 13 71361062 71369329 - MGP_NODShiLtJ_P0037219 Zfp58 protein_coding protein_coding MGP_NODShiLtJ_T0037217.1 MGP_NODShiLtJ_G0020553.1 mouse_genomes_project 13 71360352 71395229 - MGP_NODShiLtJ_P0037217 Gm26965 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036402.1 MGP_NODShiLtJ_G0020260.1 mouse_genomes_project 13 31231694 31232881 - MGP_NODShiLtJ_P0036402 Hus1b protein_coding protein_coding MGP_NODShiLtJ_T0101604.1 MGP_NODShiLtJ_G0039773.1 mouse_genomes_project 13 21557975 21558746 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003404.1 MGP_NODShiLtJ_G0003119.1 mouse_genomes_project 13 58395706 58398309 - Gm15911 antisense antisense MGP_NODShiLtJ_T0036287.1 MGP_NODShiLtJ_G0020214.1 mouse_genomes_project 13 23279974 23297148 - MGP_NODShiLtJ_P0036287 Slc17a4 protein_coding protein_coding MGP_NODShiLtJ_T0036288.1 MGP_NODShiLtJ_G0020214.1 mouse_genomes_project 13 23280125 23297150 - MGP_NODShiLtJ_P0036288 Slc17a4 protein_coding protein_coding MGP_NODShiLtJ_T0036171.1 MGP_NODShiLtJ_G0020131.1 mouse_genomes_project 13 20529245 20530299 - MGP_NODShiLtJ_P0036171 protein_coding protein_coding MGP_NODShiLtJ_T0036173.1 MGP_NODShiLtJ_G0020131.1 mouse_genomes_project 13 20529509 20535062 - MGP_NODShiLtJ_P0036173 protein_coding protein_coding MGP_NODShiLtJ_T0037786.1 MGP_NODShiLtJ_G0020739.1 mouse_genomes_project 13 113803503 113827799 + MGP_NODShiLtJ_P0037786 Sgtb protein_coding protein_coding MGP_NODShiLtJ_T0037787.1 MGP_NODShiLtJ_G0020739.1 mouse_genomes_project 13 113803518 113835984 + MGP_NODShiLtJ_P0037787 Sgtb protein_coding protein_coding MGP_NODShiLtJ_T0036652.1 MGP_NODShiLtJ_G0020362.1 mouse_genomes_project 13 50369310 50371920 + MGP_NODShiLtJ_P0036652 Id4 protein_coding protein_coding MGP_NODShiLtJ_T0037977.1 MGP_NODShiLtJ_G0020811.1 mouse_genomes_project 13 131878181 131927155 - MGP_NODShiLtJ_P0037977 Nim1k protein_coding protein_coding MGP_NODShiLtJ_T0037978.1 MGP_NODShiLtJ_G0020811.1 mouse_genomes_project 13 131892012 131907087 - MGP_NODShiLtJ_P0037978 Nim1k protein_coding protein_coding MGP_NODShiLtJ_T0037598.1 MGP_NODShiLtJ_G0020680.1 mouse_genomes_project 13 104434876 104451547 - MGP_NODShiLtJ_P0037598 F2r protein_coding protein_coding MGP_NODShiLtJ_T0037087.1 MGP_NODShiLtJ_G0020494.1 mouse_genomes_project 13 64137212 64139706 - MGP_NODShiLtJ_P0037087 Ctla2a protein_coding protein_coding MGP_NODShiLtJ_T0037875.1 MGP_NODShiLtJ_G0020766.1 mouse_genomes_project 13 121979594 121982331 + MGP_NODShiLtJ_P0037875 Actbl2 protein_coding protein_coding MGP_NODShiLtJ_T0012808.1 MGP_NODShiLtJ_G0010916.1 mouse_genomes_project 13 67515000 67515593 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006494.1 MGP_NODShiLtJ_G0005380.1 mouse_genomes_project 13 40240413 40246094 + 5033403F01Rik lincRNA lincRNA MGP_NODShiLtJ_T0036053.1 MGP_NODShiLtJ_G0020083.1 mouse_genomes_project 13 10751432 10751693 - MGP_NODShiLtJ_P0036053 Gm11360 protein_coding protein_coding MGP_NODShiLtJ_T0036144.1 MGP_NODShiLtJ_G0020120.1 mouse_genomes_project 13 20258410 20264712 - MGP_NODShiLtJ_P0036144 Gpx5 protein_coding protein_coding MGP_NODShiLtJ_T0036145.1 MGP_NODShiLtJ_G0020120.1 mouse_genomes_project 13 20258410 20264667 - MGP_NODShiLtJ_P0036145 Gpx5 protein_coding protein_coding MGP_NODShiLtJ_T0036279.1 MGP_NODShiLtJ_G0020212.1 mouse_genomes_project 13 23216228 23237460 + MGP_NODShiLtJ_P0036279 Slc17a3 protein_coding protein_coding MGP_NODShiLtJ_T0036280.1 MGP_NODShiLtJ_G0020212.1 mouse_genomes_project 13 23216228 23237460 + MGP_NODShiLtJ_P0036280 Slc17a3 protein_coding protein_coding MGP_NODShiLtJ_T0036281.1 MGP_NODShiLtJ_G0020212.1 mouse_genomes_project 13 23216243 23235089 + MGP_NODShiLtJ_P0036281 Slc17a3 protein_coding protein_coding MGP_NODShiLtJ_T0036282.1 MGP_NODShiLtJ_G0020212.1 mouse_genomes_project 13 23216272 23235089 + MGP_NODShiLtJ_P0036282 Slc17a3 protein_coding protein_coding MGP_NODShiLtJ_T0036283.1 MGP_NODShiLtJ_G0020212.1 mouse_genomes_project 13 23219251 23225555 + MGP_NODShiLtJ_P0036283 Slc17a3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0036406.1 MGP_NODShiLtJ_G0020264.1 mouse_genomes_project 13 31948782 31954364 + MGP_NODShiLtJ_P0036406 Foxf2 protein_coding protein_coding MGP_NODShiLtJ_T0036376.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29340924 30045801 - MGP_NODShiLtJ_P0036376 Cdkal1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036377.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29491231 30045828 - MGP_NODShiLtJ_P0036377 Cdkal1 protein_coding protein_coding MGP_NODShiLtJ_T0036378.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29569551 29639553 - MGP_NODShiLtJ_P0036378 Cdkal1 protein_coding protein_coding MGP_NODShiLtJ_T0036379.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29608451 29686147 - MGP_NODShiLtJ_P0036379 Cdkal1 protein_coding protein_coding MGP_NODShiLtJ_T0036380.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29638813 30045797 - Cdkal1 protein_coding retained_intron MGP_NODShiLtJ_T0036381.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29682899 30045797 - Cdkal1 protein_coding retained_intron MGP_NODShiLtJ_T0036382.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29691515 30045793 - MGP_NODShiLtJ_P0036382 Cdkal1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0036383.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29887492 30045811 - Cdkal1 protein_coding retained_intron MGP_NODShiLtJ_T0036384.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29959607 30045585 - MGP_NODShiLtJ_P0036384 Cdkal1 protein_coding protein_coding MGP_NODShiLtJ_T0036385.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 29985836 30045817 - MGP_NODShiLtJ_P0036385 Cdkal1 protein_coding protein_coding MGP_NODShiLtJ_T0036386.1 MGP_NODShiLtJ_G0020252.1 mouse_genomes_project 13 30027181 30045819 - MGP_NODShiLtJ_P0036386 Cdkal1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0017218.1 MGP_NODShiLtJ_G0015117.1 mouse_genomes_project 13 21078634 21080194 + Gm11291 processed_transcript processed_transcript MGP_NODShiLtJ_T0003401.1 MGP_NODShiLtJ_G0003116.1 mouse_genomes_project 13 52660867 52830105 - antisense antisense MGP_NODShiLtJ_T0012960.1 MGP_NODShiLtJ_G0011068.1 mouse_genomes_project 15 68669085 68669535 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101661.1 MGP_NODShiLtJ_G0039830.1 mouse_genomes_project 15 85798470 85801632 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098894.1 MGP_NODShiLtJ_G0037288.1 mouse_genomes_project 15 55867647 55867732 - Gm23185 snRNA snRNA MGP_NODShiLtJ_T0042507.1 MGP_NODShiLtJ_G0022251.1 mouse_genomes_project 15 115975209 116080544 - MGP_NODShiLtJ_P0042507 Atf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041608.1 MGP_NODShiLtJ_G0021955.1 mouse_genomes_project 15 93216682 93228920 - MGP_NODShiLtJ_P0041608 Polr3h protein_coding protein_coding MGP_NODShiLtJ_T0006725.1 MGP_NODShiLtJ_G0005541.1 mouse_genomes_project 15 93097565 93099393 - Gm17597 lincRNA lincRNA MGP_NODShiLtJ_T0003565.1 MGP_NODShiLtJ_G0003227.1 mouse_genomes_project 15 94671622 94675468 - Gm17206 antisense antisense MGP_NODShiLtJ_T0041314.1 MGP_NODShiLtJ_G0021879.1 mouse_genomes_project 15 89620501 89645464 + MGP_NODShiLtJ_P0041314 Cyth4 protein_coding protein_coding MGP_NODShiLtJ_T0017339.1 MGP_NODShiLtJ_G0015177.1 mouse_genomes_project 15 104247128 104274816 + processed_transcript processed_transcript MGP_NODShiLtJ_T0017340.1 MGP_NODShiLtJ_G0015177.1 mouse_genomes_project 15 104255972 104288528 + processed_transcript processed_transcript MGP_NODShiLtJ_T0000921.1 MGP_NODShiLtJ_G0000850.1 mouse_genomes_project 15 77947644 77950566 - TEC TEC MGP_NODShiLtJ_T0012975.1 MGP_NODShiLtJ_G0011083.1 mouse_genomes_project 15 89572123 89572561 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040646.1 MGP_NODShiLtJ_G0021680.1 mouse_genomes_project 15 61566304 62038408 - Samd12 protein_coding processed_transcript MGP_NODShiLtJ_T0040647.1 MGP_NODShiLtJ_G0021680.1 mouse_genomes_project 15 61566484 62038401 - MGP_NODShiLtJ_P0040647 Samd12 protein_coding protein_coding MGP_NODShiLtJ_T0040648.1 MGP_NODShiLtJ_G0021680.1 mouse_genomes_project 15 61566877 62038252 - MGP_NODShiLtJ_P0040648 Samd12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040649.1 MGP_NODShiLtJ_G0021680.1 mouse_genomes_project 15 61951942 62038408 - Samd12 protein_coding processed_transcript MGP_NODShiLtJ_T0009987.1 MGP_NODShiLtJ_G0008120.1 mouse_genomes_project 15 97512688 97512783 + Mirlet7c-2 miRNA miRNA MGP_NODShiLtJ_T0000911.1 MGP_NODShiLtJ_G0000840.1 mouse_genomes_project 15 4425606 4432077 + TEC TEC MGP_NODShiLtJ_T0006678.1 MGP_NODShiLtJ_G0005510.1 mouse_genomes_project 15 985154 1005799 + Gm2093 lincRNA lincRNA MGP_NODShiLtJ_T0040516.1 MGP_NODShiLtJ_G0021630.1 mouse_genomes_project 15 40215117 40259705 - MGP_NODShiLtJ_P0040516 Rnf19a protein_coding protein_coding MGP_NODShiLtJ_T0100181.1 MGP_NODShiLtJ_G0038575.1 mouse_genomes_project 15 86452212 86452343 + Gm23747 snoRNA snoRNA MGP_NODShiLtJ_T0042566.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116906687 116928307 - MGP_NODShiLtJ_P0042566 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0042567.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116906738 116926443 - MGP_NODShiLtJ_P0042567 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0042568.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116906738 116926337 - MGP_NODShiLtJ_P0042568 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0042569.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116906741 116927399 - MGP_NODShiLtJ_P0042569 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0042570.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116906763 116928186 - MGP_NODShiLtJ_P0042570 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0042571.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116906775 116928181 - MGP_NODShiLtJ_P0042571 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0042572.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116906794 116928216 - MGP_NODShiLtJ_P0042572 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0042573.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116914611 116928246 - MGP_NODShiLtJ_P0042573 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0042574.1 MGP_NODShiLtJ_G0022272.1 mouse_genomes_project 15 116917012 116928081 - MGP_NODShiLtJ_P0042574 Gtsf1 protein_coding protein_coding MGP_NODShiLtJ_T0100187.1 MGP_NODShiLtJ_G0038581.1 mouse_genomes_project 15 111017379 111017508 + Gm25668 snoRNA snoRNA MGP_NODShiLtJ_T0042384.1 MGP_NODShiLtJ_G0022201.1 mouse_genomes_project 15 114587099 114593733 + MGP_NODShiLtJ_P0042384 Atg101 protein_coding protein_coding MGP_NODShiLtJ_T0097766.1 MGP_NODShiLtJ_G0036178.1 mouse_genomes_project 15 50166492 50168168 + pseudogene pseudogene MGP_NODShiLtJ_T0040572.1 MGP_NODShiLtJ_G0021645.1 mouse_genomes_project 15 42866410 42892392 + MGP_NODShiLtJ_P0040572 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0040902.1 MGP_NODShiLtJ_G0021763.1 mouse_genomes_project 15 85039410 85072053 - MGP_NODShiLtJ_P0040902 Mroh4 protein_coding protein_coding MGP_NODShiLtJ_T0040903.1 MGP_NODShiLtJ_G0021763.1 mouse_genomes_project 15 85039410 85070553 - MGP_NODShiLtJ_P0040903 Mroh4 protein_coding protein_coding MGP_NODShiLtJ_T0040904.1 MGP_NODShiLtJ_G0021763.1 mouse_genomes_project 15 85039784 85045394 - MGP_NODShiLtJ_P0040904 Mroh4 protein_coding protein_coding MGP_NODShiLtJ_T0040905.1 MGP_NODShiLtJ_G0021763.1 mouse_genomes_project 15 85039796 85041610 - Mroh4 protein_coding retained_intron MGP_NODShiLtJ_T0040906.1 MGP_NODShiLtJ_G0021763.1 mouse_genomes_project 15 85049515 85062226 - MGP_NODShiLtJ_P0040906 Mroh4 protein_coding protein_coding MGP_NODShiLtJ_T0040907.1 MGP_NODShiLtJ_G0021763.1 mouse_genomes_project 15 85065461 85071998 - Mroh4 protein_coding processed_transcript MGP_NODShiLtJ_T0040288.1 MGP_NODShiLtJ_G0021551.1 mouse_genomes_project 15 6829871 6892798 + MGP_NODShiLtJ_P0040288 Lmbrd2 protein_coding protein_coding MGP_NODShiLtJ_T0041859.1 MGP_NODShiLtJ_G0022044.1 mouse_genomes_project 15 101122784 101131802 + MGP_NODShiLtJ_P0041859 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041860.1 MGP_NODShiLtJ_G0022044.1 mouse_genomes_project 15 101122784 101133949 + MGP_NODShiLtJ_P0041860 protein_coding protein_coding MGP_NODShiLtJ_T0006735.1 MGP_NODShiLtJ_G0005547.1 mouse_genomes_project 15 101261754 101266285 - Gm26798 lincRNA lincRNA MGP_NODShiLtJ_T0040501.1 MGP_NODShiLtJ_G0021624.1 mouse_genomes_project 15 39039588 39046793 + MGP_NODShiLtJ_P0040501 Osr2 protein_coding protein_coding MGP_NODShiLtJ_T0041987.1 MGP_NODShiLtJ_G0022077.1 mouse_genomes_project 15 103996866 104164435 + MGP_NODShiLtJ_P0041987 Lrrk2 protein_coding protein_coding MGP_NODShiLtJ_T0041988.1 MGP_NODShiLtJ_G0022077.1 mouse_genomes_project 15 103996972 104162252 + MGP_NODShiLtJ_P0041988 Lrrk2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041989.1 MGP_NODShiLtJ_G0022077.1 mouse_genomes_project 15 104072782 104129604 + Lrrk2 protein_coding processed_transcript MGP_NODShiLtJ_T0041990.1 MGP_NODShiLtJ_G0022077.1 mouse_genomes_project 15 104109526 104115672 + Lrrk2 protein_coding processed_transcript MGP_NODShiLtJ_T0041991.1 MGP_NODShiLtJ_G0022077.1 mouse_genomes_project 15 104117558 104164341 + Lrrk2 protein_coding processed_transcript MGP_NODShiLtJ_T0041992.1 MGP_NODShiLtJ_G0022077.1 mouse_genomes_project 15 104154962 104164341 + Lrrk2 protein_coding retained_intron MGP_NODShiLtJ_T0041837.1 MGP_NODShiLtJ_G0022038.1 mouse_genomes_project 15 100896170 100899703 + MGP_NODShiLtJ_P0041837 Pim3 protein_coding protein_coding MGP_NODShiLtJ_T0041588.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93099200 93124382 + MGP_NODShiLtJ_P0041588 Tef protein_coding protein_coding MGP_NODShiLtJ_T0041589.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93099486 93102829 + Tef protein_coding processed_transcript MGP_NODShiLtJ_T0041590.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93099509 93102134 + Tef protein_coding processed_transcript MGP_NODShiLtJ_T0041591.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93099516 93114689 + Tef protein_coding retained_intron MGP_NODShiLtJ_T0041592.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93099605 93102691 + Tef protein_coding processed_transcript MGP_NODShiLtJ_T0041593.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93107825 93118781 + MGP_NODShiLtJ_P0041593 Tef protein_coding protein_coding MGP_NODShiLtJ_T0041594.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93108193 93124219 + MGP_NODShiLtJ_P0041594 Tef protein_coding protein_coding MGP_NODShiLtJ_T0041595.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93109835 93112886 + MGP_NODShiLtJ_P0041595 Tef protein_coding protein_coding MGP_NODShiLtJ_T0041596.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93118117 93118908 + Tef protein_coding processed_transcript MGP_NODShiLtJ_T0041597.1 MGP_NODShiLtJ_G0021950.1 mouse_genomes_project 15 93118467 93121300 + Tef protein_coding retained_intron MGP_NODShiLtJ_T0042168.1 MGP_NODShiLtJ_G0022133.1 mouse_genomes_project 15 111670440 111687976 - MGP_NODShiLtJ_P0042168 Ddx23 protein_coding protein_coding MGP_NODShiLtJ_T0042169.1 MGP_NODShiLtJ_G0022133.1 mouse_genomes_project 15 111673298 111687971 - Ddx23 protein_coding retained_intron MGP_NODShiLtJ_T0042170.1 MGP_NODShiLtJ_G0022133.1 mouse_genomes_project 15 111673310 111687968 - Ddx23 protein_coding retained_intron MGP_NODShiLtJ_T0042171.1 MGP_NODShiLtJ_G0022133.1 mouse_genomes_project 15 111677283 111687971 - Ddx23 protein_coding retained_intron MGP_NODShiLtJ_T0042172.1 MGP_NODShiLtJ_G0022133.1 mouse_genomes_project 15 111681743 111687945 - MGP_NODShiLtJ_P0042172 Ddx23 protein_coding protein_coding MGP_NODShiLtJ_T0042173.1 MGP_NODShiLtJ_G0022133.1 mouse_genomes_project 15 111682957 111687976 - Ddx23 protein_coding retained_intron MGP_NODShiLtJ_T0009943.1 MGP_NODShiLtJ_G0008076.1 mouse_genomes_project 15 32765070 32765144 - Mir3964 miRNA miRNA MGP_NODShiLtJ_T0100188.1 MGP_NODShiLtJ_G0038582.1 mouse_genomes_project 15 111517571 111517709 - Snora34 snoRNA snoRNA MGP_NODShiLtJ_T0040325.1 MGP_NODShiLtJ_G0021561.1 mouse_genomes_project 15 8364851 8376618 - MGP_NODShiLtJ_P0040325 Brix1 protein_coding protein_coding MGP_NODShiLtJ_T0040326.1 MGP_NODShiLtJ_G0021561.1 mouse_genomes_project 15 8368871 8376058 - MGP_NODShiLtJ_P0040326 Brix1 protein_coding protein_coding MGP_NODShiLtJ_T0040327.1 MGP_NODShiLtJ_G0021561.1 mouse_genomes_project 15 8369242 8376580 - MGP_NODShiLtJ_P0040327 Brix1 protein_coding protein_coding MGP_NODShiLtJ_T0040328.1 MGP_NODShiLtJ_G0021561.1 mouse_genomes_project 15 8369687 8376558 - MGP_NODShiLtJ_P0040328 Brix1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009939.1 MGP_NODShiLtJ_G0008072.1 mouse_genomes_project 15 13461204 13461436 - Gm24080 miRNA miRNA MGP_NODShiLtJ_T0040227.1 MGP_NODShiLtJ_G0021536.1 mouse_genomes_project 15 3835965 3895933 + MGP_NODShiLtJ_P0040227 C9 protein_coding protein_coding MGP_NODShiLtJ_T0040228.1 MGP_NODShiLtJ_G0021536.1 mouse_genomes_project 15 3836010 3859354 + MGP_NODShiLtJ_P0040228 C9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040229.1 MGP_NODShiLtJ_G0021536.1 mouse_genomes_project 15 3886660 3888603 + C9 protein_coding retained_intron MGP_NODShiLtJ_T0040230.1 MGP_NODShiLtJ_G0021536.1 mouse_genomes_project 15 3887098 3895926 + MGP_NODShiLtJ_P0040230 C9 protein_coding protein_coding MGP_NODShiLtJ_T0042446.1 MGP_NODShiLtJ_G0022237.1 mouse_genomes_project 15 115697628 115699917 + MGP_NODShiLtJ_P0042446 Mfsd5 protein_coding protein_coding MGP_NODShiLtJ_T0041722.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95423774 95437404 + MGP_NODShiLtJ_P0041722 Mpped1 protein_coding protein_coding MGP_NODShiLtJ_T0041723.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95434150 95510178 + MGP_NODShiLtJ_P0041723 Mpped1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041724.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95437211 95507998 + MGP_NODShiLtJ_P0041724 Mpped1 protein_coding protein_coding MGP_NODShiLtJ_T0041725.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95437286 95508094 + MGP_NODShiLtJ_P0041725 Mpped1 protein_coding protein_coding MGP_NODShiLtJ_T0041726.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95437307 95510172 + MGP_NODShiLtJ_P0041726 Mpped1 protein_coding protein_coding MGP_NODShiLtJ_T0041727.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95444244 95503761 + MGP_NODShiLtJ_P0041727 Mpped1 protein_coding protein_coding MGP_NODShiLtJ_T0041728.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95447704 95507979 + MGP_NODShiLtJ_P0041728 Mpped1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041729.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95486597 95507999 + MGP_NODShiLtJ_P0041729 Mpped1 protein_coding protein_coding MGP_NODShiLtJ_T0041730.1 MGP_NODShiLtJ_G0021998.1 mouse_genomes_project 15 95486630 95506207 + MGP_NODShiLtJ_P0041730 Mpped1 protein_coding protein_coding MGP_NODShiLtJ_T0040593.1 MGP_NODShiLtJ_G0021656.1 mouse_genomes_project 15 45035330 45547598 + MGP_NODShiLtJ_P0040593 Zfpm2 protein_coding protein_coding MGP_NODShiLtJ_T0000927.1 MGP_NODShiLtJ_G0000856.1 mouse_genomes_project 15 116881567 116881904 + TEC TEC MGP_NODShiLtJ_T0040213.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3672170 3826168 + Dab2 protein_coding processed_transcript MGP_NODShiLtJ_T0040214.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3672170 3831360 + MGP_NODShiLtJ_P0040214 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040215.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3672195 3804937 + MGP_NODShiLtJ_P0040215 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040216.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3672214 3816674 + MGP_NODShiLtJ_P0040216 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040217.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3672250 3720224 + Dab2 protein_coding processed_transcript MGP_NODShiLtJ_T0040218.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3772968 3831353 + MGP_NODShiLtJ_P0040218 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040219.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3773118 3831353 + MGP_NODShiLtJ_P0040219 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040220.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3773146 3830276 + MGP_NODShiLtJ_P0040220 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040221.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3773147 3830296 + MGP_NODShiLtJ_P0040221 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040222.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3773149 3816674 + MGP_NODShiLtJ_P0040222 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040223.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3775426 3807227 + MGP_NODShiLtJ_P0040223 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040224.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3776479 3808746 + MGP_NODShiLtJ_P0040224 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040225.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3811148 3829555 + MGP_NODShiLtJ_P0040225 Dab2 protein_coding protein_coding MGP_NODShiLtJ_T0040226.1 MGP_NODShiLtJ_G0021535.1 mouse_genomes_project 15 3812070 3813933 + Dab2 protein_coding retained_intron MGP_NODShiLtJ_T0040245.1 MGP_NODShiLtJ_G0021540.1 mouse_genomes_project 15 4569976 4632656 + MGP_NODShiLtJ_P0040245 Lifr protein_coding protein_coding MGP_NODShiLtJ_T0040246.1 MGP_NODShiLtJ_G0021540.1 mouse_genomes_project 15 4569989 4626248 + MGP_NODShiLtJ_P0040246 Lifr protein_coding protein_coding MGP_NODShiLtJ_T0040247.1 MGP_NODShiLtJ_G0021540.1 mouse_genomes_project 15 4595602 4639132 + MGP_NODShiLtJ_P0040247 Lifr protein_coding protein_coding MGP_NODShiLtJ_T0041673.1 MGP_NODShiLtJ_G0021983.1 mouse_genomes_project 15 94342549 94463211 - MGP_NODShiLtJ_P0041673 Tcf20 protein_coding protein_coding MGP_NODShiLtJ_T0041674.1 MGP_NODShiLtJ_G0021983.1 mouse_genomes_project 15 94342549 94463211 - MGP_NODShiLtJ_P0041674 Tcf20 protein_coding protein_coding MGP_NODShiLtJ_T0041823.1 MGP_NODShiLtJ_G0022032.1 mouse_genomes_project 15 99576816 99712535 + MGP_NODShiLtJ_P0041823 Fam19a5 protein_coding protein_coding MGP_NODShiLtJ_T0101670.1 MGP_NODShiLtJ_G0039839.1 mouse_genomes_project 15 111454498 111460290 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0042006.1 MGP_NODShiLtJ_G0022080.1 mouse_genomes_project 15 104847884 105249852 + MGP_NODShiLtJ_P0042006 Pdzrn4 protein_coding protein_coding MGP_NODShiLtJ_T0042007.1 MGP_NODShiLtJ_G0022080.1 mouse_genomes_project 15 105072396 105249852 + MGP_NODShiLtJ_P0042007 Pdzrn4 protein_coding protein_coding MGP_NODShiLtJ_T0012949.1 MGP_NODShiLtJ_G0011057.1 mouse_genomes_project 15 41591679 41592152 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041492.1 MGP_NODShiLtJ_G0021924.1 mouse_genomes_project 15 91290260 91319825 + MGP_NODShiLtJ_P0041492 Tab1 protein_coding protein_coding MGP_NODShiLtJ_T0041701.1 MGP_NODShiLtJ_G0021989.1 mouse_genomes_project 15 94815953 94846255 - MGP_NODShiLtJ_P0041701 A4galt protein_coding protein_coding MGP_NODShiLtJ_T0041702.1 MGP_NODShiLtJ_G0021989.1 mouse_genomes_project 15 94815953 94846212 - MGP_NODShiLtJ_P0041702 A4galt protein_coding protein_coding MGP_NODShiLtJ_T0040655.1 MGP_NODShiLtJ_G0021686.1 mouse_genomes_project 15 63070285 63156605 - MGP_NODShiLtJ_P0040655 Enpp2 protein_coding protein_coding MGP_NODShiLtJ_T0040656.1 MGP_NODShiLtJ_G0021686.1 mouse_genomes_project 15 63070288 63156461 - MGP_NODShiLtJ_P0040656 Enpp2 protein_coding protein_coding MGP_NODShiLtJ_T0040657.1 MGP_NODShiLtJ_G0021686.1 mouse_genomes_project 15 63070656 63156477 - MGP_NODShiLtJ_P0040657 Enpp2 protein_coding protein_coding MGP_NODShiLtJ_T0040658.1 MGP_NODShiLtJ_G0021686.1 mouse_genomes_project 15 63070753 63156420 - MGP_NODShiLtJ_P0040658 Enpp2 protein_coding protein_coding MGP_NODShiLtJ_T0040518.1 MGP_NODShiLtJ_G0021632.1 mouse_genomes_project 15 40496194 40550292 - MGP_NODShiLtJ_P0040518 Snx31 protein_coding protein_coding MGP_NODShiLtJ_T0040519.1 MGP_NODShiLtJ_G0021632.1 mouse_genomes_project 15 40496544 40550287 - MGP_NODShiLtJ_P0040519 Snx31 protein_coding protein_coding MGP_NODShiLtJ_T0040520.1 MGP_NODShiLtJ_G0021632.1 mouse_genomes_project 15 40530872 40538982 - Snx31 protein_coding processed_transcript MGP_NODShiLtJ_T0040521.1 MGP_NODShiLtJ_G0021632.1 mouse_genomes_project 15 40530872 40539440 - MGP_NODShiLtJ_P0040521 Snx31 protein_coding protein_coding MGP_NODShiLtJ_T0011274.1 MGP_NODShiLtJ_G0009407.1 mouse_genomes_project 15 39965577 39965832 + Gm25372 misc_RNA misc_RNA MGP_NODShiLtJ_T0040290.1 MGP_NODShiLtJ_G0021552.1 mouse_genomes_project 15 6977489 7015316 + protein_coding processed_transcript MGP_NODShiLtJ_T0040291.1 MGP_NODShiLtJ_G0021552.1 mouse_genomes_project 15 6985237 7011006 + protein_coding processed_transcript MGP_NODShiLtJ_T0040292.1 MGP_NODShiLtJ_G0021552.1 mouse_genomes_project 15 6985239 7010928 + protein_coding processed_transcript MGP_NODShiLtJ_T0040293.1 MGP_NODShiLtJ_G0021552.1 mouse_genomes_project 15 6985343 7019802 + MGP_NODShiLtJ_P0040293 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040294.1 MGP_NODShiLtJ_G0021552.1 mouse_genomes_project 15 6988902 6997477 + MGP_NODShiLtJ_P0040294 protein_coding protein_coding MGP_NODShiLtJ_T0012968.1 MGP_NODShiLtJ_G0011076.1 mouse_genomes_project 15 83972778 83978632 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042440.1 MGP_NODShiLtJ_G0022236.1 mouse_genomes_project 15 115645723 115670800 - MGP_NODShiLtJ_P0042440 Rarg protein_coding protein_coding MGP_NODShiLtJ_T0042441.1 MGP_NODShiLtJ_G0022236.1 mouse_genomes_project 15 115645725 115658227 - MGP_NODShiLtJ_P0042441 Rarg protein_coding protein_coding MGP_NODShiLtJ_T0042442.1 MGP_NODShiLtJ_G0022236.1 mouse_genomes_project 15 115650771 115670632 - MGP_NODShiLtJ_P0042442 Rarg protein_coding protein_coding MGP_NODShiLtJ_T0042443.1 MGP_NODShiLtJ_G0022236.1 mouse_genomes_project 15 115652666 115654317 - Rarg protein_coding processed_transcript MGP_NODShiLtJ_T0042444.1 MGP_NODShiLtJ_G0022236.1 mouse_genomes_project 15 115652670 115656958 - Rarg protein_coding processed_transcript MGP_NODShiLtJ_T0042445.1 MGP_NODShiLtJ_G0022236.1 mouse_genomes_project 15 115652670 115663629 - Rarg protein_coding processed_transcript MGP_NODShiLtJ_T0041970.1 MGP_NODShiLtJ_G0022070.1 mouse_genomes_project 15 101899574 101967693 - MGP_NODShiLtJ_P0041970 Syt10 protein_coding protein_coding MGP_NODShiLtJ_T0041320.1 MGP_NODShiLtJ_G0021882.1 mouse_genomes_project 15 89807771 89836411 - MGP_NODShiLtJ_P0041320 Card10 protein_coding protein_coding MGP_NODShiLtJ_T0041321.1 MGP_NODShiLtJ_G0021882.1 mouse_genomes_project 15 89808752 89836038 - MGP_NODShiLtJ_P0041321 Card10 protein_coding protein_coding MGP_NODShiLtJ_T0041322.1 MGP_NODShiLtJ_G0021882.1 mouse_genomes_project 15 89819552 89822691 - Card10 protein_coding processed_transcript MGP_NODShiLtJ_T0009981.1 MGP_NODShiLtJ_G0008114.1 mouse_genomes_project 15 94167845 94167902 - Gm27463 miRNA miRNA MGP_NODShiLtJ_T0042530.1 MGP_NODShiLtJ_G0022255.1 mouse_genomes_project 15 116399252 116406950 + MGP_NODShiLtJ_P0042530 Hoxc13 protein_coding protein_coding MGP_NODShiLtJ_T0042395.1 MGP_NODShiLtJ_G0022207.1 mouse_genomes_project 15 114795751 114802998 + MGP_NODShiLtJ_P0042395 Krt86 protein_coding protein_coding MGP_NODShiLtJ_T0042132.1 MGP_NODShiLtJ_G0022118.1 mouse_genomes_project 15 111217436 111218762 - MGP_NODShiLtJ_P0042132 H1fnt protein_coding protein_coding MGP_NODShiLtJ_T0040729.1 MGP_NODShiLtJ_G0021712.1 mouse_genomes_project 15 67452979 67453711 - MGP_NODShiLtJ_P0040729 Ube2d4 protein_coding protein_coding MGP_NODShiLtJ_T0041779.1 MGP_NODShiLtJ_G0022018.1 mouse_genomes_project 15 96970024 97059785 + MGP_NODShiLtJ_P0041779 Fbln1 protein_coding protein_coding MGP_NODShiLtJ_T0041780.1 MGP_NODShiLtJ_G0022018.1 mouse_genomes_project 15 96970080 97022963 + MGP_NODShiLtJ_P0041780 Fbln1 protein_coding protein_coding MGP_NODShiLtJ_T0041781.1 MGP_NODShiLtJ_G0022018.1 mouse_genomes_project 15 97034527 97036546 + Fbln1 protein_coding processed_transcript MGP_NODShiLtJ_T0042269.1 MGP_NODShiLtJ_G0022168.1 mouse_genomes_project 15 112835791 112848231 + MGP_NODShiLtJ_P0042269 Smarcd1 protein_coding protein_coding MGP_NODShiLtJ_T0009963.1 MGP_NODShiLtJ_G0008096.1 mouse_genomes_project 15 86987649 86987717 + Mir6953 miRNA miRNA MGP_NODShiLtJ_T0041930.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101486911 101504648 - Chkb protein_coding retained_intron MGP_NODShiLtJ_T0041935.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101500319 101504812 - Chkb protein_coding retained_intron MGP_NODShiLtJ_T0041936.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101500319 101501121 - Chkb protein_coding processed_transcript MGP_NODShiLtJ_T0041937.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101500326 101504391 - Chkb protein_coding retained_intron MGP_NODShiLtJ_T0041938.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101500326 101504851 - MGP_NODShiLtJ_P0041938 Chkb protein_coding protein_coding MGP_NODShiLtJ_T0041939.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101500400 101502453 - MGP_NODShiLtJ_P0041939 Chkb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041940.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101500427 101501119 - Chkb protein_coding retained_intron MGP_NODShiLtJ_T0041941.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101501074 101504860 - Chkb protein_coding retained_intron MGP_NODShiLtJ_T0041942.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101501339 101504382 - Chkb protein_coding retained_intron MGP_NODShiLtJ_T0041943.1 MGP_NODShiLtJ_G0022062.1 mouse_genomes_project 15 101501594 101503053 - MGP_NODShiLtJ_P0041943 Chkb protein_coding protein_coding MGP_NODShiLtJ_T0040995.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86598677 86613279 - MGP_NODShiLtJ_P0040995 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0040996.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86598681 86613258 - MGP_NODShiLtJ_P0040996 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0040997.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86598681 86613264 - MGP_NODShiLtJ_P0040997 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0040998.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86599369 86613221 - MGP_NODShiLtJ_P0040998 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0040999.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86599369 86613230 - MGP_NODShiLtJ_P0040999 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041000.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86599369 86607482 - MGP_NODShiLtJ_P0041000 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041001.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86599371 86613243 - MGP_NODShiLtJ_P0041001 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041002.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86599371 86613259 - MGP_NODShiLtJ_P0041002 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041003.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86599373 86600622 - Eef1d protein_coding retained_intron MGP_NODShiLtJ_T0041004.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86599685 86613253 - MGP_NODShiLtJ_P0041004 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041005.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86600155 86613480 - MGP_NODShiLtJ_P0041005 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041006.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86600162 86613243 - MGP_NODShiLtJ_P0041006 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041007.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86600275 86613471 - MGP_NODShiLtJ_P0041007 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041008.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86600557 86605179 - Eef1d protein_coding retained_intron MGP_NODShiLtJ_T0041009.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86601987 86613243 - Eef1d protein_coding retained_intron MGP_NODShiLtJ_T0041010.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86607048 86613471 - MGP_NODShiLtJ_P0041010 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041011.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86607187 86609289 - MGP_NODShiLtJ_P0041011 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0041012.1 MGP_NODShiLtJ_G0021799.1 mouse_genomes_project 15 86607431 86613215 - MGP_NODShiLtJ_P0041012 Eef1d protein_coding protein_coding MGP_NODShiLtJ_T0006698.1 MGP_NODShiLtJ_G0005526.1 mouse_genomes_project 15 47421202 47452338 + Gm17473 lincRNA lincRNA MGP_NODShiLtJ_T0006720.1 MGP_NODShiLtJ_G0005536.1 mouse_genomes_project 15 87947597 87959465 + 1700109K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0041015.1 MGP_NODShiLtJ_G0021802.1 mouse_genomes_project 15 86628778 86633950 - MGP_NODShiLtJ_P0041015 Tsta3 protein_coding protein_coding MGP_NODShiLtJ_T0006724.1 MGP_NODShiLtJ_G0005540.1 mouse_genomes_project 15 90875176 90891359 + Gm16576 lincRNA lincRNA MGP_NODShiLtJ_T0041909.1 MGP_NODShiLtJ_G0022055.1 mouse_genomes_project 15 101413707 101418363 - MGP_NODShiLtJ_P0041909 Lmf2 protein_coding protein_coding MGP_NODShiLtJ_T0101063.1 MGP_NODShiLtJ_G0039425.1 mouse_genomes_project 15 36950506 36952491 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101064.1 MGP_NODShiLtJ_G0039425.1 mouse_genomes_project 15 36951720 36952454 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0009936.1 MGP_NODShiLtJ_G0008069.1 mouse_genomes_project 15 3152844 3152958 + Gm27760 miRNA miRNA MGP_NODShiLtJ_T0009971.1 MGP_NODShiLtJ_G0008104.1 mouse_genomes_project 15 91138570 91138661 - Mir7213 miRNA miRNA MGP_NODShiLtJ_T0000918.1 MGP_NODShiLtJ_G0000847.1 mouse_genomes_project 15 70845789 70849889 - TEC TEC MGP_NODShiLtJ_T0040688.1 MGP_NODShiLtJ_G0021695.1 mouse_genomes_project 15 65038582 65070264 - MGP_NODShiLtJ_P0040688 Has2 protein_coding protein_coding MGP_NODShiLtJ_T0042124.1 MGP_NODShiLtJ_G0022116.1 mouse_genomes_project 15 111136699 111148406 - MGP_NODShiLtJ_P0042124 Olfr288 protein_coding protein_coding MGP_NODShiLtJ_T0041162.1 MGP_NODShiLtJ_G0021834.1 mouse_genomes_project 15 87328530 87331719 + MGP_NODShiLtJ_P0041162 Slc52a2 protein_coding protein_coding MGP_NODShiLtJ_T0006704.1 MGP_NODShiLtJ_G0005530.1 mouse_genomes_project 15 52567065 52585636 + 4930548G14Rik lincRNA lincRNA MGP_NODShiLtJ_T0006705.1 MGP_NODShiLtJ_G0005530.1 mouse_genomes_project 15 52569872 52570190 + 4930548G14Rik lincRNA lincRNA MGP_NODShiLtJ_T0011277.1 MGP_NODShiLtJ_G0009410.1 mouse_genomes_project 15 70923961 70924134 + Gm27913 misc_RNA misc_RNA MGP_NODShiLtJ_T0042317.1 MGP_NODShiLtJ_G0022186.1 mouse_genomes_project 15 113678136 113744423 - MGP_NODShiLtJ_P0042317 Tfcp2 protein_coding protein_coding MGP_NODShiLtJ_T0041925.1 MGP_NODShiLtJ_G0022059.1 mouse_genomes_project 15 101442170 101443974 - MGP_NODShiLtJ_P0041925 Odf3b protein_coding protein_coding MGP_NODShiLtJ_T0041926.1 MGP_NODShiLtJ_G0022059.1 mouse_genomes_project 15 101442226 101443898 - MGP_NODShiLtJ_P0041926 Odf3b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040195.1 MGP_NODShiLtJ_G0021527.1 mouse_genomes_project 15 1847153 1929084 + MGP_NODShiLtJ_P0040195 C6 protein_coding protein_coding MGP_NODShiLtJ_T0040196.1 MGP_NODShiLtJ_G0021527.1 mouse_genomes_project 15 1847194 1875263 + MGP_NODShiLtJ_P0040196 C6 protein_coding protein_coding MGP_NODShiLtJ_T0040197.1 MGP_NODShiLtJ_G0021527.1 mouse_genomes_project 15 1847194 1926910 + MGP_NODShiLtJ_P0040197 C6 protein_coding protein_coding MGP_NODShiLtJ_T0040198.1 MGP_NODShiLtJ_G0021527.1 mouse_genomes_project 15 1847262 1952328 + MGP_NODShiLtJ_P0040198 C6 protein_coding protein_coding MGP_NODShiLtJ_T0040199.1 MGP_NODShiLtJ_G0021527.1 mouse_genomes_project 15 1858201 1909137 + MGP_NODShiLtJ_P0040199 C6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040200.1 MGP_NODShiLtJ_G0021527.1 mouse_genomes_project 15 1889776 1909044 + C6 protein_coding processed_transcript MGP_NODShiLtJ_T0041743.1 MGP_NODShiLtJ_G0022003.1 mouse_genomes_project 15 95880260 95903265 + MGP_NODShiLtJ_P0041743 Samm50 protein_coding protein_coding MGP_NODShiLtJ_T0040398.1 MGP_NODShiLtJ_G0021584.1 mouse_genomes_project 15 22236455 22801233 + MGP_NODShiLtJ_P0040398 Cdh12 protein_coding protein_coding MGP_NODShiLtJ_T0041599.1 MGP_NODShiLtJ_G0021952.1 mouse_genomes_project 15 93149328 93159373 - MGP_NODShiLtJ_P0041599 Tob2 protein_coding protein_coding MGP_NODShiLtJ_T0100185.1 MGP_NODShiLtJ_G0038579.1 mouse_genomes_project 15 107319010 107319142 - Gm25546 snoRNA snoRNA MGP_NODShiLtJ_T0041348.1 MGP_NODShiLtJ_G0021891.1 mouse_genomes_project 15 90101241 90109906 + MGP_NODShiLtJ_P0041348 Gcat protein_coding protein_coding MGP_NODShiLtJ_T0041349.1 MGP_NODShiLtJ_G0021891.1 mouse_genomes_project 15 90101241 90114079 + MGP_NODShiLtJ_P0041349 Gcat protein_coding protein_coding MGP_NODShiLtJ_T0041350.1 MGP_NODShiLtJ_G0021891.1 mouse_genomes_project 15 90113432 90115106 + MGP_NODShiLtJ_P0041350 Gcat protein_coding protein_coding MGP_NODShiLtJ_T0006701.1 MGP_NODShiLtJ_G0005529.1 mouse_genomes_project 15 52115865 52201543 + lincRNA lincRNA MGP_NODShiLtJ_T0006702.1 MGP_NODShiLtJ_G0005529.1 mouse_genomes_project 15 52115877 52167737 + lincRNA lincRNA MGP_NODShiLtJ_T0006703.1 MGP_NODShiLtJ_G0005529.1 mouse_genomes_project 15 52115891 52201592 + lincRNA lincRNA MGP_NODShiLtJ_T0041013.1 MGP_NODShiLtJ_G0021800.1 mouse_genomes_project 15 86613658 86618440 + MGP_NODShiLtJ_P0041013 Tigd5 protein_coding protein_coding MGP_NODShiLtJ_T0041832.1 MGP_NODShiLtJ_G0022036.1 mouse_genomes_project 15 100835063 100846249 - Alg12 protein_coding retained_intron MGP_NODShiLtJ_T0041833.1 MGP_NODShiLtJ_G0022036.1 mouse_genomes_project 15 100835063 100849395 - MGP_NODShiLtJ_P0041833 Alg12 protein_coding protein_coding MGP_NODShiLtJ_T0041834.1 MGP_NODShiLtJ_G0022036.1 mouse_genomes_project 15 100835064 100849362 - MGP_NODShiLtJ_P0041834 Alg12 protein_coding protein_coding MGP_NODShiLtJ_T0041835.1 MGP_NODShiLtJ_G0022036.1 mouse_genomes_project 15 100844685 100849169 - MGP_NODShiLtJ_P0041835 Alg12 protein_coding protein_coding MGP_NODShiLtJ_T0042428.1 MGP_NODShiLtJ_G0022233.1 mouse_genomes_project 15 115582827 115613568 - MGP_NODShiLtJ_P0042428 Csad protein_coding protein_coding MGP_NODShiLtJ_T0011288.1 MGP_NODShiLtJ_G0009421.1 mouse_genomes_project 15 115935499 115935681 + Gm27406 misc_RNA misc_RNA MGP_NODShiLtJ_T0042041.1 MGP_NODShiLtJ_G0022090.1 mouse_genomes_project 15 107262672 107788309 + MGP_NODShiLtJ_P0042041 Tmem117 protein_coding protein_coding MGP_NODShiLtJ_T0009945.1 MGP_NODShiLtJ_G0008078.1 mouse_genomes_project 15 39542437 39542515 - Mir875 miRNA miRNA MGP_NODShiLtJ_T0100150.1 MGP_NODShiLtJ_G0038544.1 mouse_genomes_project 15 21940888 21941016 + Gm25711 snoRNA snoRNA MGP_NODShiLtJ_T0041819.1 MGP_NODShiLtJ_G0022030.1 mouse_genomes_project 15 97992904 98013979 - Cerk protein_coding retained_intron MGP_NODShiLtJ_T0041820.1 MGP_NODShiLtJ_G0022030.1 mouse_genomes_project 15 97992905 98044259 - MGP_NODShiLtJ_P0041820 Cerk protein_coding protein_coding MGP_NODShiLtJ_T0041821.1 MGP_NODShiLtJ_G0022030.1 mouse_genomes_project 15 97994100 98006289 - MGP_NODShiLtJ_P0041821 Cerk protein_coding protein_coding MGP_NODShiLtJ_T0011270.1 MGP_NODShiLtJ_G0009403.1 mouse_genomes_project 15 3899697 3899973 + Gm23218 misc_RNA misc_RNA MGP_NODShiLtJ_T0040619.1 MGP_NODShiLtJ_G0021670.1 mouse_genomes_project 15 50431453 50439583 - MGP_NODShiLtJ_P0040619 Kcnv1 protein_coding protein_coding MGP_NODShiLtJ_T0100177.1 MGP_NODShiLtJ_G0038571.1 mouse_genomes_project 15 79193927 79194059 - Gm24232 snoRNA snoRNA MGP_NODShiLtJ_T0040347.1 MGP_NODShiLtJ_G0021571.1 mouse_genomes_project 15 9887244 9975270 - MGP_NODShiLtJ_P0040347 Npr3 protein_coding protein_coding MGP_NODShiLtJ_T0040581.1 MGP_NODShiLtJ_G0021651.1 mouse_genomes_project 15 43296859 44023102 + MGP_NODShiLtJ_P0040581 protein_coding protein_coding MGP_NODShiLtJ_T0040582.1 MGP_NODShiLtJ_G0021651.1 mouse_genomes_project 15 43296890 44022926 + MGP_NODShiLtJ_P0040582 protein_coding protein_coding MGP_NODShiLtJ_T0040583.1 MGP_NODShiLtJ_G0021651.1 mouse_genomes_project 15 43999682 44022926 + MGP_NODShiLtJ_P0040583 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042545.1 MGP_NODShiLtJ_G0022264.1 mouse_genomes_project 15 116644757 116649453 - MGP_NODShiLtJ_P0042545 Smug1 protein_coding protein_coding MGP_NODShiLtJ_T0042008.1 MGP_NODShiLtJ_G0022081.1 mouse_genomes_project 15 105779519 105817954 - MGP_NODShiLtJ_P0042008 Gxylt1 protein_coding protein_coding MGP_NODShiLtJ_T0042009.1 MGP_NODShiLtJ_G0022081.1 mouse_genomes_project 15 105784223 105817944 - MGP_NODShiLtJ_P0042009 Gxylt1 protein_coding protein_coding MGP_NODShiLtJ_T0040842.1 MGP_NODShiLtJ_G0021746.1 mouse_genomes_project 15 76599747 76621736 - MGP_NODShiLtJ_P0040842 St3gal1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101666.1 MGP_NODShiLtJ_G0039835.1 mouse_genomes_project 15 85920653 85924059 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0042412.1 MGP_NODShiLtJ_G0022222.1 mouse_genomes_project 15 115261420 115269990 - MGP_NODShiLtJ_P0042412 Krt76 protein_coding protein_coding MGP_NODShiLtJ_T0040638.1 MGP_NODShiLtJ_G0021675.1 mouse_genomes_project 15 59821407 59854400 - MGP_NODShiLtJ_P0040638 Rad21 protein_coding protein_coding MGP_NODShiLtJ_T0041849.1 MGP_NODShiLtJ_G0022042.1 mouse_genomes_project 15 101092582 101102660 + MGP_NODShiLtJ_P0041849 Panx2 protein_coding protein_coding MGP_NODShiLtJ_T0041850.1 MGP_NODShiLtJ_G0022042.1 mouse_genomes_project 15 101092595 101103696 + MGP_NODShiLtJ_P0041850 Panx2 protein_coding protein_coding MGP_NODShiLtJ_T0041851.1 MGP_NODShiLtJ_G0022042.1 mouse_genomes_project 15 101102454 101106333 + MGP_NODShiLtJ_P0041851 Panx2 protein_coding protein_coding MGP_NODShiLtJ_T0041664.1 MGP_NODShiLtJ_G0021975.1 mouse_genomes_project 15 93759857 93766093 - MGP_NODShiLtJ_P0041664 Cyp2d11 protein_coding protein_coding MGP_NODShiLtJ_T0041081.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87044305 87056036 - MGP_NODShiLtJ_P0041081 Oplah protein_coding protein_coding MGP_NODShiLtJ_T0041082.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87044311 87045200 - Oplah protein_coding retained_intron MGP_NODShiLtJ_T0041083.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87044311 87056180 - MGP_NODShiLtJ_P0041083 Oplah protein_coding protein_coding MGP_NODShiLtJ_T0041084.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87045050 87045748 - Oplah protein_coding retained_intron MGP_NODShiLtJ_T0041085.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87048178 87048707 - Oplah protein_coding retained_intron MGP_NODShiLtJ_T0041086.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87048467 87051310 - Oplah protein_coding retained_intron MGP_NODShiLtJ_T0041087.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87048545 87056324 - MGP_NODShiLtJ_P0041087 Oplah protein_coding protein_coding MGP_NODShiLtJ_T0041088.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87051011 87052145 - Oplah protein_coding processed_transcript MGP_NODShiLtJ_T0041089.1 MGP_NODShiLtJ_G0021818.1 mouse_genomes_project 15 87055421 87088543 - MGP_NODShiLtJ_P0041089 Oplah protein_coding protein_coding MGP_NODShiLtJ_T0017327.1 MGP_NODShiLtJ_G0015170.1 mouse_genomes_project 15 88280967 88281647 - Gm20688 processed_transcript processed_transcript MGP_NODShiLtJ_T0041206.1 MGP_NODShiLtJ_G0021844.1 mouse_genomes_project 15 87533983 87536681 + MGP_NODShiLtJ_P0041206 Mfsd3 protein_coding protein_coding MGP_NODShiLtJ_T0006680.1 MGP_NODShiLtJ_G0005512.1 mouse_genomes_project 15 8622936 8628166 + 4930556M19Rik lincRNA lincRNA MGP_NODShiLtJ_T0041069.1 MGP_NODShiLtJ_G0021814.1 mouse_genomes_project 15 86963656 86966206 - MGP_NODShiLtJ_P0041069 Parp10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041070.1 MGP_NODShiLtJ_G0021814.1 mouse_genomes_project 15 86965485 86975884 - Parp10 protein_coding retained_intron MGP_NODShiLtJ_T0041071.1 MGP_NODShiLtJ_G0021814.1 mouse_genomes_project 15 86965485 86975870 - MGP_NODShiLtJ_P0041071 Parp10 protein_coding protein_coding MGP_NODShiLtJ_T0041072.1 MGP_NODShiLtJ_G0021814.1 mouse_genomes_project 15 86965485 86975891 - MGP_NODShiLtJ_P0041072 Parp10 protein_coding protein_coding MGP_NODShiLtJ_T0041073.1 MGP_NODShiLtJ_G0021814.1 mouse_genomes_project 15 86965872 86966736 - Parp10 protein_coding processed_transcript MGP_NODShiLtJ_T0041074.1 MGP_NODShiLtJ_G0021814.1 mouse_genomes_project 15 86966221 86966956 - Parp10 protein_coding retained_intron MGP_NODShiLtJ_T0042400.1 MGP_NODShiLtJ_G0022211.1 mouse_genomes_project 15 114902297 114913587 - MGP_NODShiLtJ_P0042400 Krt90 protein_coding protein_coding MGP_NODShiLtJ_T0040859.1 MGP_NODShiLtJ_G0021753.1 mouse_genomes_project 15 83429981 83433685 + MGP_NODShiLtJ_P0040859 Chrac1 protein_coding protein_coding MGP_NODShiLtJ_T0040860.1 MGP_NODShiLtJ_G0021753.1 mouse_genomes_project 15 83429981 83437163 + MGP_NODShiLtJ_P0040860 Chrac1 protein_coding protein_coding MGP_NODShiLtJ_T0040861.1 MGP_NODShiLtJ_G0021753.1 mouse_genomes_project 15 83430001 83434384 + Chrac1 protein_coding retained_intron MGP_NODShiLtJ_T0006729.1 MGP_NODShiLtJ_G0005544.1 mouse_genomes_project 15 94970506 94980234 - 1700001L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006730.1 MGP_NODShiLtJ_G0005544.1 mouse_genomes_project 15 94970514 94979963 - 1700001L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006731.1 MGP_NODShiLtJ_G0005544.1 mouse_genomes_project 15 94970540 94980229 - 1700001L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006732.1 MGP_NODShiLtJ_G0005544.1 mouse_genomes_project 15 94971598 94978094 - 1700001L05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006755.1 MGP_NODShiLtJ_G0005561.1 mouse_genomes_project 15 116423400 116427132 - Hotair lincRNA lincRNA MGP_NODShiLtJ_T0041030.1 MGP_NODShiLtJ_G0021808.1 mouse_genomes_project 15 86714438 86744426 + MGP_NODShiLtJ_P0041030 protein_coding protein_coding MGP_NODShiLtJ_T0041031.1 MGP_NODShiLtJ_G0021808.1 mouse_genomes_project 15 86719145 86743905 + MGP_NODShiLtJ_P0041031 protein_coding protein_coding MGP_NODShiLtJ_T0041032.1 MGP_NODShiLtJ_G0021808.1 mouse_genomes_project 15 86743438 86747023 + protein_coding processed_transcript MGP_NODShiLtJ_T0041033.1 MGP_NODShiLtJ_G0021808.1 mouse_genomes_project 15 86744137 86755375 + protein_coding processed_transcript MGP_NODShiLtJ_T0041034.1 MGP_NODShiLtJ_G0021808.1 mouse_genomes_project 15 86745824 86747084 + protein_coding retained_intron MGP_NODShiLtJ_T0041662.1 MGP_NODShiLtJ_G0021973.1 mouse_genomes_project 15 93696717 93701669 - MGP_NODShiLtJ_P0041662 Ndufa6 protein_coding protein_coding MGP_NODShiLtJ_T0041497.1 MGP_NODShiLtJ_G0021929.1 mouse_genomes_project 15 91457251 91576765 + MGP_NODShiLtJ_P0041497 Cacna1i protein_coding protein_coding MGP_NODShiLtJ_T0041498.1 MGP_NODShiLtJ_G0021929.1 mouse_genomes_project 15 91457547 91574248 + MGP_NODShiLtJ_P0041498 Cacna1i protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041499.1 MGP_NODShiLtJ_G0021929.1 mouse_genomes_project 15 91458737 91574160 + MGP_NODShiLtJ_P0041499 Cacna1i protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041500.1 MGP_NODShiLtJ_G0021929.1 mouse_genomes_project 15 91567759 91572316 + MGP_NODShiLtJ_P0041500 Cacna1i protein_coding protein_coding MGP_NODShiLtJ_T0041501.1 MGP_NODShiLtJ_G0021929.1 mouse_genomes_project 15 91567759 91569349 + MGP_NODShiLtJ_P0041501 Cacna1i protein_coding protein_coding MGP_NODShiLtJ_T0041502.1 MGP_NODShiLtJ_G0021929.1 mouse_genomes_project 15 91567759 91569349 + MGP_NODShiLtJ_P0041502 Cacna1i protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041503.1 MGP_NODShiLtJ_G0021929.1 mouse_genomes_project 15 91567759 91569349 + MGP_NODShiLtJ_P0041503 Cacna1i protein_coding protein_coding MGP_NODShiLtJ_T0042329.1 MGP_NODShiLtJ_G0022189.1 mouse_genomes_project 15 113830312 113847399 - MGP_NODShiLtJ_P0042329 Smagp protein_coding protein_coding MGP_NODShiLtJ_T0042330.1 MGP_NODShiLtJ_G0022189.1 mouse_genomes_project 15 113830312 113847389 - MGP_NODShiLtJ_P0042330 Smagp protein_coding protein_coding MGP_NODShiLtJ_T0041205.1 MGP_NODShiLtJ_G0021843.1 mouse_genomes_project 15 87523799 87532215 + MGP_NODShiLtJ_P0041205 Gpt protein_coding protein_coding MGP_NODShiLtJ_T0041434.1 MGP_NODShiLtJ_G0021913.1 mouse_genomes_project 15 90828198 90853580 + MGP_NODShiLtJ_P0041434 Gtpbp1 protein_coding protein_coding MGP_NODShiLtJ_T0100148.1 MGP_NODShiLtJ_G0038542.1 mouse_genomes_project 15 14973254 14973382 + Gm25550 snoRNA snoRNA MGP_NODShiLtJ_T0003577.1 MGP_NODShiLtJ_G0003237.1 mouse_genomes_project 15 112849778 112858625 - Gm16537 antisense antisense MGP_NODShiLtJ_T0003545.1 MGP_NODShiLtJ_G0003212.1 mouse_genomes_project 15 66215553 66216481 - Gm16006 antisense antisense MGP_NODShiLtJ_T0012941.1 MGP_NODShiLtJ_G0011049.1 mouse_genomes_project 15 11645514 11647109 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101662.1 MGP_NODShiLtJ_G0039831.1 mouse_genomes_project 15 85812477 85814716 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098880.1 MGP_NODShiLtJ_G0037274.1 mouse_genomes_project 15 5804623 5804734 + Gm24144 snRNA snRNA MGP_NODShiLtJ_T0012989.1 MGP_NODShiLtJ_G0011097.1 mouse_genomes_project 15 112673367 112673724 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012958.1 MGP_NODShiLtJ_G0011066.1 mouse_genomes_project 15 62475582 62475987 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042385.1 MGP_NODShiLtJ_G0022202.1 mouse_genomes_project 15 114659558 114681082 - MGP_NODShiLtJ_P0042385 Krt80 protein_coding protein_coding MGP_NODShiLtJ_T0098917.1 MGP_NODShiLtJ_G0037311.1 mouse_genomes_project 15 98073273 98073377 - Gm22818 snRNA snRNA MGP_NODShiLtJ_T0012965.1 MGP_NODShiLtJ_G0011073.1 mouse_genomes_project 15 75335937 75336380 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040728.1 MGP_NODShiLtJ_G0021711.1 mouse_genomes_project 15 67385372 67429613 - MGP_NODShiLtJ_P0040728 Tmem65 protein_coding protein_coding MGP_NODShiLtJ_T0098896.1 MGP_NODShiLtJ_G0037290.1 mouse_genomes_project 15 60451624 60451728 + Gm23545 snRNA snRNA MGP_NODShiLtJ_T0040436.1 MGP_NODShiLtJ_G0021600.1 mouse_genomes_project 15 34483424 34533213 + MGP_NODShiLtJ_P0040436 Dap protein_coding protein_coding MGP_NODShiLtJ_T0040437.1 MGP_NODShiLtJ_G0021600.1 mouse_genomes_project 15 34483498 34534250 + MGP_NODShiLtJ_P0040437 Dap protein_coding protein_coding MGP_NODShiLtJ_T0040438.1 MGP_NODShiLtJ_G0021600.1 mouse_genomes_project 15 34483529 34533368 + MGP_NODShiLtJ_P0040438 Dap protein_coding protein_coding MGP_NODShiLtJ_T0040439.1 MGP_NODShiLtJ_G0021600.1 mouse_genomes_project 15 34528241 34533293 + MGP_NODShiLtJ_P0040439 Dap protein_coding protein_coding MGP_NODShiLtJ_T0006685.1 MGP_NODShiLtJ_G0005514.1 mouse_genomes_project 15 18161586 18289045 - lincRNA lincRNA MGP_NODShiLtJ_T0040880.1 MGP_NODShiLtJ_G0021758.1 mouse_genomes_project 15 84089890 84102651 - MGP_NODShiLtJ_P0040880 Gpr20 protein_coding protein_coding MGP_NODShiLtJ_T0040612.1 MGP_NODShiLtJ_G0021667.1 mouse_genomes_project 15 49678642 49858672 + MGP_NODShiLtJ_P0040612 protein_coding protein_coding MGP_NODShiLtJ_T0040613.1 MGP_NODShiLtJ_G0021667.1 mouse_genomes_project 15 49678642 49858666 + MGP_NODShiLtJ_P0040613 protein_coding protein_coding MGP_NODShiLtJ_T0040736.1 MGP_NODShiLtJ_G0021718.1 mouse_genomes_project 15 67950656 67966728 + Sqle protein_coding retained_intron MGP_NODShiLtJ_T0040737.1 MGP_NODShiLtJ_G0021718.1 mouse_genomes_project 15 67950660 67968960 + MGP_NODShiLtJ_P0040737 Sqle protein_coding protein_coding MGP_NODShiLtJ_T0040738.1 MGP_NODShiLtJ_G0021718.1 mouse_genomes_project 15 67950686 67968960 + MGP_NODShiLtJ_P0040738 Sqle protein_coding protein_coding MGP_NODShiLtJ_T0040739.1 MGP_NODShiLtJ_G0021718.1 mouse_genomes_project 15 67963308 67964972 + Sqle protein_coding retained_intron MGP_NODShiLtJ_T0040206.1 MGP_NODShiLtJ_G0021532.1 mouse_genomes_project 15 2312111 2356248 + MGP_NODShiLtJ_P0040206 Prkaa1 protein_coding protein_coding MGP_NODShiLtJ_T0100169.1 MGP_NODShiLtJ_G0038563.1 mouse_genomes_project 15 54244083 54244220 + Gm23530 snoRNA snoRNA MGP_NODShiLtJ_T0041161.1 MGP_NODShiLtJ_G0021833.1 mouse_genomes_project 15 87325311 87328334 - MGP_NODShiLtJ_P0041161 Fbxl6 protein_coding protein_coding MGP_NODShiLtJ_T0003554.1 MGP_NODShiLtJ_G0003220.1 mouse_genomes_project 15 85230998 85249286 + Gm17189 antisense antisense MGP_NODShiLtJ_T0042543.1 MGP_NODShiLtJ_G0022263.1 mouse_genomes_project 15 116499196 116519411 + MGP_NODShiLtJ_P0042543 Hoxc4 protein_coding protein_coding MGP_NODShiLtJ_T0042544.1 MGP_NODShiLtJ_G0022263.1 mouse_genomes_project 15 116517400 116519858 + MGP_NODShiLtJ_P0042544 Hoxc4 protein_coding protein_coding MGP_NODShiLtJ_T0042062.1 MGP_NODShiLtJ_G0022103.1 mouse_genomes_project 15 110123418 110277366 + MGP_NODShiLtJ_P0042062 Pced1b protein_coding protein_coding MGP_NODShiLtJ_T0040607.1 MGP_NODShiLtJ_G0021664.1 mouse_genomes_project 15 49373510 49415793 + MGP_NODShiLtJ_P0040607 Trhr protein_coding protein_coding MGP_NODShiLtJ_T0040608.1 MGP_NODShiLtJ_G0021664.1 mouse_genomes_project 15 49373608 49412843 + MGP_NODShiLtJ_P0040608 Trhr protein_coding protein_coding MGP_NODShiLtJ_T0009979.1 MGP_NODShiLtJ_G0008112.1 mouse_genomes_project 15 93968483 93968543 + Gm27825 miRNA miRNA MGP_NODShiLtJ_T0040485.1 MGP_NODShiLtJ_G0021619.1 mouse_genomes_project 15 38121798 38133448 - MGP_NODShiLtJ_P0040485 Rida protein_coding protein_coding MGP_NODShiLtJ_T0040486.1 MGP_NODShiLtJ_G0021619.1 mouse_genomes_project 15 38121801 38127601 - Rida protein_coding retained_intron MGP_NODShiLtJ_T0040487.1 MGP_NODShiLtJ_G0021619.1 mouse_genomes_project 15 38122671 38133364 - Rida protein_coding retained_intron MGP_NODShiLtJ_T0040488.1 MGP_NODShiLtJ_G0021619.1 mouse_genomes_project 15 38123381 38127487 - Rida protein_coding processed_transcript MGP_NODShiLtJ_T0040719.1 MGP_NODShiLtJ_G0021705.1 mouse_genomes_project 15 66682697 66701265 + MGP_NODShiLtJ_P0040719 Wdyhv1 protein_coding protein_coding MGP_NODShiLtJ_T0041621.1 MGP_NODShiLtJ_G0021959.1 mouse_genomes_project 15 93306718 93330329 - MGP_NODShiLtJ_P0041621 Desi1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041622.1 MGP_NODShiLtJ_G0021959.1 mouse_genomes_project 15 93306718 93330339 - MGP_NODShiLtJ_P0041622 Desi1 protein_coding protein_coding MGP_NODShiLtJ_T0041623.1 MGP_NODShiLtJ_G0021959.1 mouse_genomes_project 15 93308042 93330401 - MGP_NODShiLtJ_P0041623 Desi1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041624.1 MGP_NODShiLtJ_G0021959.1 mouse_genomes_project 15 93308840 93347693 - Desi1 protein_coding processed_transcript MGP_NODShiLtJ_T0041625.1 MGP_NODShiLtJ_G0021959.1 mouse_genomes_project 15 93308853 93330187 - MGP_NODShiLtJ_P0041625 Desi1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041626.1 MGP_NODShiLtJ_G0021959.1 mouse_genomes_project 15 93308916 93330213 - MGP_NODShiLtJ_P0041626 Desi1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003574.1 MGP_NODShiLtJ_G0003234.1 mouse_genomes_project 15 111570332 111572590 + 9330020H09Rik antisense antisense MGP_NODShiLtJ_T0040340.1 MGP_NODShiLtJ_G0021565.1 mouse_genomes_project 15 8874031 8913161 + MGP_NODShiLtJ_P0040340 C1qtnf3 protein_coding protein_coding MGP_NODShiLtJ_T0040341.1 MGP_NODShiLtJ_G0021565.1 mouse_genomes_project 15 8874056 8912717 + MGP_NODShiLtJ_P0040341 C1qtnf3 protein_coding protein_coding MGP_NODShiLtJ_T0041771.1 MGP_NODShiLtJ_G0022012.1 mouse_genomes_project 15 96668316 96687644 + MGP_NODShiLtJ_P0041771 Nup50 protein_coding protein_coding MGP_NODShiLtJ_T0041127.1 MGP_NODShiLtJ_G0021824.1 mouse_genomes_project 15 87125359 87133607 + MGP_NODShiLtJ_P0041127 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0041044.1 MGP_NODShiLtJ_G0021812.1 mouse_genomes_project 15 86830903 86838680 - MGP_NODShiLtJ_P0041044 BC024139 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041045.1 MGP_NODShiLtJ_G0021812.1 mouse_genomes_project 15 86830906 86838626 - MGP_NODShiLtJ_P0041045 BC024139 protein_coding protein_coding MGP_NODShiLtJ_T0041046.1 MGP_NODShiLtJ_G0021812.1 mouse_genomes_project 15 86830907 86838640 - MGP_NODShiLtJ_P0041046 BC024139 protein_coding protein_coding MGP_NODShiLtJ_T0041047.1 MGP_NODShiLtJ_G0021812.1 mouse_genomes_project 15 86834194 86838155 - BC024139 protein_coding processed_transcript MGP_NODShiLtJ_T0040589.1 MGP_NODShiLtJ_G0021654.1 mouse_genomes_project 15 44200618 44276306 - MGP_NODShiLtJ_P0040589 Lrp12 protein_coding protein_coding MGP_NODShiLtJ_T0040590.1 MGP_NODShiLtJ_G0021654.1 mouse_genomes_project 15 44200618 44276100 - MGP_NODShiLtJ_P0040590 Lrp12 protein_coding protein_coding MGP_NODShiLtJ_T0040591.1 MGP_NODShiLtJ_G0021654.1 mouse_genomes_project 15 44235071 44276018 - Lrp12 protein_coding retained_intron MGP_NODShiLtJ_T0011281.1 MGP_NODShiLtJ_G0009414.1 mouse_genomes_project 15 87011169 87011454 - Mirt2 misc_RNA misc_RNA MGP_NODShiLtJ_T0040805.1 MGP_NODShiLtJ_G0021737.1 mouse_genomes_project 15 75328893 75384678 - MGP_NODShiLtJ_P0040805 Hhla1 protein_coding protein_coding MGP_NODShiLtJ_T0040451.1 MGP_NODShiLtJ_G0021606.1 mouse_genomes_project 15 34897726 34908754 - MGP_NODShiLtJ_P0040451 Cct5 protein_coding protein_coding MGP_NODShiLtJ_T0040452.1 MGP_NODShiLtJ_G0021606.1 mouse_genomes_project 15 34898908 34899988 - Cct5 protein_coding retained_intron MGP_NODShiLtJ_T0040453.1 MGP_NODShiLtJ_G0021606.1 mouse_genomes_project 15 34900371 34901455 - Cct5 protein_coding retained_intron MGP_NODShiLtJ_T0040454.1 MGP_NODShiLtJ_G0021606.1 mouse_genomes_project 15 34901271 34908446 - MGP_NODShiLtJ_P0040454 Cct5 protein_coding protein_coding MGP_NODShiLtJ_T0040455.1 MGP_NODShiLtJ_G0021606.1 mouse_genomes_project 15 34902367 34908647 - Cct5 protein_coding retained_intron MGP_NODShiLtJ_T0012966.1 MGP_NODShiLtJ_G0011074.1 mouse_genomes_project 15 78553959 78554232 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003571.1 MGP_NODShiLtJ_G0003231.1 mouse_genomes_project 15 110683236 110689714 + Rapgef3os1 antisense antisense MGP_NODShiLtJ_T0042010.1 MGP_NODShiLtJ_G0022082.1 mouse_genomes_project 15 105827135 105883787 - MGP_NODShiLtJ_P0042010 Yaf2 protein_coding protein_coding MGP_NODShiLtJ_T0042011.1 MGP_NODShiLtJ_G0022082.1 mouse_genomes_project 15 105827138 105883911 - Yaf2 protein_coding processed_transcript MGP_NODShiLtJ_T0042119.1 MGP_NODShiLtJ_G0022114.1 mouse_genomes_project 15 111084851 111116470 - MGP_NODShiLtJ_P0042119 Asb8 protein_coding protein_coding MGP_NODShiLtJ_T0042120.1 MGP_NODShiLtJ_G0022114.1 mouse_genomes_project 15 111085928 111096785 - MGP_NODShiLtJ_P0042120 Asb8 protein_coding protein_coding MGP_NODShiLtJ_T0042121.1 MGP_NODShiLtJ_G0022114.1 mouse_genomes_project 15 111085928 111096738 - MGP_NODShiLtJ_P0042121 Asb8 protein_coding protein_coding MGP_NODShiLtJ_T0042122.1 MGP_NODShiLtJ_G0022114.1 mouse_genomes_project 15 111085928 111116405 - MGP_NODShiLtJ_P0042122 Asb8 protein_coding protein_coding MGP_NODShiLtJ_T0009938.1 MGP_NODShiLtJ_G0008071.1 mouse_genomes_project 15 10975693 10975833 + miRNA miRNA MGP_NODShiLtJ_T0017329.1 MGP_NODShiLtJ_G0015172.1 mouse_genomes_project 15 90406695 90408059 + Gm20420 processed_transcript processed_transcript MGP_NODShiLtJ_T0040701.1 MGP_NODShiLtJ_G0021700.1 mouse_genomes_project 15 66509225 66533598 + MGP_NODShiLtJ_P0040701 Fam83a protein_coding protein_coding MGP_NODShiLtJ_T0040702.1 MGP_NODShiLtJ_G0021700.1 mouse_genomes_project 15 66509716 66519399 + MGP_NODShiLtJ_P0040702 Fam83a protein_coding protein_coding MGP_NODShiLtJ_T0040703.1 MGP_NODShiLtJ_G0021700.1 mouse_genomes_project 15 66524686 66532636 + Fam83a protein_coding processed_transcript MGP_NODShiLtJ_T0040428.1 MGP_NODShiLtJ_G0021594.1 mouse_genomes_project 15 30120989 30257489 + MGP_NODShiLtJ_P0040428 Ank protein_coding protein_coding MGP_NODShiLtJ_T0040429.1 MGP_NODShiLtJ_G0021594.1 mouse_genomes_project 15 30234033 30255743 + Ank protein_coding retained_intron MGP_NODShiLtJ_T0041024.1 MGP_NODShiLtJ_G0021806.1 mouse_genomes_project 15 86698324 86700381 + Mapk15 protein_coding processed_transcript MGP_NODShiLtJ_T0041025.1 MGP_NODShiLtJ_G0021806.1 mouse_genomes_project 15 86698324 86703711 + MGP_NODShiLtJ_P0041025 Mapk15 protein_coding protein_coding MGP_NODShiLtJ_T0041026.1 MGP_NODShiLtJ_G0021806.1 mouse_genomes_project 15 86700495 86703711 + Mapk15 protein_coding retained_intron MGP_NODShiLtJ_T0041027.1 MGP_NODShiLtJ_G0021806.1 mouse_genomes_project 15 86701269 86703711 + Mapk15 protein_coding processed_transcript MGP_NODShiLtJ_T0041159.1 MGP_NODShiLtJ_G0021832.1 mouse_genomes_project 15 87299382 87306713 - MGP_NODShiLtJ_P0041159 Scrt1 protein_coding protein_coding MGP_NODShiLtJ_T0041160.1 MGP_NODShiLtJ_G0021832.1 mouse_genomes_project 15 87300980 87306647 - MGP_NODShiLtJ_P0041160 Scrt1 protein_coding protein_coding MGP_NODShiLtJ_T0097950.1 MGP_NODShiLtJ_G0036362.1 mouse_genomes_project 15 37168354 37168485 - Gm24476 rRNA rRNA MGP_NODShiLtJ_T0042381.1 MGP_NODShiLtJ_G0022198.1 mouse_genomes_project 15 114489602 114510360 + MGP_NODShiLtJ_P0042381 Acvr1b protein_coding protein_coding MGP_NODShiLtJ_T0012945.1 MGP_NODShiLtJ_G0011053.1 mouse_genomes_project 15 40077150 40079627 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097954.1 MGP_NODShiLtJ_G0036366.1 mouse_genomes_project 15 99088638 99088742 + n-R5s42 rRNA rRNA MGP_NODShiLtJ_T0041448.1 MGP_NODShiLtJ_G0021916.1 mouse_genomes_project 15 90923609 90941940 - MGP_NODShiLtJ_P0041448 Nptxr protein_coding protein_coding MGP_NODShiLtJ_T0041449.1 MGP_NODShiLtJ_G0021916.1 mouse_genomes_project 15 90923610 90941997 - MGP_NODShiLtJ_P0041449 Nptxr protein_coding protein_coding MGP_NODShiLtJ_T0041450.1 MGP_NODShiLtJ_G0021916.1 mouse_genomes_project 15 90926524 90928260 - Nptxr protein_coding processed_transcript MGP_NODShiLtJ_T0040508.1 MGP_NODShiLtJ_G0021627.1 mouse_genomes_project 15 39943313 40097657 - MGP_NODShiLtJ_P0040508 Rgs22 protein_coding protein_coding MGP_NODShiLtJ_T0040509.1 MGP_NODShiLtJ_G0021627.1 mouse_genomes_project 15 39943404 39977113 - MGP_NODShiLtJ_P0040509 Rgs22 protein_coding protein_coding MGP_NODShiLtJ_T0040510.1 MGP_NODShiLtJ_G0021627.1 mouse_genomes_project 15 39944163 40064236 - MGP_NODShiLtJ_P0040510 Rgs22 protein_coding protein_coding MGP_NODShiLtJ_T0040511.1 MGP_NODShiLtJ_G0021627.1 mouse_genomes_project 15 39985694 40029373 - MGP_NODShiLtJ_P0040511 Rgs22 protein_coding protein_coding MGP_NODShiLtJ_T0040512.1 MGP_NODShiLtJ_G0021627.1 mouse_genomes_project 15 40096385 40097642 - Rgs22 protein_coding retained_intron MGP_NODShiLtJ_T0012962.1 MGP_NODShiLtJ_G0011070.1 mouse_genomes_project 15 71129653 71130765 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098891.1 MGP_NODShiLtJ_G0037285.1 mouse_genomes_project 15 50233414 50233507 + Gm24768 snRNA snRNA MGP_NODShiLtJ_T0098886.1 MGP_NODShiLtJ_G0037280.1 mouse_genomes_project 15 38170044 38170154 + Gm22208 snRNA snRNA MGP_NODShiLtJ_T0041256.1 MGP_NODShiLtJ_G0021859.1 mouse_genomes_project 15 88457916 88462740 - MGP_NODShiLtJ_P0041256 1700025B11Rik protein_coding protein_coding MGP_NODShiLtJ_T0042085.1 MGP_NODShiLtJ_G0022108.1 mouse_genomes_project 15 110717982 110757383 - MGP_NODShiLtJ_P0042085 Hdac7 protein_coding protein_coding MGP_NODShiLtJ_T0042086.1 MGP_NODShiLtJ_G0022108.1 mouse_genomes_project 15 110717999 110757656 - MGP_NODShiLtJ_P0042086 Hdac7 protein_coding protein_coding MGP_NODShiLtJ_T0042087.1 MGP_NODShiLtJ_G0022108.1 mouse_genomes_project 15 110718005 110719767 - Hdac7 protein_coding retained_intron MGP_NODShiLtJ_T0042088.1 MGP_NODShiLtJ_G0022108.1 mouse_genomes_project 15 110718030 110757383 - MGP_NODShiLtJ_P0042088 Hdac7 protein_coding protein_coding MGP_NODShiLtJ_T0042089.1 MGP_NODShiLtJ_G0022108.1 mouse_genomes_project 15 110718047 110757266 - MGP_NODShiLtJ_P0042089 Hdac7 protein_coding protein_coding MGP_NODShiLtJ_T0042090.1 MGP_NODShiLtJ_G0022108.1 mouse_genomes_project 15 110723120 110757358 - MGP_NODShiLtJ_P0042090 Hdac7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042091.1 MGP_NODShiLtJ_G0022108.1 mouse_genomes_project 15 110724932 110732605 - MGP_NODShiLtJ_P0042091 Hdac7 protein_coding protein_coding MGP_NODShiLtJ_T0042092.1 MGP_NODShiLtJ_G0022108.1 mouse_genomes_project 15 110726593 110732956 - MGP_NODShiLtJ_P0042092 Hdac7 protein_coding protein_coding MGP_NODShiLtJ_T0040255.1 MGP_NODShiLtJ_G0021542.1 mouse_genomes_project 15 5291415 5317142 + MGP_NODShiLtJ_P0040255 Gdnf protein_coding protein_coding MGP_NODShiLtJ_T0041598.1 MGP_NODShiLtJ_G0021951.1 mouse_genomes_project 15 93144486 93144843 - MGP_NODShiLtJ_P0041598 Gm8444 protein_coding protein_coding MGP_NODShiLtJ_T0003573.1 MGP_NODShiLtJ_G0003233.1 mouse_genomes_project 15 111042516 111045005 + Gm26513 antisense antisense MGP_NODShiLtJ_T0011287.1 MGP_NODShiLtJ_G0009420.1 mouse_genomes_project 15 112264448 112264536 - Gm25057 misc_RNA misc_RNA MGP_NODShiLtJ_T0098895.1 MGP_NODShiLtJ_G0037289.1 mouse_genomes_project 15 56771865 56771971 + Gm23848 snRNA snRNA MGP_NODShiLtJ_T0017316.1 MGP_NODShiLtJ_G0015164.1 mouse_genomes_project 15 69556965 69563317 + 9930014A18Rik processed_transcript antisense MGP_NODShiLtJ_T0017317.1 MGP_NODShiLtJ_G0015164.1 mouse_genomes_project 15 69557646 69560306 + 9930014A18Rik processed_transcript TEC MGP_NODShiLtJ_T0017318.1 MGP_NODShiLtJ_G0015164.1 mouse_genomes_project 15 69558095 69558633 + 9930014A18Rik processed_transcript antisense MGP_NODShiLtJ_T0017319.1 MGP_NODShiLtJ_G0015164.1 mouse_genomes_project 15 69559034 69566460 + 9930014A18Rik processed_transcript antisense MGP_NODShiLtJ_T0041546.1 MGP_NODShiLtJ_G0021940.1 mouse_genomes_project 15 92611477 92648837 - MGP_NODShiLtJ_P0041546 St13 protein_coding protein_coding MGP_NODShiLtJ_T0041547.1 MGP_NODShiLtJ_G0021940.1 mouse_genomes_project 15 92613258 92648388 - MGP_NODShiLtJ_P0041547 St13 protein_coding protein_coding MGP_NODShiLtJ_T0041548.1 MGP_NODShiLtJ_G0021940.1 mouse_genomes_project 15 92625566 92648177 - MGP_NODShiLtJ_P0041548 St13 protein_coding protein_coding MGP_NODShiLtJ_T0041549.1 MGP_NODShiLtJ_G0021940.1 mouse_genomes_project 15 92638470 92648871 - MGP_NODShiLtJ_P0041549 St13 protein_coding protein_coding MGP_NODShiLtJ_T0041550.1 MGP_NODShiLtJ_G0021940.1 mouse_genomes_project 15 92641081 92648867 - MGP_NODShiLtJ_P0041550 St13 protein_coding protein_coding MGP_NODShiLtJ_T0003588.1 MGP_NODShiLtJ_G0003246.1 mouse_genomes_project 15 116588464 116591580 + Gm10830 antisense antisense MGP_NODShiLtJ_T0041526.1 MGP_NODShiLtJ_G0021936.1 mouse_genomes_project 15 92222368 92233461 + MGP_NODShiLtJ_P0041526 Sgsm3 protein_coding protein_coding MGP_NODShiLtJ_T0003535.1 MGP_NODShiLtJ_G0003204.1 mouse_genomes_project 15 1059640 1063149 - Gm15632 antisense antisense MGP_NODShiLtJ_T0042368.1 MGP_NODShiLtJ_G0022195.1 mouse_genomes_project 15 114329267 114333473 - MGP_NODShiLtJ_P0042368 Fignl2 protein_coding protein_coding MGP_NODShiLtJ_T0041759.1 MGP_NODShiLtJ_G0022008.1 mouse_genomes_project 15 96412669 96440398 + MGP_NODShiLtJ_P0041759 Prr5 protein_coding protein_coding MGP_NODShiLtJ_T0012985.1 MGP_NODShiLtJ_G0011093.1 mouse_genomes_project 15 103838483 103841377 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040881.1 MGP_NODShiLtJ_G0021759.1 mouse_genomes_project 15 84118258 84154012 + MGP_NODShiLtJ_P0040881 Ptp4a3 protein_coding protein_coding MGP_NODShiLtJ_T0040882.1 MGP_NODShiLtJ_G0021759.1 mouse_genomes_project 15 84118258 84154012 + MGP_NODShiLtJ_P0040882 Ptp4a3 protein_coding protein_coding MGP_NODShiLtJ_T0040883.1 MGP_NODShiLtJ_G0021759.1 mouse_genomes_project 15 84120041 84154012 + MGP_NODShiLtJ_P0040883 Ptp4a3 protein_coding protein_coding MGP_NODShiLtJ_T0040884.1 MGP_NODShiLtJ_G0021759.1 mouse_genomes_project 15 84143269 84154012 + MGP_NODShiLtJ_P0040884 Ptp4a3 protein_coding protein_coding MGP_NODShiLtJ_T0040721.1 MGP_NODShiLtJ_G0021707.1 mouse_genomes_project 15 66863741 66873398 - MGP_NODShiLtJ_P0040721 Klhl38 protein_coding protein_coding MGP_NODShiLtJ_T0040573.1 MGP_NODShiLtJ_G0021646.1 mouse_genomes_project 15 43002463 43020674 + MGP_NODShiLtJ_P0040573 Baalc protein_coding protein_coding MGP_NODShiLtJ_T0042578.1 MGP_NODShiLtJ_G0022275.1 mouse_genomes_project 15 117009448 117037458 + MGP_NODShiLtJ_P0042578 Pde1b protein_coding protein_coding MGP_NODShiLtJ_T0040788.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75181971 75186289 + Efr3a protein_coding processed_transcript MGP_NODShiLtJ_T0040789.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75181977 75276697 + MGP_NODShiLtJ_P0040789 Efr3a protein_coding protein_coding MGP_NODShiLtJ_T0040790.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75181978 75185772 + Efr3a protein_coding processed_transcript MGP_NODShiLtJ_T0040791.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75181978 75271301 + MGP_NODShiLtJ_P0040791 Efr3a protein_coding protein_coding MGP_NODShiLtJ_T0040792.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75181979 75230686 + Efr3a protein_coding processed_transcript MGP_NODShiLtJ_T0040793.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75181983 75226345 + MGP_NODShiLtJ_P0040793 Efr3a protein_coding protein_coding MGP_NODShiLtJ_T0040794.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75181985 75223418 + Efr3a protein_coding retained_intron MGP_NODShiLtJ_T0040795.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75181985 75220855 + MGP_NODShiLtJ_P0040795 Efr3a protein_coding protein_coding MGP_NODShiLtJ_T0040796.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75182777 75185778 + Efr3a protein_coding processed_transcript MGP_NODShiLtJ_T0040797.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75252614 75258965 + Efr3a protein_coding retained_intron MGP_NODShiLtJ_T0040798.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75257634 75259869 + Efr3a protein_coding retained_intron MGP_NODShiLtJ_T0040799.1 MGP_NODShiLtJ_G0021735.1 mouse_genomes_project 15 75259640 75269319 + Efr3a protein_coding retained_intron MGP_NODShiLtJ_T0100161.1 MGP_NODShiLtJ_G0038555.1 mouse_genomes_project 15 38077668 38077800 - Gm24523 snoRNA snoRNA MGP_NODShiLtJ_T0042058.1 MGP_NODShiLtJ_G0022099.1 mouse_genomes_project 15 109524174 109536466 - MGP_NODShiLtJ_P0042058 Slc38a2 protein_coding protein_coding MGP_NODShiLtJ_T0041129.1 MGP_NODShiLtJ_G0021826.1 mouse_genomes_project 15 87145427 87148406 - MGP_NODShiLtJ_P0041129 Tssk5 protein_coding protein_coding MGP_NODShiLtJ_T0012934.1 MGP_NODShiLtJ_G0011042.1 mouse_genomes_project 15 4790955 4791558 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009947.1 MGP_NODShiLtJ_G0008080.1 mouse_genomes_project 15 40584349 40584475 + Gm44310 miRNA miRNA MGP_NODShiLtJ_T0041889.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101341249 101369936 - MGP_NODShiLtJ_P0041889 Sbf1 protein_coding protein_coding MGP_NODShiLtJ_T0041890.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101341296 101369880 - MGP_NODShiLtJ_P0041890 Sbf1 protein_coding protein_coding MGP_NODShiLtJ_T0041891.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101341299 101369896 - MGP_NODShiLtJ_P0041891 Sbf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041892.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101341300 101347177 - MGP_NODShiLtJ_P0041892 Sbf1 protein_coding protein_coding MGP_NODShiLtJ_T0041893.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101341569 101341972 - Sbf1 protein_coding retained_intron MGP_NODShiLtJ_T0041894.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101342748 101346690 - Sbf1 protein_coding retained_intron MGP_NODShiLtJ_T0041895.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101346880 101348531 - Sbf1 protein_coding retained_intron MGP_NODShiLtJ_T0041896.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101352986 101353730 - Sbf1 protein_coding retained_intron MGP_NODShiLtJ_T0041897.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101353824 101355900 - Sbf1 protein_coding retained_intron MGP_NODShiLtJ_T0041898.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101355552 101356604 - MGP_NODShiLtJ_P0041898 Sbf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041899.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101356362 101358365 - Sbf1 protein_coding retained_intron MGP_NODShiLtJ_T0041900.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101358157 101359887 - Sbf1 protein_coding retained_intron MGP_NODShiLtJ_T0041901.1 MGP_NODShiLtJ_G0022052.1 mouse_genomes_project 15 101359280 101361070 - MGP_NODShiLtJ_P0041901 Sbf1 protein_coding protein_coding MGP_NODShiLtJ_T0100159.1 MGP_NODShiLtJ_G0038553.1 mouse_genomes_project 15 37738422 37738546 - Gm24500 snoRNA snoRNA MGP_NODShiLtJ_T0040910.1 MGP_NODShiLtJ_G0021765.1 mouse_genomes_project 15 85150418 85157647 - MGP_NODShiLtJ_P0040910 Jrk protein_coding protein_coding MGP_NODShiLtJ_T0041798.1 MGP_NODShiLtJ_G0022024.1 mouse_genomes_project 15 97629875 97636939 - MGP_NODShiLtJ_P0041798 Pkdrej protein_coding protein_coding MGP_NODShiLtJ_T0098901.1 MGP_NODShiLtJ_G0037295.1 mouse_genomes_project 15 68778052 68778159 + Gm25875 snRNA snRNA MGP_NODShiLtJ_T0003546.1 MGP_NODShiLtJ_G0003213.1 mouse_genomes_project 15 66244120 66246224 - 9330154K18Rik antisense antisense MGP_NODShiLtJ_T0040193.1 MGP_NODShiLtJ_G0021526.1 mouse_genomes_project 15 1425591 1595889 + MGP_NODShiLtJ_P0040193 Plcxd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040194.1 MGP_NODShiLtJ_G0021526.1 mouse_genomes_project 15 1425604 1665693 + MGP_NODShiLtJ_P0040194 Plcxd3 protein_coding protein_coding MGP_NODShiLtJ_T0041481.1 MGP_NODShiLtJ_G0021922.1 mouse_genomes_project 15 91226900 91233596 - Rpl3 protein_coding retained_intron MGP_NODShiLtJ_T0041482.1 MGP_NODShiLtJ_G0021922.1 mouse_genomes_project 15 91226901 91234366 - Rpl3 protein_coding retained_intron MGP_NODShiLtJ_T0041483.1 MGP_NODShiLtJ_G0021922.1 mouse_genomes_project 15 91226902 91234366 - MGP_NODShiLtJ_P0041483 Rpl3 protein_coding protein_coding MGP_NODShiLtJ_T0041484.1 MGP_NODShiLtJ_G0021922.1 mouse_genomes_project 15 91227972 91232907 - MGP_NODShiLtJ_P0041484 Rpl3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041485.1 MGP_NODShiLtJ_G0021922.1 mouse_genomes_project 15 91230824 91234346 - MGP_NODShiLtJ_P0041485 Rpl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041486.1 MGP_NODShiLtJ_G0021922.1 mouse_genomes_project 15 91231309 91246770 - MGP_NODShiLtJ_P0041486 Rpl3 protein_coding protein_coding MGP_NODShiLtJ_T0041487.1 MGP_NODShiLtJ_G0021922.1 mouse_genomes_project 15 91232396 91234350 - Rpl3 protein_coding retained_intron MGP_NODShiLtJ_T0040991.1 MGP_NODShiLtJ_G0021795.1 mouse_genomes_project 15 86445438 86540629 - MGP_NODShiLtJ_P0040991 Zc3h3 protein_coding protein_coding MGP_NODShiLtJ_T0041776.1 MGP_NODShiLtJ_G0022015.1 mouse_genomes_project 15 96794987 96821794 + MGP_NODShiLtJ_P0041776 Fam118a protein_coding protein_coding MGP_NODShiLtJ_T0041207.1 MGP_NODShiLtJ_G0021845.1 mouse_genomes_project 15 87535994 87543545 - MGP_NODShiLtJ_P0041207 Recql4 protein_coding protein_coding MGP_NODShiLtJ_T0012991.1 MGP_NODShiLtJ_G0011099.1 mouse_genomes_project 15 113049543 113049813 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003537.1 MGP_NODShiLtJ_G0003206.1 mouse_genomes_project 15 3677656 3684370 - Gm16311 antisense antisense MGP_NODShiLtJ_T0041927.1 MGP_NODShiLtJ_G0022060.1 mouse_genomes_project 15 101453438 101455479 + MGP_NODShiLtJ_P0041927 Klhdc7b protein_coding protein_coding MGP_NODShiLtJ_T0040478.1 MGP_NODShiLtJ_G0021617.1 mouse_genomes_project 15 38077382 38079789 - Rpl30 protein_coding processed_transcript MGP_NODShiLtJ_T0040479.1 MGP_NODShiLtJ_G0021617.1 mouse_genomes_project 15 38077382 38080041 - Rpl30 protein_coding retained_intron MGP_NODShiLtJ_T0040480.1 MGP_NODShiLtJ_G0021617.1 mouse_genomes_project 15 38077382 38080511 - MGP_NODShiLtJ_P0040480 Rpl30 protein_coding protein_coding MGP_NODShiLtJ_T0040481.1 MGP_NODShiLtJ_G0021617.1 mouse_genomes_project 15 38077387 38080103 - MGP_NODShiLtJ_P0040481 Rpl30 protein_coding protein_coding MGP_NODShiLtJ_T0040482.1 MGP_NODShiLtJ_G0021617.1 mouse_genomes_project 15 38077452 38078543 - Rpl30 protein_coding retained_intron MGP_NODShiLtJ_T0040483.1 MGP_NODShiLtJ_G0021617.1 mouse_genomes_project 15 38079401 38080140 - Rpl30 protein_coding processed_transcript MGP_NODShiLtJ_T0100171.1 MGP_NODShiLtJ_G0038565.1 mouse_genomes_project 15 61725697 61725829 - Gm23200 snoRNA snoRNA MGP_NODShiLtJ_T0011290.1 MGP_NODShiLtJ_G0009423.1 mouse_genomes_project 15 116426899 116426995 + Gm27443 misc_RNA misc_RNA MGP_NODShiLtJ_T0098882.1 MGP_NODShiLtJ_G0037276.1 mouse_genomes_project 15 22242361 22242468 + Gm25101 snRNA snRNA MGP_NODShiLtJ_T0041783.1 MGP_NODShiLtJ_G0022020.1 mouse_genomes_project 15 97287137 97297728 - MGP_NODShiLtJ_P0041783 7530416G11Rik protein_coding protein_coding MGP_NODShiLtJ_T0017331.1 MGP_NODShiLtJ_G0015174.1 mouse_genomes_project 15 92427284 92429280 + 4930483J18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017332.1 MGP_NODShiLtJ_G0015174.1 mouse_genomes_project 15 92427363 92429273 + 4930483J18Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0041048.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886615 86915516 - MGP_NODShiLtJ_P0041048 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041049.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886620 86925019 - MGP_NODShiLtJ_P0041049 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041050.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886620 86922175 - MGP_NODShiLtJ_P0041050 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041051.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886620 86915691 - MGP_NODShiLtJ_P0041051 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041052.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886620 86963861 - MGP_NODShiLtJ_P0041052 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041053.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886620 86924107 - MGP_NODShiLtJ_P0041053 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041054.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886621 86961980 - MGP_NODShiLtJ_P0041054 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041055.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886622 86922176 - MGP_NODShiLtJ_P0041055 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041056.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886622 86915691 - MGP_NODShiLtJ_P0041056 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041057.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886622 86911566 - MGP_NODShiLtJ_P0041057 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041058.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886622 86914065 - MGP_NODShiLtJ_P0041058 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041059.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86886622 86916463 - MGP_NODShiLtJ_P0041059 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041060.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86891028 86903891 - MGP_NODShiLtJ_P0041060 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041061.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86902458 86922175 - MGP_NODShiLtJ_P0041061 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041062.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86904311 86964528 - MGP_NODShiLtJ_P0041062 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041063.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86904311 86915691 - MGP_NODShiLtJ_P0041063 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041064.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86904311 86924107 - MGP_NODShiLtJ_P0041064 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041065.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86904388 86965053 - MGP_NODShiLtJ_P0041065 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041066.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86910248 86916463 - MGP_NODShiLtJ_P0041066 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041067.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86910248 86925019 - MGP_NODShiLtJ_P0041067 Plec protein_coding protein_coding MGP_NODShiLtJ_T0041068.1 MGP_NODShiLtJ_G0021813.1 mouse_genomes_project 15 86963217 86965057 - Plec protein_coding retained_intron MGP_NODShiLtJ_T0040957.1 MGP_NODShiLtJ_G0021786.1 mouse_genomes_project 15 85839022 85842955 + MGP_NODShiLtJ_P0040957 protein_coding protein_coding MGP_NODShiLtJ_T0040963.1 MGP_NODShiLtJ_G0021786.1 mouse_genomes_project 15 85839173 85842670 + MGP_NODShiLtJ_P0040963 protein_coding protein_coding MGP_NODShiLtJ_T0040964.1 MGP_NODShiLtJ_G0021786.1 mouse_genomes_project 15 85839307 85842958 + protein_coding retained_intron MGP_NODShiLtJ_T0040965.1 MGP_NODShiLtJ_G0021786.1 mouse_genomes_project 15 85839418 85842784 + MGP_NODShiLtJ_P0040965 protein_coding protein_coding MGP_NODShiLtJ_T0100149.1 MGP_NODShiLtJ_G0038543.1 mouse_genomes_project 15 20993609 20993739 + Gm25976 snoRNA snoRNA MGP_NODShiLtJ_T0041495.1 MGP_NODShiLtJ_G0021927.1 mouse_genomes_project 15 91424514 91426871 + MGP_NODShiLtJ_P0041495 Atf4 protein_coding protein_coding MGP_NODShiLtJ_T0009983.1 MGP_NODShiLtJ_G0008116.1 mouse_genomes_project 15 94510626 94510705 - Mir3080 miRNA miRNA MGP_NODShiLtJ_T0040691.1 MGP_NODShiLtJ_G0021697.1 mouse_genomes_project 15 66200998 66357448 + MGP_NODShiLtJ_P0040691 Zhx2 protein_coding protein_coding MGP_NODShiLtJ_T0040692.1 MGP_NODShiLtJ_G0021697.1 mouse_genomes_project 15 66203168 66335971 + Zhx2 protein_coding processed_transcript MGP_NODShiLtJ_T0040951.1 MGP_NODShiLtJ_G0021782.1 mouse_genomes_project 15 85698746 85700737 + MGP_NODShiLtJ_P0040951 Ly6g protein_coding protein_coding MGP_NODShiLtJ_T0040258.1 MGP_NODShiLtJ_G0021544.1 mouse_genomes_project 15 5679119 5732427 + MGP_NODShiLtJ_P0040258 Nup155 protein_coding protein_coding MGP_NODShiLtJ_T0042182.1 MGP_NODShiLtJ_G0022138.1 mouse_genomes_project 15 111806007 111812410 - MGP_NODShiLtJ_P0042182 Wnt10b protein_coding protein_coding MGP_NODShiLtJ_T0042183.1 MGP_NODShiLtJ_G0022138.1 mouse_genomes_project 15 111806454 111811521 - MGP_NODShiLtJ_P0042183 Wnt10b protein_coding protein_coding MGP_NODShiLtJ_T0040819.1 MGP_NODShiLtJ_G0021743.1 mouse_genomes_project 15 76259758 76311518 - MGP_NODShiLtJ_P0040819 Sla protein_coding protein_coding MGP_NODShiLtJ_T0040820.1 MGP_NODShiLtJ_G0021743.1 mouse_genomes_project 15 76259803 76292468 - MGP_NODShiLtJ_P0040820 Sla protein_coding protein_coding MGP_NODShiLtJ_T0040821.1 MGP_NODShiLtJ_G0021743.1 mouse_genomes_project 15 76261017 76281599 - MGP_NODShiLtJ_P0040821 Sla protein_coding protein_coding MGP_NODShiLtJ_T0040822.1 MGP_NODShiLtJ_G0021743.1 mouse_genomes_project 15 76261481 76311701 - MGP_NODShiLtJ_P0040822 Sla protein_coding protein_coding MGP_NODShiLtJ_T0040823.1 MGP_NODShiLtJ_G0021743.1 mouse_genomes_project 15 76264659 76283757 - Sla protein_coding retained_intron MGP_NODShiLtJ_T0041218.1 MGP_NODShiLtJ_G0021847.1 mouse_genomes_project 15 87548248 87555214 - MGP_NODShiLtJ_P0041218 Lrrc24 protein_coding protein_coding MGP_NODShiLtJ_T0041219.1 MGP_NODShiLtJ_G0021847.1 mouse_genomes_project 15 87549179 87551388 - Lrrc24 protein_coding retained_intron MGP_NODShiLtJ_T0041220.1 MGP_NODShiLtJ_G0021847.1 mouse_genomes_project 15 87552641 87555200 - Lrrc24 protein_coding retained_intron MGP_NODShiLtJ_T0041221.1 MGP_NODShiLtJ_G0021847.1 mouse_genomes_project 15 87554502 87556878 - MGP_NODShiLtJ_P0041221 Lrrc24 protein_coding protein_coding MGP_NODShiLtJ_T0041842.1 MGP_NODShiLtJ_G0022040.1 mouse_genomes_project 15 100998125 101020502 - MGP_NODShiLtJ_P0041842 Mlc1 protein_coding protein_coding MGP_NODShiLtJ_T0041843.1 MGP_NODShiLtJ_G0022040.1 mouse_genomes_project 15 100998125 101020502 - MGP_NODShiLtJ_P0041843 Mlc1 protein_coding protein_coding MGP_NODShiLtJ_T0009950.1 MGP_NODShiLtJ_G0008083.1 mouse_genomes_project 15 42393457 42393566 + Gm24098 miRNA miRNA MGP_NODShiLtJ_T0009946.1 MGP_NODShiLtJ_G0008079.1 mouse_genomes_project 15 40215229 40215348 - Mir8097 miRNA miRNA MGP_NODShiLtJ_T0012935.1 MGP_NODShiLtJ_G0011043.1 mouse_genomes_project 15 6185006 6185306 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012937.1 MGP_NODShiLtJ_G0011045.1 mouse_genomes_project 15 6622838 6635245 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040202.1 MGP_NODShiLtJ_G0021529.1 mouse_genomes_project 15 2114351 2201809 - MGP_NODShiLtJ_P0040202 C7 protein_coding protein_coding MGP_NODShiLtJ_T0100155.1 MGP_NODShiLtJ_G0038549.1 mouse_genomes_project 15 33134775 33134853 - Gm23327 snoRNA snoRNA MGP_NODShiLtJ_T0041635.1 MGP_NODShiLtJ_G0021960.1 mouse_genomes_project 15 93375878 93383256 + MGP_NODShiLtJ_P0041635 4930407I10Rik protein_coding protein_coding MGP_NODShiLtJ_T0100190.1 MGP_NODShiLtJ_G0038584.1 mouse_genomes_project 15 112217268 112217374 - Gm25183 snoRNA snoRNA MGP_NODShiLtJ_T0006728.1 MGP_NODShiLtJ_G0005543.1 mouse_genomes_project 15 94535928 94542192 + AW121686 lincRNA lincRNA MGP_NODShiLtJ_T0040865.1 MGP_NODShiLtJ_G0021756.1 mouse_genomes_project 15 83896686 83963030 + MGP_NODShiLtJ_P0040865 Dennd3 protein_coding protein_coding MGP_NODShiLtJ_T0040866.1 MGP_NODShiLtJ_G0021756.1 mouse_genomes_project 15 83896798 83962887 + MGP_NODShiLtJ_P0040866 Dennd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040867.1 MGP_NODShiLtJ_G0021756.1 mouse_genomes_project 15 83896872 83963021 + MGP_NODShiLtJ_P0040867 Dennd3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040868.1 MGP_NODShiLtJ_G0021756.1 mouse_genomes_project 15 83902635 83908484 + Dennd3 protein_coding processed_transcript MGP_NODShiLtJ_T0040869.1 MGP_NODShiLtJ_G0021756.1 mouse_genomes_project 15 83907251 83961742 + MGP_NODShiLtJ_P0040869 Dennd3 protein_coding protein_coding MGP_NODShiLtJ_T0040870.1 MGP_NODShiLtJ_G0021756.1 mouse_genomes_project 15 83946003 83958907 + MGP_NODShiLtJ_P0040870 Dennd3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040871.1 MGP_NODShiLtJ_G0021756.1 mouse_genomes_project 15 83955663 83957877 + Dennd3 protein_coding retained_intron MGP_NODShiLtJ_T0040872.1 MGP_NODShiLtJ_G0021756.1 mouse_genomes_project 15 83957877 83961687 + Dennd3 protein_coding retained_intron MGP_NODShiLtJ_T0012976.1 MGP_NODShiLtJ_G0011084.1 mouse_genomes_project 15 90800072 90824213 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041294.1 MGP_NODShiLtJ_G0021872.1 mouse_genomes_project 15 89419112 89426405 + MGP_NODShiLtJ_P0041294 Mpst protein_coding protein_coding MGP_NODShiLtJ_T0041295.1 MGP_NODShiLtJ_G0021872.1 mouse_genomes_project 15 89419201 89426405 + MGP_NODShiLtJ_P0041295 Mpst protein_coding protein_coding MGP_NODShiLtJ_T0041296.1 MGP_NODShiLtJ_G0021872.1 mouse_genomes_project 15 89419506 89426405 + MGP_NODShiLtJ_P0041296 Mpst protein_coding protein_coding MGP_NODShiLtJ_T0000912.1 MGP_NODShiLtJ_G0000841.1 mouse_genomes_project 15 5140438 5140814 - TEC TEC MGP_NODShiLtJ_T0042414.1 MGP_NODShiLtJ_G0022224.1 mouse_genomes_project 15 115310808 115321774 - MGP_NODShiLtJ_P0042414 Krt79 protein_coding protein_coding MGP_NODShiLtJ_T0003539.1 MGP_NODShiLtJ_G0003208.1 mouse_genomes_project 15 41298116 41299354 - Gm16136 antisense antisense MGP_NODShiLtJ_T0003540.1 MGP_NODShiLtJ_G0003208.1 mouse_genomes_project 15 41298134 41299504 - Gm16136 antisense antisense MGP_NODShiLtJ_T0003541.1 MGP_NODShiLtJ_G0003208.1 mouse_genomes_project 15 41298849 41299336 - Gm16136 antisense antisense MGP_NODShiLtJ_T0040433.1 MGP_NODShiLtJ_G0021597.1 mouse_genomes_project 15 30395646 30700053 - MGP_NODShiLtJ_P0040433 Trio protein_coding protein_coding MGP_NODShiLtJ_T0006690.1 MGP_NODShiLtJ_G0005518.1 mouse_genomes_project 15 41044636 41087534 + Gm26766 lincRNA lincRNA MGP_NODShiLtJ_T0040502.1 MGP_NODShiLtJ_G0021625.1 mouse_genomes_project 15 39123231 39852412 + MGP_NODShiLtJ_P0040502 Vps13b protein_coding protein_coding MGP_NODShiLtJ_T0100182.1 MGP_NODShiLtJ_G0038576.1 mouse_genomes_project 15 91228621 91228715 - Snord83b snoRNA snoRNA MGP_NODShiLtJ_T0040295.1 MGP_NODShiLtJ_G0021553.1 mouse_genomes_project 15 7034775 7074079 + MGP_NODShiLtJ_P0040295 Ugt3a2 protein_coding protein_coding MGP_NODShiLtJ_T0040296.1 MGP_NODShiLtJ_G0021553.1 mouse_genomes_project 15 7034814 7062473 + Ugt3a2 protein_coding retained_intron MGP_NODShiLtJ_T0042037.1 MGP_NODShiLtJ_G0022089.1 mouse_genomes_project 15 107214173 107227570 - MGP_NODShiLtJ_P0042037 Twf1 protein_coding protein_coding MGP_NODShiLtJ_T0042038.1 MGP_NODShiLtJ_G0022089.1 mouse_genomes_project 15 107217336 107223148 - Twf1 protein_coding processed_transcript MGP_NODShiLtJ_T0042039.1 MGP_NODShiLtJ_G0022089.1 mouse_genomes_project 15 107218690 107219057 - Twf1 protein_coding retained_intron MGP_NODShiLtJ_T0042040.1 MGP_NODShiLtJ_G0022089.1 mouse_genomes_project 15 107222113 107227580 - MGP_NODShiLtJ_P0042040 Twf1 protein_coding protein_coding MGP_NODShiLtJ_T0041698.1 MGP_NODShiLtJ_G0021988.1 mouse_genomes_project 15 94732804 94762181 - MGP_NODShiLtJ_P0041698 Cyb5r3 protein_coding protein_coding MGP_NODShiLtJ_T0041699.1 MGP_NODShiLtJ_G0021988.1 mouse_genomes_project 15 94739151 94760095 - MGP_NODShiLtJ_P0041699 Cyb5r3 protein_coding protein_coding MGP_NODShiLtJ_T0041700.1 MGP_NODShiLtJ_G0021988.1 mouse_genomes_project 15 94742472 94759766 - MGP_NODShiLtJ_P0041700 Cyb5r3 protein_coding protein_coding MGP_NODShiLtJ_T0041587.1 MGP_NODShiLtJ_G0021949.1 mouse_genomes_project 15 93032718 93093044 + MGP_NODShiLtJ_P0041587 Zc3h7b protein_coding protein_coding MGP_NODShiLtJ_T0012986.1 MGP_NODShiLtJ_G0011094.1 mouse_genomes_project 15 103866814 103867970 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041731.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95518248 95725974 - MGP_NODShiLtJ_P0041731 Efcab6 protein_coding protein_coding MGP_NODShiLtJ_T0041732.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95518250 95573489 - Efcab6 protein_coding processed_transcript MGP_NODShiLtJ_T0041733.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95518303 95590319 - Efcab6 protein_coding retained_intron MGP_NODShiLtJ_T0041734.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95518585 95713647 - MGP_NODShiLtJ_P0041734 Efcab6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041735.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95523908 95536402 - Efcab6 protein_coding processed_transcript MGP_NODShiLtJ_T0041736.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95579445 95600825 - MGP_NODShiLtJ_P0041736 Efcab6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041737.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95620502 95623147 - Efcab6 protein_coding processed_transcript MGP_NODShiLtJ_T0041738.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95627787 95644277 - Efcab6 protein_coding processed_transcript MGP_NODShiLtJ_T0041739.1 MGP_NODShiLtJ_G0021999.1 mouse_genomes_project 15 95677100 95726004 - Efcab6 protein_coding processed_transcript MGP_NODShiLtJ_T0040743.1 MGP_NODShiLtJ_G0021721.1 mouse_genomes_project 15 68319362 68327606 + MGP_NODShiLtJ_P0040743 Trib1 protein_coding protein_coding MGP_NODShiLtJ_T0040744.1 MGP_NODShiLtJ_G0021721.1 mouse_genomes_project 15 68319665 68324745 + MGP_NODShiLtJ_P0040744 Trib1 protein_coding protein_coding MGP_NODShiLtJ_T0041494.1 MGP_NODShiLtJ_G0021926.1 mouse_genomes_project 15 91404386 91419446 + MGP_NODShiLtJ_P0041494 Mief1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040967.1 MGP_NODShiLtJ_G0021788.1 mouse_genomes_project 15 86062762 86177312 + MGP_NODShiLtJ_P0040967 Ly6l protein_coding protein_coding MGP_NODShiLtJ_T0101423.1 MGP_NODShiLtJ_G0039619.1 mouse_genomes_project 15 72956180 73066318 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101424.1 MGP_NODShiLtJ_G0039619.1 mouse_genomes_project 15 73055418 73066529 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0101425.1 MGP_NODShiLtJ_G0039619.1 mouse_genomes_project 15 73061528 73064060 + unitary_pseudogene retained_intron MGP_NODShiLtJ_T0003578.1 MGP_NODShiLtJ_G0003238.1 mouse_genomes_project 15 112901212 112920043 + Gm17058 antisense antisense MGP_NODShiLtJ_T0042546.1 MGP_NODShiLtJ_G0022265.1 mouse_genomes_project 15 116683998 116732984 - MGP_NODShiLtJ_P0042546 Cbx5 protein_coding protein_coding MGP_NODShiLtJ_T0042547.1 MGP_NODShiLtJ_G0022265.1 mouse_genomes_project 15 116689140 116707802 - MGP_NODShiLtJ_P0042547 Cbx5 protein_coding protein_coding MGP_NODShiLtJ_T0042548.1 MGP_NODShiLtJ_G0022265.1 mouse_genomes_project 15 116691708 116707755 - MGP_NODShiLtJ_P0042548 Cbx5 protein_coding protein_coding MGP_NODShiLtJ_T0042549.1 MGP_NODShiLtJ_G0022265.1 mouse_genomes_project 15 116705532 116707816 - MGP_NODShiLtJ_P0042549 Cbx5 protein_coding protein_coding MGP_NODShiLtJ_T0040924.1 MGP_NODShiLtJ_G0021774.1 mouse_genomes_project 15 85243715 85248632 - MGP_NODShiLtJ_P0040924 Ly6k protein_coding protein_coding MGP_NODShiLtJ_T0040925.1 MGP_NODShiLtJ_G0021774.1 mouse_genomes_project 15 85243715 85248179 - MGP_NODShiLtJ_P0040925 Ly6k protein_coding protein_coding MGP_NODShiLtJ_T0012963.1 MGP_NODShiLtJ_G0011071.1 mouse_genomes_project 15 71996862 71997991 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012931.1 MGP_NODShiLtJ_G0011039.1 mouse_genomes_project 15 681204 682188 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042580.1 MGP_NODShiLtJ_G0022277.1 mouse_genomes_project 15 117069965 117072281 - MGP_NODShiLtJ_P0042580 Glycam1 protein_coding protein_coding MGP_NODShiLtJ_T0012950.1 MGP_NODShiLtJ_G0011058.1 mouse_genomes_project 15 41996628 41997033 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041422.1 MGP_NODShiLtJ_G0021907.1 mouse_genomes_project 15 90633438 90653257 - MGP_NODShiLtJ_P0041422 Ddx17 protein_coding protein_coding MGP_NODShiLtJ_T0040448.1 MGP_NODShiLtJ_G0021605.1 mouse_genomes_project 15 34875818 34895197 + MGP_NODShiLtJ_P0040448 Cmbl protein_coding protein_coding MGP_NODShiLtJ_T0040449.1 MGP_NODShiLtJ_G0021605.1 mouse_genomes_project 15 34875932 34897046 + MGP_NODShiLtJ_P0040449 Cmbl protein_coding protein_coding MGP_NODShiLtJ_T0040450.1 MGP_NODShiLtJ_G0021605.1 mouse_genomes_project 15 34879215 34892265 + MGP_NODShiLtJ_P0040450 Cmbl protein_coding protein_coding MGP_NODShiLtJ_T0040915.1 MGP_NODShiLtJ_G0021769.1 mouse_genomes_project 15 85181619 85183676 - MGP_NODShiLtJ_P0040915 Lypd2 protein_coding protein_coding MGP_NODShiLtJ_T0040916.1 MGP_NODShiLtJ_G0021769.1 mouse_genomes_project 15 85182179 85183664 - Lypd2 protein_coding retained_intron MGP_NODShiLtJ_T0098885.1 MGP_NODShiLtJ_G0037279.1 mouse_genomes_project 15 33798149 33798212 + Gm24487 snRNA snRNA MGP_NODShiLtJ_T0040475.1 MGP_NODShiLtJ_G0021615.1 mouse_genomes_project 15 37927515 38072837 + MGP_NODShiLtJ_P0040475 Matn2 protein_coding protein_coding MGP_NODShiLtJ_T0040476.1 MGP_NODShiLtJ_G0021615.1 mouse_genomes_project 15 37927516 38072841 + MGP_NODShiLtJ_P0040476 Matn2 protein_coding protein_coding MGP_NODShiLtJ_T0017325.1 MGP_NODShiLtJ_G0015169.1 mouse_genomes_project 15 84040438 84046746 + 1700010B13Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017326.1 MGP_NODShiLtJ_G0015169.1 mouse_genomes_project 15 84040460 84042189 + 1700010B13Rik processed_transcript retained_intron MGP_NODShiLtJ_T0041103.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87115754 87119825 - Sharpin protein_coding retained_intron MGP_NODShiLtJ_T0041104.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87115754 87119826 - MGP_NODShiLtJ_P0041104 Sharpin protein_coding protein_coding MGP_NODShiLtJ_T0041105.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87115755 87119762 - Sharpin protein_coding retained_intron MGP_NODShiLtJ_T0041106.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87115755 87119790 - Sharpin protein_coding retained_intron MGP_NODShiLtJ_T0041107.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87115768 87116399 - MGP_NODShiLtJ_P0041107 Sharpin protein_coding protein_coding MGP_NODShiLtJ_T0041108.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87115832 87116910 - Sharpin protein_coding retained_intron MGP_NODShiLtJ_T0041109.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87116343 87119465 - MGP_NODShiLtJ_P0041109 Sharpin protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041110.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87116563 87119406 - Sharpin protein_coding retained_intron MGP_NODShiLtJ_T0041111.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87116611 87119397 - Sharpin protein_coding retained_intron MGP_NODShiLtJ_T0041112.1 MGP_NODShiLtJ_G0021822.1 mouse_genomes_project 15 87117326 87119427 - Sharpin protein_coding retained_intron MGP_NODShiLtJ_T0101668.1 MGP_NODShiLtJ_G0039837.1 mouse_genomes_project 15 85972545 85978110 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0040550.1 MGP_NODShiLtJ_G0021639.1 mouse_genomes_project 15 41521082 41536112 + MGP_NODShiLtJ_P0040550 4930447A16Rik protein_coding protein_coding MGP_NODShiLtJ_T0040604.1 MGP_NODShiLtJ_G0021661.1 mouse_genomes_project 15 48053911 48095063 - MGP_NODShiLtJ_P0040604 Eif3e protein_coding protein_coding MGP_NODShiLtJ_T0041844.1 MGP_NODShiLtJ_G0022041.1 mouse_genomes_project 15 101024428 101036388 + Mov10l1 protein_coding retained_intron MGP_NODShiLtJ_T0041845.1 MGP_NODShiLtJ_G0022041.1 mouse_genomes_project 15 101024428 101088003 + MGP_NODShiLtJ_P0041845 Mov10l1 protein_coding protein_coding MGP_NODShiLtJ_T0041846.1 MGP_NODShiLtJ_G0022041.1 mouse_genomes_project 15 101024513 101088007 + MGP_NODShiLtJ_P0041846 Mov10l1 protein_coding protein_coding MGP_NODShiLtJ_T0041847.1 MGP_NODShiLtJ_G0022041.1 mouse_genomes_project 15 101062815 101066016 + Mov10l1 protein_coding processed_transcript MGP_NODShiLtJ_T0041848.1 MGP_NODShiLtJ_G0022041.1 mouse_genomes_project 15 101066007 101088003 + MGP_NODShiLtJ_P0041848 Mov10l1 protein_coding protein_coding MGP_NODShiLtJ_T0098925.1 MGP_NODShiLtJ_G0037319.1 mouse_genomes_project 15 112942797 112942904 - Gm25897 snRNA snRNA MGP_NODShiLtJ_T0006749.1 MGP_NODShiLtJ_G0005556.1 mouse_genomes_project 15 113822117 113823090 - C330013E15Rik lincRNA lincRNA MGP_NODShiLtJ_T0041958.1 MGP_NODShiLtJ_G0022068.1 mouse_genomes_project 15 101654375 101660635 + MGP_NODShiLtJ_P0041958 Acr protein_coding protein_coding MGP_NODShiLtJ_T0100146.1 MGP_NODShiLtJ_G0038540.1 mouse_genomes_project 15 3520464 3520596 - Gm23139 snoRNA snoRNA MGP_NODShiLtJ_T0041043.1 MGP_NODShiLtJ_G0021811.1 mouse_genomes_project 15 86794769 86800756 - MGP_NODShiLtJ_P0041043 protein_coding protein_coding MGP_NODShiLtJ_T0040405.1 MGP_NODShiLtJ_G0021586.1 mouse_genomes_project 15 27602504 27614134 - MGP_NODShiLtJ_P0040405 9230109A22Rik protein_coding protein_coding MGP_NODShiLtJ_T0017305.1 MGP_NODShiLtJ_G0015161.1 mouse_genomes_project 15 41516809 41528134 - Gm15941 processed_transcript processed_transcript MGP_NODShiLtJ_T0017306.1 MGP_NODShiLtJ_G0015161.1 mouse_genomes_project 15 41517788 41524345 - Gm15941 processed_transcript processed_transcript MGP_NODShiLtJ_T0017307.1 MGP_NODShiLtJ_G0015161.1 mouse_genomes_project 15 41517979 41527618 - Gm15941 processed_transcript processed_transcript MGP_NODShiLtJ_T0017308.1 MGP_NODShiLtJ_G0015161.1 mouse_genomes_project 15 41518095 41528132 - Gm15941 processed_transcript processed_transcript MGP_NODShiLtJ_T0017309.1 MGP_NODShiLtJ_G0015161.1 mouse_genomes_project 15 41518248 41528123 - Gm15941 processed_transcript processed_transcript MGP_NODShiLtJ_T0017310.1 MGP_NODShiLtJ_G0015161.1 mouse_genomes_project 15 41522872 41528884 - Gm15941 processed_transcript processed_transcript MGP_NODShiLtJ_T0042298.1 MGP_NODShiLtJ_G0022177.1 mouse_genomes_project 15 113492301 113505677 + MGP_NODShiLtJ_P0042298 Tmprss12 protein_coding protein_coding MGP_NODShiLtJ_T0041315.1 MGP_NODShiLtJ_G0021880.1 mouse_genomes_project 15 89697425 89746661 - MGP_NODShiLtJ_P0041315 Elfn2 protein_coding protein_coding MGP_NODShiLtJ_T0042063.1 MGP_NODShiLtJ_G0022104.1 mouse_genomes_project 15 110595092 110629088 - MGP_NODShiLtJ_P0042063 Rpap3 protein_coding protein_coding MGP_NODShiLtJ_T0098902.1 MGP_NODShiLtJ_G0037296.1 mouse_genomes_project 15 72573298 72573361 - Gm25702 snRNA snRNA MGP_NODShiLtJ_T0042348.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114105435 114188866 + MGP_NODShiLtJ_P0042348 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042349.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114105435 114188866 + MGP_NODShiLtJ_P0042349 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042350.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114106222 114288606 + MGP_NODShiLtJ_P0042350 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042351.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114106238 114188866 + MGP_NODShiLtJ_P0042351 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042352.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114106260 114325003 + MGP_NODShiLtJ_P0042352 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042353.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114107369 114325012 + MGP_NODShiLtJ_P0042353 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042354.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114107410 114320741 + MGP_NODShiLtJ_P0042354 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042355.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114107417 114320658 + MGP_NODShiLtJ_P0042355 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042356.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114107885 114188866 + MGP_NODShiLtJ_P0042356 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042357.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114185961 114197057 + MGP_NODShiLtJ_P0042357 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042358.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114188809 114325003 + MGP_NODShiLtJ_P0042358 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042359.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114188844 114196680 + MGP_NODShiLtJ_P0042359 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042360.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114188863 114319736 + MGP_NODShiLtJ_P0042360 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042361.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114217837 114224896 + MGP_NODShiLtJ_P0042361 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042362.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114220542 114223219 + Scn8a protein_coding retained_intron MGP_NODShiLtJ_T0042363.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114220577 114223066 + Scn8a protein_coding retained_intron MGP_NODShiLtJ_T0042364.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114220706 114279646 + MGP_NODShiLtJ_P0042364 Scn8a protein_coding protein_coding MGP_NODShiLtJ_T0042365.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114243341 114244983 + Scn8a protein_coding retained_intron MGP_NODShiLtJ_T0042366.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114244867 114250311 + Scn8a protein_coding retained_intron MGP_NODShiLtJ_T0042367.1 MGP_NODShiLtJ_G0022194.1 mouse_genomes_project 15 114293473 114307344 + Scn8a protein_coding processed_transcript MGP_NODShiLtJ_T0040689.1 MGP_NODShiLtJ_G0021696.1 mouse_genomes_project 15 65715771 65742689 - MGP_NODShiLtJ_P0040689 protein_coding protein_coding MGP_NODShiLtJ_T0040690.1 MGP_NODShiLtJ_G0021696.1 mouse_genomes_project 15 65715775 65967646 - MGP_NODShiLtJ_P0040690 protein_coding protein_coding MGP_NODShiLtJ_T0040536.1 MGP_NODShiLtJ_G0021637.1 mouse_genomes_project 15 41299230 41444189 + MGP_NODShiLtJ_P0040536 Grhl2 protein_coding protein_coding MGP_NODShiLtJ_T0040537.1 MGP_NODShiLtJ_G0021637.1 mouse_genomes_project 15 41299230 41412583 + MGP_NODShiLtJ_P0040537 Grhl2 protein_coding protein_coding MGP_NODShiLtJ_T0040538.1 MGP_NODShiLtJ_G0021637.1 mouse_genomes_project 15 41299252 41352391 + MGP_NODShiLtJ_P0040538 Grhl2 protein_coding protein_coding MGP_NODShiLtJ_T0040539.1 MGP_NODShiLtJ_G0021637.1 mouse_genomes_project 15 41393815 41444182 + Grhl2 protein_coding processed_transcript MGP_NODShiLtJ_T0040540.1 MGP_NODShiLtJ_G0021637.1 mouse_genomes_project 15 41414656 41441554 + MGP_NODShiLtJ_P0040540 Grhl2 protein_coding protein_coding MGP_NODShiLtJ_T0042465.1 MGP_NODShiLtJ_G0022243.1 mouse_genomes_project 15 115841696 115844825 + MGP_NODShiLtJ_P0042465 Sp1 protein_coding protein_coding MGP_NODShiLtJ_T0042466.1 MGP_NODShiLtJ_G0022243.1 mouse_genomes_project 15 115841881 115872652 + MGP_NODShiLtJ_P0042466 Sp1 protein_coding protein_coding MGP_NODShiLtJ_T0042467.1 MGP_NODShiLtJ_G0022243.1 mouse_genomes_project 15 115841886 115872652 + MGP_NODShiLtJ_P0042467 Sp1 protein_coding protein_coding MGP_NODShiLtJ_T0042468.1 MGP_NODShiLtJ_G0022243.1 mouse_genomes_project 15 115841933 115876377 + MGP_NODShiLtJ_P0042468 Sp1 protein_coding protein_coding MGP_NODShiLtJ_T0042469.1 MGP_NODShiLtJ_G0022243.1 mouse_genomes_project 15 115843857 115844825 + MGP_NODShiLtJ_P0042469 Sp1 protein_coding protein_coding MGP_NODShiLtJ_T0042470.1 MGP_NODShiLtJ_G0022243.1 mouse_genomes_project 15 115844176 115844975 + MGP_NODShiLtJ_P0042470 Sp1 protein_coding protein_coding MGP_NODShiLtJ_T0042471.1 MGP_NODShiLtJ_G0022243.1 mouse_genomes_project 15 115869216 115870137 + Sp1 protein_coding processed_transcript MGP_NODShiLtJ_T0040496.1 MGP_NODShiLtJ_G0021622.1 mouse_genomes_project 15 38529875 38534834 + MGP_NODShiLtJ_P0040496 Kcns2 protein_coding protein_coding MGP_NODShiLtJ_T0041359.1 MGP_NODShiLtJ_G0021894.1 mouse_genomes_project 15 90185913 90215179 + MGP_NODShiLtJ_P0041359 Micall1 protein_coding protein_coding MGP_NODShiLtJ_T0041488.1 MGP_NODShiLtJ_G0021923.1 mouse_genomes_project 15 91246235 91269514 + MGP_NODShiLtJ_P0041488 Syngr1 protein_coding protein_coding MGP_NODShiLtJ_T0041489.1 MGP_NODShiLtJ_G0021923.1 mouse_genomes_project 15 91246245 91275574 + MGP_NODShiLtJ_P0041489 Syngr1 protein_coding protein_coding MGP_NODShiLtJ_T0041490.1 MGP_NODShiLtJ_G0021923.1 mouse_genomes_project 15 91253920 91267735 + MGP_NODShiLtJ_P0041490 Syngr1 protein_coding protein_coding MGP_NODShiLtJ_T0041491.1 MGP_NODShiLtJ_G0021923.1 mouse_genomes_project 15 91271545 91272338 + MGP_NODShiLtJ_P0041491 Syngr1 protein_coding protein_coding MGP_NODShiLtJ_T0101288.1 MGP_NODShiLtJ_G0039558.1 mouse_genomes_project 15 111183715 111184669 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101289.1 MGP_NODShiLtJ_G0039558.1 mouse_genomes_project 15 111184032 111191286 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101290.1 MGP_NODShiLtJ_G0039558.1 mouse_genomes_project 15 111184126 111191286 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101291.1 MGP_NODShiLtJ_G0039558.1 mouse_genomes_project 15 111184259 111191511 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0000925.1 MGP_NODShiLtJ_G0000854.1 mouse_genomes_project 15 109536935 109537400 + TEC TEC MGP_NODShiLtJ_T0101657.1 MGP_NODShiLtJ_G0039826.1 mouse_genomes_project 15 48635547 48635750 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0041647.1 MGP_NODShiLtJ_G0021967.1 mouse_genomes_project 15 93589343 93598759 + MGP_NODShiLtJ_P0041647 1500009C09Rik protein_coding protein_coding MGP_NODShiLtJ_T0041648.1 MGP_NODShiLtJ_G0021967.1 mouse_genomes_project 15 93594072 93598774 + MGP_NODShiLtJ_P0041648 1500009C09Rik protein_coding protein_coding MGP_NODShiLtJ_T0040600.1 MGP_NODShiLtJ_G0021658.1 mouse_genomes_project 15 46458591 46463012 - MGP_NODShiLtJ_P0040600 Abra protein_coding protein_coding MGP_NODShiLtJ_T0040566.1 MGP_NODShiLtJ_G0021644.1 mouse_genomes_project 15 42661943 42699010 - MGP_NODShiLtJ_P0040566 Azin1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040567.1 MGP_NODShiLtJ_G0021644.1 mouse_genomes_project 15 42664062 42699150 - MGP_NODShiLtJ_P0040567 Azin1 protein_coding protein_coding MGP_NODShiLtJ_T0040568.1 MGP_NODShiLtJ_G0021644.1 mouse_genomes_project 15 42666376 42672930 - Azin1 protein_coding retained_intron MGP_NODShiLtJ_T0040569.1 MGP_NODShiLtJ_G0021644.1 mouse_genomes_project 15 42675548 42698003 - MGP_NODShiLtJ_P0040569 Azin1 protein_coding protein_coding MGP_NODShiLtJ_T0040570.1 MGP_NODShiLtJ_G0021644.1 mouse_genomes_project 15 42677297 42698062 - MGP_NODShiLtJ_P0040570 Azin1 protein_coding protein_coding MGP_NODShiLtJ_T0040571.1 MGP_NODShiLtJ_G0021644.1 mouse_genomes_project 15 42691295 42699091 - Azin1 protein_coding processed_transcript MGP_NODShiLtJ_T0041665.1 MGP_NODShiLtJ_G0021976.1 mouse_genomes_project 15 93830048 93853289 + MGP_NODShiLtJ_P0041665 protein_coding protein_coding MGP_NODShiLtJ_T0042243.1 MGP_NODShiLtJ_G0022159.1 mouse_genomes_project 15 112527861 112565759 - MGP_NODShiLtJ_P0042243 Nckap5l protein_coding protein_coding MGP_NODShiLtJ_T0042244.1 MGP_NODShiLtJ_G0022159.1 mouse_genomes_project 15 112529440 112530364 - MGP_NODShiLtJ_P0042244 Nckap5l protein_coding protein_coding MGP_NODShiLtJ_T0042245.1 MGP_NODShiLtJ_G0022159.1 mouse_genomes_project 15 112529839 112530360 - Nckap5l protein_coding processed_transcript MGP_NODShiLtJ_T0042246.1 MGP_NODShiLtJ_G0022159.1 mouse_genomes_project 15 112535167 112565723 - MGP_NODShiLtJ_P0042246 Nckap5l protein_coding protein_coding MGP_NODShiLtJ_T0006721.1 MGP_NODShiLtJ_G0005537.1 mouse_genomes_project 15 88885486 88890939 + Gm17638 lincRNA lincRNA MGP_NODShiLtJ_T0100184.1 MGP_NODShiLtJ_G0038578.1 mouse_genomes_project 15 96030903 96031047 - Gm22890 snoRNA snoRNA MGP_NODShiLtJ_T0040922.1 MGP_NODShiLtJ_G0021773.1 mouse_genomes_project 15 85217841 85225758 - MGP_NODShiLtJ_P0040922 D730001G18Rik protein_coding protein_coding MGP_NODShiLtJ_T0040923.1 MGP_NODShiLtJ_G0021773.1 mouse_genomes_project 15 85217842 85225793 - MGP_NODShiLtJ_P0040923 D730001G18Rik protein_coding protein_coding MGP_NODShiLtJ_T0012957.1 MGP_NODShiLtJ_G0011065.1 mouse_genomes_project 15 62176089 62177566 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100168.1 MGP_NODShiLtJ_G0038562.1 mouse_genomes_project 15 50241045 50241188 + Gm23343 snoRNA snoRNA MGP_NODShiLtJ_T0040489.1 MGP_NODShiLtJ_G0021620.1 mouse_genomes_project 15 38133496 38167994 + MGP_NODShiLtJ_P0040489 Pop1 protein_coding protein_coding MGP_NODShiLtJ_T0040490.1 MGP_NODShiLtJ_G0021620.1 mouse_genomes_project 15 38133515 38167983 + MGP_NODShiLtJ_P0040490 Pop1 protein_coding protein_coding MGP_NODShiLtJ_T0040491.1 MGP_NODShiLtJ_G0021620.1 mouse_genomes_project 15 38147713 38149996 + Pop1 protein_coding retained_intron MGP_NODShiLtJ_T0040492.1 MGP_NODShiLtJ_G0021620.1 mouse_genomes_project 15 38151965 38156667 + Pop1 protein_coding processed_transcript MGP_NODShiLtJ_T0040493.1 MGP_NODShiLtJ_G0021620.1 mouse_genomes_project 15 38154438 38166507 + Pop1 protein_coding retained_intron MGP_NODShiLtJ_T0040494.1 MGP_NODShiLtJ_G0021620.1 mouse_genomes_project 15 38163539 38166577 + Pop1 protein_coding retained_intron MGP_NODShiLtJ_T0042287.1 MGP_NODShiLtJ_G0022175.1 mouse_genomes_project 15 113227210 113427823 + MGP_NODShiLtJ_P0042287 Dip2b protein_coding protein_coding MGP_NODShiLtJ_T0042288.1 MGP_NODShiLtJ_G0022175.1 mouse_genomes_project 15 113358030 113424018 + MGP_NODShiLtJ_P0042288 Dip2b protein_coding protein_coding MGP_NODShiLtJ_T0042289.1 MGP_NODShiLtJ_G0022175.1 mouse_genomes_project 15 113358030 113427823 + MGP_NODShiLtJ_P0042289 Dip2b protein_coding protein_coding MGP_NODShiLtJ_T0042290.1 MGP_NODShiLtJ_G0022175.1 mouse_genomes_project 15 113411078 113413572 + Dip2b protein_coding processed_transcript MGP_NODShiLtJ_T0041972.1 MGP_NODShiLtJ_G0022072.1 mouse_genomes_project 15 102716969 102915051 - MGP_NODShiLtJ_P0041972 Cpne8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041973.1 MGP_NODShiLtJ_G0022072.1 mouse_genomes_project 15 102716970 102915112 - MGP_NODShiLtJ_P0041973 Cpne8 protein_coding protein_coding MGP_NODShiLtJ_T0041974.1 MGP_NODShiLtJ_G0022072.1 mouse_genomes_project 15 102883294 102915056 - Cpne8 protein_coding retained_intron MGP_NODShiLtJ_T0041238.1 MGP_NODShiLtJ_G0021854.1 mouse_genomes_project 15 87806360 87808589 + MGP_NODShiLtJ_P0041238 1110038F14Rik protein_coding protein_coding MGP_NODShiLtJ_T0042138.1 MGP_NODShiLtJ_G0022122.1 mouse_genomes_project 15 111345135 111346237 - MGP_NODShiLtJ_P0042138 Olfr283 protein_coding protein_coding MGP_NODShiLtJ_T0040274.1 MGP_NODShiLtJ_G0021548.1 mouse_genomes_project 15 6678721 6744471 + MGP_NODShiLtJ_P0040274 Ranbp3l protein_coding protein_coding MGP_NODShiLtJ_T0040275.1 MGP_NODShiLtJ_G0021548.1 mouse_genomes_project 15 6678721 6713791 + MGP_NODShiLtJ_P0040275 Ranbp3l protein_coding protein_coding MGP_NODShiLtJ_T0040276.1 MGP_NODShiLtJ_G0021548.1 mouse_genomes_project 15 6678721 6742509 + MGP_NODShiLtJ_P0040276 Ranbp3l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040431.1 MGP_NODShiLtJ_G0021596.1 mouse_genomes_project 15 30318435 30344927 - MGP_NODShiLtJ_P0040431 Fam105a protein_coding protein_coding MGP_NODShiLtJ_T0040432.1 MGP_NODShiLtJ_G0021596.1 mouse_genomes_project 15 30320262 30344836 - MGP_NODShiLtJ_P0040432 Fam105a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0009982.1 MGP_NODShiLtJ_G0008115.1 mouse_genomes_project 15 94316039 94316099 - Gm27618 miRNA miRNA MGP_NODShiLtJ_T0042186.1 MGP_NODShiLtJ_G0022141.1 mouse_genomes_project 15 111856936 111876785 - MGP_NODShiLtJ_P0042186 Prkag1 protein_coding protein_coding MGP_NODShiLtJ_T0040913.1 MGP_NODShiLtJ_G0021768.1 mouse_genomes_project 15 85172235 85175948 - MGP_NODShiLtJ_P0040913 Slurp1 protein_coding protein_coding MGP_NODShiLtJ_T0040914.1 MGP_NODShiLtJ_G0021768.1 mouse_genomes_project 15 85174581 85175928 - MGP_NODShiLtJ_P0040914 Slurp1 protein_coding protein_coding MGP_NODShiLtJ_T0098890.1 MGP_NODShiLtJ_G0037284.1 mouse_genomes_project 15 49650897 49651004 + Gm22392 snRNA snRNA MGP_NODShiLtJ_T0042315.1 MGP_NODShiLtJ_G0022184.1 mouse_genomes_project 15 113644238 113654512 + MGP_NODShiLtJ_P0042315 Letmd1 protein_coding protein_coding MGP_NODShiLtJ_T0006736.1 MGP_NODShiLtJ_G0005548.1 mouse_genomes_project 15 103913541 103920991 + 4933438A12Rik lincRNA lincRNA MGP_NODShiLtJ_T0006726.1 MGP_NODShiLtJ_G0005542.1 mouse_genomes_project 15 94535784 94540888 - Gm29019 lincRNA lincRNA MGP_NODShiLtJ_T0006727.1 MGP_NODShiLtJ_G0005542.1 mouse_genomes_project 15 94535842 94540769 - Gm29019 lincRNA lincRNA MGP_NODShiLtJ_T0042406.1 MGP_NODShiLtJ_G0022217.1 mouse_genomes_project 15 115148925 115159465 - MGP_NODShiLtJ_P0042406 Krt72 protein_coding protein_coding MGP_NODShiLtJ_T0042407.1 MGP_NODShiLtJ_G0022217.1 mouse_genomes_project 15 115149086 115151447 - Krt72 protein_coding processed_transcript MGP_NODShiLtJ_T0042416.1 MGP_NODShiLtJ_G0022226.1 mouse_genomes_project 15 115383471 115395564 - MGP_NODShiLtJ_P0042416 Krt8 protein_coding protein_coding MGP_NODShiLtJ_T0042203.1 MGP_NODShiLtJ_G0022147.1 mouse_genomes_project 15 112071056 112071371 + MGP_NODShiLtJ_P0042203 Gm8973 protein_coding protein_coding MGP_NODShiLtJ_T0003586.1 MGP_NODShiLtJ_G0003244.1 mouse_genomes_project 15 113913176 113923567 + Galnt6os antisense antisense MGP_NODShiLtJ_T0041325.1 MGP_NODShiLtJ_G0021885.1 mouse_genomes_project 15 89934203 89952059 + MGP_NODShiLtJ_P0041325 Gga1 protein_coding protein_coding MGP_NODShiLtJ_T0006719.1 MGP_NODShiLtJ_G0005535.1 mouse_genomes_project 15 85607124 85610000 - Gm28502 lincRNA lincRNA MGP_NODShiLtJ_T0040461.1 MGP_NODShiLtJ_G0021610.1 mouse_genomes_project 15 36446528 36466285 + MGP_NODShiLtJ_P0040461 Sdc2 protein_coding protein_coding MGP_NODShiLtJ_T0041282.1 MGP_NODShiLtJ_G0021868.1 mouse_genomes_project 15 89135889 89149869 - MGP_NODShiLtJ_P0041282 Pvalb protein_coding protein_coding MGP_NODShiLtJ_T0041283.1 MGP_NODShiLtJ_G0021868.1 mouse_genomes_project 15 89135892 89152032 - MGP_NODShiLtJ_P0041283 Pvalb protein_coding protein_coding MGP_NODShiLtJ_T0041971.1 MGP_NODShiLtJ_G0022071.1 mouse_genomes_project 15 102409588 102415759 + MGP_NODShiLtJ_P0041971 Alg10b protein_coding protein_coding MGP_NODShiLtJ_T0040329.1 MGP_NODShiLtJ_G0021562.1 mouse_genomes_project 15 8376688 8384350 + MGP_NODShiLtJ_P0040329 Rad1 protein_coding protein_coding MGP_NODShiLtJ_T0040330.1 MGP_NODShiLtJ_G0021562.1 mouse_genomes_project 15 8376719 8384345 + Rad1 protein_coding retained_intron MGP_NODShiLtJ_T0040331.1 MGP_NODShiLtJ_G0021562.1 mouse_genomes_project 15 8376739 8389561 + MGP_NODShiLtJ_P0040331 Rad1 protein_coding protein_coding MGP_NODShiLtJ_T0040332.1 MGP_NODShiLtJ_G0021562.1 mouse_genomes_project 15 8376750 8381018 + MGP_NODShiLtJ_P0040332 Rad1 protein_coding protein_coding MGP_NODShiLtJ_T0040333.1 MGP_NODShiLtJ_G0021562.1 mouse_genomes_project 15 8377145 8384024 + MGP_NODShiLtJ_P0040333 Rad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040334.1 MGP_NODShiLtJ_G0021562.1 mouse_genomes_project 15 8377279 8384335 + MGP_NODShiLtJ_P0040334 Rad1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042214.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112396191 112407054 + MGP_NODShiLtJ_P0042214 Prpf40b protein_coding protein_coding MGP_NODShiLtJ_T0042215.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112396343 112418107 + Prpf40b protein_coding retained_intron MGP_NODShiLtJ_T0042216.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112396345 112417203 + Prpf40b protein_coding retained_intron MGP_NODShiLtJ_T0042217.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112396345 112417203 + Prpf40b protein_coding retained_intron MGP_NODShiLtJ_T0042218.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112396348 112408166 + MGP_NODShiLtJ_P0042218 Prpf40b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042219.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112396375 112418107 + MGP_NODShiLtJ_P0042219 Prpf40b protein_coding protein_coding MGP_NODShiLtJ_T0042220.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112396999 112418099 + MGP_NODShiLtJ_P0042220 Prpf40b protein_coding protein_coding MGP_NODShiLtJ_T0042221.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112404387 112417588 + MGP_NODShiLtJ_P0042221 Prpf40b protein_coding protein_coding MGP_NODShiLtJ_T0042222.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112404388 112418096 + MGP_NODShiLtJ_P0042222 Prpf40b protein_coding protein_coding MGP_NODShiLtJ_T0042223.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112408973 112416182 + Prpf40b protein_coding retained_intron MGP_NODShiLtJ_T0042224.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112410991 112416979 + Prpf40b protein_coding retained_intron MGP_NODShiLtJ_T0042225.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112415956 112416883 + Prpf40b protein_coding retained_intron MGP_NODShiLtJ_T0042226.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112415965 112417760 + MGP_NODShiLtJ_P0042226 Prpf40b protein_coding protein_coding MGP_NODShiLtJ_T0042227.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112415994 112417902 + MGP_NODShiLtJ_P0042227 Prpf40b protein_coding protein_coding MGP_NODShiLtJ_T0042228.1 MGP_NODShiLtJ_G0022156.1 mouse_genomes_project 15 112416628 112418099 + MGP_NODShiLtJ_P0042228 Prpf40b protein_coding protein_coding MGP_NODShiLtJ_T0041653.1 MGP_NODShiLtJ_G0021971.1 mouse_genomes_project 15 93685512 93689854 + Fam109b protein_coding processed_transcript MGP_NODShiLtJ_T0041655.1 MGP_NODShiLtJ_G0021971.1 mouse_genomes_project 15 93687119 93689868 + Fam109b protein_coding processed_transcript MGP_NODShiLtJ_T0041656.1 MGP_NODShiLtJ_G0021971.1 mouse_genomes_project 15 93687424 93692319 + MGP_NODShiLtJ_P0041656 Fam109b protein_coding protein_coding MGP_NODShiLtJ_T0041658.1 MGP_NODShiLtJ_G0021971.1 mouse_genomes_project 15 93687745 93692307 + MGP_NODShiLtJ_P0041658 Fam109b protein_coding protein_coding MGP_NODShiLtJ_T0098879.1 MGP_NODShiLtJ_G0037273.1 mouse_genomes_project 15 2164854 2164957 + Gm25652 snRNA snRNA MGP_NODShiLtJ_T0101665.1 MGP_NODShiLtJ_G0039834.1 mouse_genomes_project 15 85918973 85919202 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0040368.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10468201 10708726 - MGP_NODShiLtJ_P0040368 Pdzd2 protein_coding protein_coding MGP_NODShiLtJ_T0040369.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10510138 10512897 - Pdzd2 protein_coding retained_intron MGP_NODShiLtJ_T0040370.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10516555 10524601 - Pdzd2 protein_coding retained_intron MGP_NODShiLtJ_T0040371.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10518906 10660570 - MGP_NODShiLtJ_P0040371 Pdzd2 protein_coding protein_coding MGP_NODShiLtJ_T0040372.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10570670 10608467 - MGP_NODShiLtJ_P0040372 Pdzd2 protein_coding protein_coding MGP_NODShiLtJ_T0040373.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10570710 10661167 - MGP_NODShiLtJ_P0040373 Pdzd2 protein_coding protein_coding MGP_NODShiLtJ_T0040374.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10638169 10661075 - Pdzd2 protein_coding processed_transcript MGP_NODShiLtJ_T0040375.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10656298 10660573 - Pdzd2 protein_coding retained_intron MGP_NODShiLtJ_T0040376.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10660354 10661522 - Pdzd2 protein_coding retained_intron MGP_NODShiLtJ_T0040377.1 MGP_NODShiLtJ_G0021577.1 mouse_genomes_project 15 10704684 10718016 - Pdzd2 protein_coding processed_transcript MGP_NODShiLtJ_T0040984.1 MGP_NODShiLtJ_G0021792.1 mouse_genomes_project 15 86318362 86340117 - MGP_NODShiLtJ_P0040984 Top1mt protein_coding protein_coding MGP_NODShiLtJ_T0041642.1 MGP_NODShiLtJ_G0021963.1 mouse_genomes_project 15 93474219 93536166 + MGP_NODShiLtJ_P0041642 Srebf2 protein_coding protein_coding MGP_NODShiLtJ_T0006742.1 MGP_NODShiLtJ_G0005552.1 mouse_genomes_project 15 109020940 109043244 - 4833422M21Rik lincRNA lincRNA MGP_NODShiLtJ_T0006743.1 MGP_NODShiLtJ_G0005552.1 mouse_genomes_project 15 109020940 109027592 - 4833422M21Rik lincRNA lincRNA MGP_NODShiLtJ_T0006744.1 MGP_NODShiLtJ_G0005552.1 mouse_genomes_project 15 109037512 109043176 - 4833422M21Rik lincRNA lincRNA MGP_NODShiLtJ_T0040529.1 MGP_NODShiLtJ_G0021634.1 mouse_genomes_project 15 40788950 40814103 - MGP_NODShiLtJ_P0040529 Ywhaz protein_coding protein_coding MGP_NODShiLtJ_T0040530.1 MGP_NODShiLtJ_G0021634.1 mouse_genomes_project 15 40794446 40813851 - Ywhaz protein_coding retained_intron MGP_NODShiLtJ_T0040531.1 MGP_NODShiLtJ_G0021634.1 mouse_genomes_project 15 40811043 40812746 - MGP_NODShiLtJ_P0040531 Ywhaz protein_coding protein_coding MGP_NODShiLtJ_T0040532.1 MGP_NODShiLtJ_G0021634.1 mouse_genomes_project 15 40811175 40813542 - MGP_NODShiLtJ_P0040532 Ywhaz protein_coding protein_coding MGP_NODShiLtJ_T0040533.1 MGP_NODShiLtJ_G0021634.1 mouse_genomes_project 15 40811230 40814879 - MGP_NODShiLtJ_P0040533 Ywhaz protein_coding protein_coding MGP_NODShiLtJ_T0040620.1 MGP_NODShiLtJ_G0021671.1 mouse_genomes_project 15 53907808 54593836 - MGP_NODShiLtJ_P0040620 Csmd3 protein_coding protein_coding MGP_NODShiLtJ_T0040621.1 MGP_NODShiLtJ_G0021671.1 mouse_genomes_project 15 53907811 53957554 - Csmd3 protein_coding retained_intron MGP_NODShiLtJ_T0040622.1 MGP_NODShiLtJ_G0021671.1 mouse_genomes_project 15 53908536 55734403 - MGP_NODShiLtJ_P0040622 Csmd3 protein_coding protein_coding MGP_NODShiLtJ_T0040623.1 MGP_NODShiLtJ_G0021671.1 mouse_genomes_project 15 53974613 53980286 - Csmd3 protein_coding retained_intron MGP_NODShiLtJ_T0040624.1 MGP_NODShiLtJ_G0021671.1 mouse_genomes_project 15 54507995 54523214 - Csmd3 protein_coding retained_intron MGP_NODShiLtJ_T0041035.1 MGP_NODShiLtJ_G0021809.1 mouse_genomes_project 15 86756421 86779046 - MGP_NODShiLtJ_P0041035 Scrib protein_coding protein_coding MGP_NODShiLtJ_T0041036.1 MGP_NODShiLtJ_G0021809.1 mouse_genomes_project 15 86756421 86771981 - MGP_NODShiLtJ_P0041036 Scrib protein_coding protein_coding MGP_NODShiLtJ_T0041037.1 MGP_NODShiLtJ_G0021809.1 mouse_genomes_project 15 86756421 86779016 - MGP_NODShiLtJ_P0041037 Scrib protein_coding protein_coding MGP_NODShiLtJ_T0041038.1 MGP_NODShiLtJ_G0021809.1 mouse_genomes_project 15 86756421 86779016 - MGP_NODShiLtJ_P0041038 Scrib protein_coding protein_coding MGP_NODShiLtJ_T0041039.1 MGP_NODShiLtJ_G0021809.1 mouse_genomes_project 15 86758203 86760050 - MGP_NODShiLtJ_P0041039 Scrib protein_coding protein_coding MGP_NODShiLtJ_T0041040.1 MGP_NODShiLtJ_G0021809.1 mouse_genomes_project 15 86758466 86760050 - MGP_NODShiLtJ_P0041040 Scrib protein_coding protein_coding MGP_NODShiLtJ_T0098928.1 MGP_NODShiLtJ_G0037322.1 mouse_genomes_project 15 115897799 115897898 + Gm24128 snRNA snRNA MGP_NODShiLtJ_T0040446.1 MGP_NODShiLtJ_G0021603.1 mouse_genomes_project 15 34716588 34732025 - MGP_NODShiLtJ_P0040446 Ropn1l protein_coding protein_coding MGP_NODShiLtJ_T0009955.1 MGP_NODShiLtJ_G0008088.1 mouse_genomes_project 15 61726835 61726910 - Mir28c miRNA miRNA MGP_NODShiLtJ_T0098900.1 MGP_NODShiLtJ_G0037294.1 mouse_genomes_project 15 67425405 67425561 - Gm24041 snRNA snRNA MGP_NODShiLtJ_T0003567.1 MGP_NODShiLtJ_G0003229.1 mouse_genomes_project 15 98043845 98045268 + Gm15569 antisense antisense MGP_NODShiLtJ_T0009986.1 MGP_NODShiLtJ_G0008119.1 mouse_genomes_project 15 96699457 96699555 - Mir1249 miRNA miRNA MGP_NODShiLtJ_T0042386.1 MGP_NODShiLtJ_G0022203.1 mouse_genomes_project 15 114723133 114724074 + Krt7 protein_coding processed_transcript MGP_NODShiLtJ_T0042387.1 MGP_NODShiLtJ_G0022203.1 mouse_genomes_project 15 114723142 114724486 + Krt7 protein_coding processed_transcript MGP_NODShiLtJ_T0042388.1 MGP_NODShiLtJ_G0022203.1 mouse_genomes_project 15 114723142 114742869 + Krt7 protein_coding processed_transcript MGP_NODShiLtJ_T0042389.1 MGP_NODShiLtJ_G0022203.1 mouse_genomes_project 15 114723193 114733124 + MGP_NODShiLtJ_P0042389 Krt7 protein_coding protein_coding MGP_NODShiLtJ_T0042390.1 MGP_NODShiLtJ_G0022203.1 mouse_genomes_project 15 114724492 114745571 + MGP_NODShiLtJ_P0042390 Krt7 protein_coding protein_coding MGP_NODShiLtJ_T0042391.1 MGP_NODShiLtJ_G0022203.1 mouse_genomes_project 15 114724539 114743047 + Krt7 protein_coding retained_intron MGP_NODShiLtJ_T0041558.1 MGP_NODShiLtJ_G0021943.1 mouse_genomes_project 15 92721827 92732739 + MGP_NODShiLtJ_P0041558 Rbx1 protein_coding protein_coding MGP_NODShiLtJ_T0042509.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 115977312 116080550 - MGP_NODShiLtJ_P0042509 protein_coding protein_coding MGP_NODShiLtJ_T0042510.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 115981078 115981468 - MGP_NODShiLtJ_P0042510 protein_coding protein_coding MGP_NODShiLtJ_T0042511.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 115981078 116080927 - MGP_NODShiLtJ_P0042511 protein_coding protein_coding MGP_NODShiLtJ_T0042512.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 115985745 116080916 - MGP_NODShiLtJ_P0042512 protein_coding protein_coding MGP_NODShiLtJ_T0042513.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 115988816 116080930 - MGP_NODShiLtJ_P0042513 protein_coding protein_coding MGP_NODShiLtJ_T0042514.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 115989496 116080565 - MGP_NODShiLtJ_P0042514 protein_coding protein_coding MGP_NODShiLtJ_T0042515.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 115997891 116080915 - protein_coding retained_intron MGP_NODShiLtJ_T0042516.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 116000730 116080941 - MGP_NODShiLtJ_P0042516 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042517.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 116000782 116080399 - MGP_NODShiLtJ_P0042517 protein_coding protein_coding MGP_NODShiLtJ_T0042518.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 116004292 116080544 - MGP_NODShiLtJ_P0042518 protein_coding protein_coding MGP_NODShiLtJ_T0042519.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 116004292 116080923 - MGP_NODShiLtJ_P0042519 protein_coding protein_coding MGP_NODShiLtJ_T0042520.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 116018015 116080547 - protein_coding retained_intron MGP_NODShiLtJ_T0042521.1 MGP_NODShiLtJ_G0022252.1 mouse_genomes_project 15 116049816 116080941 - protein_coding retained_intron MGP_NODShiLtJ_T0041509.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165493 92187908 + MGP_NODShiLtJ_P0041509 Adsl protein_coding protein_coding MGP_NODShiLtJ_T0041510.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165494 92185968 + MGP_NODShiLtJ_P0041510 Adsl protein_coding protein_coding MGP_NODShiLtJ_T0041511.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165507 92167116 + Adsl protein_coding retained_intron MGP_NODShiLtJ_T0041512.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165515 92186079 + MGP_NODShiLtJ_P0041512 Adsl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041513.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165522 92185708 + MGP_NODShiLtJ_P0041513 Adsl protein_coding protein_coding MGP_NODShiLtJ_T0041514.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165522 92181449 + MGP_NODShiLtJ_P0041514 Adsl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041515.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165540 92183083 + MGP_NODShiLtJ_P0041515 Adsl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041516.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165545 92173184 + Adsl protein_coding retained_intron MGP_NODShiLtJ_T0041517.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92165780 92169583 + MGP_NODShiLtJ_P0041517 Adsl protein_coding protein_coding MGP_NODShiLtJ_T0041518.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92178692 92181324 + Adsl protein_coding retained_intron MGP_NODShiLtJ_T0041519.1 MGP_NODShiLtJ_G0021934.1 mouse_genomes_project 15 92181402 92185715 + MGP_NODShiLtJ_P0041519 Adsl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041233.1 MGP_NODShiLtJ_G0021850.1 mouse_genomes_project 15 87718929 87736260 + MGP_NODShiLtJ_P0041233 Zfp7 protein_coding protein_coding MGP_NODShiLtJ_T0101068.1 MGP_NODShiLtJ_G0039428.1 mouse_genomes_project 15 116091844 116092199 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0042417.1 MGP_NODShiLtJ_G0022227.1 mouse_genomes_project 15 115424327 115429408 + MGP_NODShiLtJ_P0042417 Krt18 protein_coding protein_coding MGP_NODShiLtJ_T0041279.1 MGP_NODShiLtJ_G0021865.1 mouse_genomes_project 15 88882810 88894637 - MGP_NODShiLtJ_P0041279 Eif3d protein_coding protein_coding MGP_NODShiLtJ_T0041993.1 MGP_NODShiLtJ_G0022078.1 mouse_genomes_project 15 104190204 104236333 + MGP_NODShiLtJ_P0041993 Smgc protein_coding protein_coding MGP_NODShiLtJ_T0041994.1 MGP_NODShiLtJ_G0022078.1 mouse_genomes_project 15 104190267 104236702 + MGP_NODShiLtJ_P0041994 Smgc protein_coding protein_coding MGP_NODShiLtJ_T0041995.1 MGP_NODShiLtJ_G0022078.1 mouse_genomes_project 15 104190267 104236703 + MGP_NODShiLtJ_P0041995 Smgc protein_coding protein_coding MGP_NODShiLtJ_T0041996.1 MGP_NODShiLtJ_G0022078.1 mouse_genomes_project 15 104190267 104236703 + MGP_NODShiLtJ_P0041996 Smgc protein_coding protein_coding MGP_NODShiLtJ_T0041997.1 MGP_NODShiLtJ_G0022078.1 mouse_genomes_project 15 104190275 104212240 + MGP_NODShiLtJ_P0041997 Smgc protein_coding protein_coding MGP_NODShiLtJ_T0041998.1 MGP_NODShiLtJ_G0022078.1 mouse_genomes_project 15 104193365 104236704 + MGP_NODShiLtJ_P0041998 Smgc protein_coding protein_coding MGP_NODShiLtJ_T0041999.1 MGP_NODShiLtJ_G0022078.1 mouse_genomes_project 15 104205060 104236706 + MGP_NODShiLtJ_P0041999 Smgc protein_coding protein_coding MGP_NODShiLtJ_T0042000.1 MGP_NODShiLtJ_G0022078.1 mouse_genomes_project 15 104212154 104236706 + MGP_NODShiLtJ_P0042000 Smgc protein_coding protein_coding MGP_NODShiLtJ_T0040562.1 MGP_NODShiLtJ_G0021641.1 mouse_genomes_project 15 42107602 42224579 - MGP_NODShiLtJ_P0040562 Ubr5 protein_coding protein_coding MGP_NODShiLtJ_T0040563.1 MGP_NODShiLtJ_G0021641.1 mouse_genomes_project 15 42108568 42224144 - MGP_NODShiLtJ_P0040563 Ubr5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0006681.1 MGP_NODShiLtJ_G0005513.1 mouse_genomes_project 15 10037672 10042869 + 1700047G03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006682.1 MGP_NODShiLtJ_G0005513.1 mouse_genomes_project 15 10037733 10043478 + 1700047G03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006683.1 MGP_NODShiLtJ_G0005513.1 mouse_genomes_project 15 10037820 10042900 + 1700047G03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006684.1 MGP_NODShiLtJ_G0005513.1 mouse_genomes_project 15 10040455 10043463 + 1700047G03Rik lincRNA lincRNA MGP_NODShiLtJ_T0009992.1 MGP_NODShiLtJ_G0008125.1 mouse_genomes_project 15 101230330 101230403 - Mir6958 miRNA miRNA MGP_NODShiLtJ_T0010003.1 MGP_NODShiLtJ_G0008136.1 mouse_genomes_project 15 115084124 115084253 + Gm44323 miRNA miRNA MGP_NODShiLtJ_T0041147.1 MGP_NODShiLtJ_G0021828.1 mouse_genomes_project 15 87233068 87257424 - MGP_NODShiLtJ_P0041147 Bop1 protein_coding protein_coding MGP_NODShiLtJ_T0040513.1 MGP_NODShiLtJ_G0021628.1 mouse_genomes_project 15 40107261 40125414 - MGP_NODShiLtJ_P0040513 Fbxo43 protein_coding protein_coding MGP_NODShiLtJ_T0041579.1 MGP_NODShiLtJ_G0021947.1 mouse_genomes_project 15 92960576 92976585 - MGP_NODShiLtJ_P0041579 Chadl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041582.1 MGP_NODShiLtJ_G0021947.1 mouse_genomes_project 15 92968436 92979844 - MGP_NODShiLtJ_P0041582 Chadl protein_coding protein_coding MGP_NODShiLtJ_T0041583.1 MGP_NODShiLtJ_G0021947.1 mouse_genomes_project 15 92968452 92976764 - MGP_NODShiLtJ_P0041583 Chadl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040694.1 MGP_NODShiLtJ_G0021699.1 mouse_genomes_project 15 66432513 66492346 + MGP_NODShiLtJ_P0040694 Tbc1d31 protein_coding protein_coding MGP_NODShiLtJ_T0040695.1 MGP_NODShiLtJ_G0021699.1 mouse_genomes_project 15 66432548 66481687 + Tbc1d31 protein_coding processed_transcript MGP_NODShiLtJ_T0040696.1 MGP_NODShiLtJ_G0021699.1 mouse_genomes_project 15 66432553 66440260 + MGP_NODShiLtJ_P0040696 Tbc1d31 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040697.1 MGP_NODShiLtJ_G0021699.1 mouse_genomes_project 15 66433319 66481767 + Tbc1d31 protein_coding retained_intron MGP_NODShiLtJ_T0040698.1 MGP_NODShiLtJ_G0021699.1 mouse_genomes_project 15 66434169 66476323 + Tbc1d31 protein_coding retained_intron MGP_NODShiLtJ_T0040699.1 MGP_NODShiLtJ_G0021699.1 mouse_genomes_project 15 66436327 66477636 + Tbc1d31 protein_coding retained_intron MGP_NODShiLtJ_T0040700.1 MGP_NODShiLtJ_G0021699.1 mouse_genomes_project 15 66480697 66492352 + MGP_NODShiLtJ_P0040700 Tbc1d31 protein_coding protein_coding MGP_NODShiLtJ_T0100156.1 MGP_NODShiLtJ_G0038550.1 mouse_genomes_project 15 33186139 33186317 - Gm26163 snoRNA snoRNA MGP_NODShiLtJ_T0042486.1 MGP_NODShiLtJ_G0022248.1 mouse_genomes_project 15 115955080 115955245 + MGP_NODShiLtJ_P0042486 Gm10337 protein_coding protein_coding MGP_NODShiLtJ_T0040732.1 MGP_NODShiLtJ_G0021715.1 mouse_genomes_project 15 67498436 67542550 - MGP_NODShiLtJ_P0040732 Tatdn1 protein_coding protein_coding MGP_NODShiLtJ_T0000917.1 MGP_NODShiLtJ_G0000846.1 mouse_genomes_project 15 27693031 27693546 - TEC TEC MGP_NODShiLtJ_T0009952.1 MGP_NODShiLtJ_G0008085.1 mouse_genomes_project 15 44509081 44509152 - Gm25958 miRNA miRNA MGP_NODShiLtJ_T0041959.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101668582 101677967 - MGP_NODShiLtJ_P0041959 Rabl2 protein_coding protein_coding MGP_NODShiLtJ_T0041960.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101668586 101677909 - Rabl2 protein_coding retained_intron MGP_NODShiLtJ_T0041961.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101668586 101677908 - MGP_NODShiLtJ_P0041961 Rabl2 protein_coding protein_coding MGP_NODShiLtJ_T0041962.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101669090 101676443 - MGP_NODShiLtJ_P0041962 Rabl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041963.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101669362 101670592 - Rabl2 protein_coding retained_intron MGP_NODShiLtJ_T0041964.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101669404 101677934 - MGP_NODShiLtJ_P0041964 Rabl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041965.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101669432 101677883 - MGP_NODShiLtJ_P0041965 Rabl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041966.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101669447 101670367 - MGP_NODShiLtJ_P0041966 Rabl2 protein_coding protein_coding MGP_NODShiLtJ_T0041967.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101669693 101677930 - MGP_NODShiLtJ_P0041967 Rabl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041968.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101672275 101677949 - Rabl2 protein_coding retained_intron MGP_NODShiLtJ_T0041969.1 MGP_NODShiLtJ_G0022069.1 mouse_genomes_project 15 101673936 101677920 - Rabl2 protein_coding processed_transcript MGP_NODShiLtJ_T0040849.1 MGP_NODShiLtJ_G0021749.1 mouse_genomes_project 15 81684524 81971865 - MGP_NODShiLtJ_P0040849 Fam135b protein_coding protein_coding MGP_NODShiLtJ_T0040693.1 MGP_NODShiLtJ_G0021698.1 mouse_genomes_project 15 66391047 66411599 - MGP_NODShiLtJ_P0040693 Derl1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042464.1 MGP_NODShiLtJ_G0022242.1 mouse_genomes_project 15 115785668 115796811 - MGP_NODShiLtJ_P0042464 Sp7 protein_coding protein_coding MGP_NODShiLtJ_T0042247.1 MGP_NODShiLtJ_G0022160.1 mouse_genomes_project 15 112580816 112585464 - MGP_NODShiLtJ_P0042247 Bcdin3d protein_coding protein_coding MGP_NODShiLtJ_T0040990.1 MGP_NODShiLtJ_G0021794.1 mouse_genomes_project 15 86420264 86421344 - MGP_NODShiLtJ_P0040990 Mafa protein_coding protein_coding MGP_NODShiLtJ_T0042020.1 MGP_NODShiLtJ_G0022084.1 mouse_genomes_project 15 105946487 106044696 + MGP_NODShiLtJ_P0042020 Pphln1 protein_coding protein_coding MGP_NODShiLtJ_T0042021.1 MGP_NODShiLtJ_G0022084.1 mouse_genomes_project 15 105946487 106044696 + MGP_NODShiLtJ_P0042021 Pphln1 protein_coding protein_coding MGP_NODShiLtJ_T0042022.1 MGP_NODShiLtJ_G0022084.1 mouse_genomes_project 15 105946487 106044696 + MGP_NODShiLtJ_P0042022 Pphln1 protein_coding protein_coding MGP_NODShiLtJ_T0042023.1 MGP_NODShiLtJ_G0022084.1 mouse_genomes_project 15 105946601 106044282 + MGP_NODShiLtJ_P0042023 Pphln1 protein_coding protein_coding MGP_NODShiLtJ_T0040730.1 MGP_NODShiLtJ_G0021713.1 mouse_genomes_project 15 67480932 67485065 + MGP_NODShiLtJ_P0040730 Trmt12 protein_coding protein_coding MGP_NODShiLtJ_T0012982.1 MGP_NODShiLtJ_G0011090.1 mouse_genomes_project 15 102794657 102795140 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040503.1 MGP_NODShiLtJ_G0021626.1 mouse_genomes_project 15 39847039 39856498 - MGP_NODShiLtJ_P0040503 Cox6c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040504.1 MGP_NODShiLtJ_G0021626.1 mouse_genomes_project 15 39853157 39859396 - MGP_NODShiLtJ_P0040504 Cox6c protein_coding protein_coding MGP_NODShiLtJ_T0040505.1 MGP_NODShiLtJ_G0021626.1 mouse_genomes_project 15 39853161 39858795 - MGP_NODShiLtJ_P0040505 Cox6c protein_coding protein_coding MGP_NODShiLtJ_T0040506.1 MGP_NODShiLtJ_G0021626.1 mouse_genomes_project 15 39853164 39859357 - Cox6c protein_coding retained_intron MGP_NODShiLtJ_T0040507.1 MGP_NODShiLtJ_G0021626.1 mouse_genomes_project 15 39856553 39859159 - MGP_NODShiLtJ_P0040507 Cox6c protein_coding protein_coding MGP_NODShiLtJ_T0040740.1 MGP_NODShiLtJ_G0021719.1 mouse_genomes_project 15 67969765 68023287 - MGP_NODShiLtJ_P0040740 E430025E21Rik protein_coding protein_coding MGP_NODShiLtJ_T0041253.1 MGP_NODShiLtJ_G0021858.1 mouse_genomes_project 15 88278218 88285711 - MGP_NODShiLtJ_P0041253 Apol7a protein_coding protein_coding MGP_NODShiLtJ_T0041254.1 MGP_NODShiLtJ_G0021858.1 mouse_genomes_project 15 88282664 88286187 - Apol7a protein_coding retained_intron MGP_NODShiLtJ_T0041255.1 MGP_NODShiLtJ_G0021858.1 mouse_genomes_project 15 88282746 88288041 - MGP_NODShiLtJ_P0041255 Apol7a protein_coding protein_coding MGP_NODShiLtJ_T0009965.1 MGP_NODShiLtJ_G0008098.1 mouse_genomes_project 15 87212431 87212491 + Mir6954 miRNA miRNA MGP_NODShiLtJ_T0000914.1 MGP_NODShiLtJ_G0000843.1 mouse_genomes_project 15 10754318 10756599 - TEC TEC MGP_NODShiLtJ_T0012954.1 MGP_NODShiLtJ_G0011062.1 mouse_genomes_project 15 50266795 50267137 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042270.1 MGP_NODShiLtJ_G0022169.1 mouse_genomes_project 15 112851711 112859156 + MGP_NODShiLtJ_P0042270 Gpd1 protein_coding protein_coding MGP_NODShiLtJ_T0042271.1 MGP_NODShiLtJ_G0022169.1 mouse_genomes_project 15 112851775 112857943 + MGP_NODShiLtJ_P0042271 Gpd1 protein_coding protein_coding MGP_NODShiLtJ_T0042272.1 MGP_NODShiLtJ_G0022169.1 mouse_genomes_project 15 112854187 112856233 + Gpd1 protein_coding retained_intron MGP_NODShiLtJ_T0012948.1 MGP_NODShiLtJ_G0011056.1 mouse_genomes_project 15 41516923 41518371 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040710.1 MGP_NODShiLtJ_G0021703.1 mouse_genomes_project 15 66572031 66603017 - MGP_NODShiLtJ_P0040710 Zhx1 protein_coding protein_coding MGP_NODShiLtJ_T0040711.1 MGP_NODShiLtJ_G0021703.1 mouse_genomes_project 15 66572031 66603261 - MGP_NODShiLtJ_P0040711 Zhx1 protein_coding protein_coding MGP_NODShiLtJ_T0040712.1 MGP_NODShiLtJ_G0021703.1 mouse_genomes_project 15 66572333 66603241 - MGP_NODShiLtJ_P0040712 Zhx1 protein_coding protein_coding MGP_NODShiLtJ_T0040715.1 MGP_NODShiLtJ_G0021703.1 mouse_genomes_project 15 66578033 66602986 - MGP_NODShiLtJ_P0040715 Zhx1 protein_coding protein_coding MGP_NODShiLtJ_T0040716.1 MGP_NODShiLtJ_G0021703.1 mouse_genomes_project 15 66579967 66603135 - Zhx1 protein_coding retained_intron MGP_NODShiLtJ_T0040717.1 MGP_NODShiLtJ_G0021703.1 mouse_genomes_project 15 66595674 66603313 - Zhx1 protein_coding retained_intron MGP_NODShiLtJ_T0041163.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87371185 87400731 + MGP_NODShiLtJ_P0041163 Adck5 protein_coding protein_coding MGP_NODShiLtJ_T0041164.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87371186 87400723 + MGP_NODShiLtJ_P0041164 Adck5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041165.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87371206 87400731 + Adck5 protein_coding retained_intron MGP_NODShiLtJ_T0041166.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87371216 87400731 + MGP_NODShiLtJ_P0041166 Adck5 protein_coding protein_coding MGP_NODShiLtJ_T0041167.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87371232 87396740 + Adck5 protein_coding processed_transcript MGP_NODShiLtJ_T0041168.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87371239 87400724 + Adck5 protein_coding retained_intron MGP_NODShiLtJ_T0041169.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87371240 87394635 + Adck5 protein_coding processed_transcript MGP_NODShiLtJ_T0041170.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87371301 87400565 + MGP_NODShiLtJ_P0041170 Adck5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041171.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87398352 87399085 + Adck5 protein_coding retained_intron MGP_NODShiLtJ_T0041172.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87398815 87400071 + Adck5 protein_coding retained_intron MGP_NODShiLtJ_T0041173.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87399082 87400103 + Adck5 protein_coding retained_intron MGP_NODShiLtJ_T0041174.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87399207 87400731 + Adck5 protein_coding retained_intron MGP_NODShiLtJ_T0041175.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87399736 87400078 + Adck5 protein_coding retained_intron MGP_NODShiLtJ_T0041176.1 MGP_NODShiLtJ_G0021835.1 mouse_genomes_project 15 87399878 87400631 + Adck5 protein_coding retained_intron MGP_NODShiLtJ_T0006694.1 MGP_NODShiLtJ_G0005522.1 mouse_genomes_project 15 42729571 42779318 - 2310043O21Rik lincRNA lincRNA MGP_NODShiLtJ_T0040800.1 MGP_NODShiLtJ_G0021736.1 mouse_genomes_project 15 75278933 75317059 - MGP_NODShiLtJ_P0040800 Oc90 protein_coding protein_coding MGP_NODShiLtJ_T0040801.1 MGP_NODShiLtJ_G0021736.1 mouse_genomes_project 15 75278933 75317202 - MGP_NODShiLtJ_P0040801 Oc90 protein_coding protein_coding MGP_NODShiLtJ_T0040802.1 MGP_NODShiLtJ_G0021736.1 mouse_genomes_project 15 75278933 75304571 - MGP_NODShiLtJ_P0040802 Oc90 protein_coding protein_coding MGP_NODShiLtJ_T0040803.1 MGP_NODShiLtJ_G0021736.1 mouse_genomes_project 15 75279272 75293614 - MGP_NODShiLtJ_P0040803 Oc90 protein_coding protein_coding MGP_NODShiLtJ_T0040804.1 MGP_NODShiLtJ_G0021736.1 mouse_genomes_project 15 75279400 75290814 - MGP_NODShiLtJ_P0040804 Oc90 protein_coding protein_coding MGP_NODShiLtJ_T0041803.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97703348 97716599 + MGP_NODShiLtJ_P0041803 Trmu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041804.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97703356 97721359 + MGP_NODShiLtJ_P0041804 Trmu protein_coding protein_coding MGP_NODShiLtJ_T0041805.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97703417 97706883 + MGP_NODShiLtJ_P0041805 Trmu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041806.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97703450 97717955 + Trmu protein_coding retained_intron MGP_NODShiLtJ_T0041807.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97709203 97720393 + MGP_NODShiLtJ_P0041807 Trmu protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041808.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97716577 97718472 + Trmu protein_coding retained_intron MGP_NODShiLtJ_T0041809.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97718202 97721359 + Trmu protein_coding processed_transcript MGP_NODShiLtJ_T0041810.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97718746 97721026 + Trmu protein_coding retained_intron MGP_NODShiLtJ_T0041811.1 MGP_NODShiLtJ_G0022027.1 mouse_genomes_project 15 97718876 97721361 + Trmu protein_coding retained_intron MGP_NODShiLtJ_T0042045.1 MGP_NODShiLtJ_G0022093.1 mouse_genomes_project 15 108553314 108557101 - MGP_NODShiLtJ_P0042045 A130051J06Rik protein_coding protein_coding MGP_NODShiLtJ_T0041945.1 MGP_NODShiLtJ_G0022065.1 mouse_genomes_project 15 101533965 101544504 + MGP_NODShiLtJ_P0041945 Mapk8ip2 protein_coding protein_coding MGP_NODShiLtJ_T0041946.1 MGP_NODShiLtJ_G0022065.1 mouse_genomes_project 15 101535107 101536724 + MGP_NODShiLtJ_P0041946 Mapk8ip2 protein_coding protein_coding MGP_NODShiLtJ_T0009993.1 MGP_NODShiLtJ_G0008126.1 mouse_genomes_project 15 101358927 101359002 - Mir6959 miRNA miRNA MGP_NODShiLtJ_T0041076.1 MGP_NODShiLtJ_G0021816.1 mouse_genomes_project 15 87012123 87040347 + MGP_NODShiLtJ_P0041076 Spatc1 protein_coding protein_coding MGP_NODShiLtJ_T0003555.1 MGP_NODShiLtJ_G0003221.1 mouse_genomes_project 15 86322734 86324857 + Gm15945 antisense antisense MGP_NODShiLtJ_T0041814.1 MGP_NODShiLtJ_G0022029.1 mouse_genomes_project 15 97898451 97991538 + MGP_NODShiLtJ_P0041814 Gramd4 protein_coding protein_coding MGP_NODShiLtJ_T0041815.1 MGP_NODShiLtJ_G0022029.1 mouse_genomes_project 15 97899483 97991522 + MGP_NODShiLtJ_P0041815 Gramd4 protein_coding protein_coding MGP_NODShiLtJ_T0041816.1 MGP_NODShiLtJ_G0022029.1 mouse_genomes_project 15 97899628 97991535 + MGP_NODShiLtJ_P0041816 Gramd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041817.1 MGP_NODShiLtJ_G0022029.1 mouse_genomes_project 15 97909602 97976288 + Gramd4 protein_coding processed_transcript MGP_NODShiLtJ_T0041818.1 MGP_NODShiLtJ_G0022029.1 mouse_genomes_project 15 97916485 97936659 + Gramd4 protein_coding processed_transcript MGP_NODShiLtJ_T0042187.1 MGP_NODShiLtJ_G0022142.1 mouse_genomes_project 15 111876944 111917759 - MGP_NODShiLtJ_P0042187 Kmt2d protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042188.1 MGP_NODShiLtJ_G0022142.1 mouse_genomes_project 15 111876945 111917395 - MGP_NODShiLtJ_P0042188 Kmt2d protein_coding protein_coding MGP_NODShiLtJ_T0042189.1 MGP_NODShiLtJ_G0022142.1 mouse_genomes_project 15 111876948 111917405 - MGP_NODShiLtJ_P0042189 Kmt2d protein_coding protein_coding MGP_NODShiLtJ_T0042190.1 MGP_NODShiLtJ_G0022142.1 mouse_genomes_project 15 111879544 111882365 - MGP_NODShiLtJ_P0042190 Kmt2d protein_coding protein_coding MGP_NODShiLtJ_T0042191.1 MGP_NODShiLtJ_G0022142.1 mouse_genomes_project 15 111900170 111901766 - MGP_NODShiLtJ_P0042191 Kmt2d protein_coding protein_coding MGP_NODShiLtJ_T0040574.1 MGP_NODShiLtJ_G0021647.1 mouse_genomes_project 15 43079311 43112290 + MGP_NODShiLtJ_P0040574 Fzd6 protein_coding protein_coding MGP_NODShiLtJ_T0040575.1 MGP_NODShiLtJ_G0021647.1 mouse_genomes_project 15 43079364 43112290 + MGP_NODShiLtJ_P0040575 Fzd6 protein_coding protein_coding MGP_NODShiLtJ_T0012956.1 MGP_NODShiLtJ_G0011064.1 mouse_genomes_project 15 54067755 54084235 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009948.1 MGP_NODShiLtJ_G0008081.1 mouse_genomes_project 15 40820847 40820921 - Gm25303 miRNA miRNA MGP_NODShiLtJ_T0040863.1 MGP_NODShiLtJ_G0021755.1 mouse_genomes_project 15 83549482 83792461 - MGP_NODShiLtJ_P0040863 Ptk2 protein_coding protein_coding MGP_NODShiLtJ_T0040864.1 MGP_NODShiLtJ_G0021755.1 mouse_genomes_project 15 83565458 83728907 - MGP_NODShiLtJ_P0040864 Ptk2 protein_coding protein_coding MGP_NODShiLtJ_T0006699.1 MGP_NODShiLtJ_G0005527.1 mouse_genomes_project 15 48285170 48334732 - Gm10373 lincRNA lincRNA MGP_NODShiLtJ_T0009988.1 MGP_NODShiLtJ_G0008121.1 mouse_genomes_project 15 97513404 97513489 + Mirlet7b miRNA miRNA MGP_NODShiLtJ_T0042252.1 MGP_NODShiLtJ_G0022164.1 mouse_genomes_project 15 112722629 112726598 + MGP_NODShiLtJ_P0042252 Aqp6 protein_coding protein_coding MGP_NODShiLtJ_T0042049.1 MGP_NODShiLtJ_G0022096.1 mouse_genomes_project 15 109078752 109147534 + MGP_NODShiLtJ_P0042049 Arid2 protein_coding protein_coding MGP_NODShiLtJ_T0042050.1 MGP_NODShiLtJ_G0022096.1 mouse_genomes_project 15 109078807 109206434 + MGP_NODShiLtJ_P0042050 Arid2 protein_coding protein_coding MGP_NODShiLtJ_T0042051.1 MGP_NODShiLtJ_G0022096.1 mouse_genomes_project 15 109152335 109155310 + Arid2 protein_coding retained_intron MGP_NODShiLtJ_T0042052.1 MGP_NODShiLtJ_G0022096.1 mouse_genomes_project 15 109168302 109205043 + Arid2 protein_coding retained_intron MGP_NODShiLtJ_T0041323.1 MGP_NODShiLtJ_G0021883.1 mouse_genomes_project 15 89895295 89905453 + MGP_NODShiLtJ_P0041323 Cdc42ep1 protein_coding protein_coding MGP_NODShiLtJ_T0041195.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87487143 87521958 + MGP_NODShiLtJ_P0041195 Ppp1r16a protein_coding protein_coding MGP_NODShiLtJ_T0041196.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87487175 87517854 + Ppp1r16a protein_coding processed_transcript MGP_NODShiLtJ_T0041197.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87516225 87517401 + Ppp1r16a protein_coding processed_transcript MGP_NODShiLtJ_T0041198.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87517451 87521958 + Ppp1r16a protein_coding retained_intron MGP_NODShiLtJ_T0041199.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87517573 87521954 + MGP_NODShiLtJ_P0041199 Ppp1r16a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041200.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87518477 87520388 + Ppp1r16a protein_coding retained_intron MGP_NODShiLtJ_T0041201.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87518492 87520552 + MGP_NODShiLtJ_P0041201 Ppp1r16a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041202.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87518735 87519532 + Ppp1r16a protein_coding retained_intron MGP_NODShiLtJ_T0041203.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87519846 87521958 + Ppp1r16a protein_coding retained_intron MGP_NODShiLtJ_T0041204.1 MGP_NODShiLtJ_G0021842.1 mouse_genomes_project 15 87519955 87521958 + Ppp1r16a protein_coding retained_intron MGP_NODShiLtJ_T0098281.1 MGP_NODShiLtJ_G0036689.1 mouse_genomes_project 15 107789753 107860202 - 1700129L04Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0098282.1 MGP_NODShiLtJ_G0036689.1 mouse_genomes_project 15 107789827 107846054 - 1700129L04Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0041520.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92194732 92228243 + MGP_NODShiLtJ_P0041520 Sgsm3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041521.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92194749 92233461 + MGP_NODShiLtJ_P0041521 Sgsm3 protein_coding protein_coding MGP_NODShiLtJ_T0041522.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92194752 92234014 + Sgsm3 protein_coding processed_transcript MGP_NODShiLtJ_T0041523.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92194773 92225913 + Sgsm3 protein_coding processed_transcript MGP_NODShiLtJ_T0041524.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92194773 92228225 + MGP_NODShiLtJ_P0041524 Sgsm3 protein_coding protein_coding MGP_NODShiLtJ_T0041525.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92194790 92225913 + Sgsm3 protein_coding processed_transcript MGP_NODShiLtJ_T0041527.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92229665 92231675 + Sgsm3 protein_coding retained_intron MGP_NODShiLtJ_T0041528.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92230086 92232261 + MGP_NODShiLtJ_P0041528 Sgsm3 protein_coding protein_coding MGP_NODShiLtJ_T0041529.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92230977 92232024 + Sgsm3 protein_coding retained_intron MGP_NODShiLtJ_T0041530.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92231582 92233614 + Sgsm3 protein_coding retained_intron MGP_NODShiLtJ_T0041531.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92232359 92233481 + Sgsm3 protein_coding retained_intron MGP_NODShiLtJ_T0041532.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92232449 92233466 + Sgsm3 protein_coding retained_intron MGP_NODShiLtJ_T0041533.1 MGP_NODShiLtJ_G0021935.1 mouse_genomes_project 15 92232601 92233360 + Sgsm3 protein_coding retained_intron MGP_NODShiLtJ_T0042409.1 MGP_NODShiLtJ_G0022219.1 mouse_genomes_project 15 115184914 115192365 - MGP_NODShiLtJ_P0042409 Krt2 protein_coding protein_coding MGP_NODShiLtJ_T0040474.1 MGP_NODShiLtJ_G0021614.1 mouse_genomes_project 15 37852020 37903848 + MGP_NODShiLtJ_P0040474 Laptm4b protein_coding protein_coding MGP_NODShiLtJ_T0011269.1 MGP_NODShiLtJ_G0009402.1 mouse_genomes_project 15 738315 738585 + Gm23228 misc_RNA misc_RNA MGP_NODShiLtJ_T0040303.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8045977 8210991 + Prlr protein_coding retained_intron MGP_NODShiLtJ_T0040304.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8046153 8231339 + Prlr protein_coding processed_transcript MGP_NODShiLtJ_T0040305.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8046385 8231609 + MGP_NODShiLtJ_P0040305 Prlr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040306.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8046394 8218610 + MGP_NODShiLtJ_P0040306 Prlr protein_coding protein_coding MGP_NODShiLtJ_T0040307.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8046520 8202906 + Prlr protein_coding retained_intron MGP_NODShiLtJ_T0040308.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8083966 8202194 + Prlr protein_coding processed_transcript MGP_NODShiLtJ_T0040309.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8086580 8202260 + MGP_NODShiLtJ_P0040309 Prlr protein_coding protein_coding MGP_NODShiLtJ_T0040310.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8094690 8232241 + MGP_NODShiLtJ_P0040310 Prlr protein_coding protein_coding MGP_NODShiLtJ_T0040311.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8094690 8225034 + MGP_NODShiLtJ_P0040311 Prlr protein_coding protein_coding MGP_NODShiLtJ_T0040312.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8094690 8228833 + MGP_NODShiLtJ_P0040312 Prlr protein_coding protein_coding MGP_NODShiLtJ_T0040313.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8124689 8205408 + MGP_NODShiLtJ_P0040313 Prlr protein_coding protein_coding MGP_NODShiLtJ_T0040314.1 MGP_NODShiLtJ_G0021557.1 mouse_genomes_project 15 8197007 8205390 + MGP_NODShiLtJ_P0040314 Prlr protein_coding protein_coding MGP_NODShiLtJ_T0040848.1 MGP_NODShiLtJ_G0021748.1 mouse_genomes_project 15 78601381 78770836 + MGP_NODShiLtJ_P0040848 Khdrbs3 protein_coding protein_coding MGP_NODShiLtJ_T0041249.1 MGP_NODShiLtJ_G0021857.1 mouse_genomes_project 15 87942140 88182438 - MGP_NODShiLtJ_P0041249 Rbfox2 protein_coding protein_coding MGP_NODShiLtJ_T0041250.1 MGP_NODShiLtJ_G0021857.1 mouse_genomes_project 15 87942141 88020350 - MGP_NODShiLtJ_P0041250 Rbfox2 protein_coding protein_coding MGP_NODShiLtJ_T0041251.1 MGP_NODShiLtJ_G0021857.1 mouse_genomes_project 15 87942141 88182438 - MGP_NODShiLtJ_P0041251 Rbfox2 protein_coding protein_coding MGP_NODShiLtJ_T0041252.1 MGP_NODShiLtJ_G0021857.1 mouse_genomes_project 15 87942141 88020350 - MGP_NODShiLtJ_P0041252 Rbfox2 protein_coding protein_coding MGP_NODShiLtJ_T0098906.1 MGP_NODShiLtJ_G0037300.1 mouse_genomes_project 15 83035476 83035543 - Gm28020 snRNA snRNA MGP_NODShiLtJ_T0041306.1 MGP_NODShiLtJ_G0021874.1 mouse_genomes_project 15 89452117 89482110 - MGP_NODShiLtJ_P0041306 Tmprss6 protein_coding protein_coding MGP_NODShiLtJ_T0000923.1 MGP_NODShiLtJ_G0000852.1 mouse_genomes_project 15 97458276 97461623 + TEC TEC MGP_NODShiLtJ_T0040811.1 MGP_NODShiLtJ_G0021741.1 mouse_genomes_project 15 76024646 76117791 + MGP_NODShiLtJ_P0040811 Phf20l1 protein_coding protein_coding MGP_NODShiLtJ_T0040862.1 MGP_NODShiLtJ_G0021754.1 mouse_genomes_project 15 83435455 83527835 - MGP_NODShiLtJ_P0040862 Ago2 protein_coding protein_coding MGP_NODShiLtJ_T0041290.1 MGP_NODShiLtJ_G0021870.1 mouse_genomes_project 15 89384009 89394178 - MGP_NODShiLtJ_P0041290 Tex33 protein_coding protein_coding MGP_NODShiLtJ_T0041291.1 MGP_NODShiLtJ_G0021870.1 mouse_genomes_project 15 89384009 89401304 - MGP_NODShiLtJ_P0041291 Tex33 protein_coding protein_coding MGP_NODShiLtJ_T0041292.1 MGP_NODShiLtJ_G0021870.1 mouse_genomes_project 15 89384009 89401304 - MGP_NODShiLtJ_P0041292 Tex33 protein_coding protein_coding MGP_NODShiLtJ_T0042213.1 MGP_NODShiLtJ_G0022155.1 mouse_genomes_project 15 112370166 112387183 - MGP_NODShiLtJ_P0042213 Fam186b protein_coding protein_coding MGP_NODShiLtJ_T0041871.1 MGP_NODShiLtJ_G0022046.1 mouse_genomes_project 15 101162221 101167711 - Hdac10 protein_coding processed_transcript MGP_NODShiLtJ_T0041872.1 MGP_NODShiLtJ_G0022046.1 mouse_genomes_project 15 101162221 101167758 - MGP_NODShiLtJ_P0041872 Hdac10 protein_coding protein_coding MGP_NODShiLtJ_T0041873.1 MGP_NODShiLtJ_G0022046.1 mouse_genomes_project 15 101162223 101167719 - Hdac10 protein_coding retained_intron MGP_NODShiLtJ_T0041874.1 MGP_NODShiLtJ_G0022046.1 mouse_genomes_project 15 101162223 101167709 - Hdac10 protein_coding retained_intron MGP_NODShiLtJ_T0041875.1 MGP_NODShiLtJ_G0022046.1 mouse_genomes_project 15 101162225 101167737 - Hdac10 protein_coding retained_intron MGP_NODShiLtJ_T0041876.1 MGP_NODShiLtJ_G0022046.1 mouse_genomes_project 15 101162486 101167506 - MGP_NODShiLtJ_P0041876 Hdac10 protein_coding protein_coding MGP_NODShiLtJ_T0041877.1 MGP_NODShiLtJ_G0022046.1 mouse_genomes_project 15 101162588 101164605 - Hdac10 protein_coding processed_transcript MGP_NODShiLtJ_T0041878.1 MGP_NODShiLtJ_G0022046.1 mouse_genomes_project 15 101164899 101166548 - Hdac10 protein_coding processed_transcript MGP_NODShiLtJ_T0040873.1 MGP_NODShiLtJ_G0021757.1 mouse_genomes_project 15 83968422 83997761 - MGP_NODShiLtJ_P0040873 Slc45a4 protein_coding protein_coding MGP_NODShiLtJ_T0040874.1 MGP_NODShiLtJ_G0021757.1 mouse_genomes_project 15 83968432 84016983 - MGP_NODShiLtJ_P0040874 Slc45a4 protein_coding protein_coding MGP_NODShiLtJ_T0040875.1 MGP_NODShiLtJ_G0021757.1 mouse_genomes_project 15 83971292 83997747 - MGP_NODShiLtJ_P0040875 Slc45a4 protein_coding protein_coding MGP_NODShiLtJ_T0040876.1 MGP_NODShiLtJ_G0021757.1 mouse_genomes_project 15 83971292 84009603 - MGP_NODShiLtJ_P0040876 Slc45a4 protein_coding protein_coding MGP_NODShiLtJ_T0040877.1 MGP_NODShiLtJ_G0021757.1 mouse_genomes_project 15 83971295 84016983 - MGP_NODShiLtJ_P0040877 Slc45a4 protein_coding protein_coding MGP_NODShiLtJ_T0040878.1 MGP_NODShiLtJ_G0021757.1 mouse_genomes_project 15 83979411 83981480 - MGP_NODShiLtJ_P0040878 Slc45a4 protein_coding protein_coding MGP_NODShiLtJ_T0040879.1 MGP_NODShiLtJ_G0021757.1 mouse_genomes_project 15 83998227 84038638 - Slc45a4 protein_coding processed_transcript MGP_NODShiLtJ_T0040652.1 MGP_NODShiLtJ_G0021683.1 mouse_genomes_project 15 62611163 62670468 + MGP_NODShiLtJ_P0040652 Colec10 protein_coding protein_coding MGP_NODShiLtJ_T0100158.1 MGP_NODShiLtJ_G0038552.1 mouse_genomes_project 15 35617318 35617389 - Snord123 snoRNA snoRNA MGP_NODShiLtJ_T0040564.1 MGP_NODShiLtJ_G0021642.1 mouse_genomes_project 15 42373612 42381131 + MGP_NODShiLtJ_P0040564 Odf1 protein_coding protein_coding MGP_NODShiLtJ_T0003543.1 MGP_NODShiLtJ_G0003210.1 mouse_genomes_project 15 44122904 44138225 + Gm16291 antisense antisense MGP_NODShiLtJ_T0100183.1 MGP_NODShiLtJ_G0038577.1 mouse_genomes_project 15 91638846 91638983 - Gm23220 snoRNA snoRNA MGP_NODShiLtJ_T0040980.1 MGP_NODShiLtJ_G0021791.1 mouse_genomes_project 15 86278091 86286727 + MGP_NODShiLtJ_P0040980 Zfp41 protein_coding protein_coding MGP_NODShiLtJ_T0040981.1 MGP_NODShiLtJ_G0021791.1 mouse_genomes_project 15 86278096 86286720 + MGP_NODShiLtJ_P0040981 Zfp41 protein_coding protein_coding MGP_NODShiLtJ_T0040982.1 MGP_NODShiLtJ_G0021791.1 mouse_genomes_project 15 86278138 86280091 + MGP_NODShiLtJ_P0040982 Zfp41 protein_coding protein_coding MGP_NODShiLtJ_T0040983.1 MGP_NODShiLtJ_G0021791.1 mouse_genomes_project 15 86283157 86285257 + Zfp41 protein_coding processed_transcript MGP_NODShiLtJ_T0040825.1 MGP_NODShiLtJ_G0021744.1 mouse_genomes_project 15 76377107 76409038 + MGP_NODShiLtJ_P0040825 Wisp1 protein_coding protein_coding MGP_NODShiLtJ_T0040826.1 MGP_NODShiLtJ_G0021744.1 mouse_genomes_project 15 76377174 76405914 + MGP_NODShiLtJ_P0040826 Wisp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040827.1 MGP_NODShiLtJ_G0021744.1 mouse_genomes_project 15 76377295 76405275 + MGP_NODShiLtJ_P0040827 Wisp1 protein_coding protein_coding MGP_NODShiLtJ_T0040828.1 MGP_NODShiLtJ_G0021744.1 mouse_genomes_project 15 76395117 76405055 + Wisp1 protein_coding processed_transcript MGP_NODShiLtJ_T0042534.1 MGP_NODShiLtJ_G0022259.1 mouse_genomes_project 15 116446796 116495942 + Hoxc5 protein_coding processed_transcript MGP_NODShiLtJ_T0042542.1 MGP_NODShiLtJ_G0022259.1 mouse_genomes_project 15 116494080 116497695 + MGP_NODShiLtJ_P0042542 Hoxc5 protein_coding protein_coding MGP_NODShiLtJ_T0009941.1 MGP_NODShiLtJ_G0008074.1 mouse_genomes_project 15 28487192 28487253 + Mir7212 miRNA miRNA MGP_NODShiLtJ_T0006738.1 MGP_NODShiLtJ_G0005550.1 mouse_genomes_project 15 108835123 108863882 - D030018L15Rik lincRNA lincRNA MGP_NODShiLtJ_T0006739.1 MGP_NODShiLtJ_G0005550.1 mouse_genomes_project 15 108835123 108862589 - D030018L15Rik lincRNA lincRNA MGP_NODShiLtJ_T0006740.1 MGP_NODShiLtJ_G0005550.1 mouse_genomes_project 15 108857792 108864008 - D030018L15Rik lincRNA lincRNA MGP_NODShiLtJ_T0040748.1 MGP_NODShiLtJ_G0021724.1 mouse_genomes_project 15 69665164 69668846 - MGP_NODShiLtJ_P0040748 A1bg protein_coding protein_coding MGP_NODShiLtJ_T0041644.1 MGP_NODShiLtJ_G0021965.1 mouse_genomes_project 15 93552858 93556579 - MGP_NODShiLtJ_P0041644 Tnfrsf13c protein_coding protein_coding MGP_NODShiLtJ_T0040668.1 MGP_NODShiLtJ_G0021690.1 mouse_genomes_project 15 63374282 63535317 + MGP_NODShiLtJ_P0040668 Deptor protein_coding protein_coding MGP_NODShiLtJ_T0040669.1 MGP_NODShiLtJ_G0021690.1 mouse_genomes_project 15 63374389 63486005 + MGP_NODShiLtJ_P0040669 Deptor protein_coding protein_coding MGP_NODShiLtJ_T0040670.1 MGP_NODShiLtJ_G0021690.1 mouse_genomes_project 15 63395450 63530250 + MGP_NODShiLtJ_P0040670 Deptor protein_coding protein_coding MGP_NODShiLtJ_T0040456.1 MGP_NODShiLtJ_G0021607.1 mouse_genomes_project 15 34908758 34929191 + Fam173b protein_coding processed_transcript MGP_NODShiLtJ_T0040457.1 MGP_NODShiLtJ_G0021607.1 mouse_genomes_project 15 34909024 34925490 + MGP_NODShiLtJ_P0040457 Fam173b protein_coding protein_coding MGP_NODShiLtJ_T0040458.1 MGP_NODShiLtJ_G0021607.1 mouse_genomes_project 15 34909024 34926564 + MGP_NODShiLtJ_P0040458 Fam173b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040299.1 MGP_NODShiLtJ_G0021556.1 mouse_genomes_project 15 7296337 7528078 - MGP_NODShiLtJ_P0040299 protein_coding protein_coding MGP_NODShiLtJ_T0040300.1 MGP_NODShiLtJ_G0021556.1 mouse_genomes_project 15 7453723 7528060 - MGP_NODShiLtJ_P0040300 protein_coding protein_coding MGP_NODShiLtJ_T0040301.1 MGP_NODShiLtJ_G0021556.1 mouse_genomes_project 15 7476250 7528060 - MGP_NODShiLtJ_P0040301 protein_coding protein_coding MGP_NODShiLtJ_T0040302.1 MGP_NODShiLtJ_G0021556.1 mouse_genomes_project 15 7476253 7528017 - MGP_NODShiLtJ_P0040302 protein_coding protein_coding MGP_NODShiLtJ_T0040654.1 MGP_NODShiLtJ_G0021685.1 mouse_genomes_project 15 62964053 62974376 + MGP_NODShiLtJ_P0040654 Nov protein_coding protein_coding MGP_NODShiLtJ_T0012951.1 MGP_NODShiLtJ_G0011059.1 mouse_genomes_project 15 43275937 43276868 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003542.1 MGP_NODShiLtJ_G0003209.1 mouse_genomes_project 15 41447824 41449126 + Gm28221 antisense antisense MGP_NODShiLtJ_T0098913.1 MGP_NODShiLtJ_G0037307.1 mouse_genomes_project 15 92264022 92264173 + Gm25131 snRNA snRNA MGP_NODShiLtJ_T0012943.1 MGP_NODShiLtJ_G0011051.1 mouse_genomes_project 15 24765120 24766875 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040890.1 MGP_NODShiLtJ_G0021761.1 mouse_genomes_project 15 84234872 84240224 + MGP_NODShiLtJ_P0040890 Gm6569 protein_coding protein_coding MGP_NODShiLtJ_T0006679.1 MGP_NODShiLtJ_G0005511.1 mouse_genomes_project 15 8619247 8707949 + 4930556M19Rik lincRNA lincRNA MGP_NODShiLtJ_T0041297.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89440989 89450947 + MGP_NODShiLtJ_P0041297 Kctd17 protein_coding protein_coding MGP_NODShiLtJ_T0041298.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89440989 89450947 + MGP_NODShiLtJ_P0041298 Kctd17 protein_coding protein_coding MGP_NODShiLtJ_T0041299.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89441053 89451359 + MGP_NODShiLtJ_P0041299 Kctd17 protein_coding protein_coding MGP_NODShiLtJ_T0041300.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89441087 89451293 + MGP_NODShiLtJ_P0041300 Kctd17 protein_coding protein_coding MGP_NODShiLtJ_T0041301.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89441116 89448310 + Kctd17 protein_coding retained_intron MGP_NODShiLtJ_T0041302.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89441221 89451097 + MGP_NODShiLtJ_P0041302 Kctd17 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041303.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89442535 89451030 + MGP_NODShiLtJ_P0041303 Kctd17 protein_coding protein_coding MGP_NODShiLtJ_T0041304.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89445436 89450184 + Kctd17 protein_coding retained_intron MGP_NODShiLtJ_T0041305.1 MGP_NODShiLtJ_G0021873.1 mouse_genomes_project 15 89446431 89450029 + Kctd17 protein_coding retained_intron MGP_NODShiLtJ_T0040514.1 MGP_NODShiLtJ_G0021629.1 mouse_genomes_project 15 40143661 40210806 + MGP_NODShiLtJ_P0040514 Spag1 protein_coding protein_coding MGP_NODShiLtJ_T0040515.1 MGP_NODShiLtJ_G0021629.1 mouse_genomes_project 15 40143823 40210357 + MGP_NODShiLtJ_P0040515 Spag1 protein_coding protein_coding MGP_NODShiLtJ_T0098481.1 MGP_NODShiLtJ_G0036879.1 mouse_genomes_project 15 67383564 67385055 - Gm20712 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0042408.1 MGP_NODShiLtJ_G0022218.1 mouse_genomes_project 15 115166271 115175307 - MGP_NODShiLtJ_P0042408 Krt73 protein_coding protein_coding MGP_NODShiLtJ_T0040918.1 MGP_NODShiLtJ_G0021771.1 mouse_genomes_project 15 85197238 85202434 - MGP_NODShiLtJ_P0040918 Lynx1 protein_coding protein_coding MGP_NODShiLtJ_T0040919.1 MGP_NODShiLtJ_G0021771.1 mouse_genomes_project 15 85200981 85202402 - MGP_NODShiLtJ_P0040919 Lynx1 protein_coding protein_coding MGP_NODShiLtJ_T0040920.1 MGP_NODShiLtJ_G0021771.1 mouse_genomes_project 15 85201706 85202412 - Lynx1 protein_coding retained_intron MGP_NODShiLtJ_T0041239.1 MGP_NODShiLtJ_G0021855.1 mouse_genomes_project 15 87872617 87879862 - MGP_NODShiLtJ_P0041239 Mb protein_coding protein_coding MGP_NODShiLtJ_T0041240.1 MGP_NODShiLtJ_G0021855.1 mouse_genomes_project 15 87872617 87910440 - MGP_NODShiLtJ_P0041240 Mb protein_coding protein_coding MGP_NODShiLtJ_T0041241.1 MGP_NODShiLtJ_G0021855.1 mouse_genomes_project 15 87872617 87879802 - MGP_NODShiLtJ_P0041241 Mb protein_coding protein_coding MGP_NODShiLtJ_T0042328.1 MGP_NODShiLtJ_G0022188.1 mouse_genomes_project 15 113823553 113829702 + MGP_NODShiLtJ_P0042328 Dazap2 protein_coding protein_coding MGP_NODShiLtJ_T0040746.1 MGP_NODShiLtJ_G0021723.1 mouse_genomes_project 15 69553688 69559774 - MGP_NODShiLtJ_P0040746 Fam84b protein_coding protein_coding MGP_NODShiLtJ_T0040747.1 MGP_NODShiLtJ_G0021723.1 mouse_genomes_project 15 69559725 69594273 - Fam84b protein_coding processed_transcript MGP_NODShiLtJ_T0017323.1 MGP_NODShiLtJ_G0015168.1 mouse_genomes_project 15 77944063 77946780 - Gm26621 processed_transcript TEC MGP_NODShiLtJ_T0017324.1 MGP_NODShiLtJ_G0015168.1 mouse_genomes_project 15 77944484 77946760 - Gm26621 processed_transcript processed_transcript MGP_NODShiLtJ_T0098884.1 MGP_NODShiLtJ_G0037278.1 mouse_genomes_project 15 27205744 27205902 - Gm22810 snRNA snRNA MGP_NODShiLtJ_T0041742.1 MGP_NODShiLtJ_G0022002.1 mouse_genomes_project 15 95847524 95875932 + MGP_NODShiLtJ_P0041742 Pnpla3 protein_coding protein_coding MGP_NODShiLtJ_T0042064.1 MGP_NODShiLtJ_G0022105.1 mouse_genomes_project 15 110634289 110654680 - MGP_NODShiLtJ_P0042064 Endou protein_coding protein_coding MGP_NODShiLtJ_T0042065.1 MGP_NODShiLtJ_G0022105.1 mouse_genomes_project 15 110634289 110644410 - MGP_NODShiLtJ_P0042065 Endou protein_coding protein_coding MGP_NODShiLtJ_T0012992.1 MGP_NODShiLtJ_G0011100.1 mouse_genomes_project 15 117096213 117101992 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042339.1 MGP_NODShiLtJ_G0022192.1 mouse_genomes_project 15 113909196 113947719 - MGP_NODShiLtJ_P0042339 Galnt6 protein_coding protein_coding MGP_NODShiLtJ_T0042340.1 MGP_NODShiLtJ_G0022192.1 mouse_genomes_project 15 113909198 113947719 - MGP_NODShiLtJ_P0042340 Galnt6 protein_coding protein_coding MGP_NODShiLtJ_T0042341.1 MGP_NODShiLtJ_G0022192.1 mouse_genomes_project 15 113910247 113938944 - MGP_NODShiLtJ_P0042341 Galnt6 protein_coding protein_coding MGP_NODShiLtJ_T0042273.1 MGP_NODShiLtJ_G0022170.1 mouse_genomes_project 15 112859769 112862907 + MGP_NODShiLtJ_P0042273 Cox14 protein_coding protein_coding MGP_NODShiLtJ_T0040653.1 MGP_NODShiLtJ_G0021684.1 mouse_genomes_project 15 62776674 62808280 + MGP_NODShiLtJ_P0040653 Mal2 protein_coding protein_coding MGP_NODShiLtJ_T0100147.1 MGP_NODShiLtJ_G0038541.1 mouse_genomes_project 15 9326849 9326976 - Gm24844 snoRNA snoRNA MGP_NODShiLtJ_T0040335.1 MGP_NODShiLtJ_G0021563.1 mouse_genomes_project 15 8390599 8423166 - MGP_NODShiLtJ_P0040335 Ttc23l protein_coding protein_coding MGP_NODShiLtJ_T0040336.1 MGP_NODShiLtJ_G0021563.1 mouse_genomes_project 15 8394445 8454763 - MGP_NODShiLtJ_P0040336 Ttc23l protein_coding protein_coding MGP_NODShiLtJ_T0040337.1 MGP_NODShiLtJ_G0021563.1 mouse_genomes_project 15 8433018 8454745 - MGP_NODShiLtJ_P0040337 Ttc23l protein_coding protein_coding MGP_NODShiLtJ_T0042280.1 MGP_NODShiLtJ_G0022172.1 mouse_genomes_project 15 112916190 113021038 - MGP_NODShiLtJ_P0042280 Lima1 protein_coding protein_coding MGP_NODShiLtJ_T0042281.1 MGP_NODShiLtJ_G0022172.1 mouse_genomes_project 15 112918949 112921617 - Lima1 protein_coding retained_intron MGP_NODShiLtJ_T0042282.1 MGP_NODShiLtJ_G0022172.1 mouse_genomes_project 15 112985451 113020933 - Lima1 protein_coding retained_intron MGP_NODShiLtJ_T0100164.1 MGP_NODShiLtJ_G0038558.1 mouse_genomes_project 15 43114680 43114811 + Gm24789 snoRNA snoRNA MGP_NODShiLtJ_T0011272.1 MGP_NODShiLtJ_G0009405.1 mouse_genomes_project 15 10038723 10038983 + Gm24074 misc_RNA misc_RNA MGP_NODShiLtJ_T0040734.1 MGP_NODShiLtJ_G0021717.1 mouse_genomes_project 15 67550056 67695505 - MGP_NODShiLtJ_P0040734 Mtss1 protein_coding protein_coding MGP_NODShiLtJ_T0040735.1 MGP_NODShiLtJ_G0021717.1 mouse_genomes_project 15 67552242 67583214 - MGP_NODShiLtJ_P0040735 Mtss1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041386.1 MGP_NODShiLtJ_G0021899.1 mouse_genomes_project 15 90332750 90336499 - MGP_NODShiLtJ_P0041386 Slc16a8 protein_coding protein_coding MGP_NODShiLtJ_T0041744.1 MGP_NODShiLtJ_G0022004.1 mouse_genomes_project 15 95922642 96020223 + MGP_NODShiLtJ_P0041744 Parvb protein_coding protein_coding MGP_NODShiLtJ_T0041745.1 MGP_NODShiLtJ_G0022004.1 mouse_genomes_project 15 95922665 95963409 + MGP_NODShiLtJ_P0041745 Parvb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041746.1 MGP_NODShiLtJ_G0022004.1 mouse_genomes_project 15 95949198 95988202 + Parvb protein_coding processed_transcript MGP_NODShiLtJ_T0041747.1 MGP_NODShiLtJ_G0022004.1 mouse_genomes_project 15 95963381 95967584 + Parvb protein_coding retained_intron MGP_NODShiLtJ_T0003579.1 MGP_NODShiLtJ_G0003239.1 mouse_genomes_project 15 112962931 112977934 + Gm17057 antisense antisense MGP_NODShiLtJ_T0042253.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112743811 112779543 - MGP_NODShiLtJ_P0042253 Racgap1 protein_coding protein_coding MGP_NODShiLtJ_T0042254.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112743812 112779556 - MGP_NODShiLtJ_P0042254 Racgap1 protein_coding protein_coding MGP_NODShiLtJ_T0042255.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112750937 112758475 - Racgap1 protein_coding retained_intron MGP_NODShiLtJ_T0042256.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112751217 112779489 - Racgap1 protein_coding processed_transcript MGP_NODShiLtJ_T0042257.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112754226 112779482 - Racgap1 protein_coding retained_intron MGP_NODShiLtJ_T0042258.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112754286 112765385 - MGP_NODShiLtJ_P0042258 Racgap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042259.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112754332 112763865 - Racgap1 protein_coding retained_intron MGP_NODShiLtJ_T0042260.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112757813 112779552 - MGP_NODShiLtJ_P0042260 Racgap1 protein_coding protein_coding MGP_NODShiLtJ_T0042261.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112757829 112760433 - Racgap1 protein_coding retained_intron MGP_NODShiLtJ_T0042262.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112759951 112779469 - MGP_NODShiLtJ_P0042262 Racgap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042263.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112761751 112779512 - MGP_NODShiLtJ_P0042263 Racgap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042264.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112763055 112779482 - Racgap1 protein_coding retained_intron MGP_NODShiLtJ_T0042265.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112763269 112779512 - MGP_NODShiLtJ_P0042265 Racgap1 protein_coding protein_coding MGP_NODShiLtJ_T0042266.1 MGP_NODShiLtJ_G0022165.1 mouse_genomes_project 15 112765366 112779543 - MGP_NODShiLtJ_P0042266 Racgap1 protein_coding protein_coding MGP_NODShiLtJ_T0041670.1 MGP_NODShiLtJ_G0021980.1 mouse_genomes_project 15 94221645 94223011 - MGP_NODShiLtJ_P0041670 Cyp2d37-ps protein_coding protein_coding MGP_NODShiLtJ_T0042133.1 MGP_NODShiLtJ_G0022119.1 mouse_genomes_project 15 111253684 111271572 - MGP_NODShiLtJ_P0042133 Zfp641 protein_coding protein_coding MGP_NODShiLtJ_T0042134.1 MGP_NODShiLtJ_G0022119.1 mouse_genomes_project 15 111254217 111271525 - MGP_NODShiLtJ_P0042134 Zfp641 protein_coding protein_coding MGP_NODShiLtJ_T0042562.1 MGP_NODShiLtJ_G0022268.1 mouse_genomes_project 15 116768141 116801186 + MGP_NODShiLtJ_P0042562 Copz1 protein_coding protein_coding MGP_NODShiLtJ_T0041430.1 MGP_NODShiLtJ_G0021910.1 mouse_genomes_project 15 90781214 90790605 + MGP_NODShiLtJ_P0041430 Cby1 protein_coding protein_coding MGP_NODShiLtJ_T0041387.1 MGP_NODShiLtJ_G0021900.1 mouse_genomes_project 15 90341318 90372258 - MGP_NODShiLtJ_P0041387 Baiap2l2 protein_coding protein_coding MGP_NODShiLtJ_T0041388.1 MGP_NODShiLtJ_G0021900.1 mouse_genomes_project 15 90341319 90372163 - MGP_NODShiLtJ_P0041388 Baiap2l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041389.1 MGP_NODShiLtJ_G0021900.1 mouse_genomes_project 15 90341455 90342456 - Baiap2l2 protein_coding processed_transcript MGP_NODShiLtJ_T0041390.1 MGP_NODShiLtJ_G0021900.1 mouse_genomes_project 15 90342818 90344393 - Baiap2l2 protein_coding processed_transcript MGP_NODShiLtJ_T0041391.1 MGP_NODShiLtJ_G0021900.1 mouse_genomes_project 15 90353260 90372214 - MGP_NODShiLtJ_P0041391 Baiap2l2 protein_coding protein_coding MGP_NODShiLtJ_T0042447.1 MGP_NODShiLtJ_G0022238.1 mouse_genomes_project 15 115716414 115750920 + MGP_NODShiLtJ_P0042447 Espl1 protein_coding protein_coding MGP_NODShiLtJ_T0098889.1 MGP_NODShiLtJ_G0037283.1 mouse_genomes_project 15 41712000 41712120 - Gm24833 snRNA snRNA MGP_NODShiLtJ_T0040650.1 MGP_NODShiLtJ_G0021681.1 mouse_genomes_project 15 62020776 62022468 + MGP_NODShiLtJ_P0040650 Gm7489 protein_coding protein_coding MGP_NODShiLtJ_T0040434.1 MGP_NODShiLtJ_G0021598.1 mouse_genomes_project 15 30893665 31181528 + MGP_NODShiLtJ_P0040434 Dnah5 protein_coding protein_coding MGP_NODShiLtJ_T0040956.1 MGP_NODShiLtJ_G0021785.1 mouse_genomes_project 15 85839007 85842962 + MGP_NODShiLtJ_P0040956 protein_coding protein_coding MGP_NODShiLtJ_T0040959.1 MGP_NODShiLtJ_G0021785.1 mouse_genomes_project 15 85839024 85842958 + MGP_NODShiLtJ_P0040959 protein_coding protein_coding MGP_NODShiLtJ_T0040960.1 MGP_NODShiLtJ_G0021785.1 mouse_genomes_project 15 85839024 85842506 + MGP_NODShiLtJ_P0040960 protein_coding protein_coding MGP_NODShiLtJ_T0040961.1 MGP_NODShiLtJ_G0021785.1 mouse_genomes_project 15 85839033 85842450 + MGP_NODShiLtJ_P0040961 protein_coding protein_coding MGP_NODShiLtJ_T0040962.1 MGP_NODShiLtJ_G0021785.1 mouse_genomes_project 15 85839167 85842648 + MGP_NODShiLtJ_P0040962 protein_coding protein_coding MGP_NODShiLtJ_T0040614.1 MGP_NODShiLtJ_G0021668.1 mouse_genomes_project 15 49882130 49909297 + MGP_NODShiLtJ_P0040614 Ebag9 protein_coding protein_coding MGP_NODShiLtJ_T0040615.1 MGP_NODShiLtJ_G0021668.1 mouse_genomes_project 15 49882150 49894421 + MGP_NODShiLtJ_P0040615 Ebag9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042163.1 MGP_NODShiLtJ_G0022130.1 mouse_genomes_project 15 111574010 111594256 + MGP_NODShiLtJ_P0042163 4930415O20Rik protein_coding protein_coding MGP_NODShiLtJ_T0041480.1 MGP_NODShiLtJ_G0021921.1 mouse_genomes_project 15 91135502 91155587 - MGP_NODShiLtJ_P0041480 Pdgfb protein_coding protein_coding MGP_NODShiLtJ_T0040926.1 MGP_NODShiLtJ_G0021775.1 mouse_genomes_project 15 85262310 85263669 - protein_coding processed_transcript MGP_NODShiLtJ_T0040927.1 MGP_NODShiLtJ_G0021775.1 mouse_genomes_project 15 85262310 85263669 - protein_coding processed_transcript MGP_NODShiLtJ_T0040928.1 MGP_NODShiLtJ_G0021775.1 mouse_genomes_project 15 85262310 85266195 - MGP_NODShiLtJ_P0040928 protein_coding protein_coding MGP_NODShiLtJ_T0041257.1 MGP_NODShiLtJ_G0021860.1 mouse_genomes_project 15 88521560 88527215 + MGP_NODShiLtJ_P0041257 protein_coding protein_coding MGP_NODShiLtJ_T0040585.1 MGP_NODShiLtJ_G0021653.1 mouse_genomes_project 15 44092067 44185630 - MGP_NODShiLtJ_P0040585 Dpys protein_coding protein_coding MGP_NODShiLtJ_T0040586.1 MGP_NODShiLtJ_G0021653.1 mouse_genomes_project 15 44106279 44185633 - MGP_NODShiLtJ_P0040586 Dpys protein_coding protein_coding MGP_NODShiLtJ_T0040587.1 MGP_NODShiLtJ_G0021653.1 mouse_genomes_project 15 44106286 44119111 - MGP_NODShiLtJ_P0040587 Dpys protein_coding protein_coding MGP_NODShiLtJ_T0040588.1 MGP_NODShiLtJ_G0021653.1 mouse_genomes_project 15 44184744 44185633 - Dpys protein_coding processed_transcript MGP_NODShiLtJ_T0003564.1 MGP_NODShiLtJ_G0003226.1 mouse_genomes_project 15 94449540 94456897 + Gm20324 antisense antisense MGP_NODShiLtJ_T0040447.1 MGP_NODShiLtJ_G0021604.1 mouse_genomes_project 15 34735516 34834657 - MGP_NODShiLtJ_P0040447 March6 protein_coding protein_coding MGP_NODShiLtJ_T0040639.1 MGP_NODShiLtJ_G0021676.1 mouse_genomes_project 15 59909024 59916065 + MGP_NODShiLtJ_P0040639 Aard protein_coding protein_coding MGP_NODShiLtJ_T0041333.1 MGP_NODShiLtJ_G0021887.1 mouse_genomes_project 15 89989990 89994698 + MGP_NODShiLtJ_P0041333 Lgals1 protein_coding protein_coding MGP_NODShiLtJ_T0041886.1 MGP_NODShiLtJ_G0022050.1 mouse_genomes_project 15 101227082 101242632 - MGP_NODShiLtJ_P0041886 Dennd6b protein_coding protein_coding MGP_NODShiLtJ_T0009967.1 MGP_NODShiLtJ_G0008100.1 mouse_genomes_project 15 90070391 90070453 + Mir6956 miRNA miRNA MGP_NODShiLtJ_T0042421.1 MGP_NODShiLtJ_G0022230.1 mouse_genomes_project 15 115521936 115541467 - Spryd3 protein_coding retained_intron MGP_NODShiLtJ_T0042422.1 MGP_NODShiLtJ_G0022230.1 mouse_genomes_project 15 115521936 115541509 - MGP_NODShiLtJ_P0042422 Spryd3 protein_coding protein_coding MGP_NODShiLtJ_T0042423.1 MGP_NODShiLtJ_G0022230.1 mouse_genomes_project 15 115523577 115534176 - Spryd3 protein_coding processed_transcript MGP_NODShiLtJ_T0042424.1 MGP_NODShiLtJ_G0022230.1 mouse_genomes_project 15 115535503 115536194 - Spryd3 protein_coding retained_intron MGP_NODShiLtJ_T0040671.1 MGP_NODShiLtJ_G0021691.1 mouse_genomes_project 15 63588579 63810131 + MGP_NODShiLtJ_P0040671 Col14a1 protein_coding protein_coding MGP_NODShiLtJ_T0040672.1 MGP_NODShiLtJ_G0021691.1 mouse_genomes_project 15 63588579 63810132 + MGP_NODShiLtJ_P0040672 Col14a1 protein_coding protein_coding MGP_NODShiLtJ_T0040673.1 MGP_NODShiLtJ_G0021691.1 mouse_genomes_project 15 63588580 63810130 + MGP_NODShiLtJ_P0040673 Col14a1 protein_coding protein_coding MGP_NODShiLtJ_T0040674.1 MGP_NODShiLtJ_G0021691.1 mouse_genomes_project 15 63732326 63809018 + MGP_NODShiLtJ_P0040674 Col14a1 protein_coding protein_coding MGP_NODShiLtJ_T0017311.1 MGP_NODShiLtJ_G0015162.1 mouse_genomes_project 15 65065674 65070185 + Has2os processed_transcript antisense MGP_NODShiLtJ_T0017312.1 MGP_NODShiLtJ_G0015162.1 mouse_genomes_project 15 65069276 65175027 + Has2os processed_transcript antisense MGP_NODShiLtJ_T0017313.1 MGP_NODShiLtJ_G0015162.1 mouse_genomes_project 15 65069678 65174743 + Has2os processed_transcript antisense MGP_NODShiLtJ_T0017314.1 MGP_NODShiLtJ_G0015162.1 mouse_genomes_project 15 65162350 65174706 + Has2os processed_transcript lincRNA MGP_NODShiLtJ_T0040388.1 MGP_NODShiLtJ_G0021581.1 mouse_genomes_project 15 16334549 16509303 + MGP_NODShiLtJ_P0040388 Cdh9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040389.1 MGP_NODShiLtJ_G0021581.1 mouse_genomes_project 15 16394600 16509306 + MGP_NODShiLtJ_P0040389 Cdh9 protein_coding protein_coding MGP_NODShiLtJ_T0098904.1 MGP_NODShiLtJ_G0037298.1 mouse_genomes_project 15 75084685 75084874 + Gm23907 snRNA snRNA MGP_NODShiLtJ_T0042185.1 MGP_NODShiLtJ_G0022140.1 mouse_genomes_project 15 111845043 111850461 - MGP_NODShiLtJ_P0042185 Ddn protein_coding protein_coding MGP_NODShiLtJ_T0012979.1 MGP_NODShiLtJ_G0011087.1 mouse_genomes_project 15 95689631 95689968 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041309.1 MGP_NODShiLtJ_G0021876.1 mouse_genomes_project 15 89540983 89547294 - MGP_NODShiLtJ_P0041309 C1qtnf6 protein_coding protein_coding MGP_NODShiLtJ_T0041310.1 MGP_NODShiLtJ_G0021876.1 mouse_genomes_project 15 89540984 89547294 - C1qtnf6 protein_coding processed_transcript MGP_NODShiLtJ_T0041311.1 MGP_NODShiLtJ_G0021876.1 mouse_genomes_project 15 89542760 89544996 - C1qtnf6 protein_coding processed_transcript MGP_NODShiLtJ_T0017342.1 MGP_NODShiLtJ_G0015179.1 mouse_genomes_project 15 112348090 112360418 + 1700120C14Rik processed_transcript antisense MGP_NODShiLtJ_T0017343.1 MGP_NODShiLtJ_G0015179.1 mouse_genomes_project 15 112348138 112360197 + 1700120C14Rik processed_transcript antisense MGP_NODShiLtJ_T0017344.1 MGP_NODShiLtJ_G0015179.1 mouse_genomes_project 15 112348140 112351026 + 1700120C14Rik processed_transcript retained_intron MGP_NODShiLtJ_T0040344.1 MGP_NODShiLtJ_G0021568.1 mouse_genomes_project 15 8969499 8973774 - MGP_NODShiLtJ_P0040344 Rxfp3 protein_coding protein_coding MGP_NODShiLtJ_T0042565.1 MGP_NODShiLtJ_G0022271.1 mouse_genomes_project 15 116847287 116869415 - MGP_NODShiLtJ_P0042565 Itga5 protein_coding protein_coding MGP_NODShiLtJ_T0098912.1 MGP_NODShiLtJ_G0037306.1 mouse_genomes_project 15 91243344 91243451 - Gm24204 snRNA snRNA MGP_NODShiLtJ_T0040459.1 MGP_NODShiLtJ_G0021608.1 mouse_genomes_project 15 35549740 35550746 + MGP_NODShiLtJ_P0040459 Tas2r119 protein_coding protein_coding MGP_NODShiLtJ_T0040406.1 MGP_NODShiLtJ_G0021587.1 mouse_genomes_project 15 27844990 27899594 - MGP_NODShiLtJ_P0040406 Basp1 protein_coding protein_coding MGP_NODShiLtJ_T0041326.1 MGP_NODShiLtJ_G0021886.1 mouse_genomes_project 15 89957313 89979618 + Sh3bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0041327.1 MGP_NODShiLtJ_G0021886.1 mouse_genomes_project 15 89957413 89970711 + MGP_NODShiLtJ_P0041327 Sh3bp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041328.1 MGP_NODShiLtJ_G0021886.1 mouse_genomes_project 15 89957413 89970711 + MGP_NODShiLtJ_P0041328 Sh3bp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041329.1 MGP_NODShiLtJ_G0021886.1 mouse_genomes_project 15 89957413 89970707 + MGP_NODShiLtJ_P0041329 Sh3bp1 protein_coding protein_coding MGP_NODShiLtJ_T0041330.1 MGP_NODShiLtJ_G0021886.1 mouse_genomes_project 15 89957413 89970711 + MGP_NODShiLtJ_P0041330 Sh3bp1 protein_coding protein_coding MGP_NODShiLtJ_T0041331.1 MGP_NODShiLtJ_G0021886.1 mouse_genomes_project 15 89957413 89970711 + MGP_NODShiLtJ_P0041331 Sh3bp1 protein_coding protein_coding MGP_NODShiLtJ_T0041332.1 MGP_NODShiLtJ_G0021886.1 mouse_genomes_project 15 89972578 89980103 + MGP_NODShiLtJ_P0041332 Sh3bp1 protein_coding protein_coding MGP_NODShiLtJ_T0042338.1 MGP_NODShiLtJ_G0022191.1 mouse_genomes_project 15 113887692 113904185 - MGP_NODShiLtJ_P0042338 Cela1 protein_coding protein_coding MGP_NODShiLtJ_T0042448.1 MGP_NODShiLtJ_G0022239.1 mouse_genomes_project 15 115752223 115757459 + Pfdn5 protein_coding retained_intron MGP_NODShiLtJ_T0042449.1 MGP_NODShiLtJ_G0022239.1 mouse_genomes_project 15 115752244 115757400 + MGP_NODShiLtJ_P0042449 Pfdn5 protein_coding protein_coding MGP_NODShiLtJ_T0042450.1 MGP_NODShiLtJ_G0022239.1 mouse_genomes_project 15 115752244 115757537 + MGP_NODShiLtJ_P0042450 Pfdn5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042451.1 MGP_NODShiLtJ_G0022239.1 mouse_genomes_project 15 115752244 115757400 + MGP_NODShiLtJ_P0042451 Pfdn5 protein_coding protein_coding MGP_NODShiLtJ_T0042452.1 MGP_NODShiLtJ_G0022239.1 mouse_genomes_project 15 115752446 115757513 + MGP_NODShiLtJ_P0042452 Pfdn5 protein_coding protein_coding MGP_NODShiLtJ_T0011276.1 MGP_NODShiLtJ_G0009409.1 mouse_genomes_project 15 67148754 67149055 + Gm23789 misc_RNA misc_RNA MGP_NODShiLtJ_T0041275.1 MGP_NODShiLtJ_G0021864.1 mouse_genomes_project 15 88858176 88878782 - MGP_NODShiLtJ_P0041275 Foxred2 protein_coding protein_coding MGP_NODShiLtJ_T0041276.1 MGP_NODShiLtJ_G0021864.1 mouse_genomes_project 15 88858180 88863543 - Foxred2 protein_coding retained_intron MGP_NODShiLtJ_T0041277.1 MGP_NODShiLtJ_G0021864.1 mouse_genomes_project 15 88858673 88878735 - MGP_NODShiLtJ_P0041277 Foxred2 protein_coding protein_coding MGP_NODShiLtJ_T0041278.1 MGP_NODShiLtJ_G0021864.1 mouse_genomes_project 15 88874244 88878743 - Foxred2 protein_coding retained_intron MGP_NODShiLtJ_T0041312.1 MGP_NODShiLtJ_G0021877.1 mouse_genomes_project 15 89554682 89561998 - MGP_NODShiLtJ_P0041312 Sstr3 protein_coding protein_coding MGP_NODShiLtJ_T0098916.1 MGP_NODShiLtJ_G0037310.1 mouse_genomes_project 15 97134265 97134457 - Gm23517 snRNA snRNA MGP_NODShiLtJ_T0041984.1 MGP_NODShiLtJ_G0022076.1 mouse_genomes_project 15 103543218 103883310 - MGP_NODShiLtJ_P0041984 Slc2a13 protein_coding protein_coding MGP_NODShiLtJ_T0041985.1 MGP_NODShiLtJ_G0022076.1 mouse_genomes_project 15 103682753 103698519 - Slc2a13 protein_coding processed_transcript MGP_NODShiLtJ_T0041986.1 MGP_NODShiLtJ_G0022076.1 mouse_genomes_project 15 103852307 103883243 - Slc2a13 protein_coding processed_transcript MGP_NODShiLtJ_T0041802.1 MGP_NODShiLtJ_G0022026.1 mouse_genomes_project 15 97683633 97700605 + MGP_NODShiLtJ_P0041802 Gtse1 protein_coding protein_coding MGP_NODShiLtJ_T0041351.1 MGP_NODShiLtJ_G0021892.1 mouse_genomes_project 15 90127621 90137406 - MGP_NODShiLtJ_P0041351 Ankrd54 protein_coding protein_coding MGP_NODShiLtJ_T0041352.1 MGP_NODShiLtJ_G0021892.1 mouse_genomes_project 15 90127631 90137406 - Ankrd54 protein_coding retained_intron MGP_NODShiLtJ_T0041353.1 MGP_NODShiLtJ_G0021892.1 mouse_genomes_project 15 90128101 90129941 - MGP_NODShiLtJ_P0041353 Ankrd54 protein_coding protein_coding MGP_NODShiLtJ_T0041354.1 MGP_NODShiLtJ_G0021892.1 mouse_genomes_project 15 90128295 90129872 - MGP_NODShiLtJ_P0041354 Ankrd54 protein_coding protein_coding MGP_NODShiLtJ_T0041355.1 MGP_NODShiLtJ_G0021892.1 mouse_genomes_project 15 90129913 90137403 - MGP_NODShiLtJ_P0041355 Ankrd54 protein_coding protein_coding MGP_NODShiLtJ_T0041356.1 MGP_NODShiLtJ_G0021892.1 mouse_genomes_project 15 90129942 90137357 - MGP_NODShiLtJ_P0041356 Ankrd54 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041357.1 MGP_NODShiLtJ_G0021892.1 mouse_genomes_project 15 90134146 90137414 - Ankrd54 protein_coding retained_intron MGP_NODShiLtJ_T0041649.1 MGP_NODShiLtJ_G0021968.1 mouse_genomes_project 15 93614646 93635275 + MGP_NODShiLtJ_P0041649 Sept3 protein_coding protein_coding MGP_NODShiLtJ_T0041650.1 MGP_NODShiLtJ_G0021968.1 mouse_genomes_project 15 93614958 93632891 + MGP_NODShiLtJ_P0041650 Sept3 protein_coding protein_coding MGP_NODShiLtJ_T0009974.1 MGP_NODShiLtJ_G0008107.1 mouse_genomes_project 15 92154481 92154563 + Mir5113 miRNA miRNA MGP_NODShiLtJ_T0040352.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10194540 10279072 + MGP_NODShiLtJ_P0040352 Zfr protein_coding protein_coding MGP_NODShiLtJ_T0040353.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10194560 10236319 + MGP_NODShiLtJ_P0040353 Zfr protein_coding protein_coding MGP_NODShiLtJ_T0040354.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10194568 10223273 + MGP_NODShiLtJ_P0040354 Zfr protein_coding protein_coding MGP_NODShiLtJ_T0040355.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10194575 10202360 + Zfr protein_coding processed_transcript MGP_NODShiLtJ_T0040356.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10250998 10257604 + MGP_NODShiLtJ_P0040356 Zfr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040357.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10251919 10277301 + MGP_NODShiLtJ_P0040357 Zfr protein_coding protein_coding MGP_NODShiLtJ_T0040358.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10257542 10277851 + MGP_NODShiLtJ_P0040358 Zfr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040359.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10262164 10263675 + Zfr protein_coding retained_intron MGP_NODShiLtJ_T0040360.1 MGP_NODShiLtJ_G0021573.1 mouse_genomes_project 15 10272966 10277851 + Zfr protein_coding processed_transcript MGP_NODShiLtJ_T0041113.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120008 87123080 + MGP_NODShiLtJ_P0041113 Maf1 protein_coding protein_coding MGP_NODShiLtJ_T0041114.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120008 87123081 + MGP_NODShiLtJ_P0041114 Maf1 protein_coding protein_coding MGP_NODShiLtJ_T0041115.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120020 87123081 + MGP_NODShiLtJ_P0041115 Maf1 protein_coding protein_coding MGP_NODShiLtJ_T0041116.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120023 87121714 + Maf1 protein_coding retained_intron MGP_NODShiLtJ_T0041117.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120041 87121155 + Maf1 protein_coding processed_transcript MGP_NODShiLtJ_T0041118.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120041 87123088 + MGP_NODShiLtJ_P0041118 Maf1 protein_coding protein_coding MGP_NODShiLtJ_T0041119.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120067 87120775 + Maf1 protein_coding retained_intron MGP_NODShiLtJ_T0041120.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120123 87121607 + Maf1 protein_coding retained_intron MGP_NODShiLtJ_T0041121.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120713 87121894 + MGP_NODShiLtJ_P0041121 Maf1 protein_coding protein_coding MGP_NODShiLtJ_T0041122.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87120741 87121608 + Maf1 protein_coding retained_intron MGP_NODShiLtJ_T0041123.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87121477 87122699 + Maf1 protein_coding retained_intron MGP_NODShiLtJ_T0041124.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87121601 87122734 + Maf1 protein_coding retained_intron MGP_NODShiLtJ_T0041125.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87121808 87122781 + Maf1 protein_coding retained_intron MGP_NODShiLtJ_T0041126.1 MGP_NODShiLtJ_G0021823.1 mouse_genomes_project 15 87122122 87122823 + MGP_NODShiLtJ_P0041126 Maf1 protein_coding protein_coding MGP_NODShiLtJ_T0010001.1 MGP_NODShiLtJ_G0008134.1 mouse_genomes_project 15 114920819 114920948 + Gm44460 miRNA miRNA MGP_NODShiLtJ_T0042418.1 MGP_NODShiLtJ_G0022228.1 mouse_genomes_project 15 115478272 115501587 + MGP_NODShiLtJ_P0042418 Eif4b protein_coding protein_coding MGP_NODShiLtJ_T0041324.1 MGP_NODShiLtJ_G0021884.1 mouse_genomes_project 15 89905414 89912466 - MGP_NODShiLtJ_P0041324 Lgals2 protein_coding protein_coding MGP_NODShiLtJ_T0011285.1 MGP_NODShiLtJ_G0009418.1 mouse_genomes_project 15 105774140 105774478 + Gm24447 misc_RNA misc_RNA MGP_NODShiLtJ_T0040812.1 MGP_NODShiLtJ_G0021742.1 mouse_genomes_project 15 76144046 76335298 + MGP_NODShiLtJ_P0040812 Tg protein_coding protein_coding MGP_NODShiLtJ_T0040813.1 MGP_NODShiLtJ_G0021742.1 mouse_genomes_project 15 76162892 76335184 + MGP_NODShiLtJ_P0040813 Tg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040814.1 MGP_NODShiLtJ_G0021742.1 mouse_genomes_project 15 76177040 76190944 + Tg protein_coding processed_transcript MGP_NODShiLtJ_T0040815.1 MGP_NODShiLtJ_G0021742.1 mouse_genomes_project 15 76181036 76335184 + MGP_NODShiLtJ_P0040815 Tg protein_coding protein_coding MGP_NODShiLtJ_T0040816.1 MGP_NODShiLtJ_G0021742.1 mouse_genomes_project 15 76191697 76201056 + Tg protein_coding processed_transcript MGP_NODShiLtJ_T0040817.1 MGP_NODShiLtJ_G0021742.1 mouse_genomes_project 15 76192339 76205438 + Tg protein_coding processed_transcript MGP_NODShiLtJ_T0040818.1 MGP_NODShiLtJ_G0021742.1 mouse_genomes_project 15 76213585 76335298 + MGP_NODShiLtJ_P0040818 Tg protein_coding protein_coding MGP_NODShiLtJ_T0040824.1 MGP_NODShiLtJ_G0021742.1 mouse_genomes_project 15 76278755 76335298 + Tg protein_coding processed_transcript MGP_NODShiLtJ_T0098893.1 MGP_NODShiLtJ_G0037287.1 mouse_genomes_project 15 55415601 55415734 + Gm25007 snRNA snRNA MGP_NODShiLtJ_T0098908.1 MGP_NODShiLtJ_G0037302.1 mouse_genomes_project 15 86745637 86745795 + Gm23027 snRNA snRNA MGP_NODShiLtJ_T0098923.1 MGP_NODShiLtJ_G0037317.1 mouse_genomes_project 15 109506367 109506475 + Gm22045 snRNA snRNA MGP_NODShiLtJ_T0100154.1 MGP_NODShiLtJ_G0038548.1 mouse_genomes_project 15 33134653 33134726 - Gm24554 snoRNA snoRNA MGP_NODShiLtJ_T0041193.1 MGP_NODShiLtJ_G0021840.1 mouse_genomes_project 15 87474391 87481711 + MGP_NODShiLtJ_P0041193 Kifc2 protein_coding protein_coding MGP_NODShiLtJ_T0041838.1 MGP_NODShiLtJ_G0022039.1 mouse_genomes_project 15 100925751 100996661 - MGP_NODShiLtJ_P0041838 Ttll8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041839.1 MGP_NODShiLtJ_G0022039.1 mouse_genomes_project 15 100951601 100996653 - MGP_NODShiLtJ_P0041839 Ttll8 protein_coding protein_coding MGP_NODShiLtJ_T0041840.1 MGP_NODShiLtJ_G0022039.1 mouse_genomes_project 15 100951657 100996302 - MGP_NODShiLtJ_P0041840 Ttll8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041841.1 MGP_NODShiLtJ_G0022039.1 mouse_genomes_project 15 100953372 100957582 - Ttll8 protein_coding retained_intron MGP_NODShiLtJ_T0100152.1 MGP_NODShiLtJ_G0038546.1 mouse_genomes_project 15 29683588 29683719 - Gm23903 snoRNA snoRNA MGP_NODShiLtJ_T0012980.1 MGP_NODShiLtJ_G0011088.1 mouse_genomes_project 15 96882272 96882690 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041713.1 MGP_NODShiLtJ_G0021995.1 mouse_genomes_project 15 95189116 95202709 + MGP_NODShiLtJ_P0041713 Tspo protein_coding protein_coding MGP_NODShiLtJ_T0041902.1 MGP_NODShiLtJ_G0022053.1 mouse_genomes_project 15 101378777 101380534 + MGP_NODShiLtJ_P0041902 Adm2 protein_coding protein_coding MGP_NODShiLtJ_T0006741.1 MGP_NODShiLtJ_G0005551.1 mouse_genomes_project 15 108921118 109074843 - 2610037D02Rik lincRNA lincRNA MGP_NODShiLtJ_T0006745.1 MGP_NODShiLtJ_G0005551.1 mouse_genomes_project 15 109072733 109075730 - 2610037D02Rik lincRNA lincRNA MGP_NODShiLtJ_T0040187.1 MGP_NODShiLtJ_G0021524.1 mouse_genomes_project 15 971126 984868 - MGP_NODShiLtJ_P0040187 AW549877 protein_coding protein_coding MGP_NODShiLtJ_T0041887.1 MGP_NODShiLtJ_G0022051.1 mouse_genomes_project 15 101261751 101339160 + MGP_NODShiLtJ_P0041887 Ppp6r2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041888.1 MGP_NODShiLtJ_G0022051.1 mouse_genomes_project 15 101306486 101339275 + MGP_NODShiLtJ_P0041888 Ppp6r2 protein_coding protein_coding MGP_NODShiLtJ_T0041409.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90517061 90541130 - MGP_NODShiLtJ_P0041409 Csnk1e protein_coding protein_coding MGP_NODShiLtJ_T0041410.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90518332 90520499 - Csnk1e protein_coding retained_intron MGP_NODShiLtJ_T0041411.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90518351 90541133 - MGP_NODShiLtJ_P0041411 Csnk1e protein_coding protein_coding MGP_NODShiLtJ_T0041412.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90521670 90540939 - MGP_NODShiLtJ_P0041412 Csnk1e protein_coding protein_coding MGP_NODShiLtJ_T0041413.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90522832 90523488 - Csnk1e protein_coding retained_intron MGP_NODShiLtJ_T0041414.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90523354 90524748 - Csnk1e protein_coding retained_intron MGP_NODShiLtJ_T0041415.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90523926 90525633 - Csnk1e protein_coding retained_intron MGP_NODShiLtJ_T0041416.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90524044 90529049 - Csnk1e protein_coding retained_intron MGP_NODShiLtJ_T0041417.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90525587 90538142 - MGP_NODShiLtJ_P0041417 Csnk1e protein_coding protein_coding MGP_NODShiLtJ_T0041418.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90525656 90540939 - MGP_NODShiLtJ_P0041418 Csnk1e protein_coding protein_coding MGP_NODShiLtJ_T0041419.1 MGP_NODShiLtJ_G0021904.1 mouse_genomes_project 15 90529228 90543051 - MGP_NODShiLtJ_P0041419 Csnk1e protein_coding protein_coding MGP_NODShiLtJ_T0041459.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91031358 91046490 + MGP_NODShiLtJ_P0041459 Apobec3 protein_coding protein_coding MGP_NODShiLtJ_T0041460.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91031393 91046543 + MGP_NODShiLtJ_P0041460 Apobec3 protein_coding protein_coding MGP_NODShiLtJ_T0041461.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91031748 91038161 + Apobec3 protein_coding processed_transcript MGP_NODShiLtJ_T0041462.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91032105 91049377 + MGP_NODShiLtJ_P0041462 Apobec3 protein_coding protein_coding MGP_NODShiLtJ_T0041463.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91032108 91046435 + MGP_NODShiLtJ_P0041463 Apobec3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041464.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91032139 91048316 + MGP_NODShiLtJ_P0041464 Apobec3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041465.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91032145 91049036 + MGP_NODShiLtJ_P0041465 Apobec3 protein_coding protein_coding MGP_NODShiLtJ_T0041466.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91032146 91049384 + MGP_NODShiLtJ_P0041466 Apobec3 protein_coding protein_coding MGP_NODShiLtJ_T0041467.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91032152 91056557 + MGP_NODShiLtJ_P0041467 Apobec3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041468.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91032181 91048316 + MGP_NODShiLtJ_P0041468 Apobec3 protein_coding protein_coding MGP_NODShiLtJ_T0041469.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91034753 91038582 + MGP_NODShiLtJ_P0041469 Apobec3 protein_coding protein_coding MGP_NODShiLtJ_T0041470.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91038219 91046853 + Apobec3 protein_coding retained_intron MGP_NODShiLtJ_T0041471.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91041205 91048871 + Apobec3 protein_coding retained_intron MGP_NODShiLtJ_T0041472.1 MGP_NODShiLtJ_G0021919.1 mouse_genomes_project 15 91047057 91048024 + Apobec3 protein_coding retained_intron MGP_NODShiLtJ_T0003585.1 MGP_NODShiLtJ_G0003243.1 mouse_genomes_project 15 113794762 113796593 + Gm27209 antisense antisense MGP_NODShiLtJ_T0042195.1 MGP_NODShiLtJ_G0022144.1 mouse_genomes_project 15 111941867 111947379 - MGP_NODShiLtJ_P0042195 Dhh protein_coding protein_coding MGP_NODShiLtJ_T0006753.1 MGP_NODShiLtJ_G0005559.1 mouse_genomes_project 15 115687776 115691336 + lincRNA lincRNA MGP_NODShiLtJ_T0042404.1 MGP_NODShiLtJ_G0022215.1 mouse_genomes_project 15 115107660 115116828 - MGP_NODShiLtJ_P0042404 Krt71 protein_coding protein_coding MGP_NODShiLtJ_T0040720.1 MGP_NODShiLtJ_G0021706.1 mouse_genomes_project 15 66720358 66760898 - MGP_NODShiLtJ_P0040720 Fbxo32 protein_coding protein_coding MGP_NODShiLtJ_T0040462.1 MGP_NODShiLtJ_G0021611.1 mouse_genomes_project 15 36557829 37173297 + MGP_NODShiLtJ_P0040462 Cpq protein_coding protein_coding MGP_NODShiLtJ_T0101664.1 MGP_NODShiLtJ_G0039833.1 mouse_genomes_project 15 85895908 85899547 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098907.1 MGP_NODShiLtJ_G0037301.1 mouse_genomes_project 15 84124312 84124439 + Gm22106 snRNA snRNA MGP_NODShiLtJ_T0040298.1 MGP_NODShiLtJ_G0021555.1 mouse_genomes_project 15 7217985 7252275 - MGP_NODShiLtJ_P0040298 Il7r protein_coding protein_coding MGP_NODShiLtJ_T0041423.1 MGP_NODShiLtJ_G0021908.1 mouse_genomes_project 15 90670267 90723212 - MGP_NODShiLtJ_P0041423 Dmc1 protein_coding protein_coding MGP_NODShiLtJ_T0041760.1 MGP_NODShiLtJ_G0022009.1 mouse_genomes_project 15 96455295 96494063 + Arhgap8 protein_coding retained_intron MGP_NODShiLtJ_T0041761.1 MGP_NODShiLtJ_G0022009.1 mouse_genomes_project 15 96455663 96506935 + MGP_NODShiLtJ_P0041761 Arhgap8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041762.1 MGP_NODShiLtJ_G0022009.1 mouse_genomes_project 15 96478732 96500903 + Arhgap8 protein_coding processed_transcript MGP_NODShiLtJ_T0041763.1 MGP_NODShiLtJ_G0022009.1 mouse_genomes_project 15 96504743 96506798 + Arhgap8 protein_coding retained_intron MGP_NODShiLtJ_T0041831.1 MGP_NODShiLtJ_G0022035.1 mouse_genomes_project 15 100768582 100793428 + protein_coding processed_transcript MGP_NODShiLtJ_T0042313.1 MGP_NODShiLtJ_G0022183.1 mouse_genomes_project 15 113594807 113600125 + MGP_NODShiLtJ_P0042313 Gm5475 protein_coding protein_coding MGP_NODShiLtJ_T0042314.1 MGP_NODShiLtJ_G0022183.1 mouse_genomes_project 15 113595853 113600800 + MGP_NODShiLtJ_P0042314 Gm5475 protein_coding protein_coding MGP_NODShiLtJ_T0042152.1 MGP_NODShiLtJ_G0022128.1 mouse_genomes_project 15 111516676 111532303 - MGP_NODShiLtJ_P0042152 Kansl2 protein_coding protein_coding MGP_NODShiLtJ_T0042153.1 MGP_NODShiLtJ_G0022128.1 mouse_genomes_project 15 111516956 111532280 - MGP_NODShiLtJ_P0042153 Kansl2 protein_coding protein_coding MGP_NODShiLtJ_T0041688.1 MGP_NODShiLtJ_G0021986.1 mouse_genomes_project 15 94687519 94693225 - MGP_NODShiLtJ_P0041688 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041689.1 MGP_NODShiLtJ_G0021986.1 mouse_genomes_project 15 94687859 94688980 - protein_coding retained_intron MGP_NODShiLtJ_T0041690.1 MGP_NODShiLtJ_G0021986.1 mouse_genomes_project 15 94690131 94699745 - MGP_NODShiLtJ_P0041690 protein_coding protein_coding MGP_NODShiLtJ_T0041691.1 MGP_NODShiLtJ_G0021986.1 mouse_genomes_project 15 94690157 94693242 - MGP_NODShiLtJ_P0041691 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0009961.1 MGP_NODShiLtJ_G0008094.1 mouse_genomes_project 15 86774089 86774150 - Mir6952 miRNA miRNA MGP_NODShiLtJ_T0041177.1 MGP_NODShiLtJ_G0021836.1 mouse_genomes_project 15 87400723 87413748 - MGP_NODShiLtJ_P0041177 Cpsf1 protein_coding protein_coding MGP_NODShiLtJ_T0040554.1 MGP_NODShiLtJ_G0021640.1 mouse_genomes_project 15 42059186 42100066 - MGP_NODShiLtJ_P0040554 Rrm2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040555.1 MGP_NODShiLtJ_G0021640.1 mouse_genomes_project 15 42059186 42100066 - MGP_NODShiLtJ_P0040555 Rrm2b protein_coding protein_coding MGP_NODShiLtJ_T0040556.1 MGP_NODShiLtJ_G0021640.1 mouse_genomes_project 15 42059186 42100066 - MGP_NODShiLtJ_P0040556 Rrm2b protein_coding protein_coding MGP_NODShiLtJ_T0040557.1 MGP_NODShiLtJ_G0021640.1 mouse_genomes_project 15 42059186 42100066 - MGP_NODShiLtJ_P0040557 Rrm2b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040558.1 MGP_NODShiLtJ_G0021640.1 mouse_genomes_project 15 42063473 42100104 - MGP_NODShiLtJ_P0040558 Rrm2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040559.1 MGP_NODShiLtJ_G0021640.1 mouse_genomes_project 15 42081100 42092180 - Rrm2b protein_coding retained_intron MGP_NODShiLtJ_T0040560.1 MGP_NODShiLtJ_G0021640.1 mouse_genomes_project 15 42081205 42100024 - MGP_NODShiLtJ_P0040560 Rrm2b protein_coding protein_coding MGP_NODShiLtJ_T0040561.1 MGP_NODShiLtJ_G0021640.1 mouse_genomes_project 15 42082804 42100527 - MGP_NODShiLtJ_P0040561 Rrm2b protein_coding protein_coding MGP_NODShiLtJ_T0006707.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 70923918 71158680 + lincRNA lincRNA MGP_NODShiLtJ_T0006708.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 70923970 71170537 + lincRNA lincRNA MGP_NODShiLtJ_T0006709.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 70923979 71158676 + lincRNA lincRNA MGP_NODShiLtJ_T0006710.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 70923982 71297902 + lincRNA lincRNA MGP_NODShiLtJ_T0006711.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 70923993 71160125 + lincRNA lincRNA MGP_NODShiLtJ_T0006712.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 70925189 71158375 + lincRNA lincRNA MGP_NODShiLtJ_T0006713.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 71000109 71008558 + lincRNA lincRNA MGP_NODShiLtJ_T0006714.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 71088288 71160127 + lincRNA lincRNA MGP_NODShiLtJ_T0006715.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 71129655 71158678 + lincRNA lincRNA MGP_NODShiLtJ_T0006716.1 MGP_NODShiLtJ_G0005532.1 mouse_genomes_project 15 71134035 71151657 + lincRNA lincRNA MGP_NODShiLtJ_T0041222.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87557017 87655186 - MGP_NODShiLtJ_P0041222 Arhgap39 protein_coding protein_coding MGP_NODShiLtJ_T0041223.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87557017 87655273 - MGP_NODShiLtJ_P0041223 Arhgap39 protein_coding protein_coding MGP_NODShiLtJ_T0041224.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87557892 87558636 - Arhgap39 protein_coding retained_intron MGP_NODShiLtJ_T0041225.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87566455 87655232 - Arhgap39 protein_coding retained_intron MGP_NODShiLtJ_T0041226.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87584615 87626431 - MGP_NODShiLtJ_P0041226 Arhgap39 protein_coding protein_coding MGP_NODShiLtJ_T0041227.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87590977 87655209 - MGP_NODShiLtJ_P0041227 Arhgap39 protein_coding protein_coding MGP_NODShiLtJ_T0041228.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87590981 87655099 - MGP_NODShiLtJ_P0041228 Arhgap39 protein_coding protein_coding MGP_NODShiLtJ_T0041229.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87597884 87655244 - Arhgap39 protein_coding retained_intron MGP_NODShiLtJ_T0041230.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87598333 87655073 - MGP_NODShiLtJ_P0041230 Arhgap39 protein_coding protein_coding MGP_NODShiLtJ_T0041231.1 MGP_NODShiLtJ_G0021848.1 mouse_genomes_project 15 87598349 87655179 - MGP_NODShiLtJ_P0041231 Arhgap39 protein_coding protein_coding MGP_NODShiLtJ_T0040497.1 MGP_NODShiLtJ_G0021623.1 mouse_genomes_project 15 38571163 38877851 - MGP_NODShiLtJ_P0040497 Stk3 protein_coding protein_coding MGP_NODShiLtJ_T0040498.1 MGP_NODShiLtJ_G0021623.1 mouse_genomes_project 15 38571350 38877795 - MGP_NODShiLtJ_P0040498 Stk3 protein_coding protein_coding MGP_NODShiLtJ_T0040499.1 MGP_NODShiLtJ_G0021623.1 mouse_genomes_project 15 38653037 38694188 - Stk3 protein_coding retained_intron MGP_NODShiLtJ_T0040500.1 MGP_NODShiLtJ_G0021623.1 mouse_genomes_project 15 38783397 38877714 - MGP_NODShiLtJ_P0040500 Stk3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042415.1 MGP_NODShiLtJ_G0022225.1 mouse_genomes_project 15 115328703 115336452 - MGP_NODShiLtJ_P0042415 protein_coding protein_coding MGP_NODShiLtJ_T0041041.1 MGP_NODShiLtJ_G0021810.1 mouse_genomes_project 15 86779445 86790205 - MGP_NODShiLtJ_P0041041 Puf60 protein_coding protein_coding MGP_NODShiLtJ_T0041042.1 MGP_NODShiLtJ_G0021810.1 mouse_genomes_project 15 86779445 86790205 - MGP_NODShiLtJ_P0041042 Puf60 protein_coding protein_coding MGP_NODShiLtJ_T0042419.1 MGP_NODShiLtJ_G0022229.1 mouse_genomes_project 15 115508396 115521810 + MGP_NODShiLtJ_P0042419 Tns2 protein_coding protein_coding MGP_NODShiLtJ_T0042420.1 MGP_NODShiLtJ_G0022229.1 mouse_genomes_project 15 115508396 115521800 + MGP_NODShiLtJ_P0042420 Tns2 protein_coding protein_coding MGP_NODShiLtJ_T0040541.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41446793 41915084 - MGP_NODShiLtJ_P0040541 Ncald protein_coding protein_coding MGP_NODShiLtJ_T0040542.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41446793 41915517 - MGP_NODShiLtJ_P0040542 Ncald protein_coding protein_coding MGP_NODShiLtJ_T0040543.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41446836 41556113 - MGP_NODShiLtJ_P0040543 Ncald protein_coding protein_coding MGP_NODShiLtJ_T0040544.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41446885 41556102 - MGP_NODShiLtJ_P0040544 Ncald protein_coding protein_coding MGP_NODShiLtJ_T0040545.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41449251 41555291 - MGP_NODShiLtJ_P0040545 Ncald protein_coding protein_coding MGP_NODShiLtJ_T0040546.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41449515 41846671 - MGP_NODShiLtJ_P0040546 Ncald protein_coding protein_coding MGP_NODShiLtJ_T0040547.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41452746 41915084 - MGP_NODShiLtJ_P0040547 Ncald protein_coding protein_coding MGP_NODShiLtJ_T0040548.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41463171 41556085 - Ncald protein_coding processed_transcript MGP_NODShiLtJ_T0040549.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41488357 41915654 - MGP_NODShiLtJ_P0040549 Ncald protein_coding protein_coding MGP_NODShiLtJ_T0040551.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41527906 41846372 - Ncald protein_coding processed_transcript MGP_NODShiLtJ_T0040552.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41728906 41846671 - Ncald protein_coding processed_transcript MGP_NODShiLtJ_T0040553.1 MGP_NODShiLtJ_G0021638.1 mouse_genomes_project 15 41730273 41915323 - Ncald protein_coding processed_transcript MGP_NODShiLtJ_T0042532.1 MGP_NODShiLtJ_G0022257.1 mouse_genomes_project 15 116433794 116437077 + MGP_NODShiLtJ_P0042532 Hoxc11 protein_coding protein_coding MGP_NODShiLtJ_T0041017.1 MGP_NODShiLtJ_G0021804.1 mouse_genomes_project 15 86673739 86680431 + Zfp707 protein_coding retained_intron MGP_NODShiLtJ_T0041018.1 MGP_NODShiLtJ_G0021804.1 mouse_genomes_project 15 86673878 86680319 + MGP_NODShiLtJ_P0041018 Zfp707 protein_coding protein_coding MGP_NODShiLtJ_T0041019.1 MGP_NODShiLtJ_G0021804.1 mouse_genomes_project 15 86673888 86680307 + MGP_NODShiLtJ_P0041019 Zfp707 protein_coding protein_coding MGP_NODShiLtJ_T0041020.1 MGP_NODShiLtJ_G0021804.1 mouse_genomes_project 15 86674257 86679328 + MGP_NODShiLtJ_P0041020 Zfp707 protein_coding protein_coding MGP_NODShiLtJ_T0041021.1 MGP_NODShiLtJ_G0021804.1 mouse_genomes_project 15 86677345 86678513 + Zfp707 protein_coding retained_intron MGP_NODShiLtJ_T0042300.1 MGP_NODShiLtJ_G0022179.1 mouse_genomes_project 15 113517200 113527055 + MGP_NODShiLtJ_P0042300 protein_coding protein_coding MGP_NODShiLtJ_T0097948.1 MGP_NODShiLtJ_G0036360.1 mouse_genomes_project 15 11122722 11122822 + Gm24664 rRNA rRNA MGP_NODShiLtJ_T0041435.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90855713 90874935 - Sun2 protein_coding retained_intron MGP_NODShiLtJ_T0041436.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90855713 90875013 - MGP_NODShiLtJ_P0041436 Sun2 protein_coding protein_coding MGP_NODShiLtJ_T0041437.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90855714 90874983 - MGP_NODShiLtJ_P0041437 Sun2 protein_coding protein_coding MGP_NODShiLtJ_T0041438.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90855716 90875015 - MGP_NODShiLtJ_P0041438 Sun2 protein_coding protein_coding MGP_NODShiLtJ_T0041439.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90861257 90874983 - Sun2 protein_coding retained_intron MGP_NODShiLtJ_T0041440.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90865147 90866991 - Sun2 protein_coding retained_intron MGP_NODShiLtJ_T0041441.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90871128 90874594 - MGP_NODShiLtJ_P0041441 Sun2 protein_coding protein_coding MGP_NODShiLtJ_T0041442.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90872210 90874582 - MGP_NODShiLtJ_P0041442 Sun2 protein_coding protein_coding MGP_NODShiLtJ_T0041443.1 MGP_NODShiLtJ_G0021914.1 mouse_genomes_project 15 90872317 90874571 - MGP_NODShiLtJ_P0041443 Sun2 protein_coding protein_coding MGP_NODShiLtJ_T0009937.1 MGP_NODShiLtJ_G0008070.1 mouse_genomes_project 15 10263380 10263463 + Mir1898 miRNA miRNA MGP_NODShiLtJ_T0040810.1 MGP_NODShiLtJ_G0021740.1 mouse_genomes_project 15 75969894 76008356 - MGP_NODShiLtJ_P0040810 Tmem71 protein_coding protein_coding MGP_NODShiLtJ_T0041944.1 MGP_NODShiLtJ_G0022064.1 mouse_genomes_project 15 101504540 101505820 + MGP_NODShiLtJ_P0041944 C730034F03Rik protein_coding protein_coding MGP_NODShiLtJ_T0041613.1 MGP_NODShiLtJ_G0021957.1 mouse_genomes_project 15 93257420 93267252 - MGP_NODShiLtJ_P0041613 Pmm1 protein_coding protein_coding MGP_NODShiLtJ_T0041614.1 MGP_NODShiLtJ_G0021957.1 mouse_genomes_project 15 93257420 93267191 - MGP_NODShiLtJ_P0041614 Pmm1 protein_coding protein_coding MGP_NODShiLtJ_T0041615.1 MGP_NODShiLtJ_G0021957.1 mouse_genomes_project 15 93257714 93259821 - Pmm1 protein_coding retained_intron MGP_NODShiLtJ_T0041616.1 MGP_NODShiLtJ_G0021957.1 mouse_genomes_project 15 93257756 93267164 - MGP_NODShiLtJ_P0041616 Pmm1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041617.1 MGP_NODShiLtJ_G0021957.1 mouse_genomes_project 15 93257859 93258581 - Pmm1 protein_coding retained_intron MGP_NODShiLtJ_T0041618.1 MGP_NODShiLtJ_G0021957.1 mouse_genomes_project 15 93261866 93267155 - Pmm1 protein_coding retained_intron MGP_NODShiLtJ_T0041619.1 MGP_NODShiLtJ_G0021957.1 mouse_genomes_project 15 93263656 93267086 - Pmm1 protein_coding retained_intron MGP_NODShiLtJ_T0040659.1 MGP_NODShiLtJ_G0021687.1 mouse_genomes_project 15 63262397 63328478 - MGP_NODShiLtJ_P0040659 Taf2 protein_coding protein_coding MGP_NODShiLtJ_T0010009.1 MGP_NODShiLtJ_G0008142.1 mouse_genomes_project 15 116853433 116853504 - Mir6963 miRNA miRNA MGP_NODShiLtJ_T0042229.1 MGP_NODShiLtJ_G0022157.1 mouse_genomes_project 15 112418313 112471622 - MGP_NODShiLtJ_P0042229 Fmnl3 protein_coding protein_coding MGP_NODShiLtJ_T0042230.1 MGP_NODShiLtJ_G0022157.1 mouse_genomes_project 15 112418313 112471589 - MGP_NODShiLtJ_P0042230 Fmnl3 protein_coding protein_coding MGP_NODShiLtJ_T0042231.1 MGP_NODShiLtJ_G0022157.1 mouse_genomes_project 15 112418313 112471589 - MGP_NODShiLtJ_P0042231 Fmnl3 protein_coding protein_coding MGP_NODShiLtJ_T0042232.1 MGP_NODShiLtJ_G0022157.1 mouse_genomes_project 15 112425474 112426742 - Fmnl3 protein_coding retained_intron MGP_NODShiLtJ_T0042233.1 MGP_NODShiLtJ_G0022157.1 mouse_genomes_project 15 112428961 112436845 - Fmnl3 protein_coding processed_transcript MGP_NODShiLtJ_T0012940.1 MGP_NODShiLtJ_G0011048.1 mouse_genomes_project 15 11645447 11647174 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041825.1 MGP_NODShiLtJ_G0022034.1 mouse_genomes_project 15 100695791 100749546 - MGP_NODShiLtJ_P0041825 Brd1 protein_coding protein_coding MGP_NODShiLtJ_T0041826.1 MGP_NODShiLtJ_G0022034.1 mouse_genomes_project 15 100696787 100746333 - MGP_NODShiLtJ_P0041826 Brd1 protein_coding protein_coding MGP_NODShiLtJ_T0041827.1 MGP_NODShiLtJ_G0022034.1 mouse_genomes_project 15 100704527 100709332 - Brd1 protein_coding processed_transcript MGP_NODShiLtJ_T0041828.1 MGP_NODShiLtJ_G0022034.1 mouse_genomes_project 15 100707318 100749533 - MGP_NODShiLtJ_P0041828 Brd1 protein_coding protein_coding MGP_NODShiLtJ_T0041829.1 MGP_NODShiLtJ_G0022034.1 mouse_genomes_project 15 100722392 100728644 - Brd1 protein_coding processed_transcript MGP_NODShiLtJ_T0041830.1 MGP_NODShiLtJ_G0022034.1 mouse_genomes_project 15 100722925 100726529 - Brd1 protein_coding processed_transcript MGP_NODShiLtJ_T0041280.1 MGP_NODShiLtJ_G0021866.1 mouse_genomes_project 15 88919453 89055381 - MGP_NODShiLtJ_P0041280 Cacng2 protein_coding protein_coding MGP_NODShiLtJ_T0100172.1 MGP_NODShiLtJ_G0038566.1 mouse_genomes_project 15 66566554 66566690 - Gm22299 snoRNA snoRNA MGP_NODShiLtJ_T0040580.1 MGP_NODShiLtJ_G0021650.1 mouse_genomes_project 15 43205573 43244721 + MGP_NODShiLtJ_P0040580 Dcaf13 protein_coding protein_coding MGP_NODShiLtJ_T0040256.1 MGP_NODShiLtJ_G0021543.1 mouse_genomes_project 15 5396054 5668447 - MGP_NODShiLtJ_P0040256 Wdr70 protein_coding protein_coding MGP_NODShiLtJ_T0040257.1 MGP_NODShiLtJ_G0021543.1 mouse_genomes_project 15 5662364 5668381 - MGP_NODShiLtJ_P0040257 Wdr70 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040952.1 MGP_NODShiLtJ_G0021783.1 mouse_genomes_project 15 85776257 85782062 + MGP_NODShiLtJ_P0040952 BC025446 protein_coding protein_coding MGP_NODShiLtJ_T0040953.1 MGP_NODShiLtJ_G0021783.1 mouse_genomes_project 15 85776595 85782773 + MGP_NODShiLtJ_P0040953 BC025446 protein_coding protein_coding MGP_NODShiLtJ_T0006692.1 MGP_NODShiLtJ_G0005520.1 mouse_genomes_project 15 42398079 42401686 - lincRNA lincRNA MGP_NODShiLtJ_T0042154.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111538448 111573930 - MGP_NODShiLtJ_P0042154 Ccnt1 protein_coding protein_coding MGP_NODShiLtJ_T0042155.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111538458 111543941 - Ccnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0042156.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111544131 111570645 - MGP_NODShiLtJ_P0042156 Ccnt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042157.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111544131 111570645 - MGP_NODShiLtJ_P0042157 Ccnt1 protein_coding protein_coding MGP_NODShiLtJ_T0042158.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111545059 111555987 - Ccnt1 protein_coding retained_intron MGP_NODShiLtJ_T0042159.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111545260 111547941 - Ccnt1 protein_coding retained_intron MGP_NODShiLtJ_T0042160.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111545487 111568148 - Ccnt1 protein_coding retained_intron MGP_NODShiLtJ_T0042161.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111549568 111570554 - Ccnt1 protein_coding retained_intron MGP_NODShiLtJ_T0042162.1 MGP_NODShiLtJ_G0022129.1 mouse_genomes_project 15 111559899 111570689 - Ccnt1 protein_coding retained_intron MGP_NODShiLtJ_T0041609.1 MGP_NODShiLtJ_G0021956.1 mouse_genomes_project 15 93241150 93257254 + MGP_NODShiLtJ_P0041609 Csdc2 protein_coding protein_coding MGP_NODShiLtJ_T0041610.1 MGP_NODShiLtJ_G0021956.1 mouse_genomes_project 15 93241381 93253187 + MGP_NODShiLtJ_P0041610 Csdc2 protein_coding protein_coding MGP_NODShiLtJ_T0041611.1 MGP_NODShiLtJ_G0021956.1 mouse_genomes_project 15 93252048 93253205 + Csdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0041612.1 MGP_NODShiLtJ_G0021956.1 mouse_genomes_project 15 93253278 93257247 + Csdc2 protein_coding retained_intron MGP_NODShiLtJ_T0042208.1 MGP_NODShiLtJ_G0022151.1 mouse_genomes_project 15 112171931 112181812 + Dnajc22 protein_coding processed_transcript MGP_NODShiLtJ_T0042209.1 MGP_NODShiLtJ_G0022151.1 mouse_genomes_project 15 112180320 112185437 + MGP_NODShiLtJ_P0042209 Dnajc22 protein_coding protein_coding MGP_NODShiLtJ_T0009959.1 MGP_NODShiLtJ_G0008092.1 mouse_genomes_project 15 82043117 82043304 + miRNA miRNA MGP_NODShiLtJ_T0042148.1 MGP_NODShiLtJ_G0022125.1 mouse_genomes_project 15 111436094 111437152 + MGP_NODShiLtJ_P0042148 Olfr281 protein_coding protein_coding MGP_NODShiLtJ_T0040985.1 MGP_NODShiLtJ_G0021793.1 mouse_genomes_project 15 86377705 86387810 + MGP_NODShiLtJ_P0040985 Rhpn1 protein_coding protein_coding MGP_NODShiLtJ_T0040986.1 MGP_NODShiLtJ_G0021793.1 mouse_genomes_project 15 86377733 86387812 + Rhpn1 protein_coding retained_intron MGP_NODShiLtJ_T0040987.1 MGP_NODShiLtJ_G0021793.1 mouse_genomes_project 15 86377743 86387807 + Rhpn1 protein_coding retained_intron MGP_NODShiLtJ_T0040988.1 MGP_NODShiLtJ_G0021793.1 mouse_genomes_project 15 86377754 86387810 + MGP_NODShiLtJ_P0040988 Rhpn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040989.1 MGP_NODShiLtJ_G0021793.1 mouse_genomes_project 15 86377819 86387627 + MGP_NODShiLtJ_P0040989 Rhpn1 protein_coding protein_coding MGP_NODShiLtJ_T0042249.1 MGP_NODShiLtJ_G0022162.1 mouse_genomes_project 15 112699390 112704835 + MGP_NODShiLtJ_P0042249 Aqp2 protein_coding protein_coding MGP_NODShiLtJ_T0041910.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101418422 101435530 + MGP_NODShiLtJ_P0041910 Ncaph2 protein_coding protein_coding MGP_NODShiLtJ_T0041911.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101418439 101435530 + MGP_NODShiLtJ_P0041911 Ncaph2 protein_coding protein_coding MGP_NODShiLtJ_T0041912.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101418439 101435530 + MGP_NODShiLtJ_P0041912 Ncaph2 protein_coding protein_coding MGP_NODShiLtJ_T0041913.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101418466 101435530 + MGP_NODShiLtJ_P0041913 Ncaph2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041914.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101418508 101426584 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041915.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101418524 101426608 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041916.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101418617 101428035 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041917.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101432395 101433379 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041918.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101432581 101433944 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041919.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101432736 101433893 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041920.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101433001 101433636 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041921.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101433350 101434228 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041922.1 MGP_NODShiLtJ_G0022056.1 mouse_genomes_project 15 101433456 101434267 + Ncaph2 protein_coding retained_intron MGP_NODShiLtJ_T0041016.1 MGP_NODShiLtJ_G0021803.1 mouse_genomes_project 15 86643358 86654282 + MGP_NODShiLtJ_P0041016 Zfp623 protein_coding protein_coding MGP_NODShiLtJ_T0097953.1 MGP_NODShiLtJ_G0036365.1 mouse_genomes_project 15 93689219 93689338 + n-R5s41 rRNA rRNA MGP_NODShiLtJ_T0011280.1 MGP_NODShiLtJ_G0009413.1 mouse_genomes_project 15 71085529 71085656 + Gm27957 misc_RNA misc_RNA MGP_NODShiLtJ_T0042480.1 MGP_NODShiLtJ_G0022246.1 mouse_genomes_project 15 115919012 115951416 + MGP_NODShiLtJ_P0042480 Pcbp2 protein_coding protein_coding MGP_NODShiLtJ_T0042481.1 MGP_NODShiLtJ_G0022246.1 mouse_genomes_project 15 115919012 115951416 + MGP_NODShiLtJ_P0042481 Pcbp2 protein_coding protein_coding MGP_NODShiLtJ_T0042482.1 MGP_NODShiLtJ_G0022246.1 mouse_genomes_project 15 115919012 115951416 + MGP_NODShiLtJ_P0042482 Pcbp2 protein_coding protein_coding MGP_NODShiLtJ_T0041560.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92860346 92863343 + Ep300 protein_coding processed_transcript MGP_NODShiLtJ_T0041561.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92860392 92930763 + MGP_NODShiLtJ_P0041561 Ep300 protein_coding protein_coding MGP_NODShiLtJ_T0041562.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92861215 92902287 + Ep300 protein_coding retained_intron MGP_NODShiLtJ_T0041563.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92891223 92901587 + MGP_NODShiLtJ_P0041563 Ep300 protein_coding protein_coding MGP_NODShiLtJ_T0041564.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92891241 92894429 + Ep300 protein_coding retained_intron MGP_NODShiLtJ_T0041565.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92899130 92904522 + MGP_NODShiLtJ_P0041565 Ep300 protein_coding protein_coding MGP_NODShiLtJ_T0041566.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92904448 92905932 + MGP_NODShiLtJ_P0041566 Ep300 protein_coding protein_coding MGP_NODShiLtJ_T0041567.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92912030 92918613 + Ep300 protein_coding retained_intron MGP_NODShiLtJ_T0041568.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92914199 92922672 + Ep300 protein_coding retained_intron MGP_NODShiLtJ_T0041569.1 MGP_NODShiLtJ_G0021945.1 mouse_genomes_project 15 92922910 92927243 + Ep300 protein_coding retained_intron MGP_NODShiLtJ_T0042304.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113556498 113595716 - MGP_NODShiLtJ_P0042304 Slc11a2 protein_coding protein_coding MGP_NODShiLtJ_T0042305.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113560565 113595767 - MGP_NODShiLtJ_P0042305 Slc11a2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042306.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113561017 113595663 - MGP_NODShiLtJ_P0042306 Slc11a2 protein_coding protein_coding MGP_NODShiLtJ_T0042307.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113568803 113574414 - MGP_NODShiLtJ_P0042307 Slc11a2 protein_coding protein_coding MGP_NODShiLtJ_T0042308.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113568991 113574593 - Slc11a2 protein_coding retained_intron MGP_NODShiLtJ_T0042309.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113577575 113597732 - MGP_NODShiLtJ_P0042309 Slc11a2 protein_coding protein_coding MGP_NODShiLtJ_T0042310.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113579440 113595630 - MGP_NODShiLtJ_P0042310 Slc11a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042311.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113580574 113596874 - MGP_NODShiLtJ_P0042311 Slc11a2 protein_coding protein_coding MGP_NODShiLtJ_T0042312.1 MGP_NODShiLtJ_G0022182.1 mouse_genomes_project 15 113581420 113596752 - MGP_NODShiLtJ_P0042312 Slc11a2 protein_coding protein_coding MGP_NODShiLtJ_T0012959.1 MGP_NODShiLtJ_G0011067.1 mouse_genomes_project 15 62986569 62987551 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011275.1 MGP_NODShiLtJ_G0009408.1 mouse_genomes_project 15 48027004 48027301 - Gm22037 misc_RNA misc_RNA MGP_NODShiLtJ_T0041242.1 MGP_NODShiLtJ_G0021856.1 mouse_genomes_project 15 87904535 87916028 + MGP_NODShiLtJ_P0041242 Apol6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041243.1 MGP_NODShiLtJ_G0021856.1 mouse_genomes_project 15 87904881 87912122 + MGP_NODShiLtJ_P0041243 Apol6 protein_coding protein_coding MGP_NODShiLtJ_T0041244.1 MGP_NODShiLtJ_G0021856.1 mouse_genomes_project 15 87905012 87910469 + MGP_NODShiLtJ_P0041244 Apol6 protein_coding protein_coding MGP_NODShiLtJ_T0041245.1 MGP_NODShiLtJ_G0021856.1 mouse_genomes_project 15 87905082 87916837 + MGP_NODShiLtJ_P0041245 Apol6 protein_coding protein_coding MGP_NODShiLtJ_T0041246.1 MGP_NODShiLtJ_G0021856.1 mouse_genomes_project 15 87905084 87911090 + MGP_NODShiLtJ_P0041246 Apol6 protein_coding protein_coding MGP_NODShiLtJ_T0041247.1 MGP_NODShiLtJ_G0021856.1 mouse_genomes_project 15 87905293 87906045 + Apol6 protein_coding processed_transcript MGP_NODShiLtJ_T0041248.1 MGP_NODShiLtJ_G0021856.1 mouse_genomes_project 15 87912524 87915774 + Apol6 protein_coding processed_transcript MGP_NODShiLtJ_T0040265.1 MGP_NODShiLtJ_G0021546.1 mouse_genomes_project 15 5880269 6080620 - MGP_NODShiLtJ_P0040265 Nipbl protein_coding protein_coding MGP_NODShiLtJ_T0041931.1 MGP_NODShiLtJ_G0022063.1 mouse_genomes_project 15 101486911 101499823 - MGP_NODShiLtJ_P0041931 Cpt1b protein_coding protein_coding MGP_NODShiLtJ_T0041932.1 MGP_NODShiLtJ_G0022063.1 mouse_genomes_project 15 101489274 101493366 - MGP_NODShiLtJ_P0041932 Cpt1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041933.1 MGP_NODShiLtJ_G0022063.1 mouse_genomes_project 15 101496111 101496819 - Cpt1b protein_coding retained_intron MGP_NODShiLtJ_T0041934.1 MGP_NODShiLtJ_G0022063.1 mouse_genomes_project 15 101497183 101499755 - MGP_NODShiLtJ_P0041934 Cpt1b protein_coding protein_coding MGP_NODShiLtJ_T0009966.1 MGP_NODShiLtJ_G0008099.1 mouse_genomes_project 15 89949313 89949387 + Mir6955 miRNA miRNA MGP_NODShiLtJ_T0041836.1 MGP_NODShiLtJ_G0022037.1 mouse_genomes_project 15 100850815 100857877 + MGP_NODShiLtJ_P0041836 Creld2 protein_coding protein_coding MGP_NODShiLtJ_T0009999.1 MGP_NODShiLtJ_G0008132.1 mouse_genomes_project 15 114680308 114680391 + Mir1941 miRNA miRNA MGP_NODShiLtJ_T0040522.1 MGP_NODShiLtJ_G0021633.1 mouse_genomes_project 15 40597226 40611568 - MGP_NODShiLtJ_P0040522 Pabpc1 protein_coding protein_coding MGP_NODShiLtJ_T0040523.1 MGP_NODShiLtJ_G0021633.1 mouse_genomes_project 15 40597378 40599387 - MGP_NODShiLtJ_P0040523 Pabpc1 protein_coding protein_coding MGP_NODShiLtJ_T0040524.1 MGP_NODShiLtJ_G0021633.1 mouse_genomes_project 15 40597391 40599680 - Pabpc1 protein_coding processed_transcript MGP_NODShiLtJ_T0040525.1 MGP_NODShiLtJ_G0021633.1 mouse_genomes_project 15 40597391 40598794 - Pabpc1 protein_coding processed_transcript MGP_NODShiLtJ_T0040526.1 MGP_NODShiLtJ_G0021633.1 mouse_genomes_project 15 40597568 40599104 - Pabpc1 protein_coding processed_transcript MGP_NODShiLtJ_T0040527.1 MGP_NODShiLtJ_G0021633.1 mouse_genomes_project 15 40599668 40605083 - Pabpc1 protein_coding processed_transcript MGP_NODShiLtJ_T0040528.1 MGP_NODShiLtJ_G0021633.1 mouse_genomes_project 15 40606232 40611568 - Pabpc1 protein_coding processed_transcript MGP_NODShiLtJ_T0006691.1 MGP_NODShiLtJ_G0005519.1 mouse_genomes_project 15 41810976 41832898 + Gm15942 lincRNA lincRNA MGP_NODShiLtJ_T0042234.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112497982 112515063 + MGP_NODShiLtJ_P0042234 Tmbim6 protein_coding protein_coding MGP_NODShiLtJ_T0042235.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112498086 112513657 + MGP_NODShiLtJ_P0042235 Tmbim6 protein_coding protein_coding MGP_NODShiLtJ_T0042236.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112498086 112513559 + MGP_NODShiLtJ_P0042236 Tmbim6 protein_coding protein_coding MGP_NODShiLtJ_T0042237.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112498122 112513514 + MGP_NODShiLtJ_P0042237 Tmbim6 protein_coding protein_coding MGP_NODShiLtJ_T0042238.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112498319 112513558 + MGP_NODShiLtJ_P0042238 Tmbim6 protein_coding protein_coding MGP_NODShiLtJ_T0042239.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112498692 112511699 + MGP_NODShiLtJ_P0042239 Tmbim6 protein_coding protein_coding MGP_NODShiLtJ_T0042240.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112498710 112513633 + MGP_NODShiLtJ_P0042240 Tmbim6 protein_coding protein_coding MGP_NODShiLtJ_T0042241.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112506132 112507153 + MGP_NODShiLtJ_P0042241 Tmbim6 protein_coding protein_coding MGP_NODShiLtJ_T0042242.1 MGP_NODShiLtJ_G0022158.1 mouse_genomes_project 15 112510895 112513814 + Tmbim6 protein_coding retained_intron MGP_NODShiLtJ_T0000924.1 MGP_NODShiLtJ_G0000853.1 mouse_genomes_project 15 104940837 104943727 + TEC TEC MGP_NODShiLtJ_T0097956.1 MGP_NODShiLtJ_G0036368.1 mouse_genomes_project 15 113623609 113623719 + n-R5s43 rRNA rRNA MGP_NODShiLtJ_T0041358.1 MGP_NODShiLtJ_G0021893.1 mouse_genomes_project 15 90150292 90171539 + MGP_NODShiLtJ_P0041358 Eif3l protein_coding protein_coding MGP_NODShiLtJ_T0097767.1 MGP_NODShiLtJ_G0036179.1 mouse_genomes_project 15 86613683 86616073 + pseudogene pseudogene MGP_NODShiLtJ_T0101659.1 MGP_NODShiLtJ_G0039828.1 mouse_genomes_project 15 85435734 85435885 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0041148.1 MGP_NODShiLtJ_G0021829.1 mouse_genomes_project 15 87237512 87239543 + MGP_NODShiLtJ_P0041148 Scx protein_coding protein_coding MGP_NODShiLtJ_T0040616.1 MGP_NODShiLtJ_G0021669.1 mouse_genomes_project 15 49930645 50074746 - MGP_NODShiLtJ_P0040616 Sybu protein_coding protein_coding MGP_NODShiLtJ_T0040617.1 MGP_NODShiLtJ_G0021669.1 mouse_genomes_project 15 49930645 50074746 - MGP_NODShiLtJ_P0040617 Sybu protein_coding protein_coding MGP_NODShiLtJ_T0040618.1 MGP_NODShiLtJ_G0021669.1 mouse_genomes_project 15 49930645 50025301 - MGP_NODShiLtJ_P0040618 Sybu protein_coding protein_coding MGP_NODShiLtJ_T0041758.1 MGP_NODShiLtJ_G0022007.1 mouse_genomes_project 15 96275884 96280305 - MGP_NODShiLtJ_P0041758 Ldoc1l protein_coding protein_coding MGP_NODShiLtJ_T0041307.1 MGP_NODShiLtJ_G0021875.1 mouse_genomes_project 15 89494972 89510603 - MGP_NODShiLtJ_P0041307 Il2rb protein_coding protein_coding MGP_NODShiLtJ_T0041308.1 MGP_NODShiLtJ_G0021875.1 mouse_genomes_project 15 89495744 89509308 - MGP_NODShiLtJ_P0041308 Il2rb protein_coding protein_coding MGP_NODShiLtJ_T0042125.1 MGP_NODShiLtJ_G0022117.1 mouse_genomes_project 15 111159699 111162365 - Olfr287 protein_coding processed_transcript MGP_NODShiLtJ_T0042126.1 MGP_NODShiLtJ_G0022117.1 mouse_genomes_project 15 111159699 111176965 - MGP_NODShiLtJ_P0042126 Olfr287 protein_coding protein_coding MGP_NODShiLtJ_T0042127.1 MGP_NODShiLtJ_G0022117.1 mouse_genomes_project 15 111160142 111162097 - Olfr287 protein_coding transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0042128.1 MGP_NODShiLtJ_G0022117.1 mouse_genomes_project 15 111160365 111176806 - Olfr287 protein_coding processed_transcript MGP_NODShiLtJ_T0042129.1 MGP_NODShiLtJ_G0022117.1 mouse_genomes_project 15 111160475 111176965 - Olfr287 protein_coding processed_transcript MGP_NODShiLtJ_T0042130.1 MGP_NODShiLtJ_G0022117.1 mouse_genomes_project 15 111160605 111176810 - Olfr287 protein_coding processed_transcript MGP_NODShiLtJ_T0042131.1 MGP_NODShiLtJ_G0022117.1 mouse_genomes_project 15 111162678 111176863 - Olfr287 protein_coding processed_transcript MGP_NODShiLtJ_T0017333.1 MGP_NODShiLtJ_G0015175.1 mouse_genomes_project 15 101103985 101107054 - 1810021B22Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017334.1 MGP_NODShiLtJ_G0015175.1 mouse_genomes_project 15 101103985 101107899 - 1810021B22Rik processed_transcript antisense MGP_NODShiLtJ_T0017335.1 MGP_NODShiLtJ_G0015175.1 mouse_genomes_project 15 101103987 101107899 - 1810021B22Rik processed_transcript antisense MGP_NODShiLtJ_T0017336.1 MGP_NODShiLtJ_G0015175.1 mouse_genomes_project 15 101103987 101107961 - 1810021B22Rik processed_transcript antisense MGP_NODShiLtJ_T0017337.1 MGP_NODShiLtJ_G0015175.1 mouse_genomes_project 15 101103987 101108602 - 1810021B22Rik processed_transcript lincRNA MGP_NODShiLtJ_T0042083.1 MGP_NODShiLtJ_G0022107.1 mouse_genomes_project 15 110709686 110718011 + MGP_NODShiLtJ_P0042083 Slc48a1 protein_coding protein_coding MGP_NODShiLtJ_T0042084.1 MGP_NODShiLtJ_G0022107.1 mouse_genomes_project 15 110709759 110715286 + MGP_NODShiLtJ_P0042084 Slc48a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003538.1 MGP_NODShiLtJ_G0003207.1 mouse_genomes_project 15 4018119 4073044 - Gm2245 antisense antisense MGP_NODShiLtJ_T0042331.1 MGP_NODShiLtJ_G0022190.1 mouse_genomes_project 15 113852748 113882835 - MGP_NODShiLtJ_P0042331 Bin2 protein_coding protein_coding MGP_NODShiLtJ_T0042332.1 MGP_NODShiLtJ_G0022190.1 mouse_genomes_project 15 113852754 113882787 - MGP_NODShiLtJ_P0042332 Bin2 protein_coding protein_coding MGP_NODShiLtJ_T0042333.1 MGP_NODShiLtJ_G0022190.1 mouse_genomes_project 15 113852754 113882809 - MGP_NODShiLtJ_P0042333 Bin2 protein_coding protein_coding MGP_NODShiLtJ_T0042334.1 MGP_NODShiLtJ_G0022190.1 mouse_genomes_project 15 113858416 113882787 - MGP_NODShiLtJ_P0042334 Bin2 protein_coding protein_coding MGP_NODShiLtJ_T0042335.1 MGP_NODShiLtJ_G0022190.1 mouse_genomes_project 15 113858512 113882807 - MGP_NODShiLtJ_P0042335 Bin2 protein_coding protein_coding MGP_NODShiLtJ_T0042336.1 MGP_NODShiLtJ_G0022190.1 mouse_genomes_project 15 113858554 113864730 - Bin2 protein_coding processed_transcript MGP_NODShiLtJ_T0042337.1 MGP_NODShiLtJ_G0022190.1 mouse_genomes_project 15 113862297 113863809 - Bin2 protein_coding retained_intron MGP_NODShiLtJ_T0041334.1 MGP_NODShiLtJ_G0021888.1 mouse_genomes_project 15 90000508 90006486 + MGP_NODShiLtJ_P0041334 Nol12 protein_coding protein_coding MGP_NODShiLtJ_T0041335.1 MGP_NODShiLtJ_G0021888.1 mouse_genomes_project 15 90000547 90006182 + MGP_NODShiLtJ_P0041335 Nol12 protein_coding protein_coding MGP_NODShiLtJ_T0041336.1 MGP_NODShiLtJ_G0021888.1 mouse_genomes_project 15 90000552 90006418 + MGP_NODShiLtJ_P0041336 Nol12 protein_coding protein_coding MGP_NODShiLtJ_T0041337.1 MGP_NODShiLtJ_G0021888.1 mouse_genomes_project 15 90000765 90002139 + MGP_NODShiLtJ_P0041337 Nol12 protein_coding protein_coding MGP_NODShiLtJ_T0012970.1 MGP_NODShiLtJ_G0011078.1 mouse_genomes_project 15 86445931 86533433 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042299.1 MGP_NODShiLtJ_G0022178.1 mouse_genomes_project 15 113517176 113552415 + MGP_NODShiLtJ_P0042299 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041975.1 MGP_NODShiLtJ_G0022073.1 mouse_genomes_project 15 103188346 103321148 - MGP_NODShiLtJ_P0041975 Kif21a protein_coding protein_coding MGP_NODShiLtJ_T0041976.1 MGP_NODShiLtJ_G0022073.1 mouse_genomes_project 15 103188346 103321148 - MGP_NODShiLtJ_P0041976 Kif21a protein_coding protein_coding MGP_NODShiLtJ_T0041977.1 MGP_NODShiLtJ_G0022073.1 mouse_genomes_project 15 103188346 103321148 - MGP_NODShiLtJ_P0041977 Kif21a protein_coding protein_coding MGP_NODShiLtJ_T0041978.1 MGP_NODShiLtJ_G0022073.1 mouse_genomes_project 15 103188346 103321148 - MGP_NODShiLtJ_P0041978 Kif21a protein_coding protein_coding MGP_NODShiLtJ_T0041979.1 MGP_NODShiLtJ_G0022073.1 mouse_genomes_project 15 103188346 103321148 - MGP_NODShiLtJ_P0041979 Kif21a protein_coding protein_coding MGP_NODShiLtJ_T0040338.1 MGP_NODShiLtJ_G0021564.1 mouse_genomes_project 15 8465204 8617856 - MGP_NODShiLtJ_P0040338 Rai14 protein_coding protein_coding MGP_NODShiLtJ_T0040339.1 MGP_NODShiLtJ_G0021564.1 mouse_genomes_project 15 8465204 8619049 - MGP_NODShiLtJ_P0040339 Rai14 protein_coding protein_coding MGP_NODShiLtJ_T0006758.1 MGP_NODShiLtJ_G0005564.1 mouse_genomes_project 15 116613671 116638289 - D930007P13Rik lincRNA lincRNA MGP_NODShiLtJ_T0040675.1 MGP_NODShiLtJ_G0021692.1 mouse_genomes_project 15 63823527 63847153 - MGP_NODShiLtJ_P0040675 Mrpl13 protein_coding protein_coding MGP_NODShiLtJ_T0040676.1 MGP_NODShiLtJ_G0021692.1 mouse_genomes_project 15 63823527 63846754 - MGP_NODShiLtJ_P0040676 Mrpl13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040677.1 MGP_NODShiLtJ_G0021692.1 mouse_genomes_project 15 63828069 63837596 - MGP_NODShiLtJ_P0040677 Mrpl13 protein_coding protein_coding MGP_NODShiLtJ_T0040678.1 MGP_NODShiLtJ_G0021692.1 mouse_genomes_project 15 63832304 63846688 - Mrpl13 protein_coding retained_intron MGP_NODShiLtJ_T0040679.1 MGP_NODShiLtJ_G0021692.1 mouse_genomes_project 15 63838885 63846680 - Mrpl13 protein_coding retained_intron MGP_NODShiLtJ_T0040921.1 MGP_NODShiLtJ_G0021772.1 mouse_genomes_project 15 85208981 85210546 - MGP_NODShiLtJ_P0040921 Ly6d protein_coding protein_coding MGP_NODShiLtJ_T0041373.1 MGP_NODShiLtJ_G0021896.1 mouse_genomes_project 15 90219627 90229574 + MGP_NODShiLtJ_P0041373 Polr2f protein_coding protein_coding MGP_NODShiLtJ_T0040248.1 MGP_NODShiLtJ_G0021541.1 mouse_genomes_project 15 4650125 4846052 - MGP_NODShiLtJ_P0040248 Egflam protein_coding protein_coding MGP_NODShiLtJ_T0040249.1 MGP_NODShiLtJ_G0021541.1 mouse_genomes_project 15 4650583 4846099 - MGP_NODShiLtJ_P0040249 Egflam protein_coding protein_coding MGP_NODShiLtJ_T0040250.1 MGP_NODShiLtJ_G0021541.1 mouse_genomes_project 15 4650588 4846143 - MGP_NODShiLtJ_P0040250 Egflam protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040251.1 MGP_NODShiLtJ_G0021541.1 mouse_genomes_project 15 4656012 4667769 - Egflam protein_coding retained_intron MGP_NODShiLtJ_T0040252.1 MGP_NODShiLtJ_G0021541.1 mouse_genomes_project 15 4678902 4846017 - Egflam protein_coding retained_intron MGP_NODShiLtJ_T0040253.1 MGP_NODShiLtJ_G0021541.1 mouse_genomes_project 15 4698963 4700221 - Egflam protein_coding processed_transcript MGP_NODShiLtJ_T0040254.1 MGP_NODShiLtJ_G0021541.1 mouse_genomes_project 15 4752519 4846009 - Egflam protein_coding retained_intron MGP_NODShiLtJ_T0041128.1 MGP_NODShiLtJ_G0021825.1 mouse_genomes_project 15 87140266 87142768 + MGP_NODShiLtJ_P0041128 Hgh1 protein_coding protein_coding MGP_NODShiLtJ_T0042492.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969558 115975041 + MGP_NODShiLtJ_P0042492 Tarbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042493.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969612 115972347 + Tarbp2 protein_coding retained_intron MGP_NODShiLtJ_T0042494.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969723 115974969 + MGP_NODShiLtJ_P0042494 Tarbp2 protein_coding protein_coding MGP_NODShiLtJ_T0042495.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969793 115975043 + Tarbp2 protein_coding retained_intron MGP_NODShiLtJ_T0042496.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969821 115973116 + MGP_NODShiLtJ_P0042496 Tarbp2 protein_coding protein_coding MGP_NODShiLtJ_T0042497.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969825 115975043 + MGP_NODShiLtJ_P0042497 Tarbp2 protein_coding protein_coding MGP_NODShiLtJ_T0042498.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969864 115971087 + Tarbp2 protein_coding retained_intron MGP_NODShiLtJ_T0042499.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969913 115974971 + MGP_NODShiLtJ_P0042499 Tarbp2 protein_coding protein_coding MGP_NODShiLtJ_T0042500.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969923 115974586 + Tarbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0042501.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115969934 115973706 + Tarbp2 protein_coding retained_intron MGP_NODShiLtJ_T0042502.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115970092 115973918 + MGP_NODShiLtJ_P0042502 Tarbp2 protein_coding protein_coding MGP_NODShiLtJ_T0042503.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115970165 115973447 + MGP_NODShiLtJ_P0042503 Tarbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042504.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115970168 115974269 + MGP_NODShiLtJ_P0042504 Tarbp2 protein_coding protein_coding MGP_NODShiLtJ_T0042505.1 MGP_NODShiLtJ_G0022249.1 mouse_genomes_project 15 115972406 115973807 + Tarbp2 protein_coding retained_intron MGP_NODShiLtJ_T0042410.1 MGP_NODShiLtJ_G0022220.1 mouse_genomes_project 15 115221412 115226771 - MGP_NODShiLtJ_P0042410 Krt1 protein_coding protein_coding MGP_NODShiLtJ_T0017328.1 MGP_NODShiLtJ_G0015171.1 mouse_genomes_project 15 89055058 89081447 + A730060N03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0098922.1 MGP_NODShiLtJ_G0037316.1 mouse_genomes_project 15 108351200 108351304 - Gm24668 snRNA snRNA MGP_NODShiLtJ_T0040345.1 MGP_NODShiLtJ_G0021569.1 mouse_genomes_project 15 9001677 9310750 + MGP_NODShiLtJ_P0040345 Adamts12 protein_coding protein_coding MGP_NODShiLtJ_T0041557.1 MGP_NODShiLtJ_G0021942.1 mouse_genomes_project 15 92655722 92657096 - MGP_NODShiLtJ_P0041557 Dnajb7 protein_coding protein_coding MGP_NODShiLtJ_T0040932.1 MGP_NODShiLtJ_G0021779.1 mouse_genomes_project 15 85351264 85374798 - 2010109I03Rik protein_coding processed_transcript MGP_NODShiLtJ_T0040933.1 MGP_NODShiLtJ_G0021779.1 mouse_genomes_project 15 85353401 85356844 - MGP_NODShiLtJ_P0040933 2010109I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0003575.1 MGP_NODShiLtJ_G0003235.1 mouse_genomes_project 15 111594657 111595758 + Gm29331 antisense antisense MGP_NODShiLtJ_T0042123.1 MGP_NODShiLtJ_G0022115.1 mouse_genomes_project 15 111118608 111120936 + MGP_NODShiLtJ_P0042123 Ccdc184 protein_coding protein_coding MGP_NODShiLtJ_T0100176.1 MGP_NODShiLtJ_G0038570.1 mouse_genomes_project 15 71765746 71765880 + Gm22521 snoRNA snoRNA MGP_NODShiLtJ_T0000916.1 MGP_NODShiLtJ_G0000845.1 mouse_genomes_project 15 22318620 22319041 + TEC TEC MGP_NODShiLtJ_T0042192.1 MGP_NODShiLtJ_G0022143.1 mouse_genomes_project 15 111923729 111927403 - MGP_NODShiLtJ_P0042192 Rhebl1 protein_coding protein_coding MGP_NODShiLtJ_T0042193.1 MGP_NODShiLtJ_G0022143.1 mouse_genomes_project 15 111923997 111927089 - Rhebl1 protein_coding processed_transcript MGP_NODShiLtJ_T0042194.1 MGP_NODShiLtJ_G0022143.1 mouse_genomes_project 15 111925484 111926745 - Rhebl1 protein_coding retained_intron MGP_NODShiLtJ_T0041652.1 MGP_NODShiLtJ_G0021970.1 mouse_genomes_project 15 93673100 93685397 - MGP_NODShiLtJ_P0041652 Naga protein_coding protein_coding MGP_NODShiLtJ_T0100166.1 MGP_NODShiLtJ_G0038560.1 mouse_genomes_project 15 49549836 49549962 + Gm24903 snoRNA snoRNA MGP_NODShiLtJ_T0041764.1 MGP_NODShiLtJ_G0022010.1 mouse_genomes_project 15 96520172 96596707 - MGP_NODShiLtJ_P0041764 Phf21b protein_coding protein_coding MGP_NODShiLtJ_T0041765.1 MGP_NODShiLtJ_G0022010.1 mouse_genomes_project 15 96520173 96522241 - Phf21b protein_coding processed_transcript MGP_NODShiLtJ_T0041766.1 MGP_NODShiLtJ_G0022010.1 mouse_genomes_project 15 96520175 96597646 - MGP_NODShiLtJ_P0041766 Phf21b protein_coding protein_coding MGP_NODShiLtJ_T0041767.1 MGP_NODShiLtJ_G0022010.1 mouse_genomes_project 15 96520925 96597348 - MGP_NODShiLtJ_P0041767 Phf21b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041768.1 MGP_NODShiLtJ_G0022010.1 mouse_genomes_project 15 96522162 96526290 - Phf21b protein_coding retained_intron MGP_NODShiLtJ_T0041769.1 MGP_NODShiLtJ_G0022010.1 mouse_genomes_project 15 96529348 96538223 - Phf21b protein_coding retained_intron MGP_NODShiLtJ_T0010006.1 MGP_NODShiLtJ_G0008139.1 mouse_genomes_project 15 116452722 116452807 + Mir196a-2 miRNA miRNA MGP_NODShiLtJ_T0041431.1 MGP_NODShiLtJ_G0021911.1 mouse_genomes_project 15 90793660 90796859 + MGP_NODShiLtJ_P0041431 Tomm22 protein_coding protein_coding MGP_NODShiLtJ_T0041432.1 MGP_NODShiLtJ_G0021911.1 mouse_genomes_project 15 90793890 90796666 + Tomm22 protein_coding processed_transcript MGP_NODShiLtJ_T0011273.1 MGP_NODShiLtJ_G0009406.1 mouse_genomes_project 15 17937512 17937820 + Gm22895 misc_RNA misc_RNA MGP_NODShiLtJ_T0009968.1 MGP_NODShiLtJ_G0008101.1 mouse_genomes_project 15 90473538 90473611 - Mir1943 miRNA miRNA MGP_NODShiLtJ_T0041281.1 MGP_NODShiLtJ_G0021867.1 mouse_genomes_project 15 89096672 89116825 - MGP_NODShiLtJ_P0041281 Ift27 protein_coding protein_coding MGP_NODShiLtJ_T0006733.1 MGP_NODShiLtJ_G0005545.1 mouse_genomes_project 15 97381199 97393796 + AU022754 lincRNA lincRNA MGP_NODShiLtJ_T0098878.1 MGP_NODShiLtJ_G0037272.1 mouse_genomes_project 15 524570 524696 - Gm22031 snRNA snRNA MGP_NODShiLtJ_T0040174.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 207594 502994 - MGP_NODShiLtJ_P0040174 Ghr protein_coding protein_coding MGP_NODShiLtJ_T0040175.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 208843 501630 - MGP_NODShiLtJ_P0040175 Ghr protein_coding protein_coding MGP_NODShiLtJ_T0040176.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 218872 502952 - MGP_NODShiLtJ_P0040176 Ghr protein_coding protein_coding MGP_NODShiLtJ_T0040177.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 218886 382727 - MGP_NODShiLtJ_P0040177 Ghr protein_coding protein_coding MGP_NODShiLtJ_T0040178.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 224780 502384 - MGP_NODShiLtJ_P0040178 Ghr protein_coding protein_coding MGP_NODShiLtJ_T0040179.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 232551 502952 - Ghr protein_coding processed_transcript MGP_NODShiLtJ_T0040180.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 238103 502976 - Ghr protein_coding retained_intron MGP_NODShiLtJ_T0040181.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 239385 502975 - Ghr protein_coding processed_transcript MGP_NODShiLtJ_T0040182.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 281321 503256 - Ghr protein_coding retained_intron MGP_NODShiLtJ_T0040183.1 MGP_NODShiLtJ_G0021522.1 mouse_genomes_project 15 465824 502951 - Ghr protein_coding processed_transcript MGP_NODShiLtJ_T0101660.1 MGP_NODShiLtJ_G0039829.1 mouse_genomes_project 15 85741659 85745613 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101284.1 MGP_NODShiLtJ_G0039556.1 mouse_genomes_project 15 85839021 85842870 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101285.1 MGP_NODShiLtJ_G0039556.1 mouse_genomes_project 15 85839448 85842569 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0100145.1 MGP_NODShiLtJ_G0038539.1 mouse_genomes_project 15 2265421 2265502 + Snord72 snoRNA snoRNA MGP_NODShiLtJ_T0003587.1 MGP_NODShiLtJ_G0003245.1 mouse_genomes_project 15 114417433 114419082 - Gm16031 antisense antisense MGP_NODShiLtJ_T0040706.1 MGP_NODShiLtJ_G0021702.1 mouse_genomes_project 15 66552446 66603197 - MGP_NODShiLtJ_P0040706 Gm29394 protein_coding protein_coding MGP_NODShiLtJ_T0040709.1 MGP_NODShiLtJ_G0021702.1 mouse_genomes_project 15 66555162 66602979 - MGP_NODShiLtJ_P0040709 Gm29394 protein_coding protein_coding MGP_NODShiLtJ_T0040713.1 MGP_NODShiLtJ_G0021702.1 mouse_genomes_project 15 66573575 66602955 - MGP_NODShiLtJ_P0040713 Gm29394 protein_coding protein_coding MGP_NODShiLtJ_T0040714.1 MGP_NODShiLtJ_G0021702.1 mouse_genomes_project 15 66573694 66602978 - MGP_NODShiLtJ_P0040714 Gm29394 protein_coding protein_coding MGP_NODShiLtJ_T0042012.1 MGP_NODShiLtJ_G0022083.1 mouse_genomes_project 15 105934249 105946439 - MGP_NODShiLtJ_P0042012 Zcrb1 protein_coding protein_coding MGP_NODShiLtJ_T0042013.1 MGP_NODShiLtJ_G0022083.1 mouse_genomes_project 15 105934258 105946472 - MGP_NODShiLtJ_P0042013 Zcrb1 protein_coding protein_coding MGP_NODShiLtJ_T0042014.1 MGP_NODShiLtJ_G0022083.1 mouse_genomes_project 15 105934262 105939333 - Zcrb1 protein_coding retained_intron MGP_NODShiLtJ_T0042015.1 MGP_NODShiLtJ_G0022083.1 mouse_genomes_project 15 105934265 105939530 - Zcrb1 protein_coding retained_intron MGP_NODShiLtJ_T0042016.1 MGP_NODShiLtJ_G0022083.1 mouse_genomes_project 15 105935769 105936297 - Zcrb1 protein_coding retained_intron MGP_NODShiLtJ_T0042017.1 MGP_NODShiLtJ_G0022083.1 mouse_genomes_project 15 105935901 105939820 - Zcrb1 protein_coding retained_intron MGP_NODShiLtJ_T0042018.1 MGP_NODShiLtJ_G0022083.1 mouse_genomes_project 15 105935953 105946472 - MGP_NODShiLtJ_P0042018 Zcrb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042019.1 MGP_NODShiLtJ_G0022083.1 mouse_genomes_project 15 105942218 105946411 - Zcrb1 protein_coding retained_intron MGP_NODShiLtJ_T0009975.1 MGP_NODShiLtJ_G0008108.1 mouse_genomes_project 15 92861128 92861182 + Gm23880 miRNA miRNA MGP_NODShiLtJ_T0042531.1 MGP_NODShiLtJ_G0022256.1 mouse_genomes_project 15 116414932 116416781 + MGP_NODShiLtJ_P0042531 Hoxc12 protein_coding protein_coding MGP_NODShiLtJ_T0041778.1 MGP_NODShiLtJ_G0022017.1 mouse_genomes_project 15 96898380 96911868 + MGP_NODShiLtJ_P0041778 Ribc2 protein_coding protein_coding MGP_NODShiLtJ_T0098927.1 MGP_NODShiLtJ_G0037321.1 mouse_genomes_project 15 115805418 115805522 + Gm23590 snRNA snRNA MGP_NODShiLtJ_T0040664.1 MGP_NODShiLtJ_G0021689.1 mouse_genomes_project 15 63357902 63375548 - MGP_NODShiLtJ_P0040664 Gm9920 protein_coding protein_coding MGP_NODShiLtJ_T0040665.1 MGP_NODShiLtJ_G0021689.1 mouse_genomes_project 15 63358050 63375426 - MGP_NODShiLtJ_P0040665 Gm9920 protein_coding protein_coding MGP_NODShiLtJ_T0040666.1 MGP_NODShiLtJ_G0021689.1 mouse_genomes_project 15 63372241 63375643 - Gm9920 protein_coding processed_transcript MGP_NODShiLtJ_T0040667.1 MGP_NODShiLtJ_G0021689.1 mouse_genomes_project 15 63373828 63375426 - Gm9920 protein_coding retained_intron MGP_NODShiLtJ_T0041232.1 MGP_NODShiLtJ_G0021849.1 mouse_genomes_project 15 87691070 87711137 - MGP_NODShiLtJ_P0041232 Zfp251 protein_coding protein_coding MGP_NODShiLtJ_T0042268.1 MGP_NODShiLtJ_G0022167.1 mouse_genomes_project 15 112835680 112835967 - MGP_NODShiLtJ_P0042268 Gm17349 protein_coding protein_coding MGP_NODShiLtJ_T0041506.1 MGP_NODShiLtJ_G0021932.1 mouse_genomes_project 15 91878712 91907233 + MGP_NODShiLtJ_P0041506 Fam83f protein_coding protein_coding MGP_NODShiLtJ_T0042164.1 MGP_NODShiLtJ_G0022131.1 mouse_genomes_project 15 111594653 111610313 - MGP_NODShiLtJ_P0042164 Adcy6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042165.1 MGP_NODShiLtJ_G0022131.1 mouse_genomes_project 15 111594661 111614873 - MGP_NODShiLtJ_P0042165 Adcy6 protein_coding protein_coding MGP_NODShiLtJ_T0042044.1 MGP_NODShiLtJ_G0022092.1 mouse_genomes_project 15 108369058 108403748 - MGP_NODShiLtJ_P0042044 Dbx2 protein_coding protein_coding MGP_NODShiLtJ_T0097955.1 MGP_NODShiLtJ_G0036367.1 mouse_genomes_project 15 103869723 103869836 - Gm24647 rRNA rRNA MGP_NODShiLtJ_T0009984.1 MGP_NODShiLtJ_G0008117.1 mouse_genomes_project 15 95142519 95142596 + Gm24575 miRNA miRNA MGP_NODShiLtJ_T0006722.1 MGP_NODShiLtJ_G0005538.1 mouse_genomes_project 15 89919960 89923891 - Gm26634 lincRNA lincRNA MGP_NODShiLtJ_T0041755.1 MGP_NODShiLtJ_G0022006.1 mouse_genomes_project 15 96089936 96161384 - MGP_NODShiLtJ_P0041755 1810041L15Rik protein_coding protein_coding MGP_NODShiLtJ_T0041756.1 MGP_NODShiLtJ_G0022006.1 mouse_genomes_project 15 96090778 96159652 - MGP_NODShiLtJ_P0041756 1810041L15Rik protein_coding protein_coding MGP_NODShiLtJ_T0041757.1 MGP_NODShiLtJ_G0022006.1 mouse_genomes_project 15 96128110 96155383 - MGP_NODShiLtJ_P0041757 1810041L15Rik protein_coding protein_coding MGP_NODShiLtJ_T0042475.1 MGP_NODShiLtJ_G0022245.1 mouse_genomes_project 15 115901374 115902936 + MGP_NODShiLtJ_P0042475 Prr13 protein_coding protein_coding MGP_NODShiLtJ_T0042476.1 MGP_NODShiLtJ_G0022245.1 mouse_genomes_project 15 115901521 115905142 + MGP_NODShiLtJ_P0042476 Prr13 protein_coding protein_coding MGP_NODShiLtJ_T0042477.1 MGP_NODShiLtJ_G0022245.1 mouse_genomes_project 15 115901548 115905118 + MGP_NODShiLtJ_P0042477 Prr13 protein_coding protein_coding MGP_NODShiLtJ_T0042478.1 MGP_NODShiLtJ_G0022245.1 mouse_genomes_project 15 115901578 115905120 + MGP_NODShiLtJ_P0042478 Prr13 protein_coding protein_coding MGP_NODShiLtJ_T0042479.1 MGP_NODShiLtJ_G0022245.1 mouse_genomes_project 15 115902430 115905112 + MGP_NODShiLtJ_P0042479 Prr13 protein_coding protein_coding MGP_NODShiLtJ_T0042463.1 MGP_NODShiLtJ_G0022241.1 mouse_genomes_project 15 115766585 115778894 - MGP_NODShiLtJ_P0042463 Aaas protein_coding protein_coding MGP_NODShiLtJ_T0041313.1 MGP_NODShiLtJ_G0021878.1 mouse_genomes_project 15 89576878 89592858 - MGP_NODShiLtJ_P0041313 Rac2 protein_coding protein_coding MGP_NODShiLtJ_T0042403.1 MGP_NODShiLtJ_G0022214.1 mouse_genomes_project 15 115080920 115086649 - MGP_NODShiLtJ_P0042403 Krt5 protein_coding protein_coding MGP_NODShiLtJ_T0012981.1 MGP_NODShiLtJ_G0011089.1 mouse_genomes_project 15 97305361 97305769 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042425.1 MGP_NODShiLtJ_G0022231.1 mouse_genomes_project 15 115549462 115554595 + MGP_NODShiLtJ_P0042425 Igfbp6 protein_coding protein_coding MGP_NODShiLtJ_T0040606.1 MGP_NODShiLtJ_G0021663.1 mouse_genomes_project 15 48988033 48991348 - MGP_NODShiLtJ_P0040606 Tmem74 protein_coding protein_coding MGP_NODShiLtJ_T0040994.1 MGP_NODShiLtJ_G0021798.1 mouse_genomes_project 15 86594845 86598363 - MGP_NODShiLtJ_P0040994 Naprt protein_coding protein_coding MGP_NODShiLtJ_T0040477.1 MGP_NODShiLtJ_G0021616.1 mouse_genomes_project 15 37978169 37988473 - MGP_NODShiLtJ_P0040477 9430069I07Rik protein_coding protein_coding MGP_NODShiLtJ_T0042402.1 MGP_NODShiLtJ_G0022213.1 mouse_genomes_project 15 114982403 114987980 - MGP_NODShiLtJ_P0042402 Gm5414 protein_coding protein_coding MGP_NODShiLtJ_T0041861.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101131965 101162002 - MGP_NODShiLtJ_P0041861 Tubgcp6 protein_coding protein_coding MGP_NODShiLtJ_T0041862.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101132706 101134707 - Tubgcp6 protein_coding retained_intron MGP_NODShiLtJ_T0041863.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101134018 101136212 - MGP_NODShiLtJ_P0041863 Tubgcp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041864.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101134018 101161801 - MGP_NODShiLtJ_P0041864 Tubgcp6 protein_coding protein_coding MGP_NODShiLtJ_T0041865.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101134042 101135152 - Tubgcp6 protein_coding retained_intron MGP_NODShiLtJ_T0041866.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101134301 101134888 - Tubgcp6 protein_coding retained_intron MGP_NODShiLtJ_T0041867.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101134325 101135623 - MGP_NODShiLtJ_P0041867 Tubgcp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041868.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101134620 101135789 - Tubgcp6 protein_coding retained_intron MGP_NODShiLtJ_T0041869.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101135084 101135981 - MGP_NODShiLtJ_P0041869 Tubgcp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041870.1 MGP_NODShiLtJ_G0022045.1 mouse_genomes_project 15 101137824 101141038 - MGP_NODShiLtJ_P0041870 Tubgcp6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041782.1 MGP_NODShiLtJ_G0022019.1 mouse_genomes_project 15 97119717 97257030 + MGP_NODShiLtJ_P0041782 Atxn10 protein_coding protein_coding MGP_NODShiLtJ_T0098905.1 MGP_NODShiLtJ_G0037299.1 mouse_genomes_project 15 82791875 82791937 - Gm24390 snRNA snRNA MGP_NODShiLtJ_T0041267.1 MGP_NODShiLtJ_G0021863.1 mouse_genomes_project 15 88830019 88830673 - Txn2 protein_coding processed_transcript MGP_NODShiLtJ_T0041268.1 MGP_NODShiLtJ_G0021863.1 mouse_genomes_project 15 88830019 88844076 - MGP_NODShiLtJ_P0041268 Txn2 protein_coding protein_coding MGP_NODShiLtJ_T0041269.1 MGP_NODShiLtJ_G0021863.1 mouse_genomes_project 15 88830019 88845237 - MGP_NODShiLtJ_P0041269 Txn2 protein_coding protein_coding MGP_NODShiLtJ_T0041270.1 MGP_NODShiLtJ_G0021863.1 mouse_genomes_project 15 88830176 88843959 - MGP_NODShiLtJ_P0041270 Txn2 protein_coding protein_coding MGP_NODShiLtJ_T0041271.1 MGP_NODShiLtJ_G0021863.1 mouse_genomes_project 15 88830182 88845199 - MGP_NODShiLtJ_P0041271 Txn2 protein_coding protein_coding MGP_NODShiLtJ_T0041272.1 MGP_NODShiLtJ_G0021863.1 mouse_genomes_project 15 88834500 88843966 - MGP_NODShiLtJ_P0041272 Txn2 protein_coding protein_coding MGP_NODShiLtJ_T0041273.1 MGP_NODShiLtJ_G0021863.1 mouse_genomes_project 15 88838806 88845205 - MGP_NODShiLtJ_P0041273 Txn2 protein_coding protein_coding MGP_NODShiLtJ_T0041274.1 MGP_NODShiLtJ_G0021863.1 mouse_genomes_project 15 88842628 88845228 - MGP_NODShiLtJ_P0041274 Txn2 protein_coding protein_coding MGP_NODShiLtJ_T0041947.1 MGP_NODShiLtJ_G0022066.1 mouse_genomes_project 15 101552186 101557136 - MGP_NODShiLtJ_P0041947 Arsa protein_coding protein_coding MGP_NODShiLtJ_T0041948.1 MGP_NODShiLtJ_G0022066.1 mouse_genomes_project 15 101552238 101555824 - Arsa protein_coding retained_intron MGP_NODShiLtJ_T0041949.1 MGP_NODShiLtJ_G0022066.1 mouse_genomes_project 15 101552950 101553982 - MGP_NODShiLtJ_P0041949 Arsa protein_coding protein_coding MGP_NODShiLtJ_T0041950.1 MGP_NODShiLtJ_G0022066.1 mouse_genomes_project 15 101555941 101557122 - Arsa protein_coding processed_transcript MGP_NODShiLtJ_T0040166.1 MGP_NODShiLtJ_G0021520.1 mouse_genomes_project 15 147773 156773 + MGP_NODShiLtJ_P0040166 protein_coding protein_coding MGP_NODShiLtJ_T0040167.1 MGP_NODShiLtJ_G0021520.1 mouse_genomes_project 15 149996 162531 + MGP_NODShiLtJ_P0040167 protein_coding protein_coding MGP_NODShiLtJ_T0040168.1 MGP_NODShiLtJ_G0021520.1 mouse_genomes_project 15 150040 156726 + MGP_NODShiLtJ_P0040168 protein_coding protein_coding MGP_NODShiLtJ_T0040169.1 MGP_NODShiLtJ_G0021520.1 mouse_genomes_project 15 150150 162530 + MGP_NODShiLtJ_P0040169 protein_coding protein_coding MGP_NODShiLtJ_T0040170.1 MGP_NODShiLtJ_G0021520.1 mouse_genomes_project 15 150227 156655 + MGP_NODShiLtJ_P0040170 protein_coding protein_coding MGP_NODShiLtJ_T0040171.1 MGP_NODShiLtJ_G0021520.1 mouse_genomes_project 15 150228 156113 + protein_coding retained_intron MGP_NODShiLtJ_T0040172.1 MGP_NODShiLtJ_G0021520.1 mouse_genomes_project 15 153075 158262 + MGP_NODShiLtJ_P0040172 protein_coding protein_coding MGP_NODShiLtJ_T0003572.1 MGP_NODShiLtJ_G0003232.1 mouse_genomes_project 15 110689301 110691463 + Rapgef3os2 antisense antisense MGP_NODShiLtJ_T0098482.1 MGP_NODShiLtJ_G0036880.1 mouse_genomes_project 15 100924893 100926635 - Gm20621 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0098483.1 MGP_NODShiLtJ_G0036880.1 mouse_genomes_project 15 100925626 100926644 - Gm20621 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0098484.1 MGP_NODShiLtJ_G0036880.1 mouse_genomes_project 15 100925631 100926602 - Gm20621 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0000920.1 MGP_NODShiLtJ_G0000849.1 mouse_genomes_project 15 77929999 77935450 - TEC TEC MGP_NODShiLtJ_T0040408.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28134079 28340158 + MGP_NODShiLtJ_P0040408 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040409.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28134097 28306254 + MGP_NODShiLtJ_P0040409 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040410.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28134103 28219552 + Myo10 protein_coding retained_intron MGP_NODShiLtJ_T0040411.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28188290 28242826 + Myo10 protein_coding processed_transcript MGP_NODShiLtJ_T0040412.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28231470 28242877 + Myo10 protein_coding retained_intron MGP_NODShiLtJ_T0040413.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28261343 28307684 + MGP_NODShiLtJ_P0040413 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040414.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28275446 28340156 + MGP_NODShiLtJ_P0040414 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040415.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28275515 28306264 + MGP_NODShiLtJ_P0040415 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040416.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28281301 28300976 + MGP_NODShiLtJ_P0040416 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040417.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28281321 28306899 + MGP_NODShiLtJ_P0040417 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040418.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28293435 28301225 + MGP_NODShiLtJ_P0040418 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040419.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28298866 28307547 + MGP_NODShiLtJ_P0040419 Myo10 protein_coding protein_coding MGP_NODShiLtJ_T0040420.1 MGP_NODShiLtJ_G0021589.1 mouse_genomes_project 15 28306679 28307858 + Myo10 protein_coding retained_intron MGP_NODShiLtJ_T0003563.1 MGP_NODShiLtJ_G0003225.1 mouse_genomes_project 15 92664356 92667985 - Gm17025 antisense antisense MGP_NODShiLtJ_T0042149.1 MGP_NODShiLtJ_G0022126.1 mouse_genomes_project 15 111465196 111467477 - MGP_NODShiLtJ_P0042149 Lalba protein_coding protein_coding MGP_NODShiLtJ_T0040378.1 MGP_NODShiLtJ_G0021578.1 mouse_genomes_project 15 10942635 10960037 - MGP_NODShiLtJ_P0040378 6030458C11Rik protein_coding protein_coding MGP_NODShiLtJ_T0040885.1 MGP_NODShiLtJ_G0021760.1 mouse_genomes_project 15 84157954 84231325 - MGP_NODShiLtJ_P0040885 Mroh5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040886.1 MGP_NODShiLtJ_G0021760.1 mouse_genomes_project 15 84178549 84181118 - Mroh5 protein_coding processed_transcript MGP_NODShiLtJ_T0040887.1 MGP_NODShiLtJ_G0021760.1 mouse_genomes_project 15 84184642 84239987 - MGP_NODShiLtJ_P0040887 Mroh5 protein_coding protein_coding MGP_NODShiLtJ_T0040888.1 MGP_NODShiLtJ_G0021760.1 mouse_genomes_project 15 84185166 84218334 - MGP_NODShiLtJ_P0040888 Mroh5 protein_coding protein_coding MGP_NODShiLtJ_T0040889.1 MGP_NODShiLtJ_G0021760.1 mouse_genomes_project 15 84196334 84240015 - Mroh5 protein_coding retained_intron MGP_NODShiLtJ_T0040908.1 MGP_NODShiLtJ_G0021764.1 mouse_genomes_project 15 85105580 85109066 - MGP_NODShiLtJ_P0040908 Arc protein_coding protein_coding MGP_NODShiLtJ_T0040909.1 MGP_NODShiLtJ_G0021764.1 mouse_genomes_project 15 85105580 85109068 - MGP_NODShiLtJ_P0040909 Arc protein_coding protein_coding MGP_NODShiLtJ_T0009956.1 MGP_NODShiLtJ_G0008089.1 mouse_genomes_project 15 71589306 71589376 - Gm24810 miRNA miRNA MGP_NODShiLtJ_T0041237.1 MGP_NODShiLtJ_G0021853.1 mouse_genomes_project 15 87758825 87779812 - MGP_NODShiLtJ_P0041237 Zfp647 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041338.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90014854 90036308 + Triobp protein_coding processed_transcript MGP_NODShiLtJ_T0041339.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90014854 90073714 + MGP_NODShiLtJ_P0041339 Triobp protein_coding protein_coding MGP_NODShiLtJ_T0041340.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90014854 90074016 + MGP_NODShiLtJ_P0041340 Triobp protein_coding protein_coding MGP_NODShiLtJ_T0041341.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90015375 90020423 + Triobp protein_coding retained_intron MGP_NODShiLtJ_T0041342.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90051160 90074013 + MGP_NODShiLtJ_P0041342 Triobp protein_coding protein_coding MGP_NODShiLtJ_T0041343.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90051175 90074011 + MGP_NODShiLtJ_P0041343 Triobp protein_coding protein_coding MGP_NODShiLtJ_T0041344.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90051197 90063029 + MGP_NODShiLtJ_P0041344 Triobp protein_coding protein_coding MGP_NODShiLtJ_T0041345.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90051845 90059609 + MGP_NODShiLtJ_P0041345 Triobp protein_coding protein_coding MGP_NODShiLtJ_T0041346.1 MGP_NODShiLtJ_G0021889.1 mouse_genomes_project 15 90070350 90072866 + Triobp protein_coding processed_transcript MGP_NODShiLtJ_T0040579.1 MGP_NODShiLtJ_G0021649.1 mouse_genomes_project 15 43186994 43205425 - MGP_NODShiLtJ_P0040579 Slc25a32 protein_coding protein_coding MGP_NODShiLtJ_T0041602.1 MGP_NODShiLtJ_G0021954.1 mouse_genomes_project 15 93173394 93216786 + MGP_NODShiLtJ_P0041602 Aco2 protein_coding protein_coding MGP_NODShiLtJ_T0041603.1 MGP_NODShiLtJ_G0021954.1 mouse_genomes_project 15 93173569 93191444 + Aco2 protein_coding retained_intron MGP_NODShiLtJ_T0041604.1 MGP_NODShiLtJ_G0021954.1 mouse_genomes_project 15 93173569 93191445 + Aco2 protein_coding processed_transcript MGP_NODShiLtJ_T0041605.1 MGP_NODShiLtJ_G0021954.1 mouse_genomes_project 15 93208745 93212164 + Aco2 protein_coding retained_intron MGP_NODShiLtJ_T0041606.1 MGP_NODShiLtJ_G0021954.1 mouse_genomes_project 15 93209025 93211818 + Aco2 protein_coding retained_intron MGP_NODShiLtJ_T0041607.1 MGP_NODShiLtJ_G0021954.1 mouse_genomes_project 15 93211943 93214946 + Aco2 protein_coding retained_intron MGP_NODShiLtJ_T0040731.1 MGP_NODShiLtJ_G0021714.1 mouse_genomes_project 15 67497512 67510674 + MGP_NODShiLtJ_P0040731 Rnf139 protein_coding protein_coding MGP_NODShiLtJ_T0098915.1 MGP_NODShiLtJ_G0037309.1 mouse_genomes_project 15 94725114 94725265 + Rnu12 snRNA snRNA MGP_NODShiLtJ_T0009990.1 MGP_NODShiLtJ_G0008123.1 mouse_genomes_project 15 99752825 99752919 - Mir6393 miRNA miRNA MGP_NODShiLtJ_T0006688.1 MGP_NODShiLtJ_G0005516.1 mouse_genomes_project 15 35600851 35601507 + 4930518I17Rik lincRNA lincRNA MGP_NODShiLtJ_T0012969.1 MGP_NODShiLtJ_G0011077.1 mouse_genomes_project 15 85166730 85166874 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040931.1 MGP_NODShiLtJ_G0021778.1 mouse_genomes_project 15 85301189 85316712 - MGP_NODShiLtJ_P0040931 Cyp11b2 protein_coding protein_coding MGP_NODShiLtJ_T0040975.1 MGP_NODShiLtJ_G0021790.1 mouse_genomes_project 15 86258111 86259697 + MGP_NODShiLtJ_P0040975 Gpihbp1 protein_coding protein_coding MGP_NODShiLtJ_T0040976.1 MGP_NODShiLtJ_G0021790.1 mouse_genomes_project 15 86258113 86259697 + MGP_NODShiLtJ_P0040976 Gpihbp1 protein_coding protein_coding MGP_NODShiLtJ_T0040977.1 MGP_NODShiLtJ_G0021790.1 mouse_genomes_project 15 86258137 86260965 + MGP_NODShiLtJ_P0040977 Gpihbp1 protein_coding protein_coding MGP_NODShiLtJ_T0040978.1 MGP_NODShiLtJ_G0021790.1 mouse_genomes_project 15 86258151 86259428 + Gpihbp1 protein_coding retained_intron MGP_NODShiLtJ_T0040979.1 MGP_NODShiLtJ_G0021790.1 mouse_genomes_project 15 86258151 86259672 + Gpihbp1 protein_coding retained_intron MGP_NODShiLtJ_T0041178.1 MGP_NODShiLtJ_G0021837.1 mouse_genomes_project 15 87419044 87427723 - MGP_NODShiLtJ_P0041178 Slc39a4 protein_coding protein_coding MGP_NODShiLtJ_T0009980.1 MGP_NODShiLtJ_G0008113.1 mouse_genomes_project 15 94128161 94128221 - Gm27742 miRNA miRNA MGP_NODShiLtJ_T0009976.1 MGP_NODShiLtJ_G0008109.1 mouse_genomes_project 15 93528876 93528945 + Mir33 miRNA miRNA MGP_NODShiLtJ_T0017297.1 MGP_NODShiLtJ_G0015158.1 mouse_genomes_project 15 1010047 1014427 - BC037032 processed_transcript TEC MGP_NODShiLtJ_T0017298.1 MGP_NODShiLtJ_G0015158.1 mouse_genomes_project 15 1011619 1017325 - BC037032 processed_transcript antisense MGP_NODShiLtJ_T0017299.1 MGP_NODShiLtJ_G0015158.1 mouse_genomes_project 15 1012304 1017334 - BC037032 processed_transcript antisense MGP_NODShiLtJ_T0017300.1 MGP_NODShiLtJ_G0015158.1 mouse_genomes_project 15 1012908 1017337 - BC037032 processed_transcript antisense MGP_NODShiLtJ_T0017301.1 MGP_NODShiLtJ_G0015158.1 mouse_genomes_project 15 1013504 1016012 - BC037032 processed_transcript antisense MGP_NODShiLtJ_T0017302.1 MGP_NODShiLtJ_G0015158.1 mouse_genomes_project 15 1016332 1017084 - BC037032 processed_transcript antisense MGP_NODShiLtJ_T0100160.1 MGP_NODShiLtJ_G0038554.1 mouse_genomes_project 15 37908184 37908235 - Gm25809 snoRNA snoRNA MGP_NODShiLtJ_T0042526.1 MGP_NODShiLtJ_G0022254.1 mouse_genomes_project 15 116169766 116186338 - MGP_NODShiLtJ_P0042526 Calcoco1 protein_coding protein_coding MGP_NODShiLtJ_T0042527.1 MGP_NODShiLtJ_G0022254.1 mouse_genomes_project 15 116169959 116172895 - MGP_NODShiLtJ_P0042527 Calcoco1 protein_coding protein_coding MGP_NODShiLtJ_T0042528.1 MGP_NODShiLtJ_G0022254.1 mouse_genomes_project 15 116170574 116186291 - MGP_NODShiLtJ_P0042528 Calcoco1 protein_coding protein_coding MGP_NODShiLtJ_T0042529.1 MGP_NODShiLtJ_G0022254.1 mouse_genomes_project 15 116174308 116179924 - Calcoco1 protein_coding retained_intron MGP_NODShiLtJ_T0100153.1 MGP_NODShiLtJ_G0038547.1 mouse_genomes_project 15 32992381 32992515 - Gm23033 snoRNA snoRNA MGP_NODShiLtJ_T0041852.1 MGP_NODShiLtJ_G0022043.1 mouse_genomes_project 15 101107873 101119016 + MGP_NODShiLtJ_P0041852 Trabd protein_coding protein_coding MGP_NODShiLtJ_T0041853.1 MGP_NODShiLtJ_G0022043.1 mouse_genomes_project 15 101108761 101120784 + MGP_NODShiLtJ_P0041853 Trabd protein_coding protein_coding MGP_NODShiLtJ_T0041854.1 MGP_NODShiLtJ_G0022043.1 mouse_genomes_project 15 101108820 101120778 + MGP_NODShiLtJ_P0041854 Trabd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041855.1 MGP_NODShiLtJ_G0022043.1 mouse_genomes_project 15 101108842 101119837 + MGP_NODShiLtJ_P0041855 Trabd protein_coding protein_coding MGP_NODShiLtJ_T0041856.1 MGP_NODShiLtJ_G0022043.1 mouse_genomes_project 15 101108872 101119840 + MGP_NODShiLtJ_P0041856 Trabd protein_coding protein_coding MGP_NODShiLtJ_T0041857.1 MGP_NODShiLtJ_G0022043.1 mouse_genomes_project 15 101116235 101120778 + Trabd protein_coding retained_intron MGP_NODShiLtJ_T0041858.1 MGP_NODShiLtJ_G0022043.1 mouse_genomes_project 15 101118415 101119331 + Trabd protein_coding retained_intron MGP_NODShiLtJ_T0041770.1 MGP_NODShiLtJ_G0022011.1 mouse_genomes_project 15 96655305 96664820 - MGP_NODShiLtJ_P0041770 Gm29666 protein_coding protein_coding MGP_NODShiLtJ_T0041822.1 MGP_NODShiLtJ_G0022031.1 mouse_genomes_project 15 98074969 98361212 + MGP_NODShiLtJ_P0041822 Tbc1d22a protein_coding protein_coding MGP_NODShiLtJ_T0042472.1 MGP_NODShiLtJ_G0022244.1 mouse_genomes_project 15 115885923 115895133 + MGP_NODShiLtJ_P0042472 Amhr2 protein_coding protein_coding MGP_NODShiLtJ_T0042473.1 MGP_NODShiLtJ_G0022244.1 mouse_genomes_project 15 115892669 115895048 + MGP_NODShiLtJ_P0042473 Amhr2 protein_coding protein_coding MGP_NODShiLtJ_T0042474.1 MGP_NODShiLtJ_G0022244.1 mouse_genomes_project 15 115892833 115893382 + Amhr2 protein_coding retained_intron MGP_NODShiLtJ_T0042178.1 MGP_NODShiLtJ_G0022136.1 mouse_genomes_project 15 111754913 111758739 - MGP_NODShiLtJ_P0042178 Fkbp11 protein_coding protein_coding MGP_NODShiLtJ_T0006734.1 MGP_NODShiLtJ_G0005546.1 mouse_genomes_project 15 97442461 97448593 + D130051D11Rik lincRNA lincRNA MGP_NODShiLtJ_T0101286.1 MGP_NODShiLtJ_G0039557.1 mouse_genomes_project 15 86047251 86051475 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101287.1 MGP_NODShiLtJ_G0039557.1 mouse_genomes_project 15 86047611 86051082 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0009978.1 MGP_NODShiLtJ_G0008111.1 mouse_genomes_project 15 93788303 93788389 + Gm25990 miRNA miRNA MGP_NODShiLtJ_T0011284.1 MGP_NODShiLtJ_G0009417.1 mouse_genomes_project 15 103934746 103935032 - Gm25389 misc_RNA misc_RNA MGP_NODShiLtJ_T0042048.1 MGP_NODShiLtJ_G0022095.1 mouse_genomes_project 15 108590630 108596076 - MGP_NODShiLtJ_P0042048 Gm17546 protein_coding protein_coding MGP_NODShiLtJ_T0041775.1 MGP_NODShiLtJ_G0022014.1 mouse_genomes_project 15 96773471 96778894 + MGP_NODShiLtJ_P0041775 Upk3a protein_coding protein_coding MGP_NODShiLtJ_T0042535.1 MGP_NODShiLtJ_G0022260.1 mouse_genomes_project 15 116455806 116461028 + MGP_NODShiLtJ_P0042535 Hoxc9 protein_coding protein_coding MGP_NODShiLtJ_T0042536.1 MGP_NODShiLtJ_G0022260.1 mouse_genomes_project 15 116456399 116464394 + MGP_NODShiLtJ_P0042536 Hoxc9 protein_coding protein_coding MGP_NODShiLtJ_T0041316.1 MGP_NODShiLtJ_G0021881.1 mouse_genomes_project 15 89787139 89806111 - MGP_NODShiLtJ_P0041316 Mfng protein_coding protein_coding MGP_NODShiLtJ_T0041317.1 MGP_NODShiLtJ_G0021881.1 mouse_genomes_project 15 89793088 89799832 - Mfng protein_coding retained_intron MGP_NODShiLtJ_T0041318.1 MGP_NODShiLtJ_G0021881.1 mouse_genomes_project 15 89796521 89799806 - Mfng protein_coding retained_intron MGP_NODShiLtJ_T0041319.1 MGP_NODShiLtJ_G0021881.1 mouse_genomes_project 15 89799517 89804530 - Mfng protein_coding processed_transcript MGP_NODShiLtJ_T0040495.1 MGP_NODShiLtJ_G0021621.1 mouse_genomes_project 15 38210916 38345485 - MGP_NODShiLtJ_P0040495 Nipal2 protein_coding protein_coding MGP_NODShiLtJ_T0012988.1 MGP_NODShiLtJ_G0011096.1 mouse_genomes_project 15 112339436 112346775 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101426.1 MGP_NODShiLtJ_G0039620.1 mouse_genomes_project 15 86303126 86308433 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101427.1 MGP_NODShiLtJ_G0039620.1 mouse_genomes_project 15 86303472 86305477 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101428.1 MGP_NODShiLtJ_G0039620.1 mouse_genomes_project 15 86303481 86314970 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101429.1 MGP_NODShiLtJ_G0039620.1 mouse_genomes_project 15 86304483 86307963 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0101430.1 MGP_NODShiLtJ_G0039620.1 mouse_genomes_project 15 86305496 86307728 + unitary_pseudogene retained_intron MGP_NODShiLtJ_T0101431.1 MGP_NODShiLtJ_G0039620.1 mouse_genomes_project 15 86305660 86307481 + unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0040625.1 MGP_NODShiLtJ_G0021672.1 mouse_genomes_project 15 58224939 58534390 - MGP_NODShiLtJ_P0040625 Trps1 protein_coding protein_coding MGP_NODShiLtJ_T0040626.1 MGP_NODShiLtJ_G0021672.1 mouse_genomes_project 15 58228598 58534412 - MGP_NODShiLtJ_P0040626 Trps1 protein_coding protein_coding MGP_NODShiLtJ_T0040627.1 MGP_NODShiLtJ_G0021672.1 mouse_genomes_project 15 58228616 58533756 - MGP_NODShiLtJ_P0040627 Trps1 protein_coding protein_coding MGP_NODShiLtJ_T0040628.1 MGP_NODShiLtJ_G0021672.1 mouse_genomes_project 15 58230621 58533753 - MGP_NODShiLtJ_P0040628 Trps1 protein_coding protein_coding MGP_NODShiLtJ_T0040629.1 MGP_NODShiLtJ_G0021672.1 mouse_genomes_project 15 58230622 58527936 - MGP_NODShiLtJ_P0040629 Trps1 protein_coding protein_coding MGP_NODShiLtJ_T0040630.1 MGP_NODShiLtJ_G0021672.1 mouse_genomes_project 15 58230638 58535821 - MGP_NODShiLtJ_P0040630 Trps1 protein_coding protein_coding MGP_NODShiLtJ_T0040631.1 MGP_NODShiLtJ_G0021672.1 mouse_genomes_project 15 58460326 58468351 - MGP_NODShiLtJ_P0040631 Trps1 protein_coding protein_coding MGP_NODShiLtJ_T0040632.1 MGP_NODShiLtJ_G0021672.1 mouse_genomes_project 15 58489008 58536243 - MGP_NODShiLtJ_P0040632 Trps1 protein_coding protein_coding MGP_NODShiLtJ_T0009940.1 MGP_NODShiLtJ_G0008073.1 mouse_genomes_project 15 23332120 23332289 - Gm44373 miRNA miRNA MGP_NODShiLtJ_T0040785.1 MGP_NODShiLtJ_G0021732.1 mouse_genomes_project 15 73920914 74178790 - MGP_NODShiLtJ_P0040785 Adcy8 protein_coding protein_coding MGP_NODShiLtJ_T0042202.1 MGP_NODShiLtJ_G0022146.1 mouse_genomes_project 15 112008638 112012399 - MGP_NODShiLtJ_P0042202 protein_coding protein_coding MGP_NODShiLtJ_T0017315.1 MGP_NODShiLtJ_G0015163.1 mouse_genomes_project 15 66760480 66873282 + Gm15943 processed_transcript processed_transcript MGP_NODShiLtJ_T0040346.1 MGP_NODShiLtJ_G0021570.1 mouse_genomes_project 15 9350135 9366109 - MGP_NODShiLtJ_P0040346 Tars protein_coding protein_coding MGP_NODShiLtJ_T0040173.1 MGP_NODShiLtJ_G0021521.1 mouse_genomes_project 15 162649 189514 - MGP_NODShiLtJ_P0040173 Ccdc152 protein_coding protein_coding MGP_NODShiLtJ_T0042552.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116741820 116750201 - MGP_NODShiLtJ_P0042552 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042553.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116741825 116745101 - MGP_NODShiLtJ_P0042553 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042554.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116741825 116745050 - MGP_NODShiLtJ_P0042554 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042555.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116741828 116745261 - MGP_NODShiLtJ_P0042555 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042556.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116741883 116745100 - MGP_NODShiLtJ_P0042556 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042557.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116742561 116746737 - MGP_NODShiLtJ_P0042557 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042558.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116742613 116747637 - MGP_NODShiLtJ_P0042558 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042559.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116742675 116745272 - MGP_NODShiLtJ_P0042559 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042560.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116742845 116746395 - MGP_NODShiLtJ_P0042560 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042561.1 MGP_NODShiLtJ_G0022267.1 mouse_genomes_project 15 116742955 116753160 - MGP_NODShiLtJ_P0042561 Nfe2 protein_coding protein_coding MGP_NODShiLtJ_T0042207.1 MGP_NODShiLtJ_G0022150.1 mouse_genomes_project 15 112163445 112166569 - MGP_NODShiLtJ_P0042207 C1ql4 protein_coding protein_coding MGP_NODShiLtJ_T0098280.1 MGP_NODShiLtJ_G0036688.1 mouse_genomes_project 15 83127143 83131857 - Peg13 sense_intronic sense_intronic MGP_NODShiLtJ_T0042053.1 MGP_NODShiLtJ_G0022097.1 mouse_genomes_project 15 109216123 109274374 - MGP_NODShiLtJ_P0042053 Scaf11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042054.1 MGP_NODShiLtJ_G0022097.1 mouse_genomes_project 15 109216125 109274426 - MGP_NODShiLtJ_P0042054 Scaf11 protein_coding protein_coding MGP_NODShiLtJ_T0041406.1 MGP_NODShiLtJ_G0021903.1 mouse_genomes_project 15 90456686 90501649 - MGP_NODShiLtJ_P0041406 Tmem184b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041407.1 MGP_NODShiLtJ_G0021903.1 mouse_genomes_project 15 90458076 90501683 - MGP_NODShiLtJ_P0041407 Tmem184b protein_coding protein_coding MGP_NODShiLtJ_T0041408.1 MGP_NODShiLtJ_G0021903.1 mouse_genomes_project 15 90458076 90501299 - MGP_NODShiLtJ_P0041408 Tmem184b protein_coding protein_coding MGP_NODShiLtJ_T0009964.1 MGP_NODShiLtJ_G0008097.1 mouse_genomes_project 15 87038655 87038745 - Mir3079 miRNA miRNA MGP_NODShiLtJ_T0042248.1 MGP_NODShiLtJ_G0022161.1 mouse_genomes_project 15 112608461 112640773 - MGP_NODShiLtJ_P0042248 Faim2 protein_coding protein_coding MGP_NODShiLtJ_T0003536.1 MGP_NODShiLtJ_G0003205.1 mouse_genomes_project 15 2347287 2361439 - Gm15938 antisense antisense MGP_NODShiLtJ_T0041879.1 MGP_NODShiLtJ_G0022047.1 mouse_genomes_project 15 101169614 101180967 - MGP_NODShiLtJ_P0041879 Mapk12 protein_coding protein_coding MGP_NODShiLtJ_T0041493.1 MGP_NODShiLtJ_G0021925.1 mouse_genomes_project 15 91334454 91384180 + MGP_NODShiLtJ_P0041493 Mgat3 protein_coding protein_coding MGP_NODShiLtJ_T0041149.1 MGP_NODShiLtJ_G0021830.1 mouse_genomes_project 15 87257599 87283282 + MGP_NODShiLtJ_P0041149 Hsf1 protein_coding protein_coding MGP_NODShiLtJ_T0041150.1 MGP_NODShiLtJ_G0021830.1 mouse_genomes_project 15 87257755 87284227 + MGP_NODShiLtJ_P0041150 Hsf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000915.1 MGP_NODShiLtJ_G0000844.1 mouse_genomes_project 15 21053866 21054747 - TEC TEC MGP_NODShiLtJ_T0100189.1 MGP_NODShiLtJ_G0038583.1 mouse_genomes_project 15 111524199 111524336 - Snora2b snoRNA snoRNA MGP_NODShiLtJ_T0042522.1 MGP_NODShiLtJ_G0022253.1 mouse_genomes_project 15 116122884 116131141 - MGP_NODShiLtJ_P0042522 Atp5g2 protein_coding protein_coding MGP_NODShiLtJ_T0042523.1 MGP_NODShiLtJ_G0022253.1 mouse_genomes_project 15 116123034 116127767 - MGP_NODShiLtJ_P0042523 Atp5g2 protein_coding protein_coding MGP_NODShiLtJ_T0042524.1 MGP_NODShiLtJ_G0022253.1 mouse_genomes_project 15 116124764 116127761 - MGP_NODShiLtJ_P0042524 Atp5g2 protein_coding protein_coding MGP_NODShiLtJ_T0042525.1 MGP_NODShiLtJ_G0022253.1 mouse_genomes_project 15 116125826 116132367 - MGP_NODShiLtJ_P0042525 Atp5g2 protein_coding protein_coding MGP_NODShiLtJ_T0040435.1 MGP_NODShiLtJ_G0021599.1 mouse_genomes_project 15 33313737 34261667 + MGP_NODShiLtJ_P0040435 Ctnnd2 protein_coding protein_coding MGP_NODShiLtJ_T0003568.1 MGP_NODShiLtJ_G0003230.1 mouse_genomes_project 15 101555946 101565017 + C230037L18Rik antisense antisense MGP_NODShiLtJ_T0003569.1 MGP_NODShiLtJ_G0003230.1 mouse_genomes_project 15 101555962 101558083 + C230037L18Rik antisense antisense MGP_NODShiLtJ_T0003570.1 MGP_NODShiLtJ_G0003230.1 mouse_genomes_project 15 101557908 101564952 + C230037L18Rik antisense antisense MGP_NODShiLtJ_T0098898.1 MGP_NODShiLtJ_G0037292.1 mouse_genomes_project 15 63538543 63538605 - Gm26296 snRNA snRNA MGP_NODShiLtJ_T0041404.1 MGP_NODShiLtJ_G0021902.1 mouse_genomes_project 15 90441922 90456466 + MGP_NODShiLtJ_P0041404 Maff protein_coding protein_coding MGP_NODShiLtJ_T0041405.1 MGP_NODShiLtJ_G0021902.1 mouse_genomes_project 15 90442442 90456466 + MGP_NODShiLtJ_P0041405 Maff protein_coding protein_coding MGP_NODShiLtJ_T0041559.1 MGP_NODShiLtJ_G0021944.1 mouse_genomes_project 15 92756463 92756928 - MGP_NODShiLtJ_P0041559 Gm5218 protein_coding protein_coding MGP_NODShiLtJ_T0041077.1 MGP_NODShiLtJ_G0021817.1 mouse_genomes_project 15 87042142 87044605 + MGP_NODShiLtJ_P0041077 Smpd5 protein_coding protein_coding MGP_NODShiLtJ_T0041078.1 MGP_NODShiLtJ_G0021817.1 mouse_genomes_project 15 87042676 87043961 + MGP_NODShiLtJ_P0041078 Smpd5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041079.1 MGP_NODShiLtJ_G0021817.1 mouse_genomes_project 15 87042959 87044602 + Smpd5 protein_coding retained_intron MGP_NODShiLtJ_T0041080.1 MGP_NODShiLtJ_G0021817.1 mouse_genomes_project 15 87043017 87043582 + Smpd5 protein_coding retained_intron MGP_NODShiLtJ_T0041651.1 MGP_NODShiLtJ_G0021969.1 mouse_genomes_project 15 93640755 93656355 + MGP_NODShiLtJ_P0041651 Wbp2nl protein_coding protein_coding MGP_NODShiLtJ_T0041772.1 MGP_NODShiLtJ_G0022013.1 mouse_genomes_project 15 96691896 96739545 - MGP_NODShiLtJ_P0041772 5031439G07Rik protein_coding protein_coding MGP_NODShiLtJ_T0041773.1 MGP_NODShiLtJ_G0022013.1 mouse_genomes_project 15 96695938 96708911 - 5031439G07Rik protein_coding retained_intron MGP_NODShiLtJ_T0041774.1 MGP_NODShiLtJ_G0022013.1 mouse_genomes_project 15 96703610 96741771 - 5031439G07Rik protein_coding processed_transcript MGP_NODShiLtJ_T0042383.1 MGP_NODShiLtJ_G0022200.1 mouse_genomes_project 15 114566047 114573875 + MGP_NODShiLtJ_P0042383 Nr4a1 protein_coding protein_coding MGP_NODShiLtJ_T0098918.1 MGP_NODShiLtJ_G0037312.1 mouse_genomes_project 15 100866490 100866597 + Gm23144 snRNA snRNA MGP_NODShiLtJ_T0040320.1 MGP_NODShiLtJ_G0021560.1 mouse_genomes_project 15 8334743 8359513 - MGP_NODShiLtJ_P0040320 Dnajc21 protein_coding protein_coding MGP_NODShiLtJ_T0040321.1 MGP_NODShiLtJ_G0021560.1 mouse_genomes_project 15 8334752 8349641 - MGP_NODShiLtJ_P0040321 Dnajc21 protein_coding protein_coding MGP_NODShiLtJ_T0040322.1 MGP_NODShiLtJ_G0021560.1 mouse_genomes_project 15 8334753 8338458 - Dnajc21 protein_coding retained_intron MGP_NODShiLtJ_T0040323.1 MGP_NODShiLtJ_G0021560.1 mouse_genomes_project 15 8335683 8340380 - Dnajc21 protein_coding retained_intron MGP_NODShiLtJ_T0040324.1 MGP_NODShiLtJ_G0021560.1 mouse_genomes_project 15 8341063 8350162 - Dnajc21 protein_coding retained_intron MGP_NODShiLtJ_T0009996.1 MGP_NODShiLtJ_G0008129.1 mouse_genomes_project 15 112159564 112159625 + Mir6960 miRNA miRNA MGP_NODShiLtJ_T0003544.1 MGP_NODShiLtJ_G0003211.1 mouse_genomes_project 15 63719615 63722521 - 1700040F17Rik antisense antisense MGP_NODShiLtJ_T0042564.1 MGP_NODShiLtJ_G0022270.1 mouse_genomes_project 15 116815027 116842079 - MGP_NODShiLtJ_P0042564 Zfp385a protein_coding protein_coding MGP_NODShiLtJ_T0042136.1 MGP_NODShiLtJ_G0022121.1 mouse_genomes_project 15 111305297 111306215 - MGP_NODShiLtJ_P0042136 Olfr284 protein_coding protein_coding MGP_NODShiLtJ_T0042137.1 MGP_NODShiLtJ_G0022121.1 mouse_genomes_project 15 111305297 111306263 - MGP_NODShiLtJ_P0042137 Olfr284 protein_coding protein_coding MGP_NODShiLtJ_T0097949.1 MGP_NODShiLtJ_G0036361.1 mouse_genomes_project 15 33788547 33788666 + Gm23956 rRNA rRNA MGP_NODShiLtJ_T0009953.1 MGP_NODShiLtJ_G0008086.1 mouse_genomes_project 15 52297779 52297841 - Gm23562 miRNA miRNA MGP_NODShiLtJ_T0042438.1 MGP_NODShiLtJ_G0022235.1 mouse_genomes_project 15 115626818 115642752 - MGP_NODShiLtJ_P0042438 Itgb7 protein_coding protein_coding MGP_NODShiLtJ_T0042439.1 MGP_NODShiLtJ_G0022235.1 mouse_genomes_project 15 115635540 115642752 - MGP_NODShiLtJ_P0042439 Itgb7 protein_coding protein_coding MGP_NODShiLtJ_T0040184.1 MGP_NODShiLtJ_G0021523.1 mouse_genomes_project 15 949937 968632 - MGP_NODShiLtJ_P0040184 Fbxo4 protein_coding protein_coding MGP_NODShiLtJ_T0040185.1 MGP_NODShiLtJ_G0021523.1 mouse_genomes_project 15 955902 960162 - Fbxo4 protein_coding processed_transcript MGP_NODShiLtJ_T0040186.1 MGP_NODShiLtJ_G0021523.1 mouse_genomes_project 15 958586 959284 - Fbxo4 protein_coding retained_intron MGP_NODShiLtJ_T0040912.1 MGP_NODShiLtJ_G0021767.1 mouse_genomes_project 15 85169142 85172557 + MGP_NODShiLtJ_P0040912 Them6 protein_coding protein_coding MGP_NODShiLtJ_T0040348.1 MGP_NODShiLtJ_G0021572.1 mouse_genomes_project 15 10056239 10070952 - MGP_NODShiLtJ_P0040348 Sub1 protein_coding protein_coding MGP_NODShiLtJ_T0040349.1 MGP_NODShiLtJ_G0021572.1 mouse_genomes_project 15 10058941 10071877 - MGP_NODShiLtJ_P0040349 Sub1 protein_coding protein_coding MGP_NODShiLtJ_T0040350.1 MGP_NODShiLtJ_G0021572.1 mouse_genomes_project 15 10061034 10070906 - Sub1 protein_coding retained_intron MGP_NODShiLtJ_T0040351.1 MGP_NODShiLtJ_G0021572.1 mouse_genomes_project 15 10061354 10070644 - Sub1 protein_coding processed_transcript MGP_NODShiLtJ_T0041102.1 MGP_NODShiLtJ_G0021821.1 mouse_genomes_project 15 87112237 87114649 + MGP_NODShiLtJ_P0041102 Cyc1 protein_coding protein_coding MGP_NODShiLtJ_T0041570.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92943626 92970587 + MGP_NODShiLtJ_P0041570 L3mbtl2 protein_coding protein_coding MGP_NODShiLtJ_T0041571.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92943671 92970577 + MGP_NODShiLtJ_P0041571 L3mbtl2 protein_coding protein_coding MGP_NODShiLtJ_T0041572.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92943691 92970577 + L3mbtl2 protein_coding retained_intron MGP_NODShiLtJ_T0041573.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92943693 92970571 + L3mbtl2 protein_coding processed_transcript MGP_NODShiLtJ_T0041574.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92943693 92970587 + MGP_NODShiLtJ_P0041574 L3mbtl2 protein_coding protein_coding MGP_NODShiLtJ_T0041575.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92943738 92964337 + L3mbtl2 protein_coding processed_transcript MGP_NODShiLtJ_T0041576.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92948222 92949913 + L3mbtl2 protein_coding retained_intron MGP_NODShiLtJ_T0041577.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92948291 92957914 + L3mbtl2 protein_coding processed_transcript MGP_NODShiLtJ_T0041578.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92957802 92959575 + MGP_NODShiLtJ_P0041578 L3mbtl2 protein_coding protein_coding MGP_NODShiLtJ_T0041580.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92964280 92966122 + L3mbtl2 protein_coding retained_intron MGP_NODShiLtJ_T0041581.1 MGP_NODShiLtJ_G0021946.1 mouse_genomes_project 15 92968293 92969459 + L3mbtl2 protein_coding retained_intron MGP_NODShiLtJ_T0012939.1 MGP_NODShiLtJ_G0011047.1 mouse_genomes_project 15 11645447 11647174 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003548.1 MGP_NODShiLtJ_G0003215.1 mouse_genomes_project 15 75701743 75705078 + Gm27242 antisense antisense MGP_NODShiLtJ_T0100175.1 MGP_NODShiLtJ_G0038569.1 mouse_genomes_project 15 70147439 70147573 - Gm24696 snoRNA snoRNA MGP_NODShiLtJ_T0100167.1 MGP_NODShiLtJ_G0038561.1 mouse_genomes_project 15 49568216 49568348 + Gm25093 snoRNA snoRNA MGP_NODShiLtJ_T0042196.1 MGP_NODShiLtJ_G0022145.1 mouse_genomes_project 15 111955385 111972140 - MGP_NODShiLtJ_P0042196 Lmbr1l protein_coding protein_coding MGP_NODShiLtJ_T0042197.1 MGP_NODShiLtJ_G0022145.1 mouse_genomes_project 15 111957635 111961576 - Lmbr1l protein_coding processed_transcript MGP_NODShiLtJ_T0042198.1 MGP_NODShiLtJ_G0022145.1 mouse_genomes_project 15 111959820 111961902 - Lmbr1l protein_coding retained_intron MGP_NODShiLtJ_T0042199.1 MGP_NODShiLtJ_G0022145.1 mouse_genomes_project 15 111960518 111962099 - Lmbr1l protein_coding retained_intron MGP_NODShiLtJ_T0042200.1 MGP_NODShiLtJ_G0022145.1 mouse_genomes_project 15 111966140 111972013 - Lmbr1l protein_coding processed_transcript MGP_NODShiLtJ_T0042201.1 MGP_NODShiLtJ_G0022145.1 mouse_genomes_project 15 111967814 111971708 - Lmbr1l protein_coding processed_transcript MGP_NODShiLtJ_T0101281.1 MGP_NODShiLtJ_G0039555.1 mouse_genomes_project 15 72956177 72990291 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101282.1 MGP_NODShiLtJ_G0039555.1 mouse_genomes_project 15 72956177 72990133 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101283.1 MGP_NODShiLtJ_G0039555.1 mouse_genomes_project 15 72957182 73061703 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0098888.1 MGP_NODShiLtJ_G0037282.1 mouse_genomes_project 15 40178238 40178295 + Gm23754 snRNA snRNA MGP_NODShiLtJ_T0101671.1 MGP_NODShiLtJ_G0039840.1 mouse_genomes_project 15 111491562 111491800 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006751.1 MGP_NODShiLtJ_G0005558.1 mouse_genomes_project 15 114596010 114599414 + 6030408B16Rik lincRNA lincRNA MGP_NODShiLtJ_T0006752.1 MGP_NODShiLtJ_G0005558.1 mouse_genomes_project 15 114596030 114600231 + 6030408B16Rik lincRNA lincRNA MGP_NODShiLtJ_T0101065.1 MGP_NODShiLtJ_G0039426.1 mouse_genomes_project 15 67942598 67947593 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101066.1 MGP_NODShiLtJ_G0039426.1 mouse_genomes_project 15 67946433 67947510 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0042212.1 MGP_NODShiLtJ_G0022154.1 mouse_genomes_project 15 112339117 112348258 - MGP_NODShiLtJ_P0042212 Mcrs1 protein_coding protein_coding MGP_NODShiLtJ_T0042401.1 MGP_NODShiLtJ_G0022212.1 mouse_genomes_project 15 114913981 114924541 - MGP_NODShiLtJ_P0042401 Krt75 protein_coding protein_coding MGP_NODShiLtJ_T0009957.1 MGP_NODShiLtJ_G0008090.1 mouse_genomes_project 15 77946764 77946860 - Mir30b miRNA miRNA MGP_NODShiLtJ_T0041677.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94656507 94671318 + Serhl protein_coding processed_transcript MGP_NODShiLtJ_T0041678.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94661252 94671548 + MGP_NODShiLtJ_P0041678 Serhl protein_coding protein_coding MGP_NODShiLtJ_T0041679.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94666575 94672557 + Serhl protein_coding processed_transcript MGP_NODShiLtJ_T0041680.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94669793 94672593 + Serhl protein_coding retained_intron MGP_NODShiLtJ_T0041681.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94669819 94672618 + Serhl protein_coding retained_intron MGP_NODShiLtJ_T0041682.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94669824 94672175 + MGP_NODShiLtJ_P0041682 Serhl protein_coding protein_coding MGP_NODShiLtJ_T0041683.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94669874 94687423 + MGP_NODShiLtJ_P0041683 Serhl protein_coding protein_coding MGP_NODShiLtJ_T0041684.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94671115 94672753 + Serhl protein_coding retained_intron MGP_NODShiLtJ_T0041685.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94673462 94677883 + Serhl protein_coding retained_intron MGP_NODShiLtJ_T0041686.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94673464 94675333 + Serhl protein_coding retained_intron MGP_NODShiLtJ_T0041687.1 MGP_NODShiLtJ_G0021985.1 mouse_genomes_project 15 94673904 94687131 + MGP_NODShiLtJ_P0041687 Serhl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040399.1 MGP_NODShiLtJ_G0021585.1 mouse_genomes_project 15 24172087 25426945 + MGP_NODShiLtJ_P0040399 Cdh18 protein_coding protein_coding MGP_NODShiLtJ_T0040400.1 MGP_NODShiLtJ_G0021585.1 mouse_genomes_project 15 24890708 25082458 + Cdh18 protein_coding retained_intron MGP_NODShiLtJ_T0040401.1 MGP_NODShiLtJ_G0021585.1 mouse_genomes_project 15 24890716 25482707 + Cdh18 protein_coding retained_intron MGP_NODShiLtJ_T0040402.1 MGP_NODShiLtJ_G0021585.1 mouse_genomes_project 15 24890716 25513385 + MGP_NODShiLtJ_P0040402 Cdh18 protein_coding protein_coding MGP_NODShiLtJ_T0040403.1 MGP_NODShiLtJ_G0021585.1 mouse_genomes_project 15 25081018 25513032 + MGP_NODShiLtJ_P0040403 Cdh18 protein_coding protein_coding MGP_NODShiLtJ_T0040404.1 MGP_NODShiLtJ_G0021585.1 mouse_genomes_project 15 25081180 25512996 + MGP_NODShiLtJ_P0040404 Cdh18 protein_coding protein_coding MGP_NODShiLtJ_T0042066.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110665203 110690599 - MGP_NODShiLtJ_P0042066 Rapgef3 protein_coding protein_coding MGP_NODShiLtJ_T0042067.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110665386 110690551 - MGP_NODShiLtJ_P0042067 Rapgef3 protein_coding protein_coding MGP_NODShiLtJ_T0042068.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110665389 110690417 - MGP_NODShiLtJ_P0042068 Rapgef3 protein_coding protein_coding MGP_NODShiLtJ_T0042069.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110665449 110689815 - MGP_NODShiLtJ_P0042069 Rapgef3 protein_coding protein_coding MGP_NODShiLtJ_T0042070.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110665597 110690419 - MGP_NODShiLtJ_P0042070 Rapgef3 protein_coding protein_coding MGP_NODShiLtJ_T0042071.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110665714 110690173 - MGP_NODShiLtJ_P0042071 Rapgef3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042072.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110665797 110669295 - Rapgef3 protein_coding retained_intron MGP_NODShiLtJ_T0042073.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110666953 110690340 - Rapgef3 protein_coding retained_intron MGP_NODShiLtJ_T0042074.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110670129 110671127 - Rapgef3 protein_coding retained_intron MGP_NODShiLtJ_T0042075.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110670779 110680331 - Rapgef3 protein_coding retained_intron MGP_NODShiLtJ_T0042077.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110681725 110683254 - Rapgef3 protein_coding processed_transcript MGP_NODShiLtJ_T0042078.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110682187 110689799 - MGP_NODShiLtJ_P0042078 Rapgef3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042079.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110682192 110684707 - Rapgef3 protein_coding processed_transcript MGP_NODShiLtJ_T0042080.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110683502 110690017 - MGP_NODShiLtJ_P0042080 Rapgef3 protein_coding protein_coding MGP_NODShiLtJ_T0042081.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110683525 110684682 - Rapgef3 protein_coding retained_intron MGP_NODShiLtJ_T0042082.1 MGP_NODShiLtJ_G0022106.1 mouse_genomes_project 15 110689611 110690725 - MGP_NODShiLtJ_P0042082 Rapgef3 protein_coding protein_coding MGP_NODShiLtJ_T0100178.1 MGP_NODShiLtJ_G0038572.1 mouse_genomes_project 15 79496946 79497075 - Gm23987 snoRNA snoRNA MGP_NODShiLtJ_T0042405.1 MGP_NODShiLtJ_G0022216.1 mouse_genomes_project 15 115127936 115136335 - MGP_NODShiLtJ_P0042405 Krt74 protein_coding protein_coding MGP_NODShiLtJ_T0097951.1 MGP_NODShiLtJ_G0036363.1 mouse_genomes_project 15 43244244 43244352 - n-R5s39 rRNA rRNA MGP_NODShiLtJ_T0100186.1 MGP_NODShiLtJ_G0038580.1 mouse_genomes_project 15 107664155 107664287 - Gm23129 snoRNA snoRNA MGP_NODShiLtJ_T0003552.1 MGP_NODShiLtJ_G0003219.1 mouse_genomes_project 15 85157272 85158484 + 4933427E11Rik antisense antisense MGP_NODShiLtJ_T0003553.1 MGP_NODShiLtJ_G0003219.1 mouse_genomes_project 15 85157272 85158486 + 4933427E11Rik antisense antisense MGP_NODShiLtJ_T0040733.1 MGP_NODShiLtJ_G0021716.1 mouse_genomes_project 15 67542629 67548302 + MGP_NODShiLtJ_P0040733 Ndufb9 protein_coding protein_coding MGP_NODShiLtJ_T0041421.1 MGP_NODShiLtJ_G0021906.1 mouse_genomes_project 15 90622157 90633471 + MGP_NODShiLtJ_P0041421 Kdelr3 protein_coding protein_coding MGP_NODShiLtJ_T0041711.1 MGP_NODShiLtJ_G0021993.1 mouse_genomes_project 15 95152445 95170215 + MGP_NODShiLtJ_P0041711 Bik protein_coding protein_coding MGP_NODShiLtJ_T0040968.1 MGP_NODShiLtJ_G0021789.1 mouse_genomes_project 15 86208305 86223619 - MGP_NODShiLtJ_P0040968 Ly6h protein_coding protein_coding MGP_NODShiLtJ_T0040969.1 MGP_NODShiLtJ_G0021789.1 mouse_genomes_project 15 86210005 86223619 - MGP_NODShiLtJ_P0040969 Ly6h protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040970.1 MGP_NODShiLtJ_G0021789.1 mouse_genomes_project 15 86221716 86224226 - MGP_NODShiLtJ_P0040970 Ly6h protein_coding protein_coding MGP_NODShiLtJ_T0040971.1 MGP_NODShiLtJ_G0021789.1 mouse_genomes_project 15 86221717 86223827 - MGP_NODShiLtJ_P0040971 Ly6h protein_coding protein_coding MGP_NODShiLtJ_T0040972.1 MGP_NODShiLtJ_G0021789.1 mouse_genomes_project 15 86221719 86223628 - MGP_NODShiLtJ_P0040972 Ly6h protein_coding protein_coding MGP_NODShiLtJ_T0040973.1 MGP_NODShiLtJ_G0021789.1 mouse_genomes_project 15 86221998 86224187 - MGP_NODShiLtJ_P0040973 Ly6h protein_coding protein_coding MGP_NODShiLtJ_T0040974.1 MGP_NODShiLtJ_G0021789.1 mouse_genomes_project 15 86222185 86223603 - Ly6h protein_coding retained_intron MGP_NODShiLtJ_T0041496.1 MGP_NODShiLtJ_G0021928.1 mouse_genomes_project 15 91429960 91433633 - MGP_NODShiLtJ_P0041496 Rps19bp1 protein_coding protein_coding MGP_NODShiLtJ_T0041189.1 MGP_NODShiLtJ_G0021839.1 mouse_genomes_project 15 87456303 87473812 - MGP_NODShiLtJ_P0041189 Cyhr1 protein_coding protein_coding MGP_NODShiLtJ_T0041190.1 MGP_NODShiLtJ_G0021839.1 mouse_genomes_project 15 87459833 87469828 - MGP_NODShiLtJ_P0041190 Cyhr1 protein_coding protein_coding MGP_NODShiLtJ_T0041191.1 MGP_NODShiLtJ_G0021839.1 mouse_genomes_project 15 87471046 87473868 - MGP_NODShiLtJ_P0041191 Cyhr1 protein_coding protein_coding MGP_NODShiLtJ_T0041192.1 MGP_NODShiLtJ_G0021839.1 mouse_genomes_project 15 87471050 87473859 - MGP_NODShiLtJ_P0041192 Cyhr1 protein_coding protein_coding MGP_NODShiLtJ_T0041584.1 MGP_NODShiLtJ_G0021948.1 mouse_genomes_project 15 92986837 93013878 - MGP_NODShiLtJ_P0041584 Rangap1 protein_coding protein_coding MGP_NODShiLtJ_T0041585.1 MGP_NODShiLtJ_G0021948.1 mouse_genomes_project 15 92986837 93013878 - MGP_NODShiLtJ_P0041585 Rangap1 protein_coding protein_coding MGP_NODShiLtJ_T0041586.1 MGP_NODShiLtJ_G0021948.1 mouse_genomes_project 15 92987206 93013825 - MGP_NODShiLtJ_P0041586 Rangap1 protein_coding protein_coding MGP_NODShiLtJ_T0006746.1 MGP_NODShiLtJ_G0005553.1 mouse_genomes_project 15 111848293 111860137 + B130046B21Rik lincRNA lincRNA MGP_NODShiLtJ_T0041703.1 MGP_NODShiLtJ_G0021990.1 mouse_genomes_project 15 94910117 94963230 - MGP_NODShiLtJ_P0041703 Arfgap3 protein_coding protein_coding MGP_NODShiLtJ_T0041704.1 MGP_NODShiLtJ_G0021990.1 mouse_genomes_project 15 94911062 94963132 - MGP_NODShiLtJ_P0041704 Arfgap3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012961.1 MGP_NODShiLtJ_G0011069.1 mouse_genomes_project 15 68686470 68687477 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040757.1 MGP_NODShiLtJ_G0021727.1 mouse_genomes_project 15 72915396 72974038 - MGP_NODShiLtJ_P0040757 Gsdmc protein_coding protein_coding MGP_NODShiLtJ_T0098929.1 MGP_NODShiLtJ_G0037323.1 mouse_genomes_project 15 116083510 116083617 - Gm25141 snRNA snRNA MGP_NODShiLtJ_T0040188.1 MGP_NODShiLtJ_G0021525.1 mouse_genomes_project 15 1016318 1163759 + MGP_NODShiLtJ_P0040188 Oxct1 protein_coding protein_coding MGP_NODShiLtJ_T0040189.1 MGP_NODShiLtJ_G0021525.1 mouse_genomes_project 15 1016619 1162378 + MGP_NODShiLtJ_P0040189 Oxct1 protein_coding protein_coding MGP_NODShiLtJ_T0040190.1 MGP_NODShiLtJ_G0021525.1 mouse_genomes_project 15 1037705 1084323 + Oxct1 protein_coding processed_transcript MGP_NODShiLtJ_T0040191.1 MGP_NODShiLtJ_G0021525.1 mouse_genomes_project 15 1148926 1162395 + Oxct1 protein_coding processed_transcript MGP_NODShiLtJ_T0040192.1 MGP_NODShiLtJ_G0021525.1 mouse_genomes_project 15 1149215 1162374 + Oxct1 protein_coding processed_transcript MGP_NODShiLtJ_T0011282.1 MGP_NODShiLtJ_G0009415.1 mouse_genomes_project 15 89373986 89374096 + Gm26329 misc_RNA misc_RNA MGP_NODShiLtJ_T0098919.1 MGP_NODShiLtJ_G0037313.1 mouse_genomes_project 15 101061589 101061748 + Gm23737 snRNA snRNA MGP_NODShiLtJ_T0040266.1 MGP_NODShiLtJ_G0021547.1 mouse_genomes_project 15 6296715 6384281 - MGP_NODShiLtJ_P0040266 Slc1a3 protein_coding protein_coding MGP_NODShiLtJ_T0040267.1 MGP_NODShiLtJ_G0021547.1 mouse_genomes_project 15 6297317 6315087 - Slc1a3 protein_coding retained_intron MGP_NODShiLtJ_T0040268.1 MGP_NODShiLtJ_G0021547.1 mouse_genomes_project 15 6304919 6305913 - Slc1a3 protein_coding retained_intron MGP_NODShiLtJ_T0040269.1 MGP_NODShiLtJ_G0021547.1 mouse_genomes_project 15 6348728 6383933 - Slc1a3 protein_coding processed_transcript MGP_NODShiLtJ_T0040270.1 MGP_NODShiLtJ_G0021547.1 mouse_genomes_project 15 6356357 6383926 - MGP_NODShiLtJ_P0040270 Slc1a3 protein_coding protein_coding MGP_NODShiLtJ_T0040271.1 MGP_NODShiLtJ_G0021547.1 mouse_genomes_project 15 6358239 6384013 - Slc1a3 protein_coding retained_intron MGP_NODShiLtJ_T0040272.1 MGP_NODShiLtJ_G0021547.1 mouse_genomes_project 15 6381126 6383998 - Slc1a3 protein_coding retained_intron MGP_NODShiLtJ_T0040273.1 MGP_NODShiLtJ_G0021547.1 mouse_genomes_project 15 6382259 6383105 - Slc1a3 protein_coding processed_transcript MGP_NODShiLtJ_T0011279.1 MGP_NODShiLtJ_G0009412.1 mouse_genomes_project 15 71008072 71008158 + Gm27718 misc_RNA misc_RNA MGP_NODShiLtJ_T0042060.1 MGP_NODShiLtJ_G0022101.1 mouse_genomes_project 15 109856058 109893844 - MGP_NODShiLtJ_P0042060 Slc38a4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041451.1 MGP_NODShiLtJ_G0021917.1 mouse_genomes_project 15 90926937 90973545 - MGP_NODShiLtJ_P0041451 Npcd protein_coding protein_coding MGP_NODShiLtJ_T0041452.1 MGP_NODShiLtJ_G0021917.1 mouse_genomes_project 15 90926937 90973545 - MGP_NODShiLtJ_P0041452 Npcd protein_coding protein_coding MGP_NODShiLtJ_T0098924.1 MGP_NODShiLtJ_G0037318.1 mouse_genomes_project 15 112469167 112469274 - Gm22951 snRNA snRNA MGP_NODShiLtJ_T0012967.1 MGP_NODShiLtJ_G0011075.1 mouse_genomes_project 15 83237288 83237492 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042429.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115613773 115626443 + MGP_NODShiLtJ_P0042429 Zfp740 protein_coding protein_coding MGP_NODShiLtJ_T0042430.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115613784 115626436 + MGP_NODShiLtJ_P0042430 Zfp740 protein_coding protein_coding MGP_NODShiLtJ_T0042431.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115613816 115618474 + MGP_NODShiLtJ_P0042431 Zfp740 protein_coding protein_coding MGP_NODShiLtJ_T0042432.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115613834 115618996 + MGP_NODShiLtJ_P0042432 Zfp740 protein_coding protein_coding MGP_NODShiLtJ_T0042433.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115614734 115626444 + MGP_NODShiLtJ_P0042433 Zfp740 protein_coding protein_coding MGP_NODShiLtJ_T0042434.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115614871 115618910 + MGP_NODShiLtJ_P0042434 Zfp740 protein_coding protein_coding MGP_NODShiLtJ_T0042435.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115614905 115618898 + MGP_NODShiLtJ_P0042435 Zfp740 protein_coding protein_coding MGP_NODShiLtJ_T0042436.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115617749 115618780 + Zfp740 protein_coding retained_intron MGP_NODShiLtJ_T0042437.1 MGP_NODShiLtJ_G0022234.1 mouse_genomes_project 15 115618393 115626439 + Zfp740 protein_coding retained_intron MGP_NODShiLtJ_T0101663.1 MGP_NODShiLtJ_G0039832.1 mouse_genomes_project 15 85880171 85883321 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0012952.1 MGP_NODShiLtJ_G0011060.1 mouse_genomes_project 15 45646342 45646513 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011271.1 MGP_NODShiLtJ_G0009404.1 mouse_genomes_project 15 7904941 7905229 + Gm26350 misc_RNA misc_RNA MGP_NODShiLtJ_T0040954.1 MGP_NODShiLtJ_G0021784.1 mouse_genomes_project 15 85838953 85842684 + MGP_NODShiLtJ_P0040954 Ly6f protein_coding protein_coding MGP_NODShiLtJ_T0040955.1 MGP_NODShiLtJ_G0021784.1 mouse_genomes_project 15 85838953 85842960 + MGP_NODShiLtJ_P0040955 Ly6f protein_coding protein_coding MGP_NODShiLtJ_T0040594.1 MGP_NODShiLtJ_G0021657.1 mouse_genomes_project 15 45977392 46453355 + MGP_NODShiLtJ_P0040594 Oxr1 protein_coding protein_coding MGP_NODShiLtJ_T0040595.1 MGP_NODShiLtJ_G0021657.1 mouse_genomes_project 15 46376618 46453360 + MGP_NODShiLtJ_P0040595 Oxr1 protein_coding protein_coding MGP_NODShiLtJ_T0040596.1 MGP_NODShiLtJ_G0021657.1 mouse_genomes_project 15 46376618 46453355 + MGP_NODShiLtJ_P0040596 Oxr1 protein_coding protein_coding MGP_NODShiLtJ_T0040597.1 MGP_NODShiLtJ_G0021657.1 mouse_genomes_project 15 46377099 46453355 + MGP_NODShiLtJ_P0040597 Oxr1 protein_coding protein_coding MGP_NODShiLtJ_T0040598.1 MGP_NODShiLtJ_G0021657.1 mouse_genomes_project 15 46377107 46453358 + MGP_NODShiLtJ_P0040598 Oxr1 protein_coding protein_coding MGP_NODShiLtJ_T0040599.1 MGP_NODShiLtJ_G0021657.1 mouse_genomes_project 15 46421541 46453355 + MGP_NODShiLtJ_P0040599 Oxr1 protein_coding protein_coding MGP_NODShiLtJ_T0040640.1 MGP_NODShiLtJ_G0021677.1 mouse_genomes_project 15 60214160 60259946 + MGP_NODShiLtJ_P0040640 Slc30a8 protein_coding protein_coding MGP_NODShiLtJ_T0009985.1 MGP_NODShiLtJ_G0008118.1 mouse_genomes_project 15 95847978 95848086 + Mir6392 miRNA miRNA MGP_NODShiLtJ_T0009944.1 MGP_NODShiLtJ_G0008077.1 mouse_genomes_project 15 39542298 39542386 - Mir599 miRNA miRNA MGP_NODShiLtJ_T0042370.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114416039 114433948 + MGP_NODShiLtJ_P0042370 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042371.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114416054 114422184 + MGP_NODShiLtJ_P0042371 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042372.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114416068 114432251 + MGP_NODShiLtJ_P0042372 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042373.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114416068 114422801 + MGP_NODShiLtJ_P0042373 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042374.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114416091 114432250 + MGP_NODShiLtJ_P0042374 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042375.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114416439 114432252 + MGP_NODShiLtJ_P0042375 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042376.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114416441 114432250 + MGP_NODShiLtJ_P0042376 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042377.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114420904 114422952 + MGP_NODShiLtJ_P0042377 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042378.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114421622 114433948 + MGP_NODShiLtJ_P0042378 Acvrl1 protein_coding protein_coding MGP_NODShiLtJ_T0042379.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114423146 114424522 + Acvrl1 protein_coding retained_intron MGP_NODShiLtJ_T0042380.1 MGP_NODShiLtJ_G0022197.1 mouse_genomes_project 15 114425089 114431236 + Acvrl1 protein_coding processed_transcript MGP_NODShiLtJ_T0041799.1 MGP_NODShiLtJ_G0022025.1 mouse_genomes_project 15 97650291 97682749 + MGP_NODShiLtJ_P0041799 Ttc38 protein_coding protein_coding MGP_NODShiLtJ_T0041800.1 MGP_NODShiLtJ_G0022025.1 mouse_genomes_project 15 97650329 97681666 + Ttc38 protein_coding processed_transcript MGP_NODShiLtJ_T0041801.1 MGP_NODShiLtJ_G0022025.1 mouse_genomes_project 15 97650329 97663181 + MGP_NODShiLtJ_P0041801 Ttc38 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000913.1 MGP_NODShiLtJ_G0000842.1 mouse_genomes_project 15 6315686 6318654 - TEC TEC MGP_NODShiLtJ_T0042211.1 MGP_NODShiLtJ_G0022153.1 mouse_genomes_project 15 112320069 112339120 + MGP_NODShiLtJ_P0042211 Kcnh3 protein_coding protein_coding MGP_NODShiLtJ_T0041708.1 MGP_NODShiLtJ_G0021992.1 mouse_genomes_project 15 95102887 95135957 - MGP_NODShiLtJ_P0041708 Ttll1 protein_coding protein_coding MGP_NODShiLtJ_T0041709.1 MGP_NODShiLtJ_G0021992.1 mouse_genomes_project 15 95125768 95135864 - MGP_NODShiLtJ_P0041709 Ttll1 protein_coding protein_coding MGP_NODShiLtJ_T0041710.1 MGP_NODShiLtJ_G0021992.1 mouse_genomes_project 15 95130334 95135954 - Ttll1 protein_coding processed_transcript MGP_NODShiLtJ_T0040421.1 MGP_NODShiLtJ_G0021590.1 mouse_genomes_project 15 28378093 28512491 + MGP_NODShiLtJ_P0040421 Fam134b protein_coding protein_coding MGP_NODShiLtJ_T0040422.1 MGP_NODShiLtJ_G0021590.1 mouse_genomes_project 15 28479852 28511144 + MGP_NODShiLtJ_P0040422 Fam134b protein_coding protein_coding MGP_NODShiLtJ_T0098920.1 MGP_NODShiLtJ_G0037314.1 mouse_genomes_project 15 102231676 102231783 - Gm24415 snRNA snRNA MGP_NODShiLtJ_T0040601.1 MGP_NODShiLtJ_G0021659.1 mouse_genomes_project 15 47124450 47421920 - MGP_NODShiLtJ_P0040601 Angpt1 protein_coding protein_coding MGP_NODShiLtJ_T0040602.1 MGP_NODShiLtJ_G0021659.1 mouse_genomes_project 15 47127979 47421687 - MGP_NODShiLtJ_P0040602 Angpt1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040407.1 MGP_NODShiLtJ_G0021588.1 mouse_genomes_project 15 27901053 27901706 + MGP_NODShiLtJ_P0040407 Gm5468 protein_coding protein_coding MGP_NODShiLtJ_T0040911.1 MGP_NODShiLtJ_G0021766.1 mouse_genomes_project 15 85162778 85165009 + MGP_NODShiLtJ_P0040911 Psca protein_coding protein_coding MGP_NODShiLtJ_T0041980.1 MGP_NODShiLtJ_G0022074.1 mouse_genomes_project 15 103405897 103459731 - MGP_NODShiLtJ_P0041980 Abcd2 protein_coding protein_coding MGP_NODShiLtJ_T0040993.1 MGP_NODShiLtJ_G0021797.1 mouse_genomes_project 15 86588019 86592651 - MGP_NODShiLtJ_P0040993 Mroh6 protein_coding protein_coding MGP_NODShiLtJ_T0041092.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87091744 87095421 + MGP_NODShiLtJ_P0041092 Gpaa1 protein_coding protein_coding MGP_NODShiLtJ_T0041093.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87091857 87095412 + MGP_NODShiLtJ_P0041093 Gpaa1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041094.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87091858 87095417 + MGP_NODShiLtJ_P0041094 Gpaa1 protein_coding protein_coding MGP_NODShiLtJ_T0041095.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87091863 87093328 + Gpaa1 protein_coding retained_intron MGP_NODShiLtJ_T0041096.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87092026 87093000 + MGP_NODShiLtJ_P0041096 Gpaa1 protein_coding protein_coding MGP_NODShiLtJ_T0041097.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87092512 87093435 + MGP_NODShiLtJ_P0041097 Gpaa1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041098.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87092736 87094131 + Gpaa1 protein_coding retained_intron MGP_NODShiLtJ_T0041099.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87093040 87093761 + MGP_NODShiLtJ_P0041099 Gpaa1 protein_coding protein_coding MGP_NODShiLtJ_T0041100.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87093682 87094807 + Gpaa1 protein_coding retained_intron MGP_NODShiLtJ_T0041101.1 MGP_NODShiLtJ_G0021820.1 mouse_genomes_project 15 87094244 87094812 + Gpaa1 protein_coding retained_intron MGP_NODShiLtJ_T0100165.1 MGP_NODShiLtJ_G0038559.1 mouse_genomes_project 15 46545247 46545349 + Gm24751 snoRNA snoRNA MGP_NODShiLtJ_T0041284.1 MGP_NODShiLtJ_G0021869.1 mouse_genomes_project 15 89192309 89211228 + MGP_NODShiLtJ_P0041284 Ncf4 protein_coding protein_coding MGP_NODShiLtJ_T0041285.1 MGP_NODShiLtJ_G0021869.1 mouse_genomes_project 15 89192352 89209630 + MGP_NODShiLtJ_P0041285 Ncf4 protein_coding protein_coding MGP_NODShiLtJ_T0041286.1 MGP_NODShiLtJ_G0021869.1 mouse_genomes_project 15 89200528 89203527 + Ncf4 protein_coding retained_intron MGP_NODShiLtJ_T0041287.1 MGP_NODShiLtJ_G0021869.1 mouse_genomes_project 15 89200742 89209405 + Ncf4 protein_coding processed_transcript MGP_NODShiLtJ_T0041288.1 MGP_NODShiLtJ_G0021869.1 mouse_genomes_project 15 89202948 89209438 + Ncf4 protein_coding retained_intron MGP_NODShiLtJ_T0041289.1 MGP_NODShiLtJ_G0021869.1 mouse_genomes_project 15 89209513 89211223 + Ncf4 protein_coding retained_intron MGP_NODShiLtJ_T0040603.1 MGP_NODShiLtJ_G0021660.1 mouse_genomes_project 15 47811029 47973292 - MGP_NODShiLtJ_P0040603 Rspo2 protein_coding protein_coding MGP_NODShiLtJ_T0041663.1 MGP_NODShiLtJ_G0021974.1 mouse_genomes_project 15 93715577 93725369 - MGP_NODShiLtJ_P0041663 Cyp2d22 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042411.1 MGP_NODShiLtJ_G0022221.1 mouse_genomes_project 15 115235793 115246767 - MGP_NODShiLtJ_P0042411 Krt77 protein_coding protein_coding MGP_NODShiLtJ_T0040766.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73240506 73482769 - MGP_NODShiLtJ_P0040766 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040767.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73242185 73482735 - MGP_NODShiLtJ_P0040767 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040768.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73242188 73560547 - MGP_NODShiLtJ_P0040768 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040769.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73242190 73560547 - MGP_NODShiLtJ_P0040769 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040770.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73242190 73560547 - MGP_NODShiLtJ_P0040770 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040771.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73242190 73560384 - MGP_NODShiLtJ_P0040771 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040772.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73242190 73560547 - MGP_NODShiLtJ_P0040772 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040773.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73242190 73525371 - MGP_NODShiLtJ_P0040773 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040774.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73242268 73560365 - MGP_NODShiLtJ_P0040774 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040775.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73243096 73525371 - MGP_NODShiLtJ_P0040775 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040776.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73243096 73525371 - MGP_NODShiLtJ_P0040776 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040777.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73247883 73256190 - Asap1 protein_coding retained_intron MGP_NODShiLtJ_T0040778.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73273684 73276417 - Asap1 protein_coding processed_transcript MGP_NODShiLtJ_T0040779.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73273737 73277453 - Asap1 protein_coding retained_intron MGP_NODShiLtJ_T0040780.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73313465 73366393 - MGP_NODShiLtJ_P0040780 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0040781.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73328615 73560360 - Asap1 protein_coding processed_transcript MGP_NODShiLtJ_T0040782.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73348977 73482769 - Asap1 protein_coding retained_intron MGP_NODShiLtJ_T0040783.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73349471 73481785 - Asap1 protein_coding processed_transcript MGP_NODShiLtJ_T0040784.1 MGP_NODShiLtJ_G0021731.1 mouse_genomes_project 15 73366398 73484239 - MGP_NODShiLtJ_P0040784 Asap1 protein_coding protein_coding MGP_NODShiLtJ_T0042179.1 MGP_NODShiLtJ_G0022137.1 mouse_genomes_project 15 111768072 111794342 - MGP_NODShiLtJ_P0042179 Arf3 protein_coding protein_coding MGP_NODShiLtJ_T0042180.1 MGP_NODShiLtJ_G0022137.1 mouse_genomes_project 15 111771508 111794345 - Arf3 protein_coding processed_transcript MGP_NODShiLtJ_T0042181.1 MGP_NODShiLtJ_G0022137.1 mouse_genomes_project 15 111773986 111794123 - MGP_NODShiLtJ_P0042181 Arf3 protein_coding protein_coding MGP_NODShiLtJ_T0040806.1 MGP_NODShiLtJ_G0021738.1 mouse_genomes_project 15 75394260 75701060 - MGP_NODShiLtJ_P0040806 Kcnq3 protein_coding protein_coding MGP_NODShiLtJ_T0040807.1 MGP_NODShiLtJ_G0021738.1 mouse_genomes_project 15 75432935 75510328 - Kcnq3 protein_coding processed_transcript MGP_NODShiLtJ_T0040808.1 MGP_NODShiLtJ_G0021738.1 mouse_genomes_project 15 75697912 75700896 - Kcnq3 protein_coding retained_intron MGP_NODShiLtJ_T0041669.1 MGP_NODShiLtJ_G0021979.1 mouse_genomes_project 15 94164847 94166466 - MGP_NODShiLtJ_P0041669 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0040934.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438303 85453376 + MGP_NODShiLtJ_P0040934 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040935.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438303 85453374 + MGP_NODShiLtJ_P0040935 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040936.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438323 85453376 + MGP_NODShiLtJ_P0040936 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040937.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438357 85452247 + MGP_NODShiLtJ_P0040937 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040938.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438393 85451860 + MGP_NODShiLtJ_P0040938 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040939.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438415 85452227 + MGP_NODShiLtJ_P0040939 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040940.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438429 85452126 + MGP_NODShiLtJ_P0040940 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040941.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438437 85452198 + MGP_NODShiLtJ_P0040941 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040942.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438492 85452064 + MGP_NODShiLtJ_P0040942 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040943.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438511 85452131 + MGP_NODShiLtJ_P0040943 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040944.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438904 85452802 + MGP_NODShiLtJ_P0040944 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040945.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438917 85452500 + Ly6e protein_coding retained_intron MGP_NODShiLtJ_T0040946.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438919 85452802 + Ly6e protein_coding retained_intron MGP_NODShiLtJ_T0040947.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438923 85452081 + MGP_NODShiLtJ_P0040947 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0040948.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85438934 85439749 + Ly6e protein_coding retained_intron MGP_NODShiLtJ_T0040949.1 MGP_NODShiLtJ_G0021780.1 mouse_genomes_project 15 85439813 85452297 + MGP_NODShiLtJ_P0040949 Ly6e protein_coding protein_coding MGP_NODShiLtJ_T0100151.1 MGP_NODShiLtJ_G0038545.1 mouse_genomes_project 15 25060446 25060578 + Gm24656 snoRNA snoRNA MGP_NODShiLtJ_T0017320.1 MGP_NODShiLtJ_G0015165.1 mouse_genomes_project 15 73251964 73254534 + Gm20717 processed_transcript processed_transcript MGP_NODShiLtJ_T0006757.1 MGP_NODShiLtJ_G0005563.1 mouse_genomes_project 15 116588510 116590830 - Gm28265 lincRNA lincRNA MGP_NODShiLtJ_T0042250.1 MGP_NODShiLtJ_G0022163.1 mouse_genomes_project 15 112711137 112715815 + MGP_NODShiLtJ_P0042250 Aqp5 protein_coding protein_coding MGP_NODShiLtJ_T0042251.1 MGP_NODShiLtJ_G0022163.1 mouse_genomes_project 15 112712234 112716036 + MGP_NODShiLtJ_P0042251 Aqp5 protein_coding protein_coding MGP_NODShiLtJ_T0098926.1 MGP_NODShiLtJ_G0037320.1 mouse_genomes_project 15 113097763 113097898 - Gm23133 snRNA snRNA MGP_NODShiLtJ_T0040633.1 MGP_NODShiLtJ_G0021673.1 mouse_genomes_project 15 59626368 59707903 - MGP_NODShiLtJ_P0040633 Eif3h protein_coding protein_coding MGP_NODShiLtJ_T0041424.1 MGP_NODShiLtJ_G0021909.1 mouse_genomes_project 15 90727678 90780944 - MGP_NODShiLtJ_P0041424 Fam227a protein_coding protein_coding MGP_NODShiLtJ_T0041425.1 MGP_NODShiLtJ_G0021909.1 mouse_genomes_project 15 90729088 90740964 - MGP_NODShiLtJ_P0041425 Fam227a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041426.1 MGP_NODShiLtJ_G0021909.1 mouse_genomes_project 15 90731374 90780781 - MGP_NODShiLtJ_P0041426 Fam227a protein_coding protein_coding MGP_NODShiLtJ_T0041427.1 MGP_NODShiLtJ_G0021909.1 mouse_genomes_project 15 90731428 90780781 - MGP_NODShiLtJ_P0041427 Fam227a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041428.1 MGP_NODShiLtJ_G0021909.1 mouse_genomes_project 15 90743425 90771739 - MGP_NODShiLtJ_P0041428 Fam227a protein_coding protein_coding MGP_NODShiLtJ_T0041429.1 MGP_NODShiLtJ_G0021909.1 mouse_genomes_project 15 90755252 90780944 - Fam227a protein_coding retained_intron MGP_NODShiLtJ_T0042042.1 MGP_NODShiLtJ_G0022091.1 mouse_genomes_project 15 107927000 108265573 - MGP_NODShiLtJ_P0042042 Nell2 protein_coding protein_coding MGP_NODShiLtJ_T0042043.1 MGP_NODShiLtJ_G0022091.1 mouse_genomes_project 15 107927479 108265119 - MGP_NODShiLtJ_P0042043 Nell2 protein_coding protein_coding MGP_NODShiLtJ_T0017338.1 MGP_NODShiLtJ_G0015176.1 mouse_genomes_project 15 101601161 101604743 - Gm15609 processed_transcript processed_transcript MGP_NODShiLtJ_T0042398.1 MGP_NODShiLtJ_G0022209.1 mouse_genomes_project 15 114872174 114879968 - MGP_NODShiLtJ_P0042398 Krt84 protein_coding protein_coding MGP_NODShiLtJ_T0011292.1 MGP_NODShiLtJ_G0009425.1 mouse_genomes_project 15 116429184 116429341 + Gm27535 misc_RNA misc_RNA MGP_NODShiLtJ_T0042100.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110917052 110947483 - MGP_NODShiLtJ_P0042100 Col2a1 protein_coding protein_coding MGP_NODShiLtJ_T0042101.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110917052 110947445 - MGP_NODShiLtJ_P0042101 Col2a1 protein_coding protein_coding MGP_NODShiLtJ_T0042102.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110927753 110930380 - Col2a1 protein_coding retained_intron MGP_NODShiLtJ_T0042103.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110929569 110931899 - Col2a1 protein_coding processed_transcript MGP_NODShiLtJ_T0042104.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110937705 110942303 - Col2a1 protein_coding retained_intron MGP_NODShiLtJ_T0042105.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110937856 110942531 - Col2a1 protein_coding processed_transcript MGP_NODShiLtJ_T0042106.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110941208 110944725 - Col2a1 protein_coding processed_transcript MGP_NODShiLtJ_T0042107.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110941415 110947423 - MGP_NODShiLtJ_P0042107 Col2a1 protein_coding protein_coding MGP_NODShiLtJ_T0042108.1 MGP_NODShiLtJ_G0022111.1 mouse_genomes_project 15 110943080 110947445 - Col2a1 protein_coding retained_intron MGP_NODShiLtJ_T0040609.1 MGP_NODShiLtJ_G0021665.1 mouse_genomes_project 15 49580209 49646614 - MGP_NODShiLtJ_P0040609 Nudcd1 protein_coding protein_coding MGP_NODShiLtJ_T0040610.1 MGP_NODShiLtJ_G0021665.1 mouse_genomes_project 15 49581376 49646084 - MGP_NODShiLtJ_P0040610 Nudcd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0011291.1 MGP_NODShiLtJ_G0009424.1 mouse_genomes_project 15 116428842 116429017 + Gm28011 misc_RNA misc_RNA MGP_NODShiLtJ_T0040660.1 MGP_NODShiLtJ_G0021688.1 mouse_genomes_project 15 63314292 63347394 - MGP_NODShiLtJ_P0040660 Dscc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040661.1 MGP_NODShiLtJ_G0021688.1 mouse_genomes_project 15 63333073 63347460 - MGP_NODShiLtJ_P0040661 Dscc1 protein_coding protein_coding MGP_NODShiLtJ_T0040662.1 MGP_NODShiLtJ_G0021688.1 mouse_genomes_project 15 63333076 63347449 - MGP_NODShiLtJ_P0040662 Dscc1 protein_coding protein_coding MGP_NODShiLtJ_T0040663.1 MGP_NODShiLtJ_G0021688.1 mouse_genomes_project 15 63340693 63344732 - Dscc1 protein_coding retained_intron MGP_NODShiLtJ_T0042139.1 MGP_NODShiLtJ_G0022123.1 mouse_genomes_project 15 111371494 111386650 + MGP_NODShiLtJ_P0042139 1700031M16Rik protein_coding protein_coding MGP_NODShiLtJ_T0042140.1 MGP_NODShiLtJ_G0022123.1 mouse_genomes_project 15 111371501 111389324 + MGP_NODShiLtJ_P0042140 1700031M16Rik protein_coding protein_coding MGP_NODShiLtJ_T0042141.1 MGP_NODShiLtJ_G0022123.1 mouse_genomes_project 15 111371520 111385861 + 1700031M16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0042142.1 MGP_NODShiLtJ_G0022123.1 mouse_genomes_project 15 111371520 111388444 + 1700031M16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0042143.1 MGP_NODShiLtJ_G0022123.1 mouse_genomes_project 15 111371520 111388444 + 1700031M16Rik protein_coding processed_transcript MGP_NODShiLtJ_T0042144.1 MGP_NODShiLtJ_G0022123.1 mouse_genomes_project 15 111371520 111389195 + MGP_NODShiLtJ_P0042144 1700031M16Rik protein_coding protein_coding MGP_NODShiLtJ_T0042145.1 MGP_NODShiLtJ_G0022123.1 mouse_genomes_project 15 111371520 111389328 + MGP_NODShiLtJ_P0042145 1700031M16Rik protein_coding protein_coding MGP_NODShiLtJ_T0006748.1 MGP_NODShiLtJ_G0005555.1 mouse_genomes_project 15 113633680 113643896 - 5330439K02Rik lincRNA lincRNA MGP_NODShiLtJ_T0042210.1 MGP_NODShiLtJ_G0022152.1 mouse_genomes_project 15 112210760 112306201 + MGP_NODShiLtJ_P0042210 Spats2 protein_coding protein_coding MGP_NODShiLtJ_T0042399.1 MGP_NODShiLtJ_G0022210.1 mouse_genomes_project 15 114889728 114899154 - MGP_NODShiLtJ_P0042399 Krt82 protein_coding protein_coding MGP_NODShiLtJ_T0012971.1 MGP_NODShiLtJ_G0011079.1 mouse_genomes_project 15 86557122 86558300 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011286.1 MGP_NODShiLtJ_G0009419.1 mouse_genomes_project 15 110869346 110869657 + Gm22202 misc_RNA misc_RNA MGP_NODShiLtJ_T0097952.1 MGP_NODShiLtJ_G0036364.1 mouse_genomes_project 15 90829806 90829930 + n-R5s40 rRNA rRNA MGP_NODShiLtJ_T0009989.1 MGP_NODShiLtJ_G0008122.1 mouse_genomes_project 15 98981141 98981236 + Gm23416 miRNA miRNA MGP_NODShiLtJ_T0040704.1 MGP_NODShiLtJ_G0021701.1 mouse_genomes_project 15 66541516 66558527 - MGP_NODShiLtJ_P0040704 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040705.1 MGP_NODShiLtJ_G0021701.1 mouse_genomes_project 15 66546473 66552099 - protein_coding processed_transcript MGP_NODShiLtJ_T0040707.1 MGP_NODShiLtJ_G0021701.1 mouse_genomes_project 15 66553015 66558394 - MGP_NODShiLtJ_P0040707 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040708.1 MGP_NODShiLtJ_G0021701.1 mouse_genomes_project 15 66555159 66558529 - MGP_NODShiLtJ_P0040708 protein_coding protein_coding MGP_NODShiLtJ_T0042177.1 MGP_NODShiLtJ_G0022135.1 mouse_genomes_project 15 111738246 111753867 + MGP_NODShiLtJ_P0042177 Ccdc65 protein_coding protein_coding MGP_NODShiLtJ_T0009951.1 MGP_NODShiLtJ_G0008084.1 mouse_genomes_project 15 42664174 42664249 - Mir6951 miRNA miRNA MGP_NODShiLtJ_T0017330.1 MGP_NODShiLtJ_G0015173.1 mouse_genomes_project 15 90872052 90874277 + Gm16575 processed_transcript processed_transcript MGP_NODShiLtJ_T0012983.1 MGP_NODShiLtJ_G0011091.1 mouse_genomes_project 15 103133513 103134357 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041672.1 MGP_NODShiLtJ_G0021982.1 mouse_genomes_project 15 94324052 94328159 - MGP_NODShiLtJ_P0041672 Cyp2d26 protein_coding protein_coding MGP_NODShiLtJ_T0042046.1 MGP_NODShiLtJ_G0022094.1 mouse_genomes_project 15 108556301 108753810 + MGP_NODShiLtJ_P0042046 Ano6 protein_coding protein_coding MGP_NODShiLtJ_T0042047.1 MGP_NODShiLtJ_G0022094.1 mouse_genomes_project 15 108556442 108753823 + MGP_NODShiLtJ_P0042047 Ano6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042413.1 MGP_NODShiLtJ_G0022223.1 mouse_genomes_project 15 115299190 115305390 - MGP_NODShiLtJ_P0042413 Krt4 protein_coding protein_coding MGP_NODShiLtJ_T0006737.1 MGP_NODShiLtJ_G0005549.1 mouse_genomes_project 15 104787775 104828043 + Gm26760 lincRNA lincRNA MGP_NODShiLtJ_T0042184.1 MGP_NODShiLtJ_G0022139.1 mouse_genomes_project 15 111831207 111835183 + MGP_NODShiLtJ_P0042184 Wnt1 protein_coding protein_coding MGP_NODShiLtJ_T0012964.1 MGP_NODShiLtJ_G0011072.1 mouse_genomes_project 15 74305184 74305496 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040366.1 MGP_NODShiLtJ_G0021575.1 mouse_genomes_project 15 10428034 10428496 - MGP_NODShiLtJ_P0040366 1810049J17Rik protein_coding protein_coding MGP_NODShiLtJ_T0012938.1 MGP_NODShiLtJ_G0011046.1 mouse_genomes_project 15 8418091 8419346 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0012936.1 MGP_NODShiLtJ_G0011044.1 mouse_genomes_project 15 6619524 6620344 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041075.1 MGP_NODShiLtJ_G0021815.1 mouse_genomes_project 15 86986265 86989363 + MGP_NODShiLtJ_P0041075 Grina protein_coding protein_coding MGP_NODShiLtJ_T0011278.1 MGP_NODShiLtJ_G0009411.1 mouse_genomes_project 15 70973702 70973901 + Gm27782 misc_RNA misc_RNA MGP_NODShiLtJ_T0040891.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84946679 85021901 + MGP_NODShiLtJ_P0040891 protein_coding protein_coding MGP_NODShiLtJ_T0040892.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84946917 85021901 + MGP_NODShiLtJ_P0040892 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040893.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84947310 85021901 + MGP_NODShiLtJ_P0040893 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040894.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84970862 84973974 + MGP_NODShiLtJ_P0040894 protein_coding protein_coding MGP_NODShiLtJ_T0040895.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84991522 85005462 + MGP_NODShiLtJ_P0040895 protein_coding protein_coding MGP_NODShiLtJ_T0040896.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84993616 85003550 + MGP_NODShiLtJ_P0040896 protein_coding protein_coding MGP_NODShiLtJ_T0040897.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84993997 85021901 + MGP_NODShiLtJ_P0040897 protein_coding protein_coding MGP_NODShiLtJ_T0040898.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84993997 85021880 + MGP_NODShiLtJ_P0040898 protein_coding protein_coding MGP_NODShiLtJ_T0040899.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 84994029 85004204 + MGP_NODShiLtJ_P0040899 protein_coding protein_coding MGP_NODShiLtJ_T0040900.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 85002289 85021902 + protein_coding processed_transcript MGP_NODShiLtJ_T0040901.1 MGP_NODShiLtJ_G0021762.1 mouse_genomes_project 15 85005485 85021902 + MGP_NODShiLtJ_P0040901 protein_coding protein_coding MGP_NODShiLtJ_T0040565.1 MGP_NODShiLtJ_G0021643.1 mouse_genomes_project 15 42460611 42466456 - MGP_NODShiLtJ_P0040565 Klf10 protein_coding protein_coding MGP_NODShiLtJ_T0040584.1 MGP_NODShiLtJ_G0021652.1 mouse_genomes_project 15 44069878 44084498 + MGP_NODShiLtJ_P0040584 Dcstamp protein_coding protein_coding MGP_NODShiLtJ_T0042318.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113772738 113799187 - MGP_NODShiLtJ_P0042318 Pou6f1 protein_coding protein_coding MGP_NODShiLtJ_T0042319.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113772740 113799269 - MGP_NODShiLtJ_P0042319 Pou6f1 protein_coding protein_coding MGP_NODShiLtJ_T0042320.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113772740 113791278 - MGP_NODShiLtJ_P0042320 Pou6f1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042321.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113772740 113782947 - MGP_NODShiLtJ_P0042321 Pou6f1 protein_coding protein_coding MGP_NODShiLtJ_T0042322.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113772743 113777610 - Pou6f1 protein_coding retained_intron MGP_NODShiLtJ_T0042323.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113775669 113794382 - MGP_NODShiLtJ_P0042323 Pou6f1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042324.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113775669 113794382 - MGP_NODShiLtJ_P0042324 Pou6f1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042325.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113782872 113791381 - Pou6f1 protein_coding retained_intron MGP_NODShiLtJ_T0042326.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113783197 113799149 - Pou6f1 protein_coding processed_transcript MGP_NODShiLtJ_T0042327.1 MGP_NODShiLtJ_G0022187.1 mouse_genomes_project 15 113785207 113799149 - Pou6f1 protein_coding processed_transcript MGP_NODShiLtJ_T0042118.1 MGP_NODShiLtJ_G0022113.1 mouse_genomes_project 15 111043626 111082664 + MGP_NODShiLtJ_P0042118 Pfkm protein_coding protein_coding MGP_NODShiLtJ_T0003562.1 MGP_NODShiLtJ_G0003224.1 mouse_genomes_project 15 90526410 90530797 + Gm16059 antisense antisense MGP_NODShiLtJ_T0009994.1 MGP_NODShiLtJ_G0008127.1 mouse_genomes_project 15 109206299 109206391 + Gm25397 miRNA miRNA MGP_NODShiLtJ_T0040829.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76415154 76456233 - MGP_NODShiLtJ_P0040829 Ndrg1 protein_coding protein_coding MGP_NODShiLtJ_T0040830.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76416699 76420298 - Ndrg1 protein_coding retained_intron MGP_NODShiLtJ_T0040831.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76416910 76456232 - MGP_NODShiLtJ_P0040831 Ndrg1 protein_coding protein_coding MGP_NODShiLtJ_T0040832.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76419986 76456232 - Ndrg1 protein_coding retained_intron MGP_NODShiLtJ_T0040833.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76427842 76456232 - MGP_NODShiLtJ_P0040833 Ndrg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040834.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76428904 76456232 - MGP_NODShiLtJ_P0040834 Ndrg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040835.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76428909 76454517 - MGP_NODShiLtJ_P0040835 Ndrg1 protein_coding protein_coding MGP_NODShiLtJ_T0040836.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76428909 76434309 - MGP_NODShiLtJ_P0040836 Ndrg1 protein_coding protein_coding MGP_NODShiLtJ_T0040837.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76428922 76456209 - MGP_NODShiLtJ_P0040837 Ndrg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040838.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76428927 76456188 - MGP_NODShiLtJ_P0040838 Ndrg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040839.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76428959 76456209 - MGP_NODShiLtJ_P0040839 Ndrg1 protein_coding protein_coding MGP_NODShiLtJ_T0040840.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76428966 76454532 - MGP_NODShiLtJ_P0040840 Ndrg1 protein_coding protein_coding MGP_NODShiLtJ_T0040841.1 MGP_NODShiLtJ_G0021745.1 mouse_genomes_project 15 76432366 76456233 - MGP_NODShiLtJ_P0040841 Ndrg1 protein_coding protein_coding MGP_NODShiLtJ_T0042174.1 MGP_NODShiLtJ_G0022134.1 mouse_genomes_project 15 111688467 111703652 - MGP_NODShiLtJ_P0042174 Rnd1 protein_coding protein_coding MGP_NODShiLtJ_T0042175.1 MGP_NODShiLtJ_G0022134.1 mouse_genomes_project 15 111695414 111703653 - MGP_NODShiLtJ_P0042175 Rnd1 protein_coding protein_coding MGP_NODShiLtJ_T0042176.1 MGP_NODShiLtJ_G0022134.1 mouse_genomes_project 15 111698383 111703650 - MGP_NODShiLtJ_P0042176 Rnd1 protein_coding protein_coding MGP_NODShiLtJ_T0041347.1 MGP_NODShiLtJ_G0021890.1 mouse_genomes_project 15 90098579 90100866 + MGP_NODShiLtJ_P0041347 H1f0 protein_coding protein_coding MGP_NODShiLtJ_T0040387.1 MGP_NODShiLtJ_G0021580.1 mouse_genomes_project 15 11178209 11326943 - MGP_NODShiLtJ_P0040387 Cdh6 protein_coding protein_coding MGP_NODShiLtJ_T0041293.1 MGP_NODShiLtJ_G0021871.1 mouse_genomes_project 15 89411976 89418260 - MGP_NODShiLtJ_P0041293 Tst protein_coding protein_coding MGP_NODShiLtJ_T0006697.1 MGP_NODShiLtJ_G0005525.1 mouse_genomes_project 15 46341708 46376496 - Gm26854 lincRNA lincRNA MGP_NODShiLtJ_T0040741.1 MGP_NODShiLtJ_G0021720.1 mouse_genomes_project 15 68023317 68198372 + MGP_NODShiLtJ_P0040741 Nsmce2 protein_coding protein_coding MGP_NODShiLtJ_T0040742.1 MGP_NODShiLtJ_G0021720.1 mouse_genomes_project 15 68023317 68266444 + MGP_NODShiLtJ_P0040742 Nsmce2 protein_coding protein_coding MGP_NODShiLtJ_T0098910.1 MGP_NODShiLtJ_G0037304.1 mouse_genomes_project 15 88112067 88112213 - Gm24056 snRNA snRNA MGP_NODShiLtJ_T0040463.1 MGP_NODShiLtJ_G0021612.1 mouse_genomes_project 15 37275195 37279209 - MGP_NODShiLtJ_P0040463 Tspyl5 protein_coding protein_coding MGP_NODShiLtJ_T0040929.1 MGP_NODShiLtJ_G0021776.1 mouse_genomes_project 15 85262310 85266450 - MGP_NODShiLtJ_P0040929 protein_coding protein_coding MGP_NODShiLtJ_T0042394.1 MGP_NODShiLtJ_G0022206.1 mouse_genomes_project 15 114780347 114786224 - MGP_NODShiLtJ_P0042394 Krt81 protein_coding protein_coding MGP_NODShiLtJ_T0042146.1 MGP_NODShiLtJ_G0022124.1 mouse_genomes_project 15 111405853 111413930 + MGP_NODShiLtJ_P0042146 Olfr282 protein_coding protein_coding MGP_NODShiLtJ_T0042147.1 MGP_NODShiLtJ_G0022124.1 mouse_genomes_project 15 111413484 111414412 + MGP_NODShiLtJ_P0042147 Olfr282 protein_coding protein_coding MGP_NODShiLtJ_T0041748.1 MGP_NODShiLtJ_G0022005.1 mouse_genomes_project 15 96031720 96034739 + Parvg protein_coding processed_transcript MGP_NODShiLtJ_T0041749.1 MGP_NODShiLtJ_G0022005.1 mouse_genomes_project 15 96032414 96051729 + MGP_NODShiLtJ_P0041749 Parvg protein_coding protein_coding MGP_NODShiLtJ_T0041750.1 MGP_NODShiLtJ_G0022005.1 mouse_genomes_project 15 96032428 96036579 + MGP_NODShiLtJ_P0041750 Parvg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041751.1 MGP_NODShiLtJ_G0022005.1 mouse_genomes_project 15 96032456 96036565 + MGP_NODShiLtJ_P0041751 Parvg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041752.1 MGP_NODShiLtJ_G0022005.1 mouse_genomes_project 15 96032489 96037784 + Parvg protein_coding processed_transcript MGP_NODShiLtJ_T0041753.1 MGP_NODShiLtJ_G0022005.1 mouse_genomes_project 15 96033807 96036615 + MGP_NODShiLtJ_P0041753 Parvg protein_coding protein_coding MGP_NODShiLtJ_T0041754.1 MGP_NODShiLtJ_G0022005.1 mouse_genomes_project 15 96033807 96051765 + MGP_NODShiLtJ_P0041754 Parvg protein_coding protein_coding MGP_NODShiLtJ_T0040277.1 MGP_NODShiLtJ_G0021549.1 mouse_genomes_project 15 6749232 6797208 + Nadk2 protein_coding processed_transcript MGP_NODShiLtJ_T0040278.1 MGP_NODShiLtJ_G0021549.1 mouse_genomes_project 15 6749232 6797208 + MGP_NODShiLtJ_P0040278 Nadk2 protein_coding protein_coding MGP_NODShiLtJ_T0040279.1 MGP_NODShiLtJ_G0021549.1 mouse_genomes_project 15 6749232 6797208 + MGP_NODShiLtJ_P0040279 Nadk2 protein_coding protein_coding MGP_NODShiLtJ_T0040280.1 MGP_NODShiLtJ_G0021549.1 mouse_genomes_project 15 6749501 6794983 + MGP_NODShiLtJ_P0040280 Nadk2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040281.1 MGP_NODShiLtJ_G0021549.1 mouse_genomes_project 15 6749686 6793803 + Nadk2 protein_coding processed_transcript MGP_NODShiLtJ_T0040282.1 MGP_NODShiLtJ_G0021549.1 mouse_genomes_project 15 6769229 6793468 + Nadk2 protein_coding processed_transcript MGP_NODShiLtJ_T0040283.1 MGP_NODShiLtJ_G0021549.1 mouse_genomes_project 15 6785478 6793809 + MGP_NODShiLtJ_P0040283 Nadk2 protein_coding protein_coding MGP_NODShiLtJ_T0040284.1 MGP_NODShiLtJ_G0021549.1 mouse_genomes_project 15 6788306 6793401 + Nadk2 protein_coding retained_intron MGP_NODShiLtJ_T0040239.1 MGP_NODShiLtJ_G0021539.1 mouse_genomes_project 15 4239932 4310639 - MGP_NODShiLtJ_P0040239 Osmr protein_coding protein_coding MGP_NODShiLtJ_T0040240.1 MGP_NODShiLtJ_G0021539.1 mouse_genomes_project 15 4241392 4310639 - MGP_NODShiLtJ_P0040240 Osmr protein_coding protein_coding MGP_NODShiLtJ_T0040241.1 MGP_NODShiLtJ_G0021539.1 mouse_genomes_project 15 4246881 4251473 - Osmr protein_coding retained_intron MGP_NODShiLtJ_T0040242.1 MGP_NODShiLtJ_G0021539.1 mouse_genomes_project 15 4265076 4309938 - Osmr protein_coding retained_intron MGP_NODShiLtJ_T0040243.1 MGP_NODShiLtJ_G0021539.1 mouse_genomes_project 15 4272295 4309927 - Osmr protein_coding retained_intron MGP_NODShiLtJ_T0040244.1 MGP_NODShiLtJ_G0021539.1 mouse_genomes_project 15 4286675 4309966 - Osmr protein_coding retained_intron MGP_NODShiLtJ_T0012984.1 MGP_NODShiLtJ_G0011092.1 mouse_genomes_project 15 103134128 103134359 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006700.1 MGP_NODShiLtJ_G0005528.1 mouse_genomes_project 15 50074464 50086311 + lincRNA lincRNA MGP_NODShiLtJ_T0003584.1 MGP_NODShiLtJ_G0003242.1 mouse_genomes_project 15 113782677 113791381 + Gm20680 antisense antisense MGP_NODShiLtJ_T0017303.1 MGP_NODShiLtJ_G0015159.1 mouse_genomes_project 15 4845644 4859127 + Gm16029 processed_transcript processed_transcript MGP_NODShiLtJ_T0041671.1 MGP_NODShiLtJ_G0021981.1 mouse_genomes_project 15 94291002 94295351 - MGP_NODShiLtJ_P0041671 Cyp2d40 protein_coding protein_coding MGP_NODShiLtJ_T0040430.1 MGP_NODShiLtJ_G0021595.1 mouse_genomes_project 15 30269283 30294093 - MGP_NODShiLtJ_P0040430 Otulin protein_coding protein_coding MGP_NODShiLtJ_T0041981.1 MGP_NODShiLtJ_G0022075.1 mouse_genomes_project 15 103468219 103536409 + MGP_NODShiLtJ_P0041981 CN725425 protein_coding protein_coding MGP_NODShiLtJ_T0041982.1 MGP_NODShiLtJ_G0022075.1 mouse_genomes_project 15 103468301 103536537 + MGP_NODShiLtJ_P0041982 CN725425 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041983.1 MGP_NODShiLtJ_G0022075.1 mouse_genomes_project 15 103502735 103536400 + MGP_NODShiLtJ_P0041983 CN725425 protein_coding protein_coding MGP_NODShiLtJ_T0009958.1 MGP_NODShiLtJ_G0008091.1 mouse_genomes_project 15 77950557 77950639 - Mir30d miRNA miRNA MGP_NODShiLtJ_T0041741.1 MGP_NODShiLtJ_G0022001.1 mouse_genomes_project 15 95777819 95790512 - MGP_NODShiLtJ_P0041741 Pnpla5 protein_coding protein_coding MGP_NODShiLtJ_T0006695.1 MGP_NODShiLtJ_G0005523.1 mouse_genomes_project 15 42923098 43079217 - lincRNA lincRNA MGP_NODShiLtJ_T0040231.1 MGP_NODShiLtJ_G0021537.1 mouse_genomes_project 15 3978775 4089238 + MGP_NODShiLtJ_P0040231 Fyb protein_coding protein_coding MGP_NODShiLtJ_T0040232.1 MGP_NODShiLtJ_G0021537.1 mouse_genomes_project 15 3991768 4035847 + Fyb protein_coding retained_intron MGP_NODShiLtJ_T0040233.1 MGP_NODShiLtJ_G0021537.1 mouse_genomes_project 15 3996875 4054160 + MGP_NODShiLtJ_P0040233 Fyb protein_coding protein_coding MGP_NODShiLtJ_T0040234.1 MGP_NODShiLtJ_G0021537.1 mouse_genomes_project 15 4034832 4051748 + Fyb protein_coding retained_intron MGP_NODShiLtJ_T0040235.1 MGP_NODShiLtJ_G0021537.1 mouse_genomes_project 15 4064151 4086942 + MGP_NODShiLtJ_P0040235 Fyb protein_coding protein_coding MGP_NODShiLtJ_T0040236.1 MGP_NODShiLtJ_G0021537.1 mouse_genomes_project 15 4066517 4072391 + Fyb protein_coding retained_intron MGP_NODShiLtJ_T0040237.1 MGP_NODShiLtJ_G0021537.1 mouse_genomes_project 15 4086470 4089317 + Fyb protein_coding retained_intron MGP_NODShiLtJ_T0040605.1 MGP_NODShiLtJ_G0021662.1 mouse_genomes_project 15 48334924 48389196 + MGP_NODShiLtJ_P0040605 Emc2 protein_coding protein_coding MGP_NODShiLtJ_T0011283.1 MGP_NODShiLtJ_G0009416.1 mouse_genomes_project 15 98003362 98003630 + Gm24011 misc_RNA misc_RNA MGP_NODShiLtJ_T0003580.1 MGP_NODShiLtJ_G0003240.1 mouse_genomes_project 15 113092167 113094153 + Gm21917 antisense antisense MGP_NODShiLtJ_T0003581.1 MGP_NODShiLtJ_G0003240.1 mouse_genomes_project 15 113092167 113120073 + Gm21917 antisense antisense MGP_NODShiLtJ_T0003582.1 MGP_NODShiLtJ_G0003240.1 mouse_genomes_project 15 113095269 113120537 + Gm21917 antisense antisense MGP_NODShiLtJ_T0040210.1 MGP_NODShiLtJ_G0021534.1 mouse_genomes_project 15 2382394 2422039 - Ptger4 protein_coding processed_transcript MGP_NODShiLtJ_T0040211.1 MGP_NODShiLtJ_G0021534.1 mouse_genomes_project 15 2412004 2423501 - MGP_NODShiLtJ_P0040211 Ptger4 protein_coding protein_coding MGP_NODShiLtJ_T0040212.1 MGP_NODShiLtJ_G0021534.1 mouse_genomes_project 15 2412004 2423516 - MGP_NODShiLtJ_P0040212 Ptger4 protein_coding protein_coding MGP_NODShiLtJ_T0042204.1 MGP_NODShiLtJ_G0022148.1 mouse_genomes_project 15 112129713 112133522 + MGP_NODShiLtJ_P0042204 Prph protein_coding protein_coding MGP_NODShiLtJ_T0042205.1 MGP_NODShiLtJ_G0022148.1 mouse_genomes_project 15 112129713 112133522 + MGP_NODShiLtJ_P0042205 Prph protein_coding protein_coding MGP_NODShiLtJ_T0098909.1 MGP_NODShiLtJ_G0037303.1 mouse_genomes_project 15 86930291 86930396 - Gm25720 snRNA snRNA MGP_NODShiLtJ_T0041620.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93302005 93336405 + MGP_NODShiLtJ_P0041620 Xrcc6 protein_coding protein_coding MGP_NODShiLtJ_T0041627.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93330579 93355312 + MGP_NODShiLtJ_P0041627 Xrcc6 protein_coding protein_coding MGP_NODShiLtJ_T0041628.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93330639 93339480 + MGP_NODShiLtJ_P0041628 Xrcc6 protein_coding protein_coding MGP_NODShiLtJ_T0041629.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93330690 93339529 + MGP_NODShiLtJ_P0041629 Xrcc6 protein_coding protein_coding MGP_NODShiLtJ_T0041630.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93336113 93336761 + Xrcc6 protein_coding retained_intron MGP_NODShiLtJ_T0041631.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93336806 93341601 + Xrcc6 protein_coding retained_intron MGP_NODShiLtJ_T0041632.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93339231 93343433 + Xrcc6 protein_coding retained_intron MGP_NODShiLtJ_T0041633.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93341908 93355021 + Xrcc6 protein_coding processed_transcript MGP_NODShiLtJ_T0041634.1 MGP_NODShiLtJ_G0021958.1 mouse_genomes_project 15 93342900 93351981 + Xrcc6 protein_coding retained_intron MGP_NODShiLtJ_T0041792.1 MGP_NODShiLtJ_G0022023.1 mouse_genomes_project 15 97622271 97626928 - MGP_NODShiLtJ_P0041792 Cdpf1 protein_coding protein_coding MGP_NODShiLtJ_T0041793.1 MGP_NODShiLtJ_G0022023.1 mouse_genomes_project 15 97622499 97626886 - MGP_NODShiLtJ_P0041793 Cdpf1 protein_coding protein_coding MGP_NODShiLtJ_T0041794.1 MGP_NODShiLtJ_G0022023.1 mouse_genomes_project 15 97622543 97626876 - MGP_NODShiLtJ_P0041794 Cdpf1 protein_coding protein_coding MGP_NODShiLtJ_T0041795.1 MGP_NODShiLtJ_G0022023.1 mouse_genomes_project 15 97622546 97626322 - MGP_NODShiLtJ_P0041795 Cdpf1 protein_coding protein_coding MGP_NODShiLtJ_T0041796.1 MGP_NODShiLtJ_G0022023.1 mouse_genomes_project 15 97622556 97626929 - MGP_NODShiLtJ_P0041796 Cdpf1 protein_coding protein_coding MGP_NODShiLtJ_T0041797.1 MGP_NODShiLtJ_G0022023.1 mouse_genomes_project 15 97623543 97626891 - MGP_NODShiLtJ_P0041797 Cdpf1 protein_coding protein_coding MGP_NODShiLtJ_T0098911.1 MGP_NODShiLtJ_G0037305.1 mouse_genomes_project 15 88748581 88748681 - Gm22107 snRNA snRNA MGP_NODShiLtJ_T0041551.1 MGP_NODShiLtJ_G0021941.1 mouse_genomes_project 15 92648943 92677467 + Xpnpep3 protein_coding retained_intron MGP_NODShiLtJ_T0041552.1 MGP_NODShiLtJ_G0021941.1 mouse_genomes_project 15 92648963 92665106 + Xpnpep3 protein_coding retained_intron MGP_NODShiLtJ_T0041553.1 MGP_NODShiLtJ_G0021941.1 mouse_genomes_project 15 92648989 92704377 + MGP_NODShiLtJ_P0041553 Xpnpep3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041554.1 MGP_NODShiLtJ_G0021941.1 mouse_genomes_project 15 92648990 92688770 + MGP_NODShiLtJ_P0041554 Xpnpep3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041555.1 MGP_NODShiLtJ_G0021941.1 mouse_genomes_project 15 92649017 92708801 + MGP_NODShiLtJ_P0041555 Xpnpep3 protein_coding protein_coding MGP_NODShiLtJ_T0041556.1 MGP_NODShiLtJ_G0021941.1 mouse_genomes_project 15 92649026 92677051 + Xpnpep3 protein_coding processed_transcript MGP_NODShiLtJ_T0000922.1 MGP_NODShiLtJ_G0000851.1 mouse_genomes_project 15 92859170 92860025 - TEC TEC MGP_NODShiLtJ_T0042301.1 MGP_NODShiLtJ_G0022180.1 mouse_genomes_project 15 113517220 113527060 + MGP_NODShiLtJ_P0042301 protein_coding protein_coding MGP_NODShiLtJ_T0042302.1 MGP_NODShiLtJ_G0022180.1 mouse_genomes_project 15 113517220 113527060 + MGP_NODShiLtJ_P0042302 protein_coding protein_coding MGP_NODShiLtJ_T0040724.1 MGP_NODShiLtJ_G0021709.1 mouse_genomes_project 15 66986818 67029934 + MGP_NODShiLtJ_P0040724 Fam91a1 protein_coding protein_coding MGP_NODShiLtJ_T0009962.1 MGP_NODShiLtJ_G0008095.1 mouse_genomes_project 15 86931803 86931866 - Mir1942 miRNA miRNA MGP_NODShiLtJ_T0042396.1 MGP_NODShiLtJ_G0022208.1 mouse_genomes_project 15 114808145 114812053 - Krt83 protein_coding retained_intron MGP_NODShiLtJ_T0042397.1 MGP_NODShiLtJ_G0022208.1 mouse_genomes_project 15 114808145 114819785 - MGP_NODShiLtJ_P0042397 Krt83 protein_coding protein_coding MGP_NODShiLtJ_T0009997.1 MGP_NODShiLtJ_G0008130.1 mouse_genomes_project 15 113862323 113862390 - Mir6961 miRNA miRNA MGP_NODShiLtJ_T0012977.1 MGP_NODShiLtJ_G0011085.1 mouse_genomes_project 15 92169799 92170194 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098883.1 MGP_NODShiLtJ_G0037277.1 mouse_genomes_project 15 25744884 25745042 - Gm23980 snRNA snRNA MGP_NODShiLtJ_T0042393.1 MGP_NODShiLtJ_G0022205.1 mouse_genomes_project 15 114769039 114775196 + MGP_NODShiLtJ_P0042393 Krt88 protein_coding protein_coding MGP_NODShiLtJ_T0041880.1 MGP_NODShiLtJ_G0022048.1 mouse_genomes_project 15 101182787 101190168 - MGP_NODShiLtJ_P0041880 Mapk11 protein_coding protein_coding MGP_NODShiLtJ_T0041360.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90207622 90213190 - 1700088E04Rik protein_coding processed_transcript MGP_NODShiLtJ_T0041361.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90212928 90219464 - MGP_NODShiLtJ_P0041361 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041362.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90212928 90219516 - MGP_NODShiLtJ_P0041362 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041363.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90212934 90219530 - MGP_NODShiLtJ_P0041363 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041364.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90213265 90219507 - MGP_NODShiLtJ_P0041364 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041365.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90213282 90214995 - 1700088E04Rik protein_coding processed_transcript MGP_NODShiLtJ_T0041366.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90213290 90219511 - MGP_NODShiLtJ_P0041366 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041367.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90213329 90219482 - MGP_NODShiLtJ_P0041367 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041368.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90213355 90219459 - MGP_NODShiLtJ_P0041368 1700088E04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041369.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90215413 90219480 - MGP_NODShiLtJ_P0041369 1700088E04Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041370.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90215701 90217546 - MGP_NODShiLtJ_P0041370 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041371.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90215704 90219530 - MGP_NODShiLtJ_P0041371 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041372.1 MGP_NODShiLtJ_G0021895.1 mouse_genomes_project 15 90215706 90219255 - MGP_NODShiLtJ_P0041372 1700088E04Rik protein_coding protein_coding MGP_NODShiLtJ_T0041903.1 MGP_NODShiLtJ_G0022054.1 mouse_genomes_project 15 101394587 101397205 + MGP_NODShiLtJ_P0041903 Miox protein_coding protein_coding MGP_NODShiLtJ_T0041904.1 MGP_NODShiLtJ_G0022054.1 mouse_genomes_project 15 101394650 101396314 + Miox protein_coding retained_intron MGP_NODShiLtJ_T0041905.1 MGP_NODShiLtJ_G0022054.1 mouse_genomes_project 15 101394829 101396825 + Miox protein_coding retained_intron MGP_NODShiLtJ_T0041906.1 MGP_NODShiLtJ_G0022054.1 mouse_genomes_project 15 101395119 101396602 + MGP_NODShiLtJ_P0041906 Miox protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041907.1 MGP_NODShiLtJ_G0022054.1 mouse_genomes_project 15 101395120 101396604 + Miox protein_coding retained_intron MGP_NODShiLtJ_T0041908.1 MGP_NODShiLtJ_G0022054.1 mouse_genomes_project 15 101396622 101397201 + MGP_NODShiLtJ_P0041908 Miox protein_coding protein_coding MGP_NODShiLtJ_T0042579.1 MGP_NODShiLtJ_G0022276.1 mouse_genomes_project 15 117037684 117045193 - MGP_NODShiLtJ_P0042579 Ppp1r1a protein_coding protein_coding MGP_NODShiLtJ_T0041194.1 MGP_NODShiLtJ_G0021841.1 mouse_genomes_project 15 87481798 87483463 - MGP_NODShiLtJ_P0041194 Foxh1 protein_coding protein_coding MGP_NODShiLtJ_T0012933.1 MGP_NODShiLtJ_G0011041.1 mouse_genomes_project 15 2935404 2936028 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040680.1 MGP_NODShiLtJ_G0021693.1 mouse_genomes_project 15 63846999 63906582 + MGP_NODShiLtJ_P0040680 Mtbp protein_coding protein_coding MGP_NODShiLtJ_T0040681.1 MGP_NODShiLtJ_G0021693.1 mouse_genomes_project 15 63847024 63925732 + MGP_NODShiLtJ_P0040681 Mtbp protein_coding protein_coding MGP_NODShiLtJ_T0040682.1 MGP_NODShiLtJ_G0021693.1 mouse_genomes_project 15 63847139 63858482 + MGP_NODShiLtJ_P0040682 Mtbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040683.1 MGP_NODShiLtJ_G0021693.1 mouse_genomes_project 15 63915475 63919212 + Mtbp protein_coding retained_intron MGP_NODShiLtJ_T0040684.1 MGP_NODShiLtJ_G0021693.1 mouse_genomes_project 15 63920725 63925724 + Mtbp protein_coding processed_transcript MGP_NODShiLtJ_T0100174.1 MGP_NODShiLtJ_G0038568.1 mouse_genomes_project 15 69433579 69433711 - Gm23835 snoRNA snoRNA MGP_NODShiLtJ_T0100162.1 MGP_NODShiLtJ_G0038556.1 mouse_genomes_project 15 39267083 39267230 + Gm24771 snoRNA snoRNA MGP_NODShiLtJ_T0042483.1 MGP_NODShiLtJ_G0022247.1 mouse_genomes_project 15 115948996 115968203 - MGP_NODShiLtJ_P0042483 Map3k12 protein_coding protein_coding MGP_NODShiLtJ_T0042484.1 MGP_NODShiLtJ_G0022247.1 mouse_genomes_project 15 115950135 115962073 - MGP_NODShiLtJ_P0042484 Map3k12 protein_coding protein_coding MGP_NODShiLtJ_T0042485.1 MGP_NODShiLtJ_G0022247.1 mouse_genomes_project 15 115950385 115968431 - MGP_NODShiLtJ_P0042485 Map3k12 protein_coding protein_coding MGP_NODShiLtJ_T0042487.1 MGP_NODShiLtJ_G0022247.1 mouse_genomes_project 15 115956730 115968371 - MGP_NODShiLtJ_P0042487 Map3k12 protein_coding protein_coding MGP_NODShiLtJ_T0042488.1 MGP_NODShiLtJ_G0022247.1 mouse_genomes_project 15 115956792 115968342 - MGP_NODShiLtJ_P0042488 Map3k12 protein_coding protein_coding MGP_NODShiLtJ_T0042489.1 MGP_NODShiLtJ_G0022247.1 mouse_genomes_project 15 115956829 115968183 - MGP_NODShiLtJ_P0042489 Map3k12 protein_coding protein_coding MGP_NODShiLtJ_T0042490.1 MGP_NODShiLtJ_G0022247.1 mouse_genomes_project 15 115957478 115968179 - Map3k12 protein_coding processed_transcript MGP_NODShiLtJ_T0042491.1 MGP_NODShiLtJ_G0022247.1 mouse_genomes_project 15 115960476 115962165 - Map3k12 protein_coding processed_transcript MGP_NODShiLtJ_T0041375.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90308218 90331221 + MGP_NODShiLtJ_P0041375 Pick1 protein_coding protein_coding MGP_NODShiLtJ_T0041376.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90308427 90331203 + MGP_NODShiLtJ_P0041376 Pick1 protein_coding protein_coding MGP_NODShiLtJ_T0041377.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90308456 90329695 + Pick1 protein_coding retained_intron MGP_NODShiLtJ_T0041378.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90308461 90329695 + Pick1 protein_coding retained_intron MGP_NODShiLtJ_T0041379.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90308503 90313247 + Pick1 protein_coding processed_transcript MGP_NODShiLtJ_T0041380.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90308550 90320194 + Pick1 protein_coding retained_intron MGP_NODShiLtJ_T0041381.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90308747 90331066 + MGP_NODShiLtJ_P0041381 Pick1 protein_coding protein_coding MGP_NODShiLtJ_T0041382.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90323442 90329379 + Pick1 protein_coding processed_transcript MGP_NODShiLtJ_T0041383.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90326626 90329354 + Pick1 protein_coding processed_transcript MGP_NODShiLtJ_T0041384.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90327023 90329466 + Pick1 protein_coding processed_transcript MGP_NODShiLtJ_T0041385.1 MGP_NODShiLtJ_G0021898.1 mouse_genomes_project 15 90328088 90331203 + Pick1 protein_coding processed_transcript MGP_NODShiLtJ_T0012978.1 MGP_NODShiLtJ_G0011086.1 mouse_genomes_project 15 92956535 92957159 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040297.1 MGP_NODShiLtJ_G0021554.1 mouse_genomes_project 15 7144411 7168449 + MGP_NODShiLtJ_P0040297 Capsl protein_coding protein_coding MGP_NODShiLtJ_T0098892.1 MGP_NODShiLtJ_G0037286.1 mouse_genomes_project 15 53019332 53019394 - Gm23665 snRNA snRNA MGP_NODShiLtJ_T0040642.1 MGP_NODShiLtJ_G0021679.1 mouse_genomes_project 15 61118994 61424144 - MGP_NODShiLtJ_P0040642 Ext1 protein_coding protein_coding MGP_NODShiLtJ_T0040643.1 MGP_NODShiLtJ_G0021679.1 mouse_genomes_project 15 61123620 61423644 - MGP_NODShiLtJ_P0040643 Ext1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040644.1 MGP_NODShiLtJ_G0021679.1 mouse_genomes_project 15 61140035 61262500 - MGP_NODShiLtJ_P0040644 Ext1 protein_coding protein_coding MGP_NODShiLtJ_T0040645.1 MGP_NODShiLtJ_G0021679.1 mouse_genomes_project 15 61148250 61168090 - Ext1 protein_coding retained_intron MGP_NODShiLtJ_T0100179.1 MGP_NODShiLtJ_G0038573.1 mouse_genomes_project 15 82043119 82043379 + Gm22519 snoRNA snoRNA MGP_NODShiLtJ_T0042283.1 MGP_NODShiLtJ_G0022173.1 mouse_genomes_project 15 113078043 113092253 - MGP_NODShiLtJ_P0042283 protein_coding protein_coding MGP_NODShiLtJ_T0042284.1 MGP_NODShiLtJ_G0022173.1 mouse_genomes_project 15 113078048 113137816 - MGP_NODShiLtJ_P0042284 protein_coding protein_coding MGP_NODShiLtJ_T0040427.1 MGP_NODShiLtJ_G0021593.1 mouse_genomes_project 15 29135609 29500039 - MGP_NODShiLtJ_P0040427 Fbxl7 protein_coding protein_coding MGP_NODShiLtJ_T0040854.1 MGP_NODShiLtJ_G0021751.1 mouse_genomes_project 15 82813700 82849125 - MGP_NODShiLtJ_P0040854 Kcnk9 protein_coding protein_coding MGP_NODShiLtJ_T0041951.1 MGP_NODShiLtJ_G0022067.1 mouse_genomes_project 15 101581138 101646335 + MGP_NODShiLtJ_P0041951 Shank3 protein_coding protein_coding MGP_NODShiLtJ_T0041952.1 MGP_NODShiLtJ_G0022067.1 mouse_genomes_project 15 101581312 101646335 + MGP_NODShiLtJ_P0041952 Shank3 protein_coding protein_coding MGP_NODShiLtJ_T0041953.1 MGP_NODShiLtJ_G0022067.1 mouse_genomes_project 15 101581578 101584877 + Shank3 protein_coding processed_transcript MGP_NODShiLtJ_T0041954.1 MGP_NODShiLtJ_G0022067.1 mouse_genomes_project 15 101582738 101646333 + MGP_NODShiLtJ_P0041954 Shank3 protein_coding protein_coding MGP_NODShiLtJ_T0041955.1 MGP_NODShiLtJ_G0022067.1 mouse_genomes_project 15 101606361 101617754 + Shank3 protein_coding processed_transcript MGP_NODShiLtJ_T0041956.1 MGP_NODShiLtJ_G0022067.1 mouse_genomes_project 15 101614155 101615768 + Shank3 protein_coding processed_transcript MGP_NODShiLtJ_T0041957.1 MGP_NODShiLtJ_G0022067.1 mouse_genomes_project 15 101616249 101628663 + MGP_NODShiLtJ_P0041957 Shank3 protein_coding protein_coding MGP_NODShiLtJ_T0040809.1 MGP_NODShiLtJ_G0021739.1 mouse_genomes_project 15 75804687 75943753 - MGP_NODShiLtJ_P0040809 Lrrc6 protein_coding protein_coding MGP_NODShiLtJ_T0012946.1 MGP_NODShiLtJ_G0011054.1 mouse_genomes_project 15 40791400 40811240 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009995.1 MGP_NODShiLtJ_G0008128.1 mouse_genomes_project 15 111517617 111517734 - Mir1291 miRNA miRNA MGP_NODShiLtJ_T0009960.1 MGP_NODShiLtJ_G0008093.1 mouse_genomes_project 15 83610630 83610698 - Mir151 miRNA miRNA MGP_NODShiLtJ_T0009954.1 MGP_NODShiLtJ_G0008087.1 mouse_genomes_project 15 58533731 58533821 - Mir1907 miRNA miRNA MGP_NODShiLtJ_T0101067.1 MGP_NODShiLtJ_G0039427.1 mouse_genomes_project 15 90337311 90337832 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0006718.1 MGP_NODShiLtJ_G0005534.1 mouse_genomes_project 15 77950332 77982566 - Gm20732 lincRNA lincRNA MGP_NODShiLtJ_T0006696.1 MGP_NODShiLtJ_G0005524.1 mouse_genomes_project 15 44855830 44872854 - Gm16294 lincRNA lincRNA MGP_NODShiLtJ_T0006689.1 MGP_NODShiLtJ_G0005517.1 mouse_genomes_project 15 35616030 35620128 - Snhg18 lincRNA lincRNA MGP_NODShiLtJ_T0098921.1 MGP_NODShiLtJ_G0037315.1 mouse_genomes_project 15 105892193 105892297 + Gm26371 snRNA snRNA MGP_NODShiLtJ_T0041675.1 MGP_NODShiLtJ_G0021984.1 mouse_genomes_project 15 94550769 94576155 - MGP_NODShiLtJ_P0041675 Nfam1 protein_coding protein_coding MGP_NODShiLtJ_T0041676.1 MGP_NODShiLtJ_G0021984.1 mouse_genomes_project 15 94550784 94590463 - MGP_NODShiLtJ_P0041676 Nfam1 protein_coding protein_coding MGP_NODShiLtJ_T0041881.1 MGP_NODShiLtJ_G0022049.1 mouse_genomes_project 15 101199764 101225621 - MGP_NODShiLtJ_P0041881 Plxnb2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041882.1 MGP_NODShiLtJ_G0022049.1 mouse_genomes_project 15 101199768 101200799 - Plxnb2 protein_coding processed_transcript MGP_NODShiLtJ_T0041883.1 MGP_NODShiLtJ_G0022049.1 mouse_genomes_project 15 101200200 101201464 - Plxnb2 protein_coding processed_transcript MGP_NODShiLtJ_T0041884.1 MGP_NODShiLtJ_G0022049.1 mouse_genomes_project 15 101206004 101206541 - Plxnb2 protein_coding processed_transcript MGP_NODShiLtJ_T0041885.1 MGP_NODShiLtJ_G0022049.1 mouse_genomes_project 15 101209884 101210791 - Plxnb2 protein_coding processed_transcript MGP_NODShiLtJ_T0042316.1 MGP_NODShiLtJ_G0022185.1 mouse_genomes_project 15 113654829 113670611 - MGP_NODShiLtJ_P0042316 Csrnp2 protein_coding protein_coding MGP_NODShiLtJ_T0041507.1 MGP_NODShiLtJ_G0021933.1 mouse_genomes_project 15 91918186 92157166 + MGP_NODShiLtJ_P0041507 Tnrc6b protein_coding protein_coding MGP_NODShiLtJ_T0041508.1 MGP_NODShiLtJ_G0021933.1 mouse_genomes_project 15 91918239 92142541 + MGP_NODShiLtJ_P0041508 Tnrc6b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040634.1 MGP_NODShiLtJ_G0021674.1 mouse_genomes_project 15 59720232 59729294 + MGP_NODShiLtJ_P0040634 Utp23 protein_coding protein_coding MGP_NODShiLtJ_T0040635.1 MGP_NODShiLtJ_G0021674.1 mouse_genomes_project 15 59720281 59725433 + MGP_NODShiLtJ_P0040635 Utp23 protein_coding protein_coding MGP_NODShiLtJ_T0040636.1 MGP_NODShiLtJ_G0021674.1 mouse_genomes_project 15 59720308 59725428 + MGP_NODShiLtJ_P0040636 Utp23 protein_coding protein_coding MGP_NODShiLtJ_T0040637.1 MGP_NODShiLtJ_G0021674.1 mouse_genomes_project 15 59720545 59725427 + MGP_NODShiLtJ_P0040637 Utp23 protein_coding protein_coding MGP_NODShiLtJ_T0041392.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90372948 90421739 - MGP_NODShiLtJ_P0041392 Pla2g6 protein_coding protein_coding MGP_NODShiLtJ_T0041393.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90372948 90421687 - MGP_NODShiLtJ_P0041393 Pla2g6 protein_coding protein_coding MGP_NODShiLtJ_T0041394.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90372948 90421714 - MGP_NODShiLtJ_P0041394 Pla2g6 protein_coding protein_coding MGP_NODShiLtJ_T0041395.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90372948 90421475 - MGP_NODShiLtJ_P0041395 Pla2g6 protein_coding protein_coding MGP_NODShiLtJ_T0041396.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90372952 90421764 - MGP_NODShiLtJ_P0041396 Pla2g6 protein_coding protein_coding MGP_NODShiLtJ_T0041397.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90377143 90394755 - Pla2g6 protein_coding retained_intron MGP_NODShiLtJ_T0041398.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90393271 90395976 - Pla2g6 protein_coding retained_intron MGP_NODShiLtJ_T0041399.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90395931 90399058 - Pla2g6 protein_coding retained_intron MGP_NODShiLtJ_T0041400.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90399114 90421901 - MGP_NODShiLtJ_P0041400 Pla2g6 protein_coding protein_coding MGP_NODShiLtJ_T0041401.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90402393 90411651 - Pla2g6 protein_coding retained_intron MGP_NODShiLtJ_T0041402.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90402461 90417079 - MGP_NODShiLtJ_P0041402 Pla2g6 protein_coding protein_coding MGP_NODShiLtJ_T0041403.1 MGP_NODShiLtJ_G0021901.1 mouse_genomes_project 15 90411509 90418001 - MGP_NODShiLtJ_P0041403 Pla2g6 protein_coding protein_coding MGP_NODShiLtJ_T0040343.1 MGP_NODShiLtJ_G0021567.1 mouse_genomes_project 15 8936575 8965008 + MGP_NODShiLtJ_P0040343 Slc45a2 protein_coding protein_coding MGP_NODShiLtJ_T0040917.1 MGP_NODShiLtJ_G0021770.1 mouse_genomes_project 15 85192150 85196080 - MGP_NODShiLtJ_P0040917 Slurp2 protein_coding protein_coding MGP_NODShiLtJ_T0012955.1 MGP_NODShiLtJ_G0011063.1 mouse_genomes_project 15 51635595 51637260 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041784.1 MGP_NODShiLtJ_G0022021.1 mouse_genomes_project 15 97331453 97376363 - MGP_NODShiLtJ_P0041784 Wnt7b protein_coding protein_coding MGP_NODShiLtJ_T0041785.1 MGP_NODShiLtJ_G0022021.1 mouse_genomes_project 15 97331457 97381879 - MGP_NODShiLtJ_P0041785 Wnt7b protein_coding protein_coding MGP_NODShiLtJ_T0040855.1 MGP_NODShiLtJ_G0021752.1 mouse_genomes_project 15 82901160 83407926 - MGP_NODShiLtJ_P0040855 Trappc9 protein_coding protein_coding MGP_NODShiLtJ_T0040856.1 MGP_NODShiLtJ_G0021752.1 mouse_genomes_project 15 82901160 83402526 - MGP_NODShiLtJ_P0040856 Trappc9 protein_coding protein_coding MGP_NODShiLtJ_T0040857.1 MGP_NODShiLtJ_G0021752.1 mouse_genomes_project 15 83121047 83407926 - MGP_NODShiLtJ_P0040857 Trappc9 protein_coding protein_coding MGP_NODShiLtJ_T0040858.1 MGP_NODShiLtJ_G0021752.1 mouse_genomes_project 15 83175219 83407926 - MGP_NODShiLtJ_P0040858 Trappc9 protein_coding protein_coding MGP_NODShiLtJ_T0041028.1 MGP_NODShiLtJ_G0021807.1 mouse_genomes_project 15 86705645 86718892 - MGP_NODShiLtJ_P0041028 Fam83h protein_coding protein_coding MGP_NODShiLtJ_T0041029.1 MGP_NODShiLtJ_G0021807.1 mouse_genomes_project 15 86705645 86714049 - MGP_NODShiLtJ_P0041029 Fam83h protein_coding protein_coding MGP_NODShiLtJ_T0101669.1 MGP_NODShiLtJ_G0039838.1 mouse_genomes_project 15 94311888 94316068 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0042539.1 MGP_NODShiLtJ_G0022262.1 mouse_genomes_project 15 116478524 116491035 + Hoxc6 protein_coding processed_transcript MGP_NODShiLtJ_T0042540.1 MGP_NODShiLtJ_G0022262.1 mouse_genomes_project 15 116480794 116490273 + Hoxc6 protein_coding processed_transcript MGP_NODShiLtJ_T0042541.1 MGP_NODShiLtJ_G0022262.1 mouse_genomes_project 15 116489839 116492148 + MGP_NODShiLtJ_P0042541 Hoxc6 protein_coding protein_coding MGP_NODShiLtJ_T0098897.1 MGP_NODShiLtJ_G0037291.1 mouse_genomes_project 15 61465125 61465191 + Gm27926 snRNA snRNA MGP_NODShiLtJ_T0003550.1 MGP_NODShiLtJ_G0003217.1 mouse_genomes_project 15 76415440 76416941 + Gm17035 antisense antisense MGP_NODShiLtJ_T0042342.1 MGP_NODShiLtJ_G0022193.1 mouse_genomes_project 15 113985627 114045547 + MGP_NODShiLtJ_P0042342 Slc4a8 protein_coding protein_coding MGP_NODShiLtJ_T0042343.1 MGP_NODShiLtJ_G0022193.1 mouse_genomes_project 15 113985765 113998888 + MGP_NODShiLtJ_P0042343 Slc4a8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042344.1 MGP_NODShiLtJ_G0022193.1 mouse_genomes_project 15 113985784 113998768 + Slc4a8 protein_coding retained_intron MGP_NODShiLtJ_T0042345.1 MGP_NODShiLtJ_G0022193.1 mouse_genomes_project 15 114028525 114032068 + Slc4a8 protein_coding retained_intron MGP_NODShiLtJ_T0042346.1 MGP_NODShiLtJ_G0022193.1 mouse_genomes_project 15 114037972 114042196 + Slc4a8 protein_coding processed_transcript MGP_NODShiLtJ_T0042347.1 MGP_NODShiLtJ_G0022193.1 mouse_genomes_project 15 114040520 114041967 + Slc4a8 protein_coding retained_intron MGP_NODShiLtJ_T0098881.1 MGP_NODShiLtJ_G0037275.1 mouse_genomes_project 15 10249711 10249820 - Gm25713 snRNA snRNA MGP_NODShiLtJ_T0010007.1 MGP_NODShiLtJ_G0008140.1 mouse_genomes_project 15 116495175 116495267 + Mir615 miRNA miRNA MGP_NODShiLtJ_T0041130.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87151471 87218949 + Mroh1 protein_coding processed_transcript MGP_NODShiLtJ_T0041131.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87151723 87186364 + Mroh1 protein_coding processed_transcript MGP_NODShiLtJ_T0041132.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87151723 87233111 + MGP_NODShiLtJ_P0041132 Mroh1 protein_coding protein_coding MGP_NODShiLtJ_T0041133.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87151733 87233108 + Mroh1 protein_coding retained_intron MGP_NODShiLtJ_T0041134.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87151742 87177768 + MGP_NODShiLtJ_P0041134 Mroh1 protein_coding protein_coding MGP_NODShiLtJ_T0041135.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87151763 87186363 + MGP_NODShiLtJ_P0041135 Mroh1 protein_coding protein_coding MGP_NODShiLtJ_T0041136.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87163863 87218949 + MGP_NODShiLtJ_P0041136 Mroh1 protein_coding protein_coding MGP_NODShiLtJ_T0041137.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87167900 87233051 + MGP_NODShiLtJ_P0041137 Mroh1 protein_coding protein_coding MGP_NODShiLtJ_T0041138.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87206410 87233111 + Mroh1 protein_coding retained_intron MGP_NODShiLtJ_T0041139.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87207167 87213128 + MGP_NODShiLtJ_P0041139 Mroh1 protein_coding protein_coding MGP_NODShiLtJ_T0041140.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87220247 87226020 + Mroh1 protein_coding retained_intron MGP_NODShiLtJ_T0041141.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87229730 87231293 + Mroh1 protein_coding retained_intron MGP_NODShiLtJ_T0041142.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87230700 87231458 + Mroh1 protein_coding retained_intron MGP_NODShiLtJ_T0041143.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87231886 87232457 + Mroh1 protein_coding retained_intron MGP_NODShiLtJ_T0041144.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87231934 87233111 + MGP_NODShiLtJ_P0041144 Mroh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041145.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87232211 87233111 + MGP_NODShiLtJ_P0041145 Mroh1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041146.1 MGP_NODShiLtJ_G0021827.1 mouse_genomes_project 15 87232226 87233110 + Mroh1 protein_coding retained_intron MGP_NODShiLtJ_T0040958.1 MGP_NODShiLtJ_G0021787.1 mouse_genomes_project 15 85839024 85842953 + MGP_NODShiLtJ_P0040958 protein_coding protein_coding MGP_NODShiLtJ_T0040966.1 MGP_NODShiLtJ_G0021787.1 mouse_genomes_project 15 85839420 85842954 + MGP_NODShiLtJ_P0040966 protein_coding protein_coding MGP_NODShiLtJ_T0012953.1 MGP_NODShiLtJ_G0011061.1 mouse_genomes_project 15 48019568 48020580 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0009977.1 MGP_NODShiLtJ_G0008110.1 mouse_genomes_project 15 93765995 93766055 - Gm27924 miRNA miRNA MGP_NODShiLtJ_T0042059.1 MGP_NODShiLtJ_G0022100.1 mouse_genomes_project 15 109611875 109612256 - MGP_NODShiLtJ_P0042059 Gm8888 protein_coding protein_coding MGP_NODShiLtJ_T0011289.1 MGP_NODShiLtJ_G0009422.1 mouse_genomes_project 15 116424695 116424764 + Gm27337 misc_RNA misc_RNA MGP_NODShiLtJ_T0041420.1 MGP_NODShiLtJ_G0021905.1 mouse_genomes_project 15 90587600 90609091 - MGP_NODShiLtJ_P0041420 Kcnj4 protein_coding protein_coding MGP_NODShiLtJ_T0012932.1 MGP_NODShiLtJ_G0011040.1 mouse_genomes_project 15 2384646 2385881 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003551.1 MGP_NODShiLtJ_G0003218.1 mouse_genomes_project 15 82059351 82063024 + Gm16308 antisense antisense MGP_NODShiLtJ_T0006750.1 MGP_NODShiLtJ_G0005557.1 mouse_genomes_project 15 114517863 114520789 - A330009N23Rik lincRNA lincRNA MGP_NODShiLtJ_T0006723.1 MGP_NODShiLtJ_G0005539.1 mouse_genomes_project 15 90826437 90829690 - Gm26884 lincRNA lincRNA MGP_NODShiLtJ_T0042166.1 MGP_NODShiLtJ_G0022132.1 mouse_genomes_project 15 111656310 111669837 + MGP_NODShiLtJ_P0042166 Cacnb3 protein_coding protein_coding MGP_NODShiLtJ_T0042167.1 MGP_NODShiLtJ_G0022132.1 mouse_genomes_project 15 111658850 111669837 + MGP_NODShiLtJ_P0042167 Cacnb3 protein_coding protein_coding MGP_NODShiLtJ_T0100163.1 MGP_NODShiLtJ_G0038557.1 mouse_genomes_project 15 42203042 42203178 + Gm22353 snoRNA snoRNA MGP_NODShiLtJ_T0040749.1 MGP_NODShiLtJ_G0021725.1 mouse_genomes_project 15 70853291 70858287 + MGP_NODShiLtJ_P0040749 Myc protein_coding protein_coding MGP_NODShiLtJ_T0040750.1 MGP_NODShiLtJ_G0021725.1 mouse_genomes_project 15 70853341 70858285 + MGP_NODShiLtJ_P0040750 Myc protein_coding protein_coding MGP_NODShiLtJ_T0040751.1 MGP_NODShiLtJ_G0021725.1 mouse_genomes_project 15 70853514 70858309 + MGP_NODShiLtJ_P0040751 Myc protein_coding protein_coding MGP_NODShiLtJ_T0040752.1 MGP_NODShiLtJ_G0021725.1 mouse_genomes_project 15 70853572 70858002 + MGP_NODShiLtJ_P0040752 Myc protein_coding protein_coding MGP_NODShiLtJ_T0040753.1 MGP_NODShiLtJ_G0021725.1 mouse_genomes_project 15 70853872 70857843 + MGP_NODShiLtJ_P0040753 Myc protein_coding protein_coding MGP_NODShiLtJ_T0040754.1 MGP_NODShiLtJ_G0021725.1 mouse_genomes_project 15 70854984 70855564 + MGP_NODShiLtJ_P0040754 Myc protein_coding protein_coding MGP_NODShiLtJ_T0040755.1 MGP_NODShiLtJ_G0021725.1 mouse_genomes_project 15 70855368 70858188 + MGP_NODShiLtJ_P0040755 Myc protein_coding protein_coding MGP_NODShiLtJ_T0040843.1 MGP_NODShiLtJ_G0021747.1 mouse_genomes_project 15 77681813 77863259 - MGP_NODShiLtJ_P0040843 Zfat protein_coding protein_coding MGP_NODShiLtJ_T0040844.1 MGP_NODShiLtJ_G0021747.1 mouse_genomes_project 15 77682368 77863190 - MGP_NODShiLtJ_P0040844 Zfat protein_coding protein_coding MGP_NODShiLtJ_T0040845.1 MGP_NODShiLtJ_G0021747.1 mouse_genomes_project 15 77682369 77863241 - MGP_NODShiLtJ_P0040845 Zfat protein_coding protein_coding MGP_NODShiLtJ_T0040846.1 MGP_NODShiLtJ_G0021747.1 mouse_genomes_project 15 77780592 77863250 - MGP_NODShiLtJ_P0040846 Zfat protein_coding protein_coding MGP_NODShiLtJ_T0040847.1 MGP_NODShiLtJ_G0021747.1 mouse_genomes_project 15 77824318 77863252 - Zfat protein_coding retained_intron MGP_NODShiLtJ_T0003576.1 MGP_NODShiLtJ_G0003236.1 mouse_genomes_project 15 112533529 112541854 + Nckap5los antisense antisense MGP_NODShiLtJ_T0010004.1 MGP_NODShiLtJ_G0008137.1 mouse_genomes_project 15 115265466 115265577 + Gm44356 miRNA miRNA MGP_NODShiLtJ_T0040745.1 MGP_NODShiLtJ_G0021722.1 mouse_genomes_project 15 68708901 68710654 - MGP_NODShiLtJ_P0040745 4933412E24Rik protein_coding protein_coding MGP_NODShiLtJ_T0040205.1 MGP_NODShiLtJ_G0021531.1 mouse_genomes_project 15 2263630 2266158 + MGP_NODShiLtJ_P0040205 Rpl37 protein_coding protein_coding MGP_NODShiLtJ_T0006693.1 MGP_NODShiLtJ_G0005521.1 mouse_genomes_project 15 42556112 42557432 + Gm26863 lincRNA lincRNA MGP_NODShiLtJ_T0042453.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115757759 115766478 + MGP_NODShiLtJ_P0042453 Myg1 protein_coding protein_coding MGP_NODShiLtJ_T0042454.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115757770 115758647 + Myg1 protein_coding retained_intron MGP_NODShiLtJ_T0042455.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115757788 115766135 + Myg1 protein_coding retained_intron MGP_NODShiLtJ_T0042456.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115757800 115766118 + MGP_NODShiLtJ_P0042456 Myg1 protein_coding protein_coding MGP_NODShiLtJ_T0042457.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115757805 115766030 + MGP_NODShiLtJ_P0042457 Myg1 protein_coding protein_coding MGP_NODShiLtJ_T0042458.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115757967 115765479 + Myg1 protein_coding retained_intron MGP_NODShiLtJ_T0042459.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115758480 115765140 + Myg1 protein_coding processed_transcript MGP_NODShiLtJ_T0042460.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115759690 115765164 + Myg1 protein_coding retained_intron MGP_NODShiLtJ_T0042461.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115765033 115766135 + Myg1 protein_coding retained_intron MGP_NODShiLtJ_T0042462.1 MGP_NODShiLtJ_G0022240.1 mouse_genomes_project 15 115765316 115766074 + Myg1 protein_coding retained_intron MGP_NODShiLtJ_T0041600.1 MGP_NODShiLtJ_G0021953.1 mouse_genomes_project 15 93166384 93173000 - MGP_NODShiLtJ_P0041600 Phf5a protein_coding protein_coding MGP_NODShiLtJ_T0041601.1 MGP_NODShiLtJ_G0021953.1 mouse_genomes_project 15 93166751 93172754 - Phf5a protein_coding processed_transcript MGP_NODShiLtJ_T0042533.1 MGP_NODShiLtJ_G0022258.1 mouse_genomes_project 15 116446149 116451266 + MGP_NODShiLtJ_P0042533 Hoxc10 protein_coding protein_coding MGP_NODShiLtJ_T0040207.1 MGP_NODShiLtJ_G0021533.1 mouse_genomes_project 15 2361440 2395731 + MGP_NODShiLtJ_P0040207 Ttc33 protein_coding protein_coding MGP_NODShiLtJ_T0040208.1 MGP_NODShiLtJ_G0021533.1 mouse_genomes_project 15 2361873 2395432 + MGP_NODShiLtJ_P0040208 Ttc33 protein_coding protein_coding MGP_NODShiLtJ_T0040209.1 MGP_NODShiLtJ_G0021533.1 mouse_genomes_project 15 2363065 2387777 + MGP_NODShiLtJ_P0040209 Ttc33 protein_coding protein_coding MGP_NODShiLtJ_T0040592.1 MGP_NODShiLtJ_G0021655.1 mouse_genomes_project 15 44465919 44472421 + MGP_NODShiLtJ_P0040592 9330182O14Rik protein_coding protein_coding MGP_NODShiLtJ_T0003557.1 MGP_NODShiLtJ_G0003223.1 mouse_genomes_project 15 90243834 90295528 + Gm10863 antisense antisense MGP_NODShiLtJ_T0003558.1 MGP_NODShiLtJ_G0003223.1 mouse_genomes_project 15 90243851 90295313 + Gm10863 antisense antisense MGP_NODShiLtJ_T0003559.1 MGP_NODShiLtJ_G0003223.1 mouse_genomes_project 15 90243859 90295642 + Gm10863 antisense antisense MGP_NODShiLtJ_T0003560.1 MGP_NODShiLtJ_G0003223.1 mouse_genomes_project 15 90243859 90306619 + Gm10863 antisense antisense MGP_NODShiLtJ_T0003561.1 MGP_NODShiLtJ_G0003223.1 mouse_genomes_project 15 90288365 90296528 + Gm10863 antisense antisense MGP_NODShiLtJ_T0006756.1 MGP_NODShiLtJ_G0005562.1 mouse_genomes_project 15 116580975 116588339 - Gm28876 lincRNA lincRNA MGP_NODShiLtJ_T0040238.1 MGP_NODShiLtJ_G0021538.1 mouse_genomes_project 15 4130249 4232693 + MGP_NODShiLtJ_P0040238 Rictor protein_coding protein_coding MGP_NODShiLtJ_T0040367.1 MGP_NODShiLtJ_G0021576.1 mouse_genomes_project 15 10428092 10457826 + MGP_NODShiLtJ_P0040367 Golph3 protein_coding protein_coding MGP_NODShiLtJ_T0012947.1 MGP_NODShiLtJ_G0011055.1 mouse_genomes_project 15 41410924 41411602 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040685.1 MGP_NODShiLtJ_G0021694.1 mouse_genomes_project 15 63939052 64222630 - MGP_NODShiLtJ_P0040685 Sntb1 protein_coding protein_coding MGP_NODShiLtJ_T0040686.1 MGP_NODShiLtJ_G0021694.1 mouse_genomes_project 15 64098920 64222403 - MGP_NODShiLtJ_P0040686 Sntb1 protein_coding protein_coding MGP_NODShiLtJ_T0040687.1 MGP_NODShiLtJ_G0021694.1 mouse_genomes_project 15 64099894 64221991 - Sntb1 protein_coding processed_transcript MGP_NODShiLtJ_T0010005.1 MGP_NODShiLtJ_G0008138.1 mouse_genomes_project 15 116131806 116131881 - Mir688 miRNA miRNA MGP_NODShiLtJ_T0042506.1 MGP_NODShiLtJ_G0022250.1 mouse_genomes_project 15 115975205 115976082 - MGP_NODShiLtJ_P0042506 Npff protein_coding protein_coding MGP_NODShiLtJ_T0042508.1 MGP_NODShiLtJ_G0022250.1 mouse_genomes_project 15 115975212 115976309 - Npff protein_coding retained_intron MGP_NODShiLtJ_T0006686.1 MGP_NODShiLtJ_G0005515.1 mouse_genomes_project 15 27423501 27483974 - Gm2824 lincRNA lincRNA MGP_NODShiLtJ_T0006687.1 MGP_NODShiLtJ_G0005515.1 mouse_genomes_project 15 27448770 27483917 - Gm2824 lincRNA lincRNA MGP_NODShiLtJ_T0041667.1 MGP_NODShiLtJ_G0021978.1 mouse_genomes_project 15 94038613 94043759 + MGP_NODShiLtJ_P0041667 Cyp2d12 protein_coding protein_coding MGP_NODShiLtJ_T0041668.1 MGP_NODShiLtJ_G0021978.1 mouse_genomes_project 15 94038652 94043699 + MGP_NODShiLtJ_P0041668 Cyp2d12 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042369.1 MGP_NODShiLtJ_G0022196.1 mouse_genomes_project 15 114403600 114407704 + MGP_NODShiLtJ_P0042369 Ankrd33 protein_coding protein_coding MGP_NODShiLtJ_T0006717.1 MGP_NODShiLtJ_G0005533.1 mouse_genomes_project 15 76726012 76890636 + lincRNA lincRNA MGP_NODShiLtJ_T0042055.1 MGP_NODShiLtJ_G0022098.1 mouse_genomes_project 15 109388536 109471872 - MGP_NODShiLtJ_P0042055 Slc38a1 protein_coding protein_coding MGP_NODShiLtJ_T0042056.1 MGP_NODShiLtJ_G0022098.1 mouse_genomes_project 15 109388536 109471491 - MGP_NODShiLtJ_P0042056 Slc38a1 protein_coding protein_coding MGP_NODShiLtJ_T0042057.1 MGP_NODShiLtJ_G0022098.1 mouse_genomes_project 15 109388536 109474118 - MGP_NODShiLtJ_P0042057 Slc38a1 protein_coding protein_coding MGP_NODShiLtJ_T0040379.1 MGP_NODShiLtJ_G0021579.1 mouse_genomes_project 15 10960194 11073299 + MGP_NODShiLtJ_P0040379 Drosha protein_coding protein_coding MGP_NODShiLtJ_T0040380.1 MGP_NODShiLtJ_G0021579.1 mouse_genomes_project 15 10960242 11073252 + MGP_NODShiLtJ_P0040380 Drosha protein_coding protein_coding MGP_NODShiLtJ_T0040381.1 MGP_NODShiLtJ_G0021579.1 mouse_genomes_project 15 10960269 10968224 + Drosha protein_coding processed_transcript MGP_NODShiLtJ_T0040382.1 MGP_NODShiLtJ_G0021579.1 mouse_genomes_project 15 10960269 10968224 + Drosha protein_coding processed_transcript MGP_NODShiLtJ_T0040383.1 MGP_NODShiLtJ_G0021579.1 mouse_genomes_project 15 10961506 10968142 + Drosha protein_coding processed_transcript MGP_NODShiLtJ_T0040384.1 MGP_NODShiLtJ_G0021579.1 mouse_genomes_project 15 10967431 11073131 + MGP_NODShiLtJ_P0040384 Drosha protein_coding protein_coding MGP_NODShiLtJ_T0040385.1 MGP_NODShiLtJ_G0021579.1 mouse_genomes_project 15 10970954 11041552 + Drosha protein_coding retained_intron MGP_NODShiLtJ_T0040386.1 MGP_NODShiLtJ_G0021579.1 mouse_genomes_project 15 11017209 11023737 + Drosha protein_coding processed_transcript MGP_NODShiLtJ_T0042093.1 MGP_NODShiLtJ_G0022109.1 mouse_genomes_project 15 110781396 110837166 - MGP_NODShiLtJ_P0042093 Vdr protein_coding protein_coding MGP_NODShiLtJ_T0042094.1 MGP_NODShiLtJ_G0022109.1 mouse_genomes_project 15 110784497 110786653 - Vdr protein_coding retained_intron MGP_NODShiLtJ_T0042095.1 MGP_NODShiLtJ_G0022109.1 mouse_genomes_project 15 110803724 110825696 - MGP_NODShiLtJ_P0042095 Vdr protein_coding protein_coding MGP_NODShiLtJ_T0042096.1 MGP_NODShiLtJ_G0022109.1 mouse_genomes_project 15 110803796 110840378 - MGP_NODShiLtJ_P0042096 Vdr protein_coding protein_coding MGP_NODShiLtJ_T0042097.1 MGP_NODShiLtJ_G0022109.1 mouse_genomes_project 15 110811988 110840378 - MGP_NODShiLtJ_P0042097 Vdr protein_coding protein_coding MGP_NODShiLtJ_T0042098.1 MGP_NODShiLtJ_G0022109.1 mouse_genomes_project 15 110812000 110838418 - MGP_NODShiLtJ_P0042098 Vdr protein_coding protein_coding MGP_NODShiLtJ_T0040440.1 MGP_NODShiLtJ_G0021601.1 mouse_genomes_project 15 34536397 34536814 + MGP_NODShiLtJ_P0040440 Fam136b-ps protein_coding protein_coding MGP_NODShiLtJ_T0009970.1 MGP_NODShiLtJ_G0008103.1 mouse_genomes_project 15 90711645 90711771 - Gm27903 miRNA miRNA MGP_NODShiLtJ_T0042291.1 MGP_NODShiLtJ_G0022176.1 mouse_genomes_project 15 113436168 113472137 + MGP_NODShiLtJ_P0042291 Atf1 protein_coding protein_coding MGP_NODShiLtJ_T0042292.1 MGP_NODShiLtJ_G0022176.1 mouse_genomes_project 15 113436248 113441820 + MGP_NODShiLtJ_P0042292 Atf1 protein_coding protein_coding MGP_NODShiLtJ_T0042293.1 MGP_NODShiLtJ_G0022176.1 mouse_genomes_project 15 113441176 113442019 + Atf1 protein_coding retained_intron MGP_NODShiLtJ_T0042294.1 MGP_NODShiLtJ_G0022176.1 mouse_genomes_project 15 113441203 113465261 + MGP_NODShiLtJ_P0042294 Atf1 protein_coding protein_coding MGP_NODShiLtJ_T0042295.1 MGP_NODShiLtJ_G0022176.1 mouse_genomes_project 15 113441738 113470957 + MGP_NODShiLtJ_P0042295 Atf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042296.1 MGP_NODShiLtJ_G0022176.1 mouse_genomes_project 15 113441756 113471000 + Atf1 protein_coding processed_transcript MGP_NODShiLtJ_T0042297.1 MGP_NODShiLtJ_G0022176.1 mouse_genomes_project 15 113465091 113470789 + MGP_NODShiLtJ_P0042297 Atf1 protein_coding protein_coding MGP_NODShiLtJ_T0041545.1 MGP_NODShiLtJ_G0021939.1 mouse_genomes_project 15 92564084 92608574 - MGP_NODShiLtJ_P0041545 Slc25a17 protein_coding protein_coding MGP_NODShiLtJ_T0042024.1 MGP_NODShiLtJ_G0022085.1 mouse_genomes_project 15 106054867 106070592 - MGP_NODShiLtJ_P0042024 Prickle1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042025.1 MGP_NODShiLtJ_G0022085.1 mouse_genomes_project 15 106054876 106160722 - MGP_NODShiLtJ_P0042025 Prickle1 protein_coding protein_coding MGP_NODShiLtJ_T0042026.1 MGP_NODShiLtJ_G0022085.1 mouse_genomes_project 15 106054876 106077551 - MGP_NODShiLtJ_P0042026 Prickle1 protein_coding protein_coding MGP_NODShiLtJ_T0041666.1 MGP_NODShiLtJ_G0021977.1 mouse_genomes_project 15 93848907 93853222 + MGP_NODShiLtJ_P0041666 Cyp2d9 protein_coding protein_coding MGP_NODShiLtJ_T0009973.1 MGP_NODShiLtJ_G0008106.1 mouse_genomes_project 15 91851294 91851358 + Mir6957 miRNA miRNA MGP_NODShiLtJ_T0006754.1 MGP_NODShiLtJ_G0005560.1 mouse_genomes_project 15 115896814 115933317 - Gm26518 lincRNA lincRNA MGP_NODShiLtJ_T0017321.1 MGP_NODShiLtJ_G0015166.1 mouse_genomes_project 15 75260001 75260489 + Gm20405 processed_transcript processed_transcript MGP_NODShiLtJ_T0010000.1 MGP_NODShiLtJ_G0008133.1 mouse_genomes_project 15 114907138 114907276 + Gm44393 miRNA miRNA MGP_NODShiLtJ_T0041717.1 MGP_NODShiLtJ_G0021997.1 mouse_genomes_project 15 95233710 95363466 - MGP_NODShiLtJ_P0041717 Scube1 protein_coding protein_coding MGP_NODShiLtJ_T0041718.1 MGP_NODShiLtJ_G0021997.1 mouse_genomes_project 15 95236126 95363466 - Scube1 protein_coding retained_intron MGP_NODShiLtJ_T0041719.1 MGP_NODShiLtJ_G0021997.1 mouse_genomes_project 15 95236130 95363466 - MGP_NODShiLtJ_P0041719 Scube1 protein_coding protein_coding MGP_NODShiLtJ_T0041720.1 MGP_NODShiLtJ_G0021997.1 mouse_genomes_project 15 95237633 95363466 - MGP_NODShiLtJ_P0041720 Scube1 protein_coding protein_coding MGP_NODShiLtJ_T0041721.1 MGP_NODShiLtJ_G0021997.1 mouse_genomes_project 15 95237633 95363466 - MGP_NODShiLtJ_P0041721 Scube1 protein_coding protein_coding MGP_NODShiLtJ_T0041544.1 MGP_NODShiLtJ_G0021938.1 mouse_genomes_project 15 92475693 92479165 + MGP_NODShiLtJ_P0041544 Mchr1 protein_coding protein_coding MGP_NODShiLtJ_T0041236.1 MGP_NODShiLtJ_G0021852.1 mouse_genomes_project 15 87750718 87752966 + MGP_NODShiLtJ_P0041236 Rpl8 protein_coding protein_coding MGP_NODShiLtJ_T0042061.1 MGP_NODShiLtJ_G0022102.1 mouse_genomes_project 15 110120385 110123599 - MGP_NODShiLtJ_P0042061 Amigo2 protein_coding protein_coding MGP_NODShiLtJ_T0040930.1 MGP_NODShiLtJ_G0021777.1 mouse_genomes_project 15 85282164 85290995 - MGP_NODShiLtJ_P0040930 protein_coding protein_coding MGP_NODShiLtJ_T0040201.1 MGP_NODShiLtJ_G0021528.1 mouse_genomes_project 15 2022769 2091908 + MGP_NODShiLtJ_P0040201 Mroh2b protein_coding protein_coding MGP_NODShiLtJ_T0040342.1 MGP_NODShiLtJ_G0021566.1 mouse_genomes_project 15 8914764 8931210 + MGP_NODShiLtJ_P0040342 Amacr protein_coding protein_coding MGP_NODShiLtJ_T0042027.1 MGP_NODShiLtJ_G0022086.1 mouse_genomes_project 15 106884731 107019593 - MGP_NODShiLtJ_P0042027 Adamts20 protein_coding protein_coding MGP_NODShiLtJ_T0042028.1 MGP_NODShiLtJ_G0022086.1 mouse_genomes_project 15 106929683 107019593 - MGP_NODShiLtJ_P0042028 Adamts20 protein_coding protein_coding MGP_NODShiLtJ_T0042029.1 MGP_NODShiLtJ_G0022086.1 mouse_genomes_project 15 106962897 107019685 - Adamts20 protein_coding retained_intron MGP_NODShiLtJ_T0042030.1 MGP_NODShiLtJ_G0022086.1 mouse_genomes_project 15 107008329 107087260 - Adamts20 protein_coding processed_transcript MGP_NODShiLtJ_T0012974.1 MGP_NODShiLtJ_G0011082.1 mouse_genomes_project 15 88525893 88526454 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0040950.1 MGP_NODShiLtJ_G0021781.1 mouse_genomes_project 15 85507435 85511160 - MGP_NODShiLtJ_P0040950 Ly6a protein_coding protein_coding MGP_NODShiLtJ_T0040787.1 MGP_NODShiLtJ_G0021734.1 mouse_genomes_project 15 74244436 74304933 - MGP_NODShiLtJ_P0040787 Gm21961 protein_coding protein_coding MGP_NODShiLtJ_T0009998.1 MGP_NODShiLtJ_G0008131.1 mouse_genomes_project 15 114489684 114489747 + Mir6962 miRNA miRNA MGP_NODShiLtJ_T0041714.1 MGP_NODShiLtJ_G0021996.1 mouse_genomes_project 15 95203626 95223658 - MGP_NODShiLtJ_P0041714 Ttll12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041715.1 MGP_NODShiLtJ_G0021996.1 mouse_genomes_project 15 95204151 95223658 - MGP_NODShiLtJ_P0041715 Ttll12 protein_coding protein_coding MGP_NODShiLtJ_T0041716.1 MGP_NODShiLtJ_G0021996.1 mouse_genomes_project 15 95210273 95215399 - Ttll12 protein_coding retained_intron MGP_NODShiLtJ_T0041433.1 MGP_NODShiLtJ_G0021912.1 mouse_genomes_project 15 90798242 90825170 - MGP_NODShiLtJ_P0041433 Josd1 protein_coding protein_coding MGP_NODShiLtJ_T0041712.1 MGP_NODShiLtJ_G0021994.1 mouse_genomes_project 15 95172376 95181291 - MGP_NODShiLtJ_P0041712 Mcat protein_coding protein_coding MGP_NODShiLtJ_T0041928.1 MGP_NODShiLtJ_G0022061.1 mouse_genomes_project 15 101456785 101480283 - MGP_NODShiLtJ_P0041928 Syce3 protein_coding protein_coding MGP_NODShiLtJ_T0041929.1 MGP_NODShiLtJ_G0022061.1 mouse_genomes_project 15 101456785 101480523 - MGP_NODShiLtJ_P0041929 Syce3 protein_coding protein_coding MGP_NODShiLtJ_T0006747.1 MGP_NODShiLtJ_G0005554.1 mouse_genomes_project 15 112049015 112052325 + 4930578M01Rik lincRNA lincRNA MGP_NODShiLtJ_T0042392.1 MGP_NODShiLtJ_G0022204.1 mouse_genomes_project 15 114746289 114759685 - MGP_NODShiLtJ_P0042392 Krt87 protein_coding protein_coding MGP_NODShiLtJ_T0041645.1 MGP_NODShiLtJ_G0021966.1 mouse_genomes_project 15 93567510 93579992 - MGP_NODShiLtJ_P0041645 Cenpm protein_coding protein_coding MGP_NODShiLtJ_T0041646.1 MGP_NODShiLtJ_G0021966.1 mouse_genomes_project 15 93567510 93579992 - MGP_NODShiLtJ_P0041646 Cenpm protein_coding protein_coding MGP_NODShiLtJ_T0041812.1 MGP_NODShiLtJ_G0022028.1 mouse_genomes_project 15 97722721 97873447 - MGP_NODShiLtJ_P0041812 Celsr1 protein_coding protein_coding MGP_NODShiLtJ_T0041813.1 MGP_NODShiLtJ_G0022028.1 mouse_genomes_project 15 97722890 97873440 - MGP_NODShiLtJ_P0041813 Celsr1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041374.1 MGP_NODShiLtJ_G0021897.1 mouse_genomes_project 15 90232709 90242277 - MGP_NODShiLtJ_P0041374 Sox10 protein_coding protein_coding MGP_NODShiLtJ_T0040517.1 MGP_NODShiLtJ_G0021631.1 mouse_genomes_project 15 40469289 40488937 - MGP_NODShiLtJ_P0040517 Ankrd46 protein_coding protein_coding MGP_NODShiLtJ_T0100157.1 MGP_NODShiLtJ_G0038551.1 mouse_genomes_project 15 34450858 34450992 - Gm26416 snoRNA snoRNA MGP_NODShiLtJ_T0098899.1 MGP_NODShiLtJ_G0037293.1 mouse_genomes_project 15 65710853 65710943 - Gm26178 snRNA snRNA MGP_NODShiLtJ_T0042576.1 MGP_NODShiLtJ_G0022274.1 mouse_genomes_project 15 116957080 117004960 + MGP_NODShiLtJ_P0042576 Nckap1l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042577.1 MGP_NODShiLtJ_G0022274.1 mouse_genomes_project 15 116957107 117004951 + MGP_NODShiLtJ_P0042577 Nckap1l protein_coding protein_coding MGP_NODShiLtJ_T0042267.1 MGP_NODShiLtJ_G0022166.1 mouse_genomes_project 15 112801076 112834632 + MGP_NODShiLtJ_P0042267 Asic1 protein_coding protein_coding MGP_NODShiLtJ_T0042575.1 MGP_NODShiLtJ_G0022273.1 mouse_genomes_project 15 116938405 116951746 - MGP_NODShiLtJ_P0042575 BC048502 protein_coding protein_coding MGP_NODShiLtJ_T0003566.1 MGP_NODShiLtJ_G0003228.1 mouse_genomes_project 15 97930463 97935285 - antisense antisense MGP_NODShiLtJ_T0100180.1 MGP_NODShiLtJ_G0038574.1 mouse_genomes_project 15 83712186 83712309 + Gm24787 snoRNA snoRNA MGP_NODShiLtJ_T0041705.1 MGP_NODShiLtJ_G0021991.1 mouse_genomes_project 15 94988790 95048380 - MGP_NODShiLtJ_P0041705 Pacsin2 protein_coding protein_coding MGP_NODShiLtJ_T0041706.1 MGP_NODShiLtJ_G0021991.1 mouse_genomes_project 15 94988790 95083152 - MGP_NODShiLtJ_P0041706 Pacsin2 protein_coding protein_coding MGP_NODShiLtJ_T0041707.1 MGP_NODShiLtJ_G0021991.1 mouse_genomes_project 15 94989305 95015580 - MGP_NODShiLtJ_P0041707 Pacsin2 protein_coding protein_coding MGP_NODShiLtJ_T0040259.1 MGP_NODShiLtJ_G0021545.1 mouse_genomes_project 15 5743835 5822080 + MGP_NODShiLtJ_P0040259 2410089E03Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040260.1 MGP_NODShiLtJ_G0021545.1 mouse_genomes_project 15 5743861 5860079 + MGP_NODShiLtJ_P0040260 2410089E03Rik protein_coding protein_coding MGP_NODShiLtJ_T0040261.1 MGP_NODShiLtJ_G0021545.1 mouse_genomes_project 15 5762904 5763759 + 2410089E03Rik protein_coding retained_intron MGP_NODShiLtJ_T0040262.1 MGP_NODShiLtJ_G0021545.1 mouse_genomes_project 15 5773368 5784938 + 2410089E03Rik protein_coding retained_intron MGP_NODShiLtJ_T0040263.1 MGP_NODShiLtJ_G0021545.1 mouse_genomes_project 15 5800588 5803251 + 2410089E03Rik protein_coding retained_intron MGP_NODShiLtJ_T0040264.1 MGP_NODShiLtJ_G0021545.1 mouse_genomes_project 15 5834357 5840100 + 2410089E03Rik protein_coding retained_intron MGP_NODShiLtJ_T0041786.1 MGP_NODShiLtJ_G0022022.1 mouse_genomes_project 15 97542056 97587006 + Ppara protein_coding processed_transcript MGP_NODShiLtJ_T0041787.1 MGP_NODShiLtJ_G0022022.1 mouse_genomes_project 15 97542637 97617459 + MGP_NODShiLtJ_P0041787 Ppara protein_coding protein_coding MGP_NODShiLtJ_T0041788.1 MGP_NODShiLtJ_G0022022.1 mouse_genomes_project 15 97542712 97587101 + Ppara protein_coding processed_transcript MGP_NODShiLtJ_T0041789.1 MGP_NODShiLtJ_G0022022.1 mouse_genomes_project 15 97542849 97618120 + MGP_NODShiLtJ_P0041789 Ppara protein_coding protein_coding MGP_NODShiLtJ_T0041790.1 MGP_NODShiLtJ_G0022022.1 mouse_genomes_project 15 97543204 97617044 + MGP_NODShiLtJ_P0041790 Ppara protein_coding protein_coding MGP_NODShiLtJ_T0041791.1 MGP_NODShiLtJ_G0022022.1 mouse_genomes_project 15 97581577 97587141 + Ppara protein_coding processed_transcript MGP_NODShiLtJ_T0098278.1 MGP_NODShiLtJ_G0036686.1 mouse_genomes_project 15 41309768 41310528 + Gm16137 sense_intronic sense_intronic MGP_NODShiLtJ_T0040535.1 MGP_NODShiLtJ_G0021636.1 mouse_genomes_project 15 41029063 41044516 - MGP_NODShiLtJ_P0040535 Zfp706 protein_coding protein_coding MGP_NODShiLtJ_T0098903.1 MGP_NODShiLtJ_G0037297.1 mouse_genomes_project 15 73175811 73175916 + Gm25628 snRNA snRNA MGP_NODShiLtJ_T0101658.1 MGP_NODShiLtJ_G0039827.1 mouse_genomes_project 15 85410318 85411168 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003556.1 MGP_NODShiLtJ_G0003222.1 mouse_genomes_project 15 89970625 89972320 - 1700027A07Rik antisense antisense MGP_NODShiLtJ_T0041777.1 MGP_NODShiLtJ_G0022016.1 mouse_genomes_project 15 96825162 96898240 - MGP_NODShiLtJ_P0041777 Smc1b protein_coding protein_coding MGP_NODShiLtJ_T0101667.1 MGP_NODShiLtJ_G0039836.1 mouse_genomes_project 15 85945367 85947551 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010008.1 MGP_NODShiLtJ_G0008141.1 mouse_genomes_project 15 116786735 116786832 + Mir148b miRNA miRNA MGP_NODShiLtJ_T0040722.1 MGP_NODShiLtJ_G0021708.1 mouse_genomes_project 15 66894464 66958172 - MGP_NODShiLtJ_P0040722 Anxa13 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040723.1 MGP_NODShiLtJ_G0021708.1 mouse_genomes_project 15 66894791 66931826 - MGP_NODShiLtJ_P0040723 Anxa13 protein_coding protein_coding MGP_NODShiLtJ_T0017341.1 MGP_NODShiLtJ_G0015178.1 mouse_genomes_project 15 111136703 111176886 - Gm44579 processed_transcript processed_transcript MGP_NODShiLtJ_T0041534.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92234005 92427268 - MGP_NODShiLtJ_P0041534 Mkl1 protein_coding protein_coding MGP_NODShiLtJ_T0041535.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92234005 92427244 - MGP_NODShiLtJ_P0041535 Mkl1 protein_coding protein_coding MGP_NODShiLtJ_T0041536.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92234015 92342284 - MGP_NODShiLtJ_P0041536 Mkl1 protein_coding protein_coding MGP_NODShiLtJ_T0041537.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92234015 92427234 - MGP_NODShiLtJ_P0041537 Mkl1 protein_coding protein_coding MGP_NODShiLtJ_T0041538.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92237578 92271698 - MGP_NODShiLtJ_P0041538 Mkl1 protein_coding protein_coding MGP_NODShiLtJ_T0041539.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92238487 92239913 - Mkl1 protein_coding retained_intron MGP_NODShiLtJ_T0041540.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92241962 92243027 - Mkl1 protein_coding retained_intron MGP_NODShiLtJ_T0041541.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92244213 92246021 - Mkl1 protein_coding retained_intron MGP_NODShiLtJ_T0041542.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92248374 92427239 - Mkl1 protein_coding retained_intron MGP_NODShiLtJ_T0041543.1 MGP_NODShiLtJ_G0021937.1 mouse_genomes_project 15 92271284 92427033 - Mkl1 protein_coding retained_intron MGP_NODShiLtJ_T0041692.1 MGP_NODShiLtJ_G0021987.1 mouse_genomes_project 15 94696927 94724802 - MGP_NODShiLtJ_P0041692 Poldip3 protein_coding protein_coding MGP_NODShiLtJ_T0041693.1 MGP_NODShiLtJ_G0021987.1 mouse_genomes_project 15 94696927 94724855 - MGP_NODShiLtJ_P0041693 Poldip3 protein_coding protein_coding MGP_NODShiLtJ_T0041694.1 MGP_NODShiLtJ_G0021987.1 mouse_genomes_project 15 94705469 94724772 - MGP_NODShiLtJ_P0041694 Poldip3 protein_coding protein_coding MGP_NODShiLtJ_T0041695.1 MGP_NODShiLtJ_G0021987.1 mouse_genomes_project 15 94705564 94708211 - Poldip3 protein_coding retained_intron MGP_NODShiLtJ_T0041696.1 MGP_NODShiLtJ_G0021987.1 mouse_genomes_project 15 94707987 94724800 - Poldip3 protein_coding retained_intron MGP_NODShiLtJ_T0041697.1 MGP_NODShiLtJ_G0021987.1 mouse_genomes_project 15 94710268 94724807 - Poldip3 protein_coding retained_intron MGP_NODShiLtJ_T0041473.1 MGP_NODShiLtJ_G0021920.1 mouse_genomes_project 15 91056446 91074313 - MGP_NODShiLtJ_P0041473 Cbx7 protein_coding protein_coding MGP_NODShiLtJ_T0041474.1 MGP_NODShiLtJ_G0021920.1 mouse_genomes_project 15 91056460 91074436 - MGP_NODShiLtJ_P0041474 Cbx7 protein_coding protein_coding MGP_NODShiLtJ_T0041475.1 MGP_NODShiLtJ_G0021920.1 mouse_genomes_project 15 91056463 91074565 - Cbx7 protein_coding retained_intron MGP_NODShiLtJ_T0041476.1 MGP_NODShiLtJ_G0021920.1 mouse_genomes_project 15 91060146 91075681 - MGP_NODShiLtJ_P0041476 Cbx7 protein_coding protein_coding MGP_NODShiLtJ_T0041477.1 MGP_NODShiLtJ_G0021920.1 mouse_genomes_project 15 91060416 91113437 - MGP_NODShiLtJ_P0041477 Cbx7 protein_coding protein_coding MGP_NODShiLtJ_T0041478.1 MGP_NODShiLtJ_G0021920.1 mouse_genomes_project 15 91060919 91074313 - MGP_NODShiLtJ_P0041478 Cbx7 protein_coding protein_coding MGP_NODShiLtJ_T0041479.1 MGP_NODShiLtJ_G0021920.1 mouse_genomes_project 15 91072404 91075612 - Cbx7 protein_coding retained_intron MGP_NODShiLtJ_T0040992.1 MGP_NODShiLtJ_G0021796.1 mouse_genomes_project 15 86564362 86569425 + MGP_NODShiLtJ_P0040992 Gsdmd protein_coding protein_coding MGP_NODShiLtJ_T0040361.1 MGP_NODShiLtJ_G0021574.1 mouse_genomes_project 15 10302005 10370143 + MGP_NODShiLtJ_P0040361 Mtmr12 protein_coding protein_coding MGP_NODShiLtJ_T0040362.1 MGP_NODShiLtJ_G0021574.1 mouse_genomes_project 15 10302062 10369897 + MGP_NODShiLtJ_P0040362 Mtmr12 protein_coding protein_coding MGP_NODShiLtJ_T0040363.1 MGP_NODShiLtJ_G0021574.1 mouse_genomes_project 15 10302081 10370022 + MGP_NODShiLtJ_P0040363 Mtmr12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040364.1 MGP_NODShiLtJ_G0021574.1 mouse_genomes_project 15 10302095 10370140 + MGP_NODShiLtJ_P0040364 Mtmr12 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040365.1 MGP_NODShiLtJ_G0021574.1 mouse_genomes_project 15 10320862 10342524 + Mtmr12 protein_coding processed_transcript MGP_NODShiLtJ_T0040641.1 MGP_NODShiLtJ_G0021678.1 mouse_genomes_project 15 60740831 60760517 + MGP_NODShiLtJ_P0040641 Med30 protein_coding protein_coding MGP_NODShiLtJ_T0040850.1 MGP_NODShiLtJ_G0021750.1 mouse_genomes_project 15 82045062 82299077 - MGP_NODShiLtJ_P0040850 Col22a1 protein_coding protein_coding MGP_NODShiLtJ_T0040851.1 MGP_NODShiLtJ_G0021750.1 mouse_genomes_project 15 82120289 82152278 - MGP_NODShiLtJ_P0040851 Col22a1 protein_coding protein_coding MGP_NODShiLtJ_T0040852.1 MGP_NODShiLtJ_G0021750.1 mouse_genomes_project 15 82160907 82213940 - Col22a1 protein_coding processed_transcript MGP_NODShiLtJ_T0040853.1 MGP_NODShiLtJ_G0021750.1 mouse_genomes_project 15 82180241 82213965 - MGP_NODShiLtJ_P0040853 Col22a1 protein_coding protein_coding MGP_NODShiLtJ_T0017304.1 MGP_NODShiLtJ_G0015160.1 mouse_genomes_project 15 19020088 19180847 - C030047K22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0041654.1 MGP_NODShiLtJ_G0021972.1 mouse_genomes_project 15 93685529 93695640 + Smdt1 protein_coding processed_transcript MGP_NODShiLtJ_T0041657.1 MGP_NODShiLtJ_G0021972.1 mouse_genomes_project 15 93687552 93695588 + Smdt1 protein_coding processed_transcript MGP_NODShiLtJ_T0041659.1 MGP_NODShiLtJ_G0021972.1 mouse_genomes_project 15 93692529 93695671 + MGP_NODShiLtJ_P0041659 Smdt1 protein_coding protein_coding MGP_NODShiLtJ_T0041660.1 MGP_NODShiLtJ_G0021972.1 mouse_genomes_project 15 93692589 93695672 + MGP_NODShiLtJ_P0041660 Smdt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041661.1 MGP_NODShiLtJ_G0021972.1 mouse_genomes_project 15 93693795 93695450 + MGP_NODShiLtJ_P0041661 Smdt1 protein_coding protein_coding MGP_NODShiLtJ_T0040315.1 MGP_NODShiLtJ_G0021558.1 mouse_genomes_project 15 8206982 8258144 + MGP_NODShiLtJ_P0040315 Gm21973 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042135.1 MGP_NODShiLtJ_G0022120.1 mouse_genomes_project 15 111287889 111288849 - MGP_NODShiLtJ_P0042135 Olfr285 protein_coding protein_coding MGP_NODShiLtJ_T0040464.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37674593 37696637 + Mtdh protein_coding retained_intron MGP_NODShiLtJ_T0040465.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37674618 37742751 + MGP_NODShiLtJ_P0040465 Mtdh protein_coding protein_coding MGP_NODShiLtJ_T0040466.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37674624 37720816 + Mtdh protein_coding retained_intron MGP_NODShiLtJ_T0040467.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37674935 37733506 + MGP_NODShiLtJ_P0040467 Mtdh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040468.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37675207 37735950 + MGP_NODShiLtJ_P0040468 Mtdh protein_coding protein_coding MGP_NODShiLtJ_T0040469.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37675218 37735981 + MGP_NODShiLtJ_P0040469 Mtdh protein_coding protein_coding MGP_NODShiLtJ_T0040470.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37675221 37720218 + MGP_NODShiLtJ_P0040470 Mtdh protein_coding protein_coding MGP_NODShiLtJ_T0040471.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37675750 37713132 + Mtdh protein_coding processed_transcript MGP_NODShiLtJ_T0040472.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37710191 37739881 + MGP_NODShiLtJ_P0040472 Mtdh protein_coding protein_coding MGP_NODShiLtJ_T0040473.1 MGP_NODShiLtJ_G0021613.1 mouse_genomes_project 15 37731525 37740461 + Mtdh protein_coding processed_transcript MGP_NODShiLtJ_T0041444.1 MGP_NODShiLtJ_G0021915.1 mouse_genomes_project 15 90895670 90909709 - MGP_NODShiLtJ_P0041444 Dnal4 protein_coding protein_coding MGP_NODShiLtJ_T0041445.1 MGP_NODShiLtJ_G0021915.1 mouse_genomes_project 15 90895673 90909793 - MGP_NODShiLtJ_P0041445 Dnal4 protein_coding protein_coding MGP_NODShiLtJ_T0041446.1 MGP_NODShiLtJ_G0021915.1 mouse_genomes_project 15 90899203 90912298 - Dnal4 protein_coding processed_transcript MGP_NODShiLtJ_T0041447.1 MGP_NODShiLtJ_G0021915.1 mouse_genomes_project 15 90909897 90913175 - Dnal4 protein_coding processed_transcript MGP_NODShiLtJ_T0042150.1 MGP_NODShiLtJ_G0022127.1 mouse_genomes_project 15 111482563 111490562 + MGP_NODShiLtJ_P0042150 Olfr279 protein_coding protein_coding MGP_NODShiLtJ_T0042151.1 MGP_NODShiLtJ_G0022127.1 mouse_genomes_project 15 111489629 111490562 + MGP_NODShiLtJ_P0042151 Olfr279 protein_coding protein_coding MGP_NODShiLtJ_T0012944.1 MGP_NODShiLtJ_G0011052.1 mouse_genomes_project 15 28195515 28195843 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041234.1 MGP_NODShiLtJ_G0021851.1 mouse_genomes_project 15 87746561 87747957 + MGP_NODShiLtJ_P0041234 Commd5 protein_coding protein_coding MGP_NODShiLtJ_T0041235.1 MGP_NODShiLtJ_G0021851.1 mouse_genomes_project 15 87746587 87747843 + MGP_NODShiLtJ_P0041235 Commd5 protein_coding protein_coding MGP_NODShiLtJ_T0042109.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 110983454 111041933 - MGP_NODShiLtJ_P0042109 Senp1 protein_coding protein_coding MGP_NODShiLtJ_T0042110.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 110985941 111011866 - Senp1 protein_coding retained_intron MGP_NODShiLtJ_T0042111.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 110986102 111042803 - MGP_NODShiLtJ_P0042111 Senp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042112.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 110986442 111042485 - MGP_NODShiLtJ_P0042112 Senp1 protein_coding protein_coding MGP_NODShiLtJ_T0042113.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 110987593 110994980 - Senp1 protein_coding processed_transcript MGP_NODShiLtJ_T0042114.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 111010732 111042604 - Senp1 protein_coding retained_intron MGP_NODShiLtJ_T0042115.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 111034282 111036785 - MGP_NODShiLtJ_P0042115 Senp1 protein_coding protein_coding MGP_NODShiLtJ_T0042116.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 111037797 111042539 - Senp1 protein_coding processed_transcript MGP_NODShiLtJ_T0042117.1 MGP_NODShiLtJ_G0022112.1 mouse_genomes_project 15 111038431 111042121 - Senp1 protein_coding processed_transcript MGP_NODShiLtJ_T0041453.1 MGP_NODShiLtJ_G0021918.1 mouse_genomes_project 15 90965445 90973545 - MGP_NODShiLtJ_P0041453 Cbx6 protein_coding protein_coding MGP_NODShiLtJ_T0041454.1 MGP_NODShiLtJ_G0021918.1 mouse_genomes_project 15 90967284 90973519 - MGP_NODShiLtJ_P0041454 Cbx6 protein_coding protein_coding MGP_NODShiLtJ_T0041455.1 MGP_NODShiLtJ_G0021918.1 mouse_genomes_project 15 90967940 90973105 - Cbx6 protein_coding processed_transcript MGP_NODShiLtJ_T0041456.1 MGP_NODShiLtJ_G0021918.1 mouse_genomes_project 15 90968081 90973588 - MGP_NODShiLtJ_P0041456 Cbx6 protein_coding protein_coding MGP_NODShiLtJ_T0041457.1 MGP_NODShiLtJ_G0021918.1 mouse_genomes_project 15 90971878 90973633 - Cbx6 protein_coding processed_transcript MGP_NODShiLtJ_T0041458.1 MGP_NODShiLtJ_G0021918.1 mouse_genomes_project 15 90972551 90973582 - Cbx6 protein_coding processed_transcript MGP_NODShiLtJ_T0040460.1 MGP_NODShiLtJ_G0021609.1 mouse_genomes_project 15 35621653 36092723 + MGP_NODShiLtJ_P0040460 Sema5a protein_coding protein_coding MGP_NODShiLtJ_T0003547.1 MGP_NODShiLtJ_G0003214.1 mouse_genomes_project 15 75479723 75497426 + Gm27153 antisense antisense MGP_NODShiLtJ_T0098914.1 MGP_NODShiLtJ_G0037308.1 mouse_genomes_project 15 92869207 92869314 + Gm22067 snRNA snRNA MGP_NODShiLtJ_T0040786.1 MGP_NODShiLtJ_G0021733.1 mouse_genomes_project 15 74058087 74194921 + MGP_NODShiLtJ_P0040786 Gm21798 protein_coding protein_coding MGP_NODShiLtJ_T0041014.1 MGP_NODShiLtJ_G0021801.1 mouse_genomes_project 15 86620496 86625660 - MGP_NODShiLtJ_P0041014 Pycrl protein_coding protein_coding MGP_NODShiLtJ_T0009972.1 MGP_NODShiLtJ_G0008105.1 mouse_genomes_project 15 91233859 91233967 - Snord43 miRNA miRNA MGP_NODShiLtJ_T0042099.1 MGP_NODShiLtJ_G0022110.1 mouse_genomes_project 15 110902907 110909745 + MGP_NODShiLtJ_P0042099 Tmem106c protein_coding protein_coding MGP_NODShiLtJ_T0040397.1 MGP_NODShiLtJ_G0021583.1 mouse_genomes_project 15 21622526 21624058 - MGP_NODShiLtJ_P0040397 Acot10 protein_coding protein_coding MGP_NODShiLtJ_T0040576.1 MGP_NODShiLtJ_G0021648.1 mouse_genomes_project 15 43168638 43180903 + MGP_NODShiLtJ_P0040576 Cthrc1 protein_coding protein_coding MGP_NODShiLtJ_T0040577.1 MGP_NODShiLtJ_G0021648.1 mouse_genomes_project 15 43168787 43174885 + Cthrc1 protein_coding processed_transcript MGP_NODShiLtJ_T0040578.1 MGP_NODShiLtJ_G0021648.1 mouse_genomes_project 15 43177862 43180905 + Cthrc1 protein_coding retained_intron MGP_NODShiLtJ_T0041208.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543607 87546543 + MGP_NODShiLtJ_P0041208 Lrrc14 protein_coding protein_coding MGP_NODShiLtJ_T0041209.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543622 87550671 + MGP_NODShiLtJ_P0041209 Lrrc14 protein_coding protein_coding MGP_NODShiLtJ_T0041210.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543623 87548008 + MGP_NODShiLtJ_P0041210 Lrrc14 protein_coding protein_coding MGP_NODShiLtJ_T0041211.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543627 87548057 + MGP_NODShiLtJ_P0041211 Lrrc14 protein_coding protein_coding MGP_NODShiLtJ_T0041212.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543627 87548025 + MGP_NODShiLtJ_P0041212 Lrrc14 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041213.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543633 87545896 + MGP_NODShiLtJ_P0041213 Lrrc14 protein_coding protein_coding MGP_NODShiLtJ_T0041214.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543647 87548103 + Lrrc14 protein_coding retained_intron MGP_NODShiLtJ_T0041215.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543657 87549621 + Lrrc14 protein_coding retained_intron MGP_NODShiLtJ_T0041216.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543657 87547722 + Lrrc14 protein_coding processed_transcript MGP_NODShiLtJ_T0041217.1 MGP_NODShiLtJ_G0021846.1 mouse_genomes_project 15 87543715 87548064 + MGP_NODShiLtJ_P0041217 Lrrc14 protein_coding protein_coding MGP_NODShiLtJ_T0000926.1 MGP_NODShiLtJ_G0000855.1 mouse_genomes_project 15 116541235 116542261 - TEC TEC MGP_NODShiLtJ_T0009949.1 MGP_NODShiLtJ_G0008082.1 mouse_genomes_project 15 41451953 41452079 - Gm23654 miRNA miRNA MGP_NODShiLtJ_T0003549.1 MGP_NODShiLtJ_G0003216.1 mouse_genomes_project 15 76216392 76221661 - Gm17140 antisense antisense MGP_NODShiLtJ_T0000919.1 MGP_NODShiLtJ_G0000848.1 mouse_genomes_project 15 72610675 72622431 + TEC TEC MGP_NODShiLtJ_T0012972.1 MGP_NODShiLtJ_G0011080.1 mouse_genomes_project 15 86671868 86673145 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041924.1 MGP_NODShiLtJ_G0022058.1 mouse_genomes_project 15 101434634 101441760 - MGP_NODShiLtJ_P0041924 Tymp protein_coding protein_coding MGP_NODShiLtJ_T0098887.1 MGP_NODShiLtJ_G0037281.1 mouse_genomes_project 15 40130888 40131047 + Gm22979 snRNA snRNA MGP_NODShiLtJ_T0040441.1 MGP_NODShiLtJ_G0021602.1 mouse_genomes_project 15 34552712 34636421 - MGP_NODShiLtJ_P0040441 Ankrd33b protein_coding protein_coding MGP_NODShiLtJ_T0040442.1 MGP_NODShiLtJ_G0021602.1 mouse_genomes_project 15 34552721 34636454 - MGP_NODShiLtJ_P0040442 Ankrd33b protein_coding protein_coding MGP_NODShiLtJ_T0040443.1 MGP_NODShiLtJ_G0021602.1 mouse_genomes_project 15 34554068 34636227 - MGP_NODShiLtJ_P0040443 Ankrd33b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040444.1 MGP_NODShiLtJ_G0021602.1 mouse_genomes_project 15 34554977 34636421 - MGP_NODShiLtJ_P0040444 Ankrd33b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040445.1 MGP_NODShiLtJ_G0021602.1 mouse_genomes_project 15 34586546 34636263 - MGP_NODShiLtJ_P0040445 Ankrd33b protein_coding protein_coding MGP_NODShiLtJ_T0041923.1 MGP_NODShiLtJ_G0022057.1 mouse_genomes_project 15 101434342 101436522 - MGP_NODShiLtJ_P0041923 Sco2 protein_coding protein_coding MGP_NODShiLtJ_T0100170.1 MGP_NODShiLtJ_G0038564.1 mouse_genomes_project 15 60454395 60454527 + Gm23267 snoRNA snoRNA MGP_NODShiLtJ_T0041260.1 MGP_NODShiLtJ_G0021862.1 mouse_genomes_project 15 88667429 88750100 - MGP_NODShiLtJ_P0041260 Myh9 protein_coding protein_coding MGP_NODShiLtJ_T0041261.1 MGP_NODShiLtJ_G0021862.1 mouse_genomes_project 15 88672168 88674066 - Myh9 protein_coding retained_intron MGP_NODShiLtJ_T0041262.1 MGP_NODShiLtJ_G0021862.1 mouse_genomes_project 15 88695060 88749981 - Myh9 protein_coding retained_intron MGP_NODShiLtJ_T0041263.1 MGP_NODShiLtJ_G0021862.1 mouse_genomes_project 15 88697092 88750030 - Myh9 protein_coding retained_intron MGP_NODShiLtJ_T0041264.1 MGP_NODShiLtJ_G0021862.1 mouse_genomes_project 15 88697608 88749972 - MGP_NODShiLtJ_P0041264 Myh9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041265.1 MGP_NODShiLtJ_G0021862.1 mouse_genomes_project 15 88701548 88720334 - Myh9 protein_coding processed_transcript MGP_NODShiLtJ_T0041266.1 MGP_NODShiLtJ_G0021862.1 mouse_genomes_project 15 88712458 88750030 - Myh9 protein_coding retained_intron MGP_NODShiLtJ_T0040534.1 MGP_NODShiLtJ_G0021635.1 mouse_genomes_project 15 40896068 40905384 - MGP_NODShiLtJ_P0040534 Gm10384 protein_coding protein_coding MGP_NODShiLtJ_T0042206.1 MGP_NODShiLtJ_G0022149.1 mouse_genomes_project 15 112151369 112162167 + MGP_NODShiLtJ_P0042206 Troap protein_coding protein_coding MGP_NODShiLtJ_T0041258.1 MGP_NODShiLtJ_G0021861.1 mouse_genomes_project 15 88650795 88656784 - MGP_NODShiLtJ_P0041258 Apol8 protein_coding protein_coding MGP_NODShiLtJ_T0041259.1 MGP_NODShiLtJ_G0021861.1 mouse_genomes_project 15 88651610 88658975 - MGP_NODShiLtJ_P0041259 Apol8 protein_coding protein_coding MGP_NODShiLtJ_T0040765.1 MGP_NODShiLtJ_G0021730.1 mouse_genomes_project 15 73069949 73115472 - MGP_NODShiLtJ_P0040765 Fam49b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041090.1 MGP_NODShiLtJ_G0021819.1 mouse_genomes_project 15 87087924 87091191 + MGP_NODShiLtJ_P0041090 Exosc4 protein_coding protein_coding MGP_NODShiLtJ_T0041091.1 MGP_NODShiLtJ_G0021819.1 mouse_genomes_project 15 87088118 87089609 + Exosc4 protein_coding processed_transcript MGP_NODShiLtJ_T0042563.1 MGP_NODShiLtJ_G0022269.1 mouse_genomes_project 15 116809557 116811749 - MGP_NODShiLtJ_P0042563 Gpr84 protein_coding protein_coding MGP_NODShiLtJ_T0012987.1 MGP_NODShiLtJ_G0011095.1 mouse_genomes_project 15 104172490 104173027 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100173.1 MGP_NODShiLtJ_G0038567.1 mouse_genomes_project 15 66686428 66686555 + Gm22488 snoRNA snoRNA MGP_NODShiLtJ_T0040611.1 MGP_NODShiLtJ_G0021666.1 mouse_genomes_project 15 49646417 49655991 + MGP_NODShiLtJ_P0040611 Eny2 protein_coding protein_coding MGP_NODShiLtJ_T0098279.1 MGP_NODShiLtJ_G0036687.1 mouse_genomes_project 15 41885086 41888117 - Gm15940 sense_intronic sense_intronic MGP_NODShiLtJ_T0041740.1 MGP_NODShiLtJ_G0022000.1 mouse_genomes_project 15 95739121 95769458 - MGP_NODShiLtJ_P0041740 Sult4a1 protein_coding protein_coding MGP_NODShiLtJ_T0006706.1 MGP_NODShiLtJ_G0005531.1 mouse_genomes_project 15 63194466 63206835 + Gm26684 lincRNA lincRNA MGP_NODShiLtJ_T0042382.1 MGP_NODShiLtJ_G0022199.1 mouse_genomes_project 15 114520874 114529201 + MGP_NODShiLtJ_P0042382 Grasp protein_coding protein_coding MGP_NODShiLtJ_T0042303.1 MGP_NODShiLtJ_G0022181.1 mouse_genomes_project 15 113517229 113528007 + MGP_NODShiLtJ_P0042303 protein_coding protein_coding MGP_NODShiLtJ_T0041643.1 MGP_NODShiLtJ_G0021964.1 mouse_genomes_project 15 93537741 93543584 - MGP_NODShiLtJ_P0041643 Shisa8 protein_coding protein_coding MGP_NODShiLtJ_T0040484.1 MGP_NODShiLtJ_G0021618.1 mouse_genomes_project 15 38089600 38111569 + MGP_NODShiLtJ_P0040484 Erich5 protein_coding protein_coding MGP_NODShiLtJ_T0041022.1 MGP_NODShiLtJ_G0021805.1 mouse_genomes_project 15 86684433 86687017 - MGP_NODShiLtJ_P0041022 Ccdc166 protein_coding protein_coding MGP_NODShiLtJ_T0041023.1 MGP_NODShiLtJ_G0021805.1 mouse_genomes_project 15 86685328 86687004 - MGP_NODShiLtJ_P0041023 Ccdc166 protein_coding protein_coding MGP_NODShiLtJ_T0041504.1 MGP_NODShiLtJ_G0021930.1 mouse_genomes_project 15 91633042 91756743 - MGP_NODShiLtJ_P0041504 Enthd1 protein_coding protein_coding MGP_NODShiLtJ_T0100191.1 MGP_NODShiLtJ_G0038585.1 mouse_genomes_project 15 112352641 112352774 - Gm25999 snoRNA snoRNA MGP_NODShiLtJ_T0012990.1 MGP_NODShiLtJ_G0011098.1 mouse_genomes_project 15 112950073 112950367 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042031.1 MGP_NODShiLtJ_G0022087.1 mouse_genomes_project 15 107154832 107175643 - MGP_NODShiLtJ_P0042031 Pus7l protein_coding protein_coding MGP_NODShiLtJ_T0042032.1 MGP_NODShiLtJ_G0022087.1 mouse_genomes_project 15 107168269 107175589 - Pus7l protein_coding retained_intron MGP_NODShiLtJ_T0042033.1 MGP_NODShiLtJ_G0022087.1 mouse_genomes_project 15 107172833 107175582 - MGP_NODShiLtJ_P0042033 Pus7l protein_coding protein_coding MGP_NODShiLtJ_T0040390.1 MGP_NODShiLtJ_G0021582.1 mouse_genomes_project 15 19181021 19431743 + MGP_NODShiLtJ_P0040390 Cdh10 protein_coding protein_coding MGP_NODShiLtJ_T0040391.1 MGP_NODShiLtJ_G0021582.1 mouse_genomes_project 15 19181032 19295041 + Cdh10 protein_coding retained_intron MGP_NODShiLtJ_T0040392.1 MGP_NODShiLtJ_G0021582.1 mouse_genomes_project 15 19181051 19365287 + Cdh10 protein_coding retained_intron MGP_NODShiLtJ_T0040393.1 MGP_NODShiLtJ_G0021582.1 mouse_genomes_project 15 19182403 19431743 + MGP_NODShiLtJ_P0040393 Cdh10 protein_coding protein_coding MGP_NODShiLtJ_T0040394.1 MGP_NODShiLtJ_G0021582.1 mouse_genomes_project 15 19290751 19427790 + MGP_NODShiLtJ_P0040394 Cdh10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0040395.1 MGP_NODShiLtJ_G0021582.1 mouse_genomes_project 15 19291444 19427790 + MGP_NODShiLtJ_P0040395 Cdh10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040396.1 MGP_NODShiLtJ_G0021582.1 mouse_genomes_project 15 19411254 19431743 + Cdh10 protein_coding retained_intron MGP_NODShiLtJ_T0042285.1 MGP_NODShiLtJ_G0022174.1 mouse_genomes_project 15 113141148 113192744 + MGP_NODShiLtJ_P0042285 Larp4 protein_coding protein_coding MGP_NODShiLtJ_T0042286.1 MGP_NODShiLtJ_G0022174.1 mouse_genomes_project 15 113143868 113192744 + MGP_NODShiLtJ_P0042286 Larp4 protein_coding protein_coding MGP_NODShiLtJ_T0040718.1 MGP_NODShiLtJ_G0021704.1 mouse_genomes_project 15 66620550 66665947 - MGP_NODShiLtJ_P0040718 Atad2 protein_coding protein_coding MGP_NODShiLtJ_T0009991.1 MGP_NODShiLtJ_G0008124.1 mouse_genomes_project 15 101207841 101207902 - Mir7118 miRNA miRNA MGP_NODShiLtJ_T0009969.1 MGP_NODShiLtJ_G0008102.1 mouse_genomes_project 15 90575429 90575506 + Gm44302 miRNA miRNA MGP_NODShiLtJ_T0041824.1 MGP_NODShiLtJ_G0022033.1 mouse_genomes_project 15 100601318 100602687 + MGP_NODShiLtJ_P0041824 Zdhhc25 protein_coding protein_coding MGP_NODShiLtJ_T0042537.1 MGP_NODShiLtJ_G0022261.1 mouse_genomes_project 15 116470920 116474119 + MGP_NODShiLtJ_P0042537 Hoxc8 protein_coding protein_coding MGP_NODShiLtJ_T0042538.1 MGP_NODShiLtJ_G0022261.1 mouse_genomes_project 15 116472202 116474407 + Hoxc8 protein_coding retained_intron MGP_NODShiLtJ_T0041151.1 MGP_NODShiLtJ_G0021831.1 mouse_genomes_project 15 87284324 87295126 - MGP_NODShiLtJ_P0041151 Dgat1 protein_coding protein_coding MGP_NODShiLtJ_T0041152.1 MGP_NODShiLtJ_G0021831.1 mouse_genomes_project 15 87284326 87285490 - Dgat1 protein_coding retained_intron MGP_NODShiLtJ_T0041153.1 MGP_NODShiLtJ_G0021831.1 mouse_genomes_project 15 87284377 87285624 - Dgat1 protein_coding retained_intron MGP_NODShiLtJ_T0041154.1 MGP_NODShiLtJ_G0021831.1 mouse_genomes_project 15 87284833 87286255 - MGP_NODShiLtJ_P0041154 Dgat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041155.1 MGP_NODShiLtJ_G0021831.1 mouse_genomes_project 15 87285585 87288915 - MGP_NODShiLtJ_P0041155 Dgat1 protein_coding protein_coding MGP_NODShiLtJ_T0041156.1 MGP_NODShiLtJ_G0021831.1 mouse_genomes_project 15 87285900 87286632 - Dgat1 protein_coding retained_intron MGP_NODShiLtJ_T0041157.1 MGP_NODShiLtJ_G0021831.1 mouse_genomes_project 15 87286211 87287505 - Dgat1 protein_coding retained_intron MGP_NODShiLtJ_T0041158.1 MGP_NODShiLtJ_G0021831.1 mouse_genomes_project 15 87286261 87286973 - Dgat1 protein_coding retained_intron MGP_NODShiLtJ_T0040423.1 MGP_NODShiLtJ_G0021591.1 mouse_genomes_project 15 28529712 28543829 + MGP_NODShiLtJ_P0040423 Zfp622 protein_coding protein_coding MGP_NODShiLtJ_T0003583.1 MGP_NODShiLtJ_G0003241.1 mouse_genomes_project 15 113143249 113144373 - 2310068J16Rik antisense antisense MGP_NODShiLtJ_T0040203.1 MGP_NODShiLtJ_G0021530.1 mouse_genomes_project 15 2240008 2255612 - MGP_NODShiLtJ_P0040203 Card6 protein_coding protein_coding MGP_NODShiLtJ_T0040204.1 MGP_NODShiLtJ_G0021530.1 mouse_genomes_project 15 2252195 2255557 - MGP_NODShiLtJ_P0040204 Card6 protein_coding protein_coding MGP_NODShiLtJ_T0017322.1 MGP_NODShiLtJ_G0015167.1 mouse_genomes_project 15 76455915 76499574 + Gm2895 processed_transcript processed_transcript MGP_NODShiLtJ_T0042274.1 MGP_NODShiLtJ_G0022171.1 mouse_genomes_project 15 112869149 112908434 - MGP_NODShiLtJ_P0042274 Cers5 protein_coding protein_coding MGP_NODShiLtJ_T0042275.1 MGP_NODShiLtJ_G0022171.1 mouse_genomes_project 15 112869579 112908437 - MGP_NODShiLtJ_P0042275 Cers5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042276.1 MGP_NODShiLtJ_G0022171.1 mouse_genomes_project 15 112869860 112908573 - MGP_NODShiLtJ_P0042276 Cers5 protein_coding protein_coding MGP_NODShiLtJ_T0042277.1 MGP_NODShiLtJ_G0022171.1 mouse_genomes_project 15 112871603 112881354 - MGP_NODShiLtJ_P0042277 Cers5 protein_coding protein_coding MGP_NODShiLtJ_T0042278.1 MGP_NODShiLtJ_G0022171.1 mouse_genomes_project 15 112873676 112908857 - MGP_NODShiLtJ_P0042278 Cers5 protein_coding protein_coding MGP_NODShiLtJ_T0042279.1 MGP_NODShiLtJ_G0022171.1 mouse_genomes_project 15 112880239 112908064 - MGP_NODShiLtJ_P0042279 Cers5 protein_coding protein_coding MGP_NODShiLtJ_T0040316.1 MGP_NODShiLtJ_G0021559.1 mouse_genomes_project 15 8239186 8258778 + MGP_NODShiLtJ_P0040316 Agxt2 protein_coding protein_coding MGP_NODShiLtJ_T0040317.1 MGP_NODShiLtJ_G0021559.1 mouse_genomes_project 15 8239191 8297964 + MGP_NODShiLtJ_P0040317 Agxt2 protein_coding protein_coding MGP_NODShiLtJ_T0040318.1 MGP_NODShiLtJ_G0021559.1 mouse_genomes_project 15 8239191 8265885 + MGP_NODShiLtJ_P0040318 Agxt2 protein_coding protein_coding MGP_NODShiLtJ_T0040319.1 MGP_NODShiLtJ_G0021559.1 mouse_genomes_project 15 8239233 8297549 + MGP_NODShiLtJ_P0040319 Agxt2 protein_coding protein_coding MGP_NODShiLtJ_T0040725.1 MGP_NODShiLtJ_G0021710.1 mouse_genomes_project 15 67086265 67251196 + MGP_NODShiLtJ_P0040725 Fer1l6 protein_coding protein_coding MGP_NODShiLtJ_T0040726.1 MGP_NODShiLtJ_G0021710.1 mouse_genomes_project 15 67224574 67233151 + Fer1l6 protein_coding processed_transcript MGP_NODShiLtJ_T0040727.1 MGP_NODShiLtJ_G0021710.1 mouse_genomes_project 15 67235473 67253355 + Fer1l6 protein_coding retained_intron MGP_NODShiLtJ_T0042426.1 MGP_NODShiLtJ_G0022232.1 mouse_genomes_project 15 115555609 115569371 + MGP_NODShiLtJ_P0042426 Soat2 protein_coding protein_coding MGP_NODShiLtJ_T0042427.1 MGP_NODShiLtJ_G0022232.1 mouse_genomes_project 15 115556199 115569029 + MGP_NODShiLtJ_P0042427 Soat2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041505.1 MGP_NODShiLtJ_G0021931.1 mouse_genomes_project 15 91824938 91856700 + MGP_NODShiLtJ_P0041505 Grap2 protein_coding protein_coding MGP_NODShiLtJ_T0042034.1 MGP_NODShiLtJ_G0022088.1 mouse_genomes_project 15 107175729 107202707 + MGP_NODShiLtJ_P0042034 Irak4 protein_coding protein_coding MGP_NODShiLtJ_T0042035.1 MGP_NODShiLtJ_G0022088.1 mouse_genomes_project 15 107175738 107203980 + MGP_NODShiLtJ_P0042035 Irak4 protein_coding protein_coding MGP_NODShiLtJ_T0042036.1 MGP_NODShiLtJ_G0022088.1 mouse_genomes_project 15 107175748 107191775 + Irak4 protein_coding retained_intron MGP_NODShiLtJ_T0010002.1 MGP_NODShiLtJ_G0008135.1 mouse_genomes_project 15 114984483 115034433 + miRNA miRNA MGP_NODShiLtJ_T0042001.1 MGP_NODShiLtJ_G0022079.1 mouse_genomes_project 15 104445472 104680810 + Cntn1 protein_coding retained_intron MGP_NODShiLtJ_T0042002.1 MGP_NODShiLtJ_G0022079.1 mouse_genomes_project 15 104445472 104784796 + MGP_NODShiLtJ_P0042002 Cntn1 protein_coding protein_coding MGP_NODShiLtJ_T0042003.1 MGP_NODShiLtJ_G0022079.1 mouse_genomes_project 15 104546006 104784783 + MGP_NODShiLtJ_P0042003 Cntn1 protein_coding protein_coding MGP_NODShiLtJ_T0042004.1 MGP_NODShiLtJ_G0022079.1 mouse_genomes_project 15 104581315 104782946 + MGP_NODShiLtJ_P0042004 Cntn1 protein_coding protein_coding MGP_NODShiLtJ_T0042005.1 MGP_NODShiLtJ_G0022079.1 mouse_genomes_project 15 104638248 104720011 + MGP_NODShiLtJ_P0042005 Cntn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0012973.1 MGP_NODShiLtJ_G0011081.1 mouse_genomes_project 15 87629107 87629462 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041179.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87433173 87437113 - MGP_NODShiLtJ_P0041179 Tonsl protein_coding protein_coding MGP_NODShiLtJ_T0041180.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87437087 87440369 - MGP_NODShiLtJ_P0041180 Tonsl protein_coding protein_coding MGP_NODShiLtJ_T0041181.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87437316 87452108 - MGP_NODShiLtJ_P0041181 Tonsl protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041182.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87437323 87452188 - MGP_NODShiLtJ_P0041182 Tonsl protein_coding protein_coding MGP_NODShiLtJ_T0041183.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87437324 87440450 - Tonsl protein_coding retained_intron MGP_NODShiLtJ_T0041184.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87443838 87444742 - MGP_NODShiLtJ_P0041184 Tonsl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041185.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87443871 87452159 - MGP_NODShiLtJ_P0041185 Tonsl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0041186.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87449417 87450509 - Tonsl protein_coding retained_intron MGP_NODShiLtJ_T0041187.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87450786 87451868 - Tonsl protein_coding retained_intron MGP_NODShiLtJ_T0041188.1 MGP_NODShiLtJ_G0021838.1 mouse_genomes_project 15 87451088 87452070 - MGP_NODShiLtJ_P0041188 Tonsl protein_coding protein_coding MGP_NODShiLtJ_T0012942.1 MGP_NODShiLtJ_G0011050.1 mouse_genomes_project 15 18285708 18286892 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0041641.1 MGP_NODShiLtJ_G0021962.1 mouse_genomes_project 15 93455128 93469421 + MGP_NODShiLtJ_P0041641 Ccdc134 protein_coding protein_coding MGP_NODShiLtJ_T0009942.1 MGP_NODShiLtJ_G0008075.1 mouse_genomes_project 15 30234078 30234143 + Mir7117 miRNA miRNA MGP_NODShiLtJ_T0041636.1 MGP_NODShiLtJ_G0021961.1 mouse_genomes_project 15 93386682 93453866 + MGP_NODShiLtJ_P0041636 Mei1 protein_coding protein_coding MGP_NODShiLtJ_T0041637.1 MGP_NODShiLtJ_G0021961.1 mouse_genomes_project 15 93386839 93454030 + MGP_NODShiLtJ_P0041637 Mei1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0041638.1 MGP_NODShiLtJ_G0021961.1 mouse_genomes_project 15 93400237 93454016 + MGP_NODShiLtJ_P0041638 Mei1 protein_coding protein_coding MGP_NODShiLtJ_T0041639.1 MGP_NODShiLtJ_G0021961.1 mouse_genomes_project 15 93400249 93454018 + MGP_NODShiLtJ_P0041639 Mei1 protein_coding protein_coding MGP_NODShiLtJ_T0041640.1 MGP_NODShiLtJ_G0021961.1 mouse_genomes_project 15 93400950 93453943 + MGP_NODShiLtJ_P0041640 Mei1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0040424.1 MGP_NODShiLtJ_G0021592.1 mouse_genomes_project 15 28867265 28870589 + March11 protein_coding retained_intron MGP_NODShiLtJ_T0040425.1 MGP_NODShiLtJ_G0021592.1 mouse_genomes_project 15 28867479 28990465 + MGP_NODShiLtJ_P0040425 March11 protein_coding protein_coding MGP_NODShiLtJ_T0040426.1 MGP_NODShiLtJ_G0021592.1 mouse_genomes_project 15 28964204 28990622 + March11 protein_coding retained_intron MGP_NODShiLtJ_T0040651.1 MGP_NODShiLtJ_G0021682.1 mouse_genomes_project 15 62409667 62440678 - MGP_NODShiLtJ_P0040651 Tnfrsf11b protein_coding protein_coding MGP_NODShiLtJ_T0003618.1 MGP_NODShiLtJ_G0003271.1 mouse_genomes_project 16 35753660 35773167 - Gm15564 antisense antisense MGP_NODShiLtJ_T0003619.1 MGP_NODShiLtJ_G0003271.1 mouse_genomes_project 16 35753661 35775035 - Gm15564 antisense antisense MGP_NODShiLtJ_T0003620.1 MGP_NODShiLtJ_G0003271.1 mouse_genomes_project 16 35753683 35773227 - Gm15564 antisense antisense MGP_NODShiLtJ_T0013061.1 MGP_NODShiLtJ_G0011169.1 mouse_genomes_project 16 52608274 52609613 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044419.1 MGP_NODShiLtJ_G0022724.1 mouse_genomes_project 16 60571629 60629904 - MGP_NODShiLtJ_P0044419 Tbc1d23 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044420.1 MGP_NODShiLtJ_G0022724.1 mouse_genomes_project 16 60571634 60630004 - MGP_NODShiLtJ_P0044420 Tbc1d23 protein_coding protein_coding MGP_NODShiLtJ_T0013008.1 MGP_NODShiLtJ_G0011116.1 mouse_genomes_project 16 11388374 11389490 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043878.1 MGP_NODShiLtJ_G0022584.1 mouse_genomes_project 16 32963246 33098972 + MGP_NODShiLtJ_P0043878 Zfp148 protein_coding protein_coding MGP_NODShiLtJ_T0043879.1 MGP_NODShiLtJ_G0022584.1 mouse_genomes_project 16 32987083 33093794 + MGP_NODShiLtJ_P0043879 Zfp148 protein_coding protein_coding MGP_NODShiLtJ_T0044891.1 MGP_NODShiLtJ_G0022887.1 mouse_genomes_project 16 105208668 105255290 + MGP_NODShiLtJ_P0044891 Clic6 protein_coding protein_coding MGP_NODShiLtJ_T0044892.1 MGP_NODShiLtJ_G0022887.1 mouse_genomes_project 16 105221901 105269000 + MGP_NODShiLtJ_P0044892 Clic6 protein_coding protein_coding MGP_NODShiLtJ_T0044400.1 MGP_NODShiLtJ_G0022717.1 mouse_genomes_project 16 59772065 60027235 + MGP_NODShiLtJ_P0044400 Abi3bp protein_coding protein_coding MGP_NODShiLtJ_T0044401.1 MGP_NODShiLtJ_G0022717.1 mouse_genomes_project 16 59772065 60027235 + MGP_NODShiLtJ_P0044401 Abi3bp protein_coding protein_coding MGP_NODShiLtJ_T0044402.1 MGP_NODShiLtJ_G0022717.1 mouse_genomes_project 16 59772065 60027235 + MGP_NODShiLtJ_P0044402 Abi3bp protein_coding protein_coding MGP_NODShiLtJ_T0044403.1 MGP_NODShiLtJ_G0022717.1 mouse_genomes_project 16 59772065 60027235 + MGP_NODShiLtJ_P0044403 Abi3bp protein_coding protein_coding MGP_NODShiLtJ_T0044404.1 MGP_NODShiLtJ_G0022717.1 mouse_genomes_project 16 59772133 60025908 + MGP_NODShiLtJ_P0044404 Abi3bp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100207.1 MGP_NODShiLtJ_G0038601.1 mouse_genomes_project 16 31453423 31453556 + Gm26419 snoRNA snoRNA MGP_NODShiLtJ_T0043522.1 MGP_NODShiLtJ_G0022490.1 mouse_genomes_project 16 19897103 19947690 - MGP_NODShiLtJ_P0043522 2510009E07Rik protein_coding protein_coding MGP_NODShiLtJ_T0044317.1 MGP_NODShiLtJ_G0022696.1 mouse_genomes_project 16 50513870 50516225 + MGP_NODShiLtJ_P0044317 Retnla protein_coding protein_coding MGP_NODShiLtJ_T0100212.1 MGP_NODShiLtJ_G0038606.1 mouse_genomes_project 16 38279435 38279567 + Gm25617 snoRNA snoRNA MGP_NODShiLtJ_T0043980.1 MGP_NODShiLtJ_G0022616.1 mouse_genomes_project 16 36331137 36403130 - MGP_NODShiLtJ_P0043980 Casr protein_coding protein_coding MGP_NODShiLtJ_T0043981.1 MGP_NODShiLtJ_G0022616.1 mouse_genomes_project 16 36331137 36403130 - MGP_NODShiLtJ_P0043981 Casr protein_coding protein_coding MGP_NODShiLtJ_T0043982.1 MGP_NODShiLtJ_G0022616.1 mouse_genomes_project 16 36331908 36402602 - MGP_NODShiLtJ_P0043982 Casr protein_coding protein_coding MGP_NODShiLtJ_T0043983.1 MGP_NODShiLtJ_G0022616.1 mouse_genomes_project 16 36355315 36403137 - Casr protein_coding processed_transcript MGP_NODShiLtJ_T0010055.1 MGP_NODShiLtJ_G0008188.1 mouse_genomes_project 16 62303806 62303902 - Gm27564 miRNA miRNA MGP_NODShiLtJ_T0043505.1 MGP_NODShiLtJ_G0022488.1 mouse_genomes_project 16 19423888 19442430 + MGP_NODShiLtJ_P0043505 Ephb3 protein_coding protein_coding MGP_NODShiLtJ_T0043506.1 MGP_NODShiLtJ_G0022488.1 mouse_genomes_project 16 19430226 19442093 + MGP_NODShiLtJ_P0043506 Ephb3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043507.1 MGP_NODShiLtJ_G0022488.1 mouse_genomes_project 16 19435942 19442431 + Ephb3 protein_coding retained_intron MGP_NODShiLtJ_T0043508.1 MGP_NODShiLtJ_G0022488.1 mouse_genomes_project 16 19440811 19441813 + Ephb3 protein_coding retained_intron MGP_NODShiLtJ_T0000280.1 MGP_NODShiLtJ_G0000218.1 mouse_genomes_project 16 5039630 5040055 + IG_V_pseudogene IG_V_pseudogene MGP_NODShiLtJ_T0043269.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16125486 16150080 - MGP_NODShiLtJ_P0043269 Tango2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043270.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16125488 16172278 - MGP_NODShiLtJ_P0043270 Tango2 protein_coding protein_coding MGP_NODShiLtJ_T0043271.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16125884 16128807 - Tango2 protein_coding retained_intron MGP_NODShiLtJ_T0043272.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16132648 16136115 - Tango2 protein_coding processed_transcript MGP_NODShiLtJ_T0043273.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16135441 16137696 - Tango2 protein_coding retained_intron MGP_NODShiLtJ_T0043274.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16135549 16179133 - MGP_NODShiLtJ_P0043274 Tango2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043275.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16135557 16172253 - MGP_NODShiLtJ_P0043275 Tango2 protein_coding protein_coding MGP_NODShiLtJ_T0043276.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16137086 16150081 - Tango2 protein_coding retained_intron MGP_NODShiLtJ_T0043277.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16140578 16150081 - Tango2 protein_coding retained_intron MGP_NODShiLtJ_T0043278.1 MGP_NODShiLtJ_G0022439.1 mouse_genomes_project 16 16146480 16179113 - Tango2 protein_coding retained_intron MGP_NODShiLtJ_T0043783.1 MGP_NODShiLtJ_G0022564.1 mouse_genomes_project 16 31675643 31689416 + MGP_NODShiLtJ_P0043783 Rnf168 protein_coding protein_coding MGP_NODShiLtJ_T0043784.1 MGP_NODShiLtJ_G0022564.1 mouse_genomes_project 16 31675645 31697816 + MGP_NODShiLtJ_P0043784 Rnf168 protein_coding protein_coding MGP_NODShiLtJ_T0043785.1 MGP_NODShiLtJ_G0022564.1 mouse_genomes_project 16 31675645 31698344 + MGP_NODShiLtJ_P0043785 Rnf168 protein_coding protein_coding MGP_NODShiLtJ_T0011302.1 MGP_NODShiLtJ_G0009435.1 mouse_genomes_project 16 49300172 49300404 + Gm25339 misc_RNA misc_RNA MGP_NODShiLtJ_T0044687.1 MGP_NODShiLtJ_G0022827.1 mouse_genomes_project 16 101105486 101105965 - MGP_NODShiLtJ_P0044687 Krtap19-2 protein_coding protein_coding MGP_NODShiLtJ_T0044706.1 MGP_NODShiLtJ_G0022844.1 mouse_genomes_project 16 101470483 101470642 + MGP_NODShiLtJ_P0044706 Gm7735 protein_coding protein_coding MGP_NODShiLtJ_T0043129.1 MGP_NODShiLtJ_G0022408.1 mouse_genomes_project 16 15153286 15180884 + MGP_NODShiLtJ_P0043129 Snap29 protein_coding protein_coding MGP_NODShiLtJ_T0013017.1 MGP_NODShiLtJ_G0011125.1 mouse_genomes_project 16 15480133 15480571 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043357.1 MGP_NODShiLtJ_G0022458.1 mouse_genomes_project 16 17508489 17509428 - MGP_NODShiLtJ_P0043357 Olfr167 protein_coding protein_coding MGP_NODShiLtJ_T0043695.1 MGP_NODShiLtJ_G0022543.1 mouse_genomes_project 16 29817212 29845248 - MGP_NODShiLtJ_P0043695 Lsg1 protein_coding protein_coding MGP_NODShiLtJ_T0043696.1 MGP_NODShiLtJ_G0022543.1 mouse_genomes_project 16 29818089 29845245 - MGP_NODShiLtJ_P0043696 Lsg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043697.1 MGP_NODShiLtJ_G0022543.1 mouse_genomes_project 16 29821396 29845219 - Lsg1 protein_coding retained_intron MGP_NODShiLtJ_T0043698.1 MGP_NODShiLtJ_G0022543.1 mouse_genomes_project 16 29821748 29824809 - Lsg1 protein_coding retained_intron MGP_NODShiLtJ_T0043699.1 MGP_NODShiLtJ_G0022543.1 mouse_genomes_project 16 29824712 29845248 - Lsg1 protein_coding retained_intron MGP_NODShiLtJ_T0043700.1 MGP_NODShiLtJ_G0022543.1 mouse_genomes_project 16 29827997 29843306 - MGP_NODShiLtJ_P0043700 Lsg1 protein_coding protein_coding MGP_NODShiLtJ_T0043701.1 MGP_NODShiLtJ_G0022543.1 mouse_genomes_project 16 29829935 29845230 - Lsg1 protein_coding retained_intron MGP_NODShiLtJ_T0043702.1 MGP_NODShiLtJ_G0022543.1 mouse_genomes_project 16 29839910 29845195 - Lsg1 protein_coding retained_intron MGP_NODShiLtJ_T0044912.1 MGP_NODShiLtJ_G0022893.1 mouse_genomes_project 16 106686967 106733225 + MGP_NODShiLtJ_P0044912 Morc3 protein_coding protein_coding MGP_NODShiLtJ_T0044913.1 MGP_NODShiLtJ_G0022893.1 mouse_genomes_project 16 106686967 106733222 + MGP_NODShiLtJ_P0044913 Morc3 protein_coding protein_coding MGP_NODShiLtJ_T0044914.1 MGP_NODShiLtJ_G0022893.1 mouse_genomes_project 16 106687081 106700713 + Morc3 protein_coding retained_intron MGP_NODShiLtJ_T0044915.1 MGP_NODShiLtJ_G0022893.1 mouse_genomes_project 16 106687103 106732180 + MGP_NODShiLtJ_P0044915 Morc3 protein_coding protein_coding MGP_NODShiLtJ_T0044916.1 MGP_NODShiLtJ_G0022893.1 mouse_genomes_project 16 106687109 106716553 + MGP_NODShiLtJ_P0044916 Morc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044917.1 MGP_NODShiLtJ_G0022893.1 mouse_genomes_project 16 106700595 106705196 + Morc3 protein_coding processed_transcript MGP_NODShiLtJ_T0044918.1 MGP_NODShiLtJ_G0022893.1 mouse_genomes_project 16 106709757 106711907 + Morc3 protein_coding retained_intron MGP_NODShiLtJ_T0042810.1 MGP_NODShiLtJ_G0022335.1 mouse_genomes_project 16 7257625 7306656 - MGP_NODShiLtJ_P0042810 Emp2 protein_coding protein_coding MGP_NODShiLtJ_T0098930.1 MGP_NODShiLtJ_G0037324.1 mouse_genomes_project 16 1611620 1611728 - Gm23483 snRNA snRNA MGP_NODShiLtJ_T0100198.1 MGP_NODShiLtJ_G0038592.1 mouse_genomes_project 16 18806101 18806176 + Snord66 snoRNA snoRNA MGP_NODShiLtJ_T0006818.1 MGP_NODShiLtJ_G0005611.1 mouse_genomes_project 16 103935159 103944346 - Gm15966 lincRNA lincRNA MGP_NODShiLtJ_T0006819.1 MGP_NODShiLtJ_G0005611.1 mouse_genomes_project 16 103935384 103941121 - Gm15966 lincRNA lincRNA MGP_NODShiLtJ_T0017346.1 MGP_NODShiLtJ_G0015181.1 mouse_genomes_project 16 15877191 15878340 + Gm15954 processed_transcript processed_transcript MGP_NODShiLtJ_T0006808.1 MGP_NODShiLtJ_G0005605.1 mouse_genomes_project 16 84962236 84972462 + Gm15555 lincRNA lincRNA MGP_NODShiLtJ_T0044505.1 MGP_NODShiLtJ_G0022760.1 mouse_genomes_project 16 63352898 63380588 - MGP_NODShiLtJ_P0044505 Arl6 protein_coding protein_coding MGP_NODShiLtJ_T0044506.1 MGP_NODShiLtJ_G0022760.1 mouse_genomes_project 16 63353277 63380812 - MGP_NODShiLtJ_P0044506 Arl6 protein_coding protein_coding MGP_NODShiLtJ_T0044507.1 MGP_NODShiLtJ_G0022760.1 mouse_genomes_project 16 63353554 63373966 - MGP_NODShiLtJ_P0044507 Arl6 protein_coding protein_coding MGP_NODShiLtJ_T0044508.1 MGP_NODShiLtJ_G0022760.1 mouse_genomes_project 16 63361071 63380550 - MGP_NODShiLtJ_P0044508 Arl6 protein_coding protein_coding MGP_NODShiLtJ_T0044662.1 MGP_NODShiLtJ_G0022810.1 mouse_genomes_project 16 99773262 99810678 + MGP_NODShiLtJ_P0044662 Bach1 protein_coding protein_coding MGP_NODShiLtJ_T0044663.1 MGP_NODShiLtJ_G0022810.1 mouse_genomes_project 16 99773282 99810421 + Bach1 protein_coding processed_transcript MGP_NODShiLtJ_T0044664.1 MGP_NODShiLtJ_G0022810.1 mouse_genomes_project 16 99773321 99800775 + Bach1 protein_coding retained_intron MGP_NODShiLtJ_T0101679.1 MGP_NODShiLtJ_G0039848.1 mouse_genomes_project 16 62600449 62602345 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098966.1 MGP_NODShiLtJ_G0037360.1 mouse_genomes_project 16 50655212 50655316 - Gm22576 snRNA snRNA MGP_NODShiLtJ_T0043625.1 MGP_NODShiLtJ_G0022523.1 mouse_genomes_project 16 25190712 25215590 + MGP_NODShiLtJ_P0043625 Cldn16 protein_coding protein_coding MGP_NODShiLtJ_T0043626.1 MGP_NODShiLtJ_G0022523.1 mouse_genomes_project 16 25190833 25215588 + MGP_NODShiLtJ_P0043626 Cldn16 protein_coding protein_coding MGP_NODShiLtJ_T0010068.1 MGP_NODShiLtJ_G0008201.1 mouse_genomes_project 16 104616948 104617026 - Gm27773 miRNA miRNA MGP_NODShiLtJ_T0043900.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33608262 33732648 - MGP_NODShiLtJ_P0043900 protein_coding protein_coding MGP_NODShiLtJ_T0043901.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33609167 33612731 - protein_coding retained_intron MGP_NODShiLtJ_T0043902.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33609499 34120594 - MGP_NODShiLtJ_P0043902 protein_coding protein_coding MGP_NODShiLtJ_T0043903.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33647632 33732541 - MGP_NODShiLtJ_P0043903 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043904.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33648860 33805671 - MGP_NODShiLtJ_P0043904 protein_coding protein_coding MGP_NODShiLtJ_T0043905.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33648865 33733751 - MGP_NODShiLtJ_P0043905 protein_coding protein_coding MGP_NODShiLtJ_T0043906.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33648865 34048107 - MGP_NODShiLtJ_P0043906 protein_coding protein_coding MGP_NODShiLtJ_T0043907.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33648874 33732689 - MGP_NODShiLtJ_P0043907 protein_coding protein_coding MGP_NODShiLtJ_T0043908.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33684850 34247534 - MGP_NODShiLtJ_P0043908 protein_coding protein_coding MGP_NODShiLtJ_T0043909.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33794415 34181290 - MGP_NODShiLtJ_P0043909 protein_coding protein_coding MGP_NODShiLtJ_T0043910.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33794416 33909954 - MGP_NODShiLtJ_P0043910 protein_coding protein_coding MGP_NODShiLtJ_T0043911.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33794426 34181328 - MGP_NODShiLtJ_P0043911 protein_coding protein_coding MGP_NODShiLtJ_T0043912.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33794486 33909719 - MGP_NODShiLtJ_P0043912 protein_coding protein_coding MGP_NODShiLtJ_T0043913.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33795791 33909947 - MGP_NODShiLtJ_P0043913 protein_coding protein_coding MGP_NODShiLtJ_T0043914.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33795858 34181186 - MGP_NODShiLtJ_P0043914 protein_coding protein_coding MGP_NODShiLtJ_T0043915.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33820373 33909593 - MGP_NODShiLtJ_P0043915 protein_coding protein_coding MGP_NODShiLtJ_T0043916.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33865519 33909664 - protein_coding retained_intron MGP_NODShiLtJ_T0043917.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 33890871 33899069 - protein_coding processed_transcript MGP_NODShiLtJ_T0043918.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 34009157 34017853 - protein_coding processed_transcript MGP_NODShiLtJ_T0043919.1 MGP_NODShiLtJ_G0022590.1 mouse_genomes_project 16 34180000 34181357 - protein_coding processed_transcript MGP_NODShiLtJ_T0011297.1 MGP_NODShiLtJ_G0009430.1 mouse_genomes_project 16 21912611 21912925 - Gm23430 misc_RNA misc_RNA MGP_NODShiLtJ_T0010013.1 MGP_NODShiLtJ_G0008146.1 mouse_genomes_project 16 7246096 7246168 + Gm22932 miRNA miRNA MGP_NODShiLtJ_T0042818.1 MGP_NODShiLtJ_G0022338.1 mouse_genomes_project 16 7418861 7445784 - MGP_NODShiLtJ_P0042818 Tvp23a protein_coding protein_coding MGP_NODShiLtJ_T0042820.1 MGP_NODShiLtJ_G0022338.1 mouse_genomes_project 16 7421548 7445566 - MGP_NODShiLtJ_P0042820 Tvp23a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042821.1 MGP_NODShiLtJ_G0022338.1 mouse_genomes_project 16 7422515 7445749 - Tvp23a protein_coding processed_transcript MGP_NODShiLtJ_T0042822.1 MGP_NODShiLtJ_G0022338.1 mouse_genomes_project 16 7424167 7427604 - Tvp23a protein_coding processed_transcript MGP_NODShiLtJ_T0042823.1 MGP_NODShiLtJ_G0022338.1 mouse_genomes_project 16 7425343 7427680 - Tvp23a protein_coding processed_transcript MGP_NODShiLtJ_T0044752.1 MGP_NODShiLtJ_G0022860.1 mouse_genomes_project 16 103502285 103511278 - MGP_NODShiLtJ_P0044752 1110004E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0044753.1 MGP_NODShiLtJ_G0022860.1 mouse_genomes_project 16 103502429 103506466 - MGP_NODShiLtJ_P0044753 1110004E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0044754.1 MGP_NODShiLtJ_G0022860.1 mouse_genomes_project 16 103502446 103511378 - MGP_NODShiLtJ_P0044754 1110004E09Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044755.1 MGP_NODShiLtJ_G0022860.1 mouse_genomes_project 16 103503595 103511174 - MGP_NODShiLtJ_P0044755 1110004E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0044756.1 MGP_NODShiLtJ_G0022860.1 mouse_genomes_project 16 103503658 103510957 - MGP_NODShiLtJ_P0044756 1110004E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0044757.1 MGP_NODShiLtJ_G0022860.1 mouse_genomes_project 16 103503856 103511277 - 1110004E09Rik protein_coding processed_transcript MGP_NODShiLtJ_T0044909.1 MGP_NODShiLtJ_G0022891.1 mouse_genomes_project 16 106531365 106538989 + MGP_NODShiLtJ_P0044909 Cbr3 protein_coding protein_coding MGP_NODShiLtJ_T0045075.1 MGP_NODShiLtJ_G0022921.1 mouse_genomes_project 16 110678507 110735567 - MGP_NODShiLtJ_P0045075 Tmprss2 protein_coding protein_coding MGP_NODShiLtJ_T0100195.1 MGP_NODShiLtJ_G0038589.1 mouse_genomes_project 16 16055683 16055809 - Gm25777 snoRNA snoRNA MGP_NODShiLtJ_T0044587.1 MGP_NODShiLtJ_G0022788.1 mouse_genomes_project 16 87150915 87159345 + MGP_NODShiLtJ_P0044587 Gm17333 protein_coding protein_coding MGP_NODShiLtJ_T0006826.1 MGP_NODShiLtJ_G0005616.1 mouse_genomes_project 16 108882291 108883622 + Gm15340 lincRNA lincRNA MGP_NODShiLtJ_T0000040.1 MGP_NODShiLtJ_G0000033.1 mouse_genomes_project 16 17125436 17125478 - MGP_NODShiLtJ_P0000040 Iglj4 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0043374.1 MGP_NODShiLtJ_G0022466.1 mouse_genomes_project 16 18159189 18191510 + MGP_NODShiLtJ_P0043374 Klhl24 protein_coding protein_coding MGP_NODShiLtJ_T0043891.1 MGP_NODShiLtJ_G0022587.1 mouse_genomes_project 16 33409900 33438369 + MGP_NODShiLtJ_P0043891 Muc13 protein_coding protein_coding MGP_NODShiLtJ_T0043892.1 MGP_NODShiLtJ_G0022587.1 mouse_genomes_project 16 33410230 33438376 + MGP_NODShiLtJ_P0043892 Muc13 protein_coding protein_coding MGP_NODShiLtJ_T0100238.1 MGP_NODShiLtJ_G0038632.1 mouse_genomes_project 16 99456839 99456975 - Gm25896 snoRNA snoRNA MGP_NODShiLtJ_T0044039.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37035723 37413765 - MGP_NODShiLtJ_P0044039 protein_coding protein_coding MGP_NODShiLtJ_T0044040.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37036049 37413765 - MGP_NODShiLtJ_P0044040 protein_coding protein_coding MGP_NODShiLtJ_T0044041.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37036437 37413804 - MGP_NODShiLtJ_P0044041 protein_coding protein_coding MGP_NODShiLtJ_T0044042.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37036437 37413800 - MGP_NODShiLtJ_P0044042 protein_coding protein_coding MGP_NODShiLtJ_T0044043.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37067873 37413765 - MGP_NODShiLtJ_P0044043 protein_coding protein_coding MGP_NODShiLtJ_T0044044.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37095605 37156871 - protein_coding processed_transcript MGP_NODShiLtJ_T0044045.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37170914 37413765 - MGP_NODShiLtJ_P0044045 protein_coding protein_coding MGP_NODShiLtJ_T0044046.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37333272 37413765 - protein_coding retained_intron MGP_NODShiLtJ_T0044047.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37397727 37413800 - protein_coding processed_transcript MGP_NODShiLtJ_T0044048.1 MGP_NODShiLtJ_G0022626.1 mouse_genomes_project 16 37411684 37413765 - protein_coding retained_intron MGP_NODShiLtJ_T0042606.1 MGP_NODShiLtJ_G0022286.1 mouse_genomes_project 16 336137 350487 - 1700037C18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0042607.1 MGP_NODShiLtJ_G0022286.1 mouse_genomes_project 16 336139 349591 - MGP_NODShiLtJ_P0042607 1700037C18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042609.1 MGP_NODShiLtJ_G0022286.1 mouse_genomes_project 16 345261 350523 - MGP_NODShiLtJ_P0042609 1700037C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0042610.1 MGP_NODShiLtJ_G0022286.1 mouse_genomes_project 16 347631 349536 - MGP_NODShiLtJ_P0042610 1700037C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0042611.1 MGP_NODShiLtJ_G0022286.1 mouse_genomes_project 16 348091 349485 - MGP_NODShiLtJ_P0042611 1700037C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0042612.1 MGP_NODShiLtJ_G0022286.1 mouse_genomes_project 16 348846 350457 - MGP_NODShiLtJ_P0042612 1700037C18Rik protein_coding protein_coding MGP_NODShiLtJ_T0045088.1 MGP_NODShiLtJ_G0022924.1 mouse_genomes_project 16 110997040 111066342 - MGP_NODShiLtJ_P0045088 C2cd2 protein_coding protein_coding MGP_NODShiLtJ_T0044811.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104299537 104335905 + MGP_NODShiLtJ_P0044811 Son protein_coding protein_coding MGP_NODShiLtJ_T0044812.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104299910 104335893 + MGP_NODShiLtJ_P0044812 Son protein_coding protein_coding MGP_NODShiLtJ_T0044813.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104299910 104335893 + MGP_NODShiLtJ_P0044813 Son protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044814.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104299910 104317776 + MGP_NODShiLtJ_P0044814 Son protein_coding protein_coding MGP_NODShiLtJ_T0044815.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104299911 104316101 + MGP_NODShiLtJ_P0044815 Son protein_coding protein_coding MGP_NODShiLtJ_T0044816.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104299916 104335919 + MGP_NODShiLtJ_P0044816 Son protein_coding protein_coding MGP_NODShiLtJ_T0044817.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104312010 104335890 + MGP_NODShiLtJ_P0044817 Son protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044818.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104316287 104328839 + Son protein_coding processed_transcript MGP_NODShiLtJ_T0044819.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104328046 104329408 + Son protein_coding processed_transcript MGP_NODShiLtJ_T0044820.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104330138 104334310 + Son protein_coding processed_transcript MGP_NODShiLtJ_T0044821.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104330368 104334818 + Son protein_coding processed_transcript MGP_NODShiLtJ_T0044822.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104330804 104335199 + Son protein_coding processed_transcript MGP_NODShiLtJ_T0044823.1 MGP_NODShiLtJ_G0022875.1 mouse_genomes_project 16 104331629 104334132 + Son protein_coding retained_intron MGP_NODShiLtJ_T0044638.1 MGP_NODShiLtJ_G0022806.1 mouse_genomes_project 16 99471228 99478380 - MGP_NODShiLtJ_P0044638 Rwdd2b protein_coding protein_coding MGP_NODShiLtJ_T0044639.1 MGP_NODShiLtJ_G0022806.1 mouse_genomes_project 16 99474515 99478380 - Rwdd2b protein_coding processed_transcript MGP_NODShiLtJ_T0042989.1 MGP_NODShiLtJ_G0022379.1 mouse_genomes_project 16 12109696 12113508 + MGP_NODShiLtJ_P0042989 Snai2 protein_coding protein_coding MGP_NODShiLtJ_T0017387.1 MGP_NODShiLtJ_G0015199.1 mouse_genomes_project 16 104345608 104374809 + Gm10785 processed_transcript processed_transcript MGP_NODShiLtJ_T0044688.1 MGP_NODShiLtJ_G0022828.1 mouse_genomes_project 16 101110179 101110705 - MGP_NODShiLtJ_P0044688 Krtap19-3 protein_coding protein_coding MGP_NODShiLtJ_T0010072.1 MGP_NODShiLtJ_G0008205.1 mouse_genomes_project 16 109054065 109054189 - Gm27833 miRNA miRNA MGP_NODShiLtJ_T0003626.1 MGP_NODShiLtJ_G0003277.1 mouse_genomes_project 16 42054553 42082889 - antisense antisense MGP_NODShiLtJ_T0010065.1 MGP_NODShiLtJ_G0008198.1 mouse_genomes_project 16 96259684 96259749 + Mir155 miRNA miRNA MGP_NODShiLtJ_T0010052.1 MGP_NODShiLtJ_G0008185.1 mouse_genomes_project 16 57571046 57571175 - Mir6238 miRNA miRNA MGP_NODShiLtJ_T0010041.1 MGP_NODShiLtJ_G0008174.1 mouse_genomes_project 16 32638032 32638117 + Mir1947 miRNA miRNA MGP_NODShiLtJ_T0100221.1 MGP_NODShiLtJ_G0038615.1 mouse_genomes_project 16 57603014 57603139 + Gm23180 snoRNA snoRNA MGP_NODShiLtJ_T0043709.1 MGP_NODShiLtJ_G0022547.1 mouse_genomes_project 16 30574723 30597690 - MGP_NODShiLtJ_P0043709 Ppp1r2 protein_coding protein_coding MGP_NODShiLtJ_T0043795.1 MGP_NODShiLtJ_G0022570.1 mouse_genomes_project 16 31917941 31929589 + MGP_NODShiLtJ_P0043795 Zdhhc19 protein_coding protein_coding MGP_NODShiLtJ_T0043796.1 MGP_NODShiLtJ_G0022570.1 mouse_genomes_project 16 31921795 31987702 + Zdhhc19 protein_coding processed_transcript MGP_NODShiLtJ_T0044313.1 MGP_NODShiLtJ_G0022692.1 mouse_genomes_project 16 49925911 49941453 + MGP_NODShiLtJ_P0044313 Dppa2 protein_coding protein_coding MGP_NODShiLtJ_T0043190.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15409995 15412941 + Ccdc74a protein_coding retained_intron MGP_NODShiLtJ_T0043191.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410000 15414264 + MGP_NODShiLtJ_P0043191 Ccdc74a protein_coding protein_coding MGP_NODShiLtJ_T0043192.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410000 15412767 + MGP_NODShiLtJ_P0043192 Ccdc74a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043193.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410076 15411999 + Ccdc74a protein_coding retained_intron MGP_NODShiLtJ_T0043194.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410089 15414263 + MGP_NODShiLtJ_P0043194 Ccdc74a protein_coding protein_coding MGP_NODShiLtJ_T0043195.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410090 15413935 + MGP_NODShiLtJ_P0043195 Ccdc74a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043196.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410138 15414264 + MGP_NODShiLtJ_P0043196 Ccdc74a protein_coding protein_coding MGP_NODShiLtJ_T0043197.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410143 15413973 + MGP_NODShiLtJ_P0043197 Ccdc74a protein_coding protein_coding MGP_NODShiLtJ_T0043198.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410198 15411387 + Ccdc74a protein_coding retained_intron MGP_NODShiLtJ_T0043199.1 MGP_NODShiLtJ_G0022417.1 mouse_genomes_project 16 15410225 15414264 + MGP_NODShiLtJ_P0043199 Ccdc74a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044178.1 MGP_NODShiLtJ_G0022661.1 mouse_genomes_project 16 45042262 45101329 - MGP_NODShiLtJ_P0044178 Atp6v1a protein_coding protein_coding MGP_NODShiLtJ_T0044179.1 MGP_NODShiLtJ_G0022661.1 mouse_genomes_project 16 45042505 45101220 - MGP_NODShiLtJ_P0044179 Atp6v1a protein_coding protein_coding MGP_NODShiLtJ_T0044180.1 MGP_NODShiLtJ_G0022661.1 mouse_genomes_project 16 45054511 45101004 - Atp6v1a protein_coding retained_intron MGP_NODShiLtJ_T0044181.1 MGP_NODShiLtJ_G0022661.1 mouse_genomes_project 16 45067453 45101654 - MGP_NODShiLtJ_P0044181 Atp6v1a protein_coding protein_coding MGP_NODShiLtJ_T0044182.1 MGP_NODShiLtJ_G0022661.1 mouse_genomes_project 16 45067576 45101042 - MGP_NODShiLtJ_P0044182 Atp6v1a protein_coding protein_coding MGP_NODShiLtJ_T0044183.1 MGP_NODShiLtJ_G0022661.1 mouse_genomes_project 16 45069646 45101729 - MGP_NODShiLtJ_P0044183 Atp6v1a protein_coding protein_coding MGP_NODShiLtJ_T0042902.1 MGP_NODShiLtJ_G0022358.1 mouse_genomes_project 16 9020502 9049583 + MGP_NODShiLtJ_P0042902 Gm9961 protein_coding protein_coding MGP_NODShiLtJ_T0013060.1 MGP_NODShiLtJ_G0011168.1 mouse_genomes_project 16 51986531 51989571 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097773.1 MGP_NODShiLtJ_G0036185.1 mouse_genomes_project 16 62728895 62729775 - pseudogene pseudogene MGP_NODShiLtJ_T0000953.1 MGP_NODShiLtJ_G0000880.1 mouse_genomes_project 16 86951393 86953526 + TEC TEC MGP_NODShiLtJ_T0006764.1 MGP_NODShiLtJ_G0005570.1 mouse_genomes_project 16 8243977 8262279 + 4930509G22Rik lincRNA lincRNA MGP_NODShiLtJ_T0000937.1 MGP_NODShiLtJ_G0000865.1 mouse_genomes_project 16 51101375 51102864 - TEC TEC MGP_NODShiLtJ_T0043326.1 MGP_NODShiLtJ_G0022449.1 mouse_genomes_project 16 16667276 16702460 - MGP_NODShiLtJ_P0043326 Cdc45 protein_coding protein_coding MGP_NODShiLtJ_T0043327.1 MGP_NODShiLtJ_G0022449.1 mouse_genomes_project 16 16667282 16702114 - MGP_NODShiLtJ_P0043327 Cdc45 protein_coding protein_coding MGP_NODShiLtJ_T0043328.1 MGP_NODShiLtJ_G0022449.1 mouse_genomes_project 16 16697843 16702475 - MGP_NODShiLtJ_P0043328 Cdc45 protein_coding protein_coding MGP_NODShiLtJ_T0043790.1 MGP_NODShiLtJ_G0022568.1 mouse_genomes_project 16 31849264 31871281 + Pcyt1a protein_coding retained_intron MGP_NODShiLtJ_T0043791.1 MGP_NODShiLtJ_G0022568.1 mouse_genomes_project 16 31849275 31894011 + MGP_NODShiLtJ_P0043791 Pcyt1a protein_coding protein_coding MGP_NODShiLtJ_T0043792.1 MGP_NODShiLtJ_G0022568.1 mouse_genomes_project 16 31849286 31874469 + Pcyt1a protein_coding retained_intron MGP_NODShiLtJ_T0043793.1 MGP_NODShiLtJ_G0022568.1 mouse_genomes_project 16 31849346 31874339 + Pcyt1a protein_coding retained_intron MGP_NODShiLtJ_T0044578.1 MGP_NODShiLtJ_G0022784.1 mouse_genomes_project 16 85271369 85360767 - MGP_NODShiLtJ_P0044578 Nrip1 protein_coding protein_coding MGP_NODShiLtJ_T0044579.1 MGP_NODShiLtJ_G0022784.1 mouse_genomes_project 16 85275785 85359989 - MGP_NODShiLtJ_P0044579 Nrip1 protein_coding protein_coding MGP_NODShiLtJ_T0044580.1 MGP_NODShiLtJ_G0022784.1 mouse_genomes_project 16 85279569 85308956 - MGP_NODShiLtJ_P0044580 Nrip1 protein_coding protein_coding MGP_NODShiLtJ_T0044581.1 MGP_NODShiLtJ_G0022784.1 mouse_genomes_project 16 85314383 85359977 - Nrip1 protein_coding retained_intron MGP_NODShiLtJ_T0044582.1 MGP_NODShiLtJ_G0022784.1 mouse_genomes_project 16 85314595 85359980 - Nrip1 protein_coding retained_intron MGP_NODShiLtJ_T0044583.1 MGP_NODShiLtJ_G0022784.1 mouse_genomes_project 16 85337874 85359989 - Nrip1 protein_coding retained_intron MGP_NODShiLtJ_T0098955.1 MGP_NODShiLtJ_G0037349.1 mouse_genomes_project 16 36054984 36055089 - Gm24801 snRNA snRNA MGP_NODShiLtJ_T0006802.1 MGP_NODShiLtJ_G0005600.1 mouse_genomes_project 16 60254342 60266929 + lincRNA lincRNA MGP_NODShiLtJ_T0044591.1 MGP_NODShiLtJ_G0022790.1 mouse_genomes_project 16 87738585 87757229 - MGP_NODShiLtJ_P0044591 Gm7334 protein_coding protein_coding MGP_NODShiLtJ_T0044079.1 MGP_NODShiLtJ_G0022638.1 mouse_genomes_project 16 38487824 38493580 + MGP_NODShiLtJ_P0044079 protein_coding protein_coding MGP_NODShiLtJ_T0044080.1 MGP_NODShiLtJ_G0022638.1 mouse_genomes_project 16 38487829 38493558 + protein_coding processed_transcript MGP_NODShiLtJ_T0044081.1 MGP_NODShiLtJ_G0022638.1 mouse_genomes_project 16 38487855 38493561 + MGP_NODShiLtJ_P0044081 protein_coding protein_coding MGP_NODShiLtJ_T0044082.1 MGP_NODShiLtJ_G0022638.1 mouse_genomes_project 16 38487873 38493548 + protein_coding retained_intron MGP_NODShiLtJ_T0044084.1 MGP_NODShiLtJ_G0022638.1 mouse_genomes_project 16 38490074 38493540 + protein_coding retained_intron MGP_NODShiLtJ_T0044085.1 MGP_NODShiLtJ_G0022638.1 mouse_genomes_project 16 38490126 38493562 + protein_coding processed_transcript MGP_NODShiLtJ_T0044363.1 MGP_NODShiLtJ_G0022709.1 mouse_genomes_project 16 59049446 59105473 - MGP_NODShiLtJ_P0044363 Nxpe3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100205.1 MGP_NODShiLtJ_G0038599.1 mouse_genomes_project 16 30176069 30176204 + Gm25375 snoRNA snoRNA MGP_NODShiLtJ_T0003622.1 MGP_NODShiLtJ_G0003273.1 mouse_genomes_project 16 36780766 36798260 - 4930565N06Rik antisense antisense MGP_NODShiLtJ_T0043378.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18369430 18391939 - MGP_NODShiLtJ_P0043378 Parl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043379.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18369430 18391981 - MGP_NODShiLtJ_P0043379 Parl protein_coding protein_coding MGP_NODShiLtJ_T0043380.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18369613 18372855 - Parl protein_coding retained_intron MGP_NODShiLtJ_T0043381.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18372354 18391934 - Parl protein_coding retained_intron MGP_NODShiLtJ_T0043382.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18375138 18377844 - Parl protein_coding retained_intron MGP_NODShiLtJ_T0043383.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18376533 18390923 - Parl protein_coding processed_transcript MGP_NODShiLtJ_T0043384.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18376559 18391948 - MGP_NODShiLtJ_P0043384 Parl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043385.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18382513 18387759 - Parl protein_coding retained_intron MGP_NODShiLtJ_T0043386.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18387190 18391407 - Parl protein_coding processed_transcript MGP_NODShiLtJ_T0043387.1 MGP_NODShiLtJ_G0022469.1 mouse_genomes_project 16 18387717 18391955 - Parl protein_coding retained_intron MGP_NODShiLtJ_T0010014.1 MGP_NODShiLtJ_G0008147.1 mouse_genomes_project 16 8014039 8014165 + Gm26268 miRNA miRNA MGP_NODShiLtJ_T0013075.1 MGP_NODShiLtJ_G0011183.1 mouse_genomes_project 16 89606950 89607380 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044451.1 MGP_NODShiLtJ_G0022732.1 mouse_genomes_project 16 62180639 62184212 - MGP_NODShiLtJ_P0044451 E330017A01Rik protein_coding protein_coding MGP_NODShiLtJ_T0013028.1 MGP_NODShiLtJ_G0011136.1 mouse_genomes_project 16 20548015 20548410 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017351.1 MGP_NODShiLtJ_G0015185.1 mouse_genomes_project 16 21639444 21695713 + B630019A10Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0044319.1 MGP_NODShiLtJ_G0022698.1 mouse_genomes_project 16 50622198 50649318 - protein_coding retained_intron MGP_NODShiLtJ_T0044320.1 MGP_NODShiLtJ_G0022698.1 mouse_genomes_project 16 50622198 50737772 - MGP_NODShiLtJ_P0044320 protein_coding protein_coding MGP_NODShiLtJ_T0044321.1 MGP_NODShiLtJ_G0022698.1 mouse_genomes_project 16 50622200 50649226 - protein_coding retained_intron MGP_NODShiLtJ_T0044322.1 MGP_NODShiLtJ_G0022698.1 mouse_genomes_project 16 50623845 50737548 - MGP_NODShiLtJ_P0044322 protein_coding protein_coding MGP_NODShiLtJ_T0044323.1 MGP_NODShiLtJ_G0022698.1 mouse_genomes_project 16 50624832 50638777 - MGP_NODShiLtJ_P0044323 protein_coding protein_coding MGP_NODShiLtJ_T0044324.1 MGP_NODShiLtJ_G0022698.1 mouse_genomes_project 16 50625052 50640323 - protein_coding retained_intron MGP_NODShiLtJ_T0010058.1 MGP_NODShiLtJ_G0008191.1 mouse_genomes_project 16 82371328 82371426 + Gm24272 miRNA miRNA MGP_NODShiLtJ_T0043095.1 MGP_NODShiLtJ_G0022402.1 mouse_genomes_project 16 14862202 14920513 - MGP_NODShiLtJ_P0043095 Ube2l3 protein_coding protein_coding MGP_NODShiLtJ_T0043096.1 MGP_NODShiLtJ_G0022402.1 mouse_genomes_project 16 14862204 14919356 - MGP_NODShiLtJ_P0043096 Ube2l3 protein_coding protein_coding MGP_NODShiLtJ_T0043097.1 MGP_NODShiLtJ_G0022402.1 mouse_genomes_project 16 14862507 14871346 - Ube2l3 protein_coding processed_transcript MGP_NODShiLtJ_T0043098.1 MGP_NODShiLtJ_G0022402.1 mouse_genomes_project 16 14863499 14919358 - MGP_NODShiLtJ_P0043098 Ube2l3 protein_coding protein_coding MGP_NODShiLtJ_T0043099.1 MGP_NODShiLtJ_G0022402.1 mouse_genomes_project 16 14868567 14919337 - Ube2l3 protein_coding retained_intron MGP_NODShiLtJ_T0043524.1 MGP_NODShiLtJ_G0022492.1 mouse_genomes_project 16 20170887 20217970 + MGP_NODShiLtJ_P0043524 Map3k13 protein_coding protein_coding MGP_NODShiLtJ_T0043794.1 MGP_NODShiLtJ_G0022569.1 mouse_genomes_project 16 31894466 31907850 - MGP_NODShiLtJ_P0043794 Slc51a protein_coding protein_coding MGP_NODShiLtJ_T0098958.1 MGP_NODShiLtJ_G0037352.1 mouse_genomes_project 16 36245428 36245532 + Gm22263 snRNA snRNA MGP_NODShiLtJ_T0100241.1 MGP_NODShiLtJ_G0038635.1 mouse_genomes_project 16 103130004 103130126 + Gm23406 snoRNA snoRNA MGP_NODShiLtJ_T0043782.1 MGP_NODShiLtJ_G0022563.1 mouse_genomes_project 16 31668795 31672120 + MGP_NODShiLtJ_P0043782 Smco1 protein_coding protein_coding MGP_NODShiLtJ_T0006769.1 MGP_NODShiLtJ_G0005574.1 mouse_genomes_project 16 14746348 14747940 + 1700056N10Rik lincRNA lincRNA MGP_NODShiLtJ_T0098931.1 MGP_NODShiLtJ_G0037325.1 mouse_genomes_project 16 5120699 5120803 + Gm26159 snRNA snRNA MGP_NODShiLtJ_T0042592.1 MGP_NODShiLtJ_G0022283.1 mouse_genomes_project 16 293988 301492 - Zfp597 protein_coding processed_transcript MGP_NODShiLtJ_T0042593.1 MGP_NODShiLtJ_G0022283.1 mouse_genomes_project 16 297195 310067 - MGP_NODShiLtJ_P0042593 Zfp597 protein_coding protein_coding MGP_NODShiLtJ_T0042594.1 MGP_NODShiLtJ_G0022283.1 mouse_genomes_project 16 298051 324762 - Zfp597 protein_coding processed_transcript MGP_NODShiLtJ_T0042595.1 MGP_NODShiLtJ_G0022283.1 mouse_genomes_project 16 300957 324818 - Zfp597 protein_coding processed_transcript MGP_NODShiLtJ_T0042596.1 MGP_NODShiLtJ_G0022283.1 mouse_genomes_project 16 302256 309404 - Zfp597 protein_coding retained_intron MGP_NODShiLtJ_T0044093.1 MGP_NODShiLtJ_G0022643.1 mouse_genomes_project 16 38604813 38634739 + MGP_NODShiLtJ_P0044093 Cd80 protein_coding protein_coding MGP_NODShiLtJ_T0043955.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35770835 35799021 + Kpna1 protein_coding retained_intron MGP_NODShiLtJ_T0043956.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35775119 35832667 + MGP_NODShiLtJ_P0043956 Kpna1 protein_coding protein_coding MGP_NODShiLtJ_T0043957.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35775129 35800801 + Kpna1 protein_coding retained_intron MGP_NODShiLtJ_T0043958.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35775158 35814168 + MGP_NODShiLtJ_P0043958 Kpna1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043959.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35775386 35807801 + MGP_NODShiLtJ_P0043959 Kpna1 protein_coding protein_coding MGP_NODShiLtJ_T0043960.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35795644 35829444 + MGP_NODShiLtJ_P0043960 Kpna1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043961.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35795710 35816534 + MGP_NODShiLtJ_P0043961 Kpna1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043962.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35808684 35830667 + MGP_NODShiLtJ_P0043962 Kpna1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043963.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35814267 35829404 + MGP_NODShiLtJ_P0043963 Kpna1 protein_coding protein_coding MGP_NODShiLtJ_T0043964.1 MGP_NODShiLtJ_G0022604.1 mouse_genomes_project 16 35816532 35827311 + Kpna1 protein_coding retained_intron MGP_NODShiLtJ_T0098957.1 MGP_NODShiLtJ_G0037351.1 mouse_genomes_project 16 36198751 36198856 + Gm24569 snRNA snRNA MGP_NODShiLtJ_T0013035.1 MGP_NODShiLtJ_G0011143.1 mouse_genomes_project 16 31298136 31299016 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044539.1 MGP_NODShiLtJ_G0022773.1 mouse_genomes_project 16 71066887 71093932 - MGP_NODShiLtJ_P0044539 Chmp2b protein_coding protein_coding MGP_NODShiLtJ_T0006796.1 MGP_NODShiLtJ_G0005598.1 mouse_genomes_project 16 52672716 52686860 - Dubr lincRNA lincRNA MGP_NODShiLtJ_T0006797.1 MGP_NODShiLtJ_G0005598.1 mouse_genomes_project 16 52672721 52686766 - Dubr lincRNA lincRNA MGP_NODShiLtJ_T0006798.1 MGP_NODShiLtJ_G0005598.1 mouse_genomes_project 16 52680832 52686820 - Dubr lincRNA lincRNA MGP_NODShiLtJ_T0006799.1 MGP_NODShiLtJ_G0005598.1 mouse_genomes_project 16 52681519 52686771 - Dubr lincRNA lincRNA MGP_NODShiLtJ_T0000938.1 MGP_NODShiLtJ_G0000866.1 mouse_genomes_project 16 61361727 61362137 + TEC TEC MGP_NODShiLtJ_T0042999.1 MGP_NODShiLtJ_G0022386.1 mouse_genomes_project 16 13785737 13799754 + MGP_NODShiLtJ_P0042999 Pkp2 protein_coding protein_coding MGP_NODShiLtJ_T0043000.1 MGP_NODShiLtJ_G0022386.1 mouse_genomes_project 16 13785737 13820766 + MGP_NODShiLtJ_P0043000 Pkp2 protein_coding protein_coding MGP_NODShiLtJ_T0043001.1 MGP_NODShiLtJ_G0022386.1 mouse_genomes_project 16 13785737 13844843 + MGP_NODShiLtJ_P0043001 Pkp2 protein_coding protein_coding MGP_NODShiLtJ_T0100210.1 MGP_NODShiLtJ_G0038604.1 mouse_genomes_project 16 35487608 35487756 - Gm25967 snoRNA snoRNA MGP_NODShiLtJ_T0003600.1 MGP_NODShiLtJ_G0003256.1 mouse_genomes_project 16 14793384 14798082 + Gm15585 antisense antisense MGP_NODShiLtJ_T0044540.1 MGP_NODShiLtJ_G0022774.1 mouse_genomes_project 16 71402052 71453733 + MGP_NODShiLtJ_P0044540 Vgll3 protein_coding protein_coding MGP_NODShiLtJ_T0044541.1 MGP_NODShiLtJ_G0022774.1 mouse_genomes_project 16 71402052 71451389 + MGP_NODShiLtJ_P0044541 Vgll3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0000956.1 MGP_NODShiLtJ_G0000883.1 mouse_genomes_project 16 108733902 108734751 + TEC TEC MGP_NODShiLtJ_T0006817.1 MGP_NODShiLtJ_G0005610.1 mouse_genomes_project 16 103264595 103266201 + Gm17518 lincRNA lincRNA MGP_NODShiLtJ_T0013014.1 MGP_NODShiLtJ_G0011122.1 mouse_genomes_project 16 14168899 14169319 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013064.1 MGP_NODShiLtJ_G0011172.1 mouse_genomes_project 16 64388500 64388903 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043679.1 MGP_NODShiLtJ_G0022539.1 mouse_genomes_project 16 29507796 29521997 - MGP_NODShiLtJ_P0043679 Lrrc15 protein_coding protein_coding MGP_NODShiLtJ_T0044298.1 MGP_NODShiLtJ_G0022687.1 mouse_genomes_project 16 47108588 47161473 - MGP_NODShiLtJ_P0044298 Plcxd2 protein_coding protein_coding MGP_NODShiLtJ_T0097965.1 MGP_NODShiLtJ_G0036377.1 mouse_genomes_project 16 50042388 50042507 - n-R5s36 rRNA rRNA MGP_NODShiLtJ_T0098980.1 MGP_NODShiLtJ_G0037374.1 mouse_genomes_project 16 103969297 103969380 - Gm24695 snRNA snRNA MGP_NODShiLtJ_T0006759.1 MGP_NODShiLtJ_G0005565.1 mouse_genomes_project 16 298051 324762 + Gm26675 lincRNA lincRNA MGP_NODShiLtJ_T0044671.1 MGP_NODShiLtJ_G0022813.1 mouse_genomes_project 16 100722557 100724913 - MGP_NODShiLtJ_P0044671 Cldn8 protein_coding protein_coding MGP_NODShiLtJ_T0044683.1 MGP_NODShiLtJ_G0022825.1 mouse_genomes_project 16 101048511 101057793 + MGP_NODShiLtJ_P0044683 Krtap15 protein_coding protein_coding MGP_NODShiLtJ_T0044685.1 MGP_NODShiLtJ_G0022825.1 mouse_genomes_project 16 101057302 101058153 + MGP_NODShiLtJ_P0044685 Krtap15 protein_coding protein_coding MGP_NODShiLtJ_T0043100.1 MGP_NODShiLtJ_G0022403.1 mouse_genomes_project 16 14930632 14936419 + MGP_NODShiLtJ_P0043100 Rimbp3 protein_coding protein_coding MGP_NODShiLtJ_T0010042.1 MGP_NODShiLtJ_G0008175.1 mouse_genomes_project 16 36648317 36648392 + Gm22617 miRNA miRNA MGP_NODShiLtJ_T0011300.1 MGP_NODShiLtJ_G0009433.1 mouse_genomes_project 16 41925370 41925533 - Gm27587 misc_RNA misc_RNA MGP_NODShiLtJ_T0043551.1 MGP_NODShiLtJ_G0022502.1 mouse_genomes_project 16 21240092 21254712 + MGP_NODShiLtJ_P0043551 Dnajb11 protein_coding protein_coding MGP_NODShiLtJ_T0043552.1 MGP_NODShiLtJ_G0022502.1 mouse_genomes_project 16 21240092 21254635 + MGP_NODShiLtJ_P0043552 Dnajb11 protein_coding protein_coding MGP_NODShiLtJ_T0043553.1 MGP_NODShiLtJ_G0022502.1 mouse_genomes_project 16 21240092 21261881 + MGP_NODShiLtJ_P0043553 Dnajb11 protein_coding protein_coding MGP_NODShiLtJ_T0043554.1 MGP_NODShiLtJ_G0022502.1 mouse_genomes_project 16 21240153 21254351 + Dnajb11 protein_coding processed_transcript MGP_NODShiLtJ_T0043555.1 MGP_NODShiLtJ_G0022502.1 mouse_genomes_project 16 21251673 21254553 + Dnajb11 protein_coding processed_transcript MGP_NODShiLtJ_T0043992.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36612326 36643540 - MGP_NODShiLtJ_P0043992 Slc15a2 protein_coding protein_coding MGP_NODShiLtJ_T0043993.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36613926 36643398 - MGP_NODShiLtJ_P0043993 Slc15a2 protein_coding protein_coding MGP_NODShiLtJ_T0043994.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36613926 36643370 - MGP_NODShiLtJ_P0043994 Slc15a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043995.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36614464 36616911 - Slc15a2 protein_coding retained_intron MGP_NODShiLtJ_T0043996.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36616610 36617560 - Slc15a2 protein_coding processed_transcript MGP_NODShiLtJ_T0043997.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36618050 36618857 - Slc15a2 protein_coding retained_intron MGP_NODShiLtJ_T0043998.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36619274 36624962 - Slc15a2 protein_coding retained_intron MGP_NODShiLtJ_T0043999.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36619321 36624772 - Slc15a2 protein_coding retained_intron MGP_NODShiLtJ_T0044000.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36623305 36624688 - Slc15a2 protein_coding retained_intron MGP_NODShiLtJ_T0044001.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36630404 36643518 - MGP_NODShiLtJ_P0044001 Slc15a2 protein_coding protein_coding MGP_NODShiLtJ_T0044002.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36630407 36643502 - MGP_NODShiLtJ_P0044002 Slc15a2 protein_coding protein_coding MGP_NODShiLtJ_T0044003.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36630601 36631809 - Slc15a2 protein_coding retained_intron MGP_NODShiLtJ_T0044004.1 MGP_NODShiLtJ_G0022619.1 mouse_genomes_project 16 36639963 36641043 - Slc15a2 protein_coding retained_intron MGP_NODShiLtJ_T0043248.1 MGP_NODShiLtJ_G0022434.1 mouse_genomes_project 16 16031811 16032955 + MGP_NODShiLtJ_P0043248 Ccdc188 protein_coding protein_coding MGP_NODShiLtJ_T0043742.1 MGP_NODShiLtJ_G0022553.1 mouse_genomes_project 16 31321268 31322713 - MGP_NODShiLtJ_P0043742 0610012G03Rik protein_coding protein_coding MGP_NODShiLtJ_T0013022.1 MGP_NODShiLtJ_G0011130.1 mouse_genomes_project 16 16938055 16938478 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044122.1 MGP_NODShiLtJ_G0022649.1 mouse_genomes_project 16 38934409 38963758 - MGP_NODShiLtJ_P0044122 Upk1b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010026.1 MGP_NODShiLtJ_G0008159.1 mouse_genomes_project 16 16105531 16105619 - Gm24572 miRNA miRNA MGP_NODShiLtJ_T0044691.1 MGP_NODShiLtJ_G0022831.1 mouse_genomes_project 16 101169160 101169328 - MGP_NODShiLtJ_P0044691 Krtap19-9a protein_coding protein_coding MGP_NODShiLtJ_T0044501.1 MGP_NODShiLtJ_G0022759.1 mouse_genomes_project 16 63227112 63261048 - Crybg3 protein_coding retained_intron MGP_NODShiLtJ_T0044502.1 MGP_NODShiLtJ_G0022759.1 mouse_genomes_project 16 63228425 63296110 - MGP_NODShiLtJ_P0044502 Crybg3 protein_coding protein_coding MGP_NODShiLtJ_T0044503.1 MGP_NODShiLtJ_G0022759.1 mouse_genomes_project 16 63261938 63275298 - Crybg3 protein_coding processed_transcript MGP_NODShiLtJ_T0044504.1 MGP_NODShiLtJ_G0022759.1 mouse_genomes_project 16 63279496 63294328 - MGP_NODShiLtJ_P0044504 Crybg3 protein_coding protein_coding MGP_NODShiLtJ_T0000037.1 MGP_NODShiLtJ_G0000030.1 mouse_genomes_project 16 16972290 16972328 - MGP_NODShiLtJ_P0000037 Iglj1 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0000928.1 MGP_NODShiLtJ_G0000857.1 mouse_genomes_project 16 350658 351026 - TEC TEC MGP_NODShiLtJ_T0000929.1 MGP_NODShiLtJ_G0000857.1 mouse_genomes_project 16 350690 351026 - TEC TEC MGP_NODShiLtJ_T0045051.1 MGP_NODShiLtJ_G0022913.1 mouse_genomes_project 16 109272165 109370444 + MGP_NODShiLtJ_P0045051 B3galt5 protein_coding protein_coding MGP_NODShiLtJ_T0045052.1 MGP_NODShiLtJ_G0022913.1 mouse_genomes_project 16 109318266 109364362 + B3galt5 protein_coding processed_transcript MGP_NODShiLtJ_T0045053.1 MGP_NODShiLtJ_G0022913.1 mouse_genomes_project 16 109318403 109364363 + B3galt5 protein_coding processed_transcript MGP_NODShiLtJ_T0045054.1 MGP_NODShiLtJ_G0022913.1 mouse_genomes_project 16 109325585 109370442 + MGP_NODShiLtJ_P0045054 B3galt5 protein_coding protein_coding MGP_NODShiLtJ_T0017349.1 MGP_NODShiLtJ_G0015183.1 mouse_genomes_project 16 18626962 18633427 - Gm16618 processed_transcript processed_transcript MGP_NODShiLtJ_T0098961.1 MGP_NODShiLtJ_G0037355.1 mouse_genomes_project 16 39093824 39093923 + Gm22500 snRNA snRNA MGP_NODShiLtJ_T0043211.1 MGP_NODShiLtJ_G0022421.1 mouse_genomes_project 16 15616069 15619158 - MGP_NODShiLtJ_P0043211 Car15 protein_coding protein_coding MGP_NODShiLtJ_T0100225.1 MGP_NODShiLtJ_G0038619.1 mouse_genomes_project 16 65297914 65297991 + Gm23852 snoRNA snoRNA MGP_NODShiLtJ_T0044154.1 MGP_NODShiLtJ_G0022655.1 mouse_genomes_project 16 44572685 44589638 - MGP_NODShiLtJ_P0044154 Tigit protein_coding protein_coding MGP_NODShiLtJ_T0100227.1 MGP_NODShiLtJ_G0038621.1 mouse_genomes_project 16 75046187 75046307 - Gm24681 snoRNA snoRNA MGP_NODShiLtJ_T0003607.1 MGP_NODShiLtJ_G0003263.1 mouse_genomes_project 16 30768042 30768458 - Gm15743 antisense antisense MGP_NODShiLtJ_T0003608.1 MGP_NODShiLtJ_G0003263.1 mouse_genomes_project 16 30768042 30769942 - Gm15743 antisense antisense MGP_NODShiLtJ_T0010057.1 MGP_NODShiLtJ_G0008190.1 mouse_genomes_project 16 67762984 67763052 + Gm25986 miRNA miRNA MGP_NODShiLtJ_T0044316.1 MGP_NODShiLtJ_G0022695.1 mouse_genomes_project 16 50485597 50487633 + MGP_NODShiLtJ_P0044316 Retnlb protein_coding protein_coding MGP_NODShiLtJ_T0042761.1 MGP_NODShiLtJ_G0022322.1 mouse_genomes_project 16 5194547 5213576 - MGP_NODShiLtJ_P0042761 Tmem114 protein_coding protein_coding MGP_NODShiLtJ_T0013077.1 MGP_NODShiLtJ_G0011185.1 mouse_genomes_project 16 99601373 99601763 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011307.1 MGP_NODShiLtJ_G0009440.1 mouse_genomes_project 16 106483335 106483616 + Gm22344 misc_RNA misc_RNA MGP_NODShiLtJ_T0043225.1 MGP_NODShiLtJ_G0022428.1 mouse_genomes_project 16 15708824 15711833 - MGP_NODShiLtJ_P0043225 Slc25a1 protein_coding protein_coding MGP_NODShiLtJ_T0043226.1 MGP_NODShiLtJ_G0022428.1 mouse_genomes_project 16 15709295 15710957 - Slc25a1 protein_coding retained_intron MGP_NODShiLtJ_T0043227.1 MGP_NODShiLtJ_G0022428.1 mouse_genomes_project 16 15709329 15711030 - MGP_NODShiLtJ_P0043227 Slc25a1 protein_coding protein_coding MGP_NODShiLtJ_T0043228.1 MGP_NODShiLtJ_G0022428.1 mouse_genomes_project 16 15709879 15711501 - Slc25a1 protein_coding retained_intron MGP_NODShiLtJ_T0043229.1 MGP_NODShiLtJ_G0022428.1 mouse_genomes_project 16 15710763 15711743 - Slc25a1 protein_coding retained_intron MGP_NODShiLtJ_T0043230.1 MGP_NODShiLtJ_G0022428.1 mouse_genomes_project 16 15711030 15711823 - Slc25a1 protein_coding retained_intron MGP_NODShiLtJ_T0013041.1 MGP_NODShiLtJ_G0011149.1 mouse_genomes_project 16 36637392 36638180 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013042.1 MGP_NODShiLtJ_G0011150.1 mouse_genomes_project 16 37169154 37170001 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044630.1 MGP_NODShiLtJ_G0022802.1 mouse_genomes_project 16 97457565 97466839 - MGP_NODShiLtJ_P0044630 Adamts1 protein_coding protein_coding MGP_NODShiLtJ_T0044631.1 MGP_NODShiLtJ_G0022802.1 mouse_genomes_project 16 97459208 97465205 - MGP_NODShiLtJ_P0044631 Adamts1 protein_coding protein_coding MGP_NODShiLtJ_T0044632.1 MGP_NODShiLtJ_G0022802.1 mouse_genomes_project 16 97461963 97463371 - Adamts1 protein_coding processed_transcript MGP_NODShiLtJ_T0042582.1 MGP_NODShiLtJ_G0022279.1 mouse_genomes_project 16 129126 142487 - MGP_NODShiLtJ_P0042582 Mefv protein_coding protein_coding MGP_NODShiLtJ_T0042583.1 MGP_NODShiLtJ_G0022279.1 mouse_genomes_project 16 129126 142487 - MGP_NODShiLtJ_P0042583 Mefv protein_coding protein_coding MGP_NODShiLtJ_T0006786.1 MGP_NODShiLtJ_G0005589.1 mouse_genomes_project 16 35234040 35241647 - 1600019K03Rik lincRNA lincRNA MGP_NODShiLtJ_T0013023.1 MGP_NODShiLtJ_G0011131.1 mouse_genomes_project 16 17753786 17754453 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042713.1 MGP_NODShiLtJ_G0022306.1 mouse_genomes_project 16 1423349 1478164 + MGP_NODShiLtJ_P0042713 Mgrn1 protein_coding protein_coding MGP_NODShiLtJ_T0042714.1 MGP_NODShiLtJ_G0022306.1 mouse_genomes_project 16 1423349 1478164 + MGP_NODShiLtJ_P0042714 Mgrn1 protein_coding protein_coding MGP_NODShiLtJ_T0042715.1 MGP_NODShiLtJ_G0022306.1 mouse_genomes_project 16 1423595 1478817 + MGP_NODShiLtJ_P0042715 Mgrn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043876.1 MGP_NODShiLtJ_G0022582.1 mouse_genomes_project 16 32737906 32807711 + MGP_NODShiLtJ_P0043876 Osbpl11 protein_coding protein_coding MGP_NODShiLtJ_T0044732.1 MGP_NODShiLtJ_G0022855.1 mouse_genomes_project 16 102887824 103026435 + MGP_NODShiLtJ_P0044732 Hunk protein_coding protein_coding MGP_NODShiLtJ_T0010056.1 MGP_NODShiLtJ_G0008189.1 mouse_genomes_project 16 64819700 64819813 - Gm27784 miRNA miRNA MGP_NODShiLtJ_T0006772.1 MGP_NODShiLtJ_G0005577.1 mouse_genomes_project 16 19467586 19521134 - lincRNA lincRNA MGP_NODShiLtJ_T0042590.1 MGP_NODShiLtJ_G0022281.1 mouse_genomes_project 16 274082 275021 + MGP_NODShiLtJ_P0042590 Olfr15 protein_coding protein_coding MGP_NODShiLtJ_T0044482.1 MGP_NODShiLtJ_G0022746.1 mouse_genomes_project 16 62659073 62659847 - MGP_NODShiLtJ_P0044482 protein_coding protein_coding MGP_NODShiLtJ_T0044424.1 MGP_NODShiLtJ_G0022726.1 mouse_genomes_project 16 60707355 61013502 - MGP_NODShiLtJ_P0044424 Cmss1 protein_coding protein_coding MGP_NODShiLtJ_T0011299.1 MGP_NODShiLtJ_G0009432.1 mouse_genomes_project 16 41622138 41622289 - Gm27717 misc_RNA misc_RNA MGP_NODShiLtJ_T0044091.1 MGP_NODShiLtJ_G0022641.1 mouse_genomes_project 16 38540773 38578283 - MGP_NODShiLtJ_P0044091 Pla1a protein_coding protein_coding MGP_NODShiLtJ_T0100202.1 MGP_NODShiLtJ_G0038596.1 mouse_genomes_project 16 21564999 21565128 + Gm26447 snoRNA snoRNA MGP_NODShiLtJ_T0101682.1 MGP_NODShiLtJ_G0039851.1 mouse_genomes_project 16 106441098 106445103 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000149.1 MGP_NODShiLtJ_G0000109.1 mouse_genomes_project 16 17174790 17175274 - MGP_NODShiLtJ_P0000149 Iglv3 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000930.1 MGP_NODShiLtJ_G0000858.1 mouse_genomes_project 16 639415 648017 - TEC TEC MGP_NODShiLtJ_T0044275.1 MGP_NODShiLtJ_G0022683.1 mouse_genomes_project 16 46783844 46825694 - MGP_NODShiLtJ_P0044275 Tmprss7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044276.1 MGP_NODShiLtJ_G0022683.1 mouse_genomes_project 16 46783851 46816924 - Tmprss7 protein_coding processed_transcript MGP_NODShiLtJ_T0044277.1 MGP_NODShiLtJ_G0022683.1 mouse_genomes_project 16 46783875 46821223 - Tmprss7 protein_coding processed_transcript MGP_NODShiLtJ_T0044278.1 MGP_NODShiLtJ_G0022683.1 mouse_genomes_project 16 46814938 46818042 - Tmprss7 protein_coding processed_transcript MGP_NODShiLtJ_T0044279.1 MGP_NODShiLtJ_G0022683.1 mouse_genomes_project 16 46815052 46818047 - Tmprss7 protein_coding retained_intron MGP_NODShiLtJ_T0044486.1 MGP_NODShiLtJ_G0022749.1 mouse_genomes_project 16 62816348 62817278 - MGP_NODShiLtJ_P0044486 Olfr196 protein_coding protein_coding MGP_NODShiLtJ_T0044051.1 MGP_NODShiLtJ_G0022628.1 mouse_genomes_project 16 37593420 37627422 + MGP_NODShiLtJ_P0044051 Rabl3 protein_coding protein_coding MGP_NODShiLtJ_T0044052.1 MGP_NODShiLtJ_G0022628.1 mouse_genomes_project 16 37593435 37627419 + MGP_NODShiLtJ_P0044052 Rabl3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044053.1 MGP_NODShiLtJ_G0022628.1 mouse_genomes_project 16 37593440 37619087 + Rabl3 protein_coding retained_intron MGP_NODShiLtJ_T0044054.1 MGP_NODShiLtJ_G0022628.1 mouse_genomes_project 16 37618772 37622978 + Rabl3 protein_coding retained_intron MGP_NODShiLtJ_T0006763.1 MGP_NODShiLtJ_G0005569.1 mouse_genomes_project 16 8060038 8068975 + Gm4262 lincRNA lincRNA MGP_NODShiLtJ_T0043600.1 MGP_NODShiLtJ_G0022512.1 mouse_genomes_project 16 21918324 21923152 + MGP_NODShiLtJ_P0043600 Rtp1 protein_coding protein_coding MGP_NODShiLtJ_T0000948.1 MGP_NODShiLtJ_G0000875.1 mouse_genomes_project 16 86669480 86670003 + TEC TEC MGP_NODShiLtJ_T0044707.1 MGP_NODShiLtJ_G0022845.1 mouse_genomes_project 16 101475732 101476197 + MGP_NODShiLtJ_P0044707 1110057P08Rik protein_coding protein_coding MGP_NODShiLtJ_T0100220.1 MGP_NODShiLtJ_G0038614.1 mouse_genomes_project 16 57260846 57260978 + Gm25853 snoRNA snoRNA MGP_NODShiLtJ_T0098963.1 MGP_NODShiLtJ_G0037357.1 mouse_genomes_project 16 43976410 43976517 + Gm25873 snRNA snRNA MGP_NODShiLtJ_T0012995.1 MGP_NODShiLtJ_G0011103.1 mouse_genomes_project 16 800084 800409 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013015.1 MGP_NODShiLtJ_G0011123.1 mouse_genomes_project 16 14531919 14532169 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043223.1 MGP_NODShiLtJ_G0022426.1 mouse_genomes_project 16 15682151 15692725 - MGP_NODShiLtJ_P0043223 Dgcr14 protein_coding protein_coding MGP_NODShiLtJ_T0098940.1 MGP_NODShiLtJ_G0037334.1 mouse_genomes_project 16 16186645 16186793 + Gm26170 snRNA snRNA MGP_NODShiLtJ_T0043893.1 MGP_NODShiLtJ_G0022588.1 mouse_genomes_project 16 33449224 33582798 + MGP_NODShiLtJ_P0043893 Itgb5 protein_coding protein_coding MGP_NODShiLtJ_T0043894.1 MGP_NODShiLtJ_G0022588.1 mouse_genomes_project 16 33449236 33582805 + MGP_NODShiLtJ_P0043894 Itgb5 protein_coding protein_coding MGP_NODShiLtJ_T0043895.1 MGP_NODShiLtJ_G0022588.1 mouse_genomes_project 16 33508088 33539751 + Itgb5 protein_coding processed_transcript MGP_NODShiLtJ_T0043896.1 MGP_NODShiLtJ_G0022588.1 mouse_genomes_project 16 33514981 33525025 + Itgb5 protein_coding processed_transcript MGP_NODShiLtJ_T0043897.1 MGP_NODShiLtJ_G0022588.1 mouse_genomes_project 16 33554817 33577800 + Itgb5 protein_coding processed_transcript MGP_NODShiLtJ_T0006781.1 MGP_NODShiLtJ_G0005584.1 mouse_genomes_project 16 29116386 29158966 - Gm26569 lincRNA lincRNA MGP_NODShiLtJ_T0044697.1 MGP_NODShiLtJ_G0022837.1 mouse_genomes_project 16 101317808 101318340 - MGP_NODShiLtJ_P0044697 Gm10228 protein_coding protein_coding MGP_NODShiLtJ_T0010040.1 MGP_NODShiLtJ_G0008173.1 mouse_genomes_project 16 32597849 32597938 + Gm22231 miRNA miRNA MGP_NODShiLtJ_T0043829.1 MGP_NODShiLtJ_G0022575.1 mouse_genomes_project 16 32257319 32267886 - MGP_NODShiLtJ_P0043829 Gm933 protein_coding protein_coding MGP_NODShiLtJ_T0044075.1 MGP_NODShiLtJ_G0022636.1 mouse_genomes_project 16 38374668 38432164 - MGP_NODShiLtJ_P0044075 Nr1i2 protein_coding protein_coding MGP_NODShiLtJ_T0010045.1 MGP_NODShiLtJ_G0008178.1 mouse_genomes_project 16 43044156 43044264 - Mir6540 miRNA miRNA MGP_NODShiLtJ_T0043309.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345050 16416454 + MGP_NODShiLtJ_P0043309 Gnb1l protein_coding protein_coding MGP_NODShiLtJ_T0043310.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345105 16402154 + MGP_NODShiLtJ_P0043310 Gnb1l protein_coding protein_coding MGP_NODShiLtJ_T0043311.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345160 16402338 + Gnb1l protein_coding processed_transcript MGP_NODShiLtJ_T0043312.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345168 16402204 + MGP_NODShiLtJ_P0043312 Gnb1l protein_coding protein_coding MGP_NODShiLtJ_T0043313.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345168 16416402 + MGP_NODShiLtJ_P0043313 Gnb1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043314.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345170 16416454 + MGP_NODShiLtJ_P0043314 Gnb1l protein_coding protein_coding MGP_NODShiLtJ_T0043315.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345170 16416454 + MGP_NODShiLtJ_P0043315 Gnb1l protein_coding protein_coding MGP_NODShiLtJ_T0043316.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345173 16402277 + Gnb1l protein_coding processed_transcript MGP_NODShiLtJ_T0043317.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345179 16393991 + MGP_NODShiLtJ_P0043317 Gnb1l protein_coding protein_coding MGP_NODShiLtJ_T0043319.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16345184 16414313 + MGP_NODShiLtJ_P0043319 Gnb1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043320.1 MGP_NODShiLtJ_G0022443.1 mouse_genomes_project 16 16398508 16402350 + Gnb1l protein_coding processed_transcript MGP_NODShiLtJ_T0044608.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96402102 96408481 - MGP_NODShiLtJ_P0044608 Atp5j protein_coding protein_coding MGP_NODShiLtJ_T0044609.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96402107 96403050 - Atp5j protein_coding retained_intron MGP_NODShiLtJ_T0044610.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96402107 96409745 - MGP_NODShiLtJ_P0044610 Atp5j protein_coding protein_coding MGP_NODShiLtJ_T0044611.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96402107 96409867 - MGP_NODShiLtJ_P0044611 Atp5j protein_coding protein_coding MGP_NODShiLtJ_T0044612.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96402110 96405849 - Atp5j protein_coding retained_intron MGP_NODShiLtJ_T0044613.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96402675 96409844 - MGP_NODShiLtJ_P0044613 Atp5j protein_coding protein_coding MGP_NODShiLtJ_T0044614.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96403789 96408118 - Atp5j protein_coding processed_transcript MGP_NODShiLtJ_T0044615.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96405312 96409540 - Atp5j protein_coding retained_intron MGP_NODShiLtJ_T0044616.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96405570 96409397 - Atp5j protein_coding processed_transcript MGP_NODShiLtJ_T0044617.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96405610 96409247 - Atp5j protein_coding processed_transcript MGP_NODShiLtJ_T0044618.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96407764 96409074 - Atp5j protein_coding retained_intron MGP_NODShiLtJ_T0044619.1 MGP_NODShiLtJ_G0022798.1 mouse_genomes_project 16 96408517 96409771 - Atp5j protein_coding retained_intron MGP_NODShiLtJ_T0044418.1 MGP_NODShiLtJ_G0022723.1 mouse_genomes_project 16 60558034 60570101 - MGP_NODShiLtJ_P0044418 Nit2 protein_coding protein_coding MGP_NODShiLtJ_T0044533.1 MGP_NODShiLtJ_G0022771.1 mouse_genomes_project 16 70392407 70578421 - MGP_NODShiLtJ_P0044533 Htr1f protein_coding protein_coding MGP_NODShiLtJ_T0044983.1 MGP_NODShiLtJ_G0022903.1 mouse_genomes_project 16 107656107 107927196 - MGP_NODShiLtJ_P0044983 Kcnj6 protein_coding protein_coding MGP_NODShiLtJ_T0044984.1 MGP_NODShiLtJ_G0022903.1 mouse_genomes_project 16 107671118 107927196 - MGP_NODShiLtJ_P0044984 Kcnj6 protein_coding protein_coding MGP_NODShiLtJ_T0044985.1 MGP_NODShiLtJ_G0022903.1 mouse_genomes_project 16 107736322 107770184 - MGP_NODShiLtJ_P0044985 Kcnj6 protein_coding protein_coding MGP_NODShiLtJ_T0042974.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11743287 11860160 + MGP_NODShiLtJ_P0042974 Abcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042975.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11743287 11860160 + MGP_NODShiLtJ_P0042975 Abcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042976.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11743287 11860160 + MGP_NODShiLtJ_P0042976 Abcc1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042977.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11743289 11861995 + MGP_NODShiLtJ_P0042977 Abcc1 protein_coding protein_coding MGP_NODShiLtJ_T0042978.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11743305 11781687 + MGP_NODShiLtJ_P0042978 Abcc1 protein_coding protein_coding MGP_NODShiLtJ_T0042979.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11743310 11790284 + MGP_NODShiLtJ_P0042979 Abcc1 protein_coding protein_coding MGP_NODShiLtJ_T0042980.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11747487 11776725 + MGP_NODShiLtJ_P0042980 Abcc1 protein_coding protein_coding MGP_NODShiLtJ_T0042981.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11779234 11779609 + Abcc1 protein_coding processed_transcript MGP_NODShiLtJ_T0042982.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11787582 11806203 + Abcc1 protein_coding retained_intron MGP_NODShiLtJ_T0042983.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11847277 11854494 + Abcc1 protein_coding retained_intron MGP_NODShiLtJ_T0042984.1 MGP_NODShiLtJ_G0022376.1 mouse_genomes_project 16 11847282 11860300 + Abcc1 protein_coding retained_intron MGP_NODShiLtJ_T0097775.1 MGP_NODShiLtJ_G0036187.1 mouse_genomes_project 16 100960146 100960776 + pseudogene pseudogene MGP_NODShiLtJ_T0043766.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31537754 31560313 - MGP_NODShiLtJ_P0043766 Nrros protein_coding protein_coding MGP_NODShiLtJ_T0043767.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31537764 31560285 - MGP_NODShiLtJ_P0043767 Nrros protein_coding protein_coding MGP_NODShiLtJ_T0043768.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31537764 31542844 - MGP_NODShiLtJ_P0043768 Nrros protein_coding protein_coding MGP_NODShiLtJ_T0043769.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31537794 31560204 - MGP_NODShiLtJ_P0043769 Nrros protein_coding protein_coding MGP_NODShiLtJ_T0043770.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31537794 31560222 - MGP_NODShiLtJ_P0043770 Nrros protein_coding protein_coding MGP_NODShiLtJ_T0043771.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31539651 31560322 - MGP_NODShiLtJ_P0043771 Nrros protein_coding protein_coding MGP_NODShiLtJ_T0043772.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31539784 31560204 - Nrros protein_coding processed_transcript MGP_NODShiLtJ_T0043773.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31539796 31543037 - Nrros protein_coding processed_transcript MGP_NODShiLtJ_T0043774.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31539843 31560210 - MGP_NODShiLtJ_P0043774 Nrros protein_coding protein_coding MGP_NODShiLtJ_T0043775.1 MGP_NODShiLtJ_G0022559.1 mouse_genomes_project 16 31542514 31560185 - Nrros protein_coding processed_transcript MGP_NODShiLtJ_T0042995.1 MGP_NODShiLtJ_G0022384.1 mouse_genomes_project 16 13372765 13389641 - MGP_NODShiLtJ_P0042995 Mzt2 protein_coding protein_coding MGP_NODShiLtJ_T0042996.1 MGP_NODShiLtJ_G0022384.1 mouse_genomes_project 16 13372767 13389016 - Mzt2 protein_coding retained_intron MGP_NODShiLtJ_T0042997.1 MGP_NODShiLtJ_G0022384.1 mouse_genomes_project 16 13372774 13389663 - MGP_NODShiLtJ_P0042997 Mzt2 protein_coding protein_coding MGP_NODShiLtJ_T0101680.1 MGP_NODShiLtJ_G0039849.1 mouse_genomes_project 16 62639305 62640198 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0043650.1 MGP_NODShiLtJ_G0022533.1 mouse_genomes_project 16 28409242 28559507 - MGP_NODShiLtJ_P0043650 Atp13a5 protein_coding protein_coding MGP_NODShiLtJ_T0043651.1 MGP_NODShiLtJ_G0022533.1 mouse_genomes_project 16 28409305 28559481 - MGP_NODShiLtJ_P0043651 Atp13a5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043652.1 MGP_NODShiLtJ_G0022533.1 mouse_genomes_project 16 28409851 28559442 - MGP_NODShiLtJ_P0043652 Atp13a5 protein_coding protein_coding MGP_NODShiLtJ_T0043653.1 MGP_NODShiLtJ_G0022533.1 mouse_genomes_project 16 28508842 28559358 - MGP_NODShiLtJ_P0043653 Atp13a5 protein_coding protein_coding MGP_NODShiLtJ_T0043601.1 MGP_NODShiLtJ_G0022513.1 mouse_genomes_project 16 21942270 22012964 - MGP_NODShiLtJ_P0043601 Masp1 protein_coding protein_coding MGP_NODShiLtJ_T0043602.1 MGP_NODShiLtJ_G0022513.1 mouse_genomes_project 16 21972544 22012924 - MGP_NODShiLtJ_P0043602 Masp1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003594.1 MGP_NODShiLtJ_G0003251.1 mouse_genomes_project 16 7695856 7709995 - Gm15558 antisense antisense MGP_NODShiLtJ_T0003625.1 MGP_NODShiLtJ_G0003276.1 mouse_genomes_project 16 39000400 39000737 + antisense antisense MGP_NODShiLtJ_T0000016.1 MGP_NODShiLtJ_G0000011.1 mouse_genomes_project 16 16974295 16974747 - MGP_NODShiLtJ_P0000016 Iglc3 IG_C_gene IG_C_gene MGP_NODShiLtJ_T0043053.1 MGP_NODShiLtJ_G0022394.1 mouse_genomes_project 16 14582178 14614130 + MGP_NODShiLtJ_P0043053 Ppm1f protein_coding protein_coding MGP_NODShiLtJ_T0043054.1 MGP_NODShiLtJ_G0022394.1 mouse_genomes_project 16 14582283 14600908 + Ppm1f protein_coding processed_transcript MGP_NODShiLtJ_T0043353.1 MGP_NODShiLtJ_G0022455.1 mouse_genomes_project 16 17232309 17233404 - MGP_NODShiLtJ_P0043353 Olfr164 protein_coding protein_coding MGP_NODShiLtJ_T0042740.1 MGP_NODShiLtJ_G0022314.1 mouse_genomes_project 16 1596124 1641415 + MGP_NODShiLtJ_P0042740 Ubn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043082.1 MGP_NODShiLtJ_G0022398.1 mouse_genomes_project 16 14817634 14830323 - MGP_NODShiLtJ_P0043082 2610318N02Rik protein_coding protein_coding MGP_NODShiLtJ_T0044070.1 MGP_NODShiLtJ_G0022634.1 mouse_genomes_project 16 38023640 38123194 + MGP_NODShiLtJ_P0044070 Gpr156 protein_coding protein_coding MGP_NODShiLtJ_T0000951.1 MGP_NODShiLtJ_G0000878.1 mouse_genomes_project 16 86908057 86911831 + TEC TEC MGP_NODShiLtJ_T0000038.1 MGP_NODShiLtJ_G0000031.1 mouse_genomes_project 16 16975436 16975474 - MGP_NODShiLtJ_P0000038 Iglj3p IG_J_gene IG_J_gene MGP_NODShiLtJ_T0043927.1 MGP_NODShiLtJ_G0022596.1 mouse_genomes_project 16 35028217 35083767 - MGP_NODShiLtJ_P0043927 Sec22a protein_coding protein_coding MGP_NODShiLtJ_T0043928.1 MGP_NODShiLtJ_G0022596.1 mouse_genomes_project 16 35031156 35067305 - Sec22a protein_coding processed_transcript MGP_NODShiLtJ_T0043929.1 MGP_NODShiLtJ_G0022596.1 mouse_genomes_project 16 35068475 35083664 - Sec22a protein_coding retained_intron MGP_NODShiLtJ_T0043930.1 MGP_NODShiLtJ_G0022596.1 mouse_genomes_project 16 35080521 35083701 - Sec22a protein_coding retained_intron MGP_NODShiLtJ_T0043931.1 MGP_NODShiLtJ_G0022596.1 mouse_genomes_project 16 35080893 35083696 - Sec22a protein_coding processed_transcript MGP_NODShiLtJ_T0042845.1 MGP_NODShiLtJ_G0022346.1 mouse_genomes_project 16 7831121 7831682 - MGP_NODShiLtJ_P0042845 Prm1 protein_coding protein_coding MGP_NODShiLtJ_T0003601.1 MGP_NODShiLtJ_G0003257.1 mouse_genomes_project 16 14849533 14850342 + Gm15646 antisense antisense MGP_NODShiLtJ_T0044136.1 MGP_NODShiLtJ_G0022653.1 mouse_genomes_project 16 42988021 43083871 - MGP_NODShiLtJ_P0044136 Gap43 protein_coding protein_coding MGP_NODShiLtJ_T0044137.1 MGP_NODShiLtJ_G0022653.1 mouse_genomes_project 16 42988037 43016736 - Gap43 protein_coding processed_transcript MGP_NODShiLtJ_T0006784.1 MGP_NODShiLtJ_G0005587.1 mouse_genomes_project 16 29434954 29439925 - Gm26562 lincRNA lincRNA MGP_NODShiLtJ_T0044509.1 MGP_NODShiLtJ_G0022761.1 mouse_genomes_project 16 63398265 64673721 - MGP_NODShiLtJ_P0044509 Epha6 protein_coding protein_coding MGP_NODShiLtJ_T0044510.1 MGP_NODShiLtJ_G0022761.1 mouse_genomes_project 16 63415599 63923871 - MGP_NODShiLtJ_P0044510 Epha6 protein_coding protein_coding MGP_NODShiLtJ_T0044511.1 MGP_NODShiLtJ_G0022761.1 mouse_genomes_project 16 64423498 64674004 - Epha6 protein_coding retained_intron MGP_NODShiLtJ_T0044512.1 MGP_NODShiLtJ_G0022761.1 mouse_genomes_project 16 64522739 64673692 - Epha6 protein_coding processed_transcript MGP_NODShiLtJ_T0044350.1 MGP_NODShiLtJ_G0022705.1 mouse_genomes_project 16 54194024 54392793 + MGP_NODShiLtJ_P0044350 Cblb protein_coding protein_coding MGP_NODShiLtJ_T0044351.1 MGP_NODShiLtJ_G0022705.1 mouse_genomes_project 16 54194139 54392800 + MGP_NODShiLtJ_P0044351 Cblb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043716.1 MGP_NODShiLtJ_G0022549.1 mouse_genomes_project 16 30759421 30799788 + MGP_NODShiLtJ_P0043716 Bdh1 protein_coding protein_coding MGP_NODShiLtJ_T0043717.1 MGP_NODShiLtJ_G0022549.1 mouse_genomes_project 16 30768913 30801198 + MGP_NODShiLtJ_P0043717 Bdh1 protein_coding protein_coding MGP_NODShiLtJ_T0043718.1 MGP_NODShiLtJ_G0022549.1 mouse_genomes_project 16 30768917 30779820 + Bdh1 protein_coding retained_intron MGP_NODShiLtJ_T0043719.1 MGP_NODShiLtJ_G0022549.1 mouse_genomes_project 16 30769464 30799515 + MGP_NODShiLtJ_P0043719 Bdh1 protein_coding protein_coding MGP_NODShiLtJ_T0043720.1 MGP_NODShiLtJ_G0022549.1 mouse_genomes_project 16 30776042 30799043 + MGP_NODShiLtJ_P0043720 Bdh1 protein_coding protein_coding MGP_NODShiLtJ_T0043721.1 MGP_NODShiLtJ_G0022549.1 mouse_genomes_project 16 30800412 30801198 + Bdh1 protein_coding processed_transcript MGP_NODShiLtJ_T0097774.1 MGP_NODShiLtJ_G0036186.1 mouse_genomes_project 16 62837577 62838503 - pseudogene pseudogene MGP_NODShiLtJ_T0043020.1 MGP_NODShiLtJ_G0022390.1 mouse_genomes_project 16 14316781 14317923 - MGP_NODShiLtJ_P0043020 Olfr19 protein_coding protein_coding MGP_NODShiLtJ_T0043021.1 MGP_NODShiLtJ_G0022390.1 mouse_genomes_project 16 14317240 14320311 - MGP_NODShiLtJ_P0043021 Olfr19 protein_coding protein_coding MGP_NODShiLtJ_T0045055.1 MGP_NODShiLtJ_G0022914.1 mouse_genomes_project 16 109414332 109475442 + MGP_NODShiLtJ_P0045055 Igsf5 protein_coding protein_coding MGP_NODShiLtJ_T0045056.1 MGP_NODShiLtJ_G0022914.1 mouse_genomes_project 16 109414458 109459101 + MGP_NODShiLtJ_P0045056 Igsf5 protein_coding protein_coding MGP_NODShiLtJ_T0045057.1 MGP_NODShiLtJ_G0022914.1 mouse_genomes_project 16 109414458 109459104 + MGP_NODShiLtJ_P0045057 Igsf5 protein_coding protein_coding MGP_NODShiLtJ_T0045058.1 MGP_NODShiLtJ_G0022914.1 mouse_genomes_project 16 109414458 109586618 + MGP_NODShiLtJ_P0045058 Igsf5 protein_coding protein_coding MGP_NODShiLtJ_T0045059.1 MGP_NODShiLtJ_G0022914.1 mouse_genomes_project 16 109442342 109458401 + Igsf5 protein_coding processed_transcript MGP_NODShiLtJ_T0045060.1 MGP_NODShiLtJ_G0022914.1 mouse_genomes_project 16 109451446 109475275 + MGP_NODShiLtJ_P0045060 Igsf5 protein_coding protein_coding MGP_NODShiLtJ_T0013059.1 MGP_NODShiLtJ_G0011167.1 mouse_genomes_project 16 51101377 51102595 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011303.1 MGP_NODShiLtJ_G0009436.1 mouse_genomes_project 16 71558877 71559190 + Gm22217 misc_RNA misc_RNA MGP_NODShiLtJ_T0043944.1 MGP_NODShiLtJ_G0022601.1 mouse_genomes_project 16 35604169 35650800 - MGP_NODShiLtJ_P0043944 Parp14 protein_coding protein_coding MGP_NODShiLtJ_T0043945.1 MGP_NODShiLtJ_G0022601.1 mouse_genomes_project 16 35633909 35650645 - Parp14 protein_coding retained_intron MGP_NODShiLtJ_T0043946.1 MGP_NODShiLtJ_G0022601.1 mouse_genomes_project 16 35645188 35650645 - Parp14 protein_coding retained_intron MGP_NODShiLtJ_T0010028.1 MGP_NODShiLtJ_G0008161.1 mouse_genomes_project 16 16195450 16195521 - Gm26219 miRNA miRNA MGP_NODShiLtJ_T0044272.1 MGP_NODShiLtJ_G0022681.1 mouse_genomes_project 16 46736467 46748326 + MGP_NODShiLtJ_P0044272 Gcsam protein_coding protein_coding MGP_NODShiLtJ_T0044273.1 MGP_NODShiLtJ_G0022681.1 mouse_genomes_project 16 46736510 46749950 + MGP_NODShiLtJ_P0044273 Gcsam protein_coding protein_coding MGP_NODShiLtJ_T0044244.1 MGP_NODShiLtJ_G0022675.1 mouse_genomes_project 16 46220261 46240671 - MGP_NODShiLtJ_P0044244 Slc35a5 protein_coding protein_coding MGP_NODShiLtJ_T0044245.1 MGP_NODShiLtJ_G0022675.1 mouse_genomes_project 16 46223696 46240531 - MGP_NODShiLtJ_P0044245 Slc35a5 protein_coding protein_coding MGP_NODShiLtJ_T0044246.1 MGP_NODShiLtJ_G0022675.1 mouse_genomes_project 16 46225764 46233672 - Slc35a5 protein_coding retained_intron MGP_NODShiLtJ_T0044247.1 MGP_NODShiLtJ_G0022675.1 mouse_genomes_project 16 46225907 46240609 - MGP_NODShiLtJ_P0044247 Slc35a5 protein_coding protein_coding MGP_NODShiLtJ_T0044248.1 MGP_NODShiLtJ_G0022675.1 mouse_genomes_project 16 46225927 46240148 - MGP_NODShiLtJ_P0044248 Slc35a5 protein_coding protein_coding MGP_NODShiLtJ_T0044249.1 MGP_NODShiLtJ_G0022675.1 mouse_genomes_project 16 46234312 46240620 - Slc35a5 protein_coding retained_intron MGP_NODShiLtJ_T0044250.1 MGP_NODShiLtJ_G0022675.1 mouse_genomes_project 16 46234355 46240418 - MGP_NODShiLtJ_P0044250 Slc35a5 protein_coding protein_coding MGP_NODShiLtJ_T0044251.1 MGP_NODShiLtJ_G0022675.1 mouse_genomes_project 16 46236440 46240565 - Slc35a5 protein_coding retained_intron MGP_NODShiLtJ_T0042970.1 MGP_NODShiLtJ_G0022374.1 mouse_genomes_project 16 11560746 11664211 - MGP_NODShiLtJ_P0042970 Myh11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042971.1 MGP_NODShiLtJ_G0022374.1 mouse_genomes_project 16 11560747 11664259 - MGP_NODShiLtJ_P0042971 Myh11 protein_coding protein_coding MGP_NODShiLtJ_T0044700.1 MGP_NODShiLtJ_G0022840.1 mouse_genomes_project 16 101376835 101377355 + MGP_NODShiLtJ_P0044700 Krtap6-3 protein_coding protein_coding MGP_NODShiLtJ_T0044701.1 MGP_NODShiLtJ_G0022840.1 mouse_genomes_project 16 101376911 101377355 + MGP_NODShiLtJ_P0044701 Krtap6-3 protein_coding protein_coding MGP_NODShiLtJ_T0013071.1 MGP_NODShiLtJ_G0011179.1 mouse_genomes_project 16 84639897 84640410 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044592.1 MGP_NODShiLtJ_G0022791.1 mouse_genomes_project 16 87738592 87757057 - MGP_NODShiLtJ_P0044592 protein_coding protein_coding MGP_NODShiLtJ_T0044333.1 MGP_NODShiLtJ_G0022701.1 mouse_genomes_project 16 51544666 51610596 + MGP_NODShiLtJ_P0044333 Ift57 protein_coding protein_coding MGP_NODShiLtJ_T0044334.1 MGP_NODShiLtJ_G0022701.1 mouse_genomes_project 16 51544737 51608098 + MGP_NODShiLtJ_P0044334 Ift57 protein_coding protein_coding MGP_NODShiLtJ_T0044335.1 MGP_NODShiLtJ_G0022701.1 mouse_genomes_project 16 51544788 51558710 + Ift57 protein_coding processed_transcript MGP_NODShiLtJ_T0044336.1 MGP_NODShiLtJ_G0022701.1 mouse_genomes_project 16 51557764 51609586 + MGP_NODShiLtJ_P0044336 Ift57 protein_coding protein_coding MGP_NODShiLtJ_T0043354.1 MGP_NODShiLtJ_G0022456.1 mouse_genomes_project 16 17361391 17362431 - MGP_NODShiLtJ_P0043354 Olfr165 protein_coding protein_coding MGP_NODShiLtJ_T0043356.1 MGP_NODShiLtJ_G0022456.1 mouse_genomes_project 16 17361987 17378226 - MGP_NODShiLtJ_P0043356 Olfr165 protein_coding protein_coding MGP_NODShiLtJ_T0042798.1 MGP_NODShiLtJ_G0022331.1 mouse_genomes_project 16 5667776 5698499 + MGP_NODShiLtJ_P0042798 1810013L24Rik protein_coding protein_coding MGP_NODShiLtJ_T0006820.1 MGP_NODShiLtJ_G0005612.1 mouse_genomes_project 16 106199871 106238806 - 1700029J03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006821.1 MGP_NODShiLtJ_G0005612.1 mouse_genomes_project 16 106204934 106272880 - 1700029J03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006800.1 MGP_NODShiLtJ_G0005599.1 mouse_genomes_project 16 52739253 52740687 + lincRNA lincRNA MGP_NODShiLtJ_T0006801.1 MGP_NODShiLtJ_G0005599.1 mouse_genomes_project 16 52739322 52740661 + lincRNA lincRNA MGP_NODShiLtJ_T0098965.1 MGP_NODShiLtJ_G0037359.1 mouse_genomes_project 16 48931790 48931897 - Gm24651 snRNA snRNA MGP_NODShiLtJ_T0101674.1 MGP_NODShiLtJ_G0039843.1 mouse_genomes_project 16 11261096 11263069 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098962.1 MGP_NODShiLtJ_G0037356.1 mouse_genomes_project 16 40771159 40771253 + Gm22543 snRNA snRNA MGP_NODShiLtJ_T0043232.1 MGP_NODShiLtJ_G0022430.1 mouse_genomes_project 16 15773601 15774319 + MGP_NODShiLtJ_P0043232 Vpreb2 protein_coding protein_coding MGP_NODShiLtJ_T0097961.1 MGP_NODShiLtJ_G0036373.1 mouse_genomes_project 16 29370722 29370825 - n-R5s32 rRNA rRNA MGP_NODShiLtJ_T0013069.1 MGP_NODShiLtJ_G0011177.1 mouse_genomes_project 16 73796493 73797015 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010018.1 MGP_NODShiLtJ_G0008151.1 mouse_genomes_project 16 10727951 10728052 - Mir6365 miRNA miRNA MGP_NODShiLtJ_T0101433.1 MGP_NODShiLtJ_G0039622.1 mouse_genomes_project 16 18594120 18607162 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0044049.1 MGP_NODShiLtJ_G0022627.1 mouse_genomes_project 16 37563309 37593325 - MGP_NODShiLtJ_P0044049 Gtf2e1 protein_coding protein_coding MGP_NODShiLtJ_T0044050.1 MGP_NODShiLtJ_G0022627.1 mouse_genomes_project 16 37586055 37593312 - Gtf2e1 protein_coding retained_intron MGP_NODShiLtJ_T0013004.1 MGP_NODShiLtJ_G0011112.1 mouse_genomes_project 16 8260374 8261386 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043499.1 MGP_NODShiLtJ_G0022485.1 mouse_genomes_project 16 18849460 18855037 - MGP_NODShiLtJ_P0043499 Thpo protein_coding protein_coding MGP_NODShiLtJ_T0044523.1 MGP_NODShiLtJ_G0022765.1 mouse_genomes_project 16 67813813 67895434 + MGP_NODShiLtJ_P0044523 Pros1 protein_coding protein_coding MGP_NODShiLtJ_T0044524.1 MGP_NODShiLtJ_G0022765.1 mouse_genomes_project 16 67862696 67864957 + Pros1 protein_coding retained_intron MGP_NODShiLtJ_T0044525.1 MGP_NODShiLtJ_G0022765.1 mouse_genomes_project 16 67887439 67894478 + Pros1 protein_coding processed_transcript MGP_NODShiLtJ_T0000018.1 MGP_NODShiLtJ_G0000013.1 mouse_genomes_project 16 17127337 17127795 - MGP_NODShiLtJ_P0000018 Iglc2 IG_C_gene IG_C_gene MGP_NODShiLtJ_T0000019.1 MGP_NODShiLtJ_G0000013.1 mouse_genomes_project 16 17127342 17129293 - MGP_NODShiLtJ_P0000019 Iglc2 IG_C_gene IG_C_gene MGP_NODShiLtJ_T0044542.1 MGP_NODShiLtJ_G0022775.1 mouse_genomes_project 16 72455900 73833403 - MGP_NODShiLtJ_P0044542 Cadm2 protein_coding protein_coding MGP_NODShiLtJ_T0044543.1 MGP_NODShiLtJ_G0022775.1 mouse_genomes_project 16 72455900 73833488 - MGP_NODShiLtJ_P0044543 Cadm2 protein_coding protein_coding MGP_NODShiLtJ_T0044544.1 MGP_NODShiLtJ_G0022775.1 mouse_genomes_project 16 72456676 72891735 - MGP_NODShiLtJ_P0044544 Cadm2 protein_coding protein_coding MGP_NODShiLtJ_T0044545.1 MGP_NODShiLtJ_G0022775.1 mouse_genomes_project 16 72648983 73833073 - MGP_NODShiLtJ_P0044545 Cadm2 protein_coding protein_coding MGP_NODShiLtJ_T0044546.1 MGP_NODShiLtJ_G0022775.1 mouse_genomes_project 16 72684248 72827213 - Cadm2 protein_coding processed_transcript MGP_NODShiLtJ_T0042671.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1141000 1194699 - MGP_NODShiLtJ_P0042671 Coro7 protein_coding protein_coding MGP_NODShiLtJ_T0042672.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1142244 1143740 - Coro7 protein_coding processed_transcript MGP_NODShiLtJ_T0042673.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1143620 1144535 - Coro7 protein_coding retained_intron MGP_NODShiLtJ_T0042674.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1143927 1194600 - MGP_NODShiLtJ_P0042674 Coro7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042675.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1146746 1148728 - Coro7 protein_coding retained_intron MGP_NODShiLtJ_T0042676.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1147114 1149904 - Coro7 protein_coding retained_intron MGP_NODShiLtJ_T0042677.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1148145 1161585 - Coro7 protein_coding processed_transcript MGP_NODShiLtJ_T0042678.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1148192 1149910 - Coro7 protein_coding retained_intron MGP_NODShiLtJ_T0042679.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1149466 1177088 - Coro7 protein_coding retained_intron MGP_NODShiLtJ_T0042683.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1167434 1194699 - MGP_NODShiLtJ_P0042683 Coro7 protein_coding protein_coding MGP_NODShiLtJ_T0042684.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1175467 1194635 - Coro7 protein_coding retained_intron MGP_NODShiLtJ_T0042685.1 MGP_NODShiLtJ_G0022298.1 mouse_genomes_project 16 1190450 1194664 - Coro7 protein_coding retained_intron MGP_NODShiLtJ_T0006805.1 MGP_NODShiLtJ_G0005603.1 mouse_genomes_project 16 63199226 63205378 - 1700022E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0006806.1 MGP_NODShiLtJ_G0005603.1 mouse_genomes_project 16 63203177 63205412 - 1700022E09Rik lincRNA lincRNA MGP_NODShiLtJ_T0044311.1 MGP_NODShiLtJ_G0022691.1 mouse_genomes_project 16 49893719 49906627 + MGP_NODShiLtJ_P0044311 Dppa4 protein_coding protein_coding MGP_NODShiLtJ_T0044312.1 MGP_NODShiLtJ_G0022691.1 mouse_genomes_project 16 49893719 49906627 + MGP_NODShiLtJ_P0044312 Dppa4 protein_coding protein_coding MGP_NODShiLtJ_T0012996.1 MGP_NODShiLtJ_G0011104.1 mouse_genomes_project 16 1039888 1040276 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044477.1 MGP_NODShiLtJ_G0022744.1 mouse_genomes_project 16 62607019 62608024 - MGP_NODShiLtJ_P0044477 Olfr186 protein_coding protein_coding MGP_NODShiLtJ_T0044478.1 MGP_NODShiLtJ_G0022744.1 mouse_genomes_project 16 62607616 62611466 - MGP_NODShiLtJ_P0044478 Olfr186 protein_coding protein_coding MGP_NODShiLtJ_T0044833.1 MGP_NODShiLtJ_G0022877.1 mouse_genomes_project 16 104341095 104597552 - MGP_NODShiLtJ_P0044833 Atp5o protein_coding protein_coding MGP_NODShiLtJ_T0044871.1 MGP_NODShiLtJ_G0022877.1 mouse_genomes_project 16 104593057 104602125 - MGP_NODShiLtJ_P0044871 Atp5o protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044872.1 MGP_NODShiLtJ_G0022877.1 mouse_genomes_project 16 104593060 104602257 - MGP_NODShiLtJ_P0044872 Atp5o protein_coding protein_coding MGP_NODShiLtJ_T0044873.1 MGP_NODShiLtJ_G0022877.1 mouse_genomes_project 16 104593065 104597254 - Atp5o protein_coding retained_intron MGP_NODShiLtJ_T0044874.1 MGP_NODShiLtJ_G0022877.1 mouse_genomes_project 16 104593067 104602116 - MGP_NODShiLtJ_P0044874 Atp5o protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044875.1 MGP_NODShiLtJ_G0022877.1 mouse_genomes_project 16 104594538 104601844 - Atp5o protein_coding processed_transcript MGP_NODShiLtJ_T0044876.1 MGP_NODShiLtJ_G0022877.1 mouse_genomes_project 16 104597428 104601988 - Atp5o protein_coding processed_transcript MGP_NODShiLtJ_T0044877.1 MGP_NODShiLtJ_G0022877.1 mouse_genomes_project 16 104598730 104602121 - Atp5o protein_coding retained_intron MGP_NODShiLtJ_T0043405.1 MGP_NODShiLtJ_G0022472.1 mouse_genomes_project 16 18614432 18625785 + MGP_NODShiLtJ_P0043405 Eif2b5 protein_coding protein_coding MGP_NODShiLtJ_T0043406.1 MGP_NODShiLtJ_G0022472.1 mouse_genomes_project 16 18622204 18625153 + MGP_NODShiLtJ_P0043406 Eif2b5 protein_coding protein_coding MGP_NODShiLtJ_T0003613.1 MGP_NODShiLtJ_G0003268.1 mouse_genomes_project 16 33402272 33411962 - Gm15657 antisense antisense MGP_NODShiLtJ_T0003614.1 MGP_NODShiLtJ_G0003268.1 mouse_genomes_project 16 33410255 33411960 - Gm15657 antisense antisense MGP_NODShiLtJ_T0003615.1 MGP_NODShiLtJ_G0003268.1 mouse_genomes_project 16 33410586 33412738 - Gm15657 antisense antisense MGP_NODShiLtJ_T0044933.1 MGP_NODShiLtJ_G0022897.1 mouse_genomes_project 16 107003624 107170752 - MGP_NODShiLtJ_P0044933 Hlcs protein_coding protein_coding MGP_NODShiLtJ_T0043377.1 MGP_NODShiLtJ_G0022468.1 mouse_genomes_project 16 18312492 18320575 - MGP_NODShiLtJ_P0043377 Map6d1 protein_coding protein_coding MGP_NODShiLtJ_T0044555.1 MGP_NODShiLtJ_G0022778.1 mouse_genomes_project 16 80763520 81190540 + MGP_NODShiLtJ_P0044555 Robo1 protein_coding protein_coding MGP_NODShiLtJ_T0044213.1 MGP_NODShiLtJ_G0022667.1 mouse_genomes_project 16 45484189 45557664 - MGP_NODShiLtJ_P0044213 Boc protein_coding protein_coding MGP_NODShiLtJ_T0044214.1 MGP_NODShiLtJ_G0022667.1 mouse_genomes_project 16 45484193 45557691 - MGP_NODShiLtJ_P0044214 Boc protein_coding protein_coding MGP_NODShiLtJ_T0044215.1 MGP_NODShiLtJ_G0022667.1 mouse_genomes_project 16 45484756 45557673 - MGP_NODShiLtJ_P0044215 Boc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044713.1 MGP_NODShiLtJ_G0022851.1 mouse_genomes_project 16 101997453 101998461 - MGP_NODShiLtJ_P0044713 Krtap11-1 protein_coding protein_coding MGP_NODShiLtJ_T0044127.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 40357865 41518583 + MGP_NODShiLtJ_P0044127 Lsamp protein_coding protein_coding MGP_NODShiLtJ_T0044128.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 40357875 42908661 + MGP_NODShiLtJ_P0044128 Lsamp protein_coding protein_coding MGP_NODShiLtJ_T0044129.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 40357890 42050940 + MGP_NODShiLtJ_P0044129 Lsamp protein_coding protein_coding MGP_NODShiLtJ_T0044130.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 40358099 41163787 + Lsamp protein_coding processed_transcript MGP_NODShiLtJ_T0044131.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 42197726 42877683 + MGP_NODShiLtJ_P0044131 Lsamp protein_coding protein_coding MGP_NODShiLtJ_T0044132.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 42197905 42914037 + MGP_NODShiLtJ_P0044132 Lsamp protein_coding protein_coding MGP_NODShiLtJ_T0044133.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 42198287 42205258 + MGP_NODShiLtJ_P0044133 Lsamp protein_coding protein_coding MGP_NODShiLtJ_T0044134.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 42875455 42906824 + MGP_NODShiLtJ_P0044134 Lsamp protein_coding protein_coding MGP_NODShiLtJ_T0044135.1 MGP_NODShiLtJ_G0022652.1 mouse_genomes_project 16 42875496 42906649 + MGP_NODShiLtJ_P0044135 Lsamp protein_coding protein_coding MGP_NODShiLtJ_T0097962.1 MGP_NODShiLtJ_G0036374.1 mouse_genomes_project 16 32494929 32495048 + n-R5s33 rRNA rRNA MGP_NODShiLtJ_T0098933.1 MGP_NODShiLtJ_G0037327.1 mouse_genomes_project 16 7193481 7193584 + Gm24392 snRNA snRNA MGP_NODShiLtJ_T0003633.1 MGP_NODShiLtJ_G0003282.1 mouse_genomes_project 16 59192303 59193653 - Zbtb11os1 antisense antisense MGP_NODShiLtJ_T0042630.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491016 493331 + MGP_NODShiLtJ_P0042630 Dnase1 protein_coding protein_coding MGP_NODShiLtJ_T0042631.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491044 494099 + MGP_NODShiLtJ_P0042631 Dnase1 protein_coding protein_coding MGP_NODShiLtJ_T0042632.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491047 492096 + MGP_NODShiLtJ_P0042632 Dnase1 protein_coding protein_coding MGP_NODShiLtJ_T0042633.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491105 494099 + MGP_NODShiLtJ_P0042633 Dnase1 protein_coding protein_coding MGP_NODShiLtJ_T0042634.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491172 494098 + Dnase1 protein_coding retained_intron MGP_NODShiLtJ_T0042635.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491175 494099 + Dnase1 protein_coding retained_intron MGP_NODShiLtJ_T0042636.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491229 493950 + MGP_NODShiLtJ_P0042636 Dnase1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042637.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491350 492335 + Dnase1 protein_coding retained_intron MGP_NODShiLtJ_T0042638.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 491378 493414 + Dnase1 protein_coding retained_intron MGP_NODShiLtJ_T0042639.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 492296 492946 + Dnase1 protein_coding retained_intron MGP_NODShiLtJ_T0042640.1 MGP_NODShiLtJ_G0022290.1 mouse_genomes_project 16 493204 494099 + MGP_NODShiLtJ_P0042640 Dnase1 protein_coding protein_coding MGP_NODShiLtJ_T0013081.1 MGP_NODShiLtJ_G0011189.1 mouse_genomes_project 16 107517057 107517268 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044932.1 MGP_NODShiLtJ_G0022896.1 mouse_genomes_project 16 106957497 107001447 + MGP_NODShiLtJ_P0044932 Sim2 protein_coding protein_coding MGP_NODShiLtJ_T0042881.1 MGP_NODShiLtJ_G0022353.1 mouse_genomes_project 16 8262956 8273149 - MGP_NODShiLtJ_P0042881 Rsl1d1 protein_coding protein_coding MGP_NODShiLtJ_T0042882.1 MGP_NODShiLtJ_G0022353.1 mouse_genomes_project 16 8263491 8264982 - Rsl1d1 protein_coding retained_intron MGP_NODShiLtJ_T0042883.1 MGP_NODShiLtJ_G0022353.1 mouse_genomes_project 16 8266430 8273082 - Rsl1d1 protein_coding retained_intron MGP_NODShiLtJ_T0098937.1 MGP_NODShiLtJ_G0037331.1 mouse_genomes_project 16 14924860 14924967 - Gm22129 snRNA snRNA MGP_NODShiLtJ_T0042667.1 MGP_NODShiLtJ_G0022297.1 mouse_genomes_project 16 1130854 1131379 - protein_coding retained_intron MGP_NODShiLtJ_T0042668.1 MGP_NODShiLtJ_G0022297.1 mouse_genomes_project 16 1130854 1139804 - MGP_NODShiLtJ_P0042668 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042669.1 MGP_NODShiLtJ_G0022297.1 mouse_genomes_project 16 1130854 1139856 - MGP_NODShiLtJ_P0042669 protein_coding protein_coding MGP_NODShiLtJ_T0042670.1 MGP_NODShiLtJ_G0022297.1 mouse_genomes_project 16 1130992 1132545 - protein_coding retained_intron MGP_NODShiLtJ_T0043224.1 MGP_NODShiLtJ_G0022427.1 mouse_genomes_project 16 15694483 15696436 - MGP_NODShiLtJ_P0043224 Gsc2 protein_coding protein_coding MGP_NODShiLtJ_T0013007.1 MGP_NODShiLtJ_G0011115.1 mouse_genomes_project 16 11360416 11361371 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044417.1 MGP_NODShiLtJ_G0022722.1 mouse_genomes_project 16 60509789 60555894 + MGP_NODShiLtJ_P0044417 Tomm70a protein_coding protein_coding MGP_NODShiLtJ_T0006824.1 MGP_NODShiLtJ_G0005615.1 mouse_genomes_project 16 108810051 108880619 - 1600002D24Rik lincRNA lincRNA MGP_NODShiLtJ_T0006825.1 MGP_NODShiLtJ_G0005615.1 mouse_genomes_project 16 108820820 108905048 - 1600002D24Rik lincRNA lincRNA MGP_NODShiLtJ_T0044661.1 MGP_NODShiLtJ_G0022809.1 mouse_genomes_project 16 99605654 99658477 + MGP_NODShiLtJ_P0044661 Map3k7cl protein_coding protein_coding MGP_NODShiLtJ_T0098944.1 MGP_NODShiLtJ_G0037338.1 mouse_genomes_project 16 21471648 21471754 + Gm23715 snRNA snRNA MGP_NODShiLtJ_T0000950.1 MGP_NODShiLtJ_G0000877.1 mouse_genomes_project 16 86872855 86875660 + TEC TEC MGP_NODShiLtJ_T0013000.1 MGP_NODShiLtJ_G0011108.1 mouse_genomes_project 16 6964568 6964775 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010044.1 MGP_NODShiLtJ_G0008177.1 mouse_genomes_project 16 41831684 41831744 + miRNA miRNA MGP_NODShiLtJ_T0044450.1 MGP_NODShiLtJ_G0022731.1 mouse_genomes_project 16 62157944 62161237 - MGP_NODShiLtJ_P0044450 Gm813 protein_coding protein_coding MGP_NODShiLtJ_T0043965.1 MGP_NODShiLtJ_G0022605.1 mouse_genomes_project 16 35836725 35838509 + MGP_NODShiLtJ_P0043965 Wdr5b protein_coding protein_coding MGP_NODShiLtJ_T0100206.1 MGP_NODShiLtJ_G0038600.1 mouse_genomes_project 16 31112650 31112793 - Gm24879 snoRNA snoRNA MGP_NODShiLtJ_T0043063.1 MGP_NODShiLtJ_G0022396.1 mouse_genomes_project 16 14770210 14787306 + MGP_NODShiLtJ_P0043063 Ypel1 protein_coding protein_coding MGP_NODShiLtJ_T0043064.1 MGP_NODShiLtJ_G0022396.1 mouse_genomes_project 16 14770672 14786911 + Ypel1 protein_coding processed_transcript MGP_NODShiLtJ_T0043065.1 MGP_NODShiLtJ_G0022396.1 mouse_genomes_project 16 14770712 14779176 + Ypel1 protein_coding retained_intron MGP_NODShiLtJ_T0043066.1 MGP_NODShiLtJ_G0022396.1 mouse_genomes_project 16 14770713 14782664 + MGP_NODShiLtJ_P0043066 Ypel1 protein_coding protein_coding MGP_NODShiLtJ_T0043067.1 MGP_NODShiLtJ_G0022396.1 mouse_genomes_project 16 14770740 14787615 + MGP_NODShiLtJ_P0043067 Ypel1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043068.1 MGP_NODShiLtJ_G0022396.1 mouse_genomes_project 16 14770743 14782746 + MGP_NODShiLtJ_P0043068 Ypel1 protein_coding protein_coding MGP_NODShiLtJ_T0043069.1 MGP_NODShiLtJ_G0022396.1 mouse_genomes_project 16 14770818 14783264 + MGP_NODShiLtJ_P0043069 Ypel1 protein_coding protein_coding MGP_NODShiLtJ_T0043593.1 MGP_NODShiLtJ_G0022510.1 mouse_genomes_project 16 21691225 21696635 - MGP_NODShiLtJ_P0043593 BC106179 protein_coding protein_coding MGP_NODShiLtJ_T0042705.1 MGP_NODShiLtJ_G0022304.1 mouse_genomes_project 16 1373347 1390068 + MGP_NODShiLtJ_P0042705 4930562C15Rik protein_coding non_stop_decay MGP_NODShiLtJ_T0042706.1 MGP_NODShiLtJ_G0022304.1 mouse_genomes_project 16 1373347 1404262 + MGP_NODShiLtJ_P0042706 4930562C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0042707.1 MGP_NODShiLtJ_G0022304.1 mouse_genomes_project 16 1379058 1390074 + MGP_NODShiLtJ_P0042707 4930562C15Rik protein_coding non_stop_decay MGP_NODShiLtJ_T0042708.1 MGP_NODShiLtJ_G0022304.1 mouse_genomes_project 16 1388679 1396539 + MGP_NODShiLtJ_P0042708 4930562C15Rik protein_coding protein_coding MGP_NODShiLtJ_T0042709.1 MGP_NODShiLtJ_G0022304.1 mouse_genomes_project 16 1397049 1403920 + MGP_NODShiLtJ_P0042709 4930562C15Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042710.1 MGP_NODShiLtJ_G0022304.1 mouse_genomes_project 16 1400893 1401749 + 4930562C15Rik protein_coding retained_intron MGP_NODShiLtJ_T0006762.1 MGP_NODShiLtJ_G0005568.1 mouse_genomes_project 16 7957707 7960493 - Gm21859 lincRNA lincRNA MGP_NODShiLtJ_T0006803.1 MGP_NODShiLtJ_G0005601.1 mouse_genomes_project 16 60570169 60577023 + Gm16892 lincRNA lincRNA MGP_NODShiLtJ_T0045067.1 MGP_NODShiLtJ_G0022918.1 mouse_genomes_project 16 110452551 110540227 + MGP_NODShiLtJ_P0045067 Bace2 protein_coding protein_coding MGP_NODShiLtJ_T0044115.1 MGP_NODShiLtJ_G0022647.1 mouse_genomes_project 16 38753109 38875422 - MGP_NODShiLtJ_P0044115 Arhgap31 protein_coding protein_coding MGP_NODShiLtJ_T0044116.1 MGP_NODShiLtJ_G0022647.1 mouse_genomes_project 16 38779163 38875047 - Arhgap31 protein_coding processed_transcript MGP_NODShiLtJ_T0044117.1 MGP_NODShiLtJ_G0022647.1 mouse_genomes_project 16 38796898 38875046 - Arhgap31 protein_coding retained_intron MGP_NODShiLtJ_T0044977.1 MGP_NODShiLtJ_G0022902.1 mouse_genomes_project 16 107466811 107595709 + MGP_NODShiLtJ_P0044977 Dyrk1a protein_coding protein_coding MGP_NODShiLtJ_T0044978.1 MGP_NODShiLtJ_G0022902.1 mouse_genomes_project 16 107467280 107591411 + MGP_NODShiLtJ_P0044978 Dyrk1a protein_coding protein_coding MGP_NODShiLtJ_T0044979.1 MGP_NODShiLtJ_G0022902.1 mouse_genomes_project 16 107467665 107564790 + MGP_NODShiLtJ_P0044979 Dyrk1a protein_coding protein_coding MGP_NODShiLtJ_T0044980.1 MGP_NODShiLtJ_G0022902.1 mouse_genomes_project 16 107467708 107596159 + MGP_NODShiLtJ_P0044980 Dyrk1a protein_coding protein_coding MGP_NODShiLtJ_T0044981.1 MGP_NODShiLtJ_G0022902.1 mouse_genomes_project 16 107467708 107567674 + MGP_NODShiLtJ_P0044981 Dyrk1a protein_coding protein_coding MGP_NODShiLtJ_T0044982.1 MGP_NODShiLtJ_G0022902.1 mouse_genomes_project 16 107567738 107577651 + Dyrk1a protein_coding retained_intron MGP_NODShiLtJ_T0013079.1 MGP_NODShiLtJ_G0011187.1 mouse_genomes_project 16 104155199 104156512 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043250.1 MGP_NODShiLtJ_G0022436.1 mouse_genomes_project 16 16054749 16063526 - MGP_NODShiLtJ_P0043250 Ranbp1 protein_coding protein_coding MGP_NODShiLtJ_T0043251.1 MGP_NODShiLtJ_G0022436.1 mouse_genomes_project 16 16059935 16063610 - Ranbp1 protein_coding retained_intron MGP_NODShiLtJ_T0043252.1 MGP_NODShiLtJ_G0022436.1 mouse_genomes_project 16 16060171 16063398 - Ranbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0010048.1 MGP_NODShiLtJ_G0008181.1 mouse_genomes_project 16 44969578 44969704 + Mir3470b miRNA miRNA MGP_NODShiLtJ_T0043509.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19655270 19892737 + MGP_NODShiLtJ_P0043509 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043510.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19655270 19819793 + MGP_NODShiLtJ_P0043510 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043511.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19655270 19892737 + MGP_NODShiLtJ_P0043511 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043512.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19655321 19892737 + MGP_NODShiLtJ_P0043512 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043513.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19655348 19783241 + MGP_NODShiLtJ_P0043513 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043514.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19655353 19892729 + MGP_NODShiLtJ_P0043514 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043515.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19655424 19667126 + MGP_NODShiLtJ_P0043515 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043516.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19701350 19889629 + MGP_NODShiLtJ_P0043516 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043517.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19745448 19892732 + MGP_NODShiLtJ_P0043517 Vps8 protein_coding protein_coding MGP_NODShiLtJ_T0043518.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19764293 19769993 + Vps8 protein_coding retained_intron MGP_NODShiLtJ_T0043519.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19764363 19799137 + MGP_NODShiLtJ_P0043519 Vps8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043520.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19808938 19822076 + Vps8 protein_coding retained_intron MGP_NODShiLtJ_T0043521.1 MGP_NODShiLtJ_G0022489.1 mouse_genomes_project 16 19873717 19892473 + Vps8 protein_coding processed_transcript MGP_NODShiLtJ_T0044332.1 MGP_NODShiLtJ_G0022700.1 mouse_genomes_project 16 50822690 50984452 + MGP_NODShiLtJ_P0044332 Myh15 protein_coding protein_coding MGP_NODShiLtJ_T0043606.1 MGP_NODShiLtJ_G0022517.1 mouse_genomes_project 16 22491522 22515246 - MGP_NODShiLtJ_P0043606 Bcl6 protein_coding protein_coding MGP_NODShiLtJ_T0043607.1 MGP_NODShiLtJ_G0022517.1 mouse_genomes_project 16 22494189 22498932 - Bcl6 protein_coding retained_intron MGP_NODShiLtJ_T0006811.1 MGP_NODShiLtJ_G0005607.1 mouse_genomes_project 16 96247718 96260790 + Mir155hg lincRNA lincRNA MGP_NODShiLtJ_T0006812.1 MGP_NODShiLtJ_G0005607.1 mouse_genomes_project 16 96258567 96260790 + Mir155hg lincRNA lincRNA MGP_NODShiLtJ_T0044337.1 MGP_NODShiLtJ_G0022702.1 mouse_genomes_project 16 51710135 51775214 + MGP_NODShiLtJ_P0044337 Cd47 protein_coding protein_coding MGP_NODShiLtJ_T0044338.1 MGP_NODShiLtJ_G0022702.1 mouse_genomes_project 16 51710304 51771063 + MGP_NODShiLtJ_P0044338 Cd47 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044339.1 MGP_NODShiLtJ_G0022702.1 mouse_genomes_project 16 51723756 51771271 + MGP_NODShiLtJ_P0044339 Cd47 protein_coding protein_coding MGP_NODShiLtJ_T0043926.1 MGP_NODShiLtJ_G0022595.1 mouse_genomes_project 16 34862634 35022822 + MGP_NODShiLtJ_P0043926 Adcy5 protein_coding protein_coding MGP_NODShiLtJ_T0044887.1 MGP_NODShiLtJ_G0022885.1 mouse_genomes_project 16 105059303 105073240 - MGP_NODShiLtJ_P0044887 Kcne1 protein_coding protein_coding MGP_NODShiLtJ_T0044888.1 MGP_NODShiLtJ_G0022885.1 mouse_genomes_project 16 105062212 105072646 - MGP_NODShiLtJ_P0044888 Kcne1 protein_coding protein_coding MGP_NODShiLtJ_T0044101.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38711938 38745956 + MGP_NODShiLtJ_P0044101 Tmem39a protein_coding protein_coding MGP_NODShiLtJ_T0044102.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38716730 38746928 + MGP_NODShiLtJ_P0044102 Tmem39a protein_coding protein_coding MGP_NODShiLtJ_T0044103.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38716730 38746928 + MGP_NODShiLtJ_P0044103 Tmem39a protein_coding protein_coding MGP_NODShiLtJ_T0044104.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38716779 38741023 + MGP_NODShiLtJ_P0044104 Tmem39a protein_coding protein_coding MGP_NODShiLtJ_T0044105.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38716804 38727970 + Tmem39a protein_coding processed_transcript MGP_NODShiLtJ_T0044106.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38718107 38736766 + MGP_NODShiLtJ_P0044106 Tmem39a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044107.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38730221 38740191 + Tmem39a protein_coding retained_intron MGP_NODShiLtJ_T0044108.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38730544 38746208 + MGP_NODShiLtJ_P0044108 Tmem39a protein_coding protein_coding MGP_NODShiLtJ_T0044109.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38736874 38745708 + MGP_NODShiLtJ_P0044109 Tmem39a protein_coding protein_coding MGP_NODShiLtJ_T0044110.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38740181 38741656 + Tmem39a protein_coding retained_intron MGP_NODShiLtJ_T0044111.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38740258 38741405 + Tmem39a protein_coding retained_intron MGP_NODShiLtJ_T0044112.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38740273 38745911 + MGP_NODShiLtJ_P0044112 Tmem39a protein_coding protein_coding MGP_NODShiLtJ_T0044113.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38741976 38746112 + Tmem39a protein_coding processed_transcript MGP_NODShiLtJ_T0044114.1 MGP_NODShiLtJ_G0022646.1 mouse_genomes_project 16 38742804 38746072 + Tmem39a protein_coding retained_intron MGP_NODShiLtJ_T0097958.1 MGP_NODShiLtJ_G0036370.1 mouse_genomes_project 16 5713699 5713792 - Gm22224 rRNA rRNA MGP_NODShiLtJ_T0044626.1 MGP_NODShiLtJ_G0022801.1 mouse_genomes_project 16 97047090 97187769 - MGP_NODShiLtJ_P0044626 Cyyr1 protein_coding protein_coding MGP_NODShiLtJ_T0044627.1 MGP_NODShiLtJ_G0022801.1 mouse_genomes_project 16 97083501 97187769 - MGP_NODShiLtJ_P0044627 Cyyr1 protein_coding protein_coding MGP_NODShiLtJ_T0044628.1 MGP_NODShiLtJ_G0022801.1 mouse_genomes_project 16 97180155 97190740 - Cyyr1 protein_coding retained_intron MGP_NODShiLtJ_T0044629.1 MGP_NODShiLtJ_G0022801.1 mouse_genomes_project 16 97187915 97190740 - Cyyr1 protein_coding processed_transcript MGP_NODShiLtJ_T0044086.1 MGP_NODShiLtJ_G0022640.1 mouse_genomes_project 16 38505133 38521480 + MGP_NODShiLtJ_P0044086 Popdc2 protein_coding protein_coding MGP_NODShiLtJ_T0044087.1 MGP_NODShiLtJ_G0022640.1 mouse_genomes_project 16 38505169 38521480 + MGP_NODShiLtJ_P0044087 Popdc2 protein_coding protein_coding MGP_NODShiLtJ_T0044088.1 MGP_NODShiLtJ_G0022640.1 mouse_genomes_project 16 38512036 38517437 + Popdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0044089.1 MGP_NODShiLtJ_G0022640.1 mouse_genomes_project 16 38512643 38521027 + Popdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0044090.1 MGP_NODShiLtJ_G0022640.1 mouse_genomes_project 16 38515215 38517380 + Popdc2 protein_coding processed_transcript MGP_NODShiLtJ_T0097963.1 MGP_NODShiLtJ_G0036375.1 mouse_genomes_project 16 37956354 37956470 + n-R5s34 rRNA rRNA MGP_NODShiLtJ_T0042711.1 MGP_NODShiLtJ_G0022305.1 mouse_genomes_project 16 1412245 1417787 - MGP_NODShiLtJ_P0042711 Ubald1 protein_coding protein_coding MGP_NODShiLtJ_T0042712.1 MGP_NODShiLtJ_G0022305.1 mouse_genomes_project 16 1412255 1417279 - Ubald1 protein_coding retained_intron MGP_NODShiLtJ_T0044689.1 MGP_NODShiLtJ_G0022829.1 mouse_genomes_project 16 101119443 101119747 - MGP_NODShiLtJ_P0044689 Krtap19-4 protein_coding protein_coding MGP_NODShiLtJ_T0042805.1 MGP_NODShiLtJ_G0022333.1 mouse_genomes_project 16 7122263 7126660 + MGP_NODShiLtJ_P0042805 Rpl39l protein_coding protein_coding MGP_NODShiLtJ_T0042806.1 MGP_NODShiLtJ_G0022333.1 mouse_genomes_project 16 7122265 7126941 + MGP_NODShiLtJ_P0042806 Rpl39l protein_coding protein_coding MGP_NODShiLtJ_T0043628.1 MGP_NODShiLtJ_G0022525.1 mouse_genomes_project 16 25342510 25492842 + MGP_NODShiLtJ_P0043628 Il1rap protein_coding protein_coding MGP_NODShiLtJ_T0043629.1 MGP_NODShiLtJ_G0022525.1 mouse_genomes_project 16 25342548 25491983 + MGP_NODShiLtJ_P0043629 Il1rap protein_coding protein_coding MGP_NODShiLtJ_T0043630.1 MGP_NODShiLtJ_G0022525.1 mouse_genomes_project 16 25342559 25468533 + MGP_NODShiLtJ_P0043630 Il1rap protein_coding protein_coding MGP_NODShiLtJ_T0043631.1 MGP_NODShiLtJ_G0022525.1 mouse_genomes_project 16 25342563 25485374 + MGP_NODShiLtJ_P0043631 Il1rap protein_coding protein_coding MGP_NODShiLtJ_T0043632.1 MGP_NODShiLtJ_G0022525.1 mouse_genomes_project 16 25389206 25482691 + MGP_NODShiLtJ_P0043632 Il1rap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043633.1 MGP_NODShiLtJ_G0022525.1 mouse_genomes_project 16 25490063 25497681 + MGP_NODShiLtJ_P0043633 Il1rap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043634.1 MGP_NODShiLtJ_G0022525.1 mouse_genomes_project 16 25494605 25495792 + Il1rap protein_coding processed_transcript MGP_NODShiLtJ_T0011306.1 MGP_NODShiLtJ_G0009439.1 mouse_genomes_project 16 96149734 96150056 - Gm25292 misc_RNA misc_RNA MGP_NODShiLtJ_T0097968.1 MGP_NODShiLtJ_G0036380.1 mouse_genomes_project 16 110605248 110605356 - Gm24777 rRNA rRNA MGP_NODShiLtJ_T0098946.1 MGP_NODShiLtJ_G0037340.1 mouse_genomes_project 16 22952650 22952713 - Gm24440 snRNA snRNA MGP_NODShiLtJ_T0043933.1 MGP_NODShiLtJ_G0022598.1 mouse_genomes_project 16 35277231 35407480 + Sema5b protein_coding retained_intron MGP_NODShiLtJ_T0043934.1 MGP_NODShiLtJ_G0022598.1 mouse_genomes_project 16 35277448 35427877 + MGP_NODShiLtJ_P0043934 Sema5b protein_coding protein_coding MGP_NODShiLtJ_T0043935.1 MGP_NODShiLtJ_G0022598.1 mouse_genomes_project 16 35277657 35427877 + MGP_NODShiLtJ_P0043935 Sema5b protein_coding protein_coding MGP_NODShiLtJ_T0043936.1 MGP_NODShiLtJ_G0022598.1 mouse_genomes_project 16 35420437 35420830 + Sema5b protein_coding retained_intron MGP_NODShiLtJ_T0043937.1 MGP_NODShiLtJ_G0022598.1 mouse_genomes_project 16 35420927 35428348 + MGP_NODShiLtJ_P0043937 Sema5b protein_coding protein_coding MGP_NODShiLtJ_T0043938.1 MGP_NODShiLtJ_G0022598.1 mouse_genomes_project 16 35421777 35422623 + Sema5b protein_coding retained_intron MGP_NODShiLtJ_T0043939.1 MGP_NODShiLtJ_G0022598.1 mouse_genomes_project 16 35424920 35426930 + MGP_NODShiLtJ_P0043939 Sema5b protein_coding protein_coding MGP_NODShiLtJ_T0043940.1 MGP_NODShiLtJ_G0022598.1 mouse_genomes_project 16 35426086 35427070 + Sema5b protein_coding retained_intron MGP_NODShiLtJ_T0044935.1 MGP_NODShiLtJ_G0022899.1 mouse_genomes_project 16 107243099 107254586 - MGP_NODShiLtJ_P0044935 Pigp protein_coding protein_coding MGP_NODShiLtJ_T0044936.1 MGP_NODShiLtJ_G0022899.1 mouse_genomes_project 16 107248762 107255997 - MGP_NODShiLtJ_P0044936 Pigp protein_coding protein_coding MGP_NODShiLtJ_T0044937.1 MGP_NODShiLtJ_G0022899.1 mouse_genomes_project 16 107248762 107255997 - MGP_NODShiLtJ_P0044937 Pigp protein_coding protein_coding MGP_NODShiLtJ_T0044938.1 MGP_NODShiLtJ_G0022899.1 mouse_genomes_project 16 107248762 107255008 - MGP_NODShiLtJ_P0044938 Pigp protein_coding protein_coding MGP_NODShiLtJ_T0044939.1 MGP_NODShiLtJ_G0022899.1 mouse_genomes_project 16 107248762 107254990 - MGP_NODShiLtJ_P0044939 Pigp protein_coding protein_coding MGP_NODShiLtJ_T0044940.1 MGP_NODShiLtJ_G0022899.1 mouse_genomes_project 16 107248767 107249817 - Pigp protein_coding processed_transcript MGP_NODShiLtJ_T0044941.1 MGP_NODShiLtJ_G0022899.1 mouse_genomes_project 16 107249007 107254806 - MGP_NODShiLtJ_P0044941 Pigp protein_coding protein_coding MGP_NODShiLtJ_T0013012.1 MGP_NODShiLtJ_G0011120.1 mouse_genomes_project 16 13398807 13399090 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003628.1 MGP_NODShiLtJ_G0003279.1 mouse_genomes_project 16 47084969 47087926 + Gm15640 antisense antisense MGP_NODShiLtJ_T0044908.1 MGP_NODShiLtJ_G0022890.1 mouse_genomes_project 16 106440969 106445377 + MGP_NODShiLtJ_P0044908 Cbr1 protein_coding protein_coding MGP_NODShiLtJ_T0010021.1 MGP_NODShiLtJ_G0008154.1 mouse_genomes_project 16 11525658 11525725 + Mir484 miRNA miRNA MGP_NODShiLtJ_T0044584.1 MGP_NODShiLtJ_G0022785.1 mouse_genomes_project 16 85397038 85397542 - MGP_NODShiLtJ_P0044584 Fau protein_coding protein_coding MGP_NODShiLtJ_T0043613.1 MGP_NODShiLtJ_G0022520.1 mouse_genomes_project 16 24349085 24499440 + MGP_NODShiLtJ_P0043613 Trp63 protein_coding protein_coding MGP_NODShiLtJ_T0043614.1 MGP_NODShiLtJ_G0022520.1 mouse_genomes_project 16 24349087 24574080 + MGP_NODShiLtJ_P0043614 Trp63 protein_coding protein_coding MGP_NODShiLtJ_T0043615.1 MGP_NODShiLtJ_G0022520.1 mouse_genomes_project 16 24349087 24559137 + MGP_NODShiLtJ_P0043615 Trp63 protein_coding protein_coding MGP_NODShiLtJ_T0043616.1 MGP_NODShiLtJ_G0022520.1 mouse_genomes_project 16 24349087 24574095 + MGP_NODShiLtJ_P0043616 Trp63 protein_coding protein_coding MGP_NODShiLtJ_T0043617.1 MGP_NODShiLtJ_G0022520.1 mouse_genomes_project 16 24480032 24559137 + MGP_NODShiLtJ_P0043617 Trp63 protein_coding protein_coding MGP_NODShiLtJ_T0043618.1 MGP_NODShiLtJ_G0022520.1 mouse_genomes_project 16 24480032 24574095 + MGP_NODShiLtJ_P0043618 Trp63 protein_coding protein_coding MGP_NODShiLtJ_T0043619.1 MGP_NODShiLtJ_G0022520.1 mouse_genomes_project 16 24480032 24549858 + MGP_NODShiLtJ_P0043619 Trp63 protein_coding protein_coding MGP_NODShiLtJ_T0043620.1 MGP_NODShiLtJ_G0022520.1 mouse_genomes_project 16 24480032 24574095 + MGP_NODShiLtJ_P0043620 Trp63 protein_coding protein_coding MGP_NODShiLtJ_T0010073.1 MGP_NODShiLtJ_G0008206.1 mouse_genomes_project 16 111018966 111019025 - Mir6964 miRNA miRNA MGP_NODShiLtJ_T0010034.1 MGP_NODShiLtJ_G0008167.1 mouse_genomes_project 16 20971111 20971218 + Mir6362 miRNA miRNA MGP_NODShiLtJ_T0042826.1 MGP_NODShiLtJ_G0022340.1 mouse_genomes_project 16 7523890 7567435 - MGP_NODShiLtJ_P0042826 Dexi protein_coding protein_coding MGP_NODShiLtJ_T0042827.1 MGP_NODShiLtJ_G0022340.1 mouse_genomes_project 16 7554599 7556202 - Dexi protein_coding processed_transcript MGP_NODShiLtJ_T0042828.1 MGP_NODShiLtJ_G0022340.1 mouse_genomes_project 16 7554599 7567435 - MGP_NODShiLtJ_P0042828 Dexi protein_coding protein_coding MGP_NODShiLtJ_T0044708.1 MGP_NODShiLtJ_G0022846.1 mouse_genomes_project 16 101517559 101518087 + MGP_NODShiLtJ_P0044708 Krtap20-2 protein_coding protein_coding MGP_NODShiLtJ_T0006804.1 MGP_NODShiLtJ_G0005602.1 mouse_genomes_project 16 60684644 60685253 + Gm26800 lincRNA lincRNA MGP_NODShiLtJ_T0043877.1 MGP_NODShiLtJ_G0022583.1 mouse_genomes_project 16 32815818 32870808 + MGP_NODShiLtJ_P0043877 Snx4 protein_coding protein_coding MGP_NODShiLtJ_T0010024.1 MGP_NODShiLtJ_G0008157.1 mouse_genomes_project 16 15978341 15978423 - Mir6366 miRNA miRNA MGP_NODShiLtJ_T0043345.1 MGP_NODShiLtJ_G0022454.1 mouse_genomes_project 16 16778675 16837192 + MGP_NODShiLtJ_P0043345 Hira protein_coding protein_coding MGP_NODShiLtJ_T0043346.1 MGP_NODShiLtJ_G0022454.1 mouse_genomes_project 16 16778704 16880290 + MGP_NODShiLtJ_P0043346 Hira protein_coding protein_coding MGP_NODShiLtJ_T0043347.1 MGP_NODShiLtJ_G0022454.1 mouse_genomes_project 16 16778908 16819500 + Hira protein_coding retained_intron MGP_NODShiLtJ_T0043348.1 MGP_NODShiLtJ_G0022454.1 mouse_genomes_project 16 16778908 16844123 + MGP_NODShiLtJ_P0043348 Hira protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043349.1 MGP_NODShiLtJ_G0022454.1 mouse_genomes_project 16 16779050 16825748 + Hira protein_coding retained_intron MGP_NODShiLtJ_T0043350.1 MGP_NODShiLtJ_G0022454.1 mouse_genomes_project 16 16832234 16834819 + Hira protein_coding processed_transcript MGP_NODShiLtJ_T0043351.1 MGP_NODShiLtJ_G0022454.1 mouse_genomes_project 16 16834738 16844178 + Hira protein_coding retained_intron MGP_NODShiLtJ_T0043352.1 MGP_NODShiLtJ_G0022454.1 mouse_genomes_project 16 16842055 16856543 + Hira protein_coding processed_transcript MGP_NODShiLtJ_T0098968.1 MGP_NODShiLtJ_G0037362.1 mouse_genomes_project 16 58051468 58051575 + Gm22977 snRNA snRNA MGP_NODShiLtJ_T0013065.1 MGP_NODShiLtJ_G0011173.1 mouse_genomes_project 16 64720558 64721494 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043167.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382881 15408354 + MGP_NODShiLtJ_P0043167 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043168.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382884 15402801 + Smpd4 protein_coding processed_transcript MGP_NODShiLtJ_T0043169.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382884 15408353 + MGP_NODShiLtJ_P0043169 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043170.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382884 15389972 + MGP_NODShiLtJ_P0043170 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043171.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382887 15390174 + MGP_NODShiLtJ_P0043171 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043172.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382887 15406873 + MGP_NODShiLtJ_P0043172 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043173.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382890 15387812 + Smpd4 protein_coding retained_intron MGP_NODShiLtJ_T0043174.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382890 15408353 + Smpd4 protein_coding retained_intron MGP_NODShiLtJ_T0043175.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382890 15385523 + Smpd4 protein_coding retained_intron MGP_NODShiLtJ_T0043176.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382890 15408353 + MGP_NODShiLtJ_P0043176 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043177.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382890 15389366 + MGP_NODShiLtJ_P0043177 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043178.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382901 15402051 + MGP_NODShiLtJ_P0043178 Smpd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043179.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382904 15390211 + MGP_NODShiLtJ_P0043179 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043180.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382908 15405674 + Smpd4 protein_coding retained_intron MGP_NODShiLtJ_T0043181.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15382916 15389530 + MGP_NODShiLtJ_P0043181 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043182.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15383044 15387474 + MGP_NODShiLtJ_P0043182 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043183.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15385014 15406329 + MGP_NODShiLtJ_P0043183 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043184.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15385014 15406329 + MGP_NODShiLtJ_P0043184 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043185.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15385014 15406329 + MGP_NODShiLtJ_P0043185 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043186.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15385014 15406329 + MGP_NODShiLtJ_P0043186 Smpd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043187.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15385014 15406329 + MGP_NODShiLtJ_P0043187 Smpd4 protein_coding protein_coding MGP_NODShiLtJ_T0043188.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15401847 15404588 + Smpd4 protein_coding retained_intron MGP_NODShiLtJ_T0043189.1 MGP_NODShiLtJ_G0022416.1 mouse_genomes_project 16 15402112 15404492 + Smpd4 protein_coding retained_intron MGP_NODShiLtJ_T0044599.1 MGP_NODShiLtJ_G0022794.1 mouse_genomes_project 16 88373078 88541458 - MGP_NODShiLtJ_P0044599 Tmprss15 protein_coding protein_coding MGP_NODShiLtJ_T0044600.1 MGP_NODShiLtJ_G0022794.1 mouse_genomes_project 16 88373534 88541463 - MGP_NODShiLtJ_P0044600 Tmprss15 protein_coding protein_coding MGP_NODShiLtJ_T0044686.1 MGP_NODShiLtJ_G0022826.1 mouse_genomes_project 16 101101522 101102015 - MGP_NODShiLtJ_P0044686 Krtap19-1 protein_coding protein_coding MGP_NODShiLtJ_T0097964.1 MGP_NODShiLtJ_G0036376.1 mouse_genomes_project 16 41831652 41831744 + Gm26381 rRNA rRNA MGP_NODShiLtJ_T0098934.1 MGP_NODShiLtJ_G0037328.1 mouse_genomes_project 16 8042659 8042843 + Gm24961 snRNA snRNA MGP_NODShiLtJ_T0010022.1 MGP_NODShiLtJ_G0008155.1 mouse_genomes_project 16 14829277 14829359 - Mir130b miRNA miRNA MGP_NODShiLtJ_T0043605.1 MGP_NODShiLtJ_G0022516.1 mouse_genomes_project 16 22454023 22459246 - MGP_NODShiLtJ_P0043605 Rtp2 protein_coding protein_coding MGP_NODShiLtJ_T0006773.1 MGP_NODShiLtJ_G0005578.1 mouse_genomes_project 16 20068718 20081503 + 1300002E11Rik lincRNA lincRNA MGP_NODShiLtJ_T0006774.1 MGP_NODShiLtJ_G0005578.1 mouse_genomes_project 16 20068733 20086015 + 1300002E11Rik lincRNA lincRNA MGP_NODShiLtJ_T0006775.1 MGP_NODShiLtJ_G0005578.1 mouse_genomes_project 16 20068763 20081503 + 1300002E11Rik lincRNA lincRNA MGP_NODShiLtJ_T0100211.1 MGP_NODShiLtJ_G0038605.1 mouse_genomes_project 16 38279435 38279568 + Gm25617 snoRNA snoRNA MGP_NODShiLtJ_T0098949.1 MGP_NODShiLtJ_G0037343.1 mouse_genomes_project 16 34944955 34945083 - Gm25179 snRNA snRNA MGP_NODShiLtJ_T0100204.1 MGP_NODShiLtJ_G0038598.1 mouse_genomes_project 16 23454839 23454973 + Gm22672 snoRNA snoRNA MGP_NODShiLtJ_T0098967.1 MGP_NODShiLtJ_G0037361.1 mouse_genomes_project 16 52892560 52892667 - Gm24925 snRNA snRNA MGP_NODShiLtJ_T0010047.1 MGP_NODShiLtJ_G0008180.1 mouse_genomes_project 16 44738967 44739078 + Gm25996 miRNA miRNA MGP_NODShiLtJ_T0003616.1 MGP_NODShiLtJ_G0003269.1 mouse_genomes_project 16 33599826 33600900 + Gm15829 antisense antisense MGP_NODShiLtJ_T0043355.1 MGP_NODShiLtJ_G0022457.1 mouse_genomes_project 16 17361428 17362370 - MGP_NODShiLtJ_P0043355 Olfr165 protein_coding protein_coding MGP_NODShiLtJ_T0006792.1 MGP_NODShiLtJ_G0005595.1 mouse_genomes_project 16 50998036 51056703 - 1700026J12Rik lincRNA lincRNA MGP_NODShiLtJ_T0006793.1 MGP_NODShiLtJ_G0005595.1 mouse_genomes_project 16 50998063 51056703 - 1700026J12Rik lincRNA lincRNA MGP_NODShiLtJ_T0042991.1 MGP_NODShiLtJ_G0022381.1 mouse_genomes_project 16 13019539 13064904 - MGP_NODShiLtJ_P0042991 Ube2v2 protein_coding protein_coding MGP_NODShiLtJ_T0010043.1 MGP_NODShiLtJ_G0008176.1 mouse_genomes_project 16 40842311 40842413 - Gm27887 miRNA miRNA MGP_NODShiLtJ_T0042742.1 MGP_NODShiLtJ_G0022316.1 mouse_genomes_project 16 1710034 1751902 + MGP_NODShiLtJ_P0042742 Sec14l5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042743.1 MGP_NODShiLtJ_G0022316.1 mouse_genomes_project 16 1710257 1748529 + MGP_NODShiLtJ_P0042743 Sec14l5 protein_coding protein_coding MGP_NODShiLtJ_T0098974.1 MGP_NODShiLtJ_G0037368.1 mouse_genomes_project 16 81666921 81667088 - Gm25699 snRNA snRNA MGP_NODShiLtJ_T0006790.1 MGP_NODShiLtJ_G0005593.1 mouse_genomes_project 16 44322255 44332809 - Gm15713 lincRNA lincRNA MGP_NODShiLtJ_T0043500.1 MGP_NODShiLtJ_G0022486.1 mouse_genomes_project 16 18857471 18866729 + MGP_NODShiLtJ_P0043500 Chrd protein_coding protein_coding MGP_NODShiLtJ_T0043501.1 MGP_NODShiLtJ_G0022486.1 mouse_genomes_project 16 18857471 18862497 + MGP_NODShiLtJ_P0043501 Chrd protein_coding protein_coding MGP_NODShiLtJ_T0043502.1 MGP_NODShiLtJ_G0022486.1 mouse_genomes_project 16 18857471 18866729 + MGP_NODShiLtJ_P0043502 Chrd protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043503.1 MGP_NODShiLtJ_G0022486.1 mouse_genomes_project 16 18860550 18866727 + Chrd protein_coding retained_intron MGP_NODShiLtJ_T0044461.1 MGP_NODShiLtJ_G0022737.1 mouse_genomes_project 16 62354002 62355023 - MGP_NODShiLtJ_P0044461 protein_coding protein_coding MGP_NODShiLtJ_T0044462.1 MGP_NODShiLtJ_G0022737.1 mouse_genomes_project 16 62354529 62357006 - MGP_NODShiLtJ_P0044462 protein_coding protein_coding MGP_NODShiLtJ_T0042783.1 MGP_NODShiLtJ_G0022329.1 mouse_genomes_project 16 5497050 5500186 + MGP_NODShiLtJ_P0042783 Gm43786 protein_coding protein_coding MGP_NODShiLtJ_T0042784.1 MGP_NODShiLtJ_G0022329.1 mouse_genomes_project 16 5499110 5500192 + Gm43786 protein_coding processed_transcript MGP_NODShiLtJ_T0010023.1 MGP_NODShiLtJ_G0008156.1 mouse_genomes_project 16 14829616 14829713 - Mir301b miRNA miRNA MGP_NODShiLtJ_T0044267.1 MGP_NODShiLtJ_G0022679.1 mouse_genomes_project 16 46538479 46586520 - Gm609 protein_coding processed_transcript MGP_NODShiLtJ_T0044268.1 MGP_NODShiLtJ_G0022679.1 mouse_genomes_project 16 46545402 46620480 - MGP_NODShiLtJ_P0044268 Gm609 protein_coding protein_coding MGP_NODShiLtJ_T0043686.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29764198 29804465 - Tmem44 protein_coding retained_intron MGP_NODShiLtJ_T0043687.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29764198 29805089 - MGP_NODShiLtJ_P0043687 Tmem44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043688.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29766025 29805097 - MGP_NODShiLtJ_P0043688 Tmem44 protein_coding protein_coding MGP_NODShiLtJ_T0043689.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29766027 29805097 - MGP_NODShiLtJ_P0043689 Tmem44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043690.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29766304 29795193 - MGP_NODShiLtJ_P0043690 Tmem44 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043691.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29767049 29805018 - MGP_NODShiLtJ_P0043691 Tmem44 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043692.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29769831 29805058 - Tmem44 protein_coding retained_intron MGP_NODShiLtJ_T0043693.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29770212 29805361 - Tmem44 protein_coding retained_intron MGP_NODShiLtJ_T0043694.1 MGP_NODShiLtJ_G0022542.1 mouse_genomes_project 16 29797938 29805047 - Tmem44 protein_coding processed_transcript MGP_NODShiLtJ_T0010049.1 MGP_NODShiLtJ_G0008182.1 mouse_genomes_project 16 45556839 45556923 - Mir3081 miRNA miRNA MGP_NODShiLtJ_T0044205.1 MGP_NODShiLtJ_G0022666.1 mouse_genomes_project 16 45389592 45399085 + Cfap44 protein_coding retained_intron MGP_NODShiLtJ_T0044206.1 MGP_NODShiLtJ_G0022666.1 mouse_genomes_project 16 45389595 45480685 + MGP_NODShiLtJ_P0044206 Cfap44 protein_coding protein_coding MGP_NODShiLtJ_T0044207.1 MGP_NODShiLtJ_G0022666.1 mouse_genomes_project 16 45389618 45396146 + Cfap44 protein_coding retained_intron MGP_NODShiLtJ_T0044208.1 MGP_NODShiLtJ_G0022666.1 mouse_genomes_project 16 45395572 45480351 + MGP_NODShiLtJ_P0044208 Cfap44 protein_coding protein_coding MGP_NODShiLtJ_T0044209.1 MGP_NODShiLtJ_G0022666.1 mouse_genomes_project 16 45402767 45426049 + Cfap44 protein_coding retained_intron MGP_NODShiLtJ_T0044210.1 MGP_NODShiLtJ_G0022666.1 mouse_genomes_project 16 45428032 45433211 + Cfap44 protein_coding processed_transcript MGP_NODShiLtJ_T0044211.1 MGP_NODShiLtJ_G0022666.1 mouse_genomes_project 16 45451688 45480351 + MGP_NODShiLtJ_P0044211 Cfap44 protein_coding protein_coding MGP_NODShiLtJ_T0044212.1 MGP_NODShiLtJ_G0022666.1 mouse_genomes_project 16 45469379 45480685 + Cfap44 protein_coding retained_intron MGP_NODShiLtJ_T0043130.1 MGP_NODShiLtJ_G0022409.1 mouse_genomes_project 16 15202584 15239381 + MGP_NODShiLtJ_P0043130 Crkl protein_coding protein_coding MGP_NODShiLtJ_T0043233.1 MGP_NODShiLtJ_G0022431.1 mouse_genomes_project 16 15855937 15879338 + MGP_NODShiLtJ_P0043233 Dgcr6 protein_coding protein_coding MGP_NODShiLtJ_T0043234.1 MGP_NODShiLtJ_G0022431.1 mouse_genomes_project 16 15855953 15859637 + Dgcr6 protein_coding processed_transcript MGP_NODShiLtJ_T0043235.1 MGP_NODShiLtJ_G0022431.1 mouse_genomes_project 16 15855969 15873787 + Dgcr6 protein_coding processed_transcript MGP_NODShiLtJ_T0043237.1 MGP_NODShiLtJ_G0022431.1 mouse_genomes_project 16 15872437 15879320 + MGP_NODShiLtJ_P0043237 Dgcr6 protein_coding protein_coding MGP_NODShiLtJ_T0043238.1 MGP_NODShiLtJ_G0022431.1 mouse_genomes_project 16 15873664 15878939 + MGP_NODShiLtJ_P0043238 Dgcr6 protein_coding protein_coding MGP_NODShiLtJ_T0043239.1 MGP_NODShiLtJ_G0022431.1 mouse_genomes_project 16 15873721 15879336 + MGP_NODShiLtJ_P0043239 Dgcr6 protein_coding protein_coding MGP_NODShiLtJ_T0043240.1 MGP_NODShiLtJ_G0022431.1 mouse_genomes_project 16 15873726 15879610 + MGP_NODShiLtJ_P0043240 Dgcr6 protein_coding protein_coding MGP_NODShiLtJ_T0043241.1 MGP_NODShiLtJ_G0022431.1 mouse_genomes_project 16 15877457 15879321 + Dgcr6 protein_coding processed_transcript MGP_NODShiLtJ_T0044274.1 MGP_NODShiLtJ_G0022682.1 mouse_genomes_project 16 46753771 46781651 - MGP_NODShiLtJ_P0044274 BC016579 protein_coding protein_coding MGP_NODShiLtJ_T0042811.1 MGP_NODShiLtJ_G0022336.1 mouse_genomes_project 16 7353655 7395055 - MGP_NODShiLtJ_P0042811 Tekt5 protein_coding protein_coding MGP_NODShiLtJ_T0042812.1 MGP_NODShiLtJ_G0022336.1 mouse_genomes_project 16 7356842 7395013 - MGP_NODShiLtJ_P0042812 Tekt5 protein_coding protein_coding MGP_NODShiLtJ_T0043591.1 MGP_NODShiLtJ_G0022509.1 mouse_genomes_project 16 21607737 21619391 + MGP_NODShiLtJ_P0043591 Adipoq protein_coding protein_coding MGP_NODShiLtJ_T0043592.1 MGP_NODShiLtJ_G0022509.1 mouse_genomes_project 16 21607847 21618655 + MGP_NODShiLtJ_P0043592 Adipoq protein_coding protein_coding MGP_NODShiLtJ_T0043624.1 MGP_NODShiLtJ_G0022522.1 mouse_genomes_project 16 25078556 25093688 - MGP_NODShiLtJ_P0043624 Cldn1 protein_coding protein_coding MGP_NODShiLtJ_T0100228.1 MGP_NODShiLtJ_G0038622.1 mouse_genomes_project 16 79408068 79408199 + Gm22797 snoRNA snoRNA MGP_NODShiLtJ_T0003641.1 MGP_NODShiLtJ_G0003289.1 mouse_genomes_project 16 109096967 109103354 + 1700093J21Rik antisense antisense MGP_NODShiLtJ_T0101077.1 MGP_NODShiLtJ_G0039434.1 mouse_genomes_project 16 107243249 107243607 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0044824.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104333965 104341133 - MGP_NODShiLtJ_P0044824 Donson protein_coding protein_coding MGP_NODShiLtJ_T0044825.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104335962 104345463 - Donson protein_coding retained_intron MGP_NODShiLtJ_T0044826.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104335962 104345463 - MGP_NODShiLtJ_P0044826 Donson protein_coding protein_coding MGP_NODShiLtJ_T0044827.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104335962 104345463 - MGP_NODShiLtJ_P0044827 Donson protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044828.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104336219 104345415 - MGP_NODShiLtJ_P0044828 Donson protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044829.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104336219 104344573 - MGP_NODShiLtJ_P0044829 Donson protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044830.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104336219 104344573 - MGP_NODShiLtJ_P0044830 Donson protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044831.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104336525 104345401 - MGP_NODShiLtJ_P0044831 Donson protein_coding protein_coding MGP_NODShiLtJ_T0044832.1 MGP_NODShiLtJ_G0022876.1 mouse_genomes_project 16 104336586 104347918 - MGP_NODShiLtJ_P0044832 Donson protein_coding protein_coding MGP_NODShiLtJ_T0010019.1 MGP_NODShiLtJ_G0008152.1 mouse_genomes_project 16 11138649 11138738 + Gm27734 miRNA miRNA MGP_NODShiLtJ_T0044405.1 MGP_NODShiLtJ_G0022718.1 mouse_genomes_project 16 60027438 60068442 - MGP_NODShiLtJ_P0044405 Tfg protein_coding protein_coding MGP_NODShiLtJ_T0044406.1 MGP_NODShiLtJ_G0022718.1 mouse_genomes_project 16 60027983 60056662 - MGP_NODShiLtJ_P0044406 Tfg protein_coding protein_coding MGP_NODShiLtJ_T0044407.1 MGP_NODShiLtJ_G0022718.1 mouse_genomes_project 16 60028074 60055345 - MGP_NODShiLtJ_P0044407 Tfg protein_coding protein_coding MGP_NODShiLtJ_T0044408.1 MGP_NODShiLtJ_G0022718.1 mouse_genomes_project 16 60053763 60068303 - MGP_NODShiLtJ_P0044408 Tfg protein_coding protein_coding MGP_NODShiLtJ_T0044409.1 MGP_NODShiLtJ_G0022718.1 mouse_genomes_project 16 60055330 60063968 - MGP_NODShiLtJ_P0044409 Tfg protein_coding protein_coding MGP_NODShiLtJ_T0044410.1 MGP_NODShiLtJ_G0022718.1 mouse_genomes_project 16 60055412 60068352 - MGP_NODShiLtJ_P0044410 Tfg protein_coding protein_coding MGP_NODShiLtJ_T0044411.1 MGP_NODShiLtJ_G0022718.1 mouse_genomes_project 16 60056578 60068174 - MGP_NODShiLtJ_P0044411 Tfg protein_coding protein_coding MGP_NODShiLtJ_T0042842.1 MGP_NODShiLtJ_G0022344.1 mouse_genomes_project 16 7825300 7825710 - MGP_NODShiLtJ_P0042842 Prm3 protein_coding protein_coding MGP_NODShiLtJ_T0042919.1 MGP_NODShiLtJ_G0022364.1 mouse_genomes_project 16 10963828 10970305 + MGP_NODShiLtJ_P0042919 3110001I22Rik protein_coding protein_coding MGP_NODShiLtJ_T0003638.1 MGP_NODShiLtJ_G0003286.1 mouse_genomes_project 16 104592284 104599205 + Gm15976 antisense antisense MGP_NODShiLtJ_T0042916.1 MGP_NODShiLtJ_G0022362.1 mouse_genomes_project 16 10798105 10960070 - MGP_NODShiLtJ_P0042916 Parn protein_coding protein_coding MGP_NODShiLtJ_T0003621.1 MGP_NODShiLtJ_G0003272.1 mouse_genomes_project 16 36177618 36199922 + Gm15845 antisense antisense MGP_NODShiLtJ_T0013057.1 MGP_NODShiLtJ_G0011165.1 mouse_genomes_project 16 51101375 51101912 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043137.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15264632 15282263 + MGP_NODShiLtJ_P0043137 Lztr1 protein_coding protein_coding MGP_NODShiLtJ_T0043138.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15264912 15282261 + MGP_NODShiLtJ_P0043138 Lztr1 protein_coding protein_coding MGP_NODShiLtJ_T0043139.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15264917 15280899 + Lztr1 protein_coding retained_intron MGP_NODShiLtJ_T0043140.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15264917 15268170 + Lztr1 protein_coding retained_intron MGP_NODShiLtJ_T0043141.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15265156 15271958 + Lztr1 protein_coding processed_transcript MGP_NODShiLtJ_T0043142.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15267006 15277095 + Lztr1 protein_coding processed_transcript MGP_NODShiLtJ_T0043143.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15271734 15275616 + Lztr1 protein_coding processed_transcript MGP_NODShiLtJ_T0043144.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15274169 15276614 + Lztr1 protein_coding retained_intron MGP_NODShiLtJ_T0043145.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15277003 15282261 + MGP_NODShiLtJ_P0043145 Lztr1 protein_coding protein_coding MGP_NODShiLtJ_T0043146.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15278728 15280303 + Lztr1 protein_coding retained_intron MGP_NODShiLtJ_T0043147.1 MGP_NODShiLtJ_G0022411.1 mouse_genomes_project 16 15280145 15281701 + Lztr1 protein_coding retained_intron MGP_NODShiLtJ_T0017384.1 MGP_NODShiLtJ_G0015196.1 mouse_genomes_project 16 103630502 103642493 + 4931406G06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0042930.1 MGP_NODShiLtJ_G0022367.1 mouse_genomes_project 16 11138668 11157988 + MGP_NODShiLtJ_P0042930 Ntan1 protein_coding protein_coding MGP_NODShiLtJ_T0042931.1 MGP_NODShiLtJ_G0022367.1 mouse_genomes_project 16 11138694 11152785 + Ntan1 protein_coding processed_transcript MGP_NODShiLtJ_T0042932.1 MGP_NODShiLtJ_G0022367.1 mouse_genomes_project 16 11138716 11152902 + Ntan1 protein_coding processed_transcript MGP_NODShiLtJ_T0042933.1 MGP_NODShiLtJ_G0022367.1 mouse_genomes_project 16 11138723 11157985 + Ntan1 protein_coding processed_transcript MGP_NODShiLtJ_T0042934.1 MGP_NODShiLtJ_G0022367.1 mouse_genomes_project 16 11138761 11147867 + Ntan1 protein_coding retained_intron MGP_NODShiLtJ_T0042935.1 MGP_NODShiLtJ_G0022367.1 mouse_genomes_project 16 11138773 11157084 + MGP_NODShiLtJ_P0042935 Ntan1 protein_coding protein_coding MGP_NODShiLtJ_T0042936.1 MGP_NODShiLtJ_G0022367.1 mouse_genomes_project 16 11151957 11153048 + Ntan1 protein_coding retained_intron MGP_NODShiLtJ_T0042939.1 MGP_NODShiLtJ_G0022367.1 mouse_genomes_project 16 11155851 11157703 + Ntan1 protein_coding retained_intron MGP_NODShiLtJ_T0045061.1 MGP_NODShiLtJ_G0022915.1 mouse_genomes_project 16 109475608 109496934 - MGP_NODShiLtJ_P0045061 Itgb2l protein_coding protein_coding MGP_NODShiLtJ_T0045062.1 MGP_NODShiLtJ_G0022915.1 mouse_genomes_project 16 109475612 109496929 - MGP_NODShiLtJ_P0045062 Itgb2l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045063.1 MGP_NODShiLtJ_G0022915.1 mouse_genomes_project 16 109475696 109496927 - MGP_NODShiLtJ_P0045063 Itgb2l protein_coding protein_coding MGP_NODShiLtJ_T0045064.1 MGP_NODShiLtJ_G0022915.1 mouse_genomes_project 16 109480050 109482465 - Itgb2l protein_coding processed_transcript MGP_NODShiLtJ_T0013039.1 MGP_NODShiLtJ_G0011147.1 mouse_genomes_project 16 32173442 32174382 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100226.1 MGP_NODShiLtJ_G0038620.1 mouse_genomes_project 16 70663274 70663404 - Gm22429 snoRNA snoRNA MGP_NODShiLtJ_T0044421.1 MGP_NODShiLtJ_G0022725.1 mouse_genomes_project 16 60668781 60697983 - MGP_NODShiLtJ_P0044421 Tmem30c protein_coding protein_coding MGP_NODShiLtJ_T0044422.1 MGP_NODShiLtJ_G0022725.1 mouse_genomes_project 16 60669057 60697969 - MGP_NODShiLtJ_P0044422 Tmem30c protein_coding protein_coding MGP_NODShiLtJ_T0044423.1 MGP_NODShiLtJ_G0022725.1 mouse_genomes_project 16 60671939 60697969 - MGP_NODShiLtJ_P0044423 Tmem30c protein_coding protein_coding MGP_NODShiLtJ_T0043941.1 MGP_NODShiLtJ_G0022599.1 mouse_genomes_project 16 35460220 35535999 - MGP_NODShiLtJ_P0043941 Dirc2 protein_coding protein_coding MGP_NODShiLtJ_T0043942.1 MGP_NODShiLtJ_G0022599.1 mouse_genomes_project 16 35463706 35535973 - MGP_NODShiLtJ_P0043942 Dirc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098943.1 MGP_NODShiLtJ_G0037337.1 mouse_genomes_project 16 20535198 20535306 + Gm25810 snRNA snRNA MGP_NODShiLtJ_T0044269.1 MGP_NODShiLtJ_G0022680.1 mouse_genomes_project 16 46661478 46733120 + MGP_NODShiLtJ_P0044269 Slc9c1 protein_coding protein_coding MGP_NODShiLtJ_T0044270.1 MGP_NODShiLtJ_G0022680.1 mouse_genomes_project 16 46665832 46733005 + MGP_NODShiLtJ_P0044270 Slc9c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044271.1 MGP_NODShiLtJ_G0022680.1 mouse_genomes_project 16 46665832 46733005 + MGP_NODShiLtJ_P0044271 Slc9c1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044527.1 MGP_NODShiLtJ_G0022767.1 mouse_genomes_project 16 69837196 69838532 - MGP_NODShiLtJ_P0044527 Csnka2ip protein_coding protein_coding MGP_NODShiLtJ_T0044673.1 MGP_NODShiLtJ_G0022815.1 mouse_genomes_project 16 100801236 100802117 - MGP_NODShiLtJ_P0044673 2310079G19Rik protein_coding protein_coding MGP_NODShiLtJ_T0043708.1 MGP_NODShiLtJ_G0022546.1 mouse_genomes_project 16 30407043 30517935 - MGP_NODShiLtJ_P0043708 Acap2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010050.1 MGP_NODShiLtJ_G0008183.1 mouse_genomes_project 16 52681215 52681329 + Mir6363 miRNA miRNA MGP_NODShiLtJ_T0043825.1 MGP_NODShiLtJ_G0022574.1 mouse_genomes_project 16 32227152 32250017 - MGP_NODShiLtJ_P0043825 Muc20 protein_coding protein_coding MGP_NODShiLtJ_T0043828.1 MGP_NODShiLtJ_G0022574.1 mouse_genomes_project 16 32236772 32250017 - MGP_NODShiLtJ_P0043828 Muc20 protein_coding protein_coding MGP_NODShiLtJ_T0043236.1 MGP_NODShiLtJ_G0022432.1 mouse_genomes_project 16 15864414 15898361 - MGP_NODShiLtJ_P0043236 Prodh protein_coding protein_coding MGP_NODShiLtJ_T0043242.1 MGP_NODShiLtJ_G0022432.1 mouse_genomes_project 16 15879699 15898355 - MGP_NODShiLtJ_P0043242 Prodh protein_coding protein_coding MGP_NODShiLtJ_T0043243.1 MGP_NODShiLtJ_G0022432.1 mouse_genomes_project 16 15880103 15888466 - MGP_NODShiLtJ_P0043243 Prodh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043244.1 MGP_NODShiLtJ_G0022432.1 mouse_genomes_project 16 15880233 15889140 - MGP_NODShiLtJ_P0043244 Prodh protein_coding protein_coding MGP_NODShiLtJ_T0043245.1 MGP_NODShiLtJ_G0022432.1 mouse_genomes_project 16 15890209 15891517 - Prodh protein_coding processed_transcript MGP_NODShiLtJ_T0043246.1 MGP_NODShiLtJ_G0022432.1 mouse_genomes_project 16 15893401 15898220 - MGP_NODShiLtJ_P0043246 Prodh protein_coding protein_coding MGP_NODShiLtJ_T0003634.1 MGP_NODShiLtJ_G0003283.1 mouse_genomes_project 16 64674227 64697709 + antisense antisense MGP_NODShiLtJ_T0044677.1 MGP_NODShiLtJ_G0022819.1 mouse_genomes_project 16 100920023 100920771 + MGP_NODShiLtJ_P0044677 Krtap13-1 protein_coding protein_coding MGP_NODShiLtJ_T0044601.1 MGP_NODShiLtJ_G0022795.1 mouse_genomes_project 16 91387721 91943348 + MGP_NODShiLtJ_P0044601 Ncam2 protein_coding protein_coding MGP_NODShiLtJ_T0044602.1 MGP_NODShiLtJ_G0022795.1 mouse_genomes_project 16 91387938 91999079 + MGP_NODShiLtJ_P0044602 Ncam2 protein_coding protein_coding MGP_NODShiLtJ_T0042700.1 MGP_NODShiLtJ_G0022303.1 mouse_genomes_project 16 1288895 1314622 - MGP_NODShiLtJ_P0042700 Cdip1 protein_coding protein_coding MGP_NODShiLtJ_T0042701.1 MGP_NODShiLtJ_G0022303.1 mouse_genomes_project 16 1290275 1294861 - Cdip1 protein_coding retained_intron MGP_NODShiLtJ_T0042702.1 MGP_NODShiLtJ_G0022303.1 mouse_genomes_project 16 1290275 1314924 - MGP_NODShiLtJ_P0042702 Cdip1 protein_coding protein_coding MGP_NODShiLtJ_T0042703.1 MGP_NODShiLtJ_G0022303.1 mouse_genomes_project 16 1290773 1314562 - MGP_NODShiLtJ_P0042703 Cdip1 protein_coding protein_coding MGP_NODShiLtJ_T0042704.1 MGP_NODShiLtJ_G0022303.1 mouse_genomes_project 16 1292743 1314898 - Cdip1 protein_coding retained_intron MGP_NODShiLtJ_T0006809.1 MGP_NODShiLtJ_G0005606.1 mouse_genomes_project 16 86074140 86083303 - lincRNA lincRNA MGP_NODShiLtJ_T0006810.1 MGP_NODShiLtJ_G0005606.1 mouse_genomes_project 16 86078803 86083309 - lincRNA lincRNA MGP_NODShiLtJ_T0044919.1 MGP_NODShiLtJ_G0022894.1 mouse_genomes_project 16 106741043 106763173 + MGP_NODShiLtJ_P0044919 Chaf1b protein_coding protein_coding MGP_NODShiLtJ_T0044920.1 MGP_NODShiLtJ_G0022894.1 mouse_genomes_project 16 106741066 106763135 + MGP_NODShiLtJ_P0044920 Chaf1b protein_coding protein_coding MGP_NODShiLtJ_T0044921.1 MGP_NODShiLtJ_G0022894.1 mouse_genomes_project 16 106741073 106751429 + Chaf1b protein_coding retained_intron MGP_NODShiLtJ_T0044922.1 MGP_NODShiLtJ_G0022894.1 mouse_genomes_project 16 106741158 106742614 + MGP_NODShiLtJ_P0044922 Chaf1b protein_coding protein_coding MGP_NODShiLtJ_T0044923.1 MGP_NODShiLtJ_G0022894.1 mouse_genomes_project 16 106741344 106744295 + MGP_NODShiLtJ_P0044923 Chaf1b protein_coding protein_coding MGP_NODShiLtJ_T0044924.1 MGP_NODShiLtJ_G0022894.1 mouse_genomes_project 16 106743852 106749930 + Chaf1b protein_coding processed_transcript MGP_NODShiLtJ_T0044925.1 MGP_NODShiLtJ_G0022894.1 mouse_genomes_project 16 106749881 106757186 + Chaf1b protein_coding retained_intron MGP_NODShiLtJ_T0044926.1 MGP_NODShiLtJ_G0022894.1 mouse_genomes_project 16 106761749 106763168 + Chaf1b protein_coding retained_intron MGP_NODShiLtJ_T0044781.1 MGP_NODShiLtJ_G0022866.1 mouse_genomes_project 16 103881540 103883702 + MGP_NODShiLtJ_P0044781 Olig1 protein_coding protein_coding MGP_NODShiLtJ_T0100232.1 MGP_NODShiLtJ_G0038626.1 mouse_genomes_project 16 87619332 87619463 + Gm25916 snoRNA snoRNA MGP_NODShiLtJ_T0013067.1 MGP_NODShiLtJ_G0011175.1 mouse_genomes_project 16 65879726 65880237 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042641.1 MGP_NODShiLtJ_G0022291.1 mouse_genomes_project 16 494045 543550 - MGP_NODShiLtJ_P0042641 Trap1 protein_coding protein_coding MGP_NODShiLtJ_T0042642.1 MGP_NODShiLtJ_G0022291.1 mouse_genomes_project 16 494214 498773 - Trap1 protein_coding processed_transcript MGP_NODShiLtJ_T0042643.1 MGP_NODShiLtJ_G0022291.1 mouse_genomes_project 16 517241 543498 - MGP_NODShiLtJ_P0042643 Trap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042644.1 MGP_NODShiLtJ_G0022291.1 mouse_genomes_project 16 531349 543550 - Trap1 protein_coding retained_intron MGP_NODShiLtJ_T0100216.1 MGP_NODShiLtJ_G0038610.1 mouse_genomes_project 16 47378534 47378666 + Gm26297 snoRNA snoRNA MGP_NODShiLtJ_T0098150.1 MGP_NODShiLtJ_G0036562.1 mouse_genomes_project 16 32678839 32679238 - Gm23916 ribozyme ribozyme MGP_NODShiLtJ_T0044315.1 MGP_NODShiLtJ_G0022694.1 mouse_genomes_project 16 50389428 50430703 - MGP_NODShiLtJ_P0044315 Trat1 protein_coding protein_coding MGP_NODShiLtJ_T0042849.1 MGP_NODShiLtJ_G0022349.1 mouse_genomes_project 16 8007590 8041395 - MGP_NODShiLtJ_P0042849 Litaf protein_coding protein_coding MGP_NODShiLtJ_T0042850.1 MGP_NODShiLtJ_G0022349.1 mouse_genomes_project 16 8009139 8024025 - MGP_NODShiLtJ_P0042850 Litaf protein_coding protein_coding MGP_NODShiLtJ_T0042851.1 MGP_NODShiLtJ_G0022349.1 mouse_genomes_project 16 8011658 8120075 - MGP_NODShiLtJ_P0042851 Litaf protein_coding protein_coding MGP_NODShiLtJ_T0042852.1 MGP_NODShiLtJ_G0022349.1 mouse_genomes_project 16 8014646 8041345 - Litaf protein_coding retained_intron MGP_NODShiLtJ_T0013001.1 MGP_NODShiLtJ_G0011109.1 mouse_genomes_project 16 7836185 7837449 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013044.1 MGP_NODShiLtJ_G0011152.1 mouse_genomes_project 16 38905005 38906586 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043550.1 MGP_NODShiLtJ_G0022501.1 mouse_genomes_project 16 21193231 21239761 - MGP_NODShiLtJ_P0043550 Tbccd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013062.1 MGP_NODShiLtJ_G0011170.1 mouse_genomes_project 16 60112465 60113102 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043977.1 MGP_NODShiLtJ_G0022613.1 mouse_genomes_project 16 36046535 36054851 + MGP_NODShiLtJ_P0043977 Gm5416 protein_coding protein_coding MGP_NODShiLtJ_T0043594.1 MGP_NODShiLtJ_G0022511.1 mouse_genomes_project 16 21696006 21845107 + MGP_NODShiLtJ_P0043594 St6gal1 protein_coding protein_coding MGP_NODShiLtJ_T0043595.1 MGP_NODShiLtJ_G0022511.1 mouse_genomes_project 16 21697287 21803869 + St6gal1 protein_coding processed_transcript MGP_NODShiLtJ_T0043596.1 MGP_NODShiLtJ_G0022511.1 mouse_genomes_project 16 21697287 21845109 + MGP_NODShiLtJ_P0043596 St6gal1 protein_coding protein_coding MGP_NODShiLtJ_T0043597.1 MGP_NODShiLtJ_G0022511.1 mouse_genomes_project 16 21746518 21803977 + MGP_NODShiLtJ_P0043597 St6gal1 protein_coding protein_coding MGP_NODShiLtJ_T0043598.1 MGP_NODShiLtJ_G0022511.1 mouse_genomes_project 16 21771083 21843354 + MGP_NODShiLtJ_P0043598 St6gal1 protein_coding protein_coding MGP_NODShiLtJ_T0043599.1 MGP_NODShiLtJ_G0022511.1 mouse_genomes_project 16 21843074 21845107 + St6gal1 protein_coding processed_transcript MGP_NODShiLtJ_T0043839.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32343469 32368610 + Fyttd1 protein_coding processed_transcript MGP_NODShiLtJ_T0043840.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32343750 32386042 + MGP_NODShiLtJ_P0043840 Fyttd1 protein_coding protein_coding MGP_NODShiLtJ_T0043841.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32343753 32386130 + MGP_NODShiLtJ_P0043841 Fyttd1 protein_coding protein_coding MGP_NODShiLtJ_T0043842.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32343782 32372427 + Fyttd1 protein_coding retained_intron MGP_NODShiLtJ_T0043843.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32343782 32374431 + Fyttd1 protein_coding processed_transcript MGP_NODShiLtJ_T0043844.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32343820 32376032 + Fyttd1 protein_coding retained_intron MGP_NODShiLtJ_T0043845.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32348938 32382761 + MGP_NODShiLtJ_P0043845 Fyttd1 protein_coding protein_coding MGP_NODShiLtJ_T0043846.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32372261 32382910 + Fyttd1 protein_coding processed_transcript MGP_NODShiLtJ_T0043847.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32375930 32382833 + Fyttd1 protein_coding retained_intron MGP_NODShiLtJ_T0043848.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32377404 32382769 + Fyttd1 protein_coding retained_intron MGP_NODShiLtJ_T0043849.1 MGP_NODShiLtJ_G0022577.1 mouse_genomes_project 16 32379279 32382735 + Fyttd1 protein_coding retained_intron MGP_NODShiLtJ_T0044069.1 MGP_NODShiLtJ_G0022633.1 mouse_genomes_project 16 37970804 37989411 + MGP_NODShiLtJ_P0044069 Lrrc58 protein_coding protein_coding MGP_NODShiLtJ_T0098941.1 MGP_NODShiLtJ_G0037335.1 mouse_genomes_project 16 18869652 18869817 + Gm22741 snRNA snRNA MGP_NODShiLtJ_T0044314.1 MGP_NODShiLtJ_G0022693.1 mouse_genomes_project 16 50065937 50281138 + MGP_NODShiLtJ_P0044314 Morc1 protein_coding protein_coding MGP_NODShiLtJ_T0044531.1 MGP_NODShiLtJ_G0022770.1 mouse_genomes_project 16 70299851 70307380 + MGP_NODShiLtJ_P0044531 Cggbp1 protein_coding protein_coding MGP_NODShiLtJ_T0044532.1 MGP_NODShiLtJ_G0022770.1 mouse_genomes_project 16 70300574 70303859 + Cggbp1 protein_coding retained_intron MGP_NODShiLtJ_T0044155.1 MGP_NODShiLtJ_G0022656.1 mouse_genomes_project 16 44693208 44768885 + MGP_NODShiLtJ_P0044155 Drd3 protein_coding protein_coding MGP_NODShiLtJ_T0042661.1 MGP_NODShiLtJ_G0022295.1 mouse_genomes_project 16 1044982 1063112 - MGP_NODShiLtJ_P0042661 Tfap4 protein_coding protein_coding MGP_NODShiLtJ_T0044934.1 MGP_NODShiLtJ_G0022898.1 mouse_genomes_project 16 107212163 107220191 + MGP_NODShiLtJ_P0044934 Ripply3 protein_coding protein_coding MGP_NODShiLtJ_T0043411.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18650605 18661910 + MGP_NODShiLtJ_P0043411 protein_coding protein_coding MGP_NODShiLtJ_T0043412.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18650607 18662763 + MGP_NODShiLtJ_P0043412 protein_coding protein_coding MGP_NODShiLtJ_T0043413.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18650676 18652967 + protein_coding retained_intron MGP_NODShiLtJ_T0043414.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18655104 18657603 + protein_coding processed_transcript MGP_NODShiLtJ_T0043415.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18655750 18657304 + protein_coding retained_intron MGP_NODShiLtJ_T0043416.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18655880 18657179 + protein_coding retained_intron MGP_NODShiLtJ_T0043417.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18656074 18665780 + MGP_NODShiLtJ_P0043417 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043418.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18656100 18656877 + protein_coding retained_intron MGP_NODShiLtJ_T0043419.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18657211 18661625 + protein_coding retained_intron MGP_NODShiLtJ_T0043420.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18657405 18658145 + protein_coding retained_intron MGP_NODShiLtJ_T0043421.1 MGP_NODShiLtJ_G0022474.1 mouse_genomes_project 16 18657953 18661592 + protein_coding retained_intron MGP_NODShiLtJ_T0000150.1 MGP_NODShiLtJ_G0000110.1 mouse_genomes_project 16 17200678 17201137 - MGP_NODShiLtJ_P0000150 Iglv2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0000151.1 MGP_NODShiLtJ_G0000110.1 mouse_genomes_project 16 17200678 17201122 - MGP_NODShiLtJ_P0000151 Iglv2 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0097772.1 MGP_NODShiLtJ_G0036184.1 mouse_genomes_project 16 51773401 51775212 + pseudogene pseudogene MGP_NODShiLtJ_T0043861.1 MGP_NODShiLtJ_G0022579.1 mouse_genomes_project 16 32508977 32585998 - MGP_NODShiLtJ_P0043861 Iqcg protein_coding protein_coding MGP_NODShiLtJ_T0043862.1 MGP_NODShiLtJ_G0022579.1 mouse_genomes_project 16 32510559 32518497 - Iqcg protein_coding processed_transcript MGP_NODShiLtJ_T0043863.1 MGP_NODShiLtJ_G0022579.1 mouse_genomes_project 16 32541154 32586026 - MGP_NODShiLtJ_P0043863 Iqcg protein_coding protein_coding MGP_NODShiLtJ_T0043864.1 MGP_NODShiLtJ_G0022579.1 mouse_genomes_project 16 32553435 32585993 - Iqcg protein_coding retained_intron MGP_NODShiLtJ_T0100215.1 MGP_NODShiLtJ_G0038609.1 mouse_genomes_project 16 44836413 44836546 - Gm25989 snoRNA snoRNA MGP_NODShiLtJ_T0042657.1 MGP_NODShiLtJ_G0022294.1 mouse_genomes_project 16 967267 1017644 - MGP_NODShiLtJ_P0042657 Srl protein_coding protein_coding MGP_NODShiLtJ_T0042658.1 MGP_NODShiLtJ_G0022294.1 mouse_genomes_project 16 967279 1017644 - MGP_NODShiLtJ_P0042658 Srl protein_coding protein_coding MGP_NODShiLtJ_T0042659.1 MGP_NODShiLtJ_G0022294.1 mouse_genomes_project 16 974980 1042298 - Srl protein_coding processed_transcript MGP_NODShiLtJ_T0042660.1 MGP_NODShiLtJ_G0022294.1 mouse_genomes_project 16 980980 1017632 - Srl protein_coding retained_intron MGP_NODShiLtJ_T0044793.1 MGP_NODShiLtJ_G0022870.1 mouse_genomes_project 16 104121605 104144280 + MGP_NODShiLtJ_P0044793 Ifnar1 protein_coding protein_coding MGP_NODShiLtJ_T0044794.1 MGP_NODShiLtJ_G0022870.1 mouse_genomes_project 16 104121616 104144276 + MGP_NODShiLtJ_P0044794 Ifnar1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044795.1 MGP_NODShiLtJ_G0022870.1 mouse_genomes_project 16 104121631 104144280 + MGP_NODShiLtJ_P0044795 Ifnar1 protein_coding protein_coding MGP_NODShiLtJ_T0044796.1 MGP_NODShiLtJ_G0022870.1 mouse_genomes_project 16 104121644 104128155 + Ifnar1 protein_coding retained_intron MGP_NODShiLtJ_T0044797.1 MGP_NODShiLtJ_G0022870.1 mouse_genomes_project 16 104121703 104132487 + MGP_NODShiLtJ_P0044797 Ifnar1 protein_coding protein_coding MGP_NODShiLtJ_T0043776.1 MGP_NODShiLtJ_G0022560.1 mouse_genomes_project 16 31581799 31583030 + MGP_NODShiLtJ_P0043776 Bex6 protein_coding protein_coding MGP_NODShiLtJ_T0010029.1 MGP_NODShiLtJ_G0008162.1 mouse_genomes_project 16 17268770 17268880 + Gm23612 miRNA miRNA MGP_NODShiLtJ_T0098959.1 MGP_NODShiLtJ_G0037353.1 mouse_genomes_project 16 36265558 36265661 + Gm25903 snRNA snRNA MGP_NODShiLtJ_T0003598.1 MGP_NODShiLtJ_G0003254.1 mouse_genomes_project 16 11028899 11037503 + Pla2g10os antisense antisense MGP_NODShiLtJ_T0010035.1 MGP_NODShiLtJ_G0008168.1 mouse_genomes_project 16 21564451 21564557 + miRNA miRNA MGP_NODShiLtJ_T0045076.1 MGP_NODShiLtJ_G0022922.1 mouse_genomes_project 16 110882699 110904405 - MGP_NODShiLtJ_P0045076 Ripk4 protein_coding protein_coding MGP_NODShiLtJ_T0045068.1 MGP_NODShiLtJ_G0022919.1 mouse_genomes_project 16 110548249 110566562 - MGP_NODShiLtJ_P0045068 Mx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045069.1 MGP_NODShiLtJ_G0022919.1 mouse_genomes_project 16 110548251 110566560 - MGP_NODShiLtJ_P0045069 Mx1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045070.1 MGP_NODShiLtJ_G0022919.1 mouse_genomes_project 16 110548251 110566561 - MGP_NODShiLtJ_P0045070 Mx1 protein_coding protein_coding MGP_NODShiLtJ_T0045071.1 MGP_NODShiLtJ_G0022919.1 mouse_genomes_project 16 110548251 110566561 - MGP_NODShiLtJ_P0045071 Mx1 protein_coding protein_coding MGP_NODShiLtJ_T0045072.1 MGP_NODShiLtJ_G0022919.1 mouse_genomes_project 16 110558840 110566560 - MGP_NODShiLtJ_P0045072 Mx1 protein_coding protein_coding MGP_NODShiLtJ_T0042829.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7569719 7777655 + MGP_NODShiLtJ_P0042829 Clec16a protein_coding protein_coding MGP_NODShiLtJ_T0042830.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7569719 7777655 + MGP_NODShiLtJ_P0042830 Clec16a protein_coding protein_coding MGP_NODShiLtJ_T0042831.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7569744 7777655 + MGP_NODShiLtJ_P0042831 Clec16a protein_coding protein_coding MGP_NODShiLtJ_T0042832.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7569757 7588828 + Clec16a protein_coding processed_transcript MGP_NODShiLtJ_T0042833.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7569778 7751715 + MGP_NODShiLtJ_P0042833 Clec16a protein_coding protein_coding MGP_NODShiLtJ_T0042834.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7569789 7723437 + MGP_NODShiLtJ_P0042834 Clec16a protein_coding protein_coding MGP_NODShiLtJ_T0042835.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7569789 7584119 + MGP_NODShiLtJ_P0042835 Clec16a protein_coding protein_coding MGP_NODShiLtJ_T0042836.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7569789 7772753 + MGP_NODShiLtJ_P0042836 Clec16a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042837.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7626717 7773394 + MGP_NODShiLtJ_P0042837 Clec16a protein_coding protein_coding MGP_NODShiLtJ_T0042838.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7636887 7657512 + Clec16a protein_coding processed_transcript MGP_NODShiLtJ_T0042839.1 MGP_NODShiLtJ_G0022341.1 mouse_genomes_project 16 7656770 7666322 + Clec16a protein_coding processed_transcript MGP_NODShiLtJ_T0044927.1 MGP_NODShiLtJ_G0022895.1 mouse_genomes_project 16 106777390 106792680 - MGP_NODShiLtJ_P0044927 Cldn14 protein_coding protein_coding MGP_NODShiLtJ_T0044928.1 MGP_NODShiLtJ_G0022895.1 mouse_genomes_project 16 106777390 106792430 - MGP_NODShiLtJ_P0044928 Cldn14 protein_coding protein_coding MGP_NODShiLtJ_T0044929.1 MGP_NODShiLtJ_G0022895.1 mouse_genomes_project 16 106777391 106874203 - MGP_NODShiLtJ_P0044929 Cldn14 protein_coding protein_coding MGP_NODShiLtJ_T0044930.1 MGP_NODShiLtJ_G0022895.1 mouse_genomes_project 16 106778108 106792430 - Cldn14 protein_coding processed_transcript MGP_NODShiLtJ_T0044931.1 MGP_NODShiLtJ_G0022895.1 mouse_genomes_project 16 106778166 106792680 - Cldn14 protein_coding processed_transcript MGP_NODShiLtJ_T0043529.1 MGP_NODShiLtJ_G0022496.1 mouse_genomes_project 16 20353058 20465486 - Igf2bp2 protein_coding retained_intron MGP_NODShiLtJ_T0043530.1 MGP_NODShiLtJ_G0022496.1 mouse_genomes_project 16 20353073 20383147 - Igf2bp2 protein_coding retained_intron MGP_NODShiLtJ_T0043531.1 MGP_NODShiLtJ_G0022496.1 mouse_genomes_project 16 20354792 20465430 - MGP_NODShiLtJ_P0043531 Igf2bp2 protein_coding protein_coding MGP_NODShiLtJ_T0043532.1 MGP_NODShiLtJ_G0022496.1 mouse_genomes_project 16 20355365 20357697 - Igf2bp2 protein_coding retained_intron MGP_NODShiLtJ_T0043533.1 MGP_NODShiLtJ_G0022496.1 mouse_genomes_project 16 20370055 20373156 - Igf2bp2 protein_coding retained_intron MGP_NODShiLtJ_T0043534.1 MGP_NODShiLtJ_G0022496.1 mouse_genomes_project 16 20377976 20436325 - Igf2bp2 protein_coding processed_transcript MGP_NODShiLtJ_T0043535.1 MGP_NODShiLtJ_G0022496.1 mouse_genomes_project 16 20451771 20465459 - Igf2bp2 protein_coding processed_transcript MGP_NODShiLtJ_T0043536.1 MGP_NODShiLtJ_G0022496.1 mouse_genomes_project 16 20463347 20465442 - Igf2bp2 protein_coding retained_intron MGP_NODShiLtJ_T0044620.1 MGP_NODShiLtJ_G0022799.1 mouse_genomes_project 16 96409166 96436432 + MGP_NODShiLtJ_P0044620 Gabpa protein_coding protein_coding MGP_NODShiLtJ_T0044621.1 MGP_NODShiLtJ_G0022799.1 mouse_genomes_project 16 96409365 96439635 + MGP_NODShiLtJ_P0044621 Gabpa protein_coding protein_coding MGP_NODShiLtJ_T0044622.1 MGP_NODShiLtJ_G0022799.1 mouse_genomes_project 16 96427672 96435546 + Gabpa protein_coding processed_transcript MGP_NODShiLtJ_T0044623.1 MGP_NODShiLtJ_G0022799.1 mouse_genomes_project 16 96431150 96432689 + Gabpa protein_coding retained_intron MGP_NODShiLtJ_T0044624.1 MGP_NODShiLtJ_G0022799.1 mouse_genomes_project 16 96435161 96438422 + Gabpa protein_coding processed_transcript MGP_NODShiLtJ_T0010012.1 MGP_NODShiLtJ_G0008145.1 mouse_genomes_project 16 5436594 5436702 - Gm26445 miRNA miRNA MGP_NODShiLtJ_T0044637.1 MGP_NODShiLtJ_G0022805.1 mouse_genomes_project 16 99405992 99470428 - MGP_NODShiLtJ_P0044637 Ltn1 protein_coding protein_coding MGP_NODShiLtJ_T0044593.1 MGP_NODShiLtJ_G0022792.1 mouse_genomes_project 16 87928736 87954434 - MGP_NODShiLtJ_P0044593 D16Ertd472e protein_coding protein_coding MGP_NODShiLtJ_T0044594.1 MGP_NODShiLtJ_G0022792.1 mouse_genomes_project 16 87929413 87954434 - MGP_NODShiLtJ_P0044594 D16Ertd472e protein_coding protein_coding MGP_NODShiLtJ_T0044595.1 MGP_NODShiLtJ_G0022792.1 mouse_genomes_project 16 87929707 87954434 - MGP_NODShiLtJ_P0044595 D16Ertd472e protein_coding protein_coding MGP_NODShiLtJ_T0000940.1 MGP_NODShiLtJ_G0000868.1 mouse_genomes_project 16 85092393 85094115 + TEC TEC MGP_NODShiLtJ_T0044879.1 MGP_NODShiLtJ_G0022881.1 mouse_genomes_project 16 104749956 104780465 + MGP_NODShiLtJ_P0044879 Slc5a3 protein_coding protein_coding MGP_NODShiLtJ_T0044880.1 MGP_NODShiLtJ_G0022881.1 mouse_genomes_project 16 104771016 104776800 + MGP_NODShiLtJ_P0044880 Slc5a3 protein_coding protein_coding MGP_NODShiLtJ_T0000949.1 MGP_NODShiLtJ_G0000876.1 mouse_genomes_project 16 86743982 86746345 + TEC TEC MGP_NODShiLtJ_T0101675.1 MGP_NODShiLtJ_G0039844.1 mouse_genomes_project 16 14316295 14316416 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0042719.1 MGP_NODShiLtJ_G0022310.1 mouse_genomes_project 16 1530879 1541778 - MGP_NODShiLtJ_P0042719 Sept12 protein_coding protein_coding MGP_NODShiLtJ_T0043427.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18707511 18716491 + MGP_NODShiLtJ_P0043427 Vwa5b2 protein_coding protein_coding MGP_NODShiLtJ_T0043428.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18707574 18723335 + MGP_NODShiLtJ_P0043428 Vwa5b2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043429.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18707622 18708777 + Vwa5b2 protein_coding processed_transcript MGP_NODShiLtJ_T0043430.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18707622 18723329 + MGP_NODShiLtJ_P0043430 Vwa5b2 protein_coding protein_coding MGP_NODShiLtJ_T0043431.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18707624 18709227 + Vwa5b2 protein_coding processed_transcript MGP_NODShiLtJ_T0043432.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18707891 18709261 + Vwa5b2 protein_coding retained_intron MGP_NODShiLtJ_T0043433.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18708099 18708572 + Vwa5b2 protein_coding retained_intron MGP_NODShiLtJ_T0043434.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18708130 18710430 + Vwa5b2 protein_coding retained_intron MGP_NODShiLtJ_T0043435.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18708186 18716486 + MGP_NODShiLtJ_P0043435 Vwa5b2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043436.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18709196 18723326 + MGP_NODShiLtJ_P0043436 Vwa5b2 protein_coding protein_coding MGP_NODShiLtJ_T0043437.1 MGP_NODShiLtJ_G0022476.1 mouse_genomes_project 16 18720722 18723329 + Vwa5b2 protein_coding retained_intron MGP_NODShiLtJ_T0013024.1 MGP_NODShiLtJ_G0011132.1 mouse_genomes_project 16 18663771 18664054 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000955.1 MGP_NODShiLtJ_G0000882.1 mouse_genomes_project 16 103874035 103874836 + TEC TEC MGP_NODShiLtJ_T0098939.1 MGP_NODShiLtJ_G0037333.1 mouse_genomes_project 16 15236208 15236275 - Gm22770 snRNA snRNA MGP_NODShiLtJ_T0100214.1 MGP_NODShiLtJ_G0038608.1 mouse_genomes_project 16 44779794 44779923 - Gm26074 snoRNA snoRNA MGP_NODShiLtJ_T0013025.1 MGP_NODShiLtJ_G0011133.1 mouse_genomes_project 16 18786045 18786537 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000954.1 MGP_NODShiLtJ_G0000881.1 mouse_genomes_project 16 89280309 89280934 + TEC TEC MGP_NODShiLtJ_T0100230.1 MGP_NODShiLtJ_G0038624.1 mouse_genomes_project 16 83134114 83134260 + Gm26307 snoRNA snoRNA MGP_NODShiLtJ_T0043880.1 MGP_NODShiLtJ_G0022585.1 mouse_genomes_project 16 33113214 33268823 + MGP_NODShiLtJ_P0043880 Slc12a8 protein_coding protein_coding MGP_NODShiLtJ_T0043881.1 MGP_NODShiLtJ_G0022585.1 mouse_genomes_project 16 33195022 33268817 + MGP_NODShiLtJ_P0043881 Slc12a8 protein_coding protein_coding MGP_NODShiLtJ_T0043882.1 MGP_NODShiLtJ_G0022585.1 mouse_genomes_project 16 33215523 33225887 + Slc12a8 protein_coding processed_transcript MGP_NODShiLtJ_T0013056.1 MGP_NODShiLtJ_G0011164.1 mouse_genomes_project 16 51101375 51102317 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044603.1 MGP_NODShiLtJ_G0022796.1 mouse_genomes_project 16 96264601 96285936 - MGP_NODShiLtJ_P0044603 Mrpl39 protein_coding protein_coding MGP_NODShiLtJ_T0044604.1 MGP_NODShiLtJ_G0022796.1 mouse_genomes_project 16 96284361 96285424 - Mrpl39 protein_coding processed_transcript MGP_NODShiLtJ_T0042992.1 MGP_NODShiLtJ_G0022382.1 mouse_genomes_project 16 13096702 13111238 - MGP_NODShiLtJ_P0042992 Mcm4 protein_coding protein_coding MGP_NODShiLtJ_T0043737.1 MGP_NODShiLtJ_G0022551.1 mouse_genomes_project 16 31246907 31267116 + MGP_NODShiLtJ_P0043737 Mfi2 protein_coding protein_coding MGP_NODShiLtJ_T0043545.1 MGP_NODShiLtJ_G0022499.1 mouse_genomes_project 16 20828584 21028636 - MGP_NODShiLtJ_P0043545 Dgkg protein_coding protein_coding MGP_NODShiLtJ_T0043546.1 MGP_NODShiLtJ_G0022499.1 mouse_genomes_project 16 20829345 21028684 - MGP_NODShiLtJ_P0043546 Dgkg protein_coding protein_coding MGP_NODShiLtJ_T0043547.1 MGP_NODShiLtJ_G0022499.1 mouse_genomes_project 16 20912439 21028651 - MGP_NODShiLtJ_P0043547 Dgkg protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043548.1 MGP_NODShiLtJ_G0022499.1 mouse_genomes_project 16 20961411 21028491 - Dgkg protein_coding processed_transcript MGP_NODShiLtJ_T0043604.1 MGP_NODShiLtJ_G0022515.1 mouse_genomes_project 16 22410710 22411974 - MGP_NODShiLtJ_P0043604 Sst protein_coding protein_coding MGP_NODShiLtJ_T0042912.1 MGP_NODShiLtJ_G0022361.1 mouse_genomes_project 16 10481091 10670182 + MGP_NODShiLtJ_P0042912 Mkl2 protein_coding protein_coding MGP_NODShiLtJ_T0042913.1 MGP_NODShiLtJ_G0022361.1 mouse_genomes_project 16 10481116 10581255 + MGP_NODShiLtJ_P0042913 Mkl2 protein_coding protein_coding MGP_NODShiLtJ_T0042914.1 MGP_NODShiLtJ_G0022361.1 mouse_genomes_project 16 10489656 10581252 + MGP_NODShiLtJ_P0042914 Mkl2 protein_coding protein_coding MGP_NODShiLtJ_T0042915.1 MGP_NODShiLtJ_G0022361.1 mouse_genomes_project 16 10610807 10672575 + MGP_NODShiLtJ_P0042915 Mkl2 protein_coding protein_coding MGP_NODShiLtJ_T0044782.1 MGP_NODShiLtJ_G0022867.1 mouse_genomes_project 16 103995776 104030509 + MGP_NODShiLtJ_P0044782 Ifnar2 protein_coding protein_coding MGP_NODShiLtJ_T0044783.1 MGP_NODShiLtJ_G0022867.1 mouse_genomes_project 16 103995836 104017784 + MGP_NODShiLtJ_P0044783 Ifnar2 protein_coding protein_coding MGP_NODShiLtJ_T0044784.1 MGP_NODShiLtJ_G0022867.1 mouse_genomes_project 16 103995845 104017961 + MGP_NODShiLtJ_P0044784 Ifnar2 protein_coding protein_coding MGP_NODShiLtJ_T0044785.1 MGP_NODShiLtJ_G0022867.1 mouse_genomes_project 16 104011709 104015697 + MGP_NODShiLtJ_P0044785 Ifnar2 protein_coding protein_coding MGP_NODShiLtJ_T0003629.1 MGP_NODShiLtJ_G0003280.1 mouse_genomes_project 16 47094250 47120696 + Gm15638 antisense antisense MGP_NODShiLtJ_T0003630.1 MGP_NODShiLtJ_G0003280.1 mouse_genomes_project 16 47094257 47106052 + Gm15638 antisense antisense MGP_NODShiLtJ_T0003631.1 MGP_NODShiLtJ_G0003280.1 mouse_genomes_project 16 47094262 47097319 + Gm15638 antisense antisense MGP_NODShiLtJ_T0017389.1 MGP_NODShiLtJ_G0015201.1 mouse_genomes_project 16 106145976 106166716 - 1810053B23Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017390.1 MGP_NODShiLtJ_G0015201.1 mouse_genomes_project 16 106146421 106155902 - 1810053B23Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017391.1 MGP_NODShiLtJ_G0015201.1 mouse_genomes_project 16 106146976 106156774 - 1810053B23Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017392.1 MGP_NODShiLtJ_G0015201.1 mouse_genomes_project 16 106147444 106156784 - 1810053B23Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017393.1 MGP_NODShiLtJ_G0015201.1 mouse_genomes_project 16 106148759 106167547 - 1810053B23Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017394.1 MGP_NODShiLtJ_G0015201.1 mouse_genomes_project 16 106149498 106167515 - 1810053B23Rik processed_transcript retained_intron MGP_NODShiLtJ_T0044986.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199747 108246584 + MGP_NODShiLtJ_P0044986 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044987.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199747 108245996 + MGP_NODShiLtJ_P0044987 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044988.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199747 108246584 + MGP_NODShiLtJ_P0044988 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044989.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199747 108246584 + MGP_NODShiLtJ_P0044989 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044990.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199747 108244868 + MGP_NODShiLtJ_P0044990 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044991.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199840 108246633 + MGP_NODShiLtJ_P0044991 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044992.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199848 108242067 + MGP_NODShiLtJ_P0044992 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044993.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199848 108242402 + MGP_NODShiLtJ_P0044993 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044994.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108199872 108242044 + MGP_NODShiLtJ_P0044994 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044995.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108201639 108246584 + MGP_NODShiLtJ_P0044995 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044996.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108201794 108238202 + Kcnj15 protein_coding processed_transcript MGP_NODShiLtJ_T0044997.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108201855 108246584 + MGP_NODShiLtJ_P0044997 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0044998.1 MGP_NODShiLtJ_G0022904.1 mouse_genomes_project 16 108223782 108238265 + MGP_NODShiLtJ_P0044998 Kcnj15 protein_coding protein_coding MGP_NODShiLtJ_T0045077.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110928059 110993058 - MGP_NODShiLtJ_P0045077 Prdm15 protein_coding protein_coding MGP_NODShiLtJ_T0045078.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110928112 110993681 - MGP_NODShiLtJ_P0045078 Prdm15 protein_coding protein_coding MGP_NODShiLtJ_T0045079.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110928469 110993614 - MGP_NODShiLtJ_P0045079 Prdm15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045080.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110928922 110936898 - Prdm15 protein_coding retained_intron MGP_NODShiLtJ_T0045081.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110930770 110981789 - MGP_NODShiLtJ_P0045081 Prdm15 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045082.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110931108 110941640 - Prdm15 protein_coding processed_transcript MGP_NODShiLtJ_T0045083.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110932317 110934515 - Prdm15 protein_coding retained_intron MGP_NODShiLtJ_T0045084.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110960576 110971530 - Prdm15 protein_coding retained_intron MGP_NODShiLtJ_T0045085.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110977195 110981797 - Prdm15 protein_coding retained_intron MGP_NODShiLtJ_T0045086.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110977613 110990714 - MGP_NODShiLtJ_P0045086 Prdm15 protein_coding protein_coding MGP_NODShiLtJ_T0045087.1 MGP_NODShiLtJ_G0022923.1 mouse_genomes_project 16 110979510 110993058 - MGP_NODShiLtJ_P0045087 Prdm15 protein_coding protein_coding MGP_NODShiLtJ_T0044910.1 MGP_NODShiLtJ_G0022892.1 mouse_genomes_project 16 106554392 106659674 + MGP_NODShiLtJ_P0044910 Dopey2 protein_coding protein_coding MGP_NODShiLtJ_T0044911.1 MGP_NODShiLtJ_G0022892.1 mouse_genomes_project 16 106554465 106659677 + MGP_NODShiLtJ_P0044911 Dopey2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043967.1 MGP_NODShiLtJ_G0022607.1 mouse_genomes_project 16 35869909 35891406 + MGP_NODShiLtJ_P0043967 Ccdc58 protein_coding protein_coding MGP_NODShiLtJ_T0043968.1 MGP_NODShiLtJ_G0022607.1 mouse_genomes_project 16 35869909 35891406 + MGP_NODShiLtJ_P0043968 Ccdc58 protein_coding protein_coding MGP_NODShiLtJ_T0043969.1 MGP_NODShiLtJ_G0022607.1 mouse_genomes_project 16 35880583 35891406 + MGP_NODShiLtJ_P0043969 Ccdc58 protein_coding protein_coding MGP_NODShiLtJ_T0017352.1 MGP_NODShiLtJ_G0015186.1 mouse_genomes_project 16 25482068 25529886 - Gm20319 processed_transcript processed_transcript MGP_NODShiLtJ_T0017353.1 MGP_NODShiLtJ_G0015186.1 mouse_genomes_project 16 25482366 25529897 - Gm20319 processed_transcript processed_transcript MGP_NODShiLtJ_T0017354.1 MGP_NODShiLtJ_G0015186.1 mouse_genomes_project 16 25497482 25529897 - Gm20319 processed_transcript processed_transcript MGP_NODShiLtJ_T0013021.1 MGP_NODShiLtJ_G0011129.1 mouse_genomes_project 16 16924086 17072761 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000148.1 MGP_NODShiLtJ_G0000108.1 mouse_genomes_project 16 16986912 16987396 - MGP_NODShiLtJ_P0000148 Iglv1 IG_V_gene IG_V_gene MGP_NODShiLtJ_T0003643.1 MGP_NODShiLtJ_G0003291.1 mouse_genomes_project 16 109168566 109170672 - Gm15317 antisense antisense MGP_NODShiLtJ_T0043988.1 MGP_NODShiLtJ_G0022618.1 mouse_genomes_project 16 36554135 36586962 + MGP_NODShiLtJ_P0043988 Ildr1 protein_coding protein_coding MGP_NODShiLtJ_T0043989.1 MGP_NODShiLtJ_G0022618.1 mouse_genomes_project 16 36554187 36577596 + Ildr1 protein_coding retained_intron MGP_NODShiLtJ_T0043990.1 MGP_NODShiLtJ_G0022618.1 mouse_genomes_project 16 36554314 36585773 + MGP_NODShiLtJ_P0043990 Ildr1 protein_coding protein_coding MGP_NODShiLtJ_T0043991.1 MGP_NODShiLtJ_G0022618.1 mouse_genomes_project 16 36575718 36582475 + Ildr1 protein_coding retained_intron MGP_NODShiLtJ_T0044184.1 MGP_NODShiLtJ_G0022662.1 mouse_genomes_project 16 45101853 45137425 + MGP_NODShiLtJ_P0044184 Naa50 protein_coding protein_coding MGP_NODShiLtJ_T0044185.1 MGP_NODShiLtJ_G0022662.1 mouse_genomes_project 16 45101876 45138317 + MGP_NODShiLtJ_P0044185 Naa50 protein_coding protein_coding MGP_NODShiLtJ_T0044186.1 MGP_NODShiLtJ_G0022662.1 mouse_genomes_project 16 45101909 45137423 + MGP_NODShiLtJ_P0044186 Naa50 protein_coding protein_coding MGP_NODShiLtJ_T0044187.1 MGP_NODShiLtJ_G0022662.1 mouse_genomes_project 16 45101915 45136125 + MGP_NODShiLtJ_P0044187 Naa50 protein_coding protein_coding MGP_NODShiLtJ_T0044736.1 MGP_NODShiLtJ_G0022857.1 mouse_genomes_project 16 103275712 103298128 + Mrap protein_coding processed_transcript MGP_NODShiLtJ_T0044737.1 MGP_NODShiLtJ_G0022857.1 mouse_genomes_project 16 103275712 103301374 + Mrap protein_coding processed_transcript MGP_NODShiLtJ_T0044738.1 MGP_NODShiLtJ_G0022857.1 mouse_genomes_project 16 103275712 103300885 + Mrap protein_coding processed_transcript MGP_NODShiLtJ_T0044739.1 MGP_NODShiLtJ_G0022857.1 mouse_genomes_project 16 103275712 103301374 + MGP_NODShiLtJ_P0044739 Mrap protein_coding protein_coding MGP_NODShiLtJ_T0098287.1 MGP_NODShiLtJ_G0036694.1 mouse_genomes_project 16 30275221 30279464 - Gm15742 sense_intronic sense_intronic MGP_NODShiLtJ_T0044352.1 MGP_NODShiLtJ_G0022706.1 mouse_genomes_project 16 54438379 54679080 - MGP_NODShiLtJ_P0044352 Alcam protein_coding protein_coding MGP_NODShiLtJ_T0044353.1 MGP_NODShiLtJ_G0022706.1 mouse_genomes_project 16 54440470 54485428 - MGP_NODShiLtJ_P0044353 Alcam protein_coding protein_coding MGP_NODShiLtJ_T0044354.1 MGP_NODShiLtJ_G0022706.1 mouse_genomes_project 16 54440850 54677471 - MGP_NODShiLtJ_P0044354 Alcam protein_coding protein_coding MGP_NODShiLtJ_T0044355.1 MGP_NODShiLtJ_G0022706.1 mouse_genomes_project 16 54442571 54459097 - Alcam protein_coding retained_intron MGP_NODShiLtJ_T0044356.1 MGP_NODShiLtJ_G0022706.1 mouse_genomes_project 16 54442604 54461151 - Alcam protein_coding retained_intron MGP_NODShiLtJ_T0044357.1 MGP_NODShiLtJ_G0022706.1 mouse_genomes_project 16 54458196 54677471 - MGP_NODShiLtJ_P0044357 Alcam protein_coding protein_coding MGP_NODShiLtJ_T0044358.1 MGP_NODShiLtJ_G0022706.1 mouse_genomes_project 16 54494595 54677660 - MGP_NODShiLtJ_P0044358 Alcam protein_coding protein_coding MGP_NODShiLtJ_T0011296.1 MGP_NODShiLtJ_G0009429.1 mouse_genomes_project 16 20960812 20961004 + Gm22481 misc_RNA misc_RNA MGP_NODShiLtJ_T0044566.1 MGP_NODShiLtJ_G0022780.1 mouse_genomes_project 16 84396872 84470569 - MGP_NODShiLtJ_P0044566 Lipi protein_coding protein_coding MGP_NODShiLtJ_T0013051.1 MGP_NODShiLtJ_G0011159.1 mouse_genomes_project 16 46555084 46558066 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101073.1 MGP_NODShiLtJ_G0039432.1 mouse_genomes_project 16 51250117 51250488 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101074.1 MGP_NODShiLtJ_G0039432.1 mouse_genomes_project 16 51250242 51251251 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0012998.1 MGP_NODShiLtJ_G0011106.1 mouse_genomes_project 16 5436617 5437152 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044526.1 MGP_NODShiLtJ_G0022766.1 mouse_genomes_project 16 68648890 69097857 - MGP_NODShiLtJ_P0044526 Epha3 protein_coding protein_coding MGP_NODShiLtJ_T0011295.1 MGP_NODShiLtJ_G0009428.1 mouse_genomes_project 16 18549738 18550013 + Gm23332 misc_RNA misc_RNA MGP_NODShiLtJ_T0003635.1 MGP_NODShiLtJ_G0003284.1 mouse_genomes_project 16 72782008 72789849 + antisense antisense MGP_NODShiLtJ_T0003636.1 MGP_NODShiLtJ_G0003284.1 mouse_genomes_project 16 72782014 72812031 + antisense antisense MGP_NODShiLtJ_T0044889.1 MGP_NODShiLtJ_G0022886.1 mouse_genomes_project 16 105109927 105184198 - MGP_NODShiLtJ_P0044889 Rcan1 protein_coding protein_coding MGP_NODShiLtJ_T0044890.1 MGP_NODShiLtJ_G0022886.1 mouse_genomes_project 16 105109927 105118048 - MGP_NODShiLtJ_P0044890 Rcan1 protein_coding protein_coding MGP_NODShiLtJ_T0101673.1 MGP_NODShiLtJ_G0039842.1 mouse_genomes_project 16 37920 38860 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0042843.1 MGP_NODShiLtJ_G0022345.1 mouse_genomes_project 16 7826175 7826901 - MGP_NODShiLtJ_P0042843 Prm2 protein_coding protein_coding MGP_NODShiLtJ_T0042844.1 MGP_NODShiLtJ_G0022345.1 mouse_genomes_project 16 7826332 7830930 - MGP_NODShiLtJ_P0042844 Prm2 protein_coding protein_coding MGP_NODShiLtJ_T0013045.1 MGP_NODShiLtJ_G0011153.1 mouse_genomes_project 16 38981336 38981730 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043541.1 MGP_NODShiLtJ_G0022498.1 mouse_genomes_project 16 20736566 20798001 - MGP_NODShiLtJ_P0043541 protein_coding protein_coding MGP_NODShiLtJ_T0043542.1 MGP_NODShiLtJ_G0022498.1 mouse_genomes_project 16 20739096 20758318 - MGP_NODShiLtJ_P0043542 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043543.1 MGP_NODShiLtJ_G0022498.1 mouse_genomes_project 16 20758352 20797980 - protein_coding processed_transcript MGP_NODShiLtJ_T0043544.1 MGP_NODShiLtJ_G0022498.1 mouse_genomes_project 16 20769406 20797934 - MGP_NODShiLtJ_P0043544 protein_coding protein_coding MGP_NODShiLtJ_T0010033.1 MGP_NODShiLtJ_G0008166.1 mouse_genomes_project 16 20893107 20893236 - Mir8095 miRNA miRNA MGP_NODShiLtJ_T0044678.1 MGP_NODShiLtJ_G0022820.1 mouse_genomes_project 16 100951206 100954931 - MGP_NODShiLtJ_P0044678 Krtap13 protein_coding protein_coding MGP_NODShiLtJ_T0042645.1 MGP_NODShiLtJ_G0022292.1 mouse_genomes_project 16 547027 690758 - MGP_NODShiLtJ_P0042645 Crebbp protein_coding protein_coding MGP_NODShiLtJ_T0042646.1 MGP_NODShiLtJ_G0022292.1 mouse_genomes_project 16 549400 689319 - MGP_NODShiLtJ_P0042646 Crebbp protein_coding protein_coding MGP_NODShiLtJ_T0042647.1 MGP_NODShiLtJ_G0022292.1 mouse_genomes_project 16 552309 555451 - Crebbp protein_coding retained_intron MGP_NODShiLtJ_T0042648.1 MGP_NODShiLtJ_G0022292.1 mouse_genomes_project 16 553508 554303 - Crebbp protein_coding retained_intron MGP_NODShiLtJ_T0042649.1 MGP_NODShiLtJ_G0022292.1 mouse_genomes_project 16 554087 560316 - MGP_NODShiLtJ_P0042649 Crebbp protein_coding protein_coding MGP_NODShiLtJ_T0042650.1 MGP_NODShiLtJ_G0022292.1 mouse_genomes_project 16 557546 596304 - MGP_NODShiLtJ_P0042650 Crebbp protein_coding protein_coding MGP_NODShiLtJ_T0042651.1 MGP_NODShiLtJ_G0022292.1 mouse_genomes_project 16 557897 561798 - MGP_NODShiLtJ_P0042651 Crebbp protein_coding protein_coding MGP_NODShiLtJ_T0042652.1 MGP_NODShiLtJ_G0022292.1 mouse_genomes_project 16 586842 594285 - MGP_NODShiLtJ_P0042652 Crebbp protein_coding protein_coding MGP_NODShiLtJ_T0098981.1 MGP_NODShiLtJ_G0037375.1 mouse_genomes_project 16 104589155 104589262 - Gm25245 snRNA snRNA MGP_NODShiLtJ_T0043932.1 MGP_NODShiLtJ_G0022597.1 mouse_genomes_project 16 35119009 35219764 - MGP_NODShiLtJ_P0043932 Pdia5 protein_coding protein_coding MGP_NODShiLtJ_T0003593.1 MGP_NODShiLtJ_G0003250.1 mouse_genomes_project 16 1553571 1558653 + Gm42477 antisense antisense MGP_NODShiLtJ_T0043318.1 MGP_NODShiLtJ_G0022444.1 mouse_genomes_project 16 16345183 16347941 + MGP_NODShiLtJ_P0043318 Gm16314 protein_coding protein_coding MGP_NODShiLtJ_T0006776.1 MGP_NODShiLtJ_G0005579.1 mouse_genomes_project 16 20122449 20124775 - Gm26744 lincRNA lincRNA MGP_NODShiLtJ_T0043103.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 14996754 15003042 + MGP_NODShiLtJ_P0043103 Tmem191c protein_coding protein_coding MGP_NODShiLtJ_T0043104.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001176 15003527 + MGP_NODShiLtJ_P0043104 Tmem191c protein_coding protein_coding MGP_NODShiLtJ_T0043105.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001195 15002346 + Tmem191c protein_coding processed_transcript MGP_NODShiLtJ_T0043106.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001209 15001964 + Tmem191c protein_coding retained_intron MGP_NODShiLtJ_T0043107.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001209 15003523 + MGP_NODShiLtJ_P0043107 Tmem191c protein_coding protein_coding MGP_NODShiLtJ_T0043108.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001215 15002268 + Tmem191c protein_coding processed_transcript MGP_NODShiLtJ_T0043109.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001301 15002603 + MGP_NODShiLtJ_P0043109 Tmem191c protein_coding protein_coding MGP_NODShiLtJ_T0043110.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001544 15003527 + MGP_NODShiLtJ_P0043110 Tmem191c protein_coding protein_coding MGP_NODShiLtJ_T0043111.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001727 15003071 + MGP_NODShiLtJ_P0043111 Tmem191c protein_coding protein_coding MGP_NODShiLtJ_T0043112.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001948 15002919 + Tmem191c protein_coding retained_intron MGP_NODShiLtJ_T0043113.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15001962 15003032 + Tmem191c protein_coding retained_intron MGP_NODShiLtJ_T0043114.1 MGP_NODShiLtJ_G0022405.1 mouse_genomes_project 16 15002466 15008092 + Tmem191c protein_coding retained_intron MGP_NODShiLtJ_T0013009.1 MGP_NODShiLtJ_G0011117.1 mouse_genomes_project 16 11418739 11419343 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098288.1 MGP_NODShiLtJ_G0036695.1 mouse_genomes_project 16 104787523 104789446 + Gm16310 sense_intronic sense_intronic MGP_NODShiLtJ_T0013019.1 MGP_NODShiLtJ_G0011127.1 mouse_genomes_project 16 16853280 16853688 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043787.1 MGP_NODShiLtJ_G0022566.1 mouse_genomes_project 16 31816159 31823777 + MGP_NODShiLtJ_P0043787 Tm4sf19 protein_coding protein_coding MGP_NODShiLtJ_T0045038.1 MGP_NODShiLtJ_G0022911.1 mouse_genomes_project 16 109181509 109219778 - MGP_NODShiLtJ_P0045038 Lca5l protein_coding protein_coding MGP_NODShiLtJ_T0045039.1 MGP_NODShiLtJ_G0022911.1 mouse_genomes_project 16 109182174 109219785 - MGP_NODShiLtJ_P0045039 Lca5l protein_coding protein_coding MGP_NODShiLtJ_T0045040.1 MGP_NODShiLtJ_G0022911.1 mouse_genomes_project 16 109182174 109206561 - MGP_NODShiLtJ_P0045040 Lca5l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045041.1 MGP_NODShiLtJ_G0022911.1 mouse_genomes_project 16 109183593 109219778 - Lca5l protein_coding retained_intron MGP_NODShiLtJ_T0045042.1 MGP_NODShiLtJ_G0022911.1 mouse_genomes_project 16 109207656 109219785 - Lca5l protein_coding processed_transcript MGP_NODShiLtJ_T0098953.1 MGP_NODShiLtJ_G0037347.1 mouse_genomes_project 16 36003178 36003285 - Gm22885 snRNA snRNA MGP_NODShiLtJ_T0043321.1 MGP_NODShiLtJ_G0022445.1 mouse_genomes_project 16 16432353 16437606 - MGP_NODShiLtJ_P0043321 Tbx1 protein_coding protein_coding MGP_NODShiLtJ_T0043089.1 MGP_NODShiLtJ_G0022401.1 mouse_genomes_project 16 14854479 14861475 + MGP_NODShiLtJ_P0043089 Ydjc protein_coding protein_coding MGP_NODShiLtJ_T0043090.1 MGP_NODShiLtJ_G0022401.1 mouse_genomes_project 16 14855701 14858705 + Ydjc protein_coding retained_intron MGP_NODShiLtJ_T0043091.1 MGP_NODShiLtJ_G0022401.1 mouse_genomes_project 16 14856795 14871972 + MGP_NODShiLtJ_P0043091 Ydjc protein_coding protein_coding MGP_NODShiLtJ_T0043092.1 MGP_NODShiLtJ_G0022401.1 mouse_genomes_project 16 14856807 14861891 + Ydjc protein_coding retained_intron MGP_NODShiLtJ_T0043093.1 MGP_NODShiLtJ_G0022401.1 mouse_genomes_project 16 14856834 14858705 + Ydjc protein_coding retained_intron MGP_NODShiLtJ_T0043094.1 MGP_NODShiLtJ_G0022401.1 mouse_genomes_project 16 14856837 14858705 + MGP_NODShiLtJ_P0043094 Ydjc protein_coding protein_coding MGP_NODShiLtJ_T0003605.1 MGP_NODShiLtJ_G0003261.1 mouse_genomes_project 16 20871393 20877574 + 9230117E06Rik antisense antisense MGP_NODShiLtJ_T0042961.1 MGP_NODShiLtJ_G0022372.1 mouse_genomes_project 16 11468012 11525307 - MGP_NODShiLtJ_P0042961 Marf1 protein_coding protein_coding MGP_NODShiLtJ_T0044492.1 MGP_NODShiLtJ_G0022755.1 mouse_genomes_project 16 63066490 63067495 - MGP_NODShiLtJ_P0044492 Olfr206 protein_coding protein_coding MGP_NODShiLtJ_T0100237.1 MGP_NODShiLtJ_G0038631.1 mouse_genomes_project 16 98838868 98838993 + Gm25715 snoRNA snoRNA MGP_NODShiLtJ_T0043627.1 MGP_NODShiLtJ_G0022524.1 mouse_genomes_project 16 25242007 25280366 - MGP_NODShiLtJ_P0043627 Tmem207 protein_coding protein_coding MGP_NODShiLtJ_T0017350.1 MGP_NODShiLtJ_G0015184.1 mouse_genomes_project 16 20912506 20915103 + Gm15651 processed_transcript processed_transcript MGP_NODShiLtJ_T0098954.1 MGP_NODShiLtJ_G0037348.1 mouse_genomes_project 16 36016072 36016176 - Gm25024 snRNA snRNA MGP_NODShiLtJ_T0042613.1 MGP_NODShiLtJ_G0022287.1 mouse_genomes_project 16 350634 365638 + MGP_NODShiLtJ_P0042613 Cluap1 protein_coding protein_coding MGP_NODShiLtJ_T0042614.1 MGP_NODShiLtJ_G0022287.1 mouse_genomes_project 16 350658 383785 + MGP_NODShiLtJ_P0042614 Cluap1 protein_coding protein_coding MGP_NODShiLtJ_T0042615.1 MGP_NODShiLtJ_G0022287.1 mouse_genomes_project 16 350872 355406 + Cluap1 protein_coding retained_intron MGP_NODShiLtJ_T0042616.1 MGP_NODShiLtJ_G0022287.1 mouse_genomes_project 16 350909 372606 + MGP_NODShiLtJ_P0042616 Cluap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042617.1 MGP_NODShiLtJ_G0022287.1 mouse_genomes_project 16 350939 365694 + MGP_NODShiLtJ_P0042617 Cluap1 protein_coding protein_coding MGP_NODShiLtJ_T0013078.1 MGP_NODShiLtJ_G0011186.1 mouse_genomes_project 16 103489747 103490299 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017395.1 MGP_NODShiLtJ_G0015202.1 mouse_genomes_project 16 109045386 109048040 + Gm15342 processed_transcript processed_transcript MGP_NODShiLtJ_T0044548.1 MGP_NODShiLtJ_G0022777.1 mouse_genomes_project 16 77694732 77986237 + MGP_NODShiLtJ_P0044548 Gbe1 protein_coding protein_coding MGP_NODShiLtJ_T0044549.1 MGP_NODShiLtJ_G0022777.1 mouse_genomes_project 16 77694846 77754635 + Gbe1 protein_coding retained_intron MGP_NODShiLtJ_T0044550.1 MGP_NODShiLtJ_G0022777.1 mouse_genomes_project 16 77694847 77956408 + Gbe1 protein_coding retained_intron MGP_NODShiLtJ_T0044551.1 MGP_NODShiLtJ_G0022777.1 mouse_genomes_project 16 77694847 77955977 + MGP_NODShiLtJ_P0044551 Gbe1 protein_coding protein_coding MGP_NODShiLtJ_T0044552.1 MGP_NODShiLtJ_G0022777.1 mouse_genomes_project 16 77694870 77986237 + MGP_NODShiLtJ_P0044552 Gbe1 protein_coding protein_coding MGP_NODShiLtJ_T0044553.1 MGP_NODShiLtJ_G0022777.1 mouse_genomes_project 16 77694917 77986235 + MGP_NODShiLtJ_P0044553 Gbe1 protein_coding protein_coding MGP_NODShiLtJ_T0044554.1 MGP_NODShiLtJ_G0022777.1 mouse_genomes_project 16 77973804 77986018 + Gbe1 protein_coding retained_intron MGP_NODShiLtJ_T0101681.1 MGP_NODShiLtJ_G0039850.1 mouse_genomes_project 16 62659073 62659877 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010032.1 MGP_NODShiLtJ_G0008165.1 mouse_genomes_project 16 19475969 19476023 - Mir7680 miRNA miRNA MGP_NODShiLtJ_T0043329.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16702266 16705692 + MGP_NODShiLtJ_P0043329 Ufd1l protein_coding protein_coding MGP_NODShiLtJ_T0043330.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16702311 16724637 + MGP_NODShiLtJ_P0043330 Ufd1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043331.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16702319 16725583 + MGP_NODShiLtJ_P0043331 Ufd1l protein_coding protein_coding MGP_NODShiLtJ_T0043332.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16702781 16706245 + Ufd1l protein_coding processed_transcript MGP_NODShiLtJ_T0043333.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16702781 16725588 + MGP_NODShiLtJ_P0043333 Ufd1l protein_coding protein_coding MGP_NODShiLtJ_T0043334.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16702808 16718024 + MGP_NODShiLtJ_P0043334 Ufd1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043335.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16702843 16715377 + MGP_NODShiLtJ_P0043335 Ufd1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043336.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16713560 16724581 + Ufd1l protein_coding retained_intron MGP_NODShiLtJ_T0043337.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16717387 16718782 + MGP_NODShiLtJ_P0043337 Ufd1l protein_coding protein_coding MGP_NODShiLtJ_T0043338.1 MGP_NODShiLtJ_G0022450.1 mouse_genomes_project 16 16717575 16724731 + Ufd1l protein_coding retained_intron MGP_NODShiLtJ_T0044672.1 MGP_NODShiLtJ_G0022814.1 mouse_genomes_project 16 100781583 100783154 - MGP_NODShiLtJ_P0044672 Krtap24-1 protein_coding protein_coding MGP_NODShiLtJ_T0043115.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15005216 15153598 - MGP_NODShiLtJ_P0043115 Pi4ka protein_coding protein_coding MGP_NODShiLtJ_T0043116.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15005217 15006508 - Pi4ka protein_coding retained_intron MGP_NODShiLtJ_T0043117.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15005217 15009826 - Pi4ka protein_coding retained_intron MGP_NODShiLtJ_T0043118.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15005217 15032889 - MGP_NODShiLtJ_P0043118 Pi4ka protein_coding protein_coding MGP_NODShiLtJ_T0043119.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15005217 15153177 - MGP_NODShiLtJ_P0043119 Pi4ka protein_coding protein_coding MGP_NODShiLtJ_T0043120.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15005218 15006938 - Pi4ka protein_coding retained_intron MGP_NODShiLtJ_T0043121.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15007684 15008988 - Pi4ka protein_coding retained_intron MGP_NODShiLtJ_T0043122.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15022348 15032512 - MGP_NODShiLtJ_P0043122 Pi4ka protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043123.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15033000 15051541 - MGP_NODShiLtJ_P0043123 Pi4ka protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043124.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15037197 15076906 - MGP_NODShiLtJ_P0043124 Pi4ka protein_coding protein_coding MGP_NODShiLtJ_T0043125.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15049023 15076868 - Pi4ka protein_coding retained_intron MGP_NODShiLtJ_T0043128.1 MGP_NODShiLtJ_G0022406.1 mouse_genomes_project 16 15091603 15153177 - Pi4ka protein_coding retained_intron MGP_NODShiLtJ_T0043231.1 MGP_NODShiLtJ_G0022429.1 mouse_genomes_project 16 15773598 15774328 + MGP_NODShiLtJ_P0043231 protein_coding protein_coding MGP_NODShiLtJ_T0044094.1 MGP_NODShiLtJ_G0022644.1 mouse_genomes_project 16 38646192 38674069 - MGP_NODShiLtJ_P0044094 Timmdc1 protein_coding protein_coding MGP_NODShiLtJ_T0044095.1 MGP_NODShiLtJ_G0022644.1 mouse_genomes_project 16 38668066 38674047 - Timmdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0100196.1 MGP_NODShiLtJ_G0038590.1 mouse_genomes_project 16 17248812 17248938 + Gm22158 snoRNA snoRNA MGP_NODShiLtJ_T0010062.1 MGP_NODShiLtJ_G0008195.1 mouse_genomes_project 16 86855117 86855211 + Mirlet7c-1 miRNA miRNA MGP_NODShiLtJ_T0043293.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268385 16325283 + MGP_NODShiLtJ_P0043293 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043294.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268418 16325286 + MGP_NODShiLtJ_P0043294 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043295.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268418 16325289 + MGP_NODShiLtJ_P0043295 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043296.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268439 16302684 + MGP_NODShiLtJ_P0043296 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043297.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268439 16325283 + MGP_NODShiLtJ_P0043297 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043298.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268439 16325283 + MGP_NODShiLtJ_P0043298 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043299.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268442 16325287 + MGP_NODShiLtJ_P0043299 Txnrd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043300.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268446 16325286 + MGP_NODShiLtJ_P0043300 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043301.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16268463 16282325 + MGP_NODShiLtJ_P0043301 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043302.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16270698 16282323 + MGP_NODShiLtJ_P0043302 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043303.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16270926 16288816 + MGP_NODShiLtJ_P0043303 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043304.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16286410 16288059 + MGP_NODShiLtJ_P0043304 Txnrd2 protein_coding protein_coding MGP_NODShiLtJ_T0043305.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16298254 16320905 + Txnrd2 protein_coding processed_transcript MGP_NODShiLtJ_T0043306.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16298260 16320951 + Txnrd2 protein_coding processed_transcript MGP_NODShiLtJ_T0043307.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16318036 16320914 + Txnrd2 protein_coding processed_transcript MGP_NODShiLtJ_T0043308.1 MGP_NODShiLtJ_G0022442.1 mouse_genomes_project 16 16318066 16320903 + Txnrd2 protein_coding processed_transcript MGP_NODShiLtJ_T0043360.1 MGP_NODShiLtJ_G0022461.1 mouse_genomes_project 16 17636554 17637609 - MGP_NODShiLtJ_P0043360 Olfr169 protein_coding protein_coding MGP_NODShiLtJ_T0043341.1 MGP_NODShiLtJ_G0022452.1 mouse_genomes_project 16 16726930 16865266 + MGP_NODShiLtJ_P0043341 Gm28539 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100197.1 MGP_NODShiLtJ_G0038591.1 mouse_genomes_project 16 17365560 17365692 + Gm25762 snoRNA snoRNA MGP_NODShiLtJ_T0043898.1 MGP_NODShiLtJ_G0022589.1 mouse_genomes_project 16 33588369 33600626 - MGP_NODShiLtJ_P0043898 Umps protein_coding protein_coding MGP_NODShiLtJ_T0043899.1 MGP_NODShiLtJ_G0022589.1 mouse_genomes_project 16 33588381 33600591 - MGP_NODShiLtJ_P0043899 Umps protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045030.1 MGP_NODShiLtJ_G0022909.1 mouse_genomes_project 16 109140328 109144548 - Hmgn1 protein_coding retained_intron MGP_NODShiLtJ_T0045031.1 MGP_NODShiLtJ_G0022909.1 mouse_genomes_project 16 109140382 109146817 - MGP_NODShiLtJ_P0045031 Hmgn1 protein_coding protein_coding MGP_NODShiLtJ_T0045032.1 MGP_NODShiLtJ_G0022909.1 mouse_genomes_project 16 109140382 109146817 - MGP_NODShiLtJ_P0045032 Hmgn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045033.1 MGP_NODShiLtJ_G0022909.1 mouse_genomes_project 16 109145817 109146679 - Hmgn1 protein_coding retained_intron MGP_NODShiLtJ_T0042758.1 MGP_NODShiLtJ_G0022321.1 mouse_genomes_project 16 3514608 4146956 + MGP_NODShiLtJ_P0042758 Rbfox1 protein_coding protein_coding MGP_NODShiLtJ_T0042759.1 MGP_NODShiLtJ_G0022321.1 mouse_genomes_project 16 3786918 4149610 + MGP_NODShiLtJ_P0042759 Rbfox1 protein_coding protein_coding MGP_NODShiLtJ_T0042760.1 MGP_NODShiLtJ_G0022321.1 mouse_genomes_project 16 3948327 4145712 + MGP_NODShiLtJ_P0042760 Rbfox1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013029.1 MGP_NODShiLtJ_G0011137.1 mouse_genomes_project 16 21643705 21644159 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013003.1 MGP_NODShiLtJ_G0011111.1 mouse_genomes_project 16 8258783 8259750 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043923.1 MGP_NODShiLtJ_G0022593.1 mouse_genomes_project 16 34438062 34578010 + Mylk protein_coding retained_intron MGP_NODShiLtJ_T0043924.1 MGP_NODShiLtJ_G0022593.1 mouse_genomes_project 16 34481711 34704362 + MGP_NODShiLtJ_P0043924 Mylk protein_coding protein_coding MGP_NODShiLtJ_T0098979.1 MGP_NODShiLtJ_G0037373.1 mouse_genomes_project 16 101858257 101858362 - Gm23655 snRNA snRNA MGP_NODShiLtJ_T0000017.1 MGP_NODShiLtJ_G0000012.1 mouse_genomes_project 16 17123940 17124254 - MGP_NODShiLtJ_P0000017 Iglc4 IG_C_gene IG_C_gene MGP_NODShiLtJ_T0044674.1 MGP_NODShiLtJ_G0022816.1 mouse_genomes_project 16 100823728 100824701 - MGP_NODShiLtJ_P0044674 Krtap26-1 protein_coding protein_coding MGP_NODShiLtJ_T0017363.1 MGP_NODShiLtJ_G0015192.1 mouse_genomes_project 16 72448515 72458198 + 1700010K23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0006788.1 MGP_NODShiLtJ_G0005591.1 mouse_genomes_project 16 38597103 38598614 + D930030I03Rik lincRNA lincRNA MGP_NODShiLtJ_T0003612.1 MGP_NODShiLtJ_G0003267.1 mouse_genomes_project 16 33383470 33403033 - Gm15658 antisense antisense MGP_NODShiLtJ_T0042993.1 MGP_NODShiLtJ_G0022383.1 mouse_genomes_project 16 13111703 13183445 + Prkdc protein_coding retained_intron MGP_NODShiLtJ_T0042994.1 MGP_NODShiLtJ_G0022383.1 mouse_genomes_project 16 13111726 13365654 + MGP_NODShiLtJ_P0042994 Prkdc protein_coding protein_coding MGP_NODShiLtJ_T0042958.1 MGP_NODShiLtJ_G0022370.1 mouse_genomes_project 16 11327294 11332282 - MGP_NODShiLtJ_P0042958 Ifitm7 protein_coding protein_coding MGP_NODShiLtJ_T0042959.1 MGP_NODShiLtJ_G0022370.1 mouse_genomes_project 16 11328391 11330214 - MGP_NODShiLtJ_P0042959 Ifitm7 protein_coding protein_coding MGP_NODShiLtJ_T0013018.1 MGP_NODShiLtJ_G0011126.1 mouse_genomes_project 16 16846443 16846732 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044460.1 MGP_NODShiLtJ_G0022736.1 mouse_genomes_project 16 62315732 62316821 - MGP_NODShiLtJ_P0044460 Olfr172 protein_coding protein_coding MGP_NODShiLtJ_T0042907.1 MGP_NODShiLtJ_G0022360.1 mouse_genomes_project 16 10334096 10370240 + MGP_NODShiLtJ_P0042907 Ercc4 protein_coding protein_coding MGP_NODShiLtJ_T0042908.1 MGP_NODShiLtJ_G0022360.1 mouse_genomes_project 16 10334329 10350157 + Ercc4 protein_coding retained_intron MGP_NODShiLtJ_T0042909.1 MGP_NODShiLtJ_G0022360.1 mouse_genomes_project 16 10334347 10353938 + MGP_NODShiLtJ_P0042909 Ercc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042910.1 MGP_NODShiLtJ_G0022360.1 mouse_genomes_project 16 10336238 10372123 + MGP_NODShiLtJ_P0042910 Ercc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042911.1 MGP_NODShiLtJ_G0022360.1 mouse_genomes_project 16 10358698 10364885 + Ercc4 protein_coding processed_transcript MGP_NODShiLtJ_T0044032.1 MGP_NODShiLtJ_G0022625.1 mouse_genomes_project 16 36927448 37013765 + MGP_NODShiLtJ_P0044032 Polq protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044033.1 MGP_NODShiLtJ_G0022625.1 mouse_genomes_project 16 36927448 37014170 + MGP_NODShiLtJ_P0044033 Polq protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044034.1 MGP_NODShiLtJ_G0022625.1 mouse_genomes_project 16 36927448 37013765 + MGP_NODShiLtJ_P0044034 Polq protein_coding protein_coding MGP_NODShiLtJ_T0044035.1 MGP_NODShiLtJ_G0022625.1 mouse_genomes_project 16 36927448 37014190 + MGP_NODShiLtJ_P0044035 Polq protein_coding protein_coding MGP_NODShiLtJ_T0044036.1 MGP_NODShiLtJ_G0022625.1 mouse_genomes_project 16 36927477 36933860 + Polq protein_coding retained_intron MGP_NODShiLtJ_T0044037.1 MGP_NODShiLtJ_G0022625.1 mouse_genomes_project 16 36956803 36979955 + Polq protein_coding retained_intron MGP_NODShiLtJ_T0044038.1 MGP_NODShiLtJ_G0022625.1 mouse_genomes_project 16 37004693 37014190 + Polq protein_coding retained_intron MGP_NODShiLtJ_T0044605.1 MGP_NODShiLtJ_G0022797.1 mouse_genomes_project 16 96327419 96400165 + MGP_NODShiLtJ_P0044605 Jam2 protein_coding protein_coding MGP_NODShiLtJ_T0044606.1 MGP_NODShiLtJ_G0022797.1 mouse_genomes_project 16 96327682 96385233 + MGP_NODShiLtJ_P0044606 Jam2 protein_coding protein_coding MGP_NODShiLtJ_T0044607.1 MGP_NODShiLtJ_G0022797.1 mouse_genomes_project 16 96383643 96397123 + Jam2 protein_coding processed_transcript MGP_NODShiLtJ_T0044464.1 MGP_NODShiLtJ_G0022739.1 mouse_genomes_project 16 62429448 62431218 - MGP_NODShiLtJ_P0044464 Olfr177 protein_coding protein_coding MGP_NODShiLtJ_T0044465.1 MGP_NODShiLtJ_G0022739.1 mouse_genomes_project 16 62429448 62430389 - MGP_NODShiLtJ_P0044465 Olfr177 protein_coding protein_coding MGP_NODShiLtJ_T0043645.1 MGP_NODShiLtJ_G0022531.1 mouse_genomes_project 16 27983916 28087101 - MGP_NODShiLtJ_P0043645 Mb21d2 protein_coding protein_coding MGP_NODShiLtJ_T0011305.1 MGP_NODShiLtJ_G0009438.1 mouse_genomes_project 16 91462776 91463089 - Gm26023 misc_RNA misc_RNA MGP_NODShiLtJ_T0043388.1 MGP_NODShiLtJ_G0022470.1 mouse_genomes_project 16 18398151 18413557 - protein_coding processed_transcript MGP_NODShiLtJ_T0043389.1 MGP_NODShiLtJ_G0022470.1 mouse_genomes_project 16 18398151 18413614 - MGP_NODShiLtJ_P0043389 protein_coding protein_coding MGP_NODShiLtJ_T0043390.1 MGP_NODShiLtJ_G0022470.1 mouse_genomes_project 16 18399434 18403975 - protein_coding processed_transcript MGP_NODShiLtJ_T0043391.1 MGP_NODShiLtJ_G0022470.1 mouse_genomes_project 16 18399540 18406515 - MGP_NODShiLtJ_P0043391 protein_coding protein_coding MGP_NODShiLtJ_T0043392.1 MGP_NODShiLtJ_G0022470.1 mouse_genomes_project 16 18404784 18405816 - protein_coding processed_transcript MGP_NODShiLtJ_T0098956.1 MGP_NODShiLtJ_G0037350.1 mouse_genomes_project 16 36167872 36167977 + Gm23306 snRNA snRNA MGP_NODShiLtJ_T0043033.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556482 14571559 + MGP_NODShiLtJ_P0043033 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043034.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556503 14578695 + MGP_NODShiLtJ_P0043034 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043035.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556513 14565042 + MGP_NODShiLtJ_P0043035 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043036.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556520 14569243 + MGP_NODShiLtJ_P0043036 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043037.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556527 14578700 + MGP_NODShiLtJ_P0043037 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043038.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556532 14571176 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043039.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556533 14566366 + MGP_NODShiLtJ_P0043039 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043040.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556546 14565057 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043041.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556553 14564769 + MGP_NODShiLtJ_P0043041 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043042.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556563 14578700 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043043.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556586 14564704 + MGP_NODShiLtJ_P0043043 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043044.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14556711 14565184 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043045.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14569158 14578683 + MGP_NODShiLtJ_P0043045 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043046.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14569928 14578700 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043047.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14571235 14572416 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043048.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14572353 14573420 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043049.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14572619 14573597 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043050.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14573548 14578685 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0043051.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14575935 14578210 + MGP_NODShiLtJ_P0043051 Top3b protein_coding protein_coding MGP_NODShiLtJ_T0043052.1 MGP_NODShiLtJ_G0022393.1 mouse_genomes_project 16 14577211 14578129 + Top3b protein_coding retained_intron MGP_NODShiLtJ_T0044808.1 MGP_NODShiLtJ_G0022874.1 mouse_genomes_project 16 104269709 104298984 - MGP_NODShiLtJ_P0044808 Gart protein_coding protein_coding MGP_NODShiLtJ_T0044809.1 MGP_NODShiLtJ_G0022874.1 mouse_genomes_project 16 104269916 104293626 - MGP_NODShiLtJ_P0044809 Gart protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044810.1 MGP_NODShiLtJ_G0022874.1 mouse_genomes_project 16 104282810 104298967 - MGP_NODShiLtJ_P0044810 Gart protein_coding protein_coding MGP_NODShiLtJ_T0010027.1 MGP_NODShiLtJ_G0008160.1 mouse_genomes_project 16 16153030 16153095 - Mir185 miRNA miRNA MGP_NODShiLtJ_T0044585.1 MGP_NODShiLtJ_G0022786.1 mouse_genomes_project 16 86086496 86208813 + MGP_NODShiLtJ_P0044585 Usp25 protein_coding protein_coding MGP_NODShiLtJ_T0044696.1 MGP_NODShiLtJ_G0022836.1 mouse_genomes_project 16 101307532 101308126 + MGP_NODShiLtJ_P0044696 Krtap6-1 protein_coding protein_coding MGP_NODShiLtJ_T0101678.1 MGP_NODShiLtJ_G0039847.1 mouse_genomes_project 16 62580194 62581028 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0098284.1 MGP_NODShiLtJ_G0036691.1 mouse_genomes_project 16 2612675 2636545 + 1700123O21Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0006807.1 MGP_NODShiLtJ_G0005604.1 mouse_genomes_project 16 77045329 77063289 - lincRNA lincRNA MGP_NODShiLtJ_T0044466.1 MGP_NODShiLtJ_G0022740.1 mouse_genomes_project 16 62445473 62446433 - MGP_NODShiLtJ_P0044466 Olfr178 protein_coding protein_coding MGP_NODShiLtJ_T0044467.1 MGP_NODShiLtJ_G0022740.1 mouse_genomes_project 16 62445473 62450016 - MGP_NODShiLtJ_P0044467 Olfr178 protein_coding protein_coding MGP_NODShiLtJ_T0010031.1 MGP_NODShiLtJ_G0008164.1 mouse_genomes_project 16 18722403 18722488 + Mir1224 miRNA miRNA MGP_NODShiLtJ_T0013054.1 MGP_NODShiLtJ_G0011162.1 mouse_genomes_project 16 49819206 49819806 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010069.1 MGP_NODShiLtJ_G0008202.1 mouse_genomes_project 16 105851730 105851798 + Gm28003 miRNA miRNA MGP_NODShiLtJ_T0044488.1 MGP_NODShiLtJ_G0022751.1 mouse_genomes_project 16 62889503 62890543 - MGP_NODShiLtJ_P0044488 protein_coding protein_coding MGP_NODShiLtJ_T0003604.1 MGP_NODShiLtJ_G0003260.1 mouse_genomes_project 16 16961904 17012300 + antisense antisense MGP_NODShiLtJ_T0097776.1 MGP_NODShiLtJ_G0036188.1 mouse_genomes_project 16 101215858 101216094 - pseudogene pseudogene MGP_NODShiLtJ_T0043704.1 MGP_NODShiLtJ_G0022545.1 mouse_genomes_project 16 30261862 30397544 - MGP_NODShiLtJ_P0043704 Xxylt1 protein_coding protein_coding MGP_NODShiLtJ_T0043705.1 MGP_NODShiLtJ_G0022545.1 mouse_genomes_project 16 30263696 30376897 - Xxylt1 protein_coding processed_transcript MGP_NODShiLtJ_T0043706.1 MGP_NODShiLtJ_G0022545.1 mouse_genomes_project 16 30321880 30386111 - Xxylt1 protein_coding processed_transcript MGP_NODShiLtJ_T0043707.1 MGP_NODShiLtJ_G0022545.1 mouse_genomes_project 16 30321922 30384111 - Xxylt1 protein_coding processed_transcript MGP_NODShiLtJ_T0042841.1 MGP_NODShiLtJ_G0022343.1 mouse_genomes_project 16 7822746 7823466 - MGP_NODShiLtJ_P0042841 Tnp2 protein_coding protein_coding MGP_NODShiLtJ_T0042807.1 MGP_NODShiLtJ_G0022334.1 mouse_genomes_project 16 7148373 7199247 + MGP_NODShiLtJ_P0042807 Atf7ip2 protein_coding protein_coding MGP_NODShiLtJ_T0042808.1 MGP_NODShiLtJ_G0022334.1 mouse_genomes_project 16 7148583 7197010 + MGP_NODShiLtJ_P0042808 Atf7ip2 protein_coding protein_coding MGP_NODShiLtJ_T0042809.1 MGP_NODShiLtJ_G0022334.1 mouse_genomes_project 16 7148608 7169445 + Atf7ip2 protein_coding retained_intron MGP_NODShiLtJ_T0011695.1 MGP_NODShiLtJ_G0009823.1 mouse_genomes_project 16 110647207 110674169 + MGP_NODShiLtJ_P0011695 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011696.1 MGP_NODShiLtJ_G0009823.1 mouse_genomes_project 16 110647977 110674730 + MGP_NODShiLtJ_P0011696 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011697.1 MGP_NODShiLtJ_G0009823.1 mouse_genomes_project 16 110647979 110674729 + MGP_NODShiLtJ_P0011697 polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0011698.1 MGP_NODShiLtJ_G0009823.1 mouse_genomes_project 16 110663432 110665016 + polymorphic_pseudogene processed_transcript MGP_NODShiLtJ_T0011699.1 MGP_NODShiLtJ_G0009823.1 mouse_genomes_project 16 110672241 110674348 + polymorphic_pseudogene retained_intron MGP_NODShiLtJ_T0044528.1 MGP_NODShiLtJ_G0022768.1 mouse_genomes_project 16 70172725 70188444 - 4930453N24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0044529.1 MGP_NODShiLtJ_G0022768.1 mouse_genomes_project 16 70184033 70192858 - MGP_NODShiLtJ_P0044529 4930453N24Rik protein_coding protein_coding MGP_NODShiLtJ_T0042986.1 MGP_NODShiLtJ_G0022378.1 mouse_genomes_project 16 11965680 12016715 + MGP_NODShiLtJ_P0042986 A630010A05Rik protein_coding protein_coding MGP_NODShiLtJ_T0042987.1 MGP_NODShiLtJ_G0022378.1 mouse_genomes_project 16 11975843 12016737 + MGP_NODShiLtJ_P0042987 A630010A05Rik protein_coding protein_coding MGP_NODShiLtJ_T0042988.1 MGP_NODShiLtJ_G0022378.1 mouse_genomes_project 16 11983917 12016723 + MGP_NODShiLtJ_P0042988 A630010A05Rik protein_coding protein_coding MGP_NODShiLtJ_T0043247.1 MGP_NODShiLtJ_G0022433.1 mouse_genomes_project 16 15938897 15965836 + MGP_NODShiLtJ_P0043247 Rtn4r protein_coding protein_coding MGP_NODShiLtJ_T0000936.1 MGP_NODShiLtJ_G0000864.1 mouse_genomes_project 16 44206175 44206522 - TEC TEC MGP_NODShiLtJ_T0044513.1 MGP_NODShiLtJ_G0022762.1 mouse_genomes_project 16 67683081 67739871 - MGP_NODShiLtJ_P0044513 Nsun3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044514.1 MGP_NODShiLtJ_G0022762.1 mouse_genomes_project 16 67683081 67739871 - MGP_NODShiLtJ_P0044514 Nsun3 protein_coding protein_coding MGP_NODShiLtJ_T0044515.1 MGP_NODShiLtJ_G0022762.1 mouse_genomes_project 16 67685797 67720217 - Nsun3 protein_coding processed_transcript MGP_NODShiLtJ_T0044516.1 MGP_NODShiLtJ_G0022762.1 mouse_genomes_project 16 67723785 67739860 - MGP_NODShiLtJ_P0044516 Nsun3 protein_coding protein_coding MGP_NODShiLtJ_T0044517.1 MGP_NODShiLtJ_G0022762.1 mouse_genomes_project 16 67729259 67739912 - Nsun3 protein_coding processed_transcript MGP_NODShiLtJ_T0044518.1 MGP_NODShiLtJ_G0022762.1 mouse_genomes_project 16 67732344 67739807 - Nsun3 protein_coding processed_transcript MGP_NODShiLtJ_T0045065.1 MGP_NODShiLtJ_G0022916.1 mouse_genomes_project 16 109525152 109586831 + MGP_NODShiLtJ_P0045065 Pcp4 protein_coding protein_coding MGP_NODShiLtJ_T0097967.1 MGP_NODShiLtJ_G0036379.1 mouse_genomes_project 16 96392333 96392431 + Gm25908 rRNA rRNA MGP_NODShiLtJ_T0042998.1 MGP_NODShiLtJ_G0022385.1 mouse_genomes_project 16 13416788 13722648 - MGP_NODShiLtJ_P0042998 Spidr protein_coding protein_coding MGP_NODShiLtJ_T0044665.1 MGP_NODShiLtJ_G0022811.1 mouse_genomes_project 16 99992614 100168988 - MGP_NODShiLtJ_P0044665 Grik1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044666.1 MGP_NODShiLtJ_G0022811.1 mouse_genomes_project 16 99992614 100168372 - MGP_NODShiLtJ_P0044666 Grik1 protein_coding protein_coding MGP_NODShiLtJ_T0044667.1 MGP_NODShiLtJ_G0022811.1 mouse_genomes_project 16 99992614 100193948 - MGP_NODShiLtJ_P0044667 Grik1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044668.1 MGP_NODShiLtJ_G0022811.1 mouse_genomes_project 16 99992614 100168372 - MGP_NODShiLtJ_P0044668 Grik1 protein_coding protein_coding MGP_NODShiLtJ_T0044669.1 MGP_NODShiLtJ_G0022811.1 mouse_genomes_project 16 100009617 100168372 - MGP_NODShiLtJ_P0044669 Grik1 protein_coding protein_coding MGP_NODShiLtJ_T0100239.1 MGP_NODShiLtJ_G0038633.1 mouse_genomes_project 16 99578533 99578669 - Gm24891 snoRNA snoRNA MGP_NODShiLtJ_T0000041.1 MGP_NODShiLtJ_G0000034.1 mouse_genomes_project 16 17129139 17129177 - MGP_NODShiLtJ_P0000041 Iglj2 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0017347.1 MGP_NODShiLtJ_G0015182.1 mouse_genomes_project 16 16257278 16264000 + Gm15764 processed_transcript antisense MGP_NODShiLtJ_T0017348.1 MGP_NODShiLtJ_G0015182.1 mouse_genomes_project 16 16257481 16263369 + Gm15764 processed_transcript retained_intron MGP_NODShiLtJ_T0010036.1 MGP_NODShiLtJ_G0008169.1 mouse_genomes_project 16 23395918 23396004 + Mir28a miRNA miRNA MGP_NODShiLtJ_T0097768.1 MGP_NODShiLtJ_G0036180.1 mouse_genomes_project 16 13414847 13416028 + pseudogene pseudogene MGP_NODShiLtJ_T0043710.1 MGP_NODShiLtJ_G0022548.1 mouse_genomes_project 16 30620792 30639364 - MGP_NODShiLtJ_P0043710 Apod protein_coding protein_coding MGP_NODShiLtJ_T0043711.1 MGP_NODShiLtJ_G0022548.1 mouse_genomes_project 16 30621648 30639360 - MGP_NODShiLtJ_P0043711 Apod protein_coding protein_coding MGP_NODShiLtJ_T0043712.1 MGP_NODShiLtJ_G0022548.1 mouse_genomes_project 16 30621682 30639150 - Apod protein_coding retained_intron MGP_NODShiLtJ_T0043713.1 MGP_NODShiLtJ_G0022548.1 mouse_genomes_project 16 30621944 30627985 - Apod protein_coding retained_intron MGP_NODShiLtJ_T0043714.1 MGP_NODShiLtJ_G0022548.1 mouse_genomes_project 16 30622037 30628218 - Apod protein_coding retained_intron MGP_NODShiLtJ_T0043715.1 MGP_NODShiLtJ_G0022548.1 mouse_genomes_project 16 30628044 30635904 - Apod protein_coding retained_intron MGP_NODShiLtJ_T0006813.1 MGP_NODShiLtJ_G0005608.1 mouse_genomes_project 16 99870946 99881071 + 2810407A14Rik lincRNA lincRNA MGP_NODShiLtJ_T0006814.1 MGP_NODShiLtJ_G0005608.1 mouse_genomes_project 16 99874438 99931013 + 2810407A14Rik lincRNA lincRNA MGP_NODShiLtJ_T0043678.1 MGP_NODShiLtJ_G0022538.1 mouse_genomes_project 16 29493695 29506027 - MGP_NODShiLtJ_P0043678 Cpn2 protein_coding protein_coding MGP_NODShiLtJ_T0043753.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31471815 31486778 - MGP_NODShiLtJ_P0043753 Pigx protein_coding protein_coding MGP_NODShiLtJ_T0043754.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31471817 31475553 - Pigx protein_coding processed_transcript MGP_NODShiLtJ_T0043755.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31471821 31486755 - Pigx protein_coding processed_transcript MGP_NODShiLtJ_T0043756.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31471821 31486789 - MGP_NODShiLtJ_P0043756 Pigx protein_coding protein_coding MGP_NODShiLtJ_T0043757.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31471835 31486779 - MGP_NODShiLtJ_P0043757 Pigx protein_coding protein_coding MGP_NODShiLtJ_T0043758.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31471856 31486758 - MGP_NODShiLtJ_P0043758 Pigx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043759.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31472685 31486744 - MGP_NODShiLtJ_P0043759 Pigx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043760.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31474693 31486747 - MGP_NODShiLtJ_P0043760 Pigx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043761.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31474899 31486751 - MGP_NODShiLtJ_P0043761 Pigx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043762.1 MGP_NODShiLtJ_G0022557.1 mouse_genomes_project 16 31484438 31486762 - MGP_NODShiLtJ_P0043762 Pigx protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010037.1 MGP_NODShiLtJ_G0008170.1 mouse_genomes_project 16 27724467 27724576 - Mir690 miRNA miRNA MGP_NODShiLtJ_T0044834.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104346019 104388075 - MGP_NODShiLtJ_P0044834 Cryzl1 protein_coding protein_coding MGP_NODShiLtJ_T0044835.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104346039 104387902 - MGP_NODShiLtJ_P0044835 Cryzl1 protein_coding protein_coding MGP_NODShiLtJ_T0044836.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104346223 104349949 - Cryzl1 protein_coding processed_transcript MGP_NODShiLtJ_T0044837.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104346303 104387723 - MGP_NODShiLtJ_P0044837 Cryzl1 protein_coding protein_coding MGP_NODShiLtJ_T0044838.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104349117 104368040 - MGP_NODShiLtJ_P0044838 Cryzl1 protein_coding protein_coding MGP_NODShiLtJ_T0044839.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104349143 104376528 - MGP_NODShiLtJ_P0044839 Cryzl1 protein_coding protein_coding MGP_NODShiLtJ_T0044840.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104351174 104387801 - MGP_NODShiLtJ_P0044840 Cryzl1 protein_coding protein_coding MGP_NODShiLtJ_T0044841.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104351427 104356059 - Cryzl1 protein_coding retained_intron MGP_NODShiLtJ_T0044842.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104366185 104387700 - Cryzl1 protein_coding retained_intron MGP_NODShiLtJ_T0044843.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104373506 104387698 - Cryzl1 protein_coding retained_intron MGP_NODShiLtJ_T0044844.1 MGP_NODShiLtJ_G0022878.1 mouse_genomes_project 16 104374184 104387708 - Cryzl1 protein_coding processed_transcript MGP_NODShiLtJ_T0006767.1 MGP_NODShiLtJ_G0005573.1 mouse_genomes_project 16 10774282 10780575 - 2310015D24Rik lincRNA lincRNA MGP_NODShiLtJ_T0006768.1 MGP_NODShiLtJ_G0005573.1 mouse_genomes_project 16 10779348 10781263 - 2310015D24Rik lincRNA lincRNA MGP_NODShiLtJ_T0043055.1 MGP_NODShiLtJ_G0022395.1 mouse_genomes_project 16 14673858 14746282 + MGP_NODShiLtJ_P0043055 Mapk1 protein_coding protein_coding MGP_NODShiLtJ_T0043056.1 MGP_NODShiLtJ_G0022395.1 mouse_genomes_project 16 14673858 14743578 + MGP_NODShiLtJ_P0043056 Mapk1 protein_coding protein_coding MGP_NODShiLtJ_T0043057.1 MGP_NODShiLtJ_G0022395.1 mouse_genomes_project 16 14674043 14736996 + MGP_NODShiLtJ_P0043057 Mapk1 protein_coding protein_coding MGP_NODShiLtJ_T0043058.1 MGP_NODShiLtJ_G0022395.1 mouse_genomes_project 16 14715668 14721311 + Mapk1 protein_coding retained_intron MGP_NODShiLtJ_T0043059.1 MGP_NODShiLtJ_G0022395.1 mouse_genomes_project 16 14723281 14724450 + Mapk1 protein_coding retained_intron MGP_NODShiLtJ_T0043060.1 MGP_NODShiLtJ_G0022395.1 mouse_genomes_project 16 14723621 14742692 + MGP_NODShiLtJ_P0043060 Mapk1 protein_coding protein_coding MGP_NODShiLtJ_T0043061.1 MGP_NODShiLtJ_G0022395.1 mouse_genomes_project 16 14733293 14736661 + Mapk1 protein_coding processed_transcript MGP_NODShiLtJ_T0043062.1 MGP_NODShiLtJ_G0022395.1 mouse_genomes_project 16 14733504 14743039 + Mapk1 protein_coding processed_transcript MGP_NODShiLtJ_T0011294.1 MGP_NODShiLtJ_G0009427.1 mouse_genomes_project 16 5238593 5238882 - Gm25782 misc_RNA misc_RNA MGP_NODShiLtJ_T0044471.1 MGP_NODShiLtJ_G0022742.1 mouse_genomes_project 16 62487962 62489066 - MGP_NODShiLtJ_P0044471 Olfr181 protein_coding protein_coding MGP_NODShiLtJ_T0044472.1 MGP_NODShiLtJ_G0022742.1 mouse_genomes_project 16 62487962 62490653 - MGP_NODShiLtJ_P0044472 Olfr181 protein_coding protein_coding MGP_NODShiLtJ_T0044473.1 MGP_NODShiLtJ_G0022742.1 mouse_genomes_project 16 62488590 62490653 - MGP_NODShiLtJ_P0044473 Olfr181 protein_coding protein_coding MGP_NODShiLtJ_T0044474.1 MGP_NODShiLtJ_G0022742.1 mouse_genomes_project 16 62488738 62490617 - MGP_NODShiLtJ_P0044474 Olfr181 protein_coding protein_coding MGP_NODShiLtJ_T0098970.1 MGP_NODShiLtJ_G0037364.1 mouse_genomes_project 16 58967543 58967643 - Gm26369 snRNA snRNA MGP_NODShiLtJ_T0003610.1 MGP_NODShiLtJ_G0003265.1 mouse_genomes_project 16 32090918 32093893 - Tnk2os antisense antisense MGP_NODShiLtJ_T0098982.1 MGP_NODShiLtJ_G0037376.1 mouse_genomes_project 16 104731033 104731131 + Gm23210 snRNA snRNA MGP_NODShiLtJ_T0013050.1 MGP_NODShiLtJ_G0011158.1 mouse_genomes_project 16 46289774 46290176 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100223.1 MGP_NODShiLtJ_G0038617.1 mouse_genomes_project 16 61342011 61342143 - Gm24039 snoRNA snoRNA MGP_NODShiLtJ_T0044452.1 MGP_NODShiLtJ_G0022733.1 mouse_genomes_project 16 62211940 62226722 + MGP_NODShiLtJ_P0044452 Cpox protein_coding protein_coding MGP_NODShiLtJ_T0044567.1 MGP_NODShiLtJ_G0022781.1 mouse_genomes_project 16 84477475 84488581 + MGP_NODShiLtJ_P0044567 Rbm11 protein_coding protein_coding MGP_NODShiLtJ_T0044568.1 MGP_NODShiLtJ_G0022781.1 mouse_genomes_project 16 84477475 84487369 + MGP_NODShiLtJ_P0044568 Rbm11 protein_coding protein_coding MGP_NODShiLtJ_T0044569.1 MGP_NODShiLtJ_G0022781.1 mouse_genomes_project 16 84477522 84488577 + MGP_NODShiLtJ_P0044569 Rbm11 protein_coding protein_coding MGP_NODShiLtJ_T0098964.1 MGP_NODShiLtJ_G0037358.1 mouse_genomes_project 16 47170306 47170413 - Gm24754 snRNA snRNA MGP_NODShiLtJ_T0013068.1 MGP_NODShiLtJ_G0011176.1 mouse_genomes_project 16 70375045 70375966 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043126.1 MGP_NODShiLtJ_G0022407.1 mouse_genomes_project 16 15057451 15069656 + MGP_NODShiLtJ_P0043126 Serpind1 protein_coding protein_coding MGP_NODShiLtJ_T0043127.1 MGP_NODShiLtJ_G0022407.1 mouse_genomes_project 16 15057463 15069655 + MGP_NODShiLtJ_P0043127 Serpind1 protein_coding protein_coding MGP_NODShiLtJ_T0042741.1 MGP_NODShiLtJ_G0022315.1 mouse_genomes_project 16 1641414 1690662 - MGP_NODShiLtJ_P0042741 Ppl protein_coding protein_coding MGP_NODShiLtJ_T0043497.1 MGP_NODShiLtJ_G0022484.1 mouse_genomes_project 16 18841199 18846570 + MGP_NODShiLtJ_P0043497 Polr2h protein_coding protein_coding MGP_NODShiLtJ_T0043498.1 MGP_NODShiLtJ_G0022484.1 mouse_genomes_project 16 18841706 18846310 + Polr2h protein_coding processed_transcript MGP_NODShiLtJ_T0044216.1 MGP_NODShiLtJ_G0022668.1 mouse_genomes_project 16 45746566 45759548 + MGP_NODShiLtJ_P0044216 Nepro protein_coding protein_coding MGP_NODShiLtJ_T0044217.1 MGP_NODShiLtJ_G0022668.1 mouse_genomes_project 16 45746622 45753628 + MGP_NODShiLtJ_P0044217 Nepro protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044218.1 MGP_NODShiLtJ_G0022668.1 mouse_genomes_project 16 45746622 45758837 + MGP_NODShiLtJ_P0044218 Nepro protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044219.1 MGP_NODShiLtJ_G0022668.1 mouse_genomes_project 16 45748432 45756393 + Nepro protein_coding retained_intron MGP_NODShiLtJ_T0044220.1 MGP_NODShiLtJ_G0022668.1 mouse_genomes_project 16 45749384 45756990 + MGP_NODShiLtJ_P0044220 Nepro protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044286.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46879333 46986266 - MGP_NODShiLtJ_P0044286 Phldb2 protein_coding protein_coding MGP_NODShiLtJ_T0044287.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46879484 46986122 - MGP_NODShiLtJ_P0044287 Phldb2 protein_coding protein_coding MGP_NODShiLtJ_T0044288.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46880247 46939849 - MGP_NODShiLtJ_P0044288 Phldb2 protein_coding protein_coding MGP_NODShiLtJ_T0044289.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46880878 46965112 - MGP_NODShiLtJ_P0044289 Phldb2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044290.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46889977 47102245 - MGP_NODShiLtJ_P0044290 Phldb2 protein_coding protein_coding MGP_NODShiLtJ_T0044291.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46896898 46907591 - Phldb2 protein_coding processed_transcript MGP_NODShiLtJ_T0044292.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46913020 46925390 - Phldb2 protein_coding processed_transcript MGP_NODShiLtJ_T0044293.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46916531 46928859 - MGP_NODShiLtJ_P0044293 Phldb2 protein_coding protein_coding MGP_NODShiLtJ_T0044294.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46964835 47102140 - MGP_NODShiLtJ_P0044294 Phldb2 protein_coding protein_coding MGP_NODShiLtJ_T0044295.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 46965004 46986231 - Phldb2 protein_coding processed_transcript MGP_NODShiLtJ_T0044296.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 47047438 47048365 - Phldb2 protein_coding processed_transcript MGP_NODShiLtJ_T0044297.1 MGP_NODShiLtJ_G0022686.1 mouse_genomes_project 16 47047629 47102180 - Phldb2 protein_coding processed_transcript MGP_NODShiLtJ_T0100209.1 MGP_NODShiLtJ_G0038603.1 mouse_genomes_project 16 35102914 35103117 + Gm25079 snoRNA snoRNA MGP_NODShiLtJ_T0044570.1 MGP_NODShiLtJ_G0022782.1 mouse_genomes_project 16 84649162 84661685 - MGP_NODShiLtJ_P0044570 Hspa13 protein_coding protein_coding MGP_NODShiLtJ_T0044571.1 MGP_NODShiLtJ_G0022782.1 mouse_genomes_project 16 84651475 84661655 - MGP_NODShiLtJ_P0044571 Hspa13 protein_coding protein_coding MGP_NODShiLtJ_T0044572.1 MGP_NODShiLtJ_G0022782.1 mouse_genomes_project 16 84654051 84661646 - Hspa13 protein_coding retained_intron MGP_NODShiLtJ_T0043978.1 MGP_NODShiLtJ_G0022614.1 mouse_genomes_project 16 36128644 36178100 - protein_coding retained_intron MGP_NODShiLtJ_T0044368.1 MGP_NODShiLtJ_G0022711.1 mouse_genomes_project 16 59183128 59189962 + MGP_NODShiLtJ_P0044368 Rpl24 protein_coding protein_coding MGP_NODShiLtJ_T0044369.1 MGP_NODShiLtJ_G0022711.1 mouse_genomes_project 16 59183274 59189962 + Rpl24 protein_coding processed_transcript MGP_NODShiLtJ_T0044370.1 MGP_NODShiLtJ_G0022711.1 mouse_genomes_project 16 59183889 59188310 + Rpl24 protein_coding retained_intron MGP_NODShiLtJ_T0044371.1 MGP_NODShiLtJ_G0022711.1 mouse_genomes_project 16 59188530 59189962 + Rpl24 protein_coding retained_intron MGP_NODShiLtJ_T0043343.1 MGP_NODShiLtJ_G0022453.1 mouse_genomes_project 16 16773625 16778406 - MGP_NODShiLtJ_P0043343 Mrpl40 protein_coding protein_coding MGP_NODShiLtJ_T0043344.1 MGP_NODShiLtJ_G0022453.1 mouse_genomes_project 16 16773833 16778178 - MGP_NODShiLtJ_P0043344 Mrpl40 protein_coding protein_coding MGP_NODShiLtJ_T0042682.1 MGP_NODShiLtJ_G0022300.1 mouse_genomes_project 16 1154850 1202138 + Dnaja3 protein_coding processed_transcript MGP_NODShiLtJ_T0042686.1 MGP_NODShiLtJ_G0022300.1 mouse_genomes_project 16 1198991 1228146 + MGP_NODShiLtJ_P0042686 Dnaja3 protein_coding protein_coding MGP_NODShiLtJ_T0042687.1 MGP_NODShiLtJ_G0022300.1 mouse_genomes_project 16 1199017 1228146 + MGP_NODShiLtJ_P0042687 Dnaja3 protein_coding protein_coding MGP_NODShiLtJ_T0042688.1 MGP_NODShiLtJ_G0022300.1 mouse_genomes_project 16 1199035 1213032 + Dnaja3 protein_coding retained_intron MGP_NODShiLtJ_T0013031.1 MGP_NODShiLtJ_G0011139.1 mouse_genomes_project 16 22233750 22235337 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043212.1 MGP_NODShiLtJ_G0022422.1 mouse_genomes_project 16 15616070 15673112 - MGP_NODShiLtJ_P0043212 Gm20518 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043674.1 MGP_NODShiLtJ_G0022537.1 mouse_genomes_project 16 29287439 29288625 + Hes1 protein_coding processed_transcript MGP_NODShiLtJ_T0043675.1 MGP_NODShiLtJ_G0022537.1 mouse_genomes_project 16 29288395 29290852 + MGP_NODShiLtJ_P0043675 Hes1 protein_coding protein_coding MGP_NODShiLtJ_T0043676.1 MGP_NODShiLtJ_G0022537.1 mouse_genomes_project 16 29289152 29290179 + Hes1 protein_coding retained_intron MGP_NODShiLtJ_T0043677.1 MGP_NODShiLtJ_G0022537.1 mouse_genomes_project 16 29289393 29290375 + Hes1 protein_coding processed_transcript MGP_NODShiLtJ_T0044493.1 MGP_NODShiLtJ_G0022756.1 mouse_genomes_project 16 63090559 63091477 - MGP_NODShiLtJ_P0044493 Olfr209 protein_coding protein_coding MGP_NODShiLtJ_T0044138.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 43714297 43917840 + Zbtb20 protein_coding processed_transcript MGP_NODShiLtJ_T0044139.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 43714447 44487617 + Zbtb20 protein_coding processed_transcript MGP_NODShiLtJ_T0044140.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 43714550 44495437 + MGP_NODShiLtJ_P0044140 Zbtb20 protein_coding protein_coding MGP_NODShiLtJ_T0044141.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 43714557 44377427 + Zbtb20 protein_coding retained_intron MGP_NODShiLtJ_T0044142.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44114781 44527723 + MGP_NODShiLtJ_P0044142 Zbtb20 protein_coding protein_coding MGP_NODShiLtJ_T0044143.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44114940 44201415 + Zbtb20 protein_coding retained_intron MGP_NODShiLtJ_T0044144.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44272651 44487597 + Zbtb20 protein_coding processed_transcript MGP_NODShiLtJ_T0044145.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44273067 44496463 + Zbtb20 protein_coding retained_intron MGP_NODShiLtJ_T0044146.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44273481 44527670 + MGP_NODShiLtJ_P0044146 Zbtb20 protein_coding protein_coding MGP_NODShiLtJ_T0044147.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44273812 44527677 + MGP_NODShiLtJ_P0044147 Zbtb20 protein_coding protein_coding MGP_NODShiLtJ_T0044148.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44420755 44494905 + MGP_NODShiLtJ_P0044148 Zbtb20 protein_coding protein_coding MGP_NODShiLtJ_T0044149.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44420763 44489611 + MGP_NODShiLtJ_P0044149 Zbtb20 protein_coding protein_coding MGP_NODShiLtJ_T0044150.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44420783 44527912 + MGP_NODShiLtJ_P0044150 Zbtb20 protein_coding protein_coding MGP_NODShiLtJ_T0044151.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44420838 44494886 + Zbtb20 protein_coding processed_transcript MGP_NODShiLtJ_T0044152.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44425264 44487617 + Zbtb20 protein_coding processed_transcript MGP_NODShiLtJ_T0044153.1 MGP_NODShiLtJ_G0022654.1 mouse_genomes_project 16 44486037 44542260 + MGP_NODShiLtJ_P0044153 Zbtb20 protein_coding protein_coding MGP_NODShiLtJ_T0098485.1 MGP_NODShiLtJ_G0036881.1 mouse_genomes_project 16 105200334 105221134 + 2410124H12Rik sense_overlapping sense_overlapping MGP_NODShiLtJ_T0044519.1 MGP_NODShiLtJ_G0022763.1 mouse_genomes_project 16 67746981 67805455 - MGP_NODShiLtJ_P0044519 Arl13b protein_coding protein_coding MGP_NODShiLtJ_T0044520.1 MGP_NODShiLtJ_G0022763.1 mouse_genomes_project 16 67748687 67756282 - Arl13b protein_coding processed_transcript MGP_NODShiLtJ_T0044522.1 MGP_NODShiLtJ_G0022763.1 mouse_genomes_project 16 67781362 67805455 - Arl13b protein_coding retained_intron MGP_NODShiLtJ_T0044712.1 MGP_NODShiLtJ_G0022850.1 mouse_genomes_project 16 101928995 101929615 - MGP_NODShiLtJ_P0044712 Krtap7-1 protein_coding protein_coding MGP_NODShiLtJ_T0010067.1 MGP_NODShiLtJ_G0008200.1 mouse_genomes_project 16 104169310 104169412 - Mir6367 miRNA miRNA MGP_NODShiLtJ_T0044676.1 MGP_NODShiLtJ_G0022818.1 mouse_genomes_project 16 100885866 100886660 - MGP_NODShiLtJ_P0044676 2310061N02Rik protein_coding protein_coding MGP_NODShiLtJ_T0044349.1 MGP_NODShiLtJ_G0022704.1 mouse_genomes_project 16 52523089 52524385 - MGP_NODShiLtJ_P0044349 Ccdc54 protein_coding protein_coding MGP_NODShiLtJ_T0044416.1 MGP_NODShiLtJ_G0022721.1 mouse_genomes_project 16 60419288 60452894 - MGP_NODShiLtJ_P0044416 Tmem45a2 protein_coding protein_coding MGP_NODShiLtJ_T0098983.1 MGP_NODShiLtJ_G0037377.1 mouse_genomes_project 16 107318916 107319076 + Gm23692 snRNA snRNA MGP_NODShiLtJ_T0043680.1 MGP_NODShiLtJ_G0022540.1 mouse_genomes_project 16 29546339 29549434 - MGP_NODShiLtJ_P0043680 Gp5 protein_coding protein_coding MGP_NODShiLtJ_T0043011.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14019690 14187311 - MGP_NODShiLtJ_P0043011 Fgd4 protein_coding protein_coding MGP_NODShiLtJ_T0043012.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14035966 14238668 - MGP_NODShiLtJ_P0043012 Fgd4 protein_coding protein_coding MGP_NODShiLtJ_T0043013.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14036005 14153187 - MGP_NODShiLtJ_P0043013 Fgd4 protein_coding protein_coding MGP_NODShiLtJ_T0043014.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14074811 14187303 - Fgd4 protein_coding retained_intron MGP_NODShiLtJ_T0043015.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14076416 14187303 - Fgd4 protein_coding retained_intron MGP_NODShiLtJ_T0043016.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14091077 14239239 - MGP_NODShiLtJ_P0043016 Fgd4 protein_coding protein_coding MGP_NODShiLtJ_T0043017.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14105951 14187082 - Fgd4 protein_coding retained_intron MGP_NODShiLtJ_T0043018.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14116099 14238729 - Fgd4 protein_coding retained_intron MGP_NODShiLtJ_T0043019.1 MGP_NODShiLtJ_G0022389.1 mouse_genomes_project 16 14117078 14153187 - Fgd4 protein_coding retained_intron MGP_NODShiLtJ_T0098938.1 MGP_NODShiLtJ_G0037332.1 mouse_genomes_project 16 15067986 15068093 - Gm24927 snRNA snRNA MGP_NODShiLtJ_T0045089.1 MGP_NODShiLtJ_G0022925.1 mouse_genomes_project 16 111092828 111108022 - MGP_NODShiLtJ_P0045089 Zbtb21 protein_coding protein_coding MGP_NODShiLtJ_T0045090.1 MGP_NODShiLtJ_G0022925.1 mouse_genomes_project 16 111092828 111108022 - MGP_NODShiLtJ_P0045090 Zbtb21 protein_coding protein_coding MGP_NODShiLtJ_T0045091.1 MGP_NODShiLtJ_G0022925.1 mouse_genomes_project 16 111092828 111108022 - MGP_NODShiLtJ_P0045091 Zbtb21 protein_coding protein_coding MGP_NODShiLtJ_T0013020.1 MGP_NODShiLtJ_G0011128.1 mouse_genomes_project 16 16924083 16924731 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044730.1 MGP_NODShiLtJ_G0022854.1 mouse_genomes_project 16 102725351 102783577 - MGP_NODShiLtJ_P0044730 Scaf4 protein_coding protein_coding MGP_NODShiLtJ_T0044731.1 MGP_NODShiLtJ_G0022854.1 mouse_genomes_project 16 102725550 102783694 - MGP_NODShiLtJ_P0044731 Scaf4 protein_coding protein_coding MGP_NODShiLtJ_T0006779.1 MGP_NODShiLtJ_G0005582.1 mouse_genomes_project 16 23639676 23649097 + A230028O05Rik lincRNA lincRNA MGP_NODShiLtJ_T0043022.1 MGP_NODShiLtJ_G0022391.1 mouse_genomes_project 16 14420366 14478865 - MGP_NODShiLtJ_P0043022 Spag6l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043023.1 MGP_NODShiLtJ_G0022391.1 mouse_genomes_project 16 14420373 14512597 - MGP_NODShiLtJ_P0043023 Spag6l protein_coding protein_coding MGP_NODShiLtJ_T0043024.1 MGP_NODShiLtJ_G0022391.1 mouse_genomes_project 16 14436629 14512604 - Spag6l protein_coding retained_intron MGP_NODShiLtJ_T0043025.1 MGP_NODShiLtJ_G0022391.1 mouse_genomes_project 16 14461193 14512565 - Spag6l protein_coding processed_transcript MGP_NODShiLtJ_T0043026.1 MGP_NODShiLtJ_G0022391.1 mouse_genomes_project 16 14461227 14512628 - Spag6l protein_coding processed_transcript MGP_NODShiLtJ_T0043027.1 MGP_NODShiLtJ_G0022391.1 mouse_genomes_project 16 14498482 14512740 - Spag6l protein_coding processed_transcript MGP_NODShiLtJ_T0043028.1 MGP_NODShiLtJ_G0022391.1 mouse_genomes_project 16 14498754 14512597 - Spag6l protein_coding processed_transcript MGP_NODShiLtJ_T0043029.1 MGP_NODShiLtJ_G0022391.1 mouse_genomes_project 16 14504046 14512591 - Spag6l protein_coding processed_transcript MGP_NODShiLtJ_T0043850.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32391264 32509240 + MGP_NODShiLtJ_P0043850 Lrch3 protein_coding protein_coding MGP_NODShiLtJ_T0043851.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32391286 32506736 + MGP_NODShiLtJ_P0043851 Lrch3 protein_coding protein_coding MGP_NODShiLtJ_T0043852.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32391286 32506736 + MGP_NODShiLtJ_P0043852 Lrch3 protein_coding protein_coding MGP_NODShiLtJ_T0043853.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32391287 32482069 + Lrch3 protein_coding retained_intron MGP_NODShiLtJ_T0043854.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32391291 32466964 + MGP_NODShiLtJ_P0043854 Lrch3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043855.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32391306 32506292 + MGP_NODShiLtJ_P0043855 Lrch3 protein_coding protein_coding MGP_NODShiLtJ_T0043856.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32391306 32506083 + MGP_NODShiLtJ_P0043856 Lrch3 protein_coding protein_coding MGP_NODShiLtJ_T0043857.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32445922 32454461 + Lrch3 protein_coding processed_transcript MGP_NODShiLtJ_T0043858.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32472416 32491611 + MGP_NODShiLtJ_P0043858 Lrch3 protein_coding protein_coding MGP_NODShiLtJ_T0043859.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32472444 32491553 + MGP_NODShiLtJ_P0043859 Lrch3 protein_coding protein_coding MGP_NODShiLtJ_T0043860.1 MGP_NODShiLtJ_G0022578.1 mouse_genomes_project 16 32479026 32491664 + MGP_NODShiLtJ_P0043860 Lrch3 protein_coding protein_coding MGP_NODShiLtJ_T0098947.1 MGP_NODShiLtJ_G0037341.1 mouse_genomes_project 16 24372476 24372583 - Gm24928 snRNA snRNA MGP_NODShiLtJ_T0043984.1 MGP_NODShiLtJ_G0022617.1 mouse_genomes_project 16 36450605 36518203 - MGP_NODShiLtJ_P0043984 Cd86 protein_coding protein_coding MGP_NODShiLtJ_T0043985.1 MGP_NODShiLtJ_G0022617.1 mouse_genomes_project 16 36450633 36451256 - Cd86 protein_coding processed_transcript MGP_NODShiLtJ_T0043986.1 MGP_NODShiLtJ_G0022617.1 mouse_genomes_project 16 36468031 36490093 - MGP_NODShiLtJ_P0043986 Cd86 protein_coding protein_coding MGP_NODShiLtJ_T0043987.1 MGP_NODShiLtJ_G0022617.1 mouse_genomes_project 16 36512934 36518207 - Cd86 protein_coding processed_transcript MGP_NODShiLtJ_T0098971.1 MGP_NODShiLtJ_G0037365.1 mouse_genomes_project 16 67521993 67522097 + Gm24164 snRNA snRNA MGP_NODShiLtJ_T0044705.1 MGP_NODShiLtJ_G0022843.1 mouse_genomes_project 16 101464883 101465280 + MGP_NODShiLtJ_P0044705 Gm9789 protein_coding protein_coding MGP_NODShiLtJ_T0043621.1 MGP_NODShiLtJ_G0022521.1 mouse_genomes_project 16 24645703 24804825 - MGP_NODShiLtJ_P0043621 P3h2 protein_coding protein_coding MGP_NODShiLtJ_T0043622.1 MGP_NODShiLtJ_G0022521.1 mouse_genomes_project 16 24658689 24672688 - P3h2 protein_coding retained_intron MGP_NODShiLtJ_T0043623.1 MGP_NODShiLtJ_G0022521.1 mouse_genomes_project 16 24673017 24680305 - P3h2 protein_coding processed_transcript MGP_NODShiLtJ_T0043883.1 MGP_NODShiLtJ_G0022586.1 mouse_genomes_project 16 33290648 33333203 + Heg1 protein_coding retained_intron MGP_NODShiLtJ_T0043884.1 MGP_NODShiLtJ_G0022586.1 mouse_genomes_project 16 33290648 33384617 + MGP_NODShiLtJ_P0043884 Heg1 protein_coding protein_coding MGP_NODShiLtJ_T0043885.1 MGP_NODShiLtJ_G0022586.1 mouse_genomes_project 16 33290727 33382484 + MGP_NODShiLtJ_P0043885 Heg1 protein_coding protein_coding MGP_NODShiLtJ_T0043886.1 MGP_NODShiLtJ_G0022586.1 mouse_genomes_project 16 33290794 33384598 + MGP_NODShiLtJ_P0043886 Heg1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043887.1 MGP_NODShiLtJ_G0022586.1 mouse_genomes_project 16 33342890 33351561 + Heg1 protein_coding processed_transcript MGP_NODShiLtJ_T0043888.1 MGP_NODShiLtJ_G0022586.1 mouse_genomes_project 16 33365231 33374054 + Heg1 protein_coding retained_intron MGP_NODShiLtJ_T0043889.1 MGP_NODShiLtJ_G0022586.1 mouse_genomes_project 16 33368659 33381875 + Heg1 protein_coding processed_transcript MGP_NODShiLtJ_T0043890.1 MGP_NODShiLtJ_G0022586.1 mouse_genomes_project 16 33369632 33373900 + Heg1 protein_coding retained_intron MGP_NODShiLtJ_T0044779.1 MGP_NODShiLtJ_G0022864.1 mouse_genomes_project 16 103779274 103782476 - MGP_NODShiLtJ_P0044779 Gm9881 protein_coding protein_coding MGP_NODShiLtJ_T0042762.1 MGP_NODShiLtJ_G0022323.1 mouse_genomes_project 16 5262676 5295289 + MGP_NODShiLtJ_P0042762 Mettl22 protein_coding protein_coding MGP_NODShiLtJ_T0042763.1 MGP_NODShiLtJ_G0022323.1 mouse_genomes_project 16 5262679 5293287 + MGP_NODShiLtJ_P0042763 Mettl22 protein_coding protein_coding MGP_NODShiLtJ_T0042764.1 MGP_NODShiLtJ_G0022323.1 mouse_genomes_project 16 5262692 5288936 + MGP_NODShiLtJ_P0042764 Mettl22 protein_coding protein_coding MGP_NODShiLtJ_T0042765.1 MGP_NODShiLtJ_G0022323.1 mouse_genomes_project 16 5290170 5293448 + Mettl22 protein_coding retained_intron MGP_NODShiLtJ_T0042766.1 MGP_NODShiLtJ_G0022323.1 mouse_genomes_project 16 5291438 5294801 + Mettl22 protein_coding retained_intron MGP_NODShiLtJ_T0000932.1 MGP_NODShiLtJ_G0000860.1 mouse_genomes_project 16 17165398 17168870 + TEC TEC MGP_NODShiLtJ_T0098960.1 MGP_NODShiLtJ_G0037354.1 mouse_genomes_project 16 38093195 38093335 + Gm25140 snRNA snRNA MGP_NODShiLtJ_T0097966.1 MGP_NODShiLtJ_G0036378.1 mouse_genomes_project 16 65759073 65759191 - n-R5s37 rRNA rRNA MGP_NODShiLtJ_T0006771.1 MGP_NODShiLtJ_G0005576.1 mouse_genomes_project 16 17145830 17170844 - Gm43388 lincRNA lincRNA MGP_NODShiLtJ_T0044281.1 MGP_NODShiLtJ_G0022685.1 mouse_genomes_project 16 46863087 46876104 - MGP_NODShiLtJ_P0044281 Abhd10 protein_coding protein_coding MGP_NODShiLtJ_T0044282.1 MGP_NODShiLtJ_G0022685.1 mouse_genomes_project 16 46864909 46876051 - MGP_NODShiLtJ_P0044282 Abhd10 protein_coding protein_coding MGP_NODShiLtJ_T0044283.1 MGP_NODShiLtJ_G0022685.1 mouse_genomes_project 16 46870134 46876034 - Abhd10 protein_coding processed_transcript MGP_NODShiLtJ_T0044284.1 MGP_NODShiLtJ_G0022685.1 mouse_genomes_project 16 46873497 46876056 - Abhd10 protein_coding processed_transcript MGP_NODShiLtJ_T0044285.1 MGP_NODShiLtJ_G0022685.1 mouse_genomes_project 16 46874004 46876049 - Abhd10 protein_coding processed_transcript MGP_NODShiLtJ_T0043865.1 MGP_NODShiLtJ_G0022580.1 mouse_genomes_project 16 32586257 32589984 + MGP_NODShiLtJ_P0043865 Rpl35a protein_coding protein_coding MGP_NODShiLtJ_T0043866.1 MGP_NODShiLtJ_G0022580.1 mouse_genomes_project 16 32586270 32589971 + MGP_NODShiLtJ_P0043866 Rpl35a protein_coding protein_coding MGP_NODShiLtJ_T0043867.1 MGP_NODShiLtJ_G0022580.1 mouse_genomes_project 16 32586286 32589970 + Rpl35a protein_coding retained_intron MGP_NODShiLtJ_T0043868.1 MGP_NODShiLtJ_G0022580.1 mouse_genomes_project 16 32586328 32587335 + Rpl35a protein_coding retained_intron MGP_NODShiLtJ_T0043869.1 MGP_NODShiLtJ_G0022580.1 mouse_genomes_project 16 32586331 32589959 + MGP_NODShiLtJ_P0043869 Rpl35a protein_coding protein_coding MGP_NODShiLtJ_T0043870.1 MGP_NODShiLtJ_G0022580.1 mouse_genomes_project 16 32586610 32589970 + MGP_NODShiLtJ_P0043870 Rpl35a protein_coding protein_coding MGP_NODShiLtJ_T0043871.1 MGP_NODShiLtJ_G0022580.1 mouse_genomes_project 16 32586822 32589950 + MGP_NODShiLtJ_P0043871 Rpl35a protein_coding protein_coding MGP_NODShiLtJ_T0013055.1 MGP_NODShiLtJ_G0011163.1 mouse_genomes_project 16 51101374 51102100 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098283.1 MGP_NODShiLtJ_G0036690.1 mouse_genomes_project 16 1301140 1302854 - Gm15835 sense_intronic sense_intronic MGP_NODShiLtJ_T0097957.1 MGP_NODShiLtJ_G0036369.1 mouse_genomes_project 16 1909422 1909544 - n-R5s30 rRNA rRNA MGP_NODShiLtJ_T0011694.1 MGP_NODShiLtJ_G0009822.1 mouse_genomes_project 16 62687016 62692394 - MGP_NODShiLtJ_P0011694 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0042847.1 MGP_NODShiLtJ_G0022348.1 mouse_genomes_project 16 7872490 7881680 + MGP_NODShiLtJ_P0042847 Rmi2 protein_coding protein_coding MGP_NODShiLtJ_T0042848.1 MGP_NODShiLtJ_G0022348.1 mouse_genomes_project 16 7872499 7937830 + MGP_NODShiLtJ_P0042848 Rmi2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044694.1 MGP_NODShiLtJ_G0022834.1 mouse_genomes_project 16 101283006 101283386 - MGP_NODShiLtJ_P0044694 Krtap22-2 protein_coding protein_coding MGP_NODShiLtJ_T0044425.1 MGP_NODShiLtJ_G0022727.1 mouse_genomes_project 16 60759003 60987020 + MGP_NODShiLtJ_P0044425 Filip1l protein_coding protein_coding MGP_NODShiLtJ_T0044426.1 MGP_NODShiLtJ_G0022727.1 mouse_genomes_project 16 60759187 60928059 + MGP_NODShiLtJ_P0044426 Filip1l protein_coding protein_coding MGP_NODShiLtJ_T0044427.1 MGP_NODShiLtJ_G0022727.1 mouse_genomes_project 16 60962368 60986698 + MGP_NODShiLtJ_P0044427 Filip1l protein_coding protein_coding MGP_NODShiLtJ_T0043213.1 MGP_NODShiLtJ_G0022423.1 mouse_genomes_project 16 15620275 15673095 - protein_coding retained_intron MGP_NODShiLtJ_T0043214.1 MGP_NODShiLtJ_G0022423.1 mouse_genomes_project 16 15621148 15673101 - MGP_NODShiLtJ_P0043214 protein_coding protein_coding MGP_NODShiLtJ_T0043215.1 MGP_NODShiLtJ_G0022423.1 mouse_genomes_project 16 15621148 15673134 - MGP_NODShiLtJ_P0043215 protein_coding protein_coding MGP_NODShiLtJ_T0043216.1 MGP_NODShiLtJ_G0022423.1 mouse_genomes_project 16 15621154 15673098 - MGP_NODShiLtJ_P0043216 protein_coding protein_coding MGP_NODShiLtJ_T0043217.1 MGP_NODShiLtJ_G0022423.1 mouse_genomes_project 16 15622103 15673034 - MGP_NODShiLtJ_P0043217 protein_coding protein_coding MGP_NODShiLtJ_T0043218.1 MGP_NODShiLtJ_G0022423.1 mouse_genomes_project 16 15630104 15673090 - protein_coding retained_intron MGP_NODShiLtJ_T0043219.1 MGP_NODShiLtJ_G0022423.1 mouse_genomes_project 16 15638014 15675540 - protein_coding processed_transcript MGP_NODShiLtJ_T0043220.1 MGP_NODShiLtJ_G0022423.1 mouse_genomes_project 16 15674015 15675586 - protein_coding processed_transcript MGP_NODShiLtJ_T0043788.1 MGP_NODShiLtJ_G0022567.1 mouse_genomes_project 16 31838087 31847359 + Tctex1d2 protein_coding retained_intron MGP_NODShiLtJ_T0043789.1 MGP_NODShiLtJ_G0022567.1 mouse_genomes_project 16 31838101 31847361 + MGP_NODShiLtJ_P0043789 Tctex1d2 protein_coding protein_coding MGP_NODShiLtJ_T0044798.1 MGP_NODShiLtJ_G0022871.1 mouse_genomes_project 16 104190003 104211391 + MGP_NODShiLtJ_P0044798 Ifngr2 protein_coding protein_coding MGP_NODShiLtJ_T0044799.1 MGP_NODShiLtJ_G0022871.1 mouse_genomes_project 16 104190511 104206871 + MGP_NODShiLtJ_P0044799 Ifngr2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044800.1 MGP_NODShiLtJ_G0022871.1 mouse_genomes_project 16 104207544 104211391 + Ifngr2 protein_coding processed_transcript MGP_NODShiLtJ_T0006770.1 MGP_NODShiLtJ_G0005575.1 mouse_genomes_project 16 14977831 14983159 - Gm26635 lincRNA lincRNA MGP_NODShiLtJ_T0045092.1 MGP_NODShiLtJ_G0022926.1 mouse_genomes_project 16 111160544 111160778 + MGP_NODShiLtJ_P0045092 Gm6020 protein_coding protein_coding MGP_NODShiLtJ_T0100194.1 MGP_NODShiLtJ_G0038588.1 mouse_genomes_project 16 10791569 10791693 - Gm25276 snoRNA snoRNA MGP_NODShiLtJ_T0044396.1 MGP_NODShiLtJ_G0022716.1 mouse_genomes_project 16 59468963 59550633 + MGP_NODShiLtJ_P0044396 Impg2 protein_coding protein_coding MGP_NODShiLtJ_T0044397.1 MGP_NODShiLtJ_G0022716.1 mouse_genomes_project 16 59468982 59478932 + Impg2 protein_coding processed_transcript MGP_NODShiLtJ_T0044398.1 MGP_NODShiLtJ_G0022716.1 mouse_genomes_project 16 59468988 59553229 + MGP_NODShiLtJ_P0044398 Impg2 protein_coding protein_coding MGP_NODShiLtJ_T0044399.1 MGP_NODShiLtJ_G0022716.1 mouse_genomes_project 16 59549596 59550513 + Impg2 protein_coding processed_transcript MGP_NODShiLtJ_T0098977.1 MGP_NODShiLtJ_G0037371.1 mouse_genomes_project 16 95763737 95763844 + Gm24508 snRNA snRNA MGP_NODShiLtJ_T0045066.1 MGP_NODShiLtJ_G0022917.1 mouse_genomes_project 16 109655352 110264070 - MGP_NODShiLtJ_P0045066 Dscam protein_coding protein_coding MGP_NODShiLtJ_T0006785.1 MGP_NODShiLtJ_G0005588.1 mouse_genomes_project 16 32962326 32963199 - 1700007L15Rik lincRNA lincRNA MGP_NODShiLtJ_T0010051.1 MGP_NODShiLtJ_G0008184.1 mouse_genomes_project 16 56647697 56647762 + Gm25041 miRNA miRNA MGP_NODShiLtJ_T0044055.1 MGP_NODShiLtJ_G0022629.1 mouse_genomes_project 16 37634728 37693135 + MGP_NODShiLtJ_P0044055 Hgd protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044056.1 MGP_NODShiLtJ_G0022629.1 mouse_genomes_project 16 37635147 37690202 + Hgd protein_coding processed_transcript MGP_NODShiLtJ_T0044057.1 MGP_NODShiLtJ_G0022629.1 mouse_genomes_project 16 37635151 37670309 + Hgd protein_coding retained_intron MGP_NODShiLtJ_T0044058.1 MGP_NODShiLtJ_G0022629.1 mouse_genomes_project 16 37635179 37674444 + Hgd protein_coding processed_transcript MGP_NODShiLtJ_T0044059.1 MGP_NODShiLtJ_G0022629.1 mouse_genomes_project 16 37680029 37690202 + Hgd protein_coding processed_transcript MGP_NODShiLtJ_T0044745.1 MGP_NODShiLtJ_G0022859.1 mouse_genomes_project 16 103381567 103384453 + Eva1c protein_coding processed_transcript MGP_NODShiLtJ_T0044746.1 MGP_NODShiLtJ_G0022859.1 mouse_genomes_project 16 103381567 103476262 + MGP_NODShiLtJ_P0044746 Eva1c protein_coding protein_coding MGP_NODShiLtJ_T0044747.1 MGP_NODShiLtJ_G0022859.1 mouse_genomes_project 16 103385651 103476676 + MGP_NODShiLtJ_P0044747 Eva1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044748.1 MGP_NODShiLtJ_G0022859.1 mouse_genomes_project 16 103385710 103476220 + MGP_NODShiLtJ_P0044748 Eva1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044749.1 MGP_NODShiLtJ_G0022859.1 mouse_genomes_project 16 103385956 103476262 + MGP_NODShiLtJ_P0044749 Eva1c protein_coding protein_coding MGP_NODShiLtJ_T0044750.1 MGP_NODShiLtJ_G0022859.1 mouse_genomes_project 16 103385956 103476262 + MGP_NODShiLtJ_P0044750 Eva1c protein_coding protein_coding MGP_NODShiLtJ_T0044751.1 MGP_NODShiLtJ_G0022859.1 mouse_genomes_project 16 103402489 103457247 + MGP_NODShiLtJ_P0044751 Eva1c protein_coding protein_coding MGP_NODShiLtJ_T0043681.1 MGP_NODShiLtJ_G0022541.1 mouse_genomes_project 16 29551078 29631607 - MGP_NODShiLtJ_P0043681 Atp13a3 protein_coding protein_coding MGP_NODShiLtJ_T0043682.1 MGP_NODShiLtJ_G0022541.1 mouse_genomes_project 16 29551078 29631607 - MGP_NODShiLtJ_P0043682 Atp13a3 protein_coding protein_coding MGP_NODShiLtJ_T0043683.1 MGP_NODShiLtJ_G0022541.1 mouse_genomes_project 16 29596056 29599131 - Atp13a3 protein_coding retained_intron MGP_NODShiLtJ_T0043684.1 MGP_NODShiLtJ_G0022541.1 mouse_genomes_project 16 29604035 29631562 - Atp13a3 protein_coding retained_intron MGP_NODShiLtJ_T0043685.1 MGP_NODShiLtJ_G0022541.1 mouse_genomes_project 16 29628974 29631914 - Atp13a3 protein_coding retained_intron MGP_NODShiLtJ_T0043526.1 MGP_NODShiLtJ_G0022494.1 mouse_genomes_project 16 20236316 20288263 - MGP_NODShiLtJ_P0043526 Liph protein_coding protein_coding MGP_NODShiLtJ_T0043527.1 MGP_NODShiLtJ_G0022494.1 mouse_genomes_project 16 20236316 20288263 - MGP_NODShiLtJ_P0043527 Liph protein_coding protein_coding MGP_NODShiLtJ_T0044025.1 MGP_NODShiLtJ_G0022623.1 mouse_genomes_project 16 36836042 36868835 + MGP_NODShiLtJ_P0044025 Hcls1 protein_coding protein_coding MGP_NODShiLtJ_T0044026.1 MGP_NODShiLtJ_G0022623.1 mouse_genomes_project 16 36838346 36867153 + MGP_NODShiLtJ_P0044026 Hcls1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044027.1 MGP_NODShiLtJ_G0022623.1 mouse_genomes_project 16 36859307 36861192 + Hcls1 protein_coding retained_intron MGP_NODShiLtJ_T0042753.1 MGP_NODShiLtJ_G0022320.1 mouse_genomes_project 16 1807556 1818924 - MGP_NODShiLtJ_P0042753 Eef2kmt protein_coding protein_coding MGP_NODShiLtJ_T0042754.1 MGP_NODShiLtJ_G0022320.1 mouse_genomes_project 16 1808273 1818882 - Eef2kmt protein_coding retained_intron MGP_NODShiLtJ_T0042755.1 MGP_NODShiLtJ_G0022320.1 mouse_genomes_project 16 1810316 1818897 - MGP_NODShiLtJ_P0042755 Eef2kmt protein_coding protein_coding MGP_NODShiLtJ_T0042756.1 MGP_NODShiLtJ_G0022320.1 mouse_genomes_project 16 1810328 1811811 - Eef2kmt protein_coding retained_intron MGP_NODShiLtJ_T0042757.1 MGP_NODShiLtJ_G0022320.1 mouse_genomes_project 16 1812015 1818870 - Eef2kmt protein_coding retained_intron MGP_NODShiLtJ_T0044017.1 MGP_NODShiLtJ_G0022622.1 mouse_genomes_project 16 36775414 36787837 + Golgb1 protein_coding processed_transcript MGP_NODShiLtJ_T0044018.1 MGP_NODShiLtJ_G0022622.1 mouse_genomes_project 16 36775415 36789638 + MGP_NODShiLtJ_P0044018 Golgb1 protein_coding protein_coding MGP_NODShiLtJ_T0044019.1 MGP_NODShiLtJ_G0022622.1 mouse_genomes_project 16 36775415 36775913 + MGP_NODShiLtJ_P0044019 Golgb1 protein_coding protein_coding MGP_NODShiLtJ_T0044020.1 MGP_NODShiLtJ_G0022622.1 mouse_genomes_project 16 36775442 36834148 + MGP_NODShiLtJ_P0044020 Golgb1 protein_coding protein_coding MGP_NODShiLtJ_T0044021.1 MGP_NODShiLtJ_G0022622.1 mouse_genomes_project 16 36775459 36834150 + MGP_NODShiLtJ_P0044021 Golgb1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044022.1 MGP_NODShiLtJ_G0022622.1 mouse_genomes_project 16 36775476 36789640 + MGP_NODShiLtJ_P0044022 Golgb1 protein_coding protein_coding MGP_NODShiLtJ_T0044023.1 MGP_NODShiLtJ_G0022622.1 mouse_genomes_project 16 36825519 36829434 + Golgb1 protein_coding retained_intron MGP_NODShiLtJ_T0044024.1 MGP_NODShiLtJ_G0022622.1 mouse_genomes_project 16 36832462 36833136 + Golgb1 protein_coding retained_intron MGP_NODShiLtJ_T0043159.1 MGP_NODShiLtJ_G0022414.1 mouse_genomes_project 16 15319885 15330012 + MGP_NODShiLtJ_P0043159 P2rx6 protein_coding protein_coding MGP_NODShiLtJ_T0043160.1 MGP_NODShiLtJ_G0022414.1 mouse_genomes_project 16 15319885 15329101 + MGP_NODShiLtJ_P0043160 P2rx6 protein_coding protein_coding MGP_NODShiLtJ_T0043161.1 MGP_NODShiLtJ_G0022414.1 mouse_genomes_project 16 15319933 15335801 + MGP_NODShiLtJ_P0043161 P2rx6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006782.1 MGP_NODShiLtJ_G0005585.1 mouse_genomes_project 16 29225682 29238501 + 4632428C04Rik lincRNA lincRNA MGP_NODShiLtJ_T0098932.1 MGP_NODShiLtJ_G0037326.1 mouse_genomes_project 16 5591511 5591619 - Gm25805 snRNA snRNA MGP_NODShiLtJ_T0044882.1 MGP_NODShiLtJ_G0022882.1 mouse_genomes_project 16 104998523 105004316 + MGP_NODShiLtJ_P0044882 Kcne2 protein_coding protein_coding MGP_NODShiLtJ_T0044883.1 MGP_NODShiLtJ_G0022882.1 mouse_genomes_project 16 105001802 105004316 + MGP_NODShiLtJ_P0044883 Kcne2 protein_coding protein_coding MGP_NODShiLtJ_T0043639.1 MGP_NODShiLtJ_G0022529.1 mouse_genomes_project 16 26297681 26369247 + MGP_NODShiLtJ_P0043639 Ccdc50 protein_coding protein_coding MGP_NODShiLtJ_T0043640.1 MGP_NODShiLtJ_G0022529.1 mouse_genomes_project 16 26297792 26363434 + MGP_NODShiLtJ_P0043640 Ccdc50 protein_coding protein_coding MGP_NODShiLtJ_T0043641.1 MGP_NODShiLtJ_G0022529.1 mouse_genomes_project 16 26297792 26356722 + MGP_NODShiLtJ_P0043641 Ccdc50 protein_coding protein_coding MGP_NODShiLtJ_T0043642.1 MGP_NODShiLtJ_G0022529.1 mouse_genomes_project 16 26298748 26355402 + MGP_NODShiLtJ_P0043642 Ccdc50 protein_coding protein_coding MGP_NODShiLtJ_T0043643.1 MGP_NODShiLtJ_G0022529.1 mouse_genomes_project 16 26298780 26299904 + Ccdc50 protein_coding processed_transcript MGP_NODShiLtJ_T0013049.1 MGP_NODShiLtJ_G0011157.1 mouse_genomes_project 16 45917986 45918278 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043200.1 MGP_NODShiLtJ_G0022418.1 mouse_genomes_project 16 15414746 15491386 - MGP_NODShiLtJ_P0043200 Med15 protein_coding protein_coding MGP_NODShiLtJ_T0043201.1 MGP_NODShiLtJ_G0022418.1 mouse_genomes_project 16 15414746 15491386 - MGP_NODShiLtJ_P0043201 Med15 protein_coding protein_coding MGP_NODShiLtJ_T0042962.1 MGP_NODShiLtJ_G0022373.1 mouse_genomes_project 16 11529339 11559149 + MGP_NODShiLtJ_P0042962 Nde1 protein_coding protein_coding MGP_NODShiLtJ_T0042963.1 MGP_NODShiLtJ_G0022373.1 mouse_genomes_project 16 11529351 11559049 + MGP_NODShiLtJ_P0042963 Nde1 protein_coding protein_coding MGP_NODShiLtJ_T0042964.1 MGP_NODShiLtJ_G0022373.1 mouse_genomes_project 16 11529362 11559139 + MGP_NODShiLtJ_P0042964 Nde1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042965.1 MGP_NODShiLtJ_G0022373.1 mouse_genomes_project 16 11529368 11536894 + Nde1 protein_coding retained_intron MGP_NODShiLtJ_T0042966.1 MGP_NODShiLtJ_G0022373.1 mouse_genomes_project 16 11529409 11559139 + MGP_NODShiLtJ_P0042966 Nde1 protein_coding protein_coding MGP_NODShiLtJ_T0042967.1 MGP_NODShiLtJ_G0022373.1 mouse_genomes_project 16 11529413 11556661 + Nde1 protein_coding processed_transcript MGP_NODShiLtJ_T0042968.1 MGP_NODShiLtJ_G0022373.1 mouse_genomes_project 16 11541364 11554618 + Nde1 protein_coding retained_intron MGP_NODShiLtJ_T0042969.1 MGP_NODShiLtJ_G0022373.1 mouse_genomes_project 16 11549793 11556741 + MGP_NODShiLtJ_P0042969 Nde1 protein_coding protein_coding MGP_NODShiLtJ_T0043819.1 MGP_NODShiLtJ_G0022573.1 mouse_genomes_project 16 32183450 32199148 + MGP_NODShiLtJ_P0043819 protein_coding protein_coding MGP_NODShiLtJ_T0043820.1 MGP_NODShiLtJ_G0022573.1 mouse_genomes_project 16 32183450 32233137 + MGP_NODShiLtJ_P0043820 protein_coding protein_coding MGP_NODShiLtJ_T0043821.1 MGP_NODShiLtJ_G0022573.1 mouse_genomes_project 16 32183761 32232978 + protein_coding processed_transcript MGP_NODShiLtJ_T0043822.1 MGP_NODShiLtJ_G0022573.1 mouse_genomes_project 16 32206077 32233137 + MGP_NODShiLtJ_P0043822 protein_coding protein_coding MGP_NODShiLtJ_T0043823.1 MGP_NODShiLtJ_G0022573.1 mouse_genomes_project 16 32226006 32233130 + protein_coding processed_transcript MGP_NODShiLtJ_T0043824.1 MGP_NODShiLtJ_G0022573.1 mouse_genomes_project 16 32226085 32226684 + protein_coding processed_transcript MGP_NODShiLtJ_T0043826.1 MGP_NODShiLtJ_G0022573.1 mouse_genomes_project 16 32227270 32228667 + protein_coding retained_intron MGP_NODShiLtJ_T0043827.1 MGP_NODShiLtJ_G0022573.1 mouse_genomes_project 16 32228356 32228870 + protein_coding retained_intron MGP_NODShiLtJ_T0013002.1 MGP_NODShiLtJ_G0011110.1 mouse_genomes_project 16 8091198 8091701 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043561.1 MGP_NODShiLtJ_G0022505.1 mouse_genomes_project 16 21334018 21344407 + MGP_NODShiLtJ_P0043561 Hrg protein_coding protein_coding MGP_NODShiLtJ_T0013048.1 MGP_NODShiLtJ_G0011156.1 mouse_genomes_project 16 44210834 44212777 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042662.1 MGP_NODShiLtJ_G0022296.1 mouse_genomes_project 16 1107268 1130348 + MGP_NODShiLtJ_P0042662 Glis2 protein_coding protein_coding MGP_NODShiLtJ_T0042663.1 MGP_NODShiLtJ_G0022296.1 mouse_genomes_project 16 1113720 1124842 + MGP_NODShiLtJ_P0042663 Glis2 protein_coding protein_coding MGP_NODShiLtJ_T0042664.1 MGP_NODShiLtJ_G0022296.1 mouse_genomes_project 16 1121955 1130333 + Glis2 protein_coding retained_intron MGP_NODShiLtJ_T0042665.1 MGP_NODShiLtJ_G0022296.1 mouse_genomes_project 16 1125800 1128047 + Glis2 protein_coding retained_intron MGP_NODShiLtJ_T0042666.1 MGP_NODShiLtJ_G0022296.1 mouse_genomes_project 16 1126018 1139792 + Glis2 protein_coding processed_transcript MGP_NODShiLtJ_T0003611.1 MGP_NODShiLtJ_G0003266.1 mouse_genomes_project 16 32264918 32268615 + Gm26769 antisense antisense MGP_NODShiLtJ_T0000942.1 MGP_NODShiLtJ_G0000870.1 mouse_genomes_project 16 86567692 86570798 + TEC TEC MGP_NODShiLtJ_T0000943.1 MGP_NODShiLtJ_G0000870.1 mouse_genomes_project 16 86568509 86568871 + TEC pseudogene MGP_NODShiLtJ_T0100213.1 MGP_NODShiLtJ_G0038607.1 mouse_genomes_project 16 38330821 38330950 - Gm27931 snoRNA snoRNA MGP_NODShiLtJ_T0044325.1 MGP_NODShiLtJ_G0022699.1 mouse_genomes_project 16 50737791 50776935 + MGP_NODShiLtJ_P0044325 C330027C09Rik protein_coding protein_coding MGP_NODShiLtJ_T0044326.1 MGP_NODShiLtJ_G0022699.1 mouse_genomes_project 16 50737794 50776935 + MGP_NODShiLtJ_P0044326 C330027C09Rik protein_coding protein_coding MGP_NODShiLtJ_T0044327.1 MGP_NODShiLtJ_G0022699.1 mouse_genomes_project 16 50737829 50744686 + MGP_NODShiLtJ_P0044327 C330027C09Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044328.1 MGP_NODShiLtJ_G0022699.1 mouse_genomes_project 16 50744464 50746672 + C330027C09Rik protein_coding retained_intron MGP_NODShiLtJ_T0044329.1 MGP_NODShiLtJ_G0022699.1 mouse_genomes_project 16 50753026 50776881 + C330027C09Rik protein_coding retained_intron MGP_NODShiLtJ_T0044330.1 MGP_NODShiLtJ_G0022699.1 mouse_genomes_project 16 50755416 50758896 + C330027C09Rik protein_coding retained_intron MGP_NODShiLtJ_T0044331.1 MGP_NODShiLtJ_G0022699.1 mouse_genomes_project 16 50758900 50759955 + C330027C09Rik protein_coding retained_intron MGP_NODShiLtJ_T0044005.1 MGP_NODShiLtJ_G0022620.1 mouse_genomes_project 16 36652166 36775278 - Eaf2 protein_coding processed_transcript MGP_NODShiLtJ_T0044006.1 MGP_NODShiLtJ_G0022620.1 mouse_genomes_project 16 36652167 36775278 - Eaf2 protein_coding processed_transcript MGP_NODShiLtJ_T0044007.1 MGP_NODShiLtJ_G0022620.1 mouse_genomes_project 16 36652168 36669422 - MGP_NODShiLtJ_P0044007 Eaf2 protein_coding protein_coding MGP_NODShiLtJ_T0044008.1 MGP_NODShiLtJ_G0022620.1 mouse_genomes_project 16 36652247 36690641 - Eaf2 protein_coding processed_transcript MGP_NODShiLtJ_T0044009.1 MGP_NODShiLtJ_G0022620.1 mouse_genomes_project 16 36652302 36690586 - MGP_NODShiLtJ_P0044009 Eaf2 protein_coding protein_coding MGP_NODShiLtJ_T0044010.1 MGP_NODShiLtJ_G0022620.1 mouse_genomes_project 16 36684129 36775089 - Eaf2 protein_coding retained_intron MGP_NODShiLtJ_T0043556.1 MGP_NODShiLtJ_G0022503.1 mouse_genomes_project 16 21275992 21284601 + MGP_NODShiLtJ_P0043556 Ahsg protein_coding protein_coding MGP_NODShiLtJ_T0044625.1 MGP_NODShiLtJ_G0022800.1 mouse_genomes_project 16 96545310 96787683 - MGP_NODShiLtJ_P0044625 App protein_coding protein_coding MGP_NODShiLtJ_T0044485.1 MGP_NODShiLtJ_G0022748.1 mouse_genomes_project 16 62798115 62799011 + MGP_NODShiLtJ_P0044485 Olfr195 protein_coding protein_coding MGP_NODShiLtJ_T0042853.1 MGP_NODShiLtJ_G0022350.1 mouse_genomes_project 16 8120215 8128950 + MGP_NODShiLtJ_P0042853 Snn protein_coding protein_coding MGP_NODShiLtJ_T0044692.1 MGP_NODShiLtJ_G0022832.1 mouse_genomes_project 16 101184406 101184867 - MGP_NODShiLtJ_P0044692 Krtap19-9b protein_coding protein_coding MGP_NODShiLtJ_T0043375.1 MGP_NODShiLtJ_G0022467.1 mouse_genomes_project 16 18206123 18311756 + MGP_NODShiLtJ_P0043375 Yeats2 protein_coding protein_coding MGP_NODShiLtJ_T0043376.1 MGP_NODShiLtJ_G0022467.1 mouse_genomes_project 16 18206123 18311756 + MGP_NODShiLtJ_P0043376 Yeats2 protein_coding protein_coding MGP_NODShiLtJ_T0043635.1 MGP_NODShiLtJ_G0022526.1 mouse_genomes_project 16 25763543 25804081 - MGP_NODShiLtJ_P0043635 Gmnc protein_coding protein_coding MGP_NODShiLtJ_T0043636.1 MGP_NODShiLtJ_G0022526.1 mouse_genomes_project 16 25766554 25774194 - MGP_NODShiLtJ_P0043636 Gmnc protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010011.1 MGP_NODShiLtJ_G0008144.1 mouse_genomes_project 16 1781818 1781904 - Mir6364 miRNA miRNA MGP_NODShiLtJ_T0044172.1 MGP_NODShiLtJ_G0022659.1 mouse_genomes_project 16 44917784 44932471 - MGP_NODShiLtJ_P0044172 Zdhhc23 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044173.1 MGP_NODShiLtJ_G0022659.1 mouse_genomes_project 16 44921818 44931848 - MGP_NODShiLtJ_P0044173 Zdhhc23 protein_coding protein_coding MGP_NODShiLtJ_T0042716.1 MGP_NODShiLtJ_G0022307.1 mouse_genomes_project 16 1478978 1480888 + MGP_NODShiLtJ_P0042716 Nudt16l1 protein_coding protein_coding MGP_NODShiLtJ_T0043070.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14787124 14815480 - MGP_NODShiLtJ_P0043070 Ppil2 protein_coding protein_coding MGP_NODShiLtJ_T0043071.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14787124 14815485 - MGP_NODShiLtJ_P0043071 Ppil2 protein_coding protein_coding MGP_NODShiLtJ_T0043072.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14787885 14815470 - MGP_NODShiLtJ_P0043072 Ppil2 protein_coding protein_coding MGP_NODShiLtJ_T0043073.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14789175 14790029 - Ppil2 protein_coding retained_intron MGP_NODShiLtJ_T0043074.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14790671 14792087 - Ppil2 protein_coding retained_intron MGP_NODShiLtJ_T0043075.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14793416 14805359 - Ppil2 protein_coding retained_intron MGP_NODShiLtJ_T0043076.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14796652 14798876 - Ppil2 protein_coding retained_intron MGP_NODShiLtJ_T0043077.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14797492 14815443 - MGP_NODShiLtJ_P0043077 Ppil2 protein_coding protein_coding MGP_NODShiLtJ_T0043078.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14798435 14815464 - Ppil2 protein_coding processed_transcript MGP_NODShiLtJ_T0043079.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14798740 14815441 - Ppil2 protein_coding retained_intron MGP_NODShiLtJ_T0043080.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14811464 14815464 - Ppil2 protein_coding processed_transcript MGP_NODShiLtJ_T0043081.1 MGP_NODShiLtJ_G0022397.1 mouse_genomes_project 16 14813084 14815460 - Ppil2 protein_coding retained_intron MGP_NODShiLtJ_T0043803.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32065550 32093975 + Tnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0043804.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32065967 32089576 + Tnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0043805.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32066319 32110204 + MGP_NODShiLtJ_P0043805 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0043806.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32066319 32110204 + MGP_NODShiLtJ_P0043806 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0043807.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32066349 32110204 + MGP_NODShiLtJ_P0043807 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0043808.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32066502 32110203 + MGP_NODShiLtJ_P0043808 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0043809.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32066635 32093988 + Tnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0043810.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32082710 32093967 + Tnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0043811.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32084610 32093959 + Tnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0043812.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32093935 32097358 + Tnk2 protein_coding processed_transcript MGP_NODShiLtJ_T0043813.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32098877 32106179 + MGP_NODShiLtJ_P0043813 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0043814.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32098879 32110204 + MGP_NODShiLtJ_P0043814 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0043815.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32098901 32106393 + MGP_NODShiLtJ_P0043815 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0043816.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32098915 32106846 + MGP_NODShiLtJ_P0043816 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0043817.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32098918 32105774 + Tnk2 protein_coding retained_intron MGP_NODShiLtJ_T0043818.1 MGP_NODShiLtJ_G0022572.1 mouse_genomes_project 16 32098922 32106595 + MGP_NODShiLtJ_P0043818 Tnk2 protein_coding protein_coding MGP_NODShiLtJ_T0045034.1 MGP_NODShiLtJ_G0022910.1 mouse_genomes_project 16 109168497 109177882 + Wrb protein_coding retained_intron MGP_NODShiLtJ_T0045035.1 MGP_NODShiLtJ_G0022910.1 mouse_genomes_project 16 109168497 109169847 + Wrb protein_coding processed_transcript MGP_NODShiLtJ_T0045036.1 MGP_NODShiLtJ_G0022910.1 mouse_genomes_project 16 109168497 109180955 + MGP_NODShiLtJ_P0045036 Wrb protein_coding protein_coding MGP_NODShiLtJ_T0045037.1 MGP_NODShiLtJ_G0022910.1 mouse_genomes_project 16 109168501 109174929 + MGP_NODShiLtJ_P0045037 Wrb protein_coding protein_coding MGP_NODShiLtJ_T0044878.1 MGP_NODShiLtJ_G0022880.1 mouse_genomes_project 16 104749904 104807092 + MGP_NODShiLtJ_P0044878 Mrps6 protein_coding protein_coding MGP_NODShiLtJ_T0044881.1 MGP_NODShiLtJ_G0022880.1 mouse_genomes_project 16 104801129 104807092 + Mrps6 protein_coding processed_transcript MGP_NODShiLtJ_T0017364.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86338194 86853463 + processed_transcript lincRNA MGP_NODShiLtJ_T0017365.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86338194 86498739 + processed_transcript lincRNA MGP_NODShiLtJ_T0017366.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86338196 86839227 + processed_transcript lincRNA MGP_NODShiLtJ_T0017367.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86446531 86943533 + processed_transcript lincRNA MGP_NODShiLtJ_T0017368.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86446539 86494361 + processed_transcript lincRNA MGP_NODShiLtJ_T0017369.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86446556 86837197 + processed_transcript lincRNA MGP_NODShiLtJ_T0017370.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86446610 86853463 + processed_transcript lincRNA MGP_NODShiLtJ_T0017371.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86446679 86765007 + processed_transcript lincRNA MGP_NODShiLtJ_T0017372.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86446855 86957516 + processed_transcript lincRNA MGP_NODShiLtJ_T0017373.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86630823 86635779 + processed_transcript TEC MGP_NODShiLtJ_T0017374.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86699340 86853463 + processed_transcript lincRNA MGP_NODShiLtJ_T0017375.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86699504 86957520 + processed_transcript lincRNA MGP_NODShiLtJ_T0017376.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86836100 86838347 + processed_transcript TEC MGP_NODShiLtJ_T0017377.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86836638 86837240 + processed_transcript lincRNA MGP_NODShiLtJ_T0017378.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86933700 86957514 + processed_transcript lincRNA MGP_NODShiLtJ_T0017379.1 MGP_NODShiLtJ_G0015193.1 mouse_genomes_project 16 86943244 86957514 + processed_transcript lincRNA MGP_NODShiLtJ_T0006777.1 MGP_NODShiLtJ_G0005580.1 mouse_genomes_project 16 20188358 20189214 - 2610020F03Rik lincRNA lincRNA MGP_NODShiLtJ_T0044714.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102247668 102446910 - MGP_NODShiLtJ_P0044714 Tiam1 protein_coding protein_coding MGP_NODShiLtJ_T0044715.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102247668 102432842 - MGP_NODShiLtJ_P0044715 Tiam1 protein_coding protein_coding MGP_NODShiLtJ_T0044716.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102247668 102446910 - MGP_NODShiLtJ_P0044716 Tiam1 protein_coding protein_coding MGP_NODShiLtJ_T0044717.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102247668 102319533 - MGP_NODShiLtJ_P0044717 Tiam1 protein_coding protein_coding MGP_NODShiLtJ_T0044718.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102247673 102259771 - MGP_NODShiLtJ_P0044718 Tiam1 protein_coding protein_coding MGP_NODShiLtJ_T0044719.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102249459 102280082 - MGP_NODShiLtJ_P0044719 Tiam1 protein_coding protein_coding MGP_NODShiLtJ_T0044720.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102249587 102299594 - Tiam1 protein_coding retained_intron MGP_NODShiLtJ_T0044721.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102250151 102257012 - Tiam1 protein_coding processed_transcript MGP_NODShiLtJ_T0044722.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102253414 102261720 - MGP_NODShiLtJ_P0044722 Tiam1 protein_coding protein_coding MGP_NODShiLtJ_T0044723.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102358886 102446910 - Tiam1 protein_coding processed_transcript MGP_NODShiLtJ_T0044724.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102358927 102432752 - Tiam1 protein_coding processed_transcript MGP_NODShiLtJ_T0044725.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102358997 102380401 - Tiam1 protein_coding processed_transcript MGP_NODShiLtJ_T0044726.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102368554 102420307 - Tiam1 protein_coding retained_intron MGP_NODShiLtJ_T0044727.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102368885 102446110 - Tiam1 protein_coding processed_transcript MGP_NODShiLtJ_T0044728.1 MGP_NODShiLtJ_G0022852.1 mouse_genomes_project 16 102420164 102454183 - Tiam1 protein_coding processed_transcript MGP_NODShiLtJ_T0044374.1 MGP_NODShiLtJ_G0022713.1 mouse_genomes_project 16 59236480 59250728 - MGP_NODShiLtJ_P0044374 Pcnp protein_coding protein_coding MGP_NODShiLtJ_T0044375.1 MGP_NODShiLtJ_G0022713.1 mouse_genomes_project 16 59236490 59250758 - MGP_NODShiLtJ_P0044375 Pcnp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044376.1 MGP_NODShiLtJ_G0022713.1 mouse_genomes_project 16 59237781 59250748 - Pcnp protein_coding processed_transcript MGP_NODShiLtJ_T0044377.1 MGP_NODShiLtJ_G0022713.1 mouse_genomes_project 16 59237980 59250738 - MGP_NODShiLtJ_P0044377 Pcnp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044378.1 MGP_NODShiLtJ_G0022713.1 mouse_genomes_project 16 59238013 59250768 - Pcnp protein_coding processed_transcript MGP_NODShiLtJ_T0044379.1 MGP_NODShiLtJ_G0022713.1 mouse_genomes_project 16 59238244 59245730 - MGP_NODShiLtJ_P0044379 Pcnp protein_coding protein_coding MGP_NODShiLtJ_T0044380.1 MGP_NODShiLtJ_G0022713.1 mouse_genomes_project 16 59239173 59250758 - MGP_NODShiLtJ_P0044380 Pcnp protein_coding protein_coding MGP_NODShiLtJ_T0043947.1 MGP_NODShiLtJ_G0022602.1 mouse_genomes_project 16 35709499 35722683 - MGP_NODShiLtJ_P0043947 Dtx3l protein_coding protein_coding MGP_NODShiLtJ_T0043948.1 MGP_NODShiLtJ_G0022602.1 mouse_genomes_project 16 35715407 35722683 - MGP_NODShiLtJ_P0043948 Dtx3l protein_coding protein_coding MGP_NODShiLtJ_T0044280.1 MGP_NODShiLtJ_G0022684.1 mouse_genomes_project 16 46843820 46857179 - MGP_NODShiLtJ_P0044280 Tagln3 protein_coding protein_coding MGP_NODShiLtJ_T0044780.1 MGP_NODShiLtJ_G0022865.1 mouse_genomes_project 16 103843311 103846439 + MGP_NODShiLtJ_P0044780 Olig2 protein_coding protein_coding MGP_NODShiLtJ_T0042720.1 MGP_NODShiLtJ_G0022311.1 mouse_genomes_project 16 1552489 1553508 + MGP_NODShiLtJ_P0042720 Smim22 protein_coding protein_coding MGP_NODShiLtJ_T0042721.1 MGP_NODShiLtJ_G0022311.1 mouse_genomes_project 16 1552517 1553244 + Smim22 protein_coding retained_intron MGP_NODShiLtJ_T0042722.1 MGP_NODShiLtJ_G0022311.1 mouse_genomes_project 16 1552538 1553511 + MGP_NODShiLtJ_P0042722 Smim22 protein_coding protein_coding MGP_NODShiLtJ_T0042723.1 MGP_NODShiLtJ_G0022311.1 mouse_genomes_project 16 1552553 1553511 + Smim22 protein_coding processed_transcript MGP_NODShiLtJ_T0042724.1 MGP_NODShiLtJ_G0022311.1 mouse_genomes_project 16 1552553 1553511 + MGP_NODShiLtJ_P0042724 Smim22 protein_coding protein_coding MGP_NODShiLtJ_T0042725.1 MGP_NODShiLtJ_G0022311.1 mouse_genomes_project 16 1552553 1553508 + MGP_NODShiLtJ_P0042725 Smim22 protein_coding protein_coding MGP_NODShiLtJ_T0042726.1 MGP_NODShiLtJ_G0022311.1 mouse_genomes_project 16 1552560 1553511 + Smim22 protein_coding processed_transcript MGP_NODShiLtJ_T0042727.1 MGP_NODShiLtJ_G0022311.1 mouse_genomes_project 16 1552969 1553511 + Smim22 protein_coding retained_intron MGP_NODShiLtJ_T0006794.1 MGP_NODShiLtJ_G0005596.1 mouse_genomes_project 16 51647004 51653814 + Gm16619 lincRNA lincRNA MGP_NODShiLtJ_T0098952.1 MGP_NODShiLtJ_G0037346.1 mouse_genomes_project 16 35979243 35979350 - Gm22349 snRNA snRNA MGP_NODShiLtJ_T0044428.1 MGP_NODShiLtJ_G0022728.1 mouse_genomes_project 16 61030854 61189614 - MGP_NODShiLtJ_P0044428 Col8a1 protein_coding protein_coding MGP_NODShiLtJ_T0013053.1 MGP_NODShiLtJ_G0011161.1 mouse_genomes_project 16 48349709 48351550 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101075.1 MGP_NODShiLtJ_G0039433.1 mouse_genomes_project 16 85839276 85889120 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101076.1 MGP_NODShiLtJ_G0039433.1 mouse_genomes_project 16 85841064 85841433 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0012999.1 MGP_NODShiLtJ_G0011107.1 mouse_genomes_project 16 6963774 6964540 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010053.1 MGP_NODShiLtJ_G0008186.1 mouse_genomes_project 16 58654861 58654928 + Mir5118 miRNA miRNA MGP_NODShiLtJ_T0042925.1 MGP_NODShiLtJ_G0022365.1 mouse_genomes_project 16 11007694 11029507 - MGP_NODShiLtJ_P0042925 Pla2g10 protein_coding protein_coding MGP_NODShiLtJ_T0042926.1 MGP_NODShiLtJ_G0022365.1 mouse_genomes_project 16 11007696 11030047 - MGP_NODShiLtJ_P0042926 Pla2g10 protein_coding protein_coding MGP_NODShiLtJ_T0042927.1 MGP_NODShiLtJ_G0022365.1 mouse_genomes_project 16 11008031 11029783 - Pla2g10 protein_coding processed_transcript MGP_NODShiLtJ_T0042928.1 MGP_NODShiLtJ_G0022365.1 mouse_genomes_project 16 11022128 11029743 - Pla2g10 protein_coding processed_transcript MGP_NODShiLtJ_T0044156.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44809929 44839361 - MGP_NODShiLtJ_P0044156 Qtrtd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044157.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44809932 44839380 - Qtrtd1 protein_coding retained_intron MGP_NODShiLtJ_T0044158.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44809932 44839417 - MGP_NODShiLtJ_P0044158 Qtrtd1 protein_coding protein_coding MGP_NODShiLtJ_T0044159.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44811309 44816138 - Qtrtd1 protein_coding retained_intron MGP_NODShiLtJ_T0044160.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44811555 44879132 - Qtrtd1 protein_coding retained_intron MGP_NODShiLtJ_T0044161.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44816089 44817978 - Qtrtd1 protein_coding retained_intron MGP_NODShiLtJ_T0044162.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44817528 44839388 - Qtrtd1 protein_coding retained_intron MGP_NODShiLtJ_T0044163.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44820233 44826684 - Qtrtd1 protein_coding retained_intron MGP_NODShiLtJ_T0044164.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44826502 44839387 - MGP_NODShiLtJ_P0044164 Qtrtd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044165.1 MGP_NODShiLtJ_G0022657.1 mouse_genomes_project 16 44830022 44839388 - Qtrtd1 protein_coding retained_intron MGP_NODShiLtJ_T0044382.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315066 59317862 + Senp7 protein_coding processed_transcript MGP_NODShiLtJ_T0044383.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315071 59449306 + MGP_NODShiLtJ_P0044383 Senp7 protein_coding protein_coding MGP_NODShiLtJ_T0044384.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315071 59372074 + MGP_NODShiLtJ_P0044384 Senp7 protein_coding protein_coding MGP_NODShiLtJ_T0044385.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315126 59372069 + Senp7 protein_coding processed_transcript MGP_NODShiLtJ_T0044386.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315130 59449307 + MGP_NODShiLtJ_P0044386 Senp7 protein_coding protein_coding MGP_NODShiLtJ_T0044387.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315137 59345038 + Senp7 protein_coding retained_intron MGP_NODShiLtJ_T0044388.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315137 59385536 + MGP_NODShiLtJ_P0044388 Senp7 protein_coding protein_coding MGP_NODShiLtJ_T0044389.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315142 59371950 + Senp7 protein_coding processed_transcript MGP_NODShiLtJ_T0044390.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59315142 59388458 + MGP_NODShiLtJ_P0044390 Senp7 protein_coding protein_coding MGP_NODShiLtJ_T0044391.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59439222 59448025 + Senp7 protein_coding retained_intron MGP_NODShiLtJ_T0044392.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59439696 59447634 + Senp7 protein_coding retained_intron MGP_NODShiLtJ_T0044393.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59441681 59449279 + Senp7 protein_coding processed_transcript MGP_NODShiLtJ_T0044394.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59442858 59447539 + Senp7 protein_coding processed_transcript MGP_NODShiLtJ_T0044395.1 MGP_NODShiLtJ_G0022715.1 mouse_genomes_project 16 59445423 59448014 + Senp7 protein_coding processed_transcript MGP_NODShiLtJ_T0017382.1 MGP_NODShiLtJ_G0015195.1 mouse_genomes_project 16 103594583 103599829 + 4930404I05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017383.1 MGP_NODShiLtJ_G0015195.1 mouse_genomes_project 16 103597052 103600069 + 4930404I05Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0043131.1 MGP_NODShiLtJ_G0022410.1 mouse_genomes_project 16 15242734 15263430 + MGP_NODShiLtJ_P0043131 Aifm3 protein_coding protein_coding MGP_NODShiLtJ_T0043132.1 MGP_NODShiLtJ_G0022410.1 mouse_genomes_project 16 15242786 15263430 + MGP_NODShiLtJ_P0043132 Aifm3 protein_coding protein_coding MGP_NODShiLtJ_T0043133.1 MGP_NODShiLtJ_G0022410.1 mouse_genomes_project 16 15242970 15261351 + Aifm3 protein_coding retained_intron MGP_NODShiLtJ_T0043134.1 MGP_NODShiLtJ_G0022410.1 mouse_genomes_project 16 15254086 15263426 + Aifm3 protein_coding retained_intron MGP_NODShiLtJ_T0043135.1 MGP_NODShiLtJ_G0022410.1 mouse_genomes_project 16 15258186 15259647 + Aifm3 protein_coding retained_intron MGP_NODShiLtJ_T0043136.1 MGP_NODShiLtJ_G0022410.1 mouse_genomes_project 16 15258836 15261869 + Aifm3 protein_coding retained_intron MGP_NODShiLtJ_T0043644.1 MGP_NODShiLtJ_G0022530.1 mouse_genomes_project 16 27265122 27566065 - MGP_NODShiLtJ_P0043644 Fgf12 protein_coding protein_coding MGP_NODShiLtJ_T0044254.1 MGP_NODShiLtJ_G0022677.1 mouse_genomes_project 16 46307742 46336369 + MGP_NODShiLtJ_P0044254 Btla protein_coding protein_coding MGP_NODShiLtJ_T0044255.1 MGP_NODShiLtJ_G0022677.1 mouse_genomes_project 16 46307764 46336372 + MGP_NODShiLtJ_P0044255 Btla protein_coding protein_coding MGP_NODShiLtJ_T0043922.1 MGP_NODShiLtJ_G0022592.1 mouse_genomes_project 16 34381510 34418167 + MGP_NODShiLtJ_P0043922 Ccdc14 protein_coding protein_coding MGP_NODShiLtJ_T0098285.1 MGP_NODShiLtJ_G0036692.1 mouse_genomes_project 16 11690393 11691605 - Gm15869 sense_intronic sense_intronic MGP_NODShiLtJ_T0013013.1 MGP_NODShiLtJ_G0011121.1 mouse_genomes_project 16 13962579 13963553 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044299.1 MGP_NODShiLtJ_G0022688.1 mouse_genomes_project 16 47187823 47276072 - MGP_NODShiLtJ_P0044299 Cd96 protein_coding protein_coding MGP_NODShiLtJ_T0017380.1 MGP_NODShiLtJ_G0015194.1 mouse_genomes_project 16 99537776 99550179 + processed_transcript retained_intron MGP_NODShiLtJ_T0017381.1 MGP_NODShiLtJ_G0015194.1 mouse_genomes_project 16 99537850 99550382 + processed_transcript processed_transcript MGP_NODShiLtJ_T0042597.1 MGP_NODShiLtJ_G0022284.1 mouse_genomes_project 16 310045 341770 + MGP_NODShiLtJ_P0042597 Naa60 protein_coding protein_coding MGP_NODShiLtJ_T0042599.1 MGP_NODShiLtJ_G0022284.1 mouse_genomes_project 16 324916 345732 + MGP_NODShiLtJ_P0042599 Naa60 protein_coding protein_coding MGP_NODShiLtJ_T0042600.1 MGP_NODShiLtJ_G0022284.1 mouse_genomes_project 16 324924 338307 + MGP_NODShiLtJ_P0042600 Naa60 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042601.1 MGP_NODShiLtJ_G0022284.1 mouse_genomes_project 16 324939 344708 + MGP_NODShiLtJ_P0042601 Naa60 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042602.1 MGP_NODShiLtJ_G0022284.1 mouse_genomes_project 16 324942 338338 + MGP_NODShiLtJ_P0042602 Naa60 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042603.1 MGP_NODShiLtJ_G0022284.1 mouse_genomes_project 16 324969 341359 + Naa60 protein_coding retained_intron MGP_NODShiLtJ_T0042604.1 MGP_NODShiLtJ_G0022284.1 mouse_genomes_project 16 335333 342898 + MGP_NODShiLtJ_P0042604 Naa60 protein_coding protein_coding MGP_NODShiLtJ_T0042605.1 MGP_NODShiLtJ_G0022284.1 mouse_genomes_project 16 335333 342773 + MGP_NODShiLtJ_P0042605 Naa60 protein_coding protein_coding MGP_NODShiLtJ_T0043747.1 MGP_NODShiLtJ_G0022555.1 mouse_genomes_project 16 31335147 31368788 - MGP_NODShiLtJ_P0043747 Senp5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043748.1 MGP_NODShiLtJ_G0022555.1 mouse_genomes_project 16 31338998 31366947 - MGP_NODShiLtJ_P0043748 Senp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043749.1 MGP_NODShiLtJ_G0022555.1 mouse_genomes_project 16 31351040 31368123 - MGP_NODShiLtJ_P0043749 Senp5 protein_coding protein_coding MGP_NODShiLtJ_T0043750.1 MGP_NODShiLtJ_G0022555.1 mouse_genomes_project 16 31353169 31383853 - Senp5 protein_coding retained_intron MGP_NODShiLtJ_T0044221.1 MGP_NODShiLtJ_G0022669.1 mouse_genomes_project 16 45759031 45769583 - MGP_NODShiLtJ_P0044221 Gtpbp8 protein_coding protein_coding MGP_NODShiLtJ_T0044222.1 MGP_NODShiLtJ_G0022669.1 mouse_genomes_project 16 45761405 45769579 - MGP_NODShiLtJ_P0044222 Gtpbp8 protein_coding protein_coding MGP_NODShiLtJ_T0044223.1 MGP_NODShiLtJ_G0022669.1 mouse_genomes_project 16 45761528 45769503 - MGP_NODShiLtJ_P0044223 Gtpbp8 protein_coding protein_coding MGP_NODShiLtJ_T0044224.1 MGP_NODShiLtJ_G0022669.1 mouse_genomes_project 16 45767027 45769529 - MGP_NODShiLtJ_P0044224 Gtpbp8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003639.1 MGP_NODShiLtJ_G0003287.1 mouse_genomes_project 16 105016376 105020129 - 1700048M11Rik antisense antisense MGP_NODShiLtJ_T0044495.1 MGP_NODShiLtJ_G0022758.1 mouse_genomes_project 16 63207948 63228799 + MGP_NODShiLtJ_P0044495 Mina protein_coding protein_coding MGP_NODShiLtJ_T0044496.1 MGP_NODShiLtJ_G0022758.1 mouse_genomes_project 16 63207977 63213740 + MGP_NODShiLtJ_P0044496 Mina protein_coding protein_coding MGP_NODShiLtJ_T0044497.1 MGP_NODShiLtJ_G0022758.1 mouse_genomes_project 16 63207995 63228006 + MGP_NODShiLtJ_P0044497 Mina protein_coding protein_coding MGP_NODShiLtJ_T0044498.1 MGP_NODShiLtJ_G0022758.1 mouse_genomes_project 16 63208241 63228629 + MGP_NODShiLtJ_P0044498 Mina protein_coding protein_coding MGP_NODShiLtJ_T0044499.1 MGP_NODShiLtJ_G0022758.1 mouse_genomes_project 16 63208516 63211931 + MGP_NODShiLtJ_P0044499 Mina protein_coding protein_coding MGP_NODShiLtJ_T0044500.1 MGP_NODShiLtJ_G0022758.1 mouse_genomes_project 16 63223750 63226032 + Mina protein_coding retained_intron MGP_NODShiLtJ_T0043673.1 MGP_NODShiLtJ_G0022536.1 mouse_genomes_project 16 29172349 29176164 - MGP_NODShiLtJ_P0043673 Gm1968 protein_coding protein_coding MGP_NODShiLtJ_T0044804.1 MGP_NODShiLtJ_G0022873.1 mouse_genomes_project 16 104262831 104267523 - MGP_NODShiLtJ_P0044804 Dnajc28 protein_coding protein_coding MGP_NODShiLtJ_T0044805.1 MGP_NODShiLtJ_G0022873.1 mouse_genomes_project 16 104264249 104267518 - MGP_NODShiLtJ_P0044805 Dnajc28 protein_coding protein_coding MGP_NODShiLtJ_T0044806.1 MGP_NODShiLtJ_G0022873.1 mouse_genomes_project 16 104265360 104267515 - MGP_NODShiLtJ_P0044806 Dnajc28 protein_coding protein_coding MGP_NODShiLtJ_T0044807.1 MGP_NODShiLtJ_G0022873.1 mouse_genomes_project 16 104265625 104267550 - MGP_NODShiLtJ_P0044807 Dnajc28 protein_coding protein_coding MGP_NODShiLtJ_T0044534.1 MGP_NODShiLtJ_G0022772.1 mouse_genomes_project 16 71034868 71061086 + MGP_NODShiLtJ_P0044534 Pou1f1 protein_coding protein_coding MGP_NODShiLtJ_T0044535.1 MGP_NODShiLtJ_G0022772.1 mouse_genomes_project 16 71034869 71041178 + Pou1f1 protein_coding retained_intron MGP_NODShiLtJ_T0044536.1 MGP_NODShiLtJ_G0022772.1 mouse_genomes_project 16 71034869 71062642 + MGP_NODShiLtJ_P0044536 Pou1f1 protein_coding protein_coding MGP_NODShiLtJ_T0044537.1 MGP_NODShiLtJ_G0022772.1 mouse_genomes_project 16 71034905 71061075 + MGP_NODShiLtJ_P0044537 Pou1f1 protein_coding protein_coding MGP_NODShiLtJ_T0044538.1 MGP_NODShiLtJ_G0022772.1 mouse_genomes_project 16 71038332 71060936 + MGP_NODShiLtJ_P0044538 Pou1f1 protein_coding protein_coding MGP_NODShiLtJ_T0043763.1 MGP_NODShiLtJ_G0022558.1 mouse_genomes_project 16 31486850 31494805 + MGP_NODShiLtJ_P0043763 Cep19 protein_coding protein_coding MGP_NODShiLtJ_T0043764.1 MGP_NODShiLtJ_G0022558.1 mouse_genomes_project 16 31487002 31494787 + MGP_NODShiLtJ_P0043764 Cep19 protein_coding protein_coding MGP_NODShiLtJ_T0043765.1 MGP_NODShiLtJ_G0022558.1 mouse_genomes_project 16 31490613 31494791 + MGP_NODShiLtJ_P0043765 Cep19 protein_coding protein_coding MGP_NODShiLtJ_T0100219.1 MGP_NODShiLtJ_G0038613.1 mouse_genomes_project 16 55927369 55927477 - Gm22459 snoRNA snoRNA MGP_NODShiLtJ_T0044083.1 MGP_NODShiLtJ_G0022639.1 mouse_genomes_project 16 38487873 38505222 + MGP_NODShiLtJ_P0044083 Gm21987 protein_coding protein_coding MGP_NODShiLtJ_T0006823.1 MGP_NODShiLtJ_G0005614.1 mouse_genomes_project 16 108775836 108778120 - 2810404F17Rik lincRNA lincRNA MGP_NODShiLtJ_T0044166.1 MGP_NODShiLtJ_G0022658.1 mouse_genomes_project 16 44839630 44891856 + MGP_NODShiLtJ_P0044166 Ccdc191 protein_coding protein_coding MGP_NODShiLtJ_T0044167.1 MGP_NODShiLtJ_G0022658.1 mouse_genomes_project 16 44839633 44917069 + MGP_NODShiLtJ_P0044167 Ccdc191 protein_coding protein_coding MGP_NODShiLtJ_T0044168.1 MGP_NODShiLtJ_G0022658.1 mouse_genomes_project 16 44839671 44858870 + MGP_NODShiLtJ_P0044168 Ccdc191 protein_coding protein_coding MGP_NODShiLtJ_T0044169.1 MGP_NODShiLtJ_G0022658.1 mouse_genomes_project 16 44839722 44916459 + MGP_NODShiLtJ_P0044169 Ccdc191 protein_coding protein_coding MGP_NODShiLtJ_T0044170.1 MGP_NODShiLtJ_G0022658.1 mouse_genomes_project 16 44891314 44896427 + Ccdc191 protein_coding processed_transcript MGP_NODShiLtJ_T0044171.1 MGP_NODShiLtJ_G0022658.1 mouse_genomes_project 16 44891435 44917069 + MGP_NODShiLtJ_P0044171 Ccdc191 protein_coding protein_coding MGP_NODShiLtJ_T0043253.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16063642 16068466 + Trmt2a protein_coding retained_intron MGP_NODShiLtJ_T0043254.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16063846 16068466 + MGP_NODShiLtJ_P0043254 Trmt2a protein_coding protein_coding MGP_NODShiLtJ_T0043255.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16063846 16069736 + MGP_NODShiLtJ_P0043255 Trmt2a protein_coding protein_coding MGP_NODShiLtJ_T0043256.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16063965 16068466 + Trmt2a protein_coding retained_intron MGP_NODShiLtJ_T0043257.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16063972 16068472 + Trmt2a protein_coding retained_intron MGP_NODShiLtJ_T0043258.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16063972 16068462 + Trmt2a protein_coding retained_intron MGP_NODShiLtJ_T0043259.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16064025 16068466 + MGP_NODShiLtJ_P0043259 Trmt2a protein_coding protein_coding MGP_NODShiLtJ_T0043260.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16064984 16068076 + MGP_NODShiLtJ_P0043260 Trmt2a protein_coding protein_coding MGP_NODShiLtJ_T0043261.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16066385 16068465 + MGP_NODShiLtJ_P0043261 Trmt2a protein_coding protein_coding MGP_NODShiLtJ_T0043262.1 MGP_NODShiLtJ_G0022437.1 mouse_genomes_project 16 16067184 16068195 + Trmt2a protein_coding retained_intron MGP_NODShiLtJ_T0044651.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99523762 99537651 - MGP_NODShiLtJ_P0044651 Cct8 protein_coding protein_coding MGP_NODShiLtJ_T0044652.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99524444 99537566 - MGP_NODShiLtJ_P0044652 Cct8 protein_coding protein_coding MGP_NODShiLtJ_T0044653.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99524444 99537566 - MGP_NODShiLtJ_P0044653 Cct8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044654.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99525355 99530623 - MGP_NODShiLtJ_P0044654 Cct8 protein_coding protein_coding MGP_NODShiLtJ_T0044655.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99527216 99527848 - Cct8 protein_coding retained_intron MGP_NODShiLtJ_T0044656.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99527356 99528133 - Cct8 protein_coding retained_intron MGP_NODShiLtJ_T0044657.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99527504 99528275 - Cct8 protein_coding retained_intron MGP_NODShiLtJ_T0044658.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99530624 99533228 - Cct8 protein_coding processed_transcript MGP_NODShiLtJ_T0044659.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99530710 99537637 - MGP_NODShiLtJ_P0044659 Cct8 protein_coding protein_coding MGP_NODShiLtJ_T0044660.1 MGP_NODShiLtJ_G0022808.1 mouse_genomes_project 16 99532267 99537482 - MGP_NODShiLtJ_P0044660 Cct8 protein_coding protein_coding MGP_NODShiLtJ_T0098951.1 MGP_NODShiLtJ_G0037345.1 mouse_genomes_project 16 35955094 35955197 - Gm23080 snRNA snRNA MGP_NODShiLtJ_T0100193.1 MGP_NODShiLtJ_G0038587.1 mouse_genomes_project 16 5285264 5285346 - Gm23706 snoRNA snoRNA MGP_NODShiLtJ_T0012993.1 MGP_NODShiLtJ_G0011101.1 mouse_genomes_project 16 368209 368522 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006789.1 MGP_NODShiLtJ_G0005592.1 mouse_genomes_project 16 44255594 44273270 - Gm9968 lincRNA lincRNA MGP_NODShiLtJ_T0042785.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5505875 5618492 - MGP_NODShiLtJ_P0042785 Usp7 protein_coding protein_coding MGP_NODShiLtJ_T0042786.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5505880 5558204 - MGP_NODShiLtJ_P0042786 Usp7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042787.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5506426 5558127 - MGP_NODShiLtJ_P0042787 Usp7 protein_coding protein_coding MGP_NODShiLtJ_T0042788.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5507060 5538750 - Usp7 protein_coding processed_transcript MGP_NODShiLtJ_T0042789.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5512457 5515111 - Usp7 protein_coding retained_intron MGP_NODShiLtJ_T0042790.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5512957 5513862 - Usp7 protein_coding retained_intron MGP_NODShiLtJ_T0042791.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5513756 5514813 - Usp7 protein_coding retained_intron MGP_NODShiLtJ_T0042792.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5513931 5523823 - MGP_NODShiLtJ_P0042792 Usp7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042793.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5516437 5520875 - Usp7 protein_coding retained_intron MGP_NODShiLtJ_T0042794.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5520559 5524021 - Usp7 protein_coding retained_intron MGP_NODShiLtJ_T0042795.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5522038 5522403 - Usp7 protein_coding retained_intron MGP_NODShiLtJ_T0042796.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5522047 5523313 - Usp7 protein_coding retained_intron MGP_NODShiLtJ_T0042797.1 MGP_NODShiLtJ_G0022330.1 mouse_genomes_project 16 5523053 5523922 - Usp7 protein_coding retained_intron MGP_NODShiLtJ_T0043966.1 MGP_NODShiLtJ_G0022606.1 mouse_genomes_project 16 35839379 35869765 - MGP_NODShiLtJ_P0043966 Fam162a protein_coding protein_coding MGP_NODShiLtJ_T0100229.1 MGP_NODShiLtJ_G0038623.1 mouse_genomes_project 16 82478985 82479120 - Gm22163 snoRNA snoRNA MGP_NODShiLtJ_T0043949.1 MGP_NODShiLtJ_G0022603.1 mouse_genomes_project 16 35722543 35755135 + MGP_NODShiLtJ_P0043949 Parp9 protein_coding protein_coding MGP_NODShiLtJ_T0043950.1 MGP_NODShiLtJ_G0022603.1 mouse_genomes_project 16 35722561 35727235 + Parp9 protein_coding retained_intron MGP_NODShiLtJ_T0043951.1 MGP_NODShiLtJ_G0022603.1 mouse_genomes_project 16 35722592 35731848 + MGP_NODShiLtJ_P0043951 Parp9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043952.1 MGP_NODShiLtJ_G0022603.1 mouse_genomes_project 16 35722694 35759518 + MGP_NODShiLtJ_P0043952 Parp9 protein_coding protein_coding MGP_NODShiLtJ_T0043953.1 MGP_NODShiLtJ_G0022603.1 mouse_genomes_project 16 35724463 35732083 + Parp9 protein_coding processed_transcript MGP_NODShiLtJ_T0043954.1 MGP_NODShiLtJ_G0022603.1 mouse_genomes_project 16 35732445 35742012 + MGP_NODShiLtJ_P0043954 Parp9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006761.1 MGP_NODShiLtJ_G0005567.1 mouse_genomes_project 16 7864399 7870939 + Gm26822 lincRNA lincRNA MGP_NODShiLtJ_T0043920.1 MGP_NODShiLtJ_G0022591.1 mouse_genomes_project 16 34323565 34367174 + MGP_NODShiLtJ_P0043920 Ropn1 protein_coding protein_coding MGP_NODShiLtJ_T0043921.1 MGP_NODShiLtJ_G0022591.1 mouse_genomes_project 16 34324832 34368591 + MGP_NODShiLtJ_P0043921 Ropn1 protein_coding protein_coding MGP_NODShiLtJ_T0011293.1 MGP_NODShiLtJ_G0009426.1 mouse_genomes_project 16 4983805 4984079 + Gm23476 misc_RNA misc_RNA MGP_NODShiLtJ_T0003595.1 MGP_NODShiLtJ_G0003252.1 mouse_genomes_project 16 8807785 8811474 - Gm4279 antisense antisense MGP_NODShiLtJ_T0013052.1 MGP_NODShiLtJ_G0011160.1 mouse_genomes_project 16 46659303 46660659 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042718.1 MGP_NODShiLtJ_G0022309.1 mouse_genomes_project 16 1511403 1522146 + MGP_NODShiLtJ_P0042718 4930451G09Rik protein_coding protein_coding MGP_NODShiLtJ_T0044942.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107254913 107361710 + MGP_NODShiLtJ_P0044942 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044943.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255034 107332668 + MGP_NODShiLtJ_P0044943 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044944.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255038 107293663 + Ttc3 protein_coding retained_intron MGP_NODShiLtJ_T0044945.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255038 107324088 + MGP_NODShiLtJ_P0044945 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044946.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255041 107332673 + MGP_NODShiLtJ_P0044946 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044947.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255044 107308517 + MGP_NODShiLtJ_P0044947 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044948.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255045 107283823 + MGP_NODShiLtJ_P0044948 Ttc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044949.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255046 107306185 + Ttc3 protein_coding processed_transcript MGP_NODShiLtJ_T0044950.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255046 107312120 + MGP_NODShiLtJ_P0044950 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044951.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255046 107308445 + MGP_NODShiLtJ_P0044951 Ttc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044952.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255052 107332680 + MGP_NODShiLtJ_P0044952 Ttc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044953.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255062 107299545 + Ttc3 protein_coding processed_transcript MGP_NODShiLtJ_T0044954.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255062 107332670 + MGP_NODShiLtJ_P0044954 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044955.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255062 107272335 + MGP_NODShiLtJ_P0044955 Ttc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044956.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255062 107275911 + MGP_NODShiLtJ_P0044956 Ttc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044957.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255075 107305783 + MGP_NODShiLtJ_P0044957 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044958.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255076 107332680 + MGP_NODShiLtJ_P0044958 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044959.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255076 107332680 + MGP_NODShiLtJ_P0044959 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044960.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255091 107317709 + MGP_NODShiLtJ_P0044960 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044961.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255092 107293192 + MGP_NODShiLtJ_P0044961 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044962.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255092 107300690 + MGP_NODShiLtJ_P0044962 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044963.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255093 107301958 + Ttc3 protein_coding processed_transcript MGP_NODShiLtJ_T0044964.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255093 107284067 + MGP_NODShiLtJ_P0044964 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044965.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107255118 107310104 + MGP_NODShiLtJ_P0044965 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044966.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107314970 107322896 + MGP_NODShiLtJ_P0044966 Ttc3 protein_coding protein_coding MGP_NODShiLtJ_T0044967.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107330098 107338861 + Ttc3 protein_coding retained_intron MGP_NODShiLtJ_T0044968.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107342748 107351717 + MGP_NODShiLtJ_P0044968 Ttc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044969.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107349030 107360482 + Ttc3 protein_coding retained_intron MGP_NODShiLtJ_T0044970.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107356792 107361373 + Ttc3 protein_coding retained_intron MGP_NODShiLtJ_T0044971.1 MGP_NODShiLtJ_G0022900.1 mouse_genomes_project 16 107358153 107360705 + Ttc3 protein_coding retained_intron MGP_NODShiLtJ_T0042799.1 MGP_NODShiLtJ_G0022332.1 mouse_genomes_project 16 6472101 6913799 - MGP_NODShiLtJ_P0042799 Grin2a protein_coding protein_coding MGP_NODShiLtJ_T0042800.1 MGP_NODShiLtJ_G0022332.1 mouse_genomes_project 16 6483063 6913458 - MGP_NODShiLtJ_P0042800 Grin2a protein_coding protein_coding MGP_NODShiLtJ_T0042801.1 MGP_NODShiLtJ_G0022332.1 mouse_genomes_project 16 6483149 6911408 - MGP_NODShiLtJ_P0042801 Grin2a protein_coding protein_coding MGP_NODShiLtJ_T0042802.1 MGP_NODShiLtJ_G0022332.1 mouse_genomes_project 16 6678252 6717388 - Grin2a protein_coding processed_transcript MGP_NODShiLtJ_T0042803.1 MGP_NODShiLtJ_G0022332.1 mouse_genomes_project 16 6910529 6914436 - Grin2a protein_coding retained_intron MGP_NODShiLtJ_T0042804.1 MGP_NODShiLtJ_G0022332.1 mouse_genomes_project 16 6910529 6913146 - Grin2a protein_coding retained_intron MGP_NODShiLtJ_T0006778.1 MGP_NODShiLtJ_G0005581.1 mouse_genomes_project 16 22935862 22937842 - Lppos lincRNA lincRNA MGP_NODShiLtJ_T0003632.1 MGP_NODShiLtJ_G0003281.1 mouse_genomes_project 16 51604053 51645342 - Gm15518 antisense antisense MGP_NODShiLtJ_T0043562.1 MGP_NODShiLtJ_G0022506.1 mouse_genomes_project 16 21386600 21451237 - MGP_NODShiLtJ_P0043562 Kng2 protein_coding protein_coding MGP_NODShiLtJ_T0042972.1 MGP_NODShiLtJ_G0022375.1 mouse_genomes_project 16 11672062 11691652 - Fopnl protein_coding processed_transcript MGP_NODShiLtJ_T0042973.1 MGP_NODShiLtJ_G0022375.1 mouse_genomes_project 16 11672750 11691641 - MGP_NODShiLtJ_P0042973 Fopnl protein_coding protein_coding MGP_NODShiLtJ_T0003603.1 MGP_NODShiLtJ_G0003259.1 mouse_genomes_project 16 16442537 16461674 + 4930588K23Rik antisense antisense MGP_NODShiLtJ_T0010038.1 MGP_NODShiLtJ_G0008171.1 mouse_genomes_project 16 30578253 30578348 + Gm27415 miRNA miRNA MGP_NODShiLtJ_T0042591.1 MGP_NODShiLtJ_G0022282.1 mouse_genomes_project 16 283226 294548 + MGP_NODShiLtJ_P0042591 Zfp174 protein_coding protein_coding MGP_NODShiLtJ_T0013037.1 MGP_NODShiLtJ_G0011145.1 mouse_genomes_project 16 31364944 31365227 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098978.1 MGP_NODShiLtJ_G0037372.1 mouse_genomes_project 16 100785401 100785485 - Gm23587 snRNA snRNA MGP_NODShiLtJ_T0044698.1 MGP_NODShiLtJ_G0022838.1 mouse_genomes_project 16 101325316 101326668 - MGP_NODShiLtJ_P0044698 Krtap6-5 protein_coding protein_coding MGP_NODShiLtJ_T0044225.1 MGP_NODShiLtJ_G0022670.1 mouse_genomes_project 16 45789856 45824697 + MGP_NODShiLtJ_P0044225 Cd200r1 protein_coding protein_coding MGP_NODShiLtJ_T0100224.1 MGP_NODShiLtJ_G0038618.1 mouse_genomes_project 16 62305695 62305814 - Gm26019 snoRNA snoRNA MGP_NODShiLtJ_T0043557.1 MGP_NODShiLtJ_G0022504.1 mouse_genomes_project 16 21304711 21320722 + MGP_NODShiLtJ_P0043557 Fetub protein_coding protein_coding MGP_NODShiLtJ_T0043558.1 MGP_NODShiLtJ_G0022504.1 mouse_genomes_project 16 21306551 21320722 + MGP_NODShiLtJ_P0043558 Fetub protein_coding protein_coding MGP_NODShiLtJ_T0043559.1 MGP_NODShiLtJ_G0022504.1 mouse_genomes_project 16 21306609 21320716 + MGP_NODShiLtJ_P0043559 Fetub protein_coding protein_coding MGP_NODShiLtJ_T0043560.1 MGP_NODShiLtJ_G0022504.1 mouse_genomes_project 16 21308635 21320713 + MGP_NODShiLtJ_P0043560 Fetub protein_coding protein_coding MGP_NODShiLtJ_T0044454.1 MGP_NODShiLtJ_G0022735.1 mouse_genomes_project 16 62280416 62286759 + MGP_NODShiLtJ_P0044454 Cldnd1 protein_coding protein_coding MGP_NODShiLtJ_T0044455.1 MGP_NODShiLtJ_G0022735.1 mouse_genomes_project 16 62280431 62286115 + MGP_NODShiLtJ_P0044455 Cldnd1 protein_coding protein_coding MGP_NODShiLtJ_T0044456.1 MGP_NODShiLtJ_G0022735.1 mouse_genomes_project 16 62280529 62285496 + MGP_NODShiLtJ_P0044456 Cldnd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044457.1 MGP_NODShiLtJ_G0022735.1 mouse_genomes_project 16 62280545 62285415 + Cldnd1 protein_coding processed_transcript MGP_NODShiLtJ_T0044458.1 MGP_NODShiLtJ_G0022735.1 mouse_genomes_project 16 62280554 62283886 + MGP_NODShiLtJ_P0044458 Cldnd1 protein_coding protein_coding MGP_NODShiLtJ_T0044459.1 MGP_NODShiLtJ_G0022735.1 mouse_genomes_project 16 62284770 62285487 + Cldnd1 protein_coding retained_intron MGP_NODShiLtJ_T0043973.1 MGP_NODShiLtJ_G0022610.1 mouse_genomes_project 16 35994834 36003112 + MGP_NODShiLtJ_P0043973 protein_coding protein_coding MGP_NODShiLtJ_T0013076.1 MGP_NODShiLtJ_G0011184.1 mouse_genomes_project 16 94462306 94462872 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044586.1 MGP_NODShiLtJ_G0022787.1 mouse_genomes_project 16 86829619 86857350 - MGP_NODShiLtJ_P0044586 Gm11146 protein_coding protein_coding MGP_NODShiLtJ_T0043162.1 MGP_NODShiLtJ_G0022415.1 mouse_genomes_project 16 15330956 15334672 - Slc7a4 protein_coding retained_intron MGP_NODShiLtJ_T0043163.1 MGP_NODShiLtJ_G0022415.1 mouse_genomes_project 16 15331277 15334784 - MGP_NODShiLtJ_P0043163 Slc7a4 protein_coding protein_coding MGP_NODShiLtJ_T0043164.1 MGP_NODShiLtJ_G0022415.1 mouse_genomes_project 16 15333403 15334632 - MGP_NODShiLtJ_P0043164 Slc7a4 protein_coding protein_coding MGP_NODShiLtJ_T0043165.1 MGP_NODShiLtJ_G0022415.1 mouse_genomes_project 16 15333513 15334221 - MGP_NODShiLtJ_P0043165 Slc7a4 protein_coding protein_coding MGP_NODShiLtJ_T0043166.1 MGP_NODShiLtJ_G0022415.1 mouse_genomes_project 16 15333689 15334672 - MGP_NODShiLtJ_P0043166 Slc7a4 protein_coding protein_coding MGP_NODShiLtJ_T0044256.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46493682 46522918 - MGP_NODShiLtJ_P0044256 Cd200 protein_coding protein_coding MGP_NODShiLtJ_T0044257.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46493730 46522740 - MGP_NODShiLtJ_P0044257 Cd200 protein_coding protein_coding MGP_NODShiLtJ_T0044258.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46495185 46522837 - Cd200 protein_coding processed_transcript MGP_NODShiLtJ_T0044259.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46504154 46513251 - MGP_NODShiLtJ_P0044259 Cd200 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044260.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46504154 46522778 - MGP_NODShiLtJ_P0044260 Cd200 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044261.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46506529 46522888 - Cd200 protein_coding processed_transcript MGP_NODShiLtJ_T0044262.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46506757 46522906 - Cd200 protein_coding processed_transcript MGP_NODShiLtJ_T0044263.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46508862 46522882 - Cd200 protein_coding processed_transcript MGP_NODShiLtJ_T0044264.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46512510 46522729 - Cd200 protein_coding retained_intron MGP_NODShiLtJ_T0044265.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46513231 46522872 - Cd200 protein_coding processed_transcript MGP_NODShiLtJ_T0044266.1 MGP_NODShiLtJ_G0022678.1 mouse_genomes_project 16 46521103 46522883 - Cd200 protein_coding processed_transcript MGP_NODShiLtJ_T0042747.1 MGP_NODShiLtJ_G0022318.1 mouse_genomes_project 16 1776453 1788342 - MGP_NODShiLtJ_P0042747 AU021092 protein_coding protein_coding MGP_NODShiLtJ_T0003642.1 MGP_NODShiLtJ_G0003290.1 mouse_genomes_project 16 109113671 109130554 + Gm15341 antisense antisense MGP_NODShiLtJ_T0042695.1 MGP_NODShiLtJ_G0022302.1 mouse_genomes_project 16 1247991 1288283 + MGP_NODShiLtJ_P0042695 Hmox2 protein_coding protein_coding MGP_NODShiLtJ_T0042696.1 MGP_NODShiLtJ_G0022302.1 mouse_genomes_project 16 1247993 1290177 + MGP_NODShiLtJ_P0042696 Hmox2 protein_coding protein_coding MGP_NODShiLtJ_T0042697.1 MGP_NODShiLtJ_G0022302.1 mouse_genomes_project 16 1266173 1289684 + MGP_NODShiLtJ_P0042697 Hmox2 protein_coding protein_coding MGP_NODShiLtJ_T0042698.1 MGP_NODShiLtJ_G0022302.1 mouse_genomes_project 16 1279822 1288525 + MGP_NODShiLtJ_P0042698 Hmox2 protein_coding protein_coding MGP_NODShiLtJ_T0042699.1 MGP_NODShiLtJ_G0022302.1 mouse_genomes_project 16 1279822 1289680 + MGP_NODShiLtJ_P0042699 Hmox2 protein_coding protein_coding MGP_NODShiLtJ_T0044699.1 MGP_NODShiLtJ_G0022839.1 mouse_genomes_project 16 101348747 101349338 - MGP_NODShiLtJ_P0044699 1110025L11Rik protein_coding protein_coding MGP_NODShiLtJ_T0044573.1 MGP_NODShiLtJ_G0022783.1 mouse_genomes_project 16 84788491 84859958 - MGP_NODShiLtJ_P0044573 Samsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044574.1 MGP_NODShiLtJ_G0022783.1 mouse_genomes_project 16 84788492 84988230 - MGP_NODShiLtJ_P0044574 Samsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044575.1 MGP_NODShiLtJ_G0022783.1 mouse_genomes_project 16 84815475 84859888 - Samsn1 protein_coding retained_intron MGP_NODShiLtJ_T0044576.1 MGP_NODShiLtJ_G0022783.1 mouse_genomes_project 16 84816567 84859958 - Samsn1 protein_coding retained_intron MGP_NODShiLtJ_T0044577.1 MGP_NODShiLtJ_G0022783.1 mouse_genomes_project 16 84823471 84859927 - Samsn1 protein_coding retained_intron MGP_NODShiLtJ_T0003606.1 MGP_NODShiLtJ_G0003262.1 mouse_genomes_project 16 24642890 24646758 + Gm4524 antisense antisense MGP_NODShiLtJ_T0100217.1 MGP_NODShiLtJ_G0038611.1 mouse_genomes_project 16 54276898 54277031 - Gm23513 snoRNA snoRNA MGP_NODShiLtJ_T0044436.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 61977175 62035021 - MGP_NODShiLtJ_P0044436 St3gal6 protein_coding protein_coding MGP_NODShiLtJ_T0044437.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 61978803 62035838 - MGP_NODShiLtJ_P0044437 St3gal6 protein_coding protein_coding MGP_NODShiLtJ_T0044438.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 61979262 62035780 - MGP_NODShiLtJ_P0044438 St3gal6 protein_coding protein_coding MGP_NODShiLtJ_T0044439.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 61984907 62035148 - St3gal6 protein_coding processed_transcript MGP_NODShiLtJ_T0044440.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 61995514 61998520 - St3gal6 protein_coding retained_intron MGP_NODShiLtJ_T0044441.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 61998013 62035039 - St3gal6 protein_coding processed_transcript MGP_NODShiLtJ_T0044442.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 61998026 62035764 - MGP_NODShiLtJ_P0044442 St3gal6 protein_coding protein_coding MGP_NODShiLtJ_T0044443.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 62002785 62035764 - MGP_NODShiLtJ_P0044443 St3gal6 protein_coding protein_coding MGP_NODShiLtJ_T0044444.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 62002837 62009398 - St3gal6 protein_coding processed_transcript MGP_NODShiLtJ_T0044445.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 62002839 62034939 - St3gal6 protein_coding processed_transcript MGP_NODShiLtJ_T0044446.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 62002848 62035729 - St3gal6 protein_coding processed_transcript MGP_NODShiLtJ_T0044447.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 62002848 62035319 - St3gal6 protein_coding processed_transcript MGP_NODShiLtJ_T0044448.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 62012917 62035353 - St3gal6 protein_coding processed_transcript MGP_NODShiLtJ_T0044449.1 MGP_NODShiLtJ_G0022730.1 mouse_genomes_project 16 62012917 62018604 - St3gal6 protein_coding retained_intron MGP_NODShiLtJ_T0013043.1 MGP_NODShiLtJ_G0011151.1 mouse_genomes_project 16 38846361 38846916 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013074.1 MGP_NODShiLtJ_G0011182.1 mouse_genomes_project 16 88386116 88386475 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098973.1 MGP_NODShiLtJ_G0037367.1 mouse_genomes_project 16 71949893 71950000 + Gm22448 snRNA snRNA MGP_NODShiLtJ_T0100192.1 MGP_NODShiLtJ_G0038586.1 mouse_genomes_project 16 5186936 5187080 + Gm24579 snoRNA snoRNA MGP_NODShiLtJ_T0042728.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1553944 1558752 - MGP_NODShiLtJ_P0042728 Rogdi protein_coding protein_coding MGP_NODShiLtJ_T0042729.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1553944 1558762 - MGP_NODShiLtJ_P0042729 Rogdi protein_coding protein_coding MGP_NODShiLtJ_T0042730.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1553969 1558752 - MGP_NODShiLtJ_P0042730 Rogdi protein_coding protein_coding MGP_NODShiLtJ_T0042731.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1554199 1555887 - Rogdi protein_coding retained_intron MGP_NODShiLtJ_T0042732.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1554438 1555344 - Rogdi protein_coding retained_intron MGP_NODShiLtJ_T0042733.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1555133 1557051 - Rogdi protein_coding retained_intron MGP_NODShiLtJ_T0042734.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1555270 1556967 - Rogdi protein_coding retained_intron MGP_NODShiLtJ_T0042735.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1556082 1558720 - MGP_NODShiLtJ_P0042735 Rogdi protein_coding protein_coding MGP_NODShiLtJ_T0042736.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1556934 1558788 - Rogdi protein_coding retained_intron MGP_NODShiLtJ_T0042737.1 MGP_NODShiLtJ_G0022312.1 mouse_genomes_project 16 1557404 1558771 - Rogdi protein_coding retained_intron MGP_NODShiLtJ_T0043359.1 MGP_NODShiLtJ_G0022460.1 mouse_genomes_project 16 17540382 17541727 - MGP_NODShiLtJ_P0043359 Olfr166 protein_coding protein_coding MGP_NODShiLtJ_T0010046.1 MGP_NODShiLtJ_G0008179.1 mouse_genomes_project 16 44558825 44558908 + Mir568 miRNA miRNA MGP_NODShiLtJ_T0044733.1 MGP_NODShiLtJ_G0022856.1 mouse_genomes_project 16 103256387 103264488 - Mis18a protein_coding retained_intron MGP_NODShiLtJ_T0044734.1 MGP_NODShiLtJ_G0022856.1 mouse_genomes_project 16 103256387 103264488 - MGP_NODShiLtJ_P0044734 Mis18a protein_coding protein_coding MGP_NODShiLtJ_T0044735.1 MGP_NODShiLtJ_G0022856.1 mouse_genomes_project 16 103258520 103264223 - Mis18a protein_coding retained_intron MGP_NODShiLtJ_T0043222.1 MGP_NODShiLtJ_G0022425.1 mouse_genomes_project 16 15680077 15681464 + MGP_NODShiLtJ_P0043222 Tssk2 protein_coding protein_coding MGP_NODShiLtJ_T0043638.1 MGP_NODShiLtJ_G0022528.1 mouse_genomes_project 16 26254821 26277438 - MGP_NODShiLtJ_P0043638 Uts2b protein_coding protein_coding MGP_NODShiLtJ_T0044972.1 MGP_NODShiLtJ_G0022901.1 mouse_genomes_project 16 107390430 107422186 - MGP_NODShiLtJ_P0044972 Dscr3 protein_coding protein_coding MGP_NODShiLtJ_T0044973.1 MGP_NODShiLtJ_G0022901.1 mouse_genomes_project 16 107395462 107404192 - Dscr3 protein_coding processed_transcript MGP_NODShiLtJ_T0044974.1 MGP_NODShiLtJ_G0022901.1 mouse_genomes_project 16 107397542 107421788 - Dscr3 protein_coding retained_intron MGP_NODShiLtJ_T0044975.1 MGP_NODShiLtJ_G0022901.1 mouse_genomes_project 16 107403464 107421797 - Dscr3 protein_coding retained_intron MGP_NODShiLtJ_T0044976.1 MGP_NODShiLtJ_G0022901.1 mouse_genomes_project 16 107405158 107421773 - Dscr3 protein_coding retained_intron MGP_NODShiLtJ_T0017388.1 MGP_NODShiLtJ_G0015200.1 mouse_genomes_project 16 104601806 104639426 + D430001F17Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0000935.1 MGP_NODShiLtJ_G0000863.1 mouse_genomes_project 16 40774229 40774668 + TEC TEC MGP_NODShiLtJ_T0012997.1 MGP_NODShiLtJ_G0011105.1 mouse_genomes_project 16 5436611 5437152 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042680.1 MGP_NODShiLtJ_G0022299.1 mouse_genomes_project 16 1154802 1165671 + MGP_NODShiLtJ_P0042680 Vasn protein_coding protein_coding MGP_NODShiLtJ_T0042681.1 MGP_NODShiLtJ_G0022299.1 mouse_genomes_project 16 1154829 1162428 + Vasn protein_coding processed_transcript MGP_NODShiLtJ_T0044197.1 MGP_NODShiLtJ_G0022665.1 mouse_genomes_project 16 45340172 45383508 + MGP_NODShiLtJ_P0044197 Spice1 protein_coding protein_coding MGP_NODShiLtJ_T0044198.1 MGP_NODShiLtJ_G0022665.1 mouse_genomes_project 16 45340465 45364850 + Spice1 protein_coding processed_transcript MGP_NODShiLtJ_T0044199.1 MGP_NODShiLtJ_G0022665.1 mouse_genomes_project 16 45341097 45361832 + Spice1 protein_coding processed_transcript MGP_NODShiLtJ_T0044200.1 MGP_NODShiLtJ_G0022665.1 mouse_genomes_project 16 45361734 45364488 + Spice1 protein_coding retained_intron MGP_NODShiLtJ_T0044201.1 MGP_NODShiLtJ_G0022665.1 mouse_genomes_project 16 45361804 45364855 + Spice1 protein_coding retained_intron MGP_NODShiLtJ_T0044202.1 MGP_NODShiLtJ_G0022665.1 mouse_genomes_project 16 45364105 45380694 + Spice1 protein_coding retained_intron MGP_NODShiLtJ_T0044203.1 MGP_NODShiLtJ_G0022665.1 mouse_genomes_project 16 45364547 45367719 + Spice1 protein_coding processed_transcript MGP_NODShiLtJ_T0044204.1 MGP_NODShiLtJ_G0022665.1 mouse_genomes_project 16 45380371 45382120 + Spice1 protein_coding retained_intron MGP_NODShiLtJ_T0044125.1 MGP_NODShiLtJ_G0022651.1 mouse_genomes_project 16 39066442 39215018 + MGP_NODShiLtJ_P0044125 Igsf11 protein_coding protein_coding MGP_NODShiLtJ_T0044126.1 MGP_NODShiLtJ_G0022651.1 mouse_genomes_project 16 39067271 39216843 + MGP_NODShiLtJ_P0044126 Igsf11 protein_coding protein_coding MGP_NODShiLtJ_T0017385.1 MGP_NODShiLtJ_G0015197.1 mouse_genomes_project 16 104093424 104098805 + A930006K02Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0043289.1 MGP_NODShiLtJ_G0022441.1 mouse_genomes_project 16 16247721 16254091 - MGP_NODShiLtJ_P0043289 Comt protein_coding protein_coding MGP_NODShiLtJ_T0043290.1 MGP_NODShiLtJ_G0022441.1 mouse_genomes_project 16 16248082 16268854 - MGP_NODShiLtJ_P0043290 Comt protein_coding protein_coding MGP_NODShiLtJ_T0043291.1 MGP_NODShiLtJ_G0022441.1 mouse_genomes_project 16 16248140 16268387 - MGP_NODShiLtJ_P0043291 Comt protein_coding protein_coding MGP_NODShiLtJ_T0043292.1 MGP_NODShiLtJ_G0022441.1 mouse_genomes_project 16 16251359 16254091 - MGP_NODShiLtJ_P0043292 Comt protein_coding protein_coding MGP_NODShiLtJ_T0003590.1 MGP_NODShiLtJ_G0003248.1 mouse_genomes_project 16 486913 491594 - Gm15879 antisense antisense MGP_NODShiLtJ_T0003591.1 MGP_NODShiLtJ_G0003248.1 mouse_genomes_project 16 488445 491922 - Gm15879 antisense antisense MGP_NODShiLtJ_T0044096.1 MGP_NODShiLtJ_G0022645.1 mouse_genomes_project 16 38676546 38701660 - MGP_NODShiLtJ_P0044096 Poglut1 protein_coding protein_coding MGP_NODShiLtJ_T0044097.1 MGP_NODShiLtJ_G0022645.1 mouse_genomes_project 16 38676549 38701624 - Poglut1 protein_coding retained_intron MGP_NODShiLtJ_T0044098.1 MGP_NODShiLtJ_G0022645.1 mouse_genomes_project 16 38680869 38683925 - Poglut1 protein_coding retained_intron MGP_NODShiLtJ_T0044099.1 MGP_NODShiLtJ_G0022645.1 mouse_genomes_project 16 38685529 38689398 - Poglut1 protein_coding retained_intron MGP_NODShiLtJ_T0044100.1 MGP_NODShiLtJ_G0022645.1 mouse_genomes_project 16 38699421 38701624 - Poglut1 protein_coding retained_intron MGP_NODShiLtJ_T0042897.1 MGP_NODShiLtJ_G0022357.1 mouse_genomes_project 16 8923249 9028415 - MGP_NODShiLtJ_P0042897 Cpped1 protein_coding protein_coding MGP_NODShiLtJ_T0042898.1 MGP_NODShiLtJ_G0022357.1 mouse_genomes_project 16 8923255 9028414 - MGP_NODShiLtJ_P0042898 Cpped1 protein_coding protein_coding MGP_NODShiLtJ_T0042899.1 MGP_NODShiLtJ_G0022357.1 mouse_genomes_project 16 8947151 9028388 - Cpped1 protein_coding retained_intron MGP_NODShiLtJ_T0042900.1 MGP_NODShiLtJ_G0022357.1 mouse_genomes_project 16 8948140 9028390 - MGP_NODShiLtJ_P0042900 Cpped1 protein_coding protein_coding MGP_NODShiLtJ_T0042901.1 MGP_NODShiLtJ_G0022357.1 mouse_genomes_project 16 9003723 9028437 - MGP_NODShiLtJ_P0042901 Cpped1 protein_coding protein_coding MGP_NODShiLtJ_T0045008.1 MGP_NODShiLtJ_G0022906.1 mouse_genomes_project 16 108676226 108685011 + Ets2 protein_coding retained_intron MGP_NODShiLtJ_T0045009.1 MGP_NODShiLtJ_G0022906.1 mouse_genomes_project 16 108676271 108687413 + Ets2 protein_coding retained_intron MGP_NODShiLtJ_T0045010.1 MGP_NODShiLtJ_G0022906.1 mouse_genomes_project 16 108680188 108695616 + MGP_NODShiLtJ_P0045010 Ets2 protein_coding protein_coding MGP_NODShiLtJ_T0045011.1 MGP_NODShiLtJ_G0022906.1 mouse_genomes_project 16 108681025 108690635 + MGP_NODShiLtJ_P0045011 Ets2 protein_coding protein_coding MGP_NODShiLtJ_T0045012.1 MGP_NODShiLtJ_G0022906.1 mouse_genomes_project 16 108690416 108693685 + Ets2 protein_coding retained_intron MGP_NODShiLtJ_T0043488.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18825035 18839629 - MGP_NODShiLtJ_P0043488 Clcn2 protein_coding protein_coding MGP_NODShiLtJ_T0043489.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18825059 18839626 - Clcn2 protein_coding retained_intron MGP_NODShiLtJ_T0043490.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18825069 18839676 - Clcn2 protein_coding retained_intron MGP_NODShiLtJ_T0043491.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18825294 18839623 - MGP_NODShiLtJ_P0043491 Clcn2 protein_coding protein_coding MGP_NODShiLtJ_T0043492.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18827609 18841281 - MGP_NODShiLtJ_P0043492 Clcn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043493.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18829245 18831198 - Clcn2 protein_coding retained_intron MGP_NODShiLtJ_T0043494.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18829777 18830806 - Clcn2 protein_coding retained_intron MGP_NODShiLtJ_T0043495.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18832162 18834037 - Clcn2 protein_coding retained_intron MGP_NODShiLtJ_T0043496.1 MGP_NODShiLtJ_G0022483.1 mouse_genomes_project 16 18834382 18835740 - Clcn2 protein_coding retained_intron MGP_NODShiLtJ_T0044252.1 MGP_NODShiLtJ_G0022676.1 mouse_genomes_project 16 46240749 46272430 + MGP_NODShiLtJ_P0044252 Atg3 protein_coding protein_coding MGP_NODShiLtJ_T0044253.1 MGP_NODShiLtJ_G0022676.1 mouse_genomes_project 16 46248976 46271785 + Atg3 protein_coding retained_intron MGP_NODShiLtJ_T0043703.1 MGP_NODShiLtJ_G0022544.1 mouse_genomes_project 16 29859588 29862680 + MGP_NODShiLtJ_P0043703 Fam43a protein_coding protein_coding MGP_NODShiLtJ_T0043549.1 MGP_NODShiLtJ_G0022500.1 mouse_genomes_project 16 21183755 21191430 - MGP_NODShiLtJ_P0043549 Crygs protein_coding protein_coding MGP_NODShiLtJ_T0044453.1 MGP_NODShiLtJ_G0022734.1 mouse_genomes_project 16 62267944 62269234 - MGP_NODShiLtJ_P0044453 Gpr15 protein_coding protein_coding MGP_NODShiLtJ_T0044702.1 MGP_NODShiLtJ_G0022841.1 mouse_genomes_project 16 101434261 101435676 + MGP_NODShiLtJ_P0044702 Gm6358 protein_coding protein_coding MGP_NODShiLtJ_T0044703.1 MGP_NODShiLtJ_G0022841.1 mouse_genomes_project 16 101435313 101435814 + MGP_NODShiLtJ_P0044703 Gm6358 protein_coding protein_coding MGP_NODShiLtJ_T0042776.1 MGP_NODShiLtJ_G0022327.1 mouse_genomes_project 16 5451810 5472800 + MGP_NODShiLtJ_P0042776 Pmm2 protein_coding protein_coding MGP_NODShiLtJ_T0042777.1 MGP_NODShiLtJ_G0022327.1 mouse_genomes_project 16 5451859 5464384 + Pmm2 protein_coding retained_intron MGP_NODShiLtJ_T0042778.1 MGP_NODShiLtJ_G0022327.1 mouse_genomes_project 16 5451874 5459153 + Pmm2 protein_coding retained_intron MGP_NODShiLtJ_T0042779.1 MGP_NODShiLtJ_G0022327.1 mouse_genomes_project 16 5452178 5466696 + Pmm2 protein_coding processed_transcript MGP_NODShiLtJ_T0042780.1 MGP_NODShiLtJ_G0022327.1 mouse_genomes_project 16 5460107 5463979 + Pmm2 protein_coding retained_intron MGP_NODShiLtJ_T0042781.1 MGP_NODShiLtJ_G0022327.1 mouse_genomes_project 16 5463860 5472011 + Pmm2 protein_coding retained_intron MGP_NODShiLtJ_T0044547.1 MGP_NODShiLtJ_G0022776.1 mouse_genomes_project 16 77153590 77167232 - MGP_NODShiLtJ_P0044547 Speer2 protein_coding protein_coding MGP_NODShiLtJ_T0100234.1 MGP_NODShiLtJ_G0038628.1 mouse_genomes_project 16 89890117 89890233 + Gm23083 snoRNA snoRNA MGP_NODShiLtJ_T0097777.1 MGP_NODShiLtJ_G0036189.1 mouse_genomes_project 16 101780876 101781272 - pseudogene pseudogene MGP_NODShiLtJ_T0006787.1 MGP_NODShiLtJ_G0005590.1 mouse_genomes_project 16 35574992 35577989 - Gm26838 lincRNA lincRNA MGP_NODShiLtJ_T0098975.1 MGP_NODShiLtJ_G0037369.1 mouse_genomes_project 16 87998216 87998323 + Gm24861 snRNA snRNA MGP_NODShiLtJ_T0017360.1 MGP_NODShiLtJ_G0015189.1 mouse_genomes_project 16 59183196 59199757 + Gm28037 processed_transcript processed_transcript MGP_NODShiLtJ_T0098950.1 MGP_NODShiLtJ_G0037344.1 mouse_genomes_project 16 35108796 35108949 - Gm23518 snRNA snRNA MGP_NODShiLtJ_T0042767.1 MGP_NODShiLtJ_G0022324.1 mouse_genomes_project 16 5321709 5435000 + MGP_NODShiLtJ_P0042767 Abat protein_coding protein_coding MGP_NODShiLtJ_T0042768.1 MGP_NODShiLtJ_G0022324.1 mouse_genomes_project 16 5321761 5415306 + MGP_NODShiLtJ_P0042768 Abat protein_coding protein_coding MGP_NODShiLtJ_T0042769.1 MGP_NODShiLtJ_G0022324.1 mouse_genomes_project 16 5321763 5392009 + Abat protein_coding retained_intron MGP_NODShiLtJ_T0042770.1 MGP_NODShiLtJ_G0022324.1 mouse_genomes_project 16 5321765 5433002 + MGP_NODShiLtJ_P0042770 Abat protein_coding protein_coding MGP_NODShiLtJ_T0042771.1 MGP_NODShiLtJ_G0022324.1 mouse_genomes_project 16 5384218 5419087 + MGP_NODShiLtJ_P0042771 Abat protein_coding protein_coding MGP_NODShiLtJ_T0042772.1 MGP_NODShiLtJ_G0022324.1 mouse_genomes_project 16 5396920 5415306 + MGP_NODShiLtJ_P0042772 Abat protein_coding protein_coding MGP_NODShiLtJ_T0042773.1 MGP_NODShiLtJ_G0022324.1 mouse_genomes_project 16 5426302 5432009 + Abat protein_coding processed_transcript MGP_NODShiLtJ_T0043393.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18421730 18527177 - MGP_NODShiLtJ_P0043393 Abcc5 protein_coding protein_coding MGP_NODShiLtJ_T0043394.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18421733 18527118 - MGP_NODShiLtJ_P0043394 Abcc5 protein_coding protein_coding MGP_NODShiLtJ_T0043395.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18421735 18500385 - Abcc5 protein_coding retained_intron MGP_NODShiLtJ_T0043396.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18432495 18458882 - Abcc5 protein_coding processed_transcript MGP_NODShiLtJ_T0043397.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18438378 18459076 - Abcc5 protein_coding retained_intron MGP_NODShiLtJ_T0043398.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18463752 18473107 - Abcc5 protein_coding retained_intron MGP_NODShiLtJ_T0043399.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18474948 18497223 - Abcc5 protein_coding retained_intron MGP_NODShiLtJ_T0043400.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18493494 18526769 - MGP_NODShiLtJ_P0043400 Abcc5 protein_coding protein_coding MGP_NODShiLtJ_T0043401.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18499580 18501050 - Abcc5 protein_coding retained_intron MGP_NODShiLtJ_T0043402.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18501523 18527107 - Abcc5 protein_coding retained_intron MGP_NODShiLtJ_T0043403.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18501524 18527137 - MGP_NODShiLtJ_P0043403 Abcc5 protein_coding protein_coding MGP_NODShiLtJ_T0043404.1 MGP_NODShiLtJ_G0022471.1 mouse_genomes_project 16 18501525 18505492 - Abcc5 protein_coding processed_transcript MGP_NODShiLtJ_T0043654.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28577716 28640178 - MGP_NODShiLtJ_P0043654 Atp13a4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043655.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28577891 28724612 - MGP_NODShiLtJ_P0043655 Atp13a4 protein_coding protein_coding MGP_NODShiLtJ_T0043656.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28577904 28724498 - MGP_NODShiLtJ_P0043656 Atp13a4 protein_coding protein_coding MGP_NODShiLtJ_T0043657.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28577909 28591676 - Atp13a4 protein_coding processed_transcript MGP_NODShiLtJ_T0043658.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28577925 28728682 - MGP_NODShiLtJ_P0043658 Atp13a4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043659.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28578251 28590190 - Atp13a4 protein_coding retained_intron MGP_NODShiLtJ_T0043660.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28592018 28624520 - Atp13a4 protein_coding retained_intron MGP_NODShiLtJ_T0043661.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28609234 28625557 - MGP_NODShiLtJ_P0043661 Atp13a4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043662.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28609243 28728682 - MGP_NODShiLtJ_P0043662 Atp13a4 protein_coding protein_coding MGP_NODShiLtJ_T0043663.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28723440 28728616 - Atp13a4 protein_coding retained_intron MGP_NODShiLtJ_T0043664.1 MGP_NODShiLtJ_G0022534.1 mouse_genomes_project 16 28723493 28728677 - Atp13a4 protein_coding retained_intron MGP_NODShiLtJ_T0042890.1 MGP_NODShiLtJ_G0022356.1 mouse_genomes_project 16 8414490 8874016 + MGP_NODShiLtJ_P0042890 Snx29 protein_coding protein_coding MGP_NODShiLtJ_T0042891.1 MGP_NODShiLtJ_G0022356.1 mouse_genomes_project 16 8414554 8501883 + MGP_NODShiLtJ_P0042891 Snx29 protein_coding protein_coding MGP_NODShiLtJ_T0042892.1 MGP_NODShiLtJ_G0022356.1 mouse_genomes_project 16 8503694 8874016 + MGP_NODShiLtJ_P0042892 Snx29 protein_coding protein_coding MGP_NODShiLtJ_T0042893.1 MGP_NODShiLtJ_G0022356.1 mouse_genomes_project 16 8504703 8780075 + MGP_NODShiLtJ_P0042893 Snx29 protein_coding protein_coding MGP_NODShiLtJ_T0042894.1 MGP_NODShiLtJ_G0022356.1 mouse_genomes_project 16 8520046 8800485 + MGP_NODShiLtJ_P0042894 Snx29 protein_coding protein_coding MGP_NODShiLtJ_T0042895.1 MGP_NODShiLtJ_G0022356.1 mouse_genomes_project 16 8551034 8743446 + Snx29 protein_coding retained_intron MGP_NODShiLtJ_T0042896.1 MGP_NODShiLtJ_G0022356.1 mouse_genomes_project 16 8553157 8780016 + Snx29 protein_coding retained_intron MGP_NODShiLtJ_T0044556.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82222199 82904759 - MGP_NODShiLtJ_P0044556 Robo2 protein_coding protein_coding MGP_NODShiLtJ_T0044557.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82226324 82905062 - MGP_NODShiLtJ_P0044557 Robo2 protein_coding protein_coding MGP_NODShiLtJ_T0044558.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82226607 82245465 - Robo2 protein_coding retained_intron MGP_NODShiLtJ_T0044559.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82240487 82478167 - MGP_NODShiLtJ_P0044559 Robo2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044560.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82242521 82253640 - Robo2 protein_coding processed_transcript MGP_NODShiLtJ_T0044561.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82269176 82905555 - MGP_NODShiLtJ_P0044561 Robo2 protein_coding protein_coding MGP_NODShiLtJ_T0044562.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82269431 82311999 - Robo2 protein_coding retained_intron MGP_NODShiLtJ_T0044563.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82380747 82443743 - Robo2 protein_coding processed_transcript MGP_NODShiLtJ_T0044564.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82461873 82905207 - Robo2 protein_coding retained_intron MGP_NODShiLtJ_T0044565.1 MGP_NODShiLtJ_G0022779.1 mouse_genomes_project 16 82825406 82905595 - Robo2 protein_coding retained_intron MGP_NODShiLtJ_T0000933.1 MGP_NODShiLtJ_G0000861.1 mouse_genomes_project 16 17176890 17179097 + TEC TEC MGP_NODShiLtJ_T0043970.1 MGP_NODShiLtJ_G0022608.1 mouse_genomes_project 16 35935562 35948646 - MGP_NODShiLtJ_P0043970 Csta1 protein_coding protein_coding MGP_NODShiLtJ_T0043971.1 MGP_NODShiLtJ_G0022608.1 mouse_genomes_project 16 35937785 35948610 - MGP_NODShiLtJ_P0043971 Csta1 protein_coding protein_coding MGP_NODShiLtJ_T0044011.1 MGP_NODShiLtJ_G0022621.1 mouse_genomes_project 16 36690814 36694365 + protein_coding processed_transcript MGP_NODShiLtJ_T0044012.1 MGP_NODShiLtJ_G0022621.1 mouse_genomes_project 16 36690836 36772961 + MGP_NODShiLtJ_P0044012 protein_coding protein_coding MGP_NODShiLtJ_T0044013.1 MGP_NODShiLtJ_G0022621.1 mouse_genomes_project 16 36690837 36772953 + MGP_NODShiLtJ_P0044013 protein_coding protein_coding MGP_NODShiLtJ_T0044014.1 MGP_NODShiLtJ_G0022621.1 mouse_genomes_project 16 36716763 36758954 + MGP_NODShiLtJ_P0044014 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044015.1 MGP_NODShiLtJ_G0022621.1 mouse_genomes_project 16 36748470 36759114 + protein_coding processed_transcript MGP_NODShiLtJ_T0044016.1 MGP_NODShiLtJ_G0022621.1 mouse_genomes_project 16 36748784 36755979 + protein_coding processed_transcript MGP_NODShiLtJ_T0042584.1 MGP_NODShiLtJ_G0022280.1 mouse_genomes_project 16 169302 177347 + Zfp263 protein_coding retained_intron MGP_NODShiLtJ_T0042585.1 MGP_NODShiLtJ_G0022280.1 mouse_genomes_project 16 169309 176451 + Zfp263 protein_coding processed_transcript MGP_NODShiLtJ_T0042586.1 MGP_NODShiLtJ_G0022280.1 mouse_genomes_project 16 169359 177347 + MGP_NODShiLtJ_P0042586 Zfp263 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042587.1 MGP_NODShiLtJ_G0022280.1 mouse_genomes_project 16 169487 175838 + Zfp263 protein_coding processed_transcript MGP_NODShiLtJ_T0042588.1 MGP_NODShiLtJ_G0022280.1 mouse_genomes_project 16 169502 177349 + MGP_NODShiLtJ_P0042588 Zfp263 protein_coding protein_coding MGP_NODShiLtJ_T0042589.1 MGP_NODShiLtJ_G0022280.1 mouse_genomes_project 16 169724 175663 + Zfp263 protein_coding processed_transcript MGP_NODShiLtJ_T0043637.1 MGP_NODShiLtJ_G0022527.1 mouse_genomes_project 16 26182093 26251939 + MGP_NODShiLtJ_P0043637 Ostn protein_coding protein_coding MGP_NODShiLtJ_T0013072.1 MGP_NODShiLtJ_G0011180.1 mouse_genomes_project 16 84673764 84674677 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006766.1 MGP_NODShiLtJ_G0005572.1 mouse_genomes_project 16 10009632 10049865 + 1700003L19Rik lincRNA lincRNA MGP_NODShiLtJ_T0044226.1 MGP_NODShiLtJ_G0022671.1 mouse_genomes_project 16 45856385 45902718 + MGP_NODShiLtJ_P0044226 Cd200r4 protein_coding protein_coding MGP_NODShiLtJ_T0013006.1 MGP_NODShiLtJ_G0011114.1 mouse_genomes_project 16 9957468 9958803 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013016.1 MGP_NODShiLtJ_G0011124.1 mouse_genomes_project 16 14782568 14783261 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043407.1 MGP_NODShiLtJ_G0022473.1 mouse_genomes_project 16 18632642 18646835 + MGP_NODShiLtJ_P0043407 Dvl3 protein_coding protein_coding MGP_NODShiLtJ_T0043408.1 MGP_NODShiLtJ_G0022473.1 mouse_genomes_project 16 18632724 18647705 + MGP_NODShiLtJ_P0043408 Dvl3 protein_coding protein_coding MGP_NODShiLtJ_T0043409.1 MGP_NODShiLtJ_G0022473.1 mouse_genomes_project 16 18632766 18646831 + MGP_NODShiLtJ_P0043409 Dvl3 protein_coding protein_coding MGP_NODShiLtJ_T0043410.1 MGP_NODShiLtJ_G0022473.1 mouse_genomes_project 16 18632846 18640504 + Dvl3 protein_coding retained_intron MGP_NODShiLtJ_T0044118.1 MGP_NODShiLtJ_G0022648.1 mouse_genomes_project 16 38898898 38929173 + MGP_NODShiLtJ_P0044118 B4galt4 protein_coding protein_coding MGP_NODShiLtJ_T0044119.1 MGP_NODShiLtJ_G0022648.1 mouse_genomes_project 16 38898940 38929167 + MGP_NODShiLtJ_P0044119 B4galt4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044120.1 MGP_NODShiLtJ_G0022648.1 mouse_genomes_project 16 38921124 38928630 + MGP_NODShiLtJ_P0044120 B4galt4 protein_coding protein_coding MGP_NODShiLtJ_T0044121.1 MGP_NODShiLtJ_G0022648.1 mouse_genomes_project 16 38923205 38926597 + B4galt4 protein_coding retained_intron MGP_NODShiLtJ_T0013066.1 MGP_NODShiLtJ_G0011174.1 mouse_genomes_project 16 65373697 65373956 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042952.1 MGP_NODShiLtJ_G0022369.1 mouse_genomes_project 16 11230966 11291708 + MGP_NODShiLtJ_P0042952 Mpv17l protein_coding protein_coding MGP_NODShiLtJ_T0042953.1 MGP_NODShiLtJ_G0022369.1 mouse_genomes_project 16 11281606 11291185 + MGP_NODShiLtJ_P0042953 Mpv17l protein_coding protein_coding MGP_NODShiLtJ_T0042954.1 MGP_NODShiLtJ_G0022369.1 mouse_genomes_project 16 11281671 11291044 + MGP_NODShiLtJ_P0042954 Mpv17l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042955.1 MGP_NODShiLtJ_G0022369.1 mouse_genomes_project 16 11281678 11289341 + MGP_NODShiLtJ_P0042955 Mpv17l protein_coding protein_coding MGP_NODShiLtJ_T0042956.1 MGP_NODShiLtJ_G0022369.1 mouse_genomes_project 16 11281690 11289387 + MGP_NODShiLtJ_P0042956 Mpv17l protein_coding protein_coding MGP_NODShiLtJ_T0042957.1 MGP_NODShiLtJ_G0022369.1 mouse_genomes_project 16 11282070 11289307 + MGP_NODShiLtJ_P0042957 Mpv17l protein_coding protein_coding MGP_NODShiLtJ_T0101672.1 MGP_NODShiLtJ_G0039841.1 mouse_genomes_project 16 25448 26382 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0043722.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31024375 31241448 + MGP_NODShiLtJ_P0043722 Dlg1 protein_coding protein_coding MGP_NODShiLtJ_T0043723.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31024843 31239058 + MGP_NODShiLtJ_P0043723 Dlg1 protein_coding protein_coding MGP_NODShiLtJ_T0043724.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31024869 31241454 + MGP_NODShiLtJ_P0043724 Dlg1 protein_coding protein_coding MGP_NODShiLtJ_T0043725.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31024889 31241447 + MGP_NODShiLtJ_P0043725 Dlg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043726.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31024973 31241444 + MGP_NODShiLtJ_P0043726 Dlg1 protein_coding protein_coding MGP_NODShiLtJ_T0043727.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31025084 31239895 + MGP_NODShiLtJ_P0043727 Dlg1 protein_coding protein_coding MGP_NODShiLtJ_T0043728.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31046290 31140862 + Dlg1 protein_coding retained_intron MGP_NODShiLtJ_T0043729.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31120273 31239473 + MGP_NODShiLtJ_P0043729 Dlg1 protein_coding protein_coding MGP_NODShiLtJ_T0043730.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31160301 31208111 + MGP_NODShiLtJ_P0043730 Dlg1 protein_coding protein_coding MGP_NODShiLtJ_T0043731.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31193112 31201801 + Dlg1 protein_coding retained_intron MGP_NODShiLtJ_T0043732.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31201579 31225345 + MGP_NODShiLtJ_P0043732 Dlg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043733.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31203468 31218161 + Dlg1 protein_coding processed_transcript MGP_NODShiLtJ_T0043734.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31212466 31225300 + Dlg1 protein_coding retained_intron MGP_NODShiLtJ_T0043735.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31219734 31230419 + Dlg1 protein_coding retained_intron MGP_NODShiLtJ_T0043736.1 MGP_NODShiLtJ_G0022550.1 mouse_genomes_project 16 31234681 31239060 + Dlg1 protein_coding retained_intron MGP_NODShiLtJ_T0100218.1 MGP_NODShiLtJ_G0038612.1 mouse_genomes_project 16 55260453 55260579 - Gm25723 snoRNA snoRNA MGP_NODShiLtJ_T0003644.1 MGP_NODShiLtJ_G0003292.1 mouse_genomes_project 16 111140094 111142925 - C030010L15Rik antisense antisense MGP_NODShiLtJ_T0003645.1 MGP_NODShiLtJ_G0003292.1 mouse_genomes_project 16 111140156 111140637 - C030010L15Rik antisense antisense MGP_NODShiLtJ_T0098936.1 MGP_NODShiLtJ_G0037330.1 mouse_genomes_project 16 14699439 14699534 - Gm22558 snRNA snRNA MGP_NODShiLtJ_T0042960.1 MGP_NODShiLtJ_G0022371.1 mouse_genomes_project 16 11332217 11458752 + MGP_NODShiLtJ_P0042960 2900011O08Rik protein_coding protein_coding MGP_NODShiLtJ_T0000015.1 MGP_NODShiLtJ_G0000010.1 mouse_genomes_project 16 16970683 16971137 - MGP_NODShiLtJ_P0000015 Iglc1 IG_C_gene IG_C_gene MGP_NODShiLtJ_T0006791.1 MGP_NODShiLtJ_G0005594.1 mouse_genomes_project 16 45316451 45319502 + Gm26732 lincRNA lincRNA MGP_NODShiLtJ_T0045013.1 MGP_NODShiLtJ_G0022907.1 mouse_genomes_project 16 108971370 108988487 - MGP_NODShiLtJ_P0045013 Psmg1 protein_coding protein_coding MGP_NODShiLtJ_T0045014.1 MGP_NODShiLtJ_G0022907.1 mouse_genomes_project 16 108971474 108988417 - MGP_NODShiLtJ_P0045014 Psmg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045015.1 MGP_NODShiLtJ_G0022907.1 mouse_genomes_project 16 108971474 108988417 - MGP_NODShiLtJ_P0045015 Psmg1 protein_coding protein_coding MGP_NODShiLtJ_T0045016.1 MGP_NODShiLtJ_G0022907.1 mouse_genomes_project 16 108985512 108987425 - Psmg1 protein_coding retained_intron MGP_NODShiLtJ_T0044884.1 MGP_NODShiLtJ_G0022883.1 mouse_genomes_project 16 105007472 105020702 + MGP_NODShiLtJ_P0044884 Smim11 protein_coding protein_coding MGP_NODShiLtJ_T0044885.1 MGP_NODShiLtJ_G0022883.1 mouse_genomes_project 16 105007482 105019085 + MGP_NODShiLtJ_P0044885 Smim11 protein_coding protein_coding MGP_NODShiLtJ_T0044670.1 MGP_NODShiLtJ_G0022812.1 mouse_genomes_project 16 100670583 100671755 - MGP_NODShiLtJ_P0044670 Cldn17 protein_coding protein_coding MGP_NODShiLtJ_T0100231.1 MGP_NODShiLtJ_G0038625.1 mouse_genomes_project 16 85108334 85108465 - Gm22268 snoRNA snoRNA MGP_NODShiLtJ_T0043339.1 MGP_NODShiLtJ_G0022451.1 mouse_genomes_project 16 16726927 16727734 + MGP_NODShiLtJ_P0043339 protein_coding protein_coding MGP_NODShiLtJ_T0043340.1 MGP_NODShiLtJ_G0022451.1 mouse_genomes_project 16 16726927 16735278 + MGP_NODShiLtJ_P0043340 protein_coding protein_coding MGP_NODShiLtJ_T0043342.1 MGP_NODShiLtJ_G0022451.1 mouse_genomes_project 16 16727001 16730139 + protein_coding retained_intron MGP_NODShiLtJ_T0043221.1 MGP_NODShiLtJ_G0022424.1 mouse_genomes_project 16 15675663 15679363 + MGP_NODShiLtJ_P0043221 Tssk1 protein_coding protein_coding MGP_NODShiLtJ_T0098935.1 MGP_NODShiLtJ_G0037329.1 mouse_genomes_project 16 8231271 8231434 - Gm24145 snRNA snRNA MGP_NODShiLtJ_T0000941.1 MGP_NODShiLtJ_G0000869.1 mouse_genomes_project 16 86546638 86547290 + TEC TEC MGP_NODShiLtJ_T0003623.1 MGP_NODShiLtJ_G0003274.1 mouse_genomes_project 16 38439903 38442308 + Maats1os antisense antisense MGP_NODShiLtJ_T0006783.1 MGP_NODShiLtJ_G0005586.1 mouse_genomes_project 16 29429107 29434344 + 1700025H01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006815.1 MGP_NODShiLtJ_G0005609.1 mouse_genomes_project 16 103085788 103086509 + 1110008E08Rik lincRNA lincRNA MGP_NODShiLtJ_T0006816.1 MGP_NODShiLtJ_G0005609.1 mouse_genomes_project 16 103085788 103086511 + 1110008E08Rik lincRNA lincRNA MGP_NODShiLtJ_T0043525.1 MGP_NODShiLtJ_G0022493.1 mouse_genomes_project 16 20220415 20229183 - MGP_NODShiLtJ_P0043525 Tmem41a protein_coding protein_coding MGP_NODShiLtJ_T0000952.1 MGP_NODShiLtJ_G0000879.1 mouse_genomes_project 16 86917805 86918760 + TEC TEC MGP_NODShiLtJ_T0044675.1 MGP_NODShiLtJ_G0022817.1 mouse_genomes_project 16 100847912 100848558 - MGP_NODShiLtJ_P0044675 Krtap27-1 protein_coding protein_coding MGP_NODShiLtJ_T0044893.1 MGP_NODShiLtJ_G0022888.1 mouse_genomes_project 16 105338328 105583287 - MGP_NODShiLtJ_P0044893 Runx1 protein_coding protein_coding MGP_NODShiLtJ_T0044894.1 MGP_NODShiLtJ_G0022888.1 mouse_genomes_project 16 105340548 105446157 - MGP_NODShiLtJ_P0044894 Runx1 protein_coding protein_coding MGP_NODShiLtJ_T0044895.1 MGP_NODShiLtJ_G0022888.1 mouse_genomes_project 16 105342297 105444954 - MGP_NODShiLtJ_P0044895 Runx1 protein_coding protein_coding MGP_NODShiLtJ_T0044896.1 MGP_NODShiLtJ_G0022888.1 mouse_genomes_project 16 105434336 105444324 - MGP_NODShiLtJ_P0044896 Runx1 protein_coding protein_coding MGP_NODShiLtJ_T0044897.1 MGP_NODShiLtJ_G0022888.1 mouse_genomes_project 16 105434369 105446154 - Runx1 protein_coding retained_intron MGP_NODShiLtJ_T0044898.1 MGP_NODShiLtJ_G0022888.1 mouse_genomes_project 16 105444420 105582916 - MGP_NODShiLtJ_P0044898 Runx1 protein_coding protein_coding MGP_NODShiLtJ_T0044899.1 MGP_NODShiLtJ_G0022888.1 mouse_genomes_project 16 105572565 105583212 - MGP_NODShiLtJ_P0044899 Runx1 protein_coding protein_coding MGP_NODShiLtJ_T0043830.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32279097 32334282 - MGP_NODShiLtJ_P0043830 Rubcn protein_coding protein_coding MGP_NODShiLtJ_T0043831.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32279100 32334255 - MGP_NODShiLtJ_P0043831 Rubcn protein_coding protein_coding MGP_NODShiLtJ_T0043832.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32279101 32282315 - Rubcn protein_coding retained_intron MGP_NODShiLtJ_T0043833.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32279114 32334055 - MGP_NODShiLtJ_P0043833 Rubcn protein_coding protein_coding MGP_NODShiLtJ_T0043834.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32279122 32334267 - MGP_NODShiLtJ_P0043834 Rubcn protein_coding protein_coding MGP_NODShiLtJ_T0043835.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32280861 32297001 - Rubcn protein_coding retained_intron MGP_NODShiLtJ_T0043836.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32285326 32287117 - Rubcn protein_coding retained_intron MGP_NODShiLtJ_T0043837.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32292924 32293970 - Rubcn protein_coding retained_intron MGP_NODShiLtJ_T0043838.1 MGP_NODShiLtJ_G0022576.1 mouse_genomes_project 16 32326244 32334254 - Rubcn protein_coding processed_transcript MGP_NODShiLtJ_T0042748.1 MGP_NODShiLtJ_G0022319.1 mouse_genomes_project 16 1797107 1808298 + MGP_NODShiLtJ_P0042748 Alg1 protein_coding protein_coding MGP_NODShiLtJ_T0042749.1 MGP_NODShiLtJ_G0022319.1 mouse_genomes_project 16 1797124 1803229 + Alg1 protein_coding retained_intron MGP_NODShiLtJ_T0042750.1 MGP_NODShiLtJ_G0022319.1 mouse_genomes_project 16 1797124 1808307 + MGP_NODShiLtJ_P0042750 Alg1 protein_coding protein_coding MGP_NODShiLtJ_T0042751.1 MGP_NODShiLtJ_G0022319.1 mouse_genomes_project 16 1798655 1804010 + Alg1 protein_coding processed_transcript MGP_NODShiLtJ_T0042752.1 MGP_NODShiLtJ_G0022319.1 mouse_genomes_project 16 1803564 1807151 + Alg1 protein_coding retained_intron MGP_NODShiLtJ_T0097771.1 MGP_NODShiLtJ_G0036183.1 mouse_genomes_project 16 36078664 36078758 - pseudogene pseudogene MGP_NODShiLtJ_T0044682.1 MGP_NODShiLtJ_G0022824.1 mouse_genomes_project 16 101046963 101054152 - MGP_NODShiLtJ_P0044682 Krtap14 protein_coding protein_coding MGP_NODShiLtJ_T0044684.1 MGP_NODShiLtJ_G0022824.1 mouse_genomes_project 16 101053619 101054475 - MGP_NODShiLtJ_P0044684 Krtap14 protein_coding protein_coding MGP_NODShiLtJ_T0044679.1 MGP_NODShiLtJ_G0022821.1 mouse_genomes_project 16 100960094 100961039 + MGP_NODShiLtJ_P0044679 2310034C09Rik protein_coding protein_coding MGP_NODShiLtJ_T0043148.1 MGP_NODShiLtJ_G0022412.1 mouse_genomes_project 16 15283911 15287066 - MGP_NODShiLtJ_P0043148 Thap7 protein_coding protein_coding MGP_NODShiLtJ_T0043149.1 MGP_NODShiLtJ_G0022412.1 mouse_genomes_project 16 15284115 15287042 - Thap7 protein_coding retained_intron MGP_NODShiLtJ_T0043150.1 MGP_NODShiLtJ_G0022412.1 mouse_genomes_project 16 15284179 15286982 - Thap7 protein_coding retained_intron MGP_NODShiLtJ_T0043151.1 MGP_NODShiLtJ_G0022412.1 mouse_genomes_project 16 15284273 15286611 - Thap7 protein_coding retained_intron MGP_NODShiLtJ_T0043152.1 MGP_NODShiLtJ_G0022412.1 mouse_genomes_project 16 15284430 15285078 - Thap7 protein_coding retained_intron MGP_NODShiLtJ_T0043153.1 MGP_NODShiLtJ_G0022412.1 mouse_genomes_project 16 15284511 15286985 - MGP_NODShiLtJ_P0043153 Thap7 protein_coding protein_coding MGP_NODShiLtJ_T0043154.1 MGP_NODShiLtJ_G0022412.1 mouse_genomes_project 16 15284932 15286586 - Thap7 protein_coding retained_intron MGP_NODShiLtJ_T0044238.1 MGP_NODShiLtJ_G0022674.1 mouse_genomes_project 16 46171534 46172311 + Ccdc80 protein_coding processed_transcript MGP_NODShiLtJ_T0044239.1 MGP_NODShiLtJ_G0022674.1 mouse_genomes_project 16 46171586 46173020 + Ccdc80 protein_coding processed_transcript MGP_NODShiLtJ_T0044240.1 MGP_NODShiLtJ_G0022674.1 mouse_genomes_project 16 46171722 46172476 + Ccdc80 protein_coding processed_transcript MGP_NODShiLtJ_T0044241.1 MGP_NODShiLtJ_G0022674.1 mouse_genomes_project 16 46171744 46210933 + MGP_NODShiLtJ_P0044241 Ccdc80 protein_coding protein_coding MGP_NODShiLtJ_T0044242.1 MGP_NODShiLtJ_G0022674.1 mouse_genomes_project 16 46171807 46173286 + Ccdc80 protein_coding processed_transcript MGP_NODShiLtJ_T0044243.1 MGP_NODShiLtJ_G0022674.1 mouse_genomes_project 16 46172168 46211192 + MGP_NODShiLtJ_P0044243 Ccdc80 protein_coding protein_coding MGP_NODShiLtJ_T0043369.1 MGP_NODShiLtJ_G0022464.1 mouse_genomes_project 16 17911715 17919022 - MGP_NODShiLtJ_P0043369 A930003A15Rik protein_coding protein_coding MGP_NODShiLtJ_T0042782.1 MGP_NODShiLtJ_G0022328.1 mouse_genomes_project 16 5473855 5487414 - MGP_NODShiLtJ_P0042782 Carhsp1 protein_coding protein_coding MGP_NODShiLtJ_T0101677.1 MGP_NODShiLtJ_G0039846.1 mouse_genomes_project 16 35953345 35954954 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0044060.1 MGP_NODShiLtJ_G0022630.1 mouse_genomes_project 16 37707416 37714700 - MGP_NODShiLtJ_P0044060 Ndufb4 protein_coding protein_coding MGP_NODShiLtJ_T0044061.1 MGP_NODShiLtJ_G0022630.1 mouse_genomes_project 16 37707847 37709606 - Ndufb4 protein_coding retained_intron MGP_NODShiLtJ_T0100203.1 MGP_NODShiLtJ_G0038597.1 mouse_genomes_project 16 21565315 21565454 + Gm24616 snoRNA snoRNA MGP_NODShiLtJ_T0013063.1 MGP_NODShiLtJ_G0011171.1 mouse_genomes_project 16 60286820 60287763 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044801.1 MGP_NODShiLtJ_G0022872.1 mouse_genomes_project 16 104222116 104246230 - MGP_NODShiLtJ_P0044801 Tmem50b protein_coding protein_coding MGP_NODShiLtJ_T0044802.1 MGP_NODShiLtJ_G0022872.1 mouse_genomes_project 16 104223371 104246094 - MGP_NODShiLtJ_P0044802 Tmem50b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044803.1 MGP_NODShiLtJ_G0022872.1 mouse_genomes_project 16 104228925 104246230 - MGP_NODShiLtJ_P0044803 Tmem50b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0098945.1 MGP_NODShiLtJ_G0037339.1 mouse_genomes_project 16 21914842 21914913 + Gm23066 snRNA snRNA MGP_NODShiLtJ_T0044364.1 MGP_NODShiLtJ_G0022710.1 mouse_genomes_project 16 59111923 59149756 - MGP_NODShiLtJ_P0044364 Cep97 protein_coding protein_coding MGP_NODShiLtJ_T0044365.1 MGP_NODShiLtJ_G0022710.1 mouse_genomes_project 16 59137847 59149758 - MGP_NODShiLtJ_P0044365 Cep97 protein_coding protein_coding MGP_NODShiLtJ_T0044366.1 MGP_NODShiLtJ_G0022710.1 mouse_genomes_project 16 59137854 59149815 - MGP_NODShiLtJ_P0044366 Cep97 protein_coding protein_coding MGP_NODShiLtJ_T0044367.1 MGP_NODShiLtJ_G0022710.1 mouse_genomes_project 16 59138042 59149794 - MGP_NODShiLtJ_P0044367 Cep97 protein_coding protein_coding MGP_NODShiLtJ_T0043523.1 MGP_NODShiLtJ_G0022491.1 mouse_genomes_project 16 20021032 20060832 - MGP_NODShiLtJ_P0043523 Ehhadh protein_coding protein_coding MGP_NODShiLtJ_T0044340.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52083598 52355870 - MGP_NODShiLtJ_P0044340 Bbx protein_coding protein_coding MGP_NODShiLtJ_T0044341.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52088319 52355820 - MGP_NODShiLtJ_P0044341 Bbx protein_coding protein_coding MGP_NODShiLtJ_T0044342.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52089155 52355869 - MGP_NODShiLtJ_P0044342 Bbx protein_coding protein_coding MGP_NODShiLtJ_T0044343.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52089680 52237774 - MGP_NODShiLtJ_P0044343 Bbx protein_coding protein_coding MGP_NODShiLtJ_T0044344.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52102998 52355854 - MGP_NODShiLtJ_P0044344 Bbx protein_coding protein_coding MGP_NODShiLtJ_T0044345.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52112088 52355869 - MGP_NODShiLtJ_P0044345 Bbx protein_coding protein_coding MGP_NODShiLtJ_T0044346.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52120220 52352630 - Bbx protein_coding processed_transcript MGP_NODShiLtJ_T0044347.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52348676 52355789 - Bbx protein_coding retained_intron MGP_NODShiLtJ_T0044348.1 MGP_NODShiLtJ_G0022703.1 mouse_genomes_project 16 52350098 52355827 - Bbx protein_coding processed_transcript MGP_NODShiLtJ_T0042854.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8128877 8194489 - MGP_NODShiLtJ_P0042854 Txndc11 protein_coding protein_coding MGP_NODShiLtJ_T0042855.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8129391 8138752 - Txndc11 protein_coding retained_intron MGP_NODShiLtJ_T0042856.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8138718 8141319 - Txndc11 protein_coding processed_transcript MGP_NODShiLtJ_T0042857.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8139485 8194450 - MGP_NODShiLtJ_P0042857 Txndc11 protein_coding protein_coding MGP_NODShiLtJ_T0042858.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8141201 8194412 - MGP_NODShiLtJ_P0042858 Txndc11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042859.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8142238 8179299 - Txndc11 protein_coding processed_transcript MGP_NODShiLtJ_T0042860.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8158633 8194392 - MGP_NODShiLtJ_P0042860 Txndc11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042861.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8159979 8194489 - MGP_NODShiLtJ_P0042861 Txndc11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042862.1 MGP_NODShiLtJ_G0022351.1 mouse_genomes_project 16 8170636 8194452 - MGP_NODShiLtJ_P0042862 Txndc11 protein_coding protein_coding MGP_NODShiLtJ_T0044463.1 MGP_NODShiLtJ_G0022738.1 mouse_genomes_project 16 62385076 62388088 - MGP_NODShiLtJ_P0044463 Olfr175-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0006795.1 MGP_NODShiLtJ_G0005597.1 mouse_genomes_project 16 52454335 52490807 + G730013B05Rik lincRNA lincRNA MGP_NODShiLtJ_T0010030.1 MGP_NODShiLtJ_G0008163.1 mouse_genomes_project 16 17918923 17919025 - Gm27883 miRNA miRNA MGP_NODShiLtJ_T0043263.1 MGP_NODShiLtJ_G0022438.1 mouse_genomes_project 16 16068911 16110224 - MGP_NODShiLtJ_P0043263 Dgcr8 protein_coding protein_coding MGP_NODShiLtJ_T0043264.1 MGP_NODShiLtJ_G0022438.1 mouse_genomes_project 16 16068920 16110227 - MGP_NODShiLtJ_P0043264 Dgcr8 protein_coding protein_coding MGP_NODShiLtJ_T0043265.1 MGP_NODShiLtJ_G0022438.1 mouse_genomes_project 16 16069904 16085385 - Dgcr8 protein_coding processed_transcript MGP_NODShiLtJ_T0043266.1 MGP_NODShiLtJ_G0022438.1 mouse_genomes_project 16 16092593 16105545 - Dgcr8 protein_coding retained_intron MGP_NODShiLtJ_T0043267.1 MGP_NODShiLtJ_G0022438.1 mouse_genomes_project 16 16092776 16101228 - Dgcr8 protein_coding retained_intron MGP_NODShiLtJ_T0043268.1 MGP_NODShiLtJ_G0022438.1 mouse_genomes_project 16 16108560 16110148 - Dgcr8 protein_coding processed_transcript MGP_NODShiLtJ_T0044412.1 MGP_NODShiLtJ_G0022719.1 mouse_genomes_project 16 60076494 60156708 - MGP_NODShiLtJ_P0044412 Adgrg7 protein_coding protein_coding MGP_NODShiLtJ_T0044999.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108311258 108488415 - MGP_NODShiLtJ_P0044999 Erg protein_coding protein_coding MGP_NODShiLtJ_T0045000.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108311262 108417788 - MGP_NODShiLtJ_P0045000 Erg protein_coding protein_coding MGP_NODShiLtJ_T0045001.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108312291 108488415 - MGP_NODShiLtJ_P0045001 Erg protein_coding protein_coding MGP_NODShiLtJ_T0045002.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108312291 108547776 - MGP_NODShiLtJ_P0045002 Erg protein_coding protein_coding MGP_NODShiLtJ_T0045003.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108312423 108417833 - MGP_NODShiLtJ_P0045003 Erg protein_coding protein_coding MGP_NODShiLtJ_T0045004.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108312726 108481393 - MGP_NODShiLtJ_P0045004 Erg protein_coding protein_coding MGP_NODShiLtJ_T0045005.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108312886 108417730 - MGP_NODShiLtJ_P0045005 Erg protein_coding protein_coding MGP_NODShiLtJ_T0045006.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108312886 108417730 - MGP_NODShiLtJ_P0045006 Erg protein_coding protein_coding MGP_NODShiLtJ_T0045007.1 MGP_NODShiLtJ_G0022905.1 mouse_genomes_project 16 108312886 108488373 - MGP_NODShiLtJ_P0045007 Erg protein_coding protein_coding MGP_NODShiLtJ_T0044680.1 MGP_NODShiLtJ_G0022822.1 mouse_genomes_project 16 100984039 100984892 - MGP_NODShiLtJ_P0044680 2310057N15Rik protein_coding protein_coding MGP_NODShiLtJ_T0010054.1 MGP_NODShiLtJ_G0008187.1 mouse_genomes_project 16 59308312 59308416 + Gm24047 miRNA miRNA MGP_NODShiLtJ_T0097959.1 MGP_NODShiLtJ_G0036371.1 mouse_genomes_project 16 11311363 11311473 - Gm26213 rRNA rRNA MGP_NODShiLtJ_T0013047.1 MGP_NODShiLtJ_G0011155.1 mouse_genomes_project 16 44044246 44045402 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044318.1 MGP_NODShiLtJ_G0022697.1 mouse_genomes_project 16 50548410 50550301 + MGP_NODShiLtJ_P0044318 Retnlg protein_coding protein_coding MGP_NODShiLtJ_T0044123.1 MGP_NODShiLtJ_G0022650.1 mouse_genomes_project 16 38979562 39000242 - MGP_NODShiLtJ_P0044123 4930435E12Rik protein_coding protein_coding MGP_NODShiLtJ_T0044124.1 MGP_NODShiLtJ_G0022650.1 mouse_genomes_project 16 38994291 39000224 - 4930435E12Rik protein_coding retained_intron MGP_NODShiLtJ_T0010020.1 MGP_NODShiLtJ_G0008153.1 mouse_genomes_project 16 11489508 11489574 - Gm27671 miRNA miRNA MGP_NODShiLtJ_T0042824.1 MGP_NODShiLtJ_G0022339.1 mouse_genomes_project 16 7498511 7549635 + MGP_NODShiLtJ_P0042824 Ciita protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042825.1 MGP_NODShiLtJ_G0022339.1 mouse_genomes_project 16 7505199 7551957 + MGP_NODShiLtJ_P0042825 Ciita protein_coding protein_coding MGP_NODShiLtJ_T0043979.1 MGP_NODShiLtJ_G0022615.1 mouse_genomes_project 16 36275480 36281023 - MGP_NODShiLtJ_P0043979 Stfa3 protein_coding protein_coding MGP_NODShiLtJ_T0045017.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 108989618 109096744 - MGP_NODShiLtJ_P0045017 Brwd1 protein_coding protein_coding MGP_NODShiLtJ_T0045018.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 108989975 109096763 - MGP_NODShiLtJ_P0045018 Brwd1 protein_coding protein_coding MGP_NODShiLtJ_T0045019.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 108999737 109079882 - MGP_NODShiLtJ_P0045019 Brwd1 protein_coding protein_coding MGP_NODShiLtJ_T0045020.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 108999983 109096763 - MGP_NODShiLtJ_P0045020 Brwd1 protein_coding protein_coding MGP_NODShiLtJ_T0045021.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109002306 109018922 - Brwd1 protein_coding retained_intron MGP_NODShiLtJ_T0045022.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109015203 109036701 - MGP_NODShiLtJ_P0045022 Brwd1 protein_coding protein_coding MGP_NODShiLtJ_T0045023.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109023899 109025597 - Brwd1 protein_coding retained_intron MGP_NODShiLtJ_T0045024.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109027209 109027662 - Brwd1 protein_coding retained_intron MGP_NODShiLtJ_T0045025.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109042330 109044916 - Brwd1 protein_coding retained_intron MGP_NODShiLtJ_T0045026.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109045158 109074369 - MGP_NODShiLtJ_P0045026 Brwd1 protein_coding protein_coding MGP_NODShiLtJ_T0045027.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109045282 109074334 - MGP_NODShiLtJ_P0045027 Brwd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045028.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109059441 109060663 - Brwd1 protein_coding retained_intron MGP_NODShiLtJ_T0045029.1 MGP_NODShiLtJ_G0022908.1 mouse_genomes_project 16 109079925 109096842 - MGP_NODShiLtJ_P0045029 Brwd1 protein_coding protein_coding MGP_NODShiLtJ_T0043279.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16179211 16247912 + MGP_NODShiLtJ_P0043279 Arvcf protein_coding protein_coding MGP_NODShiLtJ_T0043280.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16179303 16247908 + MGP_NODShiLtJ_P0043280 Arvcf protein_coding protein_coding MGP_NODShiLtJ_T0043281.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16179303 16247912 + MGP_NODShiLtJ_P0043281 Arvcf protein_coding protein_coding MGP_NODShiLtJ_T0043282.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16218141 16247583 + MGP_NODShiLtJ_P0043282 Arvcf protein_coding protein_coding MGP_NODShiLtJ_T0043283.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16232540 16247912 + MGP_NODShiLtJ_P0043283 Arvcf protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043284.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16232541 16247092 + MGP_NODShiLtJ_P0043284 Arvcf protein_coding protein_coding MGP_NODShiLtJ_T0043285.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16237676 16239842 + Arvcf protein_coding processed_transcript MGP_NODShiLtJ_T0043286.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16239925 16241476 + Arvcf protein_coding retained_intron MGP_NODShiLtJ_T0043287.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16241967 16244267 + Arvcf protein_coding processed_transcript MGP_NODShiLtJ_T0043288.1 MGP_NODShiLtJ_G0022440.1 mouse_genomes_project 16 16244284 16245294 + Arvcf protein_coding retained_intron MGP_NODShiLtJ_T0044071.1 MGP_NODShiLtJ_G0022635.1 mouse_genomes_project 16 38208139 38372434 + MGP_NODShiLtJ_P0044071 Gsk3b protein_coding protein_coding MGP_NODShiLtJ_T0044072.1 MGP_NODShiLtJ_G0022635.1 mouse_genomes_project 16 38209426 38366383 + MGP_NODShiLtJ_P0044072 Gsk3b protein_coding protein_coding MGP_NODShiLtJ_T0044073.1 MGP_NODShiLtJ_G0022635.1 mouse_genomes_project 16 38263907 38314907 + Gsk3b protein_coding processed_transcript MGP_NODShiLtJ_T0044074.1 MGP_NODShiLtJ_G0022635.1 mouse_genomes_project 16 38264863 38332849 + Gsk3b protein_coding retained_intron MGP_NODShiLtJ_T0042738.1 MGP_NODShiLtJ_G0022313.1 mouse_genomes_project 16 1559140 1596042 - MGP_NODShiLtJ_P0042738 Glyr1 protein_coding protein_coding MGP_NODShiLtJ_T0042739.1 MGP_NODShiLtJ_G0022313.1 mouse_genomes_project 16 1559140 1596042 - MGP_NODShiLtJ_P0042739 Glyr1 protein_coding protein_coding MGP_NODShiLtJ_T0010010.1 MGP_NODShiLtJ_G0008143.1 mouse_genomes_project 16 368980 369068 + Gm23493 miRNA miRNA MGP_NODShiLtJ_T0013010.1 MGP_NODShiLtJ_G0011118.1 mouse_genomes_project 16 12658963 12659433 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043972.1 MGP_NODShiLtJ_G0022609.1 mouse_genomes_project 16 35994830 36003117 + MGP_NODShiLtJ_P0043972 Stfa2l1 protein_coding protein_coding MGP_NODShiLtJ_T0000945.1 MGP_NODShiLtJ_G0000872.1 mouse_genomes_project 16 86586957 86589994 + TEC TEC MGP_NODShiLtJ_T0044588.1 MGP_NODShiLtJ_G0022789.1 mouse_genomes_project 16 87682508 87726601 + MGP_NODShiLtJ_P0044588 Cxadr protein_coding protein_coding MGP_NODShiLtJ_T0044589.1 MGP_NODShiLtJ_G0022789.1 mouse_genomes_project 16 87682768 87738511 + MGP_NODShiLtJ_P0044589 Cxadr protein_coding protein_coding MGP_NODShiLtJ_T0044590.1 MGP_NODShiLtJ_G0022789.1 mouse_genomes_project 16 87682844 87722302 + MGP_NODShiLtJ_P0044590 Cxadr protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043008.1 MGP_NODShiLtJ_G0022388.1 mouse_genomes_project 16 13887960 13956435 - MGP_NODShiLtJ_P0043008 Dnm1l protein_coding protein_coding MGP_NODShiLtJ_T0043009.1 MGP_NODShiLtJ_G0022388.1 mouse_genomes_project 16 13887960 13956435 - MGP_NODShiLtJ_P0043009 Dnm1l protein_coding protein_coding MGP_NODShiLtJ_T0043010.1 MGP_NODShiLtJ_G0022388.1 mouse_genomes_project 16 13887960 13956435 - MGP_NODShiLtJ_P0043010 Dnm1l protein_coding protein_coding MGP_NODShiLtJ_T0044788.1 MGP_NODShiLtJ_G0022869.1 mouse_genomes_project 16 104031081 104052459 + MGP_NODShiLtJ_P0044788 Il10rb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044789.1 MGP_NODShiLtJ_G0022869.1 mouse_genomes_project 16 104031152 104052471 + MGP_NODShiLtJ_P0044789 Il10rb protein_coding protein_coding MGP_NODShiLtJ_T0044790.1 MGP_NODShiLtJ_G0022869.1 mouse_genomes_project 16 104031237 104046949 + Il10rb protein_coding retained_intron MGP_NODShiLtJ_T0044791.1 MGP_NODShiLtJ_G0022869.1 mouse_genomes_project 16 104031237 104051562 + MGP_NODShiLtJ_P0044791 Il10rb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044792.1 MGP_NODShiLtJ_G0022869.1 mouse_genomes_project 16 104031361 104041321 + Il10rb protein_coding processed_transcript MGP_NODShiLtJ_T0042863.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8196430 8242197 - MGP_NODShiLtJ_P0042863 Zc3h7a protein_coding protein_coding MGP_NODShiLtJ_T0042864.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8196964 8200714 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042865.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8198881 8201730 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042866.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8200537 8210414 - MGP_NODShiLtJ_P0042866 Zc3h7a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042867.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8200631 8242145 - MGP_NODShiLtJ_P0042867 Zc3h7a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042868.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8207113 8241904 - MGP_NODShiLtJ_P0042868 Zc3h7a protein_coding protein_coding MGP_NODShiLtJ_T0042869.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8207299 8209264 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042870.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8209265 8213319 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042871.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8210416 8240781 - MGP_NODShiLtJ_P0042871 Zc3h7a protein_coding protein_coding MGP_NODShiLtJ_T0042872.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8212192 8213123 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042873.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8213184 8214649 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042874.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8213577 8217942 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042875.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8214915 8222013 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042876.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8216051 8222035 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0042877.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8218393 8240748 - MGP_NODShiLtJ_P0042877 Zc3h7a protein_coding protein_coding MGP_NODShiLtJ_T0042878.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8224319 8241369 - MGP_NODShiLtJ_P0042878 Zc3h7a protein_coding protein_coding MGP_NODShiLtJ_T0042879.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8224329 8241868 - MGP_NODShiLtJ_P0042879 Zc3h7a protein_coding protein_coding MGP_NODShiLtJ_T0042880.1 MGP_NODShiLtJ_G0022352.1 mouse_genomes_project 16 8226742 8242146 - Zc3h7a protein_coding retained_intron MGP_NODShiLtJ_T0012994.1 MGP_NODShiLtJ_G0011102.1 mouse_genomes_project 16 370390 370956 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006822.1 MGP_NODShiLtJ_G0005613.1 mouse_genomes_project 16 106639935 106642674 - 2310043M15Rik lincRNA lincRNA MGP_NODShiLtJ_T0044487.1 MGP_NODShiLtJ_G0022750.1 mouse_genomes_project 16 62875080 62876244 - MGP_NODShiLtJ_P0044487 Olfr198 protein_coding protein_coding MGP_NODShiLtJ_T0043484.1 MGP_NODShiLtJ_G0022482.1 mouse_genomes_project 16 18815353 18821355 + MGP_NODShiLtJ_P0043484 Fam131a protein_coding protein_coding MGP_NODShiLtJ_T0043485.1 MGP_NODShiLtJ_G0022482.1 mouse_genomes_project 16 18815374 18825120 + MGP_NODShiLtJ_P0043485 Fam131a protein_coding protein_coding MGP_NODShiLtJ_T0043486.1 MGP_NODShiLtJ_G0022482.1 mouse_genomes_project 16 18816979 18825120 + MGP_NODShiLtJ_P0043486 Fam131a protein_coding protein_coding MGP_NODShiLtJ_T0043487.1 MGP_NODShiLtJ_G0022482.1 mouse_genomes_project 16 18818246 18823731 + MGP_NODShiLtJ_P0043487 Fam131a protein_coding protein_coding MGP_NODShiLtJ_T0006765.1 MGP_NODShiLtJ_G0005571.1 mouse_genomes_project 16 8273200 8296958 + 2610020C07Rik lincRNA lincRNA MGP_NODShiLtJ_T0013032.1 MGP_NODShiLtJ_G0011140.1 mouse_genomes_project 16 24400167 24401088 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043325.1 MGP_NODShiLtJ_G0022448.1 mouse_genomes_project 16 16663676 16665090 + MGP_NODShiLtJ_P0043325 Cldn5 protein_coding protein_coding MGP_NODShiLtJ_T0000039.1 MGP_NODShiLtJ_G0000032.1 mouse_genomes_project 16 16976106 16976144 - MGP_NODShiLtJ_P0000039 Iglj3 IG_J_gene IG_J_gene MGP_NODShiLtJ_T0003627.1 MGP_NODShiLtJ_G0003278.1 mouse_genomes_project 16 46869854 46870475 + Gm15591 antisense antisense MGP_NODShiLtJ_T0043528.1 MGP_NODShiLtJ_G0022495.1 mouse_genomes_project 16 20302447 20343481 + MGP_NODShiLtJ_P0043528 Senp2 protein_coding protein_coding MGP_NODShiLtJ_T0042689.1 MGP_NODShiLtJ_G0022301.1 mouse_genomes_project 16 1230501 1240740 - MGP_NODShiLtJ_P0042689 Nmral1 protein_coding protein_coding MGP_NODShiLtJ_T0042690.1 MGP_NODShiLtJ_G0022301.1 mouse_genomes_project 16 1232952 1240987 - MGP_NODShiLtJ_P0042690 Nmral1 protein_coding protein_coding MGP_NODShiLtJ_T0042691.1 MGP_NODShiLtJ_G0022301.1 mouse_genomes_project 16 1232952 1240787 - MGP_NODShiLtJ_P0042691 Nmral1 protein_coding protein_coding MGP_NODShiLtJ_T0042692.1 MGP_NODShiLtJ_G0022301.1 mouse_genomes_project 16 1233930 1240743 - MGP_NODShiLtJ_P0042692 Nmral1 protein_coding protein_coding MGP_NODShiLtJ_T0042693.1 MGP_NODShiLtJ_G0022301.1 mouse_genomes_project 16 1236140 1240719 - Nmral1 protein_coding retained_intron MGP_NODShiLtJ_T0042694.1 MGP_NODShiLtJ_G0022301.1 mouse_genomes_project 16 1237456 1240735 - Nmral1 protein_coding retained_intron MGP_NODShiLtJ_T0010071.1 MGP_NODShiLtJ_G0008204.1 mouse_genomes_project 16 107046506 107046616 - Gm23062 miRNA miRNA MGP_NODShiLtJ_T0017345.1 MGP_NODShiLtJ_G0015180.1 mouse_genomes_project 16 1817726 1870035 + Gm15983 processed_transcript processed_transcript MGP_NODShiLtJ_T0043322.1 MGP_NODShiLtJ_G0022446.1 mouse_genomes_project 16 16484346 16486431 - MGP_NODShiLtJ_P0043322 Gp1bb protein_coding protein_coding MGP_NODShiLtJ_T0043323.1 MGP_NODShiLtJ_G0022446.1 mouse_genomes_project 16 16484749 16485394 - MGP_NODShiLtJ_P0043323 Gp1bb protein_coding protein_coding MGP_NODShiLtJ_T0017361.1 MGP_NODShiLtJ_G0015190.1 mouse_genomes_project 16 61913733 61917132 - 4930461C15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0042917.1 MGP_NODShiLtJ_G0022363.1 mouse_genomes_project 16 10963757 10994885 + MGP_NODShiLtJ_P0042917 Bfar protein_coding protein_coding MGP_NODShiLtJ_T0042918.1 MGP_NODShiLtJ_G0022363.1 mouse_genomes_project 16 10963774 10994875 + MGP_NODShiLtJ_P0042918 Bfar protein_coding protein_coding MGP_NODShiLtJ_T0042920.1 MGP_NODShiLtJ_G0022363.1 mouse_genomes_project 16 10963849 10990562 + MGP_NODShiLtJ_P0042920 Bfar protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042921.1 MGP_NODShiLtJ_G0022363.1 mouse_genomes_project 16 10963961 10977523 + Bfar protein_coding retained_intron MGP_NODShiLtJ_T0042922.1 MGP_NODShiLtJ_G0022363.1 mouse_genomes_project 16 10976793 10979448 + Bfar protein_coding retained_intron MGP_NODShiLtJ_T0042923.1 MGP_NODShiLtJ_G0022363.1 mouse_genomes_project 16 10977137 10979879 + Bfar protein_coding retained_intron MGP_NODShiLtJ_T0042924.1 MGP_NODShiLtJ_G0022363.1 mouse_genomes_project 16 10983871 10988779 + Bfar protein_coding retained_intron MGP_NODShiLtJ_T0043974.1 MGP_NODShiLtJ_G0022611.1 mouse_genomes_project 16 36012136 36016010 + MGP_NODShiLtJ_P0043974 Gm5483 protein_coding protein_coding MGP_NODShiLtJ_T0100199.1 MGP_NODShiLtJ_G0038593.1 mouse_genomes_project 16 21562650 21562719 + Snord2 snoRNA snoRNA MGP_NODShiLtJ_T0044475.1 MGP_NODShiLtJ_G0022743.1 mouse_genomes_project 16 62573104 62578336 + MGP_NODShiLtJ_P0044475 Olfr183 protein_coding protein_coding MGP_NODShiLtJ_T0044476.1 MGP_NODShiLtJ_G0022743.1 mouse_genomes_project 16 62573123 62577872 + MGP_NODShiLtJ_P0044476 Olfr183 protein_coding protein_coding MGP_NODShiLtJ_T0013034.1 MGP_NODShiLtJ_G0011142.1 mouse_genomes_project 16 28460590 28460984 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044530.1 MGP_NODShiLtJ_G0022769.1 mouse_genomes_project 16 70206870 70299538 - MGP_NODShiLtJ_P0044530 protein_coding protein_coding MGP_NODShiLtJ_T0043422.1 MGP_NODShiLtJ_G0022475.1 mouse_genomes_project 16 18666430 18680400 + MGP_NODShiLtJ_P0043422 Abcf3 protein_coding protein_coding MGP_NODShiLtJ_T0043423.1 MGP_NODShiLtJ_G0022475.1 mouse_genomes_project 16 18667521 18670634 + Abcf3 protein_coding retained_intron MGP_NODShiLtJ_T0043424.1 MGP_NODShiLtJ_G0022475.1 mouse_genomes_project 16 18668430 18677838 + Abcf3 protein_coding retained_intron MGP_NODShiLtJ_T0043425.1 MGP_NODShiLtJ_G0022475.1 mouse_genomes_project 16 18678308 18679291 + Abcf3 protein_coding retained_intron MGP_NODShiLtJ_T0043426.1 MGP_NODShiLtJ_G0022475.1 mouse_genomes_project 16 18678621 18679839 + Abcf3 protein_coding retained_intron MGP_NODShiLtJ_T0100201.1 MGP_NODShiLtJ_G0038595.1 mouse_genomes_project 16 21564454 21564632 + Snora81 snoRNA snoRNA MGP_NODShiLtJ_T0003640.1 MGP_NODShiLtJ_G0003288.1 mouse_genomes_project 16 105349720 105356913 + Gm26626 antisense antisense MGP_NODShiLtJ_T0044174.1 MGP_NODShiLtJ_G0022660.1 mouse_genomes_project 16 44933069 44968766 - MGP_NODShiLtJ_P0044174 Gramd1c protein_coding protein_coding MGP_NODShiLtJ_T0044175.1 MGP_NODShiLtJ_G0022660.1 mouse_genomes_project 16 44933074 44983680 - MGP_NODShiLtJ_P0044175 Gramd1c protein_coding protein_coding MGP_NODShiLtJ_T0044176.1 MGP_NODShiLtJ_G0022660.1 mouse_genomes_project 16 44933074 44972163 - MGP_NODShiLtJ_P0044176 Gramd1c protein_coding protein_coding MGP_NODShiLtJ_T0044177.1 MGP_NODShiLtJ_G0022660.1 mouse_genomes_project 16 44940587 44996243 - MGP_NODShiLtJ_P0044177 Gramd1c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043743.1 MGP_NODShiLtJ_G0022554.1 mouse_genomes_project 16 31322731 31333953 + MGP_NODShiLtJ_P0043743 Ncbp2 protein_coding protein_coding MGP_NODShiLtJ_T0043744.1 MGP_NODShiLtJ_G0022554.1 mouse_genomes_project 16 31322819 31332629 + Ncbp2 protein_coding retained_intron MGP_NODShiLtJ_T0043745.1 MGP_NODShiLtJ_G0022554.1 mouse_genomes_project 16 31322824 31337262 + Ncbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0043746.1 MGP_NODShiLtJ_G0022554.1 mouse_genomes_project 16 31322831 31332657 + MGP_NODShiLtJ_P0043746 Ncbp2 protein_coding protein_coding MGP_NODShiLtJ_T0044359.1 MGP_NODShiLtJ_G0022707.1 mouse_genomes_project 16 58328611 58400038 - MGP_NODShiLtJ_P0044359 Zpld1 protein_coding protein_coding MGP_NODShiLtJ_T0044360.1 MGP_NODShiLtJ_G0022707.1 mouse_genomes_project 16 58328611 58417091 - MGP_NODShiLtJ_P0044360 Zpld1 protein_coding protein_coding MGP_NODShiLtJ_T0010064.1 MGP_NODShiLtJ_G0008197.1 mouse_genomes_project 16 87398626 87399791 + miRNA miRNA MGP_NODShiLtJ_T0044845.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388380 104533283 + MGP_NODShiLtJ_P0044845 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044846.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388452 104534724 + MGP_NODShiLtJ_P0044846 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044847.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388452 104581638 + MGP_NODShiLtJ_P0044847 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044848.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388452 104588220 + MGP_NODShiLtJ_P0044848 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044849.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388469 104495381 + MGP_NODShiLtJ_P0044849 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044850.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388470 104534728 + MGP_NODShiLtJ_P0044850 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044851.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388472 104534726 + MGP_NODShiLtJ_P0044851 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044852.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388565 104442742 + Itsn1 protein_coding retained_intron MGP_NODShiLtJ_T0044853.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388670 104454212 + Itsn1 protein_coding retained_intron MGP_NODShiLtJ_T0044854.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104388691 104533570 + MGP_NODShiLtJ_P0044854 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044855.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104442524 104481937 + MGP_NODShiLtJ_P0044855 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044856.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104444468 104491338 + Itsn1 protein_coding processed_transcript MGP_NODShiLtJ_T0044857.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104466822 104479118 + Itsn1 protein_coding processed_transcript MGP_NODShiLtJ_T0044858.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104466836 104474492 + Itsn1 protein_coding retained_intron MGP_NODShiLtJ_T0044859.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104479026 104490925 + Itsn1 protein_coding processed_transcript MGP_NODShiLtJ_T0044860.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104490564 104491301 + Itsn1 protein_coding retained_intron MGP_NODShiLtJ_T0044861.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104502749 104514367 + Itsn1 protein_coding retained_intron MGP_NODShiLtJ_T0044862.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104502838 104516311 + MGP_NODShiLtJ_P0044862 Itsn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044863.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104505678 104516311 + MGP_NODShiLtJ_P0044863 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044864.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104516861 104526387 + MGP_NODShiLtJ_P0044864 Itsn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044865.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104525076 104534420 + Itsn1 protein_coding retained_intron MGP_NODShiLtJ_T0044866.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104542953 104560365 + Itsn1 protein_coding processed_transcript MGP_NODShiLtJ_T0044867.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104553755 104576931 + MGP_NODShiLtJ_P0044867 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044868.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104565923 104576954 + MGP_NODShiLtJ_P0044868 Itsn1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044869.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104565925 104576931 + MGP_NODShiLtJ_P0044869 Itsn1 protein_coding protein_coding MGP_NODShiLtJ_T0044870.1 MGP_NODShiLtJ_G0022879.1 mouse_genomes_project 16 104579608 104582810 + Itsn1 protein_coding processed_transcript MGP_NODShiLtJ_T0003637.1 MGP_NODShiLtJ_G0003285.1 mouse_genomes_project 16 103564116 103569823 + antisense antisense MGP_NODShiLtJ_T0013027.1 MGP_NODShiLtJ_G0011135.1 mouse_genomes_project 16 20347518 20347942 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043210.1 MGP_NODShiLtJ_G0022420.1 mouse_genomes_project 16 15574375 15586993 + MGP_NODShiLtJ_P0043210 Scarf2 protein_coding protein_coding MGP_NODShiLtJ_T0043447.1 MGP_NODShiLtJ_G0022479.1 mouse_genomes_project 16 18737173 18739246 - MGP_NODShiLtJ_P0043447 Camk2n2 protein_coding protein_coding MGP_NODShiLtJ_T0013036.1 MGP_NODShiLtJ_G0011144.1 mouse_genomes_project 16 31345815 31346260 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097770.1 MGP_NODShiLtJ_G0036182.1 mouse_genomes_project 16 31322242 31322667 - pseudogene pseudogene MGP_NODShiLtJ_T0043777.1 MGP_NODShiLtJ_G0022561.1 mouse_genomes_project 16 31622247 31642444 - MGP_NODShiLtJ_P0043777 Fbxo45 protein_coding protein_coding MGP_NODShiLtJ_T0003617.1 MGP_NODShiLtJ_G0003270.1 mouse_genomes_project 16 34633474 34636950 - 1700119H24Rik antisense antisense MGP_NODShiLtJ_T0101676.1 MGP_NODShiLtJ_G0039845.1 mouse_genomes_project 16 21413253 21423063 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0042846.1 MGP_NODShiLtJ_G0022347.1 mouse_genomes_project 16 7848612 7848692 + MGP_NODShiLtJ_P0042846 Gm11172 protein_coding protein_coding MGP_NODShiLtJ_T0044900.1 MGP_NODShiLtJ_G0022889.1 mouse_genomes_project 16 106408685 106432866 - Setd4 protein_coding retained_intron MGP_NODShiLtJ_T0044901.1 MGP_NODShiLtJ_G0022889.1 mouse_genomes_project 16 106408685 106432878 - MGP_NODShiLtJ_P0044901 Setd4 protein_coding protein_coding MGP_NODShiLtJ_T0044902.1 MGP_NODShiLtJ_G0022889.1 mouse_genomes_project 16 106408686 106414836 - Setd4 protein_coding processed_transcript MGP_NODShiLtJ_T0044903.1 MGP_NODShiLtJ_G0022889.1 mouse_genomes_project 16 106408688 106416688 - Setd4 protein_coding retained_intron MGP_NODShiLtJ_T0044904.1 MGP_NODShiLtJ_G0022889.1 mouse_genomes_project 16 106408688 106432890 - MGP_NODShiLtJ_P0044904 Setd4 protein_coding protein_coding MGP_NODShiLtJ_T0044905.1 MGP_NODShiLtJ_G0022889.1 mouse_genomes_project 16 106418562 106426536 - Setd4 protein_coding processed_transcript MGP_NODShiLtJ_T0044906.1 MGP_NODShiLtJ_G0022889.1 mouse_genomes_project 16 106418694 106433139 - Setd4 protein_coding processed_transcript MGP_NODShiLtJ_T0044907.1 MGP_NODShiLtJ_G0022889.1 mouse_genomes_project 16 106430747 106432890 - Setd4 protein_coding processed_transcript MGP_NODShiLtJ_T0003589.1 MGP_NODShiLtJ_G0003247.1 mouse_genomes_project 16 370573 372096 - Gm15537 antisense antisense MGP_NODShiLtJ_T0043603.1 MGP_NODShiLtJ_G0022514.1 mouse_genomes_project 16 22105225 22110757 + MGP_NODShiLtJ_P0043603 Rtp4 protein_coding protein_coding MGP_NODShiLtJ_T0043786.1 MGP_NODShiLtJ_G0022565.1 mouse_genomes_project 16 31737489 31808518 + MGP_NODShiLtJ_P0043786 Ubxn7 protein_coding protein_coding MGP_NODShiLtJ_T0043738.1 MGP_NODShiLtJ_G0022552.1 mouse_genomes_project 16 31306998 31320265 + MGP_NODShiLtJ_P0043738 Pigz protein_coding protein_coding MGP_NODShiLtJ_T0043739.1 MGP_NODShiLtJ_G0022552.1 mouse_genomes_project 16 31307090 31318567 + Pigz protein_coding processed_transcript MGP_NODShiLtJ_T0043740.1 MGP_NODShiLtJ_G0022552.1 mouse_genomes_project 16 31307129 31316840 + Pigz protein_coding processed_transcript MGP_NODShiLtJ_T0043741.1 MGP_NODShiLtJ_G0022552.1 mouse_genomes_project 16 31316217 31316836 + Pigz protein_coding processed_transcript MGP_NODShiLtJ_T0043324.1 MGP_NODShiLtJ_G0022447.1 mouse_genomes_project 16 16485838 16493952 - MGP_NODShiLtJ_P0043324 Sept5 protein_coding protein_coding MGP_NODShiLtJ_T0042598.1 MGP_NODShiLtJ_G0022285.1 mouse_genomes_project 16 324904 361351 + MGP_NODShiLtJ_P0042598 Gm20695 protein_coding protein_coding MGP_NODShiLtJ_T0042608.1 MGP_NODShiLtJ_G0022285.1 mouse_genomes_project 16 339191 361320 + Gm20695 protein_coding processed_transcript MGP_NODShiLtJ_T0101069.1 MGP_NODShiLtJ_G0039429.1 mouse_genomes_project 16 705685 707663 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101070.1 MGP_NODShiLtJ_G0039429.1 mouse_genomes_project 16 706757 707556 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0042889.1 MGP_NODShiLtJ_G0022355.1 mouse_genomes_project 16 8405455 8411664 + MGP_NODShiLtJ_P0042889 Tnfrsf17 protein_coding protein_coding MGP_NODShiLtJ_T0044704.1 MGP_NODShiLtJ_G0022842.1 mouse_genomes_project 16 101451804 101452269 + MGP_NODShiLtJ_P0044704 Gm10061 protein_coding protein_coding MGP_NODShiLtJ_T0100233.1 MGP_NODShiLtJ_G0038627.1 mouse_genomes_project 16 87810045 87810175 - Gm25038 snoRNA snoRNA MGP_NODShiLtJ_T0000944.1 MGP_NODShiLtJ_G0000871.1 mouse_genomes_project 16 86581979 86583253 + TEC TEC MGP_NODShiLtJ_T0043611.1 MGP_NODShiLtJ_G0022519.1 mouse_genomes_project 16 23913902 24060797 + MGP_NODShiLtJ_P0043611 Tprg protein_coding protein_coding MGP_NODShiLtJ_T0043612.1 MGP_NODShiLtJ_G0022519.1 mouse_genomes_project 16 23913906 23949466 + Tprg protein_coding retained_intron MGP_NODShiLtJ_T0043362.1 MGP_NODShiLtJ_G0022463.1 mouse_genomes_project 16 17790828 17802817 + MGP_NODShiLtJ_P0043362 B3gnt5 protein_coding protein_coding MGP_NODShiLtJ_T0043363.1 MGP_NODShiLtJ_G0022463.1 mouse_genomes_project 16 17790854 17803337 + MGP_NODShiLtJ_P0043363 B3gnt5 protein_coding protein_coding MGP_NODShiLtJ_T0043364.1 MGP_NODShiLtJ_G0022463.1 mouse_genomes_project 16 17790854 17803047 + MGP_NODShiLtJ_P0043364 B3gnt5 protein_coding protein_coding MGP_NODShiLtJ_T0043365.1 MGP_NODShiLtJ_G0022463.1 mouse_genomes_project 16 17791019 17796206 + B3gnt5 protein_coding processed_transcript MGP_NODShiLtJ_T0043366.1 MGP_NODShiLtJ_G0022463.1 mouse_genomes_project 16 17791206 17799422 + B3gnt5 protein_coding retained_intron MGP_NODShiLtJ_T0043367.1 MGP_NODShiLtJ_G0022463.1 mouse_genomes_project 16 17791207 17794907 + B3gnt5 protein_coding retained_intron MGP_NODShiLtJ_T0043368.1 MGP_NODShiLtJ_G0022463.1 mouse_genomes_project 16 17791674 17801208 + MGP_NODShiLtJ_P0043368 B3gnt5 protein_coding protein_coding MGP_NODShiLtJ_T0043462.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18790204 18801258 + MGP_NODShiLtJ_P0043462 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043463.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18790206 18800788 + MGP_NODShiLtJ_P0043463 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043464.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794585 18814956 + MGP_NODShiLtJ_P0043464 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043465.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794608 18814955 + MGP_NODShiLtJ_P0043465 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043466.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794611 18814953 + MGP_NODShiLtJ_P0043466 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043467.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794611 18805699 + MGP_NODShiLtJ_P0043467 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043468.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794617 18814955 + MGP_NODShiLtJ_P0043468 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043469.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794632 18805705 + MGP_NODShiLtJ_P0043469 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043470.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794633 18805705 + MGP_NODShiLtJ_P0043470 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043471.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794685 18801134 + MGP_NODShiLtJ_P0043471 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043472.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18794685 18814956 + MGP_NODShiLtJ_P0043472 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043473.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18795157 18814956 + MGP_NODShiLtJ_P0043473 Eif4g1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043474.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18795260 18799661 + MGP_NODShiLtJ_P0043474 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043475.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18795282 18814955 + MGP_NODShiLtJ_P0043475 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043476.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18795301 18800526 + MGP_NODShiLtJ_P0043476 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043477.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18795379 18814953 + MGP_NODShiLtJ_P0043477 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043478.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18795676 18800522 + MGP_NODShiLtJ_P0043478 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043479.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18795973 18800537 + MGP_NODShiLtJ_P0043479 Eif4g1 protein_coding protein_coding MGP_NODShiLtJ_T0043480.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18800138 18814953 + Eif4g1 protein_coding retained_intron MGP_NODShiLtJ_T0043481.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18800268 18801448 + Eif4g1 protein_coding processed_transcript MGP_NODShiLtJ_T0043482.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18802901 18803596 + Eif4g1 protein_coding retained_intron MGP_NODShiLtJ_T0043483.1 MGP_NODShiLtJ_G0022481.1 mouse_genomes_project 16 18811057 18811744 + Eif4g1 protein_coding retained_intron MGP_NODShiLtJ_T0043084.1 MGP_NODShiLtJ_G0022400.1 mouse_genomes_project 16 14848918 14853941 - MGP_NODShiLtJ_P0043084 Ccdc116 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043085.1 MGP_NODShiLtJ_G0022400.1 mouse_genomes_project 16 14848922 14857088 - MGP_NODShiLtJ_P0043085 Ccdc116 protein_coding protein_coding MGP_NODShiLtJ_T0043086.1 MGP_NODShiLtJ_G0022400.1 mouse_genomes_project 16 14850894 14854068 - MGP_NODShiLtJ_P0043086 Ccdc116 protein_coding protein_coding MGP_NODShiLtJ_T0043087.1 MGP_NODShiLtJ_G0022400.1 mouse_genomes_project 16 14850895 14854282 - MGP_NODShiLtJ_P0043087 Ccdc116 protein_coding protein_coding MGP_NODShiLtJ_T0043088.1 MGP_NODShiLtJ_G0022400.1 mouse_genomes_project 16 14852579 14854297 - Ccdc116 protein_coding processed_transcript MGP_NODShiLtJ_T0042929.1 MGP_NODShiLtJ_G0022366.1 mouse_genomes_project 16 11092533 11132428 + MGP_NODShiLtJ_P0042929 Rrn3 protein_coding protein_coding MGP_NODShiLtJ_T0101071.1 MGP_NODShiLtJ_G0039430.1 mouse_genomes_project 16 37985587 37986677 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0042581.1 MGP_NODShiLtJ_G0022278.1 mouse_genomes_project 16 11917 13482 + MGP_NODShiLtJ_P0042581 Olfr161 protein_coding protein_coding MGP_NODShiLtJ_T0013038.1 MGP_NODShiLtJ_G0011146.1 mouse_genomes_project 16 32009730 32010339 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100208.1 MGP_NODShiLtJ_G0038602.1 mouse_genomes_project 16 31638429 31638573 - Gm25848 snoRNA snoRNA MGP_NODShiLtJ_T0010061.1 MGP_NODShiLtJ_G0008194.1 mouse_genomes_project 16 86854396 86854461 + Mir99a miRNA miRNA MGP_NODShiLtJ_T0043370.1 MGP_NODShiLtJ_G0022465.1 mouse_genomes_project 16 17985360 18024694 - MGP_NODShiLtJ_P0043370 Klhl6 protein_coding protein_coding MGP_NODShiLtJ_T0043371.1 MGP_NODShiLtJ_G0022465.1 mouse_genomes_project 16 17997788 18008116 - Klhl6 protein_coding retained_intron MGP_NODShiLtJ_T0043372.1 MGP_NODShiLtJ_G0022465.1 mouse_genomes_project 16 17997808 18024664 - MGP_NODShiLtJ_P0043372 Klhl6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043373.1 MGP_NODShiLtJ_G0022465.1 mouse_genomes_project 16 18007840 18024587 - MGP_NODShiLtJ_P0043373 Klhl6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044300.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47562399 47697732 - MGP_NODShiLtJ_P0044300 Nectin3 protein_coding protein_coding MGP_NODShiLtJ_T0044301.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47569551 47587042 - MGP_NODShiLtJ_P0044301 Nectin3 protein_coding protein_coding MGP_NODShiLtJ_T0044302.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47569598 47587098 - MGP_NODShiLtJ_P0044302 Nectin3 protein_coding protein_coding MGP_NODShiLtJ_T0044303.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47569682 47627738 - MGP_NODShiLtJ_P0044303 Nectin3 protein_coding protein_coding MGP_NODShiLtJ_T0044304.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47570136 47614952 - MGP_NODShiLtJ_P0044304 Nectin3 protein_coding protein_coding MGP_NODShiLtJ_T0044305.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47612875 47697618 - MGP_NODShiLtJ_P0044305 Nectin3 protein_coding protein_coding MGP_NODShiLtJ_T0044306.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47613287 47615530 - Nectin3 protein_coding retained_intron MGP_NODShiLtJ_T0044307.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47626396 47697732 - MGP_NODShiLtJ_P0044307 Nectin3 protein_coding protein_coding MGP_NODShiLtJ_T0044308.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47646084 47697538 - MGP_NODShiLtJ_P0044308 Nectin3 protein_coding protein_coding MGP_NODShiLtJ_T0044309.1 MGP_NODShiLtJ_G0022689.1 mouse_genomes_project 16 47650274 47699290 - Nectin3 protein_coding processed_transcript MGP_NODShiLtJ_T0044740.1 MGP_NODShiLtJ_G0022858.1 mouse_genomes_project 16 103303511 103365242 - MGP_NODShiLtJ_P0044740 Urb1 protein_coding protein_coding MGP_NODShiLtJ_T0044741.1 MGP_NODShiLtJ_G0022858.1 mouse_genomes_project 16 103320182 103325954 - Urb1 protein_coding retained_intron MGP_NODShiLtJ_T0044742.1 MGP_NODShiLtJ_G0022858.1 mouse_genomes_project 16 103336305 103365242 - Urb1 protein_coding retained_intron MGP_NODShiLtJ_T0044743.1 MGP_NODShiLtJ_G0022858.1 mouse_genomes_project 16 103353901 103365231 - Urb1 protein_coding retained_intron MGP_NODShiLtJ_T0044744.1 MGP_NODShiLtJ_G0022858.1 mouse_genomes_project 16 103358688 103365263 - Urb1 protein_coding retained_intron MGP_NODShiLtJ_T0017362.1 MGP_NODShiLtJ_G0015191.1 mouse_genomes_project 16 63298370 63340844 - Crybg3 processed_transcript processed_transcript MGP_NODShiLtJ_T0044479.1 MGP_NODShiLtJ_G0022745.1 mouse_genomes_project 16 62619420 62623390 - MGP_NODShiLtJ_P0044479 Olfr187 protein_coding protein_coding MGP_NODShiLtJ_T0044480.1 MGP_NODShiLtJ_G0022745.1 mouse_genomes_project 16 62619420 62620398 - MGP_NODShiLtJ_P0044480 Olfr187 protein_coding protein_coding MGP_NODShiLtJ_T0044481.1 MGP_NODShiLtJ_G0022745.1 mouse_genomes_project 16 62619945 62623408 - MGP_NODShiLtJ_P0044481 Olfr187 protein_coding protein_coding MGP_NODShiLtJ_T0043442.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18729544 18736966 + MGP_NODShiLtJ_P0043442 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0043443.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18729552 18736828 + MGP_NODShiLtJ_P0043443 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0043444.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18729552 18767529 + MGP_NODShiLtJ_P0043444 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0043445.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18729561 18767534 + MGP_NODShiLtJ_P0043445 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0043446.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18729745 18767529 + MGP_NODShiLtJ_P0043446 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0043448.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18748817 18767529 + MGP_NODShiLtJ_P0043448 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0043449.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18748834 18764648 + Ece2 protein_coding retained_intron MGP_NODShiLtJ_T0043450.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18748834 18768090 + MGP_NODShiLtJ_P0043450 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0043451.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18748840 18767529 + MGP_NODShiLtJ_P0043451 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0043452.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18750134 18758685 + Ece2 protein_coding retained_intron MGP_NODShiLtJ_T0043453.1 MGP_NODShiLtJ_G0022478.1 mouse_genomes_project 16 18751859 18768099 + MGP_NODShiLtJ_P0043453 Ece2 protein_coding protein_coding MGP_NODShiLtJ_T0044729.1 MGP_NODShiLtJ_G0022853.1 mouse_genomes_project 16 102717135 102722716 + MGP_NODShiLtJ_P0044729 Sod1 protein_coding protein_coding MGP_NODShiLtJ_T0013005.1 MGP_NODShiLtJ_G0011113.1 mouse_genomes_project 16 8596289 8597775 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042653.1 MGP_NODShiLtJ_G0022293.1 mouse_genomes_project 16 765040 794736 - MGP_NODShiLtJ_P0042653 Adcy9 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0042654.1 MGP_NODShiLtJ_G0022293.1 mouse_genomes_project 16 767682 904516 - MGP_NODShiLtJ_P0042654 Adcy9 protein_coding protein_coding MGP_NODShiLtJ_T0042655.1 MGP_NODShiLtJ_G0022293.1 mouse_genomes_project 16 767682 903826 - MGP_NODShiLtJ_P0042655 Adcy9 protein_coding protein_coding MGP_NODShiLtJ_T0042656.1 MGP_NODShiLtJ_G0022293.1 mouse_genomes_project 16 767691 903605 - MGP_NODShiLtJ_P0042656 Adcy9 protein_coding protein_coding MGP_NODShiLtJ_T0043646.1 MGP_NODShiLtJ_G0022532.1 mouse_genomes_project 16 28387191 28407921 + MGP_NODShiLtJ_P0043646 Hrasls protein_coding protein_coding MGP_NODShiLtJ_T0043647.1 MGP_NODShiLtJ_G0022532.1 mouse_genomes_project 16 28387595 28405772 + MGP_NODShiLtJ_P0043647 Hrasls protein_coding protein_coding MGP_NODShiLtJ_T0043648.1 MGP_NODShiLtJ_G0022532.1 mouse_genomes_project 16 28387617 28405619 + Hrasls protein_coding processed_transcript MGP_NODShiLtJ_T0043649.1 MGP_NODShiLtJ_G0022532.1 mouse_genomes_project 16 28387657 28397823 + MGP_NODShiLtJ_P0043649 Hrasls protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0101072.1 MGP_NODShiLtJ_G0039431.1 mouse_genomes_project 16 51101378 51102888 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0100236.1 MGP_NODShiLtJ_G0038630.1 mouse_genomes_project 16 96781215 96781368 + Gm27295 snoRNA snoRNA MGP_NODShiLtJ_T0045043.1 MGP_NODShiLtJ_G0022912.1 mouse_genomes_project 16 109230047 109258695 + MGP_NODShiLtJ_P0045043 Sh3bgr protein_coding protein_coding MGP_NODShiLtJ_T0045044.1 MGP_NODShiLtJ_G0022912.1 mouse_genomes_project 16 109230248 109254237 + MGP_NODShiLtJ_P0045044 Sh3bgr protein_coding protein_coding MGP_NODShiLtJ_T0045045.1 MGP_NODShiLtJ_G0022912.1 mouse_genomes_project 16 109230248 109258690 + MGP_NODShiLtJ_P0045045 Sh3bgr protein_coding protein_coding MGP_NODShiLtJ_T0045046.1 MGP_NODShiLtJ_G0022912.1 mouse_genomes_project 16 109230281 109249773 + MGP_NODShiLtJ_P0045046 Sh3bgr protein_coding protein_coding MGP_NODShiLtJ_T0045047.1 MGP_NODShiLtJ_G0022912.1 mouse_genomes_project 16 109230306 109254268 + MGP_NODShiLtJ_P0045047 Sh3bgr protein_coding protein_coding MGP_NODShiLtJ_T0045048.1 MGP_NODShiLtJ_G0022912.1 mouse_genomes_project 16 109234961 109249773 + MGP_NODShiLtJ_P0045048 Sh3bgr protein_coding protein_coding MGP_NODShiLtJ_T0045049.1 MGP_NODShiLtJ_G0022912.1 mouse_genomes_project 16 109235868 109254240 + MGP_NODShiLtJ_P0045049 Sh3bgr protein_coding protein_coding MGP_NODShiLtJ_T0045050.1 MGP_NODShiLtJ_G0022912.1 mouse_genomes_project 16 109249680 109258687 + MGP_NODShiLtJ_P0045050 Sh3bgr protein_coding protein_coding MGP_NODShiLtJ_T0043751.1 MGP_NODShiLtJ_G0022556.1 mouse_genomes_project 16 31401230 31466739 - MGP_NODShiLtJ_P0043751 Pak2 protein_coding protein_coding MGP_NODShiLtJ_T0043752.1 MGP_NODShiLtJ_G0022556.1 mouse_genomes_project 16 31418786 31429511 - Pak2 protein_coding retained_intron MGP_NODShiLtJ_T0000934.1 MGP_NODShiLtJ_G0000862.1 mouse_genomes_project 16 22513226 22514979 + TEC TEC MGP_NODShiLtJ_T0011298.1 MGP_NODShiLtJ_G0009431.1 mouse_genomes_project 16 36349766 36350084 - Gm25902 misc_RNA misc_RNA MGP_NODShiLtJ_T0013058.1 MGP_NODShiLtJ_G0011166.1 mouse_genomes_project 16 51101375 51102657 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101432.1 MGP_NODShiLtJ_G0039621.1 mouse_genomes_project 16 18540060 18547468 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0010066.1 MGP_NODShiLtJ_G0008199.1 mouse_genomes_project 16 103530591 103530665 + Gm22933 miRNA miRNA MGP_NODShiLtJ_T0013070.1 MGP_NODShiLtJ_G0011178.1 mouse_genomes_project 16 83615700 83616708 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000939.1 MGP_NODShiLtJ_G0000867.1 mouse_genomes_project 16 61818217 61820504 - TEC TEC MGP_NODShiLtJ_T0044886.1 MGP_NODShiLtJ_G0022884.1 mouse_genomes_project 16 105026393 105029072 - MGP_NODShiLtJ_P0044886 4930563D23Rik protein_coding protein_coding MGP_NODShiLtJ_T0044491.1 MGP_NODShiLtJ_G0022754.1 mouse_genomes_project 16 63032938 63033815 - MGP_NODShiLtJ_P0044491 Olfr204 protein_coding protein_coding MGP_NODShiLtJ_T0044768.1 MGP_NODShiLtJ_G0022862.1 mouse_genomes_project 16 103597368 103630390 - MGP_NODShiLtJ_P0044768 Paxbp1 protein_coding protein_coding MGP_NODShiLtJ_T0044769.1 MGP_NODShiLtJ_G0022862.1 mouse_genomes_project 16 103598241 103630010 - MGP_NODShiLtJ_P0044769 Paxbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044770.1 MGP_NODShiLtJ_G0022862.1 mouse_genomes_project 16 103600174 103602549 - Paxbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0044771.1 MGP_NODShiLtJ_G0022862.1 mouse_genomes_project 16 103609079 103615101 - Paxbp1 protein_coding retained_intron MGP_NODShiLtJ_T0044772.1 MGP_NODShiLtJ_G0022862.1 mouse_genomes_project 16 103609824 103614791 - MGP_NODShiLtJ_P0044772 Paxbp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044773.1 MGP_NODShiLtJ_G0022862.1 mouse_genomes_project 16 103609943 103611924 - Paxbp1 protein_coding retained_intron MGP_NODShiLtJ_T0044774.1 MGP_NODShiLtJ_G0022862.1 mouse_genomes_project 16 103614725 103619177 - Paxbp1 protein_coding retained_intron MGP_NODShiLtJ_T0044775.1 MGP_NODShiLtJ_G0022862.1 mouse_genomes_project 16 103615848 103630200 - Paxbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0044695.1 MGP_NODShiLtJ_G0022835.1 mouse_genomes_project 16 101287903 101288504 + MGP_NODShiLtJ_P0044695 Gm10229 protein_coding protein_coding MGP_NODShiLtJ_T0013046.1 MGP_NODShiLtJ_G0011154.1 mouse_genomes_project 16 40290044 40291042 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043563.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561451 21567835 + MGP_NODShiLtJ_P0043563 Eif4a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043564.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561455 21562998 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043565.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561455 21567010 + MGP_NODShiLtJ_P0043565 Eif4a2 protein_coding protein_coding MGP_NODShiLtJ_T0043566.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561455 21566883 + MGP_NODShiLtJ_P0043566 Eif4a2 protein_coding protein_coding MGP_NODShiLtJ_T0043567.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561456 21562791 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043568.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561456 21562902 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043569.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561456 21567625 + MGP_NODShiLtJ_P0043569 Eif4a2 protein_coding protein_coding MGP_NODShiLtJ_T0043570.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561456 21567645 + MGP_NODShiLtJ_P0043570 Eif4a2 protein_coding protein_coding MGP_NODShiLtJ_T0043571.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561464 21564858 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043572.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561468 21564407 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043573.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561470 21564016 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043574.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561474 21562871 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043575.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561474 21567629 + MGP_NODShiLtJ_P0043575 Eif4a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043576.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561475 21567646 + MGP_NODShiLtJ_P0043576 Eif4a2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043577.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561476 21563945 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043578.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21561614 21564348 + Eif4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0043579.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21562279 21563168 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043580.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21562928 21564264 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043581.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21563673 21566108 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043582.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21563742 21564495 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043583.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21563930 21565325 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043584.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21564369 21565639 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043585.1 MGP_NODShiLtJ_G0022507.1 mouse_genomes_project 16 21564396 21566032 + Eif4a2 protein_coding retained_intron MGP_NODShiLtJ_T0043438.1 MGP_NODShiLtJ_G0022477.1 mouse_genomes_project 16 18723402 18728720 - MGP_NODShiLtJ_P0043438 Alg3 protein_coding protein_coding MGP_NODShiLtJ_T0043439.1 MGP_NODShiLtJ_G0022477.1 mouse_genomes_project 16 18723423 18728683 - MGP_NODShiLtJ_P0043439 Alg3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043440.1 MGP_NODShiLtJ_G0022477.1 mouse_genomes_project 16 18723424 18728699 - MGP_NODShiLtJ_P0043440 Alg3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043441.1 MGP_NODShiLtJ_G0022477.1 mouse_genomes_project 16 18726693 18728704 - Alg3 protein_coding processed_transcript MGP_NODShiLtJ_T0044483.1 MGP_NODShiLtJ_G0022747.1 mouse_genomes_project 16 62687016 62687895 - MGP_NODShiLtJ_P0044483 Olfr190 protein_coding protein_coding MGP_NODShiLtJ_T0044484.1 MGP_NODShiLtJ_G0022747.1 mouse_genomes_project 16 62687016 62692394 - MGP_NODShiLtJ_P0044484 Olfr190 protein_coding protein_coding MGP_NODShiLtJ_T0010059.1 MGP_NODShiLtJ_G0008192.1 mouse_genomes_project 16 82817200 82817278 - Mir691 miRNA miRNA MGP_NODShiLtJ_T0042884.1 MGP_NODShiLtJ_G0022354.1 mouse_genomes_project 16 8290453 8330568 - MGP_NODShiLtJ_P0042884 Gspt1 protein_coding protein_coding MGP_NODShiLtJ_T0042885.1 MGP_NODShiLtJ_G0022354.1 mouse_genomes_project 16 8291213 8330507 - MGP_NODShiLtJ_P0042885 Gspt1 protein_coding protein_coding MGP_NODShiLtJ_T0042886.1 MGP_NODShiLtJ_G0022354.1 mouse_genomes_project 16 8291562 8295660 - MGP_NODShiLtJ_P0042886 Gspt1 protein_coding protein_coding MGP_NODShiLtJ_T0042887.1 MGP_NODShiLtJ_G0022354.1 mouse_genomes_project 16 8293746 8301035 - Gspt1 protein_coding retained_intron MGP_NODShiLtJ_T0042888.1 MGP_NODShiLtJ_G0022354.1 mouse_genomes_project 16 8303441 8312287 - Gspt1 protein_coding retained_intron MGP_NODShiLtJ_T0042903.1 MGP_NODShiLtJ_G0022359.1 mouse_genomes_project 16 9110486 9121764 + Shisa9 protein_coding processed_transcript MGP_NODShiLtJ_T0042904.1 MGP_NODShiLtJ_G0022359.1 mouse_genomes_project 16 9110954 9429567 + MGP_NODShiLtJ_P0042904 Shisa9 protein_coding protein_coding MGP_NODShiLtJ_T0042905.1 MGP_NODShiLtJ_G0022359.1 mouse_genomes_project 16 9110954 9430520 + MGP_NODShiLtJ_P0042905 Shisa9 protein_coding protein_coding MGP_NODShiLtJ_T0042906.1 MGP_NODShiLtJ_G0022359.1 mouse_genomes_project 16 9111051 9116458 + Shisa9 protein_coding processed_transcript MGP_NODShiLtJ_T0043586.1 MGP_NODShiLtJ_G0022508.1 mouse_genomes_project 16 21567641 21585452 - MGP_NODShiLtJ_P0043586 Rfc4 protein_coding protein_coding MGP_NODShiLtJ_T0043587.1 MGP_NODShiLtJ_G0022508.1 mouse_genomes_project 16 21567649 21585432 - MGP_NODShiLtJ_P0043587 Rfc4 protein_coding protein_coding MGP_NODShiLtJ_T0043588.1 MGP_NODShiLtJ_G0022508.1 mouse_genomes_project 16 21567693 21568443 - Rfc4 protein_coding retained_intron MGP_NODShiLtJ_T0043589.1 MGP_NODShiLtJ_G0022508.1 mouse_genomes_project 16 21568405 21585406 - MGP_NODShiLtJ_P0043589 Rfc4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043590.1 MGP_NODShiLtJ_G0022508.1 mouse_genomes_project 16 21576939 21585443 - MGP_NODShiLtJ_P0043590 Rfc4 protein_coding protein_coding MGP_NODShiLtJ_T0044711.1 MGP_NODShiLtJ_G0022849.1 mouse_genomes_project 16 101907387 101907966 - MGP_NODShiLtJ_P0044711 Krtap8-1 protein_coding protein_coding MGP_NODShiLtJ_T0042618.1 MGP_NODShiLtJ_G0022288.1 mouse_genomes_project 16 390729 424105 - MGP_NODShiLtJ_P0042618 Nlrc3 protein_coding protein_coding MGP_NODShiLtJ_T0042619.1 MGP_NODShiLtJ_G0022288.1 mouse_genomes_project 16 391332 424192 - MGP_NODShiLtJ_P0042619 Nlrc3 protein_coding protein_coding MGP_NODShiLtJ_T0042620.1 MGP_NODShiLtJ_G0022288.1 mouse_genomes_project 16 394304 424192 - Nlrc3 protein_coding retained_intron MGP_NODShiLtJ_T0042621.1 MGP_NODShiLtJ_G0022288.1 mouse_genomes_project 16 394313 411183 - Nlrc3 protein_coding retained_intron MGP_NODShiLtJ_T0013011.1 MGP_NODShiLtJ_G0011119.1 mouse_genomes_project 16 12873889 12874943 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044521.1 MGP_NODShiLtJ_G0022764.1 mouse_genomes_project 16 67769899 67780105 + MGP_NODShiLtJ_P0044521 Stx19 protein_coding protein_coding MGP_NODShiLtJ_T0044634.1 MGP_NODShiLtJ_G0022804.1 mouse_genomes_project 16 99383309 99399752 + MGP_NODShiLtJ_P0044634 N6amt1 protein_coding protein_coding MGP_NODShiLtJ_T0044635.1 MGP_NODShiLtJ_G0022804.1 mouse_genomes_project 16 99383325 99397853 + MGP_NODShiLtJ_P0044635 N6amt1 protein_coding protein_coding MGP_NODShiLtJ_T0044636.1 MGP_NODShiLtJ_G0022804.1 mouse_genomes_project 16 99383327 99399866 + MGP_NODShiLtJ_P0044636 N6amt1 protein_coding protein_coding MGP_NODShiLtJ_T0011304.1 MGP_NODShiLtJ_G0009437.1 mouse_genomes_project 16 75605453 75605739 + Gm23591 misc_RNA misc_RNA MGP_NODShiLtJ_T0044188.1 MGP_NODShiLtJ_G0022663.1 mouse_genomes_project 16 45149213 45205734 + MGP_NODShiLtJ_P0044188 Usf3 protein_coding protein_coding MGP_NODShiLtJ_T0044189.1 MGP_NODShiLtJ_G0022663.1 mouse_genomes_project 16 45149306 45193737 + Usf3 protein_coding retained_intron MGP_NODShiLtJ_T0044190.1 MGP_NODShiLtJ_G0022663.1 mouse_genomes_project 16 45149306 45191170 + MGP_NODShiLtJ_P0044190 Usf3 protein_coding protein_coding MGP_NODShiLtJ_T0044191.1 MGP_NODShiLtJ_G0022663.1 mouse_genomes_project 16 45149306 45205732 + MGP_NODShiLtJ_P0044191 Usf3 protein_coding protein_coding MGP_NODShiLtJ_T0100240.1 MGP_NODShiLtJ_G0038634.1 mouse_genomes_project 16 99842799 99842887 - Gm23994 snoRNA snoRNA MGP_NODShiLtJ_T0044468.1 MGP_NODShiLtJ_G0022741.1 mouse_genomes_project 16 62471458 62492801 - MGP_NODShiLtJ_P0044468 Olfr180 protein_coding protein_coding MGP_NODShiLtJ_T0044469.1 MGP_NODShiLtJ_G0022741.1 mouse_genomes_project 16 62472683 62480125 - MGP_NODShiLtJ_P0044469 Olfr180 protein_coding protein_coding MGP_NODShiLtJ_T0044470.1 MGP_NODShiLtJ_G0022741.1 mouse_genomes_project 16 62473231 62480125 - MGP_NODShiLtJ_P0044470 Olfr180 protein_coding protein_coding MGP_NODShiLtJ_T0043454.1 MGP_NODShiLtJ_G0022480.1 mouse_genomes_project 16 18773300 18785344 + MGP_NODShiLtJ_P0043454 protein_coding protein_coding MGP_NODShiLtJ_T0043455.1 MGP_NODShiLtJ_G0022480.1 mouse_genomes_project 16 18773352 18785344 + MGP_NODShiLtJ_P0043455 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043456.1 MGP_NODShiLtJ_G0022480.1 mouse_genomes_project 16 18773364 18774403 + protein_coding processed_transcript MGP_NODShiLtJ_T0043457.1 MGP_NODShiLtJ_G0022480.1 mouse_genomes_project 16 18775879 18785351 + MGP_NODShiLtJ_P0043457 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043458.1 MGP_NODShiLtJ_G0022480.1 mouse_genomes_project 16 18775879 18785351 + MGP_NODShiLtJ_P0043458 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043459.1 MGP_NODShiLtJ_G0022480.1 mouse_genomes_project 16 18780929 18781639 + protein_coding processed_transcript MGP_NODShiLtJ_T0043460.1 MGP_NODShiLtJ_G0022480.1 mouse_genomes_project 16 18781274 18782291 + protein_coding processed_transcript MGP_NODShiLtJ_T0043461.1 MGP_NODShiLtJ_G0022480.1 mouse_genomes_project 16 18781341 18784032 + protein_coding processed_transcript MGP_NODShiLtJ_T0044062.1 MGP_NODShiLtJ_G0022631.1 mouse_genomes_project 16 37874348 37938087 + MGP_NODShiLtJ_P0044062 Fstl1 protein_coding protein_coding MGP_NODShiLtJ_T0044063.1 MGP_NODShiLtJ_G0022631.1 mouse_genomes_project 16 37874550 37892415 + Fstl1 protein_coding processed_transcript MGP_NODShiLtJ_T0044064.1 MGP_NODShiLtJ_G0022631.1 mouse_genomes_project 16 37874627 37919509 + Fstl1 protein_coding retained_intron MGP_NODShiLtJ_T0044065.1 MGP_NODShiLtJ_G0022631.1 mouse_genomes_project 16 37916272 37935995 + Fstl1 protein_coding processed_transcript MGP_NODShiLtJ_T0044066.1 MGP_NODShiLtJ_G0022631.1 mouse_genomes_project 16 37924301 37937195 + Fstl1 protein_coding processed_transcript MGP_NODShiLtJ_T0043101.1 MGP_NODShiLtJ_G0022404.1 mouse_genomes_project 16 14955421 14986263 + MGP_NODShiLtJ_P0043101 Hic2 protein_coding protein_coding MGP_NODShiLtJ_T0043102.1 MGP_NODShiLtJ_G0022404.1 mouse_genomes_project 16 14955513 14984428 + MGP_NODShiLtJ_P0043102 Hic2 protein_coding protein_coding MGP_NODShiLtJ_T0043797.1 MGP_NODShiLtJ_G0022571.1 mouse_genomes_project 16 32028724 32052454 + MGP_NODShiLtJ_P0043797 Tfrc protein_coding protein_coding MGP_NODShiLtJ_T0043798.1 MGP_NODShiLtJ_G0022571.1 mouse_genomes_project 16 32028787 32043362 + MGP_NODShiLtJ_P0043798 Tfrc protein_coding protein_coding MGP_NODShiLtJ_T0043799.1 MGP_NODShiLtJ_G0022571.1 mouse_genomes_project 16 32029054 32033061 + MGP_NODShiLtJ_P0043799 Tfrc protein_coding protein_coding MGP_NODShiLtJ_T0043800.1 MGP_NODShiLtJ_G0022571.1 mouse_genomes_project 16 32035064 32037020 + Tfrc protein_coding retained_intron MGP_NODShiLtJ_T0043801.1 MGP_NODShiLtJ_G0022571.1 mouse_genomes_project 16 32038141 32040744 + Tfrc protein_coding retained_intron MGP_NODShiLtJ_T0043802.1 MGP_NODShiLtJ_G0022571.1 mouse_genomes_project 16 32044062 32052450 + Tfrc protein_coding retained_intron MGP_NODShiLtJ_T0044786.1 MGP_NODShiLtJ_G0022868.1 mouse_genomes_project 16 104015641 104046089 + MGP_NODShiLtJ_P0044786 Gm21970 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044787.1 MGP_NODShiLtJ_G0022868.1 mouse_genomes_project 16 104015641 104046089 + MGP_NODShiLtJ_P0044787 Gm21970 protein_coding protein_coding MGP_NODShiLtJ_T0003596.1 MGP_NODShiLtJ_G0003253.1 mouse_genomes_project 16 10637730 10658342 - antisense antisense MGP_NODShiLtJ_T0003597.1 MGP_NODShiLtJ_G0003253.1 mouse_genomes_project 16 10650567 10658338 - antisense antisense MGP_NODShiLtJ_T0043361.1 MGP_NODShiLtJ_G0022462.1 mouse_genomes_project 16 17666891 17738957 - MGP_NODShiLtJ_P0043361 Lamp3 protein_coding protein_coding MGP_NODShiLtJ_T0044490.1 MGP_NODShiLtJ_G0022753.1 mouse_genomes_project 16 62991008 62991932 - MGP_NODShiLtJ_P0044490 Olfr202 protein_coding protein_coding MGP_NODShiLtJ_T0044681.1 MGP_NODShiLtJ_G0022823.1 mouse_genomes_project 16 100988514 100989147 + MGP_NODShiLtJ_P0044681 Gm5965 protein_coding protein_coding MGP_NODShiLtJ_T0044227.1 MGP_NODShiLtJ_G0022672.1 mouse_genomes_project 16 45923001 45999640 + MGP_NODShiLtJ_P0044227 protein_coding protein_coding MGP_NODShiLtJ_T0043608.1 MGP_NODShiLtJ_G0022518.1 mouse_genomes_project 16 22937603 23569770 + MGP_NODShiLtJ_P0043608 Lpp protein_coding protein_coding MGP_NODShiLtJ_T0043609.1 MGP_NODShiLtJ_G0022518.1 mouse_genomes_project 16 22994517 23569770 + MGP_NODShiLtJ_P0043609 Lpp protein_coding protein_coding MGP_NODShiLtJ_T0043610.1 MGP_NODShiLtJ_G0022518.1 mouse_genomes_project 16 23273930 23569770 + MGP_NODShiLtJ_P0043610 Lpp protein_coding protein_coding MGP_NODShiLtJ_T0011301.1 MGP_NODShiLtJ_G0009434.1 mouse_genomes_project 16 49055146 49055460 - Gm25318 misc_RNA misc_RNA MGP_NODShiLtJ_T0044028.1 MGP_NODShiLtJ_G0022624.1 mouse_genomes_project 16 36869082 36906139 - MGP_NODShiLtJ_P0044028 Fbxo40 protein_coding protein_coding MGP_NODShiLtJ_T0044029.1 MGP_NODShiLtJ_G0022624.1 mouse_genomes_project 16 36871553 36883188 - Fbxo40 protein_coding processed_transcript MGP_NODShiLtJ_T0044030.1 MGP_NODShiLtJ_G0022624.1 mouse_genomes_project 16 36871662 36877817 - Fbxo40 protein_coding retained_intron MGP_NODShiLtJ_T0044031.1 MGP_NODShiLtJ_G0022624.1 mouse_genomes_project 16 36871695 36883548 - MGP_NODShiLtJ_P0044031 Fbxo40 protein_coding protein_coding MGP_NODShiLtJ_T0013026.1 MGP_NODShiLtJ_G0011134.1 mouse_genomes_project 16 19273138 19274745 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010063.1 MGP_NODShiLtJ_G0008196.1 mouse_genomes_project 16 86907990 86908061 + Mir125b-2 miRNA miRNA MGP_NODShiLtJ_T0100222.1 MGP_NODShiLtJ_G0038616.1 mouse_genomes_project 16 59256902 59257037 - Gm22422 snoRNA snoRNA MGP_NODShiLtJ_T0010060.1 MGP_NODShiLtJ_G0008193.1 mouse_genomes_project 16 84659185 84659295 + Gm22923 miRNA miRNA MGP_NODShiLtJ_T0043030.1 MGP_NODShiLtJ_G0022392.1 mouse_genomes_project 16 14543931 14547247 - MGP_NODShiLtJ_P0043030 Igll1 protein_coding protein_coding MGP_NODShiLtJ_T0043031.1 MGP_NODShiLtJ_G0022392.1 mouse_genomes_project 16 14543931 14547079 - MGP_NODShiLtJ_P0043031 Igll1 protein_coding protein_coding MGP_NODShiLtJ_T0043032.1 MGP_NODShiLtJ_G0022392.1 mouse_genomes_project 16 14543934 14547247 - Igll1 protein_coding retained_intron MGP_NODShiLtJ_T0003624.1 MGP_NODShiLtJ_G0003275.1 mouse_genomes_project 16 38724102 38728080 - Gm17103 antisense antisense MGP_NODShiLtJ_T0017356.1 MGP_NODShiLtJ_G0015188.1 mouse_genomes_project 16 43517080 43680329 - 4932412D23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017357.1 MGP_NODShiLtJ_G0015188.1 mouse_genomes_project 16 43608599 43680504 - 4932412D23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017358.1 MGP_NODShiLtJ_G0015188.1 mouse_genomes_project 16 43608960 43680482 - 4932412D23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017359.1 MGP_NODShiLtJ_G0015188.1 mouse_genomes_project 16 43609112 43680488 - 4932412D23Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0044413.1 MGP_NODShiLtJ_G0022720.1 mouse_genomes_project 16 60166241 60254142 - MGP_NODShiLtJ_P0044413 Tmem45a protein_coding protein_coding MGP_NODShiLtJ_T0044414.1 MGP_NODShiLtJ_G0022720.1 mouse_genomes_project 16 60167571 60171371 - Tmem45a protein_coding processed_transcript MGP_NODShiLtJ_T0044415.1 MGP_NODShiLtJ_G0022720.1 mouse_genomes_project 16 60190112 60197508 - MGP_NODShiLtJ_P0044415 Tmem45a protein_coding protein_coding MGP_NODShiLtJ_T0043778.1 MGP_NODShiLtJ_G0022562.1 mouse_genomes_project 16 31642512 31653494 + Wdr53 protein_coding processed_transcript MGP_NODShiLtJ_T0043779.1 MGP_NODShiLtJ_G0022562.1 mouse_genomes_project 16 31642512 31653815 + MGP_NODShiLtJ_P0043779 Wdr53 protein_coding protein_coding MGP_NODShiLtJ_T0043780.1 MGP_NODShiLtJ_G0022562.1 mouse_genomes_project 16 31642538 31653824 + MGP_NODShiLtJ_P0043780 Wdr53 protein_coding protein_coding MGP_NODShiLtJ_T0043781.1 MGP_NODShiLtJ_G0022562.1 mouse_genomes_project 16 31642686 31648697 + Wdr53 protein_coding retained_intron MGP_NODShiLtJ_T0000947.1 MGP_NODShiLtJ_G0000874.1 mouse_genomes_project 16 86655293 86660278 + TEC TEC MGP_NODShiLtJ_T0044693.1 MGP_NODShiLtJ_G0022833.1 mouse_genomes_project 16 101215568 101216169 - MGP_NODShiLtJ_P0044693 Krtap16-3 protein_coding protein_coding MGP_NODShiLtJ_T0017386.1 MGP_NODShiLtJ_G0015198.1 mouse_genomes_project 16 104260042 104272385 + Gm15964 processed_transcript processed_transcript MGP_NODShiLtJ_T0044228.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023381 46045675 + MGP_NODShiLtJ_P0044228 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044229.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023381 46044282 + MGP_NODShiLtJ_P0044229 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044230.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023381 46044968 + MGP_NODShiLtJ_P0044230 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044231.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023381 46044968 + MGP_NODShiLtJ_P0044231 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044232.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023381 46044282 + MGP_NODShiLtJ_P0044232 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044233.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023395 46060879 + MGP_NODShiLtJ_P0044233 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044234.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023409 46060845 + MGP_NODShiLtJ_P0044234 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044235.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023445 46045890 + MGP_NODShiLtJ_P0044235 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044236.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46023452 46040467 + MGP_NODShiLtJ_P0044236 Cd200r3 protein_coding protein_coding MGP_NODShiLtJ_T0044237.1 MGP_NODShiLtJ_G0022673.1 mouse_genomes_project 16 46044853 46046453 + Cd200r3 protein_coding retained_intron MGP_NODShiLtJ_T0100200.1 MGP_NODShiLtJ_G0038594.1 mouse_genomes_project 16 21564080 21564205 + Gm24201 snoRNA snoRNA MGP_NODShiLtJ_T0044690.1 MGP_NODShiLtJ_G0022830.1 mouse_genomes_project 16 101141048 101141531 - MGP_NODShiLtJ_P0044690 Krtap19-5 protein_coding protein_coding MGP_NODShiLtJ_T0044709.1 MGP_NODShiLtJ_G0022847.1 mouse_genomes_project 16 101770424 101772262 - MGP_NODShiLtJ_P0044709 Krtap21-1 protein_coding protein_coding MGP_NODShiLtJ_T0042775.1 MGP_NODShiLtJ_G0022326.1 mouse_genomes_project 16 5448019 5451849 - MGP_NODShiLtJ_P0042775 Tmem186 protein_coding protein_coding MGP_NODShiLtJ_T0098969.1 MGP_NODShiLtJ_G0037363.1 mouse_genomes_project 16 58771847 58771954 - Gm23003 snRNA snRNA MGP_NODShiLtJ_T0043002.1 MGP_NODShiLtJ_G0022387.1 mouse_genomes_project 16 13878973 13885681 + MGP_NODShiLtJ_P0043002 Yars2 protein_coding protein_coding MGP_NODShiLtJ_T0043003.1 MGP_NODShiLtJ_G0022387.1 mouse_genomes_project 16 13878982 13884262 + Yars2 protein_coding retained_intron MGP_NODShiLtJ_T0043004.1 MGP_NODShiLtJ_G0022387.1 mouse_genomes_project 16 13878986 13886379 + MGP_NODShiLtJ_P0043004 Yars2 protein_coding protein_coding MGP_NODShiLtJ_T0043005.1 MGP_NODShiLtJ_G0022387.1 mouse_genomes_project 16 13878989 13886371 + MGP_NODShiLtJ_P0043005 Yars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043006.1 MGP_NODShiLtJ_G0022387.1 mouse_genomes_project 16 13879561 13883980 + Yars2 protein_coding processed_transcript MGP_NODShiLtJ_T0043007.1 MGP_NODShiLtJ_G0022387.1 mouse_genomes_project 16 13880608 13884119 + MGP_NODShiLtJ_P0043007 Yars2 protein_coding protein_coding MGP_NODShiLtJ_T0010070.1 MGP_NODShiLtJ_G0008203.1 mouse_genomes_project 16 106177722 106177819 + Mir802 miRNA miRNA MGP_NODShiLtJ_T0003602.1 MGP_NODShiLtJ_G0003258.1 mouse_genomes_project 16 14862819 14863894 + Gm15648 antisense antisense MGP_NODShiLtJ_T0045073.1 MGP_NODShiLtJ_G0022920.1 mouse_genomes_project 16 110577086 110583494 - Fam3b protein_coding processed_transcript MGP_NODShiLtJ_T0045074.1 MGP_NODShiLtJ_G0022920.1 mouse_genomes_project 16 110577120 110613370 - MGP_NODShiLtJ_P0045074 Fam3b protein_coding protein_coding MGP_NODShiLtJ_T0042937.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11153900 11230933 - MGP_NODShiLtJ_P0042937 Pdxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0042938.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11154330 11162864 - Pdxdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0042940.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11155924 11167967 - Pdxdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0042941.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11155929 11230827 - MGP_NODShiLtJ_P0042941 Pdxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0042942.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11156045 11159618 - Pdxdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0042943.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11158128 11230788 - Pdxdc1 protein_coding retained_intron MGP_NODShiLtJ_T0042944.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11158343 11161873 - Pdxdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0042945.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11159492 11162869 - Pdxdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0042946.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11160169 11160898 - Pdxdc1 protein_coding retained_intron MGP_NODShiLtJ_T0042947.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11170249 11230861 - MGP_NODShiLtJ_P0042947 Pdxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0042948.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11171813 11230937 - MGP_NODShiLtJ_P0042948 Pdxdc1 protein_coding protein_coding MGP_NODShiLtJ_T0042949.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11182803 11203139 - Pdxdc1 protein_coding retained_intron MGP_NODShiLtJ_T0042950.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11202969 11230791 - Pdxdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0042951.1 MGP_NODShiLtJ_G0022368.1 mouse_genomes_project 16 11208600 11230781 - Pdxdc1 protein_coding processed_transcript MGP_NODShiLtJ_T0010016.1 MGP_NODShiLtJ_G0008149.1 mouse_genomes_project 16 10706394 10706473 + Mir193b miRNA miRNA MGP_NODShiLtJ_T0043083.1 MGP_NODShiLtJ_G0022399.1 mouse_genomes_project 16 14836601 14838847 - MGP_NODShiLtJ_P0043083 Sdf2l1 protein_coding protein_coding MGP_NODShiLtJ_T0098976.1 MGP_NODShiLtJ_G0037370.1 mouse_genomes_project 16 90749583 90749682 + Gm24773 snRNA snRNA MGP_NODShiLtJ_T0043665.1 MGP_NODShiLtJ_G0022535.1 mouse_genomes_project 16 28766424 28843633 + MGP_NODShiLtJ_P0043665 Opa1 protein_coding protein_coding MGP_NODShiLtJ_T0043666.1 MGP_NODShiLtJ_G0022535.1 mouse_genomes_project 16 28766468 28800953 + Opa1 protein_coding retained_intron MGP_NODShiLtJ_T0043667.1 MGP_NODShiLtJ_G0022535.1 mouse_genomes_project 16 28766470 28840527 + MGP_NODShiLtJ_P0043667 Opa1 protein_coding protein_coding MGP_NODShiLtJ_T0043668.1 MGP_NODShiLtJ_G0022535.1 mouse_genomes_project 16 28766470 28836639 + MGP_NODShiLtJ_P0043668 Opa1 protein_coding protein_coding MGP_NODShiLtJ_T0043669.1 MGP_NODShiLtJ_G0022535.1 mouse_genomes_project 16 28766470 28817228 + MGP_NODShiLtJ_P0043669 Opa1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0043670.1 MGP_NODShiLtJ_G0022535.1 mouse_genomes_project 16 28766482 28840530 + Opa1 protein_coding retained_intron MGP_NODShiLtJ_T0043671.1 MGP_NODShiLtJ_G0022535.1 mouse_genomes_project 16 28772582 28797235 + MGP_NODShiLtJ_P0043671 Opa1 protein_coding protein_coding MGP_NODShiLtJ_T0043672.1 MGP_NODShiLtJ_G0022535.1 mouse_genomes_project 16 28802953 28805036 + Opa1 protein_coding retained_intron MGP_NODShiLtJ_T0044776.1 MGP_NODShiLtJ_G0022863.1 mouse_genomes_project 16 103639751 103654955 - MGP_NODShiLtJ_P0044776 4932438H23Rik protein_coding protein_coding MGP_NODShiLtJ_T0044777.1 MGP_NODShiLtJ_G0022863.1 mouse_genomes_project 16 103639751 103654955 - MGP_NODShiLtJ_P0044777 4932438H23Rik protein_coding protein_coding MGP_NODShiLtJ_T0044778.1 MGP_NODShiLtJ_G0022863.1 mouse_genomes_project 16 103641653 103695354 - MGP_NODShiLtJ_P0044778 4932438H23Rik protein_coding protein_coding MGP_NODShiLtJ_T0006760.1 MGP_NODShiLtJ_G0005566.1 mouse_genomes_project 16 1474889 1479453 - Gm16861 lincRNA lincRNA MGP_NODShiLtJ_T0043872.1 MGP_NODShiLtJ_G0022581.1 mouse_genomes_project 16 32592246 32663568 + MGP_NODShiLtJ_P0043872 Lmln protein_coding protein_coding MGP_NODShiLtJ_T0043873.1 MGP_NODShiLtJ_G0022581.1 mouse_genomes_project 16 32624056 32637559 + Lmln protein_coding retained_intron MGP_NODShiLtJ_T0043874.1 MGP_NODShiLtJ_G0022581.1 mouse_genomes_project 16 32651248 32658433 + Lmln protein_coding retained_intron MGP_NODShiLtJ_T0043875.1 MGP_NODShiLtJ_G0022581.1 mouse_genomes_project 16 32658786 32660128 + Lmln protein_coding processed_transcript MGP_NODShiLtJ_T0043975.1 MGP_NODShiLtJ_G0022612.1 mouse_genomes_project 16 36014288 36016017 + MGP_NODShiLtJ_P0043975 2010005H15Rik protein_coding protein_coding MGP_NODShiLtJ_T0043976.1 MGP_NODShiLtJ_G0022612.1 mouse_genomes_project 16 36014288 36015990 + MGP_NODShiLtJ_P0043976 2010005H15Rik protein_coding protein_coding MGP_NODShiLtJ_T0010025.1 MGP_NODShiLtJ_G0008158.1 mouse_genomes_project 16 16105220 16105299 - Mir1306 miRNA miRNA MGP_NODShiLtJ_T0044310.1 MGP_NODShiLtJ_G0022690.1 mouse_genomes_project 16 49657017 49657880 + MGP_NODShiLtJ_P0044310 Gm7275 protein_coding protein_coding MGP_NODShiLtJ_T0013033.1 MGP_NODShiLtJ_G0011141.1 mouse_genomes_project 16 26243837 26244671 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042813.1 MGP_NODShiLtJ_G0022337.1 mouse_genomes_project 16 7410259 7422733 + MGP_NODShiLtJ_P0042813 Nubp1 protein_coding protein_coding MGP_NODShiLtJ_T0042814.1 MGP_NODShiLtJ_G0022337.1 mouse_genomes_project 16 7410260 7419977 + Nubp1 protein_coding processed_transcript MGP_NODShiLtJ_T0042815.1 MGP_NODShiLtJ_G0022337.1 mouse_genomes_project 16 7410265 7418856 + Nubp1 protein_coding retained_intron MGP_NODShiLtJ_T0042816.1 MGP_NODShiLtJ_G0022337.1 mouse_genomes_project 16 7410281 7422733 + Nubp1 protein_coding retained_intron MGP_NODShiLtJ_T0042817.1 MGP_NODShiLtJ_G0022337.1 mouse_genomes_project 16 7410375 7419742 + Nubp1 protein_coding retained_intron MGP_NODShiLtJ_T0042819.1 MGP_NODShiLtJ_G0022337.1 mouse_genomes_project 16 7419540 7421651 + Nubp1 protein_coding processed_transcript MGP_NODShiLtJ_T0044633.1 MGP_NODShiLtJ_G0022803.1 mouse_genomes_project 16 97526346 97578272 - MGP_NODShiLtJ_P0044633 Adamts5 protein_coding protein_coding MGP_NODShiLtJ_T0042622.1 MGP_NODShiLtJ_G0022289.1 mouse_genomes_project 16 426664 436666 - MGP_NODShiLtJ_P0042622 Slx4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042623.1 MGP_NODShiLtJ_G0022289.1 mouse_genomes_project 16 426682 449439 - MGP_NODShiLtJ_P0042623 Slx4 protein_coding protein_coding MGP_NODShiLtJ_T0042624.1 MGP_NODShiLtJ_G0022289.1 mouse_genomes_project 16 426683 443115 - MGP_NODShiLtJ_P0042624 Slx4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0042625.1 MGP_NODShiLtJ_G0022289.1 mouse_genomes_project 16 426687 433079 - Slx4 protein_coding retained_intron MGP_NODShiLtJ_T0042626.1 MGP_NODShiLtJ_G0022289.1 mouse_genomes_project 16 426692 429764 - Slx4 protein_coding retained_intron MGP_NODShiLtJ_T0042627.1 MGP_NODShiLtJ_G0022289.1 mouse_genomes_project 16 442164 449011 - MGP_NODShiLtJ_P0042627 Slx4 protein_coding protein_coding MGP_NODShiLtJ_T0042628.1 MGP_NODShiLtJ_G0022289.1 mouse_genomes_project 16 448761 451529 - MGP_NODShiLtJ_P0042628 Slx4 protein_coding protein_coding MGP_NODShiLtJ_T0042629.1 MGP_NODShiLtJ_G0022289.1 mouse_genomes_project 16 448959 451511 - MGP_NODShiLtJ_P0042629 Slx4 protein_coding protein_coding MGP_NODShiLtJ_T0098942.1 MGP_NODShiLtJ_G0037336.1 mouse_genomes_project 16 20034914 20035020 + Gm24898 snRNA snRNA MGP_NODShiLtJ_T0098948.1 MGP_NODShiLtJ_G0037342.1 mouse_genomes_project 16 30095456 30095563 + Gm26295 snRNA snRNA MGP_NODShiLtJ_T0044092.1 MGP_NODShiLtJ_G0022642.1 mouse_genomes_project 16 38590530 38597810 - MGP_NODShiLtJ_P0044092 Adprh protein_coding protein_coding MGP_NODShiLtJ_T0003592.1 MGP_NODShiLtJ_G0003249.1 mouse_genomes_project 16 1251499 1252440 + Gm15859 antisense antisense MGP_NODShiLtJ_T0044710.1 MGP_NODShiLtJ_G0022848.1 mouse_genomes_project 16 101780592 101781306 - MGP_NODShiLtJ_P0044710 Krtap6-2 protein_coding protein_coding MGP_NODShiLtJ_T0013040.1 MGP_NODShiLtJ_G0011148.1 mouse_genomes_project 16 35702674 35702947 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0043249.1 MGP_NODShiLtJ_G0022435.1 mouse_genomes_project 16 16034395 16050094 - MGP_NODShiLtJ_P0043249 Zdhhc8 protein_coding protein_coding MGP_NODShiLtJ_T0010017.1 MGP_NODShiLtJ_G0008150.1 mouse_genomes_project 16 10710711 10710798 + Mir365-1 miRNA miRNA MGP_NODShiLtJ_T0042990.1 MGP_NODShiLtJ_G0022380.1 mouse_genomes_project 16 12319455 12337591 + MGP_NODShiLtJ_P0042990 Efcab1 protein_coding protein_coding MGP_NODShiLtJ_T0013073.1 MGP_NODShiLtJ_G0011181.1 mouse_genomes_project 16 85117693 85118441 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0044758.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103512546 103594643 - MGP_NODShiLtJ_P0044758 Synj1 protein_coding protein_coding MGP_NODShiLtJ_T0044759.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103512555 103594430 - MGP_NODShiLtJ_P0044759 Synj1 protein_coding protein_coding MGP_NODShiLtJ_T0044760.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103512560 103527227 - MGP_NODShiLtJ_P0044760 Synj1 protein_coding protein_coding MGP_NODShiLtJ_T0044761.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103514686 103594448 - MGP_NODShiLtJ_P0044761 Synj1 protein_coding protein_coding MGP_NODShiLtJ_T0044762.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103515103 103523452 - Synj1 protein_coding processed_transcript MGP_NODShiLtJ_T0044763.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103515249 103521670 - MGP_NODShiLtJ_P0044763 Synj1 protein_coding protein_coding MGP_NODShiLtJ_T0044764.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103521274 103527232 - MGP_NODShiLtJ_P0044764 Synj1 protein_coding protein_coding MGP_NODShiLtJ_T0044765.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103538114 103593554 - Synj1 protein_coding retained_intron MGP_NODShiLtJ_T0044766.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103542618 103593553 - MGP_NODShiLtJ_P0044766 Synj1 protein_coding protein_coding MGP_NODShiLtJ_T0044767.1 MGP_NODShiLtJ_G0022861.1 mouse_genomes_project 16 103591805 103593556 - Synj1 protein_coding retained_intron MGP_NODShiLtJ_T0000946.1 MGP_NODShiLtJ_G0000873.1 mouse_genomes_project 16 86589243 86591813 - TEC TEC MGP_NODShiLtJ_T0044494.1 MGP_NODShiLtJ_G0022757.1 mouse_genomes_project 16 63139181 63198207 + MGP_NODShiLtJ_P0044494 Gabrr3 protein_coding protein_coding MGP_NODShiLtJ_T0042717.1 MGP_NODShiLtJ_G0022308.1 mouse_genomes_project 16 1481282 1506705 - MGP_NODShiLtJ_P0042717 Anks3 protein_coding protein_coding MGP_NODShiLtJ_T0010015.1 MGP_NODShiLtJ_G0008148.1 mouse_genomes_project 16 8330665 8330743 - Mir1945 miRNA miRNA MGP_NODShiLtJ_T0006780.1 MGP_NODShiLtJ_G0005583.1 mouse_genomes_project 16 29015775 29042430 + Gm26834 lincRNA lincRNA MGP_NODShiLtJ_T0044640.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99493028 99523954 + MGP_NODShiLtJ_P0044640 Usp16 protein_coding protein_coding MGP_NODShiLtJ_T0044641.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99493304 99523747 + MGP_NODShiLtJ_P0044641 Usp16 protein_coding protein_coding MGP_NODShiLtJ_T0044642.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99493310 99500308 + MGP_NODShiLtJ_P0044642 Usp16 protein_coding protein_coding MGP_NODShiLtJ_T0044643.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99493336 99523754 + MGP_NODShiLtJ_P0044643 Usp16 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0044644.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99493352 99499826 + Usp16 protein_coding retained_intron MGP_NODShiLtJ_T0044645.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99493368 99511247 + Usp16 protein_coding retained_intron MGP_NODShiLtJ_T0044646.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99493374 99504585 + Usp16 protein_coding processed_transcript MGP_NODShiLtJ_T0044647.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99493383 99523747 + MGP_NODShiLtJ_P0044647 Usp16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0044648.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99513076 99520348 + Usp16 protein_coding retained_intron MGP_NODShiLtJ_T0044649.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99521872 99523617 + Usp16 protein_coding retained_intron MGP_NODShiLtJ_T0044650.1 MGP_NODShiLtJ_G0022807.1 mouse_genomes_project 16 99523287 99523735 + Usp16 protein_coding retained_intron MGP_NODShiLtJ_T0042774.1 MGP_NODShiLtJ_G0022325.1 mouse_genomes_project 16 5436450 5437330 - MGP_NODShiLtJ_P0042774 protein_coding protein_coding MGP_NODShiLtJ_T0044429.1 MGP_NODShiLtJ_G0022729.1 mouse_genomes_project 16 61917298 61978778 + MGP_NODShiLtJ_P0044429 Dcbld2 protein_coding protein_coding MGP_NODShiLtJ_T0044430.1 MGP_NODShiLtJ_G0022729.1 mouse_genomes_project 16 61964237 61974429 + Dcbld2 protein_coding processed_transcript MGP_NODShiLtJ_T0044431.1 MGP_NODShiLtJ_G0022729.1 mouse_genomes_project 16 61964898 61965599 + Dcbld2 protein_coding processed_transcript MGP_NODShiLtJ_T0044432.1 MGP_NODShiLtJ_G0022729.1 mouse_genomes_project 16 61965429 61972872 + Dcbld2 protein_coding retained_intron MGP_NODShiLtJ_T0044433.1 MGP_NODShiLtJ_G0022729.1 mouse_genomes_project 16 61969263 61974878 + Dcbld2 protein_coding processed_transcript MGP_NODShiLtJ_T0044434.1 MGP_NODShiLtJ_G0022729.1 mouse_genomes_project 16 61969307 61975775 + Dcbld2 protein_coding retained_intron MGP_NODShiLtJ_T0044435.1 MGP_NODShiLtJ_G0022729.1 mouse_genomes_project 16 61969309 61975838 + Dcbld2 protein_coding retained_intron MGP_NODShiLtJ_T0043155.1 MGP_NODShiLtJ_G0022413.1 mouse_genomes_project 16 15302465 15319248 - MGP_NODShiLtJ_P0043155 Lrrc74b protein_coding protein_coding MGP_NODShiLtJ_T0043156.1 MGP_NODShiLtJ_G0022413.1 mouse_genomes_project 16 15302465 15319248 - MGP_NODShiLtJ_P0043156 Lrrc74b protein_coding protein_coding MGP_NODShiLtJ_T0043157.1 MGP_NODShiLtJ_G0022413.1 mouse_genomes_project 16 15303463 15312433 - Lrrc74b protein_coding processed_transcript MGP_NODShiLtJ_T0043158.1 MGP_NODShiLtJ_G0022413.1 mouse_genomes_project 16 15306811 15319245 - MGP_NODShiLtJ_P0043158 Lrrc74b protein_coding protein_coding MGP_NODShiLtJ_T0010039.1 MGP_NODShiLtJ_G0008172.1 mouse_genomes_project 16 31664791 31664925 - Mir1946a miRNA miRNA MGP_NODShiLtJ_T0003599.1 MGP_NODShiLtJ_G0003255.1 mouse_genomes_project 16 11685972 11688334 + Gm15868 antisense antisense MGP_NODShiLtJ_T0044596.1 MGP_NODShiLtJ_G0022793.1 mouse_genomes_project 16 88347980 88366660 + MGP_NODShiLtJ_P0044596 Chodl protein_coding protein_coding MGP_NODShiLtJ_T0044597.1 MGP_NODShiLtJ_G0022793.1 mouse_genomes_project 16 88347980 88371822 + MGP_NODShiLtJ_P0044597 Chodl protein_coding protein_coding MGP_NODShiLtJ_T0044598.1 MGP_NODShiLtJ_G0022793.1 mouse_genomes_project 16 88347980 88369992 + MGP_NODShiLtJ_P0044598 Chodl protein_coding protein_coding MGP_NODShiLtJ_T0044076.1 MGP_NODShiLtJ_G0022637.1 mouse_genomes_project 16 38435045 38482752 - MGP_NODShiLtJ_P0044076 Maats1 protein_coding protein_coding MGP_NODShiLtJ_T0044077.1 MGP_NODShiLtJ_G0022637.1 mouse_genomes_project 16 38462361 38482719 - MGP_NODShiLtJ_P0044077 Maats1 protein_coding protein_coding MGP_NODShiLtJ_T0044078.1 MGP_NODShiLtJ_G0022637.1 mouse_genomes_project 16 38472235 38483050 - Maats1 protein_coding processed_transcript MGP_NODShiLtJ_T0044067.1 MGP_NODShiLtJ_G0022632.1 mouse_genomes_project 16 37952485 37958001 - Gm36028 protein_coding retained_intron MGP_NODShiLtJ_T0044068.1 MGP_NODShiLtJ_G0022632.1 mouse_genomes_project 16 37952485 37962761 - MGP_NODShiLtJ_P0044068 Gm36028 protein_coding protein_coding MGP_NODShiLtJ_T0044489.1 MGP_NODShiLtJ_G0022752.1 mouse_genomes_project 16 62948178 62949214 - MGP_NODShiLtJ_P0044489 protein_coding protein_coding MGP_NODShiLtJ_T0044192.1 MGP_NODShiLtJ_G0022664.1 mouse_genomes_project 16 45218340 45319443 - MGP_NODShiLtJ_P0044192 Sidt1 protein_coding protein_coding MGP_NODShiLtJ_T0044193.1 MGP_NODShiLtJ_G0022664.1 mouse_genomes_project 16 45219797 45318980 - MGP_NODShiLtJ_P0044193 Sidt1 protein_coding protein_coding MGP_NODShiLtJ_T0044194.1 MGP_NODShiLtJ_G0022664.1 mouse_genomes_project 16 45253819 45265141 - Sidt1 protein_coding retained_intron MGP_NODShiLtJ_T0044195.1 MGP_NODShiLtJ_G0022664.1 mouse_genomes_project 16 45264700 45265800 - MGP_NODShiLtJ_P0044195 Sidt1 protein_coding protein_coding MGP_NODShiLtJ_T0044196.1 MGP_NODShiLtJ_G0022664.1 mouse_genomes_project 16 45267551 45318993 - Sidt1 protein_coding processed_transcript MGP_NODShiLtJ_T0042985.1 MGP_NODShiLtJ_G0022377.1 mouse_genomes_project 16 11894076 11901000 + MGP_NODShiLtJ_P0042985 Gm1758 protein_coding protein_coding MGP_NODShiLtJ_T0044381.1 MGP_NODShiLtJ_G0022714.1 mouse_genomes_project 16 59253670 59258969 - MGP_NODShiLtJ_P0044381 Trmt10c protein_coding protein_coding MGP_NODShiLtJ_T0013080.1 MGP_NODShiLtJ_G0011188.1 mouse_genomes_project 16 104181192 104183253 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0042744.1 MGP_NODShiLtJ_G0022317.1 mouse_genomes_project 16 1759917 1768597 - MGP_NODShiLtJ_P0042744 Nagpa protein_coding protein_coding MGP_NODShiLtJ_T0042745.1 MGP_NODShiLtJ_G0022317.1 mouse_genomes_project 16 1760023 1762377 - Nagpa protein_coding processed_transcript MGP_NODShiLtJ_T0042746.1 MGP_NODShiLtJ_G0022317.1 mouse_genomes_project 16 1764424 1768092 - Nagpa protein_coding retained_intron MGP_NODShiLtJ_T0044372.1 MGP_NODShiLtJ_G0022712.1 mouse_genomes_project 16 59192918 59229680 + MGP_NODShiLtJ_P0044372 Zbtb11 protein_coding protein_coding MGP_NODShiLtJ_T0044373.1 MGP_NODShiLtJ_G0022712.1 mouse_genomes_project 16 59207980 59211160 + Zbtb11 protein_coding retained_intron MGP_NODShiLtJ_T0098972.1 MGP_NODShiLtJ_G0037366.1 mouse_genomes_project 16 68919767 68919865 - Gm22769 snRNA snRNA MGP_NODShiLtJ_T0017355.1 MGP_NODShiLtJ_G0015187.1 mouse_genomes_project 16 32478877 32641940 - Gm17106 processed_transcript processed_transcript MGP_NODShiLtJ_T0042840.1 MGP_NODShiLtJ_G0022342.1 mouse_genomes_project 16 7818618 7820347 - MGP_NODShiLtJ_P0042840 Socs1 protein_coding protein_coding MGP_NODShiLtJ_T0097769.1 MGP_NODShiLtJ_G0036181.1 mouse_genomes_project 16 14822805 14826734 - pseudogene pseudogene MGP_NODShiLtJ_T0013030.1 MGP_NODShiLtJ_G0011138.1 mouse_genomes_project 16 21665079 21666106 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098286.1 MGP_NODShiLtJ_G0036693.1 mouse_genomes_project 16 24723527 24733761 - AU015336 sense_intronic sense_intronic MGP_NODShiLtJ_T0100235.1 MGP_NODShiLtJ_G0038629.1 mouse_genomes_project 16 96287506 96287633 + Gm26153 snoRNA snoRNA MGP_NODShiLtJ_T0043537.1 MGP_NODShiLtJ_G0022497.1 mouse_genomes_project 16 20559180 20563194 - Tra2b protein_coding retained_intron MGP_NODShiLtJ_T0043538.1 MGP_NODShiLtJ_G0022497.1 mouse_genomes_project 16 20559389 20581911 - MGP_NODShiLtJ_P0043538 Tra2b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0043539.1 MGP_NODShiLtJ_G0022497.1 mouse_genomes_project 16 20570129 20575228 - Tra2b protein_coding processed_transcript MGP_NODShiLtJ_T0043540.1 MGP_NODShiLtJ_G0022497.1 mouse_genomes_project 16 20573669 20582053 - Tra2b protein_coding retained_intron MGP_NODShiLtJ_T0043504.1 MGP_NODShiLtJ_G0022487.1 mouse_genomes_project 16 19096572 19097806 + MGP_NODShiLtJ_P0043504 Teddm3 protein_coding protein_coding MGP_NODShiLtJ_T0000931.1 MGP_NODShiLtJ_G0000859.1 mouse_genomes_project 16 15705656 15706822 + TEC TEC MGP_NODShiLtJ_T0043202.1 MGP_NODShiLtJ_G0022419.1 mouse_genomes_project 16 15533651 15545870 + MGP_NODShiLtJ_P0043202 Klhl22 protein_coding protein_coding MGP_NODShiLtJ_T0043203.1 MGP_NODShiLtJ_G0022419.1 mouse_genomes_project 16 15533654 15570474 + MGP_NODShiLtJ_P0043203 Klhl22 protein_coding protein_coding MGP_NODShiLtJ_T0043204.1 MGP_NODShiLtJ_G0022419.1 mouse_genomes_project 16 15533671 15545912 + MGP_NODShiLtJ_P0043204 Klhl22 protein_coding protein_coding MGP_NODShiLtJ_T0043205.1 MGP_NODShiLtJ_G0022419.1 mouse_genomes_project 16 15533696 15553183 + Klhl22 protein_coding retained_intron MGP_NODShiLtJ_T0043206.1 MGP_NODShiLtJ_G0022419.1 mouse_genomes_project 16 15533704 15570474 + MGP_NODShiLtJ_P0043206 Klhl22 protein_coding protein_coding MGP_NODShiLtJ_T0043207.1 MGP_NODShiLtJ_G0022419.1 mouse_genomes_project 16 15534388 15545863 + MGP_NODShiLtJ_P0043207 Klhl22 protein_coding protein_coding MGP_NODShiLtJ_T0043208.1 MGP_NODShiLtJ_G0022419.1 mouse_genomes_project 16 15536824 15570476 + MGP_NODShiLtJ_P0043208 Klhl22 protein_coding protein_coding MGP_NODShiLtJ_T0043209.1 MGP_NODShiLtJ_G0022419.1 mouse_genomes_project 16 15538117 15545887 + Klhl22 protein_coding retained_intron MGP_NODShiLtJ_T0043925.1 MGP_NODShiLtJ_G0022594.1 mouse_genomes_project 16 34725447 34816228 + MGP_NODShiLtJ_P0043925 Hacd2 protein_coding protein_coding MGP_NODShiLtJ_T0097960.1 MGP_NODShiLtJ_G0036372.1 mouse_genomes_project 16 13552374 13552484 - n-R5s31 rRNA rRNA MGP_NODShiLtJ_T0003609.1 MGP_NODShiLtJ_G0003264.1 mouse_genomes_project 16 31495600 31500475 + Gm15729 antisense antisense MGP_NODShiLtJ_T0043358.1 MGP_NODShiLtJ_G0022459.1 mouse_genomes_project 16 17538828 17541375 - MGP_NODShiLtJ_P0043358 Olfr168 protein_coding protein_coding MGP_NODShiLtJ_T0043943.1 MGP_NODShiLtJ_G0022600.1 mouse_genomes_project 16 35537029 35598828 + MGP_NODShiLtJ_P0043943 Hspbap1 protein_coding protein_coding MGP_NODShiLtJ_T0047371.1 MGP_NODShiLtJ_G0023530.1 mouse_genomes_project 17 39549952 39552267 - MGP_NODShiLtJ_P0047371 protein_coding protein_coding MGP_NODShiLtJ_T0013172.1 MGP_NODShiLtJ_G0011280.1 mouse_genomes_project 17 85092591 85094345 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047461.1 MGP_NODShiLtJ_G0023599.1 mouse_genomes_project 17 47691301 47702540 - MGP_NODShiLtJ_P0047461 Ankrd66 protein_coding protein_coding MGP_NODShiLtJ_T0003729.1 MGP_NODShiLtJ_G0003348.1 mouse_genomes_project 17 77232029 77233876 - 2410021H03Rik antisense antisense MGP_NODShiLtJ_T0046107.1 MGP_NODShiLtJ_G0023239.1 mouse_genomes_project 17 28448806 28450964 - MGP_NODShiLtJ_P0046107 AI413582 protein_coding protein_coding MGP_NODShiLtJ_T0046108.1 MGP_NODShiLtJ_G0023239.1 mouse_genomes_project 17 28449002 28450940 - MGP_NODShiLtJ_P0046108 AI413582 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046109.1 MGP_NODShiLtJ_G0023239.1 mouse_genomes_project 17 28449004 28450981 - AI413582 protein_coding retained_intron MGP_NODShiLtJ_T0046110.1 MGP_NODShiLtJ_G0023239.1 mouse_genomes_project 17 28449913 28450899 - AI413582 protein_coding processed_transcript MGP_NODShiLtJ_T0047403.1 MGP_NODShiLtJ_G0023558.1 mouse_genomes_project 17 40437415 40438510 + MGP_NODShiLtJ_P0047403 Olfr127 protein_coding protein_coding MGP_NODShiLtJ_T0048251.1 MGP_NODShiLtJ_G0023847.1 mouse_genomes_project 17 82878568 82935417 + MGP_NODShiLtJ_P0048251 Spast protein_coding protein_coding MGP_NODShiLtJ_T0048252.1 MGP_NODShiLtJ_G0023847.1 mouse_genomes_project 17 82878618 82935418 + MGP_NODShiLtJ_P0048252 Spast protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046228.1 MGP_NODShiLtJ_G0023262.1 mouse_genomes_project 17 29585303 29593219 + MGP_NODShiLtJ_P0046228 Lhfpl5 protein_coding protein_coding MGP_NODShiLtJ_T0048037.1 MGP_NODShiLtJ_G0023777.1 mouse_genomes_project 17 62981381 62983739 + MGP_NODShiLtJ_P0048037 Tnfsf9 protein_coding protein_coding MGP_NODShiLtJ_T0011309.1 MGP_NODShiLtJ_G0009442.1 mouse_genomes_project 17 16728417 16728703 + Gm23837 misc_RNA misc_RNA MGP_NODShiLtJ_T0098993.1 MGP_NODShiLtJ_G0037387.1 mouse_genomes_project 17 34297492 34297656 - Gm23294 snRNA snRNA MGP_NODShiLtJ_T0047308.1 MGP_NODShiLtJ_G0023509.1 mouse_genomes_project 17 39129433 39138584 + MGP_NODShiLtJ_P0047308 Trim10 protein_coding protein_coding MGP_NODShiLtJ_T0006875.1 MGP_NODShiLtJ_G0005653.1 mouse_genomes_project 17 35410883 35413265 - 4931413I07Rik lincRNA lincRNA MGP_NODShiLtJ_T0048023.1 MGP_NODShiLtJ_G0023772.1 mouse_genomes_project 17 62911421 62930140 - MGP_NODShiLtJ_P0048023 Slc25a23 protein_coding protein_coding MGP_NODShiLtJ_T0048024.1 MGP_NODShiLtJ_G0023772.1 mouse_genomes_project 17 62912909 62923075 - MGP_NODShiLtJ_P0048024 Slc25a23 protein_coding protein_coding MGP_NODShiLtJ_T0048025.1 MGP_NODShiLtJ_G0023772.1 mouse_genomes_project 17 62913195 62924078 - MGP_NODShiLtJ_P0048025 Slc25a23 protein_coding protein_coding MGP_NODShiLtJ_T0048026.1 MGP_NODShiLtJ_G0023772.1 mouse_genomes_project 17 62914749 62923831 - MGP_NODShiLtJ_P0048026 Slc25a23 protein_coding protein_coding MGP_NODShiLtJ_T0048027.1 MGP_NODShiLtJ_G0023772.1 mouse_genomes_project 17 62914893 62925635 - MGP_NODShiLtJ_P0048027 Slc25a23 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048028.1 MGP_NODShiLtJ_G0023772.1 mouse_genomes_project 17 62926471 62930096 - Slc25a23 protein_coding retained_intron MGP_NODShiLtJ_T0048487.1 MGP_NODShiLtJ_G0023934.1 mouse_genomes_project 17 99177231 99233456 + MGP_NODShiLtJ_P0048487 Gtf2a1l protein_coding protein_coding MGP_NODShiLtJ_T0048488.1 MGP_NODShiLtJ_G0023934.1 mouse_genomes_project 17 99177267 99209859 + MGP_NODShiLtJ_P0048488 Gtf2a1l protein_coding protein_coding MGP_NODShiLtJ_T0045436.1 MGP_NODShiLtJ_G0023060.1 mouse_genomes_project 17 21983325 21987860 - MGP_NODShiLtJ_P0045436 protein_coding protein_coding MGP_NODShiLtJ_T0046830.1 MGP_NODShiLtJ_G0023403.1 mouse_genomes_project 17 36418488 36425922 + MGP_NODShiLtJ_P0046830 Agpat1 protein_coding protein_coding MGP_NODShiLtJ_T0046831.1 MGP_NODShiLtJ_G0023403.1 mouse_genomes_project 17 36419070 36425620 + MGP_NODShiLtJ_P0046831 Agpat1 protein_coding protein_coding MGP_NODShiLtJ_T0046832.1 MGP_NODShiLtJ_G0023403.1 mouse_genomes_project 17 36420086 36427673 + MGP_NODShiLtJ_P0046832 Agpat1 protein_coding protein_coding MGP_NODShiLtJ_T0046833.1 MGP_NODShiLtJ_G0023403.1 mouse_genomes_project 17 36420086 36426668 + MGP_NODShiLtJ_P0046833 Agpat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046834.1 MGP_NODShiLtJ_G0023403.1 mouse_genomes_project 17 36420198 36427116 + MGP_NODShiLtJ_P0046834 Agpat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046835.1 MGP_NODShiLtJ_G0023403.1 mouse_genomes_project 17 36423239 36427672 + MGP_NODShiLtJ_P0046835 Agpat1 protein_coding protein_coding MGP_NODShiLtJ_T0046836.1 MGP_NODShiLtJ_G0023403.1 mouse_genomes_project 17 36423828 36427642 + MGP_NODShiLtJ_P0046836 Agpat1 protein_coding protein_coding MGP_NODShiLtJ_T0046837.1 MGP_NODShiLtJ_G0023403.1 mouse_genomes_project 17 36424483 36425401 + Agpat1 protein_coding retained_intron MGP_NODShiLtJ_T0047394.1 MGP_NODShiLtJ_G0023549.1 mouse_genomes_project 17 40158268 40219087 + MGP_NODShiLtJ_P0047394 protein_coding protein_coding MGP_NODShiLtJ_T0017406.1 MGP_NODShiLtJ_G0015207.1 mouse_genomes_project 17 13478706 13493822 + Gm28869 processed_transcript processed_transcript MGP_NODShiLtJ_T0003730.1 MGP_NODShiLtJ_G0003349.1 mouse_genomes_project 17 78963837 78965218 + Gm20703 antisense antisense MGP_NODShiLtJ_T0003715.1 MGP_NODShiLtJ_G0003338.1 mouse_genomes_project 17 49915806 49918064 + Gm17080 antisense antisense MGP_NODShiLtJ_T0048480.1 MGP_NODShiLtJ_G0023933.1 mouse_genomes_project 17 99108487 99141174 + MGP_NODShiLtJ_P0048480 Ston1 protein_coding protein_coding MGP_NODShiLtJ_T0048481.1 MGP_NODShiLtJ_G0023933.1 mouse_genomes_project 17 99108499 99151782 + Ston1 protein_coding processed_transcript MGP_NODShiLtJ_T0048482.1 MGP_NODShiLtJ_G0023933.1 mouse_genomes_project 17 99131756 99156184 + MGP_NODShiLtJ_P0048482 Ston1 protein_coding protein_coding MGP_NODShiLtJ_T0048483.1 MGP_NODShiLtJ_G0023933.1 mouse_genomes_project 17 99131756 99152184 + MGP_NODShiLtJ_P0048483 Ston1 protein_coding protein_coding MGP_NODShiLtJ_T0048484.1 MGP_NODShiLtJ_G0023933.1 mouse_genomes_project 17 99131810 99170136 + MGP_NODShiLtJ_P0048484 Ston1 protein_coding protein_coding MGP_NODShiLtJ_T0048485.1 MGP_NODShiLtJ_G0023933.1 mouse_genomes_project 17 99132034 99146459 + Ston1 protein_coding retained_intron MGP_NODShiLtJ_T0048486.1 MGP_NODShiLtJ_G0023933.1 mouse_genomes_project 17 99132565 99146459 + Ston1 protein_coding retained_intron MGP_NODShiLtJ_T0047287.1 MGP_NODShiLtJ_G0023501.1 mouse_genomes_project 17 38689116 38692534 - MGP_NODShiLtJ_P0047287 H2-M10.4 protein_coding protein_coding MGP_NODShiLtJ_T0047288.1 MGP_NODShiLtJ_G0023501.1 mouse_genomes_project 17 38690363 38692529 - MGP_NODShiLtJ_P0047288 H2-M10.4 protein_coding protein_coding MGP_NODShiLtJ_T0013179.1 MGP_NODShiLtJ_G0011287.1 mouse_genomes_project 17 95682292 95682638 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003688.1 MGP_NODShiLtJ_G0003318.1 mouse_genomes_project 17 35592232 35593260 - BC051226 antisense antisense MGP_NODShiLtJ_T0003689.1 MGP_NODShiLtJ_G0003318.1 mouse_genomes_project 17 35592235 35593229 - BC051226 antisense antisense MGP_NODShiLtJ_T0003690.1 MGP_NODShiLtJ_G0003318.1 mouse_genomes_project 17 35592344 35593368 - BC051226 antisense antisense MGP_NODShiLtJ_T0006856.1 MGP_NODShiLtJ_G0005639.1 mouse_genomes_project 17 28038785 28040825 + Gm26724 lincRNA lincRNA MGP_NODShiLtJ_T0045605.1 MGP_NODShiLtJ_G0023116.1 mouse_genomes_project 17 24986114 24998114 + MGP_NODShiLtJ_P0045605 Rnps1 protein_coding protein_coding MGP_NODShiLtJ_T0045606.1 MGP_NODShiLtJ_G0023116.1 mouse_genomes_project 17 24986114 24998114 + MGP_NODShiLtJ_P0045606 Rnps1 protein_coding protein_coding MGP_NODShiLtJ_T0045607.1 MGP_NODShiLtJ_G0023116.1 mouse_genomes_project 17 24986114 24998114 + MGP_NODShiLtJ_P0045607 Rnps1 protein_coding protein_coding MGP_NODShiLtJ_T0011310.1 MGP_NODShiLtJ_G0009443.1 mouse_genomes_project 17 29434787 29435075 + Gm22146 misc_RNA misc_RNA MGP_NODShiLtJ_T0046494.1 MGP_NODShiLtJ_G0023324.1 mouse_genomes_project 17 33975948 34001941 + MGP_NODShiLtJ_P0046494 Cyp4f17 protein_coding protein_coding MGP_NODShiLtJ_T0046886.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36728723 36739637 - Skiv2l protein_coding retained_intron MGP_NODShiLtJ_T0046887.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36728739 36739637 - MGP_NODShiLtJ_P0046887 Skiv2l protein_coding protein_coding MGP_NODShiLtJ_T0046888.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36728744 36739619 - Skiv2l protein_coding retained_intron MGP_NODShiLtJ_T0046889.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36728796 36739625 - Skiv2l protein_coding retained_intron MGP_NODShiLtJ_T0046890.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36730029 36730628 - Skiv2l protein_coding retained_intron MGP_NODShiLtJ_T0046891.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36730101 36732353 - MGP_NODShiLtJ_P0046891 Skiv2l protein_coding protein_coding MGP_NODShiLtJ_T0046892.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36730855 36733937 - Skiv2l protein_coding retained_intron MGP_NODShiLtJ_T0046893.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36734463 36736630 - Skiv2l protein_coding retained_intron MGP_NODShiLtJ_T0046894.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36734540 36736076 - Skiv2l protein_coding retained_intron MGP_NODShiLtJ_T0046895.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36734676 36735468 - Skiv2l protein_coding retained_intron MGP_NODShiLtJ_T0046896.1 MGP_NODShiLtJ_G0023414.1 mouse_genomes_project 17 36735958 36739622 - MGP_NODShiLtJ_P0046896 Skiv2l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006851.1 MGP_NODShiLtJ_G0005634.1 mouse_genomes_project 17 24266100 24269770 + D930048G16Rik lincRNA lincRNA MGP_NODShiLtJ_T0006920.1 MGP_NODShiLtJ_G0005684.1 mouse_genomes_project 17 79018435 79581247 + lincRNA lincRNA MGP_NODShiLtJ_T0101710.1 MGP_NODShiLtJ_G0039879.1 mouse_genomes_project 17 23324232 23324653 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047619.1 MGP_NODShiLtJ_G0023635.1 mouse_genomes_project 17 50723843 50727417 + MGP_NODShiLtJ_P0047619 Dlk2 protein_coding protein_coding MGP_NODShiLtJ_T0047620.1 MGP_NODShiLtJ_G0023635.1 mouse_genomes_project 17 50723843 50729681 + MGP_NODShiLtJ_P0047620 Dlk2 protein_coding protein_coding MGP_NODShiLtJ_T0047621.1 MGP_NODShiLtJ_G0023635.1 mouse_genomes_project 17 50723905 50729607 + MGP_NODShiLtJ_P0047621 Dlk2 protein_coding protein_coding MGP_NODShiLtJ_T0047622.1 MGP_NODShiLtJ_G0023635.1 mouse_genomes_project 17 50724350 50729681 + MGP_NODShiLtJ_P0047622 Dlk2 protein_coding protein_coding MGP_NODShiLtJ_T0047623.1 MGP_NODShiLtJ_G0023635.1 mouse_genomes_project 17 50724505 50729681 + MGP_NODShiLtJ_P0047623 Dlk2 protein_coding protein_coding MGP_NODShiLtJ_T0045111.1 MGP_NODShiLtJ_G0022935.1 mouse_genomes_project 17 2746525 3027236 + MGP_NODShiLtJ_P0045111 Zdhhc14 protein_coding protein_coding MGP_NODShiLtJ_T0046596.1 MGP_NODShiLtJ_G0023356.1 mouse_genomes_project 17 35401313 35409151 - MGP_NODShiLtJ_P0046596 Angptl4 protein_coding protein_coding MGP_NODShiLtJ_T0046597.1 MGP_NODShiLtJ_G0023356.1 mouse_genomes_project 17 35402475 35409119 - MGP_NODShiLtJ_P0046597 Angptl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046598.1 MGP_NODShiLtJ_G0023356.1 mouse_genomes_project 17 35404538 35406042 - Angptl4 protein_coding retained_intron MGP_NODShiLtJ_T0046599.1 MGP_NODShiLtJ_G0023356.1 mouse_genomes_project 17 35404579 35406720 - Angptl4 protein_coding processed_transcript MGP_NODShiLtJ_T0047151.1 MGP_NODShiLtJ_G0023472.1 mouse_genomes_project 17 37831412 37832652 + MGP_NODShiLtJ_P0047151 Ier3 protein_coding protein_coding MGP_NODShiLtJ_T0047409.1 MGP_NODShiLtJ_G0023563.1 mouse_genomes_project 17 40709452 40710393 - MGP_NODShiLtJ_P0047409 Olfr132 protein_coding protein_coding MGP_NODShiLtJ_T0045865.1 MGP_NODShiLtJ_G0023181.1 mouse_genomes_project 17 26402697 26416495 + MGP_NODShiLtJ_P0045865 Mslnl protein_coding protein_coding MGP_NODShiLtJ_T0045866.1 MGP_NODShiLtJ_G0023181.1 mouse_genomes_project 17 26402860 26416245 + MGP_NODShiLtJ_P0045866 Mslnl protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048282.1 MGP_NODShiLtJ_G0023853.1 mouse_genomes_project 17 83636400 84056356 + MGP_NODShiLtJ_P0048282 Ltbp1 protein_coding protein_coding MGP_NODShiLtJ_T0048283.1 MGP_NODShiLtJ_G0023853.1 mouse_genomes_project 17 83637126 83641133 + Ltbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0048284.1 MGP_NODShiLtJ_G0023853.1 mouse_genomes_project 17 83834661 84008449 + MGP_NODShiLtJ_P0048284 Ltbp1 protein_coding protein_coding MGP_NODShiLtJ_T0048285.1 MGP_NODShiLtJ_G0023853.1 mouse_genomes_project 17 83834661 84055925 + MGP_NODShiLtJ_P0048285 Ltbp1 protein_coding protein_coding MGP_NODShiLtJ_T0048286.1 MGP_NODShiLtJ_G0023853.1 mouse_genomes_project 17 83834762 84055915 + MGP_NODShiLtJ_P0048286 Ltbp1 protein_coding protein_coding MGP_NODShiLtJ_T0048287.1 MGP_NODShiLtJ_G0023853.1 mouse_genomes_project 17 83946818 83951178 + Ltbp1 protein_coding retained_intron MGP_NODShiLtJ_T0048288.1 MGP_NODShiLtJ_G0023853.1 mouse_genomes_project 17 84048798 84057101 + Ltbp1 protein_coding retained_intron MGP_NODShiLtJ_T0045411.1 MGP_NODShiLtJ_G0023042.1 mouse_genomes_project 17 20934662 20935622 - MGP_NODShiLtJ_P0045411 Vmn1r233 protein_coding protein_coding MGP_NODShiLtJ_T0047624.1 MGP_NODShiLtJ_G0023636.1 mouse_genomes_project 17 50729630 50755411 - MGP_NODShiLtJ_P0047624 Abcc10 protein_coding protein_coding MGP_NODShiLtJ_T0047625.1 MGP_NODShiLtJ_G0023636.1 mouse_genomes_project 17 50729639 50755364 - MGP_NODShiLtJ_P0047625 Abcc10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047626.1 MGP_NODShiLtJ_G0023636.1 mouse_genomes_project 17 50729642 50755367 - MGP_NODShiLtJ_P0047626 Abcc10 protein_coding protein_coding MGP_NODShiLtJ_T0047627.1 MGP_NODShiLtJ_G0023636.1 mouse_genomes_project 17 50729710 50755320 - MGP_NODShiLtJ_P0047627 Abcc10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047628.1 MGP_NODShiLtJ_G0023636.1 mouse_genomes_project 17 50729830 50753141 - MGP_NODShiLtJ_P0047628 Abcc10 protein_coding protein_coding MGP_NODShiLtJ_T0047629.1 MGP_NODShiLtJ_G0023636.1 mouse_genomes_project 17 50743822 50751009 - MGP_NODShiLtJ_P0047629 Abcc10 protein_coding protein_coding MGP_NODShiLtJ_T0047630.1 MGP_NODShiLtJ_G0023636.1 mouse_genomes_project 17 50750234 50755385 - Abcc10 protein_coding retained_intron MGP_NODShiLtJ_T0047631.1 MGP_NODShiLtJ_G0023636.1 mouse_genomes_project 17 50751933 50755740 - Abcc10 protein_coding processed_transcript MGP_NODShiLtJ_T0000964.1 MGP_NODShiLtJ_G0000890.1 mouse_genomes_project 17 56836301 56839457 - TEC TEC MGP_NODShiLtJ_T0045381.1 MGP_NODShiLtJ_G0023018.1 mouse_genomes_project 17 18135930 20202244 + MGP_NODShiLtJ_P0045381 Vmn2r92 protein_coding protein_coding MGP_NODShiLtJ_T0045551.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24611982 24681279 - MGP_NODShiLtJ_P0045551 Pdpk1 protein_coding protein_coding MGP_NODShiLtJ_T0045552.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24611990 24681372 - MGP_NODShiLtJ_P0045552 Pdpk1 protein_coding protein_coding MGP_NODShiLtJ_T0045553.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24614119 24681389 - MGP_NODShiLtJ_P0045553 Pdpk1 protein_coding protein_coding MGP_NODShiLtJ_T0045554.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24626470 24632060 - Pdpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0045555.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24629865 24694274 - Pdpk1 protein_coding processed_transcript MGP_NODShiLtJ_T0045556.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24641690 24681375 - Pdpk1 protein_coding retained_intron MGP_NODShiLtJ_T0045557.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24644520 24680625 - MGP_NODShiLtJ_P0045557 Pdpk1 protein_coding protein_coding MGP_NODShiLtJ_T0045558.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24644572 24658476 - MGP_NODShiLtJ_P0045558 Pdpk1 protein_coding protein_coding MGP_NODShiLtJ_T0045559.1 MGP_NODShiLtJ_G0023107.1 mouse_genomes_project 17 24648595 24680947 - MGP_NODShiLtJ_P0045559 Pdpk1 protein_coding protein_coding MGP_NODShiLtJ_T0045536.1 MGP_NODShiLtJ_G0023100.1 mouse_genomes_project 17 24460360 24467617 + MGP_NODShiLtJ_P0045536 Sbpl protein_coding protein_coding MGP_NODShiLtJ_T0045537.1 MGP_NODShiLtJ_G0023100.1 mouse_genomes_project 17 24460660 24467346 + MGP_NODShiLtJ_P0045537 Sbpl protein_coding protein_coding MGP_NODShiLtJ_T0045538.1 MGP_NODShiLtJ_G0023100.1 mouse_genomes_project 17 24460752 24467613 + MGP_NODShiLtJ_P0045538 Sbpl protein_coding protein_coding MGP_NODShiLtJ_T0045539.1 MGP_NODShiLtJ_G0023100.1 mouse_genomes_project 17 24461058 24467676 + MGP_NODShiLtJ_P0045539 Sbpl protein_coding protein_coding MGP_NODShiLtJ_T0101695.1 MGP_NODShiLtJ_G0039864.1 mouse_genomes_project 17 19713762 19714693 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047750.1 MGP_NODShiLtJ_G0023678.1 mouse_genomes_project 17 52263918 52266874 - MGP_NODShiLtJ_P0047750 protein_coding protein_coding MGP_NODShiLtJ_T0047751.1 MGP_NODShiLtJ_G0023678.1 mouse_genomes_project 17 52263918 52267864 - MGP_NODShiLtJ_P0047751 protein_coding protein_coding MGP_NODShiLtJ_T0047752.1 MGP_NODShiLtJ_G0023678.1 mouse_genomes_project 17 52264020 52266294 - protein_coding retained_intron MGP_NODShiLtJ_T0047754.1 MGP_NODShiLtJ_G0023678.1 mouse_genomes_project 17 52264979 52266801 - MGP_NODShiLtJ_P0047754 protein_coding protein_coding MGP_NODShiLtJ_T0047755.1 MGP_NODShiLtJ_G0023678.1 mouse_genomes_project 17 52267613 52270141 - protein_coding retained_intron MGP_NODShiLtJ_T0045400.1 MGP_NODShiLtJ_G0023037.1 mouse_genomes_project 17 20757888 20758809 + MGP_NODShiLtJ_P0045400 Vmn1r229 protein_coding protein_coding MGP_NODShiLtJ_T0045108.1 MGP_NODShiLtJ_G0022934.1 mouse_genomes_project 17 2661249 2662688 - MGP_NODShiLtJ_P0045108 Ldhal6b protein_coding protein_coding MGP_NODShiLtJ_T0006844.1 MGP_NODShiLtJ_G0005629.1 mouse_genomes_project 17 21508649 21512348 - Gm26753 lincRNA lincRNA MGP_NODShiLtJ_T0046864.1 MGP_NODShiLtJ_G0023410.1 mouse_genomes_project 17 36520115 36521000 - protein_coding retained_intron MGP_NODShiLtJ_T0046865.1 MGP_NODShiLtJ_G0023410.1 mouse_genomes_project 17 36520221 36521787 - MGP_NODShiLtJ_P0046865 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045155.1 MGP_NODShiLtJ_G0022950.1 mouse_genomes_project 17 5380993 5449075 - MGP_NODShiLtJ_P0045155 Fndc1 protein_coding protein_coding MGP_NODShiLtJ_T0045156.1 MGP_NODShiLtJ_G0022950.1 mouse_genomes_project 17 5389912 5404252 - Fndc1 protein_coding processed_transcript MGP_NODShiLtJ_T0045157.1 MGP_NODShiLtJ_G0022950.1 mouse_genomes_project 17 5404534 5410779 - Fndc1 protein_coding retained_intron MGP_NODShiLtJ_T0045158.1 MGP_NODShiLtJ_G0022950.1 mouse_genomes_project 17 5425572 5473355 - MGP_NODShiLtJ_P0045158 Fndc1 protein_coding protein_coding MGP_NODShiLtJ_T0045159.1 MGP_NODShiLtJ_G0022950.1 mouse_genomes_project 17 5444965 5473355 - MGP_NODShiLtJ_P0045159 Fndc1 protein_coding protein_coding MGP_NODShiLtJ_T0046381.1 MGP_NODShiLtJ_G0023302.1 mouse_genomes_project 17 32509680 32548142 + MGP_NODShiLtJ_P0046381 Ubash3a protein_coding protein_coding MGP_NODShiLtJ_T0046382.1 MGP_NODShiLtJ_G0023302.1 mouse_genomes_project 17 32509887 32519692 + MGP_NODShiLtJ_P0046382 Ubash3a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046383.1 MGP_NODShiLtJ_G0023302.1 mouse_genomes_project 17 32509896 32517399 + MGP_NODShiLtJ_P0046383 Ubash3a protein_coding protein_coding MGP_NODShiLtJ_T0046384.1 MGP_NODShiLtJ_G0023302.1 mouse_genomes_project 17 32515614 32548142 + Ubash3a protein_coding processed_transcript MGP_NODShiLtJ_T0046385.1 MGP_NODShiLtJ_G0023302.1 mouse_genomes_project 17 32515787 32521443 + Ubash3a protein_coding processed_transcript MGP_NODShiLtJ_T0045528.1 MGP_NODShiLtJ_G0023095.1 mouse_genomes_project 17 24324002 24335086 + Prss32 protein_coding processed_transcript MGP_NODShiLtJ_T0045529.1 MGP_NODShiLtJ_G0023095.1 mouse_genomes_project 17 24334165 24340315 + MGP_NODShiLtJ_P0045529 Prss32 protein_coding protein_coding MGP_NODShiLtJ_T0045530.1 MGP_NODShiLtJ_G0023095.1 mouse_genomes_project 17 24334408 24339887 + MGP_NODShiLtJ_P0045530 Prss32 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0003734.1 MGP_NODShiLtJ_G0003353.1 mouse_genomes_project 17 96551236 96553254 - 2010106C02Rik antisense antisense MGP_NODShiLtJ_T0047777.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52406203 52424656 - MGP_NODShiLtJ_P0047777 Mdfi protein_coding protein_coding MGP_NODShiLtJ_T0047778.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52406203 52426091 - MGP_NODShiLtJ_P0047778 Mdfi protein_coding protein_coding MGP_NODShiLtJ_T0047779.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52406211 52424706 - MGP_NODShiLtJ_P0047779 Mdfi protein_coding protein_coding MGP_NODShiLtJ_T0047780.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52406821 52424673 - Mdfi protein_coding processed_transcript MGP_NODShiLtJ_T0047781.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52406939 52424584 - MGP_NODShiLtJ_P0047781 Mdfi protein_coding protein_coding MGP_NODShiLtJ_T0047782.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52410728 52424676 - Mdfi protein_coding retained_intron MGP_NODShiLtJ_T0047783.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52411767 52424687 - MGP_NODShiLtJ_P0047783 Mdfi protein_coding protein_coding MGP_NODShiLtJ_T0047784.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52411856 52424660 - MGP_NODShiLtJ_P0047784 Mdfi protein_coding protein_coding MGP_NODShiLtJ_T0047785.1 MGP_NODShiLtJ_G0023682.1 mouse_genomes_project 17 52416015 52424645 - MGP_NODShiLtJ_P0047785 Mdfi protein_coding protein_coding MGP_NODShiLtJ_T0046365.1 MGP_NODShiLtJ_G0023291.1 mouse_genomes_project 17 31198372 31417091 + MGP_NODShiLtJ_P0046365 protein_coding protein_coding MGP_NODShiLtJ_T0097782.1 MGP_NODShiLtJ_G0036194.1 mouse_genomes_project 17 90371728 90372120 + pseudogene pseudogene MGP_NODShiLtJ_T0098996.1 MGP_NODShiLtJ_G0037390.1 mouse_genomes_project 17 36967389 36967493 + Gm23421 snRNA snRNA MGP_NODShiLtJ_T0045151.1 MGP_NODShiLtJ_G0022946.1 mouse_genomes_project 17 4620639 4693322 + MGP_NODShiLtJ_P0045151 Gm1604b protein_coding protein_coding MGP_NODShiLtJ_T0047292.1 MGP_NODShiLtJ_G0023504.1 mouse_genomes_project 17 38910988 38913201 - MGP_NODShiLtJ_P0047292 H2-M1 protein_coding protein_coding MGP_NODShiLtJ_T0006870.1 MGP_NODShiLtJ_G0005649.1 mouse_genomes_project 17 32912719 32914704 + 4833413E03Rik lincRNA lincRNA MGP_NODShiLtJ_T0006871.1 MGP_NODShiLtJ_G0005649.1 mouse_genomes_project 17 32913785 32914707 + 4833413E03Rik lincRNA lincRNA MGP_NODShiLtJ_T0101699.1 MGP_NODShiLtJ_G0039868.1 mouse_genomes_project 17 20282008 20282612 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047014.1 MGP_NODShiLtJ_G0023439.1 mouse_genomes_project 17 37030290 37034025 + MGP_NODShiLtJ_P0047014 Ly6g5c protein_coding protein_coding MGP_NODShiLtJ_T0010116.1 MGP_NODShiLtJ_G0008249.1 mouse_genomes_project 17 50655393 50655482 + Mir693 miRNA miRNA MGP_NODShiLtJ_T0100255.1 MGP_NODShiLtJ_G0038649.1 mouse_genomes_project 17 37178921 37178998 + Gm22589 snoRNA snoRNA MGP_NODShiLtJ_T0097977.1 MGP_NODShiLtJ_G0036389.1 mouse_genomes_project 17 87966882 87966993 - Gm22562 rRNA rRNA MGP_NODShiLtJ_T0006936.1 MGP_NODShiLtJ_G0005697.1 mouse_genomes_project 17 106799490 106903323 - lincRNA lincRNA MGP_NODShiLtJ_T0006937.1 MGP_NODShiLtJ_G0005697.1 mouse_genomes_project 17 106800796 106804088 - lincRNA lincRNA MGP_NODShiLtJ_T0047999.1 MGP_NODShiLtJ_G0023755.1 mouse_genomes_project 17 62504846 62544901 + MGP_NODShiLtJ_P0047999 Ranbp3 protein_coding protein_coding MGP_NODShiLtJ_T0047936.1 MGP_NODShiLtJ_G0023734.1 mouse_genomes_project 17 61882874 61892160 - MGP_NODShiLtJ_P0047936 Plin4 protein_coding protein_coding MGP_NODShiLtJ_T0099021.1 MGP_NODShiLtJ_G0037415.1 mouse_genomes_project 17 104880600 104880707 - Gm25935 snRNA snRNA MGP_NODShiLtJ_T0048372.1 MGP_NODShiLtJ_G0023895.1 mouse_genomes_project 17 93603657 93685377 - MGP_NODShiLtJ_P0048372 Kcng3 protein_coding protein_coding MGP_NODShiLtJ_T0006854.1 MGP_NODShiLtJ_G0005637.1 mouse_genomes_project 17 27627538 27655486 - Gm17382 lincRNA lincRNA MGP_NODShiLtJ_T0047329.1 MGP_NODShiLtJ_G0023517.1 mouse_genomes_project 17 39248552 39254735 - MGP_NODShiLtJ_P0047329 H2-M5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047330.1 MGP_NODShiLtJ_G0023517.1 mouse_genomes_project 17 39248552 39254945 - MGP_NODShiLtJ_P0047330 H2-M5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047331.1 MGP_NODShiLtJ_G0023517.1 mouse_genomes_project 17 39248836 39255309 - H2-M5 protein_coding retained_intron MGP_NODShiLtJ_T0047332.1 MGP_NODShiLtJ_G0023517.1 mouse_genomes_project 17 39252627 39255276 - MGP_NODShiLtJ_P0047332 H2-M5 protein_coding protein_coding MGP_NODShiLtJ_T0047333.1 MGP_NODShiLtJ_G0023517.1 mouse_genomes_project 17 39252887 39254961 - MGP_NODShiLtJ_P0047333 H2-M5 protein_coding protein_coding MGP_NODShiLtJ_T0047334.1 MGP_NODShiLtJ_G0023517.1 mouse_genomes_project 17 39252887 39254961 - MGP_NODShiLtJ_P0047334 H2-M5 protein_coding protein_coding MGP_NODShiLtJ_T0047335.1 MGP_NODShiLtJ_G0023517.1 mouse_genomes_project 17 39253269 39254818 - MGP_NODShiLtJ_P0047335 H2-M5 protein_coding protein_coding MGP_NODShiLtJ_T0010088.1 MGP_NODShiLtJ_G0008221.1 mouse_genomes_project 17 27326404 27326530 - Gm22420 miRNA miRNA MGP_NODShiLtJ_T0047600.1 MGP_NODShiLtJ_G0023631.1 mouse_genomes_project 17 50669134 50673276 - MGP_NODShiLtJ_P0047600 Polr1c protein_coding protein_coding MGP_NODShiLtJ_T0047601.1 MGP_NODShiLtJ_G0023631.1 mouse_genomes_project 17 50669321 50671785 - MGP_NODShiLtJ_P0047601 Polr1c protein_coding protein_coding MGP_NODShiLtJ_T0047602.1 MGP_NODShiLtJ_G0023631.1 mouse_genomes_project 17 50669744 50673154 - Polr1c protein_coding retained_intron MGP_NODShiLtJ_T0047603.1 MGP_NODShiLtJ_G0023631.1 mouse_genomes_project 17 50669833 50673190 - MGP_NODShiLtJ_P0047603 Polr1c protein_coding protein_coding MGP_NODShiLtJ_T0047604.1 MGP_NODShiLtJ_G0023631.1 mouse_genomes_project 17 50670055 50673190 - MGP_NODShiLtJ_P0047604 Polr1c protein_coding protein_coding MGP_NODShiLtJ_T0047605.1 MGP_NODShiLtJ_G0023631.1 mouse_genomes_project 17 50670153 50673190 - MGP_NODShiLtJ_P0047605 Polr1c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047606.1 MGP_NODShiLtJ_G0023631.1 mouse_genomes_project 17 50670482 50673189 - Polr1c protein_coding retained_intron MGP_NODShiLtJ_T0047607.1 MGP_NODShiLtJ_G0023631.1 mouse_genomes_project 17 50672513 50673190 - Polr1c protein_coding retained_intron MGP_NODShiLtJ_T0046537.1 MGP_NODShiLtJ_G0023340.1 mouse_genomes_project 17 34662522 34666615 - MGP_NODShiLtJ_P0046537 Morc2b protein_coding protein_coding MGP_NODShiLtJ_T0046538.1 MGP_NODShiLtJ_G0023340.1 mouse_genomes_project 17 34662577 34666431 - MGP_NODShiLtJ_P0046538 Morc2b protein_coding protein_coding MGP_NODShiLtJ_T0045855.1 MGP_NODShiLtJ_G0023178.1 mouse_genomes_project 17 26382954 26385190 + MGP_NODShiLtJ_P0045855 Gng13 protein_coding protein_coding MGP_NODShiLtJ_T0045856.1 MGP_NODShiLtJ_G0023178.1 mouse_genomes_project 17 26383311 26384871 + MGP_NODShiLtJ_P0045856 Gng13 protein_coding protein_coding MGP_NODShiLtJ_T0045107.1 MGP_NODShiLtJ_G0022933.1 mouse_genomes_project 17 2654793 2683687 - MGP_NODShiLtJ_P0045107 Tmem242 protein_coding protein_coding MGP_NODShiLtJ_T0045109.1 MGP_NODShiLtJ_G0022933.1 mouse_genomes_project 17 2675701 2683703 - MGP_NODShiLtJ_P0045109 Tmem242 protein_coding protein_coding MGP_NODShiLtJ_T0045110.1 MGP_NODShiLtJ_G0022933.1 mouse_genomes_project 17 2676431 2683700 - MGP_NODShiLtJ_P0045110 Tmem242 protein_coding protein_coding MGP_NODShiLtJ_T0047911.1 MGP_NODShiLtJ_G0023725.1 mouse_genomes_project 17 61725935 61737535 + MGP_NODShiLtJ_P0047911 Ccdc94 protein_coding protein_coding MGP_NODShiLtJ_T0003733.1 MGP_NODShiLtJ_G0003352.1 mouse_genomes_project 17 95814607 95816253 - Gm28528 antisense antisense MGP_NODShiLtJ_T0047006.1 MGP_NODShiLtJ_G0023437.1 mouse_genomes_project 17 37002709 37007723 - MGP_NODShiLtJ_P0047006 Ly6g6f protein_coding protein_coding MGP_NODShiLtJ_T0046159.1 MGP_NODShiLtJ_G0023250.1 mouse_genomes_project 17 29085852 29119227 + MGP_NODShiLtJ_P0046159 Scube3 protein_coding protein_coding MGP_NODShiLtJ_T0046160.1 MGP_NODShiLtJ_G0023250.1 mouse_genomes_project 17 29096509 29115889 + Scube3 protein_coding processed_transcript MGP_NODShiLtJ_T0046161.1 MGP_NODShiLtJ_G0023250.1 mouse_genomes_project 17 29097958 29114520 + MGP_NODShiLtJ_P0046161 Scube3 protein_coding protein_coding MGP_NODShiLtJ_T0046162.1 MGP_NODShiLtJ_G0023250.1 mouse_genomes_project 17 29105133 29117402 + Scube3 protein_coding processed_transcript MGP_NODShiLtJ_T0046163.1 MGP_NODShiLtJ_G0023250.1 mouse_genomes_project 17 29110183 29112023 + Scube3 protein_coding retained_intron MGP_NODShiLtJ_T0006863.1 MGP_NODShiLtJ_G0005645.1 mouse_genomes_project 17 30106827 30107925 + Gm16195 lincRNA lincRNA MGP_NODShiLtJ_T0046378.1 MGP_NODShiLtJ_G0023300.1 mouse_genomes_project 17 32454837 32458490 - MGP_NODShiLtJ_P0046378 Tff1 protein_coding protein_coding MGP_NODShiLtJ_T0100249.1 MGP_NODShiLtJ_G0038643.1 mouse_genomes_project 17 25944771 25944908 + Gm25921 snoRNA snoRNA MGP_NODShiLtJ_T0047914.1 MGP_NODShiLtJ_G0023727.1 mouse_genomes_project 17 61757729 61768076 + MGP_NODShiLtJ_P0047914 Fsd1 protein_coding protein_coding MGP_NODShiLtJ_T0047392.1 MGP_NODShiLtJ_G0023547.1 mouse_genomes_project 17 40103190 40106357 - MGP_NODShiLtJ_P0047392 protein_coding protein_coding MGP_NODShiLtJ_T0045270.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 11383137 11833941 - Tcte2 protein_coding processed_transcript MGP_NODShiLtJ_T0045271.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 11385157 12080270 - Tcte2 protein_coding processed_transcript MGP_NODShiLtJ_T0045272.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 11385157 11966993 - Tcte2 protein_coding processed_transcript MGP_NODShiLtJ_T0045275.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 12019575 12080270 - MGP_NODShiLtJ_P0045275 Tcte2 protein_coding protein_coding MGP_NODShiLtJ_T0045276.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 12019581 12080294 - MGP_NODShiLtJ_P0045276 Tcte2 protein_coding protein_coding MGP_NODShiLtJ_T0045277.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 12021162 12080259 - MGP_NODShiLtJ_P0045277 Tcte2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045278.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 12021180 12041008 - MGP_NODShiLtJ_P0045278 Tcte2 protein_coding protein_coding MGP_NODShiLtJ_T0045279.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 12023567 12080493 - MGP_NODShiLtJ_P0045279 Tcte2 protein_coding protein_coding MGP_NODShiLtJ_T0045280.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 12023567 12080717 - MGP_NODShiLtJ_P0045280 Tcte2 protein_coding protein_coding MGP_NODShiLtJ_T0045281.1 MGP_NODShiLtJ_G0022984.1 mouse_genomes_project 17 12023567 12080278 - MGP_NODShiLtJ_P0045281 Tcte2 protein_coding protein_coding MGP_NODShiLtJ_T0045370.1 MGP_NODShiLtJ_G0023010.1 mouse_genomes_project 17 16831221 16838634 - MGP_NODShiLtJ_P0045370 Fpr1 protein_coding protein_coding MGP_NODShiLtJ_T0047089.1 MGP_NODShiLtJ_G0023460.1 mouse_genomes_project 17 37489529 37495285 + MGP_NODShiLtJ_P0047089 Pou5f1 protein_coding protein_coding MGP_NODShiLtJ_T0047090.1 MGP_NODShiLtJ_G0023460.1 mouse_genomes_project 17 37490997 37493441 + MGP_NODShiLtJ_P0047090 Pou5f1 protein_coding protein_coding MGP_NODShiLtJ_T0047091.1 MGP_NODShiLtJ_G0023460.1 mouse_genomes_project 17 37492114 37493441 + MGP_NODShiLtJ_P0047091 Pou5f1 protein_coding protein_coding MGP_NODShiLtJ_T0047092.1 MGP_NODShiLtJ_G0023460.1 mouse_genomes_project 17 37492116 37493441 + MGP_NODShiLtJ_P0047092 Pou5f1 protein_coding protein_coding MGP_NODShiLtJ_T0047093.1 MGP_NODShiLtJ_G0023460.1 mouse_genomes_project 17 37492126 37493441 + MGP_NODShiLtJ_P0047093 Pou5f1 protein_coding protein_coding MGP_NODShiLtJ_T0047094.1 MGP_NODShiLtJ_G0023460.1 mouse_genomes_project 17 37492130 37493441 + MGP_NODShiLtJ_P0047094 Pou5f1 protein_coding protein_coding MGP_NODShiLtJ_T0047454.1 MGP_NODShiLtJ_G0023596.1 mouse_genomes_project 17 47389396 47455706 + MGP_NODShiLtJ_P0047454 Adgrf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046369.1 MGP_NODShiLtJ_G0023294.1 mouse_genomes_project 17 31853372 32131768 + MGP_NODShiLtJ_P0046369 Dnah8 protein_coding protein_coding MGP_NODShiLtJ_T0045615.1 MGP_NODShiLtJ_G0023119.1 mouse_genomes_project 17 25019299 25031803 - MGP_NODShiLtJ_P0045615 E4f1 protein_coding protein_coding MGP_NODShiLtJ_T0045616.1 MGP_NODShiLtJ_G0023119.1 mouse_genomes_project 17 25019464 25031768 - MGP_NODShiLtJ_P0045616 E4f1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098999.1 MGP_NODShiLtJ_G0037393.1 mouse_genomes_project 17 44579883 44580031 - Gm23078 snRNA snRNA MGP_NODShiLtJ_T0047676.1 MGP_NODShiLtJ_G0023651.1 mouse_genomes_project 17 51148675 51151203 + MGP_NODShiLtJ_P0047676 Mea1 protein_coding protein_coding MGP_NODShiLtJ_T0048039.1 MGP_NODShiLtJ_G0023779.1 mouse_genomes_project 17 63075541 63080239 - MGP_NODShiLtJ_P0048039 Tnfsf14 protein_coding protein_coding MGP_NODShiLtJ_T0101762.1 MGP_NODShiLtJ_G0039930.1 mouse_genomes_project 17 39749664 39750033 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013107.1 MGP_NODShiLtJ_G0011215.1 mouse_genomes_project 17 28397952 28398221 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047418.1 MGP_NODShiLtJ_G0023569.1 mouse_genomes_project 17 40986550 40987489 + MGP_NODShiLtJ_P0047418 Olfr136 protein_coding protein_coding MGP_NODShiLtJ_T0048248.1 MGP_NODShiLtJ_G0023844.1 mouse_genomes_project 17 82477095 82509457 - MGP_NODShiLtJ_P0048248 Srd5a2 protein_coding protein_coding MGP_NODShiLtJ_T0010133.1 MGP_NODShiLtJ_G0008266.1 mouse_genomes_project 17 102924921 102925056 + Gm44345 miRNA miRNA MGP_NODShiLtJ_T0097780.1 MGP_NODShiLtJ_G0036192.1 mouse_genomes_project 17 40036906 40037871 - pseudogene pseudogene MGP_NODShiLtJ_T0047305.1 MGP_NODShiLtJ_G0023508.1 mouse_genomes_project 17 39120570 39127063 - MGP_NODShiLtJ_P0047305 Trim15 protein_coding protein_coding MGP_NODShiLtJ_T0047306.1 MGP_NODShiLtJ_G0023508.1 mouse_genomes_project 17 39120572 39127086 - MGP_NODShiLtJ_P0047306 Trim15 protein_coding protein_coding MGP_NODShiLtJ_T0047307.1 MGP_NODShiLtJ_G0023508.1 mouse_genomes_project 17 39121193 39126622 - MGP_NODShiLtJ_P0047307 Trim15 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045839.1 MGP_NODShiLtJ_G0023174.1 mouse_genomes_project 17 26128254 26133257 + MGP_NODShiLtJ_P0045839 Tekt4 protein_coding protein_coding MGP_NODShiLtJ_T0100248.1 MGP_NODShiLtJ_G0038642.1 mouse_genomes_project 17 25331813 25331947 + Snora64 snoRNA snoRNA MGP_NODShiLtJ_T0011332.1 MGP_NODShiLtJ_G0009465.1 mouse_genomes_project 17 95814506 95814699 + Gm27427 misc_RNA misc_RNA MGP_NODShiLtJ_T0010132.1 MGP_NODShiLtJ_G0008265.1 mouse_genomes_project 17 101939048 101939109 + Gm27475 miRNA miRNA MGP_NODShiLtJ_T0046089.1 MGP_NODShiLtJ_G0023233.1 mouse_genomes_project 17 27959301 27970556 - MGP_NODShiLtJ_P0046089 Uqcc2 protein_coding protein_coding MGP_NODShiLtJ_T0046090.1 MGP_NODShiLtJ_G0023233.1 mouse_genomes_project 17 27959306 27970264 - Uqcc2 protein_coding processed_transcript MGP_NODShiLtJ_T0046091.1 MGP_NODShiLtJ_G0023233.1 mouse_genomes_project 17 27959308 27970543 - MGP_NODShiLtJ_P0046091 Uqcc2 protein_coding protein_coding MGP_NODShiLtJ_T0046092.1 MGP_NODShiLtJ_G0023233.1 mouse_genomes_project 17 27959308 27970270 - MGP_NODShiLtJ_P0046092 Uqcc2 protein_coding protein_coding MGP_NODShiLtJ_T0010077.1 MGP_NODShiLtJ_G0008210.1 mouse_genomes_project 17 16776362 16776455 + Mirlet7e miRNA miRNA MGP_NODShiLtJ_T0011313.1 MGP_NODShiLtJ_G0009446.1 mouse_genomes_project 17 34466606 34466881 - Gm25667 misc_RNA misc_RNA MGP_NODShiLtJ_T0045772.1 MGP_NODShiLtJ_G0023157.1 mouse_genomes_project 17 25748253 25752770 + MGP_NODShiLtJ_P0045772 Ptx4 protein_coding protein_coding MGP_NODShiLtJ_T0047084.1 MGP_NODShiLtJ_G0023456.1 mouse_genomes_project 17 37198905 37205360 + MGP_NODShiLtJ_P0047084 H2-D1 protein_coding protein_coding MGP_NODShiLtJ_T0045209.1 MGP_NODShiLtJ_G0022965.1 mouse_genomes_project 17 8056417 8203017 - MGP_NODShiLtJ_P0045209 Qk protein_coding protein_coding MGP_NODShiLtJ_T0045210.1 MGP_NODShiLtJ_G0022965.1 mouse_genomes_project 17 8061157 8203017 - MGP_NODShiLtJ_P0045210 Qk protein_coding protein_coding MGP_NODShiLtJ_T0046688.1 MGP_NODShiLtJ_G0023373.1 mouse_genomes_project 17 35736324 35740229 - MGP_NODShiLtJ_P0046688 Ring1 protein_coding protein_coding MGP_NODShiLtJ_T0046689.1 MGP_NODShiLtJ_G0023373.1 mouse_genomes_project 17 35736638 35739485 - Ring1 protein_coding retained_intron MGP_NODShiLtJ_T0046690.1 MGP_NODShiLtJ_G0023373.1 mouse_genomes_project 17 35739739 35740201 - Ring1 protein_coding retained_intron MGP_NODShiLtJ_T0003705.1 MGP_NODShiLtJ_G0003331.1 mouse_genomes_project 17 38088460 38095416 + antisense antisense MGP_NODShiLtJ_T0013109.1 MGP_NODShiLtJ_G0011217.1 mouse_genomes_project 17 28406083 28406426 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006846.1 MGP_NODShiLtJ_G0005631.1 mouse_genomes_project 17 23072493 23110738 - Gm16386 lincRNA lincRNA MGP_NODShiLtJ_T0011311.1 MGP_NODShiLtJ_G0009444.1 mouse_genomes_project 17 30153860 30154032 + Gm27599 misc_RNA misc_RNA MGP_NODShiLtJ_T0013102.1 MGP_NODShiLtJ_G0011210.1 mouse_genomes_project 17 23955368 23955688 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003677.1 MGP_NODShiLtJ_G0003311.1 mouse_genomes_project 17 29915804 29920166 - Pnpla1os antisense antisense MGP_NODShiLtJ_T0047068.1 MGP_NODShiLtJ_G0023451.1 mouse_genomes_project 17 37138472 37140625 - MGP_NODShiLtJ_P0047068 Lta protein_coding protein_coding MGP_NODShiLtJ_T0047398.1 MGP_NODShiLtJ_G0023553.1 mouse_genomes_project 17 40324291 40325232 + MGP_NODShiLtJ_P0047398 Olfr123 protein_coding protein_coding MGP_NODShiLtJ_T0045480.1 MGP_NODShiLtJ_G0023079.1 mouse_genomes_project 17 24130651 24138537 + MGP_NODShiLtJ_P0045480 Ccdc64b protein_coding protein_coding MGP_NODShiLtJ_T0047472.1 MGP_NODShiLtJ_G0023602.1 mouse_genomes_project 17 47809398 47835393 - MGP_NODShiLtJ_P0047472 Slc25a27 protein_coding protein_coding MGP_NODShiLtJ_T0047427.1 MGP_NODShiLtJ_G0023578.1 mouse_genomes_project 17 44107723 44130450 + MGP_NODShiLtJ_P0047427 Esp8 protein_coding protein_coding MGP_NODShiLtJ_T0006914.1 MGP_NODShiLtJ_G0005680.1 mouse_genomes_project 17 77380010 77404119 - A930029G22Rik lincRNA lincRNA MGP_NODShiLtJ_T0097970.1 MGP_NODShiLtJ_G0036382.1 mouse_genomes_project 17 32340624 32340752 + Gm25447 rRNA rRNA MGP_NODShiLtJ_T0046061.1 MGP_NODShiLtJ_G0023225.1 mouse_genomes_project 17 27603524 27606424 - MGP_NODShiLtJ_P0046061 Nkx2-5 protein_coding protein_coding MGP_NODShiLtJ_T0047366.1 MGP_NODShiLtJ_G0023525.1 mouse_genomes_project 17 39506524 39508728 + MGP_NODShiLtJ_P0047366 Ubd protein_coding protein_coding MGP_NODShiLtJ_T0098991.1 MGP_NODShiLtJ_G0037385.1 mouse_genomes_project 17 31521647 31521720 + Gm25049 snRNA snRNA MGP_NODShiLtJ_T0046943.1 MGP_NODShiLtJ_G0023424.1 mouse_genomes_project 17 36882154 36882682 + MGP_NODShiLtJ_P0046943 Gm20481 protein_coding protein_coding MGP_NODShiLtJ_T0047684.1 MGP_NODShiLtJ_G0023655.1 mouse_genomes_project 17 51208035 51225633 - MGP_NODShiLtJ_P0047684 Cnpy3 protein_coding protein_coding MGP_NODShiLtJ_T0047685.1 MGP_NODShiLtJ_G0023655.1 mouse_genomes_project 17 51208086 51225616 - MGP_NODShiLtJ_P0047685 Cnpy3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047686.1 MGP_NODShiLtJ_G0023655.1 mouse_genomes_project 17 51208977 51209999 - Cnpy3 protein_coding retained_intron MGP_NODShiLtJ_T0047687.1 MGP_NODShiLtJ_G0023655.1 mouse_genomes_project 17 51218672 51225614 - MGP_NODShiLtJ_P0047687 Cnpy3 protein_coding protein_coding MGP_NODShiLtJ_T0047688.1 MGP_NODShiLtJ_G0023655.1 mouse_genomes_project 17 51218905 51225596 - Cnpy3 protein_coding retained_intron MGP_NODShiLtJ_T0006882.1 MGP_NODShiLtJ_G0005660.1 mouse_genomes_project 17 37089687 37091755 + Gm17705 lincRNA lincRNA MGP_NODShiLtJ_T0047574.1 MGP_NODShiLtJ_G0023626.1 mouse_genomes_project 17 50518100 50532767 - MGP_NODShiLtJ_P0047574 Rsph9 protein_coding protein_coding MGP_NODShiLtJ_T0047578.1 MGP_NODShiLtJ_G0023626.1 mouse_genomes_project 17 50525311 50541102 - MGP_NODShiLtJ_P0047578 Rsph9 protein_coding protein_coding MGP_NODShiLtJ_T0047579.1 MGP_NODShiLtJ_G0023626.1 mouse_genomes_project 17 50530446 50532732 - Rsph9 protein_coding retained_intron MGP_NODShiLtJ_T0097974.1 MGP_NODShiLtJ_G0036386.1 mouse_genomes_project 17 52440238 52440357 + n-R5s28 rRNA rRNA MGP_NODShiLtJ_T0046806.1 MGP_NODShiLtJ_G0023399.1 mouse_genomes_project 17 36403114 36405063 + MGP_NODShiLtJ_P0046806 Gpsm3 protein_coding protein_coding MGP_NODShiLtJ_T0046807.1 MGP_NODShiLtJ_G0023399.1 mouse_genomes_project 17 36403400 36405063 + MGP_NODShiLtJ_P0046807 Gpsm3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046808.1 MGP_NODShiLtJ_G0023399.1 mouse_genomes_project 17 36403539 36404949 + MGP_NODShiLtJ_P0046808 Gpsm3 protein_coding protein_coding MGP_NODShiLtJ_T0010127.1 MGP_NODShiLtJ_G0008260.1 mouse_genomes_project 17 74801887 74801976 - Mir5709 miRNA miRNA MGP_NODShiLtJ_T0100273.1 MGP_NODShiLtJ_G0038667.1 mouse_genomes_project 17 102866924 102867054 - Gm24244 snoRNA snoRNA MGP_NODShiLtJ_T0048056.1 MGP_NODShiLtJ_G0023787.1 mouse_genomes_project 17 63673077 64365612 + MGP_NODShiLtJ_P0048056 Cntnap5c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048057.1 MGP_NODShiLtJ_G0023787.1 mouse_genomes_project 17 63673077 64365612 + MGP_NODShiLtJ_P0048057 Cntnap5c protein_coding protein_coding MGP_NODShiLtJ_T0045412.1 MGP_NODShiLtJ_G0023043.1 mouse_genomes_project 17 20951458 20971594 + MGP_NODShiLtJ_P0045412 Zfp160 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0098992.1 MGP_NODShiLtJ_G0037386.1 mouse_genomes_project 17 32022473 32022577 - Gm24661 snRNA snRNA MGP_NODShiLtJ_T0045661.1 MGP_NODShiLtJ_G0023130.1 mouse_genomes_project 17 25259021 25260158 - MGP_NODShiLtJ_P0045661 Npw protein_coding protein_coding MGP_NODShiLtJ_T0048325.1 MGP_NODShiLtJ_G0023869.1 mouse_genomes_project 17 88530052 88568720 + MGP_NODShiLtJ_P0048325 Qpct protein_coding protein_coding MGP_NODShiLtJ_T0013103.1 MGP_NODShiLtJ_G0011211.1 mouse_genomes_project 17 24559317 24559825 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003691.1 MGP_NODShiLtJ_G0003319.1 mouse_genomes_project 17 35603285 35604157 - Gm19412 antisense antisense MGP_NODShiLtJ_T0003692.1 MGP_NODShiLtJ_G0003319.1 mouse_genomes_project 17 35603580 35604289 - Gm19412 antisense antisense MGP_NODShiLtJ_T0045649.1 MGP_NODShiLtJ_G0023125.1 mouse_genomes_project 17 25121565 25128084 - MGP_NODShiLtJ_P0045649 Rab26 protein_coding protein_coding MGP_NODShiLtJ_T0045650.1 MGP_NODShiLtJ_G0023125.1 mouse_genomes_project 17 25123418 25128246 - MGP_NODShiLtJ_P0045650 Rab26 protein_coding protein_coding MGP_NODShiLtJ_T0045651.1 MGP_NODShiLtJ_G0023125.1 mouse_genomes_project 17 25123429 25128070 - Rab26 protein_coding retained_intron MGP_NODShiLtJ_T0045652.1 MGP_NODShiLtJ_G0023125.1 mouse_genomes_project 17 25123685 25124313 - Rab26 protein_coding retained_intron MGP_NODShiLtJ_T0045653.1 MGP_NODShiLtJ_G0023125.1 mouse_genomes_project 17 25123907 25128568 - MGP_NODShiLtJ_P0045653 Rab26 protein_coding protein_coding MGP_NODShiLtJ_T0011308.1 MGP_NODShiLtJ_G0009441.1 mouse_genomes_project 17 10833810 10834062 + Gm23833 misc_RNA misc_RNA MGP_NODShiLtJ_T0047644.1 MGP_NODShiLtJ_G0023639.1 mouse_genomes_project 17 50874889 50884704 - MGP_NODShiLtJ_P0047644 Slc22a7 protein_coding protein_coding MGP_NODShiLtJ_T0098998.1 MGP_NODShiLtJ_G0037392.1 mouse_genomes_project 17 39594780 39594943 - Gm25104 snRNA snRNA MGP_NODShiLtJ_T0006889.1 MGP_NODShiLtJ_G0005665.1 mouse_genomes_project 17 38438674 38444495 + Gm20546 lincRNA lincRNA MGP_NODShiLtJ_T0045976.1 MGP_NODShiLtJ_G0023206.1 mouse_genomes_project 17 26772991 26784932 - MGP_NODShiLtJ_P0045976 Decr2 protein_coding protein_coding MGP_NODShiLtJ_T0045977.1 MGP_NODShiLtJ_G0023206.1 mouse_genomes_project 17 26774666 26775699 - Decr2 protein_coding processed_transcript MGP_NODShiLtJ_T0045978.1 MGP_NODShiLtJ_G0023206.1 mouse_genomes_project 17 26775415 26784932 - Decr2 protein_coding retained_intron MGP_NODShiLtJ_T0045979.1 MGP_NODShiLtJ_G0023206.1 mouse_genomes_project 17 26775872 26784922 - Decr2 protein_coding processed_transcript MGP_NODShiLtJ_T0045980.1 MGP_NODShiLtJ_G0023206.1 mouse_genomes_project 17 26782052 26784961 - Decr2 protein_coding processed_transcript MGP_NODShiLtJ_T0047504.1 MGP_NODShiLtJ_G0023612.1 mouse_genomes_project 17 49825095 49840406 + MGP_NODShiLtJ_P0047504 Aars2 protein_coding protein_coding MGP_NODShiLtJ_T0046047.1 MGP_NODShiLtJ_G0023223.1 mouse_genomes_project 17 27468896 27534264 + MGP_NODShiLtJ_P0046047 Crebrf protein_coding protein_coding MGP_NODShiLtJ_T0046048.1 MGP_NODShiLtJ_G0023223.1 mouse_genomes_project 17 27468901 27497231 + MGP_NODShiLtJ_P0046048 Crebrf protein_coding protein_coding MGP_NODShiLtJ_T0046049.1 MGP_NODShiLtJ_G0023223.1 mouse_genomes_project 17 27468956 27519462 + MGP_NODShiLtJ_P0046049 Crebrf protein_coding protein_coding MGP_NODShiLtJ_T0046050.1 MGP_NODShiLtJ_G0023223.1 mouse_genomes_project 17 27468970 27517501 + MGP_NODShiLtJ_P0046050 Crebrf protein_coding protein_coding MGP_NODShiLtJ_T0046051.1 MGP_NODShiLtJ_G0023223.1 mouse_genomes_project 17 27497255 27513390 + Crebrf protein_coding retained_intron MGP_NODShiLtJ_T0046052.1 MGP_NODShiLtJ_G0023223.1 mouse_genomes_project 17 27512904 27515122 + Crebrf protein_coding retained_intron MGP_NODShiLtJ_T0046333.1 MGP_NODShiLtJ_G0023286.1 mouse_genomes_project 17 30769736 30802310 + MGP_NODShiLtJ_P0046333 Rnf8 protein_coding protein_coding MGP_NODShiLtJ_T0046334.1 MGP_NODShiLtJ_G0023286.1 mouse_genomes_project 17 30769768 30784576 + MGP_NODShiLtJ_P0046334 Rnf8 protein_coding protein_coding MGP_NODShiLtJ_T0046335.1 MGP_NODShiLtJ_G0023286.1 mouse_genomes_project 17 30769800 30802233 + MGP_NODShiLtJ_P0046335 Rnf8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046337.1 MGP_NODShiLtJ_G0023286.1 mouse_genomes_project 17 30769836 30774508 + Rnf8 protein_coding processed_transcript MGP_NODShiLtJ_T0046338.1 MGP_NODShiLtJ_G0023286.1 mouse_genomes_project 17 30771081 30784609 + MGP_NODShiLtJ_P0046338 Rnf8 protein_coding protein_coding MGP_NODShiLtJ_T0046339.1 MGP_NODShiLtJ_G0023286.1 mouse_genomes_project 17 30786171 30795096 + Rnf8 protein_coding retained_intron MGP_NODShiLtJ_T0046340.1 MGP_NODShiLtJ_G0023286.1 mouse_genomes_project 17 30790566 30802181 + Rnf8 protein_coding retained_intron MGP_NODShiLtJ_T0046341.1 MGP_NODShiLtJ_G0023286.1 mouse_genomes_project 17 30793665 30802202 + Rnf8 protein_coding retained_intron MGP_NODShiLtJ_T0045134.1 MGP_NODShiLtJ_G0022939.1 mouse_genomes_project 17 3392769 3399527 + MGP_NODShiLtJ_P0045134 Gtf2h5 protein_coding protein_coding MGP_NODShiLtJ_T0045135.1 MGP_NODShiLtJ_G0022939.1 mouse_genomes_project 17 3392820 3395323 + Gtf2h5 protein_coding retained_intron MGP_NODShiLtJ_T0045136.1 MGP_NODShiLtJ_G0022939.1 mouse_genomes_project 17 3392913 3398142 + MGP_NODShiLtJ_P0045136 Gtf2h5 protein_coding protein_coding MGP_NODShiLtJ_T0048149.1 MGP_NODShiLtJ_G0023819.1 mouse_genomes_project 17 77404140 77459894 + MGP_NODShiLtJ_P0048149 Akain1 protein_coding protein_coding MGP_NODShiLtJ_T0003731.1 MGP_NODShiLtJ_G0003350.1 mouse_genomes_project 17 78986498 79015107 + Gm28727 antisense antisense MGP_NODShiLtJ_T0046534.1 MGP_NODShiLtJ_G0023339.1 mouse_genomes_project 17 34609249 34628066 + MGP_NODShiLtJ_P0046534 Zfp563 protein_coding protein_coding MGP_NODShiLtJ_T0046535.1 MGP_NODShiLtJ_G0023339.1 mouse_genomes_project 17 34609503 34626587 + MGP_NODShiLtJ_P0046535 Zfp563 protein_coding protein_coding MGP_NODShiLtJ_T0046536.1 MGP_NODShiLtJ_G0023339.1 mouse_genomes_project 17 34612396 34626921 + MGP_NODShiLtJ_P0046536 Zfp563 protein_coding protein_coding MGP_NODShiLtJ_T0011326.1 MGP_NODShiLtJ_G0009459.1 mouse_genomes_project 17 95806972 95807060 + Gm27435 misc_RNA misc_RNA MGP_NODShiLtJ_T0048134.1 MGP_NODShiLtJ_G0023812.1 mouse_genomes_project 17 75451549 75453308 - MGP_NODShiLtJ_P0048134 Lrrc30 protein_coding protein_coding MGP_NODShiLtJ_T0047433.1 MGP_NODShiLtJ_G0023584.1 mouse_genomes_project 17 44401067 44437423 - MGP_NODShiLtJ_P0047433 Crisp2 protein_coding protein_coding MGP_NODShiLtJ_T0047434.1 MGP_NODShiLtJ_G0023584.1 mouse_genomes_project 17 44426322 44437454 - MGP_NODShiLtJ_P0047434 Crisp2 protein_coding protein_coding MGP_NODShiLtJ_T0047435.1 MGP_NODShiLtJ_G0023584.1 mouse_genomes_project 17 44428003 44437384 - MGP_NODShiLtJ_P0047435 Crisp2 protein_coding protein_coding MGP_NODShiLtJ_T0047436.1 MGP_NODShiLtJ_G0023584.1 mouse_genomes_project 17 44428079 44437375 - MGP_NODShiLtJ_P0047436 Crisp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047437.1 MGP_NODShiLtJ_G0023584.1 mouse_genomes_project 17 44436563 44444055 - Crisp2 protein_coding processed_transcript MGP_NODShiLtJ_T0047571.1 MGP_NODShiLtJ_G0023625.1 mouse_genomes_project 17 50507902 50524951 + MGP_NODShiLtJ_P0047571 Mrps18a protein_coding protein_coding MGP_NODShiLtJ_T0047572.1 MGP_NODShiLtJ_G0023625.1 mouse_genomes_project 17 50507911 50519168 + Mrps18a protein_coding retained_intron MGP_NODShiLtJ_T0047573.1 MGP_NODShiLtJ_G0023625.1 mouse_genomes_project 17 50507912 50521887 + MGP_NODShiLtJ_P0047573 Mrps18a protein_coding protein_coding MGP_NODShiLtJ_T0047575.1 MGP_NODShiLtJ_G0023625.1 mouse_genomes_project 17 50518868 50524911 + Mrps18a protein_coding processed_transcript MGP_NODShiLtJ_T0047576.1 MGP_NODShiLtJ_G0023625.1 mouse_genomes_project 17 50521296 50523761 + Mrps18a protein_coding retained_intron MGP_NODShiLtJ_T0047577.1 MGP_NODShiLtJ_G0023625.1 mouse_genomes_project 17 50521479 50524834 + Mrps18a protein_coding retained_intron MGP_NODShiLtJ_T0045384.1 MGP_NODShiLtJ_G0023021.1 mouse_genomes_project 17 19077034 19095191 + MGP_NODShiLtJ_P0045384 Vmn2r100 protein_coding protein_coding MGP_NODShiLtJ_T0006860.1 MGP_NODShiLtJ_G0005643.1 mouse_genomes_project 17 29526951 29529041 + E230001N04Rik lincRNA lincRNA MGP_NODShiLtJ_T0006861.1 MGP_NODShiLtJ_G0005643.1 mouse_genomes_project 17 29526987 29529041 + E230001N04Rik lincRNA lincRNA MGP_NODShiLtJ_T0003704.1 MGP_NODShiLtJ_G0003330.1 mouse_genomes_project 17 38043393 38095410 + A930015D03Rik antisense antisense MGP_NODShiLtJ_T0046491.1 MGP_NODShiLtJ_G0023322.1 mouse_genomes_project 17 33870508 33881142 - MGP_NODShiLtJ_P0046491 Pglyrp2 protein_coding protein_coding MGP_NODShiLtJ_T0046492.1 MGP_NODShiLtJ_G0023322.1 mouse_genomes_project 17 33870769 33888460 - MGP_NODShiLtJ_P0046492 Pglyrp2 protein_coding protein_coding MGP_NODShiLtJ_T0047070.1 MGP_NODShiLtJ_G0023453.1 mouse_genomes_project 17 37157093 37160394 + MGP_NODShiLtJ_P0047070 Gm16181 protein_coding protein_coding MGP_NODShiLtJ_T0047462.1 MGP_NODShiLtJ_G0023600.1 mouse_genomes_project 17 47729072 47765330 + MGP_NODShiLtJ_P0047462 Pla2g7 protein_coding protein_coding MGP_NODShiLtJ_T0047463.1 MGP_NODShiLtJ_G0023600.1 mouse_genomes_project 17 47729243 47777793 + MGP_NODShiLtJ_P0047463 Pla2g7 protein_coding protein_coding MGP_NODShiLtJ_T0047464.1 MGP_NODShiLtJ_G0023600.1 mouse_genomes_project 17 47729449 47759530 + MGP_NODShiLtJ_P0047464 Pla2g7 protein_coding protein_coding MGP_NODShiLtJ_T0047465.1 MGP_NODShiLtJ_G0023600.1 mouse_genomes_project 17 47729609 47754412 + Pla2g7 protein_coding processed_transcript MGP_NODShiLtJ_T0047466.1 MGP_NODShiLtJ_G0023600.1 mouse_genomes_project 17 47729647 47772842 + MGP_NODShiLtJ_P0047466 Pla2g7 protein_coding protein_coding MGP_NODShiLtJ_T0047467.1 MGP_NODShiLtJ_G0023600.1 mouse_genomes_project 17 47729689 47773217 + Pla2g7 protein_coding retained_intron MGP_NODShiLtJ_T0100269.1 MGP_NODShiLtJ_G0038663.1 mouse_genomes_project 17 92027416 92027545 - Gm22386 snoRNA snoRNA MGP_NODShiLtJ_T0013088.1 MGP_NODShiLtJ_G0011196.1 mouse_genomes_project 17 9540481 9540775 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047286.1 MGP_NODShiLtJ_G0023500.1 mouse_genomes_project 17 38568883 38572716 - MGP_NODShiLtJ_P0047286 H2-M10.3 protein_coding protein_coding MGP_NODShiLtJ_T0101292.1 MGP_NODShiLtJ_G0039559.1 mouse_genomes_project 17 3800181 3899645 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101293.1 MGP_NODShiLtJ_G0039559.1 mouse_genomes_project 17 3800399 3899645 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0045887.1 MGP_NODShiLtJ_G0023189.1 mouse_genomes_project 17 26498051 26503155 + MGP_NODShiLtJ_P0045887 Wdr24 protein_coding protein_coding MGP_NODShiLtJ_T0045888.1 MGP_NODShiLtJ_G0023189.1 mouse_genomes_project 17 26498073 26503146 + Wdr24 protein_coding retained_intron MGP_NODShiLtJ_T0045889.1 MGP_NODShiLtJ_G0023189.1 mouse_genomes_project 17 26498954 26500096 + Wdr24 protein_coding processed_transcript MGP_NODShiLtJ_T0045890.1 MGP_NODShiLtJ_G0023189.1 mouse_genomes_project 17 26499086 26500769 + Wdr24 protein_coding retained_intron MGP_NODShiLtJ_T0046034.1 MGP_NODShiLtJ_G0023219.1 mouse_genomes_project 17 27242747 27245678 - MGP_NODShiLtJ_P0046034 Dusp1 protein_coding protein_coding MGP_NODShiLtJ_T0046035.1 MGP_NODShiLtJ_G0023219.1 mouse_genomes_project 17 27242748 27245633 - Dusp1 protein_coding retained_intron MGP_NODShiLtJ_T0046036.1 MGP_NODShiLtJ_G0023219.1 mouse_genomes_project 17 27243674 27244882 - Dusp1 protein_coding retained_intron MGP_NODShiLtJ_T0047393.1 MGP_NODShiLtJ_G0023548.1 mouse_genomes_project 17 40158268 40166066 + MGP_NODShiLtJ_P0047393 protein_coding protein_coding MGP_NODShiLtJ_T0045263.1 MGP_NODShiLtJ_G0022981.1 mouse_genomes_project 17 11088633 11092864 - MGP_NODShiLtJ_P0045263 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045163.1 MGP_NODShiLtJ_G0022954.1 mouse_genomes_project 17 5590485 5625470 + MGP_NODShiLtJ_P0045163 protein_coding protein_coding MGP_NODShiLtJ_T0045594.1 MGP_NODShiLtJ_G0023113.1 mouse_genomes_project 17 24770986 24801191 - MGP_NODShiLtJ_P0045594 Ccnf protein_coding protein_coding MGP_NODShiLtJ_T0013159.1 MGP_NODShiLtJ_G0011267.1 mouse_genomes_project 17 59347652 59348613 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045435.1 MGP_NODShiLtJ_G0023059.1 mouse_genomes_project 17 21897502 22020568 - MGP_NODShiLtJ_P0045435 protein_coding protein_coding MGP_NODShiLtJ_T0046404.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32835350 32857005 - MGP_NODShiLtJ_P0046404 Wdr4 protein_coding protein_coding MGP_NODShiLtJ_T0046405.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32835351 32857018 - MGP_NODShiLtJ_P0046405 Wdr4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046406.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32835351 32857501 - MGP_NODShiLtJ_P0046406 Wdr4 protein_coding protein_coding MGP_NODShiLtJ_T0046407.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32835353 32857018 - MGP_NODShiLtJ_P0046407 Wdr4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046408.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32837154 32842317 - Wdr4 protein_coding retained_intron MGP_NODShiLtJ_T0046409.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32840476 32844603 - Wdr4 protein_coding retained_intron MGP_NODShiLtJ_T0046410.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32844072 32854662 - Wdr4 protein_coding retained_intron MGP_NODShiLtJ_T0046411.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32844560 32865376 - MGP_NODShiLtJ_P0046411 Wdr4 protein_coding protein_coding MGP_NODShiLtJ_T0046412.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32844570 32857028 - MGP_NODShiLtJ_P0046412 Wdr4 protein_coding protein_coding MGP_NODShiLtJ_T0046413.1 MGP_NODShiLtJ_G0023306.1 mouse_genomes_project 17 32857192 32865436 - Wdr4 protein_coding processed_transcript MGP_NODShiLtJ_T0048316.1 MGP_NODShiLtJ_G0023867.1 mouse_genomes_project 17 88412290 88425208 + MGP_NODShiLtJ_P0048316 Ndufaf7 protein_coding protein_coding MGP_NODShiLtJ_T0046037.1 MGP_NODShiLtJ_G0023220.1 mouse_genomes_project 17 27282295 27283705 + MGP_NODShiLtJ_P0046037 Gm8225 protein_coding protein_coding MGP_NODShiLtJ_T0045867.1 MGP_NODShiLtJ_G0023182.1 mouse_genomes_project 17 26416778 26422492 - MGP_NODShiLtJ_P0045867 Msln protein_coding protein_coding MGP_NODShiLtJ_T0006857.1 MGP_NODShiLtJ_G0005640.1 mouse_genomes_project 17 28208700 28211066 + Gm10505 lincRNA lincRNA MGP_NODShiLtJ_T0101704.1 MGP_NODShiLtJ_G0039873.1 mouse_genomes_project 17 21044515 21044978 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006893.1 MGP_NODShiLtJ_G0005669.1 mouse_genomes_project 17 50071456 50124867 + lincRNA lincRNA MGP_NODShiLtJ_T0006894.1 MGP_NODShiLtJ_G0005669.1 mouse_genomes_project 17 50096324 50133328 + lincRNA lincRNA MGP_NODShiLtJ_T0011316.1 MGP_NODShiLtJ_G0009449.1 mouse_genomes_project 17 39283909 39284157 + Gm22388 misc_RNA misc_RNA MGP_NODShiLtJ_T0101078.1 MGP_NODShiLtJ_G0039435.1 mouse_genomes_project 17 26581675 26583719 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101079.1 MGP_NODShiLtJ_G0039435.1 mouse_genomes_project 17 26581681 26581872 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0046632.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35593464 35595474 + MGP_NODShiLtJ_P0046632 Daxx protein_coding protein_coding MGP_NODShiLtJ_T0046633.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35593495 35599598 + MGP_NODShiLtJ_P0046633 Daxx protein_coding protein_coding MGP_NODShiLtJ_T0046634.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35593548 35595563 + MGP_NODShiLtJ_P0046634 Daxx protein_coding protein_coding MGP_NODShiLtJ_T0046635.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35593565 35599525 + MGP_NODShiLtJ_P0046635 Daxx protein_coding protein_coding MGP_NODShiLtJ_T0046636.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35593651 35599590 + MGP_NODShiLtJ_P0046636 Daxx protein_coding protein_coding MGP_NODShiLtJ_T0046637.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35594327 35595948 + Daxx protein_coding retained_intron MGP_NODShiLtJ_T0046638.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35594476 35599590 + MGP_NODShiLtJ_P0046638 Daxx protein_coding protein_coding MGP_NODShiLtJ_T0046639.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35596797 35598000 + Daxx protein_coding processed_transcript MGP_NODShiLtJ_T0046640.1 MGP_NODShiLtJ_G0023363.1 mouse_genomes_project 17 35597559 35599525 + Daxx protein_coding processed_transcript MGP_NODShiLtJ_T0010089.1 MGP_NODShiLtJ_G0008222.1 mouse_genomes_project 17 27719490 27719548 + miRNA miRNA MGP_NODShiLtJ_T0013138.1 MGP_NODShiLtJ_G0011246.1 mouse_genomes_project 17 40530882 40531532 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045246.1 MGP_NODShiLtJ_G0022977.1 mouse_genomes_project 17 10964319 10999815 - MGP_NODShiLtJ_P0045246 Pnldc1 protein_coding protein_coding MGP_NODShiLtJ_T0003678.1 MGP_NODShiLtJ_G0003312.1 mouse_genomes_project 17 29979917 29981421 + 1700030A11Rik antisense antisense MGP_NODShiLtJ_T0046153.1 MGP_NODShiLtJ_G0023249.1 mouse_genomes_project 17 28996806 29018968 - MGP_NODShiLtJ_P0046153 Tcp11 protein_coding protein_coding MGP_NODShiLtJ_T0046154.1 MGP_NODShiLtJ_G0023249.1 mouse_genomes_project 17 28996807 29019023 - MGP_NODShiLtJ_P0046154 Tcp11 protein_coding protein_coding MGP_NODShiLtJ_T0046155.1 MGP_NODShiLtJ_G0023249.1 mouse_genomes_project 17 28996810 29018951 - MGP_NODShiLtJ_P0046155 Tcp11 protein_coding protein_coding MGP_NODShiLtJ_T0046156.1 MGP_NODShiLtJ_G0023249.1 mouse_genomes_project 17 28996856 28998536 - Tcp11 protein_coding processed_transcript MGP_NODShiLtJ_T0046157.1 MGP_NODShiLtJ_G0023249.1 mouse_genomes_project 17 28999686 29019023 - MGP_NODShiLtJ_P0046157 Tcp11 protein_coding protein_coding MGP_NODShiLtJ_T0046158.1 MGP_NODShiLtJ_G0023249.1 mouse_genomes_project 17 29004704 29018985 - MGP_NODShiLtJ_P0046158 Tcp11 protein_coding protein_coding MGP_NODShiLtJ_T0047961.1 MGP_NODShiLtJ_G0023747.1 mouse_genomes_project 17 62213316 62262595 - MGP_NODShiLtJ_P0047961 Ptprs protein_coding protein_coding MGP_NODShiLtJ_T0047962.1 MGP_NODShiLtJ_G0023747.1 mouse_genomes_project 17 62213318 62276779 - MGP_NODShiLtJ_P0047962 Ptprs protein_coding protein_coding MGP_NODShiLtJ_T0047963.1 MGP_NODShiLtJ_G0023747.1 mouse_genomes_project 17 62223121 62276665 - Ptprs protein_coding processed_transcript MGP_NODShiLtJ_T0047964.1 MGP_NODShiLtJ_G0023747.1 mouse_genomes_project 17 62225869 62276746 - MGP_NODShiLtJ_P0047964 Ptprs protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048413.1 MGP_NODShiLtJ_G0023911.1 mouse_genomes_project 17 96228100 96397814 - MGP_NODShiLtJ_P0048413 Srbd1 protein_coding protein_coding MGP_NODShiLtJ_T0047916.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61778375 61786960 + MGP_NODShiLtJ_P0047916 Mpnd protein_coding protein_coding MGP_NODShiLtJ_T0047917.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61784238 61791779 + MGP_NODShiLtJ_P0047917 Mpnd protein_coding protein_coding MGP_NODShiLtJ_T0047918.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61784245 61791635 + MGP_NODShiLtJ_P0047918 Mpnd protein_coding protein_coding MGP_NODShiLtJ_T0047919.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61784268 61791642 + MGP_NODShiLtJ_P0047919 Mpnd protein_coding protein_coding MGP_NODShiLtJ_T0047920.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61784292 61787358 + Mpnd protein_coding retained_intron MGP_NODShiLtJ_T0047921.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61784370 61791603 + MGP_NODShiLtJ_P0047921 Mpnd protein_coding protein_coding MGP_NODShiLtJ_T0047922.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61784970 61786703 + Mpnd protein_coding retained_intron MGP_NODShiLtJ_T0047923.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61785477 61790486 + MGP_NODShiLtJ_P0047923 Mpnd protein_coding protein_coding MGP_NODShiLtJ_T0047924.1 MGP_NODShiLtJ_G0023729.1 mouse_genomes_project 17 61786978 61790113 + Mpnd protein_coding retained_intron MGP_NODShiLtJ_T0006917.1 MGP_NODShiLtJ_G0005682.1 mouse_genomes_project 17 78861633 78873100 - 5031415H12Rik lincRNA lincRNA MGP_NODShiLtJ_T0046541.1 MGP_NODShiLtJ_G0023343.1 mouse_genomes_project 17 34727003 34728141 + MGP_NODShiLtJ_P0046541 protein_coding protein_coding MGP_NODShiLtJ_T0010081.1 MGP_NODShiLtJ_G0008214.1 mouse_genomes_project 17 24782199 24782277 - Mir5134 miRNA miRNA MGP_NODShiLtJ_T0047049.1 MGP_NODShiLtJ_G0023446.1 mouse_genomes_project 17 37072596 37089466 - MGP_NODShiLtJ_P0047049 Prrc2a protein_coding protein_coding MGP_NODShiLtJ_T0047050.1 MGP_NODShiLtJ_G0023446.1 mouse_genomes_project 17 37072608 37087538 - MGP_NODShiLtJ_P0047050 Prrc2a protein_coding protein_coding MGP_NODShiLtJ_T0047051.1 MGP_NODShiLtJ_G0023446.1 mouse_genomes_project 17 37072697 37073887 - Prrc2a protein_coding retained_intron MGP_NODShiLtJ_T0047052.1 MGP_NODShiLtJ_G0023446.1 mouse_genomes_project 17 37073853 37074473 - Prrc2a protein_coding retained_intron MGP_NODShiLtJ_T0047053.1 MGP_NODShiLtJ_G0023446.1 mouse_genomes_project 17 37076769 37077828 - Prrc2a protein_coding retained_intron MGP_NODShiLtJ_T0047054.1 MGP_NODShiLtJ_G0023446.1 mouse_genomes_project 17 37081701 37089404 - Prrc2a protein_coding processed_transcript MGP_NODShiLtJ_T0006852.1 MGP_NODShiLtJ_G0005635.1 mouse_genomes_project 17 26466959 26647395 + lincRNA lincRNA MGP_NODShiLtJ_T0045721.1 MGP_NODShiLtJ_G0023150.1 mouse_genomes_project 17 25517123 25518296 + MGP_NODShiLtJ_P0045721 Mrps34 protein_coding protein_coding MGP_NODShiLtJ_T0045722.1 MGP_NODShiLtJ_G0023150.1 mouse_genomes_project 17 25517130 25519519 + MGP_NODShiLtJ_P0045722 Mrps34 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045723.1 MGP_NODShiLtJ_G0023150.1 mouse_genomes_project 17 25517142 25518123 + Mrps34 protein_coding retained_intron MGP_NODShiLtJ_T0045968.1 MGP_NODShiLtJ_G0023204.1 mouse_genomes_project 17 26640982 26670120 - MGP_NODShiLtJ_P0045968 Capn15 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045969.1 MGP_NODShiLtJ_G0023204.1 mouse_genomes_project 17 26642176 26670113 - MGP_NODShiLtJ_P0045969 Capn15 protein_coding protein_coding MGP_NODShiLtJ_T0047735.1 MGP_NODShiLtJ_G0023673.1 mouse_genomes_project 17 52178957 52192870 + MGP_NODShiLtJ_P0047735 Med20 protein_coding protein_coding MGP_NODShiLtJ_T0047736.1 MGP_NODShiLtJ_G0023673.1 mouse_genomes_project 17 52178960 52188014 + Med20 protein_coding retained_intron MGP_NODShiLtJ_T0047739.1 MGP_NODShiLtJ_G0023673.1 mouse_genomes_project 17 52178983 52192700 + Med20 protein_coding retained_intron MGP_NODShiLtJ_T0047741.1 MGP_NODShiLtJ_G0023673.1 mouse_genomes_project 17 52178996 52180671 + Med20 protein_coding retained_intron MGP_NODShiLtJ_T0013127.1 MGP_NODShiLtJ_G0011235.1 mouse_genomes_project 17 38672779 38673351 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045504.1 MGP_NODShiLtJ_G0023089.1 mouse_genomes_project 17 24225245 24234423 - MGP_NODShiLtJ_P0045504 Flywch1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045505.1 MGP_NODShiLtJ_G0023089.1 mouse_genomes_project 17 24226623 24242550 - MGP_NODShiLtJ_P0045505 Flywch1 protein_coding protein_coding MGP_NODShiLtJ_T0045506.1 MGP_NODShiLtJ_G0023089.1 mouse_genomes_project 17 24226632 24234980 - MGP_NODShiLtJ_P0045506 Flywch1 protein_coding protein_coding MGP_NODShiLtJ_T0047948.1 MGP_NODShiLtJ_G0023742.1 mouse_genomes_project 17 62059154 62067359 - MGP_NODShiLtJ_P0047948 Ticam1 protein_coding protein_coding MGP_NODShiLtJ_T0047379.1 MGP_NODShiLtJ_G0023537.1 mouse_genomes_project 17 39827647 39828685 + MGP_NODShiLtJ_P0047379 Olfr108 protein_coding protein_coding MGP_NODShiLtJ_T0101733.1 MGP_NODShiLtJ_G0039902.1 mouse_genomes_project 17 38086853 38125054 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047468.1 MGP_NODShiLtJ_G0023601.1 mouse_genomes_project 17 47780863 47796687 - MGP_NODShiLtJ_P0047468 Tdrd6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047469.1 MGP_NODShiLtJ_G0023601.1 mouse_genomes_project 17 47780868 47796801 - MGP_NODShiLtJ_P0047469 Tdrd6 protein_coding protein_coding MGP_NODShiLtJ_T0047470.1 MGP_NODShiLtJ_G0023601.1 mouse_genomes_project 17 47780872 47796801 - MGP_NODShiLtJ_P0047470 Tdrd6 protein_coding protein_coding MGP_NODShiLtJ_T0047471.1 MGP_NODShiLtJ_G0023601.1 mouse_genomes_project 17 47781092 47786025 - Tdrd6 protein_coding processed_transcript MGP_NODShiLtJ_T0047798.1 MGP_NODShiLtJ_G0023688.1 mouse_genomes_project 17 52946841 52960448 + MGP_NODShiLtJ_P0047798 Trem1 protein_coding protein_coding MGP_NODShiLtJ_T0047799.1 MGP_NODShiLtJ_G0023688.1 mouse_genomes_project 17 52946844 52960998 + MGP_NODShiLtJ_P0047799 Trem1 protein_coding protein_coding MGP_NODShiLtJ_T0045595.1 MGP_NODShiLtJ_G0023114.1 mouse_genomes_project 17 24811873 24906109 - MGP_NODShiLtJ_P0045595 Abca17 protein_coding protein_coding MGP_NODShiLtJ_T0045596.1 MGP_NODShiLtJ_G0023114.1 mouse_genomes_project 17 24811893 24902348 - MGP_NODShiLtJ_P0045596 Abca17 protein_coding protein_coding MGP_NODShiLtJ_T0045479.1 MGP_NODShiLtJ_G0023078.1 mouse_genomes_project 17 24092289 24110511 - MGP_NODShiLtJ_P0045479 Mmp25 protein_coding protein_coding MGP_NODShiLtJ_T0045297.1 MGP_NODShiLtJ_G0022992.1 mouse_genomes_project 17 13359534 13362287 + MGP_NODShiLtJ_P0045297 1600012H06Rik protein_coding protein_coding MGP_NODShiLtJ_T0045298.1 MGP_NODShiLtJ_G0022992.1 mouse_genomes_project 17 13359580 13362285 + MGP_NODShiLtJ_P0045298 1600012H06Rik protein_coding protein_coding MGP_NODShiLtJ_T0045299.1 MGP_NODShiLtJ_G0022992.1 mouse_genomes_project 17 13359619 13361337 + MGP_NODShiLtJ_P0045299 1600012H06Rik protein_coding protein_coding MGP_NODShiLtJ_T0045300.1 MGP_NODShiLtJ_G0022992.1 mouse_genomes_project 17 13359621 13377207 + 1600012H06Rik protein_coding processed_transcript MGP_NODShiLtJ_T0045376.1 MGP_NODShiLtJ_G0023014.1 mouse_genomes_project 17 17005628 17006600 + MGP_NODShiLtJ_P0045376 Fpr-rs4 protein_coding protein_coding MGP_NODShiLtJ_T0045573.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24722821 24753229 - MGP_NODShiLtJ_P0045573 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045574.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24722822 24753256 - MGP_NODShiLtJ_P0045574 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045575.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24724547 24753209 - MGP_NODShiLtJ_P0045575 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045576.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726270 24753213 - MGP_NODShiLtJ_P0045576 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045577.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726443 24753208 - MGP_NODShiLtJ_P0045577 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045578.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726489 24753225 - MGP_NODShiLtJ_P0045578 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045579.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726500 24747630 - MGP_NODShiLtJ_P0045579 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045580.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726550 24753190 - MGP_NODShiLtJ_P0045580 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045581.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726550 24753217 - MGP_NODShiLtJ_P0045581 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045582.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726569 24753208 - MGP_NODShiLtJ_P0045582 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045583.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726570 24747630 - MGP_NODShiLtJ_P0045583 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045584.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24726716 24753219 - MGP_NODShiLtJ_P0045584 Tbc1d24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045585.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24727920 24728744 - Tbc1d24 protein_coding processed_transcript MGP_NODShiLtJ_T0045586.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24729118 24753176 - MGP_NODShiLtJ_P0045586 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045587.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24737290 24753213 - Tbc1d24 protein_coding processed_transcript MGP_NODShiLtJ_T0045588.1 MGP_NODShiLtJ_G0023111.1 mouse_genomes_project 17 24751541 24757084 - MGP_NODShiLtJ_P0045588 Tbc1d24 protein_coding protein_coding MGP_NODShiLtJ_T0045496.1 MGP_NODShiLtJ_G0023085.1 mouse_genomes_project 17 24172041 24191672 - protein_coding retained_intron MGP_NODShiLtJ_T0045497.1 MGP_NODShiLtJ_G0023085.1 mouse_genomes_project 17 24172041 24189606 - MGP_NODShiLtJ_P0045497 protein_coding protein_coding MGP_NODShiLtJ_T0045498.1 MGP_NODShiLtJ_G0023085.1 mouse_genomes_project 17 24172041 24191672 - MGP_NODShiLtJ_P0045498 protein_coding protein_coding MGP_NODShiLtJ_T0045499.1 MGP_NODShiLtJ_G0023085.1 mouse_genomes_project 17 24172612 24190829 - protein_coding retained_intron MGP_NODShiLtJ_T0045500.1 MGP_NODShiLtJ_G0023085.1 mouse_genomes_project 17 24172612 24173894 - protein_coding retained_intron MGP_NODShiLtJ_T0017421.1 MGP_NODShiLtJ_G0015215.1 mouse_genomes_project 17 35249063 35264014 + Gm20507 processed_transcript processed_transcript MGP_NODShiLtJ_T0046465.1 MGP_NODShiLtJ_G0023319.1 mouse_genomes_project 17 33773246 33788471 - MGP_NODShiLtJ_P0046465 Akap8l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046466.1 MGP_NODShiLtJ_G0023319.1 mouse_genomes_project 17 33775886 33805296 - MGP_NODShiLtJ_P0046466 Akap8l protein_coding protein_coding MGP_NODShiLtJ_T0047915.1 MGP_NODShiLtJ_G0023728.1 mouse_genomes_project 17 61768275 61778235 - MGP_NODShiLtJ_P0047915 Stap2 protein_coding protein_coding MGP_NODShiLtJ_T0013097.1 MGP_NODShiLtJ_G0011205.1 mouse_genomes_project 17 22079700 22080148 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047289.1 MGP_NODShiLtJ_G0023502.1 mouse_genomes_project 17 38776139 38778307 + MGP_NODShiLtJ_P0047289 H2-M11 protein_coding protein_coding MGP_NODShiLtJ_T0098985.1 MGP_NODShiLtJ_G0037379.1 mouse_genomes_project 17 11973422 11973529 + Gm24867 snRNA snRNA MGP_NODShiLtJ_T0010074.1 MGP_NODShiLtJ_G0008207.1 mouse_genomes_project 17 10935437 10935547 - Gm24085 miRNA miRNA MGP_NODShiLtJ_T0047832.1 MGP_NODShiLtJ_G0023697.1 mouse_genomes_project 17 53162556 53177188 - MGP_NODShiLtJ_P0047832 Apobec2 protein_coding protein_coding MGP_NODShiLtJ_T0047072.1 MGP_NODShiLtJ_G0023454.1 mouse_genomes_project 17 37169911 37175019 + Atp6v1g2 protein_coding retained_intron MGP_NODShiLtJ_T0047073.1 MGP_NODShiLtJ_G0023454.1 mouse_genomes_project 17 37171339 37174057 + MGP_NODShiLtJ_P0047073 Atp6v1g2 protein_coding protein_coding MGP_NODShiLtJ_T0047074.1 MGP_NODShiLtJ_G0023454.1 mouse_genomes_project 17 37172129 37174156 + MGP_NODShiLtJ_P0047074 Atp6v1g2 protein_coding protein_coding MGP_NODShiLtJ_T0047075.1 MGP_NODShiLtJ_G0023454.1 mouse_genomes_project 17 37172143 37174325 + Atp6v1g2 protein_coding retained_intron MGP_NODShiLtJ_T0047076.1 MGP_NODShiLtJ_G0023454.1 mouse_genomes_project 17 37172813 37175019 + MGP_NODShiLtJ_P0047076 Atp6v1g2 protein_coding protein_coding MGP_NODShiLtJ_T0047077.1 MGP_NODShiLtJ_G0023454.1 mouse_genomes_project 17 37172907 37174219 + Atp6v1g2 protein_coding retained_intron MGP_NODShiLtJ_T0048064.1 MGP_NODShiLtJ_G0023790.1 mouse_genomes_project 17 69956931 70250010 - MGP_NODShiLtJ_P0048064 Efna5 protein_coding protein_coding MGP_NODShiLtJ_T0048065.1 MGP_NODShiLtJ_G0023790.1 mouse_genomes_project 17 69960054 70249837 - MGP_NODShiLtJ_P0048065 Efna5 protein_coding protein_coding MGP_NODShiLtJ_T0048385.1 MGP_NODShiLtJ_G0023899.1 mouse_genomes_project 17 94285343 94574365 - MGP_NODShiLtJ_P0048385 Thada protein_coding protein_coding MGP_NODShiLtJ_T0048047.1 MGP_NODShiLtJ_G0023783.1 mouse_genomes_project 17 63169516 63221345 + MGP_NODShiLtJ_P0048047 Vav1 protein_coding protein_coding MGP_NODShiLtJ_T0048048.1 MGP_NODShiLtJ_G0023783.1 mouse_genomes_project 17 63169516 63221426 + MGP_NODShiLtJ_P0048048 Vav1 protein_coding protein_coding MGP_NODShiLtJ_T0048049.1 MGP_NODShiLtJ_G0023783.1 mouse_genomes_project 17 63169543 63221350 + MGP_NODShiLtJ_P0048049 Vav1 protein_coding protein_coding MGP_NODShiLtJ_T0048050.1 MGP_NODShiLtJ_G0023783.1 mouse_genomes_project 17 63194615 63197870 + Vav1 protein_coding retained_intron MGP_NODShiLtJ_T0048051.1 MGP_NODShiLtJ_G0023783.1 mouse_genomes_project 17 63204362 63221348 + Vav1 protein_coding processed_transcript MGP_NODShiLtJ_T0046467.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33808742 33839668 - MGP_NODShiLtJ_P0046467 Wiz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046468.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33808743 33840361 - MGP_NODShiLtJ_P0046468 Wiz protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046469.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33808744 33839909 - MGP_NODShiLtJ_P0046469 Wiz protein_coding protein_coding MGP_NODShiLtJ_T0046470.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33808748 33840415 - MGP_NODShiLtJ_P0046470 Wiz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046471.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33809336 33817654 - MGP_NODShiLtJ_P0046471 Wiz protein_coding protein_coding MGP_NODShiLtJ_T0046472.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33809711 33838783 - MGP_NODShiLtJ_P0046472 Wiz protein_coding protein_coding MGP_NODShiLtJ_T0046473.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33816365 33819154 - Wiz protein_coding processed_transcript MGP_NODShiLtJ_T0046474.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33816504 33826020 - Wiz protein_coding retained_intron MGP_NODShiLtJ_T0046475.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33816599 33839610 - MGP_NODShiLtJ_P0046475 Wiz protein_coding protein_coding MGP_NODShiLtJ_T0046476.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33823632 33839750 - Wiz protein_coding retained_intron MGP_NODShiLtJ_T0046477.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33824672 33839974 - MGP_NODShiLtJ_P0046477 Wiz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046478.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33825906 33840400 - MGP_NODShiLtJ_P0046478 Wiz protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046479.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33826020 33840425 - Wiz protein_coding retained_intron MGP_NODShiLtJ_T0046480.1 MGP_NODShiLtJ_G0023320.1 mouse_genomes_project 17 33838596 33840140 - MGP_NODShiLtJ_P0046480 Wiz protein_coding protein_coding MGP_NODShiLtJ_T0045597.1 MGP_NODShiLtJ_G0023115.1 mouse_genomes_project 17 24907033 24968865 + Abca3 protein_coding retained_intron MGP_NODShiLtJ_T0045598.1 MGP_NODShiLtJ_G0023115.1 mouse_genomes_project 17 24907106 24981114 + MGP_NODShiLtJ_P0045598 Abca3 protein_coding protein_coding MGP_NODShiLtJ_T0045599.1 MGP_NODShiLtJ_G0023115.1 mouse_genomes_project 17 24907129 24981114 + MGP_NODShiLtJ_P0045599 Abca3 protein_coding protein_coding MGP_NODShiLtJ_T0045600.1 MGP_NODShiLtJ_G0023115.1 mouse_genomes_project 17 24907174 24972045 + Abca3 protein_coding retained_intron MGP_NODShiLtJ_T0045601.1 MGP_NODShiLtJ_G0023115.1 mouse_genomes_project 17 24907174 24944896 + Abca3 protein_coding retained_intron MGP_NODShiLtJ_T0045602.1 MGP_NODShiLtJ_G0023115.1 mouse_genomes_project 17 24907186 24916006 + Abca3 protein_coding processed_transcript MGP_NODShiLtJ_T0045603.1 MGP_NODShiLtJ_G0023115.1 mouse_genomes_project 17 24907191 24950415 + Abca3 protein_coding retained_intron MGP_NODShiLtJ_T0045604.1 MGP_NODShiLtJ_G0023115.1 mouse_genomes_project 17 24919522 24981114 + MGP_NODShiLtJ_P0045604 Abca3 protein_coding protein_coding MGP_NODShiLtJ_T0003706.1 MGP_NODShiLtJ_G0003332.1 mouse_genomes_project 17 38136776 38169408 + antisense antisense MGP_NODShiLtJ_T0000976.1 MGP_NODShiLtJ_G0000902.1 mouse_genomes_project 17 89337811 89355756 - TEC TEC MGP_NODShiLtJ_T0045401.1 MGP_NODShiLtJ_G0023038.1 mouse_genomes_project 17 20791985 20792936 + MGP_NODShiLtJ_P0045401 Vmn1r230 protein_coding protein_coding MGP_NODShiLtJ_T0047412.1 MGP_NODShiLtJ_G0023565.1 mouse_genomes_project 17 40761353 40762292 + MGP_NODShiLtJ_P0047412 Olfr134 protein_coding protein_coding MGP_NODShiLtJ_T0003665.1 MGP_NODShiLtJ_G0003300.1 mouse_genomes_project 17 12076533 12077492 - Gm16049 antisense antisense MGP_NODShiLtJ_T0046971.1 MGP_NODShiLtJ_G0023429.1 mouse_genomes_project 17 36940690 36943982 - Sapcd1 protein_coding retained_intron MGP_NODShiLtJ_T0046972.1 MGP_NODShiLtJ_G0023429.1 mouse_genomes_project 17 36940690 36944237 - MGP_NODShiLtJ_P0046972 Sapcd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046973.1 MGP_NODShiLtJ_G0023429.1 mouse_genomes_project 17 36940708 36944339 - MGP_NODShiLtJ_P0046973 Sapcd1 protein_coding protein_coding MGP_NODShiLtJ_T0046974.1 MGP_NODShiLtJ_G0023429.1 mouse_genomes_project 17 36940996 36944339 - MGP_NODShiLtJ_P0046974 Sapcd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013092.1 MGP_NODShiLtJ_G0011200.1 mouse_genomes_project 17 11105352 11105775 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013083.1 MGP_NODShiLtJ_G0011191.1 mouse_genomes_project 17 3128652 3128950 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047255.1 MGP_NODShiLtJ_G0023490.1 mouse_genomes_project 17 38101104 38117408 + MGP_NODShiLtJ_P0047255 protein_coding protein_coding MGP_NODShiLtJ_T0047694.1 MGP_NODShiLtJ_G0023661.1 mouse_genomes_project 17 51390907 51392750 + MGP_NODShiLtJ_P0047694 Tbcc protein_coding protein_coding MGP_NODShiLtJ_T0046533.1 MGP_NODShiLtJ_G0023338.1 mouse_genomes_project 17 34567208 34571117 - MGP_NODShiLtJ_P0046533 4921501E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0048086.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73416059 73438670 + MGP_NODShiLtJ_P0048086 Ppp4r1 protein_coding protein_coding MGP_NODShiLtJ_T0048087.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73416266 73448009 + MGP_NODShiLtJ_P0048087 Ppp4r1 protein_coding protein_coding MGP_NODShiLtJ_T0048088.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73417764 73448235 + MGP_NODShiLtJ_P0048088 Ppp4r1 protein_coding protein_coding MGP_NODShiLtJ_T0048089.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73417787 73480846 + MGP_NODShiLtJ_P0048089 Ppp4r1 protein_coding protein_coding MGP_NODShiLtJ_T0048090.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73417787 73480850 + MGP_NODShiLtJ_P0048090 Ppp4r1 protein_coding protein_coding MGP_NODShiLtJ_T0048091.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73434800 73445171 + Ppp4r1 protein_coding processed_transcript MGP_NODShiLtJ_T0048092.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73437494 73445144 + Ppp4r1 protein_coding retained_intron MGP_NODShiLtJ_T0048093.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73453375 73470349 + Ppp4r1 protein_coding processed_transcript MGP_NODShiLtJ_T0048094.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73457355 73480780 + Ppp4r1 protein_coding processed_transcript MGP_NODShiLtJ_T0048095.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73463889 73472443 + MGP_NODShiLtJ_P0048095 Ppp4r1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048096.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73468305 73472379 + Ppp4r1 protein_coding retained_intron MGP_NODShiLtJ_T0048097.1 MGP_NODShiLtJ_G0023801.1 mouse_genomes_project 17 73476812 73477905 + MGP_NODShiLtJ_P0048097 Ppp4r1 protein_coding protein_coding MGP_NODShiLtJ_T0013184.1 MGP_NODShiLtJ_G0011292.1 mouse_genomes_project 17 103938892 103943335 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045714.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25514159 25561491 - MGP_NODShiLtJ_P0045714 Mapk8ip3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045729.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25519522 25561530 - MGP_NODShiLtJ_P0045729 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045730.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25519522 25561530 - MGP_NODShiLtJ_P0045730 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045731.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25519549 25561465 - MGP_NODShiLtJ_P0045731 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045732.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25519549 25561520 - MGP_NODShiLtJ_P0045732 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045733.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25519549 25561521 - MGP_NODShiLtJ_P0045733 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045734.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25519549 25561447 - MGP_NODShiLtJ_P0045734 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045735.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25519550 25561482 - MGP_NODShiLtJ_P0045735 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045736.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25520624 25521734 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0045737.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25520815 25561513 - MGP_NODShiLtJ_P0045737 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045738.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25520964 25561521 - MGP_NODShiLtJ_P0045738 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045739.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25521680 25523103 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0045740.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25522560 25523735 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0045741.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25523834 25525099 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0045742.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25524707 25525382 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0045743.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25526546 25527805 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0045744.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25527197 25528817 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0045745.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25528853 25538680 - Mapk8ip3 protein_coding processed_transcript MGP_NODShiLtJ_T0045746.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25528943 25545952 - MGP_NODShiLtJ_P0045746 Mapk8ip3 protein_coding protein_coding MGP_NODShiLtJ_T0045747.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25537467 25546295 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0045748.1 MGP_NODShiLtJ_G0023149.1 mouse_genomes_project 17 25549960 25561498 - Mapk8ip3 protein_coding retained_intron MGP_NODShiLtJ_T0013173.1 MGP_NODShiLtJ_G0011281.1 mouse_genomes_project 17 86993785 86994100 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046063.1 MGP_NODShiLtJ_G0023226.1 mouse_genomes_project 17 27730461 27735224 + MGP_NODShiLtJ_P0046063 Phf1 protein_coding protein_coding MGP_NODShiLtJ_T0011323.1 MGP_NODShiLtJ_G0009456.1 mouse_genomes_project 17 77576778 77577017 - Gm22967 misc_RNA misc_RNA MGP_NODShiLtJ_T0006874.1 MGP_NODShiLtJ_G0005652.1 mouse_genomes_project 17 33825906 33827946 + lincRNA lincRNA MGP_NODShiLtJ_T0006938.1 MGP_NODShiLtJ_G0005698.1 mouse_genomes_project 17 106903429 106905101 + Gm26734 lincRNA lincRNA MGP_NODShiLtJ_T0047380.1 MGP_NODShiLtJ_G0023538.1 mouse_genomes_project 17 39851711 39852656 + MGP_NODShiLtJ_P0047380 Olfr109 protein_coding protein_coding MGP_NODShiLtJ_T0017396.1 MGP_NODShiLtJ_G0015203.1 mouse_genomes_project 17 5988841 6015779 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017397.1 MGP_NODShiLtJ_G0015203.1 mouse_genomes_project 17 5999738 6001202 - processed_transcript processed_transcript MGP_NODShiLtJ_T0017398.1 MGP_NODShiLtJ_G0015203.1 mouse_genomes_project 17 6000453 6015807 - processed_transcript retained_intron MGP_NODShiLtJ_T0011321.1 MGP_NODShiLtJ_G0009454.1 mouse_genomes_project 17 68215320 68215616 + Gm23773 misc_RNA misc_RNA MGP_NODShiLtJ_T0045211.1 MGP_NODShiLtJ_G0022966.1 mouse_genomes_project 17 8297923 8777109 - MGP_NODShiLtJ_P0045211 Pacrg protein_coding protein_coding MGP_NODShiLtJ_T0045212.1 MGP_NODShiLtJ_G0022966.1 mouse_genomes_project 17 8483484 8543851 - Pacrg protein_coding processed_transcript MGP_NODShiLtJ_T0048205.1 MGP_NODShiLtJ_G0023827.1 mouse_genomes_project 17 79418522 79492307 - MGP_NODShiLtJ_P0048205 Emilin2 protein_coding protein_coding MGP_NODShiLtJ_T0047362.1 MGP_NODShiLtJ_G0023521.1 mouse_genomes_project 17 39358691 39359737 - MGP_NODShiLtJ_P0047362 Olfr90 protein_coding protein_coding MGP_NODShiLtJ_T0006895.1 MGP_NODShiLtJ_G0005670.1 mouse_genomes_project 17 50699940 50706481 + Gm26785 lincRNA lincRNA MGP_NODShiLtJ_T0006841.1 MGP_NODShiLtJ_G0005627.1 mouse_genomes_project 17 15662152 15695150 + lincRNA lincRNA MGP_NODShiLtJ_T0006842.1 MGP_NODShiLtJ_G0005627.1 mouse_genomes_project 17 15693902 15694763 + lincRNA lincRNA MGP_NODShiLtJ_T0045656.1 MGP_NODShiLtJ_G0023127.1 mouse_genomes_project 17 25194965 25231992 - MGP_NODShiLtJ_P0045656 Tsc2 protein_coding protein_coding MGP_NODShiLtJ_T0045657.1 MGP_NODShiLtJ_G0023127.1 mouse_genomes_project 17 25195537 25231959 - MGP_NODShiLtJ_P0045657 Tsc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045192.1 MGP_NODShiLtJ_G0022960.1 mouse_genomes_project 17 6142843 6152293 + MGP_NODShiLtJ_P0045192 T protein_coding protein_coding MGP_NODShiLtJ_T0045193.1 MGP_NODShiLtJ_G0022960.1 mouse_genomes_project 17 6143345 6146789 + MGP_NODShiLtJ_P0045193 T protein_coding protein_coding MGP_NODShiLtJ_T0045194.1 MGP_NODShiLtJ_G0022960.1 mouse_genomes_project 17 6143831 6151539 + MGP_NODShiLtJ_P0045194 T protein_coding protein_coding MGP_NODShiLtJ_T0046245.1 MGP_NODShiLtJ_G0023266.1 mouse_genomes_project 17 29818093 29827983 + MGP_NODShiLtJ_P0046245 Mapk13 protein_coding protein_coding MGP_NODShiLtJ_T0046246.1 MGP_NODShiLtJ_G0023266.1 mouse_genomes_project 17 29818122 29827504 + Mapk13 protein_coding retained_intron MGP_NODShiLtJ_T0046247.1 MGP_NODShiLtJ_G0023266.1 mouse_genomes_project 17 29818135 29827831 + MGP_NODShiLtJ_P0046247 Mapk13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046248.1 MGP_NODShiLtJ_G0023266.1 mouse_genomes_project 17 29818158 29826911 + Mapk13 protein_coding retained_intron MGP_NODShiLtJ_T0048148.1 MGP_NODShiLtJ_G0023818.1 mouse_genomes_project 17 77346935 77350976 + MGP_NODShiLtJ_P0048148 Zbtb14 protein_coding protein_coding MGP_NODShiLtJ_T0047496.1 MGP_NODShiLtJ_G0023609.1 mouse_genomes_project 17 49034766 49396706 + MGP_NODShiLtJ_P0047496 Supt3 protein_coding protein_coding MGP_NODShiLtJ_T0047497.1 MGP_NODShiLtJ_G0023609.1 mouse_genomes_project 17 49034945 49196414 + Supt3 protein_coding processed_transcript MGP_NODShiLtJ_T0047498.1 MGP_NODShiLtJ_G0023609.1 mouse_genomes_project 17 49035016 49396702 + MGP_NODShiLtJ_P0047498 Supt3 protein_coding protein_coding MGP_NODShiLtJ_T0047499.1 MGP_NODShiLtJ_G0023609.1 mouse_genomes_project 17 49044599 49396695 + MGP_NODShiLtJ_P0047499 Supt3 protein_coding protein_coding MGP_NODShiLtJ_T0013094.1 MGP_NODShiLtJ_G0011202.1 mouse_genomes_project 17 13358315 13359054 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047886.1 MGP_NODShiLtJ_G0023711.1 mouse_genomes_project 17 58711756 58738814 + MGP_NODShiLtJ_P0047886 Rab5a protein_coding protein_coding MGP_NODShiLtJ_T0046912.1 MGP_NODShiLtJ_G0023418.1 mouse_genomes_project 17 36752044 36774851 - MGP_NODShiLtJ_P0046912 C2 protein_coding protein_coding MGP_NODShiLtJ_T0046913.1 MGP_NODShiLtJ_G0023418.1 mouse_genomes_project 17 36752045 36774925 - MGP_NODShiLtJ_P0046913 C2 protein_coding protein_coding MGP_NODShiLtJ_T0046914.1 MGP_NODShiLtJ_G0023418.1 mouse_genomes_project 17 36752046 36796072 - MGP_NODShiLtJ_P0046914 C2 protein_coding protein_coding MGP_NODShiLtJ_T0046915.1 MGP_NODShiLtJ_G0023418.1 mouse_genomes_project 17 36753112 36753853 - MGP_NODShiLtJ_P0046915 C2 protein_coding protein_coding MGP_NODShiLtJ_T0046916.1 MGP_NODShiLtJ_G0023418.1 mouse_genomes_project 17 36753609 36754393 - C2 protein_coding retained_intron MGP_NODShiLtJ_T0046917.1 MGP_NODShiLtJ_G0023418.1 mouse_genomes_project 17 36769913 36774792 - C2 protein_coding processed_transcript MGP_NODShiLtJ_T0046919.1 MGP_NODShiLtJ_G0023418.1 mouse_genomes_project 17 36791682 36796082 - C2 protein_coding processed_transcript MGP_NODShiLtJ_T0046920.1 MGP_NODShiLtJ_G0023418.1 mouse_genomes_project 17 36791685 36798794 - C2 protein_coding processed_transcript MGP_NODShiLtJ_T0047196.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37929005 37941590 - MGP_NODShiLtJ_P0047196 Atat1 protein_coding protein_coding MGP_NODShiLtJ_T0047197.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37929019 37941561 - MGP_NODShiLtJ_P0047197 Atat1 protein_coding protein_coding MGP_NODShiLtJ_T0047198.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37929022 37941572 - MGP_NODShiLtJ_P0047198 Atat1 protein_coding protein_coding MGP_NODShiLtJ_T0047199.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37929025 37929993 - Atat1 protein_coding retained_intron MGP_NODShiLtJ_T0047200.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37929292 37940476 - MGP_NODShiLtJ_P0047200 Atat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047201.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37931221 37941560 - MGP_NODShiLtJ_P0047201 Atat1 protein_coding protein_coding MGP_NODShiLtJ_T0047202.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37931256 37941560 - MGP_NODShiLtJ_P0047202 Atat1 protein_coding protein_coding MGP_NODShiLtJ_T0047203.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37931899 37935712 - MGP_NODShiLtJ_P0047203 Atat1 protein_coding protein_coding MGP_NODShiLtJ_T0047204.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37933390 37940950 - Atat1 protein_coding retained_intron MGP_NODShiLtJ_T0047205.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37933407 37941088 - Atat1 protein_coding processed_transcript MGP_NODShiLtJ_T0047206.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37933411 37940554 - Atat1 protein_coding retained_intron MGP_NODShiLtJ_T0047207.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37933444 37941141 - MGP_NODShiLtJ_P0047207 Atat1 protein_coding protein_coding MGP_NODShiLtJ_T0047208.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37934715 37941254 - Atat1 protein_coding retained_intron MGP_NODShiLtJ_T0047209.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37939479 37941560 - Atat1 protein_coding processed_transcript MGP_NODShiLtJ_T0047210.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37940098 37941546 - MGP_NODShiLtJ_P0047210 Atat1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047211.1 MGP_NODShiLtJ_G0023480.1 mouse_genomes_project 17 37940445 37941524 - Atat1 protein_coding retained_intron MGP_NODShiLtJ_T0048190.1 MGP_NODShiLtJ_G0023825.1 mouse_genomes_project 17 79173357 79286755 + MGP_NODShiLtJ_P0048190 Myom1 protein_coding protein_coding MGP_NODShiLtJ_T0048191.1 MGP_NODShiLtJ_G0023825.1 mouse_genomes_project 17 79173404 79286756 + MGP_NODShiLtJ_P0048191 Myom1 protein_coding protein_coding MGP_NODShiLtJ_T0048192.1 MGP_NODShiLtJ_G0023825.1 mouse_genomes_project 17 79173404 79286756 + MGP_NODShiLtJ_P0048192 Myom1 protein_coding protein_coding MGP_NODShiLtJ_T0045374.1 MGP_NODShiLtJ_G0023013.1 mouse_genomes_project 17 16877207 16878116 - MGP_NODShiLtJ_P0045374 Gm7535 protein_coding protein_coding MGP_NODShiLtJ_T0010130.1 MGP_NODShiLtJ_G0008263.1 mouse_genomes_project 17 100911223 100911307 + miRNA miRNA MGP_NODShiLtJ_T0046715.1 MGP_NODShiLtJ_G0023377.1 mouse_genomes_project 17 35755141 35784368 + MGP_NODShiLtJ_P0046715 Col11a2 protein_coding protein_coding MGP_NODShiLtJ_T0046716.1 MGP_NODShiLtJ_G0023377.1 mouse_genomes_project 17 35755141 35783925 + MGP_NODShiLtJ_P0046716 Col11a2 protein_coding protein_coding MGP_NODShiLtJ_T0046717.1 MGP_NODShiLtJ_G0023377.1 mouse_genomes_project 17 35755141 35783925 + MGP_NODShiLtJ_P0046717 Col11a2 protein_coding protein_coding MGP_NODShiLtJ_T0046718.1 MGP_NODShiLtJ_G0023377.1 mouse_genomes_project 17 35755141 35770181 + MGP_NODShiLtJ_P0046718 Col11a2 protein_coding protein_coding MGP_NODShiLtJ_T0046719.1 MGP_NODShiLtJ_G0023377.1 mouse_genomes_project 17 35764055 35777637 + MGP_NODShiLtJ_P0046719 Col11a2 protein_coding protein_coding MGP_NODShiLtJ_T0046720.1 MGP_NODShiLtJ_G0023377.1 mouse_genomes_project 17 35769970 35771997 + Col11a2 protein_coding processed_transcript MGP_NODShiLtJ_T0046721.1 MGP_NODShiLtJ_G0023377.1 mouse_genomes_project 17 35772748 35774120 + Col11a2 protein_coding retained_intron MGP_NODShiLtJ_T0046722.1 MGP_NODShiLtJ_G0023377.1 mouse_genomes_project 17 35780101 35782476 + Col11a2 protein_coding retained_intron MGP_NODShiLtJ_T0047942.1 MGP_NODShiLtJ_G0023738.1 mouse_genomes_project 17 61944742 61956139 + MGP_NODShiLtJ_P0047942 Tnfaip8l1 protein_coding protein_coding MGP_NODShiLtJ_T0013116.1 MGP_NODShiLtJ_G0011224.1 mouse_genomes_project 17 36378427 36378834 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100253.1 MGP_NODShiLtJ_G0038647.1 mouse_genomes_project 17 36853928 36853991 - Gm25744 snoRNA snoRNA MGP_NODShiLtJ_T0047017.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37038229 37044514 - MGP_NODShiLtJ_P0047017 Csnk2b protein_coding protein_coding MGP_NODShiLtJ_T0047018.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37038231 37044371 - MGP_NODShiLtJ_P0047018 Csnk2b protein_coding protein_coding MGP_NODShiLtJ_T0047019.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37038231 37042860 - MGP_NODShiLtJ_P0047019 Csnk2b protein_coding protein_coding MGP_NODShiLtJ_T0047020.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37038233 37044258 - MGP_NODShiLtJ_P0047020 Csnk2b protein_coding protein_coding MGP_NODShiLtJ_T0047021.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37038275 37041157 - MGP_NODShiLtJ_P0047021 Csnk2b protein_coding protein_coding MGP_NODShiLtJ_T0047022.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37040779 37041866 - Csnk2b protein_coding retained_intron MGP_NODShiLtJ_T0047023.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37040780 37045138 - MGP_NODShiLtJ_P0047023 Csnk2b protein_coding protein_coding MGP_NODShiLtJ_T0047024.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37041079 37044115 - MGP_NODShiLtJ_P0047024 Csnk2b protein_coding protein_coding MGP_NODShiLtJ_T0047025.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37042838 37045083 - MGP_NODShiLtJ_P0047025 Csnk2b protein_coding protein_coding MGP_NODShiLtJ_T0047026.1 MGP_NODShiLtJ_G0023441.1 mouse_genomes_project 17 37043602 37044521 - Csnk2b protein_coding retained_intron MGP_NODShiLtJ_T0046370.1 MGP_NODShiLtJ_G0023295.1 mouse_genomes_project 17 32159983 32197619 + MGP_NODShiLtJ_P0046370 Glp1r protein_coding protein_coding MGP_NODShiLtJ_T0047424.1 MGP_NODShiLtJ_G0023575.1 mouse_genomes_project 17 43663321 43664913 - MGP_NODShiLtJ_P0047424 Pgk2 protein_coding protein_coding MGP_NODShiLtJ_T0047453.1 MGP_NODShiLtJ_G0023595.1 mouse_genomes_project 17 47118192 47197261 + MGP_NODShiLtJ_P0047453 Tnfrsf21 protein_coding protein_coding MGP_NODShiLtJ_T0046814.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411193 36414264 + MGP_NODShiLtJ_P0046814 Ager protein_coding protein_coding MGP_NODShiLtJ_T0046815.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411193 36414268 + MGP_NODShiLtJ_P0046815 Ager protein_coding protein_coding MGP_NODShiLtJ_T0046816.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411206 36414239 + Ager protein_coding processed_transcript MGP_NODShiLtJ_T0046817.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411206 36414239 + Ager protein_coding retained_intron MGP_NODShiLtJ_T0046818.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414192 + Ager protein_coding retained_intron MGP_NODShiLtJ_T0046819.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414192 + Ager protein_coding retained_intron MGP_NODShiLtJ_T0046820.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414192 + Ager protein_coding retained_intron MGP_NODShiLtJ_T0046821.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414228 + Ager protein_coding retained_intron MGP_NODShiLtJ_T0046822.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414192 + Ager protein_coding retained_intron MGP_NODShiLtJ_T0046823.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414192 + Ager protein_coding retained_intron MGP_NODShiLtJ_T0046824.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414192 + Ager protein_coding retained_intron MGP_NODShiLtJ_T0046825.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414228 + MGP_NODShiLtJ_P0046825 Ager protein_coding protein_coding MGP_NODShiLtJ_T0046826.1 MGP_NODShiLtJ_G0023401.1 mouse_genomes_project 17 36411225 36414228 + MGP_NODShiLtJ_P0046826 Ager protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045388.1 MGP_NODShiLtJ_G0023025.1 mouse_genomes_project 17 19713726 19740667 - MGP_NODShiLtJ_P0045388 protein_coding protein_coding MGP_NODShiLtJ_T0011700.1 MGP_NODShiLtJ_G0009824.1 mouse_genomes_project 17 23997877 24000451 - MGP_NODShiLtJ_P0011700 Casp16-ps polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0011701.1 MGP_NODShiLtJ_G0009824.1 mouse_genomes_project 17 23997985 24000373 - MGP_NODShiLtJ_P0011701 Casp16-ps polymorphic_pseudogene protein_coding MGP_NODShiLtJ_T0045886.1 MGP_NODShiLtJ_G0023188.1 mouse_genomes_project 17 26483529 26495669 + MGP_NODShiLtJ_P0045886 Fbxl16 protein_coding protein_coding MGP_NODShiLtJ_T0047336.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39266832 39279203 + MGP_NODShiLtJ_P0047336 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047337.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269317 39278013 + MGP_NODShiLtJ_P0047337 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047338.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269360 39279203 + MGP_NODShiLtJ_P0047338 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047339.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269389 39274654 + MGP_NODShiLtJ_P0047339 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047340.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269404 39270652 + Zfp57 protein_coding retained_intron MGP_NODShiLtJ_T0047341.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269412 39270530 + Zfp57 protein_coding retained_intron MGP_NODShiLtJ_T0047342.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269431 39278394 + MGP_NODShiLtJ_P0047342 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047343.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269447 39274639 + MGP_NODShiLtJ_P0047343 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047344.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269505 39278317 + MGP_NODShiLtJ_P0047344 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047345.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39269873 39279206 + MGP_NODShiLtJ_P0047345 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047346.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39270501 39279203 + MGP_NODShiLtJ_P0047346 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047347.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39271359 39278286 + MGP_NODShiLtJ_P0047347 Zfp57 protein_coding protein_coding MGP_NODShiLtJ_T0047348.1 MGP_NODShiLtJ_G0023518.1 mouse_genomes_project 17 39271440 39274821 + Zfp57 protein_coding retained_intron MGP_NODShiLtJ_T0100257.1 MGP_NODShiLtJ_G0038651.1 mouse_genomes_project 17 39100733 39100860 - Gm25973 snoRNA snoRNA MGP_NODShiLtJ_T0047797.1 MGP_NODShiLtJ_G0023687.1 mouse_genomes_project 17 52835619 52858953 - MGP_NODShiLtJ_P0047797 protein_coding protein_coding MGP_NODShiLtJ_T0000958.1 MGP_NODShiLtJ_G0000885.1 mouse_genomes_project 17 9262044 9264858 - TEC TEC MGP_NODShiLtJ_T0099014.1 MGP_NODShiLtJ_G0037408.1 mouse_genomes_project 17 89672943 89673049 + Gm23125 snRNA snRNA MGP_NODShiLtJ_T0047599.1 MGP_NODShiLtJ_G0023630.1 mouse_genomes_project 17 50624975 50667512 + MGP_NODShiLtJ_P0047599 Xpo5 protein_coding protein_coding MGP_NODShiLtJ_T0047817.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53128305 53151918 - MGP_NODShiLtJ_P0047817 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047818.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53128309 53152059 - MGP_NODShiLtJ_P0047818 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047819.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53128316 53151918 - MGP_NODShiLtJ_P0047819 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047820.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53130427 53141967 - MGP_NODShiLtJ_P0047820 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047821.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53130503 53151883 - MGP_NODShiLtJ_P0047821 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047822.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53130531 53134646 - MGP_NODShiLtJ_P0047822 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047823.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53130646 53134882 - MGP_NODShiLtJ_P0047823 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047824.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53132302 53133568 - Nfya protein_coding retained_intron MGP_NODShiLtJ_T0047825.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53133438 53140461 - MGP_NODShiLtJ_P0047825 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047826.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53133466 53151894 - MGP_NODShiLtJ_P0047826 Nfya protein_coding protein_coding MGP_NODShiLtJ_T0047827.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53134640 53137477 - Nfya protein_coding retained_intron MGP_NODShiLtJ_T0047828.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53136785 53151841 - Nfya protein_coding retained_intron MGP_NODShiLtJ_T0047829.1 MGP_NODShiLtJ_G0023695.1 mouse_genomes_project 17 53139349 53151903 - Nfya protein_coding retained_intron MGP_NODShiLtJ_T0048183.1 MGP_NODShiLtJ_G0023824.1 mouse_genomes_project 17 79148200 79157013 - MGP_NODShiLtJ_P0048183 Myl12a protein_coding protein_coding MGP_NODShiLtJ_T0048184.1 MGP_NODShiLtJ_G0023824.1 mouse_genomes_project 17 79148839 79156624 - Myl12a protein_coding retained_intron MGP_NODShiLtJ_T0048185.1 MGP_NODShiLtJ_G0023824.1 mouse_genomes_project 17 79148839 79152477 - MGP_NODShiLtJ_P0048185 Myl12a protein_coding protein_coding MGP_NODShiLtJ_T0048186.1 MGP_NODShiLtJ_G0023824.1 mouse_genomes_project 17 79149094 79157337 - MGP_NODShiLtJ_P0048186 Myl12a protein_coding protein_coding MGP_NODShiLtJ_T0048187.1 MGP_NODShiLtJ_G0023824.1 mouse_genomes_project 17 79150677 79156646 - MGP_NODShiLtJ_P0048187 Myl12a protein_coding protein_coding MGP_NODShiLtJ_T0048188.1 MGP_NODShiLtJ_G0023824.1 mouse_genomes_project 17 79150928 79156619 - Myl12a protein_coding retained_intron MGP_NODShiLtJ_T0048189.1 MGP_NODShiLtJ_G0023824.1 mouse_genomes_project 17 79151249 79156477 - MGP_NODShiLtJ_P0048189 Myl12a protein_coding protein_coding MGP_NODShiLtJ_T0048362.1 MGP_NODShiLtJ_G0023891.1 mouse_genomes_project 17 91146450 91146611 + MGP_NODShiLtJ_P0048362 Gm11096 protein_coding protein_coding MGP_NODShiLtJ_T0047830.1 MGP_NODShiLtJ_G0023696.1 mouse_genomes_project 17 53152166 53160580 + MGP_NODShiLtJ_P0047830 Oard1 protein_coding protein_coding MGP_NODShiLtJ_T0047831.1 MGP_NODShiLtJ_G0023696.1 mouse_genomes_project 17 53152232 53160592 + MGP_NODShiLtJ_P0047831 Oard1 protein_coding protein_coding MGP_NODShiLtJ_T0006886.1 MGP_NODShiLtJ_G0005664.1 mouse_genomes_project 17 38040820 38042699 + Gm20508 lincRNA lincRNA MGP_NODShiLtJ_T0045549.1 MGP_NODShiLtJ_G0023106.1 mouse_genomes_project 17 24586344 24611793 - MGP_NODShiLtJ_P0045549 Kctd5 protein_coding protein_coding MGP_NODShiLtJ_T0045550.1 MGP_NODShiLtJ_G0023106.1 mouse_genomes_project 17 24594344 24606597 - Kctd5 protein_coding processed_transcript MGP_NODShiLtJ_T0045622.1 MGP_NODShiLtJ_G0023123.1 mouse_genomes_project 17 25080673 25101947 + MGP_NODShiLtJ_P0045622 Caskin1 protein_coding protein_coding MGP_NODShiLtJ_T0046945.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893668 36895787 + Lsm2 protein_coding retained_intron MGP_NODShiLtJ_T0046946.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893686 36897695 + MGP_NODShiLtJ_P0046946 Lsm2 protein_coding protein_coding MGP_NODShiLtJ_T0046947.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893717 36897475 + Lsm2 protein_coding processed_transcript MGP_NODShiLtJ_T0046948.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893927 36897397 + Lsm2 protein_coding processed_transcript MGP_NODShiLtJ_T0046949.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893935 36897695 + MGP_NODShiLtJ_P0046949 Lsm2 protein_coding protein_coding MGP_NODShiLtJ_T0046950.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893965 36897693 + Lsm2 protein_coding processed_transcript MGP_NODShiLtJ_T0046951.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893965 36897638 + Lsm2 protein_coding processed_transcript MGP_NODShiLtJ_T0046952.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893965 36897693 + MGP_NODShiLtJ_P0046952 Lsm2 protein_coding protein_coding MGP_NODShiLtJ_T0046953.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36893975 36897302 + Lsm2 protein_coding retained_intron MGP_NODShiLtJ_T0046954.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36894015 36897302 + Lsm2 protein_coding retained_intron MGP_NODShiLtJ_T0046955.1 MGP_NODShiLtJ_G0023426.1 mouse_genomes_project 17 36896414 36897694 + Lsm2 protein_coding retained_intron MGP_NODShiLtJ_T0046437.1 MGP_NODShiLtJ_G0023311.1 mouse_genomes_project 17 33059232 33063027 + MGP_NODShiLtJ_P0046437 Cryaa protein_coding protein_coding MGP_NODShiLtJ_T0099016.1 MGP_NODShiLtJ_G0037410.1 mouse_genomes_project 17 94496987 94497094 + Gm24722 snRNA snRNA MGP_NODShiLtJ_T0047901.1 MGP_NODShiLtJ_G0023718.1 mouse_genomes_project 17 61110809 61152381 + MGP_NODShiLtJ_P0047901 St6gal2 protein_coding protein_coding MGP_NODShiLtJ_T0047902.1 MGP_NODShiLtJ_G0023718.1 mouse_genomes_project 17 61110816 61170407 + MGP_NODShiLtJ_P0047902 St6gal2 protein_coding protein_coding MGP_NODShiLtJ_T0047903.1 MGP_NODShiLtJ_G0023718.1 mouse_genomes_project 17 61111671 61151717 + St6gal2 protein_coding processed_transcript MGP_NODShiLtJ_T0047904.1 MGP_NODShiLtJ_G0023718.1 mouse_genomes_project 17 61128951 61188687 + MGP_NODShiLtJ_P0047904 St6gal2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046351.1 MGP_NODShiLtJ_G0023289.1 mouse_genomes_project 17 30852403 30880083 - MGP_NODShiLtJ_P0046351 Ccdc167 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046352.1 MGP_NODShiLtJ_G0023289.1 mouse_genomes_project 17 30860648 30880059 - MGP_NODShiLtJ_P0046352 Ccdc167 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046353.1 MGP_NODShiLtJ_G0023289.1 mouse_genomes_project 17 30861394 30880083 - MGP_NODShiLtJ_P0046353 Ccdc167 protein_coding protein_coding MGP_NODShiLtJ_T0046354.1 MGP_NODShiLtJ_G0023289.1 mouse_genomes_project 17 30863072 30880037 - MGP_NODShiLtJ_P0046354 Ccdc167 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046355.1 MGP_NODShiLtJ_G0023289.1 mouse_genomes_project 17 30866405 30880086 - MGP_NODShiLtJ_P0046355 Ccdc167 protein_coding protein_coding MGP_NODShiLtJ_T0046356.1 MGP_NODShiLtJ_G0023289.1 mouse_genomes_project 17 30876059 30880038 - Ccdc167 protein_coding processed_transcript MGP_NODShiLtJ_T0045507.1 MGP_NODShiLtJ_G0023090.1 mouse_genomes_project 17 24247813 24261000 - MGP_NODShiLtJ_P0045507 Flywch2 protein_coding protein_coding MGP_NODShiLtJ_T0045508.1 MGP_NODShiLtJ_G0023090.1 mouse_genomes_project 17 24247856 24250693 - MGP_NODShiLtJ_P0045508 Flywch2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045509.1 MGP_NODShiLtJ_G0023090.1 mouse_genomes_project 17 24247889 24260971 - MGP_NODShiLtJ_P0045509 Flywch2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046626.1 MGP_NODShiLtJ_G0023362.1 mouse_genomes_project 17 35553490 35570476 - MGP_NODShiLtJ_P0046626 protein_coding protein_coding MGP_NODShiLtJ_T0046627.1 MGP_NODShiLtJ_G0023362.1 mouse_genomes_project 17 35553492 35570448 - MGP_NODShiLtJ_P0046627 protein_coding protein_coding MGP_NODShiLtJ_T0046628.1 MGP_NODShiLtJ_G0023362.1 mouse_genomes_project 17 35559833 35570446 - protein_coding retained_intron MGP_NODShiLtJ_T0046629.1 MGP_NODShiLtJ_G0023362.1 mouse_genomes_project 17 35560294 35570419 - protein_coding retained_intron MGP_NODShiLtJ_T0046630.1 MGP_NODShiLtJ_G0023362.1 mouse_genomes_project 17 35563872 35570354 - MGP_NODShiLtJ_P0046630 protein_coding protein_coding MGP_NODShiLtJ_T0046631.1 MGP_NODShiLtJ_G0023362.1 mouse_genomes_project 17 35565429 35570411 - protein_coding retained_intron MGP_NODShiLtJ_T0013133.1 MGP_NODShiLtJ_G0011241.1 mouse_genomes_project 17 40399797 40400734 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047581.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50571370 50583183 + MGP_NODShiLtJ_P0047581 Gtpbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047582.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50571370 50583185 + MGP_NODShiLtJ_P0047582 Gtpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0047583.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50571387 50577323 + Gtpbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0047584.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50571404 50583151 + MGP_NODShiLtJ_P0047584 Gtpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0047585.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50574927 50578127 + MGP_NODShiLtJ_P0047585 Gtpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0047586.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50574977 50575974 + Gtpbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0047587.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50575111 50578570 + Gtpbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0047588.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50576850 50578641 + Gtpbp2 protein_coding retained_intron MGP_NODShiLtJ_T0047589.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50577043 50579613 + Gtpbp2 protein_coding processed_transcript MGP_NODShiLtJ_T0047590.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50577135 50579008 + Gtpbp2 protein_coding retained_intron MGP_NODShiLtJ_T0047591.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50579513 50581695 + Gtpbp2 protein_coding retained_intron MGP_NODShiLtJ_T0047592.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50579595 50581145 + Gtpbp2 protein_coding retained_intron MGP_NODShiLtJ_T0047593.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50580248 50582047 + MGP_NODShiLtJ_P0047593 Gtpbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047594.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50580679 50581834 + Gtpbp2 protein_coding retained_intron MGP_NODShiLtJ_T0047595.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50580800 50582024 + Gtpbp2 protein_coding retained_intron MGP_NODShiLtJ_T0047596.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50581043 50582207 + MGP_NODShiLtJ_P0047596 Gtpbp2 protein_coding protein_coding MGP_NODShiLtJ_T0047597.1 MGP_NODShiLtJ_G0023628.1 mouse_genomes_project 17 50581448 50582223 + Gtpbp2 protein_coding retained_intron MGP_NODShiLtJ_T0047375.1 MGP_NODShiLtJ_G0023534.1 mouse_genomes_project 17 39647850 39649990 - MGP_NODShiLtJ_P0047375 protein_coding protein_coding MGP_NODShiLtJ_T0045422.1 MGP_NODShiLtJ_G0023050.1 mouse_genomes_project 17 21466002 21482218 + MGP_NODShiLtJ_P0045422 Zfp51 protein_coding protein_coding MGP_NODShiLtJ_T0013153.1 MGP_NODShiLtJ_G0011261.1 mouse_genomes_project 17 59054453 59057905 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045981.1 MGP_NODShiLtJ_G0023207.1 mouse_genomes_project 17 26786365 26791453 - MGP_NODShiLtJ_P0045981 Nme4 protein_coding protein_coding MGP_NODShiLtJ_T0045982.1 MGP_NODShiLtJ_G0023207.1 mouse_genomes_project 17 26789363 26791418 - Nme4 protein_coding retained_intron MGP_NODShiLtJ_T0047660.1 MGP_NODShiLtJ_G0023645.1 mouse_genomes_project 17 51020159 51096111 - MGP_NODShiLtJ_P0047660 Ptk7 protein_coding protein_coding MGP_NODShiLtJ_T0046691.1 MGP_NODShiLtJ_G0023374.1 mouse_genomes_project 17 35741575 35742641 - H2-Ke6 protein_coding retained_intron MGP_NODShiLtJ_T0046692.1 MGP_NODShiLtJ_G0023374.1 mouse_genomes_project 17 35741575 35742298 - H2-Ke6 protein_coding retained_intron MGP_NODShiLtJ_T0046693.1 MGP_NODShiLtJ_G0023374.1 mouse_genomes_project 17 35741575 35743598 - MGP_NODShiLtJ_P0046693 H2-Ke6 protein_coding protein_coding MGP_NODShiLtJ_T0046694.1 MGP_NODShiLtJ_G0023374.1 mouse_genomes_project 17 35741578 35743588 - H2-Ke6 protein_coding retained_intron MGP_NODShiLtJ_T0046695.1 MGP_NODShiLtJ_G0023374.1 mouse_genomes_project 17 35741699 35742495 - H2-Ke6 protein_coding retained_intron MGP_NODShiLtJ_T0046696.1 MGP_NODShiLtJ_G0023374.1 mouse_genomes_project 17 35741950 35743405 - H2-Ke6 protein_coding processed_transcript MGP_NODShiLtJ_T0046697.1 MGP_NODShiLtJ_G0023374.1 mouse_genomes_project 17 35742211 35743602 - MGP_NODShiLtJ_P0046697 H2-Ke6 protein_coding protein_coding MGP_NODShiLtJ_T0046698.1 MGP_NODShiLtJ_G0023374.1 mouse_genomes_project 17 35742456 35743580 - H2-Ke6 protein_coding retained_intron MGP_NODShiLtJ_T0045567.1 MGP_NODShiLtJ_G0023110.1 mouse_genomes_project 17 24708222 24711277 - Atp6v0c protein_coding processed_transcript MGP_NODShiLtJ_T0045568.1 MGP_NODShiLtJ_G0023110.1 mouse_genomes_project 17 24708222 24713715 - MGP_NODShiLtJ_P0045568 Atp6v0c protein_coding protein_coding MGP_NODShiLtJ_T0045569.1 MGP_NODShiLtJ_G0023110.1 mouse_genomes_project 17 24708509 24713931 - MGP_NODShiLtJ_P0045569 Atp6v0c protein_coding protein_coding MGP_NODShiLtJ_T0045570.1 MGP_NODShiLtJ_G0023110.1 mouse_genomes_project 17 24708776 24713902 - MGP_NODShiLtJ_P0045570 Atp6v0c protein_coding protein_coding MGP_NODShiLtJ_T0045571.1 MGP_NODShiLtJ_G0023110.1 mouse_genomes_project 17 24708894 24713320 - Atp6v0c protein_coding processed_transcript MGP_NODShiLtJ_T0045572.1 MGP_NODShiLtJ_G0023110.1 mouse_genomes_project 17 24708898 24713956 - MGP_NODShiLtJ_P0045572 Atp6v0c protein_coding protein_coding MGP_NODShiLtJ_T0045609.1 MGP_NODShiLtJ_G0023118.1 mouse_genomes_project 17 25014299 25017709 - Dnase1l2 protein_coding retained_intron MGP_NODShiLtJ_T0045610.1 MGP_NODShiLtJ_G0023118.1 mouse_genomes_project 17 25014305 25018613 - MGP_NODShiLtJ_P0045610 Dnase1l2 protein_coding protein_coding MGP_NODShiLtJ_T0045611.1 MGP_NODShiLtJ_G0023118.1 mouse_genomes_project 17 25016100 25018592 - MGP_NODShiLtJ_P0045611 Dnase1l2 protein_coding protein_coding MGP_NODShiLtJ_T0045612.1 MGP_NODShiLtJ_G0023118.1 mouse_genomes_project 17 25016291 25017661 - MGP_NODShiLtJ_P0045612 Dnase1l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045613.1 MGP_NODShiLtJ_G0023118.1 mouse_genomes_project 17 25017029 25018209 - MGP_NODShiLtJ_P0045613 Dnase1l2 protein_coding protein_coding MGP_NODShiLtJ_T0045614.1 MGP_NODShiLtJ_G0023118.1 mouse_genomes_project 17 25017227 25018612 - MGP_NODShiLtJ_P0045614 Dnase1l2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047062.1 MGP_NODShiLtJ_G0023448.1 mouse_genomes_project 17 37116076 37120438 - MGP_NODShiLtJ_P0047062 Lst1 protein_coding protein_coding MGP_NODShiLtJ_T0048295.1 MGP_NODShiLtJ_G0023857.1 mouse_genomes_project 17 87796382 87836542 - MGP_NODShiLtJ_P0048295 protein_coding protein_coding MGP_NODShiLtJ_T0048296.1 MGP_NODShiLtJ_G0023857.1 mouse_genomes_project 17 87796382 87836542 - MGP_NODShiLtJ_P0048296 protein_coding protein_coding MGP_NODShiLtJ_T0013145.1 MGP_NODShiLtJ_G0011253.1 mouse_genomes_project 17 52533459 52533816 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046858.1 MGP_NODShiLtJ_G0023408.1 mouse_genomes_project 17 36464227 36472159 + MGP_NODShiLtJ_P0046858 Atf6b protein_coding protein_coding MGP_NODShiLtJ_T0046859.1 MGP_NODShiLtJ_G0023408.1 mouse_genomes_project 17 36464282 36466229 + MGP_NODShiLtJ_P0046859 Atf6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046860.1 MGP_NODShiLtJ_G0023408.1 mouse_genomes_project 17 36464282 36466284 + MGP_NODShiLtJ_P0046860 Atf6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046861.1 MGP_NODShiLtJ_G0023408.1 mouse_genomes_project 17 36464292 36471964 + MGP_NODShiLtJ_P0046861 Atf6b protein_coding protein_coding MGP_NODShiLtJ_T0046862.1 MGP_NODShiLtJ_G0023408.1 mouse_genomes_project 17 36468710 36469187 + Atf6b protein_coding retained_intron MGP_NODShiLtJ_T0048315.1 MGP_NODShiLtJ_G0023866.1 mouse_genomes_project 17 88393873 88412226 - MGP_NODShiLtJ_P0048315 Cebpz protein_coding protein_coding MGP_NODShiLtJ_T0006908.1 MGP_NODShiLtJ_G0005677.1 mouse_genomes_project 17 61721519 61726130 - Gm16712 lincRNA lincRNA MGP_NODShiLtJ_T0045314.1 MGP_NODShiLtJ_G0022997.1 mouse_genomes_project 17 13799487 13808899 - MGP_NODShiLtJ_P0045314 Dll1 protein_coding protein_coding MGP_NODShiLtJ_T0045315.1 MGP_NODShiLtJ_G0022997.1 mouse_genomes_project 17 13799658 13800524 - Dll1 protein_coding retained_intron MGP_NODShiLtJ_T0045316.1 MGP_NODShiLtJ_G0022997.1 mouse_genomes_project 17 13802388 13804754 - Dll1 protein_coding processed_transcript MGP_NODShiLtJ_T0045317.1 MGP_NODShiLtJ_G0022997.1 mouse_genomes_project 17 13802741 13806995 - Dll1 protein_coding processed_transcript MGP_NODShiLtJ_T0045318.1 MGP_NODShiLtJ_G0022997.1 mouse_genomes_project 17 13804546 13808023 - Dll1 protein_coding retained_intron MGP_NODShiLtJ_T0045319.1 MGP_NODShiLtJ_G0022997.1 mouse_genomes_project 17 13807716 13811102 - Dll1 protein_coding processed_transcript MGP_NODShiLtJ_T0010105.1 MGP_NODShiLtJ_G0008238.1 mouse_genomes_project 17 36731308 36731371 - Mir6971 miRNA miRNA MGP_NODShiLtJ_T0101298.1 MGP_NODShiLtJ_G0039562.1 mouse_genomes_project 17 36263357 36272088 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101299.1 MGP_NODShiLtJ_G0039562.1 mouse_genomes_project 17 36267809 36269544 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101300.1 MGP_NODShiLtJ_G0039562.1 mouse_genomes_project 17 36272005 36274148 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101742.1 MGP_NODShiLtJ_G0039910.1 mouse_genomes_project 17 38424386 38424492 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045427.1 MGP_NODShiLtJ_G0023055.1 mouse_genomes_project 17 21752880 21753139 + MGP_NODShiLtJ_P0045427 Gm10509 protein_coding protein_coding MGP_NODShiLtJ_T0045824.1 MGP_NODShiLtJ_G0023171.1 mouse_genomes_project 17 26011425 26012970 + MGP_NODShiLtJ_P0045824 Tpsb2 protein_coding protein_coding MGP_NODShiLtJ_T0101686.1 MGP_NODShiLtJ_G0039855.1 mouse_genomes_project 17 17677645 17678925 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046527.1 MGP_NODShiLtJ_G0023336.1 mouse_genomes_project 17 34503140 34508703 + Zfp952 protein_coding processed_transcript MGP_NODShiLtJ_T0046528.1 MGP_NODShiLtJ_G0023336.1 mouse_genomes_project 17 34503208 34518110 + Zfp952 protein_coding processed_transcript MGP_NODShiLtJ_T0046529.1 MGP_NODShiLtJ_G0023336.1 mouse_genomes_project 17 34503208 34518110 + MGP_NODShiLtJ_P0046529 Zfp952 protein_coding protein_coding MGP_NODShiLtJ_T0046530.1 MGP_NODShiLtJ_G0023336.1 mouse_genomes_project 17 34503212 34515739 + MGP_NODShiLtJ_P0046530 Zfp952 protein_coding protein_coding MGP_NODShiLtJ_T0045377.1 MGP_NODShiLtJ_G0023015.1 mouse_genomes_project 17 17091111 18778607 + MGP_NODShiLtJ_P0045377 protein_coding protein_coding MGP_NODShiLtJ_T0047862.1 MGP_NODShiLtJ_G0023704.1 mouse_genomes_project 17 54826084 55030906 - MGP_NODShiLtJ_P0047862 Rftn1 protein_coding protein_coding MGP_NODShiLtJ_T0047863.1 MGP_NODShiLtJ_G0023704.1 mouse_genomes_project 17 54870968 55030980 - Rftn1 protein_coding retained_intron MGP_NODShiLtJ_T0045521.1 MGP_NODShiLtJ_G0023093.1 mouse_genomes_project 17 24311050 24313434 - MGP_NODShiLtJ_P0045521 Prss33 protein_coding protein_coding MGP_NODShiLtJ_T0045522.1 MGP_NODShiLtJ_G0023093.1 mouse_genomes_project 17 24311430 24313430 - MGP_NODShiLtJ_P0045522 Prss33 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045523.1 MGP_NODShiLtJ_G0023093.1 mouse_genomes_project 17 24312358 24313747 - Prss33 protein_coding retained_intron MGP_NODShiLtJ_T0046143.1 MGP_NODShiLtJ_G0023246.1 mouse_genomes_project 17 28780509 28827294 + MGP_NODShiLtJ_P0046143 Uhrf1bp1 protein_coding protein_coding MGP_NODShiLtJ_T0046144.1 MGP_NODShiLtJ_G0023246.1 mouse_genomes_project 17 28781262 28806078 + Uhrf1bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0046145.1 MGP_NODShiLtJ_G0023246.1 mouse_genomes_project 17 28816350 28822620 + Uhrf1bp1 protein_coding processed_transcript MGP_NODShiLtJ_T0047508.1 MGP_NODShiLtJ_G0023616.1 mouse_genomes_project 17 49886736 49890350 + MGP_NODShiLtJ_P0047508 Slc35b2 protein_coding protein_coding MGP_NODShiLtJ_T0003717.1 MGP_NODShiLtJ_G0003340.1 mouse_genomes_project 17 52263011 52266481 + Tomm6os antisense antisense MGP_NODShiLtJ_T0048005.1 MGP_NODShiLtJ_G0023760.1 mouse_genomes_project 17 62613712 62615671 + Prr22 protein_coding retained_intron MGP_NODShiLtJ_T0048006.1 MGP_NODShiLtJ_G0023760.1 mouse_genomes_project 17 62613738 62615597 + MGP_NODShiLtJ_P0048006 Prr22 protein_coding protein_coding MGP_NODShiLtJ_T0011314.1 MGP_NODShiLtJ_G0009447.1 mouse_genomes_project 17 38430260 38430557 - Gm22453 misc_RNA misc_RNA MGP_NODShiLtJ_T0047995.1 MGP_NODShiLtJ_G0023751.1 mouse_genomes_project 17 62434063 62436371 - MGP_NODShiLtJ_P0047995 2410015M20Rik protein_coding protein_coding MGP_NODShiLtJ_T0100271.1 MGP_NODShiLtJ_G0038665.1 mouse_genomes_project 17 97368460 97368592 - Gm24648 snoRNA snoRNA MGP_NODShiLtJ_T0047452.1 MGP_NODShiLtJ_G0023594.1 mouse_genomes_project 17 46848474 46950081 - MGP_NODShiLtJ_P0047452 Cd2ap protein_coding protein_coding MGP_NODShiLtJ_T0101760.1 MGP_NODShiLtJ_G0039928.1 mouse_genomes_project 17 39618195 39619123 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045231.1 MGP_NODShiLtJ_G0022972.1 mouse_genomes_project 17 10635492 10685513 + MGP_NODShiLtJ_P0045231 Slc22a2 protein_coding protein_coding MGP_NODShiLtJ_T0101734.1 MGP_NODShiLtJ_G0039903.1 mouse_genomes_project 17 38086860 38106012 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101719.1 MGP_NODShiLtJ_G0039888.1 mouse_genomes_project 17 35802249 35803404 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101689.1 MGP_NODShiLtJ_G0039858.1 mouse_genomes_project 17 18045875 18046001 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045820.1 MGP_NODShiLtJ_G0023168.1 mouse_genomes_project 17 25946325 25949562 + MGP_NODShiLtJ_P0045820 Prss28 protein_coding protein_coding MGP_NODShiLtJ_T0047440.1 MGP_NODShiLtJ_G0023587.1 mouse_genomes_project 17 44565344 44575639 - MGP_NODShiLtJ_P0047440 Glyatl3 protein_coding protein_coding MGP_NODShiLtJ_T0013117.1 MGP_NODShiLtJ_G0011225.1 mouse_genomes_project 17 37556507 37556702 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010085.1 MGP_NODShiLtJ_G0008218.1 mouse_genomes_project 17 26414952 26415044 - Gm25083 miRNA miRNA MGP_NODShiLtJ_T0010110.1 MGP_NODShiLtJ_G0008243.1 mouse_genomes_project 17 37180318 37180379 + Mir6975 miRNA miRNA MGP_NODShiLtJ_T0047396.1 MGP_NODShiLtJ_G0023551.1 mouse_genomes_project 17 40192309 40218982 + MGP_NODShiLtJ_P0047396 protein_coding protein_coding MGP_NODShiLtJ_T0046053.1 MGP_NODShiLtJ_G0023224.1 mouse_genomes_project 17 27540059 27544905 + Bnip1 protein_coding retained_intron MGP_NODShiLtJ_T0046054.1 MGP_NODShiLtJ_G0023224.1 mouse_genomes_project 17 27540068 27544906 + Bnip1 protein_coding retained_intron MGP_NODShiLtJ_T0046055.1 MGP_NODShiLtJ_G0023224.1 mouse_genomes_project 17 27540070 27552483 + MGP_NODShiLtJ_P0046055 Bnip1 protein_coding protein_coding MGP_NODShiLtJ_T0046056.1 MGP_NODShiLtJ_G0023224.1 mouse_genomes_project 17 27540070 27552135 + MGP_NODShiLtJ_P0046056 Bnip1 protein_coding protein_coding MGP_NODShiLtJ_T0046057.1 MGP_NODShiLtJ_G0023224.1 mouse_genomes_project 17 27540098 27552474 + MGP_NODShiLtJ_P0046057 Bnip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046058.1 MGP_NODShiLtJ_G0023224.1 mouse_genomes_project 17 27540112 27552031 + MGP_NODShiLtJ_P0046058 Bnip1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046059.1 MGP_NODShiLtJ_G0023224.1 mouse_genomes_project 17 27546356 27549962 + Bnip1 protein_coding retained_intron MGP_NODShiLtJ_T0046060.1 MGP_NODShiLtJ_G0023224.1 mouse_genomes_project 17 27550728 27552519 + Bnip1 protein_coding retained_intron MGP_NODShiLtJ_T0048367.1 MGP_NODShiLtJ_G0023893.1 mouse_genomes_project 17 93351013 93491091 + MGP_NODShiLtJ_P0048367 Eml4 protein_coding protein_coding MGP_NODShiLtJ_T0048368.1 MGP_NODShiLtJ_G0023893.1 mouse_genomes_project 17 93351013 93491091 + MGP_NODShiLtJ_P0048368 Eml4 protein_coding protein_coding MGP_NODShiLtJ_T0048369.1 MGP_NODShiLtJ_G0023893.1 mouse_genomes_project 17 93351013 93491091 + MGP_NODShiLtJ_P0048369 Eml4 protein_coding protein_coding MGP_NODShiLtJ_T0046622.1 MGP_NODShiLtJ_G0023360.1 mouse_genomes_project 17 35489972 35496379 + MGP_NODShiLtJ_P0046622 Cd320 protein_coding protein_coding MGP_NODShiLtJ_T0046623.1 MGP_NODShiLtJ_G0023360.1 mouse_genomes_project 17 35489984 35493197 + Cd320 protein_coding retained_intron MGP_NODShiLtJ_T0046624.1 MGP_NODShiLtJ_G0023360.1 mouse_genomes_project 17 35490307 35495370 + MGP_NODShiLtJ_P0046624 Cd320 protein_coding protein_coding MGP_NODShiLtJ_T0013162.1 MGP_NODShiLtJ_G0011270.1 mouse_genomes_project 17 68341823 68342865 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017422.1 MGP_NODShiLtJ_G0015216.1 mouse_genomes_project 17 35380473 35387146 + processed_transcript processed_transcript MGP_NODShiLtJ_T0045501.1 MGP_NODShiLtJ_G0023086.1 mouse_genomes_project 17 24196250 24206483 + MGP_NODShiLtJ_P0045501 Pkmyt1 protein_coding protein_coding MGP_NODShiLtJ_T0046238.1 MGP_NODShiLtJ_G0023265.1 mouse_genomes_project 17 29737151 29795886 + MGP_NODShiLtJ_P0046238 Mapk14 protein_coding protein_coding MGP_NODShiLtJ_T0046239.1 MGP_NODShiLtJ_G0023265.1 mouse_genomes_project 17 29737151 29788647 + MGP_NODShiLtJ_P0046239 Mapk14 protein_coding protein_coding MGP_NODShiLtJ_T0046240.1 MGP_NODShiLtJ_G0023265.1 mouse_genomes_project 17 29737151 29795886 + MGP_NODShiLtJ_P0046240 Mapk14 protein_coding protein_coding MGP_NODShiLtJ_T0046241.1 MGP_NODShiLtJ_G0023265.1 mouse_genomes_project 17 29737151 29795886 + MGP_NODShiLtJ_P0046241 Mapk14 protein_coding protein_coding MGP_NODShiLtJ_T0046242.1 MGP_NODShiLtJ_G0023265.1 mouse_genomes_project 17 29737249 29776143 + MGP_NODShiLtJ_P0046242 Mapk14 protein_coding protein_coding MGP_NODShiLtJ_T0046243.1 MGP_NODShiLtJ_G0023265.1 mouse_genomes_project 17 29738375 29795886 + MGP_NODShiLtJ_P0046243 Mapk14 protein_coding protein_coding MGP_NODShiLtJ_T0046244.1 MGP_NODShiLtJ_G0023265.1 mouse_genomes_project 17 29789101 29793839 + Mapk14 protein_coding retained_intron MGP_NODShiLtJ_T0048250.1 MGP_NODShiLtJ_G0023846.1 mouse_genomes_project 17 82833367 82855853 - MGP_NODShiLtJ_P0048250 Dpy30 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046838.1 MGP_NODShiLtJ_G0023404.1 mouse_genomes_project 17 36427572 36429546 - Egfl8 protein_coding retained_intron MGP_NODShiLtJ_T0046839.1 MGP_NODShiLtJ_G0023404.1 mouse_genomes_project 17 36427573 36430197 - MGP_NODShiLtJ_P0046839 Egfl8 protein_coding protein_coding MGP_NODShiLtJ_T0046840.1 MGP_NODShiLtJ_G0023404.1 mouse_genomes_project 17 36427577 36430197 - MGP_NODShiLtJ_P0046840 Egfl8 protein_coding protein_coding MGP_NODShiLtJ_T0046841.1 MGP_NODShiLtJ_G0023404.1 mouse_genomes_project 17 36428000 36430014 - MGP_NODShiLtJ_P0046841 Egfl8 protein_coding protein_coding MGP_NODShiLtJ_T0046842.1 MGP_NODShiLtJ_G0023404.1 mouse_genomes_project 17 36428387 36430182 - Egfl8 protein_coding retained_intron MGP_NODShiLtJ_T0046843.1 MGP_NODShiLtJ_G0023404.1 mouse_genomes_project 17 36428994 36429547 - Egfl8 protein_coding retained_intron MGP_NODShiLtJ_T0013137.1 MGP_NODShiLtJ_G0011245.1 mouse_genomes_project 17 40504641 40505135 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047404.1 MGP_NODShiLtJ_G0023559.1 mouse_genomes_project 17 40511973 40519170 - MGP_NODShiLtJ_P0047404 protein_coding protein_coding MGP_NODShiLtJ_T0048231.1 MGP_NODShiLtJ_G0023835.1 mouse_genomes_project 17 80038674 80119408 + MGP_NODShiLtJ_P0048231 Clip4 protein_coding protein_coding MGP_NODShiLtJ_T0048232.1 MGP_NODShiLtJ_G0023835.1 mouse_genomes_project 17 80039430 80119414 + MGP_NODShiLtJ_P0048232 Clip4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045098.1 MGP_NODShiLtJ_G0022929.1 mouse_genomes_project 17 569032 608379 - MGP_NODShiLtJ_P0045098 Tfb1m protein_coding protein_coding MGP_NODShiLtJ_T0100268.1 MGP_NODShiLtJ_G0038662.1 mouse_genomes_project 17 82459096 82459239 + Gm24475 snoRNA snoRNA MGP_NODShiLtJ_T0047844.1 MGP_NODShiLtJ_G0023700.1 mouse_genomes_project 17 53719611 53892463 + MGP_NODShiLtJ_P0047844 Lrfn2 protein_coding protein_coding MGP_NODShiLtJ_T0048127.1 MGP_NODShiLtJ_G0023809.1 mouse_genomes_project 17 74217881 74245616 - MGP_NODShiLtJ_P0048127 Rab12 protein_coding protein_coding MGP_NODShiLtJ_T0048128.1 MGP_NODShiLtJ_G0023809.1 mouse_genomes_project 17 74220860 74223690 - Rab12 protein_coding retained_intron MGP_NODShiLtJ_T0048129.1 MGP_NODShiLtJ_G0023809.1 mouse_genomes_project 17 74223719 74245279 - Rab12 protein_coding processed_transcript MGP_NODShiLtJ_T0048130.1 MGP_NODShiLtJ_G0023809.1 mouse_genomes_project 17 74231685 74245612 - Rab12 protein_coding retained_intron MGP_NODShiLtJ_T0046194.1 MGP_NODShiLtJ_G0023255.1 mouse_genomes_project 17 29297405 29305431 + MGP_NODShiLtJ_P0046194 Rpl10a protein_coding protein_coding MGP_NODShiLtJ_T0046195.1 MGP_NODShiLtJ_G0023255.1 mouse_genomes_project 17 29297517 29300855 + Rpl10a protein_coding retained_intron MGP_NODShiLtJ_T0046196.1 MGP_NODShiLtJ_G0023255.1 mouse_genomes_project 17 29297518 29305431 + MGP_NODShiLtJ_P0046196 Rpl10a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046197.1 MGP_NODShiLtJ_G0023255.1 mouse_genomes_project 17 29297544 29300612 + Rpl10a protein_coding retained_intron MGP_NODShiLtJ_T0046198.1 MGP_NODShiLtJ_G0023255.1 mouse_genomes_project 17 29297581 29300739 + Rpl10a protein_coding retained_intron MGP_NODShiLtJ_T0046199.1 MGP_NODShiLtJ_G0023255.1 mouse_genomes_project 17 29297745 29302892 + Rpl10a protein_coding retained_intron MGP_NODShiLtJ_T0046200.1 MGP_NODShiLtJ_G0023255.1 mouse_genomes_project 17 29300494 29305426 + Rpl10a protein_coding retained_intron MGP_NODShiLtJ_T0045416.1 MGP_NODShiLtJ_G0023047.1 mouse_genomes_project 17 21315696 21316646 + MGP_NODShiLtJ_P0045416 Vmn1r237 protein_coding protein_coding MGP_NODShiLtJ_T0045338.1 MGP_NODShiLtJ_G0023002.1 mouse_genomes_project 17 13988587 14010779 - MGP_NODShiLtJ_P0045338 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045339.1 MGP_NODShiLtJ_G0023002.1 mouse_genomes_project 17 13990272 14002530 - protein_coding retained_intron MGP_NODShiLtJ_T0045340.1 MGP_NODShiLtJ_G0023002.1 mouse_genomes_project 17 13990385 14002062 - protein_coding retained_intron MGP_NODShiLtJ_T0045341.1 MGP_NODShiLtJ_G0023002.1 mouse_genomes_project 17 13999882 14011819 - MGP_NODShiLtJ_P0045341 protein_coding protein_coding MGP_NODShiLtJ_T0045342.1 MGP_NODShiLtJ_G0023002.1 mouse_genomes_project 17 14005247 14011833 - protein_coding retained_intron MGP_NODShiLtJ_T0045343.1 MGP_NODShiLtJ_G0023002.1 mouse_genomes_project 17 14010293 14011801 - protein_coding processed_transcript MGP_NODShiLtJ_T0048066.1 MGP_NODShiLtJ_G0023791.1 mouse_genomes_project 17 70452796 70940871 - MGP_NODShiLtJ_P0048066 Fbxl17 protein_coding protein_coding MGP_NODShiLtJ_T0048067.1 MGP_NODShiLtJ_G0023791.1 mouse_genomes_project 17 70454399 70879011 - Fbxl17 protein_coding processed_transcript MGP_NODShiLtJ_T0048068.1 MGP_NODShiLtJ_G0023791.1 mouse_genomes_project 17 70455555 70874556 - Fbxl17 protein_coding processed_transcript MGP_NODShiLtJ_T0048069.1 MGP_NODShiLtJ_G0023791.1 mouse_genomes_project 17 70802713 70904140 - Fbxl17 protein_coding processed_transcript MGP_NODShiLtJ_T0010106.1 MGP_NODShiLtJ_G0008239.1 mouse_genomes_project 17 36734537 36734604 - Mir6970 miRNA miRNA MGP_NODShiLtJ_T0101700.1 MGP_NODShiLtJ_G0039869.1 mouse_genomes_project 17 20886666 20887600 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045161.1 MGP_NODShiLtJ_G0022952.1 mouse_genomes_project 17 5578631 5581460 + MGP_NODShiLtJ_P0045161 protein_coding protein_coding MGP_NODShiLtJ_T0013087.1 MGP_NODShiLtJ_G0011195.1 mouse_genomes_project 17 8851960 8853712 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045208.1 MGP_NODShiLtJ_G0022964.1 mouse_genomes_project 17 7462446 7465649 - MGP_NODShiLtJ_P0045208 Pabpc6 protein_coding protein_coding MGP_NODShiLtJ_T0046791.1 MGP_NODShiLtJ_G0023396.1 mouse_genomes_project 17 36204092 36250544 - MGP_NODShiLtJ_P0046791 Btnl4 protein_coding protein_coding MGP_NODShiLtJ_T0047455.1 MGP_NODShiLtJ_G0023597.1 mouse_genomes_project 17 47533737 47609033 + MGP_NODShiLtJ_P0047455 Adgrf5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047456.1 MGP_NODShiLtJ_G0023597.1 mouse_genomes_project 17 47533763 47609031 + MGP_NODShiLtJ_P0047456 Adgrf5 protein_coding protein_coding MGP_NODShiLtJ_T0048394.1 MGP_NODShiLtJ_G0023904.1 mouse_genomes_project 17 94835190 94920718 - MGP_NODShiLtJ_P0048394 Lrpprc protein_coding protein_coding MGP_NODShiLtJ_T0048395.1 MGP_NODShiLtJ_G0023904.1 mouse_genomes_project 17 94842716 94861770 - Lrpprc protein_coding processed_transcript MGP_NODShiLtJ_T0048396.1 MGP_NODShiLtJ_G0023904.1 mouse_genomes_project 17 94861765 94881813 - MGP_NODShiLtJ_P0048396 Lrpprc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048397.1 MGP_NODShiLtJ_G0023904.1 mouse_genomes_project 17 94879331 94881813 - Lrpprc protein_coding retained_intron MGP_NODShiLtJ_T0048398.1 MGP_NODShiLtJ_G0023904.1 mouse_genomes_project 17 94896924 94920949 - Lrpprc protein_coding retained_intron MGP_NODShiLtJ_T0048399.1 MGP_NODShiLtJ_G0023904.1 mouse_genomes_project 17 94898085 94920722 - Lrpprc protein_coding retained_intron MGP_NODShiLtJ_T0048400.1 MGP_NODShiLtJ_G0023904.1 mouse_genomes_project 17 94900880 94907831 - Lrpprc protein_coding processed_transcript MGP_NODShiLtJ_T0013121.1 MGP_NODShiLtJ_G0011229.1 mouse_genomes_project 17 38322010 38322226 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047695.1 MGP_NODShiLtJ_G0023662.1 mouse_genomes_project 17 51414583 51430830 + MGP_NODShiLtJ_P0047695 Prph2 protein_coding protein_coding MGP_NODShiLtJ_T0047696.1 MGP_NODShiLtJ_G0023662.1 mouse_genomes_project 17 51414602 51426617 + Prph2 protein_coding retained_intron MGP_NODShiLtJ_T0011318.1 MGP_NODShiLtJ_G0009451.1 mouse_genomes_project 17 50844583 50844907 + Gm23037 misc_RNA misc_RNA MGP_NODShiLtJ_T0047187.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37924180 37928842 - MGP_NODShiLtJ_P0047187 2310061I04Rik protein_coding protein_coding MGP_NODShiLtJ_T0047188.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37924180 37928532 - MGP_NODShiLtJ_P0047188 2310061I04Rik protein_coding protein_coding MGP_NODShiLtJ_T0047189.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37924186 37926730 - MGP_NODShiLtJ_P0047189 2310061I04Rik protein_coding protein_coding MGP_NODShiLtJ_T0047190.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37924190 37928523 - MGP_NODShiLtJ_P0047190 2310061I04Rik protein_coding protein_coding MGP_NODShiLtJ_T0047191.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37924334 37927337 - MGP_NODShiLtJ_P0047191 2310061I04Rik protein_coding protein_coding MGP_NODShiLtJ_T0047192.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37926460 37928485 - MGP_NODShiLtJ_P0047192 2310061I04Rik protein_coding protein_coding MGP_NODShiLtJ_T0047193.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37927187 37928020 - 2310061I04Rik protein_coding processed_transcript MGP_NODShiLtJ_T0047194.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37927336 37928515 - MGP_NODShiLtJ_P0047194 2310061I04Rik protein_coding protein_coding MGP_NODShiLtJ_T0047195.1 MGP_NODShiLtJ_G0023479.1 mouse_genomes_project 17 37927687 37928724 - 2310061I04Rik protein_coding processed_transcript MGP_NODShiLtJ_T0010099.1 MGP_NODShiLtJ_G0008232.1 mouse_genomes_project 17 30749616 30749679 + Mir7667 miRNA miRNA MGP_NODShiLtJ_T0045148.1 MGP_NODShiLtJ_G0022944.1 mouse_genomes_project 17 4165948 4213257 - MGP_NODShiLtJ_P0045148 Ezr protein_coding protein_coding MGP_NODShiLtJ_T0045149.1 MGP_NODShiLtJ_G0022944.1 mouse_genomes_project 17 4168744 4170729 - Ezr protein_coding processed_transcript MGP_NODShiLtJ_T0010076.1 MGP_NODShiLtJ_G0008209.1 mouse_genomes_project 17 16776353 16776470 - Gm25927 miRNA miRNA MGP_NODShiLtJ_T0017401.1 MGP_NODShiLtJ_G0015205.1 mouse_genomes_project 17 8738530 8759293 + Gm16169 processed_transcript antisense MGP_NODShiLtJ_T0017402.1 MGP_NODShiLtJ_G0015205.1 mouse_genomes_project 17 8738535 8747362 + Gm16169 processed_transcript retained_intron MGP_NODShiLtJ_T0045101.1 MGP_NODShiLtJ_G0022932.1 mouse_genomes_project 17 2215234 2328645 + Arid1b protein_coding processed_transcript MGP_NODShiLtJ_T0045102.1 MGP_NODShiLtJ_G0022932.1 mouse_genomes_project 17 2218687 2581094 + MGP_NODShiLtJ_P0045102 Arid1b protein_coding protein_coding MGP_NODShiLtJ_T0045103.1 MGP_NODShiLtJ_G0022932.1 mouse_genomes_project 17 2218822 2585185 + MGP_NODShiLtJ_P0045103 Arid1b protein_coding protein_coding MGP_NODShiLtJ_T0045104.1 MGP_NODShiLtJ_G0022932.1 mouse_genomes_project 17 2220172 2585185 + MGP_NODShiLtJ_P0045104 Arid1b protein_coding protein_coding MGP_NODShiLtJ_T0045105.1 MGP_NODShiLtJ_G0022932.1 mouse_genomes_project 17 2220180 2329098 + Arid1b protein_coding retained_intron MGP_NODShiLtJ_T0045106.1 MGP_NODShiLtJ_G0022932.1 mouse_genomes_project 17 2266767 2359527 + Arid1b protein_coding retained_intron MGP_NODShiLtJ_T0045680.1 MGP_NODShiLtJ_G0023136.1 mouse_genomes_project 17 25326855 25329073 - MGP_NODShiLtJ_P0045680 Rnf151 protein_coding protein_coding MGP_NODShiLtJ_T0046271.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30045923 30087646 - MGP_NODShiLtJ_P0046271 Stk38 protein_coding protein_coding MGP_NODShiLtJ_T0046272.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30046055 30048132 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046273.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30047291 30087646 - MGP_NODShiLtJ_P0046273 Stk38 protein_coding protein_coding MGP_NODShiLtJ_T0046274.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30047993 30056898 - Stk38 protein_coding retained_intron MGP_NODShiLtJ_T0046275.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30048146 30049774 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046276.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30049336 30057187 - Stk38 protein_coding retained_intron MGP_NODShiLtJ_T0046277.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30049397 30054509 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046278.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30049397 30055045 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046279.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30049625 30054794 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046280.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30052448 30054779 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046281.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30054799 30087654 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046282.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30058261 30078250 - Stk38 protein_coding retained_intron MGP_NODShiLtJ_T0046283.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30062643 30066117 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046284.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30066103 30087446 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046285.1 MGP_NODShiLtJ_G0023272.1 mouse_genomes_project 17 30073938 30087607 - Stk38 protein_coding processed_transcript MGP_NODShiLtJ_T0046442.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33435570 33462248 + MGP_NODShiLtJ_P0046442 Rrp1b protein_coding protein_coding MGP_NODShiLtJ_T0046443.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33435873 33447381 + Rrp1b protein_coding retained_intron MGP_NODShiLtJ_T0046444.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33435899 33447374 + MGP_NODShiLtJ_P0046444 Rrp1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046445.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33447743 33462239 + Rrp1b protein_coding retained_intron MGP_NODShiLtJ_T0046446.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33448265 33451192 + Rrp1b protein_coding retained_intron MGP_NODShiLtJ_T0046447.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33449477 33451071 + Rrp1b protein_coding retained_intron MGP_NODShiLtJ_T0046448.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33451195 33455981 + MGP_NODShiLtJ_P0046448 Rrp1b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046449.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33451663 33455994 + Rrp1b protein_coding retained_intron MGP_NODShiLtJ_T0046450.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33455297 33456410 + Rrp1b protein_coding processed_transcript MGP_NODShiLtJ_T0046451.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33457667 33459952 + Rrp1b protein_coding retained_intron MGP_NODShiLtJ_T0046452.1 MGP_NODShiLtJ_G0023314.1 mouse_genomes_project 17 33458546 33460045 + Rrp1b protein_coding retained_intron MGP_NODShiLtJ_T0047869.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56826985 56925350 - MGP_NODShiLtJ_P0047869 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047870.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56826986 56919286 - MGP_NODShiLtJ_P0047870 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047871.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56829692 56926703 - MGP_NODShiLtJ_P0047871 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047872.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56830251 56903754 - MGP_NODShiLtJ_P0047872 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047873.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56830254 56919264 - MGP_NODShiLtJ_P0047873 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047874.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56830270 56907838 - MGP_NODShiLtJ_P0047874 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047875.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56830275 56905515 - MGP_NODShiLtJ_P0047875 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047876.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56830787 56833066 - Satb1 protein_coding retained_intron MGP_NODShiLtJ_T0047877.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56895164 56901967 - Satb1 protein_coding processed_transcript MGP_NODShiLtJ_T0047878.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56897200 56913810 - MGP_NODShiLtJ_P0047878 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047879.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56898197 56924697 - MGP_NODShiLtJ_P0047879 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047880.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56899914 56903754 - Satb1 protein_coding retained_intron MGP_NODShiLtJ_T0047881.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56902023 56919286 - MGP_NODShiLtJ_P0047881 Satb1 protein_coding protein_coding MGP_NODShiLtJ_T0047882.1 MGP_NODShiLtJ_G0023708.1 mouse_genomes_project 17 56917346 56922195 - Satb1 protein_coding retained_intron MGP_NODShiLtJ_T0048257.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83117366 83308564 + MGP_NODShiLtJ_P0048257 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048258.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83117539 83307589 + MGP_NODShiLtJ_P0048258 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048259.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83117539 83307589 + MGP_NODShiLtJ_P0048259 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048260.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83117539 83307589 + MGP_NODShiLtJ_P0048260 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048261.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83117593 83157698 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048262.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83117623 83307589 + MGP_NODShiLtJ_P0048262 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048263.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83136230 83139151 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048264.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83146305 83151686 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048265.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83146319 83153403 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048266.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83151313 83153550 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048267.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83151642 83156642 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048268.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83194237 83220994 + MGP_NODShiLtJ_P0048268 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048269.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83200374 83203576 + MGP_NODShiLtJ_P0048269 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048270.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83211227 83220993 + MGP_NODShiLtJ_P0048270 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048271.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83211596 83242085 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048272.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83211626 83219796 + MGP_NODShiLtJ_P0048272 Birc6 protein_coding protein_coding MGP_NODShiLtJ_T0048273.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83212389 83215699 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048274.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83219427 83220993 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048275.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83254033 83260570 + MGP_NODShiLtJ_P0048275 Birc6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048276.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83254043 83255868 + Birc6 protein_coding processed_transcript MGP_NODShiLtJ_T0048277.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83255791 83308555 + MGP_NODShiLtJ_P0048277 Birc6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048278.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83260451 83271289 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048279.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83272683 83284594 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0048280.1 MGP_NODShiLtJ_G0023851.1 mouse_genomes_project 17 83302267 83308277 + Birc6 protein_coding retained_intron MGP_NODShiLtJ_T0100266.1 MGP_NODShiLtJ_G0038660.1 mouse_genomes_project 17 79867807 79867883 + Gm22858 snoRNA snoRNA MGP_NODShiLtJ_T0045983.1 MGP_NODShiLtJ_G0023208.1 mouse_genomes_project 17 26817424 26830393 + MGP_NODShiLtJ_P0045983 Tmem8 protein_coding protein_coding MGP_NODShiLtJ_T0045984.1 MGP_NODShiLtJ_G0023208.1 mouse_genomes_project 17 26826580 26830393 + MGP_NODShiLtJ_P0045984 Tmem8 protein_coding protein_coding MGP_NODShiLtJ_T0013146.1 MGP_NODShiLtJ_G0011254.1 mouse_genomes_project 17 52612362 52612556 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048085.1 MGP_NODShiLtJ_G0023800.1 mouse_genomes_project 17 73266615 73405223 - MGP_NODShiLtJ_P0048085 Rab31 protein_coding protein_coding MGP_NODShiLtJ_T0045372.1 MGP_NODShiLtJ_G0023012.1 mouse_genomes_project 17 16854800 16944776 + MGP_NODShiLtJ_P0045372 Fpr3 protein_coding protein_coding MGP_NODShiLtJ_T0045375.1 MGP_NODShiLtJ_G0023012.1 mouse_genomes_project 17 16943556 16944776 + MGP_NODShiLtJ_P0045375 Fpr3 protein_coding protein_coding MGP_NODShiLtJ_T0048356.1 MGP_NODShiLtJ_G0023887.1 mouse_genomes_project 17 90586497 90588341 - MGP_NODShiLtJ_P0048356 protein_coding protein_coding MGP_NODShiLtJ_T0100254.1 MGP_NODShiLtJ_G0038648.1 mouse_genomes_project 17 37087131 37087265 - Gm23442 snoRNA snoRNA MGP_NODShiLtJ_T0006927.1 MGP_NODShiLtJ_G0005691.1 mouse_genomes_project 17 96016616 96048856 - Gm29418 lincRNA lincRNA MGP_NODShiLtJ_T0045397.1 MGP_NODShiLtJ_G0023034.1 mouse_genomes_project 17 20535780 20536812 - MGP_NODShiLtJ_P0045397 Fpr-rs3 protein_coding protein_coding MGP_NODShiLtJ_T0011322.1 MGP_NODShiLtJ_G0009455.1 mouse_genomes_project 17 75372069 75372346 + Gm22277 misc_RNA misc_RNA MGP_NODShiLtJ_T0046300.1 MGP_NODShiLtJ_G0023277.1 mouse_genomes_project 17 30365131 30379285 - MGP_NODShiLtJ_P0046300 Ppil1 protein_coding protein_coding MGP_NODShiLtJ_T0046301.1 MGP_NODShiLtJ_G0023277.1 mouse_genomes_project 17 30365553 30372034 - Ppil1 protein_coding retained_intron MGP_NODShiLtJ_T0046302.1 MGP_NODShiLtJ_G0023277.1 mouse_genomes_project 17 30365592 30379039 - MGP_NODShiLtJ_P0046302 Ppil1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046303.1 MGP_NODShiLtJ_G0023277.1 mouse_genomes_project 17 30376243 30379065 - Ppil1 protein_coding processed_transcript MGP_NODShiLtJ_T0048004.1 MGP_NODShiLtJ_G0023759.1 mouse_genomes_project 17 62608029 62613555 + MGP_NODShiLtJ_P0048004 Dus3l protein_coding protein_coding MGP_NODShiLtJ_T0047762.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52324082 52382282 + MGP_NODShiLtJ_P0047762 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047763.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52324653 52375846 + MGP_NODShiLtJ_P0047763 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047764.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52324980 52382278 + MGP_NODShiLtJ_P0047764 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047765.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52325956 52378831 + MGP_NODShiLtJ_P0047765 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047766.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52342672 52375846 + MGP_NODShiLtJ_P0047766 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047767.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52347476 52375961 + MGP_NODShiLtJ_P0047767 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047768.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52351469 52376062 + MGP_NODShiLtJ_P0047768 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047769.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52358736 52376064 + MGP_NODShiLtJ_P0047769 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047770.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52358736 52376066 + MGP_NODShiLtJ_P0047770 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047771.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52372638 52376142 + MGP_NODShiLtJ_P0047771 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047772.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52375481 52382278 + MGP_NODShiLtJ_P0047772 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047773.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52375919 52382279 + MGP_NODShiLtJ_P0047773 Tfeb protein_coding protein_coding MGP_NODShiLtJ_T0047774.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52377323 52379594 + Tfeb protein_coding processed_transcript MGP_NODShiLtJ_T0047775.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52377665 52378699 + Tfeb protein_coding retained_intron MGP_NODShiLtJ_T0047776.1 MGP_NODShiLtJ_G0023681.1 mouse_genomes_project 17 52379318 52381476 + Tfeb protein_coding retained_intron MGP_NODShiLtJ_T0048427.1 MGP_NODShiLtJ_G0023919.1 mouse_genomes_project 17 97338720 97349990 + MGP_NODShiLtJ_P0048427 Cript protein_coding protein_coding MGP_NODShiLtJ_T0048428.1 MGP_NODShiLtJ_G0023919.1 mouse_genomes_project 17 97338780 97341414 + Cript protein_coding retained_intron MGP_NODShiLtJ_T0048429.1 MGP_NODShiLtJ_G0023919.1 mouse_genomes_project 17 97338781 97349652 + MGP_NODShiLtJ_P0048429 Cript protein_coding protein_coding MGP_NODShiLtJ_T0048253.1 MGP_NODShiLtJ_G0023848.1 mouse_genomes_project 17 82940095 82972504 + MGP_NODShiLtJ_P0048253 Slc30a6 protein_coding protein_coding MGP_NODShiLtJ_T0048254.1 MGP_NODShiLtJ_G0023848.1 mouse_genomes_project 17 82940095 82972504 + MGP_NODShiLtJ_P0048254 Slc30a6 protein_coding protein_coding MGP_NODShiLtJ_T0045830.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26018898 26080602 - MGP_NODShiLtJ_P0045830 Cacna1h protein_coding protein_coding MGP_NODShiLtJ_T0045831.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26018899 26080470 - MGP_NODShiLtJ_P0045831 Cacna1h protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045832.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26018901 26080602 - MGP_NODShiLtJ_P0045832 Cacna1h protein_coding protein_coding MGP_NODShiLtJ_T0045833.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26018908 26080602 - MGP_NODShiLtJ_P0045833 Cacna1h protein_coding protein_coding MGP_NODShiLtJ_T0045834.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26021498 26024969 - MGP_NODShiLtJ_P0045834 Cacna1h protein_coding protein_coding MGP_NODShiLtJ_T0045835.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26032562 26033797 - Cacna1h protein_coding retained_intron MGP_NODShiLtJ_T0045836.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26036587 26080587 - Cacna1h protein_coding retained_intron MGP_NODShiLtJ_T0045837.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26041987 26080097 - MGP_NODShiLtJ_P0045837 Cacna1h protein_coding protein_coding MGP_NODShiLtJ_T0045838.1 MGP_NODShiLtJ_G0023173.1 mouse_genomes_project 17 26078652 26080602 - Cacna1h protein_coding retained_intron MGP_NODShiLtJ_T0045245.1 MGP_NODShiLtJ_G0022976.1 mouse_genomes_project 17 10951469 10953278 + MGP_NODShiLtJ_P0045245 Mrgprh protein_coding protein_coding MGP_NODShiLtJ_T0006837.1 MGP_NODShiLtJ_G0005623.1 mouse_genomes_project 17 11396273 11410132 + lincRNA lincRNA MGP_NODShiLtJ_T0013101.1 MGP_NODShiLtJ_G0011209.1 mouse_genomes_project 17 23955366 23955689 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047212.1 MGP_NODShiLtJ_G0023481.1 mouse_genomes_project 17 37941893 37949280 - MGP_NODShiLtJ_P0047212 Mrps18b protein_coding protein_coding MGP_NODShiLtJ_T0047213.1 MGP_NODShiLtJ_G0023481.1 mouse_genomes_project 17 37941893 37949280 - MGP_NODShiLtJ_P0047213 Mrps18b protein_coding protein_coding MGP_NODShiLtJ_T0047214.1 MGP_NODShiLtJ_G0023481.1 mouse_genomes_project 17 37941900 37949221 - MGP_NODShiLtJ_P0047214 Mrps18b protein_coding protein_coding MGP_NODShiLtJ_T0047215.1 MGP_NODShiLtJ_G0023481.1 mouse_genomes_project 17 37942017 37944083 - Mrps18b protein_coding retained_intron MGP_NODShiLtJ_T0047216.1 MGP_NODShiLtJ_G0023481.1 mouse_genomes_project 17 37942365 37949228 - MGP_NODShiLtJ_P0047216 Mrps18b protein_coding protein_coding MGP_NODShiLtJ_T0047217.1 MGP_NODShiLtJ_G0023481.1 mouse_genomes_project 17 37942955 37949214 - MGP_NODShiLtJ_P0047217 Mrps18b protein_coding protein_coding MGP_NODShiLtJ_T0047218.1 MGP_NODShiLtJ_G0023481.1 mouse_genomes_project 17 37945305 37949268 - Mrps18b protein_coding retained_intron MGP_NODShiLtJ_T0047219.1 MGP_NODShiLtJ_G0023481.1 mouse_genomes_project 17 37946077 37949094 - Mrps18b protein_coding processed_transcript MGP_NODShiLtJ_T0047269.1 MGP_NODShiLtJ_G0023495.1 mouse_genomes_project 17 38437870 38439062 - MGP_NODShiLtJ_P0047269 protein_coding protein_coding MGP_NODShiLtJ_T0046439.1 MGP_NODShiLtJ_G0023313.1 mouse_genomes_project 17 33344613 33433977 - MGP_NODShiLtJ_P0046439 Hsf2bp protein_coding protein_coding MGP_NODShiLtJ_T0046440.1 MGP_NODShiLtJ_G0023313.1 mouse_genomes_project 17 33346201 33411577 - MGP_NODShiLtJ_P0046440 Hsf2bp protein_coding protein_coding MGP_NODShiLtJ_T0046441.1 MGP_NODShiLtJ_G0023313.1 mouse_genomes_project 17 33409455 33422674 - Hsf2bp protein_coding processed_transcript MGP_NODShiLtJ_T0101748.1 MGP_NODShiLtJ_G0039916.1 mouse_genomes_project 17 38790702 38794635 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046543.1 MGP_NODShiLtJ_G0023345.1 mouse_genomes_project 17 34904905 34919412 + MGP_NODShiLtJ_P0046543 Zfp955a protein_coding protein_coding MGP_NODShiLtJ_T0045355.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16776729 16778444 + Spaca6 protein_coding processed_transcript MGP_NODShiLtJ_T0045356.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16776903 16778077 + Spaca6 protein_coding retained_intron MGP_NODShiLtJ_T0045357.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16777014 16786129 + MGP_NODShiLtJ_P0045357 Spaca6 protein_coding protein_coding MGP_NODShiLtJ_T0045358.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16777074 16790065 + MGP_NODShiLtJ_P0045358 Spaca6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045359.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16777190 16785562 + Spaca6 protein_coding processed_transcript MGP_NODShiLtJ_T0045360.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16777190 16785562 + Spaca6 protein_coding retained_intron MGP_NODShiLtJ_T0045361.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16777454 16784776 + MGP_NODShiLtJ_P0045361 Spaca6 protein_coding protein_coding MGP_NODShiLtJ_T0045362.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16778045 16783206 + Spaca6 protein_coding retained_intron MGP_NODShiLtJ_T0045363.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16778962 16784078 + Spaca6 protein_coding retained_intron MGP_NODShiLtJ_T0045364.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16783001 16785575 + Spaca6 protein_coding retained_intron MGP_NODShiLtJ_T0045365.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16784556 16786129 + Spaca6 protein_coding retained_intron MGP_NODShiLtJ_T0045366.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16784746 16786125 + MGP_NODShiLtJ_P0045366 Spaca6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045367.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16785333 16786129 + Spaca6 protein_coding retained_intron MGP_NODShiLtJ_T0045368.1 MGP_NODShiLtJ_G0023008.1 mouse_genomes_project 17 16785629 16786129 + Spaca6 protein_coding retained_intron MGP_NODShiLtJ_T0006885.1 MGP_NODShiLtJ_G0005663.1 mouse_genomes_project 17 37777040 37785274 + 4833427F10Rik lincRNA lincRNA MGP_NODShiLtJ_T0046336.1 MGP_NODShiLtJ_G0023287.1 mouse_genomes_project 17 30769822 30866433 + MGP_NODShiLtJ_P0046336 Gm28043 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046319.1 MGP_NODShiLtJ_G0023281.1 mouse_genomes_project 17 30493001 30515075 + MGP_NODShiLtJ_P0046319 Fgd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046320.1 MGP_NODShiLtJ_G0023281.1 mouse_genomes_project 17 30493019 30497147 + Fgd2 protein_coding processed_transcript MGP_NODShiLtJ_T0046321.1 MGP_NODShiLtJ_G0023281.1 mouse_genomes_project 17 30493029 30499093 + Fgd2 protein_coding retained_intron MGP_NODShiLtJ_T0046322.1 MGP_NODShiLtJ_G0023281.1 mouse_genomes_project 17 30493029 30514968 + MGP_NODShiLtJ_P0046322 Fgd2 protein_coding protein_coding MGP_NODShiLtJ_T0046323.1 MGP_NODShiLtJ_G0023281.1 mouse_genomes_project 17 30497524 30500048 + Fgd2 protein_coding retained_intron MGP_NODShiLtJ_T0046324.1 MGP_NODShiLtJ_G0023281.1 mouse_genomes_project 17 30501053 30510398 + Fgd2 protein_coding retained_intron MGP_NODShiLtJ_T0046325.1 MGP_NODShiLtJ_G0023281.1 mouse_genomes_project 17 30501065 30509778 + Fgd2 protein_coding retained_intron MGP_NODShiLtJ_T0046326.1 MGP_NODShiLtJ_G0023281.1 mouse_genomes_project 17 30511918 30513867 + Fgd2 protein_coding processed_transcript MGP_NODShiLtJ_T0006910.1 MGP_NODShiLtJ_G0005679.1 mouse_genomes_project 17 72043668 72086802 - AU016765 lincRNA lincRNA MGP_NODShiLtJ_T0006911.1 MGP_NODShiLtJ_G0005679.1 mouse_genomes_project 17 72043721 72086760 - AU016765 lincRNA lincRNA MGP_NODShiLtJ_T0006912.1 MGP_NODShiLtJ_G0005679.1 mouse_genomes_project 17 72043724 72086840 - AU016765 lincRNA lincRNA MGP_NODShiLtJ_T0006913.1 MGP_NODShiLtJ_G0005679.1 mouse_genomes_project 17 72043726 72086683 - AU016765 lincRNA lincRNA MGP_NODShiLtJ_T0046782.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36132389 36151403 + BC051142 protein_coding processed_transcript MGP_NODShiLtJ_T0046783.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36132389 36179872 + MGP_NODShiLtJ_P0046783 BC051142 protein_coding protein_coding MGP_NODShiLtJ_T0046784.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36132389 36195163 + MGP_NODShiLtJ_P0046784 BC051142 protein_coding protein_coding MGP_NODShiLtJ_T0046785.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36132390 36154514 + BC051142 protein_coding retained_intron MGP_NODShiLtJ_T0046786.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36132409 36195163 + MGP_NODShiLtJ_P0046786 BC051142 protein_coding protein_coding MGP_NODShiLtJ_T0046787.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36150718 36195164 + MGP_NODShiLtJ_P0046787 BC051142 protein_coding protein_coding MGP_NODShiLtJ_T0046788.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36150787 36174209 + MGP_NODShiLtJ_P0046788 BC051142 protein_coding protein_coding MGP_NODShiLtJ_T0046789.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36151398 36169495 + BC051142 protein_coding processed_transcript MGP_NODShiLtJ_T0046790.1 MGP_NODShiLtJ_G0023395.1 mouse_genomes_project 17 36151420 36155278 + MGP_NODShiLtJ_P0046790 BC051142 protein_coding protein_coding MGP_NODShiLtJ_T0045295.1 MGP_NODShiLtJ_G0022991.1 mouse_genomes_project 17 13243055 13351153 - MGP_NODShiLtJ_P0045295 Wdr27 protein_coding protein_coding MGP_NODShiLtJ_T0045296.1 MGP_NODShiLtJ_G0022991.1 mouse_genomes_project 17 13280010 13351153 - MGP_NODShiLtJ_P0045296 Wdr27 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045349.1 MGP_NODShiLtJ_G0023004.1 mouse_genomes_project 17 14291787 14314461 - MGP_NODShiLtJ_P0045349 Rgmb protein_coding protein_coding MGP_NODShiLtJ_T0047737.1 MGP_NODShiLtJ_G0023674.1 mouse_genomes_project 17 52178964 52221233 + Gm20517 protein_coding retained_intron MGP_NODShiLtJ_T0047738.1 MGP_NODShiLtJ_G0023674.1 mouse_genomes_project 17 52178973 52222557 + Gm20517 protein_coding retained_intron MGP_NODShiLtJ_T0047740.1 MGP_NODShiLtJ_G0023674.1 mouse_genomes_project 17 52178988 52258235 + MGP_NODShiLtJ_P0047740 Gm20517 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048230.1 MGP_NODShiLtJ_G0023834.1 mouse_genomes_project 17 79984689 80006555 - MGP_NODShiLtJ_P0048230 BC027072 protein_coding protein_coding MGP_NODShiLtJ_T0046781.1 MGP_NODShiLtJ_G0023394.1 mouse_genomes_project 17 36112105 36120795 + MGP_NODShiLtJ_P0046781 Btnl1 protein_coding protein_coding MGP_NODShiLtJ_T0047517.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49914886 49929858 - MGP_NODShiLtJ_P0047517 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047518.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49914886 49922279 - MGP_NODShiLtJ_P0047518 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047519.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49914888 49923344 - MGP_NODShiLtJ_P0047519 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047520.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49914889 49925609 - MGP_NODShiLtJ_P0047520 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047521.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49914889 49925278 - MGP_NODShiLtJ_P0047521 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047522.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49914889 49925276 - MGP_NODShiLtJ_P0047522 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047523.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49915228 49922201 - MGP_NODShiLtJ_P0047523 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047524.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49915357 49921949 - MGP_NODShiLtJ_P0047524 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047525.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49915904 49918428 - Slc29a1 protein_coding processed_transcript MGP_NODShiLtJ_T0047526.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49918052 49925208 - MGP_NODShiLtJ_P0047526 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047527.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49918053 49925308 - MGP_NODShiLtJ_P0047527 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047528.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49918206 49922544 - Slc29a1 protein_coding retained_intron MGP_NODShiLtJ_T0047529.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49918554 49919798 - Slc29a1 protein_coding retained_intron MGP_NODShiLtJ_T0047530.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49918893 49925257 - Slc29a1 protein_coding retained_intron MGP_NODShiLtJ_T0047531.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919103 49925221 - Slc29a1 protein_coding retained_intron MGP_NODShiLtJ_T0047532.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919103 49929859 - MGP_NODShiLtJ_P0047532 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047533.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919203 49925558 - MGP_NODShiLtJ_P0047533 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047534.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919209 49923338 - MGP_NODShiLtJ_P0047534 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047535.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919383 49929861 - MGP_NODShiLtJ_P0047535 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047536.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919408 49925262 - MGP_NODShiLtJ_P0047536 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047537.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919458 49925208 - MGP_NODShiLtJ_P0047537 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047538.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919643 49925247 - MGP_NODShiLtJ_P0047538 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047539.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919709 49925249 - MGP_NODShiLtJ_P0047539 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047540.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919755 49925663 - MGP_NODShiLtJ_P0047540 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0047541.1 MGP_NODShiLtJ_G0023618.1 mouse_genomes_project 17 49919798 49926771 - MGP_NODShiLtJ_P0047541 Slc29a1 protein_coding protein_coding MGP_NODShiLtJ_T0048083.1 MGP_NODShiLtJ_G0023798.1 mouse_genomes_project 17 73192871 73226395 - MGP_NODShiLtJ_P0048083 Vapa protein_coding protein_coding MGP_NODShiLtJ_T0003671.1 MGP_NODShiLtJ_G0003305.1 mouse_genomes_project 17 27295362 27306194 - 1700049J03Rik antisense antisense MGP_NODShiLtJ_T0047955.1 MGP_NODShiLtJ_G0023746.1 mouse_genomes_project 17 62124881 62156212 + MGP_NODShiLtJ_P0047955 Kdm4b protein_coding protein_coding MGP_NODShiLtJ_T0047956.1 MGP_NODShiLtJ_G0023746.1 mouse_genomes_project 17 62124893 62203858 + MGP_NODShiLtJ_P0047956 Kdm4b protein_coding protein_coding MGP_NODShiLtJ_T0047957.1 MGP_NODShiLtJ_G0023746.1 mouse_genomes_project 17 62124910 62203853 + MGP_NODShiLtJ_P0047957 Kdm4b protein_coding protein_coding MGP_NODShiLtJ_T0047958.1 MGP_NODShiLtJ_G0023746.1 mouse_genomes_project 17 62173309 62186950 + Kdm4b protein_coding processed_transcript MGP_NODShiLtJ_T0047959.1 MGP_NODShiLtJ_G0023746.1 mouse_genomes_project 17 62194508 62194777 + Kdm4b protein_coding processed_transcript MGP_NODShiLtJ_T0047960.1 MGP_NODShiLtJ_G0023746.1 mouse_genomes_project 17 62194911 62203864 + MGP_NODShiLtJ_P0047960 Kdm4b protein_coding protein_coding MGP_NODShiLtJ_T0048470.1 MGP_NODShiLtJ_G0023931.1 mouse_genomes_project 17 98942707 98994368 + MGP_NODShiLtJ_P0048470 Foxn2 protein_coding protein_coding MGP_NODShiLtJ_T0048471.1 MGP_NODShiLtJ_G0023931.1 mouse_genomes_project 17 98942739 98965744 + MGP_NODShiLtJ_P0048471 Foxn2 protein_coding protein_coding MGP_NODShiLtJ_T0048472.1 MGP_NODShiLtJ_G0023931.1 mouse_genomes_project 17 98942762 98981166 + Foxn2 protein_coding retained_intron MGP_NODShiLtJ_T0048473.1 MGP_NODShiLtJ_G0023931.1 mouse_genomes_project 17 98942779 98990567 + MGP_NODShiLtJ_P0048473 Foxn2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047373.1 MGP_NODShiLtJ_G0023532.1 mouse_genomes_project 17 39607167 39610614 - MGP_NODShiLtJ_P0047373 Olfr99 protein_coding protein_coding MGP_NODShiLtJ_T0010126.1 MGP_NODShiLtJ_G0008259.1 mouse_genomes_project 17 73118372 73118497 + Gm25731 miRNA miRNA MGP_NODShiLtJ_T0003651.1 MGP_NODShiLtJ_G0003295.1 mouse_genomes_project 17 8354548 8374542 + A230009B12Rik antisense antisense MGP_NODShiLtJ_T0003652.1 MGP_NODShiLtJ_G0003295.1 mouse_genomes_project 17 8354554 8374178 + A230009B12Rik antisense antisense MGP_NODShiLtJ_T0003653.1 MGP_NODShiLtJ_G0003295.1 mouse_genomes_project 17 8354628 8393667 + A230009B12Rik antisense antisense MGP_NODShiLtJ_T0003654.1 MGP_NODShiLtJ_G0003295.1 mouse_genomes_project 17 8363875 8374177 + A230009B12Rik antisense antisense MGP_NODShiLtJ_T0046481.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33843068 33861559 - MGP_NODShiLtJ_P0046481 Rasal3 protein_coding protein_coding MGP_NODShiLtJ_T0046482.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33843070 33861535 - MGP_NODShiLtJ_P0046482 Rasal3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046483.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33843079 33861544 - Rasal3 protein_coding retained_intron MGP_NODShiLtJ_T0046484.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33843326 33843918 - Rasal3 protein_coding retained_intron MGP_NODShiLtJ_T0046485.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33843333 33861557 - MGP_NODShiLtJ_P0046485 Rasal3 protein_coding protein_coding MGP_NODShiLtJ_T0046486.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33843382 33861513 - MGP_NODShiLtJ_P0046486 Rasal3 protein_coding protein_coding MGP_NODShiLtJ_T0046487.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33845048 33846136 - Rasal3 protein_coding retained_intron MGP_NODShiLtJ_T0046488.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33846332 33847781 - Rasal3 protein_coding retained_intron MGP_NODShiLtJ_T0046489.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33847976 33849119 - Rasal3 protein_coding retained_intron MGP_NODShiLtJ_T0046490.1 MGP_NODShiLtJ_G0023321.1 mouse_genomes_project 17 33851184 33861557 - Rasal3 protein_coding retained_intron MGP_NODShiLtJ_T0010103.1 MGP_NODShiLtJ_G0008236.1 mouse_genomes_project 17 35740560 35740620 + Mir219c miRNA miRNA MGP_NODShiLtJ_T0048135.1 MGP_NODShiLtJ_G0023813.1 mouse_genomes_project 17 75525039 75655275 + MGP_NODShiLtJ_P0048135 Lama1 protein_coding protein_coding MGP_NODShiLtJ_T0046146.1 MGP_NODShiLtJ_G0023247.1 mouse_genomes_project 17 28828351 28836450 - MGP_NODShiLtJ_P0046146 Taf11 protein_coding protein_coding MGP_NODShiLtJ_T0046147.1 MGP_NODShiLtJ_G0023247.1 mouse_genomes_project 17 28828357 28834929 - MGP_NODShiLtJ_P0046147 Taf11 protein_coding protein_coding MGP_NODShiLtJ_T0046148.1 MGP_NODShiLtJ_G0023247.1 mouse_genomes_project 17 28828891 28830501 - Taf11 protein_coding processed_transcript MGP_NODShiLtJ_T0046045.1 MGP_NODShiLtJ_G0023222.1 mouse_genomes_project 17 27425981 27451749 + MGP_NODShiLtJ_P0046045 Atp6v0e protein_coding protein_coding MGP_NODShiLtJ_T0046046.1 MGP_NODShiLtJ_G0023222.1 mouse_genomes_project 17 27425997 27450056 + MGP_NODShiLtJ_P0046046 Atp6v0e protein_coding protein_coding MGP_NODShiLtJ_T0048000.1 MGP_NODShiLtJ_G0023756.1 mouse_genomes_project 17 62547063 62553180 - MGP_NODShiLtJ_P0048000 Vmac protein_coding protein_coding MGP_NODShiLtJ_T0048001.1 MGP_NODShiLtJ_G0023756.1 mouse_genomes_project 17 62547063 62552402 - MGP_NODShiLtJ_P0048001 Vmac protein_coding protein_coding MGP_NODShiLtJ_T0047473.1 MGP_NODShiLtJ_G0023603.1 mouse_genomes_project 17 47835794 47926025 + MGP_NODShiLtJ_P0047473 Cyp39a1 protein_coding protein_coding MGP_NODShiLtJ_T0047808.1 MGP_NODShiLtJ_G0023692.1 mouse_genomes_project 17 53038174 53049001 + MGP_NODShiLtJ_P0047808 B430306N03Rik protein_coding protein_coding MGP_NODShiLtJ_T0047809.1 MGP_NODShiLtJ_G0023692.1 mouse_genomes_project 17 53038198 53047474 + MGP_NODShiLtJ_P0047809 B430306N03Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047810.1 MGP_NODShiLtJ_G0023692.1 mouse_genomes_project 17 53038442 53046146 + MGP_NODShiLtJ_P0047810 B430306N03Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048255.1 MGP_NODShiLtJ_G0023849.1 mouse_genomes_project 17 82974394 83013298 - MGP_NODShiLtJ_P0048255 Nlrc4 protein_coding protein_coding MGP_NODShiLtJ_T0047815.1 MGP_NODShiLtJ_G0023694.1 mouse_genomes_project 17 53090391 53097854 + MGP_NODShiLtJ_P0047815 Treml1 protein_coding protein_coding MGP_NODShiLtJ_T0047816.1 MGP_NODShiLtJ_G0023694.1 mouse_genomes_project 17 53090412 53097596 + MGP_NODShiLtJ_P0047816 Treml1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046164.1 MGP_NODShiLtJ_G0023251.1 mouse_genomes_project 17 29121581 29151675 + Zfp523 protein_coding retained_intron MGP_NODShiLtJ_T0046165.1 MGP_NODShiLtJ_G0023251.1 mouse_genomes_project 17 29121713 29151675 + MGP_NODShiLtJ_P0046165 Zfp523 protein_coding protein_coding MGP_NODShiLtJ_T0046166.1 MGP_NODShiLtJ_G0023251.1 mouse_genomes_project 17 29121792 29151673 + MGP_NODShiLtJ_P0046166 Zfp523 protein_coding protein_coding MGP_NODShiLtJ_T0046167.1 MGP_NODShiLtJ_G0023251.1 mouse_genomes_project 17 29134301 29142171 + Zfp523 protein_coding processed_transcript MGP_NODShiLtJ_T0046168.1 MGP_NODShiLtJ_G0023251.1 mouse_genomes_project 17 29142155 29148267 + MGP_NODShiLtJ_P0046168 Zfp523 protein_coding protein_coding MGP_NODShiLtJ_T0046169.1 MGP_NODShiLtJ_G0023251.1 mouse_genomes_project 17 29148079 29150951 + MGP_NODShiLtJ_P0046169 Zfp523 protein_coding protein_coding MGP_NODShiLtJ_T0046170.1 MGP_NODShiLtJ_G0023251.1 mouse_genomes_project 17 29148254 29151675 + MGP_NODShiLtJ_P0046170 Zfp523 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046171.1 MGP_NODShiLtJ_G0023251.1 mouse_genomes_project 17 29149897 29151096 + Zfp523 protein_coding retained_intron MGP_NODShiLtJ_T0046030.1 MGP_NODShiLtJ_G0023218.1 mouse_genomes_project 17 27150903 27178954 + MGP_NODShiLtJ_P0046030 Neurl1b protein_coding protein_coding MGP_NODShiLtJ_T0046031.1 MGP_NODShiLtJ_G0023218.1 mouse_genomes_project 17 27150984 27183452 + MGP_NODShiLtJ_P0046031 Neurl1b protein_coding protein_coding MGP_NODShiLtJ_T0046032.1 MGP_NODShiLtJ_G0023218.1 mouse_genomes_project 17 27151039 27178954 + MGP_NODShiLtJ_P0046032 Neurl1b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046033.1 MGP_NODShiLtJ_G0023218.1 mouse_genomes_project 17 27169278 27179001 + MGP_NODShiLtJ_P0046033 Neurl1b protein_coding protein_coding MGP_NODShiLtJ_T0046327.1 MGP_NODShiLtJ_G0023282.1 mouse_genomes_project 17 30637467 30643972 + MGP_NODShiLtJ_P0046327 Pim1 protein_coding protein_coding MGP_NODShiLtJ_T0003724.1 MGP_NODShiLtJ_G0003345.1 mouse_genomes_project 17 62909909 62914842 + Gm17168 antisense antisense MGP_NODShiLtJ_T0045842.1 MGP_NODShiLtJ_G0023176.1 mouse_genomes_project 17 26227687 26232482 - MGP_NODShiLtJ_P0045842 Sox8 protein_coding protein_coding MGP_NODShiLtJ_T0045843.1 MGP_NODShiLtJ_G0023176.1 mouse_genomes_project 17 26229783 26232010 - MGP_NODShiLtJ_P0045843 Sox8 protein_coding protein_coding MGP_NODShiLtJ_T0045844.1 MGP_NODShiLtJ_G0023176.1 mouse_genomes_project 17 26230505 26232482 - MGP_NODShiLtJ_P0045844 Sox8 protein_coding protein_coding MGP_NODShiLtJ_T0100247.1 MGP_NODShiLtJ_G0038641.1 mouse_genomes_project 17 25330694 25330822 - Snora78 snoRNA snoRNA MGP_NODShiLtJ_T0006877.1 MGP_NODShiLtJ_G0005655.1 mouse_genomes_project 17 35647390 38390541 + lincRNA lincRNA MGP_NODShiLtJ_T0006887.1 MGP_NODShiLtJ_G0005655.1 mouse_genomes_project 17 38136363 38389762 + lincRNA lincRNA MGP_NODShiLtJ_T0006888.1 MGP_NODShiLtJ_G0005655.1 mouse_genomes_project 17 38136363 38389763 + lincRNA lincRNA MGP_NODShiLtJ_T0013114.1 MGP_NODShiLtJ_G0011222.1 mouse_genomes_project 17 35851081 35851294 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046374.1 MGP_NODShiLtJ_G0023297.1 mouse_genomes_project 17 32338711 32401231 + MGP_NODShiLtJ_P0046374 Abcg1 protein_coding protein_coding MGP_NODShiLtJ_T0046375.1 MGP_NODShiLtJ_G0023297.1 mouse_genomes_project 17 32338787 32384608 + Abcg1 protein_coding retained_intron MGP_NODShiLtJ_T0046766.1 MGP_NODShiLtJ_G0023388.1 mouse_genomes_project 17 35955790 35963441 + MGP_NODShiLtJ_P0046766 H2-Ob protein_coding protein_coding MGP_NODShiLtJ_T0046767.1 MGP_NODShiLtJ_G0023388.1 mouse_genomes_project 17 35955792 35959079 + H2-Ob protein_coding retained_intron MGP_NODShiLtJ_T0046768.1 MGP_NODShiLtJ_G0023388.1 mouse_genomes_project 17 35955818 35963332 + MGP_NODShiLtJ_P0046768 H2-Ob protein_coding protein_coding MGP_NODShiLtJ_T0046769.1 MGP_NODShiLtJ_G0023388.1 mouse_genomes_project 17 35957593 35962006 + MGP_NODShiLtJ_P0046769 H2-Ob protein_coding protein_coding MGP_NODShiLtJ_T0045213.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 8777181 9552198 + Park2 protein_coding retained_intron MGP_NODShiLtJ_T0045214.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 8777181 9552198 + Park2 protein_coding retained_intron MGP_NODShiLtJ_T0045215.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 8777181 10090661 + MGP_NODShiLtJ_P0045215 Park2 protein_coding protein_coding MGP_NODShiLtJ_T0045216.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 8777188 8901600 + Park2 protein_coding processed_transcript MGP_NODShiLtJ_T0045217.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 9033394 9488959 + MGP_NODShiLtJ_P0045217 Park2 protein_coding protein_coding MGP_NODShiLtJ_T0045218.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 9280084 9608082 + MGP_NODShiLtJ_P0045218 Park2 protein_coding protein_coding MGP_NODShiLtJ_T0045219.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 9841282 10090661 + MGP_NODShiLtJ_P0045219 Park2 protein_coding protein_coding MGP_NODShiLtJ_T0045220.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 9853620 9877601 + Park2 protein_coding processed_transcript MGP_NODShiLtJ_T0045221.1 MGP_NODShiLtJ_G0022967.1 mouse_genomes_project 17 10055561 10090656 + Park2 protein_coding processed_transcript MGP_NODShiLtJ_T0045269.1 MGP_NODShiLtJ_G0022983.1 mouse_genomes_project 17 11155697 11179011 + MGP_NODShiLtJ_P0045269 Sod2 protein_coding protein_coding MGP_NODShiLtJ_T0048070.1 MGP_NODShiLtJ_G0023792.1 mouse_genomes_project 17 71317450 71317942 - MGP_NODShiLtJ_P0048070 A930002H24Rik protein_coding protein_coding MGP_NODShiLtJ_T0010090.1 MGP_NODShiLtJ_G0008223.1 mouse_genomes_project 17 27732806 27732874 + Mir6968 miRNA miRNA MGP_NODShiLtJ_T0048300.1 MGP_NODShiLtJ_G0023860.1 mouse_genomes_project 17 88206541 88303001 - MGP_NODShiLtJ_P0048300 Heatr5b protein_coding protein_coding MGP_NODShiLtJ_T0003679.1 MGP_NODShiLtJ_G0003313.1 mouse_genomes_project 17 29999395 30011628 + Gm16191 antisense antisense MGP_NODShiLtJ_T0003680.1 MGP_NODShiLtJ_G0003313.1 mouse_genomes_project 17 30008286 30008968 + Gm16191 antisense antisense MGP_NODShiLtJ_T0048405.1 MGP_NODShiLtJ_G0023907.1 mouse_genomes_project 17 95214237 95240923 - MGP_NODShiLtJ_P0048405 Prepl protein_coding protein_coding MGP_NODShiLtJ_T0048406.1 MGP_NODShiLtJ_G0023907.1 mouse_genomes_project 17 95214237 95240923 - MGP_NODShiLtJ_P0048406 Prepl protein_coding protein_coding MGP_NODShiLtJ_T0006884.1 MGP_NODShiLtJ_G0005662.1 mouse_genomes_project 17 37746999 37768028 - Gm20442 lincRNA lincRNA MGP_NODShiLtJ_T0047855.1 MGP_NODShiLtJ_G0023703.1 mouse_genomes_project 17 54422090 54571406 + Kif6 protein_coding retained_intron MGP_NODShiLtJ_T0047856.1 MGP_NODShiLtJ_G0023703.1 mouse_genomes_project 17 54422093 54488349 + MGP_NODShiLtJ_P0047856 Kif6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047857.1 MGP_NODShiLtJ_G0023703.1 mouse_genomes_project 17 54422126 54740565 + MGP_NODShiLtJ_P0047857 Kif6 protein_coding protein_coding MGP_NODShiLtJ_T0047858.1 MGP_NODShiLtJ_G0023703.1 mouse_genomes_project 17 54527810 54571406 + Kif6 protein_coding retained_intron MGP_NODShiLtJ_T0047859.1 MGP_NODShiLtJ_G0023703.1 mouse_genomes_project 17 54553552 54571408 + Kif6 protein_coding retained_intron MGP_NODShiLtJ_T0047860.1 MGP_NODShiLtJ_G0023703.1 mouse_genomes_project 17 54569928 54575055 + Kif6 protein_coding retained_intron MGP_NODShiLtJ_T0047861.1 MGP_NODShiLtJ_G0023703.1 mouse_genomes_project 17 54715498 54740565 + Kif6 protein_coding retained_intron MGP_NODShiLtJ_T0017424.1 MGP_NODShiLtJ_G0015218.1 mouse_genomes_project 17 36428709 36442526 - Gm20460 processed_transcript processed_transcript MGP_NODShiLtJ_T0045495.1 MGP_NODShiLtJ_G0023084.1 mouse_genomes_project 17 24152351 24153786 - MGP_NODShiLtJ_P0045495 Cldn9 protein_coding protein_coding MGP_NODShiLtJ_T0048098.1 MGP_NODShiLtJ_G0023802.1 mouse_genomes_project 17 73487622 73529523 - MGP_NODShiLtJ_P0048098 Ralbp1 protein_coding protein_coding MGP_NODShiLtJ_T0048099.1 MGP_NODShiLtJ_G0023802.1 mouse_genomes_project 17 73487622 73528691 - MGP_NODShiLtJ_P0048099 Ralbp1 protein_coding protein_coding MGP_NODShiLtJ_T0048438.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97613752 97713756 + MGP_NODShiLtJ_P0048438 Ttc7 protein_coding protein_coding MGP_NODShiLtJ_T0048439.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97613759 97623776 + Ttc7 protein_coding processed_transcript MGP_NODShiLtJ_T0048440.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97613771 97703887 + MGP_NODShiLtJ_P0048440 Ttc7 protein_coding protein_coding MGP_NODShiLtJ_T0048441.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97613817 97693900 + MGP_NODShiLtJ_P0048441 Ttc7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048442.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97623657 97712073 + MGP_NODShiLtJ_P0048442 Ttc7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048443.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97640510 97662088 + Ttc7 protein_coding processed_transcript MGP_NODShiLtJ_T0048444.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97654228 97666309 + Ttc7 protein_coding retained_intron MGP_NODShiLtJ_T0048445.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97662224 97671933 + Ttc7 protein_coding processed_transcript MGP_NODShiLtJ_T0048446.1 MGP_NODShiLtJ_G0023922.1 mouse_genomes_project 17 97710839 97713756 + Ttc7 protein_coding processed_transcript MGP_NODShiLtJ_T0045423.1 MGP_NODShiLtJ_G0023051.1 mouse_genomes_project 17 21496922 21537571 + MGP_NODShiLtJ_P0045423 Zfp53 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013148.1 MGP_NODShiLtJ_G0011256.1 mouse_genomes_project 17 58568838 58574359 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047614.1 MGP_NODShiLtJ_G0023633.1 mouse_genomes_project 17 50680687 50683802 + MGP_NODShiLtJ_P0047614 Lrrc73 protein_coding protein_coding MGP_NODShiLtJ_T0046725.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35829931 35839637 - MGP_NODShiLtJ_P0046725 Brd2 protein_coding protein_coding MGP_NODShiLtJ_T0046726.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35829931 35840210 - MGP_NODShiLtJ_P0046726 Brd2 protein_coding protein_coding MGP_NODShiLtJ_T0046727.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35829938 35838302 - MGP_NODShiLtJ_P0046727 Brd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046728.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35830274 35836380 - MGP_NODShiLtJ_P0046728 Brd2 protein_coding protein_coding MGP_NODShiLtJ_T0046729.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35830595 35831641 - Brd2 protein_coding retained_intron MGP_NODShiLtJ_T0046730.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35831667 35832859 - Brd2 protein_coding retained_intron MGP_NODShiLtJ_T0046731.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35831669 35832885 - MGP_NODShiLtJ_P0046731 Brd2 protein_coding protein_coding MGP_NODShiLtJ_T0046732.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35831704 35832984 - MGP_NODShiLtJ_P0046732 Brd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046733.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35831993 35839879 - MGP_NODShiLtJ_P0046733 Brd2 protein_coding protein_coding MGP_NODShiLtJ_T0046734.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35832671 35833378 - Brd2 protein_coding retained_intron MGP_NODShiLtJ_T0046735.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35837418 35839841 - Brd2 protein_coding processed_transcript MGP_NODShiLtJ_T0046736.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35837448 35840512 - Brd2 protein_coding processed_transcript MGP_NODShiLtJ_T0046737.1 MGP_NODShiLtJ_G0023379.1 mouse_genomes_project 17 35837757 35840527 - Brd2 protein_coding processed_transcript MGP_NODShiLtJ_T0013151.1 MGP_NODShiLtJ_G0011259.1 mouse_genomes_project 17 58974487 58975140 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100262.1 MGP_NODShiLtJ_G0038656.1 mouse_genomes_project 17 70605603 70605720 + Gm24730 snoRNA snoRNA MGP_NODShiLtJ_T0045393.1 MGP_NODShiLtJ_G0023030.1 mouse_genomes_project 17 20314953 20334975 - MGP_NODShiLtJ_P0045393 Vmn2r108 protein_coding protein_coding MGP_NODShiLtJ_T0010123.1 MGP_NODShiLtJ_G0008256.1 mouse_genomes_project 17 70757937 70758021 + Gm24813 miRNA miRNA MGP_NODShiLtJ_T0013130.1 MGP_NODShiLtJ_G0011238.1 mouse_genomes_project 17 39424567 39425234 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047015.1 MGP_NODShiLtJ_G0023440.1 mouse_genomes_project 17 37035981 37037462 - MGP_NODShiLtJ_P0047015 Ly6g5b protein_coding protein_coding MGP_NODShiLtJ_T0047016.1 MGP_NODShiLtJ_G0023440.1 mouse_genomes_project 17 37036015 37037462 - MGP_NODShiLtJ_P0047016 Ly6g5b protein_coding protein_coding MGP_NODShiLtJ_T0046180.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29276422 29295500 + MGP_NODShiLtJ_P0046180 Fance protein_coding protein_coding MGP_NODShiLtJ_T0046181.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29276439 29295500 + Fance protein_coding retained_intron MGP_NODShiLtJ_T0046182.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29276458 29295499 + MGP_NODShiLtJ_P0046182 Fance protein_coding protein_coding MGP_NODShiLtJ_T0046183.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29276464 29295501 + MGP_NODShiLtJ_P0046183 Fance protein_coding protein_coding MGP_NODShiLtJ_T0046184.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29276536 29295186 + MGP_NODShiLtJ_P0046184 Fance protein_coding protein_coding MGP_NODShiLtJ_T0046185.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29278981 29289763 + MGP_NODShiLtJ_P0046185 Fance protein_coding protein_coding MGP_NODShiLtJ_T0046186.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29279018 29280004 + Fance protein_coding retained_intron MGP_NODShiLtJ_T0046187.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29279914 29281134 + Fance protein_coding retained_intron MGP_NODShiLtJ_T0046188.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29280370 29287401 + Fance protein_coding processed_transcript MGP_NODShiLtJ_T0046189.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29280425 29295217 + MGP_NODShiLtJ_P0046189 Fance protein_coding protein_coding MGP_NODShiLtJ_T0046190.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29280724 29289747 + Fance protein_coding retained_intron MGP_NODShiLtJ_T0046191.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29280981 29295382 + MGP_NODShiLtJ_P0046191 Fance protein_coding protein_coding MGP_NODShiLtJ_T0046192.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29281210 29295432 + MGP_NODShiLtJ_P0046192 Fance protein_coding protein_coding MGP_NODShiLtJ_T0046193.1 MGP_NODShiLtJ_G0023254.1 mouse_genomes_project 17 29281319 29295500 + Fance protein_coding processed_transcript MGP_NODShiLtJ_T0013139.1 MGP_NODShiLtJ_G0011247.1 mouse_genomes_project 17 40653001 40653863 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047645.1 MGP_NODShiLtJ_G0023640.1 mouse_genomes_project 17 50885792 50886314 - MGP_NODShiLtJ_P0047645 Gm5093 protein_coding protein_coding MGP_NODShiLtJ_T0047294.1 MGP_NODShiLtJ_G0023506.1 mouse_genomes_project 17 39069115 39072509 + MGP_NODShiLtJ_P0047294 H2-M10.6 protein_coding protein_coding MGP_NODShiLtJ_T0047747.1 MGP_NODShiLtJ_G0023677.1 mouse_genomes_project 17 52262139 52269860 - MGP_NODShiLtJ_P0047747 Prickle4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045822.1 MGP_NODShiLtJ_G0023170.1 mouse_genomes_project 17 25986636 25988910 - MGP_NODShiLtJ_P0045822 Tpsab1 protein_coding protein_coding MGP_NODShiLtJ_T0045823.1 MGP_NODShiLtJ_G0023170.1 mouse_genomes_project 17 25986637 25988945 - Tpsab1 protein_coding processed_transcript MGP_NODShiLtJ_T0045353.1 MGP_NODShiLtJ_G0023006.1 mouse_genomes_project 17 16405788 16534082 - MGP_NODShiLtJ_P0045353 Lnpep protein_coding protein_coding MGP_NODShiLtJ_T0013108.1 MGP_NODShiLtJ_G0011216.1 mouse_genomes_project 17 28406083 28406429 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003686.1 MGP_NODShiLtJ_G0003316.1 mouse_genomes_project 17 34285425 34286609 + Gm17115 antisense antisense MGP_NODShiLtJ_T0047934.1 MGP_NODShiLtJ_G0023733.1 mouse_genomes_project 17 61858971 61882882 + MGP_NODShiLtJ_P0047934 Hdgfrp2 protein_coding protein_coding MGP_NODShiLtJ_T0047935.1 MGP_NODShiLtJ_G0023733.1 mouse_genomes_project 17 61859069 61882739 + MGP_NODShiLtJ_P0047935 Hdgfrp2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047632.1 MGP_NODShiLtJ_G0023637.1 mouse_genomes_project 17 50822851 50856626 + MGP_NODShiLtJ_P0047632 Zfp318 protein_coding protein_coding MGP_NODShiLtJ_T0047633.1 MGP_NODShiLtJ_G0023637.1 mouse_genomes_project 17 50822871 50862781 + MGP_NODShiLtJ_P0047633 Zfp318 protein_coding protein_coding MGP_NODShiLtJ_T0047634.1 MGP_NODShiLtJ_G0023637.1 mouse_genomes_project 17 50840764 50852482 + MGP_NODShiLtJ_P0047634 Zfp318 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047635.1 MGP_NODShiLtJ_G0023637.1 mouse_genomes_project 17 50846567 50851125 + Zfp318 protein_coding retained_intron MGP_NODShiLtJ_T0047636.1 MGP_NODShiLtJ_G0023637.1 mouse_genomes_project 17 50851392 50853085 + Zfp318 protein_coding retained_intron MGP_NODShiLtJ_T0003681.1 MGP_NODShiLtJ_G0003314.1 mouse_genomes_project 17 30733234 30750384 - Tbc1d22bos antisense antisense MGP_NODShiLtJ_T0003682.1 MGP_NODShiLtJ_G0003314.1 mouse_genomes_project 17 30741922 30750358 - Tbc1d22bos antisense antisense MGP_NODShiLtJ_T0048015.1 MGP_NODShiLtJ_G0023767.1 mouse_genomes_project 17 62850263 62852238 + MGP_NODShiLtJ_P0048015 Alkbh7 protein_coding protein_coding MGP_NODShiLtJ_T0048016.1 MGP_NODShiLtJ_G0023767.1 mouse_genomes_project 17 62850267 62852249 + MGP_NODShiLtJ_P0048016 Alkbh7 protein_coding protein_coding MGP_NODShiLtJ_T0048017.1 MGP_NODShiLtJ_G0023767.1 mouse_genomes_project 17 62851404 62852062 + Alkbh7 protein_coding retained_intron MGP_NODShiLtJ_T0048344.1 MGP_NODShiLtJ_G0023879.1 mouse_genomes_project 17 89802517 89805512 + Gemin6 protein_coding processed_transcript MGP_NODShiLtJ_T0048345.1 MGP_NODShiLtJ_G0023879.1 mouse_genomes_project 17 89802517 89807191 + MGP_NODShiLtJ_P0048345 Gemin6 protein_coding protein_coding MGP_NODShiLtJ_T0006836.1 MGP_NODShiLtJ_G0005622.1 mouse_genomes_project 17 10352598 10360973 + 4732491K20Rik lincRNA lincRNA MGP_NODShiLtJ_T0048256.1 MGP_NODShiLtJ_G0023850.1 mouse_genomes_project 17 83052286 83063731 + MGP_NODShiLtJ_P0048256 Yipf4 protein_coding protein_coding MGP_NODShiLtJ_T0047106.1 MGP_NODShiLtJ_G0023463.1 mouse_genomes_project 17 37524517 37525964 + MGP_NODShiLtJ_P0047106 Psors1c2 protein_coding protein_coding MGP_NODShiLtJ_T0006905.1 MGP_NODShiLtJ_G0005675.1 mouse_genomes_project 17 57249175 57263623 + Gm19585 lincRNA lincRNA MGP_NODShiLtJ_T0006906.1 MGP_NODShiLtJ_G0005675.1 mouse_genomes_project 17 57259825 57263418 + Gm19585 lincRNA lincRNA MGP_NODShiLtJ_T0045825.1 MGP_NODShiLtJ_G0023172.1 mouse_genomes_project 17 26013918 26019054 + MGP_NODShiLtJ_P0045825 Tpsg1 protein_coding protein_coding MGP_NODShiLtJ_T0045826.1 MGP_NODShiLtJ_G0023172.1 mouse_genomes_project 17 26013934 26018763 + MGP_NODShiLtJ_P0045826 Tpsg1 protein_coding protein_coding MGP_NODShiLtJ_T0045827.1 MGP_NODShiLtJ_G0023172.1 mouse_genomes_project 17 26015162 26019054 + MGP_NODShiLtJ_P0045827 Tpsg1 protein_coding protein_coding MGP_NODShiLtJ_T0045828.1 MGP_NODShiLtJ_G0023172.1 mouse_genomes_project 17 26015193 26019056 + MGP_NODShiLtJ_P0045828 Tpsg1 protein_coding protein_coding MGP_NODShiLtJ_T0045829.1 MGP_NODShiLtJ_G0023172.1 mouse_genomes_project 17 26017622 26018999 + MGP_NODShiLtJ_P0045829 Tpsg1 protein_coding protein_coding MGP_NODShiLtJ_T0046111.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28464558 28511447 - MGP_NODShiLtJ_P0046111 Nudt3 protein_coding protein_coding MGP_NODShiLtJ_T0046112.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28465750 28510946 - MGP_NODShiLtJ_P0046112 Nudt3 protein_coding protein_coding MGP_NODShiLtJ_T0046113.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28465881 28468496 - Nudt3 protein_coding retained_intron MGP_NODShiLtJ_T0046114.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28465964 28511245 - MGP_NODShiLtJ_P0046114 Nudt3 protein_coding protein_coding MGP_NODShiLtJ_T0046115.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28466009 28510375 - Nudt3 protein_coding processed_transcript MGP_NODShiLtJ_T0046116.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28466128 28498669 - Nudt3 protein_coding processed_transcript MGP_NODShiLtJ_T0046117.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28467137 28511245 - MGP_NODShiLtJ_P0046117 Nudt3 protein_coding protein_coding MGP_NODShiLtJ_T0046118.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28467210 28510826 - MGP_NODShiLtJ_P0046118 Nudt3 protein_coding protein_coding MGP_NODShiLtJ_T0046119.1 MGP_NODShiLtJ_G0023240.1 mouse_genomes_project 17 28483225 28511245 - Nudt3 protein_coding retained_intron MGP_NODShiLtJ_T0046012.1 MGP_NODShiLtJ_G0023214.1 mouse_genomes_project 17 26928476 26966970 - MGP_NODShiLtJ_P0046012 Fam234a protein_coding protein_coding MGP_NODShiLtJ_T0046013.1 MGP_NODShiLtJ_G0023214.1 mouse_genomes_project 17 26929367 26966889 - MGP_NODShiLtJ_P0046013 Fam234a protein_coding protein_coding MGP_NODShiLtJ_T0046014.1 MGP_NODShiLtJ_G0023214.1 mouse_genomes_project 17 26930198 26932889 - MGP_NODShiLtJ_P0046014 Fam234a protein_coding protein_coding MGP_NODShiLtJ_T0046015.1 MGP_NODShiLtJ_G0023214.1 mouse_genomes_project 17 26931861 26933613 - Fam234a protein_coding retained_intron MGP_NODShiLtJ_T0046016.1 MGP_NODShiLtJ_G0023214.1 mouse_genomes_project 17 26934933 26937235 - MGP_NODShiLtJ_P0046016 Fam234a protein_coding protein_coding MGP_NODShiLtJ_T0047811.1 MGP_NODShiLtJ_G0023693.1 mouse_genomes_project 17 53076027 53081902 + MGP_NODShiLtJ_P0047811 Trem2 protein_coding protein_coding MGP_NODShiLtJ_T0047812.1 MGP_NODShiLtJ_G0023693.1 mouse_genomes_project 17 53076066 53083774 + Trem2 protein_coding retained_intron MGP_NODShiLtJ_T0047813.1 MGP_NODShiLtJ_G0023693.1 mouse_genomes_project 17 53076114 53081902 + MGP_NODShiLtJ_P0047813 Trem2 protein_coding protein_coding MGP_NODShiLtJ_T0047814.1 MGP_NODShiLtJ_G0023693.1 mouse_genomes_project 17 53076115 53080185 + Trem2 protein_coding processed_transcript MGP_NODShiLtJ_T0100258.1 MGP_NODShiLtJ_G0038652.1 mouse_genomes_project 17 53391022 53391154 + Gm24071 snoRNA snoRNA MGP_NODShiLtJ_T0006864.1 MGP_NODShiLtJ_G0005646.1 mouse_genomes_project 17 30151687 30175775 - Trp53cor1 lincRNA lincRNA MGP_NODShiLtJ_T0045864.1 MGP_NODShiLtJ_G0023180.1 mouse_genomes_project 17 26393494 26398114 + MGP_NODShiLtJ_P0045864 Rpusd1 protein_coding protein_coding MGP_NODShiLtJ_T0045394.1 MGP_NODShiLtJ_G0023031.1 mouse_genomes_project 17 20314962 20504477 - MGP_NODShiLtJ_P0045394 Vmn2r110 protein_coding protein_coding MGP_NODShiLtJ_T0046738.1 MGP_NODShiLtJ_G0023380.1 mouse_genomes_project 17 35852938 35856854 + MGP_NODShiLtJ_P0046738 H2-DMa protein_coding protein_coding MGP_NODShiLtJ_T0046739.1 MGP_NODShiLtJ_G0023380.1 mouse_genomes_project 17 35854780 35855933 + H2-DMa protein_coding retained_intron MGP_NODShiLtJ_T0045666.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25304431 25308733 + MGP_NODShiLtJ_P0045666 Noxo1 protein_coding protein_coding MGP_NODShiLtJ_T0045668.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25306226 25306559 + Noxo1 protein_coding processed_transcript MGP_NODShiLtJ_T0045669.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25306379 25307606 + Noxo1 protein_coding processed_transcript MGP_NODShiLtJ_T0045670.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25306436 25308729 + Noxo1 protein_coding retained_intron MGP_NODShiLtJ_T0045671.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25306442 25308517 + Noxo1 protein_coding retained_intron MGP_NODShiLtJ_T0045672.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25306515 25307370 + Noxo1 protein_coding retained_intron MGP_NODShiLtJ_T0045673.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25306544 25307882 + Noxo1 protein_coding processed_transcript MGP_NODShiLtJ_T0045674.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25306729 25308728 + Noxo1 protein_coding processed_transcript MGP_NODShiLtJ_T0045675.1 MGP_NODShiLtJ_G0023134.1 mouse_genomes_project 17 25307596 25308720 + Noxo1 protein_coding processed_transcript MGP_NODShiLtJ_T0101705.1 MGP_NODShiLtJ_G0039874.1 mouse_genomes_project 17 21199507 21200020 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048353.1 MGP_NODShiLtJ_G0023885.1 mouse_genomes_project 17 90156453 90182237 - MGP_NODShiLtJ_P0048353 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0013085.1 MGP_NODShiLtJ_G0011193.1 mouse_genomes_project 17 6495767 6496323 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046642.1 MGP_NODShiLtJ_G0023365.1 mouse_genomes_project 17 35599912 35601149 + MGP_NODShiLtJ_P0046642 Zbtb22 protein_coding protein_coding MGP_NODShiLtJ_T0046643.1 MGP_NODShiLtJ_G0023365.1 mouse_genomes_project 17 35600179 35603331 + MGP_NODShiLtJ_P0046643 Zbtb22 protein_coding protein_coding MGP_NODShiLtJ_T0006915.1 MGP_NODShiLtJ_G0005681.1 mouse_genomes_project 17 77380752 77384983 + C030034I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0006916.1 MGP_NODShiLtJ_G0005681.1 mouse_genomes_project 17 77380811 77382282 + C030034I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0013152.1 MGP_NODShiLtJ_G0011260.1 mouse_genomes_project 17 59018284 59019285 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046567.1 MGP_NODShiLtJ_G0023351.1 mouse_genomes_project 17 35247384 35250084 + MGP_NODShiLtJ_P0046567 Zfp414 protein_coding protein_coding MGP_NODShiLtJ_T0046568.1 MGP_NODShiLtJ_G0023351.1 mouse_genomes_project 17 35247384 35250021 + MGP_NODShiLtJ_P0046568 Zfp414 protein_coding protein_coding MGP_NODShiLtJ_T0046569.1 MGP_NODShiLtJ_G0023351.1 mouse_genomes_project 17 35247395 35249262 + Zfp414 protein_coding retained_intron MGP_NODShiLtJ_T0046570.1 MGP_NODShiLtJ_G0023351.1 mouse_genomes_project 17 35247415 35249769 + MGP_NODShiLtJ_P0046570 Zfp414 protein_coding protein_coding MGP_NODShiLtJ_T0046571.1 MGP_NODShiLtJ_G0023351.1 mouse_genomes_project 17 35247723 35248299 + MGP_NODShiLtJ_P0046571 Zfp414 protein_coding protein_coding MGP_NODShiLtJ_T0046572.1 MGP_NODShiLtJ_G0023351.1 mouse_genomes_project 17 35248495 35249076 + Zfp414 protein_coding retained_intron MGP_NODShiLtJ_T0046573.1 MGP_NODShiLtJ_G0023351.1 mouse_genomes_project 17 35249393 35249995 + Zfp414 protein_coding retained_intron MGP_NODShiLtJ_T0098984.1 MGP_NODShiLtJ_G0037378.1 mouse_genomes_project 17 1856406 1856513 + Gm23186 snRNA snRNA MGP_NODShiLtJ_T0006933.1 MGP_NODShiLtJ_G0005694.1 mouse_genomes_project 17 97844934 97856753 + Gm28676 lincRNA lincRNA MGP_NODShiLtJ_T0013165.1 MGP_NODShiLtJ_G0011273.1 mouse_genomes_project 17 75681415 75682353 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047700.1 MGP_NODShiLtJ_G0023664.1 mouse_genomes_project 17 51524359 51524621 - MGP_NODShiLtJ_P0047700 protein_coding protein_coding MGP_NODShiLtJ_T0048518.1 MGP_NODShiLtJ_G0023938.1 mouse_genomes_project 17 101918282 101919181 + MGP_NODShiLtJ_P0048518 Gm10308 protein_coding protein_coding MGP_NODShiLtJ_T0047383.1 MGP_NODShiLtJ_G0023540.1 mouse_genomes_project 17 39873505 39881248 + MGP_NODShiLtJ_P0047383 protein_coding protein_coding MGP_NODShiLtJ_T0101727.1 MGP_NODShiLtJ_G0039896.1 mouse_genomes_project 17 36610443 36613080 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048109.1 MGP_NODShiLtJ_G0023805.1 mouse_genomes_project 17 73752911 73777909 - MGP_NODShiLtJ_P0048109 Ndufv2 protein_coding protein_coding MGP_NODShiLtJ_T0048110.1 MGP_NODShiLtJ_G0023805.1 mouse_genomes_project 17 73753719 73777939 - MGP_NODShiLtJ_P0048110 Ndufv2 protein_coding protein_coding MGP_NODShiLtJ_T0048111.1 MGP_NODShiLtJ_G0023805.1 mouse_genomes_project 17 73761004 73777953 - MGP_NODShiLtJ_P0048111 Ndufv2 protein_coding protein_coding MGP_NODShiLtJ_T0048298.1 MGP_NODShiLtJ_G0023859.1 mouse_genomes_project 17 88097963 88188344 - MGP_NODShiLtJ_P0048298 Strn protein_coding protein_coding MGP_NODShiLtJ_T0048299.1 MGP_NODShiLtJ_G0023859.1 mouse_genomes_project 17 88112170 88130102 - MGP_NODShiLtJ_P0048299 Strn protein_coding protein_coding MGP_NODShiLtJ_T0046105.1 MGP_NODShiLtJ_G0023238.1 mouse_genomes_project 17 28442652 28446855 + MGP_NODShiLtJ_P0046105 protein_coding protein_coding MGP_NODShiLtJ_T0046106.1 MGP_NODShiLtJ_G0023238.1 mouse_genomes_project 17 28446255 28446375 + MGP_NODShiLtJ_P0046106 protein_coding protein_coding MGP_NODShiLtJ_T0000969.1 MGP_NODShiLtJ_G0000895.1 mouse_genomes_project 17 56926231 56928136 + TEC TEC MGP_NODShiLtJ_T0047423.1 MGP_NODShiLtJ_G0023574.1 mouse_genomes_project 17 42474081 43390688 + MGP_NODShiLtJ_P0047423 Esp38 protein_coding protein_coding MGP_NODShiLtJ_T0046600.1 MGP_NODShiLtJ_G0023357.1 mouse_genomes_project 17 35453148 35466635 + MGP_NODShiLtJ_P0046600 Kank3 protein_coding protein_coding MGP_NODShiLtJ_T0046601.1 MGP_NODShiLtJ_G0023357.1 mouse_genomes_project 17 35453151 35466634 + MGP_NODShiLtJ_P0046601 Kank3 protein_coding protein_coding MGP_NODShiLtJ_T0046602.1 MGP_NODShiLtJ_G0023357.1 mouse_genomes_project 17 35453151 35466631 + MGP_NODShiLtJ_P0046602 Kank3 protein_coding protein_coding MGP_NODShiLtJ_T0046603.1 MGP_NODShiLtJ_G0023357.1 mouse_genomes_project 17 35453157 35465875 + Kank3 protein_coding retained_intron MGP_NODShiLtJ_T0046605.1 MGP_NODShiLtJ_G0023357.1 mouse_genomes_project 17 35465546 35465992 + Kank3 protein_coding retained_intron MGP_NODShiLtJ_T0046606.1 MGP_NODShiLtJ_G0023357.1 mouse_genomes_project 17 35465859 35466634 + MGP_NODShiLtJ_P0046606 Kank3 protein_coding protein_coding MGP_NODShiLtJ_T0046956.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36915911 36931054 + MGP_NODShiLtJ_P0046956 Vars protein_coding protein_coding MGP_NODShiLtJ_T0046957.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36915975 36930762 + MGP_NODShiLtJ_P0046957 Vars protein_coding protein_coding MGP_NODShiLtJ_T0046958.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36916241 36919721 + MGP_NODShiLtJ_P0046958 Vars protein_coding protein_coding MGP_NODShiLtJ_T0046959.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36917569 36919771 + MGP_NODShiLtJ_P0046959 Vars protein_coding protein_coding MGP_NODShiLtJ_T0046960.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36917626 36931054 + Vars protein_coding retained_intron MGP_NODShiLtJ_T0046961.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36919212 36919980 + Vars protein_coding retained_intron MGP_NODShiLtJ_T0046962.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36919630 36920248 + Vars protein_coding retained_intron MGP_NODShiLtJ_T0046963.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36925937 36927122 + Vars protein_coding retained_intron MGP_NODShiLtJ_T0046964.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36926886 36927805 + Vars protein_coding retained_intron MGP_NODShiLtJ_T0046965.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36928005 36929189 + Vars protein_coding retained_intron MGP_NODShiLtJ_T0046966.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36928546 36929767 + MGP_NODShiLtJ_P0046966 Vars protein_coding protein_coding MGP_NODShiLtJ_T0046967.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36928555 36929557 + Vars protein_coding retained_intron MGP_NODShiLtJ_T0046968.1 MGP_NODShiLtJ_G0023427.1 mouse_genomes_project 17 36929684 36930743 + Vars protein_coding retained_intron MGP_NODShiLtJ_T0048424.1 MGP_NODShiLtJ_G0023917.1 mouse_genomes_project 17 97273022 97311530 + MGP_NODShiLtJ_P0048424 Rhoq protein_coding protein_coding MGP_NODShiLtJ_T0048425.1 MGP_NODShiLtJ_G0023917.1 mouse_genomes_project 17 97273232 97306561 + MGP_NODShiLtJ_P0048425 Rhoq protein_coding protein_coding MGP_NODShiLtJ_T0101731.1 MGP_NODShiLtJ_G0039900.1 mouse_genomes_project 17 37980796 37987576 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046236.1 MGP_NODShiLtJ_G0023264.1 mouse_genomes_project 17 29666308 29736960 - MGP_NODShiLtJ_P0046236 Slc26a8 protein_coding protein_coding MGP_NODShiLtJ_T0046237.1 MGP_NODShiLtJ_G0023264.1 mouse_genomes_project 17 29679306 29735789 - Slc26a8 protein_coding retained_intron MGP_NODShiLtJ_T0045168.1 MGP_NODShiLtJ_G0022956.1 mouse_genomes_project 17 5919232 5942971 + MGP_NODShiLtJ_P0045168 Ccr6 protein_coding protein_coding MGP_NODShiLtJ_T0045169.1 MGP_NODShiLtJ_G0022956.1 mouse_genomes_project 17 5925633 5942971 + MGP_NODShiLtJ_P0045169 Ccr6 protein_coding protein_coding MGP_NODShiLtJ_T0045170.1 MGP_NODShiLtJ_G0022956.1 mouse_genomes_project 17 5926915 5942971 + MGP_NODShiLtJ_P0045170 Ccr6 protein_coding protein_coding MGP_NODShiLtJ_T0045171.1 MGP_NODShiLtJ_G0022956.1 mouse_genomes_project 17 5926915 5942971 + MGP_NODShiLtJ_P0045171 Ccr6 protein_coding protein_coding MGP_NODShiLtJ_T0045172.1 MGP_NODShiLtJ_G0022956.1 mouse_genomes_project 17 5926915 5942971 + MGP_NODShiLtJ_P0045172 Ccr6 protein_coding protein_coding MGP_NODShiLtJ_T0045173.1 MGP_NODShiLtJ_G0022956.1 mouse_genomes_project 17 5926915 5942971 + MGP_NODShiLtJ_P0045173 Ccr6 protein_coding protein_coding MGP_NODShiLtJ_T0048193.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79344121 79401458 + Lpin2 protein_coding retained_intron MGP_NODShiLtJ_T0048194.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79345117 79398637 + MGP_NODShiLtJ_P0048194 Lpin2 protein_coding protein_coding MGP_NODShiLtJ_T0048195.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79345284 79387062 + Lpin2 protein_coding retained_intron MGP_NODShiLtJ_T0048196.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79369205 79397836 + MGP_NODShiLtJ_P0048196 Lpin2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048197.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79369327 79416172 + MGP_NODShiLtJ_P0048197 Lpin2 protein_coding protein_coding MGP_NODShiLtJ_T0048198.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79397763 79404434 + Lpin2 protein_coding retained_intron MGP_NODShiLtJ_T0048199.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79405010 79405749 + Lpin2 protein_coding retained_intron MGP_NODShiLtJ_T0048200.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79405020 79412801 + MGP_NODShiLtJ_P0048200 Lpin2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048201.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79406952 79411177 + Lpin2 protein_coding retained_intron MGP_NODShiLtJ_T0048202.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79407053 79409830 + Lpin2 protein_coding retained_intron MGP_NODShiLtJ_T0048203.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79408746 79412254 + Lpin2 protein_coding retained_intron MGP_NODShiLtJ_T0048204.1 MGP_NODShiLtJ_G0023826.1 mouse_genomes_project 17 79412377 79413662 + Lpin2 protein_coding retained_intron MGP_NODShiLtJ_T0010086.1 MGP_NODShiLtJ_G0008219.1 mouse_genomes_project 17 26452897 26452969 + Mir6966 miRNA miRNA MGP_NODShiLtJ_T0098990.1 MGP_NODShiLtJ_G0037384.1 mouse_genomes_project 17 30064685 30064857 - Gm23887 snRNA snRNA MGP_NODShiLtJ_T0003701.1 MGP_NODShiLtJ_G0003327.1 mouse_genomes_project 17 37705541 37709956 + Gm4577 antisense antisense MGP_NODShiLtJ_T0048289.1 MGP_NODShiLtJ_G0023854.1 mouse_genomes_project 17 84099586 84205221 + MGP_NODShiLtJ_P0048289 Rasgrp3 protein_coding protein_coding MGP_NODShiLtJ_T0048290.1 MGP_NODShiLtJ_G0023854.1 mouse_genomes_project 17 84134839 84205221 + MGP_NODShiLtJ_P0048290 Rasgrp3 protein_coding protein_coding MGP_NODShiLtJ_T0013140.1 MGP_NODShiLtJ_G0011248.1 mouse_genomes_project 17 41172508 41172638 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045796.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25880777 25882155 - Baiap3 protein_coding retained_intron MGP_NODShiLtJ_T0045797.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25880777 25894478 - MGP_NODShiLtJ_P0045797 Baiap3 protein_coding protein_coding MGP_NODShiLtJ_T0045798.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25881476 25892060 - MGP_NODShiLtJ_P0045798 Baiap3 protein_coding protein_coding MGP_NODShiLtJ_T0045799.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25881491 25882433 - MGP_NODShiLtJ_P0045799 Baiap3 protein_coding protein_coding MGP_NODShiLtJ_T0045800.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25881500 25894395 - MGP_NODShiLtJ_P0045800 Baiap3 protein_coding protein_coding MGP_NODShiLtJ_T0045801.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25881643 25894395 - MGP_NODShiLtJ_P0045801 Baiap3 protein_coding protein_coding MGP_NODShiLtJ_T0045802.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25882912 25883916 - Baiap3 protein_coding retained_intron MGP_NODShiLtJ_T0045803.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25884145 25886243 - Baiap3 protein_coding retained_intron MGP_NODShiLtJ_T0045804.1 MGP_NODShiLtJ_G0023165.1 mouse_genomes_project 17 25889128 25894388 - Baiap3 protein_coding retained_intron MGP_NODShiLtJ_T0048386.1 MGP_NODShiLtJ_G0023900.1 mouse_genomes_project 17 94623581 94741274 + MGP_NODShiLtJ_P0048386 Plekhh2 protein_coding protein_coding MGP_NODShiLtJ_T0047801.1 MGP_NODShiLtJ_G0023690.1 mouse_genomes_project 17 52983847 52994917 + MGP_NODShiLtJ_P0047801 Treml4 protein_coding protein_coding MGP_NODShiLtJ_T0047802.1 MGP_NODShiLtJ_G0023690.1 mouse_genomes_project 17 52983889 52994050 + MGP_NODShiLtJ_P0047802 Treml4 protein_coding protein_coding MGP_NODShiLtJ_T0047803.1 MGP_NODShiLtJ_G0023690.1 mouse_genomes_project 17 52983889 52994050 + MGP_NODShiLtJ_P0047803 Treml4 protein_coding protein_coding MGP_NODShiLtJ_T0047804.1 MGP_NODShiLtJ_G0023690.1 mouse_genomes_project 17 52983893 52994223 + MGP_NODShiLtJ_P0047804 Treml4 protein_coding protein_coding MGP_NODShiLtJ_T0047805.1 MGP_NODShiLtJ_G0023690.1 mouse_genomes_project 17 52983925 52994057 + MGP_NODShiLtJ_P0047805 Treml4 protein_coding protein_coding MGP_NODShiLtJ_T0047806.1 MGP_NODShiLtJ_G0023690.1 mouse_genomes_project 17 52991995 52994069 + Treml4 protein_coding retained_intron MGP_NODShiLtJ_T0046908.1 MGP_NODShiLtJ_G0023417.1 mouse_genomes_project 17 36745866 36774867 - MGP_NODShiLtJ_P0046908 protein_coding protein_coding MGP_NODShiLtJ_T0046909.1 MGP_NODShiLtJ_G0023417.1 mouse_genomes_project 17 36745880 36762661 - MGP_NODShiLtJ_P0046909 protein_coding protein_coding MGP_NODShiLtJ_T0048179.1 MGP_NODShiLtJ_G0023822.1 mouse_genomes_project 17 79071202 79071694 + MGP_NODShiLtJ_P0048179 Gm16519 protein_coding protein_coding MGP_NODShiLtJ_T0048474.1 MGP_NODShiLtJ_G0023932.1 mouse_genomes_project 17 99037048 99097304 + MGP_NODShiLtJ_P0048474 Ppp1r21 protein_coding protein_coding MGP_NODShiLtJ_T0048475.1 MGP_NODShiLtJ_G0023932.1 mouse_genomes_project 17 99037146 99051311 + Ppp1r21 protein_coding retained_intron MGP_NODShiLtJ_T0048476.1 MGP_NODShiLtJ_G0023932.1 mouse_genomes_project 17 99071644 99075332 + Ppp1r21 protein_coding retained_intron MGP_NODShiLtJ_T0048477.1 MGP_NODShiLtJ_G0023932.1 mouse_genomes_project 17 99084106 99086292 + Ppp1r21 protein_coding retained_intron MGP_NODShiLtJ_T0048478.1 MGP_NODShiLtJ_G0023932.1 mouse_genomes_project 17 99084224 99088140 + Ppp1r21 protein_coding retained_intron MGP_NODShiLtJ_T0048479.1 MGP_NODShiLtJ_G0023932.1 mouse_genomes_project 17 99087689 99097302 + Ppp1r21 protein_coding retained_intron MGP_NODShiLtJ_T0006838.1 MGP_NODShiLtJ_G0005624.1 mouse_genomes_project 17 13483251 13493581 + Gm28873 lincRNA lincRNA MGP_NODShiLtJ_T0048080.1 MGP_NODShiLtJ_G0023796.1 mouse_genomes_project 17 72376422 72381760 - MGP_NODShiLtJ_P0048080 4930583I09Rik protein_coding protein_coding MGP_NODShiLtJ_T0045429.1 MGP_NODShiLtJ_G0023057.1 mouse_genomes_project 17 21773265 21791163 + MGP_NODShiLtJ_P0045429 Zfp760 protein_coding protein_coding MGP_NODShiLtJ_T0046368.1 MGP_NODShiLtJ_G0023293.1 mouse_genomes_project 17 31818053 31839776 - MGP_NODShiLtJ_P0046368 Glo1 protein_coding protein_coding MGP_NODShiLtJ_T0045793.1 MGP_NODShiLtJ_G0023163.1 mouse_genomes_project 17 25871272 25878250 - MGP_NODShiLtJ_P0045793 Gnptg protein_coding protein_coding MGP_NODShiLtJ_T0045794.1 MGP_NODShiLtJ_G0023163.1 mouse_genomes_project 17 25872258 25878242 - MGP_NODShiLtJ_P0045794 Gnptg protein_coding protein_coding MGP_NODShiLtJ_T0046434.1 MGP_NODShiLtJ_G0023310.1 mouse_genomes_project 17 33023368 33035653 - MGP_NODShiLtJ_P0046434 U2af1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046435.1 MGP_NODShiLtJ_G0023310.1 mouse_genomes_project 17 33023373 33035671 - MGP_NODShiLtJ_P0046435 U2af1 protein_coding protein_coding MGP_NODShiLtJ_T0046436.1 MGP_NODShiLtJ_G0023310.1 mouse_genomes_project 17 33023373 33035671 - MGP_NODShiLtJ_P0046436 U2af1 protein_coding protein_coding MGP_NODShiLtJ_T0098291.1 MGP_NODShiLtJ_G0036697.1 mouse_genomes_project 17 82062672 82067302 - D630014O11Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0013104.1 MGP_NODShiLtJ_G0011212.1 mouse_genomes_project 17 24990847 24997400 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046493.1 MGP_NODShiLtJ_G0023323.1 mouse_genomes_project 17 33934293 33958348 + MGP_NODShiLtJ_P0046493 Cyp4f39 protein_coding protein_coding MGP_NODShiLtJ_T0099010.1 MGP_NODShiLtJ_G0037404.1 mouse_genomes_project 17 80821081 80821211 - Gm24736 snRNA snRNA MGP_NODShiLtJ_T0048219.1 MGP_NODShiLtJ_G0023831.1 mouse_genomes_project 17 79764861 79793877 + MGP_NODShiLtJ_P0048219 Spdya protein_coding protein_coding MGP_NODShiLtJ_T0048220.1 MGP_NODShiLtJ_G0023831.1 mouse_genomes_project 17 79764861 79804600 + MGP_NODShiLtJ_P0048220 Spdya protein_coding protein_coding MGP_NODShiLtJ_T0048221.1 MGP_NODShiLtJ_G0023831.1 mouse_genomes_project 17 79764872 79804600 + MGP_NODShiLtJ_P0048221 Spdya protein_coding protein_coding MGP_NODShiLtJ_T0048222.1 MGP_NODShiLtJ_G0023831.1 mouse_genomes_project 17 79769265 79803740 + MGP_NODShiLtJ_P0048222 Spdya protein_coding protein_coding MGP_NODShiLtJ_T0047662.1 MGP_NODShiLtJ_G0023647.1 mouse_genomes_project 17 51112943 51114366 + Mrpl2 protein_coding processed_transcript MGP_NODShiLtJ_T0047663.1 MGP_NODShiLtJ_G0023647.1 mouse_genomes_project 17 51112970 51116838 + MGP_NODShiLtJ_P0047663 Mrpl2 protein_coding protein_coding MGP_NODShiLtJ_T0047664.1 MGP_NODShiLtJ_G0023647.1 mouse_genomes_project 17 51113003 51116837 + MGP_NODShiLtJ_P0047664 Mrpl2 protein_coding protein_coding MGP_NODShiLtJ_T0047665.1 MGP_NODShiLtJ_G0023647.1 mouse_genomes_project 17 51115710 51116697 + Mrpl2 protein_coding processed_transcript MGP_NODShiLtJ_T0048423.1 MGP_NODShiLtJ_G0023916.1 mouse_genomes_project 17 97254345 97258126 - MGP_NODShiLtJ_P0048423 Atp6v1e2 protein_coding protein_coding MGP_NODShiLtJ_T0045520.1 MGP_NODShiLtJ_G0023092.1 mouse_genomes_project 17 24302776 24307039 - MGP_NODShiLtJ_P0045520 Tceb2 protein_coding protein_coding MGP_NODShiLtJ_T0097975.1 MGP_NODShiLtJ_G0036387.1 mouse_genomes_project 17 70495578 70495689 - Gm25348 rRNA rRNA MGP_NODShiLtJ_T0046989.1 MGP_NODShiLtJ_G0023432.1 mouse_genomes_project 17 36978617 36981581 + MGP_NODShiLtJ_P0046989 Ddah2 protein_coding protein_coding MGP_NODShiLtJ_T0046990.1 MGP_NODShiLtJ_G0023432.1 mouse_genomes_project 17 36979301 36980392 + MGP_NODShiLtJ_P0046990 Ddah2 protein_coding protein_coding MGP_NODShiLtJ_T0046991.1 MGP_NODShiLtJ_G0023432.1 mouse_genomes_project 17 36980378 36981111 + Ddah2 protein_coding retained_intron MGP_NODShiLtJ_T0101728.1 MGP_NODShiLtJ_G0039897.1 mouse_genomes_project 17 37111250 37115658 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045662.1 MGP_NODShiLtJ_G0023131.1 mouse_genomes_project 17 25274268 25288473 + MGP_NODShiLtJ_P0045662 Zfp598 protein_coding protein_coding MGP_NODShiLtJ_T0013150.1 MGP_NODShiLtJ_G0011258.1 mouse_genomes_project 17 58862926 58863409 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045821.1 MGP_NODShiLtJ_G0023169.1 mouse_genomes_project 17 25956213 25962865 + MGP_NODShiLtJ_P0045821 Prss29 protein_coding protein_coding MGP_NODShiLtJ_T0047163.1 MGP_NODShiLtJ_G0023474.1 mouse_genomes_project 17 37849677 37854074 - MGP_NODShiLtJ_P0047163 Tubb5 protein_coding protein_coding MGP_NODShiLtJ_T0047164.1 MGP_NODShiLtJ_G0023474.1 mouse_genomes_project 17 37851366 37852823 - Tubb5 protein_coding retained_intron MGP_NODShiLtJ_T0047165.1 MGP_NODShiLtJ_G0023474.1 mouse_genomes_project 17 37851662 37853976 - MGP_NODShiLtJ_P0047165 Tubb5 protein_coding protein_coding MGP_NODShiLtJ_T0047166.1 MGP_NODShiLtJ_G0023474.1 mouse_genomes_project 17 37852008 37853985 - Tubb5 protein_coding retained_intron MGP_NODShiLtJ_T0046260.1 MGP_NODShiLtJ_G0023269.1 mouse_genomes_project 17 29970083 29989562 - MGP_NODShiLtJ_P0046260 4930539E08Rik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046261.1 MGP_NODShiLtJ_G0023269.1 mouse_genomes_project 17 29970096 29989653 - MGP_NODShiLtJ_P0046261 4930539E08Rik protein_coding protein_coding MGP_NODShiLtJ_T0100259.1 MGP_NODShiLtJ_G0038653.1 mouse_genomes_project 17 60167692 60167829 + Gm26291 snoRNA snoRNA MGP_NODShiLtJ_T0003713.1 MGP_NODShiLtJ_G0003336.1 mouse_genomes_project 17 48959906 48963605 + Runx2os2 antisense antisense MGP_NODShiLtJ_T0013112.1 MGP_NODShiLtJ_G0011220.1 mouse_genomes_project 17 35673675 35673937 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100265.1 MGP_NODShiLtJ_G0038659.1 mouse_genomes_project 17 79867102 79867180 + Snord53 snoRNA snoRNA MGP_NODShiLtJ_T0046994.1 MGP_NODShiLtJ_G0023434.1 mouse_genomes_project 17 36986528 36990765 + MGP_NODShiLtJ_P0046994 Ly6g6c protein_coding protein_coding MGP_NODShiLtJ_T0046995.1 MGP_NODShiLtJ_G0023434.1 mouse_genomes_project 17 36988465 36991190 + MGP_NODShiLtJ_P0046995 Ly6g6c protein_coding protein_coding MGP_NODShiLtJ_T0046996.1 MGP_NODShiLtJ_G0023434.1 mouse_genomes_project 17 36988530 36990674 + MGP_NODShiLtJ_P0046996 Ly6g6c protein_coding protein_coding MGP_NODShiLtJ_T0045112.1 MGP_NODShiLtJ_G0022936.1 mouse_genomes_project 17 3132012 3228043 + MGP_NODShiLtJ_P0045112 Snx9 protein_coding protein_coding MGP_NODShiLtJ_T0045548.1 MGP_NODShiLtJ_G0023105.1 mouse_genomes_project 17 24575600 24584588 + MGP_NODShiLtJ_P0045548 Prss27 protein_coding protein_coding MGP_NODShiLtJ_T0045369.1 MGP_NODShiLtJ_G0023009.1 mouse_genomes_project 17 16790383 16802225 - MGP_NODShiLtJ_P0045369 Has1 protein_coding protein_coding MGP_NODShiLtJ_T0100267.1 MGP_NODShiLtJ_G0038661.1 mouse_genomes_project 17 81564278 81564383 + Gm25406 snoRNA snoRNA MGP_NODShiLtJ_T0047997.1 MGP_NODShiLtJ_G0023753.1 mouse_genomes_project 17 62440918 62454254 - MGP_NODShiLtJ_P0047997 Lonp1 protein_coding protein_coding MGP_NODShiLtJ_T0010118.1 MGP_NODShiLtJ_G0008251.1 mouse_genomes_project 17 53891163 53891308 - Gm44304 miRNA miRNA MGP_NODShiLtJ_T0099006.1 MGP_NODShiLtJ_G0037400.1 mouse_genomes_project 17 61365872 61365977 + Gm22654 snRNA snRNA MGP_NODShiLtJ_T0010098.1 MGP_NODShiLtJ_G0008231.1 mouse_genomes_project 17 29568142 29568203 - Mir6969 miRNA miRNA MGP_NODShiLtJ_T0013132.1 MGP_NODShiLtJ_G0011240.1 mouse_genomes_project 17 40373027 40375647 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047674.1 MGP_NODShiLtJ_G0023650.1 mouse_genomes_project 17 51142087 51148466 - MGP_NODShiLtJ_P0047674 Klhdc3 protein_coding protein_coding MGP_NODShiLtJ_T0047675.1 MGP_NODShiLtJ_G0023650.1 mouse_genomes_project 17 51142090 51148466 - MGP_NODShiLtJ_P0047675 Klhdc3 protein_coding protein_coding MGP_NODShiLtJ_T0047251.1 MGP_NODShiLtJ_G0023488.1 mouse_genomes_project 17 38094177 38100277 - H2-T10 protein_coding retained_intron MGP_NODShiLtJ_T0047252.1 MGP_NODShiLtJ_G0023488.1 mouse_genomes_project 17 38095384 38100834 - MGP_NODShiLtJ_P0047252 H2-T10 protein_coding protein_coding MGP_NODShiLtJ_T0047253.1 MGP_NODShiLtJ_G0023488.1 mouse_genomes_project 17 38095386 38100891 - MGP_NODShiLtJ_P0047253 H2-T10 protein_coding protein_coding MGP_NODShiLtJ_T0046377.1 MGP_NODShiLtJ_G0023299.1 mouse_genomes_project 17 32433753 32437242 - MGP_NODShiLtJ_P0046377 Tff2 protein_coding protein_coding MGP_NODShiLtJ_T0006880.1 MGP_NODShiLtJ_G0005658.1 mouse_genomes_project 17 36019826 36033785 - Gm20513 lincRNA lincRNA MGP_NODShiLtJ_T0098986.1 MGP_NODShiLtJ_G0037380.1 mouse_genomes_project 17 13211639 13211703 - Gm23352 snRNA snRNA MGP_NODShiLtJ_T0045510.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24266230 24284364 + MGP_NODShiLtJ_P0045510 Srrm2 protein_coding protein_coding MGP_NODShiLtJ_T0045511.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24279047 24302773 + MGP_NODShiLtJ_P0045511 Srrm2 protein_coding protein_coding MGP_NODShiLtJ_T0045512.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24279081 24302778 + MGP_NODShiLtJ_P0045512 Srrm2 protein_coding protein_coding MGP_NODShiLtJ_T0045513.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24283765 24286420 + MGP_NODShiLtJ_P0045513 Srrm2 protein_coding protein_coding MGP_NODShiLtJ_T0045514.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24283945 24284556 + Srrm2 protein_coding retained_intron MGP_NODShiLtJ_T0045515.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24288291 24289219 + MGP_NODShiLtJ_P0045515 Srrm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045516.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24288519 24293130 + Srrm2 protein_coding retained_intron MGP_NODShiLtJ_T0045517.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24295945 24299166 + Srrm2 protein_coding processed_transcript MGP_NODShiLtJ_T0045518.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24298024 24299298 + MGP_NODShiLtJ_P0045518 Srrm2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045519.1 MGP_NODShiLtJ_G0023091.1 mouse_genomes_project 17 24300158 24300961 + Srrm2 protein_coding retained_intron MGP_NODShiLtJ_T0101735.1 MGP_NODShiLtJ_G0023494.1 mouse_genomes_project 17 38175937 38389467 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017418.1 MGP_NODShiLtJ_G0015212.1 mouse_genomes_project 17 26600043 26616536 + Gm16278 processed_transcript processed_transcript MGP_NODShiLtJ_T0047556.1 MGP_NODShiLtJ_G0023622.1 mouse_genomes_project 17 50020009 50034681 + MGP_NODShiLtJ_P0047556 Mrpl14 protein_coding protein_coding MGP_NODShiLtJ_T0047557.1 MGP_NODShiLtJ_G0023622.1 mouse_genomes_project 17 50020044 50034364 + Mrpl14 protein_coding processed_transcript MGP_NODShiLtJ_T0047558.1 MGP_NODShiLtJ_G0023622.1 mouse_genomes_project 17 50030132 50034586 + Mrpl14 protein_coding processed_transcript MGP_NODShiLtJ_T0101717.1 MGP_NODShiLtJ_G0039886.1 mouse_genomes_project 17 35585613 35586003 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000975.1 MGP_NODShiLtJ_G0000901.1 mouse_genomes_project 17 79579884 79581247 - TEC TEC MGP_NODShiLtJ_T0047110.1 MGP_NODShiLtJ_G0023466.1 mouse_genomes_project 17 37598584 37648813 + MGP_NODShiLtJ_P0047110 Sfta2 protein_coding protein_coding MGP_NODShiLtJ_T0047111.1 MGP_NODShiLtJ_G0023466.1 mouse_genomes_project 17 37598613 37648811 + Sfta2 protein_coding processed_transcript MGP_NODShiLtJ_T0047114.1 MGP_NODShiLtJ_G0023466.1 mouse_genomes_project 17 37647953 37648817 + MGP_NODShiLtJ_P0047114 Sfta2 protein_coding protein_coding MGP_NODShiLtJ_T0099018.1 MGP_NODShiLtJ_G0037412.1 mouse_genomes_project 17 96995085 96995195 - Gm22235 snRNA snRNA MGP_NODShiLtJ_T0047027.1 MGP_NODShiLtJ_G0023442.1 mouse_genomes_project 17 37044567 37047896 + MGP_NODShiLtJ_P0047027 Gpank1 protein_coding protein_coding MGP_NODShiLtJ_T0047028.1 MGP_NODShiLtJ_G0023442.1 mouse_genomes_project 17 37044745 37045428 + Gpank1 protein_coding processed_transcript MGP_NODShiLtJ_T0047029.1 MGP_NODShiLtJ_G0023442.1 mouse_genomes_project 17 37046036 37047888 + MGP_NODShiLtJ_P0047029 Gpank1 protein_coding protein_coding MGP_NODShiLtJ_T0101757.1 MGP_NODShiLtJ_G0039925.1 mouse_genomes_project 17 39475819 39477010 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047107.1 MGP_NODShiLtJ_G0023464.1 mouse_genomes_project 17 37544628 37549674 + MGP_NODShiLtJ_P0047107 Cdsn protein_coding protein_coding MGP_NODShiLtJ_T0101685.1 MGP_NODShiLtJ_G0039854.1 mouse_genomes_project 17 17534277 18778478 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045320.1 MGP_NODShiLtJ_G0022998.1 mouse_genomes_project 17 13831473 13869325 + MGP_NODShiLtJ_P0045320 Fam120b protein_coding protein_coding MGP_NODShiLtJ_T0047227.1 MGP_NODShiLtJ_G0023483.1 mouse_genomes_project 17 37997096 38009976 - MGP_NODShiLtJ_P0047227 Abcf1 protein_coding protein_coding MGP_NODShiLtJ_T0047228.1 MGP_NODShiLtJ_G0023483.1 mouse_genomes_project 17 37997564 37998764 - Abcf1 protein_coding retained_intron MGP_NODShiLtJ_T0047229.1 MGP_NODShiLtJ_G0023483.1 mouse_genomes_project 17 37997578 37998466 - Abcf1 protein_coding retained_intron MGP_NODShiLtJ_T0047230.1 MGP_NODShiLtJ_G0023483.1 mouse_genomes_project 17 37998348 37999744 - Abcf1 protein_coding retained_intron MGP_NODShiLtJ_T0047231.1 MGP_NODShiLtJ_G0023483.1 mouse_genomes_project 17 37998947 37999892 - Abcf1 protein_coding retained_intron MGP_NODShiLtJ_T0047232.1 MGP_NODShiLtJ_G0023483.1 mouse_genomes_project 17 38001978 38004454 - Abcf1 protein_coding retained_intron MGP_NODShiLtJ_T0047233.1 MGP_NODShiLtJ_G0023483.1 mouse_genomes_project 17 38003910 38009574 - MGP_NODShiLtJ_P0047233 Abcf1 protein_coding protein_coding MGP_NODShiLtJ_T0047234.1 MGP_NODShiLtJ_G0023483.1 mouse_genomes_project 17 38004435 38009976 - MGP_NODShiLtJ_P0047234 Abcf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048019.1 MGP_NODShiLtJ_G0023769.1 mouse_genomes_project 17 62858712 62866649 - MGP_NODShiLtJ_P0048019 Gtf2f1 protein_coding protein_coding MGP_NODShiLtJ_T0047420.1 MGP_NODShiLtJ_G0023571.1 mouse_genomes_project 17 42109004 42114571 + MGP_NODShiLtJ_P0047420 Esp24 protein_coding protein_coding MGP_NODShiLtJ_T0003702.1 MGP_NODShiLtJ_G0003328.1 mouse_genomes_project 17 37879601 37885553 - Ppp1r18os antisense antisense MGP_NODShiLtJ_T0047066.1 MGP_NODShiLtJ_G0023450.1 mouse_genomes_project 17 37134688 37137315 - MGP_NODShiLtJ_P0047066 Tnf protein_coding protein_coding MGP_NODShiLtJ_T0047067.1 MGP_NODShiLtJ_G0023450.1 mouse_genomes_project 17 37134814 37137312 - MGP_NODShiLtJ_P0047067 Tnf protein_coding protein_coding MGP_NODShiLtJ_T0048420.1 MGP_NODShiLtJ_G0023914.1 mouse_genomes_project 17 97047173 97132746 + MGP_NODShiLtJ_P0048420 Epas1 protein_coding protein_coding MGP_NODShiLtJ_T0045681.1 MGP_NODShiLtJ_G0023137.1 mouse_genomes_project 17 25331128 25332909 + MGP_NODShiLtJ_P0045681 Rps2 protein_coding protein_coding MGP_NODShiLtJ_T0045682.1 MGP_NODShiLtJ_G0023137.1 mouse_genomes_project 17 25332428 25332905 + Rps2 protein_coding retained_intron MGP_NODShiLtJ_T0046425.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32979825 33012052 - MGP_NODShiLtJ_P0046425 Cbs protein_coding protein_coding MGP_NODShiLtJ_T0046426.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32979842 33012018 - MGP_NODShiLtJ_P0046426 Cbs protein_coding protein_coding MGP_NODShiLtJ_T0046427.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32979843 33012018 - MGP_NODShiLtJ_P0046427 Cbs protein_coding protein_coding MGP_NODShiLtJ_T0046428.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32984367 32985076 - Cbs protein_coding retained_intron MGP_NODShiLtJ_T0046429.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32991456 32996655 - Cbs protein_coding processed_transcript MGP_NODShiLtJ_T0046430.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32991981 32993567 - Cbs protein_coding processed_transcript MGP_NODShiLtJ_T0046431.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32995585 33011643 - MGP_NODShiLtJ_P0046431 Cbs protein_coding protein_coding MGP_NODShiLtJ_T0046432.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32995639 33011502 - MGP_NODShiLtJ_P0046432 Cbs protein_coding protein_coding MGP_NODShiLtJ_T0046433.1 MGP_NODShiLtJ_G0023309.1 mouse_genomes_project 17 32997997 33011502 - MGP_NODShiLtJ_P0046433 Cbs protein_coding protein_coding MGP_NODShiLtJ_T0047867.1 MGP_NODShiLtJ_G0023707.1 mouse_genomes_project 17 55630779 55980794 - MGP_NODShiLtJ_P0047867 Tbc1d5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047868.1 MGP_NODShiLtJ_G0023707.1 mouse_genomes_project 17 55630785 56224823 - MGP_NODShiLtJ_P0047868 Tbc1d5 protein_coding protein_coding MGP_NODShiLtJ_T0047078.1 MGP_NODShiLtJ_G0023455.1 mouse_genomes_project 17 37177989 37189908 + MGP_NODShiLtJ_P0047078 Ddx39b protein_coding protein_coding MGP_NODShiLtJ_T0047079.1 MGP_NODShiLtJ_G0023455.1 mouse_genomes_project 17 37177997 37187420 + MGP_NODShiLtJ_P0047079 Ddx39b protein_coding protein_coding MGP_NODShiLtJ_T0047080.1 MGP_NODShiLtJ_G0023455.1 mouse_genomes_project 17 37178048 37186114 + Ddx39b protein_coding retained_intron MGP_NODShiLtJ_T0047081.1 MGP_NODShiLtJ_G0023455.1 mouse_genomes_project 17 37178113 37189881 + MGP_NODShiLtJ_P0047081 Ddx39b protein_coding protein_coding MGP_NODShiLtJ_T0047082.1 MGP_NODShiLtJ_G0023455.1 mouse_genomes_project 17 37178239 37179468 + Ddx39b protein_coding processed_transcript MGP_NODShiLtJ_T0047083.1 MGP_NODShiLtJ_G0023455.1 mouse_genomes_project 17 37178910 37189877 + MGP_NODShiLtJ_P0047083 Ddx39b protein_coding protein_coding MGP_NODShiLtJ_T0046770.1 MGP_NODShiLtJ_G0023389.1 mouse_genomes_project 17 35980746 35986086 + MGP_NODShiLtJ_P0046770 H2-Ab1 protein_coding protein_coding MGP_NODShiLtJ_T0046771.1 MGP_NODShiLtJ_G0023389.1 mouse_genomes_project 17 35983799 35984733 + H2-Ab1 protein_coding retained_intron MGP_NODShiLtJ_T0046772.1 MGP_NODShiLtJ_G0023389.1 mouse_genomes_project 17 35984933 35986062 + H2-Ab1 protein_coding retained_intron MGP_NODShiLtJ_T0046078.1 MGP_NODShiLtJ_G0023230.1 mouse_genomes_project 17 27778637 27855672 + MGP_NODShiLtJ_P0046078 Ggnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0046079.1 MGP_NODShiLtJ_G0023230.1 mouse_genomes_project 17 27830919 27843091 + Ggnbp1 protein_coding retained_intron MGP_NODShiLtJ_T0046080.1 MGP_NODShiLtJ_G0023230.1 mouse_genomes_project 17 27830930 27855672 + MGP_NODShiLtJ_P0046080 Ggnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0046081.1 MGP_NODShiLtJ_G0023230.1 mouse_genomes_project 17 27830946 27837528 + Ggnbp1 protein_coding processed_transcript MGP_NODShiLtJ_T0046086.1 MGP_NODShiLtJ_G0023230.1 mouse_genomes_project 17 27846755 27855672 + MGP_NODShiLtJ_P0046086 Ggnbp1 protein_coding protein_coding MGP_NODShiLtJ_T0046087.1 MGP_NODShiLtJ_G0023230.1 mouse_genomes_project 17 27847873 27854101 + Ggnbp1 protein_coding retained_intron MGP_NODShiLtJ_T0003670.1 MGP_NODShiLtJ_G0003304.1 mouse_genomes_project 17 25330550 25330984 - Snhg9 antisense antisense MGP_NODShiLtJ_T0047441.1 MGP_NODShiLtJ_G0023588.1 mouse_genomes_project 17 44585394 44599931 - MGP_NODShiLtJ_P0047441 Cenpq protein_coding protein_coding MGP_NODShiLtJ_T0047442.1 MGP_NODShiLtJ_G0023588.1 mouse_genomes_project 17 44590666 44592088 - Cenpq protein_coding processed_transcript MGP_NODShiLtJ_T0047389.1 MGP_NODShiLtJ_G0023544.1 mouse_genomes_project 17 39991737 39992732 - MGP_NODShiLtJ_P0047389 Olfr113 protein_coding protein_coding MGP_NODShiLtJ_T0013136.1 MGP_NODShiLtJ_G0011244.1 mouse_genomes_project 17 40499332 40499704 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045659.1 MGP_NODShiLtJ_G0023129.1 mouse_genomes_project 17 25238628 25250775 - MGP_NODShiLtJ_P0045659 Slc9a3r2 protein_coding protein_coding MGP_NODShiLtJ_T0045660.1 MGP_NODShiLtJ_G0023129.1 mouse_genomes_project 17 25238628 25245458 - MGP_NODShiLtJ_P0045660 Slc9a3r2 protein_coding protein_coding MGP_NODShiLtJ_T0046357.1 MGP_NODShiLtJ_G0023290.1 mouse_genomes_project 17 31006931 31068228 - MGP_NODShiLtJ_P0046357 Mdga1 protein_coding protein_coding MGP_NODShiLtJ_T0046358.1 MGP_NODShiLtJ_G0023290.1 mouse_genomes_project 17 31006933 31067480 - MGP_NODShiLtJ_P0046358 Mdga1 protein_coding protein_coding MGP_NODShiLtJ_T0046359.1 MGP_NODShiLtJ_G0023290.1 mouse_genomes_project 17 31011021 31021165 - Mdga1 protein_coding retained_intron MGP_NODShiLtJ_T0046360.1 MGP_NODShiLtJ_G0023290.1 mouse_genomes_project 17 31011231 31014322 - Mdga1 protein_coding processed_transcript MGP_NODShiLtJ_T0046361.1 MGP_NODShiLtJ_G0023290.1 mouse_genomes_project 17 31011248 31018870 - MGP_NODShiLtJ_P0046361 Mdga1 protein_coding protein_coding MGP_NODShiLtJ_T0046362.1 MGP_NODShiLtJ_G0023290.1 mouse_genomes_project 17 31020862 31159446 - MGP_NODShiLtJ_P0046362 Mdga1 protein_coding protein_coding MGP_NODShiLtJ_T0046363.1 MGP_NODShiLtJ_G0023290.1 mouse_genomes_project 17 31028387 31067080 - MGP_NODShiLtJ_P0046363 Mdga1 protein_coding protein_coding MGP_NODShiLtJ_T0046364.1 MGP_NODShiLtJ_G0023290.1 mouse_genomes_project 17 31029263 31069524 - Mdga1 protein_coding processed_transcript MGP_NODShiLtJ_T0047693.1 MGP_NODShiLtJ_G0023660.1 mouse_genomes_project 17 51389146 51390341 - MGP_NODShiLtJ_P0047693 A330017A19Rik protein_coding protein_coding MGP_NODShiLtJ_T0101722.1 MGP_NODShiLtJ_G0039891.1 mouse_genomes_project 17 36254677 36255033 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047179.1 MGP_NODShiLtJ_G0023478.1 mouse_genomes_project 17 37910668 37924174 + MGP_NODShiLtJ_P0047179 Dhx16 protein_coding protein_coding MGP_NODShiLtJ_T0047180.1 MGP_NODShiLtJ_G0023478.1 mouse_genomes_project 17 37910674 37924128 + MGP_NODShiLtJ_P0047180 Dhx16 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047181.1 MGP_NODShiLtJ_G0023478.1 mouse_genomes_project 17 37919503 37921368 + Dhx16 protein_coding retained_intron MGP_NODShiLtJ_T0047182.1 MGP_NODShiLtJ_G0023478.1 mouse_genomes_project 17 37919709 37920427 + Dhx16 protein_coding retained_intron MGP_NODShiLtJ_T0047183.1 MGP_NODShiLtJ_G0023478.1 mouse_genomes_project 17 37919715 37920515 + Dhx16 protein_coding retained_intron MGP_NODShiLtJ_T0047184.1 MGP_NODShiLtJ_G0023478.1 mouse_genomes_project 17 37919799 37921266 + Dhx16 protein_coding retained_intron MGP_NODShiLtJ_T0047185.1 MGP_NODShiLtJ_G0023478.1 mouse_genomes_project 17 37921054 37924170 + MGP_NODShiLtJ_P0047185 Dhx16 protein_coding protein_coding MGP_NODShiLtJ_T0047186.1 MGP_NODShiLtJ_G0023478.1 mouse_genomes_project 17 37922286 37924056 + Dhx16 protein_coding retained_intron MGP_NODShiLtJ_T0045667.1 MGP_NODShiLtJ_G0023135.1 mouse_genomes_project 17 25306147 25317091 - MGP_NODShiLtJ_P0045667 Tbl3 protein_coding protein_coding MGP_NODShiLtJ_T0045676.1 MGP_NODShiLtJ_G0023135.1 mouse_genomes_project 17 25308661 25317062 - Tbl3 protein_coding retained_intron MGP_NODShiLtJ_T0045677.1 MGP_NODShiLtJ_G0023135.1 mouse_genomes_project 17 25309090 25310712 - MGP_NODShiLtJ_P0045677 Tbl3 protein_coding protein_coding MGP_NODShiLtJ_T0045678.1 MGP_NODShiLtJ_G0023135.1 mouse_genomes_project 17 25310222 25311545 - Tbl3 protein_coding retained_intron MGP_NODShiLtJ_T0045679.1 MGP_NODShiLtJ_G0023135.1 mouse_genomes_project 17 25314051 25315255 - Tbl3 protein_coding retained_intron MGP_NODShiLtJ_T0047559.1 MGP_NODShiLtJ_G0023623.1 mouse_genomes_project 17 50069814 50070795 - MGP_NODShiLtJ_P0047559 1600014C23Rik protein_coding protein_coding MGP_NODShiLtJ_T0100263.1 MGP_NODShiLtJ_G0038657.1 mouse_genomes_project 17 72498809 72498941 - Gm25344 snoRNA snoRNA MGP_NODShiLtJ_T0045261.1 MGP_NODShiLtJ_G0022980.1 mouse_genomes_project 17 11014539 11073766 - MGP_NODShiLtJ_P0045261 Acat3 protein_coding protein_coding MGP_NODShiLtJ_T0045262.1 MGP_NODShiLtJ_G0022980.1 mouse_genomes_project 17 11014748 11073719 - MGP_NODShiLtJ_P0045262 Acat3 protein_coding protein_coding MGP_NODShiLtJ_T0100252.1 MGP_NODShiLtJ_G0038646.1 mouse_genomes_project 17 36852677 36852743 - Snord52 snoRNA snoRNA MGP_NODShiLtJ_T0048101.1 MGP_NODShiLtJ_G0023804.1 mouse_genomes_project 17 73627473 73751325 - MGP_NODShiLtJ_P0048101 Ankrd12 protein_coding protein_coding MGP_NODShiLtJ_T0048102.1 MGP_NODShiLtJ_G0023804.1 mouse_genomes_project 17 73627985 73632363 - Ankrd12 protein_coding processed_transcript MGP_NODShiLtJ_T0048103.1 MGP_NODShiLtJ_G0023804.1 mouse_genomes_project 17 73636548 73643456 - Ankrd12 protein_coding processed_transcript MGP_NODShiLtJ_T0048104.1 MGP_NODShiLtJ_G0023804.1 mouse_genomes_project 17 73647546 73751301 - MGP_NODShiLtJ_P0048104 Ankrd12 protein_coding protein_coding MGP_NODShiLtJ_T0048105.1 MGP_NODShiLtJ_G0023804.1 mouse_genomes_project 17 73689576 73751323 - Ankrd12 protein_coding retained_intron MGP_NODShiLtJ_T0048106.1 MGP_NODShiLtJ_G0023804.1 mouse_genomes_project 17 73708668 73751368 - Ankrd12 protein_coding retained_intron MGP_NODShiLtJ_T0048107.1 MGP_NODShiLtJ_G0023804.1 mouse_genomes_project 17 73709009 73751318 - Ankrd12 protein_coding retained_intron MGP_NODShiLtJ_T0048108.1 MGP_NODShiLtJ_G0023804.1 mouse_genomes_project 17 73722884 73723739 - Ankrd12 protein_coding processed_transcript MGP_NODShiLtJ_T0046498.1 MGP_NODShiLtJ_G0023326.1 mouse_genomes_project 17 34083615 34110735 + MGP_NODShiLtJ_P0046498 Cyp4f37 protein_coding protein_coding MGP_NODShiLtJ_T0006855.1 MGP_NODShiLtJ_G0005638.1 mouse_genomes_project 17 27628682 27667204 + Gm20468 lincRNA lincRNA MGP_NODShiLtJ_T0047753.1 MGP_NODShiLtJ_G0023679.1 mouse_genomes_project 17 52264431 52274926 + MGP_NODShiLtJ_P0047753 Frs3 protein_coding protein_coding MGP_NODShiLtJ_T0047756.1 MGP_NODShiLtJ_G0023679.1 mouse_genomes_project 17 52270602 52279663 + MGP_NODShiLtJ_P0047756 Frs3 protein_coding protein_coding MGP_NODShiLtJ_T0047757.1 MGP_NODShiLtJ_G0023679.1 mouse_genomes_project 17 52270629 52273074 + Frs3 protein_coding processed_transcript MGP_NODShiLtJ_T0047758.1 MGP_NODShiLtJ_G0023679.1 mouse_genomes_project 17 52274933 52276250 + Frs3 protein_coding processed_transcript MGP_NODShiLtJ_T0047759.1 MGP_NODShiLtJ_G0023679.1 mouse_genomes_project 17 52277439 52279661 + Frs3 protein_coding processed_transcript MGP_NODShiLtJ_T0101724.1 MGP_NODShiLtJ_G0039893.1 mouse_genomes_project 17 36323193 36323348 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045144.1 MGP_NODShiLtJ_G0022941.1 mouse_genomes_project 17 3788451 3796184 + MGP_NODShiLtJ_P0045144 protein_coding protein_coding MGP_NODShiLtJ_T0045146.1 MGP_NODShiLtJ_G0022941.1 mouse_genomes_project 17 3791316 3794198 + protein_coding retained_intron MGP_NODShiLtJ_T0048388.1 MGP_NODShiLtJ_G0023902.1 mouse_genomes_project 17 94783351 94809285 - MGP_NODShiLtJ_P0048388 Abcg5 protein_coding protein_coding MGP_NODShiLtJ_T0048389.1 MGP_NODShiLtJ_G0023902.1 mouse_genomes_project 17 94783605 94808467 - MGP_NODShiLtJ_P0048389 Abcg5 protein_coding protein_coding MGP_NODShiLtJ_T0048390.1 MGP_NODShiLtJ_G0023902.1 mouse_genomes_project 17 94796203 94800638 - Abcg5 protein_coding processed_transcript MGP_NODShiLtJ_T0048391.1 MGP_NODShiLtJ_G0023902.1 mouse_genomes_project 17 94796681 94802745 - Abcg5 protein_coding retained_intron MGP_NODShiLtJ_T0048180.1 MGP_NODShiLtJ_G0023823.1 mouse_genomes_project 17 79128317 79145320 - MGP_NODShiLtJ_P0048180 Myl12b protein_coding protein_coding MGP_NODShiLtJ_T0048181.1 MGP_NODShiLtJ_G0023823.1 mouse_genomes_project 17 79128668 79130364 - Myl12b protein_coding retained_intron MGP_NODShiLtJ_T0048182.1 MGP_NODShiLtJ_G0023823.1 mouse_genomes_project 17 79131328 79145063 - Myl12b protein_coding retained_intron MGP_NODShiLtJ_T0006907.1 MGP_NODShiLtJ_G0005676.1 mouse_genomes_project 17 59756514 59778937 - 1700025K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0045840.1 MGP_NODShiLtJ_G0023175.1 mouse_genomes_project 17 26147024 26154441 - MGP_NODShiLtJ_P0045840 Sstr5 protein_coding protein_coding MGP_NODShiLtJ_T0045841.1 MGP_NODShiLtJ_G0023175.1 mouse_genomes_project 17 26147024 26154441 - MGP_NODShiLtJ_P0045841 Sstr5 protein_coding protein_coding MGP_NODShiLtJ_T0047940.1 MGP_NODShiLtJ_G0023737.1 mouse_genomes_project 17 61905441 61922705 - MGP_NODShiLtJ_P0047940 Sema6b protein_coding protein_coding MGP_NODShiLtJ_T0047941.1 MGP_NODShiLtJ_G0023737.1 mouse_genomes_project 17 61905441 61916208 - MGP_NODShiLtJ_P0047941 Sema6b protein_coding protein_coding MGP_NODShiLtJ_T0045921.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26519191 26535790 - Wdr90 protein_coding retained_intron MGP_NODShiLtJ_T0045922.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26519191 26535882 - MGP_NODShiLtJ_P0045922 Wdr90 protein_coding protein_coding MGP_NODShiLtJ_T0045923.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26519193 26535875 - Wdr90 protein_coding retained_intron MGP_NODShiLtJ_T0045924.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26519488 26535908 - MGP_NODShiLtJ_P0045924 Wdr90 protein_coding protein_coding MGP_NODShiLtJ_T0045925.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26519808 26520915 - Wdr90 protein_coding retained_intron MGP_NODShiLtJ_T0045926.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26522989 26526181 - Wdr90 protein_coding retained_intron MGP_NODShiLtJ_T0045927.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26524373 26526288 - Wdr90 protein_coding retained_intron MGP_NODShiLtJ_T0045928.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26526331 26528311 - Wdr90 protein_coding retained_intron MGP_NODShiLtJ_T0045929.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26527755 26535882 - Wdr90 protein_coding retained_intron MGP_NODShiLtJ_T0045930.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26528245 26529715 - Wdr90 protein_coding retained_intron MGP_NODShiLtJ_T0045931.1 MGP_NODShiLtJ_G0023195.1 mouse_genomes_project 17 26530199 26533633 - MGP_NODShiLtJ_P0045931 Wdr90 protein_coding protein_coding MGP_NODShiLtJ_T0101751.1 MGP_NODShiLtJ_G0039919.1 mouse_genomes_project 17 38954848 38955277 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100261.1 MGP_NODShiLtJ_G0038655.1 mouse_genomes_project 17 69783073 69783207 - Gm25800 snoRNA snoRNA MGP_NODShiLtJ_T0045758.1 MGP_NODShiLtJ_G0023155.1 mouse_genomes_project 17 25685562 25708572 - MGP_NODShiLtJ_P0045758 Tmem204 protein_coding protein_coding MGP_NODShiLtJ_T0045759.1 MGP_NODShiLtJ_G0023155.1 mouse_genomes_project 17 25685764 25705617 - MGP_NODShiLtJ_P0045759 Tmem204 protein_coding protein_coding MGP_NODShiLtJ_T0047697.1 MGP_NODShiLtJ_G0023663.1 mouse_genomes_project 17 51435458 51517896 - MGP_NODShiLtJ_P0047697 Ubr2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047698.1 MGP_NODShiLtJ_G0023663.1 mouse_genomes_project 17 51435461 51518209 - MGP_NODShiLtJ_P0047698 Ubr2 protein_coding protein_coding MGP_NODShiLtJ_T0047699.1 MGP_NODShiLtJ_G0023663.1 mouse_genomes_project 17 51435461 51518209 - MGP_NODShiLtJ_P0047699 Ubr2 protein_coding protein_coding MGP_NODShiLtJ_T0048465.1 MGP_NODShiLtJ_G0023929.1 mouse_genomes_project 17 98421048 98437355 + MGP_NODShiLtJ_P0048465 Msh6 protein_coding protein_coding MGP_NODShiLtJ_T0011327.1 MGP_NODShiLtJ_G0009460.1 mouse_genomes_project 17 95808679 95808904 + Gm27801 misc_RNA misc_RNA MGP_NODShiLtJ_T0047113.1 MGP_NODShiLtJ_G0023468.1 mouse_genomes_project 17 37633991 37641884 - MGP_NODShiLtJ_P0047113 Dpcr1 protein_coding protein_coding MGP_NODShiLtJ_T0101697.1 MGP_NODShiLtJ_G0039866.1 mouse_genomes_project 17 20234801 20235554 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045391.1 MGP_NODShiLtJ_G0023028.1 mouse_genomes_project 17 20146411 20202412 + MGP_NODShiLtJ_P0045391 Vmn2r107 protein_coding protein_coding MGP_NODShiLtJ_T0099015.1 MGP_NODShiLtJ_G0037409.1 mouse_genomes_project 17 94390090 94390197 - Gm24492 snRNA snRNA MGP_NODShiLtJ_T0045282.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12077156 12250217 + MGP_NODShiLtJ_P0045282 Mllt4 protein_coding protein_coding MGP_NODShiLtJ_T0045283.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12080496 12186285 + Mllt4 protein_coding processed_transcript MGP_NODShiLtJ_T0045284.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12134929 12222727 + MGP_NODShiLtJ_P0045284 Mllt4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045285.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12134929 12225781 + MGP_NODShiLtJ_P0045285 Mllt4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045286.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12183020 12187637 + Mllt4 protein_coding retained_intron MGP_NODShiLtJ_T0045287.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12183791 12187324 + Mllt4 protein_coding processed_transcript MGP_NODShiLtJ_T0045288.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12214260 12222620 + Mllt4 protein_coding processed_transcript MGP_NODShiLtJ_T0045289.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12222100 12222985 + Mllt4 protein_coding retained_intron MGP_NODShiLtJ_T0045290.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12247936 12253664 + Mllt4 protein_coding retained_intron MGP_NODShiLtJ_T0045291.1 MGP_NODShiLtJ_G0022987.1 mouse_genomes_project 17 12248098 12255090 + Mllt4 protein_coding retained_intron MGP_NODShiLtJ_T0048249.1 MGP_NODShiLtJ_G0023845.1 mouse_genomes_project 17 82708621 82828603 - MGP_NODShiLtJ_P0048249 Memo1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046386.1 MGP_NODShiLtJ_G0023303.1 mouse_genomes_project 17 32562896 32591106 - MGP_NODShiLtJ_P0046386 Rsph1 protein_coding protein_coding MGP_NODShiLtJ_T0047833.1 MGP_NODShiLtJ_G0023698.1 mouse_genomes_project 17 53196895 53200448 - Tspo2 protein_coding retained_intron MGP_NODShiLtJ_T0047834.1 MGP_NODShiLtJ_G0023698.1 mouse_genomes_project 17 53197368 53200478 - MGP_NODShiLtJ_P0047834 Tspo2 protein_coding protein_coding MGP_NODShiLtJ_T0047835.1 MGP_NODShiLtJ_G0023698.1 mouse_genomes_project 17 53197452 53198992 - MGP_NODShiLtJ_P0047835 Tspo2 protein_coding protein_coding MGP_NODShiLtJ_T0047836.1 MGP_NODShiLtJ_G0023698.1 mouse_genomes_project 17 53197501 53198989 - MGP_NODShiLtJ_P0047836 Tspo2 protein_coding protein_coding MGP_NODShiLtJ_T0047837.1 MGP_NODShiLtJ_G0023698.1 mouse_genomes_project 17 53198854 53200473 - Tspo2 protein_coding processed_transcript MGP_NODShiLtJ_T0047438.1 MGP_NODShiLtJ_G0023585.1 mouse_genomes_project 17 44448747 44485894 + MGP_NODShiLtJ_P0047438 Rhag protein_coding protein_coding MGP_NODShiLtJ_T0047007.1 MGP_NODShiLtJ_G0023438.1 mouse_genomes_project 17 37011183 37013748 + Abhd16a protein_coding retained_intron MGP_NODShiLtJ_T0047008.1 MGP_NODShiLtJ_G0023438.1 mouse_genomes_project 17 37011211 37024969 + MGP_NODShiLtJ_P0047008 Abhd16a protein_coding protein_coding MGP_NODShiLtJ_T0047009.1 MGP_NODShiLtJ_G0023438.1 mouse_genomes_project 17 37011234 37024938 + MGP_NODShiLtJ_P0047009 Abhd16a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047010.1 MGP_NODShiLtJ_G0023438.1 mouse_genomes_project 17 37011790 37013888 + Abhd16a protein_coding retained_intron MGP_NODShiLtJ_T0047011.1 MGP_NODShiLtJ_G0023438.1 mouse_genomes_project 17 37018333 37022922 + Abhd16a protein_coding processed_transcript MGP_NODShiLtJ_T0047012.1 MGP_NODShiLtJ_G0023438.1 mouse_genomes_project 17 37021912 37022677 + Abhd16a protein_coding retained_intron MGP_NODShiLtJ_T0047013.1 MGP_NODShiLtJ_G0023438.1 mouse_genomes_project 17 37022835 37024012 + Abhd16a protein_coding retained_intron MGP_NODShiLtJ_T0047425.1 MGP_NODShiLtJ_G0023576.1 mouse_genomes_project 17 43771862 43823790 - MGP_NODShiLtJ_P0047425 Crisp1 protein_coding protein_coding MGP_NODShiLtJ_T0045236.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10909288 10943579 - MGP_NODShiLtJ_P0045236 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0045237.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10909324 10923583 - MGP_NODShiLtJ_P0045237 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0045238.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10909324 10923463 - MGP_NODShiLtJ_P0045238 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0045239.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10909324 10923583 - MGP_NODShiLtJ_P0045239 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0045240.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10909324 10917472 - MGP_NODShiLtJ_P0045240 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0045241.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10910413 10921038 - MGP_NODShiLtJ_P0045241 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0045242.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10910516 10921024 - MGP_NODShiLtJ_P0045242 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0045243.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10910527 10921038 - MGP_NODShiLtJ_P0045243 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0045244.1 MGP_NODShiLtJ_G0022975.1 mouse_genomes_project 17 10910670 10925376 - MGP_NODShiLtJ_P0045244 Mas1 protein_coding protein_coding MGP_NODShiLtJ_T0046387.1 MGP_NODShiLtJ_G0023304.1 mouse_genomes_project 17 32613329 32677561 + MGP_NODShiLtJ_P0046387 Slc37a1 protein_coding protein_coding MGP_NODShiLtJ_T0046388.1 MGP_NODShiLtJ_G0023304.1 mouse_genomes_project 17 32614065 32677561 + MGP_NODShiLtJ_P0046388 Slc37a1 protein_coding protein_coding MGP_NODShiLtJ_T0046389.1 MGP_NODShiLtJ_G0023304.1 mouse_genomes_project 17 32614196 32675712 + MGP_NODShiLtJ_P0046389 Slc37a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101696.1 MGP_NODShiLtJ_G0039865.1 mouse_genomes_project 17 20125513 20132694 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013175.1 MGP_NODShiLtJ_G0011283.1 mouse_genomes_project 17 88318357 88319521 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046331.1 MGP_NODShiLtJ_G0023285.1 mouse_genomes_project 17 30702665 30760999 + MGP_NODShiLtJ_P0046331 Tbc1d22b protein_coding protein_coding MGP_NODShiLtJ_T0046332.1 MGP_NODShiLtJ_G0023285.1 mouse_genomes_project 17 30725206 30760998 + Tbc1d22b protein_coding retained_intron MGP_NODShiLtJ_T0048329.1 MGP_NODShiLtJ_G0023873.1 mouse_genomes_project 17 89222420 89230498 - MGP_NODShiLtJ_P0048329 Cyp1b1 protein_coding protein_coding MGP_NODShiLtJ_T0000965.1 MGP_NODShiLtJ_G0000891.1 mouse_genomes_project 17 56847957 56852149 - TEC TEC MGP_NODShiLtJ_T0048455.1 MGP_NODShiLtJ_G0023925.1 mouse_genomes_project 17 98019289 98035882 + MGP_NODShiLtJ_P0048455 Epcam protein_coding protein_coding MGP_NODShiLtJ_T0046226.1 MGP_NODShiLtJ_G0023261.1 mouse_genomes_project 17 29567911 29571447 - MGP_NODShiLtJ_P0046226 Clps protein_coding protein_coding MGP_NODShiLtJ_T0046227.1 MGP_NODShiLtJ_G0023261.1 mouse_genomes_project 17 29567914 29571392 - MGP_NODShiLtJ_P0046227 Clps protein_coding protein_coding MGP_NODShiLtJ_T0013155.1 MGP_NODShiLtJ_G0011263.1 mouse_genomes_project 17 59197394 59197740 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046863.1 MGP_NODShiLtJ_G0023409.1 mouse_genomes_project 17 36486977 36517776 + MGP_NODShiLtJ_P0046863 Tnxb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0017410.1 MGP_NODShiLtJ_G0015210.1 mouse_genomes_project 17 24975485 24985732 - D330041H03Rik processed_transcript antisense MGP_NODShiLtJ_T0017411.1 MGP_NODShiLtJ_G0015210.1 mouse_genomes_project 17 24980372 24985816 - D330041H03Rik processed_transcript antisense MGP_NODShiLtJ_T0017412.1 MGP_NODShiLtJ_G0015210.1 mouse_genomes_project 17 24980388 24985710 - D330041H03Rik processed_transcript antisense MGP_NODShiLtJ_T0017413.1 MGP_NODShiLtJ_G0015210.1 mouse_genomes_project 17 24983091 24984935 - D330041H03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017414.1 MGP_NODShiLtJ_G0015210.1 mouse_genomes_project 17 24983099 24985982 - D330041H03Rik processed_transcript antisense MGP_NODShiLtJ_T0017415.1 MGP_NODShiLtJ_G0015210.1 mouse_genomes_project 17 24983729 24985730 - D330041H03Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017416.1 MGP_NODShiLtJ_G0015210.1 mouse_genomes_project 17 24983804 24985702 - D330041H03Rik processed_transcript antisense MGP_NODShiLtJ_T0046918.1 MGP_NODShiLtJ_G0023419.1 mouse_genomes_project 17 36772337 36795970 + MGP_NODShiLtJ_P0046918 Zbtb12 protein_coding protein_coding MGP_NODShiLtJ_T0046921.1 MGP_NODShiLtJ_G0023419.1 mouse_genomes_project 17 36792881 36797396 + MGP_NODShiLtJ_P0046921 Zbtb12 protein_coding protein_coding MGP_NODShiLtJ_T0047907.1 MGP_NODShiLtJ_G0023721.1 mouse_genomes_project 17 61469123 61590141 + MGP_NODShiLtJ_P0047907 Adgre4 protein_coding protein_coding MGP_NODShiLtJ_T0046944.1 MGP_NODShiLtJ_G0023425.1 mouse_genomes_project 17 36884543 36891065 + MGP_NODShiLtJ_P0046944 Hspa1l protein_coding protein_coding MGP_NODShiLtJ_T0048132.1 MGP_NODShiLtJ_G0023811.1 mouse_genomes_project 17 74414706 75160685 - MGP_NODShiLtJ_P0048132 Ptprm protein_coding protein_coding MGP_NODShiLtJ_T0048133.1 MGP_NODShiLtJ_G0023811.1 mouse_genomes_project 17 74532527 75160255 - MGP_NODShiLtJ_P0048133 Ptprm protein_coding unknown_likely_coding MGP_NODShiLtJ_T0017419.1 MGP_NODShiLtJ_G0015213.1 mouse_genomes_project 17 30702676 30837243 + Gm28052 processed_transcript processed_transcript MGP_NODShiLtJ_T0045371.1 MGP_NODShiLtJ_G0023011.1 mouse_genomes_project 17 16854772 16873078 + Fpr2 protein_coding processed_transcript MGP_NODShiLtJ_T0045373.1 MGP_NODShiLtJ_G0023011.1 mouse_genomes_project 17 16854836 16872979 + MGP_NODShiLtJ_P0045373 Fpr2 protein_coding protein_coding MGP_NODShiLtJ_T0006924.1 MGP_NODShiLtJ_G0005688.1 mouse_genomes_project 17 93040904 93042629 + Gm29052 lincRNA lincRNA MGP_NODShiLtJ_T0045503.1 MGP_NODShiLtJ_G0023088.1 mouse_genomes_project 17 24212175 24216816 - MGP_NODShiLtJ_P0045503 Kremen2 protein_coding protein_coding MGP_NODShiLtJ_T0045274.1 MGP_NODShiLtJ_G0022986.1 mouse_genomes_project 17 11465953 11768351 + MGP_NODShiLtJ_P0045274 Smok2a protein_coding protein_coding MGP_NODShiLtJ_T0048456.1 MGP_NODShiLtJ_G0023926.1 mouse_genomes_project 17 98060488 98131621 + MGP_NODShiLtJ_P0048456 Msh2 protein_coding protein_coding MGP_NODShiLtJ_T0048457.1 MGP_NODShiLtJ_G0023926.1 mouse_genomes_project 17 98060698 98068732 + Msh2 protein_coding retained_intron MGP_NODShiLtJ_T0048458.1 MGP_NODShiLtJ_G0023926.1 mouse_genomes_project 17 98060719 98114700 + Msh2 protein_coding retained_intron MGP_NODShiLtJ_T0048459.1 MGP_NODShiLtJ_G0023926.1 mouse_genomes_project 17 98060754 98131628 + MGP_NODShiLtJ_P0048459 Msh2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048460.1 MGP_NODShiLtJ_G0023926.1 mouse_genomes_project 17 98060767 98076091 + MGP_NODShiLtJ_P0048460 Msh2 protein_coding protein_coding MGP_NODShiLtJ_T0048461.1 MGP_NODShiLtJ_G0023926.1 mouse_genomes_project 17 98080180 98087818 + Msh2 protein_coding retained_intron MGP_NODShiLtJ_T0048462.1 MGP_NODShiLtJ_G0023926.1 mouse_genomes_project 17 98087655 98125660 + MGP_NODShiLtJ_P0048462 Msh2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0017459.1 MGP_NODShiLtJ_G0015226.1 mouse_genomes_project 17 101649407 101655364 + 4930480K15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0047369.1 MGP_NODShiLtJ_G0023528.1 mouse_genomes_project 17 39542739 39543790 + MGP_NODShiLtJ_P0047369 Olfr96 protein_coding protein_coding MGP_NODShiLtJ_T0017399.1 MGP_NODShiLtJ_G0015204.1 mouse_genomes_project 17 6074794 6128241 + T2 processed_transcript processed_transcript MGP_NODShiLtJ_T0017400.1 MGP_NODShiLtJ_G0015204.1 mouse_genomes_project 17 6100276 6128241 + T2 processed_transcript processed_transcript MGP_NODShiLtJ_T0046438.1 MGP_NODShiLtJ_G0023312.1 mouse_genomes_project 17 33236593 33248076 - MGP_NODShiLtJ_P0046438 Sik1 protein_coding protein_coding MGP_NODShiLtJ_T0046294.1 MGP_NODShiLtJ_G0023276.1 mouse_genomes_project 17 30263194 30352128 - MGP_NODShiLtJ_P0046294 Cpne5 protein_coding protein_coding MGP_NODShiLtJ_T0046295.1 MGP_NODShiLtJ_G0023276.1 mouse_genomes_project 17 30264560 30291887 - Cpne5 protein_coding processed_transcript MGP_NODShiLtJ_T0046296.1 MGP_NODShiLtJ_G0023276.1 mouse_genomes_project 17 30265666 30352038 - MGP_NODShiLtJ_P0046296 Cpne5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046297.1 MGP_NODShiLtJ_G0023276.1 mouse_genomes_project 17 30276305 30284461 - Cpne5 protein_coding processed_transcript MGP_NODShiLtJ_T0046298.1 MGP_NODShiLtJ_G0023276.1 mouse_genomes_project 17 30296108 30352090 - MGP_NODShiLtJ_P0046298 Cpne5 protein_coding protein_coding MGP_NODShiLtJ_T0046299.1 MGP_NODShiLtJ_G0023276.1 mouse_genomes_project 17 30331089 30352043 - Cpne5 protein_coding retained_intron MGP_NODShiLtJ_T0045153.1 MGP_NODShiLtJ_G0022948.1 mouse_genomes_project 17 4812685 4950040 + MGP_NODShiLtJ_P0045153 Rps6ka2 protein_coding protein_coding MGP_NODShiLtJ_T0047407.1 MGP_NODShiLtJ_G0023562.1 mouse_genomes_project 17 40656769 40661310 - MGP_NODShiLtJ_P0047407 Olfr131 protein_coding protein_coding MGP_NODShiLtJ_T0047408.1 MGP_NODShiLtJ_G0023562.1 mouse_genomes_project 17 40656769 40657799 - MGP_NODShiLtJ_P0047408 Olfr131 protein_coding protein_coding MGP_NODShiLtJ_T0003667.1 MGP_NODShiLtJ_G0003302.1 mouse_genomes_project 17 24333760 24339207 - Gm15947 antisense antisense MGP_NODShiLtJ_T0045589.1 MGP_NODShiLtJ_G0023112.1 mouse_genomes_project 17 24762806 24768544 - MGP_NODShiLtJ_P0045589 1600002H07Rik protein_coding protein_coding MGP_NODShiLtJ_T0045590.1 MGP_NODShiLtJ_G0023112.1 mouse_genomes_project 17 24762991 24768605 - 1600002H07Rik protein_coding retained_intron MGP_NODShiLtJ_T0045591.1 MGP_NODShiLtJ_G0023112.1 mouse_genomes_project 17 24763298 24768446 - MGP_NODShiLtJ_P0045591 1600002H07Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045592.1 MGP_NODShiLtJ_G0023112.1 mouse_genomes_project 17 24766932 24768485 - 1600002H07Rik protein_coding retained_intron MGP_NODShiLtJ_T0045593.1 MGP_NODShiLtJ_G0023112.1 mouse_genomes_project 17 24767534 24768507 - 1600002H07Rik protein_coding retained_intron MGP_NODShiLtJ_T0101725.1 MGP_NODShiLtJ_G0039894.1 mouse_genomes_project 17 36332328 36353713 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048206.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79535126 79547579 - Smchd1 protein_coding processed_transcript MGP_NODShiLtJ_T0048207.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79535126 79669686 - MGP_NODShiLtJ_P0048207 Smchd1 protein_coding protein_coding MGP_NODShiLtJ_T0048208.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79537497 79539992 - Smchd1 protein_coding retained_intron MGP_NODShiLtJ_T0048209.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79539905 79553012 - Smchd1 protein_coding retained_intron MGP_NODShiLtJ_T0048210.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79541896 79544414 - Smchd1 protein_coding retained_intron MGP_NODShiLtJ_T0048211.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79548162 79552314 - Smchd1 protein_coding retained_intron MGP_NODShiLtJ_T0048212.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79578527 79579774 - Smchd1 protein_coding retained_intron MGP_NODShiLtJ_T0048213.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79581866 79582681 - Smchd1 protein_coding retained_intron MGP_NODShiLtJ_T0048217.1 MGP_NODShiLtJ_G0023828.1 mouse_genomes_project 17 79666873 79669671 - Smchd1 protein_coding retained_intron MGP_NODShiLtJ_T0048421.1 MGP_NODShiLtJ_G0023915.1 mouse_genomes_project 17 97226524 97231530 + MGP_NODShiLtJ_P0048421 Tmem247 protein_coding protein_coding MGP_NODShiLtJ_T0048422.1 MGP_NODShiLtJ_G0023915.1 mouse_genomes_project 17 97227573 97231537 + MGP_NODShiLtJ_P0048422 Tmem247 protein_coding protein_coding MGP_NODShiLtJ_T0048073.1 MGP_NODShiLtJ_G0023794.1 mouse_genomes_project 17 71784254 71840720 - MGP_NODShiLtJ_P0048073 Pja2 protein_coding protein_coding MGP_NODShiLtJ_T0048074.1 MGP_NODShiLtJ_G0023794.1 mouse_genomes_project 17 71784255 71821455 - MGP_NODShiLtJ_P0048074 Pja2 protein_coding protein_coding MGP_NODShiLtJ_T0048075.1 MGP_NODShiLtJ_G0023794.1 mouse_genomes_project 17 71784255 71821455 - MGP_NODShiLtJ_P0048075 Pja2 protein_coding protein_coding MGP_NODShiLtJ_T0048076.1 MGP_NODShiLtJ_G0023794.1 mouse_genomes_project 17 71784269 71840669 - MGP_NODShiLtJ_P0048076 Pja2 protein_coding protein_coding MGP_NODShiLtJ_T0045321.1 MGP_NODShiLtJ_G0022999.1 mouse_genomes_project 17 13919557 13939512 - MGP_NODShiLtJ_P0045321 Psmb1 protein_coding protein_coding MGP_NODShiLtJ_T0010124.1 MGP_NODShiLtJ_G0008257.1 mouse_genomes_project 17 71829949 71830041 - Gm24194 miRNA miRNA MGP_NODShiLtJ_T0048411.1 MGP_NODShiLtJ_G0023910.1 mouse_genomes_project 17 95896463 95900437 - MGP_NODShiLtJ_P0048411 Six2 protein_coding protein_coding MGP_NODShiLtJ_T0048412.1 MGP_NODShiLtJ_G0023910.1 mouse_genomes_project 17 95896468 95900417 - MGP_NODShiLtJ_P0048412 Six2 protein_coding protein_coding MGP_NODShiLtJ_T0045463.1 MGP_NODShiLtJ_G0023074.1 mouse_genomes_project 17 23699336 23724543 + MGP_NODShiLtJ_P0045463 protein_coding protein_coding MGP_NODShiLtJ_T0047002.1 MGP_NODShiLtJ_G0023436.1 mouse_genomes_project 17 36998030 37000548 + MGP_NODShiLtJ_P0047002 Ly6g6e protein_coding protein_coding MGP_NODShiLtJ_T0047003.1 MGP_NODShiLtJ_G0023436.1 mouse_genomes_project 17 36998059 37000804 + MGP_NODShiLtJ_P0047003 Ly6g6e protein_coding protein_coding MGP_NODShiLtJ_T0047004.1 MGP_NODShiLtJ_G0023436.1 mouse_genomes_project 17 36998065 37001058 + MGP_NODShiLtJ_P0047004 Ly6g6e protein_coding protein_coding MGP_NODShiLtJ_T0047005.1 MGP_NODShiLtJ_G0023436.1 mouse_genomes_project 17 36998283 37000539 + MGP_NODShiLtJ_P0047005 Ly6g6e protein_coding protein_coding MGP_NODShiLtJ_T0013164.1 MGP_NODShiLtJ_G0011272.1 mouse_genomes_project 17 74126925 74127473 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098184.1 MGP_NODShiLtJ_G0036596.1 mouse_genomes_project 17 4640748 4640836 - Gm22416 scaRNA scaRNA MGP_NODShiLtJ_T0048018.1 MGP_NODShiLtJ_G0023768.1 mouse_genomes_project 17 62852383 62852945 - MGP_NODShiLtJ_P0048018 Pspn protein_coding protein_coding MGP_NODShiLtJ_T0045987.1 MGP_NODShiLtJ_G0023210.1 mouse_genomes_project 17 26845669 26912735 + MGP_NODShiLtJ_P0045987 Axin1 protein_coding protein_coding MGP_NODShiLtJ_T0045988.1 MGP_NODShiLtJ_G0023210.1 mouse_genomes_project 17 26845809 26912165 + MGP_NODShiLtJ_P0045988 Axin1 protein_coding protein_coding MGP_NODShiLtJ_T0045989.1 MGP_NODShiLtJ_G0023210.1 mouse_genomes_project 17 26845931 26912218 + MGP_NODShiLtJ_P0045989 Axin1 protein_coding protein_coding MGP_NODShiLtJ_T0045990.1 MGP_NODShiLtJ_G0023210.1 mouse_genomes_project 17 26850328 26900479 + MGP_NODShiLtJ_P0045990 Axin1 protein_coding protein_coding MGP_NODShiLtJ_T0045991.1 MGP_NODShiLtJ_G0023210.1 mouse_genomes_project 17 26904306 26904949 + Axin1 protein_coding retained_intron MGP_NODShiLtJ_T0099019.1 MGP_NODShiLtJ_G0037413.1 mouse_genomes_project 17 98833063 98833158 - Gm22542 snRNA snRNA MGP_NODShiLtJ_T0047966.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62375179 62378732 - MGP_NODShiLtJ_P0047966 Safb2 protein_coding protein_coding MGP_NODShiLtJ_T0047967.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62375187 62378783 - MGP_NODShiLtJ_P0047967 Safb2 protein_coding protein_coding MGP_NODShiLtJ_T0047968.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62377154 62405356 - MGP_NODShiLtJ_P0047968 Safb2 protein_coding protein_coding MGP_NODShiLtJ_T0047969.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62377154 62381231 - MGP_NODShiLtJ_P0047969 Safb2 protein_coding protein_coding MGP_NODShiLtJ_T0047970.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62377154 62405283 - MGP_NODShiLtJ_P0047970 Safb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047971.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62377164 62386703 - Safb2 protein_coding processed_transcript MGP_NODShiLtJ_T0047972.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62377520 62381234 - MGP_NODShiLtJ_P0047972 Safb2 protein_coding protein_coding MGP_NODShiLtJ_T0047973.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62380212 62385645 - MGP_NODShiLtJ_P0047973 Safb2 protein_coding protein_coding MGP_NODShiLtJ_T0047974.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62381748 62383649 - Safb2 protein_coding retained_intron MGP_NODShiLtJ_T0047975.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62383109 62389302 - Safb2 protein_coding retained_intron MGP_NODShiLtJ_T0047976.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62383205 62405295 - MGP_NODShiLtJ_P0047976 Safb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047977.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62384286 62389735 - Safb2 protein_coding retained_intron MGP_NODShiLtJ_T0047978.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62385232 62385884 - Safb2 protein_coding retained_intron MGP_NODShiLtJ_T0047979.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62385474 62405333 - MGP_NODShiLtJ_P0047979 Safb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047980.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62397109 62403816 - Safb2 protein_coding retained_intron MGP_NODShiLtJ_T0047981.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62397238 62405072 - Safb2 protein_coding retained_intron MGP_NODShiLtJ_T0047982.1 MGP_NODShiLtJ_G0023749.1 mouse_genomes_project 17 62399645 62405282 - Safb2 protein_coding retained_intron MGP_NODShiLtJ_T0013154.1 MGP_NODShiLtJ_G0011262.1 mouse_genomes_project 17 59073166 59073536 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046875.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36726451 36728682 + MGP_NODShiLtJ_P0046875 Dxo protein_coding protein_coding MGP_NODShiLtJ_T0046876.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36726451 36728729 + MGP_NODShiLtJ_P0046876 Dxo protein_coding protein_coding MGP_NODShiLtJ_T0046877.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36726451 36728144 + MGP_NODShiLtJ_P0046877 Dxo protein_coding protein_coding MGP_NODShiLtJ_T0046878.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36726514 36727792 + Dxo protein_coding retained_intron MGP_NODShiLtJ_T0046879.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36726680 36727410 + MGP_NODShiLtJ_P0046879 Dxo protein_coding protein_coding MGP_NODShiLtJ_T0046880.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36726831 36728633 + MGP_NODShiLtJ_P0046880 Dxo protein_coding protein_coding MGP_NODShiLtJ_T0046881.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36727089 36728634 + MGP_NODShiLtJ_P0046881 Dxo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046882.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36727425 36728179 + MGP_NODShiLtJ_P0046882 Dxo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046883.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36727727 36728633 + MGP_NODShiLtJ_P0046883 Dxo protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046884.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36727756 36728633 + MGP_NODShiLtJ_P0046884 Dxo protein_coding protein_coding MGP_NODShiLtJ_T0046885.1 MGP_NODShiLtJ_G0023413.1 mouse_genomes_project 17 36727876 36728619 + MGP_NODShiLtJ_P0046885 Dxo protein_coding protein_coding MGP_NODShiLtJ_T0010097.1 MGP_NODShiLtJ_G0008230.1 mouse_genomes_project 17 29530025 29530151 + Gm25195 miRNA miRNA MGP_NODShiLtJ_T0100272.1 MGP_NODShiLtJ_G0038666.1 mouse_genomes_project 17 97802352 97802486 - Gm26005 snoRNA snoRNA MGP_NODShiLtJ_T0100260.1 MGP_NODShiLtJ_G0038654.1 mouse_genomes_project 17 65342313 65342434 - Gm23769 snoRNA snoRNA MGP_NODShiLtJ_T0047115.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37653800 37665235 - MGP_NODShiLtJ_P0047115 Vars2 protein_coding protein_coding MGP_NODShiLtJ_T0047116.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37653821 37663909 - Vars2 protein_coding retained_intron MGP_NODShiLtJ_T0047117.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37654553 37661115 - MGP_NODShiLtJ_P0047117 Vars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047118.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37654720 37660657 - MGP_NODShiLtJ_P0047118 Vars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047119.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37654790 37656579 - Vars2 protein_coding retained_intron MGP_NODShiLtJ_T0047120.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37654906 37655681 - Vars2 protein_coding retained_intron MGP_NODShiLtJ_T0047121.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37657718 37658213 - Vars2 protein_coding retained_intron MGP_NODShiLtJ_T0047122.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37657850 37660132 - MGP_NODShiLtJ_P0047122 Vars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047123.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37658191 37659811 - Vars2 protein_coding retained_intron MGP_NODShiLtJ_T0047124.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37662075 37664380 - Vars2 protein_coding retained_intron MGP_NODShiLtJ_T0047125.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37663763 37665183 - Vars2 protein_coding retained_intron MGP_NODShiLtJ_T0047126.1 MGP_NODShiLtJ_G0023469.1 mouse_genomes_project 17 37663847 37665192 - MGP_NODShiLtJ_P0047126 Vars2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006935.1 MGP_NODShiLtJ_G0005696.1 mouse_genomes_project 17 102490517 102528553 + Gm15404 lincRNA lincRNA MGP_NODShiLtJ_T0047314.1 MGP_NODShiLtJ_G0023512.1 mouse_genomes_project 17 39206321 39211386 + MGP_NODShiLtJ_P0047314 Rnf39 protein_coding protein_coding MGP_NODShiLtJ_T0047315.1 MGP_NODShiLtJ_G0023512.1 mouse_genomes_project 17 39206458 39209015 + MGP_NODShiLtJ_P0047315 Rnf39 protein_coding protein_coding MGP_NODShiLtJ_T0047316.1 MGP_NODShiLtJ_G0023512.1 mouse_genomes_project 17 39208477 39210686 + MGP_NODShiLtJ_P0047316 Rnf39 protein_coding protein_coding MGP_NODShiLtJ_T0010114.1 MGP_NODShiLtJ_G0008247.1 mouse_genomes_project 17 38001007 38001092 - Mir877 miRNA miRNA MGP_NODShiLtJ_T0003683.1 MGP_NODShiLtJ_G0003315.1 mouse_genomes_project 17 32445942 32455764 + Gm15318 antisense antisense MGP_NODShiLtJ_T0003684.1 MGP_NODShiLtJ_G0003315.1 mouse_genomes_project 17 32445942 32456493 + Gm15318 antisense antisense MGP_NODShiLtJ_T0003685.1 MGP_NODShiLtJ_G0003315.1 mouse_genomes_project 17 32445942 32454930 + Gm15318 antisense antisense MGP_NODShiLtJ_T0047883.1 MGP_NODShiLtJ_G0023709.1 mouse_genomes_project 17 57739050 58164073 + MGP_NODShiLtJ_P0047883 Kcnh8 protein_coding protein_coding MGP_NODShiLtJ_T0047884.1 MGP_NODShiLtJ_G0023709.1 mouse_genomes_project 17 58126411 58163259 + Kcnh8 protein_coding retained_intron MGP_NODShiLtJ_T0000957.1 MGP_NODShiLtJ_G0000884.1 mouse_genomes_project 17 9225826 9230853 + TEC TEC MGP_NODShiLtJ_T0101744.1 MGP_NODShiLtJ_G0039912.1 mouse_genomes_project 17 38725212 38726436 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048520.1 MGP_NODShiLtJ_G0023940.1 mouse_genomes_project 17 106756145 106783896 - MGP_NODShiLtJ_P0048520 Mettl4 protein_coding protein_coding MGP_NODShiLtJ_T0010078.1 MGP_NODShiLtJ_G0008211.1 mouse_genomes_project 17 16776822 16776890 + Mir125a miRNA miRNA MGP_NODShiLtJ_T0046099.1 MGP_NODShiLtJ_G0023237.1 mouse_genomes_project 17 28437783 28445825 + MGP_NODShiLtJ_P0046099 Hmga1-rs1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046100.1 MGP_NODShiLtJ_G0023237.1 mouse_genomes_project 17 28437790 28446858 + MGP_NODShiLtJ_P0046100 Hmga1-rs1 protein_coding protein_coding MGP_NODShiLtJ_T0046101.1 MGP_NODShiLtJ_G0023237.1 mouse_genomes_project 17 28437793 28446861 + MGP_NODShiLtJ_P0046101 Hmga1-rs1 protein_coding protein_coding MGP_NODShiLtJ_T0046102.1 MGP_NODShiLtJ_G0023237.1 mouse_genomes_project 17 28437811 28446359 + MGP_NODShiLtJ_P0046102 Hmga1-rs1 protein_coding protein_coding MGP_NODShiLtJ_T0046103.1 MGP_NODShiLtJ_G0023237.1 mouse_genomes_project 17 28437838 28446394 + MGP_NODShiLtJ_P0046103 Hmga1-rs1 protein_coding protein_coding MGP_NODShiLtJ_T0046104.1 MGP_NODShiLtJ_G0023237.1 mouse_genomes_project 17 28437838 28446856 + MGP_NODShiLtJ_P0046104 Hmga1-rs1 protein_coding protein_coding MGP_NODShiLtJ_T0048297.1 MGP_NODShiLtJ_G0023858.1 mouse_genomes_project 17 87967594 88067540 + MGP_NODShiLtJ_P0048297 Vit protein_coding protein_coding MGP_NODShiLtJ_T0013120.1 MGP_NODShiLtJ_G0011228.1 mouse_genomes_project 17 38284537 38285081 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006869.1 MGP_NODShiLtJ_G0005648.1 mouse_genomes_project 17 30605121 30638581 - Gm26885 lincRNA lincRNA MGP_NODShiLtJ_T0101732.1 MGP_NODShiLtJ_G0039901.1 mouse_genomes_project 17 38085608 38088709 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100243.1 MGP_NODShiLtJ_G0038637.1 mouse_genomes_project 17 11010299 11010437 + Gm26130 snoRNA snoRNA MGP_NODShiLtJ_T0010104.1 MGP_NODShiLtJ_G0008237.1 mouse_genomes_project 17 36554677 36554744 - Gm27471 miRNA miRNA MGP_NODShiLtJ_T0046064.1 MGP_NODShiLtJ_G0023227.1 mouse_genomes_project 17 27735306 27736802 - MGP_NODShiLtJ_P0046064 Cuta protein_coding protein_coding MGP_NODShiLtJ_T0046065.1 MGP_NODShiLtJ_G0023227.1 mouse_genomes_project 17 27735306 27736812 - MGP_NODShiLtJ_P0046065 Cuta protein_coding protein_coding MGP_NODShiLtJ_T0045383.1 MGP_NODShiLtJ_G0023020.1 mouse_genomes_project 17 18904019 18924722 + MGP_NODShiLtJ_P0045383 protein_coding protein_coding MGP_NODShiLtJ_T0003699.1 MGP_NODShiLtJ_G0003325.1 mouse_genomes_project 17 37492383 37495064 - antisense antisense MGP_NODShiLtJ_T0045985.1 MGP_NODShiLtJ_G0023209.1 mouse_genomes_project 17 26830662 26833754 + MGP_NODShiLtJ_P0045985 Mrpl28 protein_coding protein_coding MGP_NODShiLtJ_T0045986.1 MGP_NODShiLtJ_G0023209.1 mouse_genomes_project 17 26830861 26832073 + Mrpl28 protein_coding retained_intron MGP_NODShiLtJ_T0045697.1 MGP_NODShiLtJ_G0023143.1 mouse_genomes_project 17 25469740 25471146 - MGP_NODShiLtJ_P0045697 Fahd1 protein_coding protein_coding MGP_NODShiLtJ_T0003658.1 MGP_NODShiLtJ_G0003298.1 mouse_genomes_project 17 10804503 10930453 + antisense antisense MGP_NODShiLtJ_T0003659.1 MGP_NODShiLtJ_G0003298.1 mouse_genomes_project 17 10804522 10898578 + antisense antisense MGP_NODShiLtJ_T0003660.1 MGP_NODShiLtJ_G0003298.1 mouse_genomes_project 17 10804566 10883790 + antisense antisense MGP_NODShiLtJ_T0003661.1 MGP_NODShiLtJ_G0003298.1 mouse_genomes_project 17 10804577 10882951 + antisense antisense MGP_NODShiLtJ_T0003662.1 MGP_NODShiLtJ_G0003298.1 mouse_genomes_project 17 10804590 10898479 + antisense antisense MGP_NODShiLtJ_T0003663.1 MGP_NODShiLtJ_G0003298.1 mouse_genomes_project 17 10884177 10898663 + antisense antisense MGP_NODShiLtJ_T0003694.1 MGP_NODShiLtJ_G0003321.1 mouse_genomes_project 17 35924908 35930677 - Gm20496 antisense antisense MGP_NODShiLtJ_T0003695.1 MGP_NODShiLtJ_G0003321.1 mouse_genomes_project 17 35925566 35932149 - Gm20496 antisense antisense MGP_NODShiLtJ_T0099005.1 MGP_NODShiLtJ_G0037399.1 mouse_genomes_project 17 55847779 55847896 - Gm25177 snRNA snRNA MGP_NODShiLtJ_T0047055.1 MGP_NODShiLtJ_G0023447.1 mouse_genomes_project 17 37098317 37099185 - Aif1 protein_coding retained_intron MGP_NODShiLtJ_T0047056.1 MGP_NODShiLtJ_G0023447.1 mouse_genomes_project 17 37098317 37100092 - MGP_NODShiLtJ_P0047056 Aif1 protein_coding protein_coding MGP_NODShiLtJ_T0047057.1 MGP_NODShiLtJ_G0023447.1 mouse_genomes_project 17 37098318 37104501 - MGP_NODShiLtJ_P0047057 Aif1 protein_coding protein_coding MGP_NODShiLtJ_T0047058.1 MGP_NODShiLtJ_G0023447.1 mouse_genomes_project 17 37098320 37100551 - MGP_NODShiLtJ_P0047058 Aif1 protein_coding protein_coding MGP_NODShiLtJ_T0047059.1 MGP_NODShiLtJ_G0023447.1 mouse_genomes_project 17 37098322 37104568 - Aif1 protein_coding processed_transcript MGP_NODShiLtJ_T0047060.1 MGP_NODShiLtJ_G0023447.1 mouse_genomes_project 17 37098849 37099904 - MGP_NODShiLtJ_P0047060 Aif1 protein_coding protein_coding MGP_NODShiLtJ_T0047061.1 MGP_NODShiLtJ_G0023447.1 mouse_genomes_project 17 37099802 37104501 - Aif1 protein_coding retained_intron MGP_NODShiLtJ_T0099004.1 MGP_NODShiLtJ_G0037398.1 mouse_genomes_project 17 54090543 54090704 + Gm22978 snRNA snRNA MGP_NODShiLtJ_T0045152.1 MGP_NODShiLtJ_G0022947.1 mouse_genomes_project 17 4620933 4693192 + MGP_NODShiLtJ_P0045152 protein_coding protein_coding MGP_NODShiLtJ_T0048223.1 MGP_NODShiLtJ_G0023832.1 mouse_genomes_project 17 79841827 79887411 + MGP_NODShiLtJ_P0048223 Wdr43 protein_coding protein_coding MGP_NODShiLtJ_T0003728.1 MGP_NODShiLtJ_G0003347.1 mouse_genomes_project 17 72289319 72294566 - Gm17133 antisense antisense MGP_NODShiLtJ_T0045322.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941119 13945839 + MGP_NODShiLtJ_P0045322 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045323.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941119 13958716 + MGP_NODShiLtJ_P0045323 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045324.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941119 13970074 + MGP_NODShiLtJ_P0045324 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045325.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941132 13948691 + MGP_NODShiLtJ_P0045325 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045326.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941141 13958716 + MGP_NODShiLtJ_P0045326 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045327.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941143 13948596 + MGP_NODShiLtJ_P0045327 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045328.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941153 13955651 + MGP_NODShiLtJ_P0045328 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045329.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941159 13945681 + MGP_NODShiLtJ_P0045329 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045330.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13941191 13958716 + MGP_NODShiLtJ_P0045330 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045331.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13945816 13958157 + MGP_NODShiLtJ_P0045331 Tbp protein_coding protein_coding MGP_NODShiLtJ_T0045332.1 MGP_NODShiLtJ_G0023000.1 mouse_genomes_project 17 13956766 13958224 + Tbp protein_coding retained_intron MGP_NODShiLtJ_T0045402.1 MGP_NODShiLtJ_G0023039.1 mouse_genomes_project 17 20836951 20837887 - MGP_NODShiLtJ_P0045402 Vmn1r231 protein_coding protein_coding MGP_NODShiLtJ_T0046897.1 MGP_NODShiLtJ_G0023415.1 mouse_genomes_project 17 36739817 36745824 + MGP_NODShiLtJ_P0046897 Nelfe protein_coding protein_coding MGP_NODShiLtJ_T0046898.1 MGP_NODShiLtJ_G0023415.1 mouse_genomes_project 17 36739824 36745709 + MGP_NODShiLtJ_P0046898 Nelfe protein_coding protein_coding MGP_NODShiLtJ_T0046899.1 MGP_NODShiLtJ_G0023415.1 mouse_genomes_project 17 36739834 36743539 + MGP_NODShiLtJ_P0046899 Nelfe protein_coding protein_coding MGP_NODShiLtJ_T0046900.1 MGP_NODShiLtJ_G0023415.1 mouse_genomes_project 17 36739834 36745827 + MGP_NODShiLtJ_P0046900 Nelfe protein_coding protein_coding MGP_NODShiLtJ_T0046901.1 MGP_NODShiLtJ_G0023415.1 mouse_genomes_project 17 36742034 36743295 + Nelfe protein_coding retained_intron MGP_NODShiLtJ_T0046902.1 MGP_NODShiLtJ_G0023415.1 mouse_genomes_project 17 36743361 36743976 + Nelfe protein_coding retained_intron MGP_NODShiLtJ_T0046903.1 MGP_NODShiLtJ_G0023415.1 mouse_genomes_project 17 36743705 36744204 + Nelfe protein_coding retained_intron MGP_NODShiLtJ_T0048040.1 MGP_NODShiLtJ_G0023780.1 mouse_genomes_project 17 63092196 63116217 - MGP_NODShiLtJ_P0048040 C3 protein_coding protein_coding MGP_NODShiLtJ_T0048041.1 MGP_NODShiLtJ_G0023780.1 mouse_genomes_project 17 63092233 63110912 - MGP_NODShiLtJ_P0048041 C3 protein_coding protein_coding MGP_NODShiLtJ_T0048042.1 MGP_NODShiLtJ_G0023780.1 mouse_genomes_project 17 63094443 63116084 - MGP_NODShiLtJ_P0048042 C3 protein_coding protein_coding MGP_NODShiLtJ_T0048043.1 MGP_NODShiLtJ_G0023780.1 mouse_genomes_project 17 63103872 63108057 - C3 protein_coding processed_transcript MGP_NODShiLtJ_T0011315.1 MGP_NODShiLtJ_G0009448.1 mouse_genomes_project 17 39227699 39227775 - Gm27735 misc_RNA misc_RNA MGP_NODShiLtJ_T0047432.1 MGP_NODShiLtJ_G0023583.1 mouse_genomes_project 17 44361654 44366753 + MGP_NODShiLtJ_P0047432 Esp1 protein_coding protein_coding MGP_NODShiLtJ_T0047313.1 MGP_NODShiLtJ_G0023511.1 mouse_genomes_project 17 39158739 39171607 + MGP_NODShiLtJ_P0047313 Trim31 protein_coding protein_coding MGP_NODShiLtJ_T0017423.1 MGP_NODShiLtJ_G0015217.1 mouse_genomes_project 17 35741576 35747115 - Gm20427 processed_transcript retained_intron MGP_NODShiLtJ_T0101772.1 MGP_NODShiLtJ_G0039940.1 mouse_genomes_project 17 59179792 59180353 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045857.1 MGP_NODShiLtJ_G0023179.1 mouse_genomes_project 17 26384709 26393163 - MGP_NODShiLtJ_P0045857 Chtf18 protein_coding protein_coding MGP_NODShiLtJ_T0045858.1 MGP_NODShiLtJ_G0023179.1 mouse_genomes_project 17 26384709 26393115 - MGP_NODShiLtJ_P0045858 Chtf18 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045859.1 MGP_NODShiLtJ_G0023179.1 mouse_genomes_project 17 26384813 26393110 - Chtf18 protein_coding retained_intron MGP_NODShiLtJ_T0045860.1 MGP_NODShiLtJ_G0023179.1 mouse_genomes_project 17 26384829 26386685 - MGP_NODShiLtJ_P0045860 Chtf18 protein_coding protein_coding MGP_NODShiLtJ_T0045861.1 MGP_NODShiLtJ_G0023179.1 mouse_genomes_project 17 26384830 26385569 - MGP_NODShiLtJ_P0045861 Chtf18 protein_coding protein_coding MGP_NODShiLtJ_T0045862.1 MGP_NODShiLtJ_G0023179.1 mouse_genomes_project 17 26386052 26386682 - Chtf18 protein_coding retained_intron MGP_NODShiLtJ_T0045863.1 MGP_NODShiLtJ_G0023179.1 mouse_genomes_project 17 26391319 26393154 - MGP_NODShiLtJ_P0045863 Chtf18 protein_coding protein_coding MGP_NODShiLtJ_T0047431.1 MGP_NODShiLtJ_G0023582.1 mouse_genomes_project 17 44237439 44243390 + MGP_NODShiLtJ_P0047431 protein_coding protein_coding MGP_NODShiLtJ_T0047888.1 MGP_NODShiLtJ_G0023713.1 mouse_genomes_project 17 58817622 58888804 + Kat2b protein_coding processed_transcript MGP_NODShiLtJ_T0047889.1 MGP_NODShiLtJ_G0023713.1 mouse_genomes_project 17 58817732 58942595 + MGP_NODShiLtJ_P0047889 Kat2b protein_coding protein_coding MGP_NODShiLtJ_T0047890.1 MGP_NODShiLtJ_G0023713.1 mouse_genomes_project 17 58835375 58904353 + MGP_NODShiLtJ_P0047890 Kat2b protein_coding protein_coding MGP_NODShiLtJ_T0047891.1 MGP_NODShiLtJ_G0023713.1 mouse_genomes_project 17 58910659 58941946 + MGP_NODShiLtJ_P0047891 Kat2b protein_coding protein_coding MGP_NODShiLtJ_T0047892.1 MGP_NODShiLtJ_G0023713.1 mouse_genomes_project 17 58927335 58932681 + Kat2b protein_coding retained_intron MGP_NODShiLtJ_T0047893.1 MGP_NODShiLtJ_G0023713.1 mouse_genomes_project 17 58927408 58932704 + Kat2b protein_coding retained_intron MGP_NODShiLtJ_T0047894.1 MGP_NODShiLtJ_G0023713.1 mouse_genomes_project 17 58927492 58939754 + MGP_NODShiLtJ_P0047894 Kat2b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046371.1 MGP_NODShiLtJ_G0023296.1 mouse_genomes_project 17 32217469 32282446 + MGP_NODShiLtJ_P0046371 Umodl1 protein_coding protein_coding MGP_NODShiLtJ_T0046372.1 MGP_NODShiLtJ_G0023296.1 mouse_genomes_project 17 32217469 32282446 + MGP_NODShiLtJ_P0046372 Umodl1 protein_coding protein_coding MGP_NODShiLtJ_T0046373.1 MGP_NODShiLtJ_G0023296.1 mouse_genomes_project 17 32217473 32282446 + MGP_NODShiLtJ_P0046373 Umodl1 protein_coding protein_coding MGP_NODShiLtJ_T0010115.1 MGP_NODShiLtJ_G0008248.1 mouse_genomes_project 17 42741089 42741199 - Gm26429 miRNA miRNA MGP_NODShiLtJ_T0046792.1 MGP_NODShiLtJ_G0023397.1 mouse_genomes_project 17 36304532 36316467 - Btnl6 protein_coding unprocessed_pseudogene MGP_NODShiLtJ_T0046793.1 MGP_NODShiLtJ_G0023397.1 mouse_genomes_project 17 36304661 36316467 - MGP_NODShiLtJ_P0046793 Btnl6 protein_coding protein_coding MGP_NODShiLtJ_T0101753.1 MGP_NODShiLtJ_G0039921.1 mouse_genomes_project 17 38964392 38964440 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046517.1 MGP_NODShiLtJ_G0023333.1 mouse_genomes_project 17 34412283 34424488 - MGP_NODShiLtJ_P0046517 Cyp4f14 protein_coding protein_coding MGP_NODShiLtJ_T0046518.1 MGP_NODShiLtJ_G0023333.1 mouse_genomes_project 17 34412283 34424233 - MGP_NODShiLtJ_P0046518 Cyp4f14 protein_coding protein_coding MGP_NODShiLtJ_T0046149.1 MGP_NODShiLtJ_G0023248.1 mouse_genomes_project 17 28836547 28992660 + MGP_NODShiLtJ_P0046149 Anks1 protein_coding protein_coding MGP_NODShiLtJ_T0046150.1 MGP_NODShiLtJ_G0023248.1 mouse_genomes_project 17 28836579 28992657 + MGP_NODShiLtJ_P0046150 Anks1 protein_coding protein_coding MGP_NODShiLtJ_T0046151.1 MGP_NODShiLtJ_G0023248.1 mouse_genomes_project 17 28836579 28992657 + MGP_NODShiLtJ_P0046151 Anks1 protein_coding protein_coding MGP_NODShiLtJ_T0046152.1 MGP_NODShiLtJ_G0023248.1 mouse_genomes_project 17 28937655 28992659 + Anks1 protein_coding processed_transcript MGP_NODShiLtJ_T0047939.1 MGP_NODShiLtJ_G0023736.1 mouse_genomes_project 17 61902036 61904303 - MGP_NODShiLtJ_P0047939 Lrg1 protein_coding protein_coding MGP_NODShiLtJ_T0013176.1 MGP_NODShiLtJ_G0011284.1 mouse_genomes_project 17 88526273 88527250 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006897.1 MGP_NODShiLtJ_G0005672.1 mouse_genomes_project 17 52515390 52517776 + lincRNA lincRNA MGP_NODShiLtJ_T0048348.1 MGP_NODShiLtJ_G0023881.1 mouse_genomes_project 17 89873043 89886345 + MGP_NODShiLtJ_P0048348 Morn2 protein_coding protein_coding MGP_NODShiLtJ_T0003700.1 MGP_NODShiLtJ_G0003326.1 mouse_genomes_project 17 37650012 37658530 + Gm20483 antisense antisense MGP_NODShiLtJ_T0048281.1 MGP_NODShiLtJ_G0023852.1 mouse_genomes_project 17 83323339 83497650 + MGP_NODShiLtJ_P0048281 Ttc27 protein_coding protein_coding MGP_NODShiLtJ_T0100244.1 MGP_NODShiLtJ_G0038638.1 mouse_genomes_project 17 11013496 11013624 + Snora20 snoRNA snoRNA MGP_NODShiLtJ_T0045751.1 MGP_NODShiLtJ_G0023154.1 mouse_genomes_project 17 25643450 25720326 + MGP_NODShiLtJ_P0045751 Ift140 protein_coding protein_coding MGP_NODShiLtJ_T0045752.1 MGP_NODShiLtJ_G0023154.1 mouse_genomes_project 17 25643750 25727058 + MGP_NODShiLtJ_P0045752 Ift140 protein_coding protein_coding MGP_NODShiLtJ_T0045753.1 MGP_NODShiLtJ_G0023154.1 mouse_genomes_project 17 25643758 25646267 + Ift140 protein_coding processed_transcript MGP_NODShiLtJ_T0045754.1 MGP_NODShiLtJ_G0023154.1 mouse_genomes_project 17 25653856 25724309 + Ift140 protein_coding retained_intron MGP_NODShiLtJ_T0045755.1 MGP_NODShiLtJ_G0023154.1 mouse_genomes_project 17 25654092 25665502 + MGP_NODShiLtJ_P0045755 Ift140 protein_coding protein_coding MGP_NODShiLtJ_T0045756.1 MGP_NODShiLtJ_G0023154.1 mouse_genomes_project 17 25672824 25715386 + Ift140 protein_coding processed_transcript MGP_NODShiLtJ_T0045757.1 MGP_NODShiLtJ_G0023154.1 mouse_genomes_project 17 25672873 25727066 + Ift140 protein_coding processed_transcript MGP_NODShiLtJ_T0045760.1 MGP_NODShiLtJ_G0023154.1 mouse_genomes_project 17 25718065 25720669 + Ift140 protein_coding retained_intron MGP_NODShiLtJ_T0101726.1 MGP_NODShiLtJ_G0039895.1 mouse_genomes_project 17 36553931 36555327 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045233.1 MGP_NODShiLtJ_G0022974.1 mouse_genomes_project 17 10744554 10832713 - MGP_NODShiLtJ_P0045233 Igf2r protein_coding protein_coding MGP_NODShiLtJ_T0045234.1 MGP_NODShiLtJ_G0022974.1 mouse_genomes_project 17 10761605 10764358 - MGP_NODShiLtJ_P0045234 Igf2r protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045235.1 MGP_NODShiLtJ_G0022974.1 mouse_genomes_project 17 10811868 10814633 - MGP_NODShiLtJ_P0045235 Igf2r protein_coding protein_coding MGP_NODShiLtJ_T0101701.1 MGP_NODShiLtJ_G0039870.1 mouse_genomes_project 17 20921302 20921726 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048081.1 MGP_NODShiLtJ_G0023797.1 mouse_genomes_project 17 72836344 73150892 - MGP_NODShiLtJ_P0048081 Tmem232 protein_coding protein_coding MGP_NODShiLtJ_T0048082.1 MGP_NODShiLtJ_G0023797.1 mouse_genomes_project 17 72836346 73150886 - MGP_NODShiLtJ_P0048082 Tmem232 protein_coding protein_coding MGP_NODShiLtJ_T0047926.1 MGP_NODShiLtJ_G0023731.1 mouse_genomes_project 17 61815411 61844841 + MGP_NODShiLtJ_P0047926 Chaf1a protein_coding protein_coding MGP_NODShiLtJ_T0045294.1 MGP_NODShiLtJ_G0022990.1 mouse_genomes_project 17 13075991 13108994 - MGP_NODShiLtJ_P0045294 Thbs2 protein_coding protein_coding MGP_NODShiLtJ_T0047410.1 MGP_NODShiLtJ_G0023564.1 mouse_genomes_project 17 40730074 40733556 + MGP_NODShiLtJ_P0047410 Olfr133 protein_coding protein_coding MGP_NODShiLtJ_T0047411.1 MGP_NODShiLtJ_G0023564.1 mouse_genomes_project 17 40733182 40762354 + MGP_NODShiLtJ_P0047411 Olfr133 protein_coding protein_coding MGP_NODShiLtJ_T0013167.1 MGP_NODShiLtJ_G0011275.1 mouse_genomes_project 17 78453770 78454214 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101737.1 MGP_NODShiLtJ_G0039905.1 mouse_genomes_project 17 38282873 38288688 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006878.1 MGP_NODShiLtJ_G0005656.1 mouse_genomes_project 17 35740514 35740619 - Gm26940 lincRNA lincRNA MGP_NODShiLtJ_T0000959.1 MGP_NODShiLtJ_G0000886.1 mouse_genomes_project 17 9729195 9735663 - TEC TEC MGP_NODShiLtJ_T0045333.1 MGP_NODShiLtJ_G0023001.1 mouse_genomes_project 17 13960950 13968980 - MGP_NODShiLtJ_P0045333 Pdcd2 protein_coding protein_coding MGP_NODShiLtJ_T0045334.1 MGP_NODShiLtJ_G0023001.1 mouse_genomes_project 17 13963318 13969000 - MGP_NODShiLtJ_P0045334 Pdcd2 protein_coding protein_coding MGP_NODShiLtJ_T0045335.1 MGP_NODShiLtJ_G0023001.1 mouse_genomes_project 17 13963336 13963878 - Pdcd2 protein_coding retained_intron MGP_NODShiLtJ_T0045336.1 MGP_NODShiLtJ_G0023001.1 mouse_genomes_project 17 13964437 13968783 - Pdcd2 protein_coding retained_intron MGP_NODShiLtJ_T0045337.1 MGP_NODShiLtJ_G0023001.1 mouse_genomes_project 17 13964525 13968685 - Pdcd2 protein_coding retained_intron MGP_NODShiLtJ_T0100250.1 MGP_NODShiLtJ_G0038644.1 mouse_genomes_project 17 26905875 26906019 + Gm23123 snoRNA snoRNA MGP_NODShiLtJ_T0045712.1 MGP_NODShiLtJ_G0023148.1 mouse_genomes_project 17 25510583 25517063 - MGP_NODShiLtJ_P0045712 Eme2 protein_coding protein_coding MGP_NODShiLtJ_T0045713.1 MGP_NODShiLtJ_G0023148.1 mouse_genomes_project 17 25514158 25517095 - MGP_NODShiLtJ_P0045713 Eme2 protein_coding protein_coding MGP_NODShiLtJ_T0045715.1 MGP_NODShiLtJ_G0023148.1 mouse_genomes_project 17 25514161 25517067 - MGP_NODShiLtJ_P0045715 Eme2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045716.1 MGP_NODShiLtJ_G0023148.1 mouse_genomes_project 17 25514486 25517086 - Eme2 protein_coding retained_intron MGP_NODShiLtJ_T0045717.1 MGP_NODShiLtJ_G0023148.1 mouse_genomes_project 17 25514786 25516192 - Eme2 protein_coding retained_intron MGP_NODShiLtJ_T0045718.1 MGP_NODShiLtJ_G0023148.1 mouse_genomes_project 17 25515145 25517063 - Eme2 protein_coding retained_intron MGP_NODShiLtJ_T0045719.1 MGP_NODShiLtJ_G0023148.1 mouse_genomes_project 17 25515368 25517070 - Eme2 protein_coding retained_intron MGP_NODShiLtJ_T0045720.1 MGP_NODShiLtJ_G0023148.1 mouse_genomes_project 17 25515753 25517033 - Eme2 protein_coding retained_intron MGP_NODShiLtJ_T0048242.1 MGP_NODShiLtJ_G0023840.1 mouse_genomes_project 17 81684140 81782736 - MGP_NODShiLtJ_P0048242 Capn13 protein_coding protein_coding MGP_NODShiLtJ_T0099007.1 MGP_NODShiLtJ_G0037401.1 mouse_genomes_project 17 63645707 63645819 + Gm25102 snRNA snRNA MGP_NODShiLtJ_T0045494.1 MGP_NODShiLtJ_G0023083.1 mouse_genomes_project 17 24149127 24152214 + MGP_NODShiLtJ_P0045494 Cldn6 protein_coding protein_coding MGP_NODShiLtJ_T0047637.1 MGP_NODShiLtJ_G0023638.1 mouse_genomes_project 17 50871385 50874202 + MGP_NODShiLtJ_P0047637 Crip3 protein_coding protein_coding MGP_NODShiLtJ_T0047638.1 MGP_NODShiLtJ_G0023638.1 mouse_genomes_project 17 50871401 50874003 + Crip3 protein_coding retained_intron MGP_NODShiLtJ_T0047639.1 MGP_NODShiLtJ_G0023638.1 mouse_genomes_project 17 50871401 50874197 + MGP_NODShiLtJ_P0047639 Crip3 protein_coding protein_coding MGP_NODShiLtJ_T0047640.1 MGP_NODShiLtJ_G0023638.1 mouse_genomes_project 17 50871410 50873841 + MGP_NODShiLtJ_P0047640 Crip3 protein_coding protein_coding MGP_NODShiLtJ_T0047641.1 MGP_NODShiLtJ_G0023638.1 mouse_genomes_project 17 50871429 50872911 + Crip3 protein_coding processed_transcript MGP_NODShiLtJ_T0047642.1 MGP_NODShiLtJ_G0023638.1 mouse_genomes_project 17 50873100 50874148 + Crip3 protein_coding retained_intron MGP_NODShiLtJ_T0047643.1 MGP_NODShiLtJ_G0023638.1 mouse_genomes_project 17 50873390 50874123 + Crip3 protein_coding retained_intron MGP_NODShiLtJ_T0047477.1 MGP_NODShiLtJ_G0023605.1 mouse_genomes_project 17 48280091 48288572 + MGP_NODShiLtJ_P0047477 Enpp5 protein_coding protein_coding MGP_NODShiLtJ_T0047478.1 MGP_NODShiLtJ_G0023605.1 mouse_genomes_project 17 48280123 48288563 + MGP_NODShiLtJ_P0047478 Enpp5 protein_coding protein_coding MGP_NODShiLtJ_T0047479.1 MGP_NODShiLtJ_G0023605.1 mouse_genomes_project 17 48280157 48288572 + MGP_NODShiLtJ_P0047479 Enpp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047351.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39315952 39346471 + MGP_NODShiLtJ_P0047351 Gabbr1 protein_coding protein_coding MGP_NODShiLtJ_T0047352.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39316006 39345694 + MGP_NODShiLtJ_P0047352 Gabbr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047353.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39316014 39319496 + MGP_NODShiLtJ_P0047353 Gabbr1 protein_coding protein_coding MGP_NODShiLtJ_T0047354.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39316185 39316827 + Gabbr1 protein_coding retained_intron MGP_NODShiLtJ_T0047355.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39316554 39319496 + MGP_NODShiLtJ_P0047355 Gabbr1 protein_coding protein_coding MGP_NODShiLtJ_T0047356.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39318606 39321156 + Gabbr1 protein_coding processed_transcript MGP_NODShiLtJ_T0047357.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39320659 39345708 + MGP_NODShiLtJ_P0047357 Gabbr1 protein_coding protein_coding MGP_NODShiLtJ_T0047358.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39320702 39326386 + MGP_NODShiLtJ_P0047358 Gabbr1 protein_coding protein_coding MGP_NODShiLtJ_T0047359.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39325740 39326892 + Gabbr1 protein_coding retained_intron MGP_NODShiLtJ_T0047360.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39333033 39334906 + Gabbr1 protein_coding retained_intron MGP_NODShiLtJ_T0047361.1 MGP_NODShiLtJ_G0023520.1 mouse_genomes_project 17 39341857 39343636 + Gabbr1 protein_coding retained_intron MGP_NODShiLtJ_T0047413.1 MGP_NODShiLtJ_G0023566.1 mouse_genomes_project 17 40804419 40805498 + MGP_NODShiLtJ_P0047413 Olfr135 protein_coding protein_coding MGP_NODShiLtJ_T0048466.1 MGP_NODShiLtJ_G0023930.1 mouse_genomes_project 17 98437330 98464385 - MGP_NODShiLtJ_P0048466 Fbxo11 protein_coding protein_coding MGP_NODShiLtJ_T0048467.1 MGP_NODShiLtJ_G0023930.1 mouse_genomes_project 17 98437378 98515199 - MGP_NODShiLtJ_P0048467 Fbxo11 protein_coding protein_coding MGP_NODShiLtJ_T0048468.1 MGP_NODShiLtJ_G0023930.1 mouse_genomes_project 17 98437889 98456366 - MGP_NODShiLtJ_P0048468 Fbxo11 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048469.1 MGP_NODShiLtJ_G0023930.1 mouse_genomes_project 17 98439709 98447481 - Fbxo11 protein_coding retained_intron MGP_NODShiLtJ_T0046366.1 MGP_NODShiLtJ_G0023292.1 mouse_genomes_project 17 31422351 31798211 - MGP_NODShiLtJ_P0046366 Btbd9 protein_coding protein_coding MGP_NODShiLtJ_T0046367.1 MGP_NODShiLtJ_G0023292.1 mouse_genomes_project 17 31422351 31798211 - MGP_NODShiLtJ_P0046367 Btbd9 protein_coding protein_coding MGP_NODShiLtJ_T0045462.1 MGP_NODShiLtJ_G0023073.1 mouse_genomes_project 17 23691095 23724543 + MGP_NODShiLtJ_P0045462 protein_coding protein_coding MGP_NODShiLtJ_T0017408.1 MGP_NODShiLtJ_G0015209.1 mouse_genomes_project 17 24756557 24769300 + BC028777 processed_transcript processed_transcript MGP_NODShiLtJ_T0017409.1 MGP_NODShiLtJ_G0015209.1 mouse_genomes_project 17 24760202 24769485 + BC028777 processed_transcript processed_transcript MGP_NODShiLtJ_T0048235.1 MGP_NODShiLtJ_G0023838.1 mouse_genomes_project 17 81270512 81297982 + MGP_NODShiLtJ_P0048235 Lbh protein_coding protein_coding MGP_NODShiLtJ_T0048236.1 MGP_NODShiLtJ_G0023838.1 mouse_genomes_project 17 81274708 81293440 + MGP_NODShiLtJ_P0048236 Lbh protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0000973.1 MGP_NODShiLtJ_G0000899.1 mouse_genomes_project 17 59598132 59598458 + TEC TEC MGP_NODShiLtJ_T0006843.1 MGP_NODShiLtJ_G0005628.1 mouse_genomes_project 17 16233747 16240178 - Gm26873 lincRNA lincRNA MGP_NODShiLtJ_T0003736.1 MGP_NODShiLtJ_G0003355.1 mouse_genomes_project 17 97694217 97696441 - 0610012D04Rik antisense antisense MGP_NODShiLtJ_T0010100.1 MGP_NODShiLtJ_G0008233.1 mouse_genomes_project 17 33840034 33840093 + Gm22201 miRNA miRNA MGP_NODShiLtJ_T0047417.1 MGP_NODShiLtJ_G0023568.1 mouse_genomes_project 17 40917730 40918670 - MGP_NODShiLtJ_P0047417 Olfr137 protein_coding protein_coding MGP_NODShiLtJ_T0013113.1 MGP_NODShiLtJ_G0011221.1 mouse_genomes_project 17 35791295 35793698 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045658.1 MGP_NODShiLtJ_G0023128.1 mouse_genomes_project 17 25232044 25238185 + MGP_NODShiLtJ_P0045658 Nthl1 protein_coding protein_coding MGP_NODShiLtJ_T0045441.1 MGP_NODShiLtJ_G0023062.1 mouse_genomes_project 17 22038490 22078100 - MGP_NODShiLtJ_P0045441 Zfp942 protein_coding protein_coding MGP_NODShiLtJ_T0045264.1 MGP_NODShiLtJ_G0022982.1 mouse_genomes_project 17 11109164 11134039 - MGP_NODShiLtJ_P0045264 protein_coding protein_coding MGP_NODShiLtJ_T0045265.1 MGP_NODShiLtJ_G0022982.1 mouse_genomes_project 17 11109167 11133801 - MGP_NODShiLtJ_P0045265 protein_coding protein_coding MGP_NODShiLtJ_T0045266.1 MGP_NODShiLtJ_G0022982.1 mouse_genomes_project 17 11115032 11133734 - MGP_NODShiLtJ_P0045266 protein_coding protein_coding MGP_NODShiLtJ_T0045267.1 MGP_NODShiLtJ_G0022982.1 mouse_genomes_project 17 11117908 11133778 - MGP_NODShiLtJ_P0045267 protein_coding protein_coding MGP_NODShiLtJ_T0045268.1 MGP_NODShiLtJ_G0022982.1 mouse_genomes_project 17 11122555 11124743 - protein_coding processed_transcript MGP_NODShiLtJ_T0047713.1 MGP_NODShiLtJ_G0023668.1 mouse_genomes_project 17 51958183 51985197 - MGP_NODShiLtJ_P0047713 1700001C19Rik protein_coding protein_coding MGP_NODShiLtJ_T0047714.1 MGP_NODShiLtJ_G0023668.1 mouse_genomes_project 17 51958824 51967235 - MGP_NODShiLtJ_P0047714 1700001C19Rik protein_coding protein_coding MGP_NODShiLtJ_T0047715.1 MGP_NODShiLtJ_G0023668.1 mouse_genomes_project 17 51958832 51960160 - 1700001C19Rik protein_coding processed_transcript MGP_NODShiLtJ_T0047716.1 MGP_NODShiLtJ_G0023668.1 mouse_genomes_project 17 51959077 51985198 - 1700001C19Rik protein_coding processed_transcript MGP_NODShiLtJ_T0048352.1 MGP_NODShiLtJ_G0023884.1 mouse_genomes_project 17 89989945 90086465 - MGP_NODShiLtJ_P0048352 Sos1 protein_coding protein_coding MGP_NODShiLtJ_T0045620.1 MGP_NODShiLtJ_G0023122.1 mouse_genomes_project 17 25062462 25064048 + MGP_NODShiLtJ_P0045620 Bricd5 protein_coding protein_coding MGP_NODShiLtJ_T0045621.1 MGP_NODShiLtJ_G0023122.1 mouse_genomes_project 17 25062545 25063966 + MGP_NODShiLtJ_P0045621 Bricd5 protein_coding protein_coding MGP_NODShiLtJ_T0047943.1 MGP_NODShiLtJ_G0023739.1 mouse_genomes_project 17 61957929 61966060 - MGP_NODShiLtJ_P0047943 Mydgf protein_coding protein_coding MGP_NODShiLtJ_T0047944.1 MGP_NODShiLtJ_G0023739.1 mouse_genomes_project 17 61960319 61965989 - Mydgf protein_coding retained_intron MGP_NODShiLtJ_T0047945.1 MGP_NODShiLtJ_G0023739.1 mouse_genomes_project 17 61961525 61965804 - Mydgf protein_coding processed_transcript MGP_NODShiLtJ_T0048431.1 MGP_NODShiLtJ_G0023921.1 mouse_genomes_project 17 97583857 97596241 - MGP_NODShiLtJ_P0048431 Mcfd2 protein_coding protein_coding MGP_NODShiLtJ_T0048432.1 MGP_NODShiLtJ_G0023921.1 mouse_genomes_project 17 97583859 97596210 - MGP_NODShiLtJ_P0048432 Mcfd2 protein_coding protein_coding MGP_NODShiLtJ_T0048433.1 MGP_NODShiLtJ_G0023921.1 mouse_genomes_project 17 97584988 97596186 - MGP_NODShiLtJ_P0048433 Mcfd2 protein_coding protein_coding MGP_NODShiLtJ_T0048434.1 MGP_NODShiLtJ_G0023921.1 mouse_genomes_project 17 97585170 97596201 - MGP_NODShiLtJ_P0048434 Mcfd2 protein_coding protein_coding MGP_NODShiLtJ_T0048435.1 MGP_NODShiLtJ_G0023921.1 mouse_genomes_project 17 97585964 97596180 - MGP_NODShiLtJ_P0048435 Mcfd2 protein_coding protein_coding MGP_NODShiLtJ_T0048436.1 MGP_NODShiLtJ_G0023921.1 mouse_genomes_project 17 97586472 97596186 - MGP_NODShiLtJ_P0048436 Mcfd2 protein_coding protein_coding MGP_NODShiLtJ_T0048437.1 MGP_NODShiLtJ_G0023921.1 mouse_genomes_project 17 97588835 97596169 - Mcfd2 protein_coding processed_transcript MGP_NODShiLtJ_T0013128.1 MGP_NODShiLtJ_G0011236.1 mouse_genomes_project 17 38682623 38683616 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101743.1 MGP_NODShiLtJ_G0039911.1 mouse_genomes_project 17 38631057 38633165 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017427.1 MGP_NODShiLtJ_G0015220.1 mouse_genomes_project 17 36851964 36852960 - 1110038B12Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017428.1 MGP_NODShiLtJ_G0015220.1 mouse_genomes_project 17 36851967 36854372 - 1110038B12Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017429.1 MGP_NODShiLtJ_G0015220.1 mouse_genomes_project 17 36851967 36854364 - 1110038B12Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017430.1 MGP_NODShiLtJ_G0015220.1 mouse_genomes_project 17 36851967 36854387 - 1110038B12Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017431.1 MGP_NODShiLtJ_G0015220.1 mouse_genomes_project 17 36851968 36854350 - 1110038B12Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017432.1 MGP_NODShiLtJ_G0015220.1 mouse_genomes_project 17 36851969 36854384 - 1110038B12Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017433.1 MGP_NODShiLtJ_G0015220.1 mouse_genomes_project 17 36853312 36854384 - 1110038B12Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017434.1 MGP_NODShiLtJ_G0015220.1 mouse_genomes_project 17 36853460 36854378 - 1110038B12Rik processed_transcript retained_intron MGP_NODShiLtJ_T0047327.1 MGP_NODShiLtJ_G0023516.1 mouse_genomes_project 17 39242478 39246013 - MGP_NODShiLtJ_P0047327 2410137M14Rik protein_coding protein_coding MGP_NODShiLtJ_T0047328.1 MGP_NODShiLtJ_G0023516.1 mouse_genomes_project 17 39242615 39245993 - MGP_NODShiLtJ_P0047328 2410137M14Rik protein_coding protein_coding MGP_NODShiLtJ_T0046869.1 MGP_NODShiLtJ_G0023412.1 mouse_genomes_project 17 36711534 36713625 - MGP_NODShiLtJ_P0046869 Stk19 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046870.1 MGP_NODShiLtJ_G0023412.1 mouse_genomes_project 17 36711909 36726378 - MGP_NODShiLtJ_P0046870 Stk19 protein_coding protein_coding MGP_NODShiLtJ_T0046871.1 MGP_NODShiLtJ_G0023412.1 mouse_genomes_project 17 36711911 36715880 - Stk19 protein_coding retained_intron MGP_NODShiLtJ_T0046872.1 MGP_NODShiLtJ_G0023412.1 mouse_genomes_project 17 36711998 36725889 - MGP_NODShiLtJ_P0046872 Stk19 protein_coding protein_coding MGP_NODShiLtJ_T0046873.1 MGP_NODShiLtJ_G0023412.1 mouse_genomes_project 17 36721194 36726360 - Stk19 protein_coding retained_intron MGP_NODShiLtJ_T0046874.1 MGP_NODShiLtJ_G0023412.1 mouse_genomes_project 17 36721880 36726187 - Stk19 protein_coding retained_intron MGP_NODShiLtJ_T0048426.1 MGP_NODShiLtJ_G0023918.1 mouse_genomes_project 17 97308718 97338577 - MGP_NODShiLtJ_P0048426 Pigf protein_coding protein_coding MGP_NODShiLtJ_T0048002.1 MGP_NODShiLtJ_G0023757.1 mouse_genomes_project 17 62553242 62559729 + MGP_NODShiLtJ_P0048002 Ndufa11 protein_coding protein_coding MGP_NODShiLtJ_T0047717.1 MGP_NODShiLtJ_G0023669.1 mouse_genomes_project 17 51984439 52021771 + MGP_NODShiLtJ_P0047717 AI661453 protein_coding protein_coding MGP_NODShiLtJ_T0047718.1 MGP_NODShiLtJ_G0023669.1 mouse_genomes_project 17 51984629 52022265 + MGP_NODShiLtJ_P0047718 AI661453 protein_coding protein_coding MGP_NODShiLtJ_T0047853.1 MGP_NODShiLtJ_G0023702.1 mouse_genomes_project 17 54253411 54371342 - MGP_NODShiLtJ_P0047853 Daam2 protein_coding protein_coding MGP_NODShiLtJ_T0047854.1 MGP_NODShiLtJ_G0023702.1 mouse_genomes_project 17 54273973 54371326 - MGP_NODShiLtJ_P0047854 Daam2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047450.1 MGP_NODShiLtJ_G0023593.1 mouse_genomes_project 17 46743136 46771348 - MGP_NODShiLtJ_P0047450 Adgrf2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047451.1 MGP_NODShiLtJ_G0023593.1 mouse_genomes_project 17 46760812 46797219 - MGP_NODShiLtJ_P0047451 Adgrf2 protein_coding protein_coding MGP_NODShiLtJ_T0013090.1 MGP_NODShiLtJ_G0011198.1 mouse_genomes_project 17 10887050 10887795 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047112.1 MGP_NODShiLtJ_G0023467.1 mouse_genomes_project 17 37617053 37624912 - protein_coding processed_transcript MGP_NODShiLtJ_T0047895.1 MGP_NODShiLtJ_G0023714.1 mouse_genomes_project 17 58944666 58959245 - MGP_NODShiLtJ_P0047895 Sgol1 protein_coding protein_coding MGP_NODShiLtJ_T0047896.1 MGP_NODShiLtJ_G0023714.1 mouse_genomes_project 17 58957447 58959198 - Sgol1 protein_coding processed_transcript MGP_NODShiLtJ_T0047897.1 MGP_NODShiLtJ_G0023714.1 mouse_genomes_project 17 58957594 58959190 - Sgol1 protein_coding processed_transcript MGP_NODShiLtJ_T0046120.1 MGP_NODShiLtJ_G0023241.1 mouse_genomes_project 17 28520011 28526187 - MGP_NODShiLtJ_P0046120 Rps10 protein_coding protein_coding MGP_NODShiLtJ_T0046121.1 MGP_NODShiLtJ_G0023241.1 mouse_genomes_project 17 28520013 28530993 - MGP_NODShiLtJ_P0046121 Rps10 protein_coding protein_coding MGP_NODShiLtJ_T0046122.1 MGP_NODShiLtJ_G0023241.1 mouse_genomes_project 17 28520014 28526151 - MGP_NODShiLtJ_P0046122 Rps10 protein_coding protein_coding MGP_NODShiLtJ_T0046123.1 MGP_NODShiLtJ_G0023241.1 mouse_genomes_project 17 28520054 28525386 - MGP_NODShiLtJ_P0046123 Rps10 protein_coding protein_coding MGP_NODShiLtJ_T0046124.1 MGP_NODShiLtJ_G0023241.1 mouse_genomes_project 17 28520619 28526187 - Rps10 protein_coding processed_transcript MGP_NODShiLtJ_T0046125.1 MGP_NODShiLtJ_G0023241.1 mouse_genomes_project 17 28521251 28523855 - Rps10 protein_coding retained_intron MGP_NODShiLtJ_T0046126.1 MGP_NODShiLtJ_G0023241.1 mouse_genomes_project 17 28521547 28526140 - Rps10 protein_coding retained_intron MGP_NODShiLtJ_T0046127.1 MGP_NODShiLtJ_G0023241.1 mouse_genomes_project 17 28523744 28526155 - Rps10 protein_coding processed_transcript MGP_NODShiLtJ_T0046519.1 MGP_NODShiLtJ_G0023334.1 mouse_genomes_project 17 34433467 34457396 - MGP_NODShiLtJ_P0046519 Cyp4f13 protein_coding protein_coding MGP_NODShiLtJ_T0046520.1 MGP_NODShiLtJ_G0023334.1 mouse_genomes_project 17 34433480 34457373 - MGP_NODShiLtJ_P0046520 Cyp4f13 protein_coding protein_coding MGP_NODShiLtJ_T0046521.1 MGP_NODShiLtJ_G0023334.1 mouse_genomes_project 17 34433495 34457360 - MGP_NODShiLtJ_P0046521 Cyp4f13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046522.1 MGP_NODShiLtJ_G0023334.1 mouse_genomes_project 17 34434109 34434663 - Cyp4f13 protein_coding retained_intron MGP_NODShiLtJ_T0046523.1 MGP_NODShiLtJ_G0023334.1 mouse_genomes_project 17 34442545 34457396 - MGP_NODShiLtJ_P0046523 Cyp4f13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046524.1 MGP_NODShiLtJ_G0023334.1 mouse_genomes_project 17 34442757 34457354 - MGP_NODShiLtJ_P0046524 Cyp4f13 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046525.1 MGP_NODShiLtJ_G0023334.1 mouse_genomes_project 17 34449822 34457385 - Cyp4f13 protein_coding retained_intron MGP_NODShiLtJ_T0047235.1 MGP_NODShiLtJ_G0023484.1 mouse_genomes_project 17 38012761 38029217 - MGP_NODShiLtJ_P0047235 Prr3 protein_coding protein_coding MGP_NODShiLtJ_T0047236.1 MGP_NODShiLtJ_G0023484.1 mouse_genomes_project 17 38016510 38028703 - MGP_NODShiLtJ_P0047236 Prr3 protein_coding protein_coding MGP_NODShiLtJ_T0047237.1 MGP_NODShiLtJ_G0023484.1 mouse_genomes_project 17 38021140 38028625 - MGP_NODShiLtJ_P0047237 Prr3 protein_coding protein_coding MGP_NODShiLtJ_T0047238.1 MGP_NODShiLtJ_G0023484.1 mouse_genomes_project 17 38021376 38028985 - MGP_NODShiLtJ_P0047238 Prr3 protein_coding protein_coding MGP_NODShiLtJ_T0047239.1 MGP_NODShiLtJ_G0023484.1 mouse_genomes_project 17 38021544 38028985 - MGP_NODShiLtJ_P0047239 Prr3 protein_coding protein_coding MGP_NODShiLtJ_T0047240.1 MGP_NODShiLtJ_G0023484.1 mouse_genomes_project 17 38021799 38028856 - MGP_NODShiLtJ_P0047240 Prr3 protein_coding protein_coding MGP_NODShiLtJ_T0047241.1 MGP_NODShiLtJ_G0023484.1 mouse_genomes_project 17 38021910 38028476 - Prr3 protein_coding retained_intron MGP_NODShiLtJ_T0101692.1 MGP_NODShiLtJ_G0039861.1 mouse_genomes_project 17 19338574 19339480 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0000971.1 MGP_NODShiLtJ_G0000897.1 mouse_genomes_project 17 56944631 56948051 + TEC TEC MGP_NODShiLtJ_T0047807.1 MGP_NODShiLtJ_G0023691.1 mouse_genomes_project 17 53022357 53034436 + MGP_NODShiLtJ_P0047807 Treml2 protein_coding protein_coding MGP_NODShiLtJ_T0047734.1 MGP_NODShiLtJ_G0023672.1 mouse_genomes_project 17 52166815 52178868 - MGP_NODShiLtJ_P0047734 Bysl protein_coding protein_coding MGP_NODShiLtJ_T0046224.1 MGP_NODShiLtJ_G0023259.1 mouse_genomes_project 17 29534556 29544306 + MGP_NODShiLtJ_P0046224 Armc12 protein_coding protein_coding MGP_NODShiLtJ_T0048408.1 MGP_NODShiLtJ_G0023909.1 mouse_genomes_project 17 95808907 95820460 + MGP_NODShiLtJ_P0048408 Six3 protein_coding protein_coding MGP_NODShiLtJ_T0048409.1 MGP_NODShiLtJ_G0023909.1 mouse_genomes_project 17 95816111 95821428 + MGP_NODShiLtJ_P0048409 Six3 protein_coding protein_coding MGP_NODShiLtJ_T0048410.1 MGP_NODShiLtJ_G0023909.1 mouse_genomes_project 17 95816282 95824557 + MGP_NODShiLtJ_P0048410 Six3 protein_coding protein_coding MGP_NODShiLtJ_T0048131.1 MGP_NODShiLtJ_G0023810.1 mouse_genomes_project 17 74292220 74333571 - MGP_NODShiLtJ_P0048131 Themis3 protein_coding protein_coding MGP_NODShiLtJ_T0045845.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26240967 26328802 + MGP_NODShiLtJ_P0045845 Lmf1 protein_coding protein_coding MGP_NODShiLtJ_T0045846.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26240970 26328802 + MGP_NODShiLtJ_P0045846 Lmf1 protein_coding protein_coding MGP_NODShiLtJ_T0045847.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26240980 26261955 + Lmf1 protein_coding retained_intron MGP_NODShiLtJ_T0045848.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26240980 26328699 + MGP_NODShiLtJ_P0045848 Lmf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045849.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26240990 26319770 + MGP_NODShiLtJ_P0045849 Lmf1 protein_coding protein_coding MGP_NODShiLtJ_T0045850.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26240992 26252631 + Lmf1 protein_coding retained_intron MGP_NODShiLtJ_T0045851.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26240992 26299729 + Lmf1 protein_coding retained_intron MGP_NODShiLtJ_T0045852.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26240992 26312715 + Lmf1 protein_coding retained_intron MGP_NODShiLtJ_T0045853.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26241113 26295567 + Lmf1 protein_coding processed_transcript MGP_NODShiLtJ_T0045854.1 MGP_NODShiLtJ_G0023177.1 mouse_genomes_project 17 26320330 26321364 + MGP_NODShiLtJ_P0045854 Lmf1 protein_coding protein_coding MGP_NODShiLtJ_T0010108.1 MGP_NODShiLtJ_G0008241.1 mouse_genomes_project 17 37129312 37129390 + Mir6973a miRNA miRNA MGP_NODShiLtJ_T0046094.1 MGP_NODShiLtJ_G0023235.1 mouse_genomes_project 17 28027354 28042083 - MGP_NODShiLtJ_P0046094 Lemd2 protein_coding protein_coding MGP_NODShiLtJ_T0045899.1 MGP_NODShiLtJ_G0023191.1 mouse_genomes_project 17 26505060 26507786 - MGP_NODShiLtJ_P0045899 Stub1 protein_coding protein_coding MGP_NODShiLtJ_T0045749.1 MGP_NODShiLtJ_G0023152.1 mouse_genomes_project 17 25567653 25586679 - MGP_NODShiLtJ_P0045749 Hn1l protein_coding protein_coding MGP_NODShiLtJ_T0000974.1 MGP_NODShiLtJ_G0000900.1 mouse_genomes_project 17 79557110 79560736 - TEC TEC MGP_NODShiLtJ_T0003674.1 MGP_NODShiLtJ_G0003308.1 mouse_genomes_project 17 28526253 28531226 + antisense antisense MGP_NODShiLtJ_T0046309.1 MGP_NODShiLtJ_G0023279.1 mouse_genomes_project 17 30442275 30455317 + Pi16 protein_coding retained_intron MGP_NODShiLtJ_T0046310.1 MGP_NODShiLtJ_G0023279.1 mouse_genomes_project 17 30442595 30455324 + MGP_NODShiLtJ_P0046310 Pi16 protein_coding protein_coding MGP_NODShiLtJ_T0046311.1 MGP_NODShiLtJ_G0023279.1 mouse_genomes_project 17 30442613 30455330 + MGP_NODShiLtJ_P0046311 Pi16 protein_coding protein_coding MGP_NODShiLtJ_T0048332.1 MGP_NODShiLtJ_G0023875.1 mouse_genomes_project 17 89585877 89622875 - MGP_NODShiLtJ_P0048332 Hnrnpll protein_coding protein_coding MGP_NODShiLtJ_T0048333.1 MGP_NODShiLtJ_G0023875.1 mouse_genomes_project 17 89585877 89622768 - MGP_NODShiLtJ_P0048333 Hnrnpll protein_coding protein_coding MGP_NODShiLtJ_T0048334.1 MGP_NODShiLtJ_G0023875.1 mouse_genomes_project 17 89586136 89622768 - MGP_NODShiLtJ_P0048334 Hnrnpll protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048335.1 MGP_NODShiLtJ_G0023875.1 mouse_genomes_project 17 89586640 89591856 - Hnrnpll protein_coding retained_intron MGP_NODShiLtJ_T0048336.1 MGP_NODShiLtJ_G0023875.1 mouse_genomes_project 17 89593448 89622735 - Hnrnpll protein_coding retained_intron MGP_NODShiLtJ_T0048337.1 MGP_NODShiLtJ_G0023875.1 mouse_genomes_project 17 89603384 89622676 - Hnrnpll protein_coding retained_intron MGP_NODShiLtJ_T0048338.1 MGP_NODShiLtJ_G0023875.1 mouse_genomes_project 17 89609570 89622809 - Hnrnpll protein_coding retained_intron MGP_NODShiLtJ_T0047560.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50402374 50419339 - MGP_NODShiLtJ_P0047560 Vegfa protein_coding protein_coding MGP_NODShiLtJ_T0047561.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50402374 50418786 - MGP_NODShiLtJ_P0047561 Vegfa protein_coding protein_coding MGP_NODShiLtJ_T0047562.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50402377 50419347 - MGP_NODShiLtJ_P0047562 Vegfa protein_coding protein_coding MGP_NODShiLtJ_T0047563.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50403632 50410264 - Vegfa protein_coding retained_intron MGP_NODShiLtJ_T0047564.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50403922 50419339 - MGP_NODShiLtJ_P0047564 Vegfa protein_coding protein_coding MGP_NODShiLtJ_T0047565.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50403985 50410281 - Vegfa protein_coding retained_intron MGP_NODShiLtJ_T0047566.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50404091 50406756 - Vegfa protein_coding retained_intron MGP_NODShiLtJ_T0047567.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50404210 50418327 - MGP_NODShiLtJ_P0047567 Vegfa protein_coding protein_coding MGP_NODShiLtJ_T0047568.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50404212 50410201 - Vegfa protein_coding retained_intron MGP_NODShiLtJ_T0047569.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50404237 50418327 - MGP_NODShiLtJ_P0047569 Vegfa protein_coding protein_coding MGP_NODShiLtJ_T0047570.1 MGP_NODShiLtJ_G0023624.1 mouse_genomes_project 17 50410595 50418327 - Vegfa protein_coding retained_intron MGP_NODShiLtJ_T0013100.1 MGP_NODShiLtJ_G0011208.1 mouse_genomes_project 17 23021270 23021688 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047965.1 MGP_NODShiLtJ_G0023748.1 mouse_genomes_project 17 62313197 62314433 - MGP_NODShiLtJ_P0047965 Znrf4 protein_coding protein_coding MGP_NODShiLtJ_T0013111.1 MGP_NODShiLtJ_G0011219.1 mouse_genomes_project 17 33350415 33350835 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013135.1 MGP_NODShiLtJ_G0011243.1 mouse_genomes_project 17 40492619 40497113 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045252.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11006427 11008829 + Tcp1 protein_coding processed_transcript MGP_NODShiLtJ_T0045253.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11007166 11009094 + MGP_NODShiLtJ_P0045253 Tcp1 protein_coding protein_coding MGP_NODShiLtJ_T0045254.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11007176 11010943 + Tcp1 protein_coding retained_intron MGP_NODShiLtJ_T0045255.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11007176 11015239 + Tcp1 protein_coding retained_intron MGP_NODShiLtJ_T0045256.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11007202 11010273 + Tcp1 protein_coding retained_intron MGP_NODShiLtJ_T0045257.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11007293 11015183 + MGP_NODShiLtJ_P0045257 Tcp1 protein_coding protein_coding MGP_NODShiLtJ_T0045258.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11010387 11011355 + Tcp1 protein_coding retained_intron MGP_NODShiLtJ_T0045259.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11010831 11013439 + Tcp1 protein_coding retained_intron MGP_NODShiLtJ_T0045260.1 MGP_NODShiLtJ_G0022979.1 mouse_genomes_project 17 11010995 11011855 + Tcp1 protein_coding retained_intron MGP_NODShiLtJ_T0045099.1 MGP_NODShiLtJ_G0022930.1 mouse_genomes_project 17 582268 582928 + MGP_NODShiLtJ_P0045099 Cldn20 protein_coding protein_coding MGP_NODShiLtJ_T0099009.1 MGP_NODShiLtJ_G0037403.1 mouse_genomes_project 17 73759604 73759711 + Gm23264 snRNA snRNA MGP_NODShiLtJ_T0048359.1 MGP_NODShiLtJ_G0023890.1 mouse_genomes_project 17 91078049 91390506 - MGP_NODShiLtJ_P0048359 Slc8a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048360.1 MGP_NODShiLtJ_G0023890.1 mouse_genomes_project 17 91078049 91368161 - MGP_NODShiLtJ_P0048360 Slc8a1 protein_coding protein_coding MGP_NODShiLtJ_T0048361.1 MGP_NODShiLtJ_G0023890.1 mouse_genomes_project 17 91078049 91368161 - MGP_NODShiLtJ_P0048361 Slc8a1 protein_coding protein_coding MGP_NODShiLtJ_T0047905.1 MGP_NODShiLtJ_G0023719.1 mouse_genomes_project 17 61269618 61310344 - MGP_NODShiLtJ_P0047905 Vmn2r118 protein_coding protein_coding MGP_NODShiLtJ_T0047910.1 MGP_NODShiLtJ_G0023724.1 mouse_genomes_project 17 61719579 61723770 + MGP_NODShiLtJ_P0047910 Ebi3 protein_coding protein_coding MGP_NODShiLtJ_T0047030.1 MGP_NODShiLtJ_G0023443.1 mouse_genomes_project 17 37049454 37049992 + D17H6S53E protein_coding retained_intron MGP_NODShiLtJ_T0047031.1 MGP_NODShiLtJ_G0023443.1 mouse_genomes_project 17 37049467 37052601 + MGP_NODShiLtJ_P0047031 D17H6S53E protein_coding protein_coding MGP_NODShiLtJ_T0046856.1 MGP_NODShiLtJ_G0023407.1 mouse_genomes_project 17 36461845 36463406 + MGP_NODShiLtJ_P0046856 Fkbpl protein_coding protein_coding MGP_NODShiLtJ_T0046857.1 MGP_NODShiLtJ_G0023407.1 mouse_genomes_project 17 36461922 36462404 + MGP_NODShiLtJ_P0046857 Fkbpl protein_coding protein_coding MGP_NODShiLtJ_T0045426.1 MGP_NODShiLtJ_G0023054.1 mouse_genomes_project 17 21685716 21699028 + MGP_NODShiLtJ_P0045426 Zfp983 protein_coding protein_coding MGP_NODShiLtJ_T0045378.1 MGP_NODShiLtJ_G0023016.1 mouse_genomes_project 17 17091121 18435285 + MGP_NODShiLtJ_P0045378 protein_coding protein_coding MGP_NODShiLtJ_T0045379.1 MGP_NODShiLtJ_G0023016.1 mouse_genomes_project 17 17091948 18435285 + MGP_NODShiLtJ_P0045379 protein_coding protein_coding MGP_NODShiLtJ_T0046312.1 MGP_NODShiLtJ_G0023280.1 mouse_genomes_project 17 30458451 30475207 - MGP_NODShiLtJ_P0046312 Mtch1 protein_coding protein_coding MGP_NODShiLtJ_T0046313.1 MGP_NODShiLtJ_G0023280.1 mouse_genomes_project 17 30458455 30475207 - MGP_NODShiLtJ_P0046313 Mtch1 protein_coding protein_coding MGP_NODShiLtJ_T0046314.1 MGP_NODShiLtJ_G0023280.1 mouse_genomes_project 17 30458493 30460385 - Mtch1 protein_coding processed_transcript MGP_NODShiLtJ_T0046315.1 MGP_NODShiLtJ_G0023280.1 mouse_genomes_project 17 30460098 30460487 - Mtch1 protein_coding processed_transcript MGP_NODShiLtJ_T0046316.1 MGP_NODShiLtJ_G0023280.1 mouse_genomes_project 17 30461661 30467040 - Mtch1 protein_coding retained_intron MGP_NODShiLtJ_T0046317.1 MGP_NODShiLtJ_G0023280.1 mouse_genomes_project 17 30466418 30474475 - MGP_NODShiLtJ_P0046317 Mtch1 protein_coding protein_coding MGP_NODShiLtJ_T0046318.1 MGP_NODShiLtJ_G0023280.1 mouse_genomes_project 17 30467375 30469563 - Mtch1 protein_coding retained_intron MGP_NODShiLtJ_T0048294.1 MGP_NODShiLtJ_G0023856.1 mouse_genomes_project 17 87612448 87795090 + MGP_NODShiLtJ_P0048294 Crim1 protein_coding protein_coding MGP_NODShiLtJ_T0003697.1 MGP_NODShiLtJ_G0003323.1 mouse_genomes_project 17 36888681 36893595 - Gm10501 antisense antisense MGP_NODShiLtJ_T0099020.1 MGP_NODShiLtJ_G0037414.1 mouse_genomes_project 17 98889788 98889895 - Gm23947 snRNA snRNA MGP_NODShiLtJ_T0047446.1 MGP_NODShiLtJ_G0023592.1 mouse_genomes_project 17 46705364 46742174 - MGP_NODShiLtJ_P0047446 Adgrf4 protein_coding protein_coding MGP_NODShiLtJ_T0047447.1 MGP_NODShiLtJ_G0023592.1 mouse_genomes_project 17 46705367 46742174 - MGP_NODShiLtJ_P0047447 Adgrf4 protein_coding protein_coding MGP_NODShiLtJ_T0047448.1 MGP_NODShiLtJ_G0023592.1 mouse_genomes_project 17 46705564 46742152 - MGP_NODShiLtJ_P0047448 Adgrf4 protein_coding protein_coding MGP_NODShiLtJ_T0047449.1 MGP_NODShiLtJ_G0023592.1 mouse_genomes_project 17 46721731 46742163 - MGP_NODShiLtJ_P0047449 Adgrf4 protein_coding protein_coding MGP_NODShiLtJ_T0045761.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25727140 25743650 - Telo2 protein_coding retained_intron MGP_NODShiLtJ_T0045762.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25727140 25743710 - MGP_NODShiLtJ_P0045762 Telo2 protein_coding protein_coding MGP_NODShiLtJ_T0045763.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25727147 25743648 - MGP_NODShiLtJ_P0045763 Telo2 protein_coding protein_coding MGP_NODShiLtJ_T0045764.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25727187 25731233 - Telo2 protein_coding processed_transcript MGP_NODShiLtJ_T0045765.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25727195 25734411 - Telo2 protein_coding processed_transcript MGP_NODShiLtJ_T0045766.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25727395 25729016 - Telo2 protein_coding processed_transcript MGP_NODShiLtJ_T0045767.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25728346 25735726 - Telo2 protein_coding retained_intron MGP_NODShiLtJ_T0045768.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25738396 25742935 - Telo2 protein_coding processed_transcript MGP_NODShiLtJ_T0045769.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25738686 25741392 - Telo2 protein_coding processed_transcript MGP_NODShiLtJ_T0045770.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25740945 25743055 - Telo2 protein_coding processed_transcript MGP_NODShiLtJ_T0045771.1 MGP_NODShiLtJ_G0023156.1 mouse_genomes_project 17 25741880 25743697 - Telo2 protein_coding retained_intron MGP_NODShiLtJ_T0046922.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36798997 36815514 + MGP_NODShiLtJ_P0046922 Ehmt2 protein_coding protein_coding MGP_NODShiLtJ_T0046923.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36799027 36815510 + MGP_NODShiLtJ_P0046923 Ehmt2 protein_coding protein_coding MGP_NODShiLtJ_T0046924.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36799529 36815507 + MGP_NODShiLtJ_P0046924 Ehmt2 protein_coding protein_coding MGP_NODShiLtJ_T0046925.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36799546 36815514 + MGP_NODShiLtJ_P0046925 Ehmt2 protein_coding protein_coding MGP_NODShiLtJ_T0046926.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36800269 36804137 + Ehmt2 protein_coding processed_transcript MGP_NODShiLtJ_T0046927.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36806710 36807759 + Ehmt2 protein_coding retained_intron MGP_NODShiLtJ_T0046928.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36806747 36807548 + Ehmt2 protein_coding retained_intron MGP_NODShiLtJ_T0046929.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36807417 36808133 + Ehmt2 protein_coding retained_intron MGP_NODShiLtJ_T0046930.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36807509 36810066 + MGP_NODShiLtJ_P0046930 Ehmt2 protein_coding protein_coding MGP_NODShiLtJ_T0046931.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36808251 36809951 + Ehmt2 protein_coding processed_transcript MGP_NODShiLtJ_T0046932.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36808905 36815510 + MGP_NODShiLtJ_P0046932 Ehmt2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046933.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36808907 36810310 + MGP_NODShiLtJ_P0046933 Ehmt2 protein_coding protein_coding MGP_NODShiLtJ_T0046934.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36810152 36813006 + Ehmt2 protein_coding retained_intron MGP_NODShiLtJ_T0046935.1 MGP_NODShiLtJ_G0023420.1 mouse_genomes_project 17 36812478 36815515 + Ehmt2 protein_coding retained_intron MGP_NODShiLtJ_T0045452.1 MGP_NODShiLtJ_G0023070.1 mouse_genomes_project 17 23129714 23153099 - MGP_NODShiLtJ_P0045452 Zfp945 protein_coding protein_coding MGP_NODShiLtJ_T0045453.1 MGP_NODShiLtJ_G0023070.1 mouse_genomes_project 17 23132047 23147551 - Zfp945 protein_coding retained_intron MGP_NODShiLtJ_T0045454.1 MGP_NODShiLtJ_G0023070.1 mouse_genomes_project 17 23132047 23153099 - MGP_NODShiLtJ_P0045454 Zfp945 protein_coding protein_coding MGP_NODShiLtJ_T0045455.1 MGP_NODShiLtJ_G0023070.1 mouse_genomes_project 17 23136624 23153068 - MGP_NODShiLtJ_P0045455 Zfp945 protein_coding protein_coding MGP_NODShiLtJ_T0045456.1 MGP_NODShiLtJ_G0023070.1 mouse_genomes_project 17 23147560 23153099 - Zfp945 protein_coding retained_intron MGP_NODShiLtJ_T0017436.1 MGP_NODShiLtJ_G0015222.1 mouse_genomes_project 17 51656426 51863586 + Trerf1 processed_transcript retained_intron MGP_NODShiLtJ_T0017437.1 MGP_NODShiLtJ_G0015222.1 mouse_genomes_project 17 51656488 51899051 + Trerf1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017438.1 MGP_NODShiLtJ_G0015222.1 mouse_genomes_project 17 51656488 51895580 + Trerf1 processed_transcript processed_transcript MGP_NODShiLtJ_T0017439.1 MGP_NODShiLtJ_G0015222.1 mouse_genomes_project 17 51656762 51851766 + Trerf1 processed_transcript retained_intron MGP_NODShiLtJ_T0017440.1 MGP_NODShiLtJ_G0015222.1 mouse_genomes_project 17 51731408 51851766 + Trerf1 processed_transcript retained_intron MGP_NODShiLtJ_T0017441.1 MGP_NODShiLtJ_G0015222.1 mouse_genomes_project 17 51822115 51895585 + Trerf1 processed_transcript processed_transcript MGP_NODShiLtJ_T0046174.1 MGP_NODShiLtJ_G0023253.1 mouse_genomes_project 17 29184096 29254717 + protein_coding retained_intron MGP_NODShiLtJ_T0046175.1 MGP_NODShiLtJ_G0023253.1 mouse_genomes_project 17 29184112 29260090 + protein_coding processed_transcript MGP_NODShiLtJ_T0046176.1 MGP_NODShiLtJ_G0023253.1 mouse_genomes_project 17 29184137 29260168 + protein_coding retained_intron MGP_NODShiLtJ_T0046177.1 MGP_NODShiLtJ_G0023253.1 mouse_genomes_project 17 29228571 29230027 + protein_coding processed_transcript MGP_NODShiLtJ_T0046178.1 MGP_NODShiLtJ_G0023253.1 mouse_genomes_project 17 29229056 29258945 + MGP_NODShiLtJ_P0046178 protein_coding protein_coding MGP_NODShiLtJ_T0046179.1 MGP_NODShiLtJ_G0023253.1 mouse_genomes_project 17 29237037 29261713 + MGP_NODShiLtJ_P0046179 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101714.1 MGP_NODShiLtJ_G0039883.1 mouse_genomes_project 17 27016940 27017639 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047391.1 MGP_NODShiLtJ_G0023546.1 mouse_genomes_project 17 40036900 40054129 - MGP_NODShiLtJ_P0047391 Olfr126 protein_coding protein_coding MGP_NODShiLtJ_T0100242.1 MGP_NODShiLtJ_G0038636.1 mouse_genomes_project 17 10334786 10334926 + Gm24794 snoRNA snoRNA MGP_NODShiLtJ_T0003687.1 MGP_NODShiLtJ_G0003317.1 mouse_genomes_project 17 34308183 34322841 + Gm26693 antisense antisense MGP_NODShiLtJ_T0048003.1 MGP_NODShiLtJ_G0023758.1 mouse_genomes_project 17 62592500 62599840 - MGP_NODShiLtJ_P0048003 Nrtn protein_coding protein_coding MGP_NODShiLtJ_T0101301.1 MGP_NODShiLtJ_G0039563.1 mouse_genomes_project 17 79724765 79769551 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101302.1 MGP_NODShiLtJ_G0039563.1 mouse_genomes_project 17 79727005 79749295 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0013119.1 MGP_NODShiLtJ_G0011227.1 mouse_genomes_project 17 38284534 38285080 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048243.1 MGP_NODShiLtJ_G0023841.1 mouse_genomes_project 17 81911458 82141872 - MGP_NODShiLtJ_P0048243 Galnt14 protein_coding protein_coding MGP_NODShiLtJ_T0048244.1 MGP_NODShiLtJ_G0023841.1 mouse_genomes_project 17 81926104 82141836 - MGP_NODShiLtJ_P0048244 Galnt14 protein_coding protein_coding MGP_NODShiLtJ_T0048245.1 MGP_NODShiLtJ_G0023841.1 mouse_genomes_project 17 81993319 82141874 - Galnt14 protein_coding retained_intron MGP_NODShiLtJ_T0048136.1 MGP_NODShiLtJ_G0023814.1 mouse_genomes_project 17 75673360 75856216 - MGP_NODShiLtJ_P0048136 Arhgap28 protein_coding protein_coding MGP_NODShiLtJ_T0048137.1 MGP_NODShiLtJ_G0023814.1 mouse_genomes_project 17 75676382 75743657 - MGP_NODShiLtJ_P0048137 Arhgap28 protein_coding protein_coding MGP_NODShiLtJ_T0048138.1 MGP_NODShiLtJ_G0023814.1 mouse_genomes_project 17 75688630 75706630 - MGP_NODShiLtJ_P0048138 Arhgap28 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048139.1 MGP_NODShiLtJ_G0023814.1 mouse_genomes_project 17 75701089 75735285 - MGP_NODShiLtJ_P0048139 Arhgap28 protein_coding protein_coding MGP_NODShiLtJ_T0047746.1 MGP_NODShiLtJ_G0023676.1 mouse_genomes_project 17 52262046 52263585 - MGP_NODShiLtJ_P0047746 Tomm6 protein_coding protein_coding MGP_NODShiLtJ_T0047748.1 MGP_NODShiLtJ_G0023676.1 mouse_genomes_project 17 52262140 52263788 - Tomm6 protein_coding retained_intron MGP_NODShiLtJ_T0047749.1 MGP_NODShiLtJ_G0023676.1 mouse_genomes_project 17 52262140 52263470 - MGP_NODShiLtJ_P0047749 Tomm6 protein_coding protein_coding MGP_NODShiLtJ_T0100256.1 MGP_NODShiLtJ_G0038650.1 mouse_genomes_project 17 37183418 37183494 + Gm25128 snoRNA snoRNA MGP_NODShiLtJ_T0047284.1 MGP_NODShiLtJ_G0023499.1 mouse_genomes_project 17 38521494 38526676 - MGP_NODShiLtJ_P0047284 H2-M10.1 protein_coding protein_coding MGP_NODShiLtJ_T0047285.1 MGP_NODShiLtJ_G0023499.1 mouse_genomes_project 17 38521837 38526702 - MGP_NODShiLtJ_P0047285 H2-M10.1 protein_coding protein_coding MGP_NODShiLtJ_T0045273.1 MGP_NODShiLtJ_G0022985.1 mouse_genomes_project 17 11418223 11419641 + MGP_NODShiLtJ_P0045273 protein_coding protein_coding MGP_NODShiLtJ_T0047608.1 MGP_NODShiLtJ_G0023632.1 mouse_genomes_project 17 50673301 50677683 + MGP_NODShiLtJ_P0047608 Yipf3 protein_coding protein_coding MGP_NODShiLtJ_T0047609.1 MGP_NODShiLtJ_G0023632.1 mouse_genomes_project 17 50673346 50676687 + MGP_NODShiLtJ_P0047609 Yipf3 protein_coding protein_coding MGP_NODShiLtJ_T0047610.1 MGP_NODShiLtJ_G0023632.1 mouse_genomes_project 17 50673366 50677200 + Yipf3 protein_coding retained_intron MGP_NODShiLtJ_T0047611.1 MGP_NODShiLtJ_G0023632.1 mouse_genomes_project 17 50674247 50677103 + MGP_NODShiLtJ_P0047611 Yipf3 protein_coding protein_coding MGP_NODShiLtJ_T0047612.1 MGP_NODShiLtJ_G0023632.1 mouse_genomes_project 17 50675304 50676203 + Yipf3 protein_coding processed_transcript MGP_NODShiLtJ_T0047613.1 MGP_NODShiLtJ_G0023632.1 mouse_genomes_project 17 50676539 50677216 + Yipf3 protein_coding processed_transcript MGP_NODShiLtJ_T0101698.1 MGP_NODShiLtJ_G0039867.1 mouse_genomes_project 17 20270355 20271207 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046545.1 MGP_NODShiLtJ_G0023347.1 mouse_genomes_project 17 34971296 35005747 - Zfp101 protein_coding processed_transcript MGP_NODShiLtJ_T0046546.1 MGP_NODShiLtJ_G0023347.1 mouse_genomes_project 17 34983385 35006010 - MGP_NODShiLtJ_P0046546 Zfp101 protein_coding protein_coding MGP_NODShiLtJ_T0046547.1 MGP_NODShiLtJ_G0023347.1 mouse_genomes_project 17 34985484 35005726 - MGP_NODShiLtJ_P0046547 Zfp101 protein_coding protein_coding MGP_NODShiLtJ_T0046548.1 MGP_NODShiLtJ_G0023347.1 mouse_genomes_project 17 34986194 35005992 - MGP_NODShiLtJ_P0046548 Zfp101 protein_coding protein_coding MGP_NODShiLtJ_T0046549.1 MGP_NODShiLtJ_G0023347.1 mouse_genomes_project 17 34988762 35005974 - Zfp101 protein_coding processed_transcript MGP_NODShiLtJ_T0047864.1 MGP_NODShiLtJ_G0023705.1 mouse_genomes_project 17 55129478 55159723 - MGP_NODShiLtJ_P0047864 Dazl protein_coding protein_coding MGP_NODShiLtJ_T0047865.1 MGP_NODShiLtJ_G0023705.1 mouse_genomes_project 17 55129613 55159073 - MGP_NODShiLtJ_P0047865 Dazl protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047690.1 MGP_NODShiLtJ_G0023657.1 mouse_genomes_project 17 51247298 51248071 + MGP_NODShiLtJ_P0047690 2310039H08Rik protein_coding protein_coding MGP_NODShiLtJ_T0097783.1 MGP_NODShiLtJ_G0036195.1 mouse_genomes_project 17 101147042 101147655 + pseudogene pseudogene MGP_NODShiLtJ_T0101740.1 MGP_NODShiLtJ_G0039908.1 mouse_genomes_project 17 38394314 38395231 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003735.1 MGP_NODShiLtJ_G0003354.1 mouse_genomes_project 17 97661774 97664063 - Gm15978 antisense antisense MGP_NODShiLtJ_T0048346.1 MGP_NODShiLtJ_G0023880.1 mouse_genomes_project 17 89819017 89873308 - MGP_NODShiLtJ_P0048346 Dhx57 protein_coding protein_coding MGP_NODShiLtJ_T0048347.1 MGP_NODShiLtJ_G0023880.1 mouse_genomes_project 17 89819017 89873308 - MGP_NODShiLtJ_P0048347 Dhx57 protein_coding protein_coding MGP_NODShiLtJ_T0048363.1 MGP_NODShiLtJ_G0023892.1 mouse_genomes_project 17 93193776 93204911 + MGP_NODShiLtJ_P0048363 Pkdcc protein_coding protein_coding MGP_NODShiLtJ_T0048364.1 MGP_NODShiLtJ_G0023892.1 mouse_genomes_project 17 93198539 93200179 + Pkdcc protein_coding processed_transcript MGP_NODShiLtJ_T0048365.1 MGP_NODShiLtJ_G0023892.1 mouse_genomes_project 17 93198539 93204105 + MGP_NODShiLtJ_P0048365 Pkdcc protein_coding protein_coding MGP_NODShiLtJ_T0048366.1 MGP_NODShiLtJ_G0023892.1 mouse_genomes_project 17 93199471 93204416 + Pkdcc protein_coding processed_transcript MGP_NODShiLtJ_T0045399.1 MGP_NODShiLtJ_G0023036.1 mouse_genomes_project 17 20716315 20717758 - MGP_NODShiLtJ_P0045399 Vmn1r228 protein_coding protein_coding MGP_NODShiLtJ_T0017407.1 MGP_NODShiLtJ_G0015208.1 mouse_genomes_project 17 20675131 20676158 + Vmn1r227 processed_transcript pseudogene MGP_NODShiLtJ_T0045417.1 MGP_NODShiLtJ_G0023048.1 mouse_genomes_project 17 21386598 21404274 + MGP_NODShiLtJ_P0045417 Zfp677 protein_coding protein_coding MGP_NODShiLtJ_T0045418.1 MGP_NODShiLtJ_G0023048.1 mouse_genomes_project 17 21386598 21404271 + MGP_NODShiLtJ_P0045418 Zfp677 protein_coding protein_coding MGP_NODShiLtJ_T0045492.1 MGP_NODShiLtJ_G0023082.1 mouse_genomes_project 17 24145201 24147207 - MGP_NODShiLtJ_P0045492 Tnfrsf12a protein_coding protein_coding MGP_NODShiLtJ_T0045493.1 MGP_NODShiLtJ_G0023082.1 mouse_genomes_project 17 24145201 24147207 - MGP_NODShiLtJ_P0045493 Tnfrsf12a protein_coding protein_coding MGP_NODShiLtJ_T0100270.1 MGP_NODShiLtJ_G0038664.1 mouse_genomes_project 17 93249504 93249639 + Gm24240 snoRNA snoRNA MGP_NODShiLtJ_T0046342.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30821376 30869054 + MGP_NODShiLtJ_P0046342 Cmtr1 protein_coding protein_coding MGP_NODShiLtJ_T0046343.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30821588 30837346 + MGP_NODShiLtJ_P0046343 Cmtr1 protein_coding protein_coding MGP_NODShiLtJ_T0046344.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30841913 30853431 + Cmtr1 protein_coding retained_intron MGP_NODShiLtJ_T0046345.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30842295 30845213 + MGP_NODShiLtJ_P0046345 Cmtr1 protein_coding protein_coding MGP_NODShiLtJ_T0046346.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30843493 30853017 + Cmtr1 protein_coding processed_transcript MGP_NODShiLtJ_T0046347.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30844223 30848976 + Cmtr1 protein_coding processed_transcript MGP_NODShiLtJ_T0046348.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30845196 30853121 + Cmtr1 protein_coding retained_intron MGP_NODShiLtJ_T0046349.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30848842 30853103 + Cmtr1 protein_coding retained_intron MGP_NODShiLtJ_T0046350.1 MGP_NODShiLtJ_G0023288.1 mouse_genomes_project 17 30850111 30866433 + Cmtr1 protein_coding retained_intron MGP_NODShiLtJ_T0048061.1 MGP_NODShiLtJ_G0023789.1 mouse_genomes_project 17 65057923 65071559 - MGP_NODShiLtJ_P0048061 Nudt12 protein_coding protein_coding MGP_NODShiLtJ_T0048062.1 MGP_NODShiLtJ_G0023789.1 mouse_genomes_project 17 65058418 65061878 - Nudt12 protein_coding retained_intron MGP_NODShiLtJ_T0048063.1 MGP_NODShiLtJ_G0023789.1 mouse_genomes_project 17 65064581 65071455 - MGP_NODShiLtJ_P0048063 Nudt12 protein_coding protein_coding MGP_NODShiLtJ_T0048013.1 MGP_NODShiLtJ_G0023765.1 mouse_genomes_project 17 62803813 62835135 - MGP_NODShiLtJ_P0048013 Acer1 protein_coding protein_coding MGP_NODShiLtJ_T0006831.1 MGP_NODShiLtJ_G0005618.1 mouse_genomes_project 17 4228817 4259463 - Gm2885 lincRNA lincRNA MGP_NODShiLtJ_T0003714.1 MGP_NODShiLtJ_G0003337.1 mouse_genomes_project 17 48987335 48989104 + Runx2os1 antisense antisense MGP_NODShiLtJ_T0048114.1 MGP_NODShiLtJ_G0023807.1 mouse_genomes_project 17 73802178 73833070 + MGP_NODShiLtJ_P0048114 Ddx11 protein_coding protein_coding MGP_NODShiLtJ_T0048115.1 MGP_NODShiLtJ_G0023807.1 mouse_genomes_project 17 73802338 73831744 + MGP_NODShiLtJ_P0048115 Ddx11 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048009.1 MGP_NODShiLtJ_G0023762.1 mouse_genomes_project 17 62692021 62723865 - MGP_NODShiLtJ_P0048009 Acsbg2 protein_coding protein_coding MGP_NODShiLtJ_T0047885.1 MGP_NODShiLtJ_G0023710.1 mouse_genomes_project 17 58622173 58693779 - MGP_NODShiLtJ_P0047885 Efhb protein_coding protein_coding MGP_NODShiLtJ_T0048384.1 MGP_NODShiLtJ_G0023898.1 mouse_genomes_project 17 94279204 94283224 - MGP_NODShiLtJ_P0048384 Zfp36l2 protein_coding protein_coding MGP_NODShiLtJ_T0045663.1 MGP_NODShiLtJ_G0023132.1 mouse_genomes_project 17 25292875 25298720 - MGP_NODShiLtJ_P0045663 Syngr3 protein_coding protein_coding MGP_NODShiLtJ_T0045664.1 MGP_NODShiLtJ_G0023132.1 mouse_genomes_project 17 25294418 25296821 - Syngr3 protein_coding processed_transcript MGP_NODShiLtJ_T0046563.1 MGP_NODShiLtJ_G0023350.1 mouse_genomes_project 17 35173865 35233954 + MGP_NODShiLtJ_P0046563 Myo1f protein_coding protein_coding MGP_NODShiLtJ_T0046564.1 MGP_NODShiLtJ_G0023350.1 mouse_genomes_project 17 35173891 35233950 + MGP_NODShiLtJ_P0046564 Myo1f protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046565.1 MGP_NODShiLtJ_G0023350.1 mouse_genomes_project 17 35173911 35197064 + MGP_NODShiLtJ_P0046565 Myo1f protein_coding protein_coding MGP_NODShiLtJ_T0046566.1 MGP_NODShiLtJ_G0023350.1 mouse_genomes_project 17 35204562 35233956 + Myo1f protein_coding retained_intron MGP_NODShiLtJ_T0047244.1 MGP_NODShiLtJ_G0023486.1 mouse_genomes_project 17 38062390 38069353 - MGP_NODShiLtJ_P0047244 H2-T24 protein_coding protein_coding MGP_NODShiLtJ_T0047245.1 MGP_NODShiLtJ_G0023486.1 mouse_genomes_project 17 38062964 38069318 - MGP_NODShiLtJ_P0047245 H2-T24 protein_coding protein_coding MGP_NODShiLtJ_T0046778.1 MGP_NODShiLtJ_G0023392.1 mouse_genomes_project 17 36057480 36073404 + MGP_NODShiLtJ_P0046778 H2-Eb2 protein_coding protein_coding MGP_NODShiLtJ_T0017446.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95795163 95810636 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017447.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95796446 95813654 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017448.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95802652 95813647 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017449.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95803219 95813680 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017450.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95804844 95813622 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017451.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95805786 95813557 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017452.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95806531 95813667 - Six3os1 processed_transcript retained_intron MGP_NODShiLtJ_T0017453.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95806916 95813503 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017454.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95806916 95813505 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017455.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95808169 95813557 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017456.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95808497 95811534 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017457.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95808980 95813355 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0017458.1 MGP_NODShiLtJ_G0015225.1 mouse_genomes_project 17 95808981 95813640 - Six3os1 processed_transcript antisense MGP_NODShiLtJ_T0046263.1 MGP_NODShiLtJ_G0023271.1 mouse_genomes_project 17 30026989 30039181 + MGP_NODShiLtJ_P0046263 Kctd20 protein_coding protein_coding MGP_NODShiLtJ_T0046264.1 MGP_NODShiLtJ_G0023271.1 mouse_genomes_project 17 30027475 30044589 + MGP_NODShiLtJ_P0046264 Kctd20 protein_coding protein_coding MGP_NODShiLtJ_T0046265.1 MGP_NODShiLtJ_G0023271.1 mouse_genomes_project 17 30027505 30042986 + MGP_NODShiLtJ_P0046265 Kctd20 protein_coding protein_coding MGP_NODShiLtJ_T0046266.1 MGP_NODShiLtJ_G0023271.1 mouse_genomes_project 17 30027542 30042149 + Kctd20 protein_coding processed_transcript MGP_NODShiLtJ_T0046267.1 MGP_NODShiLtJ_G0023271.1 mouse_genomes_project 17 30027638 30042986 + MGP_NODShiLtJ_P0046267 Kctd20 protein_coding protein_coding MGP_NODShiLtJ_T0046268.1 MGP_NODShiLtJ_G0023271.1 mouse_genomes_project 17 30027727 30040134 + MGP_NODShiLtJ_P0046268 Kctd20 protein_coding protein_coding MGP_NODShiLtJ_T0046269.1 MGP_NODShiLtJ_G0023271.1 mouse_genomes_project 17 30028255 30042994 + MGP_NODShiLtJ_P0046269 Kctd20 protein_coding protein_coding MGP_NODShiLtJ_T0046270.1 MGP_NODShiLtJ_G0023271.1 mouse_genomes_project 17 30028255 30042992 + MGP_NODShiLtJ_P0046270 Kctd20 protein_coding protein_coding MGP_NODShiLtJ_T0047276.1 MGP_NODShiLtJ_G0023497.1 mouse_genomes_project 17 38449682 38459830 - MGP_NODShiLtJ_P0047276 Trim39 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047277.1 MGP_NODShiLtJ_G0023497.1 mouse_genomes_project 17 38449682 38463082 - MGP_NODShiLtJ_P0047277 Trim39 protein_coding protein_coding MGP_NODShiLtJ_T0047278.1 MGP_NODShiLtJ_G0023497.1 mouse_genomes_project 17 38449682 38462645 - MGP_NODShiLtJ_P0047278 Trim39 protein_coding protein_coding MGP_NODShiLtJ_T0047279.1 MGP_NODShiLtJ_G0023497.1 mouse_genomes_project 17 38449919 38460298 - MGP_NODShiLtJ_P0047279 Trim39 protein_coding protein_coding MGP_NODShiLtJ_T0047280.1 MGP_NODShiLtJ_G0023497.1 mouse_genomes_project 17 38452341 38459773 - Trim39 protein_coding processed_transcript MGP_NODShiLtJ_T0047281.1 MGP_NODShiLtJ_G0023497.1 mouse_genomes_project 17 38453414 38462461 - Trim39 protein_coding processed_transcript MGP_NODShiLtJ_T0047282.1 MGP_NODShiLtJ_G0023497.1 mouse_genomes_project 17 38453416 38463325 - Trim39 protein_coding retained_intron MGP_NODShiLtJ_T0048014.1 MGP_NODShiLtJ_G0023766.1 mouse_genomes_project 17 62843217 62849296 + MGP_NODShiLtJ_P0048014 Clpp protein_coding protein_coding MGP_NODShiLtJ_T0101713.1 MGP_NODShiLtJ_G0039882.1 mouse_genomes_project 17 23601834 23631446 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047400.1 MGP_NODShiLtJ_G0023555.1 mouse_genomes_project 17 40366636 40367754 + MGP_NODShiLtJ_P0047400 Olfr125 protein_coding protein_coding MGP_NODShiLtJ_T0013166.1 MGP_NODShiLtJ_G0011274.1 mouse_genomes_project 17 76252420 76252951 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046773.1 MGP_NODShiLtJ_G0023390.1 mouse_genomes_project 17 36009500 36014609 - MGP_NODShiLtJ_P0046773 H2-Aa protein_coding protein_coding MGP_NODShiLtJ_T0046774.1 MGP_NODShiLtJ_G0023390.1 mouse_genomes_project 17 36009521 36014573 - MGP_NODShiLtJ_P0046774 H2-Aa protein_coding protein_coding MGP_NODShiLtJ_T0046775.1 MGP_NODShiLtJ_G0023390.1 mouse_genomes_project 17 36010527 36014559 - H2-Aa protein_coding retained_intron MGP_NODShiLtJ_T0046776.1 MGP_NODShiLtJ_G0023390.1 mouse_genomes_project 17 36013254 36014601 - H2-Aa protein_coding processed_transcript MGP_NODShiLtJ_T0013122.1 MGP_NODShiLtJ_G0011230.1 mouse_genomes_project 17 38412510 38412550 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048167.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78975231 78982231 - MGP_NODShiLtJ_P0048167 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048168.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78975231 78980815 - MGP_NODShiLtJ_P0048168 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048169.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78975237 78986278 - MGP_NODShiLtJ_P0048169 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048170.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78975237 78982093 - MGP_NODShiLtJ_P0048170 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048171.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78975237 78984474 - MGP_NODShiLtJ_P0048171 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048172.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78975754 78980815 - MGP_NODShiLtJ_P0048172 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048173.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78975895 78977353 - MGP_NODShiLtJ_P0048173 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048174.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78976007 78978197 - MGP_NODShiLtJ_P0048174 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048175.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78977207 78980669 - MGP_NODShiLtJ_P0048175 Tgif1 protein_coding protein_coding MGP_NODShiLtJ_T0048176.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78977321 78982155 - Tgif1 protein_coding processed_transcript MGP_NODShiLtJ_T0048177.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78977696 78980839 - Tgif1 protein_coding retained_intron MGP_NODShiLtJ_T0048178.1 MGP_NODShiLtJ_G0023821.1 mouse_genomes_project 17 78979398 78980832 - Tgif1 protein_coding processed_transcript MGP_NODShiLtJ_T0003648.1 MGP_NODShiLtJ_G0003294.1 mouse_genomes_project 17 5530610 5590933 - antisense antisense MGP_NODShiLtJ_T0003649.1 MGP_NODShiLtJ_G0003294.1 mouse_genomes_project 17 5575876 5590396 - antisense antisense MGP_NODShiLtJ_T0003650.1 MGP_NODShiLtJ_G0003294.1 mouse_genomes_project 17 5579275 5590859 - antisense antisense MGP_NODShiLtJ_T0047887.1 MGP_NODShiLtJ_G0023712.1 mouse_genomes_project 17 58743215 58780800 - MGP_NODShiLtJ_P0047887 Pp2d1 protein_coding protein_coding MGP_NODShiLtJ_T0046329.1 MGP_NODShiLtJ_G0023284.1 mouse_genomes_project 17 30676960 30702471 - MGP_NODShiLtJ_P0046329 Tmem217 protein_coding protein_coding MGP_NODShiLtJ_T0046330.1 MGP_NODShiLtJ_G0023284.1 mouse_genomes_project 17 30676960 30702471 - MGP_NODShiLtJ_P0046330 Tmem217 protein_coding protein_coding MGP_NODShiLtJ_T0047866.1 MGP_NODShiLtJ_G0023706.1 mouse_genomes_project 17 55399812 55586562 + MGP_NODShiLtJ_P0047866 Plcl2 protein_coding protein_coding MGP_NODShiLtJ_T0047317.1 MGP_NODShiLtJ_G0023513.1 mouse_genomes_project 17 39211755 39215112 - MGP_NODShiLtJ_P0047317 Ppp1r11 protein_coding protein_coding MGP_NODShiLtJ_T0047318.1 MGP_NODShiLtJ_G0023513.1 mouse_genomes_project 17 39212688 39215140 - MGP_NODShiLtJ_P0047318 Ppp1r11 protein_coding protein_coding MGP_NODShiLtJ_T0047319.1 MGP_NODShiLtJ_G0023513.1 mouse_genomes_project 17 39212753 39214737 - MGP_NODShiLtJ_P0047319 Ppp1r11 protein_coding protein_coding MGP_NODShiLtJ_T0047439.1 MGP_NODShiLtJ_G0023586.1 mouse_genomes_project 17 44521702 44526779 - MGP_NODShiLtJ_P0047439 9130008F23Rik protein_coding protein_coding MGP_NODShiLtJ_T0010093.1 MGP_NODShiLtJ_G0008226.1 mouse_genomes_project 17 28177634 28177695 - Mir7214 miRNA miRNA MGP_NODShiLtJ_T0045404.1 MGP_NODShiLtJ_G0023041.1 mouse_genomes_project 17 20897566 20918158 + MGP_NODShiLtJ_P0045404 Ppp2r1a protein_coding protein_coding MGP_NODShiLtJ_T0045405.1 MGP_NODShiLtJ_G0023041.1 mouse_genomes_project 17 20897742 20911026 + MGP_NODShiLtJ_P0045405 Ppp2r1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045406.1 MGP_NODShiLtJ_G0023041.1 mouse_genomes_project 17 20908818 20911079 + Ppp2r1a protein_coding retained_intron MGP_NODShiLtJ_T0045407.1 MGP_NODShiLtJ_G0023041.1 mouse_genomes_project 17 20909019 20911751 + MGP_NODShiLtJ_P0045407 Ppp2r1a protein_coding protein_coding MGP_NODShiLtJ_T0045408.1 MGP_NODShiLtJ_G0023041.1 mouse_genomes_project 17 20910982 20912840 + Ppp2r1a protein_coding retained_intron MGP_NODShiLtJ_T0045409.1 MGP_NODShiLtJ_G0023041.1 mouse_genomes_project 17 20911230 20914184 + Ppp2r1a protein_coding retained_intron MGP_NODShiLtJ_T0045410.1 MGP_NODShiLtJ_G0023041.1 mouse_genomes_project 17 20912731 20913508 + Ppp2r1a protein_coding retained_intron MGP_NODShiLtJ_T0047069.1 MGP_NODShiLtJ_G0023452.1 mouse_genomes_project 17 37156434 37172044 - MGP_NODShiLtJ_P0047069 Nfkbil1 protein_coding protein_coding MGP_NODShiLtJ_T0047071.1 MGP_NODShiLtJ_G0023452.1 mouse_genomes_project 17 37157095 37157917 - Nfkbil1 protein_coding processed_transcript MGP_NODShiLtJ_T0046201.1 MGP_NODShiLtJ_G0023256.1 mouse_genomes_project 17 29306073 29325398 - MGP_NODShiLtJ_P0046201 Tead3 protein_coding protein_coding MGP_NODShiLtJ_T0046202.1 MGP_NODShiLtJ_G0023256.1 mouse_genomes_project 17 29306116 29325461 - Tead3 protein_coding retained_intron MGP_NODShiLtJ_T0046203.1 MGP_NODShiLtJ_G0023256.1 mouse_genomes_project 17 29307117 29318180 - MGP_NODShiLtJ_P0046203 Tead3 protein_coding protein_coding MGP_NODShiLtJ_T0046204.1 MGP_NODShiLtJ_G0023256.1 mouse_genomes_project 17 29307903 29309787 - Tead3 protein_coding retained_intron MGP_NODShiLtJ_T0046205.1 MGP_NODShiLtJ_G0023256.1 mouse_genomes_project 17 29308320 29310724 - Tead3 protein_coding processed_transcript MGP_NODShiLtJ_T0101691.1 MGP_NODShiLtJ_G0039860.1 mouse_genomes_project 17 18987793 18988991 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047900.1 MGP_NODShiLtJ_G0023717.1 mouse_genomes_project 17 59653128 59681736 - MGP_NODShiLtJ_P0047900 Slc5a7 protein_coding protein_coding MGP_NODShiLtJ_T0046723.1 MGP_NODShiLtJ_G0023378.1 mouse_genomes_project 17 35809626 35812520 + MGP_NODShiLtJ_P0046723 H2-Oa protein_coding protein_coding MGP_NODShiLtJ_T0046724.1 MGP_NODShiLtJ_G0023378.1 mouse_genomes_project 17 35809708 35812519 + H2-Oa protein_coding retained_intron MGP_NODShiLtJ_T0047998.1 MGP_NODShiLtJ_G0023754.1 mouse_genomes_project 17 62455490 62493981 + MGP_NODShiLtJ_P0047998 Catsperd protein_coding protein_coding MGP_NODShiLtJ_T0011329.1 MGP_NODShiLtJ_G0009462.1 mouse_genomes_project 17 95810247 95810570 + Gm27283 misc_RNA misc_RNA MGP_NODShiLtJ_T0006928.1 MGP_NODShiLtJ_G0005692.1 mouse_genomes_project 17 97139286 97139973 + Gm29168 lincRNA lincRNA MGP_NODShiLtJ_T0048145.1 MGP_NODShiLtJ_G0023817.1 mouse_genomes_project 17 77095868 77246614 + MGP_NODShiLtJ_P0048145 Epb41l3 protein_coding protein_coding MGP_NODShiLtJ_T0048146.1 MGP_NODShiLtJ_G0023817.1 mouse_genomes_project 17 77095868 77246614 + MGP_NODShiLtJ_P0048146 Epb41l3 protein_coding protein_coding MGP_NODShiLtJ_T0048147.1 MGP_NODShiLtJ_G0023817.1 mouse_genomes_project 17 77160638 77246620 + MGP_NODShiLtJ_P0048147 Epb41l3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047283.1 MGP_NODShiLtJ_G0023498.1 mouse_genomes_project 17 38476919 38479847 - MGP_NODShiLtJ_P0047283 H2-M10.2 protein_coding protein_coding MGP_NODShiLtJ_T0048036.1 MGP_NODShiLtJ_G0023776.1 mouse_genomes_project 17 62965674 62981939 - MGP_NODShiLtJ_P0048036 protein_coding protein_coding MGP_NODShiLtJ_T0047701.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51907004 51918159 + MGP_NODShiLtJ_P0047701 Mrps10 protein_coding protein_coding MGP_NODShiLtJ_T0047702.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51907009 51914057 + Mrps10 protein_coding retained_intron MGP_NODShiLtJ_T0047703.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51907010 51913179 + MGP_NODShiLtJ_P0047703 Mrps10 protein_coding protein_coding MGP_NODShiLtJ_T0047704.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51907015 51914101 + Mrps10 protein_coding retained_intron MGP_NODShiLtJ_T0047705.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51907024 51916420 + MGP_NODShiLtJ_P0047705 Mrps10 protein_coding protein_coding MGP_NODShiLtJ_T0047706.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51908248 51915935 + Mrps10 protein_coding retained_intron MGP_NODShiLtJ_T0047707.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51909857 51915955 + Mrps10 protein_coding processed_transcript MGP_NODShiLtJ_T0047708.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51910612 51911475 + Mrps10 protein_coding retained_intron MGP_NODShiLtJ_T0047709.1 MGP_NODShiLtJ_G0023665.1 mouse_genomes_project 17 51913584 51920825 + Mrps10 protein_coding retained_intron MGP_NODShiLtJ_T0048112.1 MGP_NODShiLtJ_G0023806.1 mouse_genomes_project 17 73789078 73799162 + MGP_NODShiLtJ_P0048112 Wash1 protein_coding protein_coding MGP_NODShiLtJ_T0048113.1 MGP_NODShiLtJ_G0023806.1 mouse_genomes_project 17 73789177 73799162 + MGP_NODShiLtJ_P0048113 Wash1 protein_coding protein_coding MGP_NODShiLtJ_T0048150.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78001628 78950420 + MGP_NODShiLtJ_P0048150 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048151.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78001801 78948765 + MGP_NODShiLtJ_P0048151 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048152.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78001923 78603972 + Dlgap1 protein_coding retained_intron MGP_NODShiLtJ_T0048153.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78001923 78117219 + Dlgap1 protein_coding retained_intron MGP_NODShiLtJ_T0048154.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78001928 78769076 + Dlgap1 protein_coding retained_intron MGP_NODShiLtJ_T0048155.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78001957 78944838 + MGP_NODShiLtJ_P0048155 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048156.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78001976 78687898 + Dlgap1 protein_coding retained_intron MGP_NODShiLtJ_T0048157.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78495435 78948843 + MGP_NODShiLtJ_P0048157 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048158.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78601195 78947276 + MGP_NODShiLtJ_P0048158 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048159.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78607032 78689235 + Dlgap1 protein_coding retained_intron MGP_NODShiLtJ_T0048160.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78607091 78912111 + Dlgap1 protein_coding retained_intron MGP_NODShiLtJ_T0048161.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78607091 78950416 + MGP_NODShiLtJ_P0048161 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048162.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78607100 78947587 + MGP_NODShiLtJ_P0048162 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048163.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78607117 78947344 + MGP_NODShiLtJ_P0048163 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048164.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78652435 78832853 + Dlgap1 protein_coding retained_intron MGP_NODShiLtJ_T0048165.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78652670 78945135 + MGP_NODShiLtJ_P0048165 Dlgap1 protein_coding protein_coding MGP_NODShiLtJ_T0048166.1 MGP_NODShiLtJ_G0023820.1 mouse_genomes_project 17 78686096 78950421 + MGP_NODShiLtJ_P0048166 Dlgap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046750.1 MGP_NODShiLtJ_G0023384.1 mouse_genomes_project 17 35912142 35922822 + MGP_NODShiLtJ_P0046750 Tap1 protein_coding protein_coding MGP_NODShiLtJ_T0046751.1 MGP_NODShiLtJ_G0023384.1 mouse_genomes_project 17 35912317 35917879 + Tap1 protein_coding retained_intron MGP_NODShiLtJ_T0046752.1 MGP_NODShiLtJ_G0023384.1 mouse_genomes_project 17 35912323 35922822 + Tap1 protein_coding retained_intron MGP_NODShiLtJ_T0046753.1 MGP_NODShiLtJ_G0023384.1 mouse_genomes_project 17 35912391 35922816 + MGP_NODShiLtJ_P0046753 Tap1 protein_coding protein_coding MGP_NODShiLtJ_T0046754.1 MGP_NODShiLtJ_G0023384.1 mouse_genomes_project 17 35915494 35922817 + Tap1 protein_coding retained_intron MGP_NODShiLtJ_T0046755.1 MGP_NODShiLtJ_G0023384.1 mouse_genomes_project 17 35916354 35919167 + MGP_NODShiLtJ_P0046755 Tap1 protein_coding protein_coding MGP_NODShiLtJ_T0046756.1 MGP_NODShiLtJ_G0023384.1 mouse_genomes_project 17 35918652 35922184 + Tap1 protein_coding retained_intron MGP_NODShiLtJ_T0048387.1 MGP_NODShiLtJ_G0023901.1 mouse_genomes_project 17 94745655 94780696 + MGP_NODShiLtJ_P0048387 Dync2li1 protein_coding protein_coding MGP_NODShiLtJ_T0013157.1 MGP_NODShiLtJ_G0011265.1 mouse_genomes_project 17 59277661 59278788 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003676.1 MGP_NODShiLtJ_G0003310.1 mouse_genomes_project 17 28918191 28938503 - Gm15598 antisense antisense MGP_NODShiLtJ_T0099003.1 MGP_NODShiLtJ_G0037397.1 mouse_genomes_project 17 52432189 52432359 - Gm25201 snRNA snRNA MGP_NODShiLtJ_T0099002.1 MGP_NODShiLtJ_G0037396.1 mouse_genomes_project 17 50656586 50656693 - Gm22474 snRNA snRNA MGP_NODShiLtJ_T0047912.1 MGP_NODShiLtJ_G0023726.1 mouse_genomes_project 17 61740056 61746207 + MGP_NODShiLtJ_P0047912 Shd protein_coding protein_coding MGP_NODShiLtJ_T0047913.1 MGP_NODShiLtJ_G0023726.1 mouse_genomes_project 17 61740103 61746219 + MGP_NODShiLtJ_P0047913 Shd protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046648.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35613574 35614527 + Rgl2 protein_coding retained_intron MGP_NODShiLtJ_T0046649.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35613613 35621664 + MGP_NODShiLtJ_P0046649 Rgl2 protein_coding protein_coding MGP_NODShiLtJ_T0046650.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35613934 35616244 + Rgl2 protein_coding processed_transcript MGP_NODShiLtJ_T0046651.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35614004 35616409 + Rgl2 protein_coding retained_intron MGP_NODShiLtJ_T0046652.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35614920 35616067 + Rgl2 protein_coding retained_intron MGP_NODShiLtJ_T0046653.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35614929 35616551 + Rgl2 protein_coding processed_transcript MGP_NODShiLtJ_T0046654.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35614945 35615984 + Rgl2 protein_coding retained_intron MGP_NODShiLtJ_T0046655.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35615247 35616541 + Rgl2 protein_coding retained_intron MGP_NODShiLtJ_T0046656.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35616089 35617262 + Rgl2 protein_coding retained_intron MGP_NODShiLtJ_T0046657.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35616168 35617185 + Rgl2 protein_coding retained_intron MGP_NODShiLtJ_T0046658.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35617969 35621195 + MGP_NODShiLtJ_P0046658 Rgl2 protein_coding protein_coding MGP_NODShiLtJ_T0046659.1 MGP_NODShiLtJ_G0023366.1 mouse_genomes_project 17 35619346 35620861 + Rgl2 protein_coding retained_intron MGP_NODShiLtJ_T0046500.1 MGP_NODShiLtJ_G0023327.1 mouse_genomes_project 17 34132507 34157051 + MGP_NODShiLtJ_P0046500 Cyp4f40 protein_coding protein_coding MGP_NODShiLtJ_T0048034.1 MGP_NODShiLtJ_G0023774.1 mouse_genomes_project 17 62937209 62950505 - MGP_NODShiLtJ_P0048034 Dennd1c protein_coding protein_coding MGP_NODShiLtJ_T0097979.1 MGP_NODShiLtJ_G0036391.1 mouse_genomes_project 17 94026402 94026511 + Gm23905 rRNA rRNA MGP_NODShiLtJ_T0047800.1 MGP_NODShiLtJ_G0023689.1 mouse_genomes_project 17 52961850 52978391 + MGP_NODShiLtJ_P0047800 Trem3 protein_coding protein_coding MGP_NODShiLtJ_T0006872.1 MGP_NODShiLtJ_G0005650.1 mouse_genomes_project 17 33541942 33572851 + Gm17276 lincRNA lincRNA MGP_NODShiLtJ_T0047760.1 MGP_NODShiLtJ_G0023680.1 mouse_genomes_project 17 52311353 52321596 + MGP_NODShiLtJ_P0047760 Pgc protein_coding protein_coding MGP_NODShiLtJ_T0047761.1 MGP_NODShiLtJ_G0023680.1 mouse_genomes_project 17 52311355 52318462 + MGP_NODShiLtJ_P0047761 Pgc protein_coding protein_coding MGP_NODShiLtJ_T0048383.1 MGP_NODShiLtJ_G0023897.1 mouse_genomes_project 17 93904605 93919969 - MGP_NODShiLtJ_P0048383 Haao protein_coding protein_coding MGP_NODShiLtJ_T0045819.1 MGP_NODShiLtJ_G0023167.1 mouse_genomes_project 17 25937632 25939400 + MGP_NODShiLtJ_P0045819 Prss34 protein_coding protein_coding MGP_NODShiLtJ_T0101746.1 MGP_NODShiLtJ_G0039914.1 mouse_genomes_project 17 38758565 38758786 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045795.1 MGP_NODShiLtJ_G0023164.1 mouse_genomes_project 17 25878295 25880917 + MGP_NODShiLtJ_P0045795 Tsr3 protein_coding protein_coding MGP_NODShiLtJ_T0048407.1 MGP_NODShiLtJ_G0023908.1 mouse_genomes_project 17 95241381 95639119 + MGP_NODShiLtJ_P0048407 Camkmt protein_coding protein_coding MGP_NODShiLtJ_T0099022.1 MGP_NODShiLtJ_G0037416.1 mouse_genomes_project 17 106345367 106345476 - Gm22593 snRNA snRNA MGP_NODShiLtJ_T0047845.1 MGP_NODShiLtJ_G0023701.1 mouse_genomes_project 17 54233643 54242994 + MGP_NODShiLtJ_P0047845 Mocs1 protein_coding protein_coding MGP_NODShiLtJ_T0047846.1 MGP_NODShiLtJ_G0023701.1 mouse_genomes_project 17 54233645 54252822 + MGP_NODShiLtJ_P0047846 Mocs1 protein_coding protein_coding MGP_NODShiLtJ_T0047847.1 MGP_NODShiLtJ_G0023701.1 mouse_genomes_project 17 54233691 54252825 + MGP_NODShiLtJ_P0047847 Mocs1 protein_coding protein_coding MGP_NODShiLtJ_T0047848.1 MGP_NODShiLtJ_G0023701.1 mouse_genomes_project 17 54233723 54252186 + MGP_NODShiLtJ_P0047848 Mocs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047849.1 MGP_NODShiLtJ_G0023701.1 mouse_genomes_project 17 54233723 54252186 + MGP_NODShiLtJ_P0047849 Mocs1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047850.1 MGP_NODShiLtJ_G0023701.1 mouse_genomes_project 17 54238514 54240853 + Mocs1 protein_coding processed_transcript MGP_NODShiLtJ_T0047851.1 MGP_NODShiLtJ_G0023701.1 mouse_genomes_project 17 54247368 54251664 + MGP_NODShiLtJ_P0047851 Mocs1 protein_coding protein_coding MGP_NODShiLtJ_T0047852.1 MGP_NODShiLtJ_G0023701.1 mouse_genomes_project 17 54249789 54252825 + MGP_NODShiLtJ_P0047852 Mocs1 protein_coding protein_coding MGP_NODShiLtJ_T0013161.1 MGP_NODShiLtJ_G0011269.1 mouse_genomes_project 17 61789272 61789534 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000960.1 MGP_NODShiLtJ_G0000887.1 mouse_genomes_project 17 31702767 31704233 + TEC TEC MGP_NODShiLtJ_T0000961.1 MGP_NODShiLtJ_G0000887.1 mouse_genomes_project 17 31703619 31704072 + TEC TEC MGP_NODShiLtJ_T0000963.1 MGP_NODShiLtJ_G0000889.1 mouse_genomes_project 17 55060224 55061241 + TEC TEC MGP_NODShiLtJ_T0101756.1 MGP_NODShiLtJ_G0039924.1 mouse_genomes_project 17 39232552 39234739 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045292.1 MGP_NODShiLtJ_G0022988.1 mouse_genomes_project 17 12578456 12593345 - MGP_NODShiLtJ_P0045292 Dact2 protein_coding protein_coding MGP_NODShiLtJ_T0045900.1 MGP_NODShiLtJ_G0023192.1 mouse_genomes_project 17 26508889 26516186 - MGP_NODShiLtJ_P0045900 Gm20683 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045228.1 MGP_NODShiLtJ_G0022969.1 mouse_genomes_project 17 10263978 10352374 - MGP_NODShiLtJ_P0045228 Map3k4 protein_coding protein_coding MGP_NODShiLtJ_T0003718.1 MGP_NODShiLtJ_G0003341.1 mouse_genomes_project 17 52275345 52277371 - Frs3os antisense antisense MGP_NODShiLtJ_T0003719.1 MGP_NODShiLtJ_G0003341.1 mouse_genomes_project 17 52275414 52276204 - Frs3os antisense antisense MGP_NODShiLtJ_T0003720.1 MGP_NODShiLtJ_G0003341.1 mouse_genomes_project 17 52275697 52277354 - Frs3os antisense antisense MGP_NODShiLtJ_T0045791.1 MGP_NODShiLtJ_G0023162.1 mouse_genomes_project 17 25859007 25869809 + MGP_NODShiLtJ_P0045791 Gm5819 protein_coding protein_coding MGP_NODShiLtJ_T0048490.1 MGP_NODShiLtJ_G0023936.1 mouse_genomes_project 17 99510922 99740202 - MGP_NODShiLtJ_P0048490 Fshr protein_coding protein_coding MGP_NODShiLtJ_T0101706.1 MGP_NODShiLtJ_G0039875.1 mouse_genomes_project 17 21257932 21258115 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045874.1 MGP_NODShiLtJ_G0023184.1 mouse_genomes_project 17 26451932 26457630 - MGP_NODShiLtJ_P0045874 Haghl protein_coding protein_coding MGP_NODShiLtJ_T0045875.1 MGP_NODShiLtJ_G0023184.1 mouse_genomes_project 17 26454879 26457425 - Haghl protein_coding retained_intron MGP_NODShiLtJ_T0045876.1 MGP_NODShiLtJ_G0023184.1 mouse_genomes_project 17 26454891 26457622 - Haghl protein_coding retained_intron MGP_NODShiLtJ_T0045877.1 MGP_NODShiLtJ_G0023184.1 mouse_genomes_project 17 26455099 26457660 - MGP_NODShiLtJ_P0045877 Haghl protein_coding protein_coding MGP_NODShiLtJ_T0045878.1 MGP_NODShiLtJ_G0023184.1 mouse_genomes_project 17 26455629 26457657 - Haghl protein_coding retained_intron MGP_NODShiLtJ_T0045879.1 MGP_NODShiLtJ_G0023184.1 mouse_genomes_project 17 26455918 26457656 - Haghl protein_coding retained_intron MGP_NODShiLtJ_T0045880.1 MGP_NODShiLtJ_G0023184.1 mouse_genomes_project 17 26456222 26457395 - Haghl protein_coding retained_intron MGP_NODShiLtJ_T0045881.1 MGP_NODShiLtJ_G0023184.1 mouse_genomes_project 17 26456405 26457633 - MGP_NODShiLtJ_P0045881 Haghl protein_coding protein_coding MGP_NODShiLtJ_T0045414.1 MGP_NODShiLtJ_G0023045.1 mouse_genomes_project 17 21249071 21251508 + MGP_NODShiLtJ_P0045414 Vmn1r235 protein_coding protein_coding MGP_NODShiLtJ_T0047483.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48730906 48987667 - MGP_NODShiLtJ_P0047483 Runx2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047484.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48845252 49072905 - MGP_NODShiLtJ_P0047484 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047485.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48845252 48988139 - MGP_NODShiLtJ_P0047485 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047486.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48847497 48987201 - MGP_NODShiLtJ_P0047486 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047487.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48848767 49072689 - MGP_NODShiLtJ_P0047487 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047488.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48849055 48987125 - MGP_NODShiLtJ_P0047488 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047489.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48849055 49072334 - MGP_NODShiLtJ_P0047489 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047490.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48849141 49072735 - MGP_NODShiLtJ_P0047490 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047491.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48849237 49072905 - MGP_NODShiLtJ_P0047491 Runx2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047492.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48849551 48986860 - MGP_NODShiLtJ_P0047492 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047493.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48879995 48987125 - MGP_NODShiLtJ_P0047493 Runx2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047494.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48884104 48986187 - MGP_NODShiLtJ_P0047494 Runx2 protein_coding protein_coding MGP_NODShiLtJ_T0047495.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 48884200 49072372 - MGP_NODShiLtJ_P0047495 Runx2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047500.1 MGP_NODShiLtJ_G0023608.1 mouse_genomes_project 17 49072013 49072735 - Runx2 protein_coding retained_intron MGP_NODShiLtJ_T0003708.1 MGP_NODShiLtJ_G0003334.1 mouse_genomes_project 17 47752953 47756123 - 1700071M16Rik antisense antisense MGP_NODShiLtJ_T0003709.1 MGP_NODShiLtJ_G0003334.1 mouse_genomes_project 17 47753146 47756123 - 1700071M16Rik antisense antisense MGP_NODShiLtJ_T0003710.1 MGP_NODShiLtJ_G0003334.1 mouse_genomes_project 17 47755773 47757045 - 1700071M16Rik antisense antisense MGP_NODShiLtJ_T0003711.1 MGP_NODShiLtJ_G0003334.1 mouse_genomes_project 17 47755773 47757055 - 1700071M16Rik antisense antisense MGP_NODShiLtJ_T0048044.1 MGP_NODShiLtJ_G0023781.1 mouse_genomes_project 17 63122984 63136602 - MGP_NODShiLtJ_P0048044 Gpr108 protein_coding protein_coding MGP_NODShiLtJ_T0013098.1 MGP_NODShiLtJ_G0011206.1 mouse_genomes_project 17 22083946 22084688 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013086.1 MGP_NODShiLtJ_G0011194.1 mouse_genomes_project 17 7116061 7117454 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010102.1 MGP_NODShiLtJ_G0008235.1 mouse_genomes_project 17 35740531 35740641 - Mir219a-1 miRNA miRNA MGP_NODShiLtJ_T0045784.1 MGP_NODShiLtJ_G0023160.1 mouse_genomes_project 17 25814973 25818087 + MGP_NODShiLtJ_P0045784 BC003965 protein_coding protein_coding MGP_NODShiLtJ_T0047372.1 MGP_NODShiLtJ_G0023531.1 mouse_genomes_project 17 39597922 39602187 + MGP_NODShiLtJ_P0047372 H2-M3 protein_coding protein_coding MGP_NODShiLtJ_T0010075.1 MGP_NODShiLtJ_G0008208.1 mouse_genomes_project 17 16776198 16776268 + Mir99b miRNA miRNA MGP_NODShiLtJ_T0101688.1 MGP_NODShiLtJ_G0039857.1 mouse_genomes_project 17 17963833 18778466 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046904.1 MGP_NODShiLtJ_G0023416.1 mouse_genomes_project 17 36745828 36748467 - MGP_NODShiLtJ_P0046904 Cfb protein_coding protein_coding MGP_NODShiLtJ_T0046905.1 MGP_NODShiLtJ_G0023416.1 mouse_genomes_project 17 36745838 36751955 - MGP_NODShiLtJ_P0046905 Cfb protein_coding protein_coding MGP_NODShiLtJ_T0046906.1 MGP_NODShiLtJ_G0023416.1 mouse_genomes_project 17 36745845 36747583 - MGP_NODShiLtJ_P0046906 Cfb protein_coding protein_coding MGP_NODShiLtJ_T0046907.1 MGP_NODShiLtJ_G0023416.1 mouse_genomes_project 17 36745866 36748752 - MGP_NODShiLtJ_P0046907 Cfb protein_coding protein_coding MGP_NODShiLtJ_T0046910.1 MGP_NODShiLtJ_G0023416.1 mouse_genomes_project 17 36745881 36751547 - MGP_NODShiLtJ_P0046910 Cfb protein_coding protein_coding MGP_NODShiLtJ_T0046911.1 MGP_NODShiLtJ_G0023416.1 mouse_genomes_project 17 36746028 36748483 - MGP_NODShiLtJ_P0046911 Cfb protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006876.1 MGP_NODShiLtJ_G0005654.1 mouse_genomes_project 17 35585613 35590727 + lincRNA lincRNA MGP_NODShiLtJ_T0045247.1 MGP_NODShiLtJ_G0022978.1 mouse_genomes_project 17 11001341 11007073 - MGP_NODShiLtJ_P0045247 Mrpl18 protein_coding protein_coding MGP_NODShiLtJ_T0045248.1 MGP_NODShiLtJ_G0022978.1 mouse_genomes_project 17 11003838 11006351 - Mrpl18 protein_coding processed_transcript MGP_NODShiLtJ_T0045249.1 MGP_NODShiLtJ_G0022978.1 mouse_genomes_project 17 11003943 11006830 - Mrpl18 protein_coding retained_intron MGP_NODShiLtJ_T0045250.1 MGP_NODShiLtJ_G0022978.1 mouse_genomes_project 17 11003987 11006929 - Mrpl18 protein_coding processed_transcript MGP_NODShiLtJ_T0045251.1 MGP_NODShiLtJ_G0022978.1 mouse_genomes_project 17 11006228 11006796 - Mrpl18 protein_coding retained_intron MGP_NODShiLtJ_T0047457.1 MGP_NODShiLtJ_G0023598.1 mouse_genomes_project 17 47621922 47657438 - MGP_NODShiLtJ_P0047457 Mep1a protein_coding protein_coding MGP_NODShiLtJ_T0047458.1 MGP_NODShiLtJ_G0023598.1 mouse_genomes_project 17 47621929 47657399 - MGP_NODShiLtJ_P0047458 Mep1a protein_coding protein_coding MGP_NODShiLtJ_T0047459.1 MGP_NODShiLtJ_G0023598.1 mouse_genomes_project 17 47652205 47655108 - Mep1a protein_coding processed_transcript MGP_NODShiLtJ_T0047460.1 MGP_NODShiLtJ_G0023598.1 mouse_genomes_project 17 47656869 47657359 - Mep1a protein_coding retained_intron MGP_NODShiLtJ_T0101684.1 MGP_NODShiLtJ_G0039853.1 mouse_genomes_project 17 17091964 19850793 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048354.1 MGP_NODShiLtJ_G0023886.1 mouse_genomes_project 17 90210104 90371691 - MGP_NODShiLtJ_P0048354 Map4k3 protein_coding protein_coding MGP_NODShiLtJ_T0048355.1 MGP_NODShiLtJ_G0023886.1 mouse_genomes_project 17 90210104 90371691 - MGP_NODShiLtJ_P0048355 Map4k3 protein_coding protein_coding MGP_NODShiLtJ_T0010083.1 MGP_NODShiLtJ_G0008216.1 mouse_genomes_project 17 25194006 25194100 + Gm24589 miRNA miRNA MGP_NODShiLtJ_T0011324.1 MGP_NODShiLtJ_G0009457.1 mouse_genomes_project 17 84894644 84894752 - Gm26124 misc_RNA misc_RNA MGP_NODShiLtJ_T0046017.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26976571 27010030 + MGP_NODShiLtJ_P0046017 Luc7l protein_coding protein_coding MGP_NODShiLtJ_T0046018.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26976612 27016082 + MGP_NODShiLtJ_P0046018 Luc7l protein_coding protein_coding MGP_NODShiLtJ_T0046019.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26976617 27007126 + MGP_NODShiLtJ_P0046019 Luc7l protein_coding protein_coding MGP_NODShiLtJ_T0046020.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26976627 27012510 + MGP_NODShiLtJ_P0046020 Luc7l protein_coding protein_coding MGP_NODShiLtJ_T0046021.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26976627 27012512 + MGP_NODShiLtJ_P0046021 Luc7l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046022.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26976645 27010031 + Luc7l protein_coding retained_intron MGP_NODShiLtJ_T0046023.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26976660 27010034 + MGP_NODShiLtJ_P0046023 Luc7l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046024.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26976883 26994254 + MGP_NODShiLtJ_P0046024 Luc7l protein_coding protein_coding MGP_NODShiLtJ_T0046025.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26977046 26977914 + Luc7l protein_coding processed_transcript MGP_NODShiLtJ_T0046026.1 MGP_NODShiLtJ_G0023215.1 mouse_genomes_project 17 26995135 27012488 + MGP_NODShiLtJ_P0046026 Luc7l protein_coding protein_coding MGP_NODShiLtJ_T0046699.1 MGP_NODShiLtJ_G0023375.1 mouse_genomes_project 17 35743808 35747233 - MGP_NODShiLtJ_P0046699 Slc39a7 protein_coding protein_coding MGP_NODShiLtJ_T0046700.1 MGP_NODShiLtJ_G0023375.1 mouse_genomes_project 17 35743810 35747087 - MGP_NODShiLtJ_P0046700 Slc39a7 protein_coding protein_coding MGP_NODShiLtJ_T0046701.1 MGP_NODShiLtJ_G0023375.1 mouse_genomes_project 17 35743814 35747191 - Slc39a7 protein_coding retained_intron MGP_NODShiLtJ_T0046702.1 MGP_NODShiLtJ_G0023375.1 mouse_genomes_project 17 35745387 35746571 - Slc39a7 protein_coding retained_intron MGP_NODShiLtJ_T0046703.1 MGP_NODShiLtJ_G0023375.1 mouse_genomes_project 17 35745715 35747199 - MGP_NODShiLtJ_P0046703 Slc39a7 protein_coding protein_coding MGP_NODShiLtJ_T0046704.1 MGP_NODShiLtJ_G0023375.1 mouse_genomes_project 17 35746135 35747225 - Slc39a7 protein_coding processed_transcript MGP_NODShiLtJ_T0045403.1 MGP_NODShiLtJ_G0023040.1 mouse_genomes_project 17 20865729 20866888 - MGP_NODShiLtJ_P0045403 Vmn1r232 protein_coding protein_coding MGP_NODShiLtJ_T0046542.1 MGP_NODShiLtJ_G0023344.1 mouse_genomes_project 17 34852925 34853880 + MGP_NODShiLtJ_P0046542 Olfr63 protein_coding protein_coding MGP_NODShiLtJ_T0045232.1 MGP_NODShiLtJ_G0022973.1 mouse_genomes_project 17 10705879 10736731 - MGP_NODShiLtJ_P0045232 Slc22a1 protein_coding protein_coding MGP_NODShiLtJ_T0048214.1 MGP_NODShiLtJ_G0023829.1 mouse_genomes_project 17 79652699 79654291 - Gm4707 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0048215.1 MGP_NODShiLtJ_G0023829.1 mouse_genomes_project 17 79653397 79653673 - MGP_NODShiLtJ_P0048215 Gm4707 protein_coding protein_coding MGP_NODShiLtJ_T0048216.1 MGP_NODShiLtJ_G0023829.1 mouse_genomes_project 17 79654202 79654768 - MGP_NODShiLtJ_P0048216 Gm4707 protein_coding protein_coding MGP_NODShiLtJ_T0013181.1 MGP_NODShiLtJ_G0011289.1 mouse_genomes_project 17 101269882 101270217 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097980.1 MGP_NODShiLtJ_G0036392.1 mouse_genomes_project 17 106804371 106804478 + Gm23964 rRNA rRNA MGP_NODShiLtJ_T0013124.1 MGP_NODShiLtJ_G0011232.1 mouse_genomes_project 17 38438489 38438802 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048246.1 MGP_NODShiLtJ_G0023842.1 mouse_genomes_project 17 82256542 82284619 + MGP_NODShiLtJ_P0048246 Ehd3 protein_coding protein_coding MGP_NODShiLtJ_T0048247.1 MGP_NODShiLtJ_G0023843.1 mouse_genomes_project 17 82334872 82406289 - MGP_NODShiLtJ_P0048247 Xdh protein_coding protein_coding MGP_NODShiLtJ_T0048058.1 MGP_NODShiLtJ_G0023788.1 mouse_genomes_project 17 64923009 64928252 - Pdzph1 protein_coding retained_intron MGP_NODShiLtJ_T0048059.1 MGP_NODShiLtJ_G0023788.1 mouse_genomes_project 17 64923009 65049681 - MGP_NODShiLtJ_P0048059 Pdzph1 protein_coding protein_coding MGP_NODShiLtJ_T0048060.1 MGP_NODShiLtJ_G0023788.1 mouse_genomes_project 17 64923171 64937668 - MGP_NODShiLtJ_P0048060 Pdzph1 protein_coding protein_coding MGP_NODShiLtJ_T0006926.1 MGP_NODShiLtJ_G0005690.1 mouse_genomes_project 17 95089287 95095146 - lincRNA lincRNA MGP_NODShiLtJ_T0045457.1 MGP_NODShiLtJ_G0023071.1 mouse_genomes_project 17 23209860 23231327 - MGP_NODShiLtJ_P0045457 Vmn2r113 protein_coding protein_coding MGP_NODShiLtJ_T0048491.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100659429 101918697 - MGP_NODShiLtJ_P0048491 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048492.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100659442 101923665 - MGP_NODShiLtJ_P0048492 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048493.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100662611 100720923 - MGP_NODShiLtJ_P0048493 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048494.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100662613 101918705 - MGP_NODShiLtJ_P0048494 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048495.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100664130 101148022 - MGP_NODShiLtJ_P0048495 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048496.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100664600 100720927 - MGP_NODShiLtJ_P0048496 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048497.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100664627 101148036 - MGP_NODShiLtJ_P0048497 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048498.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100665000 101918516 - MGP_NODShiLtJ_P0048498 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048499.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100665184 100720667 - Nrxn1 protein_coding processed_transcript MGP_NODShiLtJ_T0048500.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100665207 101918516 - MGP_NODShiLtJ_P0048500 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048501.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100665223 101923327 - MGP_NODShiLtJ_P0048501 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048502.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100665223 101148100 - MGP_NODShiLtJ_P0048502 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048503.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100665651 100851393 - MGP_NODShiLtJ_P0048503 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048504.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100799008 101019785 - Nrxn1 protein_coding processed_transcript MGP_NODShiLtJ_T0048505.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100851258 101923397 - Nrxn1 protein_coding retained_intron MGP_NODShiLtJ_T0048506.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 100851258 101146976 - Nrxn1 protein_coding retained_intron MGP_NODShiLtJ_T0048507.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101036572 101290822 - MGP_NODShiLtJ_P0048507 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048508.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101036813 101290971 - MGP_NODShiLtJ_P0048508 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048509.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101145950 101148723 - Nrxn1 protein_coding retained_intron MGP_NODShiLtJ_T0048510.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101231283 101918273 - Nrxn1 protein_coding processed_transcript MGP_NODShiLtJ_T0048511.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101246651 101445519 - MGP_NODShiLtJ_P0048511 Nrxn1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048512.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101292038 101337711 - MGP_NODShiLtJ_P0048512 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048513.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101292316 101441619 - MGP_NODShiLtJ_P0048513 Nrxn1 protein_coding protein_coding MGP_NODShiLtJ_T0048514.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101327047 101337514 - Nrxn1 protein_coding retained_intron MGP_NODShiLtJ_T0048515.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101440775 101923365 - Nrxn1 protein_coding retained_intron MGP_NODShiLtJ_T0048516.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101444021 101923385 - Nrxn1 protein_coding retained_intron MGP_NODShiLtJ_T0048517.1 MGP_NODShiLtJ_G0023937.1 mouse_genomes_project 17 101915247 101923347 - Nrxn1 protein_coding retained_intron MGP_NODShiLtJ_T0047937.1 MGP_NODShiLtJ_G0023735.1 mouse_genomes_project 17 61893957 61899953 - MGP_NODShiLtJ_P0047937 Plin5 protein_coding protein_coding MGP_NODShiLtJ_T0047938.1 MGP_NODShiLtJ_G0023735.1 mouse_genomes_project 17 61893963 61899655 - MGP_NODShiLtJ_P0047938 Plin5 protein_coding protein_coding MGP_NODShiLtJ_T0101709.1 MGP_NODShiLtJ_G0039878.1 mouse_genomes_project 17 23323991 23324698 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006859.1 MGP_NODShiLtJ_G0005642.1 mouse_genomes_project 17 29526075 29526843 - Gm20109 lincRNA lincRNA MGP_NODShiLtJ_T0003664.1 MGP_NODShiLtJ_G0003299.1 mouse_genomes_project 17 12076497 12077109 - Gm16052 antisense antisense MGP_NODShiLtJ_T0101768.1 MGP_NODShiLtJ_G0039936.1 mouse_genomes_project 17 39837452 39838009 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010129.1 MGP_NODShiLtJ_G0008262.1 mouse_genomes_project 17 87718027 87718113 + Gm25069 miRNA miRNA MGP_NODShiLtJ_T0048328.1 MGP_NODShiLtJ_G0023872.1 mouse_genomes_project 17 89152017 89154022 + MGP_NODShiLtJ_P0048328 4921513D11Rik protein_coding protein_coding MGP_NODShiLtJ_T0013118.1 MGP_NODShiLtJ_G0011226.1 mouse_genomes_project 17 37965555 37965882 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101763.1 MGP_NODShiLtJ_G0039931.1 mouse_genomes_project 17 39755368 39756295 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101738.1 MGP_NODShiLtJ_G0039906.1 mouse_genomes_project 17 38380647 38381589 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047691.1 MGP_NODShiLtJ_G0023658.1 mouse_genomes_project 17 51248556 51259899 - MGP_NODShiLtJ_P0047691 Rpl7l1 protein_coding protein_coding MGP_NODShiLtJ_T0010107.1 MGP_NODShiLtJ_G0008240.1 mouse_genomes_project 17 36747010 36747074 - Mir6972 miRNA miRNA MGP_NODShiLtJ_T0045535.1 MGP_NODShiLtJ_G0023099.1 mouse_genomes_project 17 24388166 24390658 + MGP_NODShiLtJ_P0045535 protein_coding protein_coding MGP_NODShiLtJ_T0010121.1 MGP_NODShiLtJ_G0008254.1 mouse_genomes_project 17 62219730 62219794 - Mir6977 miRNA miRNA MGP_NODShiLtJ_T0045174.1 MGP_NODShiLtJ_G0022957.1 mouse_genomes_project 17 5972921 5999671 + MGP_NODShiLtJ_P0045174 Mpc1 protein_coding protein_coding MGP_NODShiLtJ_T0045175.1 MGP_NODShiLtJ_G0022957.1 mouse_genomes_project 17 5975041 5989109 + Mpc1 protein_coding retained_intron MGP_NODShiLtJ_T0045176.1 MGP_NODShiLtJ_G0022957.1 mouse_genomes_project 17 5975097 6000057 + MGP_NODShiLtJ_P0045176 Mpc1 protein_coding protein_coding MGP_NODShiLtJ_T0045177.1 MGP_NODShiLtJ_G0022957.1 mouse_genomes_project 17 5975699 6000222 + MGP_NODShiLtJ_P0045177 Mpc1 protein_coding protein_coding MGP_NODShiLtJ_T0045178.1 MGP_NODShiLtJ_G0022957.1 mouse_genomes_project 17 5991593 5999936 + Mpc1 protein_coding retained_intron MGP_NODShiLtJ_T0045179.1 MGP_NODShiLtJ_G0022957.1 mouse_genomes_project 17 5991855 6000222 + MGP_NODShiLtJ_P0045179 Mpc1 protein_coding protein_coding MGP_NODShiLtJ_T0045940.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26559028 26600511 - MGP_NODShiLtJ_P0045940 Rab40c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045941.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26559028 26600607 - MGP_NODShiLtJ_P0045941 Rab40c protein_coding protein_coding MGP_NODShiLtJ_T0045942.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26559028 26600597 - MGP_NODShiLtJ_P0045942 Rab40c protein_coding protein_coding MGP_NODShiLtJ_T0045943.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26559028 26600669 - MGP_NODShiLtJ_P0045943 Rab40c protein_coding protein_coding MGP_NODShiLtJ_T0045944.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26559031 26594587 - Rab40c protein_coding processed_transcript MGP_NODShiLtJ_T0045945.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26560542 26600461 - MGP_NODShiLtJ_P0045945 Rab40c protein_coding protein_coding MGP_NODShiLtJ_T0045946.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26560553 26600682 - MGP_NODShiLtJ_P0045946 Rab40c protein_coding protein_coding MGP_NODShiLtJ_T0045947.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26561677 26600645 - Rab40c protein_coding processed_transcript MGP_NODShiLtJ_T0045948.1 MGP_NODShiLtJ_G0023199.1 mouse_genomes_project 17 26561996 26600666 - MGP_NODShiLtJ_P0045948 Rab40c protein_coding protein_coding MGP_NODShiLtJ_T0047692.1 MGP_NODShiLtJ_G0023659.1 mouse_genomes_project 17 51275157 51314643 - MGP_NODShiLtJ_P0047692 Gltscr1l protein_coding protein_coding MGP_NODShiLtJ_T0046088.1 MGP_NODShiLtJ_G0023232.1 mouse_genomes_project 17 27886302 27958886 + MGP_NODShiLtJ_P0046088 Itpr3 protein_coding protein_coding MGP_NODShiLtJ_T0047267.1 MGP_NODShiLtJ_G0023493.1 mouse_genomes_project 17 38266217 38272363 - MGP_NODShiLtJ_P0047267 Gm8909 protein_coding protein_coding MGP_NODShiLtJ_T0046259.1 MGP_NODShiLtJ_G0023268.1 mouse_genomes_project 17 29919529 29953946 + MGP_NODShiLtJ_P0046259 Pnpla1 protein_coding protein_coding MGP_NODShiLtJ_T0046809.1 MGP_NODShiLtJ_G0023400.1 mouse_genomes_project 17 36405343 36410733 + MGP_NODShiLtJ_P0046809 Pbx2 protein_coding protein_coding MGP_NODShiLtJ_T0046810.1 MGP_NODShiLtJ_G0023400.1 mouse_genomes_project 17 36405571 36410730 + MGP_NODShiLtJ_P0046810 Pbx2 protein_coding protein_coding MGP_NODShiLtJ_T0046811.1 MGP_NODShiLtJ_G0023400.1 mouse_genomes_project 17 36406060 36409746 + MGP_NODShiLtJ_P0046811 Pbx2 protein_coding protein_coding MGP_NODShiLtJ_T0046812.1 MGP_NODShiLtJ_G0023400.1 mouse_genomes_project 17 36406722 36407712 + MGP_NODShiLtJ_P0046812 Pbx2 protein_coding protein_coding MGP_NODShiLtJ_T0046813.1 MGP_NODShiLtJ_G0023400.1 mouse_genomes_project 17 36408789 36409557 + Pbx2 protein_coding retained_intron MGP_NODShiLtJ_T0101741.1 MGP_NODShiLtJ_G0039909.1 mouse_genomes_project 17 38397462 38400576 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047509.1 MGP_NODShiLtJ_G0023617.1 mouse_genomes_project 17 49890450 49895957 - MGP_NODShiLtJ_P0047509 Hsp90ab1 protein_coding protein_coding MGP_NODShiLtJ_T0047510.1 MGP_NODShiLtJ_G0023617.1 mouse_genomes_project 17 49891533 49892415 - Hsp90ab1 protein_coding retained_intron MGP_NODShiLtJ_T0047511.1 MGP_NODShiLtJ_G0023617.1 mouse_genomes_project 17 49891693 49895939 - MGP_NODShiLtJ_P0047511 Hsp90ab1 protein_coding protein_coding MGP_NODShiLtJ_T0047512.1 MGP_NODShiLtJ_G0023617.1 mouse_genomes_project 17 49892256 49895941 - MGP_NODShiLtJ_P0047512 Hsp90ab1 protein_coding protein_coding MGP_NODShiLtJ_T0047513.1 MGP_NODShiLtJ_G0023617.1 mouse_genomes_project 17 49893123 49894259 - Hsp90ab1 protein_coding retained_intron MGP_NODShiLtJ_T0047514.1 MGP_NODShiLtJ_G0023617.1 mouse_genomes_project 17 49893339 49895941 - MGP_NODShiLtJ_P0047514 Hsp90ab1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047515.1 MGP_NODShiLtJ_G0023617.1 mouse_genomes_project 17 49893694 49895957 - Hsp90ab1 protein_coding retained_intron MGP_NODShiLtJ_T0047516.1 MGP_NODShiLtJ_G0023617.1 mouse_genomes_project 17 49894214 49895231 - MGP_NODShiLtJ_P0047516 Hsp90ab1 protein_coding protein_coding MGP_NODShiLtJ_T0047796.1 MGP_NODShiLtJ_G0023686.1 mouse_genomes_project 17 52796915 52858969 - MGP_NODShiLtJ_P0047796 protein_coding protein_coding MGP_NODShiLtJ_T0045415.1 MGP_NODShiLtJ_G0023046.1 mouse_genomes_project 17 21280524 21281645 + MGP_NODShiLtJ_P0045415 Vmn1r236 protein_coding protein_coding MGP_NODShiLtJ_T0003673.1 MGP_NODShiLtJ_G0003307.1 mouse_genomes_project 17 27934484 27936251 - Itpr3os antisense antisense MGP_NODShiLtJ_T0045450.1 MGP_NODShiLtJ_G0023068.1 mouse_genomes_project 17 22975505 22975714 + MGP_NODShiLtJ_P0045450 Gm9805 protein_coding protein_coding MGP_NODShiLtJ_T0045693.1 MGP_NODShiLtJ_G0023140.1 mouse_genomes_project 17 25349081 25356377 + MGP_NODShiLtJ_P0045693 Msrb1 protein_coding protein_coding MGP_NODShiLtJ_T0045694.1 MGP_NODShiLtJ_G0023140.1 mouse_genomes_project 17 25349121 25356370 + MGP_NODShiLtJ_P0045694 Msrb1 protein_coding protein_coding MGP_NODShiLtJ_T0046082.1 MGP_NODShiLtJ_G0023231.1 mouse_genomes_project 17 27832720 27845407 - MGP_NODShiLtJ_P0046082 Bak1 protein_coding protein_coding MGP_NODShiLtJ_T0046083.1 MGP_NODShiLtJ_G0023231.1 mouse_genomes_project 17 27832722 27844976 - MGP_NODShiLtJ_P0046083 Bak1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046084.1 MGP_NODShiLtJ_G0023231.1 mouse_genomes_project 17 27833576 27837797 - MGP_NODShiLtJ_P0046084 Bak1 protein_coding protein_coding MGP_NODShiLtJ_T0046085.1 MGP_NODShiLtJ_G0023231.1 mouse_genomes_project 17 27837586 27844985 - Bak1 protein_coding processed_transcript MGP_NODShiLtJ_T0101687.1 MGP_NODShiLtJ_G0039856.1 mouse_genomes_project 17 17783103 18435120 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047482.1 MGP_NODShiLtJ_G0023607.1 mouse_genomes_project 17 48387636 48490051 + MGP_NODShiLtJ_P0047482 Clic5 protein_coding protein_coding MGP_NODShiLtJ_T0045451.1 MGP_NODShiLtJ_G0023069.1 mouse_genomes_project 17 23027133 23044351 + MGP_NODShiLtJ_P0045451 Gm5493 protein_coding protein_coding MGP_NODShiLtJ_T0101754.1 MGP_NODShiLtJ_G0039922.1 mouse_genomes_project 17 38965094 38965422 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045448.1 MGP_NODShiLtJ_G0023066.1 mouse_genomes_project 17 22587955 22627222 + MGP_NODShiLtJ_P0045448 Zfp758 protein_coding protein_coding MGP_NODShiLtJ_T0045154.1 MGP_NODShiLtJ_G0022949.1 mouse_genomes_project 17 4973768 4982856 + MGP_NODShiLtJ_P0045154 protein_coding protein_coding MGP_NODShiLtJ_T0098987.1 MGP_NODShiLtJ_G0037381.1 mouse_genomes_project 17 14326116 14326223 - Gm25598 snRNA snRNA MGP_NODShiLtJ_T0046585.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35304909 35343340 - MGP_NODShiLtJ_P0046585 March2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046586.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35304929 35343315 - MGP_NODShiLtJ_P0046586 March2 protein_coding protein_coding MGP_NODShiLtJ_T0046587.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35305030 35343315 - MGP_NODShiLtJ_P0046587 March2 protein_coding protein_coding MGP_NODShiLtJ_T0046588.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35311940 35343323 - MGP_NODShiLtJ_P0046588 March2 protein_coding protein_coding MGP_NODShiLtJ_T0046589.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35311940 35343310 - MGP_NODShiLtJ_P0046589 March2 protein_coding protein_coding MGP_NODShiLtJ_T0046590.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35312264 35323559 - MGP_NODShiLtJ_P0046590 March2 protein_coding protein_coding MGP_NODShiLtJ_T0046591.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35314638 35343327 - MGP_NODShiLtJ_P0046591 March2 protein_coding protein_coding MGP_NODShiLtJ_T0046592.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35316447 35343261 - MGP_NODShiLtJ_P0046592 March2 protein_coding protein_coding MGP_NODShiLtJ_T0046593.1 MGP_NODShiLtJ_G0023354.1 mouse_genomes_project 17 35323496 35333627 - MGP_NODShiLtJ_P0046593 March2 protein_coding protein_coding MGP_NODShiLtJ_T0046939.1 MGP_NODShiLtJ_G0023422.1 mouse_genomes_project 17 36832727 36837391 + MGP_NODShiLtJ_P0046939 Neu1 protein_coding protein_coding MGP_NODShiLtJ_T0046940.1 MGP_NODShiLtJ_G0023422.1 mouse_genomes_project 17 36832788 36837418 + Neu1 protein_coding retained_intron MGP_NODShiLtJ_T0046941.1 MGP_NODShiLtJ_G0023422.1 mouse_genomes_project 17 36833336 36834235 + Neu1 protein_coding retained_intron MGP_NODShiLtJ_T0006848.1 MGP_NODShiLtJ_G0005633.1 mouse_genomes_project 17 24214215 24222312 + 9530082P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0006849.1 MGP_NODShiLtJ_G0005633.1 mouse_genomes_project 17 24220638 24225470 + 9530082P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0006850.1 MGP_NODShiLtJ_G0005633.1 mouse_genomes_project 17 24220739 24222604 + 9530082P21Rik lincRNA lincRNA MGP_NODShiLtJ_T0099017.1 MGP_NODShiLtJ_G0037411.1 mouse_genomes_project 17 94743508 94743617 + Gm26066 snRNA snRNA MGP_NODShiLtJ_T0047906.1 MGP_NODShiLtJ_G0023720.1 mouse_genomes_project 17 61349235 61424920 - MGP_NODShiLtJ_P0047906 Pot1b protein_coding protein_coding MGP_NODShiLtJ_T0047648.1 MGP_NODShiLtJ_G0023642.1 mouse_genomes_project 17 50945299 50948129 + MGP_NODShiLtJ_P0047648 Dnph1 protein_coding protein_coding MGP_NODShiLtJ_T0047927.1 MGP_NODShiLtJ_G0023732.1 mouse_genomes_project 17 61843859 61851843 - MGP_NODShiLtJ_P0047927 Ubxn6 protein_coding protein_coding MGP_NODShiLtJ_T0047928.1 MGP_NODShiLtJ_G0023732.1 mouse_genomes_project 17 61845064 61851832 - Ubxn6 protein_coding retained_intron MGP_NODShiLtJ_T0047929.1 MGP_NODShiLtJ_G0023732.1 mouse_genomes_project 17 61845064 61849047 - Ubxn6 protein_coding retained_intron MGP_NODShiLtJ_T0047930.1 MGP_NODShiLtJ_G0023732.1 mouse_genomes_project 17 61845350 61846249 - Ubxn6 protein_coding retained_intron MGP_NODShiLtJ_T0047931.1 MGP_NODShiLtJ_G0023732.1 mouse_genomes_project 17 61846452 61849255 - Ubxn6 protein_coding processed_transcript MGP_NODShiLtJ_T0047932.1 MGP_NODShiLtJ_G0023732.1 mouse_genomes_project 17 61846932 61851663 - Ubxn6 protein_coding retained_intron MGP_NODShiLtJ_T0047933.1 MGP_NODShiLtJ_G0023732.1 mouse_genomes_project 17 61847458 61851362 - MGP_NODShiLtJ_P0047933 Ubxn6 protein_coding protein_coding MGP_NODShiLtJ_T0047388.1 MGP_NODShiLtJ_G0023543.1 mouse_genomes_project 17 39981254 40051653 - MGP_NODShiLtJ_P0047388 Olfr116 protein_coding protein_coding MGP_NODShiLtJ_T0010082.1 MGP_NODShiLtJ_G0008215.1 mouse_genomes_project 17 24788691 24788754 - Mir6965 miRNA miRNA MGP_NODShiLtJ_T0047742.1 MGP_NODShiLtJ_G0023675.1 mouse_genomes_project 17 52199422 52262139 + MGP_NODShiLtJ_P0047742 Usp49 protein_coding protein_coding MGP_NODShiLtJ_T0047743.1 MGP_NODShiLtJ_G0023675.1 mouse_genomes_project 17 52220564 52246553 + MGP_NODShiLtJ_P0047743 Usp49 protein_coding protein_coding MGP_NODShiLtJ_T0047744.1 MGP_NODShiLtJ_G0023675.1 mouse_genomes_project 17 52247088 52255425 + MGP_NODShiLtJ_P0047744 Usp49 protein_coding protein_coding MGP_NODShiLtJ_T0047745.1 MGP_NODShiLtJ_G0023675.1 mouse_genomes_project 17 52247669 52255097 + MGP_NODShiLtJ_P0047745 Usp49 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047395.1 MGP_NODShiLtJ_G0023550.1 mouse_genomes_project 17 40192240 40218982 + MGP_NODShiLtJ_P0047395 protein_coding protein_coding MGP_NODShiLtJ_T0048373.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93774452 93876441 + MGP_NODShiLtJ_P0048373 Mta3 protein_coding protein_coding MGP_NODShiLtJ_T0048374.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93774452 93863888 + MGP_NODShiLtJ_P0048374 Mta3 protein_coding protein_coding MGP_NODShiLtJ_T0048375.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93774452 93863890 + MGP_NODShiLtJ_P0048375 Mta3 protein_coding protein_coding MGP_NODShiLtJ_T0048376.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93774473 93893073 + MGP_NODShiLtJ_P0048376 Mta3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048377.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93774480 93886261 + MGP_NODShiLtJ_P0048377 Mta3 protein_coding protein_coding MGP_NODShiLtJ_T0048378.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93774547 93895233 + MGP_NODShiLtJ_P0048378 Mta3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048379.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93800377 93824903 + Mta3 protein_coding processed_transcript MGP_NODShiLtJ_T0048380.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93826668 93871257 + MGP_NODShiLtJ_P0048380 Mta3 protein_coding protein_coding MGP_NODShiLtJ_T0048381.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93855348 93891773 + MGP_NODShiLtJ_P0048381 Mta3 protein_coding protein_coding MGP_NODShiLtJ_T0048382.1 MGP_NODShiLtJ_G0023896.1 mouse_genomes_project 17 93866436 93875615 + Mta3 protein_coding processed_transcript MGP_NODShiLtJ_T0047254.1 MGP_NODShiLtJ_G0023489.1 mouse_genomes_project 17 38101104 38117404 + MGP_NODShiLtJ_P0047254 protein_coding protein_coding MGP_NODShiLtJ_T0047507.1 MGP_NODShiLtJ_G0023615.1 mouse_genomes_project 17 49878345 49885841 + MGP_NODShiLtJ_P0047507 Nfkbie protein_coding protein_coding MGP_NODShiLtJ_T0045705.1 MGP_NODShiLtJ_G0023147.1 mouse_genomes_project 17 25508783 25514154 + MGP_NODShiLtJ_P0045705 Spsb3 protein_coding protein_coding MGP_NODShiLtJ_T0045706.1 MGP_NODShiLtJ_G0023147.1 mouse_genomes_project 17 25508811 25512603 + MGP_NODShiLtJ_P0045706 Spsb3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045707.1 MGP_NODShiLtJ_G0023147.1 mouse_genomes_project 17 25508846 25514144 + MGP_NODShiLtJ_P0045707 Spsb3 protein_coding protein_coding MGP_NODShiLtJ_T0045708.1 MGP_NODShiLtJ_G0023147.1 mouse_genomes_project 17 25508868 25514159 + Spsb3 protein_coding retained_intron MGP_NODShiLtJ_T0045709.1 MGP_NODShiLtJ_G0023147.1 mouse_genomes_project 17 25509258 25514156 + MGP_NODShiLtJ_P0045709 Spsb3 protein_coding protein_coding MGP_NODShiLtJ_T0045710.1 MGP_NODShiLtJ_G0023147.1 mouse_genomes_project 17 25509883 25514157 + MGP_NODShiLtJ_P0045710 Spsb3 protein_coding protein_coding MGP_NODShiLtJ_T0045711.1 MGP_NODShiLtJ_G0023147.1 mouse_genomes_project 17 25509955 25512447 + MGP_NODShiLtJ_P0045711 Spsb3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048301.1 MGP_NODShiLtJ_G0023861.1 mouse_genomes_project 17 88303135 88315863 + MGP_NODShiLtJ_P0048301 Gpatch11 protein_coding protein_coding MGP_NODShiLtJ_T0046660.1 MGP_NODShiLtJ_G0023367.1 mouse_genomes_project 17 35622774 35624296 - MGP_NODShiLtJ_P0046660 Pfdn6 protein_coding protein_coding MGP_NODShiLtJ_T0046661.1 MGP_NODShiLtJ_G0023367.1 mouse_genomes_project 17 35622863 35624283 - MGP_NODShiLtJ_P0046661 Pfdn6 protein_coding protein_coding MGP_NODShiLtJ_T0046662.1 MGP_NODShiLtJ_G0023367.1 mouse_genomes_project 17 35622872 35624278 - MGP_NODShiLtJ_P0046662 Pfdn6 protein_coding protein_coding MGP_NODShiLtJ_T0046663.1 MGP_NODShiLtJ_G0023367.1 mouse_genomes_project 17 35622876 35624258 - MGP_NODShiLtJ_P0046663 Pfdn6 protein_coding protein_coding MGP_NODShiLtJ_T0046664.1 MGP_NODShiLtJ_G0023367.1 mouse_genomes_project 17 35622899 35624283 - MGP_NODShiLtJ_P0046664 Pfdn6 protein_coding protein_coding MGP_NODShiLtJ_T0046665.1 MGP_NODShiLtJ_G0023367.1 mouse_genomes_project 17 35623311 35623773 - Pfdn6 protein_coding retained_intron MGP_NODShiLtJ_T0045301.1 MGP_NODShiLtJ_G0022993.1 mouse_genomes_project 17 13361359 13378865 - MGP_NODShiLtJ_P0045301 Phf10 protein_coding protein_coding MGP_NODShiLtJ_T0045302.1 MGP_NODShiLtJ_G0022993.1 mouse_genomes_project 17 13361364 13363179 - Phf10 protein_coding retained_intron MGP_NODShiLtJ_T0045303.1 MGP_NODShiLtJ_G0022993.1 mouse_genomes_project 17 13362916 13369057 - Phf10 protein_coding retained_intron MGP_NODShiLtJ_T0045304.1 MGP_NODShiLtJ_G0022993.1 mouse_genomes_project 17 13364088 13378865 - MGP_NODShiLtJ_P0045304 Phf10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045305.1 MGP_NODShiLtJ_G0022993.1 mouse_genomes_project 17 13373227 13377164 - Phf10 protein_coding retained_intron MGP_NODShiLtJ_T0046376.1 MGP_NODShiLtJ_G0023298.1 mouse_genomes_project 17 32414182 32418589 - MGP_NODShiLtJ_P0046376 Tff3 protein_coding protein_coding MGP_NODShiLtJ_T0011312.1 MGP_NODShiLtJ_G0009445.1 mouse_genomes_project 17 33427412 33427683 + Gm25883 misc_RNA misc_RNA MGP_NODShiLtJ_T0013177.1 MGP_NODShiLtJ_G0011285.1 mouse_genomes_project 17 91521402 91521781 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006923.1 MGP_NODShiLtJ_G0005687.1 mouse_genomes_project 17 88844270 88847598 + Gm17315 lincRNA lincRNA MGP_NODShiLtJ_T0101702.1 MGP_NODShiLtJ_G0039871.1 mouse_genomes_project 17 21017812 21020585 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048339.1 MGP_NODShiLtJ_G0023876.1 mouse_genomes_project 17 89696472 89755429 + MGP_NODShiLtJ_P0048339 Galm protein_coding protein_coding MGP_NODShiLtJ_T0048340.1 MGP_NODShiLtJ_G0023876.1 mouse_genomes_project 17 89714155 89753849 + MGP_NODShiLtJ_P0048340 Galm protein_coding protein_coding MGP_NODShiLtJ_T0048035.1 MGP_NODShiLtJ_G0023775.1 mouse_genomes_project 17 62952060 62961422 - MGP_NODShiLtJ_P0048035 Tubb4a protein_coding protein_coding MGP_NODShiLtJ_T0045446.1 MGP_NODShiLtJ_G0023064.1 mouse_genomes_project 17 22124171 22124978 - MGP_NODShiLtJ_P0045446 Gm9772 protein_coding protein_coding MGP_NODShiLtJ_T0048370.1 MGP_NODShiLtJ_G0023894.1 mouse_genomes_project 17 93512863 93526281 - MGP_NODShiLtJ_P0048370 Cox7a2l protein_coding protein_coding MGP_NODShiLtJ_T0048371.1 MGP_NODShiLtJ_G0023894.1 mouse_genomes_project 17 93512863 93526281 - MGP_NODShiLtJ_P0048371 Cox7a2l protein_coding protein_coding MGP_NODShiLtJ_T0047480.1 MGP_NODShiLtJ_G0023606.1 mouse_genomes_project 17 48298294 48307770 - MGP_NODShiLtJ_P0047480 Enpp4 protein_coding protein_coding MGP_NODShiLtJ_T0047481.1 MGP_NODShiLtJ_G0023606.1 mouse_genomes_project 17 48298302 48307725 - MGP_NODShiLtJ_P0047481 Enpp4 protein_coding protein_coding MGP_NODShiLtJ_T0045390.1 MGP_NODShiLtJ_G0023027.1 mouse_genomes_project 17 20047434 20077309 - MGP_NODShiLtJ_P0045390 protein_coding protein_coding MGP_NODShiLtJ_T0017417.1 MGP_NODShiLtJ_G0015211.1 mouse_genomes_project 17 26232606 26236843 + 2810468N07Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0098995.1 MGP_NODShiLtJ_G0037389.1 mouse_genomes_project 17 35643446 35643551 + Gm23111 snRNA snRNA MGP_NODShiLtJ_T0101736.1 MGP_NODShiLtJ_G0039904.1 mouse_genomes_project 17 38178247 38178476 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010111.1 MGP_NODShiLtJ_G0008244.1 mouse_genomes_project 17 37187532 37187649 + Mir8094 miRNA miRNA MGP_NODShiLtJ_T0048233.1 MGP_NODShiLtJ_G0023836.1 mouse_genomes_project 17 80131943 80928146 - MGP_NODShiLtJ_P0048233 Alk protein_coding protein_coding MGP_NODShiLtJ_T0047949.1 MGP_NODShiLtJ_G0023743.1 mouse_genomes_project 17 62069534 62084503 - MGP_NODShiLtJ_P0047949 Plin3 protein_coding protein_coding MGP_NODShiLtJ_T0006881.1 MGP_NODShiLtJ_G0005659.1 mouse_genomes_project 17 36457925 36461059 - Gm20461 lincRNA lincRNA MGP_NODShiLtJ_T0046992.1 MGP_NODShiLtJ_G0023433.1 mouse_genomes_project 17 36983833 36987325 - MGP_NODShiLtJ_P0046992 G6b protein_coding protein_coding MGP_NODShiLtJ_T0046993.1 MGP_NODShiLtJ_G0023433.1 mouse_genomes_project 17 36985472 36987311 - MGP_NODShiLtJ_P0046993 G6b protein_coding protein_coding MGP_NODShiLtJ_T0046027.1 MGP_NODShiLtJ_G0023216.1 mouse_genomes_project 17 27016861 27017644 - MGP_NODShiLtJ_P0046027 protein_coding protein_coding MGP_NODShiLtJ_T0046029.1 MGP_NODShiLtJ_G0023216.1 mouse_genomes_project 17 27016902 27017508 - protein_coding retained_intron MGP_NODShiLtJ_T0047946.1 MGP_NODShiLtJ_G0023740.1 mouse_genomes_project 17 61968807 62003723 - MGP_NODShiLtJ_P0047946 Dpp9 protein_coding protein_coding MGP_NODShiLtJ_T0000978.1 MGP_NODShiLtJ_G0000904.1 mouse_genomes_project 17 99040874 99041055 + TEC TEC MGP_NODShiLtJ_T0048291.1 MGP_NODShiLtJ_G0023855.1 mouse_genomes_project 17 84214122 84228982 - MGP_NODShiLtJ_P0048291 Fam98a protein_coding protein_coding MGP_NODShiLtJ_T0048292.1 MGP_NODShiLtJ_G0023855.1 mouse_genomes_project 17 84216067 84217609 - Fam98a protein_coding retained_intron MGP_NODShiLtJ_T0048293.1 MGP_NODShiLtJ_G0023855.1 mouse_genomes_project 17 84221503 84228832 - Fam98a protein_coding retained_intron MGP_NODShiLtJ_T0047414.1 MGP_NODShiLtJ_G0023567.1 mouse_genomes_project 17 40869402 40874400 + MGP_NODShiLtJ_P0047414 Olfr138 protein_coding protein_coding MGP_NODShiLtJ_T0047415.1 MGP_NODShiLtJ_G0023567.1 mouse_genomes_project 17 40869412 40873830 + MGP_NODShiLtJ_P0047415 Olfr138 protein_coding protein_coding MGP_NODShiLtJ_T0047416.1 MGP_NODShiLtJ_G0023567.1 mouse_genomes_project 17 40873461 40874400 + MGP_NODShiLtJ_P0047416 Olfr138 protein_coding protein_coding MGP_NODShiLtJ_T0045995.1 MGP_NODShiLtJ_G0023212.1 mouse_genomes_project 17 26913149 26918067 - MGP_NODShiLtJ_P0045995 Arhgdig protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045997.1 MGP_NODShiLtJ_G0023212.1 mouse_genomes_project 17 26916106 26918274 - MGP_NODShiLtJ_P0045997 Arhgdig protein_coding protein_coding MGP_NODShiLtJ_T0045998.1 MGP_NODShiLtJ_G0023212.1 mouse_genomes_project 17 26916320 26918293 - MGP_NODShiLtJ_P0045998 Arhgdig protein_coding protein_coding MGP_NODShiLtJ_T0045999.1 MGP_NODShiLtJ_G0023212.1 mouse_genomes_project 17 26916359 26924702 - Arhgdig protein_coding processed_transcript MGP_NODShiLtJ_T0046000.1 MGP_NODShiLtJ_G0023212.1 mouse_genomes_project 17 26916414 26918068 - Arhgdig protein_coding retained_intron MGP_NODShiLtJ_T0006903.1 MGP_NODShiLtJ_G0005674.1 mouse_genomes_project 17 55082394 55089464 + AY702103 lincRNA lincRNA MGP_NODShiLtJ_T0006904.1 MGP_NODShiLtJ_G0005674.1 mouse_genomes_project 17 55082590 55084711 + AY702103 lincRNA lincRNA MGP_NODShiLtJ_T0045382.1 MGP_NODShiLtJ_G0023019.1 mouse_genomes_project 17 18904019 18924722 + MGP_NODShiLtJ_P0045382 Vmn2r99 protein_coding protein_coding MGP_NODShiLtJ_T0010120.1 MGP_NODShiLtJ_G0008253.1 mouse_genomes_project 17 62030165 62030276 + Mir7b miRNA miRNA MGP_NODShiLtJ_T0047257.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38180633 38186125 - MGP_NODShiLtJ_P0047257 H2-T3 protein_coding protein_coding MGP_NODShiLtJ_T0047258.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38180634 38186192 - MGP_NODShiLtJ_P0047258 H2-T3 protein_coding protein_coding MGP_NODShiLtJ_T0047259.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38180740 38186156 - H2-T3 protein_coding retained_intron MGP_NODShiLtJ_T0047260.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38180749 38186039 - MGP_NODShiLtJ_P0047260 H2-T3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047261.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38182562 38186027 - H2-T3 protein_coding retained_intron MGP_NODShiLtJ_T0047262.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38182562 38186027 - MGP_NODShiLtJ_P0047262 H2-T3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047263.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38182562 38186027 - MGP_NODShiLtJ_P0047263 H2-T3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047264.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38182565 38186027 - MGP_NODShiLtJ_P0047264 H2-T3 protein_coding protein_coding MGP_NODShiLtJ_T0047265.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38182574 38186027 - MGP_NODShiLtJ_P0047265 H2-T3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047266.1 MGP_NODShiLtJ_G0023492.1 mouse_genomes_project 17 38182574 38186027 - MGP_NODShiLtJ_P0047266 H2-T3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046390.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716276 32814256 + MGP_NODShiLtJ_P0046390 Pde9a protein_coding protein_coding MGP_NODShiLtJ_T0046391.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716291 32814102 + MGP_NODShiLtJ_P0046391 Pde9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046392.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716291 32814102 + MGP_NODShiLtJ_P0046392 Pde9a protein_coding protein_coding MGP_NODShiLtJ_T0046393.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716291 32814102 + MGP_NODShiLtJ_P0046393 Pde9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046394.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716296 32814105 + MGP_NODShiLtJ_P0046394 Pde9a protein_coding protein_coding MGP_NODShiLtJ_T0046395.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716304 32814027 + MGP_NODShiLtJ_P0046395 Pde9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046396.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716316 32814105 + MGP_NODShiLtJ_P0046396 Pde9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046397.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716318 32808611 + Pde9a protein_coding retained_intron MGP_NODShiLtJ_T0046398.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32716336 32792027 + MGP_NODShiLtJ_P0046398 Pde9a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046399.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32767766 32796038 + MGP_NODShiLtJ_P0046399 Pde9a protein_coding protein_coding MGP_NODShiLtJ_T0046400.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32779115 32797100 + Pde9a protein_coding retained_intron MGP_NODShiLtJ_T0046401.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32789660 32798610 + Pde9a protein_coding retained_intron MGP_NODShiLtJ_T0046402.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32798537 32814087 + MGP_NODShiLtJ_P0046402 Pde9a protein_coding protein_coding MGP_NODShiLtJ_T0046403.1 MGP_NODShiLtJ_G0023305.1 mouse_genomes_project 17 32807856 32814052 + Pde9a protein_coding processed_transcript MGP_NODShiLtJ_T0047290.1 MGP_NODShiLtJ_G0023503.1 mouse_genomes_project 17 38868620 38872001 - MGP_NODShiLtJ_P0047290 H2-M9 protein_coding protein_coding MGP_NODShiLtJ_T0047291.1 MGP_NODShiLtJ_G0023503.1 mouse_genomes_project 17 38869741 38872001 - MGP_NODShiLtJ_P0047291 H2-M9 protein_coding protein_coding MGP_NODShiLtJ_T0047542.1 MGP_NODShiLtJ_G0023619.1 mouse_genomes_project 17 49931221 49932357 - MGP_NODShiLtJ_P0047542 Gm7325 protein_coding protein_coding MGP_NODShiLtJ_T0047543.1 MGP_NODShiLtJ_G0023619.1 mouse_genomes_project 17 49931221 49932322 - MGP_NODShiLtJ_P0047543 Gm7325 protein_coding protein_coding MGP_NODShiLtJ_T0047544.1 MGP_NODShiLtJ_G0023619.1 mouse_genomes_project 17 49931221 49932170 - MGP_NODShiLtJ_P0047544 Gm7325 protein_coding protein_coding MGP_NODShiLtJ_T0045698.1 MGP_NODShiLtJ_G0023144.1 mouse_genomes_project 17 25471414 25475225 + MGP_NODShiLtJ_P0045698 Hagh protein_coding protein_coding MGP_NODShiLtJ_T0045699.1 MGP_NODShiLtJ_G0023144.1 mouse_genomes_project 17 25471417 25485290 + MGP_NODShiLtJ_P0045699 Hagh protein_coding protein_coding MGP_NODShiLtJ_T0045700.1 MGP_NODShiLtJ_G0023144.1 mouse_genomes_project 17 25471431 25485293 + MGP_NODShiLtJ_P0045700 Hagh protein_coding protein_coding MGP_NODShiLtJ_T0045701.1 MGP_NODShiLtJ_G0023144.1 mouse_genomes_project 17 25471505 25482080 + MGP_NODShiLtJ_P0045701 Hagh protein_coding protein_coding MGP_NODShiLtJ_T0045702.1 MGP_NODShiLtJ_G0023144.1 mouse_genomes_project 17 25479261 25485447 + Hagh protein_coding processed_transcript MGP_NODShiLtJ_T0046001.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919873 26928028 + Rgs11 protein_coding processed_transcript MGP_NODShiLtJ_T0046002.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919880 26928032 + MGP_NODShiLtJ_P0046002 Rgs11 protein_coding protein_coding MGP_NODShiLtJ_T0046003.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919884 26928037 + MGP_NODShiLtJ_P0046003 Rgs11 protein_coding protein_coding MGP_NODShiLtJ_T0046004.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919885 26920755 + Rgs11 protein_coding retained_intron MGP_NODShiLtJ_T0046005.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919887 26920558 + Rgs11 protein_coding retained_intron MGP_NODShiLtJ_T0046006.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919898 26928030 + Rgs11 protein_coding retained_intron MGP_NODShiLtJ_T0046007.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919902 26920897 + Rgs11 protein_coding retained_intron MGP_NODShiLtJ_T0046008.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919924 26923722 + Rgs11 protein_coding retained_intron MGP_NODShiLtJ_T0046009.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26919934 26921019 + Rgs11 protein_coding retained_intron MGP_NODShiLtJ_T0046010.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26924369 26928030 + Rgs11 protein_coding retained_intron MGP_NODShiLtJ_T0046011.1 MGP_NODShiLtJ_G0023213.1 mouse_genomes_project 17 26924757 26928028 + Rgs11 protein_coding retained_intron MGP_NODShiLtJ_T0047095.1 MGP_NODShiLtJ_G0023461.1 mouse_genomes_project 17 37497245 37502161 - MGP_NODShiLtJ_P0047095 Tcf19 protein_coding protein_coding MGP_NODShiLtJ_T0047096.1 MGP_NODShiLtJ_G0023461.1 mouse_genomes_project 17 37497248 37502122 - MGP_NODShiLtJ_P0047096 Tcf19 protein_coding protein_coding MGP_NODShiLtJ_T0047097.1 MGP_NODShiLtJ_G0023461.1 mouse_genomes_project 17 37499151 37502157 - MGP_NODShiLtJ_P0047097 Tcf19 protein_coding protein_coding MGP_NODShiLtJ_T0047098.1 MGP_NODShiLtJ_G0023461.1 mouse_genomes_project 17 37499315 37501045 - MGP_NODShiLtJ_P0047098 Tcf19 protein_coding protein_coding MGP_NODShiLtJ_T0047405.1 MGP_NODShiLtJ_G0023560.1 mouse_genomes_project 17 40619547 40620540 - MGP_NODShiLtJ_P0047405 Olfr129 protein_coding protein_coding MGP_NODShiLtJ_T0101708.1 MGP_NODShiLtJ_G0039877.1 mouse_genomes_project 17 23322410 23324828 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101730.1 MGP_NODShiLtJ_G0039899.1 mouse_genomes_project 17 37312882 37313866 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003666.1 MGP_NODShiLtJ_G0003301.1 mouse_genomes_project 17 24242799 24248665 + Gm16275 antisense antisense MGP_NODShiLtJ_T0048007.1 MGP_NODShiLtJ_G0023761.1 mouse_genomes_project 17 62619359 62677128 - MGP_NODShiLtJ_P0048007 Rfx2 protein_coding protein_coding MGP_NODShiLtJ_T0048008.1 MGP_NODShiLtJ_G0023761.1 mouse_genomes_project 17 62619359 62677128 - MGP_NODShiLtJ_P0048008 Rfx2 protein_coding protein_coding MGP_NODShiLtJ_T0045442.1 MGP_NODShiLtJ_G0023063.1 mouse_genomes_project 17 22078126 22109883 + MGP_NODShiLtJ_P0045442 Zfp943 protein_coding protein_coding MGP_NODShiLtJ_T0045443.1 MGP_NODShiLtJ_G0023063.1 mouse_genomes_project 17 22078133 22106391 + MGP_NODShiLtJ_P0045443 Zfp943 protein_coding protein_coding MGP_NODShiLtJ_T0045444.1 MGP_NODShiLtJ_G0023063.1 mouse_genomes_project 17 22078160 22224656 + MGP_NODShiLtJ_P0045444 Zfp943 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045445.1 MGP_NODShiLtJ_G0023063.1 mouse_genomes_project 17 22123984 22129875 + Zfp943 protein_coding processed_transcript MGP_NODShiLtJ_T0006891.1 MGP_NODShiLtJ_G0005667.1 mouse_genomes_project 17 40329221 40331758 + Gm20524 lincRNA lincRNA MGP_NODShiLtJ_T0046551.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35141400 35171935 + MGP_NODShiLtJ_P0046551 Adamts10 protein_coding protein_coding MGP_NODShiLtJ_T0046552.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35141400 35171935 + MGP_NODShiLtJ_P0046552 Adamts10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046553.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35141405 35171934 + MGP_NODShiLtJ_P0046553 Adamts10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046554.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35141406 35146351 + Adamts10 protein_coding retained_intron MGP_NODShiLtJ_T0046555.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35141422 35171935 + MGP_NODShiLtJ_P0046555 Adamts10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046556.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35145500 35171615 + MGP_NODShiLtJ_P0046556 Adamts10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046557.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35145500 35171615 + MGP_NODShiLtJ_P0046557 Adamts10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046558.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35148802 35171934 + MGP_NODShiLtJ_P0046558 Adamts10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046559.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35148911 35160652 + Adamts10 protein_coding processed_transcript MGP_NODShiLtJ_T0046560.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35154528 35171935 + Adamts10 protein_coding retained_intron MGP_NODShiLtJ_T0046561.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35154911 35171937 + Adamts10 protein_coding retained_intron MGP_NODShiLtJ_T0046562.1 MGP_NODShiLtJ_G0023349.1 mouse_genomes_project 17 35160952 35171949 + Adamts10 protein_coding retained_intron MGP_NODShiLtJ_T0006883.1 MGP_NODShiLtJ_G0005661.1 mouse_genomes_project 17 37741384 37743458 - Gm20443 lincRNA lincRNA MGP_NODShiLtJ_T0048055.1 MGP_NODShiLtJ_G0023786.1 mouse_genomes_project 17 63639159 63639612 - MGP_NODShiLtJ_P0048055 Gm21834 protein_coding protein_coding MGP_NODShiLtJ_T0097781.1 MGP_NODShiLtJ_G0036193.1 mouse_genomes_project 17 87588150 87588508 - pseudogene pseudogene MGP_NODShiLtJ_T0045695.1 MGP_NODShiLtJ_G0023141.1 mouse_genomes_project 17 25369838 25377570 + MGP_NODShiLtJ_P0045695 Hs3st6 protein_coding protein_coding MGP_NODShiLtJ_T0013084.1 MGP_NODShiLtJ_G0011192.1 mouse_genomes_project 17 6285505 6290108 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045113.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3242072 3349101 + MGP_NODShiLtJ_P0045113 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045114.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3242072 3343339 + MGP_NODShiLtJ_P0045114 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045115.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3242121 3349936 + MGP_NODShiLtJ_P0045115 Synj2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045116.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3242146 3349101 + MGP_NODShiLtJ_P0045116 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045117.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3279024 3336836 + MGP_NODShiLtJ_P0045117 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045118.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3279079 3354836 + MGP_NODShiLtJ_P0045118 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045119.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3279178 3349101 + MGP_NODShiLtJ_P0045119 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045120.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3292698 3349887 + MGP_NODShiLtJ_P0045120 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045121.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3294775 3354836 + MGP_NODShiLtJ_P0045121 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045122.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3301220 3348874 + MGP_NODShiLtJ_P0045122 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045123.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3302050 3331171 + MGP_NODShiLtJ_P0045123 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045124.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3315173 3343475 + MGP_NODShiLtJ_P0045124 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045125.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3315190 3348952 + MGP_NODShiLtJ_P0045125 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045126.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3315205 3318084 + Synj2 protein_coding processed_transcript MGP_NODShiLtJ_T0045127.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3324284 3348919 + MGP_NODShiLtJ_P0045127 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045128.1 MGP_NODShiLtJ_G0022937.1 mouse_genomes_project 17 3335621 3348008 + MGP_NODShiLtJ_P0045128 Synj2 protein_coding protein_coding MGP_NODShiLtJ_T0045683.1 MGP_NODShiLtJ_G0023138.1 mouse_genomes_project 17 25333040 25333626 - Ndufb10 protein_coding retained_intron MGP_NODShiLtJ_T0045684.1 MGP_NODShiLtJ_G0023138.1 mouse_genomes_project 17 25333040 25333883 - Ndufb10 protein_coding retained_intron MGP_NODShiLtJ_T0045685.1 MGP_NODShiLtJ_G0023138.1 mouse_genomes_project 17 25333040 25335386 - Ndufb10 protein_coding retained_intron MGP_NODShiLtJ_T0045686.1 MGP_NODShiLtJ_G0023138.1 mouse_genomes_project 17 25333040 25335444 - MGP_NODShiLtJ_P0045686 Ndufb10 protein_coding protein_coding MGP_NODShiLtJ_T0045687.1 MGP_NODShiLtJ_G0023138.1 mouse_genomes_project 17 25333381 25335378 - MGP_NODShiLtJ_P0045687 Ndufb10 protein_coding protein_coding MGP_NODShiLtJ_T0045688.1 MGP_NODShiLtJ_G0023138.1 mouse_genomes_project 17 25333658 25335360 - Ndufb10 protein_coding processed_transcript MGP_NODShiLtJ_T0045425.1 MGP_NODShiLtJ_G0023053.1 mouse_genomes_project 17 21586588 21608067 + MGP_NODShiLtJ_P0045425 Zfp948 protein_coding protein_coding MGP_NODShiLtJ_T0046218.1 MGP_NODShiLtJ_G0023258.1 mouse_genomes_project 17 29379711 29480387 - MGP_NODShiLtJ_P0046218 Fkbp5 protein_coding protein_coding MGP_NODShiLtJ_T0046219.1 MGP_NODShiLtJ_G0023258.1 mouse_genomes_project 17 29379713 29520037 - MGP_NODShiLtJ_P0046219 Fkbp5 protein_coding protein_coding MGP_NODShiLtJ_T0046220.1 MGP_NODShiLtJ_G0023258.1 mouse_genomes_project 17 29379721 29520037 - MGP_NODShiLtJ_P0046220 Fkbp5 protein_coding protein_coding MGP_NODShiLtJ_T0046221.1 MGP_NODShiLtJ_G0023258.1 mouse_genomes_project 17 29383314 29416547 - Fkbp5 protein_coding processed_transcript MGP_NODShiLtJ_T0046222.1 MGP_NODShiLtJ_G0023258.1 mouse_genomes_project 17 29403922 29429647 - MGP_NODShiLtJ_P0046222 Fkbp5 protein_coding protein_coding MGP_NODShiLtJ_T0046223.1 MGP_NODShiLtJ_G0023258.1 mouse_genomes_project 17 29493431 29503499 - Fkbp5 protein_coding retained_intron MGP_NODShiLtJ_T0046133.1 MGP_NODShiLtJ_G0023243.1 mouse_genomes_project 17 28623441 28639286 - MGP_NODShiLtJ_P0046133 Spdef protein_coding protein_coding MGP_NODShiLtJ_T0046134.1 MGP_NODShiLtJ_G0023243.1 mouse_genomes_project 17 28623536 28639287 - MGP_NODShiLtJ_P0046134 Spdef protein_coding protein_coding MGP_NODShiLtJ_T0046135.1 MGP_NODShiLtJ_G0023243.1 mouse_genomes_project 17 28623538 28639225 - MGP_NODShiLtJ_P0046135 Spdef protein_coding protein_coding MGP_NODShiLtJ_T0046136.1 MGP_NODShiLtJ_G0023243.1 mouse_genomes_project 17 28623594 28626672 - Spdef protein_coding processed_transcript MGP_NODShiLtJ_T0046137.1 MGP_NODShiLtJ_G0023243.1 mouse_genomes_project 17 28629081 28639260 - MGP_NODShiLtJ_P0046137 Spdef protein_coding protein_coding MGP_NODShiLtJ_T0048447.1 MGP_NODShiLtJ_G0023923.1 mouse_genomes_project 17 97721565 97765148 - MGP_NODShiLtJ_P0048447 1700011E24Rik protein_coding protein_coding MGP_NODShiLtJ_T0048448.1 MGP_NODShiLtJ_G0023923.1 mouse_genomes_project 17 97721570 97765094 - MGP_NODShiLtJ_P0048448 1700011E24Rik protein_coding protein_coding MGP_NODShiLtJ_T0048449.1 MGP_NODShiLtJ_G0023923.1 mouse_genomes_project 17 97746416 97765115 - MGP_NODShiLtJ_P0048449 1700011E24Rik protein_coding protein_coding MGP_NODShiLtJ_T0048450.1 MGP_NODShiLtJ_G0023923.1 mouse_genomes_project 17 97752703 97765042 - 1700011E24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0048451.1 MGP_NODShiLtJ_G0023923.1 mouse_genomes_project 17 97752713 97765042 - 1700011E24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0046066.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27738586 27777855 + MGP_NODShiLtJ_P0046066 Syngap1 protein_coding protein_coding MGP_NODShiLtJ_T0046067.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27738775 27776003 + MGP_NODShiLtJ_P0046067 Syngap1 protein_coding protein_coding MGP_NODShiLtJ_T0046068.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27738785 27775963 + MGP_NODShiLtJ_P0046068 Syngap1 protein_coding protein_coding MGP_NODShiLtJ_T0046069.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27738832 27776543 + MGP_NODShiLtJ_P0046069 Syngap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046070.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27754946 27776355 + MGP_NODShiLtJ_P0046070 Syngap1 protein_coding protein_coding MGP_NODShiLtJ_T0046071.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27761683 27777855 + MGP_NODShiLtJ_P0046071 Syngap1 protein_coding protein_coding MGP_NODShiLtJ_T0046072.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27762139 27764425 + MGP_NODShiLtJ_P0046072 Syngap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046073.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27764151 27764869 + Syngap1 protein_coding retained_intron MGP_NODShiLtJ_T0046074.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27766619 27775984 + MGP_NODShiLtJ_P0046074 Syngap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046075.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27767325 27776013 + MGP_NODShiLtJ_P0046075 Syngap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046076.1 MGP_NODShiLtJ_G0023228.1 mouse_genomes_project 17 27767339 27776009 + MGP_NODShiLtJ_P0046076 Syngap1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047649.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50949078 50949583 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0047650.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50949113 51002118 - MGP_NODShiLtJ_P0047650 Cul9 protein_coding protein_coding MGP_NODShiLtJ_T0047651.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50949118 50970539 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0047652.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50949124 51002031 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0047653.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50950301 50975548 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0047654.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50968271 50972515 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0047655.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50969333 50970445 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0047656.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50969333 50974906 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0047657.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50979317 50992303 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0047658.1 MGP_NODShiLtJ_G0023643.1 mouse_genomes_project 17 50980743 50992563 - Cul9 protein_coding retained_intron MGP_NODShiLtJ_T0045618.1 MGP_NODShiLtJ_G0023121.1 mouse_genomes_project 17 25062128 25067648 - MGP_NODShiLtJ_P0045618 Mlst8 protein_coding protein_coding MGP_NODShiLtJ_T0045619.1 MGP_NODShiLtJ_G0023121.1 mouse_genomes_project 17 25062128 25067648 - MGP_NODShiLtJ_P0045619 Mlst8 protein_coding protein_coding MGP_NODShiLtJ_T0045447.1 MGP_NODShiLtJ_G0023065.1 mouse_genomes_project 17 22554504 22587935 - MGP_NODShiLtJ_P0045447 Zfp944 protein_coding protein_coding MGP_NODShiLtJ_T0013171.1 MGP_NODShiLtJ_G0011279.1 mouse_genomes_project 17 83814761 83815339 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045531.1 MGP_NODShiLtJ_G0023096.1 mouse_genomes_project 17 24348717 24353744 + MGP_NODShiLtJ_P0045531 Prss21 protein_coding protein_coding MGP_NODShiLtJ_T0101718.1 MGP_NODShiLtJ_G0039887.1 mouse_genomes_project 17 35647390 38175518 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101773.1 MGP_NODShiLtJ_G0039941.1 mouse_genomes_project 17 61587109 61587757 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045449.1 MGP_NODShiLtJ_G0023067.1 mouse_genomes_project 17 22680032 22710344 + protein_coding processed_transcript MGP_NODShiLtJ_T0047419.1 MGP_NODShiLtJ_G0023570.1 mouse_genomes_project 17 41680957 41686634 + MGP_NODShiLtJ_P0047419 protein_coding protein_coding MGP_NODShiLtJ_T0010084.1 MGP_NODShiLtJ_G0008217.1 mouse_genomes_project 17 25883683 25883771 - Mir3547 miRNA miRNA MGP_NODShiLtJ_T0003721.1 MGP_NODShiLtJ_G0003342.1 mouse_genomes_project 17 54640996 54645200 - Gm16555 antisense antisense MGP_NODShiLtJ_T0013160.1 MGP_NODShiLtJ_G0011268.1 mouse_genomes_project 17 59842750 59842891 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045540.1 MGP_NODShiLtJ_G0023101.1 mouse_genomes_project 17 24477376 24479079 - MGP_NODShiLtJ_P0045540 Sbp protein_coding protein_coding MGP_NODShiLtJ_T0013089.1 MGP_NODShiLtJ_G0011197.1 mouse_genomes_project 17 10226052 10226588 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098997.1 MGP_NODShiLtJ_G0037391.1 mouse_genomes_project 17 37699446 37699553 - Gm23864 snRNA snRNA MGP_NODShiLtJ_T0046093.1 MGP_NODShiLtJ_G0023234.1 mouse_genomes_project 17 27980538 28004050 - MGP_NODShiLtJ_P0046093 Ip6k3 protein_coding protein_coding MGP_NODShiLtJ_T0101750.1 MGP_NODShiLtJ_G0039918.1 mouse_genomes_project 17 38952702 38954283 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045385.1 MGP_NODShiLtJ_G0023022.1 mouse_genomes_project 17 19150258 19186295 + MGP_NODShiLtJ_P0045385 Vmn2r101 protein_coding protein_coding MGP_NODShiLtJ_T0048021.1 MGP_NODShiLtJ_G0023771.1 mouse_genomes_project 17 62892753 62909789 - MGP_NODShiLtJ_P0048021 Slc25a41 protein_coding protein_coding MGP_NODShiLtJ_T0048022.1 MGP_NODShiLtJ_G0023771.1 mouse_genomes_project 17 62892905 62909782 - MGP_NODShiLtJ_P0048022 Slc25a41 protein_coding protein_coding MGP_NODShiLtJ_T0101729.1 MGP_NODShiLtJ_G0039898.1 mouse_genomes_project 17 37250393 37252505 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006862.1 MGP_NODShiLtJ_G0005644.1 mouse_genomes_project 17 30096541 30100506 - lincRNA lincRNA MGP_NODShiLtJ_T0045164.1 MGP_NODShiLtJ_G0022955.1 mouse_genomes_project 17 5853070 5885552 + MGP_NODShiLtJ_P0045164 Fgfr1op protein_coding protein_coding MGP_NODShiLtJ_T0045165.1 MGP_NODShiLtJ_G0022955.1 mouse_genomes_project 17 5853089 5863649 + Fgfr1op protein_coding retained_intron MGP_NODShiLtJ_T0045166.1 MGP_NODShiLtJ_G0022955.1 mouse_genomes_project 17 5853109 5885223 + MGP_NODShiLtJ_P0045166 Fgfr1op protein_coding protein_coding MGP_NODShiLtJ_T0045167.1 MGP_NODShiLtJ_G0022955.1 mouse_genomes_project 17 5869755 5883693 + MGP_NODShiLtJ_P0045167 Fgfr1op protein_coding protein_coding MGP_NODShiLtJ_T0048140.1 MGP_NODShiLtJ_G0023815.1 mouse_genomes_project 17 76152841 76340563 + L3mbtl4 protein_coding retained_intron MGP_NODShiLtJ_T0048141.1 MGP_NODShiLtJ_G0023815.1 mouse_genomes_project 17 76152841 76533089 + MGP_NODShiLtJ_P0048141 L3mbtl4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048142.1 MGP_NODShiLtJ_G0023815.1 mouse_genomes_project 17 76152841 76544570 + MGP_NODShiLtJ_P0048142 L3mbtl4 protein_coding protein_coding MGP_NODShiLtJ_T0048143.1 MGP_NODShiLtJ_G0023815.1 mouse_genomes_project 17 76152841 76693329 + MGP_NODShiLtJ_P0048143 L3mbtl4 protein_coding protein_coding MGP_NODShiLtJ_T0101767.1 MGP_NODShiLtJ_G0039935.1 mouse_genomes_project 17 39804128 39806236 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101434.1 MGP_NODShiLtJ_G0039623.1 mouse_genomes_project 17 44499348 44514537 + unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0013180.1 MGP_NODShiLtJ_G0011288.1 mouse_genomes_project 17 95794041 95794381 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045773.1 MGP_NODShiLtJ_G0023158.1 mouse_genomes_project 17 25761458 25789844 + MGP_NODShiLtJ_P0045773 Clcn7 protein_coding protein_coding MGP_NODShiLtJ_T0045774.1 MGP_NODShiLtJ_G0023158.1 mouse_genomes_project 17 25761532 25774291 + Clcn7 protein_coding retained_intron MGP_NODShiLtJ_T0045775.1 MGP_NODShiLtJ_G0023158.1 mouse_genomes_project 17 25764673 25789838 + MGP_NODShiLtJ_P0045775 Clcn7 protein_coding protein_coding MGP_NODShiLtJ_T0045776.1 MGP_NODShiLtJ_G0023158.1 mouse_genomes_project 17 25773556 25778340 + MGP_NODShiLtJ_P0045776 Clcn7 protein_coding protein_coding MGP_NODShiLtJ_T0045777.1 MGP_NODShiLtJ_G0023158.1 mouse_genomes_project 17 25774063 25780154 + Clcn7 protein_coding processed_transcript MGP_NODShiLtJ_T0045778.1 MGP_NODShiLtJ_G0023158.1 mouse_genomes_project 17 25778927 25785653 + MGP_NODShiLtJ_P0045778 Clcn7 protein_coding protein_coding MGP_NODShiLtJ_T0045779.1 MGP_NODShiLtJ_G0023158.1 mouse_genomes_project 17 25786403 25787482 + Clcn7 protein_coding retained_intron MGP_NODShiLtJ_T0045229.1 MGP_NODShiLtJ_G0022970.1 mouse_genomes_project 17 10417886 10458524 + MGP_NODShiLtJ_P0045229 Plg protein_coding protein_coding MGP_NODShiLtJ_T0045162.1 MGP_NODShiLtJ_G0022953.1 mouse_genomes_project 17 5590159 5625773 + MGP_NODShiLtJ_P0045162 protein_coding protein_coding MGP_NODShiLtJ_T0101761.1 MGP_NODShiLtJ_G0039929.1 mouse_genomes_project 17 39731983 39732910 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003655.1 MGP_NODShiLtJ_G0003296.1 mouse_genomes_project 17 8397214 8475699 + Gm16168 antisense antisense MGP_NODShiLtJ_T0003656.1 MGP_NODShiLtJ_G0003296.1 mouse_genomes_project 17 8397221 8458335 + Gm16168 antisense antisense MGP_NODShiLtJ_T0045386.1 MGP_NODShiLtJ_G0023023.1 mouse_genomes_project 17 19234702 19289969 + MGP_NODShiLtJ_P0045386 Vmn2r102 protein_coding protein_coding MGP_NODShiLtJ_T0047646.1 MGP_NODShiLtJ_G0023641.1 mouse_genomes_project 17 50888661 50935919 - MGP_NODShiLtJ_P0047646 Ttbk1 protein_coding protein_coding MGP_NODShiLtJ_T0047647.1 MGP_NODShiLtJ_G0023641.1 mouse_genomes_project 17 50908227 50935685 - MGP_NODShiLtJ_P0047647 Ttbk1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047220.1 MGP_NODShiLtJ_G0023482.1 mouse_genomes_project 17 37949324 37950656 + Ppp1r10 protein_coding retained_intron MGP_NODShiLtJ_T0047221.1 MGP_NODShiLtJ_G0023482.1 mouse_genomes_project 17 37949456 37991176 + MGP_NODShiLtJ_P0047221 Ppp1r10 protein_coding protein_coding MGP_NODShiLtJ_T0047222.1 MGP_NODShiLtJ_G0023482.1 mouse_genomes_project 17 37949469 37950231 + Ppp1r10 protein_coding processed_transcript MGP_NODShiLtJ_T0047223.1 MGP_NODShiLtJ_G0023482.1 mouse_genomes_project 17 37949672 37951250 + Ppp1r10 protein_coding retained_intron MGP_NODShiLtJ_T0047224.1 MGP_NODShiLtJ_G0023482.1 mouse_genomes_project 17 37949888 37957229 + MGP_NODShiLtJ_P0047224 Ppp1r10 protein_coding protein_coding MGP_NODShiLtJ_T0047225.1 MGP_NODShiLtJ_G0023482.1 mouse_genomes_project 17 37950086 37991176 + MGP_NODShiLtJ_P0047225 Ppp1r10 protein_coding protein_coding MGP_NODShiLtJ_T0047226.1 MGP_NODShiLtJ_G0023482.1 mouse_genomes_project 17 37959429 37962142 + Ppp1r10 protein_coding retained_intron MGP_NODShiLtJ_T0048351.1 MGP_NODShiLtJ_G0023883.1 mouse_genomes_project 17 89967812 89968136 - MGP_NODShiLtJ_P0048351 Gm10190 protein_coding protein_coding MGP_NODShiLtJ_T0045566.1 MGP_NODShiLtJ_G0023109.1 mouse_genomes_project 17 24708221 24733874 - MGP_NODShiLtJ_P0045566 Gm43796 protein_coding protein_coding MGP_NODShiLtJ_T0013174.1 MGP_NODShiLtJ_G0011282.1 mouse_genomes_project 17 88129986 88134420 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047444.1 MGP_NODShiLtJ_G0023590.1 mouse_genomes_project 17 46320618 46531215 + MGP_NODShiLtJ_P0047444 Ptchd4 protein_coding protein_coding MGP_NODShiLtJ_T0047426.1 MGP_NODShiLtJ_G0023577.1 mouse_genomes_project 17 43771867 43823790 - MGP_NODShiLtJ_P0047426 protein_coding protein_coding MGP_NODShiLtJ_T0047381.1 MGP_NODShiLtJ_G0023539.1 mouse_genomes_project 17 39861666 39864367 - MGP_NODShiLtJ_P0047381 H2-M2 protein_coding protein_coding MGP_NODShiLtJ_T0047382.1 MGP_NODShiLtJ_G0023539.1 mouse_genomes_project 17 39861798 39864368 - MGP_NODShiLtJ_P0047382 H2-M2 protein_coding protein_coding MGP_NODShiLtJ_T0045180.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6015828 6033454 + Sft2d1 protein_coding retained_intron MGP_NODShiLtJ_T0045181.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6015828 6033454 + MGP_NODShiLtJ_P0045181 Sft2d1 protein_coding protein_coding MGP_NODShiLtJ_T0045182.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6015835 6100500 + Sft2d1 protein_coding processed_transcript MGP_NODShiLtJ_T0045183.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6015848 6033068 + MGP_NODShiLtJ_P0045183 Sft2d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045184.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6015865 6033021 + Sft2d1 protein_coding processed_transcript MGP_NODShiLtJ_T0045185.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6015895 6033452 + MGP_NODShiLtJ_P0045185 Sft2d1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045186.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6015901 6024191 + Sft2d1 protein_coding retained_intron MGP_NODShiLtJ_T0045187.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6024711 6030420 + Sft2d1 protein_coding retained_intron MGP_NODShiLtJ_T0045188.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6026530 6033075 + Sft2d1 protein_coding retained_intron MGP_NODShiLtJ_T0045189.1 MGP_NODShiLtJ_G0022958.1 mouse_genomes_project 17 6030342 6033452 + Sft2d1 protein_coding retained_intron MGP_NODShiLtJ_T0046225.1 MGP_NODShiLtJ_G0023260.1 mouse_genomes_project 17 29558139 29562356 + MGP_NODShiLtJ_P0046225 Clpsl2 protein_coding protein_coding MGP_NODShiLtJ_T0046262.1 MGP_NODShiLtJ_G0023270.1 mouse_genomes_project 17 30008156 30015321 - MGP_NODShiLtJ_P0046262 Pxt1 protein_coding protein_coding MGP_NODShiLtJ_T0046745.1 MGP_NODShiLtJ_G0023383.1 mouse_genomes_project 17 35906623 35908139 - Psmb9 protein_coding retained_intron MGP_NODShiLtJ_T0046746.1 MGP_NODShiLtJ_G0023383.1 mouse_genomes_project 17 35906626 35911943 - Psmb9 protein_coding retained_intron MGP_NODShiLtJ_T0046747.1 MGP_NODShiLtJ_G0023383.1 mouse_genomes_project 17 35906629 35911899 - MGP_NODShiLtJ_P0046747 Psmb9 protein_coding protein_coding MGP_NODShiLtJ_T0046748.1 MGP_NODShiLtJ_G0023383.1 mouse_genomes_project 17 35908619 35911928 - Psmb9 protein_coding retained_intron MGP_NODShiLtJ_T0046749.1 MGP_NODShiLtJ_G0023383.1 mouse_genomes_project 17 35908871 35911809 - MGP_NODShiLtJ_P0046749 Psmb9 protein_coding protein_coding MGP_NODShiLtJ_T0017403.1 MGP_NODShiLtJ_G0015206.1 mouse_genomes_project 17 11973708 11982865 - Gm16046 processed_transcript processed_transcript MGP_NODShiLtJ_T0017404.1 MGP_NODShiLtJ_G0015206.1 mouse_genomes_project 17 11977185 11982855 - Gm16046 processed_transcript processed_transcript MGP_NODShiLtJ_T0017405.1 MGP_NODShiLtJ_G0015206.1 mouse_genomes_project 17 11977658 11982884 - Gm16046 processed_transcript processed_transcript MGP_NODShiLtJ_T0045992.1 MGP_NODShiLtJ_G0023211.1 mouse_genomes_project 17 26912922 26916011 - MGP_NODShiLtJ_P0045992 Pdia2 protein_coding protein_coding MGP_NODShiLtJ_T0045993.1 MGP_NODShiLtJ_G0023211.1 mouse_genomes_project 17 26912929 26913840 - MGP_NODShiLtJ_P0045993 Pdia2 protein_coding protein_coding MGP_NODShiLtJ_T0045994.1 MGP_NODShiLtJ_G0023211.1 mouse_genomes_project 17 26912948 26915986 - MGP_NODShiLtJ_P0045994 Pdia2 protein_coding protein_coding MGP_NODShiLtJ_T0045996.1 MGP_NODShiLtJ_G0023211.1 mouse_genomes_project 17 26914417 26915932 - MGP_NODShiLtJ_P0045996 Pdia2 protein_coding protein_coding MGP_NODShiLtJ_T0010113.1 MGP_NODShiLtJ_G0008246.1 mouse_genomes_project 17 37950780 37950861 + Mir1894 miRNA miRNA MGP_NODShiLtJ_T0046077.1 MGP_NODShiLtJ_G0023229.1 mouse_genomes_project 17 27778587 27781626 + MGP_NODShiLtJ_P0046077 Zbtb9 protein_coding protein_coding MGP_NODShiLtJ_T0010094.1 MGP_NODShiLtJ_G0008227.1 mouse_genomes_project 17 28193684 28193760 + Mir7216 miRNA miRNA MGP_NODShiLtJ_T0100251.1 MGP_NODShiLtJ_G0038645.1 mouse_genomes_project 17 31174561 31174669 - Gm22327 snoRNA snoRNA MGP_NODShiLtJ_T0046038.1 MGP_NODShiLtJ_G0023221.1 mouse_genomes_project 17 27306183 27404246 + MGP_NODShiLtJ_P0046038 Ergic1 protein_coding protein_coding MGP_NODShiLtJ_T0046039.1 MGP_NODShiLtJ_G0023221.1 mouse_genomes_project 17 27306212 27314670 + Ergic1 protein_coding processed_transcript MGP_NODShiLtJ_T0046040.1 MGP_NODShiLtJ_G0023221.1 mouse_genomes_project 17 27306239 27402489 + Ergic1 protein_coding processed_transcript MGP_NODShiLtJ_T0046041.1 MGP_NODShiLtJ_G0023221.1 mouse_genomes_project 17 27360515 27380356 + MGP_NODShiLtJ_P0046041 Ergic1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046042.1 MGP_NODShiLtJ_G0023221.1 mouse_genomes_project 17 27367413 27402489 + Ergic1 protein_coding processed_transcript MGP_NODShiLtJ_T0046043.1 MGP_NODShiLtJ_G0023221.1 mouse_genomes_project 17 27370135 27389803 + Ergic1 protein_coding retained_intron MGP_NODShiLtJ_T0046044.1 MGP_NODShiLtJ_G0023221.1 mouse_genomes_project 17 27384667 27402667 + MGP_NODShiLtJ_P0046044 Ergic1 protein_coding protein_coding MGP_NODShiLtJ_T0045095.1 MGP_NODShiLtJ_G0022928.1 mouse_genomes_project 17 343411 569167 + MGP_NODShiLtJ_P0045095 Tiam2 protein_coding protein_coding MGP_NODShiLtJ_T0045096.1 MGP_NODShiLtJ_G0022928.1 mouse_genomes_project 17 422867 569167 + MGP_NODShiLtJ_P0045096 Tiam2 protein_coding protein_coding MGP_NODShiLtJ_T0045097.1 MGP_NODShiLtJ_G0022928.1 mouse_genomes_project 17 532353 568498 + MGP_NODShiLtJ_P0045097 Tiam2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0101765.1 MGP_NODShiLtJ_G0039933.1 mouse_genomes_project 17 39778681 39779608 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045938.1 MGP_NODShiLtJ_G0023198.1 mouse_genomes_project 17 26554544 26557220 - MGP_NODShiLtJ_P0045938 Wfikkn1 protein_coding protein_coding MGP_NODShiLtJ_T0045939.1 MGP_NODShiLtJ_G0023198.1 mouse_genomes_project 17 26555718 26557151 - MGP_NODShiLtJ_P0045939 Wfikkn1 protein_coding protein_coding MGP_NODShiLtJ_T0101752.1 MGP_NODShiLtJ_G0039920.1 mouse_genomes_project 17 38956796 38957920 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013126.1 MGP_NODShiLtJ_G0011234.1 mouse_genomes_project 17 38664117 38664485 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101766.1 MGP_NODShiLtJ_G0039934.1 mouse_genomes_project 17 39798747 39799468 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045392.1 MGP_NODShiLtJ_G0023029.1 mouse_genomes_project 17 20252035 20252932 + MGP_NODShiLtJ_P0045392 Vmn1r224 protein_coding protein_coding MGP_NODShiLtJ_T0046670.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35635664 35636427 - Rps18 protein_coding retained_intron MGP_NODShiLtJ_T0046671.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35635664 35639014 - Rps18 protein_coding processed_transcript MGP_NODShiLtJ_T0046672.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35635664 35639465 - MGP_NODShiLtJ_P0046672 Rps18 protein_coding protein_coding MGP_NODShiLtJ_T0046673.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35635664 35639519 - MGP_NODShiLtJ_P0046673 Rps18 protein_coding protein_coding MGP_NODShiLtJ_T0046674.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35635665 35639462 - Rps18 protein_coding retained_intron MGP_NODShiLtJ_T0046675.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35635665 35638283 - Rps18 protein_coding processed_transcript MGP_NODShiLtJ_T0046676.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35635669 35636283 - Rps18 protein_coding retained_intron MGP_NODShiLtJ_T0046677.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35636010 35639455 - Rps18 protein_coding retained_intron MGP_NODShiLtJ_T0046678.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35638626 35639462 - Rps18 protein_coding retained_intron MGP_NODShiLtJ_T0046679.1 MGP_NODShiLtJ_G0023370.1 mouse_genomes_project 17 35639320 35639803 - Rps18 protein_coding processed_transcript MGP_NODShiLtJ_T0046095.1 MGP_NODShiLtJ_G0023236.1 mouse_genomes_project 17 28293050 28378699 - MGP_NODShiLtJ_P0046095 Grm4 protein_coding protein_coding MGP_NODShiLtJ_T0046096.1 MGP_NODShiLtJ_G0023236.1 mouse_genomes_project 17 28296567 28388718 - MGP_NODShiLtJ_P0046096 Grm4 protein_coding protein_coding MGP_NODShiLtJ_T0046097.1 MGP_NODShiLtJ_G0023236.1 mouse_genomes_project 17 28321945 28345351 - Grm4 protein_coding retained_intron MGP_NODShiLtJ_T0046098.1 MGP_NODShiLtJ_G0023236.1 mouse_genomes_project 17 28323418 28345102 - Grm4 protein_coding processed_transcript MGP_NODShiLtJ_T0101707.1 MGP_NODShiLtJ_G0039876.1 mouse_genomes_project 17 21326224 21326960 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048144.1 MGP_NODShiLtJ_G0023816.1 mouse_genomes_project 17 76759980 76766792 + MGP_NODShiLtJ_P0048144 Tmem200c protein_coding protein_coding MGP_NODShiLtJ_T0048234.1 MGP_NODShiLtJ_G0023837.1 mouse_genomes_project 17 81182312 81197093 + MGP_NODShiLtJ_P0048234 Ypel5 protein_coding protein_coding MGP_NODShiLtJ_T0048052.1 MGP_NODShiLtJ_G0023784.1 mouse_genomes_project 17 63254734 63374094 + MGP_NODShiLtJ_P0048052 Adgre1 protein_coding protein_coding MGP_NODShiLtJ_T0048053.1 MGP_NODShiLtJ_G0023784.1 mouse_genomes_project 17 63254762 63374088 + MGP_NODShiLtJ_P0048053 Adgre1 protein_coding protein_coding MGP_NODShiLtJ_T0047324.1 MGP_NODShiLtJ_G0023515.1 mouse_genomes_project 17 39221990 39228986 + MGP_NODShiLtJ_P0047324 Znrd1as protein_coding protein_coding MGP_NODShiLtJ_T0047325.1 MGP_NODShiLtJ_G0023515.1 mouse_genomes_project 17 39222017 39228284 + Znrd1as protein_coding retained_intron MGP_NODShiLtJ_T0047326.1 MGP_NODShiLtJ_G0023515.1 mouse_genomes_project 17 39222039 39228986 + MGP_NODShiLtJ_P0047326 Znrd1as protein_coding protein_coding MGP_NODShiLtJ_T0046328.1 MGP_NODShiLtJ_G0023283.1 mouse_genomes_project 17 30669089 30669599 - MGP_NODShiLtJ_P0046328 Gm17657 protein_coding protein_coding MGP_NODShiLtJ_T0011319.1 MGP_NODShiLtJ_G0009452.1 mouse_genomes_project 17 51498654 51498948 - Gm23657 misc_RNA misc_RNA MGP_NODShiLtJ_T0047270.1 MGP_NODShiLtJ_G0023496.1 mouse_genomes_project 17 38446454 38448667 - MGP_NODShiLtJ_P0047270 Rpp21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047271.1 MGP_NODShiLtJ_G0023496.1 mouse_genomes_project 17 38446476 38448654 - Rpp21 protein_coding retained_intron MGP_NODShiLtJ_T0047272.1 MGP_NODShiLtJ_G0023496.1 mouse_genomes_project 17 38446476 38448879 - MGP_NODShiLtJ_P0047272 Rpp21 protein_coding protein_coding MGP_NODShiLtJ_T0047273.1 MGP_NODShiLtJ_G0023496.1 mouse_genomes_project 17 38446482 38447161 - Rpp21 protein_coding retained_intron MGP_NODShiLtJ_T0047274.1 MGP_NODShiLtJ_G0023496.1 mouse_genomes_project 17 38446521 38448421 - MGP_NODShiLtJ_P0047274 Rpp21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047275.1 MGP_NODShiLtJ_G0023496.1 mouse_genomes_project 17 38446753 38448666 - Rpp21 protein_coding retained_intron MGP_NODShiLtJ_T0101082.1 MGP_NODShiLtJ_G0039438.1 mouse_genomes_project 17 79014981 79016685 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0047951.1 MGP_NODShiLtJ_G0023745.1 mouse_genomes_project 17 62100267 62106580 + MGP_NODShiLtJ_P0047951 Uhrf1 protein_coding protein_coding MGP_NODShiLtJ_T0047952.1 MGP_NODShiLtJ_G0023745.1 mouse_genomes_project 17 62100958 62121295 + MGP_NODShiLtJ_P0047952 Uhrf1 protein_coding protein_coding MGP_NODShiLtJ_T0047953.1 MGP_NODShiLtJ_G0023745.1 mouse_genomes_project 17 62109799 62110313 + Uhrf1 protein_coding retained_intron MGP_NODShiLtJ_T0047954.1 MGP_NODShiLtJ_G0023745.1 mouse_genomes_project 17 62115187 62121132 + Uhrf1 protein_coding retained_intron MGP_NODShiLtJ_T0047786.1 MGP_NODShiLtJ_G0023683.1 mouse_genomes_project 17 52459547 52518998 - MGP_NODShiLtJ_P0047786 Foxp4 protein_coding protein_coding MGP_NODShiLtJ_T0047787.1 MGP_NODShiLtJ_G0023683.1 mouse_genomes_project 17 52460178 52518788 - MGP_NODShiLtJ_P0047787 Foxp4 protein_coding protein_coding MGP_NODShiLtJ_T0047788.1 MGP_NODShiLtJ_G0023683.1 mouse_genomes_project 17 52460178 52518753 - MGP_NODShiLtJ_P0047788 Foxp4 protein_coding protein_coding MGP_NODShiLtJ_T0047789.1 MGP_NODShiLtJ_G0023683.1 mouse_genomes_project 17 52460182 52518829 - MGP_NODShiLtJ_P0047789 Foxp4 protein_coding protein_coding MGP_NODShiLtJ_T0047790.1 MGP_NODShiLtJ_G0023683.1 mouse_genomes_project 17 52470598 52482085 - Foxp4 protein_coding processed_transcript MGP_NODShiLtJ_T0047791.1 MGP_NODShiLtJ_G0023683.1 mouse_genomes_project 17 52470793 52471267 - Foxp4 protein_coding retained_intron MGP_NODShiLtJ_T0047792.1 MGP_NODShiLtJ_G0023683.1 mouse_genomes_project 17 52472660 52481791 - Foxp4 protein_coding retained_intron MGP_NODShiLtJ_T0047793.1 MGP_NODShiLtJ_G0023683.1 mouse_genomes_project 17 52481537 52518779 - Foxp4 protein_coding retained_intron MGP_NODShiLtJ_T0013169.1 MGP_NODShiLtJ_G0011277.1 mouse_genomes_project 17 81560624 81562052 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048010.1 MGP_NODShiLtJ_G0023763.1 mouse_genomes_project 17 62725104 62739163 + MGP_NODShiLtJ_P0048010 1700061G19Rik protein_coding protein_coding MGP_NODShiLtJ_T0048011.1 MGP_NODShiLtJ_G0023763.1 mouse_genomes_project 17 62725130 62727446 + 1700061G19Rik protein_coding retained_intron MGP_NODShiLtJ_T0010119.1 MGP_NODShiLtJ_G0008252.1 mouse_genomes_project 17 61954196 61954309 - Gm44397 miRNA miRNA MGP_NODShiLtJ_T0101715.1 MGP_NODShiLtJ_G0039884.1 mouse_genomes_project 17 34461759 34468691 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048029.1 MGP_NODShiLtJ_G0023773.1 mouse_genomes_project 17 62929348 62937067 + MGP_NODShiLtJ_P0048029 Crb3 protein_coding protein_coding MGP_NODShiLtJ_T0048030.1 MGP_NODShiLtJ_G0023773.1 mouse_genomes_project 17 62932496 62937072 + MGP_NODShiLtJ_P0048030 Crb3 protein_coding protein_coding MGP_NODShiLtJ_T0048031.1 MGP_NODShiLtJ_G0023773.1 mouse_genomes_project 17 62932548 62937071 + MGP_NODShiLtJ_P0048031 Crb3 protein_coding protein_coding MGP_NODShiLtJ_T0048032.1 MGP_NODShiLtJ_G0023773.1 mouse_genomes_project 17 62932564 62936582 + MGP_NODShiLtJ_P0048032 Crb3 protein_coding protein_coding MGP_NODShiLtJ_T0048033.1 MGP_NODShiLtJ_G0023773.1 mouse_genomes_project 17 62932773 62936319 + MGP_NODShiLtJ_P0048033 Crb3 protein_coding protein_coding MGP_NODShiLtJ_T0003725.1 MGP_NODShiLtJ_G0003346.1 mouse_genomes_project 17 65054556 65070325 + Nudt12os antisense antisense MGP_NODShiLtJ_T0003726.1 MGP_NODShiLtJ_G0003346.1 mouse_genomes_project 17 65054580 65085057 + Nudt12os antisense antisense MGP_NODShiLtJ_T0003727.1 MGP_NODShiLtJ_G0003346.1 mouse_genomes_project 17 65075491 65084805 + Nudt12os antisense antisense MGP_NODShiLtJ_T0101716.1 MGP_NODShiLtJ_G0039885.1 mouse_genomes_project 17 35542962 35545889 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047430.1 MGP_NODShiLtJ_G0023581.1 mouse_genomes_project 17 44203336 44207361 + MGP_NODShiLtJ_P0047430 Esp4 protein_coding protein_coding MGP_NODShiLtJ_T0045424.1 MGP_NODShiLtJ_G0023052.1 mouse_genomes_project 17 21574583 21581604 + MGP_NODShiLtJ_P0045424 Zfp52 protein_coding protein_coding MGP_NODShiLtJ_T0003723.1 MGP_NODShiLtJ_G0003344.1 mouse_genomes_project 17 57728358 57739002 - Gm27217 antisense antisense MGP_NODShiLtJ_T0045868.1 MGP_NODShiLtJ_G0023183.1 mouse_genomes_project 17 26446000 26455422 + MGP_NODShiLtJ_P0045868 Narfl protein_coding protein_coding MGP_NODShiLtJ_T0045869.1 MGP_NODShiLtJ_G0023183.1 mouse_genomes_project 17 26446000 26454881 + MGP_NODShiLtJ_P0045869 Narfl protein_coding protein_coding MGP_NODShiLtJ_T0045870.1 MGP_NODShiLtJ_G0023183.1 mouse_genomes_project 17 26446031 26447450 + Narfl protein_coding retained_intron MGP_NODShiLtJ_T0045871.1 MGP_NODShiLtJ_G0023183.1 mouse_genomes_project 17 26446041 26451603 + MGP_NODShiLtJ_P0045871 Narfl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045872.1 MGP_NODShiLtJ_G0023183.1 mouse_genomes_project 17 26446043 26454886 + Narfl protein_coding retained_intron MGP_NODShiLtJ_T0045873.1 MGP_NODShiLtJ_G0023183.1 mouse_genomes_project 17 26448908 26451683 + Narfl protein_coding retained_intron MGP_NODShiLtJ_T0048317.1 MGP_NODShiLtJ_G0023868.1 mouse_genomes_project 17 88426559 88500596 - MGP_NODShiLtJ_P0048317 Prkd3 protein_coding protein_coding MGP_NODShiLtJ_T0048318.1 MGP_NODShiLtJ_G0023868.1 mouse_genomes_project 17 88426559 88492969 - MGP_NODShiLtJ_P0048318 Prkd3 protein_coding protein_coding MGP_NODShiLtJ_T0048319.1 MGP_NODShiLtJ_G0023868.1 mouse_genomes_project 17 88427699 88500596 - MGP_NODShiLtJ_P0048319 Prkd3 protein_coding protein_coding MGP_NODShiLtJ_T0048320.1 MGP_NODShiLtJ_G0023868.1 mouse_genomes_project 17 88428793 88487034 - MGP_NODShiLtJ_P0048320 Prkd3 protein_coding protein_coding MGP_NODShiLtJ_T0048321.1 MGP_NODShiLtJ_G0023868.1 mouse_genomes_project 17 88446841 88462565 - Prkd3 protein_coding retained_intron MGP_NODShiLtJ_T0048322.1 MGP_NODShiLtJ_G0023868.1 mouse_genomes_project 17 88449024 88500547 - MGP_NODShiLtJ_P0048322 Prkd3 protein_coding protein_coding MGP_NODShiLtJ_T0048323.1 MGP_NODShiLtJ_G0023868.1 mouse_genomes_project 17 88449493 88487217 - Prkd3 protein_coding processed_transcript MGP_NODShiLtJ_T0048324.1 MGP_NODShiLtJ_G0023868.1 mouse_genomes_project 17 88489777 88500557 - Prkd3 protein_coding retained_intron MGP_NODShiLtJ_T0006934.1 MGP_NODShiLtJ_G0005695.1 mouse_genomes_project 17 98600365 98621444 - Gm26612 lincRNA lincRNA MGP_NODShiLtJ_T0045481.1 MGP_NODShiLtJ_G0023080.1 mouse_genomes_project 17 24138540 24139571 - Thoc6 protein_coding retained_intron MGP_NODShiLtJ_T0045482.1 MGP_NODShiLtJ_G0023080.1 mouse_genomes_project 17 24138544 24143597 - Thoc6 protein_coding retained_intron MGP_NODShiLtJ_T0045483.1 MGP_NODShiLtJ_G0023080.1 mouse_genomes_project 17 24138544 24143637 - MGP_NODShiLtJ_P0045483 Thoc6 protein_coding protein_coding MGP_NODShiLtJ_T0045484.1 MGP_NODShiLtJ_G0023080.1 mouse_genomes_project 17 24138544 24143597 - MGP_NODShiLtJ_P0045484 Thoc6 protein_coding protein_coding MGP_NODShiLtJ_T0045485.1 MGP_NODShiLtJ_G0023080.1 mouse_genomes_project 17 24138723 24143360 - MGP_NODShiLtJ_P0045485 Thoc6 protein_coding protein_coding MGP_NODShiLtJ_T0045486.1 MGP_NODShiLtJ_G0023080.1 mouse_genomes_project 17 24138723 24143584 - MGP_NODShiLtJ_P0045486 Thoc6 protein_coding protein_coding MGP_NODShiLtJ_T0045487.1 MGP_NODShiLtJ_G0023080.1 mouse_genomes_project 17 24139127 24140436 - MGP_NODShiLtJ_P0045487 Thoc6 protein_coding protein_coding MGP_NODShiLtJ_T0045488.1 MGP_NODShiLtJ_G0023080.1 mouse_genomes_project 17 24140248 24143626 - MGP_NODShiLtJ_P0045488 Thoc6 protein_coding protein_coding MGP_NODShiLtJ_T0047503.1 MGP_NODShiLtJ_G0023611.1 mouse_genomes_project 17 49746724 49778198 - MGP_NODShiLtJ_P0047503 Spats1 protein_coding protein_coding MGP_NODShiLtJ_T0101755.1 MGP_NODShiLtJ_G0039923.1 mouse_genomes_project 17 38977704 39071256 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006921.1 MGP_NODShiLtJ_G0005685.1 mouse_genomes_project 17 83166567 83218334 - Gm26749 lincRNA lincRNA MGP_NODShiLtJ_T0047445.1 MGP_NODShiLtJ_G0023591.1 mouse_genomes_project 17 46590382 46654218 - MGP_NODShiLtJ_P0047445 Opn5 protein_coding protein_coding MGP_NODShiLtJ_T0013141.1 MGP_NODShiLtJ_G0011249.1 mouse_genomes_project 17 41262347 41263019 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013163.1 MGP_NODShiLtJ_G0011271.1 mouse_genomes_project 17 70757186 70757677 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047108.1 MGP_NODShiLtJ_G0023465.1 mouse_genomes_project 17 37561950 37563453 + MGP_NODShiLtJ_P0047108 2300002M23Rik protein_coding protein_coding MGP_NODShiLtJ_T0047109.1 MGP_NODShiLtJ_G0023465.1 mouse_genomes_project 17 37561985 37563431 + 2300002M23Rik protein_coding retained_intron MGP_NODShiLtJ_T0048357.1 MGP_NODShiLtJ_G0023888.1 mouse_genomes_project 17 90594179 90658298 + MGP_NODShiLtJ_P0048357 Tmem178 protein_coding protein_coding MGP_NODShiLtJ_T0010080.1 MGP_NODShiLtJ_G0008213.1 mouse_genomes_project 17 24541854 24541935 + Gm27700 miRNA miRNA MGP_NODShiLtJ_T0045541.1 MGP_NODShiLtJ_G0023102.1 mouse_genomes_project 17 24496489 24499592 - MGP_NODShiLtJ_P0045541 Prss30 protein_coding protein_coding MGP_NODShiLtJ_T0045542.1 MGP_NODShiLtJ_G0023102.1 mouse_genomes_project 17 24497202 24499163 - MGP_NODShiLtJ_P0045542 Prss30 protein_coding protein_coding MGP_NODShiLtJ_T0045543.1 MGP_NODShiLtJ_G0023102.1 mouse_genomes_project 17 24497429 24499536 - Prss30 protein_coding retained_intron MGP_NODShiLtJ_T0045544.1 MGP_NODShiLtJ_G0023102.1 mouse_genomes_project 17 24497453 24499042 - MGP_NODShiLtJ_P0045544 Prss30 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045545.1 MGP_NODShiLtJ_G0023102.1 mouse_genomes_project 17 24498029 24499560 - MGP_NODShiLtJ_P0045545 Prss30 protein_coding protein_coding MGP_NODShiLtJ_T0045546.1 MGP_NODShiLtJ_G0023103.1 mouse_genomes_project 17 24525351 24529929 - MGP_NODShiLtJ_P0045546 Prss22 protein_coding protein_coding MGP_NODShiLtJ_T0098988.1 MGP_NODShiLtJ_G0037382.1 mouse_genomes_project 17 24917464 24917571 - Gm25618 snRNA snRNA MGP_NODShiLtJ_T0047429.1 MGP_NODShiLtJ_G0023580.1 mouse_genomes_project 17 44159657 44185566 + MGP_NODShiLtJ_P0047429 Gm44501 protein_coding protein_coding MGP_NODShiLtJ_T0101747.1 MGP_NODShiLtJ_G0039915.1 mouse_genomes_project 17 38774951 38775177 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046740.1 MGP_NODShiLtJ_G0023381.1 mouse_genomes_project 17 35862074 35866665 + H2-DMb2 protein_coding processed_transcript MGP_NODShiLtJ_T0046742.1 MGP_NODShiLtJ_G0023381.1 mouse_genomes_project 17 35863998 35870808 + MGP_NODShiLtJ_P0046742 H2-DMb2 protein_coding protein_coding MGP_NODShiLtJ_T0046743.1 MGP_NODShiLtJ_G0023381.1 mouse_genomes_project 17 35864040 35870812 + MGP_NODShiLtJ_P0046743 H2-DMb2 protein_coding protein_coding MGP_NODShiLtJ_T0047794.1 MGP_NODShiLtJ_G0023684.1 mouse_genomes_project 17 52651669 52653219 - MGP_NODShiLtJ_P0047794 1700122O11Rik protein_coding protein_coding MGP_NODShiLtJ_T0013099.1 MGP_NODShiLtJ_G0011207.1 mouse_genomes_project 17 22141015 22141694 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045904.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26512879 26519272 - MGP_NODShiLtJ_P0045904 Rhot2 protein_coding protein_coding MGP_NODShiLtJ_T0045905.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26513260 26515571 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045906.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26513262 26518884 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045907.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26513696 26515022 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045908.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26514476 26516085 - Rhot2 protein_coding processed_transcript MGP_NODShiLtJ_T0045909.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26515678 26516477 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045910.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26515759 26517560 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045911.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26515808 26516529 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045912.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26515982 26518727 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045913.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26515990 26517566 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045914.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26516027 26518739 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045915.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26516182 26518838 - MGP_NODShiLtJ_P0045915 Rhot2 protein_coding protein_coding MGP_NODShiLtJ_T0045916.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26516518 26518867 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0045917.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26516674 26518946 - MGP_NODShiLtJ_P0045917 Rhot2 protein_coding protein_coding MGP_NODShiLtJ_T0045918.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26516678 26518990 - Rhot2 protein_coding processed_transcript MGP_NODShiLtJ_T0045919.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26516804 26518963 - Rhot2 protein_coding processed_transcript MGP_NODShiLtJ_T0045920.1 MGP_NODShiLtJ_G0023194.1 mouse_genomes_project 17 26518195 26518951 - Rhot2 protein_coding retained_intron MGP_NODShiLtJ_T0048489.1 MGP_NODShiLtJ_G0023935.1 mouse_genomes_project 17 99253992 99304526 - MGP_NODShiLtJ_P0048489 Lhcgr protein_coding protein_coding MGP_NODShiLtJ_T0099012.1 MGP_NODShiLtJ_G0037406.1 mouse_genomes_project 17 84841908 84842014 + Gm24126 snRNA snRNA MGP_NODShiLtJ_T0045293.1 MGP_NODShiLtJ_G0022989.1 mouse_genomes_project 17 12668926 12801792 + MGP_NODShiLtJ_P0045293 Smoc2 protein_coding protein_coding MGP_NODShiLtJ_T0048392.1 MGP_NODShiLtJ_G0023903.1 mouse_genomes_project 17 94809394 94829557 + MGP_NODShiLtJ_P0048392 Abcg8 protein_coding protein_coding MGP_NODShiLtJ_T0048393.1 MGP_NODShiLtJ_G0023903.1 mouse_genomes_project 17 94809505 94829565 + MGP_NODShiLtJ_P0048393 Abcg8 protein_coding protein_coding MGP_NODShiLtJ_T0011330.1 MGP_NODShiLtJ_G0009463.1 mouse_genomes_project 17 95811992 95812264 + Gm27275 misc_RNA misc_RNA MGP_NODShiLtJ_T0013149.1 MGP_NODShiLtJ_G0011257.1 mouse_genomes_project 17 58743587 58744354 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046550.1 MGP_NODShiLtJ_G0023348.1 mouse_genomes_project 17 35030921 35032294 + MGP_NODShiLtJ_P0046550 Actl9 protein_coding protein_coding MGP_NODShiLtJ_T0045437.1 MGP_NODShiLtJ_G0023061.1 mouse_genomes_project 17 21984856 22020871 - MGP_NODShiLtJ_P0045437 protein_coding protein_coding MGP_NODShiLtJ_T0045438.1 MGP_NODShiLtJ_G0023061.1 mouse_genomes_project 17 21996046 22020584 - protein_coding processed_transcript MGP_NODShiLtJ_T0045439.1 MGP_NODShiLtJ_G0023061.1 mouse_genomes_project 17 21997300 22019110 - protein_coding processed_transcript MGP_NODShiLtJ_T0045440.1 MGP_NODShiLtJ_G0023061.1 mouse_genomes_project 17 22018980 22020870 - protein_coding retained_intron MGP_NODShiLtJ_T0000972.1 MGP_NODShiLtJ_G0000898.1 mouse_genomes_project 17 56954486 56958591 + TEC TEC MGP_NODShiLtJ_T0045197.1 MGP_NODShiLtJ_G0022962.1 mouse_genomes_project 17 6287099 6288198 - Gm17087 protein_coding translated_processed_pseudogene MGP_NODShiLtJ_T0045198.1 MGP_NODShiLtJ_G0022962.1 mouse_genomes_project 17 6287646 6288117 - MGP_NODShiLtJ_P0045198 Gm17087 protein_coding protein_coding MGP_NODShiLtJ_T0003646.1 MGP_NODShiLtJ_G0003293.1 mouse_genomes_project 17 2632552 2661317 + Gm29050 antisense antisense MGP_NODShiLtJ_T0003647.1 MGP_NODShiLtJ_G0003293.1 mouse_genomes_project 17 2647920 2663573 + Gm29050 antisense antisense MGP_NODShiLtJ_T0048084.1 MGP_NODShiLtJ_G0023799.1 mouse_genomes_project 17 73252481 73257096 - MGP_NODShiLtJ_P0048084 Txndc2 protein_coding protein_coding MGP_NODShiLtJ_T0045805.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25901192 25914190 - MGP_NODShiLtJ_P0045805 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045806.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25901197 25913253 - MGP_NODShiLtJ_P0045806 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045807.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25901451 25914190 - MGP_NODShiLtJ_P0045807 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045808.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25901455 25913784 - MGP_NODShiLtJ_P0045808 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045809.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25901455 25905722 - MGP_NODShiLtJ_P0045809 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045810.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25901582 25913404 - MGP_NODShiLtJ_P0045810 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045811.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25902242 25914515 - MGP_NODShiLtJ_P0045811 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045812.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25904322 25905189 - Ube2i protein_coding retained_intron MGP_NODShiLtJ_T0045813.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25904992 25913460 - MGP_NODShiLtJ_P0045813 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045814.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25906416 25913737 - MGP_NODShiLtJ_P0045814 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045815.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25908258 25914182 - MGP_NODShiLtJ_P0045815 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045816.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25909103 25913470 - MGP_NODShiLtJ_P0045816 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045817.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25909252 25913025 - MGP_NODShiLtJ_P0045817 Ube2i protein_coding protein_coding MGP_NODShiLtJ_T0045818.1 MGP_NODShiLtJ_G0023166.1 mouse_genomes_project 17 25912532 25913129 - Ube2i protein_coding processed_transcript MGP_NODShiLtJ_T0047139.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37681838 37700830 - MGP_NODShiLtJ_P0047139 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047140.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37681838 37706245 - MGP_NODShiLtJ_P0047140 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047141.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37681841 37705687 - MGP_NODShiLtJ_P0047141 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047142.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37681841 37705785 - MGP_NODShiLtJ_P0047142 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047143.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37681841 37702263 - MGP_NODShiLtJ_P0047143 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047144.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37682702 37700772 - MGP_NODShiLtJ_P0047144 Ddr1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047145.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37685565 37702183 - MGP_NODShiLtJ_P0047145 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047146.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37690283 37705623 - MGP_NODShiLtJ_P0047146 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047147.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37690311 37706267 - MGP_NODShiLtJ_P0047147 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047148.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37690411 37698215 - MGP_NODShiLtJ_P0047148 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047149.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37691387 37702265 - MGP_NODShiLtJ_P0047149 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047150.1 MGP_NODShiLtJ_G0023471.1 mouse_genomes_project 17 37693254 37702536 - MGP_NODShiLtJ_P0047150 Ddr1 protein_coding protein_coding MGP_NODShiLtJ_T0047402.1 MGP_NODShiLtJ_G0023557.1 mouse_genomes_project 17 40392723 40394303 + MGP_NODShiLtJ_P0047402 protein_coding protein_coding MGP_NODShiLtJ_T0046680.1 MGP_NODShiLtJ_G0023371.1 mouse_genomes_project 17 35639613 35651012 + MGP_NODShiLtJ_P0046680 Vps52 protein_coding protein_coding MGP_NODShiLtJ_T0046681.1 MGP_NODShiLtJ_G0023371.1 mouse_genomes_project 17 35639716 35649986 + MGP_NODShiLtJ_P0046681 Vps52 protein_coding protein_coding MGP_NODShiLtJ_T0046682.1 MGP_NODShiLtJ_G0023371.1 mouse_genomes_project 17 35641832 35644275 + Vps52 protein_coding retained_intron MGP_NODShiLtJ_T0046683.1 MGP_NODShiLtJ_G0023371.1 mouse_genomes_project 17 35642792 35644304 + Vps52 protein_coding retained_intron MGP_NODShiLtJ_T0046684.1 MGP_NODShiLtJ_G0023371.1 mouse_genomes_project 17 35644905 35647422 + Vps52 protein_coding retained_intron MGP_NODShiLtJ_T0046685.1 MGP_NODShiLtJ_G0023371.1 mouse_genomes_project 17 35646989 35650283 + Vps52 protein_coding retained_intron MGP_NODShiLtJ_T0046128.1 MGP_NODShiLtJ_G0023242.1 mouse_genomes_project 17 28552531 28617747 + MGP_NODShiLtJ_P0046128 Pacsin1 protein_coding protein_coding MGP_NODShiLtJ_T0046129.1 MGP_NODShiLtJ_G0023242.1 mouse_genomes_project 17 28552610 28620197 + MGP_NODShiLtJ_P0046129 Pacsin1 protein_coding protein_coding MGP_NODShiLtJ_T0046130.1 MGP_NODShiLtJ_G0023242.1 mouse_genomes_project 17 28552665 28617768 + MGP_NODShiLtJ_P0046130 Pacsin1 protein_coding protein_coding MGP_NODShiLtJ_T0046131.1 MGP_NODShiLtJ_G0023242.1 mouse_genomes_project 17 28587070 28617747 + MGP_NODShiLtJ_P0046131 Pacsin1 protein_coding protein_coding MGP_NODShiLtJ_T0046132.1 MGP_NODShiLtJ_G0023242.1 mouse_genomes_project 17 28587100 28590860 + Pacsin1 protein_coding processed_transcript MGP_NODShiLtJ_T0003696.1 MGP_NODShiLtJ_G0003322.1 mouse_genomes_project 17 36414482 36414908 + Gm20463 antisense antisense MGP_NODShiLtJ_T0047032.1 MGP_NODShiLtJ_G0023444.1 mouse_genomes_project 17 37052742 37055796 - MGP_NODShiLtJ_P0047032 Apom protein_coding protein_coding MGP_NODShiLtJ_T0045933.1 MGP_NODShiLtJ_G0023197.1 mouse_genomes_project 17 26552410 26554107 + MGP_NODShiLtJ_P0045933 Mettl26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045934.1 MGP_NODShiLtJ_G0023197.1 mouse_genomes_project 17 26552446 26554116 + MGP_NODShiLtJ_P0045934 Mettl26 protein_coding protein_coding MGP_NODShiLtJ_T0045935.1 MGP_NODShiLtJ_G0023197.1 mouse_genomes_project 17 26552447 26554116 + MGP_NODShiLtJ_P0045935 Mettl26 protein_coding protein_coding MGP_NODShiLtJ_T0045936.1 MGP_NODShiLtJ_G0023197.1 mouse_genomes_project 17 26552476 26562922 + MGP_NODShiLtJ_P0045936 Mettl26 protein_coding protein_coding MGP_NODShiLtJ_T0045937.1 MGP_NODShiLtJ_G0023197.1 mouse_genomes_project 17 26552476 26553944 + MGP_NODShiLtJ_P0045937 Mettl26 protein_coding protein_coding MGP_NODShiLtJ_T0048349.1 MGP_NODShiLtJ_G0023882.1 mouse_genomes_project 17 89895317 89980477 + MGP_NODShiLtJ_P0048349 Arhgef33 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048350.1 MGP_NODShiLtJ_G0023882.1 mouse_genomes_project 17 89895449 89984882 + MGP_NODShiLtJ_P0048350 Arhgef33 protein_coding protein_coding MGP_NODShiLtJ_T0047088.1 MGP_NODShiLtJ_G0023459.1 mouse_genomes_project 17 37442707 37450010 + MGP_NODShiLtJ_P0047088 H2-Q10 protein_coding protein_coding MGP_NODShiLtJ_T0045465.1 MGP_NODShiLtJ_G0023076.1 mouse_genomes_project 17 24022918 24037704 - MGP_NODShiLtJ_P0045465 Zfp13 protein_coding protein_coding MGP_NODShiLtJ_T0045466.1 MGP_NODShiLtJ_G0023076.1 mouse_genomes_project 17 24022925 24058869 - MGP_NODShiLtJ_P0045466 Zfp13 protein_coding protein_coding MGP_NODShiLtJ_T0101712.1 MGP_NODShiLtJ_G0039881.1 mouse_genomes_project 17 23513736 23514387 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048237.1 MGP_NODShiLtJ_G0023839.1 mouse_genomes_project 17 81477353 81536636 + MGP_NODShiLtJ_P0048237 Lclat1 protein_coding protein_coding MGP_NODShiLtJ_T0048238.1 MGP_NODShiLtJ_G0023839.1 mouse_genomes_project 17 81477356 81567145 + MGP_NODShiLtJ_P0048238 Lclat1 protein_coding protein_coding MGP_NODShiLtJ_T0048239.1 MGP_NODShiLtJ_G0023839.1 mouse_genomes_project 17 81477362 81612516 + MGP_NODShiLtJ_P0048239 Lclat1 protein_coding protein_coding MGP_NODShiLtJ_T0048240.1 MGP_NODShiLtJ_G0023839.1 mouse_genomes_project 17 81537682 81609056 + Lclat1 protein_coding processed_transcript MGP_NODShiLtJ_T0048241.1 MGP_NODShiLtJ_G0023839.1 mouse_genomes_project 17 81574514 81609519 + Lclat1 protein_coding processed_transcript MGP_NODShiLtJ_T0006858.1 MGP_NODShiLtJ_G0005641.1 mouse_genomes_project 17 28647102 28653428 + Gm15458 lincRNA lincRNA MGP_NODShiLtJ_T0101764.1 MGP_NODShiLtJ_G0039932.1 mouse_genomes_project 17 39772287 39773126 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045458.1 MGP_NODShiLtJ_G0023072.1 mouse_genomes_project 17 23520137 23542674 - MGP_NODShiLtJ_P0045458 Zfp40 protein_coding protein_coding MGP_NODShiLtJ_T0045459.1 MGP_NODShiLtJ_G0023072.1 mouse_genomes_project 17 23520165 23542681 - Zfp40 protein_coding processed_transcript MGP_NODShiLtJ_T0045460.1 MGP_NODShiLtJ_G0023072.1 mouse_genomes_project 17 23523557 23542722 - Zfp40 protein_coding processed_transcript MGP_NODShiLtJ_T0045461.1 MGP_NODShiLtJ_G0023072.1 mouse_genomes_project 17 23540816 23542723 - MGP_NODShiLtJ_P0045461 Zfp40 protein_coding protein_coding MGP_NODShiLtJ_T0047443.1 MGP_NODShiLtJ_G0023589.1 mouse_genomes_project 17 44599568 44630830 + MGP_NODShiLtJ_P0047443 Mut protein_coding protein_coding MGP_NODShiLtJ_T0047682.1 MGP_NODShiLtJ_G0023654.1 mouse_genomes_project 17 51195258 51196397 - Gnmt protein_coding retained_intron MGP_NODShiLtJ_T0047683.1 MGP_NODShiLtJ_G0023654.1 mouse_genomes_project 17 51195258 51199584 - MGP_NODShiLtJ_P0047683 Gnmt protein_coding protein_coding MGP_NODShiLtJ_T0017425.1 MGP_NODShiLtJ_G0015219.1 mouse_genomes_project 17 36520116 36520778 - processed_transcript retained_intron MGP_NODShiLtJ_T0017426.1 MGP_NODShiLtJ_G0015219.1 mouse_genomes_project 17 36520505 36521624 - processed_transcript retained_intron MGP_NODShiLtJ_T0101769.1 MGP_NODShiLtJ_G0039937.1 mouse_genomes_project 17 40569120 40571359 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046515.1 MGP_NODShiLtJ_G0023332.1 mouse_genomes_project 17 34386241 34398468 - MGP_NODShiLtJ_P0046515 Zfp870 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046516.1 MGP_NODShiLtJ_G0023332.1 mouse_genomes_project 17 34386251 34393466 - MGP_NODShiLtJ_P0046516 Zfp870 protein_coding protein_coding MGP_NODShiLtJ_T0047898.1 MGP_NODShiLtJ_G0023715.1 mouse_genomes_project 17 59119181 59136990 - MGP_NODShiLtJ_P0047898 Sult1c2 protein_coding protein_coding MGP_NODShiLtJ_T0046666.1 MGP_NODShiLtJ_G0023368.1 mouse_genomes_project 17 35624618 35633379 + MGP_NODShiLtJ_P0046666 Wdr46 protein_coding protein_coding MGP_NODShiLtJ_T0046667.1 MGP_NODShiLtJ_G0023368.1 mouse_genomes_project 17 35624675 35625419 + Wdr46 protein_coding retained_intron MGP_NODShiLtJ_T0046668.1 MGP_NODShiLtJ_G0023368.1 mouse_genomes_project 17 35625363 35627648 + Wdr46 protein_coding retained_intron MGP_NODShiLtJ_T0048464.1 MGP_NODShiLtJ_G0023928.1 mouse_genomes_project 17 98357881 98358298 + MGP_NODShiLtJ_P0048464 Rpl36-ps4 protein_coding protein_coding MGP_NODShiLtJ_T0097778.1 MGP_NODShiLtJ_G0036190.1 mouse_genomes_project 17 35030921 35032291 + pseudogene pseudogene MGP_NODShiLtJ_T0045419.1 MGP_NODShiLtJ_G0023049.1 mouse_genomes_project 17 21431926 21445285 + MGP_NODShiLtJ_P0045419 Zfp54 protein_coding protein_coding MGP_NODShiLtJ_T0045420.1 MGP_NODShiLtJ_G0023049.1 mouse_genomes_project 17 21431932 21444799 + MGP_NODShiLtJ_P0045420 Zfp54 protein_coding protein_coding MGP_NODShiLtJ_T0045421.1 MGP_NODShiLtJ_G0023049.1 mouse_genomes_project 17 21431957 21443590 + MGP_NODShiLtJ_P0045421 Zfp54 protein_coding protein_coding MGP_NODShiLtJ_T0013143.1 MGP_NODShiLtJ_G0011251.1 mouse_genomes_project 17 51552634 51553114 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047421.1 MGP_NODShiLtJ_G0023572.1 mouse_genomes_project 17 42121186 42121894 - MGP_NODShiLtJ_P0047421 Gm21903 protein_coding protein_coding MGP_NODShiLtJ_T0045396.1 MGP_NODShiLtJ_G0023033.1 mouse_genomes_project 17 20444548 20462148 - MGP_NODShiLtJ_P0045396 Vmn2r109 protein_coding protein_coding MGP_NODShiLtJ_T0047242.1 MGP_NODShiLtJ_G0023485.1 mouse_genomes_project 17 38029357 38037989 + MGP_NODShiLtJ_P0047242 Gnl1 protein_coding protein_coding MGP_NODShiLtJ_T0047243.1 MGP_NODShiLtJ_G0023485.1 mouse_genomes_project 17 38029366 38030116 + Gnl1 protein_coding retained_intron MGP_NODShiLtJ_T0045195.1 MGP_NODShiLtJ_G0022961.1 mouse_genomes_project 17 6239273 6669391 + MGP_NODShiLtJ_P0045195 Pde10a protein_coding protein_coding MGP_NODShiLtJ_T0045196.1 MGP_NODShiLtJ_G0022961.1 mouse_genomes_project 17 6240653 6730971 + MGP_NODShiLtJ_P0045196 Pde10a protein_coding protein_coding MGP_NODShiLtJ_T0045199.1 MGP_NODShiLtJ_G0022961.1 mouse_genomes_project 17 6535392 6639028 + Pde10a protein_coding retained_intron MGP_NODShiLtJ_T0045200.1 MGP_NODShiLtJ_G0022961.1 mouse_genomes_project 17 6535579 6735120 + MGP_NODShiLtJ_P0045200 Pde10a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045201.1 MGP_NODShiLtJ_G0022961.1 mouse_genomes_project 17 6535879 6735128 + MGP_NODShiLtJ_P0045201 Pde10a protein_coding protein_coding MGP_NODShiLtJ_T0045202.1 MGP_NODShiLtJ_G0022961.1 mouse_genomes_project 17 6585016 6730875 + MGP_NODShiLtJ_P0045202 Pde10a protein_coding protein_coding MGP_NODShiLtJ_T0045203.1 MGP_NODShiLtJ_G0022961.1 mouse_genomes_project 17 6633129 6676495 + Pde10a protein_coding processed_transcript MGP_NODShiLtJ_T0045204.1 MGP_NODShiLtJ_G0022961.1 mouse_genomes_project 17 6670107 6732763 + MGP_NODShiLtJ_P0045204 Pde10a protein_coding protein_coding MGP_NODShiLtJ_T0045524.1 MGP_NODShiLtJ_G0023094.1 mouse_genomes_project 17 24314475 24324317 - MGP_NODShiLtJ_P0045524 Prss41 protein_coding protein_coding MGP_NODShiLtJ_T0045525.1 MGP_NODShiLtJ_G0023094.1 mouse_genomes_project 17 24314475 24324300 - MGP_NODShiLtJ_P0045525 Prss41 protein_coding protein_coding MGP_NODShiLtJ_T0045526.1 MGP_NODShiLtJ_G0023094.1 mouse_genomes_project 17 24319342 24324317 - MGP_NODShiLtJ_P0045526 Prss41 protein_coding protein_coding MGP_NODShiLtJ_T0045527.1 MGP_NODShiLtJ_G0023094.1 mouse_genomes_project 17 24320471 24324294 - Prss41 protein_coding retained_intron MGP_NODShiLtJ_T0013106.1 MGP_NODShiLtJ_G0011214.1 mouse_genomes_project 17 26997200 26999124 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045308.1 MGP_NODShiLtJ_G0022995.1 mouse_genomes_project 17 13440404 13457926 - MGP_NODShiLtJ_P0045308 protein_coding protein_coding MGP_NODShiLtJ_T0045309.1 MGP_NODShiLtJ_G0022995.1 mouse_genomes_project 17 13440404 13457926 - MGP_NODShiLtJ_P0045309 protein_coding protein_coding MGP_NODShiLtJ_T0047374.1 MGP_NODShiLtJ_G0023533.1 mouse_genomes_project 17 39647847 39649999 - MGP_NODShiLtJ_P0047374 protein_coding protein_coding MGP_NODShiLtJ_T0000977.1 MGP_NODShiLtJ_G0000903.1 mouse_genomes_project 17 94095527 94099592 - TEC TEC MGP_NODShiLtJ_T0045547.1 MGP_NODShiLtJ_G0023104.1 mouse_genomes_project 17 24556437 24559810 + MGP_NODShiLtJ_P0045547 Gm5225 protein_coding protein_coding MGP_NODShiLtJ_T0047086.1 MGP_NODShiLtJ_G0023457.1 mouse_genomes_project 17 37268913 37271823 + MGP_NODShiLtJ_P0047086 H2-Q1 protein_coding protein_coding MGP_NODShiLtJ_T0045932.1 MGP_NODShiLtJ_G0023196.1 mouse_genomes_project 17 26538086 26543087 - MGP_NODShiLtJ_P0045932 Fam195a protein_coding protein_coding MGP_NODShiLtJ_T0047908.1 MGP_NODShiLtJ_G0023722.1 mouse_genomes_project 17 61610402 61627883 - MGP_NODShiLtJ_P0047908 Zfp119a protein_coding protein_coding MGP_NODShiLtJ_T0047996.1 MGP_NODShiLtJ_G0023752.1 mouse_genomes_project 17 62440012 62440861 + MGP_NODShiLtJ_P0047996 Rpl36 protein_coding protein_coding MGP_NODShiLtJ_T0047087.1 MGP_NODShiLtJ_G0023458.1 mouse_genomes_project 17 37294426 37297979 + MGP_NODShiLtJ_P0047087 H2-Q2 protein_coding protein_coding MGP_NODShiLtJ_T0046531.1 MGP_NODShiLtJ_G0023337.1 mouse_genomes_project 17 34530232 34549427 - MGP_NODShiLtJ_P0046531 Zfp763 protein_coding protein_coding MGP_NODShiLtJ_T0046532.1 MGP_NODShiLtJ_G0023337.1 mouse_genomes_project 17 34533173 34549193 - Zfp763 protein_coding processed_transcript MGP_NODShiLtJ_T0098289.1 MGP_NODShiLtJ_G0036696.1 mouse_genomes_project 17 70711734 70720020 - 4930405O22Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0098290.1 MGP_NODShiLtJ_G0036696.1 mouse_genomes_project 17 70711967 70720022 - 4930405O22Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0047795.1 MGP_NODShiLtJ_G0023685.1 mouse_genomes_project 17 52699822 52701103 + MGP_NODShiLtJ_P0047795 1700067P10Rik protein_coding protein_coding MGP_NODShiLtJ_T0046987.1 MGP_NODShiLtJ_G0023431.1 mouse_genomes_project 17 36968199 36978235 + MGP_NODShiLtJ_P0046987 Clic1 protein_coding protein_coding MGP_NODShiLtJ_T0046988.1 MGP_NODShiLtJ_G0023431.1 mouse_genomes_project 17 36970558 36973825 + Clic1 protein_coding retained_intron MGP_NODShiLtJ_T0047689.1 MGP_NODShiLtJ_G0023656.1 mouse_genomes_project 17 51229106 51237178 - MGP_NODShiLtJ_P0047689 Ptcra protein_coding protein_coding MGP_NODShiLtJ_T0046942.1 MGP_NODShiLtJ_G0023423.1 mouse_genomes_project 17 36862321 36866079 - MGP_NODShiLtJ_P0046942 Hspa1a protein_coding protein_coding MGP_NODShiLtJ_T0045750.1 MGP_NODShiLtJ_G0023153.1 mouse_genomes_project 17 25587334 25642950 - MGP_NODShiLtJ_P0045750 Cramp1l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046539.1 MGP_NODShiLtJ_G0023341.1 mouse_genomes_project 17 34704068 34705206 + MGP_NODShiLtJ_P0046539 protein_coding protein_coding MGP_NODShiLtJ_T0013091.1 MGP_NODShiLtJ_G0011199.1 mouse_genomes_project 17 10888076 10889100 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047501.1 MGP_NODShiLtJ_G0023610.1 mouse_genomes_project 17 49685428 49730862 - MGP_NODShiLtJ_P0047501 Cdc5l protein_coding protein_coding MGP_NODShiLtJ_T0047502.1 MGP_NODShiLtJ_G0023610.1 mouse_genomes_project 17 49685736 49730590 - MGP_NODShiLtJ_P0047502 Cdc5l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046574.1 MGP_NODShiLtJ_G0023352.1 mouse_genomes_project 17 35256365 35264015 + MGP_NODShiLtJ_P0046574 Pram1 protein_coding protein_coding MGP_NODShiLtJ_T0046575.1 MGP_NODShiLtJ_G0023352.1 mouse_genomes_project 17 35256404 35264009 + MGP_NODShiLtJ_P0046575 Pram1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046576.1 MGP_NODShiLtJ_G0023352.1 mouse_genomes_project 17 35263125 35263947 + Pram1 protein_coding retained_intron MGP_NODShiLtJ_T0045398.1 MGP_NODShiLtJ_G0023035.1 mouse_genomes_project 17 20604124 20605021 + MGP_NODShiLtJ_P0045398 Vmn1r226 protein_coding protein_coding MGP_NODShiLtJ_T0045623.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25101605 25122263 - MGP_NODShiLtJ_P0045623 Traf7 protein_coding protein_coding MGP_NODShiLtJ_T0045624.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25101891 25105529 - Traf7 protein_coding retained_intron MGP_NODShiLtJ_T0045625.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25101891 25122175 - MGP_NODShiLtJ_P0045625 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045626.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25101891 25122215 - MGP_NODShiLtJ_P0045626 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045627.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25101891 25113412 - MGP_NODShiLtJ_P0045627 Traf7 protein_coding protein_coding MGP_NODShiLtJ_T0045628.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25101891 25113412 - MGP_NODShiLtJ_P0045628 Traf7 protein_coding protein_coding MGP_NODShiLtJ_T0045629.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25101891 25122171 - MGP_NODShiLtJ_P0045629 Traf7 protein_coding protein_coding MGP_NODShiLtJ_T0045630.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25101895 25104074 - Traf7 protein_coding retained_intron MGP_NODShiLtJ_T0045631.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25103103 25103553 - Traf7 protein_coding retained_intron MGP_NODShiLtJ_T0045632.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25103254 25105413 - Traf7 protein_coding retained_intron MGP_NODShiLtJ_T0045633.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25103526 25105608 - Traf7 protein_coding retained_intron MGP_NODShiLtJ_T0045634.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25104637 25107526 - MGP_NODShiLtJ_P0045634 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045635.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25104728 25108926 - MGP_NODShiLtJ_P0045635 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045636.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25105287 25122188 - MGP_NODShiLtJ_P0045636 Traf7 protein_coding protein_coding MGP_NODShiLtJ_T0045637.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25106818 25107425 - Traf7 protein_coding retained_intron MGP_NODShiLtJ_T0045638.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25107245 25121814 - MGP_NODShiLtJ_P0045638 Traf7 protein_coding protein_coding MGP_NODShiLtJ_T0045639.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25107428 25122171 - MGP_NODShiLtJ_P0045639 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045640.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25107440 25122158 - MGP_NODShiLtJ_P0045640 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045641.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25107447 25122236 - MGP_NODShiLtJ_P0045641 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045642.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25107523 25121873 - MGP_NODShiLtJ_P0045642 Traf7 protein_coding protein_coding MGP_NODShiLtJ_T0045643.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25108107 25122171 - MGP_NODShiLtJ_P0045643 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045644.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25108906 25122146 - MGP_NODShiLtJ_P0045644 Traf7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045645.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25110494 25122175 - Traf7 protein_coding retained_intron MGP_NODShiLtJ_T0045646.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25110759 25122193 - Traf7 protein_coding processed_transcript MGP_NODShiLtJ_T0045647.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25112575 25122176 - Traf7 protein_coding processed_transcript MGP_NODShiLtJ_T0045648.1 MGP_NODShiLtJ_G0023124.1 mouse_genomes_project 17 25112776 25122109 - Traf7 protein_coding retained_intron MGP_NODShiLtJ_T0046765.1 MGP_NODShiLtJ_G0023387.1 mouse_genomes_project 17 35940150 35943439 - MGP_NODShiLtJ_P0046765 Gm15821 protein_coding protein_coding MGP_NODShiLtJ_T0045389.1 MGP_NODShiLtJ_G0023026.1 mouse_genomes_project 17 19958293 19986856 - MGP_NODShiLtJ_P0045389 Vmn2r105 protein_coding protein_coding MGP_NODShiLtJ_T0013156.1 MGP_NODShiLtJ_G0011264.1 mouse_genomes_project 17 59250823 59251198 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006833.1 MGP_NODShiLtJ_G0005620.1 mouse_genomes_project 17 6924421 6946955 - 6530411M01Rik lincRNA lincRNA MGP_NODShiLtJ_T0046464.1 MGP_NODShiLtJ_G0023318.1 mouse_genomes_project 17 33758229 33775615 - MGP_NODShiLtJ_P0046464 Akap8 protein_coding protein_coding MGP_NODShiLtJ_T0048020.1 MGP_NODShiLtJ_G0023770.1 mouse_genomes_project 17 62876322 62891488 - MGP_NODShiLtJ_P0048020 Khsrp protein_coding protein_coding MGP_NODShiLtJ_T0045689.1 MGP_NODShiLtJ_G0023139.1 mouse_genomes_project 17 25338536 25348588 + MGP_NODShiLtJ_P0045689 Rpl3l protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045690.1 MGP_NODShiLtJ_G0023139.1 mouse_genomes_project 17 25338708 25348583 + MGP_NODShiLtJ_P0045690 Rpl3l protein_coding protein_coding MGP_NODShiLtJ_T0045691.1 MGP_NODShiLtJ_G0023139.1 mouse_genomes_project 17 25339062 25345805 + MGP_NODShiLtJ_P0045691 Rpl3l protein_coding protein_coding MGP_NODShiLtJ_T0045692.1 MGP_NODShiLtJ_G0023139.1 mouse_genomes_project 17 25345124 25348583 + MGP_NODShiLtJ_P0045692 Rpl3l protein_coding protein_coding MGP_NODShiLtJ_T0048341.1 MGP_NODShiLtJ_G0023877.1 mouse_genomes_project 17 89772983 89780200 - MGP_NODShiLtJ_P0048341 Srsf7 protein_coding protein_coding MGP_NODShiLtJ_T0010128.1 MGP_NODShiLtJ_G0008261.1 mouse_genomes_project 17 78998865 78998963 - Mir1195 miRNA miRNA MGP_NODShiLtJ_T0101721.1 MGP_NODShiLtJ_G0039890.1 mouse_genomes_project 17 36124331 36131739 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045222.1 MGP_NODShiLtJ_G0022968.1 mouse_genomes_project 17 10151999 10246849 + MGP_NODShiLtJ_P0045222 Agpat4 protein_coding protein_coding MGP_NODShiLtJ_T0045223.1 MGP_NODShiLtJ_G0022968.1 mouse_genomes_project 17 10152601 10255798 + MGP_NODShiLtJ_P0045223 Agpat4 protein_coding protein_coding MGP_NODShiLtJ_T0045224.1 MGP_NODShiLtJ_G0022968.1 mouse_genomes_project 17 10152623 10173790 + Agpat4 protein_coding processed_transcript MGP_NODShiLtJ_T0045225.1 MGP_NODShiLtJ_G0022968.1 mouse_genomes_project 17 10167341 10246500 + MGP_NODShiLtJ_P0045225 Agpat4 protein_coding protein_coding MGP_NODShiLtJ_T0045226.1 MGP_NODShiLtJ_G0022968.1 mouse_genomes_project 17 10185875 10255216 + MGP_NODShiLtJ_P0045226 Agpat4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045227.1 MGP_NODShiLtJ_G0022968.1 mouse_genomes_project 17 10251261 10255390 + Agpat4 protein_coding retained_intron MGP_NODShiLtJ_T0047950.1 MGP_NODShiLtJ_G0023744.1 mouse_genomes_project 17 62088105 62094278 - MGP_NODShiLtJ_P0047950 Arrdc5 protein_coding protein_coding MGP_NODShiLtJ_T0045882.1 MGP_NODShiLtJ_G0023185.1 mouse_genomes_project 17 26458669 26462579 + MGP_NODShiLtJ_P0045882 Ccdc78 protein_coding protein_coding MGP_NODShiLtJ_T0047127.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37665372 37671387 - MGP_NODShiLtJ_P0047127 Gtf2h4 protein_coding protein_coding MGP_NODShiLtJ_T0047128.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37665380 37666416 - Gtf2h4 protein_coding retained_intron MGP_NODShiLtJ_T0047129.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37665381 37667495 - Gtf2h4 protein_coding retained_intron MGP_NODShiLtJ_T0047130.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37665383 37671266 - MGP_NODShiLtJ_P0047130 Gtf2h4 protein_coding protein_coding MGP_NODShiLtJ_T0047131.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37665484 37671351 - MGP_NODShiLtJ_P0047131 Gtf2h4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047132.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37668028 37671336 - Gtf2h4 protein_coding retained_intron MGP_NODShiLtJ_T0047133.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37668385 37671338 - MGP_NODShiLtJ_P0047133 Gtf2h4 protein_coding protein_coding MGP_NODShiLtJ_T0047134.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37668986 37671165 - MGP_NODShiLtJ_P0047134 Gtf2h4 protein_coding protein_coding MGP_NODShiLtJ_T0047135.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37669403 37671329 - Gtf2h4 protein_coding retained_intron MGP_NODShiLtJ_T0047136.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37669540 37670946 - Gtf2h4 protein_coding retained_intron MGP_NODShiLtJ_T0047137.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37669690 37671207 - Gtf2h4 protein_coding processed_transcript MGP_NODShiLtJ_T0047138.1 MGP_NODShiLtJ_G0023470.1 mouse_genomes_project 17 37669705 37671307 - MGP_NODShiLtJ_P0047138 Gtf2h4 protein_coding protein_coding MGP_NODShiLtJ_T0006873.1 MGP_NODShiLtJ_G0005651.1 mouse_genomes_project 17 33731788 33752730 + Gm26549 lincRNA lincRNA MGP_NODShiLtJ_T0046454.1 MGP_NODShiLtJ_G0023316.1 mouse_genomes_project 17 33619715 33627097 - MGP_NODShiLtJ_P0046454 Ephx3 protein_coding protein_coding MGP_NODShiLtJ_T0046455.1 MGP_NODShiLtJ_G0023316.1 mouse_genomes_project 17 33620312 33627183 - MGP_NODShiLtJ_P0046455 Ephx3 protein_coding protein_coding MGP_NODShiLtJ_T0048224.1 MGP_NODShiLtJ_G0023833.1 mouse_genomes_project 17 79904753 79920565 + Fam179a protein_coding processed_transcript MGP_NODShiLtJ_T0048225.1 MGP_NODShiLtJ_G0023833.1 mouse_genomes_project 17 79904753 79966583 + MGP_NODShiLtJ_P0048225 Fam179a protein_coding protein_coding MGP_NODShiLtJ_T0048226.1 MGP_NODShiLtJ_G0023833.1 mouse_genomes_project 17 79904757 79924551 + Fam179a protein_coding processed_transcript MGP_NODShiLtJ_T0048227.1 MGP_NODShiLtJ_G0023833.1 mouse_genomes_project 17 79920180 79966583 + MGP_NODShiLtJ_P0048227 Fam179a protein_coding protein_coding MGP_NODShiLtJ_T0048228.1 MGP_NODShiLtJ_G0023833.1 mouse_genomes_project 17 79922088 79966457 + MGP_NODShiLtJ_P0048228 Fam179a protein_coding protein_coding MGP_NODShiLtJ_T0048229.1 MGP_NODShiLtJ_G0023833.1 mouse_genomes_project 17 79950029 79966583 + Fam179a protein_coding retained_intron MGP_NODShiLtJ_T0047677.1 MGP_NODShiLtJ_G0023652.1 mouse_genomes_project 17 51151088 51174572 - MGP_NODShiLtJ_P0047677 Ppp2r5d protein_coding protein_coding MGP_NODShiLtJ_T0046975.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36944927 36946191 - Msh5 protein_coding processed_transcript MGP_NODShiLtJ_T0046976.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36944927 36964784 - MGP_NODShiLtJ_P0046976 Msh5 protein_coding protein_coding MGP_NODShiLtJ_T0046977.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36944927 36964896 - MGP_NODShiLtJ_P0046977 Msh5 protein_coding protein_coding MGP_NODShiLtJ_T0046978.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36944931 36949614 - MGP_NODShiLtJ_P0046978 Msh5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046979.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36945005 36964704 - MGP_NODShiLtJ_P0046979 Msh5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046980.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36945005 36964704 - MGP_NODShiLtJ_P0046980 Msh5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046981.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36955294 36964915 - MGP_NODShiLtJ_P0046981 Msh5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046982.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36957347 36961929 - Msh5 protein_coding retained_intron MGP_NODShiLtJ_T0046983.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36957347 36964687 - Msh5 protein_coding retained_intron MGP_NODShiLtJ_T0046984.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36962127 36964278 - Msh5 protein_coding retained_intron MGP_NODShiLtJ_T0046985.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36962136 36963173 - Msh5 protein_coding retained_intron MGP_NODShiLtJ_T0046986.1 MGP_NODShiLtJ_G0023430.1 mouse_genomes_project 17 36962261 36964682 - MGP_NODShiLtJ_P0046986 Msh5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048012.1 MGP_NODShiLtJ_G0023764.1 mouse_genomes_project 17 62742846 62785427 - MGP_NODShiLtJ_P0048012 Mllt1 protein_coding protein_coding MGP_NODShiLtJ_T0047710.1 MGP_NODShiLtJ_G0023666.1 mouse_genomes_project 17 51926790 51934341 + MGP_NODShiLtJ_P0047710 Guca1b protein_coding protein_coding MGP_NODShiLtJ_T0047711.1 MGP_NODShiLtJ_G0023666.1 mouse_genomes_project 17 51926801 51933466 + MGP_NODShiLtJ_P0047711 Guca1b protein_coding protein_coding MGP_NODShiLtJ_T0047399.1 MGP_NODShiLtJ_G0023554.1 mouse_genomes_project 17 40334643 40335765 + MGP_NODShiLtJ_P0047399 Olfr124 protein_coding protein_coding MGP_NODShiLtJ_T0045533.1 MGP_NODShiLtJ_G0023098.1 mouse_genomes_project 17 24368396 24390634 + MGP_NODShiLtJ_P0045533 protein_coding protein_coding MGP_NODShiLtJ_T0045534.1 MGP_NODShiLtJ_G0023098.1 mouse_genomes_project 17 24368397 24370887 + MGP_NODShiLtJ_P0045534 protein_coding protein_coding MGP_NODShiLtJ_T0101771.1 MGP_NODShiLtJ_G0039939.1 mouse_genomes_project 17 59091089 59091709 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045413.1 MGP_NODShiLtJ_G0023044.1 mouse_genomes_project 17 21202855 21203845 + MGP_NODShiLtJ_P0045413 Vmn1r234 protein_coding protein_coding MGP_NODShiLtJ_T0048071.1 MGP_NODShiLtJ_G0023793.1 mouse_genomes_project 17 71318127 71639336 + MGP_NODShiLtJ_P0048071 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048072.1 MGP_NODShiLtJ_G0023793.1 mouse_genomes_project 17 71402970 71636441 + MGP_NODShiLtJ_P0048072 protein_coding protein_coding MGP_NODShiLtJ_T0003716.1 MGP_NODShiLtJ_G0003339.1 mouse_genomes_project 17 49994749 49997435 + Gm16172 antisense antisense MGP_NODShiLtJ_T0046414.1 MGP_NODShiLtJ_G0023307.1 mouse_genomes_project 17 32865576 32877422 + MGP_NODShiLtJ_P0046414 Ndufv3 protein_coding protein_coding MGP_NODShiLtJ_T0046415.1 MGP_NODShiLtJ_G0023307.1 mouse_genomes_project 17 32865611 32873944 + Ndufv3 protein_coding processed_transcript MGP_NODShiLtJ_T0046416.1 MGP_NODShiLtJ_G0023307.1 mouse_genomes_project 17 32865619 32877425 + MGP_NODShiLtJ_P0046416 Ndufv3 protein_coding protein_coding MGP_NODShiLtJ_T0046417.1 MGP_NODShiLtJ_G0023307.1 mouse_genomes_project 17 32865646 32873347 + MGP_NODShiLtJ_P0046417 Ndufv3 protein_coding protein_coding MGP_NODShiLtJ_T0046418.1 MGP_NODShiLtJ_G0023307.1 mouse_genomes_project 17 32875197 32877425 + Ndufv3 protein_coding processed_transcript MGP_NODShiLtJ_T0045724.1 MGP_NODShiLtJ_G0023151.1 mouse_genomes_project 17 25518506 25519539 + MGP_NODShiLtJ_P0045724 Nme3 protein_coding protein_coding MGP_NODShiLtJ_T0045725.1 MGP_NODShiLtJ_G0023151.1 mouse_genomes_project 17 25518511 25519352 + Nme3 protein_coding processed_transcript MGP_NODShiLtJ_T0045726.1 MGP_NODShiLtJ_G0023151.1 mouse_genomes_project 17 25518527 25519261 + Nme3 protein_coding retained_intron MGP_NODShiLtJ_T0045727.1 MGP_NODShiLtJ_G0023151.1 mouse_genomes_project 17 25518529 25519501 + Nme3 protein_coding retained_intron MGP_NODShiLtJ_T0045728.1 MGP_NODShiLtJ_G0023151.1 mouse_genomes_project 17 25518767 25519364 + Nme3 protein_coding retained_intron MGP_NODShiLtJ_T0047364.1 MGP_NODShiLtJ_G0023523.1 mouse_genomes_project 17 39384573 39385658 - MGP_NODShiLtJ_P0047364 protein_coding protein_coding MGP_NODShiLtJ_T0048404.1 MGP_NODShiLtJ_G0023906.1 mouse_genomes_project 17 95175850 95215003 + MGP_NODShiLtJ_P0048404 Slc3a1 protein_coding protein_coding MGP_NODShiLtJ_T0047320.1 MGP_NODShiLtJ_G0023514.1 mouse_genomes_project 17 39217750 39221881 - MGP_NODShiLtJ_P0047320 Znrd1 protein_coding protein_coding MGP_NODShiLtJ_T0047321.1 MGP_NODShiLtJ_G0023514.1 mouse_genomes_project 17 39217752 39221932 - MGP_NODShiLtJ_P0047321 Znrd1 protein_coding protein_coding MGP_NODShiLtJ_T0047322.1 MGP_NODShiLtJ_G0023514.1 mouse_genomes_project 17 39217805 39221717 - MGP_NODShiLtJ_P0047322 Znrd1 protein_coding protein_coding MGP_NODShiLtJ_T0047323.1 MGP_NODShiLtJ_G0023514.1 mouse_genomes_project 17 39217837 39221958 - Znrd1 protein_coding processed_transcript MGP_NODShiLtJ_T0010117.1 MGP_NODShiLtJ_G0008250.1 mouse_genomes_project 17 51009446 51009509 - Mir6976 miRNA miRNA MGP_NODShiLtJ_T0010112.1 MGP_NODShiLtJ_G0008245.1 mouse_genomes_project 17 37886968 37887064 - Gm28033 miRNA miRNA MGP_NODShiLtJ_T0046379.1 MGP_NODShiLtJ_G0023301.1 mouse_genomes_project 17 32476529 32494963 - MGP_NODShiLtJ_P0046379 Tmprss3 protein_coding protein_coding MGP_NODShiLtJ_T0046380.1 MGP_NODShiLtJ_G0023301.1 mouse_genomes_project 17 32476529 32496174 - MGP_NODShiLtJ_P0046380 Tmprss3 protein_coding protein_coding MGP_NODShiLtJ_T0046866.1 MGP_NODShiLtJ_G0023411.1 mouse_genomes_project 17 36609982 36613242 - MGP_NODShiLtJ_P0046866 Cyp21a1 protein_coding protein_coding MGP_NODShiLtJ_T0046867.1 MGP_NODShiLtJ_G0023411.1 mouse_genomes_project 17 36610872 36612075 - Cyp21a1 protein_coding retained_intron MGP_NODShiLtJ_T0046868.1 MGP_NODShiLtJ_G0023411.1 mouse_genomes_project 17 36612245 36613088 - Cyp21a1 protein_coding processed_transcript MGP_NODShiLtJ_T0003672.1 MGP_NODShiLtJ_G0003306.1 mouse_genomes_project 17 27366330 27371053 - Gm17218 antisense antisense MGP_NODShiLtJ_T0101080.1 MGP_NODShiLtJ_G0039436.1 mouse_genomes_project 17 29006296 29012158 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101720.1 MGP_NODShiLtJ_G0039889.1 mouse_genomes_project 17 36076073 36077786 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048077.1 MGP_NODShiLtJ_G0023795.1 mouse_genomes_project 17 72133546 72295580 + MGP_NODShiLtJ_P0048077 Man2a1 protein_coding protein_coding MGP_NODShiLtJ_T0048078.1 MGP_NODShiLtJ_G0023795.1 mouse_genomes_project 17 72253304 72254687 + Man2a1 protein_coding retained_intron MGP_NODShiLtJ_T0048079.1 MGP_NODShiLtJ_G0023795.1 mouse_genomes_project 17 72253503 72295308 + MGP_NODShiLtJ_P0048079 Man2a1 protein_coding protein_coding MGP_NODShiLtJ_T0045532.1 MGP_NODShiLtJ_G0023097.1 mouse_genomes_project 17 24359605 24390658 + MGP_NODShiLtJ_P0045532 Dcpp1 protein_coding protein_coding MGP_NODShiLtJ_T0010122.1 MGP_NODShiLtJ_G0008255.1 mouse_genomes_project 17 63105256 63105313 - Mir6978 miRNA miRNA MGP_NODShiLtJ_T0048419.1 MGP_NODShiLtJ_G0023913.1 mouse_genomes_project 17 96778401 96785899 - MGP_NODShiLtJ_P0048419 Gm10309 protein_coding protein_coding MGP_NODShiLtJ_T0101083.1 MGP_NODShiLtJ_G0039439.1 mouse_genomes_project 17 98579930 98585425 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101084.1 MGP_NODShiLtJ_G0039439.1 mouse_genomes_project 17 98585133 98585532 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0010095.1 MGP_NODShiLtJ_G0008228.1 mouse_genomes_project 17 28222963 28223025 + Mir7217 miRNA miRNA MGP_NODShiLtJ_T0100264.1 MGP_NODShiLtJ_G0038658.1 mouse_genomes_project 17 79857051 79857136 + Snord92 snoRNA snoRNA MGP_NODShiLtJ_T0047099.1 MGP_NODShiLtJ_G0023462.1 mouse_genomes_project 17 37502436 37519809 + MGP_NODShiLtJ_P0047099 Cchcr1 protein_coding protein_coding MGP_NODShiLtJ_T0047100.1 MGP_NODShiLtJ_G0023462.1 mouse_genomes_project 17 37502452 37508127 + Cchcr1 protein_coding retained_intron MGP_NODShiLtJ_T0047101.1 MGP_NODShiLtJ_G0023462.1 mouse_genomes_project 17 37502512 37519828 + MGP_NODShiLtJ_P0047101 Cchcr1 protein_coding protein_coding MGP_NODShiLtJ_T0047102.1 MGP_NODShiLtJ_G0023462.1 mouse_genomes_project 17 37502799 37519818 + MGP_NODShiLtJ_P0047102 Cchcr1 protein_coding protein_coding MGP_NODShiLtJ_T0047103.1 MGP_NODShiLtJ_G0023462.1 mouse_genomes_project 17 37507523 37508758 + Cchcr1 protein_coding processed_transcript MGP_NODShiLtJ_T0047104.1 MGP_NODShiLtJ_G0023462.1 mouse_genomes_project 17 37513491 37514244 + Cchcr1 protein_coding retained_intron MGP_NODShiLtJ_T0047105.1 MGP_NODShiLtJ_G0023462.1 mouse_genomes_project 17 37517709 37518246 + Cchcr1 protein_coding retained_intron MGP_NODShiLtJ_T0097972.1 MGP_NODShiLtJ_G0036384.1 mouse_genomes_project 17 48885359 48885478 - n-R5s27 rRNA rRNA MGP_NODShiLtJ_T0010079.1 MGP_NODShiLtJ_G0008212.1 mouse_genomes_project 17 24299928 24300007 + Mir5125 miRNA miRNA MGP_NODShiLtJ_T0047661.1 MGP_NODShiLtJ_G0023646.1 mouse_genomes_project 17 51097283 51111842 - MGP_NODShiLtJ_P0047661 Klc4 protein_coding protein_coding MGP_NODShiLtJ_T0099008.1 MGP_NODShiLtJ_G0037402.1 mouse_genomes_project 17 65799302 65799409 - Gm23203 snRNA snRNA MGP_NODShiLtJ_T0047678.1 MGP_NODShiLtJ_G0023653.1 mouse_genomes_project 17 51181044 51195137 + Pex6 protein_coding retained_intron MGP_NODShiLtJ_T0047679.1 MGP_NODShiLtJ_G0023653.1 mouse_genomes_project 17 51181044 51195137 + MGP_NODShiLtJ_P0047679 Pex6 protein_coding protein_coding MGP_NODShiLtJ_T0047680.1 MGP_NODShiLtJ_G0023653.1 mouse_genomes_project 17 51181057 51187023 + Pex6 protein_coding processed_transcript MGP_NODShiLtJ_T0047681.1 MGP_NODShiLtJ_G0023653.1 mouse_genomes_project 17 51189789 51191333 + Pex6 protein_coding retained_intron MGP_NODShiLtJ_T0045395.1 MGP_NODShiLtJ_G0023032.1 mouse_genomes_project 17 20382067 20382964 + MGP_NODShiLtJ_P0045395 Vmn1r225 protein_coding protein_coding MGP_NODShiLtJ_T0047719.1 MGP_NODShiLtJ_G0023670.1 mouse_genomes_project 17 52040636 52054552 - MGP_NODShiLtJ_P0047719 Taf8 protein_coding protein_coding MGP_NODShiLtJ_T0045354.1 MGP_NODShiLtJ_G0023007.1 mouse_genomes_project 17 16629776 16667605 + MGP_NODShiLtJ_P0045354 Vmn2r90 protein_coding protein_coding MGP_NODShiLtJ_T0003675.1 MGP_NODShiLtJ_G0003309.1 mouse_genomes_project 17 28889827 28895469 - Gm15597 antisense antisense MGP_NODShiLtJ_T0003732.1 MGP_NODShiLtJ_G0003351.1 mouse_genomes_project 17 79953606 79954575 - Gm15641 antisense antisense MGP_NODShiLtJ_T0046453.1 MGP_NODShiLtJ_G0023315.1 mouse_genomes_project 17 33547992 33601095 - MGP_NODShiLtJ_P0046453 Notch3 protein_coding protein_coding MGP_NODShiLtJ_T0047899.1 MGP_NODShiLtJ_G0023716.1 mouse_genomes_project 17 59299088 59330667 - MGP_NODShiLtJ_P0047899 Sult1c1 protein_coding protein_coding MGP_NODShiLtJ_T0046844.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36430887 36442612 - MGP_NODShiLtJ_P0046844 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046845.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36430888 36442554 - MGP_NODShiLtJ_P0046845 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046846.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36430889 36442325 - MGP_NODShiLtJ_P0046846 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046847.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36431454 36443752 - MGP_NODShiLtJ_P0046847 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046848.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36431454 36444266 - MGP_NODShiLtJ_P0046848 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046849.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36431454 36443712 - MGP_NODShiLtJ_P0046849 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046850.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36431539 36442105 - MGP_NODShiLtJ_P0046850 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046851.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36436943 36444737 - MGP_NODShiLtJ_P0046851 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046852.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36437139 36442603 - MGP_NODShiLtJ_P0046852 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0046853.1 MGP_NODShiLtJ_G0023405.1 mouse_genomes_project 17 36441665 36442327 - MGP_NODShiLtJ_P0046853 Ppt2 protein_coding protein_coding MGP_NODShiLtJ_T0047947.1 MGP_NODShiLtJ_G0023741.1 mouse_genomes_project 17 62046050 62053548 + MGP_NODShiLtJ_P0047947 4931440F15Rik protein_coding protein_coding MGP_NODShiLtJ_T0010109.1 MGP_NODShiLtJ_G0008242.1 mouse_genomes_project 17 37139782 37139865 - Mir6974 miRNA miRNA MGP_NODShiLtJ_T0047547.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 49991401 50019947 - MGP_NODShiLtJ_P0047547 Tmem63b protein_coding protein_coding MGP_NODShiLtJ_T0047548.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 49994239 49996429 - Tmem63b protein_coding retained_intron MGP_NODShiLtJ_T0047549.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 49995333 49997680 - Tmem63b protein_coding retained_intron MGP_NODShiLtJ_T0047550.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 49998939 50019661 - MGP_NODShiLtJ_P0047550 Tmem63b protein_coding protein_coding MGP_NODShiLtJ_T0047551.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 50001239 50020593 - MGP_NODShiLtJ_P0047551 Tmem63b protein_coding protein_coding MGP_NODShiLtJ_T0047552.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 50004982 50014311 - MGP_NODShiLtJ_P0047552 Tmem63b protein_coding protein_coding MGP_NODShiLtJ_T0047553.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 50005212 50019825 - MGP_NODShiLtJ_P0047553 Tmem63b protein_coding protein_coding MGP_NODShiLtJ_T0047554.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 50012647 50019808 - MGP_NODShiLtJ_P0047554 Tmem63b protein_coding protein_coding MGP_NODShiLtJ_T0047555.1 MGP_NODShiLtJ_G0023621.1 mouse_genomes_project 17 50019911 50020575 - Tmem63b protein_coding processed_transcript MGP_NODShiLtJ_T0047293.1 MGP_NODShiLtJ_G0023505.1 mouse_genomes_project 17 39023310 39027180 + MGP_NODShiLtJ_P0047293 H2-M10.5 protein_coding protein_coding MGP_NODShiLtJ_T0045703.1 MGP_NODShiLtJ_G0023145.1 mouse_genomes_project 17 25500814 25504054 + MGP_NODShiLtJ_P0045703 Igfals protein_coding protein_coding MGP_NODShiLtJ_T0047365.1 MGP_NODShiLtJ_G0023524.1 mouse_genomes_project 17 39450176 39451224 - MGP_NODShiLtJ_P0047365 Olfr93 protein_coding protein_coding MGP_NODShiLtJ_T0045785.1 MGP_NODShiLtJ_G0023161.1 mouse_genomes_project 17 25818822 25872385 + MGP_NODShiLtJ_P0045785 protein_coding protein_coding MGP_NODShiLtJ_T0045786.1 MGP_NODShiLtJ_G0023161.1 mouse_genomes_project 17 25818841 25868111 + MGP_NODShiLtJ_P0045786 protein_coding protein_coding MGP_NODShiLtJ_T0045787.1 MGP_NODShiLtJ_G0023161.1 mouse_genomes_project 17 25819910 25836949 + MGP_NODShiLtJ_P0045787 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045788.1 MGP_NODShiLtJ_G0023161.1 mouse_genomes_project 17 25841883 25844579 + protein_coding retained_intron MGP_NODShiLtJ_T0045789.1 MGP_NODShiLtJ_G0023161.1 mouse_genomes_project 17 25858845 25865698 + MGP_NODShiLtJ_P0045789 protein_coding protein_coding MGP_NODShiLtJ_T0045790.1 MGP_NODShiLtJ_G0023161.1 mouse_genomes_project 17 25858888 25872384 + MGP_NODShiLtJ_P0045790 protein_coding protein_coding MGP_NODShiLtJ_T0045792.1 MGP_NODShiLtJ_G0023161.1 mouse_genomes_project 17 25859085 25869809 + MGP_NODShiLtJ_P0045792 protein_coding protein_coding MGP_NODShiLtJ_T0048304.1 MGP_NODShiLtJ_G0023863.1 mouse_genomes_project 17 88320292 88355759 - MGP_NODShiLtJ_P0048304 Eif2ak2 protein_coding protein_coding MGP_NODShiLtJ_T0048305.1 MGP_NODShiLtJ_G0023863.1 mouse_genomes_project 17 88321934 88325565 - Eif2ak2 protein_coding processed_transcript MGP_NODShiLtJ_T0048306.1 MGP_NODShiLtJ_G0023863.1 mouse_genomes_project 17 88345770 88355734 - Eif2ak2 protein_coding processed_transcript MGP_NODShiLtJ_T0048307.1 MGP_NODShiLtJ_G0023863.1 mouse_genomes_project 17 88351156 88355740 - Eif2ak2 protein_coding processed_transcript MGP_NODShiLtJ_T0003707.1 MGP_NODShiLtJ_G0003333.1 mouse_genomes_project 17 39186437 39197024 + 1700031A10Rik antisense antisense MGP_NODShiLtJ_T0045617.1 MGP_NODShiLtJ_G0023120.1 mouse_genomes_project 17 25059049 25060168 + MGP_NODShiLtJ_P0045617 Pgp protein_coding protein_coding MGP_NODShiLtJ_T0048401.1 MGP_NODShiLtJ_G0023905.1 mouse_genomes_project 17 95091709 95171495 + MGP_NODShiLtJ_P0048401 Ppm1b protein_coding protein_coding MGP_NODShiLtJ_T0048402.1 MGP_NODShiLtJ_G0023905.1 mouse_genomes_project 17 95095436 95162293 + MGP_NODShiLtJ_P0048402 Ppm1b protein_coding protein_coding MGP_NODShiLtJ_T0048403.1 MGP_NODShiLtJ_G0023905.1 mouse_genomes_project 17 95133364 95171495 + MGP_NODShiLtJ_P0048403 Ppm1b protein_coding protein_coding MGP_NODShiLtJ_T0045351.1 MGP_NODShiLtJ_G0023005.1 mouse_genomes_project 17 16247546 16310191 + MGP_NODShiLtJ_P0045351 Lix1 protein_coding protein_coding MGP_NODShiLtJ_T0045352.1 MGP_NODShiLtJ_G0023005.1 mouse_genomes_project 17 16295216 16310191 + Lix1 protein_coding processed_transcript MGP_NODShiLtJ_T0045970.1 MGP_NODShiLtJ_G0023205.1 mouse_genomes_project 17 26673468 26706716 - MGP_NODShiLtJ_P0045970 Rab11fip3 protein_coding protein_coding MGP_NODShiLtJ_T0045971.1 MGP_NODShiLtJ_G0023205.1 mouse_genomes_project 17 26673468 26758605 - MGP_NODShiLtJ_P0045971 Rab11fip3 protein_coding protein_coding MGP_NODShiLtJ_T0045972.1 MGP_NODShiLtJ_G0023205.1 mouse_genomes_project 17 26673477 26758837 - MGP_NODShiLtJ_P0045972 Rab11fip3 protein_coding protein_coding MGP_NODShiLtJ_T0045973.1 MGP_NODShiLtJ_G0023205.1 mouse_genomes_project 17 26688618 26706674 - Rab11fip3 protein_coding retained_intron MGP_NODShiLtJ_T0045974.1 MGP_NODShiLtJ_G0023205.1 mouse_genomes_project 17 26698713 26703329 - MGP_NODShiLtJ_P0045974 Rab11fip3 protein_coding protein_coding MGP_NODShiLtJ_T0045975.1 MGP_NODShiLtJ_G0023205.1 mouse_genomes_project 17 26721159 26758663 - Rab11fip3 protein_coding processed_transcript MGP_NODShiLtJ_T0046304.1 MGP_NODShiLtJ_G0023278.1 mouse_genomes_project 17 30384852 30422895 + MGP_NODShiLtJ_P0046304 BC004004 protein_coding protein_coding MGP_NODShiLtJ_T0046305.1 MGP_NODShiLtJ_G0023278.1 mouse_genomes_project 17 30384907 30421535 + MGP_NODShiLtJ_P0046305 BC004004 protein_coding protein_coding MGP_NODShiLtJ_T0046306.1 MGP_NODShiLtJ_G0023278.1 mouse_genomes_project 17 30385015 30401435 + BC004004 protein_coding retained_intron MGP_NODShiLtJ_T0046307.1 MGP_NODShiLtJ_G0023278.1 mouse_genomes_project 17 30390060 30421539 + MGP_NODShiLtJ_P0046307 BC004004 protein_coding protein_coding MGP_NODShiLtJ_T0046308.1 MGP_NODShiLtJ_G0023278.1 mouse_genomes_project 17 30416940 30421539 + BC004004 protein_coding processed_transcript MGP_NODShiLtJ_T0047397.1 MGP_NODShiLtJ_G0023552.1 mouse_genomes_project 17 40280728 40286020 + MGP_NODShiLtJ_P0047397 protein_coding protein_coding MGP_NODShiLtJ_T0046969.1 MGP_NODShiLtJ_G0023428.1 mouse_genomes_project 17 36931321 36941473 + MGP_NODShiLtJ_P0046969 Vwa7 protein_coding protein_coding MGP_NODShiLtJ_T0046970.1 MGP_NODShiLtJ_G0023428.1 mouse_genomes_project 17 36931380 36941252 + MGP_NODShiLtJ_P0046970 Vwa7 protein_coding protein_coding MGP_NODShiLtJ_T0045428.1 MGP_NODShiLtJ_G0023056.1 mouse_genomes_project 17 21753974 21754229 + MGP_NODShiLtJ_P0045428 Gm10226 protein_coding protein_coding MGP_NODShiLtJ_T0045150.1 MGP_NODShiLtJ_G0022945.1 mouse_genomes_project 17 4435250 4604482 + MGP_NODShiLtJ_P0045150 protein_coding protein_coding MGP_NODShiLtJ_T0006865.1 MGP_NODShiLtJ_G0005647.1 mouse_genomes_project 17 30212293 30240838 + Gm16194 lincRNA lincRNA MGP_NODShiLtJ_T0006866.1 MGP_NODShiLtJ_G0005647.1 mouse_genomes_project 17 30212318 30240844 + Gm16194 lincRNA lincRNA MGP_NODShiLtJ_T0006867.1 MGP_NODShiLtJ_G0005647.1 mouse_genomes_project 17 30212329 30223688 + Gm16194 lincRNA lincRNA MGP_NODShiLtJ_T0006868.1 MGP_NODShiLtJ_G0005647.1 mouse_genomes_project 17 30212347 30240956 + Gm16194 lincRNA lincRNA MGP_NODShiLtJ_T0006832.1 MGP_NODShiLtJ_G0005619.1 mouse_genomes_project 17 6081509 6093067 - Gm16702 lincRNA lincRNA MGP_NODShiLtJ_T0045137.1 MGP_NODShiLtJ_G0022940.1 mouse_genomes_project 17 3425781 3456750 + Tulp4 protein_coding processed_transcript MGP_NODShiLtJ_T0045138.1 MGP_NODShiLtJ_G0022940.1 mouse_genomes_project 17 3425823 3532144 + MGP_NODShiLtJ_P0045138 Tulp4 protein_coding protein_coding MGP_NODShiLtJ_T0045139.1 MGP_NODShiLtJ_G0022940.1 mouse_genomes_project 17 3440861 3443448 + Tulp4 protein_coding processed_transcript MGP_NODShiLtJ_T0045140.1 MGP_NODShiLtJ_G0022940.1 mouse_genomes_project 17 3455168 3456747 + Tulp4 protein_coding processed_transcript MGP_NODShiLtJ_T0045141.1 MGP_NODShiLtJ_G0022940.1 mouse_genomes_project 17 3456105 3569031 + MGP_NODShiLtJ_P0045141 Tulp4 protein_coding protein_coding MGP_NODShiLtJ_T0045142.1 MGP_NODShiLtJ_G0022940.1 mouse_genomes_project 17 3497406 3551869 + MGP_NODShiLtJ_P0045142 Tulp4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045143.1 MGP_NODShiLtJ_G0022940.1 mouse_genomes_project 17 3497406 3569031 + MGP_NODShiLtJ_P0045143 Tulp4 protein_coding protein_coding MGP_NODShiLtJ_T0045190.1 MGP_NODShiLtJ_G0022959.1 mouse_genomes_project 17 6040175 6043909 + MGP_NODShiLtJ_P0045190 Prr18 protein_coding protein_coding MGP_NODShiLtJ_T0045191.1 MGP_NODShiLtJ_G0022959.1 mouse_genomes_project 17 6040508 6043909 + MGP_NODShiLtJ_P0045191 Prr18 protein_coding protein_coding MGP_NODShiLtJ_T0099013.1 MGP_NODShiLtJ_G0037407.1 mouse_genomes_project 17 89589813 89589909 + Gm22215 snRNA snRNA MGP_NODShiLtJ_T0047615.1 MGP_NODShiLtJ_G0023634.1 mouse_genomes_project 17 50684341 50709486 - MGP_NODShiLtJ_P0047615 Tjap1 protein_coding protein_coding MGP_NODShiLtJ_T0047616.1 MGP_NODShiLtJ_G0023634.1 mouse_genomes_project 17 50684341 50709486 - MGP_NODShiLtJ_P0047616 Tjap1 protein_coding protein_coding MGP_NODShiLtJ_T0047617.1 MGP_NODShiLtJ_G0023634.1 mouse_genomes_project 17 50684341 50709486 - MGP_NODShiLtJ_P0047617 Tjap1 protein_coding protein_coding MGP_NODShiLtJ_T0047618.1 MGP_NODShiLtJ_G0023634.1 mouse_genomes_project 17 50687201 50690288 - MGP_NODShiLtJ_P0047618 Tjap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047349.1 MGP_NODShiLtJ_G0023519.1 mouse_genomes_project 17 39279313 39292732 - MGP_NODShiLtJ_P0047349 Mog protein_coding protein_coding MGP_NODShiLtJ_T0047350.1 MGP_NODShiLtJ_G0023519.1 mouse_genomes_project 17 39280071 39292533 - MGP_NODShiLtJ_P0047350 Mog protein_coding protein_coding MGP_NODShiLtJ_T0047580.1 MGP_NODShiLtJ_G0023627.1 mouse_genomes_project 17 50545815 50563017 - MGP_NODShiLtJ_P0047580 Mad2l1bp protein_coding protein_coding MGP_NODShiLtJ_T0013096.1 MGP_NODShiLtJ_G0011204.1 mouse_genomes_project 17 14028938 14030630 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101749.1 MGP_NODShiLtJ_G0039917.1 mouse_genomes_project 17 38827926 38828073 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0003722.1 MGP_NODShiLtJ_G0003343.1 mouse_genomes_project 17 54724187 54725413 - Gm16554 antisense antisense MGP_NODShiLtJ_T0101759.1 MGP_NODShiLtJ_G0039927.1 mouse_genomes_project 17 39604346 39605804 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047428.1 MGP_NODShiLtJ_G0023579.1 mouse_genomes_project 17 44159657 44164075 + MGP_NODShiLtJ_P0047428 Esp6 protein_coding protein_coding MGP_NODShiLtJ_T0013134.1 MGP_NODShiLtJ_G0011242.1 mouse_genomes_project 17 40418653 40419311 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048116.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74049061 74165960 - MGP_NODShiLtJ_P0048116 Mtcl1 protein_coding protein_coding MGP_NODShiLtJ_T0048117.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74049065 74165960 - MGP_NODShiLtJ_P0048117 Mtcl1 protein_coding protein_coding MGP_NODShiLtJ_T0048118.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74049067 74098583 - MGP_NODShiLtJ_P0048118 Mtcl1 protein_coding protein_coding MGP_NODShiLtJ_T0048119.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74049757 74155307 - MGP_NODShiLtJ_P0048119 Mtcl1 protein_coding protein_coding MGP_NODShiLtJ_T0048120.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74056005 74058613 - Mtcl1 protein_coding retained_intron MGP_NODShiLtJ_T0048121.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74060033 74091716 - Mtcl1 protein_coding retained_intron MGP_NODShiLtJ_T0048122.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74066261 74074779 - Mtcl1 protein_coding processed_transcript MGP_NODShiLtJ_T0048123.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74066426 74091235 - Mtcl1 protein_coding processed_transcript MGP_NODShiLtJ_T0048124.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74070095 74090849 - Mtcl1 protein_coding retained_intron MGP_NODShiLtJ_T0048125.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74078340 74087467 - Mtcl1 protein_coding processed_transcript MGP_NODShiLtJ_T0048126.1 MGP_NODShiLtJ_G0023808.1 mouse_genomes_project 17 74098417 74164579 - Mtcl1 protein_coding retained_intron MGP_NODShiLtJ_T0006890.1 MGP_NODShiLtJ_G0005666.1 mouse_genomes_project 17 39477125 39497370 - Gm20497 lincRNA lincRNA MGP_NODShiLtJ_T0046206.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29327115 29330669 - Tulp1 protein_coding retained_intron MGP_NODShiLtJ_T0046207.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29327115 29340752 - MGP_NODShiLtJ_P0046207 Tulp1 protein_coding protein_coding MGP_NODShiLtJ_T0046208.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29327116 29334287 - MGP_NODShiLtJ_P0046208 Tulp1 protein_coding protein_coding MGP_NODShiLtJ_T0046209.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29327454 29334255 - MGP_NODShiLtJ_P0046209 Tulp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046210.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29328130 29338523 - Tulp1 protein_coding retained_intron MGP_NODShiLtJ_T0046211.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29328138 29331979 - Tulp1 protein_coding retained_intron MGP_NODShiLtJ_T0046212.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29328662 29334768 - MGP_NODShiLtJ_P0046212 Tulp1 protein_coding protein_coding MGP_NODShiLtJ_T0046213.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29331419 29340786 - MGP_NODShiLtJ_P0046213 Tulp1 protein_coding protein_coding MGP_NODShiLtJ_T0046214.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29334042 29338035 - Tulp1 protein_coding retained_intron MGP_NODShiLtJ_T0046215.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29337188 29338560 - Tulp1 protein_coding retained_intron MGP_NODShiLtJ_T0046216.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29338297 29340750 - Tulp1 protein_coding retained_intron MGP_NODShiLtJ_T0046217.1 MGP_NODShiLtJ_G0023257.1 mouse_genomes_project 17 29339289 29340743 - Tulp1 protein_coding retained_intron MGP_NODShiLtJ_T0045467.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24060237 24072198 + MGP_NODShiLtJ_P0045467 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045468.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24060237 24072191 + MGP_NODShiLtJ_P0045468 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045469.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24060237 24072191 + MGP_NODShiLtJ_P0045469 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045470.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24060243 24072001 + MGP_NODShiLtJ_P0045470 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045471.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24060243 24072001 + MGP_NODShiLtJ_P0045471 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045472.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24060322 24070880 + MGP_NODShiLtJ_P0045472 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045473.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24066661 24068355 + Zscan10 protein_coding retained_intron MGP_NODShiLtJ_T0045474.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24066685 24070876 + MGP_NODShiLtJ_P0045474 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045475.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24066694 24070876 + MGP_NODShiLtJ_P0045475 Zscan10 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045476.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24066694 24070877 + MGP_NODShiLtJ_P0045476 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045477.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24066695 24070877 + MGP_NODShiLtJ_P0045477 Zscan10 protein_coding protein_coding MGP_NODShiLtJ_T0045478.1 MGP_NODShiLtJ_G0023077.1 mouse_genomes_project 17 24068674 24070876 + Zscan10 protein_coding retained_intron MGP_NODShiLtJ_T0099011.1 MGP_NODShiLtJ_G0037405.1 mouse_genomes_project 17 81345239 81345346 + Gm23649 snRNA snRNA MGP_NODShiLtJ_T0006896.1 MGP_NODShiLtJ_G0005671.1 mouse_genomes_project 17 50918778 51306885 + lincRNA lincRNA MGP_NODShiLtJ_T0101739.1 MGP_NODShiLtJ_G0039907.1 mouse_genomes_project 17 38385112 38389474 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0013123.1 MGP_NODShiLtJ_G0011231.1 mouse_genomes_project 17 38412923 38413594 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046229.1 MGP_NODShiLtJ_G0023263.1 mouse_genomes_project 17 29598381 29646868 - MGP_NODShiLtJ_P0046229 Srpk1 protein_coding protein_coding MGP_NODShiLtJ_T0046230.1 MGP_NODShiLtJ_G0023263.1 mouse_genomes_project 17 29600206 29620592 - MGP_NODShiLtJ_P0046230 Srpk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046231.1 MGP_NODShiLtJ_G0023263.1 mouse_genomes_project 17 29600604 29603041 - Srpk1 protein_coding retained_intron MGP_NODShiLtJ_T0046232.1 MGP_NODShiLtJ_G0023263.1 mouse_genomes_project 17 29606088 29612362 - Srpk1 protein_coding retained_intron MGP_NODShiLtJ_T0046233.1 MGP_NODShiLtJ_G0023263.1 mouse_genomes_project 17 29611811 29612739 - Srpk1 protein_coding retained_intron MGP_NODShiLtJ_T0046234.1 MGP_NODShiLtJ_G0023263.1 mouse_genomes_project 17 29614022 29646798 - Srpk1 protein_coding retained_intron MGP_NODShiLtJ_T0046235.1 MGP_NODShiLtJ_G0023263.1 mouse_genomes_project 17 29644489 29646819 - MGP_NODShiLtJ_P0046235 Srpk1 protein_coding protein_coding MGP_NODShiLtJ_T0047406.1 MGP_NODShiLtJ_G0023561.1 mouse_genomes_project 17 40637820 40638916 + MGP_NODShiLtJ_P0047406 protein_coding protein_coding MGP_NODShiLtJ_T0017420.1 MGP_NODShiLtJ_G0015214.1 mouse_genomes_project 17 31069657 31077666 + Gm16758 processed_transcript processed_transcript MGP_NODShiLtJ_T0013105.1 MGP_NODShiLtJ_G0011213.1 mouse_genomes_project 17 25965711 25968320 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047666.1 MGP_NODShiLtJ_G0023648.1 mouse_genomes_project 17 51117035 51132058 + MGP_NODShiLtJ_P0047666 Cul7 protein_coding protein_coding MGP_NODShiLtJ_T0047667.1 MGP_NODShiLtJ_G0023648.1 mouse_genomes_project 17 51117261 51121569 + Cul7 protein_coding retained_intron MGP_NODShiLtJ_T0047668.1 MGP_NODShiLtJ_G0023648.1 mouse_genomes_project 17 51117270 51124672 + Cul7 protein_coding retained_intron MGP_NODShiLtJ_T0047669.1 MGP_NODShiLtJ_G0023648.1 mouse_genomes_project 17 51118121 51132058 + MGP_NODShiLtJ_P0047669 Cul7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047670.1 MGP_NODShiLtJ_G0023648.1 mouse_genomes_project 17 51119572 51123242 + Cul7 protein_coding processed_transcript MGP_NODShiLtJ_T0047671.1 MGP_NODShiLtJ_G0023648.1 mouse_genomes_project 17 51119614 51132058 + MGP_NODShiLtJ_P0047671 Cul7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047672.1 MGP_NODShiLtJ_G0023648.1 mouse_genomes_project 17 51129472 51132058 + Cul7 protein_coding retained_intron MGP_NODShiLtJ_T0047167.1 MGP_NODShiLtJ_G0023475.1 mouse_genomes_project 17 37858269 37878357 + MGP_NODShiLtJ_P0047167 Mdc1 protein_coding protein_coding MGP_NODShiLtJ_T0047168.1 MGP_NODShiLtJ_G0023475.1 mouse_genomes_project 17 37858397 37878363 + MGP_NODShiLtJ_P0047168 Mdc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047169.1 MGP_NODShiLtJ_G0023475.1 mouse_genomes_project 17 37858430 37862770 + MGP_NODShiLtJ_P0047169 Mdc1 protein_coding protein_coding MGP_NODShiLtJ_T0046540.1 MGP_NODShiLtJ_G0023342.1 mouse_genomes_project 17 34726999 34728141 + MGP_NODShiLtJ_P0046540 protein_coding protein_coding MGP_NODShiLtJ_T0046506.1 MGP_NODShiLtJ_G0023329.1 mouse_genomes_project 17 34266138 34285172 - MGP_NODShiLtJ_P0046506 Zfp871 protein_coding protein_coding MGP_NODShiLtJ_T0046507.1 MGP_NODShiLtJ_G0023329.1 mouse_genomes_project 17 34272302 34285282 - Zfp871 protein_coding processed_transcript MGP_NODShiLtJ_T0097971.1 MGP_NODShiLtJ_G0036383.1 mouse_genomes_project 17 34302966 34303077 - Gm25555 rRNA rRNA MGP_NODShiLtJ_T0017442.1 MGP_NODShiLtJ_G0015223.1 mouse_genomes_project 17 54233219 54234522 - Gm20540 processed_transcript processed_transcript MGP_NODShiLtJ_T0013144.1 MGP_NODShiLtJ_G0011252.1 mouse_genomes_project 17 52189222 52190791 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010131.1 MGP_NODShiLtJ_G0008264.1 mouse_genomes_project 17 101918195 101918340 + miRNA miRNA MGP_NODShiLtJ_T0013110.1 MGP_NODShiLtJ_G0011218.1 mouse_genomes_project 17 28696436 28698418 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010087.1 MGP_NODShiLtJ_G0008220.1 mouse_genomes_project 17 26505789 26505853 - Mir3082 miRNA miRNA MGP_NODShiLtJ_T0045884.1 MGP_NODShiLtJ_G0023187.1 mouse_genomes_project 17 26466636 26469111 - MGP_NODShiLtJ_P0045884 Metrn protein_coding protein_coding MGP_NODShiLtJ_T0045885.1 MGP_NODShiLtJ_G0023187.1 mouse_genomes_project 17 26467012 26469202 - MGP_NODShiLtJ_P0045885 Metrn protein_coding protein_coding MGP_NODShiLtJ_T0047909.1 MGP_NODShiLtJ_G0023723.1 mouse_genomes_project 17 61705555 61716459 - MGP_NODShiLtJ_P0047909 Zfp119b protein_coding protein_coding MGP_NODShiLtJ_T0010101.1 MGP_NODShiLtJ_G0008234.1 mouse_genomes_project 17 35565908 35565966 - Gm27775 miRNA miRNA MGP_NODShiLtJ_T0047506.1 MGP_NODShiLtJ_G0023614.1 mouse_genomes_project 17 49866009 49873576 - MGP_NODShiLtJ_P0047506 Tmem151b protein_coding protein_coding MGP_NODShiLtJ_T0013183.1 MGP_NODShiLtJ_G0011291.1 mouse_genomes_project 17 102649455 102650682 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045891.1 MGP_NODShiLtJ_G0023190.1 mouse_genomes_project 17 26503291 26506265 + MGP_NODShiLtJ_P0045891 Jmjd8 protein_coding protein_coding MGP_NODShiLtJ_T0045892.1 MGP_NODShiLtJ_G0023190.1 mouse_genomes_project 17 26503467 26506267 + MGP_NODShiLtJ_P0045892 Jmjd8 protein_coding protein_coding MGP_NODShiLtJ_T0045893.1 MGP_NODShiLtJ_G0023190.1 mouse_genomes_project 17 26503488 26504575 + Jmjd8 protein_coding retained_intron MGP_NODShiLtJ_T0045894.1 MGP_NODShiLtJ_G0023190.1 mouse_genomes_project 17 26503495 26505050 + MGP_NODShiLtJ_P0045894 Jmjd8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045895.1 MGP_NODShiLtJ_G0023190.1 mouse_genomes_project 17 26503544 26505058 + MGP_NODShiLtJ_P0045895 Jmjd8 protein_coding protein_coding MGP_NODShiLtJ_T0045896.1 MGP_NODShiLtJ_G0023190.1 mouse_genomes_project 17 26503545 26504786 + Jmjd8 protein_coding retained_intron MGP_NODShiLtJ_T0045897.1 MGP_NODShiLtJ_G0023190.1 mouse_genomes_project 17 26503721 26504951 + Jmjd8 protein_coding retained_intron MGP_NODShiLtJ_T0045898.1 MGP_NODShiLtJ_G0023190.1 mouse_genomes_project 17 26504263 26505146 + Jmjd8 protein_coding retained_intron MGP_NODShiLtJ_T0046641.1 MGP_NODShiLtJ_G0023364.1 mouse_genomes_project 17 35599907 35604415 + MGP_NODShiLtJ_P0046641 Tapbp protein_coding protein_coding MGP_NODShiLtJ_T0046644.1 MGP_NODShiLtJ_G0023364.1 mouse_genomes_project 17 35603338 35613318 + MGP_NODShiLtJ_P0046644 Tapbp protein_coding protein_coding MGP_NODShiLtJ_T0046645.1 MGP_NODShiLtJ_G0023364.1 mouse_genomes_project 17 35603518 35604375 + Tapbp protein_coding retained_intron MGP_NODShiLtJ_T0046646.1 MGP_NODShiLtJ_G0023364.1 mouse_genomes_project 17 35604527 35610228 + Tapbp protein_coding processed_transcript MGP_NODShiLtJ_T0046647.1 MGP_NODShiLtJ_G0023364.1 mouse_genomes_project 17 35610148 35612308 + Tapbp protein_coding retained_intron MGP_NODShiLtJ_T0013168.1 MGP_NODShiLtJ_G0011276.1 mouse_genomes_project 17 81025244 81026185 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003712.1 MGP_NODShiLtJ_G0003335.1 mouse_genomes_project 17 48803161 48804342 + Runx2os3 antisense antisense MGP_NODShiLtJ_T0048326.1 MGP_NODShiLtJ_G0023870.1 mouse_genomes_project 17 88822474 88844663 - MGP_NODShiLtJ_P0048326 Cdc42ep3 protein_coding protein_coding MGP_NODShiLtJ_T0046997.1 MGP_NODShiLtJ_G0023435.1 mouse_genomes_project 17 36992571 36995629 - MGP_NODShiLtJ_P0046997 Ly6g6d protein_coding protein_coding MGP_NODShiLtJ_T0046998.1 MGP_NODShiLtJ_G0023435.1 mouse_genomes_project 17 36992605 37000319 - Ly6g6d protein_coding processed_transcript MGP_NODShiLtJ_T0046999.1 MGP_NODShiLtJ_G0023435.1 mouse_genomes_project 17 36992673 36995593 - Ly6g6d protein_coding retained_intron MGP_NODShiLtJ_T0047000.1 MGP_NODShiLtJ_G0023435.1 mouse_genomes_project 17 36995043 37000319 - Ly6g6d protein_coding retained_intron MGP_NODShiLtJ_T0047001.1 MGP_NODShiLtJ_G0023435.1 mouse_genomes_project 17 36995341 37000310 - Ly6g6d protein_coding processed_transcript MGP_NODShiLtJ_T0045205.1 MGP_NODShiLtJ_G0022963.1 mouse_genomes_project 17 6736834 6766674 + MGP_NODShiLtJ_P0045205 1700010I14Rik protein_coding protein_coding MGP_NODShiLtJ_T0045206.1 MGP_NODShiLtJ_G0022963.1 mouse_genomes_project 17 6736858 6766673 + MGP_NODShiLtJ_P0045206 1700010I14Rik protein_coding protein_coding MGP_NODShiLtJ_T0045207.1 MGP_NODShiLtJ_G0022963.1 mouse_genomes_project 17 6736884 6763573 + 1700010I14Rik protein_coding processed_transcript MGP_NODShiLtJ_T0006879.1 MGP_NODShiLtJ_G0005657.1 mouse_genomes_project 17 35966512 35967815 + Gm20506 lincRNA lincRNA MGP_NODShiLtJ_T0045129.1 MGP_NODShiLtJ_G0022938.1 mouse_genomes_project 17 3352741 3392725 - MGP_NODShiLtJ_P0045129 Serac1 protein_coding protein_coding MGP_NODShiLtJ_T0045130.1 MGP_NODShiLtJ_G0022938.1 mouse_genomes_project 17 3354449 3360616 - Serac1 protein_coding processed_transcript MGP_NODShiLtJ_T0045131.1 MGP_NODShiLtJ_G0022938.1 mouse_genomes_project 17 3354611 3392711 - MGP_NODShiLtJ_P0045131 Serac1 protein_coding protein_coding MGP_NODShiLtJ_T0045132.1 MGP_NODShiLtJ_G0022938.1 mouse_genomes_project 17 3360587 3361949 - Serac1 protein_coding retained_intron MGP_NODShiLtJ_T0045133.1 MGP_NODShiLtJ_G0022938.1 mouse_genomes_project 17 3377944 3392717 - Serac1 protein_coding processed_transcript MGP_NODShiLtJ_T0045654.1 MGP_NODShiLtJ_G0023126.1 mouse_genomes_project 17 25145480 25195543 + MGP_NODShiLtJ_P0045654 Pkd1 protein_coding protein_coding MGP_NODShiLtJ_T0045655.1 MGP_NODShiLtJ_G0023126.1 mouse_genomes_project 17 25145795 25195518 + MGP_NODShiLtJ_P0045655 Pkd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047659.1 MGP_NODShiLtJ_G0023644.1 mouse_genomes_project 17 51002568 51011778 - MGP_NODShiLtJ_P0047659 Srf protein_coding protein_coding MGP_NODShiLtJ_T0097973.1 MGP_NODShiLtJ_G0036385.1 mouse_genomes_project 17 51814741 51814814 + Gm26216 rRNA rRNA MGP_NODShiLtJ_T0045310.1 MGP_NODShiLtJ_G0022996.1 mouse_genomes_project 17 13457977 13472175 + MGP_NODShiLtJ_P0045310 Ermard protein_coding protein_coding MGP_NODShiLtJ_T0045311.1 MGP_NODShiLtJ_G0022996.1 mouse_genomes_project 17 13458007 13481869 + MGP_NODShiLtJ_P0045311 Ermard protein_coding protein_coding MGP_NODShiLtJ_T0045312.1 MGP_NODShiLtJ_G0022996.1 mouse_genomes_project 17 13458007 13470803 + MGP_NODShiLtJ_P0045312 Ermard protein_coding protein_coding MGP_NODShiLtJ_T0045313.1 MGP_NODShiLtJ_G0022996.1 mouse_genomes_project 17 13474288 13481403 + MGP_NODShiLtJ_P0045313 Ermard protein_coding protein_coding MGP_NODShiLtJ_T0099000.1 MGP_NODShiLtJ_G0037394.1 mouse_genomes_project 17 47603725 47603868 + Gm25135 snRNA snRNA MGP_NODShiLtJ_T0047720.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058227 52165561 + MGP_NODShiLtJ_P0047720 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0047721.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058255 52164956 + MGP_NODShiLtJ_P0047721 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0047722.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058332 52166112 + MGP_NODShiLtJ_P0047722 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0047723.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058338 52143042 + Ccnd3 protein_coding retained_intron MGP_NODShiLtJ_T0047724.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058395 52143442 + Ccnd3 protein_coding retained_intron MGP_NODShiLtJ_T0047725.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058407 52161493 + MGP_NODShiLtJ_P0047725 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0047726.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058416 52143214 + Ccnd3 protein_coding retained_intron MGP_NODShiLtJ_T0047727.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058417 52061211 + Ccnd3 protein_coding retained_intron MGP_NODShiLtJ_T0047728.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52058417 52166134 + MGP_NODShiLtJ_P0047728 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0047729.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52161144 52165665 + Ccnd3 protein_coding retained_intron MGP_NODShiLtJ_T0047730.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52161237 52165070 + MGP_NODShiLtJ_P0047730 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0047731.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52161363 52167182 + MGP_NODShiLtJ_P0047731 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0047732.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52162021 52164986 + MGP_NODShiLtJ_P0047732 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0047733.1 MGP_NODShiLtJ_G0023671.1 mouse_genomes_project 17 52162464 52166348 + MGP_NODShiLtJ_P0047733 Ccnd3 protein_coding protein_coding MGP_NODShiLtJ_T0046172.1 MGP_NODShiLtJ_G0023252.1 mouse_genomes_project 17 29153566 29179939 + MGP_NODShiLtJ_P0046172 Def6 protein_coding protein_coding MGP_NODShiLtJ_T0046173.1 MGP_NODShiLtJ_G0023252.1 mouse_genomes_project 17 29153625 29159508 + Def6 protein_coding processed_transcript MGP_NODShiLtJ_T0000968.1 MGP_NODShiLtJ_G0000894.1 mouse_genomes_project 17 56888850 56892025 - TEC TEC MGP_NODShiLtJ_T0013115.1 MGP_NODShiLtJ_G0011223.1 mouse_genomes_project 17 36125378 36125667 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006909.1 MGP_NODShiLtJ_G0005678.1 mouse_genomes_project 17 66403649 66629206 - lincRNA lincRNA MGP_NODShiLtJ_T0010125.1 MGP_NODShiLtJ_G0008258.1 mouse_genomes_project 17 71959072 71959174 + Mir6420 miRNA miRNA MGP_NODShiLtJ_T0045704.1 MGP_NODShiLtJ_G0023146.1 mouse_genomes_project 17 25504694 25508440 - MGP_NODShiLtJ_P0045704 Nubp2 protein_coding protein_coding MGP_NODShiLtJ_T0046757.1 MGP_NODShiLtJ_G0023385.1 mouse_genomes_project 17 35923316 35926456 + MGP_NODShiLtJ_P0046757 Psmb8 protein_coding protein_coding MGP_NODShiLtJ_T0046758.1 MGP_NODShiLtJ_G0023385.1 mouse_genomes_project 17 35923385 35926992 + MGP_NODShiLtJ_P0046758 Psmb8 protein_coding protein_coding MGP_NODShiLtJ_T0046759.1 MGP_NODShiLtJ_G0023385.1 mouse_genomes_project 17 35924201 35926962 + Psmb8 protein_coding retained_intron MGP_NODShiLtJ_T0047376.1 MGP_NODShiLtJ_G0023535.1 mouse_genomes_project 17 39689027 39689969 - MGP_NODShiLtJ_P0047376 Olfr103 protein_coding protein_coding MGP_NODShiLtJ_T0047377.1 MGP_NODShiLtJ_G0023535.1 mouse_genomes_project 17 39689027 39706337 - MGP_NODShiLtJ_P0047377 Olfr103 protein_coding protein_coding MGP_NODShiLtJ_T0045901.1 MGP_NODShiLtJ_G0023193.1 mouse_genomes_project 17 26508889 26511718 - MGP_NODShiLtJ_P0045901 Rhbdl1 protein_coding protein_coding MGP_NODShiLtJ_T0045902.1 MGP_NODShiLtJ_G0023193.1 mouse_genomes_project 17 26509026 26511505 - MGP_NODShiLtJ_P0045902 Rhbdl1 protein_coding protein_coding MGP_NODShiLtJ_T0045903.1 MGP_NODShiLtJ_G0023193.1 mouse_genomes_project 17 26510195 26511674 - MGP_NODShiLtJ_P0045903 Rhbdl1 protein_coding protein_coding MGP_NODShiLtJ_T0047474.1 MGP_NODShiLtJ_G0023604.1 mouse_genomes_project 17 47983748 48238805 + MGP_NODShiLtJ_P0047474 Rcan2 protein_coding protein_coding MGP_NODShiLtJ_T0047475.1 MGP_NODShiLtJ_G0023604.1 mouse_genomes_project 17 48146033 48236698 + MGP_NODShiLtJ_P0047475 Rcan2 protein_coding protein_coding MGP_NODShiLtJ_T0047476.1 MGP_NODShiLtJ_G0023604.1 mouse_genomes_project 17 48146207 48238805 + MGP_NODShiLtJ_P0047476 Rcan2 protein_coding protein_coding MGP_NODShiLtJ_T0046456.1 MGP_NODShiLtJ_G0023317.1 mouse_genomes_project 17 33634303 33643883 - MGP_NODShiLtJ_P0046456 Brd4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046457.1 MGP_NODShiLtJ_G0023317.1 mouse_genomes_project 17 33635557 33731181 - MGP_NODShiLtJ_P0046457 Brd4 protein_coding protein_coding MGP_NODShiLtJ_T0046458.1 MGP_NODShiLtJ_G0023317.1 mouse_genomes_project 17 33635557 33731174 - MGP_NODShiLtJ_P0046458 Brd4 protein_coding protein_coding MGP_NODShiLtJ_T0046459.1 MGP_NODShiLtJ_G0023317.1 mouse_genomes_project 17 33635559 33731174 - MGP_NODShiLtJ_P0046459 Brd4 protein_coding protein_coding MGP_NODShiLtJ_T0046460.1 MGP_NODShiLtJ_G0023317.1 mouse_genomes_project 17 33644189 33731181 - MGP_NODShiLtJ_P0046460 Brd4 protein_coding protein_coding MGP_NODShiLtJ_T0046461.1 MGP_NODShiLtJ_G0023317.1 mouse_genomes_project 17 33645946 33731194 - MGP_NODShiLtJ_P0046461 Brd4 protein_coding protein_coding MGP_NODShiLtJ_T0046462.1 MGP_NODShiLtJ_G0023317.1 mouse_genomes_project 17 33652542 33731724 - MGP_NODShiLtJ_P0046462 Brd4 protein_coding protein_coding MGP_NODShiLtJ_T0046463.1 MGP_NODShiLtJ_G0023317.1 mouse_genomes_project 17 33652577 33731679 - MGP_NODShiLtJ_P0046463 Brd4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0101294.1 MGP_NODShiLtJ_G0039560.1 mouse_genomes_project 17 33477447 33495101 - transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101295.1 MGP_NODShiLtJ_G0039560.1 mouse_genomes_project 17 33477866 33526886 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0047712.1 MGP_NODShiLtJ_G0023667.1 mouse_genomes_project 17 51935860 51941850 - MGP_NODShiLtJ_P0047712 Guca1a protein_coding protein_coding MGP_NODShiLtJ_T0045560.1 MGP_NODShiLtJ_G0023108.1 mouse_genomes_project 17 24699186 24708087 - Amdhd2 protein_coding retained_intron MGP_NODShiLtJ_T0045561.1 MGP_NODShiLtJ_G0023108.1 mouse_genomes_project 17 24699186 24700093 - Amdhd2 protein_coding processed_transcript MGP_NODShiLtJ_T0045562.1 MGP_NODShiLtJ_G0023108.1 mouse_genomes_project 17 24699186 24708123 - MGP_NODShiLtJ_P0045562 Amdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0045563.1 MGP_NODShiLtJ_G0023108.1 mouse_genomes_project 17 24699188 24700946 - MGP_NODShiLtJ_P0045563 Amdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0045564.1 MGP_NODShiLtJ_G0023108.1 mouse_genomes_project 17 24701695 24707667 - MGP_NODShiLtJ_P0045564 Amdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0045565.1 MGP_NODShiLtJ_G0023108.1 mouse_genomes_project 17 24706568 24708050 - Amdhd2 protein_coding retained_intron MGP_NODShiLtJ_T0006929.1 MGP_NODShiLtJ_G0005693.1 mouse_genomes_project 17 97606047 97612559 - 4833418N02Rik lincRNA lincRNA MGP_NODShiLtJ_T0006930.1 MGP_NODShiLtJ_G0005693.1 mouse_genomes_project 17 97606082 97613681 - 4833418N02Rik lincRNA lincRNA MGP_NODShiLtJ_T0006931.1 MGP_NODShiLtJ_G0005693.1 mouse_genomes_project 17 97606409 97613367 - 4833418N02Rik lincRNA lincRNA MGP_NODShiLtJ_T0006932.1 MGP_NODShiLtJ_G0005693.1 mouse_genomes_project 17 97611131 97613646 - 4833418N02Rik lincRNA lincRNA MGP_NODShiLtJ_T0099001.1 MGP_NODShiLtJ_G0037395.1 mouse_genomes_project 17 49954041 49954122 + Gm25008 snRNA snRNA MGP_NODShiLtJ_T0045780.1 MGP_NODShiLtJ_G0023159.1 mouse_genomes_project 17 25790200 25799594 + MGP_NODShiLtJ_P0045780 Ccdc154 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045781.1 MGP_NODShiLtJ_G0023159.1 mouse_genomes_project 17 25790200 25799594 + MGP_NODShiLtJ_P0045781 Ccdc154 protein_coding protein_coding MGP_NODShiLtJ_T0045782.1 MGP_NODShiLtJ_G0023159.1 mouse_genomes_project 17 25790203 25799592 + MGP_NODShiLtJ_P0045782 Ccdc154 protein_coding protein_coding MGP_NODShiLtJ_T0045783.1 MGP_NODShiLtJ_G0023159.1 mouse_genomes_project 17 25790581 25799563 + MGP_NODShiLtJ_P0045783 Ccdc154 protein_coding protein_coding MGP_NODShiLtJ_T0047309.1 MGP_NODShiLtJ_G0023510.1 mouse_genomes_project 17 39142310 39150746 - MGP_NODShiLtJ_P0047309 Trim40 protein_coding protein_coding MGP_NODShiLtJ_T0047310.1 MGP_NODShiLtJ_G0023510.1 mouse_genomes_project 17 39142557 39150228 - MGP_NODShiLtJ_P0047310 Trim40 protein_coding protein_coding MGP_NODShiLtJ_T0047311.1 MGP_NODShiLtJ_G0023510.1 mouse_genomes_project 17 39143662 39150824 - Trim40 protein_coding retained_intron MGP_NODShiLtJ_T0047312.1 MGP_NODShiLtJ_G0023510.1 mouse_genomes_project 17 39149959 39150813 - Trim40 protein_coding processed_transcript MGP_NODShiLtJ_T0000962.1 MGP_NODShiLtJ_G0000888.1 mouse_genomes_project 17 32878388 32881494 - TEC TEC MGP_NODShiLtJ_T0013182.1 MGP_NODShiLtJ_G0011290.1 mouse_genomes_project 17 101572375 101573616 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0047378.1 MGP_NODShiLtJ_G0023536.1 mouse_genomes_project 17 39795168 39797496 + MGP_NODShiLtJ_P0047378 Olfr107 protein_coding protein_coding MGP_NODShiLtJ_T0013170.1 MGP_NODShiLtJ_G0011278.1 mouse_genomes_project 17 81561262 81561932 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101081.1 MGP_NODShiLtJ_G0039437.1 mouse_genomes_project 17 59054230 59057994 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0017435.1 MGP_NODShiLtJ_G0015221.1 mouse_genomes_project 17 39575904 39577913 + processed_transcript retained_intron MGP_NODShiLtJ_T0046794.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36374962 36401810 + MGP_NODShiLtJ_P0046794 Notch4 protein_coding protein_coding MGP_NODShiLtJ_T0046795.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36374992 36376311 + Notch4 protein_coding processed_transcript MGP_NODShiLtJ_T0046796.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36375031 36401538 + MGP_NODShiLtJ_P0046796 Notch4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046797.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36375830 36376272 + Notch4 protein_coding retained_intron MGP_NODShiLtJ_T0046798.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36390135 36395795 + Notch4 protein_coding processed_transcript MGP_NODShiLtJ_T0046799.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36397194 36399929 + MGP_NODShiLtJ_P0046799 Notch4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046800.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36397194 36399981 + MGP_NODShiLtJ_P0046800 Notch4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046801.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36397885 36398959 + Notch4 protein_coding retained_intron MGP_NODShiLtJ_T0046802.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36398971 36399930 + Notch4 protein_coding retained_intron MGP_NODShiLtJ_T0046803.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36399581 36400780 + Notch4 protein_coding retained_intron MGP_NODShiLtJ_T0046804.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36400251 36400808 + Notch4 protein_coding processed_transcript MGP_NODShiLtJ_T0046805.1 MGP_NODShiLtJ_G0023398.1 mouse_genomes_project 17 36400347 36401125 + Notch4 protein_coding processed_transcript MGP_NODShiLtJ_T0046286.1 MGP_NODShiLtJ_G0023273.1 mouse_genomes_project 17 30120694 30131318 + protein_coding retained_intron MGP_NODShiLtJ_T0046287.1 MGP_NODShiLtJ_G0023273.1 mouse_genomes_project 17 30120694 30132916 + MGP_NODShiLtJ_P0046287 protein_coding protein_coding MGP_NODShiLtJ_T0046288.1 MGP_NODShiLtJ_G0023273.1 mouse_genomes_project 17 30124346 30128114 + protein_coding retained_intron MGP_NODShiLtJ_T0046544.1 MGP_NODShiLtJ_G0023346.1 mouse_genomes_project 17 34938465 34969629 - MGP_NODShiLtJ_P0046544 Zfp81 protein_coding protein_coding MGP_NODShiLtJ_T0003698.1 MGP_NODShiLtJ_G0003324.1 mouse_genomes_project 17 37045822 37049522 - Gm20522 antisense antisense MGP_NODShiLtJ_T0013093.1 MGP_NODShiLtJ_G0011201.1 mouse_genomes_project 17 12194225 12195409 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048452.1 MGP_NODShiLtJ_G0023924.1 mouse_genomes_project 17 97772511 97793564 - protein_coding retained_intron MGP_NODShiLtJ_T0048453.1 MGP_NODShiLtJ_G0023924.1 mouse_genomes_project 17 97774245 97793565 - protein_coding retained_intron MGP_NODShiLtJ_T0048454.1 MGP_NODShiLtJ_G0023924.1 mouse_genomes_project 17 97780361 97793511 - MGP_NODShiLtJ_P0048454 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045306.1 MGP_NODShiLtJ_G0022994.1 mouse_genomes_project 17 13440398 13457926 - MGP_NODShiLtJ_P0045306 protein_coding protein_coding MGP_NODShiLtJ_T0045307.1 MGP_NODShiLtJ_G0022994.1 mouse_genomes_project 17 13440402 13457904 - MGP_NODShiLtJ_P0045307 protein_coding protein_coding MGP_NODShiLtJ_T0048358.1 MGP_NODShiLtJ_G0023889.1 mouse_genomes_project 17 90682796 90723800 - MGP_NODShiLtJ_P0048358 Thumpd2 protein_coding protein_coding MGP_NODShiLtJ_T0006892.1 MGP_NODShiLtJ_G0005668.1 mouse_genomes_project 17 49731006 49740333 + B230354K17Rik lincRNA lincRNA MGP_NODShiLtJ_T0097976.1 MGP_NODShiLtJ_G0036388.1 mouse_genomes_project 17 79701794 79701902 - Gm23115 rRNA rRNA MGP_NODShiLtJ_T0013131.1 MGP_NODShiLtJ_G0011239.1 mouse_genomes_project 17 39470389 39470986 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000970.1 MGP_NODShiLtJ_G0000896.1 mouse_genomes_project 17 56936318 56939571 + TEC TEC MGP_NODShiLtJ_T0013142.1 MGP_NODShiLtJ_G0011250.1 mouse_genomes_project 17 45089780 45090781 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0046289.1 MGP_NODShiLtJ_G0023274.1 mouse_genomes_project 17 30190552 30201026 + MGP_NODShiLtJ_P0046289 Cdkn1a protein_coding protein_coding MGP_NODShiLtJ_T0046290.1 MGP_NODShiLtJ_G0023274.1 mouse_genomes_project 17 30193345 30202221 + MGP_NODShiLtJ_P0046290 Cdkn1a protein_coding protein_coding MGP_NODShiLtJ_T0046291.1 MGP_NODShiLtJ_G0023274.1 mouse_genomes_project 17 30199721 30201068 + MGP_NODShiLtJ_P0046291 Cdkn1a protein_coding protein_coding MGP_NODShiLtJ_T0046419.1 MGP_NODShiLtJ_G0023308.1 mouse_genomes_project 17 32939147 32970941 + MGP_NODShiLtJ_P0046419 Pknox1 protein_coding protein_coding MGP_NODShiLtJ_T0046420.1 MGP_NODShiLtJ_G0023308.1 mouse_genomes_project 17 32940895 32973144 + MGP_NODShiLtJ_P0046420 Pknox1 protein_coding protein_coding MGP_NODShiLtJ_T0046421.1 MGP_NODShiLtJ_G0023308.1 mouse_genomes_project 17 32941039 32973140 + MGP_NODShiLtJ_P0046421 Pknox1 protein_coding protein_coding MGP_NODShiLtJ_T0046422.1 MGP_NODShiLtJ_G0023308.1 mouse_genomes_project 17 32950160 32950587 + Pknox1 protein_coding processed_transcript MGP_NODShiLtJ_T0046423.1 MGP_NODShiLtJ_G0023308.1 mouse_genomes_project 17 32953189 32957970 + Pknox1 protein_coding retained_intron MGP_NODShiLtJ_T0046424.1 MGP_NODShiLtJ_G0023308.1 mouse_genomes_project 17 32968197 32969044 + Pknox1 protein_coding retained_intron MGP_NODShiLtJ_T0006840.1 MGP_NODShiLtJ_G0005626.1 mouse_genomes_project 17 13807922 13813704 + A930024N18Rik lincRNA lincRNA MGP_NODShiLtJ_T0013147.1 MGP_NODShiLtJ_G0011255.1 mouse_genomes_project 17 58566505 58567135 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048218.1 MGP_NODShiLtJ_G0023830.1 mouse_genomes_project 17 79691223 79724727 - MGP_NODShiLtJ_P0048218 Ndc80 protein_coding protein_coding MGP_NODShiLtJ_T0046292.1 MGP_NODShiLtJ_G0023275.1 mouse_genomes_project 17 30242190 30255596 + MGP_NODShiLtJ_P0046292 Rab44 protein_coding protein_coding MGP_NODShiLtJ_T0046293.1 MGP_NODShiLtJ_G0023275.1 mouse_genomes_project 17 30243473 30254859 + Rab44 protein_coding processed_transcript MGP_NODShiLtJ_T0097779.1 MGP_NODShiLtJ_G0036191.1 mouse_genomes_project 17 39991741 39992705 - pseudogene pseudogene MGP_NODShiLtJ_T0101693.1 MGP_NODShiLtJ_G0039862.1 mouse_genomes_project 17 19477684 19522265 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010092.1 MGP_NODShiLtJ_G0008225.1 mouse_genomes_project 17 27925292 27925359 + Mir7677 miRNA miRNA MGP_NODShiLtJ_T0047390.1 MGP_NODShiLtJ_G0023545.1 mouse_genomes_project 17 40004785 40005785 - MGP_NODShiLtJ_P0047390 Olfr114 protein_coding protein_coding MGP_NODShiLtJ_T0047673.1 MGP_NODShiLtJ_G0023649.1 mouse_genomes_project 17 51133461 51141810 - MGP_NODShiLtJ_P0047673 Rrp36 protein_coding protein_coding MGP_NODShiLtJ_T0013082.1 MGP_NODShiLtJ_G0011190.1 mouse_genomes_project 17 3104055 3104539 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045145.1 MGP_NODShiLtJ_G0022942.1 mouse_genomes_project 17 3788451 3794546 + MGP_NODShiLtJ_P0045145 protein_coding protein_coding MGP_NODShiLtJ_T0006839.1 MGP_NODShiLtJ_G0005625.1 mouse_genomes_project 17 13656668 13665875 - Gm5091 lincRNA lincRNA MGP_NODShiLtJ_T0048342.1 MGP_NODShiLtJ_G0023878.1 mouse_genomes_project 17 89780354 89793640 + MGP_NODShiLtJ_P0048342 Ttc39d protein_coding protein_coding MGP_NODShiLtJ_T0048343.1 MGP_NODShiLtJ_G0023878.1 mouse_genomes_project 17 89791617 89793639 + MGP_NODShiLtJ_P0048343 Ttc39d protein_coding protein_coding MGP_NODShiLtJ_T0048312.1 MGP_NODShiLtJ_G0023865.1 mouse_genomes_project 17 88391349 88395174 + MGP_NODShiLtJ_P0048312 Cebpzos protein_coding protein_coding MGP_NODShiLtJ_T0048313.1 MGP_NODShiLtJ_G0023865.1 mouse_genomes_project 17 88391366 88395174 + MGP_NODShiLtJ_P0048313 Cebpzos protein_coding protein_coding MGP_NODShiLtJ_T0048314.1 MGP_NODShiLtJ_G0023865.1 mouse_genomes_project 17 88391549 88393306 + MGP_NODShiLtJ_P0048314 Cebpzos protein_coding protein_coding MGP_NODShiLtJ_T0101683.1 MGP_NODShiLtJ_G0039852.1 mouse_genomes_project 17 17091111 18435117 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0046138.1 MGP_NODShiLtJ_G0023244.1 mouse_genomes_project 17 28663254 28737395 - MGP_NODShiLtJ_P0046138 D17Wsu92e protein_coding protein_coding MGP_NODShiLtJ_T0046139.1 MGP_NODShiLtJ_G0023244.1 mouse_genomes_project 17 28663268 28737328 - MGP_NODShiLtJ_P0046139 D17Wsu92e protein_coding protein_coding MGP_NODShiLtJ_T0046140.1 MGP_NODShiLtJ_G0023244.1 mouse_genomes_project 17 28679517 28737379 - MGP_NODShiLtJ_P0046140 D17Wsu92e protein_coding protein_coding MGP_NODShiLtJ_T0047363.1 MGP_NODShiLtJ_G0023522.1 mouse_genomes_project 17 39366440 39367379 - MGP_NODShiLtJ_P0047363 Olfr91 protein_coding protein_coding MGP_NODShiLtJ_T0048414.1 MGP_NODShiLtJ_G0023912.1 mouse_genomes_project 17 96426634 96945655 + MGP_NODShiLtJ_P0048414 Prkce protein_coding protein_coding MGP_NODShiLtJ_T0048415.1 MGP_NODShiLtJ_G0023912.1 mouse_genomes_project 17 96426668 96436372 + MGP_NODShiLtJ_P0048415 Prkce protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048416.1 MGP_NODShiLtJ_G0023912.1 mouse_genomes_project 17 96427023 96943140 + MGP_NODShiLtJ_P0048416 Prkce protein_coding protein_coding MGP_NODShiLtJ_T0048417.1 MGP_NODShiLtJ_G0023912.1 mouse_genomes_project 17 96771108 96776780 + Prkce protein_coding retained_intron MGP_NODShiLtJ_T0048418.1 MGP_NODShiLtJ_G0023912.1 mouse_genomes_project 17 96773873 96777125 + Prkce protein_coding retained_intron MGP_NODShiLtJ_T0046501.1 MGP_NODShiLtJ_G0023328.1 mouse_genomes_project 17 34167141 34189228 + MGP_NODShiLtJ_P0046501 Cyp4f15 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046502.1 MGP_NODShiLtJ_G0023328.1 mouse_genomes_project 17 34167321 34189620 + MGP_NODShiLtJ_P0046502 Cyp4f15 protein_coding protein_coding MGP_NODShiLtJ_T0046503.1 MGP_NODShiLtJ_G0023328.1 mouse_genomes_project 17 34167362 34174595 + Cyp4f15 protein_coding retained_intron MGP_NODShiLtJ_T0046504.1 MGP_NODShiLtJ_G0023328.1 mouse_genomes_project 17 34167365 34184131 + Cyp4f15 protein_coding processed_transcript MGP_NODShiLtJ_T0046505.1 MGP_NODShiLtJ_G0023328.1 mouse_genomes_project 17 34167373 34189620 + MGP_NODShiLtJ_P0046505 Cyp4f15 protein_coding protein_coding MGP_NODShiLtJ_T0046249.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29853878 29895125 + MGP_NODShiLtJ_P0046249 Brpf3 protein_coding protein_coding MGP_NODShiLtJ_T0046250.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29854560 29860512 + Brpf3 protein_coding processed_transcript MGP_NODShiLtJ_T0046251.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29863573 29872332 + Brpf3 protein_coding processed_transcript MGP_NODShiLtJ_T0046252.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29864465 29895072 + Brpf3 protein_coding retained_intron MGP_NODShiLtJ_T0046253.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29869614 29872718 + Brpf3 protein_coding retained_intron MGP_NODShiLtJ_T0046254.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29869767 29872956 + Brpf3 protein_coding processed_transcript MGP_NODShiLtJ_T0046255.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29879230 29893291 + Brpf3 protein_coding processed_transcript MGP_NODShiLtJ_T0046256.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29880185 29893329 + Brpf3 protein_coding processed_transcript MGP_NODShiLtJ_T0046257.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29880265 29895120 + Brpf3 protein_coding processed_transcript MGP_NODShiLtJ_T0046258.1 MGP_NODShiLtJ_G0023267.1 mouse_genomes_project 17 29884673 29893384 + Brpf3 protein_coding processed_transcript MGP_NODShiLtJ_T0101745.1 MGP_NODShiLtJ_G0039913.1 mouse_genomes_project 17 38734692 38736543 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0011325.1 MGP_NODShiLtJ_G0009458.1 mouse_genomes_project 17 89766389 89766636 - Gm25706 misc_RNA misc_RNA MGP_NODShiLtJ_T0013095.1 MGP_NODShiLtJ_G0011203.1 mouse_genomes_project 17 14013445 14013703 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0098994.1 MGP_NODShiLtJ_G0037388.1 mouse_genomes_project 17 35354658 35354733 + Gm22943 snRNA snRNA MGP_NODShiLtJ_T0046577.1 MGP_NODShiLtJ_G0023353.1 mouse_genomes_project 17 35264541 35306079 - MGP_NODShiLtJ_P0046577 Hnrnpm protein_coding protein_coding MGP_NODShiLtJ_T0046578.1 MGP_NODShiLtJ_G0023353.1 mouse_genomes_project 17 35264543 35304610 - MGP_NODShiLtJ_P0046578 Hnrnpm protein_coding protein_coding MGP_NODShiLtJ_T0046579.1 MGP_NODShiLtJ_G0023353.1 mouse_genomes_project 17 35264544 35304606 - MGP_NODShiLtJ_P0046579 Hnrnpm protein_coding protein_coding MGP_NODShiLtJ_T0046580.1 MGP_NODShiLtJ_G0023353.1 mouse_genomes_project 17 35264547 35278528 - MGP_NODShiLtJ_P0046580 Hnrnpm protein_coding protein_coding MGP_NODShiLtJ_T0046581.1 MGP_NODShiLtJ_G0023353.1 mouse_genomes_project 17 35264547 35304606 - MGP_NODShiLtJ_P0046581 Hnrnpm protein_coding protein_coding MGP_NODShiLtJ_T0046582.1 MGP_NODShiLtJ_G0023353.1 mouse_genomes_project 17 35268566 35285767 - MGP_NODShiLtJ_P0046582 Hnrnpm protein_coding protein_coding MGP_NODShiLtJ_T0046583.1 MGP_NODShiLtJ_G0023353.1 mouse_genomes_project 17 35287832 35304603 - Hnrnpm protein_coding retained_intron MGP_NODShiLtJ_T0046584.1 MGP_NODShiLtJ_G0023353.1 mouse_genomes_project 17 35296147 35304619 - Hnrnpm protein_coding retained_intron MGP_NODShiLtJ_T0013185.1 MGP_NODShiLtJ_G0011293.1 mouse_genomes_project 17 106796319 106796494 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045464.1 MGP_NODShiLtJ_G0023075.1 mouse_genomes_project 17 24003653 24011112 - MGP_NODShiLtJ_P0045464 Zfp213 protein_coding protein_coding MGP_NODShiLtJ_T0003693.1 MGP_NODShiLtJ_G0003320.1 mouse_genomes_project 17 35801423 35812595 - BC051537 antisense antisense MGP_NODShiLtJ_T0048430.1 MGP_NODShiLtJ_G0023920.1 mouse_genomes_project 17 97427259 97457182 + MGP_NODShiLtJ_P0048430 Socs5 protein_coding protein_coding MGP_NODShiLtJ_T0047246.1 MGP_NODShiLtJ_G0023487.1 mouse_genomes_project 17 38083351 38088580 - H2-T23 protein_coding retained_intron MGP_NODShiLtJ_T0047247.1 MGP_NODShiLtJ_G0023487.1 mouse_genomes_project 17 38083354 38088708 - MGP_NODShiLtJ_P0047247 H2-T23 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0047248.1 MGP_NODShiLtJ_G0023487.1 mouse_genomes_project 17 38083554 38088894 - MGP_NODShiLtJ_P0047248 H2-T23 protein_coding protein_coding MGP_NODShiLtJ_T0047249.1 MGP_NODShiLtJ_G0023487.1 mouse_genomes_project 17 38083582 38088729 - H2-T23 protein_coding retained_intron MGP_NODShiLtJ_T0047250.1 MGP_NODShiLtJ_G0023487.1 mouse_genomes_project 17 38087797 38088769 - H2-T23 protein_coding retained_intron MGP_NODShiLtJ_T0006847.1 MGP_NODShiLtJ_G0005632.1 mouse_genomes_project 17 24003653 24005198 + Gm26695 lincRNA lincRNA MGP_NODShiLtJ_T0100246.1 MGP_NODShiLtJ_G0038640.1 mouse_genomes_project 17 25122800 25122878 + Snord60 snoRNA snoRNA MGP_NODShiLtJ_T0047368.1 MGP_NODShiLtJ_G0023527.1 mouse_genomes_project 17 39528581 39529555 - MGP_NODShiLtJ_P0047368 Olfr95 protein_coding protein_coding MGP_NODShiLtJ_T0013129.1 MGP_NODShiLtJ_G0011237.1 mouse_genomes_project 17 38890944 38891512 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0045967.1 MGP_NODShiLtJ_G0023203.1 mouse_genomes_project 17 26632230 26646221 + MGP_NODShiLtJ_P0045967 D630044L22Rik protein_coding protein_coding MGP_NODShiLtJ_T0046594.1 MGP_NODShiLtJ_G0023355.1 mouse_genomes_project 17 35361684 35385927 - MGP_NODShiLtJ_P0046594 Rab11b protein_coding protein_coding MGP_NODShiLtJ_T0046595.1 MGP_NODShiLtJ_G0023355.1 mouse_genomes_project 17 35368890 35385881 - Rab11b protein_coding processed_transcript MGP_NODShiLtJ_T0010091.1 MGP_NODShiLtJ_G0008224.1 mouse_genomes_project 17 27745347 27745411 - Mir3083 miRNA miRNA MGP_NODShiLtJ_T0045608.1 MGP_NODShiLtJ_G0023117.1 mouse_genomes_project 17 24998874 25013589 + MGP_NODShiLtJ_P0045608 Eci1 protein_coding protein_coding MGP_NODShiLtJ_T0000967.1 MGP_NODShiLtJ_G0000893.1 mouse_genomes_project 17 56883511 56885497 - TEC TEC MGP_NODShiLtJ_T0006898.1 MGP_NODShiLtJ_G0005673.1 mouse_genomes_project 17 53907011 53908264 - 1700008K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0006899.1 MGP_NODShiLtJ_G0005673.1 mouse_genomes_project 17 53907011 53908277 - 1700008K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0006900.1 MGP_NODShiLtJ_G0005673.1 mouse_genomes_project 17 53907013 53908185 - 1700008K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0006901.1 MGP_NODShiLtJ_G0005673.1 mouse_genomes_project 17 53907013 53908242 - 1700008K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0006902.1 MGP_NODShiLtJ_G0005673.1 mouse_genomes_project 17 53907121 53908284 - 1700008K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0011328.1 MGP_NODShiLtJ_G0009461.1 mouse_genomes_project 17 95809949 95810023 + Gm27610 misc_RNA misc_RNA MGP_NODShiLtJ_T0047545.1 MGP_NODShiLtJ_G0023620.1 mouse_genomes_project 17 49963353 49990557 - MGP_NODShiLtJ_P0047545 Capn11 protein_coding protein_coding MGP_NODShiLtJ_T0047546.1 MGP_NODShiLtJ_G0023620.1 mouse_genomes_project 17 49979428 49990529 - MGP_NODShiLtJ_P0047546 Capn11 protein_coding non_stop_decay MGP_NODShiLtJ_T0101690.1 MGP_NODShiLtJ_G0039859.1 mouse_genomes_project 17 18322517 18323832 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048327.1 MGP_NODShiLtJ_G0023871.1 mouse_genomes_project 17 89140377 89197172 + MGP_NODShiLtJ_P0048327 Rmdn2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013158.1 MGP_NODShiLtJ_G0011266.1 mouse_genomes_project 17 59284946 59285654 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0017443.1 MGP_NODShiLtJ_G0015224.1 mouse_genomes_project 17 79770034 79815937 - Trmt61b processed_transcript processed_transcript MGP_NODShiLtJ_T0017444.1 MGP_NODShiLtJ_G0015224.1 mouse_genomes_project 17 79770069 79815928 - Trmt61b processed_transcript processed_transcript MGP_NODShiLtJ_T0017445.1 MGP_NODShiLtJ_G0015224.1 mouse_genomes_project 17 79803622 79815432 - Trmt61b processed_transcript processed_transcript MGP_NODShiLtJ_T0047256.1 MGP_NODShiLtJ_G0023491.1 mouse_genomes_project 17 38133455 38137319 - MGP_NODShiLtJ_P0047256 H2-Q7 protein_coding protein_coding MGP_NODShiLtJ_T0011331.1 MGP_NODShiLtJ_G0009464.1 mouse_genomes_project 17 95813348 95813547 + Gm27502 misc_RNA misc_RNA MGP_NODShiLtJ_T0046604.1 MGP_NODShiLtJ_G0023358.1 mouse_genomes_project 17 35462752 35468205 - MGP_NODShiLtJ_P0046604 Rps28 protein_coding protein_coding MGP_NODShiLtJ_T0046607.1 MGP_NODShiLtJ_G0023358.1 mouse_genomes_project 17 35466752 35468275 - MGP_NODShiLtJ_P0046607 Rps28 protein_coding protein_coding MGP_NODShiLtJ_T0046608.1 MGP_NODShiLtJ_G0023358.1 mouse_genomes_project 17 35466753 35468059 - MGP_NODShiLtJ_P0046608 Rps28 protein_coding protein_coding MGP_NODShiLtJ_T0046609.1 MGP_NODShiLtJ_G0023358.1 mouse_genomes_project 17 35466766 35468178 - Rps28 protein_coding processed_transcript MGP_NODShiLtJ_T0046610.1 MGP_NODShiLtJ_G0023358.1 mouse_genomes_project 17 35466766 35468275 - MGP_NODShiLtJ_P0046610 Rps28 protein_coding protein_coding MGP_NODShiLtJ_T0046611.1 MGP_NODShiLtJ_G0023358.1 mouse_genomes_project 17 35466768 35468189 - MGP_NODShiLtJ_P0046611 Rps28 protein_coding protein_coding MGP_NODShiLtJ_T0046612.1 MGP_NODShiLtJ_G0023358.1 mouse_genomes_project 17 35467302 35468197 - Rps28 protein_coding retained_intron MGP_NODShiLtJ_T0101770.1 MGP_NODShiLtJ_G0039938.1 mouse_genomes_project 17 40945291 40947004 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0047173.1 MGP_NODShiLtJ_G0023477.1 mouse_genomes_project 17 37884259 37898323 + MGP_NODShiLtJ_P0047173 Ppp1r18 protein_coding protein_coding MGP_NODShiLtJ_T0047174.1 MGP_NODShiLtJ_G0023477.1 mouse_genomes_project 17 37884291 37898224 + MGP_NODShiLtJ_P0047174 Ppp1r18 protein_coding protein_coding MGP_NODShiLtJ_T0047175.1 MGP_NODShiLtJ_G0023477.1 mouse_genomes_project 17 37884722 37898328 + MGP_NODShiLtJ_P0047175 Ppp1r18 protein_coding protein_coding MGP_NODShiLtJ_T0047176.1 MGP_NODShiLtJ_G0023477.1 mouse_genomes_project 17 37885281 37898328 + MGP_NODShiLtJ_P0047176 Ppp1r18 protein_coding protein_coding MGP_NODShiLtJ_T0047177.1 MGP_NODShiLtJ_G0023477.1 mouse_genomes_project 17 37885326 37898319 + MGP_NODShiLtJ_P0047177 Ppp1r18 protein_coding protein_coding MGP_NODShiLtJ_T0047178.1 MGP_NODShiLtJ_G0023477.1 mouse_genomes_project 17 37887069 37898326 + MGP_NODShiLtJ_P0047178 Ppp1r18 protein_coding protein_coding MGP_NODShiLtJ_T0048519.1 MGP_NODShiLtJ_G0023939.1 mouse_genomes_project 17 104818277 104824341 + MGP_NODShiLtJ_P0048519 Adcyap1 protein_coding protein_coding MGP_NODShiLtJ_T0101303.1 MGP_NODShiLtJ_G0039564.1 mouse_genomes_project 17 106784103 106818088 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101304.1 MGP_NODShiLtJ_G0039564.1 mouse_genomes_project 17 106784115 106796638 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101305.1 MGP_NODShiLtJ_G0039564.1 mouse_genomes_project 17 106784141 106818091 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101306.1 MGP_NODShiLtJ_G0039564.1 mouse_genomes_project 17 106786498 106817985 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0045489.1 MGP_NODShiLtJ_G0023081.1 mouse_genomes_project 17 24143350 24144982 + MGP_NODShiLtJ_P0045489 Hcfc1r1 protein_coding protein_coding MGP_NODShiLtJ_T0045490.1 MGP_NODShiLtJ_G0023081.1 mouse_genomes_project 17 24143362 24144982 + MGP_NODShiLtJ_P0045490 Hcfc1r1 protein_coding protein_coding MGP_NODShiLtJ_T0045491.1 MGP_NODShiLtJ_G0023081.1 mouse_genomes_project 17 24143381 24144929 + MGP_NODShiLtJ_P0045491 Hcfc1r1 protein_coding protein_coding MGP_NODShiLtJ_T0045430.1 MGP_NODShiLtJ_G0023058.1 mouse_genomes_project 17 21802673 21805075 + Zfp229 protein_coding processed_transcript MGP_NODShiLtJ_T0045431.1 MGP_NODShiLtJ_G0023058.1 mouse_genomes_project 17 21802706 21803911 + Zfp229 protein_coding processed_transcript MGP_NODShiLtJ_T0045432.1 MGP_NODShiLtJ_G0023058.1 mouse_genomes_project 17 21802717 21820686 + MGP_NODShiLtJ_P0045432 Zfp229 protein_coding protein_coding MGP_NODShiLtJ_T0045433.1 MGP_NODShiLtJ_G0023058.1 mouse_genomes_project 17 21802717 21843957 + MGP_NODShiLtJ_P0045433 Zfp229 protein_coding protein_coding MGP_NODShiLtJ_T0045434.1 MGP_NODShiLtJ_G0023058.1 mouse_genomes_project 17 21804905 21820687 + MGP_NODShiLtJ_P0045434 Zfp229 protein_coding protein_coding MGP_NODShiLtJ_T0101296.1 MGP_NODShiLtJ_G0039561.1 mouse_genomes_project 17 35644744 35646401 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101297.1 MGP_NODShiLtJ_G0039561.1 mouse_genomes_project 17 35644907 35646784 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0047295.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39095682 39096398 + Trim26 protein_coding retained_intron MGP_NODShiLtJ_T0047296.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39095689 39115902 + Trim26 protein_coding retained_intron MGP_NODShiLtJ_T0047297.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39095689 39119248 + MGP_NODShiLtJ_P0047297 Trim26 protein_coding protein_coding MGP_NODShiLtJ_T0047298.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39095691 39119266 + MGP_NODShiLtJ_P0047298 Trim26 protein_coding protein_coding MGP_NODShiLtJ_T0047299.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39095694 39119248 + MGP_NODShiLtJ_P0047299 Trim26 protein_coding protein_coding MGP_NODShiLtJ_T0047300.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39095721 39112560 + MGP_NODShiLtJ_P0047300 Trim26 protein_coding protein_coding MGP_NODShiLtJ_T0047301.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39095732 39117498 + MGP_NODShiLtJ_P0047301 Trim26 protein_coding protein_coding MGP_NODShiLtJ_T0047302.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39095732 39119265 + MGP_NODShiLtJ_P0047302 Trim26 protein_coding protein_coding MGP_NODShiLtJ_T0047303.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39112372 39117807 + MGP_NODShiLtJ_P0047303 Trim26 protein_coding protein_coding MGP_NODShiLtJ_T0047304.1 MGP_NODShiLtJ_G0023507.1 mouse_genomes_project 17 39114503 39119266 + Trim26 protein_coding processed_transcript MGP_NODShiLtJ_T0045883.1 MGP_NODShiLtJ_G0023186.1 mouse_genomes_project 17 26462573 26464350 - MGP_NODShiLtJ_P0045883 Fam173a protein_coding protein_coding MGP_NODShiLtJ_T0046028.1 MGP_NODShiLtJ_G0023217.1 mouse_genomes_project 17 27016875 27017763 - MGP_NODShiLtJ_P0046028 protein_coding protein_coding MGP_NODShiLtJ_T0047063.1 MGP_NODShiLtJ_G0023449.1 mouse_genomes_project 17 37128779 37131920 + MGP_NODShiLtJ_P0047063 Ltb protein_coding protein_coding MGP_NODShiLtJ_T0047064.1 MGP_NODShiLtJ_G0023449.1 mouse_genomes_project 17 37128863 37131923 + Ltb protein_coding retained_intron MGP_NODShiLtJ_T0047065.1 MGP_NODShiLtJ_G0023449.1 mouse_genomes_project 17 37128966 37131938 + MGP_NODShiLtJ_P0047065 Ltb protein_coding protein_coding MGP_NODShiLtJ_T0097969.1 MGP_NODShiLtJ_G0036381.1 mouse_genomes_project 17 3465042 3465164 + n-R5s26 rRNA rRNA MGP_NODShiLtJ_T0047367.1 MGP_NODShiLtJ_G0023526.1 mouse_genomes_project 17 39509339 39510644 - MGP_NODShiLtJ_P0047367 Olfr94 protein_coding protein_coding MGP_NODShiLtJ_T0047925.1 MGP_NODShiLtJ_G0023730.1 mouse_genomes_project 17 61791741 61811633 - MGP_NODShiLtJ_P0047925 Sh3gl1 protein_coding protein_coding MGP_NODShiLtJ_T0045665.1 MGP_NODShiLtJ_G0023133.1 mouse_genomes_project 17 25301950 25304354 - MGP_NODShiLtJ_P0045665 Gfer protein_coding protein_coding MGP_NODShiLtJ_T0006834.1 MGP_NODShiLtJ_G0005621.1 mouse_genomes_project 17 8210741 8215493 + 1700110C19Rik lincRNA lincRNA MGP_NODShiLtJ_T0006835.1 MGP_NODShiLtJ_G0005621.1 mouse_genomes_project 17 8210741 8215493 + 1700110C19Rik lincRNA lincRNA MGP_NODShiLtJ_T0046760.1 MGP_NODShiLtJ_G0023386.1 mouse_genomes_project 17 35930251 35945269 + MGP_NODShiLtJ_P0046760 Tap2 protein_coding protein_coding MGP_NODShiLtJ_T0046761.1 MGP_NODShiLtJ_G0023386.1 mouse_genomes_project 17 35930804 35932068 + MGP_NODShiLtJ_P0046761 Tap2 protein_coding protein_coding MGP_NODShiLtJ_T0046762.1 MGP_NODShiLtJ_G0023386.1 mouse_genomes_project 17 35931266 35945266 + Tap2 protein_coding retained_intron MGP_NODShiLtJ_T0046763.1 MGP_NODShiLtJ_G0023386.1 mouse_genomes_project 17 35931799 35932267 + MGP_NODShiLtJ_P0046763 Tap2 protein_coding protein_coding MGP_NODShiLtJ_T0046764.1 MGP_NODShiLtJ_G0023386.1 mouse_genomes_project 17 35935569 35938035 + Tap2 protein_coding processed_transcript MGP_NODShiLtJ_T0045696.1 MGP_NODShiLtJ_G0023142.1 mouse_genomes_project 17 25423895 25459685 + MGP_NODShiLtJ_P0045696 Meiob protein_coding protein_coding MGP_NODShiLtJ_T0046508.1 MGP_NODShiLtJ_G0023330.1 mouse_genomes_project 17 34292696 34307893 - MGP_NODShiLtJ_P0046508 Zfp811 protein_coding protein_coding MGP_NODShiLtJ_T0046509.1 MGP_NODShiLtJ_G0023330.1 mouse_genomes_project 17 34294337 34297864 - MGP_NODShiLtJ_P0046509 Zfp811 protein_coding protein_coding MGP_NODShiLtJ_T0046827.1 MGP_NODShiLtJ_G0023402.1 mouse_genomes_project 17 36414431 36416803 - MGP_NODShiLtJ_P0046827 Rnf5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0046828.1 MGP_NODShiLtJ_G0023402.1 mouse_genomes_project 17 36414645 36416706 - Rnf5 protein_coding retained_intron MGP_NODShiLtJ_T0046829.1 MGP_NODShiLtJ_G0023402.1 mouse_genomes_project 17 36415113 36416991 - Rnf5 protein_coding retained_intron MGP_NODShiLtJ_T0011317.1 MGP_NODShiLtJ_G0009450.1 mouse_genomes_project 17 48156026 48156312 - Gm24532 misc_RNA misc_RNA MGP_NODShiLtJ_T0045380.1 MGP_NODShiLtJ_G0023017.1 mouse_genomes_project 17 17372467 17396863 + MGP_NODShiLtJ_P0045380 Vmn2r93 protein_coding protein_coding MGP_NODShiLtJ_T0098989.1 MGP_NODShiLtJ_G0037383.1 mouse_genomes_project 17 26359908 26360015 - Gm22645 snRNA snRNA MGP_NODShiLtJ_T0101694.1 MGP_NODShiLtJ_G0039863.1 mouse_genomes_project 17 19601332 19602235 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0048038.1 MGP_NODShiLtJ_G0023778.1 mouse_genomes_project 17 63028753 63032534 - MGP_NODShiLtJ_P0048038 Cd70 protein_coding protein_coding MGP_NODShiLtJ_T0048054.1 MGP_NODShiLtJ_G0023785.1 mouse_genomes_project 17 63398713 63441685 - MGP_NODShiLtJ_P0048054 Vmn2r120 protein_coding protein_coding MGP_NODShiLtJ_T0046777.1 MGP_NODShiLtJ_G0023391.1 mouse_genomes_project 17 36033941 36047880 + MGP_NODShiLtJ_P0046777 H2-Eb1 protein_coding protein_coding MGP_NODShiLtJ_T0047152.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37832945 37848548 + MGP_NODShiLtJ_P0047152 Flot1 protein_coding protein_coding MGP_NODShiLtJ_T0047153.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37832985 37848367 + MGP_NODShiLtJ_P0047153 Flot1 protein_coding protein_coding MGP_NODShiLtJ_T0047154.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37833020 37845774 + MGP_NODShiLtJ_P0047154 Flot1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047155.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37833064 37834040 + Flot1 protein_coding retained_intron MGP_NODShiLtJ_T0047156.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37833164 37835360 + MGP_NODShiLtJ_P0047156 Flot1 protein_coding protein_coding MGP_NODShiLtJ_T0047157.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37833187 37835372 + MGP_NODShiLtJ_P0047157 Flot1 protein_coding protein_coding MGP_NODShiLtJ_T0047158.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37833231 37835359 + MGP_NODShiLtJ_P0047158 Flot1 protein_coding protein_coding MGP_NODShiLtJ_T0047159.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37833637 37834545 + Flot1 protein_coding retained_intron MGP_NODShiLtJ_T0047160.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37845835 37848383 + Flot1 protein_coding retained_intron MGP_NODShiLtJ_T0047161.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37846246 37848397 + Flot1 protein_coding retained_intron MGP_NODShiLtJ_T0047162.1 MGP_NODShiLtJ_G0023473.1 mouse_genomes_project 17 37846385 37847217 + Flot1 protein_coding retained_intron MGP_NODShiLtJ_T0047422.1 MGP_NODShiLtJ_G0023573.1 mouse_genomes_project 17 42169365 42172967 - MGP_NODShiLtJ_P0047422 Esp23 protein_coding protein_coding MGP_NODShiLtJ_T0045387.1 MGP_NODShiLtJ_G0023024.1 mouse_genomes_project 17 19407402 19459565 + MGP_NODShiLtJ_P0045387 Vmn2r103 protein_coding protein_coding MGP_NODShiLtJ_T0013125.1 MGP_NODShiLtJ_G0011233.1 mouse_genomes_project 17 38442916 38443186 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006827.1 MGP_NODShiLtJ_G0005617.1 mouse_genomes_project 17 3080179 3086631 + 3300005D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006828.1 MGP_NODShiLtJ_G0005617.1 mouse_genomes_project 17 3080221 3086786 + 3300005D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006829.1 MGP_NODShiLtJ_G0005617.1 mouse_genomes_project 17 3081013 3086978 + 3300005D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006830.1 MGP_NODShiLtJ_G0005617.1 mouse_genomes_project 17 3081174 3086632 + 3300005D01Rik lincRNA lincRNA MGP_NODShiLtJ_T0003668.1 MGP_NODShiLtJ_G0003303.1 mouse_genomes_project 17 25122572 25123073 + Rab26os antisense antisense MGP_NODShiLtJ_T0003669.1 MGP_NODShiLtJ_G0003303.1 mouse_genomes_project 17 25122591 25123072 + Rab26os antisense antisense MGP_NODShiLtJ_T0048330.1 MGP_NODShiLtJ_G0023874.1 mouse_genomes_project 17 89379941 89429582 - MGP_NODShiLtJ_P0048330 Atl2 protein_coding protein_coding MGP_NODShiLtJ_T0048331.1 MGP_NODShiLtJ_G0023874.1 mouse_genomes_project 17 89382243 89429580 - MGP_NODShiLtJ_P0048331 Atl2 protein_coding protein_coding MGP_NODShiLtJ_T0045100.1 MGP_NODShiLtJ_G0022931.1 mouse_genomes_project 17 694751 772291 - MGP_NODShiLtJ_P0045100 Nox3 protein_coding protein_coding MGP_NODShiLtJ_T0048463.1 MGP_NODShiLtJ_G0023927.1 mouse_genomes_project 17 98154591 98204876 - MGP_NODShiLtJ_P0048463 Kcnk12 protein_coding protein_coding MGP_NODShiLtJ_T0046141.1 MGP_NODShiLtJ_G0023245.1 mouse_genomes_project 17 28760961 28775409 + protein_coding retained_intron MGP_NODShiLtJ_T0046142.1 MGP_NODShiLtJ_G0023245.1 mouse_genomes_project 17 28760989 28775340 + MGP_NODShiLtJ_P0046142 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010096.1 MGP_NODShiLtJ_G0008229.1 mouse_genomes_project 17 28225319 28225378 + Mir7218 miRNA miRNA MGP_NODShiLtJ_T0101703.1 MGP_NODShiLtJ_G0039872.1 mouse_genomes_project 17 21044446 21044978 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006853.1 MGP_NODShiLtJ_G0005636.1 mouse_genomes_project 17 26670247 26672902 + 1700022N22Rik lincRNA lincRNA MGP_NODShiLtJ_T0048308.1 MGP_NODShiLtJ_G0023864.1 mouse_genomes_project 17 88357121 88380615 - MGP_NODShiLtJ_P0048308 Sult6b1 protein_coding protein_coding MGP_NODShiLtJ_T0048309.1 MGP_NODShiLtJ_G0023864.1 mouse_genomes_project 17 88358072 88368072 - Sult6b1 protein_coding processed_transcript MGP_NODShiLtJ_T0048310.1 MGP_NODShiLtJ_G0023864.1 mouse_genomes_project 17 88358241 88380522 - MGP_NODShiLtJ_P0048310 Sult6b1 protein_coding protein_coding MGP_NODShiLtJ_T0048311.1 MGP_NODShiLtJ_G0023864.1 mouse_genomes_project 17 88358241 88380522 - MGP_NODShiLtJ_P0048311 Sult6b1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048100.1 MGP_NODShiLtJ_G0023803.1 mouse_genomes_project 17 73577430 73609095 - MGP_NODShiLtJ_P0048100 Twsg1 protein_coding protein_coding MGP_NODShiLtJ_T0000966.1 MGP_NODShiLtJ_G0000892.1 mouse_genomes_project 17 56857927 56862706 - TEC TEC MGP_NODShiLtJ_T0046705.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35747354 35754098 + MGP_NODShiLtJ_P0046705 Rxrb protein_coding protein_coding MGP_NODShiLtJ_T0046706.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35747725 35753405 + MGP_NODShiLtJ_P0046706 Rxrb protein_coding protein_coding MGP_NODShiLtJ_T0046707.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35747738 35749748 + MGP_NODShiLtJ_P0046707 Rxrb protein_coding protein_coding MGP_NODShiLtJ_T0046708.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35747917 35753520 + MGP_NODShiLtJ_P0046708 Rxrb protein_coding protein_coding MGP_NODShiLtJ_T0046709.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35747943 35754098 + MGP_NODShiLtJ_P0046709 Rxrb protein_coding protein_coding MGP_NODShiLtJ_T0046710.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35749095 35751716 + Rxrb protein_coding retained_intron MGP_NODShiLtJ_T0046711.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35749453 35752079 + Rxrb protein_coding retained_intron MGP_NODShiLtJ_T0046712.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35752028 35752979 + Rxrb protein_coding retained_intron MGP_NODShiLtJ_T0046713.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35752072 35753012 + Rxrb protein_coding retained_intron MGP_NODShiLtJ_T0046714.1 MGP_NODShiLtJ_G0023376.1 mouse_genomes_project 17 35752168 35753239 + Rxrb protein_coding retained_intron MGP_NODShiLtJ_T0045502.1 MGP_NODShiLtJ_G0023087.1 mouse_genomes_project 17 24205937 24211306 - MGP_NODShiLtJ_P0045502 Paqr4 protein_coding protein_coding MGP_NODShiLtJ_T0048045.1 MGP_NODShiLtJ_G0023782.1 mouse_genomes_project 17 63138411 63152585 + MGP_NODShiLtJ_P0048045 Trip10 protein_coding protein_coding MGP_NODShiLtJ_T0048046.1 MGP_NODShiLtJ_G0023782.1 mouse_genomes_project 17 63138508 63152036 + MGP_NODShiLtJ_P0048046 Trip10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045147.1 MGP_NODShiLtJ_G0022943.1 mouse_genomes_project 17 4156429 4165744 + MGP_NODShiLtJ_P0045147 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0045230.1 MGP_NODShiLtJ_G0022971.1 mouse_genomes_project 17 10459111 10549982 - MGP_NODShiLtJ_P0045230 Slc22a3 protein_coding protein_coding MGP_NODShiLtJ_T0100245.1 MGP_NODShiLtJ_G0038639.1 mouse_genomes_project 17 24558746 24558875 - Gm25092 snoRNA snoRNA MGP_NODShiLtJ_T0003703.1 MGP_NODShiLtJ_G0003329.1 mouse_genomes_project 17 37928357 37943732 + Gm16279 antisense antisense MGP_NODShiLtJ_T0047838.1 MGP_NODShiLtJ_G0023699.1 mouse_genomes_project 17 53204672 53219982 + MGP_NODShiLtJ_P0047838 Unc5cl protein_coding protein_coding MGP_NODShiLtJ_T0047839.1 MGP_NODShiLtJ_G0023699.1 mouse_genomes_project 17 53212127 53219976 + MGP_NODShiLtJ_P0047839 Unc5cl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047840.1 MGP_NODShiLtJ_G0023699.1 mouse_genomes_project 17 53212152 53310070 + MGP_NODShiLtJ_P0047840 Unc5cl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047841.1 MGP_NODShiLtJ_G0023699.1 mouse_genomes_project 17 53212158 53216329 + MGP_NODShiLtJ_P0047841 Unc5cl protein_coding protein_coding MGP_NODShiLtJ_T0047842.1 MGP_NODShiLtJ_G0023699.1 mouse_genomes_project 17 53212176 53219974 + MGP_NODShiLtJ_P0047842 Unc5cl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047843.1 MGP_NODShiLtJ_G0023699.1 mouse_genomes_project 17 53212196 53309963 + MGP_NODShiLtJ_P0047843 Unc5cl protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046936.1 MGP_NODShiLtJ_G0023421.1 mouse_genomes_project 17 36815928 36831852 + Slc44a4 protein_coding retained_intron MGP_NODShiLtJ_T0046937.1 MGP_NODShiLtJ_G0023421.1 mouse_genomes_project 17 36815932 36831829 + MGP_NODShiLtJ_P0046937 Slc44a4 protein_coding protein_coding MGP_NODShiLtJ_T0046938.1 MGP_NODShiLtJ_G0023421.1 mouse_genomes_project 17 36819182 36831913 + MGP_NODShiLtJ_P0046938 Slc44a4 protein_coding protein_coding MGP_NODShiLtJ_T0101711.1 MGP_NODShiLtJ_G0039880.1 mouse_genomes_project 17 23407171 23407750 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0045949.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26607326 26617953 - MGP_NODShiLtJ_P0045949 Pigq protein_coding protein_coding MGP_NODShiLtJ_T0045950.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26607327 26622674 - Pigq protein_coding retained_intron MGP_NODShiLtJ_T0045951.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26607327 26622726 - MGP_NODShiLtJ_P0045951 Pigq protein_coding protein_coding MGP_NODShiLtJ_T0045952.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26607327 26622839 - MGP_NODShiLtJ_P0045952 Pigq protein_coding protein_coding MGP_NODShiLtJ_T0045953.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26608395 26615592 - MGP_NODShiLtJ_P0045953 Pigq protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0045954.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26608502 26612114 - Pigq protein_coding retained_intron MGP_NODShiLtJ_T0045955.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26608544 26616852 - MGP_NODShiLtJ_P0045955 Pigq protein_coding protein_coding MGP_NODShiLtJ_T0045956.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26610769 26611854 - Pigq protein_coding retained_intron MGP_NODShiLtJ_T0045957.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26614786 26622726 - Pigq protein_coding retained_intron MGP_NODShiLtJ_T0045958.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26615869 26622724 - MGP_NODShiLtJ_P0045958 Pigq protein_coding protein_coding MGP_NODShiLtJ_T0045959.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26617265 26622720 - Pigq protein_coding retained_intron MGP_NODShiLtJ_T0045960.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26617871 26623653 - MGP_NODShiLtJ_P0045960 Pigq protein_coding protein_coding MGP_NODShiLtJ_T0045961.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26617925 26625301 - MGP_NODShiLtJ_P0045961 Pigq protein_coding protein_coding MGP_NODShiLtJ_T0045962.1 MGP_NODShiLtJ_G0023200.1 mouse_genomes_project 17 26618054 26623623 - MGP_NODShiLtJ_P0045962 Pigq protein_coding protein_coding MGP_NODShiLtJ_T0046625.1 MGP_NODShiLtJ_G0023361.1 mouse_genomes_project 17 35551273 35570476 - MGP_NODShiLtJ_P0046625 protein_coding protein_coding MGP_NODShiLtJ_T0046854.1 MGP_NODShiLtJ_G0023406.1 mouse_genomes_project 17 36445757 36449376 + MGP_NODShiLtJ_P0046854 Prrt1 protein_coding protein_coding MGP_NODShiLtJ_T0046855.1 MGP_NODShiLtJ_G0023406.1 mouse_genomes_project 17 36447628 36448647 + Prrt1 protein_coding retained_intron MGP_NODShiLtJ_T0003657.1 MGP_NODShiLtJ_G0003297.1 mouse_genomes_project 17 9048528 9055751 - Gm28505 antisense antisense MGP_NODShiLtJ_T0047385.1 MGP_NODShiLtJ_G0023542.1 mouse_genomes_project 17 39978947 39979938 - Olfr112 protein_coding processed_transcript MGP_NODShiLtJ_T0047386.1 MGP_NODShiLtJ_G0023542.1 mouse_genomes_project 17 39978958 39985005 - MGP_NODShiLtJ_P0047386 Olfr112 protein_coding protein_coding MGP_NODShiLtJ_T0047387.1 MGP_NODShiLtJ_G0023542.1 mouse_genomes_project 17 39979129 39984617 - MGP_NODShiLtJ_P0047387 Olfr112 protein_coding protein_coding MGP_NODShiLtJ_T0013178.1 MGP_NODShiLtJ_G0011286.1 mouse_genomes_project 17 95134697 95162964 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011702.1 MGP_NODShiLtJ_G0009825.1 mouse_genomes_project 17 38094180 38100856 - polymorphic_pseudogene retained_intron MGP_NODShiLtJ_T0047505.1 MGP_NODShiLtJ_G0023613.1 mouse_genomes_project 17 49842992 49866748 + MGP_NODShiLtJ_P0047505 Tcte1 protein_coding protein_coding MGP_NODShiLtJ_T0047401.1 MGP_NODShiLtJ_G0023556.1 mouse_genomes_project 17 40383259 40468085 + MGP_NODShiLtJ_P0047401 Olfr128 protein_coding protein_coding MGP_NODShiLtJ_T0046669.1 MGP_NODShiLtJ_G0023369.1 mouse_genomes_project 17 35633592 35635143 - MGP_NODShiLtJ_P0046669 B3galt4 protein_coding protein_coding MGP_NODShiLtJ_T0047370.1 MGP_NODShiLtJ_G0023529.1 mouse_genomes_project 17 39549952 39591454 - MGP_NODShiLtJ_P0047370 protein_coding protein_coding MGP_NODShiLtJ_T0006845.1 MGP_NODShiLtJ_G0005630.1 mouse_genomes_project 17 21555935 21563610 - 9330136K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0046526.1 MGP_NODShiLtJ_G0023335.1 mouse_genomes_project 17 34477150 34488736 + MGP_NODShiLtJ_P0046526 Zfp472 protein_coding protein_coding MGP_NODShiLtJ_T0006918.1 MGP_NODShiLtJ_G0005683.1 mouse_genomes_project 17 79013496 79015077 - Gm26510 lincRNA lincRNA MGP_NODShiLtJ_T0006919.1 MGP_NODShiLtJ_G0005683.1 mouse_genomes_project 17 79013499 79068193 - Gm26510 lincRNA lincRNA MGP_NODShiLtJ_T0047033.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37058698 37070826 + MGP_NODShiLtJ_P0047033 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047034.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37058698 37070843 + MGP_NODShiLtJ_P0047034 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047035.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37058725 37070827 + MGP_NODShiLtJ_P0047035 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047036.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37058748 37063830 + MGP_NODShiLtJ_P0047036 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047037.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37059006 37066116 + MGP_NODShiLtJ_P0047037 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047038.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37059030 37063893 + MGP_NODShiLtJ_P0047038 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047039.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37059238 37062226 + MGP_NODShiLtJ_P0047039 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047040.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37059250 37069870 + MGP_NODShiLtJ_P0047040 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047041.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37059264 37070841 + MGP_NODShiLtJ_P0047041 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047042.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37059643 37062486 + Bag6 protein_coding retained_intron MGP_NODShiLtJ_T0047043.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37062093 37063371 + Bag6 protein_coding retained_intron MGP_NODShiLtJ_T0047044.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37063751 37064914 + Bag6 protein_coding retained_intron MGP_NODShiLtJ_T0047045.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37064679 37065507 + Bag6 protein_coding retained_intron MGP_NODShiLtJ_T0047046.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37065497 37066123 + Bag6 protein_coding retained_intron MGP_NODShiLtJ_T0047047.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37069408 37070840 + MGP_NODShiLtJ_P0047047 Bag6 protein_coding protein_coding MGP_NODShiLtJ_T0047048.1 MGP_NODShiLtJ_G0023445.1 mouse_genomes_project 17 37069897 37070817 + Bag6 protein_coding retained_intron MGP_NODShiLtJ_T0047598.1 MGP_NODShiLtJ_G0023629.1 mouse_genomes_project 17 50586206 50624746 - MGP_NODShiLtJ_P0047598 Polh protein_coding protein_coding MGP_NODShiLtJ_T0046779.1 MGP_NODShiLtJ_G0023393.1 mouse_genomes_project 17 36088086 36104521 + MGP_NODShiLtJ_P0046779 Btnl2 protein_coding protein_coding MGP_NODShiLtJ_T0046780.1 MGP_NODShiLtJ_G0023393.1 mouse_genomes_project 17 36088086 36104520 + MGP_NODShiLtJ_P0046780 Btnl2 protein_coding protein_coding MGP_NODShiLtJ_T0101723.1 MGP_NODShiLtJ_G0039892.1 mouse_genomes_project 17 36323190 36323577 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0101758.1 MGP_NODShiLtJ_G0039926.1 mouse_genomes_project 17 39578418 39579811 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0006922.1 MGP_NODShiLtJ_G0005686.1 mouse_genomes_project 17 88355235 88365471 + Gm26637 lincRNA lincRNA MGP_NODShiLtJ_T0047170.1 MGP_NODShiLtJ_G0023476.1 mouse_genomes_project 17 37880001 37884069 + MGP_NODShiLtJ_P0047170 Nrm protein_coding protein_coding MGP_NODShiLtJ_T0047171.1 MGP_NODShiLtJ_G0023476.1 mouse_genomes_project 17 37880021 37883330 + MGP_NODShiLtJ_P0047171 Nrm protein_coding protein_coding MGP_NODShiLtJ_T0047172.1 MGP_NODShiLtJ_G0023476.1 mouse_genomes_project 17 37880169 37883270 + MGP_NODShiLtJ_P0047172 Nrm protein_coding protein_coding MGP_NODShiLtJ_T0006925.1 MGP_NODShiLtJ_G0005689.1 mouse_genomes_project 17 93924832 93927380 - C430042M11Rik lincRNA lincRNA MGP_NODShiLtJ_T0011320.1 MGP_NODShiLtJ_G0009453.1 mouse_genomes_project 17 53469110 53469368 - Gm23642 misc_RNA misc_RNA MGP_NODShiLtJ_T0045160.1 MGP_NODShiLtJ_G0022951.1 mouse_genomes_project 17 5571331 5581414 + MGP_NODShiLtJ_P0045160 protein_coding protein_coding MGP_NODShiLtJ_T0046510.1 MGP_NODShiLtJ_G0023331.1 mouse_genomes_project 17 34316619 34333038 - MGP_NODShiLtJ_P0046510 Zfp799 protein_coding protein_coding MGP_NODShiLtJ_T0046511.1 MGP_NODShiLtJ_G0023331.1 mouse_genomes_project 17 34316626 34323344 - MGP_NODShiLtJ_P0046511 Zfp799 protein_coding protein_coding MGP_NODShiLtJ_T0046512.1 MGP_NODShiLtJ_G0023331.1 mouse_genomes_project 17 34321967 34333005 - MGP_NODShiLtJ_P0046512 Zfp799 protein_coding protein_coding MGP_NODShiLtJ_T0046513.1 MGP_NODShiLtJ_G0023331.1 mouse_genomes_project 17 34322221 34333023 - MGP_NODShiLtJ_P0046513 Zfp799 protein_coding protein_coding MGP_NODShiLtJ_T0046514.1 MGP_NODShiLtJ_G0023331.1 mouse_genomes_project 17 34322585 34332992 - MGP_NODShiLtJ_P0046514 Zfp799 protein_coding protein_coding MGP_NODShiLtJ_T0047384.1 MGP_NODShiLtJ_G0023541.1 mouse_genomes_project 17 39880648 39881245 + MGP_NODShiLtJ_P0047384 protein_coding protein_coding MGP_NODShiLtJ_T0045966.1 MGP_NODShiLtJ_G0023202.1 mouse_genomes_project 17 26627159 26633324 - MGP_NODShiLtJ_P0045966 A930017K11Rik protein_coding protein_coding MGP_NODShiLtJ_T0046613.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35468303 35483672 + MGP_NODShiLtJ_P0046613 Ndufa7 protein_coding protein_coding MGP_NODShiLtJ_T0046614.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35468306 35469824 + Ndufa7 protein_coding retained_intron MGP_NODShiLtJ_T0046615.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35468316 35483665 + MGP_NODShiLtJ_P0046615 Ndufa7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0046616.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35468357 35469547 + Ndufa7 protein_coding retained_intron MGP_NODShiLtJ_T0046617.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35468745 35483538 + Ndufa7 protein_coding processed_transcript MGP_NODShiLtJ_T0046618.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35469321 35483542 + Ndufa7 protein_coding processed_transcript MGP_NODShiLtJ_T0046619.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35472803 35483665 + Ndufa7 protein_coding processed_transcript MGP_NODShiLtJ_T0046620.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35473038 35483650 + Ndufa7 protein_coding processed_transcript MGP_NODShiLtJ_T0046621.1 MGP_NODShiLtJ_G0023359.1 mouse_genomes_project 17 35473072 35483670 + Ndufa7 protein_coding retained_intron MGP_NODShiLtJ_T0045963.1 MGP_NODShiLtJ_G0023201.1 mouse_genomes_project 17 26623023 26625705 - MGP_NODShiLtJ_P0045963 Nhlrc4 protein_coding protein_coding MGP_NODShiLtJ_T0045964.1 MGP_NODShiLtJ_G0023201.1 mouse_genomes_project 17 26624944 26625734 - Nhlrc4 protein_coding processed_transcript MGP_NODShiLtJ_T0045965.1 MGP_NODShiLtJ_G0023201.1 mouse_genomes_project 17 26625032 26625604 - Nhlrc4 protein_coding processed_transcript MGP_NODShiLtJ_T0047983.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62407164 62418847 + protein_coding retained_intron MGP_NODShiLtJ_T0047984.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62407313 62432826 + MGP_NODShiLtJ_P0047984 protein_coding protein_coding MGP_NODShiLtJ_T0047985.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62407321 62416060 + MGP_NODShiLtJ_P0047985 protein_coding protein_coding MGP_NODShiLtJ_T0047986.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62407398 62432906 + MGP_NODShiLtJ_P0047986 protein_coding protein_coding MGP_NODShiLtJ_T0047987.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62411175 62427515 + MGP_NODShiLtJ_P0047987 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0047988.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62416815 62418835 + protein_coding retained_intron MGP_NODShiLtJ_T0047989.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62420086 62432892 + protein_coding retained_intron MGP_NODShiLtJ_T0047990.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62427671 62431027 + protein_coding retained_intron MGP_NODShiLtJ_T0047991.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62429588 62431162 + protein_coding retained_intron MGP_NODShiLtJ_T0047992.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62430977 62432260 + protein_coding retained_intron MGP_NODShiLtJ_T0047993.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62431840 62432906 + protein_coding retained_intron MGP_NODShiLtJ_T0047994.1 MGP_NODShiLtJ_G0023750.1 mouse_genomes_project 17 62432346 62432886 + protein_coding retained_intron MGP_NODShiLtJ_T0097978.1 MGP_NODShiLtJ_G0036390.1 mouse_genomes_project 17 88325518 88325637 + n-R5s29 rRNA rRNA MGP_NODShiLtJ_T0006958.1 MGP_NODShiLtJ_G0005714.1 mouse_genomes_project 18 35419672 35420770 + Epb41l4aos lincRNA lincRNA MGP_NODShiLtJ_T0006959.1 MGP_NODShiLtJ_G0005714.1 mouse_genomes_project 18 35419719 35420749 + Epb41l4aos lincRNA lincRNA MGP_NODShiLtJ_T0006943.1 MGP_NODShiLtJ_G0005703.1 mouse_genomes_project 18 8768718 8771121 - 1010001N08Rik lincRNA lincRNA MGP_NODShiLtJ_T0006944.1 MGP_NODShiLtJ_G0005703.1 mouse_genomes_project 18 8769562 8772199 - 1010001N08Rik lincRNA lincRNA MGP_NODShiLtJ_T0006940.1 MGP_NODShiLtJ_G0005700.1 mouse_genomes_project 18 1797522 1837171 + lincRNA lincRNA MGP_NODShiLtJ_T0048559.1 MGP_NODShiLtJ_G0023942.1 mouse_genomes_project 18 232025 290631 + MGP_NODShiLtJ_P0048559 Cul2 protein_coding protein_coding MGP_NODShiLtJ_T0048560.1 MGP_NODShiLtJ_G0023942.1 mouse_genomes_project 18 232262 289642 + MGP_NODShiLtJ_P0048560 Cul2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048561.1 MGP_NODShiLtJ_G0023942.1 mouse_genomes_project 18 232269 290634 + MGP_NODShiLtJ_P0048561 Cul2 protein_coding protein_coding MGP_NODShiLtJ_T0048562.1 MGP_NODShiLtJ_G0023942.1 mouse_genomes_project 18 232294 285788 + MGP_NODShiLtJ_P0048562 Cul2 protein_coding protein_coding MGP_NODShiLtJ_T0048563.1 MGP_NODShiLtJ_G0023942.1 mouse_genomes_project 18 278718 281517 + Cul2 protein_coding processed_transcript MGP_NODShiLtJ_T0048564.1 MGP_NODShiLtJ_G0023942.1 mouse_genomes_project 18 288140 289270 + Cul2 protein_coding processed_transcript MGP_NODShiLtJ_T0049840.1 MGP_NODShiLtJ_G0024413.1 mouse_genomes_project 18 85072356 85095987 - MGP_NODShiLtJ_P0049840 Slc14a1 protein_coding protein_coding MGP_NODShiLtJ_T0049841.1 MGP_NODShiLtJ_G0024413.1 mouse_genomes_project 18 85073915 85117956 - MGP_NODShiLtJ_P0049841 Slc14a1 protein_coding protein_coding MGP_NODShiLtJ_T0049842.1 MGP_NODShiLtJ_G0024413.1 mouse_genomes_project 18 85073915 85095892 - MGP_NODShiLtJ_P0049842 Slc14a1 protein_coding protein_coding MGP_NODShiLtJ_T0049479.1 MGP_NODShiLtJ_G0024302.1 mouse_genomes_project 18 66164040 66182307 - MGP_NODShiLtJ_P0049479 Cdx1 protein_coding protein_coding MGP_NODShiLtJ_T0049423.1 MGP_NODShiLtJ_G0024284.1 mouse_genomes_project 18 63464222 63485222 + MGP_NODShiLtJ_P0049423 Isoc1 protein_coding protein_coding MGP_NODShiLtJ_T0003770.1 MGP_NODShiLtJ_G0003383.1 mouse_genomes_project 18 66921076 66922942 + 1500015A07Rik antisense antisense MGP_NODShiLtJ_T0003771.1 MGP_NODShiLtJ_G0003383.1 mouse_genomes_project 18 66921119 66930596 + 1500015A07Rik antisense antisense MGP_NODShiLtJ_T0003772.1 MGP_NODShiLtJ_G0003383.1 mouse_genomes_project 18 66929034 66930588 + 1500015A07Rik antisense antisense MGP_NODShiLtJ_T0048733.1 MGP_NODShiLtJ_G0023991.1 mouse_genomes_project 18 12769489 12843584 - MGP_NODShiLtJ_P0048733 Ss18 protein_coding protein_coding MGP_NODShiLtJ_T0048734.1 MGP_NODShiLtJ_G0023991.1 mouse_genomes_project 18 12778538 12843553 - MGP_NODShiLtJ_P0048734 Ss18 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048735.1 MGP_NODShiLtJ_G0023991.1 mouse_genomes_project 18 12798407 12843553 - MGP_NODShiLtJ_P0048735 Ss18 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048736.1 MGP_NODShiLtJ_G0023991.1 mouse_genomes_project 18 12804535 12843553 - MGP_NODShiLtJ_P0048736 Ss18 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049129.1 MGP_NODShiLtJ_G0024170.1 mouse_genomes_project 18 39786630 39929365 + MGP_NODShiLtJ_P0049129 Pcdhga6 protein_coding protein_coding MGP_NODShiLtJ_T0049089.1 MGP_NODShiLtJ_G0024137.1 mouse_genomes_project 18 39174772 39218915 + MGP_NODShiLtJ_P0049089 Pcdhac2 protein_coding protein_coding MGP_NODShiLtJ_T0048599.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3095265 3188079 - MGP_NODShiLtJ_P0048599 Arhgap12 protein_coding protein_coding MGP_NODShiLtJ_T0048600.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3095623 3215732 - MGP_NODShiLtJ_P0048600 Arhgap12 protein_coding protein_coding MGP_NODShiLtJ_T0048601.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3096035 3215785 - MGP_NODShiLtJ_P0048601 Arhgap12 protein_coding protein_coding MGP_NODShiLtJ_T0048602.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3096055 3215923 - MGP_NODShiLtJ_P0048602 Arhgap12 protein_coding protein_coding MGP_NODShiLtJ_T0048603.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3097270 3215717 - MGP_NODShiLtJ_P0048603 Arhgap12 protein_coding protein_coding MGP_NODShiLtJ_T0048604.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3097394 3215713 - MGP_NODShiLtJ_P0048604 Arhgap12 protein_coding protein_coding MGP_NODShiLtJ_T0048605.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3103798 3105483 - Arhgap12 protein_coding retained_intron MGP_NODShiLtJ_T0048606.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3110181 3169034 - Arhgap12 protein_coding processed_transcript MGP_NODShiLtJ_T0048607.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3120302 3187696 - MGP_NODShiLtJ_P0048607 Arhgap12 protein_coding protein_coding MGP_NODShiLtJ_T0048608.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3128608 3215795 - Arhgap12 protein_coding processed_transcript MGP_NODShiLtJ_T0048609.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3132896 3141799 - Arhgap12 protein_coding processed_transcript MGP_NODShiLtJ_T0048610.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3133000 3215780 - MGP_NODShiLtJ_P0048610 Arhgap12 protein_coding protein_coding MGP_NODShiLtJ_T0048611.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3135408 3215766 - Arhgap12 protein_coding processed_transcript MGP_NODShiLtJ_T0048612.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3136779 3215760 - Arhgap12 protein_coding processed_transcript MGP_NODShiLtJ_T0048613.1 MGP_NODShiLtJ_G0023951.1 mouse_genomes_project 18 3140512 3142956 - Arhgap12 protein_coding retained_intron MGP_NODShiLtJ_T0049924.1 MGP_NODShiLtJ_G0024438.1 mouse_genomes_project 18 92353775 92376388 - MGP_NODShiLtJ_P0049924 Cndp2 protein_coding protein_coding MGP_NODShiLtJ_T0049925.1 MGP_NODShiLtJ_G0024438.1 mouse_genomes_project 18 92353775 92372748 - MGP_NODShiLtJ_P0049925 Cndp2 protein_coding protein_coding MGP_NODShiLtJ_T0003749.1 MGP_NODShiLtJ_G0003364.1 mouse_genomes_project 18 24029365 24031223 - Gm15972 antisense antisense MGP_NODShiLtJ_T0017460.1 MGP_NODShiLtJ_G0015227.1 mouse_genomes_project 18 2526246 2632376 - Gm10125 processed_transcript antisense MGP_NODShiLtJ_T0017461.1 MGP_NODShiLtJ_G0015227.1 mouse_genomes_project 18 2552637 2555335 - Gm10125 processed_transcript retained_intron MGP_NODShiLtJ_T0017462.1 MGP_NODShiLtJ_G0015227.1 mouse_genomes_project 18 2559518 2632376 - Gm10125 processed_transcript processed_transcript MGP_NODShiLtJ_T0017463.1 MGP_NODShiLtJ_G0015227.1 mouse_genomes_project 18 2559590 2632174 - Gm10125 processed_transcript antisense MGP_NODShiLtJ_T0017464.1 MGP_NODShiLtJ_G0015227.1 mouse_genomes_project 18 2601580 2633488 - Gm10125 processed_transcript antisense MGP_NODShiLtJ_T0017465.1 MGP_NODShiLtJ_G0015227.1 mouse_genomes_project 18 2601580 2632365 - Gm10125 processed_transcript antisense MGP_NODShiLtJ_T0049069.1 MGP_NODShiLtJ_G0024125.1 mouse_genomes_project 18 38941140 39218915 + MGP_NODShiLtJ_P0049069 Pcdha4 protein_coding protein_coding MGP_NODShiLtJ_T0049070.1 MGP_NODShiLtJ_G0024125.1 mouse_genomes_project 18 38941150 38946433 + Pcdha4 protein_coding retained_intron MGP_NODShiLtJ_T0049071.1 MGP_NODShiLtJ_G0024125.1 mouse_genomes_project 18 38941167 39218919 + MGP_NODShiLtJ_P0049071 Pcdha4 protein_coding protein_coding MGP_NODShiLtJ_T0048568.1 MGP_NODShiLtJ_G0023945.1 mouse_genomes_project 18 1289690 1311291 - MGP_NODShiLtJ_P0048568 Map3k8 protein_coding protein_coding MGP_NODShiLtJ_T0048569.1 MGP_NODShiLtJ_G0023945.1 mouse_genomes_project 18 1289703 1311295 - MGP_NODShiLtJ_P0048569 Map3k8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048570.1 MGP_NODShiLtJ_G0023945.1 mouse_genomes_project 18 1289704 1294659 - Map3k8 protein_coding processed_transcript MGP_NODShiLtJ_T0048571.1 MGP_NODShiLtJ_G0023945.1 mouse_genomes_project 18 1292208 1293412 - Map3k8 protein_coding retained_intron MGP_NODShiLtJ_T0048572.1 MGP_NODShiLtJ_G0023945.1 mouse_genomes_project 18 1305818 1311353 - Map3k8 protein_coding retained_intron MGP_NODShiLtJ_T0049645.1 MGP_NODShiLtJ_G0024367.1 mouse_genomes_project 18 74825917 74833340 - MGP_NODShiLtJ_P0049645 4930546C10Rik protein_coding protein_coding MGP_NODShiLtJ_T0048909.1 MGP_NODShiLtJ_G0024071.1 mouse_genomes_project 18 36258009 36281735 - MGP_NODShiLtJ_P0048909 4933408B17Rik protein_coding protein_coding MGP_NODShiLtJ_T0048910.1 MGP_NODShiLtJ_G0024071.1 mouse_genomes_project 18 36258108 36281612 - MGP_NODShiLtJ_P0048910 4933408B17Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049034.1 MGP_NODShiLtJ_G0024109.1 mouse_genomes_project 18 38592526 38594384 + MGP_NODShiLtJ_P0049034 Eif4ebp3 protein_coding protein_coding MGP_NODShiLtJ_T0049772.1 MGP_NODShiLtJ_G0024390.1 mouse_genomes_project 18 81677531 81700609 - MGP_NODShiLtJ_P0049772 Lipg protein_coding protein_coding MGP_NODShiLtJ_T0010181.1 MGP_NODShiLtJ_G0008314.1 mouse_genomes_project 18 98706807 98706877 + Gm22694 miRNA miRNA MGP_NODShiLtJ_T0017506.1 MGP_NODShiLtJ_G0015239.1 mouse_genomes_project 18 82160437 82162215 - Gm20544 processed_transcript processed_transcript MGP_NODShiLtJ_T0049248.1 MGP_NODShiLtJ_G0024208.1 mouse_genomes_project 18 44790012 44857665 - MGP_NODShiLtJ_P0049248 Lars protein_coding protein_coding MGP_NODShiLtJ_T0006945.1 MGP_NODShiLtJ_G0005704.1 mouse_genomes_project 18 9742406 9761887 - Gm6277 lincRNA lincRNA MGP_NODShiLtJ_T0048732.1 MGP_NODShiLtJ_G0023990.1 mouse_genomes_project 18 12553307 12553751 + MGP_NODShiLtJ_P0048732 Gm5160 protein_coding protein_coding MGP_NODShiLtJ_T0048894.1 MGP_NODShiLtJ_G0024065.1 mouse_genomes_project 18 35996817 36002344 + Srp19 protein_coding processed_transcript MGP_NODShiLtJ_T0048895.1 MGP_NODShiLtJ_G0024065.1 mouse_genomes_project 18 35997093 36002520 + Srp19 protein_coding processed_transcript MGP_NODShiLtJ_T0048896.1 MGP_NODShiLtJ_G0024065.1 mouse_genomes_project 18 35997115 36002550 + Srp19 protein_coding retained_intron MGP_NODShiLtJ_T0048897.1 MGP_NODShiLtJ_G0024065.1 mouse_genomes_project 18 35997115 36002598 + MGP_NODShiLtJ_P0048897 Srp19 protein_coding protein_coding MGP_NODShiLtJ_T0048898.1 MGP_NODShiLtJ_G0024065.1 mouse_genomes_project 18 35997128 36002420 + MGP_NODShiLtJ_P0048898 Srp19 protein_coding protein_coding MGP_NODShiLtJ_T0048899.1 MGP_NODShiLtJ_G0024065.1 mouse_genomes_project 18 35997146 36002552 + MGP_NODShiLtJ_P0048899 Srp19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010162.1 MGP_NODShiLtJ_G0008295.1 mouse_genomes_project 18 66096465 66096525 + Mir7220 miRNA miRNA MGP_NODShiLtJ_T0049712.1 MGP_NODShiLtJ_G0024371.1 mouse_genomes_project 18 76240663 76246387 - MGP_NODShiLtJ_P0049712 Dynap protein_coding protein_coding MGP_NODShiLtJ_T0049434.1 MGP_NODShiLtJ_G0024289.1 mouse_genomes_project 18 65365949 65370336 - MGP_NODShiLtJ_P0049434 Gm4841 protein_coding protein_coding MGP_NODShiLtJ_T0013220.1 MGP_NODShiLtJ_G0011328.1 mouse_genomes_project 18 43060903 43061344 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049087.1 MGP_NODShiLtJ_G0024135.1 mouse_genomes_project 18 39029472 39218915 + MGP_NODShiLtJ_P0049087 Pcdha12 protein_coding protein_coding MGP_NODShiLtJ_T0049725.1 MGP_NODShiLtJ_G0024375.1 mouse_genomes_project 18 76614968 76675336 + MGP_NODShiLtJ_P0049725 Mbd2 protein_coding protein_coding MGP_NODShiLtJ_T0049726.1 MGP_NODShiLtJ_G0024375.1 mouse_genomes_project 18 76615113 76632435 + MGP_NODShiLtJ_P0049726 Mbd2 protein_coding protein_coding MGP_NODShiLtJ_T0049727.1 MGP_NODShiLtJ_G0024375.1 mouse_genomes_project 18 76630311 76671998 + MGP_NODShiLtJ_P0049727 Mbd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049728.1 MGP_NODShiLtJ_G0024375.1 mouse_genomes_project 18 76642755 76666540 + Mbd2 protein_coding retained_intron MGP_NODShiLtJ_T0049729.1 MGP_NODShiLtJ_G0024375.1 mouse_genomes_project 18 76667048 76674982 + Mbd2 protein_coding retained_intron MGP_NODShiLtJ_T0049818.1 MGP_NODShiLtJ_G0024404.1 mouse_genomes_project 18 84082718 84160980 + MGP_NODShiLtJ_P0049818 St8sia5 protein_coding protein_coding MGP_NODShiLtJ_T0049819.1 MGP_NODShiLtJ_G0024404.1 mouse_genomes_project 18 84082844 84160850 + MGP_NODShiLtJ_P0049819 St8sia5 protein_coding protein_coding MGP_NODShiLtJ_T0006946.1 MGP_NODShiLtJ_G0005705.1 mouse_genomes_project 18 15293736 15300113 + Gm15328 lincRNA lincRNA MGP_NODShiLtJ_T0011348.1 MGP_NODShiLtJ_G0009481.1 mouse_genomes_project 18 45210952 45211108 + Gm27457 misc_RNA misc_RNA MGP_NODShiLtJ_T0049625.1 MGP_NODShiLtJ_G0024359.1 mouse_genomes_project 18 73439760 73504319 - MGP_NODShiLtJ_P0049625 Ptpn2 protein_coding protein_coding MGP_NODShiLtJ_T0049626.1 MGP_NODShiLtJ_G0024359.1 mouse_genomes_project 18 73439761 73504334 - MGP_NODShiLtJ_P0049626 Ptpn2 protein_coding protein_coding MGP_NODShiLtJ_T0049627.1 MGP_NODShiLtJ_G0024359.1 mouse_genomes_project 18 73445510 73504341 - MGP_NODShiLtJ_P0049627 Ptpn2 protein_coding protein_coding MGP_NODShiLtJ_T0049628.1 MGP_NODShiLtJ_G0024359.1 mouse_genomes_project 18 73450098 73464286 - Ptpn2 protein_coding processed_transcript MGP_NODShiLtJ_T0049754.1 MGP_NODShiLtJ_G0024385.1 mouse_genomes_project 18 80875920 80881269 + MGP_NODShiLtJ_P0049754 Cxxc1 protein_coding protein_coding MGP_NODShiLtJ_T0048669.1 MGP_NODShiLtJ_G0023971.1 mouse_genomes_project 18 8251504 8300454 - MGP_NODShiLtJ_P0048669 Esco1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013204.1 MGP_NODShiLtJ_G0011312.1 mouse_genomes_project 18 24554034 24555515 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006985.1 MGP_NODShiLtJ_G0005733.1 mouse_genomes_project 18 80658208 80660414 + D730045A05Rik lincRNA lincRNA MGP_NODShiLtJ_T0006990.1 MGP_NODShiLtJ_G0005738.1 mouse_genomes_project 18 90280478 90285015 - 2210420H20Rik lincRNA lincRNA MGP_NODShiLtJ_T0049096.1 MGP_NODShiLtJ_G0024143.1 mouse_genomes_project 18 39366062 39370308 + MGP_NODShiLtJ_P0049096 Pcdhb5 protein_coding protein_coding MGP_NODShiLtJ_T0000986.1 MGP_NODShiLtJ_G0000912.1 mouse_genomes_project 18 59999111 60000100 - TEC TEC MGP_NODShiLtJ_T0049126.1 MGP_NODShiLtJ_G0024168.1 mouse_genomes_project 18 39768211 39929365 + MGP_NODShiLtJ_P0049126 Pcdhgb2 protein_coding protein_coding MGP_NODShiLtJ_T0049127.1 MGP_NODShiLtJ_G0024168.1 mouse_genomes_project 18 39768218 39770974 + Pcdhgb2 protein_coding retained_intron MGP_NODShiLtJ_T0049947.1 MGP_NODShiLtJ_G0024446.1 mouse_genomes_project 18 97744431 97952498 + MGP_NODShiLtJ_P0049947 Rttn protein_coding protein_coding MGP_NODShiLtJ_T0099037.1 MGP_NODShiLtJ_G0037431.1 mouse_genomes_project 18 49487567 49487661 - Gm24076 snRNA snRNA MGP_NODShiLtJ_T0048818.1 MGP_NODShiLtJ_G0024029.1 mouse_genomes_project 18 24900891 24934123 - MGP_NODShiLtJ_P0048818 Slc39a6 protein_coding protein_coding MGP_NODShiLtJ_T0048819.1 MGP_NODShiLtJ_G0024029.1 mouse_genomes_project 18 24908648 24933821 - MGP_NODShiLtJ_P0048819 Slc39a6 protein_coding protein_coding MGP_NODShiLtJ_T0048820.1 MGP_NODShiLtJ_G0024029.1 mouse_genomes_project 18 24926640 24929744 - Slc39a6 protein_coding retained_intron MGP_NODShiLtJ_T0048821.1 MGP_NODShiLtJ_G0024029.1 mouse_genomes_project 18 24931790 24933599 - MGP_NODShiLtJ_P0048821 Slc39a6 protein_coding protein_coding MGP_NODShiLtJ_T0003743.1 MGP_NODShiLtJ_G0003361.1 mouse_genomes_project 18 15184540 15185486 + Gm15485 antisense antisense MGP_NODShiLtJ_T0013208.1 MGP_NODShiLtJ_G0011316.1 mouse_genomes_project 18 31780592 31780967 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048521.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 69166 133142 - MGP_NODShiLtJ_P0048521 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048522.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 69472 144945 - MGP_NODShiLtJ_P0048522 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048523.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 69474 144855 - MGP_NODShiLtJ_P0048523 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048524.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 69474 144754 - MGP_NODShiLtJ_P0048524 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048525.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 69474 102687 - MGP_NODShiLtJ_P0048525 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048526.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 69474 144855 - MGP_NODShiLtJ_P0048526 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048527.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 69474 144855 - MGP_NODShiLtJ_P0048527 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048528.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70075 84926 - MGP_NODShiLtJ_P0048528 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048529.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70081 144779 - Crem protein_coding processed_transcript MGP_NODShiLtJ_T0048530.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70379 145014 - MGP_NODShiLtJ_P0048530 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048531.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70382 102684 - MGP_NODShiLtJ_P0048531 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048532.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70508 84904 - MGP_NODShiLtJ_P0048532 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048533.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70541 133058 - MGP_NODShiLtJ_P0048533 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048534.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70632 131025 - MGP_NODShiLtJ_P0048534 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048535.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70652 84289 - MGP_NODShiLtJ_P0048535 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048536.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70664 84235 - MGP_NODShiLtJ_P0048536 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048537.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70676 131029 - MGP_NODShiLtJ_P0048537 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048538.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70690 84926 - MGP_NODShiLtJ_P0048538 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048539.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70693 131025 - MGP_NODShiLtJ_P0048539 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048540.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70703 133058 - MGP_NODShiLtJ_P0048540 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048541.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70703 133058 - MGP_NODShiLtJ_P0048541 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048542.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70703 133058 - MGP_NODShiLtJ_P0048542 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048543.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70703 144799 - MGP_NODShiLtJ_P0048543 Crem protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048544.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70703 133058 - MGP_NODShiLtJ_P0048544 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048545.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70706 114981 - MGP_NODShiLtJ_P0048545 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048546.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70706 115116 - MGP_NODShiLtJ_P0048546 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048547.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70706 114981 - MGP_NODShiLtJ_P0048547 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048548.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70706 131025 - MGP_NODShiLtJ_P0048548 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048549.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70751 84258 - MGP_NODShiLtJ_P0048549 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048550.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70957 131025 - MGP_NODShiLtJ_P0048550 Crem protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048551.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 70963 84895 - MGP_NODShiLtJ_P0048551 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048552.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 71103 115158 - MGP_NODShiLtJ_P0048552 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048553.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 71103 102580 - MGP_NODShiLtJ_P0048553 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048554.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 87054 102669 - Crem protein_coding processed_transcript MGP_NODShiLtJ_T0048555.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 90788 102684 - Crem protein_coding retained_intron MGP_NODShiLtJ_T0048556.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 91211 102682 - Crem protein_coding processed_transcript MGP_NODShiLtJ_T0048557.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 97308 144855 - MGP_NODShiLtJ_P0048557 Crem protein_coding protein_coding MGP_NODShiLtJ_T0048558.1 MGP_NODShiLtJ_G0023941.1 mouse_genomes_project 18 97609 144840 - MGP_NODShiLtJ_P0048558 Crem protein_coding protein_coding MGP_NODShiLtJ_T0013187.1 MGP_NODShiLtJ_G0011295.1 mouse_genomes_project 18 3456102 3456411 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010170.1 MGP_NODShiLtJ_G0008303.1 mouse_genomes_project 18 71824777 71824847 - Mir694 miRNA miRNA MGP_NODShiLtJ_T0100296.1 MGP_NODShiLtJ_G0038690.1 mouse_genomes_project 18 63416075 63416206 - Gm23270 snoRNA snoRNA MGP_NODShiLtJ_T0000989.1 MGP_NODShiLtJ_G0000915.1 mouse_genomes_project 18 87594601 87596122 - TEC TEC MGP_NODShiLtJ_T0048935.1 MGP_NODShiLtJ_G0024080.1 mouse_genomes_project 18 36540643 36547514 + MGP_NODShiLtJ_P0048935 Reep2 protein_coding protein_coding MGP_NODShiLtJ_T0049378.1 MGP_NODShiLtJ_G0024264.1 mouse_genomes_project 18 57504450 57663038 + MGP_NODShiLtJ_P0049378 Snx24 protein_coding protein_coding MGP_NODShiLtJ_T0049379.1 MGP_NODShiLtJ_G0024264.1 mouse_genomes_project 18 57504557 57663038 + MGP_NODShiLtJ_P0049379 Snx24 protein_coding protein_coding MGP_NODShiLtJ_T0049108.1 MGP_NODShiLtJ_G0024153.1 mouse_genomes_project 18 39537193 39540108 + MGP_NODShiLtJ_P0049108 Pcdhb15 protein_coding protein_coding MGP_NODShiLtJ_T0098292.1 MGP_NODShiLtJ_G0036698.1 mouse_genomes_project 18 2609694 2612657 - Gm26575 sense_intronic sense_intronic MGP_NODShiLtJ_T0000979.1 MGP_NODShiLtJ_G0000905.1 mouse_genomes_project 18 2626751 2630420 - TEC TEC MGP_NODShiLtJ_T0100292.1 MGP_NODShiLtJ_G0038686.1 mouse_genomes_project 18 48890822 48890949 + Gm26262 snoRNA snoRNA MGP_NODShiLtJ_T0048769.1 MGP_NODShiLtJ_G0024012.1 mouse_genomes_project 18 20892291 20919370 + MGP_NODShiLtJ_P0048769 Rnf138 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010146.1 MGP_NODShiLtJ_G0008279.1 mouse_genomes_project 18 37338098 37338168 + Mir1949 miRNA miRNA MGP_NODShiLtJ_T0100285.1 MGP_NODShiLtJ_G0038679.1 mouse_genomes_project 18 35419944 35420076 + Gm23639 snoRNA snoRNA MGP_NODShiLtJ_T0048883.1 MGP_NODShiLtJ_G0024062.1 mouse_genomes_project 18 35065786 35075409 + MGP_NODShiLtJ_P0048883 Gm10549 protein_coding protein_coding MGP_NODShiLtJ_T0049470.1 MGP_NODShiLtJ_G0024299.1 mouse_genomes_project 18 66054477 66061210 + MGP_NODShiLtJ_P0049470 Arsi protein_coding protein_coding MGP_NODShiLtJ_T0049773.1 MGP_NODShiLtJ_G0024391.1 mouse_genomes_project 18 81746862 81750757 + MGP_NODShiLtJ_P0049773 Rpl17 protein_coding protein_coding MGP_NODShiLtJ_T0010143.1 MGP_NODShiLtJ_G0008276.1 mouse_genomes_project 18 24221459 24221539 + Gm27506 miRNA miRNA MGP_NODShiLtJ_T0049117.1 MGP_NODShiLtJ_G0024162.1 mouse_genomes_project 18 39717604 39721307 - MGP_NODShiLtJ_P0049117 Taf7 protein_coding protein_coding MGP_NODShiLtJ_T0049781.1 MGP_NODShiLtJ_G0024395.1 mouse_genomes_project 18 82229220 82510398 - MGP_NODShiLtJ_P0049781 Ctif protein_coding protein_coding MGP_NODShiLtJ_T0099047.1 MGP_NODShiLtJ_G0037441.1 mouse_genomes_project 18 68929304 68929417 + Gm24848 snRNA snRNA MGP_NODShiLtJ_T0003751.1 MGP_NODShiLtJ_G0003366.1 mouse_genomes_project 18 38941143 38943052 - antisense antisense MGP_NODShiLtJ_T0049930.1 MGP_NODShiLtJ_G0024440.1 mouse_genomes_project 18 92604664 92634493 + MGP_NODShiLtJ_P0049930 Cyb5a protein_coding protein_coding MGP_NODShiLtJ_T0049931.1 MGP_NODShiLtJ_G0024440.1 mouse_genomes_project 18 92604703 92633684 + MGP_NODShiLtJ_P0049931 Cyb5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049932.1 MGP_NODShiLtJ_G0024440.1 mouse_genomes_project 18 92604733 92627403 + Cyb5a protein_coding retained_intron MGP_NODShiLtJ_T0049933.1 MGP_NODShiLtJ_G0024440.1 mouse_genomes_project 18 92605205 92633954 + MGP_NODShiLtJ_P0049933 Cyb5a protein_coding protein_coding MGP_NODShiLtJ_T0049934.1 MGP_NODShiLtJ_G0024440.1 mouse_genomes_project 18 92631692 92633956 + Cyb5a protein_coding retained_intron MGP_NODShiLtJ_T0011350.1 MGP_NODShiLtJ_G0009483.1 mouse_genomes_project 18 60111708 60111993 - Gm24514 misc_RNA misc_RNA MGP_NODShiLtJ_T0098486.1 MGP_NODShiLtJ_G0036882.1 mouse_genomes_project 18 88322625 88332902 - Gm27238 sense_overlapping sense_overlapping MGP_NODShiLtJ_T0006975.1 MGP_NODShiLtJ_G0005726.1 mouse_genomes_project 18 62975572 62987124 + Gm26507 lincRNA lincRNA MGP_NODShiLtJ_T0017509.1 MGP_NODShiLtJ_G0015241.1 mouse_genomes_project 18 92430876 92432647 - D030046N08Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0013244.1 MGP_NODShiLtJ_G0011352.1 mouse_genomes_project 18 98474062 98474521 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013230.1 MGP_NODShiLtJ_G0011338.1 mouse_genomes_project 18 57186382 57186939 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049009.1 MGP_NODShiLtJ_G0024103.1 mouse_genomes_project 18 38163710 38188358 + MGP_NODShiLtJ_P0049009 Pura protein_coding protein_coding MGP_NODShiLtJ_T0048849.1 MGP_NODShiLtJ_G0024041.1 mouse_genomes_project 18 33094750 33095990 + MGP_NODShiLtJ_P0048849 B930094E09Rik protein_coding protein_coding MGP_NODShiLtJ_T0006957.1 MGP_NODShiLtJ_G0005713.1 mouse_genomes_project 18 34494500 34519746 - 2310026I22Rik lincRNA lincRNA MGP_NODShiLtJ_T0049950.1 MGP_NODShiLtJ_G0024448.1 mouse_genomes_project 18 98164395 98776458 - MGP_NODShiLtJ_P0049950 Dok6 protein_coding protein_coding MGP_NODShiLtJ_T0049951.1 MGP_NODShiLtJ_G0024448.1 mouse_genomes_project 18 98386209 98507310 - Dok6 protein_coding retained_intron MGP_NODShiLtJ_T0049361.1 MGP_NODShiLtJ_G0024255.1 mouse_genomes_project 18 55977861 55978479 - MGP_NODShiLtJ_P0049361 Gm4950 protein_coding protein_coding MGP_NODShiLtJ_T0049107.1 MGP_NODShiLtJ_G0024152.1 mouse_genomes_project 18 39510441 39519458 + MGP_NODShiLtJ_P0049107 Pcdhb14 protein_coding protein_coding MGP_NODShiLtJ_T0099024.1 MGP_NODShiLtJ_G0037418.1 mouse_genomes_project 18 5108550 5108657 + Gm24292 snRNA snRNA MGP_NODShiLtJ_T0013205.1 MGP_NODShiLtJ_G0011313.1 mouse_genomes_project 18 25801235 25801767 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049791.1 MGP_NODShiLtJ_G0024399.1 mouse_genomes_project 18 83791643 83803231 + MGP_NODShiLtJ_P0049791 Ier3ip1 protein_coding protein_coding MGP_NODShiLtJ_T0049792.1 MGP_NODShiLtJ_G0024399.1 mouse_genomes_project 18 83791671 83803231 + Ier3ip1 protein_coding processed_transcript MGP_NODShiLtJ_T0049793.1 MGP_NODShiLtJ_G0024399.1 mouse_genomes_project 18 83791689 83801374 + Ier3ip1 protein_coding retained_intron MGP_NODShiLtJ_T0049795.1 MGP_NODShiLtJ_G0024399.1 mouse_genomes_project 18 83800909 83802315 + Ier3ip1 protein_coding retained_intron MGP_NODShiLtJ_T0013209.1 MGP_NODShiLtJ_G0011317.1 mouse_genomes_project 18 33537167 33537325 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049386.1 MGP_NODShiLtJ_G0024269.1 mouse_genomes_project 18 59327339 59437494 - MGP_NODShiLtJ_P0049386 Zfp608 protein_coding protein_coding MGP_NODShiLtJ_T0049099.1 MGP_NODShiLtJ_G0024145.1 mouse_genomes_project 18 39389619 39393746 + MGP_NODShiLtJ_P0049099 Pcdhb7 protein_coding protein_coding MGP_NODShiLtJ_T0049246.1 MGP_NODShiLtJ_G0024206.1 mouse_genomes_project 18 44760022 44760316 + MGP_NODShiLtJ_P0049246 Gm5689 protein_coding protein_coding MGP_NODShiLtJ_T0010163.1 MGP_NODShiLtJ_G0008296.1 mouse_genomes_project 18 66100598 66100666 + Mir6982 miRNA miRNA MGP_NODShiLtJ_T0049518.1 MGP_NODShiLtJ_G0024319.1 mouse_genomes_project 18 67561468 67718369 + MGP_NODShiLtJ_P0049518 Htr4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013206.1 MGP_NODShiLtJ_G0011314.1 mouse_genomes_project 18 26257017 26259172 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049274.1 MGP_NODShiLtJ_G0024220.1 mouse_genomes_project 18 46739019 46808605 + MGP_NODShiLtJ_P0049274 Spink5 protein_coding protein_coding MGP_NODShiLtJ_T0049820.1 MGP_NODShiLtJ_G0024405.1 mouse_genomes_project 18 84185110 84363570 + MGP_NODShiLtJ_P0049820 Loxhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049821.1 MGP_NODShiLtJ_G0024405.1 mouse_genomes_project 18 84214375 84296231 + MGP_NODShiLtJ_P0049821 Loxhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049822.1 MGP_NODShiLtJ_G0024405.1 mouse_genomes_project 18 84242029 84326726 + MGP_NODShiLtJ_P0049822 Loxhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049823.1 MGP_NODShiLtJ_G0024405.1 mouse_genomes_project 18 84289013 84363654 + MGP_NODShiLtJ_P0049823 Loxhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049824.1 MGP_NODShiLtJ_G0024405.1 mouse_genomes_project 18 84324762 84363199 + MGP_NODShiLtJ_P0049824 Loxhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049864.1 MGP_NODShiLtJ_G0024423.1 mouse_genomes_project 18 87509205 87534242 - MGP_NODShiLtJ_P0049864 Hsbp1l1 protein_coding protein_coding MGP_NODShiLtJ_T0013219.1 MGP_NODShiLtJ_G0011327.1 mouse_genomes_project 18 41551220 41551571 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003761.1 MGP_NODShiLtJ_G0003376.1 mouse_genomes_project 18 41451052 41507452 - Gm15336 antisense antisense MGP_NODShiLtJ_T0101774.1 MGP_NODShiLtJ_G0039942.1 mouse_genomes_project 18 39023183 39023970 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0049529.1 MGP_NODShiLtJ_G0024326.1 mouse_genomes_project 18 68269209 68294462 + MGP_NODShiLtJ_P0049529 Napg protein_coding protein_coding MGP_NODShiLtJ_T0049530.1 MGP_NODShiLtJ_G0024326.1 mouse_genomes_project 18 68269234 68272027 + Napg protein_coding retained_intron MGP_NODShiLtJ_T0049531.1 MGP_NODShiLtJ_G0024326.1 mouse_genomes_project 18 68269274 68291944 + MGP_NODShiLtJ_P0049531 Napg protein_coding protein_coding MGP_NODShiLtJ_T0049532.1 MGP_NODShiLtJ_G0024326.1 mouse_genomes_project 18 68269295 68274159 + Napg protein_coding retained_intron MGP_NODShiLtJ_T0049533.1 MGP_NODShiLtJ_G0024326.1 mouse_genomes_project 18 68271611 68274387 + Napg protein_coding retained_intron MGP_NODShiLtJ_T0049534.1 MGP_NODShiLtJ_G0024326.1 mouse_genomes_project 18 68277329 68285028 + Napg protein_coding processed_transcript MGP_NODShiLtJ_T0049535.1 MGP_NODShiLtJ_G0024326.1 mouse_genomes_project 18 68277412 68289586 + Napg protein_coding retained_intron MGP_NODShiLtJ_T0049536.1 MGP_NODShiLtJ_G0024326.1 mouse_genomes_project 18 68281407 68290042 + Napg protein_coding processed_transcript MGP_NODShiLtJ_T0100288.1 MGP_NODShiLtJ_G0038682.1 mouse_genomes_project 18 36651980 36652050 - Gm26109 snoRNA snoRNA MGP_NODShiLtJ_T0101775.1 MGP_NODShiLtJ_G0039943.1 mouse_genomes_project 18 57799237 57799724 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0010152.1 MGP_NODShiLtJ_G0008285.1 mouse_genomes_project 18 40079305 40079365 - Mir6980 miRNA miRNA MGP_NODShiLtJ_T0013211.1 MGP_NODShiLtJ_G0011319.1 mouse_genomes_project 18 38531175 38531947 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0097991.1 MGP_NODShiLtJ_G0036403.1 mouse_genomes_project 18 80165394 80165542 - n-R5-8s1 rRNA rRNA MGP_NODShiLtJ_T0100293.1 MGP_NODShiLtJ_G0038687.1 mouse_genomes_project 18 50088534 50088679 - Gm22791 snoRNA snoRNA MGP_NODShiLtJ_T0049238.1 MGP_NODShiLtJ_G0024201.1 mouse_genomes_project 18 42538034 42538757 + MGP_NODShiLtJ_P0049238 2900055J20Rik protein_coding protein_coding MGP_NODShiLtJ_T0048775.1 MGP_NODShiLtJ_G0024016.1 mouse_genomes_project 18 21775180 22216597 - MGP_NODShiLtJ_P0048775 Ccdc178 protein_coding protein_coding MGP_NODShiLtJ_T0048776.1 MGP_NODShiLtJ_G0024016.1 mouse_genomes_project 18 21775581 22210209 - MGP_NODShiLtJ_P0048776 Ccdc178 protein_coding protein_coding MGP_NODShiLtJ_T0049092.1 MGP_NODShiLtJ_G0024140.1 mouse_genomes_project 18 39339102 39341917 + MGP_NODShiLtJ_P0049092 Pcdhb2 protein_coding protein_coding MGP_NODShiLtJ_T0049093.1 MGP_NODShiLtJ_G0024140.1 mouse_genomes_project 18 39339130 39340712 + MGP_NODShiLtJ_P0049093 Pcdhb2 protein_coding protein_coding MGP_NODShiLtJ_T0013245.1 MGP_NODShiLtJ_G0011353.1 mouse_genomes_project 18 98967302 98968262 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099042.1 MGP_NODShiLtJ_G0037436.1 mouse_genomes_project 18 59657345 59657425 + Gm22597 snRNA snRNA MGP_NODShiLtJ_T0010137.1 MGP_NODShiLtJ_G0008270.1 mouse_genomes_project 18 8036157 8036323 - Gm44409 miRNA miRNA MGP_NODShiLtJ_T0049876.1 MGP_NODShiLtJ_G0024425.1 mouse_genomes_project 18 87586982 87661926 - MGP_NODShiLtJ_P0049876 Kcng2 protein_coding protein_coding MGP_NODShiLtJ_T0049877.1 MGP_NODShiLtJ_G0024425.1 mouse_genomes_project 18 87615012 87661008 - MGP_NODShiLtJ_P0049877 Kcng2 protein_coding protein_coding MGP_NODShiLtJ_T0049878.1 MGP_NODShiLtJ_G0024425.1 mouse_genomes_project 18 87615277 87661322 - MGP_NODShiLtJ_P0049878 Kcng2 protein_coding protein_coding MGP_NODShiLtJ_T0049094.1 MGP_NODShiLtJ_G0024141.1 mouse_genomes_project 18 39346973 39350497 + MGP_NODShiLtJ_P0049094 Pcdhb3 protein_coding protein_coding MGP_NODShiLtJ_T0013239.1 MGP_NODShiLtJ_G0011347.1 mouse_genomes_project 18 80971017 80972534 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049251.1 MGP_NODShiLtJ_G0024210.1 mouse_genomes_project 18 45013518 45016218 + MGP_NODShiLtJ_P0049251 Pou4f3 protein_coding protein_coding MGP_NODShiLtJ_T0049915.1 MGP_NODShiLtJ_G0024436.1 mouse_genomes_project 18 91755347 92237991 - MGP_NODShiLtJ_P0049915 Zfp407 protein_coding protein_coding MGP_NODShiLtJ_T0049916.1 MGP_NODShiLtJ_G0024436.1 mouse_genomes_project 18 91840351 92270016 - MGP_NODShiLtJ_P0049916 Zfp407 protein_coding protein_coding MGP_NODShiLtJ_T0049917.1 MGP_NODShiLtJ_G0024436.1 mouse_genomes_project 18 91917784 92058853 - Zfp407 protein_coding processed_transcript MGP_NODShiLtJ_T0049918.1 MGP_NODShiLtJ_G0024436.1 mouse_genomes_project 18 92076364 92081299 - Zfp407 protein_coding retained_intron MGP_NODShiLtJ_T0049919.1 MGP_NODShiLtJ_G0024436.1 mouse_genomes_project 18 92166427 92237941 - Zfp407 protein_coding processed_transcript MGP_NODShiLtJ_T0049920.1 MGP_NODShiLtJ_G0024436.1 mouse_genomes_project 18 92230683 92270237 - Zfp407 protein_coding processed_transcript MGP_NODShiLtJ_T0010151.1 MGP_NODShiLtJ_G0008284.1 mouse_genomes_project 18 40062919 40063034 - Mir6981 miRNA miRNA MGP_NODShiLtJ_T0048940.1 MGP_NODShiLtJ_G0024083.1 mouse_genomes_project 18 36646724 36664369 - MGP_NODShiLtJ_P0048940 Hspa9 protein_coding protein_coding MGP_NODShiLtJ_T0048941.1 MGP_NODShiLtJ_G0024083.1 mouse_genomes_project 18 36647577 36648621 - Hspa9 protein_coding retained_intron MGP_NODShiLtJ_T0048942.1 MGP_NODShiLtJ_G0024083.1 mouse_genomes_project 18 36648006 36650199 - Hspa9 protein_coding retained_intron MGP_NODShiLtJ_T0048943.1 MGP_NODShiLtJ_G0024083.1 mouse_genomes_project 18 36658183 36661585 - Hspa9 protein_coding retained_intron MGP_NODShiLtJ_T0013188.1 MGP_NODShiLtJ_G0011296.1 mouse_genomes_project 18 4828515 4828923 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099060.1 MGP_NODShiLtJ_G0037454.1 mouse_genomes_project 18 99349255 99349319 + Gm23859 snRNA snRNA MGP_NODShiLtJ_T0049307.1 MGP_NODShiLtJ_G0024236.1 mouse_genomes_project 18 49274518 49308832 - MGP_NODShiLtJ_P0049307 Ccdc112 protein_coding protein_coding MGP_NODShiLtJ_T0048984.1 MGP_NODShiLtJ_G0024094.1 mouse_genomes_project 18 37447380 37453904 - MGP_NODShiLtJ_P0048984 Spata24 protein_coding protein_coding MGP_NODShiLtJ_T0048985.1 MGP_NODShiLtJ_G0024094.1 mouse_genomes_project 18 37451734 37453904 - MGP_NODShiLtJ_P0048985 Spata24 protein_coding protein_coding MGP_NODShiLtJ_T0010150.1 MGP_NODShiLtJ_G0008283.1 mouse_genomes_project 18 39942072 39942128 - Mir6979 miRNA miRNA MGP_NODShiLtJ_T0048900.1 MGP_NODShiLtJ_G0024066.1 mouse_genomes_project 18 36011949 36040499 - MGP_NODShiLtJ_P0048900 Reep5 protein_coding protein_coding MGP_NODShiLtJ_T0013207.1 MGP_NODShiLtJ_G0011315.1 mouse_genomes_project 18 31744774 31745251 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099034.1 MGP_NODShiLtJ_G0037428.1 mouse_genomes_project 18 35845571 35845633 - Gm23411 snRNA snRNA MGP_NODShiLtJ_T0048729.1 MGP_NODShiLtJ_G0023987.1 mouse_genomes_project 18 10982312 11003463 + MGP_NODShiLtJ_P0048729 Impact protein_coding protein_coding MGP_NODShiLtJ_T0017474.1 MGP_NODShiLtJ_G0015230.1 mouse_genomes_project 18 39827933 39837575 - Gm26672 processed_transcript antisense MGP_NODShiLtJ_T0017475.1 MGP_NODShiLtJ_G0015230.1 mouse_genomes_project 18 39833727 39848810 - Gm26672 processed_transcript antisense MGP_NODShiLtJ_T0017476.1 MGP_NODShiLtJ_G0015230.1 mouse_genomes_project 18 39833869 39849511 - Gm26672 processed_transcript antisense MGP_NODShiLtJ_T0017477.1 MGP_NODShiLtJ_G0015230.1 mouse_genomes_project 18 39836438 39837969 - Gm26672 processed_transcript retained_intron MGP_NODShiLtJ_T0097786.1 MGP_NODShiLtJ_G0036198.1 mouse_genomes_project 18 84667043 84668275 + pseudogene pseudogene MGP_NODShiLtJ_T0049359.1 MGP_NODShiLtJ_G0024253.1 mouse_genomes_project 18 54304175 54305219 - MGP_NODShiLtJ_P0049359 Hdhd1a protein_coding protein_coding MGP_NODShiLtJ_T0098151.1 MGP_NODShiLtJ_G0036563.1 mouse_genomes_project 18 27587812 27588040 - Gm26106 ribozyme ribozyme MGP_NODShiLtJ_T0048904.1 MGP_NODShiLtJ_G0024069.1 mouse_genomes_project 18 36218164 36224117 + MGP_NODShiLtJ_P0048904 Wnt8a protein_coding protein_coding MGP_NODShiLtJ_T0048824.1 MGP_NODShiLtJ_G0024032.1 mouse_genomes_project 18 25042126 25042435 - MGP_NODShiLtJ_P0048824 Gm9955 protein_coding protein_coding MGP_NODShiLtJ_T0048874.1 MGP_NODShiLtJ_G0024058.1 mouse_genomes_project 18 34406364 34439794 + MGP_NODShiLtJ_P0048874 Wdr36 protein_coding protein_coding MGP_NODShiLtJ_T0048875.1 MGP_NODShiLtJ_G0024058.1 mouse_genomes_project 18 34406364 34439864 + MGP_NODShiLtJ_P0048875 Wdr36 protein_coding protein_coding MGP_NODShiLtJ_T0010158.1 MGP_NODShiLtJ_G0008291.1 mouse_genomes_project 18 62399918 62400014 + Gm44491 miRNA miRNA MGP_NODShiLtJ_T0100302.1 MGP_NODShiLtJ_G0038696.1 mouse_genomes_project 18 81747836 81747901 + Gm23301 snoRNA snoRNA MGP_NODShiLtJ_T0010171.1 MGP_NODShiLtJ_G0008304.1 mouse_genomes_project 18 74076736 74076790 - Mir7219 miRNA miRNA MGP_NODShiLtJ_T0048678.1 MGP_NODShiLtJ_G0023975.1 mouse_genomes_project 18 8772141 8806891 + MGP_NODShiLtJ_P0048678 Gata6 protein_coding protein_coding MGP_NODShiLtJ_T0049852.1 MGP_NODShiLtJ_G0024422.1 mouse_genomes_project 18 87465408 87494353 + MGP_NODShiLtJ_P0049852 Txnl4a protein_coding protein_coding MGP_NODShiLtJ_T0049856.1 MGP_NODShiLtJ_G0024422.1 mouse_genomes_project 18 87465476 87493025 + MGP_NODShiLtJ_P0049856 Txnl4a protein_coding protein_coding MGP_NODShiLtJ_T0049858.1 MGP_NODShiLtJ_G0024422.1 mouse_genomes_project 18 87465507 87484289 + Txnl4a protein_coding retained_intron MGP_NODShiLtJ_T0049863.1 MGP_NODShiLtJ_G0024422.1 mouse_genomes_project 18 87473981 87493161 + Txnl4a protein_coding processed_transcript MGP_NODShiLtJ_T0100308.1 MGP_NODShiLtJ_G0038702.1 mouse_genomes_project 18 99644208 99644337 + Gm25418 snoRNA snoRNA MGP_NODShiLtJ_T0003737.1 MGP_NODShiLtJ_G0003356.1 mouse_genomes_project 18 3301129 3314554 + Gm17036 antisense antisense MGP_NODShiLtJ_T0049517.1 MGP_NODShiLtJ_G0024318.1 mouse_genomes_project 18 67411178 67415459 + MGP_NODShiLtJ_P0049517 Gm9949 protein_coding protein_coding MGP_NODShiLtJ_T0049435.1 MGP_NODShiLtJ_G0024290.1 mouse_genomes_project 18 65594989 65623678 - MGP_NODShiLtJ_P0049435 Smim3 protein_coding protein_coding MGP_NODShiLtJ_T0100306.1 MGP_NODShiLtJ_G0038700.1 mouse_genomes_project 18 89424745 89424873 + Gm26012 snoRNA snoRNA MGP_NODShiLtJ_T0048885.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35879068 35979185 + MGP_NODShiLtJ_P0048885 Apc protein_coding protein_coding MGP_NODShiLtJ_T0048886.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35879128 35984287 + MGP_NODShiLtJ_P0048886 Apc protein_coding protein_coding MGP_NODShiLtJ_T0048887.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35879128 35987876 + MGP_NODShiLtJ_P0048887 Apc protein_coding protein_coding MGP_NODShiLtJ_T0048888.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35879157 35965124 + Apc protein_coding retained_intron MGP_NODShiLtJ_T0048889.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35879396 35936265 + MGP_NODShiLtJ_P0048889 Apc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048890.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35906728 35922727 + Apc protein_coding retained_intron MGP_NODShiLtJ_T0048891.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35906732 35952113 + MGP_NODShiLtJ_P0048891 Apc protein_coding protein_coding MGP_NODShiLtJ_T0048892.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35964887 35980005 + MGP_NODShiLtJ_P0048892 Apc protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048893.1 MGP_NODShiLtJ_G0024064.1 mouse_genomes_project 18 35966182 35976416 + Apc protein_coding processed_transcript MGP_NODShiLtJ_T0049831.1 MGP_NODShiLtJ_G0024408.1 mouse_genomes_project 18 84724077 84734290 - MGP_NODShiLtJ_P0049831 Haus1 protein_coding protein_coding MGP_NODShiLtJ_T0048836.1 MGP_NODShiLtJ_G0024036.1 mouse_genomes_project 18 25891001 26182727 - MGP_NODShiLtJ_P0048836 Celf4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048837.1 MGP_NODShiLtJ_G0024036.1 mouse_genomes_project 18 25891014 26183056 - MGP_NODShiLtJ_P0048837 Celf4 protein_coding protein_coding MGP_NODShiLtJ_T0048838.1 MGP_NODShiLtJ_G0024036.1 mouse_genomes_project 18 25891014 26183056 - MGP_NODShiLtJ_P0048838 Celf4 protein_coding protein_coding MGP_NODShiLtJ_T0049141.1 MGP_NODShiLtJ_G0024178.1 mouse_genomes_project 18 39832977 39929365 + MGP_NODShiLtJ_P0049141 Pcdhgb7 protein_coding protein_coding MGP_NODShiLtJ_T0049558.1 MGP_NODShiLtJ_G0024335.1 mouse_genomes_project 18 70363608 70728868 + MGP_NODShiLtJ_P0049558 Nedd4l protein_coding protein_coding MGP_NODShiLtJ_T0049559.1 MGP_NODShiLtJ_G0024335.1 mouse_genomes_project 18 70640667 70728863 + MGP_NODShiLtJ_P0049559 Nedd4l protein_coding protein_coding MGP_NODShiLtJ_T0049879.1 MGP_NODShiLtJ_G0024426.1 mouse_genomes_project 18 87719864 87781704 - MGP_NODShiLtJ_P0049879 Ctdp1 protein_coding protein_coding MGP_NODShiLtJ_T0049880.1 MGP_NODShiLtJ_G0024426.1 mouse_genomes_project 18 87719870 87752881 - MGP_NODShiLtJ_P0049880 Ctdp1 protein_coding protein_coding MGP_NODShiLtJ_T0049881.1 MGP_NODShiLtJ_G0024426.1 mouse_genomes_project 18 87720641 87752810 - Ctdp1 protein_coding processed_transcript MGP_NODShiLtJ_T0097985.1 MGP_NODShiLtJ_G0036397.1 mouse_genomes_project 18 36333256 36333375 + n-R5s25 rRNA rRNA MGP_NODShiLtJ_T0049485.1 MGP_NODShiLtJ_G0024305.1 mouse_genomes_project 18 66282449 66330086 - MGP_NODShiLtJ_P0049485 Hmgxb3 protein_coding protein_coding MGP_NODShiLtJ_T0049526.1 MGP_NODShiLtJ_G0024324.1 mouse_genomes_project 18 67925205 67926026 + MGP_NODShiLtJ_P0049526 Gm17732 protein_coding protein_coding MGP_NODShiLtJ_T0049953.1 MGP_NODShiLtJ_G0024450.1 mouse_genomes_project 18 99736147 99754620 + MGP_NODShiLtJ_P0049953 unknown_likely_coding unknown_likely_coding MGP_NODShiLtJ_T0010169.1 MGP_NODShiLtJ_G0008302.1 mouse_genomes_project 18 70759678 70759744 + Mir122 miRNA miRNA MGP_NODShiLtJ_T0049363.1 MGP_NODShiLtJ_G0024257.1 mouse_genomes_project 18 56653305 56680670 + MGP_NODShiLtJ_P0049363 Srfbp1 protein_coding protein_coding MGP_NODShiLtJ_T0099036.1 MGP_NODShiLtJ_G0037430.1 mouse_genomes_project 18 45731485 45731592 - Gm22264 snRNA snRNA MGP_NODShiLtJ_T0049607.1 MGP_NODShiLtJ_G0024347.1 mouse_genomes_project 18 72524926 72527684 - MGP_NODShiLtJ_P0049607 Mc4r protein_coding protein_coding MGP_NODShiLtJ_T0049064.1 MGP_NODShiLtJ_G0024122.1 mouse_genomes_project 18 38911095 39218919 + MGP_NODShiLtJ_P0049064 Pcdha1 protein_coding protein_coding MGP_NODShiLtJ_T0049065.1 MGP_NODShiLtJ_G0024122.1 mouse_genomes_project 18 38911196 39218915 + MGP_NODShiLtJ_P0049065 Pcdha1 protein_coding protein_coding MGP_NODShiLtJ_T0003782.1 MGP_NODShiLtJ_G0003388.1 mouse_genomes_project 18 87615668 87618937 + Gm26676 antisense antisense MGP_NODShiLtJ_T0099048.1 MGP_NODShiLtJ_G0037442.1 mouse_genomes_project 18 69304060 69304135 - Gm24384 snRNA snRNA MGP_NODShiLtJ_T0048944.1 MGP_NODShiLtJ_G0024084.1 mouse_genomes_project 18 36851667 36997820 + MGP_NODShiLtJ_P0048944 Ctnna1 protein_coding protein_coding MGP_NODShiLtJ_T0049464.1 MGP_NODShiLtJ_G0024298.1 mouse_genomes_project 18 65951087 65988524 - MGP_NODShiLtJ_P0049464 Tcof1 protein_coding protein_coding MGP_NODShiLtJ_T0049465.1 MGP_NODShiLtJ_G0024298.1 mouse_genomes_project 18 65951087 65988482 - MGP_NODShiLtJ_P0049465 Tcof1 protein_coding protein_coding MGP_NODShiLtJ_T0049466.1 MGP_NODShiLtJ_G0024298.1 mouse_genomes_project 18 65953277 65988512 - MGP_NODShiLtJ_P0049466 Tcof1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049467.1 MGP_NODShiLtJ_G0024298.1 mouse_genomes_project 18 65955309 65988471 - MGP_NODShiLtJ_P0049467 Tcof1 protein_coding protein_coding MGP_NODShiLtJ_T0049468.1 MGP_NODShiLtJ_G0024298.1 mouse_genomes_project 18 65965309 65966259 - Tcof1 protein_coding retained_intron MGP_NODShiLtJ_T0049469.1 MGP_NODShiLtJ_G0024298.1 mouse_genomes_project 18 65976752 65987999 - MGP_NODShiLtJ_P0049469 Tcof1 protein_coding protein_coding MGP_NODShiLtJ_T0049047.1 MGP_NODShiLtJ_G0024114.1 mouse_genomes_project 18 38675569 38682797 + MGP_NODShiLtJ_P0049047 Tmco6 protein_coding protein_coding MGP_NODShiLtJ_T0049262.1 MGP_NODShiLtJ_G0024215.1 mouse_genomes_project 18 46023170 46144833 - MGP_NODShiLtJ_P0049262 Dpysl3 protein_coding protein_coding MGP_NODShiLtJ_T0049263.1 MGP_NODShiLtJ_G0024215.1 mouse_genomes_project 18 46024913 46026223 - Dpysl3 protein_coding processed_transcript MGP_NODShiLtJ_T0049264.1 MGP_NODShiLtJ_G0024215.1 mouse_genomes_project 18 46026419 46070829 - MGP_NODShiLtJ_P0049264 Dpysl3 protein_coding protein_coding MGP_NODShiLtJ_T0049265.1 MGP_NODShiLtJ_G0024215.1 mouse_genomes_project 18 46026480 46090944 - MGP_NODShiLtJ_P0049265 Dpysl3 protein_coding protein_coding MGP_NODShiLtJ_T0049266.1 MGP_NODShiLtJ_G0024215.1 mouse_genomes_project 18 46032726 46043845 - MGP_NODShiLtJ_P0049266 Dpysl3 protein_coding protein_coding MGP_NODShiLtJ_T0049267.1 MGP_NODShiLtJ_G0024215.1 mouse_genomes_project 18 46035924 46043440 - MGP_NODShiLtJ_P0049267 Dpysl3 protein_coding protein_coding MGP_NODShiLtJ_T0049817.1 MGP_NODShiLtJ_G0024403.1 mouse_genomes_project 18 84081871 84083123 - MGP_NODShiLtJ_P0049817 Gm7276 protein_coding protein_coding MGP_NODShiLtJ_T0100295.1 MGP_NODShiLtJ_G0038689.1 mouse_genomes_project 18 60787500 60787635 + Gm23555 snoRNA snoRNA MGP_NODShiLtJ_T0049742.1 MGP_NODShiLtJ_G0024381.1 mouse_genomes_project 18 80494964 80514748 + MGP_NODShiLtJ_P0049742 Mro protein_coding protein_coding MGP_NODShiLtJ_T0049743.1 MGP_NODShiLtJ_G0024381.1 mouse_genomes_project 18 80494966 80515100 + MGP_NODShiLtJ_P0049743 Mro protein_coding protein_coding MGP_NODShiLtJ_T0049744.1 MGP_NODShiLtJ_G0024381.1 mouse_genomes_project 18 80494973 80517299 + Mro protein_coding processed_transcript MGP_NODShiLtJ_T0049745.1 MGP_NODShiLtJ_G0024381.1 mouse_genomes_project 18 80494981 80514748 + MGP_NODShiLtJ_P0049745 Mro protein_coding protein_coding MGP_NODShiLtJ_T0049746.1 MGP_NODShiLtJ_G0024381.1 mouse_genomes_project 18 80499145 80505716 + Mro protein_coding retained_intron MGP_NODShiLtJ_T0049747.1 MGP_NODShiLtJ_G0024381.1 mouse_genomes_project 18 80499186 80507405 + MGP_NODShiLtJ_P0049747 Mro protein_coding protein_coding MGP_NODShiLtJ_T0049310.1 MGP_NODShiLtJ_G0024239.1 mouse_genomes_project 18 49586182 49628303 - MGP_NODShiLtJ_P0049310 Tmed7 protein_coding protein_coding MGP_NODShiLtJ_T0049312.1 MGP_NODShiLtJ_G0024239.1 mouse_genomes_project 18 49612478 49628505 - Tmed7 protein_coding retained_intron MGP_NODShiLtJ_T0049313.1 MGP_NODShiLtJ_G0024239.1 mouse_genomes_project 18 49614900 49628524 - MGP_NODShiLtJ_P0049313 Tmed7 protein_coding protein_coding MGP_NODShiLtJ_T0048756.1 MGP_NODShiLtJ_G0024003.1 mouse_genomes_project 18 20114582 20215364 + MGP_NODShiLtJ_P0048756 protein_coding protein_coding MGP_NODShiLtJ_T0099032.1 MGP_NODShiLtJ_G0037426.1 mouse_genomes_project 18 34587960 34588064 - Gm22814 snRNA snRNA MGP_NODShiLtJ_T0049584.1 MGP_NODShiLtJ_G0024340.1 mouse_genomes_project 18 71352723 71369866 + MGP_NODShiLtJ_P0049584 Sec11c protein_coding protein_coding MGP_NODShiLtJ_T0049585.1 MGP_NODShiLtJ_G0024340.1 mouse_genomes_project 18 71352724 71369857 + MGP_NODShiLtJ_P0049585 Sec11c protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049586.1 MGP_NODShiLtJ_G0024340.1 mouse_genomes_project 18 71352746 71364927 + MGP_NODShiLtJ_P0049586 Sec11c protein_coding protein_coding MGP_NODShiLtJ_T0049587.1 MGP_NODShiLtJ_G0024340.1 mouse_genomes_project 18 71352777 71369858 + Sec11c protein_coding retained_intron MGP_NODShiLtJ_T0049588.1 MGP_NODShiLtJ_G0024340.1 mouse_genomes_project 18 71353476 71364977 + Sec11c protein_coding processed_transcript MGP_NODShiLtJ_T0049589.1 MGP_NODShiLtJ_G0024340.1 mouse_genomes_project 18 71358850 71369861 + Sec11c protein_coding processed_transcript MGP_NODShiLtJ_T0049590.1 MGP_NODShiLtJ_G0024340.1 mouse_genomes_project 18 71366214 71369861 + Sec11c protein_coding processed_transcript MGP_NODShiLtJ_T0011358.1 MGP_NODShiLtJ_G0009491.1 mouse_genomes_project 18 92461845 92462135 - Gm22014 misc_RNA misc_RNA MGP_NODShiLtJ_T0097982.1 MGP_NODShiLtJ_G0036394.1 mouse_genomes_project 18 19455482 19455580 + Gm24238 rRNA rRNA MGP_NODShiLtJ_T0049889.1 MGP_NODShiLtJ_G0024430.1 mouse_genomes_project 18 89878185 89892441 - MGP_NODShiLtJ_P0049889 Galr1 protein_coding protein_coding MGP_NODShiLtJ_T0000987.1 MGP_NODShiLtJ_G0000913.1 mouse_genomes_project 18 67150425 67150670 - TEC TEC MGP_NODShiLtJ_T0049509.1 MGP_NODShiLtJ_G0024313.1 mouse_genomes_project 18 66906197 66921018 - MGP_NODShiLtJ_P0049509 Grpel2 protein_coding protein_coding MGP_NODShiLtJ_T0010176.1 MGP_NODShiLtJ_G0008309.1 mouse_genomes_project 18 83012087 83012188 + Mir6358 miRNA miRNA MGP_NODShiLtJ_T0003766.1 MGP_NODShiLtJ_G0003380.1 mouse_genomes_project 18 48615954 48849874 - antisense antisense MGP_NODShiLtJ_T0003767.1 MGP_NODShiLtJ_G0003380.1 mouse_genomes_project 18 48617596 48817409 - antisense antisense MGP_NODShiLtJ_T0048930.1 MGP_NODShiLtJ_G0024077.1 mouse_genomes_project 18 36429437 36430824 + MGP_NODShiLtJ_P0048930 Gm3550 protein_coding protein_coding MGP_NODShiLtJ_T0048799.1 MGP_NODShiLtJ_G0024021.1 mouse_genomes_project 18 24231861 24241845 + MGP_NODShiLtJ_P0048799 Zfp397 protein_coding protein_coding MGP_NODShiLtJ_T0048633.1 MGP_NODShiLtJ_G0023958.1 mouse_genomes_project 18 4557748 4878086 - MGP_NODShiLtJ_P0048633 Mpp7 protein_coding protein_coding MGP_NODShiLtJ_T0011349.1 MGP_NODShiLtJ_G0009482.1 mouse_genomes_project 18 46497194 46497507 + Gm23894 misc_RNA misc_RNA MGP_NODShiLtJ_T0098186.1 MGP_NODShiLtJ_G0036598.1 mouse_genomes_project 18 81499474 81499614 - Gm23119 scaRNA scaRNA MGP_NODShiLtJ_T0013196.1 MGP_NODShiLtJ_G0011304.1 mouse_genomes_project 18 10323345 10323776 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100274.1 MGP_NODShiLtJ_G0038668.1 mouse_genomes_project 18 7123102 7123230 + Gm22765 snoRNA snoRNA MGP_NODShiLtJ_T0048848.1 MGP_NODShiLtJ_G0024040.1 mouse_genomes_project 18 33061774 33095141 - MGP_NODShiLtJ_P0048848 protein_coding protein_coding MGP_NODShiLtJ_T0049415.1 MGP_NODShiLtJ_G0024279.1 mouse_genomes_project 18 62175569 62186506 + MGP_NODShiLtJ_P0049415 Ctxn3 protein_coding protein_coding MGP_NODShiLtJ_T0013233.1 MGP_NODShiLtJ_G0011341.1 mouse_genomes_project 18 60361085 60362063 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048905.1 MGP_NODShiLtJ_G0024070.1 mouse_genomes_project 18 36241037 36257259 - MGP_NODShiLtJ_P0048905 Nme5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048906.1 MGP_NODShiLtJ_G0024070.1 mouse_genomes_project 18 36241039 36257274 - MGP_NODShiLtJ_P0048906 Nme5 protein_coding protein_coding MGP_NODShiLtJ_T0048907.1 MGP_NODShiLtJ_G0024070.1 mouse_genomes_project 18 36241087 36257246 - MGP_NODShiLtJ_P0048907 Nme5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048908.1 MGP_NODShiLtJ_G0024070.1 mouse_genomes_project 18 36245458 36257242 - MGP_NODShiLtJ_P0048908 Nme5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049143.1 MGP_NODShiLtJ_G0024180.1 mouse_genomes_project 18 39846840 39929365 + MGP_NODShiLtJ_P0049143 Pcdhga12 protein_coding protein_coding MGP_NODShiLtJ_T0049144.1 MGP_NODShiLtJ_G0024180.1 mouse_genomes_project 18 39847041 39853517 + Pcdhga12 protein_coding retained_intron MGP_NODShiLtJ_T0100279.1 MGP_NODShiLtJ_G0038673.1 mouse_genomes_project 18 23355903 23356029 + Gm22495 snoRNA snoRNA MGP_NODShiLtJ_T0010155.1 MGP_NODShiLtJ_G0008288.1 mouse_genomes_project 18 60517995 60518084 - Gm23335 miRNA miRNA MGP_NODShiLtJ_T0013231.1 MGP_NODShiLtJ_G0011339.1 mouse_genomes_project 18 58343404 58344396 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013218.1 MGP_NODShiLtJ_G0011326.1 mouse_genomes_project 18 40941971 40942823 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0000984.1 MGP_NODShiLtJ_G0000910.1 mouse_genomes_project 18 59615799 59616011 + TEC TEC MGP_NODShiLtJ_T0049113.1 MGP_NODShiLtJ_G0024158.1 mouse_genomes_project 18 39574929 39579209 + MGP_NODShiLtJ_P0049113 Pcdhb20 protein_coding protein_coding MGP_NODShiLtJ_T0048863.1 MGP_NODShiLtJ_G0024052.1 mouse_genomes_project 18 33629109 33647052 - MGP_NODShiLtJ_P0048863 Proc protein_coding protein_coding MGP_NODShiLtJ_T0099049.1 MGP_NODShiLtJ_G0037443.1 mouse_genomes_project 18 70181225 70181287 + Gm23016 snRNA snRNA MGP_NODShiLtJ_T0010173.1 MGP_NODShiLtJ_G0008306.1 mouse_genomes_project 18 74909217 74909292 - Mir145b miRNA miRNA MGP_NODShiLtJ_T0049163.1 MGP_NODShiLtJ_G0024185.1 mouse_genomes_project 18 40024459 40034156 - Hdac3 protein_coding retained_intron MGP_NODShiLtJ_T0049164.1 MGP_NODShiLtJ_G0024185.1 mouse_genomes_project 18 40025587 40032675 - Hdac3 protein_coding retained_intron MGP_NODShiLtJ_T0049165.1 MGP_NODShiLtJ_G0024185.1 mouse_genomes_project 18 40025587 40043379 - MGP_NODShiLtJ_P0049165 Hdac3 protein_coding protein_coding MGP_NODShiLtJ_T0049166.1 MGP_NODShiLtJ_G0024185.1 mouse_genomes_project 18 40025593 40043322 - Hdac3 protein_coding processed_transcript MGP_NODShiLtJ_T0100283.1 MGP_NODShiLtJ_G0038677.1 mouse_genomes_project 18 32928551 32928684 - Gm25396 snoRNA snoRNA MGP_NODShiLtJ_T0011351.1 MGP_NODShiLtJ_G0009484.1 mouse_genomes_project 18 60538268 60538574 - Gm22484 misc_RNA misc_RNA MGP_NODShiLtJ_T0048614.1 MGP_NODShiLtJ_G0023952.1 mouse_genomes_project 18 3285930 3329592 - MGP_NODShiLtJ_P0048614 Kif5b protein_coding protein_coding MGP_NODShiLtJ_T0048615.1 MGP_NODShiLtJ_G0023952.1 mouse_genomes_project 18 3289496 3301757 - Kif5b protein_coding retained_intron MGP_NODShiLtJ_T0048616.1 MGP_NODShiLtJ_G0023952.1 mouse_genomes_project 18 3300662 3311259 - Kif5b protein_coding retained_intron MGP_NODShiLtJ_T0048617.1 MGP_NODShiLtJ_G0023952.1 mouse_genomes_project 18 3301785 3329539 - MGP_NODShiLtJ_P0048617 Kif5b protein_coding protein_coding MGP_NODShiLtJ_T0048618.1 MGP_NODShiLtJ_G0023952.1 mouse_genomes_project 18 3308072 3310250 - Kif5b protein_coding retained_intron MGP_NODShiLtJ_T0048619.1 MGP_NODShiLtJ_G0023952.1 mouse_genomes_project 18 3329382 3330243 - Kif5b protein_coding processed_transcript MGP_NODShiLtJ_T0049433.1 MGP_NODShiLtJ_G0024288.1 mouse_genomes_project 18 65279449 65327165 + MGP_NODShiLtJ_P0049433 Gm4951 protein_coding protein_coding MGP_NODShiLtJ_T0049249.1 MGP_NODShiLtJ_G0024209.1 mouse_genomes_project 18 44871789 44952356 + MGP_NODShiLtJ_P0049249 Rbm27 protein_coding protein_coding MGP_NODShiLtJ_T0049250.1 MGP_NODShiLtJ_G0024209.1 mouse_genomes_project 18 44871789 44952356 + MGP_NODShiLtJ_P0049250 Rbm27 protein_coding protein_coding MGP_NODShiLtJ_T0049284.1 MGP_NODShiLtJ_G0024229.1 mouse_genomes_project 18 47153944 47180319 + MGP_NODShiLtJ_P0049284 Myot protein_coding protein_coding MGP_NODShiLtJ_T0049285.1 MGP_NODShiLtJ_G0024229.1 mouse_genomes_project 18 47153944 47180319 + MGP_NODShiLtJ_P0049285 Myot protein_coding protein_coding MGP_NODShiLtJ_T0048825.1 MGP_NODShiLtJ_G0024033.1 mouse_genomes_project 18 25042531 25523193 + MGP_NODShiLtJ_P0048825 Fhod3 protein_coding protein_coding MGP_NODShiLtJ_T0017466.1 MGP_NODShiLtJ_G0015228.1 mouse_genomes_project 18 37336902 37341848 + Snhg4 processed_transcript lincRNA MGP_NODShiLtJ_T0017467.1 MGP_NODShiLtJ_G0015228.1 mouse_genomes_project 18 37336941 37338296 + Snhg4 processed_transcript retained_intron MGP_NODShiLtJ_T0017468.1 MGP_NODShiLtJ_G0015228.1 mouse_genomes_project 18 37336943 37340762 + Snhg4 processed_transcript retained_intron MGP_NODShiLtJ_T0017469.1 MGP_NODShiLtJ_G0015228.1 mouse_genomes_project 18 37336953 37339496 + Snhg4 processed_transcript retained_intron MGP_NODShiLtJ_T0017470.1 MGP_NODShiLtJ_G0015228.1 mouse_genomes_project 18 37339670 37340928 + Snhg4 processed_transcript retained_intron MGP_NODShiLtJ_T0048757.1 MGP_NODShiLtJ_G0024004.1 mouse_genomes_project 18 20252335 20293909 + MGP_NODShiLtJ_P0048757 Dsg4 protein_coding protein_coding MGP_NODShiLtJ_T0013212.1 MGP_NODShiLtJ_G0011320.1 mouse_genomes_project 18 38612996 38613967 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049520.1 MGP_NODShiLtJ_G0024321.1 mouse_genomes_project 18 67853047 67856899 - MGP_NODShiLtJ_P0049520 Spink7 protein_coding protein_coding MGP_NODShiLtJ_T0006962.1 MGP_NODShiLtJ_G0005716.1 mouse_genomes_project 18 36492264 36501027 - Gm26538 lincRNA lincRNA MGP_NODShiLtJ_T0049617.1 MGP_NODShiLtJ_G0024354.1 mouse_genomes_project 18 73217860 73233494 + MGP_NODShiLtJ_P0049617 Slmo1 protein_coding protein_coding MGP_NODShiLtJ_T0003762.1 MGP_NODShiLtJ_G0003377.1 mouse_genomes_project 18 41577670 41600958 - Gm15337 antisense antisense MGP_NODShiLtJ_T0049480.1 MGP_NODShiLtJ_G0024303.1 mouse_genomes_project 18 66191293 66234093 + MGP_NODShiLtJ_P0049480 Pdgfrb protein_coding protein_coding MGP_NODShiLtJ_T0049481.1 MGP_NODShiLtJ_G0024303.1 mouse_genomes_project 18 66191343 66234088 + MGP_NODShiLtJ_P0049481 Pdgfrb protein_coding protein_coding MGP_NODShiLtJ_T0049482.1 MGP_NODShiLtJ_G0024303.1 mouse_genomes_project 18 66191357 66234096 + MGP_NODShiLtJ_P0049482 Pdgfrb protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048929.1 MGP_NODShiLtJ_G0024076.1 mouse_genomes_project 18 36426075 36447097 - MGP_NODShiLtJ_P0048929 Cdc25c protein_coding protein_coding MGP_NODShiLtJ_T0048647.1 MGP_NODShiLtJ_G0023960.1 mouse_genomes_project 18 5564345 5565660 - MGP_NODShiLtJ_P0048647 protein_coding protein_coding MGP_NODShiLtJ_T0049191.1 MGP_NODShiLtJ_G0024190.1 mouse_genomes_project 18 40365800 40378071 + MGP_NODShiLtJ_P0049191 0610009O20Rik protein_coding protein_coding MGP_NODShiLtJ_T0100275.1 MGP_NODShiLtJ_G0038669.1 mouse_genomes_project 18 8235620 8235738 - Gm24894 snoRNA snoRNA MGP_NODShiLtJ_T0048826.1 MGP_NODShiLtJ_G0024034.1 mouse_genomes_project 18 25513744 25561984 - MGP_NODShiLtJ_P0048826 Tpgs2 protein_coding protein_coding MGP_NODShiLtJ_T0048827.1 MGP_NODShiLtJ_G0024034.1 mouse_genomes_project 18 25525729 25562297 - MGP_NODShiLtJ_P0048827 Tpgs2 protein_coding protein_coding MGP_NODShiLtJ_T0003768.1 MGP_NODShiLtJ_G0003381.1 mouse_genomes_project 18 61422837 61459940 + Gm15345 antisense antisense MGP_NODShiLtJ_T0006991.1 MGP_NODShiLtJ_G0005739.1 mouse_genomes_project 18 90389293 90404871 + 4930445N18Rik lincRNA lincRNA MGP_NODShiLtJ_T0006992.1 MGP_NODShiLtJ_G0005739.1 mouse_genomes_project 18 90389296 90392562 + 4930445N18Rik lincRNA lincRNA MGP_NODShiLtJ_T0049273.1 MGP_NODShiLtJ_G0024219.1 mouse_genomes_project 18 46514130 46531464 - MGP_NODShiLtJ_P0049273 Gm94 protein_coding protein_coding MGP_NODShiLtJ_T0006972.1 MGP_NODShiLtJ_G0005724.1 mouse_genomes_project 18 59428730 59434986 + Gm26742 lincRNA lincRNA MGP_NODShiLtJ_T0048920.1 MGP_NODShiLtJ_G0024074.1 mouse_genomes_project 18 36315432 36337583 - MGP_NODShiLtJ_P0048920 Cdc23 protein_coding protein_coding MGP_NODShiLtJ_T0048921.1 MGP_NODShiLtJ_G0024074.1 mouse_genomes_project 18 36316164 36337583 - MGP_NODShiLtJ_P0048921 Cdc23 protein_coding protein_coding MGP_NODShiLtJ_T0048922.1 MGP_NODShiLtJ_G0024074.1 mouse_genomes_project 18 36318142 36319095 - Cdc23 protein_coding retained_intron MGP_NODShiLtJ_T0048923.1 MGP_NODShiLtJ_G0024074.1 mouse_genomes_project 18 36320535 36337566 - Cdc23 protein_coding retained_intron MGP_NODShiLtJ_T0048924.1 MGP_NODShiLtJ_G0024074.1 mouse_genomes_project 18 36320538 36321574 - Cdc23 protein_coding retained_intron MGP_NODShiLtJ_T0048925.1 MGP_NODShiLtJ_G0024074.1 mouse_genomes_project 18 36321540 36322353 - Cdc23 protein_coding retained_intron MGP_NODShiLtJ_T0048926.1 MGP_NODShiLtJ_G0024074.1 mouse_genomes_project 18 36332706 36337566 - Cdc23 protein_coding retained_intron MGP_NODShiLtJ_T0048927.1 MGP_NODShiLtJ_G0024074.1 mouse_genomes_project 18 36333550 36337570 - Cdc23 protein_coding retained_intron MGP_NODShiLtJ_T0006973.1 MGP_NODShiLtJ_G0005725.1 mouse_genomes_project 18 59437599 59540186 + Gm4221 lincRNA lincRNA MGP_NODShiLtJ_T0006974.1 MGP_NODShiLtJ_G0005725.1 mouse_genomes_project 18 59514747 59542263 + Gm4221 lincRNA lincRNA MGP_NODShiLtJ_T0049790.1 MGP_NODShiLtJ_G0024398.1 mouse_genomes_project 18 83702273 83753656 + MGP_NODShiLtJ_P0049790 Skor2 protein_coding protein_coding MGP_NODShiLtJ_T0049333.1 MGP_NODShiLtJ_G0024248.1 mouse_genomes_project 18 53282474 53364001 - MGP_NODShiLtJ_P0049333 Dtwd2 protein_coding protein_coding MGP_NODShiLtJ_T0049334.1 MGP_NODShiLtJ_G0024248.1 mouse_genomes_project 18 53282913 53364001 - MGP_NODShiLtJ_P0049334 Dtwd2 protein_coding protein_coding MGP_NODShiLtJ_T0049335.1 MGP_NODShiLtJ_G0024248.1 mouse_genomes_project 18 53284496 53323724 - Dtwd2 protein_coding processed_transcript MGP_NODShiLtJ_T0049203.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 40758562 40807769 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049204.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 40758625 40960538 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049205.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 40786571 40804780 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049206.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 40840239 40947421 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049207.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 40840239 41299343 + MGP_NODShiLtJ_P0049207 Arhgap26 protein_coding protein_coding MGP_NODShiLtJ_T0049215.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41073142 41155165 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049216.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41073401 41117897 + MGP_NODShiLtJ_P0049216 Arhgap26 protein_coding protein_coding MGP_NODShiLtJ_T0049217.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41139136 41154827 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049218.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41178917 41289004 + Arhgap26 protein_coding retained_intron MGP_NODShiLtJ_T0049219.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41178917 41586868 + MGP_NODShiLtJ_P0049219 Arhgap26 protein_coding protein_coding MGP_NODShiLtJ_T0049220.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41179248 41581796 + MGP_NODShiLtJ_P0049220 Arhgap26 protein_coding protein_coding MGP_NODShiLtJ_T0049221.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41288165 41324308 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049222.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41430289 41583134 + MGP_NODShiLtJ_P0049222 Arhgap26 protein_coding protein_coding MGP_NODShiLtJ_T0049223.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41491346 41586868 + MGP_NODShiLtJ_P0049223 Arhgap26 protein_coding protein_coding MGP_NODShiLtJ_T0049224.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41496204 41512138 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049225.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41501546 41581763 + MGP_NODShiLtJ_P0049225 Arhgap26 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049226.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41501546 41571557 + MGP_NODShiLtJ_P0049226 Arhgap26 protein_coding protein_coding MGP_NODShiLtJ_T0049227.1 MGP_NODShiLtJ_G0024196.1 mouse_genomes_project 18 41573207 41577689 + Arhgap26 protein_coding processed_transcript MGP_NODShiLtJ_T0049317.1 MGP_NODShiLtJ_G0024242.1 mouse_genomes_project 18 49800400 49809563 - MGP_NODShiLtJ_P0049317 Atg12 protein_coding protein_coding MGP_NODShiLtJ_T0048996.1 MGP_NODShiLtJ_G0024099.1 mouse_genomes_project 18 37570790 37606492 + MGP_NODShiLtJ_P0048996 Ube2d2a protein_coding protein_coding MGP_NODShiLtJ_T0048997.1 MGP_NODShiLtJ_G0024099.1 mouse_genomes_project 18 37570833 37606483 + MGP_NODShiLtJ_P0048997 Ube2d2a protein_coding protein_coding MGP_NODShiLtJ_T0006955.1 MGP_NODShiLtJ_G0005711.1 mouse_genomes_project 18 33883474 33903339 - A830052D11Rik lincRNA lincRNA MGP_NODShiLtJ_T0049090.1 MGP_NODShiLtJ_G0024138.1 mouse_genomes_project 18 39175016 39218915 + MGP_NODShiLtJ_P0049090 Pcdha8 protein_coding protein_coding MGP_NODShiLtJ_T0000983.1 MGP_NODShiLtJ_G0000909.1 mouse_genomes_project 18 49184104 49184815 + TEC TEC MGP_NODShiLtJ_T0049414.1 MGP_NODShiLtJ_G0024278.1 mouse_genomes_project 18 62050134 62094638 + MGP_NODShiLtJ_P0049414 Prrc1 protein_coding protein_coding MGP_NODShiLtJ_T0049320.1 MGP_NODShiLtJ_G0024245.1 mouse_genomes_project 18 50022744 50032131 + MGP_NODShiLtJ_P0049320 Arl14epl protein_coding protein_coding MGP_NODShiLtJ_T0048651.1 MGP_NODShiLtJ_G0023964.1 mouse_genomes_project 18 7124312 7129380 - MGP_NODShiLtJ_P0048651 Cetn1 protein_coding protein_coding MGP_NODShiLtJ_T0049269.1 MGP_NODShiLtJ_G0024217.1 mouse_genomes_project 18 46462240 46471409 - MGP_NODShiLtJ_P0049269 Spink1 protein_coding protein_coding MGP_NODShiLtJ_T0049409.1 MGP_NODShiLtJ_G0024276.1 mouse_genomes_project 18 61623504 61644532 - MGP_NODShiLtJ_P0049409 C330018D20Rik protein_coding protein_coding MGP_NODShiLtJ_T0049410.1 MGP_NODShiLtJ_G0024276.1 mouse_genomes_project 18 61625285 61644518 - MGP_NODShiLtJ_P0049410 C330018D20Rik protein_coding protein_coding MGP_NODShiLtJ_T0049411.1 MGP_NODShiLtJ_G0024276.1 mouse_genomes_project 18 61636118 61644410 - C330018D20Rik protein_coding processed_transcript MGP_NODShiLtJ_T0049537.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68309896 68732910 - MGP_NODShiLtJ_P0049537 Piezo2 protein_coding protein_coding MGP_NODShiLtJ_T0049538.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68309899 68339979 - MGP_NODShiLtJ_P0049538 Piezo2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049539.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68311182 68574162 - MGP_NODShiLtJ_P0049539 Piezo2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049540.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68327441 68337650 - Piezo2 protein_coding retained_intron MGP_NODShiLtJ_T0049541.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68327888 68342665 - Piezo2 protein_coding retained_intron MGP_NODShiLtJ_T0049542.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68364484 68732184 - MGP_NODShiLtJ_P0049542 Piezo2 protein_coding protein_coding MGP_NODShiLtJ_T0049543.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68385489 68466448 - MGP_NODShiLtJ_P0049543 Piezo2 protein_coding protein_coding MGP_NODShiLtJ_T0049544.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68427728 68502290 - MGP_NODShiLtJ_P0049544 Piezo2 protein_coding protein_coding MGP_NODShiLtJ_T0049545.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68427778 68732910 - MGP_NODShiLtJ_P0049545 Piezo2 protein_coding protein_coding MGP_NODShiLtJ_T0049546.1 MGP_NODShiLtJ_G0024327.1 mouse_genomes_project 18 68441805 68732896 - Piezo2 protein_coding retained_intron MGP_NODShiLtJ_T0049288.1 MGP_NODShiLtJ_G0024231.1 mouse_genomes_project 18 47252470 47664613 - MGP_NODShiLtJ_P0049288 Mcc protein_coding protein_coding MGP_NODShiLtJ_T0049289.1 MGP_NODShiLtJ_G0024231.1 mouse_genomes_project 18 47257400 47508266 - MGP_NODShiLtJ_P0049289 Mcc protein_coding protein_coding MGP_NODShiLtJ_T0049290.1 MGP_NODShiLtJ_G0024231.1 mouse_genomes_project 18 47342800 47345464 - Mcc protein_coding retained_intron MGP_NODShiLtJ_T0049291.1 MGP_NODShiLtJ_G0024231.1 mouse_genomes_project 18 47504559 47508284 - Mcc protein_coding retained_intron MGP_NODShiLtJ_T0049292.1 MGP_NODShiLtJ_G0024231.1 mouse_genomes_project 18 47555862 47572542 - Mcc protein_coding processed_transcript MGP_NODShiLtJ_T0049192.1 MGP_NODShiLtJ_G0024191.1 mouse_genomes_project 18 40383304 40402699 - MGP_NODShiLtJ_P0049192 Pcdh12 protein_coding protein_coding MGP_NODShiLtJ_T0049193.1 MGP_NODShiLtJ_G0024191.1 mouse_genomes_project 18 40384422 40396577 - Pcdh12 protein_coding retained_intron MGP_NODShiLtJ_T0049194.1 MGP_NODShiLtJ_G0024191.1 mouse_genomes_project 18 40399383 40403028 - Pcdh12 protein_coding retained_intron MGP_NODShiLtJ_T0048565.1 MGP_NODShiLtJ_G0023943.1 mouse_genomes_project 18 364607 373103 + MGP_NODShiLtJ_P0048565 Bambi protein_coding protein_coding MGP_NODShiLtJ_T0006941.1 MGP_NODShiLtJ_G0005701.1 mouse_genomes_project 18 2165312 2168164 - Gm26682 lincRNA lincRNA MGP_NODShiLtJ_T0049308.1 MGP_NODShiLtJ_G0024237.1 mouse_genomes_project 18 49517252 49544084 - MGP_NODShiLtJ_P0049308 Fem1c protein_coding protein_coding MGP_NODShiLtJ_T0049286.1 MGP_NODShiLtJ_G0024230.1 mouse_genomes_project 18 47202084 47221587 + MGP_NODShiLtJ_P0049286 Dcp2 protein_coding protein_coding MGP_NODShiLtJ_T0049287.1 MGP_NODShiLtJ_G0024230.1 mouse_genomes_project 18 47202109 47252380 + MGP_NODShiLtJ_P0049287 Dcp2 protein_coding protein_coding MGP_NODShiLtJ_T0049132.1 MGP_NODShiLtJ_G0024172.1 mouse_genomes_project 18 39800367 39929362 + MGP_NODShiLtJ_P0049132 Pcdhgb4 protein_coding protein_coding MGP_NODShiLtJ_T0049133.1 MGP_NODShiLtJ_G0024172.1 mouse_genomes_project 18 39800381 39809359 + Pcdhgb4 protein_coding processed_transcript MGP_NODShiLtJ_T0003773.1 MGP_NODShiLtJ_G0003384.1 mouse_genomes_project 18 69558483 69685291 - St8sia3os antisense antisense MGP_NODShiLtJ_T0003774.1 MGP_NODShiLtJ_G0003384.1 mouse_genomes_project 18 69603490 69685291 - St8sia3os antisense antisense MGP_NODShiLtJ_T0003775.1 MGP_NODShiLtJ_G0003384.1 mouse_genomes_project 18 69676779 69685282 - St8sia3os antisense antisense MGP_NODShiLtJ_T0003776.1 MGP_NODShiLtJ_G0003384.1 mouse_genomes_project 18 69683585 69685268 - St8sia3os antisense antisense MGP_NODShiLtJ_T0049237.1 MGP_NODShiLtJ_G0024200.1 mouse_genomes_project 18 42479372 42496738 - MGP_NODShiLtJ_P0049237 Yipf5 protein_coding protein_coding MGP_NODShiLtJ_T0048948.1 MGP_NODShiLtJ_G0024088.1 mouse_genomes_project 18 37336935 37356169 + MGP_NODShiLtJ_P0048948 Gm28285 protein_coding protein_coding MGP_NODShiLtJ_T0048949.1 MGP_NODShiLtJ_G0024088.1 mouse_genomes_project 18 37336939 37365512 + MGP_NODShiLtJ_P0048949 Gm28285 protein_coding protein_coding MGP_NODShiLtJ_T0048950.1 MGP_NODShiLtJ_G0024088.1 mouse_genomes_project 18 37336943 37343008 + Gm28285 protein_coding processed_transcript MGP_NODShiLtJ_T0048951.1 MGP_NODShiLtJ_G0024088.1 mouse_genomes_project 18 37336943 37355869 + Gm28285 protein_coding processed_transcript MGP_NODShiLtJ_T0048952.1 MGP_NODShiLtJ_G0024088.1 mouse_genomes_project 18 37336944 37356092 + MGP_NODShiLtJ_P0048952 Gm28285 protein_coding protein_coding MGP_NODShiLtJ_T0048953.1 MGP_NODShiLtJ_G0024088.1 mouse_genomes_project 18 37336953 37368182 + MGP_NODShiLtJ_P0048953 Gm28285 protein_coding protein_coding MGP_NODShiLtJ_T0048954.1 MGP_NODShiLtJ_G0024088.1 mouse_genomes_project 18 37336969 37355839 + Gm28285 protein_coding processed_transcript MGP_NODShiLtJ_T0049939.1 MGP_NODShiLtJ_G0024444.1 mouse_genomes_project 18 94777122 94784296 + MGP_NODShiLtJ_P0049939 Cbln2 protein_coding protein_coding MGP_NODShiLtJ_T0049940.1 MGP_NODShiLtJ_G0024444.1 mouse_genomes_project 18 94777532 94783602 + MGP_NODShiLtJ_P0049940 Cbln2 protein_coding protein_coding MGP_NODShiLtJ_T0049941.1 MGP_NODShiLtJ_G0024444.1 mouse_genomes_project 18 94778077 94784294 + MGP_NODShiLtJ_P0049941 Cbln2 protein_coding protein_coding MGP_NODShiLtJ_T0049942.1 MGP_NODShiLtJ_G0024444.1 mouse_genomes_project 18 94779060 94784296 + MGP_NODShiLtJ_P0049942 Cbln2 protein_coding protein_coding MGP_NODShiLtJ_T0049832.1 MGP_NODShiLtJ_G0024409.1 mouse_genomes_project 18 84740914 84750109 + MGP_NODShiLtJ_P0049832 Atp5a1 protein_coding protein_coding MGP_NODShiLtJ_T0049833.1 MGP_NODShiLtJ_G0024409.1 mouse_genomes_project 18 84741141 84750106 + MGP_NODShiLtJ_P0049833 Atp5a1 protein_coding protein_coding MGP_NODShiLtJ_T0049834.1 MGP_NODShiLtJ_G0024409.1 mouse_genomes_project 18 84741177 84749895 + MGP_NODShiLtJ_P0049834 Atp5a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049835.1 MGP_NODShiLtJ_G0024409.1 mouse_genomes_project 18 84746194 84748339 + Atp5a1 protein_coding retained_intron MGP_NODShiLtJ_T0049836.1 MGP_NODShiLtJ_G0024409.1 mouse_genomes_project 18 84747071 84749129 + Atp5a1 protein_coding retained_intron MGP_NODShiLtJ_T0049704.1 MGP_NODShiLtJ_G0024369.1 mouse_genomes_project 18 75899663 75919290 + Ccdc68 protein_coding processed_transcript MGP_NODShiLtJ_T0049705.1 MGP_NODShiLtJ_G0024369.1 mouse_genomes_project 18 75899703 75951109 + MGP_NODShiLtJ_P0049705 Ccdc68 protein_coding protein_coding MGP_NODShiLtJ_T0049706.1 MGP_NODShiLtJ_G0024369.1 mouse_genomes_project 18 75899807 75913170 + Ccdc68 protein_coding processed_transcript MGP_NODShiLtJ_T0049707.1 MGP_NODShiLtJ_G0024369.1 mouse_genomes_project 18 75899813 75951109 + MGP_NODShiLtJ_P0049707 Ccdc68 protein_coding protein_coding MGP_NODShiLtJ_T0049632.1 MGP_NODShiLtJ_G0024362.1 mouse_genomes_project 18 73737732 74071366 + MGP_NODShiLtJ_P0049632 Ldlrad4 protein_coding protein_coding MGP_NODShiLtJ_T0049137.1 MGP_NODShiLtJ_G0024175.1 mouse_genomes_project 18 39816801 39929362 + MGP_NODShiLtJ_P0049137 Pcdhga9 protein_coding protein_coding MGP_NODShiLtJ_T0049138.1 MGP_NODShiLtJ_G0024175.1 mouse_genomes_project 18 39817234 39820275 + Pcdhga9 protein_coding retained_intron MGP_NODShiLtJ_T0049760.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81145089 81335982 + MGP_NODShiLtJ_P0049760 Myo5b protein_coding protein_coding MGP_NODShiLtJ_T0049761.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81145117 81220881 + Myo5b protein_coding processed_transcript MGP_NODShiLtJ_T0049762.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81146692 81492373 + MGP_NODShiLtJ_P0049762 Myo5b protein_coding protein_coding MGP_NODShiLtJ_T0049763.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81146760 81385814 + Myo5b protein_coding processed_transcript MGP_NODShiLtJ_T0049764.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81146762 81491685 + MGP_NODShiLtJ_P0049764 Myo5b protein_coding protein_coding MGP_NODShiLtJ_T0049765.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81353263 81365030 + Myo5b protein_coding processed_transcript MGP_NODShiLtJ_T0049766.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81435171 81444739 + Myo5b protein_coding processed_transcript MGP_NODShiLtJ_T0049767.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81441282 81444732 + MGP_NODShiLtJ_P0049767 Myo5b protein_coding protein_coding MGP_NODShiLtJ_T0049768.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81442452 81444730 + Myo5b protein_coding retained_intron MGP_NODShiLtJ_T0049769.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81443241 81450121 + Myo5b protein_coding processed_transcript MGP_NODShiLtJ_T0049770.1 MGP_NODShiLtJ_G0024388.1 mouse_genomes_project 18 81461391 81492357 + Myo5b protein_coding retained_intron MGP_NODShiLtJ_T0049155.1 MGP_NODShiLtJ_G0024184.1 mouse_genomes_project 18 39931092 40024093 - MGP_NODShiLtJ_P0049155 Diaph1 protein_coding protein_coding MGP_NODShiLtJ_T0049156.1 MGP_NODShiLtJ_G0024184.1 mouse_genomes_project 18 39931094 40023998 - MGP_NODShiLtJ_P0049156 Diaph1 protein_coding protein_coding MGP_NODShiLtJ_T0049157.1 MGP_NODShiLtJ_G0024184.1 mouse_genomes_project 18 39931094 40024040 - MGP_NODShiLtJ_P0049157 Diaph1 protein_coding protein_coding MGP_NODShiLtJ_T0049158.1 MGP_NODShiLtJ_G0024184.1 mouse_genomes_project 18 39931096 39995198 - MGP_NODShiLtJ_P0049158 Diaph1 protein_coding protein_coding MGP_NODShiLtJ_T0049159.1 MGP_NODShiLtJ_G0024184.1 mouse_genomes_project 18 39932315 40024028 - MGP_NODShiLtJ_P0049159 Diaph1 protein_coding protein_coding MGP_NODShiLtJ_T0049160.1 MGP_NODShiLtJ_G0024184.1 mouse_genomes_project 18 39932591 39940874 - Diaph1 protein_coding processed_transcript MGP_NODShiLtJ_T0049161.1 MGP_NODShiLtJ_G0024184.1 mouse_genomes_project 18 39942946 39943606 - Diaph1 protein_coding retained_intron MGP_NODShiLtJ_T0049162.1 MGP_NODShiLtJ_G0024184.1 mouse_genomes_project 18 39985113 39986902 - Diaph1 protein_coding retained_intron MGP_NODShiLtJ_T0049079.1 MGP_NODShiLtJ_G0024131.1 mouse_genomes_project 18 38970104 39920811 + MGP_NODShiLtJ_P0049079 Gm37388 protein_coding protein_coding MGP_NODShiLtJ_T0100294.1 MGP_NODShiLtJ_G0038688.1 mouse_genomes_project 18 59548401 59548494 - Gm24183 snoRNA snoRNA MGP_NODShiLtJ_T0011355.1 MGP_NODShiLtJ_G0009488.1 mouse_genomes_project 18 75729555 75729665 - Gm22508 misc_RNA misc_RNA MGP_NODShiLtJ_T0097989.1 MGP_NODShiLtJ_G0036401.1 mouse_genomes_project 18 75081804 75081938 - Gm23536 rRNA rRNA MGP_NODShiLtJ_T0049490.1 MGP_NODShiLtJ_G0024307.1 mouse_genomes_project 18 66375428 66454580 + MGP_NODShiLtJ_P0049490 Pde6a protein_coding protein_coding MGP_NODShiLtJ_T0049491.1 MGP_NODShiLtJ_G0024307.1 mouse_genomes_project 18 66437511 66454580 + MGP_NODShiLtJ_P0049491 Pde6a protein_coding protein_coding MGP_NODShiLtJ_T0048870.1 MGP_NODShiLtJ_G0024056.1 mouse_genomes_project 18 34060474 34095950 - MGP_NODShiLtJ_P0048870 Gypc protein_coding protein_coding MGP_NODShiLtJ_T0048871.1 MGP_NODShiLtJ_G0024056.1 mouse_genomes_project 18 34060477 34095896 - MGP_NODShiLtJ_P0048871 Gypc protein_coding protein_coding MGP_NODShiLtJ_T0048872.1 MGP_NODShiLtJ_G0024056.1 mouse_genomes_project 18 34061944 34068715 - MGP_NODShiLtJ_P0048872 Gypc protein_coding protein_coding MGP_NODShiLtJ_T0100300.1 MGP_NODShiLtJ_G0038694.1 mouse_genomes_project 18 81641799 81641920 - Gm24559 snoRNA snoRNA MGP_NODShiLtJ_T0049270.1 MGP_NODShiLtJ_G0024218.1 mouse_genomes_project 18 46500337 46503448 + MGP_NODShiLtJ_P0049270 Scgb3a2 protein_coding protein_coding MGP_NODShiLtJ_T0049271.1 MGP_NODShiLtJ_G0024218.1 mouse_genomes_project 18 46500375 46503448 + MGP_NODShiLtJ_P0049271 Scgb3a2 protein_coding protein_coding MGP_NODShiLtJ_T0049272.1 MGP_NODShiLtJ_G0024218.1 mouse_genomes_project 18 46500375 46503448 + MGP_NODShiLtJ_P0049272 Scgb3a2 protein_coding protein_coding MGP_NODShiLtJ_T0049239.1 MGP_NODShiLtJ_G0024202.1 mouse_genomes_project 18 42539429 42841072 + MGP_NODShiLtJ_P0049239 Kctd16 protein_coding protein_coding MGP_NODShiLtJ_T0003784.1 MGP_NODShiLtJ_G0003390.1 mouse_genomes_project 18 92611851 92612965 - Gm16146 antisense antisense MGP_NODShiLtJ_T0003757.1 MGP_NODShiLtJ_G0003372.1 mouse_genomes_project 18 39793903 39806125 - Gm37165 antisense antisense MGP_NODShiLtJ_T0049755.1 MGP_NODShiLtJ_G0024386.1 mouse_genomes_project 18 80934910 80944831 + MGP_NODShiLtJ_P0049755 Mbd1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049756.1 MGP_NODShiLtJ_G0024386.1 mouse_genomes_project 18 80935520 80949961 + MGP_NODShiLtJ_P0049756 Mbd1 protein_coding protein_coding MGP_NODShiLtJ_T0049145.1 MGP_NODShiLtJ_G0024181.1 mouse_genomes_project 18 39889597 39892977 + Pcdhgc3 protein_coding retained_intron MGP_NODShiLtJ_T0049146.1 MGP_NODShiLtJ_G0024181.1 mouse_genomes_project 18 39889643 39929365 + MGP_NODShiLtJ_P0049146 Pcdhgc3 protein_coding protein_coding MGP_NODShiLtJ_T0049147.1 MGP_NODShiLtJ_G0024181.1 mouse_genomes_project 18 39889649 39929365 + MGP_NODShiLtJ_P0049147 Pcdhgc3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049151.1 MGP_NODShiLtJ_G0024183.1 mouse_genomes_project 18 39905884 39929365 + MGP_NODShiLtJ_P0049151 Pcdhgc5 protein_coding protein_coding MGP_NODShiLtJ_T0049152.1 MGP_NODShiLtJ_G0024183.1 mouse_genomes_project 18 39905923 39927541 + MGP_NODShiLtJ_P0049152 Pcdhgc5 protein_coding protein_coding MGP_NODShiLtJ_T0049153.1 MGP_NODShiLtJ_G0024183.1 mouse_genomes_project 18 39905937 39927690 + MGP_NODShiLtJ_P0049153 Pcdhgc5 protein_coding protein_coding MGP_NODShiLtJ_T0049154.1 MGP_NODShiLtJ_G0024183.1 mouse_genomes_project 18 39906025 39927654 + Pcdhgc5 protein_coding retained_intron MGP_NODShiLtJ_T0049741.1 MGP_NODShiLtJ_G0024380.1 mouse_genomes_project 18 80399739 80448835 - MGP_NODShiLtJ_P0049741 Me2 protein_coding protein_coding MGP_NODShiLtJ_T0011340.1 MGP_NODShiLtJ_G0009473.1 mouse_genomes_project 18 25095980 25096257 + Gm24294 misc_RNA misc_RNA MGP_NODShiLtJ_T0003769.1 MGP_NODShiLtJ_G0003382.1 mouse_genomes_project 18 66882610 66883960 - Gm38165 antisense antisense MGP_NODShiLtJ_T0011345.1 MGP_NODShiLtJ_G0009478.1 mouse_genomes_project 18 40751404 40751523 + Gm27804 misc_RNA misc_RNA MGP_NODShiLtJ_T0049139.1 MGP_NODShiLtJ_G0024176.1 mouse_genomes_project 18 39821967 39929365 + MGP_NODShiLtJ_P0049139 Pcdhgb6 protein_coding protein_coding MGP_NODShiLtJ_T0049336.1 MGP_NODShiLtJ_G0024249.1 mouse_genomes_project 18 53449376 53617850 + MGP_NODShiLtJ_P0049336 protein_coding protein_coding MGP_NODShiLtJ_T0049337.1 MGP_NODShiLtJ_G0024249.1 mouse_genomes_project 18 53449703 53619069 + MGP_NODShiLtJ_P0049337 protein_coding protein_coding MGP_NODShiLtJ_T0049338.1 MGP_NODShiLtJ_G0024249.1 mouse_genomes_project 18 53525218 53616155 + MGP_NODShiLtJ_P0049338 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049339.1 MGP_NODShiLtJ_G0024249.1 mouse_genomes_project 18 53600635 53605776 + protein_coding retained_intron MGP_NODShiLtJ_T0049340.1 MGP_NODShiLtJ_G0024249.1 mouse_genomes_project 18 53608416 53612095 + protein_coding retained_intron MGP_NODShiLtJ_T0100299.1 MGP_NODShiLtJ_G0038693.1 mouse_genomes_project 18 73215354 73215488 + Gm24900 snoRNA snoRNA MGP_NODShiLtJ_T0003758.1 MGP_NODShiLtJ_G0003373.1 mouse_genomes_project 18 39888951 39891156 - BC037039 antisense antisense MGP_NODShiLtJ_T0049492.1 MGP_NODShiLtJ_G0024308.1 mouse_genomes_project 18 66462783 66574620 - MGP_NODShiLtJ_P0049492 Ppargc1b protein_coding protein_coding MGP_NODShiLtJ_T0049493.1 MGP_NODShiLtJ_G0024308.1 mouse_genomes_project 18 66463157 66574589 - MGP_NODShiLtJ_P0049493 Ppargc1b protein_coding protein_coding MGP_NODShiLtJ_T0011335.1 MGP_NODShiLtJ_G0009468.1 mouse_genomes_project 18 14348542 14348843 + Gm22389 misc_RNA misc_RNA MGP_NODShiLtJ_T0013195.1 MGP_NODShiLtJ_G0011303.1 mouse_genomes_project 18 10236979 10238261 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049565.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71119219 71236055 + MGP_NODShiLtJ_P0049565 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049566.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71119371 71166056 + MGP_NODShiLtJ_P0049566 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049567.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71120076 71166045 + MGP_NODShiLtJ_P0049567 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049568.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71120082 71163881 + MGP_NODShiLtJ_P0049568 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049569.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71120731 71167871 + MGP_NODShiLtJ_P0049569 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049570.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71121320 71166192 + MGP_NODShiLtJ_P0049570 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049571.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71121375 71163888 + MGP_NODShiLtJ_P0049571 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049572.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71121499 71235553 + MGP_NODShiLtJ_P0049572 Zfp532 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049573.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71121607 71235552 + MGP_NODShiLtJ_P0049573 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049574.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71121694 71164087 + MGP_NODShiLtJ_P0049574 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049575.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71122019 71235546 + MGP_NODShiLtJ_P0049575 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049576.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71122546 71164053 + MGP_NODShiLtJ_P0049576 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049577.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71123068 71163998 + MGP_NODShiLtJ_P0049577 Zfp532 protein_coding protein_coding MGP_NODShiLtJ_T0049578.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71160285 71167463 + Zfp532 protein_coding retained_intron MGP_NODShiLtJ_T0049579.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71167776 71229986 + Zfp532 protein_coding retained_intron MGP_NODShiLtJ_T0049580.1 MGP_NODShiLtJ_G0024338.1 mouse_genomes_project 18 71190978 71232236 + Zfp532 protein_coding processed_transcript MGP_NODShiLtJ_T0010140.1 MGP_NODShiLtJ_G0008273.1 mouse_genomes_project 18 8489084 8489156 - Mir1a-2 miRNA miRNA MGP_NODShiLtJ_T0048865.1 MGP_NODShiLtJ_G0024054.1 mouse_genomes_project 18 33762965 33792755 + MGP_NODShiLtJ_P0048865 Ercc3 protein_coding protein_coding MGP_NODShiLtJ_T0048866.1 MGP_NODShiLtJ_G0024054.1 mouse_genomes_project 18 33763019 33792755 + Ercc3 protein_coding retained_intron MGP_NODShiLtJ_T0048867.1 MGP_NODShiLtJ_G0024054.1 mouse_genomes_project 18 33779874 33792695 + Ercc3 protein_coding processed_transcript MGP_NODShiLtJ_T0048805.1 MGP_NODShiLtJ_G0024025.1 mouse_genomes_project 18 24386469 24408803 - MGP_NODShiLtJ_P0048805 Ino80c protein_coding protein_coding MGP_NODShiLtJ_T0048806.1 MGP_NODShiLtJ_G0024025.1 mouse_genomes_project 18 24386475 24408955 - MGP_NODShiLtJ_P0048806 Ino80c protein_coding protein_coding MGP_NODShiLtJ_T0048807.1 MGP_NODShiLtJ_G0024025.1 mouse_genomes_project 18 24388092 24408837 - MGP_NODShiLtJ_P0048807 Ino80c protein_coding protein_coding MGP_NODShiLtJ_T0099051.1 MGP_NODShiLtJ_G0037445.1 mouse_genomes_project 18 71467775 71467835 - Gm25150 snRNA snRNA MGP_NODShiLtJ_T0011333.1 MGP_NODShiLtJ_G0009466.1 mouse_genomes_project 18 770048 770371 + Gm24632 misc_RNA misc_RNA MGP_NODShiLtJ_T0010177.1 MGP_NODShiLtJ_G0008310.1 mouse_genomes_project 18 88266700 88266796 - Gm25071 miRNA miRNA MGP_NODShiLtJ_T0048919.1 MGP_NODShiLtJ_G0024073.1 mouse_genomes_project 18 36309499 36317093 + MGP_NODShiLtJ_P0048919 Kif20a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048828.1 MGP_NODShiLtJ_G0024035.1 mouse_genomes_project 18 25562288 25877108 + MGP_NODShiLtJ_P0048828 AW554918 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048829.1 MGP_NODShiLtJ_G0024035.1 mouse_genomes_project 18 25562299 25880699 + MGP_NODShiLtJ_P0048829 AW554918 protein_coding protein_coding MGP_NODShiLtJ_T0048830.1 MGP_NODShiLtJ_G0024035.1 mouse_genomes_project 18 25562303 25584102 + AW554918 protein_coding processed_transcript MGP_NODShiLtJ_T0048831.1 MGP_NODShiLtJ_G0024035.1 mouse_genomes_project 18 25562309 25690133 + AW554918 protein_coding processed_transcript MGP_NODShiLtJ_T0048832.1 MGP_NODShiLtJ_G0024035.1 mouse_genomes_project 18 25562309 25880704 + MGP_NODShiLtJ_P0048832 AW554918 protein_coding protein_coding MGP_NODShiLtJ_T0048833.1 MGP_NODShiLtJ_G0024035.1 mouse_genomes_project 18 25562309 25880704 + MGP_NODShiLtJ_P0048833 AW554918 protein_coding protein_coding MGP_NODShiLtJ_T0048834.1 MGP_NODShiLtJ_G0024035.1 mouse_genomes_project 18 25562312 25877279 + MGP_NODShiLtJ_P0048834 AW554918 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048835.1 MGP_NODShiLtJ_G0024035.1 mouse_genomes_project 18 25626804 25877475 + MGP_NODShiLtJ_P0048835 AW554918 protein_coding protein_coding MGP_NODShiLtJ_T0049052.1 MGP_NODShiLtJ_G0024118.1 mouse_genomes_project 18 38705059 38707599 - Dnd1 protein_coding retained_intron MGP_NODShiLtJ_T0049053.1 MGP_NODShiLtJ_G0024118.1 mouse_genomes_project 18 38705061 38707583 - MGP_NODShiLtJ_P0049053 Dnd1 protein_coding protein_coding MGP_NODShiLtJ_T0049054.1 MGP_NODShiLtJ_G0024118.1 mouse_genomes_project 18 38705063 38707583 - Dnd1 protein_coding retained_intron MGP_NODShiLtJ_T0049936.1 MGP_NODShiLtJ_G0024442.1 mouse_genomes_project 18 92712941 92717175 - MGP_NODShiLtJ_P0049936 Timm21 protein_coding protein_coding MGP_NODShiLtJ_T0003742.1 MGP_NODShiLtJ_G0003360.1 mouse_genomes_project 18 10471894 10475131 - Gm29200 antisense antisense MGP_NODShiLtJ_T0049364.1 MGP_NODShiLtJ_G0024258.1 mouse_genomes_project 18 56706333 56721188 - MGP_NODShiLtJ_P0049364 Lox protein_coding protein_coding MGP_NODShiLtJ_T0049365.1 MGP_NODShiLtJ_G0024258.1 mouse_genomes_project 18 56707502 56721029 - MGP_NODShiLtJ_P0049365 Lox protein_coding protein_coding MGP_NODShiLtJ_T0010156.1 MGP_NODShiLtJ_G0008289.1 mouse_genomes_project 18 60823796 60823981 + Gm25476 miRNA miRNA MGP_NODShiLtJ_T0048998.1 MGP_NODShiLtJ_G0024100.1 mouse_genomes_project 18 37632724 37665591 + MGP_NODShiLtJ_P0048998 Cxxc5 protein_coding protein_coding MGP_NODShiLtJ_T0013214.1 MGP_NODShiLtJ_G0011322.1 mouse_genomes_project 18 39351196 39352460 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010161.1 MGP_NODShiLtJ_G0008294.1 mouse_genomes_project 18 65949438 65949526 + Mir5107 miRNA miRNA MGP_NODShiLtJ_T0011338.1 MGP_NODShiLtJ_G0009471.1 mouse_genomes_project 18 19248487 19248784 + Gm25392 misc_RNA misc_RNA MGP_NODShiLtJ_T0048864.1 MGP_NODShiLtJ_G0024053.1 mouse_genomes_project 18 33671332 33759418 + MGP_NODShiLtJ_P0048864 Map3k2 protein_coding protein_coding MGP_NODShiLtJ_T0049425.1 MGP_NODShiLtJ_G0024286.1 mouse_genomes_project 18 63918415 63936277 + MGP_NODShiLtJ_P0049425 A730017C20Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049426.1 MGP_NODShiLtJ_G0024286.1 mouse_genomes_project 18 63918449 63936277 + MGP_NODShiLtJ_P0049426 A730017C20Rik protein_coding protein_coding MGP_NODShiLtJ_T0049427.1 MGP_NODShiLtJ_G0024286.1 mouse_genomes_project 18 63918629 63936277 + MGP_NODShiLtJ_P0049427 A730017C20Rik protein_coding protein_coding MGP_NODShiLtJ_T0049428.1 MGP_NODShiLtJ_G0024286.1 mouse_genomes_project 18 63918633 63934936 + MGP_NODShiLtJ_P0049428 A730017C20Rik protein_coding protein_coding MGP_NODShiLtJ_T0049429.1 MGP_NODShiLtJ_G0024286.1 mouse_genomes_project 18 63918661 63935139 + MGP_NODShiLtJ_P0049429 A730017C20Rik protein_coding protein_coding MGP_NODShiLtJ_T0049430.1 MGP_NODShiLtJ_G0024286.1 mouse_genomes_project 18 63918677 63933979 + A730017C20Rik protein_coding retained_intron MGP_NODShiLtJ_T0049431.1 MGP_NODShiLtJ_G0024286.1 mouse_genomes_project 18 63918678 63935246 + MGP_NODShiLtJ_P0049431 A730017C20Rik protein_coding protein_coding MGP_NODShiLtJ_T0048730.1 MGP_NODShiLtJ_G0023988.1 mouse_genomes_project 18 11017342 11034193 + MGP_NODShiLtJ_P0048730 Hrh4 protein_coding protein_coding MGP_NODShiLtJ_T0049612.1 MGP_NODShiLtJ_G0024350.1 mouse_genomes_project 18 73022252 73052993 + MGP_NODShiLtJ_P0049612 Impa2 protein_coding protein_coding MGP_NODShiLtJ_T0049184.1 MGP_NODShiLtJ_G0024188.1 mouse_genomes_project 18 40061034 40087198 - MGP_NODShiLtJ_P0049184 Arap3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013198.1 MGP_NODShiLtJ_G0011306.1 mouse_genomes_project 18 10734287 10735082 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006976.1 MGP_NODShiLtJ_G0005727.1 mouse_genomes_project 18 66827155 66835275 + Bvht lincRNA lincRNA MGP_NODShiLtJ_T0006977.1 MGP_NODShiLtJ_G0005727.1 mouse_genomes_project 18 66827266 66835455 + Bvht lincRNA lincRNA MGP_NODShiLtJ_T0048877.1 MGP_NODShiLtJ_G0024060.1 mouse_genomes_project 18 34784644 34802533 - MGP_NODShiLtJ_P0048877 Stard4 protein_coding protein_coding MGP_NODShiLtJ_T0048878.1 MGP_NODShiLtJ_G0024060.1 mouse_genomes_project 18 34788913 34802628 - MGP_NODShiLtJ_P0048878 Stard4 protein_coding protein_coding MGP_NODShiLtJ_T0048879.1 MGP_NODShiLtJ_G0024060.1 mouse_genomes_project 18 34790395 34802683 - Stard4 protein_coding retained_intron MGP_NODShiLtJ_T0048945.1 MGP_NODShiLtJ_G0024085.1 mouse_genomes_project 18 36950482 36957416 - MGP_NODShiLtJ_P0048945 Lrrtm2 protein_coding protein_coding MGP_NODShiLtJ_T0049563.1 MGP_NODShiLtJ_G0024337.1 mouse_genomes_project 18 70944088 70996472 + MGP_NODShiLtJ_P0049563 Malt1 protein_coding protein_coding MGP_NODShiLtJ_T0049564.1 MGP_NODShiLtJ_G0024337.1 mouse_genomes_project 18 70944297 70993954 + MGP_NODShiLtJ_P0049564 Malt1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049124.1 MGP_NODShiLtJ_G0024167.1 mouse_genomes_project 18 39763594 39929365 + MGP_NODShiLtJ_P0049124 Pcdhga4 protein_coding protein_coding MGP_NODShiLtJ_T0049125.1 MGP_NODShiLtJ_G0024167.1 mouse_genomes_project 18 39765268 39766164 + MGP_NODShiLtJ_P0049125 Pcdhga4 protein_coding protein_coding MGP_NODShiLtJ_T0049643.1 MGP_NODShiLtJ_G0024365.1 mouse_genomes_project 18 74172906 74175015 + MGP_NODShiLtJ_P0049643 Mc5r protein_coding protein_coding MGP_NODShiLtJ_T0048788.1 MGP_NODShiLtJ_G0024019.1 mouse_genomes_project 18 23658983 23929505 + MGP_NODShiLtJ_P0048788 Dtna protein_coding protein_coding MGP_NODShiLtJ_T0048789.1 MGP_NODShiLtJ_G0024019.1 mouse_genomes_project 18 23658983 23871779 + MGP_NODShiLtJ_P0048789 Dtna protein_coding protein_coding MGP_NODShiLtJ_T0048790.1 MGP_NODShiLtJ_G0024019.1 mouse_genomes_project 18 23890149 23905580 + MGP_NODShiLtJ_P0048790 Dtna protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049591.1 MGP_NODShiLtJ_G0024341.1 mouse_genomes_project 18 71430208 71444981 + MGP_NODShiLtJ_P0049591 Grp protein_coding protein_coding MGP_NODShiLtJ_T0049592.1 MGP_NODShiLtJ_G0024341.1 mouse_genomes_project 18 71430926 71438644 + MGP_NODShiLtJ_P0049592 Grp protein_coding protein_coding MGP_NODShiLtJ_T0049593.1 MGP_NODShiLtJ_G0024341.1 mouse_genomes_project 18 71430936 71444980 + MGP_NODShiLtJ_P0049593 Grp protein_coding protein_coding MGP_NODShiLtJ_T0017483.1 MGP_NODShiLtJ_G0015232.1 mouse_genomes_project 18 40317840 40341640 + 2010320O07Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099056.1 MGP_NODShiLtJ_G0037450.1 mouse_genomes_project 18 89836222 89836352 - Gm25060 snRNA snRNA MGP_NODShiLtJ_T0049733.1 MGP_NODShiLtJ_G0024377.1 mouse_genomes_project 18 80205083 80224951 + MGP_NODShiLtJ_P0049733 Mex3c protein_coding protein_coding MGP_NODShiLtJ_T0013247.1 MGP_NODShiLtJ_G0011355.1 mouse_genomes_project 18 99431688 99431907 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099058.1 MGP_NODShiLtJ_G0037452.1 mouse_genomes_project 18 92466901 92467057 - Gm25005 snRNA snRNA MGP_NODShiLtJ_T0048708.1 MGP_NODShiLtJ_G0023984.1 mouse_genomes_project 18 10623666 10673803 + Ttc39c protein_coding retained_intron MGP_NODShiLtJ_T0048709.1 MGP_NODShiLtJ_G0023984.1 mouse_genomes_project 18 10624208 10728589 + MGP_NODShiLtJ_P0048709 Ttc39c protein_coding protein_coding MGP_NODShiLtJ_T0048710.1 MGP_NODShiLtJ_G0023984.1 mouse_genomes_project 18 10726530 10728656 + Ttc39c protein_coding retained_intron MGP_NODShiLtJ_T0049318.1 MGP_NODShiLtJ_G0024243.1 mouse_genomes_project 18 49809996 49861704 + MGP_NODShiLtJ_P0049318 Ap3s1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049740.1 MGP_NODShiLtJ_G0024379.1 mouse_genomes_project 18 80362934 80383291 - MGP_NODShiLtJ_P0049740 Elac1 protein_coding protein_coding MGP_NODShiLtJ_T0003777.1 MGP_NODShiLtJ_G0003385.1 mouse_genomes_project 18 75918565 75951234 - 1700061H18Rik antisense antisense MGP_NODShiLtJ_T0003778.1 MGP_NODShiLtJ_G0003385.1 mouse_genomes_project 18 75922184 75951221 - 1700061H18Rik antisense antisense MGP_NODShiLtJ_T0017490.1 MGP_NODShiLtJ_G0015236.1 mouse_genomes_project 18 62215905 62247030 - 1700066O22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017491.1 MGP_NODShiLtJ_G0015236.1 mouse_genomes_project 18 62218644 62247006 - 1700066O22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017493.1 MGP_NODShiLtJ_G0015236.1 mouse_genomes_project 18 62228406 62247017 - 1700066O22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017494.1 MGP_NODShiLtJ_G0015236.1 mouse_genomes_project 18 62228417 62246994 - 1700066O22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017495.1 MGP_NODShiLtJ_G0015236.1 mouse_genomes_project 18 62243713 62247001 - 1700066O22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0049720.1 MGP_NODShiLtJ_G0024374.1 mouse_genomes_project 18 76550605 76570866 - MGP_NODShiLtJ_P0049720 Poli protein_coding protein_coding MGP_NODShiLtJ_T0049721.1 MGP_NODShiLtJ_G0024374.1 mouse_genomes_project 18 76550608 76571348 - MGP_NODShiLtJ_P0049721 Poli protein_coding protein_coding MGP_NODShiLtJ_T0049722.1 MGP_NODShiLtJ_G0024374.1 mouse_genomes_project 18 76550609 76571162 - MGP_NODShiLtJ_P0049722 Poli protein_coding protein_coding MGP_NODShiLtJ_T0049723.1 MGP_NODShiLtJ_G0024374.1 mouse_genomes_project 18 76550610 76570866 - MGP_NODShiLtJ_P0049723 Poli protein_coding protein_coding MGP_NODShiLtJ_T0049724.1 MGP_NODShiLtJ_G0024374.1 mouse_genomes_project 18 76550612 76570996 - MGP_NODShiLtJ_P0049724 Poli protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049849.1 MGP_NODShiLtJ_G0024419.1 mouse_genomes_project 18 87361808 87392696 - MGP_NODShiLtJ_P0049849 Adnp2 protein_coding protein_coding MGP_NODShiLtJ_T0010147.1 MGP_NODShiLtJ_G0008280.1 mouse_genomes_project 18 37340663 37340774 + miRNA miRNA MGP_NODShiLtJ_T0048857.1 MGP_NODShiLtJ_G0024047.1 mouse_genomes_project 18 33411955 33414767 - MGP_NODShiLtJ_P0048857 Sft2d3 protein_coding protein_coding MGP_NODShiLtJ_T0048969.1 MGP_NODShiLtJ_G0024090.1 mouse_genomes_project 18 37387191 37408604 + MGP_NODShiLtJ_P0048969 Paip2 protein_coding protein_coding MGP_NODShiLtJ_T0048970.1 MGP_NODShiLtJ_G0024090.1 mouse_genomes_project 18 37387198 37407768 + MGP_NODShiLtJ_P0048970 Paip2 protein_coding protein_coding MGP_NODShiLtJ_T0048971.1 MGP_NODShiLtJ_G0024090.1 mouse_genomes_project 18 37387215 37407937 + MGP_NODShiLtJ_P0048971 Paip2 protein_coding protein_coding MGP_NODShiLtJ_T0048972.1 MGP_NODShiLtJ_G0024090.1 mouse_genomes_project 18 37387223 37408601 + MGP_NODShiLtJ_P0048972 Paip2 protein_coding protein_coding MGP_NODShiLtJ_T0048973.1 MGP_NODShiLtJ_G0024090.1 mouse_genomes_project 18 37387811 37407813 + MGP_NODShiLtJ_P0048973 Paip2 protein_coding protein_coding MGP_NODShiLtJ_T0048974.1 MGP_NODShiLtJ_G0024090.1 mouse_genomes_project 18 37398872 37403249 + Paip2 protein_coding retained_intron MGP_NODShiLtJ_T0048975.1 MGP_NODShiLtJ_G0024090.1 mouse_genomes_project 18 37399573 37403698 + Paip2 protein_coding retained_intron MGP_NODShiLtJ_T0048931.1 MGP_NODShiLtJ_G0024078.1 mouse_genomes_project 18 36454400 36469246 + MGP_NODShiLtJ_P0048931 Fam53c protein_coding protein_coding MGP_NODShiLtJ_T0048932.1 MGP_NODShiLtJ_G0024078.1 mouse_genomes_project 18 36455050 36469224 + MGP_NODShiLtJ_P0048932 Fam53c protein_coding protein_coding MGP_NODShiLtJ_T0049148.1 MGP_NODShiLtJ_G0024182.1 mouse_genomes_project 18 39899557 39929365 + MGP_NODShiLtJ_P0049148 Pcdhga8 protein_coding protein_coding MGP_NODShiLtJ_T0049149.1 MGP_NODShiLtJ_G0024182.1 mouse_genomes_project 18 39899879 39929365 + MGP_NODShiLtJ_P0049149 Pcdhga8 protein_coding protein_coding MGP_NODShiLtJ_T0049150.1 MGP_NODShiLtJ_G0024182.1 mouse_genomes_project 18 39899934 39903034 + Pcdhga8 protein_coding retained_intron MGP_NODShiLtJ_T0049456.1 MGP_NODShiLtJ_G0024295.1 mouse_genomes_project 18 65810821 65851417 - MGP_NODShiLtJ_P0049456 Ndst1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010134.1 MGP_NODShiLtJ_G0008267.1 mouse_genomes_project 18 3616888 3616971 - Mir1893 miRNA miRNA MGP_NODShiLtJ_T0100282.1 MGP_NODShiLtJ_G0038676.1 mouse_genomes_project 18 31762078 31762190 + Gm22870 snoRNA snoRNA MGP_NODShiLtJ_T0049633.1 MGP_NODShiLtJ_G0024363.1 mouse_genomes_project 18 74076003 74135417 - MGP_NODShiLtJ_P0049633 Fam210a protein_coding protein_coding MGP_NODShiLtJ_T0049634.1 MGP_NODShiLtJ_G0024363.1 mouse_genomes_project 18 74091732 74135286 - MGP_NODShiLtJ_P0049634 Fam210a protein_coding protein_coding MGP_NODShiLtJ_T0049261.1 MGP_NODShiLtJ_G0024214.1 mouse_genomes_project 18 45891334 46018524 + MGP_NODShiLtJ_P0049261 Stk32a protein_coding protein_coding MGP_NODShiLtJ_T0003756.1 MGP_NODShiLtJ_G0003371.1 mouse_genomes_project 18 39739777 39740458 - Gm37118 antisense antisense MGP_NODShiLtJ_T0003755.1 MGP_NODShiLtJ_G0003370.1 mouse_genomes_project 18 39494022 39498809 - Gm37446 antisense antisense MGP_NODShiLtJ_T0049912.1 MGP_NODShiLtJ_G0024434.1 mouse_genomes_project 18 91632881 91711426 - MGP_NODShiLtJ_P0049912 Tshz1 protein_coding protein_coding MGP_NODShiLtJ_T0049913.1 MGP_NODShiLtJ_G0024434.1 mouse_genomes_project 18 91633336 91711412 - Tshz1 protein_coding processed_transcript MGP_NODShiLtJ_T0049100.1 MGP_NODShiLtJ_G0024146.1 mouse_genomes_project 18 39404687 39406281 + MGP_NODShiLtJ_P0049100 Pcdhb8 protein_coding protein_coding MGP_NODShiLtJ_T0049101.1 MGP_NODShiLtJ_G0024146.1 mouse_genomes_project 18 39404837 39408280 + MGP_NODShiLtJ_P0049101 Pcdhb8 protein_coding protein_coding MGP_NODShiLtJ_T0011337.1 MGP_NODShiLtJ_G0009470.1 mouse_genomes_project 18 15698944 15699176 - Gm24015 misc_RNA misc_RNA MGP_NODShiLtJ_T0099055.1 MGP_NODShiLtJ_G0037449.1 mouse_genomes_project 18 88382364 88382493 + Gm25718 snRNA snRNA MGP_NODShiLtJ_T0011339.1 MGP_NODShiLtJ_G0009472.1 mouse_genomes_project 18 21221176 21221286 + Gm24372 misc_RNA misc_RNA MGP_NODShiLtJ_T0049112.1 MGP_NODShiLtJ_G0024157.1 mouse_genomes_project 18 39567031 39574706 + MGP_NODShiLtJ_P0049112 Pcdhb19 protein_coding protein_coding MGP_NODShiLtJ_T0006971.1 MGP_NODShiLtJ_G0005723.1 mouse_genomes_project 18 58840360 58870875 + Redrum lincRNA lincRNA MGP_NODShiLtJ_T0049091.1 MGP_NODShiLtJ_G0024139.1 mouse_genomes_project 18 39305859 39308447 + MGP_NODShiLtJ_P0049091 Pcdhb1 protein_coding protein_coding MGP_NODShiLtJ_T0100280.1 MGP_NODShiLtJ_G0038674.1 mouse_genomes_project 18 27034335 27034466 + Gm23674 snoRNA snoRNA MGP_NODShiLtJ_T0049882.1 MGP_NODShiLtJ_G0024427.1 mouse_genomes_project 18 87912547 88017038 - MGP_NODShiLtJ_P0049882 Nfatc1 protein_coding protein_coding MGP_NODShiLtJ_T0049883.1 MGP_NODShiLtJ_G0024427.1 mouse_genomes_project 18 87912547 88021949 - MGP_NODShiLtJ_P0049883 Nfatc1 protein_coding protein_coding MGP_NODShiLtJ_T0049884.1 MGP_NODShiLtJ_G0024427.1 mouse_genomes_project 18 87912547 88021949 - MGP_NODShiLtJ_P0049884 Nfatc1 protein_coding protein_coding MGP_NODShiLtJ_T0049885.1 MGP_NODShiLtJ_G0024427.1 mouse_genomes_project 18 87954821 88017038 - MGP_NODShiLtJ_P0049885 Nfatc1 protein_coding protein_coding MGP_NODShiLtJ_T0049708.1 MGP_NODShiLtJ_G0024370.1 mouse_genomes_project 18 75964621 76133300 - MGP_NODShiLtJ_P0049708 Rab27b protein_coding protein_coding MGP_NODShiLtJ_T0049709.1 MGP_NODShiLtJ_G0024370.1 mouse_genomes_project 18 75969146 76041076 - MGP_NODShiLtJ_P0049709 Rab27b protein_coding protein_coding MGP_NODShiLtJ_T0049710.1 MGP_NODShiLtJ_G0024370.1 mouse_genomes_project 18 75969146 76041076 - MGP_NODShiLtJ_P0049710 Rab27b protein_coding protein_coding MGP_NODShiLtJ_T0049711.1 MGP_NODShiLtJ_G0024370.1 mouse_genomes_project 18 76129858 76133269 - Rab27b protein_coding retained_intron MGP_NODShiLtJ_T0048791.1 MGP_NODShiLtJ_G0024020.1 mouse_genomes_project 18 24031250 24053830 + Mapre2 protein_coding retained_intron MGP_NODShiLtJ_T0048792.1 MGP_NODShiLtJ_G0024020.1 mouse_genomes_project 18 24031256 24155009 + MGP_NODShiLtJ_P0048792 Mapre2 protein_coding protein_coding MGP_NODShiLtJ_T0048793.1 MGP_NODShiLtJ_G0024020.1 mouse_genomes_project 18 24031310 24132044 + MGP_NODShiLtJ_P0048793 Mapre2 protein_coding protein_coding MGP_NODShiLtJ_T0048794.1 MGP_NODShiLtJ_G0024020.1 mouse_genomes_project 18 24032642 24163677 + MGP_NODShiLtJ_P0048794 Mapre2 protein_coding protein_coding MGP_NODShiLtJ_T0048795.1 MGP_NODShiLtJ_G0024020.1 mouse_genomes_project 18 24032665 24069972 + Mapre2 protein_coding processed_transcript MGP_NODShiLtJ_T0048796.1 MGP_NODShiLtJ_G0024020.1 mouse_genomes_project 18 24075876 24105200 + Mapre2 protein_coding retained_intron MGP_NODShiLtJ_T0048797.1 MGP_NODShiLtJ_G0024020.1 mouse_genomes_project 18 24075959 24165175 + MGP_NODShiLtJ_P0048797 Mapre2 protein_coding protein_coding MGP_NODShiLtJ_T0048798.1 MGP_NODShiLtJ_G0024020.1 mouse_genomes_project 18 24075959 24162244 + MGP_NODShiLtJ_P0048798 Mapre2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0100286.1 MGP_NODShiLtJ_G0038680.1 mouse_genomes_project 18 35738192 35738318 + Gm24432 snoRNA snoRNA MGP_NODShiLtJ_T0049111.1 MGP_NODShiLtJ_G0024156.1 mouse_genomes_project 18 39558464 39563302 + MGP_NODShiLtJ_P0049111 Pcdhb18 protein_coding protein_coding MGP_NODShiLtJ_T0048755.1 MGP_NODShiLtJ_G0024002.1 mouse_genomes_project 18 19969879 20085635 + MGP_NODShiLtJ_P0048755 Dsg1a protein_coding protein_coding MGP_NODShiLtJ_T0049293.1 MGP_NODShiLtJ_G0024232.1 mouse_genomes_project 18 47689074 47756203 + MGP_NODShiLtJ_P0049293 Ythdc2 protein_coding protein_coding MGP_NODShiLtJ_T0049294.1 MGP_NODShiLtJ_G0024232.1 mouse_genomes_project 18 47709704 47711035 + Ythdc2 protein_coding retained_intron MGP_NODShiLtJ_T0049295.1 MGP_NODShiLtJ_G0024232.1 mouse_genomes_project 18 47717960 47756203 + MGP_NODShiLtJ_P0049295 Ythdc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049296.1 MGP_NODShiLtJ_G0024232.1 mouse_genomes_project 18 47718150 47718679 + Ythdc2 protein_coding retained_intron MGP_NODShiLtJ_T0003752.1 MGP_NODShiLtJ_G0003367.1 mouse_genomes_project 18 38959625 38960183 - Gm37753 antisense antisense MGP_NODShiLtJ_T0099025.1 MGP_NODShiLtJ_G0037419.1 mouse_genomes_project 18 7282933 7283036 - Gm23350 snRNA snRNA MGP_NODShiLtJ_T0010164.1 MGP_NODShiLtJ_G0008297.1 mouse_genomes_project 18 66267283 66267347 + Mir6983 miRNA miRNA MGP_NODShiLtJ_T0048650.1 MGP_NODShiLtJ_G0023963.1 mouse_genomes_project 18 6788691 6926366 - MGP_NODShiLtJ_P0048650 Ccny protein_coding protein_coding MGP_NODShiLtJ_T0013213.1 MGP_NODShiLtJ_G0011321.1 mouse_genomes_project 18 38898352 38900485 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099030.1 MGP_NODShiLtJ_G0037424.1 mouse_genomes_project 18 24089129 24089231 - Gm23207 snRNA snRNA MGP_NODShiLtJ_T0048763.1 MGP_NODShiLtJ_G0024008.1 mouse_genomes_project 18 20539537 20540588 - MGP_NODShiLtJ_P0048763 Gm10269 protein_coding protein_coding MGP_NODShiLtJ_T0099038.1 MGP_NODShiLtJ_G0037432.1 mouse_genomes_project 18 53157750 53157904 - Gm25440 snRNA snRNA MGP_NODShiLtJ_T0049134.1 MGP_NODShiLtJ_G0024173.1 mouse_genomes_project 18 39805709 39929365 + MGP_NODShiLtJ_P0049134 Pcdhga8 protein_coding protein_coding MGP_NODShiLtJ_T0099045.1 MGP_NODShiLtJ_G0037439.1 mouse_genomes_project 18 66645070 66645171 - Gm25834 snRNA snRNA MGP_NODShiLtJ_T0017478.1 MGP_NODShiLtJ_G0015231.1 mouse_genomes_project 18 39910248 39927690 + Gm38182 processed_transcript processed_transcript MGP_NODShiLtJ_T0017479.1 MGP_NODShiLtJ_G0015231.1 mouse_genomes_project 18 39910517 39927548 + Gm38182 processed_transcript processed_transcript MGP_NODShiLtJ_T0017480.1 MGP_NODShiLtJ_G0015231.1 mouse_genomes_project 18 39910728 39927869 + Gm38182 processed_transcript processed_transcript MGP_NODShiLtJ_T0017481.1 MGP_NODShiLtJ_G0015231.1 mouse_genomes_project 18 39910813 39927872 + Gm38182 processed_transcript processed_transcript MGP_NODShiLtJ_T0017482.1 MGP_NODShiLtJ_G0015231.1 mouse_genomes_project 18 39911115 39927870 + Gm38182 processed_transcript processed_transcript MGP_NODShiLtJ_T0049114.1 MGP_NODShiLtJ_G0024159.1 mouse_genomes_project 18 39585012 39590871 + MGP_NODShiLtJ_P0049114 Pcdhb21 protein_coding protein_coding MGP_NODShiLtJ_T0013215.1 MGP_NODShiLtJ_G0011323.1 mouse_genomes_project 18 39494932 39495803 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013229.1 MGP_NODShiLtJ_G0011337.1 mouse_genomes_project 18 57183872 57184431 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010157.1 MGP_NODShiLtJ_G0008290.1 mouse_genomes_project 18 61159678 61159738 + Mir1258 miRNA miRNA MGP_NODShiLtJ_T0048801.1 MGP_NODShiLtJ_G0024023.1 mouse_genomes_project 18 24267038 24285977 + MGP_NODShiLtJ_P0048801 Zfp35 protein_coding protein_coding MGP_NODShiLtJ_T0049120.1 MGP_NODShiLtJ_G0024164.1 mouse_genomes_project 18 39746435 39929362 + MGP_NODShiLtJ_P0049120 Pcdhga2 protein_coding protein_coding MGP_NODShiLtJ_T0049367.1 MGP_NODShiLtJ_G0024260.1 mouse_genomes_project 18 56853621 56874063 + MGP_NODShiLtJ_P0049367 1700034E13Rik protein_coding protein_coding MGP_NODShiLtJ_T0049368.1 MGP_NODShiLtJ_G0024260.1 mouse_genomes_project 18 56853628 56874063 + MGP_NODShiLtJ_P0049368 1700034E13Rik protein_coding protein_coding MGP_NODShiLtJ_T0013203.1 MGP_NODShiLtJ_G0011311.1 mouse_genomes_project 18 21240572 21240880 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010145.1 MGP_NODShiLtJ_G0008278.1 mouse_genomes_project 18 34454941 34455042 - Mir6361 miRNA miRNA MGP_NODShiLtJ_T0000985.1 MGP_NODShiLtJ_G0000911.1 mouse_genomes_project 18 59821972 59822404 + TEC TEC MGP_NODShiLtJ_T0097787.1 MGP_NODShiLtJ_G0036199.1 mouse_genomes_project 18 98156186 98160049 - pseudogene pseudogene MGP_NODShiLtJ_T0048590.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2631842 2836058 + MGP_NODShiLtJ_P0048590 Zeb1 protein_coding protein_coding MGP_NODShiLtJ_T0048591.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2631854 2767094 + Zeb1 protein_coding retained_intron MGP_NODShiLtJ_T0048592.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2631873 2827519 + MGP_NODShiLtJ_P0048592 Zeb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048593.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2631894 2827173 + MGP_NODShiLtJ_P0048593 Zeb1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048594.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2633290 2687003 + Zeb1 protein_coding processed_transcript MGP_NODShiLtJ_T0048595.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2633584 2813085 + MGP_NODShiLtJ_P0048595 Zeb1 protein_coding protein_coding MGP_NODShiLtJ_T0048596.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2634185 2828345 + Zeb1 protein_coding retained_intron MGP_NODShiLtJ_T0048597.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2643701 2688417 + Zeb1 protein_coding processed_transcript MGP_NODShiLtJ_T0048598.1 MGP_NODShiLtJ_G0023950.1 mouse_genomes_project 18 2812923 2833395 + Zeb1 protein_coding processed_transcript MGP_NODShiLtJ_T0048743.1 MGP_NODShiLtJ_G0023996.1 mouse_genomes_project 18 13696567 13982918 - MGP_NODShiLtJ_P0048743 Chst9 protein_coding protein_coding MGP_NODShiLtJ_T0048744.1 MGP_NODShiLtJ_G0023996.1 mouse_genomes_project 18 13696567 14021671 - MGP_NODShiLtJ_P0048744 Chst9 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049341.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53642058 53758478 + MGP_NODShiLtJ_P0049341 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049342.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53642122 53716463 + Tnfaip8 protein_coding processed_transcript MGP_NODShiLtJ_T0049343.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53642160 53760707 + MGP_NODShiLtJ_P0049343 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049344.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53642166 53774439 + Tnfaip8 protein_coding processed_transcript MGP_NODShiLtJ_T0049345.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53684102 53758271 + MGP_NODShiLtJ_P0049345 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049346.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53695603 53758328 + MGP_NODShiLtJ_P0049346 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049347.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53695613 53711619 + Tnfaip8 protein_coding processed_transcript MGP_NODShiLtJ_T0049348.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53695614 53758163 + MGP_NODShiLtJ_P0049348 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049349.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53711931 53712300 + MGP_NODShiLtJ_P0049349 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049350.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53716852 53718579 + Tnfaip8 protein_coding retained_intron MGP_NODShiLtJ_T0049351.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53716860 53757834 + MGP_NODShiLtJ_P0049351 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049352.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53716863 53757947 + MGP_NODShiLtJ_P0049352 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049353.1 MGP_NODShiLtJ_G0024250.1 mouse_genomes_project 18 53718445 53759259 + MGP_NODShiLtJ_P0049353 Tnfaip8 protein_coding protein_coding MGP_NODShiLtJ_T0049385.1 MGP_NODShiLtJ_G0024268.1 mouse_genomes_project 18 58197610 58308913 + MGP_NODShiLtJ_P0049385 Csnk1g3 protein_coding protein_coding MGP_NODShiLtJ_T0011356.1 MGP_NODShiLtJ_G0009489.1 mouse_genomes_project 18 80243883 80243990 + Gm26438 misc_RNA misc_RNA MGP_NODShiLtJ_T0049757.1 MGP_NODShiLtJ_G0024387.1 mouse_genomes_project 18 80950351 81050115 + MGP_NODShiLtJ_P0049757 Cfap53 protein_coding protein_coding MGP_NODShiLtJ_T0049758.1 MGP_NODShiLtJ_G0024387.1 mouse_genomes_project 18 80950383 81050113 + MGP_NODShiLtJ_P0049758 Cfap53 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049759.1 MGP_NODShiLtJ_G0024387.1 mouse_genomes_project 18 81038256 81050059 + Cfap53 protein_coding processed_transcript MGP_NODShiLtJ_T0049005.1 MGP_NODShiLtJ_G0024102.1 mouse_genomes_project 18 37865538 38058022 - MGP_NODShiLtJ_P0049005 Nrg2 protein_coding protein_coding MGP_NODShiLtJ_T0049006.1 MGP_NODShiLtJ_G0024102.1 mouse_genomes_project 18 37865538 38058022 - MGP_NODShiLtJ_P0049006 Nrg2 protein_coding protein_coding MGP_NODShiLtJ_T0049007.1 MGP_NODShiLtJ_G0024102.1 mouse_genomes_project 18 37865745 37905639 - MGP_NODShiLtJ_P0049007 Nrg2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049008.1 MGP_NODShiLtJ_G0024102.1 mouse_genomes_project 18 37875227 38057874 - MGP_NODShiLtJ_P0049008 Nrg2 protein_coding protein_coding MGP_NODShiLtJ_T0013217.1 MGP_NODShiLtJ_G0011325.1 mouse_genomes_project 18 40884143 40884745 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010179.1 MGP_NODShiLtJ_G0008312.1 mouse_genomes_project 18 90243000 90243060 + Mir5112 miRNA miRNA MGP_NODShiLtJ_T0006984.1 MGP_NODShiLtJ_G0005732.1 mouse_genomes_project 18 73558788 73559934 - Gm26910 lincRNA lincRNA MGP_NODShiLtJ_T0010142.1 MGP_NODShiLtJ_G0008275.1 mouse_genomes_project 18 10701709 10701794 + Mir1948 miRNA miRNA MGP_NODShiLtJ_T0049581.1 MGP_NODShiLtJ_G0024339.1 mouse_genomes_project 18 71245705 71299271 + MGP_NODShiLtJ_P0049581 Oacyl protein_coding protein_coding MGP_NODShiLtJ_T0049582.1 MGP_NODShiLtJ_G0024339.1 mouse_genomes_project 18 71245707 71299335 + MGP_NODShiLtJ_P0049582 Oacyl protein_coding protein_coding MGP_NODShiLtJ_T0049583.1 MGP_NODShiLtJ_G0024339.1 mouse_genomes_project 18 71296703 71298073 + Oacyl protein_coding processed_transcript MGP_NODShiLtJ_T0013225.1 MGP_NODShiLtJ_G0011333.1 mouse_genomes_project 18 50530764 50532569 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048653.1 MGP_NODShiLtJ_G0023966.1 mouse_genomes_project 18 7237331 7237805 - MGP_NODShiLtJ_P0048653 Gm17430 protein_coding protein_coding MGP_NODShiLtJ_T0048816.1 MGP_NODShiLtJ_G0024027.1 mouse_genomes_project 18 24780154 24787052 + MGP_NODShiLtJ_P0048816 2700062C07Rik protein_coding protein_coding MGP_NODShiLtJ_T0100303.1 MGP_NODShiLtJ_G0038697.1 mouse_genomes_project 18 81749251 81749316 + Gm26202 snoRNA snoRNA MGP_NODShiLtJ_T0017484.1 MGP_NODShiLtJ_G0015233.1 mouse_genomes_project 18 53364193 53365572 + Gm16283 processed_transcript processed_transcript MGP_NODShiLtJ_T0049794.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83791752 83833925 + MGP_NODShiLtJ_P0049794 Hdhd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049796.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83805740 83834647 + MGP_NODShiLtJ_P0049796 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0049797.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83805740 83823675 + MGP_NODShiLtJ_P0049797 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0049798.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83805751 83833925 + MGP_NODShiLtJ_P0049798 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0049799.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83805751 83823675 + MGP_NODShiLtJ_P0049799 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0049800.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83805776 83818515 + MGP_NODShiLtJ_P0049800 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0049801.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83806009 83835378 + MGP_NODShiLtJ_P0049801 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0049802.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83806009 83816677 + MGP_NODShiLtJ_P0049802 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0049803.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83806043 83834647 + MGP_NODShiLtJ_P0049803 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0049804.1 MGP_NODShiLtJ_G0024400.1 mouse_genomes_project 18 83806062 83835378 + MGP_NODShiLtJ_P0049804 Hdhd2 protein_coding protein_coding MGP_NODShiLtJ_T0006993.1 MGP_NODShiLtJ_G0005740.1 mouse_genomes_project 18 90669159 90670492 - 1700095A13Rik lincRNA lincRNA MGP_NODShiLtJ_T0049644.1 MGP_NODShiLtJ_G0024366.1 mouse_genomes_project 18 74245681 74263557 - MGP_NODShiLtJ_P0049644 Mc2r protein_coding protein_coding MGP_NODShiLtJ_T0049596.1 MGP_NODShiLtJ_G0024344.1 mouse_genomes_project 18 71560263 71582024 - MGP_NODShiLtJ_P0049596 Lman1 protein_coding protein_coding MGP_NODShiLtJ_T0049597.1 MGP_NODShiLtJ_G0024344.1 mouse_genomes_project 18 71562716 71582008 - MGP_NODShiLtJ_P0049597 Lman1 protein_coding protein_coding MGP_NODShiLtJ_T0049598.1 MGP_NODShiLtJ_G0024344.1 mouse_genomes_project 18 71568325 71574189 - Lman1 protein_coding processed_transcript MGP_NODShiLtJ_T0049599.1 MGP_NODShiLtJ_G0024344.1 mouse_genomes_project 18 71570450 71572960 - Lman1 protein_coding retained_intron MGP_NODShiLtJ_T0049600.1 MGP_NODShiLtJ_G0024344.1 mouse_genomes_project 18 71572437 71604444 - MGP_NODShiLtJ_P0049600 Lman1 protein_coding protein_coding MGP_NODShiLtJ_T0049601.1 MGP_NODShiLtJ_G0024344.1 mouse_genomes_project 18 71572890 71601617 - Lman1 protein_coding processed_transcript MGP_NODShiLtJ_T0000980.1 MGP_NODShiLtJ_G0000906.1 mouse_genomes_project 18 6353227 6354819 + TEC TEC MGP_NODShiLtJ_T0013200.1 MGP_NODShiLtJ_G0011308.1 mouse_genomes_project 18 13219580 13219959 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048620.1 MGP_NODShiLtJ_G0023953.1 mouse_genomes_project 18 3558150 3644131 - MGP_NODShiLtJ_P0048620 Epc1 protein_coding protein_coding MGP_NODShiLtJ_T0048621.1 MGP_NODShiLtJ_G0023953.1 mouse_genomes_project 18 3558152 3617181 - MGP_NODShiLtJ_P0048621 Epc1 protein_coding protein_coding MGP_NODShiLtJ_T0048622.1 MGP_NODShiLtJ_G0023953.1 mouse_genomes_project 18 3561791 3564094 - MGP_NODShiLtJ_P0048622 Epc1 protein_coding protein_coding MGP_NODShiLtJ_T0048623.1 MGP_NODShiLtJ_G0023953.1 mouse_genomes_project 18 3615484 3617181 - MGP_NODShiLtJ_P0048623 Epc1 protein_coding protein_coding MGP_NODShiLtJ_T0049553.1 MGP_NODShiLtJ_G0024331.1 mouse_genomes_project 18 69761198 69825219 + MGP_NODShiLtJ_P0049553 Onecut2 protein_coding protein_coding MGP_NODShiLtJ_T0049554.1 MGP_NODShiLtJ_G0024331.1 mouse_genomes_project 18 69761198 69825221 + MGP_NODShiLtJ_P0049554 Onecut2 protein_coding protein_coding MGP_NODShiLtJ_T0049095.1 MGP_NODShiLtJ_G0024142.1 mouse_genomes_project 18 39353126 39356842 + MGP_NODShiLtJ_P0049095 Pcdhb4 protein_coding protein_coding MGP_NODShiLtJ_T0049167.1 MGP_NODShiLtJ_G0024186.1 mouse_genomes_project 18 40043469 40046936 + MGP_NODShiLtJ_P0049167 Rell2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049168.1 MGP_NODShiLtJ_G0024186.1 mouse_genomes_project 18 40043529 40046936 + MGP_NODShiLtJ_P0049168 Rell2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049169.1 MGP_NODShiLtJ_G0024186.1 mouse_genomes_project 18 40043978 40046069 + MGP_NODShiLtJ_P0049169 Rell2 protein_coding protein_coding MGP_NODShiLtJ_T0049170.1 MGP_NODShiLtJ_G0024186.1 mouse_genomes_project 18 40044014 40047554 + MGP_NODShiLtJ_P0049170 Rell2 protein_coding protein_coding MGP_NODShiLtJ_T0049171.1 MGP_NODShiLtJ_G0024186.1 mouse_genomes_project 18 40044774 40047563 + MGP_NODShiLtJ_P0049171 Rell2 protein_coding protein_coding MGP_NODShiLtJ_T0049172.1 MGP_NODShiLtJ_G0024186.1 mouse_genomes_project 18 40045083 40046430 + Rell2 protein_coding retained_intron MGP_NODShiLtJ_T0049173.1 MGP_NODShiLtJ_G0024186.1 mouse_genomes_project 18 40045124 40046560 + Rell2 protein_coding retained_intron MGP_NODShiLtJ_T0048566.1 MGP_NODShiLtJ_G0023944.1 mouse_genomes_project 18 1114630 1132546 + MGP_NODShiLtJ_P0048566 Lyzl1 protein_coding protein_coding MGP_NODShiLtJ_T0048567.1 MGP_NODShiLtJ_G0023944.1 mouse_genomes_project 18 1114660 1132546 + MGP_NODShiLtJ_P0048567 Lyzl1 protein_coding protein_coding MGP_NODShiLtJ_T0049516.1 MGP_NODShiLtJ_G0024317.1 mouse_genomes_project 18 67408879 67411012 - MGP_NODShiLtJ_P0049516 Adrb2 protein_coding protein_coding MGP_NODShiLtJ_T0049051.1 MGP_NODShiLtJ_G0024117.1 mouse_genomes_project 18 38701621 38705097 + MGP_NODShiLtJ_P0049051 Wdr55 protein_coding protein_coding MGP_NODShiLtJ_T0010167.1 MGP_NODShiLtJ_G0008300.1 mouse_genomes_project 18 66835807 66835877 - Mir145a miRNA miRNA MGP_NODShiLtJ_T0099046.1 MGP_NODShiLtJ_G0037440.1 mouse_genomes_project 18 68857314 68857377 + Gm23581 snRNA snRNA MGP_NODShiLtJ_T0000988.1 MGP_NODShiLtJ_G0000914.1 mouse_genomes_project 18 71143023 71144287 + TEC TEC MGP_NODShiLtJ_T0013199.1 MGP_NODShiLtJ_G0011307.1 mouse_genomes_project 18 10900736 10901376 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049837.1 MGP_NODShiLtJ_G0024410.1 mouse_genomes_project 18 84762637 84862172 + MGP_NODShiLtJ_P0049837 Pstpip2 protein_coding protein_coding MGP_NODShiLtJ_T0099029.1 MGP_NODShiLtJ_G0037423.1 mouse_genomes_project 18 21307816 21307923 - Gm22886 snRNA snRNA MGP_NODShiLtJ_T0049128.1 MGP_NODShiLtJ_G0024169.1 mouse_genomes_project 18 39772761 39929365 + MGP_NODShiLtJ_P0049128 Pcdhga5 protein_coding protein_coding MGP_NODShiLtJ_T0049618.1 MGP_NODShiLtJ_G0024355.1 mouse_genomes_project 18 73241130 73311583 - MGP_NODShiLtJ_P0049618 Spire1 protein_coding protein_coding MGP_NODShiLtJ_T0049619.1 MGP_NODShiLtJ_G0024355.1 mouse_genomes_project 18 73241130 73308036 - MGP_NODShiLtJ_P0049619 Spire1 protein_coding protein_coding MGP_NODShiLtJ_T0049620.1 MGP_NODShiLtJ_G0024355.1 mouse_genomes_project 18 73241134 73311639 - MGP_NODShiLtJ_P0049620 Spire1 protein_coding protein_coding MGP_NODShiLtJ_T0049621.1 MGP_NODShiLtJ_G0024355.1 mouse_genomes_project 18 73244537 73378300 - MGP_NODShiLtJ_P0049621 Spire1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049082.1 MGP_NODShiLtJ_G0024134.1 mouse_genomes_project 18 39018958 39023370 + Pcdha11 protein_coding retained_intron MGP_NODShiLtJ_T0049083.1 MGP_NODShiLtJ_G0024134.1 mouse_genomes_project 18 39018960 39191934 + Pcdha11 protein_coding retained_intron MGP_NODShiLtJ_T0049084.1 MGP_NODShiLtJ_G0024134.1 mouse_genomes_project 18 39018998 39218915 + MGP_NODShiLtJ_P0049084 Pcdha11 protein_coding protein_coding MGP_NODShiLtJ_T0049085.1 MGP_NODShiLtJ_G0024134.1 mouse_genomes_project 18 39019078 39218646 + MGP_NODShiLtJ_P0049085 Pcdha11 protein_coding protein_coding MGP_NODShiLtJ_T0049086.1 MGP_NODShiLtJ_G0024134.1 mouse_genomes_project 18 39021587 39216473 + MGP_NODShiLtJ_P0049086 Pcdha11 protein_coding protein_coding MGP_NODShiLtJ_T0049316.1 MGP_NODShiLtJ_G0024241.1 mouse_genomes_project 18 49772148 49796315 - MGP_NODShiLtJ_P0049316 Cdo1 protein_coding protein_coding MGP_NODShiLtJ_T0098185.1 MGP_NODShiLtJ_G0036597.1 mouse_genomes_project 18 81499304 81499383 - Scarna17 scaRNA scaRNA MGP_NODShiLtJ_T0003754.1 MGP_NODShiLtJ_G0003369.1 mouse_genomes_project 18 39203367 39203806 - Gm38097 antisense antisense MGP_NODShiLtJ_T0049495.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66740413 66776378 + MGP_NODShiLtJ_P0049495 Csnk1a1 protein_coding protein_coding MGP_NODShiLtJ_T0049496.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66740452 66774622 + MGP_NODShiLtJ_P0049496 Csnk1a1 protein_coding protein_coding MGP_NODShiLtJ_T0049497.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66740457 66768470 + MGP_NODShiLtJ_P0049497 Csnk1a1 protein_coding protein_coding MGP_NODShiLtJ_T0049498.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66740457 66771959 + MGP_NODShiLtJ_P0049498 Csnk1a1 protein_coding protein_coding MGP_NODShiLtJ_T0049499.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66740467 66768616 + MGP_NODShiLtJ_P0049499 Csnk1a1 protein_coding protein_coding MGP_NODShiLtJ_T0049500.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66740474 66743377 + Csnk1a1 protein_coding retained_intron MGP_NODShiLtJ_T0049501.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66740478 66774500 + MGP_NODShiLtJ_P0049501 Csnk1a1 protein_coding protein_coding MGP_NODShiLtJ_T0049502.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66740827 66773849 + MGP_NODShiLtJ_P0049502 Csnk1a1 protein_coding protein_coding MGP_NODShiLtJ_T0049503.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66760920 66768472 + MGP_NODShiLtJ_P0049503 Csnk1a1 protein_coding protein_coding MGP_NODShiLtJ_T0049504.1 MGP_NODShiLtJ_G0024310.1 mouse_genomes_project 18 66769169 66772827 + Csnk1a1 protein_coding processed_transcript MGP_NODShiLtJ_T0049513.1 MGP_NODShiLtJ_G0024315.1 mouse_genomes_project 18 67004046 67126323 - MGP_NODShiLtJ_P0049513 Ablim3 protein_coding protein_coding MGP_NODShiLtJ_T0049514.1 MGP_NODShiLtJ_G0024315.1 mouse_genomes_project 18 67004046 67126351 - MGP_NODShiLtJ_P0049514 Ablim3 protein_coding protein_coding MGP_NODShiLtJ_T0049952.1 MGP_NODShiLtJ_G0024449.1 mouse_genomes_project 18 99653193 99695420 + MGP_NODShiLtJ_P0049952 Tmx3 protein_coding protein_coding MGP_NODShiLtJ_T0013197.1 MGP_NODShiLtJ_G0011305.1 mouse_genomes_project 18 10469392 10470167 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010180.1 MGP_NODShiLtJ_G0008313.1 mouse_genomes_project 18 97744671 97744752 + Mir6359 miRNA miRNA MGP_NODShiLtJ_T0097983.1 MGP_NODShiLtJ_G0036395.1 mouse_genomes_project 18 25019366 25019481 - n-R5s23 rRNA rRNA MGP_NODShiLtJ_T0049436.1 MGP_NODShiLtJ_G0024291.1 mouse_genomes_project 18 65649169 65678104 + MGP_NODShiLtJ_P0049436 Dctn4 protein_coding protein_coding MGP_NODShiLtJ_T0049437.1 MGP_NODShiLtJ_G0024291.1 mouse_genomes_project 18 65649179 65678107 + MGP_NODShiLtJ_P0049437 Dctn4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048868.1 MGP_NODShiLtJ_G0024055.1 mouse_genomes_project 18 33902271 33963593 + MGP_NODShiLtJ_P0048868 Bin1 protein_coding protein_coding MGP_NODShiLtJ_T0048869.1 MGP_NODShiLtJ_G0024055.1 mouse_genomes_project 18 33902271 33963593 + MGP_NODShiLtJ_P0048869 Bin1 protein_coding protein_coding MGP_NODShiLtJ_T0049045.1 MGP_NODShiLtJ_G0024112.1 mouse_genomes_project 18 38615915 38630640 - MGP_NODShiLtJ_P0049045 E230025N22Rik protein_coding protein_coding MGP_NODShiLtJ_T0048687.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10112963 10126278 + 3110002H16Rik protein_coding retained_intron MGP_NODShiLtJ_T0048688.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10112963 10135475 + MGP_NODShiLtJ_P0048688 3110002H16Rik protein_coding protein_coding MGP_NODShiLtJ_T0048689.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10112985 10125733 + 3110002H16Rik protein_coding retained_intron MGP_NODShiLtJ_T0048690.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10112998 10135452 + 3110002H16Rik protein_coding retained_intron MGP_NODShiLtJ_T0048691.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10124731 10130077 + MGP_NODShiLtJ_P0048691 3110002H16Rik protein_coding protein_coding MGP_NODShiLtJ_T0048692.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10125686 10133698 + MGP_NODShiLtJ_P0048692 3110002H16Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048693.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10130908 10135452 + 3110002H16Rik protein_coding retained_intron MGP_NODShiLtJ_T0048694.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10131132 10135409 + 3110002H16Rik protein_coding retained_intron MGP_NODShiLtJ_T0048695.1 MGP_NODShiLtJ_G0023980.1 mouse_genomes_project 18 10134469 10135452 + 3110002H16Rik protein_coding retained_intron MGP_NODShiLtJ_T0049268.1 MGP_NODShiLtJ_G0024216.1 mouse_genomes_project 18 46239811 46425936 - MGP_NODShiLtJ_P0049268 Jakmip2 protein_coding protein_coding MGP_NODShiLtJ_T0049049.1 MGP_NODShiLtJ_G0024116.1 mouse_genomes_project 18 38685035 38699024 + MGP_NODShiLtJ_P0049049 Ik protein_coding protein_coding MGP_NODShiLtJ_T0049050.1 MGP_NODShiLtJ_G0024116.1 mouse_genomes_project 18 38685078 38699027 + MGP_NODShiLtJ_P0049050 Ik protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049277.1 MGP_NODShiLtJ_G0024222.1 mouse_genomes_project 18 46861169 46874102 + MGP_NODShiLtJ_P0049277 Spink6 protein_coding protein_coding MGP_NODShiLtJ_T0048817.1 MGP_NODShiLtJ_G0024028.1 mouse_genomes_project 18 24795045 24851413 - MGP_NODShiLtJ_P0048817 Rprd1a protein_coding protein_coding MGP_NODShiLtJ_T0049097.1 MGP_NODShiLtJ_G0024144.1 mouse_genomes_project 18 39381767 39384214 + MGP_NODShiLtJ_P0049097 Pcdhb6 protein_coding protein_coding MGP_NODShiLtJ_T0049098.1 MGP_NODShiLtJ_G0024144.1 mouse_genomes_project 18 39381792 39385622 + MGP_NODShiLtJ_P0049098 Pcdhb6 protein_coding protein_coding MGP_NODShiLtJ_T0049752.1 MGP_NODShiLtJ_G0024384.1 mouse_genomes_project 18 80853380 80867605 - MGP_NODShiLtJ_P0049752 Ska1 protein_coding protein_coding MGP_NODShiLtJ_T0049753.1 MGP_NODShiLtJ_G0024384.1 mouse_genomes_project 18 80853380 80867605 - MGP_NODShiLtJ_P0049753 Ska1 protein_coding protein_coding MGP_NODShiLtJ_T0006942.1 MGP_NODShiLtJ_G0005702.1 mouse_genomes_project 18 8403538 8408263 + 4930563E18Rik lincRNA lincRNA MGP_NODShiLtJ_T0010159.1 MGP_NODShiLtJ_G0008292.1 mouse_genomes_project 18 64529157 64529263 + Mir6355 miRNA miRNA MGP_NODShiLtJ_T0049610.1 MGP_NODShiLtJ_G0024349.1 mouse_genomes_project 18 72945998 72969452 - MGP_NODShiLtJ_P0049610 Mppe1 protein_coding protein_coding MGP_NODShiLtJ_T0049611.1 MGP_NODShiLtJ_G0024349.1 mouse_genomes_project 18 72947242 72968902 - MGP_NODShiLtJ_P0049611 Mppe1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049236.1 MGP_NODShiLtJ_G0024199.1 mouse_genomes_project 18 42029177 42031763 + MGP_NODShiLtJ_P0049236 Pabpc2 protein_coding protein_coding MGP_NODShiLtJ_T0006969.1 MGP_NODShiLtJ_G0005721.1 mouse_genomes_project 18 53092527 53093679 + 1700044K03Rik lincRNA lincRNA MGP_NODShiLtJ_T0049615.1 MGP_NODShiLtJ_G0024353.1 mouse_genomes_project 18 73152381 73201148 - MGP_NODShiLtJ_P0049615 Afg3l2 protein_coding protein_coding MGP_NODShiLtJ_T0049616.1 MGP_NODShiLtJ_G0024353.1 mouse_genomes_project 18 73152892 73200983 - MGP_NODShiLtJ_P0049616 Afg3l2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048742.1 MGP_NODShiLtJ_G0023995.1 mouse_genomes_project 18 13633185 13647605 - MGP_NODShiLtJ_P0048742 Aqp4 protein_coding protein_coding MGP_NODShiLtJ_T0017507.1 MGP_NODShiLtJ_G0015240.1 mouse_genomes_project 18 84761351 84764483 - F830208F22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017508.1 MGP_NODShiLtJ_G0015240.1 mouse_genomes_project 18 84761351 84764836 - F830208F22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0049380.1 MGP_NODShiLtJ_G0024265.1 mouse_genomes_project 18 57679742 57694162 - MGP_NODShiLtJ_P0049380 Ppic protein_coding protein_coding MGP_NODShiLtJ_T0048999.1 MGP_NODShiLtJ_G0024101.1 mouse_genomes_project 18 37810108 37862545 + MGP_NODShiLtJ_P0048999 Psd2 protein_coding protein_coding MGP_NODShiLtJ_T0049000.1 MGP_NODShiLtJ_G0024101.1 mouse_genomes_project 18 37810343 37862545 + MGP_NODShiLtJ_P0049000 Psd2 protein_coding protein_coding MGP_NODShiLtJ_T0049001.1 MGP_NODShiLtJ_G0024101.1 mouse_genomes_project 18 37810345 37862548 + MGP_NODShiLtJ_P0049001 Psd2 protein_coding protein_coding MGP_NODShiLtJ_T0049002.1 MGP_NODShiLtJ_G0024101.1 mouse_genomes_project 18 37810380 37862413 + MGP_NODShiLtJ_P0049002 Psd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049003.1 MGP_NODShiLtJ_G0024101.1 mouse_genomes_project 18 37810383 37862507 + MGP_NODShiLtJ_P0049003 Psd2 protein_coding protein_coding MGP_NODShiLtJ_T0049004.1 MGP_NODShiLtJ_G0024101.1 mouse_genomes_project 18 37833230 37853044 + Psd2 protein_coding retained_intron MGP_NODShiLtJ_T0049377.1 MGP_NODShiLtJ_G0024263.1 mouse_genomes_project 18 57432409 57479562 + MGP_NODShiLtJ_P0049377 Snx2 protein_coding protein_coding MGP_NODShiLtJ_T0048770.1 MGP_NODShiLtJ_G0024013.1 mouse_genomes_project 18 20975598 21007607 + MGP_NODShiLtJ_P0048770 Mep1b protein_coding protein_coding MGP_NODShiLtJ_T0049104.1 MGP_NODShiLtJ_G0024149.1 mouse_genomes_project 18 39474204 39479421 + MGP_NODShiLtJ_P0049104 protein_coding protein_coding MGP_NODShiLtJ_T0097988.1 MGP_NODShiLtJ_G0036400.1 mouse_genomes_project 18 68859172 68859292 + Gm22560 rRNA rRNA MGP_NODShiLtJ_T0097987.1 MGP_NODShiLtJ_G0036399.1 mouse_genomes_project 18 62997627 62997731 - Gm25660 rRNA rRNA MGP_NODShiLtJ_T0049782.1 MGP_NODShiLtJ_G0024396.1 mouse_genomes_project 18 82638900 82990119 + MGP_NODShiLtJ_P0049782 Zbtb7c protein_coding protein_coding MGP_NODShiLtJ_T0049783.1 MGP_NODShiLtJ_G0024396.1 mouse_genomes_project 18 82900221 82988001 + MGP_NODShiLtJ_P0049783 Zbtb7c protein_coding protein_coding MGP_NODShiLtJ_T0049522.1 MGP_NODShiLtJ_G0024323.1 mouse_genomes_project 18 67908359 67921933 + Spink10 protein_coding processed_transcript MGP_NODShiLtJ_T0049523.1 MGP_NODShiLtJ_G0024323.1 mouse_genomes_project 18 67912878 67924083 + MGP_NODShiLtJ_P0049523 Spink10 protein_coding protein_coding MGP_NODShiLtJ_T0049524.1 MGP_NODShiLtJ_G0024323.1 mouse_genomes_project 18 67913158 67914957 + Spink10 protein_coding processed_transcript MGP_NODShiLtJ_T0049525.1 MGP_NODShiLtJ_G0024323.1 mouse_genomes_project 18 67913212 67916607 + Spink10 protein_coding processed_transcript MGP_NODShiLtJ_T0003744.1 MGP_NODShiLtJ_G0003362.1 mouse_genomes_project 18 20449229 20522211 - Gm16090 antisense antisense MGP_NODShiLtJ_T0099028.1 MGP_NODShiLtJ_G0037422.1 mouse_genomes_project 18 20725099 20725248 - Gm24959 snRNA snRNA MGP_NODShiLtJ_T0011336.1 MGP_NODShiLtJ_G0009469.1 mouse_genomes_project 18 14585906 14586256 - Gm24385 misc_RNA misc_RNA MGP_NODShiLtJ_T0010149.1 MGP_NODShiLtJ_G0008282.1 mouse_genomes_project 18 38755813 38755923 + Gm23424 miRNA miRNA MGP_NODShiLtJ_T0049202.1 MGP_NODShiLtJ_G0024195.1 mouse_genomes_project 18 40743305 40758297 - MGP_NODShiLtJ_P0049202 Spry4 protein_coding protein_coding MGP_NODShiLtJ_T0003763.1 MGP_NODShiLtJ_G0003378.1 mouse_genomes_project 18 45590199 45593621 + 4933407I08Rik antisense antisense MGP_NODShiLtJ_T0049081.1 MGP_NODShiLtJ_G0024133.1 mouse_genomes_project 18 39013454 39218915 + MGP_NODShiLtJ_P0049081 Pcdha11 protein_coding protein_coding MGP_NODShiLtJ_T0048981.1 MGP_NODShiLtJ_G0024093.1 mouse_genomes_project 18 37441042 37445930 - MGP_NODShiLtJ_P0048981 Prob1 protein_coding protein_coding MGP_NODShiLtJ_T0048982.1 MGP_NODShiLtJ_G0024093.1 mouse_genomes_project 18 37441046 37442698 - Prob1 protein_coding processed_transcript MGP_NODShiLtJ_T0048983.1 MGP_NODShiLtJ_G0024093.1 mouse_genomes_project 18 37442858 37445879 - MGP_NODShiLtJ_P0048983 Prob1 protein_coding protein_coding MGP_NODShiLtJ_T0048800.1 MGP_NODShiLtJ_G0024022.1 mouse_genomes_project 18 24247991 24258113 - MGP_NODShiLtJ_P0048800 Zscan30 protein_coding protein_coding MGP_NODShiLtJ_T0048854.1 MGP_NODShiLtJ_G0024045.1 mouse_genomes_project 18 33300655 33411849 + MGP_NODShiLtJ_P0048854 Wdr33 protein_coding protein_coding MGP_NODShiLtJ_T0048855.1 MGP_NODShiLtJ_G0024045.1 mouse_genomes_project 18 33300655 33340857 + MGP_NODShiLtJ_P0048855 Wdr33 protein_coding protein_coding MGP_NODShiLtJ_T0006939.1 MGP_NODShiLtJ_G0005699.1 mouse_genomes_project 18 1334531 1340843 - Gm26865 lincRNA lincRNA MGP_NODShiLtJ_T0099043.1 MGP_NODShiLtJ_G0037437.1 mouse_genomes_project 18 62387570 62387676 - Gm26038 snRNA snRNA MGP_NODShiLtJ_T0048901.1 MGP_NODShiLtJ_G0024067.1 mouse_genomes_project 18 36078231 36110493 + MGP_NODShiLtJ_P0048901 Pkd2l2 protein_coding protein_coding MGP_NODShiLtJ_T0048902.1 MGP_NODShiLtJ_G0024067.1 mouse_genomes_project 18 36078231 36111486 + MGP_NODShiLtJ_P0048902 Pkd2l2 protein_coding protein_coding MGP_NODShiLtJ_T0048701.1 MGP_NODShiLtJ_G0023982.1 mouse_genomes_project 18 10199782 10256178 - MGP_NODShiLtJ_P0048701 Ankrd29 protein_coding protein_coding MGP_NODShiLtJ_T0048702.1 MGP_NODShiLtJ_G0023982.1 mouse_genomes_project 18 10199785 10220145 - Ankrd29 protein_coding processed_transcript MGP_NODShiLtJ_T0048703.1 MGP_NODShiLtJ_G0023982.1 mouse_genomes_project 18 10202001 10256105 - MGP_NODShiLtJ_P0048703 Ankrd29 protein_coding protein_coding MGP_NODShiLtJ_T0048704.1 MGP_NODShiLtJ_G0023982.1 mouse_genomes_project 18 10225284 10256187 - MGP_NODShiLtJ_P0048704 Ankrd29 protein_coding protein_coding MGP_NODShiLtJ_T0049422.1 MGP_NODShiLtJ_G0024283.1 mouse_genomes_project 18 63347572 63411947 + MGP_NODShiLtJ_P0049422 Slc27a6 protein_coding protein_coding MGP_NODShiLtJ_T0097984.1 MGP_NODShiLtJ_G0036396.1 mouse_genomes_project 18 36185320 36185437 + n-R5s24 rRNA rRNA MGP_NODShiLtJ_T0099026.1 MGP_NODShiLtJ_G0037420.1 mouse_genomes_project 18 10106039 10106158 + Gm25289 snRNA snRNA MGP_NODShiLtJ_T0049483.1 MGP_NODShiLtJ_G0024304.1 mouse_genomes_project 18 66255490 66282306 + MGP_NODShiLtJ_P0049483 Csf1r protein_coding protein_coding MGP_NODShiLtJ_T0049484.1 MGP_NODShiLtJ_G0024304.1 mouse_genomes_project 18 66255661 66283316 + MGP_NODShiLtJ_P0049484 Csf1r protein_coding protein_coding MGP_NODShiLtJ_T0049019.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38473073 38501658 + MGP_NODShiLtJ_P0049019 Ankhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049020.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38473697 38587377 + MGP_NODShiLtJ_P0049020 Ankhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049021.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38473697 38587377 + MGP_NODShiLtJ_P0049021 Ankhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049022.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38473764 38594384 + MGP_NODShiLtJ_P0049022 Ankhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049023.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38498021 38501940 + Ankhd1 protein_coding retained_intron MGP_NODShiLtJ_T0049024.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38520990 38549246 + MGP_NODShiLtJ_P0049024 Ankhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049025.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38527410 38561537 + Ankhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0049026.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38535735 38561525 + MGP_NODShiLtJ_P0049026 Ankhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049027.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38536473 38548836 + Ankhd1 protein_coding retained_intron MGP_NODShiLtJ_T0049028.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38566397 38571054 + MGP_NODShiLtJ_P0049028 Ankhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049029.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38566621 38571060 + MGP_NODShiLtJ_P0049029 Ankhd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049030.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38569438 38572336 + Ankhd1 protein_coding retained_intron MGP_NODShiLtJ_T0049031.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38572363 38587382 + MGP_NODShiLtJ_P0049031 Ankhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049032.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38575881 38594384 + MGP_NODShiLtJ_P0049032 Ankhd1 protein_coding protein_coding MGP_NODShiLtJ_T0049033.1 MGP_NODShiLtJ_G0024108.1 mouse_genomes_project 18 38583978 38587279 + MGP_NODShiLtJ_P0049033 Ankhd1 protein_coding protein_coding MGP_NODShiLtJ_T0003753.1 MGP_NODShiLtJ_G0003368.1 mouse_genomes_project 18 39017117 39031061 - antisense antisense MGP_NODShiLtJ_T0099039.1 MGP_NODShiLtJ_G0037433.1 mouse_genomes_project 18 55159735 55159842 - Gm25739 snRNA snRNA MGP_NODShiLtJ_T0006968.1 MGP_NODShiLtJ_G0005720.1 mouse_genomes_project 18 47683118 47686426 + Gm43425 lincRNA lincRNA MGP_NODShiLtJ_T0006970.1 MGP_NODShiLtJ_G0005722.1 mouse_genomes_project 18 53416685 53432439 - 1700065O20Rik lincRNA lincRNA MGP_NODShiLtJ_T0049110.1 MGP_NODShiLtJ_G0024155.1 mouse_genomes_project 18 39552415 39558426 + MGP_NODShiLtJ_P0049110 Pcdhb17 protein_coding protein_coding MGP_NODShiLtJ_T0049142.1 MGP_NODShiLtJ_G0024179.1 mouse_genomes_project 18 39837351 39929365 + MGP_NODShiLtJ_P0049142 Pcdhga11 protein_coding protein_coding MGP_NODShiLtJ_T0049400.1 MGP_NODShiLtJ_G0024273.1 mouse_genomes_project 18 61215171 61221713 + MGP_NODShiLtJ_P0049400 Tex43 protein_coding protein_coding MGP_NODShiLtJ_T0049401.1 MGP_NODShiLtJ_G0024273.1 mouse_genomes_project 18 61215200 61219671 + MGP_NODShiLtJ_P0049401 Tex43 protein_coding protein_coding MGP_NODShiLtJ_T0049402.1 MGP_NODShiLtJ_G0024273.1 mouse_genomes_project 18 61215210 61221643 + MGP_NODShiLtJ_P0049402 Tex43 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049403.1 MGP_NODShiLtJ_G0024273.1 mouse_genomes_project 18 61215247 61221713 + MGP_NODShiLtJ_P0049403 Tex43 protein_coding protein_coding MGP_NODShiLtJ_T0049519.1 MGP_NODShiLtJ_G0024320.1 mouse_genomes_project 18 67758493 67806215 - MGP_NODShiLtJ_P0049519 Fbxo38 protein_coding protein_coding MGP_NODShiLtJ_T0049903.1 MGP_NODShiLtJ_G0024432.1 mouse_genomes_project 18 90097061 90205012 - MGP_NODShiLtJ_P0049903 Zfp236 protein_coding protein_coding MGP_NODShiLtJ_T0049904.1 MGP_NODShiLtJ_G0024432.1 mouse_genomes_project 18 90097063 90194468 - MGP_NODShiLtJ_P0049904 Zfp236 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049905.1 MGP_NODShiLtJ_G0024432.1 mouse_genomes_project 18 90098944 90122056 - MGP_NODShiLtJ_P0049905 Zfp236 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049906.1 MGP_NODShiLtJ_G0024432.1 mouse_genomes_project 18 90100623 90203581 - MGP_NODShiLtJ_P0049906 Zfp236 protein_coding protein_coding MGP_NODShiLtJ_T0049907.1 MGP_NODShiLtJ_G0024432.1 mouse_genomes_project 18 90100623 90203581 - MGP_NODShiLtJ_P0049907 Zfp236 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049908.1 MGP_NODShiLtJ_G0024432.1 mouse_genomes_project 18 90147226 90148410 - Zfp236 protein_coding retained_intron MGP_NODShiLtJ_T0049909.1 MGP_NODShiLtJ_G0024432.1 mouse_genomes_project 18 90191582 90202670 - MGP_NODShiLtJ_P0049909 Zfp236 protein_coding protein_coding MGP_NODShiLtJ_T0097784.1 MGP_NODShiLtJ_G0036196.1 mouse_genomes_project 18 7764110 7764623 - pseudogene pseudogene MGP_NODShiLtJ_T0049776.1 MGP_NODShiLtJ_G0024394.1 mouse_genomes_project 18 82163602 82193115 + MGP_NODShiLtJ_P0049776 Smad7 protein_coding protein_coding MGP_NODShiLtJ_T0049777.1 MGP_NODShiLtJ_G0024394.1 mouse_genomes_project 18 82164957 82192659 + MGP_NODShiLtJ_P0049777 Smad7 protein_coding protein_coding MGP_NODShiLtJ_T0049778.1 MGP_NODShiLtJ_G0024394.1 mouse_genomes_project 18 82165064 82191166 + MGP_NODShiLtJ_P0049778 Smad7 protein_coding protein_coding MGP_NODShiLtJ_T0049779.1 MGP_NODShiLtJ_G0024394.1 mouse_genomes_project 18 82166050 82191545 + MGP_NODShiLtJ_P0049779 Smad7 protein_coding protein_coding MGP_NODShiLtJ_T0049780.1 MGP_NODShiLtJ_G0024394.1 mouse_genomes_project 18 82170989 82191181 + Smad7 protein_coding processed_transcript MGP_NODShiLtJ_T0049122.1 MGP_NODShiLtJ_G0024166.1 mouse_genomes_project 18 39757709 39929362 + MGP_NODShiLtJ_P0049122 Pcdhgb1 protein_coding protein_coding MGP_NODShiLtJ_T0049123.1 MGP_NODShiLtJ_G0024166.1 mouse_genomes_project 18 39757733 39764632 + Pcdhgb1 protein_coding processed_transcript MGP_NODShiLtJ_T0049088.1 MGP_NODShiLtJ_G0024136.1 mouse_genomes_project 18 39116105 39218915 + MGP_NODShiLtJ_P0049088 Pcdhac1 protein_coding protein_coding MGP_NODShiLtJ_T0003779.1 MGP_NODShiLtJ_G0003386.1 mouse_genomes_project 18 75951301 75953991 + 4930448D08Rik antisense antisense MGP_NODShiLtJ_T0010136.1 MGP_NODShiLtJ_G0008269.1 mouse_genomes_project 18 7354669 7354763 - Gm23637 miRNA miRNA MGP_NODShiLtJ_T0003745.1 MGP_NODShiLtJ_G0003363.1 mouse_genomes_project 18 21602729 21606430 + 4930426D05Rik antisense antisense MGP_NODShiLtJ_T0003746.1 MGP_NODShiLtJ_G0003363.1 mouse_genomes_project 18 21602846 21606423 + 4930426D05Rik antisense antisense MGP_NODShiLtJ_T0003747.1 MGP_NODShiLtJ_G0003363.1 mouse_genomes_project 18 21603841 21606439 + 4930426D05Rik antisense antisense MGP_NODShiLtJ_T0003748.1 MGP_NODShiLtJ_G0003363.1 mouse_genomes_project 18 21603844 21607387 + 4930426D05Rik antisense antisense MGP_NODShiLtJ_T0048654.1 MGP_NODShiLtJ_G0023967.1 mouse_genomes_project 18 7514700 7556991 + MGP_NODShiLtJ_P0048654 Thoc1 protein_coding protein_coding MGP_NODShiLtJ_T0048777.1 MGP_NODShiLtJ_G0024017.1 mouse_genomes_project 18 22432257 22629410 + MGP_NODShiLtJ_P0048777 Asxl3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048778.1 MGP_NODShiLtJ_G0024017.1 mouse_genomes_project 18 22432790 22468741 + Asxl3 protein_coding retained_intron MGP_NODShiLtJ_T0048779.1 MGP_NODShiLtJ_G0024017.1 mouse_genomes_project 18 22432996 22634089 + MGP_NODShiLtJ_P0048779 Asxl3 protein_coding protein_coding MGP_NODShiLtJ_T0048780.1 MGP_NODShiLtJ_G0024017.1 mouse_genomes_project 18 22432996 22633877 + MGP_NODShiLtJ_P0048780 Asxl3 protein_coding protein_coding MGP_NODShiLtJ_T0048936.1 MGP_NODShiLtJ_G0024081.1 mouse_genomes_project 18 36561919 36567043 + MGP_NODShiLtJ_P0048936 Egr1 protein_coding protein_coding MGP_NODShiLtJ_T0048937.1 MGP_NODShiLtJ_G0024081.1 mouse_genomes_project 18 36563299 36567015 + MGP_NODShiLtJ_P0048937 Egr1 protein_coding protein_coding MGP_NODShiLtJ_T0049850.1 MGP_NODShiLtJ_G0024420.1 mouse_genomes_project 18 87440545 87448956 - MGP_NODShiLtJ_P0049850 Rbfa protein_coding protein_coding MGP_NODShiLtJ_T0049943.1 MGP_NODShiLtJ_G0024445.1 mouse_genomes_project 18 97388840 97491783 - Socs6 protein_coding processed_transcript MGP_NODShiLtJ_T0049944.1 MGP_NODShiLtJ_G0024445.1 mouse_genomes_project 18 97398615 97653462 - Socs6 protein_coding processed_transcript MGP_NODShiLtJ_T0049945.1 MGP_NODShiLtJ_G0024445.1 mouse_genomes_project 18 97620933 97645054 - MGP_NODShiLtJ_P0049945 Socs6 protein_coding protein_coding MGP_NODShiLtJ_T0049946.1 MGP_NODShiLtJ_G0024445.1 mouse_genomes_project 18 97626100 97690207 - MGP_NODShiLtJ_P0049946 Socs6 protein_coding protein_coding MGP_NODShiLtJ_T0011344.1 MGP_NODShiLtJ_G0009477.1 mouse_genomes_project 18 40751197 40751268 + Gm27369 misc_RNA misc_RNA MGP_NODShiLtJ_T0049242.1 MGP_NODShiLtJ_G0024205.1 mouse_genomes_project 18 44621110 44744835 + MGP_NODShiLtJ_P0049242 Sh3rf2 protein_coding protein_coding MGP_NODShiLtJ_T0049243.1 MGP_NODShiLtJ_G0024205.1 mouse_genomes_project 18 44621153 44744326 + MGP_NODShiLtJ_P0049243 Sh3rf2 protein_coding protein_coding MGP_NODShiLtJ_T0049244.1 MGP_NODShiLtJ_G0024205.1 mouse_genomes_project 18 44723192 44742000 + Sh3rf2 protein_coding processed_transcript MGP_NODShiLtJ_T0049245.1 MGP_NODShiLtJ_G0024205.1 mouse_genomes_project 18 44723280 44739014 + Sh3rf2 protein_coding processed_transcript MGP_NODShiLtJ_T0049370.1 MGP_NODShiLtJ_G0024262.1 mouse_genomes_project 18 56999550 57069235 + MGP_NODShiLtJ_P0049370 Sncaip protein_coding protein_coding MGP_NODShiLtJ_T0049371.1 MGP_NODShiLtJ_G0024262.1 mouse_genomes_project 18 57069158 57143123 + MGP_NODShiLtJ_P0049371 Sncaip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049372.1 MGP_NODShiLtJ_G0024262.1 mouse_genomes_project 18 57069158 57143416 + MGP_NODShiLtJ_P0049372 Sncaip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049373.1 MGP_NODShiLtJ_G0024262.1 mouse_genomes_project 18 57069158 57143416 + MGP_NODShiLtJ_P0049373 Sncaip protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049374.1 MGP_NODShiLtJ_G0024262.1 mouse_genomes_project 18 57069204 57142849 + MGP_NODShiLtJ_P0049374 Sncaip protein_coding protein_coding MGP_NODShiLtJ_T0049375.1 MGP_NODShiLtJ_G0024262.1 mouse_genomes_project 18 57069204 57142849 + MGP_NODShiLtJ_P0049375 Sncaip protein_coding protein_coding MGP_NODShiLtJ_T0049376.1 MGP_NODShiLtJ_G0024262.1 mouse_genomes_project 18 57069204 57143412 + MGP_NODShiLtJ_P0049376 Sncaip protein_coding protein_coding MGP_NODShiLtJ_T0049606.1 MGP_NODShiLtJ_G0024346.1 mouse_genomes_project 18 72075682 72082629 + MGP_NODShiLtJ_P0049606 Pmaip1 protein_coding protein_coding MGP_NODShiLtJ_T0003764.1 MGP_NODShiLtJ_G0003379.1 mouse_genomes_project 18 47507664 47522138 + A930012L18Rik antisense antisense MGP_NODShiLtJ_T0003765.1 MGP_NODShiLtJ_G0003379.1 mouse_genomes_project 18 47508102 47518446 + A930012L18Rik antisense antisense MGP_NODShiLtJ_T0048955.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37345675 37356374 + MGP_NODShiLtJ_P0048955 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048956.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37345721 37356007 + MGP_NODShiLtJ_P0048956 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048957.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37345740 37376068 + MGP_NODShiLtJ_P0048957 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048958.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37345746 37376068 + MGP_NODShiLtJ_P0048958 Matr3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048959.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37345748 37376068 + MGP_NODShiLtJ_P0048959 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048960.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37345828 37376068 + MGP_NODShiLtJ_P0048960 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048961.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37345974 37376068 + MGP_NODShiLtJ_P0048961 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048962.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37345982 37376068 + MGP_NODShiLtJ_P0048962 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048963.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37346016 37365581 + MGP_NODShiLtJ_P0048963 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048964.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37346212 37356087 + MGP_NODShiLtJ_P0048964 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048965.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37346218 37365866 + MGP_NODShiLtJ_P0048965 Matr3 protein_coding protein_coding MGP_NODShiLtJ_T0048966.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37355815 37359094 + Matr3 protein_coding retained_intron MGP_NODShiLtJ_T0048967.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37364538 37365849 + Matr3 protein_coding retained_intron MGP_NODShiLtJ_T0048968.1 MGP_NODShiLtJ_G0024089.1 mouse_genomes_project 18 37365599 37367299 + Matr3 protein_coding retained_intron MGP_NODShiLtJ_T0049010.1 MGP_NODShiLtJ_G0024104.1 mouse_genomes_project 18 38235105 38257292 + MGP_NODShiLtJ_P0049010 Cystm1 protein_coding protein_coding MGP_NODShiLtJ_T0049011.1 MGP_NODShiLtJ_G0024104.1 mouse_genomes_project 18 38239270 38296166 + MGP_NODShiLtJ_P0049011 Cystm1 protein_coding protein_coding MGP_NODShiLtJ_T0049012.1 MGP_NODShiLtJ_G0024104.1 mouse_genomes_project 18 38239336 38258827 + Cystm1 protein_coding retained_intron MGP_NODShiLtJ_T0049013.1 MGP_NODShiLtJ_G0024104.1 mouse_genomes_project 18 38239347 38285609 + MGP_NODShiLtJ_P0049013 Cystm1 protein_coding protein_coding MGP_NODShiLtJ_T0049014.1 MGP_NODShiLtJ_G0024104.1 mouse_genomes_project 18 38256352 38295726 + MGP_NODShiLtJ_P0049014 Cystm1 protein_coding protein_coding MGP_NODShiLtJ_T0049478.1 MGP_NODShiLtJ_G0024301.1 mouse_genomes_project 18 66139150 66159344 - MGP_NODShiLtJ_P0049478 Slc6a7 protein_coding protein_coding MGP_NODShiLtJ_T0049275.1 MGP_NODShiLtJ_G0024221.1 mouse_genomes_project 18 46813838 46818162 + MGP_NODShiLtJ_P0049275 Spink14 protein_coding protein_coding MGP_NODShiLtJ_T0049276.1 MGP_NODShiLtJ_G0024221.1 mouse_genomes_project 18 46814663 46818162 + MGP_NODShiLtJ_P0049276 Spink14 protein_coding protein_coding MGP_NODShiLtJ_T0048663.1 MGP_NODShiLtJ_G0023970.1 mouse_genomes_project 18 7993449 8186983 + Greb1l protein_coding retained_intron MGP_NODShiLtJ_T0048664.1 MGP_NODShiLtJ_G0023970.1 mouse_genomes_project 18 7993451 8247094 + MGP_NODShiLtJ_P0048664 Greb1l protein_coding protein_coding MGP_NODShiLtJ_T0048665.1 MGP_NODShiLtJ_G0023970.1 mouse_genomes_project 18 8136927 8223525 + MGP_NODShiLtJ_P0048665 Greb1l protein_coding protein_coding MGP_NODShiLtJ_T0048666.1 MGP_NODShiLtJ_G0023970.1 mouse_genomes_project 18 8194825 8200931 + Greb1l protein_coding retained_intron MGP_NODShiLtJ_T0048667.1 MGP_NODShiLtJ_G0023970.1 mouse_genomes_project 18 8196133 8238051 + MGP_NODShiLtJ_P0048667 Greb1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048668.1 MGP_NODShiLtJ_G0023970.1 mouse_genomes_project 18 8238132 8243033 + Greb1l protein_coding processed_transcript MGP_NODShiLtJ_T0101085.1 MGP_NODShiLtJ_G0039440.1 mouse_genomes_project 18 35865927 35879917 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101086.1 MGP_NODShiLtJ_G0039440.1 mouse_genomes_project 18 35867945 35868217 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0048746.1 MGP_NODShiLtJ_G0023998.1 mouse_genomes_project 18 15043304 15282659 - MGP_NODShiLtJ_P0048746 Cdh2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048747.1 MGP_NODShiLtJ_G0023998.1 mouse_genomes_project 18 15242420 15282727 - Cdh2 protein_coding retained_intron MGP_NODShiLtJ_T0049358.1 MGP_NODShiLtJ_G0024252.1 mouse_genomes_project 18 53956946 53961597 + MGP_NODShiLtJ_P0049358 Fam170a protein_coding protein_coding MGP_NODShiLtJ_T0049055.1 MGP_NODShiLtJ_G0024119.1 mouse_genomes_project 18 38707914 38725332 - MGP_NODShiLtJ_P0049055 Hars protein_coding protein_coding MGP_NODShiLtJ_T0049369.1 MGP_NODShiLtJ_G0024261.1 mouse_genomes_project 18 56905916 56907906 + MGP_NODShiLtJ_P0049369 Gykl1 protein_coding protein_coding MGP_NODShiLtJ_T0006952.1 MGP_NODShiLtJ_G0005708.1 mouse_genomes_project 18 33277073 33285640 - Gm26533 lincRNA lincRNA MGP_NODShiLtJ_T0006982.1 MGP_NODShiLtJ_G0005730.1 mouse_genomes_project 18 68747074 68770971 + Gm26972 lincRNA lincRNA MGP_NODShiLtJ_T0100290.1 MGP_NODShiLtJ_G0038684.1 mouse_genomes_project 18 37340563 37340759 + Snora74a snoRNA snoRNA MGP_NODShiLtJ_T0049068.1 MGP_NODShiLtJ_G0024124.1 mouse_genomes_project 18 38934597 39218915 + MGP_NODShiLtJ_P0049068 Pcdha3 protein_coding protein_coding MGP_NODShiLtJ_T0100276.1 MGP_NODShiLtJ_G0038670.1 mouse_genomes_project 18 8457386 8457508 + Gm25116 snoRNA snoRNA MGP_NODShiLtJ_T0010166.1 MGP_NODShiLtJ_G0008299.1 mouse_genomes_project 18 66570869 66570935 - Mir378a miRNA miRNA MGP_NODShiLtJ_T0013227.1 MGP_NODShiLtJ_G0011335.1 mouse_genomes_project 18 53899305 53900050 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013216.1 MGP_NODShiLtJ_G0011324.1 mouse_genomes_project 18 40879467 40879581 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048589.1 MGP_NODShiLtJ_G0023949.1 mouse_genomes_project 18 2227256 2359603 - MGP_NODShiLtJ_P0048589 Zfp438 protein_coding protein_coding MGP_NODShiLtJ_T0048852.1 MGP_NODShiLtJ_G0024043.1 mouse_genomes_project 18 33255667 33279920 + MGP_NODShiLtJ_P0048852 Ammecr1l protein_coding protein_coding MGP_NODShiLtJ_T0048853.1 MGP_NODShiLtJ_G0024044.1 mouse_genomes_project 18 33285753 33293250 + MGP_NODShiLtJ_P0048853 Polr2d protein_coding protein_coding MGP_NODShiLtJ_T0049105.1 MGP_NODShiLtJ_G0024150.1 mouse_genomes_project 18 39496310 39499916 + MGP_NODShiLtJ_P0049105 protein_coding protein_coding MGP_NODShiLtJ_T0048856.1 MGP_NODShiLtJ_G0024046.1 mouse_genomes_project 18 33318745 33319786 - MGP_NODShiLtJ_P0048856 Gm6665 protein_coding protein_coding MGP_NODShiLtJ_T0049471.1 MGP_NODShiLtJ_G0024300.1 mouse_genomes_project 18 66068324 66132271 + MGP_NODShiLtJ_P0049471 Camk2a protein_coding protein_coding MGP_NODShiLtJ_T0049472.1 MGP_NODShiLtJ_G0024300.1 mouse_genomes_project 18 66068338 66085905 + Camk2a protein_coding retained_intron MGP_NODShiLtJ_T0049473.1 MGP_NODShiLtJ_G0024300.1 mouse_genomes_project 18 66068338 66129339 + MGP_NODShiLtJ_P0049473 Camk2a protein_coding protein_coding MGP_NODShiLtJ_T0049474.1 MGP_NODShiLtJ_G0024300.1 mouse_genomes_project 18 66068430 66085923 + MGP_NODShiLtJ_P0049474 Camk2a protein_coding protein_coding MGP_NODShiLtJ_T0049475.1 MGP_NODShiLtJ_G0024300.1 mouse_genomes_project 18 66069693 66098218 + MGP_NODShiLtJ_P0049475 Camk2a protein_coding protein_coding MGP_NODShiLtJ_T0049476.1 MGP_NODShiLtJ_G0024300.1 mouse_genomes_project 18 66106742 66127796 + MGP_NODShiLtJ_P0049476 Camk2a protein_coding protein_coding MGP_NODShiLtJ_T0049477.1 MGP_NODShiLtJ_G0024300.1 mouse_genomes_project 18 66106788 66128630 + MGP_NODShiLtJ_P0049477 Camk2a protein_coding protein_coding MGP_NODShiLtJ_T0048731.1 MGP_NODShiLtJ_G0023989.1 mouse_genomes_project 18 11753659 12049727 - MGP_NODShiLtJ_P0048731 Zfp521 protein_coding protein_coding MGP_NODShiLtJ_T0049624.1 MGP_NODShiLtJ_G0024358.1 mouse_genomes_project 18 73412222 73426266 + MGP_NODShiLtJ_P0049624 Psmg2 protein_coding protein_coding MGP_NODShiLtJ_T0049046.1 MGP_NODShiLtJ_G0024113.1 mouse_genomes_project 18 38663376 38665043 - MGP_NODShiLtJ_P0049046 Cd14 protein_coding protein_coding MGP_NODShiLtJ_T0049208.1 MGP_NODShiLtJ_G0024197.1 mouse_genomes_project 18 41014598 41102752 - MGP_NODShiLtJ_P0049208 Fgf1 protein_coding protein_coding MGP_NODShiLtJ_T0049209.1 MGP_NODShiLtJ_G0024197.1 mouse_genomes_project 18 41014600 41113337 - MGP_NODShiLtJ_P0049209 Fgf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049210.1 MGP_NODShiLtJ_G0024197.1 mouse_genomes_project 18 41016102 41046254 - MGP_NODShiLtJ_P0049210 Fgf1 protein_coding protein_coding MGP_NODShiLtJ_T0049211.1 MGP_NODShiLtJ_G0024197.1 mouse_genomes_project 18 41017832 41038256 - MGP_NODShiLtJ_P0049211 Fgf1 protein_coding protein_coding MGP_NODShiLtJ_T0049212.1 MGP_NODShiLtJ_G0024197.1 mouse_genomes_project 18 41023854 41045639 - MGP_NODShiLtJ_P0049212 Fgf1 protein_coding protein_coding MGP_NODShiLtJ_T0049213.1 MGP_NODShiLtJ_G0024197.1 mouse_genomes_project 18 41023895 41038369 - Fgf1 protein_coding retained_intron MGP_NODShiLtJ_T0049214.1 MGP_NODShiLtJ_G0024197.1 mouse_genomes_project 18 41038075 41113090 - MGP_NODShiLtJ_P0049214 Fgf1 protein_coding protein_coding MGP_NODShiLtJ_T0049557.1 MGP_NODShiLtJ_G0024334.1 mouse_genomes_project 18 69965639 70107700 - MGP_NODShiLtJ_P0049557 Atp8b1 protein_coding protein_coding MGP_NODShiLtJ_T0049914.1 MGP_NODShiLtJ_G0024435.1 mouse_genomes_project 18 91713180 91723619 + MGP_NODShiLtJ_P0049914 Zadh2 protein_coding protein_coding MGP_NODShiLtJ_T0048624.1 MGP_NODShiLtJ_G0023954.1 mouse_genomes_project 18 3742398 3780407 + MGP_NODShiLtJ_P0048624 4921524L21Rik protein_coding protein_coding MGP_NODShiLtJ_T0006953.1 MGP_NODShiLtJ_G0005709.1 mouse_genomes_project 18 33359463 33361996 - Gm26823 lincRNA lincRNA MGP_NODShiLtJ_T0000991.1 MGP_NODShiLtJ_G0000917.1 mouse_genomes_project 18 92016884 92020362 - TEC TEC MGP_NODShiLtJ_T0049629.1 MGP_NODShiLtJ_G0024360.1 mouse_genomes_project 18 73559952 73580596 + MGP_NODShiLtJ_P0049629 Seh1l protein_coding protein_coding MGP_NODShiLtJ_T0049784.1 MGP_NODShiLtJ_G0024397.1 mouse_genomes_project 18 83086117 83155291 + MGP_NODShiLtJ_P0049784 Smad2 protein_coding protein_coding MGP_NODShiLtJ_T0049785.1 MGP_NODShiLtJ_G0024397.1 mouse_genomes_project 18 83086238 83154290 + MGP_NODShiLtJ_P0049785 Smad2 protein_coding protein_coding MGP_NODShiLtJ_T0049786.1 MGP_NODShiLtJ_G0024397.1 mouse_genomes_project 18 83088197 83148011 + MGP_NODShiLtJ_P0049786 Smad2 protein_coding protein_coding MGP_NODShiLtJ_T0049787.1 MGP_NODShiLtJ_G0024397.1 mouse_genomes_project 18 83106799 83154854 + MGP_NODShiLtJ_P0049787 Smad2 protein_coding protein_coding MGP_NODShiLtJ_T0049788.1 MGP_NODShiLtJ_G0024397.1 mouse_genomes_project 18 83108170 83152202 + MGP_NODShiLtJ_P0049788 Smad2 protein_coding protein_coding MGP_NODShiLtJ_T0049789.1 MGP_NODShiLtJ_G0024397.1 mouse_genomes_project 18 83108170 83149398 + MGP_NODShiLtJ_P0049789 Smad2 protein_coding protein_coding MGP_NODShiLtJ_T0048938.1 MGP_NODShiLtJ_G0024082.1 mouse_genomes_project 18 36610431 36640758 - MGP_NODShiLtJ_P0048938 Etf1 protein_coding protein_coding MGP_NODShiLtJ_T0048939.1 MGP_NODShiLtJ_G0024082.1 mouse_genomes_project 18 36640584 36640692 - MGP_NODShiLtJ_P0048939 Etf1 protein_coding protein_coding MGP_NODShiLtJ_T0049830.1 MGP_NODShiLtJ_G0024407.1 mouse_genomes_project 18 84571537 84666840 - MGP_NODShiLtJ_P0049830 8030462N17Rik protein_coding protein_coding MGP_NODShiLtJ_T0049556.1 MGP_NODShiLtJ_G0024333.1 mouse_genomes_project 18 69931765 69950431 - MGP_NODShiLtJ_P0049556 Nars protein_coding protein_coding MGP_NODShiLtJ_T0048884.1 MGP_NODShiLtJ_G0024063.1 mouse_genomes_project 18 35421110 35643933 - MGP_NODShiLtJ_P0048884 Epb41l4a protein_coding protein_coding MGP_NODShiLtJ_T0049547.1 MGP_NODShiLtJ_G0024328.1 mouse_genomes_project 18 69013334 69056912 - MGP_NODShiLtJ_P0049547 Txnl1 protein_coding protein_coding MGP_NODShiLtJ_T0011352.1 MGP_NODShiLtJ_G0009485.1 mouse_genomes_project 18 64728298 64728592 - Gm26028 misc_RNA misc_RNA MGP_NODShiLtJ_T0048673.1 MGP_NODShiLtJ_G0023974.1 mouse_genomes_project 18 8423903 8522139 + MGP_NODShiLtJ_P0048673 Mib1 protein_coding protein_coding MGP_NODShiLtJ_T0048674.1 MGP_NODShiLtJ_G0023974.1 mouse_genomes_project 18 8424010 8515729 + MGP_NODShiLtJ_P0048674 Mib1 protein_coding protein_coding MGP_NODShiLtJ_T0048675.1 MGP_NODShiLtJ_G0023974.1 mouse_genomes_project 18 8424099 8455558 + Mib1 protein_coding retained_intron MGP_NODShiLtJ_T0048676.1 MGP_NODShiLtJ_G0023974.1 mouse_genomes_project 18 8460647 8522265 + MGP_NODShiLtJ_P0048676 Mib1 protein_coding protein_coding MGP_NODShiLtJ_T0048677.1 MGP_NODShiLtJ_G0023974.1 mouse_genomes_project 18 8501968 8521166 + MGP_NODShiLtJ_P0048677 Mib1 protein_coding protein_coding MGP_NODShiLtJ_T0049080.1 MGP_NODShiLtJ_G0024132.1 mouse_genomes_project 18 38998370 39218915 + MGP_NODShiLtJ_P0049080 Pcdha9 protein_coding protein_coding MGP_NODShiLtJ_T0049614.1 MGP_NODShiLtJ_G0024352.1 mouse_genomes_project 18 73138438 73150363 + MGP_NODShiLtJ_P0049614 Tubb6 protein_coding protein_coding MGP_NODShiLtJ_T0049838.1 MGP_NODShiLtJ_G0024411.1 mouse_genomes_project 18 84875658 84997381 + MGP_NODShiLtJ_P0049838 Epg5 protein_coding protein_coding MGP_NODShiLtJ_T0049282.1 MGP_NODShiLtJ_G0024227.1 mouse_genomes_project 18 47009919 47016607 + MGP_NODShiLtJ_P0049282 Gm10542 protein_coding protein_coding MGP_NODShiLtJ_T0049280.1 MGP_NODShiLtJ_G0024225.1 mouse_genomes_project 18 46967159 46976503 - MGP_NODShiLtJ_P0049280 Spinkl protein_coding protein_coding MGP_NODShiLtJ_T0049306.1 MGP_NODShiLtJ_G0024235.1 mouse_genomes_project 18 49224129 49273215 - MGP_NODShiLtJ_P0049306 Pggt1b protein_coding protein_coding MGP_NODShiLtJ_T0099023.1 MGP_NODShiLtJ_G0037417.1 mouse_genomes_project 18 660842 660906 - Gm23643 snRNA snRNA MGP_NODShiLtJ_T0097785.1 MGP_NODShiLtJ_G0036197.1 mouse_genomes_project 18 80971913 80972478 - pseudogene pseudogene MGP_NODShiLtJ_T0049384.1 MGP_NODShiLtJ_G0024267.1 mouse_genomes_project 18 58016055 58081503 - MGP_NODShiLtJ_P0049384 Cep120 protein_coding protein_coding MGP_NODShiLtJ_T0011346.1 MGP_NODShiLtJ_G0009479.1 mouse_genomes_project 18 43144776 43145081 - Gm22515 misc_RNA misc_RNA MGP_NODShiLtJ_T0049362.1 MGP_NODShiLtJ_G0024256.1 mouse_genomes_project 18 56525362 56526813 + MGP_NODShiLtJ_P0049362 Ftmt protein_coding protein_coding MGP_NODShiLtJ_T0048873.1 MGP_NODShiLtJ_G0024057.1 mouse_genomes_project 18 34371822 34378923 + MGP_NODShiLtJ_P0048873 Tslp protein_coding protein_coding MGP_NODShiLtJ_T0013191.1 MGP_NODShiLtJ_G0011299.1 mouse_genomes_project 18 7454708 7455522 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048683.1 MGP_NODShiLtJ_G0023978.1 mouse_genomes_project 18 9916642 10061445 - MGP_NODShiLtJ_P0048683 Tmem241 protein_coding protein_coding MGP_NODShiLtJ_T0048684.1 MGP_NODShiLtJ_G0023978.1 mouse_genomes_project 18 9916642 10061445 - MGP_NODShiLtJ_P0048684 Tmem241 protein_coding protein_coding MGP_NODShiLtJ_T0048685.1 MGP_NODShiLtJ_G0023978.1 mouse_genomes_project 18 10001631 10061445 - MGP_NODShiLtJ_P0048685 Tmem241 protein_coding protein_coding MGP_NODShiLtJ_T0017501.1 MGP_NODShiLtJ_G0015238.1 mouse_genomes_project 18 73055055 73080349 - B430212C06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017502.1 MGP_NODShiLtJ_G0015238.1 mouse_genomes_project 18 73055055 73062058 - B430212C06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017503.1 MGP_NODShiLtJ_G0015238.1 mouse_genomes_project 18 73055235 73079829 - B430212C06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017504.1 MGP_NODShiLtJ_G0015238.1 mouse_genomes_project 18 73056864 73062237 - B430212C06Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017505.1 MGP_NODShiLtJ_G0015238.1 mouse_genomes_project 18 73056877 73062297 - B430212C06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0100298.1 MGP_NODShiLtJ_G0038692.1 mouse_genomes_project 18 72174531 72174642 - Gm24679 snoRNA snoRNA MGP_NODShiLtJ_T0049063.1 MGP_NODShiLtJ_G0024121.1 mouse_genomes_project 18 38737323 38743067 + MGP_NODShiLtJ_P0049063 Zmat2 protein_coding protein_coding MGP_NODShiLtJ_T0006986.1 MGP_NODShiLtJ_G0005734.1 mouse_genomes_project 18 82322757 82331052 + Gm10532 lincRNA lincRNA MGP_NODShiLtJ_T0049196.1 MGP_NODShiLtJ_G0024193.1 mouse_genomes_project 18 40449822 40461354 - MGP_NODShiLtJ_P0049196 Gnpda1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049197.1 MGP_NODShiLtJ_G0024193.1 mouse_genomes_project 18 40449851 40461409 - MGP_NODShiLtJ_P0049197 Gnpda1 protein_coding protein_coding MGP_NODShiLtJ_T0049198.1 MGP_NODShiLtJ_G0024193.1 mouse_genomes_project 18 40450975 40454487 - Gnpda1 protein_coding processed_transcript MGP_NODShiLtJ_T0049199.1 MGP_NODShiLtJ_G0024193.1 mouse_genomes_project 18 40455513 40457482 - Gnpda1 protein_coding retained_intron MGP_NODShiLtJ_T0049200.1 MGP_NODShiLtJ_G0024193.1 mouse_genomes_project 18 40455605 40461315 - MGP_NODShiLtJ_P0049200 Gnpda1 protein_coding protein_coding MGP_NODShiLtJ_T0049775.1 MGP_NODShiLtJ_G0024393.1 mouse_genomes_project 18 81766021 82071766 + MGP_NODShiLtJ_P0049775 Dym protein_coding protein_coding MGP_NODShiLtJ_T0048847.1 MGP_NODShiLtJ_G0024039.1 mouse_genomes_project 18 32895846 32907483 - MGP_NODShiLtJ_P0048847 Syt4 protein_coding protein_coding MGP_NODShiLtJ_T0099040.1 MGP_NODShiLtJ_G0037434.1 mouse_genomes_project 18 55646362 55646488 - Gm25785 snRNA snRNA MGP_NODShiLtJ_T0048762.1 MGP_NODShiLtJ_G0024007.1 mouse_genomes_project 18 20522200 20531275 + MGP_NODShiLtJ_P0048762 Ttr protein_coding protein_coding MGP_NODShiLtJ_T0049281.1 MGP_NODShiLtJ_G0024226.1 mouse_genomes_project 18 46987838 47003647 - MGP_NODShiLtJ_P0049281 Spink11 protein_coding protein_coding MGP_NODShiLtJ_T0010144.1 MGP_NODShiLtJ_G0008277.1 mouse_genomes_project 18 24737630 24737691 - Mir187 miRNA miRNA MGP_NODShiLtJ_T0048670.1 MGP_NODShiLtJ_G0023972.1 mouse_genomes_project 18 8308541 8319270 + MGP_NODShiLtJ_P0048670 Snrpd1 protein_coding protein_coding MGP_NODShiLtJ_T0049354.1 MGP_NODShiLtJ_G0024251.1 mouse_genomes_project 18 53806266 53876801 + MGP_NODShiLtJ_P0049354 Hsd17b4 protein_coding protein_coding MGP_NODShiLtJ_T0049355.1 MGP_NODShiLtJ_G0024251.1 mouse_genomes_project 18 53806559 53821515 + Hsd17b4 protein_coding processed_transcript MGP_NODShiLtJ_T0049356.1 MGP_NODShiLtJ_G0024251.1 mouse_genomes_project 18 53821271 53826396 + Hsd17b4 protein_coding retained_intron MGP_NODShiLtJ_T0049357.1 MGP_NODShiLtJ_G0024251.1 mouse_genomes_project 18 53871855 53876504 + Hsd17b4 protein_coding retained_intron MGP_NODShiLtJ_T0100277.1 MGP_NODShiLtJ_G0038671.1 mouse_genomes_project 18 14161746 14161875 + Gm24228 snoRNA snoRNA MGP_NODShiLtJ_T0000981.1 MGP_NODShiLtJ_G0000907.1 mouse_genomes_project 18 46912595 46912768 + TEC TEC MGP_NODShiLtJ_T0049594.1 MGP_NODShiLtJ_G0024342.1 mouse_genomes_project 18 71511195 71515646 - MGP_NODShiLtJ_P0049594 Rax protein_coding protein_coding MGP_NODShiLtJ_T0049279.1 MGP_NODShiLtJ_G0024224.1 mouse_genomes_project 18 46957112 46960632 - MGP_NODShiLtJ_P0049279 protein_coding protein_coding MGP_NODShiLtJ_T0049888.1 MGP_NODShiLtJ_G0024429.1 mouse_genomes_project 18 88309723 88330288 - MGP_NODShiLtJ_P0049888 Sall3 protein_coding protein_coding MGP_NODShiLtJ_T0048631.1 MGP_NODShiLtJ_G0023957.1 mouse_genomes_project 18 4282518 4499049 - MGP_NODShiLtJ_P0048631 Armc4 protein_coding protein_coding MGP_NODShiLtJ_T0048632.1 MGP_NODShiLtJ_G0023957.1 mouse_genomes_project 18 4329416 4499085 - MGP_NODShiLtJ_P0048632 Armc4 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100301.1 MGP_NODShiLtJ_G0038695.1 mouse_genomes_project 18 81747437 81747503 + Snord58b snoRNA snoRNA MGP_NODShiLtJ_T0011341.1 MGP_NODShiLtJ_G0009474.1 mouse_genomes_project 18 26017284 26017594 - Gm25845 misc_RNA misc_RNA MGP_NODShiLtJ_T0099052.1 MGP_NODShiLtJ_G0037446.1 mouse_genomes_project 18 72890530 72890623 - Gm23512 snRNA snRNA MGP_NODShiLtJ_T0048758.1 MGP_NODShiLtJ_G0024005.1 mouse_genomes_project 18 20336974 20373402 + MGP_NODShiLtJ_P0048758 Dsg3 protein_coding protein_coding MGP_NODShiLtJ_T0010165.1 MGP_NODShiLtJ_G0008298.1 mouse_genomes_project 18 66570847 66570960 + Gm25301 miRNA miRNA MGP_NODShiLtJ_T0099054.1 MGP_NODShiLtJ_G0037448.1 mouse_genomes_project 18 85671759 85671919 + Gm23895 snRNA snRNA MGP_NODShiLtJ_T0049174.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40045821 40048868 - Fchsd1 protein_coding retained_intron MGP_NODShiLtJ_T0049175.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40045824 40058195 - MGP_NODShiLtJ_P0049175 Fchsd1 protein_coding protein_coding MGP_NODShiLtJ_T0049176.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40051360 40052458 - Fchsd1 protein_coding retained_intron MGP_NODShiLtJ_T0049177.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40054067 40058190 - MGP_NODShiLtJ_P0049177 Fchsd1 protein_coding protein_coding MGP_NODShiLtJ_T0049178.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40054105 40056159 - Fchsd1 protein_coding retained_intron MGP_NODShiLtJ_T0049179.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40056027 40056465 - Fchsd1 protein_coding retained_intron MGP_NODShiLtJ_T0049180.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40056048 40058190 - MGP_NODShiLtJ_P0049180 Fchsd1 protein_coding protein_coding MGP_NODShiLtJ_T0049181.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40056049 40058178 - Fchsd1 protein_coding retained_intron MGP_NODShiLtJ_T0049182.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40056214 40058190 - MGP_NODShiLtJ_P0049182 Fchsd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049183.1 MGP_NODShiLtJ_G0024187.1 mouse_genomes_project 18 40056242 40057949 - Fchsd1 protein_coding retained_intron MGP_NODShiLtJ_T0048976.1 MGP_NODShiLtJ_G0024091.1 mouse_genomes_project 18 37404427 37419459 - MGP_NODShiLtJ_P0048976 Slc23a1 protein_coding protein_coding MGP_NODShiLtJ_T0048977.1 MGP_NODShiLtJ_G0024091.1 mouse_genomes_project 18 37410791 37419411 - MGP_NODShiLtJ_P0048977 Slc23a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048978.1 MGP_NODShiLtJ_G0024091.1 mouse_genomes_project 18 37411487 37414020 - Slc23a1 protein_coding processed_transcript MGP_NODShiLtJ_T0048979.1 MGP_NODShiLtJ_G0024091.1 mouse_genomes_project 18 37414237 37419451 - Slc23a1 protein_coding processed_transcript MGP_NODShiLtJ_T0017485.1 MGP_NODShiLtJ_G0015234.1 mouse_genomes_project 18 53707948 53718824 - C030005K06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017486.1 MGP_NODShiLtJ_G0015234.1 mouse_genomes_project 18 53711371 53719008 - C030005K06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017487.1 MGP_NODShiLtJ_G0015234.1 mouse_genomes_project 18 53717441 53719008 - C030005K06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017488.1 MGP_NODShiLtJ_G0015234.1 mouse_genomes_project 18 53717461 53718769 - C030005K06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0049115.1 MGP_NODShiLtJ_G0024160.1 mouse_genomes_project 18 39590905 39593704 + MGP_NODShiLtJ_P0049115 Pcdhb22 protein_coding protein_coding MGP_NODShiLtJ_T0048662.1 MGP_NODShiLtJ_G0023969.1 mouse_genomes_project 18 7636932 7810210 - MGP_NODShiLtJ_P0048662 Rock1 protein_coding protein_coding MGP_NODShiLtJ_T0013224.1 MGP_NODShiLtJ_G0011332.1 mouse_genomes_project 18 49478960 49479536 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013223.1 MGP_NODShiLtJ_G0011331.1 mouse_genomes_project 18 48165002 48165278 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049463.1 MGP_NODShiLtJ_G0024297.1 mouse_genomes_project 18 65939635 65950021 + MGP_NODShiLtJ_P0049463 Cd74 protein_coding protein_coding MGP_NODShiLtJ_T0049890.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 89967742 90060112 + MGP_NODShiLtJ_P0049890 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049891.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 89967744 90011754 + MGP_NODShiLtJ_P0049891 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049892.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 89967758 90087998 + MGP_NODShiLtJ_P0049892 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049893.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 89967834 90087997 + MGP_NODShiLtJ_P0049893 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049894.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 89967966 90086578 + MGP_NODShiLtJ_P0049894 Mbp protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049895.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 90054387 90087998 + MGP_NODShiLtJ_P0049895 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049896.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 90054387 90087998 + MGP_NODShiLtJ_P0049896 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049897.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 90054394 90087988 + MGP_NODShiLtJ_P0049897 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049898.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 90054432 90087998 + MGP_NODShiLtJ_P0049898 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049899.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 90054454 90086517 + MGP_NODShiLtJ_P0049899 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049900.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 90054470 90087998 + MGP_NODShiLtJ_P0049900 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049901.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 90054507 90087987 + MGP_NODShiLtJ_P0049901 Mbp protein_coding protein_coding MGP_NODShiLtJ_T0049902.1 MGP_NODShiLtJ_G0024431.1 mouse_genomes_project 18 90065622 90086648 + Mbp protein_coding processed_transcript MGP_NODShiLtJ_T0048839.1 MGP_NODShiLtJ_G0024037.1 mouse_genomes_project 18 31531062 31621280 + MGP_NODShiLtJ_P0048839 Pik3c3 protein_coding protein_coding MGP_NODShiLtJ_T0048840.1 MGP_NODShiLtJ_G0024037.1 mouse_genomes_project 18 31531185 31604122 + MGP_NODShiLtJ_P0048840 Pik3c3 protein_coding protein_coding MGP_NODShiLtJ_T0048841.1 MGP_NODShiLtJ_G0024037.1 mouse_genomes_project 18 31531187 31616270 + MGP_NODShiLtJ_P0048841 Pik3c3 protein_coding protein_coding MGP_NODShiLtJ_T0048842.1 MGP_NODShiLtJ_G0024037.1 mouse_genomes_project 18 31531242 31621274 + MGP_NODShiLtJ_P0048842 Pik3c3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0013193.1 MGP_NODShiLtJ_G0011301.1 mouse_genomes_project 18 10118540 10120161 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013246.1 MGP_NODShiLtJ_G0011354.1 mouse_genomes_project 18 99430731 99431193 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0011359.1 MGP_NODShiLtJ_G0009492.1 mouse_genomes_project 18 92569361 92569660 + Gm22819 misc_RNA misc_RNA MGP_NODShiLtJ_T0099050.1 MGP_NODShiLtJ_G0037444.1 mouse_genomes_project 18 70243831 70243931 - Gm24504 snRNA snRNA MGP_NODShiLtJ_T0049304.1 MGP_NODShiLtJ_G0024234.1 mouse_genomes_project 18 49146738 49183902 - MGP_NODShiLtJ_P0049304 Trim36 protein_coding protein_coding MGP_NODShiLtJ_T0049305.1 MGP_NODShiLtJ_G0024234.1 mouse_genomes_project 18 49146738 49195741 - MGP_NODShiLtJ_P0049305 Trim36 protein_coding protein_coding MGP_NODShiLtJ_T0048986.1 MGP_NODShiLtJ_G0024095.1 mouse_genomes_project 18 37465121 37497381 - MGP_NODShiLtJ_P0048986 Dnajc18 protein_coding protein_coding MGP_NODShiLtJ_T0049247.1 MGP_NODShiLtJ_G0024207.1 mouse_genomes_project 18 44765386 44782952 - MGP_NODShiLtJ_P0049247 Plac8l1 protein_coding protein_coding MGP_NODShiLtJ_T0013240.1 MGP_NODShiLtJ_G0011348.1 mouse_genomes_project 18 84116144 84117118 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003738.1 MGP_NODShiLtJ_G0003357.1 mouse_genomes_project 18 3616467 3624129 + Gm28529 antisense antisense MGP_NODShiLtJ_T0003739.1 MGP_NODShiLtJ_G0003357.1 mouse_genomes_project 18 3616479 3617449 + Gm28529 antisense antisense MGP_NODShiLtJ_T0017471.1 MGP_NODShiLtJ_G0015229.1 mouse_genomes_project 18 39191082 39209751 - Gm10544 processed_transcript antisense MGP_NODShiLtJ_T0017472.1 MGP_NODShiLtJ_G0015229.1 mouse_genomes_project 18 39206837 39209735 - Gm10544 processed_transcript antisense MGP_NODShiLtJ_T0017473.1 MGP_NODShiLtJ_G0015229.1 mouse_genomes_project 18 39207998 39209743 - Gm10544 processed_transcript retained_intron MGP_NODShiLtJ_T0049424.1 MGP_NODShiLtJ_G0024285.1 mouse_genomes_project 18 63677196 63908964 + MGP_NODShiLtJ_P0049424 Adamts19 protein_coding protein_coding MGP_NODShiLtJ_T0097981.1 MGP_NODShiLtJ_G0036393.1 mouse_genomes_project 18 10558617 10558731 - Gm22340 rRNA rRNA MGP_NODShiLtJ_T0003780.1 MGP_NODShiLtJ_G0003387.1 mouse_genomes_project 18 81233811 81241332 - 1700120E14Rik antisense antisense MGP_NODShiLtJ_T0003781.1 MGP_NODShiLtJ_G0003387.1 mouse_genomes_project 18 81233924 81241314 - 1700120E14Rik antisense antisense MGP_NODShiLtJ_T0049078.1 MGP_NODShiLtJ_G0024130.1 mouse_genomes_project 18 38965925 39218915 + MGP_NODShiLtJ_P0049078 Pcdha7 protein_coding protein_coding MGP_NODShiLtJ_T0049510.1 MGP_NODShiLtJ_G0024314.1 mouse_genomes_project 18 66924948 66989683 - MGP_NODShiLtJ_P0049510 Afap1l1 protein_coding protein_coding MGP_NODShiLtJ_T0049511.1 MGP_NODShiLtJ_G0024314.1 mouse_genomes_project 18 66924948 66989592 - MGP_NODShiLtJ_P0049511 Afap1l1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049512.1 MGP_NODShiLtJ_G0024314.1 mouse_genomes_project 18 66925626 66989641 - Afap1l1 protein_coding retained_intron MGP_NODShiLtJ_T0048980.1 MGP_NODShiLtJ_G0024092.1 mouse_genomes_project 18 37437954 37440059 - MGP_NODShiLtJ_P0048980 Mzb1 protein_coding protein_coding MGP_NODShiLtJ_T0099059.1 MGP_NODShiLtJ_G0037453.1 mouse_genomes_project 18 94358090 94358197 + Gm25453 snRNA snRNA MGP_NODShiLtJ_T0011347.1 MGP_NODShiLtJ_G0009480.1 mouse_genomes_project 18 43343126 43343400 + Gm22483 misc_RNA misc_RNA MGP_NODShiLtJ_T0013210.1 MGP_NODShiLtJ_G0011318.1 mouse_genomes_project 18 37569576 37569927 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048652.1 MGP_NODShiLtJ_G0023965.1 mouse_genomes_project 18 7218677 7413913 + MGP_NODShiLtJ_P0048652 Colec12 protein_coding protein_coding MGP_NODShiLtJ_T0006987.1 MGP_NODShiLtJ_G0005735.1 mouse_genomes_project 18 82598263 82599535 + 1700034B16Rik lincRNA lincRNA MGP_NODShiLtJ_T0048717.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10749268 10815682 - MGP_NODShiLtJ_P0048717 Osbpl1a protein_coding protein_coding MGP_NODShiLtJ_T0048718.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10750122 10881759 - MGP_NODShiLtJ_P0048718 Osbpl1a protein_coding protein_coding MGP_NODShiLtJ_T0048719.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10750135 10950403 - MGP_NODShiLtJ_P0048719 Osbpl1a protein_coding protein_coding MGP_NODShiLtJ_T0048720.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10757301 10761882 - Osbpl1a protein_coding retained_intron MGP_NODShiLtJ_T0048721.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10761547 10862940 - MGP_NODShiLtJ_P0048721 Osbpl1a protein_coding protein_coding MGP_NODShiLtJ_T0048722.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10763210 10890828 - Osbpl1a protein_coding retained_intron MGP_NODShiLtJ_T0048723.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10766039 10869122 - MGP_NODShiLtJ_P0048723 Osbpl1a protein_coding protein_coding MGP_NODShiLtJ_T0048724.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10870232 10950540 - Osbpl1a protein_coding retained_intron MGP_NODShiLtJ_T0048725.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10900426 10950476 - MGP_NODShiLtJ_P0048725 Osbpl1a protein_coding protein_coding MGP_NODShiLtJ_T0048726.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10910732 10950505 - MGP_NODShiLtJ_P0048726 Osbpl1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048727.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10934905 10950491 - Osbpl1a protein_coding retained_intron MGP_NODShiLtJ_T0048728.1 MGP_NODShiLtJ_G0023986.1 mouse_genomes_project 18 10940468 10950488 - Osbpl1a protein_coding processed_transcript MGP_NODShiLtJ_T0100304.1 MGP_NODShiLtJ_G0038698.1 mouse_genomes_project 18 84624190 84624322 + Gm26014 snoRNA snoRNA MGP_NODShiLtJ_T0048773.1 MGP_NODShiLtJ_G0024015.1 mouse_genomes_project 18 21478790 21603650 - MGP_NODShiLtJ_P0048773 Klhl14 protein_coding protein_coding MGP_NODShiLtJ_T0048774.1 MGP_NODShiLtJ_G0024015.1 mouse_genomes_project 18 21478792 21606000 - MGP_NODShiLtJ_P0048774 Klhl14 protein_coding protein_coding MGP_NODShiLtJ_T0011334.1 MGP_NODShiLtJ_G0009467.1 mouse_genomes_project 18 10971559 10971866 + Gm26407 misc_RNA misc_RNA MGP_NODShiLtJ_T0049255.1 MGP_NODShiLtJ_G0024213.1 mouse_genomes_project 18 45275227 45549021 - Ppp2r2b protein_coding processed_transcript MGP_NODShiLtJ_T0049256.1 MGP_NODShiLtJ_G0024213.1 mouse_genomes_project 18 45283764 45548812 - MGP_NODShiLtJ_P0049256 Ppp2r2b protein_coding protein_coding MGP_NODShiLtJ_T0049257.1 MGP_NODShiLtJ_G0024213.1 mouse_genomes_project 18 45283764 45720706 - MGP_NODShiLtJ_P0049257 Ppp2r2b protein_coding protein_coding MGP_NODShiLtJ_T0049258.1 MGP_NODShiLtJ_G0024213.1 mouse_genomes_project 18 45283790 45549161 - MGP_NODShiLtJ_P0049258 Ppp2r2b protein_coding protein_coding MGP_NODShiLtJ_T0049259.1 MGP_NODShiLtJ_G0024213.1 mouse_genomes_project 18 45382604 45592961 - Ppp2r2b protein_coding processed_transcript MGP_NODShiLtJ_T0049260.1 MGP_NODShiLtJ_G0024213.1 mouse_genomes_project 18 45403254 45548333 - Ppp2r2b protein_coding processed_transcript MGP_NODShiLtJ_T0049486.1 MGP_NODShiLtJ_G0024306.1 mouse_genomes_project 18 66347334 66366012 - MGP_NODShiLtJ_P0049486 Slc26a2 protein_coding protein_coding MGP_NODShiLtJ_T0049487.1 MGP_NODShiLtJ_G0024306.1 mouse_genomes_project 18 66351639 66354780 - MGP_NODShiLtJ_P0049487 Slc26a2 protein_coding protein_coding MGP_NODShiLtJ_T0049488.1 MGP_NODShiLtJ_G0024306.1 mouse_genomes_project 18 66356114 66365780 - MGP_NODShiLtJ_P0049488 Slc26a2 protein_coding protein_coding MGP_NODShiLtJ_T0049489.1 MGP_NODShiLtJ_G0024306.1 mouse_genomes_project 18 66361587 66365757 - Slc26a2 protein_coding retained_intron MGP_NODShiLtJ_T0049771.1 MGP_NODShiLtJ_G0024389.1 mouse_genomes_project 18 81500110 81530432 + MGP_NODShiLtJ_P0049771 Acaa2 protein_coding protein_coding MGP_NODShiLtJ_T0048995.1 MGP_NODShiLtJ_G0024098.1 mouse_genomes_project 18 37531591 37538560 - MGP_NODShiLtJ_P0048995 Tmem173 protein_coding protein_coding MGP_NODShiLtJ_T0049457.1 MGP_NODShiLtJ_G0024296.1 mouse_genomes_project 18 65910967 65915021 + MGP_NODShiLtJ_P0049457 Rps14 protein_coding protein_coding MGP_NODShiLtJ_T0049458.1 MGP_NODShiLtJ_G0024296.1 mouse_genomes_project 18 65911123 65913894 + Rps14 protein_coding retained_intron MGP_NODShiLtJ_T0049459.1 MGP_NODShiLtJ_G0024296.1 mouse_genomes_project 18 65911138 65915016 + MGP_NODShiLtJ_P0049459 Rps14 protein_coding protein_coding MGP_NODShiLtJ_T0049460.1 MGP_NODShiLtJ_G0024296.1 mouse_genomes_project 18 65911710 65914335 + MGP_NODShiLtJ_P0049460 Rps14 protein_coding protein_coding MGP_NODShiLtJ_T0049461.1 MGP_NODShiLtJ_G0024296.1 mouse_genomes_project 18 65912194 65914932 + MGP_NODShiLtJ_P0049461 Rps14 protein_coding protein_coding MGP_NODShiLtJ_T0049462.1 MGP_NODShiLtJ_G0024296.1 mouse_genomes_project 18 65912719 65915020 + MGP_NODShiLtJ_P0049462 Rps14 protein_coding protein_coding MGP_NODShiLtJ_T0049056.1 MGP_NODShiLtJ_G0024120.1 mouse_genomes_project 18 38725134 38734018 + Hars2 protein_coding processed_transcript MGP_NODShiLtJ_T0049057.1 MGP_NODShiLtJ_G0024120.1 mouse_genomes_project 18 38725134 38735962 + MGP_NODShiLtJ_P0049057 Hars2 protein_coding protein_coding MGP_NODShiLtJ_T0049058.1 MGP_NODShiLtJ_G0024120.1 mouse_genomes_project 18 38725357 38735094 + MGP_NODShiLtJ_P0049058 Hars2 protein_coding protein_coding MGP_NODShiLtJ_T0049059.1 MGP_NODShiLtJ_G0024120.1 mouse_genomes_project 18 38725395 38729861 + Hars2 protein_coding retained_intron MGP_NODShiLtJ_T0049060.1 MGP_NODShiLtJ_G0024120.1 mouse_genomes_project 18 38730412 38731662 + Hars2 protein_coding retained_intron MGP_NODShiLtJ_T0049061.1 MGP_NODShiLtJ_G0024120.1 mouse_genomes_project 18 38731219 38733559 + Hars2 protein_coding retained_intron MGP_NODShiLtJ_T0049062.1 MGP_NODShiLtJ_G0024120.1 mouse_genomes_project 18 38733412 38734853 + Hars2 protein_coding retained_intron MGP_NODShiLtJ_T0049560.1 MGP_NODShiLtJ_G0024336.1 mouse_genomes_project 18 70776401 70910385 - MGP_NODShiLtJ_P0049560 Alpk2 protein_coding protein_coding MGP_NODShiLtJ_T0049561.1 MGP_NODShiLtJ_G0024336.1 mouse_genomes_project 18 70786350 70863183 - MGP_NODShiLtJ_P0049561 Alpk2 protein_coding protein_coding MGP_NODShiLtJ_T0049562.1 MGP_NODShiLtJ_G0024336.1 mouse_genomes_project 18 70877818 70910386 - Alpk2 protein_coding processed_transcript MGP_NODShiLtJ_T0049073.1 MGP_NODShiLtJ_G0024127.1 mouse_genomes_project 18 38951333 39218915 + MGP_NODShiLtJ_P0049073 Pcdha5 protein_coding protein_coding MGP_NODShiLtJ_T0049886.1 MGP_NODShiLtJ_G0024428.1 mouse_genomes_project 18 88042982 88274636 - MGP_NODShiLtJ_P0049886 Atp9b protein_coding protein_coding MGP_NODShiLtJ_T0049887.1 MGP_NODShiLtJ_G0024428.1 mouse_genomes_project 18 88044852 88274517 - MGP_NODShiLtJ_P0049887 Atp9b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010148.1 MGP_NODShiLtJ_G0008281.1 mouse_genomes_project 18 37796601 37796685 + Gm23882 miRNA miRNA MGP_NODShiLtJ_T0049116.1 MGP_NODShiLtJ_G0024161.1 mouse_genomes_project 18 39714291 39715660 - MGP_NODShiLtJ_P0049116 Slc25a2 protein_coding protein_coding MGP_NODShiLtJ_T0048771.1 MGP_NODShiLtJ_G0024014.1 mouse_genomes_project 18 21040878 21217684 - MGP_NODShiLtJ_P0048771 Garem protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048772.1 MGP_NODShiLtJ_G0024014.1 mouse_genomes_project 18 21043229 21219117 - MGP_NODShiLtJ_P0048772 Garem protein_coding protein_coding MGP_NODShiLtJ_T0099044.1 MGP_NODShiLtJ_G0037438.1 mouse_genomes_project 18 66289776 66289882 - Gm26403 snRNA snRNA MGP_NODShiLtJ_T0049438.1 MGP_NODShiLtJ_G0024292.1 mouse_genomes_project 18 65680077 65692129 + MGP_NODShiLtJ_P0049438 Rbm22 protein_coding protein_coding MGP_NODShiLtJ_T0049439.1 MGP_NODShiLtJ_G0024292.1 mouse_genomes_project 18 65680105 65680828 + Rbm22 protein_coding retained_intron MGP_NODShiLtJ_T0049440.1 MGP_NODShiLtJ_G0024292.1 mouse_genomes_project 18 65680109 65689611 + Rbm22 protein_coding retained_intron MGP_NODShiLtJ_T0049441.1 MGP_NODShiLtJ_G0024292.1 mouse_genomes_project 18 65689732 65690459 + Rbm22 protein_coding retained_intron MGP_NODShiLtJ_T0049442.1 MGP_NODShiLtJ_G0024292.1 mouse_genomes_project 18 65689915 65691310 + Rbm22 protein_coding retained_intron MGP_NODShiLtJ_T0049072.1 MGP_NODShiLtJ_G0024126.1 mouse_genomes_project 18 38942749 39927690 + MGP_NODShiLtJ_P0049072 Gm42416 protein_coding protein_coding MGP_NODShiLtJ_T0049748.1 MGP_NODShiLtJ_G0024382.1 mouse_genomes_project 18 80563613 80616676 - MGP_NODShiLtJ_P0049748 Mapk4 protein_coding protein_coding MGP_NODShiLtJ_T0049749.1 MGP_NODShiLtJ_G0024382.1 mouse_genomes_project 18 80563617 80705439 - MGP_NODShiLtJ_P0049749 Mapk4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049750.1 MGP_NODShiLtJ_G0024382.1 mouse_genomes_project 18 80606937 80706406 - Mapk4 protein_coding processed_transcript MGP_NODShiLtJ_T0049015.1 MGP_NODShiLtJ_G0024105.1 mouse_genomes_project 18 38296864 38365174 - MGP_NODShiLtJ_P0049015 Pfdn1 protein_coding protein_coding MGP_NODShiLtJ_T0049102.1 MGP_NODShiLtJ_G0024147.1 mouse_genomes_project 18 39449772 39452827 + MGP_NODShiLtJ_P0049102 Pcdhb9 protein_coding protein_coding MGP_NODShiLtJ_T0010168.1 MGP_NODShiLtJ_G0008301.1 mouse_genomes_project 18 66837178 66837241 - Mir143 miRNA miRNA MGP_NODShiLtJ_T0049910.1 MGP_NODShiLtJ_G0024433.1 mouse_genomes_project 18 90446348 90554469 + MGP_NODShiLtJ_P0049910 Zfp516 protein_coding protein_coding MGP_NODShiLtJ_T0049911.1 MGP_NODShiLtJ_G0024433.1 mouse_genomes_project 18 90450000 90554469 + MGP_NODShiLtJ_P0049911 Zfp516 protein_coding protein_coding MGP_NODShiLtJ_T0011342.1 MGP_NODShiLtJ_G0009475.1 mouse_genomes_project 18 33816292 33816600 + Gm22325 misc_RNA misc_RNA MGP_NODShiLtJ_T0013222.1 MGP_NODShiLtJ_G0011330.1 mouse_genomes_project 18 47966007 47967571 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049321.1 MGP_NODShiLtJ_G0024246.1 mouse_genomes_project 18 50056482 50200631 + MGP_NODShiLtJ_P0049321 Commd10 protein_coding protein_coding MGP_NODShiLtJ_T0049322.1 MGP_NODShiLtJ_G0024246.1 mouse_genomes_project 18 50056508 50200630 + MGP_NODShiLtJ_P0049322 Commd10 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0097992.1 MGP_NODShiLtJ_G0036404.1 mouse_genomes_project 18 81771101 81771193 + Gm27781 rRNA rRNA MGP_NODShiLtJ_T0048946.1 MGP_NODShiLtJ_G0024086.1 mouse_genomes_project 18 37010200 37205116 - MGP_NODShiLtJ_P0048946 Sil1 protein_coding protein_coding MGP_NODShiLtJ_T0010172.1 MGP_NODShiLtJ_G0008305.1 mouse_genomes_project 18 74606265 74606367 + Mir6356 miRNA miRNA MGP_NODShiLtJ_T0006978.1 MGP_NODShiLtJ_G0005728.1 mouse_genomes_project 18 66837605 66854744 - Carmn lincRNA lincRNA MGP_NODShiLtJ_T0006979.1 MGP_NODShiLtJ_G0005728.1 mouse_genomes_project 18 66838954 66854791 - Carmn lincRNA lincRNA MGP_NODShiLtJ_T0013238.1 MGP_NODShiLtJ_G0011346.1 mouse_genomes_project 18 75177390 75178225 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013194.1 MGP_NODShiLtJ_G0011302.1 mouse_genomes_project 18 10236976 10240295 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003741.1 MGP_NODShiLtJ_G0003359.1 mouse_genomes_project 18 10139245 10144153 + Gm15956 antisense antisense MGP_NODShiLtJ_T0048626.1 MGP_NODShiLtJ_G0023956.1 mouse_genomes_project 18 4093410 4126606 - Mkx protein_coding processed_transcript MGP_NODShiLtJ_T0048627.1 MGP_NODShiLtJ_G0023956.1 mouse_genomes_project 18 4124950 4198422 - MGP_NODShiLtJ_P0048627 Mkx protein_coding protein_coding MGP_NODShiLtJ_T0048628.1 MGP_NODShiLtJ_G0023956.1 mouse_genomes_project 18 4126936 4184858 - Mkx protein_coding retained_intron MGP_NODShiLtJ_T0048629.1 MGP_NODShiLtJ_G0023956.1 mouse_genomes_project 18 4194307 4197424 - Mkx protein_coding processed_transcript MGP_NODShiLtJ_T0048630.1 MGP_NODShiLtJ_G0023956.1 mouse_genomes_project 18 4195975 4198368 - Mkx protein_coding retained_intron MGP_NODShiLtJ_T0100289.1 MGP_NODShiLtJ_G0038683.1 mouse_genomes_project 18 37338023 37338164 + Mir1949 snoRNA snoRNA MGP_NODShiLtJ_T0101087.1 MGP_NODShiLtJ_G0039441.1 mouse_genomes_project 18 39104404 39106146 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101088.1 MGP_NODShiLtJ_G0039441.1 mouse_genomes_project 18 39105909 39106862 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0011354.1 MGP_NODShiLtJ_G0009487.1 mouse_genomes_project 18 72309572 72309891 + Gm22219 misc_RNA misc_RNA MGP_NODShiLtJ_T0049360.1 MGP_NODShiLtJ_G0024254.1 mouse_genomes_project 18 54996936 55231515 + MGP_NODShiLtJ_P0049360 Prr16 protein_coding protein_coding MGP_NODShiLtJ_T0048573.1 MGP_NODShiLtJ_G0023946.1 mouse_genomes_project 18 1336454 1358193 + MGP_NODShiLtJ_P0048573 Mtpap protein_coding protein_coding MGP_NODShiLtJ_T0013242.1 MGP_NODShiLtJ_G0011350.1 mouse_genomes_project 18 92343404 92344302 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010139.1 MGP_NODShiLtJ_G0008272.1 mouse_genomes_project 18 8489049 8489171 + Mir1b miRNA miRNA MGP_NODShiLtJ_T0049387.1 MGP_NODShiLtJ_G0024270.1 mouse_genomes_project 18 61036364 61121835 + MGP_NODShiLtJ_P0049387 Gramd3 protein_coding protein_coding MGP_NODShiLtJ_T0048759.1 MGP_NODShiLtJ_G0024006.1 mouse_genomes_project 18 20390219 20455786 + MGP_NODShiLtJ_P0048759 Dsg2 protein_coding protein_coding MGP_NODShiLtJ_T0048760.1 MGP_NODShiLtJ_G0024006.1 mouse_genomes_project 18 20390300 20421195 + MGP_NODShiLtJ_P0048760 Dsg2 protein_coding protein_coding MGP_NODShiLtJ_T0048761.1 MGP_NODShiLtJ_G0024006.1 mouse_genomes_project 18 20390391 20418558 + MGP_NODShiLtJ_P0048761 Dsg2 protein_coding protein_coding MGP_NODShiLtJ_T0013202.1 MGP_NODShiLtJ_G0011310.1 mouse_genomes_project 18 20979921 20980365 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048861.1 MGP_NODShiLtJ_G0024050.1 mouse_genomes_project 18 33464904 33543061 - MGP_NODShiLtJ_P0048861 Myo7b protein_coding protein_coding MGP_NODShiLtJ_T0048737.1 MGP_NODShiLtJ_G0023992.1 mouse_genomes_project 18 12868986 12924597 + MGP_NODShiLtJ_P0048737 Psma8 protein_coding protein_coding MGP_NODShiLtJ_T0006956.1 MGP_NODShiLtJ_G0005712.1 mouse_genomes_project 18 34213733 34406427 - 4930455D15Rik lincRNA lincRNA MGP_NODShiLtJ_T0099041.1 MGP_NODShiLtJ_G0037435.1 mouse_genomes_project 18 56316747 56316854 - Gm22259 snRNA snRNA MGP_NODShiLtJ_T0048802.1 MGP_NODShiLtJ_G0024024.1 mouse_genomes_project 18 24290302 24301411 - MGP_NODShiLtJ_P0048802 Zfp24 protein_coding protein_coding MGP_NODShiLtJ_T0048803.1 MGP_NODShiLtJ_G0024024.1 mouse_genomes_project 18 24294525 24300921 - MGP_NODShiLtJ_P0048803 Zfp24 protein_coding protein_coding MGP_NODShiLtJ_T0048804.1 MGP_NODShiLtJ_G0024024.1 mouse_genomes_project 18 24298571 24300971 - MGP_NODShiLtJ_P0048804 Zfp24 protein_coding protein_coding MGP_NODShiLtJ_T0049846.1 MGP_NODShiLtJ_G0024416.1 mouse_genomes_project 18 85774084 86182856 - MGP_NODShiLtJ_P0049846 Setbp1 protein_coding protein_coding MGP_NODShiLtJ_T0017489.1 MGP_NODShiLtJ_G0015235.1 mouse_genomes_project 18 62071306 62266971 - 4930511M06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017492.1 MGP_NODShiLtJ_G0015235.1 mouse_genomes_project 18 62218670 62265242 - 4930511M06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017496.1 MGP_NODShiLtJ_G0015235.1 mouse_genomes_project 18 62258630 62265345 - 4930511M06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017497.1 MGP_NODShiLtJ_G0015235.1 mouse_genomes_project 18 62259283 62267165 - 4930511M06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017498.1 MGP_NODShiLtJ_G0015235.1 mouse_genomes_project 18 62261213 62267167 - 4930511M06Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0006966.1 MGP_NODShiLtJ_G0005719.1 mouse_genomes_project 18 40352553 40366117 - 1700086O06Rik lincRNA lincRNA MGP_NODShiLtJ_T0006967.1 MGP_NODShiLtJ_G0005719.1 mouse_genomes_project 18 40352553 40365750 - 1700086O06Rik lincRNA lincRNA MGP_NODShiLtJ_T0049252.1 MGP_NODShiLtJ_G0024211.1 mouse_genomes_project 18 45136755 45212295 + MGP_NODShiLtJ_P0049252 Tcerg1 protein_coding protein_coding MGP_NODShiLtJ_T0049253.1 MGP_NODShiLtJ_G0024211.1 mouse_genomes_project 18 45136768 45211588 + MGP_NODShiLtJ_P0049253 Tcerg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0006947.1 MGP_NODShiLtJ_G0005706.1 mouse_genomes_project 18 15536481 15711173 + 1700001G01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006948.1 MGP_NODShiLtJ_G0005706.1 mouse_genomes_project 18 15536506 15571961 + 1700001G01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006949.1 MGP_NODShiLtJ_G0005706.1 mouse_genomes_project 18 15553238 15711173 + 1700001G01Rik lincRNA lincRNA MGP_NODShiLtJ_T0006950.1 MGP_NODShiLtJ_G0005706.1 mouse_genomes_project 18 15698160 15711129 + 1700001G01Rik lincRNA lincRNA MGP_NODShiLtJ_T0013186.1 MGP_NODShiLtJ_G0011294.1 mouse_genomes_project 18 2653093 2653466 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099033.1 MGP_NODShiLtJ_G0037427.1 mouse_genomes_project 18 35664722 35664783 - Gm22788 snRNA snRNA MGP_NODShiLtJ_T0049845.1 MGP_NODShiLtJ_G0024415.1 mouse_genomes_project 18 85334287 85336064 + MGP_NODShiLtJ_P0049845 Gm6133 protein_coding protein_coding MGP_NODShiLtJ_T0048880.1 MGP_NODShiLtJ_G0024061.1 mouse_genomes_project 18 35038817 35065445 - MGP_NODShiLtJ_P0048880 Nrep protein_coding protein_coding MGP_NODShiLtJ_T0048881.1 MGP_NODShiLtJ_G0024061.1 mouse_genomes_project 18 35038817 35065653 - MGP_NODShiLtJ_P0048881 Nrep protein_coding protein_coding MGP_NODShiLtJ_T0048882.1 MGP_NODShiLtJ_G0024061.1 mouse_genomes_project 18 35038817 35065526 - MGP_NODShiLtJ_P0048882 Nrep protein_coding protein_coding MGP_NODShiLtJ_T0049228.1 MGP_NODShiLtJ_G0024198.1 mouse_genomes_project 18 41625442 41712673 - MGP_NODShiLtJ_P0049228 Nr3c1 protein_coding protein_coding MGP_NODShiLtJ_T0049229.1 MGP_NODShiLtJ_G0024198.1 mouse_genomes_project 18 41625444 41710157 - MGP_NODShiLtJ_P0049229 Nr3c1 protein_coding protein_coding MGP_NODShiLtJ_T0049230.1 MGP_NODShiLtJ_G0024198.1 mouse_genomes_project 18 41626885 41714488 - MGP_NODShiLtJ_P0049230 Nr3c1 protein_coding protein_coding MGP_NODShiLtJ_T0049231.1 MGP_NODShiLtJ_G0024198.1 mouse_genomes_project 18 41629380 41710144 - MGP_NODShiLtJ_P0049231 Nr3c1 protein_coding protein_coding MGP_NODShiLtJ_T0049232.1 MGP_NODShiLtJ_G0024198.1 mouse_genomes_project 18 41638879 41714530 - MGP_NODShiLtJ_P0049232 Nr3c1 protein_coding protein_coding MGP_NODShiLtJ_T0049233.1 MGP_NODShiLtJ_G0024198.1 mouse_genomes_project 18 41709782 41716049 - MGP_NODShiLtJ_P0049233 Nr3c1 protein_coding protein_coding MGP_NODShiLtJ_T0049234.1 MGP_NODShiLtJ_G0024198.1 mouse_genomes_project 18 41709997 41713925 - MGP_NODShiLtJ_P0049234 Nr3c1 protein_coding protein_coding MGP_NODShiLtJ_T0049235.1 MGP_NODShiLtJ_G0024198.1 mouse_genomes_project 18 41710071 41716047 - MGP_NODShiLtJ_P0049235 Nr3c1 protein_coding protein_coding MGP_NODShiLtJ_T0049254.1 MGP_NODShiLtJ_G0024212.1 mouse_genomes_project 18 45214765 45216398 - MGP_NODShiLtJ_P0049254 Gpr151 protein_coding protein_coding MGP_NODShiLtJ_T0049595.1 MGP_NODShiLtJ_G0024343.1 mouse_genomes_project 18 71534440 71549808 - MGP_NODShiLtJ_P0049595 Cplx4 protein_coding protein_coding MGP_NODShiLtJ_T0003740.1 MGP_NODShiLtJ_G0003358.1 mouse_genomes_project 18 8483429 8489487 - Mir133a-1hg antisense antisense MGP_NODShiLtJ_T0003750.1 MGP_NODShiLtJ_G0003365.1 mouse_genomes_project 18 38920161 38921361 - Gm37751 antisense antisense MGP_NODShiLtJ_T0048649.1 MGP_NODShiLtJ_G0023962.1 mouse_genomes_project 18 6748144 6752347 - MGP_NODShiLtJ_P0048649 Gjd4 protein_coding protein_coding MGP_NODShiLtJ_T0049074.1 MGP_NODShiLtJ_G0024128.1 mouse_genomes_project 18 38959665 39218915 + MGP_NODShiLtJ_P0049074 Pcdha6 protein_coding protein_coding MGP_NODShiLtJ_T0049075.1 MGP_NODShiLtJ_G0024128.1 mouse_genomes_project 18 38959682 39218646 + MGP_NODShiLtJ_P0049075 Pcdha6 protein_coding protein_coding MGP_NODShiLtJ_T0049076.1 MGP_NODShiLtJ_G0024128.1 mouse_genomes_project 18 38959684 39218411 + MGP_NODShiLtJ_P0049076 Pcdha6 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049201.1 MGP_NODShiLtJ_G0024194.1 mouse_genomes_project 18 40559638 40609617 + MGP_NODShiLtJ_P0049201 Ndfip1 protein_coding protein_coding MGP_NODShiLtJ_T0011703.1 MGP_NODShiLtJ_G0009826.1 mouse_genomes_project 18 39842926 39929362 + MGP_NODShiLtJ_P0011703 Pcdhgb8 polymorphic_pseudogene polymorphic_pseudogene MGP_NODShiLtJ_T0010135.1 MGP_NODShiLtJ_G0008268.1 mouse_genomes_project 18 6103891 6103995 - Gm26119 miRNA miRNA MGP_NODShiLtJ_T0101089.1 MGP_NODShiLtJ_G0039442.1 mouse_genomes_project 18 39729536 39730011 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101090.1 MGP_NODShiLtJ_G0039442.1 mouse_genomes_project 18 39729856 39731276 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0049017.1 MGP_NODShiLtJ_G0024107.1 mouse_genomes_project 18 38439441 38452547 + MGP_NODShiLtJ_P0049017 Slc4a9 protein_coding protein_coding MGP_NODShiLtJ_T0049018.1 MGP_NODShiLtJ_G0024107.1 mouse_genomes_project 18 38439441 38452547 + MGP_NODShiLtJ_P0049018 Slc4a9 protein_coding protein_coding MGP_NODShiLtJ_T0048928.1 MGP_NODShiLtJ_G0024075.1 mouse_genomes_project 18 36378582 36412772 - MGP_NODShiLtJ_P0048928 Gfra3 protein_coding protein_coding MGP_NODShiLtJ_T0049515.1 MGP_NODShiLtJ_G0024316.1 mouse_genomes_project 18 67169369 67240494 + MGP_NODShiLtJ_P0049515 Sh3tc2 protein_coding protein_coding MGP_NODShiLtJ_T0099057.1 MGP_NODShiLtJ_G0037451.1 mouse_genomes_project 18 90921837 90922003 - Gm24720 snRNA snRNA MGP_NODShiLtJ_T0049847.1 MGP_NODShiLtJ_G0024417.1 mouse_genomes_project 18 87274259 87355130 + MGP_NODShiLtJ_P0049847 Pard6g protein_coding protein_coding MGP_NODShiLtJ_T0013234.1 MGP_NODShiLtJ_G0011342.1 mouse_genomes_project 18 60523404 60524410 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003783.1 MGP_NODShiLtJ_G0003389.1 mouse_genomes_project 18 88332488 88333608 + Gm27239 antisense antisense MGP_NODShiLtJ_T0048648.1 MGP_NODShiLtJ_G0023961.1 mouse_genomes_project 18 6677477 6680823 + MGP_NODShiLtJ_P0048648 Fzd8 protein_coding protein_coding MGP_NODShiLtJ_T0011353.1 MGP_NODShiLtJ_G0009486.1 mouse_genomes_project 18 70940623 70940938 + Gm22567 misc_RNA misc_RNA MGP_NODShiLtJ_T0048681.1 MGP_NODShiLtJ_G0023977.1 mouse_genomes_project 18 9761769 9878318 + MGP_NODShiLtJ_P0048681 Cables1 protein_coding protein_coding MGP_NODShiLtJ_T0048682.1 MGP_NODShiLtJ_G0023977.1 mouse_genomes_project 18 9761823 9878324 + MGP_NODShiLtJ_P0048682 Cables1 protein_coding protein_coding MGP_NODShiLtJ_T0049751.1 MGP_NODShiLtJ_G0024383.1 mouse_genomes_project 18 80706148 80706631 + MGP_NODShiLtJ_P0049751 Gm9925 protein_coding protein_coding MGP_NODShiLtJ_T0048738.1 MGP_NODShiLtJ_G0023993.1 mouse_genomes_project 18 12950958 13086295 + MGP_NODShiLtJ_P0048738 Taf4b protein_coding protein_coding MGP_NODShiLtJ_T0048739.1 MGP_NODShiLtJ_G0023993.1 mouse_genomes_project 18 12951380 13084064 + MGP_NODShiLtJ_P0048739 Taf4b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049420.1 MGP_NODShiLtJ_G0024281.1 mouse_genomes_project 18 62614724 62684605 + MGP_NODShiLtJ_P0049420 Slc12a2 protein_coding protein_coding MGP_NODShiLtJ_T0010160.1 MGP_NODShiLtJ_G0008293.1 mouse_genomes_project 18 65243901 65243998 + Gm23576 miRNA miRNA MGP_NODShiLtJ_T0017499.1 MGP_NODShiLtJ_G0015237.1 mouse_genomes_project 18 71900401 71930734 + Gm15958 processed_transcript processed_transcript MGP_NODShiLtJ_T0017500.1 MGP_NODShiLtJ_G0015237.1 mouse_genomes_project 18 71901014 71923422 + Gm15958 processed_transcript processed_transcript MGP_NODShiLtJ_T0013235.1 MGP_NODShiLtJ_G0011343.1 mouse_genomes_project 18 65286732 65287948 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0006963.1 MGP_NODShiLtJ_G0005717.1 mouse_genomes_project 18 39702941 39703794 + 4930517L18Rik lincRNA lincRNA MGP_NODShiLtJ_T0049241.1 MGP_NODShiLtJ_G0024204.1 mouse_genomes_project 18 44540464 44553355 - MGP_NODShiLtJ_P0049241 Grxcr2 protein_coding protein_coding MGP_NODShiLtJ_T0006951.1 MGP_NODShiLtJ_G0005707.1 mouse_genomes_project 18 32898356 32909167 + Gm26658 lincRNA lincRNA MGP_NODShiLtJ_T0100291.1 MGP_NODShiLtJ_G0038685.1 mouse_genomes_project 18 39785570 39785661 + Gm24401 snoRNA snoRNA MGP_NODShiLtJ_T0006954.1 MGP_NODShiLtJ_G0005710.1 mouse_genomes_project 18 33661796 33668724 + Gm26717 lincRNA lincRNA MGP_NODShiLtJ_T0006964.1 MGP_NODShiLtJ_G0005718.1 mouse_genomes_project 18 39732554 39739568 + 3222401L13Rik lincRNA lincRNA MGP_NODShiLtJ_T0006965.1 MGP_NODShiLtJ_G0005718.1 mouse_genomes_project 18 39733010 39736562 + 3222401L13Rik lincRNA lincRNA MGP_NODShiLtJ_T0048740.1 MGP_NODShiLtJ_G0023994.1 mouse_genomes_project 18 13169175 13278399 - MGP_NODShiLtJ_P0048740 Kctd1 protein_coding protein_coding MGP_NODShiLtJ_T0048741.1 MGP_NODShiLtJ_G0023994.1 mouse_genomes_project 18 13169175 13366491 - MGP_NODShiLtJ_P0048741 Kctd1 protein_coding protein_coding MGP_NODShiLtJ_T0049608.1 MGP_NODShiLtJ_G0024348.1 mouse_genomes_project 18 72796498 72947261 + MGP_NODShiLtJ_P0049608 Gnal protein_coding protein_coding MGP_NODShiLtJ_T0049609.1 MGP_NODShiLtJ_G0024348.1 mouse_genomes_project 18 72847699 72947261 + MGP_NODShiLtJ_P0049609 Gnal protein_coding protein_coding MGP_NODShiLtJ_T0100278.1 MGP_NODShiLtJ_G0038672.1 mouse_genomes_project 18 15552392 15552522 + Gm22470 snoRNA snoRNA MGP_NODShiLtJ_T0048768.1 MGP_NODShiLtJ_G0024011.1 mouse_genomes_project 18 20841282 20871061 + MGP_NODShiLtJ_P0048768 Rnf125 protein_coding protein_coding MGP_NODShiLtJ_T0010175.1 MGP_NODShiLtJ_G0008308.1 mouse_genomes_project 18 81645459 81645541 - Gm25594 miRNA miRNA MGP_NODShiLtJ_T0049309.1 MGP_NODShiLtJ_G0024238.1 mouse_genomes_project 18 49585102 49602334 - MGP_NODShiLtJ_P0049309 Ticam2 protein_coding protein_coding MGP_NODShiLtJ_T0049311.1 MGP_NODShiLtJ_G0024238.1 mouse_genomes_project 18 49599013 49602334 - Ticam2 protein_coding retained_intron MGP_NODShiLtJ_T0049622.1 MGP_NODShiLtJ_G0024356.1 mouse_genomes_project 18 73311462 73323795 + MGP_NODShiLtJ_P0049622 Gm17669 protein_coding protein_coding MGP_NODShiLtJ_T0048671.1 MGP_NODShiLtJ_G0023973.1 mouse_genomes_project 18 8336556 8353230 - MGP_NODShiLtJ_P0048671 Abhd3 protein_coding protein_coding MGP_NODShiLtJ_T0048672.1 MGP_NODShiLtJ_G0023973.1 mouse_genomes_project 18 8337200 8403594 - MGP_NODShiLtJ_P0048672 Abhd3 protein_coding protein_coding MGP_NODShiLtJ_T0010141.1 MGP_NODShiLtJ_G0008274.1 mouse_genomes_project 18 9762910 9762988 - Mir1901 miRNA miRNA MGP_NODShiLtJ_T0049118.1 MGP_NODShiLtJ_G0024163.1 mouse_genomes_project 18 39739618 39929365 + MGP_NODShiLtJ_P0049118 Pcdhga1 protein_coding protein_coding MGP_NODShiLtJ_T0049119.1 MGP_NODShiLtJ_G0024163.1 mouse_genomes_project 18 39739618 39742865 + MGP_NODShiLtJ_P0049119 Pcdhga1 protein_coding protein_coding MGP_NODShiLtJ_T0049839.1 MGP_NODShiLtJ_G0024412.1 mouse_genomes_project 18 85007034 85021166 - MGP_NODShiLtJ_P0049839 Siglec15 protein_coding protein_coding MGP_NODShiLtJ_T0048764.1 MGP_NODShiLtJ_G0024009.1 mouse_genomes_project 18 20542223 20606622 - MGP_NODShiLtJ_P0048764 B4galt6 protein_coding protein_coding MGP_NODShiLtJ_T0048876.1 MGP_NODShiLtJ_G0024059.1 mouse_genomes_project 18 34519564 34781015 + MGP_NODShiLtJ_P0048876 Camk4 protein_coding protein_coding MGP_NODShiLtJ_T0049066.1 MGP_NODShiLtJ_G0024123.1 mouse_genomes_project 18 38926387 39218915 + MGP_NODShiLtJ_P0049066 Pcdha2 protein_coding protein_coding MGP_NODShiLtJ_T0049067.1 MGP_NODShiLtJ_G0024123.1 mouse_genomes_project 18 38926406 39218646 + MGP_NODShiLtJ_P0049067 Pcdha2 protein_coding protein_coding MGP_NODShiLtJ_T0013189.1 MGP_NODShiLtJ_G0011297.1 mouse_genomes_project 18 5218650 5219383 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048987.1 MGP_NODShiLtJ_G0024096.1 mouse_genomes_project 18 37497461 37527644 + 1700066B19Rik protein_coding processed_transcript MGP_NODShiLtJ_T0048994.1 MGP_NODShiLtJ_G0024096.1 mouse_genomes_project 18 37524862 37528786 + MGP_NODShiLtJ_P0048994 1700066B19Rik protein_coding protein_coding MGP_NODShiLtJ_T0049314.1 MGP_NODShiLtJ_G0024240.1 mouse_genomes_project 18 49628692 49653912 + MGP_NODShiLtJ_P0049314 Eif1a protein_coding protein_coding MGP_NODShiLtJ_T0049315.1 MGP_NODShiLtJ_G0024240.1 mouse_genomes_project 18 49628696 49651841 + MGP_NODShiLtJ_P0049315 Eif1a protein_coding protein_coding MGP_NODShiLtJ_T0049843.1 MGP_NODShiLtJ_G0024414.1 mouse_genomes_project 18 85123395 85190195 - MGP_NODShiLtJ_P0049843 Slc14a2 protein_coding protein_coding MGP_NODShiLtJ_T0049844.1 MGP_NODShiLtJ_G0024414.1 mouse_genomes_project 18 85161717 85187541 - MGP_NODShiLtJ_P0049844 Slc14a2 protein_coding protein_coding MGP_NODShiLtJ_T0100307.1 MGP_NODShiLtJ_G0038701.1 mouse_genomes_project 18 96434241 96434375 - Gm24987 snoRNA snoRNA MGP_NODShiLtJ_T0010138.1 MGP_NODShiLtJ_G0008271.1 mouse_genomes_project 18 8485464 8485532 - Mir133a-1 miRNA miRNA MGP_NODShiLtJ_T0049549.1 MGP_NODShiLtJ_G0024330.1 mouse_genomes_project 18 69660767 69683612 + MGP_NODShiLtJ_P0049549 St8sia3 protein_coding protein_coding MGP_NODShiLtJ_T0049550.1 MGP_NODShiLtJ_G0024330.1 mouse_genomes_project 18 69673272 69677359 + MGP_NODShiLtJ_P0049550 St8sia3 protein_coding protein_coding MGP_NODShiLtJ_T0049551.1 MGP_NODShiLtJ_G0024330.1 mouse_genomes_project 18 69673453 69677216 + St8sia3 protein_coding processed_transcript MGP_NODShiLtJ_T0049552.1 MGP_NODShiLtJ_G0024330.1 mouse_genomes_project 18 69674084 69677288 + St8sia3 protein_coding retained_intron MGP_NODShiLtJ_T0048745.1 MGP_NODShiLtJ_G0023997.1 mouse_genomes_project 18 14101879 14102672 + MGP_NODShiLtJ_P0048745 Gm10036 protein_coding protein_coding MGP_NODShiLtJ_T0049713.1 MGP_NODShiLtJ_G0024372.1 mouse_genomes_project 18 76483520 76515250 - MGP_NODShiLtJ_P0049713 4930503L19Rik protein_coding protein_coding MGP_NODShiLtJ_T0048711.1 MGP_NODShiLtJ_G0023985.1 mouse_genomes_project 18 10733147 10749077 + MGP_NODShiLtJ_P0048711 Cabyr protein_coding protein_coding MGP_NODShiLtJ_T0048712.1 MGP_NODShiLtJ_G0023985.1 mouse_genomes_project 18 10733170 10749071 + MGP_NODShiLtJ_P0048712 Cabyr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048713.1 MGP_NODShiLtJ_G0023985.1 mouse_genomes_project 18 10733172 10749071 + MGP_NODShiLtJ_P0048713 Cabyr protein_coding protein_coding MGP_NODShiLtJ_T0048714.1 MGP_NODShiLtJ_G0023985.1 mouse_genomes_project 18 10733178 10749073 + MGP_NODShiLtJ_P0048714 Cabyr protein_coding protein_coding MGP_NODShiLtJ_T0048715.1 MGP_NODShiLtJ_G0023985.1 mouse_genomes_project 18 10733178 10749073 + MGP_NODShiLtJ_P0048715 Cabyr protein_coding protein_coding MGP_NODShiLtJ_T0048716.1 MGP_NODShiLtJ_G0023985.1 mouse_genomes_project 18 10733178 10749073 + MGP_NODShiLtJ_P0048716 Cabyr protein_coding protein_coding MGP_NODShiLtJ_T0048859.1 MGP_NODShiLtJ_G0024049.1 mouse_genomes_project 18 33448659 33455299 - MGP_NODShiLtJ_P0048859 Gpr17 protein_coding protein_coding MGP_NODShiLtJ_T0048858.1 MGP_NODShiLtJ_G0024048.1 mouse_genomes_project 18 33434333 33464290 + MGP_NODShiLtJ_P0048858 Lims2 protein_coding protein_coding MGP_NODShiLtJ_T0048860.1 MGP_NODShiLtJ_G0024048.1 mouse_genomes_project 18 33459757 33464365 + MGP_NODShiLtJ_P0048860 Lims2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049035.1 MGP_NODShiLtJ_G0024110.1 mouse_genomes_project 18 38595143 38600370 - MGP_NODShiLtJ_P0049035 Sra1 protein_coding protein_coding MGP_NODShiLtJ_T0049036.1 MGP_NODShiLtJ_G0024110.1 mouse_genomes_project 18 38595708 38599454 - MGP_NODShiLtJ_P0049036 Sra1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049037.1 MGP_NODShiLtJ_G0024110.1 mouse_genomes_project 18 38595734 38599474 - Sra1 protein_coding retained_intron MGP_NODShiLtJ_T0049038.1 MGP_NODShiLtJ_G0024110.1 mouse_genomes_project 18 38595891 38599453 - MGP_NODShiLtJ_P0049038 Sra1 protein_coding protein_coding MGP_NODShiLtJ_T0049039.1 MGP_NODShiLtJ_G0024110.1 mouse_genomes_project 18 38598989 38599444 - Sra1 protein_coding retained_intron MGP_NODShiLtJ_T0049040.1 MGP_NODShiLtJ_G0024110.1 mouse_genomes_project 18 38600333 38610125 - MGP_NODShiLtJ_P0049040 Sra1 protein_coding protein_coding MGP_NODShiLtJ_T0049494.1 MGP_NODShiLtJ_G0024309.1 mouse_genomes_project 18 66674799 66721492 - MGP_NODShiLtJ_P0049494 Arhgef37 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0003759.1 MGP_NODShiLtJ_G0003374.1 mouse_genomes_project 18 39915355 39916547 - Gm29994 antisense antisense MGP_NODShiLtJ_T0013236.1 MGP_NODShiLtJ_G0011344.1 mouse_genomes_project 18 65915392 65915804 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048750.1 MGP_NODShiLtJ_G0024000.1 mouse_genomes_project 18 19685907 19715742 - MGP_NODShiLtJ_P0048750 Dsc2 protein_coding protein_coding MGP_NODShiLtJ_T0048751.1 MGP_NODShiLtJ_G0024000.1 mouse_genomes_project 18 19685907 19715818 - MGP_NODShiLtJ_P0048751 Dsc2 protein_coding protein_coding MGP_NODShiLtJ_T0048752.1 MGP_NODShiLtJ_G0024000.1 mouse_genomes_project 18 19686617 19694374 - MGP_NODShiLtJ_P0048752 Dsc2 protein_coding protein_coding MGP_NODShiLtJ_T0048753.1 MGP_NODShiLtJ_G0024000.1 mouse_genomes_project 18 19686753 19715773 - MGP_NODShiLtJ_P0048753 Dsc2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049613.1 MGP_NODShiLtJ_G0024351.1 mouse_genomes_project 18 73079809 73104621 + MGP_NODShiLtJ_P0049613 Cidea protein_coding protein_coding MGP_NODShiLtJ_T0049406.1 MGP_NODShiLtJ_G0024275.1 mouse_genomes_project 18 61414836 61593157 - MGP_NODShiLtJ_P0049406 March3 protein_coding protein_coding MGP_NODShiLtJ_T0049407.1 MGP_NODShiLtJ_G0024275.1 mouse_genomes_project 18 61429943 61470262 - MGP_NODShiLtJ_P0049407 March3 protein_coding protein_coding MGP_NODShiLtJ_T0049408.1 MGP_NODShiLtJ_G0024275.1 mouse_genomes_project 18 61461920 61593124 - March3 protein_coding retained_intron MGP_NODShiLtJ_T0049103.1 MGP_NODShiLtJ_G0024148.1 mouse_genomes_project 18 39461666 39464517 + MGP_NODShiLtJ_P0049103 Pcdhb10 protein_coding protein_coding MGP_NODShiLtJ_T0100297.1 MGP_NODShiLtJ_G0038691.1 mouse_genomes_project 18 68883773 68883917 + Gm22210 snoRNA snoRNA MGP_NODShiLtJ_T0048686.1 MGP_NODShiLtJ_G0023979.1 mouse_genomes_project 18 10068852 10097859 + MGP_NODShiLtJ_P0048686 Riok3 protein_coding protein_coding MGP_NODShiLtJ_T0013241.1 MGP_NODShiLtJ_G0011349.1 mouse_genomes_project 18 87071336 87072332 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099053.1 MGP_NODShiLtJ_G0037447.1 mouse_genomes_project 18 85539031 85539138 + Gm26430 snRNA snRNA MGP_NODShiLtJ_T0100284.1 MGP_NODShiLtJ_G0038678.1 mouse_genomes_project 18 34164034 34164171 - Gm25826 snoRNA snoRNA MGP_NODShiLtJ_T0049926.1 MGP_NODShiLtJ_G0024439.1 mouse_genomes_project 18 92431891 92452952 + MGP_NODShiLtJ_P0049926 Fam69c protein_coding protein_coding MGP_NODShiLtJ_T0049927.1 MGP_NODShiLtJ_G0024439.1 mouse_genomes_project 18 92432114 92465175 + MGP_NODShiLtJ_P0049927 Fam69c protein_coding protein_coding MGP_NODShiLtJ_T0049928.1 MGP_NODShiLtJ_G0024439.1 mouse_genomes_project 18 92432149 92464149 + Fam69c protein_coding processed_transcript MGP_NODShiLtJ_T0049929.1 MGP_NODShiLtJ_G0024439.1 mouse_genomes_project 18 92432754 92452729 + Fam69c protein_coding processed_transcript MGP_NODShiLtJ_T0049135.1 MGP_NODShiLtJ_G0024174.1 mouse_genomes_project 18 39811012 39929365 + MGP_NODShiLtJ_P0049135 Pcdhgb5 protein_coding protein_coding MGP_NODShiLtJ_T0049136.1 MGP_NODShiLtJ_G0024174.1 mouse_genomes_project 18 39811057 39815487 + Pcdhgb5 protein_coding retained_intron MGP_NODShiLtJ_T0000990.1 MGP_NODShiLtJ_G0000916.1 mouse_genomes_project 18 87660452 87663498 + TEC TEC MGP_NODShiLtJ_T0100305.1 MGP_NODShiLtJ_G0038699.1 mouse_genomes_project 18 86678634 86678755 - Gm25824 snoRNA snoRNA MGP_NODShiLtJ_T0013221.1 MGP_NODShiLtJ_G0011329.1 mouse_genomes_project 18 44842567 44843005 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049297.1 MGP_NODShiLtJ_G0024233.1 mouse_genomes_project 18 48147455 48168992 + Kcnn2 protein_coding processed_transcript MGP_NODShiLtJ_T0049298.1 MGP_NODShiLtJ_G0024233.1 mouse_genomes_project 18 48147600 48618348 + MGP_NODShiLtJ_P0049298 Kcnn2 protein_coding protein_coding MGP_NODShiLtJ_T0049299.1 MGP_NODShiLtJ_G0024233.1 mouse_genomes_project 18 48147600 48618489 + MGP_NODShiLtJ_P0049299 Kcnn2 protein_coding protein_coding MGP_NODShiLtJ_T0049300.1 MGP_NODShiLtJ_G0024233.1 mouse_genomes_project 18 48477719 48597346 + Kcnn2 protein_coding retained_intron MGP_NODShiLtJ_T0049301.1 MGP_NODShiLtJ_G0024233.1 mouse_genomes_project 18 48478061 48512219 + Kcnn2 protein_coding retained_intron MGP_NODShiLtJ_T0049302.1 MGP_NODShiLtJ_G0024233.1 mouse_genomes_project 18 48478404 48601376 + Kcnn2 protein_coding processed_transcript MGP_NODShiLtJ_T0049303.1 MGP_NODShiLtJ_G0024233.1 mouse_genomes_project 18 48478404 48618347 + MGP_NODShiLtJ_P0049303 Kcnn2 protein_coding protein_coding MGP_NODShiLtJ_T0048679.1 MGP_NODShiLtJ_G0023976.1 mouse_genomes_project 18 9526611 9662005 + MGP_NODShiLtJ_P0048679 Rbbp8 protein_coding protein_coding MGP_NODShiLtJ_T0048680.1 MGP_NODShiLtJ_G0023976.1 mouse_genomes_project 18 9550404 9662005 + MGP_NODShiLtJ_P0048680 Rbbp8 protein_coding protein_coding MGP_NODShiLtJ_T0048843.1 MGP_NODShiLtJ_G0024038.1 mouse_genomes_project 18 32314274 32733512 - MGP_NODShiLtJ_P0048843 Rit2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048844.1 MGP_NODShiLtJ_G0024038.1 mouse_genomes_project 18 32315100 32733355 - MGP_NODShiLtJ_P0048844 Rit2 protein_coding protein_coding MGP_NODShiLtJ_T0048845.1 MGP_NODShiLtJ_G0024038.1 mouse_genomes_project 18 32535370 32623361 - Rit2 protein_coding processed_transcript MGP_NODShiLtJ_T0048846.1 MGP_NODShiLtJ_G0024038.1 mouse_genomes_project 18 32615909 32733333 - MGP_NODShiLtJ_P0048846 Rit2 protein_coding protein_coding MGP_NODShiLtJ_T0048781.1 MGP_NODShiLtJ_G0024018.1 mouse_genomes_project 18 22795604 23236569 - MGP_NODShiLtJ_P0048781 Nol4 protein_coding protein_coding MGP_NODShiLtJ_T0048782.1 MGP_NODShiLtJ_G0024018.1 mouse_genomes_project 18 22795614 23020008 - MGP_NODShiLtJ_P0048782 Nol4 protein_coding protein_coding MGP_NODShiLtJ_T0048783.1 MGP_NODShiLtJ_G0024018.1 mouse_genomes_project 18 22795814 23235183 - MGP_NODShiLtJ_P0048783 Nol4 protein_coding protein_coding MGP_NODShiLtJ_T0048784.1 MGP_NODShiLtJ_G0024018.1 mouse_genomes_project 18 22796731 23020008 - MGP_NODShiLtJ_P0048784 Nol4 protein_coding protein_coding MGP_NODShiLtJ_T0048785.1 MGP_NODShiLtJ_G0024018.1 mouse_genomes_project 18 22796957 23236605 - MGP_NODShiLtJ_P0048785 Nol4 protein_coding protein_coding MGP_NODShiLtJ_T0048786.1 MGP_NODShiLtJ_G0024018.1 mouse_genomes_project 18 23082232 23235466 - MGP_NODShiLtJ_P0048786 Nol4 protein_coding protein_coding MGP_NODShiLtJ_T0048787.1 MGP_NODShiLtJ_G0024018.1 mouse_genomes_project 18 23092995 23134717 - Nol4 protein_coding processed_transcript MGP_NODShiLtJ_T0049444.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65714890 65745113 - MGP_NODShiLtJ_P0049444 Synpo protein_coding protein_coding MGP_NODShiLtJ_T0049445.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65714899 65745352 - MGP_NODShiLtJ_P0049445 Synpo protein_coding protein_coding MGP_NODShiLtJ_T0049446.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65714907 65750647 - MGP_NODShiLtJ_P0049446 Synpo protein_coding protein_coding MGP_NODShiLtJ_T0049447.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65714908 65721258 - Synpo protein_coding processed_transcript MGP_NODShiLtJ_T0049448.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65720966 65745013 - MGP_NODShiLtJ_P0049448 Synpo protein_coding protein_coding MGP_NODShiLtJ_T0049449.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65720967 65730935 - MGP_NODShiLtJ_P0049449 Synpo protein_coding protein_coding MGP_NODShiLtJ_T0049450.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65720969 65770230 - MGP_NODShiLtJ_P0049450 Synpo protein_coding protein_coding MGP_NODShiLtJ_T0049451.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65724870 65744100 - MGP_NODShiLtJ_P0049451 Synpo protein_coding protein_coding MGP_NODShiLtJ_T0049452.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65725021 65745039 - Synpo protein_coding processed_transcript MGP_NODShiLtJ_T0049453.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65726640 65782097 - Synpo protein_coding processed_transcript MGP_NODShiLtJ_T0049454.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65750291 65770183 - Synpo protein_coding processed_transcript MGP_NODShiLtJ_T0049455.1 MGP_NODShiLtJ_G0024294.1 mouse_genomes_project 18 65766496 65770183 - Synpo protein_coding processed_transcript MGP_NODShiLtJ_T0013228.1 MGP_NODShiLtJ_G0011336.1 mouse_genomes_project 18 56662000 56662898 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049388.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61127727 61146274 - Aldh7a1 protein_coding processed_transcript MGP_NODShiLtJ_T0049389.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61144140 61198595 - MGP_NODShiLtJ_P0049389 Aldh7a1 protein_coding protein_coding MGP_NODShiLtJ_T0049390.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61146029 61187063 - MGP_NODShiLtJ_P0049390 Aldh7a1 protein_coding protein_coding MGP_NODShiLtJ_T0049391.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61146168 61187044 - MGP_NODShiLtJ_P0049391 Aldh7a1 protein_coding protein_coding MGP_NODShiLtJ_T0049392.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61146174 61186953 - MGP_NODShiLtJ_P0049392 Aldh7a1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049393.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61154111 61159157 - Aldh7a1 protein_coding retained_intron MGP_NODShiLtJ_T0049394.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61158787 61186961 - MGP_NODShiLtJ_P0049394 Aldh7a1 protein_coding protein_coding MGP_NODShiLtJ_T0049395.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61169856 61184160 - Aldh7a1 protein_coding retained_intron MGP_NODShiLtJ_T0049396.1 MGP_NODShiLtJ_G0024271.1 mouse_genomes_project 18 61175121 61186932 - MGP_NODShiLtJ_P0049396 Aldh7a1 protein_coding protein_coding MGP_NODShiLtJ_T0049865.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87540552 87585074 + MGP_NODShiLtJ_P0049865 Pqlc1 protein_coding protein_coding MGP_NODShiLtJ_T0049866.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87540602 87575821 + MGP_NODShiLtJ_P0049866 Pqlc1 protein_coding protein_coding MGP_NODShiLtJ_T0049867.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87544006 87585162 + MGP_NODShiLtJ_P0049867 Pqlc1 protein_coding protein_coding MGP_NODShiLtJ_T0049868.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87544597 87576507 + MGP_NODShiLtJ_P0049868 Pqlc1 protein_coding protein_coding MGP_NODShiLtJ_T0049869.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87545045 87585153 + MGP_NODShiLtJ_P0049869 Pqlc1 protein_coding protein_coding MGP_NODShiLtJ_T0049870.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87545049 87567583 + Pqlc1 protein_coding retained_intron MGP_NODShiLtJ_T0049871.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87545067 87585161 + MGP_NODShiLtJ_P0049871 Pqlc1 protein_coding protein_coding MGP_NODShiLtJ_T0049872.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87545068 87565763 + Pqlc1 protein_coding retained_intron MGP_NODShiLtJ_T0049873.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87545068 87585151 + MGP_NODShiLtJ_P0049873 Pqlc1 protein_coding protein_coding MGP_NODShiLtJ_T0049874.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87545079 87585149 + MGP_NODShiLtJ_P0049874 Pqlc1 protein_coding protein_coding MGP_NODShiLtJ_T0049875.1 MGP_NODShiLtJ_G0024424.1 mouse_genomes_project 18 87551843 87552489 + Pqlc1 protein_coding processed_transcript MGP_NODShiLtJ_T0048574.1 MGP_NODShiLtJ_G0023947.1 mouse_genomes_project 18 1606679 1655141 + MGP_NODShiLtJ_P0048574 9430020K01Rik protein_coding protein_coding MGP_NODShiLtJ_T0048655.1 MGP_NODShiLtJ_G0023968.1 mouse_genomes_project 18 7556938 7593650 - MGP_NODShiLtJ_P0048655 Usp14 protein_coding protein_coding MGP_NODShiLtJ_T0048656.1 MGP_NODShiLtJ_G0023968.1 mouse_genomes_project 18 7557100 7593576 - MGP_NODShiLtJ_P0048656 Usp14 protein_coding protein_coding MGP_NODShiLtJ_T0048657.1 MGP_NODShiLtJ_G0023968.1 mouse_genomes_project 18 7558406 7562039 - Usp14 protein_coding retained_intron MGP_NODShiLtJ_T0048658.1 MGP_NODShiLtJ_G0023968.1 mouse_genomes_project 18 7563290 7570021 - Usp14 protein_coding retained_intron MGP_NODShiLtJ_T0048659.1 MGP_NODShiLtJ_G0023968.1 mouse_genomes_project 18 7570957 7593590 - Usp14 protein_coding retained_intron MGP_NODShiLtJ_T0048660.1 MGP_NODShiLtJ_G0023968.1 mouse_genomes_project 18 7573605 7579770 - Usp14 protein_coding retained_intron MGP_NODShiLtJ_T0048661.1 MGP_NODShiLtJ_G0023968.1 mouse_genomes_project 18 7587659 7593531 - Usp14 protein_coding retained_intron MGP_NODShiLtJ_T0049185.1 MGP_NODShiLtJ_G0024189.1 mouse_genomes_project 18 40294001 40320109 - MGP_NODShiLtJ_P0049185 Pcdh1 protein_coding protein_coding MGP_NODShiLtJ_T0049186.1 MGP_NODShiLtJ_G0024189.1 mouse_genomes_project 18 40296953 40311230 - MGP_NODShiLtJ_P0049186 Pcdh1 protein_coding protein_coding MGP_NODShiLtJ_T0049187.1 MGP_NODShiLtJ_G0024189.1 mouse_genomes_project 18 40304760 40317831 - MGP_NODShiLtJ_P0049187 Pcdh1 protein_coding protein_coding MGP_NODShiLtJ_T0049188.1 MGP_NODShiLtJ_G0024189.1 mouse_genomes_project 18 40304760 40320039 - MGP_NODShiLtJ_P0049188 Pcdh1 protein_coding protein_coding MGP_NODShiLtJ_T0049189.1 MGP_NODShiLtJ_G0024189.1 mouse_genomes_project 18 40311510 40318623 - MGP_NODShiLtJ_P0049189 Pcdh1 protein_coding protein_coding MGP_NODShiLtJ_T0049190.1 MGP_NODShiLtJ_G0024189.1 mouse_genomes_project 18 40311510 40311907 - MGP_NODShiLtJ_P0049190 Pcdh1 protein_coding protein_coding MGP_NODShiLtJ_T0049555.1 MGP_NODShiLtJ_G0024332.1 mouse_genomes_project 18 69885550 69919965 - MGP_NODShiLtJ_P0049555 Fech protein_coding protein_coding MGP_NODShiLtJ_T0006980.1 MGP_NODShiLtJ_G0005729.1 mouse_genomes_project 18 68026446 68031794 - 2700046A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0006981.1 MGP_NODShiLtJ_G0005729.1 mouse_genomes_project 18 68030268 68031826 - 2700046A07Rik lincRNA lincRNA MGP_NODShiLtJ_T0049016.1 MGP_NODShiLtJ_G0024106.1 mouse_genomes_project 18 38415126 38425997 - MGP_NODShiLtJ_P0049016 Hbegf protein_coding protein_coding MGP_NODShiLtJ_T0049814.1 MGP_NODShiLtJ_G0024402.1 mouse_genomes_project 18 83933950 84051654 + MGP_NODShiLtJ_P0049814 Pias2 protein_coding protein_coding MGP_NODShiLtJ_T0049815.1 MGP_NODShiLtJ_G0024402.1 mouse_genomes_project 18 83934565 84042885 + MGP_NODShiLtJ_P0049815 Pias2 protein_coding protein_coding MGP_NODShiLtJ_T0049816.1 MGP_NODShiLtJ_G0024402.1 mouse_genomes_project 18 83934565 84051654 + MGP_NODShiLtJ_P0049816 Pias2 protein_coding protein_coding MGP_NODShiLtJ_T0049421.1 MGP_NODShiLtJ_G0024282.1 mouse_genomes_project 18 62750019 62975244 - MGP_NODShiLtJ_P0049421 Fbn2 protein_coding protein_coding MGP_NODShiLtJ_T0048933.1 MGP_NODShiLtJ_G0024079.1 mouse_genomes_project 18 36472476 36539425 + MGP_NODShiLtJ_P0048933 Kdm3b protein_coding protein_coding MGP_NODShiLtJ_T0048934.1 MGP_NODShiLtJ_G0024079.1 mouse_genomes_project 18 36519679 36537909 + MGP_NODShiLtJ_P0048934 Kdm3b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049774.1 MGP_NODShiLtJ_G0024392.1 mouse_genomes_project 18 81753279 81757311 + MGP_NODShiLtJ_P0049774 BC031181 protein_coding protein_coding MGP_NODShiLtJ_T0006988.1 MGP_NODShiLtJ_G0005736.1 mouse_genomes_project 18 84689972 84693762 - A330094K24Rik lincRNA lincRNA MGP_NODShiLtJ_T0048911.1 MGP_NODShiLtJ_G0024072.1 mouse_genomes_project 18 36282877 36309097 - MGP_NODShiLtJ_P0048911 Brd8 protein_coding protein_coding MGP_NODShiLtJ_T0048912.1 MGP_NODShiLtJ_G0024072.1 mouse_genomes_project 18 36282877 36309097 - MGP_NODShiLtJ_P0048912 Brd8 protein_coding protein_coding MGP_NODShiLtJ_T0048913.1 MGP_NODShiLtJ_G0024072.1 mouse_genomes_project 18 36283877 36309049 - Brd8 protein_coding retained_intron MGP_NODShiLtJ_T0048914.1 MGP_NODShiLtJ_G0024072.1 mouse_genomes_project 18 36283906 36309097 - MGP_NODShiLtJ_P0048914 Brd8 protein_coding protein_coding MGP_NODShiLtJ_T0048915.1 MGP_NODShiLtJ_G0024072.1 mouse_genomes_project 18 36285222 36309097 - MGP_NODShiLtJ_P0048915 Brd8 protein_coding protein_coding MGP_NODShiLtJ_T0048916.1 MGP_NODShiLtJ_G0024072.1 mouse_genomes_project 18 36294343 36309097 - Brd8 protein_coding retained_intron MGP_NODShiLtJ_T0048917.1 MGP_NODShiLtJ_G0024072.1 mouse_genomes_project 18 36295328 36309050 - Brd8 protein_coding processed_transcript MGP_NODShiLtJ_T0048918.1 MGP_NODShiLtJ_G0024072.1 mouse_genomes_project 18 36306417 36309097 - Brd8 protein_coding retained_intron MGP_NODShiLtJ_T0049505.1 MGP_NODShiLtJ_G0024311.1 mouse_genomes_project 18 66879514 66884113 + MGP_NODShiLtJ_P0049505 Il17b protein_coding protein_coding MGP_NODShiLtJ_T0049548.1 MGP_NODShiLtJ_G0024329.1 mouse_genomes_project 18 69074954 69386737 + MGP_NODShiLtJ_P0049548 Wdr7 protein_coding protein_coding MGP_NODShiLtJ_T0049730.1 MGP_NODShiLtJ_G0024376.1 mouse_genomes_project 18 77437732 78839722 - MGP_NODShiLtJ_P0049730 Dcc protein_coding protein_coding MGP_NODShiLtJ_T0049731.1 MGP_NODShiLtJ_G0024376.1 mouse_genomes_project 18 77437984 78839670 - MGP_NODShiLtJ_P0049731 Dcc protein_coding protein_coding MGP_NODShiLtJ_T0049732.1 MGP_NODShiLtJ_G0024376.1 mouse_genomes_project 18 78343486 78839694 - Dcc protein_coding retained_intron MGP_NODShiLtJ_T0049412.1 MGP_NODShiLtJ_G0024277.1 mouse_genomes_project 18 61818682 61990673 + MGP_NODShiLtJ_P0049412 Megf10 protein_coding protein_coding MGP_NODShiLtJ_T0049413.1 MGP_NODShiLtJ_G0024277.1 mouse_genomes_project 18 61829593 61985935 + MGP_NODShiLtJ_P0049413 Megf10 protein_coding protein_coding MGP_NODShiLtJ_T0049948.1 MGP_NODShiLtJ_G0024447.1 mouse_genomes_project 18 98024456 98125712 + MGP_NODShiLtJ_P0049948 Cd226 protein_coding protein_coding MGP_NODShiLtJ_T0049949.1 MGP_NODShiLtJ_G0024447.1 mouse_genomes_project 18 98024523 98124900 + MGP_NODShiLtJ_P0049949 Cd226 protein_coding protein_coding MGP_NODShiLtJ_T0013226.1 MGP_NODShiLtJ_G0011334.1 mouse_genomes_project 18 51972036 51973043 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049734.1 MGP_NODShiLtJ_G0024378.1 mouse_genomes_project 18 80272567 80330291 - MGP_NODShiLtJ_P0049734 Smad4 protein_coding protein_coding MGP_NODShiLtJ_T0049735.1 MGP_NODShiLtJ_G0024378.1 mouse_genomes_project 18 80273555 80312619 - MGP_NODShiLtJ_P0049735 Smad4 protein_coding protein_coding MGP_NODShiLtJ_T0049736.1 MGP_NODShiLtJ_G0024378.1 mouse_genomes_project 18 80273712 80276120 - Smad4 protein_coding processed_transcript MGP_NODShiLtJ_T0049737.1 MGP_NODShiLtJ_G0024378.1 mouse_genomes_project 18 80273766 80283381 - Smad4 protein_coding processed_transcript MGP_NODShiLtJ_T0049738.1 MGP_NODShiLtJ_G0024378.1 mouse_genomes_project 18 80273777 80297122 - Smad4 protein_coding processed_transcript MGP_NODShiLtJ_T0049739.1 MGP_NODShiLtJ_G0024378.1 mouse_genomes_project 18 80293140 80309506 - Smad4 protein_coding processed_transcript MGP_NODShiLtJ_T0049319.1 MGP_NODShiLtJ_G0024244.1 mouse_genomes_project 18 49937208 50002385 + MGP_NODShiLtJ_P0049319 Lvrn protein_coding protein_coding MGP_NODShiLtJ_T0049938.1 MGP_NODShiLtJ_G0024443.1 mouse_genomes_project 18 94408749 94534794 + MGP_NODShiLtJ_P0049938 Neto1 protein_coding protein_coding MGP_NODShiLtJ_T0049848.1 MGP_NODShiLtJ_G0024418.1 mouse_genomes_project 18 87323932 87325518 - MGP_NODShiLtJ_P0049848 protein_coding protein_coding MGP_NODShiLtJ_T0049416.1 MGP_NODShiLtJ_G0024280.1 mouse_genomes_project 18 62247057 62456790 + MGP_NODShiLtJ_P0049416 1700011I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0049417.1 MGP_NODShiLtJ_G0024280.1 mouse_genomes_project 18 62247106 62456790 + MGP_NODShiLtJ_P0049417 1700011I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0049418.1 MGP_NODShiLtJ_G0024280.1 mouse_genomes_project 18 62247159 62281436 + MGP_NODShiLtJ_P0049418 1700011I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0049419.1 MGP_NODShiLtJ_G0024280.1 mouse_genomes_project 18 62277657 62456731 + MGP_NODShiLtJ_P0049419 1700011I03Rik protein_coding protein_coding MGP_NODShiLtJ_T0049443.1 MGP_NODShiLtJ_G0024293.1 mouse_genomes_project 18 65696565 65712717 - MGP_NODShiLtJ_P0049443 Myoz3 protein_coding protein_coding MGP_NODShiLtJ_T0013237.1 MGP_NODShiLtJ_G0011345.1 mouse_genomes_project 18 70055104 70055947 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048575.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 1911674 2118789 + MGP_NODShiLtJ_P0048575 Svil protein_coding protein_coding MGP_NODShiLtJ_T0048576.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 1911701 2055467 + Svil protein_coding retained_intron MGP_NODShiLtJ_T0048577.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 1911839 2055383 + Svil protein_coding retained_intron MGP_NODShiLtJ_T0048578.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 1985521 2043957 + MGP_NODShiLtJ_P0048578 Svil protein_coding protein_coding MGP_NODShiLtJ_T0048579.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 1986326 2118108 + MGP_NODShiLtJ_P0048579 Svil protein_coding protein_coding MGP_NODShiLtJ_T0048580.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 1986644 1995789 + Svil protein_coding processed_transcript MGP_NODShiLtJ_T0048581.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 2029319 2118792 + MGP_NODShiLtJ_P0048581 Svil protein_coding protein_coding MGP_NODShiLtJ_T0048582.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 2035910 2117938 + MGP_NODShiLtJ_P0048582 Svil protein_coding protein_coding MGP_NODShiLtJ_T0048583.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 2035912 2117662 + MGP_NODShiLtJ_P0048583 Svil protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048584.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 2043654 2118786 + MGP_NODShiLtJ_P0048584 Svil protein_coding protein_coding MGP_NODShiLtJ_T0048585.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 2061628 2118789 + MGP_NODShiLtJ_P0048585 Svil protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048586.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 2093116 2094252 + Svil protein_coding retained_intron MGP_NODShiLtJ_T0048587.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 2102401 2116519 + MGP_NODShiLtJ_P0048587 Svil protein_coding protein_coding MGP_NODShiLtJ_T0048588.1 MGP_NODShiLtJ_G0023948.1 mouse_genomes_project 18 2113752 2118716 + Svil protein_coding retained_intron MGP_NODShiLtJ_T0049921.1 MGP_NODShiLtJ_G0024437.1 mouse_genomes_project 18 92286055 92333865 - MGP_NODShiLtJ_P0049921 Cndp1 protein_coding protein_coding MGP_NODShiLtJ_T0049922.1 MGP_NODShiLtJ_G0024437.1 mouse_genomes_project 18 92304875 92333827 - Cndp1 protein_coding retained_intron MGP_NODShiLtJ_T0049923.1 MGP_NODShiLtJ_G0024437.1 mouse_genomes_project 18 92307498 92333727 - Cndp1 protein_coding retained_intron MGP_NODShiLtJ_T0097986.1 MGP_NODShiLtJ_G0036398.1 mouse_genomes_project 18 40491677 40491774 + Gm24690 rRNA rRNA MGP_NODShiLtJ_T0011343.1 MGP_NODShiLtJ_G0009476.1 mouse_genomes_project 18 38745274 38745417 + Vaultrc5 misc_RNA misc_RNA MGP_NODShiLtJ_T0000982.1 MGP_NODShiLtJ_G0000908.1 mouse_genomes_project 18 49089646 49090249 - TEC TEC MGP_NODShiLtJ_T0013232.1 MGP_NODShiLtJ_G0011340.1 mouse_genomes_project 18 60253907 60254885 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048705.1 MGP_NODShiLtJ_G0023983.1 mouse_genomes_project 18 10293400 10563207 + MGP_NODShiLtJ_P0048705 Lama3 protein_coding protein_coding MGP_NODShiLtJ_T0048706.1 MGP_NODShiLtJ_G0023983.1 mouse_genomes_project 18 10293605 10562857 + MGP_NODShiLtJ_P0048706 Lama3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048707.1 MGP_NODShiLtJ_G0023983.1 mouse_genomes_project 18 10474903 10563207 + MGP_NODShiLtJ_P0048707 Lama3 protein_coding protein_coding MGP_NODShiLtJ_T0010174.1 MGP_NODShiLtJ_G0008307.1 mouse_genomes_project 18 76557471 76557575 + Mir6357 miRNA miRNA MGP_NODShiLtJ_T0049106.1 MGP_NODShiLtJ_G0024151.1 mouse_genomes_project 18 39503965 39509007 + MGP_NODShiLtJ_P0049106 Pcdhb13 protein_coding protein_coding MGP_NODShiLtJ_T0003760.1 MGP_NODShiLtJ_G0003375.1 mouse_genomes_project 18 41179407 41179964 - Gm15334 antisense antisense MGP_NODShiLtJ_T0048808.1 MGP_NODShiLtJ_G0024026.1 mouse_genomes_project 18 24494917 24585641 + MGP_NODShiLtJ_P0048808 Galnt1 protein_coding protein_coding MGP_NODShiLtJ_T0048809.1 MGP_NODShiLtJ_G0024026.1 mouse_genomes_project 18 24495340 24585633 + MGP_NODShiLtJ_P0048809 Galnt1 protein_coding protein_coding MGP_NODShiLtJ_T0048810.1 MGP_NODShiLtJ_G0024026.1 mouse_genomes_project 18 24495532 24551299 + MGP_NODShiLtJ_P0048810 Galnt1 protein_coding protein_coding MGP_NODShiLtJ_T0048811.1 MGP_NODShiLtJ_G0024026.1 mouse_genomes_project 18 24524664 24585633 + MGP_NODShiLtJ_P0048811 Galnt1 protein_coding protein_coding MGP_NODShiLtJ_T0048812.1 MGP_NODShiLtJ_G0024026.1 mouse_genomes_project 18 24531495 24565758 + MGP_NODShiLtJ_P0048812 Galnt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048813.1 MGP_NODShiLtJ_G0024026.1 mouse_genomes_project 18 24539532 24569827 + MGP_NODShiLtJ_P0048813 Galnt1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0048814.1 MGP_NODShiLtJ_G0024026.1 mouse_genomes_project 18 24578136 24580992 + Galnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0048815.1 MGP_NODShiLtJ_G0024026.1 mouse_genomes_project 18 24578174 24581312 + Galnt1 protein_coding processed_transcript MGP_NODShiLtJ_T0049121.1 MGP_NODShiLtJ_G0024165.1 mouse_genomes_project 18 39751789 39929365 + MGP_NODShiLtJ_P0049121 Pcdhga3 protein_coding protein_coding MGP_NODShiLtJ_T0097990.1 MGP_NODShiLtJ_G0036402.1 mouse_genomes_project 18 75488933 75489042 + Gm24845 rRNA rRNA MGP_NODShiLtJ_T0048748.1 MGP_NODShiLtJ_G0023999.1 mouse_genomes_project 18 19596508 19655746 - MGP_NODShiLtJ_P0048748 Dsc3 protein_coding protein_coding MGP_NODShiLtJ_T0048749.1 MGP_NODShiLtJ_G0023999.1 mouse_genomes_project 18 19598757 19655574 - MGP_NODShiLtJ_P0048749 Dsc3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049527.1 MGP_NODShiLtJ_G0024325.1 mouse_genomes_project 18 68213422 68243575 + MGP_NODShiLtJ_P0049527 Apcdd1 protein_coding protein_coding MGP_NODShiLtJ_T0049528.1 MGP_NODShiLtJ_G0024325.1 mouse_genomes_project 18 68213424 68242844 + MGP_NODShiLtJ_P0049528 Apcdd1 protein_coding protein_coding MGP_NODShiLtJ_T0049140.1 MGP_NODShiLtJ_G0024177.1 mouse_genomes_project 18 39828373 39929365 + MGP_NODShiLtJ_P0049140 Pcdhga10 protein_coding protein_coding MGP_NODShiLtJ_T0006983.1 MGP_NODShiLtJ_G0005731.1 mouse_genomes_project 18 71514094 71517004 + Raxos1 lincRNA lincRNA MGP_NODShiLtJ_T0049646.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75274336 75502865 + MGP_NODShiLtJ_P0049646 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049647.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75275126 75632630 + MGP_NODShiLtJ_P0049647 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049648.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75275469 75637417 + MGP_NODShiLtJ_P0049648 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049649.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75275472 75631569 + MGP_NODShiLtJ_P0049649 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049650.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75275483 75503530 + MGP_NODShiLtJ_P0049650 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049651.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75275509 75631457 + MGP_NODShiLtJ_P0049651 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049652.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75276701 75631583 + MGP_NODShiLtJ_P0049652 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049653.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75276703 75636305 + MGP_NODShiLtJ_P0049653 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049654.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75276703 75632868 + MGP_NODShiLtJ_P0049654 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049655.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75276735 75631391 + MGP_NODShiLtJ_P0049655 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049656.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75276737 75584035 + MGP_NODShiLtJ_P0049656 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049657.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75276747 75421958 + Tcf4 protein_coding processed_transcript MGP_NODShiLtJ_T0049658.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75276837 75631391 + MGP_NODShiLtJ_P0049658 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049659.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75277160 75580854 + MGP_NODShiLtJ_P0049659 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049660.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75277368 75631418 + MGP_NODShiLtJ_P0049660 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049661.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75278258 75631391 + MGP_NODShiLtJ_P0049661 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049662.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75278304 75288284 + Tcf4 protein_coding processed_transcript MGP_NODShiLtJ_T0049663.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75279213 75503424 + MGP_NODShiLtJ_P0049663 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049664.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75279224 75631631 + MGP_NODShiLtJ_P0049664 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049665.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75279226 75503431 + MGP_NODShiLtJ_P0049665 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049666.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75279477 75631642 + MGP_NODShiLtJ_P0049666 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049667.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75279536 75599620 + Tcf4 protein_coding processed_transcript MGP_NODShiLtJ_T0049668.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75279890 75590129 + MGP_NODShiLtJ_P0049668 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049669.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75348185 75631632 + MGP_NODShiLtJ_P0049669 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049670.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75433495 75584083 + MGP_NODShiLtJ_P0049670 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049671.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75434719 75631438 + MGP_NODShiLtJ_P0049671 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049672.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75434858 75604924 + MGP_NODShiLtJ_P0049672 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049673.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75434980 75599661 + MGP_NODShiLtJ_P0049673 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049674.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75456449 75631447 + MGP_NODShiLtJ_P0049674 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049675.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75456688 75590185 + MGP_NODShiLtJ_P0049675 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049676.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75456736 75631391 + MGP_NODShiLtJ_P0049676 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049677.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75456746 75631470 + MGP_NODShiLtJ_P0049677 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049678.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75456791 75584120 + MGP_NODShiLtJ_P0049678 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049679.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75458130 75590145 + MGP_NODShiLtJ_P0049679 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049680.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75458268 75631315 + MGP_NODShiLtJ_P0049680 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049681.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75458471 75605123 + MGP_NODShiLtJ_P0049681 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049682.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75458494 75461313 + Tcf4 protein_coding retained_intron MGP_NODShiLtJ_T0049683.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75458508 75503470 + Tcf4 protein_coding processed_transcript MGP_NODShiLtJ_T0049684.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75458831 75631453 + MGP_NODShiLtJ_P0049684 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049685.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75458971 75584082 + MGP_NODShiLtJ_P0049685 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049686.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75459151 75580900 + Tcf4 protein_coding retained_intron MGP_NODShiLtJ_T0049687.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75501789 75598417 + Tcf4 protein_coding processed_transcript MGP_NODShiLtJ_T0049688.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75502117 75584161 + Tcf4 protein_coding processed_transcript MGP_NODShiLtJ_T0049689.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533003 75631638 + MGP_NODShiLtJ_P0049689 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049690.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533419 75605071 + MGP_NODShiLtJ_P0049690 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049691.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533460 75623922 + MGP_NODShiLtJ_P0049691 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049692.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533466 75630916 + MGP_NODShiLtJ_P0049692 Tcf4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049693.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533473 75632870 + MGP_NODShiLtJ_P0049693 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049694.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533474 75580990 + Tcf4 protein_coding retained_intron MGP_NODShiLtJ_T0049695.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533474 75538939 + Tcf4 protein_coding retained_intron MGP_NODShiLtJ_T0049696.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533491 75605040 + Tcf4 protein_coding processed_transcript MGP_NODShiLtJ_T0049697.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75533630 75598441 + MGP_NODShiLtJ_P0049697 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049698.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75534229 75604938 + MGP_NODShiLtJ_P0049698 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049699.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75542202 75599608 + MGP_NODShiLtJ_P0049699 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049700.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75557568 75631391 + MGP_NODShiLtJ_P0049700 Tcf4 protein_coding protein_coding MGP_NODShiLtJ_T0049701.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75603839 75607464 + Tcf4 protein_coding retained_intron MGP_NODShiLtJ_T0049702.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75627890 75632870 + Tcf4 protein_coding retained_intron MGP_NODShiLtJ_T0049703.1 MGP_NODShiLtJ_G0024368.1 mouse_genomes_project 18 75630572 75631826 + Tcf4 protein_coding retained_intron MGP_NODShiLtJ_T0048625.1 MGP_NODShiLtJ_G0023955.1 mouse_genomes_project 18 3928582 3955183 + MGP_NODShiLtJ_P0048625 Rab18 protein_coding protein_coding MGP_NODShiLtJ_T0048903.1 MGP_NODShiLtJ_G0024068.1 mouse_genomes_project 18 36111048 36182401 - MGP_NODShiLtJ_P0048903 Fam13b protein_coding protein_coding MGP_NODShiLtJ_T0049521.1 MGP_NODShiLtJ_G0024322.1 mouse_genomes_project 18 67869207 68014927 - MGP_NODShiLtJ_P0049521 Spink13 protein_coding protein_coding MGP_NODShiLtJ_T0013192.1 MGP_NODShiLtJ_G0011300.1 mouse_genomes_project 18 7454708 7455525 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049283.1 MGP_NODShiLtJ_G0024228.1 mouse_genomes_project 18 47086297 47095198 + MGP_NODShiLtJ_P0049283 Npy6r protein_coding protein_coding MGP_NODShiLtJ_T0048754.1 MGP_NODShiLtJ_G0024001.1 mouse_genomes_project 18 19747393 19786987 - MGP_NODShiLtJ_P0048754 Dsc1 protein_coding protein_coding MGP_NODShiLtJ_T0013190.1 MGP_NODShiLtJ_G0011298.1 mouse_genomes_project 18 7266599 7267602 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0048822.1 MGP_NODShiLtJ_G0024030.1 mouse_genomes_project 18 24934266 24971485 + MGP_NODShiLtJ_P0048822 Elp2 protein_coding protein_coding MGP_NODShiLtJ_T0048696.1 MGP_NODShiLtJ_G0023981.1 mouse_genomes_project 18 10135170 10181893 - MGP_NODShiLtJ_P0048696 Npc1 protein_coding protein_coding MGP_NODShiLtJ_T0048697.1 MGP_NODShiLtJ_G0023981.1 mouse_genomes_project 18 10155861 10158032 - Npc1 protein_coding processed_transcript MGP_NODShiLtJ_T0048698.1 MGP_NODShiLtJ_G0023981.1 mouse_genomes_project 18 10163052 10181851 - Npc1 protein_coding retained_intron MGP_NODShiLtJ_T0048699.1 MGP_NODShiLtJ_G0023981.1 mouse_genomes_project 18 10163468 10181819 - Npc1 protein_coding retained_intron MGP_NODShiLtJ_T0048700.1 MGP_NODShiLtJ_G0023981.1 mouse_genomes_project 18 10167320 10169562 - Npc1 protein_coding processed_transcript MGP_NODShiLtJ_T0049366.1 MGP_NODShiLtJ_G0024259.1 mouse_genomes_project 18 56823026 56846941 + MGP_NODShiLtJ_P0049366 Zfp474 protein_coding protein_coding MGP_NODShiLtJ_T0048634.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5145455 5148299 + MGP_NODShiLtJ_P0048634 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048635.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5145676 5208810 + MGP_NODShiLtJ_P0048635 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048636.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5145807 5214897 + MGP_NODShiLtJ_P0048636 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048637.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5145851 5148401 + Wac protein_coding retained_intron MGP_NODShiLtJ_T0048638.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5146140 5193787 + MGP_NODShiLtJ_P0048638 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048639.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5146191 5212743 + MGP_NODShiLtJ_P0048639 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048640.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5146326 5193980 + MGP_NODShiLtJ_P0048640 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048641.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5146347 5182341 + MGP_NODShiLtJ_P0048641 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048642.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5148322 5208317 + MGP_NODShiLtJ_P0048642 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048643.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5182323 5193987 + MGP_NODShiLtJ_P0048643 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048644.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5187351 5194083 + Wac protein_coding retained_intron MGP_NODShiLtJ_T0048645.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5187369 5205330 + MGP_NODShiLtJ_P0048645 Wac protein_coding protein_coding MGP_NODShiLtJ_T0048646.1 MGP_NODShiLtJ_G0023959.1 mouse_genomes_project 18 5204465 5261149 + MGP_NODShiLtJ_P0048646 Wac protein_coding protein_coding MGP_NODShiLtJ_T0049623.1 MGP_NODShiLtJ_G0024357.1 mouse_genomes_project 18 73384999 73411977 - MGP_NODShiLtJ_P0049623 Cep76 protein_coding protein_coding MGP_NODShiLtJ_T0013201.1 MGP_NODShiLtJ_G0011309.1 mouse_genomes_project 18 15318953 15319594 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0101091.1 MGP_NODShiLtJ_G0039443.1 mouse_genomes_project 18 82073455 82082107 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101092.1 MGP_NODShiLtJ_G0039443.1 mouse_genomes_project 18 82073726 82073984 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0101093.1 MGP_NODShiLtJ_G0039443.1 mouse_genomes_project 18 82080464 82082119 - transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0049381.1 MGP_NODShiLtJ_G0024266.1 mouse_genomes_project 18 57749775 57894811 + MGP_NODShiLtJ_P0049381 Prdm6 protein_coding protein_coding MGP_NODShiLtJ_T0049382.1 MGP_NODShiLtJ_G0024266.1 mouse_genomes_project 18 57750258 57895599 + MGP_NODShiLtJ_P0049382 Prdm6 protein_coding protein_coding MGP_NODShiLtJ_T0049383.1 MGP_NODShiLtJ_G0024266.1 mouse_genomes_project 18 57873121 57895599 + MGP_NODShiLtJ_P0049383 Prdm6 protein_coding protein_coding MGP_NODShiLtJ_T0010154.1 MGP_NODShiLtJ_G0008287.1 mouse_genomes_project 18 44908557 44908620 + Gm22697 miRNA miRNA MGP_NODShiLtJ_T0013243.1 MGP_NODShiLtJ_G0011351.1 mouse_genomes_project 18 98473499 98473824 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0049130.1 MGP_NODShiLtJ_G0024171.1 mouse_genomes_project 18 39794388 39929365 + MGP_NODShiLtJ_P0049130 Pcdhga7 protein_coding protein_coding MGP_NODShiLtJ_T0049131.1 MGP_NODShiLtJ_G0024171.1 mouse_genomes_project 18 39794442 39797541 + MGP_NODShiLtJ_P0049131 Pcdhga7 protein_coding protein_coding MGP_NODShiLtJ_T0099035.1 MGP_NODShiLtJ_G0037429.1 mouse_genomes_project 18 40418081 40418184 + Gm23205 snRNA snRNA MGP_NODShiLtJ_T0049851.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465378 87470106 + Gm16286 protein_coding processed_transcript MGP_NODShiLtJ_T0049853.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465411 87471338 + MGP_NODShiLtJ_P0049853 Gm16286 protein_coding protein_coding MGP_NODShiLtJ_T0049854.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465443 87469380 + Gm16286 protein_coding retained_intron MGP_NODShiLtJ_T0049855.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465459 87466392 + Gm16286 protein_coding retained_intron MGP_NODShiLtJ_T0049857.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465480 87471329 + MGP_NODShiLtJ_P0049857 Gm16286 protein_coding protein_coding MGP_NODShiLtJ_T0049859.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465508 87471347 + MGP_NODShiLtJ_P0049859 Gm16286 protein_coding protein_coding MGP_NODShiLtJ_T0049860.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465526 87466300 + Gm16286 protein_coding retained_intron MGP_NODShiLtJ_T0049861.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465531 87466392 + Gm16286 protein_coding retained_intron MGP_NODShiLtJ_T0049862.1 MGP_NODShiLtJ_G0024421.1 mouse_genomes_project 18 87465873 87470100 + Gm16286 protein_coding processed_transcript MGP_NODShiLtJ_T0049404.1 MGP_NODShiLtJ_G0024274.1 mouse_genomes_project 18 61356178 61405280 + MGP_NODShiLtJ_P0049404 Lmnb1 protein_coding protein_coding MGP_NODShiLtJ_T0049405.1 MGP_NODShiLtJ_G0024274.1 mouse_genomes_project 18 61379068 61384073 + Lmnb1 protein_coding retained_intron MGP_NODShiLtJ_T0049432.1 MGP_NODShiLtJ_G0024287.1 mouse_genomes_project 18 64041590 64323649 + MGP_NODShiLtJ_P0049432 Chsy3 protein_coding protein_coding MGP_NODShiLtJ_T0048765.1 MGP_NODShiLtJ_G0024010.1 mouse_genomes_project 18 20695127 20781399 - MGP_NODShiLtJ_P0048765 Trappc8 protein_coding protein_coding MGP_NODShiLtJ_T0048766.1 MGP_NODShiLtJ_G0024010.1 mouse_genomes_project 18 20696122 20781388 - MGP_NODShiLtJ_P0048766 Trappc8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048767.1 MGP_NODShiLtJ_G0024010.1 mouse_genomes_project 18 20726802 20781399 - MGP_NODShiLtJ_P0048767 Trappc8 protein_coding protein_coding MGP_NODShiLtJ_T0049630.1 MGP_NODShiLtJ_G0024361.1 mouse_genomes_project 18 73585237 73688832 + MGP_NODShiLtJ_P0049630 Cep192 protein_coding protein_coding MGP_NODShiLtJ_T0049631.1 MGP_NODShiLtJ_G0024361.1 mouse_genomes_project 18 73585979 73688838 + MGP_NODShiLtJ_P0049631 Cep192 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0100281.1 MGP_NODShiLtJ_G0038675.1 mouse_genomes_project 18 29234568 29234700 + Gm24246 snoRNA snoRNA MGP_NODShiLtJ_T0006960.1 MGP_NODShiLtJ_G0005715.1 mouse_genomes_project 18 36447372 36452218 + 2010110K18Rik lincRNA lincRNA MGP_NODShiLtJ_T0006961.1 MGP_NODShiLtJ_G0005715.1 mouse_genomes_project 18 36447475 36454181 + 2010110K18Rik lincRNA lincRNA MGP_NODShiLtJ_T0049602.1 MGP_NODShiLtJ_G0024345.1 mouse_genomes_project 18 71630942 71900574 - Ccbe1 protein_coding processed_transcript MGP_NODShiLtJ_T0049603.1 MGP_NODShiLtJ_G0024345.1 mouse_genomes_project 18 71642779 71900916 - MGP_NODShiLtJ_P0049603 Ccbe1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049604.1 MGP_NODShiLtJ_G0024345.1 mouse_genomes_project 18 71646891 71900966 - MGP_NODShiLtJ_P0049604 Ccbe1 protein_coding protein_coding MGP_NODShiLtJ_T0049605.1 MGP_NODShiLtJ_G0024345.1 mouse_genomes_project 18 71875950 71911873 - Ccbe1 protein_coding processed_transcript MGP_NODShiLtJ_T0049935.1 MGP_NODShiLtJ_G0024441.1 mouse_genomes_project 18 92700643 92748174 + MGP_NODShiLtJ_P0049935 Fbxo15 protein_coding protein_coding MGP_NODShiLtJ_T0049937.1 MGP_NODShiLtJ_G0024441.1 mouse_genomes_project 18 92717805 92748174 + MGP_NODShiLtJ_P0049937 Fbxo15 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0048947.1 MGP_NODShiLtJ_G0024087.1 mouse_genomes_project 18 37319880 37320249 + MGP_NODShiLtJ_P0048947 Gm5239 protein_coding protein_coding MGP_NODShiLtJ_T0100287.1 MGP_NODShiLtJ_G0038681.1 mouse_genomes_project 18 36650570 36650637 - Gm22200 snoRNA snoRNA MGP_NODShiLtJ_T0010178.1 MGP_NODShiLtJ_G0008311.1 mouse_genomes_project 18 89436762 89436833 - Mir5127 miRNA miRNA MGP_NODShiLtJ_T0048988.1 MGP_NODShiLtJ_G0024097.1 mouse_genomes_project 18 37509338 37520225 - MGP_NODShiLtJ_P0048988 Ecscr protein_coding protein_coding MGP_NODShiLtJ_T0048989.1 MGP_NODShiLtJ_G0024097.1 mouse_genomes_project 18 37509338 37519362 - MGP_NODShiLtJ_P0048989 Ecscr protein_coding protein_coding MGP_NODShiLtJ_T0048990.1 MGP_NODShiLtJ_G0024097.1 mouse_genomes_project 18 37509525 37513528 - MGP_NODShiLtJ_P0048990 Ecscr protein_coding protein_coding MGP_NODShiLtJ_T0048991.1 MGP_NODShiLtJ_G0024097.1 mouse_genomes_project 18 37510012 37513528 - MGP_NODShiLtJ_P0048991 Ecscr protein_coding protein_coding MGP_NODShiLtJ_T0048992.1 MGP_NODShiLtJ_G0024097.1 mouse_genomes_project 18 37513485 37514125 - Ecscr protein_coding processed_transcript MGP_NODShiLtJ_T0048993.1 MGP_NODShiLtJ_G0024097.1 mouse_genomes_project 18 37513752 37520162 - Ecscr protein_coding processed_transcript MGP_NODShiLtJ_T0006989.1 MGP_NODShiLtJ_G0005737.1 mouse_genomes_project 18 88615390 88625205 - 4930594M17Rik lincRNA lincRNA MGP_NODShiLtJ_T0049805.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83839605 83916299 - MGP_NODShiLtJ_P0049805 Katnal2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049806.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83839605 83916256 - MGP_NODShiLtJ_P0049806 Katnal2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049807.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83839842 83916237 - MGP_NODShiLtJ_P0049807 Katnal2 protein_coding protein_coding MGP_NODShiLtJ_T0049808.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83840917 83874069 - Katnal2 protein_coding processed_transcript MGP_NODShiLtJ_T0049809.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83860342 83916309 - MGP_NODShiLtJ_P0049809 Katnal2 protein_coding protein_coding MGP_NODShiLtJ_T0049810.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83868836 83879228 - Katnal2 protein_coding processed_transcript MGP_NODShiLtJ_T0049811.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83869737 83875399 - Katnal2 protein_coding retained_intron MGP_NODShiLtJ_T0049812.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83877237 83916300 - MGP_NODShiLtJ_P0049812 Katnal2 protein_coding protein_coding MGP_NODShiLtJ_T0049813.1 MGP_NODShiLtJ_G0024401.1 mouse_genomes_project 18 83877729 83916311 - MGP_NODShiLtJ_P0049813 Katnal2 protein_coding protein_coding MGP_NODShiLtJ_T0048823.1 MGP_NODShiLtJ_G0024031.1 mouse_genomes_project 18 24987543 25034643 + MGP_NODShiLtJ_P0048823 Mocos protein_coding protein_coding MGP_NODShiLtJ_T0049278.1 MGP_NODShiLtJ_G0024223.1 mouse_genomes_project 18 46899023 46903172 + MGP_NODShiLtJ_P0049278 Spink12 protein_coding protein_coding MGP_NODShiLtJ_T0011357.1 MGP_NODShiLtJ_G0009490.1 mouse_genomes_project 18 84776166 84776519 - Gm23954 misc_RNA misc_RNA MGP_NODShiLtJ_T0099027.1 MGP_NODShiLtJ_G0037421.1 mouse_genomes_project 18 12804315 12804479 - Gm24924 snRNA snRNA MGP_NODShiLtJ_T0049714.1 MGP_NODShiLtJ_G0024373.1 mouse_genomes_project 18 76515223 76541993 + MGP_NODShiLtJ_P0049714 Stard6 protein_coding protein_coding MGP_NODShiLtJ_T0049715.1 MGP_NODShiLtJ_G0024373.1 mouse_genomes_project 18 76515341 76541733 + MGP_NODShiLtJ_P0049715 Stard6 protein_coding protein_coding MGP_NODShiLtJ_T0049716.1 MGP_NODShiLtJ_G0024373.1 mouse_genomes_project 18 76515397 76541741 + MGP_NODShiLtJ_P0049716 Stard6 protein_coding protein_coding MGP_NODShiLtJ_T0049717.1 MGP_NODShiLtJ_G0024373.1 mouse_genomes_project 18 76515435 76541737 + MGP_NODShiLtJ_P0049717 Stard6 protein_coding protein_coding MGP_NODShiLtJ_T0049718.1 MGP_NODShiLtJ_G0024373.1 mouse_genomes_project 18 76515786 76526208 + MGP_NODShiLtJ_P0049718 Stard6 protein_coding protein_coding MGP_NODShiLtJ_T0049719.1 MGP_NODShiLtJ_G0024373.1 mouse_genomes_project 18 76515969 76538908 + MGP_NODShiLtJ_P0049719 Stard6 protein_coding protein_coding MGP_NODShiLtJ_T0049041.1 MGP_NODShiLtJ_G0024111.1 mouse_genomes_project 18 38610337 38614846 + MGP_NODShiLtJ_P0049041 Slc35a4 protein_coding protein_coding MGP_NODShiLtJ_T0049042.1 MGP_NODShiLtJ_G0024111.1 mouse_genomes_project 18 38610350 38614851 + MGP_NODShiLtJ_P0049042 Slc35a4 protein_coding protein_coding MGP_NODShiLtJ_T0049043.1 MGP_NODShiLtJ_G0024111.1 mouse_genomes_project 18 38610367 38612601 + MGP_NODShiLtJ_P0049043 Slc35a4 protein_coding protein_coding MGP_NODShiLtJ_T0049044.1 MGP_NODShiLtJ_G0024111.1 mouse_genomes_project 18 38611278 38614854 + MGP_NODShiLtJ_P0049044 Slc35a4 protein_coding protein_coding MGP_NODShiLtJ_T0049077.1 MGP_NODShiLtJ_G0024129.1 mouse_genomes_project 18 38962039 39920811 + MGP_NODShiLtJ_P0049077 Gm37013 protein_coding protein_coding MGP_NODShiLtJ_T0099031.1 MGP_NODShiLtJ_G0037425.1 mouse_genomes_project 18 34379816 34379923 + Gm26378 snRNA snRNA MGP_NODShiLtJ_T0049195.1 MGP_NODShiLtJ_G0024192.1 mouse_genomes_project 18 40416794 40439479 + MGP_NODShiLtJ_P0049195 Rnf14 protein_coding protein_coding MGP_NODShiLtJ_T0049635.1 MGP_NODShiLtJ_G0024364.1 mouse_genomes_project 18 74135438 74160221 + MGP_NODShiLtJ_P0049635 Rnmt protein_coding protein_coding MGP_NODShiLtJ_T0049636.1 MGP_NODShiLtJ_G0024364.1 mouse_genomes_project 18 74135475 74144385 + MGP_NODShiLtJ_P0049636 Rnmt protein_coding protein_coding MGP_NODShiLtJ_T0049637.1 MGP_NODShiLtJ_G0024364.1 mouse_genomes_project 18 74135481 74150417 + Rnmt protein_coding retained_intron MGP_NODShiLtJ_T0049638.1 MGP_NODShiLtJ_G0024364.1 mouse_genomes_project 18 74135483 74157275 + MGP_NODShiLtJ_P0049638 Rnmt protein_coding protein_coding MGP_NODShiLtJ_T0049639.1 MGP_NODShiLtJ_G0024364.1 mouse_genomes_project 18 74135505 74146650 + MGP_NODShiLtJ_P0049639 Rnmt protein_coding protein_coding MGP_NODShiLtJ_T0049640.1 MGP_NODShiLtJ_G0024364.1 mouse_genomes_project 18 74140080 74141162 + MGP_NODShiLtJ_P0049640 Rnmt protein_coding protein_coding MGP_NODShiLtJ_T0049641.1 MGP_NODShiLtJ_G0024364.1 mouse_genomes_project 18 74152906 74154660 + Rnmt protein_coding retained_intron MGP_NODShiLtJ_T0049642.1 MGP_NODShiLtJ_G0024364.1 mouse_genomes_project 18 74154412 74160220 + Rnmt protein_coding processed_transcript MGP_NODShiLtJ_T0010153.1 MGP_NODShiLtJ_G0008286.1 mouse_genomes_project 18 43856014 43856105 - Gm44476 miRNA miRNA MGP_NODShiLtJ_T0049240.1 MGP_NODShiLtJ_G0024203.1 mouse_genomes_project 18 44429645 44506564 - MGP_NODShiLtJ_P0049240 Prelid2 protein_coding protein_coding MGP_NODShiLtJ_T0049048.1 MGP_NODShiLtJ_G0024115.1 mouse_genomes_project 18 38682740 38684937 - MGP_NODShiLtJ_P0049048 Ndufa2 protein_coding protein_coding MGP_NODShiLtJ_T0048850.1 MGP_NODShiLtJ_G0024042.1 mouse_genomes_project 18 33121458 33215254 + MGP_NODShiLtJ_P0048850 Sap130 protein_coding protein_coding MGP_NODShiLtJ_T0048851.1 MGP_NODShiLtJ_G0024042.1 mouse_genomes_project 18 33121470 33215254 + MGP_NODShiLtJ_P0048851 Sap130 protein_coding protein_coding MGP_NODShiLtJ_T0049506.1 MGP_NODShiLtJ_G0024312.1 mouse_genomes_project 18 66890349 66901377 - MGP_NODShiLtJ_P0049506 Pcyox1l protein_coding protein_coding MGP_NODShiLtJ_T0049507.1 MGP_NODShiLtJ_G0024312.1 mouse_genomes_project 18 66892991 66901355 - MGP_NODShiLtJ_P0049507 Pcyox1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049508.1 MGP_NODShiLtJ_G0024312.1 mouse_genomes_project 18 66896625 66901377 - Pcyox1l protein_coding retained_intron MGP_NODShiLtJ_T0048862.1 MGP_NODShiLtJ_G0024051.1 mouse_genomes_project 18 33569074 33608985 + MGP_NODShiLtJ_P0048862 Iws1 protein_coding protein_coding MGP_NODShiLtJ_T0049109.1 MGP_NODShiLtJ_G0024154.1 mouse_genomes_project 18 39541581 39550660 + MGP_NODShiLtJ_P0049109 Pcdhb16 protein_coding protein_coding MGP_NODShiLtJ_T0049323.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50354848 50402082 - MGP_NODShiLtJ_P0049323 Sema6a protein_coding protein_coding MGP_NODShiLtJ_T0049324.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50365714 50490887 - MGP_NODShiLtJ_P0049324 Sema6a protein_coding protein_coding MGP_NODShiLtJ_T0049325.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50365715 50490925 - MGP_NODShiLtJ_P0049325 Sema6a protein_coding protein_coding MGP_NODShiLtJ_T0049326.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50367884 50490503 - MGP_NODShiLtJ_P0049326 Sema6a protein_coding protein_coding MGP_NODShiLtJ_T0049327.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50367886 50490505 - MGP_NODShiLtJ_P0049327 Sema6a protein_coding protein_coding MGP_NODShiLtJ_T0049328.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50368824 50453052 - MGP_NODShiLtJ_P0049328 Sema6a protein_coding protein_coding MGP_NODShiLtJ_T0049329.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50396528 50490925 - Sema6a protein_coding retained_intron MGP_NODShiLtJ_T0049330.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50396543 50490927 - Sema6a protein_coding retained_intron MGP_NODShiLtJ_T0049331.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50411713 50453030 - MGP_NODShiLtJ_P0049331 Sema6a protein_coding protein_coding MGP_NODShiLtJ_T0049332.1 MGP_NODShiLtJ_G0024247.1 mouse_genomes_project 18 50423496 50490325 - Sema6a protein_coding retained_intron MGP_NODShiLtJ_T0049397.1 MGP_NODShiLtJ_G0024272.1 mouse_genomes_project 18 61187177 61214011 + MGP_NODShiLtJ_P0049397 Phax protein_coding protein_coding MGP_NODShiLtJ_T0049398.1 MGP_NODShiLtJ_G0024272.1 mouse_genomes_project 18 61187327 61205857 + MGP_NODShiLtJ_P0049398 Phax protein_coding protein_coding MGP_NODShiLtJ_T0049399.1 MGP_NODShiLtJ_G0024272.1 mouse_genomes_project 18 61198465 61214534 + MGP_NODShiLtJ_P0049399 Phax protein_coding protein_coding MGP_NODShiLtJ_T0050330.1 MGP_NODShiLtJ_G0024564.1 mouse_genomes_project 19 3007621 3027241 - MGP_NODShiLtJ_P0050330 Slc22a20 protein_coding protein_coding MGP_NODShiLtJ_T0099067.1 MGP_NODShiLtJ_G0037461.1 mouse_genomes_project 19 14283807 14283914 + Gm24319 snRNA snRNA MGP_NODShiLtJ_T0050847.1 MGP_NODShiLtJ_G0024708.1 mouse_genomes_project 19 9201790 9218792 + Ms4a4b protein_coding retained_intron MGP_NODShiLtJ_T0050848.1 MGP_NODShiLtJ_G0024708.1 mouse_genomes_project 19 9201790 9292024 + Ms4a4b protein_coding retained_intron MGP_NODShiLtJ_T0050849.1 MGP_NODShiLtJ_G0024708.1 mouse_genomes_project 19 9201795 9218792 + Ms4a4b protein_coding retained_intron MGP_NODShiLtJ_T0050850.1 MGP_NODShiLtJ_G0024708.1 mouse_genomes_project 19 9201810 9222518 + MGP_NODShiLtJ_P0050850 Ms4a4b protein_coding protein_coding MGP_NODShiLtJ_T0050851.1 MGP_NODShiLtJ_G0024708.1 mouse_genomes_project 19 9220199 9222349 + Ms4a4b protein_coding retained_intron MGP_NODShiLtJ_T0050852.1 MGP_NODShiLtJ_G0024708.1 mouse_genomes_project 19 9220315 9222349 + Ms4a4b protein_coding processed_transcript MGP_NODShiLtJ_T0050853.1 MGP_NODShiLtJ_G0024708.1 mouse_genomes_project 19 9221549 9222349 + Ms4a4b protein_coding retained_intron MGP_NODShiLtJ_T0050309.1 MGP_NODShiLtJ_G0024558.1 mouse_genomes_project 19 2884039 2909432 - MGP_NODShiLtJ_P0050309 Frmd8 protein_coding protein_coding MGP_NODShiLtJ_T0050310.1 MGP_NODShiLtJ_G0024558.1 mouse_genomes_project 19 2896416 2897843 - Frmd8 protein_coding retained_intron MGP_NODShiLtJ_T0050311.1 MGP_NODShiLtJ_G0024558.1 mouse_genomes_project 19 2899344 2907588 - Frmd8 protein_coding retained_intron MGP_NODShiLtJ_T0050312.1 MGP_NODShiLtJ_G0024558.1 mouse_genomes_project 19 2899430 2909397 - MGP_NODShiLtJ_P0050312 Frmd8 protein_coding protein_coding MGP_NODShiLtJ_T0050999.1 MGP_NODShiLtJ_G0024798.1 mouse_genomes_project 19 17535375 17590965 - MGP_NODShiLtJ_P0050999 Ostf1 protein_coding protein_coding MGP_NODShiLtJ_T0051000.1 MGP_NODShiLtJ_G0024798.1 mouse_genomes_project 19 17537039 17590916 - Ostf1 protein_coding retained_intron MGP_NODShiLtJ_T0051001.1 MGP_NODShiLtJ_G0024798.1 mouse_genomes_project 19 17551711 17590894 - Ostf1 protein_coding retained_intron MGP_NODShiLtJ_T0050541.1 MGP_NODShiLtJ_G0024604.1 mouse_genomes_project 19 4121805 4124082 + MGP_NODShiLtJ_P0050541 Ppp1r14b protein_coding protein_coding MGP_NODShiLtJ_T0013268.1 MGP_NODShiLtJ_G0011376.1 mouse_genomes_project 19 24708210 24709197 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0051246.1 MGP_NODShiLtJ_G0024885.1 mouse_genomes_project 19 35143403 35162903 + MGP_NODShiLtJ_P0051246 Lipn protein_coding protein_coding MGP_NODShiLtJ_T0051247.1 MGP_NODShiLtJ_G0024885.1 mouse_genomes_project 19 35143423 35150066 + MGP_NODShiLtJ_P0051247 Lipn protein_coding protein_coding MGP_NODShiLtJ_T0051248.1 MGP_NODShiLtJ_G0024885.1 mouse_genomes_project 19 35143574 35158344 + MGP_NODShiLtJ_P0051248 Lipn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0099082.1 MGP_NODShiLtJ_G0037476.1 mouse_genomes_project 19 50382173 50382277 - Gm24805 snRNA snRNA MGP_NODShiLtJ_T0051608.1 MGP_NODShiLtJ_G0025015.1 mouse_genomes_project 19 47338693 47344831 + MGP_NODShiLtJ_P0051608 Peo1 protein_coding protein_coding MGP_NODShiLtJ_T0051162.1 MGP_NODShiLtJ_G0024853.1 mouse_genomes_project 19 29885015 29908371 + MGP_NODShiLtJ_P0051162 Cd274 protein_coding protein_coding MGP_NODShiLtJ_T0100318.1 MGP_NODShiLtJ_G0038712.1 mouse_genomes_project 19 6102610 6102736 + Snord22 snoRNA snoRNA MGP_NODShiLtJ_T0013265.1 MGP_NODShiLtJ_G0011373.1 mouse_genomes_project 19 17537502 17540361 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003792.1 MGP_NODShiLtJ_G0003395.1 mouse_genomes_project 19 2879915 2885726 + Frmd8os antisense antisense MGP_NODShiLtJ_T0003793.1 MGP_NODShiLtJ_G0003395.1 mouse_genomes_project 19 2882845 2885710 + Frmd8os antisense antisense MGP_NODShiLtJ_T0050946.1 MGP_NODShiLtJ_G0024761.1 mouse_genomes_project 19 11071930 11072884 - MGP_NODShiLtJ_P0050946 Olfr1457 protein_coding protein_coding MGP_NODShiLtJ_T0050030.1 MGP_NODShiLtJ_G0024468.1 mouse_genomes_project 19 855665 862396 + MGP_NODShiLtJ_P0050030 Tbx10 protein_coding protein_coding MGP_NODShiLtJ_T0051645.1 MGP_NODShiLtJ_G0025028.1 mouse_genomes_project 19 48170863 48204148 - MGP_NODShiLtJ_P0051645 Mgea5 protein_coding protein_coding MGP_NODShiLtJ_T0051418.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42597750 42599527 + Entpd1 protein_coding processed_transcript MGP_NODShiLtJ_T0051419.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42597773 42601100 + Entpd1 protein_coding processed_transcript MGP_NODShiLtJ_T0051420.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42597781 42738973 + MGP_NODShiLtJ_P0051420 Entpd1 protein_coding protein_coding MGP_NODShiLtJ_T0051421.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42648298 42740781 + MGP_NODShiLtJ_P0051421 Entpd1 protein_coding protein_coding MGP_NODShiLtJ_T0051422.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42648327 42724234 + MGP_NODShiLtJ_P0051422 Entpd1 protein_coding protein_coding MGP_NODShiLtJ_T0051423.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42648372 42738262 + MGP_NODShiLtJ_P0051423 Entpd1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051424.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42648727 42706074 + Entpd1 protein_coding processed_transcript MGP_NODShiLtJ_T0051425.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42649021 42722317 + Entpd1 protein_coding processed_transcript MGP_NODShiLtJ_T0051426.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42673892 42722413 + Entpd1 protein_coding processed_transcript MGP_NODShiLtJ_T0051427.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42725257 42738934 + MGP_NODShiLtJ_P0051427 Entpd1 protein_coding protein_coding MGP_NODShiLtJ_T0051428.1 MGP_NODShiLtJ_G0024949.1 mouse_genomes_project 19 42735362 42736044 + Entpd1 protein_coding processed_transcript MGP_NODShiLtJ_T0051452.1 MGP_NODShiLtJ_G0024962.1 mouse_genomes_project 19 43814589 43853441 - MGP_NODShiLtJ_P0051452 Arhgap19 protein_coding protein_coding MGP_NODShiLtJ_T0051453.1 MGP_NODShiLtJ_G0024962.1 mouse_genomes_project 19 43814592 43853478 - MGP_NODShiLtJ_P0051453 Arhgap19 protein_coding protein_coding MGP_NODShiLtJ_T0051454.1 MGP_NODShiLtJ_G0024962.1 mouse_genomes_project 19 43817801 43831153 - MGP_NODShiLtJ_P0051454 Arhgap19 protein_coding protein_coding MGP_NODShiLtJ_T0051455.1 MGP_NODShiLtJ_G0024962.1 mouse_genomes_project 19 43817995 43853441 - MGP_NODShiLtJ_P0051455 Arhgap19 protein_coding protein_coding MGP_NODShiLtJ_T0051287.1 MGP_NODShiLtJ_G0024906.1 mouse_genomes_project 19 37994097 38095263 + MGP_NODShiLtJ_P0051287 Hectd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051288.1 MGP_NODShiLtJ_G0024906.1 mouse_genomes_project 19 37994126 38092767 + MGP_NODShiLtJ_P0051288 Hectd2 protein_coding protein_coding MGP_NODShiLtJ_T0051289.1 MGP_NODShiLtJ_G0024906.1 mouse_genomes_project 19 37994127 38032839 + Hectd2 protein_coding retained_intron MGP_NODShiLtJ_T0051290.1 MGP_NODShiLtJ_G0024906.1 mouse_genomes_project 19 37994127 38095266 + MGP_NODShiLtJ_P0051290 Hectd2 protein_coding protein_coding MGP_NODShiLtJ_T0051291.1 MGP_NODShiLtJ_G0024906.1 mouse_genomes_project 19 37994287 38010060 + Hectd2 protein_coding retained_intron MGP_NODShiLtJ_T0051292.1 MGP_NODShiLtJ_G0024906.1 mouse_genomes_project 19 37994318 38088160 + MGP_NODShiLtJ_P0051292 Hectd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051293.1 MGP_NODShiLtJ_G0024906.1 mouse_genomes_project 19 38027175 38088160 + MGP_NODShiLtJ_P0051293 Hectd2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051294.1 MGP_NODShiLtJ_G0024906.1 mouse_genomes_project 19 38052362 38071940 + Hectd2 protein_coding retained_intron MGP_NODShiLtJ_T0050882.1 MGP_NODShiLtJ_G0024717.1 mouse_genomes_project 19 9473026 9506925 - MGP_NODShiLtJ_P0050882 Oosp1 protein_coding protein_coding MGP_NODShiLtJ_T0050883.1 MGP_NODShiLtJ_G0024717.1 mouse_genomes_project 19 9473090 9506803 - MGP_NODShiLtJ_P0050883 Oosp1 protein_coding protein_coding MGP_NODShiLtJ_T0050884.1 MGP_NODShiLtJ_G0024717.1 mouse_genomes_project 19 9473228 9506809 - MGP_NODShiLtJ_P0050884 Oosp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051432.1 MGP_NODShiLtJ_G0024951.1 mouse_genomes_project 19 42896275 42920360 + MGP_NODShiLtJ_P0051432 Zfp518a protein_coding protein_coding MGP_NODShiLtJ_T0051828.1 MGP_NODShiLtJ_G0025092.1 mouse_genomes_project 19 58981686 58990586 + MGP_NODShiLtJ_P0051828 Tectb protein_coding protein_coding MGP_NODShiLtJ_T0051829.1 MGP_NODShiLtJ_G0025092.1 mouse_genomes_project 19 58981689 58995789 + MGP_NODShiLtJ_P0051829 Tectb protein_coding protein_coding MGP_NODShiLtJ_T0051830.1 MGP_NODShiLtJ_G0025092.1 mouse_genomes_project 19 58981838 58997232 + MGP_NODShiLtJ_P0051830 Tectb protein_coding protein_coding MGP_NODShiLtJ_T0051831.1 MGP_NODShiLtJ_G0025092.1 mouse_genomes_project 19 58990498 58995614 + MGP_NODShiLtJ_P0051831 Tectb protein_coding protein_coding MGP_NODShiLtJ_T0051832.1 MGP_NODShiLtJ_G0025092.1 mouse_genomes_project 19 58990550 58991245 + Tectb protein_coding retained_intron MGP_NODShiLtJ_T0051833.1 MGP_NODShiLtJ_G0025092.1 mouse_genomes_project 19 58992953 58997223 + Tectb protein_coding processed_transcript MGP_NODShiLtJ_T0050788.1 MGP_NODShiLtJ_G0024688.1 mouse_genomes_project 19 8533442 8546499 - MGP_NODShiLtJ_P0050788 Tmem132a protein_coding protein_coding MGP_NODShiLtJ_T0050789.1 MGP_NODShiLtJ_G0024688.1 mouse_genomes_project 19 8533454 8546337 - MGP_NODShiLtJ_P0050789 Tmem132a protein_coding protein_coding MGP_NODShiLtJ_T0051084.1 MGP_NODShiLtJ_G0024835.1 mouse_genomes_project 19 25767812 25775665 + MGP_NODShiLtJ_P0051084 Dmrt2 protein_coding protein_coding MGP_NODShiLtJ_T0050689.1 MGP_NODShiLtJ_G0024644.1 mouse_genomes_project 19 6238545 6241670 + MGP_NODShiLtJ_P0050689 Lrrn4cl protein_coding protein_coding MGP_NODShiLtJ_T0050206.1 MGP_NODShiLtJ_G0024522.1 mouse_genomes_project 19 2041547 2047066 - MGP_NODShiLtJ_P0050206 Cnih2 protein_coding protein_coding MGP_NODShiLtJ_T0051245.1 MGP_NODShiLtJ_G0024884.1 mouse_genomes_project 19 35080028 35119805 + MGP_NODShiLtJ_P0051245 Lipk protein_coding protein_coding MGP_NODShiLtJ_T0050152.1 MGP_NODShiLtJ_G0024498.1 mouse_genomes_project 19 1543121 1546223 - MGP_NODShiLtJ_P0050152 Rce1 protein_coding protein_coding MGP_NODShiLtJ_T0010212.1 MGP_NODShiLtJ_G0008345.1 mouse_genomes_project 19 40771566 40771630 - Gm23800 miRNA miRNA MGP_NODShiLtJ_T0050889.1 MGP_NODShiLtJ_G0024721.1 mouse_genomes_project 19 9593011 9642756 - MGP_NODShiLtJ_P0050889 Stx3 protein_coding protein_coding MGP_NODShiLtJ_T0050890.1 MGP_NODShiLtJ_G0024721.1 mouse_genomes_project 19 9593011 9642756 - MGP_NODShiLtJ_P0050890 Stx3 protein_coding protein_coding MGP_NODShiLtJ_T0050891.1 MGP_NODShiLtJ_G0024721.1 mouse_genomes_project 19 9595620 9644966 - MGP_NODShiLtJ_P0050891 Stx3 protein_coding protein_coding MGP_NODShiLtJ_T0100312.1 MGP_NODShiLtJ_G0038706.1 mouse_genomes_project 19 6100995 6101070 + Gm25894 snoRNA snoRNA MGP_NODShiLtJ_T0050729.1 MGP_NODShiLtJ_G0024661.1 mouse_genomes_project 19 7463037 7491361 - MGP_NODShiLtJ_P0050729 Incenp protein_coding protein_coding MGP_NODShiLtJ_T0050989.1 MGP_NODShiLtJ_G0024794.1 mouse_genomes_project 19 15748620 16037259 + MGP_NODShiLtJ_P0050989 Prune2 protein_coding protein_coding MGP_NODShiLtJ_T0050990.1 MGP_NODShiLtJ_G0024794.1 mouse_genomes_project 19 15942175 16037268 + MGP_NODShiLtJ_P0050990 Prune2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051445.1 MGP_NODShiLtJ_G0024959.1 mouse_genomes_project 19 43618669 43622836 + MGP_NODShiLtJ_P0051445 Gm340 protein_coding protein_coding MGP_NODShiLtJ_T0050757.1 MGP_NODShiLtJ_G0024672.1 mouse_genomes_project 19 8023768 8090112 + MGP_NODShiLtJ_P0050757 Syt7 protein_coding protein_coding MGP_NODShiLtJ_T0050758.1 MGP_NODShiLtJ_G0024672.1 mouse_genomes_project 19 8023768 8090112 + MGP_NODShiLtJ_P0050758 Syt7 protein_coding protein_coding MGP_NODShiLtJ_T0050759.1 MGP_NODShiLtJ_G0024672.1 mouse_genomes_project 19 8023768 8090112 + MGP_NODShiLtJ_P0050759 Syt7 protein_coding protein_coding MGP_NODShiLtJ_T0050760.1 MGP_NODShiLtJ_G0024672.1 mouse_genomes_project 19 8024159 8090115 + MGP_NODShiLtJ_P0050760 Syt7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013253.1 MGP_NODShiLtJ_G0011361.1 mouse_genomes_project 19 4922538 4923654 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0051120.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28656392 29100370 - MGP_NODShiLtJ_P0051120 Glis3 protein_coding protein_coding MGP_NODShiLtJ_T0051121.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28659888 28727565 - Glis3 protein_coding processed_transcript MGP_NODShiLtJ_T0051122.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28659905 29099959 - MGP_NODShiLtJ_P0051122 Glis3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051123.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28659967 28702126 - Glis3 protein_coding processed_transcript MGP_NODShiLtJ_T0051124.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28660514 28954360 - Glis3 protein_coding retained_intron MGP_NODShiLtJ_T0051125.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28661492 28683084 - Glis3 protein_coding retained_intron MGP_NODShiLtJ_T0051126.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28754877 29100370 - MGP_NODShiLtJ_P0051126 Glis3 protein_coding protein_coding MGP_NODShiLtJ_T0051127.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28945786 29098983 - MGP_NODShiLtJ_P0051127 Glis3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051128.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28945786 29086099 - MGP_NODShiLtJ_P0051128 Glis3 protein_coding protein_coding MGP_NODShiLtJ_T0051129.1 MGP_NODShiLtJ_G0024842.1 mouse_genomes_project 19 28945786 29098983 - MGP_NODShiLtJ_P0051129 Glis3 protein_coding protein_coding MGP_NODShiLtJ_T0097996.1 MGP_NODShiLtJ_G0036408.1 mouse_genomes_project 19 38728492 38728598 + Gm23918 rRNA rRNA MGP_NODShiLtJ_T0050020.1 MGP_NODShiLtJ_G0024462.1 mouse_genomes_project 19 752137 756026 - MGP_NODShiLtJ_P0050020 Ndufs8 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051436.1 MGP_NODShiLtJ_G0024953.1 mouse_genomes_project 19 43038017 43069846 + MGP_NODShiLtJ_P0051436 Dntt protein_coding protein_coding MGP_NODShiLtJ_T0051437.1 MGP_NODShiLtJ_G0024953.1 mouse_genomes_project 19 43038017 43069846 + MGP_NODShiLtJ_P0051437 Dntt protein_coding protein_coding MGP_NODShiLtJ_T0099078.1 MGP_NODShiLtJ_G0037472.1 mouse_genomes_project 19 44048105 44048204 + Gm23113 snRNA snRNA MGP_NODShiLtJ_T0051748.1 MGP_NODShiLtJ_G0025063.1 mouse_genomes_project 19 49816428 49901646 + MGP_NODShiLtJ_P0051748 Neurl1a protein_coding protein_coding MGP_NODShiLtJ_T0051749.1 MGP_NODShiLtJ_G0025063.1 mouse_genomes_project 19 49868509 49901646 + MGP_NODShiLtJ_P0051749 Neurl1a protein_coding protein_coding MGP_NODShiLtJ_T0051623.1 MGP_NODShiLtJ_G0025022.1 mouse_genomes_project 19 47733712 47929506 + MGP_NODShiLtJ_P0051623 Btrc protein_coding protein_coding MGP_NODShiLtJ_T0051624.1 MGP_NODShiLtJ_G0025022.1 mouse_genomes_project 19 47733712 47929506 + MGP_NODShiLtJ_P0051624 Btrc protein_coding protein_coding MGP_NODShiLtJ_T0051209.1 MGP_NODShiLtJ_G0024867.1 mouse_genomes_project 19 31803616 31807366 + MGP_NODShiLtJ_P0051209 Cstf2t protein_coding protein_coding MGP_NODShiLtJ_T0099071.1 MGP_NODShiLtJ_G0037465.1 mouse_genomes_project 19 25536892 25536996 - Gm26207 snRNA snRNA MGP_NODShiLtJ_T0003809.1 MGP_NODShiLtJ_G0003406.1 mouse_genomes_project 19 29499170 29501655 + 1700018L02Rik antisense antisense MGP_NODShiLtJ_T0100326.1 MGP_NODShiLtJ_G0038720.1 mouse_genomes_project 19 23548396 23548498 + Gm22144 snoRNA snoRNA MGP_NODShiLtJ_T0013279.1 MGP_NODShiLtJ_G0011387.1 mouse_genomes_project 19 49266123 49267439 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0051543.1 MGP_NODShiLtJ_G0024992.1 mouse_genomes_project 19 45978908 45994645 + MGP_NODShiLtJ_P0051543 Cutc protein_coding protein_coding MGP_NODShiLtJ_T0051544.1 MGP_NODShiLtJ_G0024992.1 mouse_genomes_project 19 45979010 45994652 + MGP_NODShiLtJ_P0051544 Cutc protein_coding protein_coding MGP_NODShiLtJ_T0051545.1 MGP_NODShiLtJ_G0024992.1 mouse_genomes_project 19 45979049 45994252 + MGP_NODShiLtJ_P0051545 Cutc protein_coding protein_coding MGP_NODShiLtJ_T0051546.1 MGP_NODShiLtJ_G0024992.1 mouse_genomes_project 19 45990877 45994652 + Cutc protein_coding retained_intron MGP_NODShiLtJ_T0050340.1 MGP_NODShiLtJ_G0024567.1 mouse_genomes_project 19 3110406 3114467 - MGP_NODShiLtJ_P0050340 Mrpl49 protein_coding protein_coding MGP_NODShiLtJ_T0050313.1 MGP_NODShiLtJ_G0024559.1 mouse_genomes_project 19 2911974 2919924 + MGP_NODShiLtJ_P0050313 Slc25a45 protein_coding protein_coding MGP_NODShiLtJ_T0050314.1 MGP_NODShiLtJ_G0024559.1 mouse_genomes_project 19 2912785 2914754 + MGP_NODShiLtJ_P0050314 Slc25a45 protein_coding protein_coding MGP_NODShiLtJ_T0050315.1 MGP_NODShiLtJ_G0024559.1 mouse_genomes_project 19 2912812 2919930 + MGP_NODShiLtJ_P0050315 Slc25a45 protein_coding protein_coding MGP_NODShiLtJ_T0050316.1 MGP_NODShiLtJ_G0024559.1 mouse_genomes_project 19 2912813 2918643 + MGP_NODShiLtJ_P0050316 Slc25a45 protein_coding protein_coding MGP_NODShiLtJ_T0050408.1 MGP_NODShiLtJ_G0024584.1 mouse_genomes_project 19 3317745 3339289 + MGP_NODShiLtJ_P0050408 Atg2a protein_coding protein_coding MGP_NODShiLtJ_T0050409.1 MGP_NODShiLtJ_G0024584.1 mouse_genomes_project 19 3321542 3339249 + MGP_NODShiLtJ_P0050409 Atg2a protein_coding protein_coding MGP_NODShiLtJ_T0050410.1 MGP_NODShiLtJ_G0024584.1 mouse_genomes_project 19 3327123 3327931 + Atg2a protein_coding retained_intron MGP_NODShiLtJ_T0050411.1 MGP_NODShiLtJ_G0024584.1 mouse_genomes_project 19 3332006 3335255 + Atg2a protein_coding retained_intron MGP_NODShiLtJ_T0050412.1 MGP_NODShiLtJ_G0024584.1 mouse_genomes_project 19 3333976 3337086 + Atg2a protein_coding retained_intron MGP_NODShiLtJ_T0010215.1 MGP_NODShiLtJ_G0008348.1 mouse_genomes_project 19 44378614 44378713 + Gm26339 miRNA miRNA MGP_NODShiLtJ_T0050139.1 MGP_NODShiLtJ_G0024493.1 mouse_genomes_project 19 1333534 1348699 - MGP_NODShiLtJ_P0050139 Rhod protein_coding protein_coding MGP_NODShiLtJ_T0050140.1 MGP_NODShiLtJ_G0024493.1 mouse_genomes_project 19 1333742 1348688 - MGP_NODShiLtJ_P0050140 Rhod protein_coding protein_coding MGP_NODShiLtJ_T0050141.1 MGP_NODShiLtJ_G0024493.1 mouse_genomes_project 19 1334302 1334631 - Rhod protein_coding processed_transcript MGP_NODShiLtJ_T0050529.1 MGP_NODShiLtJ_G0024600.1 mouse_genomes_project 19 4061223 4070238 - MGP_NODShiLtJ_P0050529 Kcnk4 protein_coding protein_coding MGP_NODShiLtJ_T0051051.1 MGP_NODShiLtJ_G0024815.1 mouse_genomes_project 19 22976120 23017452 + MGP_NODShiLtJ_P0051051 Klf9 protein_coding protein_coding MGP_NODShiLtJ_T0050380.1 MGP_NODShiLtJ_G0024575.1 mouse_genomes_project 19 3145510 3152306 + MGP_NODShiLtJ_P0050380 Cdca5 protein_coding protein_coding MGP_NODShiLtJ_T0050381.1 MGP_NODShiLtJ_G0024575.1 mouse_genomes_project 19 3146278 3152306 + Cdca5 protein_coding processed_transcript MGP_NODShiLtJ_T0050382.1 MGP_NODShiLtJ_G0024575.1 mouse_genomes_project 19 3146354 3152306 + Cdca5 protein_coding processed_transcript MGP_NODShiLtJ_T0051213.1 MGP_NODShiLtJ_G0024869.1 mouse_genomes_project 19 32814107 32895315 - MGP_NODShiLtJ_P0051213 Asah2 protein_coding protein_coding MGP_NODShiLtJ_T0007054.1 MGP_NODShiLtJ_G0005781.1 mouse_genomes_project 19 57083131 57085212 + 4833407H14Rik lincRNA lincRNA MGP_NODShiLtJ_T0100322.1 MGP_NODShiLtJ_G0038716.1 mouse_genomes_project 19 11905881 11906013 - Gm24124 snoRNA snoRNA MGP_NODShiLtJ_T0051699.1 MGP_NODShiLtJ_G0025038.1 mouse_genomes_project 19 48835068 48842156 + MGP_NODShiLtJ_P0051699 Nfkb2 protein_coding protein_coding MGP_NODShiLtJ_T0051700.1 MGP_NODShiLtJ_G0025038.1 mouse_genomes_project 19 48836026 48842156 + MGP_NODShiLtJ_P0051700 Nfkb2 protein_coding protein_coding MGP_NODShiLtJ_T0100335.1 MGP_NODShiLtJ_G0038729.1 mouse_genomes_project 19 50378251 50378367 + Gm26085 snoRNA snoRNA MGP_NODShiLtJ_T0006996.1 MGP_NODShiLtJ_G0005743.1 mouse_genomes_project 19 2829271 2836254 - Malat1 lincRNA lincRNA MGP_NODShiLtJ_T0006997.1 MGP_NODShiLtJ_G0005743.1 mouse_genomes_project 19 2829272 2831046 - Malat1 lincRNA lincRNA MGP_NODShiLtJ_T0006998.1 MGP_NODShiLtJ_G0005743.1 mouse_genomes_project 19 2829275 2830534 - Malat1 lincRNA lincRNA MGP_NODShiLtJ_T0006999.1 MGP_NODShiLtJ_G0005743.1 mouse_genomes_project 19 2835497 2836253 - Malat1 lincRNA lincRNA MGP_NODShiLtJ_T0007000.1 MGP_NODShiLtJ_G0005743.1 mouse_genomes_project 19 2835524 2836222 - Malat1 lincRNA lincRNA MGP_NODShiLtJ_T0050194.1 MGP_NODShiLtJ_G0024515.1 mouse_genomes_project 19 1970003 1977975 + MGP_NODShiLtJ_P0050194 Slc29a2 protein_coding protein_coding MGP_NODShiLtJ_T0051057.1 MGP_NODShiLtJ_G0024820.1 mouse_genomes_project 19 23639382 23641114 + MGP_NODShiLtJ_P0051057 Gm9938 protein_coding protein_coding MGP_NODShiLtJ_T0051489.1 MGP_NODShiLtJ_G0024973.1 mouse_genomes_project 19 44157063 44169256 - MGP_NODShiLtJ_P0051489 Morn4 protein_coding protein_coding MGP_NODShiLtJ_T0050985.1 MGP_NODShiLtJ_G0024791.1 mouse_genomes_project 19 15112538 15308077 + MGP_NODShiLtJ_P0050985 Gna14 protein_coding protein_coding MGP_NODShiLtJ_T0017580.1 MGP_NODShiLtJ_G0015260.1 mouse_genomes_project 19 64148796 64153460 + Gm4219 processed_transcript processed_transcript MGP_NODShiLtJ_T0051940.1 MGP_NODShiLtJ_G0025115.1 mouse_genomes_project 19 62786267 62799652 + MGP_NODShiLtJ_P0051940 Pnlip protein_coding protein_coding MGP_NODShiLtJ_T0051406.1 MGP_NODShiLtJ_G0024947.1 mouse_genomes_project 19 42531794 42572686 - MGP_NODShiLtJ_P0051406 Aldh18a1 protein_coding protein_coding MGP_NODShiLtJ_T0051407.1 MGP_NODShiLtJ_G0024947.1 mouse_genomes_project 19 42531794 42572592 - MGP_NODShiLtJ_P0051407 Aldh18a1 protein_coding protein_coding MGP_NODShiLtJ_T0051408.1 MGP_NODShiLtJ_G0024947.1 mouse_genomes_project 19 42532688 42536403 - Aldh18a1 protein_coding retained_intron MGP_NODShiLtJ_T0051409.1 MGP_NODShiLtJ_G0024947.1 mouse_genomes_project 19 42534964 42536281 - MGP_NODShiLtJ_P0051409 Aldh18a1 protein_coding protein_coding MGP_NODShiLtJ_T0051410.1 MGP_NODShiLtJ_G0024947.1 mouse_genomes_project 19 42538610 42572646 - Aldh18a1 protein_coding retained_intron MGP_NODShiLtJ_T0051411.1 MGP_NODShiLtJ_G0024947.1 mouse_genomes_project 19 42557305 42572607 - MGP_NODShiLtJ_P0051411 Aldh18a1 protein_coding protein_coding MGP_NODShiLtJ_T0051412.1 MGP_NODShiLtJ_G0024947.1 mouse_genomes_project 19 42560576 42572633 - MGP_NODShiLtJ_P0051412 Aldh18a1 protein_coding protein_coding MGP_NODShiLtJ_T0051413.1 MGP_NODShiLtJ_G0024947.1 mouse_genomes_project 19 42560619 42572605 - MGP_NODShiLtJ_P0051413 Aldh18a1 protein_coding protein_coding MGP_NODShiLtJ_T0099066.1 MGP_NODShiLtJ_G0037460.1 mouse_genomes_project 19 13199141 13199264 - Gm26026 snRNA snRNA MGP_NODShiLtJ_T0051343.1 MGP_NODShiLtJ_G0024924.1 mouse_genomes_project 19 39842170 39894109 - MGP_NODShiLtJ_P0051343 Fra10ac1 protein_coding protein_coding MGP_NODShiLtJ_T0050238.1 MGP_NODShiLtJ_G0024538.1 mouse_genomes_project 19 2449504 2453945 + MGP_NODShiLtJ_P0050238 Fibp protein_coding protein_coding MGP_NODShiLtJ_T0050239.1 MGP_NODShiLtJ_G0024538.1 mouse_genomes_project 19 2449591 2453887 + MGP_NODShiLtJ_P0050239 Fibp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051105.1 MGP_NODShiLtJ_G0024838.1 mouse_genomes_project 19 27487299 27521274 + Vldlr protein_coding retained_intron MGP_NODShiLtJ_T0051106.1 MGP_NODShiLtJ_G0024838.1 mouse_genomes_project 19 27487835 27521381 + MGP_NODShiLtJ_P0051106 Vldlr protein_coding protein_coding MGP_NODShiLtJ_T0051107.1 MGP_NODShiLtJ_G0024838.1 mouse_genomes_project 19 27487835 27505672 + MGP_NODShiLtJ_P0051107 Vldlr protein_coding protein_coding MGP_NODShiLtJ_T0051108.1 MGP_NODShiLtJ_G0024838.1 mouse_genomes_project 19 27488172 27502586 + Vldlr protein_coding processed_transcript MGP_NODShiLtJ_T0051109.1 MGP_NODShiLtJ_G0024838.1 mouse_genomes_project 19 27488172 27525750 + MGP_NODShiLtJ_P0051109 Vldlr protein_coding protein_coding MGP_NODShiLtJ_T0051110.1 MGP_NODShiLtJ_G0024838.1 mouse_genomes_project 19 27488172 27521246 + MGP_NODShiLtJ_P0051110 Vldlr protein_coding protein_coding MGP_NODShiLtJ_T0051111.1 MGP_NODShiLtJ_G0024838.1 mouse_genomes_project 19 27488273 27521282 + MGP_NODShiLtJ_P0051111 Vldlr protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051112.1 MGP_NODShiLtJ_G0024838.1 mouse_genomes_project 19 27509589 27515347 + MGP_NODShiLtJ_P0051112 Vldlr protein_coding protein_coding MGP_NODShiLtJ_T0050748.1 MGP_NODShiLtJ_G0024670.1 mouse_genomes_project 19 7834150 7866446 - MGP_NODShiLtJ_P0050748 Myrf protein_coding protein_coding MGP_NODShiLtJ_T0050749.1 MGP_NODShiLtJ_G0024670.1 mouse_genomes_project 19 7835183 7866446 - Myrf protein_coding retained_intron MGP_NODShiLtJ_T0050750.1 MGP_NODShiLtJ_G0024670.1 mouse_genomes_project 19 7835582 7866443 - MGP_NODShiLtJ_P0050750 Myrf protein_coding protein_coding MGP_NODShiLtJ_T0050751.1 MGP_NODShiLtJ_G0024670.1 mouse_genomes_project 19 7836178 7843178 - MGP_NODShiLtJ_P0050751 Myrf protein_coding protein_coding MGP_NODShiLtJ_T0050752.1 MGP_NODShiLtJ_G0024670.1 mouse_genomes_project 19 7836263 7866302 - MGP_NODShiLtJ_P0050752 Myrf protein_coding protein_coding MGP_NODShiLtJ_T0050753.1 MGP_NODShiLtJ_G0024670.1 mouse_genomes_project 19 7851733 7866446 - Myrf protein_coding retained_intron MGP_NODShiLtJ_T0013272.1 MGP_NODShiLtJ_G0011380.1 mouse_genomes_project 19 29192057 29192327 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0013261.1 MGP_NODShiLtJ_G0011369.1 mouse_genomes_project 19 14036928 14037206 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050856.1 MGP_NODShiLtJ_G0024710.1 mouse_genomes_project 19 9250860 9315488 + MGP_NODShiLtJ_P0050856 Ms4a6b protein_coding protein_coding MGP_NODShiLtJ_T0050857.1 MGP_NODShiLtJ_G0024710.1 mouse_genomes_project 19 9252909 9264635 + MGP_NODShiLtJ_P0050857 Ms4a6b protein_coding protein_coding MGP_NODShiLtJ_T0050858.1 MGP_NODShiLtJ_G0024710.1 mouse_genomes_project 19 9252916 9315486 + MGP_NODShiLtJ_P0050858 Ms4a6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050859.1 MGP_NODShiLtJ_G0024710.1 mouse_genomes_project 19 9252944 9256114 + Ms4a6b protein_coding retained_intron MGP_NODShiLtJ_T0050860.1 MGP_NODShiLtJ_G0024710.1 mouse_genomes_project 19 9255929 9261675 + MGP_NODShiLtJ_P0050860 Ms4a6b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051878.1 MGP_NODShiLtJ_G0025102.1 mouse_genomes_project 19 60432147 60451088 - MGP_NODShiLtJ_P0051878 Dclre1a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051879.1 MGP_NODShiLtJ_G0025102.1 mouse_genomes_project 19 60432149 60450103 - Dclre1a protein_coding retained_intron MGP_NODShiLtJ_T0051880.1 MGP_NODShiLtJ_G0025102.1 mouse_genomes_project 19 60432149 60451162 - MGP_NODShiLtJ_P0051880 Dclre1a protein_coding protein_coding MGP_NODShiLtJ_T0051881.1 MGP_NODShiLtJ_G0025102.1 mouse_genomes_project 19 60432562 60440350 - Dclre1a protein_coding retained_intron MGP_NODShiLtJ_T0051882.1 MGP_NODShiLtJ_G0025102.1 mouse_genomes_project 19 60442976 60444503 - Dclre1a protein_coding processed_transcript MGP_NODShiLtJ_T0051883.1 MGP_NODShiLtJ_G0025102.1 mouse_genomes_project 19 60449805 60450978 - MGP_NODShiLtJ_P0051883 Dclre1a protein_coding protein_coding MGP_NODShiLtJ_T0003822.1 MGP_NODShiLtJ_G0003416.1 mouse_genomes_project 19 57485073 57490701 - Gm16299 antisense antisense MGP_NODShiLtJ_T0010193.1 MGP_NODShiLtJ_G0008326.1 mouse_genomes_project 19 4048713 4048804 - Mir6990 miRNA miRNA MGP_NODShiLtJ_T0051892.1 MGP_NODShiLtJ_G0025106.1 mouse_genomes_project 19 60751231 60795532 + MGP_NODShiLtJ_P0051892 Tdrd1 protein_coding protein_coding MGP_NODShiLtJ_T0051893.1 MGP_NODShiLtJ_G0025106.1 mouse_genomes_project 19 60751297 60795532 + MGP_NODShiLtJ_P0051893 Tdrd1 protein_coding protein_coding MGP_NODShiLtJ_T0051894.1 MGP_NODShiLtJ_G0025106.1 mouse_genomes_project 19 60751308 60795532 + MGP_NODShiLtJ_P0051894 Tdrd1 protein_coding protein_coding MGP_NODShiLtJ_T0051895.1 MGP_NODShiLtJ_G0025106.1 mouse_genomes_project 19 60755734 60795532 + MGP_NODShiLtJ_P0051895 Tdrd1 protein_coding protein_coding MGP_NODShiLtJ_T0013263.1 MGP_NODShiLtJ_G0011371.1 mouse_genomes_project 19 14585490 14586046 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010182.1 MGP_NODShiLtJ_G0008315.1 mouse_genomes_project 19 45400 45464 + Mir6984 miRNA miRNA MGP_NODShiLtJ_T0013281.1 MGP_NODShiLtJ_G0011389.1 mouse_genomes_project 19 60672924 60673272 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050708.1 MGP_NODShiLtJ_G0024652.1 mouse_genomes_project 19 6326705 6328680 - MGP_NODShiLtJ_P0050708 Rom1 protein_coding protein_coding MGP_NODShiLtJ_T0050895.1 MGP_NODShiLtJ_G0024725.1 mouse_genomes_project 19 9812733 9841581 + MGP_NODShiLtJ_P0050895 protein_coding protein_coding MGP_NODShiLtJ_T0051963.1 MGP_NODShiLtJ_G0025129.1 mouse_genomes_project 19 64732484 64734050 - MGP_NODShiLtJ_P0051963 Prlhr protein_coding protein_coding MGP_NODShiLtJ_T0010219.1 MGP_NODShiLtJ_G0008352.1 mouse_genomes_project 19 47117448 47117572 + Mir6405 miRNA miRNA MGP_NODShiLtJ_T0051786.1 MGP_NODShiLtJ_G0025074.1 mouse_genomes_project 19 53066072 53066684 - MGP_NODShiLtJ_P0051786 Rpl13a-ps1 protein_coding protein_coding MGP_NODShiLtJ_T0013264.1 MGP_NODShiLtJ_G0011372.1 mouse_genomes_project 19 14951949 14952962 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007036.1 MGP_NODShiLtJ_G0005769.1 mouse_genomes_project 19 42870179 42875844 + E030044B06Rik lincRNA lincRNA MGP_NODShiLtJ_T0050605.1 MGP_NODShiLtJ_G0024625.1 mouse_genomes_project 19 4829407 4831614 + Hrasls5 protein_coding retained_intron MGP_NODShiLtJ_T0050606.1 MGP_NODShiLtJ_G0024625.1 mouse_genomes_project 19 4829421 4860816 + MGP_NODShiLtJ_P0050606 Hrasls5 protein_coding protein_coding MGP_NODShiLtJ_T0050607.1 MGP_NODShiLtJ_G0024625.1 mouse_genomes_project 19 4829471 4861215 + MGP_NODShiLtJ_P0050607 Hrasls5 protein_coding protein_coding MGP_NODShiLtJ_T0050962.1 MGP_NODShiLtJ_G0024777.1 mouse_genomes_project 19 12077032 12078121 + MGP_NODShiLtJ_P0050962 Olfr1495 protein_coding protein_coding MGP_NODShiLtJ_T0097788.1 MGP_NODShiLtJ_G0036200.1 mouse_genomes_project 19 10977533 10978458 + pseudogene pseudogene MGP_NODShiLtJ_T0051820.1 MGP_NODShiLtJ_G0025087.1 mouse_genomes_project 19 57557735 57599388 + MGP_NODShiLtJ_P0051820 Pdcd4 protein_coding protein_coding MGP_NODShiLtJ_T0051821.1 MGP_NODShiLtJ_G0025087.1 mouse_genomes_project 19 57568868 57599388 + MGP_NODShiLtJ_P0051821 Pdcd4 protein_coding protein_coding MGP_NODShiLtJ_T0051822.1 MGP_NODShiLtJ_G0025087.1 mouse_genomes_project 19 57568868 57599388 + MGP_NODShiLtJ_P0051822 Pdcd4 protein_coding protein_coding MGP_NODShiLtJ_T0050968.1 MGP_NODShiLtJ_G0024783.1 mouse_genomes_project 19 12177954 12188398 + MGP_NODShiLtJ_P0050968 protein_coding protein_coding MGP_NODShiLtJ_T0051274.1 MGP_NODShiLtJ_G0024900.1 mouse_genomes_project 19 35963020 36035251 - MGP_NODShiLtJ_P0051274 Pank1 protein_coding protein_coding MGP_NODShiLtJ_T0051275.1 MGP_NODShiLtJ_G0024900.1 mouse_genomes_project 19 35963021 36033713 - MGP_NODShiLtJ_P0051275 Pank1 protein_coding protein_coding MGP_NODShiLtJ_T0050548.1 MGP_NODShiLtJ_G0024608.1 mouse_genomes_project 19 4141220 4145789 - MGP_NODShiLtJ_P0050548 Nudt22 protein_coding protein_coding MGP_NODShiLtJ_T0050549.1 MGP_NODShiLtJ_G0024608.1 mouse_genomes_project 19 4141220 4145709 - MGP_NODShiLtJ_P0050549 Nudt22 protein_coding protein_coding MGP_NODShiLtJ_T0050550.1 MGP_NODShiLtJ_G0024608.1 mouse_genomes_project 19 4141221 4144558 - Nudt22 protein_coding retained_intron MGP_NODShiLtJ_T0100328.1 MGP_NODShiLtJ_G0038722.1 mouse_genomes_project 19 27997082 27997214 - Gm24782 snoRNA snoRNA MGP_NODShiLtJ_T0050911.1 MGP_NODShiLtJ_G0024741.1 mouse_genomes_project 19 10333377 10369948 - MGP_NODShiLtJ_P0050911 Dtx4 protein_coding protein_coding MGP_NODShiLtJ_T0050236.1 MGP_NODShiLtJ_G0024536.1 mouse_genomes_project 19 2435623 2444836 + MGP_NODShiLtJ_P0050236 Fosl1 protein_coding protein_coding MGP_NODShiLtJ_T0051555.1 MGP_NODShiLtJ_G0024995.1 mouse_genomes_project 19 46196314 46231608 - MGP_NODShiLtJ_P0051555 Cpn1 protein_coding protein_coding MGP_NODShiLtJ_T0051556.1 MGP_NODShiLtJ_G0024995.1 mouse_genomes_project 19 46202920 46209592 - Cpn1 protein_coding retained_intron MGP_NODShiLtJ_T0051392.1 MGP_NODShiLtJ_G0024944.1 mouse_genomes_project 19 42105815 42153347 - MGP_NODShiLtJ_P0051392 Cyp2c70 protein_coding protein_coding MGP_NODShiLtJ_T0051393.1 MGP_NODShiLtJ_G0024944.1 mouse_genomes_project 19 42117585 42153347 - MGP_NODShiLtJ_P0051393 Cyp2c70 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051394.1 MGP_NODShiLtJ_G0024944.1 mouse_genomes_project 19 42118660 42153347 - MGP_NODShiLtJ_P0051394 Cyp2c70 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051395.1 MGP_NODShiLtJ_G0024944.1 mouse_genomes_project 19 42146641 42153394 - Cyp2c70 protein_coding retained_intron MGP_NODShiLtJ_T0051643.1 MGP_NODShiLtJ_G0025027.1 mouse_genomes_project 19 48167646 48169359 - MGP_NODShiLtJ_P0051643 Npm3 protein_coding protein_coding MGP_NODShiLtJ_T0051644.1 MGP_NODShiLtJ_G0025027.1 mouse_genomes_project 19 48168310 48169317 - Npm3 protein_coding retained_intron MGP_NODShiLtJ_T0010226.1 MGP_NODShiLtJ_G0008359.1 mouse_genomes_project 19 56551339 56551440 - Mir6407 miRNA miRNA MGP_NODShiLtJ_T0050301.1 MGP_NODShiLtJ_G0024555.1 mouse_genomes_project 19 2750140 2753765 - MGP_NODShiLtJ_P0050301 Sssca1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050302.1 MGP_NODShiLtJ_G0024555.1 mouse_genomes_project 19 2752354 2753773 - MGP_NODShiLtJ_P0050302 Sssca1 protein_coding protein_coding MGP_NODShiLtJ_T0050303.1 MGP_NODShiLtJ_G0024555.1 mouse_genomes_project 19 2752358 2753712 - Sssca1 protein_coding retained_intron MGP_NODShiLtJ_T0050304.1 MGP_NODShiLtJ_G0024555.1 mouse_genomes_project 19 2752358 2753784 - MGP_NODShiLtJ_P0050304 Sssca1 protein_coding protein_coding MGP_NODShiLtJ_T0050305.1 MGP_NODShiLtJ_G0024555.1 mouse_genomes_project 19 2752462 2753527 - MGP_NODShiLtJ_P0050305 Sssca1 protein_coding protein_coding MGP_NODShiLtJ_T0050306.1 MGP_NODShiLtJ_G0024555.1 mouse_genomes_project 19 2752943 2753751 - Sssca1 protein_coding retained_intron MGP_NODShiLtJ_T0010210.1 MGP_NODShiLtJ_G0008343.1 mouse_genomes_project 19 36147427 36147501 + Mir1950 miRNA miRNA MGP_NODShiLtJ_T0051076.1 MGP_NODShiLtJ_G0024832.1 mouse_genomes_project 19 25308768 25517760 + MGP_NODShiLtJ_P0051076 Kank1 protein_coding protein_coding MGP_NODShiLtJ_T0051077.1 MGP_NODShiLtJ_G0024832.1 mouse_genomes_project 19 25477056 25492536 + Kank1 protein_coding processed_transcript MGP_NODShiLtJ_T0051078.1 MGP_NODShiLtJ_G0024832.1 mouse_genomes_project 19 25489462 25509302 + MGP_NODShiLtJ_P0051078 Kank1 protein_coding protein_coding MGP_NODShiLtJ_T0051079.1 MGP_NODShiLtJ_G0024832.1 mouse_genomes_project 19 25505629 25507894 + Kank1 protein_coding retained_intron MGP_NODShiLtJ_T0013260.1 MGP_NODShiLtJ_G0011368.1 mouse_genomes_project 19 12369443 12370232 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050222.1 MGP_NODShiLtJ_G0024530.1 mouse_genomes_project 19 2339540 2341336 - MGP_NODShiLtJ_P0050222 Banf1 protein_coding protein_coding MGP_NODShiLtJ_T0050223.1 MGP_NODShiLtJ_G0024530.1 mouse_genomes_project 19 2339540 2341038 - MGP_NODShiLtJ_P0050223 Banf1 protein_coding protein_coding MGP_NODShiLtJ_T0007043.1 MGP_NODShiLtJ_G0005775.1 mouse_genomes_project 19 47691901 47700602 - Gm28578 lincRNA lincRNA MGP_NODShiLtJ_T0007044.1 MGP_NODShiLtJ_G0005775.1 mouse_genomes_project 19 47691921 47692667 - Gm28578 lincRNA lincRNA MGP_NODShiLtJ_T0007045.1 MGP_NODShiLtJ_G0005775.1 mouse_genomes_project 19 47697766 47700588 - Gm28578 lincRNA lincRNA MGP_NODShiLtJ_T0050931.1 MGP_NODShiLtJ_G0024748.1 mouse_genomes_project 19 10659284 10696504 - MGP_NODShiLtJ_P0050931 Zfp91 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050933.1 MGP_NODShiLtJ_G0024748.1 mouse_genomes_project 19 10663522 10694299 - MGP_NODShiLtJ_P0050933 Zfp91 protein_coding protein_coding MGP_NODShiLtJ_T0050934.1 MGP_NODShiLtJ_G0024748.1 mouse_genomes_project 19 10667833 10689146 - Zfp91 protein_coding retained_intron MGP_NODShiLtJ_T0007055.1 MGP_NODShiLtJ_G0005782.1 mouse_genomes_project 19 59483854 59550527 - lincRNA lincRNA MGP_NODShiLtJ_T0050333.1 MGP_NODShiLtJ_G0024566.1 mouse_genomes_project 19 3103340 3110489 + MGP_NODShiLtJ_P0050333 Syvn1 protein_coding protein_coding MGP_NODShiLtJ_T0050334.1 MGP_NODShiLtJ_G0024566.1 mouse_genomes_project 19 3103402 3105968 + MGP_NODShiLtJ_P0050334 Syvn1 protein_coding protein_coding MGP_NODShiLtJ_T0050335.1 MGP_NODShiLtJ_G0024566.1 mouse_genomes_project 19 3103426 3110486 + MGP_NODShiLtJ_P0050335 Syvn1 protein_coding protein_coding MGP_NODShiLtJ_T0050336.1 MGP_NODShiLtJ_G0024566.1 mouse_genomes_project 19 3103829 3110488 + Syvn1 protein_coding retained_intron MGP_NODShiLtJ_T0050337.1 MGP_NODShiLtJ_G0024566.1 mouse_genomes_project 19 3103844 3110486 + MGP_NODShiLtJ_P0050337 Syvn1 protein_coding protein_coding MGP_NODShiLtJ_T0050338.1 MGP_NODShiLtJ_G0024566.1 mouse_genomes_project 19 3103849 3106416 + Syvn1 protein_coding retained_intron MGP_NODShiLtJ_T0050339.1 MGP_NODShiLtJ_G0024566.1 mouse_genomes_project 19 3103868 3110486 + MGP_NODShiLtJ_P0050339 Syvn1 protein_coding protein_coding MGP_NODShiLtJ_T0050970.1 MGP_NODShiLtJ_G0024785.1 mouse_genomes_project 19 12259694 12260654 + MGP_NODShiLtJ_P0050970 protein_coding protein_coding MGP_NODShiLtJ_T0050994.1 MGP_NODShiLtJ_G0024796.1 mouse_genomes_project 19 16216216 16223435 + MGP_NODShiLtJ_P0050994 Rfk protein_coding protein_coding MGP_NODShiLtJ_T0050995.1 MGP_NODShiLtJ_G0024796.1 mouse_genomes_project 19 16216741 16221939 + Rfk protein_coding processed_transcript MGP_NODShiLtJ_T0050996.1 MGP_NODShiLtJ_G0024796.1 mouse_genomes_project 19 16219610 16222042 + Rfk protein_coding processed_transcript MGP_NODShiLtJ_T0050797.1 MGP_NODShiLtJ_G0024690.1 mouse_genomes_project 19 8571970 8582272 + MGP_NODShiLtJ_P0050797 Prpf19 protein_coding protein_coding MGP_NODShiLtJ_T0050798.1 MGP_NODShiLtJ_G0024690.1 mouse_genomes_project 19 8572016 8574651 + Prpf19 protein_coding retained_intron MGP_NODShiLtJ_T0050799.1 MGP_NODShiLtJ_G0024690.1 mouse_genomes_project 19 8572021 8575000 + Prpf19 protein_coding retained_intron MGP_NODShiLtJ_T0050800.1 MGP_NODShiLtJ_G0024690.1 mouse_genomes_project 19 8572112 8576107 + Prpf19 protein_coding retained_intron MGP_NODShiLtJ_T0050801.1 MGP_NODShiLtJ_G0024690.1 mouse_genomes_project 19 8572153 8586298 + MGP_NODShiLtJ_P0050801 Prpf19 protein_coding protein_coding MGP_NODShiLtJ_T0050802.1 MGP_NODShiLtJ_G0024690.1 mouse_genomes_project 19 8575384 8582246 + Prpf19 protein_coding processed_transcript MGP_NODShiLtJ_T0050803.1 MGP_NODShiLtJ_G0024690.1 mouse_genomes_project 19 8576108 8579500 + Prpf19 protein_coding retained_intron MGP_NODShiLtJ_T0050804.1 MGP_NODShiLtJ_G0024690.1 mouse_genomes_project 19 8577021 8577733 + Prpf19 protein_coding retained_intron MGP_NODShiLtJ_T0050922.1 MGP_NODShiLtJ_G0024745.1 mouse_genomes_project 19 10557356 10558421 + MGP_NODShiLtJ_P0050922 Olfr1442 protein_coding protein_coding MGP_NODShiLtJ_T0051114.1 MGP_NODShiLtJ_G0024840.1 mouse_genomes_project 19 27667255 27702581 - MGP_NODShiLtJ_P0051114 Pum3 protein_coding protein_coding MGP_NODShiLtJ_T0100338.1 MGP_NODShiLtJ_G0038732.1 mouse_genomes_project 19 65090212 65090331 - Gm26158 snoRNA snoRNA MGP_NODShiLtJ_T0100311.1 MGP_NODShiLtJ_G0038705.1 mouse_genomes_project 19 6100737 6100809 + Gm25855 snoRNA snoRNA MGP_NODShiLtJ_T0051373.1 MGP_NODShiLtJ_G0024934.1 mouse_genomes_project 19 41052392 41129347 + MGP_NODShiLtJ_P0051373 Cyp2c29 protein_coding protein_coding MGP_NODShiLtJ_T0051374.1 MGP_NODShiLtJ_G0024934.1 mouse_genomes_project 19 41076826 41129398 + MGP_NODShiLtJ_P0051374 Cyp2c29 protein_coding protein_coding MGP_NODShiLtJ_T0051375.1 MGP_NODShiLtJ_G0024934.1 mouse_genomes_project 19 41076826 41129412 + MGP_NODShiLtJ_P0051375 Cyp2c29 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050602.1 MGP_NODShiLtJ_G0024624.1 mouse_genomes_project 19 4813526 4824060 - MGP_NODShiLtJ_P0050602 Lgals12 protein_coding protein_coding MGP_NODShiLtJ_T0050603.1 MGP_NODShiLtJ_G0024624.1 mouse_genomes_project 19 4813527 4824045 - MGP_NODShiLtJ_P0050603 Lgals12 protein_coding protein_coding MGP_NODShiLtJ_T0050604.1 MGP_NODShiLtJ_G0024624.1 mouse_genomes_project 19 4813580 4823970 - MGP_NODShiLtJ_P0050604 Lgals12 protein_coding protein_coding MGP_NODShiLtJ_T0007026.1 MGP_NODShiLtJ_G0005761.1 mouse_genomes_project 19 33236255 33238223 + 2700046G09Rik lincRNA lincRNA MGP_NODShiLtJ_T0051024.1 MGP_NODShiLtJ_G0024806.1 mouse_genomes_project 19 20247420 20286831 - MGP_NODShiLtJ_P0051024 Aldh1a7 protein_coding protein_coding MGP_NODShiLtJ_T0013259.1 MGP_NODShiLtJ_G0011367.1 mouse_genomes_project 19 10451536 10452128 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050514.1 MGP_NODShiLtJ_G0024595.1 mouse_genomes_project 19 3974444 3988023 - MGP_NODShiLtJ_P0050514 Ccdc88b protein_coding protein_coding MGP_NODShiLtJ_T0050331.1 MGP_NODShiLtJ_G0024565.1 mouse_genomes_project 19 3029643 3065753 - MGP_NODShiLtJ_P0050331 Capn1 protein_coding protein_coding MGP_NODShiLtJ_T0050332.1 MGP_NODShiLtJ_G0024565.1 mouse_genomes_project 19 3029643 3065175 - MGP_NODShiLtJ_P0050332 Capn1 protein_coding protein_coding MGP_NODShiLtJ_T0003823.1 MGP_NODShiLtJ_G0003417.1 mouse_genomes_project 19 60252864 60254843 + Gm17197 antisense antisense MGP_NODShiLtJ_T0050255.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2471162 2478410 - MGP_NODShiLtJ_P0050255 Mus81 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050256.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2471649 2478796 - MGP_NODShiLtJ_P0050256 Mus81 protein_coding protein_coding MGP_NODShiLtJ_T0050257.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2471668 2478329 - Mus81 protein_coding retained_intron MGP_NODShiLtJ_T0050258.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2471670 2474357 - Mus81 protein_coding retained_intron MGP_NODShiLtJ_T0050259.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2471671 2474361 - Mus81 protein_coding retained_intron MGP_NODShiLtJ_T0050260.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2471675 2478679 - MGP_NODShiLtJ_P0050260 Mus81 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050261.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2471780 2478516 - MGP_NODShiLtJ_P0050261 Mus81 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050262.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2472507 2475279 - Mus81 protein_coding retained_intron MGP_NODShiLtJ_T0050263.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2472850 2473584 - Mus81 protein_coding retained_intron MGP_NODShiLtJ_T0050264.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2474605 2476204 - Mus81 protein_coding processed_transcript MGP_NODShiLtJ_T0050265.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2475881 2478660 - MGP_NODShiLtJ_P0050265 Mus81 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050266.1 MGP_NODShiLtJ_G0024541.1 mouse_genomes_project 19 2477861 2478705 - Mus81 protein_coding retained_intron MGP_NODShiLtJ_T0050551.1 MGP_NODShiLtJ_G0024609.1 mouse_genomes_project 19 4145802 4148716 + MGP_NODShiLtJ_P0050551 Trpt1 protein_coding protein_coding MGP_NODShiLtJ_T0007037.1 MGP_NODShiLtJ_G0005770.1 mouse_genomes_project 19 45814604 45816155 - Gm20467 lincRNA lincRNA MGP_NODShiLtJ_T0051491.1 MGP_NODShiLtJ_G0024975.1 mouse_genomes_project 19 44209920 44215707 - MGP_NODShiLtJ_P0051491 Avpi1 protein_coding protein_coding MGP_NODShiLtJ_T0051492.1 MGP_NODShiLtJ_G0024975.1 mouse_genomes_project 19 44211426 44215637 - MGP_NODShiLtJ_P0051492 Avpi1 protein_coding protein_coding MGP_NODShiLtJ_T0051234.1 MGP_NODShiLtJ_G0024875.1 mouse_genomes_project 19 34073145 34349247 - MGP_NODShiLtJ_P0051234 Rnls protein_coding protein_coding MGP_NODShiLtJ_T0051235.1 MGP_NODShiLtJ_G0024875.1 mouse_genomes_project 19 34073145 34349277 - MGP_NODShiLtJ_P0051235 Rnls protein_coding protein_coding MGP_NODShiLtJ_T0051495.1 MGP_NODShiLtJ_G0024977.1 mouse_genomes_project 19 44257318 44272050 + Zfyve27 protein_coding retained_intron MGP_NODShiLtJ_T0051496.1 MGP_NODShiLtJ_G0024977.1 mouse_genomes_project 19 44263927 44289361 + MGP_NODShiLtJ_P0051496 Zfyve27 protein_coding protein_coding MGP_NODShiLtJ_T0051497.1 MGP_NODShiLtJ_G0024977.1 mouse_genomes_project 19 44263954 44286061 + MGP_NODShiLtJ_P0051497 Zfyve27 protein_coding protein_coding MGP_NODShiLtJ_T0051498.1 MGP_NODShiLtJ_G0024977.1 mouse_genomes_project 19 44264060 44266567 + Zfyve27 protein_coding retained_intron MGP_NODShiLtJ_T0051499.1 MGP_NODShiLtJ_G0024977.1 mouse_genomes_project 19 44273138 44278475 + MGP_NODShiLtJ_P0051499 Zfyve27 protein_coding protein_coding MGP_NODShiLtJ_T0051500.1 MGP_NODShiLtJ_G0024977.1 mouse_genomes_project 19 44277800 44279144 + Zfyve27 protein_coding retained_intron MGP_NODShiLtJ_T0051501.1 MGP_NODShiLtJ_G0024977.1 mouse_genomes_project 19 44279650 44284858 + Zfyve27 protein_coding retained_intron MGP_NODShiLtJ_T0051502.1 MGP_NODShiLtJ_G0024977.1 mouse_genomes_project 19 44279924 44285238 + Zfyve27 protein_coding retained_intron MGP_NODShiLtJ_T0050552.1 MGP_NODShiLtJ_G0024610.1 mouse_genomes_project 19 4148629 4177942 - MGP_NODShiLtJ_P0050552 Fermt3 protein_coding protein_coding MGP_NODShiLtJ_T0097999.1 MGP_NODShiLtJ_G0036411.1 mouse_genomes_project 19 50946839 50946950 - Gm23857 rRNA rRNA MGP_NODShiLtJ_T0051712.1 MGP_NODShiLtJ_G0025044.1 mouse_genomes_project 19 48937205 49040369 + MGP_NODShiLtJ_P0051712 Sufu protein_coding protein_coding MGP_NODShiLtJ_T0051713.1 MGP_NODShiLtJ_G0025044.1 mouse_genomes_project 19 48937227 49037603 + MGP_NODShiLtJ_P0051713 Sufu protein_coding protein_coding MGP_NODShiLtJ_T0051714.1 MGP_NODShiLtJ_G0025044.1 mouse_genomes_project 19 48937313 49004590 + MGP_NODShiLtJ_P0051714 Sufu protein_coding protein_coding MGP_NODShiLtJ_T0051715.1 MGP_NODShiLtJ_G0025044.1 mouse_genomes_project 19 48937335 49028485 + MGP_NODShiLtJ_P0051715 Sufu protein_coding protein_coding MGP_NODShiLtJ_T0051716.1 MGP_NODShiLtJ_G0025044.1 mouse_genomes_project 19 49006788 49027186 + Sufu protein_coding processed_transcript MGP_NODShiLtJ_T0051717.1 MGP_NODShiLtJ_G0025044.1 mouse_genomes_project 19 49034645 49037537 + Sufu protein_coding retained_intron MGP_NODShiLtJ_T0017569.1 MGP_NODShiLtJ_G0015257.1 mouse_genomes_project 19 38073594 38185103 - 1500017E21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017570.1 MGP_NODShiLtJ_G0015257.1 mouse_genomes_project 19 38091937 38167374 - 1500017E21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017571.1 MGP_NODShiLtJ_G0015257.1 mouse_genomes_project 19 38091949 38100143 - 1500017E21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017572.1 MGP_NODShiLtJ_G0015257.1 mouse_genomes_project 19 38091954 38100123 - 1500017E21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017573.1 MGP_NODShiLtJ_G0015257.1 mouse_genomes_project 19 38118785 38134505 - 1500017E21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017574.1 MGP_NODShiLtJ_G0015257.1 mouse_genomes_project 19 38120922 38167168 - 1500017E21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017575.1 MGP_NODShiLtJ_G0015257.1 mouse_genomes_project 19 38134348 38167227 - 1500017E21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017576.1 MGP_NODShiLtJ_G0015257.1 mouse_genomes_project 19 38134517 38167223 - 1500017E21Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0050723.1 MGP_NODShiLtJ_G0024657.1 mouse_genomes_project 19 6396199 6481729 + MGP_NODShiLtJ_P0050723 Ahnak protein_coding protein_coding MGP_NODShiLtJ_T0050724.1 MGP_NODShiLtJ_G0024657.1 mouse_genomes_project 19 6396199 6422857 + MGP_NODShiLtJ_P0050724 Ahnak protein_coding protein_coding MGP_NODShiLtJ_T0051618.1 MGP_NODShiLtJ_G0025019.1 mouse_genomes_project 19 47414438 47418492 + MGP_NODShiLtJ_P0051618 Kazald1 protein_coding protein_coding MGP_NODShiLtJ_T0051619.1 MGP_NODShiLtJ_G0025019.1 mouse_genomes_project 19 47415336 47418492 + MGP_NODShiLtJ_P0051619 Kazald1 protein_coding protein_coding MGP_NODShiLtJ_T0007031.1 MGP_NODShiLtJ_G0005765.1 mouse_genomes_project 19 37192585 37285844 - A830019P07Rik lincRNA lincRNA MGP_NODShiLtJ_T0050861.1 MGP_NODShiLtJ_G0024711.1 mouse_genomes_project 19 9268194 9291771 + protein_coding processed_transcript MGP_NODShiLtJ_T0050862.1 MGP_NODShiLtJ_G0024711.1 mouse_genomes_project 19 9268296 9269433 + protein_coding processed_transcript MGP_NODShiLtJ_T0050863.1 MGP_NODShiLtJ_G0024711.1 mouse_genomes_project 19 9268365 9269322 + protein_coding retained_intron MGP_NODShiLtJ_T0050864.1 MGP_NODShiLtJ_G0024711.1 mouse_genomes_project 19 9275231 9297536 + MGP_NODShiLtJ_P0050864 protein_coding protein_coding MGP_NODShiLtJ_T0050865.1 MGP_NODShiLtJ_G0024711.1 mouse_genomes_project 19 9275231 9296669 + MGP_NODShiLtJ_P0050865 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050866.1 MGP_NODShiLtJ_G0024711.1 mouse_genomes_project 19 9275243 9293604 + protein_coding retained_intron MGP_NODShiLtJ_T0050867.1 MGP_NODShiLtJ_G0024711.1 mouse_genomes_project 19 9288493 9297536 + MGP_NODShiLtJ_P0050867 protein_coding protein_coding MGP_NODShiLtJ_T0051581.1 MGP_NODShiLtJ_G0025004.1 mouse_genomes_project 19 46597997 46599629 + Scd4 protein_coding retained_intron MGP_NODShiLtJ_T0051582.1 MGP_NODShiLtJ_G0025004.1 mouse_genomes_project 19 46597997 46611335 + MGP_NODShiLtJ_P0051582 Scd4 protein_coding protein_coding MGP_NODShiLtJ_T0003825.1 MGP_NODShiLtJ_G0003419.1 mouse_genomes_project 19 63420998 63422906 - Gm29261 antisense antisense MGP_NODShiLtJ_T0050938.1 MGP_NODShiLtJ_G0024753.1 mouse_genomes_project 19 10833693 10834737 - MGP_NODShiLtJ_P0050938 Olfr1446 protein_coding protein_coding MGP_NODShiLtJ_T0010196.1 MGP_NODShiLtJ_G0008329.1 mouse_genomes_project 19 6283123 6283199 - Mir5136 miRNA miRNA MGP_NODShiLtJ_T0050817.1 MGP_NODShiLtJ_G0024696.1 mouse_genomes_project 19 8684402 8706189 - MGP_NODShiLtJ_P0050817 Ms4a18 protein_coding protein_coding MGP_NODShiLtJ_T0051331.1 MGP_NODShiLtJ_G0024918.1 mouse_genomes_project 19 39314522 39318244 + MGP_NODShiLtJ_P0051331 Cyp26a1 protein_coding protein_coding MGP_NODShiLtJ_T0051535.1 MGP_NODShiLtJ_G0024989.1 mouse_genomes_project 19 45874645 45885663 - MGP_NODShiLtJ_P0051535 Slc25a28 protein_coding protein_coding MGP_NODShiLtJ_T0007014.1 MGP_NODShiLtJ_G0005754.1 mouse_genomes_project 19 22851421 22897677 - C330002G04Rik lincRNA lincRNA MGP_NODShiLtJ_T0051861.1 MGP_NODShiLtJ_G0025098.1 mouse_genomes_project 19 60170792 60205925 + MGP_NODShiLtJ_P0051861 Habp2 protein_coding protein_coding MGP_NODShiLtJ_T0051862.1 MGP_NODShiLtJ_G0025098.1 mouse_genomes_project 19 60171568 60206656 + MGP_NODShiLtJ_P0051862 Habp2 protein_coding protein_coding MGP_NODShiLtJ_T0051863.1 MGP_NODShiLtJ_G0025098.1 mouse_genomes_project 19 60171582 60196792 + Habp2 protein_coding processed_transcript MGP_NODShiLtJ_T0051864.1 MGP_NODShiLtJ_G0025098.1 mouse_genomes_project 19 60171642 60205470 + MGP_NODShiLtJ_P0051864 Habp2 protein_coding protein_coding MGP_NODShiLtJ_T0051865.1 MGP_NODShiLtJ_G0025098.1 mouse_genomes_project 19 60171642 60202130 + MGP_NODShiLtJ_P0051865 Habp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051866.1 MGP_NODShiLtJ_G0025098.1 mouse_genomes_project 19 60196617 60202252 + MGP_NODShiLtJ_P0051866 Habp2 protein_coding protein_coding MGP_NODShiLtJ_T0051867.1 MGP_NODShiLtJ_G0025098.1 mouse_genomes_project 19 60197749 60205464 + MGP_NODShiLtJ_P0051867 Habp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051148.1 MGP_NODShiLtJ_G0024848.1 mouse_genomes_project 19 29583906 29628268 + MGP_NODShiLtJ_P0051148 Rcl1 protein_coding protein_coding MGP_NODShiLtJ_T0050822.1 MGP_NODShiLtJ_G0024699.1 mouse_genomes_project 19 8847160 8877663 - MGP_NODShiLtJ_P0050822 1700025F22Rik protein_coding protein_coding MGP_NODShiLtJ_T0050823.1 MGP_NODShiLtJ_G0024699.1 mouse_genomes_project 19 8847160 8870599 - MGP_NODShiLtJ_P0050823 1700025F22Rik protein_coding protein_coding MGP_NODShiLtJ_T0050824.1 MGP_NODShiLtJ_G0024699.1 mouse_genomes_project 19 8847160 8877649 - MGP_NODShiLtJ_P0050824 1700025F22Rik protein_coding protein_coding MGP_NODShiLtJ_T0050825.1 MGP_NODShiLtJ_G0024699.1 mouse_genomes_project 19 8847160 8877649 - MGP_NODShiLtJ_P0050825 1700025F22Rik protein_coding protein_coding MGP_NODShiLtJ_T0051361.1 MGP_NODShiLtJ_G0024928.1 mouse_genomes_project 19 40514300 40546792 - MGP_NODShiLtJ_P0051361 Noc3l protein_coding protein_coding MGP_NODShiLtJ_T0051575.1 MGP_NODShiLtJ_G0025000.1 mouse_genomes_project 19 46396061 46405531 - MGP_NODShiLtJ_P0051575 Bloc1s2 protein_coding protein_coding MGP_NODShiLtJ_T0051386.1 MGP_NODShiLtJ_G0024941.1 mouse_genomes_project 19 41862899 41885949 + MGP_NODShiLtJ_P0051386 Cyp2c37 protein_coding protein_coding MGP_NODShiLtJ_T0051387.1 MGP_NODShiLtJ_G0024941.1 mouse_genomes_project 19 41862915 41885614 + MGP_NODShiLtJ_P0051387 Cyp2c37 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051307.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38557069 38758149 - MGP_NODShiLtJ_P0051307 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051308.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38557075 38722184 - MGP_NODShiLtJ_P0051308 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051309.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38557657 38724152 - MGP_NODShiLtJ_P0051309 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051310.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38557657 38758149 - MGP_NODShiLtJ_P0051310 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051311.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38558748 38758160 - MGP_NODShiLtJ_P0051311 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051312.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38559711 38757980 - MGP_NODShiLtJ_P0051312 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051313.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38560415 38748333 - MGP_NODShiLtJ_P0051313 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051314.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38591974 38758195 - MGP_NODShiLtJ_P0051314 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051315.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38722525 38727324 - MGP_NODShiLtJ_P0051315 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051316.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38722681 38724145 - MGP_NODShiLtJ_P0051316 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051317.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38722711 38760566 - MGP_NODShiLtJ_P0051317 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0051318.1 MGP_NODShiLtJ_G0024911.1 mouse_genomes_project 19 38722776 38723305 - MGP_NODShiLtJ_P0051318 Cpeb3 protein_coding protein_coding MGP_NODShiLtJ_T0050472.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3501134 3516892 + MGP_NODShiLtJ_P0050472 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050473.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3501250 3505428 + MGP_NODShiLtJ_P0050473 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050474.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3501540 3505280 + MGP_NODShiLtJ_P0050474 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050475.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3501658 3504369 + MGP_NODShiLtJ_P0050475 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050476.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3501662 3505273 + MGP_NODShiLtJ_P0050476 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050477.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3501668 3506132 + MGP_NODShiLtJ_P0050477 Rasgrp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050478.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3501711 3504241 + Rasgrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0050479.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3501907 3505433 + MGP_NODShiLtJ_P0050479 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050480.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3502321 3504225 + Rasgrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0050481.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3502327 3516887 + MGP_NODShiLtJ_P0050481 Rasgrp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050482.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3502341 3506216 + MGP_NODShiLtJ_P0050482 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050483.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3502356 3516898 + MGP_NODShiLtJ_P0050483 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050484.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3502358 3506619 + MGP_NODShiLtJ_P0050484 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050485.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3502377 3516897 + MGP_NODShiLtJ_P0050485 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050486.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3502417 3505407 + MGP_NODShiLtJ_P0050486 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050487.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3503489 3504241 + Rasgrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0050488.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3503496 3505433 + MGP_NODShiLtJ_P0050488 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050489.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3503512 3505433 + MGP_NODShiLtJ_P0050489 Rasgrp2 protein_coding protein_coding MGP_NODShiLtJ_T0050490.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3503513 3505433 + Rasgrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0050491.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3504712 3506766 + Rasgrp2 protein_coding retained_intron MGP_NODShiLtJ_T0050492.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3506376 3508856 + Rasgrp2 protein_coding retained_intron MGP_NODShiLtJ_T0050493.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3506535 3511463 + Rasgrp2 protein_coding retained_intron MGP_NODShiLtJ_T0050494.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3506621 3515836 + Rasgrp2 protein_coding retained_intron MGP_NODShiLtJ_T0050495.1 MGP_NODShiLtJ_G0024591.1 mouse_genomes_project 19 3510199 3516893 + Rasgrp2 protein_coding processed_transcript MGP_NODShiLtJ_T0051945.1 MGP_NODShiLtJ_G0025119.1 mouse_genomes_project 19 62922229 62989920 - MGP_NODShiLtJ_P0051945 Hspa12a protein_coding protein_coding MGP_NODShiLtJ_T0050218.1 MGP_NODShiLtJ_G0024526.1 mouse_genomes_project 19 2235485 2260630 - MGP_NODShiLtJ_P0050218 Sf3b2 protein_coding protein_coding MGP_NODShiLtJ_T0050769.1 MGP_NODShiLtJ_G0024678.1 mouse_genomes_project 19 8227778 8233691 - MGP_NODShiLtJ_P0050769 Tmem138 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051656.1 MGP_NODShiLtJ_G0025030.1 mouse_genomes_project 19 48270604 48498757 - MGP_NODShiLtJ_P0051656 9130011E15Rik protein_coding protein_coding MGP_NODShiLtJ_T0051060.1 MGP_NODShiLtJ_G0024823.1 mouse_genomes_project 19 24043975 24187566 - MGP_NODShiLtJ_P0051060 Tjp2 protein_coding protein_coding MGP_NODShiLtJ_T0051747.1 MGP_NODShiLtJ_G0025062.1 mouse_genomes_project 19 49806559 49807225 - MGP_NODShiLtJ_P0051747 Gm6970 protein_coding protein_coding MGP_NODShiLtJ_T0051791.1 MGP_NODShiLtJ_G0025076.1 mouse_genomes_project 19 55736241 55737375 + MGP_NODShiLtJ_P0051791 Ins1 protein_coding protein_coding MGP_NODShiLtJ_T0010187.1 MGP_NODShiLtJ_G0008320.1 mouse_genomes_project 19 2699383 2699456 - Mir6987 miRNA miRNA MGP_NODShiLtJ_T0051068.1 MGP_NODShiLtJ_G0024827.1 mouse_genomes_project 19 24688495 24695465 + MGP_NODShiLtJ_P0051068 Tmem252 protein_coding protein_coding MGP_NODShiLtJ_T0050156.1 MGP_NODShiLtJ_G0024500.1 mouse_genomes_project 19 1633227 1674345 + MGP_NODShiLtJ_P0050156 Sptbn2 protein_coding protein_coding MGP_NODShiLtJ_T0051620.1 MGP_NODShiLtJ_G0025020.1 mouse_genomes_project 19 47500486 47506809 + MGP_NODShiLtJ_P0051620 Tlx1 protein_coding protein_coding MGP_NODShiLtJ_T0051621.1 MGP_NODShiLtJ_G0025020.1 mouse_genomes_project 19 47501275 47506265 + MGP_NODShiLtJ_P0051621 Tlx1 protein_coding protein_coding MGP_NODShiLtJ_T0051666.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48560145 48578521 + Pprc1 protein_coding processed_transcript MGP_NODShiLtJ_T0051667.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48572856 48589236 + MGP_NODShiLtJ_P0051667 Pprc1 protein_coding protein_coding MGP_NODShiLtJ_T0051668.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48572898 48589240 + MGP_NODShiLtJ_P0051668 Pprc1 protein_coding protein_coding MGP_NODShiLtJ_T0051669.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48572901 48589234 + MGP_NODShiLtJ_P0051669 Pprc1 protein_coding protein_coding MGP_NODShiLtJ_T0051670.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48573149 48577782 + Pprc1 protein_coding processed_transcript MGP_NODShiLtJ_T0051671.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48573149 48578762 + MGP_NODShiLtJ_P0051671 Pprc1 protein_coding protein_coding MGP_NODShiLtJ_T0051672.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48573181 48579127 + MGP_NODShiLtJ_P0051672 Pprc1 protein_coding protein_coding MGP_NODShiLtJ_T0051673.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48573553 48578952 + MGP_NODShiLtJ_P0051673 Pprc1 protein_coding protein_coding MGP_NODShiLtJ_T0051674.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48573576 48578968 + MGP_NODShiLtJ_P0051674 Pprc1 protein_coding protein_coding MGP_NODShiLtJ_T0051675.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48580404 48589127 + Pprc1 protein_coding retained_intron MGP_NODShiLtJ_T0051676.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48584157 48585412 + Pprc1 protein_coding processed_transcript MGP_NODShiLtJ_T0051677.1 MGP_NODShiLtJ_G0025033.1 mouse_genomes_project 19 48588085 48589127 + Pprc1 protein_coding retained_intron MGP_NODShiLtJ_T0051792.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56488096 56581354 - MGP_NODShiLtJ_P0051792 Xpnpep1 protein_coding protein_coding MGP_NODShiLtJ_T0051793.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56491039 56581442 - MGP_NODShiLtJ_P0051793 Xpnpep1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051794.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56531800 56560808 - Xpnpep1 protein_coding processed_transcript MGP_NODShiLtJ_T0051795.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56531801 56584018 - MGP_NODShiLtJ_P0051795 Xpnpep1 protein_coding protein_coding MGP_NODShiLtJ_T0051796.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56536022 56537292 - Xpnpep1 protein_coding retained_intron MGP_NODShiLtJ_T0051797.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56548586 56556024 - Xpnpep1 protein_coding processed_transcript MGP_NODShiLtJ_T0051798.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56550750 56560643 - Xpnpep1 protein_coding processed_transcript MGP_NODShiLtJ_T0051799.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56552865 56554288 - Xpnpep1 protein_coding retained_intron MGP_NODShiLtJ_T0051800.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56552894 56581361 - MGP_NODShiLtJ_P0051800 Xpnpep1 protein_coding protein_coding MGP_NODShiLtJ_T0051801.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56557937 56572655 - Xpnpep1 protein_coding processed_transcript MGP_NODShiLtJ_T0051802.1 MGP_NODShiLtJ_G0025077.1 mouse_genomes_project 19 56573013 56581365 - Xpnpep1 protein_coding processed_transcript MGP_NODShiLtJ_T0051752.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50156910 50198599 - MGP_NODShiLtJ_P0051752 Obfc1 protein_coding protein_coding MGP_NODShiLtJ_T0051753.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50156915 50165617 - Obfc1 protein_coding processed_transcript MGP_NODShiLtJ_T0051754.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50164076 50198516 - MGP_NODShiLtJ_P0051754 Obfc1 protein_coding protein_coding MGP_NODShiLtJ_T0051755.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50179638 50198444 - Obfc1 protein_coding processed_transcript MGP_NODShiLtJ_T0051756.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50181579 50198376 - Obfc1 protein_coding processed_transcript MGP_NODShiLtJ_T0051757.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50181708 50198574 - Obfc1 protein_coding retained_intron MGP_NODShiLtJ_T0051758.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50182233 50198987 - MGP_NODShiLtJ_P0051758 Obfc1 protein_coding protein_coding MGP_NODShiLtJ_T0051759.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50191506 50197742 - Obfc1 protein_coding processed_transcript MGP_NODShiLtJ_T0051760.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50197394 50198526 - Obfc1 protein_coding retained_intron MGP_NODShiLtJ_T0051761.1 MGP_NODShiLtJ_G0025065.1 mouse_genomes_project 19 50197769 50198504 - Obfc1 protein_coding processed_transcript MGP_NODShiLtJ_T0000996.1 MGP_NODShiLtJ_G0000922.1 mouse_genomes_project 19 39015933 39017681 - TEC TEC MGP_NODShiLtJ_T0051939.1 MGP_NODShiLtJ_G0025114.1 mouse_genomes_project 19 62607644 62655047 + MGP_NODShiLtJ_P0051939 Ccdc172 protein_coding protein_coding MGP_NODShiLtJ_T0050153.1 MGP_NODShiLtJ_G0024499.1 mouse_genomes_project 19 1546426 1619211 - MGP_NODShiLtJ_P0050153 Gm960 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050154.1 MGP_NODShiLtJ_G0024499.1 mouse_genomes_project 19 1546446 1619673 - MGP_NODShiLtJ_P0050154 Gm960 protein_coding protein_coding MGP_NODShiLtJ_T0050155.1 MGP_NODShiLtJ_G0024499.1 mouse_genomes_project 19 1568456 1619320 - MGP_NODShiLtJ_P0050155 Gm960 protein_coding protein_coding MGP_NODShiLtJ_T0050341.1 MGP_NODShiLtJ_G0024568.1 mouse_genomes_project 19 3114682 3116977 + MGP_NODShiLtJ_P0050341 Gm9843 protein_coding protein_coding MGP_NODShiLtJ_T0050923.1 MGP_NODShiLtJ_G0024746.1 mouse_genomes_project 19 10561343 10569562 + MGP_NODShiLtJ_P0050923 Olfr1443 protein_coding protein_coding MGP_NODShiLtJ_T0051734.1 MGP_NODShiLtJ_G0025053.1 mouse_genomes_project 19 49495323 49582086 - MGP_NODShiLtJ_P0051734 Nt5c2 protein_coding protein_coding MGP_NODShiLtJ_T0051735.1 MGP_NODShiLtJ_G0025053.1 mouse_genomes_project 19 49495323 49574827 - MGP_NODShiLtJ_P0051735 Nt5c2 protein_coding protein_coding MGP_NODShiLtJ_T0051736.1 MGP_NODShiLtJ_G0025053.1 mouse_genomes_project 19 49496320 49630294 - MGP_NODShiLtJ_P0051736 Nt5c2 protein_coding protein_coding MGP_NODShiLtJ_T0051737.1 MGP_NODShiLtJ_G0025053.1 mouse_genomes_project 19 49500010 49507725 - MGP_NODShiLtJ_P0051737 Nt5c2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051191.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30588270 30620135 + Uhrf2 protein_coding retained_intron MGP_NODShiLtJ_T0051192.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30588270 30643661 + Uhrf2 protein_coding retained_intron MGP_NODShiLtJ_T0051193.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30588270 30656408 + MGP_NODShiLtJ_P0051193 Uhrf2 protein_coding protein_coding MGP_NODShiLtJ_T0051194.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30588346 30618486 + MGP_NODShiLtJ_P0051194 Uhrf2 protein_coding protein_coding MGP_NODShiLtJ_T0051195.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30635123 30637665 + Uhrf2 protein_coding retained_intron MGP_NODShiLtJ_T0051196.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30640645 30642387 + Uhrf2 protein_coding retained_intron MGP_NODShiLtJ_T0051197.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30647836 30650070 + Uhrf2 protein_coding retained_intron MGP_NODShiLtJ_T0051198.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30651755 30656408 + Uhrf2 protein_coding retained_intron MGP_NODShiLtJ_T0051199.1 MGP_NODShiLtJ_G0024862.1 mouse_genomes_project 19 30654646 30655625 + Uhrf2 protein_coding retained_intron MGP_NODShiLtJ_T0051609.1 MGP_NODShiLtJ_G0025016.1 mouse_genomes_project 19 47347230 47363173 + MGP_NODShiLtJ_P0051609 Lzts2 protein_coding protein_coding MGP_NODShiLtJ_T0051610.1 MGP_NODShiLtJ_G0025016.1 mouse_genomes_project 19 47347264 47363173 + MGP_NODShiLtJ_P0051610 Lzts2 protein_coding protein_coding MGP_NODShiLtJ_T0051611.1 MGP_NODShiLtJ_G0025016.1 mouse_genomes_project 19 47352649 47363173 + MGP_NODShiLtJ_P0051611 Lzts2 protein_coding protein_coding MGP_NODShiLtJ_T0100327.1 MGP_NODShiLtJ_G0038721.1 mouse_genomes_project 19 25230529 25230661 - Gm24252 snoRNA snoRNA MGP_NODShiLtJ_T0010221.1 MGP_NODShiLtJ_G0008354.1 mouse_genomes_project 19 49915715 49915786 - Mir6995 miRNA miRNA MGP_NODShiLtJ_T0051803.1 MGP_NODShiLtJ_G0025078.1 mouse_genomes_project 19 56699357 56814058 + MGP_NODShiLtJ_P0051803 Add3 protein_coding protein_coding MGP_NODShiLtJ_T0051804.1 MGP_NODShiLtJ_G0025078.1 mouse_genomes_project 19 56701668 56814058 + MGP_NODShiLtJ_P0051804 Add3 protein_coding protein_coding MGP_NODShiLtJ_T0051805.1 MGP_NODShiLtJ_G0025078.1 mouse_genomes_project 19 56702907 56814058 + MGP_NODShiLtJ_P0051805 Add3 protein_coding protein_coding MGP_NODShiLtJ_T0099083.1 MGP_NODShiLtJ_G0037477.1 mouse_genomes_project 19 54498995 54499102 - Gm25644 snRNA snRNA MGP_NODShiLtJ_T0050592.1 MGP_NODShiLtJ_G0024621.1 mouse_genomes_project 19 4625175 4688571 - MGP_NODShiLtJ_P0050592 Rtn3 protein_coding protein_coding MGP_NODShiLtJ_T0050593.1 MGP_NODShiLtJ_G0024621.1 mouse_genomes_project 19 4625175 4688571 - MGP_NODShiLtJ_P0050593 Rtn3 protein_coding protein_coding MGP_NODShiLtJ_T0050594.1 MGP_NODShiLtJ_G0024621.1 mouse_genomes_project 19 4625175 4688563 - MGP_NODShiLtJ_P0050594 Rtn3 protein_coding protein_coding MGP_NODShiLtJ_T0050595.1 MGP_NODShiLtJ_G0024621.1 mouse_genomes_project 19 4626302 4688501 - MGP_NODShiLtJ_P0050595 Rtn3 protein_coding protein_coding MGP_NODShiLtJ_T0010227.1 MGP_NODShiLtJ_G0008360.1 mouse_genomes_project 19 58993597 58993654 + Mir6715 miRNA miRNA MGP_NODShiLtJ_T0011373.1 MGP_NODShiLtJ_G0009506.1 mouse_genomes_project 19 40624364 40624484 + Gm25838 misc_RNA misc_RNA MGP_NODShiLtJ_T0003806.1 MGP_NODShiLtJ_G0003404.1 mouse_genomes_project 19 22212704 22222490 - Gm27151 antisense antisense MGP_NODShiLtJ_T0003807.1 MGP_NODShiLtJ_G0003404.1 mouse_genomes_project 19 22212734 22223213 - Gm27151 antisense antisense MGP_NODShiLtJ_T0050828.1 MGP_NODShiLtJ_G0024701.1 mouse_genomes_project 19 8930396 8938964 - MGP_NODShiLtJ_P0050828 Ms4a12 protein_coding protein_coding MGP_NODShiLtJ_T0099062.1 MGP_NODShiLtJ_G0037456.1 mouse_genomes_project 19 1843530 1843640 + Gm25334 snRNA snRNA MGP_NODShiLtJ_T0050973.1 MGP_NODShiLtJ_G0024787.1 mouse_genomes_project 19 13739391 13740093 - MGP_NODShiLtJ_P0050973 protein_coding protein_coding MGP_NODShiLtJ_T0010216.1 MGP_NODShiLtJ_G0008349.1 mouse_genomes_project 19 44383653 44383742 - Mir3085 miRNA miRNA MGP_NODShiLtJ_T0051329.1 MGP_NODShiLtJ_G0024916.1 mouse_genomes_project 19 39155993 39299965 + MGP_NODShiLtJ_P0051329 Exoc6 protein_coding protein_coding MGP_NODShiLtJ_T0051190.1 MGP_NODShiLtJ_G0024861.1 mouse_genomes_project 19 30561018 30563249 + MGP_NODShiLtJ_P0051190 Trpd52l3 protein_coding protein_coding MGP_NODShiLtJ_T0051236.1 MGP_NODShiLtJ_G0024876.1 mouse_genomes_project 19 34440278 34517458 - MGP_NODShiLtJ_P0051236 Lipo5 protein_coding protein_coding MGP_NODShiLtJ_T0051285.1 MGP_NODShiLtJ_G0024905.1 mouse_genomes_project 19 37801219 37888705 + MGP_NODShiLtJ_P0051285 Pcgf5 protein_coding protein_coding MGP_NODShiLtJ_T0051286.1 MGP_NODShiLtJ_G0024905.1 mouse_genomes_project 19 37836814 37888705 + MGP_NODShiLtJ_P0051286 Pcgf5 protein_coding protein_coding MGP_NODShiLtJ_T0050107.1 MGP_NODShiLtJ_G0024489.1 mouse_genomes_project 19 1150698 1158203 - MGP_NODShiLtJ_P0050107 Ssh3 protein_coding protein_coding MGP_NODShiLtJ_T0050108.1 MGP_NODShiLtJ_G0024489.1 mouse_genomes_project 19 1150703 1158203 - MGP_NODShiLtJ_P0050108 Ssh3 protein_coding protein_coding MGP_NODShiLtJ_T0100324.1 MGP_NODShiLtJ_G0038718.1 mouse_genomes_project 19 19422188 19422320 - Gm22684 snoRNA snoRNA MGP_NODShiLtJ_T0049993.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 692692 737781 + MGP_NODShiLtJ_P0049993 Chka protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049994.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 692716 737785 + MGP_NODShiLtJ_P0049994 Chka protein_coding protein_coding MGP_NODShiLtJ_T0049995.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 692729 715336 + Chka protein_coding retained_intron MGP_NODShiLtJ_T0049996.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 692729 737783 + Chka protein_coding retained_intron MGP_NODShiLtJ_T0049997.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 692751 710103 + Chka protein_coding retained_intron MGP_NODShiLtJ_T0049998.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 692751 722037 + Chka protein_coding retained_intron MGP_NODShiLtJ_T0049999.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 692995 737780 + MGP_NODShiLtJ_P0049999 Chka protein_coding protein_coding MGP_NODShiLtJ_T0050000.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 693020 729279 + MGP_NODShiLtJ_P0050000 Chka protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050001.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 693282 730865 + MGP_NODShiLtJ_P0050001 Chka protein_coding protein_coding MGP_NODShiLtJ_T0050002.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 718086 733350 + MGP_NODShiLtJ_P0050002 Chka protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050003.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 718787 728000 + Chka protein_coding processed_transcript MGP_NODShiLtJ_T0050004.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 718801 727953 + Chka protein_coding retained_intron MGP_NODShiLtJ_T0050005.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 718827 729831 + Chka protein_coding processed_transcript MGP_NODShiLtJ_T0050006.1 MGP_NODShiLtJ_G0024460.1 mouse_genomes_project 19 735146 737073 + Chka protein_coding retained_intron MGP_NODShiLtJ_T0050765.1 MGP_NODShiLtJ_G0024677.1 mouse_genomes_project 19 8173269 8209397 - MGP_NODShiLtJ_P0050765 Tmem216 protein_coding protein_coding MGP_NODShiLtJ_T0050766.1 MGP_NODShiLtJ_G0024677.1 mouse_genomes_project 19 8204114 8209421 - MGP_NODShiLtJ_P0050766 Tmem216 protein_coding protein_coding MGP_NODShiLtJ_T0050767.1 MGP_NODShiLtJ_G0024677.1 mouse_genomes_project 19 8204151 8209412 - MGP_NODShiLtJ_P0050767 Tmem216 protein_coding protein_coding MGP_NODShiLtJ_T0050768.1 MGP_NODShiLtJ_G0024677.1 mouse_genomes_project 19 8208407 8209412 - Tmem216 protein_coding retained_intron MGP_NODShiLtJ_T0007027.1 MGP_NODShiLtJ_G0005762.1 mouse_genomes_project 19 34370927 34393023 - lincRNA lincRNA MGP_NODShiLtJ_T0051228.1 MGP_NODShiLtJ_G0024871.1 mouse_genomes_project 19 33330546 33359559 + MGP_NODShiLtJ_P0051228 Minpp1 protein_coding protein_coding MGP_NODShiLtJ_T0051363.1 MGP_NODShiLtJ_G0024930.1 mouse_genomes_project 19 40675866 40732117 + MGP_NODShiLtJ_P0051363 protein_coding protein_coding MGP_NODShiLtJ_T0051364.1 MGP_NODShiLtJ_G0024930.1 mouse_genomes_project 19 40675981 40686260 + protein_coding retained_intron MGP_NODShiLtJ_T0051365.1 MGP_NODShiLtJ_G0024930.1 mouse_genomes_project 19 40676125 40690697 + MGP_NODShiLtJ_P0051365 protein_coding protein_coding MGP_NODShiLtJ_T0051366.1 MGP_NODShiLtJ_G0024930.1 mouse_genomes_project 19 40676341 40700075 + protein_coding processed_transcript MGP_NODShiLtJ_T0051367.1 MGP_NODShiLtJ_G0024930.1 mouse_genomes_project 19 40679459 40686361 + protein_coding retained_intron MGP_NODShiLtJ_T0051368.1 MGP_NODShiLtJ_G0024930.1 mouse_genomes_project 19 40690471 40696879 + protein_coding processed_transcript MGP_NODShiLtJ_T0097792.1 MGP_NODShiLtJ_G0036204.1 mouse_genomes_project 19 64464394 64465741 + pseudogene pseudogene MGP_NODShiLtJ_T0051185.1 MGP_NODShiLtJ_G0024860.1 mouse_genomes_project 19 30480134 30519091 + MGP_NODShiLtJ_P0051185 Il33 protein_coding protein_coding MGP_NODShiLtJ_T0051186.1 MGP_NODShiLtJ_G0024860.1 mouse_genomes_project 19 30480135 30508673 + MGP_NODShiLtJ_P0051186 Il33 protein_coding protein_coding MGP_NODShiLtJ_T0051187.1 MGP_NODShiLtJ_G0024860.1 mouse_genomes_project 19 30480152 30517348 + MGP_NODShiLtJ_P0051187 Il33 protein_coding protein_coding MGP_NODShiLtJ_T0051188.1 MGP_NODShiLtJ_G0024860.1 mouse_genomes_project 19 30502345 30519077 + MGP_NODShiLtJ_P0051188 Il33 protein_coding protein_coding MGP_NODShiLtJ_T0051189.1 MGP_NODShiLtJ_G0024860.1 mouse_genomes_project 19 30508411 30509409 + MGP_NODShiLtJ_P0051189 Il33 protein_coding protein_coding MGP_NODShiLtJ_T0050540.1 MGP_NODShiLtJ_G0024603.1 mouse_genomes_project 19 4096326 4115049 - MGP_NODShiLtJ_P0050540 Plcb3 protein_coding protein_coding MGP_NODShiLtJ_T0011362.1 MGP_NODShiLtJ_G0009495.1 mouse_genomes_project 19 2878930 2879040 - Gm27505 misc_RNA misc_RNA MGP_NODShiLtJ_T0050967.1 MGP_NODShiLtJ_G0024782.1 mouse_genomes_project 19 12147056 12148004 - MGP_NODShiLtJ_P0050967 Olfr1501 protein_coding protein_coding MGP_NODShiLtJ_T0050744.1 MGP_NODShiLtJ_G0024669.1 mouse_genomes_project 19 7829892 7833703 + Tmem258 protein_coding processed_transcript MGP_NODShiLtJ_T0050745.1 MGP_NODShiLtJ_G0024669.1 mouse_genomes_project 19 7829892 7833703 + MGP_NODShiLtJ_P0050745 Tmem258 protein_coding protein_coding MGP_NODShiLtJ_T0050746.1 MGP_NODShiLtJ_G0024669.1 mouse_genomes_project 19 7830096 7833697 + Tmem258 protein_coding retained_intron MGP_NODShiLtJ_T0050747.1 MGP_NODShiLtJ_G0024669.1 mouse_genomes_project 19 7831911 7833703 + MGP_NODShiLtJ_P0050747 Tmem258 protein_coding protein_coding MGP_NODShiLtJ_T0050616.1 MGP_NODShiLtJ_G0024630.1 mouse_genomes_project 19 5977675 5987984 + MGP_NODShiLtJ_P0050616 Slc22a6 protein_coding protein_coding MGP_NODShiLtJ_T0050775.1 MGP_NODShiLtJ_G0024683.1 mouse_genomes_project 19 8332047 8348728 - MGP_NODShiLtJ_P0050775 Pga5 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050776.1 MGP_NODShiLtJ_G0024683.1 mouse_genomes_project 19 8332051 8342297 - MGP_NODShiLtJ_P0050776 Pga5 protein_coding protein_coding MGP_NODShiLtJ_T0051446.1 MGP_NODShiLtJ_G0024960.1 mouse_genomes_project 19 43630624 43634755 + MGP_NODShiLtJ_P0051446 AI606181 protein_coding protein_coding MGP_NODShiLtJ_T0050318.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2931605 2948326 - MGP_NODShiLtJ_P0050318 Dpf2 protein_coding protein_coding MGP_NODShiLtJ_T0050319.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2932476 2948247 - MGP_NODShiLtJ_P0050319 Dpf2 protein_coding protein_coding MGP_NODShiLtJ_T0050320.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2932476 2942610 - MGP_NODShiLtJ_P0050320 Dpf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050321.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2934294 2938883 - Dpf2 protein_coding retained_intron MGP_NODShiLtJ_T0050322.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2934863 2937992 - Dpf2 protein_coding retained_intron MGP_NODShiLtJ_T0050323.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2939697 2948232 - Dpf2 protein_coding retained_intron MGP_NODShiLtJ_T0050324.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2940676 2948224 - Dpf2 protein_coding retained_intron MGP_NODShiLtJ_T0050325.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2941087 2948465 - Dpf2 protein_coding processed_transcript MGP_NODShiLtJ_T0050326.1 MGP_NODShiLtJ_G0024561.1 mouse_genomes_project 19 2947280 2948262 - Dpf2 protein_coding processed_transcript MGP_NODShiLtJ_T0051025.1 MGP_NODShiLtJ_G0024807.1 mouse_genomes_project 19 20344828 20557288 - MGP_NODShiLtJ_P0051025 Tmc1 protein_coding protein_coding MGP_NODShiLtJ_T0051438.1 MGP_NODShiLtJ_G0024954.1 mouse_genomes_project 19 43072796 43092498 - MGP_NODShiLtJ_P0051438 Opalin protein_coding protein_coding MGP_NODShiLtJ_T0051627.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 47975964 48074024 - MGP_NODShiLtJ_P0051627 Fbxw4 protein_coding protein_coding MGP_NODShiLtJ_T0051629.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 47976329 47991086 - MGP_NODShiLtJ_P0051629 Fbxw4 protein_coding protein_coding MGP_NODShiLtJ_T0051630.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 47976510 47989461 - MGP_NODShiLtJ_P0051630 Fbxw4 protein_coding protein_coding MGP_NODShiLtJ_T0051631.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 47976512 47977606 - Fbxw4 protein_coding retained_intron MGP_NODShiLtJ_T0051632.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 47976556 47989461 - MGP_NODShiLtJ_P0051632 Fbxw4 protein_coding protein_coding MGP_NODShiLtJ_T0051633.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 47976627 47990280 - MGP_NODShiLtJ_P0051633 Fbxw4 protein_coding protein_coding MGP_NODShiLtJ_T0051634.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 47977477 48031772 - Fbxw4 protein_coding retained_intron MGP_NODShiLtJ_T0051635.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 47989079 48031772 - Fbxw4 protein_coding retained_intron MGP_NODShiLtJ_T0051636.1 MGP_NODShiLtJ_G0025025.1 mouse_genomes_project 19 48031507 48041466 - MGP_NODShiLtJ_P0051636 Fbxw4 protein_coding protein_coding MGP_NODShiLtJ_T0101435.1 MGP_NODShiLtJ_G0039624.1 mouse_genomes_project 19 48880281 48882406 - unitary_pseudogene processed_transcript MGP_NODShiLtJ_T0101436.1 MGP_NODShiLtJ_G0039624.1 mouse_genomes_project 19 48880979 48882406 - unitary_pseudogene unitary_pseudogene MGP_NODShiLtJ_T0051812.1 MGP_NODShiLtJ_G0025084.1 mouse_genomes_project 19 57156683 57170020 + MGP_NODShiLtJ_P0051812 Dusp5 protein_coding protein_coding MGP_NODShiLtJ_T0011367.1 MGP_NODShiLtJ_G0009500.1 mouse_genomes_project 19 17770692 17770908 - Gm24190 misc_RNA misc_RNA MGP_NODShiLtJ_T0050818.1 MGP_NODShiLtJ_G0024697.1 mouse_genomes_project 19 8767870 8782505 - MGP_NODShiLtJ_P0050818 Ms4a8a protein_coding protein_coding MGP_NODShiLtJ_T0050819.1 MGP_NODShiLtJ_G0024697.1 mouse_genomes_project 19 8776969 8782505 - Ms4a8a protein_coding retained_intron MGP_NODShiLtJ_T0051080.1 MGP_NODShiLtJ_G0024833.1 mouse_genomes_project 19 25591874 25697605 + MGP_NODShiLtJ_P0051080 Dmrt1 protein_coding protein_coding MGP_NODShiLtJ_T0051081.1 MGP_NODShiLtJ_G0024833.1 mouse_genomes_project 19 25591962 25696767 + MGP_NODShiLtJ_P0051081 Dmrt1 protein_coding protein_coding MGP_NODShiLtJ_T0051082.1 MGP_NODShiLtJ_G0024833.1 mouse_genomes_project 19 25591963 25652272 + Dmrt1 protein_coding processed_transcript MGP_NODShiLtJ_T0051262.1 MGP_NODShiLtJ_G0024892.1 mouse_genomes_project 19 35575469 35615335 - MGP_NODShiLtJ_P0051262 Lipa protein_coding protein_coding MGP_NODShiLtJ_T0051263.1 MGP_NODShiLtJ_G0024892.1 mouse_genomes_project 19 35575469 35615335 - MGP_NODShiLtJ_P0051263 Lipa protein_coding protein_coding MGP_NODShiLtJ_T0050954.1 MGP_NODShiLtJ_G0024769.1 mouse_genomes_project 19 11484566 11485493 + MGP_NODShiLtJ_P0050954 Olfr1467 protein_coding protein_coding MGP_NODShiLtJ_T0051414.1 MGP_NODShiLtJ_G0024948.1 mouse_genomes_project 19 42580677 42597618 - MGP_NODShiLtJ_P0051414 Tctn3 protein_coding protein_coding MGP_NODShiLtJ_T0051415.1 MGP_NODShiLtJ_G0024948.1 mouse_genomes_project 19 42590474 42597588 - MGP_NODShiLtJ_P0051415 Tctn3 protein_coding protein_coding MGP_NODShiLtJ_T0051416.1 MGP_NODShiLtJ_G0024948.1 mouse_genomes_project 19 42592501 42597585 - MGP_NODShiLtJ_P0051416 Tctn3 protein_coding protein_coding MGP_NODShiLtJ_T0051417.1 MGP_NODShiLtJ_G0024948.1 mouse_genomes_project 19 42596509 42597573 - Tctn3 protein_coding retained_intron MGP_NODShiLtJ_T0051067.1 MGP_NODShiLtJ_G0024826.1 mouse_genomes_project 19 24458985 24459840 - MGP_NODShiLtJ_P0051067 Fam122a protein_coding protein_coding MGP_NODShiLtJ_T0050950.1 MGP_NODShiLtJ_G0024765.1 mouse_genomes_project 19 11188543 11189467 + MGP_NODShiLtJ_P0050950 Olfr1462 protein_coding protein_coding MGP_NODShiLtJ_T0051376.1 MGP_NODShiLtJ_G0024935.1 mouse_genomes_project 19 41174167 41238086 - MGP_NODShiLtJ_P0051376 Cyp2c38 protein_coding protein_coding MGP_NODShiLtJ_T0050974.1 MGP_NODShiLtJ_G0024788.1 mouse_genomes_project 19 14540108 14563000 - MGP_NODShiLtJ_P0050974 Psat1 protein_coding protein_coding MGP_NODShiLtJ_T0050975.1 MGP_NODShiLtJ_G0024788.1 mouse_genomes_project 19 14540557 14562555 - MGP_NODShiLtJ_P0050975 Psat1 protein_coding protein_coding MGP_NODShiLtJ_T0050976.1 MGP_NODShiLtJ_G0024788.1 mouse_genomes_project 19 14540560 14546882 - Psat1 protein_coding retained_intron MGP_NODShiLtJ_T0050977.1 MGP_NODShiLtJ_G0024788.1 mouse_genomes_project 19 14552173 14589214 - MGP_NODShiLtJ_P0050977 Psat1 protein_coding protein_coding MGP_NODShiLtJ_T0050978.1 MGP_NODShiLtJ_G0024788.1 mouse_genomes_project 19 14554011 14555510 - Psat1 protein_coding processed_transcript MGP_NODShiLtJ_T0050979.1 MGP_NODShiLtJ_G0024788.1 mouse_genomes_project 19 14555575 14558588 - Psat1 protein_coding retained_intron MGP_NODShiLtJ_T0050980.1 MGP_NODShiLtJ_G0024788.1 mouse_genomes_project 19 14557675 14562871 - Psat1 protein_coding retained_intron MGP_NODShiLtJ_T0007015.1 MGP_NODShiLtJ_G0005755.1 mouse_genomes_project 19 22969790 22970606 + 2410080I02Rik lincRNA lincRNA MGP_NODShiLtJ_T0050219.1 MGP_NODShiLtJ_G0024527.1 mouse_genomes_project 19 2263503 2275100 + MGP_NODShiLtJ_P0050219 Gal3st3 protein_coding protein_coding MGP_NODShiLtJ_T0017565.1 MGP_NODShiLtJ_G0015254.1 mouse_genomes_project 19 26820568 26823166 - Gm20616 processed_transcript processed_transcript MGP_NODShiLtJ_T0017566.1 MGP_NODShiLtJ_G0015254.1 mouse_genomes_project 19 26820779 26823157 - Gm20616 processed_transcript processed_transcript MGP_NODShiLtJ_T0051557.1 MGP_NODShiLtJ_G0024996.1 mouse_genomes_project 19 46249650 46279932 - MGP_NODShiLtJ_P0051557 Cyp2c44 protein_coding protein_coding MGP_NODShiLtJ_T0051553.1 MGP_NODShiLtJ_G0024994.1 mouse_genomes_project 19 46081155 46158931 - MGP_NODShiLtJ_P0051553 Dnmbp protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051554.1 MGP_NODShiLtJ_G0024994.1 mouse_genomes_project 19 46082309 46150234 - MGP_NODShiLtJ_P0051554 Dnmbp protein_coding protein_coding MGP_NODShiLtJ_T0051007.1 MGP_NODShiLtJ_G0024800.1 mouse_genomes_project 19 17636084 17680922 + MGP_NODShiLtJ_P0051007 Carnmt1 protein_coding protein_coding MGP_NODShiLtJ_T0011372.1 MGP_NODShiLtJ_G0009505.1 mouse_genomes_project 19 40165936 40166019 - Gm24930 misc_RNA misc_RNA MGP_NODShiLtJ_T0051905.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60968790 61164941 - MGP_NODShiLtJ_P0051905 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051906.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60968947 61058344 - MGP_NODShiLtJ_P0051906 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051907.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60969323 61058344 - MGP_NODShiLtJ_P0051907 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051908.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60969330 61144533 - MGP_NODShiLtJ_P0051908 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051909.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60972335 61190278 - MGP_NODShiLtJ_P0051909 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051910.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60972478 61058342 - MGP_NODShiLtJ_P0051910 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051911.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60972539 61058248 - MGP_NODShiLtJ_P0051911 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051912.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60972756 61144358 - MGP_NODShiLtJ_P0051912 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051913.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60973038 61190810 - MGP_NODShiLtJ_P0051913 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051914.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60973076 61164874 - MGP_NODShiLtJ_P0051914 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051915.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60973212 61144293 - MGP_NODShiLtJ_P0051915 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051916.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60973254 61144398 - MGP_NODShiLtJ_P0051916 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051917.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60973323 61266497 - Ablim1 protein_coding retained_intron MGP_NODShiLtJ_T0051918.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60975513 60983320 - Ablim1 protein_coding processed_transcript MGP_NODShiLtJ_T0051919.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60977135 60981023 - Ablim1 protein_coding retained_intron MGP_NODShiLtJ_T0051920.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 60996932 61075720 - Ablim1 protein_coding retained_intron MGP_NODShiLtJ_T0051921.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 61012802 61075689 - Ablim1 protein_coding processed_transcript MGP_NODShiLtJ_T0051922.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 61055384 61058359 - Ablim1 protein_coding processed_transcript MGP_NODShiLtJ_T0051923.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 61071275 61075720 - Ablim1 protein_coding processed_transcript MGP_NODShiLtJ_T0051924.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 61071617 61266489 - MGP_NODShiLtJ_P0051924 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051925.1 MGP_NODShiLtJ_G0025109.1 mouse_genomes_project 19 61071857 61127563 - MGP_NODShiLtJ_P0051925 Ablim1 protein_coding protein_coding MGP_NODShiLtJ_T0051824.1 MGP_NODShiLtJ_G0025089.1 mouse_genomes_project 19 57615744 57712053 + MGP_NODShiLtJ_P0051824 Shoc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050939.1 MGP_NODShiLtJ_G0024754.1 mouse_genomes_project 19 10847734 10848837 - MGP_NODShiLtJ_P0050939 Olfr1447 protein_coding protein_coding MGP_NODShiLtJ_T0099081.1 MGP_NODShiLtJ_G0037475.1 mouse_genomes_project 19 49676781 49676888 + Gm23140 snRNA snRNA MGP_NODShiLtJ_T0017511.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005750 1012071 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017512.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005775 1011513 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017513.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005775 1011513 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017514.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005775 1011512 + Tmem134 processed_transcript retained_intron MGP_NODShiLtJ_T0017515.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005775 1011230 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017516.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005775 1011513 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017517.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005776 1012091 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017518.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005776 1012093 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017519.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005776 1012071 + Tmem134 processed_transcript retained_intron MGP_NODShiLtJ_T0017520.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005791 1011513 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017521.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005795 1011521 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017522.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005803 1011516 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017523.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005805 1011513 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017524.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005805 1007555 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017525.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1005845 1011518 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0017526.1 MGP_NODShiLtJ_G0015243.1 mouse_genomes_project 19 1007387 1011043 + Tmem134 processed_transcript processed_transcript MGP_NODShiLtJ_T0051459.1 MGP_NODShiLtJ_G0024966.1 mouse_genomes_project 19 43989261 44000678 - MGP_NODShiLtJ_P0051459 Exosc1 protein_coding protein_coding MGP_NODShiLtJ_T0051460.1 MGP_NODShiLtJ_G0024966.1 mouse_genomes_project 19 43989261 44000678 - MGP_NODShiLtJ_P0051460 Exosc1 protein_coding protein_coding MGP_NODShiLtJ_T0050087.1 MGP_NODShiLtJ_G0024481.1 mouse_genomes_project 19 1036244 1038390 + MGP_NODShiLtJ_P0050087 Ptprcap protein_coding protein_coding MGP_NODShiLtJ_T0050357.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3126535 3140857 - MGP_NODShiLtJ_P0050357 Vps51 protein_coding protein_coding MGP_NODShiLtJ_T0050358.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3126683 3128013 - Vps51 protein_coding retained_intron MGP_NODShiLtJ_T0050359.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3126687 3136631 - MGP_NODShiLtJ_P0050359 Vps51 protein_coding protein_coding MGP_NODShiLtJ_T0050360.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3126744 3127844 - Vps51 protein_coding retained_intron MGP_NODShiLtJ_T0050361.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3126910 3127765 - MGP_NODShiLtJ_P0050361 Vps51 protein_coding protein_coding MGP_NODShiLtJ_T0050362.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3127442 3128307 - Vps51 protein_coding retained_intron MGP_NODShiLtJ_T0050363.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3127561 3128392 - Vps51 protein_coding retained_intron MGP_NODShiLtJ_T0050364.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3128774 3136637 - Vps51 protein_coding retained_intron MGP_NODShiLtJ_T0050365.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3130110 3136302 - Vps51 protein_coding retained_intron MGP_NODShiLtJ_T0050366.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3130175 3136632 - MGP_NODShiLtJ_P0050366 Vps51 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050367.1 MGP_NODShiLtJ_G0024571.1 mouse_genomes_project 19 3135336 3136634 - MGP_NODShiLtJ_P0050367 Vps51 protein_coding protein_coding MGP_NODShiLtJ_T0051954.1 MGP_NODShiLtJ_G0025124.1 mouse_genomes_project 19 63422364 63459410 + MGP_NODShiLtJ_P0051954 Slc18a2 protein_coding protein_coding MGP_NODShiLtJ_T0051950.1 MGP_NODShiLtJ_G0025121.1 mouse_genomes_project 19 63118145 63220761 - MGP_NODShiLtJ_P0051950 Shtn1 protein_coding protein_coding MGP_NODShiLtJ_T0099061.1 MGP_NODShiLtJ_G0037455.1 mouse_genomes_project 19 258006 258111 + Gm23940 snRNA snRNA MGP_NODShiLtJ_T0013258.1 MGP_NODShiLtJ_G0011366.1 mouse_genomes_project 19 9520306 9521099 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010220.1 MGP_NODShiLtJ_G0008353.1 mouse_genomes_project 19 48873516 48873625 + Mir146b miRNA miRNA MGP_NODShiLtJ_T0050949.1 MGP_NODShiLtJ_G0024764.1 mouse_genomes_project 19 11155667 11156606 + MGP_NODShiLtJ_P0050949 Olfr1461 protein_coding protein_coding MGP_NODShiLtJ_T0011360.1 MGP_NODShiLtJ_G0009493.1 mouse_genomes_project 19 2832581 2832667 - Gm27694 misc_RNA misc_RNA MGP_NODShiLtJ_T0051045.1 MGP_NODShiLtJ_G0024814.1 mouse_genomes_project 19 21866135 22796289 + MGP_NODShiLtJ_P0051045 Trpm3 protein_coding protein_coding MGP_NODShiLtJ_T0051046.1 MGP_NODShiLtJ_G0024814.1 mouse_genomes_project 19 21866135 22796289 + MGP_NODShiLtJ_P0051046 Trpm3 protein_coding protein_coding MGP_NODShiLtJ_T0051047.1 MGP_NODShiLtJ_G0024814.1 mouse_genomes_project 19 21866135 22796289 + MGP_NODShiLtJ_P0051047 Trpm3 protein_coding protein_coding MGP_NODShiLtJ_T0051048.1 MGP_NODShiLtJ_G0024814.1 mouse_genomes_project 19 22222630 22796291 + MGP_NODShiLtJ_P0051048 Trpm3 protein_coding protein_coding MGP_NODShiLtJ_T0051049.1 MGP_NODShiLtJ_G0024814.1 mouse_genomes_project 19 22482473 22563458 + MGP_NODShiLtJ_P0051049 Trpm3 protein_coding protein_coding MGP_NODShiLtJ_T0051050.1 MGP_NODShiLtJ_G0024814.1 mouse_genomes_project 19 22482473 22730153 + MGP_NODShiLtJ_P0051050 Trpm3 protein_coding protein_coding MGP_NODShiLtJ_T0007057.1 MGP_NODShiLtJ_G0005784.1 mouse_genomes_project 19 62715428 62742257 + 1810007D17Rik lincRNA lincRNA MGP_NODShiLtJ_T0050317.1 MGP_NODShiLtJ_G0024560.1 mouse_genomes_project 19 2926199 2929197 - MGP_NODShiLtJ_P0050317 Tigd3 protein_coding protein_coding MGP_NODShiLtJ_T0050868.1 MGP_NODShiLtJ_G0024712.1 mouse_genomes_project 19 9321848 9356567 + MGP_NODShiLtJ_P0050868 Ms4a4d protein_coding protein_coding MGP_NODShiLtJ_T0007028.1 MGP_NODShiLtJ_G0005763.1 mouse_genomes_project 19 35559183 35560994 + Gm26902 lincRNA lincRNA MGP_NODShiLtJ_T0007029.1 MGP_NODShiLtJ_G0005763.1 mouse_genomes_project 19 35559208 35567441 + Gm26902 lincRNA lincRNA MGP_NODShiLtJ_T0007017.1 MGP_NODShiLtJ_G0005757.1 mouse_genomes_project 19 25766526 25767632 - 2610016A17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007018.1 MGP_NODShiLtJ_G0005757.1 mouse_genomes_project 19 25766564 25767615 - 2610016A17Rik lincRNA lincRNA MGP_NODShiLtJ_T0007019.1 MGP_NODShiLtJ_G0005757.1 mouse_genomes_project 19 25766957 25767646 - 2610016A17Rik lincRNA lincRNA MGP_NODShiLtJ_T0099077.1 MGP_NODShiLtJ_G0037471.1 mouse_genomes_project 19 39053738 39053844 + Gm23026 snRNA snRNA MGP_NODShiLtJ_T0010211.1 MGP_NODShiLtJ_G0008344.1 mouse_genomes_project 19 36501034 36501104 - Gm23075 miRNA miRNA MGP_NODShiLtJ_T0050935.1 MGP_NODShiLtJ_G0024750.1 mouse_genomes_project 19 10699014 10735110 + MGP_NODShiLtJ_P0050935 Lpxn protein_coding protein_coding MGP_NODShiLtJ_T0050277.1 MGP_NODShiLtJ_G0024548.1 mouse_genomes_project 19 2656694 2667354 + MGP_NODShiLtJ_P0050277 Rela protein_coding protein_coding MGP_NODShiLtJ_T0003804.1 MGP_NODShiLtJ_G0003403.1 mouse_genomes_project 19 10595142 10614608 - Gm15962 antisense antisense MGP_NODShiLtJ_T0003805.1 MGP_NODShiLtJ_G0003403.1 mouse_genomes_project 19 10609186 10614652 - Gm15962 antisense antisense MGP_NODShiLtJ_T0050547.1 MGP_NODShiLtJ_G0024607.1 mouse_genomes_project 19 4136107 4140504 - MGP_NODShiLtJ_P0050547 Dnajc4 protein_coding protein_coding MGP_NODShiLtJ_T0051503.1 MGP_NODShiLtJ_G0024978.1 mouse_genomes_project 19 44292741 44297021 - MGP_NODShiLtJ_P0051503 Sfrp5 protein_coding protein_coding MGP_NODShiLtJ_T0051838.1 MGP_NODShiLtJ_G0025096.1 mouse_genomes_project 19 59120060 59468435 + MGP_NODShiLtJ_P0051838 Vti1a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051839.1 MGP_NODShiLtJ_G0025096.1 mouse_genomes_project 19 59120111 59467680 + MGP_NODShiLtJ_P0051839 Vti1a protein_coding protein_coding MGP_NODShiLtJ_T0051626.1 MGP_NODShiLtJ_G0025024.1 mouse_genomes_project 19 47957523 47975995 + MGP_NODShiLtJ_P0051626 Gm17018 protein_coding protein_coding MGP_NODShiLtJ_T0051628.1 MGP_NODShiLtJ_G0025024.1 mouse_genomes_project 19 47975992 47977479 + Gm17018 protein_coding antisense MGP_NODShiLtJ_T0050814.1 MGP_NODShiLtJ_G0024695.1 mouse_genomes_project 19 8665684 8680628 - MGP_NODShiLtJ_P0050814 Ms4a15 protein_coding protein_coding MGP_NODShiLtJ_T0050815.1 MGP_NODShiLtJ_G0024695.1 mouse_genomes_project 19 8670550 8680559 - MGP_NODShiLtJ_P0050815 Ms4a15 protein_coding protein_coding MGP_NODShiLtJ_T0050816.1 MGP_NODShiLtJ_G0024695.1 mouse_genomes_project 19 8670636 8680608 - MGP_NODShiLtJ_P0050816 Ms4a15 protein_coding protein_coding MGP_NODShiLtJ_T0098293.1 MGP_NODShiLtJ_G0036699.1 mouse_genomes_project 19 28997602 29000364 - 4933413C19Rik sense_intronic sense_intronic MGP_NODShiLtJ_T0098152.1 MGP_NODShiLtJ_G0036564.1 mouse_genomes_project 19 38693104 38693182 - Gm22714 ribozyme ribozyme MGP_NODShiLtJ_T0007020.1 MGP_NODShiLtJ_G0005758.1 mouse_genomes_project 19 28476499 28477408 + Gm28228 lincRNA lincRNA MGP_NODShiLtJ_T0051955.1 MGP_NODShiLtJ_G0025125.1 mouse_genomes_project 19 63459481 63513338 - MGP_NODShiLtJ_P0051955 Pdzd8 protein_coding protein_coding MGP_NODShiLtJ_T0050778.1 MGP_NODShiLtJ_G0024685.1 mouse_genomes_project 19 8383338 8405289 - MGP_NODShiLtJ_P0050778 Cd5 protein_coding protein_coding MGP_NODShiLtJ_T0007006.1 MGP_NODShiLtJ_G0005747.1 mouse_genomes_project 19 8023808 8026411 - Gm26859 lincRNA lincRNA MGP_NODShiLtJ_T0097993.1 MGP_NODShiLtJ_G0036405.1 mouse_genomes_project 19 3214201 3214321 + n-R5s19 rRNA rRNA MGP_NODShiLtJ_T0051738.1 MGP_NODShiLtJ_G0025054.1 mouse_genomes_project 19 49629838 49640669 + MGP_NODShiLtJ_P0051738 Ina protein_coding protein_coding MGP_NODShiLtJ_T0051742.1 MGP_NODShiLtJ_G0025058.1 mouse_genomes_project 19 49713509 49754502 + MGP_NODShiLtJ_P0051742 Pdcd11 protein_coding protein_coding MGP_NODShiLtJ_T0051143.1 MGP_NODShiLtJ_G0024845.1 mouse_genomes_project 19 29411079 29413935 + MGP_NODShiLtJ_P0051143 Plpp6 protein_coding protein_coding MGP_NODShiLtJ_T0050554.1 MGP_NODShiLtJ_G0024612.1 mouse_genomes_project 19 4218333 4365929 + MGP_NODShiLtJ_P0050554 Macrod1 protein_coding protein_coding MGP_NODShiLtJ_T0051042.1 MGP_NODShiLtJ_G0024812.1 mouse_genomes_project 19 21330121 21362662 + MGP_NODShiLtJ_P0051042 Abhd17b protein_coding protein_coding MGP_NODShiLtJ_T0098187.1 MGP_NODShiLtJ_G0036599.1 mouse_genomes_project 19 9510843 9510982 + Gm26183 scaRNA scaRNA MGP_NODShiLtJ_T0050175.1 MGP_NODShiLtJ_G0024508.1 mouse_genomes_project 19 1796246 1798582 - Actn3 protein_coding processed_transcript MGP_NODShiLtJ_T0050176.1 MGP_NODShiLtJ_G0024508.1 mouse_genomes_project 19 1796246 1817028 - MGP_NODShiLtJ_P0050176 Actn3 protein_coding protein_coding MGP_NODShiLtJ_T0011361.1 MGP_NODShiLtJ_G0009494.1 mouse_genomes_project 19 2878578 2878730 - Gm27533 misc_RNA misc_RNA MGP_NODShiLtJ_T0050184.1 MGP_NODShiLtJ_G0024511.1 mouse_genomes_project 19 1846087 1866815 - MGP_NODShiLtJ_P0050184 Dpp3 protein_coding protein_coding MGP_NODShiLtJ_T0050888.1 MGP_NODShiLtJ_G0024720.1 mouse_genomes_project 19 9588290 9592827 + MGP_NODShiLtJ_P0050888 Mrpl16 protein_coding protein_coding MGP_NODShiLtJ_T0050960.1 MGP_NODShiLtJ_G0024775.1 mouse_genomes_project 19 11987116 11988076 + MGP_NODShiLtJ_P0050960 Olfr1491 protein_coding protein_coding MGP_NODShiLtJ_T0051810.1 MGP_NODShiLtJ_G0025082.1 mouse_genomes_project 19 56965699 56979100 - MGP_NODShiLtJ_P0051810 protein_coding protein_coding MGP_NODShiLtJ_T0050774.1 MGP_NODShiLtJ_G0024682.1 mouse_genomes_project 19 8293401 8328297 + MGP_NODShiLtJ_P0050774 Vwce protein_coding protein_coding MGP_NODShiLtJ_T0011370.1 MGP_NODShiLtJ_G0009503.1 mouse_genomes_project 19 33896523 33896882 - Gm22482 misc_RNA misc_RNA MGP_NODShiLtJ_T0051580.1 MGP_NODShiLtJ_G0025003.1 mouse_genomes_project 19 46553825 46567031 + MGP_NODShiLtJ_P0051580 Scd2 protein_coding protein_coding MGP_NODShiLtJ_T0051272.1 MGP_NODShiLtJ_G0024898.1 mouse_genomes_project 19 35769166 35778815 + MGP_NODShiLtJ_P0051272 Ifit1 protein_coding protein_coding MGP_NODShiLtJ_T0050383.1 MGP_NODShiLtJ_G0024576.1 mouse_genomes_project 19 3169557 3183820 + MGP_NODShiLtJ_P0050383 Naaladl1 protein_coding protein_coding MGP_NODShiLtJ_T0049957.1 MGP_NODShiLtJ_G0024452.1 mouse_genomes_project 19 39382 49318 + MGP_NODShiLtJ_P0049957 Mrpl21 protein_coding protein_coding MGP_NODShiLtJ_T0049958.1 MGP_NODShiLtJ_G0024452.1 mouse_genomes_project 19 39536 45660 + Mrpl21 protein_coding retained_intron MGP_NODShiLtJ_T0049959.1 MGP_NODShiLtJ_G0024452.1 mouse_genomes_project 19 39541 41806 + Mrpl21 protein_coding retained_intron MGP_NODShiLtJ_T0049960.1 MGP_NODShiLtJ_G0024452.1 mouse_genomes_project 19 39541 47682 + MGP_NODShiLtJ_P0049960 Mrpl21 protein_coding protein_coding MGP_NODShiLtJ_T0049961.1 MGP_NODShiLtJ_G0024452.1 mouse_genomes_project 19 39545 44220 + MGP_NODShiLtJ_P0049961 Mrpl21 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049962.1 MGP_NODShiLtJ_G0024452.1 mouse_genomes_project 19 43291 47676 + Mrpl21 protein_coding retained_intron MGP_NODShiLtJ_T0000995.1 MGP_NODShiLtJ_G0000921.1 mouse_genomes_project 19 13133746 13134013 + TEC TEC MGP_NODShiLtJ_T0050102.1 MGP_NODShiLtJ_G0024487.1 mouse_genomes_project 19 1099809 1109060 + MGP_NODShiLtJ_P0050102 Clcf1 protein_coding protein_coding MGP_NODShiLtJ_T0050103.1 MGP_NODShiLtJ_G0024487.1 mouse_genomes_project 19 1099835 1109060 + Clcf1 protein_coding retained_intron MGP_NODShiLtJ_T0050104.1 MGP_NODShiLtJ_G0024487.1 mouse_genomes_project 19 1099876 1109060 + MGP_NODShiLtJ_P0050104 Clcf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050105.1 MGP_NODShiLtJ_G0024487.1 mouse_genomes_project 19 1100165 1108083 + Clcf1 protein_coding processed_transcript MGP_NODShiLtJ_T0011369.1 MGP_NODShiLtJ_G0009502.1 mouse_genomes_project 19 31381184 31381502 + Gm23426 misc_RNA misc_RNA MGP_NODShiLtJ_T0050910.1 MGP_NODShiLtJ_G0024740.1 mouse_genomes_project 19 10327907 10332335 + MGP_NODShiLtJ_P0050910 Mpeg1 protein_coding protein_coding MGP_NODShiLtJ_T0051230.1 MGP_NODShiLtJ_G0024873.1 mouse_genomes_project 19 33546426 33588601 - MGP_NODShiLtJ_P0051230 Atad1 protein_coding protein_coding MGP_NODShiLtJ_T0007005.1 MGP_NODShiLtJ_G0005746.1 mouse_genomes_project 19 3770311 3771797 + Gm14968 lincRNA lincRNA MGP_NODShiLtJ_T0050940.1 MGP_NODShiLtJ_G0024755.1 mouse_genomes_project 19 10871058 10872003 - MGP_NODShiLtJ_P0050940 Olfr1448 protein_coding protein_coding MGP_NODShiLtJ_T0050295.1 MGP_NODShiLtJ_G0024552.1 mouse_genomes_project 19 2726469 2729204 + MGP_NODShiLtJ_P0050295 Kcnk7 protein_coding protein_coding MGP_NODShiLtJ_T0010222.1 MGP_NODShiLtJ_G0008355.1 mouse_genomes_project 19 50426862 50426998 - Mir8090 miRNA miRNA MGP_NODShiLtJ_T0050838.1 MGP_NODShiLtJ_G0024704.1 mouse_genomes_project 19 9019183 9034670 - MGP_NODShiLtJ_P0050838 Ms4a14 protein_coding protein_coding MGP_NODShiLtJ_T0050049.1 MGP_NODShiLtJ_G0024473.1 mouse_genomes_project 19 927679 929649 - MGP_NODShiLtJ_P0050049 BC021614 protein_coding protein_coding MGP_NODShiLtJ_T0050050.1 MGP_NODShiLtJ_G0024473.1 mouse_genomes_project 19 927680 929498 - MGP_NODShiLtJ_P0050050 BC021614 protein_coding protein_coding MGP_NODShiLtJ_T0011374.1 MGP_NODShiLtJ_G0009507.1 mouse_genomes_project 19 43792965 43793203 + Gm22601 misc_RNA misc_RNA MGP_NODShiLtJ_T0007011.1 MGP_NODShiLtJ_G0005752.1 mouse_genomes_project 19 14627900 14654921 + C130060C02Rik lincRNA lincRNA MGP_NODShiLtJ_T0050717.1 MGP_NODShiLtJ_G0024656.1 mouse_genomes_project 19 6371267 6383380 + MGP_NODShiLtJ_P0050717 Eef1g protein_coding protein_coding MGP_NODShiLtJ_T0050718.1 MGP_NODShiLtJ_G0024656.1 mouse_genomes_project 19 6371796 6376743 + Eef1g protein_coding processed_transcript MGP_NODShiLtJ_T0050719.1 MGP_NODShiLtJ_G0024656.1 mouse_genomes_project 19 6372442 6376863 + Eef1g protein_coding processed_transcript MGP_NODShiLtJ_T0050720.1 MGP_NODShiLtJ_G0024656.1 mouse_genomes_project 19 6372442 6374428 + Eef1g protein_coding retained_intron MGP_NODShiLtJ_T0050721.1 MGP_NODShiLtJ_G0024656.1 mouse_genomes_project 19 6372442 6373733 + Eef1g protein_coding retained_intron MGP_NODShiLtJ_T0050722.1 MGP_NODShiLtJ_G0024656.1 mouse_genomes_project 19 6376630 6384452 + Eef1g protein_coding retained_intron MGP_NODShiLtJ_T0050596.1 MGP_NODShiLtJ_G0024622.1 mouse_genomes_project 19 4699318 4751419 + MGP_NODShiLtJ_P0050596 Atl3 protein_coding protein_coding MGP_NODShiLtJ_T0050597.1 MGP_NODShiLtJ_G0024622.1 mouse_genomes_project 19 4699716 4751419 + MGP_NODShiLtJ_P0050597 Atl3 protein_coding protein_coding MGP_NODShiLtJ_T0003799.1 MGP_NODShiLtJ_G0003399.1 mouse_genomes_project 19 4479015 4485874 + Gm17227 antisense antisense MGP_NODShiLtJ_T0003800.1 MGP_NODShiLtJ_G0003399.1 mouse_genomes_project 19 4479091 4485696 + Gm17227 antisense antisense MGP_NODShiLtJ_T0050764.1 MGP_NODShiLtJ_G0024676.1 mouse_genomes_project 19 8164540 8201395 + MGP_NODShiLtJ_P0050764 Cpsf7 protein_coding protein_coding MGP_NODShiLtJ_T0051401.1 MGP_NODShiLtJ_G0024946.1 mouse_genomes_project 19 42274755 42381264 - MGP_NODShiLtJ_P0051401 Sorbs1 protein_coding protein_coding MGP_NODShiLtJ_T0051402.1 MGP_NODShiLtJ_G0024946.1 mouse_genomes_project 19 42274755 42381264 - MGP_NODShiLtJ_P0051402 Sorbs1 protein_coding protein_coding MGP_NODShiLtJ_T0051403.1 MGP_NODShiLtJ_G0024946.1 mouse_genomes_project 19 42274755 42381264 - MGP_NODShiLtJ_P0051403 Sorbs1 protein_coding protein_coding MGP_NODShiLtJ_T0051404.1 MGP_NODShiLtJ_G0024946.1 mouse_genomes_project 19 42274755 42381264 - MGP_NODShiLtJ_P0051404 Sorbs1 protein_coding protein_coding MGP_NODShiLtJ_T0051405.1 MGP_NODShiLtJ_G0024946.1 mouse_genomes_project 19 42289188 42381264 - MGP_NODShiLtJ_P0051405 Sorbs1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010203.1 MGP_NODShiLtJ_G0008336.1 mouse_genomes_project 19 22997119 22997240 + Mir1192 miRNA miRNA MGP_NODShiLtJ_T0007009.1 MGP_NODShiLtJ_G0005750.1 mouse_genomes_project 19 9086778 9089200 + lincRNA lincRNA MGP_NODShiLtJ_T0050060.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 978038 992003 + MGP_NODShiLtJ_P0050060 Pitpnm1 protein_coding protein_coding MGP_NODShiLtJ_T0050061.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 978086 992003 + Pitpnm1 protein_coding retained_intron MGP_NODShiLtJ_T0050062.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 978309 982967 + MGP_NODShiLtJ_P0050062 Pitpnm1 protein_coding protein_coding MGP_NODShiLtJ_T0050063.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 978662 992003 + MGP_NODShiLtJ_P0050063 Pitpnm1 protein_coding protein_coding MGP_NODShiLtJ_T0050064.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 986241 987945 + Pitpnm1 protein_coding retained_intron MGP_NODShiLtJ_T0050065.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 986789 990255 + Pitpnm1 protein_coding processed_transcript MGP_NODShiLtJ_T0050066.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 987685 988772 + Pitpnm1 protein_coding retained_intron MGP_NODShiLtJ_T0050067.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 988837 990062 + Pitpnm1 protein_coding retained_intron MGP_NODShiLtJ_T0050068.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 989198 990409 + Pitpnm1 protein_coding retained_intron MGP_NODShiLtJ_T0050069.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 989966 991653 + Pitpnm1 protein_coding retained_intron MGP_NODShiLtJ_T0050070.1 MGP_NODShiLtJ_G0024476.1 mouse_genomes_project 19 990357 992003 + Pitpnm1 protein_coding retained_intron MGP_NODShiLtJ_T0050737.1 MGP_NODShiLtJ_G0024665.1 mouse_genomes_project 19 7649008 7667104 + MGP_NODShiLtJ_P0050737 Fads3 protein_coding protein_coding MGP_NODShiLtJ_T0099068.1 MGP_NODShiLtJ_G0037462.1 mouse_genomes_project 19 16741877 16741980 - Gm22880 snRNA snRNA MGP_NODShiLtJ_T0017564.1 MGP_NODShiLtJ_G0015253.1 mouse_genomes_project 19 10465606 10474485 - A330040F15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0099074.1 MGP_NODShiLtJ_G0037468.1 mouse_genomes_project 19 35945291 35945452 + Gm22082 snRNA snRNA MGP_NODShiLtJ_T0051823.1 MGP_NODShiLtJ_G0025088.1 mouse_genomes_project 19 57599203 57614701 - MGP_NODShiLtJ_P0051823 Bbip1 protein_coding protein_coding MGP_NODShiLtJ_T0050937.1 MGP_NODShiLtJ_G0024752.1 mouse_genomes_project 19 10815706 10816707 + MGP_NODShiLtJ_P0050937 Olfr1445 protein_coding protein_coding MGP_NODShiLtJ_T0051518.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44874862 44899667 - MGP_NODShiLtJ_P0051518 Hps1 protein_coding protein_coding MGP_NODShiLtJ_T0051519.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44874952 44899648 - Hps1 protein_coding retained_intron MGP_NODShiLtJ_T0051520.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44874952 44898335 - MGP_NODShiLtJ_P0051520 Hps1 protein_coding protein_coding MGP_NODShiLtJ_T0051521.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44874954 44899665 - MGP_NODShiLtJ_P0051521 Hps1 protein_coding protein_coding MGP_NODShiLtJ_T0051522.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44875338 44877574 - MGP_NODShiLtJ_P0051522 Hps1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051523.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44877825 44899654 - MGP_NODShiLtJ_P0051523 Hps1 protein_coding protein_coding MGP_NODShiLtJ_T0051524.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44878225 44897950 - MGP_NODShiLtJ_P0051524 Hps1 protein_coding protein_coding MGP_NODShiLtJ_T0051525.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44880110 44883623 - Hps1 protein_coding retained_intron MGP_NODShiLtJ_T0051526.1 MGP_NODShiLtJ_G0024984.1 mouse_genomes_project 19 44886541 44889543 - Hps1 protein_coding retained_intron MGP_NODShiLtJ_T0011363.1 MGP_NODShiLtJ_G0009496.1 mouse_genomes_project 19 2879208 2879330 - Gm28006 misc_RNA misc_RNA MGP_NODShiLtJ_T0051558.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46285628 46322119 - MGP_NODShiLtJ_P0051558 Erlin1 protein_coding protein_coding MGP_NODShiLtJ_T0051559.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46285628 46322368 - MGP_NODShiLtJ_P0051559 Erlin1 protein_coding protein_coding MGP_NODShiLtJ_T0051560.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46285628 46322378 - MGP_NODShiLtJ_P0051560 Erlin1 protein_coding protein_coding MGP_NODShiLtJ_T0051561.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46308757 46322349 - MGP_NODShiLtJ_P0051561 Erlin1 protein_coding protein_coding MGP_NODShiLtJ_T0051562.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46311658 46321990 - MGP_NODShiLtJ_P0051562 Erlin1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051563.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46311660 46320279 - MGP_NODShiLtJ_P0051563 Erlin1 protein_coding protein_coding MGP_NODShiLtJ_T0051564.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46318632 46322337 - Erlin1 protein_coding retained_intron MGP_NODShiLtJ_T0051565.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46320068 46322289 - Erlin1 protein_coding retained_intron MGP_NODShiLtJ_T0051566.1 MGP_NODShiLtJ_G0024997.1 mouse_genomes_project 19 46321910 46322283 - MGP_NODShiLtJ_P0051566 Erlin1 protein_coding protein_coding MGP_NODShiLtJ_T0010209.1 MGP_NODShiLtJ_G0008342.1 mouse_genomes_project 19 35974921 35975008 - Mir107 miRNA miRNA MGP_NODShiLtJ_T0003826.1 MGP_NODShiLtJ_G0003420.1 mouse_genomes_project 19 63595383 63630120 - Emx2os antisense antisense MGP_NODShiLtJ_T0050296.1 MGP_NODShiLtJ_G0024553.1 mouse_genomes_project 19 2729478 2748371 - MGP_NODShiLtJ_P0050296 Ehbp1l1 protein_coding protein_coding MGP_NODShiLtJ_T0050297.1 MGP_NODShiLtJ_G0024553.1 mouse_genomes_project 19 2729478 2748371 - MGP_NODShiLtJ_P0050297 Ehbp1l1 protein_coding protein_coding MGP_NODShiLtJ_T0003816.1 MGP_NODShiLtJ_G0003410.1 mouse_genomes_project 19 47082837 47093566 - Gm20395 antisense antisense MGP_NODShiLtJ_T0049976.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 582503 637610 + MGP_NODShiLtJ_P0049976 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049977.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 582503 648603 + MGP_NODShiLtJ_P0049977 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049978.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 582503 646692 + MGP_NODShiLtJ_P0049978 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049979.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 582503 648604 + MGP_NODShiLtJ_P0049979 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049980.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 582503 646692 + MGP_NODShiLtJ_P0049980 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049981.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 582605 634418 + MGP_NODShiLtJ_P0049981 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049982.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583115 637616 + MGP_NODShiLtJ_P0049982 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049983.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583200 633151 + MGP_NODShiLtJ_P0049983 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049984.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583216 601088 + Suv420h1 protein_coding retained_intron MGP_NODShiLtJ_T0049985.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583231 632596 + MGP_NODShiLtJ_P0049985 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049986.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583248 646989 + MGP_NODShiLtJ_P0049986 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049987.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583251 612440 + MGP_NODShiLtJ_P0049987 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049988.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583300 637588 + MGP_NODShiLtJ_P0049988 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049989.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583315 612458 + MGP_NODShiLtJ_P0049989 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049990.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 583629 615933 + MGP_NODShiLtJ_P0049990 Suv420h1 protein_coding protein_coding MGP_NODShiLtJ_T0049991.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 610992 618818 + Suv420h1 protein_coding retained_intron MGP_NODShiLtJ_T0049992.1 MGP_NODShiLtJ_G0024459.1 mouse_genomes_project 19 632487 635496 + Suv420h1 protein_coding retained_intron MGP_NODShiLtJ_T0007004.1 MGP_NODShiLtJ_G0005745.1 mouse_genomes_project 19 3062546 3068350 + Gm10814 lincRNA lincRNA MGP_NODShiLtJ_T0050899.1 MGP_NODShiLtJ_G0024729.1 mouse_genomes_project 19 10000771 10001716 - MGP_NODShiLtJ_P0050899 Olfr1428 protein_coding protein_coding MGP_NODShiLtJ_T0051615.1 MGP_NODShiLtJ_G0025018.1 mouse_genomes_project 19 47385960 47394901 + MGP_NODShiLtJ_P0051615 Sfxn3 protein_coding protein_coding MGP_NODShiLtJ_T0051616.1 MGP_NODShiLtJ_G0025018.1 mouse_genomes_project 19 47385960 47394901 + MGP_NODShiLtJ_P0051616 Sfxn3 protein_coding protein_coding MGP_NODShiLtJ_T0051617.1 MGP_NODShiLtJ_G0025018.1 mouse_genomes_project 19 47385960 47394901 + MGP_NODShiLtJ_P0051617 Sfxn3 protein_coding protein_coding MGP_NODShiLtJ_T0050598.1 MGP_NODShiLtJ_G0024623.1 mouse_genomes_project 19 4769979 4805198 + MGP_NODShiLtJ_P0050598 Pla2g16 protein_coding protein_coding MGP_NODShiLtJ_T0050599.1 MGP_NODShiLtJ_G0024623.1 mouse_genomes_project 19 4769979 4798381 + MGP_NODShiLtJ_P0050599 Pla2g16 protein_coding protein_coding MGP_NODShiLtJ_T0050600.1 MGP_NODShiLtJ_G0024623.1 mouse_genomes_project 19 4769997 4795786 + MGP_NODShiLtJ_P0050600 Pla2g16 protein_coding protein_coding MGP_NODShiLtJ_T0050601.1 MGP_NODShiLtJ_G0024623.1 mouse_genomes_project 19 4770005 4803364 + MGP_NODShiLtJ_P0050601 Pla2g16 protein_coding protein_coding MGP_NODShiLtJ_T0050779.1 MGP_NODShiLtJ_G0024686.1 mouse_genomes_project 19 8462175 8504525 - MGP_NODShiLtJ_P0050779 Cd6 protein_coding protein_coding MGP_NODShiLtJ_T0050780.1 MGP_NODShiLtJ_G0024686.1 mouse_genomes_project 19 8462180 8471579 - Cd6 protein_coding retained_intron MGP_NODShiLtJ_T0050781.1 MGP_NODShiLtJ_G0024686.1 mouse_genomes_project 19 8462183 8504431 - MGP_NODShiLtJ_P0050781 Cd6 protein_coding protein_coding MGP_NODShiLtJ_T0050782.1 MGP_NODShiLtJ_G0024686.1 mouse_genomes_project 19 8463820 8465823 - Cd6 protein_coding retained_intron MGP_NODShiLtJ_T0050783.1 MGP_NODShiLtJ_G0024686.1 mouse_genomes_project 19 8467398 8504323 - MGP_NODShiLtJ_P0050783 Cd6 protein_coding protein_coding MGP_NODShiLtJ_T0050772.1 MGP_NODShiLtJ_G0024680.1 mouse_genomes_project 19 8249110 8261168 - MGP_NODShiLtJ_P0050772 Tkfc protein_coding protein_coding MGP_NODShiLtJ_T0051740.1 MGP_NODShiLtJ_G0025056.1 mouse_genomes_project 19 49689096 49706307 + MGP_NODShiLtJ_P0051740 Taf5 protein_coding protein_coding MGP_NODShiLtJ_T0050207.1 MGP_NODShiLtJ_G0024523.1 mouse_genomes_project 19 2047854 2055645 - MGP_NODShiLtJ_P0050207 Rab1b protein_coding protein_coding MGP_NODShiLtJ_T0051962.1 MGP_NODShiLtJ_G0025128.1 mouse_genomes_project 19 64436117 64464758 - MGP_NODShiLtJ_P0051962 Fam204a protein_coding protein_coding MGP_NODShiLtJ_T0013251.1 MGP_NODShiLtJ_G0011359.1 mouse_genomes_project 19 3219011 3219497 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010202.1 MGP_NODShiLtJ_G0008335.1 mouse_genomes_project 19 22541770 22541838 + Mir204 miRNA miRNA MGP_NODShiLtJ_T0003791.1 MGP_NODShiLtJ_G0003394.1 mouse_genomes_project 19 2749258 2753679 + Gm16538 antisense antisense MGP_NODShiLtJ_T0050077.1 MGP_NODShiLtJ_G0024479.1 mouse_genomes_project 19 1020397 1026406 + MGP_NODShiLtJ_P0050077 Gpr152 protein_coding protein_coding MGP_NODShiLtJ_T0050271.1 MGP_NODShiLtJ_G0024546.1 mouse_genomes_project 19 2615514 2617081 + MGP_NODShiLtJ_P0050271 Rnaseh2c protein_coding protein_coding MGP_NODShiLtJ_T0050272.1 MGP_NODShiLtJ_G0024546.1 mouse_genomes_project 19 2615528 2616509 + Rnaseh2c protein_coding retained_intron MGP_NODShiLtJ_T0050273.1 MGP_NODShiLtJ_G0024546.1 mouse_genomes_project 19 2615616 2616574 + Rnaseh2c protein_coding retained_intron MGP_NODShiLtJ_T0050274.1 MGP_NODShiLtJ_G0024546.1 mouse_genomes_project 19 2615876 2616580 + MGP_NODShiLtJ_P0050274 Rnaseh2c protein_coding protein_coding MGP_NODShiLtJ_T0050275.1 MGP_NODShiLtJ_G0024546.1 mouse_genomes_project 19 2616051 2616576 + Rnaseh2c protein_coding retained_intron MGP_NODShiLtJ_T0051328.1 MGP_NODShiLtJ_G0024915.1 mouse_genomes_project 19 39017894 39023508 + MGP_NODShiLtJ_P0051328 Hhex protein_coding protein_coding MGP_NODShiLtJ_T0050185.1 MGP_NODShiLtJ_G0024512.1 mouse_genomes_project 19 1869170 1884375 - MGP_NODShiLtJ_P0050185 Peli3 protein_coding protein_coding MGP_NODShiLtJ_T0050186.1 MGP_NODShiLtJ_G0024512.1 mouse_genomes_project 19 1870374 1884393 - MGP_NODShiLtJ_P0050186 Peli3 protein_coding protein_coding MGP_NODShiLtJ_T0050187.1 MGP_NODShiLtJ_G0024512.1 mouse_genomes_project 19 1875030 1878673 - Peli3 protein_coding retained_intron MGP_NODShiLtJ_T0050188.1 MGP_NODShiLtJ_G0024512.1 mouse_genomes_project 19 1875056 1884381 - Peli3 protein_coding processed_transcript MGP_NODShiLtJ_T0050189.1 MGP_NODShiLtJ_G0024512.1 mouse_genomes_project 19 1875060 1884356 - MGP_NODShiLtJ_P0050189 Peli3 protein_coding protein_coding MGP_NODShiLtJ_T0050190.1 MGP_NODShiLtJ_G0024512.1 mouse_genomes_project 19 1875067 1884350 - Peli3 protein_coding processed_transcript MGP_NODShiLtJ_T0050191.1 MGP_NODShiLtJ_G0024512.1 mouse_genomes_project 19 1882882 1884329 - Peli3 protein_coding retained_intron MGP_NODShiLtJ_T0010190.1 MGP_NODShiLtJ_G0008323.1 mouse_genomes_project 19 3445238 3445303 + Mir6989 miRNA miRNA MGP_NODShiLtJ_T0007047.1 MGP_NODShiLtJ_G0005777.1 mouse_genomes_project 19 48865372 48868627 + Gm26792 lincRNA lincRNA MGP_NODShiLtJ_T0098166.1 MGP_NODShiLtJ_G0036578.1 mouse_genomes_project 19 2858935 2858991 - Gm27702 sRNA sRNA MGP_NODShiLtJ_T0051379.1 MGP_NODShiLtJ_G0024938.1 mouse_genomes_project 19 41386990 41742121 - MGP_NODShiLtJ_P0051379 protein_coding protein_coding MGP_NODShiLtJ_T0051381.1 MGP_NODShiLtJ_G0024938.1 mouse_genomes_project 19 41387146 41742121 - MGP_NODShiLtJ_P0051381 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051382.1 MGP_NODShiLtJ_G0024938.1 mouse_genomes_project 19 41418474 41432460 - protein_coding retained_intron MGP_NODShiLtJ_T0051384.1 MGP_NODShiLtJ_G0024938.1 mouse_genomes_project 19 41556798 41564039 - protein_coding processed_transcript MGP_NODShiLtJ_T0051385.1 MGP_NODShiLtJ_G0024938.1 mouse_genomes_project 19 41561932 41564034 - MGP_NODShiLtJ_P0051385 protein_coding protein_coding MGP_NODShiLtJ_T0050225.1 MGP_NODShiLtJ_G0024532.1 mouse_genomes_project 19 2352240 2363191 - MGP_NODShiLtJ_P0050225 Sart1 protein_coding protein_coding MGP_NODShiLtJ_T0050158.1 MGP_NODShiLtJ_G0024502.1 mouse_genomes_project 19 1678534 1688294 + protein_coding retained_intron MGP_NODShiLtJ_T0050159.1 MGP_NODShiLtJ_G0024502.1 mouse_genomes_project 19 1678555 1686119 + protein_coding processed_transcript MGP_NODShiLtJ_T0050160.1 MGP_NODShiLtJ_G0024502.1 mouse_genomes_project 19 1678556 1686760 + protein_coding retained_intron MGP_NODShiLtJ_T0050161.1 MGP_NODShiLtJ_G0024502.1 mouse_genomes_project 19 1686813 1692485 + protein_coding retained_intron MGP_NODShiLtJ_T0050162.1 MGP_NODShiLtJ_G0024502.1 mouse_genomes_project 19 1689882 1691061 + protein_coding processed_transcript MGP_NODShiLtJ_T0051180.1 MGP_NODShiLtJ_G0024858.1 mouse_genomes_project 19 30248304 30290811 - MGP_NODShiLtJ_P0051180 9930021J03Rik protein_coding protein_coding MGP_NODShiLtJ_T0051181.1 MGP_NODShiLtJ_G0024858.1 mouse_genomes_project 19 30249518 30346806 - MGP_NODShiLtJ_P0051181 9930021J03Rik protein_coding protein_coding MGP_NODShiLtJ_T0051182.1 MGP_NODShiLtJ_G0024858.1 mouse_genomes_project 19 30249951 30346664 - MGP_NODShiLtJ_P0051182 9930021J03Rik protein_coding protein_coding MGP_NODShiLtJ_T0051183.1 MGP_NODShiLtJ_G0024858.1 mouse_genomes_project 19 30254665 30290873 - MGP_NODShiLtJ_P0051183 9930021J03Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049964.1 MGP_NODShiLtJ_G0024454.1 mouse_genomes_project 19 156485 165857 + MGP_NODShiLtJ_P0049964 Mtl5 protein_coding protein_coding MGP_NODShiLtJ_T0049965.1 MGP_NODShiLtJ_G0024454.1 mouse_genomes_project 19 156550 174799 + MGP_NODShiLtJ_P0049965 Mtl5 protein_coding protein_coding MGP_NODShiLtJ_T0051607.1 MGP_NODShiLtJ_G0025014.1 mouse_genomes_project 19 47337149 47338578 - MGP_NODShiLtJ_P0051607 Mrpl43 protein_coding protein_coding MGP_NODShiLtJ_T0051370.1 MGP_NODShiLtJ_G0024932.1 mouse_genomes_project 19 40821551 40852503 + MGP_NODShiLtJ_P0051370 Cyp2c65 protein_coding protein_coding MGP_NODShiLtJ_T0013255.1 MGP_NODShiLtJ_G0011363.1 mouse_genomes_project 19 5946484 5948288 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050738.1 MGP_NODShiLtJ_G0024666.1 mouse_genomes_project 19 7673207 7710401 - MGP_NODShiLtJ_P0050738 Fads2 protein_coding protein_coding MGP_NODShiLtJ_T0051369.1 MGP_NODShiLtJ_G0024931.1 mouse_genomes_project 19 40771559 40807536 + MGP_NODShiLtJ_P0051369 Cyp2c55 protein_coding protein_coding MGP_NODShiLtJ_T0100330.1 MGP_NODShiLtJ_G0038724.1 mouse_genomes_project 19 37118887 37119020 - Gm25611 snoRNA snoRNA MGP_NODShiLtJ_T0051678.1 MGP_NODShiLtJ_G0025034.1 mouse_genomes_project 19 48593047 48604033 + MGP_NODShiLtJ_P0051678 Nolc1 protein_coding protein_coding MGP_NODShiLtJ_T0051679.1 MGP_NODShiLtJ_G0025034.1 mouse_genomes_project 19 48593214 48604042 + MGP_NODShiLtJ_P0051679 Nolc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051493.1 MGP_NODShiLtJ_G0024976.1 mouse_genomes_project 19 44237251 44241554 + MGP_NODShiLtJ_P0051493 Marveld1 protein_coding protein_coding MGP_NODShiLtJ_T0051494.1 MGP_NODShiLtJ_G0024976.1 mouse_genomes_project 19 44237559 44241313 + MGP_NODShiLtJ_P0051494 Marveld1 protein_coding protein_coding MGP_NODShiLtJ_T0050997.1 MGP_NODShiLtJ_G0024797.1 mouse_genomes_project 19 16261616 16710643 - MGP_NODShiLtJ_P0050997 Pcsk5 protein_coding protein_coding MGP_NODShiLtJ_T0050998.1 MGP_NODShiLtJ_G0024797.1 mouse_genomes_project 19 16394377 16710643 - MGP_NODShiLtJ_P0050998 Pcsk5 protein_coding protein_coding MGP_NODShiLtJ_T0051306.1 MGP_NODShiLtJ_G0024910.1 mouse_genomes_project 19 38450308 38547753 + MGP_NODShiLtJ_P0051306 Btaf1 protein_coding protein_coding MGP_NODShiLtJ_T0097994.1 MGP_NODShiLtJ_G0036406.1 mouse_genomes_project 19 4438834 4438955 + Gm23997 rRNA rRNA MGP_NODShiLtJ_T0100310.1 MGP_NODShiLtJ_G0038704.1 mouse_genomes_project 19 954098 954313 - Gm23927 snoRNA snoRNA MGP_NODShiLtJ_T0003819.1 MGP_NODShiLtJ_G0003413.1 mouse_genomes_project 19 48169275 48172913 + Gm15491 antisense antisense MGP_NODShiLtJ_T0007049.1 MGP_NODShiLtJ_G0005779.1 mouse_genomes_project 19 56625642 56633808 + 1700054A03Rik lincRNA lincRNA MGP_NODShiLtJ_T0007050.1 MGP_NODShiLtJ_G0005779.1 mouse_genomes_project 19 56625676 56633808 + 1700054A03Rik lincRNA lincRNA MGP_NODShiLtJ_T0050240.1 MGP_NODShiLtJ_G0024539.1 mouse_genomes_project 19 2454132 2457390 - MGP_NODShiLtJ_P0050240 Ctsw protein_coding protein_coding MGP_NODShiLtJ_T0051727.1 MGP_NODShiLtJ_G0025049.1 mouse_genomes_project 19 49258196 49264006 - MGP_NODShiLtJ_P0051727 Cyp17a1 protein_coding protein_coding MGP_NODShiLtJ_T0051728.1 MGP_NODShiLtJ_G0025049.1 mouse_genomes_project 19 49259118 49260545 - Cyp17a1 protein_coding retained_intron MGP_NODShiLtJ_T0051729.1 MGP_NODShiLtJ_G0025049.1 mouse_genomes_project 19 49261757 49262323 - Cyp17a1 protein_coding retained_intron MGP_NODShiLtJ_T0050617.1 MGP_NODShiLtJ_G0024631.1 mouse_genomes_project 19 6033647 6048998 + MGP_NODShiLtJ_P0050617 Chrm1 protein_coding protein_coding MGP_NODShiLtJ_T0050618.1 MGP_NODShiLtJ_G0024631.1 mouse_genomes_project 19 6033861 6054431 + MGP_NODShiLtJ_P0050618 Chrm1 protein_coding protein_coding MGP_NODShiLtJ_T0050619.1 MGP_NODShiLtJ_G0024631.1 mouse_genomes_project 19 6033861 6052411 + MGP_NODShiLtJ_P0050619 Chrm1 protein_coding protein_coding MGP_NODShiLtJ_T0051229.1 MGP_NODShiLtJ_G0024872.1 mouse_genomes_project 19 33481865 33540793 + MGP_NODShiLtJ_P0051229 Papss2 protein_coding protein_coding MGP_NODShiLtJ_T0050174.1 MGP_NODShiLtJ_G0024507.1 mouse_genomes_project 19 1790152 1795936 + MGP_NODShiLtJ_P0050174 Ctsf protein_coding protein_coding MGP_NODShiLtJ_T0007033.1 MGP_NODShiLtJ_G0005767.1 mouse_genomes_project 19 39691422 39694414 - I830134H01Rik lincRNA lincRNA MGP_NODShiLtJ_T0007034.1 MGP_NODShiLtJ_G0005767.1 mouse_genomes_project 19 39691532 39694414 - I830134H01Rik lincRNA lincRNA MGP_NODShiLtJ_T0051295.1 MGP_NODShiLtJ_G0024907.1 mouse_genomes_project 19 38219752 38224669 - MGP_NODShiLtJ_P0051295 Ppp1r3c protein_coding protein_coding MGP_NODShiLtJ_T0051443.1 MGP_NODShiLtJ_G0024958.1 mouse_genomes_project 19 43513655 43598715 + MGP_NODShiLtJ_P0051443 Lcor protein_coding protein_coding MGP_NODShiLtJ_T0051444.1 MGP_NODShiLtJ_G0024958.1 mouse_genomes_project 19 43585968 43596250 + MGP_NODShiLtJ_P0051444 Lcor protein_coding protein_coding MGP_NODShiLtJ_T0003796.1 MGP_NODShiLtJ_G0003397.1 mouse_genomes_project 19 3643417 3644702 - Gm14964 antisense antisense MGP_NODShiLtJ_T0003797.1 MGP_NODShiLtJ_G0003397.1 mouse_genomes_project 19 3643495 3644479 - Gm14964 antisense antisense MGP_NODShiLtJ_T0051576.1 MGP_NODShiLtJ_G0025001.1 mouse_genomes_project 19 46406718 46448235 - MGP_NODShiLtJ_P0051576 Pkd2l1 protein_coding protein_coding MGP_NODShiLtJ_T0051577.1 MGP_NODShiLtJ_G0025001.1 mouse_genomes_project 19 46406719 46448235 - Pkd2l1 protein_coding retained_intron MGP_NODShiLtJ_T0051578.1 MGP_NODShiLtJ_G0025001.1 mouse_genomes_project 19 46407588 46451002 - MGP_NODShiLtJ_P0051578 Pkd2l1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0010224.1 MGP_NODShiLtJ_G0008357.1 mouse_genomes_project 19 52670998 52671077 - Gm27935 miRNA miRNA MGP_NODShiLtJ_T0050906.1 MGP_NODShiLtJ_G0024736.1 mouse_genomes_project 19 10169031 10169675 - MGP_NODShiLtJ_P0050906 protein_coding protein_coding MGP_NODShiLtJ_T0098188.1 MGP_NODShiLtJ_G0036600.1 mouse_genomes_project 19 9511069 9511145 + Gm25443 scaRNA scaRNA MGP_NODShiLtJ_T0050173.1 MGP_NODShiLtJ_G0024506.1 mouse_genomes_project 19 1771954 1775117 + MGP_NODShiLtJ_P0050173 Ccdc87 protein_coding protein_coding MGP_NODShiLtJ_T0011368.1 MGP_NODShiLtJ_G0009501.1 mouse_genomes_project 19 30870640 30870921 + Gm24883 misc_RNA misc_RNA MGP_NODShiLtJ_T0100314.1 MGP_NODShiLtJ_G0038708.1 mouse_genomes_project 19 6101612 6101688 + Gm24453 snoRNA snoRNA MGP_NODShiLtJ_T0050193.1 MGP_NODShiLtJ_G0024514.1 mouse_genomes_project 19 1929160 1934777 - MGP_NODShiLtJ_P0050193 Npas4 protein_coding protein_coding MGP_NODShiLtJ_T0051826.1 MGP_NODShiLtJ_G0025091.1 mouse_genomes_project 19 58860515 58892964 - MGP_NODShiLtJ_P0051826 Gpam protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051827.1 MGP_NODShiLtJ_G0025091.1 mouse_genomes_project 19 58862617 58894817 - MGP_NODShiLtJ_P0051827 Gpam protein_coding protein_coding MGP_NODShiLtJ_T0010184.1 MGP_NODShiLtJ_G0008317.1 mouse_genomes_project 19 1152848 1152909 - Mir6985 miRNA miRNA MGP_NODShiLtJ_T0050725.1 MGP_NODShiLtJ_G0024658.1 mouse_genomes_project 19 6488409 6492658 - MGP_NODShiLtJ_P0050725 Scgb1a1 protein_coding protein_coding MGP_NODShiLtJ_T0051604.1 MGP_NODShiLtJ_G0025013.1 mouse_genomes_project 19 47320196 47335533 + MGP_NODShiLtJ_P0051604 Sema4g protein_coding protein_coding MGP_NODShiLtJ_T0051605.1 MGP_NODShiLtJ_G0025013.1 mouse_genomes_project 19 47320386 47335533 + MGP_NODShiLtJ_P0051605 Sema4g protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051606.1 MGP_NODShiLtJ_G0025013.1 mouse_genomes_project 19 47323250 47335530 + MGP_NODShiLtJ_P0051606 Sema4g protein_coding protein_coding MGP_NODShiLtJ_T0050897.1 MGP_NODShiLtJ_G0024727.1 mouse_genomes_project 19 9976698 9982092 - MGP_NODShiLtJ_P0050897 Olfr1426 protein_coding protein_coding MGP_NODShiLtJ_T0051681.1 MGP_NODShiLtJ_G0025036.1 mouse_genomes_project 19 48659020 48671687 - MGP_NODShiLtJ_P0051681 Pitx3 protein_coding protein_coding MGP_NODShiLtJ_T0051682.1 MGP_NODShiLtJ_G0025036.1 mouse_genomes_project 19 48659830 48660625 - Pitx3 protein_coding retained_intron MGP_NODShiLtJ_T0051683.1 MGP_NODShiLtJ_G0025036.1 mouse_genomes_project 19 48660367 48664337 - MGP_NODShiLtJ_P0051683 Pitx3 protein_coding protein_coding MGP_NODShiLtJ_T0051484.1 MGP_NODShiLtJ_G0024971.1 mouse_genomes_project 19 44127130 44133809 + Hoga1 protein_coding processed_transcript MGP_NODShiLtJ_T0051485.1 MGP_NODShiLtJ_G0024971.1 mouse_genomes_project 19 44127312 44152502 + MGP_NODShiLtJ_P0051485 Hoga1 protein_coding protein_coding MGP_NODShiLtJ_T0051486.1 MGP_NODShiLtJ_G0024971.1 mouse_genomes_project 19 44127371 44141689 + Hoga1 protein_coding retained_intron MGP_NODShiLtJ_T0051487.1 MGP_NODShiLtJ_G0024971.1 mouse_genomes_project 19 44127438 44152477 + MGP_NODShiLtJ_P0051487 Hoga1 protein_coding protein_coding MGP_NODShiLtJ_T0100321.1 MGP_NODShiLtJ_G0038715.1 mouse_genomes_project 19 9778216 9778350 - Gm22272 snoRNA snoRNA MGP_NODShiLtJ_T0007063.1 MGP_NODShiLtJ_G0005788.1 mouse_genomes_project 19 64481618 64483346 + Gm28351 lincRNA lincRNA MGP_NODShiLtJ_T0098294.1 MGP_NODShiLtJ_G0036700.1 mouse_genomes_project 19 59702865 59708054 + Ppnr sense_intronic sense_intronic MGP_NODShiLtJ_T0051884.1 MGP_NODShiLtJ_G0025103.1 mouse_genomes_project 19 60451200 60503780 + MGP_NODShiLtJ_P0051884 Nhlrc2 protein_coding protein_coding MGP_NODShiLtJ_T0051330.1 MGP_NODShiLtJ_G0024917.1 mouse_genomes_project 19 39302295 39310109 + MGP_NODShiLtJ_P0051330 Cyp26c1 protein_coding protein_coding MGP_NODShiLtJ_T0050100.1 MGP_NODShiLtJ_G0024485.1 mouse_genomes_project 19 1076612 1079876 + MGP_NODShiLtJ_P0050100 Ppp1ca protein_coding protein_coding MGP_NODShiLtJ_T0051337.1 MGP_NODShiLtJ_G0024921.1 mouse_genomes_project 19 39739248 39760934 + MGP_NODShiLtJ_P0051337 Ffar4 protein_coding protein_coding MGP_NODShiLtJ_T0050839.1 MGP_NODShiLtJ_G0024705.1 mouse_genomes_project 19 9041157 9055573 - MGP_NODShiLtJ_P0050839 Ms4a7 protein_coding protein_coding MGP_NODShiLtJ_T0050840.1 MGP_NODShiLtJ_G0024705.1 mouse_genomes_project 19 9041157 9057022 - MGP_NODShiLtJ_P0050840 Ms4a7 protein_coding protein_coding MGP_NODShiLtJ_T0050841.1 MGP_NODShiLtJ_G0024705.1 mouse_genomes_project 19 9041515 9056951 - MGP_NODShiLtJ_P0050841 Ms4a7 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050842.1 MGP_NODShiLtJ_G0024705.1 mouse_genomes_project 19 9041524 9056994 - MGP_NODShiLtJ_P0050842 Ms4a7 protein_coding protein_coding MGP_NODShiLtJ_T0050843.1 MGP_NODShiLtJ_G0024705.1 mouse_genomes_project 19 9041527 9045182 - MGP_NODShiLtJ_P0050843 Ms4a7 protein_coding protein_coding MGP_NODShiLtJ_T0050844.1 MGP_NODShiLtJ_G0024705.1 mouse_genomes_project 19 9041623 9057024 - Ms4a7 protein_coding retained_intron MGP_NODShiLtJ_T0050127.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1214228 1304539 - MGP_NODShiLtJ_P0050127 Kdm2a protein_coding protein_coding MGP_NODShiLtJ_T0050128.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1215978 1302094 - MGP_NODShiLtJ_P0050128 Kdm2a protein_coding protein_coding MGP_NODShiLtJ_T0050129.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1220551 1224607 - MGP_NODShiLtJ_P0050129 Kdm2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050130.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1221474 1224862 - Kdm2a protein_coding retained_intron MGP_NODShiLtJ_T0050131.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1226964 1237017 - MGP_NODShiLtJ_P0050131 Kdm2a protein_coding protein_coding MGP_NODShiLtJ_T0050132.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1231248 1236935 - MGP_NODShiLtJ_P0050132 Kdm2a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050133.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1244596 1302097 - MGP_NODShiLtJ_P0050133 Kdm2a protein_coding protein_coding MGP_NODShiLtJ_T0050134.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1251195 1302093 - Kdm2a protein_coding retained_intron MGP_NODShiLtJ_T0050135.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1253185 1266250 - MGP_NODShiLtJ_P0050135 Kdm2a protein_coding protein_coding MGP_NODShiLtJ_T0050136.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1253599 1302085 - Kdm2a protein_coding retained_intron MGP_NODShiLtJ_T0050137.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1292714 1302094 - MGP_NODShiLtJ_P0050137 Kdm2a protein_coding protein_coding MGP_NODShiLtJ_T0050138.1 MGP_NODShiLtJ_G0024492.1 mouse_genomes_project 19 1296230 1302112 - Kdm2a protein_coding retained_intron MGP_NODShiLtJ_T0051584.1 MGP_NODShiLtJ_G0025006.1 mouse_genomes_project 19 46780078 46802520 + MGP_NODShiLtJ_P0051584 Wnt8b protein_coding protein_coding MGP_NODShiLtJ_T0051598.1 MGP_NODShiLtJ_G0025010.1 mouse_genomes_project 19 46855635 46856740 + Hif1an protein_coding retained_intron MGP_NODShiLtJ_T0051599.1 MGP_NODShiLtJ_G0025010.1 mouse_genomes_project 19 46855635 46869047 + MGP_NODShiLtJ_P0051599 Hif1an protein_coding protein_coding MGP_NODShiLtJ_T0051457.1 MGP_NODShiLtJ_G0024964.1 mouse_genomes_project 19 43920112 43954982 - MGP_NODShiLtJ_P0051457 Rrp12 protein_coding protein_coding MGP_NODShiLtJ_T0050630.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6118377 6133125 + MGP_NODShiLtJ_P0050630 Stx5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050631.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6118434 6119635 + Stx5a protein_coding retained_intron MGP_NODShiLtJ_T0050632.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6118452 6133141 + MGP_NODShiLtJ_P0050632 Stx5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050633.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6118453 6133181 + MGP_NODShiLtJ_P0050633 Stx5a protein_coding protein_coding MGP_NODShiLtJ_T0050634.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6118476 6121491 + Stx5a protein_coding retained_intron MGP_NODShiLtJ_T0050635.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6118633 6119825 + MGP_NODShiLtJ_P0050635 Stx5a protein_coding protein_coding MGP_NODShiLtJ_T0050636.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6118771 6126737 + MGP_NODShiLtJ_P0050636 Stx5a protein_coding protein_coding MGP_NODShiLtJ_T0050637.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6118852 6133181 + MGP_NODShiLtJ_P0050637 Stx5a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050638.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6119108 6125853 + Stx5a protein_coding retained_intron MGP_NODShiLtJ_T0050639.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6119237 6132607 + MGP_NODShiLtJ_P0050639 Stx5a protein_coding protein_coding MGP_NODShiLtJ_T0050640.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6119824 6126084 + Stx5a protein_coding retained_intron MGP_NODShiLtJ_T0050641.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6125467 6132597 + Stx5a protein_coding retained_intron MGP_NODShiLtJ_T0050642.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6125482 6126678 + Stx5a protein_coding retained_intron MGP_NODShiLtJ_T0050643.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6125497 6132523 + Stx5a protein_coding retained_intron MGP_NODShiLtJ_T0050644.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6125554 6126343 + Stx5a protein_coding retained_intron MGP_NODShiLtJ_T0050645.1 MGP_NODShiLtJ_G0024635.1 mouse_genomes_project 19 6126363 6127059 + MGP_NODShiLtJ_P0050645 Stx5a protein_coding protein_coding MGP_NODShiLtJ_T0051976.1 MGP_NODShiLtJ_G0025134.1 mouse_genomes_project 19 65153773 65184661 - MGP_NODShiLtJ_P0051976 Sfxn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051977.1 MGP_NODShiLtJ_G0025134.1 mouse_genomes_project 19 65156610 65184713 - MGP_NODShiLtJ_P0051977 Sfxn4 protein_coding protein_coding MGP_NODShiLtJ_T0051978.1 MGP_NODShiLtJ_G0025134.1 mouse_genomes_project 19 65156620 65184658 - MGP_NODShiLtJ_P0051978 Sfxn4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050056.1 MGP_NODShiLtJ_G0024475.1 mouse_genomes_project 19 975441 977060 + Cdk2ap2 protein_coding retained_intron MGP_NODShiLtJ_T0050057.1 MGP_NODShiLtJ_G0024475.1 mouse_genomes_project 19 975441 976506 + MGP_NODShiLtJ_P0050057 Cdk2ap2 protein_coding protein_coding MGP_NODShiLtJ_T0050058.1 MGP_NODShiLtJ_G0024475.1 mouse_genomes_project 19 975442 977051 + MGP_NODShiLtJ_P0050058 Cdk2ap2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050059.1 MGP_NODShiLtJ_G0024475.1 mouse_genomes_project 19 975466 977058 + MGP_NODShiLtJ_P0050059 Cdk2ap2 protein_coding protein_coding MGP_NODShiLtJ_T0051371.1 MGP_NODShiLtJ_G0024933.1 mouse_genomes_project 19 40875338 40975227 + MGP_NODShiLtJ_P0051371 Cyp2c66 protein_coding protein_coding MGP_NODShiLtJ_T0051372.1 MGP_NODShiLtJ_G0024933.1 mouse_genomes_project 19 40875350 40975546 + MGP_NODShiLtJ_P0051372 Cyp2c66 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010201.1 MGP_NODShiLtJ_G0008334.1 mouse_genomes_project 19 16769584 16769677 - Gm23063 miRNA miRNA MGP_NODShiLtJ_T0099075.1 MGP_NODShiLtJ_G0037469.1 mouse_genomes_project 19 37806968 37807074 - Gm23170 snRNA snRNA MGP_NODShiLtJ_T0010204.1 MGP_NODShiLtJ_G0008337.1 mouse_genomes_project 19 29619703 29619800 + Mir101b miRNA miRNA MGP_NODShiLtJ_T0050142.1 MGP_NODShiLtJ_G0024494.1 mouse_genomes_project 19 1355112 1389504 - MGP_NODShiLtJ_P0050142 Syt12 protein_coding protein_coding MGP_NODShiLtJ_T0050143.1 MGP_NODShiLtJ_G0024494.1 mouse_genomes_project 19 1356937 1362569 - Syt12 protein_coding processed_transcript MGP_NODShiLtJ_T0050144.1 MGP_NODShiLtJ_G0024494.1 mouse_genomes_project 19 1367749 1389187 - MGP_NODShiLtJ_P0050144 Syt12 protein_coding protein_coding MGP_NODShiLtJ_T0050145.1 MGP_NODShiLtJ_G0024494.1 mouse_genomes_project 19 1377013 1389217 - Syt12 protein_coding retained_intron MGP_NODShiLtJ_T0050029.1 MGP_NODShiLtJ_G0024467.1 mouse_genomes_project 19 849479 852923 + MGP_NODShiLtJ_P0050029 Acy3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050646.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6135622 6150036 + MGP_NODShiLtJ_P0050646 Nxf1 protein_coding protein_coding MGP_NODShiLtJ_T0050647.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6135656 6153198 + MGP_NODShiLtJ_P0050647 Nxf1 protein_coding protein_coding MGP_NODShiLtJ_T0050648.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6135668 6146727 + Nxf1 protein_coding processed_transcript MGP_NODShiLtJ_T0050649.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6135699 6144405 + MGP_NODShiLtJ_P0050649 Nxf1 protein_coding protein_coding MGP_NODShiLtJ_T0050650.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6135699 6142853 + MGP_NODShiLtJ_P0050650 Nxf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050651.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6144047 6146510 + MGP_NODShiLtJ_P0050651 Nxf1 protein_coding protein_coding MGP_NODShiLtJ_T0050652.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6145660 6152363 + MGP_NODShiLtJ_P0050652 Nxf1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050653.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6145790 6148281 + Nxf1 protein_coding retained_intron MGP_NODShiLtJ_T0050654.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6146124 6147001 + Nxf1 protein_coding retained_intron MGP_NODShiLtJ_T0050655.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6147748 6149963 + MGP_NODShiLtJ_P0050655 Nxf1 protein_coding protein_coding MGP_NODShiLtJ_T0050656.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6149205 6150035 + Nxf1 protein_coding processed_transcript MGP_NODShiLtJ_T0050657.1 MGP_NODShiLtJ_G0024636.1 mouse_genomes_project 19 6149249 6149976 + Nxf1 protein_coding retained_intron MGP_NODShiLtJ_T0051069.1 MGP_NODShiLtJ_G0024828.1 mouse_genomes_project 19 24698823 24894312 - MGP_NODShiLtJ_P0051069 Pgm5 protein_coding protein_coding MGP_NODShiLtJ_T0051070.1 MGP_NODShiLtJ_G0024828.1 mouse_genomes_project 19 24700358 24782587 - Pgm5 protein_coding processed_transcript MGP_NODShiLtJ_T0051071.1 MGP_NODShiLtJ_G0024828.1 mouse_genomes_project 19 24835700 24894144 - Pgm5 protein_coding retained_intron MGP_NODShiLtJ_T0051072.1 MGP_NODShiLtJ_G0024828.1 mouse_genomes_project 19 24835801 24894109 - Pgm5 protein_coding retained_intron MGP_NODShiLtJ_T0050562.1 MGP_NODShiLtJ_G0024616.1 mouse_genomes_project 19 4397594 4413765 - MGP_NODShiLtJ_P0050562 Naa40 protein_coding protein_coding MGP_NODShiLtJ_T0051144.1 MGP_NODShiLtJ_G0024846.1 mouse_genomes_project 19 29438371 29470485 + MGP_NODShiLtJ_P0051144 Cdc37l1 protein_coding protein_coding MGP_NODShiLtJ_T0051145.1 MGP_NODShiLtJ_G0024846.1 mouse_genomes_project 19 29438415 29465718 + MGP_NODShiLtJ_P0051145 Cdc37l1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050924.1 MGP_NODShiLtJ_G0024747.1 mouse_genomes_project 19 10584414 10613307 + MGP_NODShiLtJ_P0050924 Keg1 protein_coding protein_coding MGP_NODShiLtJ_T0050925.1 MGP_NODShiLtJ_G0024747.1 mouse_genomes_project 19 10584415 10609444 + Keg1 protein_coding processed_transcript MGP_NODShiLtJ_T0050926.1 MGP_NODShiLtJ_G0024747.1 mouse_genomes_project 19 10584421 10611961 + Keg1 protein_coding retained_intron MGP_NODShiLtJ_T0050927.1 MGP_NODShiLtJ_G0024747.1 mouse_genomes_project 19 10584421 10612412 + MGP_NODShiLtJ_P0050927 Keg1 protein_coding protein_coding MGP_NODShiLtJ_T0050928.1 MGP_NODShiLtJ_G0024747.1 mouse_genomes_project 19 10584432 10608228 + Keg1 protein_coding retained_intron MGP_NODShiLtJ_T0050929.1 MGP_NODShiLtJ_G0024747.1 mouse_genomes_project 19 10584442 10608150 + Keg1 protein_coding retained_intron MGP_NODShiLtJ_T0050930.1 MGP_NODShiLtJ_G0024747.1 mouse_genomes_project 19 10584442 10612522 + MGP_NODShiLtJ_P0050930 Keg1 protein_coding protein_coding MGP_NODShiLtJ_T0051968.1 MGP_NODShiLtJ_G0025132.1 mouse_genomes_project 19 65075560 65105201 - MGP_NODShiLtJ_P0051968 Eif3a protein_coding protein_coding MGP_NODShiLtJ_T0050217.1 MGP_NODShiLtJ_G0024525.1 mouse_genomes_project 19 2082659 2234682 - MGP_NODShiLtJ_P0050217 Pacs1 protein_coding protein_coding MGP_NODShiLtJ_T0050872.1 MGP_NODShiLtJ_G0024714.1 mouse_genomes_project 19 9405860 9413962 - MGP_NODShiLtJ_P0050872 Ms4a2 protein_coding protein_coding MGP_NODShiLtJ_T0050873.1 MGP_NODShiLtJ_G0024714.1 mouse_genomes_project 19 9407294 9413997 - MGP_NODShiLtJ_P0050873 Ms4a2 protein_coding protein_coding MGP_NODShiLtJ_T0050874.1 MGP_NODShiLtJ_G0024714.1 mouse_genomes_project 19 9407530 9413921 - MGP_NODShiLtJ_P0050874 Ms4a2 protein_coding protein_coding MGP_NODShiLtJ_T0050875.1 MGP_NODShiLtJ_G0024714.1 mouse_genomes_project 19 9407810 9413937 - MGP_NODShiLtJ_P0050875 Ms4a2 protein_coding protein_coding MGP_NODShiLtJ_T0050876.1 MGP_NODShiLtJ_G0024714.1 mouse_genomes_project 19 9409264 9413966 - Ms4a2 protein_coding processed_transcript MGP_NODShiLtJ_T0007048.1 MGP_NODShiLtJ_G0005778.1 mouse_genomes_project 19 53767676 53883849 + Gm26629 lincRNA lincRNA MGP_NODShiLtJ_T0050986.1 MGP_NODShiLtJ_G0024792.1 mouse_genomes_project 19 15314015 15556144 - MGP_NODShiLtJ_P0050986 Vps13a protein_coding protein_coding MGP_NODShiLtJ_T0050987.1 MGP_NODShiLtJ_G0024792.1 mouse_genomes_project 19 15347184 15556091 - MGP_NODShiLtJ_P0050987 Vps13a protein_coding unknown_likely_coding MGP_NODShiLtJ_T0099065.1 MGP_NODShiLtJ_G0037459.1 mouse_genomes_project 19 11394120 11394227 - Gm22443 snRNA snRNA MGP_NODShiLtJ_T0050869.1 MGP_NODShiLtJ_G0024713.1 mouse_genomes_project 19 9382675 9395143 - MGP_NODShiLtJ_P0050869 Ms4a6d protein_coding protein_coding MGP_NODShiLtJ_T0050870.1 MGP_NODShiLtJ_G0024713.1 mouse_genomes_project 19 9383054 9390072 - Ms4a6d protein_coding processed_transcript MGP_NODShiLtJ_T0050871.1 MGP_NODShiLtJ_G0024713.1 mouse_genomes_project 19 9384041 9390166 - Ms4a6d protein_coding retained_intron MGP_NODShiLtJ_T0003817.1 MGP_NODShiLtJ_G0003411.1 mouse_genomes_project 19 47138637 47146052 - 1700039E22Rik antisense antisense MGP_NODShiLtJ_T0051527.1 MGP_NODShiLtJ_G0024985.1 mouse_genomes_project 19 44908788 45572487 - MGP_NODShiLtJ_P0051527 Hpse2 protein_coding protein_coding MGP_NODShiLtJ_T0049975.1 MGP_NODShiLtJ_G0024458.1 mouse_genomes_project 19 510103 519652 + MGP_NODShiLtJ_P0049975 1810055G02Rik protein_coding protein_coding MGP_NODShiLtJ_T0051377.1 MGP_NODShiLtJ_G0024936.1 mouse_genomes_project 19 41291301 41346267 + MGP_NODShiLtJ_P0051377 Cyp2c39 protein_coding protein_coding MGP_NODShiLtJ_T0050945.1 MGP_NODShiLtJ_G0024760.1 mouse_genomes_project 19 11038827 11039751 + MGP_NODShiLtJ_P0050945 Olfr1454 protein_coding protein_coding MGP_NODShiLtJ_T0050892.1 MGP_NODShiLtJ_G0024722.1 mouse_genomes_project 19 9705340 9706500 - MGP_NODShiLtJ_P0050892 Olfr1419 protein_coding protein_coding MGP_NODShiLtJ_T0050267.1 MGP_NODShiLtJ_G0024542.1 mouse_genomes_project 19 2485858 2501033 - MGP_NODShiLtJ_P0050267 Snx32 protein_coding protein_coding MGP_NODShiLtJ_T0013270.1 MGP_NODShiLtJ_G0011378.1 mouse_genomes_project 19 28171145 28171585 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050893.1 MGP_NODShiLtJ_G0024723.1 mouse_genomes_project 19 9736547 9737599 + MGP_NODShiLtJ_P0050893 Olfr1420 protein_coding protein_coding MGP_NODShiLtJ_T0051942.1 MGP_NODShiLtJ_G0025117.1 mouse_genomes_project 19 62884322 62903163 + MGP_NODShiLtJ_P0051942 Pnliprp2 protein_coding protein_coding MGP_NODShiLtJ_T0050880.1 MGP_NODShiLtJ_G0024716.1 mouse_genomes_project 19 9447742 9466091 - MGP_NODShiLtJ_P0050880 Oosp2 protein_coding protein_coding MGP_NODShiLtJ_T0050881.1 MGP_NODShiLtJ_G0024716.1 mouse_genomes_project 19 9447743 9466134 - MGP_NODShiLtJ_P0050881 Oosp2 protein_coding protein_coding MGP_NODShiLtJ_T0097790.1 MGP_NODShiLtJ_G0036202.1 mouse_genomes_project 19 15555868 15556425 + pseudogene pseudogene MGP_NODShiLtJ_T0050948.1 MGP_NODShiLtJ_G0024763.1 mouse_genomes_project 19 11132218 11133319 - MGP_NODShiLtJ_P0050948 Olfr1459 protein_coding protein_coding MGP_NODShiLtJ_T0051353.1 MGP_NODShiLtJ_G0024926.1 mouse_genomes_project 19 40074754 40091065 + MGP_NODShiLtJ_P0051353 Slc35g1 protein_coding protein_coding MGP_NODShiLtJ_T0100333.1 MGP_NODShiLtJ_G0038727.1 mouse_genomes_project 19 46368868 46369014 - Gm24336 snoRNA snoRNA MGP_NODShiLtJ_T0051680.1 MGP_NODShiLtJ_G0025035.1 mouse_genomes_project 19 48655116 48658644 + MGP_NODShiLtJ_P0051680 Elovl3 protein_coding protein_coding MGP_NODShiLtJ_T0050784.1 MGP_NODShiLtJ_G0024687.1 mouse_genomes_project 19 8514184 8517817 + Slc15a3 protein_coding processed_transcript MGP_NODShiLtJ_T0050785.1 MGP_NODShiLtJ_G0024687.1 mouse_genomes_project 19 8517001 8533536 + MGP_NODShiLtJ_P0050785 Slc15a3 protein_coding protein_coding MGP_NODShiLtJ_T0050786.1 MGP_NODShiLtJ_G0024687.1 mouse_genomes_project 19 8517007 8517941 + Slc15a3 protein_coding processed_transcript MGP_NODShiLtJ_T0050787.1 MGP_NODShiLtJ_G0024687.1 mouse_genomes_project 19 8517364 8534983 + Slc15a3 protein_coding retained_intron MGP_NODShiLtJ_T0050196.1 MGP_NODShiLtJ_G0024517.1 mouse_genomes_project 19 1987432 1996799 + MGP_NODShiLtJ_P0050196 Brms1 protein_coding protein_coding MGP_NODShiLtJ_T0050845.1 MGP_NODShiLtJ_G0024706.1 mouse_genomes_project 19 9099078 9118268 + MGP_NODShiLtJ_P0050845 Ms4a4a protein_coding protein_coding MGP_NODShiLtJ_T0050071.1 MGP_NODShiLtJ_G0024477.1 mouse_genomes_project 19 992483 1005675 - MGP_NODShiLtJ_P0050071 Aip protein_coding protein_coding MGP_NODShiLtJ_T0050072.1 MGP_NODShiLtJ_G0024477.1 mouse_genomes_project 19 992501 1000536 - MGP_NODShiLtJ_P0050072 Aip protein_coding protein_coding MGP_NODShiLtJ_T0050073.1 MGP_NODShiLtJ_G0024477.1 mouse_genomes_project 19 993484 1005665 - MGP_NODShiLtJ_P0050073 Aip protein_coding protein_coding MGP_NODShiLtJ_T0050074.1 MGP_NODShiLtJ_G0024477.1 mouse_genomes_project 19 996293 1003525 - Aip protein_coding processed_transcript MGP_NODShiLtJ_T0050075.1 MGP_NODShiLtJ_G0024477.1 mouse_genomes_project 19 999893 1005607 - Aip protein_coding retained_intron MGP_NODShiLtJ_T0050555.1 MGP_NODShiLtJ_G0024613.1 mouse_genomes_project 19 4258250 4271932 - MGP_NODShiLtJ_P0050555 Flrt1 protein_coding protein_coding MGP_NODShiLtJ_T0051658.1 MGP_NODShiLtJ_G0025032.1 mouse_genomes_project 19 48545323 48560114 - MGP_NODShiLtJ_P0051658 Ldb1 protein_coding protein_coding MGP_NODShiLtJ_T0051659.1 MGP_NODShiLtJ_G0025032.1 mouse_genomes_project 19 48546490 48560474 - MGP_NODShiLtJ_P0051659 Ldb1 protein_coding protein_coding MGP_NODShiLtJ_T0051660.1 MGP_NODShiLtJ_G0025032.1 mouse_genomes_project 19 48546491 48553519 - MGP_NODShiLtJ_P0051660 Ldb1 protein_coding protein_coding MGP_NODShiLtJ_T0051661.1 MGP_NODShiLtJ_G0025032.1 mouse_genomes_project 19 48546513 48560471 - MGP_NODShiLtJ_P0051661 Ldb1 protein_coding protein_coding MGP_NODShiLtJ_T0051662.1 MGP_NODShiLtJ_G0025032.1 mouse_genomes_project 19 48546586 48560470 - MGP_NODShiLtJ_P0051662 Ldb1 protein_coding protein_coding MGP_NODShiLtJ_T0051663.1 MGP_NODShiLtJ_G0025032.1 mouse_genomes_project 19 48546586 48560174 - MGP_NODShiLtJ_P0051663 Ldb1 protein_coding protein_coding MGP_NODShiLtJ_T0051664.1 MGP_NODShiLtJ_G0025032.1 mouse_genomes_project 19 48547642 48548776 - Ldb1 protein_coding retained_intron MGP_NODShiLtJ_T0051665.1 MGP_NODShiLtJ_G0025032.1 mouse_genomes_project 19 48547948 48549911 - Ldb1 protein_coding retained_intron MGP_NODShiLtJ_T0003818.1 MGP_NODShiLtJ_G0003412.1 mouse_genomes_project 19 47503878 47509094 - Tlx1os antisense antisense MGP_NODShiLtJ_T0051249.1 MGP_NODShiLtJ_G0024886.1 mouse_genomes_project 19 35179831 35204587 + MGP_NODShiLtJ_P0051249 Lipm protein_coding protein_coding MGP_NODShiLtJ_T0051731.1 MGP_NODShiLtJ_G0025051.1 mouse_genomes_project 19 49302459 49344661 + MGP_NODShiLtJ_P0051731 As3mt protein_coding protein_coding MGP_NODShiLtJ_T0051284.1 MGP_NODShiLtJ_G0024904.1 mouse_genomes_project 19 37519200 37527449 - MGP_NODShiLtJ_P0051284 Ankrd1 protein_coding protein_coding MGP_NODShiLtJ_T0051490.1 MGP_NODShiLtJ_G0024974.1 mouse_genomes_project 19 44173281 44208873 + MGP_NODShiLtJ_P0051490 Pi4k2a protein_coding protein_coding MGP_NODShiLtJ_T0050740.1 MGP_NODShiLtJ_G0024668.1 mouse_genomes_project 19 7824035 7830048 - MGP_NODShiLtJ_P0050740 Fen1 protein_coding protein_coding MGP_NODShiLtJ_T0050741.1 MGP_NODShiLtJ_G0024668.1 mouse_genomes_project 19 7824041 7829822 - MGP_NODShiLtJ_P0050741 Fen1 protein_coding protein_coding MGP_NODShiLtJ_T0050742.1 MGP_NODShiLtJ_G0024668.1 mouse_genomes_project 19 7824041 7829947 - MGP_NODShiLtJ_P0050742 Fen1 protein_coding protein_coding MGP_NODShiLtJ_T0050743.1 MGP_NODShiLtJ_G0024668.1 mouse_genomes_project 19 7824045 7829773 - MGP_NODShiLtJ_P0050743 Fen1 protein_coding protein_coding MGP_NODShiLtJ_T0017532.1 MGP_NODShiLtJ_G0015246.1 mouse_genomes_project 19 3345748 3353559 - Gm14963 processed_transcript processed_transcript MGP_NODShiLtJ_T0101777.1 MGP_NODShiLtJ_G0039945.1 mouse_genomes_project 19 6789190 6793373 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0051456.1 MGP_NODShiLtJ_G0024963.1 mouse_genomes_project 19 43900423 43902578 - MGP_NODShiLtJ_P0051456 Frat2 protein_coding protein_coding MGP_NODShiLtJ_T0003810.1 MGP_NODShiLtJ_G0003407.1 mouse_genomes_project 19 39978027 39995307 - Gm42723 antisense antisense MGP_NODShiLtJ_T0003811.1 MGP_NODShiLtJ_G0003407.1 mouse_genomes_project 19 39994248 39995292 - Gm42723 antisense antisense MGP_NODShiLtJ_T0051785.1 MGP_NODShiLtJ_G0025073.1 mouse_genomes_project 19 50916604 51565979 + MGP_NODShiLtJ_P0051785 Sorcs3 protein_coding protein_coding MGP_NODShiLtJ_T0050157.1 MGP_NODShiLtJ_G0024501.1 mouse_genomes_project 19 1664904 1741593 - MGP_NODShiLtJ_P0050157 Gm21992 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050164.1 MGP_NODShiLtJ_G0024501.1 mouse_genomes_project 19 1711555 1741489 - MGP_NODShiLtJ_P0050164 Gm21992 protein_coding protein_coding MGP_NODShiLtJ_T0050165.1 MGP_NODShiLtJ_G0024501.1 mouse_genomes_project 19 1711556 1741193 - MGP_NODShiLtJ_P0050165 Gm21992 protein_coding protein_coding MGP_NODShiLtJ_T0050166.1 MGP_NODShiLtJ_G0024501.1 mouse_genomes_project 19 1713772 1741489 - MGP_NODShiLtJ_P0050166 Gm21992 protein_coding protein_coding MGP_NODShiLtJ_T0050168.1 MGP_NODShiLtJ_G0024501.1 mouse_genomes_project 19 1717566 1741584 - Gm21992 protein_coding retained_intron MGP_NODShiLtJ_T0011371.1 MGP_NODShiLtJ_G0009504.1 mouse_genomes_project 19 35368404 35368563 + Gm27818 misc_RNA misc_RNA MGP_NODShiLtJ_T0010208.1 MGP_NODShiLtJ_G0008341.1 mouse_genomes_project 19 35891166 35891270 + Gm27476 miRNA miRNA MGP_NODShiLtJ_T0051927.1 MGP_NODShiLtJ_G0025111.1 mouse_genomes_project 19 61431180 61471294 + MGP_NODShiLtJ_P0051927 Trub1 protein_coding protein_coding MGP_NODShiLtJ_T0051928.1 MGP_NODShiLtJ_G0025111.1 mouse_genomes_project 19 61431180 61469199 + MGP_NODShiLtJ_P0051928 Trub1 protein_coding protein_coding MGP_NODShiLtJ_T0051059.1 MGP_NODShiLtJ_G0024822.1 mouse_genomes_project 19 23909435 23976433 - MGP_NODShiLtJ_P0051059 Fam189a2 protein_coding protein_coding MGP_NODShiLtJ_T0051967.1 MGP_NODShiLtJ_G0025131.1 mouse_genomes_project 19 65070406 65074355 + MGP_NODShiLtJ_P0051967 Nanos1 protein_coding protein_coding MGP_NODShiLtJ_T0017531.1 MGP_NODShiLtJ_G0015245.1 mouse_genomes_project 19 2831143 2832131 + Gm20417 processed_transcript processed_transcript MGP_NODShiLtJ_T0050199.1 MGP_NODShiLtJ_G0024519.1 mouse_genomes_project 19 2014913 2017473 + MGP_NODShiLtJ_P0050199 Cd248 protein_coding protein_coding MGP_NODShiLtJ_T0050468.1 MGP_NODShiLtJ_G0024590.1 mouse_genomes_project 19 3484631 3500254 + MGP_NODShiLtJ_P0050468 Pygm protein_coding protein_coding MGP_NODShiLtJ_T0050469.1 MGP_NODShiLtJ_G0024590.1 mouse_genomes_project 19 3484647 3500243 + MGP_NODShiLtJ_P0050469 Pygm protein_coding protein_coding MGP_NODShiLtJ_T0050470.1 MGP_NODShiLtJ_G0024590.1 mouse_genomes_project 19 3492949 3494423 + Pygm protein_coding retained_intron MGP_NODShiLtJ_T0050471.1 MGP_NODShiLtJ_G0024590.1 mouse_genomes_project 19 3499289 3500086 + Pygm protein_coding retained_intron MGP_NODShiLtJ_T0051745.1 MGP_NODShiLtJ_G0025060.1 mouse_genomes_project 19 49764343 49769969 - MGP_NODShiLtJ_P0051745 Calhm1 protein_coding protein_coding MGP_NODShiLtJ_T0051926.1 MGP_NODShiLtJ_G0025110.1 mouse_genomes_project 19 61320402 61350682 + MGP_NODShiLtJ_P0051926 Fam160b1 protein_coding protein_coding MGP_NODShiLtJ_T0099072.1 MGP_NODShiLtJ_G0037466.1 mouse_genomes_project 19 26427396 26427521 - Gm25176 snRNA snRNA MGP_NODShiLtJ_T0050542.1 MGP_NODShiLtJ_G0024605.1 mouse_genomes_project 19 4124498 4127219 - MGP_NODShiLtJ_P0050542 Fkbp2 protein_coding protein_coding MGP_NODShiLtJ_T0050543.1 MGP_NODShiLtJ_G0024605.1 mouse_genomes_project 19 4124498 4127198 - MGP_NODShiLtJ_P0050543 Fkbp2 protein_coding protein_coding MGP_NODShiLtJ_T0050677.1 MGP_NODShiLtJ_G0024641.1 mouse_genomes_project 19 6207225 6222004 + MGP_NODShiLtJ_P0050677 Hnrnpul2 protein_coding protein_coding MGP_NODShiLtJ_T0051743.1 MGP_NODShiLtJ_G0025059.1 mouse_genomes_project 19 49728745 49761609 - MGP_NODShiLtJ_P0051743 Calhm2 protein_coding protein_coding MGP_NODShiLtJ_T0051744.1 MGP_NODShiLtJ_G0025059.1 mouse_genomes_project 19 49755180 49761609 - MGP_NODShiLtJ_P0051744 Calhm2 protein_coding protein_coding MGP_NODShiLtJ_T0051811.1 MGP_NODShiLtJ_G0025083.1 mouse_genomes_project 19 56992556 57003310 - MGP_NODShiLtJ_P0051811 Smndc1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0007032.1 MGP_NODShiLtJ_G0005766.1 mouse_genomes_project 19 38721931 38746765 + A330032B11Rik lincRNA lincRNA MGP_NODShiLtJ_T0051840.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59595625 59800463 + MGP_NODShiLtJ_P0051840 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051841.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59595625 59800463 + MGP_NODShiLtJ_P0051841 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051842.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59595635 59800038 + MGP_NODShiLtJ_P0051842 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051843.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59595635 59800061 + MGP_NODShiLtJ_P0051843 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051844.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59595699 59798357 + MGP_NODShiLtJ_P0051844 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051845.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59595699 59790881 + MGP_NODShiLtJ_P0051845 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051846.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59595870 59797851 + MGP_NODShiLtJ_P0051846 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051847.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59596054 59778744 + MGP_NODShiLtJ_P0051847 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051848.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59596055 59778743 + MGP_NODShiLtJ_P0051848 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051849.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59596055 59778744 + MGP_NODShiLtJ_P0051849 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051850.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59596091 59776570 + Tcf7l2 protein_coding retained_intron MGP_NODShiLtJ_T0051851.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59596091 59790878 + MGP_NODShiLtJ_P0051851 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051852.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59596140 59800463 + MGP_NODShiLtJ_P0051852 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051853.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59596172 59800040 + MGP_NODShiLtJ_P0051853 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051854.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59596276 59797851 + MGP_NODShiLtJ_P0051854 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051855.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59759361 59785264 + Tcf7l2 protein_coding processed_transcript MGP_NODShiLtJ_T0051856.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59760543 59784612 + MGP_NODShiLtJ_P0051856 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051857.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59761519 59800038 + MGP_NODShiLtJ_P0051857 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0051858.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59761671 59778658 + Tcf7l2 protein_coding processed_transcript MGP_NODShiLtJ_T0051859.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59764315 59784687 + Tcf7l2 protein_coding processed_transcript MGP_NODShiLtJ_T0051860.1 MGP_NODShiLtJ_G0025097.1 mouse_genomes_project 19 59764559 59785250 + MGP_NODShiLtJ_P0051860 Tcf7l2 protein_coding protein_coding MGP_NODShiLtJ_T0050224.1 MGP_NODShiLtJ_G0024531.1 mouse_genomes_project 19 2341503 2346209 + MGP_NODShiLtJ_P0050224 Eif1ad protein_coding protein_coding MGP_NODShiLtJ_T0050007.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 739465 746406 - Tcirg1 protein_coding retained_intron MGP_NODShiLtJ_T0050008.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 739465 748506 - MGP_NODShiLtJ_P0050008 Tcirg1 protein_coding protein_coding MGP_NODShiLtJ_T0050009.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 739465 750409 - MGP_NODShiLtJ_P0050009 Tcirg1 protein_coding protein_coding MGP_NODShiLtJ_T0050010.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 739465 750267 - MGP_NODShiLtJ_P0050010 Tcirg1 protein_coding protein_coding MGP_NODShiLtJ_T0050011.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 739465 750388 - MGP_NODShiLtJ_P0050011 Tcirg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050012.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 739685 745357 - MGP_NODShiLtJ_P0050012 Tcirg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050013.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 739815 740646 - Tcirg1 protein_coding retained_intron MGP_NODShiLtJ_T0050014.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 740486 741247 - Tcirg1 protein_coding retained_intron MGP_NODShiLtJ_T0050015.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 741622 742201 - Tcirg1 protein_coding retained_intron MGP_NODShiLtJ_T0050016.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 742083 746689 - MGP_NODShiLtJ_P0050016 Tcirg1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050017.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 745576 746580 - Tcirg1 protein_coding retained_intron MGP_NODShiLtJ_T0050018.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 745827 750316 - Tcirg1 protein_coding retained_intron MGP_NODShiLtJ_T0050019.1 MGP_NODShiLtJ_G0024461.1 mouse_genomes_project 19 746027 747755 - Tcirg1 protein_coding retained_intron MGP_NODShiLtJ_T0050192.1 MGP_NODShiLtJ_G0024513.1 mouse_genomes_project 19 1905525 1910219 + MGP_NODShiLtJ_P0050192 Mrpl11 protein_coding protein_coding MGP_NODShiLtJ_T0050963.1 MGP_NODShiLtJ_G0024778.1 mouse_genomes_project 19 12082655 12083722 + MGP_NODShiLtJ_P0050963 Olfr1496 protein_coding protein_coding MGP_NODShiLtJ_T0050716.1 MGP_NODShiLtJ_G0024655.1 mouse_genomes_project 19 6357143 6370434 + MGP_NODShiLtJ_P0050716 Tut1 protein_coding protein_coding MGP_NODShiLtJ_T0050773.1 MGP_NODShiLtJ_G0024681.1 mouse_genomes_project 19 8262534 8287740 + MGP_NODShiLtJ_P0050773 Ddb1 protein_coding protein_coding MGP_NODShiLtJ_T0050088.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1038424 1044845 - MGP_NODShiLtJ_P0050088 Rps6kb2 protein_coding protein_coding MGP_NODShiLtJ_T0050089.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1038430 1044896 - MGP_NODShiLtJ_P0050089 Rps6kb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050090.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1038433 1044916 - Rps6kb2 protein_coding retained_intron MGP_NODShiLtJ_T0050091.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1038433 1039791 - Rps6kb2 protein_coding retained_intron MGP_NODShiLtJ_T0050092.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1038433 1044900 - MGP_NODShiLtJ_P0050092 Rps6kb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050093.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1038624 1043930 - Rps6kb2 protein_coding processed_transcript MGP_NODShiLtJ_T0050094.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1038624 1044885 - MGP_NODShiLtJ_P0050094 Rps6kb2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050095.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1043859 1044900 - Rps6kb2 protein_coding processed_transcript MGP_NODShiLtJ_T0050096.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1044116 1044930 - Rps6kb2 protein_coding retained_intron MGP_NODShiLtJ_T0050097.1 MGP_NODShiLtJ_G0024482.1 mouse_genomes_project 19 1044414 1044954 - Rps6kb2 protein_coding processed_transcript MGP_NODShiLtJ_T0050048.1 MGP_NODShiLtJ_G0024472.1 mouse_genomes_project 19 907241 909662 - MGP_NODShiLtJ_P0050048 Gstp2 protein_coding protein_coding MGP_NODShiLtJ_T0013266.1 MGP_NODShiLtJ_G0011374.1 mouse_genomes_project 19 20129773 20130457 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0003794.1 MGP_NODShiLtJ_G0003396.1 mouse_genomes_project 19 3454278 3462443 - Gm14966 antisense antisense MGP_NODShiLtJ_T0003795.1 MGP_NODShiLtJ_G0003396.1 mouse_genomes_project 19 3454354 3462667 - Gm14966 antisense antisense MGP_NODShiLtJ_T0013267.1 MGP_NODShiLtJ_G0011375.1 mouse_genomes_project 19 23572871 23573864 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050237.1 MGP_NODShiLtJ_G0024537.1 mouse_genomes_project 19 2445686 2446295 - MGP_NODShiLtJ_P0050237 Ccdc85b protein_coding protein_coding MGP_NODShiLtJ_T0051706.1 MGP_NODShiLtJ_G0025041.1 mouse_genomes_project 19 48859885 48868749 - MGP_NODShiLtJ_P0051706 Cuedc2 protein_coding protein_coding MGP_NODShiLtJ_T0051707.1 MGP_NODShiLtJ_G0025041.1 mouse_genomes_project 19 48859885 48868749 - MGP_NODShiLtJ_P0051707 Cuedc2 protein_coding protein_coding MGP_NODShiLtJ_T0010188.1 MGP_NODShiLtJ_G0008321.1 mouse_genomes_project 19 3341596 3341682 + Mir194-2 miRNA miRNA MGP_NODShiLtJ_T0050614.1 MGP_NODShiLtJ_G0024629.1 mouse_genomes_project 19 5950985 5971522 + MGP_NODShiLtJ_P0050614 Slc22a8 protein_coding protein_coding MGP_NODShiLtJ_T0050615.1 MGP_NODShiLtJ_G0024629.1 mouse_genomes_project 19 5950985 5971522 + MGP_NODShiLtJ_P0050615 Slc22a8 protein_coding protein_coding MGP_NODShiLtJ_T0051719.1 MGP_NODShiLtJ_G0025046.1 mouse_genomes_project 19 49090513 49146151 - MGP_NODShiLtJ_P0051719 Arl3 protein_coding protein_coding MGP_NODShiLtJ_T0051767.1 MGP_NODShiLtJ_G0025067.1 mouse_genomes_project 19 50311949 50359925 - MGP_NODShiLtJ_P0051767 Col17a1 protein_coding protein_coding MGP_NODShiLtJ_T0051768.1 MGP_NODShiLtJ_G0025067.1 mouse_genomes_project 19 50311949 50359925 - MGP_NODShiLtJ_P0051768 Col17a1 protein_coding protein_coding MGP_NODShiLtJ_T0051769.1 MGP_NODShiLtJ_G0025067.1 mouse_genomes_project 19 50313705 50315201 - Col17a1 protein_coding processed_transcript MGP_NODShiLtJ_T0051778.1 MGP_NODShiLtJ_G0025070.1 mouse_genomes_project 19 50538471 50550038 + MGP_NODShiLtJ_P0051778 Gsto1 protein_coding protein_coding MGP_NODShiLtJ_T0051779.1 MGP_NODShiLtJ_G0025070.1 mouse_genomes_project 19 50538584 50539227 + Gsto1 protein_coding retained_intron MGP_NODShiLtJ_T0051780.1 MGP_NODShiLtJ_G0025070.1 mouse_genomes_project 19 50548280 50549815 + Gsto1 protein_coding retained_intron MGP_NODShiLtJ_T0097793.1 MGP_NODShiLtJ_G0036205.1 mouse_genomes_project 19 65297918 65298501 - pseudogene pseudogene MGP_NODShiLtJ_T0050530.1 MGP_NODShiLtJ_G0024601.1 mouse_genomes_project 19 4077882 4081321 - MGP_NODShiLtJ_P0050530 Gpr137 protein_coding protein_coding MGP_NODShiLtJ_T0050531.1 MGP_NODShiLtJ_G0024601.1 mouse_genomes_project 19 4077883 4082264 - MGP_NODShiLtJ_P0050531 Gpr137 protein_coding protein_coding MGP_NODShiLtJ_T0050532.1 MGP_NODShiLtJ_G0024601.1 mouse_genomes_project 19 4077883 4081007 - MGP_NODShiLtJ_P0050532 Gpr137 protein_coding protein_coding MGP_NODShiLtJ_T0050533.1 MGP_NODShiLtJ_G0024601.1 mouse_genomes_project 19 4077883 4081293 - MGP_NODShiLtJ_P0050533 Gpr137 protein_coding protein_coding MGP_NODShiLtJ_T0050534.1 MGP_NODShiLtJ_G0024601.1 mouse_genomes_project 19 4077883 4081007 - MGP_NODShiLtJ_P0050534 Gpr137 protein_coding protein_coding MGP_NODShiLtJ_T0017556.1 MGP_NODShiLtJ_G0015251.1 mouse_genomes_project 19 8407105 8458878 + A430093F15Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017557.1 MGP_NODShiLtJ_G0015251.1 mouse_genomes_project 19 8407109 8458869 + A430093F15Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017558.1 MGP_NODShiLtJ_G0015251.1 mouse_genomes_project 19 8407118 8458512 + A430093F15Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017559.1 MGP_NODShiLtJ_G0015251.1 mouse_genomes_project 19 8415539 8427419 + A430093F15Rik processed_transcript retained_intron MGP_NODShiLtJ_T0017560.1 MGP_NODShiLtJ_G0015251.1 mouse_genomes_project 19 8454749 8458874 + A430093F15Rik processed_transcript lincRNA MGP_NODShiLtJ_T0017561.1 MGP_NODShiLtJ_G0015251.1 mouse_genomes_project 19 8458186 8458871 + A430093F15Rik processed_transcript retained_intron MGP_NODShiLtJ_T0050608.1 MGP_NODShiLtJ_G0024626.1 mouse_genomes_project 19 4899231 4940300 - MGP_NODShiLtJ_P0050608 Slc22a19 protein_coding protein_coding MGP_NODShiLtJ_T0050609.1 MGP_NODShiLtJ_G0024626.1 mouse_genomes_project 19 4902280 4940269 - Slc22a19 protein_coding retained_intron MGP_NODShiLtJ_T0050610.1 MGP_NODShiLtJ_G0024626.1 mouse_genomes_project 19 4934357 4940300 - Slc22a19 protein_coding retained_intron MGP_NODShiLtJ_T0051488.1 MGP_NODShiLtJ_G0024972.1 mouse_genomes_project 19 44133766 44135146 + MGP_NODShiLtJ_P0051488 4933411K16Rik protein_coding protein_coding MGP_NODShiLtJ_T0050395.1 MGP_NODShiLtJ_G0024580.1 mouse_genomes_project 19 3210459 3243231 + Batf2 protein_coding processed_transcript MGP_NODShiLtJ_T0050396.1 MGP_NODShiLtJ_G0024580.1 mouse_genomes_project 19 3235196 3243234 + MGP_NODShiLtJ_P0050396 Batf2 protein_coding protein_coding MGP_NODShiLtJ_T0050397.1 MGP_NODShiLtJ_G0024580.1 mouse_genomes_project 19 3235211 3242526 + Batf2 protein_coding retained_intron MGP_NODShiLtJ_T0050398.1 MGP_NODShiLtJ_G0024580.1 mouse_genomes_project 19 3235211 3242125 + Batf2 protein_coding retained_intron MGP_NODShiLtJ_T0050399.1 MGP_NODShiLtJ_G0024580.1 mouse_genomes_project 19 3235217 3242516 + Batf2 protein_coding processed_transcript MGP_NODShiLtJ_T0050400.1 MGP_NODShiLtJ_G0024580.1 mouse_genomes_project 19 3235246 3242125 + Batf2 protein_coding retained_intron MGP_NODShiLtJ_T0051184.1 MGP_NODShiLtJ_G0024859.1 mouse_genomes_project 19 30350991 30355566 - MGP_NODShiLtJ_P0051184 Ranbp6 protein_coding protein_coding MGP_NODShiLtJ_T0051897.1 MGP_NODShiLtJ_G0025108.1 mouse_genomes_project 19 60844744 60944689 - MGP_NODShiLtJ_P0051897 Afap1l2 protein_coding protein_coding MGP_NODShiLtJ_T0051898.1 MGP_NODShiLtJ_G0025108.1 mouse_genomes_project 19 60844744 60944707 - MGP_NODShiLtJ_P0051898 Afap1l2 protein_coding protein_coding MGP_NODShiLtJ_T0051899.1 MGP_NODShiLtJ_G0025108.1 mouse_genomes_project 19 60844744 60944677 - MGP_NODShiLtJ_P0051899 Afap1l2 protein_coding protein_coding MGP_NODShiLtJ_T0051900.1 MGP_NODShiLtJ_G0025108.1 mouse_genomes_project 19 60845765 60944645 - MGP_NODShiLtJ_P0051900 Afap1l2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051901.1 MGP_NODShiLtJ_G0025108.1 mouse_genomes_project 19 60852781 60861927 - Afap1l2 protein_coding retained_intron MGP_NODShiLtJ_T0051902.1 MGP_NODShiLtJ_G0025108.1 mouse_genomes_project 19 60856913 60944707 - MGP_NODShiLtJ_P0051902 Afap1l2 protein_coding protein_coding MGP_NODShiLtJ_T0051903.1 MGP_NODShiLtJ_G0025108.1 mouse_genomes_project 19 60863429 60937531 - MGP_NODShiLtJ_P0051903 Afap1l2 protein_coding protein_coding MGP_NODShiLtJ_T0051904.1 MGP_NODShiLtJ_G0025108.1 mouse_genomes_project 19 60876845 60944687 - Afap1l2 protein_coding retained_intron MGP_NODShiLtJ_T0050403.1 MGP_NODShiLtJ_G0024582.1 mouse_genomes_project 19 3300818 3302207 + MGP_NODShiLtJ_P0050403 Gpha2 protein_coding protein_coding MGP_NODShiLtJ_T0050404.1 MGP_NODShiLtJ_G0024582.1 mouse_genomes_project 19 3300826 3302207 + MGP_NODShiLtJ_P0050404 Gpha2 protein_coding protein_coding MGP_NODShiLtJ_T0013250.1 MGP_NODShiLtJ_G0011358.1 mouse_genomes_project 19 3101462 3101594 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0051708.1 MGP_NODShiLtJ_G0025042.1 mouse_genomes_project 19 48890176 48911288 + MGP_NODShiLtJ_P0051708 Mfsd13a protein_coding protein_coding MGP_NODShiLtJ_T0051709.1 MGP_NODShiLtJ_G0025042.1 mouse_genomes_project 19 48890254 48911278 + MGP_NODShiLtJ_P0051709 Mfsd13a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051710.1 MGP_NODShiLtJ_G0025042.1 mouse_genomes_project 19 48902771 48911278 + Mfsd13a protein_coding retained_intron MGP_NODShiLtJ_T0051980.1 MGP_NODShiLtJ_G0025136.1 mouse_genomes_project 19 65217516 65427327 + MGP_NODShiLtJ_P0051980 Grk5 protein_coding protein_coding MGP_NODShiLtJ_T0050585.1 MGP_NODShiLtJ_G0024619.1 mouse_genomes_project 19 4547341 4575284 - MGP_NODShiLtJ_P0050585 AI846148 protein_coding protein_coding MGP_NODShiLtJ_T0051164.1 MGP_NODShiLtJ_G0024855.1 mouse_genomes_project 19 30049917 30140709 + MGP_NODShiLtJ_P0051164 Ric1 protein_coding protein_coding MGP_NODShiLtJ_T0051165.1 MGP_NODShiLtJ_G0024855.1 mouse_genomes_project 19 30049970 30096988 + MGP_NODShiLtJ_P0051165 Ric1 protein_coding protein_coding MGP_NODShiLtJ_T0051166.1 MGP_NODShiLtJ_G0024855.1 mouse_genomes_project 19 30050017 30114837 + Ric1 protein_coding retained_intron MGP_NODShiLtJ_T0051167.1 MGP_NODShiLtJ_G0024855.1 mouse_genomes_project 19 30062684 30138055 + MGP_NODShiLtJ_P0051167 Ric1 protein_coding protein_coding MGP_NODShiLtJ_T0051168.1 MGP_NODShiLtJ_G0024855.1 mouse_genomes_project 19 30129547 30139040 + MGP_NODShiLtJ_P0051168 Ric1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051169.1 MGP_NODShiLtJ_G0024855.1 mouse_genomes_project 19 30131279 30133752 + Ric1 protein_coding retained_intron MGP_NODShiLtJ_T0051170.1 MGP_NODShiLtJ_G0024855.1 mouse_genomes_project 19 30131864 30139751 + MGP_NODShiLtJ_P0051170 Ric1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051340.1 MGP_NODShiLtJ_G0024923.1 mouse_genomes_project 19 39781641 39837639 + MGP_NODShiLtJ_P0051340 Pde6c protein_coding protein_coding MGP_NODShiLtJ_T0051341.1 MGP_NODShiLtJ_G0024923.1 mouse_genomes_project 19 39781641 39837639 + MGP_NODShiLtJ_P0051341 Pde6c protein_coding protein_coding MGP_NODShiLtJ_T0051342.1 MGP_NODShiLtJ_G0024923.1 mouse_genomes_project 19 39781806 39837431 + MGP_NODShiLtJ_P0051342 Pde6c protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050731.1 MGP_NODShiLtJ_G0024663.1 mouse_genomes_project 19 7582345 7606628 - MGP_NODShiLtJ_P0050731 Best1 protein_coding protein_coding MGP_NODShiLtJ_T0050732.1 MGP_NODShiLtJ_G0024663.1 mouse_genomes_project 19 7587717 7590085 - Best1 protein_coding processed_transcript MGP_NODShiLtJ_T0011375.1 MGP_NODShiLtJ_G0009508.1 mouse_genomes_project 19 62912237 62912321 - Gm22561 misc_RNA misc_RNA MGP_NODShiLtJ_T0010225.1 MGP_NODShiLtJ_G0008358.1 mouse_genomes_project 19 53187442 53187567 + Gm27749 miRNA miRNA MGP_NODShiLtJ_T0051008.1 MGP_NODShiLtJ_G0024801.1 mouse_genomes_project 19 17690029 17702415 + MGP_NODShiLtJ_P0051008 D030056L22Rik protein_coding protein_coding MGP_NODShiLtJ_T0051009.1 MGP_NODShiLtJ_G0024801.1 mouse_genomes_project 19 17690072 17702415 + MGP_NODShiLtJ_P0051009 D030056L22Rik protein_coding protein_coding MGP_NODShiLtJ_T0003801.1 MGP_NODShiLtJ_G0003400.1 mouse_genomes_project 19 4574794 4576554 + 1700105P06Rik antisense antisense MGP_NODShiLtJ_T0050777.1 MGP_NODShiLtJ_G0024684.1 mouse_genomes_project 19 8352992 8378653 + MGP_NODShiLtJ_P0050777 Vps37c protein_coding protein_coding MGP_NODShiLtJ_T0050101.1 MGP_NODShiLtJ_G0024486.1 mouse_genomes_project 19 1079654 1086060 - MGP_NODShiLtJ_P0050101 Rad9a protein_coding protein_coding MGP_NODShiLtJ_T0050031.1 MGP_NODShiLtJ_G0024469.1 mouse_genomes_project 19 863464 864988 + MGP_NODShiLtJ_P0050031 Nudt8 protein_coding protein_coding MGP_NODShiLtJ_T0050032.1 MGP_NODShiLtJ_G0024469.1 mouse_genomes_project 19 863510 868708 + MGP_NODShiLtJ_P0050032 Nudt8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050033.1 MGP_NODShiLtJ_G0024469.1 mouse_genomes_project 19 863515 864986 + MGP_NODShiLtJ_P0050033 Nudt8 protein_coding protein_coding MGP_NODShiLtJ_T0051979.1 MGP_NODShiLtJ_G0025135.1 mouse_genomes_project 19 65187462 65200293 - MGP_NODShiLtJ_P0051979 Prdx3 protein_coding protein_coding MGP_NODShiLtJ_T0050658.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6153263 6155209 - MGP_NODShiLtJ_P0050658 Taf6l protein_coding protein_coding MGP_NODShiLtJ_T0050659.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6155095 6170792 - MGP_NODShiLtJ_P0050659 Taf6l protein_coding protein_coding MGP_NODShiLtJ_T0050660.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6155228 6157704 - Taf6l protein_coding retained_intron MGP_NODShiLtJ_T0050661.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6155233 6170733 - MGP_NODShiLtJ_P0050661 Taf6l protein_coding protein_coding MGP_NODShiLtJ_T0050662.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6155235 6170792 - MGP_NODShiLtJ_P0050662 Taf6l protein_coding protein_coding MGP_NODShiLtJ_T0050663.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6155237 6170893 - MGP_NODShiLtJ_P0050663 Taf6l protein_coding protein_coding MGP_NODShiLtJ_T0050664.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6155270 6168475 - MGP_NODShiLtJ_P0050664 Taf6l protein_coding protein_coding MGP_NODShiLtJ_T0050665.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6155270 6168475 - MGP_NODShiLtJ_P0050665 Taf6l protein_coding protein_coding MGP_NODShiLtJ_T0050666.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6156178 6163320 - Taf6l protein_coding retained_intron MGP_NODShiLtJ_T0050667.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6162184 6170757 - Taf6l protein_coding retained_intron MGP_NODShiLtJ_T0050668.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6162820 6166799 - Taf6l protein_coding processed_transcript MGP_NODShiLtJ_T0050669.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6162846 6167153 - Taf6l protein_coding retained_intron MGP_NODShiLtJ_T0050670.1 MGP_NODShiLtJ_G0024637.1 mouse_genomes_project 19 6166286 6170741 - Taf6l protein_coding retained_intron MGP_NODShiLtJ_T0051154.1 MGP_NODShiLtJ_G0024852.1 mouse_genomes_project 19 29866476 29875968 - MGP_NODShiLtJ_P0051154 Plgrkt protein_coding protein_coding MGP_NODShiLtJ_T0051155.1 MGP_NODShiLtJ_G0024852.1 mouse_genomes_project 19 29867989 29869458 - Plgrkt protein_coding retained_intron MGP_NODShiLtJ_T0051156.1 MGP_NODShiLtJ_G0024852.1 mouse_genomes_project 19 29868626 29878966 - MGP_NODShiLtJ_P0051156 Plgrkt protein_coding protein_coding MGP_NODShiLtJ_T0051157.1 MGP_NODShiLtJ_G0024852.1 mouse_genomes_project 19 29868720 29879383 - MGP_NODShiLtJ_P0051157 Plgrkt protein_coding protein_coding MGP_NODShiLtJ_T0051158.1 MGP_NODShiLtJ_G0024852.1 mouse_genomes_project 19 29875946 29884869 - MGP_NODShiLtJ_P0051158 Plgrkt protein_coding protein_coding MGP_NODShiLtJ_T0051159.1 MGP_NODShiLtJ_G0024852.1 mouse_genomes_project 19 29878412 29881458 - Plgrkt protein_coding processed_transcript MGP_NODShiLtJ_T0051160.1 MGP_NODShiLtJ_G0024852.1 mouse_genomes_project 19 29879647 29882021 - Plgrkt protein_coding processed_transcript MGP_NODShiLtJ_T0051161.1 MGP_NODShiLtJ_G0024852.1 mouse_genomes_project 19 29881633 29884951 - Plgrkt protein_coding processed_transcript MGP_NODShiLtJ_T0051701.1 MGP_NODShiLtJ_G0025039.1 mouse_genomes_project 19 48842145 48847915 - MGP_NODShiLtJ_P0051701 Psd protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051702.1 MGP_NODShiLtJ_G0025039.1 mouse_genomes_project 19 48842152 48857223 - MGP_NODShiLtJ_P0051702 Psd protein_coding protein_coding MGP_NODShiLtJ_T0051703.1 MGP_NODShiLtJ_G0025039.1 mouse_genomes_project 19 48842152 48857223 - MGP_NODShiLtJ_P0051703 Psd protein_coding protein_coding MGP_NODShiLtJ_T0013269.1 MGP_NODShiLtJ_G0011377.1 mouse_genomes_project 19 25912226 25913726 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050710.1 MGP_NODShiLtJ_G0024654.1 mouse_genomes_project 19 6342357 6355597 + MGP_NODShiLtJ_P0050710 Mta2 protein_coding protein_coding MGP_NODShiLtJ_T0050711.1 MGP_NODShiLtJ_G0024654.1 mouse_genomes_project 19 6342975 6347303 + Mta2 protein_coding processed_transcript MGP_NODShiLtJ_T0050712.1 MGP_NODShiLtJ_G0024654.1 mouse_genomes_project 19 6342988 6348157 + Mta2 protein_coding processed_transcript MGP_NODShiLtJ_T0050713.1 MGP_NODShiLtJ_G0024654.1 mouse_genomes_project 19 6344516 6348540 + Mta2 protein_coding retained_intron MGP_NODShiLtJ_T0050714.1 MGP_NODShiLtJ_G0024654.1 mouse_genomes_project 19 6346524 6348178 + Mta2 protein_coding processed_transcript MGP_NODShiLtJ_T0050715.1 MGP_NODShiLtJ_G0024654.1 mouse_genomes_project 19 6347829 6349102 + Mta2 protein_coding retained_intron MGP_NODShiLtJ_T0007012.1 MGP_NODShiLtJ_G0005753.1 mouse_genomes_project 19 19920390 19938587 + 1500015L24Rik lincRNA lincRNA MGP_NODShiLtJ_T0007013.1 MGP_NODShiLtJ_G0005753.1 mouse_genomes_project 19 19938165 19938579 + 1500015L24Rik lincRNA lincRNA MGP_NODShiLtJ_T0050955.1 MGP_NODShiLtJ_G0024770.1 mouse_genomes_project 19 11541566 11542496 + MGP_NODShiLtJ_P0050955 Olfr1469 protein_coding protein_coding MGP_NODShiLtJ_T0050220.1 MGP_NODShiLtJ_G0024528.1 mouse_genomes_project 19 2308480 2316908 + MGP_NODShiLtJ_P0050220 Catsper1 protein_coding protein_coding MGP_NODShiLtJ_T0051034.1 MGP_NODShiLtJ_G0024811.1 mouse_genomes_project 19 21252127 21329541 - MGP_NODShiLtJ_P0051034 1110059E24Rik protein_coding protein_coding MGP_NODShiLtJ_T0051035.1 MGP_NODShiLtJ_G0024811.1 mouse_genomes_project 19 21271444 21329613 - MGP_NODShiLtJ_P0051035 1110059E24Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051036.1 MGP_NODShiLtJ_G0024811.1 mouse_genomes_project 19 21272400 21307717 - MGP_NODShiLtJ_P0051036 1110059E24Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051037.1 MGP_NODShiLtJ_G0024811.1 mouse_genomes_project 19 21272420 21329886 - MGP_NODShiLtJ_P0051037 1110059E24Rik protein_coding protein_coding MGP_NODShiLtJ_T0051038.1 MGP_NODShiLtJ_G0024811.1 mouse_genomes_project 19 21272555 21329730 - MGP_NODShiLtJ_P0051038 1110059E24Rik protein_coding protein_coding MGP_NODShiLtJ_T0051039.1 MGP_NODShiLtJ_G0024811.1 mouse_genomes_project 19 21273044 21279452 - 1110059E24Rik protein_coding processed_transcript MGP_NODShiLtJ_T0051040.1 MGP_NODShiLtJ_G0024811.1 mouse_genomes_project 19 21273056 21329423 - MGP_NODShiLtJ_P0051040 1110059E24Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051041.1 MGP_NODShiLtJ_G0024811.1 mouse_genomes_project 19 21290355 21329606 - 1110059E24Rik protein_coding retained_intron MGP_NODShiLtJ_T0050544.1 MGP_NODShiLtJ_G0024606.1 mouse_genomes_project 19 4129485 4135854 - MGP_NODShiLtJ_P0050544 Vegfb protein_coding protein_coding MGP_NODShiLtJ_T0050545.1 MGP_NODShiLtJ_G0024606.1 mouse_genomes_project 19 4129485 4135832 - MGP_NODShiLtJ_P0050545 Vegfb protein_coding protein_coding MGP_NODShiLtJ_T0050546.1 MGP_NODShiLtJ_G0024606.1 mouse_genomes_project 19 4134596 4135343 - Vegfb protein_coding retained_intron MGP_NODShiLtJ_T0003803.1 MGP_NODShiLtJ_G0003402.1 mouse_genomes_project 19 9250559 9251302 - Gm19261 antisense antisense MGP_NODShiLtJ_T0099073.1 MGP_NODShiLtJ_G0037467.1 mouse_genomes_project 19 30545242 30545408 + Gm26046 snRNA snRNA MGP_NODShiLtJ_T0051016.1 MGP_NODShiLtJ_G0024804.1 mouse_genomes_project 19 19872719 19905671 - MGP_NODShiLtJ_P0051016 Anxa1 protein_coding protein_coding MGP_NODShiLtJ_T0051017.1 MGP_NODShiLtJ_G0024804.1 mouse_genomes_project 19 19872847 19905399 - Anxa1 protein_coding processed_transcript MGP_NODShiLtJ_T0051018.1 MGP_NODShiLtJ_G0024804.1 mouse_genomes_project 19 19872847 19888686 - Anxa1 protein_coding retained_intron MGP_NODShiLtJ_T0051019.1 MGP_NODShiLtJ_G0024804.1 mouse_genomes_project 19 19890776 19892470 - Anxa1 protein_coding retained_intron MGP_NODShiLtJ_T0051020.1 MGP_NODShiLtJ_G0024804.1 mouse_genomes_project 19 19890776 19893902 - Anxa1 protein_coding retained_intron MGP_NODShiLtJ_T0051021.1 MGP_NODShiLtJ_G0024804.1 mouse_genomes_project 19 19891998 19896006 - Anxa1 protein_coding retained_intron MGP_NODShiLtJ_T0051022.1 MGP_NODShiLtJ_G0024804.1 mouse_genomes_project 19 19893539 19905378 - Anxa1 protein_coding processed_transcript MGP_NODShiLtJ_T0013276.1 MGP_NODShiLtJ_G0011384.1 mouse_genomes_project 19 42601267 42602025 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0051442.1 MGP_NODShiLtJ_G0024957.1 mouse_genomes_project 19 43292754 43411483 - MGP_NODShiLtJ_P0051442 Pik3ap1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0013275.1 MGP_NODShiLtJ_G0011383.1 mouse_genomes_project 19 33330937 33358558 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0051202.1 MGP_NODShiLtJ_G0024865.1 mouse_genomes_project 19 31212718 31218073 - MGP_NODShiLtJ_P0051202 Dkk1 protein_coding protein_coding MGP_NODShiLtJ_T0051874.1 MGP_NODShiLtJ_G0025100.1 mouse_genomes_project 19 60289321 60336878 + MGP_NODShiLtJ_P0051874 Casp7 protein_coding protein_coding MGP_NODShiLtJ_T0051242.1 MGP_NODShiLtJ_G0024881.1 mouse_genomes_project 19 34852752 34857675 + MGP_NODShiLtJ_P0051242 protein_coding protein_coding MGP_NODShiLtJ_T0050028.1 MGP_NODShiLtJ_G0024466.1 mouse_genomes_project 19 826714 844557 + MGP_NODShiLtJ_P0050028 Aldh3b2 protein_coding protein_coding MGP_NODShiLtJ_T0017536.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100217 6103188 + Snhg1 processed_transcript lincRNA MGP_NODShiLtJ_T0017537.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100229 6103186 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017538.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100229 6103187 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017539.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100749 6103188 + Snhg1 processed_transcript lincRNA MGP_NODShiLtJ_T0017540.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100875 6102637 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017541.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100884 6101597 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017542.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100891 6103090 + Snhg1 processed_transcript lincRNA MGP_NODShiLtJ_T0017543.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100902 6103188 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017544.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6100906 6102086 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017545.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6101100 6102048 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017546.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6101137 6102580 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017547.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6101147 6102267 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017548.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6101407 6103188 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017549.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6101641 6103188 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017550.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6101766 6102747 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017551.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6101848 6103188 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017552.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6102219 6103188 + Snhg1 processed_transcript retained_intron MGP_NODShiLtJ_T0017553.1 MGP_NODShiLtJ_G0015249.1 mouse_genomes_project 19 6102244 6103188 + Snhg1 processed_transcript lincRNA MGP_NODShiLtJ_T0049967.1 MGP_NODShiLtJ_G0024456.1 mouse_genomes_project 19 222826 361736 - MGP_NODShiLtJ_P0049967 Ppp6r3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0049968.1 MGP_NODShiLtJ_G0024456.1 mouse_genomes_project 19 222830 361759 - MGP_NODShiLtJ_P0049968 Ppp6r3 protein_coding protein_coding MGP_NODShiLtJ_T0049969.1 MGP_NODShiLtJ_G0024456.1 mouse_genomes_project 19 222830 361759 - MGP_NODShiLtJ_P0049969 Ppp6r3 protein_coding protein_coding MGP_NODShiLtJ_T0049970.1 MGP_NODShiLtJ_G0024456.1 mouse_genomes_project 19 222830 361759 - MGP_NODShiLtJ_P0049970 Ppp6r3 protein_coding protein_coding MGP_NODShiLtJ_T0050961.1 MGP_NODShiLtJ_G0024776.1 mouse_genomes_project 19 12049708 12050656 + MGP_NODShiLtJ_P0050961 Olfr1494 protein_coding protein_coding MGP_NODShiLtJ_T0051002.1 MGP_NODShiLtJ_G0024799.1 mouse_genomes_project 19 17591126 17595575 + Nmrk1 protein_coding retained_intron MGP_NODShiLtJ_T0051003.1 MGP_NODShiLtJ_G0024799.1 mouse_genomes_project 19 17591126 17613218 + MGP_NODShiLtJ_P0051003 Nmrk1 protein_coding protein_coding MGP_NODShiLtJ_T0051004.1 MGP_NODShiLtJ_G0024799.1 mouse_genomes_project 19 17591126 17612945 + MGP_NODShiLtJ_P0051004 Nmrk1 protein_coding protein_coding MGP_NODShiLtJ_T0051005.1 MGP_NODShiLtJ_G0024799.1 mouse_genomes_project 19 17591135 17600399 + MGP_NODShiLtJ_P0051005 Nmrk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051006.1 MGP_NODShiLtJ_G0024799.1 mouse_genomes_project 19 17591138 17596482 + Nmrk1 protein_coding retained_intron MGP_NODShiLtJ_T0050754.1 MGP_NODShiLtJ_G0024671.1 mouse_genomes_project 19 7870959 7929670 - MGP_NODShiLtJ_P0050754 Dagla protein_coding protein_coding MGP_NODShiLtJ_T0050755.1 MGP_NODShiLtJ_G0024671.1 mouse_genomes_project 19 7870962 7929650 - MGP_NODShiLtJ_P0050755 Dagla protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050756.1 MGP_NODShiLtJ_G0024671.1 mouse_genomes_project 19 7879024 7882455 - Dagla protein_coding processed_transcript MGP_NODShiLtJ_T0050208.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2056394 2067173 - MGP_NODShiLtJ_P0050208 Klc2 protein_coding protein_coding MGP_NODShiLtJ_T0050209.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2056394 2066913 - MGP_NODShiLtJ_P0050209 Klc2 protein_coding protein_coding MGP_NODShiLtJ_T0050210.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2056394 2066910 - MGP_NODShiLtJ_P0050210 Klc2 protein_coding protein_coding MGP_NODShiLtJ_T0050211.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2056396 2066911 - MGP_NODShiLtJ_P0050211 Klc2 protein_coding protein_coding MGP_NODShiLtJ_T0050212.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2056817 2058145 - Klc2 protein_coding retained_intron MGP_NODShiLtJ_T0050213.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2058091 2060113 - Klc2 protein_coding retained_intron MGP_NODShiLtJ_T0050214.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2059034 2060652 - Klc2 protein_coding retained_intron MGP_NODShiLtJ_T0050215.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2062177 2062678 - Klc2 protein_coding retained_intron MGP_NODShiLtJ_T0050216.1 MGP_NODShiLtJ_G0024524.1 mouse_genomes_project 19 2062477 2066199 - MGP_NODShiLtJ_P0050216 Klc2 protein_coding protein_coding MGP_NODShiLtJ_T0050690.1 MGP_NODShiLtJ_G0024645.1 mouse_genomes_project 19 6264121 6269300 + MGP_NODShiLtJ_P0050690 Ubxn1 protein_coding protein_coding MGP_NODShiLtJ_T0050691.1 MGP_NODShiLtJ_G0024645.1 mouse_genomes_project 19 6264205 6269308 + MGP_NODShiLtJ_P0050691 Ubxn1 protein_coding protein_coding MGP_NODShiLtJ_T0050901.1 MGP_NODShiLtJ_G0024731.1 mouse_genomes_project 19 10087434 10088373 - MGP_NODShiLtJ_P0050901 Olfr262 protein_coding protein_coding MGP_NODShiLtJ_T0100320.1 MGP_NODShiLtJ_G0038714.1 mouse_genomes_project 19 9397751 9397801 - Gm24599 snoRNA snoRNA MGP_NODShiLtJ_T0050762.1 MGP_NODShiLtJ_G0024674.1 mouse_genomes_project 19 8110699 8119342 - MGP_NODShiLtJ_P0050762 Ppp1r32 protein_coding protein_coding MGP_NODShiLtJ_T0051319.1 MGP_NODShiLtJ_G0024912.1 mouse_genomes_project 19 38758254 38773817 + MGP_NODShiLtJ_P0051319 March5 protein_coding protein_coding MGP_NODShiLtJ_T0051320.1 MGP_NODShiLtJ_G0024912.1 mouse_genomes_project 19 38758262 38770382 + March5 protein_coding retained_intron MGP_NODShiLtJ_T0051321.1 MGP_NODShiLtJ_G0024912.1 mouse_genomes_project 19 38759723 38777140 + MGP_NODShiLtJ_P0051321 March5 protein_coding protein_coding MGP_NODShiLtJ_T0013283.1 MGP_NODShiLtJ_G0011391.1 mouse_genomes_project 19 65131207 65131575 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0051721.1 MGP_NODShiLtJ_G0025048.1 mouse_genomes_project 19 49185869 49248429 + MGP_NODShiLtJ_P0051721 Wbp1l protein_coding protein_coding MGP_NODShiLtJ_T0051722.1 MGP_NODShiLtJ_G0025048.1 mouse_genomes_project 19 49185898 49248425 + MGP_NODShiLtJ_P0051722 Wbp1l protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051723.1 MGP_NODShiLtJ_G0025048.1 mouse_genomes_project 19 49185899 49248422 + MGP_NODShiLtJ_P0051723 Wbp1l protein_coding protein_coding MGP_NODShiLtJ_T0051724.1 MGP_NODShiLtJ_G0025048.1 mouse_genomes_project 19 49185909 49235819 + Wbp1l protein_coding processed_transcript MGP_NODShiLtJ_T0051725.1 MGP_NODShiLtJ_G0025048.1 mouse_genomes_project 19 49212068 49243584 + Wbp1l protein_coding processed_transcript MGP_NODShiLtJ_T0051726.1 MGP_NODShiLtJ_G0025048.1 mouse_genomes_project 19 49212068 49248427 + MGP_NODShiLtJ_P0051726 Wbp1l protein_coding protein_coding MGP_NODShiLtJ_T0050991.1 MGP_NODShiLtJ_G0024795.1 mouse_genomes_project 19 16139210 16172804 - MGP_NODShiLtJ_P0050991 Gcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0050992.1 MGP_NODShiLtJ_G0024795.1 mouse_genomes_project 19 16139212 16155733 - MGP_NODShiLtJ_P0050992 Gcnt1 protein_coding protein_coding MGP_NODShiLtJ_T0050993.1 MGP_NODShiLtJ_G0024795.1 mouse_genomes_project 19 16146131 16172804 - Gcnt1 protein_coding retained_intron MGP_NODShiLtJ_T0050693.1 MGP_NODShiLtJ_G0024647.1 mouse_genomes_project 19 6278156 6289489 + MGP_NODShiLtJ_P0050693 Lbhd1 protein_coding protein_coding MGP_NODShiLtJ_T0050694.1 MGP_NODShiLtJ_G0024647.1 mouse_genomes_project 19 6278348 6281466 + Lbhd1 protein_coding retained_intron MGP_NODShiLtJ_T0050695.1 MGP_NODShiLtJ_G0024647.1 mouse_genomes_project 19 6278354 6281683 + MGP_NODShiLtJ_P0050695 Lbhd1 protein_coding protein_coding MGP_NODShiLtJ_T0050702.1 MGP_NODShiLtJ_G0024647.1 mouse_genomes_project 19 6283702 6287520 + Lbhd1 protein_coding processed_transcript MGP_NODShiLtJ_T0049963.1 MGP_NODShiLtJ_G0024453.1 mouse_genomes_project 19 86049 152330 + MGP_NODShiLtJ_P0049963 Cpt1a protein_coding protein_coding MGP_NODShiLtJ_T0051483.1 MGP_NODShiLtJ_G0024970.1 mouse_genomes_project 19 44117512 44126631 + MGP_NODShiLtJ_P0051483 Ankrd2 protein_coding protein_coding MGP_NODShiLtJ_T0051813.1 MGP_NODShiLtJ_G0025085.1 mouse_genomes_project 19 57236989 57287310 + MGP_NODShiLtJ_P0051813 Smc3 protein_coding protein_coding MGP_NODShiLtJ_T0051814.1 MGP_NODShiLtJ_G0025085.1 mouse_genomes_project 19 57275257 57276286 + Smc3 protein_coding retained_intron MGP_NODShiLtJ_T0051815.1 MGP_NODShiLtJ_G0025085.1 mouse_genomes_project 19 57283795 57285878 + Smc3 protein_coding retained_intron MGP_NODShiLtJ_T0010207.1 MGP_NODShiLtJ_G0008340.1 mouse_genomes_project 19 35471799 35471908 - Gm23060 miRNA miRNA MGP_NODShiLtJ_T0050807.1 MGP_NODShiLtJ_G0024692.1 mouse_genomes_project 19 8624765 8631813 + MGP_NODShiLtJ_P0050807 Ptgdr2 protein_coding protein_coding MGP_NODShiLtJ_T0010228.1 MGP_NODShiLtJ_G0008361.1 mouse_genomes_project 19 62100837 62100907 + Mir5623 miRNA miRNA MGP_NODShiLtJ_T0051941.1 MGP_NODShiLtJ_G0025116.1 mouse_genomes_project 19 62850557 62866692 + MGP_NODShiLtJ_P0051941 Pnliprp1 protein_coding protein_coding MGP_NODShiLtJ_T0050342.1 MGP_NODShiLtJ_G0024569.1 mouse_genomes_project 19 3119877 3121158 + MGP_NODShiLtJ_P0050342 Znhit2 protein_coding protein_coding MGP_NODShiLtJ_T0051720.1 MGP_NODShiLtJ_G0025047.1 mouse_genomes_project 19 49146430 49183691 + MGP_NODShiLtJ_P0051720 Sfxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050917.1 MGP_NODShiLtJ_G0024744.1 mouse_genomes_project 19 10514862 10538369 + MGP_NODShiLtJ_P0050917 Glyat protein_coding protein_coding MGP_NODShiLtJ_T0050918.1 MGP_NODShiLtJ_G0024744.1 mouse_genomes_project 19 10515069 10533630 + Glyat protein_coding retained_intron MGP_NODShiLtJ_T0050919.1 MGP_NODShiLtJ_G0024744.1 mouse_genomes_project 19 10515069 10516660 + Glyat protein_coding processed_transcript MGP_NODShiLtJ_T0050920.1 MGP_NODShiLtJ_G0024744.1 mouse_genomes_project 19 10515087 10539031 + MGP_NODShiLtJ_P0050920 Glyat protein_coding protein_coding MGP_NODShiLtJ_T0050921.1 MGP_NODShiLtJ_G0024744.1 mouse_genomes_project 19 10520986 10535544 + Glyat protein_coding processed_transcript MGP_NODShiLtJ_T0003821.1 MGP_NODShiLtJ_G0003415.1 mouse_genomes_project 19 50266796 50279058 - Gm16068 antisense antisense MGP_NODShiLtJ_T0099084.1 MGP_NODShiLtJ_G0037478.1 mouse_genomes_project 19 56720630 56720737 - Gm24724 snRNA snRNA MGP_NODShiLtJ_T0013256.1 MGP_NODShiLtJ_G0011364.1 mouse_genomes_project 19 7108973 7113792 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050241.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2462806 2466410 + MGP_NODShiLtJ_P0050241 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050242.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463148 2464898 + MGP_NODShiLtJ_P0050242 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050243.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463521 2470719 + MGP_NODShiLtJ_P0050243 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050244.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463540 2467232 + Efemp2 protein_coding retained_intron MGP_NODShiLtJ_T0050245.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463569 2470719 + MGP_NODShiLtJ_P0050245 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050246.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463569 2469607 + MGP_NODShiLtJ_P0050246 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050247.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463576 2467088 + MGP_NODShiLtJ_P0050247 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050248.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463579 2470719 + MGP_NODShiLtJ_P0050248 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050249.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463606 2464298 + Efemp2 protein_coding retained_intron MGP_NODShiLtJ_T0050250.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463897 2467152 + MGP_NODShiLtJ_P0050250 Efemp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050251.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2463949 2470641 + MGP_NODShiLtJ_P0050251 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050252.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2464134 2468945 + MGP_NODShiLtJ_P0050252 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050253.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2468910 2469782 + MGP_NODShiLtJ_P0050253 Efemp2 protein_coding protein_coding MGP_NODShiLtJ_T0050254.1 MGP_NODShiLtJ_G0024540.1 mouse_genomes_project 19 2468988 2470525 + MGP_NODShiLtJ_P0050254 Efemp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050627.1 MGP_NODShiLtJ_G0024633.1 mouse_genomes_project 19 6112865 6117588 + MGP_NODShiLtJ_P0050627 Wdr74 protein_coding protein_coding MGP_NODShiLtJ_T0051991.1 MGP_NODShiLtJ_G0025138.1 mouse_genomes_project 19 65625880 65629315 - MGP_NODShiLtJ_P0051991 Csf2ra protein_coding protein_coding MGP_NODShiLtJ_T0100331.1 MGP_NODShiLtJ_G0038725.1 mouse_genomes_project 19 39711303 39711428 + Gm23300 snoRNA snoRNA MGP_NODShiLtJ_T0099085.1 MGP_NODShiLtJ_G0037479.1 mouse_genomes_project 19 65527467 65527644 - Gm23102 snRNA snRNA MGP_NODShiLtJ_T0007023.1 MGP_NODShiLtJ_G0005760.1 mouse_genomes_project 19 30012491 30049630 - A930007I19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007024.1 MGP_NODShiLtJ_G0005760.1 mouse_genomes_project 19 30013070 30050767 - A930007I19Rik lincRNA lincRNA MGP_NODShiLtJ_T0007025.1 MGP_NODShiLtJ_G0005760.1 mouse_genomes_project 19 30030260 30049625 - A930007I19Rik lincRNA lincRNA MGP_NODShiLtJ_T0051240.1 MGP_NODShiLtJ_G0024879.1 mouse_genomes_project 19 34558025 34793877 - MGP_NODShiLtJ_P0051240 Lipo3 protein_coding protein_coding MGP_NODShiLtJ_T0050298.1 MGP_NODShiLtJ_G0024554.1 mouse_genomes_project 19 2750139 2751706 - MGP_NODShiLtJ_P0050298 Fam89b protein_coding protein_coding MGP_NODShiLtJ_T0050299.1 MGP_NODShiLtJ_G0024554.1 mouse_genomes_project 19 2750139 2751686 - MGP_NODShiLtJ_P0050299 Fam89b protein_coding protein_coding MGP_NODShiLtJ_T0050300.1 MGP_NODShiLtJ_G0024554.1 mouse_genomes_project 19 2750139 2751704 - MGP_NODShiLtJ_P0050300 Fam89b protein_coding protein_coding MGP_NODShiLtJ_T0006994.1 MGP_NODShiLtJ_G0005741.1 mouse_genomes_project 19 1051165 1055884 + Gm17552 lincRNA lincRNA MGP_NODShiLtJ_T0050227.1 MGP_NODShiLtJ_G0024534.1 mouse_genomes_project 19 2410316 2411477 - Drap1 protein_coding retained_intron MGP_NODShiLtJ_T0050228.1 MGP_NODShiLtJ_G0024534.1 mouse_genomes_project 19 2410320 2411774 - Drap1 protein_coding retained_intron MGP_NODShiLtJ_T0050229.1 MGP_NODShiLtJ_G0024534.1 mouse_genomes_project 19 2410354 2412268 - MGP_NODShiLtJ_P0050229 Drap1 protein_coding protein_coding MGP_NODShiLtJ_T0050230.1 MGP_NODShiLtJ_G0024534.1 mouse_genomes_project 19 2410380 2412341 - Drap1 protein_coding retained_intron MGP_NODShiLtJ_T0050231.1 MGP_NODShiLtJ_G0024534.1 mouse_genomes_project 19 2410380 2413135 - MGP_NODShiLtJ_P0050231 Drap1 protein_coding protein_coding MGP_NODShiLtJ_T0050232.1 MGP_NODShiLtJ_G0024534.1 mouse_genomes_project 19 2410414 2411635 - Drap1 protein_coding retained_intron MGP_NODShiLtJ_T0050233.1 MGP_NODShiLtJ_G0024534.1 mouse_genomes_project 19 2411160 2412333 - Drap1 protein_coding retained_intron MGP_NODShiLtJ_T0050805.1 MGP_NODShiLtJ_G0024691.1 mouse_genomes_project 19 8593433 8595436 - MGP_NODShiLtJ_P0050805 Zp1 protein_coding protein_coding MGP_NODShiLtJ_T0050806.1 MGP_NODShiLtJ_G0024691.1 mouse_genomes_project 19 8593435 8599770 - MGP_NODShiLtJ_P0050806 Zp1 protein_coding protein_coding MGP_NODShiLtJ_T0050371.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3141294 3145471 - MGP_NODShiLtJ_P0050371 Zfpl1 protein_coding protein_coding MGP_NODShiLtJ_T0050372.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3141297 3143359 - Zfpl1 protein_coding retained_intron MGP_NODShiLtJ_T0050373.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3141700 3145443 - MGP_NODShiLtJ_P0050373 Zfpl1 protein_coding protein_coding MGP_NODShiLtJ_T0050374.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3142392 3145221 - MGP_NODShiLtJ_P0050374 Zfpl1 protein_coding protein_coding MGP_NODShiLtJ_T0050375.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3142722 3145422 - Zfpl1 protein_coding retained_intron MGP_NODShiLtJ_T0050376.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3142742 3145432 - MGP_NODShiLtJ_P0050376 Zfpl1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050377.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3142783 3144835 - Zfpl1 protein_coding retained_intron MGP_NODShiLtJ_T0050378.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3142788 3145472 - MGP_NODShiLtJ_P0050378 Zfpl1 protein_coding protein_coding MGP_NODShiLtJ_T0050379.1 MGP_NODShiLtJ_G0024574.1 mouse_genomes_project 19 3143133 3145455 - MGP_NODShiLtJ_P0050379 Zfpl1 protein_coding protein_coding MGP_NODShiLtJ_T0051283.1 MGP_NODShiLtJ_G0024903.1 mouse_genomes_project 19 37489078 37511003 + MGP_NODShiLtJ_P0051283 Rpp30 protein_coding protein_coding MGP_NODShiLtJ_T0051825.1 MGP_NODShiLtJ_G0025090.1 mouse_genomes_project 19 57727980 57731781 + MGP_NODShiLtJ_P0051825 Adra2a protein_coding protein_coding MGP_NODShiLtJ_T0003802.1 MGP_NODShiLtJ_G0003401.1 mouse_genomes_project 19 8915205 9017821 + 4930526L06Rik antisense antisense MGP_NODShiLtJ_T0050936.1 MGP_NODShiLtJ_G0024751.1 mouse_genomes_project 19 10770948 10771978 + MGP_NODShiLtJ_P0050936 Olfr1444 protein_coding protein_coding MGP_NODShiLtJ_T0099080.1 MGP_NODShiLtJ_G0037474.1 mouse_genomes_project 19 47272857 47272964 + Gm25482 snRNA snRNA MGP_NODShiLtJ_T0100323.1 MGP_NODShiLtJ_G0038717.1 mouse_genomes_project 19 18343366 18343498 + Gm25437 snoRNA snoRNA MGP_NODShiLtJ_T0051163.1 MGP_NODShiLtJ_G0024854.1 mouse_genomes_project 19 29933311 29996183 + MGP_NODShiLtJ_P0051163 Pdcd1lg2 protein_coding protein_coding MGP_NODShiLtJ_T0051441.1 MGP_NODShiLtJ_G0024956.1 mouse_genomes_project 19 43227799 43283700 - MGP_NODShiLtJ_P0051441 Tm9sf3 protein_coding protein_coding MGP_NODShiLtJ_T0050556.1 MGP_NODShiLtJ_G0024614.1 mouse_genomes_project 19 4366069 4374002 - MGP_NODShiLtJ_P0050556 Otub1 protein_coding protein_coding MGP_NODShiLtJ_T0050557.1 MGP_NODShiLtJ_G0024614.1 mouse_genomes_project 19 4366077 4373920 - MGP_NODShiLtJ_P0050557 Otub1 protein_coding protein_coding MGP_NODShiLtJ_T0050558.1 MGP_NODShiLtJ_G0024614.1 mouse_genomes_project 19 4367411 4368336 - Otub1 protein_coding retained_intron MGP_NODShiLtJ_T0050559.1 MGP_NODShiLtJ_G0024614.1 mouse_genomes_project 19 4367582 4373461 - MGP_NODShiLtJ_P0050559 Otub1 protein_coding protein_coding MGP_NODShiLtJ_T0050560.1 MGP_NODShiLtJ_G0024614.1 mouse_genomes_project 19 4367612 4372105 - Otub1 protein_coding retained_intron MGP_NODShiLtJ_T0050613.1 MGP_NODShiLtJ_G0024628.1 mouse_genomes_project 19 5340462 5402656 - MGP_NODShiLtJ_P0050613 protein_coding protein_coding MGP_NODShiLtJ_T0013257.1 MGP_NODShiLtJ_G0011365.1 mouse_genomes_project 19 9130843 9131900 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050561.1 MGP_NODShiLtJ_G0024615.1 mouse_genomes_project 19 4384989 4389012 - MGP_NODShiLtJ_P0050561 Cox8a protein_coding protein_coding MGP_NODShiLtJ_T0050528.1 MGP_NODShiLtJ_G0024599.1 mouse_genomes_project 19 4057939 4060894 - MGP_NODShiLtJ_P0050528 Tex40 protein_coding protein_coding MGP_NODShiLtJ_T0010192.1 MGP_NODShiLtJ_G0008325.1 mouse_genomes_project 19 3958435 3958494 - Mir5046 miRNA miRNA MGP_NODShiLtJ_T0010194.1 MGP_NODShiLtJ_G0008327.1 mouse_genomes_project 19 4621847 4621917 + Mir6991 miRNA miRNA MGP_NODShiLtJ_T0051730.1 MGP_NODShiLtJ_G0025050.1 mouse_genomes_project 19 49284363 49298334 + MGP_NODShiLtJ_P0051730 Borcs7 protein_coding protein_coding MGP_NODShiLtJ_T0051439.1 MGP_NODShiLtJ_G0024955.1 mouse_genomes_project 19 43099365 43223733 - MGP_NODShiLtJ_P0051439 Tll2 protein_coding protein_coding MGP_NODShiLtJ_T0051440.1 MGP_NODShiLtJ_G0024955.1 mouse_genomes_project 19 43099365 43223733 - MGP_NODShiLtJ_P0051440 Tll2 protein_coding protein_coding MGP_NODShiLtJ_T0017568.1 MGP_NODShiLtJ_G0015256.1 mouse_genomes_project 19 28339183 28340680 + Gm20407 processed_transcript processed_transcript MGP_NODShiLtJ_T0051152.1 MGP_NODShiLtJ_G0024851.1 mouse_genomes_project 19 29847492 29850875 - Rln1 protein_coding retained_intron MGP_NODShiLtJ_T0051153.1 MGP_NODShiLtJ_G0024851.1 mouse_genomes_project 19 29848029 29850993 - MGP_NODShiLtJ_P0051153 Rln1 protein_coding protein_coding MGP_NODShiLtJ_T0050051.1 MGP_NODShiLtJ_G0024474.1 mouse_genomes_project 19 957364 961463 + MGP_NODShiLtJ_P0050051 Cabp2 protein_coding protein_coding MGP_NODShiLtJ_T0050052.1 MGP_NODShiLtJ_G0024474.1 mouse_genomes_project 19 958274 963123 + MGP_NODShiLtJ_P0050052 Cabp2 protein_coding protein_coding MGP_NODShiLtJ_T0050053.1 MGP_NODShiLtJ_G0024474.1 mouse_genomes_project 19 959276 963127 + MGP_NODShiLtJ_P0050053 Cabp2 protein_coding protein_coding MGP_NODShiLtJ_T0050054.1 MGP_NODShiLtJ_G0024474.1 mouse_genomes_project 19 959305 963127 + MGP_NODShiLtJ_P0050054 Cabp2 protein_coding protein_coding MGP_NODShiLtJ_T0050055.1 MGP_NODShiLtJ_G0024474.1 mouse_genomes_project 19 962261 963124 + Cabp2 protein_coding processed_transcript MGP_NODShiLtJ_T0097995.1 MGP_NODShiLtJ_G0036407.1 mouse_genomes_project 19 36932786 36932917 - Gm22853 rRNA rRNA MGP_NODShiLtJ_T0050282.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2684733 2711014 - MGP_NODShiLtJ_P0050282 Pcnx3 protein_coding protein_coding MGP_NODShiLtJ_T0050283.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2684736 2694046 - Pcnx3 protein_coding retained_intron MGP_NODShiLtJ_T0050284.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2684738 2710255 - MGP_NODShiLtJ_P0050284 Pcnx3 protein_coding protein_coding MGP_NODShiLtJ_T0050285.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2685334 2686297 - Pcnx3 protein_coding retained_intron MGP_NODShiLtJ_T0050286.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2685514 2687081 - MGP_NODShiLtJ_P0050286 Pcnx3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050287.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2686089 2686625 - Pcnx3 protein_coding retained_intron MGP_NODShiLtJ_T0050288.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2693390 2705051 - MGP_NODShiLtJ_P0050288 Pcnx3 protein_coding protein_coding MGP_NODShiLtJ_T0050289.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2695021 2699957 - MGP_NODShiLtJ_P0050289 Pcnx3 protein_coding protein_coding MGP_NODShiLtJ_T0050290.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2699362 2703726 - MGP_NODShiLtJ_P0050290 Pcnx3 protein_coding protein_coding MGP_NODShiLtJ_T0050291.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2699782 2704256 - MGP_NODShiLtJ_P0050291 Pcnx3 protein_coding protein_coding MGP_NODShiLtJ_T0050292.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2700313 2701916 - Pcnx3 protein_coding retained_intron MGP_NODShiLtJ_T0050293.1 MGP_NODShiLtJ_G0024550.1 mouse_genomes_project 19 2704123 2710801 - Pcnx3 protein_coding retained_intron MGP_NODShiLtJ_T0050959.1 MGP_NODShiLtJ_G0024774.1 mouse_genomes_project 19 11930239 11931190 + MGP_NODShiLtJ_P0050959 Olfr1490 protein_coding protein_coding MGP_NODShiLtJ_T0100337.1 MGP_NODShiLtJ_G0038731.1 mouse_genomes_project 19 65089026 65089158 - Snora19 snoRNA snoRNA MGP_NODShiLtJ_T0007030.1 MGP_NODShiLtJ_G0005764.1 mouse_genomes_project 19 36241117 36245163 - Gm5248 lincRNA lincRNA MGP_NODShiLtJ_T0013271.1 MGP_NODShiLtJ_G0011379.1 mouse_genomes_project 19 29168695 29169088 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0099063.1 MGP_NODShiLtJ_G0037457.1 mouse_genomes_project 19 4419251 4419355 + Gm22113 snRNA snRNA MGP_NODShiLtJ_T0050026.1 MGP_NODShiLtJ_G0024465.1 mouse_genomes_project 19 811422 826499 + MGP_NODShiLtJ_P0050026 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050027.1 MGP_NODShiLtJ_G0024465.1 mouse_genomes_project 19 819144 824579 + MGP_NODShiLtJ_P0050027 protein_coding protein_coding MGP_NODShiLtJ_T0051732.1 MGP_NODShiLtJ_G0025052.1 mouse_genomes_project 19 49367219 49487288 + MGP_NODShiLtJ_P0051732 Cnnm2 protein_coding protein_coding MGP_NODShiLtJ_T0051733.1 MGP_NODShiLtJ_G0025052.1 mouse_genomes_project 19 49367219 49487288 + MGP_NODShiLtJ_P0051733 Cnnm2 protein_coding protein_coding MGP_NODShiLtJ_T0003824.1 MGP_NODShiLtJ_G0003418.1 mouse_genomes_project 19 62261451 62294108 + Gm16277 antisense antisense MGP_NODShiLtJ_T0050952.1 MGP_NODShiLtJ_G0024767.1 mouse_genomes_project 19 11406476 11407400 - MGP_NODShiLtJ_P0050952 Olfr1465 protein_coding protein_coding MGP_NODShiLtJ_T0051237.1 MGP_NODShiLtJ_G0024877.1 mouse_genomes_project 19 34482277 34595264 - MGP_NODShiLtJ_P0051237 Lipo2 protein_coding protein_coding MGP_NODShiLtJ_T0007016.1 MGP_NODShiLtJ_G0005756.1 mouse_genomes_project 19 24008552 24010973 + 1700021P04Rik lincRNA lincRNA MGP_NODShiLtJ_T0050854.1 MGP_NODShiLtJ_G0024709.1 mouse_genomes_project 19 9228203 9240016 + MGP_NODShiLtJ_P0050854 Ms4a6c protein_coding protein_coding MGP_NODShiLtJ_T0050855.1 MGP_NODShiLtJ_G0024709.1 mouse_genomes_project 19 9228262 9231562 + Ms4a6c protein_coding retained_intron MGP_NODShiLtJ_T0050369.1 MGP_NODShiLtJ_G0024573.1 mouse_genomes_project 19 3140565 3141318 + MGP_NODShiLtJ_P0050369 Tmem262 protein_coding protein_coding MGP_NODShiLtJ_T0050370.1 MGP_NODShiLtJ_G0024573.1 mouse_genomes_project 19 3140565 3141321 + MGP_NODShiLtJ_P0050370 Tmem262 protein_coding protein_coding MGP_NODShiLtJ_T0050707.1 MGP_NODShiLtJ_G0024651.1 mouse_genomes_project 19 6318170 6326558 + MGP_NODShiLtJ_P0050707 B3gat3 protein_coding protein_coding MGP_NODShiLtJ_T0050705.1 MGP_NODShiLtJ_G0024650.1 mouse_genomes_project 19 6294949 6314532 + MGP_NODShiLtJ_P0050705 Ganab protein_coding protein_coding MGP_NODShiLtJ_T0050706.1 MGP_NODShiLtJ_G0024650.1 mouse_genomes_project 19 6294981 6314538 + MGP_NODShiLtJ_P0050706 Ganab protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050846.1 MGP_NODShiLtJ_G0024707.1 mouse_genomes_project 19 9134556 9165800 + MGP_NODShiLtJ_P0050846 Ms4a4c protein_coding protein_coding MGP_NODShiLtJ_T0051512.1 MGP_NODShiLtJ_G0024982.1 mouse_genomes_project 19 44703930 44722640 - MGP_NODShiLtJ_P0051512 Loxl4 protein_coding protein_coding MGP_NODShiLtJ_T0051513.1 MGP_NODShiLtJ_G0024982.1 mouse_genomes_project 19 44705054 44722640 - MGP_NODShiLtJ_P0051513 Loxl4 protein_coding protein_coding MGP_NODShiLtJ_T0051514.1 MGP_NODShiLtJ_G0024982.1 mouse_genomes_project 19 44705282 44718457 - MGP_NODShiLtJ_P0051514 Loxl4 protein_coding protein_coding MGP_NODShiLtJ_T0051515.1 MGP_NODShiLtJ_G0024982.1 mouse_genomes_project 19 44711501 44713280 - Loxl4 protein_coding processed_transcript MGP_NODShiLtJ_T0051516.1 MGP_NODShiLtJ_G0024982.1 mouse_genomes_project 19 44717555 44722599 - MGP_NODShiLtJ_P0051516 Loxl4 protein_coding protein_coding MGP_NODShiLtJ_T0050038.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 870394 870910 - Ndufv1 protein_coding retained_intron MGP_NODShiLtJ_T0050039.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 870395 875514 - MGP_NODShiLtJ_P0050039 Ndufv1 protein_coding protein_coding MGP_NODShiLtJ_T0050040.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 870453 875565 - MGP_NODShiLtJ_P0050040 Ndufv1 protein_coding protein_coding MGP_NODShiLtJ_T0050041.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 871186 872739 - Ndufv1 protein_coding retained_intron MGP_NODShiLtJ_T0050042.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 871256 872032 - Ndufv1 protein_coding retained_intron MGP_NODShiLtJ_T0050043.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 871644 875596 - Ndufv1 protein_coding retained_intron MGP_NODShiLtJ_T0050044.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 872258 875600 - MGP_NODShiLtJ_P0050044 Ndufv1 protein_coding protein_coding MGP_NODShiLtJ_T0050045.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 872309 875557 - MGP_NODShiLtJ_P0050045 Ndufv1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050046.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 872353 875651 - MGP_NODShiLtJ_P0050046 Ndufv1 protein_coding protein_coding MGP_NODShiLtJ_T0050047.1 MGP_NODShiLtJ_G0024471.1 mouse_genomes_project 19 872892 875553 - Ndufv1 protein_coding retained_intron MGP_NODShiLtJ_T0051588.1 MGP_NODShiLtJ_G0025008.1 mouse_genomes_project 19 46833615 46844074 - MGP_NODShiLtJ_P0051588 Gm20538 protein_coding protein_coding MGP_NODShiLtJ_T0051273.1 MGP_NODShiLtJ_G0024899.1 mouse_genomes_project 19 35799736 35885777 - MGP_NODShiLtJ_P0051273 Slc16a12 protein_coding protein_coding MGP_NODShiLtJ_T0051784.1 MGP_NODShiLtJ_G0025072.1 mouse_genomes_project 19 50624612 50733510 + MGP_NODShiLtJ_P0051784 Cfap58 protein_coding protein_coding MGP_NODShiLtJ_T0051332.1 MGP_NODShiLtJ_G0024919.1 mouse_genomes_project 19 39531492 39683011 - MGP_NODShiLtJ_P0051332 Myof protein_coding protein_coding MGP_NODShiLtJ_T0051333.1 MGP_NODShiLtJ_G0024919.1 mouse_genomes_project 19 39531492 39683011 - MGP_NODShiLtJ_P0051333 Myof protein_coding protein_coding MGP_NODShiLtJ_T0097789.1 MGP_NODShiLtJ_G0036201.1 mouse_genomes_project 19 11053537 11054054 - pseudogene pseudogene MGP_NODShiLtJ_T0051113.1 MGP_NODShiLtJ_G0024839.1 mouse_genomes_project 19 27598562 27613182 + MGP_NODShiLtJ_P0051113 Kcnv2 protein_coding protein_coding MGP_NODShiLtJ_T0051567.1 MGP_NODShiLtJ_G0024998.1 mouse_genomes_project 19 46325922 46362370 - MGP_NODShiLtJ_P0051567 Chuk protein_coding protein_coding MGP_NODShiLtJ_T0051568.1 MGP_NODShiLtJ_G0024998.1 mouse_genomes_project 19 46325923 46362367 - MGP_NODShiLtJ_P0051568 Chuk protein_coding protein_coding MGP_NODShiLtJ_T0051569.1 MGP_NODShiLtJ_G0024998.1 mouse_genomes_project 19 46326960 46328492 - Chuk protein_coding retained_intron MGP_NODShiLtJ_T0051570.1 MGP_NODShiLtJ_G0024998.1 mouse_genomes_project 19 46330590 46337727 - Chuk protein_coding retained_intron MGP_NODShiLtJ_T0051571.1 MGP_NODShiLtJ_G0024998.1 mouse_genomes_project 19 46331623 46332616 - Chuk protein_coding retained_intron MGP_NODShiLtJ_T0051572.1 MGP_NODShiLtJ_G0024998.1 mouse_genomes_project 19 46334752 46362359 - Chuk protein_coding retained_intron MGP_NODShiLtJ_T0051573.1 MGP_NODShiLtJ_G0024998.1 mouse_genomes_project 19 46350927 46362172 - Chuk protein_coding retained_intron MGP_NODShiLtJ_T0050941.1 MGP_NODShiLtJ_G0024756.1 mouse_genomes_project 19 10886373 10887321 + MGP_NODShiLtJ_P0050941 Olfr1449 protein_coding protein_coding MGP_NODShiLtJ_T0051264.1 MGP_NODShiLtJ_G0024893.1 mouse_genomes_project 19 35642985 35669556 + MGP_NODShiLtJ_P0051264 Ifit2 protein_coding protein_coding MGP_NODShiLtJ_T0051265.1 MGP_NODShiLtJ_G0024893.1 mouse_genomes_project 19 35643001 35672783 + MGP_NODShiLtJ_P0051265 Ifit2 protein_coding protein_coding MGP_NODShiLtJ_T0000992.1 MGP_NODShiLtJ_G0000918.1 mouse_genomes_project 19 1687520 1690589 - TEC TEC MGP_NODShiLtJ_T0050563.1 MGP_NODShiLtJ_G0024617.1 mouse_genomes_project 19 4446218 4449038 + MGP_NODShiLtJ_P0050563 Rcor2 protein_coding protein_coding MGP_NODShiLtJ_T0050564.1 MGP_NODShiLtJ_G0024617.1 mouse_genomes_project 19 4447855 4454125 + MGP_NODShiLtJ_P0050564 Rcor2 protein_coding protein_coding MGP_NODShiLtJ_T0050565.1 MGP_NODShiLtJ_G0024617.1 mouse_genomes_project 19 4449845 4450663 + Rcor2 protein_coding retained_intron MGP_NODShiLtJ_T0050586.1 MGP_NODShiLtJ_G0024620.1 mouse_genomes_project 19 4616901 4625179 + MGP_NODShiLtJ_P0050586 2700081O15Rik protein_coding protein_coding MGP_NODShiLtJ_T0050587.1 MGP_NODShiLtJ_G0024620.1 mouse_genomes_project 19 4617993 4620363 + 2700081O15Rik protein_coding retained_intron MGP_NODShiLtJ_T0050588.1 MGP_NODShiLtJ_G0024620.1 mouse_genomes_project 19 4619366 4622613 + MGP_NODShiLtJ_P0050588 2700081O15Rik protein_coding protein_coding MGP_NODShiLtJ_T0050589.1 MGP_NODShiLtJ_G0024620.1 mouse_genomes_project 19 4619685 4621947 + MGP_NODShiLtJ_P0050589 2700081O15Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050590.1 MGP_NODShiLtJ_G0024620.1 mouse_genomes_project 19 4619695 4621599 + MGP_NODShiLtJ_P0050590 2700081O15Rik protein_coding protein_coding MGP_NODShiLtJ_T0050591.1 MGP_NODShiLtJ_G0024620.1 mouse_genomes_project 19 4620302 4624815 + 2700081O15Rik protein_coding retained_intron MGP_NODShiLtJ_T0051622.1 MGP_NODShiLtJ_G0025021.1 mouse_genomes_project 19 47579743 47582880 - MGP_NODShiLtJ_P0051622 Lbx1 protein_coding protein_coding MGP_NODShiLtJ_T0050611.1 MGP_NODShiLtJ_G0024627.1 mouse_genomes_project 19 5005941 5027886 - MGP_NODShiLtJ_P0050611 Slc22a26 protein_coding protein_coding MGP_NODShiLtJ_T0050612.1 MGP_NODShiLtJ_G0024627.1 mouse_genomes_project 19 5006880 5027975 - MGP_NODShiLtJ_P0050612 Slc22a26 protein_coding protein_coding MGP_NODShiLtJ_T0050308.1 MGP_NODShiLtJ_G0024557.1 mouse_genomes_project 19 2781249 2794211 - MGP_NODShiLtJ_P0050308 Scyl1 protein_coding protein_coding MGP_NODShiLtJ_T0051149.1 MGP_NODShiLtJ_G0024849.1 mouse_genomes_project 19 29755612 29826431 + MGP_NODShiLtJ_P0051149 Jak2 protein_coding protein_coding MGP_NODShiLtJ_T0051150.1 MGP_NODShiLtJ_G0024849.1 mouse_genomes_project 19 29755612 29826431 + MGP_NODShiLtJ_P0051150 Jak2 protein_coding protein_coding MGP_NODShiLtJ_T0051504.1 MGP_NODShiLtJ_G0024979.1 mouse_genomes_project 19 44346718 44373290 + MGP_NODShiLtJ_P0051504 Golga7b protein_coding protein_coding MGP_NODShiLtJ_T0051505.1 MGP_NODShiLtJ_G0024979.1 mouse_genomes_project 19 44357289 44373290 + MGP_NODShiLtJ_P0051505 Golga7b protein_coding protein_coding MGP_NODShiLtJ_T0050078.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1029284 1035674 + MGP_NODShiLtJ_P0050078 Coro1b protein_coding protein_coding MGP_NODShiLtJ_T0050079.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1029284 1031171 + MGP_NODShiLtJ_P0050079 Coro1b protein_coding protein_coding MGP_NODShiLtJ_T0050080.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1029293 1030221 + Coro1b protein_coding retained_intron MGP_NODShiLtJ_T0050081.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1029297 1030301 + Coro1b protein_coding retained_intron MGP_NODShiLtJ_T0050082.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1029326 1032166 + Coro1b protein_coding processed_transcript MGP_NODShiLtJ_T0050083.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1029329 1030920 + Coro1b protein_coding retained_intron MGP_NODShiLtJ_T0050084.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1031209 1034447 + Coro1b protein_coding retained_intron MGP_NODShiLtJ_T0050085.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1032036 1035083 + Coro1b protein_coding retained_intron MGP_NODShiLtJ_T0050086.1 MGP_NODShiLtJ_G0024480.1 mouse_genomes_project 19 1032246 1035300 + Coro1b protein_coding retained_intron MGP_NODShiLtJ_T0050909.1 MGP_NODShiLtJ_G0024739.1 mouse_genomes_project 19 10298949 10303155 + MGP_NODShiLtJ_P0050909 Pfpl protein_coding protein_coding MGP_NODShiLtJ_T0013262.1 MGP_NODShiLtJ_G0011370.1 mouse_genomes_project 19 14036934 14037206 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010183.1 MGP_NODShiLtJ_G0008316.1 mouse_genomes_project 19 1100973 1101060 - Gm26115 miRNA miRNA MGP_NODShiLtJ_T0100317.1 MGP_NODShiLtJ_G0038711.1 mouse_genomes_project 19 6102338 6102405 + Gm23246 snoRNA snoRNA MGP_NODShiLtJ_T0099069.1 MGP_NODShiLtJ_G0037463.1 mouse_genomes_project 19 17723181 17723323 + Gm23238 snRNA snRNA MGP_NODShiLtJ_T0051959.1 MGP_NODShiLtJ_G0025127.1 mouse_genomes_project 19 64103418 64148729 - MGP_NODShiLtJ_P0051959 Rab11fip2 protein_coding protein_coding MGP_NODShiLtJ_T0051960.1 MGP_NODShiLtJ_G0025127.1 mouse_genomes_project 19 64104228 64148440 - MGP_NODShiLtJ_P0051960 Rab11fip2 protein_coding protein_coding MGP_NODShiLtJ_T0051961.1 MGP_NODShiLtJ_G0025127.1 mouse_genomes_project 19 64107448 64148076 - MGP_NODShiLtJ_P0051961 Rab11fip2 protein_coding protein_coding MGP_NODShiLtJ_T0051338.1 MGP_NODShiLtJ_G0024922.1 mouse_genomes_project 19 39763291 39772934 - MGP_NODShiLtJ_P0051338 Rbp4 protein_coding protein_coding MGP_NODShiLtJ_T0051339.1 MGP_NODShiLtJ_G0024922.1 mouse_genomes_project 19 39763291 39771384 - MGP_NODShiLtJ_P0051339 Rbp4 protein_coding protein_coding MGP_NODShiLtJ_T0003820.1 MGP_NODShiLtJ_G0003414.1 mouse_genomes_project 19 50169826 50173402 + Gm19557 antisense antisense MGP_NODShiLtJ_T0050226.1 MGP_NODShiLtJ_G0024533.1 mouse_genomes_project 19 2364523 2368874 - MGP_NODShiLtJ_P0050226 Tsga10ip protein_coding protein_coding MGP_NODShiLtJ_T0050829.1 MGP_NODShiLtJ_G0024702.1 mouse_genomes_project 19 8957162 8973787 - MGP_NODShiLtJ_P0050829 Ms4a1 protein_coding protein_coding MGP_NODShiLtJ_T0050830.1 MGP_NODShiLtJ_G0024702.1 mouse_genomes_project 19 8958364 8962177 - Ms4a1 protein_coding retained_intron MGP_NODShiLtJ_T0050831.1 MGP_NODShiLtJ_G0024702.1 mouse_genomes_project 19 8959152 8966309 - MGP_NODShiLtJ_P0050831 Ms4a1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050832.1 MGP_NODShiLtJ_G0024702.1 mouse_genomes_project 19 8961482 8973691 - Ms4a1 protein_coding retained_intron MGP_NODShiLtJ_T0010186.1 MGP_NODShiLtJ_G0008319.1 mouse_genomes_project 19 2158465 2158559 - Gm27468 miRNA miRNA MGP_NODShiLtJ_T0050022.1 MGP_NODShiLtJ_G0024464.1 mouse_genomes_project 19 781462 798881 + MGP_NODShiLtJ_P0050022 Unc93b1 protein_coding protein_coding MGP_NODShiLtJ_T0050023.1 MGP_NODShiLtJ_G0024464.1 mouse_genomes_project 19 781502 783019 + Unc93b1 protein_coding retained_intron MGP_NODShiLtJ_T0050024.1 MGP_NODShiLtJ_G0024464.1 mouse_genomes_project 19 781533 798884 + MGP_NODShiLtJ_P0050024 Unc93b1 protein_coding protein_coding MGP_NODShiLtJ_T0050025.1 MGP_NODShiLtJ_G0024464.1 mouse_genomes_project 19 791982 798881 + Unc93b1 protein_coding retained_intron MGP_NODShiLtJ_T0011364.1 MGP_NODShiLtJ_G0009497.1 mouse_genomes_project 19 6052678 6053007 - Gm22820 misc_RNA misc_RNA MGP_NODShiLtJ_T0051603.1 MGP_NODShiLtJ_G0025012.1 mouse_genomes_project 19 47257195 47314943 + MGP_NODShiLtJ_P0051603 Fam178a protein_coding protein_coding MGP_NODShiLtJ_T0051378.1 MGP_NODShiLtJ_G0024937.1 mouse_genomes_project 19 41386990 41438519 - MGP_NODShiLtJ_P0051378 protein_coding protein_coding MGP_NODShiLtJ_T0051065.1 MGP_NODShiLtJ_G0024825.1 mouse_genomes_project 19 24268332 24428419 - MGP_NODShiLtJ_P0051065 Pip5k1b protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051066.1 MGP_NODShiLtJ_G0024825.1 mouse_genomes_project 19 24418846 24542546 - Pip5k1b protein_coding processed_transcript MGP_NODShiLtJ_T0051583.1 MGP_NODShiLtJ_G0025005.1 mouse_genomes_project 19 46666066 46679325 - MGP_NODShiLtJ_P0051583 Scd1 protein_coding protein_coding MGP_NODShiLtJ_T0050566.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4454286 4527800 - MGP_NODShiLtJ_P0050566 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050567.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4454289 4528397 - MGP_NODShiLtJ_P0050567 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050568.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4455626 4528377 - MGP_NODShiLtJ_P0050568 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050569.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4455652 4527771 - MGP_NODShiLtJ_P0050569 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050570.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4455742 4461944 - MGP_NODShiLtJ_P0050570 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050571.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4455742 4528382 - MGP_NODShiLtJ_P0050571 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050572.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4455745 4456988 - Mark2 protein_coding retained_intron MGP_NODShiLtJ_T0050573.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4455983 4527800 - MGP_NODShiLtJ_P0050573 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050574.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4456173 4461959 - MGP_NODShiLtJ_P0050574 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050575.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4456338 4462072 - MGP_NODShiLtJ_P0050575 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050576.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4457395 4462411 - MGP_NODShiLtJ_P0050576 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050577.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4458053 4460835 - MGP_NODShiLtJ_P0050577 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050578.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4459930 4462004 - MGP_NODShiLtJ_P0050578 Mark2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050579.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4462030 4463672 - Mark2 protein_coding retained_intron MGP_NODShiLtJ_T0050580.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4463650 4466257 - Mark2 protein_coding retained_intron MGP_NODShiLtJ_T0050581.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4464713 4528438 - MGP_NODShiLtJ_P0050581 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050582.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4466230 4528182 - MGP_NODShiLtJ_P0050582 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050583.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4469221 4528220 - MGP_NODShiLtJ_P0050583 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0050584.1 MGP_NODShiLtJ_G0024618.1 mouse_genomes_project 19 4469550 4528390 - MGP_NODShiLtJ_P0050584 Mark2 protein_coding protein_coding MGP_NODShiLtJ_T0051461.1 MGP_NODShiLtJ_G0024967.1 mouse_genomes_project 19 44000835 44012773 + MGP_NODShiLtJ_P0051461 Zdhhc16 protein_coding protein_coding MGP_NODShiLtJ_T0051462.1 MGP_NODShiLtJ_G0024967.1 mouse_genomes_project 19 44000866 44012374 + MGP_NODShiLtJ_P0051462 Zdhhc16 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051296.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38341162 38407210 + MGP_NODShiLtJ_P0051296 Tnks2 protein_coding protein_coding MGP_NODShiLtJ_T0051297.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38341334 38366985 + Tnks2 protein_coding processed_transcript MGP_NODShiLtJ_T0051298.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38358456 38366060 + Tnks2 protein_coding retained_intron MGP_NODShiLtJ_T0051299.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38369905 38374728 + Tnks2 protein_coding retained_intron MGP_NODShiLtJ_T0051300.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38370288 38386279 + MGP_NODShiLtJ_P0051300 Tnks2 protein_coding protein_coding MGP_NODShiLtJ_T0051301.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38371501 38379440 + MGP_NODShiLtJ_P0051301 Tnks2 protein_coding protein_coding MGP_NODShiLtJ_T0051302.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38385566 38397856 + MGP_NODShiLtJ_P0051302 Tnks2 protein_coding protein_coding MGP_NODShiLtJ_T0051303.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38392286 38396853 + Tnks2 protein_coding retained_intron MGP_NODShiLtJ_T0051304.1 MGP_NODShiLtJ_G0024908.1 mouse_genomes_project 19 38394344 38401147 + Tnks2 protein_coding retained_intron MGP_NODShiLtJ_T0007001.1 MGP_NODShiLtJ_G0005744.1 mouse_genomes_project 19 2858991 2879771 - Neat1 lincRNA lincRNA MGP_NODShiLtJ_T0007002.1 MGP_NODShiLtJ_G0005744.1 mouse_genomes_project 19 2876599 2879769 - Neat1 lincRNA lincRNA MGP_NODShiLtJ_T0007003.1 MGP_NODShiLtJ_G0005744.1 mouse_genomes_project 19 2877973 2879552 - Neat1 lincRNA lincRNA MGP_NODShiLtJ_T0051762.1 MGP_NODShiLtJ_G0025066.1 mouse_genomes_project 19 50247630 50310854 + MGP_NODShiLtJ_P0051762 Slk protein_coding protein_coding MGP_NODShiLtJ_T0051763.1 MGP_NODShiLtJ_G0025066.1 mouse_genomes_project 19 50247971 50307114 + MGP_NODShiLtJ_P0051763 Slk protein_coding protein_coding MGP_NODShiLtJ_T0051764.1 MGP_NODShiLtJ_G0025066.1 mouse_genomes_project 19 50282621 50287283 + Slk protein_coding retained_intron MGP_NODShiLtJ_T0051765.1 MGP_NODShiLtJ_G0025066.1 mouse_genomes_project 19 50284612 50287783 + Slk protein_coding retained_intron MGP_NODShiLtJ_T0051766.1 MGP_NODShiLtJ_G0025066.1 mouse_genomes_project 19 50299788 50301113 + Slk protein_coding retained_intron MGP_NODShiLtJ_T0050197.1 MGP_NODShiLtJ_G0024518.1 mouse_genomes_project 19 1997688 2003951 + MGP_NODShiLtJ_P0050197 Rin1 protein_coding protein_coding MGP_NODShiLtJ_T0050198.1 MGP_NODShiLtJ_G0024518.1 mouse_genomes_project 19 1997739 2003960 + MGP_NODShiLtJ_P0050198 Rin1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0007046.1 MGP_NODShiLtJ_G0005776.1 mouse_genomes_project 19 48498405 48516935 + 4930505N22Rik lincRNA lincRNA MGP_NODShiLtJ_T0000994.1 MGP_NODShiLtJ_G0000920.1 mouse_genomes_project 19 9378561 9380093 - TEC TEC MGP_NODShiLtJ_T0051396.1 MGP_NODShiLtJ_G0024945.1 mouse_genomes_project 19 42193526 42246452 - MGP_NODShiLtJ_P0051396 Pdlim1 protein_coding protein_coding MGP_NODShiLtJ_T0051397.1 MGP_NODShiLtJ_G0024945.1 mouse_genomes_project 19 42194716 42195710 - Pdlim1 protein_coding retained_intron MGP_NODShiLtJ_T0051398.1 MGP_NODShiLtJ_G0024945.1 mouse_genomes_project 19 42194876 42203125 - Pdlim1 protein_coding retained_intron MGP_NODShiLtJ_T0051399.1 MGP_NODShiLtJ_G0024945.1 mouse_genomes_project 19 42202911 42246678 - MGP_NODShiLtJ_P0051399 Pdlim1 protein_coding protein_coding MGP_NODShiLtJ_T0051400.1 MGP_NODShiLtJ_G0024945.1 mouse_genomes_project 19 42219430 42246452 - Pdlim1 protein_coding retained_intron MGP_NODShiLtJ_T0051458.1 MGP_NODShiLtJ_G0024965.1 mouse_genomes_project 19 43975965 43984777 + MGP_NODShiLtJ_P0051458 Pgam1 protein_coding protein_coding MGP_NODShiLtJ_T0007041.1 MGP_NODShiLtJ_G0005773.1 mouse_genomes_project 19 47667625 47668573 - Gm29593 lincRNA lincRNA MGP_NODShiLtJ_T0051625.1 MGP_NODShiLtJ_G0025023.1 mouse_genomes_project 19 47949293 47957176 - MGP_NODShiLtJ_P0051625 Poll protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051322.1 MGP_NODShiLtJ_G0024913.1 mouse_genomes_project 19 38830545 38925996 - MGP_NODShiLtJ_P0051322 Ide protein_coding protein_coding MGP_NODShiLtJ_T0051323.1 MGP_NODShiLtJ_G0024913.1 mouse_genomes_project 19 38832242 38866870 - Ide protein_coding processed_transcript MGP_NODShiLtJ_T0051324.1 MGP_NODShiLtJ_G0024913.1 mouse_genomes_project 19 38842367 38852667 - Ide protein_coding retained_intron MGP_NODShiLtJ_T0051325.1 MGP_NODShiLtJ_G0024913.1 mouse_genomes_project 19 38862824 38873051 - Ide protein_coding processed_transcript MGP_NODShiLtJ_T0051326.1 MGP_NODShiLtJ_G0024913.1 mouse_genomes_project 19 38863128 38899641 - Ide protein_coding retained_intron MGP_NODShiLtJ_T0050205.1 MGP_NODShiLtJ_G0024521.1 mouse_genomes_project 19 2037255 2041556 + MGP_NODShiLtJ_P0050205 Yif1a protein_coding protein_coding MGP_NODShiLtJ_T0051541.1 MGP_NODShiLtJ_G0024991.1 mouse_genomes_project 19 45953942 45978913 - MGP_NODShiLtJ_P0051541 Cox15 protein_coding protein_coding MGP_NODShiLtJ_T0051542.1 MGP_NODShiLtJ_G0024991.1 mouse_genomes_project 19 45959562 45961658 - Cox15 protein_coding retained_intron MGP_NODShiLtJ_T0007039.1 MGP_NODShiLtJ_G0005772.1 mouse_genomes_project 19 47654801 47667337 - Gm29595 lincRNA lincRNA MGP_NODShiLtJ_T0007040.1 MGP_NODShiLtJ_G0005772.1 mouse_genomes_project 19 47654810 47657306 - Gm29595 lincRNA lincRNA MGP_NODShiLtJ_T0013280.1 MGP_NODShiLtJ_G0011388.1 mouse_genomes_project 19 55159811 55160189 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0010229.1 MGP_NODShiLtJ_G0008362.1 mouse_genomes_project 19 63045693 63045780 - Mir3086 miRNA miRNA MGP_NODShiLtJ_T0050885.1 MGP_NODShiLtJ_G0024718.1 mouse_genomes_project 19 9512849 9528948 + MGP_NODShiLtJ_P0050885 Oosp3 protein_coding protein_coding MGP_NODShiLtJ_T0050886.1 MGP_NODShiLtJ_G0024718.1 mouse_genomes_project 19 9512872 9528964 + MGP_NODShiLtJ_P0050886 Oosp3 protein_coding protein_coding MGP_NODShiLtJ_T0051770.1 MGP_NODShiLtJ_G0025068.1 mouse_genomes_project 19 50399213 50404021 + MGP_NODShiLtJ_P0051770 Sfr1 protein_coding protein_coding MGP_NODShiLtJ_T0051836.1 MGP_NODShiLtJ_G0025095.1 mouse_genomes_project 19 59101500 59119793 - MGP_NODShiLtJ_P0051836 Zdhhc6 protein_coding protein_coding MGP_NODShiLtJ_T0051837.1 MGP_NODShiLtJ_G0025095.1 mouse_genomes_project 19 59101984 59119770 - MGP_NODShiLtJ_P0051837 Zdhhc6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051231.1 MGP_NODShiLtJ_G0024874.1 mouse_genomes_project 19 33662818 33742669 + MGP_NODShiLtJ_P0051231 Pten protein_coding protein_coding MGP_NODShiLtJ_T0051232.1 MGP_NODShiLtJ_G0024874.1 mouse_genomes_project 19 33662916 33712629 + Pten protein_coding retained_intron MGP_NODShiLtJ_T0051233.1 MGP_NODShiLtJ_G0024874.1 mouse_genomes_project 19 33720995 33734496 + Pten protein_coding retained_intron MGP_NODShiLtJ_T0050195.1 MGP_NODShiLtJ_G0024516.1 mouse_genomes_project 19 1984855 1987163 + MGP_NODShiLtJ_P0050195 B4gat1 protein_coding protein_coding MGP_NODShiLtJ_T0013254.1 MGP_NODShiLtJ_G0011362.1 mouse_genomes_project 19 4931621 4932789 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050672.1 MGP_NODShiLtJ_G0024639.1 mouse_genomes_project 19 6189508 6191833 + MGP_NODShiLtJ_P0050672 Zbtb3 protein_coding protein_coding MGP_NODShiLtJ_T0051061.1 MGP_NODShiLtJ_G0024824.1 mouse_genomes_project 19 24223534 24252744 - MGP_NODShiLtJ_P0051061 Fxn protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051062.1 MGP_NODShiLtJ_G0024824.1 mouse_genomes_project 19 24226046 24252784 - MGP_NODShiLtJ_P0051062 Fxn protein_coding protein_coding MGP_NODShiLtJ_T0051063.1 MGP_NODShiLtJ_G0024824.1 mouse_genomes_project 19 24226094 24252747 - MGP_NODShiLtJ_P0051063 Fxn protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051064.1 MGP_NODShiLtJ_G0024824.1 mouse_genomes_project 19 24228079 24250359 - Fxn protein_coding retained_intron MGP_NODShiLtJ_T0051388.1 MGP_NODShiLtJ_G0024942.1 mouse_genomes_project 19 41921811 41970502 - MGP_NODShiLtJ_P0051388 Cyp2c54 protein_coding protein_coding MGP_NODShiLtJ_T0050957.1 MGP_NODShiLtJ_G0024772.1 mouse_genomes_project 19 11608201 11609109 - MGP_NODShiLtJ_P0050957 protein_coding protein_coding MGP_NODShiLtJ_T0050982.1 MGP_NODShiLtJ_G0024790.1 mouse_genomes_project 19 14803064 15061011 + MGP_NODShiLtJ_P0050982 Gnaq protein_coding protein_coding MGP_NODShiLtJ_T0050983.1 MGP_NODShiLtJ_G0024790.1 mouse_genomes_project 19 14803529 14993462 + Gnaq protein_coding retained_intron MGP_NODShiLtJ_T0050984.1 MGP_NODShiLtJ_G0024790.1 mouse_genomes_project 19 14887923 14994209 + Gnaq protein_coding processed_transcript MGP_NODShiLtJ_T0050328.1 MGP_NODShiLtJ_G0024563.1 mouse_genomes_project 19 2978012 3001624 - MGP_NODShiLtJ_P0050328 Pola2 protein_coding protein_coding MGP_NODShiLtJ_T0050329.1 MGP_NODShiLtJ_G0024563.1 mouse_genomes_project 19 2978574 3001624 - MGP_NODShiLtJ_P0050329 Pola2 protein_coding protein_coding MGP_NODShiLtJ_T0051530.1 MGP_NODShiLtJ_G0024987.1 mouse_genomes_project 19 45694240 45722747 - MGP_NODShiLtJ_P0051530 Got1 protein_coding protein_coding MGP_NODShiLtJ_T0051531.1 MGP_NODShiLtJ_G0024987.1 mouse_genomes_project 19 45694509 45712119 - MGP_NODShiLtJ_P0051531 Got1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051532.1 MGP_NODShiLtJ_G0024987.1 mouse_genomes_project 19 45694805 45700154 - Got1 protein_coding retained_intron MGP_NODShiLtJ_T0051533.1 MGP_NODShiLtJ_G0024987.1 mouse_genomes_project 19 45707524 45722627 - Got1 protein_coding processed_transcript MGP_NODShiLtJ_T0007038.1 MGP_NODShiLtJ_G0005771.1 mouse_genomes_project 19 46993384 46996287 - Gm26644 lincRNA lincRNA MGP_NODShiLtJ_T0013248.1 MGP_NODShiLtJ_G0011356.1 mouse_genomes_project 19 1016693 1016855 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050076.1 MGP_NODShiLtJ_G0024478.1 mouse_genomes_project 19 1016080 1020208 - MGP_NODShiLtJ_P0050076 Cabp4 protein_coding protein_coding MGP_NODShiLtJ_T0050900.1 MGP_NODShiLtJ_G0024730.1 mouse_genomes_project 19 10012503 10013551 - MGP_NODShiLtJ_P0050900 Olfr76 protein_coding protein_coding MGP_NODShiLtJ_T0051579.1 MGP_NODShiLtJ_G0025002.1 mouse_genomes_project 19 46459108 46502563 + MGP_NODShiLtJ_P0051579 Scd3 protein_coding protein_coding MGP_NODShiLtJ_T0050307.1 MGP_NODShiLtJ_G0024556.1 mouse_genomes_project 19 2763686 2781355 + MGP_NODShiLtJ_P0050307 Ltbp3 protein_coding protein_coding MGP_NODShiLtJ_T0051277.1 MGP_NODShiLtJ_G0024902.1 mouse_genomes_project 19 37334331 37458956 - MGP_NODShiLtJ_P0051277 Htr7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051278.1 MGP_NODShiLtJ_G0024902.1 mouse_genomes_project 19 37334331 37458956 - MGP_NODShiLtJ_P0051278 Htr7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051279.1 MGP_NODShiLtJ_G0024902.1 mouse_genomes_project 19 37334331 37458936 - MGP_NODShiLtJ_P0051279 Htr7 protein_coding protein_coding MGP_NODShiLtJ_T0051280.1 MGP_NODShiLtJ_G0024902.1 mouse_genomes_project 19 37334342 37458964 - MGP_NODShiLtJ_P0051280 Htr7 protein_coding protein_coding MGP_NODShiLtJ_T0051281.1 MGP_NODShiLtJ_G0024902.1 mouse_genomes_project 19 37335417 37459103 - MGP_NODShiLtJ_P0051281 Htr7 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051282.1 MGP_NODShiLtJ_G0024902.1 mouse_genomes_project 19 37335912 37458969 - MGP_NODShiLtJ_P0051282 Htr7 protein_coding protein_coding MGP_NODShiLtJ_T0051043.1 MGP_NODShiLtJ_G0024813.1 mouse_genomes_project 19 21472900 21558158 + MGP_NODShiLtJ_P0051043 Tmem2 protein_coding protein_coding MGP_NODShiLtJ_T0051044.1 MGP_NODShiLtJ_G0024813.1 mouse_genomes_project 19 21472900 21558158 + MGP_NODShiLtJ_P0051044 Tmem2 protein_coding protein_coding MGP_NODShiLtJ_T0051704.1 MGP_NODShiLtJ_G0025040.1 mouse_genomes_project 19 48858250 48860520 + MGP_NODShiLtJ_P0051704 Fbxl15 protein_coding protein_coding MGP_NODShiLtJ_T0051705.1 MGP_NODShiLtJ_G0025040.1 mouse_genomes_project 19 48858253 48860519 + MGP_NODShiLtJ_P0051705 Fbxl15 protein_coding protein_coding MGP_NODShiLtJ_T0050733.1 MGP_NODShiLtJ_G0024664.1 mouse_genomes_project 19 7621239 7635042 + MGP_NODShiLtJ_P0050733 Rab3il1 protein_coding protein_coding MGP_NODShiLtJ_T0050734.1 MGP_NODShiLtJ_G0024664.1 mouse_genomes_project 19 7624416 7642921 + MGP_NODShiLtJ_P0050734 Rab3il1 protein_coding protein_coding MGP_NODShiLtJ_T0050735.1 MGP_NODShiLtJ_G0024664.1 mouse_genomes_project 19 7624571 7642005 + MGP_NODShiLtJ_P0050735 Rab3il1 protein_coding protein_coding MGP_NODShiLtJ_T0050736.1 MGP_NODShiLtJ_G0024664.1 mouse_genomes_project 19 7639135 7641276 + Rab3il1 protein_coding retained_intron MGP_NODShiLtJ_T0051637.1 MGP_NODShiLtJ_G0025026.1 mouse_genomes_project 19 48153583 48159670 - MGP_NODShiLtJ_P0051637 Fgf8 protein_coding protein_coding MGP_NODShiLtJ_T0051638.1 MGP_NODShiLtJ_G0025026.1 mouse_genomes_project 19 48153598 48159711 - MGP_NODShiLtJ_P0051638 Fgf8 protein_coding protein_coding MGP_NODShiLtJ_T0051639.1 MGP_NODShiLtJ_G0025026.1 mouse_genomes_project 19 48153603 48159669 - MGP_NODShiLtJ_P0051639 Fgf8 protein_coding protein_coding MGP_NODShiLtJ_T0051640.1 MGP_NODShiLtJ_G0025026.1 mouse_genomes_project 19 48153721 48159654 - MGP_NODShiLtJ_P0051640 Fgf8 protein_coding protein_coding MGP_NODShiLtJ_T0051641.1 MGP_NODShiLtJ_G0025026.1 mouse_genomes_project 19 48153756 48159470 - MGP_NODShiLtJ_P0051641 Fgf8 protein_coding protein_coding MGP_NODShiLtJ_T0051642.1 MGP_NODShiLtJ_G0025026.1 mouse_genomes_project 19 48153775 48159470 - MGP_NODShiLtJ_P0051642 Fgf8 protein_coding protein_coding MGP_NODShiLtJ_T0051200.1 MGP_NODShiLtJ_G0024863.1 mouse_genomes_project 19 30661124 30741948 - MGP_NODShiLtJ_P0051200 Gldc protein_coding protein_coding MGP_NODShiLtJ_T0050904.1 MGP_NODShiLtJ_G0024734.1 mouse_genomes_project 19 10141187 10146291 + MGP_NODShiLtJ_P0050904 Olfr1434 protein_coding protein_coding MGP_NODShiLtJ_T0051711.1 MGP_NODShiLtJ_G0025043.1 mouse_genomes_project 19 48912878 48936054 - MGP_NODShiLtJ_P0051711 Actr1a protein_coding protein_coding MGP_NODShiLtJ_T0051964.1 MGP_NODShiLtJ_G0025130.1 mouse_genomes_project 19 64801152 64864927 - MGP_NODShiLtJ_P0051964 Cacul1 protein_coding protein_coding MGP_NODShiLtJ_T0051965.1 MGP_NODShiLtJ_G0025130.1 mouse_genomes_project 19 64801152 64864927 - MGP_NODShiLtJ_P0051965 Cacul1 protein_coding protein_coding MGP_NODShiLtJ_T0051966.1 MGP_NODShiLtJ_G0025130.1 mouse_genomes_project 19 64801152 64864927 - MGP_NODShiLtJ_P0051966 Cacul1 protein_coding protein_coding MGP_NODShiLtJ_T0050523.1 MGP_NODShiLtJ_G0024598.1 mouse_genomes_project 19 4045494 4057322 - MGP_NODShiLtJ_P0050523 Esrra protein_coding protein_coding MGP_NODShiLtJ_T0050524.1 MGP_NODShiLtJ_G0024598.1 mouse_genomes_project 19 4046969 4057275 - MGP_NODShiLtJ_P0050524 Esrra protein_coding protein_coding MGP_NODShiLtJ_T0050525.1 MGP_NODShiLtJ_G0024598.1 mouse_genomes_project 19 4047282 4057327 - Esrra protein_coding processed_transcript MGP_NODShiLtJ_T0050526.1 MGP_NODShiLtJ_G0024598.1 mouse_genomes_project 19 4055418 4057281 - Esrra protein_coding retained_intron MGP_NODShiLtJ_T0050527.1 MGP_NODShiLtJ_G0024598.1 mouse_genomes_project 19 4055592 4056565 - MGP_NODShiLtJ_P0050527 Esrra protein_coding protein_coding MGP_NODShiLtJ_T0101310.1 MGP_NODShiLtJ_G0039566.1 mouse_genomes_project 19 62818340 62820747 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101311.1 MGP_NODShiLtJ_G0039566.1 mouse_genomes_project 19 62818340 62818754 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101312.1 MGP_NODShiLtJ_G0039566.1 mouse_genomes_project 19 62818505 62835743 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101307.1 MGP_NODShiLtJ_G0039565.1 mouse_genomes_project 19 41021541 41053873 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0101308.1 MGP_NODShiLtJ_G0039565.1 mouse_genomes_project 19 41021571 41053830 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_NODShiLtJ_T0101309.1 MGP_NODShiLtJ_G0039565.1 mouse_genomes_project 19 41050617 41054121 + transcribed_unprocessed_pseudogene processed_transcript MGP_NODShiLtJ_T0017579.1 MGP_NODShiLtJ_G0015259.1 mouse_genomes_project 19 48794024 48797158 - Gm16726 processed_transcript processed_transcript MGP_NODShiLtJ_T0051075.1 MGP_NODShiLtJ_G0024831.1 mouse_genomes_project 19 25046999 25268355 + MGP_NODShiLtJ_P0051075 Dock8 protein_coding protein_coding MGP_NODShiLtJ_T0010191.1 MGP_NODShiLtJ_G0008324.1 mouse_genomes_project 19 3681249 3681375 + Gm26460 miRNA miRNA MGP_NODShiLtJ_T0097791.1 MGP_NODShiLtJ_G0036203.1 mouse_genomes_project 19 43883839 43884481 + pseudogene pseudogene MGP_NODShiLtJ_T0100319.1 MGP_NODShiLtJ_G0038713.1 mouse_genomes_project 19 6282962 6283110 - Snora57 snoRNA snoRNA MGP_NODShiLtJ_T0050943.1 MGP_NODShiLtJ_G0024758.1 mouse_genomes_project 19 10958204 10959137 + MGP_NODShiLtJ_P0050943 Olfr1451 protein_coding protein_coding MGP_NODShiLtJ_T0051875.1 MGP_NODShiLtJ_G0025101.1 mouse_genomes_project 19 60357117 60382252 + MGP_NODShiLtJ_P0051875 Plekhs1 protein_coding protein_coding MGP_NODShiLtJ_T0051876.1 MGP_NODShiLtJ_G0025101.1 mouse_genomes_project 19 60357117 60382252 + MGP_NODShiLtJ_P0051876 Plekhs1 protein_coding protein_coding MGP_NODShiLtJ_T0051877.1 MGP_NODShiLtJ_G0025101.1 mouse_genomes_project 19 60360050 60381372 + MGP_NODShiLtJ_P0051877 Plekhs1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050790.1 MGP_NODShiLtJ_G0024689.1 mouse_genomes_project 19 8547218 8558859 - MGP_NODShiLtJ_P0050790 Tmem109 protein_coding protein_coding MGP_NODShiLtJ_T0050791.1 MGP_NODShiLtJ_G0024689.1 mouse_genomes_project 19 8548405 8556926 - MGP_NODShiLtJ_P0050791 Tmem109 protein_coding protein_coding MGP_NODShiLtJ_T0050792.1 MGP_NODShiLtJ_G0024689.1 mouse_genomes_project 19 8548689 8551293 - Tmem109 protein_coding retained_intron MGP_NODShiLtJ_T0050793.1 MGP_NODShiLtJ_G0024689.1 mouse_genomes_project 19 8548744 8558859 - MGP_NODShiLtJ_P0050793 Tmem109 protein_coding protein_coding MGP_NODShiLtJ_T0050794.1 MGP_NODShiLtJ_G0024689.1 mouse_genomes_project 19 8550483 8558569 - Tmem109 protein_coding retained_intron MGP_NODShiLtJ_T0050795.1 MGP_NODShiLtJ_G0024689.1 mouse_genomes_project 19 8550797 8558589 - MGP_NODShiLtJ_P0050795 Tmem109 protein_coding protein_coding MGP_NODShiLtJ_T0050796.1 MGP_NODShiLtJ_G0024689.1 mouse_genomes_project 19 8550815 8558556 - MGP_NODShiLtJ_P0050796 Tmem109 protein_coding protein_coding MGP_NODShiLtJ_T0050811.1 MGP_NODShiLtJ_G0024694.1 mouse_genomes_project 19 8649670 8662048 - MGP_NODShiLtJ_P0050811 Ms4a10 protein_coding protein_coding MGP_NODShiLtJ_T0050812.1 MGP_NODShiLtJ_G0024694.1 mouse_genomes_project 19 8649674 8662023 - MGP_NODShiLtJ_P0050812 Ms4a10 protein_coding protein_coding MGP_NODShiLtJ_T0050813.1 MGP_NODShiLtJ_G0024694.1 mouse_genomes_project 19 8649677 8653234 - MGP_NODShiLtJ_P0050813 Ms4a10 protein_coding protein_coding MGP_NODShiLtJ_T0050932.1 MGP_NODShiLtJ_G0024749.1 mouse_genomes_project 19 10659284 10661257 - MGP_NODShiLtJ_P0050932 Cntf protein_coding protein_coding MGP_NODShiLtJ_T0003787.1 MGP_NODShiLtJ_G0003393.1 mouse_genomes_project 19 2394372 2405111 + 4930481A15Rik antisense antisense MGP_NODShiLtJ_T0003788.1 MGP_NODShiLtJ_G0003393.1 mouse_genomes_project 19 2394372 2405104 + 4930481A15Rik antisense antisense MGP_NODShiLtJ_T0003789.1 MGP_NODShiLtJ_G0003393.1 mouse_genomes_project 19 2394372 2405207 + 4930481A15Rik antisense antisense MGP_NODShiLtJ_T0003790.1 MGP_NODShiLtJ_G0003393.1 mouse_genomes_project 19 2394420 2410401 + 4930481A15Rik antisense antisense MGP_NODShiLtJ_T0050431.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3439897 3454369 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050432.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3439917 3441415 + MGP_NODShiLtJ_P0050432 Map4k2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050433.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3439922 3454372 + MGP_NODShiLtJ_P0050433 Map4k2 protein_coding protein_coding MGP_NODShiLtJ_T0050434.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3439953 3440755 + Map4k2 protein_coding processed_transcript MGP_NODShiLtJ_T0050435.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3439970 3454058 + MGP_NODShiLtJ_P0050435 Map4k2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050436.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3439978 3441633 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050437.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3439986 3444501 + MGP_NODShiLtJ_P0050437 Map4k2 protein_coding protein_coding MGP_NODShiLtJ_T0050438.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3440012 3452284 + MGP_NODShiLtJ_P0050438 Map4k2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050439.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3440032 3442282 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050440.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3440180 3442617 + Map4k2 protein_coding processed_transcript MGP_NODShiLtJ_T0050441.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3440211 3442280 + Map4k2 protein_coding processed_transcript MGP_NODShiLtJ_T0050442.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3440233 3442280 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050443.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3440537 3450646 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050444.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3441295 3441604 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050445.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3442274 3443406 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050446.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3444108 3445052 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050447.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3445307 3452597 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050448.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3445427 3450418 + Map4k2 protein_coding processed_transcript MGP_NODShiLtJ_T0050449.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3445450 3452595 + MGP_NODShiLtJ_P0050449 Map4k2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050450.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3449667 3450339 + Map4k2 protein_coding retained_intron MGP_NODShiLtJ_T0050451.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3451376 3454199 + Map4k2 protein_coding processed_transcript MGP_NODShiLtJ_T0050452.1 MGP_NODShiLtJ_G0024588.1 mouse_genomes_project 19 3451531 3452390 + Map4k2 protein_coding processed_transcript MGP_NODShiLtJ_T0050519.1 MGP_NODShiLtJ_G0024597.1 mouse_genomes_project 19 4044215 4045567 + MGP_NODShiLtJ_P0050519 Trmt112 protein_coding protein_coding MGP_NODShiLtJ_T0050520.1 MGP_NODShiLtJ_G0024597.1 mouse_genomes_project 19 4044264 4045546 + MGP_NODShiLtJ_P0050520 Trmt112 protein_coding protein_coding MGP_NODShiLtJ_T0050521.1 MGP_NODShiLtJ_G0024597.1 mouse_genomes_project 19 4044670 4045352 + Trmt112 protein_coding retained_intron MGP_NODShiLtJ_T0050522.1 MGP_NODShiLtJ_G0024597.1 mouse_genomes_project 19 4044681 4045546 + MGP_NODShiLtJ_P0050522 Trmt112 protein_coding protein_coding MGP_NODShiLtJ_T0050877.1 MGP_NODShiLtJ_G0024715.1 mouse_genomes_project 19 9423561 9439449 - MGP_NODShiLtJ_P0050877 Ms4a3 protein_coding protein_coding MGP_NODShiLtJ_T0050878.1 MGP_NODShiLtJ_G0024715.1 mouse_genomes_project 19 9423564 9439478 - MGP_NODShiLtJ_P0050878 Ms4a3 protein_coding protein_coding MGP_NODShiLtJ_T0050879.1 MGP_NODShiLtJ_G0024715.1 mouse_genomes_project 19 9425964 9439495 - Ms4a3 protein_coding retained_intron MGP_NODShiLtJ_T0051943.1 MGP_NODShiLtJ_G0025118.1 mouse_genomes_project 19 62911432 62920075 - MGP_NODShiLtJ_P0051943 1700019N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0051944.1 MGP_NODShiLtJ_G0025118.1 mouse_genomes_project 19 62911625 62918897 - MGP_NODShiLtJ_P0051944 1700019N19Rik protein_coding protein_coding MGP_NODShiLtJ_T0051146.1 MGP_NODShiLtJ_G0024847.1 mouse_genomes_project 19 29473748 29500887 - MGP_NODShiLtJ_P0051146 Ak3 protein_coding protein_coding MGP_NODShiLtJ_T0051147.1 MGP_NODShiLtJ_G0024847.1 mouse_genomes_project 19 29478816 29480160 - MGP_NODShiLtJ_P0051147 Ak3 protein_coding protein_coding MGP_NODShiLtJ_T0050953.1 MGP_NODShiLtJ_G0024768.1 mouse_genomes_project 19 11447934 11448867 + MGP_NODShiLtJ_P0050953 Olfr1466 protein_coding protein_coding MGP_NODShiLtJ_T0013274.1 MGP_NODShiLtJ_G0011382.1 mouse_genomes_project 19 30727173 30727551 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050907.1 MGP_NODShiLtJ_G0024737.1 mouse_genomes_project 19 10263758 10264706 + MGP_NODShiLtJ_P0050907 Olfr1440 protein_coding protein_coding MGP_NODShiLtJ_T0051684.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48675705 48816857 + MGP_NODShiLtJ_P0051684 Gbf1 protein_coding protein_coding MGP_NODShiLtJ_T0051685.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48675726 48785472 + Gbf1 protein_coding retained_intron MGP_NODShiLtJ_T0051686.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48675744 48797675 + Gbf1 protein_coding retained_intron MGP_NODShiLtJ_T0051687.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48675769 48775276 + Gbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0051688.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48775176 48816856 + MGP_NODShiLtJ_P0051688 Gbf1 protein_coding protein_coding MGP_NODShiLtJ_T0051689.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48783541 48789241 + MGP_NODShiLtJ_P0051689 Gbf1 protein_coding protein_coding MGP_NODShiLtJ_T0051691.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48798281 48800196 + Gbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0051692.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48799202 48802866 + Gbf1 protein_coding retained_intron MGP_NODShiLtJ_T0051693.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48810219 48811356 + Gbf1 protein_coding retained_intron MGP_NODShiLtJ_T0051694.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48810526 48814029 + MGP_NODShiLtJ_P0051694 Gbf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051695.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48810681 48813832 + Gbf1 protein_coding retained_intron MGP_NODShiLtJ_T0051696.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48813189 48814373 + Gbf1 protein_coding processed_transcript MGP_NODShiLtJ_T0051697.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48813347 48814287 + Gbf1 protein_coding retained_intron MGP_NODShiLtJ_T0051698.1 MGP_NODShiLtJ_G0025037.1 mouse_genomes_project 19 48814909 48816327 + Gbf1 protein_coding retained_intron MGP_NODShiLtJ_T0051344.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39940245 39992251 + MGP_NODShiLtJ_P0051344 Lgi1 protein_coding protein_coding MGP_NODShiLtJ_T0051345.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39940276 39988067 + MGP_NODShiLtJ_P0051345 Lgi1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051346.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39940286 39985928 + MGP_NODShiLtJ_P0051346 Lgi1 protein_coding protein_coding MGP_NODShiLtJ_T0051347.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39940355 39985927 + MGP_NODShiLtJ_P0051347 Lgi1 protein_coding protein_coding MGP_NODShiLtJ_T0051348.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39940369 39975918 + MGP_NODShiLtJ_P0051348 Lgi1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051349.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39940380 39985404 + MGP_NODShiLtJ_P0051349 Lgi1 protein_coding protein_coding MGP_NODShiLtJ_T0051350.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39940461 39941590 + Lgi1 protein_coding retained_intron MGP_NODShiLtJ_T0051351.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39940510 39944723 + Lgi1 protein_coding retained_intron MGP_NODShiLtJ_T0051352.1 MGP_NODShiLtJ_G0024925.1 mouse_genomes_project 19 39941085 39979214 + Lgi1 protein_coding retained_intron MGP_NODShiLtJ_T0007060.1 MGP_NODShiLtJ_G0005787.1 mouse_genomes_project 19 64374840 64395179 + E330013P04Rik lincRNA lincRNA MGP_NODShiLtJ_T0007061.1 MGP_NODShiLtJ_G0005787.1 mouse_genomes_project 19 64374869 64385044 + E330013P04Rik lincRNA lincRNA MGP_NODShiLtJ_T0007062.1 MGP_NODShiLtJ_G0005787.1 mouse_genomes_project 19 64383248 64389282 + E330013P04Rik lincRNA lincRNA MGP_NODShiLtJ_T0049971.1 MGP_NODShiLtJ_G0024457.1 mouse_genomes_project 19 376298 485773 - MGP_NODShiLtJ_P0049971 Lrp5 protein_coding protein_coding MGP_NODShiLtJ_T0049972.1 MGP_NODShiLtJ_G0024457.1 mouse_genomes_project 19 376304 485567 - MGP_NODShiLtJ_P0049972 Lrp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049973.1 MGP_NODShiLtJ_G0024457.1 mouse_genomes_project 19 376309 408637 - MGP_NODShiLtJ_P0049973 Lrp5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049974.1 MGP_NODShiLtJ_G0024457.1 mouse_genomes_project 19 414494 485570 - MGP_NODShiLtJ_P0049974 Lrp5 protein_coding protein_coding MGP_NODShiLtJ_T0051214.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32959083 33235556 - MGP_NODShiLtJ_P0051214 Sgms1 protein_coding protein_coding MGP_NODShiLtJ_T0051215.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32959086 33189305 - MGP_NODShiLtJ_P0051215 Sgms1 protein_coding protein_coding MGP_NODShiLtJ_T0051216.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32959835 33042636 - MGP_NODShiLtJ_P0051216 Sgms1 protein_coding protein_coding MGP_NODShiLtJ_T0051217.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32960501 33108059 - MGP_NODShiLtJ_P0051217 Sgms1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051218.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32960503 32996415 - MGP_NODShiLtJ_P0051218 Sgms1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051219.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32994447 33236753 - Sgms1 protein_coding retained_intron MGP_NODShiLtJ_T0051220.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32996252 33034542 - MGP_NODShiLtJ_P0051220 Sgms1 protein_coding protein_coding MGP_NODShiLtJ_T0051221.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32996349 33069884 - Sgms1 protein_coding processed_transcript MGP_NODShiLtJ_T0051222.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32996361 33156149 - Sgms1 protein_coding processed_transcript MGP_NODShiLtJ_T0051223.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 32996490 33108033 - Sgms1 protein_coding processed_transcript MGP_NODShiLtJ_T0051224.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 33050288 33079085 - Sgms1 protein_coding processed_transcript MGP_NODShiLtJ_T0051225.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 33052117 33121968 - Sgms1 protein_coding retained_intron MGP_NODShiLtJ_T0051226.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 33054848 33069898 - Sgms1 protein_coding retained_intron MGP_NODShiLtJ_T0051227.1 MGP_NODShiLtJ_G0024870.1 mouse_genomes_project 19 33121667 33235507 - Sgms1 protein_coding retained_intron MGP_NODShiLtJ_T0101778.1 MGP_NODShiLtJ_G0039946.1 mouse_genomes_project 19 9366026 9369708 + unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0051250.1 MGP_NODShiLtJ_G0024887.1 mouse_genomes_project 19 35204448 35237414 - MGP_NODShiLtJ_P0051250 Ankrd22 protein_coding protein_coding MGP_NODShiLtJ_T0051251.1 MGP_NODShiLtJ_G0024887.1 mouse_genomes_project 19 35204824 35230640 - Ankrd22 protein_coding processed_transcript MGP_NODShiLtJ_T0051252.1 MGP_NODShiLtJ_G0024887.1 mouse_genomes_project 19 35204824 35210588 - Ankrd22 protein_coding processed_transcript MGP_NODShiLtJ_T0051646.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48230648 48233450 - MGP_NODShiLtJ_P0051646 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051647.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48231494 48268483 - Kcnip2 protein_coding retained_intron MGP_NODShiLtJ_T0051648.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48231494 48268522 - MGP_NODShiLtJ_P0051648 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051649.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48231494 48268483 - MGP_NODShiLtJ_P0051649 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051650.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48232497 48264761 - MGP_NODShiLtJ_P0051650 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051651.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48232596 48268486 - MGP_NODShiLtJ_P0051651 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051652.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48232818 48239116 - MGP_NODShiLtJ_P0051652 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051653.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48232818 48268294 - MGP_NODShiLtJ_P0051653 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051654.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48233141 48268264 - MGP_NODShiLtJ_P0051654 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051655.1 MGP_NODShiLtJ_G0025029.1 mouse_genomes_project 19 48238315 48240455 - MGP_NODShiLtJ_P0051655 Kcnip2 protein_coding protein_coding MGP_NODShiLtJ_T0051151.1 MGP_NODShiLtJ_G0024850.1 mouse_genomes_project 19 29836695 29840671 - MGP_NODShiLtJ_P0051151 Insl6 protein_coding protein_coding MGP_NODShiLtJ_T0011365.1 MGP_NODShiLtJ_G0009498.1 mouse_genomes_project 19 15854694 15855101 - Gm27970 misc_RNA misc_RNA MGP_NODShiLtJ_T0050678.1 MGP_NODShiLtJ_G0024642.1 mouse_genomes_project 19 6224790 6227102 - MGP_NODShiLtJ_P0050678 Gng3 protein_coding protein_coding MGP_NODShiLtJ_T0051012.1 MGP_NODShiLtJ_G0024803.1 mouse_genomes_project 19 17935659 18008196 - MGP_NODShiLtJ_P0051012 Rorb protein_coding protein_coding MGP_NODShiLtJ_T0051013.1 MGP_NODShiLtJ_G0024803.1 mouse_genomes_project 19 17942877 18129699 - MGP_NODShiLtJ_P0051013 Rorb protein_coding protein_coding MGP_NODShiLtJ_T0051014.1 MGP_NODShiLtJ_G0024803.1 mouse_genomes_project 19 17982236 18008179 - Rorb protein_coding retained_intron MGP_NODShiLtJ_T0051015.1 MGP_NODShiLtJ_G0024803.1 mouse_genomes_project 19 17982254 18008190 - Rorb protein_coding retained_intron MGP_NODShiLtJ_T0051261.1 MGP_NODShiLtJ_G0024891.1 mouse_genomes_project 19 35558161 35559511 - MGP_NODShiLtJ_P0051261 Ch25h protein_coding protein_coding MGP_NODShiLtJ_T0017554.1 MGP_NODShiLtJ_G0015250.1 mouse_genomes_project 19 7823271 7827288 + Gm10143 processed_transcript processed_transcript MGP_NODShiLtJ_T0017555.1 MGP_NODShiLtJ_G0015250.1 mouse_genomes_project 19 7824092 7827286 + Gm10143 processed_transcript processed_transcript MGP_NODShiLtJ_T0051463.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44008637 44054078 - MGP_NODShiLtJ_P0051463 Mms19 protein_coding protein_coding MGP_NODShiLtJ_T0051464.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44008637 44054035 - MGP_NODShiLtJ_P0051464 Mms19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051465.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44012875 44054034 - MGP_NODShiLtJ_P0051465 Mms19 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051466.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44012882 44035287 - Mms19 protein_coding retained_intron MGP_NODShiLtJ_T0051467.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44012886 44042647 - MGP_NODShiLtJ_P0051467 Mms19 protein_coding protein_coding MGP_NODShiLtJ_T0051468.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44012888 44054057 - MGP_NODShiLtJ_P0051468 Mms19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051469.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44012888 44054038 - MGP_NODShiLtJ_P0051469 Mms19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051470.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44013054 44054053 - MGP_NODShiLtJ_P0051470 Mms19 protein_coding protein_coding MGP_NODShiLtJ_T0051471.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44013166 44025792 - MGP_NODShiLtJ_P0051471 Mms19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051472.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44013226 44014305 - Mms19 protein_coding retained_intron MGP_NODShiLtJ_T0051473.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44017466 44054060 - Mms19 protein_coding retained_intron MGP_NODShiLtJ_T0051474.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44017654 44024599 - MGP_NODShiLtJ_P0051474 Mms19 protein_coding protein_coding MGP_NODShiLtJ_T0051475.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44017839 44018907 - Mms19 protein_coding retained_intron MGP_NODShiLtJ_T0051476.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44018349 44054058 - MGP_NODShiLtJ_P0051476 Mms19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051477.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44020371 44021989 - Mms19 protein_coding retained_intron MGP_NODShiLtJ_T0051478.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44023751 44054051 - MGP_NODShiLtJ_P0051478 Mms19 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051479.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44025110 44025821 - Mms19 protein_coding retained_intron MGP_NODShiLtJ_T0051480.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44033448 44033776 - Mms19 protein_coding retained_intron MGP_NODShiLtJ_T0051481.1 MGP_NODShiLtJ_G0024968.1 mouse_genomes_project 19 44033656 44042666 - MGP_NODShiLtJ_P0051481 Mms19 protein_coding protein_coding MGP_NODShiLtJ_T0000993.1 MGP_NODShiLtJ_G0000919.1 mouse_genomes_project 19 2835522 2835975 + TEC TEC MGP_NODShiLtJ_T0051574.1 MGP_NODShiLtJ_G0024999.1 mouse_genomes_project 19 46363533 46392696 - MGP_NODShiLtJ_P0051574 Cwf19l1 protein_coding protein_coding MGP_NODShiLtJ_T0051534.1 MGP_NODShiLtJ_G0024988.1 mouse_genomes_project 19 45819485 45823059 + MGP_NODShiLtJ_P0051534 Nkx2-3 protein_coding protein_coding MGP_NODShiLtJ_T0010185.1 MGP_NODShiLtJ_G0008318.1 mouse_genomes_project 19 1544468 1544526 - Mir6986 miRNA miRNA MGP_NODShiLtJ_T0051447.1 MGP_NODShiLtJ_G0024961.1 mouse_genomes_project 19 43640294 43791650 - MGP_NODShiLtJ_P0051447 Slit1 protein_coding protein_coding MGP_NODShiLtJ_T0051448.1 MGP_NODShiLtJ_G0024961.1 mouse_genomes_project 19 43640296 43791823 - MGP_NODShiLtJ_P0051448 Slit1 protein_coding protein_coding MGP_NODShiLtJ_T0051449.1 MGP_NODShiLtJ_G0024961.1 mouse_genomes_project 19 43640488 43791650 - MGP_NODShiLtJ_P0051449 Slit1 protein_coding protein_coding MGP_NODShiLtJ_T0051450.1 MGP_NODShiLtJ_G0024961.1 mouse_genomes_project 19 43645351 43650309 - Slit1 protein_coding retained_intron MGP_NODShiLtJ_T0051451.1 MGP_NODShiLtJ_G0024961.1 mouse_genomes_project 19 43687910 43791644 - MGP_NODShiLtJ_P0051451 Slit1 protein_coding protein_coding MGP_NODShiLtJ_T0051054.1 MGP_NODShiLtJ_G0024817.1 mouse_genomes_project 19 23181803 23344770 - MGP_NODShiLtJ_P0051054 Mamdc2 protein_coding protein_coding MGP_NODShiLtJ_T0050944.1 MGP_NODShiLtJ_G0024759.1 mouse_genomes_project 19 11001820 11002744 - MGP_NODShiLtJ_P0050944 Olfr1453 protein_coding protein_coding MGP_NODShiLtJ_T0051244.1 MGP_NODShiLtJ_G0024883.1 mouse_genomes_project 19 35023629 35043692 + MGP_NODShiLtJ_P0051244 Lipf protein_coding protein_coding MGP_NODShiLtJ_T0050620.1 MGP_NODShiLtJ_G0024632.1 mouse_genomes_project 19 6084470 6099838 - MGP_NODShiLtJ_P0050620 Slc3a2 protein_coding protein_coding MGP_NODShiLtJ_T0050621.1 MGP_NODShiLtJ_G0024632.1 mouse_genomes_project 19 6086212 6090260 - MGP_NODShiLtJ_P0050621 Slc3a2 protein_coding protein_coding MGP_NODShiLtJ_T0050622.1 MGP_NODShiLtJ_G0024632.1 mouse_genomes_project 19 6086638 6090261 - MGP_NODShiLtJ_P0050622 Slc3a2 protein_coding protein_coding MGP_NODShiLtJ_T0050623.1 MGP_NODShiLtJ_G0024632.1 mouse_genomes_project 19 6086670 6091338 - MGP_NODShiLtJ_P0050623 Slc3a2 protein_coding protein_coding MGP_NODShiLtJ_T0050624.1 MGP_NODShiLtJ_G0024632.1 mouse_genomes_project 19 6090060 6099941 - Slc3a2 protein_coding retained_intron MGP_NODShiLtJ_T0050625.1 MGP_NODShiLtJ_G0024632.1 mouse_genomes_project 19 6090313 6091001 - MGP_NODShiLtJ_P0050625 Slc3a2 protein_coding protein_coding MGP_NODShiLtJ_T0050626.1 MGP_NODShiLtJ_G0024632.1 mouse_genomes_project 19 6090324 6091088 - MGP_NODShiLtJ_P0050626 Slc3a2 protein_coding protein_coding MGP_NODShiLtJ_T0050221.1 MGP_NODShiLtJ_G0024529.1 mouse_genomes_project 19 2317459 2322334 - MGP_NODShiLtJ_P0050221 Cst6 protein_coding protein_coding MGP_NODShiLtJ_T0050510.1 MGP_NODShiLtJ_G0024593.1 mouse_genomes_project 19 3648535 3655710 - MGP_NODShiLtJ_P0050510 Slc22a12 protein_coding protein_coding MGP_NODShiLtJ_T0050511.1 MGP_NODShiLtJ_G0024593.1 mouse_genomes_project 19 3648755 3654240 - Slc22a12 protein_coding processed_transcript MGP_NODShiLtJ_T0050512.1 MGP_NODShiLtJ_G0024593.1 mouse_genomes_project 19 3650427 3655402 - MGP_NODShiLtJ_P0050512 Slc22a12 protein_coding protein_coding MGP_NODShiLtJ_T0099079.1 MGP_NODShiLtJ_G0037473.1 mouse_genomes_project 19 46093856 46093963 - Gm24400 snRNA snRNA MGP_NODShiLtJ_T0051104.1 MGP_NODShiLtJ_G0024837.1 mouse_genomes_project 19 27119966 27123365 + MGP_NODShiLtJ_P0051104 Gm815 protein_coding protein_coding MGP_NODShiLtJ_T0051201.1 MGP_NODShiLtJ_G0024864.1 mouse_genomes_project 19 30820035 30827921 + MGP_NODShiLtJ_P0051201 Mbl2 protein_coding protein_coding MGP_NODShiLtJ_T0051389.1 MGP_NODShiLtJ_G0024943.1 mouse_genomes_project 19 42014631 42053625 + MGP_NODShiLtJ_P0051389 Cyp2c50 protein_coding protein_coding MGP_NODShiLtJ_T0051390.1 MGP_NODShiLtJ_G0024943.1 mouse_genomes_project 19 42014633 42053625 + MGP_NODShiLtJ_P0051390 Cyp2c50 protein_coding protein_coding MGP_NODShiLtJ_T0051391.1 MGP_NODShiLtJ_G0024943.1 mouse_genomes_project 19 42014659 42053631 + MGP_NODShiLtJ_P0051391 Cyp2c50 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050692.1 MGP_NODShiLtJ_G0024646.1 mouse_genomes_project 19 6274440 6275358 - MGP_NODShiLtJ_P0050692 Uqcc3 protein_coding protein_coding MGP_NODShiLtJ_T0050172.1 MGP_NODShiLtJ_G0024505.1 mouse_genomes_project 19 1757975 1771911 - MGP_NODShiLtJ_P0050172 Ccs protein_coding protein_coding MGP_NODShiLtJ_T0050696.1 MGP_NODShiLtJ_G0024648.1 mouse_genomes_project 19 6283277 6287743 + MGP_NODShiLtJ_P0050696 1810009A15Rik protein_coding protein_coding MGP_NODShiLtJ_T0050698.1 MGP_NODShiLtJ_G0024648.1 mouse_genomes_project 19 6283323 6287608 + 1810009A15Rik protein_coding retained_intron MGP_NODShiLtJ_T0050699.1 MGP_NODShiLtJ_G0024648.1 mouse_genomes_project 19 6283339 6287408 + MGP_NODShiLtJ_P0050699 1810009A15Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050700.1 MGP_NODShiLtJ_G0024648.1 mouse_genomes_project 19 6283353 6287327 + 1810009A15Rik protein_coding retained_intron MGP_NODShiLtJ_T0050701.1 MGP_NODShiLtJ_G0024648.1 mouse_genomes_project 19 6283363 6287603 + 1810009A15Rik protein_coding retained_intron MGP_NODShiLtJ_T0050021.1 MGP_NODShiLtJ_G0024463.1 mouse_genomes_project 19 756768 773035 - MGP_NODShiLtJ_P0050021 Aldh3b1 protein_coding protein_coding MGP_NODShiLtJ_T0007021.1 MGP_NODShiLtJ_G0005759.1 mouse_genomes_project 19 29098516 29142306 + D930032P07Rik lincRNA lincRNA MGP_NODShiLtJ_T0007022.1 MGP_NODShiLtJ_G0005759.1 mouse_genomes_project 19 29098520 29142031 + D930032P07Rik lincRNA lincRNA MGP_NODShiLtJ_T0017562.1 MGP_NODShiLtJ_G0015252.1 mouse_genomes_project 19 9229003 9266834 - processed_transcript antisense MGP_NODShiLtJ_T0017563.1 MGP_NODShiLtJ_G0015252.1 mouse_genomes_project 19 9238508 9266835 - processed_transcript antisense MGP_NODShiLtJ_T0051600.1 MGP_NODShiLtJ_G0025011.1 mouse_genomes_project 19 47064364 47148922 + MGP_NODShiLtJ_P0051600 Pax2 protein_coding protein_coding MGP_NODShiLtJ_T0051601.1 MGP_NODShiLtJ_G0025011.1 mouse_genomes_project 19 47065712 47148942 + MGP_NODShiLtJ_P0051601 Pax2 protein_coding protein_coding MGP_NODShiLtJ_T0051602.1 MGP_NODShiLtJ_G0025011.1 mouse_genomes_project 19 47068180 47128657 + MGP_NODShiLtJ_P0051602 Pax2 protein_coding protein_coding MGP_NODShiLtJ_T0010213.1 MGP_NODShiLtJ_G0008346.1 mouse_genomes_project 19 42896273 42896360 + Mir8092 miRNA miRNA MGP_NODShiLtJ_T0017527.1 MGP_NODShiLtJ_G0015244.1 mouse_genomes_project 19 1348270 1357547 + A930001C03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017528.1 MGP_NODShiLtJ_G0015244.1 mouse_genomes_project 19 1348825 1357404 + A930001C03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017529.1 MGP_NODShiLtJ_G0015244.1 mouse_genomes_project 19 1352944 1357084 + A930001C03Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0017530.1 MGP_NODShiLtJ_G0015244.1 mouse_genomes_project 19 1356033 1357553 + A930001C03Rik processed_transcript retained_intron MGP_NODShiLtJ_T0007008.1 MGP_NODShiLtJ_G0005749.1 mouse_genomes_project 19 8736733 8740852 - AW112010 lincRNA lincRNA MGP_NODShiLtJ_T0050401.1 MGP_NODShiLtJ_G0024581.1 mouse_genomes_project 19 3255791 3298658 + MGP_NODShiLtJ_P0050401 Majin protein_coding protein_coding MGP_NODShiLtJ_T0050402.1 MGP_NODShiLtJ_G0024581.1 mouse_genomes_project 19 3255870 3298664 + MGP_NODShiLtJ_P0050402 Majin protein_coding protein_coding MGP_NODShiLtJ_T0050270.1 MGP_NODShiLtJ_G0024545.1 mouse_genomes_project 19 2565713 2568901 + MGP_NODShiLtJ_P0050270 Ap5b1 protein_coding protein_coding MGP_NODShiLtJ_T0101776.1 MGP_NODShiLtJ_G0039944.1 mouse_genomes_project 19 6788445 6793404 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0017577.1 MGP_NODShiLtJ_G0015258.1 mouse_genomes_project 19 44898719 44901126 + Gm16244 processed_transcript processed_transcript MGP_NODShiLtJ_T0017578.1 MGP_NODShiLtJ_G0015258.1 mouse_genomes_project 19 44898797 44899951 + Gm16244 processed_transcript processed_transcript MGP_NODShiLtJ_T0050368.1 MGP_NODShiLtJ_G0024572.1 mouse_genomes_project 19 3136378 3142784 - MGP_NODShiLtJ_P0050368 Gm28374 protein_coding protein_coding MGP_NODShiLtJ_T0051179.1 MGP_NODShiLtJ_G0024857.1 mouse_genomes_project 19 30230868 30241440 + MGP_NODShiLtJ_P0051179 Mlana protein_coding protein_coding MGP_NODShiLtJ_T0050887.1 MGP_NODShiLtJ_G0024719.1 mouse_genomes_project 19 9564499 9580653 + MGP_NODShiLtJ_P0050887 Gif protein_coding protein_coding MGP_NODShiLtJ_T0003812.1 MGP_NODShiLtJ_G0003408.1 mouse_genomes_project 19 40471636 40475519 - Gm28991 antisense antisense MGP_NODShiLtJ_T0051243.1 MGP_NODShiLtJ_G0024882.1 mouse_genomes_project 19 34854700 34862771 + MGP_NODShiLtJ_P0051243 Gm5519 protein_coding protein_coding MGP_NODShiLtJ_T0051929.1 MGP_NODShiLtJ_G0025112.1 mouse_genomes_project 19 61598212 62187345 + MGP_NODShiLtJ_P0051929 Atrnl1 protein_coding protein_coding MGP_NODShiLtJ_T0013278.1 MGP_NODShiLtJ_G0011386.1 mouse_genomes_project 19 48729961 48731065 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050971.1 MGP_NODShiLtJ_G0024786.1 mouse_genomes_project 19 12885120 13058611 - MGP_NODShiLtJ_P0050971 Tle4 protein_coding protein_coding MGP_NODShiLtJ_T0050972.1 MGP_NODShiLtJ_G0024786.1 mouse_genomes_project 19 12885198 13058679 - MGP_NODShiLtJ_P0050972 Tle4 protein_coding protein_coding MGP_NODShiLtJ_T0101779.1 MGP_NODShiLtJ_G0039947.1 mouse_genomes_project 19 10067270 10068185 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0100334.1 MGP_NODShiLtJ_G0038728.1 mouse_genomes_project 19 48892356 48892465 + Gm24610 snoRNA snoRNA MGP_NODShiLtJ_T0051506.1 MGP_NODShiLtJ_G0024980.1 mouse_genomes_project 19 44386637 44538086 - MGP_NODShiLtJ_P0051506 Crtac1 protein_coding protein_coding MGP_NODShiLtJ_T0098000.1 MGP_NODShiLtJ_G0036412.1 mouse_genomes_project 19 53928090 53928127 + Gm25659 rRNA rRNA MGP_NODShiLtJ_T0050453.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3462597 3476929 + MGP_NODShiLtJ_P0050453 Sf1 protein_coding protein_coding MGP_NODShiLtJ_T0050454.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3462626 3476102 + MGP_NODShiLtJ_P0050454 Sf1 protein_coding protein_coding MGP_NODShiLtJ_T0050455.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3462717 3475411 + MGP_NODShiLtJ_P0050455 Sf1 protein_coding protein_coding MGP_NODShiLtJ_T0050456.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3462829 3464863 + Sf1 protein_coding retained_intron MGP_NODShiLtJ_T0050457.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3462829 3476095 + MGP_NODShiLtJ_P0050457 Sf1 protein_coding protein_coding MGP_NODShiLtJ_T0050458.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3462829 3476101 + MGP_NODShiLtJ_P0050458 Sf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050459.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3462870 3467692 + Sf1 protein_coding retained_intron MGP_NODShiLtJ_T0050460.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3463101 3471101 + MGP_NODShiLtJ_P0050460 Sf1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050461.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3463464 3471527 + MGP_NODShiLtJ_P0050461 Sf1 protein_coding protein_coding MGP_NODShiLtJ_T0050462.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3469026 3471000 + Sf1 protein_coding processed_transcript MGP_NODShiLtJ_T0050463.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3469619 3470602 + Sf1 protein_coding retained_intron MGP_NODShiLtJ_T0050464.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3471320 3471829 + Sf1 protein_coding retained_intron MGP_NODShiLtJ_T0050465.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3472528 3475553 + MGP_NODShiLtJ_P0050465 Sf1 protein_coding protein_coding MGP_NODShiLtJ_T0050466.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3472917 3475411 + MGP_NODShiLtJ_P0050466 Sf1 protein_coding protein_coding MGP_NODShiLtJ_T0050467.1 MGP_NODShiLtJ_G0024589.1 mouse_genomes_project 19 3473036 3474679 + MGP_NODShiLtJ_P0050467 Sf1 protein_coding protein_coding MGP_NODShiLtJ_T0050200.1 MGP_NODShiLtJ_G0024520.1 mouse_genomes_project 19 2017694 2018968 - Tmem151a protein_coding processed_transcript MGP_NODShiLtJ_T0050201.1 MGP_NODShiLtJ_G0024520.1 mouse_genomes_project 19 2017870 2034211 - MGP_NODShiLtJ_P0050201 Tmem151a protein_coding protein_coding MGP_NODShiLtJ_T0050202.1 MGP_NODShiLtJ_G0024520.1 mouse_genomes_project 19 2018689 2034211 - MGP_NODShiLtJ_P0050202 Tmem151a protein_coding protein_coding MGP_NODShiLtJ_T0050203.1 MGP_NODShiLtJ_G0024520.1 mouse_genomes_project 19 2027986 2034255 - MGP_NODShiLtJ_P0050203 Tmem151a protein_coding protein_coding MGP_NODShiLtJ_T0050204.1 MGP_NODShiLtJ_G0024520.1 mouse_genomes_project 19 2031558 2033605 - Tmem151a protein_coding processed_transcript MGP_NODShiLtJ_T0101780.1 MGP_NODShiLtJ_G0039948.1 mouse_genomes_project 19 34705075 34819336 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0051171.1 MGP_NODShiLtJ_G0024856.1 mouse_genomes_project 19 30142093 30184158 - MGP_NODShiLtJ_P0051171 Ermp1 protein_coding protein_coding MGP_NODShiLtJ_T0051172.1 MGP_NODShiLtJ_G0024856.1 mouse_genomes_project 19 30142097 30146115 - Ermp1 protein_coding processed_transcript MGP_NODShiLtJ_T0051173.1 MGP_NODShiLtJ_G0024856.1 mouse_genomes_project 19 30144081 30183930 - MGP_NODShiLtJ_P0051173 Ermp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051174.1 MGP_NODShiLtJ_G0024856.1 mouse_genomes_project 19 30146286 30181770 - MGP_NODShiLtJ_P0051174 Ermp1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051175.1 MGP_NODShiLtJ_G0024856.1 mouse_genomes_project 19 30146501 30147104 - Ermp1 protein_coding retained_intron MGP_NODShiLtJ_T0051176.1 MGP_NODShiLtJ_G0024856.1 mouse_genomes_project 19 30162821 30175216 - Ermp1 protein_coding processed_transcript MGP_NODShiLtJ_T0051177.1 MGP_NODShiLtJ_G0024856.1 mouse_genomes_project 19 30163767 30184133 - Ermp1 protein_coding retained_intron MGP_NODShiLtJ_T0051178.1 MGP_NODShiLtJ_G0024856.1 mouse_genomes_project 19 30180452 30184121 - Ermp1 protein_coding retained_intron MGP_NODShiLtJ_T0050905.1 MGP_NODShiLtJ_G0024735.1 mouse_genomes_project 19 10168939 10169675 - MGP_NODShiLtJ_P0050905 protein_coding protein_coding MGP_NODShiLtJ_T0051026.1 MGP_NODShiLtJ_G0024808.1 mouse_genomes_project 19 20908526 20917087 + MGP_NODShiLtJ_P0051026 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051027.1 MGP_NODShiLtJ_G0024808.1 mouse_genomes_project 19 20908988 20916949 + MGP_NODShiLtJ_P0051027 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051028.1 MGP_NODShiLtJ_G0024808.1 mouse_genomes_project 19 20909547 20913304 + MGP_NODShiLtJ_P0051028 protein_coding protein_coding MGP_NODShiLtJ_T0051029.1 MGP_NODShiLtJ_G0024808.1 mouse_genomes_project 19 20912245 20917180 + protein_coding retained_intron MGP_NODShiLtJ_T0051030.1 MGP_NODShiLtJ_G0024808.1 mouse_genomes_project 19 20912305 20917454 + protein_coding retained_intron MGP_NODShiLtJ_T0050268.1 MGP_NODShiLtJ_G0024543.1 mouse_genomes_project 19 2493359 2494380 - MGP_NODShiLtJ_P0050268 1700020D05Rik protein_coding protein_coding MGP_NODShiLtJ_T0051058.1 MGP_NODShiLtJ_G0024821.1 mouse_genomes_project 19 23673450 23878726 + MGP_NODShiLtJ_P0051058 Apba1 protein_coding protein_coding MGP_NODShiLtJ_T0050098.1 MGP_NODShiLtJ_G0024483.1 mouse_genomes_project 19 1045923 1057079 - MGP_NODShiLtJ_P0050098 Carns1 protein_coding protein_coding MGP_NODShiLtJ_T0050673.1 MGP_NODShiLtJ_G0024640.1 mouse_genomes_project 19 6196899 6207158 - MGP_NODShiLtJ_P0050673 Ttc9c protein_coding protein_coding MGP_NODShiLtJ_T0050674.1 MGP_NODShiLtJ_G0024640.1 mouse_genomes_project 19 6198960 6206749 - MGP_NODShiLtJ_P0050674 Ttc9c protein_coding protein_coding MGP_NODShiLtJ_T0050675.1 MGP_NODShiLtJ_G0024640.1 mouse_genomes_project 19 6199120 6207119 - MGP_NODShiLtJ_P0050675 Ttc9c protein_coding protein_coding MGP_NODShiLtJ_T0050676.1 MGP_NODShiLtJ_G0024640.1 mouse_genomes_project 19 6206121 6207057 - Ttc9c protein_coding retained_intron MGP_NODShiLtJ_T0050709.1 MGP_NODShiLtJ_G0024653.1 mouse_genomes_project 19 6329017 6342046 + MGP_NODShiLtJ_P0050709 Eml3 protein_coding protein_coding MGP_NODShiLtJ_T0051868.1 MGP_NODShiLtJ_G0025099.1 mouse_genomes_project 19 60205870 60282294 - MGP_NODShiLtJ_P0051868 Nrap protein_coding protein_coding MGP_NODShiLtJ_T0051869.1 MGP_NODShiLtJ_G0025099.1 mouse_genomes_project 19 60205876 60282320 - MGP_NODShiLtJ_P0051869 Nrap protein_coding protein_coding MGP_NODShiLtJ_T0051870.1 MGP_NODShiLtJ_G0025099.1 mouse_genomes_project 19 60205936 60282318 - MGP_NODShiLtJ_P0051870 Nrap protein_coding protein_coding MGP_NODShiLtJ_T0051871.1 MGP_NODShiLtJ_G0025099.1 mouse_genomes_project 19 60205959 60282318 - MGP_NODShiLtJ_P0051871 Nrap protein_coding protein_coding MGP_NODShiLtJ_T0051872.1 MGP_NODShiLtJ_G0025099.1 mouse_genomes_project 19 60206025 60269738 - MGP_NODShiLtJ_P0051872 Nrap protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051873.1 MGP_NODShiLtJ_G0025099.1 mouse_genomes_project 19 60206028 60282160 - MGP_NODShiLtJ_P0051873 Nrap protein_coding protein_coding MGP_NODShiLtJ_T0017567.1 MGP_NODShiLtJ_G0015255.1 mouse_genomes_project 19 26983694 27048884 - 4931403E22Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0051809.1 MGP_NODShiLtJ_G0025081.1 mouse_genomes_project 19 56965699 56980140 - MGP_NODShiLtJ_P0051809 protein_coding protein_coding MGP_NODShiLtJ_T0051267.1 MGP_NODShiLtJ_G0024895.1 mouse_genomes_project 19 35726979 35728952 + MGP_NODShiLtJ_P0051267 protein_coding protein_coding MGP_NODShiLtJ_T0051517.1 MGP_NODShiLtJ_G0024983.1 mouse_genomes_project 19 44841674 44872550 - MGP_NODShiLtJ_P0051517 Pyroxd2 protein_coding protein_coding MGP_NODShiLtJ_T0097998.1 MGP_NODShiLtJ_G0036410.1 mouse_genomes_project 19 46170184 46170301 + n-R5s21 rRNA rRNA MGP_NODShiLtJ_T0051259.1 MGP_NODShiLtJ_G0024890.1 mouse_genomes_project 19 35364950 35401896 + MGP_NODShiLtJ_P0051259 Fas protein_coding protein_coding MGP_NODShiLtJ_T0051260.1 MGP_NODShiLtJ_G0024890.1 mouse_genomes_project 19 35364950 35383966 + MGP_NODShiLtJ_P0051260 Fas protein_coding protein_coding MGP_NODShiLtJ_T0050553.1 MGP_NODShiLtJ_G0024611.1 mouse_genomes_project 19 4179168 4198538 - MGP_NODShiLtJ_P0050553 Stip1 protein_coding protein_coding MGP_NODShiLtJ_T0050515.1 MGP_NODShiLtJ_G0024596.1 mouse_genomes_project 19 4041214 4044496 - Prdx5 protein_coding retained_intron MGP_NODShiLtJ_T0050516.1 MGP_NODShiLtJ_G0024596.1 mouse_genomes_project 19 4041223 4044624 - MGP_NODShiLtJ_P0050516 Prdx5 protein_coding protein_coding MGP_NODShiLtJ_T0050517.1 MGP_NODShiLtJ_G0024596.1 mouse_genomes_project 19 4041267 4042819 - MGP_NODShiLtJ_P0050517 Prdx5 protein_coding protein_coding MGP_NODShiLtJ_T0050518.1 MGP_NODShiLtJ_G0024596.1 mouse_genomes_project 19 4041363 4044135 - MGP_NODShiLtJ_P0050518 Prdx5 protein_coding protein_coding MGP_NODShiLtJ_T0051739.1 MGP_NODShiLtJ_G0025055.1 mouse_genomes_project 19 49651456 49669224 - MGP_NODShiLtJ_P0051739 Pcgf6 protein_coding protein_coding MGP_NODShiLtJ_T0050896.1 MGP_NODShiLtJ_G0024726.1 mouse_genomes_project 19 9891846 9892779 - MGP_NODShiLtJ_P0050896 Olfr1423 protein_coding protein_coding MGP_NODShiLtJ_T0051266.1 MGP_NODShiLtJ_G0024894.1 mouse_genomes_project 19 35708892 35728647 + MGP_NODShiLtJ_P0051266 Ifit3b protein_coding protein_coding MGP_NODShiLtJ_T0051130.1 MGP_NODShiLtJ_G0024843.1 mouse_genomes_project 19 29273184 29320531 + Slc1a1 protein_coding retained_intron MGP_NODShiLtJ_T0051131.1 MGP_NODShiLtJ_G0024843.1 mouse_genomes_project 19 29273209 29358809 + MGP_NODShiLtJ_P0051131 Slc1a1 protein_coding protein_coding MGP_NODShiLtJ_T0051132.1 MGP_NODShiLtJ_G0024843.1 mouse_genomes_project 19 29273270 29350837 + Slc1a1 protein_coding retained_intron MGP_NODShiLtJ_T0051133.1 MGP_NODShiLtJ_G0024843.1 mouse_genomes_project 19 29335443 29356726 + Slc1a1 protein_coding retained_intron MGP_NODShiLtJ_T0051135.1 MGP_NODShiLtJ_G0024843.1 mouse_genomes_project 19 29338226 29357487 + Slc1a1 protein_coding retained_intron MGP_NODShiLtJ_T0051718.1 MGP_NODShiLtJ_G0025045.1 mouse_genomes_project 19 49058474 49073146 + MGP_NODShiLtJ_P0051718 Trim8 protein_coding protein_coding MGP_NODShiLtJ_T0007058.1 MGP_NODShiLtJ_G0005785.1 mouse_genomes_project 19 63669695 63752231 + 2700089I24Rik lincRNA lincRNA MGP_NODShiLtJ_T0051589.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46839814 46846669 - MGP_NODShiLtJ_P0051589 Ndufb8 protein_coding protein_coding MGP_NODShiLtJ_T0051590.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46841482 46846683 - MGP_NODShiLtJ_P0051590 Ndufb8 protein_coding protein_coding MGP_NODShiLtJ_T0051591.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46841495 46846662 - MGP_NODShiLtJ_P0051591 Ndufb8 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051592.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46841497 46844123 - Ndufb8 protein_coding retained_intron MGP_NODShiLtJ_T0051593.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46843864 46846229 - MGP_NODShiLtJ_P0051593 Ndufb8 protein_coding protein_coding MGP_NODShiLtJ_T0051594.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46844082 46846647 - MGP_NODShiLtJ_P0051594 Ndufb8 protein_coding protein_coding MGP_NODShiLtJ_T0051595.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46844517 46846648 - Ndufb8 protein_coding retained_intron MGP_NODShiLtJ_T0051596.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46845943 46846669 - Ndufb8 protein_coding retained_intron MGP_NODShiLtJ_T0051597.1 MGP_NODShiLtJ_G0025009.1 mouse_genomes_project 19 46845957 46846666 - Ndufb8 protein_coding retained_intron MGP_NODShiLtJ_T0050417.1 MGP_NODShiLtJ_G0024586.1 mouse_genomes_project 19 3385817 3416314 + MGP_NODShiLtJ_P0050417 Cdc42bpg protein_coding protein_coding MGP_NODShiLtJ_T0050418.1 MGP_NODShiLtJ_G0024586.1 mouse_genomes_project 19 3412469 3412894 + Cdc42bpg protein_coding retained_intron MGP_NODShiLtJ_T0050951.1 MGP_NODShiLtJ_G0024766.1 mouse_genomes_project 19 11238185 11239118 + MGP_NODShiLtJ_P0050951 Olfr1463 protein_coding protein_coding MGP_NODShiLtJ_T0049966.1 MGP_NODShiLtJ_G0024455.1 mouse_genomes_project 19 177609 182152 - MGP_NODShiLtJ_P0049966 Gal protein_coding protein_coding MGP_NODShiLtJ_T0017535.1 MGP_NODShiLtJ_G0015248.1 mouse_genomes_project 19 3738991 3801835 - 2410152P15Rik processed_transcript processed_transcript MGP_NODShiLtJ_T0051238.1 MGP_NODShiLtJ_G0024878.1 mouse_genomes_project 19 34482281 34518576 - MGP_NODShiLtJ_P0051238 Lipo4 protein_coding protein_coding MGP_NODShiLtJ_T0051239.1 MGP_NODShiLtJ_G0024878.1 mouse_genomes_project 19 34483227 34518580 - MGP_NODShiLtJ_P0051239 Lipo4 protein_coding protein_coding MGP_NODShiLtJ_T0051806.1 MGP_NODShiLtJ_G0025079.1 mouse_genomes_project 19 56884633 56959137 + MGP_NODShiLtJ_P0051806 Mxi1 protein_coding protein_coding MGP_NODShiLtJ_T0051807.1 MGP_NODShiLtJ_G0025079.1 mouse_genomes_project 19 56905282 56956626 + MGP_NODShiLtJ_P0051807 Mxi1 protein_coding protein_coding MGP_NODShiLtJ_T0050679.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6225328 6236444 + MGP_NODShiLtJ_P0050679 Bscl2 protein_coding protein_coding MGP_NODShiLtJ_T0050680.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6225548 6228099 + Bscl2 protein_coding processed_transcript MGP_NODShiLtJ_T0050681.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6225590 6236428 + MGP_NODShiLtJ_P0050681 Bscl2 protein_coding protein_coding MGP_NODShiLtJ_T0050682.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6227183 6236427 + MGP_NODShiLtJ_P0050682 Bscl2 protein_coding protein_coding MGP_NODShiLtJ_T0050683.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6227228 6236428 + Bscl2 protein_coding retained_intron MGP_NODShiLtJ_T0050684.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6227245 6236399 + MGP_NODShiLtJ_P0050684 Bscl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050685.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6228374 6236427 + MGP_NODShiLtJ_P0050685 Bscl2 protein_coding protein_coding MGP_NODShiLtJ_T0050686.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6228390 6236427 + Bscl2 protein_coding retained_intron MGP_NODShiLtJ_T0050687.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6228390 6236427 + Bscl2 protein_coding retained_intron MGP_NODShiLtJ_T0050688.1 MGP_NODShiLtJ_G0024643.1 mouse_genomes_project 19 6234045 6236384 + MGP_NODShiLtJ_P0050688 Bscl2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0017533.1 MGP_NODShiLtJ_G0015247.1 mouse_genomes_project 19 3511194 3520288 - Gm14965 processed_transcript antisense MGP_NODShiLtJ_T0017534.1 MGP_NODShiLtJ_G0015247.1 mouse_genomes_project 19 3518491 3520288 - Gm14965 processed_transcript retained_intron MGP_NODShiLtJ_T0003813.1 MGP_NODShiLtJ_G0003409.1 mouse_genomes_project 19 44643696 44669118 - Gm16541 antisense antisense MGP_NODShiLtJ_T0003814.1 MGP_NODShiLtJ_G0003409.1 mouse_genomes_project 19 44643702 44669105 - Gm16541 antisense antisense MGP_NODShiLtJ_T0003815.1 MGP_NODShiLtJ_G0003409.1 mouse_genomes_project 19 44668516 44669118 - Gm16541 antisense antisense MGP_NODShiLtJ_T0051956.1 MGP_NODShiLtJ_G0025126.1 mouse_genomes_project 19 63629853 63637125 + MGP_NODShiLtJ_P0051956 Emx2 protein_coding protein_coding MGP_NODShiLtJ_T0051957.1 MGP_NODShiLtJ_G0025126.1 mouse_genomes_project 19 63631001 63637121 + MGP_NODShiLtJ_P0051957 Emx2 protein_coding protein_coding MGP_NODShiLtJ_T0051958.1 MGP_NODShiLtJ_G0025126.1 mouse_genomes_project 19 63634243 63635974 + Emx2 protein_coding processed_transcript MGP_NODShiLtJ_T0050942.1 MGP_NODShiLtJ_G0024757.1 mouse_genomes_project 19 10907794 10908772 + MGP_NODShiLtJ_P0050942 Olfr1450 protein_coding protein_coding MGP_NODShiLtJ_T0050730.1 MGP_NODShiLtJ_G0024662.1 mouse_genomes_project 19 7579874 7582264 + MGP_NODShiLtJ_P0050730 Fth1 protein_coding protein_coding MGP_NODShiLtJ_T0050908.1 MGP_NODShiLtJ_G0024738.1 mouse_genomes_project 19 10293309 10294397 + MGP_NODShiLtJ_P0050908 Olfr1441 protein_coding protein_coding MGP_NODShiLtJ_T0050947.1 MGP_NODShiLtJ_G0024762.1 mouse_genomes_project 19 11080825 11081731 - MGP_NODShiLtJ_P0050947 Olfr1458 protein_coding protein_coding MGP_NODShiLtJ_T0010230.1 MGP_NODShiLtJ_G0008363.1 mouse_genomes_project 19 64864432 64864521 + Gm25238 miRNA miRNA MGP_NODShiLtJ_T0010214.1 MGP_NODShiLtJ_G0008347.1 mouse_genomes_project 19 43624956 43625095 + Mir8091 miRNA miRNA MGP_NODShiLtJ_T0051055.1 MGP_NODShiLtJ_G0024818.1 mouse_genomes_project 19 23457660 23558386 - MGP_NODShiLtJ_P0051055 1700028P14Rik protein_coding protein_coding MGP_NODShiLtJ_T0100313.1 MGP_NODShiLtJ_G0038707.1 mouse_genomes_project 19 6101275 6101347 + Gm24452 snoRNA snoRNA MGP_NODShiLtJ_T0051362.1 MGP_NODShiLtJ_G0024929.1 mouse_genomes_project 19 40566568 40663543 + MGP_NODShiLtJ_P0051362 Tbc1d12 protein_coding protein_coding MGP_NODShiLtJ_T0100339.1 MGP_NODShiLtJ_G0038733.1 mouse_genomes_project 19 65343994 65344123 - Gm22520 snoRNA snoRNA MGP_NODShiLtJ_T0050163.1 MGP_NODShiLtJ_G0024503.1 mouse_genomes_project 19 1710696 1721138 - MGP_NODShiLtJ_P0050163 Rbm4 protein_coding protein_coding MGP_NODShiLtJ_T0050167.1 MGP_NODShiLtJ_G0024503.1 mouse_genomes_project 19 1716471 1721120 - Rbm4 protein_coding retained_intron MGP_NODShiLtJ_T0049954.1 MGP_NODShiLtJ_G0024451.1 mouse_genomes_project 19 15637 39268 - MGP_NODShiLtJ_P0049954 Ighmbp2 protein_coding protein_coding MGP_NODShiLtJ_T0049955.1 MGP_NODShiLtJ_G0024451.1 mouse_genomes_project 19 19023 39462 - MGP_NODShiLtJ_P0049955 Ighmbp2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0049956.1 MGP_NODShiLtJ_G0024451.1 mouse_genomes_project 19 19569 21924 - Ighmbp2 protein_coding retained_intron MGP_NODShiLtJ_T0051787.1 MGP_NODShiLtJ_G0025075.1 mouse_genomes_project 19 53186252 53768912 - MGP_NODShiLtJ_P0051787 protein_coding protein_coding MGP_NODShiLtJ_T0051788.1 MGP_NODShiLtJ_G0025075.1 mouse_genomes_project 19 53190611 53768912 - MGP_NODShiLtJ_P0051788 protein_coding protein_coding MGP_NODShiLtJ_T0051789.1 MGP_NODShiLtJ_G0025075.1 mouse_genomes_project 19 53193949 53297977 - MGP_NODShiLtJ_P0051789 protein_coding protein_coding MGP_NODShiLtJ_T0051790.1 MGP_NODShiLtJ_G0025075.1 mouse_genomes_project 19 53195643 53768751 - MGP_NODShiLtJ_P0051790 protein_coding protein_coding MGP_NODShiLtJ_T0013277.1 MGP_NODShiLtJ_G0011385.1 mouse_genomes_project 19 45447745 45448645 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050898.1 MGP_NODShiLtJ_G0024728.1 mouse_genomes_project 19 9990866 9991804 - MGP_NODShiLtJ_P0050898 Olfr1427 protein_coding protein_coding MGP_NODShiLtJ_T0099070.1 MGP_NODShiLtJ_G0037464.1 mouse_genomes_project 19 23174462 23174569 + Gm24263 snRNA snRNA MGP_NODShiLtJ_T0051033.1 MGP_NODShiLtJ_G0024810.1 mouse_genomes_project 19 21224168 21226152 + MGP_NODShiLtJ_P0051033 Gm3443 protein_coding protein_coding MGP_NODShiLtJ_T0100332.1 MGP_NODShiLtJ_G0038726.1 mouse_genomes_project 19 44815714 44815840 - Gm25216 snoRNA snoRNA MGP_NODShiLtJ_T0051305.1 MGP_NODShiLtJ_G0024909.1 mouse_genomes_project 19 38436697 38438762 - MGP_NODShiLtJ_P0051305 Fgfbp3 protein_coding protein_coding MGP_NODShiLtJ_T0050671.1 MGP_NODShiLtJ_G0024638.1 mouse_genomes_project 19 6178536 6184968 - MGP_NODShiLtJ_P0050671 Polr2g protein_coding protein_coding MGP_NODShiLtJ_T0051528.1 MGP_NODShiLtJ_G0024986.1 mouse_genomes_project 19 45629739 45691677 + MGP_NODShiLtJ_P0051528 Cnnm1 protein_coding protein_coding MGP_NODShiLtJ_T0051529.1 MGP_NODShiLtJ_G0024986.1 mouse_genomes_project 19 45629748 45691632 + MGP_NODShiLtJ_P0051529 Cnnm1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051383.1 MGP_NODShiLtJ_G0024940.1 mouse_genomes_project 19 41495766 41742042 - MGP_NODShiLtJ_P0051383 protein_coding protein_coding MGP_NODShiLtJ_T0050969.1 MGP_NODShiLtJ_G0024784.1 mouse_genomes_project 19 12221390 12222475 - MGP_NODShiLtJ_P0050969 Olfr1504 protein_coding protein_coding MGP_NODShiLtJ_T0003808.1 MGP_NODShiLtJ_G0003405.1 mouse_genomes_project 19 24399462 24413780 + Pip5k1bos antisense antisense MGP_NODShiLtJ_T0051781.1 MGP_NODShiLtJ_G0025071.1 mouse_genomes_project 19 50553171 50571561 + MGP_NODShiLtJ_P0051781 Gsto2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051782.1 MGP_NODShiLtJ_G0025071.1 mouse_genomes_project 19 50555514 50569956 + MGP_NODShiLtJ_P0051782 Gsto2 protein_coding protein_coding MGP_NODShiLtJ_T0050763.1 MGP_NODShiLtJ_G0024675.1 mouse_genomes_project 19 8136866 8163101 - MGP_NODShiLtJ_P0050763 Sdhaf2 protein_coding protein_coding MGP_NODShiLtJ_T0050966.1 MGP_NODShiLtJ_G0024781.1 mouse_genomes_project 19 12136154 12137179 - MGP_NODShiLtJ_P0050966 Olfr1500 protein_coding protein_coding MGP_NODShiLtJ_T0050183.1 MGP_NODShiLtJ_G0024510.1 mouse_genomes_project 19 1825988 1845487 - MGP_NODShiLtJ_P0050183 Bbs1 protein_coding protein_coding MGP_NODShiLtJ_T0010199.1 MGP_NODShiLtJ_G0008332.1 mouse_genomes_project 19 9766174 9766247 + Mir6994 miRNA miRNA MGP_NODShiLtJ_T0050116.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1181829 1205156 - MGP_NODShiLtJ_P0050116 Adrbk1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050117.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1181829 1205081 - MGP_NODShiLtJ_P0050117 Adrbk1 protein_coding protein_coding MGP_NODShiLtJ_T0050118.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1181830 1205245 - MGP_NODShiLtJ_P0050118 Adrbk1 protein_coding protein_coding MGP_NODShiLtJ_T0050119.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1181849 1205245 - MGP_NODShiLtJ_P0050119 Adrbk1 protein_coding protein_coding MGP_NODShiLtJ_T0050120.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1182928 1205140 - MGP_NODShiLtJ_P0050120 Adrbk1 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050121.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1183970 1187150 - Adrbk1 protein_coding retained_intron MGP_NODShiLtJ_T0050122.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1186142 1187141 - MGP_NODShiLtJ_P0050122 Adrbk1 protein_coding protein_coding MGP_NODShiLtJ_T0050123.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1186172 1188230 - MGP_NODShiLtJ_P0050123 Adrbk1 protein_coding protein_coding MGP_NODShiLtJ_T0050124.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1188208 1189558 - Adrbk1 protein_coding retained_intron MGP_NODShiLtJ_T0050125.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1189093 1205153 - Adrbk1 protein_coding retained_intron MGP_NODShiLtJ_T0050126.1 MGP_NODShiLtJ_G0024491.1 mouse_genomes_project 19 1190313 1204330 - MGP_NODShiLtJ_P0050126 Adrbk1 protein_coding protein_coding MGP_NODShiLtJ_T0050147.1 MGP_NODShiLtJ_G0024496.1 mouse_genomes_project 19 1426129 1531337 + MGP_NODShiLtJ_P0050147 Pcx protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050148.1 MGP_NODShiLtJ_G0024496.1 mouse_genomes_project 19 1426239 1542323 + MGP_NODShiLtJ_P0050148 Pcx protein_coding protein_coding MGP_NODShiLtJ_T0050149.1 MGP_NODShiLtJ_G0024496.1 mouse_genomes_project 19 1514219 1542323 + MGP_NODShiLtJ_P0050149 Pcx protein_coding protein_coding MGP_NODShiLtJ_T0050106.1 MGP_NODShiLtJ_G0024488.1 mouse_genomes_project 19 1118194 1119921 + MGP_NODShiLtJ_P0050106 Pold4 protein_coding protein_coding MGP_NODShiLtJ_T0051657.1 MGP_NODShiLtJ_G0025031.1 mouse_genomes_project 19 48503489 48506185 + MGP_NODShiLtJ_P0051657 Hps6 protein_coding protein_coding MGP_NODShiLtJ_T0051211.1 MGP_NODShiLtJ_G0024868.1 mouse_genomes_project 19 32691291 32773538 + MGP_NODShiLtJ_P0051211 A1cf protein_coding protein_coding MGP_NODShiLtJ_T0051212.1 MGP_NODShiLtJ_G0024868.1 mouse_genomes_project 19 32691306 32776493 + MGP_NODShiLtJ_P0051212 A1cf protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051536.1 MGP_NODShiLtJ_G0024990.1 mouse_genomes_project 19 45901724 45954386 + MGP_NODShiLtJ_P0051536 Entpd7 protein_coding protein_coding MGP_NODShiLtJ_T0051537.1 MGP_NODShiLtJ_G0024990.1 mouse_genomes_project 19 45901861 45907387 + Entpd7 protein_coding retained_intron MGP_NODShiLtJ_T0051538.1 MGP_NODShiLtJ_G0024990.1 mouse_genomes_project 19 45901892 45943353 + Entpd7 protein_coding retained_intron MGP_NODShiLtJ_T0051539.1 MGP_NODShiLtJ_G0024990.1 mouse_genomes_project 19 45929398 45934650 + Entpd7 protein_coding retained_intron MGP_NODShiLtJ_T0051540.1 MGP_NODShiLtJ_G0024990.1 mouse_genomes_project 19 45947099 45948868 + Entpd7 protein_coding retained_intron MGP_NODShiLtJ_T0050150.1 MGP_NODShiLtJ_G0024497.1 mouse_genomes_project 19 1532356 1536239 - MGP_NODShiLtJ_P0050150 Lrfn4 protein_coding protein_coding MGP_NODShiLtJ_T0050151.1 MGP_NODShiLtJ_G0024497.1 mouse_genomes_project 19 1532363 1536074 - MGP_NODShiLtJ_P0050151 Lrfn4 protein_coding protein_coding MGP_NODShiLtJ_T0051547.1 MGP_NODShiLtJ_G0024993.1 mouse_genomes_project 19 46009427 46075350 + MGP_NODShiLtJ_P0051547 Abcc2 protein_coding protein_coding MGP_NODShiLtJ_T0051548.1 MGP_NODShiLtJ_G0024993.1 mouse_genomes_project 19 46009561 46011902 + Abcc2 protein_coding retained_intron MGP_NODShiLtJ_T0051549.1 MGP_NODShiLtJ_G0024993.1 mouse_genomes_project 19 46009639 46059563 + MGP_NODShiLtJ_P0051549 Abcc2 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0051550.1 MGP_NODShiLtJ_G0024993.1 mouse_genomes_project 19 46030166 46032958 + Abcc2 protein_coding retained_intron MGP_NODShiLtJ_T0051551.1 MGP_NODShiLtJ_G0024993.1 mouse_genomes_project 19 46043187 46046067 + Abcc2 protein_coding retained_intron MGP_NODShiLtJ_T0051552.1 MGP_NODShiLtJ_G0024993.1 mouse_genomes_project 19 46073412 46075338 + MGP_NODShiLtJ_P0051552 Abcc2 protein_coding protein_coding MGP_NODShiLtJ_T0051507.1 MGP_NODShiLtJ_G0024981.1 mouse_genomes_project 19 44624779 44702293 + MGP_NODShiLtJ_P0051507 R3hcc1l protein_coding protein_coding MGP_NODShiLtJ_T0051508.1 MGP_NODShiLtJ_G0024981.1 mouse_genomes_project 19 44624818 44699800 + MGP_NODShiLtJ_P0051508 R3hcc1l protein_coding protein_coding MGP_NODShiLtJ_T0051509.1 MGP_NODShiLtJ_G0024981.1 mouse_genomes_project 19 44624842 44681906 + MGP_NODShiLtJ_P0051509 R3hcc1l protein_coding protein_coding MGP_NODShiLtJ_T0051510.1 MGP_NODShiLtJ_G0024981.1 mouse_genomes_project 19 44670250 44682465 + R3hcc1l protein_coding retained_intron MGP_NODShiLtJ_T0051511.1 MGP_NODShiLtJ_G0024981.1 mouse_genomes_project 19 44689941 44693536 + R3hcc1l protein_coding retained_intron MGP_NODShiLtJ_T0051951.1 MGP_NODShiLtJ_G0025122.1 mouse_genomes_project 19 63323503 63327373 - MGP_NODShiLtJ_P0051951 Vax1 protein_coding protein_coding MGP_NODShiLtJ_T0051952.1 MGP_NODShiLtJ_G0025122.1 mouse_genomes_project 19 63323914 63324297 - Vax1 protein_coding processed_transcript MGP_NODShiLtJ_T0051010.1 MGP_NODShiLtJ_G0024802.1 mouse_genomes_project 19 17741243 17898360 + MGP_NODShiLtJ_P0051010 Trpm6 protein_coding protein_coding MGP_NODShiLtJ_T0051011.1 MGP_NODShiLtJ_G0024802.1 mouse_genomes_project 19 17741291 17898367 + MGP_NODShiLtJ_P0051011 Trpm6 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050496.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3520412 3645908 + MGP_NODShiLtJ_P0050496 Nrxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050497.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3520419 3572678 + Nrxn2 protein_coding retained_intron MGP_NODShiLtJ_T0050498.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3520419 3645907 + MGP_NODShiLtJ_P0050498 Nrxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050499.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3520446 3644969 + MGP_NODShiLtJ_P0050499 Nrxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050500.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3531115 3645908 + MGP_NODShiLtJ_P0050500 Nrxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050501.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3531824 3579255 + MGP_NODShiLtJ_P0050501 Nrxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050502.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3531945 3580214 + MGP_NODShiLtJ_P0050502 Nrxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050503.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3549807 3580228 + Nrxn2 protein_coding processed_transcript MGP_NODShiLtJ_T0050504.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3550645 3580326 + Nrxn2 protein_coding processed_transcript MGP_NODShiLtJ_T0050505.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3558918 3590574 + Nrxn2 protein_coding retained_intron MGP_NODShiLtJ_T0050506.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3579983 3590573 + Nrxn2 protein_coding retained_intron MGP_NODShiLtJ_T0050507.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3610719 3645908 + MGP_NODShiLtJ_P0050507 Nrxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050508.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3610726 3656860 + MGP_NODShiLtJ_P0050508 Nrxn2 protein_coding protein_coding MGP_NODShiLtJ_T0050509.1 MGP_NODShiLtJ_G0024592.1 mouse_genomes_project 19 3629911 3644987 + Nrxn2 protein_coding processed_transcript MGP_NODShiLtJ_T0051946.1 MGP_NODShiLtJ_G0025120.1 mouse_genomes_project 19 63078510 63114581 + MGP_NODShiLtJ_P0051946 Eno4 protein_coding protein_coding MGP_NODShiLtJ_T0051947.1 MGP_NODShiLtJ_G0025120.1 mouse_genomes_project 19 63078510 63114579 + MGP_NODShiLtJ_P0051947 Eno4 protein_coding protein_coding MGP_NODShiLtJ_T0051948.1 MGP_NODShiLtJ_G0025120.1 mouse_genomes_project 19 63089564 63114577 + MGP_NODShiLtJ_P0051948 Eno4 protein_coding protein_coding MGP_NODShiLtJ_T0051949.1 MGP_NODShiLtJ_G0025120.1 mouse_genomes_project 19 63091844 63114093 + MGP_NODShiLtJ_P0051949 Eno4 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050034.1 MGP_NODShiLtJ_G0024470.1 mouse_genomes_project 19 866208 869896 + Doc2g protein_coding retained_intron MGP_NODShiLtJ_T0050035.1 MGP_NODShiLtJ_G0024470.1 mouse_genomes_project 19 866212 868676 + Doc2g protein_coding retained_intron MGP_NODShiLtJ_T0050036.1 MGP_NODShiLtJ_G0024470.1 mouse_genomes_project 19 866223 869897 + MGP_NODShiLtJ_P0050036 Doc2g protein_coding protein_coding MGP_NODShiLtJ_T0050037.1 MGP_NODShiLtJ_G0024470.1 mouse_genomes_project 19 866587 869025 + Doc2g protein_coding retained_intron MGP_NODShiLtJ_T0010223.1 MGP_NODShiLtJ_G0008356.1 mouse_genomes_project 19 50605139 50605221 - Gm22240 miRNA miRNA MGP_NODShiLtJ_T0050826.1 MGP_NODShiLtJ_G0024700.1 mouse_genomes_project 19 8881760 8915112 - MGP_NODShiLtJ_P0050826 Ms4a13 protein_coding protein_coding MGP_NODShiLtJ_T0050827.1 MGP_NODShiLtJ_G0024700.1 mouse_genomes_project 19 8881761 8915126 - MGP_NODShiLtJ_P0050827 Ms4a13 protein_coding protein_coding MGP_NODShiLtJ_T0097997.1 MGP_NODShiLtJ_G0036409.1 mouse_genomes_project 19 45313759 45313867 - Gm22135 rRNA rRNA MGP_NODShiLtJ_T0051816.1 MGP_NODShiLtJ_G0025086.1 mouse_genomes_project 19 57319949 57532414 + MGP_NODShiLtJ_P0051816 Rbm20 protein_coding protein_coding MGP_NODShiLtJ_T0051817.1 MGP_NODShiLtJ_G0025086.1 mouse_genomes_project 19 57319949 57509214 + MGP_NODShiLtJ_P0051817 Rbm20 protein_coding protein_coding MGP_NODShiLtJ_T0051818.1 MGP_NODShiLtJ_G0025086.1 mouse_genomes_project 19 57457215 57479273 + Rbm20 protein_coding processed_transcript MGP_NODShiLtJ_T0051819.1 MGP_NODShiLtJ_G0025086.1 mouse_genomes_project 19 57508660 57532414 + MGP_NODShiLtJ_P0051819 Rbm20 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050385.1 MGP_NODShiLtJ_G0024578.1 mouse_genomes_project 19 3187426 3196337 - MGP_NODShiLtJ_P0050385 Snx15 protein_coding protein_coding MGP_NODShiLtJ_T0050386.1 MGP_NODShiLtJ_G0024578.1 mouse_genomes_project 19 3187879 3196180 - MGP_NODShiLtJ_P0050386 Snx15 protein_coding protein_coding MGP_NODShiLtJ_T0050387.1 MGP_NODShiLtJ_G0024578.1 mouse_genomes_project 19 3188659 3189670 - Snx15 protein_coding retained_intron MGP_NODShiLtJ_T0050388.1 MGP_NODShiLtJ_G0024578.1 mouse_genomes_project 19 3188659 3195840 - Snx15 protein_coding processed_transcript MGP_NODShiLtJ_T0050389.1 MGP_NODShiLtJ_G0024578.1 mouse_genomes_project 19 3189519 3190315 - Snx15 protein_coding processed_transcript MGP_NODShiLtJ_T0050390.1 MGP_NODShiLtJ_G0024578.1 mouse_genomes_project 19 3189932 3196166 - Snx15 protein_coding retained_intron MGP_NODShiLtJ_T0050391.1 MGP_NODShiLtJ_G0024578.1 mouse_genomes_project 19 3189954 3196198 - MGP_NODShiLtJ_P0050391 Snx15 protein_coding protein_coding MGP_NODShiLtJ_T0050628.1 MGP_NODShiLtJ_G0024634.1 mouse_genomes_project 19 6117682 6118190 + MGP_NODShiLtJ_P0050628 1700092M07Rik protein_coding protein_coding MGP_NODShiLtJ_T0050629.1 MGP_NODShiLtJ_G0024634.1 mouse_genomes_project 19 6117726 6118189 + 1700092M07Rik protein_coding retained_intron MGP_NODShiLtJ_T0050146.1 MGP_NODShiLtJ_G0024495.1 mouse_genomes_project 19 1411262 1413056 - MGP_NODShiLtJ_P0050146 2010003K11Rik protein_coding protein_coding MGP_NODShiLtJ_T0050912.1 MGP_NODShiLtJ_G0024742.1 mouse_genomes_project 19 10451499 10469502 + MGP_NODShiLtJ_P0050912 Fam111a protein_coding protein_coding MGP_NODShiLtJ_T0050913.1 MGP_NODShiLtJ_G0024742.1 mouse_genomes_project 19 10451499 10469510 + MGP_NODShiLtJ_P0050913 Fam111a protein_coding protein_coding MGP_NODShiLtJ_T0050914.1 MGP_NODShiLtJ_G0024742.1 mouse_genomes_project 19 10456850 10469504 + MGP_NODShiLtJ_P0050914 Fam111a protein_coding protein_coding MGP_NODShiLtJ_T0050413.1 MGP_NODShiLtJ_G0024585.1 mouse_genomes_project 19 3353678 3379469 + MGP_NODShiLtJ_P0050413 Ehd1 protein_coding protein_coding MGP_NODShiLtJ_T0050414.1 MGP_NODShiLtJ_G0024585.1 mouse_genomes_project 19 3353878 3358346 + Ehd1 protein_coding retained_intron MGP_NODShiLtJ_T0050415.1 MGP_NODShiLtJ_G0024585.1 mouse_genomes_project 19 3373590 3377250 + Ehd1 protein_coding retained_intron MGP_NODShiLtJ_T0050416.1 MGP_NODShiLtJ_G0024585.1 mouse_genomes_project 19 3377286 3377733 + Ehd1 protein_coding processed_transcript MGP_NODShiLtJ_T0051270.1 MGP_NODShiLtJ_G0024897.1 mouse_genomes_project 19 35733559 35735661 - MGP_NODShiLtJ_P0051270 protein_coding protein_coding MGP_NODShiLtJ_T0051271.1 MGP_NODShiLtJ_G0024897.1 mouse_genomes_project 19 35733562 35745267 - MGP_NODShiLtJ_P0051271 protein_coding protein_coding MGP_NODShiLtJ_T0050294.1 MGP_NODShiLtJ_G0024551.1 mouse_genomes_project 19 2711236 2724961 + MGP_NODShiLtJ_P0050294 Map3k11 protein_coding protein_coding MGP_NODShiLtJ_T0050894.1 MGP_NODShiLtJ_G0024724.1 mouse_genomes_project 19 9754848 9789401 + MGP_NODShiLtJ_P0050894 Patl1 protein_coding protein_coding MGP_NODShiLtJ_T0013282.1 MGP_NODShiLtJ_G0011390.1 mouse_genomes_project 19 62915824 62916205 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050276.1 MGP_NODShiLtJ_G0024547.1 mouse_genomes_project 19 2616658 2623732 - MGP_NODShiLtJ_P0050276 Kat5 protein_coding protein_coding MGP_NODShiLtJ_T0101781.1 MGP_NODShiLtJ_G0039949.1 mouse_genomes_project 19 34876647 34880446 - unprocessed_pseudogene unprocessed_pseudogene MGP_NODShiLtJ_T0050419.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432304 3438206 + MGP_NODShiLtJ_P0050419 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050420.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432304 3438217 + MGP_NODShiLtJ_P0050420 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050421.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432338 3438215 + MGP_NODShiLtJ_P0050421 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050422.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432364 3438215 + MGP_NODShiLtJ_P0050422 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050423.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432364 3438215 + MGP_NODShiLtJ_P0050423 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050424.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432371 3438217 + Men1 protein_coding retained_intron MGP_NODShiLtJ_T0050425.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432372 3438109 + MGP_NODShiLtJ_P0050425 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050426.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432389 3437789 + MGP_NODShiLtJ_P0050426 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050427.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432436 3438215 + MGP_NODShiLtJ_P0050427 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050428.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3432786 3437498 + MGP_NODShiLtJ_P0050428 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050429.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3434235 3435734 + MGP_NODShiLtJ_P0050429 Men1 protein_coding protein_coding MGP_NODShiLtJ_T0050430.1 MGP_NODShiLtJ_G0024587.1 mouse_genomes_project 19 3437172 3438138 + MGP_NODShiLtJ_P0050430 Men1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051886.1 MGP_NODShiLtJ_G0025105.1 mouse_genomes_project 19 60710423 60747213 - MGP_NODShiLtJ_P0051886 Ccdc186 protein_coding protein_coding MGP_NODShiLtJ_T0051887.1 MGP_NODShiLtJ_G0025105.1 mouse_genomes_project 19 60713473 60719167 - MGP_NODShiLtJ_P0051887 Ccdc186 protein_coding protein_coding MGP_NODShiLtJ_T0051888.1 MGP_NODShiLtJ_G0025105.1 mouse_genomes_project 19 60713905 60738707 - MGP_NODShiLtJ_P0051888 Ccdc186 protein_coding protein_coding MGP_NODShiLtJ_T0051889.1 MGP_NODShiLtJ_G0025105.1 mouse_genomes_project 19 60715904 60722516 - Ccdc186 protein_coding retained_intron MGP_NODShiLtJ_T0051890.1 MGP_NODShiLtJ_G0025105.1 mouse_genomes_project 19 60722356 60725994 - Ccdc186 protein_coding retained_intron MGP_NODShiLtJ_T0051891.1 MGP_NODShiLtJ_G0025105.1 mouse_genomes_project 19 60725046 60747213 - Ccdc186 protein_coding retained_intron MGP_NODShiLtJ_T0051896.1 MGP_NODShiLtJ_G0025107.1 mouse_genomes_project 19 60801069 60844462 + MGP_NODShiLtJ_P0051896 Vwa2 protein_coding protein_coding MGP_NODShiLtJ_T0050988.1 MGP_NODShiLtJ_G0024793.1 mouse_genomes_project 19 15656567 15658082 - MGP_NODShiLtJ_P0050988 Foxb2 protein_coding protein_coding MGP_NODShiLtJ_T0051992.1 MGP_NODShiLtJ_G0025139.1 mouse_genomes_project 19 65713367 65713533 - MGP_NODShiLtJ_P0051992 Gm21060 protein_coding protein_coding MGP_NODShiLtJ_T0010195.1 MGP_NODShiLtJ_G0008328.1 mouse_genomes_project 19 6119935 6120044 + Mir6992 miRNA miRNA MGP_NODShiLtJ_T0051253.1 MGP_NODShiLtJ_G0024888.1 mouse_genomes_project 19 35263485 35312125 + MGP_NODShiLtJ_P0051253 Stambpl1 protein_coding protein_coding MGP_NODShiLtJ_T0051254.1 MGP_NODShiLtJ_G0024888.1 mouse_genomes_project 19 35264078 35303234 + MGP_NODShiLtJ_P0051254 Stambpl1 protein_coding protein_coding MGP_NODShiLtJ_T0051255.1 MGP_NODShiLtJ_G0024888.1 mouse_genomes_project 19 35289235 35307654 + Stambpl1 protein_coding retained_intron MGP_NODShiLtJ_T0051256.1 MGP_NODShiLtJ_G0024888.1 mouse_genomes_project 19 35289425 35312123 + MGP_NODShiLtJ_P0051256 Stambpl1 protein_coding protein_coding MGP_NODShiLtJ_T0051257.1 MGP_NODShiLtJ_G0024888.1 mouse_genomes_project 19 35304497 35306091 + Stambpl1 protein_coding processed_transcript MGP_NODShiLtJ_T0050965.1 MGP_NODShiLtJ_G0024780.1 mouse_genomes_project 19 12122730 12123782 - MGP_NODShiLtJ_P0050965 Olfr1499 protein_coding protein_coding MGP_NODShiLtJ_T0051380.1 MGP_NODShiLtJ_G0024939.1 mouse_genomes_project 19 41386992 41438560 - MGP_NODShiLtJ_P0051380 protein_coding protein_coding MGP_NODShiLtJ_T0051327.1 MGP_NODShiLtJ_G0024914.1 mouse_genomes_project 19 38954985 39003508 + MGP_NODShiLtJ_P0051327 Kif11 protein_coding protein_coding MGP_NODShiLtJ_T0050739.1 MGP_NODShiLtJ_G0024667.1 mouse_genomes_project 19 7807795 7821778 + MGP_NODShiLtJ_P0050739 Fads1 protein_coding protein_coding MGP_NODShiLtJ_T0100325.1 MGP_NODShiLtJ_G0038719.1 mouse_genomes_project 19 21979715 21979813 - Gm22506 snoRNA snoRNA MGP_NODShiLtJ_T0010205.1 MGP_NODShiLtJ_G0008338.1 mouse_genomes_project 19 30866226 30866303 - Gm24108 miRNA miRNA MGP_NODShiLtJ_T0051741.1 MGP_NODShiLtJ_G0025057.1 mouse_genomes_project 19 49706298 49713369 - MGP_NODShiLtJ_P0051741 Usmg5 protein_coding protein_coding MGP_NODShiLtJ_T0050513.1 MGP_NODShiLtJ_G0024594.1 mouse_genomes_project 19 3957759 3970423 - MGP_NODShiLtJ_P0050513 Rps6ka4 protein_coding protein_coding MGP_NODShiLtJ_T0050903.1 MGP_NODShiLtJ_G0024733.1 mouse_genomes_project 19 10116594 10118841 + MGP_NODShiLtJ_P0050903 protein_coding protein_coding MGP_NODShiLtJ_T0051023.1 MGP_NODShiLtJ_G0024805.1 mouse_genomes_project 19 20149645 20195374 + MGP_NODShiLtJ_P0051023 Aldh1a1 protein_coding protein_coding MGP_NODShiLtJ_T0011366.1 MGP_NODShiLtJ_G0009499.1 mouse_genomes_project 19 15858044 15858305 - Gm27796 misc_RNA misc_RNA MGP_NODShiLtJ_T0051885.1 MGP_NODShiLtJ_G0025104.1 mouse_genomes_project 19 60636199 60638686 + MGP_NODShiLtJ_P0051885 Adrb1 protein_coding protein_coding MGP_NODShiLtJ_T0051268.1 MGP_NODShiLtJ_G0024896.1 mouse_genomes_project 19 35732527 35745266 - MGP_NODShiLtJ_P0051268 protein_coding protein_coding MGP_NODShiLtJ_T0051269.1 MGP_NODShiLtJ_G0024896.1 mouse_genomes_project 19 35732529 35769039 - MGP_NODShiLtJ_P0051269 protein_coding protein_coding MGP_NODShiLtJ_T0051074.1 MGP_NODShiLtJ_G0024830.1 mouse_genomes_project 19 24951490 25004527 - MGP_NODShiLtJ_P0051074 Cbwd1 protein_coding protein_coding MGP_NODShiLtJ_T0100336.1 MGP_NODShiLtJ_G0038730.1 mouse_genomes_project 19 60161180 60161308 - Gm22271 snoRNA snoRNA MGP_NODShiLtJ_T0050833.1 MGP_NODShiLtJ_G0024703.1 mouse_genomes_project 19 8982584 8992454 - Ms4a5 protein_coding retained_intron MGP_NODShiLtJ_T0050834.1 MGP_NODShiLtJ_G0024703.1 mouse_genomes_project 19 8983217 8997696 - MGP_NODShiLtJ_P0050834 Ms4a5 protein_coding protein_coding MGP_NODShiLtJ_T0050835.1 MGP_NODShiLtJ_G0024703.1 mouse_genomes_project 19 8983217 8997756 - MGP_NODShiLtJ_P0050835 Ms4a5 protein_coding protein_coding MGP_NODShiLtJ_T0050836.1 MGP_NODShiLtJ_G0024703.1 mouse_genomes_project 19 8983502 8992669 - Ms4a5 protein_coding processed_transcript MGP_NODShiLtJ_T0050837.1 MGP_NODShiLtJ_G0024703.1 mouse_genomes_project 19 8988467 8997743 - MGP_NODShiLtJ_P0050837 Ms4a5 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051134.1 MGP_NODShiLtJ_G0024844.1 mouse_genomes_project 19 29335475 29356728 - MGP_NODShiLtJ_P0051134 4430402I18Rik protein_coding protein_coding MGP_NODShiLtJ_T0051136.1 MGP_NODShiLtJ_G0024844.1 mouse_genomes_project 19 29345009 29414854 - MGP_NODShiLtJ_P0051136 4430402I18Rik protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051137.1 MGP_NODShiLtJ_G0024844.1 mouse_genomes_project 19 29368731 29411281 - MGP_NODShiLtJ_P0051137 4430402I18Rik protein_coding protein_coding MGP_NODShiLtJ_T0051138.1 MGP_NODShiLtJ_G0024844.1 mouse_genomes_project 19 29369197 29414924 - MGP_NODShiLtJ_P0051138 4430402I18Rik protein_coding protein_coding MGP_NODShiLtJ_T0051139.1 MGP_NODShiLtJ_G0024844.1 mouse_genomes_project 19 29369200 29374895 - 4430402I18Rik protein_coding processed_transcript MGP_NODShiLtJ_T0051140.1 MGP_NODShiLtJ_G0024844.1 mouse_genomes_project 19 29369355 29410715 - MGP_NODShiLtJ_P0051140 4430402I18Rik protein_coding protein_coding MGP_NODShiLtJ_T0051141.1 MGP_NODShiLtJ_G0024844.1 mouse_genomes_project 19 29369355 29410715 - MGP_NODShiLtJ_P0051141 4430402I18Rik protein_coding protein_coding MGP_NODShiLtJ_T0051142.1 MGP_NODShiLtJ_G0024844.1 mouse_genomes_project 19 29394475 29411035 - MGP_NODShiLtJ_P0051142 4430402I18Rik protein_coding protein_coding MGP_NODShiLtJ_T0050327.1 MGP_NODShiLtJ_G0024562.1 mouse_genomes_project 19 2952982 2960238 - MGP_NODShiLtJ_P0050327 Cdc42ep2 protein_coding protein_coding MGP_NODShiLtJ_T0051433.1 MGP_NODShiLtJ_G0024952.1 mouse_genomes_project 19 42933060 43002061 - MGP_NODShiLtJ_P0051433 Blnk protein_coding protein_coding MGP_NODShiLtJ_T0051434.1 MGP_NODShiLtJ_G0024952.1 mouse_genomes_project 19 42933060 43001674 - MGP_NODShiLtJ_P0051434 Blnk protein_coding protein_coding MGP_NODShiLtJ_T0051435.1 MGP_NODShiLtJ_G0024952.1 mouse_genomes_project 19 42972256 43002061 - Blnk protein_coding retained_intron MGP_NODShiLtJ_T0051981.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65386148 65488895 - MGP_NODShiLtJ_P0051981 Zfp950 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051982.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65460420 65488940 - MGP_NODShiLtJ_P0051982 Zfp950 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051983.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65461977 65462812 - Zfp950 protein_coding retained_intron MGP_NODShiLtJ_T0051984.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65462562 65488917 - MGP_NODShiLtJ_P0051984 Zfp950 protein_coding protein_coding MGP_NODShiLtJ_T0051985.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65462581 65488919 - MGP_NODShiLtJ_P0051985 Zfp950 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051986.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65462712 65488870 - MGP_NODShiLtJ_P0051986 Zfp950 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051987.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65463570 65488862 - MGP_NODShiLtJ_P0051987 Zfp950 protein_coding protein_coding MGP_NODShiLtJ_T0051988.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65464874 65465045 - MGP_NODShiLtJ_P0051988 Zfp950 protein_coding protein_coding MGP_NODShiLtJ_T0051989.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65470255 65488890 - MGP_NODShiLtJ_P0051989 Zfp950 protein_coding protein_coding MGP_NODShiLtJ_T0051990.1 MGP_NODShiLtJ_G0025137.1 mouse_genomes_project 19 65476276 65476852 - MGP_NODShiLtJ_P0051990 Zfp950 protein_coding protein_coding MGP_NODShiLtJ_T0051073.1 MGP_NODShiLtJ_G0024829.1 mouse_genomes_project 19 24937302 24939647 - MGP_NODShiLtJ_P0051073 Foxd4 protein_coding protein_coding MGP_NODShiLtJ_T0010218.1 MGP_NODShiLtJ_G0008351.1 mouse_genomes_project 19 46563337 46563398 + Mir5114 miRNA miRNA MGP_NODShiLtJ_T0050269.1 MGP_NODShiLtJ_G0024544.1 mouse_genomes_project 19 2546792 2558231 - MGP_NODShiLtJ_P0050269 Ovol1 protein_coding protein_coding MGP_NODShiLtJ_T0007042.1 MGP_NODShiLtJ_G0005774.1 mouse_genomes_project 19 47674205 47674742 + Gm29594 lincRNA lincRNA MGP_NODShiLtJ_T0007010.1 MGP_NODShiLtJ_G0005751.1 mouse_genomes_project 19 9224082 9225888 + Gm37387 lincRNA lincRNA MGP_NODShiLtJ_T0051354.1 MGP_NODShiLtJ_G0024927.1 mouse_genomes_project 19 40175423 40225586 + Plce1 protein_coding processed_transcript MGP_NODShiLtJ_T0051355.1 MGP_NODShiLtJ_G0024927.1 mouse_genomes_project 19 40175435 40508190 + MGP_NODShiLtJ_P0051355 Plce1 protein_coding protein_coding MGP_NODShiLtJ_T0051356.1 MGP_NODShiLtJ_G0024927.1 mouse_genomes_project 19 40225716 40509820 + MGP_NODShiLtJ_P0051356 Plce1 protein_coding protein_coding MGP_NODShiLtJ_T0051357.1 MGP_NODShiLtJ_G0024927.1 mouse_genomes_project 19 40225728 40507555 + MGP_NODShiLtJ_P0051357 Plce1 protein_coding protein_coding MGP_NODShiLtJ_T0051358.1 MGP_NODShiLtJ_G0024927.1 mouse_genomes_project 19 40292281 40364281 + MGP_NODShiLtJ_P0051358 Plce1 protein_coding protein_coding MGP_NODShiLtJ_T0051359.1 MGP_NODShiLtJ_G0024927.1 mouse_genomes_project 19 40441045 40508348 + Plce1 protein_coding retained_intron MGP_NODShiLtJ_T0051360.1 MGP_NODShiLtJ_G0024927.1 mouse_genomes_project 19 40456688 40473995 + Plce1 protein_coding retained_intron MGP_NODShiLtJ_T0051953.1 MGP_NODShiLtJ_G0025123.1 mouse_genomes_project 19 63380207 63397926 + MGP_NODShiLtJ_P0051953 Kcnk18 protein_coding protein_coding MGP_NODShiLtJ_T0007056.1 MGP_NODShiLtJ_G0005783.1 mouse_genomes_project 19 61274761 61320169 - B230217O12Rik lincRNA lincRNA MGP_NODShiLtJ_T0050902.1 MGP_NODShiLtJ_G0024732.1 mouse_genomes_project 19 10116524 10118906 + MGP_NODShiLtJ_P0050902 protein_coding protein_coding MGP_NODShiLtJ_T0050820.1 MGP_NODShiLtJ_G0024698.1 mouse_genomes_project 19 8801032 8836457 - MGP_NODShiLtJ_P0050820 1700017D01Rik protein_coding protein_coding MGP_NODShiLtJ_T0050821.1 MGP_NODShiLtJ_G0024698.1 mouse_genomes_project 19 8814249 8816728 - 1700017D01Rik protein_coding retained_intron MGP_NODShiLtJ_T0003785.1 MGP_NODShiLtJ_G0003391.1 mouse_genomes_project 19 863642 864117 - Gm16312 antisense antisense MGP_NODShiLtJ_T0013273.1 MGP_NODShiLtJ_G0011381.1 mouse_genomes_project 19 29250622 29251419 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0007051.1 MGP_NODShiLtJ_G0005780.1 mouse_genomes_project 19 57062659 57087264 - Mirt1 lincRNA lincRNA MGP_NODShiLtJ_T0007052.1 MGP_NODShiLtJ_G0005780.1 mouse_genomes_project 19 57065450 57068751 - Mirt1 lincRNA lincRNA MGP_NODShiLtJ_T0007053.1 MGP_NODShiLtJ_G0005780.1 mouse_genomes_project 19 57074085 57076574 - Mirt1 lincRNA lincRNA MGP_NODShiLtJ_T0010198.1 MGP_NODShiLtJ_G0008331.1 mouse_genomes_project 19 7816282 7816347 + Mir6993 miRNA miRNA MGP_NODShiLtJ_T0051085.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26800350 26993279 + MGP_NODShiLtJ_P0051085 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051086.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26800354 26993233 + MGP_NODShiLtJ_P0051086 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051087.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26803462 26993231 + MGP_NODShiLtJ_P0051087 Smarca2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051088.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26819558 26992327 + MGP_NODShiLtJ_P0051088 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051089.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26823201 26830817 + MGP_NODShiLtJ_P0051089 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051090.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26874119 26881486 + Smarca2 protein_coding retained_intron MGP_NODShiLtJ_T0051091.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26883916 26966908 + Smarca2 protein_coding processed_transcript MGP_NODShiLtJ_T0051092.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26927878 26986710 + Smarca2 protein_coding retained_intron MGP_NODShiLtJ_T0051093.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26933711 26966948 + Smarca2 protein_coding processed_transcript MGP_NODShiLtJ_T0051094.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26962676 26992433 + MGP_NODShiLtJ_P0051094 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051095.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26962830 26992327 + MGP_NODShiLtJ_P0051095 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051096.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26962865 26991199 + MGP_NODShiLtJ_P0051096 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051097.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26962866 26992327 + MGP_NODShiLtJ_P0051097 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051098.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26962866 26993231 + MGP_NODShiLtJ_P0051098 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051099.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26964626 26989262 + MGP_NODShiLtJ_P0051099 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051100.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26965918 26985952 + MGP_NODShiLtJ_P0051100 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051101.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26966920 26993279 + MGP_NODShiLtJ_P0051101 Smarca2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051102.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26968549 26992608 + MGP_NODShiLtJ_P0051102 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051103.1 MGP_NODShiLtJ_G0024836.1 mouse_genomes_project 19 26985455 26992389 + MGP_NODShiLtJ_P0051103 Smarca2 protein_coding protein_coding MGP_NODShiLtJ_T0051930.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62293664 62545911 - MGP_NODShiLtJ_P0051930 Gfra1 protein_coding protein_coding MGP_NODShiLtJ_T0051931.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62293672 62545105 - MGP_NODShiLtJ_P0051931 Gfra1 protein_coding protein_coding MGP_NODShiLtJ_T0051932.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62294752 62544979 - MGP_NODShiLtJ_P0051932 Gfra1 protein_coding protein_coding MGP_NODShiLtJ_T0051933.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62296222 62545814 - MGP_NODShiLtJ_P0051933 Gfra1 protein_coding protein_coding MGP_NODShiLtJ_T0051934.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62296222 62545872 - MGP_NODShiLtJ_P0051934 Gfra1 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051935.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62543847 62545519 - MGP_NODShiLtJ_P0051935 Gfra1 protein_coding protein_coding MGP_NODShiLtJ_T0051936.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62543864 62546422 - MGP_NODShiLtJ_P0051936 Gfra1 protein_coding protein_coding MGP_NODShiLtJ_T0051937.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62543933 62545133 - MGP_NODShiLtJ_P0051937 Gfra1 protein_coding protein_coding MGP_NODShiLtJ_T0051938.1 MGP_NODShiLtJ_G0025113.1 mouse_genomes_project 19 62544836 62545674 - MGP_NODShiLtJ_P0051938 Gfra1 protein_coding protein_coding MGP_NODShiLtJ_T0101094.1 MGP_NODShiLtJ_G0039444.1 mouse_genomes_project 19 10751922 10752664 + transcribed_processed_pseudogene processed_transcript MGP_NODShiLtJ_T0101095.1 MGP_NODShiLtJ_G0039444.1 mouse_genomes_project 19 10752106 10752444 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_NODShiLtJ_T0013252.1 MGP_NODShiLtJ_G0011360.1 mouse_genomes_project 19 4894469 4894976 + processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0100329.1 MGP_NODShiLtJ_G0038723.1 mouse_genomes_project 19 36412522 36412654 + Gm24006 snoRNA snoRNA MGP_NODShiLtJ_T0051276.1 MGP_NODShiLtJ_G0024901.1 mouse_genomes_project 19 36083491 36161007 + MGP_NODShiLtJ_P0051276 Kif20b protein_coding protein_coding MGP_NODShiLtJ_T0050343.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3121506 3126536 - MGP_NODShiLtJ_P0050343 Tm7sf2 protein_coding protein_coding MGP_NODShiLtJ_T0050344.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3121506 3126497 - MGP_NODShiLtJ_P0050344 Tm7sf2 protein_coding protein_coding MGP_NODShiLtJ_T0050345.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3121507 3126536 - MGP_NODShiLtJ_P0050345 Tm7sf2 protein_coding protein_coding MGP_NODShiLtJ_T0050346.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3121586 3126497 - MGP_NODShiLtJ_P0050346 Tm7sf2 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050347.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3121663 3126502 - MGP_NODShiLtJ_P0050347 Tm7sf2 protein_coding protein_coding MGP_NODShiLtJ_T0050348.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3122507 3126479 - MGP_NODShiLtJ_P0050348 Tm7sf2 protein_coding protein_coding MGP_NODShiLtJ_T0050349.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3122778 3126502 - MGP_NODShiLtJ_P0050349 Tm7sf2 protein_coding protein_coding MGP_NODShiLtJ_T0050350.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3124218 3126470 - Tm7sf2 protein_coding retained_intron MGP_NODShiLtJ_T0050351.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3124820 3126544 - Tm7sf2 protein_coding retained_intron MGP_NODShiLtJ_T0050352.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3124837 3126561 - Tm7sf2 protein_coding retained_intron MGP_NODShiLtJ_T0050353.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3124876 3125786 - Tm7sf2 protein_coding retained_intron MGP_NODShiLtJ_T0050354.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3124878 3126549 - MGP_NODShiLtJ_P0050354 Tm7sf2 protein_coding protein_coding MGP_NODShiLtJ_T0050355.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3125270 3126255 - Tm7sf2 protein_coding retained_intron MGP_NODShiLtJ_T0050356.1 MGP_NODShiLtJ_G0024570.1 mouse_genomes_project 19 3125856 3127067 - MGP_NODShiLtJ_P0050356 Tm7sf2 protein_coding protein_coding MGP_NODShiLtJ_T0051771.1 MGP_NODShiLtJ_G0025069.1 mouse_genomes_project 19 50405969 50521429 - MGP_NODShiLtJ_P0051771 Cfap43 protein_coding protein_coding MGP_NODShiLtJ_T0051772.1 MGP_NODShiLtJ_G0025069.1 mouse_genomes_project 19 50406014 50434948 - Cfap43 protein_coding processed_transcript MGP_NODShiLtJ_T0051773.1 MGP_NODShiLtJ_G0025069.1 mouse_genomes_project 19 50406014 50434948 - Cfap43 protein_coding processed_transcript MGP_NODShiLtJ_T0051774.1 MGP_NODShiLtJ_G0025069.1 mouse_genomes_project 19 50423555 50434956 - Cfap43 protein_coding processed_transcript MGP_NODShiLtJ_T0051775.1 MGP_NODShiLtJ_G0025069.1 mouse_genomes_project 19 50460722 50605235 - Cfap43 protein_coding retained_intron MGP_NODShiLtJ_T0051776.1 MGP_NODShiLtJ_G0025069.1 mouse_genomes_project 19 50473380 50492591 - Cfap43 protein_coding processed_transcript MGP_NODShiLtJ_T0051777.1 MGP_NODShiLtJ_G0025069.1 mouse_genomes_project 19 50506465 50521408 - Cfap43 protein_coding retained_intron MGP_NODShiLtJ_T0051783.1 MGP_NODShiLtJ_G0025069.1 mouse_genomes_project 19 50579841 50605247 - MGP_NODShiLtJ_P0051783 Cfap43 protein_coding protein_coding MGP_NODShiLtJ_T0051808.1 MGP_NODShiLtJ_G0025080.1 mouse_genomes_project 19 56954898 56955099 - MGP_NODShiLtJ_P0051808 Gm10197 protein_coding protein_coding MGP_NODShiLtJ_T0003786.1 MGP_NODShiLtJ_G0003392.1 mouse_genomes_project 19 1730130 1734403 + Gm21844 antisense antisense MGP_NODShiLtJ_T0007059.1 MGP_NODShiLtJ_G0005786.1 mouse_genomes_project 19 64096737 64101578 - Gm17203 lincRNA lincRNA MGP_NODShiLtJ_T0050958.1 MGP_NODShiLtJ_G0024773.1 mouse_genomes_project 19 11903407 11904349 + MGP_NODShiLtJ_P0050958 Olfr1489 protein_coding protein_coding MGP_NODShiLtJ_T0051258.1 MGP_NODShiLtJ_G0024889.1 mouse_genomes_project 19 35312880 35327130 - MGP_NODShiLtJ_P0051258 Acta2 protein_coding protein_coding MGP_NODShiLtJ_T0050278.1 MGP_NODShiLtJ_G0024549.1 mouse_genomes_project 19 2670406 2683808 - MGP_NODShiLtJ_P0050278 Sipa1 protein_coding protein_coding MGP_NODShiLtJ_T0050279.1 MGP_NODShiLtJ_G0024549.1 mouse_genomes_project 19 2670406 2683808 - MGP_NODShiLtJ_P0050279 Sipa1 protein_coding protein_coding MGP_NODShiLtJ_T0050280.1 MGP_NODShiLtJ_G0024549.1 mouse_genomes_project 19 2670406 2683808 - MGP_NODShiLtJ_P0050280 Sipa1 protein_coding protein_coding MGP_NODShiLtJ_T0050281.1 MGP_NODShiLtJ_G0024549.1 mouse_genomes_project 19 2670406 2683808 - MGP_NODShiLtJ_P0050281 Sipa1 protein_coding protein_coding MGP_NODShiLtJ_T0050099.1 MGP_NODShiLtJ_G0024484.1 mouse_genomes_project 19 1067616 1074306 - MGP_NODShiLtJ_P0050099 Tbc1d10c protein_coding protein_coding MGP_NODShiLtJ_T0050177.1 MGP_NODShiLtJ_G0024509.1 mouse_genomes_project 19 1817790 1824494 + Zdhhc24 protein_coding processed_transcript MGP_NODShiLtJ_T0050178.1 MGP_NODShiLtJ_G0024509.1 mouse_genomes_project 19 1817794 1824494 + MGP_NODShiLtJ_P0050178 Zdhhc24 protein_coding protein_coding MGP_NODShiLtJ_T0050179.1 MGP_NODShiLtJ_G0024509.1 mouse_genomes_project 19 1817812 1824492 + Zdhhc24 protein_coding processed_transcript MGP_NODShiLtJ_T0050180.1 MGP_NODShiLtJ_G0024509.1 mouse_genomes_project 19 1817826 1824493 + MGP_NODShiLtJ_P0050180 Zdhhc24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050181.1 MGP_NODShiLtJ_G0024509.1 mouse_genomes_project 19 1817845 1822878 + MGP_NODShiLtJ_P0050181 Zdhhc24 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050182.1 MGP_NODShiLtJ_G0024509.1 mouse_genomes_project 19 1818890 1822861 + Zdhhc24 protein_coding processed_transcript MGP_NODShiLtJ_T0050915.1 MGP_NODShiLtJ_G0024743.1 mouse_genomes_project 19 10477929 10508427 + MGP_NODShiLtJ_P0050915 Gm4952 protein_coding protein_coding MGP_NODShiLtJ_T0050916.1 MGP_NODShiLtJ_G0024743.1 mouse_genomes_project 19 10477971 10509805 + MGP_NODShiLtJ_P0050916 Gm4952 protein_coding protein_coding MGP_NODShiLtJ_T0050392.1 MGP_NODShiLtJ_G0024579.1 mouse_genomes_project 19 3202878 3210617 - Arl2 protein_coding retained_intron MGP_NODShiLtJ_T0050393.1 MGP_NODShiLtJ_G0024579.1 mouse_genomes_project 19 3202887 3210883 - MGP_NODShiLtJ_P0050393 Arl2 protein_coding protein_coding MGP_NODShiLtJ_T0050394.1 MGP_NODShiLtJ_G0024579.1 mouse_genomes_project 19 3205974 3206665 - Arl2 protein_coding retained_intron MGP_NODShiLtJ_T0006995.1 MGP_NODShiLtJ_G0005742.1 mouse_genomes_project 19 2081062 2082143 + Gm28901 lincRNA lincRNA MGP_NODShiLtJ_T0051203.1 MGP_NODShiLtJ_G0024866.1 mouse_genomes_project 19 31234296 32543741 - MGP_NODShiLtJ_P0051203 Prkg1 protein_coding protein_coding MGP_NODShiLtJ_T0051204.1 MGP_NODShiLtJ_G0024866.1 mouse_genomes_project 19 31235292 32443007 - MGP_NODShiLtJ_P0051204 Prkg1 protein_coding protein_coding MGP_NODShiLtJ_T0051205.1 MGP_NODShiLtJ_G0024866.1 mouse_genomes_project 19 31235706 31241448 - Prkg1 protein_coding processed_transcript MGP_NODShiLtJ_T0051206.1 MGP_NODShiLtJ_G0024866.1 mouse_genomes_project 19 31235708 31241448 - Prkg1 protein_coding processed_transcript MGP_NODShiLtJ_T0051207.1 MGP_NODShiLtJ_G0024866.1 mouse_genomes_project 19 31300010 31306188 - Prkg1 protein_coding processed_transcript MGP_NODShiLtJ_T0051208.1 MGP_NODShiLtJ_G0024866.1 mouse_genomes_project 19 31386323 31475947 - Prkg1 protein_coding retained_intron MGP_NODShiLtJ_T0051210.1 MGP_NODShiLtJ_G0024866.1 mouse_genomes_project 19 32519313 32543681 - MGP_NODShiLtJ_P0051210 Prkg1 protein_coding protein_coding MGP_NODShiLtJ_T0010200.1 MGP_NODShiLtJ_G0008333.1 mouse_genomes_project 19 14991826 14991939 - Mir496b miRNA miRNA MGP_NODShiLtJ_T0051334.1 MGP_NODShiLtJ_G0024920.1 mouse_genomes_project 19 39694905 39713849 + MGP_NODShiLtJ_P0051334 Cep55 protein_coding protein_coding MGP_NODShiLtJ_T0051335.1 MGP_NODShiLtJ_G0024920.1 mouse_genomes_project 19 39694920 39712922 + MGP_NODShiLtJ_P0051335 Cep55 protein_coding protein_coding MGP_NODShiLtJ_T0051336.1 MGP_NODShiLtJ_G0024920.1 mouse_genomes_project 19 39694922 39713849 + MGP_NODShiLtJ_P0051336 Cep55 protein_coding protein_coding MGP_NODShiLtJ_T0010217.1 MGP_NODShiLtJ_G0008350.1 mouse_genomes_project 19 45829636 45829767 + Gm22646 miRNA miRNA MGP_NODShiLtJ_T0050728.1 MGP_NODShiLtJ_G0024660.1 mouse_genomes_project 19 7437295 7442540 + MGP_NODShiLtJ_P0050728 Scgb2a2 protein_coding protein_coding MGP_NODShiLtJ_T0010197.1 MGP_NODShiLtJ_G0008330.1 mouse_genomes_project 19 7445060 7445164 + Gm22369 miRNA miRNA MGP_NODShiLtJ_T0050384.1 MGP_NODShiLtJ_G0024577.1 mouse_genomes_project 19 3184031 3186614 - MGP_NODShiLtJ_P0050384 Sac3d1 protein_coding protein_coding MGP_NODShiLtJ_T0013249.1 MGP_NODShiLtJ_G0011357.1 mouse_genomes_project 19 2403087 2403282 - processed_pseudogene processed_pseudogene MGP_NODShiLtJ_T0050808.1 MGP_NODShiLtJ_G0024693.1 mouse_genomes_project 19 8630782 8636634 - Ccdc86 protein_coding processed_transcript MGP_NODShiLtJ_T0050809.1 MGP_NODShiLtJ_G0024693.1 mouse_genomes_project 19 8630782 8638508 - MGP_NODShiLtJ_P0050809 Ccdc86 protein_coding protein_coding MGP_NODShiLtJ_T0050810.1 MGP_NODShiLtJ_G0024693.1 mouse_genomes_project 19 8634808 8638493 - Ccdc86 protein_coding retained_intron MGP_NODShiLtJ_T0010231.1 MGP_NODShiLtJ_G0008364.1 mouse_genomes_project 19 65089025 65089094 - Mir3084-2 miRNA miRNA MGP_NODShiLtJ_T0051746.1 MGP_NODShiLtJ_G0025061.1 mouse_genomes_project 19 49782529 49788426 - MGP_NODShiLtJ_P0051746 Calhm3 protein_coding protein_coding MGP_NODShiLtJ_T0050697.1 MGP_NODShiLtJ_G0024649.1 mouse_genomes_project 19 6283315 6291839 + MGP_NODShiLtJ_P0050697 Ints5 protein_coding protein_coding MGP_NODShiLtJ_T0050703.1 MGP_NODShiLtJ_G0024649.1 mouse_genomes_project 19 6287390 6292087 + Ints5 protein_coding processed_transcript MGP_NODShiLtJ_T0050704.1 MGP_NODShiLtJ_G0024649.1 mouse_genomes_project 19 6289848 6294750 + MGP_NODShiLtJ_P0050704 Ints5 protein_coding protein_coding MGP_NODShiLtJ_T0051429.1 MGP_NODShiLtJ_G0024950.1 mouse_genomes_project 19 42831320 42849717 + MGP_NODShiLtJ_P0051429 Ccnj protein_coding protein_coding MGP_NODShiLtJ_T0051430.1 MGP_NODShiLtJ_G0024950.1 mouse_genomes_project 19 42831320 42849717 + MGP_NODShiLtJ_P0051430 Ccnj protein_coding protein_coding MGP_NODShiLtJ_T0051431.1 MGP_NODShiLtJ_G0024950.1 mouse_genomes_project 19 42831349 42849154 + MGP_NODShiLtJ_P0051431 Ccnj protein_coding protein_coding MGP_NODShiLtJ_T0007035.1 MGP_NODShiLtJ_G0005768.1 mouse_genomes_project 19 42573663 42579092 + Gm27042 lincRNA lincRNA MGP_NODShiLtJ_T0051083.1 MGP_NODShiLtJ_G0024834.1 mouse_genomes_project 19 25703913 25717302 + MGP_NODShiLtJ_P0051083 Dmrt3 protein_coding protein_coding MGP_NODShiLtJ_T0050981.1 MGP_NODShiLtJ_G0024789.1 mouse_genomes_project 19 14598627 14627800 - MGP_NODShiLtJ_P0050981 Cep78 protein_coding protein_coding MGP_NODShiLtJ_T0050956.1 MGP_NODShiLtJ_G0024771.1 mouse_genomes_project 19 11594976 11595921 - MGP_NODShiLtJ_P0050956 Olfr1472 protein_coding protein_coding MGP_NODShiLtJ_T0099086.1 MGP_NODShiLtJ_G0037480.1 mouse_genomes_project 19 65527528 65527644 - Gm22365 snRNA snRNA MGP_NODShiLtJ_T0051482.1 MGP_NODShiLtJ_G0024969.1 mouse_genomes_project 19 44054683 44116114 + MGP_NODShiLtJ_P0051482 Ubtd1 protein_coding protein_coding MGP_NODShiLtJ_T0051056.1 MGP_NODShiLtJ_G0024819.1 mouse_genomes_project 19 23598418 23637233 + MGP_NODShiLtJ_P0051056 Ptar1 protein_coding protein_coding MGP_NODShiLtJ_T0050964.1 MGP_NODShiLtJ_G0024779.1 mouse_genomes_project 19 12100427 12101372 - MGP_NODShiLtJ_P0050964 Olfr1497 protein_coding protein_coding MGP_NODShiLtJ_T0003798.1 MGP_NODShiLtJ_G0003398.1 mouse_genomes_project 19 3656461 3657590 - Gm14967 antisense antisense MGP_NODShiLtJ_T0099064.1 MGP_NODShiLtJ_G0037458.1 mouse_genomes_project 19 10548614 10548721 + Gm24521 snRNA snRNA MGP_NODShiLtJ_T0051612.1 MGP_NODShiLtJ_G0025017.1 mouse_genomes_project 19 47362974 47366072 - Pdzd7 protein_coding processed_transcript MGP_NODShiLtJ_T0051613.1 MGP_NODShiLtJ_G0025017.1 mouse_genomes_project 19 47362975 47384999 - MGP_NODShiLtJ_P0051613 Pdzd7 protein_coding protein_coding MGP_NODShiLtJ_T0051614.1 MGP_NODShiLtJ_G0025017.1 mouse_genomes_project 19 47362975 47384157 - MGP_NODShiLtJ_P0051614 Pdzd7 protein_coding protein_coding MGP_NODShiLtJ_T0050405.1 MGP_NODShiLtJ_G0024583.1 mouse_genomes_project 19 3302203 3310311 - MGP_NODShiLtJ_P0050405 Ppp2r5b protein_coding protein_coding MGP_NODShiLtJ_T0050406.1 MGP_NODShiLtJ_G0024583.1 mouse_genomes_project 19 3303723 3304918 - Ppp2r5b protein_coding retained_intron MGP_NODShiLtJ_T0050407.1 MGP_NODShiLtJ_G0024583.1 mouse_genomes_project 19 3308375 3310282 - Ppp2r5b protein_coding processed_transcript MGP_NODShiLtJ_T0050770.1 MGP_NODShiLtJ_G0024679.1 mouse_genomes_project 19 8234061 8245987 + MGP_NODShiLtJ_P0050770 Cyb561a3 protein_coding unknown_likely_coding MGP_NODShiLtJ_T0050771.1 MGP_NODShiLtJ_G0024679.1 mouse_genomes_project 19 8234063 8244700 + MGP_NODShiLtJ_P0050771 Cyb561a3 protein_coding protein_coding MGP_NODShiLtJ_T0051031.1 MGP_NODShiLtJ_G0024809.1 mouse_genomes_project 19 21039213 21127661 - MGP_NODShiLtJ_P0051031 Gda protein_coding protein_coding MGP_NODShiLtJ_T0051032.1 MGP_NODShiLtJ_G0024809.1 mouse_genomes_project 19 21067474 21127759 - Gda protein_coding retained_intron MGP_NODShiLtJ_T0100309.1 MGP_NODShiLtJ_G0038703.1 mouse_genomes_project 19 954097 954313 - Gm23927 snoRNA snoRNA MGP_NODShiLtJ_T0100316.1 MGP_NODShiLtJ_G0038710.1 mouse_genomes_project 19 6102085 6102154 + Gm22680 snoRNA snoRNA MGP_NODShiLtJ_T0050761.1 MGP_NODShiLtJ_G0024673.1 mouse_genomes_project 19 8092294 8094350 - MGP_NODShiLtJ_P0050761 Lrrc10b protein_coding protein_coding MGP_NODShiLtJ_T0051834.1 MGP_NODShiLtJ_G0025093.1 mouse_genomes_project 19 58999199 59042795 - MGP_NODShiLtJ_P0051834 Gucy2g protein_coding protein_coding MGP_NODShiLtJ_T0051115.1 MGP_NODShiLtJ_G0024841.1 mouse_genomes_project 19 28055779 28263266 - MGP_NODShiLtJ_P0051115 Rfx3 protein_coding protein_coding MGP_NODShiLtJ_T0051116.1 MGP_NODShiLtJ_G0024841.1 mouse_genomes_project 19 28060079 28148058 - Rfx3 protein_coding processed_transcript MGP_NODShiLtJ_T0051117.1 MGP_NODShiLtJ_G0024841.1 mouse_genomes_project 19 28060393 28235689 - MGP_NODShiLtJ_P0051117 Rfx3 protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051118.1 MGP_NODShiLtJ_G0024841.1 mouse_genomes_project 19 28099683 28374819 - Rfx3 protein_coding retained_intron MGP_NODShiLtJ_T0051119.1 MGP_NODShiLtJ_G0024841.1 mouse_genomes_project 19 28195596 28374512 - MGP_NODShiLtJ_P0051119 Rfx3 protein_coding protein_coding MGP_NODShiLtJ_T0050234.1 MGP_NODShiLtJ_G0024535.1 mouse_genomes_project 19 2413370 2415530 + AI837181 protein_coding processed_transcript MGP_NODShiLtJ_T0050235.1 MGP_NODShiLtJ_G0024535.1 mouse_genomes_project 19 2413370 2415530 + MGP_NODShiLtJ_P0050235 AI837181 protein_coding protein_coding MGP_NODShiLtJ_T0050535.1 MGP_NODShiLtJ_G0024602.1 mouse_genomes_project 19 4081674 4094511 + MGP_NODShiLtJ_P0050535 Bad protein_coding protein_coding MGP_NODShiLtJ_T0050536.1 MGP_NODShiLtJ_G0024602.1 mouse_genomes_project 19 4082136 4094505 + MGP_NODShiLtJ_P0050536 Bad protein_coding protein_coding MGP_NODShiLtJ_T0050537.1 MGP_NODShiLtJ_G0024602.1 mouse_genomes_project 19 4082314 4094506 + MGP_NODShiLtJ_P0050537 Bad protein_coding protein_coding MGP_NODShiLtJ_T0050538.1 MGP_NODShiLtJ_G0024602.1 mouse_genomes_project 19 4082692 4093865 + MGP_NODShiLtJ_P0050538 Bad protein_coding protein_coding MGP_NODShiLtJ_T0050539.1 MGP_NODShiLtJ_G0024602.1 mouse_genomes_project 19 4093379 4094487 + MGP_NODShiLtJ_P0050539 Bad protein_coding protein_coding MGP_NODShiLtJ_T0051750.1 MGP_NODShiLtJ_G0025064.1 mouse_genomes_project 19 49902385 50117149 - MGP_NODShiLtJ_P0051750 Sh3pxd2a protein_coding protein_coding MGP_NODShiLtJ_T0051751.1 MGP_NODShiLtJ_G0025064.1 mouse_genomes_project 19 49902385 50117149 - MGP_NODShiLtJ_P0051751 Sh3pxd2a protein_coding protein_coding MGP_NODShiLtJ_T0100315.1 MGP_NODShiLtJ_G0038709.1 mouse_genomes_project 19 6101836 6101901 + Gm22744 snoRNA snoRNA MGP_NODShiLtJ_T0099076.1 MGP_NODShiLtJ_G0037470.1 mouse_genomes_project 19 38786325 38786428 - Gm25268 snRNA snRNA MGP_NODShiLtJ_T0051585.1 MGP_NODShiLtJ_G0025007.1 mouse_genomes_project 19 46806606 46837113 - MGP_NODShiLtJ_P0051585 Sec31b protein_coding protein_coding MGP_NODShiLtJ_T0051586.1 MGP_NODShiLtJ_G0025007.1 mouse_genomes_project 19 46806940 46837083 - MGP_NODShiLtJ_P0051586 Sec31b protein_coding protein_coding MGP_NODShiLtJ_T0051587.1 MGP_NODShiLtJ_G0025007.1 mouse_genomes_project 19 46807280 46810545 - MGP_NODShiLtJ_P0051587 Sec31b protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0010189.1 MGP_NODShiLtJ_G0008322.1 mouse_genomes_project 19 3341797 3341886 + Mir192 miRNA miRNA MGP_NODShiLtJ_T0051241.1 MGP_NODShiLtJ_G0024880.1 mouse_genomes_project 19 34618813 34657060 - MGP_NODShiLtJ_P0051241 Lipo1 protein_coding protein_coding MGP_NODShiLtJ_T0017510.1 MGP_NODShiLtJ_G0015242.1 mouse_genomes_project 19 617887 693339 - Gm16066 processed_transcript processed_transcript MGP_NODShiLtJ_T0050726.1 MGP_NODShiLtJ_G0024659.1 mouse_genomes_project 19 6515988 6553357 - MGP_NODShiLtJ_P0050726 Asrgl1 protein_coding protein_coding MGP_NODShiLtJ_T0050727.1 MGP_NODShiLtJ_G0024659.1 mouse_genomes_project 19 6544819 6553252 - Asrgl1 protein_coding processed_transcript MGP_NODShiLtJ_T0007007.1 MGP_NODShiLtJ_G0005748.1 mouse_genomes_project 19 8725358 8729564 - lincRNA lincRNA MGP_NODShiLtJ_T0010206.1 MGP_NODShiLtJ_G0008339.1 mouse_genomes_project 19 34093331 34093421 + Mir3970 miRNA miRNA MGP_NODShiLtJ_T0051969.1 MGP_NODShiLtJ_G0025133.1 mouse_genomes_project 19 65127527 65149845 + MGP_NODShiLtJ_P0051969 Fam45a protein_coding protein_coding MGP_NODShiLtJ_T0051970.1 MGP_NODShiLtJ_G0025133.1 mouse_genomes_project 19 65127554 65146101 + MGP_NODShiLtJ_P0051970 Fam45a protein_coding protein_coding MGP_NODShiLtJ_T0051971.1 MGP_NODShiLtJ_G0025133.1 mouse_genomes_project 19 65127560 65151063 + MGP_NODShiLtJ_P0051971 Fam45a protein_coding protein_coding MGP_NODShiLtJ_T0051972.1 MGP_NODShiLtJ_G0025133.1 mouse_genomes_project 19 65127565 65134181 + Fam45a protein_coding retained_intron MGP_NODShiLtJ_T0051973.1 MGP_NODShiLtJ_G0025133.1 mouse_genomes_project 19 65127580 65138149 + MGP_NODShiLtJ_P0051973 Fam45a protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0051974.1 MGP_NODShiLtJ_G0025133.1 mouse_genomes_project 19 65128000 65130551 + Fam45a protein_coding processed_transcript MGP_NODShiLtJ_T0051975.1 MGP_NODShiLtJ_G0025133.1 mouse_genomes_project 19 65145786 65149956 + Fam45a protein_coding retained_intron MGP_NODShiLtJ_T0050169.1 MGP_NODShiLtJ_G0024504.1 mouse_genomes_project 19 1729187 1741615 - MGP_NODShiLtJ_P0050169 Rbm14 protein_coding protein_coding MGP_NODShiLtJ_T0050170.1 MGP_NODShiLtJ_G0024504.1 mouse_genomes_project 19 1729540 1741566 - MGP_NODShiLtJ_P0050170 Rbm14 protein_coding protein_coding MGP_NODShiLtJ_T0050171.1 MGP_NODShiLtJ_G0024504.1 mouse_genomes_project 19 1730395 1741493 - MGP_NODShiLtJ_P0050171 Rbm14 protein_coding protein_coding MGP_NODShiLtJ_T0050109.1 MGP_NODShiLtJ_G0024490.1 mouse_genomes_project 19 1159210 1176450 - MGP_NODShiLtJ_P0050109 Ankrd13d protein_coding protein_coding MGP_NODShiLtJ_T0050110.1 MGP_NODShiLtJ_G0024490.1 mouse_genomes_project 19 1159210 1177410 - MGP_NODShiLtJ_P0050110 Ankrd13d protein_coding protein_coding MGP_NODShiLtJ_T0050111.1 MGP_NODShiLtJ_G0024490.1 mouse_genomes_project 19 1159212 1177412 - MGP_NODShiLtJ_P0050111 Ankrd13d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050112.1 MGP_NODShiLtJ_G0024490.1 mouse_genomes_project 19 1159428 1160325 - MGP_NODShiLtJ_P0050112 Ankrd13d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050113.1 MGP_NODShiLtJ_G0024490.1 mouse_genomes_project 19 1161651 1175286 - MGP_NODShiLtJ_P0050113 Ankrd13d protein_coding nonsense_mediated_decay MGP_NODShiLtJ_T0050114.1 MGP_NODShiLtJ_G0024490.1 mouse_genomes_project 19 1173740 1177412 - Ankrd13d protein_coding processed_transcript MGP_NODShiLtJ_T0050115.1 MGP_NODShiLtJ_G0024490.1 mouse_genomes_project 19 1174920 1177308 - MGP_NODShiLtJ_P0050115 Ankrd13d protein_coding protein_coding MGP_NODShiLtJ_T0051835.1 MGP_NODShiLtJ_G0025094.1 mouse_genomes_project 19 59056070 59099827 + MGP_NODShiLtJ_P0051835 Acsl5 protein_coding protein_coding